SV#	Chr_5p	Chr_coord_5p_start	Chr_coord_5p_end	Chr_3p	Chr_coord_3p_start	Chr_coord_3p_end	repName	Reads_collapsed	avg_del_len	RefGen_3prime	Refgen_5prime	RefGen_Avg	Coverage_Ratio	size	Chr_5p	Chr_coord_5p	classification_5p	comment_5p	Chr_mid	Chr_coord_mid	classification_mid	comment_mid	Chr_3p	Chr_coord_3p	classification_3p	comment_3p	depletion_code	loci_code	libname
3	chr2L	47457	47491	chr2L	52563	52597	jockey	37	5106	19.5	16.0	17.8	2.0	5140	chr2L	47457	intron	Cda5 -	chr2L	50027	intron	Cda5 -	chr2L	52597	intron	Cda5 -	chr2L_37_50001	chr2L_50001	ZS11_1-HE
10	chr2L	347883	347919	chr2L	355384	355417	blood	14	7501	2.0	5.5	3.8	2.9	7534	chr2L	347883	3` UTR	Plc21C +	chr2L	351650	intron	Plc21C +	chr2L	355417	3` UTR	Plc21C +	chr2L_14_350001	chr2L_350001	ZS11_1-HE
16	chr2L	686918	686951	chr2L	695959	695992	roo	10	9041	6.0	2.0	4.0	2.0	9074	chr2L	686918	intron	ds -	chr2L	691455	intron	ds -	chr2L	695992	intron	ds -	chr2L_10_690001	chr2L_690001	ZS11_1-HE
22	chr2L	770464	770491	chr2L	772246	772273	Bari1	14	1781	5.5	3.0	4.2	2.7	1809	chr2L	770464	intergenic	not near genes	chr2L	771368	intergenic	not near genes	chr2L	772273	intergenic	CR44614 +	chr2L_14_770001	chr2L_770001	ZS11_1-HE
29	chr2L	976878	976910	chr2L	984515	984547	roo	23	7637	8.5	4.5	6.5	3.1	7669	chr2L	976878	intergenic	not near genes	chr2L	980712	intergenic	not near genes	chr2L	984547	intergenic	not near genes	chr2L_23_980001	chr2L_980001	ZS11_1-HE
30	chr2L	996721	996753	chr2L	1005817	1005849	roo	9	9096	0.0	5.0	2.5	2.6	9128	chr2L	996721	intergenic	not near genes	chr2L	1001285	intergenic	not near genes	chr2L	1005849	intergenic	not near genes	chr2L_9_1000001	chr2L_1000001	ZS11_1-HE
34	chr2L	1220126	1220162	chr2L	1227593	1227629	blood	24	7467	3.5	3.5	3.5	5.3	7503	chr2L	1220126	intron	CG42329 +	chr2L	1223878	intron	CG42329 +	chr2L	1227629	intron	CG42329 +	chr2L_24_1220001	chr2L_1220001	ZS11_1-HE
38	chr2L	1301751	1301785	chr2L	1302289	1302325	gypsy	13	540	0.0	12.5	6.2	1.8	574	chr2L	1301751	intergenic	not near genes	chr2L	1302038	intergenic	not near genes	chr2L	1302325	intergenic	not near genes	chr2L_13_1300001	chr2L_1300001	ZS11_1-HE
47	chr2L	1570686	1570718	chr2L	1573558	1573591	F-element	30	2873	11.0	6.5	8.8	3.1	2905	chr2L	1570686	intron	haf +	chr2L	1572138	intron	haf +	chr2L	1573591	intron	haf +	chr2L_30_1570001	chr2L_1570001	ZS11_1-HE
52	chr2L	1678974	1679008	chr2L	1686440	1686474	blood	13	7466	3.5	11.0	7.2	1.6	7500	chr2L	1678974	intron	chinmo +	chr2L	1682724	intron	chinmo +	chr2L	1686474	intron	chinmo +	chr2L_13_1680001	chr2L_1680001	ZS11_1-HE
53	chr2L	1711354	1711386	chr2L	1711679	1711711	mdg3	9	325	2.0	2.0	2.0	3.0	357	chr2L	1711354	3` UTR,3` UTR	mRpL48 +,frtz -	chr2L	1711532	3` UTR	frtz -	chr2L	1711711	3` UTR	frtz -	chr2L_9_1710001	chr2L_1710001	ZS11_1-HE
61	chr2L	2100380	2100403	chr2L	2109526	2109555	roo	11	9151	6.0	7.5	6.8	1.4	9175	chr2L	2100380	intron	dpr3 -	chr2L	2104968	intron	dpr3 -	chr2L	2109555	intron	dpr3 -	chr2L_11_2100001	chr2L_2100001	ZS11_1-HE
62	chr2L	2112118	2112146	chr2L	2119779	2119809	opus	13	7662	4.0	8.5	6.2	1.8	7691	chr2L	2112118	intergenic	not near genes	chr2L	2115964	intergenic	not near genes	chr2L	2119809	intergenic	not near genes	chr2L_13_2115001	chr2L_2115001	ZS11_1-HE
66	chr2L	2294042	2294075	chr2L	2299248	2299281	copia	12	5202	2.0	5.0	3.5	2.7	5239	chr2L	2294042	intergenic	not near genes	chr2L	2296662	intergenic	not near genes	chr2L	2299281	intergenic	not near genes	chr2L_12_2295001	chr2L_2295001	ZS11_1-HE
78	chr2L	2661221	2661234	chr2L	2663037	2663073	I-element	6	1829	3.5	4.0	3.8	1.2	1852	chr2L	2661221	intergenic	not near genes	chr2L	2662147	intergenic	not near genes	chr2L	2663073	intergenic	not near genes	chr2L_6_2660001	chr2L_2660001	ZS11_1-HE
81	chr2L	2772613	2772624	chr2L	2779198	2779208	297	6	6585	5.5	5.0	5.2	1.0	6595	chr2L	2772613	3` UTR	Syt1 -	chr2L	2775910	intron	Syt1 -	chr2L	2779208	3` UTR	Syt1 -	chr2L_6_2775001	chr2L_2775001	ZS11_1-HE
87	chr2L	2933302	2933325	chr2L	2935480	2935503	pogo	14	2178	12.0	14.5	13.2	1.0	2201	chr2L	2933302	intron	lilli +	chr2L	2934402	intron	lilli +	chr2L	2935503	intron	lilli +	chr2L_14_2930001	chr2L_2930001	ZS11_1-HE
89	chr2L	3073029	3073046	chr2L	3078233	3078250	copia	9	5204	4.5	2.0	3.2	2.1	5221	chr2L	3073029	intron	toc -	chr2L	3075640	intron	toc -	chr2L	3078250	intron	toc -	chr2L_9_3075001	chr2L_3075001	ZS11_1-HE
96	chr2L	3251493	3251524	chr2L	3259059	3259090	springer	12	7566	7.5	4.0	5.8	1.8	7597	chr2L	3251493	intergenic	not near genes	chr2L	3255292	intergenic	not near genes	chr2L	3259090	intergenic	not near genes	chr2L_12_3255001	chr2L_3255001	ZS11_1-HE
102	chr2L	3388598	3388631	chr2L	3388840	3388873	pogo	18	242	3.5	6.0	4.8	3.1	275	chr2L	3388598	intergenic	CG42460 -	chr2L	3388736	intergenic	CG42460 -	chr2L	3388873	intergenic	CG42460 -,CR44791 +	chr2L_18_3385001	chr2L_3385001	ZS11_1-HE
111	chr2L	3649784	3649820	chr2L	3654988	3655024	copia	13	5204	2.5	4.0	3.2	3.1	5240	chr2L	3649784	intron	for -	chr2L	3652404	intron	for -	chr2L	3655024	intron	for -	chr2L_13_3650001	chr2L_3650001	ZS11_1-HE
127	chr2L	4066035	4066066	chr2L	4068861	4068892	Juan	19	2826	12.0	5.0	8.5	2.0	2857	chr2L	4066035	intron	ed +	chr2L	4067464	intron	ed +	chr2L	4068892	intron	ed +	chr2L_19_4065001	chr2L_4065001	ZS11_1-HE
132	chr2L	4181293	4181297	chr2L	4183926	4183930	Burdock	4	2633	5.5	7.0	6.2	0.6	2637	chr2L	4181293	intergenic	not near genes	chr2L	4182612	intergenic	not near genes	chr2L	4183930	intergenic	not near genes	chr2L_4_4180001	chr2L_4180001	ZS11_1-HE
145	chr2L	4601702	4601732	chr2L	4609144	4609174	mdg1	12	7442	2.5	4.0	3.2	2.9	7472	chr2L	4601702	intron	dp -	chr2L	4605438	intron	dp -	chr2L	4609174	intron	dp -	chr2L_12_4605001	chr2L_4605001	ZS11_1-HE
172	chr2L	5827710	5827717	chr2L	5836719	5836726	roo	4	9009	12.0	4.5	8.2	0.4	9016	chr2L	5827710	intron	TrissinR +	chr2L	5832218	intron	TrissinR +	chr2L	5836726	intron	TrissinR +	chr2L_4_5830001	chr2L_5830001	ZS11_1-HE
173	chr2L	5827718	5827738	chr2L	5836718	5836747	roo	10	9008	6.5	4.5	5.5	1.5	9029	chr2L	5827718	intron	TrissinR +	chr2L	5832232	intron	TrissinR +	chr2L	5836747	intron	TrissinR +	chr2L_10_5830001	chr2L_5830001	ZS11_1-HE
195	chr2L	6363147	6363183	chr2L	6366070	6366100	Burdock	10	2921	1.5	1.5	1.5	4.0	2953	chr2L	6363147	intergenic	not near genes	chr2L	6364624	intergenic	not near genes	chr2L	6366100	intergenic	not near genes	chr2L_10_6360001	chr2L_6360001	ZS11_1-HE
197	chr2L	6426856	6426885	chr2L	6445117	6445146	roo	14	18261	2.5	1.0	1.8	5.0	18290	chr2L	6426856	3` UTR	CG9527 -	chr2L	6436001	intron	CG9527 -	chr2L	6445146	exon	CG9527 -	chr2L_14_6435001	chr2L_6435001	ZS11_1-HE
210	chr2L	6876776	6876809	chr2L	6882968	6882996	diver	9	6191	6.0	3.5	4.8	1.6	6220	chr2L	6876776	intron	Nlg2 +	chr2L	6879886	intron	Nlg2 +	chr2L	6882996	intron	Nlg2 +	chr2L_9_6875001	chr2L_6875001	ZS11_1-HE
222	chr2L	7343327	7343337	chr2L	7350444	7350454	roo	6	7117	19.0	7.5	13.2	0.4	7127	chr2L	7343327	intron	Wnt6 +	chr2L	7346890	intron	Wnt6 +	chr2L	7350454	intron	Wnt6 +	chr2L_6_7345001	chr2L_7345001	ZS11_1-HE
223	chr2L	7343338	7343359	chr2L	7350440	7350474	roo	5	7113	11.5	7.5	9.5	0.5	7136	chr2L	7343338	intron	Wnt6 +	chr2L	7346906	intron	Wnt6 +	chr2L	7350474	intron	Wnt6 +	chr2L_5_7345001	chr2L_7345001	ZS11_1-HE
236	chr2L	7959039	7959073	chr2L	7960451	7960485	pogo	13	1412	1.5	2.5	2.0	4.3	1446	chr2L	7959039	intron	Snoo -	chr2L	7959762	intron	Snoo -	chr2L	7960485	intron	Snoo -	chr2L_13_7955001	chr2L_7955001	ZS11_1-HE
237	chr2L	7977090	7977113	chr2L	7984066	7984089	297	11	6976	10.0	10.0	10.0	1.0	6999	chr2L	7977090	intron	Snoo -	chr2L	7980590	intron	Snoo -	chr2L	7984089	intron,5` UTR	Snoo -,CG7231 +	chr2L_11_7980001	chr2L_7980001	ZS11_1-HE
239	chr2L	8013613	8013632	chr2L	8018818	8018837	copia	8	5205	2.5	0.0	1.2	3.6	5224	chr2L	8013613	intron	Tg +	chr2L	8016225	intron	Tg +	chr2L	8018837	intron	Tg +	chr2L_8_8015001	chr2L_8015001	ZS11_1-HE
240	chr2L	8018818	8018837	chr2L	8023603	8023622	Doc	6	4785	0.0	1.0	0.5	4.0	4804	chr2L	8018818	intron	Tg +	chr2L	8021220	intron	Tg +	chr2L	8023622	intron	Tg +	chr2L_6_8020001	chr2L_8020001	ZS11_1-HE
249	chr2L	8452417	8452451	chr2L	8461589	8461623	roo	19	9172	7.5	3.5	5.5	2.9	9206	chr2L	8452417	intron	fu12 -	chr2L	8457020	intron	fu12 -	chr2L	8461623	intron	fu12 -	chr2L_19_8455001	chr2L_8455001	ZS11_1-HE
253	chr2L	8594463	8594498	chr2L	8601518	8601553	297	9	7052	4.0	0.0	2.0	3.0	7090	chr2L	8594463	intron,3` UTR	Sema-1a +,CR43855 -	chr2L	8598008	intron	Sema-1a +	chr2L	8601553	intron	Sema-1a +	chr2L_9_8595001	chr2L_8595001	ZS11_1-HE
259	chr2L	8723114	8723144	chr2L	8731492	8731522	Tirant	15	8378	5.0	2.5	3.8	3.1	8408	chr2L	8723114	intron	raw -	chr2L	8727318	intron	raw -	chr2L	8731522	intron	raw -	chr2L_15_8725001	chr2L_8725001	ZS11_1-HE
264	chr2L	9000277	9000306	chr2L	9007788	9007816	roo	15	7511	6.5	6.0	6.2	2.1	7539	chr2L	9000277	intergenic	Try29F +	chr2L	9004046	intergenic	not near genes	chr2L	9007816	intergenic	not near genes	chr2L_15_9000001	chr2L_9000001	ZS11_1-HE
271	chr2L	9217968	9217999	chr2L	9222756	9222787	Doc	6	4788	10.0	0.5	5.2	1.0	4819	chr2L	9217968	intron	tai +	chr2L	9220378	intron	tai +	chr2L	9222787	intron	tai +	chr2L_6_9220001	chr2L_9220001	ZS11_1-HE
280	chr2L	9393500	9393509	chr2L	9396468	9396477	jockey	8	2967	8.0	9.5	8.8	0.8	2977	chr2L	9393500	intron	Shawl -	chr2L	9394988	intron	Shawl -	chr2L	9396477	intron	Shawl -	chr2L_8_9390001	chr2L_9390001	ZS11_1-HE
281	chr2L	9393513	9393521	chr2L	9396465	9396489	jockey	7	2966	4.5	8.0	6.2	1.0	2976	chr2L	9393513	intron	Shawl -	chr2L	9395001	intron	Shawl -	chr2L	9396489	intron	Shawl -	chr2L_7_9390001	chr2L_9390001	ZS11_1-HE
300	chr2L	9973723	9973759	chr2L	9980843	9980879	HMS-Beagle	13	7120	4.5	3.5	4.0	2.6	7156	chr2L	9973723	intergenic	not near genes	chr2L	9977301	intergenic	not near genes	chr2L	9980879	intergenic	not near genes	chr2L_13_9975001	chr2L_9975001	ZS11_1-HE
305	chr2L	10156342	10156353	chr2L	10163806	10163823	blood	5	7469	0.0	8.5	4.2	1.0	7481	chr2L	10156342	intron,3` UTR	CG44153 -,CG4839 +	chr2L	10160082	intron	CG44153 -	chr2L	10163823	intron	CG44153 -	chr2L_5_10160001	chr2L_10160001	ZS11_1-HE
316	chr2L	10592840	10592875	chr2L	10600503	10600538	opus	30	7663	6.0	9.0	7.5	3.5	7698	chr2L	10592840	intron	Trim9 +	chr2L	10596689	intron	Trim9 +	chr2L	10600538	intron	Trim9 +	chr2L_30_10595001	chr2L_10595001	ZS11_1-HE
325	chr2L	10862843	10862876	chr2L	10864458	10864491	Rt1c	11	1614	5.5	5.0	5.2	1.8	1648	chr2L	10862843	3` UTR	CR43807 -	chr2L	10863667	intron	CR43807 -	chr2L	10864491	3` UTR	CR43807 -	chr2L_11_10860001	chr2L_10860001	ZS11_1-HE
327	chr2L	10946946	10946976	chr2L	10956162	10956192	roo	12	9215	6.0	9.5	7.8	1.4	9246	chr2L	10946946	intron	dpr2 -	chr2L	10951569	intron	dpr2 -	chr2L	10956192	intron	dpr2 -	chr2L_12_10950001	chr2L_10950001	ZS11_1-HE
336	chr2L	11315267	11315272	chr2L	11317672	11317677	G2	6	2405	5.5	0.5	3.0	1.5	2410	chr2L	11315267	intergenic	not near genes	chr2L	11316472	intergenic	not near genes	chr2L	11317677	intergenic	not near genes	chr2L_6_11315001	chr2L_11315001	ZS11_1-HE
342	chr2L	11540582	11540613	chr2L	11547985	11548016	Tabor	9	7403	5.5	5.5	5.5	1.4	7434	chr2L	11540582	intergenic	not near genes	chr2L	11544299	intergenic	not near genes	chr2L	11548016	intergenic	not near genes	chr2L_9_11540001	chr2L_11540001	ZS11_1-HE
343	chr2L	11563634	11563654	chr2L	11568839	11568859	copia	9	5205	6.0	2.0	4.0	1.8	5225	chr2L	11563634	intergenic	not near genes	chr2L	11566246	intergenic	not near genes	chr2L	11568859	intergenic	not near genes	chr2L_9_11565001	chr2L_11565001	ZS11_1-HE
345	chr2L	11614055	11614083	chr2L	11615547	11615579	hopper2	10	1495	3.0	6.0	4.5	1.8	1524	chr2L	11614055	intron	kek2 +	chr2L	11614817	intron	kek2 +	chr2L	11615579	intron	kek2 +	chr2L_10_11610001	chr2L_11610001	ZS11_1-HE
361	chr2L	12067328	12067360	chr2L	12074381	12074413	297	18	7053	4.5	2.5	3.5	4.0	7085	chr2L	12067328	intergenic	not near genes	chr2L	12070870	intergenic	not near genes	chr2L	12074413	intergenic	not near genes	chr2L_18_12070001	chr2L_12070001	ZS11_1-HE
384	chr2L	12558318	12558349	chr2L	12565448	12565479	HMS-Beagle	7	7130	1.0	2.0	1.5	2.8	7161	chr2L	12558318	intergenic	not near genes	chr2L	12561898	intergenic	not near genes	chr2L	12565479	intergenic	not near genes	chr2L_7_12560001	chr2L_12560001	ZS11_1-HE
389	chr2L	12728918	12728946	chr2L	12729161	12729188	pogo	18	242	5.0	7.5	6.2	2.5	270	chr2L	12728918	intron	MRP +	chr2L	12729053	intron	MRP +	chr2L	12729188	exon	MRP +	chr2L_18_12725001	chr2L_12725001	ZS11_1-HE
390	chr2L	12731056	12731087	chr2L	12735824	12735855	F-element	11	4768	4.5	4.0	4.2	2.1	4799	chr2L	12731056	intron	MRP +	chr2L	12733456	intron	MRP +	chr2L	12735855	intron	MRP +	chr2L_11_12730001	chr2L_12730001	ZS11_1-HE
391	chr2L	12739172	12739204	chr2L	12743954	12743986	Doc	17	4782	3.5	4.0	3.8	3.5	4814	chr2L	12739172	exon	MRP +	chr2L	12741579	intron	MRP +	chr2L	12743986	exon	MRP +	chr2L_17_12740001	chr2L_12740001	ZS11_1-HE
393	chr2L	12763863	12763871	chr2L	12764064	12764072	BS	6	201	0.0	7.0	3.5	1.3	209	chr2L	12763863	intergenic	not near genes	chr2L	12763968	intergenic	not near genes	chr2L	12764072	intergenic	not near genes	chr2L_6_12760001	chr2L_12760001	ZS11_1-HE
395	chr2L	12781801	12781814	chr2L	12789245	12789258	Quasimodo	13	7444	20.5	12.5	16.5	0.7	7457	chr2L	12781801	intergenic	not near genes	chr2L	12785530	intergenic	not near genes	chr2L	12789258	intergenic	not near genes	chr2L_13_12785001	chr2L_12785001	ZS11_1-HE
396	chr2L	12791602	12791605	chr2L	12795278	12795281	F-element	4	3676	15.5	15.0	15.2	0.2	3679	chr2L	12791602	intergenic	not near genes	chr2L	12793442	intergenic	not near genes	chr2L	12795281	intergenic	not near genes	chr2L_4_12790001	chr2L_12790001	ZS11_1-HE
397	chr2L	12791606	12791633	chr2L	12795276	12795309	F-element	16	3676	14.0	14.0	14.0	1.1	3703	chr2L	12791606	intergenic	not near genes	chr2L	12793458	intergenic	not near genes	chr2L	12795309	intergenic	not near genes	chr2L_16_12790001	chr2L_12790001	ZS11_1-HE
399	chr2L	12861692	12861730	chr2L	12863160	12863197	hobo	19	1468	2.5	5.0	3.8	4.0	1505	chr2L	12861692	intergenic	not near genes	chr2L	12862444	intergenic	not near genes	chr2L	12863197	intergenic	not near genes	chr2L_19_12860001	chr2L_12860001	ZS11_1-HE
401	chr2L	12894021	12894050	chr2L	12895484	12895518	hobo	13	1466	4.0	11.5	7.8	1.5	1497	chr2L	12894021	intergenic	not near genes	chr2L	12894770	intergenic	not near genes	chr2L	12895518	intergenic	not near genes	chr2L_13_12890001	chr2L_12890001	ZS11_1-HE
404	chr2L	12933848	12933880	chr2L	12941316	12941348	blood	16	7467	5.0	5.0	5.0	2.7	7500	chr2L	12933848	intergenic	not near genes	chr2L	12937598	intergenic	not near genes	chr2L	12941348	intergenic	not near genes	chr2L_16_12935001	chr2L_12935001	ZS11_1-HE
405	chr2L	13036243	13036272	chr2L	13036486	13036515	X-element	13	243	2.5	6.0	4.2	2.5	272	chr2L	13036243	intron	CG9932 -	chr2L	13036379	intron	CG9932 -	chr2L	13036515	intron	CG9932 -	chr2L_13_13035001	chr2L_13035001	ZS11_1-HE
410	chr2L	13405647	13405674	chr2L	13410445	13410472	Doc	7	4798	2.5	4.5	3.5	1.6	4825	chr2L	13405647	exon	CG7110 +	chr2L	13408060	intron	CG7110 +	chr2L	13410472	intron	CG7110 +	chr2L_7_13405001	chr2L_13405001	ZS11_1-HE
413	chr2L	13449472	13449495	chr2L	13456909	13456932	Quasimodo	7	7437	4.5	6.5	5.5	1.1	7460	chr2L	13449472	intron,5` UTR	CG42784 +,Hsp60D -	chr2L	13453202	intron	CG42784 +	chr2L	13456932	intron	CG42784 +	chr2L_7_13450001	chr2L_13450001	ZS11_1-HE
414	chr2L	13481448	13481475	chr2L	13482056	13482083	jockey	22	608	16.0	13.5	14.8	1.4	635	chr2L	13481448	intron	CG42784 +	chr2L	13481766	intron	CG42784 +	chr2L	13482083	intron	CG42784 +	chr2L_22_13480001	chr2L_13480001	ZS11_1-HE
424	chr2L	13761802	13761830	chr2L	13762914	13762942	Doc	9	1112	4.0	5.0	4.5	1.6	1140	chr2L	13761802	intron	TM9SF4 +	chr2L	13762372	intron	TM9SF4 +	chr2L	13762942	intron	TM9SF4 +	chr2L_9_13760001	chr2L_13760001	ZS11_1-HE
427	chr2L	13853093	13853116	chr2L	13862244	13862267	roo	6	9151	5.0	2.0	3.5	1.3	9174	chr2L	13853093	intron	CenG1A +	chr2L	13857680	intron	CenG1A +	chr2L	13862267	intron	CenG1A +	chr2L_6_13855001	chr2L_13855001	ZS11_1-HE
439	chr2L	14465584	14465614	chr2L	14469048	14469078	hopper2	16	3464	6.5	1.0	3.8	3.3	3494	chr2L	14465584	intergenic	not near genes	chr2L	14467331	intergenic	not near genes	chr2L	14469078	intergenic	not near genes	chr2L_16_14465001	chr2L_14465001	ZS11_1-HE
455	chr2L	14803879	14803910	chr2L	14809083	14809114	copia	17	5204	3.0	5.5	4.2	3.3	5235	chr2L	14803879	intergenic	not near genes	chr2L	14806496	intergenic	not near genes	chr2L	14809114	intergenic	not near genes	chr2L_17_14805001	chr2L_14805001	ZS11_1-HE
458	chr2L	14889950	14889971	chr2L	14890376	14890397	jockey	16	426	12.0	4.5	8.2	1.7	447	chr2L	14889950	intergenic	not near genes	chr2L	14890174	intergenic	not near genes	chr2L	14890397	intergenic	not near genes	chr2L_16_14890001	chr2L_14890001	ZS11_1-HE
463	chr2L	14984381	14984391	chr2L	14991984	14991994	opus	8	7602	13.5	4.0	8.8	0.8	7613	chr2L	14984381	intron	mol -	chr2L	14988188	intron	mol -	chr2L	14991994	intron	mol -	chr2L_8_14985001	chr2L_14985001	ZS11_1-HE
481	chr2L	15446048	15446083	chr2L	15453518	15453552	blood	19	7470	7.5	7.0	7.2	2.3	7504	chr2L	15446048	intergenic	not near genes	chr2L	15449800	intergenic	not near genes	chr2L	15453552	intergenic	not near genes	chr2L_19_15445001	chr2L_15445001	ZS11_1-HE
485	chr2L	15586403	15586439	chr2L	15593460	15593492	297	9	7056	5.0	5.5	5.2	1.5	7089	chr2L	15586403	intergenic	not near genes	chr2L	15589948	intergenic	not near genes	chr2L	15593492	intergenic	not near genes	chr2L_9_15585001	chr2L_15585001	ZS11_1-HE
494	chr2L	15956027	15956059	chr2L	15957523	15957555	hobo	17	1496	4.0	3.5	3.8	3.5	1528	chr2L	15956027	intron	beat-Ib -	chr2L	15956791	intron	beat-Ib -	chr2L	15957555	intron	beat-Ib -	chr2L_17_15955001	chr2L_15955001	ZS11_1-HE
504	chr2L	16141147	16141196	chr2L	16146369	16146404	copia	21	5208	0.5	6.5	3.5	4.7	5257	chr2L	16141147	intergenic	not near genes	chr2L	16143776	intergenic	not near genes	chr2L	16146404	intergenic	not near genes	chr2L_21_16140001	chr2L_16140001	ZS11_1-HE
505	chr2L	16153741	16153760	chr2L	16160810	16160828	297	13	7069	5.0	3.0	4.0	2.6	7087	chr2L	16153741	intergenic	not near genes	chr2L	16157284	intergenic	not near genes	chr2L	16160828	intergenic	not near genes	chr2L_13_16155001	chr2L_16155001	ZS11_1-HE
515	chr2L	16511960	16511994	chr2L	16519075	16519109	HMS-Beagle	22	7115	4.5	5.0	4.8	3.8	7149	chr2L	16511960	intron	CG5953 -	chr2L	16515534	intron	CG5953 -	chr2L	16519109	intron	CG5953 -	chr2L_22_16515001	chr2L_16515001	ZS11_1-HE
524	chr2L	16958102	16958134	chr2L	16962891	16962923	Doc	26	4789	8.0	11.5	9.8	2.4	4821	chr2L	16958102	intergenic	not near genes	chr2L	16960512	intergenic	not near genes	chr2L	16962923	intergenic	not near genes	chr2L_26_16960001	chr2L_16960001	ZS11_1-HE
538	chr2L	17167563	17167588	chr2L	17167805	17167830	pogo	12	242	5.0	5.0	5.0	2.0	267	chr2L	17167563	intron,intron	CG34106 +,beat-IIIa +	chr2L	17167696	intron,intron	CG34106 +,beat-IIIa +	chr2L	17167830	intron,intron	CG34106 +,beat-IIIa +	chr2L_12_17165001	chr2L_17165001	ZS11_1-HE
540	chr2L	17199156	17199194	chr2L	17200624	17200662	hobo	29	1468	8.0	5.5	6.8	3.7	1506	chr2L	17199156	intron	beat-IIIc -	chr2L	17199909	intron	beat-IIIc -	chr2L	17200662	intron	beat-IIIc -	chr2L_29_17195001	chr2L_17195001	ZS11_1-HE
547	chr2L	17273189	17273224	chr2L	17277973	17278008	F-element	18	4783	6.0	5.0	5.5	2.8	4819	chr2L	17273189	intergenic	not near genes	chr2L	17275598	intergenic	not near genes	chr2L	17278008	intergenic	not near genes	chr2L_18_17275001	chr2L_17275001	ZS11_1-HE
551	chr2L	17335547	17335580	chr2L	17336714	17336721	1360	12	1165	6.0	6.5	6.2	1.7	1174	chr2L	17335547	intergenic	not near genes	chr2L	17336134	intergenic	not near genes	chr2L	17336721	intergenic	not near genes	chr2L_12_17335001	chr2L_17335001	ZS11_1-HE
564	chr2L	17687515	17687522	chr2L	17692261	17692268	F-element	12	4746	8.5	9.0	8.8	1.2	4753	chr2L	17687515	intron	CadN -	chr2L	17689892	intron	CadN -	chr2L	17692268	intron	CadN -	chr2L_12_17685001	chr2L_17685001	ZS11_1-HE
566	chr2L	17727867	17727882	chr2L	17729335	17729350	hobo	13	1468	10.5	21.5	16.0	0.8	1483	chr2L	17727867	intron	CadN -	chr2L	17728608	intron	CadN -	chr2L	17729350	intron	CadN -	chr2L_13_17725001	chr2L_17725001	ZS11_1-HE
568	chr2L	17819919	17819954	chr2L	17825123	17825158	copia	16	5204	3.0	4.0	3.5	3.6	5239	chr2L	17819919	intron	CadN2 -	chr2L	17822538	intron	CadN2 -	chr2L	17825158	intron	CadN2 -	chr2L_16_17820001	chr2L_17820001	ZS11_1-HE
573	chr2L	17911959	17911990	chr2L	17914137	17914169	pogo	19	2179	4.0	5.5	4.8	3.3	2210	chr2L	17911959	intergenic	not near genes	chr2L	17913064	intergenic	not near genes	chr2L	17914169	intergenic	CG43271 -	chr2L_19_17910001	chr2L_17910001	ZS11_1-HE
575	chr2L	17951943	17951979	chr2L	17953411	17953447	hobo	14	1468	5.0	6.5	5.8	2.1	1504	chr2L	17951943	intergenic	CR44398 -,CR44397 -	chr2L	17952695	intergenic	not near genes	chr2L	17953447	intergenic	not near genes	chr2L_14_17950001	chr2L_17950001	ZS11_1-HE
577	chr2L	18051873	18051907	chr2L	18061021	18061055	roo	20	9148	5.0	3.0	4.0	4.0	9182	chr2L	18051873	intron	rdo +	chr2L	18056464	intron	rdo +	chr2L	18061055	intron	rdo +	chr2L_20_18055001	chr2L_18055001	ZS11_1-HE
586	chr2L	18408022	18408052	chr2L	18412807	18412837	Doc	13	4785	7.5	0.0	3.8	2.7	4815	chr2L	18408022	intergenic	not near genes	chr2L	18410430	intergenic	not near genes	chr2L	18412837	intergenic	not near genes	chr2L_13_18410001	chr2L_18410001	ZS11_1-HE
603	chr2L	19147367	19147402	chr2L	19154403	19154438	297	25	7036	5.0	11.0	8.0	2.8	7071	chr2L	19147367	intron	brat +	chr2L	19150902	intron	brat +	chr2L	19154438	intron	brat +	chr2L_25_19150001	chr2L_19150001	ZS11_1-HE
610	chr2L	19345013	19345035	chr2L	19357223	19357245	blood	14	12209	10.0	10.0	10.0	1.3	12232	chr2L	19345013	intron	dnt -	chr2L	19351129	intron	dnt -	chr2L	19357245	intron	dnt -	chr2L_14_19350001	chr2L_19350001	ZS11_1-HE
611	chr2L	19345036	19345046	chr2L	19357219	19357256	blood	8	12207	6.5	8.0	7.2	1.0	12220	chr2L	19345036	intron	dnt -	chr2L	19351146	intron	dnt -	chr2L	19357256	intron	dnt -	chr2L_8_19350001	chr2L_19350001	ZS11_1-HE
625	chr2L	19620091	19620131	chr2L	19621080	19621121	jockey	36	989	7.0	9.0	8.0	4.0	1030	chr2L	19620091	intron	Lar +	chr2L	19620606	intron	Lar +	chr2L	19621121	intron	Lar +	chr2L_36_19620001	chr2L_19620001	ZS11_1-HE
626	chr2L	19652567	19652601	chr2L	19674004	19674038	opus	21	21437	7.0	5.5	6.2	2.9	21471	chr2L	19652567	intron	Lar +	chr2L	19663302	intron	Lar +	chr2L	19674038	intron	Lar +	chr2L_21_19660001	chr2L_19660001	ZS11_1-HE
628	chr2L	19703535	19703568	chr2L	19712672	19712705	roo	22	9137	10.0	9.0	9.5	2.1	9170	chr2L	19703535	intron	Lar +	chr2L	19708120	intron	Lar +	chr2L	19712705	intron	Lar +	chr2L_22_19705001	chr2L_19705001	ZS11_1-HE
629	chr2L	19737364	19737388	chr2L	19740834	19740843	1360	9	3468	1.5	1.0	1.2	4.1	3479	chr2L	19737364	intergenic	Nf-YB +	chr2L	19739104	intergenic	not near genes	chr2L	19740843	intergenic	not near genes	chr2L_9_19735001	chr2L_19735001	ZS11_1-HE
630	chr2L	19762806	19762839	chr2L	19763049	19763082	pogo	4	243	1.5	1.0	1.2	1.8	276	chr2L	19762806	5` UTR	fbp -	chr2L	19762944	intron	fbp -	chr2L	19763082	intron	fbp -	chr2L_4_19760001	chr2L_19760001	ZS11_1-HE
638	chr2L	20005871	20005899	chr2L	20010948	20010976	flea	11	5077	6.5	6.0	6.2	1.5	5105	chr2L	20005871	intron	CG43861 -	chr2L	20008424	intron	CG43861 -	chr2L	20010976	intron	CG43861 -	chr2L_11_20005001	chr2L_20005001	ZS11_1-HE
644	chr2L	20272111	20272145	chr2L	20282823	20282857	copia	32	10712	5.0	7.0	6.0	4.6	10746	chr2L	20272111	intergenic	not near genes	chr2L	20277484	intergenic	not near genes	chr2L	20282857	intergenic	not near genes	chr2L_32_20275001	chr2L_20275001	ZS11_1-HE
648	chr2L	20303163	20303194	chr2L	20310632	20310663	blood	14	7469	0.0	5.5	2.8	3.7	7500	chr2L	20303163	intergenic	not near genes	chr2L	20306913	intergenic	not near genes	chr2L	20310663	intergenic	not near genes	chr2L_14_20305001	chr2L_20305001	ZS11_1-HE
653	chr2L	20372239	20372257	chr2L	20372474	20372492	pogo	8	235	2.0	9.5	5.8	1.2	253	chr2L	20372239	intergenic	Ugt37a1 -	chr2L	20372366	intergenic	Ugt37a1 -	chr2L	20372492	exon	Ugt37a1 -	chr2L_8_20370001	chr2L_20370001	ZS11_1-HE
660	chr2L	20568660	20568683	chr2L	20569051	20569074	X-element	5	391	2.5	2.0	2.2	1.6	414	chr2L	20568660	intron	CR45347 +	chr2L	20568867	intron	CR45347 +	chr2L	20569074	intron	CR45347 +	chr2L_5_20565001	chr2L_20565001	ZS11_1-HE
661	chr2L	20576218	20576249	chr2L	20583687	20583718	blood	12	7469	2.5	6.0	4.2	2.3	7500	chr2L	20576218	intergenic	CR45347 +	chr2L	20579968	intergenic	not near genes	chr2L	20583718	3` UTR	CR44909 -	chr2L_12_20575001	chr2L_20575001	ZS11_1-HE
666	chr2L	20639513	20639532	chr2L	20639790	20639809	INE-1	9	277	5.5	9.0	7.2	1.1	296	chr2L	20639513	intergenic	not near genes	chr2L	20639661	intergenic	CG31680 +	chr2L	20639809	intergenic	CG31680 +	chr2L_9_20635001	chr2L_20635001	ZS11_1-HE
670	chr2L	20901454	20901486	chr2L	20902619	20902651	1360	20	1165	3.5	3.5	3.5	4.4	1197	chr2L	20901454	intron,intron	CG43739 -,sky -	chr2L	20902052	intron,intron	CG43739 -,sky -	chr2L	20902651	intron,intron	CG43739 -,sky -	chr2L_20_20900001	chr2L_20900001	ZS11_1-HE
674	chr2L	20976638	20976680	chr2L	20981454	20981496	X-element	14	4816	7.5	6.0	6.8	1.8	4858	chr2L	20976638	intron	CG42238 -	chr2L	20979067	intron	CG42238 -	chr2L	20981496	intron	CG42238 -	chr2L_14_20975001	chr2L_20975001	ZS11_1-HE
675	chr2L	21020271	21020311	chr2L	21023949	21023989	NOF	28	3678	7.5	7.0	7.2	3.4	3718	chr2L	21020271	intron	CG42238 -	chr2L	21022130	intron	CG42238 -	chr2L	21023989	intron	CG42238 -	chr2L_28_21020001	chr2L_21020001	ZS11_1-HE
676	chr2L	21041132	21041167	chr2L	21049394	21049429	Tirant	23	8261	8.5	7.0	7.8	2.6	8297	chr2L	21041132	intron	CG42238 -	chr2L	21045280	intron	CG42238 -	chr2L	21049429	intron	CG42238 -	chr2L_23_21045001	chr2L_21045001	ZS11_1-HE
684	chr2L	21347548	21347583	chr2L	21355021	21355056	blood	13	7473	4.0	4.5	4.2	2.5	7508	chr2L	21347548	intron	Tsp39D +	chr2L	21351302	intron	Tsp39D +	chr2L	21355056	intron	Tsp39D +	chr2L_13_21350001	chr2L_21350001	ZS11_1-HE
686	chr2L	21597027	21597062	chr2L	21604772	21604807	roo	10	7745	3.0	2.5	2.8	2.6	7780	chr2L	21597027	intergenic	not near genes	chr2L	21600917	intergenic	not near genes	chr2L	21604807	intergenic	not near genes	chr2L_10_21600001	chr2L_21600001	ZS11_1-HE
687	chr2L	21653194	21653223	chr2L	21656499	21656528	invader4	8	3305	2.0	8.0	5.0	1.3	3334	chr2L	21653194	intergenic	not near genes	chr2L	21654861	intergenic	not near genes	chr2L	21656528	intergenic	not near genes	chr2L_8_21650001	chr2L_21650001	ZS11_1-HE
689	chr2L	21691824	21691857	chr2L	21698295	21698328	Burdock	19	6471	6.5	0.0	3.2	4.5	6504	chr2L	21691824	intron	CG31619 +	chr2L	21695076	intron	CG31619 +	chr2L	21698328	intron	CG31619 +	chr2L_19_21695001	chr2L_21695001	ZS11_1-HE
696	chr2L	21872722	21872740	chr2L	21872981	21872998	INE-1	19	259	14.5	3.5	9.0	1.9	276	chr2L	21872722	intergenic	not near genes	chr2L	21872860	intergenic	not near genes	chr2L	21872998	intergenic	not near genes	chr2L_19_21870001	chr2L_21870001	ZS11_1-HE
698	chr2L	21981683	21981715	chr2L	21990849	21990881	roo	20	9166	2.5	3.5	3.0	5.0	9198	chr2L	21981683	exon	CG2528 -	chr2L	21986282	intron	CG2528 -	chr2L	21990881	exon	CG2528 -	chr2L_20_21985001	chr2L_21985001	ZS11_1-HE
706	chr2L	22258621	22258642	chr2L	22260740	22260767	G6	6	2124	5.5	1.5	3.5	1.3	2146	chr2L	22258621	intergenic	Tif-IA +	chr2L	22259694	intergenic	not near genes	chr2L	22260767	intergenic	not near genes	chr2L_6_22255001	chr2L_22255001	ZS11_1-HE
712	chr2L	22548921	22548942	chr2L	22550147	22550168	1360	9	1226	0.0	8.0	4.0	1.8	1247	chr2L	22548921	intergenic	CG17490 +	chr2L	22549544	intergenic	not near genes	chr2L	22550168	intergenic	CG17493 +	chr2L_9_22545001	chr2L_22545001	ZS11_1-HE
713	chr2L	22581969	22581999	chr2L	22583759	22583789	S-element	7	1790	1.0	1.5	1.2	3.2	1820	chr2L	22581969	intron	CG17494 +	chr2L	22582879	intron	CG17494 +	chr2L	22583789	intron	CG17494 +	chr2L_7_22580001	chr2L_22580001	ZS11_1-HE
715	chr2L	22679809	22679827	chr2L	22684582	22684600	F-element	4	4773	1.0	3.0	2.0	1.3	4791	chr2L	22679809	intron	CG40006 -	chr2L	22682204	intron	CG40006 -	chr2L	22684600	intron	CG40006 -	chr2L_4_22680001	chr2L_22680001	ZS11_1-HE
719	chr2L	22776420	22776449	chr2L	22778210	22778239	S-element	8	1790	1.5	4.5	3.0	2.0	1819	chr2L	22776420	intergenic	not near genes	chr2L	22777330	intergenic	not near genes	chr2L	22778239	intergenic	not near genes	chr2L_8_22775001	chr2L_22775001	ZS11_1-HE
720	chr2R	469961	469972	chr2R	473202	473214	F-element	5	3240	4.0	7.0	5.5	0.8	3253	chr2R	469961	intergenic	not near genes	chr2R	471588	intergenic	not near genes	chr2R	473214	intergenic	not near genes	chr2R_5_470001	chr2R_470001	ZS11_1-HE
721	chr2R	469975	469984	chr2R	473200	473226	F-element	6	3239	3.0	7.0	5.0	1.0	3251	chr2R	469975	intergenic	not near genes	chr2R	471600	intergenic	not near genes	chr2R	473226	intergenic	not near genes	chr2R_6_470001	chr2R_470001	ZS11_1-HE
722	chr2R	529322	529356	chr2R	537948	537982	Max-element	10	8623	4.5	6.5	5.5	1.5	8660	chr2R	529322	intron	CG40378 +	chr2R	533652	intron	CG40378 +	chr2R	537982	intron	CG40378 +	chr2R_10_530001	chr2R_530001	ZS11_1-HE
723	chr2R	552752	552770	chr2R	553971	553989	1360	7	1219	6.5	6.5	6.5	0.9	1237	chr2R	552752	intron	CG40378 +	chr2R	553370	intron	CG40378 +	chr2R	553989	intron	CG40378 +	chr2R_7_550001	chr2R_550001	ZS11_1-HE
724	chr2R	552773	552787	chr2R	553969	554006	1360	7	1213	2.0	5.5	3.8	1.5	1233	chr2R	552773	intron	CG40378 +	chr2R	553390	intron	CG40378 +	chr2R	554006	intron	CG40378 +	chr2R_7_550001	chr2R_550001	ZS11_1-HE
725	chr2R	1082367	1082381	chr2R	1087135	1087158	Doc	4	4775	2.0	2.0	2.0	1.3	4791	chr2R	1082367	intron	rl +	chr2R	1084762	intron	rl +	chr2R	1087158	intron	rl +	chr2R_4_1080001	chr2R_1080001	ZS11_1-HE
727	chr2R	1891143	1891165	chr2R	1893396	1893418	1731	4	2253	19.5	10.0	14.8	0.3	2275	chr2R	1891143	intron	CG17684 -	chr2R	1892280	intron	CG17684 -	chr2R	1893418	intron	CG17684 -	chr2R_4_1890001	chr2R_1890001	ZS11_1-HE
729	chr2R	2498982	2499018	chr2R	2508130	2508166	roo	12	9148	1.0	3.0	2.0	4.0	9184	chr2R	2498982	intron	MFS17 -	chr2R	2503574	intron	MFS17 -	chr2R	2508166	intron	MFS17 -	chr2R_12_2500001	chr2R_2500001	ZS11_1-HE
730	chr2R	2591544	2591550	chr2R	2594221	2594227	roo	6	2677	8.0	3.5	5.8	0.9	2683	chr2R	2591544	intergenic	not near genes	chr2R	2592886	intergenic	not near genes	chr2R	2594227	intergenic	not near genes	chr2R_6_2590001	chr2R_2590001	ZS11_1-HE
731	chr2R	2688953	2688956	chr2R	4570972	4570975	aurora-element	5	1882019	9.5	1.0	5.2	0.8	1882022	chr2R	2688953	intergenic	not near genes	chr2R	3629964	intergenic	not near genes	chr2R	4570975	intergenic	not near genes	chr2R_5_3625001	chr2R_3625001	ZS11_1-HE
738	chr2R	4622956	4622986	chr2R	4624115	4624146	1360	6	1160	1.0	2.0	1.5	2.4	1190	chr2R	4622956	intergenic	CR44101 -	chr2R	4623551	intergenic	not near genes	chr2R	4624146	intergenic	not near genes	chr2R_6_4620001	chr2R_4620001	ZS11_1-HE
739	chr2R	4624641	4624673	chr2R	4626547	4626579	Bica	6	1906	1.5	1.0	1.2	2.7	1938	chr2R	4624641	intergenic	not near genes	chr2R	4625610	intergenic	not near genes	chr2R	4626579	intergenic	not near genes	chr2R_6_4625001	chr2R_4625001	ZS11_1-HE
744	chr2R	4838869	4838885	chr2R	4840393	4840409	transib2	6	1524	4.5	3.0	3.8	1.2	1540	chr2R	4838869	intergenic	not near genes	chr2R	4839639	intergenic	not near genes	chr2R	4840409	intergenic	not near genes	chr2R_6_4835001	chr2R_4835001	ZS11_1-HE
759	chr2R	5417991	5418027	chr2R	5420624	5420660	Burdock	15	2633	4.5	4.0	4.2	2.9	2669	chr2R	5417991	intron	laccase2 +	chr2R	5419326	intron	laccase2 +	chr2R	5420660	intron	laccase2 +	chr2R_15_5415001	chr2R_5415001	ZS11_1-HE
760	chr2R	5450103	5450115	chr2R	5451007	5451019	baggins	4	904	4.5	5.5	5.0	0.7	916	chr2R	5450103	intron	laccase2 +	chr2R	5450561	intron	laccase2 +	chr2R	5451019	intron	laccase2 +	chr2R_4_5450001	chr2R_5450001	ZS11_1-HE
766	chr2R	5543204	5543218	chr2R	5547289	5547303	invader1	5	4084	0.0	9.0	4.5	0.9	4099	chr2R	5543204	intron	CG30438 +	chr2R	5545254	intron	CG30438 +	chr2R	5547303	intron	CG30438 +	chr2R_5_5545001	chr2R_5545001	ZS11_1-HE
774	chr2R	5869275	5869309	chr2R	5874352	5874386	flea	18	5077	6.0	6.0	6.0	2.6	5111	chr2R	5869275	intergenic	not near genes	chr2R	5871830	intergenic	not near genes	chr2R	5874386	intergenic	not near genes	chr2R_18_5870001	chr2R_5870001	ZS11_1-HE
776	chr2R	5902154	5902184	chr2R	5909714	5909744	17.6	9	7560	6.5	4.5	5.5	1.4	7590	chr2R	5902154	intron	CG43366 +	chr2R	5905949	intron	CG43366 +	chr2R	5909744	intron	CG43366 +	chr2R_9_5905001	chr2R_5905001	ZS11_1-HE
777	chr2R	6096739	6096750	chr2R	6101920	6101945	BS	8	5193	5.0	7.0	6.0	1.1	5206	chr2R	6096739	intron	EcR -	chr2R	6099342	intron	EcR -	chr2R	6101945	intron	EcR -	chr2R_8_6095001	chr2R_6095001	ZS11_1-HE
784	chr2R	6494523	6494553	chr2R	6499286	6499316	F-element	10	4763	4.5	4.0	4.2	1.9	4793	chr2R	6494523	intergenic	not near genes	chr2R	6496920	intergenic	not near genes	chr2R	6499316	intergenic	not near genes	chr2R_10_6495001	chr2R_6495001	ZS11_1-HE
787	chr2R	6579772	6579803	chr2R	6584859	6584890	flea	16	5087	5.0	8.5	6.8	2.1	5118	chr2R	6579772	intron	jing +	chr2R	6582331	intron	jing +	chr2R	6584890	intron	jing +	chr2R_16_6580001	chr2R_6580001	ZS11_1-HE
796	chr2R	6952165	6952181	chr2R	6959746	6959762	opus	7	7581	2.5	4.5	3.5	1.6	7597	chr2R	6952165	intron,intron	mim -,CheB42c -	chr2R	6955964	intron,intron	mim -,CheB42c -	chr2R	6959762	intron,intron	mim -,CheB42c -	chr2R_7_6955001	chr2R_6955001	ZS11_1-HE
799	chr2R	7139944	7139950	chr2R	7141437	7141443	hopper2	5	1493	1.0	8.5	4.8	0.9	1499	chr2R	7139944	intergenic	not near genes	chr2R	7140694	intergenic	not near genes	chr2R	7141443	intergenic	not near genes	chr2R_5_7140001	chr2R_7140001	ZS11_1-HE
802	chr2R	7196566	7196597	chr2R	7201342	7201373	F-element	14	4776	2.5	7.0	4.8	2.4	4807	chr2R	7196566	intron	pk +	chr2R	7198970	intron	pk +	chr2R	7201373	intron	pk +	chr2R_14_7195001	chr2R_7195001	ZS11_1-HE
803	chr2R	7235820	7235845	chr2R	7240913	7240938	jockey	12	5093	4.5	3.5	4.0	2.4	5118	chr2R	7235820	intergenic	not near genes	chr2R	7238379	intergenic	not near genes	chr2R	7240938	intergenic	not near genes	chr2R_12_7235001	chr2R_7235001	ZS11_1-HE
806	chr2R	7434897	7434918	chr2R	7439199	7439220	Juan	5	4302	10.5	6.0	8.2	0.5	4323	chr2R	7434897	intergenic	so +	chr2R	7437058	intergenic	not near genes	chr2R	7439220	intergenic	not near genes	chr2R_5_7435001	chr2R_7435001	ZS11_1-HE
809	chr2R	7608405	7608433	chr2R	7613609	7613637	I-element	18	5204	3.5	0.0	1.8	6.4	5232	chr2R	7608405	intron	CG1358 -	chr2R	7611021	intron	CG1358 -	chr2R	7613637	intron	CG1358 -	chr2R_18_7610001	chr2R_7610001	ZS11_1-HE
815	chr2R	7815679	7815702	chr2R	7822149	7822172	Burdock	4	6470	2.0	2.5	2.2	1.2	6493	chr2R	7815679	intergenic	CG1882 +	chr2R	7818926	intergenic	not near genes	chr2R	7822172	3` UTR	cathD -	chr2R_4_7815001	chr2R_7815001	ZS11_1-HE
816	chr2R	7869187	7869214	chr2R	7873974	7874001	Doc	12	4787	8.0	7.5	7.8	1.4	4814	chr2R	7869187	intron	Dgk -	chr2R	7871594	intron	Dgk -	chr2R	7874001	intron	Dgk -	chr2R_12_7870001	chr2R_7870001	ZS11_1-HE
825	chr2R	8330859	8330893	chr2R	8331346	8331379	roo	28	487	9.0	10.0	9.5	2.7	520	chr2R	8330859	intron	pdm3 +	chr2R	8331119	intron	pdm3 +	chr2R	8331379	intron	pdm3 +	chr2R_28_8330001	chr2R_8330001	ZS11_1-HE
827	chr2R	8398207	8398234	chr2R	8402989	8403016	Doc	10	4781	3.0	4.5	3.8	2.1	4809	chr2R	8398207	intron	CG2121 -	chr2R	8400612	intron	CG2121 -	chr2R	8403016	intron	CG2121 -	chr2R_10_8400001	chr2R_8400001	ZS11_1-HE
842	chr2R	8566032	8566067	chr2R	8566985	8567014	1360	5	948	9.5	0.0	4.8	0.9	982	chr2R	8566032	5` UTR	Cyp6a14 -	chr2R	8566523	5` UTR	Cyp6a14 -	chr2R	8567014	5` UTR	Cyp6a14 -	chr2R_5_8565001	chr2R_8565001	ZS11_1-HE
847	chr2R	8722776	8722788	chr2R	8723012	8723030	pogo	10	240	6.5	9.0	7.8	1.1	254	chr2R	8722776	intron	CG14767 -	chr2R	8722903	intron	CG14767 -	chr2R	8723030	intron	CG14767 -	chr2R_10_8720001	chr2R_8720001	ZS11_1-HE
848	chr2R	8722789	8722795	chr2R	8723010	8723037	pogo	5	238	6.0	8.5	7.2	0.6	248	chr2R	8722789	intron	CG14767 -	chr2R	8722913	intron	CG14767 -	chr2R	8723037	intron	CG14767 -	chr2R_5_8720001	chr2R_8720001	ZS11_1-HE
850	chr2R	8777926	8777946	chr2R	8784131	8784151	diver	13	6205	2.5	6.0	4.2	2.5	6225	chr2R	8777926	intergenic	not near genes	chr2R	8781038	intergenic	not near genes	chr2R	8784151	intergenic	not near genes	chr2R_13_8780001	chr2R_8780001	ZS11_1-HE
857	chr2R	9151315	9151331	chr2R	9157786	9157802	Burdock	5	6471	5.5	4.5	5.0	0.8	6487	chr2R	9151315	3` UTR	CG30345 +	chr2R	9154558	intergenic	not near genes	chr2R	9157802	intergenic	CG8008 -	chr2R_5_9150001	chr2R_9150001	ZS11_1-HE
858	chr2R	9212694	9212726	chr2R	9213181	9213191	roo	12	485	8.5	5.0	6.8	1.5	497	chr2R	9212694	intergenic	CR45309 +	chr2R	9212942	intergenic	CR45309 +	chr2R	9213191	5` UTR	CR45309 +	chr2R_12_9210001	chr2R_9210001	ZS11_1-HE
865	chr2R	9480074	9480105	chr2R	9490606	9490637	roo	15	10532	6.0	3.0	4.5	2.7	10563	chr2R	9480074	intergenic	not near genes	chr2R	9485356	intergenic	not near genes	chr2R	9490637	intergenic	not near genes	chr2R_15_9485001	chr2R_9485001	ZS11_1-HE
872	chr2R	9726606	9726641	chr2R	9734161	9734195	17.6	6	7554	10.0	6.5	8.2	0.7	7589	chr2R	9726606	intron	sqa -	chr2R	9730400	intron	sqa -	chr2R	9734195	intron	sqa -	chr2R_6_9730001	chr2R_9730001	ZS11_1-HE
874	chr2R	9871039	9871071	chr2R	9871526	9871558	roo	6	487	3.5	6.0	4.8	1.0	519	chr2R	9871039	intron	cbx -	chr2R	9871298	intron	cbx -	chr2R	9871558	intron,5` UTR	cbx -,CG18446 +	chr2R_6_9870001	chr2R_9870001	ZS11_1-HE
875	chr2R	9945431	9945465	chr2R	9945628	9945662	BS	19	197	5.0	4.5	4.8	3.3	231	chr2R	9945431	intron	Mef2 -	chr2R	9945546	intron	Mef2 -	chr2R	9945662	intron	Mef2 -	chr2R_19_9945001	chr2R_9945001	ZS11_1-HE
876	chr2R	10005855	10005865	chr2R	10007021	10007031	1360	5	1166	9.0	4.5	6.8	0.6	1176	chr2R	10005855	intron	Pka-R2 -	chr2R	10006443	intron	Pka-R2 -	chr2R	10007031	intron	Pka-R2 -	chr2R_5_10005001	chr2R_10005001	ZS11_1-HE
883	chr2R	10176880	10176912	chr2R	10186047	10186080	roo	22	9168	6.5	5.5	6.0	3.1	9200	chr2R	10176880	intron	KCNQ -	chr2R	10181480	intron	KCNQ -	chr2R	10186080	intron	KCNQ -	chr2R_22_10180001	chr2R_10180001	ZS11_1-HE
902	chr2R	10585574	10585591	chr2R	10594158	10594175	Tirant	15	8583	5.0	8.0	6.5	2.0	8601	chr2R	10585574	intron	psq +	chr2R	10589874	intron	psq +	chr2R	10594175	intron	psq +	chr2R_15_10585001	chr2R_10585001	ZS11_1-HE
917	chr2R	10948045	10948062	chr2R	10955597	10955614	17.6	9	7552	0.0	6.5	3.2	2.1	7569	chr2R	10948045	intergenic	not near genes	chr2R	10951830	intergenic	not near genes	chr2R	10955614	intergenic	not near genes	chr2R_9_10950001	chr2R_10950001	ZS11_1-HE
920	chr2R	10979658	10979685	chr2R	10980129	10980156	297	10	471	1.5	5.0	3.2	2.4	498	chr2R	10979658	intergenic	not near genes	chr2R	10979907	intergenic	not near genes	chr2R	10980156	intergenic	not near genes	chr2R_10_10975001	chr2R_10975001	ZS11_1-HE
922	chr2R	11009811	11009844	chr2R	11018986	11019019	roo	14	9175	4.5	7.0	5.8	2.1	9208	chr2R	11009811	intron	luna -	chr2R	11014415	intron	luna -	chr2R	11019019	intron	luna -	chr2R_14_11010001	chr2R_11010001	ZS11_1-HE
923	chr2R	11019875	11019881	chr2R	11024942	11024948	jockey	5	5067	10.0	6.0	8.0	0.6	5073	chr2R	11019875	intron	luna -	chr2R	11022412	intron	luna -	chr2R	11024948	intron	luna -	chr2R_5_11020001	chr2R_11020001	ZS11_1-HE
924	chr2R	11019883	11019910	chr2R	11024941	11024977	jockey	16	5063	5.0	5.0	5.0	2.7	5094	chr2R	11019883	intron	luna -	chr2R	11022430	intron	luna -	chr2R	11024977	intron	luna -	chr2R_16_11020001	chr2R_11020001	ZS11_1-HE
929	chr2R	11207812	11207847	chr2R	11208005	11208040	BS	30	193	10.5	7.5	9.0	3.0	228	chr2R	11207812	intron	shn +	chr2R	11207926	intron	shn +	chr2R	11208040	intron	shn +	chr2R_30_11205001	chr2R_11205001	ZS11_1-HE
937	chr2R	11415516	11415551	chr2R	11418666	11418701	opus	17	3150	5.0	6.5	5.8	2.5	3185	chr2R	11415516	intron	Drip -	chr2R	11417108	intron	Drip -	chr2R	11418701	intron	Drip -	chr2R_17_11415001	chr2R_11415001	ZS11_1-HE
939	chr2R	11472646	11472680	chr2R	11473844	11473878	pogo	14	1198	2.0	6.0	4.0	2.8	1232	chr2R	11472646	intergenic	not near genes	chr2R	11473262	intergenic	not near genes	chr2R	11473878	intergenic	not near genes	chr2R_14_11470001	chr2R_11470001	ZS11_1-HE
968	chr2R	12481146	12481170	chr2R	12482944	12482972	roo	11	1803	4.5	7.0	5.8	1.6	1826	chr2R	12481146	exon	Dh44-R2 +	chr2R	12482059	intron	Dh44-R2 +	chr2R	12482972	intron	Dh44-R2 +	chr2R_11_12480001	chr2R_12480001	ZS11_1-HE
970	chr2R	12501691	12501723	chr2R	12503854	12503886	Rt1c	10	2162	2.5	1.5	2.0	3.3	2195	chr2R	12501691	intron	fdl -	chr2R	12502788	intron	fdl -	chr2R	12503886	intron	fdl -	chr2R_10_12500001	chr2R_12500001	ZS11_1-HE
977	chr2R	12707518	12707545	chr2R	12715885	12715912	roo	13	8367	5.0	5.0	5.0	2.2	8394	chr2R	12707518	intron	CG42663 +	chr2R	12711715	intron	CG42663 +	chr2R	12715912	intron	CG42663 +	chr2R_13_12710001	chr2R_12710001	ZS11_1-HE
982	chr2R	12789291	12789328	chr2R	12797655	12797692	roo	21	8362	4.5	7.0	5.8	3.1	8401	chr2R	12789291	intron,3` UTR	sca +,CR45137 -	chr2R	12793492	intron,intron	sca +,CR45137 -	chr2R	12797692	intron,3` UTR	sca +,CR45137 -	chr2R_21_12790001	chr2R_12790001	ZS11_1-HE
983	chr2R	12819443	12819479	chr2R	12824513	12824549	jockey	12	5070	7.5	6.0	6.8	1.5	5106	chr2R	12819443	intergenic	not near genes	chr2R	12821996	intergenic	not near genes	chr2R	12824549	intergenic	not near genes	chr2R_12_12820001	chr2R_12820001	ZS11_1-HE
993	chr2R	13136842	13136869	chr2R	13141641	13141668	Doc	7	4799	2.5	6.0	4.2	1.3	4826	chr2R	13136842	exon	Cap-G +	chr2R	13139255	intron	Cap-G +	chr2R	13141668	intron	Cap-G +	chr2R_7_13135001	chr2R_13135001	ZS11_1-HE
1002	chr2R	13580497	13580530	chr2R	13580848	13580881	jockey	13	351	0.5	4.0	2.2	4.1	384	chr2R	13580497	3` UTR	CG6191 -	chr2R	13580689	3` UTR,3` UTR	CG6191 -,CG45088 -	chr2R	13580881	3` UTR,3` UTR	CG6191 -,CG45088 -	chr2R_13_13580001	chr2R_13580001	ZS11_1-HE
1024	chr2R	14394243	14394250	chr2R	14399033	14399034	Doc	4	4788	6.5	0.5	3.5	0.9	4791	chr2R	14394243	intergenic	not near genes	chr2R	14396638	intergenic	not near genes	chr2R	14399034	intergenic	not near genes	chr2R_4_14395001	chr2R_14395001	ZS11_1-HE
1027	chr2R	14497386	14497420	chr2R	14498552	14498584	1360	28	1166	4.5	8.0	6.2	3.9	1198	chr2R	14497386	3` UTR	Cpsf160 -	chr2R	14497985	intron	Cpsf160 -	chr2R	14498584	3` UTR	Cpsf160 -	chr2R_28_14495001	chr2R_14495001	ZS11_1-HE
1037	chr2R	14889216	14889235	chr2R	14897825	14897844	Max-element	9	8609	2.0	0.0	1.0	4.5	8628	chr2R	14889216	intergenic	Cyp6a8 -	chr2R	14893530	intergenic	not near genes	chr2R	14897844	intergenic	not near genes	chr2R_9_14890001	chr2R_14890001	ZS11_1-HE
1040	chr2R	15004724	15004763	chr2R	15005054	15005093	jockey	20	330	4.0	0.0	2.0	6.7	369	chr2R	15004724	intergenic	not near genes	chr2R	15004908	intergenic	not near genes	chr2R	15005093	intergenic	not near genes	chr2R_20_15000001	chr2R_15000001	ZS11_1-HE
1041	chr2R	15015454	15015487	chr2R	15022879	15022912	mdg1	22	7424	6.5	5.0	5.8	3.2	7458	chr2R	15015454	intron	hbs +	chr2R	15019183	intron	hbs +	chr2R	15022912	intron	hbs +	chr2R_22_15015001	chr2R_15015001	ZS11_1-HE
1042	chr2R	15084977	15085008	chr2R	15092027	15092058	297	14	7050	6.5	3.5	5.0	2.3	7081	chr2R	15084977	intergenic	not near genes	chr2R	15088518	intergenic	not near genes	chr2R	15092058	5` UTR	CR44457 +	chr2R_14_15085001	chr2R_15085001	ZS11_1-HE
1045	chr2R	15119316	15119349	chr2R	15127798	15127831	Tirant	16	8482	12.0	10.0	11.0	1.3	8515	chr2R	15119316	intron	chn +	chr2R	15123574	intron	chn +	chr2R	15127831	intron	chn +	chr2R_16_15120001	chr2R_15120001	ZS11_1-HE
1095	chr2R	17176369	17176379	chr2R	17182560	17182570	diver	5	6191	0.0	4.0	2.0	1.7	6201	chr2R	17176369	intergenic	not near genes	chr2R	17179470	intergenic	not near genes	chr2R	17182570	intergenic	not near genes	chr2R_5_17175001	chr2R_17175001	ZS11_1-HE
1097	chr2R	17236510	17236524	chr2R	17241715	17241729	copia	10	5205	2.5	5.5	4.0	2.0	5219	chr2R	17236510	intron	mbl +	chr2R	17239120	intron	mbl +	chr2R	17241729	intron	mbl +	chr2R_10_17235001	chr2R_17235001	ZS11_1-HE
1098	chr2R	17236525	17236542	chr2R	17241713	17241741	copia	13	5202	1.5	5.0	3.2	3.1	5216	chr2R	17236525	intron	mbl +	chr2R	17239133	intron	mbl +	chr2R	17241741	intron	mbl +	chr2R_13_17235001	chr2R_17235001	ZS11_1-HE
1104	chr2R	17485915	17485940	chr2R	17490678	17490703	F-element	12	4763	6.5	3.0	4.8	2.1	4788	chr2R	17485915	5` UTR,intron	CG43110 -,NT5E-2 +	chr2R	17488309	intron	NT5E-2 +	chr2R	17490703	intron	NT5E-2 +	chr2R_12_17485001	chr2R_17485001	ZS11_1-HE
1110	chr2R	17782361	17782391	chr2R	17783565	17783595	pogo	13	1204	5.5	3.5	4.5	2.4	1234	chr2R	17782361	intergenic	CG33981 -,fab1 -	chr2R	17782978	intergenic	not near genes	chr2R	17783595	intergenic	mir-31a -	chr2R_13_17780001	chr2R_17780001	ZS11_1-HE
1111	chr2R	17784026	17784053	chr2R	17784266	17784295	pogo	10	241	5.0	4.5	4.8	1.7	269	chr2R	17784026	intergenic	mir-31a -	chr2R	17784160	intergenic	mir-31a -	chr2R	17784295	intergenic	mir-31a -	chr2R_10_17780001	chr2R_17780001	ZS11_1-HE
1122	chr2R	18045669	18045678	chr2R	18046022	18046031	jockey	9	353	7.5	4.5	6.0	1.3	362	chr2R	18045669	intergenic	not near genes	chr2R	18045850	intergenic	not near genes	chr2R	18046031	intergenic	CG5767 -	chr2R_9_18045001	chr2R_18045001	ZS11_1-HE
1123	chr2R	18045679	18045689	chr2R	18046021	18046042	jockey	5	351	5.5	4.5	5.0	0.8	363	chr2R	18045679	intergenic	not near genes	chr2R	18045860	intergenic	not near genes	chr2R	18046042	intergenic	CG5767 -	chr2R_5_18045001	chr2R_18045001	ZS11_1-HE
1125	chr2R	18111690	18111714	chr2R	18115558	18115583	F-element	11	3869	7.0	7.0	7.0	1.4	3893	chr2R	18111690	intergenic	not near genes	chr2R	18113636	intergenic	not near genes	chr2R	18115583	intergenic	not near genes	chr2R_11_18110001	chr2R_18110001	ZS11_1-HE
1131	chr2R	18358390	18358420	chr2R	18372603	18372633	roo	12	14213	5.5	0.5	3.0	3.0	14243	chr2R	18358390	intergenic	not near genes	chr2R	18365512	intergenic	not near genes	chr2R	18372633	intergenic	not near genes	chr2R_12_18365001	chr2R_18365001	ZS11_1-HE
1136	chr2R	18575795	18575831	chr2R	18581983	18582020	3S18	18	6185	4.0	3.0	3.5	4.0	6225	chr2R	18575795	intron	GEFmeso -	chr2R	18578908	intron	GEFmeso -	chr2R	18582020	intron	GEFmeso -	chr2R_18_18575001	chr2R_18575001	ZS11_1-HE
1137	chr2R	18590866	18590898	chr2R	18600018	18600051	roo	8	9153	2.0	3.0	2.5	2.3	9185	chr2R	18590866	intron	GEFmeso -	chr2R	18595458	intron	GEFmeso -	chr2R	18600051	intron	GEFmeso -	chr2R_8_18595001	chr2R_18595001	ZS11_1-HE
1161	chr2R	19776593	19776627	chr2R	19779917	19779951	jockey	9	3324	4.0	4.5	4.2	1.7	3358	chr2R	19776593	intergenic	not near genes	chr2R	19778272	intergenic	not near genes	chr2R	19779951	intergenic	not near genes	chr2R_9_19775001	chr2R_19775001	ZS11_1-HE
1165	chr2R	19957434	19957463	chr2R	19962632	19962663	copia	13	5200	3.0	5.0	4.0	2.6	5229	chr2R	19957434	intergenic	CG44623 +	chr2R	19960048	intergenic	not near genes	chr2R	19962663	intergenic	not near genes	chr2R_13_19960001	chr2R_19960001	ZS11_1-HE
1169	chr2R	20069247	20069275	chr2R	20071872	20071905	opus	5	2629	0.0	0.5	0.2	4.2	2658	chr2R	20069247	intergenic	not near genes	chr2R	20070576	intergenic	not near genes	chr2R	20071905	intergenic	not near genes	chr2R_5_20070001	chr2R_20070001	ZS11_1-HE
1190	chr2R	20739439	20739475	chr2R	20744208	20744244	F-element	12	4768	3.5	8.0	5.8	1.8	4805	chr2R	20739439	intron	dpr +	chr2R	20741842	intron	dpr +	chr2R	20744244	intron	dpr +	chr2R_12_20740001	chr2R_20740001	ZS11_1-HE
1220	chr2R	21738275	21738311	chr2R	21747436	21747472	roo	27	9157	4.5	8.0	6.2	3.8	9197	chr2R	21738275	intergenic	not near genes	chr2R	21742874	intergenic	not near genes	chr2R	21747472	intergenic	not near genes	chr2R_27_21740001	chr2R_21740001	ZS11_1-HE
1221	chr2R	21753081	21753116	chr2R	21753567	21753602	roo	31	486	14.0	15.0	14.5	2.0	521	chr2R	21753081	intergenic	not near genes	chr2R	21753342	intergenic	not near genes	chr2R	21753602	intergenic	not near genes	chr2R_31_21750001	chr2R_21750001	ZS11_1-HE
1225	chr2R	21809526	21809558	chr2R	21817767	21817799	roo	14	8241	5.0	9.0	7.0	1.8	8273	chr2R	21809526	intergenic	not near genes	chr2R	21813662	intergenic	not near genes	chr2R	21817799	intergenic	not near genes	chr2R_14_21810001	chr2R_21810001	ZS11_1-HE
1240	chr2R	22349687	22349725	chr2R	22351472	22351510	jockey	22	1785	5.5	8.0	6.8	2.8	1823	chr2R	22349687	intron	Liprin-gamma -	chr2R	22350598	intron	Liprin-gamma -	chr2R	22351510	intron	Liprin-gamma -	chr2R_22_22350001	chr2R_22350001	ZS11_1-HE
1242	chr2R	22360377	22360391	chr2R	22360811	22360825	jockey	14	434	13.0	5.0	9.0	1.4	448	chr2R	22360377	intron	Liprin-gamma -	chr2R	22360601	intron	Liprin-gamma -	chr2R	22360825	intron	Liprin-gamma -	chr2R_14_22360001	chr2R_22360001	ZS11_1-HE
1243	chr2R	22465316	22465349	chr2R	22465510	22465549	BS	7	195	0.0	4.5	2.2	2.2	233	chr2R	22465316	intron	CG10384 +	chr2R	22465432	intron	CG10384 +	chr2R	22465549	intron	CG10384 +	chr2R_7_22465001	chr2R_22465001	ZS11_1-HE
1245	chr2R	22525744	22525786	chr2R	22529300	22529326	jockey	15	3551	1.5	4.5	3.0	3.8	3582	chr2R	22525744	intron	px -	chr2R	22527535	intron	px -	chr2R	22529326	intron	px -	chr2R_15_22525001	chr2R_22525001	ZS11_1-HE
1249	chr2R	22774959	22774998	chr2R	22775379	22775418	jockey	26	420	9.0	7.5	8.2	2.8	459	chr2R	22774959	intron	CG42260 -	chr2R	22775188	intron	CG42260 -	chr2R	22775418	intron	CG42260 -	chr2R_26_22775001	chr2R_22775001	ZS11_1-HE
1254	chr2R	22843025	22843052	chr2R	22844987	22845015	flea	13	1963	5.0	6.0	5.5	2.0	1990	chr2R	22843025	intergenic	CG9826 +	chr2R	22844020	intergenic	not near genes	chr2R	22845015	intergenic	not near genes	chr2R_13_22840001	chr2R_22840001	ZS11_1-HE
1274	chr2R	23529580	23529604	chr2R	23537157	23537165	412	4	7572	2.0	4.5	3.2	1.0	7585	chr2R	23529580	intron	bw -	chr2R	23533372	intron	bw -	chr2R	23537165	exon	bw -	chr2R_4_23530001	chr2R_23530001	ZS11_1-HE
1283	chr2R	24147067	24147082	chr2R	24154646	24154661	412	4	7578	8.0	9.0	8.5	0.4	7594	chr2R	24147067	intron	Dat +	chr2R	24150864	intron	Dat +	chr2R	24154661	intron	Dat +	chr2R_4_24150001	chr2R_24150001	ZS11_1-HE
1284	chr2R	24147084	24147098	chr2R	24154644	24154677	412	6	7575	4.5	9.0	6.8	0.8	7593	chr2R	24147084	intron	Dat +	chr2R	24150880	intron	Dat +	chr2R	24154677	intron	Dat +	chr2R_6_24150001	chr2R_24150001	ZS11_1-HE
1285	chr2R	24177234	24177267	chr2R	24184720	24184732	412	12	7484	4.0	3.0	3.5	2.7	7498	chr2R	24177234	3` UTR	Nop60B +	chr2R	24180983	intron	Nop60B +	chr2R	24184732	3` UTR	Nop60B +	chr2R_12_24180001	chr2R_24180001	ZS11_1-HE
1289	chr2R	24353426	24353461	chr2R	24361789	24361824	roo	11	8363	1.5	3.5	2.5	3.1	8398	chr2R	24353426	intron,intron	bs +,CR44811 -	chr2R	24357625	intron,intron	bs +,CR44811 -	chr2R	24361824	intron,intron	bs +,CR44811 -	chr2R_11_24355001	chr2R_24355001	ZS11_1-HE
1291	chr2R	24647587	24647614	chr2R	24655145	24655172	412	13	7558	3.0	3.5	3.2	3.1	7585	chr2R	24647587	intergenic	not near genes	chr2R	24651380	intergenic	not near genes	chr2R	24655172	intergenic	not near genes	chr2R_13_24650001	chr2R_24650001	ZS11_1-HE
1293	chr2R	24727882	24727914	chr2R	24735391	24735423	mdg1	11	7508	3.5	6.0	4.8	1.9	7541	chr2R	24727882	intron	Mid1 -	chr2R	24731652	intron	Mid1 -	chr2R	24735423	intron	Mid1 -	chr2R_11_24730001	chr2R_24730001	ZS11_1-HE
1294	chr2R	24763611	24763644	chr2R	24765588	24765621	G2	11	1975	2.5	4.0	3.2	2.6	2010	chr2R	24763611	exon	CG3894 +	chr2R	24764616	intron	CG3894 +	chr2R	24765621	exon	CG3894 +	chr2R_11_24760001	chr2R_24760001	ZS11_1-HE
1300	chr2R	25141647	25141682	chr2R	25159338	25159373	roo	17	17691	7.5	6.5	7.0	2.1	17726	chr2R	25141647	intergenic	not near genes	chr2R	25150510	intergenic	not near genes	chr2R	25159373	intergenic	not near genes	chr2R_17_25150001	chr2R_25150001	ZS11_1-HE
1305	chr3L	110209	110242	chr3L	119377	119410	roo	10	9168	8.5	5.5	7.0	1.2	9201	chr3L	110209	intergenic	not near genes	chr3L	114810	intergenic	not near genes	chr3L	119410	intergenic	not near genes	chr3L_10_110001	chr3L_110001	ZS11_1-HE
1308	chr3L	402686	402718	chr3L	409740	409772	297	45	7053	16.0	11.5	13.8	3.0	7086	chr3L	402686	intergenic	not near genes	chr3L	406229	intergenic	not near genes	chr3L	409772	intergenic	not near genes	chr3L_45_405001	chr3L_405001	ZS11_1-HE
1323	chr3L	858010	858018	chr3L	866492	866500	Tirant	4	8482	6.5	10.0	8.2	0.4	8490	chr3L	858010	intergenic	not near genes	chr3L	862255	intergenic	not near genes	chr3L	866500	5` UTR	CG12502 +	chr3L_4_860001	chr3L_860001	ZS11_1-HE
1325	chr3L	925199	925209	chr3L	932659	932669	mdg1	8	7460	5.5	3.0	4.2	1.5	7470	chr3L	925199	intron	Glut1 +	chr3L	928934	intron	Glut1 +	chr3L	932669	intron	Glut1 +	chr3L_8_925001	chr3L_925001	ZS11_1-HE
1328	chr3L	939770	939802	chr3L	940892	940908	jockey	26	1121	10.0	9.0	9.5	2.5	1138	chr3L	939770	intron	Glut1 +	chr3L	940339	intron	Glut1 +	chr3L	940908	intron	Glut1 +	chr3L_26_940001	chr3L_940001	ZS11_1-HE
1331	chr3L	1047378	1047384	chr3L	1055171	1055197	412	5	7800	2.0	0.5	1.2	2.3	7819	chr3L	1047378	intron	bab1 -	chr3L	1051288	intron	bab1 -	chr3L	1055197	intron	bab1 -	chr3L_5_1050001	chr3L_1050001	ZS11_1-HE
1334	chr3L	1154134	1154162	chr3L	1163285	1163313	roo	11	9151	3.5	4.0	3.8	2.3	9179	chr3L	1154134	intron	bab2 -	chr3L	1158724	intron	bab2 -	chr3L	1163313	intron	bab2 -	chr3L_11_1155001	chr3L_1155001	ZS11_1-HE
1335	chr3L	1219612	1219619	chr3L	1227334	1227353	412	4	7731	2.5	4.0	3.2	1.0	7741	chr3L	1219612	intron	mwh +	chr3L	1223482	intron	mwh +	chr3L	1227353	intron	mwh +	chr3L_4_1220001	chr3L_1220001	ZS11_1-HE
1349	chr3L	1506000	1506032	chr3L	1513598	1513630	17.6	19	7597	4.0	6.0	5.0	3.2	7630	chr3L	1506000	intron,intron	Psa +,cue -	chr3L	1509815	intron,intron	Psa +,cue -	chr3L	1513630	intron,intron	Psa +,cue -	chr3L_19_1505001	chr3L_1505001	ZS11_1-HE
1358	chr3L	1740854	1740883	chr3L	1741098	1741127	pogo	6	244	2.5	4.0	3.2	1.4	273	chr3L	1740854	intron	Gk +	chr3L	1740990	intron	Gk +	chr3L	1741127	intron	Gk +	chr3L_6_1740001	chr3L_1740001	ZS11_1-HE
1373	chr3L	2447502	2447537	chr3L	2456659	2456694	roo	12	9157	0.5	5.0	2.8	3.2	9192	chr3L	2447502	intron	CG45186 +	chr3L	2452098	intron	CG45186 +	chr3L	2456694	intron	CG45186 +	chr3L_12_2450001	chr3L_2450001	ZS11_1-HE
1387	chr3L	2927837	2927871	chr3L	2936115	2936148	Tirant	27	8278	10.5	7.5	9.0	2.7	8311	chr3L	2927837	intron	Shab +	chr3L	2931992	intron	Shab +	chr3L	2936148	intron	Shab +	chr3L_27_2930001	chr3L_2930001	ZS11_1-HE
1391	chr3L	3040334	3040356	chr3L	3042124	3042146	S-element	7	1790	2.0	1.5	1.8	2.5	1812	chr3L	3040334	3` UTR	CG2162 +	chr3L	3041240	intergenic	not near genes	chr3L	3042146	intergenic	Jafrac2 +	chr3L_7_3040001	chr3L_3040001	ZS11_1-HE
1392	chr3L	3051742	3051757	chr3L	3051985	3052000	pogo	5	243	8.0	1.5	4.8	0.9	258	chr3L	3051742	3` UTR	CG32485 +	chr3L	3051871	intergenic	CG32485 +	chr3L	3052000	intergenic	CG32485 +	chr3L_5_3050001	chr3L_3050001	ZS11_1-HE
1393	chr3L	3061282	3061317	chr3L	3069866	3069901	Tirant	24	8583	6.5	15.5	11.0	2.0	8619	chr3L	3061282	intron	CG32486 -	chr3L	3065592	intron	CG32486 -	chr3L	3069901	intron	CG32486 -	chr3L_24_3065001	chr3L_3065001	ZS11_1-HE
1398	chr3L	3281437	3281476	chr3L	3281932	3281973	Doc	21	496	1.0	11.0	6.0	3.0	536	chr3L	3281437	intron	CG12017 +	chr3L	3281705	intron	CG12017 +	chr3L	3281973	intron	CG12017 +	chr3L_21_3280001	chr3L_3280001	ZS11_1-HE
1406	chr3L	3475074	3475113	chr3L	3475519	3475558	jockey	20	445	4.0	8.0	6.0	2.9	484	chr3L	3475074	intron	CG42324 +	chr3L	3475316	intron	CG42324 +	chr3L	3475558	intron	CG42324 +	chr3L_20_3475001	chr3L_3475001	ZS11_1-HE
1409	chr3L	3601298	3601332	chr3L	3606610	3606644	copia	13	5311	4.5	0.0	2.2	4.1	5346	chr3L	3601298	intron	Eip63E +	chr3L	3603971	intron	Eip63E +	chr3L	3606644	intron	Eip63E +	chr3L_13_3600001	chr3L_3600001	ZS11_1-HE
1420	chr3L	3833736	3833769	chr3L	3833978	3834011	pogo	22	242	12.0	9.0	10.5	1.9	275	chr3L	3833736	intron	enc +	chr3L	3833874	intron	enc +	chr3L	3834011	intron	enc +	chr3L_22_3830001	chr3L_3830001	ZS11_1-HE
1432	chr3L	4328754	4328765	chr3L	4336252	4336263	412	9	7498	8.0	9.5	8.8	0.9	7509	chr3L	4328754	intron	Cip4 -	chr3L	4332508	intron	Cip4 -	chr3L	4336263	intron	Cip4 -	chr3L_9_4330001	chr3L_4330001	ZS11_1-HE
1444	chr3L	4901122	4901156	chr3L	4907313	4907347	diver	17	6191	4.0	0.5	2.2	5.3	6225	chr3L	4901122	intergenic	CG13704 +	chr3L	4904234	intergenic	not near genes	chr3L	4907347	intergenic	not near genes	chr3L_17_4900001	chr3L_4900001	ZS11_1-HE
1452	chr3L	5034155	5034184	chr3L	5043308	5043337	roo	12	9153	8.5	3.0	5.8	1.8	9182	chr3L	5034155	intron	Con -	chr3L	5038746	intron	Con -	chr3L	5043337	intron	Con -	chr3L_12_5035001	chr3L_5035001	ZS11_1-HE
1453	chr3L	5045454	5045487	chr3L	5050236	5050269	Doc	21	4782	7.0	6.0	6.5	2.8	4815	chr3L	5045454	intron	Con -	chr3L	5047862	intron	Con -	chr3L	5050269	intron	Con -	chr3L_21_5045001	chr3L_5045001	ZS11_1-HE
1475	chr3L	5537718	5537751	chr3L	5538061	5538093	jockey	11	341	2.0	2.5	2.2	3.4	375	chr3L	5537718	intergenic	not near genes	chr3L	5537906	intergenic	not near genes	chr3L	5538093	intergenic	CG10625 -	chr3L_11_5535001	chr3L_5535001	ZS11_1-HE
1488	chr3L	5910036	5910057	chr3L	5910278	5910299	pogo	13	242	7.5	0.5	4.0	2.6	263	chr3L	5910036	intron	CG13288 +	chr3L	5910168	intron	CG13288 +	chr3L	5910299	intron	CG13288 +	chr3L_13_5910001	chr3L_5910001	ZS11_1-HE
1489	chr3L	5926317	5926351	chr3L	5926508	5926534	BS	16	189	4.0	6.5	5.2	2.6	217	chr3L	5926317	intron	Vap-33B +	chr3L	5926426	intron	Vap-33B +	chr3L	5926534	intron	Vap-33B +	chr3L_16_5925001	chr3L_5925001	ZS11_1-HE
1492	chr3L	6001679	6001717	chr3L	6004380	6004418	jockey	20	2701	4.0	0.5	2.2	6.2	2739	chr3L	6001679	intron	PVRAP +	chr3L	6003048	intron	PVRAP +	chr3L	6004418	intron	PVRAP +	chr3L_20_6000001	chr3L_6000001	ZS11_1-HE
1494	chr3L	6040378	6040393	chr3L	6042743	6042758	Doc	4	2365	2.0	5.0	3.5	0.9	2380	chr3L	6040378	intergenic	Jon65Aiv +	chr3L	6041568	intergenic	not near genes	chr3L	6042758	intergenic	not near genes	chr3L_4_6040001	chr3L_6040001	ZS11_1-HE
1499	chr3L	6220911	6220945	chr3L	6230064	6230098	roo	10	9153	3.0	4.0	3.5	2.2	9187	chr3L	6220911	5` UTR	pncr008:3L +	chr3L	6225504	intergenic	not near genes	chr3L	6230098	intergenic	not near genes	chr3L_10_6225001	chr3L_6225001	ZS11_1-HE
1502	chr3L	6335009	6335039	chr3L	6335481	6335511	297	14	472	5.5	4.5	5.0	2.3	502	chr3L	6335009	intron	CG13300 -	chr3L	6335260	intron	CG13300 -	chr3L	6335511	intron	CG13300 -	chr3L_14_6335001	chr3L_6335001	ZS11_1-HE
1503	chr3L	6405656	6405690	chr3L	6432121	6432155	roo	16	26465	4.0	7.5	5.8	2.4	26499	chr3L	6405656	intron	CG42747 +	chr3L	6418906	intron	CG42747 +	chr3L	6432155	intron	CG42747 +	chr3L_16_6415001	chr3L_6415001	ZS11_1-HE
1512	chr3L	6781124	6781142	chr3L	6783138	6783156	Doc	15	2014	8.0	0.0	4.0	3.0	2032	chr3L	6781124	intergenic	not near genes	chr3L	6782140	intergenic	not near genes	chr3L	6783156	intergenic	not near genes	chr3L_15_6780001	chr3L_6780001	ZS11_1-HE
1515	chr3L	6855919	6855953	chr3L	6860703	6860737	Doc	18	4783	5.5	3.5	4.5	3.3	4818	chr3L	6855919	intergenic	not near genes	chr3L	6858328	intergenic	not near genes	chr3L	6860737	intergenic	not near genes	chr3L_18_6855001	chr3L_6855001	ZS11_1-HE
1516	chr3L	6887514	6887550	chr3L	6895007	6895043	roo	25	7493	5.0	6.0	5.5	3.8	7529	chr3L	6887514	intergenic	not near genes	chr3L	6891278	intergenic	not near genes	chr3L	6895043	intergenic	not near genes	chr3L_25_6890001	chr3L_6890001	ZS11_1-HE
1525	chr3L	6994885	6994917	chr3L	6995497	6995529	BS	22	612	0.0	4.0	2.0	7.3	644	chr3L	6994885	intergenic	bin +	chr3L	6995207	intergenic	not near genes	chr3L	6995529	intergenic	not near genes	chr3L_22_6995001	chr3L_6995001	ZS11_1-HE
1541	chr3L	7377316	7377328	chr3L	7380422	7380434	297	7	3106	2.5	4.5	3.5	1.6	3118	chr3L	7377316	intron	SMSr -	chr3L	7378875	intron	SMSr -	chr3L	7380434	intron	SMSr -	chr3L_7_7375001	chr3L_7375001	ZS11_1-HE
1543	chr3L	7498756	7498788	chr3L	7503534	7503566	F-element	20	4778	6.5	6.0	6.2	2.8	4810	chr3L	7498756	5` UTR	CG8539 -	chr3L	7501161	intergenic	not near genes	chr3L	7503566	intergenic	not near genes	chr3L_20_7500001	chr3L_7500001	ZS11_1-HE
1552	chr3L	7793709	7793742	chr3L	7800762	7800795	297	23	7053	8.0	9.0	8.5	2.4	7086	chr3L	7793709	intron	CG32369 -	chr3L	7797252	intron	CG32369 -	chr3L	7800795	intron	CG32369 -	chr3L_23_7795001	chr3L_7795001	ZS11_1-HE
1557	chr3L	7886511	7886545	chr3L	7889030	7889064	Stalker4	22	2519	4.0	5.5	4.8	3.8	2553	chr3L	7886511	intron	CG32365 +	chr3L	7887788	intron	CG32365 +	chr3L	7889064	intron	CG32365 +	chr3L_22_7885001	chr3L_7885001	ZS11_1-HE
1559	chr3L	7916829	7916860	chr3L	7926001	7926032	roo	10	9171	5.5	4.5	5.0	1.7	9203	chr3L	7916829	3` UTR	syd -	chr3L	7921430	intron	syd -	chr3L	7926032	3` UTR	syd -	chr3L_10_7920001	chr3L_7920001	ZS11_1-HE
1561	chr3L	7985378	7985398	chr3L	7987708	7987728	NOF	9	2330	6.0	8.0	7.0	1.1	2350	chr3L	7985378	intron	nmo +	chr3L	7986553	intron	nmo +	chr3L	7987728	intron	nmo +	chr3L_9_7985001	chr3L_7985001	ZS11_1-HE
1562	chr3L	8019696	8019737	chr3L	8024111	8024152	NOF	9	4413	1.0	2.0	1.5	3.6	4456	chr3L	8019696	intron	nmo +	chr3L	8021924	intron	nmo +	chr3L	8024152	intron	nmo +	chr3L_9_8020001	chr3L_8020001	ZS11_1-HE
1567	chr3L	8233590	8233594	chr3L	8238853	8238857	Rt1a	6	5263	5.0	21.5	13.2	0.4	5267	chr3L	8233590	intron	CG7213 -	chr3L	8236224	intron	CG7213 -	chr3L	8238857	intron,intron	CG7213 -,Dscam4 +	chr3L_6_8235001	chr3L_8235001	ZS11_1-HE
1582	chr3L	8791277	8791291	chr3L	8796698	8796712	I-element	8	5421	5.5	0.0	2.8	2.1	5435	chr3L	8791277	exon	Fhos +	chr3L	8793994	intron	Fhos +	chr3L	8796712	intron	Fhos +	chr3L_8_8790001	chr3L_8790001	ZS11_1-HE
1586	chr3L	9076924	9076955	chr3L	9084485	9084516	412	20	7561	4.5	8.5	6.5	2.7	7592	chr3L	9076924	exon	Tequila +	chr3L	9080720	intron	Tequila +	chr3L	9084516	exon	Tequila +	chr3L_20_9080001	chr3L_9080001	ZS11_1-HE
1588	chr3L	9130556	9130580	chr3L	9134317	9134342	412	11	3760	9.5	6.5	8.0	1.2	3786	chr3L	9130556	intergenic	bol -	chr3L	9132449	intergenic	not near genes	chr3L	9134342	intergenic	Dhpr +	chr3L_11_9130001	chr3L_9130001	ZS11_1-HE
1590	chr3L	9164694	9164731	chr3L	9166162	9166199	hobo	22	1468	7.0	4.0	5.5	3.4	1505	chr3L	9164694	intron	Rdl -	chr3L	9165446	intron	Rdl -	chr3L	9166199	intron	Rdl -	chr3L_22_9165001	chr3L_9165001	ZS11_1-HE
1591	chr3L	9219247	9219258	chr3L	9219920	9219931	jockey	9	673	9.5	7.0	8.2	1.0	684	chr3L	9219247	intergenic	not near genes	chr3L	9219589	intergenic	not near genes	chr3L	9219931	intergenic	not near genes	chr3L_9_9215001	chr3L_9215001	ZS11_1-HE
1592	chr3L	9219259	9219275	chr3L	9219910	9219948	jockey	10	667	5.5	6.5	6.0	1.4	689	chr3L	9219259	intergenic	not near genes	chr3L	9219604	intergenic	not near genes	chr3L	9219948	intergenic	not near genes	chr3L_10_9215001	chr3L_9215001	ZS11_1-HE
1593	chr3L	9270614	9270650	chr3L	9278370	9278404	roo	7	7756	3.5	3.0	3.2	1.7	7790	chr3L	9270614	intron	GluRIB +	chr3L	9274509	intron	GluRIB +	chr3L	9278404	exon	GluRIB +	chr3L_7_9270001	chr3L_9270001	ZS11_1-HE
1601	chr3L	9443519	9443541	chr3L	9445307	9445329	S-element	6	1788	2.5	6.0	4.2	1.2	1810	chr3L	9443519	intron	CG33926 +	chr3L	9444424	intron	CG33926 +	chr3L	9445329	intron	CG33926 +	chr3L_6_9440001	chr3L_9440001	ZS11_1-HE
1603	chr3L	9501698	9501732	chr3L	9502185	9502219	roo	10	487	2.5	4.5	3.5	2.2	521	chr3L	9501698	intron	path -	chr3L	9501958	intron	path -	chr3L	9502219	intron	path -	chr3L_10_9500001	chr3L_9500001	ZS11_1-HE
1606	chr3L	9533750	9533761	chr3L	9541311	9541322	412	5	7561	7.0	10.0	8.5	0.5	7572	chr3L	9533750	intergenic	not near genes	chr3L	9537536	intergenic	not near genes	chr3L	9541322	intergenic	not near genes	chr3L_5_9535001	chr3L_9535001	ZS11_1-HE
1608	chr3L	9571899	9571937	chr3L	9572248	9572286	jockey	20	349	5.5	6.5	6.0	2.9	387	chr3L	9571899	intron	CG42673 +	chr3L	9572092	intron	CG42673 +	chr3L	9572286	intron	CG42673 +	chr3L_20_9570001	chr3L_9570001	ZS11_1-HE
1609	chr3L	9575904	9575937	chr3L	9580983	9581016	jockey	18	5079	9.0	6.5	7.8	2.0	5112	chr3L	9575904	intron	CG42673 +	chr3L	9578460	intron	CG42673 +	chr3L	9581016	intron	CG42673 +	chr3L_18_9575001	chr3L_9575001	ZS11_1-HE
1618	chr3L	9929669	9929699	chr3L	9938451	9938481	roo	19	8780	6.5	7.5	7.0	2.4	8812	chr3L	9929669	intron	CG34356 +	chr3L	9934075	intron	CG34356 +	chr3L	9938481	intron	CG34356 +	chr3L_19_9930001	chr3L_9930001	ZS11_1-HE
1627	chr3L	10060111	10060115	chr3L	10067691	10067695	17.6	4	7580	12.5	7.0	9.8	0.4	7584	chr3L	10060111	intron	dpr6 +	chr3L	10063903	intron	dpr6 +	chr3L	10067695	intron	dpr6 +	chr3L_4_10060001	chr3L_10060001	ZS11_1-HE
1638	chr3L	10414940	10414942	chr3L	10417313	10417315	Doc	5	2373	1.5	4.0	2.8	1.3	2375	chr3L	10414940	intergenic	CG12362 +	chr3L	10416128	intergenic	not near genes	chr3L	10417315	intergenic	not near genes	chr3L_5_10415001	chr3L_10415001	ZS11_1-HE
1639	chr3L	10414943	10414966	chr3L	10417312	10417339	Doc	13	2373	0.5	4.0	2.2	4.1	2396	chr3L	10414943	intergenic	CG12362 +	chr3L	10416141	intergenic	not near genes	chr3L	10417339	intergenic	not near genes	chr3L_13_10415001	chr3L_10415001	ZS11_1-HE
1667	chr3L	11087058	11087088	chr3L	11088848	11088878	S-element	13	1790	0.0	1.5	0.8	7.2	1820	chr3L	11087058	intron	JIL-1 -	chr3L	11087968	intron	JIL-1 -	chr3L	11088878	intron	JIL-1 -	chr3L_13_11085001	chr3L_11085001	ZS11_1-HE
1669	chr3L	11105296	11105328	chr3L	11107008	11107040	X-element	12	1712	3.5	3.5	3.5	2.7	1744	chr3L	11105296	intergenic	not near genes	chr3L	11106168	intergenic	not near genes	chr3L	11107040	exon	CG32073 -	chr3L_12_11105001	chr3L_11105001	ZS11_1-HE
1675	chr3L	11264471	11264496	chr3L	11271422	11271447	17.6	5	6951	3.0	5.5	4.2	1.0	6976	chr3L	11264471	intergenic	not near genes	chr3L	11267959	intergenic	not near genes	chr3L	11271447	intergenic	not near genes	chr3L_5_11265001	chr3L_11265001	ZS11_1-HE
1677	chr3L	11277458	11277486	chr3L	11278454	11278482	Rt1a	7	996	5.0	5.0	5.0	1.2	1024	chr3L	11277458	intergenic	not near genes	chr3L	11277970	intergenic	not near genes	chr3L	11278482	intergenic	not near genes	chr3L_7_11275001	chr3L_11275001	ZS11_1-HE
1680	chr3L	11329694	11329728	chr3L	11332900	11332931	jockey	11	3206	3.5	8.0	5.8	1.6	3237	chr3L	11329694	intergenic	not near genes	chr3L	11331312	intergenic	not near genes	chr3L	11332931	intergenic	not near genes	chr3L_11_11330001	chr3L_11330001	ZS11_1-HE
1691	chr3L	11723083	11723116	chr3L	11727879	11727912	Doc	17	4796	3.0	7.0	5.0	2.8	4829	chr3L	11723083	3` UTR	Bmcp +	chr3L	11725498	intron	Bmcp +	chr3L	11727912	3` UTR	Bmcp +	chr3L_17_11725001	chr3L_11725001	ZS11_1-HE
1700	chr3L	11864575	11864585	chr3L	11865878	11865888	pogo	8	1303	5.0	9.5	7.2	1.0	1313	chr3L	11864575	intron	CG44837 -	chr3L	11865232	intron	CG44837 -	chr3L	11865888	intron	CG44837 -	chr3L_8_11865001	chr3L_11865001	ZS11_1-HE
1731	chr3L	12874922	12874963	chr3L	12877215	12877256	jockey	19	2293	2.0	3.0	2.5	5.4	2334	chr3L	12874922	intergenic	not near genes	chr3L	12876089	intergenic	not near genes	chr3L	12877256	intergenic	not near genes	chr3L_19_12875001	chr3L_12875001	ZS11_1-HE
1735	chr3L	12919272	12919303	chr3L	12924746	12924777	Rt1c	22	5474	4.5	2.5	3.5	4.9	5505	chr3L	12919272	intergenic	not near genes	chr3L	12922024	intergenic	not near genes	chr3L	12924777	intergenic	not near genes	chr3L_22_12920001	chr3L_12920001	ZS11_1-HE
1736	chr3L	12957783	12957819	chr3L	12962267	12962302	copia	15	4483	4.5	9.5	7.0	1.9	4519	chr3L	12957783	intergenic	not near genes	chr3L	12960042	intergenic	not near genes	chr3L	12962302	intergenic	not near genes	chr3L_15_12960001	chr3L_12960001	ZS11_1-HE
1757	chr3L	13525153	13525188	chr3L	13532950	13532985	roo	19	7797	5.5	6.5	6.0	2.7	7832	chr3L	13525153	intergenic	not near genes	chr3L	13529069	intergenic	not near genes	chr3L	13532985	intergenic	not near genes	chr3L_19_13525001	chr3L_13525001	ZS11_1-HE
1766	chr3L	13804543	13804577	chr3L	13822829	13822864	roo	23	18286	9.0	8.0	8.5	2.4	18321	chr3L	13804543	intergenic	not near genes	chr3L	13813704	intergenic	not near genes	chr3L	13822864	intergenic	not near genes	chr3L_23_13810001	chr3L_13810001	ZS11_1-HE
1779	chr3L	14245571	14245593	chr3L	14245666	14245688	1360	10	95	9.5	4.5	7.0	1.2	117	chr3L	14245571	3` UTR	CR44561 -	chr3L	14245630	3` UTR	CR44561 -	chr3L	14245688	3` UTR	CR44561 -	chr3L_10_14245001	chr3L_14245001	ZS11_1-HE
1780	chr3L	14267370	14267399	chr3L	14271811	14271840	F-element	17	4440	4.0	6.0	5.0	2.8	4470	chr3L	14267370	intergenic	not near genes	chr3L	14269605	intergenic	not near genes	chr3L	14271840	intergenic	not near genes	chr3L_17_14265001	chr3L_14265001	ZS11_1-HE
1783	chr3L	14295979	14296016	chr3L	14296466	14296503	roo	34	486	13.0	12.5	12.8	2.5	524	chr3L	14295979	intron	fz +	chr3L	14296241	intron	fz +	chr3L	14296503	intron	fz +	chr3L_34_14295001	chr3L_14295001	ZS11_1-HE
1784	chr3L	14312018	14312058	chr3L	14316833	14316873	X-element	30	4813	11.0	9.0	10.0	2.7	4855	chr3L	14312018	exon	fz +	chr3L	14314446	intron	fz +	chr3L	14316873	intron	fz +	chr3L_30_14310001	chr3L_14310001	ZS11_1-HE
1791	chr3L	14468445	14468477	chr3L	14473652	14473684	copia	13	5207	8.5	1.5	5.0	2.2	5239	chr3L	14468445	intron	bbg -	chr3L	14471064	intron	bbg -	chr3L	14473684	intron	bbg -	chr3L_13_14470001	chr3L_14470001	ZS11_1-HE
1797	chr3L	14524317	14524349	chr3L	14529080	14529106	F-element	12	4762	4.0	5.0	4.5	2.2	4789	chr3L	14524317	intron	bbg -	chr3L	14526712	intron	bbg -	chr3L	14529106	intron	bbg -	chr3L_12_14525001	chr3L_14525001	ZS11_1-HE
1803	chr3L	14721183	14721210	chr3L	14723027	14723054	Rt1c	16	1844	7.0	6.5	6.8	2.1	1871	chr3L	14721183	intron	ome +	chr3L	14722118	intron	ome +	chr3L	14723054	intron	ome +	chr3L_16_14720001	chr3L_14720001	ZS11_1-HE
1804	chr3L	14725599	14725625	chr3L	14728594	14728620	Doc	8	2994	8.0	11.5	9.8	0.7	3021	chr3L	14725599	intron	ome +	chr3L	14727110	intron	ome +	chr3L	14728620	intron	ome +	chr3L_8_14725001	chr3L_14725001	ZS11_1-HE
1815	chr3L	14954364	14954397	chr3L	14956034	14956067	transib2	20	1669	3.5	7.0	5.2	3.2	1703	chr3L	14954364	intergenic	not near genes	chr3L	14955216	intergenic	not near genes	chr3L	14956067	intergenic	not near genes	chr3L_20_14955001	chr3L_14955001	ZS11_1-HE
1817	chr3L	15085052	15085083	chr3L	15086219	15086250	1360	10	1166	1.0	3.5	2.2	3.1	1198	chr3L	15085052	intron	cp309 -	chr3L	15085651	intron	cp309 -	chr3L	15086250	intron	cp309 -	chr3L_10_15085001	chr3L_15085001	ZS11_1-HE
1825	chr3L	15295765	15295801	chr3L	15298609	15298645	gypsy5	19	2844	6.5	8.5	7.5	2.2	2880	chr3L	15295765	intergenic	not near genes	chr3L	15297205	intergenic	not near genes	chr3L	15298645	intergenic	Best4 +	chr3L_19_15295001	chr3L_15295001	ZS11_1-HE
1830	chr3L	15423765	15423781	chr3L	15426610	15426626	opus	12	2845	5.5	9.0	7.2	1.5	2861	chr3L	15423765	intergenic	not near genes	chr3L	15425196	intergenic	not near genes	chr3L	15426626	intergenic	not near genes	chr3L_12_15425001	chr3L_15425001	ZS11_1-HE
1850	chr3L	15899225	15899259	chr3L	15899793	15899801	jockey	12	564	2.0	7.0	4.5	2.2	576	chr3L	15899225	intergenic	pHCl -	chr3L	15899513	intergenic	pHCl -	chr3L	15899801	intergenic	sff -	chr3L_12_15895001	chr3L_15895001	ZS11_1-HE
1854	chr3L	16184102	16184141	chr3L	16188922	16188958	X-element	23	4819	4.5	8.0	6.2	3.2	4856	chr3L	16184102	intergenic	not near genes	chr3L	16186530	intergenic	not near genes	chr3L	16188958	intergenic	not near genes	chr3L_23_16185001	chr3L_16185001	ZS11_1-HE
1867	chr3L	16443848	16443879	chr3L	16446189	16446220	Doc	23	2341	3.5	11.0	7.2	2.8	2372	chr3L	16443848	intron,intron	CG33158 +,dsx-c73A -	chr3L	16445034	intron,intron	CG33158 +,dsx-c73A -	chr3L	16446220	intron,intron	CG33158 +,dsx-c73A -	chr3L_23_16445001	chr3L_16445001	ZS11_1-HE
1872	chr3L	16493975	16494013	chr3L	16494493	16494531	jockey	31	518	6.0	12.5	9.2	3.0	556	chr3L	16493975	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L	16494253	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L	16494531	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L_31_16490001	chr3L_16490001	ZS11_1-HE
1875	chr3L	16684016	16684052	chr3L	16689238	16689274	copia	24	5222	4.5	9.0	6.8	3.1	5258	chr3L	16684016	intron,intron	Lasp -,CG43954 -	chr3L	16686645	intron,intron	Lasp -,CG43954 -	chr3L	16689274	intron,intron,5` UTR	Lasp -,CG43954 -,CR45179 +	chr3L_24_16685001	chr3L_16685001	ZS11_1-HE
1888	chr3L	16945725	16945761	chr3L	16954879	16954915	roo	39	9152	7.0	1.0	4.0	7.8	9190	chr3L	16945725	exon	Obp73a +	chr3L	16950320	intergenic	not near genes	chr3L	16954915	5` UTR	Nc73EF +	chr3L_39_16950001	chr3L_16950001	ZS11_1-HE
1891	chr3L	17034931	17034961	chr3L	17035120	17035150	G2	6	189	2.5	3.0	2.8	1.6	219	chr3L	17034931	intergenic	not near genes	chr3L	17035040	intergenic	not near genes	chr3L	17035150	intergenic	not near genes	chr3L_6_17035001	chr3L_17035001	ZS11_1-HE
1892	chr3L	17085002	17085036	chr3L	17094152	17094186	roo	28	9150	11.5	10.0	10.8	2.4	9184	chr3L	17085002	intron	Rbp6 -	chr3L	17089594	intron	Rbp6 -	chr3L	17094186	intron	Rbp6 -	chr3L_28_17085001	chr3L_17085001	ZS11_1-HE
1899	chr3L	17516980	17517011	chr3L	17524539	17524570	412	10	7557	4.5	6.0	5.2	1.6	7590	chr3L	17516980	intron	CG7564 +	chr3L	17520775	intron	CG7564 +	chr3L	17524570	3` UTR	CG7564 +	chr3L_10_17520001	chr3L_17520001	ZS11_1-HE
1910	chr3L	17730745	17730778	chr3L	17738234	17738267	mdg1	17	7489	5.0	2.5	3.8	3.5	7522	chr3L	17730745	intron	Ccn +	chr3L	17734506	intron	Ccn +	chr3L	17738267	intron	Ccn +	chr3L_17_17730001	chr3L_17730001	ZS11_1-HE
1915	chr3L	17799815	17799839	chr3L	17801603	17801627	S-element	12	1788	2.5	4.0	3.2	2.9	1812	chr3L	17799815	intron	NUCB1 -	chr3L	17800721	intron	NUCB1 -	chr3L	17801627	intron	NUCB1 -	chr3L_12_17800001	chr3L_17800001	ZS11_1-HE
1923	chr3L	18047704	18047739	chr3L	18056762	18056797	roo	14	9058	5.5	3.0	4.2	2.7	9093	chr3L	18047704	intron	Eip75B -	chr3L	18052250	intron	Eip75B -	chr3L	18056797	intron	Eip75B -	chr3L_14_18050001	chr3L_18050001	ZS11_1-HE
1948	chr3L	18506131	18506164	chr3L	18509594	18509625	F-element	17	3463	5.5	3.0	4.2	3.3	3494	chr3L	18506131	intergenic	not near genes	chr3L	18507878	intergenic	not near genes	chr3L	18509625	intergenic	not near genes	chr3L_17_18505001	chr3L_18505001	ZS11_1-HE
1949	chr3L	18514902	18514941	chr3L	18520094	18520106	BS	21	5191	5.5	7.5	6.5	2.8	5204	chr3L	18514902	intergenic	not near genes	chr3L	18517504	intergenic	not near genes	chr3L	18520106	intergenic	not near genes	chr3L_21_18515001	chr3L_18515001	ZS11_1-HE
1950	chr3L	18528624	18528661	chr3L	18537786	18537823	roo	26	9161	4.0	6.5	5.2	4.2	9199	chr3L	18528624	intergenic	not near genes	chr3L	18533224	intergenic	not near genes	chr3L	18537823	intergenic	not near genes	chr3L_26_18530001	chr3L_18530001	ZS11_1-HE
1954	chr3L	18593945	18593975	chr3L	18595926	18595956	Doc	6	1981	1.0	0.0	0.5	4.0	2011	chr3L	18593945	intergenic	term -	chr3L	18594950	intergenic	not near genes	chr3L	18595956	intergenic	CR45389 +	chr3L_6_18590001	chr3L_18590001	ZS11_1-HE
1960	chr3L	18772254	18772277	chr3L	18781095	18781118	roo	14	8841	3.0	6.5	4.8	2.4	8864	chr3L	18772254	intron	ftz-f1 -	chr3L	18776686	intron	ftz-f1 -	chr3L	18781118	intron	ftz-f1 -	chr3L_14_18775001	chr3L_18775001	ZS11_1-HE
1962	chr3L	18833776	18833812	chr3L	18834941	18834977	1360	7	1165	3.0	6.0	4.5	1.3	1201	chr3L	18833776	intron	Indy -	chr3L	18834376	intron	Indy -	chr3L	18834977	intron	Indy -	chr3L_7_18830001	chr3L_18830001	ZS11_1-HE
1970	chr3L	19008833	19008873	chr3L	19009175	19009212	jockey	18	337	0.5	6.0	3.2	4.3	379	chr3L	19008833	intron	nkd -	chr3L	19009022	intron	nkd -	chr3L	19009212	intron	nkd -	chr3L_18_19005001	chr3L_19005001	ZS11_1-HE
1977	chr3L	19115635	19115669	chr3L	19115813	19115850	BS	12	180	5.0	3.0	4.0	2.4	215	chr3L	19115635	intron	CG14082 -	chr3L	19115742	intron	CG14082 -	chr3L	19115850	intron	CG14082 -	chr3L_12_19115001	chr3L_19115001	ZS11_1-HE
1978	chr3L	19117041	19117076	chr3L	19124489	19124524	mdg1	11	7447	5.0	5.0	5.0	1.8	7483	chr3L	19117041	intron	CG14082 -	chr3L	19120782	intron	CG14082 -	chr3L	19124524	intron	CG14082 -	chr3L_11_19120001	chr3L_19120001	ZS11_1-HE
1983	chr3L	19208055	19208092	chr3L	19209430	19209467	Doc	22	1375	7.0	4.0	5.5	3.4	1412	chr3L	19208055	intron	fz2 -	chr3L	19208761	intron	fz2 -	chr3L	19209467	intron	fz2 -	chr3L_22_19205001	chr3L_19205001	ZS11_1-HE
1999	chr3L	19820301	19820318	chr3L	19827851	19827868	412	11	7550	2.5	5.5	4.0	2.2	7567	chr3L	19820301	intron	Deaf1 +	chr3L	19824084	intron	Deaf1 +	chr3L	19827868	intron	Deaf1 +	chr3L_11_19820001	chr3L_19820001	ZS11_1-HE
2000	chr3L	19848505	19848533	chr3L	19857696	19857724	roo	7	9191	3.5	3.5	3.5	1.6	9219	chr3L	19848505	intron	Papss +	chr3L	19853114	intron	Papss +	chr3L	19857724	intron	Papss +	chr3L_7_19850001	chr3L_19850001	ZS11_1-HE
2001	chr3L	19861819	19861845	chr3L	19863608	19863633	S-element	5	1789	3.5	2.0	2.8	1.3	1814	chr3L	19861819	5` UTR	CR45433 +	chr3L	19862726	intergenic	not near genes	chr3L	19863633	intergenic	not near genes	chr3L_5_19860001	chr3L_19860001	ZS11_1-HE
2008	chr3L	20113673	20113688	chr3L	20122931	20122945	roo	5	9258	3.5	4.0	3.8	1.0	9272	chr3L	20113673	intergenic	not near genes	chr3L	20118309	intergenic	not near genes	chr3L	20122945	intergenic	not near genes	chr3L_5_20115001	chr3L_20115001	ZS11_1-HE
2014	chr3L	20257333	20257360	chr3L	20258454	20258474	pogo	20	1120	2.0	0.0	1.0	10.0	1141	chr3L	20257333	intron	rdgC +	chr3L	20257904	intron	rdgC +	chr3L	20258474	intron	rdgC +	chr3L_20_20255001	chr3L_20255001	ZS11_1-HE
2017	chr3L	20321100	20321104	chr3L	20342905	20342909	17.6	5	21805	16.0	36.5	26.2	0.2	21809	chr3L	20321100	exon	Spn77Bb +	chr3L	20332004	intergenic	not near genes	chr3L	20342909	exon	Spn77Bc +	chr3L_5_20330001	chr3L_20330001	ZS11_1-HE
2018	chr3L	20476751	20476778	chr3L	20484351	20484378	springer	5	7600	3.0	0.0	1.5	2.0	7627	chr3L	20476751	3` UTR	isoQC +	chr3L	20480564	intergenic	not near genes	chr3L	20484378	3` UTR	ZnT77C -	chr3L_5_20480001	chr3L_20480001	ZS11_1-HE
2019	chr3L	20590062	20590096	chr3L	20590602	20590635	412	30	537	5.0	6.5	5.8	4.4	573	chr3L	20590062	intergenic	not near genes	chr3L	20590348	intergenic	not near genes	chr3L	20590635	intergenic	not near genes	chr3L_30_20590001	chr3L_20590001	ZS11_1-HE
2026	chr3L	20821271	20821310	chr3L	20824741	20824780	NOF	5	3470	4.0	1.0	2.5	1.4	3509	chr3L	20821271	intron	Pka-R1 +	chr3L	20823026	intron	Pka-R1 +	chr3L	20824780	intron	Pka-R1 +	chr3L_5_20820001	chr3L_20820001	ZS11_1-HE
2033	chr3L	21014912	21014947	chr3L	21023394	21023423	Tirant	26	8481	10.0	13.0	11.5	2.1	8511	chr3L	21014912	intron	skd -	chr3L	21019168	intron	skd -	chr3L	21023423	intron	skd -	chr3L_26_21015001	chr3L_21015001	ZS11_1-HE
2035	chr3L	21151862	21151897	chr3L	21156947	21156982	flea	15	5085	4.5	5.5	5.0	2.5	5120	chr3L	21151862	intron	Ac78C -	chr3L	21154422	intron	Ac78C -	chr3L	21156982	intron	Ac78C -	chr3L_15_21150001	chr3L_21150001	ZS11_1-HE
2037	chr3L	21243756	21243767	chr3L	21251312	21251331	412	5	7562	4.0	3.5	3.8	1.0	7575	chr3L	21243756	intron	Eip78C +	chr3L	21247544	intron	Eip78C +	chr3L	21251331	intron	Eip78C +	chr3L_5_21245001	chr3L_21245001	ZS11_1-HE
2041	chr3L	21306144	21306181	chr3L	21315304	21315341	roo	9	9160	3.0	5.5	4.2	1.7	9197	chr3L	21306144	3` UTR,3` UTR	CG7632 +,Pc -	chr3L	21310742	intron	Pc -	chr3L	21315341	3` UTR	Pc -	chr3L_9_21310001	chr3L_21310001	ZS11_1-HE
2042	chr3L	21361729	21361753	chr3L	21362684	21362708	G2	8	955	4.5	3.0	3.8	1.7	979	chr3L	21361729	intergenic	CG32440 +	chr3L	21362218	intergenic	not near genes	chr3L	21362708	intergenic	not near genes	chr3L_8_21360001	chr3L_21360001	ZS11_1-HE
2043	chr3L	21372718	21372751	chr3L	21379227	21379259	McClintock	18	6509	5.5	7.0	6.2	2.5	6541	chr3L	21372718	intergenic	not near genes	chr3L	21375988	intergenic	not near genes	chr3L	21379259	intergenic	not near genes	chr3L_18_21375001	chr3L_21375001	ZS11_1-HE
2049	chr3L	21498837	21498866	chr3L	21500474	21500503	1360	11	1637	3.5	11.0	7.2	1.3	1666	chr3L	21498837	intron	Glg1 -	chr3L	21499670	intron	Glg1 -	chr3L	21500503	intron	Glg1 -	chr3L_11_21495001	chr3L_21495001	ZS11_1-HE
2054	chr3L	21749314	21749349	chr3L	21754475	21754508	Doc	15	5161	4.0	3.0	3.5	3.3	5194	chr3L	21749314	intron	Syn1 -	chr3L	21751911	intron	Syn1 -	chr3L	21754508	intron	Syn1 -	chr3L_15_21750001	chr3L_21750001	ZS11_1-HE
2062	chr3L	22099673	22099705	chr3L	22105860	22105892	3S18	15	6187	7.0	5.0	6.0	2.1	6219	chr3L	22099673	intergenic	not near genes	chr3L	22102782	intergenic	not near genes	chr3L	22105892	intergenic	not near genes	chr3L_15_22100001	chr3L_22100001	ZS11_1-HE
2078	chr3L	22555768	22555803	chr3L	22563239	22563274	blood	30	7470	3.5	2.5	3.0	7.5	7506	chr3L	22555768	intergenic	not near genes	chr3L	22559521	intergenic	not near genes	chr3L	22563274	intergenic	not near genes	chr3L_30_22555001	chr3L_22555001	ZS11_1-HE
2079	chr3L	22577622	22577646	chr3L	22582411	22582435	Doc	11	4789	5.0	11.0	8.0	1.2	4813	chr3L	22577622	intergenic	not near genes	chr3L	22580028	intergenic	not near genes	chr3L	22582435	3` UTR	CG14459 -	chr3L_11_22580001	chr3L_22580001	ZS11_1-HE
2080	chr3L	22617210	22617222	chr3L	22624663	22624675	blood	4	7453	0.0	10.5	5.2	0.6	7465	chr3L	22617210	intron	CG14459 -	chr3L	22620942	intron	CG14459 -	chr3L	22624675	intron	CG14459 -	chr3L_4_22620001	chr3L_22620001	ZS11_1-HE
2081	chr3L	22761386	22761423	chr3L	22766821	22766858	Ivk	14	5435	3.5	6.5	5.0	2.3	5472	chr3L	22761386	intron	SPoCk +	chr3L	22764122	intron	SPoCk +	chr3L	22766858	intron	SPoCk +	chr3L_14_22760001	chr3L_22760001	ZS11_1-HE
2084	chr3L	22865981	22866012	chr3L	22867115	22867146	Doc	5	1134	5.5	5.0	5.2	0.8	1165	chr3L	22865981	intron	CG33170 +	chr3L	22866564	intron	CG33170 +	chr3L	22867146	intron	CG33170 +	chr3L_5_22865001	chr3L_22865001	ZS11_1-HE
2087	chr3L	22989868	22989892	chr3L	22996839	22996867	297	6	6974	5.0	4.0	4.5	1.1	6999	chr3L	22989868	intergenic	not near genes	chr3L	22993368	intergenic	not near genes	chr3L	22996867	intergenic	not near genes	chr3L_6_22990001	chr3L_22990001	ZS11_1-HE
2088	chr3L	23042242	23042259	chr3L	23048984	23049013	gypsy6	7	6752	2.5	2.5	2.5	2.0	6771	chr3L	23042242	intergenic	not near genes	chr3L	23045628	intergenic	not near genes	chr3L	23049013	intergenic	not near genes	chr3L_7_23045001	chr3L_23045001	ZS11_1-HE
2100	chr3L	24012411	24012438	chr3L	24020753	24020780	roo	7	8342	2.0	3.5	2.8	1.8	8369	chr3L	24012411	intergenic	not near genes	chr3L	24016596	intergenic	not near genes	chr3L	24020780	intergenic	not near genes	chr3L_7_24015001	chr3L_24015001	ZS11_1-HE
2101	chr3L	24021279	24021307	chr3L	24022437	24022465	1360	4	1158	2.5	1.5	2.0	1.3	1186	chr3L	24021279	intergenic	not near genes	chr3L	24021872	intergenic	not near genes	chr3L	24022465	intergenic	not near genes	chr3L_4_24020001	chr3L_24020001	ZS11_1-HE
2102	chr3L	24168800	24168822	chr3L	24176129	24176151	ZAM	4	7329	1.5	7.0	4.2	0.8	7351	chr3L	24168800	intron	Snap25 +	chr3L	24172476	intron	Snap25 +	chr3L	24176151	intron	Snap25 +	chr3L_4_24170001	chr3L_24170001	ZS11_1-HE
2108	chr3L	25406604	25406614	chr3L	25411027	25411037	Doc	6	4423	10.0	3.5	6.8	0.8	4433	chr3L	25406604	intergenic	not near genes	chr3L	25408820	intergenic	not near genes	chr3L	25411037	intergenic	not near genes	chr3L_6_25405001	chr3L_25405001	ZS11_1-HE
2109	chr3L	25455326	25455344	chr3L	25455925	25455943	INE-1	5	599	0.0	2.5	1.2	2.3	617	chr3L	25455326	intergenic	not near genes	chr3L	25455634	intergenic	not near genes	chr3L	25455943	intergenic	not near genes	chr3L_5_25455001	chr3L_25455001	ZS11_1-HE
2110	chr3L	25628500	25628529	chr3L	25633272	25633301	F-element	10	4772	1.5	3.5	2.5	2.9	4801	chr3L	25628500	intron	CG41343 -	chr3L	25630900	intron	CG41343 -	chr3L	25633301	intron	CG41343 -	chr3L_10_25630001	chr3L_25630001	ZS11_1-HE
2112	chr3L	25824677	25824680	chr3L	27273495	27273498	F-element	4	1448818	64.5	12.0	38.2	0.1	1448821	chr3L	25824677	intron	CG40178 -	chr3L	26549088	intergenic	not near genes	chr3L	27273498	intergenic	not near genes	chr3L_4_26545001	chr3L_26545001	ZS11_1-HE
2130	chr3R	4105037	4105069	chr3R	4110242	4110274	copia	6	5205	3.0	1.5	2.2	1.9	5237	chr3R	4105037	intergenic	not near genes	chr3R	4107656	intergenic	not near genes	chr3R	4110274	intergenic	not near genes	chr3R_6_4105001	chr3R_4105001	ZS11_1-HE
2131	chr3R	4114232	4114235	chr3R	4126699	4126702	McClintock	4	12467	1.5	5.0	3.2	1.0	12470	chr3R	4114232	intergenic	not near genes	chr3R	4120467	intergenic	not near genes	chr3R	4126702	5` UTR	Gfat1 +	chr3R_4_4120001	chr3R_4120001	ZS11_1-HE
2134	chr3R	4206073	4206097	chr3R	4211649	4211673	mdg3	4	5576	4.0	2.5	3.2	1.0	5600	chr3R	4206073	intron	CG14636 -	chr3R	4208873	intron	CG14636 -	chr3R	4211673	intron	CG14636 -	chr3R_4_4205001	chr3R_4205001	ZS11_1-HE
2137	chr3R	4366755	4366787	chr3R	4375139	4375171	roo	25	8384	7.0	3.5	5.2	4.0	8416	chr3R	4366755	3` UTR	CG1090 +	chr3R	4370963	intergenic	not near genes	chr3R	4375171	5` UTR	CR44922 +	chr3R_25_4370001	chr3R_4370001	ZS11_1-HE
2138	chr3R	4408412	4408442	chr3R	4412716	4412747	Juan	7	4305	4.5	5.0	4.8	1.2	4335	chr3R	4408412	intron	CG32944 -	chr3R	4410580	intron	CG32944 -	chr3R	4412747	intron	CG32944 -	chr3R_7_4410001	chr3R_4410001	ZS11_1-HE
2140	chr3R	4538900	4538912	chr3R	4540145	4540173	1360	12	1256	2.0	7.0	4.5	2.2	1273	chr3R	4538900	intron	CG34357 -	chr3R	4539536	intron	CG34357 -	chr3R	4540173	intron	CG34357 -	chr3R_12_4535001	chr3R_4535001	ZS11_1-HE
2141	chr3R	4609544	4609578	chr3R	4610709	4610743	1360	16	1165	2.5	3.0	2.8	4.2	1199	chr3R	4609544	intergenic	not near genes	chr3R	4610144	intergenic	not near genes	chr3R	4610743	intergenic	not near genes	chr3R_16_4610001	chr3R_4610001	ZS11_1-HE
2144	chr3R	4683176	4683210	chr3R	4684936	4684970	S-element	22	1759	3.5	8.5	6.0	3.1	1794	chr3R	4683176	intron	CG43427 +	chr3R	4684073	intron	CG43427 +	chr3R	4684970	intron	CG43427 +	chr3R_22_4680001	chr3R_4680001	ZS11_1-HE
2146	chr3R	4753239	4753265	chr3R	4757543	4757569	F-element	9	4303	9.0	5.5	7.2	1.1	4330	chr3R	4753239	intron,intron	atms +,CG44098 -	chr3R	4755404	intron,intron	atms +,CG44098 -	chr3R	4757569	intron,exon	atms +,CG44098 -	chr3R_9_4755001	chr3R_4755001	ZS11_1-HE
2147	chr3R	4759722	4759747	chr3R	4761220	4761244	hopper2	12	1498	8.0	5.5	6.8	1.5	1522	chr3R	4759722	intron,intron	atms +,CG44098 -	chr3R	4760483	intron,intron	atms +,CG44098 -	chr3R	4761244	intron,intron	atms +,CG44098 -	chr3R_12_4760001	chr3R_4760001	ZS11_1-HE
2156	chr3R	5045842	5045878	chr3R	5052945	5052981	HMS-Beagle	14	7103	4.5	4.5	4.5	2.5	7139	chr3R	5045842	intron	CR43635 -	chr3R	5049412	intergenic	not near genes	chr3R	5052981	intergenic	CR45588 -	chr3R_14_5045001	chr3R_5045001	ZS11_1-HE
2157	chr3R	5067978	5068014	chr3R	5073496	5073532	mdg3	32	5518	2.5	3.5	3.0	8.0	5554	chr3R	5067978	intergenic	not near genes	chr3R	5070755	intergenic	not near genes	chr3R	5073532	intergenic	not near genes	chr3R_32_5070001	chr3R_5070001	ZS11_1-HE
2165	chr3R	5338395	5338427	chr3R	5343573	5343605	Rt1c	19	5178	10.0	12.5	11.2	1.6	5210	chr3R	5338395	intron	mtd -	chr3R	5341000	intron	mtd -	chr3R	5343605	intron	mtd -	chr3R_19_5340001	chr3R_5340001	ZS11_1-HE
2166	chr3R	5445959	5445994	chr3R	5452420	5452455	Burdock	13	6461	1.0	3.0	2.0	4.3	6496	chr3R	5445959	intron	CG14669 +	chr3R	5449207	intron	CG14669 +	chr3R	5452455	intron	CG14669 +	chr3R_13_5445001	chr3R_5445001	ZS11_1-HE
2168	chr3R	5746015	5746046	chr3R	5746257	5746288	pogo	8	242	1.0	2.5	1.8	2.9	273	chr3R	5746015	3` UTR	Madm +	chr3R	5746152	3` UTR	Madm +	chr3R	5746288	3` UTR	Madm +	chr3R_8_5745001	chr3R_5745001	ZS11_1-HE
2169	chr3R	5747011	5747040	chr3R	5753203	5753232	diver	5	6192	2.0	1.5	1.8	1.8	6221	chr3R	5747011	intergenic	Madm +	chr3R	5750122	intergenic	not near genes	chr3R	5753232	intergenic	CG2091 -	chr3R_5_5750001	chr3R_5750001	ZS11_1-HE
2170	chr3R	5809115	5809143	chr3R	5809357	5809385	pogo	19	242	3.0	2.5	2.8	5.0	270	chr3R	5809115	3` UTR	CG11000 +	chr3R	5809250	3` UTR	CG11000 +	chr3R	5809385	3` UTR	CG11000 +	chr3R_19_5805001	chr3R_5805001	ZS11_1-HE
2171	chr3R	5822376	5822413	chr3R	5823544	5823581	1360	14	1168	1.5	3.5	2.5	4.0	1205	chr3R	5822376	3` UTR	CG2023 -	chr3R	5822978	3` UTR	CG2023 -	chr3R	5823581	3` UTR	CG2023 -	chr3R_14_5820001	chr3R_5820001	ZS11_1-HE
2180	chr3R	6015962	6015989	chr3R	6024444	6024471	Tirant	9	8482	5.0	2.0	3.5	2.0	8509	chr3R	6015962	intergenic	not near genes	chr3R	6020216	intergenic	not near genes	chr3R	6024471	intergenic	not near genes	chr3R_9_6020001	chr3R_6020001	ZS11_1-HE
2185	chr3R	6158506	6158542	chr3R	6167090	6167126	Tirant	10	8580	7.5	1.5	4.5	1.8	8620	chr3R	6158506	intergenic	not near genes	chr3R	6162816	intergenic	not near genes	chr3R	6167126	intergenic	CG1077 +	chr3R_10_6160001	chr3R_6160001	ZS11_1-HE
2186	chr3R	6175173	6175201	chr3R	6182446	6182474	HMS-Beagle2	6	7273	5.0	4.5	4.8	1.0	7301	chr3R	6175173	intergenic	Osi1 +	chr3R	6178824	intron	CR45194 +	chr3R	6182474	intergenic	CR45194 +	chr3R_6_6175001	chr3R_6175001	ZS11_1-HE
2187	chr3R	6206282	6206319	chr3R	6206498	6206518	BS	16	217	2.5	6.0	4.2	3.1	236	chr3R	6206282	exon	Osi24 +	chr3R	6206400	intron	Osi24 +	chr3R	6206518	intron	Osi24 +	chr3R_16_6205001	chr3R_6205001	ZS11_1-HE
2192	chr3R	6510021	6510051	chr3R	6515103	6515133	jockey	22	5082	5.5	3.5	4.5	4.0	5112	chr3R	6510021	intergenic	not near genes	chr3R	6512577	intergenic	not near genes	chr3R	6515133	intergenic	not near genes	chr3R_22_6510001	chr3R_6510001	ZS11_1-HE
2200	chr3R	6737496	6737529	chr3R	6739284	6739317	Doc	6	1788	2.0	4.5	3.2	1.4	1821	chr3R	6737496	intron	pb -	chr3R	6738406	intron	pb -	chr3R	6739317	intron	pb -	chr3R_6_6735001	chr3R_6735001	ZS11_1-HE
2232	chr3R	7694574	7694610	chr3R	7713636	7713672	invader3	11	19062	6.0	5.5	5.8	1.6	19098	chr3R	7694574	3` UTR	Nlg1 +	chr3R	7704123	intergenic	not near genes	chr3R	7713672	intergenic	not near genes	chr3R_11_7700001	chr3R_7700001	ZS11_1-HE
2233	chr3R	7729468	7729499	chr3R	7737407	7737438	Stalker2	14	7939	5.5	8.5	7.0	1.8	7970	chr3R	7729468	intergenic	not near genes	chr3R	7733453	intergenic	not near genes	chr3R	7737438	intergenic	not near genes	chr3R_14_7730001	chr3R_7730001	ZS11_1-HE
2235	chr3R	7849643	7849675	chr3R	7850811	7850843	1360	11	1168	1.5	4.0	2.8	2.9	1200	chr3R	7849643	intron	CG34384 +	chr3R	7850243	intron	CG34384 +	chr3R	7850843	intron	CG34384 +	chr3R_11_7850001	chr3R_7850001	ZS11_1-HE
2237	chr3R	7973327	7973347	chr3R	7974392	7974412	1360	15	1064	5.0	4.0	4.5	2.7	1085	chr3R	7973327	intergenic	not near genes	chr3R	7973870	intergenic	not near genes	chr3R	7974412	3` UTR	CD98hc -	chr3R_15_7970001	chr3R_7970001	ZS11_1-HE
2241	chr3R	8090564	8090571	chr3R	8094042	8094049	297	7	3478	9.5	16.0	12.8	0.5	3485	chr3R	8090564	intergenic	CR44330 +	chr3R	8092306	intergenic	not near genes	chr3R	8094049	intergenic	CG7900 +	chr3R_7_8090001	chr3R_8090001	ZS11_1-HE
2242	chr3R	8094405	8094441	chr3R	8099711	8099747	Transpac	22	5306	6.5	5.5	6.0	3.1	5342	chr3R	8094405	intron	CG7900 +	chr3R	8097076	intron	CG7900 +	chr3R	8099747	intron	CG7900 +	chr3R_22_8095001	chr3R_8095001	ZS11_1-HE
2243	chr3R	8101761	8101791	chr3R	8104846	8104876	G2	21	3085	3.5	5.5	4.5	3.8	3115	chr3R	8101761	exon	CG7900 +	chr3R	8103318	intron	CG7900 +	chr3R	8104876	3` UTR	CG7900 +	chr3R_21_8100001	chr3R_8100001	ZS11_1-HE
2244	chr3R	8207562	8207588	chr3R	8208398	8208434	F-element	12	845	2.5	3.5	3.0	3.0	872	chr3R	8207562	intergenic	not near genes	chr3R	8207998	intergenic	not near genes	chr3R	8208434	intergenic	not near genes	chr3R_12_8205001	chr3R_8205001	ZS11_1-HE
2246	chr3R	8403004	8403041	chr3R	8412171	8412208	roo	41	9166	13.5	19.5	16.5	2.3	9204	chr3R	8403004	intron	CG45263 -	chr3R	8407606	intron	CG45263 -	chr3R	8412208	intron	CG45263 -	chr3R_41_8405001	chr3R_8405001	ZS11_1-HE
2250	chr3R	8570476	8570499	chr3R	8575113	8575131	HMS-Beagle	8	4636	6.5	3.5	5.0	1.3	4655	chr3R	8570476	intergenic	not near genes	chr3R	8572804	intergenic	not near genes	chr3R	8575131	intergenic	not near genes	chr3R_8_8570001	chr3R_8570001	ZS11_1-HE
2251	chr3R	8601770	8601800	chr3R	8610924	8610954	roo	18	9154	8.5	7.0	7.8	2.0	9184	chr3R	8601770	intron	5-HT2B +	chr3R	8606362	intron	5-HT2B +	chr3R	8610954	intron	5-HT2B +	chr3R_18_8605001	chr3R_8605001	ZS11_1-HE
2253	chr3R	8707355	8707385	chr3R	8709797	8709827	jockey	18	2442	7.5	10.5	9.0	1.8	2472	chr3R	8707355	intergenic	not near genes	chr3R	8708591	intergenic	not near genes	chr3R	8709827	intergenic	not near genes	chr3R_18_8705001	chr3R_8705001	ZS11_1-HE
2256	chr3R	8894870	8894906	chr3R	8896027	8896063	1360	24	1157	7.5	10.5	9.0	2.4	1193	chr3R	8894870	intron	pyd -	chr3R	8895466	intron	pyd -	chr3R	8896063	intron	pyd -	chr3R_24_8895001	chr3R_8895001	ZS11_1-HE
2257	chr3R	8898207	8898211	chr3R	8913802	8913806	297	4	15595	8.5	6.5	7.5	0.5	15599	chr3R	8898207	intron	pyd -	chr3R	8906006	intron	pyd -	chr3R	8913806	intron	pyd -	chr3R_4_8905001	chr3R_8905001	ZS11_1-HE
2265	chr3R	9278781	9278810	chr3R	9284042	9284071	Rt1a	12	5261	5.0	7.0	6.0	1.7	5290	chr3R	9278781	intergenic	not near genes	chr3R	9281426	intergenic	not near genes	chr3R	9284071	intergenic	not near genes	chr3R_12_9280001	chr3R_9280001	ZS11_1-HE
2266	chr3R	9319578	9319604	chr3R	9320014	9320040	jockey	17	436	7.0	9.0	8.0	1.9	462	chr3R	9319578	intron	CG8861 -	chr3R	9319809	intron	CG8861 -	chr3R	9320040	intron	CG8861 -	chr3R_17_9315001	chr3R_9315001	ZS11_1-HE
2268	chr3R	9361814	9361843	chr3R	9362056	9362085	pogo	17	242	10.5	2.0	6.2	2.4	271	chr3R	9361814	3` UTR	CG45050 +	chr3R	9361950	3` UTR	CG45050 +	chr3R	9362085	3` UTR	CG45050 +	chr3R_17_9360001	chr3R_9360001	ZS11_1-HE
2272	chr3R	9699972	9700001	chr3R	9700062	9700091	1360	18	90	5.5	3.5	4.5	3.3	119	chr3R	9699972	intron	Unc-115a -	chr3R	9700032	intron	Unc-115a -	chr3R	9700091	intron	Unc-115a -	chr3R_18_9700001	chr3R_9700001	ZS11_1-HE
2279	chr3R	10231780	10231814	chr3R	10237358	10237392	mdg3	13	5576	2.5	4.5	3.5	2.9	5612	chr3R	10231780	intron	CG42795 +	chr3R	10234586	intron	CG42795 +	chr3R	10237392	intron	CG42795 +	chr3R_13_10230001	chr3R_10230001	ZS11_1-HE
2280	chr3R	10255380	10255387	chr3R	10260821	10260828	I-element	5	5441	10.5	9.0	9.8	0.5	5448	chr3R	10255380	exon	Sirt6 -	chr3R	10258104	intron	Sirt6 -	chr3R	10260828	exon	Sirt6 -	chr3R_5_10255001	chr3R_10255001	ZS11_1-HE
2291	chr3R	10804173	10804206	chr3R	10811706	10811739	17.6	5	7533	1.5	2.0	1.8	1.8	7566	chr3R	10804173	intergenic	CG14692 -	chr3R	10807956	intergenic	not near genes	chr3R	10811739	3` UTR	CG14693 -	chr3R_5_10805001	chr3R_10805001	ZS11_1-HE
2297	chr3R	10957881	10957885	chr3R	10963252	10963267	Rt1c	5	5378	9.0	4.5	6.8	0.6	5386	chr3R	10957881	intergenic	not near genes	chr3R	10960574	intergenic	not near genes	chr3R	10963267	intergenic	not near genes	chr3R_5_10960001	chr3R_10960001	ZS11_1-HE
2299	chr3R	11065587	11065607	chr3R	11071244	11071264	297	4	5657	5.5	8.5	7.0	0.5	5677	chr3R	11065587	intergenic	not near genes	chr3R	11068426	intergenic	not near genes	chr3R	11071264	intergenic	not near genes	chr3R_4_11065001	chr3R_11065001	ZS11_1-HE
2305	chr3R	11379234	11379269	chr3R	11388390	11388425	roo	31	9156	6.0	8.5	7.2	3.8	9191	chr3R	11379234	intron	pros +	chr3R	11383830	intron	pros +	chr3R	11388425	intron	pros +	chr3R_31_11380001	chr3R_11380001	ZS11_1-HE
2315	chr3R	11841059	11841096	chr3R	11846251	11846288	BS	22	5191	12.5	8.5	10.5	1.9	5229	chr3R	11841059	intron	CG6959 -	chr3R	11843674	intron	CG6959 -	chr3R	11846288	intron	CG6959 -	chr3R_22_11840001	chr3R_11840001	ZS11_1-HE
2317	chr3R	12022882	12022913	chr3R	12025060	12025091	pogo	10	2178	5.0	3.5	4.2	1.9	2209	chr3R	12022882	intergenic	not near genes	chr3R	12023986	intergenic	not near genes	chr3R	12025091	intergenic	not near genes	chr3R_10_12020001	chr3R_12020001	ZS11_1-HE
2335	chr3R	12780275	12780299	chr3R	12780389	12780413	BS	16	114	7.0	5.0	6.0	2.3	138	chr3R	12780275	intron	beat-Vc -	chr3R	12780344	intron	beat-Vc -	chr3R	12780413	intron	beat-Vc -	chr3R_16_12780001	chr3R_12780001	ZS11_1-HE
2342	chr3R	12864565	12864593	chr3R	12865051	12865079	roo	7	486	1.0	3.0	2.0	2.3	514	chr3R	12864565	intergenic	not near genes	chr3R	12864822	intergenic	not near genes	chr3R	12865079	intergenic	not near genes	chr3R_7_12860001	chr3R_12860001	ZS11_1-HE
2345	chr3R	12920150	12920186	chr3R	12925354	12925390	copia	22	5200	4.5	9.5	7.0	2.8	5240	chr3R	12920150	intron	beat-Vb +	chr3R	12922770	intron	beat-Vb +	chr3R	12925390	intron	beat-Vb +	chr3R_22_12920001	chr3R_12920001	ZS11_1-HE
2353	chr3R	13143039	13143065	chr3R	13148616	13148642	mdg3	14	5576	4.0	5.5	4.8	2.4	5603	chr3R	13143039	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13145840	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13148642	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R_14_13145001	chr3R_13145001	ZS11_1-HE
2365	chr3R	13517221	13517258	chr3R	13520039	13520076	jockey	25	2818	3.5	5.5	4.5	4.5	2855	chr3R	13517221	intergenic	not near genes	chr3R	13518648	intergenic	not near genes	chr3R	13520076	intergenic	not near genes	chr3R_25_13515001	chr3R_13515001	ZS11_1-HE
2376	chr3R	14021649	14021680	chr3R	14023467	14023498	S-element	17	1818	6.0	5.5	5.8	2.5	1849	chr3R	14021649	intron	rdx -	chr3R	14022574	intron	rdx -	chr3R	14023498	intron	rdx -	chr3R_17_14020001	chr3R_14020001	ZS11_1-HE
2380	chr3R	14180809	14180842	chr3R	14185575	14185608	F-element	25	4766	9.0	9.0	9.0	2.5	4799	chr3R	14180809	intron	Dop1R1 -	chr3R	14183208	intron	Dop1R1 -	chr3R	14185608	intron	Dop1R1 -	chr3R_25_14180001	chr3R_14180001	ZS11_1-HE
2383	chr3R	14246398	14246413	chr3R	14247895	14247909	jockey	6	1497	4.5	2.5	3.5	1.3	1511	chr3R	14246398	intergenic	not near genes	chr3R	14247154	intergenic	not near genes	chr3R	14247909	intergenic	not near genes	chr3R_6_14245001	chr3R_14245001	ZS11_1-HE
2410	chr3R	15041419	15041451	chr3R	15045188	15045220	Doc	20	3769	3.5	5.0	4.2	3.8	3801	chr3R	15041419	intergenic	not near genes	chr3R	15043320	intergenic	not near genes	chr3R	15045220	intergenic	not near genes	chr3R_20_15040001	chr3R_15040001	ZS11_1-HE
2411	chr3R	15079816	15079839	chr3R	15080058	15080081	pogo	11	241	3.5	4.0	3.8	2.3	265	chr3R	15079816	3` UTR	CG6966 -	chr3R	15079948	3` UTR	CG6966 -	chr3R	15080081	3` UTR	CG6966 -	chr3R_11_15075001	chr3R_15075001	ZS11_1-HE
2413	chr3R	15102493	15102528	chr3R	15109753	15109784	412	7	7258	5.0	2.0	3.5	1.6	7291	chr3R	15102493	intron	CG42788 -	chr3R	15106138	intron	CG42788 -	chr3R	15109784	intron	CG42788 -	chr3R_7_15105001	chr3R_15105001	ZS11_1-HE
2416	chr3R	15132059	15132090	chr3R	15135120	15135130	Juan	25	3060	8.5	16.5	12.5	1.9	3071	chr3R	15132059	intergenic	CG42788 -	chr3R	15133594	intergenic	not near genes	chr3R	15135130	intergenic	CG6912 -	chr3R_25_15130001	chr3R_15130001	ZS11_1-HE
2420	chr3R	15162547	15162579	chr3R	15167315	15167347	F-element	18	4768	3.5	5.5	4.5	3.3	4800	chr3R	15162547	intron	Gyc88E +	chr3R	15164947	intron	Gyc88E +	chr3R	15167347	intron	Gyc88E +	chr3R_18_15160001	chr3R_15160001	ZS11_1-HE
2429	chr3R	15601165	15601196	chr3R	15608685	15608719	412	20	7523	12.0	10.5	11.2	1.6	7554	chr3R	15601165	intergenic	not near genes	chr3R	15604942	intergenic	not near genes	chr3R	15608719	intergenic	not near genes	chr3R_20_15600001	chr3R_15600001	ZS11_1-HE
2431	chr3R	15618748	15618760	chr3R	15626223	15626235	blood	9	7475	3.5	3.5	3.5	2.0	7487	chr3R	15618748	intergenic	not near genes	chr3R	15622492	intergenic	not near genes	chr3R	15626235	intergenic	not near genes	chr3R_9_15620001	chr3R_15620001	ZS11_1-HE
2443	chr3R	16189407	16189439	chr3R	16189811	16189843	invader4	7	404	7.0	5.0	6.0	1.0	436	chr3R	16189407	intron	sra +	chr3R	16189625	intron	sra +	chr3R	16189843	intron	sra +	chr3R_7_16185001	chr3R_16185001	ZS11_1-HE
2454	chr3R	16756318	16756351	chr3R	16762510	16762543	diver	10	6192	2.5	3.5	3.0	2.5	6225	chr3R	16756318	intron	bxd -	chr3R	16759430	intron	bxd -	chr3R	16762543	intron	bxd -	chr3R_10_16755001	chr3R_16755001	ZS11_1-HE
2464	chr3R	17294666	17294687	chr3R	17295095	17295116	BS	6	427	7.5	5.0	6.2	0.8	450	chr3R	17294666	intergenic	not near genes	chr3R	17294891	intergenic	not near genes	chr3R	17295116	intergenic	not near genes	chr3R_6_17290001	chr3R_17290001	ZS11_1-HE
2465	chr3R	17346688	17346717	chr3R	17348252	17348281	F-element	20	1564	5.0	7.0	6.0	2.9	1593	chr3R	17346688	intron	beat-IIa -	chr3R	17347484	intron	beat-IIa -	chr3R	17348281	intron	beat-IIa -	chr3R_20_17345001	chr3R_17345001	ZS11_1-HE
2472	chr3R	17591310	17591320	chr3R	17591747	17591757	F-element	4	437	4.5	5.0	4.8	0.7	447	chr3R	17591310	intergenic	not near genes	chr3R	17591534	intergenic	not near genes	chr3R	17591757	intergenic	not near genes	chr3R_4_17590001	chr3R_17590001	ZS11_1-HE
2473	chr3R	17638314	17638330	chr3R	17638801	17638817	roo	13	486	0.0	5.5	2.8	3.4	503	chr3R	17638314	intron	CG43175 +	chr3R	17638566	intron	CG43175 +	chr3R	17638817	intron,intron	CG43175 +,CR45222 +	chr3R_13_17635001	chr3R_17635001	ZS11_1-HE
2475	chr3R	17657651	17657661	chr3R	17657803	17657813	INE-1	9	152	0.0	3.0	1.5	3.6	162	chr3R	17657651	intron	CG14322 +	chr3R	17657732	intron	CG14322 +	chr3R	17657813	intron	CG14322 +	chr3R_9_17655001	chr3R_17655001	ZS11_1-HE
2484	chr3R	17925852	17925889	chr3R	17927320	17927357	hobo	25	1466	3.5	10.5	7.0	3.1	1505	chr3R	17925852	intron	cpo +	chr3R	17926604	intron	cpo +	chr3R	17927357	intron	cpo +	chr3R_25_17925001	chr3R_17925001	ZS11_1-HE
2489	chr3R	18032786	18032806	chr3R	18040460	18040473	opus	7	7673	0.0	3.0	1.5	2.8	7687	chr3R	18032786	intergenic	not near genes	chr3R	18036630	intergenic	not near genes	chr3R	18040473	intergenic	not near genes	chr3R_7_18035001	chr3R_18035001	ZS11_1-HE
2491	chr3R	18061582	18061600	chr3R	18063151	18063169	F-element	16	1569	0.0	1.0	0.5	10.7	1587	chr3R	18061582	intergenic	not near genes	chr3R	18062376	intergenic	not near genes	chr3R	18063169	intergenic	not near genes	chr3R_16_18060001	chr3R_18060001	ZS11_1-HE
2512	chr3R	18606507	18606534	chr3R	18610740	18610767	F-element	12	4233	0.0	10.5	5.2	1.9	4260	chr3R	18606507	intron,intron	qin +,CG14304 -	chr3R	18608637	intron,intron	qin +,CG14304 -	chr3R	18610767	intron,intron	qin +,CG14304 -	chr3R_12_18605001	chr3R_18605001	ZS11_1-HE
2535	chr3R	19106827	19106848	chr3R	19106910	19106941	1360	4	82	4.5	0.0	2.2	1.2	114	chr3R	19106827	intron	CG6040 +	chr3R	19106884	intron	CG6040 +	chr3R	19106941	intron	CG6040 +	chr3R_4_19105001	chr3R_19105001	ZS11_1-HE
2563	chr3R	20109538	20109566	chr3R	20114745	20114773	copia	19	5207	7.0	6.5	6.8	2.4	5235	chr3R	20109538	intergenic	not near genes	chr3R	20112156	intergenic	not near genes	chr3R	20114773	intergenic	CG10887 +	chr3R_19_20110001	chr3R_20110001	ZS11_1-HE
2566	chr3R	20156690	20156721	chr3R	20165861	20165892	roo	9	9171	6.5	3.5	5.0	1.5	9202	chr3R	20156690	intergenic	not near genes	chr3R	20161291	intergenic	not near genes	chr3R	20165892	intergenic	not near genes	chr3R_9_20160001	chr3R_20160001	ZS11_1-HE
2571	chr3R	20245276	20245304	chr3R	20248887	20248915	F-element	7	3611	5.0	4.5	4.8	1.2	3639	chr3R	20245276	3` UTR	Nlg4 +	chr3R	20247096	intergenic	not near genes	chr3R	20248915	intergenic	not near genes	chr3R_7_20245001	chr3R_20245001	ZS11_1-HE
2573	chr3R	20266513	20266542	chr3R	20272985	20273014	Burdock	21	6472	0.5	8.0	4.2	4.0	6501	chr3R	20266513	intron	cic +	chr3R	20269764	intron	cic +	chr3R	20273014	intron	cic +	chr3R_21_20265001	chr3R_20265001	ZS11_1-HE
2576	chr3R	20331004	20331032	chr3R	20331491	20331519	roo	13	487	5.0	4.0	4.5	2.4	515	chr3R	20331004	intergenic	Sirt2 +	chr3R	20331262	intergenic	Sirt2 +	chr3R	20331519	intergenic	not near genes	chr3R_13_20330001	chr3R_20330001	ZS11_1-HE
2583	chr3R	20506584	20506614	chr3R	20507388	20507418	BS	4	804	5.0	5.5	5.2	0.6	834	chr3R	20506584	intergenic	Or92a +	chr3R	20507001	intergenic	CG4288 -	chr3R	20507418	3` UTR	CG4288 -	chr3R_4_20505001	chr3R_20505001	ZS11_1-HE
2584	chr3R	20513005	20513037	chr3R	20515709	20515741	opus	8	2704	3.0	6.0	4.5	1.5	2736	chr3R	20513005	intergenic	not near genes	chr3R	20514373	intergenic	not near genes	chr3R	20515741	intergenic	not near genes	chr3R_8_20510001	chr3R_20510001	ZS11_1-HE
2594	chr3R	20854482	20854496	chr3R	20859273	20859287	Doc	4	4791	7.5	4.0	5.8	0.6	4805	chr3R	20854482	intron	Ir93a -	chr3R	20856884	intron	Ir93a -	chr3R	20859287	exon	Ir93a -	chr3R_4_20855001	chr3R_20855001	ZS11_1-HE
2601	chr3R	21141677	21141704	chr3R	21150159	21150173	Tirant	12	8479	5.5	5.0	5.2	1.9	8496	chr3R	21141677	intron	SNF4Agamma +	chr3R	21145925	intron	SNF4Agamma +	chr3R	21150173	intron	SNF4Agamma +	chr3R_12_21145001	chr3R_21145001	ZS11_1-HE
2621	chr3R	21609001	21609040	chr3R	21611636	21611667	NOF	28	2630	6.0	4.5	5.2	4.5	2666	chr3R	21609001	intron	InR -	chr3R	21610334	intron	InR -	chr3R	21611667	intron	InR -	chr3R_28_21610001	chr3R_21610001	ZS11_1-HE
2626	chr3R	21761116	21761151	chr3R	21768509	21768544	mdg1	12	7393	2.5	2.0	2.2	3.8	7428	chr3R	21761116	exon	CG42335 +	chr3R	21764830	intron	CG42335 +	chr3R	21768544	exon	CG42335 +	chr3R_12_21760001	chr3R_21760001	ZS11_1-HE
2643	chr3R	22450543	22450579	chr3R	22453183	22453220	NOF	17	2641	3.0	7.0	5.0	2.8	2677	chr3R	22450543	intron	CG34376 +	chr3R	22451882	intron	CG34376 +	chr3R	22453220	intron	CG34376 +	chr3R_17_22450001	chr3R_22450001	ZS11_1-HE
2655	chr3R	22881198	22881219	chr3R	22884905	22884926	Doc	14	3707	3.0	5.0	4.0	2.8	3728	chr3R	22881198	intergenic	not near genes	chr3R	22883062	intergenic	not near genes	chr3R	22884926	intergenic	not near genes	chr3R_14_22880001	chr3R_22880001	ZS11_1-HE
2666	chr3R	23558404	23558427	chr3R	23560186	23560209	Bari1	19	1782	1.0	13.0	7.0	2.4	1805	chr3R	23558404	intron	beat-IV +	chr3R	23559306	intron	beat-IV +	chr3R	23560209	intron	beat-IV +	chr3R_19_23555001	chr3R_23555001	ZS11_1-HE
2670	chr3R	23684719	23684723	chr3R	23685182	23685210	roo	5	482	3.0	6.5	4.8	0.9	491	chr3R	23684719	intron	CG18754 +	chr3R	23684964	intron	CG18754 +	chr3R	23685210	exon	CG18754 +	chr3R_5_23680001	chr3R_23680001	ZS11_1-HE
2673	chr3R	23835408	23835424	chr3R	23844559	23844575	roo	12	9151	8.5	0.0	4.2	2.3	9167	chr3R	23835408	intron	CG34355 +	chr3R	23839992	intron	CG34355 +	chr3R	23844575	intron	CG34355 +	chr3R_12_23835001	chr3R_23835001	ZS11_1-HE
2679	chr3R	24072082	24072090	chr3R	24072521	24072529	jockey	4	439	11.5	0.0	5.8	0.6	447	chr3R	24072082	intron	4EHP -	chr3R	24072306	intron	4EHP -	chr3R	24072529	intron	4EHP -	chr3R_4_24070001	chr3R_24070001	ZS11_1-HE
2680	chr3R	24076913	24076944	chr3R	24078381	24078412	hobo	8	1468	4.5	7.5	6.0	1.1	1499	chr3R	24076913	intron	4EHP -	chr3R	24077662	intron	4EHP -	chr3R	24078412	intron	4EHP -	chr3R_8_24075001	chr3R_24075001	ZS11_1-HE
2682	chr3R	24207214	24207241	chr3R	24212293	24212320	flea	17	5079	4.0	6.0	5.0	2.8	5106	chr3R	24207214	intron	twin -	chr3R	24209767	intron	twin -	chr3R	24212320	intron	twin -	chr3R_17_24205001	chr3R_24205001	ZS11_1-HE
2687	chr3R	24493273	24493311	chr3R	24493503	24493542	BS	27	230	11.5	9.0	10.2	2.4	269	chr3R	24493273	intergenic	not near genes	chr3R	24493408	intergenic	not near genes	chr3R	24493542	intergenic	not near genes	chr3R_27_24490001	chr3R_24490001	ZS11_1-HE
2692	chr3R	24730090	24730117	chr3R	24732469	24732496	Doc	5	2379	4.5	0.0	2.2	1.6	2406	chr3R	24730090	intron	tok +	chr3R	24731293	intron	tok +	chr3R	24732496	intron	tok +	chr3R_5_24730001	chr3R_24730001	ZS11_1-HE
2695	chr3R	24927121	24927164	chr3R	24931913	24931956	Doc	18	4792	2.0	4.0	3.0	4.5	4835	chr3R	24927121	intergenic	Trf4-2 +	chr3R	24929538	intergenic	not near genes	chr3R	24931956	intergenic	CG11771 +	chr3R_18_24925001	chr3R_24925001	ZS11_1-HE
2711	chr3R	25832696	25832717	chr3R	25841879	25841898	roo	9	9183	3.5	8.0	5.8	1.3	9202	chr3R	25832696	exon	alpha4GT2 +	chr3R	25837297	intron	alpha4GT2 +	chr3R	25841898	exon	alpha4GT2 +	chr3R_9_25835001	chr3R_25835001	ZS11_1-HE
2715	chr3R	26108823	26108840	chr3R	26117407	26117424	Tirant	8	8584	6.0	0.0	3.0	2.0	8601	chr3R	26108823	5` UTR	CG31324 +	chr3R	26113124	intron	CG31324 +	chr3R	26117424	intron	CG31324 +	chr3R_8_26110001	chr3R_26110001	ZS11_1-HE
2723	chr3R	26376321	26376351	chr3R	26385482	26385512	roo	19	9161	6.5	3.5	5.0	3.2	9191	chr3R	26376321	intergenic	not near genes	chr3R	26380916	intergenic	not near genes	chr3R	26385512	intergenic	not near genes	chr3R_19_26380001	chr3R_26380001	ZS11_1-HE
2724	chr3R	26510499	26510532	chr3R	26519561	26519594	roo	24	9062	10.0	8.5	9.2	2.4	9095	chr3R	26510499	intron	plum -	chr3R	26515046	intron	plum -	chr3R	26519594	intron,5` UTR	plum -,CR45226 +	chr3R_24_26515001	chr3R_26515001	ZS11_1-HE
2725	chr3R	26558325	26558360	chr3R	26565639	26565673	Stalker4	4	7314	3.5	5.0	4.2	0.8	7348	chr3R	26558325	intron	scrib +	chr3R	26561999	intron	scrib +	chr3R	26565673	intron	scrib +	chr3R_4_26560001	chr3R_26560001	ZS11_1-HE
2734	chr3R	27007402	27007437	chr3R	27016538	27016573	roo	19	9136	4.5	5.0	4.8	3.3	9171	chr3R	27007402	intron	RYa-R +	chr3R	27011988	intron	RYa-R +	chr3R	27016573	intron	RYa-R +	chr3R_19_27010001	chr3R_27010001	ZS11_1-HE
2740	chr3R	27140514	27140548	chr3R	27148125	27148159	412	22	7611	5.0	10.0	7.5	2.6	7645	chr3R	27140514	intron	CG6051 -	chr3R	27144336	intron	CG6051 -	chr3R	27148159	intron	CG6051 -	chr3R_22_27140001	chr3R_27140001	ZS11_1-HE
2749	chr3R	27342790	27342823	chr3R	27351372	27351405	Tirant	15	8582	4.0	2.0	3.0	3.8	8615	chr3R	27342790	intron	CG42534 +	chr3R	27347098	intron	CG42534 +	chr3R	27351405	intron	CG42534 +	chr3R_15_27345001	chr3R_27345001	ZS11_1-HE
2755	chr3R	27521161	27521191	chr3R	27530371	27530401	roo	8	9210	1.0	3.5	2.2	2.5	9240	chr3R	27521161	intron	CG12885 +	chr3R	27525781	intron	CG12885 +	chr3R	27530401	intron	CG12885 +	chr3R_8_27525001	chr3R_27525001	ZS11_1-HE
2762	chr3R	27725565	27725600	chr3R	27731008	27731044	I-element	5	5443	3.5	3.5	3.5	1.1	5479	chr3R	27725565	intergenic	not near genes	chr3R	27728304	intergenic	not near genes	chr3R	27731044	intergenic	not near genes	chr3R_5_27725001	chr3R_27725001	ZS11_1-HE
2767	chr3R	27856760	27856776	chr3R	27858243	27858260	hopper2	23	1484	22.0	10.0	16.0	1.4	1500	chr3R	27856760	intron	CG34353 -	chr3R	27857510	intron	CG34353 -	chr3R	27858260	intron	CG34353 -	chr3R_23_27855001	chr3R_27855001	ZS11_1-HE
2768	chr3R	27856777	27856792	chr3R	27858240	27858276	hopper2	16	1483	12.0	8.5	10.2	1.4	1499	chr3R	27856777	intron	CG34353 -	chr3R	27857526	intron	CG34353 -	chr3R	27858276	intron	CG34353 -	chr3R_16_27855001	chr3R_27855001	ZS11_1-HE
2769	chr3R	27862953	27862987	chr3R	27868259	27868293	Transpac	6	5306	0.0	5.5	2.8	1.6	5340	chr3R	27862953	intron	CG34353 -	chr3R	27865623	intron	CG34353 -	chr3R	27868293	intron	CG34353 -	chr3R_6_27865001	chr3R_27865001	ZS11_1-HE
2770	chr3R	27875697	27875733	chr3R	27882753	27882789	297	25	7056	6.0	8.0	7.0	3.1	7092	chr3R	27875697	intron	CG34353 -	chr3R	27879243	intron	CG34353 -	chr3R	27882789	intron	CG34353 -	chr3R_25_27875001	chr3R_27875001	ZS11_1-HE
2773	chr3R	28068495	28068527	chr3R	28073938	28073970	I-element	13	5443	4.5	3.5	4.0	2.6	5475	chr3R	28068495	intron	CG34362 +	chr3R	28071232	intron	CG34362 +	chr3R	28073970	intron	CG34362 +	chr3R_13_28070001	chr3R_28070001	ZS11_1-HE
2775	chr3R	28173669	28173705	chr3R	28181100	28181136	mdg1	5	7431	1.0	2.5	1.8	1.8	7467	chr3R	28173669	intron	CG34354 +	chr3R	28177402	intron	CG34354 +	chr3R	28181136	intron	CG34354 +	chr3R_5_28175001	chr3R_28175001	ZS11_1-HE
2777	chr3R	28253342	28253367	chr3R	28255853	28255878	jockey	15	2511	7.0	9.5	8.2	1.6	2536	chr3R	28253342	intergenic	not near genes	chr3R	28254610	intergenic	not near genes	chr3R	28255878	intergenic	not near genes	chr3R_15_28250001	chr3R_28250001	ZS11_1-HE
2779	chr3R	28302116	28302122	chr3R	28302559	28302565	jockey	8	443	0.0	8.5	4.2	1.5	449	chr3R	28302116	intergenic	not near genes	chr3R	28302340	intergenic	not near genes	chr3R	28302565	intergenic	not near genes	chr3R_8_28300001	chr3R_28300001	ZS11_1-HE
2787	chr3R	28758287	28758304	chr3R	28763905	28763922	roo	7	5618	6.5	0.0	3.2	1.7	5635	chr3R	28758287	intergenic	aqrs -	chr3R	28761104	intergenic	not near genes	chr3R	28763922	intergenic	not near genes	chr3R_7_28760001	chr3R_28760001	ZS11_1-HE
2797	chr3R	29079376	29079411	chr3R	29080749	29080784	NOF	22	1373	8.0	0.0	4.0	4.4	1408	chr3R	29079376	intron	CG11873 +	chr3R	29080080	intron	CG11873 +	chr3R	29080784	intron	CG11873 +	chr3R_22_29080001	chr3R_29080001	ZS11_1-HE
2804	chr3R	29319821	29319859	chr3R	29320141	29320179	jockey	23	319	3.5	7.5	5.5	3.5	358	chr3R	29319821	intergenic	Cnx99A -	chr3R	29320000	intergenic	Cnx99A -	chr3R	29320179	intergenic	not near genes	chr3R_23_29320001	chr3R_29320001	ZS11_1-HE
2811	chr3R	29406617	29406650	chr3R	29407904	29407916	jockey	16	1286	3.5	5.0	4.2	3.1	1299	chr3R	29406617	intron	Ptp99A +	chr3R	29407266	intron	Ptp99A +	chr3R	29407916	intron	Ptp99A +	chr3R_16_29405001	chr3R_29405001	ZS11_1-HE
2824	chr3R	29738263	29738298	chr3R	29739731	29739766	hobo	14	1467	5.0	4.5	4.8	2.4	1503	chr3R	29738263	intergenic	CG1969 +,CG7598 +	chr3R	29739014	intron	CG1969 +	chr3R	29739766	5` UTR	CG1969 +	chr3R_14_29735001	chr3R_29735001	ZS11_1-HE
2825	chr3R	29760368	29760392	chr3R	29761570	29761594	pogo	6	1202	2.0	4.5	3.2	1.4	1226	chr3R	29760368	intergenic	not near genes	chr3R	29760981	intergenic	not near genes	chr3R	29761594	intergenic	not near genes	chr3R_6_29760001	chr3R_29760001	ZS11_1-HE
2827	chr3R	29882022	29882049	chr3R	29891180	29891207	roo	8	9157	1.0	3.0	2.0	2.7	9185	chr3R	29882022	intron	CG31038 +	chr3R	29886614	intron	CG31038 +	chr3R	29891207	intron	CG31038 +	chr3R_8_29885001	chr3R_29885001	ZS11_1-HE
2836	chr3R	30084849	30084886	chr3R	30086316	30086354	hobo	13	1468	5.0	3.5	4.2	2.5	1505	chr3R	30084849	intron	sima +	chr3R	30085602	intron	sima +	chr3R	30086354	intron	sima +	chr3R_13_30085001	chr3R_30085001	ZS11_1-HE
2840	chr3R	30238758	30238791	chr3R	30239923	30239956	1360	11	1165	5.0	0.0	2.5	3.1	1198	chr3R	30238758	intergenic	not near genes	chr3R	30239357	intergenic	not near genes	chr3R	30239956	intergenic	not near genes	chr3R_11_30235001	chr3R_30235001	ZS11_1-HE
2846	chr3R	30317335	30317346	chr3R	30324928	30324939	roo	8	7593	0.5	5.5	3.0	2.0	7604	chr3R	30317335	intron	hdc +	chr3R	30321137	intron	hdc +	chr3R	30324939	intron	hdc +	chr3R_8_30320001	chr3R_30320001	ZS11_1-HE
2849	chr3R	30396215	30396247	chr3R	30404482	30404514	roo	14	8267	7.5	7.5	7.5	1.6	8299	chr3R	30396215	intergenic	not near genes	chr3R	30400364	intergenic	not near genes	chr3R	30404514	5` UTR	CR45570 +	chr3R_14_30400001	chr3R_30400001	ZS11_1-HE
2854	chr3R	30480473	30480509	chr3R	30482942	30482978	jockey	17	2469	2.0	2.5	2.2	5.3	2505	chr3R	30480473	intron	PH4alphaEFB +	chr3R	30481726	intron	PH4alphaEFB +	chr3R	30482978	intron	PH4alphaEFB +	chr3R_17_30480001	chr3R_30480001	ZS11_1-HE
2860	chr3R	30679516	30679548	chr3R	30686986	30687018	blood	12	7470	2.5	4.5	3.5	2.7	7502	chr3R	30679516	intergenic	not near genes	chr3R	30683267	intergenic	not near genes	chr3R	30687018	intergenic	not near genes	chr3R_12_30680001	chr3R_30680001	ZS11_1-HE
2865	chr3R	30818807	30818839	chr3R	30820373	30820405	1360	15	1566	6.5	3.0	4.8	2.6	1598	chr3R	30818807	intron	cindr +	chr3R	30819606	intron	cindr +	chr3R	30820405	intron	cindr +	chr3R_15_30815001	chr3R_30815001	ZS11_1-HE
2870	chr3R	31074233	31074252	chr3R	31081832	31081851	springer	11	7599	5.0	0.0	2.5	3.1	7618	chr3R	31074233	intron	Sox100B +	chr3R	31078042	intron	Sox100B +	chr3R	31081851	intron	Sox100B +	chr3R_11_31075001	chr3R_31075001	ZS11_1-HE
2874	chr3R	31279374	31279409	chr3R	31285566	31285601	diver	11	6192	4.0	3.5	3.8	2.3	6227	chr3R	31279374	intergenic	not near genes	chr3R	31282488	intergenic	not near genes	chr3R	31285601	intergenic	not near genes	chr3R_11_31280001	chr3R_31280001	ZS11_1-HE
2877	chr3R	31413089	31413123	chr3R	31418290	31418324	copia	14	5201	2.5	8.5	5.5	2.2	5235	chr3R	31413089	intron	Gprk2 +	chr3R	31415706	intron	Gprk2 +	chr3R	31418324	intron	Gprk2 +	chr3R_14_31415001	chr3R_31415001	ZS11_1-HE
2886	chr3R	31691531	31691563	chr3R	31696298	31696330	Doc	17	4767	6.5	8.0	7.2	2.1	4799	chr3R	31691531	intergenic	not near genes	chr3R	31693930	intergenic	not near genes	chr3R	31696330	intergenic	not near genes	chr3R_17_31690001	chr3R_31690001	ZS11_1-HE
2903	chr3R	31997989	31998025	chr3R	32005460	32005496	blood	25	7471	8.0	8.0	8.0	2.8	7507	chr3R	31997989	intron	heph -	chr3R	32001742	intron	heph -	chr3R	32005496	intron	heph -	chr3R_25_32000001	chr3R_32000001	ZS11_1-HE
2908	chr4	292328	292350	chr4	292568	292590	INE-1	7	240	0.0	1.0	0.5	4.7	262	chr4	292328	intron	Syt7 -	chr4	292459	intron	Syt7 -	chr4	292590	intron	Syt7 -	chr4_7_290001	chr4_290001	ZS11_1-HE
2909	chr4	319987	320017	chr4	328164	328194	Stalker2	4	8177	4.5	5.0	4.8	0.7	8207	chr4	319987	3` UTR	CG32850 +	chr4	324090	intron	CG32850 +	chr4	328194	3` UTR,3` UTR	CG32850 +,PMCA -	chr4_4_320001	chr4_320001	ZS11_1-HE
2910	chr4	671602	671635	chr4	680186	680219	Tirant	20	8583	8.0	7.5	7.8	2.3	8617	chr4	671602	intron	CG11360 +	chr4	675910	intron	CG11360 +	chr4	680219	intron	CG11360 +	chr4_20_675001	chr4_675001	ZS11_1-HE
2913	chr4	896642	896680	chr4	898304	898342	INE-1	16	1662	47.5	38.0	42.8	0.4	1700	chr4	896642	intron	unc-13 -	chr4	897492	intron	unc-13 -	chr4	898342	intron	unc-13 -	chr4_16_895001	chr4_895001	ZS11_1-HE
2919	chrX	295857	295881	chrX	303478	303502	412	23	7621	12.5	8.5	10.5	2.0	7645	chrX	295857	intron	CG3777 +	chrX	299680	intron	CG3777 +	chrX	303502	intron	CG3777 +	chrX_23_295001	chrX_295001	ZS11_1-HE
2920	chrX	318469	318500	chrX	323556	323587	flea	28	5087	9.5	6.5	8.0	3.1	5118	chrX	318469	intron,intron	CG3777 +,CG32816 -	chrX	321028	intron,intron	CG3777 +,CG32816 -	chrX	323587	intron,intron	CG3777 +,CG32816 -	chrX_28_320001	chrX_320001	ZS11_1-HE
2922	chrX	428418	428450	chrX	434604	434636	3S18	15	6186	7.0	8.5	7.8	1.7	6218	chrX	428418	intron	CG32816 -	chrX	431527	intron	CG32816 -	chrX	434636	intron	CG32816 -	chrX_15_430001	chrX_430001	ZS11_1-HE
2924	chrX	551419	551455	chrX	558982	559018	412	32	7562	15.5	11.5	13.5	2.2	7599	chrX	551419	intron	Appl +	chrX	555218	intron	Appl +	chrX	559018	intron	Appl +	chrX_32_555001	chrX_555001	ZS11_1-HE
2934	chrX	812265	812299	chrX	817897	817931	297	14	5632	6.5	5.0	5.8	2.1	5666	chrX	812265	intron	CG43867 -	chrX	815098	intron	CG43867 -	chrX	817931	intron	CG43867 -	chrX_14_815001	chrX_815001	ZS11_1-HE
2935	chrX	827598	827635	chrX	835391	835428	roo	26	7793	5.5	7.0	6.2	3.6	7830	chrX	827598	intron	CG43867 -	chrX	831513	intron	CG43867 -	chrX	835428	intron	CG43867 -	chrX_26_830001	chrX_830001	ZS11_1-HE
2940	chrX	906700	906733	chrX	908490	908523	S-element	25	1790	7.5	8.0	7.8	2.8	1823	chrX	906700	intron	CG43867 -	chrX	907612	intron	CG43867 -	chrX	908523	intron	CG43867 -	chrX_25_905001	chrX_905001	ZS11_1-HE
2945	chrX	1357771	1357807	chrX	1367942	1367978	Doc	20	10171	10.0	5.5	7.8	2.3	10207	chrX	1357771	intergenic	png -	chrX	1362874	intergenic	not near genes	chrX	1367978	intergenic	not near genes	chrX_20_1360001	chrX_1360001	ZS11_1-HE
2947	chrX	1518033	1518070	chrX	1523436	1523447	jockey	8	5400	4.0	0.0	2.0	2.7	5414	chrX	1518033	intergenic	inc +	chrX	1520740	intergenic	not near genes	chrX	1523447	intergenic	not near genes	chrX_8_1520001	chrX_1520001	ZS11_1-HE
2948	chrX	1627971	1628003	chrX	1635440	1635462	gtwin	33	7468	14.5	12.5	13.5	2.3	7491	chrX	1627971	intron,intron	Mur2B -,br +	chrX	1631716	intron,intron	Mur2B -,br +	chrX	1635462	intron,intron	Mur2B -,br +	chrX_33_1630001	chrX_1630001	ZS11_1-HE
2949	chrX	1930534	1930570	chrX	1938106	1938142	opus	11	7572	4.0	4.0	4.0	2.2	7608	chrX	1930534	intergenic	CG11596 +	chrX	1934338	intergenic	not near genes	chrX	1938142	3` UTR	CG3857 -	chrX_11_1930001	chrX_1930001	ZS11_1-HE
2950	chrX	1954885	1954919	chrX	1962825	1962860	Stalker2	6	7940	4.0	3.0	3.5	1.3	7975	chrX	1954885	intron	Hr4 +	chrX	1958872	intron	Hr4 +	chrX	1962860	intron	Hr4 +	chrX_6_1955001	chrX_1955001	ZS11_1-HE
2954	chrX	2399834	2399860	chrX	2408188	2408214	roo	12	8354	8.0	1.5	4.8	2.1	8380	chrX	2399834	intergenic	not near genes	chrX	2404024	intergenic	not near genes	chrX	2408214	intergenic	not near genes	chrX_12_2400001	chrX_2400001	ZS11_1-HE
2961	chrX	2664393	2664401	chrX	2665540	2665548	1360	10	1147	0.0	0.0	0.0	10.0	1155	chrX	2664393	intron	sgg +	chrX	2664970	intron	sgg +	chrX	2665548	intron	sgg +	chrX_10_2660001	chrX_2660001	ZS11_1-HE
2963	chrX	2844895	2844930	chrX	2852306	2852341	mdg1	24	7411	8.5	5.5	7.0	3.0	7446	chrX	2844895	intron	kirre +	chrX	2848618	intron	kirre +	chrX	2852341	intron	kirre +	chrX_24_2845001	chrX_2845001	ZS11_1-HE
2968	chrX	3075632	3075647	chrX	3080942	3080957	Transpac	8	5310	5.0	0.5	2.8	2.1	5325	chrX	3075632	intron	kirre +	chrX	3078294	intron	kirre +	chrX	3080957	intron	kirre +	chrX_8_3075001	chrX_3075001	ZS11_1-HE
2972	chrX	3218506	3218537	chrX	3227656	3227687	roo	4	9150	2.0	1.5	1.8	1.4	9181	chrX	3218506	intron	dnc +	chrX	3223096	intron	dnc +	chrX	3227687	intron	dnc +	chrX_4_3220001	chrX_3220001	ZS11_1-HE
2982	chrX	3415015	3415050	chrX	3421201	3421236	3S18	15	6186	0.0	6.5	3.2	3.6	6221	chrX	3415015	intron,intron	CR44999 +,CG12535 -	chrX	3418126	intron,intron	CR44999 +,CG12535 -	chrX	3421236	intron,intron	CR44999 +,CG12535 -	chrX_15_3415001	chrX_3415001	ZS11_1-HE
2986	chrX	3493092	3493122	chrX	3502252	3502282	roo	11	9160	1.5	1.0	1.2	5.0	9190	chrX	3493092	intron,intron	CR44999 +,Gas8 -	chrX	3497687	intron,intron	CR44999 +,Gas8 -	chrX	3502282	intron,intron	CR44999 +,Gas8 -	chrX_11_3495001	chrX_3495001	ZS11_1-HE
2989	chrX	3597552	3597578	chrX	3619721	3619747	roo	21	22169	0.0	5.5	2.8	5.5	22195	chrX	3597552	intron	AstA-R1 +	chrX	3608650	intron	AstA-R1 +	chrX	3619747	intron	AstA-R1 +	chrX_21_3605001	chrX_3605001	ZS11_1-HE
2993	chrX	3726758	3726792	chrX	3730156	3730190	NOF	22	3396	7.5	0.0	3.8	4.6	3432	chrX	3726758	intron	tlk +	chrX	3728474	intron	tlk +	chrX	3730190	intron	tlk +	chrX_22_3725001	chrX_3725001	ZS11_1-HE
3000	chrX	3986868	3986896	chrX	3994494	3994530	412	16	7634	5.0	0.0	2.5	4.6	7662	chrX	3986868	intergenic	not near genes	chrX	3990699	intergenic	not near genes	chrX	3994530	intergenic	not near genes	chrX_16_3990001	chrX_3990001	ZS11_1-HE
3005	chrX	4157889	4157924	chrX	4164925	4164960	297	39	7036	19.0	12.0	15.5	2.4	7071	chrX	4157889	intron	Fas2 -	chrX	4161424	intron	Fas2 -	chrX	4164960	intron	Fas2 -	chrX_39_4160001	chrX_4160001	ZS11_1-HE
3025	chrX	4700389	4700428	chrX	4700733	4700772	jockey	14	344	5.0	5.0	5.0	2.3	383	chrX	4700389	3` UTR	ctp +	chrX	4700580	3` UTR	ctp +	chrX	4700772	3` UTR	ctp +	chrX_14_4700001	chrX_4700001	ZS11_1-HE
3027	chrX	4731812	4731837	chrX	4736906	4736924	jockey	9	5093	5.5	2.0	3.8	1.9	5112	chrX	4731812	intergenic	not near genes	chrX	4734368	intergenic	not near genes	chrX	4736924	intergenic	not near genes	chrX_9_4730001	chrX_4730001	ZS11_1-HE
3029	chrX	4763250	4763285	chrX	4763739	4763774	Stalker4	12	489	4.5	3.5	4.0	2.4	524	chrX	4763250	intergenic	not near genes	chrX	4763512	intergenic	not near genes	chrX	4763774	intergenic	not near genes	chrX_12_4760001	chrX_4760001	ZS11_1-HE
3031	chrX	4792380	4792411	chrX	4792814	4792845	jockey	9	434	2.0	4.5	3.2	2.1	465	chrX	4792380	intergenic	not near genes	chrX	4792612	intergenic	not near genes	chrX	4792845	intergenic	not near genes	chrX_9_4790001	chrX_4790001	ZS11_1-HE
3033	chrX	4827967	4828002	chrX	4835339	4835374	Stalker4	21	7371	7.0	3.5	5.2	3.4	7407	chrX	4827967	intergenic	not near genes	chrX	4831670	intergenic	not near genes	chrX	4835374	intergenic	not near genes	chrX_21_4830001	chrX_4830001	ZS11_1-HE
3038	chrX	4990041	4990077	chrX	4997256	4997292	roo	22	7215	1.0	2.5	1.8	7.9	7251	chrX	4990041	intron	CR44833 -	chrX	4993666	intron	CR44833 -	chrX	4997292	intron	CR44833 -	chrX_22_4990001	chrX_4990001	ZS11_1-HE
3042	chrX	5096289	5096306	chrX	5103855	5103872	springer	7	7566	0.0	13.5	6.8	0.9	7583	chrX	5096289	intron,intron	CG15465 +,rg +	chrX	5100080	intron,intron	CG15465 +,rg +	chrX	5103872	intron,intron	CG15465 +,rg +	chrX_7_5100001	chrX_5100001	ZS11_1-HE
3047	chrX	5338702	5338730	chrX	5339956	5339983	jockey	14	1254	4.5	6.5	5.5	2.2	1281	chrX	5338702	intergenic	not near genes	chrX	5339342	intergenic	not near genes	chrX	5339983	intergenic	SK +	chrX_14_5335001	chrX_5335001	ZS11_1-HE
3058	chrX	5524855	5524874	chrX	5528719	5528738	412	5	3864	2.0	3.0	2.5	1.4	3883	chrX	5524855	intergenic	snoRNA:Psi28S-3342 -	chrX	5526796	intergenic	not near genes	chrX	5528738	intergenic	Vsx2 -	chrX_5_5525001	chrX_5525001	ZS11_1-HE
3066	chrX	5883807	5883841	chrX	5884049	5884083	pogo	17	242	2.5	2.0	2.2	5.3	276	chrX	5883807	intron	CR45668 -	chrX	5883945	intron	CR45668 -	chrX	5884083	intron	CR45668 -	chrX_17_5880001	chrX_5880001	ZS11_1-HE
3067	chrX	5884159	5884193	chrX	5884401	5884435	pogo	5	242	0.5	0.0	0.2	4.2	276	chrX	5884159	intron	CR45668 -	chrX	5884297	intron	CR45668 -	chrX	5884435	intron	CR45668 -	chrX_5_5880001	chrX_5880001	ZS11_1-HE
3069	chrX	6171583	6171616	chrX	6179015	6179048	Quasimodo	25	7432	5.5	5.0	5.2	4.0	7465	chrX	6171583	intron	Ca-alpha1T -	chrX	6175316	intron	Ca-alpha1T -	chrX	6179048	intron	Ca-alpha1T -	chrX_25_6175001	chrX_6175001	ZS11_1-HE
3074	chrX	6335223	6335243	chrX	6337734	6337754	Tirant	10	2511	0.5	6.0	3.2	2.4	2531	chrX	6335223	intergenic	not near genes	chrX	6336488	intergenic	not near genes	chrX	6337754	intergenic	CG3842 +	chrX_10_6335001	chrX_6335001	ZS11_1-HE
3076	chrX	6392868	6392902	chrX	6397634	6397668	Doc	10	4766	1.0	2.0	1.5	4.0	4800	chrX	6392868	intergenic	not near genes	chrX	6395268	intergenic	not near genes	chrX	6397668	intergenic	not near genes	chrX_10_6395001	chrX_6395001	ZS11_1-HE
3077	chrX	6445318	6445334	chrX	6451077	6451093	297	9	5759	7.5	6.0	6.8	1.2	5775	chrX	6445318	intron	CG42340 -	chrX	6448206	intron	CG42340 -	chrX	6451093	intron	CG42340 -	chrX_9_6445001	chrX_6445001	ZS11_1-HE
3079	chrX	6562816	6562851	chrX	6571299	6571334	Tirant	14	8483	2.5	6.0	4.2	2.7	8518	chrX	6562816	intron	CG34417 +	chrX	6567075	intron	CG34417 +	chrX	6571334	intron	CG34417 +	chrX_14_6565001	chrX_6565001	ZS11_1-HE
3093	chrX	7023599	7023634	chrX	7030990	7031017	Tabor	16	7390	6.0	2.5	4.2	3.1	7418	chrX	7023599	intron	CG12541 -	chrX	7027308	intron	CG12541 -	chrX	7031017	intron	CG12541 -	chrX_16_7025001	chrX_7025001	ZS11_1-HE
3097	chrX	7125243	7125272	chrX	7134403	7134432	roo	18	9160	3.0	7.0	5.0	3.0	9189	chrX	7125243	intergenic	not near genes	chrX	7129838	intergenic	not near genes	chrX	7134432	intergenic	not near genes	chrX_18_7125001	chrX_7125001	ZS11_1-HE
3106	chrX	7702903	7702940	chrX	7703343	7703380	jockey	49	440	10.0	17.0	13.5	3.4	477	chrX	7702903	intron	CHES-1-like -	chrX	7703142	intron	CHES-1-like -	chrX	7703380	intron	CHES-1-like -	chrX_49_7700001	chrX_7700001	ZS11_1-HE
3107	chrX	7784233	7784241	chrX	7784536	7784544	jockey	7	303	3.0	4.5	3.8	1.5	311	chrX	7784233	intergenic	not near genes	chrX	7784388	intergenic	not near genes	chrX	7784544	intergenic	not near genes	chrX_7_7780001	chrX_7780001	ZS11_1-HE
3112	chrX	7845724	7845756	chrX	7847216	7847246	hopper2	14	1492	5.5	5.5	5.5	2.2	1522	chrX	7845724	intergenic	not near genes	chrX	7846485	intergenic	not near genes	chrX	7847246	intergenic	not near genes	chrX_14_7845001	chrX_7845001	ZS11_1-HE
3118	chrX	8031431	8031458	chrX	8035741	8035768	Juan	17	4310	4.0	9.5	6.8	2.2	4337	chrX	8031431	intergenic	not near genes	chrX	8033600	intergenic	not near genes	chrX	8035768	3` UTR	CG2233 -	chrX_17_8030001	chrX_8030001	ZS11_1-HE
3125	chrX	8364844	8364877	chrX	8365242	8365275	BS	25	398	6.5	9.0	7.8	2.8	431	chrX	8364844	intron	nAChRalpha3 -	chrX	8365060	intron	nAChRalpha3 -	chrX	8365275	intron	nAChRalpha3 -	chrX_25_8365001	chrX_8365001	ZS11_1-HE
3140	chrX	8922324	8922362	chrX	8922759	8922797	jockey	27	434	2.5	6.0	4.2	5.2	473	chrX	8922324	intron	rdgA +	chrX	8922560	intron	rdgA +	chrX	8922797	intron	rdgA +	chrX_27_8920001	chrX_8920001	ZS11_1-HE
3141	chrX	8927587	8927617	chrX	8929858	8929888	NOF	18	2271	7.5	4.0	5.8	2.6	2301	chrX	8927587	intron	rdgA +	chrX	8928738	intron	rdgA +	chrX	8929888	intron	rdgA +	chrX_18_8925001	chrX_8925001	ZS11_1-HE
3142	chrX	8948774	8948789	chrX	8956285	8956300	roo	6	7511	4.0	9.0	6.5	0.8	7526	chrX	8948774	intron	rdgA +	chrX	8952537	intron	rdgA +	chrX	8956300	intron	rdgA +	chrX_6_8950001	chrX_8950001	ZS11_1-HE
3153	chrX	9508151	9508164	chrX	9509670	9509683	jockey	8	1519	7.0	6.0	6.5	1.1	1532	chrX	9508151	intron	CG32700 -	chrX	9508917	intron	CG32700 -	chrX	9509683	intron	CG32700 -	chrX_8_9505001	chrX_9505001	ZS11_1-HE
3154	chrX	9575791	9575815	chrX	9576116	9576140	mdg3	8	325	4.0	4.0	4.0	1.6	349	chrX	9575791	intron,exon	CG32699 -,CG42395 -	chrX	9575966	intron,intron	CG32699 -,CG42395 -	chrX	9576140	intron,5` UTR	CG32699 -,CG42395 -	chrX_8_9575001	chrX_9575001	ZS11_1-HE
3155	chrX	9744057	9744063	chrX	12649915	12649918	gypsy5	6	2905858	24.0	7.5	15.8	0.4	2905861	chrX	9744057	intron	Sp1 +	chrX	11196988	intergenic	not near genes	chrX	12649918	intron	Tomosyn +	chrX_6_11195001	chrX_11195001	ZS11_1-HE
3163	chrX	10138218	10138248	chrX	10145723	10145753	412	14	7505	2.5	4.5	3.5	3.1	7535	chrX	10138218	intron,intron	RhoU +,CR44894 -	chrX	10141986	intron,intron	RhoU +,CR44894 -	chrX	10145753	intron,intron	RhoU +,CR44894 -	chrX_14_10140001	chrX_10140001	ZS11_1-HE
3170	chrX	10267299	10267336	chrX	10276450	10276487	roo	19	9151	5.0	2.5	3.8	4.0	9188	chrX	10267299	3` UTR	alpha-Man-I -	chrX	10271893	intron	alpha-Man-I -	chrX	10276487	3` UTR	alpha-Man-I -	chrX_19_10270001	chrX_10270001	ZS11_1-HE
3172	chrX	10525062	10525075	chrX	10532132	10532142	297	7	7070	10.0	4.0	7.0	0.9	7080	chrX	10525062	intron	spri -	chrX	10528602	intron	spri -	chrX	10532142	intron	spri -	chrX_7_10525001	chrX_10525001	ZS11_1-HE
3174	chrX	10550852	10550887	chrX	10552320	10552355	hobo	14	1467	6.5	6.5	6.5	1.9	1503	chrX	10550852	intron	spri -	chrX	10551604	intron	spri -	chrX	10552355	intron	spri -	chrX_14_10550001	chrX_10550001	ZS11_1-HE
3177	chrX	10686048	10686084	chrX	10691186	10691222	roo	33	5138	5.0	7.5	6.2	4.6	5174	chrX	10686048	intron	X11Lbeta +	chrX	10688635	intron	X11Lbeta +	chrX	10691222	intron	X11Lbeta +	chrX_33_10685001	chrX_10685001	ZS11_1-HE
3186	chrX	11184249	11184284	chrX	11189326	11189361	flea	9	5077	4.5	4.0	4.2	1.7	5112	chrX	11184249	intergenic	not near genes	chrX	11186805	intergenic	not near genes	chrX	11189361	intergenic	not near genes	chrX_9_11185001	chrX_11185001	ZS11_1-HE
3188	chrX	11194452	11194458	chrX	11201851	11201880	gypsy5	6	7418	4.0	9.0	6.5	0.8	7428	chrX	11194452	intergenic	not near genes	chrX	11198166	intergenic	not near genes	chrX	11201880	intergenic	CG11106 +	chrX_6_11195001	chrX_11195001	ZS11_1-HE
3192	chrX	11312060	11312094	chrX	11319414	11319440	Stalker2	10	7353	1.5	4.0	2.8	2.6	7380	chrX	11312060	intergenic	not near genes	chrX	11315750	intergenic	not near genes	chrX	11319440	intergenic	not near genes	chrX_10_11315001	chrX_11315001	ZS11_1-HE
3198	chrX	11571454	11571483	chrX	11571696	11571725	pogo	12	241	4.0	6.0	5.0	2.0	271	chrX	11571454	3` UTR	Kmn1 -	chrX	11571590	3` UTR	Kmn1 -	chrX	11571725	3` UTR	Kmn1 -	chrX_12_11570001	chrX_11570001	ZS11_1-HE
3199	chrX	11633414	11633443	chrX	11640469	11640502	297	8	7058	13.0	0.0	6.5	1.1	7088	chrX	11633414	intron	Ptp10D +	chrX	11636958	intron	Ptp10D +	chrX	11640502	intron	Ptp10D +	chrX_8_11635001	chrX_11635001	ZS11_1-HE
3200	chrX	11645108	11645140	chrX	11648278	11648311	NOF	12	3170	5.5	9.0	7.2	1.5	3203	chrX	11645108	intron	Ptp10D +	chrX	11646710	intron	Ptp10D +	chrX	11648311	intron	Ptp10D +	chrX_12_11645001	chrX_11645001	ZS11_1-HE
3209	chrX	12168139	12168166	chrX	12173582	12173609	I-element	15	5443	4.5	12.0	8.2	1.6	5470	chrX	12168139	intron	Ten-a +	chrX	12170874	intron	Ten-a +	chrX	12173609	intron	Ten-a +	chrX_15_12170001	chrX_12170001	ZS11_1-HE
3212	chrX	12301955	12301989	chrX	12303261	12303296	X-element	17	1306	1.5	5.5	3.5	3.8	1341	chrX	12301955	intron	Ten-a +	chrX	12302626	intron	Ten-a +	chrX	12303296	intron	Ten-a +	chrX_17_12300001	chrX_12300001	ZS11_1-HE
3215	chrX	12381895	12381904	chrX	12385797	12385807	flea	6	3903	0.0	17.5	8.8	0.6	3912	chrX	12381895	intergenic	not near genes	chrX	12383851	intergenic	not near genes	chrX	12385807	intergenic	not near genes	chrX_6_12380001	chrX_12380001	ZS11_1-HE
3231	chrX	12930598	12930607	chrX	12937715	12937724	HMS-Beagle	4	7117	8.0	6.5	7.2	0.5	7126	chrX	12930598	intron	fne +	chrX	12934161	intron	fne +	chrX	12937724	intron	fne +	chrX_4_12930001	chrX_12930001	ZS11_1-HE
3250	chrX	13403024	13403043	chrX	13403152	13403171	X-element	7	128	4.0	3.0	3.5	1.6	147	chrX	13403024	intergenic	CG12725 -	chrX	13403098	intergenic	CG12725 -	chrX	13403171	intergenic	CG12725 -	chrX_7_13400001	chrX_13400001	ZS11_1-HE
3251	chrX	13429459	13429470	chrX	13430609	13430620	jockey	5	1150	5.0	3.5	4.2	1.0	1161	chrX	13429459	intergenic	not near genes	chrX	13430040	intergenic	not near genes	chrX	13430620	intergenic	not near genes	chrX_5_13430001	chrX_13430001	ZS11_1-HE
3253	chrX	13463643	13463676	chrX	13469221	13469254	mdg3	11	5578	2.5	4.0	3.2	2.6	5611	chrX	13463643	intron	Neto +	chrX	13466448	intron	Neto +	chrX	13469254	intron	Neto +	chrX_11_13465001	chrX_13465001	ZS11_1-HE
3263	chrX	13937982	13938001	chrX	13941254	13941273	I-element	8	3272	3.0	1.5	2.2	2.5	3291	chrX	13937982	intron	mamo -	chrX	13939628	intron	mamo -	chrX	13941273	intron	mamo -	chrX_8_13935001	chrX_13935001	ZS11_1-HE
3265	chrX	14105019	14105056	chrX	14114171	14114208	roo	17	9152	6.5	3.5	5.0	2.8	9189	chrX	14105019	intergenic	not near genes	chrX	14109614	intergenic	not near genes	chrX	14114208	5` UTR	CR44657 +	chrX_17_14105001	chrX_14105001	ZS11_1-HE
3267	chrX	14157598	14157611	chrX	14163256	14163269	297	8	5658	0.0	4.5	2.2	2.5	5671	chrX	14157598	intergenic	not near genes	chrX	14160434	intergenic	not near genes	chrX	14163269	intergenic	not near genes	chrX_8_14160001	chrX_14160001	ZS11_1-HE
3273	chrX	14416299	14416320	chrX	14421068	14421089	F-element	14	4769	9.5	6.5	8.0	1.6	4790	chrX	14416299	intron	dpr8 +	chrX	14418694	intron	dpr8 +	chrX	14421089	intron	dpr8 +	chrX_14_14415001	chrX_14415001	ZS11_1-HE
3278	chrX	14589686	14589706	chrX	14589928	14589948	pogo	10	242	4.0	5.0	4.5	1.8	262	chrX	14589686	intron	CG9413 -	chrX	14589817	intron	CG9413 -	chrX	14589948	intron	CG9413 -	chrX_10_14585001	chrX_14585001	ZS11_1-HE
3283	chrX	14636460	14636491	chrX	14641902	14641933	I-element	22	5441	8.0	7.0	7.5	2.6	5473	chrX	14636460	intron	NetA -	chrX	14639196	intron	NetA -	chrX	14641933	intron	NetA -	chrX_22_14635001	chrX_14635001	ZS11_1-HE
3287	chrX	14778028	14778058	chrX	14782826	14782856	Doc	10	4798	4.0	3.5	3.8	2.1	4828	chrX	14778028	intergenic	CG5347 +	chrX	14780442	intergenic	not near genes	chrX	14782856	intergenic	Ag5r2 -	chrX_10_14780001	chrX_14780001	ZS11_1-HE
3291	chrX	14818762	14818794	chrX	14823967	14823999	copia	11	5203	4.5	3.5	4.0	2.2	5237	chrX	14818762	intron	rut -	chrX	14821380	intron	rut -	chrX	14823999	intron	rut -	chrX_11_14820001	chrX_14820001	ZS11_1-HE
3301	chrX	15273702	15273738	chrX	15274869	15274905	1360	23	1165	6.5	10.5	8.5	2.4	1203	chrX	15273702	intergenic	not near genes	chrX	15274304	intergenic	not near genes	chrX	15274905	intergenic	not near genes	chrX_23_15270001	chrX_15270001	ZS11_1-HE
3304	chrX	15413047	15413086	chrX	15417350	15417384	Juan	42	4302	12.0	11.5	11.8	3.3	4337	chrX	15413047	intron	Cngl -	chrX	15415216	intron	Cngl -	chrX	15417384	intron	Cngl -	chrX_42_15415001	chrX_15415001	ZS11_1-HE
3305	chrX	15421909	15421914	chrX	15423430	15423435	pogo	5	1521	16.5	5.5	11.0	0.4	1526	chrX	15421909	intron	Cngl -	chrX	15422672	intron	Cngl -	chrX	15423435	intron	Cngl -	chrX_5_15420001	chrX_15420001	ZS11_1-HE
3325	chrX	16222766	16222785	chrX	16231146	16231165	roo	12	8380	0.0	4.5	2.2	3.8	8399	chrX	16222766	intergenic	not near genes	chrX	16226966	intergenic	not near genes	chrX	16231165	intergenic	not near genes	chrX_12_16225001	chrX_16225001	ZS11_1-HE
3329	chrX	16340688	16340694	chrX	16349846	16349852	roo	5	9158	0.0	4.0	2.0	1.7	9164	chrX	16340688	intergenic	Dsp1 +	chrX	16345270	intergenic	not near genes	chrX	16349852	intergenic	sl +	chrX_5_16345001	chrX_16345001	ZS11_1-HE
3331	chrX	16492643	16492679	chrX	16498221	16498257	mdg3	30	5578	6.0	8.5	7.2	3.7	5614	chrX	16492643	intron	para -	chrX	16495450	intron	para -	chrX	16498257	intron	para -	chrX_30_16495001	chrX_16495001	ZS11_1-HE
3343	chrX	16936016	16936035	chrX	16936435	16936452	jockey	4	418	1.0	3.5	2.2	1.2	436	chrX	16936016	intron	CG4928 +	chrX	16936234	intron	CG4928 +	chrX	16936452	intron	CG4928 +	chrX_4_16935001	chrX_16935001	ZS11_1-HE
3367	chrX	17556941	17556949	chrX	17557441	17557449	mdg1	5	500	9.5	4.5	7.0	0.6	508	chrX	17556941	intron	CG43658 -	chrX	17557195	intron	CG43658 -	chrX	17557449	intron	CG43658 -	chrX_5_17555001	chrX_17555001	ZS11_1-HE
3368	chrX	17556954	17556977	chrX	17557440	17557455	mdg1	4	483	5.0	4.5	4.8	0.7	501	chrX	17556954	intron	CG43658 -	chrX	17557204	intron	CG43658 -	chrX	17557455	intron	CG43658 -	chrX_4_17555001	chrX_17555001	ZS11_1-HE
3376	chrX	17792957	17792980	chrX	17796256	17796279	flea	13	3299	8.5	9.5	9.0	1.3	3322	chrX	17792957	intron	OdsH +	chrX	17794618	intron	OdsH +	chrX	17796279	intron	OdsH +	chrX_13_17790001	chrX_17790001	ZS11_1-HE
3385	chrX	18194064	18194102	chrX	18194600	18194635	BS	33	536	6.0	6.0	6.0	4.7	571	chrX	18194064	intron	Frq2 +	chrX	18194350	intron	Frq2 +	chrX	18194635	intron	Frq2 +	chrX_33_18190001	chrX_18190001	ZS11_1-HE
3394	chrX	18429492	18429527	chrX	18434804	18434839	Transpac	12	5312	0.5	8.5	4.5	2.2	5347	chrX	18429492	intergenic	not near genes	chrX	18432166	intergenic	not near genes	chrX	18434839	intergenic	not near genes	chrX_12_18430001	chrX_18430001	ZS11_1-HE
3395	chrX	18555395	18555410	chrX	18556914	18556933	transib2	9	1523	0.0	0.0	0.0	9.0	1538	chrX	18555395	intron	Bx +	chrX	18556164	intron	Bx +	chrX	18556933	intron	Bx +	chrX_9_18555001	chrX_18555001	ZS11_1-HE
3409	chrX	19060402	19060437	chrX	19065187	19065222	Doc	17	4785	8.5	5.5	7.0	2.1	4820	chrX	19060402	intron	CG14190 +	chrX	19062812	intron	CG14190 +	chrX	19065222	intron	CG14190 +	chrX_17_19060001	chrX_19060001	ZS11_1-HE
3414	chrX	19136555	19136583	chrX	19143476	19143503	412	4	6920	5.0	4.0	4.5	0.7	6948	chrX	19136555	intergenic	not near genes	chrX	19140029	intergenic	not near genes	chrX	19143503	3` UTR	RhoGAP18B -	chrX_4_19140001	chrX_19140001	ZS11_1-HE
3424	chrX	19356986	19357019	chrX	19358428	19358444	NOF	24	1441	10.0	0.0	5.0	4.0	1458	chrX	19356986	intron	kek5 +	chrX	19357715	intron	kek5 +	chrX	19358444	intron	kek5 +	chrX_24_19355001	chrX_19355001	ZS11_1-HE
3425	chrX	19380156	19380188	chrX	19380398	19380430	pogo	21	242	13.5	13.0	13.2	1.5	274	chrX	19380156	intron	kek5 +	chrX	19380293	intron	kek5 +	chrX	19380430	intron	kek5 +	chrX_21_19380001	chrX_19380001	ZS11_1-HE
3430	chrX	19472123	19472151	chrX	19472694	19472722	jockey	9	571	3.0	3.0	3.0	2.2	599	chrX	19472123	intergenic	kek5 +	chrX	19472422	intergenic	not near genes	chrX	19472722	intergenic	not near genes	chrX_9_19470001	chrX_19470001	ZS11_1-HE
3440	chrX	19710070	19710103	chrX	19711857	19711890	S-element	18	1787	4.5	5.5	5.0	3.0	1820	chrX	19710070	intron	meso18E -	chrX	19710980	intron	meso18E -	chrX	19711890	intron	meso18E -	chrX_18_19710001	chrX_19710001	ZS11_1-HE
3445	chrX	19812300	19812307	chrX	19815652	19815659	Gypsy12A_LTR	4	3352	28.0	6.0	17.0	0.2	3359	chrX	19812300	intergenic	skpD +	chrX	19813980	intergenic	not near genes	chrX	19815659	intergenic	skpC +	chrX_4_19810001	chrX_19810001	ZS11_1-HE
3446	chrX	19812740	19812763	chrX	19816029	19816052	Gypsy12A_LTR	11	3289	54.0	29.5	41.8	0.3	3312	chrX	19812740	5` UTR	skpD +	chrX	19814396	intergenic	not near genes	chrX	19816052	intergenic	skpC +	chrX_11_19810001	chrX_19810001	ZS11_1-HE
3480	chrX	20377326	20377349	chrX	20378794	20378817	hobo	12	1467	7.5	8.0	7.8	1.4	1491	chrX	20377326	intergenic	not near genes	chrX	20378072	intergenic	not near genes	chrX	20378817	intergenic	not near genes	chrX_12_20375001	chrX_20375001	ZS11_1-HE
3490	chrX	20504135	20504157	chrX	20505656	20505679	transib2	15	1522	3.0	6.5	4.8	2.6	1544	chrX	20504135	intron	RhoGAP19D -	chrX	20504907	intron	RhoGAP19D -	chrX	20505679	intron	RhoGAP19D -	chrX_15_20500001	chrX_20500001	ZS11_1-HE
3508	chrX	20940716	20940754	chrX	20942186	20942224	hobo	20	1470	3.5	3.5	3.5	4.4	1508	chrX	20940716	intergenic	not near genes	chrX	20941470	intergenic	not near genes	chrX	20942224	intergenic	not near genes	chrX_20_20940001	chrX_20940001	ZS11_1-HE
3510	chrX	20956994	20957013	chrX	20962437	20962456	I-element	8	5443	6.5	4.5	5.5	1.2	5462	chrX	20956994	intergenic	not near genes	chrX	20959725	intergenic	not near genes	chrX	20962456	intergenic	Ser6 -	chrX_8_20955001	chrX_20955001	ZS11_1-HE
3518	chrX	21061861	21061897	chrX	21062347	21062383	roo	12	486	2.5	5.0	3.8	2.5	522	chrX	21061861	intron	bves +	chrX	21062122	intron	bves +	chrX	21062383	intron,3` UTR	bves +,CG32512 -	chrX_12_21060001	chrX_21060001	ZS11_1-HE
3539	chrX	21458692	21458730	chrX	21464129	21464167	Ivk	15	5437	4.0	7.5	5.8	2.2	5475	chrX	21458692	intergenic	not near genes	chrX	21461430	intergenic	not near genes	chrX	21464167	intergenic	not near genes	chrX_15_21460001	chrX_21460001	ZS11_1-HE
3541	chrX	21474402	21474422	chrX	21474769	21474789	1731	11	367	9.5	4.0	6.8	1.4	387	chrX	21474402	intergenic	not near genes	chrX	21474596	intergenic	not near genes	chrX	21474789	intergenic	not near genes	chrX_11_21470001	chrX_21470001	ZS11_1-HE
3555	chrX	22681479	22681482	chrX	22688938	22688941	HMS-Beagle2	4	7459	17.0	6.5	11.8	0.3	7462	chrX	22681479	intron	CR44997 +	chrX	22685210	intron	CR44997 +	chrX	22688941	intron	CR44997 +	chrX_4_22685001	chrX_22685001	ZS11_1-HE
3557	chrX	22697494	22697506	chrX	22701792	22701804	Juan	11	4298	24.0	12.5	18.2	0.6	4310	chrX	22697494	intron	CR44997 +	chrX	22699649	intron	CR44997 +	chrX	22701804	intron	CR44997 +	chrX_11_22695001	chrX_22695001	ZS11_1-HE
3558	chrX	22697507	22697522	chrX	22701789	22701820	Juan	16	4297	16.0	12.5	14.2	1.1	4313	chrX	22697507	intron	CR44997 +	chrX	22699664	intron	CR44997 +	chrX	22701820	intron	CR44997 +	chrX_16_22695001	chrX_22695001	ZS11_1-HE
3560	chrX	22771510	22771539	chrX	22774802	22774831	297	14	3291	1.5	4.0	2.8	3.7	3321	chrX	22771510	intron	CR44997 +	chrX	22773170	intron	CR44997 +	chrX	22774831	intron	CR44997 +	chrX_14_22770001	chrX_22770001	ZS11_1-HE
3562	chrX	22811993	22812005	chrX	22816766	22816778	F-element	6	4773	15.0	8.5	11.8	0.5	4785	chrX	22811993	intergenic	CG12446 -	chrX	22814386	intergenic	not near genes	chrX	22816778	intergenic	not near genes	chrX_6_22810001	chrX_22810001	ZS11_1-HE
3566	chrX	22908988	22908995	chrX	22913214	22913221	Burdock	4	4226	0.0	5.0	2.5	1.1	4233	chrX	22908988	intergenic	not near genes	chrX	22911104	intergenic	not near genes	chrX	22913221	intergenic	not near genes	chrX_4_22910001	chrX_22910001	ZS11_1-HE
3569	chrX	22996322	22996337	chrX	23003556	23003571	roo	4	7234	3.0	4.0	3.5	0.9	7249	chrX	22996322	intron,intron	stnA -,stnB -	chrX	22999946	intron,intron	stnA -,stnB -	chrX	23003571	intron,intron	stnA -,stnB -	chrX_4_22995001	chrX_22995001	ZS11_1-HE