SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 46316 46371 chr2L 46444 46499 12 127 4.5 6.5 5.5 1.8 183 chr2L 46316 intron Cda5 - chr2L 46408 intron Cda5 - chr2L 46499 intron Cda5 - chr2L_12_45001 chr2L_45001 RAL-109_125b 2 chr2L 47423 47434 chr2L 52578 52586 jockey 4 5154 8.0 7.5 7.8 0.5 5163 chr2L 47423 intron Cda5 - chr2L 50004 intron Cda5 - chr2L 52586 intron Cda5 - chr2L_4_50001 chr2L_50001 RAL-109_125b 3 chr2L 47439 47455 chr2L 52572 52610 jockey 6 5151 5.0 7.5 6.2 0.8 5171 chr2L 47439 intron Cda5 - chr2L 50024 intron Cda5 - chr2L 52610 intron Cda5 - chr2L_6_50001 chr2L_50001 RAL-109_125b 4 chr2L 89689 89730 chr2L 89806 89830 14 119 32.0 30.0 31.0 0.4 141 chr2L 89689 intergenic not near genes chr2L 89760 intergenic not near genes chr2L 89830 intergenic not near genes chr2L_14_85001 chr2L_85001 RAL-109_125b 5 chr2L 91165 91210 chr2L 91261 91301 4 105 24.5 24.0 24.2 0.2 136 chr2L 91165 intergenic not near genes chr2L 91233 intergenic not near genes chr2L 91301 intergenic not near genes chr2L_4_90001 chr2L_90001 RAL-109_125b 6 chr2L 119687 119761 chr2L 119814 119888 20 125 21.5 22.0 21.8 0.9 201 chr2L 119687 intron,intron CG11455 +,CG4822 - chr2L 119788 intron,intron CG11455 +,CG4822 - chr2L 119888 intron,exon CG11455 +,CG4822 - chr2L_20_115001 chr2L_115001 RAL-109_125b 7 chr2L 127450 127469 chr2L 127594 127614 5 143 22.5 16.0 19.2 0.2 164 chr2L 127450 intron,intron CG11455 +,CG3164 - chr2L 127532 intron,intron CG11455 +,CG3164 - chr2L 127614 intron,intron CG11455 +,CG3164 - chr2L_5_125001 chr2L_125001 RAL-109_125b 8 chr2L 127474 127514 chr2L 127593 127659 12 133 15.5 16.5 16.0 0.7 185 chr2L 127474 intron,intron CG11455 +,CG3164 - chr2L 127566 intron,intron CG11455 +,CG3164 - chr2L 127659 intron,intron CG11455 +,CG3164 - chr2L_12_125001 chr2L_125001 RAL-109_125b 9 chr2L 150716 150772 chr2L 150956 151026 16 252 24.0 30.0 27.0 0.6 310 chr2L 150716 intron,intron CG11455 +,CG42399 - chr2L 150871 intron,intron CG11455 +,CG42399 - chr2L 151026 intron,intron CG11455 +,CG42399 - chr2L_16_150001 chr2L_150001 RAL-109_125b 10 chr2L 163805 163862 chr2L 163943 163998 8 138 30.5 24.5 27.5 0.3 193 chr2L 163805 intron spen + chr2L 163902 intron spen + chr2L 163998 intron spen + chr2L_8_160001 chr2L_160001 RAL-109_125b 11 chr2L 172017 172083 chr2L 172143 172214 11 129 10.0 4.5 7.2 1.3 197 chr2L 172017 intron spen + chr2L 172116 intron spen + chr2L 172214 intron spen + chr2L_11_170001 chr2L_170001 RAL-109_125b 12 chr2L 179422 179482 chr2L 179555 179615 21 132 3.5 4.0 3.8 4.4 193 chr2L 179422 intron spen + chr2L 179518 intron spen + chr2L 179615 intron spen + chr2L_21_175001 chr2L_175001 RAL-109_125b 13 chr2L 180251 180322 chr2L 180469 180540 16 214 23.5 18.0 20.8 0.7 289 chr2L 180251 intron spen + chr2L 180396 intron spen + chr2L 180540 intron spen + chr2L_16_180001 chr2L_180001 RAL-109_125b 14 chr2L 263275 263511 chr2L 263471 263628 26 166 12.0 7.5 9.8 2.4 353 chr2L 263275 intron,3` UTR CG3645 -,CG17075 - chr2L 263452 intron,3` UTR CG3645 -,CG17075 - chr2L 263628 intron,3` UTR CG3645 -,CG17075 - chr2L_26_260001 chr2L_260001 RAL-109_125b 15 chr2L 297644 297713 chr2L 297794 297863 19 148 8.0 6.5 7.2 2.3 219 chr2L 297644 intergenic Hop +,Pi3K21B + chr2L 297754 intergenic Pi3K21B +,Hop + chr2L 297863 intergenic Pi3K21B +,Hop + chr2L_19_295001 chr2L_295001 RAL-109_125b 16 chr2L 314115 314144 chr2L 314211 314266 12 119 10.5 10.0 10.2 1.1 151 chr2L 314115 intron Plc21C + chr2L 314190 intron Plc21C + chr2L 314266 intron Plc21C + chr2L_12_310001 chr2L_310001 RAL-109_125b 17 chr2L 321752 321781 chr2L 321874 321914 6 128 23.5 24.5 24.0 0.2 162 chr2L 321752 intron Plc21C + chr2L 321833 intron Plc21C + chr2L 321914 intron Plc21C + chr2L_6_320001 chr2L_320001 RAL-109_125b 18 chr2L 325093 325117 chr2L 325220 325244 5 127 25.5 25.0 25.2 0.2 151 chr2L 325093 intron Plc21C + chr2L 325168 intron Plc21C + chr2L 325244 intron Plc21C + chr2L_5_325001 chr2L_325001 RAL-109_125b 19 chr2L 328190 328205 chr2L 328317 328332 9 124 26.0 26.5 26.2 0.3 142 chr2L 328190 intron,intron Plc21C +,CG43755 - chr2L 328261 intron,intron Plc21C +,CG43755 - chr2L 328332 intron,intron Plc21C +,CG43755 - chr2L_9_325001 chr2L_325001 RAL-109_125b 20 chr2L 328206 328225 chr2L 328312 328352 7 124 26.0 25.5 25.8 0.3 146 chr2L 328206 intron,intron Plc21C +,CG43755 - chr2L 328279 intron,intron Plc21C +,CG43755 - chr2L 328352 intron,intron Plc21C +,CG43755 - chr2L_7_325001 chr2L_325001 RAL-109_125b 21 chr2L 347848 347856 chr2L 355398 355406 blood 4 7549 19.0 4.5 11.8 0.3 7558 chr2L 347848 3` UTR Plc21C + chr2L 351627 intron Plc21C + chr2L 355406 3` UTR Plc21C + chr2L_4_350001 chr2L_350001 RAL-109_125b 22 chr2L 347858 347915 chr2L 355395 355409 blood 17 7544 10.5 4.0 7.2 2.1 7551 chr2L 347858 3` UTR Plc21C + chr2L 351634 intron Plc21C + chr2L 355409 3` UTR Plc21C + chr2L_17_350001 chr2L_350001 RAL-109_125b 23 chr2L 371398 371442 chr2L 371526 371570 8 129 9.5 7.0 8.2 0.9 172 chr2L 371398 intergenic not near genes chr2L 371484 intergenic not near genes chr2L 371570 intergenic not near genes chr2L_8_370001 chr2L_370001 RAL-109_125b 24 chr2L 373973 374036 chr2L 374138 374200 8 158 23.0 17.0 20.0 0.4 227 chr2L 373973 intergenic not near genes chr2L 374086 intergenic not near genes chr2L 374200 intergenic not near genes chr2L_8_370001 chr2L_370001 RAL-109_125b 25 chr2L 407899 407973 chr2L 408030 408104 27 129 6.5 10.5 8.5 2.8 205 chr2L 407899 3` UTR RpI135 + chr2L 408002 intergenic AP-2alpha -,RpI135 + chr2L 408104 3` UTR AP-2alpha - chr2L_27_405001 chr2L_405001 RAL-109_125b 26 chr2L 480933 480997 chr2L 481086 481150 11 148 31.0 28.0 29.5 0.4 217 chr2L 480933 intron ush + chr2L 481042 intron ush + chr2L 481150 intron ush + chr2L_11_480001 chr2L_480001 RAL-109_125b 27 chr2L 504582 504650 chr2L 504719 504748 13 131 21.5 21.5 21.5 0.6 166 chr2L 504582 intron ush + chr2L 504665 intron ush + chr2L 504748 intron ush + chr2L_13_500001 chr2L_500001 RAL-109_125b 28 chr2L 525205 525240 chr2L 525338 525373 9 133 22.0 22.0 22.0 0.4 168 chr2L 525205 intron ush + chr2L 525289 intron ush + chr2L 525373 intron ush + chr2L_9_525001 chr2L_525001 RAL-109_125b 29 chr2L 525248 525283 chr2L 525336 525393 9 121 20.5 22.0 21.2 0.4 145 chr2L 525248 intron ush + chr2L 525320 intron ush + chr2L 525393 5` UTR ush + chr2L_9_525001 chr2L_525001 RAL-109_125b 30 chr2L 544788 544851 chr2L 544921 544984 9 133 19.0 25.5 22.2 0.4 196 chr2L 544788 intergenic Spp -,Ets21C -,nAChRbeta3 + chr2L 544886 intergenic Ets21C -,Spp -,nAChRbeta3 + chr2L 544984 3` UTR Ets21C - chr2L_9_540001 chr2L_540001 RAL-109_125b 31 chr2L 590572 590641 chr2L 590723 590771 11 144 21.5 17.0 19.2 0.5 199 chr2L 590572 intron Gsc - chr2L 590672 intron Gsc - chr2L 590771 intron Gsc - chr2L_11_590001 chr2L_590001 RAL-109_125b 32 chr2L 630273 630324 chr2L 630414 630436 10 137 26.0 28.0 27.0 0.4 163 chr2L 630273 intergenic not near genes chr2L 630354 intergenic not near genes chr2L 630436 intergenic not near genes chr2L_10_630001 chr2L_630001 RAL-109_125b 33 chr2L 686920 686948 chr2L 695970 696018 roo 13 9078 8.0 10.5 9.2 1.3 9098 chr2L 686920 intron ds - chr2L 691469 intron ds - chr2L 696018 intron ds - chr2L_13_690001 chr2L_690001 RAL-109_125b 34 chr2L 727121 727194 chr2L 727248 727314 15 124 18.0 21.0 19.5 0.7 193 chr2L 727121 intergenic not near genes chr2L 727218 intergenic not near genes chr2L 727314 intergenic not near genes chr2L_15_725001 chr2L_725001 RAL-109_125b 35 chr2L 746554 746571 chr2L 746680 746697 4 126 9.5 12.5 11.0 0.3 143 chr2L 746554 intergenic not near genes chr2L 746626 intergenic not near genes chr2L 746697 intergenic not near genes chr2L_4_745001 chr2L_745001 RAL-109_125b 36 chr2L 747571 747621 chr2L 747701 747751 9 130 8.5 5.0 6.8 1.2 180 chr2L 747571 intergenic not near genes chr2L 747661 intergenic not near genes chr2L 747751 intergenic not near genes chr2L_9_745001 chr2L_745001 RAL-109_125b 37 chr2L 764514 764587 chr2L 764645 764718 13 130 23.5 25.0 24.2 0.5 204 chr2L 764514 intergenic not near genes chr2L 764616 intergenic not near genes chr2L 764718 intergenic not near genes chr2L_13_760001 chr2L_760001 RAL-109_125b 38 chr2L 770420 770432 chr2L 772251 772263 Bari1 4 1831 18.0 9.5 13.8 0.3 1843 chr2L 770420 intergenic not near genes chr2L 771342 intergenic not near genes chr2L 772263 intergenic CR44614 + chr2L_4_770001 chr2L_770001 RAL-109_125b 39 chr2L 770434 770483 chr2L 772250 772292 Bari1 20 1821 7.5 9.5 8.5 2.1 1858 chr2L 770434 intergenic not near genes chr2L 771363 intergenic not near genes chr2L 772292 intergenic CR44614 + chr2L_20_770001 chr2L_770001 RAL-109_125b 40 chr2L 776187 776246 chr2L 776385 776444 11 195 8.5 18.5 13.5 0.8 257 chr2L 776187 intergenic CG13946 + chr2L 776316 intergenic CG13946 + chr2L 776444 intergenic CG13946 + chr2L_11_775001 chr2L_775001 RAL-109_125b 41 chr2L 781030 781095 chr2L 781144 781189 8 126 14.5 16.0 15.2 0.5 159 chr2L 781030 5` UTR Gr21a + chr2L 781110 5` UTR Gr21a + chr2L 781189 5` UTR Gr21a + chr2L_8_780001 chr2L_780001 RAL-109_125b 42 chr2L 848568 848635 chr2L 848702 848769 13 131 26.0 25.0 25.5 0.5 201 chr2L 848568 intron drongo - chr2L 848668 intron drongo - chr2L 848769 intron drongo - chr2L_13_845001 chr2L_845001 RAL-109_125b 43 chr2L 877803 877875 chr2L 877928 877990 12 126 17.5 20.0 18.8 0.6 187 chr2L 877803 3` UTR,exon CG15824 -,ninaA + chr2L 877896 3` UTR,intron CG15824 -,ninaA + chr2L 877990 3` UTR,exon CG15824 -,ninaA + chr2L_12_875001 chr2L_875001 RAL-109_125b 44 chr2L 898348 898399 chr2L 898453 898465 13 112 19.0 20.5 19.8 0.6 117 chr2L 898348 intergenic Lsp1beta +,CR45348 - chr2L 898406 intergenic Lsp1beta +,CR45348 - chr2L 898465 intergenic Lsp1beta +,CR45348 - chr2L_13_895001 chr2L_895001 RAL-109_125b 45 chr2L 922415 922471 chr2L 922546 922602 8 126 19.0 16.5 17.8 0.4 187 chr2L 922415 intergenic CG4341 + chr2L 922508 intergenic CG4341 + chr2L 922602 intergenic CG4341 + chr2L_8_920001 chr2L_920001 RAL-109_125b 46 chr2L 923529 923597 chr2L 923663 923736 12 139 19.5 20.0 19.8 0.6 207 chr2L 923529 intron CG4341 + chr2L 923632 intron CG4341 + chr2L 923736 intron CG4341 + chr2L_12_920001 chr2L_920001 RAL-109_125b 47 chr2L 935911 935969 chr2L 936040 936083 8 126 8.5 12.0 10.2 0.7 172 chr2L 935911 intron CG4341 + chr2L 935997 intron CG4341 + chr2L 936083 intron CG4341 + chr2L_8_935001 chr2L_935001 RAL-109_125b 48 chr2L 976830 976903 chr2L 984516 984589 roo 18 7684 6.0 4.5 5.2 2.9 7759 chr2L 976830 intergenic not near genes chr2L 980710 intergenic not near genes chr2L 984589 intergenic not near genes chr2L_18_980001 chr2L_980001 RAL-109_125b 49 chr2L 996676 996747 chr2L 1005821 1005893 roo 14 9144 2.0 5.5 3.8 2.9 9217 chr2L 996676 intergenic not near genes chr2L 1001284 intergenic not near genes chr2L 1005893 intergenic not near genes chr2L_14_1000001 chr2L_1000001 RAL-109_125b 50 chr2L 1006769 1006838 chr2L 1006922 1006980 4 146 0.0 0.0 0.0 4.0 211 chr2L 1006769 intergenic not near genes chr2L 1006874 intergenic not near genes chr2L 1006980 intergenic not near genes chr2L_4_1005001 chr2L_1005001 RAL-109_125b 51 chr2L 1025070 1025087 chr2L 1025200 1025216 8 128 14.5 6.5 10.5 0.7 146 chr2L 1025070 intron IA-2 - chr2L 1025143 intron IA-2 - chr2L 1025216 intron IA-2 - chr2L_8_1025001 chr2L_1025001 RAL-109_125b 52 chr2L 1025094 1025119 chr2L 1025199 1025249 7 120 9.5 6.0 7.8 0.8 155 chr2L 1025094 intron IA-2 - chr2L 1025172 intron IA-2 - chr2L 1025249 intron IA-2 - chr2L_7_1025001 chr2L_1025001 RAL-109_125b 53 chr2L 1042577 1042634 chr2L 1042704 1042761 5 127 2.0 0.0 1.0 2.5 184 chr2L 1042577 intron IA-2 - chr2L 1042669 intron IA-2 - chr2L 1042761 intron IA-2 - chr2L_5_1040001 chr2L_1040001 RAL-109_125b 54 chr2L 1065277 1065339 chr2L 1065395 1065469 20 117 22.0 21.5 21.8 0.9 192 chr2L 1065277 intron S - chr2L 1065373 intron S - chr2L 1065469 intron S - chr2L_20_1065001 chr2L_1065001 RAL-109_125b 55 chr2L 1066059 1066123 chr2L 1066184 1066229 13 127 27.5 28.0 27.8 0.5 170 chr2L 1066059 intron S - chr2L 1066144 intron S - chr2L 1066229 intron S - chr2L_13_1065001 chr2L_1065001 RAL-109_125b 56 chr2L 1066638 1066677 chr2L 1066938 1066981 7 318 17.0 16.5 16.8 0.4 343 chr2L 1066638 intron S - chr2L 1066810 intron S - chr2L 1066981 intron S - chr2L_7_1065001 chr2L_1065001 RAL-109_125b 57 chr2L 1089935 1089997 chr2L 1090181 1090243 12 244 24.5 18.0 21.2 0.5 308 chr2L 1089935 intron CG4629 - chr2L 1090089 intron CG4629 - chr2L 1090243 intron CG4629 - chr2L_12_1090001 chr2L_1090001 RAL-109_125b 58 chr2L 1090332 1090380 chr2L 1090472 1090520 12 140 0.5 7.5 4.0 2.4 188 chr2L 1090332 intron CG4629 - chr2L 1090426 intron CG4629 - chr2L 1090520 intron CG4629 - chr2L_12_1090001 chr2L_1090001 RAL-109_125b 59 chr2L 1096338 1096408 chr2L 1096462 1096536 9 124 22.0 24.0 23.0 0.4 198 chr2L 1096338 intron CG4629 - chr2L 1096437 intron CG4629 - chr2L 1096536 intron CG4629 - chr2L_9_1095001 chr2L_1095001 RAL-109_125b 60 chr2L 1156845 1156894 chr2L 1157000 1157029 18 152 9.0 10.0 9.5 1.7 184 chr2L 1156845 intron capt - chr2L 1156937 intron capt - chr2L 1157029 intron capt - chr2L_18_1155001 chr2L_1155001 RAL-109_125b 61 chr2L 1159582 1159634 chr2L 1159708 1159746 12 124 23.0 23.5 23.2 0.5 164 chr2L 1159582 intron Tango14 + chr2L 1159664 intron Tango14 + chr2L 1159746 intron Tango14 + chr2L_12_1155001 chr2L_1155001 RAL-109_125b 62 chr2L 1182274 1182344 chr2L 1182400 1182471 20 126 31.5 32.0 31.8 0.6 197 chr2L 1182274 3` UTR CG4896 + chr2L 1182372 3` UTR,3` UTR CG4896 +,CG5126 - chr2L 1182471 3` UTR CG5126 - chr2L_20_1180001 chr2L_1180001 RAL-109_125b 63 chr2L 1186256 1186314 chr2L 1186362 1186412 7 114 20.5 17.5 19.0 0.3 156 chr2L 1186256 intron CG5001 + chr2L 1186334 intron CG5001 + chr2L 1186412 intron CG5001 + chr2L_7_1185001 chr2L_1185001 RAL-109_125b 64 chr2L 1192634 1192683 chr2L 1192787 1192835 12 151 9.5 16.5 13.0 0.9 201 chr2L 1192634 intron CG5001 + chr2L 1192734 intron CG5001 + chr2L 1192835 intron CG5001 + chr2L_12_1190001 chr2L_1190001 RAL-109_125b 65 chr2L 1199821 1199864 chr2L 1199979 1200022 4 158 18.0 23.5 20.8 0.2 201 chr2L 1199821 3` UTR CG43348 + chr2L 1199922 3` UTR CG43348 + chr2L 1200022 intergenic CG43348 +,CG43349 + chr2L_4_1195001 chr2L_1195001 RAL-109_125b 66 chr2L 1220099 1220103 chr2L 1227615 1227619 blood 4 7515 22.5 7.5 15.0 0.2 7520 chr2L 1220099 intron CG42329 + chr2L 1223859 intron CG42329 + chr2L 1227619 intron CG42329 + chr2L_4_1220001 chr2L_1220001 RAL-109_125b 67 chr2L 1220104 1220160 chr2L 1227606 1227649 blood 21 7510 8.5 6.5 7.5 2.5 7545 chr2L 1220104 intron CG42329 + chr2L 1223876 intron CG42329 + chr2L 1227649 intron CG42329 + chr2L_21_1220001 chr2L_1220001 RAL-109_125b 68 chr2L 1237935 1238004 chr2L 1238069 1238138 24 132 6.5 7.5 7.0 3.0 203 chr2L 1237935 intergenic not near genes chr2L 1238036 intergenic not near genes chr2L 1238138 intergenic not near genes chr2L_24_1235001 chr2L_1235001 RAL-109_125b 69 chr2L 1244363 1244433 chr2L 1244490 1244530 11 123 27.5 28.0 27.8 0.4 167 chr2L 1244363 intergenic not near genes chr2L 1244446 intergenic not near genes chr2L 1244530 intergenic not near genes chr2L_11_1240001 chr2L_1240001 RAL-109_125b 70 chr2L 1256963 1256971 chr2L 1257050 1257082 4 98 25.0 22.0 23.5 0.2 119 chr2L 1256963 intron robo3 + chr2L 1257022 intron robo3 + chr2L 1257082 intron robo3 + chr2L_4_1255001 chr2L_1255001 RAL-109_125b 71 chr2L 1261183 1261255 chr2L 1261314 1261386 18 128 1.0 5.5 3.2 4.3 203 chr2L 1261183 intron robo3 + chr2L 1261284 intron robo3 + chr2L 1261386 intron robo3 + chr2L_18_1260001 chr2L_1260001 RAL-109_125b 72 chr2L 1273770 1273789 chr2L 1274260 1274317 4 502 16.0 18.5 17.2 0.2 547 chr2L 1273770 exon robo3 + chr2L 1274044 intron robo3 + chr2L 1274317 intron robo3 + chr2L_4_1270001 chr2L_1270001 RAL-109_125b 73 chr2L 1300697 1300727 chr2L 1300836 1300867 8 138 22.5 17.5 20.0 0.4 170 chr2L 1300697 intergenic not near genes chr2L 1300782 intergenic not near genes chr2L 1300867 intergenic not near genes chr2L_8_1300001 chr2L_1300001 RAL-109_125b 74 chr2L 1300739 1300761 chr2L 1300828 1300901 5 126 16.5 17.5 17.0 0.3 162 chr2L 1300739 intergenic not near genes chr2L 1300820 intergenic not near genes chr2L 1300901 intergenic not near genes chr2L_5_1300001 chr2L_1300001 RAL-109_125b 75 chr2L 1312860 1312878 chr2L 1312959 1312999 5 117 16.5 20.5 18.5 0.3 139 chr2L 1312860 intergenic not near genes chr2L 1312930 intergenic not near genes chr2L 1312999 intergenic not near genes chr2L_5_1310001 chr2L_1310001 RAL-109_125b 76 chr2L 1320889 1320923 chr2L 1321043 1321077 6 154 5.5 3.0 4.2 1.2 188 chr2L 1320889 intergenic not near genes chr2L 1320983 intergenic not near genes chr2L 1321077 intergenic not near genes chr2L_6_1320001 chr2L_1320001 RAL-109_125b 77 chr2L 1321984 1322050 chr2L 1322123 1322179 14 138 15.5 16.0 15.8 0.8 195 chr2L 1321984 intergenic not near genes chr2L 1322082 intergenic not near genes chr2L 1322179 intergenic not near genes chr2L_14_1320001 chr2L_1320001 RAL-109_125b 78 chr2L 1332838 1332907 chr2L 1332977 1333046 16 135 17.5 21.5 19.5 0.8 208 chr2L 1332838 intergenic not near genes chr2L 1332942 intergenic not near genes chr2L 1333046 intergenic not near genes chr2L_16_1330001 chr2L_1330001 RAL-109_125b 79 chr2L 1336498 1336545 chr2L 1336637 1336678 5 138 18.0 12.0 15.0 0.3 180 chr2L 1336498 intergenic not near genes chr2L 1336588 intergenic not near genes chr2L 1336678 intergenic not near genes chr2L_5_1335001 chr2L_1335001 RAL-109_125b 80 chr2L 1379582 1379602 chr2L 1379689 1379709 7 118 11.5 14.0 12.8 0.5 127 chr2L 1379582 intergenic CR44898 - chr2L 1379646 intergenic CR44898 -,lea - chr2L 1379709 intergenic CR44898 -,lea - chr2L_7_1375001 chr2L_1375001 RAL-109_125b 81 chr2L 1407924 1407956 chr2L 1408065 1408104 7 147 12.5 14.5 13.5 0.5 180 chr2L 1407924 intron lea - chr2L 1408014 intron lea - chr2L 1408104 intron lea - chr2L_7_1405001 chr2L_1405001 RAL-109_125b 82 chr2L 1410257 1410308 chr2L 1410387 1410430 8 147 21.0 15.0 18.0 0.4 173 chr2L 1410257 intron lea - chr2L 1410344 intron lea - chr2L 1410430 intron lea - chr2L_8_1410001 chr2L_1410001 RAL-109_125b 83 chr2L 1415055 1415119 chr2L 1415347 1415398 14 291 17.0 15.0 16.0 0.8 343 chr2L 1415055 intron lea - chr2L 1415226 intron lea - chr2L 1415398 intron lea - chr2L_14_1415001 chr2L_1415001 RAL-109_125b 84 chr2L 1422350 1422368 chr2L 1422501 1422530 5 154 21.5 26.0 23.8 0.2 180 chr2L 1422350 intergenic not near genes chr2L 1422440 intergenic not near genes chr2L 1422530 intergenic not near genes chr2L_5_1420001 chr2L_1420001 RAL-109_125b 85 chr2L 1436588 1436656 chr2L 1436714 1436782 10 130 21.5 19.5 20.5 0.5 194 chr2L 1436588 intergenic not near genes chr2L 1436685 intergenic not near genes chr2L 1436782 intergenic not near genes chr2L_10_1435001 chr2L_1435001 RAL-109_125b 86 chr2L 1458202 1458254 chr2L 1458329 1458371 6 122 20.0 19.5 19.8 0.3 169 chr2L 1458202 intergenic not near genes chr2L 1458286 intergenic not near genes chr2L 1458371 intergenic not near genes chr2L_6_1455001 chr2L_1455001 RAL-109_125b 87 chr2L 1469175 1469228 chr2L 1469328 1469371 8 150 20.0 19.0 19.5 0.4 196 chr2L 1469175 intergenic not near genes chr2L 1469273 intergenic not near genes chr2L 1469371 intergenic not near genes chr2L_8_1465001 chr2L_1465001 RAL-109_125b 88 chr2L 1531080 1531135 chr2L 1531220 1531259 5 134 17.5 15.0 16.2 0.3 179 chr2L 1531080 intergenic not near genes chr2L 1531170 intergenic not near genes chr2L 1531259 intergenic not near genes chr2L_5_1530001 chr2L_1530001 RAL-109_125b 89 chr2L 1536444 1536523 chr2L 1536626 1536683 11 179 13.0 14.5 13.8 0.7 239 chr2L 1536444 intergenic not near genes chr2L 1536564 intergenic not near genes chr2L 1536683 intergenic not near genes chr2L_11_1535001 chr2L_1535001 RAL-109_125b 90 chr2L 1547503 1547568 chr2L 1547643 1547697 13 134 15.0 16.5 15.8 0.8 194 chr2L 1547503 intergenic not near genes chr2L 1547600 intergenic not near genes chr2L 1547697 intergenic not near genes chr2L_13_1545001 chr2L_1545001 RAL-109_125b 91 chr2L 1552622 1552691 chr2L 1552894 1552962 10 271 26.5 0.5 13.5 0.7 340 chr2L 1552622 intergenic not near genes chr2L 1552792 intergenic not near genes chr2L 1552962 intergenic not near genes chr2L_10_1550001 chr2L_1550001 RAL-109_125b 92 chr2L 1570649 1570715 chr2L 1573571 1573629 F-element 21 2920 9.0 11.0 10.0 1.9 2980 chr2L 1570649 intron haf + chr2L 1572139 intron haf + chr2L 1573629 intron haf + chr2L_21_1570001 chr2L_1570001 RAL-109_125b 93 chr2L 1580271 1580334 chr2L 1580529 1580592 11 258 14.5 17.0 15.8 0.7 321 chr2L 1580271 intron haf + chr2L 1580432 intron haf + chr2L 1580592 intron haf + chr2L_11_1580001 chr2L_1580001 RAL-109_125b 94 chr2L 1590917 1590975 chr2L 1591043 1591101 8 126 18.5 20.0 19.2 0.4 184 chr2L 1590917 intron haf + chr2L 1591009 intron haf + chr2L 1591101 intron haf + chr2L_8_1590001 chr2L_1590001 RAL-109_125b 95 chr2L 1615337 1615383 chr2L 1615470 1615483 4 124 18.0 20.0 19.0 0.2 146 chr2L 1615337 intergenic not near genes chr2L 1615410 intergenic not near genes chr2L 1615483 intergenic not near genes chr2L_4_1615001 chr2L_1615001 RAL-109_125b 96 chr2L 1618216 1618236 chr2L 1618596 1618616 jockey 6 378 3.0 9.5 6.2 0.8 400 chr2L 1618216 intergenic CR44603 - chr2L 1618416 intergenic CR44603 - chr2L 1618616 intergenic CR44603 - chr2L_6_1615001 chr2L_1615001 RAL-109_125b 97 chr2L 1622775 1622803 chr2L 1622905 1622913 8 131 21.5 13.0 17.2 0.4 138 chr2L 1622775 3` UTR CR44603 - chr2L 1622844 3` UTR CR44603 - chr2L 1622913 3` UTR CR44603 - chr2L_8_1620001 chr2L_1620001 RAL-109_125b 98 chr2L 1660718 1660766 chr2L 1660848 1660851 8 111 17.0 18.0 17.5 0.4 133 chr2L 1660718 intron chinmo + chr2L 1660784 intron chinmo + chr2L 1660851 intron chinmo + chr2L_8_1660001 chr2L_1660001 RAL-109_125b 99 chr2L 1661977 1662035 chr2L 1662112 1662161 10 138 16.5 15.0 15.8 0.6 184 chr2L 1661977 intron chinmo + chr2L 1662069 intron chinmo + chr2L 1662161 intron chinmo + chr2L_10_1660001 chr2L_1660001 RAL-109_125b 100 chr2L 1678925 1679009 chr2L 1686440 1686482 blood 16 7517 4.0 4.0 4.0 3.2 7557 chr2L 1678925 intron chinmo + chr2L 1682704 intron chinmo + chr2L 1686482 intron chinmo + chr2L_16_1680001 chr2L_1680001 RAL-109_125b 101 chr2L 1711312 1711346 chr2L 1711686 1711720 mdg3 12 372 12.5 8.5 10.5 1.0 408 chr2L 1711312 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711516 3` UTR frtz - chr2L 1711720 3` UTR frtz - chr2L_12_1710001 chr2L_1710001 RAL-109_125b 102 chr2L 1711347 1711379 chr2L 1711685 1711738 mdg3 10 357 7.5 8.0 7.8 1.1 391 chr2L 1711347 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711542 3` UTR frtz - chr2L 1711738 3` UTR frtz - chr2L_10_1710001 chr2L_1710001 RAL-109_125b 103 chr2L 1721819 1721853 chr2L 1721953 1721976 10 131 4.0 20.0 12.0 0.8 157 chr2L 1721819 intron Rim2 - chr2L 1721898 intron Rim2 - chr2L 1721976 intron Rim2 - chr2L_10_1720001 chr2L_1720001 RAL-109_125b 104 chr2L 1732819 1732882 chr2L 1733234 1733291 13 410 22.5 17.0 19.8 0.6 472 chr2L 1732819 intron CG17646 + chr2L 1733055 intron CG17646 + chr2L 1733291 intron CG17646 + chr2L_13_1730001 chr2L_1730001 RAL-109_125b 105 chr2L 1814363 1814375 chr2L 1814498 1814511 4 136 8.0 7.0 7.5 0.5 148 chr2L 1814363 intergenic not near genes chr2L 1814437 intergenic not near genes chr2L 1814511 intergenic not near genes chr2L_4_1810001 chr2L_1810001 RAL-109_125b 106 chr2L 1828497 1828512 chr2L 1828658 1828665 6 158 26.0 16.5 21.2 0.3 168 chr2L 1828497 intergenic not near genes chr2L 1828581 intergenic not near genes chr2L 1828665 intergenic not near genes chr2L_6_1825001 chr2L_1825001 RAL-109_125b 107 chr2L 1828514 1828559 chr2L 1828655 1828718 9 153 19.5 16.0 17.8 0.5 204 chr2L 1828514 intergenic not near genes chr2L 1828616 intergenic not near genes chr2L 1828718 intergenic not near genes chr2L_9_1825001 chr2L_1825001 RAL-109_125b 108 chr2L 1842251 1842297 chr2L 1842380 1842423 4 127 20.5 20.0 20.2 0.2 172 chr2L 1842251 intron wry + chr2L 1842337 intron wry + chr2L 1842423 intron wry + chr2L_4_1840001 chr2L_1840001 RAL-109_125b 109 chr2L 1852961 1852994 chr2L 1853048 1853150 4 139 12.5 10.5 11.5 0.3 189 chr2L 1852961 intron wry + chr2L 1853056 intron wry + chr2L 1853150 intron wry + chr2L_4_1850001 chr2L_1850001 RAL-109_125b 110 chr2L 1856225 1856255 chr2L 1856381 1856424 8 167 14.0 12.0 13.0 0.6 199 chr2L 1856225 intron wry + chr2L 1856324 intron wry + chr2L 1856424 intron wry + chr2L_8_1855001 chr2L_1855001 RAL-109_125b 111 chr2L 1878201 1878258 chr2L 1878374 1878432 11 172 19.5 21.0 20.2 0.5 231 chr2L 1878201 intron CG31663 - chr2L 1878316 intron CG31663 - chr2L 1878432 intron CG31663 - chr2L_11_1875001 chr2L_1875001 RAL-109_125b 112 chr2L 1883387 1883443 chr2L 1884019 1884089 12 636 1.5 2.5 2.0 4.0 702 chr2L 1883387 intron CG15358 - chr2L 1883738 exon CG15358 - chr2L 1884089 intergenic CG15358 - chr2L_12_1880001 chr2L_1880001 RAL-109_125b 113 chr2L 1888541 1888684 chr2L 1888691 1888823 29 144 8.5 10.5 9.5 2.8 282 chr2L 1888541 intron CG7337 + chr2L 1888682 intron CG7337 + chr2L 1888823 intron CG7337 + chr2L_29_1885001 chr2L_1885001 RAL-109_125b 114 chr2L 1925441 1925483 chr2L 1925568 1925610 9 122 21.5 24.0 22.8 0.4 169 chr2L 1925441 intron CG7337 + chr2L 1925526 intron CG7337 + chr2L 1925610 intron CG7337 + chr2L_9_1925001 chr2L_1925001 RAL-109_125b 115 chr2L 1994543 1994617 chr2L 1994822 1994882 16 277 25.0 20.0 22.5 0.7 339 chr2L 1994543 intergenic not near genes chr2L 1994712 intergenic not near genes chr2L 1994882 intergenic not near genes chr2L_16_1990001 chr2L_1990001 RAL-109_125b 116 chr2L 2012941 2012967 chr2L 2013068 2013094 6 126 6.5 7.5 7.0 0.8 153 chr2L 2012941 intron CG4238 + chr2L 2013018 intron CG4238 + chr2L 2013094 intron CG4238 + chr2L_6_2010001 chr2L_2010001 RAL-109_125b 117 chr2L 2016085 2016153 chr2L 2016215 2016283 9 127 15.0 17.5 16.2 0.5 198 chr2L 2016085 intron CG4238 + chr2L 2016184 intron CG4238 + chr2L 2016283 intron CG4238 + chr2L_9_2015001 chr2L_2015001 RAL-109_125b 118 chr2L 2061614 2061654 chr2L 2061740 2061753 10 118 21.0 19.0 20.0 0.5 139 chr2L 2061614 intron dpr3 - chr2L 2061684 intron dpr3 - chr2L 2061753 intron dpr3 - chr2L_10_2060001 chr2L_2060001 RAL-109_125b 119 chr2L 2100377 2100403 chr2L 2109548 2109551 roo 12 9175 7.5 8.5 8.0 1.3 9174 chr2L 2100377 intron dpr3 - chr2L 2104964 intron dpr3 - chr2L 2109551 intron dpr3 - chr2L_12_2100001 chr2L_2100001 RAL-109_125b 120 chr2L 2112091 2112131 chr2L 2119776 2119838 opus 8 7695 6.0 11.0 8.5 0.8 7747 chr2L 2112091 intergenic not near genes chr2L 2115964 intergenic not near genes chr2L 2119838 intergenic not near genes chr2L_8_2115001 chr2L_2115001 RAL-109_125b 121 chr2L 2121920 2121967 chr2L 2122121 2122166 6 200 21.5 24.0 22.8 0.3 246 chr2L 2121920 intergenic not near genes chr2L 2122043 intergenic not near genes chr2L 2122166 intergenic not near genes chr2L_6_2120001 chr2L_2120001 RAL-109_125b 122 chr2L 2204972 2205047 chr2L 2205395 2205470 17 420 19.5 23.5 21.5 0.8 498 chr2L 2204972 exon CG31668 - chr2L 2205221 intron CG31668 - chr2L 2205470 intron CG31668 - chr2L_17_2205001 chr2L_2205001 RAL-109_125b 123 chr2L 2207621 2207639 chr2L 2207749 2207770 6 128 24.0 21.5 22.8 0.3 149 chr2L 2207621 exon CG33124 - chr2L 2207696 exon CG33124 - chr2L 2207770 exon CG33124 - chr2L_6_2205001 chr2L_2205001 RAL-109_125b 124 chr2L 2207640 2207691 chr2L 2207748 2207819 13 119 18.0 21.0 19.5 0.6 179 chr2L 2207640 exon CG33124 - chr2L 2207730 exon CG33124 - chr2L 2207819 exon CG33124 - chr2L_13_2205001 chr2L_2205001 RAL-109_125b 125 chr2L 2250373 2250444 chr2L 2251190 2251270 13 816 21.5 15.5 18.5 0.7 897 chr2L 2250373 intergenic Ser12 - chr2L 2250822 exon Ser12 - chr2L 2251270 5` UTR Ser12 - chr2L_13_2250001 chr2L_2250001 RAL-109_125b 126 chr2L 2256403 2256475 chr2L 2256530 2256605 9 128 2.5 1.5 2.0 3.0 202 chr2L 2256403 intergenic not near genes chr2L 2256504 intergenic not near genes chr2L 2256605 intergenic not near genes chr2L_9_2255001 chr2L_2255001 RAL-109_125b 127 chr2L 2262261 2262341 chr2L 2262388 2262450 25 125 8.5 4.5 6.5 3.3 189 chr2L 2262261 intergenic not near genes chr2L 2262356 intergenic not near genes chr2L 2262450 intergenic not near genes chr2L_25_2260001 chr2L_2260001 RAL-109_125b 128 chr2L 2267834 2267884 chr2L 2267943 2268020 5 130 8.0 12.5 10.2 0.4 186 chr2L 2267834 intergenic CG17242 - chr2L 2267927 intergenic CG17242 - chr2L 2268020 intergenic CG17242 - chr2L_5_2265001 chr2L_2265001 RAL-109_125b 129 chr2L 2290559 2290610 chr2L 2290659 2290675 7 109 17.5 21.0 19.2 0.3 116 chr2L 2290559 exon robl22E - chr2L 2290617 exon robl22E - chr2L 2290675 intron robl22E - chr2L_7_2290001 chr2L_2290001 RAL-109_125b 130 chr2L 2293262 2293295 chr2L 2293388 2293426 6 130 19.5 19.5 19.5 0.3 164 chr2L 2293262 intergenic not near genes chr2L 2293344 intergenic not near genes chr2L 2293426 intergenic not near genes chr2L_6_2290001 chr2L_2290001 RAL-109_125b 131 chr2L 2294027 2294072 chr2L 2299244 2299296 copia 15 5227 4.0 4.5 4.2 2.9 5269 chr2L 2294027 intergenic not near genes chr2L 2296662 intergenic not near genes chr2L 2299296 intergenic not near genes chr2L_15_2295001 chr2L_2295001 RAL-109_125b 132 chr2L 2311020 2311092 chr2L 2311166 2311238 14 144 5.5 3.5 4.5 2.5 218 chr2L 2311020 intron CG9967 - chr2L 2311129 intron CG9967 - chr2L 2311238 intron CG9967 - chr2L_14_2310001 chr2L_2310001 RAL-109_125b 133 chr2L 2330826 2330880 chr2L 2330965 2331019 7 139 17.0 19.0 18.0 0.4 193 chr2L 2330826 intron,intron CG9967 -,eys + chr2L 2330922 intron,intron CG9967 -,eys + chr2L 2331019 intron,intron CG9967 -,eys + chr2L_7_2330001 chr2L_2330001 RAL-109_125b 134 chr2L 2342062 2342132 chr2L 2343908 2343962 14 1842 17.5 11.0 14.2 0.9 1900 chr2L 2342062 intron,intron CG9967 -,eys + chr2L 2343012 intron,intron CG9967 -,eys + chr2L 2343962 intron,intron CG9967 -,eys + chr2L_14_2340001 chr2L_2340001 RAL-109_125b 135 chr2L 2355260 2355271 chr2L 2355410 2355421 6 149 18.0 3.5 10.8 0.5 161 chr2L 2355260 intron,intron CG9967 -,eys + chr2L 2355340 intron,intron CG9967 -,eys + chr2L 2355421 intron,intron CG9967 -,eys + chr2L_6_2355001 chr2L_2355001 RAL-109_125b 136 chr2L 2372321 2372370 chr2L 2372457 2372506 9 136 21.0 20.5 20.8 0.4 185 chr2L 2372321 intergenic CG3609 - chr2L 2372414 intergenic CG3609 - chr2L 2372506 3` UTR CG3609 - chr2L_9_2370001 chr2L_2370001 RAL-109_125b 137 chr2L 2427337 2427391 chr2L 2427473 2427524 8 136 15.0 6.5 10.8 0.7 187 chr2L 2427337 3` UTR CR44912 - chr2L 2427430 3` UTR CR44912 - chr2L 2427524 3` UTR CR44912 - chr2L_8_2425001 chr2L_2425001 RAL-109_125b 138 chr2L 2497595 2497617 chr2L 2497721 2497743 10 126 5.5 10.0 7.8 1.1 148 chr2L 2497595 3` UTR oaf + chr2L 2497669 3` UTR oaf + chr2L 2497743 3` UTR oaf + chr2L_10_2495001 chr2L_2495001 RAL-109_125b 139 chr2L 2504185 2504236 chr2L 2504308 2504364 18 125 5.5 8.5 7.0 2.2 179 chr2L 2504185 intergenic not near genes chr2L 2504274 intergenic not near genes chr2L 2504364 intergenic not near genes chr2L_18_2500001 chr2L_2500001 RAL-109_125b 140 chr2L 2541398 2541473 chr2L 2541531 2541590 5 130 13.0 12.0 12.5 0.4 192 chr2L 2541398 intergenic not near genes chr2L 2541494 intergenic not near genes chr2L 2541590 intergenic not near genes chr2L_5_2540001 chr2L_2540001 RAL-109_125b 141 chr2L 2544485 2544502 chr2L 2544639 2544656 4 154 21.5 23.5 22.5 0.2 171 chr2L 2544485 intergenic not near genes chr2L 2544570 intergenic not near genes chr2L 2544656 intergenic not near genes chr2L_4_2540001 chr2L_2540001 RAL-109_125b 142 chr2L 2544504 2544549 chr2L 2544633 2544697 7 143 17.5 23.0 20.2 0.3 193 chr2L 2544504 intergenic not near genes chr2L 2544600 intergenic not near genes chr2L 2544697 intergenic not near genes chr2L_7_2540001 chr2L_2540001 RAL-109_125b 143 chr2L 2552698 2552761 chr2L 2552828 2552891 10 130 11.0 9.5 10.2 0.9 193 chr2L 2552698 exon CG3515 - chr2L 2552794 5` UTR CG3515 - chr2L 2552891 intergenic CG3515 - chr2L_10_2550001 chr2L_2550001 RAL-109_125b 144 chr2L 2565496 2565559 chr2L 2571614 2571682 297 9 6120 7.5 7.0 7.2 1.1 6186 chr2L 2565496 exon Cyp309a2 - chr2L 2568589 intron Cyp309a2 - chr2L 2571682 exon Cyp309a2 - chr2L_9_2565001 chr2L_2565001 RAL-109_125b 145 chr2L 2661157 2661235 chr2L 2663045 2663078 I-element 17 1863 4.5 9.5 7.0 2.1 1921 chr2L 2661157 intergenic not near genes chr2L 2662118 intergenic not near genes chr2L 2663078 intergenic not near genes chr2L_17_2660001 chr2L_2660001 RAL-109_125b 146 chr2L 2667586 2667600 chr2L 2667715 2667729 5 129 19.5 19.0 19.2 0.2 143 chr2L 2667586 intergenic not near genes chr2L 2667658 intergenic not near genes chr2L 2667729 intergenic not near genes chr2L_5_2665001 chr2L_2665001 RAL-109_125b 147 chr2L 2667603 2667648 chr2L 2667708 2667768 8 120 15.0 20.0 17.5 0.4 165 chr2L 2667603 intergenic not near genes chr2L 2667686 intergenic not near genes chr2L 2667768 intergenic not near genes chr2L_8_2665001 chr2L_2665001 RAL-109_125b 148 chr2L 2698806 2698883 chr2L 2698953 2699020 10 132 11.0 18.5 14.8 0.6 214 chr2L 2698806 intron CG31690 + chr2L 2698913 intron CG31690 + chr2L 2699020 intron CG31690 + chr2L_10_2695001 chr2L_2695001 RAL-109_125b 149 chr2L 2703396 2703439 chr2L 2703530 2703555 10 129 23.5 25.5 24.5 0.4 159 chr2L 2703396 intron CG31690 + chr2L 2703476 intron CG31690 + chr2L 2703555 intron CG31690 + chr2L_10_2700001 chr2L_2700001 RAL-109_125b 150 chr2L 2715639 2715698 chr2L 2715765 2715824 16 124 19.5 20.0 19.8 0.8 185 chr2L 2715639 intron CG31690 + chr2L 2715732 intron CG31690 + chr2L 2715824 intron CG31690 + chr2L_16_2715001 chr2L_2715001 RAL-109_125b 151 chr2L 2737863 2737916 chr2L 2737999 2738046 12 137 10.5 15.5 13.0 0.9 183 chr2L 2737863 exon CG31689 + chr2L 2737954 intron CG31689 + chr2L 2738046 intron CG31689 + chr2L_12_2735001 chr2L_2735001 RAL-109_125b 152 chr2L 2772579 2772615 chr2L 2779215 2779251 297 10 6634 11.5 15.5 13.5 0.7 6672 chr2L 2772579 3` UTR Syt1 - chr2L 2775915 intron Syt1 - chr2L 2779251 3` UTR Syt1 - chr2L_10_2775001 chr2L_2775001 RAL-109_125b 153 chr2L 2782898 2782933 chr2L 2783025 2783045 9 124 26.5 19.5 23.0 0.4 147 chr2L 2782898 intron Syt1 - chr2L 2782972 intron Syt1 - chr2L 2783045 3` UTR Syt1 - chr2L_9_2780001 chr2L_2780001 RAL-109_125b 154 chr2L 2800562 2800588 chr2L 2800694 2800709 7 131 22.5 15.0 18.8 0.4 147 chr2L 2800562 intergenic not near genes chr2L 2800636 intergenic not near genes chr2L 2800709 intergenic not near genes chr2L_7_2800001 chr2L_2800001 RAL-109_125b 155 chr2L 2826493 2826574 chr2L 2826635 2826709 12 134 13.5 21.0 17.2 0.7 216 chr2L 2826493 intron Duox - chr2L 2826601 intron Duox - chr2L 2826709 intron Duox - chr2L_12_2825001 chr2L_2825001 RAL-109_125b 156 chr2L 2830370 2830416 chr2L 2830549 2830596 7 180 13.0 12.0 12.5 0.5 226 chr2L 2830370 intergenic Duox - chr2L 2830483 intergenic Duox - chr2L 2830596 intergenic Duox - chr2L_7_2830001 chr2L_2830001 RAL-109_125b 157 chr2L 2831032 2831092 chr2L 2831188 2831247 7 156 19.0 11.5 15.2 0.4 215 chr2L 2831032 intergenic not near genes chr2L 2831140 intergenic not near genes chr2L 2831247 intergenic not near genes chr2L_7_2830001 chr2L_2830001 RAL-109_125b 158 chr2L 2885331 2885389 chr2L 2885458 2885476 13 123 16.0 9.5 12.8 0.9 145 chr2L 2885331 intron NTPase - chr2L 2885404 intron NTPase - chr2L 2885476 intron NTPase - chr2L_13_2885001 chr2L_2885001 RAL-109_125b 159 chr2L 2891207 2891272 chr2L 2891583 2891605 6 369 11.5 21.5 16.5 0.3 398 chr2L 2891207 intron lilli + chr2L 2891406 intron lilli + chr2L 2891605 intron lilli + chr2L_6_2890001 chr2L_2890001 RAL-109_125b 160 chr2L 2933252 2933305 chr2L 2935479 2935537 pogo 11 2230 24.0 19.0 21.5 0.5 2285 chr2L 2933252 intron lilli + chr2L 2934394 intron lilli + chr2L 2935537 intron lilli + chr2L_11_2930001 chr2L_2930001 RAL-109_125b 161 chr2L 2937376 2937443 chr2L 2937503 2937570 7 124 17.5 11.0 14.2 0.5 194 chr2L 2937376 intron lilli + chr2L 2937473 intron lilli + chr2L 2937570 intron lilli + chr2L_7_2935001 chr2L_2935001 RAL-109_125b 162 chr2L 2939985 2940007 chr2L 2940224 2940246 6 237 22.0 22.0 22.0 0.3 261 chr2L 2939985 intron lilli + chr2L 2940116 intron lilli + chr2L 2940246 intron lilli + chr2L_6_2940001 chr2L_2940001 RAL-109_125b 163 chr2L 2940023 2940043 chr2L 2940223 2940264 6 225 19.0 22.0 20.5 0.3 241 chr2L 2940023 intron lilli + chr2L 2940144 intron lilli + chr2L 2940264 intron lilli + chr2L_6_2940001 chr2L_2940001 RAL-109_125b 164 chr2L 2964263 2964306 chr2L 2964391 2964434 6 124 14.5 11.5 13.0 0.4 171 chr2L 2964263 3` UTR Rbp9 + chr2L 2964348 3` UTR Rbp9 + chr2L 2964434 3` UTR Rbp9 + chr2L_6_2960001 chr2L_2960001 RAL-109_125b 165 chr2L 3072998 3073049 chr2L 3078241 3078302 copia 15 5257 6.5 12.0 9.2 1.5 5304 chr2L 3072998 intron toc - chr2L 3075650 intron toc - chr2L 3078302 intron toc - chr2L_15_3075001 chr2L_3075001 RAL-109_125b 166 chr2L 3095378 3095452 chr2L 3095505 3095550 13 125 22.0 17.0 19.5 0.6 172 chr2L 3095378 intron toc - chr2L 3095464 intron toc - chr2L 3095550 intron toc - chr2L_13_3095001 chr2L_3095001 RAL-109_125b 167 chr2L 3097602 3097653 chr2L 3097733 3097784 4 131 27.0 18.5 22.8 0.2 182 chr2L 3097602 intron toc - chr2L 3097693 intron toc - chr2L 3097784 intron toc - chr2L_4_3095001 chr2L_3095001 RAL-109_125b 168 chr2L 3108841 3108895 chr2L 3108968 3109022 22 123 5.0 7.5 6.2 3.1 181 chr2L 3108841 exon toc - chr2L 3108932 intron toc - chr2L 3109022 intron toc - chr2L_22_3105001 chr2L_3105001 RAL-109_125b 169 chr2L 3115299 3115353 chr2L 3115428 3115482 7 135 12.5 12.5 12.5 0.5 183 chr2L 3115299 intron toc - chr2L 3115390 intron toc - chr2L 3115482 intron toc - chr2L_7_3115001 chr2L_3115001 RAL-109_125b 170 chr2L 3181252 3181303 chr2L 3181388 3181439 8 136 12.0 5.5 8.8 0.8 187 chr2L 3181252 intron CG34393 - chr2L 3181346 intron CG34393 - chr2L 3181439 intron CG34393 - chr2L_8_3180001 chr2L_3180001 RAL-109_125b 171 chr2L 3192168 3192179 chr2L 3192329 3192340 5 161 20.5 13.5 17.0 0.3 172 chr2L 3192168 exon CG34393 - chr2L 3192254 intron CG34393 - chr2L 3192340 intron CG34393 - chr2L_5_3190001 chr2L_3190001 RAL-109_125b 172 chr2L 3192182 3192236 chr2L 3192318 3192393 22 154 8.5 10.5 9.5 2.1 211 chr2L 3192182 exon CG34393 - chr2L 3192288 intron CG34393 - chr2L 3192393 intron CG34393 - chr2L_22_3190001 chr2L_3190001 RAL-109_125b 173 chr2L 3202699 3202743 chr2L 3210176 3210222 mdg1 8 7479 7.0 0.0 3.5 1.8 7523 chr2L 3202699 intergenic not near genes chr2L 3206460 intergenic not near genes chr2L 3210222 intergenic CR45336 + chr2L_8_3205001 chr2L_3205001 RAL-109_125b 174 chr2L 3233590 3233656 chr2L 3233791 3233857 6 200 23.5 22.5 23.0 0.2 267 chr2L 3233590 intergenic not near genes chr2L 3233724 intergenic not near genes chr2L 3233857 intergenic not near genes chr2L_6_3230001 chr2L_3230001 RAL-109_125b 175 chr2L 3251467 3251492 chr2L 3259082 3259107 springer 10 7615 9.5 9.0 9.2 1.0 7640 chr2L 3251467 intergenic not near genes chr2L 3255287 intergenic not near genes chr2L 3259107 intergenic not near genes chr2L_10_3255001 chr2L_3255001 RAL-109_125b 176 chr2L 3251494 3251521 chr2L 3259070 3259136 springer 8 7605 3.5 6.5 5.0 1.3 7642 chr2L 3251494 intergenic not near genes chr2L 3255315 intergenic not near genes chr2L 3259136 intergenic not near genes chr2L_8_3255001 chr2L_3255001 RAL-109_125b 177 chr2L 3261462 3261504 chr2L 3261604 3261646 9 142 17.0 27.0 22.0 0.4 184 chr2L 3261462 intergenic CR45338 -,CR45337 - chr2L 3261554 intergenic CR45338 -,CR45337 - chr2L 3261646 3` UTR CR45338 - chr2L_9_3260001 chr2L_3260001 RAL-109_125b 178 chr2L 3262623 3262685 chr2L 3262863 3262931 10 245 15.5 15.0 15.2 0.6 308 chr2L 3262623 intergenic not near genes chr2L 3262777 intergenic not near genes chr2L 3262931 intergenic not near genes chr2L_10_3260001 chr2L_3260001 RAL-109_125b 179 chr2L 3267562 3267606 chr2L 3267703 3267747 8 141 14.5 8.5 11.5 0.6 185 chr2L 3267562 intergenic not near genes chr2L 3267654 intergenic not near genes chr2L 3267747 intergenic not near genes chr2L_8_3265001 chr2L_3265001 RAL-109_125b 180 chr2L 3272927 3272968 chr2L 3273049 3273094 6 125 10.0 15.5 12.8 0.4 167 chr2L 3272927 intergenic not near genes chr2L 3273010 intergenic not near genes chr2L 3273094 intergenic not near genes chr2L_6_3270001 chr2L_3270001 RAL-109_125b 181 chr2L 3282619 3282694 chr2L 3282759 3282835 8 141 23.5 21.5 22.5 0.3 216 chr2L 3282619 intergenic not near genes chr2L 3282727 intergenic not near genes chr2L 3282835 intergenic not near genes chr2L_8_3280001 chr2L_3280001 RAL-109_125b 182 chr2L 3287397 3287422 chr2L 3287532 3287536 4 129 19.0 34.5 26.8 0.1 139 chr2L 3287397 intergenic CR44485 + chr2L 3287466 intergenic CR44485 + chr2L 3287536 intergenic CR44485 + chr2L_4_3285001 chr2L_3285001 RAL-109_125b 183 chr2L 3291206 3291242 chr2L 3291336 3291357 9 128 8.0 10.5 9.2 0.9 151 chr2L 3291206 intergenic CG9664 - chr2L 3291282 3` UTR CG9664 - chr2L 3291357 3` UTR CG9664 - chr2L_9_3290001 chr2L_3290001 RAL-109_125b 184 chr2L 3291245 3291271 chr2L 3291329 3291396 15 119 7.5 10.0 8.8 1.5 151 chr2L 3291245 3` UTR CG9664 - chr2L 3291320 3` UTR CG9664 - chr2L 3291396 3` UTR CG9664 - chr2L_15_3290001 chr2L_3290001 RAL-109_125b 185 chr2L 3323211 3323271 chr2L 3323368 3323419 10 154 20.0 14.5 17.2 0.5 208 chr2L 3323211 intergenic CG8837 + chr2L 3323315 intergenic CG8837 + chr2L 3323419 intergenic CG8837 + chr2L_10_3320001 chr2L_3320001 RAL-109_125b 186 chr2L 3356637 3356690 chr2L 3356786 3356828 9 145 18.0 16.5 17.2 0.5 191 chr2L 3356637 intergenic not near genes chr2L 3356732 intergenic not near genes chr2L 3356828 intergenic not near genes chr2L_9_3355001 chr2L_3355001 RAL-109_125b 187 chr2L 3388561 3388620 chr2L 3388852 3388911 pogo 23 290 7.5 10.0 8.8 2.3 350 chr2L 3388561 intergenic CG42460 - chr2L 3388736 intergenic CG42460 - chr2L 3388911 intergenic CG42460 -,CR44791 + chr2L_23_3385001 chr2L_3385001 RAL-109_125b 188 chr2L 3393480 3393750 chr2L 3393608 3393870 15 128 24.0 21.0 22.5 0.6 390 chr2L 3393480 intergenic not near genes chr2L 3393675 intergenic not near genes chr2L 3393870 intergenic not near genes chr2L_15_3390001 chr2L_3390001 RAL-109_125b 189 chr2L 3393788 3393801 chr2L 3393868 3393926 5 112 17.5 20.0 18.8 0.3 138 chr2L 3393788 intergenic not near genes chr2L 3393857 intergenic not near genes chr2L 3393926 intergenic not near genes chr2L_5_3390001 chr2L_3390001 RAL-109_125b 190 chr2L 3418307 3418352 chr2L 3418445 3418525 12 191 14.0 20.5 17.2 0.7 218 chr2L 3418307 intron pgant2 - chr2L 3418416 intron pgant2 - chr2L 3418525 intron pgant2 - chr2L_12_3415001 chr2L_3415001 RAL-109_125b 191 chr2L 3439378 3439449 chr2L 3439515 3439586 14 133 21.5 21.5 21.5 0.6 208 chr2L 3439378 intergenic not near genes chr2L 3439482 intergenic not near genes chr2L 3439586 intergenic not near genes chr2L_14_3435001 chr2L_3435001 RAL-109_125b 192 chr2L 3480447 3480488 chr2L 3480576 3480617 6 128 12.0 4.0 8.0 0.7 170 chr2L 3480447 intergenic CG15414 - chr2L 3480532 intergenic CG15414 - chr2L 3480617 intergenic CG15414 - chr2L_6_3480001 chr2L_3480001 RAL-109_125b 193 chr2L 3494384 3494398 chr2L 3494557 3494569 5 171 25.0 20.0 22.5 0.2 185 chr2L 3494384 3` UTR tim - chr2L 3494476 3` UTR tim - chr2L 3494569 3` UTR tim - chr2L_5_3490001 chr2L_3490001 RAL-109_125b 194 chr2L 3494400 3494434 chr2L 3494550 3494607 4 166 24.0 19.5 21.8 0.2 207 chr2L 3494400 3` UTR tim - chr2L 3494504 3` UTR tim - chr2L 3494607 3` UTR tim - chr2L_4_3490001 chr2L_3490001 RAL-109_125b 195 chr2L 3498691 3498744 chr2L 3498818 3498871 8 127 19.0 20.5 19.8 0.4 180 chr2L 3498691 intron tim - chr2L 3498781 intron tim - chr2L 3498871 intron tim - chr2L_8_3495001 chr2L_3495001 RAL-109_125b 196 chr2L 3505398 3505430 chr2L 3505545 3505571 6 146 20.5 9.5 15.0 0.4 173 chr2L 3505398 intron tim - chr2L 3505484 intron tim - chr2L 3505571 intron tim - chr2L_6_3505001 chr2L_3505001 RAL-109_125b 197 chr2L 3505433 3505463 chr2L 3505544 3505605 8 139 18.0 9.0 13.5 0.6 172 chr2L 3505433 intron tim - chr2L 3505519 intron tim - chr2L 3505605 intron tim - chr2L_8_3505001 chr2L_3505001 RAL-109_125b 198 chr2L 3508298 3508370 chr2L 3508426 3508498 29 128 4.5 10.5 7.5 3.4 200 chr2L 3508298 intergenic tim -,CR45299 + chr2L 3508398 intergenic CR45299 +,tim - chr2L 3508498 intergenic CR45299 +,tim - chr2L_29_3505001 chr2L_3505001 RAL-109_125b 199 chr2L 3510351 3510413 chr2L 3510483 3510545 21 130 22.5 22.0 22.2 0.9 194 chr2L 3510351 3` UTR CG33123 - chr2L 3510448 3` UTR CG33123 - chr2L 3510545 3` UTR CG33123 - chr2L_21_3510001 chr2L_3510001 RAL-109_125b 200 chr2L 3582831 3582846 chr2L 3582958 3582973 7 127 19.5 25.0 22.2 0.3 142 chr2L 3582831 intergenic not near genes chr2L 3582902 intergenic not near genes chr2L 3582973 intergenic not near genes chr2L_7_3580001 chr2L_3580001 RAL-109_125b 201 chr2L 3634062 3634125 chr2L 3634194 3634257 16 132 10.5 18.5 14.5 1.0 195 chr2L 3634062 intron for - chr2L 3634160 intron for - chr2L 3634257 exon for - chr2L_16_3630001 chr2L_3630001 RAL-109_125b 202 chr2L 3649735 3649806 chr2L 3654992 3655058 copia 17 5250 3.0 6.5 4.8 2.9 5323 chr2L 3649735 intron for - chr2L 3652396 intron for - chr2L 3655058 intron for - chr2L_17_3650001 chr2L_3650001 RAL-109_125b 203 chr2L 3663268 3663336 chr2L 3663397 3663465 30 127 6.5 7.5 7.0 3.8 197 chr2L 3663268 5` UTR CG34340 + chr2L 3663366 intron CG34340 + chr2L 3663465 intron CG34340 + chr2L_30_3660001 chr2L_3660001 RAL-109_125b 204 chr2L 3685979 3686053 chr2L 3686117 3686191 16 137 12.5 11.0 11.8 1.2 212 chr2L 3685979 intron CG34340 + chr2L 3686085 intron CG34340 + chr2L 3686191 intron CG34340 + chr2L_16_3685001 chr2L_3685001 RAL-109_125b 205 chr2L 3688867 3688898 chr2L 3688999 3689030 11 129 8.5 1.5 5.0 1.8 163 chr2L 3688867 intron CG34340 + chr2L 3688948 intron CG34340 + chr2L 3689030 intron CG34340 + chr2L_11_3685001 chr2L_3685001 RAL-109_125b 206 chr2L 3732277 3732327 chr2L 3732410 3732466 7 132 17.5 19.0 18.2 0.4 189 chr2L 3732277 intron CG10019 + chr2L 3732372 intron CG10019 + chr2L 3732466 intron CG10019 + chr2L_7_3730001 chr2L_3730001 RAL-109_125b 207 chr2L 3792444 3792482 chr2L 3792585 3792623 15 140 27.5 25.5 26.5 0.5 179 chr2L 3792444 intron CG3921 + chr2L 3792534 intron CG3921 + chr2L 3792623 exon CG3921 + chr2L_15_3790001 chr2L_3790001 RAL-109_125b 208 chr2L 3814573 3814642 chr2L 3814703 3814772 12 126 7.5 6.0 6.8 1.5 199 chr2L 3814573 intergenic not near genes chr2L 3814672 intergenic not near genes chr2L 3814772 intergenic not near genes chr2L_12_3810001 chr2L_3810001 RAL-109_125b 209 chr2L 3836975 3837005 chr2L 3837108 3837138 4 133 16.5 16.0 16.2 0.2 163 chr2L 3836975 5` UTR slp2 + chr2L 3837056 5` UTR slp2 + chr2L 3837138 5` UTR slp2 + chr2L_4_3835001 chr2L_3835001 RAL-109_125b 210 chr2L 3846786 3846816 chr2L 3846906 3846935 7 118 11.5 15.0 13.2 0.5 149 chr2L 3846786 intergenic not near genes chr2L 3846860 intergenic not near genes chr2L 3846935 intergenic not near genes chr2L_7_3845001 chr2L_3845001 RAL-109_125b 211 chr2L 3891859 3891915 chr2L 3891994 3892050 11 131 19.5 19.5 19.5 0.5 191 chr2L 3891859 intron capu - chr2L 3891954 intron capu - chr2L 3892050 intron capu - chr2L_11_3890001 chr2L_3890001 RAL-109_125b 212 chr2L 3893093 3893106 chr2L 3893227 3893240 8 133 6.5 7.5 7.0 1.0 147 chr2L 3893093 intron capu - chr2L 3893166 intron capu - chr2L 3893240 intron capu - chr2L_8_3890001 chr2L_3890001 RAL-109_125b 213 chr2L 3895298 3895353 chr2L 3895437 3895492 10 139 11.0 14.5 12.8 0.7 194 chr2L 3895298 intron capu - chr2L 3895395 intron capu - chr2L 3895492 intron capu - chr2L_10_3895001 chr2L_3895001 RAL-109_125b 214 chr2L 3898219 3898308 chr2L 3898353 3898436 17 129 1.5 7.5 4.5 3.1 217 chr2L 3898219 intron capu - chr2L 3898328 intron capu - chr2L 3898436 intron capu - chr2L_17_3895001 chr2L_3895001 RAL-109_125b 215 chr2L 3936575 3936653 chr2L 3936704 3936783 8 128 1.0 4.0 2.5 2.3 208 chr2L 3936575 intron fred - chr2L 3936679 intron fred - chr2L 3936783 intron fred - chr2L_8_3935001 chr2L_3935001 RAL-109_125b 216 chr2L 3938330 3938343 chr2L 3938468 3938481 7 138 4.5 0.0 2.2 2.2 151 chr2L 3938330 intron fred - chr2L 3938406 intron fred - chr2L 3938481 intron fred - chr2L_7_3935001 chr2L_3935001 RAL-109_125b 217 chr2L 3943784 3943815 chr2L 3943924 3943956 10 141 16.5 20.5 18.5 0.5 172 chr2L 3943784 intron fred - chr2L 3943870 intron fred - chr2L 3943956 intron fred - chr2L_10_3940001 chr2L_3940001 RAL-109_125b 218 chr2L 3985926 3985984 chr2L 3986054 3986112 7 126 13.0 17.5 15.2 0.4 186 chr2L 3985926 intron fred - chr2L 3986019 intron fred - chr2L 3986112 intron fred - chr2L_7_3985001 chr2L_3985001 RAL-109_125b 219 chr2L 4007267 4007296 chr2L 4007409 4007438 8 142 5.5 6.5 6.0 1.1 171 chr2L 4007267 intergenic CG43773 + chr2L 4007352 intergenic CG43773 + chr2L 4007438 intergenic CG43773 + chr2L_8_4005001 chr2L_4005001 RAL-109_125b 220 chr2L 4008226 4008289 chr2L 4008361 4008424 13 135 15.5 16.0 15.8 0.8 198 chr2L 4008226 intergenic CG43773 +,CG43774 + chr2L 4008325 intergenic CG43774 +,CG43773 + chr2L 4008424 intergenic CG43774 +,CG43773 + chr2L_13_4005001 chr2L_4005001 RAL-109_125b 221 chr2L 4011461 4011515 chr2L 4011618 4011652 10 155 22.5 10.0 16.2 0.6 191 chr2L 4011461 intergenic not near genes chr2L 4011556 intergenic not near genes chr2L 4011652 intergenic not near genes chr2L_10_4010001 chr2L_4010001 RAL-109_125b 222 chr2L 4037753 4037804 chr2L 4037890 4037941 16 137 6.5 5.5 6.0 2.3 188 chr2L 4037753 intron ed + chr2L 4037847 intron ed + chr2L 4037941 intron ed + chr2L_16_4035001 chr2L_4035001 RAL-109_125b 223 chr2L 4047037 4047069 chr2L 4047400 4047432 5 363 10.0 14.0 12.0 0.4 395 chr2L 4047037 intron ed + chr2L 4047234 intron ed + chr2L 4047432 intron ed + chr2L_5_4045001 chr2L_4045001 RAL-109_125b 224 chr2L 4047072 4047087 chr2L 4047397 4047450 4 344 9.5 14.0 11.8 0.3 378 chr2L 4047072 intron ed + chr2L 4047261 intron ed + chr2L 4047450 intron ed + chr2L_4_4045001 chr2L_4045001 RAL-109_125b 225 chr2L 4048865 4048912 chr2L 4049004 4049052 10 138 19.5 23.0 21.2 0.5 187 chr2L 4048865 intron ed + chr2L 4048958 intron ed + chr2L 4049052 intron ed + chr2L_10_4045001 chr2L_4045001 RAL-109_125b 226 chr2L 4054532 4054546 chr2L 4054642 4054685 5 131 6.5 8.0 7.2 0.6 153 chr2L 4054532 intron ed + chr2L 4054608 intron ed + chr2L 4054685 intron ed + chr2L_5_4050001 chr2L_4050001 RAL-109_125b 227 chr2L 4060127 4060194 chr2L 4060253 4060320 6 126 21.5 17.0 19.2 0.3 193 chr2L 4060127 intron ed + chr2L 4060224 intron ed + chr2L 4060320 intron ed + chr2L_6_4060001 chr2L_4060001 RAL-109_125b 228 chr2L 4066001 4066057 chr2L 4068876 4068900 Juan 14 2870 6.5 8.0 7.2 1.7 2899 chr2L 4066001 intron ed + chr2L 4067450 intron ed + chr2L 4068900 intron ed + chr2L_14_4065001 chr2L_4065001 RAL-109_125b 229 chr2L 4092380 4092429 chr2L 4092507 4092556 11 127 9.0 14.0 11.5 0.9 176 chr2L 4092380 intron ed + chr2L 4092468 intron ed + chr2L 4092556 intron ed + chr2L_11_4090001 chr2L_4090001 RAL-109_125b 230 chr2L 4104590 4104621 chr2L 4104800 4104831 5 206 24.0 16.0 20.0 0.2 241 chr2L 4104590 intron ed + chr2L 4104710 intron ed + chr2L 4104831 intron ed + chr2L_5_4100001 chr2L_4100001 RAL-109_125b 231 chr2L 4104637 4104648 chr2L 4104799 4104858 5 183 19.5 16.5 18.0 0.3 221 chr2L 4104637 intron ed + chr2L 4104748 intron ed + chr2L 4104858 intron ed + chr2L_5_4100001 chr2L_4100001 RAL-109_125b 232 chr2L 4109920 4109928 chr2L 4110054 4110062 4 134 6.0 13.0 9.5 0.4 142 chr2L 4109920 intron ed + chr2L 4109991 intron ed + chr2L 4110062 intron ed + chr2L_4_4105001 chr2L_4105001 RAL-109_125b 233 chr2L 4117744 4117764 chr2L 4117869 4117879 4 128 18.0 21.5 19.8 0.2 135 chr2L 4117744 intergenic not near genes chr2L 4117812 intergenic not near genes chr2L 4117879 intergenic not near genes chr2L_4_4115001 chr2L_4115001 RAL-109_125b 234 chr2L 4147925 4147958 chr2L 4148051 4148084 7 126 7.5 4.5 6.0 1.0 159 chr2L 4147925 intergenic not near genes chr2L 4148004 intergenic not near genes chr2L 4148084 intergenic not near genes chr2L_7_4145001 chr2L_4145001 RAL-109_125b 235 chr2L 4150614 4150651 chr2L 4150744 4150781 5 130 11.5 18.0 14.8 0.3 167 chr2L 4150614 exon CG2955 + chr2L 4150698 exon CG2955 + chr2L 4150781 exon CG2955 + chr2L_5_4150001 chr2L_4150001 RAL-109_125b 236 chr2L 4166337 4166392 chr2L 4166465 4166525 18 128 18.5 18.5 18.5 0.9 188 chr2L 4166337 intergenic Or24a - chr2L 4166431 intergenic Or24a - chr2L 4166525 intergenic Or24a - chr2L_18_4165001 chr2L_4165001 RAL-109_125b 237 chr2L 4171463 4171496 chr2L 4171574 4171597 4 107 18.0 14.5 16.2 0.2 134 chr2L 4171463 intergenic not near genes chr2L 4171530 intergenic not near genes chr2L 4171597 intergenic not near genes chr2L_4_4170001 chr2L_4170001 RAL-109_125b 238 chr2L 4180095 4180132 chr2L 4180221 4180258 11 125 3.5 9.0 6.2 1.5 163 chr2L 4180095 intergenic not near genes chr2L 4180176 intergenic not near genes chr2L 4180258 intergenic not near genes chr2L_11_4180001 chr2L_4180001 RAL-109_125b 239 chr2L 4184428 4184501 chr2L 4184797 4184870 19 368 5.5 3.5 4.5 3.5 442 chr2L 4184428 intergenic not near genes chr2L 4184649 intergenic not near genes chr2L 4184870 intergenic not near genes chr2L_19_4180001 chr2L_4180001 RAL-109_125b 240 chr2L 4195081 4195100 chr2L 4195217 4195235 5 135 20.5 11.0 15.8 0.3 154 chr2L 4195081 exon CG3714 - chr2L 4195158 intron CG3714 - chr2L 4195235 intron CG3714 - chr2L_5_4195001 chr2L_4195001 RAL-109_125b 241 chr2L 4243660 4243727 chr2L 4243801 4243868 9 136 16.5 18.5 17.5 0.5 208 chr2L 4243660 intergenic not near genes chr2L 4243764 intergenic not near genes chr2L 4243868 intergenic not near genes chr2L_9_4240001 chr2L_4240001 RAL-109_125b 242 chr2L 4244022 4244048 chr2L 4244151 4244177 7 129 8.0 14.5 11.2 0.6 155 chr2L 4244022 intergenic not near genes chr2L 4244100 intergenic not near genes chr2L 4244177 intergenic not near genes chr2L_7_4240001 chr2L_4240001 RAL-109_125b 243 chr2L 4270722 4270806 chr2L 4270853 4270892 5 117 14.0 14.0 14.0 0.3 170 chr2L 4270722 intergenic not near genes chr2L 4270807 intergenic not near genes chr2L 4270892 intergenic not near genes chr2L_5_4270001 chr2L_4270001 RAL-109_125b 244 chr2L 4293882 4293922 chr2L 4294014 4294048 8 134 18.5 22.0 20.2 0.4 166 chr2L 4293882 intron tutl + chr2L 4293965 intron tutl + chr2L 4294048 intron tutl + chr2L_8_4290001 chr2L_4290001 RAL-109_125b 245 chr2L 4293931 4293950 chr2L 4294006 4294030 4 101 15.0 21.0 18.0 0.2 99 chr2L 4293931 intron tutl + chr2L 4293980 intron tutl + chr2L 4294030 intron tutl + chr2L_4_4290001 chr2L_4290001 RAL-109_125b 246 chr2L 4317880 4317897 chr2L 4318001 4318009 8 124 8.5 12.0 10.2 0.7 129 chr2L 4317880 intron tutl + chr2L 4317944 intron tutl + chr2L 4318009 intron tutl + chr2L_8_4315001 chr2L_4315001 RAL-109_125b 247 chr2L 4325586 4325615 chr2L 4325825 4325854 5 239 4.5 4.5 4.5 0.9 268 chr2L 4325586 intron CG16857 + chr2L 4325720 intron CG16857 + chr2L 4325854 intron CG16857 + chr2L_5_4325001 chr2L_4325001 RAL-109_125b 248 chr2L 4345444 4345515 chr2L 4345572 4345643 14 128 17.5 20.0 18.8 0.7 199 chr2L 4345444 3` UTR Atet + chr2L 4345544 3` UTR Atet + chr2L 4345643 3` UTR Atet + chr2L_14_4345001 chr2L_4345001 RAL-109_125b 249 chr2L 4351432 4351499 chr2L 4351558 4351625 15 126 29.5 28.0 28.8 0.5 193 chr2L 4351432 5` UTR CR44700 + chr2L 4351528 intergenic CR44700 + chr2L 4351625 intergenic CR44700 + chr2L_15_4350001 chr2L_4350001 RAL-109_125b 250 chr2L 4371114 4371171 chr2L 4371252 4371309 4 138 30.0 23.0 26.5 0.1 195 chr2L 4371114 intron Traf4 + chr2L 4371212 intron Traf4 + chr2L 4371309 intron Traf4 + chr2L_4_4370001 chr2L_4370001 RAL-109_125b 251 chr2L 4450530 4450551 chr2L 4450658 4450667 5 122 22.0 14.0 18.0 0.3 137 chr2L 4450530 intron CG15439 - chr2L 4450598 intron CG15439 - chr2L 4450667 intron CG15439 - chr2L_5_4450001 chr2L_4450001 RAL-109_125b 252 chr2L 4487201 4487270 chr2L 4487351 4487420 8 148 27.0 28.0 27.5 0.3 219 chr2L 4487201 intron dp - chr2L 4487310 intron dp - chr2L 4487420 intron dp - chr2L_8_4485001 chr2L_4485001 RAL-109_125b 253 chr2L 4601663 4601712 chr2L 4609154 4609197 mdg1 22 7490 7.0 5.5 6.2 3.1 7534 chr2L 4601663 intron dp - chr2L 4605430 intron dp - chr2L 4609197 intron dp - chr2L_22_4605001 chr2L_4605001 RAL-109_125b 254 chr2L 4601713 4601721 chr2L 4609153 4609212 mdg1 4 7478 6.0 5.0 5.5 0.6 7499 chr2L 4601713 intron dp - chr2L 4605462 intron dp - chr2L 4609212 intron dp - chr2L_4_4605001 chr2L_4605001 RAL-109_125b 255 chr2L 4658455 4658501 chr2L 4658576 4658610 9 124 15.0 16.0 15.5 0.5 155 chr2L 4658455 intergenic not near genes chr2L 4658532 intergenic not near genes chr2L 4658610 intergenic not near genes chr2L_9_4655001 chr2L_4655001 RAL-109_125b 256 chr2L 4661794 4661844 chr2L 4669424 4669474 opus 13 7630 10.5 7.5 9.0 1.3 7680 chr2L 4661794 intergenic not near genes chr2L 4665634 intergenic not near genes chr2L 4669474 intergenic not near genes chr2L_13_4665001 chr2L_4665001 RAL-109_125b 257 chr2L 4693356 4693414 chr2L 4693573 4693631 15 216 8.0 17.0 12.5 1.1 275 chr2L 4693356 intergenic not near genes chr2L 4693494 intergenic not near genes chr2L 4693631 intergenic not near genes chr2L_15_4690001 chr2L_4690001 RAL-109_125b 258 chr2L 4737893 4737930 chr2L 4738018 4738070 10 131 16.5 21.5 19.0 0.5 177 chr2L 4737893 intron CG15630 - chr2L 4737982 intron CG15630 - chr2L 4738070 intron CG15630 - chr2L_10_4735001 chr2L_4735001 RAL-109_125b 259 chr2L 4740387 4740455 chr2L 4740748 4740796 12 352 16.0 11.5 13.8 0.8 409 chr2L 4740387 intron CG15630 - chr2L 4740592 intron CG15630 - chr2L 4740796 intron CG15630 - chr2L_12_4740001 chr2L_4740001 RAL-109_125b 260 chr2L 4767329 4767408 chr2L 4767494 4767541 4 156 24.5 19.0 21.8 0.2 212 chr2L 4767329 intron CG15630 - chr2L 4767435 intron CG15630 - chr2L 4767541 intron CG15630 - chr2L_4_4765001 chr2L_4765001 RAL-109_125b 261 chr2L 4781080 4781139 chr2L 4781240 4781284 6 150 23.0 23.0 23.0 0.2 204 chr2L 4781080 intron CG15630 - chr2L 4781182 intron CG15630 - chr2L 4781284 intron CG15630 - chr2L_6_4780001 chr2L_4780001 RAL-109_125b 262 chr2L 4793277 4793319 chr2L 4793610 4793664 13 343 12.5 7.5 10.0 1.2 387 chr2L 4793277 intron CG15630 - chr2L 4793470 intron CG15630 - chr2L 4793664 exon CG15630 - chr2L_13_4790001 chr2L_4790001 RAL-109_125b 263 chr2L 4819449 4819516 chr2L 4819622 4819689 25 172 3.0 6.0 4.5 4.5 240 chr2L 4819449 intergenic not near genes chr2L 4819569 intergenic not near genes chr2L 4819689 intergenic not near genes chr2L_25_4815001 chr2L_4815001 RAL-109_125b 264 chr2L 4841059 4841101 chr2L 4841150 4841196 14 118 29.0 27.0 28.0 0.5 137 chr2L 4841059 intron CG12194 + chr2L 4841128 intron CG12194 + chr2L 4841196 3` UTR CG12194 + chr2L_14_4840001 chr2L_4840001 RAL-109_125b 265 chr2L 4858408 4858478 chr2L 4858557 4858622 7 146 16.5 21.0 18.8 0.4 214 chr2L 4858408 intron pog + chr2L 4858515 intron pog + chr2L 4858622 intron pog + chr2L_7_4855001 chr2L_4855001 RAL-109_125b 266 chr2L 4861162 4861211 chr2L 4861304 4861353 8 142 23.5 13.5 18.5 0.4 191 chr2L 4861162 intron pog + chr2L 4861258 intron pog + chr2L 4861353 intron pog + chr2L_8_4860001 chr2L_4860001 RAL-109_125b 267 chr2L 4884990 4885058 chr2L 4885132 4885197 8 131 12.5 16.0 14.2 0.5 207 chr2L 4884990 exon CG3008 + chr2L 4885094 exon CG3008 + chr2L 4885197 exon CG3008 + chr2L_8_4885001 chr2L_4885001 RAL-109_125b 268 chr2L 4903832 4903868 chr2L 4903989 4904025 7 157 13.0 14.0 13.5 0.5 193 chr2L 4903832 3` UTR CG3036 + chr2L 4903928 3` UTR CG2837 - chr2L 4904025 3` UTR CG2837 - chr2L_7_4900001 chr2L_4900001 RAL-109_125b 269 chr2L 4918118 4918189 chr2L 4923241 4923350 jockey 11 5137 9.5 0.0 4.8 1.9 5232 chr2L 4918118 intron hoe1 - chr2L 4920734 intron hoe1 - chr2L 4923350 intron hoe1 - chr2L_11_4920001 chr2L_4920001 RAL-109_125b 270 chr2L 4923238 4923256 chr2L 4923377 4923396 6 140 0.0 11.5 5.8 0.9 158 chr2L 4923238 intron hoe1 - chr2L 4923317 intron hoe1 - chr2L 4923396 intron hoe1 - chr2L_6_4920001 chr2L_4920001 RAL-109_125b 271 chr2L 4925623 4925695 chr2L 4925752 4925824 8 128 10.5 9.0 9.8 0.7 201 chr2L 4925623 intron hoe1 - chr2L 4925724 intron hoe1 - chr2L 4925824 intron hoe1 - chr2L_8_4925001 chr2L_4925001 RAL-109_125b 272 chr2L 4953482 4953486 chr2L 4953773 4953777 pogo 4 291 19.0 0.0 9.5 0.4 295 chr2L 4953482 intergenic Jon25Bii - chr2L 4953630 intergenic Jon25Bii - chr2L 4953777 intergenic not near genes chr2L_4_4950001 chr2L_4950001 RAL-109_125b 273 chr2L 4996045 4996054 chr2L 4996172 4996181 9 127 24.0 14.0 19.0 0.5 136 chr2L 4996045 intron Rtnl1 - chr2L 4996113 intron Rtnl1 - chr2L 4996181 intron Rtnl1 - chr2L_9_4995001 chr2L_4995001 RAL-109_125b 274 chr2L 4996060 4996108 chr2L 4996168 4996235 17 126 13.0 12.5 12.8 1.2 175 chr2L 4996060 intron Rtnl1 - chr2L 4996148 intron Rtnl1 - chr2L 4996235 intron Rtnl1 - chr2L_17_4995001 chr2L_4995001 RAL-109_125b 275 chr2L 5081291 5081363 chr2L 5085867 5085938 8 4577 45.0 27.0 36.0 0.2 4647 chr2L 5081291 intron pgant5 - chr2L 5083614 intron pgant5 - chr2L 5085938 intron pgant5 - chr2L_8_5080001 chr2L_5080001 RAL-109_125b 276 chr2L 5090537 5090608 chr2L 5090919 5090990 13 379 13.5 9.0 11.2 1.1 453 chr2L 5090537 intron pgant5 - chr2L 5090764 intron pgant5 - chr2L 5090990 intron pgant5 - chr2L_13_5090001 chr2L_5090001 RAL-109_125b 277 chr2L 5117251 5117286 chr2L 5117383 5117416 9 129 30.5 23.0 26.8 0.3 165 chr2L 5117251 intron Msp300 + chr2L 5117334 intron Msp300 + chr2L 5117416 intron Msp300 + chr2L_9_5115001 chr2L_5115001 RAL-109_125b 278 chr2L 5120931 5120993 chr2L 5121075 5121137 9 140 21.0 14.5 17.8 0.5 206 chr2L 5120931 intron Msp300 + chr2L 5121034 intron Msp300 + chr2L 5121137 intron Msp300 + chr2L_9_5120001 chr2L_5120001 RAL-109_125b 279 chr2L 5150925 5150933 chr2L 5151113 5151116 4 187 23.5 23.5 23.5 0.2 191 chr2L 5150925 intron Msp300 + chr2L 5151020 intron Msp300 + chr2L 5151116 intron Msp300 + chr2L_4_5150001 chr2L_5150001 RAL-109_125b 280 chr2L 5230871 5230939 chr2L 5230998 5231035 5 120 21.0 22.0 21.5 0.2 164 chr2L 5230871 intron tkv - chr2L 5230953 intron tkv - chr2L 5231035 intron tkv - chr2L_5_5230001 chr2L_5230001 RAL-109_125b 281 chr2L 5257714 5257787 chr2L 5257848 5257921 10 133 18.0 19.0 18.5 0.5 207 chr2L 5257714 intron tkv - chr2L 5257818 intron tkv - chr2L 5257921 intron tkv - chr2L_10_5255001 chr2L_5255001 RAL-109_125b 282 chr2L 5262500 5262545 chr2L 5262608 5262651 8 108 24.0 25.0 24.5 0.3 151 chr2L 5262500 intron tkv - chr2L 5262576 intron tkv - chr2L 5262651 intron tkv - chr2L_8_5260001 chr2L_5260001 RAL-109_125b 283 chr2L 5270745 5270814 chr2L 5270877 5270887 22 125 19.5 26.0 22.8 0.9 142 chr2L 5270745 intron tkv - chr2L 5270816 intron tkv - chr2L 5270887 intron tkv - chr2L_22_5270001 chr2L_5270001 RAL-109_125b 284 chr2L 5276692 5276721 chr2L 5276805 5276855 8 129 7.0 7.0 7.0 1.0 163 chr2L 5276692 exon Bsg25D - chr2L 5276774 intron Bsg25D - chr2L 5276855 intron Bsg25D - chr2L_8_5275001 chr2L_5275001 RAL-109_125b 285 chr2L 5334738 5334796 chr2L 5334891 5334949 9 152 17.0 14.0 15.5 0.5 211 chr2L 5334738 intron fusl - chr2L 5334844 intron fusl - chr2L 5334949 intron fusl - chr2L_9_5330001 chr2L_5330001 RAL-109_125b 286 chr2L 5342735 5342798 chr2L 5345155 5345190 Doc 18 2415 2.5 5.0 3.8 3.8 2455 chr2L 5342735 intergenic not near genes chr2L 5343962 intergenic not near genes chr2L 5345190 intergenic not near genes chr2L_18_5340001 chr2L_5340001 RAL-109_125b 287 chr2L 5396362 5396372 chr2L 5396488 5396498 8 125 29.5 19.5 24.5 0.3 136 chr2L 5396362 intergenic not near genes chr2L 5396430 intergenic not near genes chr2L 5396498 intergenic not near genes chr2L_8_5395001 chr2L_5395001 RAL-109_125b 288 chr2L 5403092 5403150 chr2L 5403234 5403293 6 143 10.0 9.5 9.8 0.6 201 chr2L 5403092 intergenic not near genes chr2L 5403192 intergenic not near genes chr2L 5403293 intergenic not near genes chr2L_6_5400001 chr2L_5400001 RAL-109_125b 289 chr2L 5410006 5410039 chr2L 5410152 5410185 6 146 15.0 12.5 13.8 0.4 179 chr2L 5410006 intron H15 + chr2L 5410096 intron H15 + chr2L 5410185 intron H15 + chr2L_6_5410001 chr2L_5410001 RAL-109_125b 290 chr2L 5433801 5433879 chr2L 5433931 5434009 12 128 3.5 5.5 4.5 2.2 208 chr2L 5433801 3` UTR CR43715 - chr2L 5433905 3` UTR CR43715 - chr2L 5434009 3` UTR CR43715 - chr2L_12_5430001 chr2L_5430001 RAL-109_125b 291 chr2L 5436491 5436529 chr2L 5436617 5436628 9 121 21.0 29.0 25.0 0.3 137 chr2L 5436491 3` UTR CR31647 - chr2L 5436560 3` UTR CR31647 - chr2L 5436628 3` UTR CR31647 - chr2L_9_5435001 chr2L_5435001 RAL-109_125b 292 chr2L 5475100 5475162 chr2L 5475255 5475317 18 153 8.0 5.5 6.8 2.3 217 chr2L 5475100 intergenic not near genes chr2L 5475208 intergenic not near genes chr2L 5475317 intergenic not near genes chr2L_18_5475001 chr2L_5475001 RAL-109_125b 293 chr2L 5476175 5476227 chr2L 5476296 5476353 4 120 9.5 12.0 10.8 0.3 178 chr2L 5476175 intergenic not near genes chr2L 5476264 intergenic not near genes chr2L 5476353 intergenic not near genes chr2L_4_5475001 chr2L_5475001 RAL-109_125b 294 chr2L 5487968 5488032 chr2L 5488098 5488162 14 130 9.0 0.0 4.5 2.5 194 chr2L 5487968 intergenic not near genes chr2L 5488065 intergenic not near genes chr2L 5488162 intergenic not near genes chr2L_14_5485001 chr2L_5485001 RAL-109_125b 295 chr2L 5500016 5500068 chr2L 5500146 5500204 21 135 1.0 7.0 4.0 4.2 188 chr2L 5500016 intergenic not near genes chr2L 5500110 intergenic not near genes chr2L 5500204 intergenic not near genes chr2L_21_5500001 chr2L_5500001 RAL-109_125b 296 chr2L 5508482 5508552 chr2L 5508609 5508678 10 125 20.5 16.5 18.5 0.5 196 chr2L 5508482 intergenic not near genes chr2L 5508580 intergenic not near genes chr2L 5508678 intergenic not near genes chr2L_10_5505001 chr2L_5505001 RAL-109_125b 297 chr2L 5516618 5516676 chr2L 5516747 5516805 16 129 20.0 11.5 15.8 1.0 187 chr2L 5516618 intergenic not near genes chr2L 5516712 intergenic not near genes chr2L 5516805 intergenic not near genes chr2L_16_5515001 chr2L_5515001 RAL-109_125b 298 chr2L 5587582 5587601 chr2L 5587672 5587698 4 101 19.0 18.0 18.5 0.2 116 chr2L 5587582 exon CG7251 - chr2L 5587640 exon CG7251 - chr2L 5587698 exon CG7251 - chr2L_4_5585001 chr2L_5585001 RAL-109_125b 299 chr2L 5594311 5594353 chr2L 5594448 5594464 10 134 19.5 23.0 21.2 0.5 153 chr2L 5594311 intergenic not near genes chr2L 5594388 intergenic not near genes chr2L 5594464 intergenic not near genes chr2L_10_5590001 chr2L_5590001 RAL-109_125b 300 chr2L 5628151 5628221 chr2L 5628286 5628355 5 134 9.0 16.5 12.8 0.4 204 chr2L 5628151 intron CG31646 - chr2L 5628253 intron CG31646 - chr2L 5628355 intron CG31646 - chr2L_5_5625001 chr2L_5625001 RAL-109_125b 301 chr2L 5646636 5646676 chr2L 5646773 5646804 10 134 13.5 13.0 13.2 0.7 168 chr2L 5646636 intron CG31646 - chr2L 5646720 intron CG31646 - chr2L 5646804 intron CG31646 - chr2L_10_5645001 chr2L_5645001 RAL-109_125b 302 chr2L 5666245 5666324 chr2L 5666383 5666464 18 138 5.0 7.0 6.0 2.6 219 chr2L 5666245 intron Hsp60C + chr2L 5666354 intron Hsp60C + chr2L 5666464 intron Hsp60C + chr2L_18_5665001 chr2L_5665001 RAL-109_125b 303 chr2L 5676881 5676920 chr2L 5677027 5677066 6 144 17.0 21.5 19.2 0.3 185 chr2L 5676881 intergenic not near genes chr2L 5676974 intergenic not near genes chr2L 5677066 intergenic not near genes chr2L_6_5675001 chr2L_5675001 RAL-109_125b 304 chr2L 5695811 5695887 chr2L 5695953 5696029 15 141 16.0 17.0 16.5 0.9 218 chr2L 5695811 intergenic not near genes chr2L 5695920 intergenic not near genes chr2L 5696029 intergenic not near genes chr2L_15_5695001 chr2L_5695001 RAL-109_125b 305 chr2L 5714202 5714269 chr2L 5714363 5714423 7 159 25.0 21.5 23.2 0.3 221 chr2L 5714202 intergenic not near genes chr2L 5714312 intergenic not near genes chr2L 5714423 intergenic not near genes chr2L_7_5710001 chr2L_5710001 RAL-109_125b 306 chr2L 5764875 5764929 chr2L 5765034 5765087 5 159 0.5 10.0 5.2 0.8 212 chr2L 5764875 intron obst-E - chr2L 5764981 intron obst-E - chr2L 5765087 intron obst-E - chr2L_5_5760001 chr2L_5760001 RAL-109_125b 307 chr2L 5784926 5784976 chr2L 5785059 5785099 9 132 24.0 27.5 25.8 0.3 173 chr2L 5784926 intron CG9171 - chr2L 5785012 intron CG9171 - chr2L 5785099 intron CG9171 - chr2L_9_5785001 chr2L_5785001 RAL-109_125b 308 chr2L 5789805 5789822 chr2L 5789939 5789951 4 131 23.0 24.5 23.8 0.2 146 chr2L 5789805 intron CG9171 - chr2L 5789878 intron CG9171 - chr2L 5789951 intron CG9171 - chr2L_4_5785001 chr2L_5785001 RAL-109_125b 309 chr2L 5805185 5805229 chr2L 5805306 5805381 14 149 9.5 15.5 12.5 1.0 196 chr2L 5805185 intergenic CG11034 + chr2L 5805283 intergenic CG11034 + chr2L 5805381 intergenic CG11034 + chr2L_14_5805001 chr2L_5805001 RAL-109_125b 310 chr2L 5806200 5806235 chr2L 5806353 5806387 8 152 25.0 21.5 23.2 0.3 187 chr2L 5806200 intron CG11034 + chr2L 5806294 intron CG11034 + chr2L 5806387 intron CG11034 + chr2L_8_5805001 chr2L_5805001 RAL-109_125b 311 chr2L 5812892 5812955 chr2L 5813040 5813065 18 143 24.0 17.5 20.8 0.8 173 chr2L 5812892 intergenic not near genes chr2L 5812978 intergenic not near genes chr2L 5813065 intergenic not near genes chr2L_18_5810001 chr2L_5810001 RAL-109_125b 312 chr2L 5819634 5819702 chr2L 5819768 5819789 10 127 19.5 18.0 18.8 0.5 155 chr2L 5819634 intergenic not near genes chr2L 5819712 intergenic not near genes chr2L 5819789 intergenic not near genes chr2L_10_5815001 chr2L_5815001 RAL-109_125b 313 chr2L 5827675 5827679 chr2L 5836733 5836737 roo 4 9058 17.0 13.5 15.2 0.2 9062 chr2L 5827675 intron TrissinR + chr2L 5832206 intron TrissinR + chr2L 5836737 intron TrissinR + chr2L_4_5830001 chr2L_5830001 RAL-109_125b 314 chr2L 5827681 5827728 chr2L 5836727 5836786 roo 22 9056 10.0 12.0 11.0 1.8 9105 chr2L 5827681 intron TrissinR + chr2L 5832234 intron TrissinR + chr2L 5836786 intron TrissinR + chr2L_22_5830001 chr2L_5830001 RAL-109_125b 315 chr2L 5842281 5842288 chr2L 5842414 5842421 4 133 16.0 0.0 8.0 0.4 140 chr2L 5842281 intron TrissinR + chr2L 5842351 intron TrissinR + chr2L 5842421 intron TrissinR + chr2L_4_5840001 chr2L_5840001 RAL-109_125b 316 chr2L 5843794 5843867 chr2L 5843932 5844005 15 135 17.5 20.0 18.8 0.8 211 chr2L 5843794 intron TrissinR + chr2L 5843900 intron TrissinR + chr2L 5844005 intron TrissinR + chr2L_15_5840001 chr2L_5840001 RAL-109_125b 317 chr2L 5853675 5853736 chr2L 5853809 5853849 10 124 11.5 14.5 13.0 0.7 174 chr2L 5853675 intron TrissinR + chr2L 5853762 intron TrissinR + chr2L 5853849 intron TrissinR + chr2L_10_5850001 chr2L_5850001 RAL-109_125b 318 chr2L 5897551 5897563 chr2L 5897684 5897696 4 132 18.5 6.5 12.5 0.3 145 chr2L 5897551 intergenic not near genes chr2L 5897624 intergenic not near genes chr2L 5897696 intergenic not near genes chr2L_4_5895001 chr2L_5895001 RAL-109_125b 319 chr2L 5897569 5897618 chr2L 5897687 5897744 23 134 8.0 8.0 8.0 2.6 175 chr2L 5897569 intergenic not near genes chr2L 5897656 intergenic not near genes chr2L 5897744 intergenic not near genes chr2L_23_5895001 chr2L_5895001 RAL-109_125b 320 chr2L 5926456 5926516 chr2L 5926843 5926903 13 386 10.5 11.5 11.0 1.1 447 chr2L 5926456 intron dsf + chr2L 5926680 intron dsf + chr2L 5926903 intron dsf + chr2L_13_5925001 chr2L_5925001 RAL-109_125b 321 chr2L 5935991 5936016 chr2L 5936129 5936153 6 137 10.0 14.5 12.2 0.5 162 chr2L 5935991 intron dsf + chr2L 5936072 intron dsf + chr2L 5936153 exon dsf + chr2L_6_5935001 chr2L_5935001 RAL-109_125b 322 chr2L 5940986 5940998 chr2L 5941146 5941158 5 160 6.5 23.0 14.8 0.3 172 chr2L 5940986 intergenic not near genes chr2L 5941072 intergenic not near genes chr2L 5941158 intergenic not near genes chr2L_5_5940001 chr2L_5940001 RAL-109_125b 323 chr2L 5941984 5942044 chr2L 5942126 5942186 9 135 20.5 22.5 21.5 0.4 202 chr2L 5941984 intergenic CR45289 + chr2L 5942085 5` UTR CR45289 + chr2L 5942186 5` UTR CR45289 + chr2L_9_5940001 chr2L_5940001 RAL-109_125b 324 chr2L 5943601 5943676 chr2L 5943734 5943812 12 133 23.0 21.0 22.0 0.5 211 chr2L 5943601 intergenic Gpdh +,Sfp26Ad - chr2L 5943706 5` UTR Gpdh + chr2L 5943812 5` UTR Gpdh + chr2L_12_5940001 chr2L_5940001 RAL-109_125b 325 chr2L 5975575 5975614 chr2L 5975688 5975733 8 132 10.0 12.5 11.2 0.7 158 chr2L 5975575 intron chic - chr2L 5975654 intron chic - chr2L 5975733 intron chic - chr2L_8_5975001 chr2L_5975001 RAL-109_125b 326 chr2L 5982099 5982154 chr2L 5982228 5982283 6 120 21.0 26.0 23.5 0.2 184 chr2L 5982099 intron eIF-4a + chr2L 5982191 intron eIF-4a + chr2L 5982283 intron eIF-4a + chr2L_6_5980001 chr2L_5980001 RAL-109_125b 327 chr2L 5988999 5989037 chr2L 5989131 5989136 9 127 25.0 21.5 23.2 0.4 137 chr2L 5988999 intergenic ifc +,lid - chr2L 5989068 intergenic ifc +,lid - chr2L 5989136 intergenic lid -,ifc + chr2L_9_5985001 chr2L_5985001 RAL-109_125b 328 chr2L 5993289 5993350 chr2L 5993424 5993474 13 138 25.5 27.5 26.5 0.5 185 chr2L 5993289 exon lid - chr2L 5993382 intron lid - chr2L 5993474 exon lid - chr2L_13_5990001 chr2L_5990001 RAL-109_125b 329 chr2L 6018180 6018335 chr2L 6018309 6018508 22 154 21.0 20.5 20.8 1.0 328 chr2L 6018180 intron H2.0 - chr2L 6018344 intron H2.0 - chr2L 6018508 intron H2.0 - chr2L_22_6015001 chr2L_6015001 RAL-109_125b 330 chr2L 6025518 6025572 chr2L 6025655 6025709 13 136 19.0 20.5 19.8 0.6 191 chr2L 6025518 intergenic CG9109 - chr2L 6025614 intergenic CG9109 - chr2L 6025709 intergenic CG9109 - chr2L_13_6025001 chr2L_6025001 RAL-109_125b 331 chr2L 6026880 6026943 chr2L 6027008 6027077 14 133 14.5 10.5 12.5 1.0 197 chr2L 6026880 intron CG9109 - chr2L 6026978 intron CG9109 - chr2L 6027077 intron CG9109 - chr2L_14_6025001 chr2L_6025001 RAL-109_125b 332 chr2L 6053830 6053883 chr2L 6053955 6054009 13 123 23.5 23.5 23.5 0.5 179 chr2L 6053830 3` UTR CG9135 + chr2L 6053920 intergenic CG9135 +,CG13995 + chr2L 6054009 intergenic CG9135 +,CG13995 + chr2L_13_6050001 chr2L_6050001 RAL-109_125b 333 chr2L 6080622 6080665 chr2L 6080735 6080793 8 113 11.0 6.5 8.8 0.8 171 chr2L 6080622 intergenic CR44773 + chr2L 6080708 intergenic not near genes chr2L 6080793 intergenic not near genes chr2L_8_6080001 chr2L_6080001 RAL-109_125b 334 chr2L 6093664 6093708 chr2L 6093787 6093838 4 117 7.0 13.0 10.0 0.4 174 chr2L 6093664 exon,3` UTR Kr-h1 +,CG45075 + chr2L 6093751 intron,intron Kr-h1 +,CG45075 + chr2L 6093838 exon,3` UTR Kr-h1 +,CG45075 + chr2L_4_6090001 chr2L_6090001 RAL-109_125b 335 chr2L 6096554 6096588 chr2L 6096677 6096688 10 123 19.0 18.0 18.5 0.5 134 chr2L 6096554 intergenic Kr-h1 +,CG45075 +,CG9175 - chr2L 6096621 intergenic CG9175 -,Kr-h1 +,CG45075 + chr2L 6096688 intergenic CG9175 -,Kr-h1 +,CG45075 + chr2L_10_6095001 chr2L_6095001 RAL-109_125b 336 chr2L 6136523 6136576 chr2L 6136649 6136723 6 140 14.5 12.0 13.2 0.4 200 chr2L 6136523 intergenic not near genes chr2L 6136623 intergenic not near genes chr2L 6136723 intergenic not near genes chr2L_6_6135001 chr2L_6135001 RAL-109_125b 337 chr2L 6153663 6153710 chr2L 6153809 6153856 6 146 15.5 19.5 17.5 0.3 193 chr2L 6153663 3` UTR Muc26B + chr2L 6153760 intergenic Muc26B +,CG31639 - chr2L 6153856 3` UTR CG31639 - chr2L_6_6150001 chr2L_6150001 RAL-109_125b 338 chr2L 6227350 6227386 chr2L 6227481 6227517 8 131 7.5 14.0 10.8 0.7 167 chr2L 6227350 intergenic not near genes chr2L 6227434 intergenic not near genes chr2L 6227517 intergenic not near genes chr2L_8_6225001 chr2L_6225001 RAL-109_125b 339 chr2L 6242928 6242969 chr2L 6243076 6243117 10 147 9.5 11.0 10.2 0.9 189 chr2L 6242928 intergenic not near genes chr2L 6243022 intergenic not near genes chr2L 6243117 intergenic not near genes chr2L_10_6240001 chr2L_6240001 RAL-109_125b 340 chr2L 6268471 6268539 chr2L 6268607 6268675 9 136 24.5 23.5 24.0 0.4 204 chr2L 6268471 intron Ddr + chr2L 6268573 intron Ddr + chr2L 6268675 intron Ddr + chr2L_9_6265001 chr2L_6265001 RAL-109_125b 341 chr2L 6279600 6279635 chr2L 6279729 6279760 INE-1 5 128 28.0 13.0 20.5 0.2 160 chr2L 6279600 intron Ddr + chr2L 6279680 intron Ddr + chr2L 6279760 intron Ddr + chr2L_5_6275001 chr2L_6275001 RAL-109_125b 342 chr2L 6283892 6283975 chr2L 6284053 6284137 16 159 6.5 3.5 5.0 2.7 245 chr2L 6283892 intron Ddr + chr2L 6284014 intron Ddr + chr2L 6284137 intron Ddr + chr2L_16_6280001 chr2L_6280001 RAL-109_125b 343 chr2L 6286341 6286420 chr2L 6286486 6286564 14 141 19.0 17.5 18.2 0.7 223 chr2L 6286341 intron Ddr + chr2L 6286452 intron Ddr + chr2L 6286564 intron Ddr + chr2L_14_6285001 chr2L_6285001 RAL-109_125b 344 chr2L 6300529 6300538 chr2L 6300665 6300672 4 136 21.0 25.5 23.2 0.2 143 chr2L 6300529 intron Ddr + chr2L 6300600 intron Ddr + chr2L 6300672 intron Ddr + chr2L_4_6300001 chr2L_6300001 RAL-109_125b 345 chr2L 6300539 6300575 chr2L 6300644 6300711 5 123 22.0 24.5 23.2 0.2 172 chr2L 6300539 intron Ddr + chr2L 6300625 intron Ddr + chr2L 6300711 intron Ddr + chr2L_5_6300001 chr2L_6300001 RAL-109_125b 346 chr2L 6343666 6343706 chr2L 6343930 6343987 29 267 64.0 58.5 61.2 0.5 321 chr2L 6343666 intron Cpr + chr2L 6343826 intron Cpr + chr2L 6343987 intron Cpr + chr2L_29_6340001 chr2L_6340001 RAL-109_125b 347 chr2L 6349060 6349134 chr2L 6349208 6349276 11 142 30.5 28.5 29.5 0.4 216 chr2L 6349060 intergenic CG9498 - chr2L 6349168 intergenic CG9498 - chr2L 6349276 intergenic CG9498 - chr2L_11_6345001 chr2L_6345001 RAL-109_125b 348 chr2L 6363125 6363172 chr2L 6366076 6366139 Burdock 32 2967 11.5 5.5 8.5 3.4 3014 chr2L 6363125 intergenic not near genes chr2L 6364632 intergenic not near genes chr2L 6366139 intergenic not near genes chr2L_32_6360001 chr2L_6360001 RAL-109_125b 349 chr2L 6370205 6370277 chr2L 6370326 6370412 13 129 18.0 17.0 17.5 0.7 207 chr2L 6370205 intergenic CG9505 + chr2L 6370308 intergenic CG9505 + chr2L 6370412 intergenic CG9505 + chr2L_13_6370001 chr2L_6370001 RAL-109_125b 350 chr2L 6373017 6373077 chr2L 6373152 6373186 10 126 22.0 25.0 23.5 0.4 169 chr2L 6373017 intron slam + chr2L 6373102 intron slam + chr2L 6373186 intron slam + chr2L_10_6370001 chr2L_6370001 RAL-109_125b 351 chr2L 6397360 6397381 chr2L 6397504 6397505 4 139 24.5 22.5 23.5 0.2 145 chr2L 6397360 intron CG42368 - chr2L 6397432 intron CG42368 - chr2L 6397505 intron CG42368 - chr2L_4_6395001 chr2L_6395001 RAL-109_125b 352 chr2L 6397383 6397422 chr2L 6397502 6397566 7 136 17.5 22.5 20.0 0.3 183 chr2L 6397383 intron CG42368 - chr2L 6397474 intron CG42368 - chr2L 6397566 intron CG42368 - chr2L_7_6395001 chr2L_6395001 RAL-109_125b 353 chr2L 6414945 6415013 chr2L 6415086 6415153 9 141 19.5 24.5 22.0 0.4 208 chr2L 6414945 3` UTR CG13982 + chr2L 6415049 3` UTR CG13982 + chr2L 6415153 3` UTR CG13982 + chr2L_9_6415001 chr2L_6415001 RAL-109_125b 354 chr2L 6426812 6426877 chr2L 6445122 6445172 roo 28 18307 8.0 6.5 7.2 3.4 18360 chr2L 6426812 3` UTR CG9527 - chr2L 6435992 intron CG9527 - chr2L 6445172 exon CG9527 - chr2L_28_6435001 chr2L_6435001 RAL-109_125b 355 chr2L 6465771 6465840 chr2L 6466015 6466077 8 242 19.5 26.5 23.0 0.3 306 chr2L 6465771 intergenic CG16947 -,CG9531 - chr2L 6465924 intergenic CG16947 -,CG9531 - chr2L 6466077 intergenic CG9531 -,CG16947 - chr2L_8_6465001 chr2L_6465001 RAL-109_125b 356 chr2L 6481503 6481565 chr2L 6481639 6481680 12 127 21.5 25.5 23.5 0.5 177 chr2L 6481503 intron DLP + chr2L 6481592 intron DLP + chr2L 6481680 intron DLP + chr2L_12_6480001 chr2L_6480001 RAL-109_125b 357 chr2L 6492834 6492899 chr2L 6492968 6493033 20 131 31.5 32.0 31.8 0.6 199 chr2L 6492834 exon CG31638 + chr2L 6492934 intron CG31638 + chr2L 6493033 intron,3` UTR CG31638 +,CG9547 - chr2L_20_6490001 chr2L_6490001 RAL-109_125b 358 chr2L 6504921 6504994 chr2L 6505060 6505133 12 139 22.5 15.5 19.0 0.6 212 chr2L 6504921 intron CG31637 + chr2L 6505027 intron CG31637 + chr2L 6505133 intron CG31637 + chr2L_12_6505001 chr2L_6505001 RAL-109_125b 359 chr2L 6526943 6527024 chr2L 6527072 6527153 9 125 20.5 16.0 18.2 0.5 210 chr2L 6526943 3` UTR CG31637 + chr2L 6527048 intergenic CG31637 +,eya - chr2L 6527153 intergenic CG31637 +,eya - chr2L_9_6525001 chr2L_6525001 RAL-109_125b 360 chr2L 6537056 6537161 chr2L 6537162 6537289 18 132 5.0 10.0 7.5 2.1 233 chr2L 6537056 intron eya - chr2L 6537172 intron eya - chr2L 6537289 intron eya - chr2L_18_6535001 chr2L_6535001 RAL-109_125b 361 chr2L 6544333 6544373 chr2L 6544466 6544507 5 133 7.5 10.0 8.8 0.5 174 chr2L 6544333 intron eya - chr2L 6544420 intron eya - chr2L 6544507 intron eya - chr2L_5_6540001 chr2L_6540001 RAL-109_125b 362 chr2L 6564806 6564846 chr2L 6564949 6564988 6 138 21.0 15.0 18.0 0.3 182 chr2L 6564806 3` UTR CG13766 - chr2L 6564897 3` UTR CG13766 - chr2L 6564988 3` UTR CG13766 - chr2L_6_6560001 chr2L_6560001 RAL-109_125b 363 chr2L 6568156 6568211 chr2L 6568342 6568397 5 186 17.5 20.5 19.0 0.2 241 chr2L 6568156 intergenic CG11319 - chr2L 6568276 intergenic CG11319 - chr2L 6568397 intergenic CG11319 - chr2L_5_6565001 chr2L_6565001 RAL-109_125b 364 chr2L 6590078 6590120 chr2L 6590175 6590248 15 120 11.0 1.5 6.2 2.1 170 chr2L 6590078 intron CG11319 - chr2L 6590163 intron CG11319 - chr2L 6590248 intron CG11319 - chr2L_15_6590001 chr2L_6590001 RAL-109_125b 365 chr2L 6597233 6597278 chr2L 6597397 6597443 6 164 19.5 20.5 20.0 0.3 210 chr2L 6597233 intron CG11319 - chr2L 6597338 intron CG11319 - chr2L 6597443 intron CG11319 - chr2L_6_6595001 chr2L_6595001 RAL-109_125b 366 chr2L 6626844 6626912 chr2L 6626979 6627007 9 127 22.5 24.0 23.2 0.4 163 chr2L 6626844 intron Oatp26F - chr2L 6626926 intron Oatp26F - chr2L 6627007 intron Oatp26F - chr2L_9_6625001 chr2L_6625001 RAL-109_125b 367 chr2L 6655475 6655545 chr2L 6655887 6655909 18 402 45.5 39.0 42.2 0.4 434 chr2L 6655475 exon CG31633 - chr2L 6655692 exon CG31633 - chr2L 6655909 exon CG31633 - chr2L_18_6655001 chr2L_6655001 RAL-109_125b 368 chr2L 6653889 6653931 chr2L 6657619 6657637 5 3710 34.5 40.5 37.5 0.1 3748 chr2L 6653889 exon Tango1 + chr2L 6655763 exon CG31633 - chr2L 6657637 exon CG31636 - chr2L_5_6655001 chr2L_6655001 RAL-109_125b 369 chr2L 6740689 6740749 chr2L 6740826 6740886 5 137 13.5 16.0 14.8 0.3 197 chr2L 6740689 intergenic not near genes chr2L 6740788 intergenic not near genes chr2L 6740886 intergenic not near genes chr2L_5_6740001 chr2L_6740001 RAL-109_125b 370 chr2L 6746053 6746118 chr2L 6746178 6746244 7 121 17.5 21.0 19.2 0.3 191 chr2L 6746053 intron CG11221 + chr2L 6746148 intron CG11221 + chr2L 6746244 intron CG11221 + chr2L_7_6745001 chr2L_6745001 RAL-109_125b 371 chr2L 6798084 6798122 chr2L 6798208 6798257 11 133 30.0 25.5 27.8 0.4 173 chr2L 6798084 intron nrv2 - chr2L 6798170 intron nrv2 - chr2L 6798257 5` UTR nrv2 - chr2L_11_6795001 chr2L_6795001 RAL-109_125b 372 chr2L 6818082 6818109 chr2L 6818221 6818248 6 136 6.0 6.0 6.0 0.9 166 chr2L 6818082 intergenic not near genes chr2L 6818165 intergenic not near genes chr2L 6818248 intergenic not near genes chr2L_6_6815001 chr2L_6815001 RAL-109_125b 373 chr2L 6836458 6836469 chr2L 6836590 6836601 5 132 20.5 6.0 13.2 0.4 143 chr2L 6836458 intron sens-2 + chr2L 6836530 intron sens-2 + chr2L 6836601 intron sens-2 + chr2L_5_6835001 chr2L_6835001 RAL-109_125b 374 chr2L 6836473 6836529 chr2L 6836585 6836661 23 131 8.0 6.0 7.0 2.9 188 chr2L 6836473 intron sens-2 + chr2L 6836567 intron sens-2 + chr2L 6836661 intron sens-2 + chr2L_23_6835001 chr2L_6835001 RAL-109_125b 375 chr2L 6844326 6844336 chr2L 6844462 6844472 4 136 13.5 10.5 12.0 0.3 146 chr2L 6844326 intergenic not near genes chr2L 6844399 intergenic not near genes chr2L 6844472 intergenic not near genes chr2L_4_6840001 chr2L_6840001 RAL-109_125b 376 chr2L 6850344 6850409 chr2L 6850477 6850542 10 133 5.5 7.5 6.5 1.3 198 chr2L 6850344 intergenic not near genes chr2L 6850443 intergenic not near genes chr2L 6850542 intergenic not near genes chr2L_10_6850001 chr2L_6850001 RAL-109_125b 377 chr2L 6867755 6867771 chr2L 6867893 6867910 4 138 25.5 24.5 25.0 0.2 155 chr2L 6867755 intron Nha1 - chr2L 6867832 intron Nha1 - chr2L 6867910 intron Nha1 - chr2L_4_6865001 chr2L_6865001 RAL-109_125b 378 chr2L 6876755 6876804 chr2L 6882965 6882988 diver 18 6221 9.5 5.0 7.2 2.2 6233 chr2L 6876755 intron Nlg2 + chr2L 6879872 intron Nlg2 + chr2L 6882988 intron Nlg2 + chr2L_18_6875001 chr2L_6875001 RAL-109_125b 379 chr2L 6883710 6883756 chr2L 6883846 6883892 7 135 11.5 18.5 15.0 0.4 182 chr2L 6883710 intron Nlg2 + chr2L 6883801 intron Nlg2 + chr2L 6883892 intron Nlg2 + chr2L_7_6880001 chr2L_6880001 RAL-109_125b 380 chr2L 6887449 6887525 chr2L 6887649 6887724 11 200 6.5 1.0 3.8 2.3 275 chr2L 6887449 intron Nlg2 + chr2L 6887586 intron Nlg2 + chr2L 6887724 intron Nlg2 + chr2L_11_6885001 chr2L_6885001 RAL-109_125b 381 chr2L 6902526 6902594 chr2L 6902654 6902704 16 127 24.0 22.5 23.2 0.7 178 chr2L 6902526 exon Nlg2 + chr2L 6902615 intron Nlg2 + chr2L 6902704 intron Nlg2 + chr2L_16_6900001 chr2L_6900001 RAL-109_125b 382 chr2L 6968443 6968502 chr2L 6968655 6968714 12 210 24.5 25.5 25.0 0.5 271 chr2L 6968443 intergenic snRNP-U1-70K - chr2L 6968578 intergenic snRNP-U1-70K - chr2L 6968714 3` UTR snRNP-U1-70K - chr2L_12_6965001 chr2L_6965001 RAL-109_125b 383 chr2L 6972217 6972274 chr2L 6972690 6972732 9 467 0.0 5.5 2.8 2.4 515 chr2L 6972217 intergenic snRNP-U1-70K - chr2L 6972474 intergenic uif - chr2L 6972732 intergenic uif - chr2L_9_6970001 chr2L_6970001 RAL-109_125b 384 chr2L 6991370 6991434 chr2L 6998552 6998605 HMS-Beagle 20 7175 6.0 6.0 6.0 2.9 7235 chr2L 6991370 intron uif - chr2L 6994988 intron uif - chr2L 6998605 intron uif - chr2L_20_6990001 chr2L_6990001 RAL-109_125b 385 chr2L 7005224 7005248 chr2L 7005370 7005394 5 146 14.0 15.5 14.8 0.3 170 chr2L 7005224 intron uif - chr2L 7005309 intron uif - chr2L 7005394 intron uif - chr2L_5_7005001 chr2L_7005001 RAL-109_125b 386 chr2L 7022454 7022464 chr2L 7022613 7022636 5 169 20.0 20.5 20.2 0.2 182 chr2L 7022454 intron,3` UTR ade3 -,Pcp + chr2L 7022545 intron ade3 - chr2L 7022636 intron ade3 - chr2L_5_7020001 chr2L_7020001 RAL-109_125b 387 chr2L 7022466 7022511 chr2L 7022609 7022683 8 168 18.5 20.0 19.2 0.4 217 chr2L 7022466 intron,3` UTR ade3 -,Pcp + chr2L 7022574 intron ade3 - chr2L 7022683 intron ade3 - chr2L_8_7020001 chr2L_7020001 RAL-109_125b 388 chr2L 7030045 7030100 chr2L 7030175 7030231 17 131 24.0 23.0 23.5 0.7 186 chr2L 7030045 intergenic Rab30 - chr2L 7030138 intergenic Rab30 - chr2L 7030231 intergenic Rab30 - chr2L_17_7030001 chr2L_7030001 RAL-109_125b 389 chr2L 7030960 7031027 chr2L 7031100 7031167 17 139 25.0 26.5 25.8 0.6 207 chr2L 7030960 3` UTR Rab30 - chr2L 7031064 3` UTR Rab30 - chr2L 7031167 3` UTR Rab30 - chr2L_17_7030001 chr2L_7030001 RAL-109_125b 390 chr2L 7042031 7042085 chr2L 7042170 7042224 5 139 1.0 11.0 6.0 0.7 193 chr2L 7042031 intron milt + chr2L 7042128 intron milt + chr2L 7042224 intron milt + chr2L_5_7040001 chr2L_7040001 RAL-109_125b 391 chr2L 7051094 7051109 chr2L 7051236 7051240 8 141 23.5 22.0 22.8 0.3 146 chr2L 7051094 intron milt + chr2L 7051167 intron milt + chr2L 7051240 intron milt + chr2L_8_7050001 chr2L_7050001 RAL-109_125b 392 chr2L 7081656 7081713 chr2L 7081787 7081829 16 130 11.5 6.5 9.0 1.6 173 chr2L 7081656 intron Pvf2 - chr2L 7081742 intron Pvf2 - chr2L 7081829 intron Pvf2 - chr2L_16_7080001 chr2L_7080001 RAL-109_125b 393 chr2L 7087799 7087859 chr2L 7088401 7088455 12 603 9.5 10.5 10.0 1.1 656 chr2L 7087799 intergenic not near genes chr2L 7088127 intergenic not near genes chr2L 7088455 intergenic not near genes chr2L_12_7085001 chr2L_7085001 RAL-109_125b 394 chr2L 7111704 7111792 chr2L 7111839 7111927 10 135 3.0 1.0 2.0 3.3 223 chr2L 7111704 intron Pvf3 - chr2L 7111816 intron Pvf3 - chr2L 7111927 intron Pvf3 - chr2L_10_7110001 chr2L_7110001 RAL-109_125b 395 chr2L 7125764 7125807 chr2L 7125929 7125972 11 165 5.0 10.0 7.5 1.3 208 chr2L 7125764 intron Pvf3 - chr2L 7125868 intron Pvf3 - chr2L 7125972 intron Pvf3 - chr2L_11_7125001 chr2L_7125001 RAL-109_125b 396 chr2L 7137941 7138000 chr2L 7138081 7138085 9 134 5.5 10.0 7.8 1.0 144 chr2L 7137941 intron Pvf3 - chr2L 7138013 intron Pvf3 - chr2L 7138085 intron Pvf3 - chr2L_9_7135001 chr2L_7135001 RAL-109_125b 397 chr2L 7152139 7152167 chr2L 7152265 7152293 5 126 27.5 22.5 25.0 0.2 154 chr2L 7152139 intron Pvf3 - chr2L 7152216 intron Pvf3 - chr2L 7152293 intron Pvf3 - chr2L_5_7150001 chr2L_7150001 RAL-109_125b 398 chr2L 7164545 7164585 chr2L 7164710 7164753 6 165 6.5 15.0 10.8 0.5 208 chr2L 7164545 intergenic not near genes chr2L 7164649 intergenic not near genes chr2L 7164753 intergenic not near genes chr2L_6_7160001 chr2L_7160001 RAL-109_125b 399 chr2L 7165744 7165800 chr2L 7165875 7165931 5 131 16.0 19.0 17.5 0.3 187 chr2L 7165744 intergenic not near genes chr2L 7165838 intergenic not near genes chr2L 7165931 intergenic not near genes chr2L_5_7165001 chr2L_7165001 RAL-109_125b 400 chr2L 7197951 7198021 chr2L 7198080 7198150 12 129 16.0 16.5 16.2 0.7 199 chr2L 7197951 intron CG4502 - chr2L 7198050 intron CG4502 - chr2L 7198150 intron CG4502 - chr2L_12_7195001 chr2L_7195001 RAL-109_125b 401 chr2L 7215233 7215270 chr2L 7215365 7215402 4 132 7.5 4.5 6.0 0.6 169 chr2L 7215233 intron CG13784 - chr2L 7215318 intron CG13784 - chr2L 7215402 intron CG13784 - chr2L_4_7215001 chr2L_7215001 RAL-109_125b 402 chr2L 7216794 7216839 chr2L 7216920 7216965 17 122 14.5 10.0 12.2 1.3 171 chr2L 7216794 intron CG13784 - chr2L 7216880 intron CG13784 - chr2L 7216965 intron CG13784 - chr2L_17_7215001 chr2L_7215001 RAL-109_125b 403 chr2L 7247017 7247084 chr2L 7247163 7247230 12 144 19.0 20.5 19.8 0.6 213 chr2L 7247017 intron Ndae1 - chr2L 7247124 intron Ndae1 - chr2L 7247230 intron Ndae1 - chr2L_12_7245001 chr2L_7245001 RAL-109_125b 404 chr2L 7268407 7268473 chr2L 7268537 7268603 8 129 14.5 18.5 16.5 0.5 196 chr2L 7268407 intron Wnt4 - chr2L 7268505 intron Wnt4 - chr2L 7268603 intron Wnt4 - chr2L_8_7265001 chr2L_7265001 RAL-109_125b 405 chr2L 7295976 7296019 chr2L 7296165 7296209 8 190 16.5 20.5 18.5 0.4 233 chr2L 7295976 intergenic not near genes chr2L 7296092 intergenic not near genes chr2L 7296209 intergenic not near genes chr2L_8_7295001 chr2L_7295001 RAL-109_125b 406 chr2L 7301251 7301267 chr2L 7301384 7301400 10 132 22.0 18.0 20.0 0.5 149 chr2L 7301251 intergenic not near genes chr2L 7301326 intergenic not near genes chr2L 7301400 intergenic not near genes chr2L_10_7300001 chr2L_7300001 RAL-109_125b 407 chr2L 7301268 7301330 chr2L 7301380 7301458 10 128 17.5 18.0 17.8 0.5 190 chr2L 7301268 intergenic not near genes chr2L 7301363 intergenic not near genes chr2L 7301458 intergenic not near genes chr2L_10_7300001 chr2L_7300001 RAL-109_125b 408 chr2L 7325870 7325936 chr2L 7326005 7326039 5 123 5.5 3.5 4.5 0.9 169 chr2L 7325870 intergenic not near genes chr2L 7325954 intergenic not near genes chr2L 7326039 intergenic not near genes chr2L_5_7325001 chr2L_7325001 RAL-109_125b 409 chr2L 7326437 7326484 chr2L 7326605 7326651 5 168 21.5 17.5 19.5 0.2 214 chr2L 7326437 intergenic not near genes chr2L 7326544 intergenic not near genes chr2L 7326651 intergenic not near genes chr2L_5_7325001 chr2L_7325001 RAL-109_125b 410 chr2L 7335157 7335234 chr2L 7335304 7335381 11 147 17.0 18.5 17.8 0.6 224 chr2L 7335157 intron Wnt6 + chr2L 7335269 intron Wnt6 + chr2L 7335381 intron Wnt6 + chr2L_11_7335001 chr2L_7335001 RAL-109_125b 411 chr2L 7343305 7343331 chr2L 7350470 7350496 roo 9 7164 11.5 8.0 9.8 0.8 7191 chr2L 7343305 intron Wnt6 + chr2L 7346900 intron Wnt6 + chr2L 7350496 intron Wnt6 + chr2L_9_7345001 chr2L_7345001 RAL-109_125b 412 chr2L 7343333 7343352 chr2L 7350453 7350490 roo 8 7144 7.5 6.0 6.8 1.0 7157 chr2L 7343333 intron Wnt6 + chr2L 7346912 intron Wnt6 + chr2L 7350490 intron Wnt6 + chr2L_8_7345001 chr2L_7345001 RAL-109_125b 413 chr2L 7351007 7351081 chr2L 7351165 7351198 8 146 7.5 8.5 8.0 0.9 191 chr2L 7351007 intron Wnt6 + chr2L 7351102 intron Wnt6 + chr2L 7351198 exon Wnt6 + chr2L_8_7350001 chr2L_7350001 RAL-109_125b 414 chr2L 7377852 7377902 chr2L 7377986 7378049 7 145 4.5 8.5 6.5 0.9 197 chr2L 7377852 5` UTR ninaC + chr2L 7377950 intron ninaC + chr2L 7378049 intron ninaC + chr2L_7_7375001 chr2L_7375001 RAL-109_125b 415 chr2L 7406900 7406971 chr2L 7407055 7407128 4 156 0.0 0.0 0.0 4.0 228 chr2L 7406900 intron CG5177 + chr2L 7407014 intron CG5177 + chr2L 7407128 intron CG5177 + chr2L_4_7405001 chr2L_7405001 RAL-109_125b 416 chr2L 7436148 7436220 chr2L 7436292 7436364 15 141 22.5 21.5 22.0 0.7 216 chr2L 7436148 intergenic not near genes chr2L 7436256 intergenic not near genes chr2L 7436364 intergenic not near genes chr2L_15_7435001 chr2L_7435001 RAL-109_125b 417 chr2L 7438784 7438799 chr2L 7438910 7438925 4 126 26.0 20.0 23.0 0.2 141 chr2L 7438784 intron CG5973 + chr2L 7438854 intron CG5973 + chr2L 7438925 intron CG5973 + chr2L_4_7435001 chr2L_7435001 RAL-109_125b 418 chr2L 7438800 7438844 chr2L 7438894 7438970 10 120 20.0 20.0 20.0 0.5 170 chr2L 7438800 intron CG5973 + chr2L 7438885 intron CG5973 + chr2L 7438970 intron CG5973 + chr2L_10_7435001 chr2L_7435001 RAL-109_125b 419 chr2L 7454661 7454679 chr2L 7454792 7454818 5 137 17.0 16.5 16.8 0.3 157 chr2L 7454661 intergenic Gr28b -,Gr28a - chr2L 7454740 intergenic Gr28b - chr2L 7454818 intergenic Gr28b - chr2L_5_7450001 chr2L_7450001 RAL-109_125b 420 chr2L 5904539 5904539 chr2L 7466148 7466148 4 1561609 25.0 28.5 26.8 0.1 1561609 chr2L 5904539 intron CG9021 - chr2L 6685344 exon CG11327 - chr2L 7466148 intergenic CG6055 + chr2L_4_6685001 chr2L_6685001 RAL-109_125b 421 chr2L 5904540 5904540 chr2L 7466149 7466149 6 1561609 25.5 29.5 27.5 0.2 1561609 chr2L 5904540 intron CG9021 - chr2L 6685344 exon CG11327 - chr2L 7466149 intergenic CG6055 + chr2L_6_6685001 chr2L_6685001 RAL-109_125b 422 chr2L 7489563 7489588 chr2L 7489719 7489734 4 154 6.5 0.0 3.2 1.0 171 chr2L 7489563 intron Ziz - chr2L 7489648 intron Ziz - chr2L 7489734 intron Ziz - chr2L_4_7485001 chr2L_7485001 RAL-109_125b 423 chr2L 7502714 7502753 chr2L 7502814 7502816 4 95 25.0 23.0 24.0 0.2 102 chr2L 7502714 intron RapGAP1 - chr2L 7502765 intron RapGAP1 - chr2L 7502816 intron RapGAP1 - chr2L_4_7500001 chr2L_7500001 RAL-109_125b 424 chr2L 7513722 7513794 chr2L 7513849 7513921 6 127 6.0 7.5 6.8 0.8 199 chr2L 7513722 intron RapGAP1 - chr2L 7513822 intron RapGAP1 - chr2L 7513921 intron RapGAP1 - chr2L_6_7510001 chr2L_7510001 RAL-109_125b 425 chr2L 7516124 7516189 chr2L 7516261 7516326 8 135 13.5 15.5 14.5 0.5 202 chr2L 7516124 intron RapGAP1 - chr2L 7516225 intron RapGAP1 - chr2L 7516326 intron RapGAP1 - chr2L_8_7515001 chr2L_7515001 RAL-109_125b 426 chr2L 7555199 7555218 chr2L 7555326 7555345 7 127 0.0 9.0 4.5 1.3 146 chr2L 7555199 intron RapGAP1 - chr2L 7555272 intron RapGAP1 - chr2L 7555345 intron RapGAP1 - chr2L_7_7555001 chr2L_7555001 RAL-109_125b 427 chr2L 7579141 7579184 chr2L 7579381 7579425 BS 9 240 4.0 0.5 2.2 2.8 284 chr2L 7579141 intergenic RapGAP1 - chr2L 7579283 intergenic RapGAP1 - chr2L 7579425 intergenic RapGAP1 - chr2L_9_7575001 chr2L_7575001 RAL-109_125b 428 chr2L 7579848 7579917 chr2L 7579974 7580049 18 129 21.0 22.0 21.5 0.8 201 chr2L 7579848 intergenic not near genes chr2L 7579948 intergenic not near genes chr2L 7580049 intergenic not near genes chr2L_18_7575001 chr2L_7575001 RAL-109_125b 429 chr2L 7587187 7587258 chr2L 7587327 7587368 11 132 19.0 18.5 18.8 0.6 181 chr2L 7587187 intergenic not near genes chr2L 7587278 intergenic not near genes chr2L 7587368 intergenic not near genes chr2L_11_7585001 chr2L_7585001 RAL-109_125b 430 chr2L 7621771 7621819 chr2L 7621913 7621961 4 140 16.5 15.5 16.0 0.2 190 chr2L 7621771 intergenic not near genes chr2L 7621866 intergenic not near genes chr2L 7621961 intergenic not near genes chr2L_4_7620001 chr2L_7620001 RAL-109_125b 431 chr2L 7640384 7640390 chr2L 7640515 7640521 4 131 24.5 16.0 20.2 0.2 137 chr2L 7640384 intergenic not near genes chr2L 7640452 intergenic not near genes chr2L 7640521 intergenic not near genes chr2L_4_7640001 chr2L_7640001 RAL-109_125b 432 chr2L 7653008 7653021 chr2L 7653152 7653165 6 144 18.0 6.0 12.0 0.5 157 chr2L 7653008 intron Slob - chr2L 7653086 intron Slob - chr2L 7653165 intron Slob - chr2L_6_7650001 chr2L_7650001 RAL-109_125b 433 chr2L 7655350 7655359 chr2L 7655490 7655498 4 139 20.5 16.0 18.2 0.2 148 chr2L 7655350 intron Slob - chr2L 7655424 intron Slob - chr2L 7655498 intron Slob - chr2L_4_7655001 chr2L_7655001 RAL-109_125b 434 chr2L 7655365 7655413 chr2L 7655488 7655553 6 135 14.5 16.0 15.2 0.4 188 chr2L 7655365 intron Slob - chr2L 7655459 intron Slob - chr2L 7655553 exon Slob - chr2L_6_7655001 chr2L_7655001 RAL-109_125b 435 chr2L 7671677 7671734 chr2L 7671829 7671886 12 152 0.0 10.0 5.0 2.0 209 chr2L 7671677 intron,intron Slob -,Myo28B1 + chr2L 7671782 intron,intron Slob -,Myo28B1 + chr2L 7671886 intron,intron Slob -,Myo28B1 + chr2L_12_7670001 chr2L_7670001 RAL-109_125b 436 chr2L 7685456 7685490 chr2L 7685577 7685612 17 121 11.0 5.5 8.2 1.8 156 chr2L 7685456 intron Myo28B1 + chr2L 7685534 intron Myo28B1 + chr2L 7685612 intron Myo28B1 + chr2L_17_7685001 chr2L_7685001 RAL-109_125b 437 chr2L 7685491 7685520 chr2L 7685574 7685648 13 116 8.5 4.5 6.5 1.7 157 chr2L 7685491 intron Myo28B1 + chr2L 7685570 intron Myo28B1 + chr2L 7685648 intron Myo28B1 + chr2L_13_7685001 chr2L_7685001 RAL-109_125b 438 chr2L 7702870 7702919 chr2L 7703063 7703137 24 209 6.5 8.0 7.2 2.9 267 chr2L 7702870 5` UTR Tep3 + chr2L 7703004 5` UTR Tep3 + chr2L 7703137 5` UTR Tep3 + chr2L_24_7700001 chr2L_7700001 RAL-109_125b 439 chr2L 7769764 7769832 chr2L 7769893 7769961 17 128 3.0 4.5 3.8 3.5 197 chr2L 7769764 intron CG7191 + chr2L 7769862 intron CG7191 + chr2L 7769961 intron CG7191 + chr2L_17_7765001 chr2L_7765001 RAL-109_125b 440 chr2L 7781286 7781308 chr2L 7781423 7781445 5 137 0.0 12.0 6.0 0.7 159 chr2L 7781286 3` UTR Uro + chr2L 7781366 3` UTR Uro + chr2L 7781445 intergenic CG7164 +,Uro + chr2L_5_7780001 chr2L_7780001 RAL-109_125b 441 chr2L 7854217 7854276 chr2L 7854344 7854403 10 127 16.5 19.5 18.0 0.5 186 chr2L 7854217 intron CG14535 - chr2L 7854310 intron CG14535 - chr2L 7854403 intron CG14535 - chr2L_10_7850001 chr2L_7850001 RAL-109_125b 442 chr2L 7867528 7867602 chr2L 7867672 7867729 25 139 11.0 7.0 9.0 2.5 201 chr2L 7867528 intron Proc - chr2L 7867628 intron Proc - chr2L 7867729 intron Proc - chr2L_25_7865001 chr2L_7865001 RAL-109_125b 443 chr2L 7887656 7887676 chr2L 7887788 7887808 4 132 19.0 26.0 22.5 0.2 152 chr2L 7887656 intergenic Spn28Da -,CG7102 - chr2L 7887732 3` UTR Spn28Da - chr2L 7887808 exon Spn28Da - chr2L_4_7885001 chr2L_7885001 RAL-109_125b 444 chr2L 7905578 7905646 chr2L 7905716 7905747 15 135 23.0 15.5 19.2 0.7 169 chr2L 7905578 intron Snoo - chr2L 7905662 intron Snoo - chr2L 7905747 intron Snoo - chr2L_15_7905001 chr2L_7905001 RAL-109_125b 445 chr2L 7922700 7922765 chr2L 7922831 7922896 17 125 23.5 21.0 22.2 0.7 196 chr2L 7922700 intron Snoo - chr2L 7922798 intron Snoo - chr2L 7922896 intron Snoo - chr2L_17_7920001 chr2L_7920001 RAL-109_125b 446 chr2L 7941180 7941193 chr2L 7941279 7941306 8 117 16.5 14.0 15.2 0.5 126 chr2L 7941180 intron Snoo - chr2L 7941243 intron Snoo - chr2L 7941306 intron Snoo - chr2L_8_7940001 chr2L_7940001 RAL-109_125b 447 chr2L 7958996 7959068 chr2L 7960457 7960507 pogo 18 1459 16.5 17.5 17.0 1.0 1511 chr2L 7958996 intron Snoo - chr2L 7959752 intron Snoo - chr2L 7960507 intron Snoo - chr2L_18_7955001 chr2L_7955001 RAL-109_125b 448 chr2L 7977040 7977051 chr2L 7984064 7984075 297 4 7025 17.5 7.0 12.2 0.3 7035 chr2L 7977040 intron Snoo - chr2L 7980558 intron Snoo - chr2L 7984075 intron,5` UTR Snoo -,CG7231 + chr2L_4_7980001 chr2L_7980001 RAL-109_125b 449 chr2L 7977070 7977112 chr2L 7984069 7984125 297 19 7017 6.0 8.5 7.2 2.3 7055 chr2L 7977070 intron Snoo - chr2L 7980598 intron Snoo - chr2L 7984125 intron,5` UTR Snoo -,CG7231 + chr2L_19_7980001 chr2L_7980001 RAL-109_125b 450 chr2L 7986879 7986912 chr2L 7987015 7987049 4 136 21.5 26.0 23.8 0.2 170 chr2L 7986879 3` UTR pes - chr2L 7986964 3` UTR pes - chr2L 7987049 3` UTR pes - chr2L_4_7985001 chr2L_7985001 RAL-109_125b 451 chr2L 7996994 7997061 chr2L 7997144 7997161 11 145 12.0 17.0 14.5 0.7 167 chr2L 7996994 intron CG7227 - chr2L 7997078 intron CG7227 - chr2L 7997161 intron CG7227 - chr2L_11_7995001 chr2L_7995001 RAL-109_125b 452 chr2L 7998523 7998565 chr2L 7998651 7998693 4 128 1.0 2.0 1.5 1.6 170 chr2L 7998523 intergenic Sirup + chr2L 7998608 intergenic Sirup + chr2L 7998693 intergenic Sirup + chr2L_4_7995001 chr2L_7995001 RAL-109_125b 453 chr2L 8002994 8003057 chr2L 8003126 8003189 13 132 1.5 11.0 6.2 1.8 195 chr2L 8002994 intron Wwox - chr2L 8003092 intron Wwox - chr2L 8003189 intron Wwox - chr2L_13_8000001 chr2L_8000001 RAL-109_125b 454 chr2L 8013569 8013579 chr2L 8018824 8018832 copia 4 5254 18.0 0.0 9.0 0.4 5263 chr2L 8013569 intron Tg + chr2L 8016200 intron Tg + chr2L 8018832 intron Tg + chr2L_4_8015001 chr2L_8015001 RAL-109_125b 455 chr2L 8013604 8013644 chr2L 8023590 8023630 copia 17 9985 4.0 8.0 6.0 2.4 10026 chr2L 8013604 intron Tg + chr2L 8018617 intron Tg + chr2L 8023630 intron Tg + chr2L_17_8015001 chr2L_8015001 RAL-109_125b 456 chr2L 8034565 8034590 chr2L 8034716 8034741 6 150 10.5 16.5 13.5 0.4 176 chr2L 8034565 intron,intron CG7367 -,Cka + chr2L 8034653 intron,intron CG7367 -,Cka + chr2L 8034741 intron,intron CG7367 -,Cka + chr2L_6_8030001 chr2L_8030001 RAL-109_125b 457 chr2L 8044068 8044117 chr2L 8044190 8044246 13 128 24.0 19.5 21.8 0.6 178 chr2L 8044068 exon CG7466 + chr2L 8044157 intron CG7466 + chr2L 8044246 intron CG7466 + chr2L_13_8040001 chr2L_8040001 RAL-109_125b 458 chr2L 8086465 8086516 chr2L 8086620 8086671 13 153 23.0 22.5 22.8 0.5 206 chr2L 8086465 intron Bsg + chr2L 8086568 intron Bsg + chr2L 8086671 intron Bsg + chr2L_13_8085001 chr2L_8085001 RAL-109_125b 459 chr2L 8165998 8166059 chr2L 8166138 8166161 11 134 19.5 24.5 22.0 0.5 163 chr2L 8165998 intron Piezo + chr2L 8166080 intron Piezo + chr2L 8166161 intron Piezo + chr2L_11_8165001 chr2L_8165001 RAL-109_125b 460 chr2L 8171280 8171291 chr2L 8171397 8171422 5 128 0.0 13.5 6.8 0.6 142 chr2L 8171280 intron Piezo + chr2L 8171351 intron Piezo + chr2L 8171422 intron Piezo + chr2L_5_8170001 chr2L_8170001 RAL-109_125b 461 chr2L 8184880 8184946 chr2L 8185021 8185087 13 138 22.0 21.5 21.8 0.6 207 chr2L 8184880 intron Piezo + chr2L 8184984 intron Piezo + chr2L 8185087 intron Piezo + chr2L_13_8180001 chr2L_8180001 RAL-109_125b 462 chr2L 8231894 8232020 chr2L 8232023 8232148 10 152 17.0 16.5 16.8 0.6 254 chr2L 8231894 intron Pvr - chr2L 8232021 intron Pvr - chr2L 8232148 intron Pvr - chr2L_10_8230001 chr2L_8230001 RAL-109_125b 463 chr2L 8244682 8244747 chr2L 8244854 8244919 13 167 16.5 17.5 17.0 0.7 237 chr2L 8244682 intron CG8086 - chr2L 8244800 intron CG8086 - chr2L 8244919 intron CG8086 - chr2L_13_8240001 chr2L_8240001 RAL-109_125b 464 chr2L 8246517 8246542 chr2L 8246659 8246701 9 155 24.5 24.0 24.2 0.4 184 chr2L 8246517 intron CG8086 - chr2L 8246609 intron CG8086 - chr2L 8246701 intron CG8086 - chr2L_9_8245001 chr2L_8245001 RAL-109_125b 465 chr2L 8271582 8271645 chr2L 8271708 8271761 4 124 12.0 16.0 14.0 0.3 179 chr2L 8271582 intron Btk29A - chr2L 8271672 intron Btk29A - chr2L 8271761 intron Btk29A - chr2L_4_8270001 chr2L_8270001 RAL-109_125b 466 chr2L 8286249 8286318 chr2L 8286386 8286435 20 132 19.5 21.5 20.5 0.9 186 chr2L 8286249 intron Btk29A - chr2L 8286342 intron Btk29A - chr2L 8286435 intron Btk29A - chr2L_20_8285001 chr2L_8285001 RAL-109_125b 467 chr2L 8288625 8288701 chr2L 8288770 8288825 19 139 24.0 26.5 25.2 0.7 200 chr2L 8288625 intron Btk29A - chr2L 8288725 intron Btk29A - chr2L 8288825 intron Btk29A - chr2L_19_8285001 chr2L_8285001 RAL-109_125b 468 chr2L 8322906 8322935 chr2L 8323032 8323061 8 126 9.0 12.0 10.5 0.7 155 chr2L 8322906 exon CG7781 - chr2L 8322984 intron CG7781 - chr2L 8323061 intron CG7781 - chr2L_8_8320001 chr2L_8320001 RAL-109_125b 469 chr2L 8336904 8336961 chr2L 8337013 8337084 6 123 9.0 12.5 10.8 0.5 180 chr2L 8336904 intergenic not near genes chr2L 8336994 intergenic not near genes chr2L 8337084 intergenic not near genes chr2L_6_8335001 chr2L_8335001 RAL-109_125b 470 chr2L 8412872 8412917 chr2L 8413008 8413053 17 135 26.0 26.0 26.0 0.6 181 chr2L 8412872 3` UTR CG13398 - chr2L 8412962 3` UTR CG13398 - chr2L 8413053 3` UTR CG13398 - chr2L_17_8410001 chr2L_8410001 RAL-109_125b 471 chr2L 8452382 8452437 chr2L 8461603 8461658 roo 26 9220 14.5 7.5 11.0 2.2 9276 chr2L 8452382 intron fu12 - chr2L 8457020 intron fu12 - chr2L 8461658 intron fu12 - chr2L_26_8455001 chr2L_8455001 RAL-109_125b 472 chr2L 8477203 8477232 chr2L 8477689 8477718 5 485 20.5 23.5 22.0 0.2 515 chr2L 8477203 intron d + chr2L 8477460 intron,intron d +,CheA29a + chr2L 8477718 intron,exon d +,CheA29a + chr2L_5_8475001 chr2L_8475001 RAL-109_125b 473 chr2L 8477240 8477262 chr2L 8477681 8477748 7 479 22.0 22.0 22.0 0.3 508 chr2L 8477240 intron d + chr2L 8477494 intron,exon d +,CheA29a + chr2L 8477748 intron,exon d +,CheA29a + chr2L_7_8475001 chr2L_8475001 RAL-109_125b 474 chr2L 8498159 8498233 chr2L 8498290 8498347 10 128 20.0 17.0 18.5 0.5 188 chr2L 8498159 intron Dh31 - chr2L 8498253 intron Dh31 - chr2L 8498347 intron Dh31 - chr2L_10_8495001 chr2L_8495001 RAL-109_125b 475 chr2L 8502618 8502682 chr2L 8502752 8502781 9 130 19.5 19.5 19.5 0.4 163 chr2L 8502618 intron Dh31 - chr2L 8502700 intron Dh31 - chr2L 8502781 intron Dh31 - chr2L_9_8500001 chr2L_8500001 RAL-109_125b 476 chr2L 8510093 8510148 chr2L 8510232 8510287 8 139 20.0 15.5 17.8 0.4 194 chr2L 8510093 exon CG13096 - chr2L 8510190 intron CG13096 - chr2L 8510287 intron CG13096 - chr2L_8_8510001 chr2L_8510001 RAL-109_125b 477 chr2L 8551391 8551424 chr2L 8551656 8551689 4 265 21.0 12.5 16.8 0.2 298 chr2L 8551391 intron Sema-1a + chr2L 8551540 intron Sema-1a + chr2L 8551689 intron Sema-1a + chr2L_4_8550001 chr2L_8550001 RAL-109_125b 478 chr2L 8587256 8587311 chr2L 8587383 8587438 18 126 20.0 15.0 17.5 1.0 182 chr2L 8587256 intron Sema-1a + chr2L 8587347 intron Sema-1a + chr2L 8587438 intron Sema-1a + chr2L_18_8585001 chr2L_8585001 RAL-109_125b 479 chr2L 8594453 8594477 chr2L 8601523 8601581 297 5 7097 8.0 6.0 7.0 0.6 7128 chr2L 8594453 intron,3` UTR Sema-1a +,CR43855 - chr2L 8598017 intron Sema-1a + chr2L 8601581 intron Sema-1a + chr2L_5_8595001 chr2L_8595001 RAL-109_125b 480 chr2L 8612765 8612795 chr2L 8613040 8613054 6 272 17.0 18.0 17.5 0.3 289 chr2L 8612765 intron Sema-1a + chr2L 8612910 intron Sema-1a + chr2L 8613054 intron Sema-1a + chr2L_6_8610001 chr2L_8610001 RAL-109_125b 481 chr2L 8612804 8612870 chr2L 8612931 8612997 26 198 5.0 7.0 6.0 3.7 193 chr2L 8612804 intron Sema-1a + chr2L 8612900 intron Sema-1a + chr2L 8612997 intron Sema-1a + chr2L_26_8610001 chr2L_8610001 RAL-109_125b 482 chr2L 8614155 8614212 chr2L 8614283 8614357 7 134 27.5 28.5 28.0 0.2 202 chr2L 8614155 intron Sema-1a + chr2L 8614256 intron Sema-1a + chr2L 8614357 intron Sema-1a + chr2L_7_8610001 chr2L_8610001 RAL-109_125b 483 chr2L 8654215 8654240 chr2L 8654337 8654394 9 143 9.0 13.5 11.2 0.7 179 chr2L 8654215 intron Sema-1a + chr2L 8654304 intron Sema-1a + chr2L 8654394 intron Sema-1a + chr2L_9_8650001 chr2L_8650001 RAL-109_125b 484 chr2L 8665194 8665258 chr2L 8665323 8665388 14 130 21.5 23.0 22.2 0.6 194 chr2L 8665194 intron Sema-1a + chr2L 8665291 intron Sema-1a + chr2L 8665388 intron Sema-1a + chr2L_14_8665001 chr2L_8665001 RAL-109_125b 485 chr2L 8672743 8672792 chr2L 8672873 8672921 9 129 20.0 16.5 18.2 0.5 178 chr2L 8672743 5` UTR Glt + chr2L 8672832 intron Glt + chr2L 8672921 intron Glt + chr2L_9_8670001 chr2L_8670001 RAL-109_125b 486 chr2L 8687033 8687095 chr2L 8687187 8687249 6 153 16.0 14.5 15.2 0.4 216 chr2L 8687033 exon Trs23 + chr2L 8687141 intergenic Hnf4 -,Trs23 + chr2L 8687249 3` UTR Hnf4 - chr2L_6_8685001 chr2L_8685001 RAL-109_125b 487 chr2L 8695837 8695895 chr2L 8695967 8696025 6 129 31.0 26.0 28.5 0.2 188 chr2L 8695837 intron Hnf4 - chr2L 8695931 intron Hnf4 - chr2L 8696025 intron Hnf4 - chr2L_6_8695001 chr2L_8695001 RAL-109_125b 488 chr2L 8716156 8716184 chr2L 8716284 8716302 8 127 29.5 28.5 29.0 0.3 146 chr2L 8716156 intron raw - chr2L 8716229 intron raw - chr2L 8716302 intron raw - chr2L_8_8715001 chr2L_8715001 RAL-109_125b 489 chr2L 8716185 8716222 chr2L 8716272 8716350 10 121 27.0 27.5 27.2 0.4 165 chr2L 8716185 intron raw - chr2L 8716268 intron raw - chr2L 8716350 intron raw - chr2L_10_8715001 chr2L_8715001 RAL-109_125b 490 chr2L 8719166 8719233 chr2L 8719292 8719361 10 126 22.5 22.0 22.2 0.4 195 chr2L 8719166 intron raw - chr2L 8719264 intron raw - chr2L 8719361 intron raw - chr2L_10_8715001 chr2L_8715001 RAL-109_125b 491 chr2L 8723071 8723074 chr2L 8731498 8731501 Tirant 5 8427 25.0 5.0 15.0 0.3 8430 chr2L 8723071 intron raw - chr2L 8727286 intron raw - chr2L 8731501 intron raw - chr2L_5_8725001 chr2L_8725001 RAL-109_125b 492 chr2L 8723075 8723097 chr2L 8731497 8731524 Tirant 9 8426 19.0 5.0 12.0 0.7 8449 chr2L 8723075 intron raw - chr2L 8727300 intron raw - chr2L 8731524 intron raw - chr2L_9_8725001 chr2L_8725001 RAL-109_125b 493 chr2L 8723098 8723144 chr2L 8731494 8731563 Tirant 15 8420 7.5 4.0 5.8 2.2 8465 chr2L 8723098 intron raw - chr2L 8727330 intron raw - chr2L 8731563 intron raw - chr2L_15_8725001 chr2L_8725001 RAL-109_125b 494 chr2L 8736235 8736257 chr2L 8736365 8736387 9 130 1.5 15.0 8.2 1.0 152 chr2L 8736235 intron raw - chr2L 8736311 intron raw - chr2L 8736387 intron raw - chr2L_9_8735001 chr2L_8735001 RAL-109_125b 495 chr2L 8772740 8772760 chr2L 8772875 8772895 4 135 18.5 10.0 14.2 0.3 155 chr2L 8772740 intergenic CG9466 -,CG9465 - chr2L 8772818 intergenic CG9466 -,CG9465 - chr2L 8772895 intergenic CG9466 - chr2L_4_8770001 chr2L_8770001 RAL-109_125b 496 chr2L 8791275 8791303 chr2L 8791402 8791430 6 127 17.5 13.5 15.5 0.4 155 chr2L 8791275 intergenic not near genes chr2L 8791352 intergenic not near genes chr2L 8791430 intergenic not near genes chr2L_6_8790001 chr2L_8790001 RAL-109_125b 497 chr2L 8809115 8809186 chr2L 8809243 8809314 12 126 13.5 13.0 13.2 0.8 199 chr2L 8809115 intergenic not near genes chr2L 8809214 intergenic not near genes chr2L 8809314 intergenic not near genes chr2L_12_8805001 chr2L_8805001 RAL-109_125b 498 chr2L 8902415 8902470 chr2L 8902612 8902667 10 196 12.5 17.0 14.8 0.6 252 chr2L 8902415 intron CG34398 + chr2L 8902541 intron CG34398 + chr2L 8902667 intron CG34398 + chr2L_10_8900001 chr2L_8900001 RAL-109_125b 499 chr2L 8921688 8921756 chr2L 8921814 8921851 9 116 20.0 19.0 19.5 0.4 163 chr2L 8921688 intron CG34398 + chr2L 8921770 intron CG34398 + chr2L 8921851 intron CG34398 + chr2L_9_8920001 chr2L_8920001 RAL-109_125b 500 chr2L 8939634 8939681 chr2L 8939764 8939811 7 130 20.5 21.0 20.8 0.3 177 chr2L 8939634 3` UTR Tsp29Fb + chr2L 8939722 3` UTR Tsp29Fb + chr2L 8939811 3` UTR CG9510 - chr2L_7_8935001 chr2L_8935001 RAL-109_125b 501 chr2L 8956200 8956244 chr2L 8956327 8956376 4 131 8.5 12.0 10.2 0.4 176 chr2L 8956200 intron CG31886 - chr2L 8956288 intron CG31886 - chr2L 8956376 intron CG31886 - chr2L_4_8955001 chr2L_8955001 RAL-109_125b 502 chr2L 8999936 8999981 chr2L 9000040 9000077 12 120 16.5 19.0 17.8 0.6 141 chr2L 8999936 intergenic Try29F + chr2L 9000006 intergenic Try29F + chr2L 9000077 intergenic Try29F + chr2L_12_9000001 chr2L_9000001 RAL-109_125b 503 chr2L 9000236 9000308 chr2L 9007795 9007894 roo 30 7559 7.0 5.5 6.2 4.2 7658 chr2L 9000236 intergenic Try29F + chr2L 9004065 intergenic not near genes chr2L 9007894 intergenic not near genes chr2L_30_9000001 chr2L_9000001 RAL-109_125b 504 chr2L 9023115 9023124 chr2L 9023262 9023271 5 146 32.0 25.0 28.5 0.2 156 chr2L 9023115 intergenic not near genes chr2L 9023193 intergenic not near genes chr2L 9023271 intergenic not near genes chr2L_5_9020001 chr2L_9020001 RAL-109_125b 505 chr2L 9023126 9023181 chr2L 9023258 9023276 11 134 24.0 24.0 24.0 0.4 150 chr2L 9023126 intergenic not near genes chr2L 9023201 intergenic not near genes chr2L 9023276 intergenic not near genes chr2L_11_9020001 chr2L_9020001 RAL-109_125b 506 chr2L 9027941 9027984 chr2L 9028075 9028112 9 133 7.0 0.0 3.5 2.0 171 chr2L 9027941 intron,intron CG9582 -,CR44352 - chr2L 9028026 intron,intron CG9582 -,CR44352 - chr2L 9028112 intron,intron CG9582 -,CR44352 - chr2L_9_9025001 chr2L_9025001 RAL-109_125b 507 chr2L 9039982 9040006 chr2L 9040119 9040138 9 136 25.5 19.5 22.5 0.4 156 chr2L 9039982 intergenic not near genes chr2L 9040060 intergenic not near genes chr2L 9040138 intergenic not near genes chr2L_9_9040001 chr2L_9040001 RAL-109_125b 508 chr2L 9040018 9040053 chr2L 9040155 9040190 11 136 21.5 21.5 21.5 0.5 172 chr2L 9040018 intergenic not near genes chr2L 9040104 intergenic not near genes chr2L 9040190 intergenic not near genes chr2L_11_9040001 chr2L_9040001 RAL-109_125b 509 chr2L 9044069 9044128 chr2L 9044206 9044249 7 137 13.5 15.0 14.2 0.5 180 chr2L 9044069 intergenic not near genes chr2L 9044159 intergenic not near genes chr2L 9044249 intergenic not near genes chr2L_7_9040001 chr2L_9040001 RAL-109_125b 510 chr2L 9053388 9053430 chr2L 9053642 9053722 4 279 8.0 5.5 6.8 0.5 334 chr2L 9053388 exon CG31708 - chr2L 9053555 intron CG31708 - chr2L 9053722 intron CG31708 - chr2L_4_9050001 chr2L_9050001 RAL-109_125b 511 chr2L 9073219 9073288 chr2L 9073356 9073424 14 134 20.5 25.5 23.0 0.6 205 chr2L 9073219 intergenic not near genes chr2L 9073322 intergenic not near genes chr2L 9073424 intergenic not near genes chr2L_14_9070001 chr2L_9070001 RAL-109_125b 512 chr2L 9084336 9084340 chr2L 16217660 16217660 13 7133321 34.5 35.0 34.8 0.4 7133324 chr2L 9084336 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_13_12650001 chr2L_12650001 RAL-109_125b 513 chr2L 9148532 9148606 chr2L 9148669 9148743 7 133 14.5 13.0 13.8 0.5 211 chr2L 9148532 intron CG32982 + chr2L 9148638 intron CG32982 + chr2L 9148743 intron CG32982 + chr2L_7_9145001 chr2L_9145001 RAL-109_125b 514 chr2L 9156543 9156582 chr2L 9156631 9156688 8 118 24.5 23.5 24.0 0.3 145 chr2L 9156543 exon CG32982 + chr2L 9156616 intron CG32982 + chr2L 9156688 intron CG32982 + chr2L_8_9155001 chr2L_9155001 RAL-109_125b 515 chr2L 9158747 9158819 chr2L 9158894 9158969 9 147 15.0 5.5 10.2 0.8 222 chr2L 9158747 intron CG32982 + chr2L 9158858 intron CG32982 + chr2L 9158969 intron CG32982 + chr2L_9_9155001 chr2L_9155001 RAL-109_125b 516 chr2L 9190895 9190960 chr2L 9191032 9191065 4 126 18.0 16.5 17.2 0.2 170 chr2L 9190895 intron tai + chr2L 9190980 intron tai + chr2L 9191065 intron tai + chr2L_4_9190001 chr2L_9190001 RAL-109_125b 517 chr2L 9217929 9217949 chr2L 9222766 9222786 Doc 6 4837 14.5 9.0 11.8 0.5 4857 chr2L 9217929 intron tai + chr2L 9220358 intron tai + chr2L 9222786 intron tai + chr2L_6_9220001 chr2L_9220001 RAL-109_125b 518 chr2L 9217954 9217991 chr2L 9222762 9222821 Doc 16 4835 6.5 8.0 7.2 2.0 4867 chr2L 9217954 intron tai + chr2L 9220388 intron tai + chr2L 9222821 intron tai + chr2L_16_9220001 chr2L_9220001 RAL-109_125b 519 chr2L 9247201 9247222 chr2L 9247332 9247353 7 131 14.0 14.0 14.0 0.5 152 chr2L 9247201 3` UTR tai + chr2L 9247277 3` UTR tai + chr2L 9247353 3` UTR tai + chr2L_7_9245001 chr2L_9245001 RAL-109_125b 520 chr2L 9273893 9273938 chr2L 9279382 9279427 14 5490 21.0 37.0 29.0 0.5 5534 chr2L 9273893 intron Ggamma30A + chr2L 9276660 intron Ggamma30A + chr2L 9279427 intron Ggamma30A + chr2L_14_9275001 chr2L_9275001 RAL-109_125b 521 chr2L 9279947 9280011 chr2L 9280091 9280144 4 140 7.0 7.5 7.2 0.5 197 chr2L 9279947 intron Ggamma30A + chr2L 9280046 intron Ggamma30A + chr2L 9280144 intron Ggamma30A + chr2L_4_9280001 chr2L_9280001 RAL-109_125b 522 chr2L 9281536 9281607 chr2L 9281670 9281741 18 133 7.5 8.5 8.0 2.0 205 chr2L 9281536 intron Ggamma30A + chr2L 9281638 intron Ggamma30A + chr2L 9281741 intron Ggamma30A + chr2L_18_9280001 chr2L_9280001 RAL-109_125b 523 chr2L 9283158 9283182 chr2L 9283285 9283309 10 126 18.0 13.0 15.5 0.6 151 chr2L 9283158 intron Ggamma30A + chr2L 9283234 intron Ggamma30A + chr2L 9283309 intron Ggamma30A + chr2L_10_9280001 chr2L_9280001 RAL-109_125b 524 chr2L 9284984 9285047 chr2L 9285100 9285141 11 114 16.5 17.5 17.0 0.6 157 chr2L 9284984 intron Ggamma30A + chr2L 9285062 intron Ggamma30A + chr2L 9285141 intron Ggamma30A + chr2L_11_9285001 chr2L_9285001 RAL-109_125b 525 chr2L 9287281 9287429 chr2L 9287427 9287564 22 140 8.0 8.5 8.2 2.4 283 chr2L 9287281 intron Ggamma30A + chr2L 9287422 intron Ggamma30A + chr2L 9287564 intron Ggamma30A + chr2L_22_9285001 chr2L_9285001 RAL-109_125b 526 chr2L 9297007 9297072 chr2L 9297148 9297213 14 141 18.0 18.5 18.2 0.7 206 chr2L 9297007 3` UTR Ggamma30A + chr2L 9297110 3` UTR Ggamma30A + chr2L 9297213 3` UTR Ggamma30A + chr2L_14_9295001 chr2L_9295001 RAL-109_125b 527 chr2L 9297329 9297374 chr2L 9297456 9297501 22 126 13.0 9.5 11.2 1.8 172 chr2L 9297329 3` UTR Ggamma30A + chr2L 9297415 3` UTR Ggamma30A + chr2L 9297501 3` UTR Ggamma30A + chr2L_22_9295001 chr2L_9295001 RAL-109_125b 528 chr2L 9297380 9297402 chr2L 9297455 9297529 7 119 8.0 10.0 9.0 0.7 149 chr2L 9297380 3` UTR Ggamma30A + chr2L 9297454 3` UTR Ggamma30A + chr2L 9297529 3` UTR Ggamma30A + chr2L_7_9295001 chr2L_9295001 RAL-109_125b 529 chr2L 9303311 9303481 chr2L 9303464 9303608 16 148 22.0 19.5 20.8 0.7 297 chr2L 9303311 intergenic not near genes chr2L 9303460 intergenic not near genes chr2L 9303608 intergenic not near genes chr2L_16_9300001 chr2L_9300001 RAL-109_125b 530 chr2L 9304454 9304505 chr2L 9304583 9304612 7 125 8.0 13.5 10.8 0.6 158 chr2L 9304454 3` UTR CR42844 - chr2L 9304533 3` UTR CR42844 - chr2L 9304612 3` UTR CR42844 - chr2L_7_9300001 chr2L_9300001 RAL-109_125b 531 chr2L 9334970 9335001 chr2L 9335099 9335130 6 129 16.0 5.5 10.8 0.5 160 chr2L 9334970 intron Eaat1 + chr2L 9335050 intron Eaat1 + chr2L 9335130 intron Eaat1 + chr2L_6_9335001 chr2L_9335001 RAL-109_125b 532 chr2L 9347579 9347683 chr2L 9347721 9347819 4 140 0.0 0.0 0.0 4.0 240 chr2L 9347579 intergenic not near genes chr2L 9347699 intergenic not near genes chr2L 9347819 intergenic not near genes chr2L_4_9345001 chr2L_9345001 RAL-109_125b 533 chr2L 9362102 9362151 chr2L 9362230 9362279 10 127 6.0 9.0 7.5 1.2 177 chr2L 9362102 intergenic not near genes chr2L 9362190 intergenic not near genes chr2L 9362279 intergenic not near genes chr2L_10_9360001 chr2L_9360001 RAL-109_125b 534 chr2L 9364281 9364334 chr2L 9364427 9364476 5 145 0.0 9.5 4.8 0.9 195 chr2L 9364281 intergenic CR43404 + chr2L 9364378 intron CR43404 + chr2L 9364476 5` UTR CR43404 + chr2L_5_9360001 chr2L_9360001 RAL-109_125b 535 chr2L 9370486 9370558 chr2L 9370615 9370681 10 126 18.5 21.0 19.8 0.5 195 chr2L 9370486 3` UTR Shawl - chr2L 9370584 3` UTR Shawl - chr2L 9370681 3` UTR Shawl - chr2L_10_9370001 chr2L_9370001 RAL-109_125b 536 chr2L 9380195 9380253 chr2L 9380340 9380399 7 140 23.5 20.0 21.8 0.3 204 chr2L 9380195 exon Shawl - chr2L 9380297 intron Shawl - chr2L 9380399 intron Shawl - chr2L_7_9380001 chr2L_9380001 RAL-109_125b 537 chr2L 9387205 9387275 chr2L 9387353 9387423 14 148 10.5 11.0 10.8 1.2 218 chr2L 9387205 intron Shawl - chr2L 9387314 intron Shawl - chr2L 9387423 intron,5` UTR Shawl -,Aldh + chr2L_14_9385001 chr2L_9385001 RAL-109_125b 538 chr2L 9391637 9391696 chr2L 9391774 9391833 15 136 15.0 22.5 18.8 0.8 196 chr2L 9391637 intron Shawl - chr2L 9391735 intron Shawl - chr2L 9391833 intron Shawl - chr2L_15_9390001 chr2L_9390001 RAL-109_125b 539 chr2L 9393450 9393524 chr2L 9396467 9396514 jockey 24 3015 8.0 9.5 8.8 2.4 3064 chr2L 9393450 intron Shawl - chr2L 9394982 intron Shawl - chr2L 9396514 intron Shawl - chr2L_24_9390001 chr2L_9390001 RAL-109_125b 540 chr2L 9396930 9396991 chr2L 9397170 9397234 8 242 33.5 33.0 33.2 0.2 304 chr2L 9396930 intron Shawl - chr2L 9397082 intron,3` UTR Shawl -,CG4438 - chr2L 9397234 intron,exon Shawl -,CG4438 - chr2L_8_9395001 chr2L_9395001 RAL-109_125b 541 chr2L 9407857 9407904 chr2L 9407989 9408036 15 130 7.5 8.5 8.0 1.7 179 chr2L 9407857 intron Shawl - chr2L 9407946 intron Shawl - chr2L 9408036 intron Shawl - chr2L_15_9405001 chr2L_9405001 RAL-109_125b 542 chr2L 9417136 9417184 chr2L 9417273 9417315 12 134 23.5 23.0 23.2 0.5 179 chr2L 9417136 intron Mco1 + chr2L 9417226 intron Mco1 + chr2L 9417315 intron Mco1 + chr2L_12_9415001 chr2L_9415001 RAL-109_125b 543 chr2L 9439577 9439646 chr2L 9439705 9439779 12 128 18.0 16.0 17.0 0.7 202 chr2L 9439577 intron numb + chr2L 9439678 intron numb + chr2L 9439779 intron numb + chr2L_12_9435001 chr2L_9435001 RAL-109_125b 544 chr2L 9439902 9439958 chr2L 9440041 9440097 12 139 5.5 13.5 9.5 1.1 195 chr2L 9439902 intron numb + chr2L 9440000 intron numb + chr2L 9440097 intron,exon numb +,CG33723 - chr2L_12_9435001 chr2L_9435001 RAL-109_125b 545 chr2L 9446256 9446297 chr2L 9446390 9446431 5 134 0.0 0.0 0.0 5.0 175 chr2L 9446256 intron numb + chr2L 9446344 intron numb + chr2L 9446431 intron numb + chr2L_5_9445001 chr2L_9445001 RAL-109_125b 546 chr2L 9448884 9448919 chr2L 9449021 9449056 4 131 11.5 20.5 16.0 0.2 172 chr2L 9448884 intron numb + chr2L 9448970 intron numb + chr2L 9449056 intron numb + chr2L_4_9445001 chr2L_9445001 RAL-109_125b 547 chr2L 9454934 9455006 chr2L 9455086 9455160 16 151 21.5 19.0 20.2 0.8 226 chr2L 9454934 intron numb + chr2L 9455047 intron numb + chr2L 9455160 intron numb + chr2L_16_9455001 chr2L_9455001 RAL-109_125b 548 chr2L 9456880 9457101 chr2L 9457011 9457223 24 127 22.5 24.5 23.5 1.0 343 chr2L 9456880 intron numb + chr2L 9457052 intron numb + chr2L 9457223 intron numb + chr2L_24_9455001 chr2L_9455001 RAL-109_125b 549 chr2L 9460713 9460780 chr2L 9460849 9460926 5 144 21.0 15.0 18.0 0.3 213 chr2L 9460713 exon numb + chr2L 9460820 intron numb + chr2L 9460926 intron numb + chr2L_5_9460001 chr2L_9460001 RAL-109_125b 550 chr2L 9506387 9506448 chr2L 9506587 9506647 12 200 23.0 18.5 20.8 0.6 260 chr2L 9506387 intron CG33298 + chr2L 9506517 intron CG33298 + chr2L 9506647 intron CG33298 + chr2L_12_9505001 chr2L_9505001 RAL-109_125b 551 chr2L 9522976 9523040 chr2L 9523110 9523174 17 130 24.5 25.5 25.0 0.7 198 chr2L 9522976 intron Oatp30B + chr2L 9523075 intron Oatp30B + chr2L 9523174 5` UTR Oatp30B + chr2L_17_9520001 chr2L_9520001 RAL-109_125b 552 chr2L 9527213 9527308 chr2L 9527340 9527440 10 129 17.0 17.0 17.0 0.6 227 chr2L 9527213 intron Oatp30B + chr2L 9527326 intron Oatp30B + chr2L 9527440 intron Oatp30B + chr2L_10_9525001 chr2L_9525001 RAL-109_125b 553 chr2L 9532234 9532294 chr2L 9532375 9532424 16 133 29.5 26.5 28.0 0.6 190 chr2L 9532234 intron Oatp30B + chr2L 9532329 intron Oatp30B + chr2L 9532424 intron Oatp30B + chr2L_16_9530001 chr2L_9530001 RAL-109_125b 554 chr2L 9565804 9565872 chr2L 9565940 9566008 24 134 18.0 19.0 18.5 1.2 204 chr2L 9565804 intron jp - chr2L 9565906 intron jp - chr2L 9566008 intron jp - chr2L_24_9565001 chr2L_9565001 RAL-109_125b 555 chr2L 9601628 9601856 chr2L 9601766 9601986 16 134 18.0 15.0 16.5 0.9 358 chr2L 9601628 intergenic not near genes chr2L 9601807 intergenic not near genes chr2L 9601986 intergenic not near genes chr2L_16_9600001 chr2L_9600001 RAL-109_125b 556 chr2L 9619462 9619484 chr2L 9619849 9619866 4 386 23.0 12.5 17.8 0.2 404 chr2L 9619462 intron GlcAT-S + chr2L 9619664 intron GlcAT-S + chr2L 9619866 intron GlcAT-S + chr2L_4_9615001 chr2L_9615001 RAL-109_125b 557 chr2L 9619486 9619510 chr2L 9619843 9619890 6 378 22.0 12.0 17.0 0.3 404 chr2L 9619486 intron GlcAT-S + chr2L 9619688 intron GlcAT-S + chr2L 9619890 intron GlcAT-S + chr2L_6_9615001 chr2L_9615001 RAL-109_125b 558 chr2L 9665592 9665638 chr2L 9665743 9665806 13 174 16.5 11.5 14.0 0.9 214 chr2L 9665592 intergenic not near genes chr2L 9665699 intergenic not near genes chr2L 9665806 intergenic not near genes chr2L_13_9665001 chr2L_9665001 RAL-109_125b 559 chr2L 9685594 9685614 chr2L 9685721 9685739 9 127 16.0 20.0 18.0 0.5 145 chr2L 9685594 intron Pka-C1 - chr2L 9685666 intron Pka-C1 - chr2L 9685739 intron Pka-C1 - chr2L_9_9685001 chr2L_9685001 RAL-109_125b 560 chr2L 9719737 9719785 chr2L 9719870 9719915 10 132 0.0 8.0 4.0 2.0 178 chr2L 9719737 intron Nckx30C - chr2L 9719826 intron Nckx30C - chr2L 9719915 intron Nckx30C - chr2L_10_9715001 chr2L_9715001 RAL-109_125b 561 chr2L 9770727 9770739 chr2L 9770879 9770892 4 152 27.0 27.0 27.0 0.1 165 chr2L 9770727 intron ppk18 - chr2L 9770810 intron ppk18 - chr2L 9770892 exon ppk18 - chr2L_4_9770001 chr2L_9770001 RAL-109_125b 562 chr2L 9775945 9776002 chr2L 9776077 9776134 15 132 21.0 19.0 20.0 0.7 189 chr2L 9775945 intergenic not near genes chr2L 9776040 intergenic not near genes chr2L 9776134 intergenic not near genes chr2L_15_9775001 chr2L_9775001 RAL-109_125b 563 chr2L 9837384 9837447 chr2L 9837512 9837575 9 128 8.0 6.5 7.2 1.1 191 chr2L 9837384 intron nAChRalpha6 - chr2L 9837480 intron nAChRalpha6 - chr2L 9837575 intron nAChRalpha6 - chr2L_9_9835001 chr2L_9835001 RAL-109_125b 564 chr2L 9862340 9862358 chr2L 9862481 9862516 8 156 0.0 9.0 4.5 1.5 176 chr2L 9862340 intron nAChRalpha6 - chr2L 9862428 intron nAChRalpha6 - chr2L 9862516 intron nAChRalpha6 - chr2L_8_9860001 chr2L_9860001 RAL-109_125b 565 chr2L 9871477 9871518 chr2L 9871611 9871652 8 133 17.0 12.5 14.8 0.5 175 chr2L 9871477 intron nAChRalpha6 - chr2L 9871564 intron nAChRalpha6 - chr2L 9871652 intron nAChRalpha6 - chr2L_8_9870001 chr2L_9870001 RAL-109_125b 566 chr2L 9883118 9883172 chr2L 9883264 9883317 10 145 19.0 19.5 19.2 0.5 199 chr2L 9883118 intron nAChRalpha6 - chr2L 9883218 intron nAChRalpha6 - chr2L 9883317 intron nAChRalpha6 - chr2L_10_9880001 chr2L_9880001 RAL-109_125b 567 chr2L 9892464 9892528 chr2L 9892590 9892654 11 125 8.0 8.0 8.0 1.2 190 chr2L 9892464 intron mtDNA-helicase - chr2L 9892559 intron mtDNA-helicase - chr2L 9892654 exon mtDNA-helicase - chr2L_11_9890001 chr2L_9890001 RAL-109_125b 568 chr2L 9960639 9960694 chr2L 9960846 9960901 9 204 16.5 15.5 16.0 0.5 262 chr2L 9960639 3` UTR CG5850 - chr2L 9960770 3` UTR CG5850 - chr2L 9960901 3` UTR CG5850 - chr2L_9_9960001 chr2L_9960001 RAL-109_125b 569 chr2L 9973705 9973754 chr2L 9980858 9980923 HMS-Beagle 16 7159 8.0 13.0 10.5 1.4 7218 chr2L 9973705 intergenic not near genes chr2L 9977314 intergenic not near genes chr2L 9980923 intergenic not near genes chr2L_16_9975001 chr2L_9975001 RAL-109_125b 570 chr2L 9982208 9982229 chr2L 9982362 9982383 8 153 18.0 28.0 23.0 0.3 175 chr2L 9982208 intergenic not near genes chr2L 9982296 intergenic not near genes chr2L 9982383 intergenic not near genes chr2L_8_9980001 chr2L_9980001 RAL-109_125b 571 chr2L 9986314 9986379 chr2L 9986459 9986485 6 134 14.0 22.0 18.0 0.3 171 chr2L 9986314 intron bib + chr2L 9986400 intron bib + chr2L 9986485 intron bib + chr2L_6_9985001 chr2L_9985001 RAL-109_125b 572 chr2L 10048277 10048301 chr2L 10048403 10048427 4 126 3.5 7.0 5.2 0.6 150 chr2L 10048277 intergenic not near genes chr2L 10048352 intergenic not near genes chr2L 10048427 intergenic not near genes chr2L_4_10045001 chr2L_10045001 RAL-109_125b 573 chr2L 10087429 10087481 chr2L 10087554 10087597 10 121 16.0 14.5 15.2 0.6 168 chr2L 10087429 intron CG44153 - chr2L 10087513 intron CG44153 - chr2L 10087597 intron CG44153 - chr2L_10_10085001 chr2L_10085001 RAL-109_125b 574 chr2L 10105269 10105300 chr2L 10105395 10105426 5 124 15.0 21.0 18.0 0.3 157 chr2L 10105269 intron,intron CG44153 -,CG34109 + chr2L 10105348 intron,intron CG44153 -,CG34109 + chr2L 10105426 intron,intron CG44153 -,CG34109 + chr2L_5_10105001 chr2L_10105001 RAL-109_125b 575 chr2L 10114944 10115003 chr2L 10115078 10115137 12 133 7.0 9.5 8.2 1.3 193 chr2L 10114944 intron,intron CG44153 -,CG34109 + chr2L 10115040 intron,intron CG44153 -,CG34109 + chr2L 10115137 intron,intron CG44153 -,CG34109 + chr2L_12_10115001 chr2L_10115001 RAL-109_125b 576 chr2L 10129167 10129189 chr2L 10129286 10129293 7 130 6.5 13.0 9.8 0.6 126 chr2L 10129167 intron CG44153 - chr2L 10129230 intron CG44153 - chr2L 10129293 intron CG44153 - chr2L_7_10125001 chr2L_10125001 RAL-109_125b 577 chr2L 10131323 10131373 chr2L 10131478 10131528 17 153 16.0 14.0 15.0 1.1 205 chr2L 10131323 intron CG44153 - chr2L 10131426 intron CG44153 - chr2L 10131528 intron CG44153 - chr2L_17_10130001 chr2L_10130001 RAL-109_125b 578 chr2L 10133022 10133069 chr2L 10133138 10133185 12 115 14.0 20.0 17.0 0.7 163 chr2L 10133022 intron CG44153 - chr2L 10133104 intron CG44153 - chr2L 10133185 intron CG44153 - chr2L_12_10130001 chr2L_10130001 RAL-109_125b 579 chr2L 10135479 10135527 chr2L 10135643 10135674 16 163 6.5 7.0 6.8 2.1 195 chr2L 10135479 intron CG44153 - chr2L 10135576 intron CG44153 - chr2L 10135674 intron CG44153 - chr2L_16_10135001 chr2L_10135001 RAL-109_125b 580 chr2L 10138145 10138171 chr2L 10143440 10143465 Rt1c 4 5295 11.5 11.5 11.5 0.3 5320 chr2L 10138145 intron CG44153 - chr2L 10140805 intron CG44153 - chr2L 10143465 intron CG44153 - chr2L_4_10140001 chr2L_10140001 RAL-109_125b 581 chr2L 10138172 10138193 chr2L 10143438 10143484 Rt1c 5 5285 8.0 11.0 9.5 0.5 5312 chr2L 10138172 intron CG44153 - chr2L 10140828 intron CG44153 - chr2L 10143484 intron CG44153 - chr2L_5_10140001 chr2L_10140001 RAL-109_125b 582 chr2L 10156294 10156340 chr2L 10163798 10163849 blood 16 7514 7.0 5.0 6.0 2.3 7555 chr2L 10156294 intron,3` UTR CG44153 -,CG4839 + chr2L 10160072 intron CG44153 - chr2L 10163849 intron CG44153 - chr2L_16_10160001 chr2L_10160001 RAL-109_125b 583 chr2L 10164485 10164513 chr2L 10164613 10164629 6 126 13.5 7.5 10.5 0.5 144 chr2L 10164485 intron CG44153 - chr2L 10164557 intron CG44153 - chr2L 10164629 intron CG44153 - chr2L_6_10160001 chr2L_10160001 RAL-109_125b 584 chr2L 10169283 10169315 chr2L 10169595 10169597 8 308 16.0 18.5 17.2 0.4 314 chr2L 10169283 intron CG44153 - chr2L 10169440 intron CG44153 - chr2L 10169597 intron CG44153 - chr2L_8_10165001 chr2L_10165001 RAL-109_125b 585 chr2L 10177333 10177393 chr2L 10177459 10177523 6 129 11.5 8.5 10.0 0.5 190 chr2L 10177333 intron CG44153 - chr2L 10177428 intron CG44153 - chr2L 10177523 intron CG44153 - chr2L_6_10175001 chr2L_10175001 RAL-109_125b 586 chr2L 10180571 10180606 chr2L 10180699 10180732 5 132 20.0 26.0 23.0 0.2 161 chr2L 10180571 intergenic CG44153 - chr2L 10180652 intergenic CG44153 - chr2L 10180732 intergenic CG44153 - chr2L_5_10180001 chr2L_10180001 RAL-109_125b 587 chr2L 10204478 10204528 chr2L 10204611 10204644 7 130 17.0 21.5 19.2 0.3 166 chr2L 10204478 intergenic CG34159 -,CG5734 - chr2L 10204561 intergenic CG5734 -,CG34159 - chr2L 10204644 intergenic CG5734 -,CG34159 - chr2L_7_10200001 chr2L_10200001 RAL-109_125b 588 chr2L 10209798 10209854 chr2L 10209925 10209926 16 121 5.5 1.5 3.5 3.6 128 chr2L 10209798 intergenic CR44845 +,CG5731 -,CG5727 - chr2L 10209862 3` UTR CG5727 - chr2L 10209926 3` UTR CG5727 - chr2L_16_10205001 chr2L_10205001 RAL-109_125b 589 chr2L 10232870 10232940 chr2L 10232997 10233068 17 128 21.0 19.0 20.0 0.8 198 chr2L 10232870 intron eEF1delta + chr2L 10232969 intron eEF1delta + chr2L 10233068 intron eEF1delta + chr2L_17_10230001 chr2L_10230001 RAL-109_125b 590 chr2L 10276078 10276226 chr2L 10276264 10276354 29 156 3.5 6.5 5.0 4.8 276 chr2L 10276078 exon Utx - chr2L 10276216 intron Utx - chr2L 10276354 intron Utx - chr2L_29_10275001 chr2L_10275001 RAL-109_125b 591 chr2L 10277976 10278041 chr2L 10278106 10278171 13 129 20.5 21.0 20.8 0.6 195 chr2L 10277976 intron Utx - chr2L 10278074 intron Utx - chr2L 10278171 intron Utx - chr2L_13_10275001 chr2L_10275001 RAL-109_125b 592 chr2L 10294120 10294184 chr2L 10294241 10294314 7 128 12.5 7.5 10.0 0.6 194 chr2L 10294120 intron Hand - chr2L 10294217 intron Hand - chr2L 10294314 intron Hand - chr2L_7_10290001 chr2L_10290001 RAL-109_125b 593 chr2L 10294632 10294682 chr2L 10294768 10294807 11 134 20.5 21.5 21.0 0.5 175 chr2L 10294632 intron Hand - chr2L 10294720 intron Hand - chr2L 10294807 intron Hand - chr2L_11_10290001 chr2L_10290001 RAL-109_125b 594 chr2L 10298020 10298070 chr2L 10298147 10298200 6 126 13.0 13.5 13.2 0.4 180 chr2L 10298020 intron,5` UTR CYLD -,CR44968 + chr2L 10298110 intron,5` UTR CYLD -,CR44968 + chr2L 10298200 intron,5` UTR CYLD -,CR44968 + chr2L_6_10295001 chr2L_10295001 RAL-109_125b 595 chr2L 10314462 10314524 chr2L 10314621 10314683 6 159 16.5 17.5 17.0 0.3 221 chr2L 10314462 intergenic CG5384 -,CG4972 + chr2L 10314572 intergenic CG5384 -,CG4972 + chr2L 10314683 intergenic CG4972 +,CG5384 - chr2L_6_10310001 chr2L_10310001 RAL-109_125b 596 chr2L 10348339 10348400 chr2L 10348467 10348533 9 131 22.5 15.5 19.0 0.5 194 chr2L 10348339 intron CG34367 - chr2L 10348436 intron CG34367 - chr2L 10348533 intron CG34367 - chr2L_9_10345001 chr2L_10345001 RAL-109_125b 597 chr2L 10458184 10458210 chr2L 10458330 10458355 8 146 0.0 5.0 2.5 2.3 171 chr2L 10458184 intron LM408 + chr2L 10458270 intron LM408 + chr2L 10458355 intron LM408 + chr2L_8_10455001 chr2L_10455001 RAL-109_125b 598 chr2L 10474341 10474410 chr2L 10474472 10474541 12 128 3.5 3.0 3.2 2.9 200 chr2L 10474341 5` UTR RluA-1 - chr2L 10474441 intergenic RluA-1 - chr2L 10474541 intergenic RluA-1 - chr2L_12_10470001 chr2L_10470001 RAL-109_125b 599 chr2L 10490231 10490244 chr2L 10490362 10490376 4 132 31.5 22.5 27.0 0.1 145 chr2L 10490231 3` UTR,3` UTR CG6144 +,CG13144 - chr2L 10490304 3` UTR,3` UTR CG6144 +,CG13144 - chr2L 10490376 3` UTR,3` UTR CG6144 +,CG13144 - chr2L_4_10490001 chr2L_10490001 RAL-109_125b 600 chr2L 10490248 10490295 chr2L 10490357 10490427 20 126 24.5 23.0 23.8 0.8 179 chr2L 10490248 3` UTR,3` UTR CG6144 +,CG13144 - chr2L 10490338 3` UTR,3` UTR CG6144 +,CG13144 - chr2L 10490427 3` UTR,3` UTR CG6144 +,CG13144 - chr2L_20_10490001 chr2L_10490001 RAL-109_125b 601 chr2L 10495298 10495315 chr2L 10495424 10495441 5 127 11.5 17.0 14.2 0.3 143 chr2L 10495298 intron Myo31DF - chr2L 10495370 intron Myo31DF - chr2L 10495441 intron Myo31DF - chr2L_5_10495001 chr2L_10495001 RAL-109_125b 602 chr2L 10515328 10515382 chr2L 10515458 10515525 12 141 21.5 21.0 21.2 0.5 197 chr2L 10515328 intron,intron CG45083 -,Fatp - chr2L 10515426 intron,intron CG45083 -,Fatp - chr2L 10515525 intron,intron CG45083 -,Fatp - chr2L_12_10515001 chr2L_10515001 RAL-109_125b 603 chr2L 10531564 10531645 chr2L 10531706 10531787 12 142 11.0 13.5 12.2 0.9 223 chr2L 10531564 3` UTR Lip4 + chr2L 10531676 3` UTR Lip4 + chr2L 10531787 intergenic Lip4 +,CG18301 + chr2L_12_10530001 chr2L_10530001 RAL-109_125b 604 chr2L 10540827 10540878 chr2L 10540955 10541006 12 123 4.5 11.0 7.8 1.4 179 chr2L 10540827 intergenic not near genes chr2L 10540916 intergenic not near genes chr2L 10541006 intergenic not near genes chr2L_12_10540001 chr2L_10540001 RAL-109_125b 605 chr2L 10558047 10558083 chr2L 10558612 10558625 4 559 20.5 5.5 13.0 0.3 578 chr2L 10558047 intron Trim9 + chr2L 10558336 intron Trim9 + chr2L 10558625 intron Trim9 + chr2L_4_10555001 chr2L_10555001 RAL-109_125b 606 chr2L 10563871 10563936 chr2L 10564010 10564079 14 142 4.5 6.0 5.2 2.3 208 chr2L 10563871 intron Trim9 + chr2L 10563975 intron Trim9 + chr2L 10564079 intron Trim9 + chr2L_14_10560001 chr2L_10560001 RAL-109_125b 607 chr2L 10572659 10572712 chr2L 10572790 10572843 11 130 9.5 9.0 9.2 1.1 184 chr2L 10572659 intron Trim9 + chr2L 10572751 intron Trim9 + chr2L 10572843 intron Trim9 + chr2L_11_10570001 chr2L_10570001 RAL-109_125b 608 chr2L 10572715 10572731 chr2L 10572786 10572830 13 117 7.5 8.5 8.0 1.4 115 chr2L 10572715 intron Trim9 + chr2L 10572772 intron Trim9 + chr2L 10572830 intron Trim9 + chr2L_13_10570001 chr2L_10570001 RAL-109_125b 609 chr2L 10580748 10580820 chr2L 10580879 10580951 17 128 18.0 23.0 20.5 0.8 203 chr2L 10580748 intron Trim9 + chr2L 10580850 intron Trim9 + chr2L 10580951 intron Trim9 + chr2L_17_10580001 chr2L_10580001 RAL-109_125b 610 chr2L 10589025 10589081 chr2L 10589151 10589207 5 126 15.0 17.5 16.2 0.3 182 chr2L 10589025 intron Trim9 + chr2L 10589116 intron Trim9 + chr2L 10589207 intron Trim9 + chr2L_5_10585001 chr2L_10585001 RAL-109_125b 611 chr2L 10592792 10592868 chr2L 10600503 10600574 opus 17 7710 3.0 3.5 3.2 4.0 7782 chr2L 10592792 intron Trim9 + chr2L 10596683 intron Trim9 + chr2L 10600574 intron Trim9 + chr2L_17_10595001 chr2L_10595001 RAL-109_125b 612 chr2L 10604179 10604207 chr2L 10604305 10604339 7 131 20.5 17.5 19.0 0.3 160 chr2L 10604179 intron Trim9 + chr2L 10604259 intron Trim9 + chr2L 10604339 intron Trim9 + chr2L_7_10600001 chr2L_10600001 RAL-109_125b 613 chr2L 10631165 10631216 chr2L 10631347 10631404 9 179 22.5 10.0 16.2 0.5 239 chr2L 10631165 intron CG7329 - chr2L 10631284 intron CG7329 - chr2L 10631404 intron CG7329 - chr2L_9_10630001 chr2L_10630001 RAL-109_125b 614 chr2L 10633303 10633379 chr2L 10633440 10633500 9 117 18.5 20.5 19.5 0.4 197 chr2L 10633303 intron CG7329 - chr2L 10633402 intron CG7329 - chr2L 10633500 intron CG7329 - chr2L_9_10630001 chr2L_10630001 RAL-109_125b 615 chr2L 10634725 10634788 chr2L 10634855 10634917 9 130 10.5 9.5 10.0 0.8 192 chr2L 10634725 intron CG7329 - chr2L 10634821 intron CG7329 - chr2L 10634917 intron CG7329 - chr2L_9_10630001 chr2L_10630001 RAL-109_125b 616 chr2L 10640594 10640619 chr2L 10640733 10640757 7 138 26.5 25.0 25.8 0.3 163 chr2L 10640594 exon CG31872 + chr2L 10640676 exon CG31872 + chr2L 10640757 exon CG31872 + chr2L_7_10640001 chr2L_10640001 RAL-109_125b 617 chr2L 10640620 10640661 chr2L 10640729 10640800 10 128 23.5 23.0 23.2 0.4 180 chr2L 10640620 exon CG31872 + chr2L 10640710 exon CG31872 + chr2L 10640800 exon CG31872 + chr2L_10_10640001 chr2L_10640001 RAL-109_125b 618 chr2L 10723491 10723553 chr2L 10723635 10723697 21 144 3.5 3.0 3.2 5.0 206 chr2L 10723491 intergenic not near genes chr2L 10723594 intergenic not near genes chr2L 10723697 intergenic not near genes chr2L_21_10720001 chr2L_10720001 RAL-109_125b 619 chr2L 10793266 10793334 chr2L 10793393 10793461 11 126 16.5 15.0 15.8 0.7 195 chr2L 10793266 intron CG31869 - chr2L 10793364 intron CG31869 - chr2L 10793461 intron CG31869 - chr2L_11_10790001 chr2L_10790001 RAL-109_125b 620 chr2L 10793724 10793774 chr2L 10793875 10793920 10 149 23.0 24.5 23.8 0.4 196 chr2L 10793724 intron CG31869 - chr2L 10793822 intron CG31869 - chr2L 10793920 intron CG31869 - chr2L_10_10790001 chr2L_10790001 RAL-109_125b 621 chr2L 10817264 10817279 chr2L 10817364 10817395 4 109 20.5 19.5 20.0 0.2 131 chr2L 10817264 intron Nos - chr2L 10817330 intron Nos - chr2L 10817395 intron Nos - chr2L_4_10815001 chr2L_10815001 RAL-109_125b 622 chr2L 10836762 10836781 chr2L 10836890 10836909 4 128 17.0 27.0 22.0 0.2 147 chr2L 10836762 intron Nos - chr2L 10836836 intron Nos - chr2L 10836909 intron Nos - chr2L_4_10835001 chr2L_10835001 RAL-109_125b 623 chr2L 10850952 10850985 chr2L 10851084 10851117 8 132 17.5 21.0 19.2 0.4 165 chr2L 10850952 intron CG43129 + chr2L 10851034 intron CG43129 + chr2L 10851117 intron CG43129 + chr2L_8_10850001 chr2L_10850001 RAL-109_125b 624 chr2L 10852125 10852174 chr2L 10852264 10852313 11 139 18.0 20.0 19.0 0.6 188 chr2L 10852125 intron CG43129 + chr2L 10852219 intron CG43129 + chr2L 10852313 intron CG43129 + chr2L_11_10850001 chr2L_10850001 RAL-109_125b 625 chr2L 10862807 10862857 chr2L 10864466 10864503 Rt1c 10 1646 13.0 14.5 13.8 0.7 1696 chr2L 10862807 3` UTR CR43807 - chr2L 10863655 intron CR43807 - chr2L 10864503 3` UTR CR43807 - chr2L_10_10860001 chr2L_10860001 RAL-109_125b 626 chr2L 10873389 10873405 chr2L 10873609 10873625 7 220 19.0 4.0 11.5 0.6 236 chr2L 10873389 intergenic not near genes chr2L 10873507 intergenic not near genes chr2L 10873625 intergenic not near genes chr2L_7_10870001 chr2L_10870001 RAL-109_125b 627 chr2L 10876534 10876566 chr2L 10883640 10883672 297 6 7105 7.0 5.0 6.0 0.9 7138 chr2L 10876534 intergenic not near genes chr2L 10880103 intergenic not near genes chr2L 10883672 intergenic not near genes chr2L_6_10880001 chr2L_10880001 RAL-109_125b 628 chr2L 10891438 10891453 chr2L 10891602 10891617 7 163 17.0 10.0 13.5 0.5 179 chr2L 10891438 intergenic not near genes chr2L 10891528 intergenic not near genes chr2L 10891617 intergenic not near genes chr2L_7_10890001 chr2L_10890001 RAL-109_125b 629 chr2L 10891461 10891513 chr2L 10891597 10891677 7 158 5.5 8.5 7.0 0.9 216 chr2L 10891461 intergenic not near genes chr2L 10891569 intergenic not near genes chr2L 10891677 intergenic not near genes chr2L_7_10890001 chr2L_10890001 RAL-109_125b 630 chr2L 10933824 10933841 chr2L 10933952 10933969 9 127 15.5 13.5 14.5 0.6 145 chr2L 10933824 intron dpr2 - chr2L 10933896 intron dpr2 - chr2L 10933969 intron dpr2 - chr2L_9_10930001 chr2L_10930001 RAL-109_125b 631 chr2L 10945040 10945103 chr2L 10945167 10945229 13 121 14.0 16.0 15.0 0.8 189 chr2L 10945040 intron dpr2 - chr2L 10945134 intron dpr2 - chr2L 10945229 intron dpr2 - chr2L_13_10945001 chr2L_10945001 RAL-109_125b 632 chr2L 10946908 10946956 chr2L 10956173 10956192 roo 14 9260 13.0 10.5 11.8 1.1 9284 chr2L 10946908 intron dpr2 - chr2L 10951550 intron dpr2 - chr2L 10956192 intron dpr2 - chr2L_14_10950001 chr2L_10950001 RAL-109_125b 633 chr2L 10946957 10946970 chr2L 10956158 10956230 roo 9 9251 10.0 8.0 9.0 0.9 9273 chr2L 10946957 intron dpr2 - chr2L 10951594 intron dpr2 - chr2L 10956230 intron dpr2 - chr2L_9_10950001 chr2L_10950001 RAL-109_125b 634 chr2L 11174606 11174659 chr2L 11174715 11174775 9 110 3.5 3.5 3.5 2.0 169 chr2L 11174606 intron Ca-beta - chr2L 11174690 intron Ca-beta - chr2L 11174775 intron Ca-beta - chr2L_9_11170001 chr2L_11170001 RAL-109_125b 635 chr2L 11193526 11193591 chr2L 11193659 11193730 11 135 22.0 23.5 22.8 0.5 204 chr2L 11193526 intron Ca-beta - chr2L 11193628 intron Ca-beta - chr2L 11193730 intron Ca-beta - chr2L_11_11190001 chr2L_11190001 RAL-109_125b 636 chr2L 11292331 11292406 chr2L 11292463 11292525 7 129 21.0 22.0 21.5 0.3 194 chr2L 11292331 intergenic not near genes chr2L 11292428 intergenic not near genes chr2L 11292525 intergenic not near genes chr2L_7_11290001 chr2L_11290001 RAL-109_125b 637 chr2L 11293673 11293739 chr2L 11293860 11293926 7 187 18.5 19.0 18.8 0.4 253 chr2L 11293673 intergenic not near genes chr2L 11293800 intergenic not near genes chr2L 11293926 intergenic not near genes chr2L_7_11290001 chr2L_11290001 RAL-109_125b 638 chr2L 11298782 11298838 chr2L 11298909 11298965 7 127 12.0 15.5 13.8 0.5 183 chr2L 11298782 intergenic not near genes chr2L 11298874 intergenic not near genes chr2L 11298965 intergenic not near genes chr2L_7_11295001 chr2L_11295001 RAL-109_125b 639 chr2L 11313078 11313137 chr2L 11313196 11313266 9 123 18.0 20.5 19.2 0.4 188 chr2L 11313078 intergenic not near genes chr2L 11313172 intergenic not near genes chr2L 11313266 intergenic not near genes chr2L_9_11310001 chr2L_11310001 RAL-109_125b 640 chr2L 11315219 11315272 chr2L 11317672 11317715 G2 24 2451 8.5 7.0 7.8 2.7 2496 chr2L 11315219 intergenic not near genes chr2L 11316467 intergenic not near genes chr2L 11317715 intergenic not near genes chr2L_24_11315001 chr2L_11315001 RAL-109_125b 641 chr2L 11356357 11356416 chr2L 11356518 11356577 10 159 22.5 21.5 22.0 0.4 220 chr2L 11356357 intergenic not near genes chr2L 11356467 intergenic not near genes chr2L 11356577 intergenic not near genes chr2L_10_11355001 chr2L_11355001 RAL-109_125b 642 chr2L 11379904 11379953 chr2L 11380036 11380085 4 132 12.5 0.0 6.2 0.6 181 chr2L 11379904 intergenic not near genes chr2L 11379994 intergenic not near genes chr2L 11380085 intergenic not near genes chr2L_4_11375001 chr2L_11375001 RAL-109_125b 643 chr2L 11380587 11380603 chr2L 11380694 11380719 5 119 14.0 13.0 13.5 0.3 132 chr2L 11380587 intergenic not near genes chr2L 11380653 intergenic not near genes chr2L 11380719 intergenic not near genes chr2L_5_11380001 chr2L_11380001 RAL-109_125b 644 chr2L 11380605 11380643 chr2L 11380687 11380734 6 112 14.0 13.5 13.8 0.4 129 chr2L 11380605 intergenic not near genes chr2L 11380670 intergenic not near genes chr2L 11380734 intergenic not near genes chr2L_6_11380001 chr2L_11380001 RAL-109_125b 645 chr2L 11404740 11404795 chr2L 11404866 11404921 7 123 8.5 10.5 9.5 0.7 181 chr2L 11404740 intergenic not near genes chr2L 11404830 intergenic not near genes chr2L 11404921 intergenic not near genes chr2L_7_11400001 chr2L_11400001 RAL-109_125b 646 chr2L 11449982 11450041 chr2L 11450182 11450241 7 200 32.0 35.0 33.5 0.2 259 chr2L 11449982 intergenic not near genes chr2L 11450112 intergenic not near genes chr2L 11450241 intergenic not near genes chr2L_7_11450001 chr2L_11450001 RAL-109_125b 647 chr2L 11453076 11453143 chr2L 11453239 11453288 9 156 14.0 17.5 15.8 0.5 212 chr2L 11453076 intergenic not near genes chr2L 11453182 intergenic not near genes chr2L 11453288 intergenic not near genes chr2L_9_11450001 chr2L_11450001 RAL-109_125b 648 chr2L 11469474 11469509 chr2L 11469606 11469641 5 132 25.0 22.5 23.8 0.2 167 chr2L 11469474 intergenic not near genes chr2L 11469558 intergenic not near genes chr2L 11469641 intergenic not near genes chr2L_5_11465001 chr2L_11465001 RAL-109_125b 649 chr2L 11485656 11485711 chr2L 11485782 11485837 4 126 19.5 16.0 17.8 0.2 181 chr2L 11485656 exon,5` UTR CG43355 +,sala + chr2L 11485746 3` UTR,5` UTR CG43355 +,sala + chr2L 11485837 intron,intron CG43355 +,sala + chr2L_4_11485001 chr2L_11485001 RAL-109_125b 650 chr2L 11492975 11492991 chr2L 11493155 11493181 6 188 0.0 1.0 0.5 4.0 206 chr2L 11492975 intergenic not near genes chr2L 11493078 intergenic not near genes chr2L 11493181 intergenic not near genes chr2L_6_11490001 chr2L_11490001 RAL-109_125b 651 chr2L 11493550 11493588 chr2L 11493693 11493719 9 142 7.0 14.0 10.5 0.8 169 chr2L 11493550 intergenic not near genes chr2L 11493634 intergenic not near genes chr2L 11493719 intergenic not near genes chr2L_9_11490001 chr2L_11490001 RAL-109_125b 652 chr2L 11496584 11496654 chr2L 11496712 11496782 13 128 8.5 6.0 7.2 1.6 198 chr2L 11496584 intergenic CG6488 - chr2L 11496683 intergenic CG6488 - chr2L 11496782 intergenic CG6488 - chr2L_13_11495001 chr2L_11495001 RAL-109_125b 653 chr2L 11537148 11537189 chr2L 11537268 11537320 11 124 7.5 7.0 7.2 1.3 172 chr2L 11537148 intergenic CG43438 + chr2L 11537234 intergenic CG43438 + chr2L 11537320 intergenic CG43438 + chr2L_11_11535001 chr2L_11535001 RAL-109_125b 654 chr2L 11540538 11540603 chr2L 11547990 11548055 Tabor 17 7453 8.5 6.5 7.5 2.0 7517 chr2L 11540538 intergenic not near genes chr2L 11544296 intergenic not near genes chr2L 11548055 intergenic not near genes chr2L_17_11540001 chr2L_11540001 RAL-109_125b 655 chr2L 11555384 11555417 chr2L 11555553 11555586 7 169 14.5 7.0 10.8 0.6 202 chr2L 11555384 intergenic not near genes chr2L 11555485 intergenic not near genes chr2L 11555586 intergenic not near genes chr2L_7_11555001 chr2L_11555001 RAL-109_125b 656 chr2L 11563598 11563617 chr2L 11568852 11568870 copia 7 5254 13.0 2.5 7.8 0.8 5272 chr2L 11563598 intergenic not near genes chr2L 11566234 intergenic not near genes chr2L 11568870 intergenic not near genes chr2L_7_11565001 chr2L_11565001 RAL-109_125b 657 chr2L 11563624 11563670 chr2L 11568848 11568919 copia 6 5247 3.5 2.5 3.0 1.5 5295 chr2L 11563624 intergenic not near genes chr2L 11566272 intergenic not near genes chr2L 11568919 intergenic not near genes chr2L_6_11565001 chr2L_11565001 RAL-109_125b 658 chr2L 11614010 11614034 chr2L 11615555 11615579 hopper2 5 1543 21.0 8.0 14.5 0.3 1569 chr2L 11614010 intron kek2 + chr2L 11614794 intron kek2 + chr2L 11615579 intron kek2 + chr2L_5_11610001 chr2L_11610001 RAL-109_125b 659 chr2L 11614042 11614085 chr2L 11615549 11615610 hopper2 11 1528 8.5 6.5 7.5 1.3 1568 chr2L 11614042 intron kek2 + chr2L 11614826 intron kek2 + chr2L 11615610 intron kek2 + chr2L_11_11610001 chr2L_11610001 RAL-109_125b 660 chr2L 11618501 11618575 chr2L 11618642 11618716 12 140 19.0 23.0 21.0 0.5 215 chr2L 11618501 intron kek2 + chr2L 11618608 intron kek2 + chr2L 11618716 intron kek2 + chr2L_12_11615001 chr2L_11615001 RAL-109_125b 661 chr2L 11633118 11633197 chr2L 11633270 11633309 12 147 14.5 15.5 15.0 0.8 191 chr2L 11633118 intergenic not near genes chr2L 11633214 intergenic not near genes chr2L 11633309 intergenic not near genes chr2L_12_11630001 chr2L_11630001 RAL-109_125b 662 chr2L 11654363 11654436 chr2L 11654560 11654612 10 193 15.0 17.5 16.2 0.6 249 chr2L 11654363 intergenic CG4983 + chr2L 11654488 intergenic CG4983 + chr2L 11654612 intergenic CG4983 + chr2L_10_11650001 chr2L_11650001 RAL-109_125b 663 chr2L 11674645 11674711 chr2L 11675048 11675106 13 401 17.0 12.0 14.5 0.8 461 chr2L 11674645 intergenic not near genes chr2L 11674876 intergenic not near genes chr2L 11675106 intergenic not near genes chr2L_13_11670001 chr2L_11670001 RAL-109_125b 664 chr2L 11676180 11676237 chr2L 11676503 11676539 8 316 9.5 2.5 6.0 1.1 359 chr2L 11676180 intergenic not near genes chr2L 11676360 intergenic not near genes chr2L 11676539 intergenic not near genes chr2L_8_11675001 chr2L_11675001 RAL-109_125b 665 chr2L 11708068 11708102 chr2L 11708489 11708503 6 418 14.5 12.0 13.2 0.4 435 chr2L 11708068 intergenic not near genes chr2L 11708286 intergenic not near genes chr2L 11708503 intergenic not near genes chr2L_6_11705001 chr2L_11705001 RAL-109_125b 666 chr2L 11713483 11713540 chr2L 11720976 11721031 blood 21 7510 5.0 4.5 4.8 3.6 7548 chr2L 11713483 intergenic not near genes chr2L 11717257 intergenic not near genes chr2L 11721031 intergenic CR44143 + chr2L_21_11715001 chr2L_11715001 RAL-109_125b 667 chr2L 11726783 11726827 chr2L 11726889 11726906 11 103 14.0 14.0 14.0 0.7 123 chr2L 11726783 intergenic not near genes chr2L 11726844 intergenic not near genes chr2L 11726906 intergenic not near genes chr2L_11_11725001 chr2L_11725001 RAL-109_125b 668 chr2L 11743702 11743765 chr2L 11743829 11743880 17 124 27.0 24.5 25.8 0.6 178 chr2L 11743702 exon Vha100-5 + chr2L 11743791 intron,3` UTR Vha100-5 +,CR44144 - chr2L 11743880 exon,3` UTR Vha100-5 +,CR44144 - chr2L_17_11740001 chr2L_11740001 RAL-109_125b 669 chr2L 11750279 11750285 chr2L 11750615 11750621 4 336 18.0 7.5 12.8 0.3 342 chr2L 11750279 intergenic not near genes chr2L 11750450 intergenic not near genes chr2L 11750621 intergenic not near genes chr2L_4_11750001 chr2L_11750001 RAL-109_125b 670 chr2L 11750286 11750341 chr2L 11750612 11750677 10 334 19.5 8.0 13.8 0.7 391 chr2L 11750286 intergenic not near genes chr2L 11750482 intergenic not near genes chr2L 11750677 intergenic not near genes chr2L_10_11750001 chr2L_11750001 RAL-109_125b 671 chr2L 11752817 11752891 chr2L 11753157 11753231 14 337 22.5 14.5 18.5 0.7 414 chr2L 11752817 intergenic CG42470 - chr2L 11753024 3` UTR CG42470 - chr2L 11753231 exon CG42470 - chr2L_14_11750001 chr2L_11750001 RAL-109_125b 672 chr2L 11781038 11781192 chr2L 11781172 11781318 9 130 8.5 10.0 9.2 0.9 280 chr2L 11781038 intergenic not near genes chr2L 11781178 intergenic not near genes chr2L 11781318 intergenic not near genes chr2L_9_11780001 chr2L_11780001 RAL-109_125b 673 chr2L 11841298 11841368 chr2L 11841445 11841525 19 153 4.5 0.0 2.2 5.9 227 chr2L 11841298 intron Pde1c - chr2L 11841412 intron Pde1c - chr2L 11841525 intron Pde1c - chr2L_19_11840001 chr2L_11840001 RAL-109_125b 674 chr2L 11862313 11862389 chr2L 11862456 11862532 27 141 4.5 6.5 5.5 4.2 219 chr2L 11862313 intron Pde1c - chr2L 11862422 intron Pde1c - chr2L 11862532 intron Pde1c - chr2L_27_11860001 chr2L_11860001 RAL-109_125b 675 chr2L 11866958 11867004 chr2L 11867120 11867166 8 161 7.0 6.5 6.8 1.0 208 chr2L 11866958 intron Pde1c - chr2L 11867062 intron Pde1c - chr2L 11867166 intron Pde1c - chr2L_8_11865001 chr2L_11865001 RAL-109_125b 676 chr2L 11870941 11870976 chr2L 11871069 11871104 10 128 17.0 16.5 16.8 0.6 163 chr2L 11870941 intron Pde1c - chr2L 11871022 intron Pde1c - chr2L 11871104 intron Pde1c - chr2L_10_11870001 chr2L_11870001 RAL-109_125b 677 chr2L 11886403 11886449 chr2L 11886552 11886593 4 146 19.5 15.0 17.2 0.2 190 chr2L 11886403 intron Pde1c - chr2L 11886498 intron Pde1c - chr2L 11886593 intron Pde1c - chr2L_4_11885001 chr2L_11885001 RAL-109_125b 678 chr2L 11889385 11889436 chr2L 11889778 11889829 9 392 18.5 19.5 19.0 0.5 444 chr2L 11889385 intron Pde1c - chr2L 11889607 intron Pde1c - chr2L 11889829 intron Pde1c - chr2L_9_11885001 chr2L_11885001 RAL-109_125b 679 chr2L 11892505 11892560 chr2L 11892644 11892699 10 139 7.0 4.5 5.8 1.5 194 chr2L 11892505 intron Pde1c - chr2L 11892602 intron Pde1c - chr2L 11892699 intron Pde1c - chr2L_10_11890001 chr2L_11890001 RAL-109_125b 680 chr2L 11904625 11904696 chr2L 11904793 11904864 4 168 21.5 17.5 19.5 0.2 239 chr2L 11904625 intron Pde1c - chr2L 11904744 intron Pde1c - chr2L 11904864 intron Pde1c - chr2L_4_11900001 chr2L_11900001 RAL-109_125b 681 chr2L 11906760 11906797 chr2L 11906892 11906929 4 132 19.0 6.0 12.5 0.3 169 chr2L 11906760 intron Pde1c - chr2L 11906844 intron Pde1c - chr2L 11906929 intron Pde1c - chr2L_4_11905001 chr2L_11905001 RAL-109_125b 682 chr2L 11941683 11941736 chr2L 11941849 11941902 19 169 8.0 2.5 5.2 3.1 219 chr2L 11941683 intergenic not near genes chr2L 11941792 intergenic not near genes chr2L 11941902 intergenic not near genes chr2L_19_11940001 chr2L_11940001 RAL-109_125b 683 chr2L 11947331 11947395 chr2L 11947458 11947522 11 126 23.5 22.0 22.8 0.5 191 chr2L 11947331 intergenic Cry + chr2L 11947426 intergenic Cry + chr2L 11947522 intergenic Cry +,CG16964 + chr2L_11_11945001 chr2L_11945001 RAL-109_125b 684 chr2L 11951292 11951360 chr2L 11951439 11951507 11 145 10.0 11.0 10.5 1.0 215 chr2L 11951292 intergenic not near genes chr2L 11951400 intergenic not near genes chr2L 11951507 intergenic not near genes chr2L_11_11950001 chr2L_11950001 RAL-109_125b 685 chr2L 11951920 11951996 chr2L 11952058 11952134 25 136 2.0 5.5 3.8 5.2 214 chr2L 11951920 intergenic CR43314 - chr2L 11952027 intergenic CR43314 - chr2L 11952134 intergenic CR43314 - chr2L_25_11950001 chr2L_11950001 RAL-109_125b 686 chr2L 11976051 11976091 chr2L 11976178 11976218 10 127 30.5 22.5 26.5 0.4 167 chr2L 11976051 intergenic not near genes chr2L 11976134 intergenic not near genes chr2L 11976218 intergenic not near genes chr2L_10_11975001 chr2L_11975001 RAL-109_125b 687 chr2L 12046476 12046504 chr2L 12046650 12046678 6 174 20.5 22.5 21.5 0.3 202 chr2L 12046476 5` UTR CR44589 + chr2L 12046577 5` UTR CR44589 + chr2L 12046678 5` UTR CR44589 + chr2L_6_12045001 chr2L_12045001 RAL-109_125b 688 chr2L 12046517 12046524 chr2L 12046646 12046698 4 163 17.5 21.5 19.5 0.2 181 chr2L 12046517 5` UTR CR44589 + chr2L 12046608 5` UTR CR44589 + chr2L 12046698 intergenic Plzf -,CR44589 + chr2L_4_12045001 chr2L_12045001 RAL-109_125b 689 chr2L 12067287 12067349 chr2L 12074383 12074451 297 19 7099 6.5 6.5 6.5 2.5 7164 chr2L 12067287 intergenic not near genes chr2L 12070869 intergenic not near genes chr2L 12074451 intergenic not near genes chr2L_19_12070001 chr2L_12070001 RAL-109_125b 690 chr2L 12116852 12116877 chr2L 12116987 12117012 8 135 17.0 17.5 17.2 0.4 160 chr2L 12116852 intron CG17211 + chr2L 12116932 intron CG17211 + chr2L 12117012 intron CG17211 + chr2L_8_12115001 chr2L_12115001 RAL-109_125b 691 chr2L 12121850 12121911 chr2L 12121978 12122043 17 131 16.0 11.5 13.8 1.1 193 chr2L 12121850 intron CG17211 + chr2L 12121946 intron CG17211 + chr2L 12122043 intron CG17211 + chr2L_17_12120001 chr2L_12120001 RAL-109_125b 692 chr2L 12131419 12131483 chr2L 12131565 12131629 11 145 7.5 9.5 8.5 1.2 210 chr2L 12131419 exon rho-6 - chr2L 12131524 intron rho-6 - chr2L 12131629 intron rho-6 - chr2L_11_12130001 chr2L_12130001 RAL-109_125b 693 chr2L 12132689 12132745 chr2L 12132824 12132881 12 136 2.0 13.0 7.5 1.4 192 chr2L 12132689 intron rho-6 - chr2L 12132785 intron rho-6 - chr2L 12132881 intron rho-6 - chr2L_12_12130001 chr2L_12130001 RAL-109_125b 694 chr2L 12135900 12135962 chr2L 12136038 12136063 11 130 18.5 14.0 16.2 0.6 163 chr2L 12135900 intergenic not near genes chr2L 12135982 intergenic not near genes chr2L 12136063 intergenic not near genes chr2L_11_12135001 chr2L_12135001 RAL-109_125b 695 chr2L 12141136 12141173 chr2L 12141281 12141318 5 145 13.0 8.0 10.5 0.4 182 chr2L 12141136 intergenic not near genes chr2L 12141227 intergenic not near genes chr2L 12141318 intergenic not near genes chr2L_5_12140001 chr2L_12140001 RAL-109_125b 696 chr2L 12144191 12144248 chr2L 12144788 12144845 12 596 11.5 20.0 15.8 0.7 654 chr2L 12144191 intron CG31760 + chr2L 12144518 intron CG31760 + chr2L 12144845 intron CG31760 + chr2L_12_12140001 chr2L_12140001 RAL-109_125b 697 chr2L 12179735 12179788 chr2L 12179866 12179924 7 134 18.5 19.5 19.0 0.3 189 chr2L 12179735 intron aret + chr2L 12179830 intron aret + chr2L 12179924 intron aret + chr2L_7_12175001 chr2L_12175001 RAL-109_125b 698 chr2L 12198318 12198334 chr2L 12198447 12198463 6 141 8.0 6.0 7.0 0.8 145 chr2L 12198318 intron aret + chr2L 12198390 intron aret + chr2L 12198463 intron aret + chr2L_6_12195001 chr2L_12195001 RAL-109_125b 699 chr2L 12203268 12203306 chr2L 12203398 12203437 11 130 19.0 20.5 19.8 0.5 169 chr2L 12203268 intron aret + chr2L 12203352 intron aret + chr2L 12203437 intron aret + chr2L_11_12200001 chr2L_12200001 RAL-109_125b 700 chr2L 12210002 12210036 chr2L 12210140 12210160 6 128 16.5 8.0 12.2 0.5 158 chr2L 12210002 intron,3` UTR aret +,CG31759 + chr2L 12210081 intron aret + chr2L 12210160 intron aret + chr2L_6_12210001 chr2L_12210001 RAL-109_125b 701 chr2L 12225388 12225443 chr2L 12225517 12225572 4 129 13.0 5.5 9.2 0.4 184 chr2L 12225388 intron aret + chr2L 12225480 intron aret + chr2L 12225572 intron aret + chr2L_4_12225001 chr2L_12225001 RAL-109_125b 702 chr2L 12269362 12269399 chr2L 12269490 12269527 9 128 18.0 15.5 16.8 0.5 165 chr2L 12269362 intron aret + chr2L 12269444 intron aret + chr2L 12269527 intron aret + chr2L_9_12265001 chr2L_12265001 RAL-109_125b 703 chr2L 12269816 12269849 chr2L 12270081 12270114 4 264 21.0 19.5 20.2 0.2 298 chr2L 12269816 intron aret + chr2L 12269965 intron aret + chr2L 12270114 intron aret + chr2L_4_12265001 chr2L_12265001 RAL-109_125b 704 chr2L 12272121 12272128 chr2L 12272249 12272255 4 128 8.5 9.5 9.0 0.4 134 chr2L 12272121 intron aret + chr2L 12272188 intron aret + chr2L 12272255 intron aret + chr2L_4_12270001 chr2L_12270001 RAL-109_125b 705 chr2L 12272134 12272176 chr2L 12272248 12272302 6 125 4.0 9.5 6.8 0.8 168 chr2L 12272134 intron aret + chr2L 12272218 intron aret + chr2L 12272302 intron aret + chr2L_6_12270001 chr2L_12270001 RAL-109_125b 706 chr2L 12278882 12278936 chr2L 12279012 12279066 13 130 17.0 16.0 16.5 0.7 184 chr2L 12278882 exon aret + chr2L 12278974 intron aret + chr2L 12279066 intron aret + chr2L_13_12275001 chr2L_12275001 RAL-109_125b 707 chr2L 12294183 12294229 chr2L 12294365 12294411 5 182 10.5 12.0 11.2 0.4 228 chr2L 12294183 intron aret + chr2L 12294297 intron aret + chr2L 12294411 intron aret + chr2L_5_12290001 chr2L_12290001 RAL-109_125b 708 chr2L 12299577 12299644 chr2L 12299704 12299771 8 127 19.5 19.0 19.2 0.4 194 chr2L 12299577 intron aret + chr2L 12299674 intron aret + chr2L 12299771 intron aret + chr2L_8_12295001 chr2L_12295001 RAL-109_125b 709 chr2L 12309675 12309748 chr2L 12309807 12309890 14 140 20.0 20.5 20.2 0.7 215 chr2L 12309675 intron aret + chr2L 12309782 intron aret + chr2L 12309890 intron aret + chr2L_14_12305001 chr2L_12305001 RAL-109_125b 710 chr2L 12337256 12337267 chr2L 12337389 12337390 4 133 13.0 11.5 12.2 0.3 134 chr2L 12337256 intergenic not near genes chr2L 12337323 intergenic not near genes chr2L 12337390 intergenic not near genes chr2L_4_12335001 chr2L_12335001 RAL-109_125b 711 chr2L 12366820 12366885 chr2L 12366956 12367021 16 134 9.0 12.0 10.5 1.4 201 chr2L 12366820 intron bru-2 + chr2L 12366920 intron bru-2 + chr2L 12367021 intron bru-2 + chr2L_16_12365001 chr2L_12365001 RAL-109_125b 712 chr2L 12385857 12385927 chr2L 12386062 12386089 4 192 7.0 18.0 12.5 0.3 232 chr2L 12385857 intron bru-2 + chr2L 12385973 intron bru-2 + chr2L 12386089 intron bru-2 + chr2L_4_12385001 chr2L_12385001 RAL-109_125b 713 chr2L 12394939 12394992 chr2L 12395101 12395154 9 160 16.5 15.5 16.0 0.5 215 chr2L 12394939 intron bru-2 + chr2L 12395046 intron bru-2 + chr2L 12395154 intron bru-2 + chr2L_9_12395001 chr2L_12395001 RAL-109_125b 714 chr2L 12396002 12396016 chr2L 12396146 12396160 4 144 13.0 1.5 7.2 0.5 158 chr2L 12396002 exon bru-2 + chr2L 12396081 intron bru-2 + chr2L 12396160 intron bru-2 + chr2L_4_12395001 chr2L_12395001 RAL-109_125b 715 chr2L 12424354 12424370 chr2L 12424480 12424496 4 126 10.5 12.5 11.5 0.3 142 chr2L 12424354 intergenic not near genes chr2L 12424425 intergenic CG6405 + chr2L 12424496 intergenic CG6405 + chr2L_4_12420001 chr2L_12420001 RAL-109_125b 716 chr2L 12426088 12426164 chr2L 12426221 12426244 13 122 22.5 23.5 23.0 0.5 156 chr2L 12426088 exon CG6405 + chr2L 12426166 exon CG6405 + chr2L 12426244 exon CG6405 + chr2L_13_12425001 chr2L_12425001 RAL-109_125b 717 chr2L 12436078 12436121 chr2L 12436209 12436246 7 130 17.5 13.5 15.5 0.4 168 chr2L 12436078 intron Elf + chr2L 12436162 intron Elf + chr2L 12436246 intron Elf + chr2L_7_12435001 chr2L_12435001 RAL-109_125b 718 chr2L 12462520 12462547 chr2L 12462659 12462686 9 139 25.0 9.5 17.2 0.5 166 chr2L 12462520 intron bun - chr2L 12462603 intron bun - chr2L 12462686 intron bun - chr2L_9_12460001 chr2L_12460001 RAL-109_125b 719 chr2L 12480542 12480572 chr2L 12480624 12480699 10 122 19.5 20.0 19.8 0.5 157 chr2L 12480542 intron bun - chr2L 12480620 intron bun - chr2L 12480699 intron bun - chr2L_10_12480001 chr2L_12480001 RAL-109_125b 720 chr2L 12498998 12499013 chr2L 12499125 12499140 6 128 0.0 6.5 3.2 1.4 142 chr2L 12498998 intron bun - chr2L 12499069 intron bun - chr2L 12499140 intron bun - chr2L_6_12495001 chr2L_12495001 RAL-109_125b 721 chr2L 12510091 12510139 chr2L 12510213 12510226 10 118 20.0 16.0 18.0 0.5 135 chr2L 12510091 intron bun - chr2L 12510158 intron bun - chr2L 12510226 intron bun - chr2L_10_12510001 chr2L_12510001 RAL-109_125b 722 chr2L 12529194 12529249 chr2L 12529396 12529451 14 201 17.0 15.5 16.2 0.8 257 chr2L 12529194 intron bun - chr2L 12529322 intron bun - chr2L 12529451 intron bun - chr2L_14_12525001 chr2L_12525001 RAL-109_125b 723 chr2L 12558276 12558283 chr2L 12565455 12565462 HMS-Beagle 4 7179 13.5 5.0 9.2 0.4 7186 chr2L 12558276 intergenic not near genes chr2L 12561869 intergenic not near genes chr2L 12565462 intergenic not near genes chr2L_4_12560001 chr2L_12560001 RAL-109_125b 724 chr2L 12558287 12558353 chr2L 12565452 12565492 HMS-Beagle 18 7176 2.0 5.0 3.5 4.0 7205 chr2L 12558287 intergenic not near genes chr2L 12561890 intergenic not near genes chr2L 12565492 intergenic not near genes chr2L_18_12560001 chr2L_12560001 RAL-109_125b 725 chr2L 12570341 12570375 chr2L 12570480 12570514 4 139 5.5 4.0 4.8 0.7 173 chr2L 12570341 intergenic CR44598 - chr2L 12570428 intergenic CR44598 - chr2L 12570514 intergenic CR44598 - chr2L_4_12570001 chr2L_12570001 RAL-109_125b 726 chr2L 12601767 12601785 chr2L 12601861 12601919 6 126 16.5 17.0 16.8 0.3 152 chr2L 12601767 intron nub + chr2L 12601843 intron nub + chr2L 12601919 intron nub + chr2L_6_12600001 chr2L_12600001 RAL-109_125b 727 chr2L 12609453 12609476 chr2L 12609619 12609642 6 166 8.5 3.5 6.0 0.9 189 chr2L 12609453 intron nub + chr2L 12609548 intron nub + chr2L 12609642 intron nub + chr2L_6_12605001 chr2L_12605001 RAL-109_125b 728 chr2L 12619864 12619872 chr2L 12619988 12619992 5 123 15.0 7.5 11.2 0.4 128 chr2L 12619864 intron,intron nub +,Ref2 - chr2L 12619928 intron,intron nub +,Ref2 - chr2L 12619992 intron,intron nub +,Ref2 - chr2L_5_12615001 chr2L_12615001 RAL-109_125b 729 chr2L 12619877 12619902 chr2L 12619978 12620027 8 122 12.0 7.0 9.5 0.8 150 chr2L 12619877 intron,intron nub +,Ref2 - chr2L 12619952 intron,intron nub +,Ref2 - chr2L 12620027 intron,intron nub +,Ref2 - chr2L_8_12615001 chr2L_12615001 RAL-109_125b 730 chr2L 12634398 12634470 chr2L 12634525 12634597 20 125 13.5 12.5 13.0 1.4 199 chr2L 12634398 intron Ref2 - chr2L 12634498 intron Ref2 - chr2L 12634597 intron Ref2 - chr2L_20_12630001 chr2L_12630001 RAL-109_125b 731 chr2L 12638741 12638788 chr2L 12638894 12638941 8 153 23.0 20.5 21.8 0.4 200 chr2L 12638741 intron Ref2 - chr2L 12638841 intron Ref2 - chr2L 12638941 intron Ref2 - chr2L_8_12635001 chr2L_12635001 RAL-109_125b 732 chr2L 12653757 12653809 chr2L 12653924 12653976 11 164 6.0 9.0 7.5 1.3 219 chr2L 12653757 intergenic not near genes chr2L 12653866 intergenic not near genes chr2L 12653976 intergenic not near genes chr2L_11_12650001 chr2L_12650001 RAL-109_125b 733 chr2L 12677680 12677718 chr2L 12677815 12677853 9 135 17.0 17.5 17.2 0.5 173 chr2L 12677680 intron pdm2 + chr2L 12677766 intron pdm2 + chr2L 12677853 intron pdm2 + chr2L_9_12675001 chr2L_12675001 RAL-109_125b 734 chr2L 12693795 12693807 chr2L 12693922 12693934 4 127 26.5 6.0 16.2 0.2 139 chr2L 12693795 exon CG6153 + chr2L 12693864 3` UTR CG6153 + chr2L 12693934 3` UTR,3` UTR CG6153 +,CG5780 - chr2L_4_12690001 chr2L_12690001 RAL-109_125b 735 chr2L 12693810 12693872 chr2L 12693916 12693999 17 123 9.5 7.0 8.2 1.8 189 chr2L 12693810 exon CG6153 + chr2L 12693904 3` UTR,3` UTR CG6153 +,CG5780 - chr2L 12693999 exon CG5780 - chr2L_17_12690001 chr2L_12690001 RAL-109_125b 736 chr2L 12728879 12728898 chr2L 12729165 12729190 pogo 10 290 19.0 6.5 12.8 0.7 311 chr2L 12728879 intron MRP + chr2L 12729034 intron MRP + chr2L 12729190 exon MRP + chr2L_10_12725001 chr2L_12725001 RAL-109_125b 737 chr2L 12728911 12728939 chr2L 12729179 12729198 pogo 10 280 11.0 11.0 11.0 0.8 287 chr2L 12728911 intron MRP + chr2L 12729054 intron MRP + chr2L 12729198 exon MRP + chr2L_10_12725001 chr2L_12725001 RAL-109_125b 738 chr2L 12731032 12731081 chr2L 12735826 12735898 F-element 19 4813 9.5 9.5 9.5 1.8 4866 chr2L 12731032 intron MRP + chr2L 12733465 intron MRP + chr2L 12735898 intron MRP + chr2L_19_12730001 chr2L_12730001 RAL-109_125b 739 chr2L 12739144 12739197 chr2L 12743970 12744026 Doc 21 4827 10.5 10.5 10.5 1.8 4882 chr2L 12739144 exon MRP + chr2L 12741585 intron MRP + chr2L 12744026 exon MRP + chr2L_21_12740001 chr2L_12740001 RAL-109_125b 740 chr2L 12763794 12763867 chr2L 12764056 12764129 BS 11 262 0.0 0.0 0.0 11.0 335 chr2L 12763794 intergenic not near genes chr2L 12763962 intergenic not near genes chr2L 12764129 intergenic not near genes chr2L_11_12760001 chr2L_12760001 RAL-109_125b 741 chr2L 12766712 12766755 chr2L 12766840 12766883 11 127 10.5 7.5 9.0 1.1 171 chr2L 12766712 intergenic not near genes chr2L 12766798 intergenic not near genes chr2L 12766883 intergenic not near genes chr2L_11_12765001 chr2L_12765001 RAL-109_125b 742 chr2L 12769579 12769634 chr2L 12769726 12769792 11 151 20.0 26.5 23.2 0.5 213 chr2L 12769579 intergenic not near genes chr2L 12769686 intergenic not near genes chr2L 12769792 intergenic not near genes chr2L_11_12765001 chr2L_12765001 RAL-109_125b 743 chr2L 12781775 12781810 chr2L 12789268 12789310 Quasimodo 10 7496 10.5 10.0 10.2 0.9 7535 chr2L 12781775 intergenic not near genes chr2L 12785542 intergenic not near genes chr2L 12789310 intergenic not near genes chr2L_10_12785001 chr2L_12785001 RAL-109_125b 744 chr2L 12791571 12791623 chr2L 12795296 12795348 F-element 15 3723 0.0 6.0 3.0 3.8 3777 chr2L 12791571 intergenic not near genes chr2L 12793460 intergenic not near genes chr2L 12795348 intergenic not near genes chr2L_15_12790001 chr2L_12790001 RAL-109_125b 745 chr2L 12835518 12835562 chr2L 12835677 12835721 8 158 16.5 13.0 14.8 0.5 203 chr2L 12835518 intergenic not near genes chr2L 12835620 intergenic not near genes chr2L 12835721 intergenic not near genes chr2L_8_12835001 chr2L_12835001 RAL-109_125b 746 chr2L 12861659 12861725 chr2L 12863165 12863242 hobo 24 1510 6.0 8.5 7.2 2.9 1583 chr2L 12861659 intergenic not near genes chr2L 12862450 intergenic not near genes chr2L 12863242 intergenic not near genes chr2L_24_12860001 chr2L_12860001 RAL-109_125b 747 chr2L 12863872 12863948 chr2L 12864007 12864083 4 135 13.5 13.0 13.2 0.3 211 chr2L 12863872 intergenic not near genes chr2L 12863978 intergenic not near genes chr2L 12864083 intergenic not near genes chr2L_4_12860001 chr2L_12860001 RAL-109_125b 748 chr2L 12893985 12894009 chr2L 12895502 12895526 hobo 6 1517 18.5 6.5 12.5 0.4 1541 chr2L 12893985 intergenic not near genes chr2L 12894756 intergenic not near genes chr2L 12895526 intergenic not near genes chr2L_6_12890001 chr2L_12890001 RAL-109_125b 749 chr2L 12894015 12894045 chr2L 12895494 12895762 hobo 8 1600 13.0 5.5 9.2 0.8 1747 chr2L 12894015 intergenic not near genes chr2L 12894888 intergenic not near genes chr2L 12895762 intergenic not near genes chr2L_8_12890001 chr2L_12890001 RAL-109_125b 750 chr2L 12895485 12895506 chr2L 12895756 12895816 7 299 8.0 19.0 13.5 0.5 331 chr2L 12895485 intergenic not near genes chr2L 12895650 intergenic not near genes chr2L 12895816 intergenic not near genes chr2L_7_12895001 chr2L_12895001 RAL-109_125b 751 chr2L 12896767 12896827 chr2L 12896906 12896959 11 134 17.0 14.0 15.5 0.7 192 chr2L 12896767 intergenic not near genes chr2L 12896863 intergenic not near genes chr2L 12896959 intergenic not near genes chr2L_11_12895001 chr2L_12895001 RAL-109_125b 752 chr2L 12930463 12930466 chr2L 12930584 12930592 5 125 28.5 20.0 24.2 0.2 129 chr2L 12930463 intergenic not near genes chr2L 12930528 intergenic not near genes chr2L 12930592 intergenic not near genes chr2L_5_12930001 chr2L_12930001 RAL-109_125b 753 chr2L 12930471 12930486 chr2L 12930582 12930612 4 120 25.5 19.5 22.5 0.2 141 chr2L 12930471 intergenic not near genes chr2L 12930542 intergenic not near genes chr2L 12930612 intergenic not near genes chr2L_4_12930001 chr2L_12930001 RAL-109_125b 754 chr2L 12933810 12933880 chr2L 12941327 12941396 blood 19 7514 6.5 12.0 9.2 1.9 7586 chr2L 12933810 intergenic not near genes chr2L 12937603 intergenic not near genes chr2L 12941396 intergenic not near genes chr2L_19_12935001 chr2L_12935001 RAL-109_125b 755 chr2L 12981165 12981214 chr2L 12981364 12981423 6 207 21.5 17.5 19.5 0.3 258 chr2L 12981165 exon Vha68-3 + chr2L 12981294 intergenic Vha68-3 + chr2L 12981423 intergenic Vha68-3 + chr2L_6_12980001 chr2L_12980001 RAL-109_125b 756 chr2L 12989012 12989073 chr2L 12989150 12989211 10 136 13.5 20.5 17.0 0.6 199 chr2L 12989012 intergenic not near genes chr2L 12989112 intergenic not near genes chr2L 12989211 intergenic not near genes chr2L_10_12985001 chr2L_12985001 RAL-109_125b 757 chr2L 13036204 13036262 chr2L 13036496 13036554 X-element 10 292 16.0 17.0 16.5 0.6 350 chr2L 13036204 intron CG9932 - chr2L 13036379 intron CG9932 - chr2L 13036554 intron CG9932 - chr2L_10_13035001 chr2L_13035001 RAL-109_125b 758 chr2L 13069287 13069362 chr2L 13069421 13069448 9 124 18.0 9.5 13.8 0.6 161 chr2L 13069287 intergenic not near genes chr2L 13069368 intergenic not near genes chr2L 13069448 intergenic not near genes chr2L_9_13065001 chr2L_13065001 RAL-109_125b 759 chr2L 13070886 13070897 chr2L 13070972 13070987 4 103 25.0 21.0 23.0 0.2 101 chr2L 13070886 intergenic not near genes chr2L 13070936 intergenic not near genes chr2L 13070987 intergenic not near genes chr2L_4_13070001 chr2L_13070001 RAL-109_125b 760 chr2L 13073956 13074002 chr2L 13074063 13074139 10 128 11.0 18.0 14.5 0.6 183 chr2L 13073956 intergenic not near genes chr2L 13074048 intergenic not near genes chr2L 13074139 intergenic not near genes chr2L_10_13070001 chr2L_13070001 RAL-109_125b 761 chr2L 13085685 13085757 chr2L 13085818 13085855 17 130 20.0 19.5 19.8 0.8 170 chr2L 13085685 intergenic not near genes chr2L 13085770 intergenic not near genes chr2L 13085855 intergenic not near genes chr2L_17_13085001 chr2L_13085001 RAL-109_125b 762 chr2L 13110979 13111008 chr2L 13111114 13111143 5 132 11.5 8.5 10.0 0.5 164 chr2L 13110979 intergenic not near genes chr2L 13111061 intergenic not near genes chr2L 13111143 intergenic not near genes chr2L_5_13110001 chr2L_13110001 RAL-109_125b 763 chr2L 13144002 13144056 chr2L 13144109 13144170 19 115 19.0 20.5 19.8 0.9 168 chr2L 13144002 intergenic CG16978 - chr2L 13144086 intergenic CG16978 - chr2L 13144170 intergenic not near genes chr2L_19_13140001 chr2L_13140001 RAL-109_125b 764 chr2L 13193318 13193354 chr2L 13193450 13193486 9 132 24.5 28.5 26.5 0.3 168 chr2L 13193318 intron Edem2 + chr2L 13193402 intron Edem2 + chr2L 13193486 exon Edem2 + chr2L_9_13190001 chr2L_13190001 RAL-109_125b 765 chr2L 13215346 13215411 chr2L 13215671 13215736 13 324 15.5 22.0 18.8 0.7 390 chr2L 13215346 5` UTR kek4 - chr2L 13215541 intergenic kek4 -,snRNA:U2:34ABb +,snRNA:U2:34ABc + chr2L 13215736 intergenic snRNA:U2:34ABb +,snRNA:U2:34ABc +,kek4 - chr2L_13_13215001 chr2L_13215001 RAL-109_125b 766 chr2L 13241902 13241933 chr2L 13244343 13244352 BS 7 2432 5.0 5.0 5.0 1.2 2450 chr2L 13241902 5` UTR CR45330 + chr2L 13243127 intron CR45330 + chr2L 13244352 5` UTR CR45330 + chr2L_7_13240001 chr2L_13240001 RAL-109_125b 767 chr2L 13266336 13266377 chr2L 13266474 13266515 6 132 17.0 24.0 20.5 0.3 179 chr2L 13266336 intron CG44085 + chr2L 13266426 intron CG44085 + chr2L 13266515 intron CG44085 + chr2L_6_13265001 chr2L_13265001 RAL-109_125b 768 chr2L 13316887 13316902 chr2L 13317020 13317020 4 129 18.0 18.5 18.2 0.2 133 chr2L 13316887 intron CG43778 - chr2L 13316954 intron CG43778 - chr2L 13317020 intron CG43778 - chr2L_4_13315001 chr2L_13315001 RAL-109_125b 769 chr2L 13321897 13321925 chr2L 13321989 13322053 6 121 18.5 16.0 17.2 0.3 156 chr2L 13321897 intron CG43778 - chr2L 13321975 intron CG43778 - chr2L 13322053 intron CG43778 - chr2L_6_13320001 chr2L_13320001 RAL-109_125b 770 chr2L 13323105 13323176 chr2L 13324161 13324232 17 1056 14.5 11.0 12.8 1.2 1127 chr2L 13323105 intron CG43778 - chr2L 13323668 intron CG43778 - chr2L 13324232 intron CG43778 - chr2L_17_13320001 chr2L_13320001 RAL-109_125b 771 chr2L 13330012 13330040 chr2L 13330140 13330168 6 128 12.5 10.5 11.5 0.5 156 chr2L 13330012 intron CG43778 - chr2L 13330090 intron CG43778 - chr2L 13330168 intron CG43778 - chr2L_6_13330001 chr2L_13330001 RAL-109_125b 772 chr2L 13332502 13332553 chr2L 13332631 13332695 4 136 12.5 11.0 11.8 0.3 193 chr2L 13332502 intergenic not near genes chr2L 13332598 intergenic not near genes chr2L 13332695 intergenic not near genes chr2L_4_13330001 chr2L_13330001 RAL-109_125b 773 chr2L 13341732 13341798 chr2L 13342395 13342461 18 659 16.5 12.5 14.5 1.2 729 chr2L 13341732 intergenic not near genes chr2L 13342096 intergenic not near genes chr2L 13342461 intergenic not near genes chr2L_18_13340001 chr2L_13340001 RAL-109_125b 774 chr2L 13342025 13342057 chr2L 13342150 13342184 7 127 2.0 0.0 1.0 3.5 159 chr2L 13342025 intergenic not near genes chr2L 13342104 intergenic not near genes chr2L 13342184 intergenic not near genes chr2L_7_13340001 chr2L_13340001 RAL-109_125b 775 chr2L 13398674 13398744 chr2L 13398804 13398878 7 133 19.5 18.0 18.8 0.4 204 chr2L 13398674 intergenic CG10859 -,CR44600 -,CG7110 + chr2L 13398776 intergenic CR44600 -,CG10859 -,CG7110 + chr2L 13398878 3` UTR CR44600 - chr2L_7_13395001 chr2L_13395001 RAL-109_125b 776 chr2L 13405617 13405668 chr2L 13410449 13410515 Doc 23 4842 12.0 11.5 11.8 1.8 4898 chr2L 13405617 exon CG7110 + chr2L 13408066 intron CG7110 + chr2L 13410515 exon CG7110 + chr2L_23_13405001 chr2L_13405001 RAL-109_125b 777 chr2L 13437298 13437375 chr2L 13437429 13437509 5 133 22.0 16.0 19.0 0.2 211 chr2L 13437298 intron,intron CG42784 +,Tehao + chr2L 13437404 intron,intron CG42784 +,Tehao + chr2L 13437509 intron,intron CG42784 +,Tehao + chr2L_5_13435001 chr2L_13435001 RAL-109_125b 778 chr2L 13437619 13437633 chr2L 13437779 13437793 4 160 15.0 31.0 23.0 0.2 174 chr2L 13437619 intron,intron CG42784 +,Tehao + chr2L 13437706 intron,intron CG42784 +,Tehao + chr2L 13437793 intron,intron CG42784 +,Tehao + chr2L_4_13435001 chr2L_13435001 RAL-109_125b 779 chr2L 13449423 13449486 chr2L 13456909 13456972 Quasimodo 12 7486 7.5 12.0 9.8 1.1 7549 chr2L 13449423 intron,intron CG42784 +,Hsp60D - chr2L 13453198 intron CG42784 + chr2L 13456972 intron CG42784 + chr2L_12_13450001 chr2L_13450001 RAL-109_125b 780 chr2L 13460122 13460193 chr2L 13460265 13460335 11 143 23.5 23.0 23.2 0.5 213 chr2L 13460122 intron,exon CG42784 +,CG42810 + chr2L 13460228 intron CG42784 + chr2L 13460335 intron CG42784 + chr2L_11_13460001 chr2L_13460001 RAL-109_125b 781 chr2L 13481433 13481466 chr2L 13482063 13482123 jockey 16 652 9.5 10.0 9.8 1.5 690 chr2L 13481433 intron CG42784 + chr2L 13481778 intron CG42784 + chr2L 13482123 intron CG42784 + chr2L_16_13480001 chr2L_13480001 RAL-109_125b 782 chr2L 13522248 13522277 chr2L 13527598 13527623 Transpac 5 5349 2.0 8.5 5.2 0.8 5375 chr2L 13522248 intron B4 - chr2L 13524936 intron B4 - chr2L 13527623 intron B4 - chr2L_5_13520001 chr2L_13520001 RAL-109_125b 783 chr2L 13559280 13559321 chr2L 13559377 13559424 10 120 19.0 20.5 19.8 0.5 144 chr2L 13559280 intron kuz + chr2L 13559352 intron kuz + chr2L 13559424 intron kuz + chr2L_10_13555001 chr2L_13555001 RAL-109_125b 784 chr2L 13560371 13560420 chr2L 13565242 13565291 F-element 14 4870 9.0 9.5 9.2 1.4 4920 chr2L 13560371 intron kuz + chr2L 13562831 intron kuz + chr2L 13565291 intron kuz + chr2L_14_13560001 chr2L_13560001 RAL-109_125b 785 chr2L 13622094 13622226 chr2L 13622242 13622368 16 148 8.5 7.5 8.0 1.8 274 chr2L 13622094 intron kuz + chr2L 13622231 intron kuz + chr2L 13622368 intron kuz + chr2L_16_13620001 chr2L_13620001 RAL-109_125b 786 chr2L 13628902 13628974 chr2L 13629048 13629120 13 144 20.0 16.0 18.0 0.7 218 chr2L 13628902 intron kuz + chr2L 13629011 intron kuz + chr2L 13629120 intron kuz + chr2L_13_13625001 chr2L_13625001 RAL-109_125b 787 chr2L 13640951 13641016 chr2L 13641098 13641163 9 143 20.0 15.5 17.8 0.5 212 chr2L 13640951 intron ics - chr2L 13641057 intron ics - chr2L 13641163 exon ics - chr2L_9_13640001 chr2L_13640001 RAL-109_125b 788 chr2L 13684221 13684283 chr2L 13684347 13684409 4 126 23.0 25.5 24.2 0.2 188 chr2L 13684221 exon CG31814 - chr2L 13684315 intron CG31814 - chr2L 13684409 exon CG31814 - chr2L_4_13680001 chr2L_13680001 RAL-109_125b 789 chr2L 13690691 13690711 chr2L 13693122 13693142 6 2431 36.0 33.5 34.8 0.2 2451 chr2L 13690691 intron CG31814 - chr2L 13691916 intron CG31814 - chr2L 13693142 intron CG31814 - chr2L_6_13690001 chr2L_13690001 RAL-109_125b 790 chr2L 13690719 13690752 chr2L 13693119 13693177 12 2426 34.5 32.5 33.5 0.3 2458 chr2L 13690719 intron CG31814 - chr2L 13691948 intron CG31814 - chr2L 13693177 intron CG31814 - chr2L_12_13690001 chr2L_13690001 RAL-109_125b 791 chr2L 13690528 13690600 chr2L 13693932 13694004 16 3406 40.0 27.0 33.5 0.5 3476 chr2L 13690528 exon CG31814 - chr2L 13692266 intron CG31814 - chr2L 13694004 intron CG31814 - chr2L_16_13690001 chr2L_13690001 RAL-109_125b 792 chr2L 13710531 13710605 chr2L 13710667 13710756 4 136 13.0 11.5 12.2 0.3 225 chr2L 13710531 intron,3` UTR CG31814 -,CG7311 + chr2L 13710644 intron CG31814 - chr2L 13710756 intron CG31814 - chr2L_4_13710001 chr2L_13710001 RAL-109_125b 793 chr2L 13713518 13713567 chr2L 13713644 13713693 15 126 8.5 5.5 7.0 1.9 175 chr2L 13713518 intron CG31814 - chr2L 13713606 intron CG31814 - chr2L 13713693 intron CG31814 - chr2L_15_13710001 chr2L_13710001 RAL-109_125b 794 chr2L 13745080 13745134 chr2L 13745358 13745411 8 275 14.5 15.0 14.8 0.5 331 chr2L 13745080 intergenic not near genes chr2L 13745246 intergenic not near genes chr2L 13745411 intergenic not near genes chr2L_8_13745001 chr2L_13745001 RAL-109_125b 795 chr2L 13761767 13761825 chr2L 13762928 13762955 Doc 20 1157 11.0 11.5 11.2 1.6 1188 chr2L 13761767 intron TM9SF4 + chr2L 13762361 intron TM9SF4 + chr2L 13762955 intron TM9SF4 + chr2L_20_13760001 chr2L_13760001 RAL-109_125b 796 chr2L 13800132 13800186 chr2L 13800286 13800340 9 154 13.0 16.5 14.8 0.6 208 chr2L 13800132 intergenic Sec71 + chr2L 13800236 intergenic not near genes chr2L 13800340 intergenic not near genes chr2L_9_13800001 chr2L_13800001 RAL-109_125b 797 chr2L 13804324 13804340 chr2L 13804523 13804539 4 198 33.0 26.0 29.5 0.1 215 chr2L 13804324 intron CAH1 + chr2L 13804432 intron CAH1 + chr2L 13804539 intron CAH1 + chr2L_4_13800001 chr2L_13800001 RAL-109_125b 798 chr2L 13804343 13804386 chr2L 13804522 13804585 12 191 26.5 26.0 26.2 0.4 242 chr2L 13804343 intron CAH1 + chr2L 13804464 intron CAH1 + chr2L 13804585 intron CAH1 + chr2L_12_13800001 chr2L_13800001 RAL-109_125b 799 chr2L 13842093 13842164 chr2L 13842227 13842298 11 133 27.5 18.0 22.8 0.5 205 chr2L 13842093 intron CenG1A + chr2L 13842196 intron CenG1A + chr2L 13842298 intron CenG1A + chr2L_11_13840001 chr2L_13840001 RAL-109_125b 800 chr2L 13853046 13853069 chr2L 13862246 13862269 roo 8 9199 13.0 7.0 10.0 0.7 9223 chr2L 13853046 intron CenG1A + chr2L 13857658 intron CenG1A + chr2L 13862269 intron CenG1A + chr2L_8_13855001 chr2L_13855001 RAL-109_125b 801 chr2L 13853070 13853100 chr2L 13862239 13862300 roo 15 9190 7.5 7.0 7.2 1.8 9230 chr2L 13853070 intron CenG1A + chr2L 13857685 intron CenG1A + chr2L 13862300 intron CenG1A + chr2L_15_13855001 chr2L_13855001 RAL-109_125b 802 chr2L 13867846 13867921 chr2L 13867987 13868033 10 130 18.0 18.5 18.2 0.5 187 chr2L 13867846 intron CenG1A + chr2L 13867940 intron CenG1A + chr2L 13868033 intron CenG1A + chr2L_10_13865001 chr2L_13865001 RAL-109_125b 803 chr2L 13918778 13918789 chr2L 13918915 13918926 4 137 18.5 19.0 18.8 0.2 148 chr2L 13918778 intron Ance-3 + chr2L 13918852 intron Ance-3 + chr2L 13918926 intron Ance-3 + chr2L_4_13915001 chr2L_13915001 RAL-109_125b 804 chr2L 13918797 13918841 chr2L 13918913 13918978 8 134 17.5 20.0 18.8 0.4 181 chr2L 13918797 intron Ance-3 + chr2L 13918888 intron Ance-3 + chr2L 13918978 intron Ance-3 + chr2L_8_13915001 chr2L_13915001 RAL-109_125b 805 chr2L 13933002 13933020 chr2L 13933086 13933127 4 95 21.0 18.5 19.8 0.2 125 chr2L 13933002 intron,exon Ance-3 +,CG16885 - chr2L 13933064 intron,exon Ance-3 +,CG16885 - chr2L 13933127 intron,exon Ance-3 +,CG16885 - chr2L_4_13930001 chr2L_13930001 RAL-109_125b 806 chr2L 13934174 13934211 chr2L 13934301 13934338 5 127 20.5 14.0 17.2 0.3 164 chr2L 13934174 intron,intron Ance-3 +,CG16885 - chr2L 13934256 intron,intron Ance-3 +,CG16885 - chr2L 13934338 intron,intron Ance-3 +,CG16885 - chr2L_5_13930001 chr2L_13930001 RAL-109_125b 807 chr2L 13972617 13972675 chr2L 13972754 13972812 10 136 13.0 15.0 14.0 0.7 195 chr2L 13972617 intron He - chr2L 13972714 intron He - chr2L 13972812 exon He - chr2L_10_13970001 chr2L_13970001 RAL-109_125b 808 chr2L 13988231 13988282 chr2L 13988368 13988414 12 136 20.5 18.5 19.5 0.6 183 chr2L 13988231 intron rk - chr2L 13988322 intron rk - chr2L 13988414 intron rk - chr2L_12_13985001 chr2L_13985001 RAL-109_125b 809 chr2L 14002772 14002811 chr2L 14003155 14003215 15 396 13.0 8.0 10.5 1.3 443 chr2L 14002772 intergenic not near genes chr2L 14002994 intergenic not near genes chr2L 14003215 intergenic not near genes chr2L_15_14000001 chr2L_14000001 RAL-109_125b 810 chr2L 14020366 14020444 chr2L 14020498 14020576 11 128 17.0 22.5 19.8 0.5 210 chr2L 14020366 intergenic CR44849 +,NimC3 - chr2L 14020471 intergenic CR44849 +,NimC3 - chr2L 14020576 intergenic CR44849 +,NimC3 - chr2L_11_14020001 chr2L_14020001 RAL-109_125b 811 chr2L 14073636 14073662 chr2L 14074282 14074327 6 656 14.5 19.5 17.0 0.3 691 chr2L 14073636 intron nAChRalpha5 + chr2L 14073982 intron nAChRalpha5 + chr2L 14074327 intron nAChRalpha5 + chr2L_6_14070001 chr2L_14070001 RAL-109_125b 812 chr2L 14121040 14121110 chr2L 14121176 14121246 12 135 15.5 18.0 16.8 0.7 206 chr2L 14121040 intergenic not near genes chr2L 14121143 intergenic not near genes chr2L 14121246 intergenic not near genes chr2L_12_14120001 chr2L_14120001 RAL-109_125b 813 chr2L 14126617 14126666 chr2L 14126715 14126780 9 112 20.0 21.0 20.5 0.4 163 chr2L 14126617 intergenic not near genes chr2L 14126698 intergenic not near genes chr2L 14126780 intergenic not near genes chr2L_9_14125001 chr2L_14125001 RAL-109_125b 814 chr2L 14135208 14135226 chr2L 14135339 14135349 4 129 24.0 10.5 17.2 0.2 141 chr2L 14135208 intron CG17341 + chr2L 14135278 intron CG17341 + chr2L 14135349 intron CG17341 + chr2L_4_14135001 chr2L_14135001 RAL-109_125b 815 chr2L 14148623 14148701 chr2L 14148791 14148863 9 167 16.0 20.5 18.2 0.5 240 chr2L 14148623 intron CG17341 + chr2L 14148743 intron CG17341 + chr2L 14148863 intron CG17341 + chr2L_9_14145001 chr2L_14145001 RAL-109_125b 816 chr2L 14152580 14152605 chr2L 14152716 14152746 4 140 13.0 16.0 14.5 0.3 166 chr2L 14152580 intron CG17341 + chr2L 14152663 intron CG17341 + chr2L 14152746 intron CG17341 + chr2L_4_14150001 chr2L_14150001 RAL-109_125b 817 chr2L 14180015 14180094 chr2L 14180141 14180220 27 126 8.0 7.5 7.8 3.1 205 chr2L 14180015 intron CG43333 - chr2L 14180118 intron CG43333 - chr2L 14180220 exon CG43333 - chr2L_27_14180001 chr2L_14180001 RAL-109_125b 818 chr2L 14235661 14235731 chr2L 14235805 14235874 11 144 12.0 16.5 14.2 0.7 213 chr2L 14235661 5` UTR CR44728 + chr2L 14235768 5` UTR CR44728 + chr2L 14235874 5` UTR CR44728 + chr2L_11_14235001 chr2L_14235001 RAL-109_125b 819 chr2L 14246236 14246312 chr2L 14246363 14246449 7 133 9.5 10.0 9.8 0.6 213 chr2L 14246236 intergenic not near genes chr2L 14246342 intergenic not near genes chr2L 14246449 intergenic not near genes chr2L_7_14245001 chr2L_14245001 RAL-109_125b 820 chr2L 14268545 14268585 chr2L 14268672 14268712 10 127 20.0 21.5 20.8 0.5 167 chr2L 14268545 intron wb + chr2L 14268628 intron wb + chr2L 14268712 intron wb + chr2L_10_14265001 chr2L_14265001 RAL-109_125b 821 chr2L 14298987 14299002 chr2L 14299405 14299420 4 418 28.5 9.5 19.0 0.2 433 chr2L 14298987 intron wb + chr2L 14299204 intron wb + chr2L 14299420 intron wb + chr2L_4_14295001 chr2L_14295001 RAL-109_125b 822 chr2L 14299004 14299037 chr2L 14299402 14299467 5 422 27.0 9.5 18.2 0.3 463 chr2L 14299004 intron wb + chr2L 14299236 intron wb + chr2L 14299467 intron wb + chr2L_5_14295001 chr2L_14295001 RAL-109_125b 823 chr2L 14301714 14301727 chr2L 14301847 14301860 6 133 9.5 1.5 5.5 0.9 146 chr2L 14301714 intron wb + chr2L 14301787 intron wb + chr2L 14301860 intron wb + chr2L_6_14300001 chr2L_14300001 RAL-109_125b 824 chr2L 14374730 14374788 chr2L 14374871 14374884 13 136 20.5 15.5 18.0 0.7 154 chr2L 14374730 intergenic not near genes chr2L 14374807 intergenic not near genes chr2L 14374884 intergenic not near genes chr2L_13_14370001 chr2L_14370001 RAL-109_125b 825 chr2L 14409995 14410063 chr2L 14410132 14410208 9 144 7.5 7.0 7.2 1.1 213 chr2L 14409995 5` UTR CR44733 + chr2L 14410102 intergenic CR44733 + chr2L 14410208 intergenic CR44733 + chr2L_9_14410001 chr2L_14410001 RAL-109_125b 826 chr2L 14423000 14423024 chr2L 14423136 14423160 6 135 15.5 11.5 13.5 0.4 160 chr2L 14423000 intergenic not near genes chr2L 14423080 intergenic not near genes chr2L 14423160 intergenic not near genes chr2L_6_14420001 chr2L_14420001 RAL-109_125b 827 chr2L 14424166 14424192 chr2L 14424305 14424331 5 139 18.0 25.5 21.8 0.2 165 chr2L 14424166 intergenic Cpr35B - chr2L 14424248 intergenic Cpr35B - chr2L 14424331 3` UTR Cpr35B - chr2L_5_14420001 chr2L_14420001 RAL-109_125b 828 chr2L 14465562 14465616 chr2L 14469089 14469143 hopper2 14 3526 6.0 7.0 6.5 1.9 3581 chr2L 14465562 intergenic not near genes chr2L 14467352 intergenic not near genes chr2L 14469143 intergenic not near genes chr2L_14_14465001 chr2L_14465001 RAL-109_125b 829 chr2L 14525527 14525583 chr2L 14525659 14525715 10 132 23.0 19.5 21.2 0.5 188 chr2L 14525527 exon CG33648 + chr2L 14525621 exon CG33648 + chr2L 14525715 intergenic CG33648 + chr2L_10_14525001 chr2L_14525001 RAL-109_125b 830 chr2L 14549108 14549178 chr2L 14549234 14549276 20 124 27.5 28.5 28.0 0.7 168 chr2L 14549108 5` UTR CG4218 - chr2L 14549192 intergenic CG4218 - chr2L 14549276 intergenic CG4218 - chr2L_20_14545001 chr2L_14545001 RAL-109_125b 831 chr2L 14554124 14554197 chr2L 14554251 14554303 11 117 23.5 20.5 22.0 0.5 179 chr2L 14554124 intergenic not near genes chr2L 14554214 intergenic not near genes chr2L 14554303 intergenic not near genes chr2L_11_14550001 chr2L_14550001 RAL-109_125b 832 chr2L 14565884 14565959 chr2L 14566299 14566374 9 412 10.5 10.5 10.5 0.8 490 chr2L 14565884 intergenic not near genes chr2L 14566129 intergenic not near genes chr2L 14566374 intergenic not near genes chr2L_9_14565001 chr2L_14565001 RAL-109_125b 833 chr2L 14570671 14570718 chr2L 14570802 14570848 5 130 2.0 7.5 4.8 0.9 177 chr2L 14570671 intergenic not near genes chr2L 14570760 intergenic not near genes chr2L 14570848 intergenic not near genes chr2L_5_14570001 chr2L_14570001 RAL-109_125b 834 chr2L 14580583 14580641 chr2L 14580790 14580820 11 196 15.5 14.5 15.0 0.7 237 chr2L 14580583 intergenic not near genes chr2L 14580702 intergenic not near genes chr2L 14580820 intergenic not near genes chr2L_11_14580001 chr2L_14580001 RAL-109_125b 835 chr2L 14588341 14588411 chr2L 14588545 14588581 18 201 1.0 8.0 4.5 3.3 240 chr2L 14588341 intergenic CG42680 - chr2L 14588461 intergenic CG42680 - chr2L 14588581 intergenic CG42680 - chr2L_18_14585001 chr2L_14585001 RAL-109_125b 836 chr2L 14588655 14588672 chr2L 14588996 14589013 7 341 5.0 10.0 7.5 0.8 358 chr2L 14588655 intergenic CG42680 - chr2L 14588834 intergenic not near genes chr2L 14589013 intergenic not near genes chr2L_7_14585001 chr2L_14585001 RAL-109_125b 837 chr2L 14601933 14601944 chr2L 14602067 14602068 4 132 34.0 23.0 28.5 0.1 135 chr2L 14601933 exon osp - chr2L 14602000 exon osp - chr2L 14602068 intron osp - chr2L_4_14600001 chr2L_14600001 RAL-109_125b 838 chr2L 14601946 14602001 chr2L 14602064 14602135 9 130 25.5 23.5 24.5 0.4 189 chr2L 14601946 exon osp - chr2L 14602040 intron osp - chr2L 14602135 exon osp - chr2L_9_14600001 chr2L_14600001 RAL-109_125b 839 chr2L 14605610 14605633 chr2L 14605741 14605754 5 126 21.0 20.0 20.5 0.2 144 chr2L 14605610 intron osp - chr2L 14605682 intron osp - chr2L 14605754 intron osp - chr2L_5_14605001 chr2L_14605001 RAL-109_125b 840 chr2L 14618869 14618889 chr2L 14619300 14619320 jockey 12 431 6.5 2.5 4.5 2.2 451 chr2L 14618869 intron,3` UTR,3` UTR osp -,Adh +,Adhr + chr2L 14619094 intron osp - chr2L 14619320 intron osp - chr2L_12_14615001 chr2L_14615001 RAL-109_125b 841 chr2L 14640903 14640942 chr2L 14641738 14641749 5 829 13.0 19.0 16.0 0.3 846 chr2L 14640903 intron osp - chr2L 14641326 intron osp - chr2L 14641749 intron osp - chr2L_5_14640001 chr2L_14640001 RAL-109_125b 842 chr2L 14642553 14642567 chr2L 14651766 14651780 roo 6 9213 5.0 9.5 7.2 0.7 9227 chr2L 14642553 intron osp - chr2L 14647166 intron osp - chr2L 14651780 intron osp - chr2L_6_14645001 chr2L_14645001 RAL-109_125b 843 chr2L 14686625 14686691 chr2L 14686776 14686778 6 142 14.0 6.5 10.2 0.5 153 chr2L 14686625 intron osp - chr2L 14686702 intron osp - chr2L 14686778 intron osp - chr2L_6_14685001 chr2L_14685001 RAL-109_125b 844 chr2L 14707134 14707232 chr2L 14707270 14707400 19 146 7.0 5.0 6.0 2.7 266 chr2L 14707134 intergenic not near genes chr2L 14707267 intergenic not near genes chr2L 14707400 intergenic not near genes chr2L_19_14705001 chr2L_14705001 RAL-109_125b 845 chr2L 14715497 14715562 chr2L 14715638 14715703 15 141 23.5 24.5 24.0 0.6 206 chr2L 14715497 intergenic not near genes chr2L 14715600 intergenic not near genes chr2L 14715703 intergenic not near genes chr2L_15_14715001 chr2L_14715001 RAL-109_125b 846 chr2L 14716562 14716629 chr2L 14716690 14716758 14 125 20.5 20.5 20.5 0.7 196 chr2L 14716562 intergenic not near genes chr2L 14716660 intergenic not near genes chr2L 14716758 intergenic not near genes chr2L_14_14715001 chr2L_14715001 RAL-109_125b 847 chr2L 14724452 14724506 chr2L 14724581 14724635 8 128 17.5 16.0 16.8 0.4 183 chr2L 14724452 intergenic CG42685 - chr2L 14724544 intergenic CG42685 - chr2L 14724635 3` UTR CG42685 - chr2L_8_14720001 chr2L_14720001 RAL-109_125b 848 chr2L 14747489 14747553 chr2L 14747626 14747689 7 132 16.5 19.5 18.0 0.4 200 chr2L 14747489 intergenic not near genes chr2L 14747589 intergenic not near genes chr2L 14747689 intergenic not near genes chr2L_7_14745001 chr2L_14745001 RAL-109_125b 849 chr2L 14753241 14753309 chr2L 14753383 14753440 8 141 17.5 8.5 13.0 0.6 199 chr2L 14753241 intergenic not near genes chr2L 14753340 intergenic not near genes chr2L 14753440 intergenic not near genes chr2L_8_14750001 chr2L_14750001 RAL-109_125b 850 chr2L 14768884 14768958 chr2L 14769012 14769086 20 128 0.0 7.5 3.8 4.2 202 chr2L 14768884 intergenic not near genes chr2L 14768985 intergenic not near genes chr2L 14769086 intergenic not near genes chr2L_20_14765001 chr2L_14765001 RAL-109_125b 851 chr2L 14778766 14778826 chr2L 14779104 14779164 9 330 8.5 9.5 9.0 0.9 398 chr2L 14778766 intergenic not near genes chr2L 14778965 intergenic not near genes chr2L 14779164 intergenic not near genes chr2L_9_14775001 chr2L_14775001 RAL-109_125b 852 chr2L 14803833 14803904 chr2L 14809086 14809157 copia 24 5249 10.0 8.0 9.0 2.4 5324 chr2L 14803833 intergenic not near genes chr2L 14806495 intergenic not near genes chr2L 14809157 intergenic not near genes chr2L_24_14805001 chr2L_14805001 RAL-109_125b 853 chr2L 14839702 14839779 chr2L 14839828 14839905 15 125 13.0 13.5 13.2 1.1 203 chr2L 14839702 intergenic not near genes chr2L 14839804 intergenic not near genes chr2L 14839905 intergenic not near genes chr2L_15_14835001 chr2L_14835001 RAL-109_125b 854 chr2L 14840943 14841004 chr2L 14841070 14841141 15 134 5.5 8.5 7.0 1.9 198 chr2L 14840943 3` UTR CR43805 - chr2L 14841042 3` UTR CR43805 - chr2L 14841141 3` UTR CR43805 - chr2L_15_14840001 chr2L_14840001 RAL-109_125b 855 chr2L 14849241 14849282 chr2L 14849381 14849422 13 140 20.5 10.0 15.2 0.8 181 chr2L 14849241 intron CG15279 - chr2L 14849332 intron CG15279 - chr2L 14849422 intron CG15279 - chr2L_13_14845001 chr2L_14845001 RAL-109_125b 856 chr2L 14866924 14866986 chr2L 14867048 14867126 10 139 17.0 16.5 16.8 0.6 202 chr2L 14866924 intergenic not near genes chr2L 14867025 intergenic not near genes chr2L 14867126 intergenic not near genes chr2L_10_14865001 chr2L_14865001 RAL-109_125b 857 chr2L 14888475 14888490 chr2L 14888619 14888634 4 143 13.0 18.5 15.8 0.2 159 chr2L 14888475 intergenic not near genes chr2L 14888554 intergenic not near genes chr2L 14888634 intergenic not near genes chr2L_4_14885001 chr2L_14885001 RAL-109_125b 858 chr2L 14889909 14889970 chr2L 14890384 14890445 jockey 22 474 5.0 5.0 5.0 3.7 536 chr2L 14889909 intergenic not near genes chr2L 14890177 intergenic not near genes chr2L 14890445 intergenic not near genes chr2L_22_14890001 chr2L_14890001 RAL-109_125b 859 chr2L 14905697 14905734 chr2L 14905844 14905881 10 147 2.0 3.0 2.5 2.9 184 chr2L 14905697 intergenic not near genes chr2L 14905789 intergenic not near genes chr2L 14905881 intergenic not near genes chr2L_10_14905001 chr2L_14905001 RAL-109_125b 860 chr2L 14920094 14920153 chr2L 14920884 14920948 6 796 45.0 37.5 41.2 0.1 854 chr2L 14920094 intron CG42313 - chr2L 14920521 intron CG42313 - chr2L 14920948 intron CG42313 - chr2L_6_14920001 chr2L_14920001 RAL-109_125b 861 chr2L 14984339 14984401 chr2L 14991991 14992053 opus 18 7649 8.5 7.0 7.8 2.0 7714 chr2L 14984339 intron mol - chr2L 14988196 intron mol - chr2L 14992053 intron mol - chr2L_18_14985001 chr2L_14985001 RAL-109_125b 862 chr2L 15000179 15000210 chr2L 15000307 15000338 6 128 21.5 18.5 20.0 0.3 159 chr2L 15000179 intergenic not near genes chr2L 15000258 intergenic not near genes chr2L 15000338 intergenic not near genes chr2L_6_15000001 chr2L_15000001 RAL-109_125b 863 chr2L 15003496 15003569 chr2L 15003630 15003703 34 133 7.0 5.0 6.0 4.9 207 chr2L 15003496 intergenic not near genes chr2L 15003600 intergenic not near genes chr2L 15003703 intergenic not near genes chr2L_34_15000001 chr2L_15000001 RAL-109_125b 864 chr2L 15013102 15013178 chr2L 15013256 15013278 23 152 5.5 5.5 5.5 3.5 176 chr2L 15013102 intergenic CR43856 - chr2L 15013190 intergenic not near genes chr2L 15013278 intergenic not near genes chr2L_23_15010001 chr2L_15010001 RAL-109_125b 865 chr2L 15014599 15014653 chr2L 15014706 15014782 7 121 0.0 6.0 3.0 1.8 183 chr2L 15014599 intergenic not near genes chr2L 15014690 intergenic not near genes chr2L 15014782 intergenic not near genes chr2L_7_15010001 chr2L_15010001 RAL-109_125b 866 chr2L 15031528 15031585 chr2L 15031796 15031875 9 286 22.5 18.5 20.5 0.4 347 chr2L 15031528 intron,exon GABA-B-R1 +,CG31832 - chr2L 15031702 intron,exon GABA-B-R1 +,CG31832 - chr2L 15031875 intron GABA-B-R1 + chr2L_9_15030001 chr2L_15030001 RAL-109_125b 867 chr2L 15044668 15044724 chr2L 15044794 15044856 10 127 15.0 10.5 12.8 0.7 188 chr2L 15044668 intergenic ck - chr2L 15044762 intergenic ck - chr2L 15044856 intergenic ck - chr2L_10_15040001 chr2L_15040001 RAL-109_125b 868 chr2L 15053121 15053125 chr2L 15053243 15053252 5 126 16.5 18.5 17.5 0.3 131 chr2L 15053121 intron ck - chr2L 15053186 intron ck - chr2L 15053252 intron ck - chr2L_5_15050001 chr2L_15050001 RAL-109_125b 869 chr2L 15072289 15072327 chr2L 15072431 15072439 10 137 10.5 11.5 11.0 0.8 150 chr2L 15072289 intron vas + chr2L 15072364 exon vas + chr2L 15072439 exon vas + chr2L_10_15070001 chr2L_15070001 RAL-109_125b 870 chr2L 15078021 15078101 chr2L 15078159 15078213 32 135 5.5 4.0 4.8 5.5 192 chr2L 15078021 intron CG15270 + chr2L 15078117 intron CG15270 + chr2L 15078213 intron CG15270 + chr2L_32_15075001 chr2L_15075001 RAL-109_125b 871 chr2L 15080859 15080935 chr2L 15081002 15081081 16 146 26.0 27.0 26.5 0.6 222 chr2L 15080859 intron CG15270 + chr2L 15080970 intron CG15270 + chr2L 15081081 intron CG15270 + chr2L_16_15080001 chr2L_15080001 RAL-109_125b 872 chr2L 15082620 15082687 chr2L 15082764 15082830 9 141 20.5 20.0 20.2 0.4 210 chr2L 15082620 intron CG15270 + chr2L 15082725 intron CG15270 + chr2L 15082830 intron CG15270 + chr2L_9_15080001 chr2L_15080001 RAL-109_125b 873 chr2L 15098490 15098539 chr2L 15098620 15098668 20 126 13.5 2.0 7.8 2.3 178 chr2L 15098490 intergenic not near genes chr2L 15098579 intergenic not near genes chr2L 15098668 intergenic not near genes chr2L_20_15095001 chr2L_15095001 RAL-109_125b 874 chr2L 15103828 15103860 chr2L 15103975 15104007 8 147 12.5 12.5 12.5 0.6 179 chr2L 15103828 intergenic not near genes chr2L 15103918 intergenic not near genes chr2L 15104007 intergenic not near genes chr2L_8_15100001 chr2L_15100001 RAL-109_125b 875 chr2L 15108455 15108519 chr2L 15108648 15108711 8 193 8.0 20.0 14.0 0.5 256 chr2L 15108455 intergenic not near genes chr2L 15108583 intergenic not near genes chr2L 15108711 intergenic not near genes chr2L_8_15105001 chr2L_15105001 RAL-109_125b 876 chr2L 15122724 15122801 chr2L 15122854 15122932 7 130 11.0 9.5 10.2 0.6 208 chr2L 15122724 intergenic not near genes chr2L 15122828 intergenic not near genes chr2L 15122932 intergenic not near genes chr2L_7_15120001 chr2L_15120001 RAL-109_125b 877 chr2L 15130275 15130344 chr2L 15130409 15130459 8 132 15.5 15.5 15.5 0.5 184 chr2L 15130275 intergenic CR43854 + chr2L 15130367 intergenic CR43854 + chr2L 15130459 intergenic CR43854 + chr2L_8_15130001 chr2L_15130001 RAL-109_125b 878 chr2L 15138737 15138770 chr2L 15138859 15138903 10 127 24.5 22.5 23.5 0.4 166 chr2L 15138737 intergenic not near genes chr2L 15138820 intergenic not near genes chr2L 15138903 intergenic not near genes chr2L_10_15135001 chr2L_15135001 RAL-109_125b 879 chr2L 15141047 15141122 chr2L 15141272 15141351 7 217 5.0 12.0 8.5 0.7 304 chr2L 15141047 intergenic not near genes chr2L 15141199 intergenic not near genes chr2L 15141351 intergenic not near genes chr2L_7_15140001 chr2L_15140001 RAL-109_125b 880 chr2L 15163907 15163930 chr2L 15164034 15164056 10 127 2.0 7.0 4.5 1.8 149 chr2L 15163907 intron CG4168 - chr2L 15163982 intron CG4168 - chr2L 15164056 intron CG4168 - chr2L_10_15160001 chr2L_15160001 RAL-109_125b 881 chr2L 15197476 15197493 chr2L 15197622 15197639 INE-1 4 146 0.5 18.5 9.5 0.4 163 chr2L 15197476 intron CG4168 - chr2L 15197558 intron CG4168 - chr2L 15197639 intron CG4168 - chr2L_4_15195001 chr2L_15195001 RAL-109_125b 882 chr2L 15226338 15226378 chr2L 15226450 15226504 8 124 16.0 9.5 12.8 0.6 166 chr2L 15226338 intergenic not near genes chr2L 15226421 intergenic not near genes chr2L 15226504 intergenic not near genes chr2L_8_15225001 chr2L_15225001 RAL-109_125b 883 chr2L 15227693 15227729 chr2L 15227792 15227830 7 105 12.5 16.0 14.2 0.5 137 chr2L 15227693 intergenic not near genes chr2L 15227762 intergenic not near genes chr2L 15227830 intergenic not near genes chr2L_7_15225001 chr2L_15225001 RAL-109_125b 884 chr2L 15285300 15285324 chr2L 15285504 15285528 8 206 23.5 22.0 22.8 0.3 228 chr2L 15285300 exon CG15263 + chr2L 15285414 exon CG15263 + chr2L 15285528 exon CG15263 + chr2L_8_15285001 chr2L_15285001 RAL-109_125b 885 chr2L 15346579 15346643 chr2L 15346772 15346839 10 192 16.0 10.0 13.0 0.7 260 chr2L 15346579 intergenic not near genes chr2L 15346709 intergenic not near genes chr2L 15346839 intergenic not near genes chr2L_10_15345001 chr2L_15345001 RAL-109_125b 886 chr2L 15446002 15446077 chr2L 15453521 15453596 blood 18 7517 4.5 3.0 3.8 3.8 7594 chr2L 15446002 intergenic not near genes chr2L 15449799 intergenic not near genes chr2L 15453596 intergenic not near genes chr2L_18_15445001 chr2L_15445001 RAL-109_125b 887 chr2L 15510891 15510953 chr2L 15511035 15511097 12 141 17.5 19.0 18.2 0.6 206 chr2L 15510891 intergenic not near genes chr2L 15510994 intergenic not near genes chr2L 15511097 intergenic not near genes chr2L_12_15510001 chr2L_15510001 RAL-109_125b 888 chr2L 15514288 15514326 chr2L 15514412 15514460 9 131 21.0 23.0 22.0 0.4 172 chr2L 15514288 intergenic not near genes chr2L 15514374 intergenic not near genes chr2L 15514460 intergenic not near genes chr2L_9_15510001 chr2L_15510001 RAL-109_125b 889 chr2L 15527418 15527440 chr2L 15527546 15527568 4 128 7.0 14.5 10.8 0.3 150 chr2L 15527418 intergenic not near genes chr2L 15527493 intergenic not near genes chr2L 15527568 intergenic not near genes chr2L_4_15525001 chr2L_15525001 RAL-109_125b 890 chr2L 15540831 15540853 chr2L 15540984 15541007 8 154 14.5 20.5 17.5 0.4 176 chr2L 15540831 intergenic not near genes chr2L 15540919 intergenic not near genes chr2L 15541007 intergenic not near genes chr2L_8_15540001 chr2L_15540001 RAL-109_125b 891 chr2L 15567345 15567360 chr2L 15567483 15567498 4 138 7.0 6.0 6.5 0.5 153 chr2L 15567345 intron kek3 + chr2L 15567422 intron kek3 + chr2L 15567498 intron kek3 + chr2L_4_15565001 chr2L_15565001 RAL-109_125b 892 chr2L 15586377 15586435 chr2L 15593466 15593536 297 12 7099 5.0 8.0 6.5 1.6 7159 chr2L 15586377 intergenic not near genes chr2L 15589956 intergenic not near genes chr2L 15593536 intergenic not near genes chr2L_12_15585001 chr2L_15585001 RAL-109_125b 893 chr2L 15598711 15598788 chr2L 15598847 15598924 19 136 5.0 0.0 2.5 5.4 213 chr2L 15598711 intergenic not near genes chr2L 15598818 intergenic not near genes chr2L 15598924 intergenic not near genes chr2L_19_15595001 chr2L_15595001 RAL-109_125b 894 chr2L 15619367 15619389 chr2L 15619563 15619585 6 196 8.5 10.0 9.2 0.6 218 chr2L 15619367 intergenic not near genes chr2L 15619476 intergenic not near genes chr2L 15619585 intergenic not near genes chr2L_6_15615001 chr2L_15615001 RAL-109_125b 895 chr2L 15624902 15624966 chr2L 15625031 15625111 11 139 16.5 16.5 16.5 0.6 209 chr2L 15624902 intergenic not near genes chr2L 15625006 intergenic not near genes chr2L 15625111 intergenic not near genes chr2L_11_15625001 chr2L_15625001 RAL-109_125b 896 chr2L 15636625 15636694 chr2L 15636751 15636821 14 125 10.5 12.0 11.2 1.1 196 chr2L 15636625 intergenic not near genes chr2L 15636723 intergenic not near genes chr2L 15636821 intergenic not near genes chr2L_14_15635001 chr2L_15635001 RAL-109_125b 897 chr2L 15642905 15642982 chr2L 15643040 15643113 10 135 12.0 13.0 12.5 0.7 208 chr2L 15642905 intergenic not near genes chr2L 15643009 intergenic not near genes chr2L 15643113 intergenic not near genes chr2L_10_15640001 chr2L_15640001 RAL-109_125b 898 chr2L 15749976 15750266 chr2L 15750139 15750400 4 156 8.5 13.0 10.8 0.3 424 chr2L 15749976 intron l(2)35Di - chr2L 15750188 intron l(2)35Di - chr2L 15750400 intron l(2)35Di - chr2L_4_15750001 chr2L_15750001 RAL-109_125b 899 chr2L 15775383 15775417 chr2L 15775514 15775548 6 131 16.5 21.5 19.0 0.3 165 chr2L 15775383 intergenic not near genes chr2L 15775466 intergenic not near genes chr2L 15775548 intergenic not near genes chr2L_6_15775001 chr2L_15775001 RAL-109_125b 900 chr2L 15805591 15805612 chr2L 15805739 15805760 5 148 4.0 8.0 6.0 0.7 169 chr2L 15805591 intergenic not near genes chr2L 15805676 intergenic not near genes chr2L 15805760 intergenic not near genes chr2L_5_15805001 chr2L_15805001 RAL-109_125b 901 chr2L 15821007 15821064 chr2L 15821151 15821214 7 146 0.0 0.0 0.0 7.0 207 chr2L 15821007 intergenic not near genes chr2L 15821110 intergenic not near genes chr2L 15821214 intergenic not near genes chr2L_7_15820001 chr2L_15820001 RAL-109_125b 902 chr2L 15826848 15826891 chr2L 15829292 15829335 Tabor 12 2444 2.5 11.0 6.8 1.5 2487 chr2L 15826848 intergenic not near genes chr2L 15828092 intergenic not near genes chr2L 15829335 intergenic not near genes chr2L_12_15825001 chr2L_15825001 RAL-109_125b 903 chr2L 15852040 15852063 chr2L 15852146 15852197 7 126 17.5 17.5 17.5 0.4 157 chr2L 15852040 intergenic not near genes chr2L 15852118 intergenic CG13243 + chr2L 15852197 intergenic CG13243 + chr2L_7_15850001 chr2L_15850001 RAL-109_125b 904 chr2L 15852064 15852073 chr2L 15852138 15852207 6 122 18.0 16.5 17.2 0.3 143 chr2L 15852064 intergenic not near genes chr2L 15852136 intergenic CG13243 + chr2L 15852207 intergenic CG13243 + chr2L_6_15850001 chr2L_15850001 RAL-109_125b 905 chr2L 15894641 15894657 chr2L 15894841 15894857 5 200 14.5 17.5 16.0 0.3 216 chr2L 15894641 intergenic not near genes chr2L 15894749 intergenic not near genes chr2L 15894857 intergenic not near genes chr2L_5_15890001 chr2L_15890001 RAL-109_125b 906 chr2L 15913614 15913645 chr2L 15913719 15913775 11 123 21.5 20.5 21.0 0.5 161 chr2L 15913614 intron beat-Ib - chr2L 15913694 intron beat-Ib - chr2L 15913775 intron beat-Ib - chr2L_11_15910001 chr2L_15910001 RAL-109_125b 907 chr2L 15913648 15913657 chr2L 15913713 15913772 4 102 19.5 21.5 20.5 0.2 124 chr2L 15913648 intron beat-Ib - chr2L 15913710 intron beat-Ib - chr2L 15913772 intron beat-Ib - chr2L_4_15910001 chr2L_15910001 RAL-109_125b 908 chr2L 15915633 15915663 chr2L 15915736 15915784 7 123 22.5 22.0 22.2 0.3 151 chr2L 15915633 intron beat-Ib - chr2L 15915708 intron beat-Ib - chr2L 15915784 intron beat-Ib - chr2L_7_15915001 chr2L_15915001 RAL-109_125b 909 chr2L 15954148 15954203 chr2L 15954277 15954334 13 126 12.0 9.5 10.8 1.1 186 chr2L 15954148 intron beat-Ib - chr2L 15954241 intron beat-Ib - chr2L 15954334 intron beat-Ib - chr2L_13_15950001 chr2L_15950001 RAL-109_125b 910 chr2L 15955984 15956049 chr2L 15957501 15957566 hobo 23 1515 12.0 8.5 10.2 2.1 1582 chr2L 15955984 intron beat-Ib - chr2L 15956775 intron beat-Ib - chr2L 15957566 intron beat-Ib - chr2L_23_15955001 chr2L_15955001 RAL-109_125b 911 chr2L 16008657 16008668 chr2L 16008808 16008819 5 151 2.0 4.5 3.2 1.2 162 chr2L 16008657 intron beat-Ic + chr2L 16008738 intron beat-Ic + chr2L 16008819 intron beat-Ic + chr2L_5_16005001 chr2L_16005001 RAL-109_125b 912 chr2L 8578452 8578453 chr2L 16071771 16071771 6 7493319 36.5 24.5 30.5 0.2 7493319 chr2L 8578452 intron Sema-1a + chr2L 12325112 intergenic not near genes chr2L 16071771 intron beat-Ia + chr2L_6_12325001 chr2L_12325001 RAL-109_125b 913 chr2L 10176023 10176025 chr2L 16071771 16071771 6 5895747 32.0 24.5 28.2 0.2 5895748 chr2L 10176023 intron CG44153 - chr2L 13123897 intergenic not near genes chr2L 16071771 intron beat-Ia + chr2L_6_13120001 chr2L_13120001 RAL-109_125b 914 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 47 145889 23.5 35.0 29.2 1.6 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_47_16140001 chr2L_16140001 RAL-109_125b 915 chr2L 16106506 16106573 chr2L 16106674 16106741 11 164 18.5 16.0 17.2 0.6 235 chr2L 16106506 intergenic not near genes chr2L 16106624 intergenic not near genes chr2L 16106741 intergenic not near genes chr2L_11_16105001 chr2L_16105001 RAL-109_125b 916 chr2L 16121718 16121768 chr2L 16121886 16121938 4 173 18.0 14.0 16.0 0.2 220 chr2L 16121718 intergenic not near genes chr2L 16121828 intergenic not near genes chr2L 16121938 intergenic not near genes chr2L_4_16120001 chr2L_16120001 RAL-109_125b 917 chr2L 16141102 16141194 chr2L 16146373 16146457 copia 11 5264 3.0 7.0 5.0 1.8 5355 chr2L 16141102 intergenic not near genes chr2L 16143780 intergenic not near genes chr2L 16146457 intergenic not near genes chr2L_11_16140001 chr2L_16140001 RAL-109_125b 918 chr2L 16153694 16153761 chr2L 16160812 16160879 297 18 7114 7.0 6.5 6.8 2.3 7185 chr2L 16153694 intergenic not near genes chr2L 16157286 intergenic not near genes chr2L 16160879 intergenic not near genes chr2L_18_16155001 chr2L_16155001 RAL-109_125b 919 chr2L 16197185 16197227 chr2L 16197284 16197356 15 125 21.0 22.5 21.8 0.7 171 chr2L 16197185 intergenic not near genes chr2L 16197270 intergenic not near genes chr2L 16197356 intergenic not near genes chr2L_15_16195001 chr2L_16195001 RAL-109_125b 920 chr2L 16203316 16203372 chr2L 16203459 16203515 11 143 20.5 18.5 19.5 0.5 199 chr2L 16203316 5` UTR CR44736 + chr2L 16203416 5` UTR CR44736 + chr2L 16203515 intergenic CR44736 + chr2L_11_16200001 chr2L_16200001 RAL-109_125b 921 chr2L 16207022 16207090 chr2L 16207149 16207216 12 126 16.5 22.0 19.2 0.6 194 chr2L 16207022 intergenic not near genes chr2L 16207119 intergenic not near genes chr2L 16207216 intergenic not near genes chr2L_12_16205001 chr2L_16205001 RAL-109_125b 922 chr2L 9084336 9084340 chr2L 16217660 16217660 11 7133321 34.5 35.0 34.8 0.3 7133324 chr2L 9084336 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_11_12650001 chr2L_12650001 RAL-109_125b 923 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 39 145889 23.5 35.0 29.2 1.3 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_39_16140001 chr2L_16140001 RAL-109_125b 924 chr2L 16217660 16217660 chr2L 18622718 18622719 5 2405059 28.0 34.0 31.0 0.2 2405059 chr2L 16217660 intergenic not near genes chr2L 17420190 intron Dif - chr2L 18622719 intron MESR3 + chr2L_5_17420001 chr2L_17420001 RAL-109_125b 925 chr2L 16243171 16243368 chr2L 16243298 16243498 33 128 15.0 16.0 15.5 2.0 327 chr2L 16243171 exon CG42818 + chr2L 16243334 exon CG42818 + chr2L 16243498 exon CG42818 + chr2L_33_16240001 chr2L_16240001 RAL-109_125b 926 chr2L 16243643 16243706 chr2L 16243776 16243839 13 129 23.0 21.0 22.0 0.6 196 chr2L 16243643 exon CG42818 + chr2L 16243741 exon CG42818 + chr2L 16243839 exon CG42818 + chr2L_13_16240001 chr2L_16240001 RAL-109_125b 927 chr2L 16254846 16254915 chr2L 16255155 16255224 15 308 24.0 27.5 25.8 0.6 378 chr2L 16254846 intron PRL-1 - chr2L 16255035 intron PRL-1 - chr2L 16255224 intron PRL-1 - chr2L_15_16255001 chr2L_16255001 RAL-109_125b 928 chr2L 16280244 16280272 chr2L 16281427 16281460 1360 9 1201 11.0 8.5 9.8 0.8 1216 chr2L 16280244 intron crp - chr2L 16280852 intron crp - chr2L 16281460 intron crp - chr2L_9_16280001 chr2L_16280001 RAL-109_125b 929 chr2L 16309625 16309661 chr2L 16309758 16309794 11 133 27.0 26.0 26.5 0.4 169 chr2L 16309625 3` UTR cni - chr2L 16309710 3` UTR cni - chr2L 16309794 3` UTR cni - chr2L_11_16305001 chr2L_16305001 RAL-109_125b 930 chr2L 16354726 16354784 chr2L 16354867 16354926 7 142 22.0 20.0 21.0 0.3 200 chr2L 16354726 intergenic CaBP1 -,CG4455 + chr2L 16354826 intergenic CaBP1 -,CG4455 + chr2L 16354926 3` UTR CaBP1 - chr2L_7_16350001 chr2L_16350001 RAL-109_125b 931 chr2L 16363921 16363972 chr2L 16364217 16364268 12 294 14.5 24.5 19.5 0.6 347 chr2L 16363921 intergenic not near genes chr2L 16364094 intergenic not near genes chr2L 16364268 intergenic not near genes chr2L_12_16360001 chr2L_16360001 RAL-109_125b 932 chr2L 16384456 16384517 chr2L 16384595 16384656 12 138 17.5 22.5 20.0 0.6 200 chr2L 16384456 intergenic not near genes chr2L 16384556 intergenic not near genes chr2L 16384656 intergenic not near genes chr2L_12_16380001 chr2L_16380001 RAL-109_125b 933 chr2L 16390081 16390137 chr2L 16390256 16390276 10 168 20.5 14.5 17.5 0.5 195 chr2L 16390081 intergenic not near genes chr2L 16390178 intergenic not near genes chr2L 16390276 intergenic not near genes chr2L_10_16390001 chr2L_16390001 RAL-109_125b 934 chr2L 16434066 16434117 chr2L 16434198 16434249 6 132 15.5 14.5 15.0 0.4 183 chr2L 16434066 intron CG5888 - chr2L 16434158 intron CG5888 - chr2L 16434249 intron CG5888 - chr2L_6_16430001 chr2L_16430001 RAL-109_125b 935 chr2L 16487848 16487923 chr2L 16488008 16488076 9 159 17.0 19.0 18.0 0.5 228 chr2L 16487848 intergenic CG4580 + chr2L 16487962 intergenic CG4580 + chr2L 16488076 intergenic CG4580 + chr2L_9_16485001 chr2L_16485001 RAL-109_125b 936 chr2L 16504058 16504108 chr2L 16504340 16504391 8 283 16.0 17.5 16.8 0.4 333 chr2L 16504058 intron Tpr2 + chr2L 16504224 intron Tpr2 + chr2L 16504391 intron Tpr2 + chr2L_8_16500001 chr2L_16500001 RAL-109_125b 937 chr2L 16511918 16511980 chr2L 16519082 16519144 HMS-Beagle 24 7164 8.5 7.0 7.8 2.7 7226 chr2L 16511918 intron CG5953 - chr2L 16515531 intron CG5953 - chr2L 16519144 intron CG5953 - chr2L_24_16515001 chr2L_16515001 RAL-109_125b 938 chr2L 16595658 16595735 chr2L 16596032 16596109 12 369 13.5 18.0 15.8 0.7 451 chr2L 16595658 intron CG42389 + chr2L 16595884 intron CG42389 + chr2L 16596109 intron CG42389 + chr2L_12_16595001 chr2L_16595001 RAL-109_125b 939 chr2L 16600208 16600255 chr2L 16600353 16600400 7 145 28.5 19.0 23.8 0.3 192 chr2L 16600208 intron CG42389 + chr2L 16600304 intron CG42389 + chr2L 16600400 intron CG42389 + chr2L_7_16600001 chr2L_16600001 RAL-109_125b 940 chr2L 16693912 16693940 chr2L 16694007 16694071 7 126 21.0 24.0 22.5 0.3 159 chr2L 16693912 intron grp + chr2L 16693992 intron grp + chr2L 16694071 intron grp + chr2L_7_16690001 chr2L_16690001 RAL-109_125b 941 chr2L 16697020 16697043 chr2L 16697263 16697286 8 243 23.5 16.0 19.8 0.4 266 chr2L 16697020 intron grp + chr2L 16697153 intron grp + chr2L 16697286 intron grp + chr2L_8_16695001 chr2L_16695001 RAL-109_125b 942 chr2L 16709029 16709103 chr2L 16709163 16709237 14 134 25.0 26.0 25.5 0.5 208 chr2L 16709029 intron CG31808 - chr2L 16709133 intron CG31808 - chr2L 16709237 intron CG31808 - chr2L_14_16705001 chr2L_16705001 RAL-109_125b 943 chr2L 16721419 16721452 chr2L 16721554 16721589 6 140 15.5 16.5 16.0 0.4 170 chr2L 16721419 intron Cyt-c-p + chr2L 16721504 intron Cyt-c-p + chr2L 16721589 intron Cyt-c-p + chr2L_6_16720001 chr2L_16720001 RAL-109_125b 944 chr2L 16722547 16722568 chr2L 16722683 16722703 8 136 22.0 15.0 18.5 0.4 156 chr2L 16722547 3` UTR Cyt-c-p + chr2L 16722625 3` UTR Cyt-c-p + chr2L 16722703 intergenic Cyt-c-p +,VhaSFD - chr2L_8_16720001 chr2L_16720001 RAL-109_125b 945 chr2L 16764926 16764995 chr2L 16765055 16765099 19 127 5.0 7.0 6.0 2.7 173 chr2L 16764926 intergenic not near genes chr2L 16765012 intergenic not near genes chr2L 16765099 intergenic not near genes chr2L_19_16765001 chr2L_16765001 RAL-109_125b 946 chr2L 16791190 16791236 chr2L 16791325 16791372 14 136 20.5 20.0 20.2 0.7 182 chr2L 16791190 intergenic CG17928 +,Cyt-b5-r - chr2L 16791281 intergenic CG17928 + chr2L 16791372 intergenic CG17928 + chr2L_14_16790001 chr2L_16790001 RAL-109_125b 947 chr2L 16796068 16796094 chr2L 16796219 16796234 4 148 10.5 23.5 17.0 0.2 166 chr2L 16796068 intergenic Ugt36Ba + chr2L 16796151 intergenic Ugt36Ba +,Ugt36Bb + chr2L 16796234 intergenic Ugt36Ba +,Ugt36Bb + chr2L_4_16795001 chr2L_16795001 RAL-109_125b 948 chr2L 16818745 16818784 chr2L 16818879 16818901 10 139 25.5 21.0 23.2 0.4 156 chr2L 16818745 intron,intron CG13280 -,mdy + chr2L 16818823 intron,intron CG13280 -,mdy + chr2L 16818901 intron,intron CG13280 -,mdy + chr2L_10_16815001 chr2L_16815001 RAL-109_125b 949 chr2L 16852737 16852805 chr2L 16859928 16859961 Doc4-element 5 7184 19.5 14.5 17.0 0.3 7224 chr2L 16852737 intergenic CG31810 - chr2L 16856349 intron CG31809 - chr2L 16859961 intergenic CG6012 - chr2L_5_16855001 chr2L_16855001 RAL-109_125b 950 chr2L 16866997 16867036 chr2L 16867127 16867181 6 142 7.0 11.0 9.0 0.6 184 chr2L 16866997 intergenic not near genes chr2L 16867089 intergenic not near genes chr2L 16867181 intergenic not near genes chr2L_6_16865001 chr2L_16865001 RAL-109_125b 951 chr2L 16880816 16880843 chr2L 16880948 16880975 18 130 9.5 14.0 11.8 1.4 159 chr2L 16880816 intron,intron CG31743 +,CG34313 + chr2L 16880896 intron,intron CG31743 +,CG34313 + chr2L 16880975 intron,intron CG31743 +,CG34313 + chr2L_18_16880001 chr2L_16880001 RAL-109_125b 952 chr2L 16949603 16949612 chr2L 16949737 16949746 5 134 22.0 14.5 18.2 0.3 143 chr2L 16949603 intron CR44393 - chr2L 16949674 intron CR44393 - chr2L 16949746 intron CR44393 - chr2L_5_16945001 chr2L_16945001 RAL-109_125b 953 chr2L 16952640 16952688 chr2L 16952799 16952847 7 155 5.0 4.5 4.8 1.2 207 chr2L 16952640 intergenic not near genes chr2L 16952744 intergenic not near genes chr2L 16952847 intergenic not near genes chr2L_7_16950001 chr2L_16950001 RAL-109_125b 954 chr2L 16958072 16958125 chr2L 16962910 16962963 Doc 19 4838 4.0 8.0 6.0 2.7 4891 chr2L 16958072 intergenic not near genes chr2L 16960518 intergenic not near genes chr2L 16962963 intergenic not near genes chr2L_19_16960001 chr2L_16960001 RAL-109_125b 955 chr2L 16968197 16968256 chr2L 16968336 16968396 7 140 19.5 17.0 18.2 0.4 199 chr2L 16968197 intergenic not near genes chr2L 16968296 intergenic not near genes chr2L 16968396 intergenic not near genes chr2L_7_16965001 chr2L_16965001 RAL-109_125b 956 chr2L 16987516 16987573 chr2L 16987642 16987699 10 122 19.5 21.0 20.2 0.5 183 chr2L 16987516 intron beat-IIIb + chr2L 16987608 intron beat-IIIb + chr2L 16987699 intron beat-IIIb + chr2L_10_16985001 chr2L_16985001 RAL-109_125b 957 chr2L 17000079 17000140 chr2L 17000251 17000296 11 170 8.0 8.5 8.2 1.2 217 chr2L 17000079 intergenic not near genes chr2L 17000188 intergenic not near genes chr2L 17000296 intergenic not near genes chr2L_11_17000001 chr2L_17000001 RAL-109_125b 958 chr2L 17032453 17032512 chr2L 17032588 17032647 21 133 7.0 7.0 7.0 2.6 194 chr2L 17032453 intergenic not near genes chr2L 17032550 intergenic not near genes chr2L 17032647 intergenic not near genes chr2L_21_17030001 chr2L_17030001 RAL-109_125b 959 chr2L 17053239 17053300 chr2L 17053699 17053760 8 459 9.5 12.5 11.0 0.7 521 chr2L 17053239 intergenic not near genes chr2L 17053500 intergenic not near genes chr2L 17053760 intergenic not near genes chr2L_8_17050001 chr2L_17050001 RAL-109_125b 960 chr2L 17058397 17058423 chr2L 17058600 17058626 4 203 12.0 7.0 9.5 0.4 229 chr2L 17058397 intergenic not near genes chr2L 17058512 intergenic not near genes chr2L 17058626 intergenic not near genes chr2L_4_17055001 chr2L_17055001 RAL-109_125b 961 chr2L 17062726 17062761 chr2L 17062858 17062886 5 130 12.0 12.0 12.0 0.4 160 chr2L 17062726 intergenic not near genes chr2L 17062806 intergenic not near genes chr2L 17062886 intergenic not near genes chr2L_5_17060001 chr2L_17060001 RAL-109_125b 962 chr2L 17070154 17070209 chr2L 17070300 17070355 7 146 21.0 13.0 17.0 0.4 201 chr2L 17070154 intergenic not near genes chr2L 17070254 intergenic not near genes chr2L 17070355 intergenic not near genes chr2L_7_17070001 chr2L_17070001 RAL-109_125b 963 chr2L 17087348 17087397 chr2L 17087516 17087565 7 164 12.5 14.5 13.5 0.5 217 chr2L 17087348 intergenic CG12620 + chr2L 17087456 intergenic CG12620 + chr2L 17087565 intergenic CG12620 + chr2L_7_17085001 chr2L_17085001 RAL-109_125b 964 chr2L 17088801 17088866 chr2L 17088935 17089000 9 130 20.0 24.0 22.0 0.4 199 chr2L 17088801 3` UTR CG12620 + chr2L 17088900 3` UTR CG12620 + chr2L 17089000 3` UTR CG12620 + chr2L_9_17085001 chr2L_17085001 RAL-109_125b 965 chr2L 17101851 17101913 chr2L 17101978 17102040 14 127 14.0 11.0 12.5 1.0 189 chr2L 17101851 intergenic not near genes chr2L 17101946 intergenic not near genes chr2L 17102040 intergenic not near genes chr2L_14_17100001 chr2L_17100001 RAL-109_125b 966 chr2L 17118663 17118713 chr2L 17118784 17118850 8 131 8.0 13.0 10.5 0.7 187 chr2L 17118663 intergenic not near genes chr2L 17118756 intergenic not near genes chr2L 17118850 intergenic not near genes chr2L_8_17115001 chr2L_17115001 RAL-109_125b 967 chr2L 17122746 17122801 chr2L 17122871 17122936 10 126 13.0 14.0 13.5 0.7 190 chr2L 17122746 intergenic not near genes chr2L 17122841 intergenic CG31784 - chr2L 17122936 intergenic CG31784 - chr2L_10_17120001 chr2L_17120001 RAL-109_125b 968 chr2L 17158683 17158735 chr2L 17158836 17158873 7 148 17.0 12.5 14.8 0.4 190 chr2L 17158683 5` UTR,exon CG34106 +,beat-IIIa + chr2L 17158778 intron,intron CG34106 +,beat-IIIa + chr2L 17158873 intron,intron CG34106 +,beat-IIIa + chr2L_7_17155001 chr2L_17155001 RAL-109_125b 969 chr2L 17167524 17167591 chr2L 17167815 17167866 pogo 14 287 6.5 8.5 7.5 1.6 342 chr2L 17167524 intron,intron CG34106 +,beat-IIIa + chr2L 17167695 intron,intron CG34106 +,beat-IIIa + chr2L 17167866 intron,intron CG34106 +,beat-IIIa + chr2L_14_17165001 chr2L_17165001 RAL-109_125b 970 chr2L 17181406 17181467 chr2L 17181540 17181601 10 134 15.0 15.5 15.2 0.6 195 chr2L 17181406 exon Gr36c + chr2L 17181504 exon Gr36c + chr2L 17181601 exon Gr36c + chr2L_10_17180001 chr2L_17180001 RAL-109_125b 971 chr2L 17199121 17199178 chr2L 17200638 17200696 hobo 15 1516 10.0 5.0 7.5 1.8 1575 chr2L 17199121 intron beat-IIIc - chr2L 17199908 intron beat-IIIc - chr2L 17200696 intron beat-IIIc - chr2L_15_17195001 chr2L_17195001 RAL-109_125b 972 chr2L 17226065 17226111 chr2L 17226194 17226238 5 128 13.5 14.5 14.0 0.3 173 chr2L 17226065 intron beat-IIIc - chr2L 17226152 intron beat-IIIc - chr2L 17226238 intron beat-IIIc - chr2L_5_17225001 chr2L_17225001 RAL-109_125b 973 chr2L 17226694 17226729 chr2L 17226826 17226861 6 132 19.0 16.0 17.5 0.3 167 chr2L 17226694 intron beat-IIIc - chr2L 17226778 intron beat-IIIc - chr2L 17226861 intron beat-IIIc - chr2L_6_17225001 chr2L_17225001 RAL-109_125b 974 chr2L 17234707 17234729 chr2L 17234835 17234850 4 140 11.0 12.5 11.8 0.3 143 chr2L 17234707 intron beat-IIIc - chr2L 17234778 intron beat-IIIc - chr2L 17234850 intron beat-IIIc - chr2L_4_17230001 chr2L_17230001 RAL-109_125b 975 chr2L 17264705 17264767 chr2L 17264835 17264897 19 130 7.0 3.5 5.2 3.1 192 chr2L 17264705 intergenic not near genes chr2L 17264801 intergenic not near genes chr2L 17264897 intergenic not near genes chr2L_19_17260001 chr2L_17260001 RAL-109_125b 976 chr2L 17273164 17273219 chr2L 17277983 17278038 F-element 20 4828 3.0 8.0 5.5 3.1 4874 chr2L 17273164 intergenic not near genes chr2L 17275601 intergenic not near genes chr2L 17278038 intergenic not near genes chr2L_20_17275001 chr2L_17275001 RAL-109_125b 977 chr2L 17292846 17292884 chr2L 17292970 17293012 8 126 18.5 18.0 18.2 0.4 166 chr2L 17292846 intergenic not near genes chr2L 17292929 intergenic not near genes chr2L 17293012 intergenic not near genes chr2L_8_17290001 chr2L_17290001 RAL-109_125b 978 chr2L 17292886 17292903 chr2L 17292964 17293031 4 93 18.5 18.0 18.2 0.2 145 chr2L 17292886 intergenic not near genes chr2L 17292958 intergenic not near genes chr2L 17293031 intergenic not near genes chr2L_4_17290001 chr2L_17290001 RAL-109_125b 979 chr2L 17294260 17294324 chr2L 17294555 17294582 6 269 12.0 8.5 10.2 0.5 322 chr2L 17294260 intergenic not near genes chr2L 17294421 intergenic not near genes chr2L 17294582 intergenic not near genes chr2L_6_17290001 chr2L_17290001 RAL-109_125b 980 chr2L 17304275 17304307 chr2L 17304412 17304444 11 136 13.0 17.5 15.2 0.7 169 chr2L 17304275 intergenic not near genes chr2L 17304360 intergenic not near genes chr2L 17304444 intergenic not near genes chr2L_11_17300001 chr2L_17300001 RAL-109_125b 981 chr2L 17319074 17319126 chr2L 17319199 17319245 5 119 12.5 13.5 13.0 0.4 171 chr2L 17319074 intergenic CR45696 - chr2L 17319160 3` UTR CR45696 - chr2L 17319245 3` UTR CR45696 - chr2L_5_17315001 chr2L_17315001 RAL-109_125b 982 chr2L 17327870 17327921 chr2L 17328005 17328052 10 135 20.5 17.0 18.8 0.5 182 chr2L 17327870 intergenic not near genes chr2L 17327961 intergenic not near genes chr2L 17328052 intergenic not near genes chr2L_10_17325001 chr2L_17325001 RAL-109_125b 983 chr2L 17359984 17360007 chr2L 17360212 17360235 5 228 23.0 9.5 16.2 0.3 251 chr2L 17359984 intergenic not near genes chr2L 17360110 intergenic not near genes chr2L 17360235 intergenic not near genes chr2L_5_17360001 chr2L_17360001 RAL-109_125b 984 chr2L 17379665 17379706 chr2L 17379799 17379841 12 135 19.0 21.0 20.0 0.6 176 chr2L 17379665 intron Lrch - chr2L 17379753 intron Lrch - chr2L 17379841 intron Lrch - chr2L_12_17375001 chr2L_17375001 RAL-109_125b 985 chr2L 17380409 17380477 chr2L 17380729 17380788 9 314 13.0 10.0 11.5 0.7 379 chr2L 17380409 intron Lrch - chr2L 17380598 intron Lrch - chr2L 17380788 intron Lrch - chr2L_9_17380001 chr2L_17380001 RAL-109_125b 986 chr2L 17388555 17388563 chr2L 17388681 17388689 4 126 1.0 0.0 0.5 2.7 134 chr2L 17388555 intron CLIP-190 + chr2L 17388622 intron CLIP-190 + chr2L 17388689 intron CLIP-190 + chr2L_4_17385001 chr2L_17385001 RAL-109_125b 987 chr2L 17425726 17425763 chr2L 17425903 17425940 6 173 13.0 12.0 12.5 0.4 214 chr2L 17425726 intron Dif - chr2L 17425833 intron Dif - chr2L 17425940 intron Dif - chr2L_6_17425001 chr2L_17425001 RAL-109_125b 988 chr2L 17432037 17432042 chr2L 17432194 17432199 1360 4 157 0.0 18.0 9.0 0.4 162 chr2L 17432037 intron Dif - chr2L 17432118 intron Dif - chr2L 17432199 intron Dif - chr2L_4_17430001 chr2L_17430001 RAL-109_125b 989 chr2L 17466377 17466448 chr2L 17466521 17466591 7 143 13.5 18.0 15.8 0.4 214 chr2L 17466377 intron BicD - chr2L 17466484 intron BicD - chr2L 17466591 intron BicD - chr2L_7_17465001 chr2L_17465001 RAL-109_125b 990 chr2L 17517806 17517879 chr2L 17517939 17518012 14 132 29.5 25.5 27.5 0.5 206 chr2L 17517806 intron Dhc36C + chr2L 17517909 intron Dhc36C + chr2L 17518012 intron Dhc36C + chr2L_14_17515001 chr2L_17515001 RAL-109_125b 991 chr2L 17571156 17571162 chr2L 17571254 17571295 6 127 16.5 20.0 18.2 0.3 139 chr2L 17571156 intergenic not near genes chr2L 17571226 intergenic not near genes chr2L 17571295 intergenic not near genes chr2L_6_17570001 chr2L_17570001 RAL-109_125b 992 chr2L 17578223 17578284 chr2L 17578418 17578449 12 186 19.0 16.0 17.5 0.6 226 chr2L 17578223 intergenic not near genes chr2L 17578336 intergenic not near genes chr2L 17578449 intergenic not near genes chr2L_12_17575001 chr2L_17575001 RAL-109_125b 993 chr2L 17605030 17605039 chr2L 17605162 17605171 4 132 18.5 19.0 18.8 0.2 141 chr2L 17605030 intergenic not near genes chr2L 17605100 intergenic not near genes chr2L 17605171 intergenic not near genes chr2L_4_17605001 chr2L_17605001 RAL-109_125b 994 chr2L 17613416 17613468 chr2L 17613663 17613715 8 246 8.0 12.5 10.2 0.7 299 chr2L 17613416 intergenic not near genes chr2L 17613566 intergenic not near genes chr2L 17613715 intergenic not near genes chr2L_8_17610001 chr2L_17610001 RAL-109_125b 995 chr2L 17650490 17650507 chr2L 17650617 17650634 4 126 17.0 7.0 12.0 0.3 144 chr2L 17650490 exon CadN - chr2L 17650562 intron CadN - chr2L 17650634 intron CadN - chr2L_4_17650001 chr2L_17650001 RAL-109_125b 996 chr2L 17669077 17669086 chr2L 17669195 17669213 5 123 17.0 17.5 17.2 0.3 136 chr2L 17669077 intron CadN - chr2L 17669145 intron CadN - chr2L 17669213 intron CadN - chr2L_5_17665001 chr2L_17665001 RAL-109_125b 997 chr2L 17669088 17669121 chr2L 17669191 17669248 5 114 15.5 17.5 16.5 0.3 160 chr2L 17669088 intron CadN - chr2L 17669168 intron CadN - chr2L 17669248 intron CadN - chr2L_5_17665001 chr2L_17665001 RAL-109_125b 998 chr2L 17687467 17687522 chr2L 17692262 17692317 F-element 18 4794 6.5 5.5 6.0 2.6 4850 chr2L 17687467 intron CadN - chr2L 17689892 intron CadN - chr2L 17692317 intron CadN - chr2L_18_17685001 chr2L_17685001 RAL-109_125b 999 chr2L 17723744 17723782 chr2L 17723887 17723925 7 143 19.0 18.0 18.5 0.4 181 chr2L 17723744 intron CadN - chr2L 17723834 intron CadN - chr2L 17723925 intron CadN - chr2L_7_17720001 chr2L_17720001 RAL-109_125b 1000 chr2L 17727818 17727870 chr2L 17729335 17729387 hobo 18 1515 11.0 11.0 11.0 1.5 1569 chr2L 17727818 intron CadN - chr2L 17728602 intron CadN - chr2L 17729387 intron CadN - chr2L_18_17725001 chr2L_17725001 RAL-109_125b 1001 chr2L 17785772 17785837 chr2L 17786525 17786590 6 748 17.5 18.0 17.8 0.3 818 chr2L 17785772 intergenic not near genes chr2L 17786181 intergenic not near genes chr2L 17786590 intergenic CadN2 - chr2L_6_17785001 chr2L_17785001 RAL-109_125b 1002 chr2L 17791587 17791645 chr2L 17791715 17791773 8 121 24.5 23.5 24.0 0.3 186 chr2L 17791587 intron CadN2 - chr2L 17791680 intron CadN2 - chr2L 17791773 intron CadN2 - chr2L_8_17790001 chr2L_17790001 RAL-109_125b 1003 chr2L 17813707 17813723 chr2L 17813840 17813856 6 133 19.0 12.5 15.8 0.4 149 chr2L 17813707 intron CadN2 - chr2L 17813782 intron CadN2 - chr2L 17813856 intron CadN2 - chr2L_6_17810001 chr2L_17810001 RAL-109_125b 1004 chr2L 17819880 17819943 chr2L 17825132 17825196 copia 30 5251 9.0 8.0 8.5 3.2 5316 chr2L 17819880 intron CadN2 - chr2L 17822538 intron CadN2 - chr2L 17825196 intron CadN2 - chr2L_30_17820001 chr2L_17820001 RAL-109_125b 1005 chr2L 17837112 17837180 chr2L 17837262 17837309 7 142 15.0 13.0 14.0 0.5 197 chr2L 17837112 intron CadN2 - chr2L 17837210 intron CadN2 - chr2L 17837309 intron CadN2 - chr2L_7_17835001 chr2L_17835001 RAL-109_125b 1006 chr2L 17855456 17855521 chr2L 17855584 17855649 11 125 12.0 15.0 13.5 0.8 193 chr2L 17855456 intron CadN2 - chr2L 17855552 intron CadN2 - chr2L 17855649 intron CadN2 - chr2L_11_17855001 chr2L_17855001 RAL-109_125b 1007 chr2L 17869772 17869831 chr2L 17869898 17869954 7 129 16.0 14.0 15.0 0.4 182 chr2L 17869772 intron CadN2 - chr2L 17869863 intron CadN2 - chr2L 17869954 intron CadN2 - chr2L_7_17865001 chr2L_17865001 RAL-109_125b 1008 chr2L 17879970 17879998 chr2L 17880107 17880135 7 137 11.5 13.5 12.5 0.5 165 chr2L 17879970 intergenic not near genes chr2L 17880052 intergenic not near genes chr2L 17880135 intergenic not near genes chr2L_7_17880001 chr2L_17880001 RAL-109_125b 1009 chr2L 17893357 17893407 chr2L 17894119 17894144 7 757 12.0 20.5 16.2 0.4 787 chr2L 17893357 intergenic CR43420 + chr2L 17893750 intergenic CR43420 + chr2L 17894144 5` UTR CR43420 + chr2L_7_17890001 chr2L_17890001 RAL-109_125b 1010 chr2L 17897193 17897222 chr2L 17897318 17897348 4 128 13.0 12.5 12.8 0.3 155 chr2L 17897193 intergenic not near genes chr2L 17897270 intergenic not near genes chr2L 17897348 intergenic not near genes chr2L_4_17895001 chr2L_17895001 RAL-109_125b 1011 chr2L 17911933 17911983 chr2L 17914145 17914211 pogo 17 2228 7.5 6.0 6.8 2.2 2278 chr2L 17911933 intergenic not near genes chr2L 17913072 intergenic not near genes chr2L 17914211 intergenic CG43271 - chr2L_17_17910001 chr2L_17910001 RAL-109_125b 1012 chr2L 17925988 17926005 chr2L 17926224 17926241 4 235 14.0 23.0 18.5 0.2 253 chr2L 17925988 intergenic not near genes chr2L 17926114 intergenic not near genes chr2L 17926241 intergenic not near genes chr2L_4_17925001 chr2L_17925001 RAL-109_125b 1013 chr2L 17933495 17933547 chr2L 17933936 17933988 11 441 19.0 14.0 16.5 0.6 493 chr2L 17933495 intergenic not near genes chr2L 17933742 intergenic not near genes chr2L 17933988 intergenic not near genes chr2L_11_17930001 chr2L_17930001 RAL-109_125b 1014 chr2L 17943338 17943384 chr2L 17943627 17943665 13 314 19.0 20.5 19.8 0.6 327 chr2L 17943338 intergenic not near genes chr2L 17943502 intergenic not near genes chr2L 17943665 intergenic not near genes chr2L_13_17940001 chr2L_17940001 RAL-109_125b 1015 chr2L 17943857 17943919 chr2L 17944010 17944042 8 148 24.0 27.5 25.8 0.3 185 chr2L 17943857 intergenic not near genes chr2L 17943950 intergenic not near genes chr2L 17944042 intergenic not near genes chr2L_8_17940001 chr2L_17940001 RAL-109_125b 1016 chr2L 17951907 17951970 chr2L 17953424 17953487 hobo 33 1516 12.0 9.5 10.8 2.8 1580 chr2L 17951907 intergenic CR44398 -,CR44397 - chr2L 17952697 intergenic not near genes chr2L 17953487 intergenic not near genes chr2L_33_17950001 chr2L_17950001 RAL-109_125b 1017 chr2L 17989969 17990007 chr2L 17990080 17990122 7 111 33.0 33.5 33.2 0.2 153 chr2L 17989969 intergenic Prosbeta5R2 + chr2L 17990046 intergenic Prosbeta5R2 + chr2L 17990122 intergenic Prosbeta5R2 + chr2L_7_17990001 chr2L_17990001 RAL-109_125b 1018 chr2L 17987322 17987390 chr2L 17991477 17991544 18 4156 53.5 26.5 40.0 0.4 4222 chr2L 17987322 exon CG5681 + chr2L 17989433 intergenic not near genes chr2L 17991544 3` UTR Prosbeta5R2 + chr2L_18_17985001 chr2L_17985001 RAL-109_125b 1019 chr2L 18036152 18036219 chr2L 18036461 18036528 12 305 20.5 21.5 21.0 0.5 376 chr2L 18036152 intron rdo + chr2L 18036340 intron rdo + chr2L 18036528 intron rdo + chr2L_12_18035001 chr2L_18035001 RAL-109_125b 1020 chr2L 18051831 18051899 chr2L 18061028 18061095 roo 31 9191 10.5 8.5 9.5 3.0 9264 chr2L 18051831 intron rdo + chr2L 18056463 intron rdo + chr2L 18061095 intron rdo + chr2L_31_18055001 chr2L_18055001 RAL-109_125b 1021 chr2L 18079770 18079831 chr2L 18079905 18079967 10 135 15.5 21.0 18.2 0.5 197 chr2L 18079770 intron Arr1 + chr2L 18079868 intron Arr1 + chr2L 18079967 exon Arr1 + chr2L_10_18075001 chr2L_18075001 RAL-109_125b 1022 chr2L 18095548 18095586 chr2L 18095679 18095717 10 131 19.5 16.5 18.0 0.5 169 chr2L 18095548 intergenic not near genes chr2L 18095632 intergenic not near genes chr2L 18095717 intergenic not near genes chr2L_10_18095001 chr2L_18095001 RAL-109_125b 1023 chr2L 18111194 18111217 chr2L 18111335 18111352 8 139 22.5 9.5 16.0 0.5 158 chr2L 18111194 intergenic not near genes chr2L 18111273 intergenic not near genes chr2L 18111352 intergenic not near genes chr2L_8_18110001 chr2L_18110001 RAL-109_125b 1024 chr2L 18230233 18230305 chr2L 18230367 18230405 14 126 22.0 21.5 21.8 0.6 172 chr2L 18230233 intron CG42750 - chr2L 18230319 intron CG42750 - chr2L 18230405 intron CG42750 - chr2L_14_18230001 chr2L_18230001 RAL-109_125b 1025 chr2L 18254504 18254784 chr2L 18254637 18254934 13 135 14.5 15.0 14.8 0.8 430 chr2L 18254504 intron CG42750 - chr2L 18254719 intron CG42750 - chr2L 18254934 intron CG42750 - chr2L_13_18250001 chr2L_18250001 RAL-109_125b 1026 chr2L 18254787 18254831 chr2L 18254937 18254981 12 148 11.5 20.0 15.8 0.7 194 chr2L 18254787 intron CG42750 - chr2L 18254884 intron CG42750 - chr2L 18254981 intron CG42750 - chr2L_12_18250001 chr2L_18250001 RAL-109_125b 1027 chr2L 18264015 18264076 chr2L 18264142 18264203 14 123 17.5 9.5 13.5 1.0 188 chr2L 18264015 intron CG42750 - chr2L 18264109 intron CG42750 - chr2L 18264203 intron CG42750 - chr2L_14_18260001 chr2L_18260001 RAL-109_125b 1028 chr2L 18264077 18264173 chr2L 18264139 18264268 12 119 7.0 10.0 8.5 1.3 191 chr2L 18264077 intron CG42750 - chr2L 18264172 intron CG42750 - chr2L 18264268 intron CG42750 - chr2L_12_18260001 chr2L_18260001 RAL-109_125b 1029 chr2L 18274010 18274033 chr2L 18274146 18274169 5 136 18.5 14.0 16.2 0.3 159 chr2L 18274010 intron CG42750 - chr2L 18274090 intron CG42750 - chr2L 18274169 intron CG42750 - chr2L_5_18270001 chr2L_18270001 RAL-109_125b 1030 chr2L 18274034 18274061 chr2L 18274128 18274197 9 131 16.5 12.5 14.5 0.6 163 chr2L 18274034 intron CG42750 - chr2L 18274116 intron CG42750 - chr2L 18274197 intron CG42750 - chr2L_9_18270001 chr2L_18270001 RAL-109_125b 1031 chr2L 18300237 18300249 chr2L 18300352 18300380 4 120 15.0 18.5 16.8 0.2 143 chr2L 18300237 intergenic not near genes chr2L 18300308 intergenic not near genes chr2L 18300380 intergenic not near genes chr2L_4_18300001 chr2L_18300001 RAL-109_125b 1032 chr2L 18303928 18303993 chr2L 18304069 18304078 12 136 13.0 16.0 14.5 0.8 150 chr2L 18303928 intergenic not near genes chr2L 18304003 intergenic not near genes chr2L 18304078 intergenic not near genes chr2L_12_18300001 chr2L_18300001 RAL-109_125b 1033 chr2L 18307846 18307915 chr2L 18307973 18308042 12 127 24.0 20.5 22.2 0.5 196 chr2L 18307846 intergenic CR43353 - chr2L 18307944 intergenic CR43353 - chr2L 18308042 intergenic CR43353 - chr2L_12_18305001 chr2L_18305001 RAL-109_125b 1034 chr2L 18334577 18334637 chr2L 18334712 18334772 15 133 20.0 17.0 18.5 0.8 195 chr2L 18334577 intron Fas3 + chr2L 18334674 intron Fas3 + chr2L 18334772 intron Fas3 + chr2L_15_18330001 chr2L_18330001 RAL-109_125b 1035 chr2L 18359517 18359577 chr2L 18359665 18359720 9 145 20.0 15.5 17.8 0.5 203 chr2L 18359517 intron Fas3 + chr2L 18359618 intron Fas3 + chr2L 18359720 intron Fas3 + chr2L_9_18355001 chr2L_18355001 RAL-109_125b 1036 chr2L 18364220 18364280 chr2L 18364370 18364430 8 150 21.0 18.0 19.5 0.4 210 chr2L 18364220 intron Fas3 + chr2L 18364325 intron Fas3 + chr2L 18364430 intron Fas3 + chr2L_8_18360001 chr2L_18360001 RAL-109_125b 1037 chr2L 18407986 18408042 chr2L 18412820 18412884 Doc 10 4836 13.5 0.0 6.8 1.3 4898 chr2L 18407986 intergenic not near genes chr2L 18410435 intergenic not near genes chr2L 18412884 intergenic not near genes chr2L_10_18410001 chr2L_18410001 RAL-109_125b 1038 chr2L 18423817 18423870 chr2L 18423958 18423990 5 137 17.0 21.5 19.2 0.2 173 chr2L 18423817 intergenic not near genes chr2L 18423904 intergenic not near genes chr2L 18423990 intergenic not near genes chr2L_5_18420001 chr2L_18420001 RAL-109_125b 1039 chr2L 18431384 18431446 chr2L 18431529 18431595 14 145 15.0 15.5 15.2 0.9 211 chr2L 18431384 intergenic not near genes chr2L 18431490 intergenic not near genes chr2L 18431595 intergenic not near genes chr2L_14_18430001 chr2L_18430001 RAL-109_125b 1040 chr2L 18442297 18442374 chr2L 18442426 18442458 13 120 21.5 23.5 22.5 0.6 161 chr2L 18442297 3` UTR RpS26 - chr2L 18442378 3` UTR RpS26 - chr2L 18442458 3` UTR RpS26 - chr2L_13_18440001 chr2L_18440001 RAL-109_125b 1041 chr2L 18443333 18443365 chr2L 18443459 18443491 5 125 16.5 18.0 17.2 0.3 158 chr2L 18443333 intergenic RpS26 - chr2L 18443412 intergenic RpS26 - chr2L 18443491 intergenic RpS26 - chr2L_5_18440001 chr2L_18440001 RAL-109_125b 1042 chr2L 18449351 18449413 chr2L 18449502 18449564 9 151 14.0 20.0 17.0 0.5 213 chr2L 18449351 intergenic bsf -,ncm - chr2L 18449458 intergenic bsf - chr2L 18449564 3` UTR bsf - chr2L_9_18445001 chr2L_18445001 RAL-109_125b 1043 chr2L 18462785 18462852 chr2L 18462911 18462978 14 121 15.5 16.5 16.0 0.8 193 chr2L 18462785 intron let-7-C + chr2L 18462882 intron let-7-C + chr2L 18462978 intron let-7-C + chr2L_14_18460001 chr2L_18460001 RAL-109_125b 1044 chr2L 18502534 18502605 chr2L 18503027 18503099 11 487 23.0 16.5 19.8 0.5 565 chr2L 18502534 intron kon - chr2L 18502816 intron kon - chr2L 18503099 intron kon - chr2L_11_18500001 chr2L_18500001 RAL-109_125b 1045 chr2L 18538549 18538586 chr2L 18538677 18538717 6 131 15.5 24.5 20.0 0.3 168 chr2L 18538549 intron Pde11 - chr2L 18538633 intron Pde11 - chr2L 18538717 intron Pde11 - chr2L_6_18535001 chr2L_18535001 RAL-109_125b 1046 chr2L 18561510 18561578 chr2L 18561652 18561720 7 142 18.5 19.0 18.8 0.4 210 chr2L 18561510 intron Pde11 - chr2L 18561615 intron Pde11 - chr2L 18561720 intron Pde11 - chr2L_7_18560001 chr2L_18560001 RAL-109_125b 1047 chr2L 18587113 18587137 chr2L 18587283 18587307 7 170 7.0 16.5 11.8 0.5 194 chr2L 18587113 intron Pde11 - chr2L 18587210 intron Pde11 - chr2L 18587307 intron Pde11 - chr2L_7_18585001 chr2L_18585001 RAL-109_125b 1048 chr2L 18628422 18628479 chr2L 18628562 18628596 13 136 26.0 24.0 25.0 0.5 174 chr2L 18628422 intron MESR3 + chr2L 18628509 intron MESR3 + chr2L 18628596 intron MESR3 + chr2L_13_18625001 chr2L_18625001 RAL-109_125b 1049 chr2L 18664538 18664574 chr2L 18664664 18664700 9 126 22.5 20.0 21.2 0.4 162 chr2L 18664538 intergenic not near genes chr2L 18664619 intergenic not near genes chr2L 18664700 intergenic not near genes chr2L_9_18660001 chr2L_18660001 RAL-109_125b 1050 chr2L 18762334 18762367 chr2L 18762466 18762509 5 137 22.5 18.5 20.5 0.2 175 chr2L 18762334 intergenic not near genes chr2L 18762422 intergenic ham - chr2L 18762509 intergenic ham - chr2L_5_18760001 chr2L_18760001 RAL-109_125b 1051 chr2L 18767601 18767658 chr2L 18767723 18767787 9 122 17.5 15.5 16.5 0.5 186 chr2L 18767601 intron ham - chr2L 18767694 intron ham - chr2L 18767787 intron ham - chr2L_9_18765001 chr2L_18765001 RAL-109_125b 1052 chr2L 18811369 18811431 chr2L 18811501 18811563 19 132 8.0 3.5 5.8 2.8 194 chr2L 18811369 intergenic CG10570 -,CG42502 - chr2L 18811466 intergenic CG10570 -,CG42502 - chr2L 18811563 intergenic not near genes chr2L_19_18810001 chr2L_18810001 RAL-109_125b 1053 chr2L 18812532 18812578 chr2L 18812839 18812891 11 312 12.5 20.0 16.2 0.6 359 chr2L 18812532 intergenic CG17325 +,CG42305 + chr2L 18812712 5` UTR,5` UTR CG17325 +,CG42305 + chr2L 18812891 5` UTR,5` UTR CG17325 +,CG42305 + chr2L_11_18810001 chr2L_18810001 RAL-109_125b 1054 chr2L 18898363 18898400 chr2L 18898480 18898524 6 127 21.0 10.0 15.5 0.4 161 chr2L 18898363 intergenic not near genes chr2L 18898444 intergenic not near genes chr2L 18898524 intergenic not near genes chr2L_6_18895001 chr2L_18895001 RAL-109_125b 1055 chr2L 18902580 18902649 chr2L 18902911 18902980 16 328 14.0 17.5 15.8 1.0 400 chr2L 18902580 intergenic not near genes chr2L 18902780 intergenic not near genes chr2L 18902980 intergenic not near genes chr2L_16_18900001 chr2L_18900001 RAL-109_125b 1056 chr2L 18926536 18926591 chr2L 18926692 18926748 6 157 9.5 17.5 13.5 0.4 212 chr2L 18926536 intron ssp3 - chr2L 18926642 intron ssp3 - chr2L 18926748 intron ssp3 - chr2L_6_18925001 chr2L_18925001 RAL-109_125b 1057 chr2L 19016204 19016211 chr2L 19016350 19016357 4 146 27.0 14.5 20.8 0.2 153 chr2L 19016204 intergenic not near genes chr2L 19016280 intergenic not near genes chr2L 19016357 intergenic not near genes chr2L_4_19015001 chr2L_19015001 RAL-109_125b 1058 chr2L 19016213 19016266 chr2L 19016348 19016412 7 144 23.5 14.5 19.0 0.3 199 chr2L 19016213 intergenic not near genes chr2L 19016312 intergenic not near genes chr2L 19016412 intergenic not near genes chr2L_7_19015001 chr2L_19015001 RAL-109_125b 1059 chr2L 19024096 19024097 chr2L 21768291 21768291 4 2744196 16.5 26.5 21.5 0.2 2744195 chr2L 19024096 3` UTR CR43700 - chr2L 20396194 intron CG10947 - chr2L 21768291 intron CG31612 - chr2L_4_20395001 chr2L_20395001 RAL-109_125b 1060 chr2L 19051584 19051602 chr2L 19051765 19051783 8 181 15.0 14.0 14.5 0.5 199 chr2L 19051584 5` UTR l(2)37Bb - chr2L 19051684 intergenic l(2)37Bb -,Rpn3 + chr2L 19051783 intergenic Rpn3 +,l(2)37Bb - chr2L_8_19050001 chr2L_19050001 RAL-109_125b 1061 chr2L 19122738 19122783 chr2L 19122867 19122912 8 124 25.5 25.5 25.5 0.3 174 chr2L 19122738 exon l(2)37Cc - chr2L 19122825 intron l(2)37Cc - chr2L 19122912 intron l(2)37Cc - chr2L_8_19120001 chr2L_19120001 RAL-109_125b 1062 chr2L 19147323 19147387 chr2L 19154403 19154472 297 29 7083 15.0 7.0 11.0 2.4 7149 chr2L 19147323 intron brat + chr2L 19150898 intron brat + chr2L 19154472 intron brat + chr2L_29_19150001 chr2L_19150001 RAL-109_125b 1063 chr2L 19162138 19162159 chr2L 19162264 19162285 9 126 25.5 25.5 25.5 0.3 147 chr2L 19162138 intron brat + chr2L 19162212 intron brat + chr2L 19162285 intron brat + chr2L_9_19160001 chr2L_19160001 RAL-109_125b 1064 chr2L 19163325 19163395 chr2L 19163449 19163488 18 123 30.0 26.5 28.2 0.6 163 chr2L 19163325 intron brat + chr2L 19163406 intron brat + chr2L 19163488 intron brat + chr2L_18_19160001 chr2L_19160001 RAL-109_125b 1065 chr2L 19189689 19189745 chr2L 19189817 19189873 12 128 22.5 21.0 21.8 0.5 184 chr2L 19189689 3` UTR pigeon + chr2L 19189781 3` UTR pigeon + chr2L 19189873 3` UTR pigeon + chr2L_12_19185001 chr2L_19185001 RAL-109_125b 1066 chr2L 19189943 19189985 chr2L 19190147 19190189 7 202 15.0 25.5 20.2 0.3 246 chr2L 19189943 intergenic pigeon +,drl + chr2L 19190066 intergenic pigeon +,drl + chr2L 19190189 intergenic drl +,pigeon + chr2L_7_19190001 chr2L_19190001 RAL-109_125b 1067 chr2L 19199646 19199701 chr2L 19199760 19199816 14 119 19.0 17.0 18.0 0.7 170 chr2L 19199646 intron drl + chr2L 19199731 intron drl + chr2L 19199816 intron drl + chr2L_14_19195001 chr2L_19195001 RAL-109_125b 1068 chr2L 19209580 19209645 chr2L 19209715 19209780 10 132 21.0 21.0 21.0 0.5 200 chr2L 19209580 intergenic not near genes chr2L 19209680 intergenic not near genes chr2L 19209780 intergenic not near genes chr2L_10_19205001 chr2L_19205001 RAL-109_125b 1069 chr2L 19237259 19237274 chr2L 19237409 19237424 5 150 19.0 5.0 12.0 0.4 165 chr2L 19237259 intergenic not near genes chr2L 19237342 intergenic not near genes chr2L 19237424 intergenic not near genes chr2L_5_19235001 chr2L_19235001 RAL-109_125b 1070 chr2L 19237275 19237336 chr2L 19237404 19237446 21 140 7.0 4.5 5.8 3.1 171 chr2L 19237275 intergenic not near genes chr2L 19237360 intergenic not near genes chr2L 19237446 intergenic not near genes chr2L_21_19235001 chr2L_19235001 RAL-109_125b 1071 chr2L 19242628 19242670 chr2L 19243117 19243154 13 487 21.0 25.0 23.0 0.5 526 chr2L 19242628 intergenic not near genes chr2L 19242891 intergenic not near genes chr2L 19243154 intergenic not near genes chr2L_13_19240001 chr2L_19240001 RAL-109_125b 1072 chr2L 19246784 19246797 chr2L 19246914 19246927 8 130 17.5 13.0 15.2 0.5 143 chr2L 19246784 intergenic not near genes chr2L 19246856 intergenic not near genes chr2L 19246927 intergenic not near genes chr2L_8_19245001 chr2L_19245001 RAL-109_125b 1073 chr2L 19246798 19246848 chr2L 19246912 19246973 11 125 9.0 11.5 10.2 1.0 175 chr2L 19246798 intergenic not near genes chr2L 19246886 intergenic not near genes chr2L 19246973 intergenic not near genes chr2L_11_19245001 chr2L_19245001 RAL-109_125b 1074 chr2L 19256049 19256109 chr2L 19256222 19256282 11 173 33.5 15.5 24.5 0.4 233 chr2L 19256049 intergenic not near genes chr2L 19256166 intergenic not near genes chr2L 19256282 intergenic not near genes chr2L_11_19255001 chr2L_19255001 RAL-109_125b 1075 chr2L 19270854 19270921 chr2L 19270994 19271000 8 132 15.5 24.0 19.8 0.4 146 chr2L 19270854 intron CR44190 - chr2L 19270927 intron CR44190 - chr2L 19271000 intron CR44190 - chr2L_8_19270001 chr2L_19270001 RAL-109_125b 1076 chr2L 19331659 19331683 chr2L 19331744 19331802 7 114 19.0 16.0 17.5 0.4 143 chr2L 19331659 intergenic not near genes chr2L 19331730 intergenic not near genes chr2L 19331802 intergenic not near genes chr2L_7_19330001 chr2L_19330001 RAL-109_125b 1077 chr2L 19337963 19338023 chr2L 19338103 19338147 10 124 23.0 27.5 25.2 0.4 184 chr2L 19337963 intergenic not near genes chr2L 19338055 intergenic not near genes chr2L 19338147 intergenic not near genes chr2L_10_19335001 chr2L_19335001 RAL-109_125b 1078 chr2L 19344971 19345034 chr2L 19357225 19357293 blood 21 12252 10.0 7.5 8.8 2.1 12322 chr2L 19344971 intron dnt - chr2L 19351132 intron dnt - chr2L 19357293 intron dnt - chr2L_21_19350001 chr2L_19350001 RAL-109_125b 1079 chr2L 19357497 19357561 chr2L 19357635 19357700 30 139 9.5 8.0 8.8 3.1 203 chr2L 19357497 intron dnt - chr2L 19357598 intron dnt - chr2L 19357700 intron dnt - chr2L_30_19355001 chr2L_19355001 RAL-109_125b 1080 chr2L 19405582 19405642 chr2L 19405722 19405781 16 139 6.0 0.5 3.2 3.8 199 chr2L 19405582 intron Pax - chr2L 19405682 intron Pax - chr2L 19405781 intron Pax - chr2L_16_19405001 chr2L_19405001 RAL-109_125b 1081 chr2L 19407684 19407740 chr2L 19407923 19407987 23 244 24.5 25.5 25.0 0.9 303 chr2L 19407684 intron Pax - chr2L 19407836 intron Pax - chr2L 19407987 intron Pax - chr2L_23_19405001 chr2L_19405001 RAL-109_125b 1082 chr2L 19437479 19437488 chr2L 19437621 19437630 5 142 24.5 24.0 24.2 0.2 151 chr2L 19437479 intron CG10237 - chr2L 19437554 intron CG10237 - chr2L 19437630 intron CG10237 - chr2L_5_19435001 chr2L_19435001 RAL-109_125b 1083 chr2L 19437492 19437530 chr2L 19437620 19437672 8 136 18.0 23.5 20.8 0.4 180 chr2L 19437492 intron CG10237 - chr2L 19437582 intron CG10237 - chr2L 19437672 exon CG10237 - chr2L_8_19435001 chr2L_19435001 RAL-109_125b 1084 chr2L 19441021 19441076 chr2L 19441148 19441203 12 124 27.0 23.5 25.2 0.5 182 chr2L 19441021 intron CG10237 - chr2L 19441112 intron CG10237 - chr2L 19441203 5` UTR CG10237 - chr2L_12_19440001 chr2L_19440001 RAL-109_125b 1085 chr2L 19487166 19487232 chr2L 19487303 19487366 15 137 22.5 26.0 24.2 0.6 200 chr2L 19487166 intergenic CG13083 + chr2L 19487266 intergenic CG13083 + chr2L 19487366 intergenic CG13083 + chr2L_15_19485001 chr2L_19485001 RAL-109_125b 1086 chr2L 19520133 19520182 chr2L 19520262 19520311 8 129 7.0 8.5 7.8 0.9 178 chr2L 19520133 intron CG10132 + chr2L 19520222 intron CG10132 + chr2L 19520311 intron CG10132 + chr2L_8_19520001 chr2L_19520001 RAL-109_125b 1087 chr2L 19543083 19543109 chr2L 19543217 19543243 6 134 41.0 20.5 30.8 0.2 160 chr2L 19543083 intron ref(2)P + chr2L 19543163 intron ref(2)P + chr2L 19543243 intron ref(2)P + chr2L_6_19540001 chr2L_19540001 RAL-109_125b 1088 chr2L 19543113 19543143 chr2L 19543210 19543277 8 124 36.0 21.5 28.8 0.3 164 chr2L 19543113 intron ref(2)P + chr2L 19543195 intron ref(2)P + chr2L 19543277 intron ref(2)P + chr2L_8_19540001 chr2L_19540001 RAL-109_125b 1089 chr2L 19557782 19557799 chr2L 19557924 19557941 4 142 16.0 17.0 16.5 0.2 159 chr2L 19557782 intergenic Tep5 + chr2L 19557862 intergenic Tep5 + chr2L 19557941 intergenic Tep5 + chr2L_4_19555001 chr2L_19555001 RAL-109_125b 1090 chr2L 19558489 19558540 chr2L 19558643 19558694 9 154 14.5 19.5 17.0 0.5 205 chr2L 19558489 intron Tep5 + chr2L 19558592 intron Tep5 + chr2L 19558694 intron Tep5 + chr2L_9_19555001 chr2L_19555001 RAL-109_125b 1091 chr2L 19559956 19560035 chr2L 19560259 19560337 15 301 29.5 26.0 27.8 0.5 381 chr2L 19559956 exon Tep5 + chr2L 19560146 exon Tep5 + chr2L 19560337 intron Tep5 + chr2L_15_19560001 chr2L_19560001 RAL-109_125b 1092 chr2L 19560799 19560864 chr2L 19560929 19561009 20 134 4.0 0.0 2.0 6.7 210 chr2L 19560799 exon Tep5 + chr2L 19560904 exon Tep5 + chr2L 19561009 exon Tep5 + chr2L_20_19560001 chr2L_19560001 RAL-109_125b 1093 chr2L 19562477 19562559 chr2L 19562608 19562689 13 128 19.5 21.0 20.2 0.6 212 chr2L 19562477 exon Tep5 + chr2L 19562583 intron Tep5 + chr2L 19562689 exon Tep5 + chr2L_13_19560001 chr2L_19560001 RAL-109_125b 1094 chr2L 19608562 19608601 chr2L 19608703 19608742 12 140 20.0 20.5 20.2 0.6 180 chr2L 19608562 intron Lar + chr2L 19608652 intron Lar + chr2L 19608742 intron Lar + chr2L_12_19605001 chr2L_19605001 RAL-109_125b 1095 chr2L 19612960 19612970 chr2L 19613055 19613107 6 120 17.0 17.0 17.0 0.3 147 chr2L 19612960 intron Lar + chr2L 19613034 intron Lar + chr2L 19613107 intron Lar + chr2L_6_19610001 chr2L_19610001 RAL-109_125b 1096 chr2L 19620059 19620122 chr2L 19621086 19621124 jockey 15 1020 9.0 0.0 4.5 2.7 1065 chr2L 19620059 intron Lar + chr2L 19620592 intron Lar + chr2L 19621124 intron Lar + chr2L_15_19620001 chr2L_19620001 RAL-109_125b 1097 chr2L 19621100 19621134 chr2L 19621228 19621230 8 121 1.0 20.5 10.8 0.7 130 chr2L 19621100 intron Lar + chr2L 19621165 intron Lar + chr2L 19621230 intron Lar + chr2L_8_19620001 chr2L_19620001 RAL-109_125b 1098 chr2L 19652533 19652590 chr2L 19674017 19674074 opus 21 21483 8.0 12.5 10.2 1.9 21541 chr2L 19652533 intron Lar + chr2L 19663304 intron Lar + chr2L 19674074 intron Lar + chr2L_21_19660001 chr2L_19660001 RAL-109_125b 1099 chr2L 19690290 19690355 chr2L 19690411 19690479 6 111 20.5 21.5 21.0 0.3 189 chr2L 19690290 intron Lar + chr2L 19690384 intron Lar + chr2L 19690479 intron Lar + chr2L_6_19690001 chr2L_19690001 RAL-109_125b 1100 chr2L 19703501 19703560 chr2L 19712687 19712746 roo 23 9185 7.0 7.0 7.0 2.9 9245 chr2L 19703501 intron Lar + chr2L 19708124 intron Lar + chr2L 19712746 intron Lar + chr2L_23_19705001 chr2L_19705001 RAL-109_125b 1101 chr2L 19718464 19718519 chr2L 19718623 19718676 7 152 19.5 19.0 19.2 0.3 212 chr2L 19718464 intron Lar + chr2L 19718570 intron Lar + chr2L 19718676 intron Lar + chr2L_7_19715001 chr2L_19715001 RAL-109_125b 1102 chr2L 19737321 19737379 chr2L 19740836 19740876 1360 5 3502 18.5 19.5 19.0 0.2 3555 chr2L 19737321 intergenic Nf-YB + chr2L 19739098 intergenic not near genes chr2L 19740876 intergenic not near genes chr2L_5_19735001 chr2L_19735001 RAL-109_125b 1103 chr2L 19762770 19762788 chr2L 19763062 19763080 pogo 7 292 13.5 9.5 11.5 0.6 310 chr2L 19762770 exon fbp - chr2L 19762925 intron fbp - chr2L 19763080 intron fbp - chr2L_7_19760001 chr2L_19760001 RAL-109_125b 1104 chr2L 19762791 19762829 chr2L 19763058 19763121 pogo 12 288 5.5 9.0 7.2 1.5 330 chr2L 19762791 5` UTR fbp - chr2L 19762956 intron fbp - chr2L 19763121 intron fbp - chr2L_12_19760001 chr2L_19760001 RAL-109_125b 1105 chr2L 19773123 19773144 chr2L 19773260 19773281 7 137 23.0 24.5 23.8 0.3 158 chr2L 19773123 intergenic not near genes chr2L 19773202 intergenic not near genes chr2L 19773281 intergenic not near genes chr2L_7_19770001 chr2L_19770001 RAL-109_125b 1106 chr2L 19773152 19773189 chr2L 19773249 19773326 5 129 23.5 23.5 23.5 0.2 174 chr2L 19773152 intergenic not near genes chr2L 19773239 intergenic not near genes chr2L 19773326 intergenic not near genes chr2L_5_19770001 chr2L_19770001 RAL-109_125b 1107 chr2L 19776620 19776658 chr2L 19776750 19776788 7 130 23.0 24.5 23.8 0.3 168 chr2L 19776620 3` UTR CdGAPr - chr2L 19776704 3` UTR CdGAPr - chr2L 19776788 3` UTR CdGAPr - chr2L_7_19775001 chr2L_19775001 RAL-109_125b 1108 chr2L 19824362 19824427 chr2L 19824495 19824560 24 129 7.0 11.5 9.2 2.4 198 chr2L 19824362 intron sick + chr2L 19824461 intron sick + chr2L 19824560 intron sick + chr2L_24_19820001 chr2L_19820001 RAL-109_125b 1109 chr2L 19871553 19871564 chr2L 19871690 19871701 7 137 8.0 31.5 19.8 0.3 148 chr2L 19871553 intron sick + chr2L 19871627 intron sick + chr2L 19871701 intron sick + chr2L_7_19870001 chr2L_19870001 RAL-109_125b 1110 chr2L 19890060 19890091 chr2L 19890186 19890220 8 128 18.0 18.5 18.2 0.4 160 chr2L 19890060 intron sick + chr2L 19890140 intron sick + chr2L 19890220 intron,3` UTR sick +,CG10481 - chr2L_8_19890001 chr2L_19890001 RAL-109_125b 1111 chr2L 19901446 19901506 chr2L 19901599 19901659 17 147 23.5 16.5 20.0 0.8 213 chr2L 19901446 intron sick + chr2L 19901552 intron sick + chr2L 19901659 intron sick + chr2L_17_19900001 chr2L_19900001 RAL-109_125b 1112 chr2L 19911265 19911318 chr2L 19911378 19911449 19 134 6.5 3.5 5.0 3.2 184 chr2L 19911265 intron,3` UTR sick +,CR43097 - chr2L 19911357 intron,3` UTR sick +,CR43097 - chr2L 19911449 intron,3` UTR sick +,CR43097 - chr2L_19_19910001 chr2L_19910001 RAL-109_125b 1113 chr2L 19912743 19912779 chr2L 19912908 19912932 5 164 16.0 20.5 18.2 0.3 189 chr2L 19912743 intron sick + chr2L 19912838 intron sick + chr2L 19912932 intron sick + chr2L_5_19910001 chr2L_19910001 RAL-109_125b 1114 chr2L 19935214 19935253 chr2L 19935323 19935373 6 114 11.5 8.5 10.0 0.5 159 chr2L 19935214 intron sick + chr2L 19935294 intron sick + chr2L 19935373 intron sick + chr2L_6_19935001 chr2L_19935001 RAL-109_125b 1115 chr2L 19947674 19947735 chr2L 19947810 19947871 11 135 11.5 19.0 15.2 0.7 197 chr2L 19947674 intron sick + chr2L 19947772 intron sick + chr2L 19947871 intron sick + chr2L_11_19945001 chr2L_19945001 RAL-109_125b 1116 chr2L 19950164 19950197 chr2L 19950296 19950329 8 131 6.5 7.5 7.0 1.0 165 chr2L 19950164 intron sick + chr2L 19950246 intron sick + chr2L 19950329 intron sick + chr2L_8_19950001 chr2L_19950001 RAL-109_125b 1117 chr2L 19953906 19953960 chr2L 19954037 19954091 10 130 7.0 7.0 7.0 1.2 185 chr2L 19953906 intron sick + chr2L 19953998 intron sick + chr2L 19954091 intron sick + chr2L_10_19950001 chr2L_19950001 RAL-109_125b 1118 chr2L 19964795 19964854 chr2L 19964930 19964984 19 131 22.5 20.5 21.5 0.8 189 chr2L 19964795 intron CG10680 + chr2L 19964890 exon CG10680 + chr2L 19964984 exon CG10680 + chr2L_19_19960001 chr2L_19960001 RAL-109_125b 1119 chr2L 20005826 20005895 chr2L 20010952 20011021 flea 21 5124 8.5 10.5 9.5 2.0 5195 chr2L 20005826 intron CG43861 - chr2L 20008424 intron CG43861 - chr2L 20011021 intron CG43861 - chr2L_21_20005001 chr2L_20005001 RAL-109_125b 1120 chr2L 20022039 20022096 chr2L 20022202 20022259 12 162 16.5 15.0 15.8 0.7 220 chr2L 20022039 intergenic not near genes chr2L 20022149 intergenic not near genes chr2L 20022259 intergenic not near genes chr2L_12_20020001 chr2L_20020001 RAL-109_125b 1121 chr2L 20026561 20026614 chr2L 20026693 20026746 13 132 23.5 26.0 24.8 0.5 185 chr2L 20026561 intergenic not near genes chr2L 20026654 intergenic not near genes chr2L 20026746 intergenic not near genes chr2L_13_20025001 chr2L_20025001 RAL-109_125b 1122 chr2L 20034577 20034643 chr2L 20034705 20034779 7 134 20.0 22.0 21.0 0.3 202 chr2L 20034577 intron sNPF + chr2L 20034678 intron sNPF + chr2L 20034779 intron sNPF + chr2L_7_20030001 chr2L_20030001 RAL-109_125b 1123 chr2L 20041396 20041441 chr2L 20041524 20041538 10 125 23.5 26.0 24.8 0.4 142 chr2L 20041396 intron sNPF + chr2L 20041467 intron sNPF + chr2L 20041538 intron sNPF + chr2L_10_20040001 chr2L_20040001 RAL-109_125b 1124 chr2L 20079475 20079519 chr2L 20079641 20079690 16 170 11.5 6.0 8.8 1.6 215 chr2L 20079475 intron,intron neb +,fok - chr2L 20079582 intron,intron neb +,fok - chr2L 20079690 intron,intron neb +,fok - chr2L_16_20075001 chr2L_20075001 RAL-109_125b 1125 chr2L 20098663 20098747 chr2L 20098997 20099076 15 332 11.5 14.5 13.0 1.1 413 chr2L 20098663 intron Kua + chr2L 20098870 intron Kua + chr2L 20099076 intron Kua + chr2L_15_20095001 chr2L_20095001 RAL-109_125b 1126 chr2L 20119507 20119510 chr2L 20119597 20119615 4 98 8.5 13.0 10.8 0.3 108 chr2L 20119507 intergenic not near genes chr2L 20119561 intergenic not near genes chr2L 20119615 intergenic not near genes chr2L_4_20115001 chr2L_20115001 RAL-109_125b 1127 chr2L 20225600 20225616 chr2L 20225728 20225744 6 126 22.0 26.5 24.2 0.2 144 chr2L 20225600 intergenic not near genes chr2L 20225672 intergenic not near genes chr2L 20225744 intergenic not near genes chr2L_6_20225001 chr2L_20225001 RAL-109_125b 1128 chr2L 20226249 20226262 chr2L 20226361 20226394 5 119 29.5 24.0 26.8 0.2 145 chr2L 20226249 intergenic not near genes chr2L 20226322 intergenic not near genes chr2L 20226394 intergenic not near genes chr2L_5_20225001 chr2L_20225001 RAL-109_125b 1129 chr2L 20226263 20226282 chr2L 20226357 20226414 5 120 26.0 23.5 24.8 0.2 151 chr2L 20226263 intergenic not near genes chr2L 20226338 intergenic not near genes chr2L 20226414 intergenic not near genes chr2L_5_20225001 chr2L_20225001 RAL-109_125b 1130 chr2L 20236475 20236536 chr2L 20236596 20236662 12 125 20.5 21.0 20.8 0.6 187 chr2L 20236475 intergenic not near genes chr2L 20236568 intergenic not near genes chr2L 20236662 intergenic not near genes chr2L_12_20235001 chr2L_20235001 RAL-109_125b 1131 chr2L 20272075 20272136 chr2L 20282836 20282897 copia 38 10760 4.5 10.0 7.2 4.6 10822 chr2L 20272075 intergenic not near genes chr2L 20277486 intergenic not near genes chr2L 20282897 intergenic not near genes chr2L_38_20275001 chr2L_20275001 RAL-109_125b 1132 chr2L 20296491 20296503 chr2L 20296622 20296634 8 131 0.0 6.0 3.0 2.0 143 chr2L 20296491 intergenic CR43414 - chr2L 20296562 intergenic CR43414 - chr2L 20296634 intergenic CR43414 - chr2L_8_20295001 chr2L_20295001 RAL-109_125b 1133 chr2L 20296505 20296533 chr2L 20296591 20296633 8 118 0.0 3.5 1.8 2.9 128 chr2L 20296505 intergenic CR43414 - chr2L 20296569 intergenic CR43414 - chr2L 20296633 intergenic CR43414 - chr2L_8_20295001 chr2L_20295001 RAL-109_125b 1134 chr2L 20303121 20303182 chr2L 20310639 20310700 blood 24 7518 6.0 8.5 7.2 2.9 7579 chr2L 20303121 intergenic not near genes chr2L 20306910 intergenic not near genes chr2L 20310700 intergenic not near genes chr2L_24_20305001 chr2L_20305001 RAL-109_125b 1135 chr2L 20310832 20310886 chr2L 20310961 20311015 15 127 9.0 6.5 7.8 1.7 183 chr2L 20310832 intergenic spir + chr2L 20310924 intergenic spir + chr2L 20311015 intergenic spir + chr2L_15_20310001 chr2L_20310001 RAL-109_125b 1136 chr2L 20351859 20351912 chr2L 20352004 20352057 13 142 17.5 22.0 19.8 0.6 198 chr2L 20351859 intron RtGEF + chr2L 20351958 intron RtGEF + chr2L 20352057 intron RtGEF + chr2L_13_20350001 chr2L_20350001 RAL-109_125b 1137 chr2L 20352516 20352579 chr2L 20352652 20352722 10 136 22.5 23.0 22.8 0.4 206 chr2L 20352516 intron RtGEF + chr2L 20352619 intron RtGEF + chr2L 20352722 intron RtGEF + chr2L_10_20350001 chr2L_20350001 RAL-109_125b 1138 chr2L 20372186 20372250 chr2L 20372470 20372531 pogo 21 294 5.5 9.0 7.2 2.6 345 chr2L 20372186 intergenic Ugt37a1 - chr2L 20372358 intergenic Ugt37a1 - chr2L 20372531 exon Ugt37a1 - chr2L_21_20370001 chr2L_20370001 RAL-109_125b 1139 chr2L 20379742 20379780 chr2L 20379832 20379848 8 110 20.5 23.0 21.8 0.4 106 chr2L 20379742 intron CG16798 - chr2L 20379795 intron CG16798 - chr2L 20379848 intron CG16798 - chr2L_8_20375001 chr2L_20375001 RAL-109_125b 1140 chr2L 20393744 20393807 chr2L 20393960 20394023 16 212 20.5 18.0 19.2 0.8 279 chr2L 20393744 intron CG10947 - chr2L 20393884 intron CG10947 - chr2L 20394023 intron CG10947 - chr2L_16_20390001 chr2L_20390001 RAL-109_125b 1141 chr2L 20400320 20400379 chr2L 20400489 20400548 11 169 21.0 24.0 22.5 0.5 228 chr2L 20400320 intron CG10947 - chr2L 20400434 intron CG10947 - chr2L 20400548 intron CG10947 - chr2L_11_20400001 chr2L_20400001 RAL-109_125b 1142 chr2L 20418699 20418701 chr2L 20418965 20418967 4 266 29.5 29.5 29.5 0.1 268 chr2L 20418699 intron,5` UTR Arpc2 +,snoRNA:Psi18S-525b + chr2L 20418833 intron,5` UTR Arpc2 +,snoRNA:Psi18S-525c + chr2L 20418967 intron,5` UTR Arpc2 +,snoRNA:Psi18S-525c + chr2L_4_20415001 chr2L_20415001 RAL-109_125b 1143 chr2L 20474373 20474396 chr2L 20474843 20474866 7 470 30.0 16.0 23.0 0.3 493 chr2L 20474373 intron CR44980 - chr2L 20474620 intron CR44980 - chr2L 20474866 intron CR44980 - chr2L_7_20470001 chr2L_20470001 RAL-109_125b 1144 chr2L 20474397 20474436 chr2L 20474842 20474899 6 463 27.5 16.5 22.0 0.3 502 chr2L 20474397 intron CR44980 - chr2L 20474648 intron CR44980 - chr2L 20474899 intron CR44980 - chr2L_6_20470001 chr2L_20470001 RAL-109_125b 1145 chr2L 20498645 20498708 chr2L 20498794 20498830 26 145 9.0 10.0 9.5 2.5 185 chr2L 20498645 intergenic not near genes chr2L 20498738 intergenic not near genes chr2L 20498830 intergenic not near genes chr2L_26_20495001 chr2L_20495001 RAL-109_125b 1146 chr2L 20524130 20524163 chr2L 20524264 20524295 5 133 10.5 0.0 5.2 0.8 165 chr2L 20524130 intergenic not near genes chr2L 20524212 intergenic not near genes chr2L 20524295 intergenic not near genes chr2L_5_20520001 chr2L_20520001 RAL-109_125b 1147 chr2L 20533824 20533854 chr2L 20533951 20533981 10 126 21.5 18.0 19.8 0.5 157 chr2L 20533824 intergenic not near genes chr2L 20533902 intergenic not near genes chr2L 20533981 intergenic not near genes chr2L_10_20530001 chr2L_20530001 RAL-109_125b 1148 chr2L 20550583 20550617 chr2L 20550719 20550747 5 135 26.0 24.5 25.2 0.2 164 chr2L 20550583 intergenic not near genes chr2L 20550665 intergenic not near genes chr2L 20550747 intergenic not near genes chr2L_5_20550001 chr2L_20550001 RAL-109_125b 1149 chr2L 20568612 20568684 chr2L 20569052 20569124 X-element 29 438 4.0 3.0 3.5 6.4 512 chr2L 20568612 intron CR45347 + chr2L 20568868 intron CR45347 + chr2L 20569124 intron CR45347 + chr2L_29_20565001 chr2L_20565001 RAL-109_125b 1150 chr2L 20572921 20572990 chr2L 20573056 20573119 17 131 20.5 19.5 20.0 0.8 198 chr2L 20572921 intron CR45347 + chr2L 20573020 intron CR45347 + chr2L 20573119 intron CR45347 + chr2L_17_20570001 chr2L_20570001 RAL-109_125b 1151 chr2L 20576178 20576191 chr2L 20583696 20583709 blood 9 7518 16.0 12.0 14.0 0.6 7531 chr2L 20576178 intergenic CR45347 + chr2L 20579944 intergenic not near genes chr2L 20583709 3` UTR CR44909 - chr2L_9_20575001 chr2L_20575001 RAL-109_125b 1152 chr2L 20576196 20576239 chr2L 20583689 20583744 blood 15 7515 8.5 11.0 9.8 1.4 7548 chr2L 20576196 intergenic CR45347 + chr2L 20579970 intergenic not near genes chr2L 20583744 3` UTR CR44909 - chr2L_15_20575001 chr2L_20575001 RAL-109_125b 1153 chr2L 20589451 20589522 chr2L 20589578 20589649 17 121 25.5 23.5 24.5 0.7 198 chr2L 20589451 intron CR44909 - chr2L 20589550 intron CR44909 - chr2L 20589649 intron CR44909 - chr2L_17_20585001 chr2L_20585001 RAL-109_125b 1154 chr2L 20597059 20597084 chr2L 20597175 20597211 8 117 22.5 22.5 22.5 0.3 152 chr2L 20597059 intron CR44909 - chr2L 20597135 intron CR44909 - chr2L 20597211 intron CR44909 - chr2L_8_20595001 chr2L_20595001 RAL-109_125b 1155 chr2L 20601750 20601809 chr2L 20601878 20601937 10 126 14.5 12.0 13.2 0.7 187 chr2L 20601750 intron CR44909 - chr2L 20601844 intron CR44909 - chr2L 20601937 intron CR44909 - chr2L_10_20600001 chr2L_20600001 RAL-109_125b 1156 chr2L 20602676 20602729 chr2L 20602809 20602867 7 135 16.5 20.0 18.2 0.4 191 chr2L 20602676 intron CR44909 - chr2L 20602772 intron CR44909 - chr2L 20602867 intron CR44909 - chr2L_7_20600001 chr2L_20600001 RAL-109_125b 1157 chr2L 20607614 20607656 chr2L 20607716 20607770 6 114 18.0 20.5 19.2 0.3 156 chr2L 20607614 intron,3` UTR CR44909 -,CR43608 - chr2L 20607692 intron,3` UTR CR44909 -,CR43608 - chr2L 20607770 intron,3` UTR CR44909 -,CR43608 - chr2L_6_20605001 chr2L_20605001 RAL-109_125b 1158 chr2L 20630667 20630739 chr2L 20630995 20631064 13 325 19.0 19.5 19.2 0.6 397 chr2L 20630667 intergenic not near genes chr2L 20630866 intergenic not near genes chr2L 20631064 intergenic not near genes chr2L_13_20630001 chr2L_20630001 RAL-109_125b 1159 chr2L 20643296 20643338 chr2L 20643478 20643520 9 182 17.5 10.5 14.0 0.6 224 chr2L 20643296 intergenic CG17470 -,phr6-4 - chr2L 20643408 3` UTR phr6-4 - chr2L 20643520 3` UTR phr6-4 - chr2L_9_20640001 chr2L_20640001 RAL-109_125b 1160 chr2L 20674784 20674857 chr2L 20674919 20674985 15 128 8.5 6.5 7.5 1.8 201 chr2L 20674784 intron CG31678 - chr2L 20674884 intron CG31678 - chr2L 20674985 intron CG31678 - chr2L_15_20670001 chr2L_20670001 RAL-109_125b 1161 chr2L 20695749 20695826 chr2L 20695887 20695964 19 137 18.5 21.0 19.8 0.9 215 chr2L 20695749 intron Hr38 - chr2L 20695856 intron Hr38 - chr2L 20695964 intron Hr38 - chr2L_19_20695001 chr2L_20695001 RAL-109_125b 1162 chr2L 20804687 20804728 chr2L 20804789 20804863 14 132 15.0 12.5 13.8 0.9 176 chr2L 20804687 intron CG9328 + chr2L 20804775 intron CG9328 + chr2L 20804863 intron CG9328 + chr2L_14_20800001 chr2L_20800001 RAL-109_125b 1163 chr2L 20807069 20807127 chr2L 20807202 20807248 9 123 25.0 27.5 26.2 0.3 179 chr2L 20807069 intron CG9328 + chr2L 20807158 intron CG9328 + chr2L 20807248 intron CG9328 + chr2L_9_20805001 chr2L_20805001 RAL-109_125b 1164 chr2L 20835787 20835829 chr2L 20836554 20836596 Quasimodo 13 767 10.0 11.0 10.5 1.1 809 chr2L 20835787 5` UTR Oseg5 - chr2L 20836192 intergenic Oseg5 -,Spn38F - chr2L 20836596 intergenic Spn38F - chr2L_13_20835001 chr2L_20835001 RAL-109_125b 1165 chr2L 20891245 20891312 chr2L 20891381 20891454 14 138 19.5 25.0 22.2 0.6 209 chr2L 20891245 intron,intron CG43739 -,sky - chr2L 20891350 intron,intron CG43739 -,sky - chr2L 20891454 intron,intron CG43739 -,sky - chr2L_14_20890001 chr2L_20890001 RAL-109_125b 1166 chr2L 20891484 20891545 chr2L 20896635 20896696 jockey 26 5146 6.0 9.5 7.8 3.0 5212 chr2L 20891484 intron,intron CG43739 -,sky - chr2L 20894090 intron,intron CG43739 -,sky - chr2L 20896696 intron,intron CG43739 -,sky - chr2L_26_20890001 chr2L_20890001 RAL-109_125b 1167 chr2L 20901438 20901491 chr2L 20902649 20902707 1360 11 1211 3.0 0.5 1.8 3.9 1269 chr2L 20901438 intron,intron CG43739 -,sky - chr2L 20902072 intron,intron CG43739 -,sky - chr2L 20902707 intron,intron CG43739 -,sky - chr2L_11_20900001 chr2L_20900001 RAL-109_125b 1168 chr2L 20922777 20922846 chr2L 20922922 20922974 14 133 14.5 15.5 15.0 0.9 197 chr2L 20922777 5` UTR Mtp - chr2L 20922876 5` UTR Mtp - chr2L 20922974 intergenic Mtp - chr2L_14_20920001 chr2L_20920001 RAL-109_125b 1169 chr2L 20967882 20967954 chr2L 20968025 20968097 20 140 21.5 24.0 22.8 0.8 215 chr2L 20967882 intron CG42238 - chr2L 20967990 intron CG42238 - chr2L 20968097 intron CG42238 - chr2L_20_20965001 chr2L_20965001 RAL-109_125b 1170 chr2L 20976608 20976661 chr2L 20981468 20981516 X-element 14 4862 8.0 7.5 7.8 1.6 4908 chr2L 20976608 intron CG42238 - chr2L 20979062 intron CG42238 - chr2L 20981516 intron CG42238 - chr2L_14_20975001 chr2L_20975001 RAL-109_125b 1171 chr2L 20984566 20984614 chr2L 20984697 20984745 15 129 17.0 20.5 18.8 0.8 179 chr2L 20984566 intron CG42238 - chr2L 20984656 intron CG42238 - chr2L 20984745 intron CG42238 - chr2L_15_20980001 chr2L_20980001 RAL-109_125b 1172 chr2L 21020235 21020298 chr2L 21023962 21024015 NOF 18 3722 10.5 10.0 10.2 1.6 3780 chr2L 21020235 intron CG42238 - chr2L 21022125 intron CG42238 - chr2L 21024015 intron CG42238 - chr2L_18_21020001 chr2L_21020001 RAL-109_125b 1173 chr2L 21041094 21041157 chr2L 21049405 21049468 Tirant 17 8310 7.0 11.0 9.0 1.7 8374 chr2L 21041094 intron CG42238 - chr2L 21045281 intron CG42238 - chr2L 21049468 intron CG42238 - chr2L_17_21045001 chr2L_21045001 RAL-109_125b 1174 chr2L 21119239 21119304 chr2L 21119373 21119438 10 134 20.0 18.0 19.0 0.5 199 chr2L 21119239 intron Nhe2 + chr2L 21119338 intron Nhe2 + chr2L 21119438 intron Nhe2 + chr2L_10_21115001 chr2L_21115001 RAL-109_125b 1175 chr2L 21123182 21123229 chr2L 21123313 21123360 7 131 14.5 14.0 14.2 0.5 178 chr2L 21123182 intron Nhe2 + chr2L 21123271 intron Nhe2 + chr2L 21123360 intron Nhe2 + chr2L_7_21120001 chr2L_21120001 RAL-109_125b 1176 chr2L 21173814 21173890 chr2L 21174108 21174184 14 292 22.5 19.5 21.0 0.6 370 chr2L 21173814 exon CG31627 + chr2L 21173999 exon CG31627 + chr2L 21174184 3` UTR bur - chr2L_14_21170001 chr2L_21170001 RAL-109_125b 1177 chr2L 21196128 21196194 chr2L 21196304 21196352 11 170 19.5 19.0 19.2 0.5 224 chr2L 21196128 intron Ret - chr2L 21196240 intron Ret - chr2L 21196352 intron Ret - chr2L_11_21195001 chr2L_21195001 RAL-109_125b 1178 chr2L 21258966 21259039 chr2L 21259103 21259176 11 137 21.5 22.5 22.0 0.5 210 chr2L 21258966 3` UTR Hr39 + chr2L 21259071 3` UTR Hr39 + chr2L 21259176 3` UTR Hr39 + chr2L_11_21255001 chr2L_21255001 RAL-109_125b 1179 chr2L 21262521 21262574 chr2L 21262656 21262708 11 133 18.5 19.0 18.8 0.6 187 chr2L 21262521 intergenic l(2)k14505 +,CG8671 + chr2L 21262614 intergenic l(2)k14505 +,CG8671 + chr2L 21262708 intergenic CG8671 +,l(2)k14505 + chr2L_11_21260001 chr2L_21260001 RAL-109_125b 1180 chr2L 21276608 21276679 chr2L 21276734 21276807 14 124 19.0 19.0 19.0 0.7 199 chr2L 21276608 intron CG8671 + chr2L 21276708 intron CG8671 + chr2L 21276807 intron CG8671 + chr2L_14_21275001 chr2L_21275001 RAL-109_125b 1181 chr2L 21284016 21284075 chr2L 21284532 21284591 14 519 17.0 16.0 16.5 0.8 575 chr2L 21284016 intergenic not near genes chr2L 21284304 intergenic not near genes chr2L 21284591 intergenic not near genes chr2L_14_21280001 chr2L_21280001 RAL-109_125b 1182 chr2L 21285602 21285656 chr2L 21285750 21285804 14 147 24.5 26.0 25.2 0.5 202 chr2L 21285602 intergenic Mio - chr2L 21285703 intergenic Mio - chr2L 21285804 intergenic Mio - chr2L_14_21285001 chr2L_21285001 RAL-109_125b 1183 chr2L 21286560 21286630 chr2L 21286688 21286759 26 127 10.5 7.0 8.8 2.7 199 chr2L 21286560 exon Mio - chr2L 21286660 intron Mio - chr2L 21286759 intron Mio - chr2L_26_21285001 chr2L_21285001 RAL-109_125b 1184 chr2L 21307440 21307487 chr2L 21307572 21307619 8 132 26.0 23.0 24.5 0.3 179 chr2L 21307440 intron Mio - chr2L 21307530 intron Mio - chr2L 21307619 intron Mio - chr2L_8_21305001 chr2L_21305001 RAL-109_125b 1185 chr2L 21323376 21323419 chr2L 21323514 21323557 6 138 11.5 8.5 10.0 0.5 181 chr2L 21323376 intergenic not near genes chr2L 21323466 intergenic not near genes chr2L 21323557 intergenic not near genes chr2L_6_21320001 chr2L_21320001 RAL-109_125b 1186 chr2L 21347507 21347568 chr2L 21355029 21355062 blood 24 7521 14.5 4.5 9.5 2.3 7555 chr2L 21347507 intron Tsp39D + chr2L 21351284 intron Tsp39D + chr2L 21355062 intron Tsp39D + chr2L_24_21350001 chr2L_21350001 RAL-109_125b 1187 chr2L 21381160 21381192 chr2L 21381313 21381345 4 140 26.5 26.0 26.2 0.1 185 chr2L 21381160 intron nrv3 + chr2L 21381252 intron nrv3 + chr2L 21381345 intron nrv3 + chr2L_4_21380001 chr2L_21380001 RAL-109_125b 1188 chr2L 21381193 21381229 chr2L 21381305 21381355 8 132 21.5 27.5 24.5 0.3 162 chr2L 21381193 intron nrv3 + chr2L 21381274 intron nrv3 + chr2L 21381355 intron nrv3 + chr2L_8_21380001 chr2L_21380001 RAL-109_125b 1189 chr2L 21596995 21597047 chr2L 21604779 21604796 roo 5 7783 5.5 5.5 5.5 0.8 7801 chr2L 21596995 intergenic not near genes chr2L 21600896 intergenic not near genes chr2L 21604796 intergenic not near genes chr2L_5_21600001 chr2L_21600001 RAL-109_125b 1190 chr2L 21691792 21691816 chr2L 21698312 21698325 Burdock 5 6518 5.5 0.0 2.8 1.3 6533 chr2L 21691792 intron CG31619 + chr2L 21695058 intron CG31619 + chr2L 21698325 intron CG31619 + chr2L_5_21695001 chr2L_21695001 RAL-109_125b 1191 chr2L 21755454 21755519 chr2L 21755622 21755693 20 171 6.0 8.5 7.2 2.4 239 chr2L 21755454 intron step - chr2L 21755574 intron step - chr2L 21755693 intron step - chr2L_20_21755001 chr2L_21755001 RAL-109_125b 1192 chr2L 21798027 21798065 chr2L 21877528 21877566 10 79501 27.5 30.0 28.8 0.3 79539 chr2L 21798027 intergenic CR44269 - chr2L 21837796 intergenic not near genes chr2L 21877566 intergenic not near genes chr2L_10_21835001 chr2L_21835001 RAL-109_125b 1193 chr2L 21836348 21836419 chr2L 21836488 21836559 16 131 15.5 8.5 12.0 1.2 211 chr2L 21836348 3` UTR tsh + chr2L 21836454 3` UTR tsh + chr2L 21836559 3` UTR tsh + chr2L_16_21835001 chr2L_21835001 RAL-109_125b 1194 chr2L 21855428 21855503 chr2L 21855564 21855640 18 134 6.5 9.0 7.8 2.0 212 chr2L 21855428 5` UTR CR44917 + chr2L 21855534 intron CR44917 + chr2L 21855640 intron CR44917 + chr2L_18_21855001 chr2L_21855001 RAL-109_125b 1195 chr2L 21859282 21859349 chr2L 21859402 21859453 24 127 7.0 8.5 7.8 2.7 171 chr2L 21859282 intron CR44917 + chr2L 21859368 intron CR44917 + chr2L 21859453 intron CR44917 + chr2L_24_21855001 chr2L_21855001 RAL-109_125b 1196 chr2L 21933899 21933916 chr2L 21934005 21934047 4 108 10.5 10.5 10.5 0.3 148 chr2L 21933899 intergenic not near genes chr2L 21933973 intergenic not near genes chr2L 21934047 intergenic not near genes chr2L_4_21930001 chr2L_21930001 RAL-109_125b 1197 chr2L 21961147 21961189 chr2L 21961345 21961390 5 204 17.0 19.5 18.2 0.3 243 chr2L 21961147 intergenic not near genes chr2L 21961268 intergenic not near genes chr2L 21961390 intergenic not near genes chr2L_5_21960001 chr2L_21960001 RAL-109_125b 1198 chr2L 21981645 21981710 chr2L 21990860 21990877 roo 27 9206 10.0 8.0 9.0 2.7 9232 chr2L 21981645 exon CG2528 - chr2L 21986261 intron CG2528 - chr2L 21990877 exon CG2528 - chr2L_27_21985001 chr2L_21985001 RAL-109_125b 1199 chr2L 22001634 22001670 chr2L 22001760 22001796 5 126 18.0 25.0 21.5 0.2 162 chr2L 22001634 intergenic not near genes chr2L 22001715 intergenic not near genes chr2L 22001796 intergenic not near genes chr2L_5_22000001 chr2L_22000001 RAL-109_125b 1200 chr2L 22037325 22037365 chr2L 22037677 22037717 6 352 15.5 9.5 12.5 0.4 392 chr2L 22037325 intergenic not near genes chr2L 22037521 intergenic CG41434 + chr2L 22037717 intergenic CG41434 + chr2L_6_22035001 chr2L_22035001 RAL-109_125b 1201 chr2L 22047206 22047257 chr2L 22047381 22047426 15 173 5.5 11.0 8.2 1.6 220 chr2L 22047206 intergenic not near genes chr2L 22047316 intergenic not near genes chr2L 22047426 intergenic not near genes chr2L_15_22045001 chr2L_22045001 RAL-109_125b 1202 chr2L 22077262 22077318 chr2L 22077393 22077449 11 131 14.5 19.0 16.8 0.6 187 chr2L 22077262 intergenic not near genes chr2L 22077356 intergenic not near genes chr2L 22077449 intergenic not near genes chr2L_11_22075001 chr2L_22075001 RAL-109_125b 1203 chr2L 22164928 22164978 chr2L 22165107 22165157 15 178 13.0 16.0 14.5 1.0 229 chr2L 22164928 3` UTR CG42748 + chr2L 22165042 3` UTR CG42748 + chr2L 22165157 3` UTR CG42748 + chr2L_15_22165001 chr2L_22165001 RAL-109_125b 1204 chr2L 22165478 22165534 chr2L 22165613 22165669 9 135 16.5 17.5 17.0 0.5 191 chr2L 22165478 3` UTR CG42748 + chr2L 22165574 3` UTR CG42748 + chr2L 22165669 3` UTR CG42748 + chr2L_9_22165001 chr2L_22165001 RAL-109_125b 1205 chr2L 22197846 22197900 chr2L 22198095 22198149 12 249 7.5 6.5 7.0 1.5 303 chr2L 22197846 intron Ir40a - chr2L 22197998 intron Ir40a - chr2L 22198149 intron Ir40a - chr2L_12_22195001 chr2L_22195001 RAL-109_125b 1206 chr2L 22212090 22212154 chr2L 22212687 22212751 9 596 15.5 20.0 17.8 0.5 661 chr2L 22212090 intron Ir40a - chr2L 22212420 intron Ir40a - chr2L 22212751 exon Ir40a - chr2L_9_22210001 chr2L_22210001 RAL-109_125b 1207 chr2L 22215871 22215927 chr2L 22216007 22216063 15 136 26.5 23.0 24.8 0.6 192 chr2L 22215871 intergenic not near genes chr2L 22215967 intergenic not near genes chr2L 22216063 intergenic not near genes chr2L_15_22215001 chr2L_22215001 RAL-109_125b 1208 chr2L 22228099 22228120 chr2L 22228225 22228251 10 125 27.0 21.5 24.2 0.4 152 chr2L 22228099 intergenic not near genes chr2L 22228175 intergenic not near genes chr2L 22228251 intergenic not near genes chr2L_10_22225001 chr2L_22225001 RAL-109_125b 1209 chr2L 22239402 22239447 chr2L 22239508 22239517 13 117 17.5 21.5 19.5 0.6 115 chr2L 22239402 intron CR43765 - chr2L 22239460 3` UTR CR43765 - chr2L 22239517 3` UTR CR43765 - chr2L_13_22235001 chr2L_22235001 RAL-109_125b 1210 chr2L 22258589 22258629 chr2L 22260753 22260793 G6 11 2172 7.5 18.5 13.0 0.8 2204 chr2L 22258589 intergenic Tif-IA + chr2L 22259691 intergenic not near genes chr2L 22260793 intergenic not near genes chr2L_11_22255001 chr2L_22255001 RAL-109_125b 1211 chr2L 22312366 22312418 chr2L 22312503 22312555 10 137 23.0 20.5 21.8 0.4 189 chr2L 22312366 intron CG17018 + chr2L 22312460 intron CG17018 + chr2L 22312555 intron CG17018 + chr2L_10_22310001 chr2L_22310001 RAL-109_125b 1212 chr2L 22515105 22515129 chr2L 22522605 22522629 HMS-Beagle2 6 7500 22.5 10.5 16.5 0.3 7524 chr2L 22515105 intergenic not near genes chr2L 22518867 intergenic not near genes chr2L 22522629 intergenic not near genes chr2L_6_22515001 chr2L_22515001 RAL-109_125b 1213 chr2L 22548889 22548934 chr2L 22550137 22550193 1360 7 1265 0.0 11.0 5.5 1.1 1304 chr2L 22548889 intergenic CG17490 + chr2L 22549541 intergenic not near genes chr2L 22550193 intergenic CG17493 + chr2L_7_22545001 chr2L_22545001 RAL-109_125b 1214 chr2L 22558114 22558171 chr2L 22558221 22558270 4 110 21.5 18.5 20.0 0.2 156 chr2L 22558114 intergenic not near genes chr2L 22558192 intergenic not near genes chr2L 22558270 intergenic not near genes chr2L_4_22555001 chr2L_22555001 RAL-109_125b 1215 chr2L 22558345 22558387 chr2L 22558706 22558747 5 361 24.0 25.5 24.8 0.2 402 chr2L 22558345 intergenic not near genes chr2L 22558546 intergenic not near genes chr2L 22558747 intergenic not near genes chr2L_5_22555001 chr2L_22555001 RAL-109_125b 1216 chr2L 22558394 22558410 chr2L 22558703 22558770 5 349 24.0 24.5 24.2 0.2 376 chr2L 22558394 intergenic not near genes chr2L 22558582 intergenic not near genes chr2L 22558770 intergenic not near genes chr2L_5_22555001 chr2L_22555001 RAL-109_125b 1217 chr2L 22581934 22582001 chr2L 22583761 22583841 S-element 17 1839 5.5 7.5 6.5 2.3 1907 chr2L 22581934 intron CG17494 + chr2L 22582888 intron CG17494 + chr2L 22583841 intron CG17494 + chr2L_17_22580001 chr2L_22580001 RAL-109_125b 1218 chr2L 22719391 22719436 chr2L 22727564 22727593 gypsy2 9 8171 21.5 19.5 20.5 0.4 8202 chr2L 22719391 intron CG40006 - chr2L 22723492 intron CG40006 - chr2L 22727593 intron CG40006 - chr2L_9_22720001 chr2L_22720001 RAL-109_125b 1219 chr2L 22747574 22747601 chr2L 22749464 22749510 5 1883 40.5 34.0 37.2 0.1 1936 chr2L 22747574 intron CG40006 - chr2L 22748542 intron CG40006 - chr2L 22749510 intron CG40006 - chr2L_5_22745001 chr2L_22745001 RAL-109_125b 1220 chr2L 22776379 22776446 chr2L 22778218 22778285 S-element 22 1839 6.5 5.0 5.8 3.2 1906 chr2L 22776379 intergenic not near genes chr2L 22777332 intergenic not near genes chr2L 22778285 intergenic not near genes chr2L_22_22775001 chr2L_22775001 RAL-109_125b 1221 chr2L 22941202 22941277 chr2L 22941334 22941408 15 131 17.5 20.0 18.8 0.8 206 chr2L 22941202 3` UTR lt + chr2L 22941305 3` UTR lt + chr2L 22941408 3` UTR lt + chr2L_15_22940001 chr2L_22940001 RAL-109_125b 1222 chr2L 22981035 22981077 chr2L 22981170 22981180 4 127 19.5 16.5 18.0 0.2 145 chr2L 22981035 intergenic not near genes chr2L 22981108 intergenic not near genes chr2L 22981180 intergenic not near genes chr2L_4_22980001 chr2L_22980001 RAL-109_125b 1223 chr2L 22983906 22983956 chr2L 22984017 22984082 5 119 15.0 18.0 16.5 0.3 176 chr2L 22983906 intron cta + chr2L 22983994 intron cta + chr2L 22984082 intron cta + chr2L_5_22980001 chr2L_22980001 RAL-109_125b 1224 chr2L 23006462 23006529 chr2L 23007188 23007255 Osvaldo 13 723 18.5 18.0 18.2 0.7 793 chr2L 23006462 intron Cht3 - chr2L 23006858 intron Cht3 - chr2L 23007255 intron Cht3 - chr2L_13_23005001 chr2L_23005001 RAL-109_125b 1225 chr2L 23020477 23020498 chr2L 23020593 23020624 4 124 21.0 18.5 19.8 0.2 147 chr2L 23020477 intron Cht3 - chr2L 23020550 intron Cht3 - chr2L 23020624 intron Cht3 - chr2L_4_23020001 chr2L_23020001 RAL-109_125b 1226 chr2R 469918 469951 chr2R 473209 473210 F-element 5 3280 3.5 6.0 4.8 0.9 3292 chr2R 469918 intergenic not near genes chr2R 471564 intergenic not near genes chr2R 473210 intergenic not near genes chr2R_5_470001 chr2R_470001 RAL-109_125b 1227 chr2R 529320 529342 chr2R 537977 538010 Max-element 9 8672 6.5 9.5 8.0 1.0 8690 chr2R 529320 intron CG40378 + chr2R 533665 intron CG40378 + chr2R 538010 intron CG40378 + chr2R_9_530001 chr2R_530001 RAL-109_125b 1228 chr2R 529343 529345 chr2R 537968 537995 Max-element 5 8655 6.0 8.0 7.0 0.6 8652 chr2R 529343 intron CG40378 + chr2R 533669 intron CG40378 + chr2R 537995 intron CG40378 + chr2R_5_530001 chr2R_530001 RAL-109_125b 1229 chr2R 552738 552770 chr2R 553985 553998 1360 4 1243 8.5 15.5 12.0 0.3 1260 chr2R 552738 intron CG40378 + chr2R 553368 intron CG40378 + chr2R 553998 intron CG40378 + chr2R_4_550001 chr2R_550001 RAL-109_125b 1230 chr2R 1317806 1317852 chr2R 1318152 1318210 11 351 40.0 34.0 37.0 0.3 404 chr2R 1317806 intergenic not near genes chr2R 1318008 intergenic not near genes chr2R 1318210 intergenic not near genes chr2R_11_1315001 chr2R_1315001 RAL-109_125b 1231 chr2R 1365841 1365881 chr2R 1366000 1366043 6 162 22.0 20.5 21.2 0.3 202 chr2R 1365841 intron l(2)41Ab + chr2R 1365942 intron l(2)41Ab + chr2R 1366043 intron l(2)41Ab + chr2R_6_1365001 chr2R_1365001 RAL-109_125b 1232 chr2R 1516569 1516578 chr2R 1521342 1521356 1731 8 4777 58.0 30.0 44.0 0.2 4787 chr2R 1516569 exon Maf1 - chr2R 1518962 intron Maf1 - chr2R 1521356 5` UTR Maf1 - chr2R_8_1515001 chr2R_1515001 RAL-109_125b 1233 chr2R 1516579 1516603 chr2R 1521334 1521381 1731 24 4776 48.5 28.0 38.2 0.6 4802 chr2R 1516579 exon Maf1 - chr2R 1518980 intron Maf1 - chr2R 1521381 5` UTR Maf1 - chr2R_24_1515001 chr2R_1515001 RAL-109_125b 1234 chr2R 1755900 1755974 chr2R 1756064 1756083 5 153 10.5 12.0 11.2 0.4 183 chr2R 1755900 intron CG41520 + chr2R 1755992 intron CG41520 + chr2R 1756083 intron CG41520 + chr2R_5_1755001 chr2R_1755001 RAL-109_125b 1235 chr2R 1919583 1919636 chr2R 1920009 1920063 7 427 21.5 18.5 20.0 0.3 480 chr2R 1919583 intron CG17684 - chr2R 1919823 intron CG17684 - chr2R 1920063 intron CG17684 - chr2R_7_1915001 chr2R_1915001 RAL-109_125b 1236 chr2R 2015093 2015149 chr2R 2015220 2015276 6 127 11.5 11.5 11.5 0.5 183 chr2R 2015093 intron CG17684 - chr2R 2015184 intron CG17684 - chr2R 2015276 intron CG17684 - chr2R_6_2015001 chr2R_2015001 RAL-109_125b 1237 chr2R 2110461 2110501 chr2R 2118069 2118109 17.6 6 7608 16.0 13.5 14.8 0.4 7648 chr2R 2110461 intron CG17684 - chr2R 2114285 intron CG17684 - chr2R 2118109 intron CG17684 - chr2R_6_2110001 chr2R_2110001 RAL-109_125b 1238 chr2R 2498945 2499007 chr2R 2508142 2508204 roo 20 9193 7.5 6.0 6.8 2.6 9259 chr2R 2498945 intron MFS17 - chr2R 2503574 intron MFS17 - chr2R 2508204 intron MFS17 - chr2R_20_2500001 chr2R_2500001 RAL-109_125b 1239 chr2R 2508274 2508296 chr2R 2508461 2508484 4 188 17.0 20.0 18.5 0.2 210 chr2R 2508274 intron MFS17 - chr2R 2508379 intron MFS17 - chr2R 2508484 intron MFS17 - chr2R_4_2505001 chr2R_2505001 RAL-109_125b 1240 chr2R 2875336 2875390 chr2R 2878901 2878931 HMS-Beagle 5 3556 18.0 12.5 15.2 0.3 3595 chr2R 2875336 intergenic not near genes chr2R 2877134 intergenic not near genes chr2R 2878931 intergenic not near genes chr2R_5_2875001 chr2R_2875001 RAL-109_125b 1241 chr2R 3107702 3107748 chr2R 3108436 3108482 5 734 11.0 15.0 13.0 0.4 780 chr2R 3107702 intron CG42596 + chr2R 3108092 intron CG42596 + chr2R 3108482 intron CG42596 + chr2R_5_3105001 chr2R_3105001 RAL-109_125b 1242 chr2R 3144044 3144104 chr2R 3393372 3393432 Doc 13 249323 21.0 20.0 20.5 0.6 249388 chr2R 3144044 intron CG42596 + chr2R 3268738 intergenic not near genes chr2R 3393432 intergenic not near genes chr2R_13_3265001 chr2R_3265001 RAL-109_125b 1243 chr2R 3292053 3292103 chr2R 3915263 3915304 F-element 5 623206 14.5 29.5 22.0 0.2 623251 chr2R 3292053 intergenic not near genes chr2R 3603678 intergenic not near genes chr2R 3915304 intron uex - chr2R_5_3600001 chr2R_3600001 RAL-109_125b 1244 chr2R 3515246 3515305 chr2R 3515384 3515443 11 137 27.0 26.0 26.5 0.4 197 chr2R 3515246 intergenic not near genes chr2R 3515344 intergenic not near genes chr2R 3515443 intergenic not near genes chr2R_11_3515001 chr2R_3515001 RAL-109_125b 1245 chr2R 3532571 3532633 chr2R 3536064 3536126 Doc 12 3491 4.0 7.0 5.5 1.8 3555 chr2R 3532571 intergenic not near genes chr2R 3534348 intergenic not near genes chr2R 3536126 intergenic not near genes chr2R_12_3530001 chr2R_3530001 RAL-109_125b 1246 chr2R 4604509 4604544 chr2R 4604638 4604673 10 129 12.5 9.0 10.8 0.8 164 chr2R 4604509 intron p120ctn + chr2R 4604591 intron p120ctn + chr2R 4604673 intron p120ctn + chr2R_10_4600001 chr2R_4600001 RAL-109_125b 1247 chr2R 4604547 4604582 chr2R 4604636 4604671 16 113 5.5 8.5 7.0 2.0 124 chr2R 4604547 intron p120ctn + chr2R 4604609 intron p120ctn + chr2R 4604671 intron p120ctn + chr2R_16_4600001 chr2R_4600001 RAL-109_125b 1248 chr2R 4617903 4617938 chr2R 4618225 4618260 4 322 4.5 18.5 11.5 0.3 357 chr2R 4617903 intergenic not near genes chr2R 4618082 intergenic not near genes chr2R 4618260 intergenic not near genes chr2R_4_4615001 chr2R_4615001 RAL-109_125b 1249 chr2R 4622913 4622976 chr2R 4624122 4624185 1360 19 1207 17.0 21.0 19.0 0.9 1272 chr2R 4622913 intergenic CR44101 - chr2R 4623549 intergenic not near genes chr2R 4624185 intergenic not near genes chr2R_19_4620001 chr2R_4620001 RAL-109_125b 1250 chr2R 4624608 4624661 chr2R 4626563 4626600 Bica 19 1951 22.0 26.5 24.2 0.8 1992 chr2R 4624608 intergenic not near genes chr2R 4625604 intergenic not near genes chr2R 4626600 intergenic not near genes chr2R_19_4625001 chr2R_4625001 RAL-109_125b 1251 chr2R 4634166 4634177 chr2R 4634295 4634306 4 129 21.5 31.5 26.5 0.1 140 chr2R 4634166 intergenic not near genes chr2R 4634236 intergenic not near genes chr2R 4634306 intergenic not near genes chr2R_4_4630001 chr2R_4630001 RAL-109_125b 1252 chr2R 4702457 4702503 chr2R 4702645 4702691 11 187 21.0 20.5 20.8 0.5 234 chr2R 4702457 intron Nipped-B - chr2R 4702574 intron Nipped-B - chr2R 4702691 intron Nipped-B - chr2R_11_4700001 chr2R_4700001 RAL-109_125b 1253 chr2R 4783199 4783267 chr2R 4783383 4783450 13 183 22.0 23.5 22.8 0.5 251 chr2R 4783199 intergenic not near genes chr2R 4783324 intergenic not near genes chr2R 4783450 intergenic not near genes chr2R_13_4780001 chr2R_4780001 RAL-109_125b 1254 chr2R 4821198 4821239 chr2R 4821334 4821375 13 133 12.0 18.5 15.2 0.8 177 chr2R 4821198 intron CG17528 - chr2R 4821286 intron CG17528 - chr2R 4821375 intron CG17528 - chr2R_13_4820001 chr2R_4820001 RAL-109_125b 1255 chr2R 4825123 4825123 chr2R 22311215 22311217 5 17486093 32.0 19.0 25.5 0.2 17486094 chr2R 4825123 intergenic not near genes chr2R 13568170 intergenic not near genes chr2R 22311217 intron wdp - chr2R_5_13565001 chr2R_13565001 RAL-109_125b 1256 chr2R 4838837 4838899 chr2R 4840410 4840472 transib2 9 1573 21.5 22.5 22.0 0.4 1635 chr2R 4838837 intergenic not near genes chr2R 4839654 intergenic not near genes chr2R 4840472 intergenic not near genes chr2R_9_4835001 chr2R_4835001 RAL-109_125b 1257 chr2R 4916067 4916129 chr2R 4916195 4916263 21 130 7.5 3.5 5.5 3.2 196 chr2R 4916067 intergenic not near genes chr2R 4916165 intergenic not near genes chr2R 4916263 intergenic not near genes chr2R_21_4915001 chr2R_4915001 RAL-109_125b 1258 chr2R 4933366 4933381 chr2R 4933948 4933990 4 604 16.0 16.0 16.0 0.2 624 chr2R 4933366 intron Ir41a + chr2R 4933678 intron Ir41a + chr2R 4933990 intron Ir41a + chr2R_4_4930001 chr2R_4930001 RAL-109_125b 1259 chr2R 4938466 4938523 chr2R 4938652 4938709 15 185 21.5 22.0 21.8 0.7 243 chr2R 4938466 intron Ir41a + chr2R 4938588 intron Ir41a + chr2R 4938709 intron Ir41a + chr2R_15_4935001 chr2R_4935001 RAL-109_125b 1260 chr2R 4940921 4940987 chr2R 4943421 4943486 5 2500 17.5 44.5 31.0 0.2 2565 chr2R 4940921 intron Ir41a + chr2R 4942204 intron Ir41a + chr2R 4943486 intron Ir41a + chr2R_5_4940001 chr2R_4940001 RAL-109_125b 1261 chr2R 5038483 5038509 chr2R 5039330 5039339 4 840 24.5 13.0 18.8 0.2 856 chr2R 5038483 intergenic not near genes chr2R 5038911 intergenic not near genes chr2R 5039339 intergenic not near genes chr2R_4_5035001 chr2R_5035001 RAL-109_125b 1262 chr2R 5040748 5040762 chr2R 5041287 5041295 7 538 12.5 16.5 14.5 0.5 547 chr2R 5040748 intergenic not near genes chr2R 5041022 intergenic not near genes chr2R 5041295 intergenic not near genes chr2R_7_5040001 chr2R_5040001 RAL-109_125b 1263 chr2R 5074810 5074840 chr2R 5074999 5075055 4 208 20.0 22.0 21.0 0.2 245 chr2R 5074810 intergenic not near genes chr2R 5074932 intergenic not near genes chr2R 5075055 intergenic not near genes chr2R_4_5070001 chr2R_5070001 RAL-109_125b 1264 chr2R 5075216 5075362 chr2R 5075757 5075828 18 519 15.5 22.0 18.8 0.9 612 chr2R 5075216 intergenic not near genes chr2R 5075522 intergenic not near genes chr2R 5075828 intergenic not near genes chr2R_18_5075001 chr2R_5075001 RAL-109_125b 1265 chr2R 5080765 5080815 chr2R 5080887 5080956 14 135 7.0 6.5 6.8 1.8 191 chr2R 5080765 intergenic not near genes chr2R 5080860 intergenic not near genes chr2R 5080956 intergenic not near genes chr2R_14_5080001 chr2R_5080001 RAL-109_125b 1266 chr2R 5102905 5102911 chr2R 5103033 5103037 4 128 24.5 19.0 21.8 0.2 132 chr2R 5102905 intergenic not near genes chr2R 5102971 intergenic not near genes chr2R 5103037 intergenic not near genes chr2R_4_5100001 chr2R_5100001 RAL-109_125b 1267 chr2R 5102913 5102956 chr2R 5103029 5103084 10 127 22.0 19.0 20.5 0.5 171 chr2R 5102913 intergenic not near genes chr2R 5102998 intergenic not near genes chr2R 5103084 intergenic not near genes chr2R_10_5100001 chr2R_5100001 RAL-109_125b 1268 chr2R 5117884 5117918 chr2R 5118344 5118378 INE-1 13 459 14.5 20.5 17.5 0.7 494 chr2R 5117884 intron gus - chr2R 5118131 intron gus - chr2R 5118378 intron gus - chr2R_13_5115001 chr2R_5115001 RAL-109_125b 1269 chr2R 5125198 5125261 chr2R 5125566 5125628 8 367 14.5 7.5 11.0 0.7 430 chr2R 5125198 intron gus - chr2R 5125413 intron gus - chr2R 5125628 intron gus - chr2R_8_5125001 chr2R_5125001 RAL-109_125b 1270 chr2R 5139992 5140042 chr2R 5140135 5140211 12 162 16.5 9.5 13.0 0.9 219 chr2R 5139992 intergenic not near genes chr2R 5140102 intergenic not near genes chr2R 5140211 intergenic not near genes chr2R_12_5140001 chr2R_5140001 RAL-109_125b 1271 chr2R 5237301 5237332 chr2R 5237433 5237464 6 131 24.0 21.5 22.8 0.3 163 chr2R 5237301 intron Nipped-A - chr2R 5237382 intron Nipped-A - chr2R 5237464 intron Nipped-A - chr2R_6_5235001 chr2R_5235001 RAL-109_125b 1272 chr2R 5363462 5363504 chr2R 5363590 5363632 11 128 27.5 27.0 27.2 0.4 170 chr2R 5363462 5` UTR CR42646 + chr2R 5363547 intron CR42646 + chr2R 5363632 intron CR42646 + chr2R_11_5360001 chr2R_5360001 RAL-109_125b 1273 chr2R 5417952 5418019 chr2R 5420634 5420701 Burdock 32 2681 10.0 13.5 11.8 2.5 2749 chr2R 5417952 intron laccase2 + chr2R 5419326 intron laccase2 + chr2R 5420701 intron laccase2 + chr2R_32_5415001 chr2R_5415001 RAL-109_125b 1274 chr2R 5472324 5472368 chr2R 5472467 5472499 16 141 17.5 22.0 19.8 0.8 175 chr2R 5472324 intron CG30440 - chr2R 5472412 intron CG30440 - chr2R 5472499 intron CG30440 - chr2R_16_5470001 chr2R_5470001 RAL-109_125b 1275 chr2R 5475556 5475594 chr2R 5475700 5475738 6 144 7.5 15.5 11.5 0.5 182 chr2R 5475556 intron CG30440 - chr2R 5475647 intron CG30440 - chr2R 5475738 intron CG30440 - chr2R_6_5475001 chr2R_5475001 RAL-109_125b 1276 chr2R 5491683 5491734 chr2R 5491871 5491925 8 189 14.0 22.5 18.2 0.4 242 chr2R 5491683 intron CG30440 - chr2R 5491804 intron CG30440 - chr2R 5491925 intron CG30440 - chr2R_8_5490001 chr2R_5490001 RAL-109_125b 1277 chr2R 5503508 5503565 chr2R 5503638 5503695 15 129 12.0 9.0 10.5 1.3 187 chr2R 5503508 intron,3` UTR CG30438 +,TpnC4 - chr2R 5503602 intron,3` UTR CG30438 +,TpnC4 - chr2R 5503695 intron,intron CG30438 +,TpnC4 - chr2R_15_5500001 chr2R_5500001 RAL-109_125b 1278 chr2R 5509505 5509523 chr2R 5509651 5509669 4 146 20.5 22.0 21.2 0.2 164 chr2R 5509505 intron CG30438 + chr2R 5509587 intron CG30438 + chr2R 5509669 intron CG30438 + chr2R_4_5505001 chr2R_5505001 RAL-109_125b 1279 chr2R 5509529 5509545 chr2R 5509629 5509691 6 133 18.0 21.0 19.5 0.3 162 chr2R 5509529 intron CG30438 + chr2R 5509610 intron CG30438 + chr2R 5509691 intron CG30438 + chr2R_6_5505001 chr2R_5505001 RAL-109_125b 1280 chr2R 5543203 5543214 chr2R 5547337 5547348 invader1 4 4134 14.5 19.0 16.8 0.2 4145 chr2R 5543203 intron CG30438 + chr2R 5545276 intron CG30438 + chr2R 5547348 intron CG30438 + chr2R_4_5545001 chr2R_5545001 RAL-109_125b 1281 chr2R 5620992 5621049 chr2R 5621169 5621177 15 180 17.0 19.5 18.2 0.8 185 chr2R 5620992 intergenic not near genes chr2R 5621084 intergenic not near genes chr2R 5621177 intergenic not near genes chr2R_15_5620001 chr2R_5620001 RAL-109_125b 1282 chr2R 5621330 5621396 chr2R 5621460 5621526 9 126 27.5 24.5 26.0 0.3 196 chr2R 5621330 intergenic not near genes chr2R 5621428 intergenic not near genes chr2R 5621526 intergenic not near genes chr2R_9_5620001 chr2R_5620001 RAL-109_125b 1283 chr2R 5639979 5640039 chr2R 5640103 5640160 14 121 19.0 25.5 22.2 0.6 181 chr2R 5639979 intergenic not near genes chr2R 5640070 intergenic not near genes chr2R 5640160 intergenic not near genes chr2R_14_5640001 chr2R_5640001 RAL-109_125b 1284 chr2R 5640444 5640485 chr2R 5640564 5640626 7 137 24.0 26.5 25.2 0.3 182 chr2R 5640444 intergenic CG11665 - chr2R 5640535 intergenic CG11665 - chr2R 5640626 intergenic CG11665 - chr2R_7_5640001 chr2R_5640001 RAL-109_125b 1285 chr2R 5646995 5647052 chr2R 5649514 5649536 INE-1 9 2507 37.0 33.0 35.0 0.2 2541 chr2R 5646995 intron CG11665 - chr2R 5648266 intron CG11665 - chr2R 5649536 intron CG11665 - chr2R_9_5645001 chr2R_5645001 RAL-109_125b 1286 chr2R 5655377 5655437 chr2R 5655507 5655548 18 123 29.0 29.0 29.0 0.6 171 chr2R 5655377 exon CG1344 + chr2R 5655462 exon CG1344 + chr2R 5655548 exon CG1344 + chr2R_18_5655001 chr2R_5655001 RAL-109_125b 1287 chr2R 5655829 5655897 chr2R 5655967 5656021 14 136 7.0 7.5 7.2 1.7 192 chr2R 5655829 3` UTR CG1344 + chr2R 5655925 3` UTR CG1344 + chr2R 5656021 3` UTR CG1344 + chr2R_14_5655001 chr2R_5655001 RAL-109_125b 1288 chr2R 5701708 5701763 chr2R 5701837 5701875 11 123 19.5 21.0 20.2 0.5 167 chr2R 5701708 intergenic vlc + chr2R 5701792 intergenic vlc + chr2R 5701875 intergenic vlc + chr2R_11_5700001 chr2R_5700001 RAL-109_125b 1289 chr2R 5724947 5725014 chr2R 5725227 5725294 16 279 18.0 18.0 18.0 0.8 347 chr2R 5724947 intron ap - chr2R 5725120 intron ap - chr2R 5725294 intron ap - chr2R_16_5725001 chr2R_5725001 RAL-109_125b 1290 chr2R 5750409 5750451 chr2R 5750545 5750593 15 137 11.5 6.0 8.8 1.5 184 chr2R 5750409 intergenic not near genes chr2R 5750501 intergenic not near genes chr2R 5750593 intergenic not near genes chr2R_15_5750001 chr2R_5750001 RAL-109_125b 1291 chr2R 5772476 5772495 chr2R 5772605 5772624 7 129 16.5 4.0 10.2 0.6 148 chr2R 5772476 3` UTR Gp210 + chr2R 5772550 3` UTR Gp210 + chr2R 5772624 3` UTR Gp210 + chr2R_7_5770001 chr2R_5770001 RAL-109_125b 1292 chr2R 5772497 5772728 chr2R 5772603 5772891 33 138 16.0 4.0 10.0 3.0 394 chr2R 5772497 3` UTR Gp210 + chr2R 5772694 3` UTR Gp210 + chr2R 5772891 3` UTR Gp210 + chr2R_33_5770001 chr2R_5770001 RAL-109_125b 1293 chr2R 5800230 5800269 chr2R 5800371 5800410 10 141 18.0 21.0 19.5 0.5 180 chr2R 5800230 intergenic not near genes chr2R 5800320 intergenic not near genes chr2R 5800410 intergenic not near genes chr2R_10_5800001 chr2R_5800001 RAL-109_125b 1294 chr2R 5861242 5861313 chr2R 5861413 5861479 9 165 18.0 17.0 17.5 0.5 237 chr2R 5861242 intergenic dpr12 + chr2R 5861360 intergenic not near genes chr2R 5861479 intergenic not near genes chr2R_9_5860001 chr2R_5860001 RAL-109_125b 1295 chr2R 5867995 5868091 chr2R 5868183 5868261 12 163 11.5 18.5 15.0 0.8 266 chr2R 5867995 intergenic not near genes chr2R 5868128 intergenic not near genes chr2R 5868261 intergenic not near genes chr2R_12_5865001 chr2R_5865001 RAL-109_125b 1296 chr2R 5869237 5869286 chr2R 5874362 5874412 flea 22 5124 11.0 12.0 11.5 1.8 5175 chr2R 5869237 intergenic not near genes chr2R 5871824 intergenic not near genes chr2R 5874412 intergenic not near genes chr2R_22_5870001 chr2R_5870001 RAL-109_125b 1297 chr2R 5869287 5869299 chr2R 5874352 5874425 flea 6 5115 9.5 9.0 9.2 0.6 5138 chr2R 5869287 intergenic not near genes chr2R 5871856 intergenic not near genes chr2R 5874425 intergenic not near genes chr2R_6_5870001 chr2R_5870001 RAL-109_125b 1298 chr2R 5878883 5878950 chr2R 5879003 5879080 20 125 3.5 4.0 3.8 4.2 197 chr2R 5878883 intergenic CG44438 - chr2R 5878982 intergenic CG44438 - chr2R 5879080 intergenic CG44438 - chr2R_20_5875001 chr2R_5875001 RAL-109_125b 1299 chr2R 5885200 5885213 chr2R 5885333 5885346 4 132 26.5 9.5 18.0 0.2 146 chr2R 5885200 5` UTR CR44125 + chr2R 5885273 5` UTR CR44125 + chr2R 5885346 5` UTR CR44125 + chr2R_4_5885001 chr2R_5885001 RAL-109_125b 1300 chr2R 5885215 5885378 chr2R 5885318 5885557 29 165 3.5 12.5 8.0 3.2 342 chr2R 5885215 5` UTR CR44125 + chr2R 5885386 5` UTR CR44125 + chr2R 5885557 5` UTR CR44125 + chr2R_29_5885001 chr2R_5885001 RAL-109_125b 1301 chr2R 5902115 5902178 chr2R 5909724 5909787 17.6 10 7605 6.0 7.0 6.5 1.3 7672 chr2R 5902115 5` UTR CG43366 + chr2R 5905951 intron CG43366 + chr2R 5909787 intron CG43366 + chr2R_10_5905001 chr2R_5905001 RAL-109_125b 1302 chr2R 5914480 5914484 chr2R 5914711 5914715 4 231 30.0 18.0 24.0 0.2 235 chr2R 5914480 intron CG43366 + chr2R 5914598 intron CG43366 + chr2R 5914715 intron CG43366 + chr2R_4_5910001 chr2R_5910001 RAL-109_125b 1303 chr2R 5914496 5914548 chr2R 5914703 5914779 15 226 25.5 16.0 20.8 0.7 283 chr2R 5914496 intron CG43366 + chr2R 5914638 intron CG43366 + chr2R 5914779 intron CG43366 + chr2R_15_5910001 chr2R_5910001 RAL-109_125b 1304 chr2R 5932749 5932797 chr2R 5932878 5932921 10 128 19.0 21.5 20.2 0.5 172 chr2R 5932749 intergenic not near genes chr2R 5932835 intergenic not near genes chr2R 5932921 intergenic not near genes chr2R_10_5930001 chr2R_5930001 RAL-109_125b 1305 chr2R 5933043 5933111 chr2R 5933316 5933390 11 271 17.5 19.5 18.5 0.6 347 chr2R 5933043 intergenic not near genes chr2R 5933216 intergenic not near genes chr2R 5933390 intergenic not near genes chr2R_11_5930001 chr2R_5930001 RAL-109_125b 1306 chr2R 5939624 5939661 chr2R 5940871 5940908 INE-1 6 1247 16.5 20.0 18.2 0.3 1284 chr2R 5939624 intergenic not near genes chr2R 5940266 intergenic not near genes chr2R 5940908 intergenic not near genes chr2R_6_5940001 chr2R_5940001 RAL-109_125b 1307 chr2R 5952890 5953089 chr2R 5953018 5953166 8 121 9.0 20.0 14.5 0.5 276 chr2R 5952890 intergenic not near genes chr2R 5953028 intergenic not near genes chr2R 5953166 intergenic not near genes chr2R_8_5950001 chr2R_5950001 RAL-109_125b 1308 chr2R 5957007 5957049 chr2R 5957139 5957181 6 132 14.5 15.5 15.0 0.4 174 chr2R 5957007 intergenic not near genes chr2R 5957094 intergenic not near genes chr2R 5957181 intergenic CG7882 + chr2R_6_5955001 chr2R_5955001 RAL-109_125b 1309 chr2R 6015688 6015755 chr2R 6015814 6015886 12 129 17.0 23.5 20.2 0.6 198 chr2R 6015688 5` UTR Act42A - chr2R 6015787 intergenic Act42A - chr2R 6015886 intergenic Act42A - chr2R_12_6015001 chr2R_6015001 RAL-109_125b 1310 chr2R 6033417 6033473 chr2R 6033552 6033585 11 129 26.0 28.5 27.2 0.4 168 chr2R 6033417 intron SCAP - chr2R 6033501 intron SCAP - chr2R 6033585 intron SCAP - chr2R_11_6030001 chr2R_6030001 RAL-109_125b 1311 chr2R 6050263 6050334 chr2R 6050406 6050473 12 140 11.5 0.0 5.8 1.8 210 chr2R 6050263 intron CG34212 - chr2R 6050368 intergenic CG34212 - chr2R 6050473 intergenic CG34212 -,CCHa2-R + chr2R_12_6050001 chr2R_6050001 RAL-109_125b 1312 chr2R 6065709 6065780 chr2R 6065871 6065921 13 151 17.0 13.5 15.2 0.8 212 chr2R 6065709 intron CCHa2-R + chr2R 6065815 intron CCHa2-R + chr2R 6065921 exon CCHa2-R + chr2R_13_6065001 chr2R_6065001 RAL-109_125b 1313 chr2R 6088320 6088388 chr2R 6088463 6088531 37 141 7.5 9.5 8.5 3.9 211 chr2R 6088320 intergenic not near genes chr2R 6088426 intergenic not near genes chr2R 6088531 intergenic not near genes chr2R_37_6085001 chr2R_6085001 RAL-109_125b 1314 chr2R 6096676 6096722 chr2R 6101924 6101970 BS 16 5239 16.0 13.0 14.5 1.0 5294 chr2R 6096676 intron EcR - chr2R 6099323 intron EcR - chr2R 6101970 intron EcR - chr2R_16_6095001 chr2R_6095001 RAL-109_125b 1315 chr2R 6126901 6126933 chr2R 6127059 6127091 11 158 27.0 23.0 25.0 0.4 190 chr2R 6126901 intron EcR - chr2R 6126996 intron EcR - chr2R 6127091 intron EcR - chr2R_11_6125001 chr2R_6125001 RAL-109_125b 1316 chr2R 6126938 6126964 chr2R 6127055 6127122 16 151 21.0 22.5 21.8 0.7 184 chr2R 6126938 intron EcR - chr2R 6127030 intron EcR - chr2R 6127122 intron EcR - chr2R_16_6125001 chr2R_6125001 RAL-109_125b 1317 chr2R 6129280 6129351 chr2R 6129408 6129479 16 126 27.5 22.0 24.8 0.6 199 chr2R 6129280 intron EcR - chr2R 6129380 intron EcR - chr2R 6129479 intron EcR - chr2R_16_6125001 chr2R_6125001 RAL-109_125b 1318 chr2R 6168160 6168218 chr2R 6168291 6168350 9 131 15.0 19.0 17.0 0.5 190 chr2R 6168160 intron EcR - chr2R 6168255 intron EcR - chr2R 6168350 intron EcR - chr2R_9_6165001 chr2R_6165001 RAL-109_125b 1319 chr2R 6178073 6178141 chr2R 6178249 6178317 27 175 4.5 4.5 4.5 4.9 244 chr2R 6178073 intergenic not near genes chr2R 6178195 intergenic not near genes chr2R 6178317 intergenic not near genes chr2R_27_6175001 chr2R_6175001 RAL-109_125b 1320 chr2R 6178645 6178707 chr2R 6178771 6178844 12 136 22.0 22.0 22.0 0.5 199 chr2R 6178645 intergenic not near genes chr2R 6178744 intergenic not near genes chr2R 6178844 intergenic not near genes chr2R_12_6175001 chr2R_6175001 RAL-109_125b 1321 chr2R 6194639 6194690 chr2R 6194772 6194823 7 133 12.0 10.0 11.0 0.6 184 chr2R 6194639 intron Ptr - chr2R 6194731 intron Ptr - chr2R 6194823 intron Ptr - chr2R_7_6190001 chr2R_6190001 RAL-109_125b 1322 chr2R 6247763 6247837 chr2R 6247891 6247965 12 126 10.0 8.0 9.0 1.2 202 chr2R 6247763 intron Pld + chr2R 6247864 intron Pld + chr2R 6247965 intron Pld + chr2R_12_6245001 chr2R_6245001 RAL-109_125b 1323 chr2R 6494510 6494547 chr2R 6499313 6499359 F-element 11 4809 3.5 2.0 2.8 2.9 4849 chr2R 6494510 intergenic not near genes chr2R 6496934 intergenic not near genes chr2R 6499359 intergenic not near genes chr2R_11_6495001 chr2R_6495001 RAL-109_125b 1324 chr2R 6500921 6500985 chr2R 6501066 6501115 9 142 31.5 23.5 27.5 0.3 194 chr2R 6500921 intergenic not near genes chr2R 6501018 intergenic not near genes chr2R 6501115 intergenic not near genes chr2R_9_6500001 chr2R_6500001 RAL-109_125b 1325 chr2R 6530501 6530790 chr2R 6530684 6530920 22 151 16.5 14.0 15.2 1.4 419 chr2R 6530501 intron jing + chr2R 6530710 intron jing + chr2R 6530920 intron jing + chr2R_22_6530001 chr2R_6530001 RAL-109_125b 1326 chr2R 6538335 6538401 chr2R 6538463 6538484 19 123 20.5 21.0 20.8 0.9 149 chr2R 6538335 intron jing + chr2R 6538410 intron jing + chr2R 6538484 intron jing + chr2R_19_6535001 chr2R_6535001 RAL-109_125b 1327 chr2R 6539806 6539849 chr2R 6539970 6540014 12 165 24.0 31.5 27.8 0.4 208 chr2R 6539806 intron jing + chr2R 6539910 intron jing + chr2R 6540014 intron jing + chr2R_12_6535001 chr2R_6535001 RAL-109_125b 1328 chr2R 6579741 6579806 chr2R 6584874 6584943 flea 19 5136 7.0 4.5 5.8 2.8 5202 chr2R 6579741 intron jing + chr2R 6582342 intron jing + chr2R 6584943 intron jing + chr2R_19_6580001 chr2R_6580001 RAL-109_125b 1329 chr2R 6607618 6607626 chr2R 6607754 6607763 4 137 24.0 21.0 22.5 0.2 145 chr2R 6607618 intron jing + chr2R 6607690 intron jing + chr2R 6607763 intron jing + chr2R_4_6605001 chr2R_6605001 RAL-109_125b 1330 chr2R 6607632 6607690 chr2R 6607748 6607816 10 129 21.5 21.0 21.2 0.5 184 chr2R 6607632 intron jing + chr2R 6607724 intron jing + chr2R 6607816 intron jing + chr2R_10_6605001 chr2R_6605001 RAL-109_125b 1331 chr2R 6622100 6622160 chr2R 6622622 6622682 invader1 18 519 19.0 21.0 20.0 0.9 582 chr2R 6622100 intergenic not near genes chr2R 6622391 intergenic not near genes chr2R 6622682 intergenic not near genes chr2R_18_6620001 chr2R_6620001 RAL-109_125b 1332 chr2R 6633152 6633224 chr2R 6633279 6633347 19 126 11.5 12.0 11.8 1.5 195 chr2R 6633152 intergenic Vha16-1 -,Trap1 - chr2R 6633250 intergenic Vha16-1 -,Trap1 - chr2R 6633347 intergenic Vha16-1 -,Trap1 - chr2R_19_6630001 chr2R_6630001 RAL-109_125b 1333 chr2R 6699552 6699614 chr2R 6699687 6699749 10 135 14.5 16.0 15.2 0.6 197 chr2R 6699552 intergenic Rab2 + chr2R 6699650 intergenic Rab2 + chr2R 6699749 intergenic Rab2 +,CG3409 -,CG45092 - chr2R_10_6695001 chr2R_6695001 RAL-109_125b 1334 chr2R 6806741 6806816 chr2R 6806874 6806883 15 120 12.5 12.0 12.2 1.1 142 chr2R 6806741 intergenic not near genes chr2R 6806812 intergenic not near genes chr2R 6806883 intergenic not near genes chr2R_15_6805001 chr2R_6805001 RAL-109_125b 1335 chr2R 6952128 6952185 chr2R 6959758 6959815 opus 13 7629 5.5 6.5 6.0 1.9 7687 chr2R 6952128 intron,intron,exon mim -,CheB42c -,ppk25 + chr2R 6955972 intron,intron mim -,CheB42c - chr2R 6959815 intron,intron mim -,CheB42c - chr2R_13_6955001 chr2R_6955001 RAL-109_125b 1336 chr2R 7102611 7102671 chr2R 7102761 7102821 21 147 4.0 6.0 5.0 3.5 210 chr2R 7102611 intron esn + chr2R 7102716 intron esn + chr2R 7102821 intron esn + chr2R_21_7100001 chr2R_7100001 RAL-109_125b 1337 chr2R 7139859 7139953 chr2R 7141413 7141476 hopper2 4 1529 1.5 5.0 3.2 1.0 1617 chr2R 7139859 intergenic not near genes chr2R 7140668 intergenic not near genes chr2R 7141476 intergenic not near genes chr2R_4_7140001 chr2R_7140001 RAL-109_125b 1338 chr2R 7153122 7153129 chr2R 7153258 7153265 5 136 13.5 0.0 6.8 0.6 143 chr2R 7153122 intron,exon pk +,Spn43Ab - chr2R 7153194 intron,intron pk +,Spn43Ab - chr2R 7153265 intron,intron pk +,Spn43Ab - chr2R_5_7150001 chr2R_7150001 RAL-109_125b 1339 chr2R 7153135 7153181 chr2R 7153245 7153299 12 130 6.0 0.0 3.0 3.0 164 chr2R 7153135 intron,exon pk +,Spn43Ab - chr2R 7153217 intron,intron pk +,Spn43Ab - chr2R 7153299 intron,intron pk +,Spn43Ab - chr2R_12_7150001 chr2R_7150001 RAL-109_125b 1340 chr2R 7173740 7173812 chr2R 7174043 7174112 19 302 2.5 4.5 3.5 4.2 372 chr2R 7173740 intron pk + chr2R 7173926 intron pk + chr2R 7174112 intron pk + chr2R_19_7170001 chr2R_7170001 RAL-109_125b 1341 chr2R 7196531 7196571 chr2R 7201356 7201364 F-element 12 4822 8.5 0.0 4.2 2.3 4833 chr2R 7196531 intron pk + chr2R 7198948 intron pk + chr2R 7201364 intron pk + chr2R_12_7195001 chr2R_7195001 RAL-109_125b 1342 chr2R 7209849 7209866 chr2R 7217643 7217677 roo 5 7804 1.0 14.0 7.5 0.6 7828 chr2R 7209849 intron pk + chr2R 7213763 intron pk + chr2R 7217677 intron pk + chr2R_5_7210001 chr2R_7210001 RAL-109_125b 1343 chr2R 7235779 7235842 chr2R 7240921 7240978 jockey 16 5137 12.0 4.0 8.0 1.8 5199 chr2R 7235779 intergenic not near genes chr2R 7238378 intergenic not near genes chr2R 7240978 intergenic not near genes chr2R_16_7235001 chr2R_7235001 RAL-109_125b 1344 chr2R 7262157 7262208 chr2R 7269268 7269316 297 6 7106 6.0 10.5 8.2 0.7 7159 chr2R 7262157 intergenic not near genes chr2R 7265736 intergenic not near genes chr2R 7269316 intergenic not near genes chr2R_6_7265001 chr2R_7265001 RAL-109_125b 1345 chr2R 7290143 7290213 chr2R 7290295 7290365 24 150 5.0 4.5 4.8 4.1 222 chr2R 7290143 intron pwn + chr2R 7290254 intron pwn + chr2R 7290365 intron pwn + chr2R_24_7290001 chr2R_7290001 RAL-109_125b 1346 chr2R 7310722 7310791 chr2R 7310854 7310923 29 126 7.0 9.0 8.0 3.2 201 chr2R 7310722 intergenic not near genes chr2R 7310822 intergenic not near genes chr2R 7310923 intergenic CG12164 + chr2R_29_7310001 chr2R_7310001 RAL-109_125b 1347 chr2R 7328973 7328990 chr2R 7329112 7329129 6 139 7.5 11.0 9.2 0.6 156 chr2R 7328973 intron,intron Dscam1 -,CR45129 + chr2R 7329051 intron,intron Dscam1 -,CR45129 + chr2R 7329129 intron,intron Dscam1 -,CR45129 + chr2R_6_7325001 chr2R_7325001 RAL-109_125b 1348 chr2R 7328991 7329036 chr2R 7329102 7329162 17 132 2.0 8.5 5.2 2.7 171 chr2R 7328991 intron,intron Dscam1 -,CR45129 + chr2R 7329076 intron,intron Dscam1 -,CR45129 + chr2R 7329162 intron,intron Dscam1 -,CR45129 + chr2R_17_7325001 chr2R_7325001 RAL-109_125b 1349 chr2R 7389524 7389595 chr2R 7389676 7389728 29 150 7.5 6.5 7.0 3.6 204 chr2R 7389524 intron CG11107 + chr2R 7389626 intron CG11107 + chr2R 7389728 intron CG11107 + chr2R_29_7385001 chr2R_7385001 RAL-109_125b 1350 chr2R 7417856 7418154 chr2R 7417992 7418282 43 131 11.5 13.0 12.2 3.3 426 chr2R 7417856 intergenic not near genes chr2R 7418069 intergenic not near genes chr2R 7418282 intergenic not near genes chr2R_43_7415001 chr2R_7415001 RAL-109_125b 1351 chr2R 7418159 7418169 chr2R 7418283 7418293 7 127 9.0 22.0 15.5 0.4 134 chr2R 7418159 intergenic not near genes chr2R 7418226 intergenic not near genes chr2R 7418293 intergenic not near genes chr2R_7_7415001 chr2R_7415001 RAL-109_125b 1352 chr2R 7434858 7434907 chr2R 7439209 7439258 Juan 22 4350 15.0 9.0 12.0 1.7 4400 chr2R 7434858 3` UTR so + chr2R 7437058 intergenic not near genes chr2R 7439258 intergenic not near genes chr2R_22_7435001 chr2R_7435001 RAL-109_125b 1353 chr2R 7459238 7459302 chr2R 7459376 7459380 9 131 5.0 4.0 4.5 1.6 142 chr2R 7459238 intergenic Inos -,CG11141 - chr2R 7459309 intergenic CG11141 -,Inos - chr2R 7459380 intergenic CG11141 - chr2R_9_7455001 chr2R_7455001 RAL-109_125b 1354 chr2R 7608379 7608405 chr2R 7613630 7613658 I-element 6 5252 7.0 9.5 8.2 0.7 5279 chr2R 7608379 intron CG1358 - chr2R 7611018 intron CG1358 - chr2R 7613658 intron CG1358 - chr2R_6_7610001 chr2R_7610001 RAL-109_125b 1355 chr2R 7608406 7608425 chr2R 7613624 7613678 I-element 10 5250 5.5 9.0 7.2 1.2 5272 chr2R 7608406 intron CG1358 - chr2R 7611042 intron CG1358 - chr2R 7613678 intron CG1358 - chr2R_10_7610001 chr2R_7610001 RAL-109_125b 1356 chr2R 7629888 7629918 chr2R 7630011 7630014 5 115 14.0 16.0 15.0 0.3 126 chr2R 7629888 intron CG43340 + chr2R 7629951 intron CG43340 + chr2R 7630014 intron CG43340 + chr2R_5_7625001 chr2R_7625001 RAL-109_125b 1357 chr2R 7629919 7629942 chr2R 7630009 7630068 7 114 11.5 16.0 13.8 0.5 149 chr2R 7629919 intron CG43340 + chr2R 7629994 intron CG43340 + chr2R 7630068 intron CG43340 + chr2R_7_7625001 chr2R_7625001 RAL-109_125b 1358 chr2R 7665990 7666068 chr2R 7666682 7666741 20 689 3.5 8.0 5.8 2.9 751 chr2R 7665990 exon CG2064 + chr2R 7666366 exon CG2064 + chr2R 7666741 exon CG2064 + chr2R_20_7665001 chr2R_7665001 RAL-109_125b 1359 chr2R 7714046 7714057 chr2R 7714172 7714183 5 126 19.0 8.5 13.8 0.3 137 chr2R 7714046 exon CG1942 + chr2R 7714114 exon CG1942 + chr2R 7714183 intergenic CG1942 + chr2R_5_7710001 chr2R_7710001 RAL-109_125b 1360 chr2R 7714058 7714113 chr2R 7714158 7714246 17 129 8.0 7.5 7.8 1.9 188 chr2R 7714058 exon CG1942 + chr2R 7714152 3` UTR CG1942 + chr2R 7714246 intergenic CG1942 + chr2R_17_7710001 chr2R_7710001 RAL-109_125b 1361 chr2R 7815632 7815702 chr2R 7822141 7822201 Burdock 29 6515 6.0 4.5 5.2 4.7 6569 chr2R 7815632 intergenic CG1882 + chr2R 7818916 intergenic not near genes chr2R 7822201 3` UTR cathD - chr2R_29_7815001 chr2R_7815001 RAL-109_125b 1362 chr2R 7862225 7862245 chr2R 7867361 7867367 flea 4 5133 13.5 12.0 12.8 0.3 5142 chr2R 7862225 intron Dgk - chr2R 7864796 intron Dgk - chr2R 7867367 intron Dgk - chr2R_4_7860001 chr2R_7860001 RAL-109_125b 1363 chr2R 7869149 7869156 chr2R 7873985 7873991 Doc 7 4836 24.0 14.0 19.0 0.3 4842 chr2R 7869149 intron Dgk - chr2R 7871570 intron Dgk - chr2R 7873991 intron Dgk - chr2R_7_7870001 chr2R_7870001 RAL-109_125b 1364 chr2R 7869162 7869215 chr2R 7873983 7874018 Doc 16 4828 10.0 14.0 12.0 1.2 4856 chr2R 7869162 intron Dgk - chr2R 7871590 intron Dgk - chr2R 7874018 intron Dgk - chr2R_16_7870001 chr2R_7870001 RAL-109_125b 1365 chr2R 7897138 7897150 chr2R 7897251 7897278 6 123 0.0 15.0 7.5 0.7 140 chr2R 7897138 intron CG30377 + chr2R 7897208 intron CG30377 + chr2R 7897278 intron CG30377 + chr2R_6_7895001 chr2R_7895001 RAL-109_125b 1366 chr2R 7916382 7916428 chr2R 7916517 7916549 16 132 11.0 6.5 8.8 1.6 167 chr2R 7916382 5` UTR CG12159 - chr2R 7916466 5` UTR CG12159 - chr2R 7916549 intergenic CG12159 -,Cul1 + chr2R_16_7915001 chr2R_7915001 RAL-109_125b 1367 chr2R 7916434 7916447 chr2R 7916513 7916582 5 124 7.5 5.5 6.5 0.7 148 chr2R 7916434 5` UTR CG12159 - chr2R 7916508 intergenic CG12159 -,Cul1 + chr2R 7916582 intergenic CG12159 -,Cul1 + chr2R_5_7915001 chr2R_7915001 RAL-109_125b 1368 chr2R 7942885 7942953 chr2R 7943192 7943260 18 307 6.0 6.0 6.0 2.6 375 chr2R 7942885 exon CG14764 - chr2R 7943072 intron CG14764 - chr2R 7943260 intron CG14764 - chr2R_18_7940001 chr2R_7940001 RAL-109_125b 1369 chr2R 7943834 7943910 chr2R 7943975 7944046 41 140 12.5 4.5 8.5 4.3 212 chr2R 7943834 intron,exon CG14764 -,CG34430 + chr2R 7943940 intron,intron CG14764 -,CG34430 + chr2R 7944046 intron,intron CG14764 -,CG34430 + chr2R_41_7940001 chr2R_7940001 RAL-109_125b 1370 chr2R 8015612 8015621 chr2R 8017685 8017693 5 2072 19.5 10.5 15.0 0.3 2081 chr2R 8015612 intergenic mir-4981 + chr2R 8016652 intergenic not near genes chr2R 8017693 intergenic not near genes chr2R_5_8015001 chr2R_8015001 RAL-109_125b 1371 chr2R 8015624 8015670 chr2R 8017677 8017695 16 2053 5.5 8.0 6.8 2.1 2071 chr2R 8015624 intergenic mir-4981 + chr2R 8016660 intergenic not near genes chr2R 8017695 intergenic not near genes chr2R_16_8015001 chr2R_8015001 RAL-109_125b 1372 chr2R 8026763 8026834 chr2R 8026889 8026960 19 126 8.5 4.5 6.5 2.5 197 chr2R 8026763 intergenic CR45267 + chr2R 8026862 intergenic CR45267 + chr2R 8026960 intergenic CR45267 + chr2R_19_8025001 chr2R_8025001 RAL-109_125b 1373 chr2R 8028521 8028595 chr2R 8028652 8028710 23 126 6.0 8.5 7.2 2.8 189 chr2R 8028521 intergenic CR43724 - chr2R 8028616 intergenic CR43724 - chr2R 8028710 intergenic CR43724 - chr2R_23_8025001 chr2R_8025001 RAL-109_125b 1374 chr2R 8049550 8049603 chr2R 8049732 8049785 7 178 2.5 11.0 6.8 0.9 235 chr2R 8049550 intergenic not near genes chr2R 8049668 intergenic not near genes chr2R 8049785 intergenic not near genes chr2R_7_8045001 chr2R_8045001 RAL-109_125b 1375 chr2R 8060452 8060504 chr2R 8060657 8060714 14 203 5.0 7.5 6.2 1.9 262 chr2R 8060452 intron CG12769 - chr2R 8060583 intron CG12769 - chr2R 8060714 intron CG12769 - chr2R_14_8060001 chr2R_8060001 RAL-109_125b 1376 chr2R 8067016 8067088 chr2R 8067150 8067222 32 133 10.0 6.0 8.0 3.6 206 chr2R 8067016 intron CG17977 - chr2R 8067119 intron CG17977 - chr2R 8067222 exon CG17977 - chr2R_32_8065001 chr2R_8065001 RAL-109_125b 1377 chr2R 8078881 8078953 chr2R 8079018 8079091 32 137 5.0 7.5 6.2 4.4 210 chr2R 8078881 3` UTR Vps28 - chr2R 8078986 3` UTR Vps28 - chr2R 8079091 3` UTR Vps28 - chr2R_32_8075001 chr2R_8075001 RAL-109_125b 1378 chr2R 8089205 8089274 chr2R 8089341 8089410 19 135 6.0 7.5 6.8 2.4 205 chr2R 8089205 exon sut2 + chr2R 8089308 intergenic sut2 +,sut3 + chr2R 8089410 intergenic sut3 +,sut2 + chr2R_19_8085001 chr2R_8085001 RAL-109_125b 1379 chr2R 8105905 8105959 chr2R 8106033 8106099 30 137 4.5 8.0 6.2 4.2 194 chr2R 8105905 5` UTR Cul4 - chr2R 8106002 intron Cul4 - chr2R 8106099 5` UTR Cul4 - chr2R_30_8105001 chr2R_8105001 RAL-109_125b 1380 chr2R 8160887 8160912 chr2R 8161027 8161052 8 139 16.0 13.5 14.8 0.5 165 chr2R 8160887 exon CG8708 - chr2R 8160970 intron CG8708 - chr2R 8161052 intron CG8708 - chr2R_8_8160001 chr2R_8160001 RAL-109_125b 1381 chr2R 8160914 8160946 chr2R 8161026 8161049 1360 13 131 7.0 13.5 10.2 1.2 135 chr2R 8160914 exon CG8708 - chr2R 8160982 intron CG8708 - chr2R 8161049 intron CG8708 - chr2R_13_8160001 chr2R_8160001 RAL-109_125b 1382 chr2R 8203714 8203753 chr2R 8203852 8203895 14 140 10.0 5.5 7.8 1.6 181 chr2R 8203714 intron LRP1 + chr2R 8203804 intron LRP1 + chr2R 8203895 intron LRP1 + chr2R_14_8200001 chr2R_8200001 RAL-109_125b 1383 chr2R 8235986 8236028 chr2R 8236117 8236158 17 129 8.0 8.5 8.2 1.8 172 chr2R 8235986 intergenic not near genes chr2R 8236072 intergenic not near genes chr2R 8236158 intergenic not near genes chr2R_17_8235001 chr2R_8235001 RAL-109_125b 1384 chr2R 8249518 8249541 chr2R 8249650 8249673 17 132 14.5 5.0 9.8 1.6 155 chr2R 8249518 5` UTR CG44439 - chr2R 8249596 intergenic CG44439 - chr2R 8249673 intergenic CG44439 - chr2R_17_8245001 chr2R_8245001 RAL-109_125b 1385 chr2R 8249548 8249595 chr2R 8249649 8249727 8 128 5.5 5.0 5.2 1.3 179 chr2R 8249548 5` UTR CG44439 - chr2R 8249638 intergenic CG44439 - chr2R 8249727 intergenic CG44439 - chr2R_8_8245001 chr2R_8245001 RAL-109_125b 1386 chr2R 8328238 8328305 chr2R 8328372 8328413 9 126 5.0 1.5 3.2 2.1 175 chr2R 8328238 intron pdm3 + chr2R 8328326 intron pdm3 + chr2R 8328413 intron pdm3 + chr2R_9_8325001 chr2R_8325001 RAL-109_125b 1387 chr2R 8330821 8330886 chr2R 8331356 8331422 roo 24 535 9.0 12.5 10.8 2.0 601 chr2R 8330821 intron pdm3 + chr2R 8331122 intron pdm3 + chr2R 8331422 intron pdm3 + chr2R_24_8330001 chr2R_8330001 RAL-109_125b 1388 chr2R 8398180 8398199 chr2R 8402996 8403010 Doc 5 4821 14.0 10.0 12.0 0.4 4830 chr2R 8398180 intron CG2121 - chr2R 8400595 intron CG2121 - chr2R 8403010 intron CG2121 - chr2R_5_8400001 chr2R_8400001 RAL-109_125b 1389 chr2R 8398202 8398233 chr2R 8402992 8403064 Doc 15 4818 7.5 9.5 8.5 1.6 4862 chr2R 8398202 intron CG2121 - chr2R 8400633 intron CG2121 - chr2R 8403064 intron CG2121 - chr2R_15_8400001 chr2R_8400001 RAL-109_125b 1390 chr2R 8416275 8416301 chr2R 8417147 8417151 I-element 7 864 11.5 11.0 11.2 0.6 876 chr2R 8416275 intergenic not near genes chr2R 8416713 intergenic CG43296 - chr2R 8417151 intergenic CG43296 - chr2R_7_8415001 chr2R_8415001 RAL-109_125b 1391 chr2R 8478181 8478251 chr2R 8478323 8478346 23 133 7.5 11.5 9.5 2.2 165 chr2R 8478181 intron mtt - chr2R 8478264 intron mtt - chr2R 8478346 intron mtt - chr2R_23_8475001 chr2R_8475001 RAL-109_125b 1392 chr2R 8489938 8489968 chr2R 8490073 8490104 9 136 0.0 9.0 4.5 1.6 166 chr2R 8489938 intron mtt - chr2R 8490021 intron mtt - chr2R 8490104 intron mtt - chr2R_9_8490001 chr2R_8490001 RAL-109_125b 1393 chr2R 8490566 8490588 chr2R 8492341 8492344 Rt1c 9 1771 9.0 14.5 11.8 0.7 1778 chr2R 8490566 intron mtt - chr2R 8491455 intron mtt - chr2R 8492344 intron mtt - chr2R_9_8490001 chr2R_8490001 RAL-109_125b 1394 chr2R 8524912 8524977 chr2R 8525093 8525140 23 179 5.0 8.0 6.5 3.1 228 chr2R 8524912 intron mtt - chr2R 8525026 intron mtt - chr2R 8525140 intron mtt - chr2R_23_8525001 chr2R_8525001 RAL-109_125b 1395 chr2R 8612532 8612609 chr2R 8612659 8612732 26 126 10.0 7.0 8.5 2.7 200 chr2R 8612532 intron CG8642 - chr2R 8612632 intron CG8642 - chr2R 8612732 intron CG8642 - chr2R_26_8610001 chr2R_8610001 RAL-109_125b 1396 chr2R 8658221 8658252 chr2R 8658326 8658353 7 107 4.0 12.0 8.0 0.8 132 chr2R 8658221 intron ptc + chr2R 8658287 intron ptc + chr2R 8658353 intron ptc + chr2R_7_8655001 chr2R_8655001 RAL-109_125b 1397 chr2R 8717519 8717583 chr2R 8717800 8717864 23 281 6.0 5.5 5.8 3.4 345 chr2R 8717519 exon PGRP-SC2 + chr2R 8717692 3` UTR PGRP-SC2 + chr2R 8717864 intergenic CG14767 -,PGRP-SC2 + chr2R_23_8715001 chr2R_8715001 RAL-109_125b 1398 chr2R 8722722 8722786 chr2R 8723013 8723052 pogo 16 285 10.0 10.0 10.0 1.5 330 chr2R 8722722 intron CG14767 - chr2R 8722887 intron CG14767 - chr2R 8723052 intron CG14767 - chr2R_16_8720001 chr2R_8720001 RAL-109_125b 1399 chr2R 8777875 8777945 chr2R 8784129 8784199 diver 19 6254 4.5 7.5 6.0 2.7 6324 chr2R 8777875 intergenic not near genes chr2R 8781037 intergenic not near genes chr2R 8784199 intergenic not near genes chr2R_19_8780001 chr2R_8780001 RAL-109_125b 1400 chr2R 8833388 8833449 chr2R 8833509 8833515 30 126 9.0 5.5 7.2 3.7 127 chr2R 8833388 intron sns + chr2R 8833452 intron sns + chr2R 8833515 intron sns + chr2R_30_8830001 chr2R_8830001 RAL-109_125b 1401 chr2R 8933157 8933186 chr2R 8933294 8933316 19 139 14.5 8.0 11.2 1.6 159 chr2R 8933157 intergenic PAN2 +,CG13749 + chr2R 8933236 intergenic PAN2 +,CG13749 + chr2R 8933316 intergenic CG13749 +,PAN2 + chr2R_19_8930001 chr2R_8930001 RAL-109_125b 1402 chr2R 8933187 8933216 chr2R 8933281 8933358 13 134 9.5 4.0 6.8 1.7 171 chr2R 8933187 intergenic PAN2 +,CG13749 + chr2R 8933272 intergenic CG13749 +,PAN2 + chr2R 8933358 intergenic CG13749 +,PAN2 + chr2R_13_8930001 chr2R_8930001 RAL-109_125b 1403 chr2R 8954357 8954431 chr2R 8954495 8954569 26 137 5.5 7.0 6.2 3.6 212 chr2R 8954357 intron babo + chr2R 8954463 intron babo + chr2R 8954569 intron babo + chr2R_26_8950001 chr2R_8950001 RAL-109_125b 1404 chr2R 9076087 9076168 chr2R 9076213 9076294 20 126 4.5 4.5 4.5 3.6 207 chr2R 9076087 intron ana + chr2R 9076190 intron ana + chr2R 9076294 intron ana + chr2R_20_9075001 chr2R_9075001 RAL-109_125b 1405 chr2R 9078436 9078481 chr2R 9078564 9078609 19 126 5.5 5.5 5.5 2.9 173 chr2R 9078436 intergenic CG8083 + chr2R 9078522 intergenic CG8083 + chr2R 9078609 intergenic CG8083 + chr2R_19_9075001 chr2R_9075001 RAL-109_125b 1406 chr2R 9151257 9151325 chr2R 9157777 9157845 Burdock 15 6516 8.0 7.5 7.8 1.7 6588 chr2R 9151257 exon CG30345 + chr2R 9154551 intergenic not near genes chr2R 9157845 intergenic CG8008 - chr2R_15_9150001 chr2R_9150001 RAL-109_125b 1407 chr2R 9212656 9212679 chr2R 9213192 9213215 roo 9 533 14.5 1.5 8.0 1.0 559 chr2R 9212656 intergenic CR45309 + chr2R 9212936 intergenic CR45309 + chr2R 9213215 5` UTR CR45309 + chr2R_9_9210001 chr2R_9210001 RAL-109_125b 1408 chr2R 9212683 9212714 chr2R 9213183 9213226 roo 6 524 9.0 1.5 5.2 1.0 543 chr2R 9212683 intergenic CR45309 + chr2R 9212954 intergenic CR45309 + chr2R 9213226 5` UTR CR45309 + chr2R_6_9210001 chr2R_9210001 RAL-109_125b 1409 chr2R 9213209 9213224 chr2R 9213334 9213337 5 129 1.5 16.0 8.8 0.5 128 chr2R 9213209 5` UTR CR45309 + chr2R 9213273 5` UTR CR45309 + chr2R 9213337 5` UTR CR45309 + chr2R_5_9210001 chr2R_9210001 RAL-109_125b 1410 chr2R 9216200 9216274 chr2R 9216359 9216426 18 154 0.0 11.0 5.5 2.8 226 chr2R 9216200 intergenic not near genes chr2R 9216313 intergenic not near genes chr2R 9216426 intergenic not near genes chr2R_18_9215001 chr2R_9215001 RAL-109_125b 1411 chr2R 9368091 9368134 chr2R 9368202 9368235 7 119 7.5 0.5 4.0 1.4 144 chr2R 9368091 intron CG13954 - chr2R 9368163 intron CG13954 - chr2R 9368235 intron CG13954 - chr2R_7_9365001 chr2R_9365001 RAL-109_125b 1412 chr2R 9378064 9378134 chr2R 9378196 9378196 30 123 5.5 9.5 7.5 3.5 132 chr2R 9378064 intron CG13954 - chr2R 9378130 intron CG13954 - chr2R 9378196 intron CG13954 - chr2R_30_9375001 chr2R_9375001 RAL-109_125b 1413 chr2R 9407785 9407849 chr2R 9407927 9407992 23 139 10.5 5.5 8.0 2.6 207 chr2R 9407785 intron wun - chr2R 9407888 intron wun - chr2R 9407992 intron wun - chr2R_23_9405001 chr2R_9405001 RAL-109_125b 1414 chr2R 9480050 9480059 chr2R 9490611 9490640 roo 5 10577 16.0 8.0 12.0 0.4 10590 chr2R 9480050 intergenic not near genes chr2R 9485345 intergenic not near genes chr2R 9490640 intergenic not near genes chr2R_5_9485001 chr2R_9485001 RAL-109_125b 1415 chr2R 9510616 9510698 chr2R 9510781 9510843 22 164 5.0 4.5 4.8 3.8 227 chr2R 9510616 exon brp + chr2R 9510730 intron brp + chr2R 9510843 exon brp + chr2R_22_9510001 chr2R_9510001 RAL-109_125b 1416 chr2R 9541577 9541655 chr2R 9541704 9541767 20 123 4.5 7.5 6.0 2.9 190 chr2R 9541577 intergenic brp +,CG1888 - chr2R 9541672 intergenic brp +,CG1888 - chr2R 9541767 intergenic CG1888 -,brp + chr2R_20_9540001 chr2R_9540001 RAL-109_125b 1417 chr2R 9561801 9561839 chr2R 9561933 9561977 10 137 5.5 9.5 7.5 1.2 176 chr2R 9561801 3` UTR,intron CR45281 -,CG1809 + chr2R 9561889 3` UTR,intron CR45281 -,CG1809 + chr2R 9561977 3` UTR,intron CR45281 -,CG1809 + chr2R_10_9560001 chr2R_9560001 RAL-109_125b 1418 chr2R 9653214 9653283 chr2R 9653348 9653417 23 132 4.5 8.0 6.2 3.2 203 chr2R 9653214 intron Mmp2 - chr2R 9653316 intron Mmp2 - chr2R 9653417 intron Mmp2 - chr2R_23_9650001 chr2R_9650001 RAL-109_125b 1419 chr2R 9726572 9726626 chr2R 9734173 9734227 17.6 14 7601 9.5 9.0 9.2 1.4 7655 chr2R 9726572 intron sqa - chr2R 9730400 intron sqa - chr2R 9734227 intron sqa - chr2R_14_9730001 chr2R_9730001 RAL-109_125b 1420 chr2R 9765105 9765178 chr2R 9765226 9765288 22 119 7.5 7.0 7.2 2.7 183 chr2R 9765105 exon trpl + chr2R 9765196 exon trpl + chr2R 9765288 exon trpl + chr2R_22_9765001 chr2R_9765001 RAL-109_125b 1421 chr2R 9790040 9790103 chr2R 9790167 9790220 16 120 7.5 7.5 7.5 1.9 180 chr2R 9790040 intron,5` UTR CG1688 -,CR44208 + chr2R 9790130 intron,5` UTR CG1688 -,CR44208 + chr2R 9790220 intron,5` UTR CG1688 -,CR44208 + chr2R_16_9790001 chr2R_9790001 RAL-109_125b 1422 chr2R 9871000 9871031 chr2R 9871536 9871567 roo 12 535 0.5 9.5 5.0 2.0 567 chr2R 9871000 intron cbx - chr2R 9871284 intron cbx - chr2R 9871567 intron,5` UTR cbx -,CG18446 + chr2R_12_9870001 chr2R_9870001 RAL-109_125b 1423 chr2R 9871059 9871068 chr2R 9871563 9871604 roo 7 529 0.5 15.0 7.8 0.8 545 chr2R 9871059 intron cbx - chr2R 9871332 intron cbx - chr2R 9871604 intron,5` UTR cbx -,CG18446 + chr2R_7_9870001 chr2R_9870001 RAL-109_125b 1424 chr2R 9934984 9934992 chr2R 9935116 9935124 5 132 26.5 11.5 19.0 0.2 140 chr2R 9934984 intron Mef2 - chr2R 9935054 intron Mef2 - chr2R 9935124 intron Mef2 - chr2R_5_9935001 chr2R_9935001 RAL-109_125b 1425 chr2R 9934997 9935049 chr2R 9935115 9935181 22 130 10.0 11.0 10.5 1.9 184 chr2R 9934997 intron Mef2 - chr2R 9935089 intron Mef2 - chr2R 9935181 intron Mef2 - chr2R_22_9935001 chr2R_9935001 RAL-109_125b 1426 chr2R 9945394 9945422 chr2R 9945640 9945668 BS 8 241 15.5 10.0 12.8 0.6 274 chr2R 9945394 intron Mef2 - chr2R 9945531 intron Mef2 - chr2R 9945668 intron Mef2 - chr2R_8_9945001 chr2R_9945001 RAL-109_125b 1427 chr2R 9945423 9945464 chr2R 9945638 9945679 BS 18 237 8.5 10.0 9.2 1.8 256 chr2R 9945423 intron Mef2 - chr2R 9945551 intron Mef2 - chr2R 9945679 intron Mef2 - chr2R_18_9945001 chr2R_9945001 RAL-109_125b 1428 chr2R 9949871 9949900 chr2R 9949968 9950024 11 120 12.0 0.5 6.2 1.5 153 chr2R 9949871 intron Mef2 - chr2R 9949948 intron Mef2 - chr2R 9950024 intron Mef2 - chr2R_11_9945001 chr2R_9945001 RAL-109_125b 1429 chr2R 9999142 9999208 chr2R 9999310 9999376 30 167 7.0 7.5 7.2 3.7 234 chr2R 9999142 intron Pka-R2 - chr2R 9999259 intron Pka-R2 - chr2R 9999376 intron Pka-R2 - chr2R_30_9995001 chr2R_9995001 RAL-109_125b 1430 chr2R 10005803 10005877 chr2R 10007018 10007075 1360 28 1205 11.0 6.5 8.8 2.9 1272 chr2R 10005803 intron Pka-R2 - chr2R 10006439 intron Pka-R2 - chr2R 10007075 intron Pka-R2 - chr2R_28_10005001 chr2R_10005001 RAL-109_125b 1431 chr2R 10044075 10044140 chr2R 10044379 10044439 23 301 13.0 8.5 10.8 1.9 364 chr2R 10044075 intron,5` UTR oys -,CR44295 + chr2R 10044257 intron,5` UTR oys -,CR44295 + chr2R 10044439 intron,5` UTR oys -,CR44295 + chr2R_23_10040001 chr2R_10040001 RAL-109_125b 1432 chr2R 10047795 10047825 chr2R 10047920 10047958 8 132 3.0 15.5 9.2 0.8 163 chr2R 10047795 intron oys - chr2R 10047876 intron oys - chr2R 10047958 intron oys - chr2R_8_10045001 chr2R_10045001 RAL-109_125b 1433 chr2R 10059232 10059261 chr2R 10059671 10059694 8 434 12.0 8.0 10.0 0.7 462 chr2R 10059232 intron magu + chr2R 10059463 intron magu + chr2R 10059694 intron magu + chr2R_8_10055001 chr2R_10055001 RAL-109_125b 1434 chr2R 10059264 10059291 chr2R 10059663 10059716 10 421 8.0 7.0 7.5 1.2 452 chr2R 10059264 intron magu + chr2R 10059490 intron magu + chr2R 10059716 intron magu + chr2R_10_10055001 chr2R_10055001 RAL-109_125b 1435 chr2R 10086870 10086934 chr2R 10087017 10087080 27 144 10.5 6.5 8.5 2.8 210 chr2R 10086870 intron,exon CG2269 +,sut4 - chr2R 10086975 intron,5` UTR CG2269 +,sut4 - chr2R 10087080 intron,5` UTR CG2269 +,sut4 - chr2R_27_10085001 chr2R_10085001 RAL-109_125b 1436 chr2R 10132140 10132213 chr2R 10132270 10132343 30 128 3.5 10.0 6.8 3.8 203 chr2R 10132140 exon gem + chr2R 10132242 intron gem + chr2R 10132343 exon gem + chr2R_30_10130001 chr2R_10130001 RAL-109_125b 1437 chr2R 10171074 10171145 chr2R 10171208 10171216 22 131 1.5 9.0 5.2 3.5 142 chr2R 10171074 intron KCNQ - chr2R 10171145 intron KCNQ - chr2R 10171216 intron KCNQ - chr2R_22_10170001 chr2R_10170001 RAL-109_125b 1438 chr2R 10176835 10176904 chr2R 10186055 10186124 roo 26 9219 6.5 6.5 6.5 3.5 9289 chr2R 10176835 intron KCNQ - chr2R 10181480 intron KCNQ - chr2R 10186124 intron KCNQ - chr2R_26_10180001 chr2R_10180001 RAL-109_125b 1439 chr2R 10189163 10189227 chr2R 10189291 10189350 19 127 8.0 9.0 8.5 2.0 187 chr2R 10189163 intron KCNQ - chr2R 10189256 intron KCNQ - chr2R 10189350 intron KCNQ - chr2R_19_10185001 chr2R_10185001 RAL-109_125b 1440 chr2R 10193175 10193230 chr2R 10193309 10193364 14 134 5.5 5.5 5.5 2.2 189 chr2R 10193175 intergenic not near genes chr2R 10193270 intergenic not near genes chr2R 10193364 intergenic not near genes chr2R_14_10190001 chr2R_10190001 RAL-109_125b 1441 chr2R 10214519 10214529 chr2R 10214685 10214696 4 167 17.5 20.0 18.8 0.2 177 chr2R 10214519 intron,intron CG12912 -,Hr46 - chr2R 10214608 intron,intron CG12912 -,Hr46 - chr2R 10214696 intron,intron CG12912 -,Hr46 - chr2R_4_10210001 chr2R_10210001 RAL-109_125b 1442 chr2R 10234934 10234939 chr2R 10235073 10235078 4 139 17.0 0.0 8.5 0.4 144 chr2R 10234934 intron Hr46 - chr2R 10235006 intron Hr46 - chr2R 10235078 intron Hr46 - chr2R_4_10235001 chr2R_10235001 RAL-109_125b 1443 chr2R 10266470 10266510 chr2R 10266595 10266611 8 125 12.0 6.5 9.2 0.8 141 chr2R 10266470 intron CG12910 + chr2R 10266540 intron CG12910 + chr2R 10266611 intron CG12910 + chr2R_8_10265001 chr2R_10265001 RAL-109_125b 1444 chr2R 10266511 10266526 chr2R 10266586 10266636 5 105 9.0 6.0 7.5 0.6 125 chr2R 10266511 intron CG12910 + chr2R 10266574 intron CG12910 + chr2R 10266636 intron CG12910 + chr2R_5_10265001 chr2R_10265001 RAL-109_125b 1445 chr2R 10274771 10274809 chr2R 10274897 10274935 17 126 14.0 3.5 8.8 1.7 164 chr2R 10274771 intron CAP + chr2R 10274853 intron CAP + chr2R 10274935 intron CAP + chr2R_17_10270001 chr2R_10270001 RAL-109_125b 1446 chr2R 10313288 10313302 chr2R 10313420 10313440 8 137 0.5 1.0 0.8 4.4 152 chr2R 10313288 intergenic not near genes chr2R 10313364 intergenic not near genes chr2R 10313440 intergenic Ndg + chr2R_8_10310001 chr2R_10310001 RAL-109_125b 1447 chr2R 10313304 10313335 chr2R 10313411 10313473 17 136 0.5 1.0 0.8 9.4 169 chr2R 10313304 intergenic not near genes chr2R 10313388 intergenic not near genes chr2R 10313473 intergenic Ndg + chr2R_17_10310001 chr2R_10310001 RAL-109_125b 1448 chr2R 10318460 10318534 chr2R 10318601 10318670 24 136 5.5 10.0 7.8 2.7 210 chr2R 10318460 exon Ndg + chr2R 10318565 intron Ndg + chr2R 10318670 intron Ndg + chr2R_24_10315001 chr2R_10315001 RAL-109_125b 1449 chr2R 10347997 10348076 chr2R 10348196 10348275 23 199 6.5 5.5 6.0 3.3 278 chr2R 10347997 intron CG42732 - chr2R 10348136 intron CG42732 - chr2R 10348275 intron CG42732 - chr2R_23_10345001 chr2R_10345001 RAL-109_125b 1450 chr2R 10352626 10352691 chr2R 10352753 10352818 21 125 12.0 12.5 12.2 1.6 192 chr2R 10352626 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352722 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352818 intron,exon,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R_21_10350001 chr2R_10350001 RAL-109_125b 1451 chr2R 10363841 10363843 chr2R 10363970 10363972 4 129 17.5 15.0 16.2 0.2 131 chr2R 10363841 intron CG42732 - chr2R 10363906 intron CG42732 - chr2R 10363972 intron CG42732 - chr2R_4_10360001 chr2R_10360001 RAL-109_125b 1452 chr2R 10363850 10363889 chr2R 10363943 10364018 20 124 8.0 8.0 8.0 2.2 168 chr2R 10363850 intron CG42732 - chr2R 10363934 intron CG42732 - chr2R 10364018 intron CG42732 - chr2R_20_10360001 chr2R_10360001 RAL-109_125b 1453 chr2R 10387977 10388001 chr2R 10388124 10388148 8 146 0.0 13.5 6.8 1.0 171 chr2R 10387977 intron CG42732 - chr2R 10388062 intron CG42732 - chr2R 10388148 intron CG42732 - chr2R_8_10385001 chr2R_10385001 RAL-109_125b 1454 chr2R 10409017 10409081 chr2R 10409144 10409207 27 126 0.0 9.5 4.8 4.7 190 chr2R 10409017 intron CG42732 - chr2R 10409112 intron CG42732 - chr2R 10409207 intron,exon CG42732 -,CG33477 - chr2R_27_10405001 chr2R_10405001 RAL-109_125b 1455 chr2R 10411761 10411832 chr2R 10411893 10411964 31 131 6.0 9.0 7.5 3.6 203 chr2R 10411761 intron CG42732 - chr2R 10411862 intron CG42732 - chr2R 10411964 intron CG42732 - chr2R_31_10410001 chr2R_10410001 RAL-109_125b 1456 chr2R 10428972 10429052 chr2R 10429099 10429152 27 121 5.0 6.0 5.5 4.2 180 chr2R 10428972 intergenic not near genes chr2R 10429062 intergenic not near genes chr2R 10429152 intergenic not near genes chr2R_27_10425001 chr2R_10425001 RAL-109_125b 1457 chr2R 10454050 10454069 chr2R 10454177 10454196 10 126 18.0 8.0 13.0 0.7 146 chr2R 10454050 intron,intron Galphao +,Cyp49a1 - chr2R 10454123 intron,intron Galphao +,Cyp49a1 - chr2R 10454196 intron,intron Galphao +,Cyp49a1 - chr2R_10_10450001 chr2R_10450001 RAL-109_125b 1458 chr2R 10454070 10454125 chr2R 10454175 10454252 22 122 9.5 7.0 8.2 2.4 182 chr2R 10454070 intron,intron Galphao +,Cyp49a1 - chr2R 10454161 intron,intron Galphao +,Cyp49a1 - chr2R 10454252 intron,intron Galphao +,Cyp49a1 - chr2R_22_10450001 chr2R_10450001 RAL-109_125b 1459 chr2R 10456151 10456209 chr2R 10456276 10456306 8 112 2.5 0.0 1.2 3.6 155 chr2R 10456151 intron,5` UTR Galphao +,Cyp49a1 - chr2R 10456228 intron,intron Galphao +,Cyp49a1 - chr2R 10456306 intron,intron Galphao +,Cyp49a1 - chr2R_8_10455001 chr2R_10455001 RAL-109_125b 1460 chr2R 10468987 10469051 chr2R 10469154 10469227 29 174 5.0 9.5 7.2 3.5 240 chr2R 10468987 intron CG11777 + chr2R 10469107 intron CG11777 + chr2R 10469227 exon CG11777 + chr2R_29_10465001 chr2R_10465001 RAL-109_125b 1461 chr2R 10478746 10478790 chr2R 10478874 10478917 12 127 16.5 5.0 10.8 1.0 171 chr2R 10478746 5` UTR CR45134 + chr2R 10478832 intergenic CR45134 +,trsn -,whd - chr2R 10478917 intergenic trsn -,CR45134 +,whd - chr2R_12_10475001 chr2R_10475001 RAL-109_125b 1462 chr2R 10509545 10509553 chr2R 10509682 10509689 4 137 15.5 0.0 7.8 0.5 144 chr2R 10509545 intron lola - chr2R 10509617 intron lola - chr2R 10509689 intron lola - chr2R_4_10505001 chr2R_10505001 RAL-109_125b 1463 chr2R 10542052 10542107 chr2R 10542214 10542269 32 161 8.0 5.5 6.8 4.1 217 chr2R 10542052 intron lola - chr2R 10542160 intron lola - chr2R 10542269 intron lola - chr2R_32_10540001 chr2R_10540001 RAL-109_125b 1464 chr2R 10554566 10554629 chr2R 10554700 10554764 28 133 9.0 10.0 9.5 2.7 198 chr2R 10554566 intergenic not near genes chr2R 10554665 intergenic not near genes chr2R 10554764 intergenic not near genes chr2R_28_10550001 chr2R_10550001 RAL-109_125b 1465 chr2R 10563904 10563925 chr2R 10564144 10564171 12 245 0.0 13.0 6.5 1.6 267 chr2R 10563904 intron psq + chr2R 10564038 intron psq + chr2R 10564171 intron psq + chr2R_12_10560001 chr2R_10560001 RAL-109_125b 1466 chr2R 10577134 10577145 chr2R 10577256 10577276 6 130 3.0 9.5 6.2 0.8 142 chr2R 10577134 intron psq + chr2R 10577205 intron psq + chr2R 10577276 intron psq + chr2R_6_10575001 chr2R_10575001 RAL-109_125b 1467 chr2R 10577146 10577185 chr2R 10577248 10577316 14 120 2.5 8.0 5.2 2.3 170 chr2R 10577146 intron psq + chr2R 10577231 intron psq + chr2R 10577316 intron psq + chr2R_14_10575001 chr2R_10575001 RAL-109_125b 1468 chr2R 10585575 10585582 chr2R 10594190 10594198 Tirant 4 8624 8.5 20.5 14.5 0.3 8623 chr2R 10585575 intron psq + chr2R 10589886 intron psq + chr2R 10594198 intron psq + chr2R_4_10585001 chr2R_10585001 RAL-109_125b 1469 chr2R 10622311 10622362 chr2R 10637126 10637144 mdg1 7 14810 5.0 5.5 5.2 1.1 14833 chr2R 10622311 intron CG11883 + chr2R 10629728 intron CG11883 + chr2R 10637144 intron CG11883 + chr2R_7_10625001 chr2R_10625001 RAL-109_125b 1470 chr2R 10644009 10644079 chr2R 10644137 10644164 38 126 7.0 0.5 3.8 7.9 155 chr2R 10644009 intron Git - chr2R 10644086 intron Git - chr2R 10644164 intron Git - chr2R_38_10640001 chr2R_10640001 RAL-109_125b 1471 chr2R 10673036 10673103 chr2R 10673174 10673219 12 133 6.5 8.0 7.2 1.5 183 chr2R 10673036 intergenic stan + chr2R 10673128 intergenic stan + chr2R 10673219 intergenic stan + chr2R_12_10670001 chr2R_10670001 RAL-109_125b 1472 chr2R 10777574 10777649 chr2R 10777707 10777783 7 133 6.0 5.5 5.8 1.0 209 chr2R 10777574 intron CG33144 - chr2R 10777678 intron CG33144 - chr2R 10777783 intron CG33144 - chr2R_7_10775001 chr2R_10775001 RAL-109_125b 1473 chr2R 10790099 10790135 chr2R 10790237 10790273 16 137 17.0 5.0 11.0 1.3 174 chr2R 10790099 intron CG33144 - chr2R 10790186 intron CG33144 - chr2R 10790273 intron CG33144 - chr2R_16_10790001 chr2R_10790001 RAL-109_125b 1474 chr2R 10790144 10790172 chr2R 10790251 10790263 15 128 7.5 9.5 8.5 1.6 119 chr2R 10790144 intron CG33144 - chr2R 10790204 intron CG33144 - chr2R 10790263 intron CG33144 - chr2R_15_10790001 chr2R_10790001 RAL-109_125b 1475 chr2R 10848272 10848319 chr2R 10848425 10848437 12 146 9.0 4.0 6.5 1.6 165 chr2R 10848272 intron CG30015 - chr2R 10848354 intron CG30015 - chr2R 10848437 intron CG30015 - chr2R_12_10845001 chr2R_10845001 RAL-109_125b 1476 chr2R 10862519 10862599 chr2R 10862680 10862700 23 158 7.0 0.0 3.5 5.1 181 chr2R 10862519 intron CG30015 - chr2R 10862610 intron CG30015 - chr2R 10862700 intron CG30015 - chr2R_23_10860001 chr2R_10860001 RAL-109_125b 1477 chr2R 10948028 10948056 chr2R 10955596 10955628 17.6 11 7587 1.0 10.5 5.8 1.6 7600 chr2R 10948028 intergenic not near genes chr2R 10951828 intergenic not near genes chr2R 10955628 intergenic not near genes chr2R_11_10950001 chr2R_10950001 RAL-109_125b 1478 chr2R 10959040 10959106 chr2R 10959169 10959169 21 126 0.0 6.5 3.2 5.0 129 chr2R 10959040 intergenic not near genes chr2R 10959104 intergenic not near genes chr2R 10959169 intergenic not near genes chr2R_21_10955001 chr2R_10955001 RAL-109_125b 1479 chr2R 10960838 10960892 chr2R 10960971 10961045 15 143 3.5 4.5 4.0 3.0 207 chr2R 10960838 intergenic not near genes chr2R 10960942 intergenic not near genes chr2R 10961045 intergenic not near genes chr2R_15_10960001 chr2R_10960001 RAL-109_125b 1480 chr2R 10979606 10979647 chr2R 10980128 10980148 297 5 513 13.5 6.0 9.8 0.5 542 chr2R 10979606 intergenic not near genes chr2R 10979877 intergenic not near genes chr2R 10980148 intergenic not near genes chr2R_5_10975001 chr2R_10975001 RAL-109_125b 1481 chr2R 10979649 10979681 chr2R 10980126 10980171 297 10 505 9.0 5.5 7.2 1.2 522 chr2R 10979649 intergenic not near genes chr2R 10979910 intergenic not near genes chr2R 10980171 intergenic not near genes chr2R_10_10975001 chr2R_10975001 RAL-109_125b 1482 chr2R 11009775 11009840 chr2R 11018999 11019047 roo 21 9219 8.5 9.5 9.0 2.1 9272 chr2R 11009775 intron luna - chr2R 11014411 intron luna - chr2R 11019047 intron luna - chr2R_21_11010001 chr2R_11010001 RAL-109_125b 1483 chr2R 11019844 11019900 chr2R 11024960 11025016 jockey 17 5112 6.5 8.5 7.5 2.0 5172 chr2R 11019844 intron luna - chr2R 11022430 intron luna - chr2R 11025016 intron luna - chr2R_17_11020001 chr2R_11020001 RAL-109_125b 1484 chr2R 11102821 11102829 chr2R 11102953 11102961 5 132 19.5 0.0 9.8 0.5 140 chr2R 11102821 intron luna - chr2R 11102891 intron luna - chr2R 11102961 intron luna - chr2R_5_11100001 chr2R_11100001 RAL-109_125b 1485 chr2R 11102830 11102897 chr2R 11102950 11103029 13 128 5.0 0.0 2.5 3.7 199 chr2R 11102830 intron luna - chr2R 11102930 intron luna - chr2R 11103029 intron luna - chr2R_13_11100001 chr2R_11100001 RAL-109_125b 1486 chr2R 11115231 11115259 chr2R 11115357 11115386 8 124 15.5 12.5 14.0 0.5 155 chr2R 11115231 intron luna - chr2R 11115308 intron luna - chr2R 11115386 intron luna - chr2R_8_11115001 chr2R_11115001 RAL-109_125b 1487 chr2R 11115263 11115277 chr2R 11115355 11115404 9 102 15.0 13.5 14.2 0.6 141 chr2R 11115263 intron luna - chr2R 11115334 intron luna - chr2R 11115404 intron luna - chr2R_9_11115001 chr2R_11115001 RAL-109_125b 1488 chr2R 11134088 11134132 chr2R 11134379 11134423 pogo 12 291 9.5 8.5 9.0 1.2 335 chr2R 11134088 intergenic not near genes chr2R 11134256 intergenic not near genes chr2R 11134423 intergenic not near genes chr2R_12_11130001 chr2R_11130001 RAL-109_125b 1489 chr2R 11161580 11161650 chr2R 11161932 11162002 26 350 2.5 2.0 2.2 8.1 422 chr2R 11161580 intron,intron CG13229 -,shn + chr2R 11161791 intron,intron CG13229 -,shn + chr2R 11162002 intron,intron CG13229 -,shn + chr2R_26_11160001 chr2R_11160001 RAL-109_125b 1490 chr2R 11207782 11207834 chr2R 11208025 11208077 BS 20 239 18.5 14.5 16.5 1.1 295 chr2R 11207782 intron shn + chr2R 11207930 intron shn + chr2R 11208077 intron shn + chr2R_20_11205001 chr2R_11205001 RAL-109_125b 1491 chr2R 11249122 11249196 chr2R 11249298 11249365 19 175 0.0 0.0 0.0 19.0 243 chr2R 11249122 intergenic CG43112 + chr2R 11249244 intergenic CG43112 + chr2R 11249365 intergenic CG43112 + chr2R_19_11245001 chr2R_11245001 RAL-109_125b 1492 chr2R 11265682 11265692 chr2R 11265814 11265824 5 131 19.5 0.0 9.8 0.5 142 chr2R 11265682 exon Cpr47Ee + chr2R 11265753 exon Cpr47Ee + chr2R 11265824 intron Cpr47Ee + chr2R_5_11265001 chr2R_11265001 RAL-109_125b 1493 chr2R 11277574 11277652 chr2R 11278830 11278901 39 1249 9.5 4.0 6.8 5.0 1327 chr2R 11277574 intergenic Cpr47Eg - chr2R 11278238 exon Cpr47Eg - chr2R 11278901 3` UTR CG9067 - chr2R_39_11275001 chr2R_11275001 RAL-109_125b 1494 chr2R 11297605 11297626 chr2R 11301979 11302000 flea 10 4374 9.0 1.0 5.0 1.7 4395 chr2R 11297605 intergenic CG42336 - chr2R 11299802 intergenic not near genes chr2R 11302000 5` UTR CG7741 + chr2R_10_11295001 chr2R_11295001 RAL-109_125b 1495 chr2R 11344096 11344181 chr2R 11344240 11344318 17 142 0.0 15.5 7.8 1.9 222 chr2R 11344096 intergenic alphaTry - chr2R 11344207 intergenic alphaTry - chr2R 11344318 3` UTR alphaTry - chr2R_17_11340001 chr2R_11340001 RAL-109_125b 1496 chr2R 11415482 11415544 chr2R 11418671 11418711 opus 21 3193 8.5 12.0 10.2 1.9 3229 chr2R 11415482 intron Drip - chr2R 11417096 intron Drip - chr2R 11418711 intron Drip - chr2R_21_11415001 chr2R_11415001 RAL-109_125b 1497 chr2R 11419823 11419839 chr2R 11419996 11420019 4 178 11.0 8.0 9.5 0.4 196 chr2R 11419823 intron Drip - chr2R 11419921 intron Drip - chr2R 11420019 intron Drip - chr2R_4_11415001 chr2R_11415001 RAL-109_125b 1498 chr2R 11419840 11419885 chr2R 11419994 11420065 14 171 5.5 8.0 6.8 1.8 225 chr2R 11419840 intron Drip - chr2R 11419952 intron Drip - chr2R 11420065 intron Drip - chr2R_14_11415001 chr2R_11415001 RAL-109_125b 1499 chr2R 11472611 11472676 chr2R 11473851 11473923 pogo 23 1244 12.0 9.5 10.8 1.9 1312 chr2R 11472611 intergenic not near genes chr2R 11473267 intergenic not near genes chr2R 11473923 intergenic not near genes chr2R_23_11470001 chr2R_11470001 RAL-109_125b 1500 chr2R 11480754 11480835 chr2R 11480894 11480968 13 134 2.0 3.5 2.8 3.4 214 chr2R 11480754 intron inv + chr2R 11480861 intron inv + chr2R 11480968 intron inv + chr2R_13_11480001 chr2R_11480001 RAL-109_125b 1501 chr2R 11494261 11494337 chr2R 11494394 11494470 15 132 9.0 5.5 7.2 1.8 209 chr2R 11494261 intron inv + chr2R 11494366 intron inv + chr2R 11494470 intron inv + chr2R_15_11490001 chr2R_11490001 RAL-109_125b 1502 chr2R 11498846 11498853 chr2R 11499024 11499031 4 178 20.0 6.5 13.2 0.3 185 chr2R 11498846 intron inv + chr2R 11498938 intron inv + chr2R 11499031 intron inv + chr2R_4_11495001 chr2R_11495001 RAL-109_125b 1503 chr2R 11498859 11498862 chr2R 11499015 11499040 5 174 19.0 6.5 12.8 0.4 181 chr2R 11498859 intron inv + chr2R 11498950 intron inv + chr2R 11499040 intron inv + chr2R_5_11495001 chr2R_11495001 RAL-109_125b 1504 chr2R 11555349 11555411 chr2R 11555734 11555796 13 385 8.5 6.0 7.2 1.6 447 chr2R 11555349 intergenic not near genes chr2R 11555572 intergenic not near genes chr2R 11555796 intergenic not near genes chr2R_13_11555001 chr2R_11555001 RAL-109_125b 1505 chr2R 11636361 11636383 chr2R 11636489 11636496 6 126 17.0 6.5 11.8 0.5 135 chr2R 11636361 intron CG9005 - chr2R 11636428 intron CG9005 - chr2R 11636496 intron CG9005 - chr2R_6_11635001 chr2R_11635001 RAL-109_125b 1506 chr2R 11636385 11636442 chr2R 11636488 11636560 21 111 9.0 6.5 7.8 2.4 175 chr2R 11636385 intron CG9005 - chr2R 11636472 intron CG9005 - chr2R 11636560 intron CG9005 - chr2R_21_11635001 chr2R_11635001 RAL-109_125b 1507 chr2R 11672809 11672844 chr2R 11672946 11672981 11 136 8.5 11.5 10.0 1.0 172 chr2R 11672809 intron,exon Roc2 -,Tret1-1 + chr2R 11672895 intron,intron Roc2 -,Tret1-1 + chr2R 11672981 intron,intron Roc2 -,Tret1-1 + chr2R_11_11670001 chr2R_11670001 RAL-109_125b 1508 chr2R 11677824 11677897 chr2R 11677947 11678023 28 126 6.0 2.5 4.2 5.4 199 chr2R 11677824 intron,exon Roc2 -,Tret1-2 + chr2R 11677924 intron,3` UTR Roc2 -,Tret1-2 + chr2R 11678023 intron Roc2 - chr2R_28_11675001 chr2R_11675001 RAL-109_125b 1509 chr2R 11724114 11724178 chr2R 11724241 11724311 16 132 5.0 8.0 6.5 2.1 197 chr2R 11724114 intron pyr + chr2R 11724212 intron pyr + chr2R 11724311 exon pyr + chr2R_16_11720001 chr2R_11720001 RAL-109_125b 1510 chr2R 11728233 11728288 chr2R 11728351 11728383 7 115 10.5 10.5 10.5 0.6 150 chr2R 11728233 intergenic not near genes chr2R 11728308 intergenic not near genes chr2R 11728383 intergenic not near genes chr2R_7_11725001 chr2R_11725001 RAL-109_125b 1511 chr2R 11826838 11826917 chr2R 11827000 11827079 14 162 4.5 4.5 4.5 2.5 241 chr2R 11826838 3` UTR CG13192 + chr2R 11826958 3` UTR CG13192 + chr2R 11827079 3` UTR CG13192 + chr2R_14_11825001 chr2R_11825001 RAL-109_125b 1512 chr2R 11839507 11839548 chr2R 11839634 11839664 10 122 11.0 12.0 11.5 0.8 157 chr2R 11839507 5` UTR Sobp - chr2R 11839586 5` UTR Sobp - chr2R 11839664 5` UTR Sobp - chr2R_10_11835001 chr2R_11835001 RAL-109_125b 1513 chr2R 11863835 11863843 chr2R 11863972 11863980 4 137 11.0 8.5 9.8 0.4 145 chr2R 11863835 intergenic CG42531 + chr2R 11863908 intergenic CG42531 + chr2R 11863980 intergenic CG42531 + chr2R_4_11860001 chr2R_11860001 RAL-109_125b 1514 chr2R 11863844 11863887 chr2R 11863971 11864024 14 136 6.5 8.5 7.5 1.6 180 chr2R 11863844 intergenic CG42531 + chr2R 11863934 intergenic CG42531 + chr2R 11864024 intergenic CG42531 + chr2R_14_11860001 chr2R_11860001 RAL-109_125b 1515 chr2R 11932528 11932551 chr2R 11932685 11932718 10 162 9.0 7.0 8.0 1.1 190 chr2R 11932528 intergenic not near genes chr2R 11932623 intergenic not near genes chr2R 11932718 intergenic not near genes chr2R_10_11930001 chr2R_11930001 RAL-109_125b 1516 chr2R 11932555 11932583 chr2R 11932684 11932684 9 152 5.5 6.5 6.0 1.3 129 chr2R 11932555 intergenic not near genes chr2R 11932620 intergenic not near genes chr2R 11932684 intergenic not near genes chr2R_9_11930001 chr2R_11930001 RAL-109_125b 1517 chr2R 12044332 12044381 chr2R 12044467 12044516 18 135 4.5 10.0 7.2 2.2 184 chr2R 12044332 intergenic Drep-1 + chr2R 12044424 intergenic Drep-1 + chr2R 12044516 intergenic Drep-1 + chr2R_18_12040001 chr2R_12040001 RAL-109_125b 1518 chr2R 8518785 8518787 chr2R 12066129 12066177 11 3547351 10.5 30.5 20.5 0.5 3547392 chr2R 8518785 intron mtt - chr2R 10292481 intron CAP + chr2R 12066177 intron CG8888 - chr2R_11_10290001 chr2R_10290001 RAL-109_125b 1519 chr2R 12093909 12093918 chr2R 12094072 12094081 6 163 13.0 4.0 8.5 0.6 172 chr2R 12093909 intron jeb - chr2R 12093995 intron jeb - chr2R 12094081 intron jeb - chr2R_6_12090001 chr2R_12090001 RAL-109_125b 1520 chr2R 12093920 12093978 chr2R 12094068 12094140 15 162 3.0 2.5 2.8 3.9 220 chr2R 12093920 intron jeb - chr2R 12094030 intron jeb - chr2R 12094140 intron jeb - chr2R_15_12090001 chr2R_12090001 RAL-109_125b 1521 chr2R 12108060 12108070 chr2R 12108209 12108225 5 154 11.0 0.0 5.5 0.8 165 chr2R 12108060 intron jeb - chr2R 12108142 intron jeb - chr2R 12108225 intron jeb - chr2R_5_12105001 chr2R_12105001 RAL-109_125b 1522 chr2R 12146424 12146474 chr2R 12147596 12147638 12 1164 37.0 45.5 41.2 0.3 1214 chr2R 12146424 intron,3` UTR Hen1 +,CG8878 - chr2R 12147031 intron,exon Hen1 +,CG8878 - chr2R 12147638 intron,exon Hen1 +,CG8878 - chr2R_12_12145001 chr2R_12145001 RAL-109_125b 1523 chr2R 12146475 12146500 chr2R 12147593 12147650 11 1149 34.5 44.0 39.2 0.3 1175 chr2R 12146475 intron,3` UTR Hen1 +,CG8878 - chr2R 12147062 intron,exon Hen1 +,CG8878 - chr2R 12147650 intron,exon Hen1 +,CG8878 - chr2R_11_12145001 chr2R_12145001 RAL-109_125b 1524 chr2R 12145930 12145936 chr2R 12148573 12148579 5 2643 51.0 65.0 58.0 0.1 2649 chr2R 12145930 exon Hen1 + chr2R 12147254 intron,intron Hen1 +,CG8878 - chr2R 12148579 intron,exon Hen1 +,CG8878 - chr2R_5_12145001 chr2R_12145001 RAL-109_125b 1525 chr2R 12145922 12145986 chr2R 12148580 12148633 25 2649 56.5 63.0 59.8 0.4 2711 chr2R 12145922 exon Hen1 + chr2R 12147278 intron,intron Hen1 +,CG8878 - chr2R 12148633 intron,exon Hen1 +,CG8878 - chr2R_25_12145001 chr2R_12145001 RAL-109_125b 1526 chr2R 12178878 12178939 chr2R 12179002 12179068 13 126 6.5 5.5 6.0 1.9 190 chr2R 12178878 intergenic CR45264 +,EndoG - chr2R 12178973 intergenic CR45264 +,EndoG - chr2R 12179068 5` UTR CR45264 + chr2R_13_12175001 chr2R_12175001 RAL-109_125b 1527 chr2R 12185956 12186036 chr2R 12186101 12186140 76 141 14.5 17.5 16.0 4.5 184 chr2R 12185956 intron Cyp6g1 + chr2R 12186048 intron Cyp6g1 + chr2R 12186140 intron Cyp6g1 + chr2R_76_12185001 chr2R_12185001 RAL-109_125b 1528 chr2R 12185225 12185269 chr2R 12188100 12188144 36 2878 49.0 309.5 179.2 0.2 2919 chr2R 12185225 3` UTR,exon CG13175 +,CG33964 + chr2R 12186684 exon Cyp6g1 + chr2R 12188144 3` UTR Cyp6g1 + chr2R_36_12185001 chr2R_12185001 RAL-109_125b 1529 chr2R 12187478 12187501 chr2R 12190051 12190067 22 2572 188.5 207.5 198.0 0.1 2589 chr2R 12187478 exon Cyp6g1 + chr2R 12188772 exon Cyp6g2 - chr2R 12190067 exon Cyp6g2 - chr2R_22_12185001 chr2R_12185001 RAL-109_125b 1530 chr2R 12187475 12187536 chr2R 12190069 12190122 109 2579 228.5 185.5 207.0 0.5 2647 chr2R 12187475 exon Cyp6g1 + chr2R 12188798 exon Cyp6g2 - chr2R 12190122 exon Cyp6g2 - chr2R_109_12185001 chr2R_12185001 RAL-109_125b 1531 chr2R 12187472 12187533 chr2R 12190123 12190123 6 2610 225.0 107.0 166.0 0.0 2651 chr2R 12187472 exon Cyp6g1 + chr2R 12188798 exon Cyp6g2 - chr2R 12190123 exon Cyp6g2 - chr2R_6_12185001 chr2R_12185001 RAL-109_125b 1532 chr2R 12213853 12213860 chr2R 12213982 12213989 8 129 4.0 7.5 5.8 1.2 136 chr2R 12213853 intergenic CG13171 + chr2R 12213921 intergenic CG13171 + chr2R 12213989 intergenic CG13171 + chr2R_8_12210001 chr2R_12210001 RAL-109_125b 1533 chr2R 12279008 12279058 chr2R 12279171 12279221 16 163 3.5 6.5 5.0 2.7 213 chr2R 12279008 intergenic Cam + chr2R 12279114 intergenic Cam + chr2R 12279221 intergenic Cam + chr2R_16_12275001 chr2R_12275001 RAL-109_125b 1534 chr2R 12301833 12301908 chr2R 12301954 12302035 33 120 5.5 10.0 7.8 3.7 202 chr2R 12301833 intron CG8850 - chr2R 12301934 intron CG8850 - chr2R 12302035 intron CG8850 - chr2R_33_12300001 chr2R_12300001 RAL-109_125b 1535 chr2R 12370956 12370999 chr2R 12371189 12371232 17 232 7.0 9.5 8.2 1.8 276 chr2R 12370956 intergenic CG33012 + chr2R 12371094 intergenic CG33012 +,CG13160 + chr2R 12371232 intergenic CG33012 +,CG13160 + chr2R_17_12370001 chr2R_12370001 RAL-109_125b 1536 chr2R 12481144 12481163 chr2R 12482950 12483000 roo 13 1831 5.5 9.0 7.2 1.6 1856 chr2R 12481144 exon Dh44-R2 + chr2R 12482072 intron Dh44-R2 + chr2R 12483000 intron Dh44-R2 + chr2R_13_12480001 chr2R_12480001 RAL-109_125b 1537 chr2R 12501672 12501711 chr2R 12503859 12503923 Rt1c 11 2192 11.5 6.0 8.8 1.1 2251 chr2R 12501672 intron fdl - chr2R 12502798 intron fdl - chr2R 12503923 intron fdl - chr2R_11_12500001 chr2R_12500001 RAL-109_125b 1538 chr2R 12565514 12565594 chr2R 12565944 12565993 22 400 0.0 3.5 1.8 7.9 479 chr2R 12565514 intergenic not near genes chr2R 12565754 intergenic Cyp301a1 + chr2R 12565993 intergenic Cyp301a1 + chr2R_22_12565001 chr2R_12565001 RAL-109_125b 1539 chr2R 12602760 12602835 chr2R 12602894 12602969 26 134 7.0 7.5 7.2 3.2 209 chr2R 12602760 intron Amph + chr2R 12602864 intron Amph + chr2R 12602969 intron Amph + chr2R_26_12600001 chr2R_12600001 RAL-109_125b 1540 chr2R 12608335 12608401 chr2R 12608469 12608535 25 134 10.0 11.0 10.5 2.2 200 chr2R 12608335 intron Amph + chr2R 12608435 intron Amph + chr2R 12608535 intron Amph + chr2R_25_12605001 chr2R_12605001 RAL-109_125b 1541 chr2R 12677298 12677306 chr2R 12677449 12677457 8 151 1.0 11.0 6.0 1.1 159 chr2R 12677298 intron CG42708 - chr2R 12677378 intron CG42708 - chr2R 12677457 intron CG42708 - chr2R_8_12675001 chr2R_12675001 RAL-109_125b 1542 chr2R 12707472 12707547 chr2R 12715888 12715963 roo 22 8416 9.0 4.0 6.5 2.9 8491 chr2R 12707472 intron CG42663 + chr2R 12711718 intron CG42663 + chr2R 12715963 intron CG42663 + chr2R_22_12710001 chr2R_12710001 RAL-109_125b 1543 chr2R 12777752 12777824 chr2R 12777906 12777983 12 156 1.5 2.0 1.8 4.3 231 chr2R 12777752 5` UTR CR45266 + chr2R 12777868 5` UTR CR45266 + chr2R 12777983 5` UTR CR45266 + chr2R_12_12775001 chr2R_12775001 RAL-109_125b 1544 chr2R 12789255 12789292 chr2R 12797661 12797705 roo 10 8405 6.0 4.5 5.2 1.6 8450 chr2R 12789255 intron,3` UTR sca +,CR45137 - chr2R 12793480 intron,intron sca +,CR45137 - chr2R 12797705 intron,3` UTR sca +,CR45137 - chr2R_10_12790001 chr2R_12790001 RAL-109_125b 1545 chr2R 12789293 12789327 chr2R 12797660 12797705 roo 13 8395 3.5 4.0 3.8 2.7 8412 chr2R 12789293 intron,3` UTR sca +,CR45137 - chr2R 12793499 intron,intron sca +,CR45137 - chr2R 12797705 intron,3` UTR sca +,CR45137 - chr2R_13_12790001 chr2R_12790001 RAL-109_125b 1546 chr2R 12819406 12819419 chr2R 12824533 12824546 jockey 4 5127 9.0 5.5 7.2 0.5 5140 chr2R 12819406 intergenic not near genes chr2R 12821976 intergenic not near genes chr2R 12824546 intergenic not near genes chr2R_4_12820001 chr2R_12820001 RAL-109_125b 1547 chr2R 12819424 12819466 chr2R 12824531 12824548 jockey 12 5117 5.0 5.5 5.2 1.9 5124 chr2R 12819424 intergenic not near genes chr2R 12821986 intergenic not near genes chr2R 12824548 intergenic not near genes chr2R_12_12820001 chr2R_12820001 RAL-109_125b 1548 chr2R 12896065 12896068 chr2R 12896205 12896208 5 140 11.5 5.0 8.2 0.5 143 chr2R 12896065 intron vg + chr2R 12896136 intron vg + chr2R 12896208 intron vg + chr2R_5_12895001 chr2R_12895001 RAL-109_125b 1549 chr2R 12897415 12897422 chr2R 12897556 12897563 4 141 7.0 0.5 3.8 0.8 148 chr2R 12897415 intron vg + chr2R 12897489 intron vg + chr2R 12897563 intron vg + chr2R_4_12895001 chr2R_12895001 RAL-109_125b 1550 chr2R 12897426 12897486 chr2R 12897553 12897627 8 139 0.0 0.5 0.2 6.7 201 chr2R 12897426 intron vg + chr2R 12897526 intron vg + chr2R 12897627 intron vg + chr2R_8_12895001 chr2R_12895001 RAL-109_125b 1551 chr2R 12950074 12950144 chr2R 12950207 12950277 6 127 6.0 0.0 3.0 1.5 203 chr2R 12950074 exon CG44251 - chr2R 12950176 intron CG44251 - chr2R 12950277 intron CG44251 - chr2R_6_12950001 chr2R_12950001 RAL-109_125b 1552 chr2R 12973401 12973449 chr2R 12973520 12973586 17 131 2.5 8.5 5.5 2.6 185 chr2R 12973401 intron Psc - chr2R 12973494 intron Psc - chr2R 12973586 intron Psc - chr2R_17_12970001 chr2R_12970001 RAL-109_125b 1553 chr2R 13041860 13041894 chr2R 13041991 13042026 10 131 3.5 5.0 4.2 1.9 166 chr2R 13041860 intergenic not near genes chr2R 13041943 intergenic not near genes chr2R 13042026 intergenic not near genes chr2R_10_13040001 chr2R_13040001 RAL-109_125b 1554 chr2R 13043015 13043040 chr2R 13043145 13043170 7 130 0.0 9.5 4.8 1.2 155 chr2R 13043015 intergenic not near genes chr2R 13043092 intergenic not near genes chr2R 13043170 intergenic not near genes chr2R_7_13040001 chr2R_13040001 RAL-109_125b 1555 chr2R 13054578 13054645 chr2R 13054830 13054903 17 254 0.0 6.0 3.0 4.2 325 chr2R 13054578 intergenic not near genes chr2R 13054740 intergenic not near genes chr2R 13054903 intergenic Drl-2 - chr2R_17_13050001 chr2R_13050001 RAL-109_125b 1556 chr2R 13089715 13089769 chr2R 13089875 13089929 23 152 5.5 7.0 6.2 3.2 214 chr2R 13089715 intergenic not near genes chr2R 13089822 intergenic not near genes chr2R 13089929 intergenic not near genes chr2R_23_13085001 chr2R_13085001 RAL-109_125b 1557 chr2R 13106372 13106429 chr2R 13106500 13106522 23 123 4.0 14.5 9.2 2.3 150 chr2R 13106372 intergenic not near genes chr2R 13106447 intergenic not near genes chr2R 13106522 intergenic not near genes chr2R_23_13105001 chr2R_13105001 RAL-109_125b 1558 chr2R 13122745 13122769 chr2R 13122888 13122912 12 143 3.5 0.0 1.8 4.3 167 chr2R 13122745 intron CG13325 + chr2R 13122828 intron CG13325 + chr2R 13122912 intron CG13325 + chr2R_12_13120001 chr2R_13120001 RAL-109_125b 1559 chr2R 13136799 13136860 chr2R 13141645 13141698 Doc 26 4844 10.0 9.5 9.8 2.4 4899 chr2R 13136799 exon Cap-G + chr2R 13139248 intron Cap-G + chr2R 13141698 intron Cap-G + chr2R_26_13135001 chr2R_13135001 RAL-109_125b 1560 chr2R 13167360 13167415 chr2R 13167492 13167547 22 132 10.0 0.0 5.0 3.7 187 chr2R 13167360 intron GLaz - chr2R 13167454 intron GLaz - chr2R 13167547 intron GLaz - chr2R_22_13165001 chr2R_13165001 RAL-109_125b 1561 chr2R 13170670 13170746 chr2R 13170809 13170870 31 138 4.5 7.0 5.8 4.6 200 chr2R 13170670 3` UTR,3` UTR Spt-I +,CR45142 - chr2R 13170770 intergenic CR45142 -,Spt-I + chr2R 13170870 intergenic CR45142 -,Spt-I + chr2R_31_13170001 chr2R_13170001 RAL-109_125b 1562 chr2R 13194812 13194850 chr2R 13194946 13194953 6 124 13.5 10.5 12.0 0.5 141 chr2R 13194812 intergenic not near genes chr2R 13194882 intergenic not near genes chr2R 13194953 intergenic not near genes chr2R_6_13190001 chr2R_13190001 RAL-109_125b 1563 chr2R 13249522 13249595 chr2R 13249661 13249714 30 134 8.5 0.5 4.5 5.5 192 chr2R 13249522 intron CG4712 - chr2R 13249618 intron CG4712 - chr2R 13249714 intron CG4712 - chr2R_30_13245001 chr2R_13245001 RAL-109_125b 1564 chr2R 13257233 13257297 chr2R 13257347 13257427 19 121 5.5 4.0 4.8 3.3 194 chr2R 13257233 exon CG4716 + chr2R 13257330 exon CG4716 + chr2R 13257427 3` UTR CG4716 + chr2R_19_13255001 chr2R_13255001 RAL-109_125b 1565 chr2R 13432907 13432961 chr2R 13433018 13433087 6 122 13.5 12.5 13.0 0.4 180 chr2R 13432907 intron CG42321 - chr2R 13432997 intron CG42321 - chr2R 13433087 intron,5` UTR CG42321 -,CG30065 + chr2R_6_13430001 chr2R_13430001 RAL-109_125b 1566 chr2R 13439085 13439223 chr2R 13439273 13439349 22 184 2.0 10.5 6.2 3.1 264 chr2R 13439085 intergenic CG42321 -,cnn - chr2R 13439217 intergenic cnn -,CG42321 - chr2R 13439349 3` UTR cnn - chr2R_22_13435001 chr2R_13435001 RAL-109_125b 1567 chr2R 13468480 13468542 chr2R 13469258 13469329 27 784 7.5 9.5 8.5 2.8 849 chr2R 13468480 intron arr - chr2R 13468904 intron arr - chr2R 13469329 intron arr - chr2R_27_13465001 chr2R_13465001 RAL-109_125b 1568 chr2R 13532469 13532523 chr2R 13532635 13532689 16 164 7.0 7.0 7.0 2.0 220 chr2R 13532469 intron Vmat - chr2R 13532579 intron Vmat - chr2R 13532689 intron Vmat - chr2R_16_13530001 chr2R_13530001 RAL-109_125b 1569 chr2R 13547032 13547101 chr2R 13547278 13547346 21 244 8.5 9.5 9.0 2.1 314 chr2R 13547032 intron CG6145 - chr2R 13547189 intron CG6145 - chr2R 13547346 intron CG6145 - chr2R_21_13545001 chr2R_13545001 RAL-109_125b 1570 chr2R 13554695 13554772 chr2R 13554830 13554907 10 135 0.0 7.5 3.8 2.1 212 chr2R 13554695 intron Roe1 + chr2R 13554801 intron Roe1 + chr2R 13554907 intron Roe1 + chr2R_10_13550001 chr2R_13550001 RAL-109_125b 1571 chr2R 13574353 13574427 chr2R 13574484 13574558 28 127 6.0 4.0 5.0 4.7 205 chr2R 13574353 intergenic CG42808 - chr2R 13574456 intergenic CG42808 -,CR44365 + chr2R 13574558 intergenic CG42808 -,CR44365 + chr2R_28_13570001 chr2R_13570001 RAL-109_125b 1572 chr2R 13580484 13580502 chr2R 13580877 13580902 jockey 8 398 1.0 8.5 4.8 1.4 418 chr2R 13580484 3` UTR CG6191 - chr2R 13580693 3` UTR,3` UTR CG6191 -,CG45088 - chr2R 13580902 3` UTR,3` UTR CG6191 -,CG45088 - chr2R_8_13580001 chr2R_13580001 RAL-109_125b 1573 chr2R 13622170 13622193 chr2R 13622298 13622321 12 128 4.5 14.5 9.5 1.1 151 chr2R 13622170 intergenic not near genes chr2R 13622246 intergenic not near genes chr2R 13622321 intergenic not near genes chr2R_12_13620001 chr2R_13620001 RAL-109_125b 1574 chr2R 13652658 13652735 chr2R 13652787 13652864 24 126 3.5 5.0 4.2 4.6 206 chr2R 13652658 intron fas + chr2R 13652761 intron fas + chr2R 13652864 intron fas + chr2R_24_13650001 chr2R_13650001 RAL-109_125b 1575 chr2R 13653439 13653515 chr2R 13653750 13653773 27 304 8.5 10.5 9.5 2.6 334 chr2R 13653439 intron fas + chr2R 13653606 intron fas + chr2R 13653773 intron fas + chr2R_27_13650001 chr2R_13650001 RAL-109_125b 1576 chr2R 13709801 13709852 chr2R 13709944 13709995 24 142 4.0 12.5 8.2 2.6 194 chr2R 13709801 intron fas + chr2R 13709898 intron fas + chr2R 13709995 intron fas + chr2R_24_13705001 chr2R_13705001 RAL-109_125b 1577 chr2R 13726256 13726268 chr2R 13726438 13726450 5 182 2.0 5.0 3.5 1.1 194 chr2R 13726256 exon fas + chr2R 13726353 intron fas + chr2R 13726450 intron fas + chr2R_5_13725001 chr2R_13725001 RAL-109_125b 1578 chr2R 13728085 13728166 chr2R 13735792 13735873 opus 18 7704 7.5 7.0 7.2 2.2 7788 chr2R 13728085 intron fas + chr2R 13731979 intron fas + chr2R 13735873 intron fas + chr2R_18_13730001 chr2R_13730001 RAL-109_125b 1579 chr2R 13747987 13748046 chr2R 13748114 13748175 30 126 5.5 8.5 7.0 3.8 188 chr2R 13747987 3` UTR fas + chr2R 13748081 3` UTR fas + chr2R 13748175 3` UTR fas + chr2R_30_13745001 chr2R_13745001 RAL-109_125b 1580 chr2R 13768941 13768964 chr2R 13769090 13769113 6 149 16.5 11.0 13.8 0.4 172 chr2R 13768941 intergenic not near genes chr2R 13769027 intergenic not near genes chr2R 13769113 intergenic not near genes chr2R_6_13765001 chr2R_13765001 RAL-109_125b 1581 chr2R 13768969 13769003 chr2R 13769088 13769152 13 146 9.0 11.0 10.0 1.2 183 chr2R 13768969 intergenic not near genes chr2R 13769060 intergenic not near genes chr2R 13769152 intergenic not near genes chr2R_13_13765001 chr2R_13765001 RAL-109_125b 1582 chr2R 13790282 13790319 chr2R 13790408 13790419 6 122 10.5 1.5 6.0 0.9 137 chr2R 13790282 intergenic not near genes chr2R 13790350 intergenic not near genes chr2R 13790419 intergenic not near genes chr2R_6_13790001 chr2R_13790001 RAL-109_125b 1583 chr2R 13793112 13793161 chr2R 13793238 13793252 16 123 9.5 8.0 8.8 1.6 140 chr2R 13793112 intergenic not near genes chr2R 13793182 intergenic not near genes chr2R 13793252 intergenic not near genes chr2R_16_13790001 chr2R_13790001 RAL-109_125b 1584 chr2R 13827491 13827541 chr2R 13827714 13827764 18 221 3.5 7.0 5.2 2.9 273 chr2R 13827491 intron CG6329 + chr2R 13827628 intron CG6329 + chr2R 13827764 intron CG6329 + chr2R_18_13825001 chr2R_13825001 RAL-109_125b 1585 chr2R 13905552 13905634 chr2R 13907584 13907591 Rt1a 16 2015 4.5 5.0 4.8 2.8 2039 chr2R 13905552 intron shot - chr2R 13906572 intron shot - chr2R 13907591 intron shot - chr2R_16_13905001 chr2R_13905001 RAL-109_125b 1586 chr2R 13925859 13925891 chr2R 13926045 13926076 8 184 10.5 14.5 12.5 0.6 217 chr2R 13925859 intron shot - chr2R 13925968 intron shot - chr2R 13926076 intron shot - chr2R_8_13925001 chr2R_13925001 RAL-109_125b 1587 chr2R 14014775 14014835 chr2R 14015059 14015119 33 282 11.5 9.5 10.5 2.9 344 chr2R 14014775 intron mam + chr2R 14014947 intron mam + chr2R 14015119 intron mam + chr2R_33_14010001 chr2R_14010001 RAL-109_125b 1588 chr2R 14018134 14018181 chr2R 14018250 14018305 13 131 4.5 5.0 4.8 2.2 171 chr2R 14018134 intron mam + chr2R 14018220 intron mam + chr2R 14018305 intron mam + chr2R_13_14015001 chr2R_14015001 RAL-109_125b 1589 chr2R 14036548 14036577 chr2R 14036684 14036713 9 136 9.0 5.5 7.2 1.1 165 chr2R 14036548 intron mam + chr2R 14036630 intron mam + chr2R 14036713 intron mam + chr2R_9_14035001 chr2R_14035001 RAL-109_125b 1590 chr2R 14037214 14037281 chr2R 14037347 14037414 9 131 3.0 7.5 5.2 1.5 200 chr2R 14037214 intron mam + chr2R 14037314 intron mam + chr2R 14037414 intron mam + chr2R_9_14035001 chr2R_14035001 RAL-109_125b 1591 chr2R 14050805 14050843 chr2R 14050943 14050964 10 128 11.5 14.0 12.8 0.7 159 chr2R 14050805 intron mam + chr2R 14050884 intron mam + chr2R 14050964 intron mam + chr2R_10_14050001 chr2R_14050001 RAL-109_125b 1592 chr2R 14054538 14054553 chr2R 14054669 14054691 5 134 11.0 10.5 10.8 0.4 153 chr2R 14054538 intron mam + chr2R 14054614 intron mam + chr2R 14054691 intron mam + chr2R_5_14050001 chr2R_14050001 RAL-109_125b 1593 chr2R 14054554 14054598 chr2R 14054665 14054736 14 132 6.0 9.0 7.5 1.6 182 chr2R 14054554 intron mam + chr2R 14054645 intron mam + chr2R 14054736 intron mam + chr2R_14_14050001 chr2R_14050001 RAL-109_125b 1594 chr2R 14284994 14285051 chr2R 14285139 14285188 14 144 4.5 4.0 4.2 2.7 194 chr2R 14284994 intron Ih + chr2R 14285091 intron Ih + chr2R 14285188 intron Ih + chr2R_14_14285001 chr2R_14285001 RAL-109_125b 1595 chr2R 14288149 14288167 chr2R 14288268 14288296 7 128 14.0 6.5 10.2 0.6 147 chr2R 14288149 intron Ih + chr2R 14288222 intron Ih + chr2R 14288296 intron Ih + chr2R_7_14285001 chr2R_14285001 RAL-109_125b 1596 chr2R 14288170 14288211 chr2R 14288258 14288340 16 123 9.0 7.0 8.0 1.8 170 chr2R 14288170 intron Ih + chr2R 14288255 intron Ih + chr2R 14288340 intron Ih + chr2R_16_14285001 chr2R_14285001 RAL-109_125b 1597 chr2R 14294786 14294861 chr2R 14294916 14294945 36 122 6.0 8.0 7.0 4.5 159 chr2R 14294786 intron Ih + chr2R 14294866 intron Ih + chr2R 14294945 intron Ih + chr2R_36_14290001 chr2R_14290001 RAL-109_125b 1598 chr2R 14357505 14357575 chr2R 14357645 14357707 31 137 8.5 4.5 6.5 4.1 202 chr2R 14357505 intergenic CG8617 -,Arc1 - chr2R 14357606 intergenic Arc1 -,CG8617 - chr2R 14357707 intergenic Arc1 -,CG8617 - chr2R_31_14355001 chr2R_14355001 RAL-109_125b 1599 chr2R 14467255 14467327 chr2R 14476463 14476535 roo 29 9205 9.0 11.0 10.0 2.6 9280 chr2R 14467255 intergenic not near genes chr2R 14471895 intergenic not near genes chr2R 14476535 5` UTR CR44462 + chr2R_29_14470001 chr2R_14470001 RAL-109_125b 1600 chr2R 14486244 14486315 chr2R 14486427 14486498 21 183 8.0 4.5 6.2 2.9 254 chr2R 14486244 intron L + chr2R 14486371 intron L + chr2R 14486498 intron L + chr2R_21_14485001 chr2R_14485001 RAL-109_125b 1601 chr2R 14497365 14497417 chr2R 14498592 14498632 1360 12 1226 2.5 8.0 5.2 1.9 1267 chr2R 14497365 3` UTR Cpsf160 - chr2R 14497998 intron Cpsf160 - chr2R 14498632 3` UTR Cpsf160 - chr2R_12_14495001 chr2R_14495001 RAL-109_125b 1602 chr2R 14514435 14514500 chr2R 14514578 14514643 20 141 8.0 2.5 5.2 3.2 208 chr2R 14514435 intron,exon Cpr51A -,CG30197 + chr2R 14514539 intron,intron Cpr51A -,CG30197 + chr2R 14514643 intron,intron Cpr51A -,CG30197 + chr2R_20_14510001 chr2R_14510001 RAL-109_125b 1603 chr2R 14517805 14517828 chr2R 14518112 14518139 10 309 9.5 15.0 12.2 0.8 334 chr2R 14517805 intergenic not near genes chr2R 14517972 intergenic not near genes chr2R 14518139 intergenic not near genes chr2R_10_14515001 chr2R_14515001 RAL-109_125b 1604 chr2R 14530335 14530373 chr2R 14530474 14530512 9 137 7.0 7.0 7.0 1.1 177 chr2R 14530335 intron ttv + chr2R 14530424 intron ttv + chr2R 14530512 intron ttv + chr2R_9_14530001 chr2R_14530001 RAL-109_125b 1605 chr2R 14530714 14530777 chr2R 14530824 14530894 21 120 5.5 8.5 7.0 2.6 180 chr2R 14530714 intron ttv + chr2R 14530804 intron ttv + chr2R 14530894 intron ttv + chr2R_21_14530001 chr2R_14530001 RAL-109_125b 1606 chr2R 14533729 14533782 chr2R 14533861 14533915 11 132 4.0 4.5 4.2 2.1 186 chr2R 14533729 intron ttv + chr2R 14533822 intron ttv + chr2R 14533915 intron ttv + chr2R_11_14530001 chr2R_14530001 RAL-109_125b 1607 chr2R 14538929 14538946 chr2R 14539041 14539046 4 112 17.0 10.0 13.5 0.3 117 chr2R 14538929 intron ttv + chr2R 14538988 intron ttv + chr2R 14539046 intron ttv + chr2R_4_14535001 chr2R_14535001 RAL-109_125b 1608 chr2R 14538951 14538985 chr2R 14539036 14539057 8 94 8.0 9.5 8.8 0.8 106 chr2R 14538951 intron ttv + chr2R 14539004 intron ttv + chr2R 14539057 intron ttv + chr2R_8_14535001 chr2R_14535001 RAL-109_125b 1609 chr2R 14566400 14566461 chr2R 14566537 14566598 21 137 9.5 8.5 9.0 2.1 198 chr2R 14566400 intron ttv + chr2R 14566499 intron ttv + chr2R 14566598 intron ttv + chr2R_21_14565001 chr2R_14565001 RAL-109_125b 1610 chr2R 14566945 14567011 chr2R 14567078 14567144 20 122 10.0 10.5 10.2 1.8 199 chr2R 14566945 intron ttv + chr2R 14567044 intron ttv + chr2R 14567144 intron ttv + chr2R_20_14565001 chr2R_14565001 RAL-109_125b 1611 chr2R 14653839 14653849 chr2R 14653974 14653974 7 133 16.0 8.0 12.0 0.5 135 chr2R 14653839 intergenic not near genes chr2R 14653906 intergenic not near genes chr2R 14653974 intergenic not near genes chr2R_7_14650001 chr2R_14650001 RAL-109_125b 1612 chr2R 14653850 14653917 chr2R 14653971 14654001 29 126 6.5 6.5 6.5 3.9 151 chr2R 14653850 intergenic not near genes chr2R 14653926 intergenic not near genes chr2R 14654001 intergenic not near genes chr2R_29_14650001 chr2R_14650001 RAL-109_125b 1613 chr2R 14657500 14657504 chr2R 14657627 14657631 5 127 7.0 0.5 3.8 1.0 131 chr2R 14657500 intron Adgf-E - chr2R 14657566 intron Adgf-E - chr2R 14657631 intron Adgf-E - chr2R_5_14655001 chr2R_14655001 RAL-109_125b 1614 chr2R 14722269 14722299 chr2R 14722423 14722428 9 149 6.5 0.5 3.5 2.0 159 chr2R 14722269 intergenic not near genes chr2R 14722348 intergenic not near genes chr2R 14722428 intergenic not near genes chr2R_9_14720001 chr2R_14720001 RAL-109_125b 1615 chr2R 14737589 14737639 chr2R 14737723 14737772 11 127 8.0 12.5 10.2 1.0 183 chr2R 14737589 3` UTR CR43428 - chr2R 14737680 3` UTR CR43428 - chr2R 14737772 3` UTR CR43428 - chr2R_11_14735001 chr2R_14735001 RAL-109_125b 1616 chr2R 14796291 14796360 chr2R 14796438 14796507 22 147 4.0 7.0 5.5 3.4 216 chr2R 14796291 intron kn - chr2R 14796399 intron kn - chr2R 14796507 intron kn - chr2R_22_14795001 chr2R_14795001 RAL-109_125b 1617 chr2R 14816062 14816136 chr2R 14816203 14816207 26 133 8.5 8.0 8.2 2.8 145 chr2R 14816062 intergenic not near genes chr2R 14816134 intergenic not near genes chr2R 14816207 intergenic not near genes chr2R_26_14815001 chr2R_14815001 RAL-109_125b 1618 chr2R 14889184 14889242 chr2R 14897839 14897889 Max-element 9 8648 11.5 1.5 6.5 1.2 8705 chr2R 14889184 intergenic Cyp6a8 - chr2R 14893536 intergenic not near genes chr2R 14897889 intergenic not near genes chr2R_9_14890001 chr2R_14890001 RAL-109_125b 1619 chr2R 14911650 14911725 chr2R 14911823 14911898 31 171 6.0 5.5 5.8 4.6 248 chr2R 14911650 intron CG10249 - chr2R 14911774 intron CG10249 - chr2R 14911898 intron CG10249 - chr2R_31_14910001 chr2R_14910001 RAL-109_125b 1620 chr2R 14922093 14922144 chr2R 14922219 14922259 26 123 14.0 11.5 12.8 1.9 166 chr2R 14922093 intron CG10249 - chr2R 14922176 intron CG10249 - chr2R 14922259 intron CG10249 - chr2R_26_14920001 chr2R_14920001 RAL-109_125b 1621 chr2R 14930803 14930847 chr2R 14930946 14930955 9 139 0.0 0.5 0.2 7.5 152 chr2R 14930803 intron CG10253 - chr2R 14930879 intron CG10253 - chr2R 14930955 intron CG10253 - chr2R_9_14930001 chr2R_14930001 RAL-109_125b 1622 chr2R 14979720 14979787 chr2R 14979846 14979913 29 126 11.0 8.5 9.8 2.7 193 chr2R 14979720 3` UTR ckn + chr2R 14979816 3` UTR ckn + chr2R 14979913 3` UTR ckn + chr2R_29_14975001 chr2R_14975001 RAL-109_125b 1623 chr2R 14987340 14987414 chr2R 14987534 14987558 28 192 7.0 6.0 6.5 3.7 218 chr2R 14987340 intron pcs + chr2R 14987449 intron pcs + chr2R 14987558 intron pcs + chr2R_28_14985001 chr2R_14985001 RAL-109_125b 1624 chr2R 14998470 14998512 chr2R 14998660 14998702 14 190 7.5 10.0 8.8 1.4 232 chr2R 14998470 intergenic not near genes chr2R 14998586 intergenic not near genes chr2R 14998702 intergenic not near genes chr2R_14_14995001 chr2R_14995001 RAL-109_125b 1625 chr2R 15006135 15006158 chr2R 15006280 15006303 5 145 10.5 14.5 12.5 0.4 168 chr2R 15006135 intergenic not near genes chr2R 15006219 intergenic not near genes chr2R 15006303 intergenic not near genes chr2R_5_15005001 chr2R_15005001 RAL-109_125b 1626 chr2R 15015415 15015480 chr2R 15022889 15022954 mdg1 25 7472 6.0 8.0 7.0 3.1 7539 chr2R 15015415 intron hbs + chr2R 15019184 intron hbs + chr2R 15022954 intron hbs + chr2R_25_15015001 chr2R_15015001 RAL-109_125b 1627 chr2R 15065591 15065639 chr2R 15065692 15065767 9 110 6.0 5.5 5.8 1.3 176 chr2R 15065591 intergenic not near genes chr2R 15065679 intergenic not near genes chr2R 15065767 intergenic not near genes chr2R_9_15065001 chr2R_15065001 RAL-109_125b 1628 chr2R 15084934 15084948 chr2R 15092033 15092045 297 5 7099 20.0 9.5 14.8 0.3 7111 chr2R 15084934 intergenic not near genes chr2R 15088490 intergenic not near genes chr2R 15092045 5` UTR CR44457 + chr2R_5_15085001 chr2R_15085001 RAL-109_125b 1629 chr2R 15084958 15085000 chr2R 15092026 15092095 297 5 7092 9.0 7.0 8.0 0.6 7137 chr2R 15084958 intergenic not near genes chr2R 15088526 intergenic not near genes chr2R 15092095 5` UTR CR44457 + chr2R_5_15085001 chr2R_15085001 RAL-109_125b 1630 chr2R 15095329 15095365 chr2R 15095456 15095492 10 122 10.0 9.0 9.5 1.0 163 chr2R 15095329 intergenic not near genes chr2R 15095410 intergenic not near genes chr2R 15095492 intergenic not near genes chr2R_10_15095001 chr2R_15095001 RAL-109_125b 1631 chr2R 15095368 15095373 chr2R 15095450 15095480 5 98 9.5 8.0 8.8 0.5 112 chr2R 15095368 intergenic not near genes chr2R 15095424 intergenic not near genes chr2R 15095480 intergenic not near genes chr2R_5_15095001 chr2R_15095001 RAL-109_125b 1632 chr2R 15095374 15095396 chr2R 15095441 15095463 10 108 9.5 8.0 8.8 1.0 89 chr2R 15095374 intergenic not near genes chr2R 15095418 intergenic not near genes chr2R 15095463 intergenic not near genes chr2R_10_15095001 chr2R_15095001 RAL-109_125b 1633 chr2R 15100997 15101045 chr2R 15101114 15101190 20 140 3.5 4.5 4.0 4.0 193 chr2R 15100997 intergenic not near genes chr2R 15101094 intergenic not near genes chr2R 15101190 intergenic not near genes chr2R_20_15100001 chr2R_15100001 RAL-109_125b 1634 chr2R 15119289 15119341 chr2R 15127802 15127859 Tirant 17 8524 10.5 11.0 10.8 1.4 8570 chr2R 15119289 intron chn + chr2R 15123574 intron chn + chr2R 15127859 intron chn + chr2R_17_15120001 chr2R_15120001 RAL-109_125b 1635 chr2R 15196054 15196118 chr2R 15196191 15196264 19 140 8.5 9.0 8.8 1.9 210 chr2R 15196054 intergenic not near genes chr2R 15196159 intergenic not near genes chr2R 15196264 intergenic not near genes chr2R_19_15195001 chr2R_15195001 RAL-109_125b 1636 chr2R 15230368 15230395 chr2R 15230645 15230672 6 277 22.5 0.0 11.2 0.5 304 chr2R 15230368 intron,5` UTR Fs -,CR44370 + chr2R 15230520 intron,5` UTR Fs -,CR44370 + chr2R 15230672 intron,5` UTR Fs -,CR44370 + chr2R_6_15230001 chr2R_15230001 RAL-109_125b 1637 chr2R 15230355 15230359 chr2R 15231010 15231015 5 655 30.5 2.5 16.5 0.3 660 chr2R 15230355 intron,5` UTR Fs -,CR44370 + chr2R 15230685 intron,5` UTR Fs -,CR44370 + chr2R 15231015 intron,5` UTR Fs -,CR44370 + chr2R_5_15230001 chr2R_15230001 RAL-109_125b 1638 chr2R 15296115 15296171 chr2R 15296243 15296292 22 131 4.0 8.0 6.0 3.1 177 chr2R 15296115 intron Trpm - chr2R 15296204 intron Trpm - chr2R 15296292 intron Trpm - chr2R_22_15295001 chr2R_15295001 RAL-109_125b 1639 chr2R 15340653 15340665 chr2R 15349281 15349281 Tirant 15 8631 26.0 6.5 16.2 0.9 8628 chr2R 15340653 intron unc-5 + chr2R 15344967 intron unc-5 + chr2R 15349281 intron unc-5 + chr2R_15_15340001 chr2R_15340001 RAL-109_125b 1640 chr2R 15363628 15363641 chr2R 15363751 15363772 6 126 15.5 10.0 12.8 0.4 144 chr2R 15363628 intron unc-5 + chr2R 15363700 intron unc-5 + chr2R 15363772 intron unc-5 + chr2R_6_15360001 chr2R_15360001 RAL-109_125b 1641 chr2R 15363645 15363681 chr2R 15363750 15363793 15 115 7.0 10.0 8.5 1.6 148 chr2R 15363645 intron unc-5 + chr2R 15363719 intron unc-5 + chr2R 15363793 intron unc-5 + chr2R_15_15360001 chr2R_15360001 RAL-109_125b 1642 chr2R 15655981 15656065 chr2R 15656122 15656206 14 141 0.0 3.5 1.8 5.0 225 chr2R 15655981 intron CG42524 + chr2R 15656094 intron CG42524 + chr2R 15656206 intron CG42524 + chr2R_14_15655001 chr2R_15655001 RAL-109_125b 1643 chr2R 15700210 15700251 chr2R 15700375 15700415 23 163 2.5 10.5 6.5 3.1 205 chr2R 15700210 intron,5` UTR CG30080 -,CG42662 - chr2R 15700312 intron,5` UTR CG30080 -,CG42662 - chr2R 15700415 intron,5` UTR CG30080 -,CG42662 - chr2R_23_15700001 chr2R_15700001 RAL-109_125b 1644 chr2R 15702915 15702968 chr2R 15703042 15703084 7 125 5.5 6.5 6.0 1.0 169 chr2R 15702915 intergenic not near genes chr2R 15703000 intergenic not near genes chr2R 15703084 intergenic not near genes chr2R_7_15700001 chr2R_15700001 RAL-109_125b 1645 chr2R 15747834 15747849 chr2R 15747916 15747956 7 102 7.5 7.5 7.5 0.8 122 chr2R 15747834 intron CG30089 + chr2R 15747895 intron CG30089 + chr2R 15747956 intron CG30089 + chr2R_7_15745001 chr2R_15745001 RAL-109_125b 1646 chr2R 15772587 15772593 chr2R 15772709 15772724 4 128 23.0 8.5 15.8 0.2 137 chr2R 15772587 intron Zasp52 - chr2R 15772656 intron Zasp52 - chr2R 15772724 intron Zasp52 - chr2R_4_15770001 chr2R_15770001 RAL-109_125b 1647 chr2R 15772595 15772654 chr2R 15772705 15772778 22 119 12.5 8.0 10.2 2.0 183 chr2R 15772595 intron Zasp52 - chr2R 15772686 intron Zasp52 - chr2R 15772778 intron Zasp52 - chr2R_22_15770001 chr2R_15770001 RAL-109_125b 1648 chr2R 15828113 15828123 chr2R 15828323 15828333 7 210 5.5 5.0 5.2 1.1 220 chr2R 15828113 intron,intron tun +,Poxn - chr2R 15828223 intron,intron tun +,Poxn - chr2R 15828333 intron,intron tun +,Poxn - chr2R_7_15825001 chr2R_15825001 RAL-109_125b 1649 chr2R 15902848 15902862 chr2R 15902960 15902986 5 118 10.5 7.5 9.0 0.5 138 chr2R 15902848 intron sli - chr2R 15902917 intron sli - chr2R 15902986 intron sli - chr2R_5_15900001 chr2R_15900001 RAL-109_125b 1650 chr2R 15902881 15902900 chr2R 15902958 15903020 7 98 4.0 6.5 5.2 1.1 139 chr2R 15902881 intron sli - chr2R 15902950 intron sli - chr2R 15903020 intron sli - chr2R_7_15900001 chr2R_15900001 RAL-109_125b 1651 chr2R 16054916 16054962 chr2R 16055034 16055075 20 122 9.0 12.5 10.8 1.7 159 chr2R 16054916 intron CG8405 + chr2R 16054996 intron CG8405 + chr2R 16055075 intron CG8405 + chr2R_20_16050001 chr2R_16050001 RAL-109_125b 1652 chr2R 16061689 16061703 chr2R 16064372 16064386 Burdock 5 2683 16.0 10.5 13.2 0.4 2697 chr2R 16061689 intergenic not near genes chr2R 16063038 intergenic not near genes chr2R 16064386 intergenic not near genes chr2R_5_16060001 chr2R_16060001 RAL-109_125b 1653 chr2R 16061704 16061715 chr2R 16064370 16064398 Burdock 10 2679 14.5 10.5 12.5 0.7 2694 chr2R 16061704 intergenic not near genes chr2R 16063051 intergenic not near genes chr2R 16064398 intergenic not near genes chr2R_10_16060001 chr2R_16060001 RAL-109_125b 1654 chr2R 16139159 16139196 chr2R 16139360 16139389 11 197 10.5 3.5 7.0 1.4 230 chr2R 16139159 intron Got1 + chr2R 16139274 intron Got1 + chr2R 16139389 intron Got1 + chr2R_11_16135001 chr2R_16135001 RAL-109_125b 1655 chr2R 16139199 16139232 chr2R 16139359 16139431 4 188 5.0 3.5 4.2 0.8 232 chr2R 16139199 intron Got1 + chr2R 16139315 intron Got1 + chr2R 16139431 intron Got1 + chr2R_4_16135001 chr2R_16135001 RAL-109_125b 1656 chr2R 16245365 16245427 chr2R 16245509 16245571 13 142 2.0 6.0 4.0 2.6 206 chr2R 16245365 intron CngA - chr2R 16245468 intron CngA - chr2R 16245571 intron CngA - chr2R_13_16245001 chr2R_16245001 RAL-109_125b 1657 chr2R 16352796 16352868 chr2R 16352926 16353001 14 133 8.5 1.0 4.8 2.4 205 chr2R 16352796 intergenic not near genes chr2R 16352898 intergenic not near genes chr2R 16353001 intergenic not near genes chr2R_14_16350001 chr2R_16350001 RAL-109_125b 1658 chr2R 16457978 16457994 chr2R 16458108 16458114 4 128 10.0 0.0 5.0 0.7 136 chr2R 16457978 intergenic not near genes chr2R 16458046 intergenic not near genes chr2R 16458114 intergenic not near genes chr2R_4_16455001 chr2R_16455001 RAL-109_125b 1659 chr2R 16503823 16503903 chr2R 16503963 16504028 37 137 7.0 7.0 7.0 4.6 205 chr2R 16503823 intron Sema-2a + chr2R 16503926 intron Sema-2a + chr2R 16504028 intron Sema-2a + chr2R_37_16500001 chr2R_16500001 RAL-109_125b 1660 chr2R 16539603 16539651 chr2R 16544861 16544910 copia 19 5258 8.0 8.5 8.2 2.1 5307 chr2R 16539603 intergenic not near genes chr2R 16542256 intergenic not near genes chr2R 16544910 intergenic not near genes chr2R_19_16540001 chr2R_16540001 RAL-109_125b 1661 chr2R 16571827 16571900 chr2R 16571972 16572045 30 144 8.0 9.0 8.5 3.2 218 chr2R 16571827 intergenic CG4927 + chr2R 16571936 intergenic CG4927 + chr2R 16572045 intergenic CG4927 + chr2R_30_16570001 chr2R_16570001 RAL-109_125b 1662 chr2R 16617067 16617090 chr2R 16617197 16617220 4 130 5.0 13.5 9.2 0.4 153 chr2R 16617067 intron CG5065 + chr2R 16617144 intron CG5065 + chr2R 16617220 intron CG5065 + chr2R_4_16615001 chr2R_16615001 RAL-109_125b 1663 chr2R 16681253 16681284 chr2R 16681379 16681380 6 118 13.0 1.0 7.0 0.8 127 chr2R 16681253 intron CG30463 - chr2R 16681316 intron CG30463 - chr2R 16681380 intron CG30463 - chr2R_6_16680001 chr2R_16680001 RAL-109_125b 1664 chr2R 16683876 16683950 chr2R 16684291 16684358 21 409 5.5 7.5 6.5 2.8 482 chr2R 16683876 intron CG30463 - chr2R 16684117 intron CG30463 - chr2R 16684358 intron CG30463 - chr2R_21_16680001 chr2R_16680001 RAL-109_125b 1665 chr2R 16684502 16684555 chr2R 16686010 16686063 24 1498 53.0 52.5 52.8 0.4 1561 chr2R 16684502 intron CG30463 - chr2R 16685282 intron CG30463 - chr2R 16686063 intron CG30463 - chr2R_24_16685001 chr2R_16685001 RAL-109_125b 1666 chr2R 16708862 16708943 chr2R 16708988 16709060 16 126 0.5 7.5 4.0 3.2 198 chr2R 16708862 intron CG30463 - chr2R 16708961 intron CG30463 - chr2R 16709060 intron CG30463 - chr2R_16_16705001 chr2R_16705001 RAL-109_125b 1667 chr2R 16713063 16713066 chr2R 16713197 16713200 5 134 0.0 23.0 11.5 0.4 137 chr2R 16713063 intron CG30463 - chr2R 16713132 intron CG30463 - chr2R 16713200 intron CG30463 - chr2R_5_16710001 chr2R_16710001 RAL-109_125b 1668 chr2R 16732584 16732638 chr2R 16732718 16732775 24 131 7.5 10.0 8.8 2.4 191 chr2R 16732584 5` UTR CG30463 - chr2R 16732680 5` UTR CG30463 - chr2R 16732775 5` UTR CG30463 - chr2R_24_16730001 chr2R_16730001 RAL-109_125b 1669 chr2R 16739438 16739446 chr2R 16739571 16739579 4 133 9.0 0.0 4.5 0.7 141 chr2R 16739438 intergenic not near genes chr2R 16739508 intergenic not near genes chr2R 16739579 intergenic not near genes chr2R_4_16735001 chr2R_16735001 RAL-109_125b 1670 chr2R 16775598 16775666 chr2R 16775912 16775980 20 313 6.0 7.5 6.8 2.6 382 chr2R 16775598 3` UTR Arp53D + chr2R 16775789 intergenic Arp53D + chr2R 16775980 intergenic Arp53D + chr2R_20_16775001 chr2R_16775001 RAL-109_125b 1671 chr2R 16781158 16781188 chr2R 16781255 16781260 6 94 3.0 8.0 5.5 0.9 102 chr2R 16781158 exon resilin + chr2R 16781209 exon resilin + chr2R 16781260 exon resilin + chr2R_6_16780001 chr2R_16780001 RAL-109_125b 1672 chr2R 16879992 16880062 chr2R 16880119 16880189 15 123 9.5 0.5 5.0 2.5 197 chr2R 16879992 intron CG8910 - chr2R 16880090 intron CG8910 - chr2R 16880189 intron CG8910 - chr2R_15_16880001 chr2R_16880001 RAL-109_125b 1673 chr2R 16888001 16888039 chr2R 16888118 16888167 11 117 8.0 0.5 4.2 2.1 166 chr2R 16888001 intron CG8910 - chr2R 16888084 intron CG8910 - chr2R 16888167 intron CG8910 - chr2R_11_16885001 chr2R_16885001 RAL-109_125b 1674 chr2R 16893726 16893736 chr2R 16893859 16893869 5 133 24.5 3.5 14.0 0.3 143 chr2R 16893726 intron CG8910 - chr2R 16893798 intron CG8910 - chr2R 16893869 intron CG8910 - chr2R_5_16890001 chr2R_16890001 RAL-109_125b 1675 chr2R 16893740 16893800 chr2R 16893858 16893933 19 130 10.0 4.0 7.0 2.4 193 chr2R 16893740 intron CG8910 - chr2R 16893836 intron CG8910 - chr2R 16893933 intron CG8910 - chr2R_19_16890001 chr2R_16890001 RAL-109_125b 1676 chr2R 16930624 16930627 chr2R 16930727 16930755 5 123 0.0 13.0 6.5 0.7 131 chr2R 16930624 intron Pkc53E + chr2R 16930690 intron Pkc53E + chr2R 16930755 intron Pkc53E + chr2R_5_16930001 chr2R_16930001 RAL-109_125b 1677 chr2R 16931461 16931519 chr2R 16931683 16931733 18 220 7.0 11.0 9.0 1.8 272 chr2R 16931461 intron Pkc53E + chr2R 16931597 intron Pkc53E + chr2R 16931733 intron Pkc53E + chr2R_18_16930001 chr2R_16930001 RAL-109_125b 1678 chr2R 16938199 16938258 chr2R 16938586 16938645 17 387 4.0 5.0 4.5 3.1 446 chr2R 16938199 intron Pkc53E + chr2R 16938422 intron Pkc53E + chr2R 16938645 intron Pkc53E + chr2R_17_16935001 chr2R_16935001 RAL-109_125b 1679 chr2R 17147208 17147257 chr2R 17152289 17152324 jockey 23 5077 13.5 12.0 12.8 1.7 5116 chr2R 17147208 intergenic not near genes chr2R 17149766 intergenic not near genes chr2R 17152324 intergenic not near genes chr2R_23_17145001 chr2R_17145001 RAL-109_125b 1680 chr2R 17161305 17161361 chr2R 17161562 17161615 11 255 9.5 2.0 5.8 1.6 310 chr2R 17161305 intergenic CG30457 - chr2R 17161460 intergenic not near genes chr2R 17161615 intergenic not near genes chr2R_11_17160001 chr2R_17160001 RAL-109_125b 1681 chr2R 17168709 17168730 chr2R 17168824 17168863 9 131 0.0 12.0 6.0 1.3 154 chr2R 17168709 intergenic not near genes chr2R 17168786 intergenic not near genes chr2R 17168863 intergenic not near genes chr2R_9_17165001 chr2R_17165001 RAL-109_125b 1682 chr2R 17176353 17176379 chr2R 17182588 17182619 diver 13 6239 0.0 11.5 5.8 1.9 6266 chr2R 17176353 intergenic not near genes chr2R 17179486 intergenic not near genes chr2R 17182619 intergenic not near genes chr2R_13_17175001 chr2R_17175001 RAL-109_125b 1683 chr2R 17221624 17221696 chr2R 17221761 17221805 11 120 3.0 5.0 4.0 2.2 181 chr2R 17221624 intron mbl + chr2R 17221714 intron mbl + chr2R 17221805 intron mbl + chr2R_11_17220001 chr2R_17220001 RAL-109_125b 1684 chr2R 17225267 17225305 chr2R 17225373 17225434 22 119 9.5 8.5 9.0 2.2 167 chr2R 17225267 intron mbl + chr2R 17225350 intron mbl + chr2R 17225434 intron mbl + chr2R_22_17225001 chr2R_17225001 RAL-109_125b 1685 chr2R 17236465 17236479 chr2R 17241719 17241732 copia 6 5252 12.0 5.0 8.5 0.6 5267 chr2R 17236465 intron mbl + chr2R 17239098 intron mbl + chr2R 17241732 intron mbl + chr2R_6_17235001 chr2R_17235001 RAL-109_125b 1686 chr2R 17236482 17236524 chr2R 17241710 17241778 copia 17 5250 8.0 3.0 5.5 2.6 5296 chr2R 17236482 intron mbl + chr2R 17239130 intron mbl + chr2R 17241778 intron mbl + chr2R_17_17235001 chr2R_17235001 RAL-109_125b 1687 chr2R 17261474 17261507 chr2R 17261611 17261644 9 137 4.0 11.0 7.5 1.1 170 chr2R 17261474 intron mbl + chr2R 17261559 intron mbl + chr2R 17261644 intron mbl + chr2R_9_17260001 chr2R_17260001 RAL-109_125b 1688 chr2R 17314089 17314172 chr2R 17314231 17314299 35 134 3.0 8.5 5.8 5.1 210 chr2R 17314089 intron mbl + chr2R 17314194 intron mbl + chr2R 17314299 intron mbl + chr2R_35_17310001 chr2R_17310001 RAL-109_125b 1689 chr2R 17359861 17359871 chr2R 17360002 17360012 5 141 6.5 5.5 6.0 0.7 151 chr2R 17359861 intron mbl + chr2R 17359936 intron mbl + chr2R 17360012 intron mbl + chr2R_5_17355001 chr2R_17355001 RAL-109_125b 1690 chr2R 17389228 17389245 chr2R 17389369 17389380 8 139 12.0 9.0 10.5 0.7 152 chr2R 17389228 intergenic CR44344 - chr2R 17389304 intergenic CR44344 - chr2R 17389380 intergenic CR44344 - chr2R_8_17385001 chr2R_17385001 RAL-109_125b 1691 chr2R 17389247 17389304 chr2R 17389366 17389400 24 126 4.5 7.5 6.0 3.4 153 chr2R 17389247 intergenic CR44344 - chr2R 17389324 intergenic CR44344 - chr2R 17389400 intergenic CR44344 - chr2R_24_17385001 chr2R_17385001 RAL-109_125b 1692 chr2R 17470297 17470352 chr2R 17470432 17470486 10 134 4.0 0.0 2.0 3.3 189 chr2R 17470297 intron qkr54B + chr2R 17470392 intron qkr54B + chr2R 17470486 intron qkr54B + chr2R_10_17470001 chr2R_17470001 RAL-109_125b 1693 chr2R 17478789 17478866 chr2R 17478917 17478941 33 118 7.5 8.0 7.8 3.7 152 chr2R 17478789 3` UTR,intron CG43110 -,veil + chr2R 17478865 3` UTR,intron CG43110 -,veil + chr2R 17478941 3` UTR,intron CG43110 -,veil + chr2R_33_17475001 chr2R_17475001 RAL-109_125b 1694 chr2R 17485875 17485938 chr2R 17490687 17490750 F-element 25 4810 9.0 4.0 6.5 3.3 4875 chr2R 17485875 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17488312 intron NT5E-2 + chr2R 17490750 intron NT5E-2 + chr2R_25_17485001 chr2R_17485001 RAL-109_125b 1695 chr2R 17532210 17532244 chr2R 17532337 17532360 18 121 17.0 15.5 16.2 1.0 150 chr2R 17532210 intron Patronin - chr2R 17532285 intron Patronin - chr2R 17532360 intron Patronin - chr2R_18_17530001 chr2R_17530001 RAL-109_125b 1696 chr2R 17637779 17637860 chr2R 17637910 17637990 10 124 4.0 3.5 3.8 2.1 211 chr2R 17637779 intron CG10936 - chr2R 17637884 intron CG10936 - chr2R 17637990 intron CG10936 - chr2R_10_17635001 chr2R_17635001 RAL-109_125b 1697 chr2R 17640060 17640070 chr2R 17640344 17640354 7 283 21.0 4.0 12.5 0.5 294 chr2R 17640060 intergenic not near genes chr2R 17640207 intergenic not near genes chr2R 17640354 intergenic not near genes chr2R_7_17640001 chr2R_17640001 RAL-109_125b 1698 chr2R 17640074 17640136 chr2R 17640343 17640415 25 274 7.5 4.0 5.8 3.7 341 chr2R 17640074 intergenic not near genes chr2R 17640244 intergenic not near genes chr2R 17640415 intergenic not near genes chr2R_25_17640001 chr2R_17640001 RAL-109_125b 1699 chr2R 17669749 17669794 chr2R 17669895 17669906 4 132 16.5 7.0 11.8 0.3 157 chr2R 17669749 exon CG30108 + chr2R 17669828 3` UTR CG30108 + chr2R 17669906 3` UTR CG30108 + chr2R_4_17665001 chr2R_17665001 RAL-109_125b 1700 chr2R 17679571 17679597 chr2R 17679748 17679774 4 177 0.5 4.5 2.5 1.1 203 chr2R 17679571 intron Sema-1b - chr2R 17679672 intron Sema-1b - chr2R 17679774 intron Sema-1b - chr2R_4_17675001 chr2R_17675001 RAL-109_125b 1701 chr2R 17708348 17708403 chr2R 17708479 17708534 24 130 6.5 6.5 6.5 3.2 186 chr2R 17708348 intron CG6424 - chr2R 17708441 intron CG6424 - chr2R 17708534 intron CG6424 - chr2R_24_17705001 chr2R_17705001 RAL-109_125b 1702 chr2R 17709945 17710110 chr2R 17710086 17710238 16 140 0.0 0.0 0.0 16.0 293 chr2R 17709945 intron CG6424 - chr2R 17710092 intron CG6424 - chr2R 17710238 intron CG6424 - chr2R_16_17710001 chr2R_17710001 RAL-109_125b 1703 chr2R 17782316 17782391 chr2R 17783569 17783634 pogo 24 1252 4.5 5.5 5.0 4.0 1318 chr2R 17782316 intergenic CG33981 -,fab1 - chr2R 17782975 intergenic not near genes chr2R 17783634 intergenic mir-31a - chr2R_24_17780001 chr2R_17780001 RAL-109_125b 1704 chr2R 17783977 17784056 chr2R 17784266 17784320 pogo 18 281 5.5 6.5 6.0 2.6 343 chr2R 17783977 intergenic mir-31a - chr2R 17784148 intergenic mir-31a - chr2R 17784320 intergenic mir-31a - chr2R_18_17780001 chr2R_17780001 RAL-109_125b 1705 chr2R 17849756 17849828 chr2R 17849963 17850035 29 207 0.0 5.5 2.8 7.6 279 chr2R 17849756 intron olf186-F + chr2R 17849896 intron olf186-F + chr2R 17850035 intron olf186-F + chr2R_29_17845001 chr2R_17845001 RAL-109_125b 1706 chr2R 17860133 17860202 chr2R 17860265 17860299 11 128 4.0 8.5 6.2 1.5 166 chr2R 17860133 3` UTR olf186-F + chr2R 17860216 3` UTR olf186-F + chr2R 17860299 3` UTR olf186-F + chr2R_11_17860001 chr2R_17860001 RAL-109_125b 1707 chr2R 17918130 17918183 chr2R 17918248 17918304 13 118 13.0 1.5 7.2 1.6 174 chr2R 17918130 intron Elk + chr2R 17918217 intron Elk + chr2R 17918304 intron Elk + chr2R_13_17915001 chr2R_17915001 RAL-109_125b 1708 chr2R 17921408 17921460 chr2R 17921540 17921592 8 132 0.0 12.0 6.0 1.1 184 chr2R 17921408 intron Elk + chr2R 17921500 intron Elk + chr2R 17921592 intron Elk + chr2R_8_17920001 chr2R_17920001 RAL-109_125b 1709 chr2R 17963276 17963298 chr2R 17963459 17963481 12 182 13.0 10.0 11.5 1.0 205 chr2R 17963276 intergenic not near genes chr2R 17963378 intergenic not near genes chr2R 17963481 intergenic not near genes chr2R_12_17960001 chr2R_17960001 RAL-109_125b 1710 chr2R 18045629 18045690 chr2R 18046031 18046092 jockey 25 401 7.5 8.0 7.8 2.8 463 chr2R 18045629 intergenic not near genes chr2R 18045860 intergenic not near genes chr2R 18046092 intergenic CG5767 - chr2R_25_18045001 chr2R_18045001 RAL-109_125b 1711 chr2R 18074553 18074619 chr2R 18074679 18074740 22 125 6.5 5.0 5.8 3.2 187 chr2R 18074553 intron CG34386 + chr2R 18074646 intron CG34386 + chr2R 18074740 intron CG34386 + chr2R_22_18070001 chr2R_18070001 RAL-109_125b 1712 chr2R 18188419 18188499 chr2R 18188720 18188801 6 302 2.5 3.5 3.0 1.5 382 chr2R 18188419 intron CG33958 - chr2R 18188610 intron CG33958 - chr2R 18188801 intron CG33958 - chr2R_6_18185001 chr2R_18185001 RAL-109_125b 1713 chr2R 18318329 18318341 chr2R 18318460 18318472 6 131 2.0 0.0 1.0 3.0 143 chr2R 18318329 intron sbb - chr2R 18318400 intron sbb - chr2R 18318472 intron sbb - chr2R_6_18315001 chr2R_18315001 RAL-109_125b 1714 chr2R 18358347 18358415 chr2R 18372609 18372627 roo 28 14259 6.0 10.5 8.2 3.0 14280 chr2R 18358347 intergenic not near genes chr2R 18365487 intergenic not near genes chr2R 18372627 intergenic not near genes chr2R_28_18365001 chr2R_18365001 RAL-109_125b 1715 chr2R 18376692 18376756 chr2R 18376832 18376896 18 138 3.5 5.5 4.5 3.3 204 chr2R 18376692 intergenic not near genes chr2R 18376794 intergenic not near genes chr2R 18376896 intergenic not near genes chr2R_18_18375001 chr2R_18375001 RAL-109_125b 1716 chr2R 18390823 18390884 chr2R 18390961 18391022 14 138 3.0 5.0 4.0 2.8 199 chr2R 18390823 intergenic CG15068 - chr2R 18390922 intergenic CG15068 - chr2R 18391022 intergenic CG15068 - chr2R_14_18390001 chr2R_18390001 RAL-109_125b 1717 chr2R 18398124 18398176 chr2R 18398268 18398320 13 140 8.0 0.5 4.2 2.5 196 chr2R 18398124 intron GstE10 - chr2R 18398222 intron GstE10 - chr2R 18398320 intron GstE10 - chr2R_13_18395001 chr2R_18395001 RAL-109_125b 1718 chr2R 18405707 18405786 chr2R 18405838 18405916 10 128 7.5 4.5 6.0 1.4 209 chr2R 18405707 intergenic GstE6 +,GstE5 + chr2R 18405812 intergenic GstE6 +,GstE5 + chr2R 18405916 intergenic GstE6 + chr2R_10_18405001 chr2R_18405001 RAL-109_125b 1719 chr2R 18471903 18471928 chr2R 18472029 18472054 5 126 6.0 7.5 6.8 0.6 151 chr2R 18471903 intron CG30116 - chr2R 18471978 intron CG30116 - chr2R 18472054 intron CG30116 - chr2R_5_18470001 chr2R_18470001 RAL-109_125b 1720 chr2R 18480473 18480484 chr2R 18480630 18480641 8 157 0.0 0.0 0.0 8.0 168 chr2R 18480473 intron CG30116 - chr2R 18480557 intron CG30116 - chr2R 18480641 intron CG30116 - chr2R_8_18480001 chr2R_18480001 RAL-109_125b 1721 chr2R 18487790 18487827 chr2R 18495291 18495328 blood 10 7499 9.0 6.5 7.8 1.1 7538 chr2R 18487790 intron CG30116 - chr2R 18491559 intron CG30116 - chr2R 18495328 intron CG30116 - chr2R_10_18490001 chr2R_18490001 RAL-109_125b 1722 chr2R 18528146 18528214 chr2R 18528281 18528349 23 128 8.5 5.5 7.0 2.9 203 chr2R 18528146 intron CG10924 + chr2R 18528248 intron CG10924 + chr2R 18528349 intron CG10924 + chr2R_23_18525001 chr2R_18525001 RAL-109_125b 1723 chr2R 18575094 18575165 chr2R 18575367 18575432 17 262 2.5 5.0 3.8 3.5 338 chr2R 18575094 intron GEFmeso - chr2R 18575263 intron GEFmeso - chr2R 18575432 intron GEFmeso - chr2R_17_18575001 chr2R_18575001 RAL-109_125b 1724 chr2R 18575750 18575791 chr2R 18581986 18582029 3S18 10 6229 14.0 6.5 10.2 0.9 6279 chr2R 18575750 intron GEFmeso - chr2R 18578890 intron GEFmeso - chr2R 18582029 intron GEFmeso - chr2R_10_18575001 chr2R_18575001 RAL-109_125b 1725 chr2R 18575797 18575826 chr2R 18581984 18582048 3S18 26 6214 6.5 6.0 6.2 3.6 6251 chr2R 18575797 intron GEFmeso - chr2R 18578922 intron GEFmeso - chr2R 18582048 intron GEFmeso - chr2R_26_18575001 chr2R_18575001 RAL-109_125b 1726 chr2R 18590827 18590895 chr2R 18600029 18600089 roo 31 9194 9.5 7.5 8.5 3.3 9262 chr2R 18590827 intron GEFmeso - chr2R 18595458 intron GEFmeso - chr2R 18600089 intron GEFmeso - chr2R_31_18595001 chr2R_18595001 RAL-109_125b 1727 chr2R 18662315 18662342 chr2R 18662448 18662475 12 132 13.5 0.0 6.8 1.5 160 chr2R 18662315 intergenic not near genes chr2R 18662395 intergenic not near genes chr2R 18662475 intergenic not near genes chr2R_12_18660001 chr2R_18660001 RAL-109_125b 1728 chr2R 18675160 18675168 chr2R 18675288 18675296 5 128 1.0 15.5 8.2 0.5 136 chr2R 18675160 intergenic not near genes chr2R 18675228 intergenic not near genes chr2R 18675296 intergenic not near genes chr2R_5_18675001 chr2R_18675001 RAL-109_125b 1729 chr2R 18692851 18692918 chr2R 18692988 18693054 19 135 7.5 4.0 5.8 2.8 203 chr2R 18692851 exon Sik3 + chr2R 18692952 intron Sik3 + chr2R 18693054 intron Sik3 + chr2R_19_18690001 chr2R_18690001 RAL-109_125b 1730 chr2R 18769588 18769607 chr2R 18769745 18769757 12 156 20.5 12.5 16.5 0.7 169 chr2R 18769588 intron Mctp + chr2R 18769672 intron Mctp + chr2R 18769757 intron Mctp + chr2R_12_18765001 chr2R_18765001 RAL-109_125b 1731 chr2R 18778161 18778177 chr2R 18778301 18778317 11 140 13.5 9.0 11.2 0.9 156 chr2R 18778161 intergenic not near genes chr2R 18778239 intergenic not near genes chr2R 18778317 intergenic not near genes chr2R_11_18775001 chr2R_18775001 RAL-109_125b 1732 chr2R 18778562 18778599 chr2R 18778710 18778732 14 145 9.5 0.0 4.8 2.4 170 chr2R 18778562 intergenic not near genes chr2R 18778647 intergenic not near genes chr2R 18778732 intergenic not near genes chr2R_14_18775001 chr2R_18775001 RAL-109_125b 1733 chr2R 18808120 18808128 chr2R 18808246 18808250 4 125 21.5 1.0 11.2 0.3 130 chr2R 18808120 intergenic CG15096 - chr2R 18808185 intergenic CG15096 - chr2R 18808250 intergenic CG15096 - chr2R_4_18805001 chr2R_18805001 RAL-109_125b 1734 chr2R 18808129 18808173 chr2R 18808240 18808299 7 120 8.5 1.0 4.8 1.2 170 chr2R 18808129 intergenic CG15096 - chr2R 18808214 intergenic CG15096 - chr2R 18808299 intergenic CG15096 - chr2R_7_18805001 chr2R_18805001 RAL-109_125b 1735 chr2R 18926456 18926527 chr2R 18926592 18926644 18 134 6.0 0.0 3.0 4.5 188 chr2R 18926456 intron sano + chr2R 18926550 intron sano + chr2R 18926644 intron sano + chr2R_18_18925001 chr2R_18925001 RAL-109_125b 1736 chr2R 18929055 18929126 chr2R 18929183 18929254 24 127 6.0 2.5 4.2 4.6 199 chr2R 18929055 intron sano + chr2R 18929154 intron sano + chr2R 18929254 intron sano + chr2R_24_18925001 chr2R_18925001 RAL-109_125b 1737 chr2R 18984439 18984493 chr2R 18984733 18984802 24 308 6.5 10.5 8.5 2.5 363 chr2R 18984439 intergenic not near genes chr2R 18984620 intergenic not near genes chr2R 18984802 intergenic not near genes chr2R_24_18980001 chr2R_18980001 RAL-109_125b 1738 chr2R 18991981 18992050 chr2R 18992161 18992241 26 184 2.0 6.0 4.0 5.2 260 chr2R 18991981 intron tn + chr2R 18992111 intron tn + chr2R 18992241 intron tn + chr2R_26_18990001 chr2R_18990001 RAL-109_125b 1739 chr2R 19010698 19010762 chr2R 19010865 19010929 13 156 5.5 6.0 5.8 1.9 231 chr2R 19010698 intergenic not near genes chr2R 19010814 intergenic not near genes chr2R 19010929 intergenic not near genes chr2R_13_19010001 chr2R_19010001 RAL-109_125b 1740 chr2R 19025260 19025332 chr2R 19025543 19025605 10 277 0.5 5.5 3.0 2.5 345 chr2R 19025260 intron 5-HT1B - chr2R 19025432 intron 5-HT1B - chr2R 19025605 intron 5-HT1B - chr2R_10_19025001 chr2R_19025001 RAL-109_125b 1741 chr2R 19025997 19026061 chr2R 19026187 19026251 22 189 9.5 5.5 7.5 2.6 254 chr2R 19025997 exon 5-HT1B - chr2R 19026124 intron 5-HT1B - chr2R 19026251 intron 5-HT1B - chr2R_22_19025001 chr2R_19025001 RAL-109_125b 1742 chr2R 19042648 19042693 chr2R 19042782 19042827 8 128 15.0 11.5 13.2 0.6 179 chr2R 19042648 intergenic not near genes chr2R 19042738 intergenic not near genes chr2R 19042827 intergenic not near genes chr2R_8_19040001 chr2R_19040001 RAL-109_125b 1743 chr2R 19103360 19103428 chr2R 19103500 19103560 24 133 3.5 2.0 2.8 6.3 200 chr2R 19103360 intron 5-HT1A + chr2R 19103460 intron 5-HT1A + chr2R 19103560 intron 5-HT1A + chr2R_24_19100001 chr2R_19100001 RAL-109_125b 1744 chr2R 19104843 19104905 chr2R 19104998 19105060 20 154 6.5 3.5 5.0 3.3 217 chr2R 19104843 intron 5-HT1A + chr2R 19104952 intron 5-HT1A + chr2R 19105060 intron 5-HT1A + chr2R_20_19100001 chr2R_19100001 RAL-109_125b 1745 chr2R 19300918 19300984 chr2R 19301051 19301117 40 129 1.0 9.0 5.0 6.7 199 chr2R 19300918 intron Tab2 + chr2R 19301018 intron Tab2 + chr2R 19301117 intron Tab2 + chr2R_40_19300001 chr2R_19300001 RAL-109_125b 1746 chr2R 19313914 19313930 chr2R 19314121 19314137 4 207 17.5 9.0 13.2 0.3 223 chr2R 19313914 intron Rgk1 - chr2R 19314026 intron Rgk1 - chr2R 19314137 intron Rgk1 - chr2R_4_19310001 chr2R_19310001 RAL-109_125b 1747 chr2R 19313932 19313995 chr2R 19314119 19314163 15 198 6.5 7.5 7.0 1.9 231 chr2R 19313932 intron Rgk1 - chr2R 19314048 intron Rgk1 - chr2R 19314163 intron Rgk1 - chr2R_15_19310001 chr2R_19310001 RAL-109_125b 1748 chr2R 19536429 19536497 chr2R 19536555 19536618 25 130 6.0 7.0 6.5 3.3 189 chr2R 19536429 intron sm - chr2R 19536524 intron sm - chr2R 19536618 intron sm - chr2R_25_19535001 chr2R_19535001 RAL-109_125b 1749 chr2R 19618994 19619018 chr2R 19619186 19619220 11 200 9.5 13.0 11.2 0.9 226 chr2R 19618994 intron sm - chr2R 19619107 intron sm - chr2R 19619220 intron sm - chr2R_11_19615001 chr2R_19615001 RAL-109_125b 1750 chr2R 19699857 19699927 chr2R 19699992 19700062 21 133 5.5 5.0 5.2 3.4 205 chr2R 19699857 intergenic Obp56c - chr2R 19699960 intergenic Obp56c - chr2R 19700062 3` UTR Obp56c - chr2R_21_19695001 chr2R_19695001 RAL-109_125b 1751 chr2R 19715816 19715856 chr2R 19723335 19723355 blood 16 7515 14.0 11.5 12.8 1.2 7539 chr2R 19715816 intergenic not near genes chr2R 19719586 intergenic not near genes chr2R 19723355 intergenic not near genes chr2R_16_19715001 chr2R_19715001 RAL-109_125b 1752 chr2R 19776567 19776581 chr2R 19779940 19779954 jockey 7 3373 12.5 10.0 11.2 0.6 3387 chr2R 19776567 intergenic not near genes chr2R 19778260 intergenic not near genes chr2R 19779954 intergenic not near genes chr2R_7_19775001 chr2R_19775001 RAL-109_125b 1753 chr2R 19776585 19776614 chr2R 19779923 19779987 jockey 9 3368 8.5 8.0 8.2 1.0 3402 chr2R 19776585 intergenic not near genes chr2R 19778286 intergenic not near genes chr2R 19779987 intergenic not near genes chr2R_9_19775001 chr2R_19775001 RAL-109_125b 1754 chr2R 19914811 19914867 chr2R 19922273 19922329 mdg1 23 7461 3.0 9.5 6.2 3.2 7518 chr2R 19914811 intergenic not near genes chr2R 19918570 intergenic not near genes chr2R 19922329 intergenic not near genes chr2R_23_19915001 chr2R_19915001 RAL-109_125b 1755 chr2R 19943247 19943275 chr2R 19943382 19943400 11 134 0.0 7.5 3.8 2.3 153 chr2R 19943247 intergenic not near genes chr2R 19943324 intergenic not near genes chr2R 19943400 intergenic not near genes chr2R_11_19940001 chr2R_19940001 RAL-109_125b 1756 chr2R 19957384 19957419 chr2R 19962636 19962652 copia 10 5248 12.5 6.0 9.2 1.0 5268 chr2R 19957384 intergenic CG44623 + chr2R 19960018 intergenic not near genes chr2R 19962652 intergenic not near genes chr2R_10_19960001 chr2R_19960001 RAL-109_125b 1757 chr2R 19957421 19957460 chr2R 19962632 19962665 copia 11 5236 6.0 5.5 5.8 1.6 5244 chr2R 19957421 intergenic CG44623 + chr2R 19960043 intergenic not near genes chr2R 19962665 intergenic not near genes chr2R_11_19960001 chr2R_19960001 RAL-109_125b 1758 chr2R 20057952 20057969 chr2R 20058082 20058085 9 128 8.5 0.0 4.2 1.7 133 chr2R 20057952 intergenic CR44631 + chr2R 20058018 intergenic CR44631 + chr2R 20058085 intergenic CR44631 + chr2R_9_20055001 chr2R_20055001 RAL-109_125b 1759 chr2R 20069206 20069210 chr2R 20071892 20071898 opus 4 2688 0.0 12.0 6.0 0.6 2692 chr2R 20069206 intergenic not near genes chr2R 20070552 intergenic not near genes chr2R 20071898 intergenic not near genes chr2R_4_20070001 chr2R_20070001 RAL-109_125b 1760 chr2R 20069215 20069253 chr2R 20071876 20071935 opus 11 2683 0.0 5.5 2.8 2.9 2720 chr2R 20069215 intergenic not near genes chr2R 20070575 intergenic not near genes chr2R 20071935 intergenic not near genes chr2R_11_20070001 chr2R_20070001 RAL-109_125b 1761 chr2R 20185269 20185287 chr2R 20185402 20185420 7 133 5.0 5.5 5.2 1.1 151 chr2R 20185269 intergenic not near genes chr2R 20185344 intergenic not near genes chr2R 20185420 intergenic not near genes chr2R_7_20185001 chr2R_20185001 RAL-109_125b 1762 chr2R 20368488 20368496 chr2R 20377685 20377699 roo 4 9205 17.5 6.0 11.8 0.3 9211 chr2R 20368488 intergenic not near genes chr2R 20373094 intergenic not near genes chr2R 20377699 intergenic not near genes chr2R_4_20370001 chr2R_20370001 RAL-109_125b 1763 chr2R 20422524 20422566 chr2R 20422653 20422695 17 129 13.0 5.5 9.2 1.7 171 chr2R 20422524 intergenic not near genes chr2R 20422610 intergenic not near genes chr2R 20422695 intergenic not near genes chr2R_17_20420001 chr2R_20420001 RAL-109_125b 1764 chr2R 20506908 20506934 chr2R 20507040 20507066 7 132 0.0 1.5 0.8 3.9 158 chr2R 20506908 intergenic CR44645 + chr2R 20506987 intergenic CR44645 + chr2R 20507066 intergenic CR44645 + chr2R_7_20505001 chr2R_20505001 RAL-109_125b 1765 chr2R 20523004 20523033 chr2R 20523160 20523190 13 154 10.5 12.0 11.2 1.1 186 chr2R 20523004 intergenic not near genes chr2R 20523097 intergenic not near genes chr2R 20523190 intergenic not near genes chr2R_13_20520001 chr2R_20520001 RAL-109_125b 1766 chr2R 20523034 20523070 chr2R 20523149 20523203 16 134 4.5 9.0 6.8 2.1 169 chr2R 20523034 intergenic not near genes chr2R 20523118 intergenic not near genes chr2R 20523203 intergenic not near genes chr2R_16_20520001 chr2R_20520001 RAL-109_125b 1767 chr2R 20525859 20525937 chr2R 20526019 20526092 6 157 0.0 2.5 1.2 2.7 233 chr2R 20525859 intergenic CR44650 +,CG13422 + chr2R 20525976 intergenic CR44650 +,CG13422 + chr2R 20526092 intergenic CG13422 +,CR44650 + chr2R_6_20525001 chr2R_20525001 RAL-109_125b 1768 chr2R 20555282 20555336 chr2R 20555416 20555461 21 132 10.5 7.5 9.0 2.1 179 chr2R 20555282 intergenic not near genes chr2R 20555372 intergenic not near genes chr2R 20555461 intergenic not near genes chr2R_21_20555001 chr2R_20555001 RAL-109_125b 1769 chr2R 20571255 20571261 chr2R 20571402 20571409 4 148 22.0 0.0 11.0 0.3 154 chr2R 20571255 intron qsm - chr2R 20571332 intron qsm - chr2R 20571409 intron qsm - chr2R_4_20570001 chr2R_20570001 RAL-109_125b 1770 chr2R 20590625 20590667 chr2R 20590754 20590796 15 128 7.0 10.0 8.5 1.6 171 chr2R 20590625 intron bl + chr2R 20590710 intron bl + chr2R 20590796 intron bl + chr2R_15_20590001 chr2R_20590001 RAL-109_125b 1771 chr2R 20598979 20599027 chr2R 20599970 20600018 21 988 6.5 8.5 7.5 2.5 1039 chr2R 20598979 intron bl + chr2R 20599498 intron bl + chr2R 20600018 intron bl + chr2R_21_20595001 chr2R_20595001 RAL-109_125b 1772 chr2R 20667323 20667339 chr2R 20667485 20667499 4 160 22.5 23.5 23.0 0.2 176 chr2R 20667323 intergenic Fem-1 -,exu - chr2R 20667411 intergenic exu -,Fem-1 - chr2R 20667499 3` UTR exu - chr2R_4_20665001 chr2R_20665001 RAL-109_125b 1773 chr2R 20690720 20690780 chr2R 20690842 20690884 16 116 6.0 10.0 8.0 1.8 164 chr2R 20690720 intergenic not near genes chr2R 20690802 intergenic not near genes chr2R 20690884 intergenic not near genes chr2R_16_20690001 chr2R_20690001 RAL-109_125b 1774 chr2R 20739396 20739444 chr2R 20744214 20744262 F-element 14 4809 12.5 4.0 8.2 1.5 4866 chr2R 20739396 intron dpr + chr2R 20741829 intron dpr + chr2R 20744262 intron dpr + chr2R_14_20740001 chr2R_20740001 RAL-109_125b 1775 chr2R 20739447 20739467 chr2R 20744210 20744270 F-element 6 4806 10.0 3.5 6.8 0.8 4823 chr2R 20739447 intron dpr + chr2R 20741858 intron dpr + chr2R 20744270 intron dpr + chr2R_6_20740001 chr2R_20740001 RAL-109_125b 1776 chr2R 20753697 20753772 chr2R 20753829 20753908 11 137 4.5 2.5 3.5 2.4 211 chr2R 20753697 3` UTR CG34202 + chr2R 20753802 intergenic CG34202 + chr2R 20753908 intergenic CG34202 + chr2R_11_20750001 chr2R_20750001 RAL-109_125b 1777 chr2R 20760780 20760798 chr2R 20761105 20761123 8 324 11.5 0.0 5.8 1.2 343 chr2R 20760780 intergenic not near genes chr2R 20760952 intergenic not near genes chr2R 20761123 intergenic not near genes chr2R_8_20760001 chr2R_20760001 RAL-109_125b 1778 chr2R 20783265 20783309 chr2R 20788087 20788131 F-element 14 4821 11.5 7.5 9.5 1.3 4866 chr2R 20783265 intergenic not near genes chr2R 20785698 intergenic not near genes chr2R 20788131 intergenic CG43666 - chr2R_14_20785001 chr2R_20785001 RAL-109_125b 1779 chr2R 20817497 20817517 chr2R 20818031 20818072 6 550 16.0 3.0 9.5 0.6 575 chr2R 20817497 intergenic not near genes chr2R 20817784 intergenic not near genes chr2R 20818072 intergenic not near genes chr2R_6_20815001 chr2R_20815001 RAL-109_125b 1780 chr2R 20863068 20863140 chr2R 20863204 20863276 18 131 5.5 7.5 6.5 2.4 208 chr2R 20863068 intergenic not near genes chr2R 20863172 intergenic not near genes chr2R 20863276 intergenic not near genes chr2R_18_20860001 chr2R_20860001 RAL-109_125b 1781 chr2R 20953245 20953289 chr2R 20953382 20953426 16 135 9.5 11.5 10.5 1.4 181 chr2R 20953245 intergenic not near genes chr2R 20953336 intergenic not near genes chr2R 20953426 intergenic not near genes chr2R_16_20950001 chr2R_20950001 RAL-109_125b 1782 chr2R 20962861 20962874 chr2R 20963009 20963022 5 148 20.0 6.0 13.0 0.4 161 chr2R 20962861 intergenic not near genes chr2R 20962942 intergenic not near genes chr2R 20963022 intergenic not near genes chr2R_5_20960001 chr2R_20960001 RAL-109_125b 1783 chr2R 20962875 20962935 chr2R 20963008 20963083 21 145 8.5 6.0 7.2 2.6 208 chr2R 20962875 intergenic not near genes chr2R 20962979 intergenic not near genes chr2R 20963083 intergenic not near genes chr2R_21_20960001 chr2R_20960001 RAL-109_125b 1784 chr2R 20966977 20967057 chr2R 20967104 20967184 17 126 9.0 2.0 5.5 2.6 207 chr2R 20966977 intergenic not near genes chr2R 20967080 intergenic not near genes chr2R 20967184 intergenic not near genes chr2R_17_20965001 chr2R_20965001 RAL-109_125b 1785 chr2R 21040814 21040890 chr2R 21040940 21041000 9 123 2.5 5.5 4.0 1.8 186 chr2R 21040814 intergenic not near genes chr2R 21040907 intergenic not near genes chr2R 21041000 intergenic not near genes chr2R_9_21040001 chr2R_21040001 RAL-109_125b 1786 chr2R 21080259 21080278 chr2R 21080387 21080406 8 127 12.5 3.0 7.8 0.9 147 chr2R 21080259 intron Treh + chr2R 21080332 intron Treh + chr2R 21080406 intron Treh + chr2R_8_21080001 chr2R_21080001 RAL-109_125b 1787 chr2R 21117425 21117494 chr2R 21117831 21117903 12 408 6.0 5.0 5.5 1.8 478 chr2R 21117425 intron ktub + chr2R 21117664 intron ktub + chr2R 21117903 intron ktub + chr2R_12_21115001 chr2R_21115001 RAL-109_125b 1788 chr2R 21151108 21151144 chr2R 21153763 21153827 opus 13 2679 0.0 8.5 4.2 2.5 2719 chr2R 21151108 intron CG30389 - chr2R 21152468 intron CG30389 - chr2R 21153827 intron CG30389 - chr2R_13_21150001 chr2R_21150001 RAL-109_125b 1789 chr2R 21217273 21217282 chr2R 21217410 21217419 7 137 15.0 0.0 7.5 0.8 146 chr2R 21217273 exon CG15661 - chr2R 21217346 5` UTR CG15661 - chr2R 21217419 5` UTR CG15661 - chr2R_7_21215001 chr2R_21215001 RAL-109_125b 1790 chr2R 21258453 21258466 chr2R 21258580 21258594 4 128 0.0 15.0 7.5 0.5 141 chr2R 21258453 intron Rgk3 + chr2R 21258524 intron Rgk3 + chr2R 21258594 intron Rgk3 + chr2R_4_21255001 chr2R_21255001 RAL-109_125b 1791 chr2R 21259620 21259639 chr2R 21259749 21259766 6 128 13.0 13.0 13.0 0.4 146 chr2R 21259620 intron Rgk3 + chr2R 21259693 intron Rgk3 + chr2R 21259766 intron Rgk3 + chr2R_6_21255001 chr2R_21255001 RAL-109_125b 1792 chr2R 21259646 21259664 chr2R 21259744 21259778 4 114 8.5 12.0 10.2 0.4 132 chr2R 21259646 intron Rgk3 + chr2R 21259712 intron Rgk3 + chr2R 21259778 intron Rgk3 + chr2R_4_21255001 chr2R_21255001 RAL-109_125b 1793 chr2R 21285384 21285436 chr2R 21285511 21285563 28 125 17.0 13.0 15.0 1.8 179 chr2R 21285384 3` UTR,3` UTR MFS16 +,CG10505 - chr2R 21285474 3` UTR,3` UTR MFS16 +,CG10505 - chr2R 21285563 3` UTR,3` UTR MFS16 +,CG10505 - chr2R_28_21285001 chr2R_21285001 RAL-109_125b 1794 chr2R 21352519 21352530 chr2R 21352680 21352691 5 161 17.0 3.0 10.0 0.5 172 chr2R 21352519 intergenic not near genes chr2R 21352605 intergenic not near genes chr2R 21352691 intergenic not near genes chr2R_5_21350001 chr2R_21350001 RAL-109_125b 1795 chr2R 21365776 21365799 chr2R 21365912 21365935 4 136 2.0 0.0 1.0 2.0 159 chr2R 21365776 intron cv-2 - chr2R 21365856 intron cv-2 - chr2R 21365935 intron cv-2 - chr2R_4_21365001 chr2R_21365001 RAL-109_125b 1796 chr2R 21366488 21366545 chr2R 21366630 21366700 18 151 2.5 6.5 4.5 3.3 212 chr2R 21366488 intron cv-2 - chr2R 21366594 intron cv-2 - chr2R 21366700 exon cv-2 - chr2R_18_21365001 chr2R_21365001 RAL-109_125b 1797 chr2R 21449241 21449309 chr2R 21449387 21449452 23 140 9.5 7.5 8.5 2.4 211 chr2R 21449241 intron Sdc - chr2R 21449346 intron Sdc - chr2R 21449452 intron Sdc - chr2R_23_21445001 chr2R_21445001 RAL-109_125b 1798 chr2R 21469897 21469972 chr2R 21470028 21470095 21 125 4.5 10.0 7.2 2.6 198 chr2R 21469897 intron Sdc - chr2R 21469996 intron Sdc - chr2R 21470095 intron Sdc - chr2R_21_21465001 chr2R_21465001 RAL-109_125b 1799 chr2R 21481163 21481237 chr2R 21481364 21481433 26 199 9.5 7.0 8.2 2.8 270 chr2R 21481163 5` UTR Sdc - chr2R 21481298 intergenic Sdc - chr2R 21481433 intergenic Sdc -,Sara + chr2R_26_21480001 chr2R_21480001 RAL-109_125b 1800 chr2R 21505717 21505792 chr2R 21505846 21505923 44 129 9.0 5.0 7.0 5.5 206 chr2R 21505717 intron MESK2 + chr2R 21505820 intron MESK2 + chr2R 21505923 intron MESK2 + chr2R_44_21505001 chr2R_21505001 RAL-109_125b 1801 chr2R 21512162 21512173 chr2R 21512286 21512300 7 126 10.5 15.5 13.0 0.5 138 chr2R 21512162 exon MESK2 + chr2R 21512231 intron MESK2 + chr2R 21512300 intron MESK2 + chr2R_7_21510001 chr2R_21510001 RAL-109_125b 1802 chr2R 21532844 21532880 chr2R 21532972 21533008 15 128 5.0 9.5 7.2 1.8 164 chr2R 21532844 intron Egfr + chr2R 21532926 intron Egfr + chr2R 21533008 intron Egfr + chr2R_15_21530001 chr2R_21530001 RAL-109_125b 1803 chr2R 21592807 21592857 chr2R 21592930 21592952 12 122 10.5 12.0 11.2 1.0 145 chr2R 21592807 intergenic not near genes chr2R 21592880 intergenic not near genes chr2R 21592952 intergenic not near genes chr2R_12_21590001 chr2R_21590001 RAL-109_125b 1804 chr2R 21643912 21643953 chr2R 21644043 21644084 17 131 6.0 16.0 11.0 1.4 172 chr2R 21643912 intergenic not near genes chr2R 21643998 intergenic not near genes chr2R 21644084 intergenic not near genes chr2R_17_21640001 chr2R_21640001 RAL-109_125b 1805 chr2R 21659636 21659687 chr2R 21659901 21659952 9 272 40.0 22.5 31.2 0.3 316 chr2R 21659636 exon Rae1 - chr2R 21659794 exon Rae1 - chr2R 21659952 5` UTR Rae1 - chr2R_9_21655001 chr2R_21655001 RAL-109_125b 1806 chr2R 21700124 21700179 chr2R 21700247 21700315 22 132 9.5 10.0 9.8 2.0 191 chr2R 21700124 intron HmgZ - chr2R 21700220 intron HmgZ - chr2R 21700315 intron HmgZ - chr2R_22_21700001 chr2R_21700001 RAL-109_125b 1807 chr2R 21709116 21709189 chr2R 21709307 21709393 17 195 7.0 5.5 6.2 2.4 277 chr2R 21709116 intron,3` UTR HmgD +,CR44749 - chr2R 21709254 intron,3` UTR HmgD +,CR44749 - chr2R 21709393 intron,intron HmgD +,CR44749 - chr2R_17_21705001 chr2R_21705001 RAL-109_125b 1808 chr2R 21721546 21721611 chr2R 21721665 21721748 14 132 6.5 0.0 3.2 3.3 202 chr2R 21721546 intron LBR + chr2R 21721647 intron LBR + chr2R 21721748 intron LBR + chr2R_14_21720001 chr2R_21720001 RAL-109_125b 1809 chr2R 21726652 21726716 chr2R 21726800 21726870 12 153 7.0 0.0 3.5 2.7 218 chr2R 21726652 intergenic not near genes chr2R 21726761 intergenic not near genes chr2R 21726870 intergenic not near genes chr2R_12_21725001 chr2R_21725001 RAL-109_125b 1810 chr2R 21738254 21738308 chr2R 21747438 21747483 roo 20 9188 3.5 9.5 6.5 2.7 9229 chr2R 21738254 intergenic not near genes chr2R 21742868 intergenic not near genes chr2R 21747483 intergenic not near genes chr2R_20_21740001 chr2R_21740001 RAL-109_125b 1811 chr2R 21753042 21753110 chr2R 21753577 21753645 roo 30 532 5.5 8.0 6.8 3.8 603 chr2R 21753042 intergenic not near genes chr2R 21753344 intergenic not near genes chr2R 21753645 intergenic not near genes chr2R_30_21750001 chr2R_21750001 RAL-109_125b 1812 chr2R 21802379 21802447 chr2R 21802520 21802588 7 141 8.0 4.5 6.2 1.0 209 chr2R 21802379 intergenic not near genes chr2R 21802484 intergenic not near genes chr2R 21802588 intergenic not near genes chr2R_7_21800001 chr2R_21800001 RAL-109_125b 1813 chr2R 21809507 21809555 chr2R 21817769 21817820 roo 18 8286 7.5 8.0 7.8 2.0 8313 chr2R 21809507 intergenic not near genes chr2R 21813664 intergenic not near genes chr2R 21817820 intergenic not near genes chr2R_18_21810001 chr2R_21810001 RAL-109_125b 1814 chr2R 21857296 21857314 chr2R 21857437 21857455 5 141 13.0 7.5 10.2 0.4 159 chr2R 21857296 intergenic not near genes chr2R 21857376 intergenic not near genes chr2R 21857455 intergenic not near genes chr2R_5_21855001 chr2R_21855001 RAL-109_125b 1815 chr2R 21857317 21857367 chr2R 21857436 21857508 21 134 9.0 7.5 8.2 2.3 191 chr2R 21857317 intergenic not near genes chr2R 21857412 intergenic not near genes chr2R 21857508 intergenic not near genes chr2R_21_21855001 chr2R_21855001 RAL-109_125b 1816 chr2R 21860852 21860878 chr2R 21860979 21861005 7 125 13.5 9.5 11.5 0.6 153 chr2R 21860852 exon CG9294 + chr2R 21860928 exon CG9294 + chr2R 21861005 exon CG9294 + chr2R_7_21860001 chr2R_21860001 RAL-109_125b 1817 chr2R 21894834 21894916 chr2R 21894962 21895020 12 112 6.5 0.5 3.5 2.7 186 chr2R 21894834 intron Fili + chr2R 21894927 intron Fili + chr2R 21895020 intron Fili + chr2R_12_21890001 chr2R_21890001 RAL-109_125b 1818 chr2R 21906225 21906301 chr2R 21906376 21906452 21 151 4.0 3.0 3.5 4.7 227 chr2R 21906225 intron Fili + chr2R 21906338 intron Fili + chr2R 21906452 intron Fili + chr2R_21_21905001 chr2R_21905001 RAL-109_125b 1819 chr2R 21914305 21914327 chr2R 21914442 21914464 15 135 2.5 5.5 4.0 3.0 159 chr2R 21914305 intron Fili + chr2R 21914384 intron Fili + chr2R 21914464 intron Fili + chr2R_15_21910001 chr2R_21910001 RAL-109_125b 1820 chr2R 21919839 21919896 chr2R 21919977 21920034 17 134 6.0 6.5 6.2 2.4 195 chr2R 21919839 intron Fili + chr2R 21919936 intron Fili + chr2R 21920034 intron Fili + chr2R_17_21915001 chr2R_21915001 RAL-109_125b 1821 chr2R 21991187 21991246 chr2R 21991305 21991368 14 110 4.0 4.5 4.2 2.7 181 chr2R 21991187 intron CG34370 - chr2R 21991278 intron CG34370 - chr2R 21991368 intron CG34370 - chr2R_14_21990001 chr2R_21990001 RAL-109_125b 1822 chr2R 22009737 22009792 chr2R 22009863 22009918 14 126 8.5 4.5 6.5 1.9 181 chr2R 22009737 intron CG34370 - chr2R 22009828 intron CG34370 - chr2R 22009918 intron CG34370 - chr2R_14_22005001 chr2R_22005001 RAL-109_125b 1823 chr2R 22029488 22029531 chr2R 22029616 22029659 14 128 7.5 1.0 4.2 2.7 171 chr2R 22029488 intron CG34370 - chr2R 22029574 intron CG34370 - chr2R 22029659 intron CG34370 - chr2R_14_22025001 chr2R_22025001 RAL-109_125b 1824 chr2R 22053695 22053750 chr2R 22053885 22053940 13 190 0.0 3.5 1.8 4.6 245 chr2R 22053695 intergenic not near genes chr2R 22053818 intergenic not near genes chr2R 22053940 intergenic not near genes chr2R_13_22050001 chr2R_22050001 RAL-109_125b 1825 chr2R 22072634 22072699 chr2R 22072769 22072809 14 133 6.5 6.5 6.5 1.9 175 chr2R 22072634 intron CG11474 - chr2R 22072722 intron CG11474 - chr2R 22072809 exon CG11474 - chr2R_14_22070001 chr2R_22070001 RAL-109_125b 1826 chr2R 22099825 22099876 chr2R 22099956 22100007 8 126 7.5 6.5 7.0 1.0 182 chr2R 22099825 intergenic CG11073 - chr2R 22099916 intergenic CG11073 - chr2R 22100007 intergenic CG11073 - chr2R_8_22095001 chr2R_22095001 RAL-109_125b 1827 chr2R 22107319 22107329 chr2R 22107455 22107465 7 136 6.5 13.0 9.8 0.6 146 chr2R 22107319 intron Vrp1 - chr2R 22107392 intron Vrp1 - chr2R 22107465 intron Vrp1 - chr2R_7_22105001 chr2R_22105001 RAL-109_125b 1828 chr2R 22185635 22185704 chr2R 22185784 22185853 9 148 5.5 0.0 2.8 2.4 218 chr2R 22185635 exon MED16 + chr2R 22185744 3` UTR MED16 + chr2R 22185853 3` UTR MED16 + chr2R_9_22185001 chr2R_22185001 RAL-109_125b 1829 chr2R 22200737 22200767 chr2R 22200893 22200915 11 154 2.0 11.0 6.5 1.5 178 chr2R 22200737 intron Swim - chr2R 22200826 intron Swim - chr2R 22200915 intron Swim - chr2R_11_22200001 chr2R_22200001 RAL-109_125b 1830 chr2R 22200768 22200804 chr2R 22200888 22200960 20 149 1.5 10.0 5.8 2.9 192 chr2R 22200768 intron Swim - chr2R 22200864 intron Swim - chr2R 22200960 intron Swim - chr2R_20_22200001 chr2R_22200001 RAL-109_125b 1831 chr2R 22280070 22280120 chr2R 22280191 22280245 13 128 8.5 6.0 7.2 1.6 175 chr2R 22280070 intron dve + chr2R 22280158 intron dve + chr2R 22280245 intron dve + chr2R_13_22280001 chr2R_22280001 RAL-109_125b 1832 chr2R 22290033 22290076 chr2R 22290167 22290183 9 129 11.0 5.0 8.0 1.0 150 chr2R 22290033 intergenic not near genes chr2R 22290108 intergenic not near genes chr2R 22290183 intergenic not near genes chr2R_9_22290001 chr2R_22290001 RAL-109_125b 1833 chr2R 4825123 4825123 chr2R 22311213 22311217 5 17486093 32.0 18.5 25.2 0.2 17486094 chr2R 4825123 intergenic not near genes chr2R 13568170 intergenic not near genes chr2R 22311217 intron wdp - chr2R_5_13565001 chr2R_13565001 RAL-109_125b 1834 chr2R 22312733 22312802 chr2R 22312903 22312978 41 172 6.5 5.0 5.8 6.0 245 chr2R 22312733 intergenic CR44758 + chr2R 22312856 intergenic CR44758 + chr2R 22312978 intron CR44758 + chr2R_41_22310001 chr2R_22310001 RAL-109_125b 1835 chr2R 22349651 22349659 chr2R 22351485 22351493 jockey 5 1834 23.0 9.0 16.0 0.3 1842 chr2R 22349651 intron Liprin-gamma - chr2R 22350572 intron Liprin-gamma - chr2R 22351493 intron Liprin-gamma - chr2R_5_22350001 chr2R_22350001 RAL-109_125b 1836 chr2R 22349660 22349708 chr2R 22351484 22351542 jockey 17 1830 14.5 9.0 11.8 1.3 1882 chr2R 22349660 intron Liprin-gamma - chr2R 22350601 intron Liprin-gamma - chr2R 22351542 intron Liprin-gamma - chr2R_17_22350001 chr2R_22350001 RAL-109_125b 1837 chr2R 22360341 22360350 chr2R 22360824 22360830 jockey 4 481 17.5 5.5 11.5 0.3 489 chr2R 22360341 intron Liprin-gamma - chr2R 22360586 intron Liprin-gamma - chr2R 22360830 intron Liprin-gamma - chr2R_4_22360001 chr2R_22360001 RAL-109_125b 1838 chr2R 22370731 22370771 chr2R 22370852 22370903 5 130 4.0 4.5 4.2 1.0 172 chr2R 22370731 intron Liprin-gamma - chr2R 22370817 intron Liprin-gamma - chr2R 22370903 intron Liprin-gamma - chr2R_5_22370001 chr2R_22370001 RAL-109_125b 1839 chr2R 22420599 22420659 chr2R 22420734 22420794 7 135 0.5 2.0 1.2 3.2 195 chr2R 22420599 intergenic mRpS29 -,rad50 + chr2R 22420696 intergenic rad50 +,mRpS29 - chr2R 22420794 intergenic rad50 +,mRpS29 - chr2R_7_22420001 chr2R_22420001 RAL-109_125b 1840 chr2R 22427008 22427062 chr2R 22427137 22427209 14 141 9.0 9.0 9.0 1.4 201 chr2R 22427008 intergenic CG10344 -,ppk12 + chr2R 22427108 intergenic CG10344 -,ppk12 + chr2R 22427209 intergenic CG10344 -,ppk12 + chr2R_14_22425001 chr2R_22425001 RAL-109_125b 1841 chr2R 22460345 22460376 chr2R 22460474 22460505 13 127 13.0 13.5 13.2 0.9 160 chr2R 22460345 intron CG10384 + chr2R 22460425 intron CG10384 + chr2R 22460505 intron CG10384 + chr2R_13_22460001 chr2R_22460001 RAL-109_125b 1842 chr2R 22460379 22460401 chr2R 22460465 22460530 16 122 9.0 12.5 10.8 1.4 151 chr2R 22460379 intron CG10384 + chr2R 22460454 intron CG10384 + chr2R 22460530 intron CG10384 + chr2R_16_22460001 chr2R_22460001 RAL-109_125b 1843 chr2R 22465280 22465302 chr2R 22465529 22465551 BS 13 248 16.0 7.5 11.8 1.0 271 chr2R 22465280 intron CG10384 + chr2R 22465416 intron CG10384 + chr2R 22465551 intron CG10384 + chr2R_13_22465001 chr2R_22465001 RAL-109_125b 1844 chr2R 22465303 22465337 chr2R 22465525 22465586 BS 13 247 10.0 7.0 8.5 1.4 283 chr2R 22465303 intron CG10384 + chr2R 22465444 intron CG10384 + chr2R 22465586 intron CG10384 + chr2R_13_22465001 chr2R_22465001 RAL-109_125b 1845 chr2R 22499798 22499880 chr2R 22499928 22499967 9 119 0.5 8.0 4.2 1.7 169 chr2R 22499798 intron px - chr2R 22499882 intron px - chr2R 22499967 intron px - chr2R_9_22495001 chr2R_22495001 RAL-109_125b 1846 chr2R 22503854 22503891 chr2R 22503999 22504016 14 141 2.5 7.5 5.0 2.3 162 chr2R 22503854 intron px - chr2R 22503935 intron px - chr2R 22504016 intron px - chr2R_14_22500001 chr2R_22500001 RAL-109_125b 1847 chr2R 22563076 22563108 chr2R 22563207 22563229 10 129 14.5 15.0 14.8 0.6 153 chr2R 22563076 3` UTR CG11362 + chr2R 22563152 3` UTR dnr1 - chr2R 22563229 3` UTR dnr1 - chr2R_10_22560001 chr2R_22560001 RAL-109_125b 1848 chr2R 22580417 22580442 chr2R 22586617 22586642 diver 5 6197 0.5 10.0 5.2 0.8 6225 chr2R 22580417 intron dnr1 - chr2R 22583530 intron dnr1 - chr2R 22586642 intron dnr1 - chr2R_5_22580001 chr2R_22580001 RAL-109_125b 1849 chr2R 22588112 22588139 chr2R 22588252 22588280 6 136 16.5 16.0 16.2 0.3 168 chr2R 22588112 intron dnr1 - chr2R 22588196 intron dnr1 - chr2R 22588280 intron dnr1 - chr2R_6_22585001 chr2R_22585001 RAL-109_125b 1850 chr2R 22588140 22588155 chr2R 22588245 22588275 7 127 13.5 13.0 13.2 0.5 135 chr2R 22588140 intron dnr1 - chr2R 22588208 intron dnr1 - chr2R 22588275 intron dnr1 - chr2R_7_22585001 chr2R_22585001 RAL-109_125b 1851 chr2R 22620778 22620852 chr2R 22620928 22620962 27 146 5.5 4.0 4.8 4.7 184 chr2R 22620778 5` UTR CG33143 + chr2R 22620870 5` UTR CG33143 + chr2R 22620962 5` UTR CG33143 + chr2R_27_22620001 chr2R_22620001 RAL-109_125b 1852 chr2R 22623761 22623821 chr2R 22623906 22623966 17 144 10.0 9.0 9.5 1.6 205 chr2R 22623761 intron CG33143 + chr2R 22623864 intron CG33143 + chr2R 22623966 intron CG33143 + chr2R_17_22620001 chr2R_22620001 RAL-109_125b 1853 chr2R 22659454 22659527 chr2R 22659582 22659655 38 123 6.5 4.0 5.2 6.1 201 chr2R 22659454 3` UTR,5` UTR,5` UTR CG13510 +,CG13511 +,CG42565 + chr2R 22659554 3` UTR,5` UTR,5` UTR CG13510 +,CG13511 +,CG42565 + chr2R 22659655 3` UTR,5` UTR,5` UTR CG13510 +,CG13511 +,CG42565 + chr2R_38_22655001 chr2R_22655001 RAL-109_125b 1854 chr2R 22662221 22662268 chr2R 22662365 22662419 18 145 10.5 7.5 9.0 1.8 198 chr2R 22662221 intron CG42566 + chr2R 22662320 intron CG42566 + chr2R 22662419 intron CG42566 + chr2R_18_22660001 chr2R_22660001 RAL-109_125b 1855 chr2R 22777944 22777986 chr2R 22778106 22778148 10 162 8.5 3.5 6.0 1.4 204 chr2R 22777944 intron CG42260 - chr2R 22778046 intron CG42260 - chr2R 22778148 intron CG42260 - chr2R_10_22775001 chr2R_22775001 RAL-109_125b 1856 chr2R 22787550 22787591 chr2R 22787733 22787774 20 182 4.0 5.5 4.8 3.4 224 chr2R 22787550 intron CG42260 - chr2R 22787662 intron CG42260 - chr2R 22787774 intron CG42260 - chr2R_20_22785001 chr2R_22785001 RAL-109_125b 1857 chr2R 22834759 22834772 chr2R 22834912 22834935 8 158 0.0 5.0 2.5 2.3 176 chr2R 22834759 intron CG12490 + chr2R 22834847 intron CG12490 + chr2R 22834935 intron CG12490 + chr2R_8_22830001 chr2R_22830001 RAL-109_125b 1858 chr2R 22834309 22834313 chr2R 22836301 22836312 5 1992 47.0 6.0 26.5 0.2 2003 chr2R 22834309 exon CG30265 + chr2R 22835310 exon CG12490 + chr2R 22836312 intron CG12490 + chr2R_5_22835001 chr2R_22835001 RAL-109_125b 1859 chr2R 22839448 22839463 chr2R 22839577 22839592 9 129 13.0 1.5 7.2 1.1 144 chr2R 22839448 intergenic CG9825 + chr2R 22839520 intergenic CG9825 + chr2R 22839592 intergenic CG9825 + chr2R_9_22835001 chr2R_22835001 RAL-109_125b 1860 chr2R 22839474 22839523 chr2R 22839571 22839657 7 129 8.0 2.0 5.0 1.2 183 chr2R 22839474 intergenic CG9825 + chr2R 22839566 intergenic CG9825 + chr2R 22839657 intergenic CG9825 + chr2R_7_22835001 chr2R_22835001 RAL-109_125b 1861 chr2R 22843007 22843051 chr2R 22845019 22845063 flea 12 2012 7.0 7.5 7.2 1.5 2056 chr2R 22843007 intergenic CG9826 + chr2R 22844035 intergenic not near genes chr2R 22845063 intergenic not near genes chr2R_12_22840001 chr2R_22840001 RAL-109_125b 1862 chr2R 22945014 22945084 chr2R 22945178 22945247 24 161 7.5 8.0 7.8 2.7 233 chr2R 22945014 exon CG42694 + chr2R 22945130 3` UTR CG42694 + chr2R 22945247 intergenic CG42694 + chr2R_24_22945001 chr2R_22945001 RAL-109_125b 1863 chr2R 22953342 22953380 chr2R 22953486 22953524 6 144 6.5 4.0 5.2 1.0 182 chr2R 22953342 intron CR32835 - chr2R 22953433 3` UTR CR32835 - chr2R 22953524 3` UTR CR32835 - chr2R_6_22950001 chr2R_22950001 RAL-109_125b 1864 chr2R 22957002 22957061 chr2R 22957131 22957190 27 128 8.0 9.0 8.5 2.8 188 chr2R 22957002 intergenic CR44780 - chr2R 22957096 intergenic CR44780 - chr2R 22957190 3` UTR CR44780 - chr2R_27_22955001 chr2R_22955001 RAL-109_125b 1865 chr2R 22957698 22957766 chr2R 22957830 22957903 28 133 5.5 8.5 7.0 3.5 205 chr2R 22957698 intergenic CR44780 - chr2R 22957800 intergenic CR44780 - chr2R 22957903 intergenic not near genes chr2R_28_22955001 chr2R_22955001 RAL-109_125b 1866 chr2R 22971470 22971518 chr2R 22971582 22971647 19 119 0.5 7.5 4.0 3.8 177 chr2R 22971470 intergenic not near genes chr2R 22971558 intergenic not near genes chr2R 22971647 intergenic not near genes chr2R_19_22970001 chr2R_22970001 RAL-109_125b 1867 chr2R 23061722 23061790 chr2R 23061866 23061933 33 140 3.5 7.0 5.2 5.3 211 chr2R 23061722 3` UTR l(2)06496 - chr2R 23061828 3` UTR l(2)06496 - chr2R 23061933 exon l(2)06496 - chr2R_33_23060001 chr2R_23060001 RAL-109_125b 1868 chr2R 23158301 23158311 chr2R 23158428 23158428 4 124 18.5 11.0 14.8 0.3 127 chr2R 23158301 intron CG9899 + chr2R 23158364 intron CG9899 + chr2R 23158428 intron CG9899 + chr2R_4_23155001 chr2R_23155001 RAL-109_125b 1869 chr2R 23158314 23158354 chr2R 23158424 23158481 26 121 13.0 11.5 12.2 2.0 167 chr2R 23158314 intron CG9899 + chr2R 23158398 intron CG9899 + chr2R 23158481 intron CG9899 + chr2R_26_23155001 chr2R_23155001 RAL-109_125b 1870 chr2R 23207828 23207853 chr2R 23207939 23207981 9 116 12.0 6.0 9.0 0.9 153 chr2R 23207828 intergenic not near genes chr2R 23207904 intergenic not near genes chr2R 23207981 intergenic not near genes chr2R_9_23205001 chr2R_23205001 RAL-109_125b 1871 chr2R 23218956 23219022 chr2R 23219245 23219309 10 285 6.0 0.5 3.2 2.4 353 chr2R 23218956 intergenic not near genes chr2R 23219132 intergenic not near genes chr2R 23219309 intergenic not near genes chr2R_10_23215001 chr2R_23215001 RAL-109_125b 1872 chr2R 23236829 23236853 chr2R 23236973 23236997 8 144 2.5 10.5 6.5 1.1 168 chr2R 23236829 intergenic not near genes chr2R 23236913 intergenic not near genes chr2R 23236997 intergenic not near genes chr2R_8_23235001 chr2R_23235001 RAL-109_125b 1873 chr2R 23291281 23291317 chr2R 23291409 23291445 12 128 9.5 0.0 4.8 2.1 164 chr2R 23291281 3` UTR CR44783 - chr2R 23291363 3` UTR CR44783 - chr2R 23291445 intergenic CR44783 - chr2R_12_23290001 chr2R_23290001 RAL-109_125b 1874 chr2R 23306807 23306822 chr2R 23306924 23306924 5 121 8.5 13.5 11.0 0.4 117 chr2R 23306807 intergenic not near genes chr2R 23306866 intergenic not near genes chr2R 23306924 intergenic not near genes chr2R_5_23305001 chr2R_23305001 RAL-109_125b 1875 chr2R 23343353 23343422 chr2R 23343733 23343802 22 379 5.5 7.5 6.5 2.9 449 chr2R 23343353 intergenic CG3502 - chr2R 23343578 exon CG3502 - chr2R 23343802 exon CG3502 - chr2R_22_23340001 chr2R_23340001 RAL-109_125b 1876 chr2R 23402586 23402602 chr2R 23407683 23407699 flea 5 5097 3.0 7.5 5.2 0.8 5113 chr2R 23402586 intergenic CG3520 - chr2R 23405142 intergenic not near genes chr2R 23407699 intergenic not near genes chr2R_5_23405001 chr2R_23405001 RAL-109_125b 1877 chr2R 23437188 23437195 chr2R 23437314 23437322 4 126 20.0 8.5 14.2 0.3 134 chr2R 23437188 intergenic not near genes chr2R 23437255 intergenic not near genes chr2R 23437322 intergenic not near genes chr2R_4_23435001 chr2R_23435001 RAL-109_125b 1878 chr2R 23437197 23437236 chr2R 23437310 23437332 14 112 9.5 8.0 8.8 1.4 135 chr2R 23437197 intergenic not near genes chr2R 23437264 intergenic not near genes chr2R 23437332 intergenic not near genes chr2R_14_23435001 chr2R_23435001 RAL-109_125b 1879 chr2R 23461092 23461132 chr2R 23461224 23461264 7 124 11.0 12.0 11.5 0.6 172 chr2R 23461092 intron CG43795 + chr2R 23461178 intron CG43795 + chr2R 23461264 intron CG43795 + chr2R_7_23460001 chr2R_23460001 RAL-109_125b 1880 chr2R 23467523 23467572 chr2R 23467702 23467740 13 171 10.0 5.0 7.5 1.5 217 chr2R 23467523 intron CG43795 + chr2R 23467632 intron CG43795 + chr2R 23467740 intron CG43795 + chr2R_13_23465001 chr2R_23465001 RAL-109_125b 1881 chr2R 23487410 23487478 chr2R 23487531 23487590 21 123 4.0 4.0 4.0 4.2 180 chr2R 23487410 intron CG43795 + chr2R 23487500 intron CG43795 + chr2R 23487590 intron CG43795 + chr2R_21_23485001 chr2R_23485001 RAL-109_125b 1882 chr2R 23508868 23508940 chr2R 23509035 23509107 19 164 6.0 5.5 5.8 2.8 239 chr2R 23508868 intergenic not near genes chr2R 23508988 intergenic not near genes chr2R 23509107 intergenic not near genes chr2R_19_23505001 chr2R_23505001 RAL-109_125b 1883 chr2R 23515134 23515145 chr2R 23515589 23515600 4 454 18.0 8.0 13.0 0.3 466 chr2R 23515134 intergenic not near genes chr2R 23515367 intergenic not near genes chr2R 23515600 intergenic not near genes chr2R_4_23515001 chr2R_23515001 RAL-109_125b 1884 chr2R 23515146 23515160 chr2R 23515583 23515613 6 451 16.5 5.5 11.0 0.5 467 chr2R 23515146 intergenic not near genes chr2R 23515380 intergenic not near genes chr2R 23515613 intergenic not near genes chr2R_6_23515001 chr2R_23515001 RAL-109_125b 1885 chr2R 23522378 23522444 chr2R 23522492 23522567 26 118 7.0 10.5 8.8 2.7 189 chr2R 23522378 intron RabX1 - chr2R 23522472 intron RabX1 - chr2R 23522567 intron RabX1 - chr2R_26_23520001 chr2R_23520001 RAL-109_125b 1886 chr2R 23529537 23529539 chr2R 23537156 23537165 412 4 7623 15.5 11.0 13.2 0.3 7628 chr2R 23529537 intron bw - chr2R 23533351 intron bw - chr2R 23537165 exon bw - chr2R_4_23530001 chr2R_23530001 RAL-109_125b 1887 chr2R 23529544 23529583 chr2R 23537152 23537188 412 10 7612 7.0 10.5 8.8 1.0 7644 chr2R 23529544 intron bw - chr2R 23533366 intron bw - chr2R 23537188 exon bw - chr2R_10_23530001 chr2R_23530001 RAL-109_125b 1888 chr2R 23638335 23638392 chr2R 23638469 23638521 17 132 7.5 7.5 7.5 2.0 186 chr2R 23638335 intron retn + chr2R 23638428 intron,3` UTR retn +,CR45153 - chr2R 23638521 intron,3` UTR retn +,CR45153 - chr2R_17_23635001 chr2R_23635001 RAL-109_125b 1889 chr2R 23674131 23674211 chr2R 23674261 23674329 26 124 7.5 7.0 7.2 3.2 198 chr2R 23674131 intron Pde8 + chr2R 23674230 intron Pde8 + chr2R 23674329 exon Pde8 + chr2R_26_23670001 chr2R_23670001 RAL-109_125b 1890 chr2R 23726179 23726255 chr2R 23726319 23726350 24 128 7.0 10.0 8.5 2.5 171 chr2R 23726179 intron Sesn + chr2R 23726264 intron Sesn + chr2R 23726350 intron Sesn + chr2R_24_23725001 chr2R_23725001 RAL-109_125b 1891 chr2R 23739718 23739725 chr2R 23739830 23739840 4 113 14.5 6.0 10.2 0.4 122 chr2R 23739718 intron egl - chr2R 23739779 intron egl - chr2R 23739840 intron egl - chr2R_4_23735001 chr2R_23735001 RAL-109_125b 1892 chr2R 23747282 23747313 chr2R 23748959 23748965 11 1675 36.5 12.5 24.5 0.4 1683 chr2R 23747282 intergenic CG13560 +,egl - chr2R 23748124 exon CG13560 + chr2R 23748965 intergenic CG12491 -,CG34105 -,CG13560 + chr2R_11_23745001 chr2R_23745001 RAL-109_125b 1893 chr2R 23802251 23802311 chr2R 23802389 23802454 10 132 0.0 13.5 6.8 1.3 203 chr2R 23802251 exon CG30177 + chr2R 23802352 3` UTR CG30177 + chr2R 23802454 3` UTR CG30177 + chr2R_10_23800001 chr2R_23800001 RAL-109_125b 1894 chr2R 23865776 23865859 chr2R 23865908 23865990 28 130 4.0 0.0 2.0 9.3 214 chr2R 23865776 intron CG5569 + chr2R 23865883 intron CG5569 + chr2R 23865990 intron CG5569 + chr2R_28_23865001 chr2R_23865001 RAL-109_125b 1895 chr2R 23914267 23914326 chr2R 23921921 23921999 412 28 7666 11.5 4.0 7.8 3.2 7732 chr2R 23914267 exon kcc + chr2R 23918133 intron kcc + chr2R 23921999 exon kcc + chr2R_28_23915001 chr2R_23915001 RAL-109_125b 1896 chr2R 24025668 24025740 chr2R 24025820 24025889 32 146 9.0 8.5 8.8 3.3 221 chr2R 24025668 3` UTR,3` UTR CR45350 -,Adk2 + chr2R 24025778 3` UTR Adk2 + chr2R 24025889 intergenic Adk2 +,CR45350 -,PebIII + chr2R_32_24025001 chr2R_24025001 RAL-109_125b 1897 chr2R 24031341 24031347 chr2R 24031469 24031480 4 132 21.0 9.5 15.2 0.2 139 chr2R 24031341 5` UTR CG30172 - chr2R 24031410 5` UTR CG30172 - chr2R 24031480 intergenic CG30172 -,Chi - chr2R_4_24030001 chr2R_24030001 RAL-109_125b 1898 chr2R 24031349 24031405 chr2R 24031468 24031539 31 132 9.0 9.5 9.2 3.0 190 chr2R 24031349 5` UTR CG30172 - chr2R 24031444 intergenic CG30172 -,Chi - chr2R 24031539 3` UTR Chi - chr2R_31_24030001 chr2R_24030001 RAL-109_125b 1899 chr2R 24138260 24138269 chr2R 24138469 24138478 5 209 21.0 13.0 17.0 0.3 218 chr2R 24138260 intergenic CG4065 -,CR44826 + chr2R 24138369 intergenic CR44826 +,CG4065 - chr2R 24138478 intergenic CR44826 +,CG4065 - chr2R_5_24135001 chr2R_24135001 RAL-109_125b 1900 chr2R 24138278 24138334 chr2R 24138468 24138543 26 204 8.0 12.0 10.0 2.4 265 chr2R 24138278 intergenic CG4065 -,CR44826 + chr2R 24138410 intergenic CR44826 +,CG4065 - chr2R 24138543 intergenic CR44826 +,CG4065 - chr2R_26_24135001 chr2R_24135001 RAL-109_125b 1901 chr2R 24147026 24147054 chr2R 24154654 24154682 412 5 7626 11.5 6.5 9.0 0.5 7656 chr2R 24147026 intron Dat + chr2R 24150854 intron Dat + chr2R 24154682 intron Dat + chr2R_5_24150001 chr2R_24150001 RAL-109_125b 1902 chr2R 24147057 24147095 chr2R 24154644 24154707 412 22 7610 4.5 6.0 5.2 3.5 7650 chr2R 24147057 intron Dat + chr2R 24150882 intron Dat + chr2R 24154707 intron Dat + chr2R_22_24150001 chr2R_24150001 RAL-109_125b 1903 chr2R 24156654 24156699 chr2R 24156769 24156794 21 121 8.5 11.0 9.8 1.9 140 chr2R 24156654 intron Dat + chr2R 24156724 intron Dat + chr2R 24156794 intron Dat + chr2R_21_24155001 chr2R_24155001 RAL-109_125b 1904 chr2R 24177191 24177259 chr2R 24184726 24184794 412 24 7531 6.0 11.0 8.5 2.5 7603 chr2R 24177191 3` UTR Nop60B + chr2R 24180992 intron Nop60B + chr2R 24184794 intron Nop60B + chr2R_24_24180001 chr2R_24180001 RAL-109_125b 1905 chr2R 24212245 24212318 chr2R 24212393 24212466 30 146 9.0 10.0 9.5 2.9 221 chr2R 24212245 intergenic CG30419 - chr2R 24212356 intergenic CG30419 - chr2R 24212466 intergenic CG30419 - chr2R_30_24210001 chr2R_24210001 RAL-109_125b 1906 chr2R 24228363 24228430 chr2R 24228474 24228517 26 104 8.0 6.0 7.0 3.2 154 chr2R 24228363 intron CG30419 - chr2R 24228440 intron CG30419 - chr2R 24228517 intron CG30419 - chr2R_26_24225001 chr2R_24225001 RAL-109_125b 1907 chr2R 24281534 24281574 chr2R 24281644 24281660 14 108 9.5 10.0 9.8 1.3 126 chr2R 24281534 intron nvy + chr2R 24281597 intron nvy + chr2R 24281660 intron nvy + chr2R_14_24280001 chr2R_24280001 RAL-109_125b 1908 chr2R 24303480 24303537 chr2R 24303609 24303666 21 118 9.5 13.5 11.5 1.7 186 chr2R 24303480 intergenic not near genes chr2R 24303573 intergenic not near genes chr2R 24303666 intergenic not near genes chr2R_21_24300001 chr2R_24300001 RAL-109_125b 1909 chr2R 24320136 24320203 chr2R 24320263 24320330 16 115 6.5 7.0 6.8 2.1 194 chr2R 24320136 intergenic not near genes chr2R 24320233 intergenic not near genes chr2R 24320330 intergenic not near genes chr2R_16_24320001 chr2R_24320001 RAL-109_125b 1910 chr2R 24353387 24353427 chr2R 24361796 24361814 roo 12 8406 10.0 6.0 8.0 1.3 8427 chr2R 24353387 intron,intron bs +,CR44811 - chr2R 24357600 intron,intron bs +,CR44811 - chr2R 24361814 intron,intron bs +,CR44811 - chr2R_12_24355001 chr2R_24355001 RAL-109_125b 1911 chr2R 24430925 24430941 chr2R 24431063 24431079 6 138 0.0 19.0 9.5 0.6 154 chr2R 24430925 intergenic CG15873 -,Pgam5-2 - chr2R 24431002 intergenic CG15873 -,Pgam5-2 - chr2R 24431079 intergenic Pgam5-2 -,CG15873 - chr2R_6_24430001 chr2R_24430001 RAL-109_125b 1912 chr2R 24470314 24470384 chr2R 24470459 24470529 18 142 6.0 10.0 8.0 2.0 215 chr2R 24470314 intron CG13579 + chr2R 24470422 intron CG13579 + chr2R 24470529 intron CG13579 + chr2R_18_24470001 chr2R_24470001 RAL-109_125b 1913 chr2R 24493040 24493089 chr2R 24493179 24493228 21 139 10.5 6.0 8.2 2.3 188 chr2R 24493040 intergenic CG13589 -,CG13590 - chr2R 24493134 intergenic CG13590 -,CG13589 - chr2R 24493228 intergenic CG13590 -,CG13589 - chr2R_21_24490001 chr2R_24490001 RAL-109_125b 1914 chr2R 24509267 24509334 chr2R 24509402 24509469 28 134 4.5 10.5 7.5 3.3 202 chr2R 24509267 intergenic Letm1 - chr2R 24509368 intergenic Letm1 - chr2R 24509469 intergenic Letm1 - chr2R_28_24505001 chr2R_24505001 RAL-109_125b 1915 chr2R 24520567 24520637 chr2R 24520700 24520746 26 126 5.5 11.0 8.2 2.8 179 chr2R 24520567 exon Ir60d + chr2R 24520656 exon Ir60d + chr2R 24520746 exon Ir60d + chr2R_26_24520001 chr2R_24520001 RAL-109_125b 1916 chr2R 24553642 24553649 chr2R 24553735 24553781 4 116 10.0 1.5 5.8 0.6 139 chr2R 24553642 intron,intron CG4622 -,ITP + chr2R 24553712 intron,intron CG4622 -,ITP + chr2R 24553781 intron,intron CG4622 -,ITP + chr2R_4_24550001 chr2R_24550001 RAL-109_125b 1917 chr2R 24584313 24584371 chr2R 24584430 24584498 25 126 6.0 7.5 6.8 3.2 185 chr2R 24584313 intron pio + chr2R 24584406 intron pio + chr2R 24584498 intron pio + chr2R_25_24580001 chr2R_24580001 RAL-109_125b 1918 chr2R 24592907 24592928 chr2R 24593050 24593071 11 142 21.0 8.0 14.5 0.7 164 chr2R 24592907 intron pio + chr2R 24592989 intron pio + chr2R 24593071 intron pio + chr2R_11_24590001 chr2R_24590001 RAL-109_125b 1919 chr2R 24592931 24592964 chr2R 24593049 24593091 14 135 13.0 8.0 10.5 1.2 160 chr2R 24592931 intron pio + chr2R 24593011 intron pio + chr2R 24593091 intron pio + chr2R_14_24590001 chr2R_24590001 RAL-109_125b 1920 chr2R 24647559 24647613 chr2R 24655150 24655220 412 33 7601 8.5 5.5 7.0 4.1 7661 chr2R 24647559 intergenic not near genes chr2R 24651390 intergenic not near genes chr2R 24655220 intergenic not near genes chr2R_33_24650001 chr2R_24650001 RAL-109_125b 1921 chr2R 24705538 24705559 chr2R 24705669 24705690 5 131 28.0 12.5 20.2 0.2 152 chr2R 24705538 intron Mid1 - chr2R 24705614 intron Mid1 - chr2R 24705690 intron Mid1 - chr2R_5_24705001 chr2R_24705001 RAL-109_125b 1922 chr2R 24722320 24722388 chr2R 24722452 24722520 23 132 7.5 11.5 9.5 2.2 200 chr2R 24722320 intron Mid1 - chr2R 24722420 intron Mid1 - chr2R 24722520 intron Mid1 - chr2R_23_24720001 chr2R_24720001 RAL-109_125b 1923 chr2R 24727844 24727916 chr2R 24735397 24735447 mdg1 29 7541 8.0 11.0 9.5 2.8 7603 chr2R 24727844 intron Mid1 - chr2R 24731646 intron Mid1 - chr2R 24735447 intron Mid1 - chr2R_29_24730001 chr2R_24730001 RAL-109_125b 1924 chr2R 24763564 24763639 chr2R 24765590 24765602 G2 20 2006 9.0 9.0 9.0 2.0 2038 chr2R 24763564 exon CG3894 + chr2R 24764583 intron CG3894 + chr2R 24765602 exon CG3894 + chr2R_20_24760001 chr2R_24760001 RAL-109_125b 1925 chr2R 24813373 24813445 chr2R 24813520 24813571 22 145 3.5 8.5 6.0 3.1 198 chr2R 24813373 intergenic not near genes chr2R 24813472 intergenic not near genes chr2R 24813571 intergenic not near genes chr2R_22_24810001 chr2R_24810001 RAL-109_125b 1926 chr2R 24883839 24883907 chr2R 24883972 24884003 24 127 8.5 9.0 8.8 2.4 164 chr2R 24883839 intron NKAIN + chr2R 24883921 intron NKAIN + chr2R 24884003 intron NKAIN + chr2R_24_24880001 chr2R_24880001 RAL-109_125b 1927 chr2R 25014512 25014571 chr2R 25014619 25014689 4 117 7.5 8.5 8.0 0.4 177 chr2R 25014512 intron uzip + chr2R 25014600 intron uzip + chr2R 25014689 intron uzip + chr2R_4_25010001 chr2R_25010001 RAL-109_125b 1928 chr2R 25018296 25018354 chr2R 25018447 25018505 22 142 8.0 9.0 8.5 2.3 209 chr2R 25018296 intron uzip + chr2R 25018400 intron uzip + chr2R 25018505 intron uzip + chr2R_22_25015001 chr2R_25015001 RAL-109_125b 1929 chr2R 25022597 25022671 chr2R 25022731 25022800 33 133 7.0 9.5 8.2 3.6 203 chr2R 25022597 intron uzip + chr2R 25022698 intron uzip + chr2R 25022800 intron uzip + chr2R_33_25020001 chr2R_25020001 RAL-109_125b 1930 chr2R 25053078 25053113 chr2R 25053210 25053245 13 131 14.0 8.5 11.2 1.1 167 chr2R 25053078 intergenic not near genes chr2R 25053162 intergenic not near genes chr2R 25053245 intergenic not near genes chr2R_13_25050001 chr2R_25050001 RAL-109_125b 1931 chr2R 25101228 25101260 chr2R 25101380 25101412 14 152 14.0 7.5 10.8 1.2 184 chr2R 25101228 intron lov - chr2R 25101320 intron lov - chr2R 25101412 intron lov - chr2R_14_25100001 chr2R_25100001 RAL-109_125b 1932 chr2R 25101262 25101296 chr2R 25101378 25101448 15 143 7.5 7.0 7.2 1.8 186 chr2R 25101262 intron lov - chr2R 25101355 intron lov - chr2R 25101448 intron lov - chr2R_15_25100001 chr2R_25100001 RAL-109_125b 1933 chr2R 25141621 25141677 chr2R 25159349 25159417 roo 21 17738 5.5 6.5 6.0 3.0 17796 chr2R 25141621 intergenic not near genes chr2R 25150519 intergenic not near genes chr2R 25159417 intergenic not near genes chr2R_21_25150001 chr2R_25150001 RAL-109_125b 1934 chr2R 25180714 25180791 chr2R 25180843 25180918 25 126 9.0 6.5 7.8 2.8 204 chr2R 25180714 intergenic not near genes chr2R 25180816 intergenic not near genes chr2R 25180918 intergenic not near genes chr2R_25_25180001 chr2R_25180001 RAL-109_125b 1935 chr2R 25207815 25207878 chr2R 25208207 25208270 23 392 37.5 41.5 39.5 0.6 455 chr2R 25207815 5` UTR CG9380 - chr2R 25208042 intron CG9380 - chr2R 25208270 intron CG9380 - chr2R_23_25205001 chr2R_25205001 RAL-109_125b 1936 chr3L 27116 27191 chr3L 27325 27367 17 203 5.0 2.5 3.8 3.5 251 chr3L 27116 intergenic not near genes chr3L 27242 intergenic not near genes chr3L 27367 intergenic not near genes chr3L_17_25001 chr3L_25001 RAL-109_125b 1937 chr3L 51347 51411 chr3L 51495 51559 40 145 10.5 11.0 10.8 3.4 212 chr3L 51347 intergenic not near genes chr3L 51453 intergenic not near genes chr3L 51559 intergenic not near genes chr3L_40_50001 chr3L_50001 RAL-109_125b 1938 chr3L 88674 88747 chr3L 88802 88875 21 123 7.5 6.0 6.8 2.7 201 chr3L 88674 intergenic not near genes chr3L 88774 intergenic not near genes chr3L 88875 intergenic not near genes chr3L_21_85001 chr3L_85001 RAL-109_125b 1939 chr3L 94349 94414 chr3L 94514 94579 17 162 5.0 12.0 8.5 1.8 230 chr3L 94349 intergenic not near genes chr3L 94464 intergenic not near genes chr3L 94579 intergenic not near genes chr3L_17_90001 chr3L_90001 RAL-109_125b 1940 chr3L 110167 110234 chr3L 119384 119443 roo 24 9216 10.0 4.0 7.0 3.0 9276 chr3L 110167 intergenic not near genes chr3L 114805 intergenic not near genes chr3L 119443 intergenic not near genes chr3L_24_110001 chr3L_110001 RAL-109_125b 1941 chr3L 155738 155808 chr3L 155865 155935 31 126 14.5 7.5 11.0 2.6 197 chr3L 155738 intron p130CAS + chr3L 155836 intron p130CAS + chr3L 155935 intron p130CAS + chr3L_31_155001 chr3L_155001 RAL-109_125b 1942 chr3L 338766 338833 chr3L 338910 338977 38 144 13.0 10.5 11.8 3.0 211 chr3L 338766 intron,intron Ptpmeg +,mthl10 - chr3L 338872 intron,intron Ptpmeg +,mthl10 - chr3L 338977 intron,intron Ptpmeg +,mthl10 - chr3L_38_335001 chr3L_335001 RAL-109_125b 1943 chr3L 343150 343176 chr3L 343323 343349 12 171 15.5 14.0 14.8 0.8 199 chr3L 343150 intron Ptpmeg + chr3L 343250 intron Ptpmeg + chr3L 343349 intron Ptpmeg + chr3L_12_340001 chr3L_340001 RAL-109_125b 1944 chr3L 402661 402675 chr3L 409764 409772 297 7 7102 16.5 15.0 15.8 0.4 7111 chr3L 402661 intergenic not near genes chr3L 406216 intergenic not near genes chr3L 409772 intergenic not near genes chr3L_7_405001 chr3L_405001 RAL-109_125b 1945 chr3L 402678 402715 chr3L 409747 409816 297 20 7097 10.5 13.0 11.8 1.6 7138 chr3L 402678 intergenic not near genes chr3L 406247 intergenic not near genes chr3L 409816 intergenic not near genes chr3L_20_405001 chr3L_405001 RAL-109_125b 1946 chr3L 421016 421069 chr3L 421162 421215 26 144 8.5 12.0 10.2 2.3 199 chr3L 421016 intergenic not near genes chr3L 421116 intergenic not near genes chr3L 421215 intergenic not near genes chr3L_26_420001 chr3L_420001 RAL-109_125b 1947 chr3L 428146 428221 chr3L 428317 428358 11 164 4.5 0.0 2.2 3.4 212 chr3L 428146 intergenic not near genes chr3L 428252 intergenic not near genes chr3L 428358 intergenic not near genes chr3L_11_425001 chr3L_425001 RAL-109_125b 1948 chr3L 494555 494623 chr3L 494687 494761 30 134 7.0 5.5 6.2 4.2 206 chr3L 494555 intron klar - chr3L 494658 intron klar - chr3L 494761 intron klar - chr3L_30_490001 chr3L_490001 RAL-109_125b 1949 chr3L 514228 514293 chr3L 514355 514420 33 126 10.0 10.5 10.2 2.9 192 chr3L 514228 intron klar - chr3L 514324 intron klar - chr3L 514420 intron klar - chr3L_33_510001 chr3L_510001 RAL-109_125b 1950 chr3L 563927 563943 chr3L 564155 564172 9 228 21.0 12.0 16.5 0.5 245 chr3L 563927 intron hipk + chr3L 564050 intron hipk + chr3L 564172 intron hipk + chr3L_9_560001 chr3L_560001 RAL-109_125b 1951 chr3L 563945 563999 chr3L 564154 564204 17 226 8.5 12.0 10.2 1.5 259 chr3L 563945 intron hipk + chr3L 564074 intron hipk + chr3L 564204 intron hipk + chr3L_17_560001 chr3L_560001 RAL-109_125b 1952 chr3L 617644 617705 chr3L 617800 617861 27 155 2.0 6.5 4.2 5.2 217 chr3L 617644 intergenic not near genes chr3L 617752 intergenic not near genes chr3L 617861 intergenic not near genes chr3L_27_615001 chr3L_615001 RAL-109_125b 1953 chr3L 665814 665869 chr3L 665947 666002 18 131 4.5 5.0 4.8 3.1 188 chr3L 665814 intergenic not near genes chr3L 665908 intergenic not near genes chr3L 666002 intergenic not near genes chr3L_18_665001 chr3L_665001 RAL-109_125b 1954 chr3L 668813 668846 chr3L 668938 668984 15 143 7.0 9.5 8.2 1.6 171 chr3L 668813 intergenic not near genes chr3L 668898 intergenic not near genes chr3L 668984 intergenic not near genes chr3L_15_665001 chr3L_665001 RAL-109_125b 1955 chr3L 767777 767781 chr3L 767915 767919 5 138 0.0 6.5 3.2 1.2 142 chr3L 767777 intergenic not near genes chr3L 767848 intergenic not near genes chr3L 767919 intergenic not near genes chr3L_5_765001 chr3L_765001 RAL-109_125b 1956 chr3L 767783 767849 chr3L 767911 767986 24 135 0.0 5.0 2.5 6.9 203 chr3L 767783 intergenic not near genes chr3L 767884 intergenic not near genes chr3L 767986 intergenic not near genes chr3L_24_765001 chr3L_765001 RAL-109_125b 1957 chr3L 789869 789898 chr3L 790404 790433 roo 7 535 22.5 11.5 17.0 0.4 564 chr3L 789869 intergenic not near genes chr3L 790151 intergenic not near genes chr3L 790433 intergenic not near genes chr3L_7_790001 chr3L_790001 RAL-109_125b 1958 chr3L 789903 789941 chr3L 790398 790476 roo 15 531 9.5 10.0 9.8 1.4 573 chr3L 789903 intergenic not near genes chr3L 790190 intergenic not near genes chr3L 790476 intergenic not near genes chr3L_15_790001 chr3L_790001 RAL-109_125b 1959 chr3L 857951 858030 chr3L 866482 866549 Tirant 17 8524 7.0 7.0 7.0 2.1 8598 chr3L 857951 intergenic not near genes chr3L 862250 intergenic not near genes chr3L 866549 5` UTR CG12502 + chr3L_17_860001 chr3L_860001 RAL-109_125b 1960 chr3L 925142 925198 chr3L 932604 932666 mdg1 23 7471 8.5 3.5 6.0 3.3 7524 chr3L 925142 intron Glut1 + chr3L 928904 intron Glut1 + chr3L 932666 intron Glut1 + chr3L_23_925001 chr3L_925001 RAL-109_125b 1961 chr3L 939732 939789 chr3L 940903 940960 jockey 27 1169 8.5 9.5 9.0 2.7 1228 chr3L 939732 intron Glut1 + chr3L 940346 intron Glut1 + chr3L 940960 intron Glut1 + chr3L_27_940001 chr3L_940001 RAL-109_125b 1962 chr3L 960967 961039 chr3L 961110 961182 23 142 5.0 8.0 6.5 3.1 215 chr3L 960967 intron Glut1 + chr3L 961074 intron Glut1 + chr3L 961182 intron Glut1 + chr3L_23_960001 chr3L_960001 RAL-109_125b 1963 chr3L 1015102 1015169 chr3L 1015234 1015297 9 124 0.0 0.5 0.2 7.5 195 chr3L 1015102 intron trio - chr3L 1015200 intron trio - chr3L 1015297 intron trio - chr3L_9_1015001 chr3L_1015001 RAL-109_125b 1964 chr3L 1021797 1021814 chr3L 1021922 1021927 6 126 7.5 0.5 4.0 1.2 130 chr3L 1021797 intron trio - chr3L 1021862 intron trio - chr3L 1021927 intron trio - chr3L_6_1020001 chr3L_1020001 RAL-109_125b 1965 chr3L 1031541 1031577 chr3L 1031662 1031690 10 122 15.5 11.0 13.2 0.7 149 chr3L 1031541 intron trio - chr3L 1031616 intron trio - chr3L 1031690 intron trio - chr3L_10_1030001 chr3L_1030001 RAL-109_125b 1966 chr3L 1031581 1031608 chr3L 1031657 1031679 10 106 11.5 11.0 11.2 0.8 98 chr3L 1031581 intron trio - chr3L 1031630 intron trio - chr3L 1031679 intron trio - chr3L_10_1030001 chr3L_1030001 RAL-109_125b 1967 chr3L 1047309 1047327 chr3L 1055171 1055184 412 5 7859 12.5 5.0 8.8 0.5 7875 chr3L 1047309 intron bab1 - chr3L 1051246 intron bab1 - chr3L 1055184 intron bab1 - chr3L_5_1050001 chr3L_1050001 RAL-109_125b 1968 chr3L 1047330 1047381 chr3L 1055162 1055228 412 14 7844 7.0 4.0 5.5 2.2 7898 chr3L 1047330 intron bab1 - chr3L 1051279 intron bab1 - chr3L 1055228 intron bab1 - chr3L_14_1050001 chr3L_1050001 RAL-109_125b 1969 chr3L 1094992 1095035 chr3L 1095108 1095166 19 122 8.5 7.0 7.8 2.2 174 chr3L 1094992 intron bab1 - chr3L 1095079 intron bab1 - chr3L 1095166 intron bab1 - chr3L_19_1095001 chr3L_1095001 RAL-109_125b 1970 chr3L 1103974 1104014 chr3L 1104190 1104255 21 237 6.0 12.5 9.2 2.1 281 chr3L 1103974 intergenic not near genes chr3L 1104114 intergenic not near genes chr3L 1104255 intergenic not near genes chr3L_21_1100001 chr3L_1100001 RAL-109_125b 1971 chr3L 1113545 1113564 chr3L 1113671 1113683 6 125 4.0 5.5 4.8 1.0 138 chr3L 1113545 intergenic not near genes chr3L 1113614 intergenic not near genes chr3L 1113683 intergenic not near genes chr3L_6_1110001 chr3L_1110001 RAL-109_125b 1972 chr3L 1114956 1115025 chr3L 1115091 1115160 32 134 5.0 9.5 7.2 3.9 204 chr3L 1114956 intergenic not near genes chr3L 1115058 intergenic not near genes chr3L 1115160 intergenic not near genes chr3L_32_1115001 chr3L_1115001 RAL-109_125b 1973 chr3L 1127752 1127767 chr3L 1127882 1127897 8 129 12.5 22.0 17.2 0.4 145 chr3L 1127752 intergenic not near genes chr3L 1127824 intergenic not near genes chr3L 1127897 intergenic not near genes chr3L_8_1125001 chr3L_1125001 RAL-109_125b 1974 chr3L 1145195 1145244 chr3L 1145319 1145348 17 122 7.0 0.0 3.5 3.8 153 chr3L 1145195 intron bab2 - chr3L 1145272 intron bab2 - chr3L 1145348 intron bab2 - chr3L_17_1145001 chr3L_1145001 RAL-109_125b 1975 chr3L 1154079 1154156 chr3L 1163282 1163356 roo 20 9198 7.5 6.5 7.0 2.5 9277 chr3L 1154079 intron bab2 - chr3L 1158718 intron bab2 - chr3L 1163356 intron bab2 - chr3L_20_1155001 chr3L_1155001 RAL-109_125b 1976 chr3L 1166979 1167013 chr3L 1167101 1167140 21 127 8.0 4.5 6.2 2.9 161 chr3L 1166979 intron bab2 - chr3L 1167060 intron bab2 - chr3L 1167140 intron bab2 - chr3L_21_1165001 chr3L_1165001 RAL-109_125b 1977 chr3L 1214170 1214183 chr3L 1214297 1214310 8 127 5.0 2.0 3.5 1.8 140 chr3L 1214170 intron mwh + chr3L 1214240 intron mwh + chr3L 1214310 intron mwh + chr3L_8_1210001 chr3L_1210001 RAL-109_125b 1978 chr3L 1214199 1214244 chr3L 1214296 1214371 9 124 5.0 2.5 3.8 1.9 172 chr3L 1214199 intron mwh + chr3L 1214285 intron mwh + chr3L 1214371 intron mwh + chr3L_9_1210001 chr3L_1210001 RAL-109_125b 1979 chr3L 1219551 1219614 chr3L 1227328 1227396 412 19 7775 5.0 8.0 6.5 2.5 7845 chr3L 1219551 intron mwh + chr3L 1223474 intron mwh + chr3L 1227396 intron mwh + chr3L_19_1220001 chr3L_1220001 RAL-109_125b 1980 chr3L 1236189 1236233 chr3L 1236316 1236327 12 124 9.0 0.0 4.5 2.2 138 chr3L 1236189 intron CG9194 + chr3L 1236258 intron CG9194 + chr3L 1236327 intron CG9194 + chr3L_12_1235001 chr3L_1235001 RAL-109_125b 1981 chr3L 1260112 1260151 chr3L 1260242 1260281 15 129 8.0 5.5 6.8 1.9 169 chr3L 1260112 intron CG9134 + chr3L 1260196 intron CG9134 + chr3L 1260281 intron CG9134 + chr3L_15_1260001 chr3L_1260001 RAL-109_125b 1982 chr3L 1268102 1268179 chr3L 1268339 1268361 22 232 5.0 0.5 2.8 5.8 259 chr3L 1268102 intron CG9134 + chr3L 1268232 intron CG9134 + chr3L 1268361 intron CG9134 + chr3L_22_1265001 chr3L_1265001 RAL-109_125b 1983 chr3L 1314991 1315000 chr3L 1315107 1315128 7 123 49.0 38.0 43.5 0.2 137 chr3L 1314991 exon CG9153 + chr3L 1315060 exon CG9153 + chr3L 1315128 exon CG9153 + chr3L_7_1315001 chr3L_1315001 RAL-109_125b 1984 chr3L 1315004 1315054 chr3L 1315103 1315152 22 109 41.0 36.5 38.8 0.6 148 chr3L 1315004 exon CG9153 + chr3L 1315078 exon CG9153 + chr3L 1315152 exon CG9153 + chr3L_22_1315001 chr3L_1315001 RAL-109_125b 1985 chr3L 1310986 1311058 chr3L 1315806 1315873 25 4825 63.5 66.5 65.0 0.4 4887 chr3L 1310986 exon CG2469 + chr3L 1313430 intergenic CG9186 -,CG9153 + chr3L 1315873 exon CG9153 + chr3L_25_1310001 chr3L_1310001 RAL-109_125b 1986 chr3L 1356996 1357010 chr3L 1357093 1357137 13 120 8.5 14.5 11.5 1.0 141 chr3L 1356996 intron Ptp61F - chr3L 1357066 intron Ptp61F - chr3L 1357137 intron Ptp61F - chr3L_13_1355001 chr3L_1355001 RAL-109_125b 1987 chr3L 1385125 1385202 chr3L 1385263 1385340 25 137 7.0 3.0 5.0 4.2 215 chr3L 1385125 intron,intron Ptp61F -,ru + chr3L 1385232 intron,intron Ptp61F -,ru + chr3L 1385340 intron,intron Ptp61F -,ru + chr3L_25_1385001 chr3L_1385001 RAL-109_125b 1988 chr3L 1424764 1424773 chr3L 1430022 1430069 Rt1a 4 5278 2.0 9.5 5.8 0.6 5305 chr3L 1424764 intron Ptp61F - chr3L 1427416 intron Ptp61F - chr3L 1430069 intron Ptp61F - chr3L_4_1425001 chr3L_1425001 RAL-109_125b 1989 chr3L 1463373 1463381 chr3L 1463504 1463512 4 131 1.5 6.5 4.0 0.8 139 chr3L 1463373 intron Ptp61F - chr3L 1463442 intron Ptp61F - chr3L 1463512 intron Ptp61F - chr3L_4_1460001 chr3L_1460001 RAL-109_125b 1990 chr3L 1463384 1463436 chr3L 1463500 1463566 21 122 1.5 5.0 3.2 5.0 182 chr3L 1463384 intron Ptp61F - chr3L 1463475 intron Ptp61F - chr3L 1463566 intron Ptp61F - chr3L_21_1460001 chr3L_1460001 RAL-109_125b 1991 chr3L 1468450 1468466 chr3L 1468590 1468606 5 140 9.5 0.0 4.8 0.9 156 chr3L 1468450 intron,3` UTR Ptp61F -,rho + chr3L 1468528 intron,3` UTR Ptp61F -,rho + chr3L 1468606 intron,3` UTR Ptp61F -,rho + chr3L_5_1465001 chr3L_1465001 RAL-109_125b 1992 chr3L 1485715 1485741 chr3L 1486909 1486926 1360 12 1202 7.5 15.0 11.2 1.0 1211 chr3L 1485715 intron stet - chr3L 1486320 intron stet - chr3L 1486926 intron stet - chr3L_12_1485001 chr3L_1485001 RAL-109_125b 1993 chr3L 1501959 1501988 chr3L 1502090 1502096 8 128 1.5 10.0 5.8 1.2 137 chr3L 1501959 intron pUf68 - chr3L 1502028 intron pUf68 - chr3L 1502096 intron pUf68 - chr3L_8_1500001 chr3L_1500001 RAL-109_125b 1994 chr3L 1501996 1502016 chr3L 1502080 1502134 13 118 1.5 6.5 4.0 2.6 138 chr3L 1501996 intron pUf68 - chr3L 1502065 intron pUf68 - chr3L 1502134 intron pUf68 - chr3L_13_1500001 chr3L_1500001 RAL-109_125b 1995 chr3L 1505964 1506016 chr3L 1513611 1513663 17.6 19 7647 10.5 15.0 12.8 1.4 7699 chr3L 1505964 intron,intron Psa +,cue - chr3L 1509814 intron,intron Psa +,cue - chr3L 1513663 intron,intron Psa +,cue - chr3L_19_1505001 chr3L_1505001 RAL-109_125b 1996 chr3L 1536808 1536885 chr3L 1536942 1537019 21 131 7.0 6.0 6.5 2.8 211 chr3L 1536808 5` UTR CG12091 - chr3L 1536914 intergenic CG12091 -,CG7852 + chr3L 1537019 intergenic CG7852 +,CG12091 - chr3L_21_1535001 chr3L_1535001 RAL-109_125b 1997 chr3L 1571422 1571492 chr3L 1571557 1571627 23 134 2.0 6.5 4.2 4.4 205 chr3L 1571422 intron CG12004 + chr3L 1571524 intron CG12004 + chr3L 1571627 intron CG12004 + chr3L_23_1570001 chr3L_1570001 RAL-109_125b 1998 chr3L 1584112 1584122 chr3L 1584243 1584254 5 132 0.0 11.5 5.8 0.7 142 chr3L 1584112 intron CG13917 + chr3L 1584183 intron CG13917 + chr3L 1584254 intron CG13917 + chr3L_5_1580001 chr3L_1580001 RAL-109_125b 1999 chr3L 1633791 1633825 chr3L 1633930 1633959 19 138 20.5 13.5 17.0 1.1 168 chr3L 1633791 exon nSyb - chr3L 1633875 intron nSyb - chr3L 1633959 intron nSyb - chr3L_19_1630001 chr3L_1630001 RAL-109_125b 2000 chr3L 1728480 1728550 chr3L 1728615 1728634 31 128 9.0 8.0 8.5 3.3 154 chr3L 1728480 intron drpr - chr3L 1728557 intron drpr - chr3L 1728634 intron drpr - chr3L_31_1725001 chr3L_1725001 RAL-109_125b 2001 chr3L 1740813 1740879 chr3L 1741106 1741160 pogo 19 288 11.5 11.5 11.5 1.5 347 chr3L 1740813 intron Gk + chr3L 1740986 intron Gk + chr3L 1741160 intron Gk + chr3L_19_1740001 chr3L_1740001 RAL-109_125b 2002 chr3L 1821595 1821647 chr3L 1821727 1821777 16 131 5.5 6.0 5.8 2.4 182 chr3L 1821595 intron GV1 + chr3L 1821686 intron GV1 + chr3L 1821777 intron GV1 + chr3L_16_1820001 chr3L_1820001 RAL-109_125b 2003 chr3L 1848594 1848671 chr3L 1848722 1848792 27 125 7.0 8.0 7.5 3.2 198 chr3L 1848594 intergenic not near genes chr3L 1848693 intergenic not near genes chr3L 1848792 intergenic not near genes chr3L_27_1845001 chr3L_1845001 RAL-109_125b 2004 chr3L 1853001 1853046 chr3L 1853135 1853180 13 133 5.0 6.0 5.5 2.0 179 chr3L 1853001 intron CG13936 - chr3L 1853090 intron CG13936 - chr3L 1853180 intron CG13936 - chr3L_13_1850001 chr3L_1850001 RAL-109_125b 2005 chr3L 1882316 1882382 chr3L 1882462 1882526 15 144 4.5 3.0 3.8 3.1 210 chr3L 1882316 intron CG13937 - chr3L 1882421 intron CG13937 - chr3L 1882526 intron CG13937 - chr3L_15_1880001 chr3L_1880001 RAL-109_125b 2006 chr3L 1922432 1922462 chr3L 1922536 1922570 13 109 15.0 15.5 15.2 0.8 138 chr3L 1922432 intron Dbx + chr3L 1922501 intron Dbx + chr3L 1922570 intron Dbx + chr3L_13_1920001 chr3L_1920001 RAL-109_125b 2007 chr3L 1924918 1924975 chr3L 1925105 1925128 16 185 7.0 6.5 6.8 2.1 210 chr3L 1924918 exon Dbx + chr3L 1925023 intron Dbx + chr3L 1925128 intron Dbx + chr3L_16_1925001 chr3L_1925001 RAL-109_125b 2008 chr3L 1975697 1975772 chr3L 1975826 1975901 25 128 8.5 6.5 7.5 2.9 204 chr3L 1975697 intergenic not near genes chr3L 1975799 intergenic not near genes chr3L 1975901 intergenic not near genes chr3L_25_1975001 chr3L_1975001 RAL-109_125b 2009 chr3L 1984381 1984420 chr3L 1984511 1984560 10 144 29.5 32.0 30.8 0.3 179 chr3L 1984381 intergenic not near genes chr3L 1984470 intergenic not near genes chr3L 1984560 intergenic not near genes chr3L_10_1980001 chr3L_1980001 RAL-109_125b 2010 chr3L 1992974 1992992 chr3L 1993461 1993480 5 488 7.0 12.0 9.5 0.5 506 chr3L 1992974 intergenic not near genes chr3L 1993227 intergenic not near genes chr3L 1993480 intergenic not near genes chr3L_5_1990001 chr3L_1990001 RAL-109_125b 2011 chr3L 1992997 1993043 chr3L 1993455 1993532 10 460 6.0 9.0 7.5 1.2 535 chr3L 1992997 intergenic not near genes chr3L 1993264 intergenic not near genes chr3L 1993532 intergenic not near genes chr3L_10_1990001 chr3L_1990001 RAL-109_125b 2012 chr3L 2025474 2025490 chr3L 2025602 2025619 7 127 14.0 10.0 12.0 0.5 145 chr3L 2025474 intergenic not near genes chr3L 2025546 intergenic not near genes chr3L 2025619 intergenic not near genes chr3L_7_2025001 chr3L_2025001 RAL-109_125b 2013 chr3L 2025491 2025540 chr3L 2025595 2025639 19 116 7.0 10.0 8.5 2.0 148 chr3L 2025491 intergenic not near genes chr3L 2025565 intergenic not near genes chr3L 2025639 intergenic not near genes chr3L_19_2025001 chr3L_2025001 RAL-109_125b 2014 chr3L 2108215 2108277 chr3L 2113469 2113526 copia 20 5253 8.5 11.5 10.0 1.8 5311 chr3L 2108215 intron sls - chr3L 2110870 intron sls - chr3L 2113526 intron sls - chr3L_20_2110001 chr3L_2110001 RAL-109_125b 2015 chr3L 2139160 2139224 chr3L 2139291 2139355 27 129 13.5 5.5 9.5 2.6 195 chr3L 2139160 intron zormin - chr3L 2139258 intron zormin - chr3L 2139355 intron zormin - chr3L_27_2135001 chr3L_2135001 RAL-109_125b 2016 chr3L 2168745 2168800 chr3L 2168873 2168941 26 139 4.0 11.0 7.5 3.1 196 chr3L 2168745 exon CG15879 - chr3L 2168843 intron CG15879 - chr3L 2168941 intron CG15879 - chr3L_26_2165001 chr3L_2165001 RAL-109_125b 2017 chr3L 2199796 2199819 chr3L 2199907 2199945 14 124 5.0 14.0 9.5 1.3 149 chr3L 2199796 intergenic not near genes chr3L 2199870 intergenic not near genes chr3L 2199945 intergenic not near genes chr3L_14_2195001 chr3L_2195001 RAL-109_125b 2018 chr3L 2207292 2207308 chr3L 2207545 2207566 6 259 18.0 10.0 14.0 0.4 274 chr3L 2207292 intergenic not near genes chr3L 2207429 intergenic not near genes chr3L 2207566 intergenic not near genes chr3L_6_2205001 chr3L_2205001 RAL-109_125b 2019 chr3L 2207310 2207357 chr3L 2207539 2207605 10 248 8.0 8.0 8.0 1.1 295 chr3L 2207310 intergenic not near genes chr3L 2207458 intergenic not near genes chr3L 2207605 intergenic not near genes chr3L_10_2205001 chr3L_2205001 RAL-109_125b 2020 chr3L 2282965 2283017 chr3L 2283071 2283143 21 123 6.0 5.0 5.5 3.2 178 chr3L 2282965 5` UTR MsR2 + chr3L 2283054 5` UTR MsR2 + chr3L 2283143 5` UTR MsR2 + chr3L_21_2280001 chr3L_2280001 RAL-109_125b 2021 chr3L 2293808 2293863 chr3L 2293934 2293991 16 126 8.5 5.0 6.8 2.1 183 chr3L 2293808 intron MsR2 + chr3L 2293900 intron MsR2 + chr3L 2293991 intron MsR2 + chr3L_16_2290001 chr3L_2290001 RAL-109_125b 2022 chr3L 2307956 2308027 chr3L 2308112 2308183 23 153 5.5 6.5 6.0 3.3 227 chr3L 2307956 intergenic not near genes chr3L 2308070 intergenic not near genes chr3L 2308183 intergenic not near genes chr3L_23_2305001 chr3L_2305001 RAL-109_125b 2023 chr3L 2324005 2324058 chr3L 2328678 2328743 25 4667 51.0 53.5 52.2 0.5 4738 chr3L 2324005 intron MsR1 + chr3L 2326374 intron MsR1 + chr3L 2328743 intron MsR1 + chr3L_25_2325001 chr3L_2325001 RAL-109_125b 2024 chr3L 2411297 2411337 chr3L 2411427 2411447 13 123 4.5 8.0 6.2 1.8 150 chr3L 2411297 intron CG45186 + chr3L 2411372 intron CG45186 + chr3L 2411447 intron CG45186 + chr3L_13_2410001 chr3L_2410001 RAL-109_125b 2025 chr3L 2447461 2447530 chr3L 2456667 2456725 roo 26 9199 9.5 12.5 11.0 2.2 9264 chr3L 2447461 intron CG45186 + chr3L 2452093 intron CG45186 + chr3L 2456725 intron CG45186 + chr3L_26_2450001 chr3L_2450001 RAL-109_125b 2026 chr3L 2467449 2467486 chr3L 2467596 2467642 6 154 5.0 1.5 3.2 1.4 193 chr3L 2467449 intron CG45186 + chr3L 2467546 intron CG45186 + chr3L 2467642 intron CG45186 + chr3L_6_2465001 chr3L_2465001 RAL-109_125b 2027 chr3L 2480251 2480331 chr3L 2480401 2480480 16 142 4.5 3.5 4.0 3.2 229 chr3L 2480251 intron CG45186 + chr3L 2480366 intron CG45186 + chr3L 2480480 intron CG45186 + chr3L_16_2480001 chr3L_2480001 RAL-109_125b 2028 chr3L 2493776 2493849 chr3L 2493904 2493987 15 137 8.5 0.5 4.5 2.7 211 chr3L 2493776 intron CG45186 + chr3L 2493882 intron CG45186 + chr3L 2493987 intron CG45186 + chr3L_15_2490001 chr3L_2490001 RAL-109_125b 2029 chr3L 2561486 2561558 chr3L 2561613 2561685 31 124 10.5 10.0 10.2 2.8 199 chr3L 2561486 intron msn - chr3L 2561586 intron msn - chr3L 2561685 intron msn - chr3L_31_2560001 chr3L_2560001 RAL-109_125b 2030 chr3L 2575968 2575985 chr3L 2576101 2576118 6 133 16.0 6.5 11.2 0.5 150 chr3L 2575968 intron msn - chr3L 2576043 intron msn - chr3L 2576118 intron msn - chr3L_6_2575001 chr3L_2575001 RAL-109_125b 2031 chr3L 2591861 2591923 chr3L 2592010 2592072 20 148 6.5 8.0 7.2 2.4 211 chr3L 2591861 intron dos + chr3L 2591966 intron dos + chr3L 2592072 intron dos + chr3L_20_2590001 chr3L_2590001 RAL-109_125b 2032 chr3L 2609630 2609649 chr3L 2609756 2609775 6 125 10.5 3.5 7.0 0.8 145 chr3L 2609630 intron Pxn - chr3L 2609702 intron Pxn - chr3L 2609775 intron Pxn - chr3L_6_2605001 chr3L_2605001 RAL-109_125b 2033 chr3L 2680464 2680501 chr3L 2680594 2680631 13 130 13.0 0.0 6.5 1.7 167 chr3L 2680464 intron Fife - chr3L 2680548 intron Fife - chr3L 2680631 intron Fife - chr3L_13_2680001 chr3L_2680001 RAL-109_125b 2034 chr3L 2683932 2683949 chr3L 2684022 2684065 6 108 9.5 5.5 7.5 0.7 133 chr3L 2683932 intron Fife - chr3L 2683998 intron Fife - chr3L 2684065 intron Fife - chr3L_6_2680001 chr3L_2680001 RAL-109_125b 2035 chr3L 2719503 2719558 chr3L 2719655 2719710 16 152 7.0 8.5 7.8 1.8 207 chr3L 2719503 3` UTR Mrtf - chr3L 2719606 3` UTR Mrtf - chr3L 2719710 3` UTR Mrtf - chr3L_16_2715001 chr3L_2715001 RAL-109_125b 2036 chr3L 2729935 2730013 chr3L 2730156 2730179 19 204 6.0 6.0 6.0 2.7 244 chr3L 2729935 intron Mrtf - chr3L 2730057 intron Mrtf - chr3L 2730179 intron Mrtf - chr3L_19_2730001 chr3L_2730001 RAL-109_125b 2037 chr3L 2735196 2735240 chr3L 2735947 2735954 17 746 10.0 4.5 7.2 2.1 758 chr3L 2735196 intron Mrtf - chr3L 2735575 intron Mrtf - chr3L 2735954 intron Mrtf - chr3L_17_2735001 chr3L_2735001 RAL-109_125b 2038 chr3L 2751412 2751456 chr3L 2755757 2755801 F-element 12 4344 10.5 15.5 13.0 0.9 4389 chr3L 2751412 intron Mrtf - chr3L 2753606 intron Mrtf - chr3L 2755801 intron Mrtf - chr3L_12_2750001 chr3L_2750001 RAL-109_125b 2039 chr3L 2795670 2795741 chr3L 2795843 2795913 16 172 6.0 4.0 5.0 2.7 243 chr3L 2795670 intron CG43444 - chr3L 2795792 intron CG43444 - chr3L 2795913 intron CG43444 - chr3L_16_2795001 chr3L_2795001 RAL-109_125b 2040 chr3L 2835837 2835866 chr3L 2835967 2835996 12 127 12.0 8.0 10.0 1.1 159 chr3L 2835837 intron CG43444 - chr3L 2835916 intron CG43444 - chr3L 2835996 intron CG43444 - chr3L_12_2835001 chr3L_2835001 RAL-109_125b 2041 chr3L 2927798 2927861 chr3L 2936125 2936187 Tirant 17 8324 9.0 10.0 9.5 1.6 8389 chr3L 2927798 intron Shab + chr3L 2931992 intron Shab + chr3L 2936187 intron Shab + chr3L_17_2930001 chr3L_2930001 RAL-109_125b 2042 chr3L 2965966 2966034 chr3L 2966098 2966166 32 130 5.5 9.5 7.5 3.8 200 chr3L 2965966 intergenic not near genes chr3L 2966066 intergenic not near genes chr3L 2966166 intergenic not near genes chr3L_32_2965001 chr3L_2965001 RAL-109_125b 2043 chr3L 2966679 2966723 chr3L 2974156 2974193 mdg1 8 7477 7.5 3.5 5.5 1.2 7514 chr3L 2966679 intergenic not near genes chr3L 2970436 intergenic not near genes chr3L 2974193 intergenic not near genes chr3L_8_2970001 chr3L_2970001 RAL-109_125b 2044 chr3L 2987663 2987720 chr3L 2987793 2987821 15 129 5.5 0.0 2.8 3.9 158 chr3L 2987663 intergenic not near genes chr3L 2987742 intergenic not near genes chr3L 2987821 intergenic not near genes chr3L_15_2985001 chr3L_2985001 RAL-109_125b 2045 chr3L 3040300 3040356 chr3L 3042122 3042199 S-element 5 1839 7.0 0.0 3.5 1.1 1899 chr3L 3040300 3` UTR CG2162 + chr3L 3041250 intergenic not near genes chr3L 3042199 intergenic Jafrac2 + chr3L_5_3040001 chr3L_3040001 RAL-109_125b 2046 chr3L 3051710 3051754 chr3L 3051992 3052050 pogo 17 294 12.5 7.5 10.0 1.5 340 chr3L 3051710 3` UTR CG32485 + chr3L 3051880 intergenic CG32485 + chr3L 3052050 intergenic CG32485 +,CG1271 + chr3L_17_3050001 chr3L_3050001 RAL-109_125b 2047 chr3L 3061258 3061313 chr3L 3069866 3069907 Tirant 24 8612 6.5 7.0 6.8 3.1 8649 chr3L 3061258 intron CG32486 - chr3L 3065582 intron CG32486 - chr3L 3069907 intron CG32486 - chr3L_24_3065001 chr3L_3065001 RAL-109_125b 2048 chr3L 3101483 3101489 chr3L 3101615 3101621 5 132 13.5 0.0 6.8 0.6 138 chr3L 3101483 intron Cht7 - chr3L 3101552 intron Cht7 - chr3L 3101621 intron Cht7 - chr3L_5_3100001 chr3L_3100001 RAL-109_125b 2049 chr3L 3124731 3124735 chr3L 3124950 3124954 4 219 15.5 8.0 11.8 0.3 223 chr3L 3124731 intron prominin-like - chr3L 3124842 intron prominin-like - chr3L 3124954 intron prominin-like - chr3L_4_3120001 chr3L_3120001 RAL-109_125b 2050 chr3L 3124736 3124767 chr3L 3124948 3124986 15 217 7.5 8.0 7.8 1.7 250 chr3L 3124736 intron prominin-like - chr3L 3124861 intron prominin-like - chr3L 3124986 intron prominin-like - chr3L_15_3120001 chr3L_3120001 RAL-109_125b 2051 chr3L 3178681 3178691 chr3L 3178814 3178824 4 133 21.0 5.5 13.2 0.3 143 chr3L 3178681 intergenic CG14964 -,Girdin + chr3L 3178752 intergenic CG14964 -,Girdin + chr3L 3178824 intergenic Girdin +,CG14964 - chr3L_4_3175001 chr3L_3175001 RAL-109_125b 2052 chr3L 3178694 3178758 chr3L 3178811 3178884 19 127 7.0 5.5 6.2 2.6 190 chr3L 3178694 intergenic CG14964 -,Girdin + chr3L 3178789 intergenic Girdin +,CG14964 - chr3L 3178884 intergenic Girdin +,CG14964 - chr3L_19_3175001 chr3L_3175001 RAL-109_125b 2053 chr3L 3244321 3244374 chr3L 3244447 3244493 13 125 10.0 1.0 5.5 2.0 172 chr3L 3244321 intergenic CG12078 - chr3L 3244407 intergenic CG12078 -,CR45424 + chr3L 3244493 intergenic CG12078 -,CR45424 + chr3L_13_3240001 chr3L_3240001 RAL-109_125b 2054 chr3L 3259576 3259830 chr3L 3259721 3259980 43 138 4.0 5.0 4.5 7.8 404 chr3L 3259576 intron ckd + chr3L 3259778 intron ckd + chr3L 3259980 intron ckd + chr3L_43_3255001 chr3L_3255001 RAL-109_125b 2055 chr3L 3269057 3269091 chr3L 3269198 3269232 12 139 2.0 5.0 3.5 2.7 175 chr3L 3269057 intergenic CG34265 + chr3L 3269144 intergenic CG34265 + chr3L 3269232 intergenic CG34265 + chr3L_12_3265001 chr3L_3265001 RAL-109_125b 2056 chr3L 3281393 3281461 chr3L 3281938 3282002 Doc 16 541 13.0 8.0 10.5 1.4 609 chr3L 3281393 intron CG12017 + chr3L 3281698 intron CG12017 + chr3L 3282002 intron CG12017 + chr3L_16_3280001 chr3L_3280001 RAL-109_125b 2057 chr3L 3317505 3317510 chr3L 3317634 3317639 4 129 1.5 10.5 6.0 0.6 134 chr3L 3317505 intergenic Drsl5 + chr3L 3317572 intergenic Drsl5 +,PIG-C - chr3L 3317639 intergenic PIG-C -,Drsl5 + chr3L_4_3315001 chr3L_3315001 RAL-109_125b 2058 chr3L 3317516 3317558 chr3L 3317614 3317687 20 125 0.5 7.5 4.0 4.0 171 chr3L 3317516 intergenic Drsl5 + chr3L 3317602 intergenic PIG-C -,Drsl5 + chr3L 3317687 intergenic PIG-C - chr3L_20_3315001 chr3L_3315001 RAL-109_125b 2059 chr3L 3388547 3388587 chr3L 3388679 3388730 11 132 10.0 10.0 10.0 1.0 183 chr3L 3388547 intergenic not near genes chr3L 3388638 intergenic not near genes chr3L 3388730 intergenic not near genes chr3L_11_3385001 chr3L_3385001 RAL-109_125b 2060 chr3L 3388591 3388612 chr3L 3388674 3388755 10 118 6.5 9.5 8.0 1.1 164 chr3L 3388591 intergenic not near genes chr3L 3388673 intergenic not near genes chr3L 3388755 intergenic not near genes chr3L_10_3385001 chr3L_3385001 RAL-109_125b 2061 chr3L 3436243 3436315 chr3L 3436372 3436444 26 129 4.0 8.5 6.2 3.6 201 chr3L 3436243 intron eIF5B - chr3L 3436344 intron eIF5B - chr3L 3436444 intron eIF5B - chr3L_26_3435001 chr3L_3435001 RAL-109_125b 2062 chr3L 3449215 3449235 chr3L 3449343 3449357 10 126 8.5 5.0 6.8 1.3 142 chr3L 3449215 intron eIF5B - chr3L 3449286 intron eIF5B - chr3L 3449357 intron eIF5B - chr3L_10_3445001 chr3L_3445001 RAL-109_125b 2063 chr3L 3475036 3475058 chr3L 3475530 3475534 jockey 8 490 19.0 7.0 13.0 0.6 498 chr3L 3475036 intron CG42324 + chr3L 3475285 intron CG42324 + chr3L 3475534 intron CG42324 + chr3L_8_3475001 chr3L_3475001 RAL-109_125b 2064 chr3L 3475083 3475094 chr3L 3475518 3475559 jockey 4 462 12.5 5.0 8.8 0.4 476 chr3L 3475083 intron CG42324 + chr3L 3475321 intron CG42324 + chr3L 3475559 intron CG42324 + chr3L_4_3475001 chr3L_3475001 RAL-109_125b 2065 chr3L 3494147 3494201 chr3L 3494274 3494328 27 127 0.0 7.5 3.8 5.6 181 chr3L 3494147 intron CG42324 + chr3L 3494238 intron CG42324 + chr3L 3494328 intron CG42324 + chr3L_27_3490001 chr3L_3490001 RAL-109_125b 2066 chr3L 3494754 3494764 chr3L 3494882 3494892 8 127 13.0 13.5 13.2 0.6 138 chr3L 3494754 intron CG42324 + chr3L 3494823 intron CG42324 + chr3L 3494892 intron CG42324 + chr3L_8_3490001 chr3L_3490001 RAL-109_125b 2067 chr3L 3503967 3503986 chr3L 3504125 3504144 6 158 0.0 13.5 6.8 0.8 177 chr3L 3503967 intron CG42324 + chr3L 3504056 intron CG42324 + chr3L 3504144 intron CG42324 + chr3L_6_3500001 chr3L_3500001 RAL-109_125b 2068 chr3L 3512919 3512924 chr3L 3513049 3513054 4 130 15.5 7.5 11.5 0.3 135 chr3L 3512919 intergenic ImpE2 - chr3L 3512986 intergenic ImpE2 - chr3L 3513054 intergenic ImpE2 - chr3L_4_3510001 chr3L_3510001 RAL-109_125b 2069 chr3L 3512925 3512978 chr3L 3513041 3513108 11 128 6.5 6.5 6.5 1.5 183 chr3L 3512925 intergenic ImpE2 - chr3L 3513016 intergenic ImpE2 - chr3L 3513108 intergenic ImpE2 - chr3L_11_3510001 chr3L_3510001 RAL-109_125b 2070 chr3L 3530666 3530733 chr3L 3530794 3530861 17 126 7.0 4.0 5.5 2.6 195 chr3L 3530666 intron Eip63E + chr3L 3530764 intron Eip63E + chr3L 3530861 intron Eip63E + chr3L_17_3530001 chr3L_3530001 RAL-109_125b 2071 chr3L 3577686 3577758 chr3L 3577814 3577879 25 125 7.5 5.0 6.2 3.5 193 chr3L 3577686 intron Eip63E + chr3L 3577782 intron Eip63E + chr3L 3577879 intron Eip63E + chr3L_25_3575001 chr3L_3575001 RAL-109_125b 2072 chr3L 3581700 3581777 chr3L 3581832 3581868 17 131 6.0 0.0 3.0 4.2 168 chr3L 3581700 intron Eip63E + chr3L 3581784 intron Eip63E + chr3L 3581868 intron Eip63E + chr3L_17_3580001 chr3L_3580001 RAL-109_125b 2073 chr3L 3601271 3601328 chr3L 3606617 3606687 copia 19 5359 7.5 10.0 8.8 1.9 5416 chr3L 3601271 intron Eip63E + chr3L 3603979 intron Eip63E + chr3L 3606687 intron Eip63E + chr3L_19_3600001 chr3L_3600001 RAL-109_125b 2074 chr3L 3627188 3627259 chr3L 3627343 3627414 20 155 4.0 5.0 4.5 3.6 226 chr3L 3627188 intron dar1 + chr3L 3627301 intron dar1 + chr3L 3627414 intron dar1 + chr3L_20_3625001 chr3L_3625001 RAL-109_125b 2075 chr3L 3763709 3763754 chr3L 3763840 3763840 7 123 6.0 0.5 3.2 1.7 131 chr3L 3763709 intron CG32264 - chr3L 3763774 intron CG32264 - chr3L 3763840 intron CG32264 - chr3L_7_3760001 chr3L_3760001 RAL-109_125b 2076 chr3L 3766692 3766751 chr3L 3766828 3766880 11 134 11.0 2.5 6.8 1.4 188 chr3L 3766692 intron CG32264 - chr3L 3766786 intron CG32264 - chr3L 3766880 intron CG32264 - chr3L_11_3765001 chr3L_3765001 RAL-109_125b 2077 chr3L 3771894 3771925 chr3L 3772022 3772050 10 124 8.5 8.5 8.5 1.1 156 chr3L 3771894 intron CG32264 - chr3L 3771972 intron CG32264 - chr3L 3772050 intron CG32264 - chr3L_10_3770001 chr3L_3770001 RAL-109_125b 2078 chr3L 3783228 3783287 chr3L 3783355 3783414 12 126 6.5 9.0 7.8 1.4 186 chr3L 3783228 intron CG32264 - chr3L 3783321 intron CG32264 - chr3L 3783414 intron CG32264 - chr3L_12_3780001 chr3L_3780001 RAL-109_125b 2079 chr3L 3797193 3797265 chr3L 3797326 3797398 16 133 0.0 6.5 3.2 3.8 205 chr3L 3797193 intron CG32264 - chr3L 3797296 intron CG32264 - chr3L 3797398 intron CG32264 - chr3L_16_3795001 chr3L_3795001 RAL-109_125b 2080 chr3L 3833691 3833757 chr3L 3833982 3834037 pogo 15 289 6.5 4.0 5.2 2.4 346 chr3L 3833691 intron enc + chr3L 3833864 intron enc + chr3L 3834037 intron enc + chr3L_15_3830001 chr3L_3830001 RAL-109_125b 2081 chr3L 3876576 3876615 chr3L 3876742 3876781 17 164 10.5 9.0 9.8 1.6 205 chr3L 3876576 intergenic not near genes chr3L 3876678 intergenic not near genes chr3L 3876781 intergenic not near genes chr3L_17_3875001 chr3L_3875001 RAL-109_125b 2082 chr3L 3877417 3877468 chr3L 3877590 3877641 11 169 0.0 8.5 4.2 2.1 224 chr3L 3877417 intergenic not near genes chr3L 3877529 intergenic not near genes chr3L 3877641 intergenic not near genes chr3L_11_3875001 chr3L_3875001 RAL-109_125b 2083 chr3L 3914990 3915048 chr3L 3915117 3915175 21 126 4.0 6.0 5.0 3.5 185 chr3L 3914990 intron Eip63F-1 - chr3L 3915082 intron Eip63F-1 - chr3L 3915175 intron Eip63F-1 - chr3L_21_3915001 chr3L_3915001 RAL-109_125b 2084 chr3L 3925959 3926039 chr3L 3926100 3926182 12 142 4.5 0.5 2.5 3.4 223 chr3L 3925959 intron Eip63F-1 - chr3L 3926070 intron Eip63F-1 - chr3L 3926182 intron Eip63F-1 - chr3L_12_3925001 chr3L_3925001 RAL-109_125b 2085 chr3L 3953516 3953552 chr3L 3953906 3953942 19 389 18.5 7.5 13.0 1.4 426 chr3L 3953516 intergenic not near genes chr3L 3953729 intergenic not near genes chr3L 3953942 intergenic CG12605 - chr3L_19_3950001 chr3L_3950001 RAL-109_125b 2086 chr3L 3953553 3953586 chr3L 3953902 3953976 19 384 9.5 7.0 8.2 2.1 423 chr3L 3953553 intergenic not near genes chr3L 3953764 intergenic CG12605 - chr3L 3953976 intergenic CG12605 - chr3L_19_3950001 chr3L_3950001 RAL-109_125b 2087 chr3L 4099432 4099493 chr3L 4099563 4099622 25 131 5.5 1.0 3.2 6.0 190 chr3L 4099432 intron CG14995 - chr3L 4099527 intron CG14995 - chr3L 4099622 intron CG14995 - chr3L_25_4095001 chr3L_4095001 RAL-109_125b 2088 chr3L 4187281 4187350 chr3L 4187494 4187563 26 210 6.0 8.0 7.0 3.2 282 chr3L 4187281 intron,intron CG18675 +,Teh2 - chr3L 4187422 intron,intron CG18675 +,Teh2 - chr3L 4187563 intron,intron CG18675 +,Teh2 - chr3L_26_4185001 chr3L_4185001 RAL-109_125b 2089 chr3L 4214490 4214545 chr3L 4214682 4214737 23 189 7.5 9.5 8.5 2.4 247 chr3L 4214490 intron CG43367 + chr3L 4214614 intron CG43367 + chr3L 4214737 intron CG43367 + chr3L_23_4210001 chr3L_4210001 RAL-109_125b 2090 chr3L 4328705 4328758 chr3L 4336253 4336306 412 11 7546 1.5 9.0 5.2 1.8 7601 chr3L 4328705 intron Cip4 - chr3L 4332506 intron Cip4 - chr3L 4336306 exon Cip4 - chr3L_11_4330001 chr3L_4330001 RAL-109_125b 2091 chr3L 4341330 4341335 chr3L 21448026 21448026 7 17106693 33.5 33.5 33.5 0.2 17106696 chr3L 4341330 intron Cip4 - chr3L 12894678 3` UTR CG14118 + chr3L 21448026 3` UTR Syx7 + chr3L_7_12890001 chr3L_12890001 RAL-109_125b 2092 chr3L 4361016 4361023 chr3L 4362922 4362929 6 1906 0.0 13.5 6.8 0.8 1913 chr3L 4361016 intron Cip4 - chr3L 4361972 intron Cip4 - chr3L 4362929 intron Cip4 - chr3L_6_4360001 chr3L_4360001 RAL-109_125b 2093 chr3L 4500715 4500721 chr3L 4501329 4501335 5 614 12.5 3.0 7.8 0.6 620 chr3L 4500715 intergenic CG13720 - chr3L 4501025 intergenic not near genes chr3L 4501335 intergenic NT1 - chr3L_5_4500001 chr3L_4500001 RAL-109_125b 2094 chr3L 4604824 4604840 chr3L 4604977 4604981 14 156 19.0 7.5 13.2 1.0 157 chr3L 4604824 intron Src64B - chr3L 4604902 intron Src64B - chr3L 4604981 intron Src64B - chr3L_14_4600001 chr3L_4600001 RAL-109_125b 2095 chr3L 4604845 4604890 chr3L 4604976 4605051 20 154 8.5 6.5 7.5 2.4 206 chr3L 4604845 intron Src64B - chr3L 4604948 intron Src64B - chr3L 4605051 intron Src64B - chr3L_20_4600001 chr3L_4600001 RAL-109_125b 2096 chr3L 4607217 4607292 chr3L 4607358 4607433 21 140 5.0 8.0 6.5 2.8 216 chr3L 4607217 intron Src64B - chr3L 4607325 intron Src64B - chr3L 4607433 intron Src64B - chr3L_21_4605001 chr3L_4605001 RAL-109_125b 2097 chr3L 4636413 4636449 chr3L 4636545 4636581 12 129 1.5 10.0 5.8 1.8 168 chr3L 4636413 intron axo - chr3L 4636497 intron axo - chr3L 4636581 intron axo - chr3L_12_4635001 chr3L_4635001 RAL-109_125b 2098 chr3L 4675987 4676019 chr3L 4676118 4676150 13 131 8.0 7.5 7.8 1.5 163 chr3L 4675987 intron axo - chr3L 4676068 intron axo - chr3L 4676150 intron axo - chr3L_13_4675001 chr3L_4675001 RAL-109_125b 2099 chr3L 4726388 4726458 chr3L 4726519 4726589 30 128 6.0 8.0 7.0 3.8 201 chr3L 4726388 intron RhoGEF64C + chr3L 4726488 intron RhoGEF64C + chr3L 4726589 intron RhoGEF64C + chr3L_30_4725001 chr3L_4725001 RAL-109_125b 2100 chr3L 4761519 4761593 chr3L 4761699 4761720 24 174 3.5 5.5 4.5 4.4 201 chr3L 4761519 intron RhoGEF64C + chr3L 4761620 intron RhoGEF64C + chr3L 4761720 intron RhoGEF64C + chr3L_24_4760001 chr3L_4760001 RAL-109_125b 2101 chr3L 4782054 4782124 chr3L 4782204 4782274 33 146 7.5 6.5 7.0 4.1 220 chr3L 4782054 intron RhoGEF64C + chr3L 4782164 intron RhoGEF64C + chr3L 4782274 intron RhoGEF64C + chr3L_33_4780001 chr3L_4780001 RAL-109_125b 2102 chr3L 4837842 4837916 chr3L 4837971 4838045 26 126 6.5 8.0 7.2 3.2 203 chr3L 4837842 3` UTR CG13707 - chr3L 4837944 3` UTR CG13707 - chr3L 4838045 3` UTR CG13707 - chr3L_26_4835001 chr3L_4835001 RAL-109_125b 2103 chr3L 4839501 4839572 chr3L 4839627 4839697 27 124 7.5 8.0 7.8 3.1 196 chr3L 4839501 intron CG13707 - chr3L 4839599 intron CG13707 - chr3L 4839697 intron CG13707 - chr3L_27_4835001 chr3L_4835001 RAL-109_125b 2104 chr3L 4862069 4862116 chr3L 4862194 4862248 12 122 5.5 8.5 7.0 1.5 179 chr3L 4862069 intron CG17150 + chr3L 4862158 intron CG17150 + chr3L 4862248 intron CG17150 + chr3L_12_4860001 chr3L_4860001 RAL-109_125b 2105 chr3L 4901091 4901153 chr3L 4907331 4907393 diver 12 6237 7.5 5.5 6.5 1.6 6302 chr3L 4901091 intergenic CG13704 + chr3L 4904242 intergenic not near genes chr3L 4907393 intergenic not near genes chr3L_12_4900001 chr3L_4900001 RAL-109_125b 2106 chr3L 4914503 4914553 chr3L 4914773 4914818 14 268 8.0 4.5 6.2 1.9 315 chr3L 4914503 intron Rh50 + chr3L 4914660 intron Rh50 + chr3L 4914818 intron Rh50 + chr3L_14_4910001 chr3L_4910001 RAL-109_125b 2107 chr3L 4914554 4914565 chr3L 4914762 4914835 7 252 5.0 2.5 3.8 1.5 281 chr3L 4914554 intron Rh50 + chr3L 4914694 intron Rh50 + chr3L 4914835 intron Rh50 + chr3L_7_4910001 chr3L_4910001 RAL-109_125b 2108 chr3L 4967102 4967170 chr3L 4967259 4967327 19 154 5.5 6.0 5.8 2.8 225 chr3L 4967102 intron Con - chr3L 4967214 intron Con - chr3L 4967327 intron Con - chr3L_19_4965001 chr3L_4965001 RAL-109_125b 2109 chr3L 5013797 5013824 chr3L 5013922 5013944 13 128 13.0 14.5 13.8 0.9 147 chr3L 5013797 intron Con - chr3L 5013870 intron Con - chr3L 5013944 intron Con - chr3L_13_5010001 chr3L_5010001 RAL-109_125b 2110 chr3L 5013826 5013833 chr3L 5013917 5013965 4 111 11.0 12.0 11.5 0.3 139 chr3L 5013826 intron Con - chr3L 5013896 intron Con - chr3L 5013965 intron Con - chr3L_4_5010001 chr3L_5010001 RAL-109_125b 2111 chr3L 5034132 5034182 chr3L 5043313 5043384 roo 8 9197 6.0 0.0 3.0 2.0 9252 chr3L 5034132 intron Con - chr3L 5038758 intron Con - chr3L 5043384 intron Con - chr3L_8_5035001 chr3L_5035001 RAL-109_125b 2112 chr3L 5045413 5045477 chr3L 5050244 5050307 Doc 18 4829 7.0 6.0 6.5 2.4 4894 chr3L 5045413 5` UTR Con - chr3L 5047860 intron Con - chr3L 5050307 intron Con - chr3L_18_5045001 chr3L_5045001 RAL-109_125b 2113 chr3L 5080937 5080945 chr3L 5081067 5081075 4 130 7.0 0.0 3.5 0.9 138 chr3L 5080937 intergenic not near genes chr3L 5081006 intergenic not near genes chr3L 5081075 intergenic not near genes chr3L_4_5080001 chr3L_5080001 RAL-109_125b 2114 chr3L 5104434 5104505 chr3L 5124617 5124689 30 20183 6.5 12.0 9.2 2.9 20255 chr3L 5104434 intergenic not near genes chr3L 5114562 intergenic not near genes chr3L 5124689 intergenic not near genes chr3L_30_5110001 chr3L_5110001 RAL-109_125b 2115 chr3L 5164590 5164641 chr3L 5164716 5164767 13 126 10.5 5.0 7.8 1.5 177 chr3L 5164590 intron shep - chr3L 5164678 intron shep - chr3L 5164767 intron shep - chr3L_13_5160001 chr3L_5160001 RAL-109_125b 2116 chr3L 5223397 5223408 chr3L 5223506 5223540 4 126 13.0 10.5 11.8 0.3 143 chr3L 5223397 intron shep - chr3L 5223468 intron shep - chr3L 5223540 intron shep - chr3L_4_5220001 chr3L_5220001 RAL-109_125b 2117 chr3L 5223411 5223447 chr3L 5223500 5223579 9 120 8.5 9.5 9.0 0.9 168 chr3L 5223411 intron shep - chr3L 5223495 intron shep - chr3L 5223579 intron shep - chr3L_9_5220001 chr3L_5220001 RAL-109_125b 2118 chr3L 5261121 5261177 chr3L 5261245 5261305 11 128 10.0 6.5 8.2 1.2 184 chr3L 5261121 intron shep - chr3L 5261213 intron shep - chr3L 5261305 intron shep - chr3L_11_5260001 chr3L_5260001 RAL-109_125b 2119 chr3L 5265303 5265373 chr3L 5265461 5265515 34 150 8.0 8.5 8.2 3.7 212 chr3L 5265303 intron shep - chr3L 5265409 intron shep - chr3L 5265515 intron shep - chr3L_34_5265001 chr3L_5265001 RAL-109_125b 2120 chr3L 5271152 5271170 chr3L 5271280 5271293 6 127 0.5 0.5 0.5 4.0 141 chr3L 5271152 intron shep - chr3L 5271222 intron shep - chr3L 5271293 intron shep - chr3L_6_5270001 chr3L_5270001 RAL-109_125b 2121 chr3L 5280086 5280119 chr3L 5280278 5280311 10 192 1.5 2.0 1.8 3.6 225 chr3L 5280086 intergenic not near genes chr3L 5280198 intergenic not near genes chr3L 5280311 intergenic not near genes chr3L_10_5280001 chr3L_5280001 RAL-109_125b 2122 chr3L 5356398 5356406 chr3L 5356525 5356533 4 127 7.5 5.5 6.5 0.5 135 chr3L 5356398 intergenic Klp64D -,lama - chr3L 5356466 intergenic Klp64D - chr3L 5356533 intergenic Klp64D - chr3L_4_5355001 chr3L_5355001 RAL-109_125b 2123 chr3L 5375991 5376038 chr3L 5376120 5376167 24 128 3.0 8.0 5.5 3.7 176 chr3L 5375991 intergenic not near genes chr3L 5376079 intergenic not near genes chr3L 5376167 intergenic not near genes chr3L_24_5375001 chr3L_5375001 RAL-109_125b 2124 chr3L 5393424 5393474 chr3L 5393636 5393686 5 212 6.0 4.0 5.0 0.8 262 chr3L 5393424 intergenic not near genes chr3L 5393555 intergenic not near genes chr3L 5393686 intergenic not near genes chr3L_5_5390001 chr3L_5390001 RAL-109_125b 2125 chr3L 5396418 5396439 chr3L 5396554 5396575 12 136 2.0 0.0 1.0 6.0 157 chr3L 5396418 intergenic not near genes chr3L 5396496 intergenic not near genes chr3L 5396575 intergenic not near genes chr3L_12_5395001 chr3L_5395001 RAL-109_125b 2126 chr3L 5399541 5399575 chr3L 5399678 5399711 5 137 0.0 9.5 4.8 0.9 170 chr3L 5399541 intergenic not near genes chr3L 5399626 intergenic not near genes chr3L 5399711 intergenic not near genes chr3L_5_5395001 chr3L_5395001 RAL-109_125b 2127 chr3L 5444972 5445022 chr3L 5445324 5445397 21 372 0.5 2.5 1.5 8.4 425 chr3L 5444972 intergenic not near genes chr3L 5445184 intergenic not near genes chr3L 5445397 intergenic not near genes chr3L_21_5445001 chr3L_5445001 RAL-109_125b 2128 chr3L 5458068 5458087 chr3L 5466713 5466729 Max-element 5 8648 4.5 16.0 10.2 0.4 8661 chr3L 5458068 intergenic not near genes chr3L 5462398 intergenic not near genes chr3L 5466729 intergenic not near genes chr3L_5_5460001 chr3L_5460001 RAL-109_125b 2129 chr3L 5476139 5476149 chr3L 5476271 5476281 6 132 5.5 9.5 7.5 0.7 142 chr3L 5476139 intergenic not near genes chr3L 5476210 intergenic not near genes chr3L 5476281 intergenic not near genes chr3L_6_5475001 chr3L_5475001 RAL-109_125b 2130 chr3L 5476155 5476204 chr3L 5476267 5476335 15 128 5.0 9.0 7.0 1.9 180 chr3L 5476155 intergenic not near genes chr3L 5476245 intergenic not near genes chr3L 5476335 intergenic not near genes chr3L_15_5475001 chr3L_5475001 RAL-109_125b 2131 chr3L 5483069 5483084 chr3L 5483193 5483202 5 127 0.5 16.0 8.2 0.5 133 chr3L 5483069 exon CG4835 + chr3L 5483136 exon CG4835 + chr3L 5483202 exon CG4835 + chr3L_5_5480001 chr3L_5480001 RAL-109_125b 2132 chr3L 5498343 5498431 chr3L 5498476 5498493 12 123 2.0 6.5 4.2 2.3 150 chr3L 5498343 exon blanks - chr3L 5498418 exon blanks - chr3L 5498493 exon blanks - chr3L_12_5495001 chr3L_5495001 RAL-109_125b 2133 chr3L 5516375 5516401 chr3L 5516520 5516546 4 145 15.0 4.5 9.8 0.4 171 chr3L 5516375 intron Lkr - chr3L 5516460 intron Lkr - chr3L 5516546 intron Lkr - chr3L_4_5515001 chr3L_5515001 RAL-109_125b 2134 chr3L 5516405 5516440 chr3L 5516519 5516575 11 135 7.5 4.5 6.0 1.6 170 chr3L 5516405 intron Lkr - chr3L 5516490 intron Lkr - chr3L 5516575 intron Lkr - chr3L_11_5515001 chr3L_5515001 RAL-109_125b 2135 chr3L 5537677 5537744 chr3L 5538069 5538136 jockey 22 388 7.0 8.5 7.8 2.5 459 chr3L 5537677 intergenic not near genes chr3L 5537906 intergenic not near genes chr3L 5538136 intergenic CG10625 - chr3L_22_5535001 chr3L_5535001 RAL-109_125b 2136 chr3L 5572131 5572157 chr3L 5572248 5572281 9 126 8.0 10.5 9.2 0.9 150 chr3L 5572131 intron Msr-110 - chr3L 5572206 intron Msr-110 - chr3L 5572281 intron Msr-110 - chr3L_9_5570001 chr3L_5570001 RAL-109_125b 2137 chr3L 5613447 5613500 chr3L 5613624 5613677 12 177 8.0 5.5 6.8 1.5 230 chr3L 5613447 intergenic not near genes chr3L 5613562 intergenic not near genes chr3L 5613677 intergenic not near genes chr3L_12_5610001 chr3L_5610001 RAL-109_125b 2138 chr3L 5666267 5666318 chr3L 5666401 5666452 7 133 0.0 11.5 5.8 1.0 185 chr3L 5666267 intron sif + chr3L 5666360 intron sif + chr3L 5666452 intron sif + chr3L_7_5665001 chr3L_5665001 RAL-109_125b 2139 chr3L 5667579 5667654 chr3L 5667709 5667784 23 130 5.0 5.5 5.2 3.7 205 chr3L 5667579 intron sif + chr3L 5667682 intron sif + chr3L 5667784 intron sif + chr3L_23_5665001 chr3L_5665001 RAL-109_125b 2140 chr3L 5677154 5677206 chr3L 5677280 5677332 20 124 1.5 8.0 4.8 3.4 178 chr3L 5677154 intron sif + chr3L 5677243 intron sif + chr3L 5677332 intron sif + chr3L_20_5675001 chr3L_5675001 RAL-109_125b 2141 chr3L 5784512 5784548 chr3L 5784652 5784688 8 140 9.5 4.5 7.0 1.0 176 chr3L 5784512 3` UTR,3` UTR,5` UTR PGRP-LD +,Pmi +,Cralbp - chr3L 5784600 3` UTR,3` UTR,intron PGRP-LD +,Pmi +,Cralbp - chr3L 5784688 intron Cralbp - chr3L_8_5780001 chr3L_5780001 RAL-109_125b 2142 chr3L 5909988 5910055 chr3L 5910279 5910336 pogo 22 289 6.0 6.0 6.0 3.1 348 chr3L 5909988 intron CG13288 + chr3L 5910162 intron CG13288 + chr3L 5910336 intron CG13288 + chr3L_22_5910001 chr3L_5910001 RAL-109_125b 2143 chr3L 5926273 5926316 chr3L 5926513 5926554 BS 19 237 15.0 7.5 11.2 1.6 281 chr3L 5926273 intron Vap-33B + chr3L 5926414 intron Vap-33B + chr3L 5926554 intron Vap-33B + chr3L_19_5925001 chr3L_5925001 RAL-109_125b 2144 chr3L 5980541 5980560 chr3L 5980678 5980697 11 136 16.0 11.0 13.5 0.8 156 chr3L 5980541 intergenic not near genes chr3L 5980619 intergenic not near genes chr3L 5980697 intergenic not near genes chr3L_11_5980001 chr3L_5980001 RAL-109_125b 2145 chr3L 5980564 5980613 chr3L 5980675 5980740 16 127 6.0 10.0 8.0 1.8 176 chr3L 5980564 intergenic not near genes chr3L 5980652 intergenic not near genes chr3L 5980740 intergenic not near genes chr3L_16_5980001 chr3L_5980001 RAL-109_125b 2146 chr3L 5992573 5992581 chr3L 5992724 5992733 8 152 12.0 12.5 12.2 0.6 160 chr3L 5992573 intergenic not near genes chr3L 5992653 intergenic not near genes chr3L 5992733 intergenic not near genes chr3L_8_5990001 chr3L_5990001 RAL-109_125b 2147 chr3L 5992584 5992619 chr3L 5992706 5992771 11 149 7.0 8.0 7.5 1.3 187 chr3L 5992584 intergenic not near genes chr3L 5992678 intergenic not near genes chr3L 5992771 intergenic not near genes chr3L_11_5990001 chr3L_5990001 RAL-109_125b 2148 chr3L 6001649 6001717 chr3L 6004385 6004467 jockey 17 2748 8.5 0.0 4.2 3.3 2818 chr3L 6001649 intron PVRAP + chr3L 6003058 intron PVRAP + chr3L 6004467 intron PVRAP + chr3L_17_6000001 chr3L_6000001 RAL-109_125b 2149 chr3L 6036300 6036371 chr3L 6036553 6036624 21 250 5.0 6.5 5.8 3.1 324 chr3L 6036300 intergenic yip7 +,CR43952 + chr3L 6036462 intergenic CR43952 +,yip7 + chr3L 6036624 5` UTR CR43952 + chr3L_21_6035001 chr3L_6035001 RAL-109_125b 2150 chr3L 6040327 6040356 chr3L 6042733 6042761 Doc 6 2404 13.5 11.5 12.5 0.4 2434 chr3L 6040327 intergenic Jon65Aiv + chr3L 6041544 intergenic not near genes chr3L 6042761 intergenic not near genes chr3L_6_6040001 chr3L_6040001 RAL-109_125b 2151 chr3L 6040357 6040388 chr3L 6042729 6042769 Doc 9 2395 6.5 10.5 8.5 0.9 2412 chr3L 6040357 intergenic Jon65Aiv + chr3L 6041563 intergenic not near genes chr3L 6042769 intergenic not near genes chr3L_9_6040001 chr3L_6040001 RAL-109_125b 2152 chr3L 6049239 6049249 chr3L 6049390 6049400 4 152 39.5 54.0 46.8 0.1 161 chr3L 6049239 intergenic not near genes chr3L 6049320 intergenic not near genes chr3L 6049400 intergenic not near genes chr3L_4_6045001 chr3L_6045001 RAL-109_125b 2153 chr3L 6049237 6049314 chr3L 6049406 6049465 25 155 52.5 51.5 52.0 0.5 228 chr3L 6049237 intergenic not near genes chr3L 6049351 intergenic not near genes chr3L 6049465 intergenic not near genes chr3L_25_6045001 chr3L_6045001 RAL-109_125b 2154 chr3L 6052615 6052645 chr3L 6052750 6052780 8 129 13.0 9.5 11.2 0.7 165 chr3L 6052615 exon Jon65Aii + chr3L 6052698 intron Jon65Aii + chr3L 6052780 exon Jon65Aii + chr3L_8_6050001 chr3L_6050001 RAL-109_125b 2155 chr3L 6052646 6052675 chr3L 6052739 6052743 6 98 13.5 9.5 11.5 0.5 97 chr3L 6052646 exon Jon65Aii + chr3L 6052694 intron Jon65Aii + chr3L 6052743 exon Jon65Aii + chr3L_6_6050001 chr3L_6050001 RAL-109_125b 2156 chr3L 2182154 2182157 chr3L 6061839 6061842 4 3879685 19.0 11.0 15.0 0.2 3879688 chr3L 2182154 intergenic not near genes chr3L 4121998 intron Chd64 - chr3L 6061842 intron CG10472 - chr3L_4_4120001 chr3L_4120001 RAL-109_125b 2157 chr3L 6063899 6063927 chr3L 6064033 6064061 13 134 17.0 7.0 12.0 1.0 162 chr3L 6063899 intergenic not near genes chr3L 6063980 intergenic not near genes chr3L 6064061 intergenic not near genes chr3L_13_6060001 chr3L_6060001 RAL-109_125b 2158 chr3L 6063929 6063966 chr3L 6064026 6064100 17 130 6.5 6.0 6.2 2.4 171 chr3L 6063929 intergenic not near genes chr3L 6064014 intergenic not near genes chr3L 6064100 intergenic not near genes chr3L_17_6060001 chr3L_6060001 RAL-109_125b 2159 chr3L 6064963 6065042 chr3L 6065090 6065169 18 126 5.0 3.5 4.2 3.5 206 chr3L 6064963 intergenic not near genes chr3L 6065066 intergenic not near genes chr3L 6065169 intergenic not near genes chr3L_18_6065001 chr3L_6065001 RAL-109_125b 2160 chr3L 6119135 6119172 chr3L 6119262 6119299 10 127 6.0 13.5 9.8 0.9 164 chr3L 6119135 exon Ets65A + chr3L 6119217 intron Ets65A + chr3L 6119299 intron Ets65A + chr3L_10_6115001 chr3L_6115001 RAL-109_125b 2161 chr3L 6124350 6124360 chr3L 6124507 6124507 5 155 5.5 15.5 10.5 0.4 157 chr3L 6124350 exon l(3)mbn - chr3L 6124428 exon l(3)mbn - chr3L 6124507 exon l(3)mbn - chr3L_5_6120001 chr3L_6120001 RAL-109_125b 2162 chr3L 6155671 6155701 chr3L 6155807 6155837 13 136 8.5 0.0 4.2 2.5 166 chr3L 6155671 intergenic CR45421 - chr3L 6155754 intergenic not near genes chr3L 6155837 intergenic not near genes chr3L_13_6155001 chr3L_6155001 RAL-109_125b 2163 chr3L 6162356 6162385 chr3L 6162449 6162476 5 108 1.5 5.5 3.5 1.1 120 chr3L 6162356 intergenic CR45744 - chr3L 6162416 intergenic CR45744 - chr3L 6162476 intergenic CR45744 - chr3L_5_6160001 chr3L_6160001 RAL-109_125b 2164 chr3L 6220874 6220941 chr3L 6230076 6230143 roo 28 9198 9.0 7.5 8.2 3.0 9269 chr3L 6220874 5` UTR pncr008:3L + chr3L 6225508 intergenic not near genes chr3L 6230143 intergenic not near genes chr3L_28_6225001 chr3L_6225001 RAL-109_125b 2165 chr3L 6383732 6383807 chr3L 6385876 6385926 14 2139 7.5 2.5 5.0 2.3 2194 chr3L 6383732 intergenic not near genes chr3L 6384829 intergenic not near genes chr3L 6385926 intergenic not near genes chr3L_14_6380001 chr3L_6380001 RAL-109_125b 2166 chr3L 6405618 6405679 chr3L 6432132 6432193 roo 17 26513 6.5 12.5 9.5 1.6 26575 chr3L 6405618 intron CG42747 + chr3L 6418906 intron CG42747 + chr3L 6432193 intron CG42747 + chr3L_17_6415001 chr3L_6415001 RAL-109_125b 2167 chr3L 6486496 6486539 chr3L 6486634 6486677 18 138 12.0 15.5 13.8 1.2 181 chr3L 6486496 3` UTR CG10147 - chr3L 6486586 3` UTR CG10147 - chr3L 6486677 3` UTR CG10147 - chr3L_18_6485001 chr3L_6485001 RAL-109_125b 2168 chr3L 6529623 6529643 chr3L 6529754 6529775 8 132 13.5 8.0 10.8 0.7 152 chr3L 6529623 intron sfl + chr3L 6529699 intron sfl + chr3L 6529775 intron sfl + chr3L_8_6525001 chr3L_6525001 RAL-109_125b 2169 chr3L 6529648 6529676 chr3L 6529741 6529798 10 123 10.0 6.0 8.0 1.1 150 chr3L 6529648 intron sfl + chr3L 6529723 intron sfl + chr3L 6529798 intron sfl + chr3L_10_6525001 chr3L_6525001 RAL-109_125b 2170 chr3L 6537289 6537296 chr3L 6537430 6537437 4 141 15.5 19.0 17.2 0.2 148 chr3L 6537289 intron sfl + chr3L 6537363 intron sfl + chr3L 6537437 intron sfl + chr3L_4_6535001 chr3L_6535001 RAL-109_125b 2171 chr3L 6537304 6537313 chr3L 6537425 6537454 7 138 9.5 18.5 14.0 0.5 150 chr3L 6537304 intron sfl + chr3L 6537379 intron sfl + chr3L 6537454 intron sfl + chr3L_7_6535001 chr3L_6535001 RAL-109_125b 2172 chr3L 6537314 6537328 chr3L 6537422 6537469 7 134 6.0 17.0 11.5 0.6 155 chr3L 6537314 intron sfl + chr3L 6537392 intron sfl + chr3L 6537469 intron sfl + chr3L_7_6535001 chr3L_6535001 RAL-109_125b 2173 chr3L 6555719 6555858 chr3L 6555849 6555986 14 134 0.0 0.0 0.0 14.0 267 chr3L 6555719 intron CG18769 + chr3L 6555852 intron CG18769 + chr3L 6555986 intron CG18769 + chr3L_14_6555001 chr3L_6555001 RAL-109_125b 2174 chr3L 6610146 6610161 chr3L 6610301 6610316 4 154 23.5 6.5 15.0 0.2 170 chr3L 6610146 intron CG8398 + chr3L 6610231 intron CG8398 + chr3L 6610316 intron CG8398 + chr3L_4_6610001 chr3L_6610001 RAL-109_125b 2175 chr3L 6610165 6610216 chr3L 6610297 6610326 25 146 10.0 6.0 8.0 2.8 161 chr3L 6610165 intron CG8398 + chr3L 6610246 intron CG8398 + chr3L 6610326 intron CG8398 + chr3L_25_6610001 chr3L_6610001 RAL-109_125b 2176 chr3L 6619224 6619295 chr3L 6619437 6619508 28 212 5.0 10.5 7.8 3.2 284 chr3L 6619224 intergenic CG8398 + chr3L 6619366 intergenic CG8398 + chr3L 6619508 intergenic CG8398 + chr3L_28_6615001 chr3L_6615001 RAL-109_125b 2177 chr3L 6620562 6620593 chr3L 6621052 6621083 Rt1c 18 488 7.5 14.5 11.0 1.5 521 chr3L 6620562 intergenic not near genes chr3L 6620822 intergenic not near genes chr3L 6621083 intergenic not near genes chr3L_18_6620001 chr3L_6620001 RAL-109_125b 2178 chr3L 6621684 6621753 chr3L 6621917 6621971 15 225 6.0 9.0 7.5 1.8 287 chr3L 6621684 intergenic not near genes chr3L 6621828 intergenic not near genes chr3L 6621971 intergenic not near genes chr3L_15_6620001 chr3L_6620001 RAL-109_125b 2179 chr3L 6643106 6643168 chr3L 6643228 6643305 19 131 9.0 5.0 7.0 2.4 199 chr3L 6643106 intergenic CR45239 + chr3L 6643206 intergenic CR45239 + chr3L 6643305 intergenic CR45239 + chr3L_19_6640001 chr3L_6640001 RAL-109_125b 2180 chr3L 6781086 6781153 chr3L 6783149 6783213 Doc 9 2059 3.5 1.0 2.2 2.8 2127 chr3L 6781086 intergenic not near genes chr3L 6782150 intergenic not near genes chr3L 6783213 intergenic not near genes chr3L_9_6780001 chr3L_6780001 RAL-109_125b 2181 chr3L 6855886 6855937 chr3L 6860717 6860718 Doc 13 4816 6.5 6.0 6.2 1.8 4832 chr3L 6855886 intergenic not near genes chr3L 6858302 intergenic not near genes chr3L 6860718 intergenic not near genes chr3L_13_6855001 chr3L_6855001 RAL-109_125b 2182 chr3L 6887476 6887488 chr3L 6895018 6895030 roo 8 7542 17.5 8.5 13.0 0.6 7554 chr3L 6887476 intergenic not near genes chr3L 6891253 intergenic not near genes chr3L 6895030 intergenic not near genes chr3L_8_6890001 chr3L_6890001 RAL-109_125b 2183 chr3L 6887490 6887536 chr3L 6895015 6895078 roo 17 7539 7.0 7.5 7.2 2.1 7588 chr3L 6887490 intergenic not near genes chr3L 6891284 intergenic not near genes chr3L 6895078 intergenic not near genes chr3L_17_6890001 chr3L_6890001 RAL-109_125b 2184 chr3L 6919764 6919782 chr3L 6919894 6919912 5 129 9.0 9.0 9.0 0.5 148 chr3L 6919764 intergenic not near genes chr3L 6919838 intergenic not near genes chr3L 6919912 intergenic not near genes chr3L_5_6915001 chr3L_6915001 RAL-109_125b 2185 chr3L 6934300 6934357 chr3L 6934460 6934518 8 161 9.0 4.5 6.8 1.0 218 chr3L 6934300 exon CG14820 + chr3L 6934409 intron CG14820 + chr3L 6934518 exon CG14820 + chr3L_8_6930001 chr3L_6930001 RAL-109_125b 2186 chr3L 6942028 6942072 chr3L 6942177 6942216 16 148 8.5 10.5 9.5 1.5 188 chr3L 6942028 intergenic not near genes chr3L 6942122 intergenic not near genes chr3L 6942216 intergenic not near genes chr3L_16_6940001 chr3L_6940001 RAL-109_125b 2187 chr3L 7001938 7001971 chr3L 7002109 7002142 7 170 12.5 7.0 9.8 0.6 204 chr3L 7001938 intron Mp + chr3L 7002040 intron Mp + chr3L 7002142 intron Mp + chr3L_7_7000001 chr3L_7000001 RAL-109_125b 2188 chr3L 7007365 7007389 chr3L 7007509 7007534 9 145 1.0 17.5 9.2 0.9 169 chr3L 7007365 intron Mp + chr3L 7007450 intron Mp + chr3L 7007534 intron Mp + chr3L_9_7005001 chr3L_7005001 RAL-109_125b 2189 chr3L 7022013 7022030 chr3L 7022266 7022288 8 254 0.0 13.5 6.8 1.0 275 chr3L 7022013 intron Mp + chr3L 7022150 intron Mp + chr3L 7022288 intron Mp + chr3L_8_7020001 chr3L_7020001 RAL-109_125b 2190 chr3L 7059295 7059363 chr3L 7059489 7059561 24 198 3.5 7.0 5.2 3.9 266 chr3L 7059295 3` UTR CG8641 - chr3L 7059428 3` UTR CG8641 - chr3L 7059561 3` UTR CG8641 - chr3L_24_7055001 chr3L_7055001 RAL-109_125b 2191 chr3L 7061356 7061404 chr3L 7061492 7061540 21 136 5.5 7.0 6.2 2.9 184 chr3L 7061356 intron CG8641 - chr3L 7061448 intron CG8641 - chr3L 7061540 intron CG8641 - chr3L_21_7060001 chr3L_7060001 RAL-109_125b 2192 chr3L 7079571 7079637 chr3L 7079698 7079764 15 126 7.0 7.0 7.0 1.9 193 chr3L 7079571 intergenic not near genes chr3L 7079668 intergenic not near genes chr3L 7079764 intergenic not near genes chr3L_15_7075001 chr3L_7075001 RAL-109_125b 2193 chr3L 7090847 7090915 chr3L 7090980 7091049 19 132 7.0 11.5 9.2 1.9 202 chr3L 7090847 intergenic not near genes chr3L 7090948 intergenic not near genes chr3L 7091049 intergenic not near genes chr3L_19_7090001 chr3L_7090001 RAL-109_125b 2194 chr3L 7258880 7258931 chr3L 7259068 7259121 13 190 4.5 5.0 4.8 2.2 241 chr3L 7258880 intron CG14830 - chr3L 7259000 intron CG14830 - chr3L 7259121 intron CG14830 - chr3L_13_7255001 chr3L_7255001 RAL-109_125b 2195 chr3L 7264824 7264893 chr3L 7264970 7265026 6 134 0.0 2.5 1.2 2.7 202 chr3L 7264824 intergenic not near genes chr3L 7264925 intergenic not near genes chr3L 7265026 intergenic not near genes chr3L_6_7260001 chr3L_7260001 RAL-109_125b 2196 chr3L 7276106 7276172 chr3L 7276234 7276304 10 132 4.5 4.5 4.5 1.8 198 chr3L 7276106 intron unc-13-4A - chr3L 7276205 intron unc-13-4A - chr3L 7276304 intron unc-13-4A - chr3L_10_7275001 chr3L_7275001 RAL-109_125b 2197 chr3L 7290733 7290744 chr3L 7290863 7290880 7 132 16.0 9.0 12.5 0.5 147 chr3L 7290733 intron unc-13-4A - chr3L 7290806 intron unc-13-4A - chr3L 7290880 intron unc-13-4A - chr3L_7_7290001 chr3L_7290001 RAL-109_125b 2198 chr3L 7290751 7290754 chr3L 7290862 7290866 6 121 14.0 9.0 11.5 0.5 115 chr3L 7290751 intron unc-13-4A - chr3L 7290808 intron unc-13-4A - chr3L 7290866 intron unc-13-4A - chr3L_6_7290001 chr3L_7290001 RAL-109_125b 2199 chr3L 7290755 7290800 chr3L 7290861 7290925 11 128 7.0 9.0 8.0 1.2 170 chr3L 7290755 intron unc-13-4A - chr3L 7290840 intron unc-13-4A - chr3L 7290925 intron unc-13-4A - chr3L_11_7290001 chr3L_7290001 RAL-109_125b 2200 chr3L 7377269 7377339 chr3L 7380424 7380488 297 26 3153 8.5 8.5 8.5 2.7 3219 chr3L 7377269 intron SMSr - chr3L 7378878 intron SMSr - chr3L 7380488 intron SMSr - chr3L_26_7375001 chr3L_7375001 RAL-109_125b 2201 chr3L 7449424 7449442 chr3L 7449551 7449572 7 128 0.0 5.0 2.5 2.0 148 chr3L 7449424 intron CG42458 + chr3L 7449498 intron CG42458 + chr3L 7449572 intron CG42458 + chr3L_7_7445001 chr3L_7445001 RAL-109_125b 2202 chr3L 7449448 7449455 chr3L 7449542 7449575 4 118 0.0 5.0 2.5 1.1 127 chr3L 7449448 intron CG42458 + chr3L 7449512 intron CG42458 + chr3L 7449575 intron CG42458 + chr3L_4_7445001 chr3L_7445001 RAL-109_125b 2203 chr3L 7450640 7450710 chr3L 7450772 7450840 19 129 6.0 3.5 4.8 3.3 200 chr3L 7450640 intron CG42458 + chr3L 7450740 intron CG42458 + chr3L 7450840 intron CG42458 + chr3L_19_7450001 chr3L_7450001 RAL-109_125b 2204 chr3L 7455241 7455298 chr3L 7455404 7455461 6 163 0.0 12.5 6.2 0.8 220 chr3L 7455241 intergenic not near genes chr3L 7455351 intergenic not near genes chr3L 7455461 intergenic not near genes chr3L_6_7455001 chr3L_7455001 RAL-109_125b 2205 chr3L 7498728 7498778 chr3L 7503555 7503605 F-element 16 4827 7.5 9.5 8.5 1.7 4877 chr3L 7498728 5` UTR CG8539 - chr3L 7501166 intergenic not near genes chr3L 7503605 intergenic not near genes chr3L_16_7500001 chr3L_7500001 RAL-109_125b 2206 chr3L 7505385 7505433 chr3L 7505511 7505559 21 126 3.0 10.5 6.8 2.7 174 chr3L 7505385 intergenic CG7548 - chr3L 7505472 intergenic CG7548 - chr3L 7505559 3` UTR CG7548 - chr3L_21_7505001 chr3L_7505001 RAL-109_125b 2207 chr3L 7508638 7508702 chr3L 7508767 7508827 19 132 6.5 0.5 3.5 4.2 189 chr3L 7508638 intergenic not near genes chr3L 7508732 intergenic not near genes chr3L 7508827 intergenic not near genes chr3L_19_7505001 chr3L_7505001 RAL-109_125b 2208 chr3L 7524101 7524170 chr3L 7524228 7524302 23 131 10.5 6.0 8.2 2.5 201 chr3L 7524101 intron ltl + chr3L 7524202 intron ltl + chr3L 7524302 intron ltl + chr3L_23_7520001 chr3L_7520001 RAL-109_125b 2209 chr3L 7528267 7528337 chr3L 7528401 7528471 20 132 6.5 8.0 7.2 2.4 204 chr3L 7528267 intergenic ltl + chr3L 7528369 intergenic ltl +,lqf + chr3L 7528471 intergenic lqf +,ltl + chr3L_20_7525001 chr3L_7525001 RAL-109_125b 2210 chr3L 7568909 7568969 chr3L 7569038 7569098 15 128 5.0 5.0 5.0 2.5 189 chr3L 7568909 exon frac + chr3L 7569004 intron frac + chr3L 7569098 exon frac + chr3L_15_7565001 chr3L_7565001 RAL-109_125b 2211 chr3L 7572873 7572928 chr3L 7573035 7573090 23 162 11.0 7.0 9.0 2.3 217 chr3L 7572873 intergenic not near genes chr3L 7572982 intergenic not near genes chr3L 7573090 intergenic not near genes chr3L_23_7570001 chr3L_7570001 RAL-109_125b 2212 chr3L 7591101 7591177 chr3L 7591242 7591283 27 132 4.5 8.0 6.2 3.8 182 chr3L 7591101 intergenic CG7716 - chr3L 7591192 intergenic CG7716 - chr3L 7591283 intergenic CG7716 - chr3L_27_7590001 chr3L_7590001 RAL-109_125b 2213 chr3L 7691801 7691861 chr3L 7691943 7692006 20 141 4.5 8.0 6.2 2.8 205 chr3L 7691801 intron,intron,intron CG32373 +,Ank2 -,CG44195 - chr3L 7691904 intron,intron,intron CG32373 +,Ank2 -,CG44195 - chr3L 7692006 intron,intron,intron CG32373 +,Ank2 -,CG44195 - chr3L_20_7690001 chr3L_7690001 RAL-109_125b 2214 chr3L 7727114 7727171 chr3L 7727233 7727302 24 130 4.0 4.0 4.0 4.8 188 chr3L 7727114 intron CG32373 + chr3L 7727208 intron CG32373 + chr3L 7727302 intron CG32373 + chr3L_24_7725001 chr3L_7725001 RAL-109_125b 2215 chr3L 7793673 7793741 chr3L 7800775 7800787 297 20 7099 11.5 10.5 11.0 1.7 7114 chr3L 7793673 intron CG32369 - chr3L 7797230 intron CG32369 - chr3L 7800787 intron CG32369 - chr3L_20_7795001 chr3L_7795001 RAL-109_125b 2216 chr3L 7822486 7822508 chr3L 7822612 7822634 7 125 11.0 4.5 7.8 0.8 148 chr3L 7822486 intron Pdp1 - chr3L 7822560 intron Pdp1 - chr3L 7822634 intron Pdp1 - chr3L_7_7820001 chr3L_7820001 RAL-109_125b 2217 chr3L 7845342 7845418 chr3L 7845475 7845550 22 130 3.0 5.5 4.2 4.2 208 chr3L 7845342 intron Pdp1 - chr3L 7845446 intron Pdp1 - chr3L 7845550 intron Pdp1 - chr3L_22_7845001 chr3L_7845001 RAL-109_125b 2218 chr3L 7857307 7857368 chr3L 7857423 7857465 24 126 8.5 9.0 8.8 2.4 158 chr3L 7857307 intron Pdp1 - chr3L 7857386 intron Pdp1 - chr3L 7857465 intron Pdp1 - chr3L_24_7855001 chr3L_7855001 RAL-109_125b 2219 chr3L 7871044 7871051 chr3L 7871193 7871200 4 149 9.0 5.5 7.2 0.5 156 chr3L 7871044 intron CG32365 + chr3L 7871122 intron CG32365 + chr3L 7871200 intron CG32365 + chr3L_4_7870001 chr3L_7870001 RAL-109_125b 2220 chr3L 7886473 7886540 chr3L 7889041 7889107 Stalker4 27 2567 8.5 9.0 8.8 2.8 2634 chr3L 7886473 intron CG32365 + chr3L 7887790 intron CG32365 + chr3L 7889107 intron CG32365 + chr3L_27_7885001 chr3L_7885001 RAL-109_125b 2221 chr3L 7903017 7903079 chr3L 7903149 7903211 19 132 7.5 10.5 9.0 1.9 194 chr3L 7903017 intron pbl - chr3L 7903114 intron pbl - chr3L 7903211 intron pbl - chr3L_19_7900001 chr3L_7900001 RAL-109_125b 2222 chr3L 7916796 7916853 chr3L 7926013 7926073 roo 23 9219 7.0 6.0 6.5 3.1 9277 chr3L 7916796 3` UTR syd - chr3L 7921434 intron syd - chr3L 7926073 3` UTR syd - chr3L_23_7920001 chr3L_7920001 RAL-109_125b 2223 chr3L 7985323 7985349 chr3L 7987701 7987727 NOF 13 2377 11.5 14.0 12.8 0.9 2404 chr3L 7985323 intron nmo + chr3L 7986525 intron nmo + chr3L 7987727 intron nmo + chr3L_13_7985001 chr3L_7985001 RAL-109_125b 2224 chr3L 7985357 7985390 chr3L 7987690 7987768 NOF 15 2373 5.0 9.5 7.2 1.8 2411 chr3L 7985357 intron nmo + chr3L 7986562 intron nmo + chr3L 7987768 intron nmo + chr3L_15_7985001 chr3L_7985001 RAL-109_125b 2225 chr3L 8007503 8007578 chr3L 8007636 8007711 19 131 3.5 7.0 5.2 3.1 208 chr3L 8007503 intron nmo + chr3L 8007607 intron nmo + chr3L 8007711 intron nmo + chr3L_19_8005001 chr3L_8005001 RAL-109_125b 2226 chr3L 8019686 8019730 chr3L 8024149 8024191 NOF 8 4460 5.0 10.5 7.8 0.9 4505 chr3L 8019686 intron nmo + chr3L 8021938 intron nmo + chr3L 8024191 intron nmo + chr3L_8_8020001 chr3L_8020001 RAL-109_125b 2227 chr3L 8059995 8060055 chr3L 8060145 8060198 15 147 7.5 10.0 8.8 1.5 203 chr3L 8059995 intergenic not near genes chr3L 8060096 intergenic not near genes chr3L 8060198 intergenic not near genes chr3L_15_8060001 chr3L_8060001 RAL-109_125b 2228 chr3L 8062804 8062839 chr3L 8062928 8062956 15 121 10.5 9.0 9.8 1.4 152 chr3L 8062804 intergenic not near genes chr3L 8062880 intergenic not near genes chr3L 8062956 intergenic not near genes chr3L_15_8060001 chr3L_8060001 RAL-109_125b 2229 chr3L 8148001 8148079 chr3L 8148259 8148337 11 258 4.0 8.0 6.0 1.6 336 chr3L 8148001 intron CG13676 - chr3L 8148169 intron CG13676 - chr3L 8148337 intron CG13676 - chr3L_11_8145001 chr3L_8145001 RAL-109_125b 2230 chr3L 8207067 8207145 chr3L 8207198 8207276 19 131 2.0 5.0 3.5 4.2 209 chr3L 8207067 intergenic not near genes chr3L 8207172 intergenic not near genes chr3L 8207276 intergenic not near genes chr3L_19_8205001 chr3L_8205001 RAL-109_125b 2231 chr3L 8214840 8214849 chr3L 8216507 8216516 4 1667 6.0 6.5 6.2 0.6 1676 chr3L 8214840 intergenic CG8012 + chr3L 8215678 exon CG8012 + chr3L 8216516 intergenic CG8012 + chr3L_4_8215001 chr3L_8215001 RAL-109_125b 2232 chr3L 8219507 8219591 chr3L 8219848 8219896 23 338 4.5 2.5 3.5 5.1 389 chr3L 8219507 intergenic not near genes chr3L 8219702 intergenic not near genes chr3L 8219896 intergenic not near genes chr3L_23_8215001 chr3L_8215001 RAL-109_125b 2233 chr3L 8226676 8226746 chr3L 8226825 8226888 5 146 1.5 0.0 0.8 2.8 212 chr3L 8226676 intergenic not near genes chr3L 8226782 intergenic not near genes chr3L 8226888 intergenic not near genes chr3L_5_8225001 chr3L_8225001 RAL-109_125b 2234 chr3L 8233552 8233583 chr3L 8238854 8238884 Rt1a 14 5311 8.0 10.5 9.2 1.4 5332 chr3L 8233552 intron CG7213 - chr3L 8236218 intron CG7213 - chr3L 8238884 intron,intron CG7213 -,Dscam4 + chr3L_14_8235001 chr3L_8235001 RAL-109_125b 2235 chr3L 8274790 8274797 chr3L 8274954 8274961 7 164 19.5 0.0 9.8 0.6 171 chr3L 8274790 intron Dscam4 + chr3L 8274876 intron Dscam4 + chr3L 8274961 intron Dscam4 + chr3L_7_8270001 chr3L_8270001 RAL-109_125b 2236 chr3L 8369901 8369921 chr3L 8370002 8370048 7 111 9.5 11.5 10.5 0.6 147 chr3L 8369901 intergenic not near genes chr3L 8369974 intergenic not near genes chr3L 8370048 intergenic not near genes chr3L_7_8365001 chr3L_8365001 RAL-109_125b 2237 chr3L 8371709 8371716 chr3L 8371844 8371852 4 136 0.0 8.5 4.2 0.8 143 chr3L 8371709 intergenic not near genes chr3L 8371780 intergenic not near genes chr3L 8371852 intergenic not near genes chr3L_4_8370001 chr3L_8370001 RAL-109_125b 2238 chr3L 8371717 8371753 chr3L 8371838 8371889 5 132 0.0 8.0 4.0 1.0 172 chr3L 8371717 intergenic not near genes chr3L 8371803 intergenic not near genes chr3L 8371889 intergenic not near genes chr3L_5_8370001 chr3L_8370001 RAL-109_125b 2239 chr3L 8383949 8384005 chr3L 8384056 8384086 12 103 11.5 10.5 11.0 1.0 137 chr3L 8383949 intron ImpE1 + chr3L 8384018 intron ImpE1 + chr3L 8384086 intron ImpE1 + chr3L_12_8380001 chr3L_8380001 RAL-109_125b 2240 chr3L 8481770 8481799 chr3L 8490938 8490978 roo 13 9183 10.5 4.5 7.5 1.5 9208 chr3L 8481770 intron CG43163 - chr3L 8486374 intron CG43163 - chr3L 8490978 intron CG43163 - chr3L_13_8485001 chr3L_8485001 RAL-109_125b 2241 chr3L 8498262 8498317 chr3L 8505779 8505834 blood 19 7514 6.0 9.0 7.5 2.2 7572 chr3L 8498262 intron CG43163 - chr3L 8502048 intron CG43163 - chr3L 8505834 intron CG43163 - chr3L_19_8500001 chr3L_8500001 RAL-109_125b 2242 chr3L 8558614 8558693 chr3L 8558755 8558809 19 139 6.5 5.5 6.0 2.7 195 chr3L 8558614 intron rhea + chr3L 8558712 intron rhea + chr3L 8558809 intron rhea + chr3L_19_8555001 chr3L_8555001 RAL-109_125b 2243 chr3L 8643538 8643601 chr3L 8643664 8643727 20 126 8.0 14.0 11.0 1.7 189 chr3L 8643538 3` UTR Cpr66D + chr3L 8643632 intergenic Cpr66D + chr3L 8643727 intergenic Cpr66D + chr3L_20_8640001 chr3L_8640001 RAL-109_125b 2244 chr3L 8752364 8752445 chr3L 8752602 8752684 38 237 6.0 9.0 7.5 4.5 320 chr3L 8752364 intergenic not near genes chr3L 8752524 intergenic not near genes chr3L 8752684 intergenic not near genes chr3L_38_8750001 chr3L_8750001 RAL-109_125b 2245 chr3L 8791237 8791305 chr3L 8796707 8796774 I-element 17 5468 5.5 0.5 3.0 4.2 5537 chr3L 8791237 exon Fhos + chr3L 8794006 intron Fhos + chr3L 8796774 intron Fhos + chr3L_17_8790001 chr3L_8790001 RAL-109_125b 2246 chr3L 8826729 8826744 chr3L 8826897 8826912 9 168 19.0 7.0 13.0 0.6 183 chr3L 8826729 intergenic not near genes chr3L 8826820 intergenic not near genes chr3L 8826912 intergenic not near genes chr3L_9_8825001 chr3L_8825001 RAL-109_125b 2247 chr3L 8826749 8826800 chr3L 8826895 8826966 16 159 8.5 6.5 7.5 1.9 217 chr3L 8826749 intergenic not near genes chr3L 8826858 intergenic not near genes chr3L 8826966 intergenic not near genes chr3L_16_8825001 chr3L_8825001 RAL-109_125b 2248 chr3L 8832379 8832428 chr3L 8832507 8832571 16 142 7.5 9.5 8.5 1.7 192 chr3L 8832379 intron dally + chr3L 8832475 intron dally + chr3L 8832571 intron dally + chr3L_16_8830001 chr3L_8830001 RAL-109_125b 2249 chr3L 8859278 8859350 chr3L 8859410 8859467 22 130 5.0 8.5 6.8 2.8 189 chr3L 8859278 intron dally + chr3L 8859372 intron dally + chr3L 8859467 intron dally + chr3L_22_8855001 chr3L_8855001 RAL-109_125b 2250 chr3L 8861463 8861539 chr3L 8861613 8861680 14 147 1.0 3.5 2.2 4.4 217 chr3L 8861463 intron dally + chr3L 8861572 intron dally + chr3L 8861680 intron dally + chr3L_14_8860001 chr3L_8860001 RAL-109_125b 2251 chr3L 8884354 8884420 chr3L 8884603 8884644 11 244 9.5 2.5 6.0 1.6 290 chr3L 8884354 intron dally + chr3L 8884499 intron dally + chr3L 8884644 intron dally + chr3L_11_8880001 chr3L_8880001 RAL-109_125b 2252 chr3L 8928219 8928295 chr3L 8928345 8928421 17 126 4.5 6.0 5.2 2.7 202 chr3L 8928219 intron Tsp66E + chr3L 8928320 intron Tsp66E + chr3L 8928421 intron Tsp66E + chr3L_17_8925001 chr3L_8925001 RAL-109_125b 2253 chr3L 8966527 8966601 chr3L 8966656 8966699 14 124 3.0 8.0 5.5 2.2 172 chr3L 8966527 intergenic CG5653 -,CG5021 + chr3L 8966613 intergenic CG5021 +,CG5653 - chr3L 8966699 intergenic CG5021 +,CG5653 - chr3L_14_8965001 chr3L_8965001 RAL-109_125b 2254 chr3L 9003088 9003154 chr3L 9003218 9003284 13 128 0.0 4.0 2.0 4.3 196 chr3L 9003088 intergenic not near genes chr3L 9003186 intergenic not near genes chr3L 9003284 intergenic not near genes chr3L_13_9000001 chr3L_9000001 RAL-109_125b 2255 chr3L 9011081 9011098 chr3L 9011217 9011234 12 136 15.0 3.5 9.2 1.2 153 chr3L 9011081 intergenic not near genes chr3L 9011158 intergenic not near genes chr3L 9011234 intergenic not near genes chr3L_12_9010001 chr3L_9010001 RAL-109_125b 2256 chr3L 9011102 9011118 chr3L 9011214 9011254 5 129 12.5 3.0 7.8 0.6 152 chr3L 9011102 intergenic not near genes chr3L 9011178 intergenic not near genes chr3L 9011254 intergenic not near genes chr3L_5_9010001 chr3L_9010001 RAL-109_125b 2257 chr3L 9013690 9013693 chr3L 18417066 18417066 7 9403375 40.5 31.0 35.8 0.2 9403376 chr3L 9013690 intron Doc2 - chr3L 13715378 intron bru-3 - chr3L 18417066 intergenic not near genes chr3L_7_13715001 chr3L_13715001 RAL-109_125b 2258 chr3L 9024455 9024526 chr3L 9024585 9024656 34 127 6.5 6.0 6.2 4.7 201 chr3L 9024455 intergenic not near genes chr3L 9024556 intergenic not near genes chr3L 9024656 intergenic not near genes chr3L_34_9020001 chr3L_9020001 RAL-109_125b 2259 chr3L 9036249 9036272 chr3L 9036380 9036404 4 129 10.0 8.0 9.0 0.4 155 chr3L 9036249 intergenic not near genes chr3L 9036326 intergenic not near genes chr3L 9036404 intergenic not near genes chr3L_4_9035001 chr3L_9035001 RAL-109_125b 2260 chr3L 9076884 9076945 chr3L 9084494 9084555 412 22 7608 12.5 9.5 11.0 1.8 7671 chr3L 9076884 exon Tequila + chr3L 9080720 intron Tequila + chr3L 9084555 exon Tequila + chr3L_22_9080001 chr3L_9080001 RAL-109_125b 2261 chr3L 9109716 9109736 chr3L 9110560 9110562 7 841 11.0 9.0 10.0 0.6 846 chr3L 9109716 intron bol - chr3L 9110139 intron bol - chr3L 9110562 intron bol - chr3L_7_9110001 chr3L_9110001 RAL-109_125b 2262 chr3L 9109739 9109774 chr3L 9110553 9110577 10 817 5.5 7.0 6.2 1.4 838 chr3L 9109739 intron bol - chr3L 9110158 intron bol - chr3L 9110577 intron bol - chr3L_10_9110001 chr3L_9110001 RAL-109_125b 2263 chr3L 9118343 9118345 chr3L 9118456 9118475 4 126 18.5 12.5 15.5 0.2 132 chr3L 9118343 intron bol - chr3L 9118409 intron bol - chr3L 9118475 intron bol - chr3L_4_9115001 chr3L_9115001 RAL-109_125b 2264 chr3L 9130510 9130578 chr3L 9134321 9134389 412 20 3808 10.0 7.0 8.5 2.1 3879 chr3L 9130510 intergenic bol - chr3L 9132450 intergenic not near genes chr3L 9134389 intergenic Dhpr + chr3L_20_9130001 chr3L_9130001 RAL-109_125b 2265 chr3L 9143342 9143390 chr3L 9143504 9143561 4 168 0.0 2.0 1.0 2.0 219 chr3L 9143342 intron nwk + chr3L 9143452 intron nwk + chr3L 9143561 exon nwk + chr3L_4_9140001 chr3L_9140001 RAL-109_125b 2266 chr3L 9164657 9164682 chr3L 9166174 9166199 hobo 12 1516 13.0 0.0 6.5 1.6 1542 chr3L 9164657 intron Rdl - chr3L 9165428 intron Rdl - chr3L 9166199 intron Rdl - chr3L_12_9165001 chr3L_9165001 RAL-109_125b 2267 chr3L 9167234 9167302 chr3L 9167365 9167433 14 128 5.0 9.0 7.0 1.8 199 chr3L 9167234 intron Rdl - chr3L 9167334 intron Rdl - chr3L 9167433 intron Rdl - chr3L_14_9165001 chr3L_9165001 RAL-109_125b 2268 chr3L 9213194 9213232 chr3L 9213324 9213331 12 125 9.5 0.0 4.8 2.1 137 chr3L 9213194 exon CG4476 + chr3L 9213262 intron CG4476 + chr3L 9213331 intron CG4476 + chr3L_12_9210001 chr3L_9210001 RAL-109_125b 2269 chr3L 9219203 9219211 chr3L 9219925 9219926 jockey 5 720 22.0 8.0 15.0 0.3 723 chr3L 9219203 intergenic not near genes chr3L 9219564 intergenic not near genes chr3L 9219926 intergenic not near genes chr3L_5_9215001 chr3L_9215001 RAL-109_125b 2270 chr3L 9219222 9219277 chr3L 9219915 9219920 jockey 14 707 6.5 8.0 7.2 1.7 698 chr3L 9219222 intergenic not near genes chr3L 9219571 intergenic not near genes chr3L 9219920 intergenic not near genes chr3L_14_9215001 chr3L_9215001 RAL-109_125b 2271 chr3L 9234478 9234557 chr3L 9234739 9234818 31 258 5.5 1.5 3.5 6.9 340 chr3L 9234478 intergenic not near genes chr3L 9234648 intergenic not near genes chr3L 9234818 intergenic CG4483 - chr3L_31_9230001 chr3L_9230001 RAL-109_125b 2272 chr3L 9270580 9270650 chr3L 9278381 9278406 roo 19 7786 6.0 8.0 7.0 2.4 7826 chr3L 9270580 intron GluRIB + chr3L 9274493 intron GluRIB + chr3L 9278406 exon GluRIB + chr3L_19_9270001 chr3L_9270001 RAL-109_125b 2273 chr3L 9306931 9306972 chr3L 9307060 9307081 21 121 11.0 10.5 10.8 1.8 150 chr3L 9306931 intergenic not near genes chr3L 9307006 intergenic not near genes chr3L 9307081 intergenic not near genes chr3L_21_9305001 chr3L_9305001 RAL-109_125b 2274 chr3L 9307796 9307796 chr3L 22908066 22908066 6 13600270 34.5 35.5 35.0 0.2 13600270 chr3L 9307796 intergenic not near genes chr3L 16107931 intron Zn72D - chr3L 22908066 intergenic not near genes chr3L_6_16105001 chr3L_16105001 RAL-109_125b 2275 chr3L 9348623 9348647 chr3L 9348794 9348838 7 189 5.0 6.5 5.8 1.0 215 chr3L 9348623 intergenic PGRP-LC + chr3L 9348730 intergenic PGRP-LC + chr3L 9348838 intergenic not near genes chr3L_7_9345001 chr3L_9345001 RAL-109_125b 2276 chr3L 9359545 9359612 chr3L 9359686 9359753 26 140 8.0 6.5 7.2 3.2 208 chr3L 9359545 3` UTR CG32039 + chr3L 9359649 3` UTR CG32039 + chr3L 9359753 3` UTR CG32039 + chr3L_26_9355001 chr3L_9355001 RAL-109_125b 2277 chr3L 9429482 9429541 chr3L 9429621 9429682 8 142 4.0 15.0 9.5 0.8 200 chr3L 9429482 intron,3` UTR RpS17 -,snoRNA:Psi28S-612 - chr3L 9429582 intron RpS17 - chr3L 9429682 intron RpS17 - chr3L_8_9425001 chr3L_9425001 RAL-109_125b 2278 chr3L 9443494 9443535 chr3L 9445330 9445366 S-element 18 1840 3.0 15.5 9.2 1.8 1872 chr3L 9443494 intron CG33926 + chr3L 9444430 intron CG33926 + chr3L 9445366 intron CG33926 + chr3L_18_9440001 chr3L_9440001 RAL-109_125b 2279 chr3L 9498157 9498214 chr3L 9498284 9498341 16 126 9.0 9.5 9.2 1.6 184 chr3L 9498157 intron path - chr3L 9498249 intron path - chr3L 9498341 intron path - chr3L_16_9495001 chr3L_9495001 RAL-109_125b 2280 chr3L 9501697 9501734 chr3L 9502303 9502340 roo 25 605 7.0 6.5 6.8 3.2 643 chr3L 9501697 intron path - chr3L 9502018 intron path - chr3L 9502340 intron path - chr3L_25_9500001 chr3L_9500001 RAL-109_125b 2281 chr3L 9503418 9503457 chr3L 9503557 9503596 15 137 9.0 12.0 10.5 1.3 178 chr3L 9503418 intron path - chr3L 9503507 intron path - chr3L 9503596 intron path - chr3L_15_9500001 chr3L_9500001 RAL-109_125b 2282 chr3L 9520072 9520148 chr3L 9520627 9520693 26 552 8.0 6.0 7.0 3.2 621 chr3L 9520072 intron CG33700 - chr3L 9520382 intron CG33700 - chr3L 9520693 intron CG33700 - chr3L_26_9520001 chr3L_9520001 RAL-109_125b 2283 chr3L 9526437 9526508 chr3L 9528165 9528238 Doc 19 1729 5.5 4.5 5.0 3.2 1801 chr3L 9526437 intergenic not near genes chr3L 9527338 intergenic not near genes chr3L 9528238 intergenic not near genes chr3L_19_9525001 chr3L_9525001 RAL-109_125b 2284 chr3L 9533705 9533785 chr3L 9541315 9541335 412 15 7584 5.5 7.5 6.5 2.0 7630 chr3L 9533705 intergenic not near genes chr3L 9537520 intergenic not near genes chr3L 9541335 intergenic not near genes chr3L_15_9535001 chr3L_9535001 RAL-109_125b 2285 chr3L 9555926 9555958 chr3L 9556054 9556086 13 125 7.0 12.0 9.5 1.2 160 chr3L 9555926 intron CG42673 + chr3L 9556006 intron CG42673 + chr3L 9556086 intron CG42673 + chr3L_13_9555001 chr3L_9555001 RAL-109_125b 2286 chr3L 9571864 9571934 chr3L 9572262 9572332 jockey 16 397 4.0 2.0 3.0 4.0 468 chr3L 9571864 intron CG42673 + chr3L 9572098 intron CG42673 + chr3L 9572332 intron CG42673 + chr3L_16_9570001 chr3L_9570001 RAL-109_125b 2287 chr3L 9572250 9572334 chr3L 9572379 9572463 19 129 0.0 3.5 1.8 6.8 213 chr3L 9572250 intron CG42673 + chr3L 9572356 intron CG42673 + chr3L 9572463 intron CG42673 + chr3L_19_9570001 chr3L_9570001 RAL-109_125b 2288 chr3L 9575871 9575936 chr3L 9580993 9581049 jockey 23 5119 8.5 5.0 6.8 2.9 5178 chr3L 9575871 intron CG42673 + chr3L 9578460 intron CG42673 + chr3L 9581049 intron CG42673 + chr3L_23_9575001 chr3L_9575001 RAL-109_125b 2289 chr3L 9613852 9613893 chr3L 9613985 9614030 11 137 5.0 0.0 2.5 3.1 178 chr3L 9613852 3` UTR CG3280 + chr3L 9613941 intergenic CG3280 + chr3L 9614030 intergenic CG3280 + chr3L_11_9610001 chr3L_9610001 RAL-109_125b 2290 chr3L 9637807 9637867 chr3L 9637939 9637999 20 130 16.0 5.5 10.8 1.7 192 chr3L 9637807 exon fry - chr3L 9637903 intron fry - chr3L 9637999 intron fry - chr3L_20_9635001 chr3L_9635001 RAL-109_125b 2291 chr3L 9638975 9639053 chr3L 9639114 9639188 16 136 0.0 8.0 4.0 3.2 213 chr3L 9638975 intron,3` UTR fry -,CG8329 + chr3L 9639082 intron fry - chr3L 9639188 intron fry - chr3L_16_9635001 chr3L_9635001 RAL-109_125b 2292 chr3L 9715553 9715575 chr3L 9715679 9715681 13 124 19.0 8.0 13.5 0.9 128 chr3L 9715553 intron vsg + chr3L 9715617 intron vsg + chr3L 9715681 intron vsg + chr3L_13_9715001 chr3L_9715001 RAL-109_125b 2293 chr3L 9715578 9715595 chr3L 9715675 9715721 9 120 15.5 8.5 12.0 0.7 143 chr3L 9715578 intron vsg + chr3L 9715650 intron vsg + chr3L 9715721 intron vsg + chr3L_9_9715001 chr3L_9715001 RAL-109_125b 2294 chr3L 9732381 9732390 chr3L 9732509 9732518 4 127 15.5 7.5 11.5 0.3 137 chr3L 9732381 exon CG6749 - chr3L 9732450 intron CG6749 - chr3L 9732518 intron CG6749 - chr3L_4_9730001 chr3L_9730001 RAL-109_125b 2295 chr3L 9732401 9732447 chr3L 9732499 9732575 14 125 7.5 5.5 6.5 1.9 174 chr3L 9732401 exon CG6749 - chr3L 9732488 intron CG6749 - chr3L 9732575 intron CG6749 - chr3L_14_9730001 chr3L_9730001 RAL-109_125b 2296 chr3L 9741575 9741628 chr3L 9741717 9741770 22 141 13.0 4.5 8.8 2.2 195 chr3L 9741575 intron,intron CG42268 -,CR44348 + chr3L 9741672 intron,intron CG42268 -,CR44348 + chr3L 9741770 intron,intron CG42268 -,CR44348 + chr3L_22_9740001 chr3L_9740001 RAL-109_125b 2297 chr3L 9755933 9755945 chr3L 9756045 9756062 7 113 46.5 53.0 49.8 0.1 129 chr3L 9755933 intron CG42268 - chr3L 9755998 intron CG42268 - chr3L 9756062 intron CG42268 - chr3L_7_9755001 chr3L_9755001 RAL-109_125b 2298 chr3L 9775304 9775360 chr3L 9775449 9775504 15 144 5.5 4.5 5.0 2.5 200 chr3L 9775304 intron CG8177 + chr3L 9775404 intron CG8177 + chr3L 9775504 intron CG8177 + chr3L_15_9775001 chr3L_9775001 RAL-109_125b 2299 chr3L 9796441 9796514 chr3L 9796570 9796642 9 125 0.5 0.0 0.2 7.5 201 chr3L 9796441 intron Zasp67 - chr3L 9796542 intron Zasp67 - chr3L 9796642 intron Zasp67 - chr3L_9_9795001 chr3L_9795001 RAL-109_125b 2300 chr3L 9809687 9809746 chr3L 9809814 9809851 18 112 10.5 12.0 11.2 1.5 164 chr3L 9809687 intergenic not near genes chr3L 9809769 intergenic not near genes chr3L 9809851 intergenic not near genes chr3L_18_9805001 chr3L_9805001 RAL-109_125b 2301 chr3L 9814435 9814458 chr3L 9814562 9814585 7 126 9.5 4.5 7.0 0.9 150 chr3L 9814435 intron CG43897 + chr3L 9814510 intron CG43897 + chr3L 9814585 intron CG43897 + chr3L_7_9810001 chr3L_9810001 RAL-109_125b 2302 chr3L 9831659 9831709 chr3L 9831789 9831840 17 131 6.5 6.5 6.5 2.3 181 chr3L 9831659 intron CG43897 + chr3L 9831750 intron CG43897 + chr3L 9831840 intron CG43897 + chr3L_17_9830001 chr3L_9830001 RAL-109_125b 2303 chr3L 9847995 9848014 chr3L 9848110 9848134 7 122 2.0 14.5 8.2 0.8 139 chr3L 9847995 intron RasGAP1 - chr3L 9848064 intron RasGAP1 - chr3L 9848134 intron RasGAP1 - chr3L_7_9845001 chr3L_9845001 RAL-109_125b 2304 chr3L 9895310 9895381 chr3L 9895440 9895510 29 129 10.5 8.0 9.2 2.8 200 chr3L 9895310 3` UTR CG6707 - chr3L 9895410 3` UTR CG6707 - chr3L 9895510 3` UTR CG6707 - chr3L_29_9895001 chr3L_9895001 RAL-109_125b 2305 chr3L 9918850 9918913 chr3L 9918980 9919047 27 140 6.5 5.5 6.0 3.9 197 chr3L 9918850 intron CG34356 + chr3L 9918948 intron CG34356 + chr3L 9919047 intron CG34356 + chr3L_27_9915001 chr3L_9915001 RAL-109_125b 2306 chr3L 9929625 9929690 chr3L 9938455 9938506 roo 18 8829 6.5 6.0 6.2 2.5 8881 chr3L 9929625 intron CG34356 + chr3L 9934066 intron CG34356 + chr3L 9938506 intron CG34356 + chr3L_18_9930001 chr3L_9930001 RAL-109_125b 2307 chr3L 9992656 9992733 chr3L 9992782 9992860 13 127 4.5 0.0 2.2 4.1 204 chr3L 9992656 intron dpr6 + chr3L 9992758 intron dpr6 + chr3L 9992860 intron dpr6 + chr3L_13_9990001 chr3L_9990001 RAL-109_125b 2308 chr3L 10049498 10049567 chr3L 10049628 10049697 22 125 6.0 5.0 5.5 3.4 199 chr3L 10049498 intron dpr6 + chr3L 10049598 intron dpr6 + chr3L 10049697 intron dpr6 + chr3L_22_10045001 chr3L_10045001 RAL-109_125b 2309 chr3L 10058890 10058907 chr3L 10059030 10059047 5 138 12.5 9.0 10.8 0.4 157 chr3L 10058890 intron dpr6 + chr3L 10058968 intron dpr6 + chr3L 10059047 intron dpr6 + chr3L_5_10055001 chr3L_10055001 RAL-109_125b 2310 chr3L 10058910 10058951 chr3L 10059025 10059057 7 126 6.0 6.5 6.2 1.0 147 chr3L 10058910 intron dpr6 + chr3L 10058984 intron dpr6 + chr3L 10059057 intron dpr6 + chr3L_7_10055001 chr3L_10055001 RAL-109_125b 2311 chr3L 10060078 10060105 chr3L 10067707 10067734 17.6 11 7629 15.0 9.0 12.0 0.8 7656 chr3L 10060078 intron dpr6 + chr3L 10063906 intron dpr6 + chr3L 10067734 intron dpr6 + chr3L_11_10060001 chr3L_10060001 RAL-109_125b 2312 chr3L 10078069 10078137 chr3L 10078318 10078366 25 251 5.0 8.0 6.5 3.3 297 chr3L 10078069 intron dpr6 + chr3L 10078218 intron dpr6 + chr3L 10078366 intron dpr6 + chr3L_25_10075001 chr3L_10075001 RAL-109_125b 2313 chr3L 10127702 10127759 chr3L 10127829 10127853 10 117 11.0 0.5 5.8 1.5 151 chr3L 10127702 intron dpr6 + chr3L 10127778 intron dpr6 + chr3L 10127853 intron dpr6 + chr3L_10_10125001 chr3L_10125001 RAL-109_125b 2314 chr3L 10204035 10204076 chr3L 10204225 10204266 15 189 3.5 3.5 3.5 3.3 231 chr3L 10204035 intergenic not near genes chr3L 10204150 intergenic not near genes chr3L 10204266 intergenic not near genes chr3L_15_10200001 chr3L_10200001 RAL-109_125b 2315 chr3L 10214765 10214830 chr3L 10214917 10214982 23 150 7.5 5.5 6.5 3.1 217 chr3L 10214765 intergenic not near genes chr3L 10214874 intergenic not near genes chr3L 10214982 intergenic not near genes chr3L_23_10210001 chr3L_10210001 RAL-109_125b 2316 chr3L 10222690 10222770 chr3L 10222820 10222884 19 129 0.5 3.5 2.0 6.3 194 chr3L 10222690 intron scramb1 - chr3L 10222787 intron scramb1 - chr3L 10222884 intron scramb1 - chr3L_19_10220001 chr3L_10220001 RAL-109_125b 2317 chr3L 10250320 10250341 chr3L 10250451 10250482 8 139 0.0 11.0 5.5 1.2 162 chr3L 10250320 intergenic not near genes chr3L 10250401 intergenic not near genes chr3L 10250482 intergenic not near genes chr3L_8_10250001 chr3L_10250001 RAL-109_125b 2318 chr3L 10298626 10298701 chr3L 10298758 10298834 20 136 1.0 2.0 1.5 8.0 208 chr3L 10298626 intergenic not near genes chr3L 10298730 intergenic not near genes chr3L 10298834 intergenic not near genes chr3L_20_10295001 chr3L_10295001 RAL-109_125b 2319 chr3L 10308702 10308764 chr3L 10308829 10308885 14 124 2.0 9.5 5.8 2.1 183 chr3L 10308702 intergenic not near genes chr3L 10308794 intergenic not near genes chr3L 10308885 intergenic not near genes chr3L_14_10305001 chr3L_10305001 RAL-109_125b 2320 chr3L 10328068 10328128 chr3L 10328230 10328290 18 162 6.5 11.5 9.0 1.8 222 chr3L 10328068 intergenic not near genes chr3L 10328179 intergenic not near genes chr3L 10328290 intergenic not near genes chr3L_18_10325001 chr3L_10325001 RAL-109_125b 2321 chr3L 10414892 10414964 chr3L 10417310 10417386 Doc 14 2421 6.5 7.0 6.8 1.8 2494 chr3L 10414892 intergenic CG12362 + chr3L 10416139 intergenic not near genes chr3L 10417386 intergenic not near genes chr3L_14_10415001 chr3L_10415001 RAL-109_125b 2322 chr3L 10417528 10417605 chr3L 10417655 10417686 19 117 8.5 8.0 8.2 2.1 158 chr3L 10417528 intergenic not near genes chr3L 10417607 intergenic not near genes chr3L 10417686 intergenic not near genes chr3L_19_10415001 chr3L_10415001 RAL-109_125b 2323 chr3L 10450630 10450709 chr3L 10450777 10450839 17 132 0.0 10.5 5.2 2.7 209 chr3L 10450630 intergenic not near genes chr3L 10450734 intergenic not near genes chr3L 10450839 intergenic not near genes chr3L_17_10450001 chr3L_10450001 RAL-109_125b 2324 chr3L 10474188 10474201 chr3L 10474319 10474331 8 130 10.5 0.0 5.2 1.3 143 chr3L 10474188 intergenic not near genes chr3L 10474260 intergenic not near genes chr3L 10474331 intergenic not near genes chr3L_8_10470001 chr3L_10470001 RAL-109_125b 2325 chr3L 10481734 10481792 chr3L 10481860 10481908 26 125 10.0 11.5 10.8 2.2 174 chr3L 10481734 5` UTR A2bp1 + chr3L 10481821 5` UTR A2bp1 + chr3L 10481908 5` UTR A2bp1 + chr3L_26_10480001 chr3L_10480001 RAL-109_125b 2326 chr3L 10526635 10526639 chr3L 10526737 10526755 4 113 8.0 10.5 9.2 0.4 120 chr3L 10526635 intron A2bp1 + chr3L 10526695 intron A2bp1 + chr3L 10526755 intron A2bp1 + chr3L_4_10525001 chr3L_10525001 RAL-109_125b 2327 chr3L 10584230 10584301 chr3L 10584367 10584438 30 136 8.0 6.5 7.2 3.7 208 chr3L 10584230 intron A2bp1 + chr3L 10584334 intron A2bp1 + chr3L 10584438 intron A2bp1 + chr3L_30_10580001 chr3L_10580001 RAL-109_125b 2328 chr3L 10600406 10600476 chr3L 10600538 10600608 25 128 3.5 4.5 4.0 5.0 202 chr3L 10600406 intergenic not near genes chr3L 10600507 intergenic not near genes chr3L 10600608 intergenic not near genes chr3L_25_10600001 chr3L_10600001 RAL-109_125b 2329 chr3L 10601161 10601184 chr3L 10601304 10601327 7 141 13.0 6.0 9.5 0.7 166 chr3L 10601161 intergenic not near genes chr3L 10601244 intergenic not near genes chr3L 10601327 intergenic not near genes chr3L_7_10600001 chr3L_10600001 RAL-109_125b 2330 chr3L 10601186 10601229 chr3L 10601299 10601372 15 131 3.5 5.5 4.5 2.7 186 chr3L 10601186 intergenic not near genes chr3L 10601279 intergenic not near genes chr3L 10601372 intergenic not near genes chr3L_15_10600001 chr3L_10600001 RAL-109_125b 2331 chr3L 10607666 10607739 chr3L 10607803 10607842 18 125 7.0 7.0 7.0 2.2 176 chr3L 10607666 intergenic not near genes chr3L 10607754 intergenic not near genes chr3L 10607842 intergenic not near genes chr3L_18_10605001 chr3L_10605001 RAL-109_125b 2332 chr3L 10621819 10621871 chr3L 10621956 10622008 8 137 1.5 7.0 4.2 1.5 189 chr3L 10621819 intergenic not near genes chr3L 10621914 intergenic not near genes chr3L 10622008 intergenic not near genes chr3L_8_10620001 chr3L_10620001 RAL-109_125b 2333 chr3L 10658056 10658208 chr3L 10658183 10658375 30 160 0.0 0.0 0.0 30.0 319 chr3L 10658056 intron CG32066 - chr3L 10658216 intron CG32066 - chr3L 10658375 intron CG32066 - chr3L_30_10655001 chr3L_10655001 RAL-109_125b 2334 chr3L 10735786 10735827 chr3L 10735925 10735966 17 138 11.0 9.5 10.2 1.5 180 chr3L 10735786 intergenic not near genes chr3L 10735876 intergenic not near genes chr3L 10735966 intergenic not near genes chr3L_17_10735001 chr3L_10735001 RAL-109_125b 2335 chr3L 10739760 10739777 chr3L 10739894 10739911 9 133 8.0 0.0 4.0 1.8 151 chr3L 10739760 intergenic not near genes chr3L 10739836 intergenic not near genes chr3L 10739911 intergenic not near genes chr3L_9_10735001 chr3L_10735001 RAL-109_125b 2336 chr3L 10745492 10745557 chr3L 10745622 10745687 25 130 12.5 7.5 10.0 2.3 195 chr3L 10745492 intergenic not near genes chr3L 10745590 intergenic not near genes chr3L 10745687 intergenic not near genes chr3L_25_10745001 chr3L_10745001 RAL-109_125b 2337 chr3L 10762796 10762854 chr3L 10762916 10762973 20 123 6.0 10.5 8.2 2.2 177 chr3L 10762796 intergenic not near genes chr3L 10762884 intergenic not near genes chr3L 10762973 intergenic not near genes chr3L_20_10760001 chr3L_10760001 RAL-109_125b 2338 chr3L 10820492 10820519 chr3L 10820691 10820718 5 199 0.0 0.0 0.0 5.0 226 chr3L 10820492 intergenic not near genes chr3L 10820605 intergenic not near genes chr3L 10820718 intergenic not near genes chr3L_5_10820001 chr3L_10820001 RAL-109_125b 2339 chr3L 10842386 10842397 chr3L 10842516 10842522 4 129 7.0 0.0 3.5 0.9 136 chr3L 10842386 intergenic not near genes chr3L 10842454 intergenic not near genes chr3L 10842522 intergenic not near genes chr3L_4_10840001 chr3L_10840001 RAL-109_125b 2340 chr3L 10907916 10907947 chr3L 10908042 10908073 9 126 15.0 5.0 10.0 0.8 157 chr3L 10907916 intergenic not near genes chr3L 10907994 intergenic not near genes chr3L 10908073 intergenic not near genes chr3L_9_10905001 chr3L_10905001 RAL-109_125b 2341 chr3L 10919552 10919568 chr3L 10919776 10919792 4 224 2.0 0.0 1.0 2.0 240 chr3L 10919552 intergenic not near genes chr3L 10919672 intergenic not near genes chr3L 10919792 intergenic not near genes chr3L_4_10915001 chr3L_10915001 RAL-109_125b 2342 chr3L 10928133 10928172 chr3L 10928414 10928442 6 279 0.0 8.0 4.0 1.2 309 chr3L 10928133 intergenic not near genes chr3L 10928288 intergenic not near genes chr3L 10928442 intergenic not near genes chr3L_6_10925001 chr3L_10925001 RAL-109_125b 2343 chr3L 10940039 10940096 chr3L 10940145 10940162 13 93 5.0 5.0 5.0 2.2 123 chr3L 10940039 intergenic not near genes chr3L 10940100 intergenic not near genes chr3L 10940162 intergenic not near genes chr3L_13_10940001 chr3L_10940001 RAL-109_125b 2344 chr3L 10942025 10942071 chr3L 10942146 10942177 14 115 13.0 8.0 10.5 1.2 152 chr3L 10942025 intergenic not near genes chr3L 10942101 intergenic not near genes chr3L 10942177 intergenic not near genes chr3L_14_10940001 chr3L_10940001 RAL-109_125b 2345 chr3L 11053632 11053642 chr3L 11053771 11053782 7 140 11.0 0.0 5.5 1.1 150 chr3L 11053632 intergenic CG7888 + chr3L 11053707 intergenic CG7888 + chr3L 11053782 intergenic CG7888 + chr3L_7_11050001 chr3L_11050001 RAL-109_125b 2346 chr3L 11054171 11054204 chr3L 11054290 11054332 11 125 6.0 7.0 6.5 1.5 161 chr3L 11054171 5` UTR CG7888 + chr3L 11054252 5` UTR CG7888 + chr3L 11054332 5` UTR CG7888 + chr3L_11_11050001 chr3L_11050001 RAL-109_125b 2347 chr3L 11087016 11087090 chr3L 11088849 11088914 S-element 16 1835 2.5 3.5 3.0 4.0 1898 chr3L 11087016 intron JIL-1 - chr3L 11087965 intron JIL-1 - chr3L 11088914 intron JIL-1 - chr3L_16_11085001 chr3L_11085001 RAL-109_125b 2348 chr3L 11103440 11103448 chr3L 11103579 11103580 4 136 13.0 11.5 12.2 0.3 140 chr3L 11103440 exon CG32071 - chr3L 11103510 exon CG32071 - chr3L 11103580 exon CG32071 - chr3L_4_11100001 chr3L_11100001 RAL-109_125b 2349 chr3L 11104027 11104104 chr3L 11104156 11104235 8 131 5.5 0.5 3.0 2.0 208 chr3L 11104027 intergenic CG32071 - chr3L 11104131 intergenic CG32071 - chr3L 11104235 intergenic CG32071 - chr3L_8_11100001 chr3L_11100001 RAL-109_125b 2350 chr3L 11105248 11105319 chr3L 11107009 11107080 X-element 27 1758 7.5 5.5 6.5 3.6 1832 chr3L 11105248 intergenic not near genes chr3L 11106164 intergenic not near genes chr3L 11107080 exon CG32073 - chr3L_27_11105001 chr3L_11105001 RAL-109_125b 2351 chr3L 11134660 11134707 chr3L 11134787 11134834 13 127 8.5 11.5 10.0 1.2 174 chr3L 11134660 3` UTR CG42575 + chr3L 11134747 intergenic CG42575 +,CG14143 + chr3L 11134834 intergenic CG14143 +,CG42575 + chr3L_13_11130001 chr3L_11130001 RAL-109_125b 2352 chr3L 11135480 11135528 chr3L 11135760 11135806 13 279 8.5 0.0 4.2 2.5 326 chr3L 11135480 3` UTR CG14143 + chr3L 11135643 intergenic CG14143 +,CG32082 + chr3L 11135806 intergenic CG32082 +,CG14143 + chr3L_13_11135001 chr3L_11135001 RAL-109_125b 2353 chr3L 11145534 11145551 chr3L 11145666 11145689 10 137 0.0 8.5 4.2 1.9 155 chr3L 11145534 intron CG32082 + chr3L 11145612 intron CG32082 + chr3L 11145689 intron CG32082 + chr3L_10_11145001 chr3L_11145001 RAL-109_125b 2354 chr3L 11217476 11217536 chr3L 11217598 11217668 9 131 6.0 4.0 5.0 1.5 192 chr3L 11217476 intron CG42671 + chr3L 11217572 intron CG42671 + chr3L 11217668 intron CG42671 + chr3L_9_11215001 chr3L_11215001 RAL-109_125b 2355 chr3L 11224546 11224574 chr3L 11224717 11224745 13 170 0.0 13.0 6.5 1.7 199 chr3L 11224546 intron CG42671 + chr3L 11224646 intron CG42671 + chr3L 11224745 intron CG42671 + chr3L_13_11220001 chr3L_11220001 RAL-109_125b 2356 chr3L 11264434 11264492 chr3L 11271436 11271494 17.6 25 7000 8.0 9.0 8.5 2.6 7060 chr3L 11264434 intergenic not near genes chr3L 11267964 intergenic not near genes chr3L 11271494 intergenic not near genes chr3L_25_11265001 chr3L_11265001 RAL-109_125b 2357 chr3L 11302998 11303046 chr3L 11303134 11303182 7 136 6.5 0.0 3.2 1.7 184 chr3L 11302998 intergenic not near genes chr3L 11303090 intergenic not near genes chr3L 11303182 intergenic not near genes chr3L_7_11300001 chr3L_11300001 RAL-109_125b 2358 chr3L 11304566 11304625 chr3L 11304712 11304715 13 140 10.5 1.5 6.0 1.9 149 chr3L 11304566 intergenic not near genes chr3L 11304640 intergenic not near genes chr3L 11304715 intergenic not near genes chr3L_13_11300001 chr3L_11300001 RAL-109_125b 2359 chr3L 11329659 11329716 chr3L 11332914 11332955 jockey 17 3246 3.5 5.5 4.5 3.1 3296 chr3L 11329659 intergenic not near genes chr3L 11331307 intergenic not near genes chr3L 11332955 intergenic not near genes chr3L_17_11330001 chr3L_11330001 RAL-109_125b 2360 chr3L 11432868 11432924 chr3L 11432997 11433020 17 127 1.0 9.0 5.0 2.8 152 chr3L 11432868 intergenic not near genes chr3L 11432944 intergenic not near genes chr3L 11433020 intergenic not near genes chr3L_17_11430001 chr3L_11430001 RAL-109_125b 2361 chr3L 11435514 11435589 chr3L 11435733 11435788 37 214 6.0 10.0 8.0 4.1 274 chr3L 11435514 intergenic CG6149 -,CR44548 + chr3L 11435651 5` UTR CR44548 + chr3L 11435788 5` UTR CR44548 + chr3L_37_11435001 chr3L_11435001 RAL-109_125b 2362 chr3L 11441352 11441381 chr3L 11441481 11441510 5 129 0.0 7.0 3.5 1.1 158 chr3L 11441352 intergenic not near genes chr3L 11441431 intergenic not near genes chr3L 11441510 intergenic not near genes chr3L_5_11440001 chr3L_11440001 RAL-109_125b 2363 chr3L 11442734 11442795 chr3L 11442871 11442895 4 126 9.5 0.0 4.8 0.7 161 chr3L 11442734 intergenic not near genes chr3L 11442814 intergenic not near genes chr3L 11442895 intergenic not near genes chr3L_4_11440001 chr3L_11440001 RAL-109_125b 2364 chr3L 11456860 11456979 chr3L 11456978 11457135 17 190 0.0 0.0 0.0 17.0 275 chr3L 11456860 intergenic CG12289 - chr3L 11456998 intergenic CG12289 - chr3L 11457135 3` UTR CG12289 - chr3L_17_11455001 chr3L_11455001 RAL-109_125b 2365 chr3L 11491066 11491069 chr3L 11492907 11492920 7 1841 48.0 57.0 52.5 0.1 1854 chr3L 11491066 intron chrb + chr3L 11491993 intron chrb + chr3L 11492920 intron chrb + chr3L_7_11490001 chr3L_11490001 RAL-109_125b 2366 chr3L 11493103 11493168 chr3L 11493248 11493312 18 145 5.5 4.0 4.8 3.1 209 chr3L 11493103 intron chrb + chr3L 11493208 intron chrb + chr3L 11493312 intron chrb + chr3L_18_11490001 chr3L_11490001 RAL-109_125b 2367 chr3L 11499007 11499046 chr3L 11508217 11508256 roo 8 9210 10.5 4.5 7.5 0.9 9249 chr3L 11499007 3` UTR chrb + chr3L 11503632 intergenic not near genes chr3L 11508256 intergenic CG33500 + chr3L_8_11500001 chr3L_11500001 RAL-109_125b 2368 chr3L 11528180 11528256 chr3L 11528311 11528387 36 128 11.5 4.0 7.8 4.1 207 chr3L 11528180 intron Mob2 - chr3L 11528284 intron Mob2 - chr3L 11528387 intron Mob2 - chr3L_36_11525001 chr3L_11525001 RAL-109_125b 2369 chr3L 11612239 11612306 chr3L 11612377 11612447 8 137 32.0 38.0 35.0 0.2 208 chr3L 11612239 exon Muc68Ca - chr3L 11612343 exon Muc68Ca - chr3L 11612447 exon Muc68Ca - chr3L_8_11610001 chr3L_11610001 RAL-109_125b 2370 chr3L 11648466 11648520 chr3L 11648599 11648653 9 133 10.5 0.0 5.2 1.5 187 chr3L 11648466 5` UTR RIOK1 - chr3L 11648560 intergenic RIOK1 -,CG7339 + chr3L 11648653 intergenic CG7339 +,RIOK1 - chr3L_9_11645001 chr3L_11645001 RAL-109_125b 2371 chr3L 11663701 11663755 chr3L 11663875 11663930 18 173 8.5 3.0 5.8 2.6 229 chr3L 11663701 intron CG32085 - chr3L 11663816 intron CG32085 - chr3L 11663930 intron CG32085 - chr3L_18_11660001 chr3L_11660001 RAL-109_125b 2372 chr3L 11678052 11678124 chr3L 11678189 11678261 25 132 5.5 7.5 6.5 3.3 209 chr3L 11678052 intron CG32085 - chr3L 11678156 intron CG32085 - chr3L 11678261 intron CG32085 - chr3L_25_11675001 chr3L_11675001 RAL-109_125b 2373 chr3L 11723047 11723106 chr3L 11727892 11727951 Doc 24 4844 10.5 8.5 9.5 2.3 4904 chr3L 11723047 3` UTR Bmcp + chr3L 11725499 intron Bmcp + chr3L 11727951 3` UTR Bmcp + chr3L_24_11725001 chr3L_11725001 RAL-109_125b 2374 chr3L 11740095 11740153 chr3L 11740243 11740301 21 142 12.0 18.5 15.2 1.3 206 chr3L 11740095 intron CG6024 - chr3L 11740198 intron CG6024 - chr3L 11740301 intron CG6024 - chr3L_21_11740001 chr3L_11740001 RAL-109_125b 2375 chr3L 11743974 11743984 chr3L 11744132 11744142 6 157 20.0 1.0 10.5 0.5 168 chr3L 11743974 exon CG6024 - chr3L 11744058 intron CG6024 - chr3L 11744142 intron CG6024 - chr3L_6_11740001 chr3L_11740001 RAL-109_125b 2376 chr3L 11743991 11744046 chr3L 11744128 11744204 16 157 6.0 1.0 3.5 3.6 213 chr3L 11743991 exon CG6024 - chr3L 11744098 intron CG6024 - chr3L 11744204 intron CG6024 - chr3L_16_11740001 chr3L_11740001 RAL-109_125b 2377 chr3L 7749470 7749471 chr3L 11777678 11777678 4 4028207 17.5 29.5 23.5 0.2 4028208 chr3L 7749470 intron,3` UTR CG32373 +,CG13685 + chr3L 9763574 5` UTR CG8177 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_4_9760001 chr3L_9760001 RAL-109_125b 2378 chr3L 11777678 11777678 chr3L 12163305 12163305 6 385627 30.5 37.5 34.0 0.2 385627 chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L 11970492 exon Muc68E - chr3L 12163305 intron CG9760 - chr3L_6_11970001 chr3L_11970001 RAL-109_125b 2379 chr3L 11816776 11816806 chr3L 11816913 11816952 10 148 11.5 15.5 13.5 0.7 176 chr3L 11816776 3` UTR CG5946 - chr3L 11816864 3` UTR CG5946 - chr3L 11816952 3` UTR CG5946 - chr3L_10_11815001 chr3L_11815001 RAL-109_125b 2380 chr3L 11833677 11833698 chr3L 11833831 11833852 6 154 8.0 3.5 5.8 0.9 175 chr3L 11833677 intergenic CycA - chr3L 11833764 intergenic CycA - chr3L 11833852 intergenic CycA - chr3L_6_11830001 chr3L_11830001 RAL-109_125b 2381 chr3L 11846363 11846369 chr3L 11846521 11846527 4 158 7.0 7.5 7.2 0.5 164 chr3L 11846363 intergenic not near genes chr3L 11846445 intergenic not near genes chr3L 11846527 intergenic not near genes chr3L_4_11845001 chr3L_11845001 RAL-109_125b 2382 chr3L 11846372 11846416 chr3L 11846514 11846571 9 156 4.0 6.0 5.0 1.5 199 chr3L 11846372 intergenic not near genes chr3L 11846472 intergenic not near genes chr3L 11846571 intergenic not near genes chr3L_9_11845001 chr3L_11845001 RAL-109_125b 2383 chr3L 11850094 11850154 chr3L 11850238 11850299 21 139 7.5 0.0 3.8 4.4 205 chr3L 11850094 intergenic not near genes chr3L 11850196 intergenic CG44837 - chr3L 11850299 intergenic CG44837 - chr3L_21_11850001 chr3L_11850001 RAL-109_125b 2384 chr3L 11864504 11864579 chr3L 11865849 11865924 pogo 27 1342 6.5 8.0 7.2 3.3 1420 chr3L 11864504 intron CG44837 - chr3L 11865214 intron CG44837 - chr3L 11865924 intron CG44837 - chr3L_27_11865001 chr3L_11865001 RAL-109_125b 2385 chr3L 11903890 11903896 chr3L 11904017 11904023 5 127 1.0 0.5 0.8 2.8 133 chr3L 11903890 intron CG44837 - chr3L 11903956 intron CG44837 - chr3L 11904023 intron CG44837 - chr3L_5_11900001 chr3L_11900001 RAL-109_125b 2386 chr3L 11943445 11943521 chr3L 11943596 11943672 30 150 5.0 7.0 6.0 4.3 227 chr3L 11943445 3` UTR Rpt4R + chr3L 11943558 intergenic Rpt4R +,CG5883 - chr3L 11943672 3` UTR CG5883 - chr3L_30_11940001 chr3L_11940001 RAL-109_125b 2387 chr3L 12013865 12013929 chr3L 12014006 12014065 30 139 7.0 5.5 6.2 4.2 200 chr3L 12013865 intron rols - chr3L 12013965 intron rols - chr3L 12014065 intron rols - chr3L_30_12010001 chr3L_12010001 RAL-109_125b 2388 chr3L 12032891 12032956 chr3L 12033013 12033083 10 123 6.5 0.0 3.2 2.4 192 chr3L 12032891 intron,3` UTR rols -,CG43993 + chr3L 12032987 intron,3` UTR rols -,CG43993 + chr3L 12033083 intron rols - chr3L_10_12030001 chr3L_12030001 RAL-109_125b 2389 chr3L 12034858 12034898 chr3L 12034965 12035025 13 125 5.5 5.0 5.2 2.1 167 chr3L 12034858 intron rols - chr3L 12034942 intron rols - chr3L 12035025 intron rols - chr3L_13_12030001 chr3L_12030001 RAL-109_125b 2390 chr3L 12052668 12052735 chr3L 12052807 12052874 20 135 5.0 12.5 8.8 2.0 206 chr3L 12052668 intron rols - chr3L 12052771 intron rols - chr3L 12052874 intron rols - chr3L_20_12050001 chr3L_12050001 RAL-109_125b 2391 chr3L 12075383 12075418 chr3L 12075522 12075532 7 134 11.0 0.5 5.8 1.0 149 chr3L 12075383 intron Sema-5c - chr3L 12075458 intron Sema-5c - chr3L 12075532 intron Sema-5c - chr3L_7_12075001 chr3L_12075001 RAL-109_125b 2392 chr3L 12075425 12075448 chr3L 12075519 12075582 7 128 6.5 0.5 3.5 1.6 157 chr3L 12075425 intron Sema-5c - chr3L 12075504 intron Sema-5c - chr3L 12075582 intron Sema-5c - chr3L_7_12075001 chr3L_12075001 RAL-109_125b 2393 chr3L 12089031 12089111 chr3L 12089161 12089236 31 130 8.0 6.0 7.0 3.9 205 chr3L 12089031 exon CG17154 + chr3L 12089134 3` UTR CG17154 + chr3L 12089236 intergenic CG17154 + chr3L_31_12085001 chr3L_12085001 RAL-109_125b 2394 chr3L 12091783 12091802 chr3L 12091930 12091988 7 178 6.0 6.5 6.2 1.0 205 chr3L 12091783 intergenic not near genes chr3L 12091886 intergenic not near genes chr3L 12091988 intergenic not near genes chr3L_7_12090001 chr3L_12090001 RAL-109_125b 2395 chr3L 12119715 12119783 chr3L 12119862 12119930 26 147 8.0 6.0 7.0 3.2 215 chr3L 12119715 3` UTR ssp + chr3L 12119822 intergenic ssp +,CG11560 + chr3L 12119930 intergenic CG11560 +,ssp + chr3L_26_12115001 chr3L_12115001 RAL-109_125b 2396 chr3L 12186365 12186397 chr3L 12186531 12186563 15 163 7.0 8.0 7.5 1.8 198 chr3L 12186365 intron CG6910 + chr3L 12186464 intron CG6910 + chr3L 12186563 exon CG6910 + chr3L_15_12185001 chr3L_12185001 RAL-109_125b 2397 chr3L 12231377 12231441 chr3L 12231626 12231700 31 251 64.0 60.0 62.0 0.5 323 chr3L 12231377 intron app - chr3L 12231538 intron app - chr3L 12231700 intron app - chr3L_31_12230001 chr3L_12230001 RAL-109_125b 2398 chr3L 12290207 12290285 chr3L 12290347 12290429 6 138 0.5 0.0 0.2 5.0 222 chr3L 12290207 intergenic CR45658 - chr3L 12290318 intergenic CR45658 - chr3L 12290429 intergenic CR45658 - chr3L_6_12290001 chr3L_12290001 RAL-109_125b 2399 chr3L 12297457 12297473 chr3L 12297667 12297683 6 210 3.5 0.0 1.8 2.1 226 chr3L 12297457 intergenic not near genes chr3L 12297570 intergenic not near genes chr3L 12297683 intergenic not near genes chr3L_6_12295001 chr3L_12295001 RAL-109_125b 2400 chr3L 12318612 12318630 chr3L 12318750 12318768 11 135 9.5 20.0 14.8 0.7 156 chr3L 12318612 intergenic not near genes chr3L 12318690 intergenic not near genes chr3L 12318768 intergenic not near genes chr3L_11_12315001 chr3L_12315001 RAL-109_125b 2401 chr3L 12318648 12318656 chr3L 12318728 12318769 4 105 5.0 12.5 8.8 0.4 121 chr3L 12318648 intergenic not near genes chr3L 12318708 intergenic not near genes chr3L 12318769 intergenic not near genes chr3L_4_12315001 chr3L_12315001 RAL-109_125b 2402 chr3L 12387992 12388010 chr3L 12388119 12388132 8 126 0.0 12.0 6.0 1.1 140 chr3L 12387992 intron Ncc69 - chr3L 12388062 intron Ncc69 - chr3L 12388132 intron Ncc69 - chr3L_8_12385001 chr3L_12385001 RAL-109_125b 2403 chr3L 12458486 12458506 chr3L 12458587 12458655 6 141 3.5 5.5 4.5 1.1 169 chr3L 12458486 intergenic not near genes chr3L 12458570 intergenic not near genes chr3L 12458655 intergenic not near genes chr3L_6_12455001 chr3L_12455001 RAL-109_125b 2404 chr3L 12476238 12476316 chr3L 12476365 12476442 27 126 1.0 7.5 4.2 5.2 204 chr3L 12476238 intron CG10663 - chr3L 12476340 intron CG10663 - chr3L 12476442 intron CG10663 - chr3L_27_12475001 chr3L_12475001 RAL-109_125b 2405 chr3L 12491679 12491710 chr3L 12491812 12491843 4 133 0.0 9.0 4.5 0.7 164 chr3L 12491679 intergenic CG10657 -,CR45682 +,CR45681 + chr3L 12491761 intergenic CG10657 -,CR45682 + chr3L 12491843 3` UTR,5` UTR CG10657 -,CR45682 + chr3L_4_12490001 chr3L_12490001 RAL-109_125b 2406 chr3L 12587308 12587349 chr3L 12587441 12587482 5 133 7.0 0.0 3.5 1.1 174 chr3L 12587308 intron ara + chr3L 12587395 intron ara + chr3L 12587482 intron ara + chr3L_5_12585001 chr3L_12585001 RAL-109_125b 2407 chr3L 12610951 12611021 chr3L 12611247 12611317 22 296 0.5 8.5 4.5 4.0 366 chr3L 12610951 intron caup + chr3L 12611134 intron caup + chr3L 12611317 intron caup + chr3L_22_12610001 chr3L_12610001 RAL-109_125b 2408 chr3L 12620971 12620983 chr3L 12621072 12621097 4 116 18.5 16.0 17.2 0.2 126 chr3L 12620971 3` UTR caup + chr3L 12621034 3` UTR caup + chr3L 12621097 3` UTR caup + chr3L_4_12620001 chr3L_12620001 RAL-109_125b 2409 chr3L 12626119 12626161 chr3L 12626272 12626320 21 158 5.0 0.0 2.5 6.0 201 chr3L 12626119 intergenic not near genes chr3L 12626220 intergenic not near genes chr3L 12626320 intergenic not near genes chr3L_21_12625001 chr3L_12625001 RAL-109_125b 2410 chr3L 12676095 12676173 chr3L 12676250 12676292 18 150 5.0 0.0 2.5 5.1 197 chr3L 12676095 intergenic not near genes chr3L 12676194 intergenic not near genes chr3L 12676292 intergenic not near genes chr3L_18_12675001 chr3L_12675001 RAL-109_125b 2411 chr3L 12720286 12720352 chr3L 12720421 12720487 28 134 6.5 12.0 9.2 2.7 201 chr3L 12720286 intergenic not near genes chr3L 12720386 intergenic not near genes chr3L 12720487 intergenic not near genes chr3L_28_12720001 chr3L_12720001 RAL-109_125b 2412 chr3L 12722254 12722285 chr3L 12722386 12722401 13 127 4.0 7.0 5.5 2.0 147 chr3L 12722254 intergenic not near genes chr3L 12722328 intergenic not near genes chr3L 12722401 intergenic not near genes chr3L_13_12720001 chr3L_12720001 RAL-109_125b 2413 chr3L 12727985 12728042 chr3L 12728119 12728176 12 134 7.0 9.0 8.0 1.3 191 chr3L 12727985 intergenic not near genes chr3L 12728080 intergenic not near genes chr3L 12728176 intergenic not near genes chr3L_12_12725001 chr3L_12725001 RAL-109_125b 2414 chr3L 12801935 12802007 chr3L 12802060 12802133 21 123 6.0 4.0 5.0 3.5 198 chr3L 12801935 intron Atg1 - chr3L 12802034 intron Atg1 - chr3L 12802133 intron Atg1 - chr3L_21_12800001 chr3L_12800001 RAL-109_125b 2415 chr3L 12874887 12874953 chr3L 12877229 12877231 jockey 22 2338 15.0 9.5 12.2 1.7 2344 chr3L 12874887 intergenic not near genes chr3L 12876059 intergenic not near genes chr3L 12877231 intergenic not near genes chr3L_22_12875001 chr3L_12875001 RAL-109_125b 2416 chr3L 12894763 12894806 chr3L 12894891 12894927 18 126 12.0 13.0 12.5 1.3 164 chr3L 12894763 intergenic CG14118 + chr3L 12894845 intergenic CG14118 + chr3L 12894927 intergenic CG14118 + chr3L_18_12890001 chr3L_12890001 RAL-109_125b 2417 chr3L 12919228 12919262 chr3L 12924751 12924778 Rt1c 8 5516 14.5 7.5 11.0 0.7 5550 chr3L 12919228 intergenic not near genes chr3L 12922003 intergenic not near genes chr3L 12924778 intergenic not near genes chr3L_8_12920001 chr3L_12920001 RAL-109_125b 2418 chr3L 12926580 12926644 chr3L 12926709 12926773 26 127 11.0 10.0 10.5 2.3 193 chr3L 12926580 intergenic not near genes chr3L 12926676 intergenic not near genes chr3L 12926773 intergenic not near genes chr3L_26_12925001 chr3L_12925001 RAL-109_125b 2419 chr3L 12929715 12929744 chr3L 12930061 12930110 13 363 0.0 13.0 6.5 1.7 395 chr3L 12929715 intergenic not near genes chr3L 12929912 intergenic not near genes chr3L 12930110 intergenic not near genes chr3L_13_12925001 chr3L_12925001 RAL-109_125b 2420 chr3L 12936628 12936696 chr3L 12936764 12936831 20 127 6.5 5.5 6.0 2.9 203 chr3L 12936628 intergenic not near genes chr3L 12936730 intergenic not near genes chr3L 12936831 intergenic not near genes chr3L_20_12935001 chr3L_12935001 RAL-109_125b 2421 chr3L 12943817 12943843 chr3L 12943971 12943997 7 154 13.0 0.0 6.5 0.9 180 chr3L 12943817 intergenic not near genes chr3L 12943907 intergenic not near genes chr3L 12943997 intergenic not near genes chr3L_7_12940001 chr3L_12940001 RAL-109_125b 2422 chr3L 12957741 12957810 chr3L 12962273 12962342 copia 31 4528 8.5 12.5 10.5 2.7 4601 chr3L 12957741 intergenic not near genes chr3L 12960042 intergenic not near genes chr3L 12962342 intergenic not near genes chr3L_31_12960001 chr3L_12960001 RAL-109_125b 2423 chr3L 12967087 12967166 chr3L 12967221 12967274 32 129 8.0 6.5 7.2 3.9 187 chr3L 12967087 exon Or69a - chr3L 12967180 exon Or69a - chr3L 12967274 exon Or69a - chr3L_32_12965001 chr3L_12965001 RAL-109_125b 2424 chr3L 12978717 12978782 chr3L 12978846 12978911 14 129 8.5 0.0 4.2 2.7 194 chr3L 12978717 intergenic not near genes chr3L 12978814 intergenic not near genes chr3L 12978911 intergenic not near genes chr3L_14_12975001 chr3L_12975001 RAL-109_125b 2425 chr3L 12984274 12984336 chr3L 12984412 12984474 24 141 7.5 4.5 6.0 3.4 200 chr3L 12984274 intergenic not near genes chr3L 12984374 intergenic not near genes chr3L 12984474 intergenic not near genes chr3L_24_12980001 chr3L_12980001 RAL-109_125b 2426 chr3L 12990945 12990997 chr3L 12991319 12991381 12 387 7.5 8.5 8.0 1.3 436 chr3L 12990945 intergenic not near genes chr3L 12991163 intergenic not near genes chr3L 12991381 intergenic not near genes chr3L_12_12990001 chr3L_12990001 RAL-109_125b 2427 chr3L 12991588 12991658 chr3L 12991776 12991846 29 188 4.5 8.0 6.2 4.0 258 chr3L 12991588 intergenic not near genes chr3L 12991717 intergenic not near genes chr3L 12991846 intergenic not near genes chr3L_29_12990001 chr3L_12990001 RAL-109_125b 2428 chr3L 13007644 13007725 chr3L 13007773 13007860 29 127 4.5 3.0 3.8 6.0 216 chr3L 13007644 exon CG11263 + chr3L 13007752 3` UTR CG11263 + chr3L 13007860 3` UTR CG11263 + chr3L_29_13005001 chr3L_13005001 RAL-109_125b 2429 chr3L 13050524 13050598 chr3L 13050653 13050697 26 124 5.0 7.0 6.0 3.7 173 chr3L 13050524 intergenic not near genes chr3L 13050610 intergenic not near genes chr3L 13050697 intergenic not near genes chr3L_26_13050001 chr3L_13050001 RAL-109_125b 2430 chr3L 13055974 13056011 chr3L 13056066 13056098 17 111 9.0 5.5 7.2 2.1 124 chr3L 13055974 intergenic not near genes chr3L 13056036 intergenic not near genes chr3L 13056098 intergenic not near genes chr3L_17_13055001 chr3L_13055001 RAL-109_125b 2431 chr3L 13159240 13159296 chr3L 13159369 13159423 6 128 2.0 4.5 3.2 1.4 183 chr3L 13159240 intergenic not near genes chr3L 13159332 intergenic not near genes chr3L 13159423 intergenic not near genes chr3L_6_13155001 chr3L_13155001 RAL-109_125b 2432 chr3L 13264743 13264758 chr3L 13264869 13264878 8 125 13.0 4.0 8.5 0.8 135 chr3L 13264743 intron caps + chr3L 13264810 intron caps + chr3L 13264878 intron caps + chr3L_8_13260001 chr3L_13260001 RAL-109_125b 2433 chr3L 13267240 13267305 chr3L 13267403 13267458 12 158 6.5 7.0 6.8 1.5 218 chr3L 13267240 intron caps + chr3L 13267349 intron caps + chr3L 13267458 intron caps + chr3L_12_13265001 chr3L_13265001 RAL-109_125b 2434 chr3L 13296469 13296541 chr3L 13296610 13296682 30 141 8.5 6.5 7.5 3.5 213 chr3L 13296469 intergenic Sfp70A4 - chr3L 13296576 3` UTR Sfp70A4 - chr3L 13296682 3` UTR Sfp70A4 - chr3L_30_13295001 chr3L_13295001 RAL-109_125b 2435 chr3L 13314563 13314607 chr3L 13314695 13314740 17 131 5.5 7.0 6.2 2.4 177 chr3L 13314563 intergenic not near genes chr3L 13314652 intergenic not near genes chr3L 13314740 intergenic not near genes chr3L_17_13310001 chr3L_13310001 RAL-109_125b 2436 chr3L 13315810 13315858 chr3L 13315947 13315995 6 137 4.5 1.5 3.0 1.5 185 chr3L 13315810 intergenic not near genes chr3L 13315902 intergenic not near genes chr3L 13315995 intergenic not near genes chr3L_6_13315001 chr3L_13315001 RAL-109_125b 2437 chr3L 13337137 13337158 chr3L 13337273 13337299 11 140 1.5 6.0 3.8 2.3 162 chr3L 13337137 intergenic not near genes chr3L 13337218 intergenic not near genes chr3L 13337299 intergenic not near genes chr3L_11_13335001 chr3L_13335001 RAL-109_125b 2438 chr3L 13432245 13432320 chr3L 13432394 13432449 28 147 4.0 6.0 5.0 4.7 204 chr3L 13432245 intron CG10713 - chr3L 13432347 intron CG10713 - chr3L 13432449 intron CG10713 - chr3L_28_13430001 chr3L_13430001 RAL-109_125b 2439 chr3L 13525113 13525171 chr3L 13532959 13533017 roo 20 7844 13.5 8.0 10.8 1.7 7904 chr3L 13525113 intergenic not near genes chr3L 13529065 intergenic not near genes chr3L 13533017 intergenic not near genes chr3L_20_13525001 chr3L_13525001 RAL-109_125b 2440 chr3L 13535890 13535929 chr3L 13535983 13536055 14 121 10.0 8.5 9.2 1.4 165 chr3L 13535890 intergenic not near genes chr3L 13535972 intergenic not near genes chr3L 13536055 intergenic not near genes chr3L_14_13535001 chr3L_13535001 RAL-109_125b 2441 chr3L 13626660 13626720 chr3L 13626787 13626835 27 131 4.5 7.5 6.0 3.9 175 chr3L 13626660 intron bru-3 - chr3L 13626748 intron bru-3 - chr3L 13626835 intron bru-3 - chr3L_27_13625001 chr3L_13625001 RAL-109_125b 2442 chr3L 13629479 13629541 chr3L 13629640 13629702 20 160 5.0 13.5 9.2 2.0 223 chr3L 13629479 intron bru-3 - chr3L 13629590 intron bru-3 - chr3L 13629702 intron bru-3 - chr3L_20_13625001 chr3L_13625001 RAL-109_125b 2443 chr3L 13633363 13633443 chr3L 13633767 13633846 22 398 4.5 6.0 5.2 3.5 483 chr3L 13633363 intron bru-3 - chr3L 13633604 intron bru-3 - chr3L 13633846 intron bru-3 - chr3L_22_13630001 chr3L_13630001 RAL-109_125b 2444 chr3L 13648859 13648918 chr3L 13648981 13649052 21 132 2.0 3.0 2.5 6.0 193 chr3L 13648859 intron bru-3 - chr3L 13648956 intron bru-3 - chr3L 13649052 intron bru-3 - chr3L_21_13645001 chr3L_13645001 RAL-109_125b 2445 chr3L 13677482 13677496 chr3L 13677609 13677623 5 127 10.5 4.5 7.5 0.6 141 chr3L 13677482 intron bru-3 - chr3L 13677552 intron bru-3 - chr3L 13677623 intron bru-3 - chr3L_5_13675001 chr3L_13675001 RAL-109_125b 2446 chr3L 13677497 13677555 chr3L 13677605 13677682 17 124 5.0 5.5 5.2 2.7 185 chr3L 13677497 intron bru-3 - chr3L 13677590 intron bru-3 - chr3L 13677682 intron bru-3 - chr3L_17_13675001 chr3L_13675001 RAL-109_125b 2447 chr3L 13726749 13726765 chr3L 13726920 13726936 6 171 7.5 15.5 11.5 0.5 187 chr3L 13726749 intron bru-3 - chr3L 13726842 intron bru-3 - chr3L 13726936 intron bru-3 - chr3L_6_13725001 chr3L_13725001 RAL-109_125b 2448 chr3L 13775193 13775251 chr3L 13775602 13775675 21 423 7.0 3.5 5.2 3.4 482 chr3L 13775193 intron bru-3 - chr3L 13775434 intron bru-3 - chr3L 13775675 intron bru-3 - chr3L_21_13775001 chr3L_13775001 RAL-109_125b 2449 chr3L 13804508 13804566 chr3L 13822843 13822902 roo 27 18334 8.5 11.0 9.8 2.5 18394 chr3L 13804508 intergenic not near genes chr3L 13813705 intergenic not near genes chr3L 13822902 intergenic not near genes chr3L_27_13810001 chr3L_13810001 RAL-109_125b 2450 chr3L 13834301 13834348 chr3L 13834447 13834489 26 154 13.5 7.0 10.2 2.3 188 chr3L 13834301 intergenic not near genes chr3L 13834395 intergenic not near genes chr3L 13834489 intergenic not near genes chr3L_26_13830001 chr3L_13830001 RAL-109_125b 2451 chr3L 13841125 13841157 chr3L 13841251 13841286 6 134 0.0 6.5 3.2 1.4 161 chr3L 13841125 3` UTR CG8757 - chr3L 13841206 3` UTR CG8757 - chr3L 13841286 exon CG8757 - chr3L_6_13840001 chr3L_13840001 RAL-109_125b 2452 chr3L 13884335 13884387 chr3L 13884476 13884528 22 141 12.0 4.5 8.2 2.4 193 chr3L 13884335 intron dysc - chr3L 13884432 intron dysc - chr3L 13884528 intron dysc - chr3L_22_13880001 chr3L_13880001 RAL-109_125b 2453 chr3L 13898172 13898251 chr3L 13898306 13898385 22 134 5.0 9.5 7.2 2.7 213 chr3L 13898172 intron dysc - chr3L 13898278 intron dysc - chr3L 13898385 intron dysc - chr3L_22_13895001 chr3L_13895001 RAL-109_125b 2454 chr3L 13901521 13901590 chr3L 13901648 13901701 20 124 6.5 3.5 5.0 3.3 180 chr3L 13901521 intron dysc - chr3L 13901611 intron dysc - chr3L 13901701 5` UTR dysc - chr3L_20_13900001 chr3L_13900001 RAL-109_125b 2455 chr3L 13920369 13920433 chr3L 13920499 13920563 25 130 7.0 5.5 6.2 3.5 194 chr3L 13920369 intron Rgl - chr3L 13920466 intron Rgl - chr3L 13920563 intron Rgl - chr3L_25_13920001 chr3L_13920001 RAL-109_125b 2456 chr3L 13931297 13931369 chr3L 13931443 13931524 14 154 4.0 3.0 3.5 3.1 227 chr3L 13931297 intron Gl + chr3L 13931410 intron Gl + chr3L 13931524 intron Gl + chr3L_14_13930001 chr3L_13930001 RAL-109_125b 2457 chr3L 13936451 13936652 chr3L 13936580 13936837 20 162 0.0 0.0 0.0 20.0 386 chr3L 13936451 intergenic not near genes chr3L 13936644 intergenic not near genes chr3L 13936837 intergenic not near genes chr3L_20_13935001 chr3L_13935001 RAL-109_125b 2458 chr3L 13939827 13939834 chr3L 13939972 13939979 5 145 5.5 11.5 8.5 0.5 152 chr3L 13939827 intron CG32137 + chr3L 13939903 intron CG32137 + chr3L 13939979 intron CG32137 + chr3L_5_13935001 chr3L_13935001 RAL-109_125b 2459 chr3L 13954423 13954436 chr3L 13954552 13954564 4 129 8.0 12.5 10.2 0.4 141 chr3L 13954423 intron CG32137 + chr3L 13954494 intron CG32137 + chr3L 13954564 intron CG32137 + chr3L_4_13950001 chr3L_13950001 RAL-109_125b 2460 chr3L 13957834 13957903 chr3L 13958077 13958146 29 238 6.5 7.0 6.8 3.7 312 chr3L 13957834 intron CG32137 + chr3L 13957990 intron CG32137 + chr3L 13958146 intron CG32137 + chr3L_29_13955001 chr3L_13955001 RAL-109_125b 2461 chr3L 13988425 13988496 chr3L 13988596 13988667 21 171 7.5 7.0 7.2 2.6 242 chr3L 13988425 intron,exon CG17364 -,CG9040 + chr3L 13988546 intron,3` UTR CG17364 -,CG9040 + chr3L 13988667 intron CG17364 - chr3L_21_13985001 chr3L_13985001 RAL-109_125b 2462 chr3L 13993960 13994015 chr3L 13994090 13994145 9 130 6.5 5.5 6.0 1.3 185 chr3L 13993960 intergenic 26-29-p + chr3L 13994052 intergenic 26-29-p + chr3L 13994145 intergenic 26-29-p + chr3L_9_13990001 chr3L_13990001 RAL-109_125b 2463 chr3L 14036633 14036642 chr3L 14036776 14036785 5 143 21.0 10.5 15.8 0.3 152 chr3L 14036633 3` UTR,exon pncr014:3L -,CG6661 + chr3L 14036709 3` UTR,3` UTR pncr014:3L -,CG6661 + chr3L 14036785 3` UTR pncr014:3L - chr3L_5_14035001 chr3L_14035001 RAL-109_125b 2464 chr3L 14036645 14036663 chr3L 14036775 14036806 9 140 17.0 10.5 13.8 0.6 161 chr3L 14036645 3` UTR,exon pncr014:3L -,CG6661 + chr3L 14036726 3` UTR,3` UTR pncr014:3L -,CG6661 + chr3L 14036806 3` UTR pncr014:3L - chr3L_9_14035001 chr3L_14035001 RAL-109_125b 2465 chr3L 14036664 14036696 chr3L 14036768 14036839 16 137 8.0 9.5 8.8 1.6 175 chr3L 14036664 3` UTR,exon pncr014:3L -,CG6661 + chr3L 14036752 3` UTR pncr014:3L - chr3L 14036839 intergenic pncr014:3L -,CG6661 +,Hsc70Cb + chr3L_16_14035001 chr3L_14035001 RAL-109_125b 2466 chr3L 14061619 14061691 chr3L 14061758 14061827 10 134 5.5 2.5 4.0 2.0 208 chr3L 14061619 intron CG32138 + chr3L 14061723 intron CG32138 + chr3L 14061827 intron CG32138 + chr3L_10_14060001 chr3L_14060001 RAL-109_125b 2467 chr3L 14076025 14076082 chr3L 14076153 14076205 8 127 0.0 1.0 0.5 5.3 180 chr3L 14076025 3` UTR,5` UTR Pex1 +,btl + chr3L 14076115 3` UTR,intron Pex1 +,btl + chr3L 14076205 intron btl + chr3L_8_14075001 chr3L_14075001 RAL-109_125b 2468 chr3L 14107218 14107284 chr3L 14107344 14107402 13 125 9.0 1.5 5.2 2.1 184 chr3L 14107218 intron Sox21a - chr3L 14107310 intron Sox21a - chr3L 14107402 intron Sox21a - chr3L_13_14105001 chr3L_14105001 RAL-109_125b 2469 chr3L 14174071 14174090 chr3L 14174197 14174216 8 126 16.0 8.0 12.0 0.6 145 chr3L 14174071 intergenic not near genes chr3L 14174144 intergenic not near genes chr3L 14174216 intergenic not near genes chr3L_8_14170001 chr3L_14170001 RAL-109_125b 2470 chr3L 14185123 14185180 chr3L 14185249 14185276 12 117 9.5 9.5 9.5 1.1 153 chr3L 14185123 intergenic not near genes chr3L 14185200 intergenic not near genes chr3L 14185276 intergenic not near genes chr3L_12_14185001 chr3L_14185001 RAL-109_125b 2471 chr3L 14194674 14194736 chr3L 14194800 14194862 22 124 7.5 1.0 4.2 4.2 188 chr3L 14194674 intron nuf + chr3L 14194768 intron nuf + chr3L 14194862 intron nuf + chr3L_22_14190001 chr3L_14190001 RAL-109_125b 2472 chr3L 14245525 14245594 chr3L 14245669 14245738 1360 17 140 12.5 7.0 9.8 1.6 213 chr3L 14245525 3` UTR CR44561 - chr3L 14245632 3` UTR CR44561 - chr3L 14245738 intergenic CR44561 -,CR44560 + chr3L_17_14245001 chr3L_14245001 RAL-109_125b 2473 chr3L 14295944 14295970 chr3L 14296473 14296493 roo 16 528 17.5 9.5 13.5 1.1 549 chr3L 14295944 intron fz + chr3L 14296218 intron fz + chr3L 14296493 intron fz + chr3L_16_14295001 chr3L_14295001 RAL-109_125b 2474 chr3L 14295979 14296003 chr3L 14296470 14296539 roo 12 531 9.0 9.0 9.0 1.2 560 chr3L 14295979 intron fz + chr3L 14296259 intron fz + chr3L 14296539 intron fz + chr3L_12_14295001 chr3L_14295001 RAL-109_125b 2475 chr3L 14312005 14312021 chr3L 14316846 14316885 X-element 5 4850 10.5 11.5 11.0 0.4 4880 chr3L 14312005 exon fz + chr3L 14314445 intron fz + chr3L 14316885 intron fz + chr3L_5_14310001 chr3L_14310001 RAL-109_125b 2476 chr3L 14312022 14312053 chr3L 14316839 14316856 X-element 9 4840 4.0 10.5 7.2 1.1 4834 chr3L 14312022 exon fz + chr3L 14314439 intron fz + chr3L 14316856 intron fz + chr3L_9_14310001 chr3L_14310001 RAL-109_125b 2477 chr3L 14348866 14348930 chr3L 14348999 14349042 15 131 0.0 5.5 2.8 3.9 176 chr3L 14348866 intron fz + chr3L 14348954 intron fz + chr3L 14349042 intron fz + chr3L_15_14345001 chr3L_14345001 RAL-109_125b 2478 chr3L 14353779 14353850 chr3L 14354266 14354313 25 484 7.5 6.5 7.0 3.1 534 chr3L 14353779 intron fz + chr3L 14354046 intron fz + chr3L 14354313 intron fz + chr3L_25_14350001 chr3L_14350001 RAL-109_125b 2479 chr3L 14356481 14356551 chr3L 14356601 14356681 26 126 9.0 7.0 8.0 2.9 200 chr3L 14356481 intron fz + chr3L 14356581 intron fz + chr3L 14356681 intron fz + chr3L_26_14355001 chr3L_14355001 RAL-109_125b 2480 chr3L 14392158 14392182 chr3L 14392290 14392314 12 132 5.5 0.0 2.8 3.2 156 chr3L 14392158 intergenic not near genes chr3L 14392236 intergenic not near genes chr3L 14392314 intergenic not near genes chr3L_12_14390001 chr3L_14390001 RAL-109_125b 2481 chr3L 14399135 14399149 chr3L 14399274 14399278 4 136 16.5 0.0 8.2 0.4 143 chr3L 14399135 intergenic not near genes chr3L 14399206 intergenic not near genes chr3L 14399278 intergenic not near genes chr3L_4_14395001 chr3L_14395001 RAL-109_125b 2482 chr3L 14411817 14411884 chr3L 14411946 14412013 29 128 9.0 6.0 7.5 3.4 196 chr3L 14411817 intron CG3919 + chr3L 14411915 intron CG3919 + chr3L 14412013 intron CG3919 + chr3L_29_14410001 chr3L_14410001 RAL-109_125b 2483 chr3L 14417535 14417576 chr3L 14417656 14417717 6 134 7.0 7.5 7.2 0.7 182 chr3L 14417535 intron bbg - chr3L 14417626 intron bbg - chr3L 14417717 intron bbg - chr3L_6_14415001 chr3L_14415001 RAL-109_125b 2484 chr3L 14440718 14440770 chr3L 14440853 14440905 17 135 3.5 5.0 4.2 3.3 187 chr3L 14440718 intron bbg - chr3L 14440812 intron bbg - chr3L 14440905 intron bbg - chr3L_17_14440001 chr3L_14440001 RAL-109_125b 2485 chr3L 14453658 14453698 chr3L 14453791 14453831 10 133 3.5 7.0 5.2 1.6 173 chr3L 14453658 intron bbg - chr3L 14453744 intron bbg - chr3L 14453831 intron bbg - chr3L_10_14450001 chr3L_14450001 RAL-109_125b 2486 chr3L 14458883 14458955 chr3L 14459010 14459082 17 124 7.0 6.0 6.5 2.3 199 chr3L 14458883 intron bbg - chr3L 14458982 intron bbg - chr3L 14459082 intron bbg - chr3L_17_14455001 chr3L_14455001 RAL-109_125b 2487 chr3L 14468403 14468472 chr3L 14473659 14473728 copia 21 5256 4.0 8.0 6.0 3.0 5325 chr3L 14468403 intron bbg - chr3L 14471066 intron bbg - chr3L 14473728 intron bbg - chr3L_21_14470001 chr3L_14470001 RAL-109_125b 2488 chr3L 14486136 14486165 chr3L 14486263 14486292 5 127 0.0 15.0 7.5 0.6 156 chr3L 14486136 intron bbg - chr3L 14486214 intron bbg - chr3L 14486292 intron bbg - chr3L_5_14485001 chr3L_14485001 RAL-109_125b 2489 chr3L 14524277 14524339 chr3L 14529089 14529151 F-element 16 4811 9.0 8.0 8.5 1.7 4874 chr3L 14524277 intron bbg - chr3L 14526714 intron bbg - chr3L 14529151 intron bbg - chr3L_16_14525001 chr3L_14525001 RAL-109_125b 2490 chr3L 14534738 14534756 chr3L 14534844 14534883 9 125 6.0 4.0 5.0 1.5 145 chr3L 14534738 intron bbg - chr3L 14534810 intron bbg - chr3L 14534883 intron bbg - chr3L_9_14530001 chr3L_14530001 RAL-109_125b 2491 chr3L 14546568 14546811 chr3L 14546699 14546942 30 129 3.5 4.0 3.8 6.2 374 chr3L 14546568 intron CG9238 - chr3L 14546755 intron CG9238 - chr3L 14546942 intron CG9238 - chr3L_30_14545001 chr3L_14545001 RAL-109_125b 2492 chr3L 14596170 14596201 chr3L 14596316 14596347 13 146 6.5 4.5 5.5 2.0 177 chr3L 14596170 intron HGTX - chr3L 14596258 intron HGTX - chr3L 14596347 intron HGTX - chr3L_13_14595001 chr3L_14595001 RAL-109_125b 2493 chr3L 14721153 14721155 chr3L 14723040 14723048 Rt1c 4 1890 13.5 9.0 11.2 0.3 1895 chr3L 14721153 intron ome + chr3L 14722100 intron ome + chr3L 14723048 intron ome + chr3L_4_14720001 chr3L_14720001 RAL-109_125b 2494 chr3L 14721156 14721208 chr3L 14723034 14723079 Rt1c 16 1880 5.0 8.0 6.5 2.1 1923 chr3L 14721156 intron ome + chr3L 14722118 intron ome + chr3L 14723079 intron ome + chr3L_16_14720001 chr3L_14720001 RAL-109_125b 2495 chr3L 14724778 14724837 chr3L 14724912 14724971 14 133 6.5 10.0 8.2 1.5 193 chr3L 14724778 intron ome + chr3L 14724874 intron ome + chr3L 14724971 intron ome + chr3L_14_14720001 chr3L_14720001 RAL-109_125b 2496 chr3L 14725562 14725614 chr3L 14728606 14728658 Doc 16 3043 5.0 8.0 6.5 2.1 3096 chr3L 14725562 intron ome + chr3L 14727110 intron ome + chr3L 14728658 intron ome + chr3L_16_14725001 chr3L_14725001 RAL-109_125b 2497 chr3L 14809591 14809650 chr3L 14810458 14810516 16 865 6.5 11.0 8.8 1.6 925 chr3L 14809591 intron CG17839 + chr3L 14810054 intron CG17839 + chr3L 14810516 intron CG17839 + chr3L_16_14810001 chr3L_14810001 RAL-109_125b 2498 chr3L 14848670 14848694 chr3L 14848766 14848798 8 113 8.5 5.5 7.0 1.0 128 chr3L 14848670 intron CG17839 + chr3L 14848734 intron CG17839 + chr3L 14848798 intron CG17839 + chr3L_8_14845001 chr3L_14845001 RAL-109_125b 2499 chr3L 14855539 14855611 chr3L 14855677 14855714 27 134 8.5 9.0 8.8 2.8 175 chr3L 14855539 intron CG17839 + chr3L 14855626 intron CG17839 + chr3L 14855714 intron CG17839 + chr3L_27_14855001 chr3L_14855001 RAL-109_125b 2500 chr3L 14861760 14861829 chr3L 14861890 14861959 13 130 7.5 8.5 8.0 1.4 199 chr3L 14861760 intron CG17839 + chr3L 14861860 intron CG17839 + chr3L 14861959 intron CG17839 + chr3L_13_14860001 chr3L_14860001 RAL-109_125b 2501 chr3L 14866778 14866827 chr3L 14866919 14866968 13 138 5.5 11.0 8.2 1.4 190 chr3L 14866778 exon CG17839 + chr3L 14866873 intron CG17839 + chr3L 14866968 intron CG17839 + chr3L_13_14865001 chr3L_14865001 RAL-109_125b 2502 chr3L 14922065 14922134 chr3L 14922213 14922292 16 149 8.5 0.5 4.5 2.9 227 chr3L 14922065 intron DCX-EMAP + chr3L 14922178 intron DCX-EMAP + chr3L 14922292 intron DCX-EMAP + chr3L_16_14920001 chr3L_14920001 RAL-109_125b 2503 chr3L 14959901 14959970 chr3L 14960032 14960100 14 131 8.0 7.0 7.5 1.6 199 chr3L 14959901 intergenic not near genes chr3L 14960000 intergenic not near genes chr3L 14960100 intergenic not near genes chr3L_14_14960001 chr3L_14960001 RAL-109_125b 2504 chr3L 14970751 14970761 chr3L 14971083 14971113 F-element 7 356 0.0 4.0 2.0 2.3 362 chr3L 14970751 intergenic Tom + chr3L 14970932 intergenic not near genes chr3L 14971113 intergenic not near genes chr3L_7_14970001 chr3L_14970001 RAL-109_125b 2505 chr3L 15005971 15005998 chr3L 15006177 15006181 5 201 20.0 11.0 15.5 0.3 210 chr3L 15005971 intron Reck - chr3L 15006076 intron Reck - chr3L 15006181 intron Reck - chr3L_5_15005001 chr3L_15005001 RAL-109_125b 2506 chr3L 15006000 15006047 chr3L 15006171 15006254 12 186 8.0 9.0 8.5 1.3 254 chr3L 15006000 intron Reck - chr3L 15006127 intron Reck - chr3L 15006254 intron Reck - chr3L_12_15005001 chr3L_15005001 RAL-109_125b 2507 chr3L 15024024 15024055 chr3L 15024150 15024179 6 128 0.0 7.5 3.8 1.2 155 chr3L 15024024 intron Sytbeta - chr3L 15024102 intron Sytbeta - chr3L 15024179 intron Sytbeta - chr3L_6_15020001 chr3L_15020001 RAL-109_125b 2508 chr3L 15085003 15085077 chr3L 15086219 15086293 1360 28 1215 6.5 5.5 6.0 4.0 1290 chr3L 15085003 intron cp309 - chr3L 15085648 intron cp309 - chr3L 15086293 intron cp309 - chr3L_28_15085001 chr3L_15085001 RAL-109_125b 2509 chr3L 15094926 15094963 chr3L 15095072 15095109 11 145 3.0 8.5 5.8 1.6 183 chr3L 15094926 intergenic cp309 -,CG6945 -,Aats-gly + chr3L 15095018 intergenic Aats-gly +,cp309 -,CG6945 - chr3L 15095109 intergenic Aats-gly +,cp309 -,CG6945 - chr3L_11_15095001 chr3L_15095001 RAL-109_125b 2510 chr3L 15104098 15104140 chr3L 15104246 15104279 12 143 4.0 4.0 4.0 2.4 181 chr3L 15104098 intron CTPsyn + chr3L 15104188 intron CTPsyn + chr3L 15104279 intron CTPsyn + chr3L_12_15100001 chr3L_15100001 RAL-109_125b 2511 chr3L 15146115 15146171 chr3L 15146242 15146310 12 129 0.0 9.0 4.5 2.2 195 chr3L 15146115 3` UTR Pex3 + chr3L 15146212 3` UTR Pex3 + chr3L 15146310 3` UTR Pex3 + chr3L_12_15145001 chr3L_15145001 RAL-109_125b 2512 chr3L 15163616 15163648 chr3L 15163734 15163747 4 106 16.5 0.0 8.2 0.4 131 chr3L 15163616 5` UTR CG7011 - chr3L 15163682 intergenic CG7011 - chr3L 15163747 intergenic CG7011 - chr3L_4_15160001 chr3L_15160001 RAL-109_125b 2513 chr3L 15164978 15165043 chr3L 15165126 15165192 8 148 0.0 4.0 2.0 2.7 214 chr3L 15164978 intergenic not near genes chr3L 15165085 intergenic not near genes chr3L 15165192 intergenic not near genes chr3L_8_15165001 chr3L_15165001 RAL-109_125b 2514 chr3L 15174571 15174574 chr3L 15174724 15174727 4 153 9.5 10.0 9.8 0.4 156 chr3L 15174571 intergenic not near genes chr3L 15174649 intergenic not near genes chr3L 15174727 intergenic not near genes chr3L_4_15170001 chr3L_15170001 RAL-109_125b 2515 chr3L 15174580 15174614 chr3L 15174723 15174767 7 149 4.5 10.0 7.2 0.9 187 chr3L 15174580 intergenic not near genes chr3L 15174674 intergenic not near genes chr3L 15174767 intergenic not near genes chr3L_7_15170001 chr3L_15170001 RAL-109_125b 2516 chr3L 15219697 15219774 chr3L 15219829 15219906 19 131 3.5 7.5 5.5 2.9 209 chr3L 15219697 intergenic not near genes chr3L 15219802 intergenic not near genes chr3L 15219906 intergenic not near genes chr3L_19_15215001 chr3L_15215001 RAL-109_125b 2517 chr3L 15232462 15232521 chr3L 15232593 15232652 14 131 8.0 7.5 7.8 1.6 190 chr3L 15232462 intergenic not near genes chr3L 15232557 intergenic not near genes chr3L 15232652 intergenic not near genes chr3L_14_15230001 chr3L_15230001 RAL-109_125b 2518 chr3L 15257385 15257439 chr3L 15257648 15257682 15 260 3.0 1.5 2.2 4.7 297 chr3L 15257385 intergenic not near genes chr3L 15257534 intergenic not near genes chr3L 15257682 intergenic not near genes chr3L_15_15255001 chr3L_15255001 RAL-109_125b 2519 chr3L 15295728 15295734 chr3L 15298621 15298627 gypsy5 7 2893 11.5 6.5 9.0 0.7 2899 chr3L 15295728 intergenic not near genes chr3L 15297178 intergenic not near genes chr3L 15298627 intergenic Best4 + chr3L_7_15295001 chr3L_15295001 RAL-109_125b 2520 chr3L 15295736 15295793 chr3L 15298614 15298686 gypsy5 16 2891 6.5 5.0 5.8 2.4 2950 chr3L 15295736 intergenic not near genes chr3L 15297211 intergenic not near genes chr3L 15298686 intergenic Best4 + chr3L_16_15295001 chr3L_15295001 RAL-109_125b 2521 chr3L 15327175 15327228 chr3L 15327301 15327353 14 121 9.5 8.0 8.8 1.4 178 chr3L 15327175 intergenic not near genes chr3L 15327264 intergenic not near genes chr3L 15327353 intergenic not near genes chr3L_14_15325001 chr3L_15325001 RAL-109_125b 2522 chr3L 15333114 15333163 chr3L 15333244 15333293 8 127 7.0 12.0 9.5 0.8 179 chr3L 15333114 intergenic CR43247 + chr3L 15333204 intergenic CR43247 + chr3L 15333293 intergenic CR43247 + chr3L_8_15330001 chr3L_15330001 RAL-109_125b 2523 chr3L 15348064 15348135 chr3L 15348272 15348343 15 206 6.5 5.5 6.0 2.1 279 chr3L 15348064 intergenic not near genes chr3L 15348204 intergenic not near genes chr3L 15348343 intergenic not near genes chr3L_15_15345001 chr3L_15345001 RAL-109_125b 2524 chr3L 15384926 15384980 chr3L 15385104 15385158 19 170 8.0 2.5 5.2 3.1 232 chr3L 15384926 intergenic not near genes chr3L 15385042 intergenic not near genes chr3L 15385158 intergenic not near genes chr3L_19_15385001 chr3L_15385001 RAL-109_125b 2525 chr3L 15405980 15406047 chr3L 15406107 15406137 15 127 4.0 7.5 5.8 2.2 157 chr3L 15405980 intergenic not near genes chr3L 15406058 intergenic not near genes chr3L 15406137 intergenic not near genes chr3L_15_15405001 chr3L_15405001 RAL-109_125b 2526 chr3L 15423720 15423781 chr3L 15426614 15426675 opus 16 2894 5.5 5.5 5.5 2.5 2955 chr3L 15423720 intergenic not near genes chr3L 15425198 intergenic not near genes chr3L 15426675 intergenic not near genes chr3L_16_15425001 chr3L_15425001 RAL-109_125b 2527 chr3L 15465987 15466132 chr3L 15466119 15466278 16 152 0.0 0.0 0.0 16.0 291 chr3L 15465987 intergenic not near genes chr3L 15466132 intergenic not near genes chr3L 15466278 intergenic not near genes chr3L_16_15465001 chr3L_15465001 RAL-109_125b 2528 chr3L 15466484 15466546 chr3L 15466618 15466665 10 129 4.0 5.0 4.5 1.8 181 chr3L 15466484 intergenic not near genes chr3L 15466574 intergenic not near genes chr3L 15466665 intergenic not near genes chr3L_10_15465001 chr3L_15465001 RAL-109_125b 2529 chr3L 15472610 15472640 chr3L 15472737 15472742 15 124 17.5 13.0 15.2 0.9 132 chr3L 15472610 3` UTR CG7804 - chr3L 15472676 exon CG7804 - chr3L 15472742 exon CG7804 - chr3L_15_15470001 chr3L_15470001 RAL-109_125b 2530 chr3L 15493265 15493339 chr3L 15493410 15493484 6 145 5.5 0.0 2.8 1.6 219 chr3L 15493265 exon CG12355 - chr3L 15493374 intron CG12355 - chr3L 15493484 5` UTR CG12355 - chr3L_6_15490001 chr3L_15490001 RAL-109_125b 2531 chr3L 15516106 15516135 chr3L 15516405 15516434 10 299 1.5 0.0 0.8 5.6 328 chr3L 15516106 intergenic CG13454 - chr3L 15516270 intergenic CG13454 - chr3L 15516434 intergenic CG13454 - chr3L_10_15515001 chr3L_15515001 RAL-109_125b 2532 chr3L 15533125 15533155 chr3L 15533256 15533287 10 132 0.0 11.5 5.8 1.5 162 chr3L 15533125 intergenic not near genes chr3L 15533206 intergenic not near genes chr3L 15533287 intergenic not near genes chr3L_10_15530001 chr3L_15530001 RAL-109_125b 2533 chr3L 15540900 15540921 chr3L 15541040 15541043 5 135 13.5 12.0 12.8 0.4 143 chr3L 15540900 intron CrebA + chr3L 15540972 intron CrebA + chr3L 15541043 intron CrebA + chr3L_5_15540001 chr3L_15540001 RAL-109_125b 2534 chr3L 15541575 15541646 chr3L 15541716 15541787 25 140 10.5 0.5 5.5 3.8 212 chr3L 15541575 intron CrebA + chr3L 15541681 intron CrebA + chr3L 15541787 intron CrebA + chr3L_25_15540001 chr3L_15540001 RAL-109_125b 2535 chr3L 15554879 15554943 chr3L 15556716 15556756 S-element 18 1834 7.0 8.5 7.8 2.0 1877 chr3L 15554879 intron AGO2 + chr3L 15555818 intron AGO2 + chr3L 15556756 intron AGO2 + chr3L_18_15555001 chr3L_15555001 RAL-109_125b 2536 chr3L 15596622 15596699 chr3L 15596749 15596826 28 126 13.0 6.5 9.8 2.6 204 chr3L 15596622 intron RhoGAP71E + chr3L 15596724 intron RhoGAP71E + chr3L 15596826 intron RhoGAP71E + chr3L_28_15595001 chr3L_15595001 RAL-109_125b 2537 chr3L 15600149 15600195 chr3L 15600300 15600346 15 151 7.0 6.5 6.8 1.9 197 chr3L 15600149 intron RhoGAP71E + chr3L 15600248 intron RhoGAP71E + chr3L 15600346 intron RhoGAP71E + chr3L_15_15600001 chr3L_15600001 RAL-109_125b 2538 chr3L 15604538 15604581 chr3L 15604664 15604707 15 125 11.0 5.0 8.0 1.7 169 chr3L 15604538 intron RhoGAP71E + chr3L 15604622 intron RhoGAP71E + chr3L 15604707 intron RhoGAP71E + chr3L_15_15600001 chr3L_15600001 RAL-109_125b 2539 chr3L 15633052 15633201 chr3L 15633156 15633325 18 128 0.5 2.0 1.2 8.2 273 chr3L 15633052 intron comm3 - chr3L 15633188 intron comm3 - chr3L 15633325 intron comm3 - chr3L_18_15630001 chr3L_15630001 RAL-109_125b 2540 chr3L 15637977 15638045 chr3L 15638164 15638232 19 187 6.5 6.0 6.2 2.6 255 chr3L 15637977 intron comm3 - chr3L 15638104 intron comm3 - chr3L 15638232 intron comm3 - chr3L_19_15635001 chr3L_15635001 RAL-109_125b 2541 chr3L 15658620 15658663 chr3L 15658841 15658884 22 220 8.5 5.5 7.0 2.8 264 chr3L 15658620 intergenic Eig71Eh -,Eig71Eg + chr3L 15658752 intergenic Eig71Eh - chr3L 15658884 intergenic Eig71Eh - chr3L_22_15655001 chr3L_15655001 RAL-109_125b 2542 chr3L 15756841 15756911 chr3L 15756974 15757043 15 121 6.0 0.0 3.0 3.8 202 chr3L 15756841 intergenic not near genes chr3L 15756942 intergenic not near genes chr3L 15757043 intergenic not near genes chr3L_15_15755001 chr3L_15755001 RAL-109_125b 2543 chr3L 15760652 15760695 chr3L 15760772 15760828 8 131 6.5 0.5 3.5 1.8 176 chr3L 15760652 intergenic not near genes chr3L 15760740 intergenic not near genes chr3L 15760828 intergenic not near genes chr3L_8_15760001 chr3L_15760001 RAL-109_125b 2544 chr3L 15765623 15765637 chr3L 15765726 15765743 5 106 10.5 5.0 7.8 0.6 120 chr3L 15765623 intergenic not near genes chr3L 15765683 intergenic not near genes chr3L 15765743 intergenic not near genes chr3L_5_15765001 chr3L_15765001 RAL-109_125b 2545 chr3L 15765639 15765676 chr3L 15765723 15765788 16 115 8.0 4.0 6.0 2.3 149 chr3L 15765639 intergenic not near genes chr3L 15765714 intergenic not near genes chr3L 15765788 intergenic not near genes chr3L_16_15765001 chr3L_15765001 RAL-109_125b 2546 chr3L 15769094 15769119 chr3L 15769235 15769260 7 141 0.0 8.5 4.2 1.3 166 chr3L 15769094 intergenic not near genes chr3L 15769177 intergenic not near genes chr3L 15769260 intergenic not near genes chr3L_7_15765001 chr3L_15765001 RAL-109_125b 2547 chr3L 15832212 15832276 chr3L 15832343 15832400 16 130 8.0 9.0 8.5 1.7 188 chr3L 15832212 intergenic dbo +,CG12713 + chr3L 15832306 intergenic CG12713 +,dbo + chr3L 15832400 intergenic CG12713 +,dbo + chr3L_16_15830001 chr3L_15830001 RAL-109_125b 2548 chr3L 15840412 15840468 chr3L 15840550 15840603 13 130 4.5 7.0 5.8 1.9 191 chr3L 15840412 intron CG32150 - chr3L 15840508 intron CG32150 - chr3L 15840603 intron CG32150 - chr3L_13_15840001 chr3L_15840001 RAL-109_125b 2549 chr3L 15843013 15843048 chr3L 15843206 15843240 7 192 0.0 10.0 5.0 1.2 227 chr3L 15843013 intron CG32150 - chr3L 15843126 intron CG32150 - chr3L 15843240 intron CG32150 - chr3L_7_15840001 chr3L_15840001 RAL-109_125b 2550 chr3L 15875594 15875667 chr3L 15875806 15875878 31 207 5.0 6.0 5.5 4.8 284 chr3L 15875594 intron pHCl - chr3L 15875736 intron pHCl - chr3L 15875878 intron pHCl - chr3L_31_15875001 chr3L_15875001 RAL-109_125b 2551 chr3L 15883144 15883222 chr3L 15883487 15883540 24 339 4.5 4.5 4.5 4.4 396 chr3L 15883144 intron pHCl - chr3L 15883342 intron pHCl - chr3L 15883540 intron pHCl - chr3L_24_15880001 chr3L_15880001 RAL-109_125b 2552 chr3L 15899196 15899213 chr3L 15899803 15899820 jockey 4 611 13.0 11.0 12.0 0.3 624 chr3L 15899196 intergenic pHCl - chr3L 15899508 intergenic pHCl - chr3L 15899820 intergenic sff - chr3L_4_15895001 chr3L_15895001 RAL-109_125b 2553 chr3L 15899215 15899251 chr3L 15899795 15899832 jockey 10 602 4.5 9.5 7.0 1.2 617 chr3L 15899215 intergenic pHCl - chr3L 15899524 intergenic pHCl - chr3L 15899832 intergenic sff - chr3L_10_15895001 chr3L_15895001 RAL-109_125b 2554 chr3L 15929158 15929169 chr3L 15938351 15938362 roo 9 9193 7.5 5.5 6.5 1.2 9204 chr3L 15929158 intron Pka-C3 - chr3L 15933760 intron Pka-C3 - chr3L 15938362 intron Pka-C3 - chr3L_9_15930001 chr3L_15930001 RAL-109_125b 2555 chr3L 15946462 15946518 chr3L 15946598 15946654 21 135 8.0 9.5 8.8 2.1 192 chr3L 15946462 intron Pka-C3 - chr3L 15946558 intron Pka-C3 - chr3L 15946654 intron Pka-C3 - chr3L_21_15945001 chr3L_15945001 RAL-109_125b 2556 chr3L 15981634 15981685 chr3L 15981770 15981822 19 136 11.0 9.5 10.2 1.7 188 chr3L 15981634 intron,3` UTR brm -,CG17027 + chr3L 15981728 intron,3` UTR brm -,CG17027 + chr3L 15981822 intron,3` UTR brm -,CG17027 + chr3L_19_15980001 chr3L_15980001 RAL-109_125b 2557 chr3L 15989202 15989227 chr3L 15989323 15989349 13 129 6.5 7.5 7.0 1.6 147 chr3L 15989202 intron Hip14 + chr3L 15989276 intron Hip14 + chr3L 15989349 intron Hip14 + chr3L_13_15985001 chr3L_15985001 RAL-109_125b 2558 chr3L 16032115 16032154 chr3L 16032255 16032294 5 140 5.0 11.5 8.2 0.5 179 chr3L 16032115 3` UTR Notum + chr3L 16032204 3` UTR Notum + chr3L 16032294 3` UTR Notum + chr3L_5_16030001 chr3L_16030001 RAL-109_125b 2559 chr3L 16043982 16044052 chr3L 16044361 16044431 24 375 3.5 8.0 5.8 3.5 449 chr3L 16043982 intron th - chr3L 16044206 intron th - chr3L 16044431 intron th - chr3L_24_16040001 chr3L_16040001 RAL-109_125b 2560 chr3L 16149156 16149226 chr3L 16149295 16149365 31 137 7.0 9.0 8.0 3.4 209 chr3L 16149156 intron CG5151 - chr3L 16149260 intron CG5151 - chr3L 16149365 intron CG5151 - chr3L_31_16145001 chr3L_16145001 RAL-109_125b 2561 chr3L 16158761 16158829 chr3L 16158896 16158964 27 133 9.0 9.5 9.2 2.6 203 chr3L 16158761 intron CG5151 - chr3L 16158862 intron CG5151 - chr3L 16158964 intron CG5151 - chr3L_27_16155001 chr3L_16155001 RAL-109_125b 2562 chr3L 16184065 16184126 chr3L 16188934 16188985 X-element 16 4866 5.0 10.0 7.5 1.9 4920 chr3L 16184065 intergenic not near genes chr3L 16186525 intergenic not near genes chr3L 16188985 intergenic not near genes chr3L_16_16185001 chr3L_16185001 RAL-109_125b 2563 chr3L 16198344 16198413 chr3L 16198479 16198548 21 131 12.0 8.5 10.2 1.9 204 chr3L 16198344 exon CG33687 + chr3L 16198446 exon CG33687 + chr3L 16198548 exon CG33687 + chr3L_21_16195001 chr3L_16195001 RAL-109_125b 2564 chr3L 16205571 16205588 chr3L 16205721 16205732 8 148 12.0 0.0 6.0 1.1 161 chr3L 16205571 intergenic not near genes chr3L 16205652 intergenic not near genes chr3L 16205732 intergenic not near genes chr3L_8_16205001 chr3L_16205001 RAL-109_125b 2565 chr3L 16212769 16212806 chr3L 16212910 16212947 16 141 13.5 0.0 6.8 2.1 178 chr3L 16212769 intergenic CG13073 - chr3L 16212858 intergenic CG13073 - chr3L 16212947 intergenic CG13073 - chr3L_16_16210001 chr3L_16210001 RAL-109_125b 2566 chr3L 16236306 16236370 chr3L 16236460 16236535 17 161 6.0 9.5 7.8 1.9 229 chr3L 16236306 3` UTR l(3)72Dp + chr3L 16236420 3` UTR l(3)72Dp + chr3L 16236535 3` UTR l(3)72Dp + chr3L_17_16235001 chr3L_16235001 RAL-109_125b 2567 chr3L 16240706 16240779 chr3L 16240888 16240960 18 176 0.0 6.5 3.2 4.3 254 chr3L 16240706 intergenic not near genes chr3L 16240833 intergenic not near genes chr3L 16240960 intergenic not near genes chr3L_18_16240001 chr3L_16240001 RAL-109_125b 2568 chr3L 16260386 16260459 chr3L 16260520 16260592 5 134 0.0 3.0 1.5 2.0 206 chr3L 16260386 intergenic not near genes chr3L 16260489 intergenic not near genes chr3L 16260592 intergenic not near genes chr3L_5_16260001 chr3L_16260001 RAL-109_125b 2569 chr3L 16286395 16286463 chr3L 16286805 16286873 24 408 10.5 9.0 9.8 2.2 478 chr3L 16286395 intergenic not near genes chr3L 16286634 intergenic not near genes chr3L 16286873 intergenic not near genes chr3L_24_16285001 chr3L_16285001 RAL-109_125b 2570 chr3L 16366729 16366798 chr3L 16366914 16366962 27 183 6.0 8.0 7.0 3.4 233 chr3L 16366729 exon Cpr72Ec - chr3L 16366846 exon Cpr72Ec - chr3L 16366962 exon Cpr72Ec - chr3L_27_16365001 chr3L_16365001 RAL-109_125b 2571 chr3L 16431786 16431856 chr3L 16431930 16432001 21 144 6.0 5.0 5.5 3.2 215 chr3L 16431786 intron,intron CG33158 +,dsx-c73A - chr3L 16431894 intron,intron CG33158 +,dsx-c73A - chr3L 16432001 intron,intron CG33158 +,dsx-c73A - chr3L_21_16430001 chr3L_16430001 RAL-109_125b 2572 chr3L 16443779 16443878 chr3L 16446189 16446268 Doc 15 2399 0.0 4.5 2.2 4.7 2489 chr3L 16443779 intron,intron CG33158 +,dsx-c73A - chr3L 16445024 intron,intron CG33158 +,dsx-c73A - chr3L 16446268 intron,intron CG33158 +,dsx-c73A - chr3L_15_16445001 chr3L_16445001 RAL-109_125b 2573 chr3L 16493937 16493996 chr3L 16494504 16494563 jockey 30 566 9.0 14.5 11.8 2.3 626 chr3L 16493937 intron,exon,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494250 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494563 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_30_16490001 chr3L_16490001 RAL-109_125b 2574 chr3L 16514497 16514560 chr3L 16514668 16514731 16 167 7.5 8.0 7.8 1.8 234 chr3L 16514497 intron CG43373 - chr3L 16514614 intron CG43373 - chr3L 16514731 intron CG43373 - chr3L_16_16510001 chr3L_16510001 RAL-109_125b 2575 chr3L 16521764 16521839 chr3L 16521906 16521982 27 141 6.0 10.0 8.0 3.0 218 chr3L 16521764 intron CG43373 - chr3L 16521873 intron CG43373 - chr3L 16521982 intron CG43373 - chr3L_27_16520001 chr3L_16520001 RAL-109_125b 2576 chr3L 16533515 16533587 chr3L 16533676 16533744 19 159 0.0 3.0 1.5 7.6 229 chr3L 16533515 intron CG43373 - chr3L 16533630 intron CG43373 - chr3L 16533744 intron CG43373 - chr3L_19_16530001 chr3L_16530001 RAL-109_125b 2577 chr3L 16540012 16540079 chr3L 16540150 16540198 27 135 6.5 11.5 9.0 2.7 186 chr3L 16540012 intron CG43373 - chr3L 16540105 intron CG43373 - chr3L 16540198 intron CG43373 - chr3L_27_16540001 chr3L_16540001 RAL-109_125b 2578 chr3L 16563181 16563206 chr3L 16563312 16563337 8 131 13.0 0.5 6.8 1.0 156 chr3L 16563181 intergenic Mipp1 - chr3L 16563259 intergenic Mipp1 - chr3L 16563337 intergenic Mipp1 - chr3L_8_16560001 chr3L_16560001 RAL-109_125b 2579 chr3L 16610640 16610710 chr3L 16610775 16610845 34 133 4.0 8.0 6.0 4.9 205 chr3L 16610640 intergenic Su(P) -,Prosbeta6 - chr3L 16610742 exon Su(P) - chr3L 16610845 intron Su(P) - chr3L_34_16610001 chr3L_16610001 RAL-109_125b 2580 chr3L 16616465 16616537 chr3L 16621843 16621911 297 23 5375 9.0 5.5 7.2 2.8 5446 chr3L 16616465 3` UTR Abl - chr3L 16619188 3` UTR Abl - chr3L 16621911 3` UTR Abl - chr3L_23_16615001 chr3L_16615001 RAL-109_125b 2581 chr3L 16632182 16632244 chr3L 16632418 16632470 23 225 10.0 2.0 6.0 3.3 288 chr3L 16632182 intron Abl - chr3L 16632326 intron Abl - chr3L 16632470 intron Abl - chr3L_23_16630001 chr3L_16630001 RAL-109_125b 2582 chr3L 16681815 16681880 chr3L 16681956 16682021 19 138 7.0 9.5 8.2 2.1 206 chr3L 16681815 intron,intron Lasp -,CG43954 - chr3L 16681918 intron,intron Lasp -,CG43954 - chr3L 16682021 intron,intron Lasp -,CG43954 - chr3L_19_16680001 chr3L_16680001 RAL-109_125b 2583 chr3L 16683993 16684036 chr3L 16689257 16689307 copia 13 5270 3.5 6.0 4.8 2.2 5314 chr3L 16683993 intron,intron Lasp -,CG43954 - chr3L 16686650 intron,intron Lasp -,CG43954 - chr3L 16689307 intron,intron,5` UTR Lasp -,CG43954 -,CR45179 + chr3L_13_16685001 chr3L_16685001 RAL-109_125b 2584 chr3L 16690138 16690164 chr3L 16690266 16690292 10 122 19.5 17.0 18.2 0.5 154 chr3L 16690138 intron,intron,intron Lasp -,CG43954 -,CR45179 + chr3L 16690215 intron,intron,intron Lasp -,CG43954 -,CR45179 + chr3L 16690292 intron,intron,intron Lasp -,CG43954 -,CR45179 + chr3L_10_16690001 chr3L_16690001 RAL-109_125b 2585 chr3L 16709426 16709501 chr3L 16709566 16709620 28 136 12.5 6.5 9.5 2.7 194 chr3L 16709426 intron,intron Lasp -,CG43954 - chr3L 16709523 intron,intron Lasp -,CG43954 - chr3L 16709620 intron,intron Lasp -,CG43954 - chr3L_28_16705001 chr3L_16705001 RAL-109_125b 2586 chr3L 16749166 16749178 chr3L 16749292 16749304 4 125 17.5 4.0 10.8 0.3 138 chr3L 16749166 intergenic not near genes chr3L 16749235 intergenic not near genes chr3L 16749304 intergenic not near genes chr3L_4_16745001 chr3L_16745001 RAL-109_125b 2587 chr3L 16749180 16749186 chr3L 16749280 16749312 4 114 15.5 4.5 10.0 0.4 132 chr3L 16749180 intergenic not near genes chr3L 16749246 intergenic not near genes chr3L 16749312 intergenic not near genes chr3L_4_16745001 chr3L_16745001 RAL-109_125b 2588 chr3L 16749189 16749209 chr3L 16749279 16749331 4 116 11.0 4.5 7.8 0.5 142 chr3L 16749189 intergenic not near genes chr3L 16749260 intergenic not near genes chr3L 16749331 intergenic not near genes chr3L_4_16745001 chr3L_16745001 RAL-109_125b 2589 chr3L 16807997 16808070 chr3L 16808123 16808174 15 125 9.0 4.5 6.8 1.9 177 chr3L 16807997 intron nudC + chr3L 16808086 intron nudC + chr3L 16808174 intron nudC + chr3L_15_16805001 chr3L_16805001 RAL-109_125b 2590 chr3L 16817834 16817903 chr3L 16818017 16818048 32 183 5.5 6.5 6.0 4.6 214 chr3L 16817834 intron,intron nudC +,CG13024 - chr3L 16817941 intron,intron nudC +,CG13024 - chr3L 16818048 intron,intron nudC +,CG13024 - chr3L_32_16815001 chr3L_16815001 RAL-109_125b 2591 chr3L 16830732 16830756 chr3L 16830865 16830889 9 133 15.5 7.0 11.2 0.7 157 chr3L 16830732 intergenic not near genes chr3L 16830810 intergenic not near genes chr3L 16830889 intergenic not near genes chr3L_9_16830001 chr3L_16830001 RAL-109_125b 2592 chr3L 16830757 16830792 chr3L 16830860 16830925 15 126 7.5 6.0 6.8 1.9 168 chr3L 16830757 intergenic not near genes chr3L 16830841 intergenic not near genes chr3L 16830925 intergenic not near genes chr3L_15_16830001 chr3L_16830001 RAL-109_125b 2593 chr3L 16844975 16845041 chr3L 16845138 16845204 26 162 8.0 7.0 7.5 3.1 229 chr3L 16844975 5` UTR CG9669 - chr3L 16845090 intergenic CG9669 -,CG9715 + chr3L 16845204 intergenic CG9715 +,CG9669 - chr3L_26_16845001 chr3L_16845001 RAL-109_125b 2594 chr3L 16882278 16882307 chr3L 16882404 16882430 9 129 3.5 8.0 5.8 1.3 152 chr3L 16882278 intron Lmpt + chr3L 16882354 intron Lmpt + chr3L 16882430 intron Lmpt + chr3L_9_16880001 chr3L_16880001 RAL-109_125b 2595 chr3L 16945696 16945722 chr3L 16954888 16954893 roo 9 9191 15.0 5.5 10.2 0.8 9197 chr3L 16945696 exon Obp73a + chr3L 16950294 intergenic not near genes chr3L 16954893 5` UTR Nc73EF + chr3L_9_16950001 chr3L_16950001 RAL-109_125b 2596 chr3L 16945731 16945759 chr3L 16954887 16954956 roo 8 9185 7.5 5.5 6.5 1.1 9225 chr3L 16945731 exon Obp73a + chr3L 16950344 intergenic not near genes chr3L 16954956 5` UTR Nc73EF + chr3L_8_16950001 chr3L_16950001 RAL-109_125b 2597 chr3L 16972029 16972060 chr3L 16972145 16972156 7 119 6.5 3.0 4.8 1.2 127 chr3L 16972029 intron Exn + chr3L 16972092 intron Exn + chr3L 16972156 intron Exn + chr3L_7_16970001 chr3L_16970001 RAL-109_125b 2598 chr3L 16973335 16973342 chr3L 23583082 23583095 4 6609752 10.5 19.5 15.0 0.2 6609760 chr3L 16973335 intron Exn + chr3L 20278215 exon gogo - chr3L 23583095 intron AGO3 + chr3L_4_20275001 chr3L_20275001 RAL-109_125b 2599 chr3L 17024014 17024082 chr3L 17024145 17024213 23 130 11.5 13.5 12.5 1.7 199 chr3L 17024014 intergenic a10 -,Fit2 + chr3L 17024114 intergenic Fit2 +,a10 - chr3L 17024213 intergenic Fit2 +,a10 - chr3L_23_17020001 chr3L_17020001 RAL-109_125b 2600 chr3L 17034886 17034939 chr3L 17035120 17035177 G2 12 238 4.0 6.0 5.0 2.0 291 chr3L 17034886 intergenic not near genes chr3L 17035032 intergenic not near genes chr3L 17035177 intergenic beg + chr3L_12_17035001 chr3L_17035001 RAL-109_125b 2601 chr3L 17084960 17085029 chr3L 17094159 17094228 roo 29 9199 5.5 8.0 6.8 3.7 9268 chr3L 17084960 intron Rbp6 - chr3L 17089594 intron Rbp6 - chr3L 17094228 intron Rbp6 - chr3L_29_17085001 chr3L_17085001 RAL-109_125b 2602 chr3L 17110264 17110336 chr3L 17110395 17110467 16 118 12.0 10.5 11.2 1.3 203 chr3L 17110264 intron Rbp6 - chr3L 17110366 intron Rbp6 - chr3L 17110467 intron Rbp6 - chr3L_16_17110001 chr3L_17110001 RAL-109_125b 2603 chr3L 17280050 17280119 chr3L 17280183 17280235 19 129 4.0 7.0 5.5 2.9 185 chr3L 17280050 intergenic not near genes chr3L 17280142 intergenic not near genes chr3L 17280235 intergenic not near genes chr3L_19_17280001 chr3L_17280001 RAL-109_125b 2604 chr3L 17320845 17320899 chr3L 17320982 17321036 20 136 8.5 8.0 8.2 2.2 191 chr3L 17320845 intergenic CG6485 - chr3L 17320940 intergenic CG6485 - chr3L 17321036 intergenic CG6485 - chr3L_20_17320001 chr3L_17320001 RAL-109_125b 2605 chr3L 17331022 17331093 chr3L 17331162 17331233 19 139 8.0 4.5 6.2 2.6 211 chr3L 17331022 intergenic not near genes chr3L 17331128 intergenic not near genes chr3L 17331233 intergenic not near genes chr3L_19_17330001 chr3L_17330001 RAL-109_125b 2606 chr3L 17367351 17367424 chr3L 17367538 17367601 29 186 6.5 8.0 7.2 3.5 250 chr3L 17367351 5` UTR CR45688 + chr3L 17367476 intergenic CR45688 +,Cad74A - chr3L 17367601 intergenic Cad74A -,CR45688 + chr3L_29_17365001 chr3L_17365001 RAL-109_125b 2607 chr3L 17408874 17408922 chr3L 17409000 17409048 17 125 10.0 6.5 8.2 1.8 174 chr3L 17408874 intron blot - chr3L 17408961 intron blot - chr3L 17409048 intron blot - chr3L_17_17405001 chr3L_17405001 RAL-109_125b 2608 chr3L 17497657 17497724 chr3L 17497828 17497895 9 169 5.5 6.5 6.0 1.3 238 chr3L 17497657 intron Oatp74D + chr3L 17497776 intron Oatp74D + chr3L 17497895 intron Oatp74D + chr3L_9_17495001 chr3L_17495001 RAL-109_125b 2609 chr3L 17500675 17500691 chr3L 17500805 17500808 7 132 16.0 11.5 13.8 0.5 133 chr3L 17500675 intron Oatp74D + chr3L 17500742 intron Oatp74D + chr3L 17500808 intron Oatp74D + chr3L_7_17500001 chr3L_17500001 RAL-109_125b 2610 chr3L 17500696 17500708 chr3L 17500804 17500819 4 112 12.5 11.5 12.0 0.3 123 chr3L 17500696 intron Oatp74D + chr3L 17500758 intron Oatp74D + chr3L 17500819 intron Oatp74D + chr3L_4_17500001 chr3L_17500001 RAL-109_125b 2611 chr3L 17516935 17516945 chr3L 17524543 17524553 412 8 7608 22.0 9.5 15.8 0.5 7618 chr3L 17516935 intron CG7564 + chr3L 17520744 intron CG7564 + chr3L 17524553 3` UTR CG7564 + chr3L_8_17520001 chr3L_17520001 RAL-109_125b 2612 chr3L 17516948 17516999 chr3L 17524540 17524607 412 21 7605 10.0 9.0 9.5 2.0 7659 chr3L 17516948 intron CG7564 + chr3L 17520778 intron CG7564 + chr3L 17524607 3` UTR CG7564 + chr3L_21_17520001 chr3L_17520001 RAL-109_125b 2613 chr3L 17538287 17538365 chr3L 17538418 17538490 19 124 6.5 5.5 6.0 2.7 203 chr3L 17538287 intron Nedd4 + chr3L 17538388 intron Nedd4 + chr3L 17538490 intron Nedd4 + chr3L_19_17535001 chr3L_17535001 RAL-109_125b 2614 chr3L 17592759 17592815 chr3L 17592900 17592946 18 139 5.5 14.5 10.0 1.6 187 chr3L 17592759 intron Eip74EF - chr3L 17592852 intron Eip74EF - chr3L 17592946 intron Eip74EF - chr3L_18_17590001 chr3L_17590001 RAL-109_125b 2615 chr3L 17642128 17642141 chr3L 17642252 17642271 5 128 17.0 12.5 14.8 0.3 143 chr3L 17642128 intron Pep - chr3L 17642200 intron Pep - chr3L 17642271 intron Pep - chr3L_5_17640001 chr3L_17640001 RAL-109_125b 2616 chr3L 17659678 17659716 chr3L 17659805 17659843 12 127 13.5 10.5 12.0 0.9 165 chr3L 17659678 intergenic Crtc - chr3L 17659760 intergenic Crtc - chr3L 17659843 3` UTR Crtc - chr3L_12_17655001 chr3L_17655001 RAL-109_125b 2617 chr3L 17659717 17659757 chr3L 17659804 17659838 11 114 8.0 10.5 9.2 1.1 121 chr3L 17659717 intergenic Crtc - chr3L 17659778 intergenic Crtc - chr3L 17659838 3` UTR Crtc - chr3L_11_17655001 chr3L_17655001 RAL-109_125b 2618 chr3L 17691992 17691994 chr3L 17692112 17692121 4 128 2.0 20.0 11.0 0.3 129 chr3L 17691992 intron Ccn + chr3L 17692056 intron Ccn + chr3L 17692121 intron Ccn + chr3L_4_17690001 chr3L_17690001 RAL-109_125b 2619 chr3L 17730817 17730826 chr3L 17738196 17738206 mdg1 4 7380 16.5 9.0 12.8 0.3 7389 chr3L 17730817 intron Ccn + chr3L 17734512 intron Ccn + chr3L 17738206 intron Ccn + chr3L_4_17730001 chr3L_17730001 RAL-109_125b 2620 chr3L 17730837 17730877 chr3L 17738187 17738260 mdg1 9 7377 6.0 7.5 6.8 1.2 7423 chr3L 17730837 intron Ccn + chr3L 17734548 intron Ccn + chr3L 17738260 intron Ccn + chr3L_9_17730001 chr3L_17730001 RAL-109_125b 2621 chr3L 17789799 17789865 chr3L 17789925 17789991 8 125 9.5 7.0 8.2 0.9 192 chr3L 17789799 intergenic not near genes chr3L 17789895 intergenic not near genes chr3L 17789991 intergenic not near genes chr3L_8_17785001 chr3L_17785001 RAL-109_125b 2622 chr3L 17790579 17790636 chr3L 17790894 17790951 19 313 4.5 8.5 6.5 2.5 372 chr3L 17790579 intergenic CG42815 - chr3L 17790765 intergenic CG42815 - chr3L 17790951 intergenic CG42815 - chr3L_19_17790001 chr3L_17790001 RAL-109_125b 2623 chr3L 17799767 17799833 chr3L 17801604 17801670 S-element 27 1837 6.0 8.5 7.2 3.3 1903 chr3L 17799767 intron NUCB1 - chr3L 17800718 intron NUCB1 - chr3L 17801670 intron NUCB1 - chr3L_27_17800001 chr3L_17800001 RAL-109_125b 2624 chr3L 17884642 17884704 chr3L 17884792 17884833 10 148 5.5 0.0 2.8 2.6 191 chr3L 17884642 intergenic CG5506 - chr3L 17884738 intergenic CG5506 - chr3L 17884833 intergenic CG5506 - chr3L_10_17880001 chr3L_17880001 RAL-109_125b 2625 chr3L 17887828 17887870 chr3L 17887964 17888005 8 135 3.5 10.0 6.8 1.0 177 chr3L 17887828 intron CG7402 + chr3L 17887916 intron CG7402 + chr3L 17888005 intron CG7402 + chr3L_8_17885001 chr3L_17885001 RAL-109_125b 2626 chr3L 17896578 17896602 chr3L 17896705 17896729 11 127 19.5 14.0 16.8 0.6 151 chr3L 17896578 intergenic not near genes chr3L 17896654 intergenic not near genes chr3L 17896729 intergenic not near genes chr3L_11_17895001 chr3L_17895001 RAL-109_125b 2627 chr3L 17896603 17896636 chr3L 17896689 17896763 24 120 13.0 12.0 12.5 1.8 160 chr3L 17896603 intergenic not near genes chr3L 17896683 intergenic not near genes chr3L 17896763 intergenic not near genes chr3L_24_17895001 chr3L_17895001 RAL-109_125b 2628 chr3L 17918365 17918398 chr3L 17921176 17921246 opus 5 2844 7.0 4.5 5.8 0.7 2881 chr3L 17918365 intergenic not near genes chr3L 17919806 intergenic not near genes chr3L 17921246 intergenic not near genes chr3L_5_17915001 chr3L_17915001 RAL-109_125b 2629 chr3L 17991542 17991583 chr3L 17991670 17991711 14 128 10.5 8.5 9.5 1.3 169 chr3L 17991542 intron Eip75B - chr3L 17991626 intron Eip75B - chr3L 17991711 intron Eip75B - chr3L_14_17990001 chr3L_17990001 RAL-109_125b 2630 chr3L 18006177 18006196 chr3L 18006351 18006370 8 174 15.0 5.5 10.2 0.7 193 chr3L 18006177 intron Eip75B - chr3L 18006274 intron Eip75B - chr3L 18006370 intron Eip75B - chr3L_8_18005001 chr3L_18005001 RAL-109_125b 2631 chr3L 18006202 18006246 chr3L 18006347 18006420 14 168 9.0 5.0 7.0 1.8 218 chr3L 18006202 intron Eip75B - chr3L 18006311 intron Eip75B - chr3L 18006420 intron Eip75B - chr3L_14_18005001 chr3L_18005001 RAL-109_125b 2632 chr3L 18024000 18024051 chr3L 18024153 18024196 8 150 9.5 0.0 4.8 1.4 196 chr3L 18024000 intron Eip75B - chr3L 18024098 intron Eip75B - chr3L 18024196 intron Eip75B - chr3L_8_18020001 chr3L_18020001 RAL-109_125b 2633 chr3L 18047669 18047735 chr3L 18056776 18056842 roo 19 9106 4.5 5.5 5.0 3.2 9173 chr3L 18047669 intron Eip75B - chr3L 18052256 intron Eip75B - chr3L 18056842 intron Eip75B - chr3L_19_18050001 chr3L_18050001 RAL-109_125b 2634 chr3L 18113267 18113284 chr3L 18113414 18113431 7 146 5.5 9.0 7.2 0.9 164 chr3L 18113267 intron,intron CG32195 +,CG7341 + chr3L 18113349 intron,intron CG32195 +,CG7341 + chr3L 18113431 intron,intron CG32195 +,CG7341 + chr3L_7_18110001 chr3L_18110001 RAL-109_125b 2635 chr3L 18124366 18124419 chr3L 18124499 18124553 16 134 3.5 8.0 5.8 2.4 187 chr3L 18124366 intergenic not near genes chr3L 18124460 intergenic not near genes chr3L 18124553 intergenic not near genes chr3L_16_18120001 chr3L_18120001 RAL-109_125b 2636 chr3L 18134581 18134638 chr3L 18134768 18134825 24 186 5.0 13.5 9.2 2.4 244 chr3L 18134581 intergenic not near genes chr3L 18134703 intergenic not near genes chr3L 18134825 intergenic not near genes chr3L_24_18130001 chr3L_18130001 RAL-109_125b 2637 chr3L 18150266 18150327 chr3L 18150413 18150454 17 144 9.0 5.5 7.2 2.1 188 chr3L 18150266 intron CG7330 + chr3L 18150360 intron CG7330 + chr3L 18150454 intron CG7330 + chr3L_17_18150001 chr3L_18150001 RAL-109_125b 2638 chr3L 18172643 18172704 chr3L 18172769 18172830 22 125 10.0 10.0 10.0 2.0 187 chr3L 18172643 intron W - chr3L 18172736 intron W - chr3L 18172830 intron W - chr3L_22_18170001 chr3L_18170001 RAL-109_125b 2639 chr3L 18175769 18175834 chr3L 18176057 18176123 14 289 6.5 10.5 8.5 1.5 354 chr3L 18175769 intron W - chr3L 18175946 intron W - chr3L 18176123 intron W - chr3L_14_18175001 chr3L_18175001 RAL-109_125b 2640 chr3L 18198925 18198931 chr3L 24821493 24821494 8 6622564 0.5 19.5 10.0 0.7 6622569 chr3L 18198925 intergenic not near genes chr3L 21510210 intron M6 + chr3L 24821494 intergenic not near genes chr3L_8_21510001 chr3L_21510001 RAL-109_125b 2641 chr3L 18207865 18207929 chr3L 18208000 18208087 8 137 1.0 0.0 0.5 5.3 222 chr3L 18207865 intergenic not near genes chr3L 18207976 intergenic not near genes chr3L 18208087 intergenic not near genes chr3L_8_18205001 chr3L_18205001 RAL-109_125b 2642 chr3L 18220190 18220220 chr3L 18220635 18220665 4 445 3.5 7.0 5.2 0.6 475 chr3L 18220190 intergenic not near genes chr3L 18220428 intergenic not near genes chr3L 18220665 intergenic not near genes chr3L_4_18220001 chr3L_18220001 RAL-109_125b 2643 chr3L 18223116 18223188 chr3L 18223249 18223323 13 139 4.5 0.0 2.2 4.1 207 chr3L 18223116 intergenic not near genes chr3L 18223220 intergenic not near genes chr3L 18223323 intergenic not near genes chr3L_13_18220001 chr3L_18220001 RAL-109_125b 2644 chr3L 18226618 18226634 chr3L 18226759 18226775 6 141 9.0 7.5 8.2 0.7 157 chr3L 18226618 intergenic not near genes chr3L 18226696 intergenic not near genes chr3L 18226775 intergenic not near genes chr3L_6_18225001 chr3L_18225001 RAL-109_125b 2645 chr3L 18262423 18262487 chr3L 18262556 18262621 21 131 6.0 6.5 6.2 2.9 198 chr3L 18262423 intergenic not near genes chr3L 18262522 intergenic not near genes chr3L 18262621 intergenic not near genes chr3L_21_18260001 chr3L_18260001 RAL-109_125b 2646 chr3L 18267800 18267864 chr3L 18267915 18267949 28 121 7.5 5.5 6.5 3.7 149 chr3L 18267800 intergenic not near genes chr3L 18267874 intergenic not near genes chr3L 18267949 intergenic not near genes chr3L_28_18265001 chr3L_18265001 RAL-109_125b 2647 chr3L 18301302 18301380 chr3L 18301440 18301519 13 137 0.5 2.0 1.2 5.9 217 chr3L 18301302 intergenic CG13700 - chr3L 18301410 intergenic CG13700 - chr3L 18301519 intergenic CG13700 - chr3L_13_18300001 chr3L_18300001 RAL-109_125b 2648 chr3L 18344660 18344727 chr3L 18344789 18344821 17 125 3.5 5.0 4.2 3.3 161 chr3L 18344660 intergenic not near genes chr3L 18344740 intergenic not near genes chr3L 18344821 intergenic not near genes chr3L_17_18340001 chr3L_18340001 RAL-109_125b 2649 chr3L 18375935 18376001 chr3L 18376068 18376136 20 134 5.0 10.0 7.5 2.4 201 chr3L 18375935 intergenic not near genes chr3L 18376036 intergenic not near genes chr3L 18376136 intergenic not near genes chr3L_20_18375001 chr3L_18375001 RAL-109_125b 2650 chr3L 18406084 18406154 chr3L 18406210 18406280 21 125 1.5 3.5 2.5 6.0 196 chr3L 18406084 intergenic not near genes chr3L 18406182 intergenic not near genes chr3L 18406280 intergenic not near genes chr3L_21_18405001 chr3L_18405001 RAL-109_125b 2651 chr3L 18408686 18408756 chr3L 18408822 18408892 26 134 5.0 7.5 6.2 3.6 206 chr3L 18408686 intergenic not near genes chr3L 18408789 intergenic not near genes chr3L 18408892 intergenic not near genes chr3L_26_18405001 chr3L_18405001 RAL-109_125b 2652 chr3L 18436017 18436083 chr3L 18436165 18436231 16 148 5.0 3.0 4.0 3.2 214 chr3L 18436017 intergenic not near genes chr3L 18436124 intergenic not near genes chr3L 18436231 intergenic not near genes chr3L_16_18435001 chr3L_18435001 RAL-109_125b 2653 chr3L 18445204 18445279 chr3L 18445332 18445366 16 119 4.0 5.0 4.5 2.9 162 chr3L 18445204 intergenic not near genes chr3L 18445285 intergenic not near genes chr3L 18445366 intergenic not near genes chr3L_16_18445001 chr3L_18445001 RAL-109_125b 2654 chr3L 18448577 18448621 chr3L 18448719 18448763 10 142 4.0 1.0 2.5 2.9 186 chr3L 18448577 intergenic not near genes chr3L 18448670 intergenic not near genes chr3L 18448763 intergenic not near genes chr3L_10_18445001 chr3L_18445001 RAL-109_125b 2655 chr3L 18456224 18456278 chr3L 18456362 18456416 12 137 13.0 6.5 9.8 1.1 192 chr3L 18456224 intergenic CR44670 - chr3L 18456320 intergenic CR44670 - chr3L 18456416 3` UTR CR44670 - chr3L_12_18455001 chr3L_18455001 RAL-109_125b 2656 chr3L 18456289 18456300 chr3L 18456396 18456438 6 133 9.5 13.5 11.5 0.5 149 chr3L 18456289 intergenic CR44670 - chr3L 18456364 intergenic CR44670 - chr3L 18456438 3` UTR CR44670 - chr3L_6_18455001 chr3L_18455001 RAL-109_125b 2657 chr3L 18484678 18484685 chr3L 18488597 18488664 23 3940 39.0 52.5 45.8 0.5 3986 chr3L 18484678 intergenic AstC-R2 - chr3L 18486671 3` UTR AstC-R2 - chr3L 18488664 exon AstC-R2 - chr3L_23_18485001 chr3L_18485001 RAL-109_125b 2658 chr3L 18506092 18506155 chr3L 18509605 18509667 F-element 24 3513 5.5 8.0 6.8 3.1 3575 chr3L 18506092 intergenic not near genes chr3L 18507880 intergenic not near genes chr3L 18509667 intergenic not near genes chr3L_24_18505001 chr3L_18505001 RAL-109_125b 2659 chr3L 18528583 18528648 chr3L 18537794 18537859 roo 23 9210 7.5 5.5 6.5 3.1 9276 chr3L 18528583 intergenic not near genes chr3L 18533221 intergenic not near genes chr3L 18537859 intergenic not near genes chr3L_23_18530001 chr3L_18530001 RAL-109_125b 2660 chr3L 18546684 18546726 chr3L 18546800 18546868 18 135 8.5 5.0 6.8 2.3 184 chr3L 18546684 intergenic not near genes chr3L 18546776 intergenic not near genes chr3L 18546868 intergenic not near genes chr3L_18_18545001 chr3L_18545001 RAL-109_125b 2661 chr3L 18547735 18547803 chr3L 18548315 18548378 26 574 5.5 7.5 6.5 3.5 643 chr3L 18547735 intergenic not near genes chr3L 18548056 intergenic not near genes chr3L 18548378 intergenic not near genes chr3L_26_18545001 chr3L_18545001 RAL-109_125b 2662 chr3L 18590220 18590287 chr3L 18590352 18590390 16 125 8.5 11.0 9.8 1.5 170 chr3L 18590220 intergenic CG7271 + chr3L 18590305 intergenic CG7271 + chr3L 18590390 intergenic CG7271 + chr3L_16_18590001 chr3L_18590001 RAL-109_125b 2663 chr3L 18593908 18593981 chr3L 18595938 18596009 Doc 15 2030 9.0 2.0 5.5 2.3 2101 chr3L 18593908 intergenic term - chr3L 18594958 intergenic not near genes chr3L 18596009 intergenic CR45389 + chr3L_15_18590001 chr3L_18590001 RAL-109_125b 2664 chr3L 18603162 18603170 chr3L 18603292 18603300 5 130 0.0 15.0 7.5 0.6 138 chr3L 18603162 intron,intron CG13380 -,CG4174 - chr3L 18603231 intron,intron CG13380 -,CG4174 - chr3L 18603300 intron,intron CG13380 -,CG4174 - chr3L_5_18600001 chr3L_18600001 RAL-109_125b 2665 chr3L 18639994 18640060 chr3L 18640198 18640208 4 190 5.5 9.0 7.2 0.5 214 chr3L 18639994 intron MYPT-75D + chr3L 18640101 intron MYPT-75D + chr3L 18640208 intron MYPT-75D + chr3L_4_18640001 chr3L_18640001 RAL-109_125b 2666 chr3L 18688134 18688148 chr3L 18688273 18688277 5 136 15.0 18.5 16.8 0.3 143 chr3L 18688134 intergenic not near genes chr3L 18688206 intergenic not near genes chr3L 18688277 intergenic not near genes chr3L_5_18685001 chr3L_18685001 RAL-109_125b 2667 chr3L 18710746 18710785 chr3L 18718746 18718785 Stalker2 11 8000 3.5 6.0 4.8 1.9 8039 chr3L 18710746 intergenic not near genes chr3L 18714766 intergenic not near genes chr3L 18718785 intergenic not near genes chr3L_11_18710001 chr3L_18710001 RAL-109_125b 2668 chr3L 18721725 18721798 chr3L 18721866 18721939 29 140 10.5 8.0 9.2 2.8 214 chr3L 18721725 intergenic CG12477 - chr3L 18721832 intergenic CG12477 - chr3L 18721939 3` UTR CG12477 - chr3L_29_18720001 chr3L_18720001 RAL-109_125b 2669 chr3L 18741954 18741971 chr3L 18742090 18742107 6 135 16.5 5.5 11.0 0.5 153 chr3L 18741954 intergenic not near genes chr3L 18742030 intergenic not near genes chr3L 18742107 intergenic not near genes chr3L_6_18740001 chr3L_18740001 RAL-109_125b 2670 chr3L 18753498 18753563 chr3L 18753630 18753679 22 130 3.5 9.5 6.5 2.9 181 chr3L 18753498 intron ftz-f1 - chr3L 18753588 intron ftz-f1 - chr3L 18753679 intron ftz-f1 - chr3L_22_18750001 chr3L_18750001 RAL-109_125b 2671 chr3L 18772366 18772431 chr3L 18781097 18781162 roo 29 8728 8.5 11.0 9.8 2.7 8796 chr3L 18772366 intron ftz-f1 - chr3L 18776764 intron ftz-f1 - chr3L 18781162 intron ftz-f1 - chr3L_29_18775001 chr3L_18775001 RAL-109_125b 2672 chr3L 18784343 18784399 chr3L 18784482 18784538 14 139 6.0 9.5 7.8 1.6 195 chr3L 18784343 intron ftz-f1 - chr3L 18784440 intron ftz-f1 - chr3L 18784538 intron ftz-f1 - chr3L_14_18780001 chr3L_18780001 RAL-109_125b 2673 chr3L 18792534 18792598 chr3L 18792666 18792730 22 131 5.5 9.0 7.2 2.7 196 chr3L 18792534 intron ftz-f1 - chr3L 18792632 intron ftz-f1 - chr3L 18792730 intron ftz-f1 - chr3L_22_18790001 chr3L_18790001 RAL-109_125b 2674 chr3L 18797278 18797325 chr3L 18797412 18797459 13 134 5.0 10.5 7.8 1.5 181 chr3L 18797278 intron ftz-f1 - chr3L 18797368 intron ftz-f1 - chr3L 18797459 intron ftz-f1 - chr3L_13_18795001 chr3L_18795001 RAL-109_125b 2675 chr3L 18810100 18810177 chr3L 18810227 18810309 16 132 6.5 1.0 3.8 3.3 209 chr3L 18810100 intron CG14073 - chr3L 18810204 intron CG14073 - chr3L 18810309 intron CG14073 - chr3L_16_18810001 chr3L_18810001 RAL-109_125b 2676 chr3L 18831638 18831645 chr3L 18831842 18831849 5 204 11.0 8.5 9.8 0.5 211 chr3L 18831638 intron Indy - chr3L 18831744 intron Indy - chr3L 18831849 intron Indy - chr3L_5_18830001 chr3L_18830001 RAL-109_125b 2677 chr3L 18861720 18861789 chr3L 18861863 18861917 26 138 9.5 9.0 9.2 2.5 197 chr3L 18861720 intergenic not near genes chr3L 18861818 intergenic not near genes chr3L 18861917 intergenic not near genes chr3L_26_18860001 chr3L_18860001 RAL-109_125b 2678 chr3L 18924432 18924509 chr3L 18924558 18924635 19 125 4.0 6.5 5.2 3.1 203 chr3L 18924432 intron CG32204 - chr3L 18924534 intron CG32204 - chr3L 18924635 intron CG32204 - chr3L_19_18920001 chr3L_18920001 RAL-109_125b 2679 chr3L 18929956 18929982 chr3L 18930052 18930116 11 130 4.0 9.0 6.5 1.5 160 chr3L 18929956 intron CG32204 - chr3L 18930036 intron CG32204 - chr3L 18930116 exon CG32204 - chr3L_11_18930001 chr3L_18930001 RAL-109_125b 2680 chr3L 18933582 18933657 chr3L 18933726 18933800 26 143 7.0 8.0 7.5 3.1 218 chr3L 18933582 intron CG32204 - chr3L 18933691 intron CG32204 - chr3L 18933800 intron CG32204 - chr3L_26_18930001 chr3L_18930001 RAL-109_125b 2681 chr3L 18935789 18935860 chr3L 18935928 18935999 16 138 7.0 7.0 7.0 2.0 210 chr3L 18935789 intron CG32204 - chr3L 18935894 intron CG32204 - chr3L 18935999 intron CG32204 - chr3L_16_18935001 chr3L_18935001 RAL-109_125b 2682 chr3L 18969554 18969621 chr3L 18969700 18969767 26 144 9.5 8.5 9.0 2.6 213 chr3L 18969554 intergenic not near genes chr3L 18969660 intergenic not near genes chr3L 18969767 intergenic not near genes chr3L_26_18965001 chr3L_18965001 RAL-109_125b 2683 chr3L 19015128 19015210 chr3L 19015261 19015340 16 131 5.0 3.5 4.2 3.1 212 chr3L 19015128 intron nkd - chr3L 19015234 intron nkd - chr3L 19015340 intron nkd - chr3L_16_19015001 chr3L_19015001 RAL-109_125b 2684 chr3L 19026804 19026820 chr3L 19026934 19026950 5 130 12.5 13.5 13.0 0.4 146 chr3L 19026804 intron nkd - chr3L 19026877 intron nkd - chr3L 19026950 intron nkd - chr3L_5_19025001 chr3L_19025001 RAL-109_125b 2685 chr3L 19114425 19114496 chr3L 19115001 19115051 29 569 7.0 9.5 8.2 3.2 626 chr3L 19114425 intron CG14082 - chr3L 19114738 intron CG14082 - chr3L 19115051 intron CG14082 - chr3L_29_19110001 chr3L_19110001 RAL-109_125b 2686 chr3L 19208014 19208091 chr3L 19209438 19209474 Doc 22 1417 6.0 6.5 6.2 3.1 1460 chr3L 19208014 intron fz2 - chr3L 19208744 intron fz2 - chr3L 19209474 intron fz2 - chr3L_22_19205001 chr3L_19205001 RAL-109_125b 2687 chr3L 19210064 19210141 chr3L 19210210 19210262 12 140 0.0 6.5 3.2 2.9 198 chr3L 19210064 intron fz2 - chr3L 19210163 intron fz2 - chr3L 19210262 intron fz2 - chr3L_12_19210001 chr3L_19210001 RAL-109_125b 2688 chr3L 19220633 19220636 chr3L 22908066 22908066 32 3687432 42.0 35.5 38.8 0.8 3687433 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908066 intergenic not near genes chr3L_32_21060001 chr3L_21060001 RAL-109_125b 2689 chr3L 19220637 19220637 chr3L 22908066 22908066 9 3687429 43.0 35.5 39.2 0.2 3687429 chr3L 19220637 intron fz2 - chr3L 21064352 intron siz + chr3L 22908066 intergenic not near genes chr3L_9_21060001 chr3L_21060001 RAL-109_125b 2690 chr3L 19319595 19319642 chr3L 19319721 19319768 18 126 2.0 10.0 6.0 2.6 173 chr3L 19319595 intron pip - chr3L 19319682 intron pip - chr3L 19319768 intron pip - chr3L_18_19315001 chr3L_19315001 RAL-109_125b 2691 chr3L 19398890 19398930 chr3L 19403657 19403697 F-element 10 4765 4.0 7.5 5.8 1.5 4807 chr3L 19398890 intron CG32206 - chr3L 19401294 intron CG32206 - chr3L 19403697 intron CG32206 - chr3L_10_19400001 chr3L_19400001 RAL-109_125b 2692 chr3L 19410330 19410348 chr3L 19410451 19410474 7 123 18.0 8.5 13.2 0.5 144 chr3L 19410330 intron CG32206 - chr3L 19410402 intron CG32206 - chr3L 19410474 intron CG32206 - chr3L_7_19410001 chr3L_19410001 RAL-109_125b 2693 chr3L 19410352 19410399 chr3L 19410447 19410515 11 121 6.0 7.5 6.8 1.4 163 chr3L 19410352 intron CG32206 - chr3L 19410434 intron CG32206 - chr3L 19410515 intron CG32206 - chr3L_11_19410001 chr3L_19410001 RAL-109_125b 2694 chr3L 19527881 19527937 chr3L 19528010 19528066 18 126 8.0 5.5 6.8 2.3 185 chr3L 19527881 intergenic not near genes chr3L 19527974 intergenic not near genes chr3L 19528066 intergenic not near genes chr3L_18_19525001 chr3L_19525001 RAL-109_125b 2695 chr3L 19544210 19544258 chr3L 19544315 19544381 6 121 8.0 12.0 10.0 0.5 171 chr3L 19544210 intergenic CG9279 -,l(3)76BDr - chr3L 19544296 intergenic l(3)76BDr -,CG9279 - chr3L 19544381 3` UTR l(3)76BDr - chr3L_6_19540001 chr3L_19540001 RAL-109_125b 2696 chr3L 19636823 19636848 chr3L 19636975 19636976 9 149 25.5 16.0 20.8 0.4 153 chr3L 19636823 intergenic CG8786 - chr3L 19636900 intergenic CG8786 - chr3L 19636976 intergenic CG8786 - chr3L_9_19635001 chr3L_19635001 RAL-109_125b 2697 chr3L 19641386 19641458 chr3L 19641534 19641606 41 142 10.0 8.5 9.2 4.0 220 chr3L 19641386 intron CG8786 - chr3L 19641496 intron CG8786 - chr3L 19641606 intron CG8786 - chr3L_41_19640001 chr3L_19640001 RAL-109_125b 2698 chr3L 19703805 19703872 chr3L 19704009 19704076 34 202 11.5 9.0 10.2 3.0 271 chr3L 19703805 intron serp - chr3L 19703940 intron serp - chr3L 19704076 intron serp - chr3L_34_19700001 chr3L_19700001 RAL-109_125b 2699 chr3L 19820264 19820319 chr3L 19827863 19827907 412 17 7592 5.0 10.0 7.5 2.0 7643 chr3L 19820264 intron Deaf1 + chr3L 19824086 intron Deaf1 + chr3L 19827907 intron Deaf1 + chr3L_17_19820001 chr3L_19820001 RAL-109_125b 2700 chr3L 19848480 19848489 chr3L 19857720 19857730 roo 8 9241 14.5 14.0 14.2 0.5 9250 chr3L 19848480 intron Papss + chr3L 19853105 intron Papss + chr3L 19857730 intron Papss + chr3L_8_19850001 chr3L_19850001 RAL-109_125b 2701 chr3L 19848490 19848528 chr3L 19857718 19857769 roo 22 9235 6.0 14.0 10.0 2.0 9279 chr3L 19848490 intron Papss + chr3L 19853130 intron Papss + chr3L 19857769 intron Papss + chr3L_22_19850001 chr3L_19850001 RAL-109_125b 2702 chr3L 19861770 19861842 chr3L 19863608 19863673 S-element 21 1834 6.5 5.5 6.0 3.0 1903 chr3L 19861770 5` UTR CR45433 + chr3L 19862722 intergenic not near genes chr3L 19863673 intergenic not near genes chr3L_21_19860001 chr3L_19860001 RAL-109_125b 2703 chr3L 19933486 19933561 chr3L 19934358 19934433 20 870 4.0 6.0 5.0 3.3 947 chr3L 19933486 intergenic CR45678 + chr3L 19933960 5` UTR CR45678 + chr3L 19934433 intergenic CR45678 + chr3L_20_19930001 chr3L_19930001 RAL-109_125b 2704 chr3L 19961221 19961287 chr3L 19961348 19961414 16 126 9.0 6.0 7.5 1.9 193 chr3L 19961221 intron Ac76E + chr3L 19961318 intron Ac76E + chr3L 19961414 intron Ac76E + chr3L_16_19960001 chr3L_19960001 RAL-109_125b 2705 chr3L 19981158 19981232 chr3L 19981288 19981362 21 129 12.0 8.5 10.2 1.9 204 chr3L 19981158 intergenic not near genes chr3L 19981260 intergenic CG17732 + chr3L 19981362 intergenic CG17732 + chr3L_21_19980001 chr3L_19980001 RAL-109_125b 2706 chr3L 20083389 20083413 chr3L 20083529 20083534 6 138 24.5 16.0 20.2 0.3 145 chr3L 20083389 intron sNPF-R - chr3L 20083462 intron sNPF-R - chr3L 20083534 intron sNPF-R - chr3L_6_20080001 chr3L_20080001 RAL-109_125b 2707 chr3L 20096050 20096120 chr3L 20096194 20096269 8 146 3.5 0.0 1.8 2.9 219 chr3L 20096050 intergenic not near genes chr3L 20096160 intergenic not near genes chr3L 20096269 intergenic not near genes chr3L_8_20095001 chr3L_20095001 RAL-109_125b 2708 chr3L 20100420 20100497 chr3L 20100551 20100603 28 126 3.5 7.5 5.5 4.3 183 chr3L 20100420 intron CG14186 - chr3L 20100512 intron CG14186 - chr3L 20100603 exon CG14186 - chr3L_28_20100001 chr3L_20100001 RAL-109_125b 2709 chr3L 20113615 20113681 chr3L 20122922 20122986 roo 34 9307 7.5 5.5 6.5 4.5 9371 chr3L 20113615 intergenic not near genes chr3L 20118300 intergenic not near genes chr3L 20122986 intergenic not near genes chr3L_34_20115001 chr3L_20115001 RAL-109_125b 2710 chr3L 20143040 20143066 chr3L 20143170 20143196 11 129 11.0 11.0 11.0 0.9 156 chr3L 20143040 intergenic not near genes chr3L 20143118 intergenic not near genes chr3L 20143196 intergenic not near genes chr3L_11_20140001 chr3L_20140001 RAL-109_125b 2711 chr3L 20143071 20143104 chr3L 20143168 20143234 9 126 10.0 10.0 10.0 0.8 163 chr3L 20143071 intergenic not near genes chr3L 20143152 intergenic not near genes chr3L 20143234 intergenic not near genes chr3L_9_20140001 chr3L_20140001 RAL-109_125b 2712 chr3L 20148241 20148307 chr3L 20148381 20148445 23 136 8.0 6.5 7.2 2.8 204 chr3L 20148241 intergenic not near genes chr3L 20148343 intergenic not near genes chr3L 20148445 intergenic not near genes chr3L_23_20145001 chr3L_20145001 RAL-109_125b 2713 chr3L 20212570 20212579 chr3L 20218196 20218206 mdg3 4 5627 19.0 0.0 9.5 0.4 5636 chr3L 20212570 intergenic CG7017 - chr3L 20215388 intergenic not near genes chr3L 20218206 intergenic CG6933 - chr3L_4_20215001 chr3L_20215001 RAL-109_125b 2714 chr3L 20218180 20218223 chr3L 20218346 20218389 13 165 0.0 10.5 5.2 2.1 209 chr3L 20218180 intergenic CG6933 - chr3L 20218284 intergenic CG6933 - chr3L 20218389 intergenic CG6933 - chr3L_13_20215001 chr3L_20215001 RAL-109_125b 2715 chr3L 20231104 20231161 chr3L 20231279 20231342 15 180 9.0 7.0 8.0 1.7 238 chr3L 20231104 intergenic not near genes chr3L 20231223 intergenic CG13813 + chr3L 20231342 intergenic CG13813 + chr3L_15_20230001 chr3L_20230001 RAL-109_125b 2716 chr3L 20254985 20255036 chr3L 20255114 20255165 14 128 10.5 5.5 8.0 1.6 180 chr3L 20254985 intron rdgC + chr3L 20255075 intron rdgC + chr3L 20255165 intron rdgC + chr3L_14_20255001 chr3L_20255001 RAL-109_125b 2717 chr3L 20256610 20256638 chr3L 20256761 20256782 8 149 6.0 6.5 6.2 1.1 172 chr3L 20256610 exon rdgC + chr3L 20256696 intron rdgC + chr3L 20256782 intron rdgC + chr3L_8_20255001 chr3L_20255001 RAL-109_125b 2718 chr3L 20256640 20256665 chr3L 20256747 20256785 12 148 3.5 5.0 4.2 2.3 145 chr3L 20256640 intron rdgC + chr3L 20256712 intron rdgC + chr3L 20256785 intron rdgC + chr3L_12_20255001 chr3L_20255001 RAL-109_125b 2719 chr3L 20264268 20264285 chr3L 20264404 20264421 10 136 13.5 9.5 11.5 0.8 153 chr3L 20264268 3` UTR rdgC + chr3L 20264344 3` UTR rdgC + chr3L 20264421 3` UTR rdgC + chr3L_10_20260001 chr3L_20260001 RAL-109_125b 2720 chr3L 20264302 20264332 chr3L 20264397 20264468 10 132 6.5 8.0 7.2 1.2 166 chr3L 20264302 3` UTR rdgC + chr3L 20264385 3` UTR rdgC + chr3L 20264468 3` UTR rdgC + chr3L_10_20260001 chr3L_20260001 RAL-109_125b 2721 chr3L 20447716 20447728 chr3L 20447849 20447855 4 129 5.0 13.5 9.2 0.4 139 chr3L 20447716 intron CG5910 + chr3L 20447786 intron CG5910 + chr3L 20447855 intron CG5910 + chr3L_4_20445001 chr3L_20445001 RAL-109_125b 2722 chr3L 20462541 20462601 chr3L 20462672 20462732 25 128 6.5 8.5 7.5 2.9 191 chr3L 20462541 intron atk - chr3L 20462636 intron atk - chr3L 20462732 intron atk - chr3L_25_20460001 chr3L_20460001 RAL-109_125b 2723 chr3L 20476716 20476728 chr3L 20484365 20484377 springer 5 7649 17.5 9.5 13.5 0.3 7661 chr3L 20476716 3` UTR isoQC + chr3L 20480546 intergenic not near genes chr3L 20484377 3` UTR ZnT77C - chr3L_5_20480001 chr3L_20480001 RAL-109_125b 2724 chr3L 20476733 20476775 chr3L 20484351 20484420 springer 18 7644 8.5 7.5 8.0 2.0 7687 chr3L 20476733 3` UTR isoQC + chr3L 20480576 intergenic not near genes chr3L 20484420 3` UTR ZnT77C - chr3L_18_20480001 chr3L_20480001 RAL-109_125b 2725 chr3L 20487622 20487671 chr3L 20488123 20488172 INE-1 21 500 10.0 7.0 8.5 2.2 550 chr3L 20487622 intron ZnT77C - chr3L 20487897 intron ZnT77C - chr3L 20488172 exon ZnT77C - chr3L_21_20485001 chr3L_20485001 RAL-109_125b 2726 chr3L 20525228 20525228 chr3L 22908066 22908066 4 2382838 25.0 35.5 30.2 0.1 2382838 chr3L 20525228 intron CG4825 - chr3L 21716647 intergenic not near genes chr3L 22908066 intergenic not near genes chr3L_4_21715001 chr3L_21715001 RAL-109_125b 2727 chr3L 20525229 20525229 chr3L 22908066 22908067 4 2382838 24.5 35.5 30.0 0.1 2382838 chr3L 20525229 intron CG4825 - chr3L 21716648 intergenic not near genes chr3L 22908067 intergenic not near genes chr3L_4_21715001 chr3L_21715001 RAL-109_125b 2728 chr3L 20525229 20525229 chr3L 24821492 24821494 5 4296264 24.5 19.0 21.8 0.2 4296265 chr3L 20525229 intron CG4825 - chr3L 22673362 intron CG14457 + chr3L 24821494 intergenic not near genes chr3L_5_22670001 chr3L_22670001 RAL-109_125b 2729 chr3L 20590024 20590047 chr3L 20590613 20590635 412 4 589 12.0 5.5 8.8 0.4 611 chr3L 20590024 intergenic not near genes chr3L 20590330 intergenic not near genes chr3L 20590635 intergenic not near genes chr3L_4_20590001 chr3L_20590001 RAL-109_125b 2730 chr3L 20590053 20590085 chr3L 20590610 20590617 412 9 573 8.0 5.0 6.5 1.2 564 chr3L 20590053 intergenic not near genes chr3L 20590335 intergenic not near genes chr3L 20590617 intergenic not near genes chr3L_9_20590001 chr3L_20590001 RAL-109_125b 2731 chr3L 20590090 20590097 chr3L 20590609 20590661 412 4 555 8.0 5.0 6.5 0.5 571 chr3L 20590090 intergenic not near genes chr3L 20590376 intergenic not near genes chr3L 20590661 intergenic not near genes chr3L_4_20590001 chr3L_20590001 RAL-109_125b 2732 chr3L 20821257 20821302 chr3L 20824776 20824821 NOF 12 3518 10.0 9.5 9.8 1.1 3564 chr3L 20821257 intron Pka-R1 + chr3L 20823039 intron Pka-R1 + chr3L 20824821 intron Pka-R1 + chr3L_12_20820001 chr3L_20820001 RAL-109_125b 2733 chr3L 20849225 20849287 chr3L 20849354 20849405 22 128 10.5 10.5 10.5 1.9 180 chr3L 20849225 intron CG32432 - chr3L 20849315 intron CG32432 - chr3L 20849405 intron CG32432 - chr3L_22_20845001 chr3L_20845001 RAL-109_125b 2734 chr3L 20893499 20893572 chr3L 20893628 20893701 11 128 5.5 5.5 5.5 1.7 202 chr3L 20893499 intergenic not near genes chr3L 20893600 intergenic not near genes chr3L 20893701 intergenic not near genes chr3L_11_20890001 chr3L_20890001 RAL-109_125b 2735 chr3L 20896894 20896937 chr3L 20897008 20897067 12 125 12.5 8.0 10.2 1.1 173 chr3L 20896894 3` UTR Sfp77F - chr3L 20896980 3` UTR Sfp77F - chr3L 20897067 3` UTR Sfp77F - chr3L_12_20895001 chr3L_20895001 RAL-109_125b 2736 chr3L 20931745 20931819 chr3L 20931883 20931957 14 136 4.0 1.5 2.8 3.7 212 chr3L 20931745 intron fng - chr3L 20931851 intron fng - chr3L 20931957 intron fng - chr3L_14_20930001 chr3L_20930001 RAL-109_125b 2737 chr3L 20946160 20946224 chr3L 20946293 20946314 16 132 10.0 8.0 9.0 1.6 154 chr3L 20946160 intron fng - chr3L 20946237 intron fng - chr3L 20946314 intron fng - chr3L_16_20945001 chr3L_20945001 RAL-109_125b 2738 chr3L 21014883 21014947 chr3L 21023396 21023418 Tirant 21 8517 6.5 6.5 6.5 2.8 8535 chr3L 21014883 intron skd - chr3L 21019150 intron skd - chr3L 21023418 intron skd - chr3L_21_21015001 chr3L_21015001 RAL-109_125b 2739 chr3L 21041960 21041997 chr3L 21042082 21042124 18 120 10.0 9.0 9.5 1.7 164 chr3L 21041960 intron siz + chr3L 21042042 intron siz + chr3L 21042124 intron siz + chr3L_18_21040001 chr3L_21040001 RAL-109_125b 2740 chr3L 21151830 21151845 chr3L 21156960 21156979 flea 10 5133 16.0 7.0 11.5 0.8 5149 chr3L 21151830 intron Ac78C - chr3L 21154404 intron Ac78C - chr3L 21156979 intron Ac78C - chr3L_10_21150001 chr3L_21150001 RAL-109_125b 2741 chr3L 21151850 21151880 chr3L 21156953 21157014 flea 11 5131 11.0 5.5 8.2 1.2 5164 chr3L 21151850 intron Ac78C - chr3L 21154432 intron Ac78C - chr3L 21157014 intron Ac78C - chr3L_11_21150001 chr3L_21150001 RAL-109_125b 2742 chr3L 21159336 21159398 chr3L 21159472 21159539 25 139 6.0 6.5 6.2 3.5 203 chr3L 21159336 intron Ac78C - chr3L 21159438 intron Ac78C - chr3L 21159539 intron Ac78C - chr3L_25_21155001 chr3L_21155001 RAL-109_125b 2743 chr3L 21243722 21243768 chr3L 21251310 21251315 412 6 7580 9.0 7.0 8.0 0.7 7593 chr3L 21243722 intron Eip78C + chr3L 21247518 intron Eip78C + chr3L 21251315 intron Eip78C + chr3L_6_21245001 chr3L_21245001 RAL-109_125b 2744 chr3L 21306105 21306172 chr3L 21315314 21315381 roo 29 9208 9.5 9.0 9.2 2.8 9276 chr3L 21306105 3` UTR CG7632 + chr3L 21310743 intron Pc - chr3L 21315381 3` UTR Pc - chr3L_29_21310001 chr3L_21310001 RAL-109_125b 2745 chr3L 21319483 21319554 chr3L 21319623 21319693 28 137 8.0 5.5 6.8 3.6 210 chr3L 21319483 5` UTR Rab26 + chr3L 21319588 5` UTR Rab26 + chr3L 21319693 5` UTR Rab26 + chr3L_28_21315001 chr3L_21315001 RAL-109_125b 2746 chr3L 21361679 21361749 chr3L 21362683 21362753 G2 28 1003 6.0 7.5 6.8 3.6 1074 chr3L 21361679 intergenic CG32440 + chr3L 21362216 intergenic not near genes chr3L 21362753 intergenic not near genes chr3L_28_21360001 chr3L_21360001 RAL-109_125b 2747 chr3L 21372677 21372726 chr3L 21379235 21379283 McClintock 14 6558 6.5 3.5 5.0 2.3 6606 chr3L 21372677 intergenic not near genes chr3L 21375980 intergenic not near genes chr3L 21379283 intergenic not near genes chr3L_14_21375001 chr3L_21375001 RAL-109_125b 2748 chr3L 21460443 21460449 chr3L 21460574 21460582 4 131 12.0 10.0 11.0 0.3 139 chr3L 21460443 intergenic not near genes chr3L 21460512 intergenic not near genes chr3L 21460582 intergenic not near genes chr3L_4_21460001 chr3L_21460001 RAL-109_125b 2749 chr3L 21460455 21460484 chr3L 21460558 21460610 14 133 4.0 7.0 5.5 2.2 155 chr3L 21460455 intergenic not near genes chr3L 21460532 intergenic not near genes chr3L 21460610 intergenic not near genes chr3L_14_21460001 chr3L_21460001 RAL-109_125b 2750 chr3L 21498834 21498855 chr3L 21500482 21500496 1360 13 1672 12.5 9.5 11.0 1.1 1662 chr3L 21498834 intron Glg1 - chr3L 21499665 intron Glg1 - chr3L 21500496 intron Glg1 - chr3L_13_21495001 chr3L_21495001 RAL-109_125b 2751 chr3L 21639149 21639220 chr3L 21639278 21639349 30 125 5.5 6.5 6.0 4.3 200 chr3L 21639149 intergenic CG32444 +,CG32445 + chr3L 21639249 intergenic CG32445 +,CG32444 + chr3L 21639349 intergenic CG32445 +,CG32444 + chr3L_30_21635001 chr3L_21635001 RAL-109_125b 2752 chr3L 21656959 21657018 chr3L 21657102 21657161 18 137 7.5 11.5 9.5 1.7 202 chr3L 21656959 intron CG43980 + chr3L 21657060 intron CG43980 + chr3L 21657161 intron CG43980 + chr3L_18_21655001 chr3L_21655001 RAL-109_125b 2753 chr3L 21712139 21712197 chr3L 21712268 21712291 10 119 8.5 9.0 8.8 1.0 152 chr3L 21712139 intergenic not near genes chr3L 21712215 intergenic not near genes chr3L 21712291 intergenic not near genes chr3L_10_21710001 chr3L_21710001 RAL-109_125b 2754 chr3L 21738576 21738590 chr3L 21738718 21738732 4 142 13.0 6.5 9.8 0.4 156 chr3L 21738576 intergenic CG14567 - chr3L 21738654 intergenic CG14567 - chr3L 21738732 intergenic CG14567 - chr3L_4_21735001 chr3L_21735001 RAL-109_125b 2755 chr3L 21738592 21738639 chr3L 21738714 21738781 15 141 7.0 6.0 6.5 2.0 189 chr3L 21738592 intergenic CG14567 - chr3L 21738686 intergenic CG14567 - chr3L 21738781 intergenic CG14567 - chr3L_15_21735001 chr3L_21735001 RAL-109_125b 2756 chr3L 21749285 21749323 chr3L 21754479 21754532 Doc 9 5204 11.0 9.0 10.0 0.8 5247 chr3L 21749285 intron Syn1 - chr3L 21751908 intron Syn1 - chr3L 21754532 intron Syn1 - chr3L_9_21750001 chr3L_21750001 RAL-109_125b 2757 chr3L 21769008 21769074 chr3L 21769145 21769211 21 136 3.5 5.5 4.5 3.8 203 chr3L 21769008 intron,intron Syn1 -,CG42689 + chr3L 21769110 intron,intron Syn1 -,CG42689 + chr3L 21769211 intron,intron Syn1 -,CG42689 + chr3L_21_21765001 chr3L_21765001 RAL-109_125b 2758 chr3L 21769991 21770040 chr3L 21770128 21770173 17 132 7.5 10.0 8.8 1.7 182 chr3L 21769991 5` UTR,intron,5` UTR Syn1 -,CG42689 +,CG7370 + chr3L 21770082 5` UTR,intron,intron Syn1 -,CG42689 +,CG7370 + chr3L 21770173 5` UTR,intron,5` UTR Syn1 -,CG42689 +,CG7370 + chr3L_17_21770001 chr3L_21770001 RAL-109_125b 2759 chr3L 21776635 21776697 chr3L 21776768 21776834 9 136 0.0 6.5 3.2 2.1 199 chr3L 21776635 intron,intron CG42689 +,CG42552 + chr3L 21776734 intron,intron CG42689 +,CG42552 + chr3L 21776834 exon,intron CG42689 +,CG42552 + chr3L_9_21775001 chr3L_21775001 RAL-109_125b 2760 chr3L 21785730 21785788 chr3L 21786095 21786161 19 368 11.5 7.0 9.2 1.9 431 chr3L 21785730 intergenic not near genes chr3L 21785946 intergenic not near genes chr3L 21786161 intergenic not near genes chr3L_19_21785001 chr3L_21785001 RAL-109_125b 2761 chr3L 21809933 21809962 chr3L 21810071 21810100 6 130 19.0 17.5 18.2 0.3 167 chr3L 21809933 intron eg + chr3L 21810016 intron eg + chr3L 21810100 intron eg + chr3L_6_21810001 chr3L_21810001 RAL-109_125b 2762 chr3L 21852220 21852259 chr3L 21852362 21852362 8 137 8.0 8.0 8.0 0.9 142 chr3L 21852220 intron mub + chr3L 21852291 intron mub + chr3L 21852362 intron mub + chr3L_8_21850001 chr3L_21850001 RAL-109_125b 2763 chr3L 21852261 21852283 chr3L 21852350 21852426 11 125 5.0 6.0 5.5 1.7 165 chr3L 21852261 intron mub + chr3L 21852344 intron mub + chr3L 21852426 intron mub + chr3L_11_21850001 chr3L_21850001 RAL-109_125b 2764 chr3L 21905444 21905514 chr3L 21905593 21905611 24 140 4.5 4.5 4.5 4.4 167 chr3L 21905444 intron mub + chr3L 21905528 intron mub + chr3L 21905611 intron mub + chr3L_24_21905001 chr3L_21905001 RAL-109_125b 2765 chr3L 22058248 22058320 chr3L 22058575 22058647 27 326 9.0 9.0 9.0 2.7 399 chr3L 22058248 intron Oct-TyrR + chr3L 22058448 intron Oct-TyrR + chr3L 22058647 intron Oct-TyrR + chr3L_27_22055001 chr3L_22055001 RAL-109_125b 2766 chr3L 22092770 22092822 chr3L 22092921 22092973 26 151 13.0 8.0 10.5 2.3 203 chr3L 22092770 intergenic not near genes chr3L 22092872 intergenic not near genes chr3L 22092973 intergenic not near genes chr3L_26_22090001 chr3L_22090001 RAL-109_125b 2767 chr3L 22099648 22099692 chr3L 22105875 22105918 3S18 15 6234 9.5 10.5 10.0 1.4 6270 chr3L 22099648 intergenic not near genes chr3L 22102783 intergenic not near genes chr3L 22105918 intergenic not near genes chr3L_15_22100001 chr3L_22100001 RAL-109_125b 2768 chr3L 22106544 22106555 chr3L 22106676 22106686 4 132 21.5 4.5 13.0 0.3 142 chr3L 22106544 intergenic not near genes chr3L 22106615 intergenic not near genes chr3L 22106686 intergenic not near genes chr3L_4_22105001 chr3L_22105001 RAL-109_125b 2769 chr3L 22124758 22124828 chr3L 22124891 22124961 26 130 10.0 9.0 9.5 2.5 203 chr3L 22124758 intergenic not near genes chr3L 22124860 intergenic not near genes chr3L 22124961 intergenic not near genes chr3L_26_22120001 chr3L_22120001 RAL-109_125b 2770 chr3L 22130454 22130521 chr3L 22130650 22130717 23 194 5.0 6.0 5.5 3.5 263 chr3L 22130454 intergenic not near genes chr3L 22130586 intergenic not near genes chr3L 22130717 intergenic not near genes chr3L_23_22130001 chr3L_22130001 RAL-109_125b 2771 chr3L 22169419 22169483 chr3L 22169546 22169626 19 140 8.0 10.5 9.2 1.9 207 chr3L 22169419 intron olf413 + chr3L 22169522 intron olf413 + chr3L 22169626 intron olf413 + chr3L_19_22165001 chr3L_22165001 RAL-109_125b 2772 chr3L 22194282 22194290 chr3L 22194406 22194410 5 124 15.5 11.0 13.2 0.4 128 chr3L 22194282 intron olf413 + chr3L 22194346 intron olf413 + chr3L 22194410 intron olf413 + chr3L_5_22190001 chr3L_22190001 RAL-109_125b 2773 chr3L 22194293 22194309 chr3L 22194405 22194410 6 117 12.0 10.0 11.0 0.5 117 chr3L 22194293 intron olf413 + chr3L 22194352 intron olf413 + chr3L 22194410 intron olf413 + chr3L_6_22190001 chr3L_22190001 RAL-109_125b 2774 chr3L 22308619 22308643 chr3L 22308753 22308777 5 131 20.5 0.5 10.5 0.4 158 chr3L 22308619 intron Ten-m - chr3L 22308698 intron Ten-m - chr3L 22308777 intron Ten-m - chr3L_5_22305001 chr3L_22305001 RAL-109_125b 2775 chr3L 22308648 22308696 chr3L 22308749 22308765 10 109 8.5 0.5 4.5 1.8 117 chr3L 22308648 intron Ten-m - chr3L 22308706 intron Ten-m - chr3L 22308765 intron Ten-m - chr3L_10_22305001 chr3L_22305001 RAL-109_125b 2776 chr3L 22322324 22322368 chr3L 22323185 22323234 8 865 22.0 22.5 22.2 0.3 910 chr3L 22322324 intron Ten-m - chr3L 22322779 intron Ten-m - chr3L 22323234 intron Ten-m - chr3L_8_22320001 chr3L_22320001 RAL-109_125b 2777 chr3L 22328013 22328040 chr3L 22328161 22328188 9 145 15.0 9.5 12.2 0.7 175 chr3L 22328013 intron Ten-m - chr3L 22328100 intron Ten-m - chr3L 22328188 intron Ten-m - chr3L_9_22325001 chr3L_22325001 RAL-109_125b 2778 chr3L 22328042 22328087 chr3L 22328160 22328226 12 130 4.5 9.5 7.0 1.5 184 chr3L 22328042 intron Ten-m - chr3L 22328134 intron Ten-m - chr3L 22328226 intron Ten-m - chr3L_12_22325001 chr3L_22325001 RAL-109_125b 2779 chr3L 22408162 22408212 chr3L 22410539 22410597 21 2363 47.5 41.0 44.2 0.5 2435 chr3L 22408162 intergenic Ten-m - chr3L 22409380 intergenic not near genes chr3L 22410597 intergenic not near genes chr3L_21_22405001 chr3L_22405001 RAL-109_125b 2780 chr3L 22447152 22447220 chr3L 22447287 22447361 26 137 6.0 7.5 6.8 3.3 209 chr3L 22447152 intergenic not near genes chr3L 22447256 intergenic not near genes chr3L 22447361 intergenic not near genes chr3L_26_22445001 chr3L_22445001 RAL-109_125b 2781 chr3L 22477028 22477084 chr3L 22477151 22477225 13 138 0.5 7.5 4.0 2.6 197 chr3L 22477028 intergenic not near genes chr3L 22477126 intergenic not near genes chr3L 22477225 intergenic not near genes chr3L_13_22475001 chr3L_22475001 RAL-109_125b 2782 chr3L 22507094 22507116 chr3L 22507220 22507253 9 132 14.0 9.5 11.8 0.7 159 chr3L 22507094 intergenic not near genes chr3L 22507174 intergenic not near genes chr3L 22507253 intergenic not near genes chr3L_9_22505001 chr3L_22505001 RAL-109_125b 2783 chr3L 22507118 22507150 chr3L 22507214 22507281 16 124 6.0 8.0 7.0 2.0 163 chr3L 22507118 intergenic not near genes chr3L 22507200 intergenic not near genes chr3L 22507281 intergenic not near genes chr3L_16_22505001 chr3L_22505001 RAL-109_125b 2784 chr3L 22555727 22555800 chr3L 22563244 22563284 blood 22 7511 7.0 7.0 7.0 2.8 7557 chr3L 22555727 intergenic not near genes chr3L 22559506 intergenic not near genes chr3L 22563284 intergenic not near genes chr3L_22_22555001 chr3L_22555001 RAL-109_125b 2785 chr3L 22577588 22577599 chr3L 22582415 22582437 Doc 4 4835 17.5 8.0 12.8 0.3 4849 chr3L 22577588 intergenic not near genes chr3L 22580012 intergenic not near genes chr3L 22582437 3` UTR CG14459 - chr3L_4_22580001 chr3L_22580001 RAL-109_125b 2786 chr3L 22577603 22577640 chr3L 22582413 22582422 Doc 17 4827 8.5 8.0 8.2 1.8 4819 chr3L 22577603 intergenic not near genes chr3L 22580012 intergenic not near genes chr3L 22582422 3` UTR CG14459 - chr3L_17_22580001 chr3L_22580001 RAL-109_125b 2787 chr3L 22604698 22604721 chr3L 22604828 22604851 8 129 4.0 12.5 8.2 0.9 153 chr3L 22604698 intron CG14459 - chr3L 22604774 intron CG14459 - chr3L 22604851 intron CG14459 - chr3L_8_22600001 chr3L_22600001 RAL-109_125b 2788 chr3L 22617145 22617215 chr3L 22624647 22624712 blood 25 7497 8.0 6.0 7.0 3.1 7567 chr3L 22617145 intron CG14459 - chr3L 22620928 intron CG14459 - chr3L 22624712 intron CG14459 - chr3L_25_22620001 chr3L_22620001 RAL-109_125b 2789 chr3L 22626040 22626083 chr3L 22626180 22626216 11 134 4.0 12.5 8.2 1.2 176 chr3L 22626040 intron CG14459 - chr3L 22626128 intron CG14459 - chr3L 22626216 intron CG14459 - chr3L_11_22625001 chr3L_22625001 RAL-109_125b 2790 chr3L 22736317 22736381 chr3L 22738065 22738129 27 1747 7.0 5.5 6.2 3.8 1812 chr3L 22736317 intron CG11241 - chr3L 22737223 intron CG11241 - chr3L 22738129 intron CG11241 - chr3L_27_22735001 chr3L_22735001 RAL-109_125b 2791 chr3L 22853425 22853434 chr3L 22853560 22853571 7 137 19.5 7.0 13.2 0.5 146 chr3L 22853425 5` UTR,5` UTR CR43426 +,CG32462 - chr3L 22853498 5` UTR,5` UTR CR43426 +,CG32462 - chr3L 22853571 5` UTR CR43426 + chr3L_7_22850001 chr3L_22850001 RAL-109_125b 2792 chr3L 22853436 22853460 chr3L 22853553 22853597 13 135 13.5 5.5 9.5 1.2 161 chr3L 22853436 5` UTR,5` UTR CR43426 +,CG32462 - chr3L 22853516 5` UTR CR43426 + chr3L 22853597 5` UTR CR43426 + chr3L_13_22850001 chr3L_22850001 RAL-109_125b 2793 chr3L 22853461 22853707 chr3L 22853548 22853831 27 132 13.5 5.5 9.5 2.6 370 chr3L 22853461 5` UTR,5` UTR CR43426 +,CG32462 - chr3L 22853646 5` UTR CR43426 + chr3L 22853831 5` UTR CR43426 + chr3L_27_22850001 chr3L_22850001 RAL-109_125b 2794 chr3L 22865943 22865999 chr3L 22867124 22867145 Doc 25 1179 10.0 11.0 10.5 2.2 1202 chr3L 22865943 exon CG33170 + chr3L 22866544 intron CG33170 + chr3L 22867145 intron CG33170 + chr3L_25_22865001 chr3L_22865001 RAL-109_125b 2795 chr3L 19220633 19220637 chr3L 22908066 22908066 31 3687432 43.0 35.5 39.2 0.8 3687433 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908066 intergenic not near genes chr3L_31_21060001 chr3L_21060001 RAL-109_125b 2796 chr3L 20525228 20525229 chr3L 22908066 22908066 14 2382837 24.5 35.5 30.0 0.5 2382838 chr3L 20525228 intron CG4825 - chr3L 21716647 intergenic not near genes chr3L 22908066 intergenic not near genes chr3L_14_21715001 chr3L_21715001 RAL-109_125b 2797 chr3L 19220633 19220636 chr3L 22908067 22908067 12 3687433 42.0 35.5 38.8 0.3 3687434 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908067 intergenic not near genes chr3L_12_21060001 chr3L_21060001 RAL-109_125b 2798 chr3L 22908989 22909037 chr3L 22909119 22909159 20 134 11.0 14.0 12.5 1.5 170 chr3L 22908989 intergenic CR45661 + chr3L 22909074 intergenic CR45661 + chr3L 22909159 intergenic CR45661 + chr3L_20_22905001 chr3L_22905001 RAL-109_125b 2799 chr3L 22989823 22989882 chr3L 22996847 22996906 297 29 7022 5.5 7.0 6.2 4.0 7083 chr3L 22989823 intergenic not near genes chr3L 22993364 intergenic not near genes chr3L 22996906 intergenic not near genes chr3L_29_22990001 chr3L_22990001 RAL-109_125b 2800 chr3L 23042186 23042203 chr3L 23048989 23049006 gypsy6 7 6803 13.0 10.5 11.8 0.5 6820 chr3L 23042186 intergenic not near genes chr3L 23045596 intergenic not near genes chr3L 23049006 intergenic not near genes chr3L_7_23045001 chr3L_23045001 RAL-109_125b 2801 chr3L 23042209 23042247 chr3L 23048981 23049050 gypsy6 11 6800 5.5 9.5 7.5 1.3 6841 chr3L 23042209 intergenic not near genes chr3L 23045630 intergenic not near genes chr3L 23049050 intergenic not near genes chr3L_11_23045001 chr3L_23045001 RAL-109_125b 2802 chr3L 23088251 23088315 chr3L 23088378 23088424 24 124 4.0 6.0 5.0 4.0 173 chr3L 23088251 intergenic not near genes chr3L 23088338 intergenic not near genes chr3L 23088424 intergenic not near genes chr3L_24_23085001 chr3L_23085001 RAL-109_125b 2803 chr3L 23165880 23165908 chr3L 23173376 23173404 Quasimodo 4 7496 11.0 3.0 7.0 0.5 7524 chr3L 23165880 intergenic not near genes chr3L 23169642 intergenic not near genes chr3L 23173404 intergenic not near genes chr3L_4_23165001 chr3L_23165001 RAL-109_125b 2804 chr3L 23182771 23182798 chr3L 23182897 23182924 8 126 18.5 9.5 14.0 0.5 153 chr3L 23182771 intron CG34031 + chr3L 23182848 intron CG34031 + chr3L 23182924 intron CG34031 + chr3L_8_23180001 chr3L_23180001 RAL-109_125b 2805 chr3L 23182799 23182841 chr3L 23182895 23182967 16 119 8.5 9.5 9.0 1.6 168 chr3L 23182799 intron CG34031 + chr3L 23182883 intron CG34031 + chr3L 23182967 intron CG34031 + chr3L_16_23180001 chr3L_23180001 RAL-109_125b 2806 chr3L 23277210 23277245 chr3L 23277346 23277380 4 136 1.5 8.0 4.8 0.7 170 chr3L 23277210 intron nAChRalpha4 + chr3L 23277295 intron nAChRalpha4 + chr3L 23277380 intron nAChRalpha4 + chr3L_4_23275001 chr3L_23275001 RAL-109_125b 2807 chr3L 23285581 23285650 chr3L 23286311 23286359 19 728 7.0 6.0 6.5 2.5 778 chr3L 23285581 3` UTR nAChRalpha4 + chr3L 23285970 3` UTR nAChRalpha4 + chr3L 23286359 3` UTR nAChRalpha4 + chr3L_19_23285001 chr3L_23285001 RAL-109_125b 2808 chr3L 23288227 23288248 chr3L 23288956 23288977 INE-1 10 728 16.0 6.0 11.0 0.8 750 chr3L 23288227 intergenic not near genes chr3L 23288602 intergenic not near genes chr3L 23288977 intergenic not near genes chr3L_10_23285001 chr3L_23285001 RAL-109_125b 2809 chr3L 23288249 23288299 chr3L 23288953 23289028 INE-1 18 725 6.0 6.0 6.0 2.6 779 chr3L 23288249 intergenic not near genes chr3L 23288638 intergenic not near genes chr3L 23289028 intergenic not near genes chr3L_18_23285001 chr3L_23285001 RAL-109_125b 2810 chr3L 23450062 23450096 chr3L 23450614 23450648 12 552 13.5 10.0 11.8 0.9 586 chr3L 23450062 intergenic not near genes chr3L 23450355 intergenic not near genes chr3L 23450648 intergenic not near genes chr3L_12_23450001 chr3L_23450001 RAL-109_125b 2811 chr3L 23450101 23450124 chr3L 23450613 23450676 14 548 9.0 10.0 9.5 1.3 575 chr3L 23450101 intergenic not near genes chr3L 23450388 intergenic not near genes chr3L 23450676 intergenic not near genes chr3L_14_23450001 chr3L_23450001 RAL-109_125b 2812 chr3L 23772892 23772901 chr3L 23773028 23773037 7 136 29.5 13.5 21.5 0.3 145 chr3L 23772892 intergenic not near genes chr3L 23772964 intergenic not near genes chr3L 23773037 intergenic not near genes chr3L_7_23770001 chr3L_23770001 RAL-109_125b 2813 chr3L 23823982 23824014 chr3L 23824445 23824477 6 463 7.5 11.0 9.2 0.6 495 chr3L 23823982 intergenic not near genes chr3L 23824230 intergenic not near genes chr3L 23824477 intergenic not near genes chr3L_6_23820001 chr3L_23820001 RAL-109_125b 2814 chr3L 23875480 23875536 chr3L 23875611 23875667 16 126 10.5 9.0 9.8 1.5 187 chr3L 23875480 intron CG40470 - chr3L 23875574 intron CG40470 - chr3L 23875667 intron CG40470 - chr3L_16_23875001 chr3L_23875001 RAL-109_125b 2815 chr3L 24012370 24012410 chr3L 24020761 24020801 roo 9 8390 12.5 9.0 10.8 0.8 8431 chr3L 24012370 intergenic not near genes chr3L 24016586 intergenic not near genes chr3L 24020801 intergenic not near genes chr3L_9_24015001 chr3L_24015001 RAL-109_125b 2816 chr3L 24168775 24168818 chr3L 24176116 24176141 ZAM 14 7350 6.5 5.5 6.0 2.0 7366 chr3L 24168775 intron Snap25 + chr3L 24172458 intron Snap25 + chr3L 24176141 intron Snap25 + chr3L_14_24170001 chr3L_24170001 RAL-109_125b 2817 chr3L 24233769 24233793 chr3L 24233892 24233921 7 127 7.5 9.0 8.2 0.8 152 chr3L 24233769 intron Snap25 + chr3L 24233845 intron Snap25 + chr3L 24233921 intron Snap25 + chr3L_7_24230001 chr3L_24230001 RAL-109_125b 2818 chr3L 24791850 24791881 chr3L 24796679 24796710 Doc 10 4829 5.5 6.0 5.8 1.5 4860 chr3L 24791850 intergenic not near genes chr3L 24794280 intergenic not near genes chr3L 24796710 intergenic not near genes chr3L_10_24790001 chr3L_24790001 RAL-109_125b 2819 chr3L 18198930 18198931 chr3L 24821493 24821493 6 6622562 0.5 19.5 10.0 0.5 6622563 chr3L 18198930 intergenic not near genes chr3L 21510212 intron M6 + chr3L 24821493 intergenic not near genes chr3L_6_21510001 chr3L_21510001 RAL-109_125b 2820 chr3L 20525228 20525230 chr3L 24821493 24821493 4 4296264 24.5 19.5 22.0 0.2 4296265 chr3L 20525228 intron CG4825 - chr3L 22673360 intron CG14457 + chr3L 24821493 intergenic not near genes chr3L_4_22670001 chr3L_22670001 RAL-109_125b 2821 chr3L 25331596 25331639 chr3L 25331729 25331764 10 134 8.0 6.5 7.2 1.2 168 chr3L 25331596 intergenic not near genes chr3L 25331680 intergenic not near genes chr3L 25331764 intergenic not near genes chr3L_10_25330001 chr3L_25330001 RAL-109_125b 2822 chr3L 23289004 23289061 chr3L 25843635 25843702 21 2554632 44.0 44.5 44.2 0.5 2554698 chr3L 23289004 intergenic not near genes chr3L 24566353 intergenic not near genes chr3L 25843702 intron CG40178 - chr3L_21_24565001 chr3L_24565001 RAL-109_125b 2823 chr3L 26008726 26008732 chr3L 26008923 26008929 4 197 13.5 9.5 11.5 0.3 203 chr3L 26008726 intron CG40178 - chr3L 26008828 intron CG40178 - chr3L 26008929 intron CG40178 - chr3L_4_26005001 chr3L_26005001 RAL-109_125b 2824 chr3L 26008734 26008795 chr3L 26008920 26008982 19 195 3.5 9.5 6.5 2.5 248 chr3L 26008734 intron CG40178 - chr3L 26008858 intron CG40178 - chr3L 26008982 intron CG40178 - chr3L_19_26005001 chr3L_26005001 RAL-109_125b 2825 chr3L 27365354 27365401 chr3L 27365712 27365765 13 354 9.5 8.0 8.8 1.3 411 chr3L 27365354 intron Dbp80 + chr3L 27365560 intron Dbp80 + chr3L 27365765 intron Dbp80 + chr3L_13_27365001 chr3L_27365001 RAL-109_125b 2826 chr3L 27390672 27390681 chr3L 27390797 27390800 4 126 39.5 32.5 36.0 0.1 128 chr3L 27390672 intron Dbp80 + chr3L 27390736 intron Dbp80 + chr3L 27390800 intron Dbp80 + chr3L_4_27390001 chr3L_27390001 RAL-109_125b 2827 chr3L 27390684 27390707 chr3L 27390768 27390836 7 120 39.5 38.0 38.8 0.2 152 chr3L 27390684 intron Dbp80 + chr3L 27390760 intron Dbp80 + chr3L 27390836 intron Dbp80 + chr3L_7_27390001 chr3L_27390001 RAL-109_125b 2828 chr3R 1867051 1867073 chr3R 1954883 1954905 Doc3-element 6 87831 19.5 6.5 13.0 0.4 87854 chr3R 1867051 intron CG42623 + chr3R 1910978 intron CG42623 + chr3R 1954905 intergenic not near genes chr3R_6_1910001 chr3R_1910001 RAL-109_125b 2829 chr3R 2446810 2446854 chr3R 2449009 2449053 1360 6 2200 63.5 52.5 58.0 0.1 2243 chr3R 2446810 intergenic not near genes chr3R 2447932 intergenic not near genes chr3R 2449053 intergenic not near genes chr3R_6_2445001 chr3R_2445001 RAL-109_125b 2830 chr3R 1511854 1511859 chr3R 2516723 2516754 297 5 1004874 13.5 21.5 17.5 0.3 1004900 chr3R 1511854 intergenic not near genes chr3R 2014304 intergenic not near genes chr3R 2516754 intergenic not near genes chr3R_5_2010001 chr3R_2010001 RAL-109_125b 2831 chr3R 2534098 2534157 chr3R 2541717 2541745 16 7609 27.0 25.0 26.0 0.6 7647 chr3R 2534098 intergenic not near genes chr3R 2537922 intergenic not near genes chr3R 2541745 intergenic not near genes chr3R_16_2535001 chr3R_2535001 RAL-109_125b 2832 chr3R 2556882 2556957 chr3R 2557572 2557640 14 686 37.0 37.0 37.0 0.4 758 chr3R 2556882 intron CG41056 - chr3R 2557261 intron CG41056 - chr3R 2557640 intron CG41056 - chr3R_14_2555001 chr3R_2555001 RAL-109_125b 2833 chr3R 4063764 4063803 chr3R 4069089 4069093 10 5322 7.5 21.5 14.5 0.6 5329 chr3R 4063764 intergenic not near genes chr3R 4066428 intergenic not near genes chr3R 4069093 intergenic not near genes chr3R_10_4065001 chr3R_4065001 RAL-109_125b 2834 chr3R 4132856 4132929 chr3R 4133060 4133133 20 204 2.5 3.0 2.8 5.3 277 chr3R 4132856 intron Gfat1 + chr3R 4132994 intron Gfat1 + chr3R 4133133 intron Gfat1 + chr3R_20_4130001 chr3R_4130001 RAL-109_125b 2835 chr3R 4161492 4161571 chr3R 4161617 4161691 23 121 3.0 6.0 4.5 4.2 199 chr3R 4161492 3` UTR CG40198 - chr3R 4161592 3` UTR CG40198 - chr3R 4161691 exon CG40198 - chr3R_23_4160001 chr3R_4160001 RAL-109_125b 2836 chr3R 4206026 4206092 chr3R 4211651 4211675 mdg3 18 5622 8.5 3.5 6.0 2.6 5649 chr3R 4206026 intron CG14636 - chr3R 4208850 intron CG14636 - chr3R 4211675 intron CG14636 - chr3R_18_4205001 chr3R_4205001 RAL-109_125b 2837 chr3R 4366712 4366782 chr3R 4375145 4375215 roo 32 8432 12.5 10.0 11.2 2.6 8503 chr3R 4366712 3` UTR CG1090 + chr3R 4370964 intergenic not near genes chr3R 4375215 5` UTR CR44922 + chr3R_32_4370001 chr3R_4370001 RAL-109_125b 2838 chr3R 4408371 4408391 chr3R 4412725 4412745 Juan 8 4353 16.5 0.0 8.2 0.9 4374 chr3R 4408371 intron CG32944 - chr3R 4410558 intron CG32944 - chr3R 4412745 intron CG32944 - chr3R_8_4410001 chr3R_4410001 RAL-109_125b 2839 chr3R 4609509 4609570 chr3R 4610723 4610784 1360 21 1212 7.0 11.5 9.2 2.1 1275 chr3R 4609509 intergenic not near genes chr3R 4610146 intergenic not near genes chr3R 4610784 intergenic not near genes chr3R_21_4610001 chr3R_4610001 RAL-109_125b 2840 chr3R 4661444 4661478 chr3R 4661565 4661571 6 118 9.0 1.0 5.0 1.0 127 chr3R 4661444 intron CG43427 + chr3R 4661508 intron CG43427 + chr3R 4661571 intron CG43427 + chr3R_6_4660001 chr3R_4660001 RAL-109_125b 2841 chr3R 4683130 4683166 chr3R 4684938 4684963 S-element 11 1804 14.5 9.0 11.8 0.9 1833 chr3R 4683130 intron CG43427 + chr3R 4684046 intron CG43427 + chr3R 4684963 intron CG43427 + chr3R_11_4680001 chr3R_4680001 RAL-109_125b 2842 chr3R 4683167 4683206 chr3R 4684937 4684997 S-element 12 1799 6.0 8.5 7.2 1.5 1830 chr3R 4683167 intron CG43427 + chr3R 4684082 intron CG43427 + chr3R 4684997 intron CG43427 + chr3R_12_4680001 chr3R_4680001 RAL-109_125b 2843 chr3R 4753203 4753256 chr3R 4757556 4757602 F-element 18 4349 13.5 14.5 14.0 1.2 4399 chr3R 4753203 intron,intron atms +,CG44098 - chr3R 4755402 intron,intron atms +,CG44098 - chr3R 4757602 intron,exon atms +,CG44098 - chr3R_18_4755001 chr3R_4755001 RAL-109_125b 2844 chr3R 4769121 4769137 chr3R 4769249 4769265 7 127 13.5 9.0 11.2 0.6 144 chr3R 4769121 intron,intron atms +,CG44098 - chr3R 4769193 intron,intron atms +,CG44098 - chr3R 4769265 intron,intron atms +,CG44098 - chr3R_7_4765001 chr3R_4765001 RAL-109_125b 2845 chr3R 4769151 4769187 chr3R 4769239 4769315 14 117 8.0 7.5 7.8 1.6 164 chr3R 4769151 intron,intron atms +,CG44098 - chr3R 4769233 intron,intron atms +,CG44098 - chr3R 4769315 intron,intron atms +,CG44098 - chr3R_14_4765001 chr3R_4765001 RAL-109_125b 2846 chr3R 4784529 4784570 chr3R 4791382 4791393 7 6841 45.5 49.0 47.2 0.1 6864 chr3R 4784529 exon CG17387 - chr3R 4787961 exon ctrip - chr3R 4791393 exon ctrip - chr3R_7_4785001 chr3R_4785001 RAL-109_125b 2847 chr3R 4784515 4784569 chr3R 4791395 4791419 10 6854 45.5 45.5 45.5 0.2 6904 chr3R 4784515 exon CG17387 - chr3R 4787967 exon ctrip - chr3R 4791419 exon ctrip - chr3R_10_4785001 chr3R_4785001 RAL-109_125b 2848 chr3R 4802095 4802102 chr3R 4802288 4802319 4 210 18.0 8.0 13.0 0.3 224 chr3R 4802095 intron ctrip - chr3R 4802207 intron ctrip - chr3R 4802319 intron ctrip - chr3R_4_4800001 chr3R_4800001 RAL-109_125b 2849 chr3R 4887435 4887505 chr3R 4894862 4894932 rover 14 7421 5.5 7.0 6.2 1.9 7497 chr3R 4887435 intergenic not near genes chr3R 4891184 intergenic not near genes chr3R 4894932 intergenic not near genes chr3R_14_4890001 chr3R_4890001 RAL-109_125b 2850 chr3R 4922294 4922363 chr3R 4922423 4922492 22 127 6.0 5.5 5.8 3.2 198 chr3R 4922294 intron Cdep + chr3R 4922393 intron Cdep + chr3R 4922492 intron Cdep + chr3R_22_4920001 chr3R_4920001 RAL-109_125b 2851 chr3R 4948336 4948392 chr3R 4949008 4949064 27 671 33.5 17.0 25.2 1.0 728 chr3R 4948336 intergenic snRNA:U1:82Eb -,UbcD6 - chr3R 4948700 intergenic UbcD6 - chr3R 4949064 3` UTR UbcD6 - chr3R_27_4945001 chr3R_4945001 RAL-109_125b 2852 chr3R 4965964 4966031 chr3R 4966106 4966173 30 139 0.5 6.5 3.5 6.7 209 chr3R 4965964 intron CG1124 + chr3R 4966068 intron CG1124 + chr3R 4966173 intron CG1124 + chr3R_30_4965001 chr3R_4965001 RAL-109_125b 2853 chr3R 4981388 4981439 chr3R 4981489 4981562 15 103 7.5 6.5 7.0 1.9 174 chr3R 4981388 intergenic not near genes chr3R 4981475 intergenic not near genes chr3R 4981562 intergenic CG14662 - chr3R_15_4980001 chr3R_4980001 RAL-109_125b 2854 chr3R 5045799 5045864 chr3R 5052951 5053016 HMS-Beagle 26 7151 12.0 10.0 11.0 2.2 7217 chr3R 5045799 3` UTR CR43635 - chr3R 5049408 intergenic not near genes chr3R 5053016 intergenic CR45588 - chr3R_26_5045001 chr3R_5045001 RAL-109_125b 2855 chr3R 5067936 5068002 chr3R 5073503 5073569 mdg3 35 5565 10.5 9.5 10.0 3.2 5633 chr3R 5067936 intergenic not near genes chr3R 5070752 intergenic not near genes chr3R 5073569 intergenic not near genes chr3R_35_5070001 chr3R_5070001 RAL-109_125b 2856 chr3R 5205097 5205132 chr3R 5205239 5205274 14 140 12.5 8.5 10.5 1.2 177 chr3R 5205097 intron cno - chr3R 5205186 intron cno - chr3R 5205274 intron cno - chr3R_14_5205001 chr3R_5205001 RAL-109_125b 2857 chr3R 5236146 5236208 chr3R 5236291 5236353 24 142 8.5 5.0 6.8 3.1 207 chr3R 5236146 3` UTR,3` UTR Mms19 +,rtp - chr3R 5236250 3` UTR,3` UTR Mms19 +,rtp - chr3R 5236353 3` UTR rtp - chr3R_24_5235001 chr3R_5235001 RAL-109_125b 2858 chr3R 5278056 5278110 chr3R 5278174 5278241 21 126 11.5 9.0 10.2 1.9 185 chr3R 5278056 intron mtd - chr3R 5278148 intron mtd - chr3R 5278241 intron mtd - chr3R_21_5275001 chr3R_5275001 RAL-109_125b 2859 chr3R 5282945 5282986 chr3R 5283070 5283083 11 117 12.5 10.5 11.5 0.9 138 chr3R 5282945 intron mtd - chr3R 5283014 intron mtd - chr3R 5283083 intron mtd - chr3R_11_5280001 chr3R_5280001 RAL-109_125b 2860 chr3R 5338356 5338417 chr3R 5343583 5343600 Rt1c 33 5221 14.0 14.0 14.0 2.2 5244 chr3R 5338356 intron mtd - chr3R 5340978 intron mtd - chr3R 5343600 intron mtd - chr3R_33_5340001 chr3R_5340001 RAL-109_125b 2861 chr3R 5365290 5365345 chr3R 5367008 5367063 NOF 27 1717 9.5 7.5 8.5 2.8 1773 chr3R 5365290 intron Cerk - chr3R 5366176 intron Cerk - chr3R 5367063 intron Cerk - chr3R_27_5365001 chr3R_5365001 RAL-109_125b 2862 chr3R 5367116 5367171 chr3R 5367292 5367337 21 173 7.5 15.0 11.2 1.7 221 chr3R 5367116 intron Cerk - chr3R 5367226 intron Cerk - chr3R 5367337 intron Cerk - chr3R_21_5365001 chr3R_5365001 RAL-109_125b 2863 chr3R 5385937 5385994 chr3R 5386145 5386214 19 215 7.5 9.0 8.2 2.1 277 chr3R 5385937 intron kkv - chr3R 5386076 intron kkv - chr3R 5386214 intron kkv - chr3R_19_5385001 chr3R_5385001 RAL-109_125b 2864 chr3R 5438739 5438811 chr3R 5438958 5439030 30 218 5.0 7.0 6.0 4.3 291 chr3R 5438739 intron CG14669 + chr3R 5438884 intron CG14669 + chr3R 5439030 intron CG14669 + chr3R_30_5435001 chr3R_5435001 RAL-109_125b 2865 chr3R 5445920 5445986 chr3R 5452430 5452496 Burdock 26 6510 7.5 3.5 5.5 4.0 6576 chr3R 5445920 intron CG14669 + chr3R 5449208 intron CG14669 + chr3R 5452496 intron CG14669 + chr3R_26_5445001 chr3R_5445001 RAL-109_125b 2866 chr3R 5627108 5627131 chr3R 5627568 5627592 15 461 19.0 9.0 14.0 1.0 484 chr3R 5627108 intergenic not near genes chr3R 5627350 intergenic not near genes chr3R 5627592 intergenic CG31551 + chr3R_15_5625001 chr3R_5625001 RAL-109_125b 2867 chr3R 5627135 5627172 chr3R 5627560 5627578 13 448 7.0 6.5 6.8 1.7 443 chr3R 5627135 intergenic not near genes chr3R 5627356 intergenic CG31551 + chr3R 5627578 intergenic CG31551 + chr3R_13_5625001 chr3R_5625001 RAL-109_125b 2868 chr3R 5696129 5696140 chr3R 5696275 5696286 4 146 3.0 9.5 6.2 0.6 157 chr3R 5696129 intron plx + chr3R 5696208 intron plx + chr3R 5696286 intron plx + chr3R_4_5695001 chr3R_5695001 RAL-109_125b 2869 chr3R 5726049 5726088 chr3R 5726261 5726300 21 212 9.0 8.0 8.5 2.2 251 chr3R 5726049 intergenic not near genes chr3R 5726174 intergenic not near genes chr3R 5726300 intergenic not near genes chr3R_21_5725001 chr3R_5725001 RAL-109_125b 2870 chr3R 5726096 5726117 chr3R 5726260 5726329 7 205 5.0 8.0 6.5 0.9 233 chr3R 5726096 intergenic not near genes chr3R 5726212 intergenic not near genes chr3R 5726329 intergenic not near genes chr3R_7_5725001 chr3R_5725001 RAL-109_125b 2871 chr3R 5745991 5746038 chr3R 5746267 5746329 pogo 16 289 3.5 8.0 5.8 2.4 338 chr3R 5745991 3` UTR Madm + chr3R 5746160 3` UTR Madm + chr3R 5746329 3` UTR Madm + chr3R_16_5745001 chr3R_5745001 RAL-109_125b 2872 chr3R 5746975 5747037 chr3R 5753216 5753278 diver 19 6240 9.0 9.0 9.0 1.9 6303 chr3R 5746975 intergenic Madm + chr3R 5750126 intergenic not near genes chr3R 5753278 intergenic CG2091 - chr3R_19_5750001 chr3R_5750001 RAL-109_125b 2873 chr3R 5772327 5772405 chr3R 5772535 5772597 35 207 10.0 7.0 8.5 3.7 270 chr3R 5772327 intron CG2082 - chr3R 5772462 intron CG2082 - chr3R 5772597 intron CG2082 - chr3R_35_5770001 chr3R_5770001 RAL-109_125b 2874 chr3R 5809081 5809141 chr3R 5809355 5809392 pogo 19 281 5.0 4.5 4.8 3.3 311 chr3R 5809081 3` UTR CG11000 + chr3R 5809236 3` UTR CG11000 + chr3R 5809392 3` UTR CG11000 + chr3R_19_5805001 chr3R_5805001 RAL-109_125b 2875 chr3R 5822343 5822353 chr3R 5823560 5823570 1360 6 1217 15.0 8.0 11.5 0.5 1227 chr3R 5822343 3` UTR CG2023 - chr3R 5822956 3` UTR CG2023 - chr3R 5823570 3` UTR CG2023 - chr3R_6_5820001 chr3R_5820001 RAL-109_125b 2876 chr3R 5822354 5822402 chr3R 5823559 5823619 1360 19 1216 9.0 8.0 8.5 2.0 1265 chr3R 5822354 3` UTR CG2023 - chr3R 5822986 3` UTR CG2023 - chr3R 5823619 3` UTR CG2023 - chr3R_19_5820001 chr3R_5820001 RAL-109_125b 2877 chr3R 5836164 5836170 chr3R 5836318 5836324 6 154 21.5 23.5 22.5 0.3 160 chr3R 5836164 exon,3` UTR CG1208 +,CR45192 - chr3R 5836244 intron CG1208 + chr3R 5836324 intron CG1208 + chr3R_6_5835001 chr3R_5835001 RAL-109_125b 2878 chr3R 5861530 5861586 chr3R 5861659 5861715 16 128 5.0 11.5 8.2 1.7 185 chr3R 5861530 intron CG2017 - chr3R 5861622 intron CG2017 - chr3R 5861715 intron CG2017 - chr3R_16_5860001 chr3R_5860001 RAL-109_125b 2879 chr3R 5927527 5927544 chr3R 5927807 5927822 pogo 6 280 12.5 10.0 11.2 0.5 295 chr3R 5927527 intron CG34113 - chr3R 5927674 intron CG34113 - chr3R 5927822 intron CG34113 - chr3R_6_5925001 chr3R_5925001 RAL-109_125b 2880 chr3R 5927551 5927577 chr3R 5927801 5927867 pogo 14 272 10.0 8.0 9.0 1.4 316 chr3R 5927551 intron CG34113 - chr3R 5927709 intron CG34113 - chr3R 5927867 intron CG34113 - chr3R_14_5925001 chr3R_5925001 RAL-109_125b 2881 chr3R 5943355 5943415 chr3R 5943483 5943544 23 122 4.5 4.0 4.2 4.4 189 chr3R 5943355 intron CG34113 - chr3R 5943450 intron CG34113 - chr3R 5943544 intron CG34113 - chr3R_23_5940001 chr3R_5940001 RAL-109_125b 2882 chr3R 5947923 5947943 chr3R 5948068 5948083 7 143 14.0 6.0 10.0 0.6 160 chr3R 5947923 intron CG34113 - chr3R 5948003 intron CG34113 - chr3R 5948083 intron CG34113 - chr3R_7_5945001 chr3R_5945001 RAL-109_125b 2883 chr3R 5947951 5947995 chr3R 5948065 5948085 19 134 5.5 5.5 5.5 2.9 134 chr3R 5947951 intron CG34113 - chr3R 5948018 intron CG34113 - chr3R 5948085 intron CG34113 - chr3R_19_5945001 chr3R_5945001 RAL-109_125b 2884 chr3R 5989285 5989359 chr3R 5989418 5989462 17 121 4.5 5.0 4.8 2.9 177 chr3R 5989285 5` UTR CR44927 + chr3R 5989374 5` UTR CR44927 + chr3R 5989462 5` UTR CR44927 + chr3R_17_5985001 chr3R_5985001 RAL-109_125b 2885 chr3R 6015926 6015951 chr3R 6024449 6024482 Tirant 6 8525 16.0 10.0 13.0 0.4 8556 chr3R 6015926 intergenic not near genes chr3R 6020204 intergenic not near genes chr3R 6024482 intergenic not near genes chr3R_6_6020001 chr3R_6020001 RAL-109_125b 2886 chr3R 6015954 6015994 chr3R 6024441 6024499 Tirant 16 8514 7.0 8.5 7.8 1.8 8545 chr3R 6015954 intergenic not near genes chr3R 6020226 intergenic not near genes chr3R 6024499 intergenic not near genes chr3R_16_6020001 chr3R_6020001 RAL-109_125b 2887 chr3R 6029914 6029981 chr3R 6030166 6030232 11 246 3.0 5.0 4.0 2.2 318 chr3R 6029914 intergenic not near genes chr3R 6030073 intergenic not near genes chr3R 6030232 intergenic not near genes chr3R_11_6030001 chr3R_6030001 RAL-109_125b 2888 chr3R 6117391 6117437 chr3R 6117531 6117603 23 159 6.0 5.0 5.5 3.5 212 chr3R 6117391 intergenic not near genes chr3R 6117497 intergenic not near genes chr3R 6117603 intergenic not near genes chr3R_23_6115001 chr3R_6115001 RAL-109_125b 2889 chr3R 6121145 6121170 chr3R 6121369 6121438 BS 6 261 1.5 3.5 2.5 1.7 293 chr3R 6121145 intergenic not near genes chr3R 6121292 intergenic not near genes chr3R 6121438 intergenic not near genes chr3R_6_6120001 chr3R_6120001 RAL-109_125b 2890 chr3R 6158466 6158505 chr3R 6167099 6167128 Tirant 8 8622 18.0 9.5 13.8 0.5 8662 chr3R 6158466 intergenic not near genes chr3R 6162797 intergenic not near genes chr3R 6167128 intergenic CG1077 + chr3R_8_6160001 chr3R_6160001 RAL-109_125b 2891 chr3R 6158508 6158537 chr3R 6167091 6167135 Tirant 21 8616 11.5 5.5 8.5 2.2 8627 chr3R 6158508 intergenic not near genes chr3R 6162822 intergenic not near genes chr3R 6167135 intergenic CG1077 + chr3R_21_6160001 chr3R_6160001 RAL-109_125b 2892 chr3R 6206262 6206305 chr3R 6206507 6206572 BS 20 257 10.0 7.0 8.5 2.1 310 chr3R 6206262 exon Osi24 + chr3R 6206417 intron Osi24 + chr3R 6206572 intron Osi24 + chr3R_20_6205001 chr3R_6205001 RAL-109_125b 2893 chr3R 6241288 6241312 chr3R 6241415 6241439 5 127 10.5 6.0 8.2 0.5 151 chr3R 6241288 intergenic not near genes chr3R 6241364 intergenic not near genes chr3R 6241439 intergenic not near genes chr3R_5_6240001 chr3R_6240001 RAL-109_125b 2894 chr3R 6283262 6283329 chr3R 6283399 6283440 17 135 5.5 4.5 5.0 2.8 178 chr3R 6283262 intergenic not near genes chr3R 6283351 intergenic not near genes chr3R 6283440 intergenic not near genes chr3R_17_6280001 chr3R_6280001 RAL-109_125b 2895 chr3R 6286895 6286966 chr3R 6290065 6290136 17 3170 44.5 34.0 39.2 0.4 3241 chr3R 6286895 intergenic not near genes chr3R 6288516 intron CG15594 + chr3R 6290136 intergenic CG15594 + chr3R_17_6285001 chr3R_6285001 RAL-109_125b 2896 chr3R 6428759 6428825 chr3R 6428911 6428977 16 151 9.5 9.5 9.5 1.5 218 chr3R 6428759 intron gpp + chr3R 6428868 intron gpp + chr3R 6428977 intron gpp + chr3R_16_6425001 chr3R_6425001 RAL-109_125b 2897 chr3R 6494796 6494867 chr3R 6495040 6495111 28 244 5.0 6.0 5.5 4.3 315 chr3R 6494796 3` UTR CG15186 + chr3R 6494954 3` UTR CG15186 + chr3R 6495111 intergenic CG15186 + chr3R_28_6490001 chr3R_6490001 RAL-109_125b 2898 chr3R 6509983 6510053 chr3R 6515112 6515132 jockey 16 5128 4.5 6.5 5.5 2.5 5149 chr3R 6509983 intergenic not near genes chr3R 6512558 intergenic not near genes chr3R 6515132 intergenic not near genes chr3R_16_6510001 chr3R_6510001 RAL-109_125b 2899 chr3R 6523273 6523351 chr3R 6523699 6523744 19 423 4.5 6.0 5.2 3.1 471 chr3R 6523273 intergenic not near genes chr3R 6523508 intergenic not near genes chr3R 6523744 intergenic not near genes chr3R_19_6520001 chr3R_6520001 RAL-109_125b 2900 chr3R 6526834 6526868 chr3R 6526987 6527021 8 153 6.0 8.0 7.0 1.0 187 chr3R 6526834 intergenic not near genes chr3R 6526928 intergenic not near genes chr3R 6527021 intergenic CG15185 + chr3R_8_6525001 chr3R_6525001 RAL-109_125b 2901 chr3R 6717673 6717702 chr3R 6717827 6717884 4 162 4.0 8.0 6.0 0.6 211 chr3R 6717673 intron pb - chr3R 6717778 intron pb - chr3R 6717884 intron pb - chr3R_4_6715001 chr3R_6715001 RAL-109_125b 2902 chr3R 6737481 6737529 chr3R 6739290 6739342 Doc 19 1821 5.5 10.0 7.8 2.2 1861 chr3R 6737481 intron pb - chr3R 6738412 intron pb - chr3R 6739342 intron pb - chr3R_19_6735001 chr3R_6735001 RAL-109_125b 2903 chr3R 6773511 6773578 chr3R 6773649 6773699 18 128 5.5 6.0 5.8 2.6 188 chr3R 6773511 intron CR42721 + chr3R 6773605 intron CR42721 + chr3R 6773699 intron CR42721 + chr3R_18_6770001 chr3R_6770001 RAL-109_125b 2904 chr3R 6780401 6780483 chr3R 6780534 6780616 20 131 7.0 6.0 6.5 2.7 215 chr3R 6780401 intergenic not near genes chr3R 6780508 intergenic not near genes chr3R 6780616 intergenic not near genes chr3R_20_6780001 chr3R_6780001 RAL-109_125b 2905 chr3R 6782399 6782463 chr3R 6782523 6782592 29 126 12.0 7.5 9.8 2.7 193 chr3R 6782399 intergenic not near genes chr3R 6782496 intergenic not near genes chr3R 6782592 intergenic not near genes chr3R_29_6780001 chr3R_6780001 RAL-109_125b 2906 chr3R 6803696 6803748 chr3R 6803831 6803874 11 132 0.0 5.5 2.8 2.9 178 chr3R 6803696 intergenic not near genes chr3R 6803785 intergenic not near genes chr3R 6803874 intergenic not near genes chr3R_11_6800001 chr3R_6800001 RAL-109_125b 2907 chr3R 6807217 6807284 chr3R 6807349 6807416 30 132 7.0 4.0 5.5 4.6 199 chr3R 6807217 intergenic not near genes chr3R 6807316 intergenic not near genes chr3R 6807416 intergenic not near genes chr3R_30_6805001 chr3R_6805001 RAL-109_125b 2908 chr3R 6827975 6828039 chr3R 6828101 6828165 21 124 5.5 5.5 5.5 3.2 190 chr3R 6827975 intron Scr - chr3R 6828070 intron Scr - chr3R 6828165 intron Scr - chr3R_21_6825001 chr3R_6825001 RAL-109_125b 2909 chr3R 6856333 6856391 chr3R 6856500 6856558 18 167 6.5 5.5 6.0 2.6 225 chr3R 6856333 intergenic not near genes chr3R 6856446 intergenic not near genes chr3R 6856558 intergenic not near genes chr3R_18_6855001 chr3R_6855001 RAL-109_125b 2910 chr3R 6862173 6862243 chr3R 6862310 6862356 19 134 5.5 8.0 6.8 2.4 183 chr3R 6862173 intergenic not near genes chr3R 6862264 intergenic not near genes chr3R 6862356 intergenic not near genes chr3R_19_6860001 chr3R_6860001 RAL-109_125b 2911 chr3R 6891240 6891245 chr3R 6891366 6891371 4 126 1.5 10.5 6.0 0.6 131 chr3R 6891240 intergenic not near genes chr3R 6891306 intergenic not near genes chr3R 6891371 intergenic not near genes chr3R_4_6890001 chr3R_6890001 RAL-109_125b 2912 chr3R 6891246 6891266 chr3R 6891337 6891352 5 108 2.5 7.5 5.0 0.8 106 chr3R 6891246 intergenic not near genes chr3R 6891299 intergenic not near genes chr3R 6891352 intergenic not near genes chr3R_5_6890001 chr3R_6890001 RAL-109_125b 2913 chr3R 6900697 6900723 chr3R 6900824 6900850 11 127 14.0 10.5 12.2 0.8 153 chr3R 6900697 intron Antp - chr3R 6900774 intron Antp - chr3R 6900850 intron Antp - chr3R_11_6900001 chr3R_6900001 RAL-109_125b 2914 chr3R 6912051 6912127 chr3R 6912212 6912288 20 161 5.5 1.5 3.5 4.4 237 chr3R 6912051 intron Antp - chr3R 6912170 intron Antp - chr3R 6912288 intron Antp - chr3R_20_6910001 chr3R_6910001 RAL-109_125b 2915 chr3R 6923542 6923554 chr3R 6923679 6923691 6 136 12.5 6.5 9.5 0.6 149 chr3R 6923542 intron Antp - chr3R 6923616 intron Antp - chr3R 6923691 intron Antp - chr3R_6_6920001 chr3R_6920001 RAL-109_125b 2916 chr3R 6923557 6923594 chr3R 6923678 6923730 9 133 6.0 6.5 6.2 1.2 173 chr3R 6923557 intron Antp - chr3R 6923644 intron Antp - chr3R 6923730 intron Antp - chr3R_9_6920001 chr3R_6920001 RAL-109_125b 2917 chr3R 6978846 6978908 chr3R 6978970 6979043 23 131 7.0 6.5 6.8 2.9 197 chr3R 6978846 intron Antp - chr3R 6978944 intron Antp - chr3R 6979043 intron Antp - chr3R_23_6975001 chr3R_6975001 RAL-109_125b 2918 chr3R 7015948 7015973 chr3R 7016074 7016085 6 123 8.5 0.0 4.2 1.2 137 chr3R 7015948 intergenic not near genes chr3R 7016016 intergenic not near genes chr3R 7016085 intergenic not near genes chr3R_6_7015001 chr3R_7015001 RAL-109_125b 2919 chr3R 7092748 7092810 chr3R 7093357 7093424 22 609 11.0 13.0 12.0 1.7 676 chr3R 7092748 3` UTR CR43685 - chr3R 7093086 intron CR43685 - chr3R 7093424 3` UTR CR43685 - chr3R_22_7090001 chr3R_7090001 RAL-109_125b 2920 chr3R 7103234 7103306 chr3R 7103360 7103432 17 116 12.5 10.5 11.5 1.4 198 chr3R 7103234 intron Alh - chr3R 7103333 intron Alh - chr3R 7103432 intron Alh - chr3R_17_7100001 chr3R_7100001 RAL-109_125b 2921 chr3R 7105278 7105345 chr3R 7105411 7105427 28 130 5.5 6.5 6.0 4.0 149 chr3R 7105278 intron Alh - chr3R 7105352 intron Alh - chr3R 7105427 intron Alh - chr3R_28_7105001 chr3R_7105001 RAL-109_125b 2922 chr3R 7126472 7126529 chr3R 7126607 7126674 25 144 9.0 8.0 8.5 2.6 202 chr3R 7126472 3` UTR,3` UTR CG10098 +,CG10068 - chr3R 7126573 3` UTR CG10068 - chr3R 7126674 3` UTR CG10068 - chr3R_25_7125001 chr3R_7125001 RAL-109_125b 2923 chr3R 7132798 7132866 chr3R 7132939 7133007 28 139 3.5 10.0 6.8 3.6 209 chr3R 7132798 intergenic CG31493 + chr3R 7132902 intergenic CG31493 + chr3R 7133007 intergenic CG31493 + chr3R_28_7130001 chr3R_7130001 RAL-109_125b 2924 chr3R 7173635 7173697 chr3R 7173765 7173827 19 129 8.5 7.0 7.8 2.2 192 chr3R 7173635 intron sas + chr3R 7173731 intron sas + chr3R 7173827 intron sas + chr3R_19_7170001 chr3R_7170001 RAL-109_125b 2925 chr3R 7217437 7217477 chr3R 7217682 7217738 23 268 9.5 8.0 8.8 2.3 301 chr3R 7217437 intergenic CG14605 -,CG14606 - chr3R 7217588 intergenic CG14605 - chr3R 7217738 exon CG14605 - chr3R_23_7215001 chr3R_7215001 RAL-109_125b 2926 chr3R 7269877 7269911 chr3R 7270016 7270045 10 142 8.0 4.5 6.2 1.4 168 chr3R 7269877 3` UTR Syt4 + chr3R 7269961 3` UTR Syt4 + chr3R 7270045 3` UTR Syt4 + chr3R_10_7265001 chr3R_7265001 RAL-109_125b 2927 chr3R 7447945 7448010 chr3R 7448073 7448138 24 128 9.5 10.0 9.8 2.2 193 chr3R 7447945 intergenic not near genes chr3R 7448042 intergenic not near genes chr3R 7448138 intergenic not near genes chr3R_24_7445001 chr3R_7445001 RAL-109_125b 2928 chr3R 7499700 7499763 chr3R 7499828 7499891 26 126 7.5 9.5 8.5 2.7 191 chr3R 7499700 intron alpha-Est9 - chr3R 7499796 intron alpha-Est9 - chr3R 7499891 intron alpha-Est9 - chr3R_26_7495001 chr3R_7495001 RAL-109_125b 2929 chr3R 7621482 7621559 chr3R 7621622 7621698 16 135 2.0 5.0 3.5 3.6 216 chr3R 7621482 intron CG34127 - chr3R 7621590 intron CG34127 - chr3R 7621698 intron CG34127 - chr3R_16_7620001 chr3R_7620001 RAL-109_125b 2930 chr3R 7639743 7639813 chr3R 7639931 7640004 15 186 5.0 5.5 5.2 2.4 261 chr3R 7639743 intergenic CG34127 - chr3R 7639874 intergenic CG34127 - chr3R 7640004 intergenic not near genes chr3R_15_7635001 chr3R_7635001 RAL-109_125b 2931 chr3R 7660747 7660760 chr3R 7660878 7660898 8 139 15.5 8.0 11.8 0.6 151 chr3R 7660747 intron Nlg1 + chr3R 7660822 intron Nlg1 + chr3R 7660898 intron Nlg1 + chr3R_8_7660001 chr3R_7660001 RAL-109_125b 2932 chr3R 7660764 7660811 chr3R 7660875 7660877 21 132 8.0 7.0 7.5 2.5 113 chr3R 7660764 intron Nlg1 + chr3R 7660820 intron Nlg1 + chr3R 7660877 intron Nlg1 + chr3R_21_7660001 chr3R_7660001 RAL-109_125b 2933 chr3R 7694534 7694602 chr3R 7713645 7713713 invader3 22 19108 5.5 6.0 5.8 3.2 19179 chr3R 7694534 3` UTR Nlg1 + chr3R 7704124 intergenic not near genes chr3R 7713713 intergenic not near genes chr3R_22_7700001 chr3R_7700001 RAL-109_125b 2934 chr3R 7729427 7729490 chr3R 7737415 7737478 Stalker2 20 7988 8.5 7.0 7.8 2.3 8051 chr3R 7729427 intergenic not near genes chr3R 7733452 intergenic not near genes chr3R 7737478 intergenic not near genes chr3R_20_7730001 chr3R_7730001 RAL-109_125b 2935 chr3R 7809907 7809924 chr3R 7809998 7810051 13 115 11.0 5.5 8.2 1.4 144 chr3R 7809907 5` UTR CG2993 - chr3R 7809979 5` UTR CG2993 - chr3R 7810051 intergenic CG2993 -,CG31472 + chr3R_13_7805001 chr3R_7805001 RAL-109_125b 2936 chr3R 7809928 7809948 chr3R 7809997 7810061 10 112 5.5 5.5 5.5 1.5 133 chr3R 7809928 5` UTR CG2993 - chr3R 7809994 5` UTR CG2993 - chr3R 7810061 intergenic CG2993 -,CG31472 + chr3R_10_7805001 chr3R_7805001 RAL-109_125b 2937 chr3R 7773344 7773344 chr3R 7890531 7890533 7 117189 27.5 33.5 30.5 0.2 117189 chr3R 7773344 intergenic not near genes chr3R 7831938 intron CG34384 + chr3R 7890533 intron mRpS9 - chr3R_7_7830001 chr3R_7830001 RAL-109_125b 2938 chr3R 7973290 7973327 chr3R 7974402 7974439 1360 17 1112 13.0 12.5 12.8 1.2 1149 chr3R 7973290 intergenic not near genes chr3R 7973864 intergenic not near genes chr3R 7974439 3` UTR CD98hc - chr3R_17_7970001 chr3R_7970001 RAL-109_125b 2939 chr3R 8040613 8040674 chr3R 8040741 8040808 9 133 7.0 4.5 5.8 1.3 195 chr3R 8040613 intergenic not near genes chr3R 8040710 intergenic not near genes chr3R 8040808 intergenic CG43060 + chr3R_9_8040001 chr3R_8040001 RAL-109_125b 2940 chr3R 8090221 8090299 chr3R 8090448 8090510 32 223 8.5 2.5 5.5 4.9 289 chr3R 8090221 5` UTR CR44330 + chr3R 8090366 intergenic CR44330 + chr3R 8090510 intergenic CR44330 + chr3R_32_8090001 chr3R_8090001 RAL-109_125b 2941 chr3R 8090518 8090562 chr3R 8094045 8094089 297 20 3524 5.0 16.0 10.5 1.7 3571 chr3R 8090518 intergenic CR44330 + chr3R 8092304 intergenic not near genes chr3R 8094089 intergenic CG7900 + chr3R_20_8090001 chr3R_8090001 RAL-109_125b 2942 chr3R 8094367 8094434 chr3R 8099722 8099783 Transpac 17 5354 10.0 11.5 10.8 1.4 5416 chr3R 8094367 intron CG7900 + chr3R 8097075 intron CG7900 + chr3R 8099783 intron CG7900 + chr3R_17_8095001 chr3R_8095001 RAL-109_125b 2943 chr3R 8140013 8140024 chr3R 8140108 8140159 6 128 10.5 8.0 9.2 0.6 146 chr3R 8140013 intergenic not near genes chr3R 8140086 intergenic not near genes chr3R 8140159 intergenic not near genes chr3R_6_8140001 chr3R_8140001 RAL-109_125b 2944 chr3R 8156326 8156383 chr3R 8156446 8156478 16 118 10.0 8.0 9.0 1.6 152 chr3R 8156326 intron grn - chr3R 8156402 intron grn - chr3R 8156478 intron grn - chr3R_16_8155001 chr3R_8155001 RAL-109_125b 2945 chr3R 8207518 8207576 chr3R 8208402 8208468 F-element 24 886 4.5 8.5 6.5 3.2 950 chr3R 8207518 intergenic not near genes chr3R 8207993 intergenic not near genes chr3R 8208468 intergenic not near genes chr3R_24_8205001 chr3R_8205001 RAL-109_125b 2946 chr3R 8247857 8247859 chr3R 8247989 8247991 4 132 17.0 10.5 13.8 0.3 134 chr3R 8247857 3` UTR,3` UTR CG18749 +,CG33722 + chr3R 8247924 intron,intron CG18749 +,CG33722 + chr3R 8247991 3` UTR,3` UTR CG18749 +,CG33722 + chr3R_4_8245001 chr3R_8245001 RAL-109_125b 2947 chr3R 8247863 8247917 chr3R 8247980 8248049 21 131 11.0 7.5 9.2 2.1 186 chr3R 8247863 3` UTR,3` UTR CG18749 +,CG33722 + chr3R 8247956 3` UTR,3` UTR CG18749 +,CG33722 + chr3R 8248049 3` UTR,3` UTR CG18749 +,CG33722 + chr3R_21_8245001 chr3R_8245001 RAL-109_125b 2948 chr3R 8339246 8339246 chr3R 21907535 21907536 9 13568289 35.5 36.5 36.0 0.2 13568290 chr3R 8339246 intergenic not near genes chr3R 15123391 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_9_15120001 chr3R_15120001 RAL-109_125b 2949 chr3R 8339247 8339247 chr3R 21907534 21907536 9 13568288 36.0 36.0 36.0 0.2 13568289 chr3R 8339247 intergenic not near genes chr3R 15123392 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_9_15120001 chr3R_15120001 RAL-109_125b 2950 chr3R 8393539 8393604 chr3R 8393671 8393728 17 125 5.5 7.5 6.5 2.3 189 chr3R 8393539 intron CG45263 - chr3R 8393634 intron CG45263 - chr3R 8393728 intron CG45263 - chr3R_17_8390001 chr3R_8390001 RAL-109_125b 2951 chr3R 8395232 8395301 chr3R 8395396 8395465 17 152 6.5 11.5 9.0 1.7 233 chr3R 8395232 intron CG45263 - chr3R 8395348 intron CG45263 - chr3R 8395465 intron CG45263 - chr3R_17_8395001 chr3R_8395001 RAL-109_125b 2952 chr3R 8402970 8403031 chr3R 8412181 8412247 roo 22 9212 12.5 9.0 10.8 1.9 9277 chr3R 8402970 intron CG45263 - chr3R 8407608 intron CG45263 - chr3R 8412247 intron CG45263 - chr3R_22_8405001 chr3R_8405001 RAL-109_125b 2953 chr3R 8570438 8570501 chr3R 8575124 8575181 HMS-Beagle 19 4683 11.5 12.0 11.8 1.5 4743 chr3R 8570438 intergenic not near genes chr3R 8572810 intergenic not near genes chr3R 8575181 intergenic not near genes chr3R_19_8570001 chr3R_8570001 RAL-109_125b 2954 chr3R 8601733 8601766 chr3R 8610936 8610942 roo 11 9200 15.5 7.0 11.2 0.9 9209 chr3R 8601733 intron 5-HT2B + chr3R 8606338 intron 5-HT2B + chr3R 8610942 intron 5-HT2B + chr3R_11_8605001 chr3R_8605001 RAL-109_125b 2955 chr3R 8601771 8601797 chr3R 8610934 8610971 roo 12 9184 10.0 7.0 8.5 1.3 9200 chr3R 8601771 intron 5-HT2B + chr3R 8606371 intron 5-HT2B + chr3R 8610971 intron 5-HT2B + chr3R_12_8605001 chr3R_8605001 RAL-109_125b 2956 chr3R 8614792 8614794 chr3R 8615014 8615047 5 235 2.0 5.5 3.8 1.0 255 chr3R 8614792 intron 5-HT2B + chr3R 8614920 intron 5-HT2B + chr3R 8615047 intron 5-HT2B + chr3R_5_8610001 chr3R_8610001 RAL-109_125b 2957 chr3R 8614803 8614812 chr3R 8615004 8615065 12 240 0.0 3.0 1.5 4.8 262 chr3R 8614803 intron 5-HT2B + chr3R 8614934 intron 5-HT2B + chr3R 8615065 intron 5-HT2B + chr3R_12_8610001 chr3R_8610001 RAL-109_125b 2958 chr3R 8621498 8621506 chr3R 8621625 8621633 4 127 21.0 11.0 16.0 0.2 135 chr3R 8621498 intron 5-HT2B + chr3R 8621566 intron 5-HT2B + chr3R 8621633 intron 5-HT2B + chr3R_4_8620001 chr3R_8620001 RAL-109_125b 2959 chr3R 8636889 8636908 chr3R 8637242 8637260 10 352 15.0 8.0 11.5 0.8 371 chr3R 8636889 intergenic not near genes chr3R 8637074 intergenic not near genes chr3R 8637260 intergenic not near genes chr3R_10_8635001 chr3R_8635001 RAL-109_125b 2960 chr3R 8636915 8636963 chr3R 8637236 8637286 22 345 5.5 6.5 6.0 3.1 371 chr3R 8636915 intergenic not near genes chr3R 8637100 intergenic not near genes chr3R 8637286 intergenic not near genes chr3R_22_8635001 chr3R_8635001 RAL-109_125b 2961 chr3R 8642370 8642441 chr3R 8642497 8642553 17 123 8.5 6.0 7.2 2.1 183 chr3R 8642370 intergenic not near genes chr3R 8642462 intergenic not near genes chr3R 8642553 intergenic not near genes chr3R_17_8640001 chr3R_8640001 RAL-109_125b 2962 chr3R 8707312 8707375 chr3R 8709802 8709866 jockey 20 2487 10.5 9.0 9.8 1.9 2554 chr3R 8707312 intergenic not near genes chr3R 8708589 intergenic not near genes chr3R 8709866 intergenic not near genes chr3R_20_8705001 chr3R_8705001 RAL-109_125b 2963 chr3R 8898159 8898171 chr3R 8913803 8913815 297 5 15644 14.5 9.0 11.8 0.4 15656 chr3R 8898159 intron pyd - chr3R 8905987 intron pyd - chr3R 8913815 intron pyd - chr3R_5_8905001 chr3R_8905001 RAL-109_125b 2964 chr3R 8898172 8898210 chr3R 8913801 8913856 297 18 15642 10.0 9.0 9.5 1.7 15684 chr3R 8898172 intron pyd - chr3R 8906014 intron pyd - chr3R 8913856 intron pyd - chr3R_18_8905001 chr3R_8905001 RAL-109_125b 2965 chr3R 8917848 8917912 chr3R 8917978 8918029 29 127 6.0 7.5 6.8 3.7 181 chr3R 8917848 intron pyd - chr3R 8917938 intron pyd - chr3R 8918029 intron pyd - chr3R_29_8915001 chr3R_8915001 RAL-109_125b 2966 chr3R 8934154 8934226 chr3R 8934288 8934350 37 131 5.5 5.5 5.5 5.7 196 chr3R 8934154 intergenic CR44020 - chr3R 8934252 intergenic CR44020 - chr3R 8934350 3` UTR CR44020 - chr3R_37_8930001 chr3R_8930001 RAL-109_125b 2967 chr3R 9067392 9067465 chr3R 9067522 9067539 40 125 6.0 8.5 7.2 4.9 147 chr3R 9067392 3` UTR pum - chr3R 9067466 3` UTR pum - chr3R 9067539 3` UTR pum - chr3R_40_9065001 chr3R_9065001 RAL-109_125b 2968 chr3R 9079564 9079576 chr3R 9079701 9079713 5 137 21.5 10.5 16.0 0.3 149 chr3R 9079564 intron pum - chr3R 9079638 intron pum - chr3R 9079713 intron pum - chr3R_5_9075001 chr3R_9075001 RAL-109_125b 2969 chr3R 9081996 9082071 chr3R 9082138 9082211 34 137 5.0 7.0 6.0 4.9 215 chr3R 9081996 intron pum - chr3R 9082104 intron pum - chr3R 9082211 intron pum - chr3R_34_9080001 chr3R_9080001 RAL-109_125b 2970 chr3R 9102257 9102305 chr3R 9102367 9102403 17 117 8.5 9.0 8.8 1.7 146 chr3R 9102257 intron pum - chr3R 9102330 intron pum - chr3R 9102403 intron pum - chr3R_17_9100001 chr3R_9100001 RAL-109_125b 2971 chr3R 9108819 9108884 chr3R 9108945 9109010 21 126 5.0 4.5 4.8 3.6 191 chr3R 9108819 intron pum - chr3R 9108914 intron pum - chr3R 9109010 intron pum - chr3R_21_9105001 chr3R_9105001 RAL-109_125b 2972 chr3R 9119481 9119492 chr3R 9119609 9119620 4 128 5.0 12.0 8.5 0.4 139 chr3R 9119481 intron pum - chr3R 9119550 intron pum - chr3R 9119620 intron pum - chr3R_4_9115001 chr3R_9115001 RAL-109_125b 2973 chr3R 9146723 9146730 chr3R 9146857 9146864 4 134 23.0 5.5 14.2 0.3 141 chr3R 9146723 intron pum - chr3R 9146794 intron pum - chr3R 9146864 intron pum - chr3R_4_9145001 chr3R_9145001 RAL-109_125b 2974 chr3R 9146735 9146800 chr3R 9146852 9146884 25 125 11.0 5.5 8.2 2.7 149 chr3R 9146735 intron pum - chr3R 9146810 intron pum - chr3R 9146884 intron pum - chr3R_25_9145001 chr3R_9145001 RAL-109_125b 2975 chr3R 9166489 9166554 chr3R 9166876 9166942 23 385 7.5 13.0 10.2 2.1 453 chr3R 9166489 intron pum - chr3R 9166716 intron pum - chr3R 9166942 intron pum - chr3R_23_9165001 chr3R_9165001 RAL-109_125b 2976 chr3R 9170283 9170358 chr3R 9170788 9170833 21 496 4.5 7.5 6.0 3.0 550 chr3R 9170283 intron pum - chr3R 9170558 intron pum - chr3R 9170833 intron pum - chr3R_21_9170001 chr3R_9170001 RAL-109_125b 2977 chr3R 9192009 9192054 chr3R 9192144 9192189 13 131 6.5 7.0 6.8 1.7 180 chr3R 9192009 intron pum - chr3R 9192099 intron pum - chr3R 9192189 intron pum - chr3R_13_9190001 chr3R_9190001 RAL-109_125b 2978 chr3R 9278763 9278806 chr3R 9284041 9284115 Rt1a 28 5303 7.0 7.0 7.0 3.5 5352 chr3R 9278763 intergenic not near genes chr3R 9281439 intergenic not near genes chr3R 9284115 intergenic not near genes chr3R_28_9280001 chr3R_9280001 RAL-109_125b 2979 chr3R 9284832 9284893 chr3R 9284966 9285022 27 132 9.5 7.0 8.2 2.9 190 chr3R 9284832 intergenic not near genes chr3R 9284927 intergenic not near genes chr3R 9285022 intergenic not near genes chr3R_27_9280001 chr3R_9280001 RAL-109_125b 2980 chr3R 9294976 9295047 chr3R 9295104 9295175 29 128 6.5 5.5 6.0 4.1 199 chr3R 9294976 3` UTR CG8861 - chr3R 9295076 3` UTR CG8861 - chr3R 9295175 3` UTR CG8861 - chr3R_29_9295001 chr3R_9295001 RAL-109_125b 2981 chr3R 9319534 9319597 chr3R 9320019 9320082 jockey 23 484 12.5 8.5 10.5 2.0 548 chr3R 9319534 intron CG8861 - chr3R 9319808 intron CG8861 - chr3R 9320082 intron CG8861 - chr3R_23_9315001 chr3R_9315001 RAL-109_125b 2982 chr3R 9324315 9324389 chr3R 9324668 9324723 20 350 4.0 4.0 4.0 4.0 408 chr3R 9324315 intron CG8861 - chr3R 9324519 intron CG8861 - chr3R 9324723 intron CG8861 - chr3R_20_9320001 chr3R_9320001 RAL-109_125b 2983 chr3R 9332720 9332761 chr3R 9333018 9333061 11 301 9.5 4.5 7.0 1.4 341 chr3R 9332720 exon CG8866 - chr3R 9332890 intron CG8866 - chr3R 9333061 exon CG8866 - chr3R_11_9330001 chr3R_9330001 RAL-109_125b 2984 chr3R 9361805 9361810 chr3R 9362096 9362101 pogo 4 291 12.0 14.0 13.0 0.3 296 chr3R 9361805 3` UTR CG45050 + chr3R 9361953 3` UTR CG45050 + chr3R 9362101 3` UTR CG45050 + chr3R_4_9360001 chr3R_9360001 RAL-109_125b 2985 chr3R 9361813 9361836 chr3R 9362094 9362127 pogo 12 290 6.0 13.5 9.8 1.1 314 chr3R 9361813 3` UTR CG45050 + chr3R 9361970 3` UTR CG45050 + chr3R 9362127 3` UTR CG45050 + chr3R_12_9360001 chr3R_9360001 RAL-109_125b 2986 chr3R 9379094 9379171 chr3R 9379226 9379303 7 128 0.5 4.5 2.5 2.0 209 chr3R 9379094 intron FER - chr3R 9379198 intron FER - chr3R 9379303 intron FER - chr3R_7_9375001 chr3R_9375001 RAL-109_125b 2987 chr3R 9611831 9611862 chr3R 9611963 9611994 11 132 15.5 0.0 7.8 1.2 163 chr3R 9611831 intron CG8312 + chr3R 9611912 intron CG8312 + chr3R 9611994 intron CG8312 + chr3R_11_9610001 chr3R_9610001 RAL-109_125b 2988 chr3R 9620956 9620956 chr3R 21907534 21907536 6 12286579 36.0 36.0 36.0 0.2 12286580 chr3R 9620956 intron CG8312 + chr3R 15764246 intergenic not near genes chr3R 21907536 intergenic CG6678 + chr3R_6_15760001 chr3R_15760001 RAL-109_125b 2989 chr3R 9645229 9645258 chr3R 9645342 9645364 6 109 12.0 13.0 12.5 0.4 135 chr3R 9645229 intron,3` UTR Dh44 +,Fst - chr3R 9645296 intron,exon Dh44 +,Fst - chr3R 9645364 intron,exon Dh44 +,Fst - chr3R_6_9645001 chr3R_9645001 RAL-109_125b 2990 chr3R 9702223 9702287 chr3R 9702345 9702404 13 114 8.5 7.5 8.0 1.4 181 chr3R 9702223 intron Unc-115a - chr3R 9702314 intron Unc-115a - chr3R 9702404 intron Unc-115a - chr3R_13_9700001 chr3R_9700001 RAL-109_125b 2991 chr3R 9780838 9780864 chr3R 9785379 9785406 8 4544 54.0 60.0 57.0 0.1 4568 chr3R 9780838 3` UTR,intron CR31514 -,CG12947 + chr3R 9783122 intergenic CG12947 +,MtnA -,CR31514 - chr3R 9785406 intron CG8500 + chr3R_8_9780001 chr3R_9780001 RAL-109_125b 2992 chr3R 9858636 9858694 chr3R 9858785 9858843 25 149 6.0 9.0 7.5 2.9 207 chr3R 9858636 intron Teh1 - chr3R 9858740 intron Teh1 - chr3R 9858843 intron Teh1 - chr3R_25_9855001 chr3R_9855001 RAL-109_125b 2993 chr3R 9937047 9937095 chr3R 9937152 9937230 22 128 8.5 1.0 4.8 3.8 183 chr3R 9937047 intron Glut4EF + chr3R 9937138 intron Glut4EF + chr3R 9937230 intron Glut4EF + chr3R_22_9935001 chr3R_9935001 RAL-109_125b 2994 chr3R 10073729 10073792 chr3R 10073888 10073951 12 159 8.0 4.0 6.0 1.7 222 chr3R 10073729 3` UTR nerfin-2 + chr3R 10073840 3` UTR CG5361 - chr3R 10073951 exon CG5361 - chr3R_12_10070001 chr3R_10070001 RAL-109_125b 2995 chr3R 10183052 10183097 chr3R 10183179 10183224 8 124 7.5 5.5 6.5 1.1 172 chr3R 10183052 intron CG12814 - chr3R 10183138 intron CG12814 - chr3R 10183224 intron CG12814 - chr3R_8_10180001 chr3R_10180001 RAL-109_125b 2996 chr3R 10194382 10194442 chr3R 10194495 10194519 19 119 7.0 11.0 9.0 1.9 137 chr3R 10194382 intron Syn + chr3R 10194450 intron Syn + chr3R 10194519 intron Syn + chr3R_19_10190001 chr3R_10190001 RAL-109_125b 2997 chr3R 10196912 10196928 chr3R 10202949 10202964 297 6 6037 16.0 4.5 10.2 0.5 6052 chr3R 10196912 exon Syn + chr3R 10199938 intron Syn + chr3R 10202964 intron Syn + chr3R_6_10195001 chr3R_10195001 RAL-109_125b 2998 chr3R 10204953 10204979 chr3R 10205096 10205122 5 143 14.5 9.5 12.0 0.4 169 chr3R 10204953 intron,exon Syn +,Timp - chr3R 10205038 intron,intron Syn +,Timp - chr3R 10205122 intron,exon Syn +,Timp - chr3R_5_10205001 chr3R_10205001 RAL-109_125b 2999 chr3R 10204981 10205028 chr3R 10205089 10205147 12 134 3.5 7.0 5.2 1.9 166 chr3R 10204981 intron,exon Syn +,Timp - chr3R 10205064 intron,intron Syn +,Timp - chr3R 10205147 intron,exon Syn +,Timp - chr3R_12_10205001 chr3R_10205001 RAL-109_125b 3000 chr3R 10231743 10231812 chr3R 10237370 10237430 mdg3 23 5625 10.0 11.5 10.8 1.9 5687 chr3R 10231743 intron CG42795 + chr3R 10234586 intron CG42795 + chr3R 10237430 intron CG42795 + chr3R_23_10230001 chr3R_10230001 RAL-109_125b 3001 chr3R 10255301 10255387 chr3R 10260814 10260877 I-element 12 5506 0.0 5.0 2.5 3.4 5576 chr3R 10255301 intergenic CG3999 +,Sirt6 - chr3R 10258089 intron Sirt6 - chr3R 10260877 exon Sirt6 - chr3R_12_10255001 chr3R_10255001 RAL-109_125b 3002 chr3R 10374042 10374100 chr3R 10374158 10374228 16 127 10.0 8.0 9.0 1.6 186 chr3R 10374042 intron Rfx - chr3R 10374135 intron Rfx - chr3R 10374228 intron Rfx - chr3R_16_10370001 chr3R_10370001 RAL-109_125b 3003 chr3R 10420640 10420654 chr3R 10420766 10420780 5 126 6.0 18.0 12.0 0.4 140 chr3R 10420640 intergenic not near genes chr3R 10420710 intergenic not near genes chr3R 10420780 intergenic not near genes chr3R_5_10420001 chr3R_10420001 RAL-109_125b 3004 chr3R 10430634 10430705 chr3R 10430768 10430818 25 136 12.5 9.0 10.8 2.1 184 chr3R 10430634 intergenic not near genes chr3R 10430726 intergenic not near genes chr3R 10430818 intergenic not near genes chr3R_25_10430001 chr3R_10430001 RAL-109_125b 3005 chr3R 10596575 10596640 chr3R 10596701 10596765 14 114 10.5 7.5 9.0 1.4 190 chr3R 10596575 intron hth - chr3R 10596670 intron hth - chr3R 10596765 intron hth - chr3R_14_10595001 chr3R_10595001 RAL-109_125b 3006 chr3R 10727605 10727620 chr3R 10727735 10727736 6 128 17.5 11.0 14.2 0.4 131 chr3R 10727605 intergenic not near genes chr3R 10727670 intergenic not near genes chr3R 10727736 intergenic not near genes chr3R_6_10725001 chr3R_10725001 RAL-109_125b 3007 chr3R 10727622 10727675 chr3R 10727732 10727805 18 126 7.5 10.0 8.8 1.8 183 chr3R 10727622 intergenic not near genes chr3R 10727714 intergenic not near genes chr3R 10727805 intergenic not near genes chr3R_18_10725001 chr3R_10725001 RAL-109_125b 3008 chr3R 10745380 10745448 chr3R 10745517 10745578 22 128 7.0 5.5 6.2 3.1 198 chr3R 10745380 intron TkR86C - chr3R 10745479 intron TkR86C - chr3R 10745578 intron TkR86C - chr3R_22_10745001 chr3R_10745001 RAL-109_125b 3009 chr3R 10785772 10785784 chr3R 10785901 10785913 6 129 21.0 7.0 14.0 0.4 141 chr3R 10785772 intron Rbp1 + chr3R 10785842 intron Rbp1 + chr3R 10785913 intron Rbp1 + chr3R_6_10785001 chr3R_10785001 RAL-109_125b 3010 chr3R 10785785 10785804 chr3R 10785895 10785933 7 126 17.5 7.0 12.2 0.5 148 chr3R 10785785 intron Rbp1 + chr3R 10785859 intron Rbp1 + chr3R 10785933 intron Rbp1 + chr3R_7_10785001 chr3R_10785001 RAL-109_125b 3011 chr3R 10785806 10785826 chr3R 10785889 10785955 8 123 14.0 8.0 11.0 0.7 149 chr3R 10785806 intron Rbp1 + chr3R 10785880 intron Rbp1 + chr3R 10785955 intron Rbp1 + chr3R_8_10785001 chr3R_10785001 RAL-109_125b 3012 chr3R 10804136 10804199 chr3R 10811718 10811781 17.6 14 7581 2.5 4.0 3.2 3.3 7645 chr3R 10804136 intergenic CG14692 - chr3R 10807958 intergenic not near genes chr3R 10811781 3` UTR CG14693 - chr3R_14_10805001 chr3R_10805001 RAL-109_125b 3013 chr3R 10830902 10830930 chr3R 10831054 10831082 4 152 6.5 17.0 11.8 0.3 180 chr3R 10830902 intron Cad86C + chr3R 10830992 intron Cad86C + chr3R 10831082 intron Cad86C + chr3R_4_10830001 chr3R_10830001 RAL-109_125b 3014 chr3R 10868564 10868624 chr3R 10868671 10868717 16 101 7.0 6.0 6.5 2.1 153 chr3R 10868564 5` UTR SelR - chr3R 10868640 5` UTR SelR - chr3R 10868717 5` UTR Tsp86D + chr3R_16_10865001 chr3R_10865001 RAL-109_125b 3015 chr3R 10870833 10870886 chr3R 10870954 10871017 19 129 6.5 5.5 6.0 2.7 184 chr3R 10870833 intergenic Fdh -,Tsp86D + chr3R 10870925 3` UTR Fdh - chr3R 10871017 exon Fdh - chr3R_19_10870001 chr3R_10870001 RAL-109_125b 3016 chr3R 10912592 10912652 chr3R 10912713 10912773 17 124 10.5 13.5 12.0 1.3 181 chr3R 10912592 intergenic not near genes chr3R 10912682 intergenic not near genes chr3R 10912773 intergenic not near genes chr3R_17_10910001 chr3R_10910001 RAL-109_125b 3017 chr3R 10919649 10919660 chr3R 10919777 10919786 10 128 16.0 8.0 12.0 0.8 137 chr3R 10919649 intergenic not near genes chr3R 10919718 intergenic not near genes chr3R 10919786 intergenic not near genes chr3R_10_10915001 chr3R_10915001 RAL-109_125b 3018 chr3R 10919663 10919717 chr3R 10919775 10919843 18 126 6.0 6.5 6.2 2.5 180 chr3R 10919663 intergenic not near genes chr3R 10919753 intergenic not near genes chr3R 10919843 intergenic not near genes chr3R_18_10915001 chr3R_10915001 RAL-109_125b 3019 chr3R 10920013 10920067 chr3R 10920141 10920195 14 128 7.0 8.0 7.5 1.6 182 chr3R 10920013 intergenic not near genes chr3R 10920104 intergenic not near genes chr3R 10920195 intergenic not near genes chr3R_14_10920001 chr3R_10920001 RAL-109_125b 3020 chr3R 10957855 10957882 chr3R 10963284 10963319 Rt1c 12 5431 10.5 6.5 8.5 1.3 5464 chr3R 10957855 intergenic not near genes chr3R 10960587 intergenic not near genes chr3R 10963319 intergenic not near genes chr3R_12_10960001 chr3R_10960001 RAL-109_125b 3021 chr3R 10994233 10994308 chr3R 10994362 10994437 22 125 5.0 7.0 6.0 3.1 204 chr3R 10994233 intron CG34114 + chr3R 10994335 intron CG34114 + chr3R 10994437 intron CG34114 + chr3R_22_10990001 chr3R_10990001 RAL-109_125b 3022 chr3R 11024134 11024161 chr3R 11024280 11024307 7 144 19.0 11.0 15.0 0.4 173 chr3R 11024134 intron CG34114 + chr3R 11024220 intron CG34114 + chr3R 11024307 intron CG34114 + chr3R_7_11020001 chr3R_11020001 RAL-109_125b 3023 chr3R 11024164 11024204 chr3R 11024277 11024350 19 138 7.0 9.5 8.2 2.1 186 chr3R 11024164 intron CG34114 + chr3R 11024257 intron CG34114 + chr3R 11024350 intron CG34114 + chr3R_19_11020001 chr3R_11020001 RAL-109_125b 3024 chr3R 11030026 11030096 chr3R 11030170 11030240 24 141 9.0 9.0 9.0 2.4 214 chr3R 11030026 intron CG34114 + chr3R 11030133 intron CG34114 + chr3R 11030240 intron CG34114 + chr3R_24_11030001 chr3R_11030001 RAL-109_125b 3025 chr3R 11056848 11056905 chr3R 11056976 11056983 15 125 6.5 0.0 3.2 3.6 135 chr3R 11056848 intergenic not near genes chr3R 11056916 intergenic not near genes chr3R 11056983 intergenic not near genes chr3R_15_11055001 chr3R_11055001 RAL-109_125b 3026 chr3R 11057369 11057379 chr3R 11057483 11057508 8 125 22.5 13.5 18.0 0.4 139 chr3R 11057369 intergenic not near genes chr3R 11057438 intergenic not near genes chr3R 11057508 intergenic not near genes chr3R_8_11055001 chr3R_11055001 RAL-109_125b 3027 chr3R 11057381 11057426 chr3R 11057480 11057540 25 119 10.5 11.0 10.8 2.1 159 chr3R 11057381 intergenic not near genes chr3R 11057460 intergenic not near genes chr3R 11057540 intergenic not near genes chr3R_25_11055001 chr3R_11055001 RAL-109_125b 3028 chr3R 11065562 11065609 chr3R 11071250 11071263 297 4 5679 3.0 4.5 3.8 0.8 5701 chr3R 11065562 intergenic not near genes chr3R 11068412 intergenic not near genes chr3R 11071263 intergenic not near genes chr3R_4_11065001 chr3R_11065001 RAL-109_125b 3029 chr3R 11078906 11078977 chr3R 11079036 11079053 17 121 6.5 5.5 6.0 2.4 147 chr3R 11078906 intergenic not near genes chr3R 11078980 intergenic not near genes chr3R 11079053 intergenic not near genes chr3R_17_11075001 chr3R_11075001 RAL-109_125b 3030 chr3R 11104223 11104277 chr3R 11104352 11104394 14 125 3.0 4.0 3.5 3.1 171 chr3R 11104223 intergenic not near genes chr3R 11104308 intergenic not near genes chr3R 11104394 intergenic not near genes chr3R_14_11100001 chr3R_11100001 RAL-109_125b 3031 chr3R 11142466 11142544 chr3R 11142630 11142673 27 157 6.5 9.5 8.0 3.0 207 chr3R 11142466 intergenic not near genes chr3R 11142570 intergenic not near genes chr3R 11142673 intergenic not near genes chr3R_27_11140001 chr3R_11140001 RAL-109_125b 3032 chr3R 11149845 11149897 chr3R 11149966 11150030 14 138 8.5 9.0 8.8 1.4 185 chr3R 11149845 intergenic not near genes chr3R 11149938 intergenic not near genes chr3R 11150030 intergenic not near genes chr3R_14_11145001 chr3R_11145001 RAL-109_125b 3033 chr3R 11174541 11174610 chr3R 11175305 11175361 12 758 36.0 32.0 34.0 0.3 820 chr3R 11174541 exon Ugt86Dj - chr3R 11174951 intron Ugt86Dj - chr3R 11175361 exon Ugt86Dj - chr3R_12_11170001 chr3R_11170001 RAL-109_125b 3034 chr3R 11175311 11175375 chr3R 11175441 11175490 23 133 30.5 37.0 33.8 0.7 179 chr3R 11175311 exon Ugt86Dj - chr3R 11175400 5` UTR Ugt86Dj - chr3R 11175490 intergenic Ugt86Dh +,Ugt86Dj - chr3R_23_11175001 chr3R_11175001 RAL-109_125b 3035 chr3R 11291403 11291478 chr3R 11291641 11291716 27 236 8.5 3.5 6.0 3.9 313 chr3R 11291403 intron CR31386 - chr3R 11291560 intron CR31386 - chr3R 11291716 intron CR31386 - chr3R_27_11290001 chr3R_11290001 RAL-109_125b 3036 chr3R 11307150 11307216 chr3R 11307287 11307328 16 121 6.0 9.0 7.5 1.9 178 chr3R 11307150 intergenic not near genes chr3R 11307239 intergenic not near genes chr3R 11307328 intergenic not near genes chr3R_16_11305001 chr3R_11305001 RAL-109_125b 3037 chr3R 11437169 11437193 chr3R 11440623 11440677 12 3462 52.0 50.5 51.2 0.2 3508 chr3R 11437169 exon CG5281 + chr3R 11438923 intron,intron sals -,CG17230 + chr3R 11440677 intron,intron sals -,CG17230 + chr3R_12_11435001 chr3R_11435001 RAL-109_125b 3038 chr3R 11437163 11437213 chr3R 11440681 11440693 6 3481 57.0 42.5 49.8 0.1 3530 chr3R 11437163 exon CG5281 + chr3R 11438928 intron,intron sals -,CG17230 + chr3R 11440693 intron,intron sals -,CG17230 + chr3R_6_11435001 chr3R_11435001 RAL-109_125b 3039 chr3R 11444019 11444077 chr3R 11444167 11444205 16 142 4.0 6.0 5.0 2.7 186 chr3R 11444019 intron,intron sals -,CG17230 + chr3R 11444112 intron,intron sals -,CG17230 + chr3R 11444205 intron,intron sals -,CG17230 + chr3R_16_11440001 chr3R_11440001 RAL-109_125b 3040 chr3R 11476905 11476973 chr3R 11477057 11477125 25 151 6.5 7.5 7.0 3.1 220 chr3R 11476905 intergenic not near genes chr3R 11477015 intergenic not near genes chr3R 11477125 intergenic not near genes chr3R_25_11475001 chr3R_11475001 RAL-109_125b 3041 chr3R 11694690 11694749 chr3R 11694839 11694887 18 145 5.0 8.0 6.5 2.4 197 chr3R 11694690 intergenic Fer3 - chr3R 11694788 intergenic Fer3 - chr3R 11694887 intergenic not near genes chr3R_18_11690001 chr3R_11690001 RAL-109_125b 3042 chr3R 11708596 11708661 chr3R 11708854 11708919 26 255 8.5 0.0 4.2 5.0 323 chr3R 11708596 intergenic not near genes chr3R 11708758 intergenic not near genes chr3R 11708919 intergenic not near genes chr3R_26_11705001 chr3R_11705001 RAL-109_125b 3043 chr3R 11734114 11734136 chr3R 11734283 11734305 5 168 18.0 5.0 11.5 0.4 191 chr3R 11734114 intergenic not near genes chr3R 11734210 intergenic not near genes chr3R 11734305 intergenic not near genes chr3R_5_11730001 chr3R_11730001 RAL-109_125b 3044 chr3R 11734139 11734186 chr3R 11734281 11734315 24 157 10.0 5.0 7.5 2.8 176 chr3R 11734139 intergenic not near genes chr3R 11734227 intergenic not near genes chr3R 11734315 intergenic not near genes chr3R_24_11730001 chr3R_11730001 RAL-109_125b 3045 chr3R 11811045 11811118 chr3R 11811191 11811264 33 138 9.5 10.0 9.8 3.1 219 chr3R 11811045 5` UTR ClC-a - chr3R 11811154 intron ClC-a - chr3R 11811264 intron ClC-a - chr3R_33_11810001 chr3R_11810001 RAL-109_125b 3046 chr3R 11830303 11830359 chr3R 11830437 11830493 18 134 7.0 9.0 8.0 2.0 190 chr3R 11830303 intron CG6959 - chr3R 11830398 intron CG6959 - chr3R 11830493 intron CG6959 - chr3R_18_11830001 chr3R_11830001 RAL-109_125b 3047 chr3R 11830927 11830943 chr3R 11831121 11831132 5 193 10.5 2.0 6.2 0.7 205 chr3R 11830927 intron CG6959 - chr3R 11831030 intron CG6959 - chr3R 11831132 intron CG6959 - chr3R_5_11830001 chr3R_11830001 RAL-109_125b 3048 chr3R 11841018 11841089 chr3R 11846259 11846305 BS 18 5237 12.0 12.5 12.2 1.4 5287 chr3R 11841018 intron CG6959 - chr3R 11843662 intron CG6959 - chr3R 11846305 intron CG6959 - chr3R_18_11840001 chr3R_11840001 RAL-109_125b 3049 chr3R 11920911 11920983 chr3R 11921173 11921245 26 256 7.0 6.5 6.8 3.3 334 chr3R 11920911 intron Cad87A - chr3R 11921078 intron Cad87A - chr3R 11921245 intron Cad87A - chr3R_26_11920001 chr3R_11920001 RAL-109_125b 3050 chr3R 11957810 11957880 chr3R 11958143 11958210 S-element 14 332 5.5 2.0 3.8 2.9 400 chr3R 11957810 intergenic not near genes chr3R 11958010 intergenic not near genes chr3R 11958210 intergenic not near genes chr3R_14_11955001 chr3R_11955001 RAL-109_125b 3051 chr3R 12016995 12017022 chr3R 12017122 12017133 10 125 10.5 22.5 16.5 0.6 138 chr3R 12016995 5` UTR CG3313 - chr3R 12017064 intergenic CG3313 -,Spt3 + chr3R 12017133 intergenic Spt3 +,CG3313 - chr3R_10_12015001 chr3R_12015001 RAL-109_125b 3052 chr3R 12022837 12022908 chr3R 12025063 12025135 pogo 27 2227 11.0 7.5 9.2 2.6 2298 chr3R 12022837 intergenic not near genes chr3R 12023986 intergenic not near genes chr3R 12025135 intergenic not near genes chr3R_27_12020001 chr3R_12020001 RAL-109_125b 3053 chr3R 12045126 12045202 chr3R 12045252 12045328 27 123 9.5 5.5 7.5 3.2 202 chr3R 12045126 intergenic not near genes chr3R 12045227 intergenic not near genes chr3R 12045328 intergenic not near genes chr3R_27_12045001 chr3R_12045001 RAL-109_125b 3054 chr3R 12080832 12080893 chr3R 12080942 12081021 29 125 5.5 6.5 6.0 4.1 189 chr3R 12080832 intron CG14741 - chr3R 12080926 intron CG14741 - chr3R 12081021 intron CG14741 - chr3R_29_12080001 chr3R_12080001 RAL-109_125b 3055 chr3R 12101172 12101235 chr3R 12101312 12101374 18 136 3.0 3.5 3.2 4.3 202 chr3R 12101172 intron dpr17 + chr3R 12101273 intron dpr17 + chr3R 12101374 intron dpr17 + chr3R_18_12100001 chr3R_12100001 RAL-109_125b 3056 chr3R 12102838 12102868 chr3R 12102983 12103006 10 142 13.0 12.0 12.5 0.7 168 chr3R 12102838 intron dpr17 + chr3R 12102922 intron dpr17 + chr3R 12103006 intron dpr17 + chr3R_10_12100001 chr3R_12100001 RAL-109_125b 3057 chr3R 12169190 12169219 chr3R 12169318 12169337 11 127 15.5 8.5 12.0 0.8 147 chr3R 12169190 intergenic not near genes chr3R 12169264 intergenic not near genes chr3R 12169337 intergenic not near genes chr3R_11_12165001 chr3R_12165001 RAL-109_125b 3058 chr3R 12202245 12202278 chr3R 12202404 12202437 10 156 15.0 8.5 11.8 0.8 192 chr3R 12202245 intergenic not near genes chr3R 12202341 intergenic not near genes chr3R 12202437 intergenic not near genes chr3R_10_12200001 chr3R_12200001 RAL-109_125b 3059 chr3R 12202279 12202310 chr3R 12202403 12202469 12 151 7.5 7.5 7.5 1.4 190 chr3R 12202279 intergenic not near genes chr3R 12202374 intergenic not near genes chr3R 12202469 intergenic not near genes chr3R_12_12200001 chr3R_12200001 RAL-109_125b 3060 chr3R 12214346 12214365 chr3R 12214480 12214506 6 140 7.5 17.5 12.5 0.4 160 chr3R 12214346 3` UTR CG4848 - chr3R 12214426 3` UTR CG4848 - chr3R 12214506 3` UTR,5` UTR CG4848 -,CG14742 + chr3R_6_12210001 chr3R_12210001 RAL-109_125b 3061 chr3R 12344079 12344156 chr3R 12344206 12344256 25 123 6.5 7.0 6.8 3.2 177 chr3R 12344079 intergenic not near genes chr3R 12344168 intergenic not near genes chr3R 12344256 intergenic not near genes chr3R_25_12340001 chr3R_12340001 RAL-109_125b 3062 chr3R 12392840 12392896 chr3R 12392990 12393046 20 148 10.5 7.5 9.0 2.0 206 chr3R 12392840 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R 12392943 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R 12393046 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R_20_12390001 chr3R_12390001 RAL-109_125b 3063 chr3R 12420912 12420946 chr3R 12421023 12421082 15 132 5.0 5.0 5.0 2.5 170 chr3R 12420912 3` UTR pps + chr3R 12420997 3` UTR pps + chr3R 12421082 3` UTR pps + chr3R_15_12420001 chr3R_12420001 RAL-109_125b 3064 chr3R 12569917 12569935 chr3R 12570039 12570066 4 128 19.0 11.5 15.2 0.2 149 chr3R 12569917 intron Octbeta2R - chr3R 12569992 intron Octbeta2R - chr3R 12570066 intron Octbeta2R - chr3R_4_12565001 chr3R_12565001 RAL-109_125b 3065 chr3R 12569937 12569982 chr3R 12570032 12570113 22 107 8.0 11.0 9.5 2.1 176 chr3R 12569937 intron Octbeta2R - chr3R 12570025 intron Octbeta2R - chr3R 12570113 intron Octbeta2R - chr3R_22_12570001 chr3R_12570001 RAL-109_125b 3066 chr3R 12666719 12666789 chr3R 12666896 12666966 20 173 11.0 4.5 7.8 2.3 247 chr3R 12666719 intron CG14395 + chr3R 12666842 intron CG14395 + chr3R 12666966 intron CG14395 + chr3R_20_12665001 chr3R_12665001 RAL-109_125b 3067 chr3R 12733426 12733506 chr3R 12733553 12733631 30 120 6.5 10.0 8.2 3.3 205 chr3R 12733426 intergenic not near genes chr3R 12733528 intergenic not near genes chr3R 12733631 intergenic not near genes chr3R_30_12730001 chr3R_12730001 RAL-109_125b 3068 chr3R 12735136 12735179 chr3R 12735435 12735479 9 299 6.5 8.5 7.5 1.1 343 chr3R 12735136 intergenic not near genes chr3R 12735308 intergenic not near genes chr3R 12735479 intergenic not near genes chr3R_9_12735001 chr3R_12735001 RAL-109_125b 3069 chr3R 12763060 12763151 chr3R 12763198 12763278 20 132 0.0 4.0 2.0 6.7 218 chr3R 12763060 intron beat-Vc - chr3R 12763169 intron beat-Vc - chr3R 12763278 intron beat-Vc - chr3R_20_12760001 chr3R_12760001 RAL-109_125b 3070 chr3R 12787899 12787956 chr3R 12788032 12788089 18 132 9.5 5.0 7.2 2.2 190 chr3R 12787899 intergenic not near genes chr3R 12787994 intergenic not near genes chr3R 12788089 intergenic not near genes chr3R_18_12785001 chr3R_12785001 RAL-109_125b 3071 chr3R 12809995 12810004 chr3R 12810110 12810130 4 121 13.5 10.5 12.0 0.3 135 chr3R 12809995 intergenic not near genes chr3R 12810062 intergenic not near genes chr3R 12810130 intergenic not near genes chr3R_4_12810001 chr3R_12810001 RAL-109_125b 3072 chr3R 12810005 12810039 chr3R 12810096 12810114 4 105 12.0 11.5 11.8 0.3 109 chr3R 12810005 intergenic not near genes chr3R 12810060 intergenic not near genes chr3R 12810114 intergenic not near genes chr3R_4_12810001 chr3R_12810001 RAL-109_125b 3073 chr3R 12866454 12866515 chr3R 12866640 12866716 31 198 6.5 8.5 7.5 3.6 262 chr3R 12866454 intergenic not near genes chr3R 12866585 intergenic not near genes chr3R 12866716 intergenic not near genes chr3R_31_12865001 chr3R_12865001 RAL-109_125b 3074 chr3R 12877620 12877679 chr3R 12877869 12877943 29 260 5.5 5.0 5.2 4.7 323 chr3R 12877620 intergenic not near genes chr3R 12877782 intergenic not near genes chr3R 12877943 intergenic not near genes chr3R_29_12875001 chr3R_12875001 RAL-109_125b 3075 chr3R 12920120 12920133 chr3R 12925373 12925384 copia 5 5253 17.5 10.5 14.0 0.3 5264 chr3R 12920120 intron beat-Vb + chr3R 12922752 intron beat-Vb + chr3R 12925384 intron beat-Vb + chr3R_5_12920001 chr3R_12920001 RAL-109_125b 3076 chr3R 12920145 12920177 chr3R 12925362 12925430 copia 10 5244 6.0 10.0 8.0 1.1 5285 chr3R 12920145 intron beat-Vb + chr3R 12922788 intron beat-Vb + chr3R 12925430 intron beat-Vb + chr3R_10_12920001 chr3R_12920001 RAL-109_125b 3077 chr3R 12926680 12926750 chr3R 12926841 12926911 32 161 4.5 10.0 7.2 3.9 231 chr3R 12926680 intron beat-Vb + chr3R 12926796 intron beat-Vb + chr3R 12926911 intron beat-Vb + chr3R_32_12925001 chr3R_12925001 RAL-109_125b 3078 chr3R 12931174 12931246 chr3R 12931301 12931373 25 123 6.0 6.5 6.2 3.5 199 chr3R 12931174 intron,3` UTR beat-Vb +,CR44236 - chr3R 12931274 intron,3` UTR beat-Vb +,CR44236 - chr3R 12931373 intron beat-Vb + chr3R_25_12930001 chr3R_12930001 RAL-109_125b 3079 chr3R 12943937 12943991 chr3R 12944074 12944128 13 137 8.5 13.0 10.8 1.1 191 chr3R 12943937 intergenic not near genes chr3R 12944032 intergenic not near genes chr3R 12944128 intergenic not near genes chr3R_13_12940001 chr3R_12940001 RAL-109_125b 3080 chr3R 12952241 12952306 chr3R 12952416 12952470 23 168 7.5 6.5 7.0 2.9 229 chr3R 12952241 intron grsm - chr3R 12952356 intron grsm - chr3R 12952470 intron grsm - chr3R_23_12950001 chr3R_12950001 RAL-109_125b 3081 chr3R 12972505 12972581 chr3R 12972694 12972770 31 187 8.5 5.5 7.0 3.9 265 chr3R 12972505 intron CG7381 - chr3R 12972638 intron CG7381 - chr3R 12972770 intron CG7381 - chr3R_31_12970001 chr3R_12970001 RAL-109_125b 3082 chr3R 13059914 13059977 chr3R 13060159 13060222 22 242 6.5 1.5 4.0 4.4 308 chr3R 13059914 intron sim + chr3R 13060068 intron sim + chr3R 13060222 intron sim + chr3R_22_13060001 chr3R_13060001 RAL-109_125b 3083 chr3R 13075313 13075369 chr3R 13075444 13075500 15 131 8.0 5.5 6.8 1.9 187 chr3R 13075313 intron sim + chr3R 13075406 intron sim + chr3R 13075500 intron sim + chr3R_15_13075001 chr3R_13075001 RAL-109_125b 3084 chr3R 13089690 13089709 chr3R 13089822 13089841 7 132 21.0 5.5 13.2 0.5 151 chr3R 13089690 intron,3` UTR timeout +,CG34308 + chr3R 13089766 intron,3` UTR timeout +,CG34308 + chr3R 13089841 intron,3` UTR timeout +,CG34308 + chr3R_7_13085001 chr3R_13085001 RAL-109_125b 3085 chr3R 13089710 13089767 chr3R 13089816 13089863 19 120 9.0 5.5 7.2 2.3 153 chr3R 13089710 intron,3` UTR timeout +,CG34308 + chr3R 13089786 intron,3` UTR timeout +,CG34308 + chr3R 13089863 intron,3` UTR timeout +,CG34308 + chr3R_19_13085001 chr3R_13085001 RAL-109_125b 3086 chr3R 13112749 13112813 chr3R 13113108 13113177 32 362 8.0 0.5 4.2 6.2 428 chr3R 13112749 intron timeout + chr3R 13112963 intron timeout + chr3R 13113177 intron timeout + chr3R_32_13110001 chr3R_13110001 RAL-109_125b 3087 chr3R 13120726 13120795 chr3R 13120853 13120920 18 119 4.0 4.5 4.2 3.5 194 chr3R 13120726 intron timeout + chr3R 13120823 intron timeout + chr3R 13120920 intron timeout + chr3R_18_13120001 chr3R_13120001 RAL-109_125b 3088 chr3R 13135782 13135850 chr3R 13138007 13138075 pogo 22 2225 11.5 9.0 10.2 2.0 2293 chr3R 13135782 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13136928 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138075 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_22_13135001 chr3R_13135001 RAL-109_125b 3089 chr3R 13142989 13143066 chr3R 13148609 13148623 mdg3 30 5619 3.0 6.5 4.8 5.2 5634 chr3R 13142989 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145806 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148623 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_30_13145001 chr3R_13145001 RAL-109_125b 3090 chr3R 13151311 13151393 chr3R 13151491 13151567 11 173 0.0 10.5 5.2 1.8 256 chr3R 13151311 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13151439 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13151567 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_11_13150001 chr3R_13150001 RAL-109_125b 3091 chr3R 13219299 13219305 chr3R 13219433 13219449 4 141 1.5 8.0 4.8 0.7 150 chr3R 13219299 intergenic CG8476 - chr3R 13219374 intergenic CG8476 - chr3R 13219449 intergenic CG8476 - chr3R_4_13215001 chr3R_13215001 RAL-109_125b 3092 chr3R 13219306 13219334 chr3R 13219415 13219480 12 134 1.5 5.5 3.5 2.7 174 chr3R 13219306 intergenic CG8476 - chr3R 13219393 intergenic CG8476 - chr3R 13219480 intergenic CG8476 - chr3R_12_13215001 chr3R_13215001 RAL-109_125b 3093 chr3R 13237639 13237710 chr3R 13237770 13237799 15 129 7.0 5.0 6.0 2.1 160 chr3R 13237639 intron Ace - chr3R 13237719 intron Ace - chr3R 13237799 intron Ace - chr3R_15_13235001 chr3R_13235001 RAL-109_125b 3094 chr3R 13248605 13248629 chr3R 13248754 13248778 5 149 18.0 0.5 9.2 0.5 173 chr3R 13248605 intron Ace - chr3R 13248692 intron Ace - chr3R 13248778 intron Ace - chr3R_5_13245001 chr3R_13245001 RAL-109_125b 3095 chr3R 13248631 13248671 chr3R 13248752 13248820 17 146 7.0 0.5 3.8 3.5 189 chr3R 13248631 intron Ace - chr3R 13248726 intron Ace - chr3R 13248820 intron Ace - chr3R_17_13245001 chr3R_13245001 RAL-109_125b 3096 chr3R 13249565 13249594 chr3R 13249729 13249758 5 164 6.5 1.5 4.0 1.0 193 chr3R 13249565 intron Ace - chr3R 13249662 intron Ace - chr3R 13249758 intron Ace - chr3R_5_13245001 chr3R_13245001 RAL-109_125b 3097 chr3R 13253374 13253409 chr3R 13253504 13253539 11 130 4.5 5.5 5.0 1.8 165 chr3R 13253374 intron Ace - chr3R 13253456 intron Ace - chr3R 13253539 intron Ace - chr3R_11_13250001 chr3R_13250001 RAL-109_125b 3098 chr3R 13272013 13272048 chr3R 13272145 13272183 11 132 16.5 5.0 10.8 0.9 170 chr3R 13272013 intergenic CG8449 - chr3R 13272098 intergenic CG8449 - chr3R 13272183 intergenic CG8449 - chr3R_11_13270001 chr3R_13270001 RAL-109_125b 3099 chr3R 13272055 13272067 chr3R 13272190 13272202 7 134 13.0 18.0 15.5 0.4 147 chr3R 13272055 intergenic CG8449 - chr3R 13272128 intergenic CG8449 - chr3R 13272202 intergenic CG8449 - chr3R_7_13270001 chr3R_13270001 RAL-109_125b 3100 chr3R 13272068 13272084 chr3R 13272163 13272179 11 122 7.5 11.5 9.5 1.0 111 chr3R 13272068 intergenic CG8449 - chr3R 13272124 intergenic CG8449 - chr3R 13272179 intergenic CG8449 - chr3R_11_13270001 chr3R_13270001 RAL-109_125b 3101 chr3R 13272323 13272405 chr3R 13272575 13272625 34 250 6.5 5.5 6.0 4.9 302 chr3R 13272323 intergenic CG8449 - chr3R 13272474 intergenic CG8449 - chr3R 13272625 intergenic not near genes chr3R_34_13270001 chr3R_13270001 RAL-109_125b 3102 chr3R 13274178 13274205 chr3R 13274297 13274330 15 126 15.0 9.5 12.2 1.1 152 chr3R 13274178 intergenic not near genes chr3R 13274254 intergenic not near genes chr3R 13274330 intergenic not near genes chr3R_15_13270001 chr3R_13270001 RAL-109_125b 3103 chr3R 13274207 13274244 chr3R 13274290 13274367 14 119 8.5 9.0 8.8 1.4 160 chr3R 13274207 intergenic not near genes chr3R 13274287 intergenic not near genes chr3R 13274367 intergenic not near genes chr3R_14_13270001 chr3R_13270001 RAL-109_125b 3104 chr3R 13293975 13294038 chr3R 13294179 13294252 26 212 7.0 6.0 6.5 3.5 277 chr3R 13293975 intergenic not near genes chr3R 13294114 intergenic not near genes chr3R 13294252 intergenic CG8773 + chr3R_26_13290001 chr3R_13290001 RAL-109_125b 3105 chr3R 13311550 13311641 chr3R 13318882 13318942 Doc 8 7324 31.5 6.0 18.8 0.4 7392 chr3R 13311550 exon CG32473 + chr3R 13315246 intergenic not near genes chr3R 13318942 intergenic CG45080 - chr3R_8_13315001 chr3R_13315001 RAL-109_125b 3106 chr3R 13348958 13349030 chr3R 13349084 13349137 6 114 9.5 6.0 7.8 0.7 179 chr3R 13348958 intergenic not near genes chr3R 13349048 intergenic not near genes chr3R 13349137 intergenic not near genes chr3R_6_13345001 chr3R_13345001 RAL-109_125b 3107 chr3R 13364965 13365027 chr3R 13365114 13365176 24 143 7.0 8.0 7.5 2.8 211 chr3R 13364965 intron,5` UTR poly -,Dic1 + chr3R 13365070 intron,5` UTR poly -,Dic1 + chr3R 13365176 intron,5` UTR poly -,Dic1 + chr3R_24_13365001 chr3R_13365001 RAL-109_125b 3108 chr3R 13418617 13418672 chr3R 13418743 13418798 24 125 7.5 5.5 6.5 3.2 181 chr3R 13418617 intergenic not near genes chr3R 13418708 intergenic not near genes chr3R 13418798 intergenic not near genes chr3R_24_13415001 chr3R_13415001 RAL-109_125b 3109 chr3R 13435347 13435416 chr3R 13435572 13435641 22 223 6.5 9.5 8.0 2.4 294 chr3R 13435347 intergenic yrt - chr3R 13435494 intergenic not near genes chr3R 13435641 intergenic not near genes chr3R_22_13435001 chr3R_13435001 RAL-109_125b 3110 chr3R 13470809 13470878 chr3R 13471181 13471257 20 373 3.5 1.5 2.5 5.7 448 chr3R 13470809 intergenic not near genes chr3R 13471033 intergenic not near genes chr3R 13471257 intergenic not near genes chr3R_20_13470001 chr3R_13470001 RAL-109_125b 3111 chr3R 13501198 13501261 chr3R 13501336 13501397 8 135 6.5 0.0 3.2 1.9 199 chr3R 13501198 intergenic not near genes chr3R 13501298 intergenic not near genes chr3R 13501397 intergenic not near genes chr3R_8_13500001 chr3R_13500001 RAL-109_125b 3112 chr3R 13517182 13517253 chr3R 13520049 13520118 jockey 7 2862 4.0 0.0 2.0 2.3 2936 chr3R 13517182 intergenic not near genes chr3R 13518650 intergenic not near genes chr3R 13520118 intergenic not near genes chr3R_7_13515001 chr3R_13515001 RAL-109_125b 3113 chr3R 13529776 13529830 chr3R 13530008 13530078 18 244 4.5 0.0 2.2 5.6 302 chr3R 13529776 intergenic CG42778 - chr3R 13529927 intergenic not near genes chr3R 13530078 intergenic not near genes chr3R_18_13525001 chr3R_13525001 RAL-109_125b 3114 chr3R 13539574 13539596 chr3R 13539705 13539727 5 129 13.5 7.0 10.2 0.4 153 chr3R 13539574 intergenic not near genes chr3R 13539650 intergenic not near genes chr3R 13539727 intergenic not near genes chr3R_5_13535001 chr3R_13535001 RAL-109_125b 3115 chr3R 13558015 13558051 chr3R 13558273 13558301 11 255 10.5 8.0 9.2 1.1 286 chr3R 13558015 intergenic not near genes chr3R 13558158 intergenic not near genes chr3R 13558301 intergenic not near genes chr3R_11_13555001 chr3R_13555001 RAL-109_125b 3116 chr3R 13599168 13599240 chr3R 13599329 13599390 20 160 5.0 7.0 6.0 2.9 222 chr3R 13599168 intergenic not near genes chr3R 13599279 intergenic not near genes chr3R 13599390 intergenic not near genes chr3R_20_13595001 chr3R_13595001 RAL-109_125b 3117 chr3R 13603016 13603077 chr3R 13603146 13603218 22 138 8.0 6.0 7.0 2.8 202 chr3R 13603016 intergenic not near genes chr3R 13603117 intergenic not near genes chr3R 13603218 intergenic not near genes chr3R_22_13600001 chr3R_13600001 RAL-109_125b 3118 chr3R 13609509 13609576 chr3R 13609653 13609720 11 148 0.0 0.0 0.0 11.0 211 chr3R 13609509 intergenic CG9759 - chr3R 13609614 intergenic CG9759 - chr3R 13609720 intergenic CG9759 - chr3R_11_13605001 chr3R_13605001 RAL-109_125b 3119 chr3R 13625651 13625708 chr3R 13625782 13625839 8 128 7.5 5.5 6.5 1.1 188 chr3R 13625651 intergenic not near genes chr3R 13625745 intergenic not near genes chr3R 13625839 intergenic not near genes chr3R_8_13625001 chr3R_13625001 RAL-109_125b 3120 chr3R 13672917 13672969 chr3R 13673017 13673097 15 121 8.0 11.5 9.8 1.4 180 chr3R 13672917 intron Task6 - chr3R 13673007 intron Task6 - chr3R 13673097 intron Task6 - chr3R_15_13670001 chr3R_13670001 RAL-109_125b 3121 chr3R 13693028 13693028 chr3R 21907534 21907536 11 8214507 32.5 36.0 34.2 0.3 8214508 chr3R 13693028 3` UTR flfl + chr3R 17800282 exon CG17803 - chr3R 21907536 intergenic CG6678 + chr3R_11_17800001 chr3R_17800001 RAL-109_125b 3122 chr3R 13712571 13712625 chr3R 13712718 13712771 7 141 10.5 4.0 7.2 0.9 200 chr3R 13712571 3` UTR CR34044 - chr3R 13712671 3` UTR CR34044 - chr3R 13712771 3` UTR CR34044 - chr3R_7_13710001 chr3R_13710001 RAL-109_125b 3123 chr3R 13761989 13762063 chr3R 13762364 13762438 37 375 5.5 8.0 6.8 4.7 449 chr3R 13761989 intron CG34383 + chr3R 13762214 intron CG34383 + chr3R 13762438 intron CG34383 + chr3R_37_13760001 chr3R_13760001 RAL-109_125b 3124 chr3R 13782015 13782084 chr3R 13782146 13782197 26 128 6.5 12.5 9.5 2.5 182 chr3R 13782015 exon CG9286 + chr3R 13782106 intergenic CG9286 +,Dip-B + chr3R 13782197 intergenic Dip-B +,CG9286 + chr3R_26_13780001 chr3R_13780001 RAL-109_125b 3125 chr3R 13803857 13803863 chr3R 13804121 13804127 4 264 14.5 0.0 7.2 0.5 270 chr3R 13803857 intergenic not near genes chr3R 13803992 intergenic not near genes chr3R 13804127 intergenic not near genes chr3R_4_13800001 chr3R_13800001 RAL-109_125b 3126 chr3R 13828799 13828872 chr3R 13828935 13829008 11 135 5.5 2.0 3.8 2.3 209 chr3R 13828799 intergenic CR43300 + chr3R 13828904 intergenic CR43300 + chr3R 13829008 intergenic not near genes chr3R_11_13825001 chr3R_13825001 RAL-109_125b 3127 chr3R 13830721 13830777 chr3R 13830920 13830991 23 210 6.0 7.0 6.5 3.1 270 chr3R 13830721 intergenic not near genes chr3R 13830856 intergenic not near genes chr3R 13830991 intergenic not near genes chr3R_23_13830001 chr3R_13830001 RAL-109_125b 3128 chr3R 13863640 13863668 chr3R 13863771 13863806 14 136 13.5 7.0 10.2 1.2 166 chr3R 13863640 intergenic not near genes chr3R 13863723 intergenic not near genes chr3R 13863806 intergenic not near genes chr3R_14_13860001 chr3R_13860001 RAL-109_125b 3129 chr3R 13863669 13863702 chr3R 13863768 13863803 13 129 9.5 7.5 8.5 1.4 134 chr3R 13863669 intergenic not near genes chr3R 13863736 intergenic not near genes chr3R 13863803 intergenic not near genes chr3R_13_13860001 chr3R_13860001 RAL-109_125b 3130 chr3R 13952604 13952620 chr3R 13952736 13952742 5 130 7.5 15.0 11.2 0.4 138 chr3R 13952604 intergenic not near genes chr3R 13952673 intergenic not near genes chr3R 13952742 intergenic not near genes chr3R_5_13950001 chr3R_13950001 RAL-109_125b 3131 chr3R 13974470 13974495 chr3R 13974597 13974597 9 124 6.5 9.0 7.8 1.0 127 chr3R 13974470 intron,5` UTR rdx -,CR43460 + chr3R 13974534 intron,5` UTR rdx -,CR43460 + chr3R 13974597 intron,5` UTR rdx -,CR43460 + chr3R_9_13970001 chr3R_13970001 RAL-109_125b 3132 chr3R 13975336 13975403 chr3R 13975466 13975533 29 130 9.0 10.5 9.8 2.7 197 chr3R 13975336 intron rdx - chr3R 13975434 intron rdx - chr3R 13975533 intron rdx - chr3R_29_13975001 chr3R_13975001 RAL-109_125b 3133 chr3R 14021603 14021677 chr3R 14023470 14023516 S-element 25 1865 7.5 7.5 7.5 2.9 1913 chr3R 14021603 intron rdx - chr3R 14022560 intron rdx - chr3R 14023516 intron rdx - chr3R_25_14020001 chr3R_14020001 RAL-109_125b 3134 chr3R 14037544 14037589 chr3R 14037667 14037713 14 125 13.5 8.0 10.8 1.2 169 chr3R 14037544 intergenic not near genes chr3R 14037628 intergenic not near genes chr3R 14037713 intergenic not near genes chr3R_14_14035001 chr3R_14035001 RAL-109_125b 3135 chr3R 14047722 14047771 chr3R 14047863 14047912 23 139 10.0 6.5 8.2 2.5 190 chr3R 14047722 intergenic not near genes chr3R 14047817 intergenic not near genes chr3R 14047912 intergenic not near genes chr3R_23_14045001 chr3R_14045001 RAL-109_125b 3136 chr3R 14058078 14058144 chr3R 14058248 14058314 37 170 5.0 6.0 5.5 5.7 236 chr3R 14058078 5` UTR foxo + chr3R 14058196 intron foxo + chr3R 14058314 intron foxo + chr3R_37_14055001 chr3R_14055001 RAL-109_125b 3137 chr3R 14067093 14067152 chr3R 14067222 14067281 20 127 5.5 5.0 5.2 3.2 188 chr3R 14067093 exon foxo + chr3R 14067187 intron foxo + chr3R 14067281 intron foxo + chr3R_20_14065001 chr3R_14065001 RAL-109_125b 3138 chr3R 14079781 14079848 chr3R 14079913 14079980 13 132 3.0 0.0 1.5 5.2 199 chr3R 14079781 intron foxo + chr3R 14079880 intron foxo + chr3R 14079980 intron foxo + chr3R_13_14075001 chr3R_14075001 RAL-109_125b 3139 chr3R 14083366 14083412 chr3R 14083517 14083527 13 146 19.0 0.0 9.5 1.2 161 chr3R 14083366 intron foxo + chr3R 14083446 intron foxo + chr3R 14083527 intron foxo + chr3R_13_14080001 chr3R_14080001 RAL-109_125b 3140 chr3R 14089539 14089540 chr3R 14089677 14089678 4 138 7.0 0.0 3.5 0.9 139 chr3R 14089539 5` UTR Npc2b + chr3R 14089608 intron Npc2b + chr3R 14089678 intron Npc2b + chr3R_4_14085001 chr3R_14085001 RAL-109_125b 3141 chr3R 14109040 14109102 chr3R 14109171 14109233 21 131 6.5 6.0 6.2 2.9 193 chr3R 14109040 intergenic CR44237 -,Or88a + chr3R 14109136 intergenic CR44237 -,Or88a + chr3R 14109233 intergenic CR44237 -,Or88a + chr3R_21_14105001 chr3R_14105001 RAL-109_125b 3142 chr3R 14136141 14136212 chr3R 14136267 14136356 5 140 1.0 1.0 1.0 2.5 215 chr3R 14136141 intergenic not near genes chr3R 14136248 intergenic not near genes chr3R 14136356 intergenic not near genes chr3R_5_14135001 chr3R_14135001 RAL-109_125b 3143 chr3R 14163616 14163619 chr3R 14163742 14163745 5 126 16.0 8.0 12.0 0.4 129 chr3R 14163616 3` UTR CG3199 + chr3R 14163680 intergenic CG3199 + chr3R 14163745 intergenic CG3199 + chr3R_5_14160001 chr3R_14160001 RAL-109_125b 3144 chr3R 14163620 14163683 chr3R 14163736 14163809 26 126 7.0 8.5 7.8 3.0 189 chr3R 14163620 3` UTR CG3199 + chr3R 14163714 intergenic CG3199 + chr3R 14163809 intergenic CG3199 + chr3R_26_14160001 chr3R_14160001 RAL-109_125b 3145 chr3R 14180764 14180843 chr3R 14185579 14185658 F-element 13 4814 7.0 5.5 6.2 1.8 4894 chr3R 14180764 intron Dop1R1 - chr3R 14183211 intron Dop1R1 - chr3R 14185658 intron Dop1R1 - chr3R_13_14180001 chr3R_14180001 RAL-109_125b 3146 chr3R 14194423 14194458 chr3R 14203596 14203633 roo 9 9171 7.5 5.5 6.5 1.2 9210 chr3R 14194423 intron Dop1R1 - chr3R 14199028 intron Dop1R1 - chr3R 14203633 intron Dop1R1 - chr3R_9_14195001 chr3R_14195001 RAL-109_125b 3147 chr3R 14236910 14236933 chr3R 14244454 14244477 Idefix 4 7543 7.5 6.5 7.0 0.5 7567 chr3R 14236910 exon CG43291 - chr3R 14240694 intron CG43291 - chr3R 14244477 exon CG43291 - chr3R_4_14240001 chr3R_14240001 RAL-109_125b 3148 chr3R 14246349 14246396 chr3R 14247895 14247922 jockey 8 1536 15.0 10.0 12.5 0.6 1573 chr3R 14246349 intergenic not near genes chr3R 14247136 intergenic not near genes chr3R 14247922 intergenic not near genes chr3R_8_14245001 chr3R_14245001 RAL-109_125b 3149 chr3R 14256731 14256768 chr3R 14256867 14256883 15 134 8.5 15.0 11.8 1.2 152 chr3R 14256731 intron,exon Aats-met -,CG43179 + chr3R 14256807 intron,3` UTR Aats-met -,CG43179 + chr3R 14256883 intron,3` UTR Aats-met -,CG43179 + chr3R_15_14255001 chr3R_14255001 RAL-109_125b 3150 chr3R 14319030 14319091 chr3R 14319147 14319193 23 127 9.0 11.5 10.2 2.1 163 chr3R 14319030 3` UTR pr-set7 + chr3R 14319112 3` UTR pr-set7 + chr3R 14319193 3` UTR pr-set7 + chr3R_23_14315001 chr3R_14315001 RAL-109_125b 3151 chr3R 14327653 14327721 chr3R 14327785 14327853 28 128 8.5 11.0 9.8 2.6 200 chr3R 14327653 3` UTR CG3321 + chr3R 14327753 intergenic CG3321 +,spn-B + chr3R 14327853 intergenic CG3321 +,spn-B + chr3R_28_14325001 chr3R_14325001 RAL-109_125b 3152 chr3R 14356545 14356557 chr3R 14356680 14356692 4 134 2.0 7.0 4.5 0.7 147 chr3R 14356545 intron NK7.1 - chr3R 14356618 intron NK7.1 - chr3R 14356692 intron NK7.1 - chr3R_4_14355001 chr3R_14355001 RAL-109_125b 3153 chr3R 14356561 14356615 chr3R 14356675 14356717 22 112 1.0 6.0 3.5 4.9 156 chr3R 14356561 intron NK7.1 - chr3R 14356639 intron NK7.1 - chr3R 14356717 intron NK7.1 - chr3R_22_14355001 chr3R_14355001 RAL-109_125b 3154 chr3R 14364026 14364084 chr3R 14364138 14364206 20 112 11.5 11.5 11.5 1.6 180 chr3R 14364026 intron NK7.1 - chr3R 14364116 intron NK7.1 - chr3R 14364206 intron NK7.1 - chr3R_20_14360001 chr3R_14360001 RAL-109_125b 3155 chr3R 14504975 14504987 chr3R 14505100 14505113 roo 5 124 13.5 17.0 15.2 0.3 138 chr3R 14504975 intron CR44177 + chr3R 14505044 intron CR44177 + chr3R 14505113 intron CR44177 + chr3R_5_14505001 chr3R_14505001 RAL-109_125b 3156 chr3R 14533519 14533595 chr3R 14533658 14533727 5 137 1.0 3.0 2.0 1.7 208 chr3R 14533519 intron Pde6 - chr3R 14533623 intron Pde6 - chr3R 14533727 intron Pde6 - chr3R_5_14530001 chr3R_14530001 RAL-109_125b 3157 chr3R 14548530 14548551 chr3R 14548668 14548677 6 129 18.0 9.5 13.8 0.4 147 chr3R 14548530 intron Pde6 - chr3R 14548604 intron Pde6 - chr3R 14548677 intron Pde6 - chr3R_6_14545001 chr3R_14545001 RAL-109_125b 3158 chr3R 14548552 14548600 chr3R 14548662 14548738 19 118 9.0 7.0 8.0 2.1 186 chr3R 14548552 intron Pde6 - chr3R 14548645 intron Pde6 - chr3R 14548738 intron Pde6 - chr3R_19_14545001 chr3R_14545001 RAL-109_125b 3159 chr3R 14563977 14563991 chr3R 14564127 14564141 5 150 0.0 8.5 4.2 1.0 164 chr3R 14563977 intergenic CG8087 - chr3R 14564059 intergenic CG8087 - chr3R 14564141 intergenic CG8087 - chr3R_5_14560001 chr3R_14560001 RAL-109_125b 3160 chr3R 14577914 14577976 chr3R 14578080 14578142 28 165 6.0 8.0 7.0 3.5 228 chr3R 14577914 intron stumps + chr3R 14578028 intron stumps + chr3R 14578142 intron stumps + chr3R_28_14575001 chr3R_14575001 RAL-109_125b 3161 chr3R 14608426 14608475 chr3R 14608568 14608617 16 142 4.5 10.0 7.2 2.0 191 chr3R 14608426 intergenic stumps + chr3R 14608522 intergenic stumps + chr3R 14608617 intergenic not near genes chr3R_16_14605001 chr3R_14605001 RAL-109_125b 3162 chr3R 14824489 14824566 chr3R 14824633 14824702 13 140 3.5 0.0 1.8 4.6 213 chr3R 14824489 intron btsz - chr3R 14824596 intron btsz - chr3R 14824702 intron btsz - chr3R_13_14820001 chr3R_14820001 RAL-109_125b 3163 chr3R 14840907 14840916 chr3R 14841038 14841052 6 134 20.0 7.5 13.8 0.4 145 chr3R 14840907 intron btsz - chr3R 14840980 intron btsz - chr3R 14841052 intron btsz - chr3R_6_14840001 chr3R_14840001 RAL-109_125b 3164 chr3R 14840920 14840973 chr3R 14841031 14841089 21 122 10.5 6.5 8.5 2.2 169 chr3R 14840920 intron btsz - chr3R 14841004 intron btsz - chr3R 14841089 intron btsz - chr3R_21_14840001 chr3R_14840001 RAL-109_125b 3165 chr3R 14898428 14898498 chr3R 14898598 14898668 26 168 3.5 5.5 4.5 4.7 240 chr3R 14898428 intergenic Nup93-2 -,CG3817 + chr3R 14898548 intergenic Nup93-2 -,CG3817 + chr3R 14898668 intergenic CG3817 +,Nup93-2 - chr3R_26_14895001 chr3R_14895001 RAL-109_125b 3166 chr3R 14911515 14911598 chr3R 14911671 14911754 26 146 1.0 3.0 2.0 8.7 239 chr3R 14911515 intergenic not near genes chr3R 14911634 intergenic not near genes chr3R 14911754 intergenic not near genes chr3R_26_14910001 chr3R_14910001 RAL-109_125b 3167 chr3R 14944867 14944875 chr3R 14944988 14944997 6 128 10.5 13.0 11.8 0.5 130 chr3R 14944867 intergenic not near genes chr3R 14944932 intergenic not near genes chr3R 14944997 intergenic not near genes chr3R_6_14940001 chr3R_14940001 RAL-109_125b 3168 chr3R 14944876 14944887 chr3R 14944984 14945008 4 121 8.5 11.5 10.0 0.4 132 chr3R 14944876 intergenic not near genes chr3R 14944942 intergenic not near genes chr3R 14945008 intergenic not near genes chr3R_4_14940001 chr3R_14940001 RAL-109_125b 3169 chr3R 15026284 15026342 chr3R 15026420 15026478 17 134 6.5 8.0 7.2 2.1 194 chr3R 15026284 intergenic not near genes chr3R 15026381 intergenic not near genes chr3R 15026478 intergenic not near genes chr3R_17_15025001 chr3R_15025001 RAL-109_125b 3170 chr3R 15041399 15041445 chr3R 15045217 15045263 Doc 18 3818 2.5 10.0 6.2 2.5 3864 chr3R 15041399 intergenic not near genes chr3R 15043331 intergenic not near genes chr3R 15045263 intergenic not near genes chr3R_18_15040001 chr3R_15040001 RAL-109_125b 3171 chr3R 15078290 15078367 chr3R 15078424 15078497 28 128 6.5 6.5 6.5 3.7 207 chr3R 15078290 intergenic CG6974 - chr3R 15078394 intergenic CG6974 - chr3R 15078497 intergenic CG6974 - chr3R_28_15075001 chr3R_15075001 RAL-109_125b 3172 chr3R 15079773 15079833 chr3R 15080047 15080117 pogo 6 287 9.5 4.5 7.0 0.8 344 chr3R 15079773 3` UTR CG6966 - chr3R 15079945 3` UTR CG6966 - chr3R 15080117 3` UTR CG6966 - chr3R_6_15075001 chr3R_15075001 RAL-109_125b 3173 chr3R 15087384 15087428 chr3R 15087484 15087553 16 118 8.0 7.0 7.5 1.9 169 chr3R 15087384 intron CG6966 - chr3R 15087468 intron CG6966 - chr3R 15087553 intron CG6966 - chr3R_16_15085001 chr3R_15085001 RAL-109_125b 3174 chr3R 15088052 15088103 chr3R 15088193 15088241 13 143 6.5 9.0 7.8 1.5 189 chr3R 15088052 intron CG6966 - chr3R 15088146 intron CG6966 - chr3R 15088241 intron CG6966 - chr3R_13_15085001 chr3R_15085001 RAL-109_125b 3175 chr3R 15102446 15102510 chr3R 15109753 15109817 412 29 7306 10.0 5.5 7.8 3.3 7371 chr3R 15102446 intron CG42788 - chr3R 15106132 intron CG42788 - chr3R 15109817 intron CG42788 - chr3R_29_15105001 chr3R_15105001 RAL-109_125b 3176 chr3R 15114866 15114899 chr3R 15114994 15115027 13 127 11.5 7.5 9.5 1.2 161 chr3R 15114866 intron CG42788 - chr3R 15114946 intron CG42788 - chr3R 15115027 intron CG42788 - chr3R_13_15110001 chr3R_15110001 RAL-109_125b 3177 chr3R 15132028 15132031 chr3R 15135138 15135141 Juan 4 3110 42.0 29.5 35.8 0.1 3113 chr3R 15132028 intergenic CG42788 - chr3R 15133584 intergenic not near genes chr3R 15135141 3` UTR CG6912 - chr3R_4_15130001 chr3R_15130001 RAL-109_125b 3178 chr3R 15132041 15132068 chr3R 15135134 15135178 Juan 29 3107 25.5 29.0 27.2 1.0 3137 chr3R 15132041 intergenic CG42788 - chr3R 15133610 intergenic not near genes chr3R 15135178 3` UTR CG6912 - chr3R_29_15130001 chr3R_15130001 RAL-109_125b 3179 chr3R 15130868 15130898 chr3R 15141191 15141238 7 10317 40.5 53.5 47.0 0.1 10370 chr3R 15130868 intron CG42788 - chr3R 15136053 exon CG6912 - chr3R 15141238 exon CG3987 + chr3R_7_15135001 chr3R_15135001 RAL-109_125b 3180 chr3R 15145536 15145553 chr3R 15145675 15145692 7 139 9.0 5.5 7.2 0.9 156 chr3R 15145536 intron GlyS - chr3R 15145614 intron GlyS - chr3R 15145692 intron GlyS - chr3R_7_15145001 chr3R_15145001 RAL-109_125b 3181 chr3R 15146483 15146548 chr3R 15146632 15146697 23 145 4.0 9.0 6.5 3.1 214 chr3R 15146483 intron GlyS - chr3R 15146590 intron GlyS - chr3R 15146697 intron GlyS - chr3R_23_15145001 chr3R_15145001 RAL-109_125b 3182 chr3R 15155723 15155799 chr3R 15156085 15156104 40 358 11.0 7.0 9.0 4.0 381 chr3R 15155723 intron Gyc88E + chr3R 15155914 intron Gyc88E + chr3R 15156104 intron Gyc88E + chr3R_40_15155001 chr3R_15155001 RAL-109_125b 3183 chr3R 15162508 15162570 chr3R 15167324 15167361 F-element 28 4813 10.0 9.0 9.5 2.7 4853 chr3R 15162508 intron Gyc88E + chr3R 15164934 intron Gyc88E + chr3R 15167361 intron Gyc88E + chr3R_28_15160001 chr3R_15160001 RAL-109_125b 3184 chr3R 15286987 15286989 chr3R 21907534 21907535 6 6620547 26.0 36.0 31.0 0.2 6620548 chr3R 15286987 intron Tm1 + chr3R 18597261 intron,exon qin +,CG14304 - chr3R 21907535 intergenic CG6678 + chr3R_6_18595001 chr3R_18595001 RAL-109_125b 3185 chr3R 15406109 15406120 chr3R 15406235 15406251 7 130 12.5 12.0 12.2 0.5 142 chr3R 15406109 intron CG6125 - chr3R 15406180 intron CG6125 - chr3R 15406251 intron CG6125 - chr3R_7_15405001 chr3R_15405001 RAL-109_125b 3186 chr3R 15406126 15406164 chr3R 15406231 15406285 14 125 3.5 10.5 7.0 1.8 159 chr3R 15406126 intron CG6125 - chr3R 15406206 intron CG6125 - chr3R 15406285 intron CG6125 - chr3R_14_15405001 chr3R_15405001 RAL-109_125b 3187 chr3R 15407826 15407900 chr3R 15408092 15408149 24 262 8.0 6.0 7.0 3.0 323 chr3R 15407826 intergenic not near genes chr3R 15407988 intergenic not near genes chr3R 15408149 intergenic not near genes chr3R_24_15405001 chr3R_15405001 RAL-109_125b 3188 chr3R 15416213 15416232 chr3R 15416339 15416361 11 128 18.0 11.5 14.8 0.7 148 chr3R 15416213 3` UTR Atx2 + chr3R 15416287 3` UTR Atx2 + chr3R 15416361 3` UTR Atx2 + chr3R_11_15415001 chr3R_15415001 RAL-109_125b 3189 chr3R 15416233 15416268 chr3R 15416335 15416398 19 125 7.5 11.0 9.2 1.9 165 chr3R 15416233 3` UTR Atx2 + chr3R 15416316 3` UTR Atx2 + chr3R 15416398 3` UTR Atx2 + chr3R_19_15415001 chr3R_15415001 RAL-109_125b 3190 chr3R 15445860 15445904 chr3R 15445995 15446039 21 134 14.0 1.0 7.5 2.5 179 chr3R 15445860 exon AdamTS-A - chr3R 15445950 intron AdamTS-A - chr3R 15446039 intron AdamTS-A - chr3R_21_15445001 chr3R_15445001 RAL-109_125b 3191 chr3R 15601123 15601143 chr3R 15608695 15608715 412 8 7571 22.0 9.0 15.5 0.5 7592 chr3R 15601123 intergenic not near genes chr3R 15604919 intergenic not near genes chr3R 15608715 intergenic not near genes chr3R_8_15600001 chr3R_15600001 RAL-109_125b 3192 chr3R 15601145 15601183 chr3R 15608692 15608755 412 10 7569 12.5 8.0 10.2 0.9 7610 chr3R 15601145 intergenic not near genes chr3R 15604950 intergenic not near genes chr3R 15608755 intergenic not near genes chr3R_10_15600001 chr3R_15600001 RAL-109_125b 3193 chr3R 15618704 15618750 chr3R 15626212 15626274 blood 21 7518 9.5 10.0 9.8 1.9 7570 chr3R 15618704 intergenic not near genes chr3R 15622489 intergenic not near genes chr3R 15626274 intergenic not near genes chr3R_21_15620001 chr3R_15620001 RAL-109_125b 3194 chr3R 15646745 15646796 chr3R 15646878 15646929 10 133 8.0 10.0 9.0 1.0 184 chr3R 15646745 intergenic not near genes chr3R 15646837 intergenic not near genes chr3R 15646929 intergenic not near genes chr3R_10_15645001 chr3R_15645001 RAL-109_125b 3195 chr3R 15691131 15691305 chr3R 15691286 15691442 21 146 0.0 0.0 0.0 21.0 311 chr3R 15691131 intergenic not near genes chr3R 15691286 intergenic not near genes chr3R 15691442 intergenic not near genes chr3R_21_15690001 chr3R_15690001 RAL-109_125b 3196 chr3R 15734147 15734190 chr3R 15734288 15734300 11 134 8.5 12.5 10.5 1.0 153 chr3R 15734147 intergenic not near genes chr3R 15734224 intergenic not near genes chr3R 15734300 intergenic not near genes chr3R_11_15730001 chr3R_15730001 RAL-109_125b 3197 chr3R 15735193 15735221 chr3R 15739963 15739991 F-element 8 4770 9.5 8.5 9.0 0.8 4798 chr3R 15735193 intergenic not near genes chr3R 15737592 intergenic not near genes chr3R 15739991 intergenic not near genes chr3R_8_15735001 chr3R_15735001 RAL-109_125b 3198 chr3R 15808496 15808507 chr3R 15808642 15808643 4 144 24.5 8.5 16.5 0.2 147 chr3R 15808496 intron alpha-Man-IIb + chr3R 15808570 intron alpha-Man-IIb + chr3R 15808643 intron alpha-Man-IIb + chr3R_4_15805001 chr3R_15805001 RAL-109_125b 3199 chr3R 15808508 15808571 chr3R 15808637 15808695 21 137 8.0 7.0 7.5 2.5 187 chr3R 15808508 intron alpha-Man-IIb + chr3R 15808602 intron alpha-Man-IIb + chr3R 15808695 intron alpha-Man-IIb + chr3R_21_15805001 chr3R_15805001 RAL-109_125b 3200 chr3R 15844056 15844117 chr3R 15844204 15844265 25 148 6.0 7.0 6.5 3.3 209 chr3R 15844056 exon spn-E + chr3R 15844160 3` UTR spn-E + chr3R 15844265 3` UTR spn-E + chr3R_25_15840001 chr3R_15840001 RAL-109_125b 3201 chr3R 15878042 15878099 chr3R 15878180 15878237 33 136 7.5 6.5 7.0 4.1 195 chr3R 15878042 intergenic not near genes chr3R 15878140 intergenic not near genes chr3R 15878237 intergenic not near genes chr3R_33_15875001 chr3R_15875001 RAL-109_125b 3202 chr3R 15892608 15892678 chr3R 15892739 15892809 27 129 9.5 7.0 8.2 2.9 201 chr3R 15892608 intron CG14877 - chr3R 15892708 intron CG14877 - chr3R 15892809 intron CG14877 - chr3R_27_15890001 chr3R_15890001 RAL-109_125b 3203 chr3R 15942006 15942081 chr3R 15942808 15942870 27 795 6.5 10.0 8.2 2.9 864 chr3R 15942006 intron Sap47 + chr3R 15942438 intron Sap47 + chr3R 15942870 intron Sap47 + chr3R_27_15940001 chr3R_15940001 RAL-109_125b 3204 chr3R 16011005 16011063 chr3R 16011162 16011216 23 163 8.0 0.0 4.0 4.6 211 chr3R 16011005 intron GATAe + chr3R 16011110 intron GATAe + chr3R 16011216 intron GATAe + chr3R_23_16010001 chr3R_16010001 RAL-109_125b 3205 chr3R 16033366 16033430 chr3R 16033497 16033561 17 131 7.5 6.0 6.8 2.2 195 chr3R 16033366 intron pnr + chr3R 16033464 intron pnr + chr3R 16033561 intron pnr + chr3R_17_16030001 chr3R_16030001 RAL-109_125b 3206 chr3R 16201461 16201517 chr3R 16201694 16201750 8 230 30.5 33.0 31.8 0.2 289 chr3R 16201461 intron CG6126 - chr3R 16201606 intron CG6126 - chr3R 16201750 intron CG6126 - chr3R_8_16200001 chr3R_16200001 RAL-109_125b 3207 chr3R 16260768 16260795 chr3R 16260899 16260926 12 131 0.5 7.5 4.0 2.4 158 chr3R 16260768 intergenic tara + chr3R 16260847 intergenic not near genes chr3R 16260926 intergenic bor - chr3R_12_16260001 chr3R_16260001 RAL-109_125b 3208 chr3R 16298873 16298901 chr3R 16299008 16299036 11 134 10.5 19.5 15.0 0.7 163 chr3R 16298873 intron gish + chr3R 16298954 intron gish + chr3R 16299036 intron gish + chr3R_11_16295001 chr3R_16295001 RAL-109_125b 3209 chr3R 16374261 16374324 chr3R 16374422 16374491 21 166 6.0 7.0 6.5 2.8 230 chr3R 16374261 intergenic ss - chr3R 16374376 intergenic ss - chr3R 16374491 3` UTR ss - chr3R_21_16370001 chr3R_16370001 RAL-109_125b 3210 chr3R 16430536 16430598 chr3R 16430655 16430663 29 127 8.5 10.0 9.2 2.8 127 chr3R 16430536 intergenic CG31279 + chr3R 16430600 intergenic CG31279 + chr3R 16430663 intergenic CG31279 + chr3R_29_16430001 chr3R_16430001 RAL-109_125b 3211 chr3R 16471175 16471250 chr3R 16471321 16471398 26 146 6.5 5.5 6.0 3.7 223 chr3R 16471175 exon CSN5 + chr3R 16471286 3` UTR CSN5 + chr3R 16471398 3` UTR CSN5 + chr3R_26_16470001 chr3R_16470001 RAL-109_125b 3212 chr3R 16582865 16582876 chr3R 16582992 16583005 4 128 17.5 8.5 13.0 0.3 140 chr3R 16582865 intron Scp2 - chr3R 16582935 intron Scp2 - chr3R 16583005 intron Scp2 - chr3R_4_16580001 chr3R_16580001 RAL-109_125b 3213 chr3R 16582879 16582915 chr3R 16582989 16583044 12 119 9.5 8.5 9.0 1.2 165 chr3R 16582879 intron Scp2 - chr3R 16582962 intron Scp2 - chr3R 16583044 intron Scp2 - chr3R_12_16580001 chr3R_16580001 RAL-109_125b 3214 chr3R 16620337 16620355 chr3R 16620527 16620545 8 189 0.5 8.5 4.5 1.5 208 chr3R 16620337 intergenic CG14893 +,CG17560 + chr3R 16620441 intergenic CG14893 + chr3R 16620545 intergenic CG14893 + chr3R_8_16620001 chr3R_16620001 RAL-109_125b 3215 chr3R 16620356 16620403 chr3R 16620526 16620593 14 185 0.5 8.5 4.5 2.5 237 chr3R 16620356 intergenic CG14893 +,CG17560 + chr3R 16620474 intergenic CG14893 + chr3R 16620593 intergenic CG14893 + chr3R_14_16620001 chr3R_16620001 RAL-109_125b 3216 chr3R 16633648 16633677 chr3R 16633797 16633827 9 149 10.5 13.0 11.8 0.7 179 chr3R 16633648 intron Fas1 + chr3R 16633738 intron Fas1 + chr3R 16633827 intron Fas1 + chr3R_9_16630001 chr3R_16630001 RAL-109_125b 3217 chr3R 16667035 16667102 chr3R 16667167 16667230 14 127 9.0 7.0 8.0 1.6 195 chr3R 16667035 intron Ubx - chr3R 16667132 intron Ubx - chr3R 16667230 intron Ubx - chr3R_14_16665001 chr3R_16665001 RAL-109_125b 3218 chr3R 16671470 16671475 chr3R 16671598 16671604 4 131 16.5 7.0 11.8 0.3 134 chr3R 16671470 intron Ubx - chr3R 16671537 intron Ubx - chr3R 16671604 intron Ubx - chr3R_4_16670001 chr3R_16670001 RAL-109_125b 3219 chr3R 16671485 16671537 chr3R 16671590 16671635 21 122 6.0 7.0 6.5 2.8 150 chr3R 16671485 intron Ubx - chr3R 16671560 intron Ubx - chr3R 16671635 intron Ubx - chr3R_21_16670001 chr3R_16670001 RAL-109_125b 3220 chr3R 16676475 16676483 chr3R 16676604 16676612 6 128 8.5 20.5 14.5 0.4 137 chr3R 16676475 intron Ubx - chr3R 16676544 intron Ubx - chr3R 16676612 intron Ubx - chr3R_6_16675001 chr3R_16675001 RAL-109_125b 3221 chr3R 16676484 16676505 chr3R 16676558 16676588 7 113 7.0 11.0 9.0 0.7 104 chr3R 16676484 intron Ubx - chr3R 16676536 intron Ubx - chr3R 16676588 intron Ubx - chr3R_7_16675001 chr3R_16675001 RAL-109_125b 3222 chr3R 16732119 16732175 chr3R 16732265 16732321 16 146 1.0 0.5 0.8 8.9 202 chr3R 16732119 intron Ubx - chr3R 16732220 intron Ubx - chr3R 16732321 intron Ubx - chr3R_16_16730001 chr3R_16730001 RAL-109_125b 3223 chr3R 16741575 16741618 chr3R 16741739 16741812 8 187 3.5 3.5 3.5 1.8 237 chr3R 16741575 intergenic not near genes chr3R 16741694 intergenic bxd - chr3R 16741812 intergenic bxd - chr3R_8_16740001 chr3R_16740001 RAL-109_125b 3224 chr3R 16756278 16756299 chr3R 16762518 16762540 diver 4 6239 13.0 2.5 7.8 0.5 6262 chr3R 16756278 intron bxd - chr3R 16759409 intron bxd - chr3R 16762540 intron bxd - chr3R_4_16755001 chr3R_16755001 RAL-109_125b 3225 chr3R 16756301 16756322 chr3R 16762516 16762533 diver 8 6228 9.0 2.5 5.8 1.2 6232 chr3R 16756301 intron bxd - chr3R 16759417 intron bxd - chr3R 16762533 intron bxd - chr3R_8_16755001 chr3R_16755001 RAL-109_125b 3226 chr3R 16756325 16756348 chr3R 16762511 16762526 diver 7 6215 6.0 2.0 4.0 1.4 6201 chr3R 16756325 intron bxd - chr3R 16759426 intron bxd - chr3R 16762526 intron bxd - chr3R_7_16755001 chr3R_16755001 RAL-109_125b 3227 chr3R 16836922 16836984 chr3R 16837301 16837344 10 375 10.0 6.5 8.2 1.1 422 chr3R 16836922 intron iab-8 - chr3R 16837133 intron iab-8 - chr3R 16837344 intron iab-8 - chr3R_10_16835001 chr3R_16835001 RAL-109_125b 3228 chr3R 16946687 16946719 chr3R 16946816 16946827 11 125 1.0 8.0 4.5 2.0 140 chr3R 16946687 intron Abd-B - chr3R 16946757 intron Abd-B - chr3R 16946827 intron Abd-B - chr3R_11_16945001 chr3R_16945001 RAL-109_125b 3229 chr3R 16946727 16946754 chr3R 16946806 16946883 13 125 1.0 5.5 3.2 3.1 156 chr3R 16946727 intron Abd-B - chr3R 16946805 intron Abd-B - chr3R 16946883 intron Abd-B - chr3R_13_16945001 chr3R_16945001 RAL-109_125b 3230 chr3R 17101094 17101130 chr3R 17101224 17101260 15 130 7.5 0.0 3.8 3.1 166 chr3R 17101094 intron cher - chr3R 17101177 intron cher - chr3R 17101260 intron cher - chr3R_15_17100001 chr3R_17100001 RAL-109_125b 3231 chr3R 17175901 17175971 chr3R 17176030 17176100 24 127 7.0 5.0 6.0 3.4 199 chr3R 17175901 intron Mur89F - chr3R 17176000 intron Mur89F - chr3R 17176100 intron Mur89F - chr3R_24_17175001 chr3R_17175001 RAL-109_125b 3232 chr3R 17184687 17184752 chr3R 17184812 17184878 21 126 5.0 6.5 5.8 3.1 191 chr3R 17184687 intron Mur89F - chr3R 17184782 intron Mur89F - chr3R 17184878 intron Mur89F - chr3R_21_17180001 chr3R_17180001 RAL-109_125b 3233 chr3R 17209666 17209685 chr3R 17209803 17209823 7 136 12.0 10.0 11.0 0.6 157 chr3R 17209666 intergenic not near genes chr3R 17209744 intergenic not near genes chr3R 17209823 intergenic not near genes chr3R_7_17205001 chr3R_17205001 RAL-109_125b 3234 chr3R 17209686 17209710 chr3R 17209798 17209817 7 127 8.0 8.5 8.2 0.8 131 chr3R 17209686 intergenic not near genes chr3R 17209752 intergenic not near genes chr3R 17209817 intergenic not near genes chr3R_7_17205001 chr3R_17205001 RAL-109_125b 3235 chr3R 17213978 17214047 chr3R 17214099 17214145 7 115 7.0 7.5 7.2 0.9 167 chr3R 17213978 intergenic not near genes chr3R 17214062 intergenic not near genes chr3R 17214145 intergenic not near genes chr3R_7_17210001 chr3R_17210001 RAL-109_125b 3236 chr3R 17242618 17242694 chr3R 17242750 17242826 23 129 3.0 5.0 4.0 4.6 208 chr3R 17242618 intron beat-IIb - chr3R 17242722 intron beat-IIb - chr3R 17242826 intron beat-IIb - chr3R_23_17240001 chr3R_17240001 RAL-109_125b 3237 chr3R 17256051 17256125 chr3R 17256200 17256274 26 137 8.5 3.5 6.0 3.7 223 chr3R 17256051 intron beat-IIb - chr3R 17256162 intron beat-IIb - chr3R 17256274 intron beat-IIb - chr3R_26_17255001 chr3R_17255001 RAL-109_125b 3238 chr3R 17294636 17294662 chr3R 17295107 17295140 BS 7 477 10.0 11.5 10.8 0.6 504 chr3R 17294636 intergenic not near genes chr3R 17294888 intergenic not near genes chr3R 17295140 intergenic not near genes chr3R_7_17290001 chr3R_17290001 RAL-109_125b 3239 chr3R 17294663 17294705 chr3R 17295101 17295155 BS 7 461 4.5 11.0 7.8 0.8 492 chr3R 17294663 intergenic not near genes chr3R 17294909 intergenic not near genes chr3R 17295155 intergenic not near genes chr3R_7_17290001 chr3R_17290001 RAL-109_125b 3240 chr3R 17346670 17346716 chr3R 17348283 17348329 F-element 14 1613 5.5 10.5 8.0 1.6 1659 chr3R 17346670 intron beat-IIa - chr3R 17347500 intron beat-IIa - chr3R 17348329 intron beat-IIa - chr3R_14_17345001 chr3R_17345001 RAL-109_125b 3241 chr3R 17348683 17348695 chr3R 17348822 17348834 5 139 16.0 8.5 12.2 0.4 151 chr3R 17348683 intron beat-IIa - chr3R 17348758 intron beat-IIa - chr3R 17348834 intron beat-IIa - chr3R_5_17345001 chr3R_17345001 RAL-109_125b 3242 chr3R 17348697 17348753 chr3R 17348816 17348852 18 130 7.5 7.5 7.5 2.1 155 chr3R 17348697 intron beat-IIa - chr3R 17348774 intron beat-IIa - chr3R 17348852 intron beat-IIa - chr3R_18_17345001 chr3R_17345001 RAL-109_125b 3243 chr3R 17350748 17350804 chr3R 17350894 17350970 4 150 2.5 7.0 4.8 0.7 222 chr3R 17350748 intron beat-IIa - chr3R 17350859 intron beat-IIa - chr3R 17350970 intron beat-IIa - chr3R_4_17350001 chr3R_17350001 RAL-109_125b 3244 chr3R 17363915 17363925 chr3R 17364488 17364511 5 582 12.5 9.5 11.0 0.4 596 chr3R 17363915 intron beat-IIa - chr3R 17364213 intron beat-IIa - chr3R 17364511 intron beat-IIa - chr3R_5_17360001 chr3R_17360001 RAL-109_125b 3245 chr3R 17363926 17363968 chr3R 17364486 17364522 7 559 2.5 9.5 6.0 1.0 596 chr3R 17363926 intron beat-IIa - chr3R 17364224 intron beat-IIa - chr3R 17364522 intron beat-IIa - chr3R_7_17360001 chr3R_17360001 RAL-109_125b 3246 chr3R 17381986 17382051 chr3R 17382133 17382197 20 141 10.5 8.5 9.5 1.9 211 chr3R 17381986 intron,intron Brf -,lute + chr3R 17382092 intron,intron Brf -,lute + chr3R 17382197 intron,intron,3` UTR Brf -,lute +,CR43196 - chr3R_20_17380001 chr3R_17380001 RAL-109_125b 3247 chr3R 17420814 17420853 chr3R 17420953 17420981 4 135 6.0 0.5 3.2 1.0 167 chr3R 17420814 exon CG42835 + chr3R 17420898 exon CG42835 + chr3R 17420981 3` UTR CG42835 + chr3R_4_17420001 chr3R_17420001 RAL-109_125b 3248 chr3R 17450961 17451040 chr3R 17451338 17451417 27 374 7.0 3.0 5.0 4.5 456 chr3R 17450961 intergenic not near genes chr3R 17451189 intergenic not near genes chr3R 17451417 intergenic not near genes chr3R_27_17450001 chr3R_17450001 RAL-109_125b 3249 chr3R 17454569 17454624 chr3R 17454805 17454860 12 235 4.0 3.0 3.5 2.7 291 chr3R 17454569 intergenic not near genes chr3R 17454714 intergenic not near genes chr3R 17454860 intergenic not near genes chr3R_12_17450001 chr3R_17450001 RAL-109_125b 3250 chr3R 17461151 17461222 chr3R 17461283 17461354 24 130 9.0 6.5 7.8 2.7 203 chr3R 17461151 intergenic not near genes chr3R 17461252 intergenic not near genes chr3R 17461354 intergenic not near genes chr3R_24_17460001 chr3R_17460001 RAL-109_125b 3251 chr3R 17497919 17497986 chr3R 17498055 17498121 33 134 5.5 10.0 7.8 3.7 202 chr3R 17497919 intron Dscam3 - chr3R 17498020 intron Dscam3 - chr3R 17498121 intron Dscam3 - chr3R_33_17495001 chr3R_17495001 RAL-109_125b 3252 chr3R 17509234 17509241 chr3R 17516806 17516839 412 6 7588 9.0 12.0 10.5 0.5 7605 chr3R 17509234 intergenic not near genes chr3R 17513036 intergenic not near genes chr3R 17516839 intergenic not near genes chr3R_6_17510001 chr3R_17510001 RAL-109_125b 3253 chr3R 17521514 17521585 chr3R 17521721 17521780 9 201 4.5 9.0 6.8 1.2 266 chr3R 17521514 intergenic not near genes chr3R 17521647 intergenic not near genes chr3R 17521780 intergenic not near genes chr3R_9_17520001 chr3R_17520001 RAL-109_125b 3254 chr3R 17522174 17522197 chr3R 17522317 17522320 4 138 16.5 0.0 8.2 0.4 146 chr3R 17522174 intergenic not near genes chr3R 17522247 intergenic not near genes chr3R 17522320 intergenic not near genes chr3R_4_17520001 chr3R_17520001 RAL-109_125b 3255 chr3R 17524866 17524931 chr3R 17524994 17525061 5 129 0.5 5.5 3.0 1.2 195 chr3R 17524866 intergenic not near genes chr3R 17524964 intergenic not near genes chr3R 17525061 intergenic not near genes chr3R_5_17520001 chr3R_17520001 RAL-109_125b 3256 chr3R 17591252 17591265 chr3R 17591732 17591751 F-element 4 482 20.0 10.0 15.0 0.2 499 chr3R 17591252 intergenic not near genes chr3R 17591502 intergenic not near genes chr3R 17591751 intergenic not near genes chr3R_4_17590001 chr3R_17590001 RAL-109_125b 3257 chr3R 17591274 17591300 chr3R 17591729 17591758 F-element 12 473 12.0 9.5 10.8 1.0 484 chr3R 17591274 intergenic not near genes chr3R 17591516 intergenic not near genes chr3R 17591758 intergenic not near genes chr3R_12_17590001 chr3R_17590001 RAL-109_125b 3258 chr3R 17592375 17592455 chr3R 17592514 17592595 17 132 6.5 6.0 6.2 2.4 220 chr3R 17592375 intergenic not near genes chr3R 17592485 intergenic not near genes chr3R 17592595 intergenic not near genes chr3R_17_17590001 chr3R_17590001 RAL-109_125b 3259 chr3R 17638293 17638334 chr3R 17638805 17638870 roo 17 530 9.5 7.0 8.2 1.8 577 chr3R 17638293 intron CG43175 + chr3R 17638582 intron CG43175 + chr3R 17638870 intron,intron CG43175 +,CR45222 + chr3R_17_17635001 chr3R_17635001 RAL-109_125b 3260 chr3R 17645665 17645688 chr3R 17645845 17645857 6 178 11.5 7.5 9.5 0.6 192 chr3R 17645665 intergenic CG43175 + chr3R 17645761 intergenic CG43175 + chr3R 17645857 intergenic not near genes chr3R_6_17645001 chr3R_17645001 RAL-109_125b 3261 chr3R 17767996 17768064 chr3R 17768150 17768218 26 152 8.0 6.0 7.0 3.2 222 chr3R 17767996 intergenic CG43102 - chr3R 17768107 intergenic CG43102 - chr3R 17768218 intergenic CG43102 - chr3R_26_17765001 chr3R_17765001 RAL-109_125b 3262 chr3R 17773363 17773392 chr3R 17773492 17773522 11 129 6.0 11.5 8.8 1.1 159 chr3R 17773363 intron CG43102 - chr3R 17773442 intron CG43102 - chr3R 17773522 exon CG43102 - chr3R_11_17770001 chr3R_17770001 RAL-109_125b 3263 chr3R 17823159 17823233 chr3R 17823294 17823368 18 135 5.5 4.0 4.8 3.1 209 chr3R 17823159 intron tinc + chr3R 17823264 intron tinc + chr3R 17823368 intron tinc + chr3R_18_17820001 chr3R_17820001 RAL-109_125b 3264 chr3R 17825876 17825932 chr3R 17826005 17826064 10 130 0.0 5.0 2.5 2.9 188 chr3R 17825876 intron tinc + chr3R 17825970 intron tinc + chr3R 17826064 intron tinc + chr3R_10_17825001 chr3R_17825001 RAL-109_125b 3265 chr3R 17856032 17856041 chr3R 17856146 17856192 5 143 11.5 5.5 8.5 0.5 160 chr3R 17856032 intron tinc + chr3R 17856112 intron tinc + chr3R 17856192 intron tinc + chr3R_5_17855001 chr3R_17855001 RAL-109_125b 3266 chr3R 17898340 17898360 chr3R 17898455 17898460 7 121 6.0 13.5 9.8 0.6 120 chr3R 17898340 intron Rim - chr3R 17898400 intron Rim - chr3R 17898460 intron Rim - chr3R_7_17895001 chr3R_17895001 RAL-109_125b 3267 chr3R 17899046 17899059 chr3R 17899174 17899187 5 128 9.5 8.0 8.8 0.5 141 chr3R 17899046 intron Rim - chr3R 17899116 intron Rim - chr3R 17899187 intron Rim - chr3R_5_17895001 chr3R_17895001 RAL-109_125b 3268 chr3R 9932070 9932072 chr3R 17899073 17899075 4 7967003 27.5 9.5 18.5 0.2 7967005 chr3R 9932070 intron Glut4EF + chr3R 13915572 intergenic not near genes chr3R 17899075 intron Rim - chr3R_4_13915001 chr3R_13915001 RAL-109_125b 3269 chr3R 17925815 17925851 chr3R 17927328 17927343 hobo 14 1510 11.0 8.5 9.8 1.3 1528 chr3R 17925815 intron cpo + chr3R 17926579 intron cpo + chr3R 17927343 intron cpo + chr3R_14_17925001 chr3R_17925001 RAL-109_125b 3270 chr3R 17925858 17925885 chr3R 17927318 17927348 hobo 4 1470 7.5 6.5 7.0 0.5 1490 chr3R 17925858 intron cpo + chr3R 17926603 intron cpo + chr3R 17927348 intron cpo + chr3R_4_17925001 chr3R_17925001 RAL-109_125b 3271 chr3R 18002988 18003039 chr3R 18003134 18003162 16 140 13.5 0.5 7.0 2.0 174 chr3R 18002988 intron cpo + chr3R 18003075 intron cpo + chr3R 18003162 intron cpo + chr3R_16_18000001 chr3R_18000001 RAL-109_125b 3272 chr3R 18032729 18032809 chr3R 18040452 18040532 opus 29 7722 0.5 5.0 2.8 7.6 7803 chr3R 18032729 intergenic not near genes chr3R 18036630 intergenic not near genes chr3R 18040532 intergenic not near genes chr3R_29_18035001 chr3R_18035001 RAL-109_125b 3273 chr3R 18041711 18041751 chr3R 18041838 18041851 4 115 1.0 0.5 0.8 2.2 140 chr3R 18041711 intergenic not near genes chr3R 18041781 intergenic not near genes chr3R 18041851 intergenic not near genes chr3R_4_18040001 chr3R_18040001 RAL-109_125b 3274 chr3R 18061558 18061567 chr3R 18063176 18063185 F-element 4 1618 14.0 7.0 10.5 0.3 1627 chr3R 18061558 intergenic not near genes chr3R 18062372 intergenic not near genes chr3R 18063185 intergenic not near genes chr3R_4_18060001 chr3R_18060001 RAL-109_125b 3275 chr3R 18061568 18061598 chr3R 18063169 18063216 F-element 9 1615 6.0 5.5 5.8 1.3 1648 chr3R 18061568 intergenic not near genes chr3R 18062392 intergenic not near genes chr3R 18063216 intergenic not near genes chr3R_9_18060001 chr3R_18060001 RAL-109_125b 3276 chr3R 18075620 18075715 chr3R 18075827 18075865 29 198 0.0 9.0 4.5 5.3 245 chr3R 18075620 intergenic not near genes chr3R 18075742 intergenic not near genes chr3R 18075865 intergenic not near genes chr3R_29_18075001 chr3R_18075001 RAL-109_125b 3277 chr3R 18122846 18122916 chr3R 18122974 18123043 16 127 6.0 8.5 7.2 2.0 197 chr3R 18122846 intron sr + chr3R 18122944 intron sr + chr3R 18123043 intron sr + chr3R_16_18120001 chr3R_18120001 RAL-109_125b 3278 chr3R 18126165 18126224 chr3R 18126294 18126353 21 128 10.0 6.5 8.2 2.3 188 chr3R 18126165 intron sr + chr3R 18126259 intron sr + chr3R 18126353 intron sr + chr3R_21_18125001 chr3R_18125001 RAL-109_125b 3279 chr3R 18136159 18136204 chr3R 18136352 18136381 12 191 8.0 2.0 5.0 2.0 222 chr3R 18136159 intergenic not near genes chr3R 18136270 intergenic not near genes chr3R 18136381 intergenic not near genes chr3R_12_18135001 chr3R_18135001 RAL-109_125b 3280 chr3R 18143468 18143514 chr3R 18143606 18143652 8 136 0.0 0.5 0.2 6.7 184 chr3R 18143468 intergenic not near genes chr3R 18143560 intergenic not near genes chr3R 18143652 intergenic not near genes chr3R_8_18140001 chr3R_18140001 RAL-109_125b 3281 chr3R 18155512 18155583 chr3R 18155639 18155693 33 125 7.5 5.5 6.5 4.4 181 chr3R 18155512 intergenic not near genes chr3R 18155602 intergenic not near genes chr3R 18155693 intergenic not near genes chr3R_33_18155001 chr3R_18155001 RAL-109_125b 3282 chr3R 18215738 18215771 chr3R 18215947 18215990 12 217 0.5 8.5 4.5 2.2 252 chr3R 18215738 intergenic CG14314 + chr3R 18215864 intergenic CG14314 + chr3R 18215990 intergenic CG14314 + chr3R_12_18215001 chr3R_18215001 RAL-109_125b 3283 chr3R 18352543 18352599 chr3R 18352686 18352742 19 143 8.5 7.5 8.0 2.1 199 chr3R 18352543 intron CG15803 - chr3R 18352642 intron CG15803 - chr3R 18352742 3` UTR CG15803 - chr3R_19_18350001 chr3R_18350001 RAL-109_125b 3284 chr3R 18464262 18464336 chr3R 18464450 18464525 14 186 0.0 7.5 3.8 2.9 263 chr3R 18464262 intron fru - chr3R 18464394 intron fru - chr3R 18464525 intron fru - chr3R_14_18460001 chr3R_18460001 RAL-109_125b 3285 chr3R 18472241 18472299 chr3R 18472392 18472450 21 151 6.0 6.5 6.2 2.9 209 chr3R 18472241 intron fru - chr3R 18472346 intron fru - chr3R 18472450 intron fru - chr3R_21_18470001 chr3R_18470001 RAL-109_125b 3286 chr3R 18473173 18473178 chr3R 18473322 18473327 4 149 4.0 0.0 2.0 1.3 154 chr3R 18473173 intron fru - chr3R 18473250 intron fru - chr3R 18473327 intron fru - chr3R_4_18470001 chr3R_18470001 RAL-109_125b 3287 chr3R 18485294 18485355 chr3R 18485444 18485446 5 138 4.5 5.5 5.0 0.8 152 chr3R 18485294 intron fru - chr3R 18485370 intron fru - chr3R 18485446 intron fru - chr3R_5_18485001 chr3R_18485001 RAL-109_125b 3288 chr3R 18496624 18496657 chr3R 18496753 18496786 10 129 7.0 7.0 7.0 1.2 162 chr3R 18496624 intron fru - chr3R 18496705 intron fru - chr3R 18496786 intron fru - chr3R_10_18495001 chr3R_18495001 RAL-109_125b 3289 chr3R 18500699 18500717 chr3R 18500870 18500888 6 171 7.5 9.0 8.2 0.7 189 chr3R 18500699 intron fru - chr3R 18500794 intron fru - chr3R 18500888 intron fru - chr3R_6_18500001 chr3R_18500001 RAL-109_125b 3290 chr3R 18500720 18500736 chr3R 18500866 18500887 11 165 5.5 7.5 6.5 1.5 167 chr3R 18500720 intron fru - chr3R 18500804 intron fru - chr3R 18500887 intron fru - chr3R_11_18500001 chr3R_18500001 RAL-109_125b 3291 chr3R 18501545 18501554 chr3R 18501676 18501685 4 131 19.0 5.0 12.0 0.3 140 chr3R 18501545 intron fru - chr3R 18501615 intron fru - chr3R 18501685 intron fru - chr3R_4_18500001 chr3R_18500001 RAL-109_125b 3292 chr3R 18501561 18501616 chr3R 18501671 18501747 27 129 6.0 5.5 5.8 4.0 186 chr3R 18501561 intron fru - chr3R 18501654 intron fru - chr3R 18501747 intron fru - chr3R_27_18500001 chr3R_18500001 RAL-109_125b 3293 chr3R 18505420 18505436 chr3R 18505550 18505566 4 130 8.5 0.0 4.2 0.8 146 chr3R 18505420 intron fru - chr3R 18505493 intron fru - chr3R 18505566 intron fru - chr3R_4_18505001 chr3R_18505001 RAL-109_125b 3294 chr3R 18606461 18606512 chr3R 18610743 18610775 F-element 18 4280 10.0 9.0 9.5 1.7 4314 chr3R 18606461 intron,intron qin +,CG14304 - chr3R 18608618 intron,intron qin +,CG14304 - chr3R 18610775 intron,intron qin +,CG14304 - chr3R_18_18605001 chr3R_18605001 RAL-109_125b 3295 chr3R 18606513 18606525 chr3R 18610733 18610807 F-element 7 4272 6.5 8.0 7.2 0.9 4294 chr3R 18606513 intron,intron qin +,CG14304 - chr3R 18608660 intron,intron qin +,CG14304 - chr3R 18610807 intron,intron qin +,CG14304 - chr3R_7_18605001 chr3R_18605001 RAL-109_125b 3296 chr3R 18615331 18615397 chr3R 18615468 18615536 15 139 1.0 6.0 3.5 3.3 205 chr3R 18615331 intron,intron qin +,CG14304 - chr3R 18615434 intron,intron qin +,CG14304 - chr3R 18615536 intron,intron qin +,CG14304 - chr3R_15_18615001 chr3R_18615001 RAL-109_125b 3297 chr3R 18618233 18618292 chr3R 18618368 18618427 15 133 4.5 9.0 6.8 1.9 194 chr3R 18618233 intron,intron qin +,CG14304 - chr3R 18618330 intron,intron qin +,CG14304 - chr3R 18618427 intron,intron qin +,CG14304 - chr3R_15_18615001 chr3R_18615001 RAL-109_125b 3298 chr3R 18628825 18629035 chr3R 18628999 18629175 23 158 0.0 0.0 0.0 23.0 350 chr3R 18628825 intron qin + chr3R 18629000 intron qin + chr3R 18629175 intron,3` UTR qin +,CG14301 - chr3R_23_18625001 chr3R_18625001 RAL-109_125b 3299 chr3R 18721010 18721067 chr3R 18721197 18721256 14 187 3.5 4.0 3.8 2.9 246 chr3R 18721010 intron Cha + chr3R 18721133 intron Cha + chr3R 18721256 intron Cha + chr3R_14_18720001 chr3R_18720001 RAL-109_125b 3300 chr3R 18781649 18781669 chr3R 18781774 18781783 5 123 16.5 3.5 10.0 0.5 134 chr3R 18781649 intron CG7720 - chr3R 18781716 intron CG7720 - chr3R 18781783 intron CG7720 - chr3R_5_18780001 chr3R_18780001 RAL-109_125b 3301 chr3R 18781672 18781721 chr3R 18781770 18781847 26 120 8.0 4.0 6.0 3.7 175 chr3R 18781672 intron CG7720 - chr3R 18781760 intron CG7720 - chr3R 18781847 intron CG7720 - chr3R_26_18780001 chr3R_18780001 RAL-109_125b 3302 chr3R 18791467 18791496 chr3R 18791576 18791590 4 112 11.5 4.5 8.0 0.4 123 chr3R 18791467 intron CG7720 - chr3R 18791528 intron CG7720 - chr3R 18791590 intron CG7720 - chr3R_4_18790001 chr3R_18790001 RAL-109_125b 3303 chr3R 18792766 18792829 chr3R 18792899 18792957 12 131 5.5 0.0 2.8 3.2 191 chr3R 18792766 intron CG7720 - chr3R 18792862 intron CG7720 - chr3R 18792957 intron CG7720 - chr3R_12_18790001 chr3R_18790001 RAL-109_125b 3304 chr3R 18812036 18812104 chr3R 18812164 18812207 18 124 9.5 10.0 9.8 1.7 171 chr3R 18812036 intron CG18208 - chr3R 18812122 intron CG18208 - chr3R 18812207 intron CG18208 - chr3R_18_18810001 chr3R_18810001 RAL-109_125b 3305 chr3R 18868574 18868598 chr3R 18868705 18868722 4 128 12.0 16.5 14.2 0.3 148 chr3R 18868574 intergenic not near genes chr3R 18868648 intergenic not near genes chr3R 18868722 intergenic not near genes chr3R_4_18865001 chr3R_18865001 RAL-109_125b 3306 chr3R 18868613 18868616 chr3R 18868699 18868722 4 100 9.5 15.5 12.5 0.3 109 chr3R 18868613 intergenic not near genes chr3R 18868668 intergenic not near genes chr3R 18868722 intergenic not near genes chr3R_4_18865001 chr3R_18865001 RAL-109_125b 3307 chr3R 18887555 18887599 chr3R 18887683 18887730 15 127 12.5 12.5 12.5 1.1 175 chr3R 18887555 intergenic not near genes chr3R 18887642 intergenic not near genes chr3R 18887730 intergenic not near genes chr3R_15_18885001 chr3R_18885001 RAL-109_125b 3308 chr3R 18897561 18897584 chr3R 18897687 18897710 6 126 10.0 11.5 10.8 0.5 149 chr3R 18897561 intergenic not near genes chr3R 18897636 intergenic CG14297 + chr3R 18897710 intergenic CG14297 + chr3R_6_18895001 chr3R_18895001 RAL-109_125b 3309 chr3R 18933785 18933811 chr3R 18933883 18933920 5 98 15.5 9.0 12.2 0.4 135 chr3R 18933785 intron CG42613 + chr3R 18933852 intron CG42613 + chr3R 18933920 intron CG42613 + chr3R_5_18930001 chr3R_18930001 RAL-109_125b 3310 chr3R 18988483 18988558 chr3R 18988792 18988867 24 308 10.5 6.5 8.5 2.5 384 chr3R 18988483 intron gukh + chr3R 18988675 intron gukh + chr3R 18988867 intron gukh + chr3R_24_18985001 chr3R_18985001 RAL-109_125b 3311 chr3R 18991344 18991362 chr3R 18991471 18991484 5 126 19.5 6.0 12.8 0.4 140 chr3R 18991344 intron gukh + chr3R 18991414 intron gukh + chr3R 18991484 intron gukh + chr3R_5_18990001 chr3R_18990001 RAL-109_125b 3312 chr3R 18991364 18991393 chr3R 18991470 18991519 14 122 12.0 6.5 9.2 1.4 155 chr3R 18991364 intron gukh + chr3R 18991442 intron gukh + chr3R 18991519 intron gukh + chr3R_14_18990001 chr3R_18990001 RAL-109_125b 3313 chr3R 18991394 18991419 chr3R 18991466 18991524 11 113 8.5 8.5 8.5 1.2 130 chr3R 18991394 intron gukh + chr3R 18991459 intron gukh + chr3R 18991524 intron gukh + chr3R_11_18990001 chr3R_18990001 RAL-109_125b 3314 chr3R 19000725 19000727 chr3R 29772604 29772607 4 10771880 30.0 10.5 20.2 0.2 10771882 chr3R 19000725 intron gukh + chr3R 24386666 intron CG5768 - chr3R 29772607 intron kay + chr3R_4_24385001 chr3R_24385001 RAL-109_125b 3315 chr3R 19136407 19136443 chr3R 19139743 19139793 Bari1 16 3344 70.0 42.0 56.0 0.3 3386 chr3R 19136407 exon Cyp12a4 + chr3R 19138100 intergenic not near genes chr3R 19139793 3` UTR Ppcs - chr3R_16_19135001 chr3R_19135001 RAL-109_125b 3316 chr3R 19193002 19193005 chr3R 19197289 19197359 F-element 8 4331 0.0 1.5 0.8 4.4 4357 chr3R 19193002 intron CG31475 + chr3R 19195180 intron CG31475 + chr3R 19197359 intron CG31475 + chr3R_8_19195001 chr3R_19195001 RAL-109_125b 3317 chr3R 19344620 19344692 chr3R 19344805 19344877 20 184 6.5 3.5 5.0 3.3 257 chr3R 19344620 intergenic not near genes chr3R 19344748 intergenic not near genes chr3R 19344877 intergenic not near genes chr3R_20_19340001 chr3R_19340001 RAL-109_125b 3318 chr3R 19373526 19373593 chr3R 19373643 19373698 14 118 8.0 5.0 6.5 1.9 172 chr3R 19373526 intron Ino80 - chr3R 19373612 intron Ino80 - chr3R 19373698 intron Ino80 - chr3R_14_19370001 chr3R_19370001 RAL-109_125b 3319 chr3R 19417500 19417557 chr3R 19417638 19417705 10 139 0.0 2.0 1.0 5.0 205 chr3R 19417500 intron CG31221 + chr3R 19417602 intron CG31221 + chr3R 19417705 intron CG31221 + chr3R_10_19415001 chr3R_19415001 RAL-109_125b 3320 chr3R 19431070 19431125 chr3R 19431355 19431410 22 282 2.0 7.0 4.5 4.0 340 chr3R 19431070 intron CG31221 + chr3R 19431240 intron CG31221 + chr3R 19431410 intron CG31221 + chr3R_22_19430001 chr3R_19430001 RAL-109_125b 3321 chr3R 19431451 19431497 chr3R 19431587 19431631 5 135 4.5 7.5 6.0 0.7 180 chr3R 19431451 intron CG31221 + chr3R 19431541 intron CG31221 + chr3R 19431631 intron CG31221 + chr3R_5_19430001 chr3R_19430001 RAL-109_125b 3322 chr3R 19473914 19473978 chr3R 19474045 19474109 19 131 8.5 6.0 7.2 2.3 195 chr3R 19473914 intron Dys + chr3R 19474012 intron Dys + chr3R 19474109 intron Dys + chr3R_19_19470001 chr3R_19470001 RAL-109_125b 3323 chr3R 19516269 19516320 chr3R 19516390 19516463 9 140 8.5 4.5 6.5 1.2 194 chr3R 19516269 intron Dys + chr3R 19516366 intron Dys + chr3R 19516463 intron Dys + chr3R_9_19515001 chr3R_19515001 RAL-109_125b 3324 chr3R 19593467 19593515 chr3R 19593597 19593645 21 131 8.0 8.0 8.0 2.3 178 chr3R 19593467 intron Dys + chr3R 19593556 intron Dys + chr3R 19593645 intron Dys + chr3R_21_19590001 chr3R_19590001 RAL-109_125b 3325 chr3R 19602524 19602601 chr3R 19602654 19602731 20 126 6.5 4.5 5.5 3.1 207 chr3R 19602524 exon CG7333 + chr3R 19602628 3` UTR CG7333 + chr3R 19602731 intergenic CG7333 + chr3R_20_19600001 chr3R_19600001 RAL-109_125b 3326 chr3R 19672331 19672360 chr3R 19672478 19672507 13 145 6.5 11.5 9.0 1.3 176 chr3R 19672331 intron Naam + chr3R 19672419 intron Naam + chr3R 19672507 intron Naam + chr3R_13_19670001 chr3R_19670001 RAL-109_125b 3327 chr3R 19717650 19717698 chr3R 19717782 19717829 19 127 10.0 8.5 9.2 1.9 179 chr3R 19717650 intergenic not near genes chr3R 19717740 intergenic not near genes chr3R 19717829 intergenic not near genes chr3R_19_19715001 chr3R_19715001 RAL-109_125b 3328 chr3R 19717705 19717722 chr3R 19717780 19717808 4 98 5.5 8.0 6.8 0.5 103 chr3R 19717705 intergenic not near genes chr3R 19717756 intergenic not near genes chr3R 19717808 intergenic not near genes chr3R_4_19715001 chr3R_19715001 RAL-109_125b 3329 chr3R 19774261 19774262 chr3R 19778218 19778219 4 3964 2.5 16.5 9.5 0.4 3958 chr3R 19774261 intron GluClalpha + chr3R 19776240 exon CG11659 - chr3R 19778219 intergenic not near genes chr3R_4_19775001 chr3R_19775001 RAL-109_125b 3330 chr3R 19783139 19783206 chr3R 19783277 19783344 19 138 2.5 4.5 3.5 4.2 205 chr3R 19783139 3` UTR CG11407 + chr3R 19783242 intergenic CG11407 +,CG11453 + chr3R 19783344 intergenic CG11453 +,CG11407 + chr3R_19_19780001 chr3R_19780001 RAL-109_125b 3331 chr3R 19830834 19830883 chr3R 19830961 19831010 6 127 0.0 5.0 2.5 1.7 176 chr3R 19830834 intron bnl - chr3R 19830922 intron bnl - chr3R 19831010 intron bnl - chr3R_6_19830001 chr3R_19830001 RAL-109_125b 3332 chr3R 19953919 19953979 chr3R 19954026 19954071 16 115 12.0 11.5 11.8 1.2 152 chr3R 19953919 intron Hs6st - chr3R 19953995 intron Hs6st - chr3R 19954071 intron Hs6st - chr3R_16_19950001 chr3R_19950001 RAL-109_125b 3333 chr3R 20059416 20059494 chr3R 20059546 20059624 26 129 7.0 7.0 7.0 3.2 208 chr3R 20059416 intron CG4390 - chr3R 20059520 intron CG4390 - chr3R 20059624 exon CG4390 - chr3R_26_20055001 chr3R_20055001 RAL-109_125b 3334 chr3R 20109487 20109560 chr3R 20114741 20114816 copia 10 5253 6.0 8.0 7.0 1.2 5329 chr3R 20109487 intergenic not near genes chr3R 20112152 intergenic not near genes chr3R 20114816 intergenic CG10887 + chr3R_10_20110001 chr3R_20110001 RAL-109_125b 3335 chr3R 20147477 20147552 chr3R 20147906 20147981 17 428 7.0 7.5 7.2 2.1 504 chr3R 20147477 intergenic not near genes chr3R 20147729 intergenic not near genes chr3R 20147981 intergenic not near genes chr3R_17_20145001 chr3R_20145001 RAL-109_125b 3336 chr3R 20156657 20156714 chr3R 20165877 20165934 roo 21 9217 6.5 12.5 9.5 2.0 9277 chr3R 20156657 intergenic not near genes chr3R 20161296 intergenic not near genes chr3R 20165934 intergenic not near genes chr3R_21_20160001 chr3R_20160001 RAL-109_125b 3337 chr3R 20179617 20179674 chr3R 20179759 20179816 18 142 6.5 3.5 5.0 3.0 199 chr3R 20179617 intergenic not near genes chr3R 20179716 intergenic not near genes chr3R 20179816 intergenic not near genes chr3R_18_20175001 chr3R_20175001 RAL-109_125b 3338 chr3R 20188165 20188210 chr3R 20188351 20188398 22 194 0.5 14.0 7.2 2.7 233 chr3R 20188165 intergenic not near genes chr3R 20188282 intergenic not near genes chr3R 20188398 intergenic not near genes chr3R_22_20185001 chr3R_20185001 RAL-109_125b 3339 chr3R 20191745 20191778 chr3R 20191885 20191890 10 132 3.5 10.5 7.0 1.2 145 chr3R 20191745 intergenic not near genes chr3R 20191818 intergenic not near genes chr3R 20191890 intergenic not near genes chr3R_10_20190001 chr3R_20190001 RAL-109_125b 3340 chr3R 20203908 20203922 chr3R 20204039 20204053 4 131 3.0 6.5 4.8 0.7 145 chr3R 20203908 intergenic not near genes chr3R 20203980 intergenic not near genes chr3R 20204053 intergenic not near genes chr3R_4_20200001 chr3R_20200001 RAL-109_125b 3341 chr3R 20205360 20205594 chr3R 20205527 20205766 25 165 0.0 0.0 0.0 25.0 406 chr3R 20205360 intron Nlg4 + chr3R 20205563 intron Nlg4 + chr3R 20205766 intron Nlg4 + chr3R_25_20205001 chr3R_20205001 RAL-109_125b 3342 chr3R 20245275 20245287 chr3R 20248935 20248947 F-element 7 3660 0.5 2.0 1.2 3.2 3672 chr3R 20245275 3` UTR Nlg4 + chr3R 20247111 intergenic not near genes chr3R 20248947 intergenic not near genes chr3R_7_20245001 chr3R_20245001 RAL-109_125b 3343 chr3R 20252168 20252196 chr3R 20252296 20252324 13 128 4.5 0.5 2.5 3.7 156 chr3R 20252168 intergenic not near genes chr3R 20252246 intergenic not near genes chr3R 20252324 intergenic cic + chr3R_13_20250001 chr3R_20250001 RAL-109_125b 3344 chr3R 20256791 20256860 chr3R 20256917 20256988 15 127 0.5 6.5 3.5 3.3 197 chr3R 20256791 intron cic + chr3R 20256890 intron cic + chr3R 20256988 intron cic + chr3R_15_20255001 chr3R_20255001 RAL-109_125b 3345 chr3R 20266473 20266494 chr3R 20272994 20273015 Burdock 9 6520 11.0 8.0 9.5 0.9 6542 chr3R 20266473 intron cic + chr3R 20269744 intron cic + chr3R 20273015 intron cic + chr3R_9_20265001 chr3R_20265001 RAL-109_125b 3346 chr3R 20266497 20266534 chr3R 20272987 20273055 Burdock 23 6516 8.5 7.0 7.8 2.6 6558 chr3R 20266497 intron cic + chr3R 20269776 intron cic + chr3R 20273055 intron cic + chr3R_23_20265001 chr3R_20265001 RAL-109_125b 3347 chr3R 20282229 20282297 chr3R 20282355 20282383 19 124 1.0 7.0 4.0 3.8 154 chr3R 20282229 intron cic + chr3R 20282306 intron cic + chr3R 20282383 intron cic + chr3R_19_20280001 chr3R_20280001 RAL-109_125b 3348 chr3R 20330955 20331019 chr3R 20331491 20331555 roo 23 536 15.5 6.5 11.0 1.9 600 chr3R 20330955 intergenic Sirt2 + chr3R 20331255 intergenic Sirt2 + chr3R 20331555 intergenic not near genes chr3R_23_20330001 chr3R_20330001 RAL-109_125b 3349 chr3R 20345331 20345400 chr3R 20345470 20345539 16 139 0.0 6.0 3.0 4.0 208 chr3R 20345331 intergenic not near genes chr3R 20345435 intergenic not near genes chr3R 20345539 intergenic not near genes chr3R_16_20345001 chr3R_20345001 RAL-109_125b 3350 chr3R 20371453 20371463 chr3R 20371582 20371592 4 129 18.0 5.0 11.5 0.3 139 chr3R 20371453 intergenic not near genes chr3R 20371522 intergenic not near genes chr3R 20371592 intergenic not near genes chr3R_4_20370001 chr3R_20370001 RAL-109_125b 3351 chr3R 20371466 20371515 chr3R 20371575 20371628 21 125 9.5 5.5 7.5 2.5 162 chr3R 20371466 intergenic not near genes chr3R 20371547 intergenic not near genes chr3R 20371628 intergenic not near genes chr3R_21_20370001 chr3R_20370001 RAL-109_125b 3352 chr3R 20394781 20394817 chr3R 20394907 20394941 4 126 6.5 5.5 6.0 0.6 160 chr3R 20394781 intron Gfrl - chr3R 20394861 intron Gfrl - chr3R 20394941 intron Gfrl - chr3R_4_20390001 chr3R_20390001 RAL-109_125b 3353 chr3R 20434793 20434865 chr3R 20435028 20435100 26 235 3.5 4.0 3.8 5.4 307 chr3R 20434793 intron Gfrl - chr3R 20434946 intron Gfrl - chr3R 20435100 intron Gfrl - chr3R_26_20430001 chr3R_20430001 RAL-109_125b 3354 chr3R 20472108 20472166 chr3R 20472240 20472298 13 119 9.5 3.0 6.2 1.8 190 chr3R 20472108 intron Gfrl - chr3R 20472203 intron Gfrl - chr3R 20472298 intron Gfrl - chr3R_13_20470001 chr3R_20470001 RAL-109_125b 3355 chr3R 20487897 20487940 chr3R 20488059 20488102 14 155 13.0 11.5 12.2 1.1 205 chr3R 20487897 intergenic not near genes chr3R 20488000 intergenic not near genes chr3R 20488102 intergenic not near genes chr3R_14_20485001 chr3R_20485001 RAL-109_125b 3356 chr3R 20512296 20512368 chr3R 20512429 20512491 17 128 5.5 6.0 5.8 2.5 195 chr3R 20512296 intron CG4288 - chr3R 20512394 5` UTR CG4288 - chr3R 20512491 intergenic CG4288 - chr3R_17_20510001 chr3R_20510001 RAL-109_125b 3357 chr3R 20512960 20513020 chr3R 20515713 20515773 opus 18 2753 5.5 3.5 4.5 3.3 2813 chr3R 20512960 intergenic CG4288 - chr3R 20514366 intergenic not near genes chr3R 20515773 intergenic not near genes chr3R_18_20510001 chr3R_20510001 RAL-109_125b 3358 chr3R 20594443 20594512 chr3R 20594583 20594656 11 140 4.0 0.0 2.0 3.7 213 chr3R 20594443 intron bon + chr3R 20594550 intron bon + chr3R 20594656 intron bon + chr3R_11_20590001 chr3R_20590001 RAL-109_125b 3359 chr3R 20596144 20596210 chr3R 20596281 20596347 21 137 7.0 5.5 6.2 2.9 203 chr3R 20596144 intron bon + chr3R 20596246 intron bon + chr3R 20596347 intron bon + chr3R_21_20595001 chr3R_20595001 RAL-109_125b 3360 chr3R 20602560 20602618 chr3R 20602680 20602753 24 133 7.0 10.0 8.5 2.5 193 chr3R 20602560 intron bon + chr3R 20602656 intron bon + chr3R 20602753 intron bon + chr3R_24_20600001 chr3R_20600001 RAL-109_125b 3361 chr3R 20703445 20703507 chr3R 20703884 20703951 23 443 3.5 8.0 5.8 3.4 506 chr3R 20703445 intron Oamb - chr3R 20703698 intron Oamb - chr3R 20703951 intron Oamb - chr3R_23_20700001 chr3R_20700001 RAL-109_125b 3362 chr3R 20707695 20707772 chr3R 20707960 20708037 30 264 5.5 6.5 6.0 4.3 342 chr3R 20707695 intron Oamb - chr3R 20707866 intron Oamb - chr3R 20708037 intron Oamb - chr3R_30_20705001 chr3R_20705001 RAL-109_125b 3363 chr3R 20716764 20716837 chr3R 20717151 20717194 26 380 8.5 10.0 9.2 2.5 430 chr3R 20716764 intergenic not near genes chr3R 20716979 intergenic not near genes chr3R 20717194 intergenic not near genes chr3R_26_20715001 chr3R_20715001 RAL-109_125b 3364 chr3R 20730895 20730954 chr3R 20731036 20731112 16 143 9.0 0.0 4.5 2.9 217 chr3R 20730895 intergenic not near genes chr3R 20731004 intergenic not near genes chr3R 20731112 intergenic not near genes chr3R_16_20730001 chr3R_20730001 RAL-109_125b 3365 chr3R 20733727 20733742 chr3R 20733863 20733879 5 135 21.0 10.0 15.5 0.3 152 chr3R 20733727 intergenic not near genes chr3R 20733803 intergenic not near genes chr3R 20733879 intergenic not near genes chr3R_5_20730001 chr3R_20730001 RAL-109_125b 3366 chr3R 20733744 20733793 chr3R 20733856 20733915 17 127 8.5 10.0 9.2 1.7 171 chr3R 20733744 intergenic not near genes chr3R 20733830 intergenic not near genes chr3R 20733915 intergenic not near genes chr3R_17_20730001 chr3R_20730001 RAL-109_125b 3367 chr3R 20771705 20771719 chr3R 20771800 20771850 6 125 0.0 14.0 7.0 0.8 145 chr3R 20771705 intron,intron Syp +,Takl1 - chr3R 20771778 intron,intron Syp +,Takl1 - chr3R 20771850 intron,exon Syp +,Takl1 - chr3R_6_20770001 chr3R_20770001 RAL-109_125b 3368 chr3R 20787388 20787458 chr3R 20787529 20787599 30 140 5.5 4.0 4.8 5.2 211 chr3R 20787388 intron Syp + chr3R 20787494 intron Syp + chr3R 20787599 intron Syp + chr3R_30_20785001 chr3R_20785001 RAL-109_125b 3369 chr3R 20848301 20848358 chr3R 20848441 20848498 9 139 0.5 7.5 4.0 1.8 197 chr3R 20848301 intergenic not near genes chr3R 20848400 intergenic not near genes chr3R 20848498 intergenic not near genes chr3R_9_20845001 chr3R_20845001 RAL-109_125b 3370 chr3R 20850045 20850098 chr3R 20850180 20850233 11 135 0.0 6.0 3.0 2.8 188 chr3R 20850045 intergenic RpS30 + chr3R 20850139 intergenic RpS30 + chr3R 20850233 intergenic RpS30 + chr3R_11_20850001 chr3R_20850001 RAL-109_125b 3371 chr3R 20854456 20854478 chr3R 20859282 20859318 Doc 13 4830 9.0 6.0 7.5 1.5 4862 chr3R 20854456 intron Ir93a - chr3R 20856887 intron Ir93a - chr3R 20859318 exon Ir93a - chr3R_13_20855001 chr3R_20855001 RAL-109_125b 3372 chr3R 20854482 20854504 chr3R 20859278 20859344 Doc 7 4834 5.5 6.0 5.8 1.0 4862 chr3R 20854482 intron Ir93a - chr3R 20856913 intron Ir93a - chr3R 20859344 exon Ir93a - chr3R_7_20855001 chr3R_20855001 RAL-109_125b 3373 chr3R 20865291 20865317 chr3R 20865419 20865446 11 129 2.0 14.5 8.2 1.2 155 chr3R 20865291 intron CG3822 - chr3R 20865368 intron CG3822 - chr3R 20865446 intron CG3822 - chr3R_11_20865001 chr3R_20865001 RAL-109_125b 3374 chr3R 20942158 20942212 chr3R 20942314 20942366 8 156 0.0 12.5 6.2 1.1 208 chr3R 20942158 intron CG31191 - chr3R 20942262 intron CG31191 - chr3R 20942366 intron CG31191 - chr3R_8_20940001 chr3R_20940001 RAL-109_125b 3375 chr3R 21041051 21041055 chr3R 21041254 21041258 5 203 27.0 8.5 17.8 0.3 207 chr3R 21041051 exon Dhc93AB - chr3R 21041154 intron Dhc93AB - chr3R 21041258 intron Dhc93AB - chr3R_5_21040001 chr3R_21040001 RAL-109_125b 3376 chr3R 21041056 21041125 chr3R 21041253 21041328 27 200 10.0 8.5 9.2 2.6 272 chr3R 21041056 exon Dhc93AB - chr3R 21041192 intron Dhc93AB - chr3R 21041328 intron Dhc93AB - chr3R_27_21040001 chr3R_21040001 RAL-109_125b 3377 chr3R 21107988 21108066 chr3R 21108299 21108377 13 308 6.0 5.0 5.5 2.0 389 chr3R 21107988 intergenic Sec15 -,rtet + chr3R 21108182 intergenic Sec15 -,rtet + chr3R 21108377 intergenic rtet +,Sec15 - chr3R_13_21105001 chr3R_21105001 RAL-109_125b 3378 chr3R 21132582 21132632 chr3R 21132714 21132765 15 131 7.0 0.0 3.5 3.3 183 chr3R 21132582 3` UTR Ice2 + chr3R 21132674 3` UTR Ice2 + chr3R 21132765 exon CG7009 - chr3R_15_21130001 chr3R_21130001 RAL-109_125b 3379 chr3R 21141628 21141707 chr3R 21150159 21150211 Tirant 14 8517 5.0 1.5 3.2 3.3 8583 chr3R 21141628 intron SNF4Agamma + chr3R 21145920 intron SNF4Agamma + chr3R 21150211 intron SNF4Agamma + chr3R_14_21145001 chr3R_21145001 RAL-109_125b 3380 chr3R 21150755 21150835 chr3R 21150940 21151020 20 183 6.0 8.0 7.0 2.5 265 chr3R 21150755 intron SNF4Agamma + chr3R 21150888 intron SNF4Agamma + chr3R 21151020 intron SNF4Agamma + chr3R_20_21150001 chr3R_21150001 RAL-109_125b 3381 chr3R 21154521 21154584 chr3R 21154785 21154849 26 263 6.5 6.5 6.5 3.5 328 chr3R 21154521 intron SNF4Agamma + chr3R 21154685 intron SNF4Agamma + chr3R 21154849 intron SNF4Agamma + chr3R_26_21150001 chr3R_21150001 RAL-109_125b 3382 chr3R 21177262 21177278 chr3R 21177396 21177412 9 134 6.5 0.0 3.2 2.1 150 chr3R 21177262 intron SNF4Agamma + chr3R 21177337 intron SNF4Agamma + chr3R 21177412 intron SNF4Agamma + chr3R_9_21175001 chr3R_21175001 RAL-109_125b 3383 chr3R 21183198 21183470 chr3R 21183326 21183613 53 136 8.0 8.0 8.0 5.9 415 chr3R 21183198 intron SNF4Agamma + chr3R 21183406 intron SNF4Agamma + chr3R 21183613 intron SNF4Agamma + chr3R_53_21180001 chr3R_21180001 RAL-109_125b 3384 chr3R 21214701 21214764 chr3R 21214923 21214986 12 222 5.0 7.5 6.2 1.7 285 chr3R 21214701 intergenic CG5862 + chr3R 21214844 intergenic CG5862 + chr3R 21214986 intergenic CG5862 + chr3R_12_21210001 chr3R_21210001 RAL-109_125b 3385 chr3R 21239762 21239954 chr3R 21239906 21240071 14 128 0.5 0.0 0.2 11.7 309 chr3R 21239762 intergenic not near genes chr3R 21239916 intergenic not near genes chr3R 21240071 intergenic not near genes chr3R_14_21235001 chr3R_21235001 RAL-109_125b 3386 chr3R 21240752 21240767 chr3R 21240899 21240899 5 143 2.0 0.0 1.0 2.5 147 chr3R 21240752 intergenic not near genes chr3R 21240826 intergenic not near genes chr3R 21240899 intergenic not near genes chr3R_5_21240001 chr3R_21240001 RAL-109_125b 3387 chr3R 21322925 21322943 chr3R 21323054 21323072 6 129 9.0 4.5 6.8 0.8 147 chr3R 21322925 exon CG16791 - chr3R 21322998 intron CG16791 - chr3R 21323072 intron CG16791 - chr3R_6_21320001 chr3R_21320001 RAL-109_125b 3388 chr3R 21322947 21323002 chr3R 21323053 21323128 9 117 4.0 4.5 4.2 1.7 181 chr3R 21322947 exon CG16791 - chr3R 21323038 intron CG16791 - chr3R 21323128 intron CG16791 - chr3R_9_21320001 chr3R_21320001 RAL-109_125b 3389 chr3R 21330316 21330385 chr3R 21330457 21330503 23 140 3.5 6.5 5.0 3.8 187 chr3R 21330316 intron CG16791 - chr3R 21330410 intron CG16791 - chr3R 21330503 intron CG16791 - chr3R_23_21330001 chr3R_21330001 RAL-109_125b 3390 chr3R 21385882 21385913 chr3R 21386009 21386025 8 120 12.5 7.5 10.0 0.7 143 chr3R 21385882 intergenic not near genes chr3R 21385954 intergenic not near genes chr3R 21386025 intergenic not near genes chr3R_8_21385001 chr3R_21385001 RAL-109_125b 3391 chr3R 21432902 21432974 chr3R 21433030 21433102 21 125 8.0 8.5 8.2 2.3 200 chr3R 21432902 intron lbl - chr3R 21433002 intron lbl - chr3R 21433102 intron lbl - chr3R_21_21430001 chr3R_21430001 RAL-109_125b 3392 chr3R 21460988 21461004 chr3R 21461128 21461135 8 139 7.5 0.0 3.8 1.7 147 chr3R 21460988 intergenic not near genes chr3R 21461062 intergenic not near genes chr3R 21461135 intergenic not near genes chr3R_8_21460001 chr3R_21460001 RAL-109_125b 3393 chr3R 21464352 21464426 chr3R 21464488 21464560 6 135 6.5 1.5 4.0 1.2 208 chr3R 21464352 intergenic not near genes chr3R 21464456 intergenic not near genes chr3R 21464560 intergenic not near genes chr3R_6_21460001 chr3R_21460001 RAL-109_125b 3394 chr3R 21471971 21472028 chr3R 21472102 21472159 14 130 11.0 9.0 10.0 1.3 188 chr3R 21471971 intergenic not near genes chr3R 21472065 intergenic not near genes chr3R 21472159 intergenic not near genes chr3R_14_21470001 chr3R_21470001 RAL-109_125b 3395 chr3R 21474326 21474401 chr3R 21474481 21474524 24 146 8.0 6.0 7.0 3.0 198 chr3R 21474326 intergenic not near genes chr3R 21474425 intergenic not near genes chr3R 21474524 intergenic not near genes chr3R_24_21470001 chr3R_21470001 RAL-109_125b 3396 chr3R 21475950 21476020 chr3R 21476083 21476158 32 131 10.0 7.5 8.8 3.3 208 chr3R 21475950 intergenic not near genes chr3R 21476054 intergenic not near genes chr3R 21476158 intergenic not near genes chr3R_32_21475001 chr3R_21475001 RAL-109_125b 3397 chr3R 21517980 21518272 chr3R 21518159 21518400 18 145 0.0 0.0 0.0 18.0 420 chr3R 21517980 intergenic not near genes chr3R 21518190 intergenic not near genes chr3R 21518400 intergenic not near genes chr3R_18_21515001 chr3R_21515001 RAL-109_125b 3398 chr3R 21519960 21520124 chr3R 21520111 21520268 27 151 0.0 0.0 0.0 27.0 308 chr3R 21519960 intergenic not near genes chr3R 21520114 intergenic not near genes chr3R 21520268 intergenic not near genes chr3R_27_21520001 chr3R_21520001 RAL-109_125b 3399 chr3R 21527766 21527841 chr3R 21528156 21528231 35 387 7.0 6.5 6.8 4.5 465 chr3R 21527766 3` UTR CG7956 + chr3R 21527998 3` UTR CG7956 + chr3R 21528231 3` UTR CG7956 + chr3R_35_21525001 chr3R_21525001 RAL-109_125b 3400 chr3R 21595549 21595581 chr3R 21595696 21595711 8 138 6.5 0.0 3.2 1.9 162 chr3R 21595549 intron InR - chr3R 21595630 intron InR - chr3R 21595711 intron InR - chr3R_8_21595001 chr3R_21595001 RAL-109_125b 3401 chr3R 21708307 21708368 chr3R 21708473 21708507 21 162 8.0 3.5 5.8 3.1 200 chr3R 21708307 intron CG31176 - chr3R 21708407 intron CG31176 - chr3R 21708507 intron CG31176 - chr3R_21_21705001 chr3R_21705001 RAL-109_125b 3402 chr3R 21725642 21725677 chr3R 21725828 21725862 5 184 0.0 10.0 5.0 0.8 220 chr3R 21725642 intergenic not near genes chr3R 21725752 intergenic not near genes chr3R 21725862 intergenic not near genes chr3R_5_21725001 chr3R_21725001 RAL-109_125b 3403 chr3R 21731751 21731808 chr3R 21731909 21731965 5 158 10.0 0.0 5.0 0.8 214 chr3R 21731751 intergenic not near genes chr3R 21731858 intergenic not near genes chr3R 21731965 intergenic not near genes chr3R_5_21730001 chr3R_21730001 RAL-109_125b 3404 chr3R 21733950 21733957 chr3R 21734103 21734110 5 153 2.0 7.0 4.5 0.9 160 chr3R 21733950 intergenic not near genes chr3R 21734030 intergenic not near genes chr3R 21734110 intergenic not near genes chr3R_5_21730001 chr3R_21730001 RAL-109_125b 3405 chr3R 21761080 21761105 chr3R 21768522 21768547 mdg1 10 7440 13.5 7.0 10.2 0.9 7467 chr3R 21761080 exon CG42335 + chr3R 21764814 intron CG42335 + chr3R 21768547 exon CG42335 + chr3R_10_21760001 chr3R_21760001 RAL-109_125b 3406 chr3R 21761106 21761151 chr3R 21768516 21768529 mdg1 12 7430 4.0 6.0 5.0 2.0 7423 chr3R 21761106 exon CG42335 + chr3R 21764818 intron CG42335 + chr3R 21768529 exon CG42335 + chr3R_12_21760001 chr3R_21760001 RAL-109_125b 3407 chr3R 21784811 21784890 chr3R 21784959 21785028 9 146 7.5 5.5 6.5 1.2 217 chr3R 21784811 3` UTR,3` UTR CASK -,CRG - chr3R 21784920 3` UTR,3` UTR CASK -,CRG - chr3R 21785028 3` UTR,3` UTR CASK -,CRG - chr3R_9_21780001 chr3R_21780001 RAL-109_125b 3408 chr3R 21785940 21786004 chr3R 21786062 21786136 26 131 10.5 9.0 9.8 2.4 196 chr3R 21785940 3` UTR,3` UTR CASK -,CRG - chr3R 21786038 3` UTR,3` UTR CASK -,CRG - chr3R 21786136 3` UTR,3` UTR CASK -,CRG - chr3R_26_21785001 chr3R_21785001 RAL-109_125b 3409 chr3R 21878246 21878277 chr3R 21878384 21878415 13 134 19.5 18.0 18.8 0.7 169 chr3R 21878246 exon,5` UTR CG34148 -,P5CDh2 + chr3R 21878330 exon,intron CG34148 -,P5CDh2 + chr3R 21878415 exon,5` UTR CG34148 -,P5CDh2 + chr3R_13_21875001 chr3R_21875001 RAL-109_125b 3410 chr3R 21878278 21878311 chr3R 21878377 21878445 18 127 13.0 14.0 13.5 1.2 167 chr3R 21878278 exon,5` UTR CG34148 -,P5CDh2 + chr3R 21878362 exon,intron CG34148 -,P5CDh2 + chr3R 21878445 intron,5` UTR CG34148 -,P5CDh2 + chr3R_18_21875001 chr3R_21875001 RAL-109_125b 3411 chr3R 21903620 21903635 chr3R 21903767 21903782 9 147 0.0 11.0 5.5 1.4 162 chr3R 21903620 intron CG6678 + chr3R 21903701 intron CG6678 + chr3R 21903782 intron CG6678 + chr3R_9_21900001 chr3R_21900001 RAL-109_125b 3412 chr3R 21907534 21907534 chr3R 28831801 28831802 21 6924268 35.0 21.0 28.0 0.7 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_21_25365001 chr3R_25365001 RAL-109_125b 3413 chr3R 8339244 8339247 chr3R 21907535 21907535 13 13568289 36.0 36.5 36.2 0.3 13568291 chr3R 8339244 intergenic not near genes chr3R 15123390 intron CG42788 - chr3R 21907535 intergenic CG6678 + chr3R_13_15120001 chr3R_15120001 RAL-109_125b 3414 chr3R 9620956 9620956 chr3R 21907535 21907535 4 12286579 36.0 36.5 36.2 0.1 12286579 chr3R 9620956 intron CG8312 + chr3R 15764246 intergenic not near genes chr3R 21907535 intergenic CG6678 + chr3R_4_15760001 chr3R_15760001 RAL-109_125b 3415 chr3R 21907535 21907535 chr3R 28831801 28831802 32 6924266 34.0 21.0 27.5 1.1 6924267 chr3R 21907535 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_32_25365001 chr3R_25365001 RAL-109_125b 3416 chr3R 21907536 21907536 chr3R 26659333 26659337 4 4751798 34.5 31.5 33.0 0.1 4751801 chr3R 21907536 intergenic CG6678 + chr3R 24283436 intergenic CR45662 - chr3R 26659337 intron beat-VII - chr3R_4_24280001 chr3R_24280001 RAL-109_125b 3417 chr3R 21907536 21907536 chr3R 28831801 28831802 59 6924266 34.5 21.0 27.8 2.0 6924266 chr3R 21907536 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831802 intron WASp - chr3R_59_25365001 chr3R_25365001 RAL-109_125b 3418 chr3R 21937179 21937234 chr3R 21937306 21937361 22 127 7.0 13.0 10.0 2.0 182 chr3R 21937179 intergenic not near genes chr3R 21937270 intergenic not near genes chr3R 21937361 intergenic not near genes chr3R_22_21935001 chr3R_21935001 RAL-109_125b 3419 chr3R 22084570 22084626 chr3R 22084709 22084765 11 139 3.5 11.0 7.2 1.3 195 chr3R 22084570 intergenic not near genes chr3R 22084668 intergenic not near genes chr3R 22084765 intergenic not near genes chr3R_11_22080001 chr3R_22080001 RAL-109_125b 3420 chr3R 22142172 22142227 chr3R 22142300 22142355 11 128 2.0 4.5 3.2 2.6 183 chr3R 22142172 intron SKIP + chr3R 22142264 intron SKIP + chr3R 22142355 intron SKIP + chr3R_11_22140001 chr3R_22140001 RAL-109_125b 3421 chr3R 22220635 22220668 chr3R 22220788 22220820 13 152 2.0 3.5 2.8 3.4 185 chr3R 22220635 intron SKIP + chr3R 22220728 intron SKIP + chr3R 22220820 intron SKIP + chr3R_13_22220001 chr3R_22220001 RAL-109_125b 3422 chr3R 22220670 22220682 chr3R 22220772 22220817 4 134 2.0 2.5 2.2 1.2 147 chr3R 22220670 intron SKIP + chr3R 22220744 intron SKIP + chr3R 22220817 intron SKIP + chr3R_4_22220001 chr3R_22220001 RAL-109_125b 3423 chr3R 22239452 22239524 chr3R 22248562 22248622 roo 16 9096 6.0 0.0 3.0 4.0 9170 chr3R 22239452 intron SKIP + chr3R 22244037 intron SKIP + chr3R 22248622 intron SKIP + chr3R_16_22240001 chr3R_22240001 RAL-109_125b 3424 chr3R 22248600 22248639 chr3R 22248736 22248774 17 135 0.5 0.5 0.5 11.3 174 chr3R 22248600 intron SKIP + chr3R 22248687 intron SKIP + chr3R 22248774 intron SKIP + chr3R_17_22245001 chr3R_22245001 RAL-109_125b 3425 chr3R 22330611 22330614 chr3R 22332266 22332272 4 1658 45.5 57.0 51.2 0.1 1661 chr3R 22330611 intergenic CG7080 +,CG33721 + chr3R 22331442 exon CG33721 + chr3R 22332272 exon CG13862 + chr3R_4_22330001 chr3R_22330001 RAL-109_125b 3426 chr3R 22330608 22330644 chr3R 22332273 22332338 16 1668 49.5 54.0 51.8 0.3 1730 chr3R 22330608 intergenic CG7080 +,CG33721 + chr3R 22331473 exon CG33721 + chr3R 22332338 exon CG13862 + chr3R_16_22330001 chr3R_22330001 RAL-109_125b 3427 chr3R 22336894 22336927 chr3R 22337026 22337059 8 132 4.0 3.5 3.8 1.7 165 chr3R 22336894 intron CG5388 - chr3R 22336976 intron CG5388 - chr3R 22337059 intron CG5388 - chr3R_8_22335001 chr3R_22335001 RAL-109_125b 3428 chr3R 22346142 22346213 chr3R 22346278 22346346 18 130 3.5 5.5 4.5 3.3 204 chr3R 22346142 intergenic not near genes chr3R 22346244 intergenic not near genes chr3R 22346346 intergenic not near genes chr3R_18_22345001 chr3R_22345001 RAL-109_125b 3429 chr3R 22433055 22433065 chr3R 22433205 22433215 5 150 19.5 12.0 15.8 0.3 160 chr3R 22433055 intron CG13847 - chr3R 22433135 intron CG13847 - chr3R 22433215 intron CG13847 - chr3R_5_22430001 chr3R_22430001 RAL-109_125b 3430 chr3R 22433074 22433087 chr3R 22433203 22433219 5 140 15.5 11.5 13.5 0.3 145 chr3R 22433074 intron CG13847 - chr3R 22433146 intron CG13847 - chr3R 22433219 intron CG13847 - chr3R_5_22430001 chr3R_22430001 RAL-109_125b 3431 chr3R 22450495 22450574 chr3R 22453185 22453238 NOF 36 2687 7.5 8.5 8.0 4.0 2743 chr3R 22450495 intron CG34376 + chr3R 22451866 intron CG34376 + chr3R 22453238 intron CG34376 + chr3R_36_22450001 chr3R_22450001 RAL-109_125b 3432 chr3R 22507744 22507819 chr3R 22507878 22507886 26 122 6.5 9.5 8.0 2.9 142 chr3R 22507744 intron Octbeta1R + chr3R 22507815 intron Octbeta1R + chr3R 22507886 intron Octbeta1R + chr3R_26_22505001 chr3R_22505001 RAL-109_125b 3433 chr3R 22591838 22591894 chr3R 22591981 22592007 12 137 3.5 7.0 5.2 1.9 169 chr3R 22591838 intron Efa6 + chr3R 22591922 intron Efa6 + chr3R 22592007 intron Efa6 + chr3R_12_22590001 chr3R_22590001 RAL-109_125b 3434 chr3R 22672253 22672326 chr3R 22672396 22672469 23 142 5.5 6.0 5.8 3.4 216 chr3R 22672253 intron wake + chr3R 22672361 intron wake + chr3R 22672469 intron wake + chr3R_23_22670001 chr3R_22670001 RAL-109_125b 3435 chr3R 22673657 22673729 chr3R 22673802 22673874 21 144 6.5 6.5 6.5 2.8 217 chr3R 22673657 intron wake + chr3R 22673766 intron wake + chr3R 22673874 intron wake + chr3R_21_22670001 chr3R_22670001 RAL-109_125b 3436 chr3R 22727963 22728030 chr3R 22728152 22728214 18 185 3.0 7.5 5.2 2.9 251 chr3R 22727963 intron CG45049 + chr3R 22728088 intron CG45049 + chr3R 22728214 intron CG45049 + chr3R_18_22725001 chr3R_22725001 RAL-109_125b 3437 chr3R 22797718 22797928 chr3R 22797854 22798074 32 137 0.0 0.0 0.0 32.0 356 chr3R 22797718 intergenic not near genes chr3R 22797896 intergenic not near genes chr3R 22798074 intergenic not near genes chr3R_32_22795001 chr3R_22795001 RAL-109_125b 3438 chr3R 22848007 22848058 chr3R 22848399 22848457 6 390 20.0 30.5 25.2 0.2 450 chr3R 22848007 intergenic not near genes chr3R 22848232 intergenic not near genes chr3R 22848457 intergenic not near genes chr3R_6_22845001 chr3R_22845001 RAL-109_125b 3439 chr3R 22853247 22853298 chr3R 22853369 22853419 18 120 14.0 9.0 11.5 1.4 172 chr3R 22853247 intergenic not near genes chr3R 22853333 intergenic not near genes chr3R 22853419 intergenic not near genes chr3R_18_22850001 chr3R_22850001 RAL-109_125b 3440 chr3R 22880883 22880949 chr3R 22881071 22881137 21 187 8.5 9.0 8.8 2.1 254 chr3R 22880883 intergenic not near genes chr3R 22881010 intergenic not near genes chr3R 22881137 intergenic not near genes chr3R_21_22880001 chr3R_22880001 RAL-109_125b 3441 chr3R 22881205 22881220 chr3R 22884912 22884976 Doc 4 3744 7.5 7.5 7.5 0.5 3771 chr3R 22881205 intergenic not near genes chr3R 22883090 intergenic not near genes chr3R 22884976 intergenic not near genes chr3R_4_22880001 chr3R_22880001 RAL-109_125b 3442 chr3R 22950291 22950366 chr3R 22950713 22950788 26 420 7.5 5.5 6.5 3.5 497 chr3R 22950291 intron klg + chr3R 22950540 intron klg + chr3R 22950788 intron klg + chr3R_26_22950001 chr3R_22950001 RAL-109_125b 3443 chr3R 22974268 22974285 chr3R 22974402 22974419 7 133 0.0 12.0 6.0 1.0 151 chr3R 22974268 intergenic not near genes chr3R 22974344 intergenic not near genes chr3R 22974419 intergenic not near genes chr3R_7_22970001 chr3R_22970001 RAL-109_125b 3444 chr3R 22974288 22974311 chr3R 22974387 22974445 9 127 0.0 9.5 4.8 1.6 157 chr3R 22974288 intergenic not near genes chr3R 22974366 intergenic not near genes chr3R 22974445 intergenic not near genes chr3R_9_22970001 chr3R_22970001 RAL-109_125b 3445 chr3R 22978373 22978393 chr3R 22978516 22978533 4 143 6.0 18.5 12.2 0.3 160 chr3R 22978373 intergenic CG17244 + chr3R 22978453 intergenic CG17244 + chr3R 22978533 intergenic CG17244 + chr3R_4_22975001 chr3R_22975001 RAL-109_125b 3446 chr3R 22979709 22979780 chr3R 22979840 22979898 24 125 5.5 8.0 6.8 3.1 189 chr3R 22979709 intergenic not near genes chr3R 22979804 intergenic not near genes chr3R 22979898 intergenic not near genes chr3R_24_22975001 chr3R_22975001 RAL-109_125b 3447 chr3R 23064128 23064142 chr3R 23064287 23064301 5 159 14.0 9.0 11.5 0.4 173 chr3R 23064128 exon CG17111 - chr3R 23064214 exon CG17111 - chr3R 23064301 exon CG17111 - chr3R_5_23060001 chr3R_23060001 RAL-109_125b 3448 chr3R 23064151 23064198 chr3R 23064284 23064343 28 146 3.5 9.0 6.2 3.9 192 chr3R 23064151 exon CG17111 - chr3R 23064247 intron CG17111 - chr3R 23064343 exon CG17111 - chr3R_28_23060001 chr3R_23060001 RAL-109_125b 3449 chr3R 23064830 23064892 chr3R 23064981 23065033 13 143 0.0 8.0 4.0 2.6 203 chr3R 23064830 intron CG17111 - chr3R 23064932 intron CG17111 - chr3R 23065033 intron CG17111 - chr3R_13_23060001 chr3R_23060001 RAL-109_125b 3450 chr3R 23073622 23073689 chr3R 23073760 23073793 17 131 7.0 4.5 5.8 2.5 171 chr3R 23073622 intron CG13830 - chr3R 23073708 intron CG13830 - chr3R 23073793 intron CG13830 - chr3R_17_23070001 chr3R_23070001 RAL-109_125b 3451 chr3R 23197910 23197981 chr3R 23198039 23198110 17 129 2.5 3.0 2.8 4.5 200 chr3R 23197910 exon cnc - chr3R 23198010 intron cnc - chr3R 23198110 intron cnc - chr3R_17_23195001 chr3R_23195001 RAL-109_125b 3452 chr3R 23234800 23234841 chr3R 23234927 23234968 18 127 6.5 11.0 8.8 1.8 168 chr3R 23234800 intron CG4467 - chr3R 23234884 intron CG4467 - chr3R 23234968 intron CG4467 - chr3R_18_23230001 chr3R_23230001 RAL-109_125b 3453 chr3R 23242247 23242323 chr3R 23242376 23242453 26 116 7.5 12.5 10.0 2.4 206 chr3R 23242247 intron CG4467 - chr3R 23242350 intron CG4467 - chr3R 23242453 intron CG4467 - chr3R_26_23240001 chr3R_23240001 RAL-109_125b 3454 chr3R 23245950 23245959 chr3R 23246076 23246091 4 130 20.5 7.0 13.8 0.3 141 chr3R 23245950 intron CG4467 - chr3R 23246020 intron CG4467 - chr3R 23246091 intron CG4467 - chr3R_4_23245001 chr3R_23245001 RAL-109_125b 3455 chr3R 23245961 23246022 chr3R 23246075 23246122 20 120 8.0 7.0 7.5 2.4 161 chr3R 23245961 intron CG4467 - chr3R 23246042 intron CG4467 - chr3R 23246122 intron CG4467 - chr3R_20_23245001 chr3R_23245001 RAL-109_125b 3456 chr3R 23260913 23260931 chr3R 23261045 23261063 13 132 20.5 5.5 13.0 0.9 150 chr3R 23260913 3` UTR orb - chr3R 23260988 3` UTR orb - chr3R 23261063 3` UTR orb - chr3R_13_23260001 chr3R_23260001 RAL-109_125b 3457 chr3R 23260934 23260986 chr3R 23261044 23261116 14 123 12.0 5.5 8.8 1.4 182 chr3R 23260934 3` UTR orb - chr3R 23261025 3` UTR orb - chr3R 23261116 3` UTR orb - chr3R_14_23260001 chr3R_23260001 RAL-109_125b 3458 chr3R 23291226 23291275 chr3R 23291339 23291411 24 124 6.0 6.0 6.0 3.4 185 chr3R 23291226 3` UTR pnt - chr3R 23291318 3` UTR pnt - chr3R 23291411 exon pnt - chr3R_24_23290001 chr3R_23290001 RAL-109_125b 3459 chr3R 23318356 23318395 chr3R 23318492 23318552 8 149 1.0 5.5 3.2 1.9 196 chr3R 23318356 intron pnt - chr3R 23318454 intron pnt - chr3R 23318552 intron pnt - chr3R_8_23315001 chr3R_23315001 RAL-109_125b 3460 chr3R 23335395 23335466 chr3R 23335523 23335539 15 121 8.5 5.5 7.0 1.9 144 chr3R 23335395 intron pnt - chr3R 23335467 intron pnt - chr3R 23335539 intron pnt - chr3R_15_23335001 chr3R_23335001 RAL-109_125b 3461 chr3R 23346800 23346860 chr3R 23346928 23346988 8 128 5.0 5.0 5.0 1.3 188 chr3R 23346800 intergenic not near genes chr3R 23346894 intergenic not near genes chr3R 23346988 intergenic not near genes chr3R_8_23345001 chr3R_23345001 RAL-109_125b 3462 chr3R 23356979 23357011 chr3R 23357105 23357147 7 134 10.0 3.0 6.5 0.9 168 chr3R 23356979 intron Sec13 + chr3R 23357063 intron Sec13 + chr3R 23357147 intron Sec13 + chr3R_7_23355001 chr3R_23355001 RAL-109_125b 3463 chr3R 23390920 23390952 chr3R 23391052 23391081 5 130 5.0 5.0 5.0 0.8 161 chr3R 23390920 intergenic CR43387 + chr3R 23391000 intergenic CR43387 + chr3R 23391081 intergenic not near genes chr3R_5_23390001 chr3R_23390001 RAL-109_125b 3464 chr3R 23397049 23397056 chr3R 23397208 23397217 4 160 18.0 6.5 12.2 0.3 168 chr3R 23397049 intergenic not near genes chr3R 23397133 intergenic not near genes chr3R 23397217 intergenic not near genes chr3R_4_23395001 chr3R_23395001 RAL-109_125b 3465 chr3R 23397057 23397118 chr3R 23397203 23397269 24 153 9.0 6.5 7.8 2.7 212 chr3R 23397057 intergenic not near genes chr3R 23397163 intergenic not near genes chr3R 23397269 intergenic not near genes chr3R_24_23395001 chr3R_23395001 RAL-109_125b 3466 chr3R 23453645 23453707 chr3R 23453774 23453806 19 124 10.0 12.5 11.2 1.6 161 chr3R 23453645 intron CG4374 - chr3R 23453726 intron CG4374 - chr3R 23453806 intron CG4374 - chr3R_19_23450001 chr3R_23450001 RAL-109_125b 3467 chr3R 23501671 23501684 chr3R 23502004 23502017 6 333 19.0 6.5 12.8 0.4 346 chr3R 23501671 intergenic not near genes chr3R 23501844 intergenic not near genes chr3R 23502017 intergenic not near genes chr3R_6_23500001 chr3R_23500001 RAL-109_125b 3468 chr3R 23501690 23501736 chr3R 23502002 23502059 18 329 10.0 6.5 8.2 2.0 369 chr3R 23501690 intergenic not near genes chr3R 23501874 intergenic not near genes chr3R 23502059 intergenic not near genes chr3R_18_23500001 chr3R_23500001 RAL-109_125b 3469 chr3R 23515523 23515533 chr3R 23516734 23516744 1360 4 1211 5.5 0.0 2.8 1.1 1221 chr3R 23515523 intron Irk2 - chr3R 23516134 intron Irk2 - chr3R 23516744 intron Irk2 - chr3R_4_23515001 chr3R_23515001 RAL-109_125b 3470 chr3R 23558349 23558423 chr3R 23560180 23560254 Bari1 29 1830 8.5 5.5 7.0 3.6 1905 chr3R 23558349 intron beat-IV + chr3R 23559302 intron beat-IV + chr3R 23560254 intron beat-IV + chr3R_29_23555001 chr3R_23555001 RAL-109_125b 3471 chr3R 23564396 23564468 chr3R 23564590 23564662 27 193 10.5 6.0 8.2 2.9 266 chr3R 23564396 intron beat-IV + chr3R 23564529 intron beat-IV + chr3R 23564662 intron beat-IV + chr3R_27_23560001 chr3R_23560001 RAL-109_125b 3472 chr3R 23582788 23582815 chr3R 23582885 23582910 8 108 6.5 0.5 3.5 1.8 122 chr3R 23582788 intergenic not near genes chr3R 23582849 intergenic not near genes chr3R 23582910 intergenic not near genes chr3R_8_23580001 chr3R_23580001 RAL-109_125b 3473 chr3R 23677160 23677194 chr3R 23677277 23677287 7 122 8.0 12.5 10.2 0.6 127 chr3R 23677160 intergenic CG13822 + chr3R 23677224 intergenic CG13822 + chr3R 23677287 intergenic CG13822 + chr3R_7_23675001 chr3R_23675001 RAL-109_125b 3474 chr3R 23684664 23684696 chr3R 23685181 23685232 roo 13 523 13.0 5.5 9.2 1.3 568 chr3R 23684664 exon CG18754 + chr3R 23684948 intron CG18754 + chr3R 23685232 exon CG18754 + chr3R_13_23680001 chr3R_23680001 RAL-109_125b 3475 chr3R 23698816 23698863 chr3R 23698906 23698923 18 95 7.5 8.5 8.0 2.0 107 chr3R 23698816 exon prt - chr3R 23698870 exon prt - chr3R 23698923 5` UTR prt - chr3R_18_23695001 chr3R_23695001 RAL-109_125b 3476 chr3R 23835380 23835429 chr3R 23844569 23844627 roo 6 9196 10.0 0.5 5.2 1.0 9247 chr3R 23835380 intron CG34355 + chr3R 23840004 intron CG34355 + chr3R 23844627 intron CG34355 + chr3R_6_23840001 chr3R_23840001 RAL-109_125b 3477 chr3R 23851038 23851076 chr3R 23858755 23858793 opus 11 7717 11.0 16.0 13.5 0.8 7755 chr3R 23851038 3` UTR CG34355 + chr3R 23854916 intergenic not near genes chr3R 23858793 intergenic not near genes chr3R_11_23850001 chr3R_23850001 RAL-109_125b 3478 chr3R 23873935 23873966 chr3R 23874068 23874079 5 124 20.5 22.0 21.2 0.2 144 chr3R 23873935 intron Pli - chr3R 23874007 intron Pli - chr3R 23874079 intron Pli - chr3R_5_23870001 chr3R_23870001 RAL-109_125b 3479 chr3R 23888043 23888106 chr3R 23888174 23888242 25 136 11.0 10.0 10.5 2.2 199 chr3R 23888043 intron Pli - chr3R 23888142 intron Pli - chr3R 23888242 intron Pli - chr3R_25_23885001 chr3R_23885001 RAL-109_125b 3480 chr3R 23937567 23937633 chr3R 23937715 23937769 23 145 8.0 10.0 9.0 2.3 202 chr3R 23937567 exon Gdh - chr3R 23937668 intron Gdh - chr3R 23937769 exon Gdh - chr3R_23_23935001 chr3R_23935001 RAL-109_125b 3481 chr3R 24072061 24072122 chr3R 24072528 24072600 jockey 13 479 5.0 0.0 2.5 3.7 539 chr3R 24072061 intron 4EHP - chr3R 24072330 intron 4EHP - chr3R 24072600 intron 4EHP - chr3R_13_24070001 chr3R_24070001 RAL-109_125b 3482 chr3R 24076882 24076910 chr3R 24078399 24078427 hobo 12 1516 7.5 12.0 9.8 1.1 1545 chr3R 24076882 intron 4EHP - chr3R 24077654 intron 4EHP - chr3R 24078427 intron 4EHP - chr3R_12_24075001 chr3R_24075001 RAL-109_125b 3483 chr3R 24076925 24076940 chr3R 24078391 24078457 hobo 5 1507 7.0 10.0 8.5 0.5 1532 chr3R 24076925 intron 4EHP - chr3R 24077691 intron 4EHP - chr3R 24078457 intron 4EHP - chr3R_5_24075001 chr3R_24075001 RAL-109_125b 3484 chr3R 24100408 24100578 chr3R 24100553 24100852 30 200 0.0 0.0 0.0 30.0 444 chr3R 24100408 intron 4EHP - chr3R 24100630 intron 4EHP - chr3R 24100852 intron 4EHP - chr3R_30_24100001 chr3R_24100001 RAL-109_125b 3485 chr3R 24100583 24100612 chr3R 24100857 24100886 13 274 0.0 19.5 9.8 1.2 303 chr3R 24100583 intron 4EHP - chr3R 24100734 intron 4EHP - chr3R 24100886 intron 4EHP - chr3R_13_24100001 chr3R_24100001 RAL-109_125b 3486 chr3R 24186085 24186157 chr3R 24186227 24186300 16 138 5.5 7.0 6.2 2.2 215 chr3R 24186085 intergenic CHORD + chr3R 24186192 intergenic CHORD + chr3R 24186300 intergenic CHORD + chr3R_16_24185001 chr3R_24185001 RAL-109_125b 3487 chr3R 24199691 24199769 chr3R 24199821 24199868 25 127 6.5 3.5 5.0 4.2 177 chr3R 24199691 intron twin - chr3R 24199780 intron twin - chr3R 24199868 intron twin - chr3R_25_24195001 chr3R_24195001 RAL-109_125b 3488 chr3R 24207176 24207237 chr3R 24212302 24212363 flea 38 5124 10.0 7.0 8.5 4.0 5187 chr3R 24207176 intron twin - chr3R 24209770 intron twin - chr3R 24212363 intron twin - chr3R_38_24205001 chr3R_24205001 RAL-109_125b 3489 chr3R 21907534 21907535 chr3R 24389465 24389465 4 2481930 34.0 26.0 30.0 0.1 2481931 chr3R 21907534 intergenic CG6678 + chr3R 23148500 intergenic not near genes chr3R 24389465 intron CG5768 - chr3R_4_23145001 chr3R_23145001 RAL-109_125b 3490 chr3R 24447723 24447754 chr3R 24447860 24447891 6 137 4.5 11.5 8.0 0.7 168 chr3R 24447723 intron nAChRalpha1 - chr3R 24447807 intron nAChRalpha1 - chr3R 24447891 intron nAChRalpha1 - chr3R_6_24445001 chr3R_24445001 RAL-109_125b 3491 chr3R 24493236 24493291 chr3R 24493515 24493570 BS 24 278 9.0 12.5 10.8 2.0 334 chr3R 24493236 intergenic not near genes chr3R 24493403 intergenic not near genes chr3R 24493570 intergenic not near genes chr3R_24_24490001 chr3R_24490001 RAL-109_125b 3492 chr3R 24527761 24527826 chr3R 24527902 24527967 32 141 7.5 3.5 5.5 4.9 206 chr3R 24527761 intergenic CG13618 +,CG6607 + chr3R 24527864 intergenic CG6607 +,CG13618 + chr3R 24527967 intergenic CG6607 +,CG13618 + chr3R_32_24525001 chr3R_24525001 RAL-109_125b 3493 chr3R 24594627 24594665 chr3R 24594917 24594955 pogo 9 290 6.5 14.5 10.5 0.8 328 chr3R 24594627 intron mld + chr3R 24594791 intron mld + chr3R 24594955 intron mld + chr3R_9_24590001 chr3R_24590001 RAL-109_125b 3494 chr3R 24635600 24635675 chr3R 24635736 24635811 30 133 7.0 7.0 7.0 3.8 211 chr3R 24635600 3` UTR puf - chr3R 24635706 3` UTR puf - chr3R 24635811 3` UTR puf - chr3R_30_24635001 chr3R_24635001 RAL-109_125b 3495 chr3R 24670125 24670199 chr3R 24670259 24670333 17 134 2.5 6.5 4.5 3.1 208 chr3R 24670125 intron slo + chr3R 24670229 intron slo + chr3R 24670333 intron slo + chr3R_17_24670001 chr3R_24670001 RAL-109_125b 3496 chr3R 24671180 24671227 chr3R 24671301 24671345 4 122 14.0 7.0 10.5 0.3 165 chr3R 24671180 intron slo + chr3R 24671262 intron slo + chr3R 24671345 intron slo + chr3R_4_24670001 chr3R_24670001 RAL-109_125b 3497 chr3R 24671234 24671253 chr3R 24671298 24671380 7 109 10.5 9.0 9.8 0.6 146 chr3R 24671234 intron slo + chr3R 24671307 intron slo + chr3R 24671380 intron slo + chr3R_7_24670001 chr3R_24670001 RAL-109_125b 3498 chr3R 24730055 24730060 chr3R 24732483 24732488 Doc 4 2428 19.5 4.0 11.8 0.3 2433 chr3R 24730055 intron tok + chr3R 24731272 intron tok + chr3R 24732488 intron tok + chr3R_4_24730001 chr3R_24730001 RAL-109_125b 3499 chr3R 24730069 24730113 chr3R 24732475 24732548 Doc 5 2422 7.5 3.5 5.5 0.8 2479 chr3R 24730069 intron tok + chr3R 24731308 intron tok + chr3R 24732548 intron tok + chr3R_5_24730001 chr3R_24730001 RAL-109_125b 3500 chr3R 24742979 24743056 chr3R 24743114 24743188 19 132 5.5 7.0 6.2 2.6 209 chr3R 24742979 intron tok + chr3R 24743084 intron tok + chr3R 24743188 exon tok + chr3R_19_24740001 chr3R_24740001 RAL-109_125b 3501 chr3R 24789934 24790004 chr3R 24790129 24790188 34 192 7.5 6.5 7.0 4.2 254 chr3R 24789934 intron,5` UTR Ets96B +,CG13634 - chr3R 24790061 intron,5` UTR Ets96B +,CG13634 - chr3R 24790188 intron Ets96B + chr3R_34_24790001 chr3R_24790001 RAL-109_125b 3502 chr3R 24854838 24854911 chr3R 24854970 24855043 26 130 5.0 9.5 7.2 3.2 205 chr3R 24854838 3` UTR,3` UTR nct +,HdacX - chr3R 24854940 3` UTR HdacX - chr3R 24855043 3` UTR HdacX - chr3R_26_24850001 chr3R_24850001 RAL-109_125b 3503 chr3R 24927096 24927148 chr3R 24931937 24931973 Doc 23 4836 10.5 11.0 10.8 1.9 4877 chr3R 24927096 intergenic Trf4-2 + chr3R 24929534 intergenic not near genes chr3R 24931973 intergenic CG11771 + chr3R_23_24925001 chr3R_24925001 RAL-109_125b 3504 chr3R 24974862 24974933 chr3R 24974991 24975052 23 128 7.5 8.5 8.0 2.6 190 chr3R 24974862 intergenic not near genes chr3R 24974957 intergenic not near genes chr3R 24975052 intergenic not near genes chr3R_23_24970001 chr3R_24970001 RAL-109_125b 3505 chr3R 25004856 25004865 chr3R 25004989 25004998 5 133 18.0 7.0 12.5 0.4 142 chr3R 25004856 intron tnc + chr3R 25004927 intron tnc + chr3R 25004998 intron tnc + chr3R_5_25000001 chr3R_25000001 RAL-109_125b 3506 chr3R 25004867 25004916 chr3R 25004986 25005049 18 130 7.0 6.5 6.8 2.3 182 chr3R 25004867 intron tnc + chr3R 25004958 intron tnc + chr3R 25005049 intron tnc + chr3R_18_25000001 chr3R_25000001 RAL-109_125b 3507 chr3R 25018226 25018235 chr3R 25018353 25018361 4 124 19.5 15.0 17.2 0.2 135 chr3R 25018226 exon tnc + chr3R 25018294 exon tnc + chr3R 25018361 exon tnc + chr3R_4_25015001 chr3R_25015001 RAL-109_125b 3508 chr3R 25018236 25018290 chr3R 25018338 25018389 24 116 8.0 10.5 9.2 2.4 153 chr3R 25018236 exon tnc + chr3R 25018312 exon tnc + chr3R 25018389 exon tnc + chr3R_24_25015001 chr3R_25015001 RAL-109_125b 3509 chr3R 25027494 25027564 chr3R 25027757 25027827 28 260 6.0 9.0 7.5 3.3 333 chr3R 25027494 intron Hr96 + chr3R 25027660 intron Hr96 + chr3R 25027827 intron Hr96 + chr3R_28_25025001 chr3R_25025001 RAL-109_125b 3510 chr3R 25041519 25041531 chr3R 25041647 25041647 4 125 1.0 16.0 8.5 0.4 128 chr3R 25041519 intron 5PtaseI - chr3R 25041583 intron 5PtaseI - chr3R 25041647 intron 5PtaseI - chr3R_4_25040001 chr3R_25040001 RAL-109_125b 3511 chr3R 25082284 25082304 chr3R 25082416 25082436 8 132 16.5 4.5 10.5 0.7 152 chr3R 25082284 intergenic fd96Ca + chr3R 25082360 intergenic fd96Ca + chr3R 25082436 intergenic fd96Ca + chr3R_8_25080001 chr3R_25080001 RAL-109_125b 3512 chr3R 25082305 25082357 chr3R 25082412 25082442 4 108 8.0 4.5 6.2 0.6 137 chr3R 25082305 intergenic fd96Ca + chr3R 25082374 intergenic fd96Ca + chr3R 25082442 intergenic fd96Ca + chr3R_4_25080001 chr3R_25080001 RAL-109_125b 3513 chr3R 25127614 25127632 chr3R 25127763 25127776 9 149 5.5 1.5 3.5 2.0 162 chr3R 25127614 5` UTR Clbn + chr3R 25127695 intron Clbn + chr3R 25127776 5` UTR Clbn + chr3R_9_25125001 chr3R_25125001 RAL-109_125b 3514 chr3R 25136354 25136421 chr3R 25136484 25136551 21 130 7.0 7.0 7.0 2.6 197 chr3R 25136354 3` UTR Bili + chr3R 25136452 3` UTR Bili + chr3R 25136551 3` UTR Bili + chr3R_21_25135001 chr3R_25135001 RAL-109_125b 3515 chr3R 25159471 25159541 chr3R 25159609 25159656 20 129 3.0 8.0 5.5 3.1 185 chr3R 25159471 intergenic not near genes chr3R 25159564 intergenic not near genes chr3R 25159656 intergenic not near genes chr3R_20_25155001 chr3R_25155001 RAL-109_125b 3516 chr3R 25166207 25166363 chr3R 25166337 25166489 22 128 0.0 0.0 0.0 22.0 282 chr3R 25166207 intergenic not near genes chr3R 25166348 intergenic not near genes chr3R 25166489 intergenic not near genes chr3R_22_25165001 chr3R_25165001 RAL-109_125b 3517 chr3R 25209532 25209624 chr3R 25209677 25209756 13 131 2.5 5.5 4.0 2.6 224 chr3R 25209532 intron CG13654 + chr3R 25209644 intron CG13654 + chr3R 25209756 intron CG13654 + chr3R_13_25205001 chr3R_25205001 RAL-109_125b 3518 chr3R 25268105 25268113 chr3R 25272650 25272652 7 4542 19.5 22.5 21.0 0.3 4547 chr3R 25268105 3` UTR CR45214 - chr3R 25270378 exon,5` UTR CG11889 +,CG11891 + chr3R 25272652 3` UTR,exon CG11889 +,CG11891 + chr3R_7_25270001 chr3R_25270001 RAL-109_125b 3519 chr3R 25280794 25280866 chr3R 25281164 25281223 29 368 8.5 9.5 9.0 2.9 429 chr3R 25280794 intergenic not near genes chr3R 25281008 intergenic not near genes chr3R 25281223 intergenic CG11892 + chr3R_29_25280001 chr3R_25280001 RAL-109_125b 3520 chr3R 25296121 25296197 chr3R 25296252 25296328 32 126 7.5 7.5 7.5 3.8 207 chr3R 25296121 intergenic CG31097 - chr3R 25296224 3` UTR CG31097 - chr3R 25296328 3` UTR CG31097 - chr3R_32_25295001 chr3R_25295001 RAL-109_125b 3521 chr3R 25368426 25368503 chr3R 25368594 25368675 19 169 6.0 0.0 3.0 4.8 249 chr3R 25368426 intron Fur1 - chr3R 25368550 intron Fur1 - chr3R 25368675 intron Fur1 - chr3R_19_25365001 chr3R_25365001 RAL-109_125b 3522 chr3R 25422030 25422094 chr3R 25422145 25422243 14 130 6.0 0.5 3.2 3.3 213 chr3R 25422030 intron Fur1 - chr3R 25422136 intron Fur1 - chr3R 25422243 intron Fur1 - chr3R_14_25420001 chr3R_25420001 RAL-109_125b 3523 chr3R 25431397 25431447 chr3R 25431533 25431583 10 136 5.5 7.0 6.2 1.4 186 chr3R 25431397 intron Fur1 - chr3R 25431490 intron Fur1 - chr3R 25431583 intron Fur1 - chr3R_10_25430001 chr3R_25430001 RAL-109_125b 3524 chr3R 25465007 25465087 chr3R 25465134 25465214 9 127 2.5 6.5 4.5 1.6 207 chr3R 25465007 intron Fur1 - chr3R 25465110 intron Fur1 - chr3R 25465214 intron Fur1 - chr3R_9_25465001 chr3R_25465001 RAL-109_125b 3525 chr3R 25514403 25514451 chr3R 25514534 25514582 15 131 0.0 9.5 4.8 2.6 179 chr3R 25514403 intergenic not near genes chr3R 25514492 intergenic not near genes chr3R 25514582 intergenic not near genes chr3R_15_25510001 chr3R_25510001 RAL-109_125b 3526 chr3R 25520946 25520980 chr3R 25521095 25521098 12 146 11.5 2.5 7.0 1.5 152 chr3R 25520946 intron msi + chr3R 25521022 intron msi + chr3R 25521098 intron msi + chr3R_12_25520001 chr3R_25520001 RAL-109_125b 3527 chr3R 25528004 25528039 chr3R 25528142 25528181 16 149 20.0 7.0 13.5 1.1 177 chr3R 25528004 intron msi + chr3R 25528092 intron msi + chr3R 25528181 intron msi + chr3R_16_25525001 chr3R_25525001 RAL-109_125b 3528 chr3R 25543977 25544006 chr3R 25544113 25544142 9 135 8.0 23.5 15.8 0.5 165 chr3R 25543977 intron msi + chr3R 25544060 intron msi + chr3R 25544142 intron msi + chr3R_9_25540001 chr3R_25540001 RAL-109_125b 3529 chr3R 25612784 25612860 chr3R 25612938 25613004 25 151 2.0 12.0 7.0 3.1 220 chr3R 25612784 intron Npl4 - chr3R 25612894 intron Npl4 - chr3R 25613004 intron Npl4 - chr3R_25_25610001 chr3R_25610001 RAL-109_125b 3530 chr3R 25669019 25669091 chr3R 25669163 25669235 24 141 7.5 7.0 7.2 2.9 216 chr3R 25669019 intron Lgr3 + chr3R 25669127 intron Lgr3 + chr3R 25669235 exon Lgr3 + chr3R_24_25665001 chr3R_25665001 RAL-109_125b 3531 chr3R 25671201 25671266 chr3R 25671349 25671406 12 148 8.0 9.0 8.5 1.3 205 chr3R 25671201 intron Lgr3 + chr3R 25671304 intron Lgr3 + chr3R 25671406 intron Lgr3 + chr3R_12_25670001 chr3R_25670001 RAL-109_125b 3532 chr3R 25720765 25720833 chr3R 25720907 25720968 18 140 0.0 8.5 4.2 3.5 203 chr3R 25720765 intron LpR2 - chr3R 25720866 intron LpR2 - chr3R 25720968 intron LpR2 - chr3R_18_25720001 chr3R_25720001 RAL-109_125b 3533 chr3R 25725788 25725852 chr3R 25734998 25735062 roo 25 9210 6.0 11.0 8.5 2.6 9274 chr3R 25725788 intron LpR2 - chr3R 25730425 intron LpR2 - chr3R 25735062 intron LpR2 - chr3R_25_25730001 chr3R_25730001 RAL-109_125b 3534 chr3R 25741887 25741952 chr3R 25742013 25742073 12 119 10.0 8.5 9.2 1.2 186 chr3R 25741887 3` UTR LpR1 - chr3R 25741980 exon LpR1 - chr3R 25742073 intron LpR1 - chr3R_12_25740001 chr3R_25740001 RAL-109_125b 3535 chr3R 25755153 25755217 chr3R 25756063 25756127 30 909 6.0 8.5 7.2 3.7 974 chr3R 25755153 intron LpR1 - chr3R 25755640 intron LpR1 - chr3R 25756127 intron LpR1 - chr3R_30_25755001 chr3R_25755001 RAL-109_125b 3536 chr3R 25765835 25765843 chr3R 25765964 25765972 4 129 15.0 9.5 12.2 0.3 137 chr3R 25765835 intergenic not near genes chr3R 25765904 intergenic not near genes chr3R 25765972 intergenic not near genes chr3R_4_25765001 chr3R_25765001 RAL-109_125b 3537 chr3R 25765847 25765908 chr3R 25765956 25765960 22 111 7.5 9.5 8.5 2.3 113 chr3R 25765847 intergenic not near genes chr3R 25765904 intergenic not near genes chr3R 25765960 intergenic not near genes chr3R_22_25765001 chr3R_25765001 RAL-109_125b 3538 chr3R 25832656 25832669 chr3R 25841888 25841898 roo 6 9231 13.5 7.5 10.5 0.5 9242 chr3R 25832656 exon alpha4GT2 + chr3R 25837277 intron alpha4GT2 + chr3R 25841898 exon alpha4GT2 + chr3R_6_25835001 chr3R_25835001 RAL-109_125b 3539 chr3R 25832670 25832699 chr3R 25841881 25841920 roo 7 9227 7.5 6.5 7.0 0.9 9250 chr3R 25832670 exon alpha4GT2 + chr3R 25837295 intron alpha4GT2 + chr3R 25841920 exon alpha4GT2 + chr3R_7_25835001 chr3R_25835001 RAL-109_125b 3540 chr3R 25832700 25832714 chr3R 25841872 25841925 roo 4 9201 5.0 4.5 4.8 0.7 9225 chr3R 25832700 exon alpha4GT2 + chr3R 25837312 intron alpha4GT2 + chr3R 25841925 exon alpha4GT2 + chr3R_4_25835001 chr3R_25835001 RAL-109_125b 3541 chr3R 25843597 25843660 chr3R 25843777 25843840 26 180 6.0 7.5 6.8 3.3 243 chr3R 25843597 intergenic CR45653 + chr3R 25843718 intergenic CR45653 + chr3R 25843840 intergenic CR45653 + chr3R_26_25840001 chr3R_25840001 RAL-109_125b 3542 chr3R 25847643 25847720 chr3R 25847857 25847879 25 211 6.0 6.5 6.2 3.5 236 chr3R 25847643 intergenic CR45656 -,CR45657 + chr3R 25847761 intergenic CR45656 -,CR45657 + chr3R 25847879 intergenic CR45657 +,CR45656 - chr3R_25_25845001 chr3R_25845001 RAL-109_125b 3543 chr3R 25936370 25936441 chr3R 25936520 25936574 33 145 6.0 7.5 6.8 4.2 204 chr3R 25936370 intron CCAP-R - chr3R 25936472 intron CCAP-R - chr3R 25936574 intron CCAP-R - chr3R_33_25935001 chr3R_25935001 RAL-109_125b 3544 chr3R 26041142 26041180 chr3R 26041295 26041333 7 153 4.5 1.0 2.8 1.8 191 chr3R 26041142 intergenic E(spl)m8-HLH + chr3R 26041238 intergenic E(spl)m8-HLH +,gro + chr3R 26041333 intergenic E(spl)m8-HLH +,gro + chr3R_7_26040001 chr3R_26040001 RAL-109_125b 3545 chr3R 26093808 26093873 chr3R 26093936 26093989 25 125 12.0 12.5 12.2 1.9 181 chr3R 26093808 intron dys - chr3R 26093898 intron dys - chr3R 26093989 intron dys - chr3R_25_26090001 chr3R_26090001 RAL-109_125b 3546 chr3R 26121897 26121960 chr3R 26122044 26122107 8 145 7.0 10.0 8.5 0.8 210 chr3R 26121897 intron CG31324 + chr3R 26122002 intron CG31324 + chr3R 26122107 intron CG31324 + chr3R_8_26120001 chr3R_26120001 RAL-109_125b 3547 chr3R 26122415 26122478 chr3R 26122541 26122604 23 122 8.0 13.0 10.5 2.0 189 chr3R 26122415 intron CG31324 + chr3R 26122510 intron CG31324 + chr3R 26122604 intron CG31324 + chr3R_23_26120001 chr3R_26120001 RAL-109_125b 3548 chr3R 26126238 26126291 chr3R 26126378 26126446 16 152 9.5 11.5 10.5 1.4 208 chr3R 26126238 intron CG31324 + chr3R 26126342 intron CG31324 + chr3R 26126446 intron CG31324 + chr3R_16_26125001 chr3R_26125001 RAL-109_125b 3549 chr3R 26141901 26141940 chr3R 26142193 26142228 7 291 14.5 11.0 12.8 0.5 327 chr3R 26141901 intergenic not near genes chr3R 26142064 intergenic not near genes chr3R 26142228 intergenic not near genes chr3R_7_26140001 chr3R_26140001 RAL-109_125b 3550 chr3R 26141947 26141966 chr3R 26142183 26142257 13 284 7.5 8.0 7.8 1.5 310 chr3R 26141947 intergenic not near genes chr3R 26142102 intergenic not near genes chr3R 26142257 intergenic not near genes chr3R_13_26140001 chr3R_26140001 RAL-109_125b 3551 chr3R 26145834 26145861 chr3R 26145964 26145996 6 133 10.5 4.0 7.2 0.7 162 chr3R 26145834 intergenic not near genes chr3R 26145915 intergenic not near genes chr3R 26145996 intergenic not near genes chr3R_6_26145001 chr3R_26145001 RAL-109_125b 3552 chr3R 26145863 26145904 chr3R 26145963 26146014 13 123 1.0 4.0 2.5 3.7 151 chr3R 26145863 intergenic not near genes chr3R 26145938 intergenic not near genes chr3R 26146014 intergenic not near genes chr3R_13_26145001 chr3R_26145001 RAL-109_125b 3553 chr3R 26156842 26156848 chr3R 26156982 26156988 7 140 15.0 4.5 9.8 0.6 146 chr3R 26156842 intergenic not near genes chr3R 26156915 intergenic not near genes chr3R 26156988 intergenic not near genes chr3R_7_26155001 chr3R_26155001 RAL-109_125b 3554 chr3R 26156852 26156857 chr3R 26156991 26156997 4 140 13.0 5.5 9.2 0.4 145 chr3R 26156852 intergenic not near genes chr3R 26156924 intergenic not near genes chr3R 26156997 intergenic not near genes chr3R_4_26155001 chr3R_26155001 RAL-109_125b 3555 chr3R 26156861 26156921 chr3R 26156979 26157018 25 129 4.0 4.5 4.2 4.8 157 chr3R 26156861 intergenic not near genes chr3R 26156940 intergenic not near genes chr3R 26157018 intergenic not near genes chr3R_25_26155001 chr3R_26155001 RAL-109_125b 3556 chr3R 26159602 26159674 chr3R 26159770 26159842 29 166 6.5 4.0 5.2 4.7 240 chr3R 26159602 intergenic not near genes chr3R 26159722 intergenic not near genes chr3R 26159842 intergenic not near genes chr3R_29_26155001 chr3R_26155001 RAL-109_125b 3557 chr3R 26241203 26241275 chr3R 26241344 26241416 20 137 8.0 7.5 7.8 2.3 213 chr3R 26241203 intron CR42745 + chr3R 26241310 intron CR42745 + chr3R 26241416 intron CR42745 + chr3R_20_26240001 chr3R_26240001 RAL-109_125b 3558 chr3R 26292070 26292075 chr3R 26292200 26292205 4 130 19.5 11.0 15.2 0.2 135 chr3R 26292070 intergenic not near genes chr3R 26292138 intergenic not near genes chr3R 26292205 intergenic not near genes chr3R_4_26290001 chr3R_26290001 RAL-109_125b 3559 chr3R 26292078 26292135 chr3R 26292191 26292254 23 127 8.0 9.5 8.8 2.3 176 chr3R 26292078 intergenic not near genes chr3R 26292166 intergenic not near genes chr3R 26292254 intergenic not near genes chr3R_23_26290001 chr3R_26290001 RAL-109_125b 3560 chr3R 26365071 26365134 chr3R 26365202 26365268 16 133 5.0 8.0 6.5 2.1 197 chr3R 26365071 intergenic not near genes chr3R 26365170 intergenic not near genes chr3R 26365268 intergenic not near genes chr3R_16_26365001 chr3R_26365001 RAL-109_125b 3561 chr3R 26370280 26370351 chr3R 26370424 26370486 9 136 0.0 5.0 2.5 2.6 206 chr3R 26370280 intergenic not near genes chr3R 26370383 intergenic not near genes chr3R 26370486 intergenic not near genes chr3R_9_26370001 chr3R_26370001 RAL-109_125b 3562 chr3R 26376284 26376358 chr3R 26385492 26385582 roo 17 9212 5.0 0.5 2.8 4.5 9298 chr3R 26376284 intergenic not near genes chr3R 26380933 intergenic not near genes chr3R 26385582 intergenic not near genes chr3R_17_26380001 chr3R_26380001 RAL-109_125b 3563 chr3R 26405870 26405938 chr3R 26405996 26406064 22 125 0.0 0.0 0.0 22.0 194 chr3R 26405870 intergenic not near genes chr3R 26405967 intergenic not near genes chr3R 26406064 intergenic not near genes chr3R_22_26405001 chr3R_26405001 RAL-109_125b 3564 chr3R 26413250 26413286 chr3R 26413397 26413433 14 145 7.5 10.5 9.0 1.4 183 chr3R 26413250 intergenic not near genes chr3R 26413342 intergenic not near genes chr3R 26413433 intergenic not near genes chr3R_14_26410001 chr3R_26410001 RAL-109_125b 3565 chr3R 26507612 26507658 chr3R 26507744 26507789 11 127 8.5 7.0 7.8 1.2 177 chr3R 26507612 intron plum - chr3R 26507700 intron plum - chr3R 26507789 intron plum - chr3R_11_26505001 chr3R_26505001 RAL-109_125b 3566 chr3R 26510464 26510480 chr3R 26519575 26519585 roo 13 9110 16.0 11.0 13.5 0.9 9121 chr3R 26510464 intron plum - chr3R 26515024 intron plum - chr3R 26519585 intron,5` UTR plum -,CR45226 + chr3R_13_26515001 chr3R_26515001 RAL-109_125b 3567 chr3R 26510482 26510527 chr3R 26519567 26519631 roo 17 9109 9.0 9.5 9.2 1.7 9149 chr3R 26510482 intron plum - chr3R 26515056 intron plum - chr3R 26519631 intron,5` UTR plum -,CR45226 + chr3R_17_26515001 chr3R_26515001 RAL-109_125b 3568 chr3R 26558283 26558351 chr3R 26565645 26565687 Stalker4 19 7359 10.5 11.0 10.8 1.6 7404 chr3R 26558283 intron scrib + chr3R 26561985 intron scrib + chr3R 26565687 intron scrib + chr3R_19_26560001 chr3R_26560001 RAL-109_125b 3569 chr3R 26642699 26642748 chr3R 26643143 26643192 jockey 16 442 11.5 8.5 10.0 1.5 493 chr3R 26642699 intergenic not near genes chr3R 26642946 intergenic not near genes chr3R 26643192 intergenic not near genes chr3R_16_26640001 chr3R_26640001 RAL-109_125b 3570 chr3R 26688813 26688862 chr3R 26688941 26688990 9 127 9.0 8.5 8.8 0.9 177 chr3R 26688813 intergenic not near genes chr3R 26688902 intergenic not near genes chr3R 26688990 intergenic not near genes chr3R_9_26685001 chr3R_26685001 RAL-109_125b 3571 chr3R 26710778 26710851 chr3R 26710912 26710985 31 134 6.5 6.5 6.5 4.1 207 chr3R 26710778 intron amon - chr3R 26710882 intron amon - chr3R 26710985 intron amon - chr3R_31_26710001 chr3R_26710001 RAL-109_125b 3572 chr3R 26740248 26740317 chr3R 26740366 26740443 25 121 9.5 9.0 9.2 2.5 195 chr3R 26740248 intergenic not near genes chr3R 26740346 intergenic not near genes chr3R 26740443 intergenic not near genes chr3R_25_26740001 chr3R_26740001 RAL-109_125b 3573 chr3R 26753326 26753377 chr3R 26753443 26753491 20 120 6.5 7.5 7.0 2.5 165 chr3R 26753326 intergenic not near genes chr3R 26753408 intergenic not near genes chr3R 26753491 intergenic not near genes chr3R_20_26750001 chr3R_26750001 RAL-109_125b 3574 chr3R 26770192 26770216 chr3R 26770319 26770341 14 127 18.5 9.5 14.0 0.9 149 chr3R 26770192 intergenic CR45563 + chr3R 26770266 intergenic CR45563 + chr3R 26770341 intergenic not near genes chr3R_14_26770001 chr3R_26770001 RAL-109_125b 3575 chr3R 26770220 26770262 chr3R 26770317 26770389 11 124 10.0 9.5 9.8 1.0 169 chr3R 26770220 intergenic CR45563 + chr3R 26770304 intergenic CR45563 + chr3R 26770389 intergenic not near genes chr3R_11_26770001 chr3R_26770001 RAL-109_125b 3576 chr3R 26778362 26778433 chr3R 26778513 26778574 25 148 9.5 10.0 9.8 2.3 212 chr3R 26778362 intergenic not near genes chr3R 26778468 intergenic not near genes chr3R 26778574 intergenic not near genes chr3R_25_26775001 chr3R_26775001 RAL-109_125b 3577 chr3R 26810510 26810581 chr3R 26811045 26811096 roo 13 531 10.0 9.5 9.8 1.2 586 chr3R 26810510 intron Tl + chr3R 26810803 intron Tl + chr3R 26811096 intron Tl + chr3R_13_26810001 chr3R_26810001 RAL-109_125b 3578 chr3R 26845530 26845596 chr3R 26845660 26845726 18 127 8.0 9.0 8.5 1.9 196 chr3R 26845530 intron Lerp - chr3R 26845628 intron Lerp - chr3R 26845726 intron Lerp - chr3R_18_26845001 chr3R_26845001 RAL-109_125b 3579 chr3R 26901458 26901493 chr3R 26901593 26901628 4 135 18.0 1.0 9.5 0.4 170 chr3R 26901458 intron T48 + chr3R 26901543 intron T48 + chr3R 26901628 intron T48 + chr3R_4_26900001 chr3R_26900001 RAL-109_125b 3580 chr3R 27007367 27007425 chr3R 27016552 27016610 roo 15 9183 8.0 5.0 6.5 2.0 9243 chr3R 27007367 intron RYa-R + chr3R 27011988 intron RYa-R + chr3R 27016610 intron RYa-R + chr3R_15_27010001 chr3R_27010001 RAL-109_125b 3581 chr3R 27019470 27019534 chr3R 27019616 27019680 29 141 8.5 9.0 8.8 3.0 210 chr3R 27019470 intron,exon RYa-R +,CG17191 - chr3R 27019575 intron,exon RYa-R +,CG17191 - chr3R 27019680 intron,intron RYa-R +,CG17191 - chr3R_29_27015001 chr3R_27015001 RAL-109_125b 3582 chr3R 27027635 27027703 chr3R 27027769 27027830 20 131 9.5 0.5 5.0 3.3 195 chr3R 27027635 intron RYa-R + chr3R 27027732 intron RYa-R + chr3R 27027830 intron RYa-R + chr3R_20_27025001 chr3R_27025001 RAL-109_125b 3583 chr3R 27028676 27028750 chr3R 27028805 27028879 21 128 8.5 6.5 7.5 2.5 203 chr3R 27028676 exon RYa-R + chr3R 27028778 intron RYa-R + chr3R 27028879 intron RYa-R + chr3R_21_27025001 chr3R_27025001 RAL-109_125b 3584 chr3R 27030264 27030336 chr3R 27030603 27030674 26 336 6.5 6.0 6.2 3.6 410 chr3R 27030264 intron RYa-R + chr3R 27030469 intron RYa-R + chr3R 27030674 exon RYa-R + chr3R_26_27030001 chr3R_27030001 RAL-109_125b 3585 chr3R 27107121 27107187 chr3R 27107395 27107461 29 269 8.0 12.0 10.0 2.6 340 chr3R 27107121 intergenic not near genes chr3R 27107291 intergenic not near genes chr3R 27107461 intergenic not near genes chr3R_29_27105001 chr3R_27105001 RAL-109_125b 3586 chr3R 27140470 27140492 chr3R 27148130 27148152 412 12 7659 23.5 10.0 16.8 0.7 7682 chr3R 27140470 intron CG6051 - chr3R 27144311 intron CG6051 - chr3R 27148152 intron CG6051 - chr3R_12_27140001 chr3R_27140001 RAL-109_125b 3587 chr3R 27140495 27140534 chr3R 27148129 27148194 412 13 7654 13.0 10.0 11.5 1.0 7699 chr3R 27140495 intron CG6051 - chr3R 27144344 intron CG6051 - chr3R 27148194 intron CG6051 - chr3R_13_27140001 chr3R_27140001 RAL-109_125b 3588 chr3R 27200113 27200126 chr3R 27200250 27200251 8 136 14.5 8.5 11.5 0.6 138 chr3R 27200113 intergenic not near genes chr3R 27200182 intergenic not near genes chr3R 27200251 intergenic not near genes chr3R_8_27200001 chr3R_27200001 RAL-109_125b 3589 chr3R 27200127 27200149 chr3R 27200249 27200286 6 128 10.5 8.0 9.2 0.6 159 chr3R 27200127 intergenic not near genes chr3R 27200206 intergenic not near genes chr3R 27200286 intergenic not near genes chr3R_6_27200001 chr3R_27200001 RAL-109_125b 3590 chr3R 27200151 27200190 chr3R 27200243 27200261 14 122 6.5 7.0 6.8 1.8 110 chr3R 27200151 intergenic not near genes chr3R 27200206 intergenic not near genes chr3R 27200261 intergenic not near genes chr3R_14_27200001 chr3R_27200001 RAL-109_125b 3591 chr3R 27299678 27299727 chr3R 27299810 27299859 18 127 6.0 9.5 7.8 2.0 181 chr3R 27299678 intron CG3339 - chr3R 27299768 intron CG3339 - chr3R 27299859 intron CG3339 - chr3R_18_27295001 chr3R_27295001 RAL-109_125b 3592 chr3R 27300813 27300877 chr3R 27300955 27301019 32 137 4.0 7.0 5.5 4.9 206 chr3R 27300813 intron CG3339 - chr3R 27300916 intron CG3339 - chr3R 27301019 intron CG3339 - chr3R_32_27300001 chr3R_27300001 RAL-109_125b 3593 chr3R 27303503 27303576 chr3R 27303641 27303704 14 131 4.0 1.0 2.5 4.0 201 chr3R 27303503 intron CG3339 - chr3R 27303604 intron CG3339 - chr3R 27303704 intron CG3339 - chr3R_14_27300001 chr3R_27300001 RAL-109_125b 3594 chr3R 27327378 27327455 chr3R 27327506 27327584 22 119 6.5 6.5 6.5 2.9 206 chr3R 27327378 intergenic not near genes chr3R 27327481 intergenic not near genes chr3R 27327584 intergenic not near genes chr3R_22_27325001 chr3R_27325001 RAL-109_125b 3595 chr3R 27329430 27329434 chr3R 27329557 27329561 4 127 14.0 5.5 9.8 0.4 131 chr3R 27329430 intergenic CG3330 - chr3R 27329496 intergenic CG3330 - chr3R 27329561 intergenic CG3330 - chr3R_4_27325001 chr3R_27325001 RAL-109_125b 3596 chr3R 27329435 27329499 chr3R 27329556 27329626 14 124 8.0 5.0 6.5 1.9 191 chr3R 27329435 intergenic CG3330 - chr3R 27329530 intergenic CG3330 - chr3R 27329626 intergenic CG3330 - chr3R_14_27325001 chr3R_27325001 RAL-109_125b 3597 chr3R 27335898 27335954 chr3R 27336029 27336066 10 126 9.0 0.0 4.5 1.8 168 chr3R 27335898 intergenic not near genes chr3R 27335982 intergenic not near genes chr3R 27336066 intergenic not near genes chr3R_10_27335001 chr3R_27335001 RAL-109_125b 3598 chr3R 27342751 27342775 chr3R 27351382 27351406 Tirant 13 8631 16.0 11.5 13.8 0.9 8655 chr3R 27342751 intron CG42534 + chr3R 27347078 intron CG42534 + chr3R 27351406 intron CG42534 + chr3R_13_27345001 chr3R_27345001 RAL-109_125b 3599 chr3R 27342781 27342819 chr3R 27351377 27351450 Tirant 14 8628 8.0 11.5 9.8 1.3 8669 chr3R 27342781 intron CG42534 + chr3R 27347116 intron CG42534 + chr3R 27351450 intron CG42534 + chr3R_14_27345001 chr3R_27345001 RAL-109_125b 3600 chr3R 27426122 27426170 chr3R 27426256 27426297 8 127 0.5 11.5 6.0 1.1 175 chr3R 27426122 intron side - chr3R 27426210 intron side - chr3R 27426297 intron side - chr3R_8_27425001 chr3R_27425001 RAL-109_125b 3601 chr3R 27443352 27443421 chr3R 27443479 27443542 15 125 6.0 4.5 5.2 2.4 190 chr3R 27443352 intergenic not near genes chr3R 27443447 intergenic not near genes chr3R 27443542 intergenic not near genes chr3R_15_27440001 chr3R_27440001 RAL-109_125b 3602 chr3R 27473722 27473793 chr3R 27474027 27474098 33 301 6.5 11.5 9.0 3.3 376 chr3R 27473722 intergenic not near genes chr3R 27473910 intergenic not near genes chr3R 27474098 intergenic not near genes chr3R_33_27470001 chr3R_27470001 RAL-109_125b 3603 chr3R 27479133 27479177 chr3R 27479270 27479327 16 152 10.5 6.5 8.5 1.7 194 chr3R 27479133 exon Cyp6a18 + chr3R 27479230 exon Cyp6a18 + chr3R 27479327 exon Cyp6a18 + chr3R_16_27475001 chr3R_27475001 RAL-109_125b 3604 chr3R 27499456 27499520 chr3R 27499582 27499659 20 134 4.5 6.5 5.5 3.1 203 chr3R 27499456 intergenic not near genes chr3R 27499558 intergenic not near genes chr3R 27499659 intergenic not near genes chr3R_20_27495001 chr3R_27495001 RAL-109_125b 3605 chr3R 27521116 27521184 chr3R 27530374 27530447 roo 6 9262 3.5 0.5 2.0 2.0 9331 chr3R 27521116 intron CG12885 + chr3R 27525782 intron CG12885 + chr3R 27530447 intron CG12885 + chr3R_6_27525001 chr3R_27525001 RAL-109_125b 3606 chr3R 27595007 27595024 chr3R 27595140 27595157 8 133 2.0 6.5 4.2 1.5 150 chr3R 27595007 intron CG5639 - chr3R 27595082 intron CG5639 - chr3R 27595157 intron CG5639 - chr3R_8_27595001 chr3R_27595001 RAL-109_125b 3607 chr3R 27595031 27595080 chr3R 27595138 27595203 22 127 2.0 6.5 4.2 4.2 172 chr3R 27595031 intron CG5639 - chr3R 27595117 intron CG5639 - chr3R 27595203 intron CG5639 - chr3R_22_27595001 chr3R_27595001 RAL-109_125b 3608 chr3R 27706742 27706794 chr3R 27706858 27706910 12 123 10.0 9.0 9.5 1.1 168 chr3R 27706742 5` UTR CG12428 - chr3R 27706826 intergenic CG12428 -,CG12877 + chr3R 27706910 intergenic CG12428 -,CG12877 + chr3R_12_27705001 chr3R_27705001 RAL-109_125b 3609 chr3R 27725529 27725582 chr3R 27731021 27731074 I-element 22 5490 7.5 8.0 7.8 2.5 5545 chr3R 27725529 intergenic not near genes chr3R 27728302 intergenic not near genes chr3R 27731074 intergenic not near genes chr3R_22_27725001 chr3R_27725001 RAL-109_125b 3610 chr3R 27731158 27731179 chr3R 27731289 27731302 6 130 16.5 7.0 11.8 0.5 144 chr3R 27731158 intergenic not near genes chr3R 27731230 intergenic not near genes chr3R 27731302 intergenic not near genes chr3R_6_27730001 chr3R_27730001 RAL-109_125b 3611 chr3R 27731185 27731225 chr3R 27731288 27731334 18 120 6.5 7.0 6.8 2.3 149 chr3R 27731185 intergenic not near genes chr3R 27731260 intergenic not near genes chr3R 27731334 intergenic not near genes chr3R_18_27730001 chr3R_27730001 RAL-109_125b 3612 chr3R 27735049 27735107 chr3R 27735326 27735363 17 265 4.5 5.5 5.0 2.8 314 chr3R 27735049 intergenic not near genes chr3R 27735206 intergenic not near genes chr3R 27735363 intergenic not near genes chr3R_17_27735001 chr3R_27735001 RAL-109_125b 3613 chr3R 27747944 27748012 chr3R 27748072 27748135 26 127 4.5 10.5 7.5 3.1 191 chr3R 27747944 3` UTR Ets98B + chr3R 27748040 3` UTR Ets98B + chr3R 27748135 3` UTR Ets98B + chr3R_26_27745001 chr3R_27745001 RAL-109_125b 3614 chr3R 27779232 27779255 chr3R 27779353 27779385 9 128 11.5 7.0 9.2 0.9 153 chr3R 27779232 exon CG34353 - chr3R 27779308 intron CG34353 - chr3R 27779385 intron CG34353 - chr3R_9_27775001 chr3R_27775001 RAL-109_125b 3615 chr3R 27779256 27779286 chr3R 27779349 27779401 22 121 7.5 6.5 7.0 2.8 145 chr3R 27779256 exon CG34353 - chr3R 27779328 intron CG34353 - chr3R 27779401 intron CG34353 - chr3R_22_27775001 chr3R_27775001 RAL-109_125b 3616 chr3R 27791634 27791643 chr3R 27794792 27794838 Rt1c 4 3178 15.0 11.0 13.0 0.3 3204 chr3R 27791634 intron CG34353 - chr3R 27793236 intron CG34353 - chr3R 27794838 intron CG34353 - chr3R_4_27790001 chr3R_27790001 RAL-109_125b 3617 chr3R 27799890 27799962 chr3R 27800022 27800094 31 131 4.5 7.5 6.0 4.4 204 chr3R 27799890 intron CG34353 - chr3R 27799992 intron CG34353 - chr3R 27800094 intron CG34353 - chr3R_31_27795001 chr3R_27795001 RAL-109_125b 3618 chr3R 27838110 27838183 chr3R 27838245 27838313 34 131 9.0 5.0 7.0 4.2 203 chr3R 27838110 intron CG34353 - chr3R 27838212 intron CG34353 - chr3R 27838313 intron CG34353 - chr3R_34_27835001 chr3R_27835001 RAL-109_125b 3619 chr3R 27856716 27856787 chr3R 27858249 27858320 hopper2 21 1532 4.0 10.0 7.0 2.6 1604 chr3R 27856716 intron CG34353 - chr3R 27857518 intron CG34353 - chr3R 27858320 intron CG34353 - chr3R_21_27855001 chr3R_27855001 RAL-109_125b 3620 chr3R 27862932 27862974 chr3R 27868288 27868325 Transpac 8 5354 0.0 12.0 6.0 1.1 5393 chr3R 27862932 intron CG34353 - chr3R 27865628 intron CG34353 - chr3R 27868325 intron CG34353 - chr3R_8_27865001 chr3R_27865001 RAL-109_125b 3621 chr3R 27875671 27875730 chr3R 27882765 27882789 297 16 7097 7.5 11.0 9.2 1.6 7118 chr3R 27875671 intron CG34353 - chr3R 27879230 intron CG34353 - chr3R 27882789 intron CG34353 - chr3R_16_27875001 chr3R_27875001 RAL-109_125b 3622 chr3R 27996714 27996766 chr3R 27996851 27996920 19 151 5.5 5.5 5.5 2.9 206 chr3R 27996714 intergenic not near genes chr3R 27996817 intergenic not near genes chr3R 27996920 intergenic not near genes chr3R_19_27995001 chr3R_27995001 RAL-109_125b 3623 chr3R 28016602 28016673 chr3R 28016742 28016814 25 139 7.5 1.0 4.2 4.8 212 chr3R 28016602 intergenic not near genes chr3R 28016708 intergenic not near genes chr3R 28016814 intergenic not near genes chr3R_25_28015001 chr3R_28015001 RAL-109_125b 3624 chr3R 28040942 28040967 chr3R 28041073 28041098 13 129 0.0 9.5 4.8 2.2 156 chr3R 28040942 intron CG34362 + chr3R 28041020 intron CG34362 + chr3R 28041098 intron CG34362 + chr3R_13_28040001 chr3R_28040001 RAL-109_125b 3625 chr3R 28047991 28048046 chr3R 28048124 28048179 14 132 8.0 6.5 7.2 1.7 188 chr3R 28047991 intron CG34362 + chr3R 28048085 intron CG34362 + chr3R 28048179 intron CG34362 + chr3R_14_28045001 chr3R_28045001 RAL-109_125b 3626 chr3R 28068478 28068501 chr3R 28073970 28073993 I-element 6 5489 0.0 10.5 5.2 1.0 5515 chr3R 28068478 intron CG34362 + chr3R 28071236 intron CG34362 + chr3R 28073993 intron CG34362 + chr3R_6_28070001 chr3R_28070001 RAL-109_125b 3627 chr3R 28068504 28068510 chr3R 28073962 28074002 I-element 6 5481 0.0 10.0 5.0 1.0 5498 chr3R 28068504 intron CG34362 + chr3R 28071253 intron CG34362 + chr3R 28074002 intron CG34362 + chr3R_6_28070001 chr3R_28070001 RAL-109_125b 3628 chr3R 28121243 28121295 chr3R 28121384 28121425 11 139 6.5 5.0 5.8 1.6 182 chr3R 28121243 intergenic not near genes chr3R 28121334 intergenic not near genes chr3R 28121425 intergenic not near genes chr3R_11_28120001 chr3R_28120001 RAL-109_125b 3629 chr3R 28126681 28126753 chr3R 28126817 28126884 16 124 9.5 4.5 7.0 2.0 203 chr3R 28126681 intergenic not near genes chr3R 28126782 intergenic not near genes chr3R 28126884 intergenic not near genes chr3R_16_28125001 chr3R_28125001 RAL-109_125b 3630 chr3R 28131385 28131455 chr3R 28131618 28131687 22 230 8.0 8.0 8.0 2.4 302 chr3R 28131385 intergenic not near genes chr3R 28131536 intergenic not near genes chr3R 28131687 intergenic not near genes chr3R_22_28130001 chr3R_28130001 RAL-109_125b 3631 chr3R 28172944 28172994 chr3R 28173151 28173202 12 205 3.0 10.5 6.8 1.5 258 chr3R 28172944 intron CG34354 + chr3R 28173073 intron CG34354 + chr3R 28173202 intron CG34354 + chr3R_12_28170001 chr3R_28170001 RAL-109_125b 3632 chr3R 28173624 28173703 chr3R 28181104 28181143 mdg1 18 7473 2.5 6.5 4.5 3.3 7519 chr3R 28173624 intron CG34354 + chr3R 28177384 intron CG34354 + chr3R 28181143 intron CG34354 + chr3R_18_28175001 chr3R_28175001 RAL-109_125b 3633 chr3R 28215773 28215848 chr3R 28215897 28215938 22 109 10.5 8.5 9.5 2.1 165 chr3R 28215773 intron CG34354 + chr3R 28215856 intron CG34354 + chr3R 28215938 intron CG34354 + chr3R_22_28215001 chr3R_28215001 RAL-109_125b 3634 chr3R 28253297 28253324 chr3R 28255857 28255868 jockey 7 2553 10.5 12.0 11.2 0.6 2571 chr3R 28253297 intergenic not near genes chr3R 28254582 intergenic not near genes chr3R 28255868 intergenic not near genes chr3R_7_28250001 chr3R_28250001 RAL-109_125b 3635 chr3R 28253327 28253361 chr3R 28255850 28255911 jockey 18 2551 7.0 10.0 8.5 1.9 2584 chr3R 28253327 intergenic not near genes chr3R 28254619 intergenic not near genes chr3R 28255911 intergenic not near genes chr3R_18_28250001 chr3R_28250001 RAL-109_125b 3636 chr3R 28302070 28302132 chr3R 28302559 28302572 jockey 33 485 7.0 11.0 9.0 3.3 502 chr3R 28302070 intergenic not near genes chr3R 28302321 intergenic not near genes chr3R 28302572 intergenic not near genes chr3R_33_28300001 chr3R_28300001 RAL-109_125b 3637 chr3R 28308028 28308077 chr3R 28308155 28308179 15 118 8.5 10.0 9.2 1.5 151 chr3R 28308028 intergenic not near genes chr3R 28308104 intergenic not near genes chr3R 28308179 intergenic not near genes chr3R_15_28305001 chr3R_28305001 RAL-109_125b 3638 chr3R 28327265 28327334 chr3R 28327463 28327532 26 197 8.5 9.5 9.0 2.6 267 chr3R 28327265 intron larp - chr3R 28327398 intron larp - chr3R 28327532 intron larp - chr3R_26_28325001 chr3R_28325001 RAL-109_125b 3639 chr3R 28331490 28331530 chr3R 28331619 28331649 12 128 4.5 13.0 8.8 1.2 159 chr3R 28331490 intron larp - chr3R 28331570 intron larp - chr3R 28331649 intron larp - chr3R_12_28330001 chr3R_28330001 RAL-109_125b 3640 chr3R 28351923 28351994 chr3R 28352049 28352116 18 121 6.5 12.5 9.5 1.7 193 chr3R 28351923 intergenic Or98b + chr3R 28352020 intergenic Or98b + chr3R 28352116 intergenic Or98b + chr3R_18_28350001 chr3R_28350001 RAL-109_125b 3641 chr3R 28390090 28390137 chr3R 28390196 28390245 33 112 3.5 8.5 6.0 4.7 155 chr3R 28390090 intergenic not near genes chr3R 28390168 intergenic not near genes chr3R 28390245 intergenic not near genes chr3R_33_28390001 chr3R_28390001 RAL-109_125b 3642 chr3R 28393653 28393731 chr3R 28393803 28393816 31 147 9.0 8.5 8.8 3.2 163 chr3R 28393653 intergenic not near genes chr3R 28393734 intergenic not near genes chr3R 28393816 intergenic not near genes chr3R_31_28390001 chr3R_28390001 RAL-109_125b 3643 chr3R 28407671 28407697 chr3R 28407807 28407833 8 135 14.0 10.5 12.2 0.6 162 chr3R 28407671 intergenic not near genes chr3R 28407752 intergenic not near genes chr3R 28407833 intergenic not near genes chr3R_8_28405001 chr3R_28405001 RAL-109_125b 3644 chr3R 28407699 28407707 chr3R 28407802 28407803 4 118 12.0 10.5 11.2 0.3 104 chr3R 28407699 intergenic not near genes chr3R 28407751 intergenic not near genes chr3R 28407803 intergenic not near genes chr3R_4_28405001 chr3R_28405001 RAL-109_125b 3645 chr3R 28407708 28407742 chr3R 28407796 28407806 9 113 9.5 10.0 9.8 0.8 98 chr3R 28407708 intergenic not near genes chr3R 28407757 intergenic not near genes chr3R 28407806 intergenic not near genes chr3R_9_28405001 chr3R_28405001 RAL-109_125b 3646 chr3R 28478443 28478515 chr3R 28478569 28478636 23 123 8.0 9.5 8.8 2.3 193 chr3R 28478443 intergenic not near genes chr3R 28478540 intergenic not near genes chr3R 28478636 intergenic not near genes chr3R_23_28475001 chr3R_28475001 RAL-109_125b 3647 chr3R 28478943 28479167 chr3R 28479089 28479300 44 138 0.0 0.5 0.2 36.7 357 chr3R 28478943 intergenic not near genes chr3R 28479122 intergenic not near genes chr3R 28479300 intergenic not near genes chr3R_44_28475001 chr3R_28475001 RAL-109_125b 3648 chr3R 28480285 28480329 chr3R 28480416 28480460 20 128 9.0 7.5 8.2 2.2 175 chr3R 28480285 intergenic not near genes chr3R 28480372 intergenic not near genes chr3R 28480460 intergenic not near genes chr3R_20_28480001 chr3R_28480001 RAL-109_125b 3649 chr3R 28531714 28531721 chr3R 28531852 28531859 4 138 24.5 10.5 17.5 0.2 145 chr3R 28531714 intron Ppn - chr3R 28531786 intron Ppn - chr3R 28531859 intron Ppn - chr3R_4_28530001 chr3R_28530001 RAL-109_125b 3650 chr3R 28531723 28531738 chr3R 28531848 28531866 7 127 19.0 10.0 14.5 0.5 143 chr3R 28531723 intron Ppn - chr3R 28531794 intron Ppn - chr3R 28531866 intron Ppn - chr3R_7_28530001 chr3R_28530001 RAL-109_125b 3651 chr3R 28667848 28667878 chr3R 28668015 28668047 8 166 16.5 9.0 12.8 0.6 199 chr3R 28667848 intergenic not near genes chr3R 28667948 intergenic not near genes chr3R 28668047 intergenic not near genes chr3R_8_28665001 chr3R_28665001 RAL-109_125b 3652 chr3R 28667881 28667913 chr3R 28668009 28668033 8 147 4.0 8.5 6.2 1.1 152 chr3R 28667881 intergenic not near genes chr3R 28667957 intergenic not near genes chr3R 28668033 intergenic not near genes chr3R_8_28665001 chr3R_28665001 RAL-109_125b 3653 chr3R 28736154 28736229 chr3R 28736289 28736357 17 128 5.0 5.0 5.0 2.8 203 chr3R 28736154 intergenic not near genes chr3R 28736256 intergenic not near genes chr3R 28736357 intergenic not near genes chr3R_17_28735001 chr3R_28735001 RAL-109_125b 3654 chr3R 28758248 28758254 chr3R 28763915 28763921 roo 5 5667 18.5 0.0 9.2 0.5 5673 chr3R 28758248 intergenic aqrs - chr3R 28761084 intergenic not near genes chr3R 28763921 intergenic not near genes chr3R_5_28760001 chr3R_28760001 RAL-109_125b 3655 chr3R 28758272 28758318 chr3R 28771329 28771365 Stalker4 9 13056 4.5 7.5 6.0 1.3 13093 chr3R 28758272 intergenic aqrs - chr3R 28764818 intergenic not near genes chr3R 28771365 intergenic not near genes chr3R_9_28760001 chr3R_28760001 RAL-109_125b 3656 chr3R 28792823 28792898 chr3R 28797968 28798043 jockey 20 5128 5.5 10.5 8.0 2.2 5220 chr3R 28792823 intergenic not near genes chr3R 28795433 intergenic not near genes chr3R 28798043 intergenic not near genes chr3R_20_28795001 chr3R_28795001 RAL-109_125b 3657 chr3R 28811535 28811589 chr3R 28811726 28811785 23 195 3.5 9.5 6.5 3.1 250 chr3R 28811535 intergenic wdn - chr3R 28811660 intergenic wdn -,CG1646 + chr3R 28811785 intergenic CG1646 +,wdn - chr3R_23_28810001 chr3R_28810001 RAL-109_125b 3658 chr3R 28830852 28830912 chr3R 28830980 28831040 23 124 10.0 13.0 11.5 1.8 188 chr3R 28830852 intron WASp - chr3R 28830946 intron WASp - chr3R 28831040 intron WASp - chr3R_23_28830001 chr3R_28830001 RAL-109_125b 3659 chr3R 21907534 21907536 chr3R 28831801 28831801 84 6924266 34.5 21.0 27.8 2.9 6924267 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831801 intron WASp - chr3R_84_25365001 chr3R_25365001 RAL-109_125b 3660 chr3R 21907534 21907536 chr3R 28831802 28831802 34 6924267 34.5 21.0 27.8 1.2 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_34_25365001 chr3R_25365001 RAL-109_125b 3661 chr3R 28862100 28862153 chr3R 28862227 28862260 21 126 9.5 3.5 6.5 2.8 160 chr3R 28862100 intron spg + chr3R 28862180 intron spg + chr3R 28862260 intron spg + chr3R_21_28860001 chr3R_28860001 RAL-109_125b 3662 chr3R 28918506 28918576 chr3R 28918632 28918683 4 121 9.5 11.0 10.2 0.4 177 chr3R 28918506 intron Doa + chr3R 28918594 intron Doa + chr3R 28918683 intron Doa + chr3R_4_28915001 chr3R_28915001 RAL-109_125b 3663 chr3R 28947953 28947996 chr3R 28948090 28948158 19 157 3.5 7.5 5.5 2.9 205 chr3R 28947953 intron CG14521 - chr3R 28948056 intron CG14521 - chr3R 28948158 intron CG14521 - chr3R_19_28945001 chr3R_28945001 RAL-109_125b 3664 chr3R 28960474 28960537 chr3R 28960609 28960672 16 134 7.0 5.0 6.0 2.3 198 chr3R 28960474 intron CG14521 - chr3R 28960573 intron CG14521 - chr3R 28960672 intron CG14521 - chr3R_16_28960001 chr3R_28960001 RAL-109_125b 3665 chr3R 28971126 28971186 chr3R 28971257 28971300 14 130 7.5 6.5 7.0 1.8 174 chr3R 28971126 5` UTR CR45669 + chr3R 28971213 5` UTR CR45669 + chr3R 28971300 5` UTR CR45669 + chr3R_14_28970001 chr3R_28970001 RAL-109_125b 3666 chr3R 28989861 28989930 chr3R 28990081 28990155 31 222 7.0 6.5 6.8 4.0 294 chr3R 28989861 intergenic not near genes chr3R 28990008 intergenic not near genes chr3R 28990155 intergenic not near genes chr3R_31_28990001 chr3R_28990001 RAL-109_125b 3667 chr3R 29009912 29009980 chr3R 29010068 29010136 26 152 11.0 7.0 9.0 2.6 224 chr3R 29009912 intron wat - chr3R 29010024 intron wat - chr3R 29010136 intron wat - chr3R_26_29010001 chr3R_29010001 RAL-109_125b 3668 chr3R 29053689 29053754 chr3R 29054249 29054346 26 573 6.5 0.0 3.2 6.2 657 chr3R 29053689 exon CG11842 + chr3R 29054018 intergenic CG11842 +,CG11843 + chr3R 29054346 5` UTR CG11843 + chr3R_26_29050001 chr3R_29050001 RAL-109_125b 3669 chr3R 29054258 29054268 chr3R 29054393 29054403 4 135 0.0 21.0 10.5 0.3 145 chr3R 29054258 intergenic CG11843 +,CG11842 + chr3R 29054330 intergenic CG11843 +,CG11842 + chr3R 29054403 5` UTR CG11843 + chr3R_4_29050001 chr3R_29050001 RAL-109_125b 3670 chr3R 29077178 29077257 chr3R 29077312 29077364 25 130 4.5 7.0 5.8 3.7 186 chr3R 29077178 intron CG11873 + chr3R 29077271 intron CG11873 + chr3R 29077364 intron CG11873 + chr3R_25_29075001 chr3R_29075001 RAL-109_125b 3671 chr3R 29079343 29079400 chr3R 29080765 29080822 NOF 11 1421 10.0 10.0 10.0 1.0 1479 chr3R 29079343 intron CG11873 + chr3R 29080082 intron CG11873 + chr3R 29080822 intron CG11873 + chr3R_11_29080001 chr3R_29080001 RAL-109_125b 3672 chr3R 29213018 29213089 chr3R 29213151 29213222 19 129 10.5 9.0 9.8 1.8 204 chr3R 29213018 intergenic not near genes chr3R 29213120 intergenic not near genes chr3R 29213222 intergenic not near genes chr3R_19_29210001 chr3R_29210001 RAL-109_125b 3673 chr3R 29240271 29240320 chr3R 29240405 29240451 10 131 13.0 1.5 7.2 1.2 180 chr3R 29240271 intron CG31427 - chr3R 29240361 5` UTR CG31427 - chr3R 29240451 intergenic CG31427 -,CG31445 - chr3R_10_29240001 chr3R_29240001 RAL-109_125b 3674 chr3R 29249869 29249902 chr3R 29250008 29250041 4 139 0.0 3.5 1.8 1.4 172 chr3R 29249869 intron SP1029 - chr3R 29249955 intron SP1029 - chr3R 29250041 intron SP1029 - chr3R_4_29245001 chr3R_29245001 RAL-109_125b 3675 chr3R 29264150 29264209 chr3R 29264302 29264361 12 149 0.0 7.0 3.5 2.7 211 chr3R 29264150 intergenic not near genes chr3R 29264256 intergenic not near genes chr3R 29264361 intergenic not near genes chr3R_12_29260001 chr3R_29260001 RAL-109_125b 3676 chr3R 29284741 29284807 chr3R 29285184 29285252 30 435 5.5 7.0 6.2 4.2 511 chr3R 29284741 intergenic not near genes chr3R 29284996 intergenic not near genes chr3R 29285252 intergenic not near genes chr3R_30_29280001 chr3R_29280001 RAL-109_125b 3677 chr3R 29319779 29319851 chr3R 29320148 29320215 jockey 14 368 4.5 10.0 7.2 1.7 436 chr3R 29319779 intergenic Cnx99A - chr3R 29319997 intergenic Cnx99A - chr3R 29320215 intergenic not near genes chr3R_14_29315001 chr3R_29315001 RAL-109_125b 3678 chr3R 29330885 29330894 chr3R 29331011 29331019 4 126 11.5 0.0 5.8 0.6 134 chr3R 29330885 intergenic not near genes chr3R 29330952 intergenic not near genes chr3R 29331019 intergenic not near genes chr3R_4_29330001 chr3R_29330001 RAL-109_125b 3679 chr3R 29355998 29356080 chr3R 29356128 29356211 15 131 2.0 6.5 4.2 2.9 213 chr3R 29355998 intergenic CR45547 - chr3R 29356104 intergenic CR45547 - chr3R 29356211 3` UTR CR45547 - chr3R_15_29355001 chr3R_29355001 RAL-109_125b 3680 chr3R 29376312 29376364 chr3R 29376450 29376502 23 136 6.5 1.5 4.0 4.6 190 chr3R 29376312 intergenic not near genes chr3R 29376407 intergenic not near genes chr3R 29376502 intergenic not near genes chr3R_23_29375001 chr3R_29375001 RAL-109_125b 3681 chr3R 29406574 29406638 chr3R 29407908 29407956 jockey 13 1326 7.5 8.0 7.8 1.5 1382 chr3R 29406574 intron Ptp99A + chr3R 29407265 intron Ptp99A + chr3R 29407956 intron Ptp99A + chr3R_13_29405001 chr3R_29405001 RAL-109_125b 3682 chr3R 29429738 29429804 chr3R 29429866 29429932 23 118 2.0 5.5 3.8 4.8 194 chr3R 29429738 intron Ptp99A + chr3R 29429835 intron Ptp99A + chr3R 29429932 intron Ptp99A + chr3R_23_29425001 chr3R_29425001 RAL-109_125b 3683 chr3R 29452115 29452182 chr3R 29452232 29452309 12 123 4.0 0.5 2.2 3.8 194 chr3R 29452115 intron Ptp99A + chr3R 29452212 intron Ptp99A + chr3R 29452309 intron Ptp99A + chr3R_12_29450001 chr3R_29450001 RAL-109_125b 3684 chr3R 29474379 29474438 chr3R 29474516 29474575 26 136 6.0 7.0 6.5 3.5 196 chr3R 29474379 intron Ptp99A + chr3R 29474477 intron Ptp99A + chr3R 29474575 intron Ptp99A + chr3R_26_29470001 chr3R_29470001 RAL-109_125b 3685 chr3R 29526192 29526242 chr3R 29526329 29526379 19 136 5.5 8.0 6.8 2.4 187 chr3R 29526192 intergenic not near genes chr3R 29526286 intergenic not near genes chr3R 29526379 intergenic not near genes chr3R_19_29525001 chr3R_29525001 RAL-109_125b 3686 chr3R 29539406 29539415 chr3R 29539507 29539530 6 116 13.5 1.5 7.5 0.7 124 chr3R 29539406 intergenic not near genes chr3R 29539468 intergenic not near genes chr3R 29539530 intergenic not near genes chr3R_6_29535001 chr3R_29535001 RAL-109_125b 3687 chr3R 29565727 29565765 chr3R 29565855 29565893 13 127 12.5 7.0 9.8 1.2 166 chr3R 29565727 intergenic Dr + chr3R 29565810 intergenic not near genes chr3R 29565893 intergenic not near genes chr3R_13_29565001 chr3R_29565001 RAL-109_125b 3688 chr3R 29576723 29577002 chr3R 29576875 29577133 18 130 12.0 4.5 8.2 2.0 410 chr3R 29576723 intergenic not near genes chr3R 29576928 intergenic not near genes chr3R 29577133 intergenic not near genes chr3R_18_29575001 chr3R_29575001 RAL-109_125b 3689 chr3R 29581485 29581551 chr3R 29581616 29581682 18 129 10.5 4.0 7.2 2.2 197 chr3R 29581485 intergenic not near genes chr3R 29581584 intergenic not near genes chr3R 29581682 intergenic not near genes chr3R_18_29580001 chr3R_29580001 RAL-109_125b 3690 chr3R 29691563 29691627 chr3R 29691696 29691724 28 131 8.0 8.5 8.2 3.0 161 chr3R 29691563 intergenic not near genes chr3R 29691644 intergenic not near genes chr3R 29691724 intergenic not near genes chr3R_28_29690001 chr3R_29690001 RAL-109_125b 3691 chr3R 29738219 29738293 chr3R 29739736 29739810 hobo 36 1514 7.0 4.5 5.8 5.3 1591 chr3R 29738219 intergenic CG1969 +,CG7598 + chr3R 29739014 intron CG1969 + chr3R 29739810 5` UTR CG1969 + chr3R_36_29735001 chr3R_29735001 RAL-109_125b 3692 chr3R 29754919 29754985 chr3R 29755047 29755112 12 127 2.0 7.0 4.5 2.2 193 chr3R 29754919 intergenic CR44953 -,yata + chr3R 29755016 intergenic CR44953 -,yata + chr3R 29755112 intergenic CR44953 - chr3R_12_29755001 chr3R_29755001 RAL-109_125b 3693 chr3R 29758900 29758906 chr3R 29759026 29759032 4 127 23.0 9.0 16.0 0.2 132 chr3R 29758900 3` UTR CR44953 - chr3R 29758966 3` UTR CR44953 - chr3R 29759032 3` UTR CR44953 - chr3R_4_29755001 chr3R_29755001 RAL-109_125b 3694 chr3R 29758907 29758967 chr3R 29759024 29759095 27 125 10.0 8.5 9.2 2.6 188 chr3R 29758907 3` UTR CR44953 - chr3R 29759001 3` UTR CR44953 - chr3R 29759095 intergenic CR44953 - chr3R_27_29755001 chr3R_29755001 RAL-109_125b 3695 chr3R 29760324 29760388 chr3R 29761575 29761629 pogo 25 1250 5.5 8.5 7.0 3.1 1305 chr3R 29760324 intergenic not near genes chr3R 29760976 intergenic not near genes chr3R 29761629 intergenic not near genes chr3R_25_29760001 chr3R_29760001 RAL-109_125b 3696 chr3R 29881981 29882049 chr3R 29891188 29891246 roo 22 9205 8.0 11.5 9.8 2.0 9265 chr3R 29881981 intron CG31038 + chr3R 29886614 intron CG31038 + chr3R 29891246 intron CG31038 + chr3R_22_29885001 chr3R_29885001 RAL-109_125b 3697 chr3R 29950524 29950598 chr3R 29950651 29950660 26 111 6.5 5.5 6.0 3.7 136 chr3R 29950524 intergenic TkR99D - chr3R 29950592 intergenic TkR99D - chr3R 29950660 intergenic TkR99D - chr3R_26_29950001 chr3R_29950001 RAL-109_125b 3698 chr3R 29966012 29966075 chr3R 29966139 29966195 16 119 9.5 9.5 9.5 1.5 183 chr3R 29966012 intron TkR99D - chr3R 29966104 intron TkR99D - chr3R 29966195 intron TkR99D - chr3R_16_29965001 chr3R_29965001 RAL-109_125b 3699 chr3R 30025228 30025308 chr3R 30025354 30025434 6 126 2.5 3.0 2.8 1.6 206 chr3R 30025228 intron Axn + chr3R 30025331 intron Axn + chr3R 30025434 intron Axn + chr3R_6_30025001 chr3R_30025001 RAL-109_125b 3700 chr3R 30059347 30059425 chr3R 30059483 30059560 25 135 4.0 0.5 2.2 7.8 213 chr3R 30059347 intron sima + chr3R 30059454 intron sima + chr3R 30059560 intron sima + chr3R_25_30055001 chr3R_30055001 RAL-109_125b 3701 chr3R 30081811 30081869 chr3R 30081939 30081978 10 123 2.5 2.0 2.2 3.1 167 chr3R 30081811 intron sima + chr3R 30081894 intron sima + chr3R 30081978 intron sima + chr3R_10_30080001 chr3R_30080001 RAL-109_125b 3702 chr3R 30084809 30084857 chr3R 30086326 30086374 hobo 12 1517 15.5 10.5 13.0 0.9 1565 chr3R 30084809 intron sima + chr3R 30085592 intron sima + chr3R 30086374 intron sima + chr3R_12_30085001 chr3R_30085001 RAL-109_125b 3703 chr3R 30084859 30084880 chr3R 30086318 30086370 hobo 8 1494 12.0 9.5 10.8 0.7 1511 chr3R 30084859 intron sima + chr3R 30085614 intron sima + chr3R 30086370 intron sima + chr3R_8_30085001 chr3R_30085001 RAL-109_125b 3704 chr3R 16589027 16589027 chr3R 30107557 30107579 4 13518537 23.0 17.5 20.2 0.2 13518552 chr3R 16589027 intergenic not near genes chr3R 23348303 intron DNApol-epsilon + chr3R 30107579 intron sima + chr3R_4_23345001 chr3R_23345001 RAL-109_125b 3705 chr3R 30170717 30170783 chr3R 30170854 30170918 26 137 7.5 12.5 10.0 2.4 201 chr3R 30170717 intron CG31028 - chr3R 30170818 intron CG31028 - chr3R 30170918 intron CG31028 - chr3R_26_30170001 chr3R_30170001 RAL-109_125b 3706 chr3R 30177702 30177775 chr3R 30177863 30177942 18 164 5.0 5.0 5.0 3.0 240 chr3R 30177702 intergenic CG1983 -,CG15530 + chr3R 30177822 intergenic CG15530 +,CG1983 - chr3R 30177942 5` UTR CG15530 + chr3R_18_30175001 chr3R_30175001 RAL-109_125b 3707 chr3R 30181061 30181069 chr3R 30181183 30181196 6 125 20.5 9.0 14.8 0.4 135 chr3R 30181061 3` UTR Bet5 + chr3R 30181128 3` UTR Bet5 + chr3R 30181196 3` UTR Bet5 + chr3R_6_30180001 chr3R_30180001 RAL-109_125b 3708 chr3R 30181085 30181127 chr3R 30181180 30181254 18 105 11.0 10.0 10.5 1.6 169 chr3R 30181085 3` UTR Bet5 + chr3R 30181170 3` UTR Bet5 + chr3R 30181254 3` UTR Bet5 + chr3R_18_30180001 chr3R_30180001 RAL-109_125b 3709 chr3R 30183169 30183236 chr3R 30183328 30183395 23 158 10.0 5.0 7.5 2.7 226 chr3R 30183169 intergenic not near genes chr3R 30183282 intergenic not near genes chr3R 30183395 intergenic CR44262 - chr3R_23_30180001 chr3R_30180001 RAL-109_125b 3710 chr3R 30210516 30210668 chr3R 30210662 30210798 13 141 0.0 0.0 0.0 13.0 282 chr3R 30210516 intergenic Anp +,CecA1 + chr3R 30210657 intergenic CecA1 +,Anp + chr3R 30210798 intergenic CecA1 +,Anp + chr3R_13_30210001 chr3R_30210001 RAL-109_125b 3711 chr3R 30238720 30238789 chr3R 30239934 30240003 1360 26 1211 7.5 14.0 10.8 2.2 1283 chr3R 30238720 intergenic not near genes chr3R 30239362 intergenic not near genes chr3R 30240003 intergenic not near genes chr3R_26_30235001 chr3R_30235001 RAL-109_125b 3712 chr3R 30274384 30274406 chr3R 30274525 30274547 4 141 5.0 0.0 2.5 1.1 163 chr3R 30274384 intergenic not near genes chr3R 30274466 intergenic not near genes chr3R 30274547 intergenic not near genes chr3R_4_30270001 chr3R_30270001 RAL-109_125b 3713 chr3R 30287732 30287775 chr3R 30287856 30287908 7 126 7.5 3.0 5.2 1.1 176 chr3R 30287732 intron hdc + chr3R 30287820 intron hdc + chr3R 30287908 intron hdc + chr3R_7_30285001 chr3R_30285001 RAL-109_125b 3714 chr3R 30300681 30300743 chr3R 30300812 30300867 19 128 6.5 12.5 9.5 1.8 186 chr3R 30300681 intron hdc + chr3R 30300774 intron hdc + chr3R 30300867 intron hdc + chr3R_19_30300001 chr3R_30300001 RAL-109_125b 3715 chr3R 30312781 30312817 chr3R 30312905 30312919 9 127 0.5 9.0 4.8 1.6 138 chr3R 30312781 intron hdc + chr3R 30312850 intron hdc + chr3R 30312919 intron hdc + chr3R_9_30310001 chr3R_30310001 RAL-109_125b 3716 chr3R 30315584 30315620 chr3R 30315715 30315747 14 131 20.0 12.5 16.2 0.8 163 chr3R 30315584 intron hdc + chr3R 30315666 intron hdc + chr3R 30315747 intron hdc + chr3R_14_30315001 chr3R_30315001 RAL-109_125b 3717 chr3R 30317280 30317355 chr3R 30324922 30324997 roo 13 7636 2.5 1.5 2.0 4.3 7717 chr3R 30317280 intron hdc + chr3R 30321138 intron hdc + chr3R 30324997 intron hdc + chr3R_13_30320001 chr3R_30320001 RAL-109_125b 3718 chr3R 30346998 30347034 chr3R 30347113 30347169 12 132 7.5 7.0 7.2 1.5 171 chr3R 30346998 intron hdc + chr3R 30347084 intron hdc + chr3R 30347169 intron hdc + chr3R_12_30345001 chr3R_30345001 RAL-109_125b 3719 chr3R 30351377 30351434 chr3R 30351505 30351552 31 126 14.5 11.5 13.0 2.2 175 chr3R 30351377 intron hdc + chr3R 30351464 intron hdc + chr3R 30351552 intron hdc + chr3R_31_30350001 chr3R_30350001 RAL-109_125b 3720 chr3R 30375497 30375559 chr3R 30383172 30383234 412 13 7675 9.0 6.0 7.5 1.5 7737 chr3R 30375497 intergenic not near genes chr3R 30379366 intergenic not near genes chr3R 30383234 intergenic not near genes chr3R_13_30375001 chr3R_30375001 RAL-109_125b 3721 chr3R 30396177 30396184 chr3R 30404493 30404500 roo 5 8316 19.5 7.5 13.5 0.3 8323 chr3R 30396177 intergenic not near genes chr3R 30400338 intergenic not near genes chr3R 30404500 5` UTR CR45570 + chr3R_5_30400001 chr3R_30400001 RAL-109_125b 3722 chr3R 30396185 30396239 chr3R 30404486 30404555 roo 23 8313 8.5 7.0 7.8 2.6 8370 chr3R 30396185 intergenic not near genes chr3R 30400370 intergenic not near genes chr3R 30404555 5` UTR CR45570 + chr3R_23_30400001 chr3R_30400001 RAL-109_125b 3723 chr3R 30445466 30445535 chr3R 30445608 30445677 31 141 6.5 5.5 6.0 4.4 211 chr3R 30445466 intergenic aralar1 -,Osi23 - chr3R 30445572 intergenic aralar1 - chr3R 30445677 3` UTR aralar1 - chr3R_31_30445001 chr3R_30445001 RAL-109_125b 3724 chr3R 30448059 30448137 chr3R 30448187 30448265 11 128 7.0 1.0 4.0 2.2 206 chr3R 30448059 intron aralar1 - chr3R 30448162 intron aralar1 - chr3R 30448265 intron aralar1 - chr3R_11_30445001 chr3R_30445001 RAL-109_125b 3725 chr3R 30480428 30480468 chr3R 30482946 30482986 jockey 17 2512 10.5 9.5 10.0 1.5 2558 chr3R 30480428 intron PH4alphaEFB + chr3R 30481707 intron PH4alphaEFB + chr3R 30482986 intron PH4alphaEFB + chr3R_17_30480001 chr3R_30480001 RAL-109_125b 3726 chr3R 30480470 30480501 chr3R 30482942 30483019 jockey 18 2503 5.5 8.5 7.0 2.2 2549 chr3R 30480470 intron PH4alphaEFB + chr3R 30481744 intron PH4alphaEFB + chr3R 30483019 intron PH4alphaEFB + chr3R_18_30480001 chr3R_30480001 RAL-109_125b 3727 chr3R 30494298 30494362 chr3R 30495329 30495393 5 1031 28.0 24.5 26.2 0.2 1095 chr3R 30494298 intron PH4alphaMP - chr3R 30494846 intron PH4alphaMP - chr3R 30495393 intron PH4alphaMP - chr3R_5_30490001 chr3R_30490001 RAL-109_125b 3728 chr3R 30498346 30498426 chr3R 30498608 30498676 15 253 0.0 9.0 4.5 2.7 330 chr3R 30498346 intron PH4alphaNE1 - chr3R 30498511 intron PH4alphaNE1 - chr3R 30498676 intron PH4alphaNE1 - chr3R_15_30495001 chr3R_30495001 RAL-109_125b 3729 chr3R 30521692 30521712 chr3R 30521831 30521849 4 138 13.5 0.5 7.0 0.5 157 chr3R 30521692 intron jdp - chr3R 30521770 intron jdp - chr3R 30521849 intron jdp - chr3R_4_30520001 chr3R_30520001 RAL-109_125b 3730 chr3R 30539712 30539743 chr3R 30540407 30540438 15 694 0.0 10.5 5.2 2.4 726 chr3R 30539712 intron tmod + chr3R 30540075 intron tmod + chr3R 30540438 intron tmod + chr3R_15_30540001 chr3R_30540001 RAL-109_125b 3731 chr3R 30548968 30549038 chr3R 30549110 30549165 33 140 7.0 6.0 6.5 4.4 197 chr3R 30548968 intron tmod + chr3R 30549066 intron tmod + chr3R 30549165 intron tmod + chr3R_33_30545001 chr3R_30545001 RAL-109_125b 3732 chr3R 30571660 30571710 chr3R 30571789 30571840 12 130 5.0 8.0 6.5 1.6 180 chr3R 30571660 intron tmod + chr3R 30571750 intron tmod + chr3R 30571840 exon tmod + chr3R_12_30570001 chr3R_30570001 RAL-109_125b 3733 chr3R 30627567 30627575 chr3R 30627697 30627705 6 128 20.5 14.0 17.2 0.3 138 chr3R 30627567 3` UTR CG2267 - chr3R 30627636 exon CG2267 - chr3R 30627705 exon CG2267 - chr3R_6_30625001 chr3R_30625001 RAL-109_125b 3734 chr3R 30627585 30627625 chr3R 30627693 30627754 14 118 10.5 13.5 12.0 1.1 169 chr3R 30627585 3` UTR CG2267 - chr3R 30627670 exon CG2267 - chr3R 30627754 exon CG2267 - chr3R_14_30625001 chr3R_30625001 RAL-109_125b 3735 chr3R 30677862 30677872 chr3R 30677982 30677997 4 124 2.0 7.0 4.5 0.7 135 chr3R 30677862 intergenic not near genes chr3R 30677930 intergenic not near genes chr3R 30677997 intergenic not near genes chr3R_4_30675001 chr3R_30675001 RAL-109_125b 3736 chr3R 30679474 30679549 chr3R 30686993 30687044 blood 34 7514 3.5 6.5 5.0 5.7 7570 chr3R 30679474 intergenic not near genes chr3R 30683259 intergenic not near genes chr3R 30687044 intergenic not near genes chr3R_34_30680001 chr3R_30680001 RAL-109_125b 3737 chr3R 30818769 30818792 chr3R 30820384 30820407 1360 12 1615 13.5 9.5 11.5 1.0 1638 chr3R 30818769 intron cindr + chr3R 30819588 intron cindr + chr3R 30820407 intron cindr + chr3R_12_30815001 chr3R_30815001 RAL-109_125b 3738 chr3R 30818793 30818841 chr3R 30820381 30820440 1360 18 1610 6.5 9.0 7.8 2.0 1647 chr3R 30818793 intron cindr + chr3R 30819616 intron cindr + chr3R 30820440 intron cindr + chr3R_18_30815001 chr3R_30815001 RAL-109_125b 3739 chr3R 30831664 30831697 chr3R 30831790 30831823 10 126 5.0 13.0 9.0 1.0 159 chr3R 30831664 intron CG15544 + chr3R 30831744 intron CG15544 + chr3R 30831823 intron CG15544 + chr3R_10_30830001 chr3R_30830001 RAL-109_125b 3740 chr3R 30859356 30859426 chr3R 30859484 30859529 22 126 3.5 5.5 4.5 4.0 173 chr3R 30859356 intergenic not near genes chr3R 30859442 intergenic not near genes chr3R 30859529 intergenic not near genes chr3R_22_30855001 chr3R_30855001 RAL-109_125b 3741 chr3R 30946363 30946408 chr3R 30946509 30946542 5 136 0.5 0.5 0.5 3.3 179 chr3R 30946363 intergenic not near genes chr3R 30946452 intergenic not near genes chr3R 30946542 intergenic not near genes chr3R_5_30945001 chr3R_30945001 RAL-109_125b 3742 chr3R 30955675 30955750 chr3R 30955809 30955844 32 124 6.5 6.5 6.5 4.3 169 chr3R 30955675 intergenic not near genes chr3R 30955760 intergenic not near genes chr3R 30955844 intergenic not near genes chr3R_32_30955001 chr3R_30955001 RAL-109_125b 3743 chr3R 30967246 30967298 chr3R 30967377 30967429 22 130 8.5 8.5 8.5 2.3 183 chr3R 30967246 intergenic not near genes chr3R 30967338 intergenic not near genes chr3R 30967429 intergenic not near genes chr3R_22_30965001 chr3R_30965001 RAL-109_125b 3744 chr3R 30973084 30973159 chr3R 30973295 30973370 15 210 3.0 3.5 3.2 3.6 286 chr3R 30973084 intron 5-HT7 - chr3R 30973227 intron 5-HT7 - chr3R 30973370 intron 5-HT7 - chr3R_15_30970001 chr3R_30970001 RAL-109_125b 3745 chr3R 30982576 30982626 chr3R 30982688 30982735 11 116 2.5 5.0 3.8 2.3 159 chr3R 30982576 intron 5-HT7 - chr3R 30982656 intron 5-HT7 - chr3R 30982735 intron 5-HT7 - chr3R_11_30980001 chr3R_30980001 RAL-109_125b 3746 chr3R 31024116 31024194 chr3R 31024243 31024321 24 127 6.0 6.5 6.2 3.3 205 chr3R 31024116 intergenic not near genes chr3R 31024218 intergenic not near genes chr3R 31024321 intergenic not near genes chr3R_24_31020001 chr3R_31020001 RAL-109_125b 3747 chr3R 31042064 31042144 chr3R 31042201 31042250 34 135 6.0 8.5 7.2 4.1 186 chr3R 31042064 exon CanA1 + chr3R 31042157 intron CanA1 + chr3R 31042250 intron CanA1 + chr3R_34_31040001 chr3R_31040001 RAL-109_125b 3748 chr3R 31069597 31069674 chr3R 31069742 31069814 28 141 7.0 12.5 9.8 2.6 217 chr3R 31069597 intron Sox100B + chr3R 31069706 intron Sox100B + chr3R 31069814 intron Sox100B + chr3R_28_31065001 chr3R_31065001 RAL-109_125b 3749 chr3R 31074191 31074249 chr3R 31081838 31081882 springer 18 7646 4.5 10.0 7.2 2.2 7691 chr3R 31074191 intron Sox100B + chr3R 31078036 intron Sox100B + chr3R 31081882 intron Sox100B + chr3R_18_31075001 chr3R_31075001 RAL-109_125b 3750 chr3R 31090641 31090707 chr3R 31090775 31090841 22 134 6.5 5.0 5.8 3.2 200 chr3R 31090641 intergenic CG11317 - chr3R 31090741 3` UTR CG11317 - chr3R 31090841 3` UTR CG11317 - chr3R_22_31090001 chr3R_31090001 RAL-109_125b 3751 chr3R 31105190 31105248 chr3R 31105497 31105515 23 301 7.0 9.5 8.2 2.5 325 chr3R 31105190 intergenic not near genes chr3R 31105352 intergenic not near genes chr3R 31105515 intergenic not near genes chr3R_23_31105001 chr3R_31105001 RAL-109_125b 3752 chr3R 31109715 31109794 chr3R 31109842 31109894 24 123 4.5 8.0 6.2 3.3 179 chr3R 31109715 intergenic not near genes chr3R 31109804 intergenic not near genes chr3R 31109894 intergenic not near genes chr3R_24_31105001 chr3R_31105001 RAL-109_125b 3753 chr3R 31261976 31262017 chr3R 31262123 31262164 13 144 10.0 12.0 11.0 1.1 188 chr3R 31261976 intergenic CG18672 + chr3R 31262070 intergenic CG18672 + chr3R 31262164 intergenic CG18673 +,CG18672 + chr3R_13_31260001 chr3R_31260001 RAL-109_125b 3754 chr3R 31279333 31279354 chr3R 31285574 31285595 diver 7 6241 23.0 10.0 16.5 0.4 6262 chr3R 31279333 intergenic not near genes chr3R 31282464 intergenic not near genes chr3R 31285595 intergenic not near genes chr3R_7_31280001 chr3R_31280001 RAL-109_125b 3755 chr3R 31279357 31279397 chr3R 31285565 31285603 diver 18 6234 11.0 6.5 8.8 1.8 6246 chr3R 31279357 intergenic not near genes chr3R 31282480 intergenic not near genes chr3R 31285603 intergenic not near genes chr3R_18_31280001 chr3R_31280001 RAL-109_125b 3756 chr3R 31295314 31295377 chr3R 31295450 31295493 21 125 3.5 11.0 7.2 2.6 179 chr3R 31295314 intergenic not near genes chr3R 31295404 intergenic not near genes chr3R 31295493 intergenic not near genes chr3R_21_31295001 chr3R_31295001 RAL-109_125b 3757 chr3R 31413057 31413120 chr3R 31418296 31418359 copia 16 5244 6.5 6.0 6.2 2.2 5302 chr3R 31413057 intron Gprk2 + chr3R 31415708 intron Gprk2 + chr3R 31418359 intron Gprk2 + chr3R_16_31415001 chr3R_31415001 RAL-109_125b 3758 chr3R 31422502 31422556 chr3R 31422633 31422697 28 132 10.5 11.5 11.0 2.3 195 chr3R 31422502 intron Gprk2 + chr3R 31422600 intron Gprk2 + chr3R 31422697 intron Gprk2 + chr3R_28_31420001 chr3R_31420001 RAL-109_125b 3759 chr3R 31426843 31426912 chr3R 31426985 31426989 31 138 6.0 12.0 9.0 3.1 146 chr3R 31426843 intron Gprk2 + chr3R 31426916 intron Gprk2 + chr3R 31426989 intron Gprk2 + chr3R_31_31425001 chr3R_31425001 RAL-109_125b 3760 chr3R 31435318 31435391 chr3R 31435520 31435593 31 200 9.5 8.0 8.8 3.2 275 chr3R 31435318 intron Gprk2 + chr3R 31435456 intron Gprk2 + chr3R 31435593 intron Gprk2 + chr3R_31_31435001 chr3R_31435001 RAL-109_125b 3761 chr3R 31446040 31446101 chr3R 31446176 31446244 27 137 8.0 8.0 8.0 3.0 204 chr3R 31446040 intron Gprk2 + chr3R 31446142 intron Gprk2 + chr3R 31446244 intron Gprk2 + chr3R_27_31445001 chr3R_31445001 RAL-109_125b 3762 chr3R 31448562 31448586 chr3R 31448688 31448692 7 122 13.5 5.0 9.2 0.7 130 chr3R 31448562 intron Gprk2 + chr3R 31448627 intron Gprk2 + chr3R 31448692 intron Gprk2 + chr3R_7_31445001 chr3R_31445001 RAL-109_125b 3763 chr3R 31448588 31448621 chr3R 31448683 31448731 7 110 8.0 5.0 6.5 0.9 143 chr3R 31448588 intron Gprk2 + chr3R 31448660 intron Gprk2 + chr3R 31448731 intron Gprk2 + chr3R_7_31445001 chr3R_31445001 RAL-109_125b 3764 chr3R 31530794 31530815 chr3R 31531150 31531191 4 360 11.0 8.0 9.5 0.4 397 chr3R 31530794 intergenic not near genes chr3R 31530992 intergenic not near genes chr3R 31531191 intergenic not near genes chr3R_4_31530001 chr3R_31530001 RAL-109_125b 3765 chr3R 31530828 31530844 chr3R 31531149 31531195 9 353 6.5 8.0 7.2 1.1 367 chr3R 31530828 intergenic not near genes chr3R 31531012 intergenic not near genes chr3R 31531195 intergenic not near genes chr3R_9_31530001 chr3R_31530001 RAL-109_125b 3766 chr3R 31539297 31539345 chr3R 31539428 31539480 13 129 6.5 7.5 7.0 1.6 183 chr3R 31539297 intergenic not near genes chr3R 31539388 intergenic not near genes chr3R 31539480 intergenic not near genes chr3R_13_31535001 chr3R_31535001 RAL-109_125b 3767 chr3R 31539815 31539885 chr3R 31539950 31540020 22 134 4.5 10.5 7.5 2.6 205 chr3R 31539815 intergenic not near genes chr3R 31539918 intergenic not near genes chr3R 31540020 intergenic not near genes chr3R_22_31535001 chr3R_31535001 RAL-109_125b 3768 chr3R 31548858 31548890 chr3R 31548993 31549006 8 132 17.0 22.0 19.5 0.4 148 chr3R 31548858 intron nyo + chr3R 31548932 intron nyo + chr3R 31549006 intron nyo + chr3R_8_31545001 chr3R_31545001 RAL-109_125b 3769 chr3R 31610077 31610134 chr3R 31610213 31610270 26 133 8.5 13.5 11.0 2.2 193 chr3R 31610077 intron CycG - chr3R 31610174 intron CycG - chr3R 31610270 intron CycG - chr3R_26_31610001 chr3R_31610001 RAL-109_125b 3770 chr3R 31649072 31649094 chr3R 31649322 31649342 9 249 18.5 6.5 12.5 0.7 270 chr3R 31649072 intron kek6 + chr3R 31649207 intron kek6 + chr3R 31649342 intron kek6 + chr3R_9_31645001 chr3R_31645001 RAL-109_125b 3771 chr3R 31649101 31649143 chr3R 31649320 31649392 22 247 10.0 6.0 8.0 2.4 291 chr3R 31649101 intron kek6 + chr3R 31649246 intron kek6 + chr3R 31649392 intron kek6 + chr3R_22_31645001 chr3R_31645001 RAL-109_125b 3772 chr3R 31691494 31691545 chr3R 31696310 31696361 Doc 25 4813 12.5 11.5 12.0 1.9 4867 chr3R 31691494 intergenic not near genes chr3R 31693928 intergenic not near genes chr3R 31696361 intergenic not near genes chr3R_25_31690001 chr3R_31690001 RAL-109_125b 3773 chr3R 31805103 31805154 chr3R 31805206 31805277 7 120 12.0 12.0 12.0 0.5 174 chr3R 31805103 exon CG42233 - chr3R 31805190 5` UTR CG42233 - chr3R 31805277 5` UTR CG42233 - chr3R_7_31805001 chr3R_31805001 RAL-109_125b 3774 chr3R 31831490 31831564 chr3R 31831618 31831667 24 122 3.5 8.0 5.8 3.5 177 chr3R 31831490 intron RhoGAP100F + chr3R 31831578 intron RhoGAP100F + chr3R 31831667 intron RhoGAP100F + chr3R_24_31830001 chr3R_31830001 RAL-109_125b 3775 chr3R 31878585 31878591 chr3R 31878733 31878738 4 148 18.5 0.0 9.2 0.4 153 chr3R 31878585 intron heph - chr3R 31878662 intron heph - chr3R 31878738 intron heph - chr3R_4_31875001 chr3R_31875001 RAL-109_125b 3776 chr3R 31878593 31878644 chr3R 31878718 31878783 12 137 6.0 0.0 3.0 3.0 190 chr3R 31878593 intron heph - chr3R 31878688 intron heph - chr3R 31878783 intron heph - chr3R_12_31875001 chr3R_31875001 RAL-109_125b 3777 chr3R 31881262 31881267 chr3R 31881381 31881401 5 127 17.5 7.0 12.2 0.4 139 chr3R 31881262 intron heph - chr3R 31881332 intron heph - chr3R 31881401 intron heph - chr3R_5_31880001 chr3R_31880001 RAL-109_125b 3778 chr3R 31881268 31881313 chr3R 31881372 31881447 15 123 8.0 5.5 6.8 1.9 179 chr3R 31881268 intron heph - chr3R 31881358 intron heph - chr3R 31881447 intron heph - chr3R_15_31880001 chr3R_31880001 RAL-109_125b 3779 chr3R 31911635 31911647 chr3R 31911771 31911775 4 134 22.5 10.0 16.2 0.2 140 chr3R 31911635 intron heph - chr3R 31911705 intron heph - chr3R 31911775 intron heph - chr3R_4_31910001 chr3R_31910001 RAL-109_125b 3780 chr3R 31911667 31911709 chr3R 31911763 31911775 12 120 11.0 8.5 9.8 1.1 108 chr3R 31911667 intron heph - chr3R 31911721 intron heph - chr3R 31911775 intron heph - chr3R_12_31910001 chr3R_31910001 RAL-109_125b 3781 chr3R 31931143 31931215 chr3R 31931276 31931348 36 131 7.5 6.0 6.8 4.6 205 chr3R 31931143 intron heph - chr3R 31931246 intron heph - chr3R 31931348 intron heph - chr3R_36_31930001 chr3R_31930001 RAL-109_125b 3782 chr3R 31971380 31971437 chr3R 31971507 31971564 15 127 13.0 11.5 12.2 1.1 184 chr3R 31971380 intron heph - chr3R 31971472 intron heph - chr3R 31971564 intron heph - chr3R_15_31970001 chr3R_31970001 RAL-109_125b 3783 chr3R 31991061 31991133 chr3R 31991190 31991261 29 128 8.0 5.0 6.5 3.9 200 chr3R 31991061 intron heph - chr3R 31991161 intron heph - chr3R 31991261 intron heph - chr3R_29_31990001 chr3R_31990001 RAL-109_125b 3784 chr3R 31997852 31997925 chr3R 32005580 32005653 blood 29 7725 1.5 8.5 5.0 4.8 7801 chr3R 31997852 intron heph - chr3R 32001752 intron heph - chr3R 32005653 intron heph - chr3R_29_32000001 chr3R_32000001 RAL-109_125b 3785 chr3R 32022281 32022291 chr3R 32022433 32022443 4 150 20.0 13.5 16.8 0.2 162 chr3R 32022281 5` UTR CR45557 + chr3R 32022362 5` UTR CR45557 + chr3R 32022443 5` UTR CR45557 + chr3R_4_32020001 chr3R_32020001 RAL-109_125b 3786 chr3R 32022300 32022352 chr3R 32022430 32022504 25 145 5.5 12.0 8.8 2.6 204 chr3R 32022300 5` UTR CR45557 + chr3R 32022402 5` UTR CR45557 + chr3R 32022504 5` UTR CR45557 + chr3R_25_32020001 chr3R_32020001 RAL-109_125b 3787 chr3R 32045543 32045598 chr3R 32045674 32045729 23 130 9.5 14.0 11.8 1.8 186 chr3R 32045543 3` UTR krz - chr3R 32045636 3` UTR krz - chr3R 32045729 3` UTR krz - chr3R_23_32045001 chr3R_32045001 RAL-109_125b 3788 chr4 76461 76506 chr4 81953 81982 I-element 14 5490 12.5 9.5 11.0 1.2 5521 chr4 76461 intron pan + chr4 79222 intron pan + chr4 81982 intron pan + chr4_14_75001 chr4_75001 RAL-109_125b 3789 chr4 319947 320014 chr4 328173 328240 Stalker2 18 8224 5.5 2.0 3.8 3.8 8293 chr4 319947 3` UTR CG32850 + chr4 324094 intron CG32850 + chr4 328240 3` UTR,3` UTR CG32850 +,PMCA - chr4_18_320001 chr4_320001 RAL-109_125b 3790 chr4 662141 662206 chr4 662836 662895 INE-1 21 692 8.0 6.0 7.0 2.6 754 chr4 662141 intron gw - chr4 662518 intron gw - chr4 662895 5` UTR gw - chr4_21_660001 chr4_660001 RAL-109_125b 3791 chr4 671564 671583 chr4 680197 680216 Tirant 8 8631 19.5 10.0 14.8 0.5 8652 chr4 671564 intron CG11360 + chr4 675890 intron CG11360 + chr4 680216 intron CG11360 + chr4_8_675001 chr4_675001 RAL-109_125b 3792 chr4 671584 671627 chr4 680192 680259 Tirant 19 8630 7.5 7.0 7.2 2.3 8675 chr4 671584 intron CG11360 + chr4 675922 intron CG11360 + chr4 680259 intron CG11360 + chr4_19_675001 chr4_675001 RAL-109_125b 3793 chr4 706633 706661 chr4 706826 706844 4 186 38.0 39.5 38.8 0.1 211 chr4 706633 intron ey + chr4 706738 intron ey + chr4 706844 intron ey + chr4_4_705001 chr4_705001 RAL-109_125b 3794 chr4 852866 852926 chr4 853280 853335 16 410 5.0 13.0 9.0 1.6 469 chr4 852866 intergenic not near genes chr4 853100 intergenic not near genes chr4 853335 intergenic CG11148 - chr4_16_850001 chr4_850001 RAL-109_125b 3795 chr4 853289 853324 chr4 853593 853667 18 313 31.5 49.5 40.5 0.4 378 chr4 853289 intergenic CG11148 - chr4 853478 intergenic CG11148 - chr4 853667 intergenic CG11148 - chr4_18_850001 chr4_850001 RAL-109_125b 3796 chr4 958021 958085 chr4 958161 958225 5 140 6.0 0.5 3.2 1.2 204 chr4 958021 exon 4E-T - chr4 958123 5` UTR 4E-T - chr4 958225 intron 4E-T - chr4_5_955001 chr4_955001 RAL-109_125b 3797 chrX 295809 295871 chrX 303479 303541 412 24 7664 4.0 5.0 4.5 4.4 7732 chrX 295809 intron CG3777 + chrX 299675 intron CG3777 + chrX 303541 intron CG3777 + chrX_24_295001 chrX_295001 RAL-109_125b 3798 chrX 318428 318492 chrX 323564 323621 flea 24 5136 9.5 12.0 10.8 2.0 5193 chrX 318428 intron,intron CG3777 +,CG32816 - chrX 321024 intron,intron CG3777 +,CG32816 - chrX 323621 intron,intron CG3777 +,CG32816 - chrX_24_320001 chrX_320001 RAL-109_125b 3799 chrX 405496 405571 chrX 407783 407832 16 2282 28.0 26.5 27.2 0.6 2336 chrX 405496 intron CG32816 - chrX 406664 intron CG32816 - chrX 407832 intron CG32816 - chrX_16_405001 chrX_405001 RAL-109_125b 3800 chrX 405366 405423 chrX 407828 407890 15 2463 41.0 30.0 35.5 0.4 2524 chrX 405366 intron CG32816 - chrX 406628 intron CG32816 - chrX 407890 intron CG32816 - chrX_15_405001 chrX_405001 RAL-109_125b 3801 chrX 428378 428440 chrX 434613 434675 3S18 26 6234 10.0 6.5 8.2 2.8 6297 chrX 428378 intron CG32816 - chrX 431526 intron CG32816 - chrX 434675 intron CG32816 - chrX_26_430001 chrX_430001 RAL-109_125b 3802 chrX 494571 494598 chrX 494713 494740 8 136 10.5 12.5 11.5 0.6 169 chrX 494571 intergenic CG17778 + chrX 494656 5` UTR CG17778 + chrX 494740 intron CG17778 + chrX_8_490001 chrX_490001 RAL-109_125b 3803 chrX 494600 494624 chrX 494692 494766 9 129 7.0 7.5 7.2 1.1 166 chrX 494600 intergenic CG17778 + chrX 494683 5` UTR CG17778 + chrX 494766 intron CG17778 + chrX_9_490001 chrX_490001 RAL-109_125b 3804 chrX 536303 536360 chrX 536958 537017 30 659 8.5 8.0 8.2 3.3 714 chrX 536303 intron Appl + chrX 536660 intron Appl + chrX 537017 intron Appl + chrX_30_535001 chrX_535001 RAL-109_125b 3805 chrX 547588 547656 chrX 547882 547920 30 289 11.0 7.5 9.2 2.9 332 chrX 547588 intron Appl + chrX 547754 intron Appl + chrX 547920 intron Appl + chrX_30_545001 chrX_545001 RAL-109_125b 3806 chrX 551400 551447 chrX 558992 559059 412 14 7603 6.5 7.0 6.8 1.8 7659 chrX 551400 intron Appl + chrX 555230 intron Appl + chrX 559059 intron Appl + chrX_14_555001 chrX_555001 RAL-109_125b 3807 chrX 617932 618004 chrX 618062 618134 30 128 6.0 5.5 5.8 4.4 202 chrX 617932 intron CG13366 - chrX 618033 intron CG13366 - chrX 618134 intron CG13366 - chrX_30_615001 chrX_615001 RAL-109_125b 3808 chrX 667609 667670 chrX 667743 667804 20 133 11.0 1.0 6.0 2.9 195 chrX 667609 intergenic not near genes chrX 667706 intergenic not near genes chrX 667804 intergenic not near genes chrX_20_665001 chrX_665001 RAL-109_125b 3809 chrX 670213 670274 chrX 670345 670387 13 129 0.0 3.0 1.5 5.2 174 chrX 670213 intergenic not near genes chrX 670300 intergenic not near genes chrX 670387 intergenic not near genes chrX_13_670001 chrX_670001 RAL-109_125b 3810 chrX 680788 680862 chrX 680921 680985 19 125 7.5 4.5 6.0 2.7 197 chrX 680788 intergenic not near genes chrX 680886 intergenic not near genes chrX 680985 intergenic not near genes chrX_19_680001 chrX_680001 RAL-109_125b 3811 chrX 695253 695271 chrX 695380 695393 7 124 16.5 8.5 12.5 0.5 140 chrX 695253 intron sdk + chrX 695323 intron sdk + chrX 695393 intron sdk + chrX_7_695001 chrX_695001 RAL-109_125b 3812 chrX 695276 695321 chrX 695376 695431 12 114 8.5 9.5 9.0 1.2 155 chrX 695276 intron sdk + chrX 695354 intron sdk + chrX 695431 intron sdk + chrX_12_695001 chrX_695001 RAL-109_125b 3813 chrX 706742 706814 chrX 707164 707228 14 417 0.0 7.0 3.5 3.1 486 chrX 706742 intron sdk + chrX 706985 intron sdk + chrX 707228 intron sdk + chrX_14_705001 chrX_705001 RAL-109_125b 3814 chrX 715192 715207 chrX 715407 715416 5 212 15.5 6.0 10.8 0.4 224 chrX 715192 intron sdk + chrX 715304 intron sdk + chrX 715416 intron sdk + chrX_5_715001 chrX_715001 RAL-109_125b 3815 chrX 715214 715223 chrX 715403 715411 4 192 14.5 5.0 9.8 0.4 197 chrX 715214 intron sdk + chrX 715312 intron sdk + chrX 715411 intron sdk + chrX_4_715001 chrX_715001 RAL-109_125b 3816 chrX 715228 715259 chrX 715393 715425 18 187 8.0 4.0 6.0 2.6 197 chrX 715228 intron sdk + chrX 715326 intron sdk + chrX 715425 intron sdk + chrX_18_715001 chrX_715001 RAL-109_125b 3817 chrX 778092 778102 chrX 778231 778242 4 140 17.5 0.0 8.8 0.4 150 chrX 778092 intron fz3 + chrX 778167 intron fz3 + chrX 778242 intron fz3 + chrX_4_775001 chrX_775001 RAL-109_125b 3818 chrX 778103 778159 chrX 778227 778289 10 128 7.0 0.0 3.5 2.2 186 chrX 778103 intron fz3 + chrX 778196 intron fz3 + chrX 778289 intron fz3 + chrX_10_775001 chrX_775001 RAL-109_125b 3819 chrX 806742 806764 chrX 806888 806910 5 146 12.0 4.5 8.2 0.5 168 chrX 806742 exon Sec22 + chrX 806826 intron Sec22 + chrX 806910 intron Sec22 + chrX_5_805001 chrX_805001 RAL-109_125b 3820 chrX 806775 806816 chrX 806879 806941 13 132 5.5 4.0 4.8 2.2 166 chrX 806775 intron Sec22 + chrX 806858 intron Sec22 + chrX 806941 intron Sec22 + chrX_13_805001 chrX_805001 RAL-109_125b 3821 chrX 812225 812293 chrX 817906 817925 297 14 5671 9.5 10.0 9.8 1.3 5700 chrX 812225 intron CG43867 - chrX 815075 intron CG43867 - chrX 817925 intron CG43867 - chrX_14_815001 chrX_815001 RAL-109_125b 3822 chrX 827559 827635 chrX 835401 835497 roo 17 7858 9.5 0.0 4.8 2.9 7938 chrX 827559 intron CG43867 - chrX 831528 intron CG43867 - chrX 835497 intron CG43867 - chrX_17_830001 chrX_830001 RAL-109_125b 3823 chrX 888667 888675 chrX 888796 888804 4 129 8.5 0.0 4.2 0.8 137 chrX 888667 intron CG43867 - chrX 888736 intron CG43867 - chrX 888804 intron CG43867 - chrX_4_885001 chrX_885001 RAL-109_125b 3824 chrX 906660 906689 chrX 908498 908498 S-element 10 1836 13.0 7.5 10.2 0.9 1838 chrX 906660 intron CG43867 - chrX 907579 intron CG43867 - chrX 908498 intron CG43867 - chrX_10_905001 chrX_905001 RAL-109_125b 3825 chrX 906690 906732 chrX 908493 908540 S-element 21 1828 6.0 6.5 6.2 2.9 1850 chrX 906690 intron CG43867 - chrX 907615 intron CG43867 - chrX 908540 intron CG43867 - chrX_21_905001 chrX_905001 RAL-109_125b 3826 chrX 949088 949119 chrX 949231 949265 11 146 7.5 13.5 10.5 1.0 177 chrX 949088 3` UTR CG3690 - chrX 949176 3` UTR CG3690 - chrX 949265 3` UTR CG3690 - chrX_11_945001 chrX_945001 RAL-109_125b 3827 chrX 1024402 1024463 chrX 1024534 1024584 19 130 3.5 6.0 4.8 3.3 182 chrX 1024402 intron,intron,intron su(w[a]) +,CG11638 -,CG32814 - chrX 1024493 intron,intron,intron su(w[a]) +,CG11638 -,CG32814 - chrX 1024584 intron,intron,intron su(w[a]) +,CG11638 -,CG32814 - chrX_19_1020001 chrX_1020001 RAL-109_125b 3828 chrX 1053117 1053123 chrX 16983073 16983076 9 15929956 21.5 20.5 21.0 0.4 15929959 chrX 1053117 intron CR44779 + chrX 9018096 intron,intron rdgA +,CR43836 - chrX 16983076 intron CG45002 - chrX_9_9015001 chrX_9015001 RAL-109_125b 3829 chrX 1063723 1063750 chrX 1072566 1072593 roo 8 8843 9.0 8.0 8.5 0.8 8870 chrX 1063723 intron CR44779 + chrX 1068158 intron CR44779 + chrX 1072593 intron CR44779 + chrX_8_1065001 chrX_1065001 RAL-109_125b 3830 chrX 1218481 1218488 chrX 1218625 1218632 5 144 10.5 19.5 15.0 0.3 151 chrX 1218481 3` UTR CG3638 - chrX 1218556 3` UTR CG3638 - chrX 1218632 3` UTR CG3638 - chrX_5_1215001 chrX_1215001 RAL-109_125b 3831 chrX 1357741 1357747 chrX 1367959 1367967 Doc 4 10219 20.0 9.0 14.5 0.3 10226 chrX 1357741 intergenic png - chrX 1362854 intergenic not near genes chrX 1367967 intergenic not near genes chrX_4_1360001 chrX_1360001 RAL-109_125b 3832 chrX 1357748 1357803 chrX 1367956 1367972 Doc 8 10212 8.5 8.0 8.2 0.9 10224 chrX 1357748 intergenic png - chrX 1362860 intergenic not near genes chrX 1367972 intergenic not near genes chrX_8_1360001 chrX_1360001 RAL-109_125b 3833 chrX 1416348 1416424 chrX 1416477 1416535 19 121 3.5 7.0 5.2 3.1 187 chrX 1416348 intron futsch + chrX 1416442 intron futsch + chrX 1416535 intron futsch + chrX_19_1415001 chrX_1415001 RAL-109_125b 3834 chrX 1517996 1518009 chrX 1523448 1523455 jockey 4 5450 16.0 12.5 14.2 0.3 5459 chrX 1517996 intergenic inc + chrX 1520726 intergenic not near genes chrX 1523455 intergenic not near genes chrX_4_1520001 chrX_1520001 RAL-109_125b 3835 chrX 1518017 1518061 chrX 1523437 1523510 jockey 18 5446 7.5 9.5 8.5 1.9 5493 chrX 1518017 intergenic inc + chrX 1520764 intergenic not near genes chrX 1523510 intergenic not near genes chrX_18_1520001 chrX_1520001 RAL-109_125b 3836 chrX 1560609 1560658 chrX 1560751 1560773 15 134 7.5 4.0 5.8 2.2 164 chrX 1560609 intron Mur2B - chrX 1560691 intron Mur2B - chrX 1560773 intron Mur2B - chrX_15_1560001 chrX_1560001 RAL-109_125b 3837 chrX 1627275 1627310 chrX 1627394 1627417 10 117 9.5 13.5 11.5 0.8 142 chrX 1627275 intron,intron Mur2B -,br + chrX 1627346 intron,intron Mur2B -,br + chrX 1627417 intron,intron Mur2B -,br + chrX_10_1625001 chrX_1625001 RAL-109_125b 3838 chrX 1830579 1830655 chrX 1830786 1830864 17 206 5.0 6.0 5.5 2.6 285 chrX 1830579 intron CG42666 + chrX 1830722 intron CG42666 + chrX 1830864 intron CG42666 + chrX_17_1830001 chrX_1830001 RAL-109_125b 3839 chrX 1930496 1930554 chrX 1938117 1938175 opus 25 7620 7.5 3.5 5.5 3.8 7679 chrX 1930496 3` UTR CG11596 + chrX 1934336 intergenic not near genes chrX 1938175 3` UTR CG3857 - chrX_25_1930001 chrX_1930001 RAL-109_125b 3840 chrX 1954874 1954883 chrX 1962852 1962872 Stalker2 4 7980 12.5 8.5 10.5 0.3 7998 chrX 1954874 intron Hr4 + chrX 1958873 intron Hr4 + chrX 1962872 intron Hr4 + chrX_4_1955001 chrX_1955001 RAL-109_125b 3841 chrX 1954886 1954915 chrX 1962824 1962873 Stalker2 9 7963 7.0 2.5 4.8 1.6 7987 chrX 1954886 intron Hr4 + chrX 1958880 intron Hr4 + chrX 1962873 intron Hr4 + chrX_9_1955001 chrX_1955001 RAL-109_125b 3842 chrX 1963710 1963740 chrX 1963846 1963876 6 129 11.0 7.5 9.2 0.6 166 chrX 1963710 intron Hr4 + chrX 1963793 intron Hr4 + chrX 1963876 intron Hr4 + chrX_6_1960001 chrX_1960001 RAL-109_125b 3843 chrX 1963744 1963776 chrX 1963840 1963880 11 104 6.5 7.0 6.8 1.4 136 chrX 1963744 intron Hr4 + chrX 1963812 intron Hr4 + chrX 1963880 intron Hr4 + chrX_11_1960001 chrX_1960001 RAL-109_125b 3844 chrX 2082132 2082181 chrX 2082277 2082327 10 139 8.0 7.5 7.8 1.1 195 chrX 2082132 intron Unc-76 + chrX 2082230 intron Unc-76 + chrX 2082327 intron Unc-76 + chrX_10_2080001 chrX_2080001 RAL-109_125b 3845 chrX 2082183 2082197 chrX 2082270 2082333 5 129 5.0 6.5 5.8 0.7 150 chrX 2082183 intron Unc-76 + chrX 2082258 intron Unc-76 + chrX 2082333 intron Unc-76 + chrX_5_2080001 chrX_2080001 RAL-109_125b 3846 chrX 2126017 2126079 chrX 2126150 2126212 19 132 7.5 5.5 6.5 2.5 195 chrX 2126017 intergenic ph-p - chrX 2126114 intergenic ph-p - chrX 2126212 3` UTR ph-p - chrX_19_2125001 chrX_2125001 RAL-109_125b 3847 chrX 2308797 2308816 chrX 2317428 2317449 Tirant 7 8632 7.0 15.0 11.0 0.6 8652 chrX 2308797 intron phl + chrX 2313123 intron phl + chrX 2317449 intron phl + chrX_7_2310001 chrX_2310001 RAL-109_125b 3848 chrX 2399808 2399861 chrX 2408192 2408245 roo 13 8383 8.0 0.0 4.0 2.6 8437 chrX 2399808 intergenic not near genes chrX 2404026 intergenic not near genes chrX 2408245 intergenic not near genes chrX_13_2400001 chrX_2400001 RAL-109_125b 3849 chrX 2429600 2429664 chrX 2429731 2429795 16 127 0.0 4.5 2.2 5.0 195 chrX 2429600 intergenic not near genes chrX 2429698 intergenic not near genes chrX 2429795 intergenic not near genes chrX_16_2425001 chrX_2425001 RAL-109_125b 3850 chrX 2471234 2471252 chrX 2471360 2471378 4 126 1.5 5.5 3.5 0.9 144 chrX 2471234 intron trol - chrX 2471306 intron trol - chrX 2471378 intron trol - chrX_4_2470001 chrX_2470001 RAL-109_125b 3851 chrX 2506466 2506489 chrX 2506597 2506620 10 130 0.0 9.0 4.5 1.8 154 chrX 2506466 intron trol - chrX 2506543 intron trol - chrX 2506620 intron trol - chrX_10_2505001 chrX_2505001 RAL-109_125b 3852 chrX 2559322 2559386 chrX 2559460 2559464 12 130 7.0 9.0 8.0 1.3 142 chrX 2559322 intron Pdfr + chrX 2559393 intron Pdfr + chrX 2559464 intron Pdfr + chrX_12_2555001 chrX_2555001 RAL-109_125b 3853 chrX 2578770 2578780 chrX 2578911 2578911 4 139 7.5 8.0 7.8 0.5 141 chrX 2578770 intergenic Pdfr +,Vha36-3 - chrX 2578840 intergenic Pdfr +,Vha36-3 - chrX 2578911 intergenic Vha36-3 -,Pdfr + chrX_4_2575001 chrX_2575001 RAL-109_125b 3854 chrX 2578781 2578815 chrX 2578910 2578957 16 140 6.5 8.0 7.2 2.0 176 chrX 2578781 intergenic Pdfr +,Vha36-3 - chrX 2578869 intergenic Vha36-3 -,Pdfr + chrX 2578957 intergenic Vha36-3 -,Pdfr + chrX_16_2575001 chrX_2575001 RAL-109_125b 3855 chrX 2578816 2578835 chrX 2578904 2578966 10 130 6.0 6.5 6.2 1.4 150 chrX 2578816 intergenic Pdfr +,Vha36-3 - chrX 2578891 intergenic Vha36-3 -,Pdfr + chrX 2578966 intergenic Vha36-3 -,Pdfr + chrX_10_2575001 chrX_2575001 RAL-109_125b 3856 chrX 2610342 2610407 chrX 2617509 2617574 HMS-Beagle 14 7166 5.5 3.5 4.5 2.5 7232 chrX 2610342 intergenic CG8636 - chrX 2613958 intergenic not near genes chrX 2617574 intergenic Tsp3A - chrX_14_2610001 chrX_2610001 RAL-109_125b 3857 chrX 2664328 2664402 chrX 2665534 2665599 1360 14 1201 4.5 0.0 2.2 4.4 1271 chrX 2664328 intron sgg + chrX 2664964 intron sgg + chrX 2665599 intron sgg + chrX_14_2660001 chrX_2660001 RAL-109_125b 3858 chrX 2759814 2759888 chrX 2759953 2760027 29 138 4.5 3.0 3.8 6.0 213 chrX 2759814 intron kirre + chrX 2759920 intron kirre + chrX 2760027 intron kirre + chrX_29_2755001 chrX_2755001 RAL-109_125b 3859 chrX 2801145 2801216 chrX 2801496 2801566 22 343 10.5 4.0 7.2 2.7 421 chrX 2801145 intron kirre + chrX 2801356 intron kirre + chrX 2801566 intron kirre + chrX_22_2800001 chrX_2800001 RAL-109_125b 3860 chrX 2823773 2823778 chrX 2832339 2832376 roo 4 8583 7.0 4.5 5.8 0.6 8603 chrX 2823773 intron kirre + chrX 2828074 intron kirre + chrX 2832376 intron kirre + chrX_4_2825001 chrX_2825001 RAL-109_125b 3861 chrX 2834516 2834576 chrX 2834654 2834714 13 136 2.5 5.5 4.0 2.6 198 chrX 2834516 intron kirre + chrX 2834615 intron kirre + chrX 2834714 intron kirre + chrX_13_2830001 chrX_2830001 RAL-109_125b 3862 chrX 2840293 2840351 chrX 2840402 2840454 21 124 7.0 5.5 6.2 2.9 161 chrX 2840293 intron kirre + chrX 2840374 intron kirre + chrX 2840454 intron kirre + chrX_21_2840001 chrX_2840001 RAL-109_125b 3863 chrX 2844853 2844924 chrX 2852309 2852384 mdg1 21 7460 5.0 5.5 5.2 3.4 7531 chrX 2844853 intron kirre + chrX 2848618 intron kirre + chrX 2852384 intron kirre + chrX_21_2845001 chrX_2845001 RAL-109_125b 3864 chrX 2866471 2866537 chrX 2868168 2868232 22 1698 4.0 7.0 5.5 3.4 1761 chrX 2866471 intron kirre + chrX 2867352 intron kirre + chrX 2868232 intron kirre + chrX_22_2865001 chrX_2865001 RAL-109_125b 3865 chrX 2888062 2888140 chrX 2888190 2888268 19 125 11.5 10.0 10.8 1.6 206 chrX 2888062 intron kirre + chrX 2888165 intron kirre + chrX 2888268 intron kirre + chrX_19_2885001 chrX_2885001 RAL-109_125b 3866 chrX 2932612 2932664 chrX 2932927 2932978 9 307 4.5 5.5 5.0 1.5 366 chrX 2932612 intron,3` UTR kirre +,CG32793 + chrX 2932795 intron kirre + chrX 2932978 intron kirre + chrX_9_2930001 chrX_2930001 RAL-109_125b 3867 chrX 3057979 3058047 chrX 3058270 3058297 pogo 16 288 6.0 2.5 4.2 3.1 318 chrX 3057979 intron kirre + chrX 3058138 intron kirre + chrX 3058297 intron kirre + chrX_16_3055001 chrX_3055001 RAL-109_125b 3868 chrX 3075611 3075658 chrX 3080953 3081014 Transpac 15 5355 6.5 9.5 8.0 1.7 5403 chrX 3075611 intron kirre + chrX 3078312 intron kirre + chrX 3081014 intron kirre + chrX_15_3075001 chrX_3075001 RAL-109_125b 3869 chrX 3082546 3082601 chrX 3082673 3082713 14 118 8.5 6.0 7.2 1.7 167 chrX 3082546 intron kirre + chrX 3082630 intron kirre + chrX 3082713 intron kirre + chrX_14_3080001 chrX_3080001 RAL-109_125b 3870 chrX 3206445 3206495 chrX 3206574 3206619 5 128 2.5 8.5 5.5 0.8 174 chrX 3206445 intron dnc + chrX 3206532 intron dnc + chrX 3206619 intron dnc + chrX_5_3205001 chrX_3205001 RAL-109_125b 3871 chrX 3243619 3243639 chrX 3243759 3243779 9 140 7.0 9.5 8.2 1.0 160 chrX 3243619 intron dnc + chrX 3243699 intron dnc + chrX 3243779 intron dnc + chrX_9_3240001 chrX_3240001 RAL-109_125b 3872 chrX 3351757 3351781 chrX 3351893 3351912 4 135 12.5 10.5 11.5 0.3 155 chrX 3351757 intergenic not near genes chrX 3351834 intergenic not near genes chrX 3351912 intergenic not near genes chrX_4_3350001 chrX_3350001 RAL-109_125b 3873 chrX 3351786 3351811 chrX 3351890 3351944 8 109 7.0 9.5 8.2 0.9 158 chrX 3351786 intergenic not near genes chrX 3351865 intergenic not near genes chrX 3351944 intergenic not near genes chrX_8_3350001 chrX_3350001 RAL-109_125b 3874 chrX 3399982 3400023 chrX 3400132 3400145 8 140 11.5 0.5 6.0 1.1 163 chrX 3399982 intron,intron CR44999 +,CG12535 - chrX 3400064 intron,intron CR44999 +,CG12535 - chrX 3400145 intron,intron CR44999 +,CG12535 - chrX_8_3400001 chrX_3400001 RAL-109_125b 3875 chrX 3414303 3414357 chrX 3414480 3414501 10 170 4.5 0.5 2.5 2.9 198 chrX 3414303 intron,intron CR44999 +,CG12535 - chrX 3414402 intron,intron CR44999 +,CG12535 - chrX 3414501 intron,intron CR44999 +,CG12535 - chrX_10_3410001 chrX_3410001 RAL-109_125b 3876 chrX 3415006 3415042 chrX 3421209 3421276 3S18 7 6228 5.5 5.0 5.2 1.1 6270 chrX 3415006 intron,intron CR44999 +,CG12535 - chrX 3418141 intron,intron CR44999 +,CG12535 - chrX 3421276 intron,intron CR44999 +,CG12535 - chrX_7_3415001 chrX_3415001 RAL-109_125b 3877 chrX 3493052 3493094 chrX 3502260 3502303 roo 10 9207 7.0 5.0 6.0 1.4 9251 chrX 3493052 intron,intron CR44999 +,Gas8 - chrX 3497678 intron,intron CR44999 +,Gas8 - chrX 3502303 intron,intron CR44999 +,Gas8 - chrX_10_3495001 chrX_3495001 RAL-109_125b 3878 chrX 3508909 3508958 chrX 3509058 3509095 8 154 5.5 8.0 6.8 1.0 186 chrX 3508909 intron CR44999 + chrX 3509002 intron CR44999 + chrX 3509095 intron CR44999 + chrX_8_3505001 chrX_3505001 RAL-109_125b 3879 chrX 3513716 3513789 chrX 3513849 3513922 21 130 7.5 7.5 7.5 2.5 206 chrX 3513716 intron,intron CR44999 +,CG32791 - chrX 3513819 intron,intron CR44999 +,CG32791 - chrX 3513922 intron,intron CR44999 +,CG32791 - chrX_21_3510001 chrX_3510001 RAL-109_125b 3880 chrX 3535374 3535381 chrX 3535515 3535522 8 141 16.0 8.5 12.2 0.6 148 chrX 3535374 intron CG32791 - chrX 3535448 intron CG32791 - chrX 3535522 intron CG32791 - chrX_8_3535001 chrX_3535001 RAL-109_125b 3881 chrX 3535385 3535425 chrX 3535510 3535566 15 135 7.5 8.0 7.8 1.7 181 chrX 3535385 intron CG32791 - chrX 3535476 intron CG32791 - chrX 3535566 intron CG32791 - chrX_15_3535001 chrX_3535001 RAL-109_125b 3882 chrX 3582676 3582718 chrX 3582809 3582851 11 129 5.0 5.5 5.2 1.8 175 chrX 3582676 intron AstA-R1 + chrX 3582764 intron AstA-R1 + chrX 3582851 intron AstA-R1 + chrX_11_3580001 chrX_3580001 RAL-109_125b 3883 chrX 3589451 3589514 chrX 3589586 3589607 10 121 2.5 11.0 6.8 1.3 156 chrX 3589451 intron AstA-R1 + chrX 3589529 intron AstA-R1 + chrX 3589607 intron AstA-R1 + chrX_10_3585001 chrX_3585001 RAL-109_125b 3884 chrX 3589968 3590009 chrX 3590145 3590146 12 167 7.0 8.5 7.8 1.4 178 chrX 3589968 intron AstA-R1 + chrX 3590057 intron AstA-R1 + chrX 3590146 intron AstA-R1 + chrX_12_3590001 chrX_3590001 RAL-109_125b 3885 chrX 3597059 3597125 chrX 3597197 3597263 17 134 0.0 4.0 2.0 5.7 204 chrX 3597059 intron AstA-R1 + chrX 3597161 intron AstA-R1 + chrX 3597263 intron AstA-R1 + chrX_17_3595001 chrX_3595001 RAL-109_125b 3886 chrX 3597523 3597580 chrX 3619741 3619800 roo 19 22215 9.0 8.5 8.8 1.9 22277 chrX 3597523 intron AstA-R1 + chrX 3608662 intron AstA-R1 + chrX 3619800 intron AstA-R1 + chrX_19_3605001 chrX_3605001 RAL-109_125b 3887 chrX 3630501 3630572 chrX 3630626 3630698 26 123 4.0 1.5 2.8 6.8 197 chrX 3630501 intron AstA-R1 + chrX 3630600 intron AstA-R1 + chrX 3630698 intron AstA-R1 + chrX_26_3630001 chrX_3630001 RAL-109_125b 3888 chrX 3713072 3713129 chrX 3713215 3713288 31 158 4.0 1.5 2.8 8.2 216 chrX 3713072 intron Rala - chrX 3713180 intron Rala - chrX 3713288 intron Rala - chrX_31_3710001 chrX_3710001 RAL-109_125b 3889 chrX 3726727 3726743 chrX 3730174 3730190 NOF 5 3447 8.0 15.0 11.5 0.4 3463 chrX 3726727 intron tlk + chrX 3728458 intron tlk + chrX 3730190 intron tlk + chrX_5_3725001 chrX_3725001 RAL-109_125b 3890 chrX 3726744 3726784 chrX 3730170 3730231 NOF 9 3444 8.0 14.5 11.2 0.7 3487 chrX 3726744 intron tlk + chrX 3728488 intron tlk + chrX 3730231 intron tlk + chrX_9_3725001 chrX_3725001 RAL-109_125b 3891 chrX 3768233 3768282 chrX 3768359 3768390 4 112 7.0 7.0 7.0 0.5 157 chrX 3768233 intron tlk + chrX 3768312 intron tlk + chrX 3768390 intron tlk + chrX_4_3765001 chrX_3765001 RAL-109_125b 3892 chrX 3842302 3842349 chrX 3842570 3842617 pogo 21 264 3.0 5.0 4.0 4.2 315 chrX 3842302 intron ec + chrX 3842460 intron ec + chrX 3842617 intron ec + chrX_21_3840001 chrX_3840001 RAL-109_125b 3893 chrX 3890615 3890682 chrX 3890990 3891057 13 369 5.5 10.0 7.8 1.5 442 chrX 3890615 intergenic CG15239 + chrX 3890836 intergenic CG15239 + chrX 3891057 intergenic CG42541 - chrX_13_3890001 chrX_3890001 RAL-109_125b 3894 chrX 3899579 3899622 chrX 3899706 3899749 16 124 15.5 12.5 14.0 1.1 170 chrX 3899579 intron CG42541 - chrX 3899664 intron CG42541 - chrX 3899749 intron CG42541 - chrX_16_3895001 chrX_3895001 RAL-109_125b 3895 chrX 3922086 3922101 chrX 3922407 3922422 4 318 16.5 8.0 12.2 0.3 336 chrX 3922086 intron CG42541 - chrX 3922254 intron CG42541 - chrX 3922422 intron CG42541 - chrX_4_3920001 chrX_3920001 RAL-109_125b 3896 chrX 3922132 3922155 chrX 3922406 3922469 8 310 6.0 8.0 7.0 1.0 337 chrX 3922132 intron CG42541 - chrX 3922300 intron CG42541 - chrX 3922469 intron CG42541 - chrX_8_3920001 chrX_3920001 RAL-109_125b 3897 chrX 3986832 3986848 chrX 3994515 3994531 412 5 7683 9.0 7.5 8.2 0.5 7699 chrX 3986832 intergenic not near genes chrX 3990682 intergenic not near genes chrX 3994531 intergenic not near genes chrX_5_3990001 chrX_3990001 RAL-109_125b 3898 chrX 3986850 3986888 chrX 3994502 3994571 412 12 7680 4.5 5.5 5.0 2.0 7721 chrX 3986850 intergenic not near genes chrX 3990710 intergenic not near genes chrX 3994571 intergenic not near genes chrX_12_3990001 chrX_3990001 RAL-109_125b 3899 chrX 4029494 4029554 chrX 4029734 4029794 12 236 2.5 7.0 4.8 2.1 300 chrX 4029494 intergenic not near genes chrX 4029644 intergenic not near genes chrX 4029794 intergenic not near genes chrX_12_4025001 chrX_4025001 RAL-109_125b 3900 chrX 4039029 4039077 chrX 4039156 4039166 7 113 13.0 8.0 10.5 0.6 137 chrX 4039029 intergenic not near genes chrX 4039098 intergenic not near genes chrX 4039166 intergenic not near genes chrX_7_4035001 chrX_4035001 RAL-109_125b 3901 chrX 4048454 4048523 chrX 4048580 4048638 24 125 6.0 7.0 6.5 3.2 184 chrX 4048454 3` UTR CR45482 - chrX 4048546 3` UTR CR45482 - chrX 4048638 3` UTR CR45482 - chrX_24_4045001 chrX_4045001 RAL-109_125b 3902 chrX 4055627 4055658 chrX 4055741 4055790 11 129 7.0 7.5 7.2 1.3 163 chrX 4055627 intergenic not near genes chrX 4055708 intergenic not near genes chrX 4055790 intergenic not near genes chrX_11_4055001 chrX_4055001 RAL-109_125b 3903 chrX 4132626 4132700 chrX 4132844 4132873 13 209 5.5 10.0 7.8 1.5 247 chrX 4132626 3` UTR GlcAT-I + chrX 4132750 3` UTR GlcAT-I + chrX 4132873 intergenic Fas2 -,GlcAT-I + chrX_13_4130001 chrX_4130001 RAL-109_125b 3904 chrX 4157853 4157922 chrX 4164956 4165025 297 23 7101 4.0 6.5 5.2 3.7 7172 chrX 4157853 intron Fas2 - chrX 4161439 intron Fas2 - chrX 4165025 intron Fas2 - chrX_23_4160001 chrX_4160001 RAL-109_125b 3905 chrX 4209901 4209918 chrX 4210021 4210057 6 136 0.0 6.0 3.0 1.5 156 chrX 4209901 intergenic not near genes chrX 4209979 intergenic not near genes chrX 4210057 intergenic not near genes chrX_6_4205001 chrX_4205001 RAL-109_125b 3906 chrX 4216298 4216319 chrX 4216427 4216448 5 129 12.0 12.5 12.2 0.4 150 chrX 4216298 intergenic not near genes chrX 4216373 intergenic CG15571 - chrX 4216448 intergenic CG15571 - chrX_5_4215001 chrX_4215001 RAL-109_125b 3907 chrX 4240131 4240201 chrX 4240308 4240364 35 174 6.0 7.0 6.5 4.7 233 chrX 4240131 intergenic not near genes chrX 4240248 intergenic not near genes chrX 4240364 intergenic not near genes chrX_35_4240001 chrX_4240001 RAL-109_125b 3908 chrX 4302029 4302074 chrX 4302164 4302209 6 135 9.0 5.0 7.0 0.8 180 chrX 4302029 exon CG12692 - chrX 4302119 intron CG12692 - chrX 4302209 intron CG12692 - chrX_6_4300001 chrX_4300001 RAL-109_125b 3909 chrX 4389377 4389380 chrX 12946233 12946233 6 8556856 29.0 27.0 28.0 0.2 8556856 chrX 4389377 intron CR32773 - chrX 8667805 intergenic not near genes chrX 12946233 3` UTR fne + chrX_6_8665001 chrX_8665001 RAL-109_125b 3910 chrX 4396927 4397002 chrX 4397062 4397137 18 133 3.0 5.0 4.0 3.6 210 chrX 4396927 intron CR32773 - chrX 4397032 intron CR32773 - chrX 4397137 intron CR32773 - chrX_18_4395001 chrX_4395001 RAL-109_125b 3911 chrX 4436476 4436485 chrX 4436595 4436616 6 129 3.5 9.0 6.2 0.8 140 chrX 4436476 intron,intron CR32773 -,bi + chrX 4436546 intron,intron CR32773 -,bi + chrX 4436616 intron,intron CR32773 -,bi + chrX_6_4435001 chrX_4435001 RAL-109_125b 3912 chrX 4455387 4455451 chrX 4455519 4455583 20 131 8.0 1.5 4.8 3.4 196 chrX 4455387 intron,intron CR32773 -,bi + chrX 4455485 intron,intron CR32773 -,bi + chrX 4455583 intron,intron CR32773 -,bi + chrX_20_4455001 chrX_4455001 RAL-109_125b 3913 chrX 4598127 4598164 chrX 4598257 4598289 5 128 0.0 0.0 0.0 5.0 162 chrX 4598127 intron CR32773 - chrX 4598208 intron CR32773 - chrX 4598289 intron CR32773 - chrX_5_4595001 chrX_4595001 RAL-109_125b 3914 chrX 4676829 4676850 chrX 4683944 4683959 6 7110 36.5 33.5 35.0 0.2 7130 chrX 4676829 intron rap - chrX 4680394 3` UTR Pp2C1 - chrX 4683959 intron Pp2C1 - chrX_6_4680001 chrX_4680001 RAL-109_125b 3915 chrX 4676828 4676865 chrX 4683978 4683999 8 7126 38.5 23.5 31.0 0.2 7171 chrX 4676828 intron rap - chrX 4680414 3` UTR Pp2C1 - chrX 4683999 intron Pp2C1 - chrX_8_4680001 chrX_4680001 RAL-109_125b 3916 chrX 4693762 4693765 chrX 4693867 4693895 5 133 0.5 7.0 3.8 1.0 133 chrX 4693762 intron ctp + chrX 4693828 intron ctp + chrX 4693895 intron ctp + chrX_5_4690001 chrX_4690001 RAL-109_125b 3917 chrX 4693766 4693778 chrX 4693848 4693923 8 134 0.5 5.0 2.8 2.1 157 chrX 4693766 intron ctp + chrX 4693844 intron ctp + chrX 4693923 intron ctp + chrX_8_4690001 chrX_4690001 RAL-109_125b 3918 chrX 4700348 4700419 chrX 4700741 4700812 jockey 30 391 6.5 4.0 5.2 4.8 464 chrX 4700348 3` UTR ctp + chrX 4700580 3` UTR ctp + chrX 4700812 3` UTR ctp + chrX_30_4700001 chrX_4700001 RAL-109_125b 3919 chrX 4717318 4717380 chrX 4717874 4717951 19 564 3.5 4.5 4.0 3.8 633 chrX 4717318 intron Proc-R + chrX 4717634 intron Proc-R + chrX 4717951 intron Proc-R + chrX_19_4715001 chrX_4715001 RAL-109_125b 3920 chrX 4731771 4731813 chrX 4736914 4736921 jockey 8 5136 10.0 5.5 7.8 0.9 5150 chrX 4731771 intergenic not near genes chrX 4734346 intergenic not near genes chrX 4736921 intergenic not near genes chrX_8_4730001 chrX_4730001 RAL-109_125b 3921 chrX 4757361 4757395 chrX 4757490 4757524 9 127 0.5 7.5 4.0 1.8 163 chrX 4757361 intergenic not near genes chrX 4757442 intergenic not near genes chrX 4757524 intergenic not near genes chrX_9_4755001 chrX_4755001 RAL-109_125b 3922 chrX 4759344 4759401 chrX 4759470 4759527 14 122 9.0 9.0 9.0 1.4 183 chrX 4759344 intergenic not near genes chrX 4759436 intergenic not near genes chrX 4759527 intergenic not near genes chrX_14_4755001 chrX_4755001 RAL-109_125b 3923 chrX 4763219 4763267 chrX 4763756 4763804 Stalker4 12 535 8.0 9.5 8.8 1.2 585 chrX 4763219 intergenic not near genes chrX 4763512 intergenic not near genes chrX 4763804 intergenic not near genes chrX_12_4760001 chrX_4760001 RAL-109_125b 3924 chrX 4792342 4792395 chrX 4792825 4792878 jockey 11 483 7.0 10.5 8.8 1.1 536 chrX 4792342 intergenic not near genes chrX 4792610 intergenic not near genes chrX 4792878 intergenic not near genes chrX_11_4790001 chrX_4790001 RAL-109_125b 3925 chrX 4827941 4827971 chrX 4835350 4835356 Stalker4 8 7407 10.0 5.0 7.5 0.9 7415 chrX 4827941 intergenic not near genes chrX 4831648 intergenic not near genes chrX 4835356 intergenic not near genes chrX_8_4830001 chrX_4830001 RAL-109_125b 3926 chrX 4827977 4827995 chrX 4835340 4835416 Stalker4 11 7402 7.0 5.0 6.0 1.6 7439 chrX 4827977 intergenic not near genes chrX 4831696 intergenic not near genes chrX 4835416 intergenic not near genes chrX_11_4830001 chrX_4830001 RAL-109_125b 3927 chrX 4856093 4856143 chrX 4856221 4856271 13 120 6.5 9.5 8.0 1.4 178 chrX 4856093 intron CG42594 + chrX 4856182 intron CG42594 + chrX 4856271 intron CG42594 + chrX_13_4855001 chrX_4855001 RAL-109_125b 3928 chrX 4864130 4864135 chrX 4864253 4864263 5 126 17.5 15.5 16.5 0.3 133 chrX 4864130 intron CG42594 + chrX 4864196 intron CG42594 + chrX 4864263 intron CG42594 + chrX_5_4860001 chrX_4860001 RAL-109_125b 3929 chrX 4864139 4864167 chrX 4864249 4864288 8 123 14.0 15.5 14.8 0.5 149 chrX 4864139 intron CG42594 + chrX 4864214 intron CG42594 + chrX 4864288 intron CG42594 + chrX_8_4860001 chrX_4860001 RAL-109_125b 3930 chrX 4931304 4931367 chrX 4931448 4931511 33 142 42.0 34.0 38.0 0.8 207 chrX 4931304 intron CG44774 - chrX 4931408 intron CG44774 - chrX 4931511 intron CG44774 - chrX_33_4930001 chrX_4930001 RAL-109_125b 3931 chrX 4931368 4931376 chrX 4931442 4931483 6 126 40.0 32.5 36.2 0.2 115 chrX 4931368 intron CG44774 - chrX 4931426 intron CG44774 - chrX 4931483 intron CG44774 - chrX_6_4930001 chrX_4930001 RAL-109_125b 3932 chrX 4963083 4963105 chrX 4963216 4963217 6 130 3.0 5.0 4.0 1.2 134 chrX 4963083 intron CR44833 - chrX 4963150 intron CR44833 - chrX 4963217 intron CR44833 - chrX_6_4960001 chrX_4960001 RAL-109_125b 3933 chrX 4990001 4990077 chrX 4997265 4997294 roo 29 7260 3.0 8.5 5.8 4.3 7293 chrX 4990001 intron CR44833 - chrX 4993648 intron CR44833 - chrX 4997294 intron CR44833 - chrX_29_4990001 chrX_4990001 RAL-109_125b 3934 chrX 5096245 5096291 chrX 5103846 5103906 springer 17 7609 11.0 7.5 9.2 1.7 7661 chrX 5096245 intron,intron CG15465 +,rg + chrX 5100076 intron,intron CG15465 +,rg + chrX 5103906 intron,intron CG15465 +,rg + chrX_17_5100001 chrX_5100001 RAL-109_125b 3935 chrX 5105407 5105435 chrX 5105564 5105592 5 157 11.5 6.0 8.8 0.5 185 chrX 5105407 intron,intron CG15465 +,rg + chrX 5105500 intron,intron CG15465 +,rg + chrX 5105592 intron,intron CG15465 +,rg + chrX_5_5105001 chrX_5105001 RAL-109_125b 3936 chrX 5118315 5118346 chrX 5118684 5118731 12 380 4.5 6.5 5.5 1.8 416 chrX 5118315 intron,intron CG15465 +,rg + chrX 5118523 intron,intron CG15465 +,rg + chrX 5118731 intron,intron CG15465 +,rg + chrX_12_5115001 chrX_5115001 RAL-109_125b 3937 chrX 5131364 5131425 chrX 5131478 5131533 19 123 6.5 9.5 8.0 2.1 169 chrX 5131364 intron,intron CG15465 +,rg + chrX 5131448 intron,intron CG15465 +,rg + chrX 5131533 intron,intron CG15465 +,rg + chrX_19_5130001 chrX_5130001 RAL-109_125b 3938 chrX 5151757 5151812 chrX 5151890 5151945 9 133 6.0 3.0 4.5 1.6 188 chrX 5151757 intron,intron CG15465 +,rg + chrX 5151851 intron,intron CG15465 +,rg + chrX 5151945 intron,intron CG15465 +,rg + chrX_9_5150001 chrX_5150001 RAL-109_125b 3939 chrX 5220339 5220365 chrX 5220630 5220655 11 291 17.0 6.5 11.8 0.9 316 chrX 5220339 intron,intron CG15465 +,rg + chrX 5220497 intron,intron CG15465 +,rg + chrX 5220655 intron,intron CG15465 +,rg + chrX_11_5220001 chrX_5220001 RAL-109_125b 3940 chrX 5272778 5272851 chrX 5272915 5272987 12 132 3.5 3.0 3.2 2.9 209 chrX 5272778 intergenic not near genes chrX 5272882 intergenic not near genes chrX 5272987 intergenic not near genes chrX_12_5270001 chrX_5270001 RAL-109_125b 3941 chrX 5291461 5291468 chrX 5291593 5291601 4 131 19.5 6.5 13.0 0.3 140 chrX 5291461 intergenic not near genes chrX 5291531 intergenic not near genes chrX 5291601 intergenic not near genes chrX_4_5290001 chrX_5290001 RAL-109_125b 3942 chrX 5291469 5291727 chrX 5291591 5291853 11 126 10.5 6.0 8.2 1.2 384 chrX 5291469 intergenic not near genes chrX 5291661 intergenic not near genes chrX 5291853 intergenic not near genes chrX_11_5290001 chrX_5290001 RAL-109_125b 3943 chrX 5338665 5338684 chrX 5339967 5339987 jockey 7 1303 14.0 2.0 8.0 0.8 1322 chrX 5338665 intergenic not near genes chrX 5339326 intergenic not near genes chrX 5339987 intergenic SK + chrX_7_5335001 chrX_5335001 RAL-109_125b 3944 chrX 5338691 5338736 chrX 5339964 5339979 jockey 6 1272 7.0 2.0 4.5 1.1 1288 chrX 5338691 intergenic not near genes chrX 5339335 intergenic not near genes chrX 5339979 intergenic SK + chrX_6_5335001 chrX_5335001 RAL-109_125b 3945 chrX 5350255 5350315 chrX 5350413 5350469 20 155 8.0 10.0 9.0 2.0 214 chrX 5350255 intron SK + chrX 5350362 intron SK + chrX 5350469 intron SK + chrX_20_5350001 chrX_5350001 RAL-109_125b 3946 chrX 5386573 5386636 chrX 5386703 5386766 18 129 7.5 7.0 7.2 2.2 193 chrX 5386573 intron SK + chrX 5386670 intron SK + chrX 5386766 intron SK + chrX_18_5385001 chrX_5385001 RAL-109_125b 3947 chrX 5473541 5473615 chrX 5473665 5473711 23 120 2.5 2.5 2.5 6.6 170 chrX 5473541 intron SPR + chrX 5473626 intron SPR + chrX 5473711 intron SPR + chrX_23_5470001 chrX_5470001 RAL-109_125b 3948 chrX 5480487 5480550 chrX 5480615 5480678 20 128 7.5 11.5 9.5 1.9 191 chrX 5480487 intron SPR + chrX 5480582 intron SPR + chrX 5480678 intron SPR + chrX_20_5480001 chrX_5480001 RAL-109_125b 3949 chrX 5501439 5501509 chrX 5501579 5501649 21 140 5.0 0.5 2.8 5.5 210 chrX 5501439 intergenic CG4151 +,CG32762 - chrX 5501544 5` UTR CG4151 + chrX 5501649 5` UTR CG4151 + chrX_21_5500001 chrX_5500001 RAL-109_125b 3950 chrX 5524803 5524844 chrX 5528716 5528725 412 8 3906 10.5 4.5 7.5 0.9 3922 chrX 5524803 intergenic snoRNA:Psi28S-3342 - chrX 5526764 intergenic not near genes chrX 5528725 intergenic Vsx2 - chrX_8_5525001 chrX_5525001 RAL-109_125b 3951 chrX 5727376 5727416 chrX 5732165 5732205 Doc 17 4789 4.5 9.5 7.0 2.1 4829 chrX 5727376 intron CG32758 - chrX 5729790 intron CG32758 - chrX 5732205 intron CG32758 - chrX_17_5725001 chrX_5725001 RAL-109_125b 3952 chrX 5798856 5798884 chrX 5799032 5799096 11 207 0.0 6.5 3.2 2.6 240 chrX 5798856 intergenic not near genes chrX 5798976 intergenic not near genes chrX 5799096 intergenic not near genes chrX_11_5795001 chrX_5795001 RAL-109_125b 3953 chrX 5883767 5883840 chrX 5884058 5884121 pogo 24 288 4.0 8.0 6.0 3.4 354 chrX 5883767 intron CR45668 - chrX 5883944 intron CR45668 - chrX 5884121 intron CR45668 - chrX_24_5880001 chrX_5880001 RAL-109_125b 3954 chrX 5884118 5884183 chrX 5884409 5884466 pogo 20 291 8.0 8.0 8.0 2.2 348 chrX 5884118 intron CR45668 - chrX 5884292 intron CR45668 - chrX 5884466 intron CR45668 - chrX_20_5880001 chrX_5880001 RAL-109_125b 3955 chrX 6003268 6003271 chrX 6003399 6003402 5 131 8.0 12.0 10.0 0.5 134 chrX 6003268 intron CR44498 + chrX 6003335 intron CR44498 + chrX 6003402 intron CR44498 + chrX_5_6000001 chrX_6000001 RAL-109_125b 3956 chrX 6003273 6003281 chrX 6003398 6003412 4 130 7.5 12.0 9.8 0.4 139 chrX 6003273 intron CR44498 + chrX 6003342 intron CR44498 + chrX 6003412 intron CR44498 + chrX_4_6000001 chrX_6000001 RAL-109_125b 3957 chrX 6003285 6003308 chrX 6003371 6003439 14 126 4.5 7.5 6.0 2.0 154 chrX 6003285 intron CR44498 + chrX 6003362 intron CR44498 + chrX 6003439 intron CR44498 + chrX_14_6000001 chrX_6000001 RAL-109_125b 3958 chrX 6009210 6009272 chrX 6009600 6009662 23 389 7.5 9.0 8.2 2.5 452 chrX 6009210 intron mab-21 - chrX 6009436 intron mab-21 - chrX 6009662 intron mab-21 - chrX_23_6005001 chrX_6005001 RAL-109_125b 3959 chrX 6080784 6080825 chrX 6080918 6080959 15 132 8.0 8.5 8.2 1.6 175 chrX 6080784 intron CG4660 - chrX 6080872 intron CG4660 - chrX 6080959 intron CG4660 - chrX_15_6080001 chrX_6080001 RAL-109_125b 3960 chrX 6171559 6171602 chrX 6179030 6179068 Quasimodo 18 7476 9.5 6.0 7.8 2.0 7509 chrX 6171559 intron Ca-alpha1T - chrX 6175314 intron Ca-alpha1T - chrX 6179068 intron Ca-alpha1T - chrX_18_6175001 chrX_6175001 RAL-109_125b 3961 chrX 6215482 6215530 chrX 6215613 6215646 16 124 10.5 5.0 7.8 1.8 164 chrX 6215482 intergenic not near genes chrX 6215564 intergenic not near genes chrX 6215646 intergenic not near genes chrX_16_6215001 chrX_6215001 RAL-109_125b 3962 chrX 6320023 6320042 chrX 6320181 6320200 7 158 13.5 10.0 11.8 0.5 177 chrX 6320023 intron CG15894 + chrX 6320112 intron CG15894 + chrX 6320200 intron CG15894 + chrX_7_6320001 chrX_6320001 RAL-109_125b 3963 chrX 6320046 6320074 chrX 6320174 6320232 20 154 9.5 9.0 9.2 2.0 186 chrX 6320046 intron CG15894 + chrX 6320139 intron CG15894 + chrX 6320232 intron CG15894 + chrX_20_6320001 chrX_6320001 RAL-109_125b 3964 chrX 6335213 6335233 chrX 6337758 6337793 Tirant 4 2556 0.5 15.5 8.0 0.4 2580 chrX 6335213 intergenic not near genes chrX 6336503 intergenic not near genes chrX 6337793 5` UTR CG3842 + chrX_4_6335001 chrX_6335001 RAL-109_125b 3965 chrX 6335234 6335236 chrX 6337757 6337796 Tirant 4 2547 0.0 15.5 7.8 0.5 2562 chrX 6335234 intergenic not near genes chrX 6336515 intergenic not near genes chrX 6337796 5` UTR CG3842 + chrX_4_6335001 chrX_6335001 RAL-109_125b 3966 chrX 6388615 6388691 chrX 6388741 6388817 27 126 5.5 5.0 5.2 4.4 202 chrX 6388615 intergenic not near genes chrX 6388716 intergenic not near genes chrX 6388817 intergenic not near genes chrX_27_6385001 chrX_6385001 RAL-109_125b 3967 chrX 6392827 6392894 chrX 6397641 6397709 Doc 28 4812 8.0 8.0 8.0 3.1 4882 chrX 6392827 intergenic not near genes chrX 6395268 intergenic not near genes chrX 6397709 intergenic not near genes chrX_28_6395001 chrX_6395001 RAL-109_125b 3968 chrX 6412944 6412996 chrX 6413053 6413120 5 114 6.5 2.5 4.5 0.9 176 chrX 6412944 intergenic not near genes chrX 6413032 intergenic not near genes chrX 6413120 intergenic not near genes chrX_5_6410001 chrX_6410001 RAL-109_125b 3969 chrX 6445262 6445322 chrX 6451070 6451130 297 4 5808 5.0 3.0 4.0 0.8 5868 chrX 6445262 intron CG42340 - chrX 6448196 intron CG42340 - chrX 6451130 intron CG42340 - chrX_4_6445001 chrX_6445001 RAL-109_125b 3970 chrX 6487939 6487981 chrX 6488065 6488111 7 130 11.5 11.5 11.5 0.6 172 chrX 6487939 intron CG42340 - chrX 6488025 intron CG42340 - chrX 6488111 intron CG42340 - chrX_7_6485001 chrX_6485001 RAL-109_125b 3971 chrX 6562775 6562848 chrX 6571308 6571356 Tirant 16 8528 4.0 5.0 4.5 2.9 8581 chrX 6562775 intron CG34417 + chrX 6567066 intron CG34417 + chrX 6571356 intron CG34417 + chrX_16_6565001 chrX_6565001 RAL-109_125b 3972 chrX 6591807 6591840 chrX 6591942 6591974 14 135 7.0 0.0 3.5 3.1 167 chrX 6591807 intron Pat1 + chrX 6591890 intron Pat1 + chrX 6591974 intron Pat1 + chrX_14_6590001 chrX_6590001 RAL-109_125b 3973 chrX 6605438 6605502 chrX 6608510 6608574 Burdock 15 3072 7.5 5.5 6.5 2.0 3136 chrX 6605438 intron pigs + chrX 6607006 intron pigs + chrX 6608574 intron pigs + chrX_15_6605001 chrX_6605001 RAL-109_125b 3974 chrX 6629748 6629768 chrX 6629885 6629905 8 137 10.5 7.5 9.0 0.8 157 chrX 6629748 intron pigs + chrX 6629826 intron pigs + chrX 6629905 intron pigs + chrX_8_6625001 chrX_6625001 RAL-109_125b 3975 chrX 6629769 6629794 chrX 6629879 6629931 14 135 5.5 6.5 6.0 2.0 162 chrX 6629769 intron pigs + chrX 6629850 intron pigs + chrX 6629931 intron pigs + chrX_14_6625001 chrX_6625001 RAL-109_125b 3976 chrX 6652986 6653028 chrX 6653111 6653154 5 126 5.5 10.5 8.0 0.6 168 chrX 6652986 3` UTR pigs + chrX 6653070 intergenic CG3226 -,pigs + chrX 6653154 3` UTR CG3226 - chrX_5_6650001 chrX_6650001 RAL-109_125b 3977 chrX 6733436 6733670 chrX 6733569 6733792 9 130 7.5 20.0 13.8 0.6 356 chrX 6733436 intron,intron CG3168 -,CR43461 + chrX 6733614 intron,intron CG3168 -,CR43461 + chrX 6733792 intron,intron CG3168 -,CR43461 + chrX_9_6730001 chrX_6730001 RAL-109_125b 3978 chrX 6896188 6896227 chrX 6896299 6896353 13 118 5.5 0.5 3.0 3.2 165 chrX 6896188 intergenic not near genes chrX 6896270 intergenic not near genes chrX 6896353 intergenic not near genes chrX_13_6895001 chrX_6895001 RAL-109_125b 3979 chrX 6897585 6897711 chrX 6897683 6897871 35 157 0.0 0.0 0.0 35.0 286 chrX 6897585 intergenic not near genes chrX 6897728 intergenic not near genes chrX 6897871 intergenic not near genes chrX_35_6895001 chrX_6895001 RAL-109_125b 3980 chrX 6901334 6901384 chrX 6901460 6901510 16 124 6.5 8.5 7.5 1.9 176 chrX 6901334 intergenic not near genes chrX 6901422 intergenic not near genes chrX 6901510 intergenic not near genes chrX_16_6900001 chrX_6900001 RAL-109_125b 3981 chrX 6961646 6961712 chrX 6961773 6961839 8 123 0.0 7.5 3.8 1.7 193 chrX 6961646 intron,intron CG14431 +,CG32732 - chrX 6961742 intron,intron CG14431 +,CG32732 - chrX 6961839 intron,intron CG14431 +,CG32732 - chrX_8_6960001 chrX_6960001 RAL-109_125b 3982 chrX 6969897 6969926 chrX 6970041 6970067 5 135 39.5 38.0 38.8 0.1 170 chrX 6969897 intergenic CG4586 + chrX 6969982 5` UTR CG4586 + chrX 6970067 exon CG4586 + chrX_5_6965001 chrX_6965001 RAL-109_125b 3983 chrX 6989482 6989504 chrX 6989619 6989641 9 135 13.5 13.5 13.5 0.6 159 chrX 6989482 intron ogre - chrX 6989562 intron ogre - chrX 6989641 intron ogre - chrX_9_6985001 chrX_6985001 RAL-109_125b 3984 chrX 6989505 6989527 chrX 6989607 6989664 13 130 9.0 10.0 9.5 1.2 159 chrX 6989505 intron ogre - chrX 6989584 intron ogre - chrX 6989664 intron ogre - chrX_13_6985001 chrX_6985001 RAL-109_125b 3985 chrX 7023558 7023625 chrX 7030998 7031023 Tabor 18 7434 5.5 6.0 5.8 2.6 7465 chrX 7023558 intron CG12541 - chrX 7027290 intron CG12541 - chrX 7031023 intron CG12541 - chrX_18_7025001 chrX_7025001 RAL-109_125b 3986 chrX 7048869 7048954 chrX 7049017 7049047 11 139 0.5 3.5 2.0 3.7 178 chrX 7048869 intron CG12541 - chrX 7048958 intron CG12541 - chrX 7049047 intron CG12541 - chrX_11_7045001 chrX_7045001 RAL-109_125b 3987 chrX 7072800 7072863 chrX 7073392 7073460 29 593 6.5 4.0 5.2 4.7 660 chrX 7072800 intergenic CG4607 + chrX 7073130 intergenic CG4607 + chrX 7073460 intergenic not near genes chrX_29_7070001 chrX_7070001 RAL-109_125b 3988 chrX 7125230 7125265 chrX 7134439 7134474 roo 16 9209 0.0 11.5 5.8 2.4 9244 chrX 7125230 intergenic not near genes chrX 7129852 intergenic not near genes chrX 7134474 intergenic not near genes chrX_16_7125001 chrX_7125001 RAL-109_125b 3989 chrX 7235513 7235543 chrX 7235650 7235680 6 137 5.5 7.0 6.2 0.8 167 chrX 7235513 intron,intron CG9650 +,CR44357 - chrX 7235596 intron,intron CG9650 +,CR44357 - chrX 7235680 intron,intron CG9650 +,CR44357 - chrX_6_7235001 chrX_7235001 RAL-109_125b 3990 chrX 7488418 7488451 chrX 7488517 7488584 6 127 5.0 6.5 5.8 0.9 166 chrX 7488418 intergenic CR45534 + chrX 7488501 intergenic CR45534 +,CG43278 - chrX 7488584 intergenic CR45534 +,CG43278 - chrX_6_7485001 chrX_7485001 RAL-109_125b 3991 chrX 7602767 7602841 chrX 7602987 7603021 12 215 7.5 4.0 5.8 1.8 254 chrX 7602767 intergenic not near genes chrX 7602894 intergenic not near genes chrX 7603021 intergenic not near genes chrX_12_7600001 chrX_7600001 RAL-109_125b 3992 chrX 7702873 7702883 chrX 7703355 7703372 jockey 4 484 20.5 7.0 13.8 0.3 499 chrX 7702873 intron CHES-1-like - chrX 7703122 intron CHES-1-like - chrX 7703372 intron CHES-1-like - chrX_4_7700001 chrX_7700001 RAL-109_125b 3993 chrX 7702884 7702920 chrX 7703347 7703409 jockey 23 486 13.5 6.0 9.8 2.1 525 chrX 7702884 intron CHES-1-like - chrX 7703146 intron CHES-1-like - chrX 7703409 intron CHES-1-like - chrX_23_7700001 chrX_7700001 RAL-109_125b 3994 chrX 7832391 7832461 chrX 7832530 7832600 26 138 5.0 5.5 5.2 4.2 209 chrX 7832391 intron CG1402 + chrX 7832496 intron CG1402 + chrX 7832600 intron CG1402 + chrX_26_7830001 chrX_7830001 RAL-109_125b 3995 chrX 7845691 7845751 chrX 7847216 7847292 hopper2 11 1537 8.0 5.0 6.5 1.5 1601 chrX 7845691 intergenic not near genes chrX 7846492 intergenic not near genes chrX 7847292 intergenic not near genes chrX_11_7845001 chrX_7845001 RAL-109_125b 3996 chrX 8031391 8031450 chrX 8035750 8035809 Juan 26 4357 8.0 9.5 8.8 2.7 4418 chrX 8031391 intergenic not near genes chrX 8033600 intergenic not near genes chrX 8035809 3` UTR CG2233 - chrX_26_8030001 chrX_8030001 RAL-109_125b 3997 chrX 8066532 8066600 chrX 8066658 8066739 16 138 0.0 4.0 2.0 5.3 207 chrX 8066532 intron mys + chrX 8066636 intron mys + chrX 8066739 intron mys + chrX_16_8065001 chrX_8065001 RAL-109_125b 3998 chrX 8075097 8075111 chrX 8075256 8075270 4 158 18.0 9.0 13.5 0.3 173 chrX 8075097 exon Upf2 - chrX 8075184 5` UTR Upf2 - chrX 8075270 5` UTR Upf2 - chrX_4_8075001 chrX_8075001 RAL-109_125b 3999 chrX 8075112 8075121 chrX 8075253 8075253 5 146 16.0 8.5 12.2 0.4 141 chrX 8075112 exon Upf2 - chrX 8075182 5` UTR Upf2 - chrX 8075253 5` UTR Upf2 - chrX_5_8075001 chrX_8075001 RAL-109_125b 4000 chrX 8075133 8075161 chrX 8075247 8075320 10 143 10.0 8.0 9.0 1.0 187 chrX 8075133 exon Upf2 - chrX 8075226 5` UTR Upf2 - chrX 8075320 5` UTR Upf2 - chrX_10_8075001 chrX_8075001 RAL-109_125b 4001 chrX 8083508 8083529 chrX 8083635 8083654 5 120 10.5 14.5 12.5 0.4 146 chrX 8083508 intergenic not near genes chrX 8083581 intergenic CG2256 - chrX 8083654 intergenic CG2256 - chrX_5_8080001 chrX_8080001 RAL-109_125b 4002 chrX 8327243 8327271 chrX 8327372 8327400 4 129 6.0 7.5 6.8 0.5 157 chrX 8327243 intron nAChRalpha3 - chrX 8327322 intron nAChRalpha3 - chrX 8327400 intron nAChRalpha3 - chrX_4_8325001 chrX_8325001 RAL-109_125b 4003 chrX 8364801 8364864 chrX 8365248 8365311 BS 16 446 3.5 5.5 4.5 2.9 510 chrX 8364801 intron nAChRalpha3 - chrX 8365056 intron nAChRalpha3 - chrX 8365311 intron nAChRalpha3 - chrX_16_8365001 chrX_8365001 RAL-109_125b 4004 chrX 8371104 8371181 chrX 8371316 8371377 7 199 4.0 2.5 3.2 1.7 273 chrX 8371104 intergenic not near genes chrX 8371240 intergenic not near genes chrX 8371377 intergenic not near genes chrX_7_8370001 chrX_8370001 RAL-109_125b 4005 chrX 8377866 8377893 chrX 8377993 8378014 12 126 9.5 5.0 7.2 1.5 148 chrX 8377866 intergenic not near genes chrX 8377940 intergenic not near genes chrX 8378014 intergenic not near genes chrX_12_8375001 chrX_8375001 RAL-109_125b 4006 chrX 8509068 8509150 chrX 8509195 8509277 26 127 2.5 4.5 3.5 5.8 209 chrX 8509068 intron CG33181 + chrX 8509172 intron CG33181 + chrX 8509277 intron CG33181 + chrX_26_8505001 chrX_8505001 RAL-109_125b 4007 chrX 8544105 8544160 chrX 8544234 8544289 11 129 2.0 4.5 3.2 2.6 184 chrX 8544105 intron Nrg + chrX 8544197 intron Nrg + chrX 8544289 intron Nrg + chrX_11_8540001 chrX_8540001 RAL-109_125b 4008 chrX 8571106 8571152 chrX 8575118 8575163 15 4011 43.5 52.0 47.8 0.3 4057 chrX 8571106 3` UTR spirit - chrX 8573134 intron spirit - chrX 8575163 intron CG12065 + chrX_15_8570001 chrX_8570001 RAL-109_125b 4009 chrX 8705636 8705671 chrX 8706137 8706173 5 502 4.5 3.0 3.8 1.0 537 chrX 8705636 intergenic not near genes chrX 8705904 intergenic not near genes chrX 8706173 intergenic not near genes chrX_5_8705001 chrX_8705001 RAL-109_125b 4010 chrX 8708689 8708767 chrX 8708823 8708900 37 139 44.5 40.5 42.5 0.9 211 chrX 8708689 intergenic not near genes chrX 8708794 intergenic not near genes chrX 8708900 intergenic not near genes chrX_37_8705001 chrX_8705001 RAL-109_125b 4011 chrX 8743224 8743238 chrX 8743352 8743366 4 128 7.5 9.0 8.2 0.4 142 chrX 8743224 intergenic not near genes chrX 8743295 intergenic not near genes chrX 8743366 intergenic not near genes chrX_4_8740001 chrX_8740001 RAL-109_125b 4012 chrX 8743243 8743260 chrX 8743350 8743388 8 123 4.5 8.0 6.2 1.1 145 chrX 8743243 intergenic not near genes chrX 8743316 intergenic not near genes chrX 8743388 intergenic not near genes chrX_8_8740001 chrX_8740001 RAL-109_125b 4013 chrX 8747967 8748026 chrX 8748099 8748147 14 124 9.5 9.5 9.5 1.3 180 chrX 8747967 intergenic not near genes chrX 8748057 intergenic not near genes chrX 8748147 intergenic not near genes chrX_14_8745001 chrX_8745001 RAL-109_125b 4014 chrX 8805477 8805547 chrX 8805613 8805683 20 131 2.5 3.0 2.8 5.3 206 chrX 8805477 5` UTR Lim1 - chrX 8805580 5` UTR Lim1 - chrX 8805683 5` UTR Lim1 - chrX_20_8805001 chrX_8805001 RAL-109_125b 4015 chrX 8842064 8842126 chrX 8842289 8842363 17 235 4.0 2.0 3.0 4.2 299 chrX 8842064 intron CG12075 + chrX 8842214 intron CG12075 + chrX 8842363 intron CG12075 + chrX_17_8840001 chrX_8840001 RAL-109_125b 4016 chrX 8877737 8877811 chrX 8877911 8877985 18 173 8.0 8.0 8.0 2.0 248 chrX 8877737 intron Moe - chrX 8877861 intron Moe - chrX 8877985 intron Moe - chrX_18_8875001 chrX_8875001 RAL-109_125b 4017 chrX 8908770 8908783 chrX 8908918 8908931 6 148 13.5 5.5 9.5 0.6 161 chrX 8908770 intron rdgA + chrX 8908850 intron rdgA + chrX 8908931 intron rdgA + chrX_6_8905001 chrX_8905001 RAL-109_125b 4018 chrX 8919441 8919498 chrX 8919749 8919775 6 293 5.0 8.0 6.5 0.8 334 chrX 8919441 intron rdgA + chrX 8919608 intron rdgA + chrX 8919775 intron,3` UTR rdgA +,CR44111 - chrX_6_8915001 chrX_8915001 RAL-109_125b 4019 chrX 8922290 8922332 chrX 8922774 8922816 jockey 17 482 12.5 8.5 10.5 1.5 526 chrX 8922290 intron rdgA + chrX 8922553 intron rdgA + chrX 8922816 intron rdgA + chrX_17_8920001 chrX_8920001 RAL-109_125b 4020 chrX 8927542 8927610 chrX 8929862 8929930 NOF 26 2319 7.0 4.5 5.8 3.8 2388 chrX 8927542 intron rdgA + chrX 8928736 intron rdgA + chrX 8929930 intron rdgA + chrX_26_8925001 chrX_8925001 RAL-109_125b 4021 chrX 8948712 8948790 chrX 8956272 8956300 roo 13 7552 4.0 6.0 5.0 2.2 7588 chrX 8948712 intron rdgA + chrX 8952506 intron rdgA + chrX 8956300 intron rdgA + chrX_13_8950001 chrX_8950001 RAL-109_125b 4022 chrX 8968840 8968853 chrX 8968950 8968980 4 115 14.5 17.0 15.8 0.2 140 chrX 8968840 intron rdgA + chrX 8968910 intron rdgA + chrX 8968980 intron rdgA + chrX_4_8965001 chrX_8965001 RAL-109_125b 4023 chrX 9062682 9062728 chrX 9062810 9062856 8 128 0.5 0.0 0.2 6.7 174 chrX 9062682 intron CG15365 - chrX 9062769 intron CG15365 - chrX 9062856 intron CG15365 - chrX_8_9060001 chrX_9060001 RAL-109_125b 4024 chrX 9212860 9212871 chrX 9212988 9212999 6 128 3.5 10.0 6.8 0.8 139 chrX 9212860 intergenic not near genes chrX 9212930 intergenic not near genes chrX 9212999 intergenic not near genes chrX_6_9210001 chrX_9210001 RAL-109_125b 4025 chrX 9218046 9218080 chrX 9218172 9218221 6 129 9.5 6.0 7.8 0.7 175 chrX 9218046 3` UTR t - chrX 9218134 3` UTR t - chrX 9218221 3` UTR t - chrX_6_9215001 chrX_9215001 RAL-109_125b 4026 chrX 9337910 9337927 chrX 9338037 9338052 5 134 11.5 7.5 9.5 0.5 142 chrX 9337910 intron CG34449 - chrX 9337981 intron CG34449 - chrX 9338052 exon CG34449 - chrX_5_9335001 chrX_9335001 RAL-109_125b 4027 chrX 9337934 9337967 chrX 9338033 9338093 13 136 6.0 7.5 6.8 1.7 159 chrX 9337934 intron CG34449 - chrX 9338014 intron CG34449 - chrX 9338093 exon CG34449 - chrX_13_9335001 chrX_9335001 RAL-109_125b 4028 chrX 9377788 9377862 chrX 9377917 9377985 22 126 6.5 8.5 7.5 2.6 197 chrX 9377788 intron mgl - chrX 9377886 intron mgl - chrX 9377985 intron mgl - chrX_22_9375001 chrX_9375001 RAL-109_125b 4029 chrX 9391534 9391601 chrX 9391730 9391797 18 196 4.0 5.0 4.5 3.3 263 chrX 9391534 intron mgl - chrX 9391666 intron mgl - chrX 9391797 intron mgl - chrX_18_9390001 chrX_9390001 RAL-109_125b 4030 chrX 9430190 9430217 chrX 9430637 9430665 7 445 9.0 6.5 7.8 0.8 475 chrX 9430190 intron mgl - chrX 9430428 intron mgl - chrX 9430665 intron mgl - chrX_7_9430001 chrX_9430001 RAL-109_125b 4031 chrX 9503211 9503211 chrX 22383084 22383376 11 12880053 18.0 168.0 93.0 0.1 12880165 chrX 9503211 3` UTR CG32700 - chrX 15943294 intron CG8924 + chrX 22383376 intergenic not near genes chrX_11_15940001 chrX_15940001 RAL-109_125b 4032 chrX 9527884 9527953 chrX 9528003 9528074 20 121 5.0 6.0 5.5 3.1 190 chrX 9527884 intron CG32700 - chrX 9527979 intron CG32700 - chrX 9528074 intron CG32700 - chrX_20_9525001 chrX_9525001 RAL-109_125b 4033 chrX 9543350 9543419 chrX 9543479 9543548 17 128 6.5 5.0 5.8 2.5 198 chrX 9543350 intron CG32700 - chrX 9543449 intron CG32700 - chrX 9543548 intron CG32700 - chrX_17_9540001 chrX_9540001 RAL-109_125b 4034 chrX 9575767 9575818 chrX 9576116 9576160 mdg3 17 363 6.0 10.0 8.0 1.9 393 chrX 9575767 intron,exon CG32699 -,CG42395 - chrX 9575964 intron,intron CG32699 -,CG42395 - chrX 9576160 intron,5` UTR CG32699 -,CG42395 - chrX_17_9575001 chrX_9575001 RAL-109_125b 4035 chrX 9576995 9577065 chrX 9577495 9577565 23 500 5.5 9.5 7.5 2.7 570 chrX 9576995 intron CG32699 - chrX 9577280 intron CG32699 - chrX 9577565 intron CG32699 - chrX_23_9575001 chrX_9575001 RAL-109_125b 4036 chrX 9732331 9732382 chrX 9732457 9732514 5 127 5.0 5.0 5.0 0.8 183 chrX 9732331 intron Sp1 + chrX 9732422 intron Sp1 + chrX 9732514 intron Sp1 + chrX_5_9730001 chrX_9730001 RAL-109_125b 4037 chrX 9791821 9791891 chrX 9791968 9792038 16 146 7.0 6.0 6.5 2.1 217 chrX 9791821 intron CG32698 + chrX 9791930 intron CG32698 + chrX 9792038 intron CG32698 + chrX_16_9790001 chrX_9790001 RAL-109_125b 4038 chrX 9839304 9839327 chrX 9839437 9839460 7 133 4.5 5.5 5.0 1.2 156 chrX 9839304 intron CG32698 + chrX 9839382 intron CG32698 + chrX 9839460 intron CG32698 + chrX_7_9835001 chrX_9835001 RAL-109_125b 4039 chrX 10133586 10133617 chrX 10133723 10133746 6 136 16.0 15.5 15.8 0.4 160 chrX 10133586 intron,intron RhoU +,CR44894 - chrX 10133666 intron,intron RhoU +,CR44894 - chrX 10133746 intron,intron RhoU +,CR44894 - chrX_6_10130001 chrX_10130001 RAL-109_125b 4040 chrX 10138173 10138235 chrX 10145727 10145788 412 24 7553 10.0 5.0 7.5 2.8 7615 chrX 10138173 intron,intron RhoU +,CR44894 - chrX 10141980 intron,intron RhoU +,CR44894 - chrX 10145788 intron,intron RhoU +,CR44894 - chrX_24_10140001 chrX_10140001 RAL-109_125b 4041 chrX 10151884 10151896 chrX 10152011 10152023 4 127 6.5 8.0 7.2 0.5 139 chrX 10151884 intron CR44894 - chrX 10151954 intron CR44894 - chrX 10152023 intron CR44894 - chrX_4_10150001 chrX_10150001 RAL-109_125b 4042 chrX 10151901 10151935 chrX 10152009 10152062 5 121 5.0 7.5 6.2 0.7 161 chrX 10151901 intron CR44894 - chrX 10151982 intron CR44894 - chrX 10152062 intron CR44894 - chrX_5_10150001 chrX_10150001 RAL-109_125b 4043 chrX 10157226 10157250 chrX 10158069 10158093 6 842 0.0 10.0 5.0 1.0 867 chrX 10157226 intron CR44894 - chrX 10157660 intron CR44894 - chrX 10158093 intron CR44894 - chrX_6_10155001 chrX_10155001 RAL-109_125b 4044 chrX 10167615 10167687 chrX 10167776 10167823 20 148 8.0 4.5 6.2 2.8 208 chrX 10167615 intron,intron CR44894 -,CG43902 + chrX 10167719 intron,intron CR44894 -,CG43902 + chrX 10167823 intron,intron CR44894 -,CG43902 + chrX_20_10165001 chrX_10165001 RAL-109_125b 4045 chrX 10242999 10243040 chrX 10243126 10243167 9 127 0.0 15.5 7.8 1.0 168 chrX 10242999 intron Hk - chrX 10243083 intron Hk - chrX 10243167 intron Hk - chrX_9_10240001 chrX_10240001 RAL-109_125b 4046 chrX 10267298 10267324 chrX 10276498 10276524 roo 6 9200 0.0 4.0 2.0 2.0 9226 chrX 10267298 3` UTR alpha-Man-I - chrX 10271911 intron alpha-Man-I - chrX 10276524 3` UTR alpha-Man-I - chrX_6_10270001 chrX_10270001 RAL-109_125b 4047 chrX 10284996 10285034 chrX 10285119 10285163 13 128 7.0 5.0 6.0 1.9 167 chrX 10284996 intron alpha-Man-I - chrX 10285080 intron alpha-Man-I - chrX 10285163 intron alpha-Man-I - chrX_13_10285001 chrX_10285001 RAL-109_125b 4048 chrX 10345186 10345218 chrX 10345344 10345370 7 155 6.5 7.0 6.8 0.9 184 chrX 10345186 intron CG43740 + chrX 10345278 intron CG43740 + chrX 10345370 intron CG43740 + chrX_7_10345001 chrX_10345001 RAL-109_125b 4049 chrX 10345219 10345232 chrX 10345377 10345379 5 154 5.0 13.5 9.2 0.5 160 chrX 10345219 intron CG43740 + chrX 10345299 intron CG43740 + chrX 10345379 intron CG43740 + chrX_5_10345001 chrX_10345001 RAL-109_125b 4050 chrX 10345243 10345252 chrX 10345356 10345380 4 135 4.0 8.5 6.2 0.6 137 chrX 10345243 intron CG43740 + chrX 10345312 intron CG43740 + chrX 10345380 intron CG43740 + chrX_4_10345001 chrX_10345001 RAL-109_125b 4051 chrX 10348760 10348817 chrX 10356375 10356432 springer 18 7613 14.5 7.0 10.8 1.5 7672 chrX 10348760 intergenic snoRNA:U3:9B + chrX 10352596 intergenic not near genes chrX 10356432 intergenic l(1)G0289 - chrX_18_10350001 chrX_10350001 RAL-109_125b 4052 chrX 10367148 10367200 chrX 10367307 10367331 16 152 5.0 11.5 8.2 1.7 183 chrX 10367148 exon CG32679 - chrX 10367240 intron CG32679 - chrX 10367331 exon CG32679 - chrX_16_10365001 chrX_10365001 RAL-109_125b 4053 chrX 10433852 10433863 chrX 10434097 10434107 7 245 18.5 12.0 15.2 0.4 255 chrX 10433852 intron CG32683 - chrX 10433980 intron CG32683 - chrX 10434107 intron CG32683 - chrX_7_10430001 chrX_10430001 RAL-109_125b 4054 chrX 10433865 10433919 chrX 10434095 10434163 20 238 9.0 10.5 9.8 1.9 298 chrX 10433865 intron CG32683 - chrX 10434014 intron CG32683 - chrX 10434163 intron CG32683 - chrX_20_10430001 chrX_10430001 RAL-109_125b 4055 chrX 10525028 10525070 chrX 10532147 10532189 297 6 7118 9.0 6.0 7.5 0.7 7161 chrX 10525028 intron spri - chrX 10528608 intron spri - chrX 10532189 intron spri - chrX_6_10525001 chrX_10525001 RAL-109_125b 4056 chrX 10550293 10550365 chrX 10550421 10550438 22 125 7.0 5.5 6.2 3.1 145 chrX 10550293 intron spri - chrX 10550366 intron spri - chrX 10550438 intron spri - chrX_22_10550001 chrX_10550001 RAL-109_125b 4057 chrX 10550853 10550879 chrX 10552329 10552396 hobo 9 1509 1.5 6.5 4.0 1.8 1543 chrX 10550853 intron spri - chrX 10551624 intron spri - chrX 10552396 intron spri - chrX_9_10550001 chrX_10550001 RAL-109_125b 4058 chrX 10675234 10675293 chrX 10675647 10675706 21 412 7.5 8.5 8.0 2.3 472 chrX 10675234 intron X11Lbeta + chrX 10675470 intron X11Lbeta + chrX 10675706 intron X11Lbeta + chrX_21_10675001 chrX_10675001 RAL-109_125b 4059 chrX 10686010 10686076 chrX 10691197 10691263 roo 18 5186 5.0 2.0 3.5 4.0 5253 chrX 10686010 intron X11Lbeta + chrX 10688636 intron X11Lbeta + chrX 10691263 intron X11Lbeta + chrX_18_10685001 chrX_10685001 RAL-109_125b 4060 chrX 10719070 10719138 chrX 10719215 10719272 7 137 0.0 6.5 3.2 1.7 202 chrX 10719070 intron CG32676 - chrX 10719171 intron CG32676 - chrX 10719272 intron CG32676 - chrX_7_10715001 chrX_10715001 RAL-109_125b 4061 chrX 10772634 10772698 chrX 10772767 10772831 Tirant 21 128 7.0 5.5 6.2 2.9 197 chrX 10772634 intron CG15211 + chrX 10772732 intron CG15211 + chrX 10772831 intron CG15211 + chrX_21_10770001 chrX_10770001 RAL-109_125b 4062 chrX 10802989 10803039 chrX 10803124 10803174 18 129 12.5 8.5 10.5 1.6 185 chrX 10802989 intron Imp - chrX 10803082 intron Imp - chrX 10803174 intron Imp - chrX_18_10800001 chrX_10800001 RAL-109_125b 4063 chrX 10899795 10899845 chrX 10899934 10899984 15 138 8.0 7.5 7.8 1.7 189 chrX 10899795 intergenic CG15208 + chrX 10899890 intergenic CG15208 + chrX 10899984 5` UTR CG15208 + chrX_15_10895001 chrX_10895001 RAL-109_125b 4064 chrX 11095961 11096020 chrX 11103106 11103172 HMS-Beagle 15 7151 8.5 12.0 10.2 1.3 7211 chrX 11095961 intergenic not near genes chrX 11099566 intergenic not near genes chrX 11103172 intron CG42249 + chrX_15_11095001 chrX_11095001 RAL-109_125b 4065 chrX 11109417 11109417 chrX 12946232 12946234 7 1836817 28.5 28.0 28.2 0.2 1836817 chrX 11109417 intron Hsp60 + chrX 12027826 exon Usp7 - chrX 12946234 3` UTR fne + chrX_7_12025001 chrX_12025001 RAL-109_125b 4066 chrX 11167758 11167798 chrX 11167875 11167945 12 128 0.5 4.0 2.2 3.8 187 chrX 11167758 intergenic antdh - chrX 11167852 intergenic antdh - chrX 11167945 intergenic antdh - chrX_12_11165001 chrX_11165001 RAL-109_125b 4067 chrX 11184243 11184276 chrX 11189368 11189402 flea 5 5125 6.0 0.5 3.2 1.2 5159 chrX 11184243 intergenic not near genes chrX 11186822 intergenic not near genes chrX 11189402 intergenic not near genes chrX_5_11185001 chrX_11185001 RAL-109_125b 4068 chrX 11189335 11189400 chrX 11190027 11190092 13 690 0.5 7.0 3.8 2.7 757 chrX 11189335 intergenic not near genes chrX 11189714 intergenic not near genes chrX 11190092 intergenic not near genes chrX_13_11185001 chrX_11185001 RAL-109_125b 4069 chrX 11205249 11205304 chrX 11205374 11205430 12 126 5.5 7.5 6.5 1.6 181 chrX 11205249 intergenic not near genes chrX 11205340 intergenic not near genes chrX 11205430 intergenic not near genes chrX_12_11205001 chrX_11205001 RAL-109_125b 4070 chrX 11254125 11254191 chrX 11254286 11254352 22 158 12.5 6.5 9.5 2.1 227 chrX 11254125 intron CG44422 - chrX 11254238 intron CG44422 - chrX 11254352 intron CG44422 - chrX_22_11250001 chrX_11250001 RAL-109_125b 4071 chrX 11268556 11268567 chrX 11270064 11270110 hopper2 4 1526 0.5 8.0 4.2 0.8 1554 chrX 11268556 intron CG44422 - chrX 11269333 intron CG44422 - chrX 11270110 intron CG44422 - chrX_4_11265001 chrX_11265001 RAL-109_125b 4072 chrX 11292956 11292969 chrX 11293082 11293095 5 126 6.5 0.0 3.2 1.2 139 chrX 11292956 intron CG44422 - chrX 11293026 intron CG44422 - chrX 11293095 intron CG44422 - chrX_5_11290001 chrX_11290001 RAL-109_125b 4073 chrX 11312015 11312082 chrX 11319418 11319454 Stalker2 16 7390 5.0 7.0 6.0 2.3 7439 chrX 11312015 intergenic not near genes chrX 11315734 intergenic not near genes chrX 11319454 intergenic not near genes chrX_16_11315001 chrX_11315001 RAL-109_125b 4074 chrX 11351471 11351498 chrX 11351601 11351625 12 140 15.0 8.5 11.8 0.9 154 chrX 11351471 intron CG1737 + chrX 11351548 intron CG1737 + chrX 11351625 intron CG1737 + chrX_12_11350001 chrX_11350001 RAL-109_125b 4075 chrX 11351509 11351536 chrX 11351600 11351639 8 124 8.0 7.0 7.5 0.9 130 chrX 11351509 intron CG1737 + chrX 11351574 intron CG1737 + chrX 11351639 intron CG1737 + chrX_8_11350001 chrX_11350001 RAL-109_125b 4076 chrX 11379715 11379790 chrX 11379910 11379985 35 193 5.5 7.0 6.2 4.9 270 chrX 11379715 intron dlg1 + chrX 11379850 intron dlg1 + chrX 11379985 intron dlg1 + chrX_35_11375001 chrX_11375001 RAL-109_125b 4077 chrX 11535000 11535041 chrX 11541520 11541561 Burdock 12 6518 7.0 9.5 8.2 1.3 6561 chrX 11535000 intron Drak + chrX 11538280 intron Drak + chrX 11541561 intron Drak + chrX_12_11535001 chrX_11535001 RAL-109_125b 4078 chrX 11571414 11571476 chrX 11571700 11571767 pogo 24 290 8.5 8.0 8.2 2.6 353 chrX 11571414 3` UTR Kmn1 - chrX 11571590 3` UTR Kmn1 - chrX 11571767 3` UTR Kmn1 - chrX_24_11570001 chrX_11570001 RAL-109_125b 4079 chrX 11633391 11633413 chrX 11640495 11640517 297 7 7104 14.5 13.5 14.0 0.5 7126 chrX 11633391 intron Ptp10D + chrX 11636954 intron Ptp10D + chrX 11640517 intron Ptp10D + chrX_7_11635001 chrX_11635001 RAL-109_125b 4080 chrX 11633414 11633427 chrX 11640486 11640531 297 9 7100 12.0 12.0 12.0 0.7 7117 chrX 11633414 intron Ptp10D + chrX 11636972 intron Ptp10D + chrX 11640531 intron Ptp10D + chrX_9_11635001 chrX_11635001 RAL-109_125b 4081 chrX 11645078 11645125 chrX 11648298 11648344 NOF 10 3220 3.5 4.5 4.0 2.0 3266 chrX 11645078 intron Ptp10D + chrX 11646711 intron Ptp10D + chrX 11648344 intron Ptp10D + chrX_10_11645001 chrX_11645001 RAL-109_125b 4082 chrX 11719838 11719860 chrX 11719968 11719985 6 129 16.0 12.0 14.0 0.4 147 chrX 11719838 3` UTR prtp + chrX 11719912 intergenic prtp +,Tango10 + chrX 11719985 intergenic prtp +,Tango10 + chrX_6_11715001 chrX_11715001 RAL-109_125b 4083 chrX 11719862 11719883 chrX 11719952 11720013 6 123 9.5 8.5 9.0 0.6 151 chrX 11719862 3` UTR prtp + chrX 11719938 intergenic prtp +,Tango10 + chrX 11720013 intergenic prtp +,Tango10 + chrX_6_11715001 chrX_11715001 RAL-109_125b 4084 chrX 11761959 11761997 chrX 11762088 11762126 12 125 3.0 4.5 3.8 2.5 167 chrX 11761959 intron m + chrX 11762042 intron m + chrX 11762126 intron m + chrX_12_11760001 chrX_11760001 RAL-109_125b 4085 chrX 11798971 11799017 chrX 11799107 11799153 7 136 6.5 10.0 8.2 0.8 182 chrX 11798971 intron CkIIbeta + chrX 11799062 intron CkIIbeta + chrX 11799153 intron CkIIbeta + chrX_7_11795001 chrX_11795001 RAL-109_125b 4086 chrX 11922317 11922383 chrX 11922500 11922566 18 183 6.5 5.0 5.8 2.6 249 chrX 11922317 exon Sclp - chrX 11922442 intron Sclp - chrX 11922566 intron Sclp - chrX_18_11920001 chrX_11920001 RAL-109_125b 4087 chrX 12043790 12043823 chrX 12043929 12043962 17 136 10.5 5.5 8.0 1.9 172 chrX 12043790 5` UTR,5` UTR CR43960 +,Ten-a + chrX 12043876 5` UTR,5` UTR CR43960 +,Ten-a + chrX 12043962 5` UTR,5` UTR CR43960 +,Ten-a + chrX_17_12040001 chrX_12040001 RAL-109_125b 4088 chrX 12043830 12043852 chrX 12043925 12043991 8 134 6.0 5.5 5.8 1.2 161 chrX 12043830 5` UTR,5` UTR CR43960 +,Ten-a + chrX 12043910 5` UTR,5` UTR CR43960 +,Ten-a + chrX 12043991 5` UTR,5` UTR CR43960 +,Ten-a + chrX_8_12040001 chrX_12040001 RAL-109_125b 4089 chrX 12094018 12094041 chrX 12094136 12094183 9 132 7.0 6.0 6.5 1.2 165 chrX 12094018 intron,intron CR43960 +,Ten-a + chrX 12094100 intron,intron CR43960 +,Ten-a + chrX 12094183 intron,intron CR43960 +,Ten-a + chrX_9_12090001 chrX_12090001 RAL-109_125b 4090 chrX 12168095 12168128 chrX 12173587 12173620 I-element 8 5491 5.0 3.5 4.2 1.5 5525 chrX 12168095 intron Ten-a + chrX 12170858 intron Ten-a + chrX 12173620 intron Ten-a + chrX_8_12170001 chrX_12170001 RAL-109_125b 4091 chrX 12245662 12245719 chrX 12245787 12245852 9 122 3.0 8.0 5.5 1.4 190 chrX 12245662 intron Ten-a + chrX 12245757 intron Ten-a + chrX 12245852 intron Ten-a + chrX_9_12245001 chrX_12245001 RAL-109_125b 4092 chrX 12246934 12246966 chrX 12247061 12247104 8 137 7.5 2.0 4.8 1.4 170 chrX 12246934 intron Ten-a + chrX 12247019 intron Ten-a + chrX 12247104 intron Ten-a + chrX_8_12245001 chrX_12245001 RAL-109_125b 4093 chrX 12272803 12272860 chrX 12272929 12272984 10 126 1.5 4.5 3.0 2.5 181 chrX 12272803 intron Ten-a + chrX 12272894 intron Ten-a + chrX 12272984 intron Ten-a + chrX_10_12270001 chrX_12270001 RAL-109_125b 4094 chrX 12295274 12295326 chrX 12295400 12295445 13 122 6.5 6.5 6.5 1.7 171 chrX 12295274 exon Ten-a + chrX 12295360 intron Ten-a + chrX 12295445 intron Ten-a + chrX_13_12295001 chrX_12295001 RAL-109_125b 4095 chrX 12375449 12375492 chrX 12375592 12375639 14 143 9.0 3.5 6.2 1.9 190 chrX 12375449 intergenic Ir11a - chrX 12375544 intergenic Ir11a - chrX 12375639 exon Ir11a - chrX_14_12375001 chrX_12375001 RAL-109_125b 4096 chrX 12381808 12381898 chrX 12385771 12385838 flea 12 3961 0.0 3.5 1.8 4.3 4030 chrX 12381808 intergenic not near genes chrX 12383823 intergenic not near genes chrX 12385838 intergenic not near genes chrX_12_12380001 chrX_12380001 RAL-109_125b 4097 chrX 12465430 12465498 chrX 12465556 12465613 11 124 2.5 0.0 1.2 5.0 183 chrX 12465430 exon CG42258 + chrX 12465522 intron CG42258 + chrX 12465613 intron CG42258 + chrX_11_12465001 chrX_12465001 RAL-109_125b 4098 chrX 12511275 12511350 chrX 12511407 12511484 13 128 0.0 5.5 2.8 3.4 209 chrX 12511275 intron CG2556 + chrX 12511380 intron CG2556 + chrX 12511484 intron CG2556 + chrX_13_12510001 chrX_12510001 RAL-109_125b 4099 chrX 12528826 12528835 chrX 12528944 12528949 4 121 8.5 0.5 4.5 0.7 123 chrX 12528826 intron CG43921 - chrX 12528888 intron CG43921 - chrX 12528949 intron CG43921 - chrX_4_12525001 chrX_12525001 RAL-109_125b 4100 chrX 12533774 12533819 chrX 12533901 12533929 6 124 0.0 9.5 4.8 1.0 155 chrX 12533774 intron CG43921 - chrX 12533852 intron CG43921 - chrX 12533929 intron CG43921 - chrX_6_12530001 chrX_12530001 RAL-109_125b 4101 chrX 9845361 9845361 chrX 12546496 12546496 gypsy5 4 2701135 40.0 31.5 35.8 0.1 2701135 chrX 9845361 intron CG32698 + chrX 11195928 intergenic not near genes chrX 12546496 intron CG43921 - chrX_4_11195001 chrX_11195001 RAL-109_125b 4102 chrX 5190129 5190151 chrX 12649915 12649915 5 7459775 14.5 22.0 18.2 0.3 7459786 chrX 5190129 intron,intron CG15465 +,rg + chrX 8920022 intron,3` UTR rdgA +,CR44111 - chrX 12649915 intron Tomosyn + chrX_5_8920001 chrX_8920001 RAL-109_125b 4103 chrX 12754655 12754679 chrX 12754893 12754917 8 236 6.0 9.5 7.8 0.9 262 chrX 12754655 intergenic CR44619 + chrX 12754786 intergenic CR44619 + chrX 12754917 intergenic CR44619 + chrX_8_12750001 chrX_12750001 RAL-109_125b 4104 chrX 12878297 12878371 chrX 12878426 12878500 16 128 5.5 4.5 5.0 2.7 203 chrX 12878297 intron Pde9 - chrX 12878398 intron Pde9 - chrX 12878500 intron Pde9 - chrX_16_12875001 chrX_12875001 RAL-109_125b 4105 chrX 12930565 12930601 chrX 12937731 12937765 HMS-Beagle 5 7166 7.5 11.5 9.5 0.5 7200 chrX 12930565 intron fne + chrX 12934165 intron fne + chrX 12937765 intron fne + chrX_5_12930001 chrX_12930001 RAL-109_125b 4106 chrX 11109417 11109417 chrX 12946233 12946233 4 1836816 28.5 27.0 27.8 0.1 1836816 chrX 11109417 intron Hsp60 + chrX 12027825 exon Usp7 - chrX 12946233 3` UTR fne + chrX_4_12025001 chrX_12025001 RAL-109_125b 4107 chrX 12953859 12953920 chrX 12954047 12954109 14 189 3.0 4.0 3.5 3.1 250 chrX 12953859 intron hec - chrX 12953984 intron hec - chrX 12954109 intron hec - chrX_14_12950001 chrX_12950001 RAL-109_125b 4108 chrX 12960724 12960754 chrX 12960855 12960885 8 131 10.0 4.5 7.2 1.0 161 chrX 12960724 3` UTR CG32642 + chrX 12960804 intergenic CG32642 + chrX 12960885 intergenic CG32642 + chrX_8_12960001 chrX_12960001 RAL-109_125b 4109 chrX 12960758 12960778 chrX 12960850 12960909 5 120 6.5 5.0 5.8 0.7 151 chrX 12960758 3` UTR CG32642 + chrX 12960834 intergenic CG32642 + chrX 12960909 intergenic CG32642 + chrX_5_12960001 chrX_12960001 RAL-109_125b 4110 chrX 12971639 12971695 chrX 12971766 12971785 14 114 13.0 14.5 13.8 0.9 146 chrX 12971639 intron,exon CR43636 -,CG15721 + chrX 12971712 intron,exon CR43636 -,CG15721 + chrX 12971785 intron,exon CR43636 -,CG15721 + chrX_14_12970001 chrX_12970001 RAL-109_125b 4111 chrX 12977022 12977063 chrX 12977148 12977189 5 126 2.5 16.0 9.2 0.5 167 chrX 12977022 intergenic not near genes chrX 12977106 intergenic not near genes chrX 12977189 intergenic not near genes chrX_5_12975001 chrX_12975001 RAL-109_125b 4112 chrX 13018472 13018527 chrX 13018606 13018661 16 134 6.0 3.0 4.5 2.9 189 chrX 13018472 intron rad + chrX 13018566 intron rad + chrX 13018661 intron rad + chrX_16_13015001 chrX_13015001 RAL-109_125b 4113 chrX 13146552 13146625 chrX 13146690 13146763 31 138 7.5 7.5 7.5 3.6 211 chrX 13146552 intron CG32645 + chrX 13146658 intron CG32645 + chrX 13146763 intron CG32645 + chrX_31_13145001 chrX_13145001 RAL-109_125b 4114 chrX 13168523 13168572 chrX 13168674 13168723 9 151 2.5 8.0 5.2 1.5 200 chrX 13168523 intron CG34411 - chrX 13168623 intron CG34411 - chrX 13168723 intron CG34411 - chrX_9_13165001 chrX_13165001 RAL-109_125b 4115 chrX 13172311 13172366 chrX 13172437 13172476 8 118 6.0 4.5 5.2 1.3 165 chrX 13172311 intron CG34411 - chrX 13172394 intron CG34411 - chrX 13172476 intron CG34411 - chrX_8_13170001 chrX_13170001 RAL-109_125b 4116 chrX 13236831 13236894 chrX 13236963 13237029 11 132 1.0 4.0 2.5 3.1 198 chrX 13236831 intron mew - chrX 13236930 intron mew - chrX 13237029 intron mew - chrX_11_13235001 chrX_13235001 RAL-109_125b 4117 chrX 13255201 13255222 chrX 13255280 13255337 11 115 2.5 8.0 5.2 1.8 136 chrX 13255201 intron mew - chrX 13255269 intron mew - chrX 13255337 intron mew - chrX_11_13255001 chrX_13255001 RAL-109_125b 4118 chrX 13278123 13278184 chrX 13278256 13278317 20 133 6.5 7.5 7.0 2.5 194 chrX 13278123 intron HDAC4 - chrX 13278220 intron HDAC4 - chrX 13278317 intron HDAC4 - chrX_20_13275001 chrX_13275001 RAL-109_125b 4119 chrX 13314373 13314391 chrX 13314518 13314536 7 145 9.5 0.0 4.8 1.2 163 chrX 13314373 intron IP3K2 + chrX 13314454 intron IP3K2 + chrX 13314536 intron IP3K2 + chrX_7_13310001 chrX_13310001 RAL-109_125b 4120 chrX 13354903 13354927 chrX 13355030 13355054 7 124 7.5 0.0 3.8 1.5 151 chrX 13354903 intergenic not near genes chrX 13354978 intergenic not near genes chrX 13355054 intergenic not near genes chrX_7_13350001 chrX_13350001 RAL-109_125b 4121 chrX 13374796 13374809 chrX 13374926 13374939 4 130 11.0 7.0 9.0 0.4 143 chrX 13374796 intron CG1640 + chrX 13374868 intron CG1640 + chrX 13374939 intron CG1640 + chrX_4_13370001 chrX_13370001 RAL-109_125b 4122 chrX 13374811 13374862 chrX 13374924 13374987 17 126 6.0 7.0 6.5 2.3 176 chrX 13374811 intron CG1640 + chrX 13374899 intron CG1640 + chrX 13374987 intron CG1640 + chrX_17_13370001 chrX_13370001 RAL-109_125b 4123 chrX 13375519 13375524 chrX 13375658 13375663 6 139 0.5 16.0 8.2 0.7 144 chrX 13375519 intron CG1640 + chrX 13375591 intron CG1640 + chrX 13375663 intron CG1640 + chrX_6_13375001 chrX_13375001 RAL-109_125b 4124 chrX 13375525 13375539 chrX 13375628 13375678 6 132 0.0 7.5 3.8 1.2 153 chrX 13375525 intron CG1640 + chrX 13375602 intron CG1640 + chrX 13375678 intron CG1640 + chrX_6_13375001 chrX_13375001 RAL-109_125b 4125 chrX 13401438 13401509 chrX 13401840 13401911 jockey 16 402 5.0 3.0 4.0 3.2 473 chrX 13401438 intergenic CG1673 +,CG12725 - chrX 13401674 intergenic CG12725 -,CG1673 + chrX 13401911 3` UTR CG12725 - chrX_16_13400001 chrX_13400001 RAL-109_125b 4126 chrX 13409139 13409183 chrX 13409275 13409319 22 136 2.0 11.0 6.5 2.9 180 chrX 13409139 3` UTR GstT4 + chrX 13409229 3` UTR GstT4 + chrX 13409319 3` UTR GstT4 + chrX_22_13405001 chrX_13405001 RAL-109_125b 4127 chrX 13409184 13409201 chrX 13409270 13409337 7 129 2.0 9.0 5.5 1.1 153 chrX 13409184 3` UTR GstT4 + chrX 13409260 3` UTR GstT4 + chrX 13409337 intergenic GstT4 +,CG1998 - chrX_7_13405001 chrX_13405001 RAL-109_125b 4128 chrX 13429408 13429489 chrX 13430607 13430671 jockey 11 1192 0.0 7.5 3.8 2.3 1263 chrX 13429408 intergenic not near genes chrX 13430040 intergenic not near genes chrX 13430671 intergenic not near genes chrX_11_13430001 chrX_13430001 RAL-109_125b 4129 chrX 13463610 13463678 chrX 13469237 13469305 mdg3 16 5626 5.5 5.0 5.2 2.6 5695 chrX 13463610 intron Neto + chrX 13466458 intron Neto + chrX 13469305 intron Neto + chrX_16_13465001 chrX_13465001 RAL-109_125b 4130 chrX 13493760 13493787 chrX 13493887 13493897 9 122 15.5 10.0 12.8 0.7 137 chrX 13493760 intron Neto + chrX 13493828 intron Neto + chrX 13493897 intron Neto + chrX_9_13490001 chrX_13490001 RAL-109_125b 4131 chrX 13546939 13547019 chrX 13547084 13547163 12 142 4.0 5.5 4.8 2.1 224 chrX 13546939 intergenic not near genes chrX 13547051 intergenic not near genes chrX 13547163 intergenic not near genes chrX_12_13545001 chrX_13545001 RAL-109_125b 4132 chrX 13563379 13563450 chrX 13563507 13563557 21 128 3.0 3.0 3.0 5.2 178 chrX 13563379 intergenic CG32633 +,Tango13 + chrX 13563468 intergenic CG32633 +,Tango13 + chrX 13563557 intergenic CG32633 +,Tango13 + chrX_21_13560001 chrX_13560001 RAL-109_125b 4133 chrX 13880240 13880245 chrX 13880351 13880372 6 124 12.5 9.0 10.8 0.5 132 chrX 13880240 intron mamo - chrX 13880306 intron mamo - chrX 13880372 intron mamo - chrX_6_13880001 chrX_13880001 RAL-109_125b 4134 chrX 13908761 13908777 chrX 13908878 13908891 5 115 9.5 7.0 8.2 0.5 130 chrX 13908761 intron mamo - chrX 13908826 intron mamo - chrX 13908891 intron mamo - chrX_5_13905001 chrX_13905001 RAL-109_125b 4135 chrX 13934255 13934307 chrX 13934387 13934440 8 133 6.5 5.5 6.0 1.1 185 chrX 13934255 intron mamo - chrX 13934348 intron mamo - chrX 13934440 intron mamo - chrX_8_13930001 chrX_13930001 RAL-109_125b 4136 chrX 13935475 13935504 chrX 13935608 13935637 10 133 12.0 9.0 10.5 0.9 162 chrX 13935475 intron mamo - chrX 13935556 intron mamo - chrX 13935637 intron mamo - chrX_10_13935001 chrX_13935001 RAL-109_125b 4137 chrX 13935505 13935523 chrX 13935598 13935653 9 127 7.0 8.0 7.5 1.1 148 chrX 13935505 intron mamo - chrX 13935579 intron mamo - chrX 13935653 intron mamo - chrX_9_13935001 chrX_13935001 RAL-109_125b 4138 chrX 13937951 13937977 chrX 13941272 13941297 I-element 7 3321 4.5 5.5 5.0 1.2 3346 chrX 13937951 intron mamo - chrX 13939624 intron mamo - chrX 13941297 intron mamo - chrX_7_13935001 chrX_13935001 RAL-109_125b 4139 chrX 14030700 14030724 chrX 14035336 14035360 copia 8 4635 12.0 7.5 9.8 0.7 4660 chrX 14030700 intergenic not near genes chrX 14033030 intergenic not near genes chrX 14035360 intergenic not near genes chrX_8_14030001 chrX_14030001 RAL-109_125b 4140 chrX 14064149 14064174 chrX 14064245 14064321 4 134 0.0 4.0 2.0 1.3 172 chrX 14064149 intergenic not near genes chrX 14064235 intergenic not near genes chrX 14064321 intergenic not near genes chrX_4_14060001 chrX_14060001 RAL-109_125b 4141 chrX 14104983 14105054 chrX 14114184 14114211 roo 23 9190 5.5 7.5 6.5 3.1 9228 chrX 14104983 intergenic not near genes chrX 14109597 intergenic not near genes chrX 14114211 5` UTR CR44657 + chrX_23_14105001 chrX_14105001 RAL-109_125b 4142 chrX 14131437 14131514 chrX 14131569 14131645 18 122 2.0 3.5 2.8 4.7 208 chrX 14131437 intergenic not near genes chrX 14131541 intergenic not near genes chrX 14131645 intergenic not near genes chrX_18_14130001 chrX_14130001 RAL-109_125b 4143 chrX 14157558 14157567 chrX 14163255 14163274 297 5 5705 14.0 4.5 9.2 0.5 5716 chrX 14157558 intergenic not near genes chrX 14160416 intergenic not near genes chrX 14163274 intergenic not near genes chrX_5_14160001 chrX_14160001 RAL-109_125b 4144 chrX 14167365 14167432 chrX 14167510 14167577 20 143 7.0 9.0 8.0 2.2 212 chrX 14167365 intergenic not near genes chrX 14167471 intergenic not near genes chrX 14167577 intergenic not near genes chrX_20_14165001 chrX_14165001 RAL-109_125b 4145 chrX 14178838 14178900 chrX 14179098 14179160 15 258 3.5 7.0 5.2 2.4 322 chrX 14178838 intergenic CG11581 + chrX 14178999 intergenic not near genes chrX 14179160 intergenic not near genes chrX_15_14175001 chrX_14175001 RAL-109_125b 4146 chrX 14203594 14203644 chrX 14203720 14203782 14 133 5.0 8.5 6.8 1.8 188 chrX 14203594 exon l(1)G0007 + chrX 14203688 intron l(1)G0007 + chrX 14203782 intron l(1)G0007 + chrX_14_14200001 chrX_14200001 RAL-109_125b 4147 chrX 14209416 14209480 chrX 14209557 14209621 12 140 6.5 6.5 6.5 1.6 205 chrX 14209416 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209518 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209621 intron,intron l(1)G0007 +,l(1)G0469 - chrX_12_14205001 chrX_14205001 RAL-109_125b 4148 chrX 14333262 14333290 chrX 14333377 14333401 10 118 6.0 6.5 6.2 1.4 139 chrX 14333262 intron dpr8 + chrX 14333332 intron dpr8 + chrX 14333401 intron dpr8 + chrX_10_14330001 chrX_14330001 RAL-109_125b 4149 chrX 14333300 14333317 chrX 14333372 14333393 6 93 3.0 6.0 4.5 1.1 93 chrX 14333300 intron dpr8 + chrX 14333346 intron dpr8 + chrX 14333393 intron dpr8 + chrX_6_14330001 chrX_14330001 RAL-109_125b 4150 chrX 14381363 14381411 chrX 14381567 14381615 15 203 6.0 5.0 5.5 2.3 252 chrX 14381363 intron,3` UTR dpr8 +,betaNACtes4 + chrX 14381489 intron dpr8 + chrX 14381615 intron dpr8 + chrX_15_14380001 chrX_14380001 RAL-109_125b 4151 chrX 14383915 14383938 chrX 14384049 14384072 10 131 6.0 10.0 8.0 1.1 157 chrX 14383915 intron dpr8 + chrX 14383994 intron dpr8 + chrX 14384072 intron dpr8 + chrX_10_14380001 chrX_14380001 RAL-109_125b 4152 chrX 14384807 14384848 chrX 14385054 14385066 9 241 9.5 5.5 7.5 1.1 259 chrX 14384807 intron dpr8 + chrX 14384936 intron dpr8 + chrX 14385066 intron dpr8 + chrX_9_14380001 chrX_14380001 RAL-109_125b 4153 chrX 14411213 14411270 chrX 14411341 14411375 18 126 5.0 5.5 5.2 2.9 162 chrX 14411213 intron dpr8 + chrX 14411294 intron dpr8 + chrX 14411375 intron dpr8 + chrX_18_14410001 chrX_14410001 RAL-109_125b 4154 chrX 14416273 14416314 chrX 14421092 14421132 F-element 8 4818 6.5 8.5 7.5 0.9 4859 chrX 14416273 intron dpr8 + chrX 14418702 intron dpr8 + chrX 14421132 intron dpr8 + chrX_8_14415001 chrX_14415001 RAL-109_125b 4155 chrX 14484944 14484986 chrX 14485058 14485125 13 133 0.0 3.0 1.5 5.2 181 chrX 14484944 intergenic not near genes chrX 14485034 intergenic not near genes chrX 14485125 intergenic not near genes chrX_13_14485001 chrX_14485001 RAL-109_125b 4156 chrX 14508413 14508464 chrX 14508600 14508651 11 179 5.0 4.5 4.8 1.9 238 chrX 14508413 intergenic not near genes chrX 14508532 intergenic not near genes chrX 14508651 intergenic not near genes chrX_11_14505001 chrX_14505001 RAL-109_125b 4157 chrX 14531320 14531385 chrX 14531459 14531524 17 139 3.5 2.5 3.0 4.2 204 chrX 14531320 intergenic not near genes chrX 14531422 intergenic not near genes chrX 14531524 intergenic not near genes chrX_17_14530001 chrX_14530001 RAL-109_125b 4158 chrX 14563463 14563486 chrX 14563790 14563803 8 324 14.5 5.0 9.8 0.7 340 chrX 14563463 intergenic not near genes chrX 14563633 intergenic not near genes chrX 14563803 intergenic not near genes chrX_8_14560001 chrX_14560001 RAL-109_125b 4159 chrX 14563491 14563516 chrX 14563783 14563805 9 311 10.0 4.0 7.0 1.1 314 chrX 14563491 intergenic not near genes chrX 14563648 intergenic not near genes chrX 14563805 intergenic not near genes chrX_9_14560001 chrX_14560001 RAL-109_125b 4160 chrX 14570029 14570107 chrX 14570161 14570238 9 132 1.5 0.0 0.8 5.0 209 chrX 14570029 intergenic not near genes chrX 14570134 intergenic not near genes chrX 14570238 intergenic not near genes chrX_9_14570001 chrX_14570001 RAL-109_125b 4161 chrX 14571159 14571183 chrX 14571276 14571296 5 115 10.0 8.5 9.2 0.5 137 chrX 14571159 intergenic not near genes chrX 14571228 intergenic not near genes chrX 14571296 intergenic not near genes chrX_5_14570001 chrX_14570001 RAL-109_125b 4162 chrX 14579068 14579132 chrX 14579200 14579264 25 128 6.0 9.5 7.8 2.8 196 chrX 14579068 intergenic not near genes chrX 14579166 intergenic not near genes chrX 14579264 intergenic not near genes chrX_25_14575001 chrX_14575001 RAL-109_125b 4163 chrX 14597694 14597705 chrX 14597821 14597829 7 126 15.0 8.0 11.5 0.6 135 chrX 14597694 intron CG9413 - chrX 14597762 intron CG9413 - chrX 14597829 intron CG9413 - chrX_7_14595001 chrX_14595001 RAL-109_125b 4164 chrX 14597706 14597752 chrX 14597818 14597879 18 122 6.0 7.0 6.5 2.4 173 chrX 14597706 intron CG9413 - chrX 14597792 intron CG9413 - chrX 14597879 intron CG9413 - chrX_18_14595001 chrX_14595001 RAL-109_125b 4165 chrX 14597984 14598002 chrX 14598126 14598144 7 141 16.0 10.0 13.0 0.5 160 chrX 14597984 intron CG9413 - chrX 14598064 intron CG9413 - chrX 14598144 intron CG9413 - chrX_7_14595001 chrX_14595001 RAL-109_125b 4166 chrX 14636432 14636479 chrX 14641923 14641965 I-element 18 5488 9.5 11.5 10.5 1.6 5533 chrX 14636432 intron NetA - chrX 14639198 intron NetA - chrX 14641965 intron NetA - chrX_18_14635001 chrX_14635001 RAL-109_125b 4167 chrX 14713993 14714061 chrX 14714125 14714193 19 131 6.0 6.0 6.0 2.7 200 chrX 14713993 intron NetB - chrX 14714093 intron NetB - chrX 14714193 intron NetB - chrX_19_14710001 chrX_14710001 RAL-109_125b 4168 chrX 14777996 14778048 chrX 14782843 14782895 Doc 19 4847 10.5 8.0 9.2 1.9 4899 chrX 14777996 intergenic CG5347 + chrX 14780446 intergenic not near genes chrX 14782895 intergenic Ag5r2 - chrX_19_14780001 chrX_14780001 RAL-109_125b 4169 chrX 14810158 14810175 chrX 14810286 14810303 8 127 1.5 0.0 0.8 4.4 145 chrX 14810158 intron rut - chrX 14810230 intron rut - chrX 14810303 intron rut - chrX_8_14810001 chrX_14810001 RAL-109_125b 4170 chrX 14818718 14818785 chrX 14823972 14824039 copia 14 5251 6.0 6.0 6.0 2.0 5321 chrX 14818718 intron rut - chrX 14821378 intron rut - chrX 14824039 intron rut - chrX_14_14820001 chrX_14820001 RAL-109_125b 4171 chrX 14881685 14881754 chrX 14881825 14881894 17 137 6.0 0.5 3.2 4.0 209 chrX 14881685 intron,intron,intron Flo2 +,CG45064 -,CG45065 - chrX 14881790 intron,intron,intron Flo2 +,CG45064 -,CG45065 - chrX 14881894 intron,intron,intron Flo2 +,CG45064 -,CG45065 - chrX_17_14880001 chrX_14880001 RAL-109_125b 4172 chrX 14926589 14926614 chrX 14926719 14926738 14 133 9.0 10.5 9.8 1.3 149 chrX 14926589 intron Flo2 + chrX 14926664 intron Flo2 + chrX 14926738 exon Flo2 + chrX_14_14925001 chrX_14925001 RAL-109_125b 4173 chrX 14936820 14936883 chrX 14946127 14946190 roo 20 9307 12.0 8.5 10.2 1.8 9370 chrX 14936820 intron pdgy - chrX 14941505 intron pdgy - chrX 14946190 intron pdgy - chrX_20_14940001 chrX_14940001 RAL-109_125b 4174 chrX 14968038 14968101 chrX 14968159 14968213 18 127 0.5 7.5 4.0 3.6 175 chrX 14968038 intron eag + chrX 14968126 intron eag + chrX 14968213 intron eag + chrX_18_14965001 chrX_14965001 RAL-109_125b 4175 chrX 14981683 14981737 chrX 14981812 14981866 12 129 3.0 4.0 3.5 2.7 183 chrX 14981683 intron eag + chrX 14981774 intron eag + chrX 14981866 intron eag + chrX_12_14980001 chrX_14980001 RAL-109_125b 4176 chrX 15029006 15029073 chrX 15029155 15029201 19 146 2.5 7.0 4.8 3.3 195 chrX 15029006 intron,intron hiw -,be + chrX 15029104 intron,intron hiw -,be + chrX 15029201 intron,intron hiw -,be + chrX_19_15025001 chrX_15025001 RAL-109_125b 4177 chrX 15059126 15059198 chrX 15059282 15059354 6 156 2.5 2.5 2.5 1.7 228 chrX 15059126 exon hiw - chrX 15059240 intron hiw - chrX 15059354 exon hiw - chrX_6_15055001 chrX_15055001 RAL-109_125b 4178 chrX 15127188 15127235 chrX 15127330 15127377 18 142 6.0 10.0 8.0 2.0 189 chrX 15127188 intron drd + chrX 15127282 intron drd + chrX 15127377 intron drd + chrX_18_15125001 chrX_15125001 RAL-109_125b 4179 chrX 15248220 15248264 chrX 15248346 15248379 9 119 6.5 2.5 4.5 1.6 159 chrX 15248220 intergenic not near genes chrX 15248300 intergenic not near genes chrX 15248379 intergenic not near genes chrX_9_15245001 chrX_15245001 RAL-109_125b 4180 chrX 15256452 15256482 chrX 15256690 15256704 7 235 14.5 5.0 9.8 0.6 252 chrX 15256452 intergenic not near genes chrX 15256578 intergenic not near genes chrX 15256704 intergenic not near genes chrX_7_15255001 chrX_15255001 RAL-109_125b 4181 chrX 15256483 15256527 chrX 15256686 15256697 16 223 7.0 4.5 5.8 2.4 214 chrX 15256483 intergenic not near genes chrX 15256590 intergenic not near genes chrX 15256697 intergenic not near genes chrX_16_15255001 chrX_15255001 RAL-109_125b 4182 chrX 15265835 15265867 chrX 15265961 15265979 6 120 9.5 7.0 8.2 0.7 144 chrX 15265835 intergenic not near genes chrX 15265907 intergenic not near genes chrX 15265979 intergenic not near genes chrX_6_15265001 chrX_15265001 RAL-109_125b 4183 chrX 15268842 15268890 chrX 15268960 15269000 9 126 7.0 8.0 7.5 1.1 158 chrX 15268842 intergenic not near genes chrX 15268921 intergenic not near genes chrX 15269000 intergenic not near genes chrX_9_15265001 chrX_15265001 RAL-109_125b 4184 chrX 15273677 15273730 chrX 15274880 15274947 1360 24 1204 5.5 6.0 5.8 3.5 1270 chrX 15273677 intergenic not near genes chrX 15274312 intergenic not near genes chrX 15274947 intergenic not near genes chrX_24_15270001 chrX_15270001 RAL-109_125b 4185 chrX 15326698 15326715 chrX 15326946 15326952 I-element 5 246 0.5 4.0 2.2 1.6 254 chrX 15326698 3` UTR Top1 + chrX 15326825 3` UTR Top1 + chrX 15326952 3` UTR Top1 + chrX_5_15325001 chrX_15325001 RAL-109_125b 4186 chrX 15369786 15369854 chrX 15369919 15369987 21 130 5.5 6.5 6.0 3.0 201 chrX 15369786 intron acj6 - chrX 15369886 intron acj6 - chrX 15369987 intron acj6 - chrX_21_15365001 chrX_15365001 RAL-109_125b 4187 chrX 15392832 15392841 chrX 15392942 15392944 5 111 10.0 9.0 9.5 0.5 112 chrX 15392832 exon Cngl - chrX 15392888 exon Cngl - chrX 15392944 exon Cngl - chrX_5_15390001 chrX_15390001 RAL-109_125b 4188 chrX 15413008 15413075 chrX 15417360 15417427 Juan 17 4352 7.5 7.0 7.2 2.1 4419 chrX 15413008 intron Cngl - chrX 15415218 intron Cngl - chrX 15417427 intron Cngl - chrX_17_15415001 chrX_15415001 RAL-109_125b 4189 chrX 15529242 15529283 chrX 15529373 15529413 7 131 4.0 6.5 5.2 1.1 171 chrX 15529242 intron Ac13E - chrX 15529328 intron Ac13E - chrX 15529413 intron Ac13E - chrX_7_15525001 chrX_15525001 RAL-109_125b 4190 chrX 15561940 15562009 chrX 15562098 15562167 25 155 4.5 3.5 4.0 5.0 227 chrX 15561940 intergenic not near genes chrX 15562054 intergenic not near genes chrX 15562167 intergenic not near genes chrX_25_15560001 chrX_15560001 RAL-109_125b 4191 chrX 15565586 15565666 chrX 15565722 15565792 21 135 10.0 6.5 8.2 2.3 206 chrX 15565586 intergenic not near genes chrX 15565689 intergenic not near genes chrX 15565792 intergenic not near genes chrX_21_15565001 chrX_15565001 RAL-109_125b 4192 chrX 15677985 15678067 chrX 15678113 15678178 20 118 8.0 6.0 7.0 2.5 193 chrX 15677985 intergenic CG12708 + chrX 15678082 intergenic CG12708 + chrX 15678178 intergenic CG12708 + chrX_20_15675001 chrX_15675001 RAL-109_125b 4193 chrX 15681354 15681365 chrX 15681486 15681497 4 132 10.5 6.5 8.5 0.4 143 chrX 15681354 intergenic not near genes chrX 15681426 intergenic not near genes chrX 15681497 intergenic not near genes chrX_4_15680001 chrX_15680001 RAL-109_125b 4194 chrX 15681371 15681425 chrX 15681478 15681553 8 127 5.0 5.5 5.2 1.3 182 chrX 15681371 intergenic not near genes chrX 15681462 intergenic not near genes chrX 15681553 intergenic not near genes chrX_8_15680001 chrX_15680001 RAL-109_125b 4195 chrX 16100604 16100681 chrX 16100766 16100844 20 155 5.5 7.5 6.5 2.7 240 chrX 16100604 intron,intron CG42353 -,CG42354 - chrX 16100724 intron,intron CG42353 -,CG42354 - chrX 16100844 intron,intron CG42353 -,CG42354 - chrX_20_16100001 chrX_16100001 RAL-109_125b 4196 chrX 16106938 16106974 chrX 16107054 16107107 10 125 9.0 8.5 8.8 1.0 169 chrX 16106938 intergenic not near genes chrX 16107022 intergenic not near genes chrX 16107107 intergenic not near genes chrX_10_16105001 chrX_16105001 RAL-109_125b 4197 chrX 16135603 16135630 chrX 16135705 16135744 5 117 4.5 7.0 5.8 0.7 141 chrX 16135603 intron disco-r - chrX 16135674 intron disco-r - chrX 16135744 intron disco-r - chrX_5_16135001 chrX_16135001 RAL-109_125b 4198 chrX 16160256 16160300 chrX 16160373 16160426 8 125 5.0 4.0 4.5 1.5 170 chrX 16160256 intergenic not near genes chrX 16160341 intergenic not near genes chrX 16160426 intergenic not near genes chrX_8_16160001 chrX_16160001 RAL-109_125b 4199 chrX 16171575 16171582 chrX 16171709 16171716 5 134 3.0 2.5 2.8 1.3 141 chrX 16171575 intergenic not near genes chrX 16171646 intergenic not near genes chrX 16171716 intergenic not near genes chrX_5_16170001 chrX_16170001 RAL-109_125b 4200 chrX 16222742 16222805 chrX 16231142 16231205 roo 17 8399 0.0 5.5 2.8 4.5 8463 chrX 16222742 intergenic not near genes chrX 16226974 intergenic not near genes chrX 16231205 intergenic not near genes chrX_17_16225001 chrX_16225001 RAL-109_125b 4201 chrX 16253828 16253857 chrX 16253965 16253974 8 132 0.0 7.5 3.8 1.7 146 chrX 16253828 intergenic snRNA:U5:14B - chrX 16253901 intergenic snRNA:U5:14B - chrX 16253974 intergenic snRNA:U5:14B - chrX_8_16250001 chrX_16250001 RAL-109_125b 4202 chrX 16255020 16255050 chrX 16255152 16255182 INE-1 6 132 4.0 4.5 4.2 1.2 162 chrX 16255020 intergenic snRNA:U2:14B + chrX 16255101 intergenic snRNA:U2:14B + chrX 16255182 intergenic snRNA:U2:14B + chrX_6_16255001 chrX_16255001 RAL-109_125b 4203 chrX 16295484 16295553 chrX 16295618 16295681 12 132 3.0 0.0 1.5 4.8 197 chrX 16295484 intron CG9911 - chrX 16295582 intron CG9911 - chrX 16295681 intron CG9911 - chrX_12_16295001 chrX_16295001 RAL-109_125b 4204 chrX 16329359 16329445 chrX 16329505 16329558 11 141 0.0 6.5 3.2 2.6 199 chrX 16329359 exon CG9919 - chrX 16329458 intron CG9919 - chrX 16329558 exon CG9919 - chrX_11_16325001 chrX_16325001 RAL-109_125b 4205 chrX 16340620 16340695 chrX 16349825 16349902 roo 20 9204 0.0 5.0 2.5 5.7 9282 chrX 16340620 3` UTR Dsp1 + chrX 16345261 intergenic not near genes chrX 16349902 intergenic sl + chrX_20_16345001 chrX_16345001 RAL-109_125b 4206 chrX 16492612 16492649 chrX 16498227 16498276 mdg3 7 5625 13.0 8.0 10.5 0.6 5664 chrX 16492612 intron para - chrX 16495444 intron para - chrX 16498276 exon para - chrX_7_16495001 chrX_16495001 RAL-109_125b 4207 chrX 16529369 16529375 chrX 16529533 16529544 4 168 4.5 9.5 7.0 0.5 175 chrX 16529369 intron para - chrX 16529456 intron para - chrX 16529544 intron para - chrX_4_16525001 chrX_16525001 RAL-109_125b 4208 chrX 16529378 16529440 chrX 16529532 16529591 5 154 0.0 9.5 4.8 0.9 213 chrX 16529378 intron para - chrX 16529484 intron para - chrX 16529591 intron para - chrX_5_16525001 chrX_16525001 RAL-109_125b 4209 chrX 16622246 16622293 chrX 16622374 16622421 6 128 2.0 7.5 4.8 1.0 175 chrX 16622246 intergenic not near genes chrX 16622334 intergenic not near genes chrX 16622421 intergenic not near genes chrX_6_16620001 chrX_16620001 RAL-109_125b 4210 chrX 16645681 16645699 chrX 16645806 16645824 4 122 11.5 7.5 9.5 0.4 143 chrX 16645681 intron mthl1 + chrX 16645752 intron mthl1 + chrX 16645824 intron mthl1 + chrX_4_16645001 chrX_16645001 RAL-109_125b 4211 chrX 16650888 16650958 chrX 16651015 16651087 8 128 6.0 4.5 5.2 1.3 199 chrX 16650888 intergenic CG32573 +,CG42512 + chrX 16650988 intergenic CG32573 +,CG42512 + chrX 16651087 intergenic CG32573 +,CG42512 + chrX_8_16650001 chrX_16650001 RAL-109_125b 4212 chrX 16689580 16689615 chrX 16689716 16689731 6 129 11.0 5.5 8.2 0.7 151 chrX 16689580 intron Sep4 - chrX 16689656 intron Sep4 - chrX 16689731 intron Sep4 - chrX_6_16685001 chrX_16685001 RAL-109_125b 4213 chrX 16689618 16689653 chrX 16689710 16689768 10 114 5.0 5.5 5.2 1.6 150 chrX 16689618 intron Sep4 - chrX 16689693 intron Sep4 - chrX 16689768 intron Sep4 - chrX_10_16685001 chrX_16685001 RAL-109_125b 4214 chrX 16698003 16698018 chrX 16698147 16698164 5 146 9.0 0.0 4.5 0.9 161 chrX 16698003 intron CG4678 + chrX 16698084 intron CG4678 + chrX 16698164 intron CG4678 + chrX_5_16695001 chrX_16695001 RAL-109_125b 4215 chrX 16707957 16707971 chrX 16708141 16708155 4 184 0.0 4.5 2.2 1.2 198 chrX 16707957 intron CG4678 + chrX 16708056 intron CG4678 + chrX 16708155 intron CG4678 + chrX_4_16705001 chrX_16705001 RAL-109_125b 4216 chrX 16764699 16764708 chrX 16764816 16764816 5 121 12.0 0.0 6.0 0.7 117 chrX 16764699 intron if - chrX 16764758 intron if - chrX 16764816 intron if - chrX_5_16760001 chrX_16760001 RAL-109_125b 4217 chrX 16785229 16785299 chrX 16785382 16785453 24 154 3.0 5.5 4.2 4.6 224 chrX 16785229 3` UTR CG9609 - chrX 16785341 3` UTR CG9609 - chrX 16785453 3` UTR CG9609 - chrX_24_16785001 chrX_16785001 RAL-109_125b 4218 chrX 16788771 16788847 chrX 16789000 16789076 9 226 4.5 3.5 4.0 1.8 305 chrX 16788771 3` UTR Sap30 + chrX 16788924 3` UTR Sap30 + chrX 16789076 3` UTR Sap30 + chrX_9_16785001 chrX_16785001 RAL-109_125b 4219 chrX 16821188 16821255 chrX 16821318 16821385 13 130 6.0 0.0 3.0 3.2 197 chrX 16821188 intron CG4829 + chrX 16821286 intron CG4829 + chrX 16821385 intron CG4829 + chrX_13_16820001 chrX_16820001 RAL-109_125b 4220 chrX 16870033 16870095 chrX 16870165 16870223 12 131 8.0 10.0 9.0 1.2 190 chrX 16870033 intron CG13003 - chrX 16870128 intron CG13003 - chrX 16870223 intron CG13003 - chrX_12_16870001 chrX_16870001 RAL-109_125b 4221 chrX 16891316 16891349 chrX 16891453 16891486 6 137 9.5 9.0 9.2 0.6 170 chrX 16891316 intergenic not near genes chrX 16891401 intergenic not near genes chrX 16891486 intergenic not near genes chrX_6_16890001 chrX_16890001 RAL-109_125b 4222 chrX 16935967 16936025 chrX 16936435 16936493 jockey 16 465 6.0 5.0 5.5 2.5 526 chrX 16935967 intron CG4928 + chrX 16936230 intron CG4928 + chrX 16936493 intron CG4928 + chrX_16_16935001 chrX_16935001 RAL-109_125b 4223 chrX 1053117 1053123 chrX 16983076 16983076 6 15929957 21.5 20.0 20.8 0.3 15929959 chrX 1053117 intron CR44779 + chrX 9018096 intron,intron rdgA +,CR43836 - chrX 16983076 intron CG45002 - chrX_6_9015001 chrX_9015001 RAL-109_125b 4224 chrX 1053118 1053123 chrX 16983077 16983077 5 15929958 21.5 20.0 20.8 0.2 15929959 chrX 1053118 intron CR44779 + chrX 9018098 intron,intron rdgA +,CR43836 - chrX 16983077 intron CG45002 - chrX_5_9015001 chrX_9015001 RAL-109_125b 4225 chrX 17011922 17011946 chrX 17012054 17012079 15 131 22.0 17.0 19.5 0.7 157 chrX 17011922 intron CG45002 - chrX 17012000 intron CG45002 - chrX 17012079 intron CG45002 - chrX_15_17010001 chrX_17010001 RAL-109_125b 4226 chrX 17011949 17011990 chrX 17012050 17012123 26 123 11.0 15.0 13.0 1.9 174 chrX 17011949 intron CG45002 - chrX 17012036 intron CG45002 - chrX 17012123 intron CG45002 - chrX_26_17010001 chrX_17010001 RAL-109_125b 4227 chrX 17011553 17011623 chrX 17014627 17014697 20 3075 43.0 18.5 30.8 0.6 3144 chrX 17011553 intron CG45002 - chrX 17013125 intron CG45002 - chrX 17014697 intron CG45002 - chrX_20_17010001 chrX_17010001 RAL-109_125b 4228 chrX 17057900 17057950 chrX 17058191 17058225 pogo 7 289 2.5 7.5 5.0 1.2 325 chrX 17057900 intron CG45002 - chrX 17058062 intron CG45002 - chrX 17058225 intron CG45002 - chrX_7_17055001 chrX_17055001 RAL-109_125b 4229 chrX 17061521 17061600 chrX 17061694 17061748 22 168 2.5 3.5 3.0 5.5 227 chrX 17061521 intron CG45002 - chrX 17061634 intron CG45002 - chrX 17061748 intron CG45002 - chrX_22_17060001 chrX_17060001 RAL-109_125b 4230 chrX 17122602 17122659 chrX 17122734 17122800 13 125 7.0 5.0 6.0 1.9 198 chrX 17122602 intron CG5004 + chrX 17122701 intron CG5004 + chrX 17122800 intron CG5004 + chrX_13_17120001 chrX_17120001 RAL-109_125b 4231 chrX 17195161 17195222 chrX 17200297 17200358 flea 18 5135 7.5 9.5 8.5 1.9 5197 chrX 17195161 3` UTR baz + chrX 17197760 3` UTR baz + chrX 17200358 3` UTR baz + chrX_18_17195001 chrX_17195001 RAL-109_125b 4232 chrX 17205798 17205857 chrX 17205938 17205997 19 139 3.0 10.0 6.5 2.5 199 chrX 17205798 intergenic not near genes chrX 17205898 intergenic not near genes chrX 17205997 intergenic CG32564 + chrX_19_17205001 chrX_17205001 RAL-109_125b 4233 chrX 17229908 17229965 chrX 17230061 17230116 24 149 7.5 4.0 5.8 3.5 208 chrX 17229908 intergenic CG10597 - chrX 17230012 intergenic CG10597 - chrX 17230116 intergenic CG10597 - chrX_24_17230001 chrX_17230001 RAL-109_125b 4234 chrX 17237484 17237533 chrX 17237618 17237655 4 131 5.0 5.5 5.2 0.6 171 chrX 17237484 intron f + chrX 17237570 intron f + chrX 17237655 intron f + chrX_4_17235001 chrX_17235001 RAL-109_125b 4235 chrX 17273805 17273840 chrX 17273946 17273981 21 138 4.0 5.0 4.5 3.8 176 chrX 17273805 exon f + chrX 17273893 intron f + chrX 17273981 intron f + chrX_21_17270001 chrX_17270001 RAL-109_125b 4236 chrX 17290022 17290029 chrX 17290148 17290155 4 126 14.0 6.0 10.0 0.4 133 chrX 17290022 intron,intron CG5445 +,Fim - chrX 17290088 intron,intron CG5445 +,Fim - chrX 17290155 intron,intron CG5445 +,Fim - chrX_4_17290001 chrX_17290001 RAL-109_125b 4237 chrX 17290030 17290083 chrX 17290146 17290209 14 125 9.5 6.5 8.0 1.6 179 chrX 17290030 intron,intron CG5445 +,Fim - chrX 17290120 intron,intron CG5445 +,Fim - chrX 17290209 intron,intron CG5445 +,Fim - chrX_14_17290001 chrX_17290001 RAL-109_125b 4238 chrX 17357490 17357518 chrX 17357634 17357662 12 144 12.5 4.0 8.2 1.3 172 chrX 17357490 intergenic not near genes chrX 17357576 intergenic not near genes chrX 17357662 intergenic not near genes chrX_12_17355001 chrX_17355001 RAL-109_125b 4239 chrX 17431311 17431332 chrX 17431702 17431708 jockey 9 389 14.0 7.0 10.5 0.8 397 chrX 17431311 intron CG12994 - chrX 17431510 intron CG12994 - chrX 17431708 intron CG12994 - chrX_9_17430001 chrX_17430001 RAL-109_125b 4240 chrX 17435710 17435778 chrX 17435836 17435904 19 123 8.0 9.5 8.8 1.9 194 chrX 17435710 intron CG12994 - chrX 17435807 intron CG12994 - chrX 17435904 intron CG12994 - chrX_19_17435001 chrX_17435001 RAL-109_125b 4241 chrX 17443076 17443105 chrX 17443250 17443279 7 174 5.5 4.0 4.8 1.2 203 chrX 17443076 intron CG12994 - chrX 17443178 intron CG12994 - chrX 17443279 intron CG12994 - chrX_7_17440001 chrX_17440001 RAL-109_125b 4242 chrX 17544964 17545017 chrX 17545096 17545114 12 127 11.0 4.0 7.5 1.4 150 chrX 17544964 intron CG43658 - chrX 17545039 intron CG43658 - chrX 17545114 intron CG43658 - chrX_12_17545001 chrX_17545001 RAL-109_125b 4243 chrX 17546920 17546997 chrX 17547103 17547180 12 183 0.0 4.5 2.2 3.8 260 chrX 17546920 intron CG43658 - chrX 17547050 intron CG43658 - chrX 17547180 intron CG43658 - chrX_12_17545001 chrX_17545001 RAL-109_125b 4244 chrX 17680878 17680917 chrX 17680983 17681039 15 121 8.5 7.0 7.8 1.7 161 chrX 17680878 intron chas - chrX 17680958 intron chas - chrX 17681039 intron chas - chrX_15_17680001 chrX_17680001 RAL-109_125b 4245 chrX 17716543 17716601 chrX 17716680 17716735 10 131 3.0 8.0 5.5 1.5 192 chrX 17716543 intron CG42684 + chrX 17716639 intron CG42684 + chrX 17716735 intron CG42684 + chrX_10_17715001 chrX_17715001 RAL-109_125b 4246 chrX 17759633 17759661 chrX 17759762 17759790 6 123 9.5 8.5 9.0 0.6 157 chrX 17759633 intergenic not near genes chrX 17759712 intergenic not near genes chrX 17759790 intergenic not near genes chrX_6_17755001 chrX_17755001 RAL-109_125b 4247 chrX 17792909 17792964 chrX 17796256 17796312 flea 14 3348 7.5 6.5 7.0 1.8 3403 chrX 17792909 intron OdsH + chrX 17794610 intron OdsH + chrX 17796312 intron OdsH + chrX_14_17790001 chrX_17790001 RAL-109_125b 4248 chrX 17792968 17792970 chrX 17796255 17796318 flea 4 3333 5.5 6.5 6.0 0.6 3350 chrX 17792968 intron OdsH + chrX 17794643 intron OdsH + chrX 17796318 intron OdsH + chrX_4_17790001 chrX_17790001 RAL-109_125b 4249 chrX 17803690 17803761 chrX 17803860 17803930 16 169 6.0 7.5 6.8 2.1 240 chrX 17803690 intron OdsH + chrX 17803810 intron OdsH + chrX 17803930 intron OdsH + chrX_16_17800001 chrX_17800001 RAL-109_125b 4250 chrX 17837368 17837377 chrX 17837464 17837500 6 109 1.0 16.5 8.8 0.6 132 chrX 17837368 intron CG6398 + chrX 17837434 intron CG6398 + chrX 17837500 intron CG6398 + chrX_6_17835001 chrX_17835001 RAL-109_125b 4251 chrX 17911807 17911874 chrX 17911943 17912011 15 136 1.5 2.5 2.0 5.0 204 chrX 17911807 intron CG6847 + chrX 17911909 intron CG6847 + chrX 17912011 intron CG6847 + chrX_15_17910001 chrX_17910001 RAL-109_125b 4252 chrX 17968855 17968917 chrX 17969024 17969085 14 168 3.5 8.0 5.8 2.1 230 chrX 17968855 intron Sh - chrX 17968970 intron Sh - chrX 17969085 intron Sh - chrX_14_17965001 chrX_17965001 RAL-109_125b 4253 chrX 17978292 17978577 chrX 17978419 17978635 16 110 5.0 5.5 5.2 2.6 343 chrX 17978292 intron Sh - chrX 17978464 intron Sh - chrX 17978635 intron Sh - chrX_16_17975001 chrX_17975001 RAL-109_125b 4254 chrX 18020771 18020821 chrX 18020908 18020958 14 137 11.5 2.0 6.8 1.8 187 chrX 18020771 intron Sh - chrX 18020864 intron Sh - chrX 18020958 intron Sh - chrX_14_18020001 chrX_18020001 RAL-109_125b 4255 chrX 18029143 18029185 chrX 18029274 18029300 12 127 5.0 0.0 2.5 3.4 157 chrX 18029143 intron Sh - chrX 18029222 intron Sh - chrX 18029300 intron Sh - chrX_12_18025001 chrX_18025001 RAL-109_125b 4256 chrX 18048725 18048804 chrX 18048892 18048973 15 165 7.5 9.0 8.2 1.6 248 chrX 18048725 intron Sh - chrX 18048849 intron Sh - chrX 18048973 intron Sh - chrX_15_18045001 chrX_18045001 RAL-109_125b 4257 chrX 18148588 18148624 chrX 18148741 18148766 20 152 2.5 2.5 2.5 5.7 178 chrX 18148588 intergenic not near genes chrX 18148677 intergenic not near genes chrX 18148766 intergenic not near genes chrX_20_18145001 chrX_18145001 RAL-109_125b 4258 chrX 18161947 18161953 chrX 18162066 18162083 4 127 7.5 13.5 10.5 0.3 136 chrX 18161947 intron Frq1 + chrX 18162015 intron Frq1 + chrX 18162083 intron Frq1 + chrX_4_18160001 chrX_18160001 RAL-109_125b 4259 chrX 18175456 18175473 chrX 18175591 18175608 6 135 0.0 6.5 3.2 1.4 152 chrX 18175456 intergenic not near genes chrX 18175532 intergenic not near genes chrX 18175608 intergenic not near genes chrX_6_18175001 chrX_18175001 RAL-109_125b 4260 chrX 18218010 18218062 chrX 18218177 18218229 13 167 6.0 8.0 7.0 1.6 219 chrX 18218010 intron CG33639 - chrX 18218120 intron CG33639 - chrX 18218229 intron CG33639 - chrX_13_18215001 chrX_18215001 RAL-109_125b 4261 chrX 18230524 18230579 chrX 18235183 18235228 13 4647 33.5 33.5 33.5 0.4 4704 chrX 18230524 intergenic not near genes chrX 18232876 intergenic not near genes chrX 18235228 intergenic not near genes chrX_13_18230001 chrX_18230001 RAL-109_125b 4262 chrX 18245658 18245701 chrX 18246033 18246086 15 382 8.0 4.5 6.2 2.1 428 chrX 18245658 intergenic CR45607 - chrX 18245872 intergenic not near genes chrX 18246086 intergenic not near genes chrX_15_18245001 chrX_18245001 RAL-109_125b 4263 chrX 18245702 18245725 chrX 18246030 18246103 11 364 5.5 4.5 5.0 1.8 401 chrX 18245702 intergenic not near genes chrX 18245902 intergenic not near genes chrX 18246103 intergenic not near genes chrX_11_18245001 chrX_18245001 RAL-109_125b 4264 chrX 18278235 18278255 chrX 18278374 18278394 5 139 11.0 10.5 10.8 0.4 159 chrX 18278235 intron upd3 + chrX 18278314 intron upd3 + chrX 18278394 intron upd3 + chrX_5_18275001 chrX_18275001 RAL-109_125b 4265 chrX 18320439 18320502 chrX 18320621 18320684 14 181 0.5 4.0 2.2 4.4 245 chrX 18320439 intron CG6023 - chrX 18320562 intron CG6023 - chrX 18320684 intron CG6023 - chrX_14_18320001 chrX_18320001 RAL-109_125b 4266 chrX 18349961 18350031 chrX 18350096 18350151 24 132 5.0 8.0 6.5 3.2 190 chrX 18349961 intron CG6123 - chrX 18350056 intron CG6123 - chrX 18350151 intron CG6123 - chrX_24_18350001 chrX_18350001 RAL-109_125b 4267 chrX 18362936 18362945 chrX 18363063 18363072 5 127 0.0 5.0 2.5 1.4 136 chrX 18362936 intergenic CG6106 + chrX 18363004 intergenic CG6106 + chrX 18363072 intergenic not near genes chrX_5_18360001 chrX_18360001 RAL-109_125b 4268 chrX 18429449 18429515 chrX 18434810 18434876 Transpac 20 5361 6.0 9.5 7.8 2.3 5427 chrX 18429449 intergenic not near genes chrX 18432162 intergenic not near genes chrX 18434876 intergenic not near genes chrX_20_18430001 chrX_18430001 RAL-109_125b 4269 chrX 18467184 18467255 chrX 18467395 18467469 16 212 8.0 9.0 8.5 1.7 285 chrX 18467184 intron CG32547 - chrX 18467326 intron CG32547 - chrX 18467469 intron CG32547 - chrX_16_18465001 chrX_18465001 RAL-109_125b 4270 chrX 18486070 18486131 chrX 18486202 18486270 21 131 10.0 11.5 10.8 1.8 200 chrX 18486070 exon psh - chrX 18486170 intron psh - chrX 18486270 intron psh - chrX_21_18485001 chrX_18485001 RAL-109_125b 4271 chrX 18490011 18490055 chrX 18490216 18490260 10 201 3.5 5.0 4.2 1.9 249 chrX 18490011 intergenic CG15046 - chrX 18490136 intergenic not near genes chrX 18490260 intergenic not near genes chrX_10_18490001 chrX_18490001 RAL-109_125b 4272 chrX 18555337 18555352 chrX 18556908 18556923 transib2 5 1569 7.0 7.0 7.0 0.6 1586 chrX 18555337 intron Bx + chrX 18556130 intron Bx + chrX 18556923 intron Bx + chrX_5_18555001 chrX_18555001 RAL-109_125b 4273 chrX 18555354 18555400 chrX 18556905 18556972 transib2 13 1567 4.5 6.5 5.5 2.0 1618 chrX 18555354 intron Bx + chrX 18556163 intron Bx + chrX 18556972 intron Bx + chrX_13_18555001 chrX_18555001 RAL-109_125b 4274 chrX 18558755 18558793 chrX 18558887 18558925 13 132 0.0 6.0 3.0 3.2 170 chrX 18558755 intron Bx + chrX 18558840 intron Bx + chrX 18558925 intron Bx + chrX_13_18555001 chrX_18555001 RAL-109_125b 4275 chrX 18558801 18558807 chrX 18558881 18558939 6 114 0.0 5.5 2.8 1.6 138 chrX 18558801 intron Bx + chrX 18558870 intron Bx + chrX 18558939 intron Bx + chrX_6_18555001 chrX_18555001 RAL-109_125b 4276 chrX 12946233 12946234 chrX 18572523 18572526 8 5626290 27.5 28.0 27.8 0.3 5626293 chrX 12946233 3` UTR fne + chrX 15759380 intron Graf - chrX 18572526 intergenic not near genes chrX_8_15755001 chrX_15755001 RAL-109_125b 4277 chrX 18576079 18576096 chrX 18576207 18576224 11 127 4.0 3.0 3.5 2.4 145 chrX 18576079 intergenic not near genes chrX 18576152 intergenic not near genes chrX 18576224 intergenic not near genes chrX_11_18575001 chrX_18575001 RAL-109_125b 4278 chrX 18644972 18644996 chrX 18645120 18645120 7 143 14.5 6.5 10.5 0.6 148 chrX 18644972 intron Rip11 - chrX 18645046 intron Rip11 - chrX 18645120 intron Rip11 - chrX_7_18645001 chrX_18645001 RAL-109_125b 4279 chrX 18645000 18645039 chrX 18645113 18645187 25 142 8.5 5.0 6.8 3.2 187 chrX 18645000 intron Rip11 - chrX 18645094 intron Rip11 - chrX 18645187 intron Rip11 - chrX_25_18645001 chrX_18645001 RAL-109_125b 4280 chrX 18698815 18698878 chrX 18698972 18699045 19 165 6.0 5.0 5.5 2.9 230 chrX 18698815 intergenic not near genes chrX 18698930 intergenic not near genes chrX 18699045 intergenic not near genes chrX_19_18695001 chrX_18695001 RAL-109_125b 4281 chrX 18754319 18754331 chrX 18758017 18758040 297 4 3707 5.0 8.5 6.8 0.5 3721 chrX 18754319 intergenic not near genes chrX 18756180 intergenic not near genes chrX 18758040 intergenic not near genes chrX_4_18755001 chrX_18755001 RAL-109_125b 4282 chrX 18779475 18779486 chrX 18779621 18779628 5 147 14.5 9.5 12.0 0.4 153 chrX 18779475 intron CG6891 + chrX 18779552 intron CG6891 + chrX 18779628 intron CG6891 + chrX_5_18775001 chrX_18775001 RAL-109_125b 4283 chrX 18779489 18779521 chrX 18779619 18779672 9 147 10.5 9.5 10.0 0.8 183 chrX 18779489 intron CG6891 + chrX 18779580 intron CG6891 + chrX 18779672 intron CG6891 + chrX_9_18775001 chrX_18775001 RAL-109_125b 4284 chrX 18832222 18832291 chrX 18832364 18832433 16 142 4.0 6.5 5.2 2.6 211 chrX 18832222 intergenic CG7101 +,Pvf1 + chrX 18832328 intergenic CG7101 +,Pvf1 + chrX 18832433 intergenic Pvf1 +,CG7101 + chrX_16_18830001 chrX_18830001 RAL-109_125b 4285 chrX 18883535 18883545 chrX 18883669 18883679 5 134 12.5 6.0 9.2 0.5 144 chrX 18883535 3` UTR CG34401 + chrX 18883607 3` UTR CG34401 + chrX 18883679 3` UTR CG34401 + chrX_5_18880001 chrX_18880001 RAL-109_125b 4286 chrX 18883549 18883593 chrX 18883668 18883726 13 132 4.5 5.5 5.0 2.2 177 chrX 18883549 3` UTR CG34401 + chrX 18883638 3` UTR CG34401 + chrX 18883726 3` UTR CG34401 + chrX_13_18880001 chrX_18880001 RAL-109_125b 4287 chrX 18896481 18896546 chrX 18896642 18896707 20 157 3.5 6.5 5.0 3.3 226 chrX 18896481 3` UTR CG7349 + chrX 18896594 intergenic CG7349 + chrX 18896707 intergenic CG7349 + chrX_20_18895001 chrX_18895001 RAL-109_125b 4288 chrX 18926500 18926507 chrX 18926642 18926649 5 142 4.5 0.0 2.2 1.6 149 chrX 18926500 intergenic not near genes chrX 18926574 intergenic not near genes chrX 18926649 intergenic not near genes chrX_5_18925001 chrX_18925001 RAL-109_125b 4289 chrX 18927592 18927610 chrX 18927718 18927736 7 126 10.0 6.5 8.2 0.8 144 chrX 18927592 intergenic not near genes chrX 18927664 intergenic not near genes chrX 18927736 intergenic not near genes chrX_7_18925001 chrX_18925001 RAL-109_125b 4290 chrX 18946147 18946177 chrX 18946284 18946314 8 137 2.5 3.5 3.0 2.0 167 chrX 18946147 intron CG43759 + chrX 18946230 intron CG43759 + chrX 18946314 intron CG43759 + chrX_8_18945001 chrX_18945001 RAL-109_125b 4291 chrX 18947459 18947521 chrX 18947602 18947664 18 143 6.0 4.0 5.0 3.0 205 chrX 18947459 intron CG43759 + chrX 18947562 intron CG43759 + chrX 18947664 intron CG43759 + chrX_18_18945001 chrX_18945001 RAL-109_125b 4292 chrX 18957026 18957092 chrX 18965739 18965805 roo 9 8713 5.5 3.5 4.5 1.6 8779 chrX 18957026 intron CG43759 + chrX 18961416 intron CG43759 + chrX 18965805 intron CG43759 + chrX_9_18960001 chrX_18960001 RAL-109_125b 4293 chrX 19025239 19025306 chrX 19025374 19025441 29 133 6.5 9.0 7.8 3.3 202 chrX 19025239 intron CG43759 + chrX 19025340 intron CG43759 + chrX 19025441 intron CG43759 + chrX_29_19025001 chrX_19025001 RAL-109_125b 4294 chrX 19060369 19060428 chrX 19065203 19065262 Doc 11 4834 7.0 11.5 9.2 1.1 4893 chrX 19060369 intron CG14190 + chrX 19062816 intron CG14190 + chrX 19065262 intron CG14190 + chrX_11_19060001 chrX_19060001 RAL-109_125b 4295 chrX 19073636 19073691 chrX 19073773 19073828 22 137 9.0 4.5 6.8 2.8 192 chrX 19073636 intergenic not near genes chrX 19073732 intergenic not near genes chrX 19073828 intergenic not near genes chrX_22_19070001 chrX_19070001 RAL-109_125b 4296 chrX 19098706 19098761 chrX 19098850 19098905 7 144 0.5 5.5 3.0 1.8 199 chrX 19098706 intergenic not near genes chrX 19098806 intergenic not near genes chrX 19098905 intergenic not near genes chrX_7_19095001 chrX_19095001 RAL-109_125b 4297 chrX 19124386 19124463 chrX 19124524 19124589 11 131 3.5 5.0 4.2 2.1 203 chrX 19124386 5` UTR CG15882 - chrX 19124488 intergenic CG15882 - chrX 19124589 intergenic CG15882 -,tgy - chrX_11_19120001 chrX_19120001 RAL-109_125b 4298 chrX 19125640 19125694 chrX 19125766 19125798 17 130 7.5 9.5 8.5 1.8 158 chrX 19125640 exon tgy - chrX 19125719 intron tgy - chrX 19125798 intron tgy - chrX_17_19125001 chrX_19125001 RAL-109_125b 4299 chrX 19136512 19136567 chrX 19143482 19143537 412 13 6963 14.0 1.5 7.8 1.5 7025 chrX 19136512 intergenic not near genes chrX 19140024 intergenic not near genes chrX 19143537 3` UTR RhoGAP18B - chrX_13_19140001 chrX_19140001 RAL-109_125b 4300 chrX 19176162 19176233 chrX 19176296 19176367 26 132 6.5 4.5 5.5 4.0 205 chrX 19176162 3` UTR CG7556 - chrX 19176264 3` UTR CG7556 - chrX 19176367 3` UTR CG7556 - chrX_26_19175001 chrX_19175001 RAL-109_125b 4301 chrX 19339732 19339746 chrX 19339858 19339872 5 126 8.5 5.5 7.0 0.6 140 chrX 19339732 intron nAChRalpha7 - chrX 19339802 intron nAChRalpha7 - chrX 19339872 intron nAChRalpha7 - chrX_5_19335001 chrX_19335001 RAL-109_125b 4302 chrX 19340357 19340403 chrX 19340482 19340534 11 132 11.5 11.5 11.5 0.9 177 chrX 19340357 intron nAChRalpha7 - chrX 19340446 intron nAChRalpha7 - chrX 19340534 exon nAChRalpha7 - chrX_11_19340001 chrX_19340001 RAL-109_125b 4303 chrX 19356952 19357021 chrX 19358443 19358530 NOF 16 1506 8.0 0.0 4.0 3.2 1578 chrX 19356952 intron kek5 + chrX 19357741 intron kek5 + chrX 19358530 intron kek5 + chrX_16_19355001 chrX_19355001 RAL-109_125b 4304 chrX 19380123 19380175 chrX 19380414 19380456 pogo 16 290 9.5 11.0 10.2 1.4 333 chrX 19380123 intron kek5 + chrX 19380290 intron kek5 + chrX 19380456 intron kek5 + chrX_16_19380001 chrX_19380001 RAL-109_125b 4305 chrX 19472085 19472155 chrX 19472706 19472749 jockey 7 611 6.0 7.0 6.5 0.9 664 chrX 19472085 intergenic kek5 + chrX 19472417 intergenic not near genes chrX 19472749 intergenic not near genes chrX_7_19470001 chrX_19470001 RAL-109_125b 4306 chrX 19541386 19541391 chrX 19541516 19541521 5 130 12.5 6.5 9.5 0.5 135 chrX 19541386 intron CG32532 - chrX 19541454 intron CG32532 - chrX 19541521 intron CG32532 - chrX_5_19540001 chrX_19540001 RAL-109_125b 4307 chrX 19541393 19541447 chrX 19541510 19541577 15 129 3.5 5.5 4.5 2.7 184 chrX 19541393 intron CG32532 - chrX 19541485 intron CG32532 - chrX 19541577 intron CG32532 - chrX_15_19540001 chrX_19540001 RAL-109_125b 4308 chrX 19542089 19542140 chrX 19542237 19542288 19 148 11.0 0.0 5.5 2.9 199 chrX 19542089 intron CG32532 - chrX 19542188 intron CG32532 - chrX 19542288 intron CG32532 - chrX_19_19540001 chrX_19540001 RAL-109_125b 4309 chrX 19576514 19576592 chrX 19576642 19576674 26 121 6.0 5.5 5.8 3.8 160 chrX 19576514 intron Tao - chrX 19576594 intron Tao - chrX 19576674 intron Tao - chrX_26_19575001 chrX_19575001 RAL-109_125b 4310 chrX 19593901 19593972 chrX 19594036 19594107 31 132 4.0 3.0 3.5 6.9 206 chrX 19593901 exon CG14205 + chrX 19594004 intron CG14205 + chrX 19594107 exon CG14205 + chrX_31_19590001 chrX_19590001 RAL-109_125b 4311 chrX 19595683 19595744 chrX 19595822 19595883 23 136 5.0 0.0 2.5 6.6 200 chrX 19595683 intergenic CG14205 + chrX 19595783 intergenic CG14205 + chrX 19595883 intergenic CG14205 + chrX_23_19595001 chrX_19595001 RAL-109_125b 4312 chrX 19674165 19674240 chrX 19674298 19674373 23 130 11.5 10.0 10.8 1.9 208 chrX 19674165 intron et - chrX 19674269 intron et - chrX 19674373 intron et - chrX_23_19670001 chrX_19670001 RAL-109_125b 4313 chrX 19689359 19689431 chrX 19689487 19689559 17 128 6.5 8.0 7.2 2.1 200 chrX 19689359 intergenic Mer -,CG14227 - chrX 19689459 intergenic Mer - chrX 19689559 intergenic Mer - chrX_17_19685001 chrX_19685001 RAL-109_125b 4314 chrX 19729569 19729615 chrX 19729702 19729727 17 129 12.5 1.0 6.8 2.2 158 chrX 19729569 3` UTR CG12531 + chrX 19729648 3` UTR CG12531 + chrX 19729727 3` UTR CG12531 + chrX_17_19725001 chrX_19725001 RAL-109_125b 4315 chrX 19797305 19797335 chrX 19804667 19804698 Stalker4 8 7362 13.5 9.5 11.5 0.6 7393 chrX 19797305 intergenic not near genes chrX 19801002 intergenic not near genes chrX 19804698 intergenic not near genes chrX_8_19800001 chrX_19800001 RAL-109_125b 4316 chrX 19817432 19817498 chrX 19817578 19817645 12 147 5.5 8.0 6.8 1.5 213 chrX 19817432 intergenic not near genes chrX 19817538 intergenic not near genes chrX 19817645 intergenic not near genes chrX_12_19815001 chrX_19815001 RAL-109_125b 4317 chrX 19821709 19821744 chrX 19821850 19821881 6 140 9.0 11.5 10.2 0.5 172 chrX 19821709 intergenic not near genes chrX 19821795 intergenic not near genes chrX 19821881 intergenic not near genes chrX_6_19820001 chrX_19820001 RAL-109_125b 4318 chrX 19822790 19822831 chrX 19823007 19823048 13 217 9.0 7.0 8.0 1.4 258 chrX 19822790 intergenic not near genes chrX 19822919 intergenic skpE - chrX 19823048 intergenic skpE - chrX_13_19820001 chrX_19820001 RAL-109_125b 4319 chrX 19822832 19822858 chrX 19822994 19823074 10 200 4.0 5.5 4.8 1.7 242 chrX 19822832 intergenic not near genes chrX 19822953 intergenic skpE - chrX 19823074 intergenic skpE - chrX_10_19820001 chrX_19820001 RAL-109_125b 4320 chrX 19855959 19855996 chrX 19856079 19856123 15 125 16.5 9.0 12.8 1.1 164 chrX 19855959 exon Nup205 + chrX 19856041 intron Nup205 + chrX 19856123 exon Nup205 + chrX_15_19855001 chrX_19855001 RAL-109_125b 4321 chrX 19881411 19881483 chrX 19881542 19881614 33 130 5.0 7.0 6.0 4.7 203 chrX 19881411 intron Hers + chrX 19881512 intron Hers + chrX 19881614 intron Hers + chrX_33_19880001 chrX_19880001 RAL-109_125b 4322 chrX 19884070 19884109 chrX 19884175 19884205 9 110 5.5 9.0 7.2 1.1 135 chrX 19884070 intron Hers + chrX 19884138 intron Hers + chrX 19884205 intron Hers + chrX_9_19880001 chrX_19880001 RAL-109_125b 4323 chrX 19897349 19897363 chrX 19897476 19897490 5 127 15.0 10.5 12.8 0.4 141 chrX 19897349 intron Hers + chrX 19897420 intron Hers + chrX 19897490 intron Hers + chrX_5_19895001 chrX_19895001 RAL-109_125b 4324 chrX 19897364 19897410 chrX 19897469 19897537 20 125 9.5 9.5 9.5 1.9 173 chrX 19897364 intron Hers + chrX 19897450 intron Hers + chrX 19897537 intron Hers + chrX_20_19895001 chrX_19895001 RAL-109_125b 4325 chrX 19983848 19983873 chrX 19983978 19984000 5 129 0.0 4.5 2.2 1.6 152 chrX 19983848 intergenic not near genes chrX 19983924 intergenic not near genes chrX 19984000 intergenic not near genes chrX_5_19980001 chrX_19980001 RAL-109_125b 4326 chrX 19992376 19992420 chrX 19992491 19992546 8 114 6.5 6.0 6.2 1.1 170 chrX 19992376 intergenic not near genes chrX 19992461 intergenic not near genes chrX 19992546 intergenic not near genes chrX_8_19990001 chrX_19990001 RAL-109_125b 4327 chrX 19992946 19992956 chrX 19993049 19993085 5 123 13.5 4.0 8.8 0.5 139 chrX 19992946 intergenic not near genes chrX 19993016 intergenic not near genes chrX 19993085 intergenic not near genes chrX_5_19990001 chrX_19990001 RAL-109_125b 4328 chrX 19992961 19992992 chrX 19993046 19993101 12 118 6.0 4.5 5.2 1.9 140 chrX 19992961 intergenic not near genes chrX 19993031 intergenic not near genes chrX 19993101 intergenic not near genes chrX_12_19990001 chrX_19990001 RAL-109_125b 4329 chrX 19993426 19993445 chrX 19993556 19993575 10 130 6.5 5.5 6.0 1.4 149 chrX 19993426 intergenic not near genes chrX 19993500 intergenic not near genes chrX 19993575 intergenic not near genes chrX_10_19990001 chrX_19990001 RAL-109_125b 4330 chrX 19997157 19997226 chrX 19997805 19997874 19 646 4.0 8.5 6.2 2.6 717 chrX 19997157 intergenic not near genes chrX 19997516 intergenic not near genes chrX 19997874 intergenic not near genes chrX_19_19995001 chrX_19995001 RAL-109_125b 4331 chrX 20041489 20041553 chrX 20041619 20041683 20 130 4.5 8.5 6.5 2.7 194 chrX 20041489 intron Dop2R - chrX 20041586 intron Dop2R - chrX 20041683 intron Dop2R - chrX_20_20040001 chrX_20040001 RAL-109_125b 4332 chrX 20132257 20132308 chrX 20132390 20132441 9 133 11.5 8.0 9.8 0.8 184 chrX 20132257 intergenic not near genes chrX 20132349 intergenic not near genes chrX 20132441 intergenic not near genes chrX_9_20130001 chrX_20130001 RAL-109_125b 4333 chrX 20144292 20144312 chrX 20144422 20144442 6 130 0.0 10.0 5.0 1.0 150 chrX 20144292 intergenic not near genes chrX 20144367 intergenic not near genes chrX 20144442 intergenic not near genes chrX_6_20140001 chrX_20140001 RAL-109_125b 4334 chrX 20263382 20263432 chrX 20263521 20263572 15 138 9.5 2.5 6.0 2.1 190 chrX 20263382 intergenic not near genes chrX 20263477 intergenic not near genes chrX 20263572 intergenic not near genes chrX_15_20260001 chrX_20260001 RAL-109_125b 4335 chrX 20271460 20271493 chrX 20271602 20271635 9 142 13.0 0.0 6.5 1.2 175 chrX 20271460 intergenic not near genes chrX 20271548 intergenic not near genes chrX 20271635 intergenic not near genes chrX_9_20270001 chrX_20270001 RAL-109_125b 4336 chrX 20279703 20279726 chrX 20279832 20279855 4 129 11.0 0.0 5.5 0.6 152 chrX 20279703 intergenic not near genes chrX 20279779 intergenic not near genes chrX 20279855 intergenic not near genes chrX_4_20275001 chrX_20275001 RAL-109_125b 4337 chrX 20312835 20312843 chrX 20312963 20312971 4 128 12.0 5.5 8.8 0.4 136 chrX 20312835 intron CG1504 - chrX 20312903 intron CG1504 - chrX 20312971 intron CG1504 - chrX_4_20310001 chrX_20310001 RAL-109_125b 4338 chrX 20312845 20312896 chrX 20312960 20313017 19 124 6.5 5.5 6.0 2.7 172 chrX 20312845 intron CG1504 - chrX 20312931 intron CG1504 - chrX 20313017 intron CG1504 - chrX_19_20310001 chrX_20310001 RAL-109_125b 4339 chrX 20320251 20320268 chrX 20320378 20320395 9 127 16.0 8.0 12.0 0.7 144 chrX 20320251 intron CG1504 - chrX 20320323 intron CG1504 - chrX 20320395 intron CG1504 - chrX_9_20320001 chrX_20320001 RAL-109_125b 4340 chrX 20320294 20320301 chrX 20320419 20320428 4 126 9.0 12.0 10.5 0.3 134 chrX 20320294 intron CG1504 - chrX 20320361 intron CG1504 - chrX 20320428 intron CG1504 - chrX_4_20320001 chrX_20320001 RAL-109_125b 4341 chrX 20369274 20369341 chrX 20369408 20369460 26 133 4.5 9.5 7.0 3.2 186 chrX 20369274 intergenic not near genes chrX 20369367 intergenic not near genes chrX 20369460 intergenic not near genes chrX_26_20365001 chrX_20365001 RAL-109_125b 4342 chrX 20415028 20415083 chrX 20415154 20415209 15 125 3.0 1.0 2.0 5.0 181 chrX 20415028 intergenic not near genes chrX 20415118 intergenic not near genes chrX 20415209 intergenic not near genes chrX_15_20415001 chrX_20415001 RAL-109_125b 4343 chrX 20427097 20427131 chrX 20427274 20427308 15 177 48.5 44.0 46.2 0.3 211 chrX 20427097 intergenic CG15456 -,CG11710 - chrX 20427202 intergenic CG15456 -,CG11710 - chrX 20427308 intergenic CG11710 -,CG15456 - chrX_15_20425001 chrX_20425001 RAL-109_125b 4344 chrX 20426178 20426205 chrX 20428340 20428407 38 2165 68.0 71.0 69.5 0.5 2229 chrX 20426178 exon cactin + chrX 20427292 intergenic CG11710 -,CG15456 - chrX 20428407 exon CG11710 - chrX_38_20425001 chrX_20425001 RAL-109_125b 4345 chrX 20457465 20457518 chrX 20457753 20457818 19 296 5.0 3.0 4.0 3.8 353 chrX 20457465 intron CG32506 + chrX 20457642 intron CG32506 + chrX 20457818 intron CG32506 + chrX_19_20455001 chrX_20455001 RAL-109_125b 4346 chrX 20459617 20459633 chrX 20459717 20459741 5 111 14.5 12.0 13.2 0.4 124 chrX 20459617 intron CG32506 + chrX 20459679 intron CG32506 + chrX 20459741 intron CG32506 + chrX_5_20455001 chrX_20455001 RAL-109_125b 4347 chrX 20459635 20459653 chrX 20459716 20459764 4 106 10.5 12.0 11.2 0.3 129 chrX 20459635 intron CG32506 + chrX 20459700 intron CG32506 + chrX 20459764 intron CG32506 + chrX_4_20455001 chrX_20455001 RAL-109_125b 4348 chrX 20459655 20459670 chrX 20459712 20459756 4 88 10.0 11.0 10.5 0.3 101 chrX 20459655 intron CG32506 + chrX 20459706 intron CG32506 + chrX 20459756 intron CG32506 + chrX_4_20455001 chrX_20455001 RAL-109_125b 4349 chrX 20467978 20468041 chrX 20468117 20468173 9 134 4.5 0.0 2.2 2.8 195 chrX 20467978 intron GstT3 + chrX 20468076 intron GstT3 + chrX 20468173 intron GstT3 + chrX_9_20465001 chrX_20465001 RAL-109_125b 4350 chrX 20493882 20493924 chrX 20494086 20494135 8 210 0.0 10.5 5.2 1.3 253 chrX 20493882 intron RhoGAP19D - chrX 20494008 intron RhoGAP19D - chrX 20494135 intron RhoGAP19D - chrX_8_20490001 chrX_20490001 RAL-109_125b 4351 chrX 20518740 20518798 chrX 20518864 20518919 22 123 3.0 11.0 7.0 2.8 179 chrX 20518740 intron Tak1 - chrX 20518830 intron Tak1 - chrX 20518919 intron Tak1 - chrX_22_20515001 chrX_20515001 RAL-109_125b 4352 chrX 20531644 20531712 chrX 20531784 20531844 10 137 0.0 6.5 3.2 2.4 200 chrX 20531644 intergenic not near genes chrX 20531744 intergenic not near genes chrX 20531844 intergenic not near genes chrX_10_20530001 chrX_20530001 RAL-109_125b 4353 chrX 20541276 20541327 chrX 20541453 20541500 13 173 6.0 0.0 3.0 3.2 224 chrX 20541276 intron RunxB + chrX 20541388 intron RunxB + chrX 20541500 intron RunxB + chrX_13_20540001 chrX_20540001 RAL-109_125b 4354 chrX 20546499 20546561 chrX 20546715 20546777 16 215 2.0 6.0 4.0 3.2 278 chrX 20546499 intron RunxB + chrX 20546638 intron RunxB + chrX 20546777 intron RunxB + chrX_16_20545001 chrX_20545001 RAL-109_125b 4355 chrX 20578034 20578107 chrX 20578163 20578236 18 127 7.0 7.5 7.2 2.2 202 chrX 20578034 intergenic not near genes chrX 20578135 intergenic not near genes chrX 20578236 intergenic not near genes chrX_18_20575001 chrX_20575001 RAL-109_125b 4356 chrX 20594256 20594331 chrX 20594392 20594442 17 128 4.5 6.5 5.5 2.6 186 chrX 20594256 intron RunxA - chrX 20594349 intron RunxA - chrX 20594442 intron RunxA - chrX_17_20590001 chrX_20590001 RAL-109_125b 4357 chrX 20635395 20635447 chrX 20635604 20635663 24 215 3.0 9.5 6.2 3.3 268 chrX 20635395 intergenic not near genes chrX 20635529 intergenic not near genes chrX 20635663 intergenic not near genes chrX_24_20635001 chrX_20635001 RAL-109_125b 4358 chrX 20662267 20662324 chrX 20662400 20662453 9 128 10.5 5.5 8.0 1.0 186 chrX 20662267 intron CG1835 + chrX 20662360 intron CG1835 + chrX 20662453 intron CG1835 + chrX_9_20660001 chrX_20660001 RAL-109_125b 4359 chrX 20763461 20763500 chrX 20763549 20763574 11 104 7.5 5.0 6.2 1.5 113 chrX 20763461 3` UTR shakB - chrX 20763518 3` UTR shakB - chrX 20763574 3` UTR shakB - chrX_11_20760001 chrX_20760001 RAL-109_125b 4360 chrX 20836677 20836749 chrX 20844329 20844401 roo 19 7651 3.0 6.0 4.5 3.5 7724 chrX 20836677 intron shakB - chrX 20840539 intron shakB - chrX 20844401 intron shakB - chrX_19_20840001 chrX_20840001 RAL-109_125b 4361 chrX 20915002 20915072 chrX 20915223 20915293 13 220 4.5 6.0 5.2 2.1 291 chrX 20915002 intron shakB - chrX 20915148 intron shakB - chrX 20915293 intron shakB - chrX_13_20915001 chrX_20915001 RAL-109_125b 4362 chrX 20940677 20940729 chrX 20942196 20942222 hobo 15 1516 10.5 2.5 6.5 2.0 1545 chrX 20940677 intergenic not near genes chrX 20941450 intergenic not near genes chrX 20942222 intergenic not near genes chrX_15_20940001 chrX_20940001 RAL-109_125b 4363 chrX 20948242 20948282 chrX 20948381 20948421 5 139 0.5 12.0 6.2 0.7 179 chrX 20948242 intergenic not near genes chrX 20948332 intergenic not near genes chrX 20948421 intergenic not near genes chrX_5_20945001 chrX_20945001 RAL-109_125b 4364 chrX 20956924 20957008 chrX 20962419 20962422 I-element 9 5484 0.0 3.5 1.8 3.2 5498 chrX 20956924 intergenic not near genes chrX 20959673 intergenic not near genes chrX 20962422 intergenic Ser6 - chrX_9_20955001 chrX_20955001 RAL-109_125b 4365 chrX 20974147 20974206 chrX 20974381 20974440 18 233 2.5 3.0 2.8 4.7 293 chrX 20974147 intergenic not near genes chrX 20974294 intergenic not near genes chrX 20974440 intergenic not near genes chrX_18_20970001 chrX_20970001 RAL-109_125b 4366 chrX 20980982 20981055 chrX 20981135 20981208 19 150 6.5 5.0 5.8 2.8 226 chrX 20980982 intergenic not near genes chrX 20981095 intergenic not near genes chrX 20981208 intergenic not near genes chrX_19_20980001 chrX_20980001 RAL-109_125b 4367 chrX 20991118 20991134 chrX 20991248 20991264 6 130 11.5 0.5 6.0 0.9 146 chrX 20991118 intergenic not near genes chrX 20991191 intergenic not near genes chrX 20991264 intergenic not near genes chrX_6_20990001 chrX_20990001 RAL-109_125b 4368 chrX 21022249 21022261 chrX 21022468 21022480 9 219 24.0 16.0 20.0 0.4 231 chrX 21022249 intergenic not near genes chrX 21022364 intergenic not near genes chrX 21022480 intergenic not near genes chrX_9_21020001 chrX_21020001 RAL-109_125b 4369 chrX 21028665 21028706 chrX 21028901 21028942 5 236 13.0 4.0 8.5 0.5 277 chrX 21028665 3` UTR CG1529 - chrX 21028804 3` UTR CG1529 - chrX 21028942 3` UTR CG1529 - chrX_5_21025001 chrX_21025001 RAL-109_125b 4370 chrX 21042561 21042630 chrX 21045302 21045365 23 2740 40.5 50.0 45.2 0.5 2804 chrX 21042561 exon Mgstl + chrX 21043963 exon,3` UTR Mgstl +,CR44431 - chrX 21045365 intron Cbs + chrX_23_21040001 chrX_21040001 RAL-109_125b 4371 chrX 21061818 21061890 chrX 21062358 21062426 roo 17 537 4.5 5.5 5.0 2.8 608 chrX 21061818 intron bves + chrX 21062122 intron bves + chrX 21062426 intron,3` UTR bves +,CG32512 - chrX_17_21060001 chrX_21060001 RAL-109_125b 4372 chrX 21084513 21084577 chrX 21085078 21085142 22 564 8.5 10.0 9.2 2.2 629 chrX 21084513 intergenic not near genes chrX 21084828 intergenic not near genes chrX 21085142 intergenic not near genes chrX_22_21080001 chrX_21080001 RAL-109_125b 4373 chrX 20144556 20144587 chrX 21085244 21085250 4 940669 14.0 32.0 23.0 0.2 940694 chrX 20144556 intergenic not near genes chrX 20614903 intron RunxA - chrX 21085250 intergenic not near genes chrX_4_20610001 chrX_20610001 RAL-109_125b 4374 chrX 21086092 21086151 chrX 21087161 21087230 jockey 17 1077 4.5 6.0 5.2 2.7 1138 chrX 21086092 intergenic not near genes chrX 21086661 intergenic not near genes chrX 21087230 intergenic not near genes chrX_17_21085001 chrX_21085001 RAL-109_125b 4375 chrX 21104827 21104903 chrX 21104959 21105028 22 122 7.0 7.0 7.0 2.8 201 chrX 21104827 intron,intron,3` UTR CG11566 +,stg1 +,CG1503 - chrX 21104928 intron,intron,3` UTR CG11566 +,stg1 +,CG1503 - chrX 21105028 intron,intron,exon CG11566 +,stg1 +,CG1503 - chrX_22_21100001 chrX_21100001 RAL-109_125b 4376 chrX 21166090 21166167 chrX 21166218 21166298 15 128 1.5 4.0 2.8 3.9 208 chrX 21166090 intergenic not near genes chrX 21166194 intergenic not near genes chrX 21166298 intergenic not near genes chrX_15_21165001 chrX_21165001 RAL-109_125b 4377 chrX 21166410 21166460 chrX 21166538 21166568 14 133 3.0 2.5 2.8 3.7 158 chrX 21166410 intergenic not near genes chrX 21166489 intergenic not near genes chrX 21166568 intergenic not near genes chrX_14_21165001 chrX_21165001 RAL-109_125b 4378 chrX 21188804 21188852 chrX 21188932 21188990 11 135 10.5 6.0 8.2 1.2 186 chrX 21188804 intergenic CR45506 + chrX 21188897 intergenic CR45506 + chrX 21188990 intergenic CR45506 + chrX_11_21185001 chrX_21185001 RAL-109_125b 4379 chrX 21188853 21188873 chrX 21188925 21189011 7 129 6.5 5.5 6.0 1.0 158 chrX 21188853 intergenic CR45506 + chrX 21188932 intergenic CR45506 + chrX 21189011 intergenic CR45506 + chrX_7_21185001 chrX_21185001 RAL-109_125b 4380 chrX 21190778 21190821 chrX 21190904 21190952 9 130 0.0 7.5 3.8 1.9 174 chrX 21190778 intergenic not near genes chrX 21190865 intergenic not near genes chrX 21190952 intergenic not near genes chrX_9_21190001 chrX_21190001 RAL-109_125b 4381 chrX 21328068 21328143 chrX 21328229 21328304 18 160 8.0 2.5 5.2 2.9 236 chrX 21328068 3` UTR CG1486 + chrX 21328186 intergenic CG1486 +,tty - chrX 21328304 intergenic CG1486 +,tty - chrX_18_21325001 chrX_21325001 RAL-109_125b 4382 chrX 21410435 21410457 chrX 21410568 21410580 4 130 4.5 0.0 2.2 1.2 145 chrX 21410435 intron CR45003 - chrX 21410508 3` UTR CR45003 - chrX 21410580 intergenic CR45003 - chrX_4_21410001 chrX_21410001 RAL-109_125b 4383 chrX 21428332 21428368 chrX 21428526 21428608 7 230 6.0 3.0 4.5 1.3 276 chrX 21428332 intron CG42343 - chrX 21428470 intron CG42343 - chrX 21428608 intron CG42343 - chrX_7_21425001 chrX_21425001 RAL-109_125b 4384 chrX 21454820 21454871 chrX 21454954 21455003 13 133 7.0 7.5 7.2 1.6 183 chrX 21454820 intron CG42343 - chrX 21454912 intron CG42343 - chrX 21455003 intron CG42343 - chrX_13_21450001 chrX_21450001 RAL-109_125b 4385 chrX 21455174 21455244 chrX 21455392 21455476 14 230 4.0 5.0 4.5 2.5 302 chrX 21455174 intron CG42343 - chrX 21455325 intron CG42343 - chrX 21455476 intron CG42343 - chrX_14_21455001 chrX_21455001 RAL-109_125b 4386 chrX 21458657 21458684 chrX 21464143 21464170 Ivk 12 5486 13.5 5.0 9.2 1.2 5513 chrX 21458657 intergenic not near genes chrX 21461414 intergenic not near genes chrX 21464170 intergenic not near genes chrX_12_21460001 chrX_21460001 RAL-109_125b 4387 chrX 21458687 21458726 chrX 21464134 21464212 Ivk 14 5479 6.0 2.5 4.2 2.7 5525 chrX 21458687 intergenic not near genes chrX 21461450 intergenic not near genes chrX 21464212 intergenic not near genes chrX_14_21460001 chrX_21460001 RAL-109_125b 4388 chrX 21464901 21464915 chrX 21465030 21465044 7 129 14.0 3.0 8.5 0.7 143 chrX 21464901 intergenic not near genes chrX 21464972 intergenic not near genes chrX 21465044 intergenic not near genes chrX_7_21460001 chrX_21460001 RAL-109_125b 4389 chrX 21464917 21464967 chrX 21465026 21465081 7 124 5.0 3.0 4.0 1.4 164 chrX 21464917 intergenic not near genes chrX 21464999 intergenic not near genes chrX 21465081 intergenic not near genes chrX_7_21460001 chrX_21460001 RAL-109_125b 4390 chrX 21466970 21467037 chrX 21467104 21467171 12 134 5.0 3.0 4.0 2.4 201 chrX 21466970 intergenic CR45507 - chrX 21467070 intergenic CR45507 - chrX 21467171 3` UTR CR45507 - chrX_12_21465001 chrX_21465001 RAL-109_125b 4391 chrX 21500515 21500589 chrX 21500766 21500840 6 244 4.5 7.0 5.8 0.9 325 chrX 21500515 intron CR45082 - chrX 21500678 intron CR45082 - chrX 21500840 intron CR45082 - chrX_6_21500001 chrX_21500001 RAL-109_125b 4392 chrX 21516944 21517018 chrX 21517065 21517140 22 127 7.5 7.0 7.2 2.7 196 chrX 21516944 intron CR45082 - chrX 21517042 intron CR45082 - chrX 21517140 intron CR45082 - chrX_22_21515001 chrX_21515001 RAL-109_125b 4393 chrX 21565394 21565436 chrX 21565522 21565564 6 123 4.5 5.5 5.0 1.0 170 chrX 21565394 intergenic not near genes chrX 21565479 intergenic not near genes chrX 21565564 intergenic not near genes chrX_6_21565001 chrX_21565001 RAL-109_125b 4394 chrX 21581507 21581556 chrX 21581638 21581687 13 131 2.5 0.0 1.2 5.9 180 chrX 21581507 intergenic not near genes chrX 21581597 intergenic not near genes chrX 21581687 intergenic not near genes chrX_13_21580001 chrX_21580001 RAL-109_125b 4395 chrX 21668220 21668284 chrX 21668355 21668419 14 135 26.0 26.0 26.0 0.5 199 chrX 21668220 intergenic not near genes chrX 21668320 intergenic not near genes chrX 21668419 intergenic not near genes chrX_14_21665001 chrX_21665001 RAL-109_125b 4396 chrX 22478874 22478898 chrX 22479051 22479081 9 180 0.0 20.0 10.0 0.8 207 chrX 22478874 intron CG12576 - chrX 22478978 intron CG12576 - chrX 22479081 intron CG12576 - chrX_9_22475001 chrX_22475001 RAL-109_125b 4397 chrX 22522586 22522648 chrX 22525456 22525458 NOF 13 2864 5.5 10.0 7.8 1.5 2872 chrX 22522586 intron CG17600 + chrX 22524022 intron CG17600 + chrX 22525458 intron CG17600 + chrX_13_22520001 chrX_22520001 RAL-109_125b 4398 chrX 22564568 22564570 chrX 22575093 22575149 jockey 7 10533 24.5 9.0 16.8 0.4 10581 chrX 22564568 intergenic not near genes chrX 22569858 intergenic not near genes chrX 22575149 intergenic not near genes chrX_7_22565001 chrX_22565001 RAL-109_125b 4399 chrX 22585462 22585522 chrX 22585595 22585656 8 132 5.0 1.0 3.0 2.0 194 chrX 22585462 intron Cda4 - chrX 22585559 intron Cda4 - chrX 22585656 intron Cda4 - chrX_8_22585001 chrX_22585001 RAL-109_125b 4400 chrX 22620451 22620490 chrX 22626765 22626804 297 6 6314 6.0 6.5 6.2 0.8 6353 chrX 22620451 intron Cda4 - chrX 22623628 intron Cda4 - chrX 22626804 intron Cda4 - chrX_6_22620001 chrX_22620001 RAL-109_125b 4401 chrX 22638578 22638634 chrX 22639416 22639425 20 833 0.0 0.0 0.0 20.0 847 chrX 22638578 intergenic not near genes chrX 22639002 intergenic not near genes chrX 22639425 intergenic not near genes chrX_20_22635001 chrX_22635001 RAL-109_125b 4402 chrX 22643090 22643142 chrX 22644044 22644108 15 962 4.0 6.5 5.2 2.4 1018 chrX 22643090 intergenic not near genes chrX 22643599 intergenic not near genes chrX 22644108 intergenic not near genes chrX_15_22640001 chrX_22640001 RAL-109_125b 4403 chrX 22660530 22660541 chrX 22660664 22660664 5 132 13.0 6.0 9.5 0.5 134 chrX 22660530 intron CR44997 + chrX 22660597 intron CR44997 + chrX 22660664 intron CR44997 + chrX_5_22660001 chrX_22660001 RAL-109_125b 4404 chrX 22660543 22660596 chrX 22660663 22660718 23 130 6.0 5.5 5.8 3.4 175 chrX 22660543 intron CR44997 + chrX 22660630 intron CR44997 + chrX 22660718 intron CR44997 + chrX_23_22660001 chrX_22660001 RAL-109_125b 4405 chrX 22697459 22697511 chrX 22701806 22701858 Juan 23 4346 8.0 7.0 7.5 2.7 4399 chrX 22697459 intron CR44997 + chrX 22699658 intron CR44997 + chrX 22701858 intron CR44997 + chrX_23_22695001 chrX_22695001 RAL-109_125b 4406 chrX 22771461 22771524 chrX 22774802 22774865 297 17 3338 7.0 5.0 6.0 2.4 3404 chrX 22771461 intron CR44997 + chrX 22773163 intron CR44997 + chrX 22774865 intron CR44997 + chrX_17_22770001 chrX_22770001 RAL-109_125b 4407 chrX 22796947 22797021 chrX 22797082 22797156 16 134 0.5 6.5 3.5 3.6 209 chrX 22796947 intron CR44997 + chrX 22797052 intron CR44997 + chrX 22797156 intron CR44997 + chrX_16_22795001 chrX_22795001 RAL-109_125b 4408 chrX 22811957 22811989 chrX 22816779 22816811 F-element 11 4819 6.0 7.0 6.5 1.5 4854 chrX 22811957 intergenic CG12446 - chrX 22814384 intergenic not near genes chrX 22816811 intergenic not near genes chrX_11_22810001 chrX_22810001 RAL-109_125b 4409 chrX 22824218 22824421 chrX 22824394 22824604 31 181 0.0 0.0 0.0 31.0 386 chrX 22824218 intergenic fog - chrX 22824411 3` UTR fog - chrX 22824604 3` UTR fog - chrX_31_22820001 chrX_22820001 RAL-109_125b 4410 chrX 22844497 22844526 chrX 22844634 22844663 12 137 8.0 6.5 7.2 1.5 166 chrX 22844497 intron,intron fog -,CG42346 + chrX 22844580 intron,intron fog -,CG42346 + chrX 22844663 intron,intron fog -,CG42346 + chrX_12_22840001 chrX_22840001 RAL-109_125b 4411 chrX 22891096 22891121 chrX 22891229 22891254 8 132 7.0 5.5 6.2 1.1 158 chrX 22891096 intergenic not near genes chrX 22891175 intergenic not near genes chrX 22891254 intergenic not near genes chrX_8_22890001 chrX_22890001 RAL-109_125b 4412 chrX 22916149 22916205 chrX 22916347 22916391 10 187 0.0 11.0 5.5 1.5 242 chrX 22916149 intergenic not near genes chrX 22916270 intergenic not near genes chrX 22916391 intergenic not near genes chrX_10_22915001 chrX_22915001 RAL-109_125b 4413 chrX 22987074 22987113 chrX 22989783 22989821 Burdock 9 2709 6.0 7.5 6.8 1.2 2747 chrX 22987074 intron,intron stnA -,stnB - chrX 22988448 intron,intron stnA -,stnB - chrX 22989821 intron,intron stnA -,stnB - chrX_9_22985001 chrX_22985001 RAL-109_125b 4414 chrX 22996282 22996334 chrX 23003550 23003593 roo 14 7278 3.5 7.0 5.2 2.3 7311 chrX 22996282 intron,intron stnA -,stnB - chrX 22999938 intron,intron stnA -,stnB - chrX 23003593 intron,intron stnA -,stnB - chrX_14_22995001 chrX_22995001 RAL-109_125b 4415 chrY 864677 864741 chrY 864804 864867 7 126 35.0 34.5 34.8 0.2 190 chrY 864677 intergenic not near genes chrY 864772 intergenic not near genes chrY 864867 intergenic not near genes chrY_7_860001 chrY_860001 RAL-109_125b 4416 chrY 975602 975822 chrY 975711 975931 17 135 188.0 161.5 174.8 0.1 329 chrY 975602 intergenic not near genes chrY 975766 intergenic not near genes chrY 975931 intergenic not near genes chrY_17_975001 chrY_975001 RAL-109_125b 4417 chrY 1445411 1445436 chrY 1447399 1447416 11 1981 16.5 15.5 16.0 0.6 2005 chrY 1445411 intergenic not near genes chrY 1446414 intergenic not near genes chrY 1447416 intergenic not near genes chrY_11_1445001 chrY_1445001 RAL-109_125b 4418 chrY 3664553 3664627 chrY 3664706 3664735 6 146 1.5 1.5 1.5 2.4 182 chrY 3664553 exon CG40948 + chrY 3664644 intergenic CG40948 + chrY 3664735 intergenic CG40948 + chrY_6_3660001 chrY_3660001 RAL-109_125b 4419 chrY 3664971 3665016 chrY 3665125 3665170 5 154 0.5 2.0 1.2 2.3 199 chrY 3664971 intergenic CG40948 + chrY 3665070 intergenic not near genes chrY 3665170 intergenic not near genes chrY_5_3665001 chrY_3665001 RAL-109_125b