SV#	Chr_5p	Chr_coord_5p_start	Chr_coord_5p_end	Chr_3p	Chr_coord_3p_start	Chr_coord_3p_end	repName	Reads_collapsed	avg_del_len	RefGen_3prime	Refgen_5prime	RefGen_Avg	Coverage_Ratio	size	Chr_5p	Chr_coord_5p	classification_5p	comment_5p	Chr_mid	Chr_coord_mid	classification_mid	comment_mid	Chr_3p	Chr_coord_3p	classification_3p	comment_3p	depletion_code	loci_code	libname
2	chr2L	47460	47475	chr2L	52566	52580	jockey	14	5106	16.5	14.0	15.2	0.9	5120	chr2L	47460	intron	Cda5 -	chr2L	50020	intron	Cda5 -	chr2L	52580	intron	Cda5 -	chr2L_14_50001	chr2L_50001	UG5N_1-HE
3	chr2L	47476	47492	chr2L	52564	52598	jockey	14	5104	13.0	14.0	13.5	1.0	5122	chr2L	47476	intron	Cda5 -	chr2L	50037	intron	Cda5 -	chr2L	52598	intron	Cda5 -	chr2L_14_50001	chr2L_50001	UG5N_1-HE
11	chr2L	347887	347913	chr2L	355388	355414	blood	9	7501	3.0	1.0	2.0	3.0	7527	chr2L	347887	3` UTR	Plc21C +	chr2L	351650	intron	Plc21C +	chr2L	355414	3` UTR	Plc21C +	chr2L_9_350001	chr2L_350001	UG5N_1-HE
15	chr2L	686919	686952	chr2L	695960	695993	roo	12	9040	2.5	4.5	3.5	2.7	9074	chr2L	686919	intron	ds -	chr2L	691456	intron	ds -	chr2L	695993	intron	ds -	chr2L_12_690001	chr2L_690001	UG5N_1-HE
17	chr2L	770463	770493	chr2L	772245	772275	Bari1	13	1781	2.5	4.0	3.2	3.1	1812	chr2L	770463	intergenic	not near genes	chr2L	771369	intergenic	not near genes	chr2L	772275	intergenic	CR44614 +	chr2L_13_770001	chr2L_770001	UG5N_1-HE
21	chr2L	976877	976908	chr2L	984514	984545	roo	10	7637	4.0	1.5	2.8	2.6	7668	chr2L	976877	intergenic	not near genes	chr2L	980711	intergenic	not near genes	chr2L	984545	intergenic	not near genes	chr2L_10_980001	chr2L_980001	UG5N_1-HE
26	chr2L	1220130	1220161	chr2L	1227597	1227628	blood	7	7467	5.5	0.5	3.0	1.8	7498	chr2L	1220130	intron	CG42329 +	chr2L	1223879	intron	CG42329 +	chr2L	1227628	intron	CG42329 +	chr2L_7_1220001	chr2L_1220001	UG5N_1-HE
28	chr2L	1301778	1301784	chr2L	1302318	1302324	gypsy	6	540	1.0	23.0	12.0	0.5	546	chr2L	1301778	intergenic	not near genes	chr2L	1302051	intergenic	not near genes	chr2L	1302324	intergenic	not near genes	chr2L_6_1300001	chr2L_1300001	UG5N_1-HE
32	chr2L	1570684	1570720	chr2L	1573557	1573593	F-element	29	2873	10.0	8.0	9.0	2.9	2909	chr2L	1570684	intron	haf +	chr2L	1572138	intron	haf +	chr2L	1573593	intron	haf +	chr2L_29_1570001	chr2L_1570001	UG5N_1-HE
38	chr2L	1678974	1679002	chr2L	1686440	1686468	blood	18	7465	5.5	9.5	7.5	2.1	7494	chr2L	1678974	intron	chinmo +	chr2L	1682721	intron	chinmo +	chr2L	1686468	intron	chinmo +	chr2L_18_1680001	chr2L_1680001	UG5N_1-HE
40	chr2L	1711358	1711383	chr2L	1711683	1711701	mdg3	6	324	1.0	3.5	2.2	1.9	343	chr2L	1711358	3` UTR,3` UTR	mRpL48 +,frtz -	chr2L	1711530	3` UTR	frtz -	chr2L	1711701	3` UTR	frtz -	chr2L_6_1710001	chr2L_1710001	UG5N_1-HE
51	chr2L	2100375	2100408	chr2L	2109523	2109549	roo	17	9148	6.5	8.5	7.5	2.0	9174	chr2L	2100375	intron	dpr3 -	chr2L	2104962	intron	dpr3 -	chr2L	2109549	intron	dpr3 -	chr2L_17_2100001	chr2L_2100001	UG5N_1-HE
53	chr2L	2112121	2112140	chr2L	2119779	2119803	opus	5	7661	6.5	6.5	6.5	0.7	7682	chr2L	2112121	intergenic	not near genes	chr2L	2115962	intergenic	not near genes	chr2L	2119803	intergenic	not near genes	chr2L_5_2115001	chr2L_2115001	UG5N_1-HE
60	chr2L	2294046	2294075	chr2L	2299244	2299281	copia	10	5202	1.5	2.0	1.8	3.6	5235	chr2L	2294046	intergenic	not near genes	chr2L	2296664	intergenic	not near genes	chr2L	2299281	intergenic	not near genes	chr2L_10_2295001	chr2L_2295001	UG5N_1-HE
68	chr2L	2565555	2565561	chr2L	2571629	2571635	297	5	6074	1.0	3.0	2.0	1.7	6080	chr2L	2565555	exon	Cyp309a2 -	chr2L	2568595	intron	Cyp309a2 -	chr2L	2571635	intron	Cyp309a2 -	chr2L_5_2565001	chr2L_2565001	UG5N_1-HE
72	chr2L	2661223	2661235	chr2L	2663031	2663074	I-element	8	1824	2.5	6.0	4.2	1.5	1851	chr2L	2661223	intergenic	not near genes	chr2L	2662148	intergenic	not near genes	chr2L	2663074	intergenic	not near genes	chr2L_8_2660001	chr2L_2660001	UG5N_1-HE
77	chr2L	2772614	2772628	chr2L	2779199	2779213	297	4	6585	2.0	6.0	4.0	0.8	6599	chr2L	2772614	3` UTR	Syt1 -	chr2L	2775914	intron	Syt1 -	chr2L	2779213	3` UTR	Syt1 -	chr2L_4_2775001	chr2L_2775001	UG5N_1-HE
83	chr2L	2933304	2933326	chr2L	2935482	2935504	pogo	18	2178	10.0	14.5	12.2	1.4	2200	chr2L	2933304	intron	lilli +	chr2L	2934404	intron	lilli +	chr2L	2935504	intron	lilli +	chr2L_18_2930001	chr2L_2930001	UG5N_1-HE
85	chr2L	3073029	3073065	chr2L	3078233	3078268	copia	15	5204	1.5	1.5	1.5	6.0	5239	chr2L	3073029	intron	toc -	chr2L	3075648	intron	toc -	chr2L	3078268	intron	toc -	chr2L_15_3075001	chr2L_3075001	UG5N_1-HE
90	chr2L	3202735	3202772	chr2L	3210165	3210202	mdg1	21	7429	5.5	5.0	5.2	3.4	7467	chr2L	3202735	intergenic	not near genes	chr2L	3206468	intergenic	not near genes	chr2L	3210202	intergenic	CR45336 +	chr2L_21_3205001	chr2L_3205001	UG5N_1-HE
91	chr2L	3251493	3251527	chr2L	3259059	3259093	springer	19	7566	6.0	6.0	6.0	2.7	7600	chr2L	3251493	intergenic	not near genes	chr2L	3255293	intergenic	not near genes	chr2L	3259093	intergenic	not near genes	chr2L_19_3255001	chr2L_3255001	UG5N_1-HE
99	chr2L	3388602	3388629	chr2L	3388844	3388871	pogo	9	242	3.5	4.0	3.8	1.9	269	chr2L	3388602	intergenic	CG42460 -	chr2L	3388736	intergenic	CG42460 -	chr2L	3388871	intergenic	CG42460 -,CR44791 +	chr2L_9_3385001	chr2L_3385001	UG5N_1-HE
106	chr2L	3649785	3649803	chr2L	3654988	3655006	copia	6	5203	0.0	6.0	3.0	1.5	5221	chr2L	3649785	intron	for -	chr2L	3652396	intron	for -	chr2L	3655006	intron	for -	chr2L_6_3650001	chr2L_3650001	UG5N_1-HE
120	chr2L	4066037	4066064	chr2L	4068863	4068890	Juan	16	2824	13.0	10.0	11.5	1.3	2853	chr2L	4066037	intron	ed +	chr2L	4067464	intron	ed +	chr2L	4068890	intron	ed +	chr2L_16_4065001	chr2L_4065001	UG5N_1-HE
125	chr2L	4181294	4181303	chr2L	4183927	4183936	Burdock	5	2633	4.0	10.0	7.0	0.6	2642	chr2L	4181294	intergenic	not near genes	chr2L	4182615	intergenic	not near genes	chr2L	4183936	intergenic	not near genes	chr2L_5_4180001	chr2L_4180001	UG5N_1-HE
127	chr2L	4601701	4601737	chr2L	4609143	4609179	mdg1	15	7442	3.0	4.5	3.8	3.1	7478	chr2L	4601701	intron	dp -	chr2L	4605440	intron	dp -	chr2L	4609179	intron	dp -	chr2L_15_4605001	chr2L_4605001	UG5N_1-HE
128	chr2L	4661845	4661855	chr2L	4669426	4669436	opus	6	7581	3.5	12.0	7.8	0.7	7591	chr2L	4661845	intergenic	not near genes	chr2L	4665640	intergenic	not near genes	chr2L	4669436	intergenic	not near genes	chr2L_6_4665001	chr2L_4665001	UG5N_1-HE
165	chr2L	5827709	5827739	chr2L	5836718	5836738	roo	15	9008	6.5	4.5	5.5	2.3	9029	chr2L	5827709	intron	TrissinR +	chr2L	5832224	intron	TrissinR +	chr2L	5836738	intron	TrissinR +	chr2L_15_5830001	chr2L_5830001	UG5N_1-HE
177	chr2L	6279642	6279651	chr2L	6279722	6279731	INE-1	4	80	6.5	2.0	4.2	0.8	89	chr2L	6279642	intron	Ddr +	chr2L	6279686	intron	Ddr +	chr2L	6279731	intron	Ddr +	chr2L_4_6275001	chr2L_6275001	UG5N_1-HE
194	chr2L	6876774	6876809	chr2L	6882966	6882997	diver	9	6190	2.5	6.5	4.5	1.6	6223	chr2L	6876774	intron	Nlg2 +	chr2L	6879886	intron	Nlg2 +	chr2L	6882997	intron	Nlg2 +	chr2L_9_6875001	chr2L_6875001	UG5N_1-HE
208	chr2L	7343322	7343358	chr2L	7350439	7350474	roo	12	7117	10.5	4.0	7.2	1.5	7152	chr2L	7343322	intron	Wnt6 +	chr2L	7346898	intron	Wnt6 +	chr2L	7350474	intron	Wnt6 +	chr2L_12_7345001	chr2L_7345001	UG5N_1-HE
217	chr2L	7579189	7579207	chr2L	7579381	7579399	BS	7	192	3.5	0.5	2.0	2.3	210	chr2L	7579189	intergenic	RapGAP1 -	chr2L	7579294	intergenic	RapGAP1 -	chr2L	7579399	intergenic	RapGAP1 -	chr2L_7_7575001	chr2L_7575001	UG5N_1-HE
229	chr2L	7977077	7977109	chr2L	7984052	7984073	297	4	6972	2.5	1.0	1.8	1.4	6996	chr2L	7977077	intron	Snoo -	chr2L	7980575	intron	Snoo -	chr2L	7984073	intron,5` UTR	Snoo -,CG7231 +	chr2L_4_7980001	chr2L_7980001	UG5N_1-HE
239	chr2L	8452417	8452453	chr2L	8461589	8461625	roo	8	9172	3.5	6.5	5.0	1.3	9208	chr2L	8452417	intron	fu12 -	chr2L	8457021	intron	fu12 -	chr2L	8461625	intron	fu12 -	chr2L_8_8455001	chr2L_8455001	UG5N_1-HE
241	chr2L	8594462	8594498	chr2L	8601517	8601553	297	14	7055	5.5	6.5	6.0	2.0	7091	chr2L	8594462	intron,3` UTR	Sema-1a +,CR43855 -	chr2L	8598008	intron	Sema-1a +	chr2L	8601553	intron	Sema-1a +	chr2L_14_8595001	chr2L_8595001	UG5N_1-HE
246	chr2L	8723112	8723146	chr2L	8731490	8731524	Tirant	15	8376	4.0	3.5	3.8	3.1	8412	chr2L	8723112	intron	raw -	chr2L	8727318	intron	raw -	chr2L	8731524	intron	raw -	chr2L_15_8725001	chr2L_8725001	UG5N_1-HE
253	chr2L	9000283	9000305	chr2L	9007794	9007816	roo	10	7511	4.5	6.5	5.5	1.5	7533	chr2L	9000283	intergenic	Try29F +	chr2L	9004050	intergenic	not near genes	chr2L	9007816	intergenic	not near genes	chr2L_10_9000001	chr2L_9000001	UG5N_1-HE
258	chr2L	9217970	9218002	chr2L	9222758	9222790	Doc	21	4787	10.0	12.0	11.0	1.8	4820	chr2L	9217970	intron	tai +	chr2L	9220380	intron	tai +	chr2L	9222790	intron	tai +	chr2L_21_9220001	chr2L_9220001	UG5N_1-HE
262	chr2L	9284570	9284586	chr2L	9284663	9284679	INE-1	8	93	5.5	5.5	5.5	1.2	109	chr2L	9284570	intron	Ggamma30A +	chr2L	9284624	intron	Ggamma30A +	chr2L	9284679	intron	Ggamma30A +	chr2L_8_9280001	chr2L_9280001	UG5N_1-HE
266	chr2L	9393496	9393531	chr2L	9396464	9396499	jockey	14	2967	6.5	4.5	5.5	2.2	3003	chr2L	9393496	intron	Shawl -	chr2L	9394998	intron	Shawl -	chr2L	9396499	intron	Shawl -	chr2L_14_9390001	chr2L_9390001	UG5N_1-HE
277	chr2L	9973723	9973759	chr2L	9980843	9980879	HMS-Beagle	19	7119	5.0	3.5	4.2	3.7	7156	chr2L	9973723	intergenic	not near genes	chr2L	9977301	intergenic	not near genes	chr2L	9980879	intergenic	not near genes	chr2L_19_9975001	chr2L_9975001	UG5N_1-HE
282	chr2L	10138189	10138193	chr2L	10143436	10143442	Rt1c	6	5247	2.0	9.5	5.8	0.9	5253	chr2L	10138189	intron	CG44153 -	chr2L	10140816	intron	CG44153 -	chr2L	10143442	intron	CG44153 -	chr2L_6_10140001	chr2L_10140001	UG5N_1-HE
284	chr2L	10156320	10156353	chr2L	10163791	10163824	blood	18	7470	4.5	4.5	4.5	3.3	7504	chr2L	10156320	intron,3` UTR	CG44153 -,CG4839 +	chr2L	10160072	intron	CG44153 -	chr2L	10163824	intron	CG44153 -	chr2L_18_10160001	chr2L_10160001	UG5N_1-HE
296	chr2L	10592839	10592874	chr2L	10600502	10600537	opus	23	7662	5.0	7.0	6.0	3.3	7698	chr2L	10592839	intron	Trim9 +	chr2L	10596688	intron	Trim9 +	chr2L	10600537	intron	Trim9 +	chr2L_23_10595001	chr2L_10595001	UG5N_1-HE
305	chr2L	10862840	10862878	chr2L	10864455	10864475	Rt1c	15	1611	5.5	4.0	4.8	2.6	1635	chr2L	10862840	3` UTR	CR43807 -	chr2L	10863658	intron	CR43807 -	chr2L	10864475	3` UTR	CR43807 -	chr2L_15_10860001	chr2L_10860001	UG5N_1-HE
307	chr2L	10946951	10946977	chr2L	10956167	10956193	roo	13	9215	5.0	10.0	7.5	1.5	9242	chr2L	10946951	intron	dpr2 -	chr2L	10951572	intron	dpr2 -	chr2L	10956193	intron	dpr2 -	chr2L_13_10950001	chr2L_10950001	UG5N_1-HE
326	chr2L	11540580	11540616	chr2L	11547983	11548019	Tabor	15	7402	6.0	3.5	4.8	2.6	7439	chr2L	11540580	intergenic	not near genes	chr2L	11544300	intergenic	not near genes	chr2L	11548019	intergenic	not near genes	chr2L_15_11540001	chr2L_11540001	UG5N_1-HE
328	chr2L	11563635	11563670	chr2L	11568840	11568875	copia	9	5205	4.5	8.5	6.5	1.2	5240	chr2L	11563635	intergenic	not near genes	chr2L	11566255	intergenic	not near genes	chr2L	11568875	intergenic	not near genes	chr2L_9_11565001	chr2L_11565001	UG5N_1-HE
329	chr2L	11614066	11614086	chr2L	11615546	11615573	hopper2	5	1488	4.5	5.0	4.8	0.9	1507	chr2L	11614066	intron	kek2 +	chr2L	11614820	intron	kek2 +	chr2L	11615573	intron	kek2 +	chr2L_5_11610001	chr2L_11610001	UG5N_1-HE
332	chr2L	11713505	11713534	chr2L	11720974	11721003	blood	10	7469	6.0	3.5	4.8	1.7	7498	chr2L	11713505	intergenic	not near genes	chr2L	11717254	intergenic	not near genes	chr2L	11721003	intergenic	CR44143 +	chr2L_10_11715001	chr2L_11715001	UG5N_1-HE
344	chr2L	12067313	12067342	chr2L	12074381	12074408	297	10	7068	2.0	2.5	2.2	3.1	7095	chr2L	12067313	intergenic	not near genes	chr2L	12070860	intergenic	not near genes	chr2L	12074408	intergenic	not near genes	chr2L_10_12070001	chr2L_12070001	UG5N_1-HE
360	chr2L	12558321	12558349	chr2L	12565451	12565479	HMS-Beagle	16	7130	7.0	6.5	6.8	2.1	7158	chr2L	12558321	intergenic	not near genes	chr2L	12561900	intergenic	not near genes	chr2L	12565479	intergenic	not near genes	chr2L_16_12560001	chr2L_12560001	UG5N_1-HE
365	chr2L	12728920	12728947	chr2L	12729161	12729188	pogo	18	240	6.0	4.0	5.0	3.0	268	chr2L	12728920	intron	MRP +	chr2L	12729054	intron	MRP +	chr2L	12729188	exon	MRP +	chr2L_18_12725001	chr2L_12725001	UG5N_1-HE
366	chr2L	12731055	12731087	chr2L	12735823	12735855	F-element	11	4768	8.0	1.5	4.8	1.9	4800	chr2L	12731055	intron	MRP +	chr2L	12733455	intron	MRP +	chr2L	12735855	intron	MRP +	chr2L_11_12730001	chr2L_12730001	UG5N_1-HE
367	chr2L	12739173	12739206	chr2L	12743955	12743988	Doc	15	4782	0.5	4.5	2.5	4.3	4815	chr2L	12739173	exon	MRP +	chr2L	12741580	intron	MRP +	chr2L	12743988	exon	MRP +	chr2L_15_12740001	chr2L_12740001	UG5N_1-HE
368	chr2L	12763870	12763872	chr2L	12764070	12764073	BS	5	201	0.5	6.0	3.2	1.2	203	chr2L	12763870	intergenic	not near genes	chr2L	12763972	intergenic	not near genes	chr2L	12764073	intergenic	not near genes	chr2L_5_12760001	chr2L_12760001	UG5N_1-HE
369	chr2L	12781802	12781815	chr2L	12789246	12789259	Quasimodo	15	7444	25.5	10.0	17.8	0.8	7457	chr2L	12781802	intergenic	not near genes	chr2L	12785530	intergenic	not near genes	chr2L	12789259	intergenic	not near genes	chr2L_15_12785001	chr2L_12785001	UG5N_1-HE
370	chr2L	12791602	12791641	chr2L	12795278	12795281	F-element	27	3674	13.0	11.0	12.0	2.1	3679	chr2L	12791602	intergenic	not near genes	chr2L	12793442	intergenic	not near genes	chr2L	12795281	intergenic	not near genes	chr2L_27_12790001	chr2L_12790001	UG5N_1-HE
377	chr2L	12861692	12861730	chr2L	12863160	12863198	hobo	10	1468	2.5	4.5	3.5	2.2	1506	chr2L	12861692	intergenic	not near genes	chr2L	12862445	intergenic	not near genes	chr2L	12863198	intergenic	not near genes	chr2L_10_12860001	chr2L_12860001	UG5N_1-HE
379	chr2L	12894018	12894054	chr2L	12895486	12895516	hobo	24	1465	3.5	8.0	5.8	3.5	1498	chr2L	12894018	intergenic	not near genes	chr2L	12894767	intergenic	not near genes	chr2L	12895516	intergenic	not near genes	chr2L_24_12890001	chr2L_12890001	UG5N_1-HE
380	chr2L	12933849	12933883	chr2L	12941317	12941351	blood	20	7467	6.0	8.0	7.0	2.5	7502	chr2L	12933849	intergenic	not near genes	chr2L	12937600	intergenic	not near genes	chr2L	12941351	intergenic	not near genes	chr2L_20_12935001	chr2L_12935001	UG5N_1-HE
385	chr2L	13036240	13036275	chr2L	13036483	13036518	X-element	15	243	3.5	6.0	4.8	2.6	278	chr2L	13036240	intron	CG9932 -	chr2L	13036379	intron	CG9932 -	chr2L	13036518	intron	CG9932 -	chr2L_15_13035001	chr2L_13035001	UG5N_1-HE
391	chr2L	13449461	13449493	chr2L	13456898	13456930	Quasimodo	13	7437	4.5	5.5	5.0	2.2	7469	chr2L	13449461	intron,5` UTR	CG42784 +,Hsp60D -	chr2L	13453196	intron	CG42784 +	chr2L	13456930	intron	CG42784 +	chr2L_13_13450001	chr2L_13450001	UG5N_1-HE
392	chr2L	13481448	13481475	chr2L	13482056	13482083	jockey	19	608	20.0	14.0	17.0	1.1	635	chr2L	13481448	intron	CG42784 +	chr2L	13481766	intron	CG42784 +	chr2L	13482083	intron	CG42784 +	chr2L_19_13480001	chr2L_13480001	UG5N_1-HE
393	chr2L	13560409	13560416	chr2L	13565230	13565237	F-element	4	4820	9.0	6.5	7.8	0.5	4828	chr2L	13560409	intron	kuz +	chr2L	13562823	intron	kuz +	chr2L	13565237	intron	kuz +	chr2L_4_13560001	chr2L_13560001	UG5N_1-HE
403	chr2L	13761804	13761808	chr2L	13762916	13762920	Doc	4	1112	8.5	4.5	6.5	0.5	1116	chr2L	13761804	intron	TM9SF4 +	chr2L	13762362	intron	TM9SF4 +	chr2L	13762920	intron	TM9SF4 +	chr2L_4_13760001	chr2L_13760001	UG5N_1-HE
404	chr2L	13761814	13761829	chr2L	13762913	13762933	Doc	8	1109	6.5	2.5	4.5	1.5	1119	chr2L	13761814	intron	TM9SF4 +	chr2L	13762374	intron	TM9SF4 +	chr2L	13762933	intron	TM9SF4 +	chr2L_8_13760001	chr2L_13760001	UG5N_1-HE
408	chr2L	13853083	13853118	chr2L	13862234	13862269	roo	16	9150	2.5	5.0	3.8	3.3	9186	chr2L	13853083	intron	CenG1A +	chr2L	13857676	intron	CenG1A +	chr2L	13862269	intron	CenG1A +	chr2L_16_13855001	chr2L_13855001	UG5N_1-HE
443	chr2L	14803881	14803911	chr2L	14809080	14809115	copia	13	5202	5.0	7.5	6.2	1.8	5234	chr2L	14803881	intergenic	not near genes	chr2L	14806498	intergenic	not near genes	chr2L	14809115	intergenic	not near genes	chr2L_13_14805001	chr2L_14805001	UG5N_1-HE
446	chr2L	14889950	14889988	chr2L	14890376	14890414	jockey	33	425	10.0	9.5	9.8	3.1	464	chr2L	14889950	intergenic	not near genes	chr2L	14890182	intergenic	not near genes	chr2L	14890414	intergenic	not near genes	chr2L_33_14890001	chr2L_14890001	UG5N_1-HE
450	chr2L	14984382	14984403	chr2L	14991985	14992006	opus	13	7603	11.0	7.5	9.2	1.3	7624	chr2L	14984382	intron	mol -	chr2L	14988194	intron	mol -	chr2L	14992006	intron	mol -	chr2L_13_14985001	chr2L_14985001	UG5N_1-HE
471	chr2L	15446048	15446082	chr2L	15453518	15453552	blood	19	7470	4.5	5.5	5.0	3.2	7504	chr2L	15446048	intergenic	not near genes	chr2L	15449800	intergenic	not near genes	chr2L	15453552	intergenic	not near genes	chr2L_19_15445001	chr2L_15445001	UG5N_1-HE
477	chr2L	15586412	15586442	chr2L	15593465	15593495	297	5	7048	3.5	0.0	1.8	1.8	7083	chr2L	15586412	intergenic	not near genes	chr2L	15589954	intergenic	not near genes	chr2L	15593495	intergenic	not near genes	chr2L_5_15585001	chr2L_15585001	UG5N_1-HE
488	chr2L	15955950	15955972	chr2L	15957524	15957546	hobo	13	1574	2.5	7.0	4.8	2.2	1596	chr2L	15955950	intron	beat-Ib -	chr2L	15956748	intron	beat-Ib -	chr2L	15957546	intron	beat-Ib -	chr2L_13_15955001	chr2L_15955001	UG5N_1-HE
494	chr2L	16141162	16141193	chr2L	16146370	16146401	copia	30	5207	10.5	7.5	9.0	3.0	5239	chr2L	16141162	intergenic	not near genes	chr2L	16143782	intergenic	not near genes	chr2L	16146401	intergenic	not near genes	chr2L_30_16140001	chr2L_16140001	UG5N_1-HE
496	chr2L	16153735	16153769	chr2L	16160790	16160824	297	14	7054	8.5	8.0	8.2	1.5	7089	chr2L	16153735	intergenic	not near genes	chr2L	16157280	intergenic	not near genes	chr2L	16160824	intergenic	not near genes	chr2L_14_16155001	chr2L_16155001	UG5N_1-HE
504	chr2L	16280270	16280289	chr2L	16281436	16281454	1360	6	1166	4.0	6.0	5.0	1.0	1184	chr2L	16280270	intron	crp -	chr2L	16280862	intron	crp -	chr2L	16281454	intron	crp -	chr2L_6_16280001	chr2L_16280001	UG5N_1-HE
509	chr2L	16511984	16511996	chr2L	16519112	16519124	HMS-Beagle	5	7128	2.0	4.0	3.0	1.2	7140	chr2L	16511984	intron	CG5953 -	chr2L	16515554	intron	CG5953 -	chr2L	16519124	intron	CG5953 -	chr2L_5_16515001	chr2L_16515001	UG5N_1-HE
517	chr2L	16958100	16958136	chr2L	16962889	16962925	Doc	34	4788	8.0	7.5	7.8	3.9	4825	chr2L	16958100	intergenic	not near genes	chr2L	16960512	intergenic	not near genes	chr2L	16962925	intergenic	not near genes	chr2L_34_16960001	chr2L_16960001	UG5N_1-HE
530	chr2L	17167565	17167596	chr2L	17167807	17167838	pogo	15	241	6.0	6.0	6.0	2.1	273	chr2L	17167565	intron,intron	CG34106 +,beat-IIIa +	chr2L	17167702	intron,intron	CG34106 +,beat-IIIa +	chr2L	17167838	intron,intron	CG34106 +,beat-IIIa +	chr2L_15_17165001	chr2L_17165001	UG5N_1-HE
532	chr2L	17199157	17199189	chr2L	17200625	17200657	hobo	20	1468	8.5	5.0	6.8	2.6	1500	chr2L	17199157	intron	beat-IIIc -	chr2L	17199907	intron	beat-IIIc -	chr2L	17200657	intron	beat-IIIc -	chr2L_20_17195001	chr2L_17195001	UG5N_1-HE
534	chr2L	17273188	17273230	chr2L	17277972	17278014	F-element	24	4784	4.5	8.5	6.5	3.2	4826	chr2L	17273188	intergenic	not near genes	chr2L	17275601	intergenic	not near genes	chr2L	17278014	intergenic	not near genes	chr2L_24_17275001	chr2L_17275001	UG5N_1-HE
541	chr2L	17335548	17335581	chr2L	17336715	17336748	1360	16	1167	4.5	8.0	6.2	2.2	1200	chr2L	17335548	intergenic	not near genes	chr2L	17336148	intergenic	not near genes	chr2L	17336748	intergenic	not near genes	chr2L_16_17335001	chr2L_17335001	UG5N_1-HE
547	chr2L	17432013	17432047	chr2L	17432121	17432155	1360	18	108	0.5	0.0	0.2	15.0	142	chr2L	17432013	intron	Dif -	chr2L	17432084	intron	Dif -	chr2L	17432155	intron	Dif -	chr2L_18_17430001	chr2L_17430001	UG5N_1-HE
552	chr2L	17727870	17727882	chr2L	17729338	17729350	hobo	10	1468	7.0	15.0	11.0	0.8	1480	chr2L	17727870	intron	CadN -	chr2L	17728610	intron	CadN -	chr2L	17729350	intron	CadN -	chr2L_10_17725001	chr2L_17725001	UG5N_1-HE
554	chr2L	17819919	17819953	chr2L	17825123	17825157	copia	7	5203	4.5	7.0	5.8	1.0	5238	chr2L	17819919	intron	CadN2 -	chr2L	17822538	intron	CadN2 -	chr2L	17825157	intron	CadN2 -	chr2L_7_17820001	chr2L_17820001	UG5N_1-HE
560	chr2L	17911956	17911989	chr2L	17914135	17914155	pogo	17	2178	2.5	5.5	4.0	3.4	2199	chr2L	17911956	intergenic	not near genes	chr2L	17913056	intergenic	not near genes	chr2L	17914155	intergenic	CG43271 -	chr2L_17_17910001	chr2L_17910001	UG5N_1-HE
564	chr2L	17951944	17951978	chr2L	17953412	17953446	hobo	14	1468	4.5	5.0	4.8	2.4	1502	chr2L	17951944	intergenic	CR44398 -,CR44397 -	chr2L	17952695	intergenic	not near genes	chr2L	17953446	intergenic	not near genes	chr2L_14_17950001	chr2L_17950001	UG5N_1-HE
565	chr2L	18051874	18051906	chr2L	18061022	18061054	roo	17	9147	8.0	5.0	6.5	2.3	9180	chr2L	18051874	intron	rdo +	chr2L	18056464	intron	rdo +	chr2L	18061054	intron	rdo +	chr2L_17_18055001	chr2L_18055001	UG5N_1-HE
575	chr2L	18408022	18408052	chr2L	18412807	18412837	Doc	16	4785	4.5	0.0	2.2	5.0	4815	chr2L	18408022	intergenic	not near genes	chr2L	18410430	intergenic	not near genes	chr2L	18412837	intergenic	not near genes	chr2L_16_18410001	chr2L_18410001	UG5N_1-HE
593	chr2L	19147368	19147400	chr2L	19154404	19154436	297	15	7035	8.5	9.0	8.8	1.5	7068	chr2L	19147368	intron	brat +	chr2L	19150902	intron	brat +	chr2L	19154436	intron	brat +	chr2L_15_19150001	chr2L_19150001	UG5N_1-HE
607	chr2L	19345021	19345048	chr2L	19357219	19357258	blood	20	12209	8.0	4.0	6.0	2.9	12237	chr2L	19345021	intron	dnt -	chr2L	19351140	intron	dnt -	chr2L	19357258	intron	dnt -	chr2L_20_19350001	chr2L_19350001	UG5N_1-HE
615	chr2L	19620088	19620131	chr2L	19621078	19621121	jockey	31	989	10.5	13.0	11.8	2.4	1033	chr2L	19620088	intron	Lar +	chr2L	19620604	intron	Lar +	chr2L	19621121	intron	Lar +	chr2L_31_19620001	chr2L_19620001	UG5N_1-HE
617	chr2L	19652568	19652599	chr2L	19674005	19674036	opus	15	21437	10.5	4.0	7.2	1.8	21468	chr2L	19652568	intron	Lar +	chr2L	19663302	intron	Lar +	chr2L	19674036	intron	Lar +	chr2L_15_19660001	chr2L_19660001	UG5N_1-HE
620	chr2L	19703535	19703570	chr2L	19712672	19712707	roo	27	9137	9.0	13.0	11.0	2.2	9172	chr2L	19703535	intron	Lar +	chr2L	19708121	intron	Lar +	chr2L	19712707	intron	Lar +	chr2L_27_19705001	chr2L_19705001	UG5N_1-HE
621	chr2L	19737360	19737380	chr2L	19740824	19740850	1360	14	3469	5.0	2.5	3.8	2.9	3490	chr2L	19737360	intergenic	Nf-YB +	chr2L	19739105	intergenic	not near genes	chr2L	19740850	intergenic	not near genes	chr2L_14_19735001	chr2L_19735001	UG5N_1-HE
622	chr2L	19762813	19762840	chr2L	19763056	19763083	pogo	7	243	4.0	2.5	3.2	1.7	270	chr2L	19762813	5` UTR	fbp -	chr2L	19762948	intron	fbp -	chr2L	19763083	intron	fbp -	chr2L_7_19760001	chr2L_19760001	UG5N_1-HE
630	chr2L	20005869	20005905	chr2L	20010946	20010982	flea	18	5077	3.0	3.0	3.0	4.5	5113	chr2L	20005869	intron	CG43861 -	chr2L	20008426	intron	CG43861 -	chr2L	20010982	intron	CG43861 -	chr2L_18_20005001	chr2L_20005001	UG5N_1-HE
637	chr2L	20272112	20272143	chr2L	20282824	20282855	copia	17	10712	5.0	5.5	5.2	2.7	10743	chr2L	20272112	intergenic	not near genes	chr2L	20277484	intergenic	not near genes	chr2L	20282855	intergenic	not near genes	chr2L_17_20275001	chr2L_20275001	UG5N_1-HE
639	chr2L	20303159	20303192	chr2L	20310627	20310660	blood	15	7469	0.0	6.5	3.2	3.6	7501	chr2L	20303159	intergenic	not near genes	chr2L	20306910	intergenic	not near genes	chr2L	20310660	intergenic	not near genes	chr2L_15_20305001	chr2L_20305001	UG5N_1-HE
642	chr2L	20372217	20372257	chr2L	20372468	20372499	pogo	7	248	0.5	8.0	4.2	1.3	282	chr2L	20372217	intergenic	Ugt37a1 -	chr2L	20372358	intergenic	Ugt37a1 -	chr2L	20372499	exon	Ugt37a1 -	chr2L_7_20370001	chr2L_20370001	UG5N_1-HE
649	chr2L	20568665	20568670	chr2L	20569056	20569061	X-element	5	391	8.0	5.0	6.5	0.7	396	chr2L	20568665	intron	CR45347 +	chr2L	20568863	intron	CR45347 +	chr2L	20569061	intron	CR45347 +	chr2L_5_20565001	chr2L_20565001	UG5N_1-HE
650	chr2L	20568672	20568680	chr2L	20569050	20569071	X-element	6	387	6.0	4.5	5.2	1.0	399	chr2L	20568672	intron	CR45347 +	chr2L	20568872	intron	CR45347 +	chr2L	20569071	intron	CR45347 +	chr2L_6_20565001	chr2L_20565001	UG5N_1-HE
651	chr2L	20576216	20576248	chr2L	20583685	20583717	blood	15	7468	7.0	3.0	5.0	2.5	7501	chr2L	20576216	intergenic	CR45347 +	chr2L	20579966	intergenic	not near genes	chr2L	20583717	3` UTR	CR44909 -	chr2L_15_20575001	chr2L_20575001	UG5N_1-HE
654	chr2L	20639510	20639532	chr2L	20639787	20639809	INE-1	18	276	2.5	8.0	5.2	2.9	299	chr2L	20639510	intergenic	not near genes	chr2L	20639660	intergenic	CG31680 +	chr2L	20639809	intergenic	CG31680 +	chr2L_18_20635001	chr2L_20635001	UG5N_1-HE
658	chr2L	20891533	20891544	chr2L	20896635	20896646	jockey	7	5102	3.0	5.0	4.0	1.4	5113	chr2L	20891533	intron,intron	CG43739 -,sky -	chr2L	20894090	intron,intron	CG43739 -,sky -	chr2L	20896646	intron,intron	CG43739 -,sky -	chr2L_7_20890001	chr2L_20890001	UG5N_1-HE
659	chr2L	20901474	20901488	chr2L	20902626	20902653	1360	9	1163	1.0	5.0	3.0	2.2	1179	chr2L	20901474	intron,intron	CG43739 -,sky -	chr2L	20902064	intron,intron	CG43739 -,sky -	chr2L	20902653	intron,intron	CG43739 -,sky -	chr2L_9_20900001	chr2L_20900001	UG5N_1-HE
662	chr2L	20976639	20976680	chr2L	20981455	20981496	X-element	21	4816	4.0	4.0	4.0	4.2	4857	chr2L	20976639	intron	CG42238 -	chr2L	20979068	intron	CG42238 -	chr2L	20981496	intron	CG42238 -	chr2L_21_20975001	chr2L_20975001	UG5N_1-HE
664	chr2L	21020271	21020308	chr2L	21023949	21023986	NOF	24	3678	7.0	2.5	4.8	4.1	3715	chr2L	21020271	intron	CG42238 -	chr2L	21022128	intron	CG42238 -	chr2L	21023986	intron	CG42238 -	chr2L_24_21020001	chr2L_21020001	UG5N_1-HE
666	chr2L	21041132	21041168	chr2L	21049394	21049430	Tirant	28	8261	5.5	3.5	4.5	5.1	8298	chr2L	21041132	intron	CG42238 -	chr2L	21045281	intron	CG42238 -	chr2L	21049430	intron	CG42238 -	chr2L_28_21045001	chr2L_21045001	UG5N_1-HE
678	chr2L	21347547	21347575	chr2L	21355020	21355049	blood	10	7473	6.5	5.0	5.8	1.5	7502	chr2L	21347547	intron	Tsp39D +	chr2L	21351298	intron	Tsp39D +	chr2L	21355049	intron	Tsp39D +	chr2L_10_21350001	chr2L_21350001	UG5N_1-HE
680	chr2L	21597038	21597063	chr2L	21604772	21604808	roo	17	7744	5.0	5.5	5.2	2.7	7770	chr2L	21597038	intergenic	not near genes	chr2L	21600923	intergenic	not near genes	chr2L	21604808	intergenic	not near genes	chr2L_17_21600001	chr2L_21600001	UG5N_1-HE
682	chr2L	21691824	21691860	chr2L	21698295	21698330	Burdock	19	6469	1.5	4.5	3.0	4.8	6506	chr2L	21691824	intron	CG31619 +	chr2L	21695077	intron	CG31619 +	chr2L	21698330	intron	CG31619 +	chr2L_19_21695001	chr2L_21695001	UG5N_1-HE
690	chr2L	21981682	21981715	chr2L	21990848	21990881	roo	10	9166	4.5	7.0	5.8	1.5	9199	chr2L	21981682	exon	CG2528 -	chr2L	21986282	intron	CG2528 -	chr2L	21990881	exon	CG2528 -	chr2L_10_21985001	chr2L_21985001	UG5N_1-HE
702	chr2L	22258621	22258627	chr2L	22260743	22260752	G6	8	2124	12.0	7.5	9.8	0.7	2131	chr2L	22258621	intergenic	Tif-IA +	chr2L	22259686	intergenic	not near genes	chr2L	22260752	intergenic	not near genes	chr2L_8_22255001	chr2L_22255001	UG5N_1-HE
703	chr2L	22258628	22258631	chr2L	22260753	22260756	G6	5	2125	12.0	10.0	11.0	0.4	2128	chr2L	22258628	intergenic	Tif-IA +	chr2L	22259692	intergenic	not near genes	chr2L	22260756	intergenic	not near genes	chr2L_5_22255001	chr2L_22255001	UG5N_1-HE
704	chr2L	22258632	22258648	chr2L	22260736	22260773	G6	11	2123	6.0	6.0	6.0	1.6	2141	chr2L	22258632	intergenic	Tif-IA +	chr2L	22259702	intergenic	not near genes	chr2L	22260773	intergenic	not near genes	chr2L_11_22255001	chr2L_22255001	UG5N_1-HE
707	chr2L	22548921	22548942	chr2L	22550147	22550168	1360	8	1226	0.0	9.5	4.8	1.4	1247	chr2L	22548921	intergenic	CG17490 +	chr2L	22549544	intergenic	not near genes	chr2L	22550168	intergenic	CG17493 +	chr2L_8_22545001	chr2L_22545001	UG5N_1-HE
709	chr2L	22581971	22581998	chr2L	22583761	22583788	S-element	8	1789	5.0	3.5	4.2	1.5	1817	chr2L	22581971	intron	CG17494 +	chr2L	22582880	intron	CG17494 +	chr2L	22583788	intron	CG17494 +	chr2L_8_22580001	chr2L_22580001	UG5N_1-HE
711	chr2L	22679801	22679827	chr2L	22684574	22684591	F-element	8	4772	5.5	6.0	5.8	1.2	4790	chr2L	22679801	intron	CG40006 -	chr2L	22682196	intron	CG40006 -	chr2L	22684591	intron	CG40006 -	chr2L_8_22680001	chr2L_22680001	UG5N_1-HE
715	chr2L	22776418	22776449	chr2L	22778208	22778236	S-element	5	1789	0.5	2.0	1.2	2.3	1818	chr2L	22776418	intergenic	not near genes	chr2L	22777327	intergenic	not near genes	chr2L	22778236	intergenic	not near genes	chr2L_5_22775001	chr2L_22775001	UG5N_1-HE
717	chr2R	469959	469981	chr2R	473201	473223	F-element	12	3242	5.0	6.0	5.5	1.8	3264	chr2R	469959	intergenic	not near genes	chr2R	471591	intergenic	not near genes	chr2R	473223	intergenic	not near genes	chr2R_12_470001	chr2R_470001	UG5N_1-HE
718	chr2R	529320	529357	chr2R	537946	537983	Max-element	12	8626	3.5	4.5	4.0	2.4	8663	chr2R	529320	intron	CG40378 +	chr2R	533652	intron	CG40378 +	chr2R	537983	intron	CG40378 +	chr2R_12_530001	chr2R_530001	UG5N_1-HE
719	chr2R	552753	552777	chr2R	553972	553996	1360	14	1216	9.0	7.5	8.2	1.5	1243	chr2R	552753	intron	CG40378 +	chr2R	553374	intron	CG40378 +	chr2R	553996	intron	CG40378 +	chr2R_14_550001	chr2R_550001	UG5N_1-HE
720	chr2R	552779	552788	chr2R	553971	553977	1360	7	1208	6.0	7.5	6.8	0.9	1198	chr2R	552779	intron	CG40378 +	chr2R	553378	intron	CG40378 +	chr2R	553977	intron	CG40378 +	chr2R_7_550001	chr2R_550001	UG5N_1-HE
721	chr2R	1082365	1082381	chr2R	1087138	1087158	Doc	5	4776	4.0	2.5	3.2	1.2	4793	chr2R	1082365	intron	rl +	chr2R	1084762	intron	rl +	chr2R	1087158	intron	rl +	chr2R_5_1080001	chr2R_1080001	UG5N_1-HE
727	chr2R	2046702	2046706	chr2R	2047201	2047205	gypsy5	8	499	5.5	5.0	5.2	1.3	503	chr2R	2046702	intron	CG17684 -	chr2R	2046954	intron	CG17684 -	chr2R	2047205	intron	CG17684 -	chr2R_8_2045001	chr2R_2045001	UG5N_1-HE
729	chr2R	2498981	2499018	chr2R	2508129	2508166	roo	19	9147	5.0	4.0	4.5	3.5	9185	chr2R	2498981	intron	MFS17 -	chr2R	2503574	intron	MFS17 -	chr2R	2508166	intron	MFS17 -	chr2R_19_2500001	chr2R_2500001	UG5N_1-HE
731	chr2R	2591550	2591558	chr2R	2594227	2594235	roo	5	2677	0.0	25.0	12.5	0.4	2685	chr2R	2591550	intergenic	not near genes	chr2R	2592892	intergenic	not near genes	chr2R	2594235	intergenic	not near genes	chr2R_5_2590001	chr2R_2590001	UG5N_1-HE
732	chr2R	2856609	2856624	chr2R	2857033	2857048	297	7	424	5.0	2.5	3.8	1.5	439	chr2R	2856609	intergenic	not near genes	chr2R	2856828	intergenic	not near genes	chr2R	2857048	intergenic	not near genes	chr2R_7_2855001	chr2R_2855001	UG5N_1-HE
733	chr2R	2875384	2875387	chr2R	2878900	2878900	HMS-Beagle	4	3515	34.0	44.5	39.2	0.1	3516	chr2R	2875384	intergenic	not near genes	chr2R	2877142	intergenic	not near genes	chr2R	2878900	intergenic	not near genes	chr2R_4_2875001	chr2R_2875001	UG5N_1-HE
736	chr2R	3144094	3144109	chr2R	3393373	3393388	Doc	4	249279	39.5	4.0	21.8	0.2	249294	chr2R	3144094	intron	CG42596 +	chr2R	3268741	intergenic	not near genes	chr2R	3393388	intergenic	not near genes	chr2R_4_3265001	chr2R_3265001	UG5N_1-HE
738	chr2R	3532622	3532633	chr2R	3536066	3536077	Doc	5	3444	1.5	4.5	3.0	1.2	3455	chr2R	3532622	intergenic	not near genes	chr2R	3534350	intergenic	not near genes	chr2R	3536077	intergenic	not near genes	chr2R_5_3530001	chr2R_3530001	UG5N_1-HE
744	chr2R	4622957	4622988	chr2R	4624110	4624148	1360	14	1159	4.0	5.0	4.5	2.5	1191	chr2R	4622957	intergenic	CR44101 -	chr2R	4623552	intergenic	not near genes	chr2R	4624148	intergenic	not near genes	chr2R_14_4620001	chr2R_4620001	UG5N_1-HE
748	chr2R	4838875	4838886	chr2R	4840395	4840409	transib2	7	1523	12.0	6.0	9.0	0.7	1534	chr2R	4838875	intergenic	not near genes	chr2R	4839642	intergenic	not near genes	chr2R	4840409	intergenic	not near genes	chr2R_7_4835001	chr2R_4835001	UG5N_1-HE
759	chr2R	5417991	5418026	chr2R	5420624	5420659	Burdock	15	2633	7.0	6.5	6.8	1.9	2668	chr2R	5417991	intron	laccase2 +	chr2R	5419325	intron	laccase2 +	chr2R	5420659	intron	laccase2 +	chr2R_15_5415001	chr2R_5415001	UG5N_1-HE
763	chr2R	5543202	5543222	chr2R	5547287	5547307	invader1	12	4085	0.0	11.5	5.8	1.8	4105	chr2R	5543202	intron	CG30438 +	chr2R	5545254	intron	CG30438 +	chr2R	5547307	intron	CG30438 +	chr2R_12_5545001	chr2R_5545001	UG5N_1-HE
766	chr2R	4284685	4284691	chr2R	5617503	5617509	Cr1a	4	1332818	55.0	32.0	43.5	0.1	1332824	chr2R	4284685	intergenic	not near genes	chr2R	4951097	intron	Ir41a +	chr2R	5617509	intergenic	not near genes	chr2R_4_4950001	chr2R_4950001	UG5N_1-HE
773	chr2R	5869274	5869307	chr2R	5874351	5874384	flea	19	5077	4.0	6.0	5.0	3.2	5110	chr2R	5869274	intergenic	not near genes	chr2R	5871829	intergenic	not near genes	chr2R	5874384	intergenic	not near genes	chr2R_19_5870001	chr2R_5870001	UG5N_1-HE
775	chr2R	5902155	5902189	chr2R	5909715	5909728	17.6	21	7559	4.0	6.5	5.2	3.4	7573	chr2R	5902155	intron	CG43366 +	chr2R	5905942	intron	CG43366 +	chr2R	5909728	intron	CG43366 +	chr2R_21_5905001	chr2R_5905001	UG5N_1-HE
777	chr2R	5939999	5940030	chr2R	5940093	5940124	1360	14	90	2.0	4.0	3.0	3.5	125	chr2R	5939999	intergenic	not near genes	chr2R	5940062	intergenic	not near genes	chr2R	5940124	intergenic	not near genes	chr2R_14_5940001	chr2R_5940001	UG5N_1-HE
788	chr2R	6096718	6096752	chr2R	6101916	6101933	BS	17	5194	4.5	4.0	4.2	3.3	5215	chr2R	6096718	intron	EcR -	chr2R	6099326	intron	EcR -	chr2R	6101933	intron	EcR -	chr2R_17_6095001	chr2R_6095001	UG5N_1-HE
792	chr2R	6494531	6494555	chr2R	6499294	6499318	F-element	6	4763	3.5	2.5	3.0	1.5	4787	chr2R	6494531	intergenic	not near genes	chr2R	6496924	intergenic	not near genes	chr2R	6499318	intergenic	not near genes	chr2R_6_6495001	chr2R_6495001	UG5N_1-HE
793	chr2R	6579770	6579806	chr2R	6584857	6584893	flea	12	5087	3.5	3.5	3.5	2.7	5123	chr2R	6579770	intron	jing +	chr2R	6582332	intron	jing +	chr2R	6584893	intron	jing +	chr2R_12_6580001	chr2R_6580001	UG5N_1-HE
805	chr2R	6952163	6952181	chr2R	6959744	6959762	opus	8	7581	8.0	3.5	5.8	1.2	7599	chr2R	6952163	intron,intron	mim -,CheB42c -	chr2R	6955962	intron,intron	mim -,CheB42c -	chr2R	6959762	intron,intron	mim -,CheB42c -	chr2R_8_6955001	chr2R_6955001	UG5N_1-HE
809	chr2R	7139944	7139953	chr2R	7141436	7141446	hopper2	7	1492	4.0	7.0	5.5	1.1	1502	chr2R	7139944	intergenic	not near genes	chr2R	7140695	intergenic	not near genes	chr2R	7141446	intergenic	not near genes	chr2R_7_7140001	chr2R_7140001	UG5N_1-HE
812	chr2R	7196572	7196597	chr2R	7201348	7201373	F-element	11	4776	5.0	3.5	4.2	2.1	4801	chr2R	7196572	intron	pk +	chr2R	7198972	intron	pk +	chr2R	7201373	intron	pk +	chr2R_11_7195001	chr2R_7195001	UG5N_1-HE
814	chr2R	7235820	7235851	chr2R	7240913	7240944	jockey	7	5087	1.5	1.5	1.5	2.8	5124	chr2R	7235820	intergenic	not near genes	chr2R	7238382	intergenic	not near genes	chr2R	7240944	intergenic	not near genes	chr2R_7_7235001	chr2R_7235001	UG5N_1-HE
817	chr2R	7434891	7434917	chr2R	7439193	7439219	Juan	7	4302	9.0	2.5	5.8	1.0	4328	chr2R	7434891	intergenic	so +	chr2R	7437055	intergenic	not near genes	chr2R	7439219	intergenic	not near genes	chr2R_7_7435001	chr2R_7435001	UG5N_1-HE
818	chr2R	7608406	7608425	chr2R	7613610	7613629	I-element	7	5204	11.0	0.0	5.5	1.1	5223	chr2R	7608406	intron	CG1358 -	chr2R	7611018	intron	CG1358 -	chr2R	7613629	intron	CG1358 -	chr2R_7_7610001	chr2R_7610001	UG5N_1-HE
819	chr2R	7608426	7608440	chr2R	7613609	7613623	I-element	9	5199	7.0	0.0	3.5	2.0	5197	chr2R	7608426	intron	CG1358 -	chr2R	7611024	intron	CG1358 -	chr2R	7613623	intron	CG1358 -	chr2R_9_7610001	chr2R_7610001	UG5N_1-HE
826	chr2R	7815678	7815705	chr2R	7822147	7822175	Burdock	6	6470	3.0	4.5	3.8	1.2	6497	chr2R	7815678	intergenic	CG1882 +	chr2R	7818926	intergenic	not near genes	chr2R	7822175	3` UTR	cathD -	chr2R_6_7815001	chr2R_7815001	UG5N_1-HE
827	chr2R	7869187	7869220	chr2R	7873974	7874007	Doc	22	4787	5.5	6.0	5.8	3.2	4820	chr2R	7869187	intron	Dgk -	chr2R	7871597	intron	Dgk -	chr2R	7874007	intron	Dgk -	chr2R_22_7870001	chr2R_7870001	UG5N_1-HE
839	chr2R	8330860	8330885	chr2R	8331347	8331372	roo	13	487	11.5	11.5	11.5	1.0	512	chr2R	8330860	intron	pdm3 +	chr2R	8331116	intron	pdm3 +	chr2R	8331372	intron	pdm3 +	chr2R_13_8330001	chr2R_8330001	UG5N_1-HE
840	chr2R	8398207	8398240	chr2R	8402989	8403022	Doc	14	4782	6.0	3.0	4.5	2.5	4815	chr2R	8398207	intron	CG2121 -	chr2R	8400614	intron	CG2121 -	chr2R	8403022	intron	CG2121 -	chr2R_14_8400001	chr2R_8400001	UG5N_1-HE
846	chr2R	8566032	8566066	chr2R	8566985	8567013	1360	9	949	6.5	0.0	3.2	2.1	981	chr2R	8566032	5` UTR	Cyp6a14 -	chr2R	8566522	5` UTR	Cyp6a14 -	chr2R	8567013	5` UTR	Cyp6a14 -	chr2R_9_8565001	chr2R_8565001	UG5N_1-HE
850	chr2R	8722761	8722787	chr2R	8723003	8723029	pogo	14	242	3.0	4.0	3.5	3.1	268	chr2R	8722761	intron	CG14767 -	chr2R	8722895	intron	CG14767 -	chr2R	8723029	intron	CG14767 -	chr2R_14_8720001	chr2R_8720001	UG5N_1-HE
852	chr2R	8777934	8777945	chr2R	8784139	8784150	diver	9	6205	2.0	4.0	3.0	2.2	6216	chr2R	8777934	intergenic	not near genes	chr2R	8781042	intergenic	not near genes	chr2R	8784150	intergenic	not near genes	chr2R_9_8780001	chr2R_8780001	UG5N_1-HE
856	chr2R	9151302	9151330	chr2R	9157773	9157801	Burdock	10	6470	3.5	5.0	4.2	1.9	6499	chr2R	9151302	exon	CG30345 +	chr2R	9154552	intergenic	not near genes	chr2R	9157801	intergenic	CG8008 -	chr2R_10_9150001	chr2R_9150001	UG5N_1-HE
858	chr2R	9212690	9212719	chr2R	9213177	9213206	roo	15	486	7.0	2.0	4.5	2.7	516	chr2R	9212690	intergenic	CR45309 +	chr2R	9212948	intergenic	CR45309 +	chr2R	9213206	5` UTR	CR45309 +	chr2R_15_9210001	chr2R_9210001	UG5N_1-HE
863	chr2R	9480073	9480110	chr2R	9490605	9490642	roo	12	10532	5.0	3.5	4.2	2.3	10569	chr2R	9480073	intergenic	not near genes	chr2R	9485358	intergenic	not near genes	chr2R	9490642	intergenic	not near genes	chr2R_12_9485001	chr2R_9485001	UG5N_1-HE
865	chr2R	9726611	9726646	chr2R	9734165	9734199	17.6	24	7554	7.5	7.0	7.2	2.9	7588	chr2R	9726611	intron	sqa -	chr2R	9730405	intron	sqa -	chr2R	9734199	intron	sqa -	chr2R_24_9730001	chr2R_9730001	UG5N_1-HE
867	chr2R	9871044	9871074	chr2R	9871531	9871561	roo	13	487	4.0	5.5	4.8	2.2	517	chr2R	9871044	intron	cbx -	chr2R	9871302	intron	cbx -	chr2R	9871561	intron,5` UTR	cbx -,CG18446 +	chr2R_13_9870001	chr2R_9870001	UG5N_1-HE
868	chr2R	9945437	9945459	chr2R	9945634	9945656	BS	11	196	7.0	3.5	5.2	1.8	219	chr2R	9945437	intron	Mef2 -	chr2R	9945546	intron	Mef2 -	chr2R	9945656	intron	Mef2 -	chr2R_11_9945001	chr2R_9945001	UG5N_1-HE
869	chr2R	9945460	9945467	chr2R	9945631	9945664	BS	5	192	5.5	3.0	4.2	1.0	204	chr2R	9945460	intron	Mef2 -	chr2R	9945562	intron	Mef2 -	chr2R	9945664	intron	Mef2 -	chr2R_5_9945001	chr2R_9945001	UG5N_1-HE
871	chr2R	10005848	10005880	chr2R	10007014	10007045	1360	19	1166	6.5	6.0	6.2	2.6	1197	chr2R	10005848	intron	Pka-R2 -	chr2R	10006446	intron	Pka-R2 -	chr2R	10007045	intron	Pka-R2 -	chr2R_19_10005001	chr2R_10005001	UG5N_1-HE
875	chr2R	10176876	10176908	chr2R	10186044	10186076	roo	21	9168	9.0	2.0	5.5	3.2	9200	chr2R	10176876	intron	KCNQ -	chr2R	10181476	intron	KCNQ -	chr2R	10186076	intron	KCNQ -	chr2R_21_10180001	chr2R_10180001	UG5N_1-HE
896	chr2R	10585574	10585589	chr2R	10594156	10594173	Tirant	8	8583	4.0	6.0	5.0	1.3	8599	chr2R	10585574	intron	psq +	chr2R	10589874	intron	psq +	chr2R	10594173	intron	psq +	chr2R_8_10585001	chr2R_10585001	UG5N_1-HE
897	chr2R	10622350	10622376	chr2R	10637116	10637142	mdg1	10	14766	3.5	4.0	3.8	2.1	14792	chr2R	10622350	intron	CG11883 +	chr2R	10629746	intron	CG11883 +	chr2R	10637142	intron	CG11883 +	chr2R_10_10625001	chr2R_10625001	UG5N_1-HE
905	chr2R	10948030	10948056	chr2R	10955582	10955608	17.6	14	7551	3.0	3.0	3.0	3.5	7578	chr2R	10948030	intergenic	not near genes	chr2R	10951819	intergenic	not near genes	chr2R	10955608	intergenic	not near genes	chr2R_14_10950001	chr2R_10950001	UG5N_1-HE
908	chr2R	10979658	10979687	chr2R	10980126	10980155	297	4	469	2.5	2.5	2.5	1.1	497	chr2R	10979658	intergenic	not near genes	chr2R	10979906	intergenic	not near genes	chr2R	10980155	intergenic	not near genes	chr2R_4_10975001	chr2R_10975001	UG5N_1-HE
911	chr2R	11009811	11009848	chr2R	11018986	11019023	roo	12	9175	3.5	4.0	3.8	2.5	9212	chr2R	11009811	intron	luna -	chr2R	11014417	intron	luna -	chr2R	11019023	intron	luna -	chr2R_12_11010001	chr2R_11010001	UG5N_1-HE
919	chr2R	11207812	11207849	chr2R	11208006	11208037	BS	18	194	11.0	8.5	9.8	1.7	225	chr2R	11207812	intron	shn +	chr2R	11207924	intron	shn +	chr2R	11208037	intron	shn +	chr2R_18_11205001	chr2R_11205001	UG5N_1-HE
925	chr2R	11297644	11297649	chr2R	11301966	11301971	flea	4	4322	2.5	1.5	2.0	1.3	4327	chr2R	11297644	intergenic	CG42336 -	chr2R	11299808	intergenic	not near genes	chr2R	11301971	5` UTR	CG7741 +	chr2R_4_11295001	chr2R_11295001	UG5N_1-HE
928	chr2R	11415539	11415550	chr2R	11418689	11418700	opus	10	3150	6.5	19.5	13.0	0.7	3161	chr2R	11415539	intron	Drip -	chr2R	11417120	intron	Drip -	chr2R	11418700	intron	Drip -	chr2R_10_11415001	chr2R_11415001	UG5N_1-HE
929	chr2R	11472660	11472674	chr2R	11473858	11473872	pogo	6	1198	6.0	2.5	4.2	1.2	1212	chr2R	11472660	intergenic	not near genes	chr2R	11473266	intergenic	not near genes	chr2R	11473872	intergenic	not near genes	chr2R_6_11470001	chr2R_11470001	UG5N_1-HE
951	chr2R	12481156	12481170	chr2R	12482947	12482975	roo	8	1801	2.5	6.0	4.2	1.5	1819	chr2R	12481156	exon	Dh44-R2 +	chr2R	12482066	intron	Dh44-R2 +	chr2R	12482975	intron	Dh44-R2 +	chr2R_8_12480001	chr2R_12480001	UG5N_1-HE
954	chr2R	12501692	12501724	chr2R	12503855	12503887	Rt1c	9	2163	1.0	4.0	2.5	2.6	2195	chr2R	12501692	intron	fdl -	chr2R	12502790	intron	fdl -	chr2R	12503887	intron	fdl -	chr2R_9_12500001	chr2R_12500001	UG5N_1-HE
963	chr2R	12707515	12707549	chr2R	12715882	12715916	roo	20	8367	4.0	6.0	5.0	3.3	8401	chr2R	12707515	intron	CG42663 +	chr2R	12711716	intron	CG42663 +	chr2R	12715916	intron	CG42663 +	chr2R_20_12710001	chr2R_12710001	UG5N_1-HE
966	chr2R	12789291	12789328	chr2R	12797655	12797686	roo	17	8361	4.5	5.0	4.8	2.9	8395	chr2R	12789291	intron,3` UTR	sca +,CR45137 -	chr2R	12793488	intron,intron	sca +,CR45137 -	chr2R	12797686	intron,3` UTR	sca +,CR45137 -	chr2R_17_12790001	chr2R_12790001	UG5N_1-HE
968	chr2R	12819442	12819475	chr2R	12824518	12824551	jockey	18	5075	7.0	7.0	7.0	2.2	5109	chr2R	12819442	intergenic	not near genes	chr2R	12821996	intergenic	not near genes	chr2R	12824551	intergenic	not near genes	chr2R_18_12820001	chr2R_12820001	UG5N_1-HE
974	chr2R	13136848	13136857	chr2R	13141647	13141656	Doc	5	4799	3.5	4.5	4.0	1.0	4808	chr2R	13136848	exon	Cap-G +	chr2R	13139252	intron	Cap-G +	chr2R	13141656	intron	Cap-G +	chr2R_5_13135001	chr2R_13135001	UG5N_1-HE
987	chr2R	13580500	13580526	chr2R	13580851	13580877	jockey	12	351	4.0	5.5	4.8	2.1	377	chr2R	13580500	3` UTR	CG6191 -	chr2R	13580688	3` UTR,3` UTR	CG6191 -,CG45088 -	chr2R	13580877	3` UTR,3` UTR	CG6191 -,CG45088 -	chr2R_12_13580001	chr2R_13580001	UG5N_1-HE
989	chr2R	13728131	13728167	chr2R	13735789	13735825	opus	26	7657	8.0	8.5	8.2	2.8	7694	chr2R	13728131	intron	fas +	chr2R	13731978	intron	fas +	chr2R	13735825	intron	fas +	chr2R_26_13730001	chr2R_13730001	UG5N_1-HE
991	chr2R	13905620	13905633	chr2R	13907587	13907614	Rt1a	6	1980	0.0	3.5	1.8	2.1	1994	chr2R	13905620	intron	shot -	chr2R	13906617	intron	shot -	chr2R	13907614	intron	shot -	chr2R_6_13905001	chr2R_13905001	UG5N_1-HE
1002	chr2R	14394226	14394247	chr2R	14399016	14399037	Doc	8	4790	5.5	2.5	4.0	1.6	4811	chr2R	14394226	intergenic	not near genes	chr2R	14396632	intergenic	not near genes	chr2R	14399037	intergenic	not near genes	chr2R_8_14395001	chr2R_14395001	UG5N_1-HE
1004	chr2R	14467290	14467327	chr2R	14476443	14476480	roo	15	9152	4.0	5.5	4.8	2.6	9190	chr2R	14467290	intergenic	not near genes	chr2R	14471885	intergenic	not near genes	chr2R	14476480	5` UTR	CR44462 +	chr2R_15_14470001	chr2R_14470001	UG5N_1-HE
1007	chr2R	14497385	14497420	chr2R	14498552	14498587	1360	20	1167	4.5	10.5	7.5	2.4	1202	chr2R	14497385	3` UTR	Cpsf160 -	chr2R	14497986	intron	Cpsf160 -	chr2R	14498587	3` UTR	Cpsf160 -	chr2R_20_14495001	chr2R_14495001	UG5N_1-HE
1026	chr2R	14889206	14889233	chr2R	14897815	14897842	Max-element	14	8609	5.5	0.0	2.8	3.7	8636	chr2R	14889206	intergenic	Cyp6a8 -	chr2R	14893524	intergenic	not near genes	chr2R	14897842	intergenic	not near genes	chr2R_14_14890001	chr2R_14890001	UG5N_1-HE
1032	chr2R	15004727	15004756	chr2R	15005057	15005086	jockey	15	330	6.5	3.0	4.8	2.6	359	chr2R	15004727	intergenic	not near genes	chr2R	15004906	intergenic	not near genes	chr2R	15005086	intergenic	not near genes	chr2R_15_15000001	chr2R_15000001	UG5N_1-HE
1033	chr2R	15015455	15015488	chr2R	15022879	15022913	mdg1	19	7424	0.5	4.0	2.2	5.9	7458	chr2R	15015455	intron	hbs +	chr2R	15019184	intron	hbs +	chr2R	15022913	intron	hbs +	chr2R_19_15015001	chr2R_15015001	UG5N_1-HE
1034	chr2R	15084977	15085000	chr2R	15092027	15092050	297	19	7050	5.0	6.0	5.5	2.9	7073	chr2R	15084977	intergenic	not near genes	chr2R	15088514	intergenic	not near genes	chr2R	15092050	5` UTR	CR44457 +	chr2R_19_15085001	chr2R_15085001	UG5N_1-HE
1035	chr2R	15119315	15119348	chr2R	15127797	15127830	Tirant	18	8479	10.5	8.0	9.2	1.8	8515	chr2R	15119315	intron	chn +	chr2R	15123572	intron	chn +	chr2R	15127830	intron	chn +	chr2R_18_15120001	chr2R_15120001	UG5N_1-HE
1057	chr2R	16539649	16539660	chr2R	16544857	16544868	copia	5	5208	5.0	0.5	2.8	1.3	5219	chr2R	16539649	intergenic	not near genes	chr2R	16542258	intergenic	not near genes	chr2R	16544868	intergenic	not near genes	chr2R_5_16540001	chr2R_16540001	UG5N_1-HE
1078	chr2R	17147240	17147264	chr2R	17152272	17152296	jockey	7	5032	2.5	1.5	2.0	2.3	5056	chr2R	17147240	intergenic	not near genes	chr2R	17149768	intergenic	not near genes	chr2R	17152296	intergenic	not near genes	chr2R_7_17145001	chr2R_17145001	UG5N_1-HE
1079	chr2R	17176357	17176377	chr2R	17182548	17182568	diver	11	6191	0.0	7.0	3.5	2.4	6211	chr2R	17176357	intergenic	not near genes	chr2R	17179462	intergenic	not near genes	chr2R	17182568	intergenic	not near genes	chr2R_11_17175001	chr2R_17175001	UG5N_1-HE
1082	chr2R	17236506	17236541	chr2R	17241711	17241746	copia	19	5204	2.0	5.0	3.5	4.2	5240	chr2R	17236506	intron	mbl +	chr2R	17239126	intron	mbl +	chr2R	17241746	intron	mbl +	chr2R_19_17235001	chr2R_17235001	UG5N_1-HE
1083	chr2R	17277236	17277241	chr2R	17277644	17277650	jockey	4	409	9.5	7.0	8.2	0.4	414	chr2R	17277236	intron	mbl +	chr2R	17277443	intron	mbl +	chr2R	17277650	intron	mbl +	chr2R_4_17275001	chr2R_17275001	UG5N_1-HE
1090	chr2R	17485913	17485935	chr2R	17490675	17490698	F-element	9	4763	7.0	3.5	5.2	1.5	4785	chr2R	17485913	5` UTR,intron	CG43110 -,NT5E-2 +	chr2R	17488306	intron	NT5E-2 +	chr2R	17490698	intron	NT5E-2 +	chr2R_9_17485001	chr2R_17485001	UG5N_1-HE
1094	chr2R	17782360	17782386	chr2R	17783564	17783590	pogo	9	1204	7.0	1.0	4.0	1.8	1230	chr2R	17782360	intergenic	CG33981 -,fab1 -	chr2R	17782975	intergenic	not near genes	chr2R	17783590	intergenic	mir-31a -	chr2R_9_17780001	chr2R_17780001	UG5N_1-HE
1095	chr2R	17784023	17784056	chr2R	17784265	17784298	pogo	11	242	7.0	8.0	7.5	1.3	275	chr2R	17784023	intergenic	mir-31a -	chr2R	17784160	intergenic	mir-31a -	chr2R	17784298	intergenic	mir-31a -	chr2R_11_17780001	chr2R_17780001	UG5N_1-HE
1108	chr2R	18045668	18045701	chr2R	18046021	18046054	jockey	7	353	3.5	1.0	2.2	2.2	386	chr2R	18045668	intergenic	not near genes	chr2R	18045861	intergenic	not near genes	chr2R	18046054	intergenic	CG5767 -	chr2R_7_18045001	chr2R_18045001	UG5N_1-HE
1111	chr2R	18111685	18111703	chr2R	18115554	18115572	F-element	5	3869	4.0	2.0	3.0	1.2	3887	chr2R	18111685	intergenic	not near genes	chr2R	18113628	intergenic	not near genes	chr2R	18115572	intergenic	not near genes	chr2R_5_18110001	chr2R_18110001	UG5N_1-HE
1120	chr2R	18358390	18358423	chr2R	18372603	18372636	roo	16	14213	1.5	5.5	3.5	3.6	14246	chr2R	18358390	intergenic	not near genes	chr2R	18365513	intergenic	not near genes	chr2R	18372636	intergenic	not near genes	chr2R_16_18365001	chr2R_18365001	UG5N_1-HE
1126	chr2R	18575810	18575811	chr2R	18581990	18581990	3S18	4	6182	6.0	4.5	5.2	0.6	6180	chr2R	18575810	intron	GEFmeso -	chr2R	18578900	intron	GEFmeso -	chr2R	18581990	intron	GEFmeso -	chr2R_4_18575001	chr2R_18575001	UG5N_1-HE
1127	chr2R	18575812	18575823	chr2R	18581989	18582012	3S18	9	6186	4.0	4.5	4.2	1.7	6200	chr2R	18575812	intron	GEFmeso -	chr2R	18578912	intron	GEFmeso -	chr2R	18582012	intron	GEFmeso -	chr2R_9_18575001	chr2R_18575001	UG5N_1-HE
1128	chr2R	18590864	18590901	chr2R	18600017	18600054	roo	16	9153	2.0	4.5	3.2	3.8	9190	chr2R	18590864	intron	GEFmeso -	chr2R	18595459	intron	GEFmeso -	chr2R	18600054	intron	GEFmeso -	chr2R_16_18595001	chr2R_18595001	UG5N_1-HE
1153	chr2R	19715849	19715857	chr2R	19723323	19723332	blood	4	7475	8.0	3.0	5.5	0.6	7483	chr2R	19715849	intergenic	not near genes	chr2R	19719590	intergenic	not near genes	chr2R	19723332	intergenic	not near genes	chr2R_4_19715001	chr2R_19715001	UG5N_1-HE
1154	chr2R	19776594	19776630	chr2R	19779918	19779954	jockey	10	3324	1.5	7.5	4.5	1.8	3360	chr2R	19776594	intergenic	not near genes	chr2R	19778274	intergenic	not near genes	chr2R	19779954	intergenic	not near genes	chr2R_10_19775001	chr2R_19775001	UG5N_1-HE
1157	chr2R	19914843	19914876	chr2R	19922256	19922289	mdg1	18	7413	7.0	4.5	5.8	2.6	7446	chr2R	19914843	intergenic	not near genes	chr2R	19918566	intergenic	not near genes	chr2R	19922289	intergenic	not near genes	chr2R_18_19915001	chr2R_19915001	UG5N_1-HE
1158	chr2R	19957427	19957464	chr2R	19962630	19962667	copia	13	5197	4.0	3.5	3.8	2.7	5240	chr2R	19957427	intergenic	CG44623 +	chr2R	19960047	intergenic	not near genes	chr2R	19962667	intergenic	not near genes	chr2R_13_19960001	chr2R_19960001	UG5N_1-HE
1186	chr2R	20739440	20739477	chr2R	20744209	20744246	F-element	23	4767	6.0	7.0	6.5	3.1	4806	chr2R	20739440	intron	dpr +	chr2R	20741843	intron	dpr +	chr2R	20744246	intron	dpr +	chr2R_23_20740001	chr2R_20740001	UG5N_1-HE
1187	chr2R	20783310	20783330	chr2R	20788083	20788103	F-element	12	4773	5.0	9.5	7.2	1.5	4793	chr2R	20783310	intergenic	not near genes	chr2R	20785706	intergenic	not near genes	chr2R	20788103	intergenic	CG43666 -	chr2R_12_20785001	chr2R_20785001	UG5N_1-HE
1198	chr2R	21738285	21738308	chr2R	21747445	21747463	roo	9	9159	2.5	6.5	4.5	1.6	9178	chr2R	21738285	intergenic	not near genes	chr2R	21742874	intergenic	not near genes	chr2R	21747463	intergenic	not near genes	chr2R_9_21740001	chr2R_21740001	UG5N_1-HE
1199	chr2R	21753081	21753115	chr2R	21753567	21753599	roo	26	486	7.5	5.5	6.5	3.5	518	chr2R	21753081	intergenic	not near genes	chr2R	21753340	intergenic	not near genes	chr2R	21753599	intergenic	not near genes	chr2R_26_21750001	chr2R_21750001	UG5N_1-HE
1221	chr2R	22349695	22349723	chr2R	22351480	22351507	jockey	15	1785	6.5	14.0	10.2	1.3	1812	chr2R	22349695	intron	Liprin-gamma -	chr2R	22350601	intron	Liprin-gamma -	chr2R	22351507	intron	Liprin-gamma -	chr2R_15_22350001	chr2R_22350001	UG5N_1-HE
1222	chr2R	22360381	22360398	chr2R	22360815	22360820	jockey	7	432	9.0	6.5	7.8	0.8	439	chr2R	22360381	intron	Liprin-gamma -	chr2R	22360600	intron	Liprin-gamma -	chr2R	22360820	intron	Liprin-gamma -	chr2R_7_22360001	chr2R_22360001	UG5N_1-HE
1224	chr2R	22465314	22465347	chr2R	22465514	22465547	BS	24	200	8.0	6.0	7.0	3.0	233	chr2R	22465314	intron	CG10384 +	chr2R	22465430	intron	CG10384 +	chr2R	22465547	intron	CG10384 +	chr2R_24_22465001	chr2R_22465001	UG5N_1-HE
1226	chr2R	22525745	22525785	chr2R	22529301	22529304	jockey	15	3553	4.0	4.0	4.0	3.0	3559	chr2R	22525745	intron	px -	chr2R	22527524	intron	px -	chr2R	22529304	intron	px -	chr2R_15_22525001	chr2R_22525001	UG5N_1-HE
1230	chr2R	22774961	22774999	chr2R	22775381	22775419	jockey	28	420	9.0	6.5	7.8	3.2	458	chr2R	22774961	intron	CG42260 -	chr2R	22775190	intron	CG42260 -	chr2R	22775419	intron	CG42260 -	chr2R_28_22775001	chr2R_22775001	UG5N_1-HE
1233	chr2R	22843023	22843053	chr2R	22844986	22845016	flea	12	1962	8.0	5.0	6.5	1.6	1993	chr2R	22843023	intergenic	CG9826 +	chr2R	22844020	intergenic	not near genes	chr2R	22845016	intergenic	not near genes	chr2R_12_22840001	chr2R_22840001	UG5N_1-HE
1245	chr2R	23529571	23529601	chr2R	23537148	23537155	412	12	7574	2.0	1.0	1.5	4.8	7584	chr2R	23529571	intron	bw -	chr2R	23533363	intron	bw -	chr2R	23537155	exon	bw -	chr2R_12_23530001	chr2R_23530001	UG5N_1-HE
1250	chr2R	24147079	24147093	chr2R	24154650	24154672	412	4	7575	3.0	3.5	3.2	1.0	7593	chr2R	24147079	intron	Dat +	chr2R	24150876	intron	Dat +	chr2R	24154672	intron	Dat +	chr2R_4_24150001	chr2R_24150001	UG5N_1-HE
1251	chr2R	24177233	24177251	chr2R	24184719	24184737	412	7	7486	6.5	2.0	4.2	1.3	7504	chr2R	24177233	3` UTR	Nop60B +	chr2R	24180985	intron	Nop60B +	chr2R	24184737	3` UTR	Nop60B +	chr2R_7_24180001	chr2R_24180001	UG5N_1-HE
1256	chr2R	24353426	24353461	chr2R	24361789	24361824	roo	4	8363	2.0	0.0	1.0	2.0	8398	chr2R	24353426	intron,intron	bs +,CR44811 -	chr2R	24357625	intron,intron	bs +,CR44811 -	chr2R	24361824	intron,intron	bs +,CR44811 -	chr2R_4_24355001	chr2R_24355001	UG5N_1-HE
1259	chr2R	24647587	24647615	chr2R	24655145	24655173	412	15	7557	3.5	4.5	4.0	3.0	7586	chr2R	24647587	intergenic	not near genes	chr2R	24651380	intergenic	not near genes	chr2R	24655173	intergenic	not near genes	chr2R_15_24650001	chr2R_24650001	UG5N_1-HE
1260	chr2R	24727890	24727905	chr2R	24735399	24735414	mdg1	5	7509	2.0	5.5	3.8	1.0	7524	chr2R	24727890	intron	Mid1 -	chr2R	24731652	intron	Mid1 -	chr2R	24735414	intron	Mid1 -	chr2R_5_24730001	chr2R_24730001	UG5N_1-HE
1261	chr2R	24763610	24763642	chr2R	24765587	24765619	G2	5	1977	0.5	2.0	1.2	2.3	2009	chr2R	24763610	exon	CG3894 +	chr2R	24764614	intron	CG3894 +	chr2R	24765619	exon	CG3894 +	chr2R_5_24760001	chr2R_24760001	UG5N_1-HE
1265	chr2R	25141647	25141683	chr2R	25159338	25159374	roo	19	17689	7.5	5.5	6.5	2.5	17727	chr2R	25141647	intergenic	not near genes	chr2R	25150510	intergenic	not near genes	chr2R	25159374	intergenic	not near genes	chr2R_19_25150001	chr2R_25150001	UG5N_1-HE
1273	chr3L	110211	110242	chr3L	119379	119399	roo	4	9165	4.5	3.5	4.0	0.8	9188	chr3L	110211	intergenic	not near genes	chr3L	114805	intergenic	not near genes	chr3L	119399	intergenic	not near genes	chr3L_4_110001	chr3L_110001	UG5N_1-HE
1276	chr3L	402688	402718	chr3L	409742	409772	297	21	7054	5.5	7.5	6.5	2.8	7084	chr3L	402688	intergenic	not near genes	chr3L	406230	intergenic	not near genes	chr3L	409772	intergenic	not near genes	chr3L_21_405001	chr3L_405001	UG5N_1-HE
1292	chr3L	789913	789947	chr3L	790399	790433	roo	10	486	6.0	4.0	5.0	1.7	520	chr3L	789913	intergenic	not near genes	chr3L	790173	intergenic	not near genes	chr3L	790433	intergenic	not near genes	chr3L_10_790001	chr3L_790001	UG5N_1-HE
1293	chr3L	858008	858032	chr3L	866480	866514	Tirant	6	8480	2.0	4.5	3.2	1.4	8506	chr3L	858008	intergenic	not near genes	chr3L	862261	intergenic	not near genes	chr3L	866514	5` UTR	CG12502 +	chr3L_6_860001	chr3L_860001	UG5N_1-HE
1294	chr3L	925176	925209	chr3L	932603	932636	mdg1	14	7427	2.5	3.0	2.8	3.7	7460	chr3L	925176	intron	Glut1 +	chr3L	928906	intron	Glut1 +	chr3L	932636	intron	Glut1 +	chr3L_14_925001	chr3L_925001	UG5N_1-HE
1296	chr3L	939765	939799	chr3L	940901	940935	jockey	16	1135	4.0	7.0	5.5	2.5	1170	chr3L	939765	intron	Glut1 +	chr3L	940350	intron	Glut1 +	chr3L	940935	intron	Glut1 +	chr3L_16_940001	chr3L_940001	UG5N_1-HE
1302	chr3L	1047367	1047384	chr3L	1055169	1055194	412	7	7800	4.0	3.5	3.8	1.5	7827	chr3L	1047367	intron	bab1 -	chr3L	1051280	intron	bab1 -	chr3L	1055194	intron	bab1 -	chr3L_7_1050001	chr3L_1050001	UG5N_1-HE
1305	chr3L	1154130	1154161	chr3L	1163281	1163312	roo	16	9151	1.5	6.5	4.0	3.2	9182	chr3L	1154130	intron	bab2 -	chr3L	1158721	intron	bab2 -	chr3L	1163312	intron	bab2 -	chr3L_16_1155001	chr3L_1155001	UG5N_1-HE
1306	chr3L	1219595	1219612	chr3L	1227329	1227346	412	6	7734	3.5	3.0	3.2	1.4	7751	chr3L	1219595	intron	mwh +	chr3L	1223470	intron	mwh +	chr3L	1227346	intron	mwh +	chr3L_6_1220001	chr3L_1220001	UG5N_1-HE
1313	chr3L	1424763	1424772	chr3L	1430015	1430025	Rt1a	7	5253	0.0	6.0	3.0	1.8	5262	chr3L	1424763	intron	Ptp61F -	chr3L	1427394	intron	Ptp61F -	chr3L	1430025	intron	Ptp61F -	chr3L_7_1425001	chr3L_1425001	UG5N_1-HE
1315	chr3L	1505994	1506028	chr3L	1513592	1513626	17.6	17	7598	6.5	6.0	6.2	2.4	7632	chr3L	1505994	intron,intron	Psa +,cue -	chr3L	1509810	intron,intron	Psa +,cue -	chr3L	1513626	intron,intron	Psa +,cue -	chr3L_17_1505001	chr3L_1505001	UG5N_1-HE
1320	chr3L	1740859	1740884	chr3L	1741103	1741128	pogo	6	244	1.5	3.0	2.2	1.9	269	chr3L	1740859	intron	Gk +	chr3L	1740994	intron	Gk +	chr3L	1741128	intron	Gk +	chr3L_6_1740001	chr3L_1740001	UG5N_1-HE
1345	chr3L	2447516	2447531	chr3L	2456660	2456688	roo	6	9155	2.0	9.5	5.8	0.9	9172	chr3L	2447516	intron	CG45186 +	chr3L	2452102	intron	CG45186 +	chr3L	2456688	intron	CG45186 +	chr3L_6_2450001	chr3L_2450001	UG5N_1-HE
1356	chr3L	2751452	2751459	chr3L	2755748	2755755	F-element	4	4296	9.0	7.0	8.0	0.4	4303	chr3L	2751452	intron	Mrtf -	chr3L	2753604	intron	Mrtf -	chr3L	2755755	intron	Mrtf -	chr3L_4_2750001	chr3L_2750001	UG5N_1-HE
1362	chr3L	2927836	2927872	chr3L	2936114	2936150	Tirant	23	8277	8.5	9.0	8.8	2.3	8314	chr3L	2927836	intron	Shab +	chr3L	2931993	intron	Shab +	chr3L	2936150	intron	Shab +	chr3L_23_2930001	chr3L_2930001	UG5N_1-HE
1366	chr3L	3040324	3040350	chr3L	3042114	3042140	S-element	7	1790	3.0	0.0	1.5	2.8	1816	chr3L	3040324	3` UTR	CG2162 +	chr3L	3041232	intergenic	not near genes	chr3L	3042140	intergenic	Jafrac2 +	chr3L_7_3040001	chr3L_3040001	UG5N_1-HE
1367	chr3L	3051742	3051750	chr3L	3051985	3051993	pogo	6	243	5.5	1.5	3.5	1.3	251	chr3L	3051742	3` UTR	CG32485 +	chr3L	3051868	intergenic	CG32485 +	chr3L	3051993	intergenic	CG32485 +	chr3L_6_3050001	chr3L_3050001	UG5N_1-HE
1368	chr3L	3061291	3061317	chr3L	3069866	3069901	Tirant	14	8581	5.0	3.0	4.0	2.8	8610	chr3L	3061291	intron	CG32486 -	chr3L	3065596	intron	CG32486 -	chr3L	3069901	intron	CG32486 -	chr3L_14_3065001	chr3L_3065001	UG5N_1-HE
1373	chr3L	3281446	3281471	chr3L	3281942	3281968	Doc	4	497	3.0	8.0	5.5	0.6	522	chr3L	3281446	intron	CG12017 +	chr3L	3281707	intron	CG12017 +	chr3L	3281968	intron	CG12017 +	chr3L_4_3280001	chr3L_3280001	UG5N_1-HE
1378	chr3L	3475073	3475113	chr3L	3475518	3475556	jockey	18	445	3.5	8.5	6.0	2.6	483	chr3L	3475073	intron	CG42324 +	chr3L	3475314	intron	CG42324 +	chr3L	3475556	intron	CG42324 +	chr3L_18_3475001	chr3L_3475001	UG5N_1-HE
1389	chr3L	3601296	3601328	chr3L	3606608	3606640	copia	17	5312	6.5	3.5	5.0	2.8	5344	chr3L	3601296	intron	Eip63E +	chr3L	3603968	intron	Eip63E +	chr3L	3606640	intron	Eip63E +	chr3L_17_3600001	chr3L_3600001	UG5N_1-HE
1396	chr3L	3833736	3833769	chr3L	3833978	3834011	pogo	23	241	8.0	4.5	6.2	3.2	275	chr3L	3833736	intron	enc +	chr3L	3833874	intron	enc +	chr3L	3834011	intron	enc +	chr3L_23_3830001	chr3L_3830001	UG5N_1-HE
1411	chr3L	4328736	4328764	chr3L	4336235	4336262	412	25	7499	4.5	7.5	6.0	3.6	7526	chr3L	4328736	intron	Cip4 -	chr3L	4332499	intron	Cip4 -	chr3L	4336262	intron	Cip4 -	chr3L_25_4330001	chr3L_4330001	UG5N_1-HE
1425	chr3L	4901125	4901155	chr3L	4907316	4907346	diver	10	6191	2.0	1.0	1.5	4.0	6221	chr3L	4901125	intergenic	CG13704 +	chr3L	4904236	intergenic	not near genes	chr3L	4907346	intergenic	not near genes	chr3L_10_4900001	chr3L_4900001	UG5N_1-HE
1429	chr3L	5034156	5034165	chr3L	5043309	5043318	roo	7	9153	11.5	0.5	6.0	1.0	9162	chr3L	5034156	intron	Con -	chr3L	5038737	intron	Con -	chr3L	5043318	intron	Con -	chr3L_7_5035001	chr3L_5035001	UG5N_1-HE
1430	chr3L	5045458	5045485	chr3L	5050240	5050267	Doc	17	4782	7.5	7.0	7.2	2.1	4809	chr3L	5045458	intron	Con -	chr3L	5047862	intron	Con -	chr3L	5050267	intron	Con -	chr3L_17_5045001	chr3L_5045001	UG5N_1-HE
1452	chr3L	5537723	5537749	chr3L	5538063	5538092	jockey	9	342	3.5	1.0	2.2	2.8	369	chr3L	5537723	intergenic	not near genes	chr3L	5537908	intergenic	not near genes	chr3L	5538092	intergenic	CG10625 -	chr3L_9_5535001	chr3L_5535001	UG5N_1-HE
1461	chr3L	5926311	5926349	chr3L	5926502	5926540	BS	8	189	5.0	4.0	4.5	1.5	229	chr3L	5926311	intron	Vap-33B +	chr3L	5926426	intron	Vap-33B +	chr3L	5926540	intron	Vap-33B +	chr3L_8_5925001	chr3L_5925001	UG5N_1-HE
1464	chr3L	6001685	6001717	chr3L	6004386	6004418	jockey	16	2701	7.0	5.0	6.0	2.3	2733	chr3L	6001685	intron	PVRAP +	chr3L	6003052	intron	PVRAP +	chr3L	6004418	intron	PVRAP +	chr3L_16_6000001	chr3L_6000001	UG5N_1-HE
1466	chr3L	6040366	6040393	chr3L	6042723	6042750	Doc	9	2357	0.5	2.0	1.2	4.1	2384	chr3L	6040366	intergenic	Jon65Aiv +	chr3L	6041558	intergenic	not near genes	chr3L	6042750	intergenic	not near genes	chr3L_9_6040001	chr3L_6040001	UG5N_1-HE
1470	chr3L	6220916	6220947	chr3L	6230069	6230100	roo	11	9153	2.5	2.5	2.5	3.1	9184	chr3L	6220916	5` UTR	pncr008:3L +	chr3L	6225508	intergenic	not near genes	chr3L	6230100	intergenic	not near genes	chr3L_11_6225001	chr3L_6225001	UG5N_1-HE
1474	chr3L	6335008	6335042	chr3L	6335480	6335514	297	18	471	4.5	6.5	5.5	2.8	506	chr3L	6335008	intron	CG13300 -	chr3L	6335261	intron	CG13300 -	chr3L	6335514	intron	CG13300 -	chr3L_18_6335001	chr3L_6335001	UG5N_1-HE
1475	chr3L	6405656	6405691	chr3L	6432121	6432156	roo	11	26465	5.0	9.0	7.0	1.4	26500	chr3L	6405656	intron	CG42747 +	chr3L	6418906	intron	CG42747 +	chr3L	6432156	intron	CG42747 +	chr3L_11_6415001	chr3L_6415001	UG5N_1-HE
1478	chr3L	6781121	6781152	chr3L	6783135	6783145	Doc	24	2013	9.0	7.0	8.0	2.7	2024	chr3L	6781121	intergenic	not near genes	chr3L	6782133	intergenic	not near genes	chr3L	6783145	intergenic	not near genes	chr3L_24_6780001	chr3L_6780001	UG5N_1-HE
1479	chr3L	6855941	6855952	chr3L	6860721	6860739	Doc	6	4784	7.0	10.5	8.8	0.6	4798	chr3L	6855941	intergenic	not near genes	chr3L	6858340	intergenic	not near genes	chr3L	6860739	intergenic	not near genes	chr3L_6_6855001	chr3L_6855001	UG5N_1-HE
1480	chr3L	6887515	6887547	chr3L	6895008	6895040	roo	14	7492	5.0	7.0	6.0	2.0	7525	chr3L	6887515	intergenic	not near genes	chr3L	6891278	intergenic	not near genes	chr3L	6895040	intergenic	not near genes	chr3L_14_6890001	chr3L_6890001	UG5N_1-HE
1484	chr3L	6994884	6994917	chr3L	6995496	6995529	BS	18	612	0.0	3.0	1.5	7.2	645	chr3L	6994884	intergenic	bin +	chr3L	6995206	intergenic	not near genes	chr3L	6995529	intergenic	not near genes	chr3L_18_6995001	chr3L_6995001	UG5N_1-HE
1496	chr3L	7129954	7129983	chr3L	7130147	7130176	BS	7	193	0.0	3.5	1.8	2.5	222	chr3L	7129954	intergenic	CG15829 +	chr3L	7130065	intergenic	CG15829 +	chr3L	7130176	intergenic	not near genes	chr3L_7_7130001	chr3L_7130001	UG5N_1-HE
1505	chr3L	7377316	7377348	chr3L	7380422	7380454	297	8	3106	3.0	6.0	4.5	1.5	3138	chr3L	7377316	intron	SMSr -	chr3L	7378885	intron	SMSr -	chr3L	7380454	intron	SMSr -	chr3L_8_7375001	chr3L_7375001	UG5N_1-HE
1509	chr3L	7498724	7498747	chr3L	7503531	7503554	F-element	15	4807	5.0	2.0	3.5	3.3	4830	chr3L	7498724	5` UTR	CG8539 -	chr3L	7501139	intergenic	not near genes	chr3L	7503554	intergenic	not near genes	chr3L_15_7500001	chr3L_7500001	UG5N_1-HE
1520	chr3L	7793711	7793743	chr3L	7800764	7800796	297	21	7053	8.0	6.0	7.0	2.6	7085	chr3L	7793711	intron	CG32369 -	chr3L	7797254	intron	CG32369 -	chr3L	7800796	intron	CG32369 -	chr3L_21_7795001	chr3L_7795001	UG5N_1-HE
1524	chr3L	7886510	7886546	chr3L	7889029	7889065	Stalker4	16	2519	5.5	4.0	4.8	2.8	2555	chr3L	7886510	intron	CG32365 +	chr3L	7887788	intron	CG32365 +	chr3L	7889065	intron	CG32365 +	chr3L_16_7885001	chr3L_7885001	UG5N_1-HE
1526	chr3L	7916830	7916860	chr3L	7926002	7926032	roo	8	9172	5.5	4.5	5.0	1.3	9202	chr3L	7916830	3` UTR	syd -	chr3L	7921431	intron	syd -	chr3L	7926032	3` UTR	syd -	chr3L_8_7920001	chr3L_7920001	UG5N_1-HE
1528	chr3L	7985373	7985392	chr3L	7987703	7987722	NOF	4	2330	4.5	6.5	5.5	0.6	2349	chr3L	7985373	intron	nmo +	chr3L	7986548	intron	nmo +	chr3L	7987722	intron	nmo +	chr3L_4_7985001	chr3L_7985001	UG5N_1-HE
1531	chr3L	8019710	8019737	chr3L	8024118	8024155	NOF	7	4416	2.5	5.0	3.8	1.5	4445	chr3L	8019710	intron	nmo +	chr3L	8021932	intron	nmo +	chr3L	8024155	intron	nmo +	chr3L_7_8020001	chr3L_8020001	UG5N_1-HE
1538	chr3L	8233591	8233594	chr3L	8238854	8238857	Rt1a	4	5262	4.5	17.0	10.8	0.3	5266	chr3L	8233591	intron	CG7213 -	chr3L	8236224	intron	CG7213 -	chr3L	8238857	intron,intron	CG7213 -,Dscam4 +	chr3L_4_8235001	chr3L_8235001	UG5N_1-HE
1546	chr3L	8498315	8498329	chr3L	8505780	8505797	blood	4	7467	2.5	3.0	2.8	1.1	7482	chr3L	8498315	intron	CG43163 -	chr3L	8502056	intron	CG43163 -	chr3L	8505797	intron	CG43163 -	chr3L_4_8500001	chr3L_8500001	UG5N_1-HE
1555	chr3L	8791275	8791290	chr3L	8796696	8796711	I-element	10	5421	10.0	0.0	5.0	1.7	5436	chr3L	8791275	exon	Fhos +	chr3L	8793993	intron	Fhos +	chr3L	8796711	intron	Fhos +	chr3L_10_8790001	chr3L_8790001	UG5N_1-HE
1565	chr3L	9076926	9076942	chr3L	9084486	9084503	412	13	7560	8.0	5.0	6.5	1.7	7577	chr3L	9076926	exon	Tequila +	chr3L	9080714	intron	Tequila +	chr3L	9084503	exon	Tequila +	chr3L_13_9080001	chr3L_9080001	UG5N_1-HE
1566	chr3L	9076948	9076953	chr3L	9084485	9084511	412	5	7556	6.5	5.0	5.8	0.7	7563	chr3L	9076948	exon	Tequila +	chr3L	9080730	intron	Tequila +	chr3L	9084511	exon	Tequila +	chr3L_5_9080001	chr3L_9080001	UG5N_1-HE
1568	chr3L	9130555	9130578	chr3L	9134317	9134340	412	13	3762	8.5	7.0	7.8	1.5	3785	chr3L	9130555	intergenic	bol -	chr3L	9132448	intergenic	not near genes	chr3L	9134340	intergenic	Dhpr +	chr3L_13_9130001	chr3L_9130001	UG5N_1-HE
1569	chr3L	9164692	9164730	chr3L	9166160	9166198	hobo	25	1468	6.0	10.5	8.2	2.7	1506	chr3L	9164692	intron	Rdl -	chr3L	9165445	intron	Rdl -	chr3L	9166198	intron	Rdl -	chr3L_25_9165001	chr3L_9165001	UG5N_1-HE
1571	chr3L	9219243	9219275	chr3L	9219916	9219947	jockey	20	673	7.5	10.0	8.8	2.0	704	chr3L	9219243	intergenic	not near genes	chr3L	9219595	intergenic	not near genes	chr3L	9219947	intergenic	not near genes	chr3L_20_9215001	chr3L_9215001	UG5N_1-HE
1574	chr3L	9270614	9270650	chr3L	9278370	9278406	roo	9	7754	5.0	8.5	6.8	1.2	7792	chr3L	9270614	intron	GluRIB +	chr3L	9274510	intron	GluRIB +	chr3L	9278406	exon	GluRIB +	chr3L_9_9270001	chr3L_9270001	UG5N_1-HE
1581	chr3L	9443516	9443531	chr3L	9445308	9445323	S-element	6	1792	7.0	6.0	6.5	0.8	1807	chr3L	9443516	intron	CG33926 +	chr3L	9444420	intron	CG33926 +	chr3L	9445323	intron	CG33926 +	chr3L_6_9440001	chr3L_9440001	UG5N_1-HE
1582	chr3L	9501698	9501727	chr3L	9502185	9502214	roo	5	487	1.5	2.0	1.8	1.8	516	chr3L	9501698	intron	path -	chr3L	9501956	intron	path -	chr3L	9502214	intron	path -	chr3L_5_9500001	chr3L_9500001	UG5N_1-HE
1584	chr3L	9533750	9533781	chr3L	9541311	9541342	412	12	7558	6.5	6.5	6.5	1.6	7592	chr3L	9533750	intergenic	not near genes	chr3L	9537546	intergenic	not near genes	chr3L	9541342	intergenic	not near genes	chr3L_12_9535001	chr3L_9535001	UG5N_1-HE
1585	chr3L	9571899	9571933	chr3L	9572248	9572282	jockey	22	349	4.0	6.0	5.0	3.7	383	chr3L	9571899	intron	CG42673 +	chr3L	9572090	intron	CG42673 +	chr3L	9572282	intron	CG42673 +	chr3L_22_9570001	chr3L_9570001	UG5N_1-HE
1586	chr3L	9575905	9575942	chr3L	9580984	9581012	jockey	15	5078	9.0	3.0	6.0	2.1	5107	chr3L	9575905	intron	CG42673 +	chr3L	9578458	intron	CG42673 +	chr3L	9581012	intron	CG42673 +	chr3L_15_9575001	chr3L_9575001	UG5N_1-HE
1596	chr3L	9929664	9929699	chr3L	9938444	9938479	roo	23	8779	10.0	9.5	9.8	2.1	8815	chr3L	9929664	intron	CG34356 +	chr3L	9934072	intron	CG34356 +	chr3L	9938479	intron	CG34356 +	chr3L_23_9930001	chr3L_9930001	UG5N_1-HE
1613	chr3L	10414940	10414974	chr3L	10417313	10417347	Doc	19	2373	6.5	5.0	5.8	2.8	2407	chr3L	10414940	intergenic	CG12362 +	chr3L	10416144	intergenic	not near genes	chr3L	10417347	intergenic	not near genes	chr3L_19_10415001	chr3L_10415001	UG5N_1-HE
1635	chr3L	11087059	11087088	chr3L	11088849	11088878	S-element	11	1790	4.0	3.0	3.5	2.4	1819	chr3L	11087059	intron	JIL-1 -	chr3L	11087968	intron	JIL-1 -	chr3L	11088878	intron	JIL-1 -	chr3L_11_11085001	chr3L_11085001	UG5N_1-HE
1636	chr3L	11105287	11105309	chr3L	11106999	11107021	X-element	10	1712	2.0	1.5	1.8	3.6	1734	chr3L	11105287	intergenic	not near genes	chr3L	11106154	intergenic	not near genes	chr3L	11107021	3` UTR	CG32073 -	chr3L_10_11105001	chr3L_11105001	UG5N_1-HE
1640	chr3L	11264462	11264494	chr3L	11271415	11271447	17.6	8	6953	2.5	3.0	2.8	2.1	6985	chr3L	11264462	intergenic	not near genes	chr3L	11267954	intergenic	not near genes	chr3L	11271447	intergenic	not near genes	chr3L_8_11265001	chr3L_11265001	UG5N_1-HE
1641	chr3L	11277457	11277482	chr3L	11278453	11278478	Rt1a	5	996	3.5	0.5	2.0	1.7	1021	chr3L	11277457	intergenic	not near genes	chr3L	11277968	intergenic	not near genes	chr3L	11278478	intergenic	not near genes	chr3L_5_11275001	chr3L_11275001	UG5N_1-HE
1643	chr3L	11329689	11329726	chr3L	11332895	11332932	jockey	17	3206	7.0	4.5	5.8	2.5	3243	chr3L	11329689	intergenic	not near genes	chr3L	11331310	intergenic	not near genes	chr3L	11332932	intergenic	not near genes	chr3L_17_11330001	chr3L_11330001	UG5N_1-HE
1656	chr3L	11723080	11723115	chr3L	11727876	11727911	Doc	11	4796	5.5	4.0	4.8	1.9	4831	chr3L	11723080	3` UTR	Bmcp +	chr3L	11725496	intron	Bmcp +	chr3L	11727911	3` UTR	Bmcp +	chr3L_11_11725001	chr3L_11725001	UG5N_1-HE
1664	chr3L	11864551	11864584	chr3L	11865847	11865880	pogo	21	1296	4.0	10.0	7.0	2.6	1329	chr3L	11864551	intron	CG44837 -	chr3L	11865216	intron	CG44837 -	chr3L	11865880	intron	CG44837 -	chr3L_21_11865001	chr3L_11865001	UG5N_1-HE
1696	chr3L	12874922	12874962	chr3L	12877215	12877255	jockey	17	2292	3.5	5.0	4.2	3.3	2333	chr3L	12874922	intergenic	not near genes	chr3L	12876088	intergenic	not near genes	chr3L	12877255	intergenic	not near genes	chr3L_17_12875001	chr3L_12875001	UG5N_1-HE
1699	chr3L	12919273	12919304	chr3L	12924747	12924778	Rt1c	25	5471	4.5	8.0	6.2	3.5	5505	chr3L	12919273	intergenic	not near genes	chr3L	12922026	intergenic	not near genes	chr3L	12924778	intergenic	not near genes	chr3L_25_12920001	chr3L_12920001	UG5N_1-HE
1702	chr3L	12957786	12957818	chr3L	12962269	12962289	copia	18	4482	5.5	9.5	7.5	2.1	4503	chr3L	12957786	intergenic	not near genes	chr3L	12960038	intergenic	not near genes	chr3L	12962289	intergenic	not near genes	chr3L_18_12960001	chr3L_12960001	UG5N_1-HE
1723	chr3L	13525155	13525190	chr3L	13532952	13532987	roo	16	7797	4.0	7.0	5.5	2.5	7832	chr3L	13525155	intergenic	not near genes	chr3L	13529071	intergenic	not near genes	chr3L	13532987	intergenic	not near genes	chr3L_16_13525001	chr3L_13525001	UG5N_1-HE
1732	chr3L	13804545	13804577	chr3L	13822832	13822864	roo	25	18287	7.0	11.0	9.0	2.5	18319	chr3L	13804545	intergenic	not near genes	chr3L	13813704	intergenic	not near genes	chr3L	13822864	intergenic	not near genes	chr3L_25_13810001	chr3L_13810001	UG5N_1-HE
1744	chr3L	14245568	14245594	chr3L	14245663	14245689	1360	10	95	8.0	4.0	6.0	1.4	121	chr3L	14245568	3` UTR	CR44561 -	chr3L	14245628	3` UTR	CR44561 -	chr3L	14245689	3` UTR	CR44561 -	chr3L_10_14245001	chr3L_14245001	UG5N_1-HE
1745	chr3L	14267364	14267398	chr3L	14271805	14271839	F-element	15	4441	6.0	4.5	5.2	2.4	4475	chr3L	14267364	intergenic	not near genes	chr3L	14269602	intergenic	not near genes	chr3L	14271839	intergenic	not near genes	chr3L_15_14265001	chr3L_14265001	UG5N_1-HE
1747	chr3L	14295983	14296016	chr3L	14296470	14296512	roo	13	493	9.0	0.0	4.5	2.4	529	chr3L	14295983	intron	fz +	chr3L	14296248	intron	fz +	chr3L	14296512	intron	fz +	chr3L_13_14295001	chr3L_14295001	UG5N_1-HE
1748	chr3L	14312024	14312060	chr3L	14316833	14316859	X-element	25	4811	5.5	5.5	5.5	3.8	4835	chr3L	14312024	exon	fz +	chr3L	14314442	intron	fz +	chr3L	14316859	intron	fz +	chr3L_25_14310001	chr3L_14310001	UG5N_1-HE
1755	chr3L	14468445	14468476	chr3L	14473652	14473683	copia	20	5207	5.5	12.5	9.0	2.0	5238	chr3L	14468445	intron	bbg -	chr3L	14471064	intron	bbg -	chr3L	14473683	intron	bbg -	chr3L_20_14470001	chr3L_14470001	UG5N_1-HE
1758	chr3L	14524327	14524344	chr3L	14529080	14529107	F-element	8	4762	5.0	4.0	4.5	1.5	4780	chr3L	14524327	intron	bbg -	chr3L	14526717	intron	bbg -	chr3L	14529107	intron	bbg -	chr3L_8_14525001	chr3L_14525001	UG5N_1-HE
1761	chr3L	14721183	14721204	chr3L	14723027	14723048	Rt1c	7	1844	7.5	7.5	7.5	0.8	1865	chr3L	14721183	intron	ome +	chr3L	14722116	intron	ome +	chr3L	14723048	intron	ome +	chr3L_7_14720001	chr3L_14720001	UG5N_1-HE
1762	chr3L	14725603	14725626	chr3L	14728598	14728609	Doc	9	2994	3.0	8.0	5.5	1.4	3006	chr3L	14725603	intron	ome +	chr3L	14727106	intron	ome +	chr3L	14728609	intron	ome +	chr3L_9_14725001	chr3L_14725001	UG5N_1-HE
1771	chr3L	14954379	14954386	chr3L	14956049	14956056	transib2	4	1670	8.5	5.0	6.8	0.5	1677	chr3L	14954379	intergenic	not near genes	chr3L	14955218	intergenic	not near genes	chr3L	14956056	intergenic	not near genes	chr3L_4_14955001	chr3L_14955001	UG5N_1-HE
1772	chr3L	14954387	14954398	chr3L	14956048	14956068	transib2	5	1668	6.5	5.0	5.8	0.7	1681	chr3L	14954387	intergenic	not near genes	chr3L	14955228	intergenic	not near genes	chr3L	14956068	intergenic	not near genes	chr3L_5_14955001	chr3L_14955001	UG5N_1-HE
1775	chr3L	15085054	15085085	chr3L	15086221	15086250	1360	7	1166	4.0	2.0	3.0	1.8	1196	chr3L	15085054	intron	cp309 -	chr3L	15085652	intron	cp309 -	chr3L	15086250	intron	cp309 -	chr3L_7_15085001	chr3L_15085001	UG5N_1-HE
1783	chr3L	15295767	15295801	chr3L	15298610	15298645	gypsy5	21	2844	8.5	6.5	7.5	2.5	2878	chr3L	15295767	intergenic	not near genes	chr3L	15297206	intergenic	not near genes	chr3L	15298645	intergenic	Best4 +	chr3L_21_15295001	chr3L_15295001	UG5N_1-HE
1788	chr3L	15423759	15423780	chr3L	15426604	15426625	opus	14	2845	8.5	4.5	6.5	1.9	2866	chr3L	15423759	intergenic	not near genes	chr3L	15425192	intergenic	not near genes	chr3L	15426625	intergenic	not near genes	chr3L_14_15425001	chr3L_15425001	UG5N_1-HE
1793	chr3L	15554918	15554952	chr3L	15556706	15556740	S-element	12	1788	3.0	3.5	3.2	2.9	1822	chr3L	15554918	intron	AGO2 +	chr3L	15555829	intron	AGO2 +	chr3L	15556740	intron	AGO2 +	chr3L_12_15555001	chr3L_15555001	UG5N_1-HE
1813	chr3L	15899221	15899261	chr3L	15899789	15899829	jockey	8	566	2.5	4.5	3.5	1.8	608	chr3L	15899221	intergenic	pHCl -	chr3L	15899525	intergenic	pHCl -	chr3L	15899829	intergenic	sff -	chr3L_8_15895001	chr3L_15895001	UG5N_1-HE
1814	chr3L	15929223	15929230	chr3L	15938371	15938378	roo	4	9148	0.0	5.5	2.8	1.1	9155	chr3L	15929223	intron	Pka-C3 -	chr3L	15933800	intron	Pka-C3 -	chr3L	15938378	intron	Pka-C3 -	chr3L_4_15930001	chr3L_15930001	UG5N_1-HE
1818	chr3L	16184103	16184141	chr3L	16188923	16188961	X-element	11	4820	0.0	7.0	3.5	2.4	4858	chr3L	16184103	intergenic	not near genes	chr3L	16186532	intergenic	not near genes	chr3L	16188961	intergenic	not near genes	chr3L_11_16185001	chr3L_16185001	UG5N_1-HE
1826	chr3L	16443846	16443879	chr3L	16446187	16446220	Doc	28	2341	6.0	5.5	5.8	4.1	2374	chr3L	16443846	intron,intron	CG33158 +,dsx-c73A -	chr3L	16445033	intron,intron	CG33158 +,dsx-c73A -	chr3L	16446220	intron,intron	CG33158 +,dsx-c73A -	chr3L_28_16445001	chr3L_16445001	UG5N_1-HE
1830	chr3L	16493974	16494012	chr3L	16494492	16494530	jockey	27	517	11.5	9.0	10.2	2.4	556	chr3L	16493974	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L	16494252	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L	16494530	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L_27_16490001	chr3L_16490001	UG5N_1-HE
1837	chr3L	16616508	16616538	chr3L	16621837	16621867	297	9	5329	3.5	3.0	3.2	2.1	5359	chr3L	16616508	3` UTR	Abl -	chr3L	16619188	3` UTR	Abl -	chr3L	16621867	3` UTR	Abl -	chr3L_9_16615001	chr3L_16615001	UG5N_1-HE
1840	chr3L	16684016	16684052	chr3L	16689238	16689274	copia	20	5222	7.5	10.5	9.0	2.0	5258	chr3L	16684016	intron,intron	Lasp -,CG43954 -	chr3L	16686645	intron,intron	Lasp -,CG43954 -	chr3L	16689274	intron,intron,5` UTR	Lasp -,CG43954 -,CR45179 +	chr3L_20_16685001	chr3L_16685001	UG5N_1-HE
1857	chr3L	16945727	16945758	chr3L	16954881	16954912	roo	17	9154	10.0	10.0	10.0	1.5	9185	chr3L	16945727	exon	Obp73a +	chr3L	16950320	intergenic	not near genes	chr3L	16954912	5` UTR	Nc73EF +	chr3L_17_16950001	chr3L_16950001	UG5N_1-HE
1860	chr3L	17085002	17085038	chr3L	17094152	17094188	roo	29	9150	10.0	9.0	9.5	2.8	9186	chr3L	17085002	intron	Rbp6 -	chr3L	17089595	intron	Rbp6 -	chr3L	17094188	intron	Rbp6 -	chr3L_29_17085001	chr3L_17085001	UG5N_1-HE
1873	chr3L	17516980	17517000	chr3L	17524539	17524559	412	6	7559	9.0	2.0	5.5	0.9	7579	chr3L	17516980	intron	CG7564 +	chr3L	17520770	intron	CG7564 +	chr3L	17524559	3` UTR	CG7564 +	chr3L_6_17520001	chr3L_17520001	UG5N_1-HE
1882	chr3L	17730851	17730884	chr3L	17738182	17738215	mdg1	11	7331	2.5	3.0	2.8	2.9	7364	chr3L	17730851	intron	Ccn +	chr3L	17734533	intron	Ccn +	chr3L	17738215	intron	Ccn +	chr3L_11_17730001	chr3L_17730001	UG5N_1-HE
1884	chr3L	17799809	17799842	chr3L	17801597	17801630	S-element	15	1787	3.0	3.5	3.2	3.6	1821	chr3L	17799809	intron	NUCB1 -	chr3L	17800720	intron	NUCB1 -	chr3L	17801630	intron	NUCB1 -	chr3L_15_17800001	chr3L_17800001	UG5N_1-HE
1887	chr3L	17918373	17918405	chr3L	17921177	17921208	opus	9	2803	3.5	1.5	2.5	2.6	2835	chr3L	17918373	intergenic	not near genes	chr3L	17919790	intergenic	not near genes	chr3L	17921208	intergenic	not near genes	chr3L_9_17915001	chr3L_17915001	UG5N_1-HE
1894	chr3L	18047706	18047738	chr3L	18056764	18056796	roo	10	9058	3.0	1.0	2.0	3.3	9090	chr3L	18047706	intron	Eip75B -	chr3L	18052251	intron	Eip75B -	chr3L	18056796	intron	Eip75B -	chr3L_10_18050001	chr3L_18050001	UG5N_1-HE
1920	chr3L	18506131	18506163	chr3L	18509592	18509627	F-element	24	3464	5.0	5.5	5.2	3.9	3496	chr3L	18506131	intergenic	not near genes	chr3L	18507879	intergenic	not near genes	chr3L	18509627	intergenic	not near genes	chr3L_24_18505001	chr3L_18505001	UG5N_1-HE
1921	chr3L	18514903	18514936	chr3L	18520095	18520128	BS	19	5192	4.0	6.5	5.2	3.1	5225	chr3L	18514903	intergenic	not near genes	chr3L	18517516	intergenic	not near genes	chr3L	18520128	intergenic	not near genes	chr3L_19_18515001	chr3L_18515001	UG5N_1-HE
1922	chr3L	18528639	18528655	chr3L	18537823	18537840	roo	22	9185	5.0	7.5	6.2	3.1	9201	chr3L	18528639	intergenic	not near genes	chr3L	18533240	intergenic	not near genes	chr3L	18537840	intergenic	not near genes	chr3L_22_18530001	chr3L_18530001	UG5N_1-HE
1927	chr3L	18593946	18593969	chr3L	18595927	18595950	Doc	12	1981	8.0	0.0	4.0	2.4	2004	chr3L	18593946	intergenic	term -	chr3L	18594948	intergenic	not near genes	chr3L	18595950	intergenic	CR45389 +	chr3L_12_18590001	chr3L_18590001	UG5N_1-HE
1932	chr3L	18710757	18710791	chr3L	18718710	18718744	Stalker2	13	7953	5.5	5.0	5.2	2.1	7987	chr3L	18710757	intergenic	not near genes	chr3L	18714750	intergenic	not near genes	chr3L	18718744	intergenic	not near genes	chr3L_13_18710001	chr3L_18710001	UG5N_1-HE
1934	chr3L	18772409	18772434	chr3L	18781090	18781116	roo	20	8682	14.5	5.0	9.8	1.9	8707	chr3L	18772409	intron	ftz-f1 -	chr3L	18776762	intron	ftz-f1 -	chr3L	18781116	intron	ftz-f1 -	chr3L_20_18775001	chr3L_18775001	UG5N_1-HE
1938	chr3L	18833798	18833812	chr3L	18834963	18834971	1360	5	1164	1.0	9.5	5.2	0.8	1173	chr3L	18833798	intron	Indy -	chr3L	18834384	intron	Indy -	chr3L	18834971	intron	Indy -	chr3L_5_18830001	chr3L_18830001	UG5N_1-HE
1944	chr3L	19008844	19008878	chr3L	19009182	19009201	jockey	9	335	2.0	8.5	5.2	1.5	357	chr3L	19008844	intron	nkd -	chr3L	19009022	intron	nkd -	chr3L	19009201	intron	nkd -	chr3L_9_19005001	chr3L_19005001	UG5N_1-HE
1948	chr3L	19115636	19115664	chr3L	19115815	19115843	BS	11	178	6.5	3.5	5.0	1.8	207	chr3L	19115636	intron	CG14082 -	chr3L	19115740	intron	CG14082 -	chr3L	19115843	intron	CG14082 -	chr3L_11_19115001	chr3L_19115001	UG5N_1-HE
1949	chr3L	19117041	19117048	chr3L	19124489	19124496	mdg1	4	7448	7.5	3.0	5.2	0.6	7455	chr3L	19117041	intron	CG14082 -	chr3L	19120768	intron	CG14082 -	chr3L	19124496	intron	CG14082 -	chr3L_4_19120001	chr3L_19120001	UG5N_1-HE
1950	chr3L	19117051	19117076	chr3L	19124487	19124524	mdg1	9	7445	3.0	3.0	3.0	2.2	7473	chr3L	19117051	intron	CG14082 -	chr3L	19120788	intron	CG14082 -	chr3L	19124524	intron	CG14082 -	chr3L_9_19120001	chr3L_19120001	UG5N_1-HE
1955	chr3L	19208057	19208092	chr3L	19209432	19209451	Doc	22	1373	7.0	6.0	6.5	2.9	1394	chr3L	19208057	intron	fz2 -	chr3L	19208754	intron	fz2 -	chr3L	19209451	intron	fz2 -	chr3L_22_19205001	chr3L_19205001	UG5N_1-HE
1965	chr3L	19820301	19820319	chr3L	19827851	19827869	412	5	7550	4.5	3.0	3.8	1.0	7568	chr3L	19820301	intron	Deaf1 +	chr3L	19824085	intron	Deaf1 +	chr3L	19827869	intron	Deaf1 +	chr3L_5_19820001	chr3L_19820001	UG5N_1-HE
1967	chr3L	19848510	19848524	chr3L	19857701	19857715	roo	5	9191	3.5	3.5	3.5	1.1	9205	chr3L	19848510	intron	Papss +	chr3L	19853112	intron	Papss +	chr3L	19857715	intron	Papss +	chr3L_5_19850001	chr3L_19850001	UG5N_1-HE
1968	chr3L	19861821	19861852	chr3L	19863610	19863641	S-element	7	1789	1.5	1.0	1.2	3.2	1820	chr3L	19861821	5` UTR	CR45433 +	chr3L	19862731	intergenic	not near genes	chr3L	19863641	intergenic	not near genes	chr3L_7_19860001	chr3L_19860001	UG5N_1-HE
1974	chr3L	20113656	20113678	chr3L	20122913	20122936	roo	7	9258	4.0	3.0	3.5	1.6	9280	chr3L	20113656	intergenic	not near genes	chr3L	20118296	intergenic	not near genes	chr3L	20122936	intergenic	not near genes	chr3L_7_20115001	chr3L_20115001	UG5N_1-HE
1981	chr3L	20257332	20257359	chr3L	20258453	20258480	pogo	13	1121	5.0	7.0	6.0	1.9	1148	chr3L	20257332	intron	rdgC +	chr3L	20257906	intron	rdgC +	chr3L	20258480	intron	rdgC +	chr3L_13_20255001	chr3L_20255001	UG5N_1-HE
1986	chr3L	20476752	20476780	chr3L	20484352	20484380	springer	5	7600	5.5	4.5	5.0	0.8	7628	chr3L	20476752	3` UTR	isoQC +	chr3L	20480566	intergenic	not near genes	chr3L	20484380	3` UTR	ZnT77C -	chr3L_5_20480001	chr3L_20480001	UG5N_1-HE
1987	chr3L	20499689	20499693	chr3L	20504057	20504061	INE-1	4	4368	14.5	14.5	14.5	0.3	4372	chr3L	20499689	intron	CG32425 +	chr3L	20501875	intron	CG32425 +	chr3L	20504061	intron	CG32425 +	chr3L_4_20500001	chr3L_20500001	UG5N_1-HE
1993	chr3L	20590065	20590095	chr3L	20590603	20590635	412	18	538	7.0	3.0	5.0	3.0	570	chr3L	20590065	intergenic	not near genes	chr3L	20590350	intergenic	not near genes	chr3L	20590635	intergenic	not near genes	chr3L_18_20590001	chr3L_20590001	UG5N_1-HE
2000	chr3L	20821292	20821307	chr3L	20824762	20824777	NOF	4	3470	3.0	8.5	5.8	0.6	3485	chr3L	20821292	intron	Pka-R1 +	chr3L	20823034	intron	Pka-R1 +	chr3L	20824777	intron	Pka-R1 +	chr3L_4_20820001	chr3L_20820001	UG5N_1-HE
2002	chr3L	12163713	12163714	chr3L	20885884	20885885	BS	4	8722171	31.0	11.0	21.0	0.2	8722172	chr3L	12163713	5` UTR	CG9760 -	chr3L	16524799	intron	CG43373 -	chr3L	20885885	intergenic	not near genes	chr3L_4_16520001	chr3L_16520001	UG5N_1-HE
2006	chr3L	21014913	21014947	chr3L	21023394	21023422	Tirant	25	8480	7.0	7.5	7.2	3.0	8509	chr3L	21014913	intron	skd -	chr3L	21019168	intron	skd -	chr3L	21023422	intron	skd -	chr3L_25_21015001	chr3L_21015001	UG5N_1-HE
2009	chr3L	21151861	21151890	chr3L	21156946	21156975	flea	23	5084	3.0	3.0	3.0	5.8	5114	chr3L	21151861	intron	Ac78C -	chr3L	21154418	intron	Ac78C -	chr3L	21156975	intron	Ac78C -	chr3L_23_21150001	chr3L_21150001	UG5N_1-HE
2013	chr3L	21243745	21243767	chr3L	21251309	21251329	412	4	7564	3.0	5.5	4.2	0.8	7584	chr3L	21243745	intron	Eip78C +	chr3L	21247537	intron	Eip78C +	chr3L	21251329	intron	Eip78C +	chr3L_4_21245001	chr3L_21245001	UG5N_1-HE
2014	chr3L	21306144	21306180	chr3L	21315304	21315340	roo	17	9160	6.0	6.0	6.0	2.4	9196	chr3L	21306144	3` UTR,3` UTR	CG7632 +,Pc -	chr3L	21310742	intron	Pc -	chr3L	21315340	3` UTR	Pc -	chr3L_17_21310001	chr3L_21310001	UG5N_1-HE
2015	chr3L	21372719	21372751	chr3L	21379228	21379260	McClintock	11	6509	6.0	3.5	4.8	1.9	6541	chr3L	21372719	intergenic	not near genes	chr3L	21375990	intergenic	not near genes	chr3L	21379260	intergenic	not near genes	chr3L_11_21375001	chr3L_21375001	UG5N_1-HE
2017	chr3L	21498834	21498856	chr3L	21500471	21500493	1360	13	1636	13.0	11.5	12.2	1.0	1659	chr3L	21498834	intron	Glg1 -	chr3L	21499664	intron	Glg1 -	chr3L	21500493	intron	Glg1 -	chr3L_13_21495001	chr3L_21495001	UG5N_1-HE
2021	chr3L	21749318	21749330	chr3L	21754479	21754480	Doc	9	5160	1.5	7.5	4.5	1.6	5162	chr3L	21749318	intron	Syn1 -	chr3L	21751899	intron	Syn1 -	chr3L	21754480	intron	Syn1 -	chr3L_9_21750001	chr3L_21750001	UG5N_1-HE
2022	chr3L	21749334	21749345	chr3L	21754475	21754502	Doc	7	5156	1.0	7.0	4.0	1.4	5168	chr3L	21749334	intron	Syn1 -	chr3L	21751918	intron	Syn1 -	chr3L	21754502	intron	Syn1 -	chr3L_7_21750001	chr3L_21750001	UG5N_1-HE
2034	chr3L	22099673	22099699	chr3L	22105860	22105886	3S18	10	6187	3.0	4.5	3.8	2.1	6213	chr3L	22099673	intergenic	not near genes	chr3L	22102780	intergenic	not near genes	chr3L	22105886	intergenic	not near genes	chr3L_10_22100001	chr3L_22100001	UG5N_1-HE
2043	chr3L	22555768	22555803	chr3L	22563239	22563274	blood	11	7468	5.0	3.5	4.2	2.1	7506	chr3L	22555768	intergenic	not near genes	chr3L	22559521	intergenic	not near genes	chr3L	22563274	intergenic	not near genes	chr3L_11_22555001	chr3L_22555001	UG5N_1-HE
2045	chr3L	22577622	22577648	chr3L	22582405	22582437	Doc	12	4788	3.0	5.0	4.0	2.4	4815	chr3L	22577622	intergenic	not near genes	chr3L	22580030	intergenic	not near genes	chr3L	22582437	3` UTR	CG14459 -	chr3L_12_22580001	chr3L_22580001	UG5N_1-HE
2046	chr3L	22617191	22617223	chr3L	22624644	22624676	blood	12	7453	4.5	4.5	4.5	2.2	7485	chr3L	22617191	intron	CG14459 -	chr3L	22620934	intron	CG14459 -	chr3L	22624676	intron	CG14459 -	chr3L_12_22620001	chr3L_22620001	UG5N_1-HE
2050	chr3L	22761391	22761400	chr3L	22766818	22766835	Ivk	10	5434	1.0	5.0	3.0	2.5	5444	chr3L	22761391	intron	SPoCk +	chr3L	22764113	intron	SPoCk +	chr3L	22766835	intron	SPoCk +	chr3L_10_22760001	chr3L_22760001	UG5N_1-HE
2051	chr3L	22761403	22761418	chr3L	22766817	22766853	Ivk	11	5432	1.0	4.5	2.8	2.9	5450	chr3L	22761403	intron	SPoCk +	chr3L	22764128	intron	SPoCk +	chr3L	22766853	intron	SPoCk +	chr3L_11_22760001	chr3L_22760001	UG5N_1-HE
2053	chr3L	22865982	22866013	chr3L	22867113	22867147	Doc	6	1132	2.0	2.5	2.2	1.9	1165	chr3L	22865982	intron	CG33170 +	chr3L	22866564	intron	CG33170 +	chr3L	22867147	intron	CG33170 +	chr3L_6_22865001	chr3L_22865001	UG5N_1-HE
2058	chr3L	22989863	22989893	chr3L	22996838	22996868	297	8	6975	7.0	7.0	7.0	1.0	7005	chr3L	22989863	intergenic	not near genes	chr3L	22993366	intergenic	not near genes	chr3L	22996868	intergenic	not near genes	chr3L_8_22990001	chr3L_22990001	UG5N_1-HE
2059	chr3L	23042226	23042258	chr3L	23048980	23049007	gypsy6	15	6753	3.5	8.5	6.0	2.1	6781	chr3L	23042226	intergenic	not near genes	chr3L	23045616	intergenic	not near genes	chr3L	23049007	intergenic	not near genes	chr3L_15_23045001	chr3L_23045001	UG5N_1-HE
2064	chr3L	23491389	23491414	chr3L	23491661	23491686	INE-1	9	272	21.5	20.5	21.0	0.4	297	chr3L	23491389	intergenic	not near genes	chr3L	23491538	intergenic	not near genes	chr3L	23491686	intergenic	not near genes	chr3L_9_23490001	chr3L_23490001	UG5N_1-HE
2069	chr3L	24012406	24012436	chr3L	24020748	24020778	roo	10	8342	2.5	4.0	3.2	2.4	8372	chr3L	24012406	intergenic	not near genes	chr3L	24016592	intergenic	not near genes	chr3L	24020778	intergenic	not near genes	chr3L_10_24015001	chr3L_24015001	UG5N_1-HE
2070	chr3L	24021297	24021309	chr3L	24022455	24022467	1360	5	1158	2.5	5.5	4.0	1.0	1170	chr3L	24021297	intergenic	not near genes	chr3L	24021882	intergenic	not near genes	chr3L	24022467	intergenic	not near genes	chr3L_5_24020001	chr3L_24020001	UG5N_1-HE
2072	chr3L	24168789	24168822	chr3L	24176118	24176151	ZAM	9	7324	4.5	9.0	6.8	1.2	7362	chr3L	24168789	intron	Snap25 +	chr3L	24172470	intron	Snap25 +	chr3L	24176151	intron	Snap25 +	chr3L_9_24170001	chr3L_24170001	UG5N_1-HE
2080	chr3L	25406603	25406615	chr3L	25411026	25411038	Doc	5	4423	14.5	8.0	11.2	0.4	4435	chr3L	25406603	intergenic	not near genes	chr3L	25408820	intergenic	not near genes	chr3L	25411038	intergenic	not near genes	chr3L_5_25405001	chr3L_25405001	UG5N_1-HE
2081	chr3L	25455325	25455353	chr3L	25455924	25455952	INE-1	6	598	2.0	3.0	2.5	1.7	627	chr3L	25455325	intergenic	not near genes	chr3L	25455638	intergenic	not near genes	chr3L	25455952	intergenic	not near genes	chr3L_6_25455001	chr3L_25455001	UG5N_1-HE
2082	chr3L	25628505	25628522	chr3L	25633277	25633294	F-element	9	4772	4.5	5.0	4.8	1.6	4789	chr3L	25628505	intron	CG41343 -	chr3L	25630900	intron	CG41343 -	chr3L	25633294	intron	CG41343 -	chr3L_9_25630001	chr3L_25630001	UG5N_1-HE
2084	chr3L	24566081	24566082	chr3L	25889010	25889021	micropia	4	1322933	9.0	32.0	20.5	0.2	1322940	chr3L	24566081	intergenic	not near genes	chr3L	25227551	intergenic	not near genes	chr3L	25889021	intron	CG40178 -	chr3L_4_25225001	chr3L_25225001	UG5N_1-HE
2091	chr3L	27727640	27727652	chr3L	27728745	27728760	G-element	4	1107	4.0	3.5	3.8	0.8	1120	chr3L	27727640	intergenic	not near genes	chr3L	27728200	intergenic	not near genes	chr3L	27728760	intergenic	not near genes	chr3L_4_27725001	chr3L_27725001	UG5N_1-HE
2092	chr3L	27980695	27980729	chr3L	27985494	27985528	Doc	10	4799	0.0	1.5	0.8	5.6	4833	chr3L	27980695	intron	CG17514 -	chr3L	27983112	intron	CG17514 -	chr3L	27985528	intron	CG17514 -	chr3L_10_27980001	chr3L_27980001	UG5N_1-HE
2098	chr3R	1511854	1511859	chr3R	2516772	2516777	297	4	1004918	16.0	10.0	13.0	0.3	1004923	chr3R	1511854	intergenic	not near genes	chr3R	2014316	intergenic	not near genes	chr3R	2516777	intergenic	not near genes	chr3R_4_2010001	chr3R_2010001	UG5N_1-HE
2108	chr3R	4206072	4206101	chr3R	4211648	4211677	mdg3	7	5576	1.0	1.5	1.2	3.2	5605	chr3R	4206072	intron	CG14636 -	chr3R	4208874	intron	CG14636 -	chr3R	4211677	intron	CG14636 -	chr3R_7_4205001	chr3R_4205001	UG5N_1-HE
2111	chr3R	4366755	4366791	chr3R	4375139	4375175	roo	13	8384	8.0	6.5	7.2	1.6	8420	chr3R	4366755	3` UTR	CG1090 +	chr3R	4370965	intergenic	not near genes	chr3R	4375175	5` UTR	CR44922 +	chr3R_13_4370001	chr3R_4370001	UG5N_1-HE
2112	chr3R	4408410	4408434	chr3R	4412714	4412739	Juan	14	4305	6.0	3.0	4.5	2.5	4329	chr3R	4408410	intron	CG32944 -	chr3R	4410574	intron	CG32944 -	chr3R	4412739	intron	CG32944 -	chr3R_14_4410001	chr3R_4410001	UG5N_1-HE
2114	chr3R	4538901	4538903	chr3R	4540162	4540164	1360	5	1261	8.0	15.5	11.8	0.4	1263	chr3R	4538901	intron	CG34357 -	chr3R	4539532	intron	CG34357 -	chr3R	4540164	intron	CG34357 -	chr3R_5_4535001	chr3R_4535001	UG5N_1-HE
2115	chr3R	4538904	4538912	chr3R	4540158	4540173	1360	9	1259	6.5	14.0	10.2	0.8	1269	chr3R	4538904	intron	CG34357 -	chr3R	4539538	intron	CG34357 -	chr3R	4540173	intron	CG34357 -	chr3R_9_4535001	chr3R_4535001	UG5N_1-HE
2117	chr3R	4609547	4609582	chr3R	4610712	4610747	1360	19	1165	8.0	6.0	7.0	2.4	1200	chr3R	4609547	intergenic	not near genes	chr3R	4610147	intergenic	not near genes	chr3R	4610747	intergenic	not near genes	chr3R_19_4610001	chr3R_4610001	UG5N_1-HE
2118	chr3R	4683176	4683208	chr3R	4684936	4684968	S-element	22	1760	9.5	12.0	10.8	1.9	1792	chr3R	4683176	intron	CG43427 +	chr3R	4684072	intron	CG43427 +	chr3R	4684968	intron	CG43427 +	chr3R_22_4680001	chr3R_4680001	UG5N_1-HE
2119	chr3R	4753246	4753266	chr3R	4757550	4757570	F-element	11	4304	7.5	6.0	6.8	1.4	4324	chr3R	4753246	intron,intron	atms +,CG44098 -	chr3R	4755408	intron,intron	atms +,CG44098 -	chr3R	4757570	intron,exon	atms +,CG44098 -	chr3R_11_4755001	chr3R_4755001	UG5N_1-HE
2120	chr3R	4759725	4759749	chr3R	4761223	4761247	hopper2	10	1497	4.0	14.0	9.0	1.0	1522	chr3R	4759725	intron,intron	atms +,CG44098 -	chr3R	4760486	intron,intron	atms +,CG44098 -	chr3R	4761247	intron,intron	atms +,CG44098 -	chr3R_10_4760001	chr3R_4760001	UG5N_1-HE
2123	chr3R	4887478	4887512	chr3R	4894856	4894883	rover	15	7376	1.0	4.5	2.8	3.9	7405	chr3R	4887478	intergenic	not near genes	chr3R	4891180	intergenic	not near genes	chr3R	4894883	intergenic	not near genes	chr3R_15_4890001	chr3R_4890001	UG5N_1-HE
2129	chr3R	5045849	5045874	chr3R	5052952	5052977	HMS-Beagle	11	7103	3.5	4.5	4.0	2.2	7128	chr3R	5045849	intron	CR43635 -	chr3R	5049413	intergenic	not near genes	chr3R	5052977	intergenic	CR45588 -	chr3R_11_5045001	chr3R_5045001	UG5N_1-HE
2131	chr3R	5067979	5068014	chr3R	5073497	5073532	mdg3	20	5518	4.0	8.0	6.0	2.9	5553	chr3R	5067979	intergenic	not near genes	chr3R	5070756	intergenic	not near genes	chr3R	5073532	intergenic	not near genes	chr3R_20_5070001	chr3R_5070001	UG5N_1-HE
2141	chr3R	5338397	5338426	chr3R	5343575	5343604	Rt1c	12	5178	9.5	10.0	9.8	1.1	5207	chr3R	5338397	intron	mtd -	chr3R	5341000	intron	mtd -	chr3R	5343604	intron	mtd -	chr3R_12_5340001	chr3R_5340001	UG5N_1-HE
2145	chr3R	5445962	5445994	chr3R	5452423	5452455	Burdock	12	6461	3.0	3.5	3.2	2.9	6493	chr3R	5445962	intron	CG14669 +	chr3R	5449208	intron	CG14669 +	chr3R	5452455	intron	CG14669 +	chr3R_12_5445001	chr3R_5445001	UG5N_1-HE
2153	chr3R	5746027	5746045	chr3R	5746269	5746287	pogo	7	242	0.5	5.0	2.8	1.8	260	chr3R	5746027	3` UTR	Madm +	chr3R	5746157	3` UTR	Madm +	chr3R	5746287	3` UTR	Madm +	chr3R_7_5745001	chr3R_5745001	UG5N_1-HE
2155	chr3R	5809112	5809143	chr3R	5809354	5809385	pogo	8	239	5.0	4.5	4.8	1.4	273	chr3R	5809112	3` UTR	CG11000 +	chr3R	5809248	3` UTR	CG11000 +	chr3R	5809385	3` UTR	CG11000 +	chr3R_8_5805001	chr3R_5805001	UG5N_1-HE
2156	chr3R	5822377	5822398	chr3R	5823545	5823566	1360	7	1168	6.5	3.5	5.0	1.2	1189	chr3R	5822377	3` UTR	CG2023 -	chr3R	5822972	3` UTR	CG2023 -	chr3R	5823566	3` UTR	CG2023 -	chr3R_7_5820001	chr3R_5820001	UG5N_1-HE
2161	chr3R	5927561	5927587	chr3R	5927800	5927826	pogo	19	239	5.5	7.5	6.5	2.5	265	chr3R	5927561	intron	CG34113 -	chr3R	5927694	intron	CG34113 -	chr3R	5927826	intron	CG34113 -	chr3R_19_5925001	chr3R_5925001	UG5N_1-HE
2163	chr3R	6015964	6015994	chr3R	6024445	6024476	Tirant	13	8482	4.0	6.5	5.2	2.1	8512	chr3R	6015964	intergenic	not near genes	chr3R	6020220	intergenic	not near genes	chr3R	6024476	intergenic	not near genes	chr3R_13_6020001	chr3R_6020001	UG5N_1-HE
2169	chr3R	6158513	6158539	chr3R	6167096	6167123	Tirant	4	8583	5.0	5.5	5.2	0.6	8610	chr3R	6158513	intergenic	not near genes	chr3R	6162818	intergenic	not near genes	chr3R	6167123	intergenic	CG1077 +	chr3R_4_6160001	chr3R_6160001	UG5N_1-HE
2170	chr3R	6175171	6175206	chr3R	6182444	6182479	HMS-Beagle2	12	7273	1.0	2.0	1.5	4.8	7308	chr3R	6175171	intergenic	Osi1 +	chr3R	6178825	intron	CR45194 +	chr3R	6182479	intergenic	CR45194 +	chr3R_12_6175001	chr3R_6175001	UG5N_1-HE
2171	chr3R	6206287	6206316	chr3R	6206505	6206534	BS	17	218	4.0	7.0	5.5	2.6	247	chr3R	6206287	exon	Osi24 +	chr3R	6206410	intron	Osi24 +	chr3R	6206534	intron	Osi24 +	chr3R_17_6205001	chr3R_6205001	UG5N_1-HE
2175	chr3R	6510022	6510031	chr3R	6515104	6515113	jockey	8	5082	7.5	2.5	5.0	1.3	5091	chr3R	6510022	intergenic	not near genes	chr3R	6512568	intergenic	not near genes	chr3R	6515113	intergenic	not near genes	chr3R_8_6510001	chr3R_6510001	UG5N_1-HE
2176	chr3R	6510032	6510054	chr3R	6515103	6515136	jockey	11	5081	4.0	2.5	3.2	2.6	5104	chr3R	6510032	intergenic	not near genes	chr3R	6512584	intergenic	not near genes	chr3R	6515136	intergenic	not near genes	chr3R_11_6510001	chr3R_6510001	UG5N_1-HE
2182	chr3R	6737496	6737532	chr3R	6739284	6739319	Doc	13	1787	2.0	2.5	2.2	4.1	1823	chr3R	6737496	intron	pb -	chr3R	6738408	intron	pb -	chr3R	6739319	intron	pb -	chr3R_13_6735001	chr3R_6735001	UG5N_1-HE
2215	chr3R	7694575	7694610	chr3R	7713637	7713672	invader3	20	19062	6.0	3.0	4.5	3.6	19097	chr3R	7694575	3` UTR	Nlg1 +	chr3R	7704124	intergenic	not near genes	chr3R	7713672	intergenic	not near genes	chr3R_20_7700001	chr3R_7700001	UG5N_1-HE
2217	chr3R	7729463	7729499	chr3R	7737402	7737438	Stalker2	23	7938	4.5	5.0	4.8	4.0	7975	chr3R	7729463	intergenic	not near genes	chr3R	7733450	intergenic	not near genes	chr3R	7737438	intergenic	not near genes	chr3R_23_7730001	chr3R_7730001	UG5N_1-HE
2223	chr3R	7849639	7849677	chr3R	7850807	7850845	1360	17	1168	1.5	4.0	2.8	4.5	1206	chr3R	7849639	intron	CG34384 +	chr3R	7850242	intron	CG34384 +	chr3R	7850845	intron	CG34384 +	chr3R_17_7850001	chr3R_7850001	UG5N_1-HE
2228	chr3R	7973312	7973346	chr3R	7974375	7974411	1360	8	1064	4.0	2.0	3.0	2.0	1099	chr3R	7973312	intergenic	not near genes	chr3R	7973862	intergenic	not near genes	chr3R	7974411	3` UTR	CD98hc -	chr3R_8_7970001	chr3R_7970001	UG5N_1-HE
2231	chr3R	8090565	8090568	chr3R	8094043	8094046	297	4	3478	11.0	7.0	9.0	0.4	3481	chr3R	8090565	intergenic	CR44330 +	chr3R	8092306	intergenic	not near genes	chr3R	8094046	intergenic	CG7900 +	chr3R_4_8090001	chr3R_8090001	UG5N_1-HE
2232	chr3R	8094405	8094441	chr3R	8099711	8099747	Transpac	12	5305	4.0	5.5	4.8	2.1	5342	chr3R	8094405	intron	CG7900 +	chr3R	8097076	intron	CG7900 +	chr3R	8099747	intron	CG7900 +	chr3R_12_8095001	chr3R_8095001	UG5N_1-HE
2233	chr3R	8101761	8101792	chr3R	8104846	8104877	G2	14	3085	5.0	3.5	4.2	2.7	3116	chr3R	8101761	exon	CG7900 +	chr3R	8103319	intron	CG7900 +	chr3R	8104877	3` UTR	CG7900 +	chr3R_14_8100001	chr3R_8100001	UG5N_1-HE
2236	chr3R	8207552	8207588	chr3R	8208398	8208434	F-element	10	842	3.0	6.5	4.8	1.7	882	chr3R	8207552	intergenic	not near genes	chr3R	8207993	intergenic	not near genes	chr3R	8208434	intergenic	not near genes	chr3R_10_8205001	chr3R_8205001	UG5N_1-HE
2241	chr3R	8403005	8403041	chr3R	8412172	8412208	roo	28	9166	12.5	14.5	13.5	1.9	9203	chr3R	8403005	intron	CG45263 -	chr3R	8407606	intron	CG45263 -	chr3R	8412208	intron	CG45263 -	chr3R_28_8405001	chr3R_8405001	UG5N_1-HE
2248	chr3R	8570483	8570508	chr3R	8575118	8575145	HMS-Beagle	9	4635	5.5	2.5	4.0	1.8	4662	chr3R	8570483	intergenic	not near genes	chr3R	8572814	intergenic	not near genes	chr3R	8575145	intergenic	not near genes	chr3R_9_8570001	chr3R_8570001	UG5N_1-HE
2249	chr3R	8601776	8601799	chr3R	8610926	8610953	roo	12	9154	9.5	6.5	8.0	1.3	9177	chr3R	8601776	intron	5-HT2B +	chr3R	8606364	intron	5-HT2B +	chr3R	8610953	intron	5-HT2B +	chr3R_12_8605001	chr3R_8605001	UG5N_1-HE
2250	chr3R	8707359	8707386	chr3R	8709801	8709812	jockey	19	2441	8.5	11.5	10.0	1.7	2453	chr3R	8707359	intergenic	not near genes	chr3R	8708586	intergenic	not near genes	chr3R	8709812	intergenic	not near genes	chr3R_19_8705001	chr3R_8705001	UG5N_1-HE
2253	chr3R	8894869	8894904	chr3R	8896026	8896061	1360	21	1157	7.0	5.5	6.2	2.9	1192	chr3R	8894869	intron	pyd -	chr3R	8895465	intron	pyd -	chr3R	8896061	intron	pyd -	chr3R_21_8895001	chr3R_8895001	UG5N_1-HE
2267	chr3R	9278777	9278808	chr3R	9284038	9284069	Rt1a	19	5261	4.0	3.0	3.5	4.2	5292	chr3R	9278777	intergenic	not near genes	chr3R	9281423	intergenic	not near genes	chr3R	9284069	intergenic	not near genes	chr3R_19_9280001	chr3R_9280001	UG5N_1-HE
2268	chr3R	9304527	9304539	chr3R	9311815	9311827	Stalker4	4	7288	15.0	3.5	9.2	0.4	7300	chr3R	9304527	intron	CG8861 -	chr3R	9308177	intron	CG8861 -	chr3R	9311827	intron	CG8861 -	chr3R_4_9305001	chr3R_9305001	UG5N_1-HE
2269	chr3R	9319571	9319606	chr3R	9320007	9320042	jockey	16	436	5.5	7.0	6.2	2.2	471	chr3R	9319571	intron	CG8861 -	chr3R	9319806	intron	CG8861 -	chr3R	9320042	intron	CG8861 -	chr3R_16_9315001	chr3R_9315001	UG5N_1-HE
2271	chr3R	9361826	9361843	chr3R	9362068	9362084	pogo	4	242	7.5	6.5	7.0	0.5	258	chr3R	9361826	3` UTR	CG45050 +	chr3R	9361955	3` UTR	CG45050 +	chr3R	9362084	3` UTR	CG45050 +	chr3R_4_9360001	chr3R_9360001	UG5N_1-HE
2276	chr3R	9699922	9699934	chr3R	9700133	9700145	1360	8	211	4.0	5.0	4.5	1.5	223	chr3R	9699922	intron	Unc-115a -	chr3R	9700034	intron	Unc-115a -	chr3R	9700145	intron	Unc-115a -	chr3R_8_9700001	chr3R_9700001	UG5N_1-HE
2282	chr3R	10231784	10231814	chr3R	10237362	10237370	mdg3	18	5577	2.5	3.0	2.8	4.7	5586	chr3R	10231784	intron	CG42795 +	chr3R	10234577	intron	CG42795 +	chr3R	10237370	intron	CG42795 +	chr3R_18_10230001	chr3R_10230001	UG5N_1-HE
2289	chr3R	10804192	10804206	chr3R	10811725	10811739	17.6	8	7533	1.0	6.5	3.8	1.7	7547	chr3R	10804192	intergenic	CG14692 -	chr3R	10807966	intergenic	not near genes	chr3R	10811739	3` UTR	CG14693 -	chr3R_8_10805001	chr3R_10805001	UG5N_1-HE
2302	chr3R	11065592	11065606	chr3R	11071247	11071261	297	5	5655	7.0	11.0	9.0	0.5	5669	chr3R	11065592	intergenic	not near genes	chr3R	11068426	intergenic	not near genes	chr3R	11071261	intergenic	not near genes	chr3R_5_11065001	chr3R_11065001	UG5N_1-HE
2316	chr3R	11379233	11379269	chr3R	11388389	11388425	roo	23	9156	7.5	9.0	8.2	2.5	9192	chr3R	11379233	intron	pros +	chr3R	11383829	intron	pros +	chr3R	11388425	intron	pros +	chr3R_23_11380001	chr3R_11380001	UG5N_1-HE
2327	chr3R	11841060	11841097	chr3R	11846252	11846289	BS	18	5190	6.5	6.5	6.5	2.4	5229	chr3R	11841060	intron	CG6959 -	chr3R	11843674	intron	CG6959 -	chr3R	11846289	intron	CG6959 -	chr3R_18_11840001	chr3R_11840001	UG5N_1-HE
2333	chr3R	12022884	12022914	chr3R	12025062	12025092	pogo	12	2178	3.0	5.5	4.2	2.3	2208	chr3R	12022884	intergenic	not near genes	chr3R	12023988	intergenic	not near genes	chr3R	12025092	intergenic	not near genes	chr3R_12_12020001	chr3R_12020001	UG5N_1-HE
2353	chr3R	12864542	12864551	chr3R	12865045	12865054	roo	4	503	5.0	5.5	5.2	0.6	512	chr3R	12864542	intergenic	not near genes	chr3R	12864798	intergenic	not near genes	chr3R	12865054	intergenic	not near genes	chr3R_4_12860001	chr3R_12860001	UG5N_1-HE
2355	chr3R	12920151	12920184	chr3R	12925355	12925386	copia	14	5202	6.0	7.5	6.8	1.8	5235	chr3R	12920151	intron	beat-Vb +	chr3R	12922768	intron	beat-Vb +	chr3R	12925386	intron	beat-Vb +	chr3R_14_12920001	chr3R_12920001	UG5N_1-HE
2362	chr3R	13135835	13135837	chr3R	13138001	13138003	pogo	4	2166	8.5	4.0	6.2	0.6	2168	chr3R	13135835	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13136919	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13138003	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R_4_13135001	chr3R_13135001	UG5N_1-HE
2363	chr3R	13143030	13143066	chr3R	13148608	13148644	mdg3	16	5578	4.5	3.5	4.0	3.2	5614	chr3R	13143030	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13145837	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13148644	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R_16_13145001	chr3R_13145001	UG5N_1-HE
2379	chr3R	13517222	13517258	chr3R	13520040	13520076	jockey	13	2818	3.5	8.0	5.8	1.9	2854	chr3R	13517222	intergenic	not near genes	chr3R	13518649	intergenic	not near genes	chr3R	13520076	intergenic	not near genes	chr3R_13_13515001	chr3R_13515001	UG5N_1-HE
2390	chr3R	14021638	14021662	chr3R	14023464	14023488	S-element	11	1826	6.0	5.5	5.8	1.6	1850	chr3R	14021638	intron	rdx -	chr3R	14022563	intron	rdx -	chr3R	14023488	intron	rdx -	chr3R_11_14020001	chr3R_14020001	UG5N_1-HE
2398	chr3R	14180810	14180841	chr3R	14185576	14185581	F-element	20	4765	7.0	9.5	8.2	2.2	4771	chr3R	14180810	intron	Dop1R1 -	chr3R	14183196	intron	Dop1R1 -	chr3R	14185581	intron	Dop1R1 -	chr3R_20_14180001	chr3R_14180001	UG5N_1-HE
2399	chr3R	14246391	14246416	chr3R	14247887	14247913	jockey	9	1496	6.0	3.5	4.8	1.6	1522	chr3R	14246391	intergenic	not near genes	chr3R	14247152	intergenic	not near genes	chr3R	14247913	intergenic	not near genes	chr3R_9_14245001	chr3R_14245001	UG5N_1-HE
2424	chr3R	15041423	15041459	chr3R	15045192	15045228	Doc	31	3769	7.5	7.5	7.5	3.6	3805	chr3R	15041423	intergenic	not near genes	chr3R	15043326	intergenic	not near genes	chr3R	15045228	intergenic	not near genes	chr3R_31_15040001	chr3R_15040001	UG5N_1-HE
2425	chr3R	15059276	15059310	chr3R	15059471	15059505	BS	4	195	0.0	0.0	0.0	4.0	229	chr3R	15059276	intron	dpr9 -	chr3R	15059390	intron	dpr9 -	chr3R	15059505	intron	dpr9 -	chr3R_4_15055001	chr3R_15055001	UG5N_1-HE
2427	chr3R	15079805	15079838	chr3R	15080047	15080080	pogo	10	242	4.5	2.0	3.2	2.4	275	chr3R	15079805	3` UTR	CG6966 -	chr3R	15079942	3` UTR	CG6966 -	chr3R	15080080	3` UTR	CG6966 -	chr3R_10_15075001	chr3R_15075001	UG5N_1-HE
2428	chr3R	15102494	15102530	chr3R	15109752	15109786	412	11	7257	6.0	4.5	5.2	1.8	7292	chr3R	15102494	intron	CG42788 -	chr3R	15106140	intron	CG42788 -	chr3R	15109786	intron	CG42788 -	chr3R_11_15105001	chr3R_15105001	UG5N_1-HE
2432	chr3R	15132053	15132082	chr3R	15135113	15135143	Juan	28	3060	12.0	11.0	11.5	2.2	3090	chr3R	15132053	intergenic	CG42788 -	chr3R	15133598	intergenic	not near genes	chr3R	15135143	3` UTR	CG6912 -	chr3R_28_15130001	chr3R_15130001	UG5N_1-HE
2434	chr3R	15162553	15162573	chr3R	15167321	15167341	F-element	11	4768	6.5	0.5	3.5	2.4	4788	chr3R	15162553	intron	Gyc88E +	chr3R	15164947	intron	Gyc88E +	chr3R	15167341	intron	Gyc88E +	chr3R_11_15160001	chr3R_15160001	UG5N_1-HE
2444	chr3R	15601167	15601196	chr3R	15608690	15608719	412	14	7523	4.5	6.0	5.2	2.3	7552	chr3R	15601167	intergenic	not near genes	chr3R	15604943	intergenic	not near genes	chr3R	15608719	intergenic	not near genes	chr3R_14_15600001	chr3R_15600001	UG5N_1-HE
2445	chr3R	15618749	15618763	chr3R	15626224	15626238	blood	12	7475	5.0	12.0	8.5	1.3	7489	chr3R	15618749	intergenic	not near genes	chr3R	15622494	intergenic	not near genes	chr3R	15626238	intergenic	not near genes	chr3R_12_15620001	chr3R_15620001	UG5N_1-HE
2461	chr3R	16189409	16189442	chr3R	16189812	16189846	invader4	14	404	5.5	1.0	3.2	3.3	437	chr3R	16189409	intron	sra +	chr3R	16189628	intron	sra +	chr3R	16189846	intron	sra +	chr3R_14_16185001	chr3R_16185001	UG5N_1-HE
2477	chr3R	16756322	16756354	chr3R	16762514	16762535	diver	19	6191	7.0	1.5	4.2	3.7	6213	chr3R	16756322	intron	bxd -	chr3R	16759428	intron	bxd -	chr3R	16762535	intron	bxd -	chr3R_19_16755001	chr3R_16755001	UG5N_1-HE
2496	chr3R	17294666	17294701	chr3R	17295095	17295130	BS	12	429	3.0	3.5	3.2	2.9	464	chr3R	17294666	intergenic	not near genes	chr3R	17294898	intergenic	not near genes	chr3R	17295130	intergenic	not near genes	chr3R_12_17290001	chr3R_17290001	UG5N_1-HE
2498	chr3R	17346681	17346720	chr3R	17348245	17348284	F-element	11	1564	0.5	6.5	3.5	2.4	1603	chr3R	17346681	intron	beat-IIa -	chr3R	17347482	intron	beat-IIa -	chr3R	17348284	intron	beat-IIa -	chr3R_11_17345001	chr3R_17345001	UG5N_1-HE
2507	chr3R	17591290	17591322	chr3R	17591727	17591732	F-element	6	430	3.5	5.0	4.2	1.2	442	chr3R	17591290	intergenic	not near genes	chr3R	17591511	intergenic	not near genes	chr3R	17591732	intergenic	not near genes	chr3R_6_17590001	chr3R_17590001	UG5N_1-HE
2523	chr3R	17925849	17925889	chr3R	17927317	17927357	hobo	32	1466	3.5	5.5	4.5	5.8	1508	chr3R	17925849	intron	cpo +	chr3R	17926603	intron	cpo +	chr3R	17927357	intron	cpo +	chr3R_32_17925001	chr3R_17925001	UG5N_1-HE
2532	chr3R	18032784	18032808	chr3R	18040453	18040477	opus	7	7669	0.0	4.5	2.2	2.2	7693	chr3R	18032784	intergenic	not near genes	chr3R	18036630	intergenic	not near genes	chr3R	18040477	intergenic	not near genes	chr3R_7_18035001	chr3R_18035001	UG5N_1-HE
2592	chr3R	20109537	20109571	chr3R	20114744	20114778	copia	15	5207	4.0	6.5	5.2	2.4	5241	chr3R	20109537	intergenic	not near genes	chr3R	20112158	intergenic	not near genes	chr3R	20114778	intergenic	CG10887 +	chr3R_15_20110001	chr3R_20110001	UG5N_1-HE
2595	chr3R	20156692	20156721	chr3R	20165861	20165892	roo	12	9171	4.0	7.5	5.8	1.8	9200	chr3R	20156692	intergenic	not near genes	chr3R	20161292	intergenic	not near genes	chr3R	20165892	intergenic	not near genes	chr3R_12_20160001	chr3R_20160001	UG5N_1-HE
2600	chr3R	20245275	20245303	chr3R	20248887	20248915	F-element	12	3612	4.0	3.5	3.8	2.5	3640	chr3R	20245275	3` UTR	Nlg4 +	chr3R	20247095	intergenic	not near genes	chr3R	20248915	intergenic	not near genes	chr3R_12_20245001	chr3R_20245001	UG5N_1-HE
2601	chr3R	20266514	20266549	chr3R	20272986	20273021	Burdock	21	6471	6.0	11.0	8.5	2.2	6507	chr3R	20266514	intron	cic +	chr3R	20269768	intron	cic +	chr3R	20273021	intron	cic +	chr3R_21_20265001	chr3R_20265001	UG5N_1-HE
2603	chr3R	20331000	20331031	chr3R	20331487	20331518	roo	11	487	5.0	7.5	6.2	1.5	518	chr3R	20331000	intergenic	Sirt2 +	chr3R	20331259	intergenic	Sirt2 +	chr3R	20331518	intergenic	not near genes	chr3R_11_20330001	chr3R_20330001	UG5N_1-HE
2611	chr3R	20506584	20506615	chr3R	20507388	20507419	BS	8	804	3.5	4.5	4.0	1.6	835	chr3R	20506584	intergenic	Or92a +	chr3R	20507002	intergenic	CG4288 -	chr3R	20507419	3` UTR	CG4288 -	chr3R_8_20505001	chr3R_20505001	UG5N_1-HE
2612	chr3R	20513001	20513012	chr3R	20515705	20515716	opus	6	2704	4.0	0.0	2.0	2.0	2715	chr3R	20513001	intergenic	not near genes	chr3R	20514358	intergenic	not near genes	chr3R	20515716	intergenic	not near genes	chr3R_6_20510001	chr3R_20510001	UG5N_1-HE
2624	chr3R	20854508	20854519	chr3R	20859270	20859274	Doc	5	4762	6.0	3.0	4.5	0.9	4766	chr3R	20854508	intron	Ir93a -	chr3R	20856891	intron	Ir93a -	chr3R	20859274	exon	Ir93a -	chr3R_5_20855001	chr3R_20855001	UG5N_1-HE
2632	chr3R	21141682	21141705	chr3R	21150164	21150187	Tirant	13	8482	4.5	4.5	4.5	2.4	8505	chr3R	21141682	intron	SNF4Agamma +	chr3R	21145934	intron	SNF4Agamma +	chr3R	21150187	intron	SNF4Agamma +	chr3R_13_21145001	chr3R_21145001	UG5N_1-HE
2648	chr3R	21609004	21609040	chr3R	21611637	21611674	NOF	13	2631	5.5	2.5	4.0	2.6	2670	chr3R	21609004	intron	InR -	chr3R	21610339	intron	InR -	chr3R	21611674	intron	InR -	chr3R_13_21610001	chr3R_21610001	UG5N_1-HE
2650	chr3R	21761123	21761146	chr3R	21768516	21768539	mdg1	7	7391	4.0	2.5	3.2	1.7	7416	chr3R	21761123	exon	CG42335 +	chr3R	21764831	intron	CG42335 +	chr3R	21768539	exon	CG42335 +	chr3R_7_21760001	chr3R_21760001	UG5N_1-HE
2663	chr3R	22234708	22234714	chr3R	22236027	22236034	pogo	4	1320	2.5	0.0	1.2	1.8	1326	chr3R	22234708	intron	SKIP +	chr3R	22235371	intron	SKIP +	chr3R	22236034	intron	SKIP +	chr3R_4_22235001	chr3R_22235001	UG5N_1-HE
2668	chr3R	22450549	22450578	chr3R	22453190	22453219	NOF	12	2640	3.5	6.0	4.8	2.1	2670	chr3R	22450549	intron	CG34376 +	chr3R	22451884	intron	CG34376 +	chr3R	22453219	intron	CG34376 +	chr3R_12_22450001	chr3R_22450001	UG5N_1-HE
2685	chr3R	22881190	22881232	chr3R	22884897	22884939	Doc	19	3707	4.5	6.0	5.2	3.1	3749	chr3R	22881190	intergenic	not near genes	chr3R	22883064	intergenic	not near genes	chr3R	22884939	intergenic	not near genes	chr3R_19_22880001	chr3R_22880001	UG5N_1-HE
2703	chr3R	23558397	23558429	chr3R	23560179	23560211	Bari1	14	1781	3.0	3.0	3.0	3.5	1814	chr3R	23558397	intron	beat-IV +	chr3R	23559304	intron	beat-IV +	chr3R	23560211	intron	beat-IV +	chr3R_14_23555001	chr3R_23555001	UG5N_1-HE
2710	chr3R	23684697	23684728	chr3R	23685180	23685215	roo	12	483	5.0	7.5	6.2	1.7	518	chr3R	23684697	exon	CG18754 +	chr3R	23684956	intron	CG18754 +	chr3R	23685215	exon	CG18754 +	chr3R_12_23680001	chr3R_23680001	UG5N_1-HE
2717	chr3R	23835401	23835424	chr3R	23844552	23844575	roo	13	9151	8.0	0.0	4.0	2.6	9174	chr3R	23835401	intron	CG34355 +	chr3R	23839988	intron	CG34355 +	chr3R	23844575	intron	CG34355 +	chr3R_13_23835001	chr3R_23835001	UG5N_1-HE
2728	chr3R	24072083	24072111	chr3R	24072522	24072534	jockey	12	436	12.5	0.0	6.2	1.7	451	chr3R	24072083	intron	4EHP -	chr3R	24072308	intron	4EHP -	chr3R	24072534	intron	4EHP -	chr3R_12_24070001	chr3R_24070001	UG5N_1-HE
2730	chr3R	24076918	24076949	chr3R	24078386	24078417	hobo	9	1468	3.5	2.0	2.8	2.4	1499	chr3R	24076918	intron	4EHP -	chr3R	24077668	intron	4EHP -	chr3R	24078417	intron	4EHP -	chr3R_9_24075001	chr3R_24075001	UG5N_1-HE
2735	chr3R	10820231	10820233	chr3R	24203324	24203326	412	4	13383093	27.5	13.5	20.5	0.2	13383095	chr3R	10820231	intergenic	not near genes	chr3R	17511778	intergenic	not near genes	chr3R	24203326	intron	twin -	chr3R_4_17510001	chr3R_17510001	UG5N_1-HE
2736	chr3R	24207215	24207247	chr3R	24212292	24212324	flea	12	5077	2.0	7.5	4.8	2.1	5109	chr3R	24207215	intron	twin -	chr3R	24209770	intron	twin -	chr3R	24212324	intron	twin -	chr3R_12_24205001	chr3R_24205001	UG5N_1-HE
2744	chr3R	24493273	24493310	chr3R	24493503	24493540	BS	34	230	6.0	8.5	7.2	4.1	267	chr3R	24493273	intergenic	not near genes	chr3R	24493406	intergenic	not near genes	chr3R	24493540	intergenic	not near genes	chr3R_34_24490001	chr3R_24490001	UG5N_1-HE
2752	chr3R	24730091	24730119	chr3R	24732470	24732498	Doc	7	2378	1.5	0.0	0.8	3.9	2407	chr3R	24730091	intron	tok +	chr3R	24731294	intron	tok +	chr3R	24732498	intron	tok +	chr3R_7_24730001	chr3R_24730001	UG5N_1-HE
2780	chr3R	25832705	25832723	chr3R	25841875	25841906	roo	12	9182	7.5	6.5	7.0	1.5	9201	chr3R	25832705	exon	alpha4GT2 +	chr3R	25837306	intron	alpha4GT2 +	chr3R	25841906	exon	alpha4GT2 +	chr3R_12_25835001	chr3R_25835001	UG5N_1-HE
2790	chr3R	26108834	26108843	chr3R	26117417	26117421	Tirant	4	8582	7.5	0.0	3.8	0.8	8587	chr3R	26108834	5` UTR	CG31324 +	chr3R	26113128	intron	CG31324 +	chr3R	26117421	intron	CG31324 +	chr3R_4_26110001	chr3R_26110001	UG5N_1-HE
2800	chr3R	26376323	26376354	chr3R	26385484	26385515	roo	12	9160	5.0	0.0	2.5	3.4	9192	chr3R	26376323	intergenic	not near genes	chr3R	26380919	intergenic	not near genes	chr3R	26385515	intergenic	not near genes	chr3R_12_26380001	chr3R_26380001	UG5N_1-HE
2807	chr3R	26558326	26558357	chr3R	26565640	26565670	Stalker4	6	7313	8.0	3.5	5.8	0.9	7344	chr3R	26558326	intron	scrib +	chr3R	26561998	intron	scrib +	chr3R	26565670	intron	scrib +	chr3R_6_26560001	chr3R_26560001	UG5N_1-HE
2815	chr3R	26810550	26810580	chr3R	26811036	26811066	roo	16	486	6.5	8.5	7.5	1.9	516	chr3R	26810550	intron	Tl +	chr3R	26810808	intron	Tl +	chr3R	26811066	intron	Tl +	chr3R_16_26810001	chr3R_26810001	UG5N_1-HE
2821	chr3R	27007402	27007436	chr3R	27016538	27016572	roo	20	9136	7.0	11.5	9.2	2.0	9170	chr3R	27007402	intron	RYa-R +	chr3R	27011987	intron	RYa-R +	chr3R	27016572	intron	RYa-R +	chr3R_20_27010001	chr3R_27010001	UG5N_1-HE
2828	chr3R	27140512	27140547	chr3R	27148123	27148158	412	25	7610	9.0	3.5	6.2	3.5	7646	chr3R	27140512	intron	CG6051 -	chr3R	27144335	intron	CG6051 -	chr3R	27148158	intron	CG6051 -	chr3R_25_27140001	chr3R_27140001	UG5N_1-HE
2834	chr3R	27342795	27342824	chr3R	27351377	27351404	Tirant	17	8582	6.0	5.0	5.5	2.6	8609	chr3R	27342795	intron	CG42534 +	chr3R	27347100	intron	CG42534 +	chr3R	27351404	intron	CG42534 +	chr3R_17_27345001	chr3R_27345001	UG5N_1-HE
2841	chr3R	27521157	27521189	chr3R	27530367	27530399	roo	7	9210	3.5	3.0	3.2	1.7	9242	chr3R	27521157	intron	CG12885 +	chr3R	27525778	intron	CG12885 +	chr3R	27530399	intron	CG12885 +	chr3R_7_27525001	chr3R_27525001	UG5N_1-HE
2848	chr3R	27725562	27725593	chr3R	27731005	27731036	I-element	6	5443	3.5	2.5	3.0	1.5	5474	chr3R	27725562	intergenic	not near genes	chr3R	27728299	intergenic	not near genes	chr3R	27731036	intergenic	not near genes	chr3R_6_27725001	chr3R_27725001	UG5N_1-HE
2853	chr3R	27856758	27856790	chr3R	27858242	27858274	hopper2	23	1483	8.0	5.0	6.5	3.1	1516	chr3R	27856758	intron	CG34353 -	chr3R	27857516	intron	CG34353 -	chr3R	27858274	intron	CG34353 -	chr3R_23_27855001	chr3R_27855001	UG5N_1-HE
2854	chr3R	27862954	27862987	chr3R	27868260	27868293	Transpac	25	5303	4.5	7.5	6.0	3.6	5339	chr3R	27862954	intron	CG34353 -	chr3R	27865624	intron	CG34353 -	chr3R	27868293	intron	CG34353 -	chr3R_25_27865001	chr3R_27865001	UG5N_1-HE
2857	chr3R	27875697	27875733	chr3R	27882753	27882789	297	28	7055	6.0	5.5	5.8	4.1	7092	chr3R	27875697	intron	CG34353 -	chr3R	27879243	intron	CG34353 -	chr3R	27882789	intron	CG34353 -	chr3R_28_27875001	chr3R_27875001	UG5N_1-HE
2859	chr3R	28068491	28068527	chr3R	28073934	28073970	I-element	12	5442	3.5	2.5	3.0	3.0	5479	chr3R	28068491	intron	CG34362 +	chr3R	28071230	intron	CG34362 +	chr3R	28073970	intron	CG34362 +	chr3R_12_28070001	chr3R_28070001	UG5N_1-HE
2862	chr3R	28173668	28173703	chr3R	28181099	28181134	mdg1	11	7431	1.5	1.5	1.5	4.4	7466	chr3R	28173668	intron	CG34354 +	chr3R	28177401	intron	CG34354 +	chr3R	28181134	intron	CG34354 +	chr3R_11_28175001	chr3R_28175001	UG5N_1-HE
2866	chr3R	28253336	28253370	chr3R	28255847	28255881	jockey	16	2510	6.5	4.5	5.5	2.5	2545	chr3R	28253336	intergenic	not near genes	chr3R	28254608	intergenic	not near genes	chr3R	28255881	intergenic	not near genes	chr3R_16_28250001	chr3R_28250001	UG5N_1-HE
2868	chr3R	28302100	28302133	chr3R	28302540	28302573	jockey	9	440	6.5	4.5	5.5	1.4	473	chr3R	28302100	intergenic	not near genes	chr3R	28302336	intergenic	not near genes	chr3R	28302573	intergenic	not near genes	chr3R_9_28300001	chr3R_28300001	UG5N_1-HE
2888	chr3R	28758282	28758301	chr3R	28763900	28763919	roo	7	5618	10.0	0.0	5.0	1.2	5637	chr3R	28758282	intergenic	aqrs -	chr3R	28761100	intergenic	not near genes	chr3R	28763919	intergenic	not near genes	chr3R_7_28760001	chr3R_28760001	UG5N_1-HE
2889	chr3R	28763903	28763921	chr3R	28771347	28771365	Stalker4	8	7444	0.0	0.0	0.0	8.0	7462	chr3R	28763903	intergenic	not near genes	chr3R	28767634	intergenic	not near genes	chr3R	28771365	intergenic	not near genes	chr3R_8_28765001	chr3R_28765001	UG5N_1-HE
2890	chr3R	28792868	28792894	chr3R	28797963	28797990	jockey	4	5096	3.5	3.0	3.2	1.0	5122	chr3R	28792868	intergenic	not near genes	chr3R	28795429	intergenic	not near genes	chr3R	28797990	intergenic	not near genes	chr3R_4_28795001	chr3R_28795001	UG5N_1-HE
2901	chr3R	29079382	29079411	chr3R	29080755	29080784	NOF	18	1373	3.0	3.0	3.0	4.5	1402	chr3R	29079382	intron	CG11873 +	chr3R	29080083	intron	CG11873 +	chr3R	29080784	intron	CG11873 +	chr3R_18_29080001	chr3R_29080001	UG5N_1-HE
2908	chr3R	29319821	29319850	chr3R	29320141	29320170	jockey	14	320	7.5	3.0	5.2	2.3	349	chr3R	29319821	intergenic	Cnx99A -	chr3R	29319996	intergenic	Cnx99A -	chr3R	29320170	intergenic	not near genes	chr3R_14_29315001	chr3R_29315001	UG5N_1-HE
2922	chr3R	29738263	29738297	chr3R	29739731	29739764	hobo	10	1468	4.0	3.0	3.5	2.2	1501	chr3R	29738263	intergenic	CG1969 +,CG7598 +	chr3R	29739014	intron	CG1969 +	chr3R	29739764	5` UTR	CG1969 +	chr3R_10_29735001	chr3R_29735001	UG5N_1-HE
2923	chr3R	29760364	29760389	chr3R	29761566	29761591	pogo	8	1202	5.0	2.0	3.5	1.8	1227	chr3R	29760364	intergenic	not near genes	chr3R	29760978	intergenic	not near genes	chr3R	29761591	intergenic	not near genes	chr3R_8_29760001	chr3R_29760001	UG5N_1-HE
2925	chr3R	29882021	29882045	chr3R	29891179	29891203	roo	10	9158	4.5	4.5	4.5	1.8	9182	chr3R	29882021	intron	CG31038 +	chr3R	29886612	intron	CG31038 +	chr3R	29891203	intron	CG31038 +	chr3R_10_29885001	chr3R_29885001	UG5N_1-HE
2931	chr3R	30084848	30084883	chr3R	30086316	30086351	hobo	11	1468	2.0	4.5	3.2	2.6	1503	chr3R	30084848	intron	sima +	chr3R	30085600	intron	sima +	chr3R	30086351	intron	sima +	chr3R_11_30085001	chr3R_30085001	UG5N_1-HE
2935	chr3R	30238761	30238791	chr3R	30239926	30239957	1360	13	1165	4.0	5.5	4.8	2.2	1196	chr3R	30238761	intergenic	not near genes	chr3R	30239359	intergenic	not near genes	chr3R	30239957	intergenic	not near genes	chr3R_13_30235001	chr3R_30235001	UG5N_1-HE
2939	chr3R	30317328	30317356	chr3R	30324921	30324949	roo	6	7592	1.0	4.5	2.8	1.6	7621	chr3R	30317328	intron	hdc +	chr3R	30321138	intron	hdc +	chr3R	30324949	intron	hdc +	chr3R_6_30320001	chr3R_30320001	UG5N_1-HE
2941	chr3R	30375539	30375572	chr3R	30383165	30383198	412	18	7626	5.0	6.5	5.8	2.6	7659	chr3R	30375539	intergenic	not near genes	chr3R	30379368	intergenic	not near genes	chr3R	30383198	intergenic	not near genes	chr3R_18_30375001	chr3R_30375001	UG5N_1-HE
2942	chr3R	30396215	30396222	chr3R	30404482	30404489	roo	6	8267	1.0	3.0	2.0	2.0	8274	chr3R	30396215	intergenic	not near genes	chr3R	30400352	intergenic	not near genes	chr3R	30404489	5` UTR	CR45570 +	chr3R_6_30400001	chr3R_30400001	UG5N_1-HE
2945	chr3R	30480477	30480510	chr3R	30482940	30482978	jockey	7	2466	3.5	3.5	3.5	1.6	2501	chr3R	30480477	intron	PH4alphaEFB +	chr3R	30481728	intron	PH4alphaEFB +	chr3R	30482978	intron	PH4alphaEFB +	chr3R_7_30480001	chr3R_30480001	UG5N_1-HE
2949	chr3R	30679516	30679550	chr3R	30686986	30687020	blood	14	7470	5.0	3.5	4.2	2.7	7504	chr3R	30679516	intergenic	not near genes	chr3R	30683268	intergenic	not near genes	chr3R	30687020	intergenic	not near genes	chr3R_14_30680001	chr3R_30680001	UG5N_1-HE
2952	chr3R	30818807	30818846	chr3R	30820373	30820412	1360	18	1566	5.5	5.0	5.2	2.9	1605	chr3R	30818807	intron	cindr +	chr3R	30819610	intron	cindr +	chr3R	30820412	intron	cindr +	chr3R_18_30815001	chr3R_30815001	UG5N_1-HE
2958	chr3R	31074228	31074245	chr3R	31081827	31081844	springer	5	7599	7.0	0.0	3.5	1.1	7616	chr3R	31074228	intron	Sox100B +	chr3R	31078036	intron	Sox100B +	chr3R	31081844	intron	Sox100B +	chr3R_5_31075001	chr3R_31075001	UG5N_1-HE
2965	chr3R	31279371	31279407	chr3R	31285563	31285599	diver	7	6192	5.5	2.0	3.8	1.5	6228	chr3R	31279371	intergenic	not near genes	chr3R	31282485	intergenic	not near genes	chr3R	31285599	intergenic	not near genes	chr3R_7_31280001	chr3R_31280001	UG5N_1-HE
2967	chr3R	31413090	31413123	chr3R	31418291	31418301	copia	17	5200	3.5	4.5	4.0	3.4	5211	chr3R	31413090	intron	Gprk2 +	chr3R	31415696	intron	Gprk2 +	chr3R	31418301	intron	Gprk2 +	chr3R_17_31415001	chr3R_31415001	UG5N_1-HE
2974	chr3R	31691535	31691563	chr3R	31696296	31696330	Doc	15	4766	4.5	6.0	5.2	2.4	4795	chr3R	31691535	intergenic	not near genes	chr3R	31693932	intergenic	not near genes	chr3R	31696330	intergenic	not near genes	chr3R_15_31690001	chr3R_31690001	UG5N_1-HE
2984	chr3R	31997989	31998025	chr3R	32005460	32005496	blood	28	7470	4.0	4.0	4.0	5.6	7507	chr3R	31997989	intron	heph -	chr3R	32001742	intron	heph -	chr3R	32005496	intron	heph -	chr3R_28_32000001	chr3R_32000001	UG5N_1-HE
2986	chr4	76508	76518	chr4	81951	81962	I-element	4	5444	8.0	4.0	6.0	0.6	5454	chr4	76508	intron	pan +	chr4	79235	intron	pan +	chr4	81962	intron	pan +	chr4_4_75001	chr4_75001	UG5N_1-HE
2988	chr4	319988	320018	chr4	328165	328195	Stalker2	5	8177	4.0	6.5	5.2	0.8	8207	chr4	319988	3` UTR	CG32850 +	chr4	324092	intron	CG32850 +	chr4	328195	3` UTR,3` UTR	CG32850 +,PMCA -	chr4_5_320001	chr4_320001	UG5N_1-HE
2993	chr4	671602	671630	chr4	680186	680208	Tirant	18	8584	5.0	10.0	7.5	2.1	8606	chr4	671602	intron	CG11360 +	chr4	675905	intron	CG11360 +	chr4	680208	intron	CG11360 +	chr4_18_675001	chr4_675001	UG5N_1-HE
3001	chrX	295857	295881	chrX	303478	303502	412	11	7621	7.5	6.5	7.0	1.4	7645	chrX	295857	intron	CG3777 +	chrX	299680	intron	CG3777 +	chrX	303502	intron	CG3777 +	chrX_11_295001	chrX_295001	UG5N_1-HE
3003	chrX	318468	318501	chrX	323555	323588	flea	25	5087	8.5	9.5	9.0	2.5	5120	chrX	318468	intron,intron	CG3777 +,CG32816 -	chrX	321028	intron,intron	CG3777 +,CG32816 -	chrX	323588	intron,intron	CG3777 +,CG32816 -	chrX_25_320001	chrX_320001	UG5N_1-HE
3005	chrX	428416	428451	chrX	434602	434621	3S18	18	6185	7.5	4.0	5.8	2.6	6205	chrX	428416	intron	CG32816 -	chrX	431518	intron	CG32816 -	chrX	434621	intron	CG32816 -	chrX_18_430001	chrX_430001	UG5N_1-HE
3010	chrX	551419	551453	chrX	558982	559015	412	19	7562	8.0	6.0	7.0	2.4	7596	chrX	551419	intron	Appl +	chrX	555217	intron	Appl +	chrX	559015	intron	Appl +	chrX_19_555001	chrX_555001	UG5N_1-HE
3024	chrX	812266	812297	chrX	817896	817927	297	9	5629	2.0	3.5	2.8	2.4	5661	chrX	812266	intron	CG43867 -	chrX	815096	intron	CG43867 -	chrX	817927	intron	CG43867 -	chrX_9_815001	chrX_815001	UG5N_1-HE
3025	chrX	827598	827635	chrX	835391	835428	roo	14	7793	6.0	5.0	5.5	2.2	7830	chrX	827598	intron	CG43867 -	chrX	831513	intron	CG43867 -	chrX	835428	intron	CG43867 -	chrX_14_830001	chrX_830001	UG5N_1-HE
3030	chrX	906703	906721	chrX	908493	908511	S-element	8	1790	3.0	4.5	3.8	1.7	1808	chrX	906703	intron	CG43867 -	chrX	907607	intron	CG43867 -	chrX	908511	intron	CG43867 -	chrX_8_905001	chrX_905001	UG5N_1-HE
3038	chrX	1357786	1357807	chrX	1367949	1367978	Doc	7	10170	6.5	7.0	6.8	0.9	10192	chrX	1357786	intergenic	png -	chrX	1362882	intergenic	not near genes	chrX	1367978	intergenic	not near genes	chrX_7_1360001	chrX_1360001	UG5N_1-HE
3040	chrX	1518033	1518075	chrX	1523436	1523478	jockey	12	5403	2.0	3.5	2.8	3.2	5445	chrX	1518033	intergenic	inc +	chrX	1520756	intergenic	not near genes	chrX	1523478	intergenic	not near genes	chrX_12_1520001	chrX_1520001	UG5N_1-HE
3042	chrX	1627972	1628003	chrX	1635441	1635467	gtwin	27	7469	9.5	13.5	11.5	2.2	7495	chrX	1627972	intron,intron	Mur2B -,br +	chrX	1631720	intron,intron	Mur2B -,br +	chrX	1635467	intron,intron	Mur2B -,br +	chrX_27_1630001	chrX_1630001	UG5N_1-HE
3044	chrX	1930534	1930563	chrX	1938106	1938135	opus	8	7572	5.0	2.0	3.5	1.8	7601	chrX	1930534	intergenic	CG11596 +	chrX	1934334	intergenic	not near genes	chrX	1938135	3` UTR	CG3857 -	chrX_8_1930001	chrX_1930001	UG5N_1-HE
3045	chrX	1954890	1954914	chrX	1962831	1962834	Stalker2	6	7937	3.0	2.5	2.8	1.6	7944	chrX	1954890	intron	Hr4 +	chrX	1958862	intron	Hr4 +	chrX	1962834	intron	Hr4 +	chrX_6_1955001	chrX_1955001	UG5N_1-HE
3050	chrX	2399836	2399871	chrX	2408190	2408193	roo	19	8349	5.0	0.5	2.8	5.0	8357	chrX	2399836	intergenic	not near genes	chrX	2404014	intergenic	not near genes	chrX	2408193	intergenic	not near genes	chrX_19_2400001	chrX_2400001	UG5N_1-HE
3055	chrX	2610382	2610407	chrX	2617500	2617513	HMS-Beagle	6	7116	1.0	1.5	1.2	2.7	7131	chrX	2610382	intergenic	CG8636 -	chrX	2613948	intergenic	not near genes	chrX	2617513	intergenic	Tsp3A -	chrX_6_2610001	chrX_2610001	UG5N_1-HE
3058	chrX	2844905	2844933	chrX	2852316	2852344	mdg1	12	7411	6.0	9.0	7.5	1.4	7439	chrX	2844905	intron	kirre +	chrX	2848624	intron	kirre +	chrX	2852344	intron	kirre +	chrX_12_2845001	chrX_2845001	UG5N_1-HE
3064	chrX	3075641	3075648	chrX	3080949	3080956	Transpac	5	5308	1.0	0.5	0.8	2.8	5315	chrX	3075641	intron	kirre +	chrX	3078298	intron	kirre +	chrX	3080956	intron	kirre +	chrX_5_3075001	chrX_3075001	UG5N_1-HE
3076	chrX	3415017	3415050	chrX	3421203	3421235	3S18	4	6186	2.0	5.0	3.5	0.9	6218	chrX	3415017	intron,intron	CR44999 +,CG12535 -	chrX	3418126	intron,intron	CR44999 +,CG12535 -	chrX	3421235	intron,intron	CR44999 +,CG12535 -	chrX_4_3415001	chrX_3415001	UG5N_1-HE
3078	chrX	3493089	3493123	chrX	3502249	3502283	roo	13	9160	1.5	3.0	2.2	4.1	9194	chrX	3493089	intron,intron	CR44999 +,Gas8 -	chrX	3497686	intron,intron	CR44999 +,Gas8 -	chrX	3502283	intron,intron	CR44999 +,Gas8 -	chrX_13_3495001	chrX_3495001	UG5N_1-HE
3082	chrX	3597548	3597582	chrX	3619717	3619751	roo	24	22168	8.5	6.5	7.5	2.8	22203	chrX	3597548	intron	AstA-R1 +	chrX	3608650	intron	AstA-R1 +	chrX	3619751	intron	AstA-R1 +	chrX_24_3605001	chrX_3605001	UG5N_1-HE
3087	chrX	3726758	3726797	chrX	3730155	3730195	NOF	23	3397	5.5	0.0	2.8	6.1	3437	chrX	3726758	intron	tlk +	chrX	3728476	intron	tlk +	chrX	3730195	intron	tlk +	chrX_23_3725001	chrX_3725001	UG5N_1-HE
3090	chrX	3842319	3842352	chrX	3842561	3842594	pogo	15	242	5.0	6.5	5.8	2.2	275	chrX	3842319	intron	ec +	chrX	3842456	intron	ec +	chrX	3842594	intron	ec +	chrX_15_3840001	chrX_3840001	UG5N_1-HE
3095	chrX	3986861	3986886	chrX	3994495	3994520	412	15	7634	7.5	0.0	3.8	3.1	7659	chrX	3986861	intergenic	not near genes	chrX	3990690	intergenic	not near genes	chrX	3994520	intergenic	not near genes	chrX_15_3990001	chrX_3990001	UG5N_1-HE
3098	chrX	4157885	4157919	chrX	4164933	4164955	297	22	7047	11.0	9.5	10.2	2.0	7070	chrX	4157885	intron	Fas2 -	chrX	4161420	intron	Fas2 -	chrX	4164955	intron	Fas2 -	chrX_22_4160001	chrX_4160001	UG5N_1-HE
3113	chrX	4700397	4700426	chrX	4700741	4700770	jockey	12	343	5.5	7.0	6.2	1.7	373	chrX	4700397	3` UTR	ctp +	chrX	4700584	3` UTR	ctp +	chrX	4700770	3` UTR	ctp +	chrX_12_4700001	chrX_4700001	UG5N_1-HE
3115	chrX	4731813	4731834	chrX	4736907	4736916	jockey	8	5092	10.0	6.0	8.0	0.9	5103	chrX	4731813	intergenic	not near genes	chrX	4734364	intergenic	not near genes	chrX	4736916	intergenic	not near genes	chrX_8_4730001	chrX_4730001	UG5N_1-HE
3119	chrX	4763249	4763253	chrX	4763738	4763742	Stalker4	4	489	11.5	4.0	7.8	0.5	493	chrX	4763249	intergenic	not near genes	chrX	4763496	intergenic	not near genes	chrX	4763742	intergenic	not near genes	chrX_4_4760001	chrX_4760001	UG5N_1-HE
3120	chrX	4763259	4763264	chrX	4763736	4763753	Stalker4	5	487	10.5	4.0	7.2	0.6	494	chrX	4763259	intergenic	not near genes	chrX	4763506	intergenic	not near genes	chrX	4763753	intergenic	not near genes	chrX_5_4760001	chrX_4760001	UG5N_1-HE
3124	chrX	4827965	4828001	chrX	4835337	4835373	Stalker4	32	7369	5.5	4.5	5.0	5.3	7408	chrX	4827965	intergenic	not near genes	chrX	4831669	intergenic	not near genes	chrX	4835373	intergenic	not near genes	chrX_32_4830001	chrX_4830001	UG5N_1-HE
3129	chrX	4990060	4990069	chrX	4997275	4997283	roo	6	7215	9.0	12.0	10.5	0.5	7223	chrX	4990060	intron	CR44833 -	chrX	4993672	intron	CR44833 -	chrX	4997283	intron	CR44833 -	chrX_6_4990001	chrX_4990001	UG5N_1-HE
3133	chrX	5096284	5096305	chrX	5103845	5103871	springer	10	7566	0.0	4.5	2.2	3.1	7587	chrX	5096284	intron,intron	CG15465 +,rg +	chrX	5100078	intron,intron	CG15465 +,rg +	chrX	5103871	intron,intron	CG15465 +,rg +	chrX_10_5100001	chrX_5100001	UG5N_1-HE
3139	chrX	5338708	5338733	chrX	5339961	5339987	jockey	9	1254	3.5	8.5	6.0	1.3	1279	chrX	5338708	intergenic	not near genes	chrX	5339348	intergenic	not near genes	chrX	5339987	intergenic	SK +	chrX_9_5335001	chrX_5335001	UG5N_1-HE
3142	chrX	5481064	5481068	chrX	5485033	5485036	I-element	5	3969	0.5	0.0	0.2	4.2	3972	chrX	5481064	intron	SPR +	chrX	5483050	intron	SPR +	chrX	5485036	intron	SPR +	chrX_5_5480001	chrX_5480001	UG5N_1-HE
3150	chrX	5883812	5883820	chrX	5884054	5884062	pogo	5	242	2.5	2.0	2.2	1.6	250	chrX	5883812	intron	CR45668 -	chrX	5883937	intron	CR45668 -	chrX	5884062	intron	CR45668 -	chrX_5_5880001	chrX_5880001	UG5N_1-HE
3151	chrX	5884164	5884193	chrX	5884406	5884435	pogo	4	242	0.0	3.0	1.5	1.6	271	chrX	5884164	intron	CR45668 -	chrX	5884300	intron	CR45668 -	chrX	5884435	intron	CR45668 -	chrX_4_5880001	chrX_5880001	UG5N_1-HE
3154	chrX	6171582	6171611	chrX	6179014	6179043	Quasimodo	18	7431	7.0	6.5	6.8	2.3	7461	chrX	6171582	intron	Ca-alpha1T -	chrX	6175312	intron	Ca-alpha1T -	chrX	6179043	intron	Ca-alpha1T -	chrX_18_6175001	chrX_6175001	UG5N_1-HE
3158	chrX	6335213	6335236	chrX	6337724	6337747	Tirant	11	2511	0.5	3.0	1.8	3.9	2534	chrX	6335213	intergenic	not near genes	chrX	6336480	intergenic	not near genes	chrX	6337747	intergenic	CG3842 +	chrX_11_6335001	chrX_6335001	UG5N_1-HE
3161	chrX	6392873	6392903	chrX	6397639	6397669	Doc	7	4766	2.5	4.5	3.5	1.6	4796	chrX	6392873	intergenic	not near genes	chrX	6395271	intergenic	not near genes	chrX	6397669	intergenic	not near genes	chrX_7_6395001	chrX_6395001	UG5N_1-HE
3162	chrX	6445318	6445333	chrX	6451077	6451092	297	11	5759	5.5	11.5	8.5	1.2	5774	chrX	6445318	intron	CG42340 -	chrX	6448205	intron	CG42340 -	chrX	6451092	intron	CG42340 -	chrX_11_6445001	chrX_6445001	UG5N_1-HE
3163	chrX	6562815	6562848	chrX	6571298	6571331	Tirant	14	8482	1.5	6.5	4.0	2.8	8516	chrX	6562815	intron	CG34417 +	chrX	6567073	intron	CG34417 +	chrX	6571331	intron	CG34417 +	chrX_14_6565001	chrX_6565001	UG5N_1-HE
3165	chrX	6605491	6605497	chrX	6608514	6608520	Burdock	4	3023	4.5	5.0	4.8	0.7	3029	chrX	6605491	intron	pigs +	chrX	6607006	intron	pigs +	chrX	6608520	intron	pigs +	chrX_4_6605001	chrX_6605001	UG5N_1-HE
3175	chrX	7023600	7023630	chrX	7030991	7031014	Tabor	11	7390	7.5	4.0	5.8	1.6	7414	chrX	7023600	intron	CG12541 -	chrX	7027307	intron	CG12541 -	chrX	7031014	intron	CG12541 -	chrX_11_7025001	chrX_7025001	UG5N_1-HE
3180	chrX	7125242	7125276	chrX	7134402	7134436	roo	24	9160	7.0	6.0	6.5	3.2	9194	chrX	7125242	intergenic	not near genes	chrX	7129839	intergenic	not near genes	chrX	7134436	intergenic	not near genes	chrX_24_7125001	chrX_7125001	UG5N_1-HE
3187	chrX	7702903	7702936	chrX	7703343	7703376	jockey	21	439	13.0	9.5	11.2	1.7	473	chrX	7702903	intron	CHES-1-like -	chrX	7703140	intron	CHES-1-like -	chrX	7703376	intron	CHES-1-like -	chrX_21_7700001	chrX_7700001	UG5N_1-HE
3189	chrX	7784235	7784238	chrX	7784538	7784541	jockey	4	303	0.5	6.5	3.5	0.9	306	chrX	7784235	intergenic	not near genes	chrX	7784388	intergenic	not near genes	chrX	7784541	intergenic	not near genes	chrX_4_7780001	chrX_7780001	UG5N_1-HE
3192	chrX	8031426	8031461	chrX	8035736	8035771	Juan	13	4308	6.5	10.0	8.2	1.4	4345	chrX	8031426	intergenic	not near genes	chrX	8033598	intergenic	not near genes	chrX	8035771	3` UTR	CG2233 -	chrX_13_8030001	chrX_8030001	UG5N_1-HE
3197	chrX	8364835	8364864	chrX	8365240	8365269	BS	15	405	6.0	7.5	6.8	1.9	434	chrX	8364835	intron	nAChRalpha3 -	chrX	8365052	intron	nAChRalpha3 -	chrX	8365269	intron	nAChRalpha3 -	chrX_15_8365001	chrX_8365001	UG5N_1-HE
3215	chrX	8922326	8922363	chrX	8922761	8922798	jockey	34	434	6.5	9.0	7.8	3.9	472	chrX	8922326	intron	rdgA +	chrX	8922562	intron	rdgA +	chrX	8922798	intron	rdgA +	chrX_34_8920001	chrX_8920001	UG5N_1-HE
3216	chrX	8927585	8927614	chrX	8929856	8929885	NOF	13	2271	2.5	4.0	3.2	3.1	2300	chrX	8927585	intron	rdgA +	chrX	8928735	intron	rdgA +	chrX	8929885	intron	rdgA +	chrX_13_8925001	chrX_8925001	UG5N_1-HE
3217	chrX	8948756	8948788	chrX	8956267	8956299	roo	18	7511	4.5	4.0	4.2	3.5	7543	chrX	8948756	intron	rdgA +	chrX	8952528	intron	rdgA +	chrX	8956299	intron	rdgA +	chrX_18_8950001	chrX_8950001	UG5N_1-HE
3234	chrX	9508146	9508166	chrX	9509665	9509685	jockey	15	1518	6.0	6.0	6.0	2.1	1539	chrX	9508146	intron	CG32700 -	chrX	9508916	intron	CG32700 -	chrX	9509685	intron	CG32700 -	chrX_15_9505001	chrX_9505001	UG5N_1-HE
3236	chrX	9575797	9575824	chrX	9576114	9576149	mdg3	13	324	3.5	4.0	3.8	2.7	352	chrX	9575797	intron,exon	CG32699 -,CG42395 -	chrX	9575973	intron,intron	CG32699 -,CG42395 -	chrX	9576149	intron,5` UTR	CG32699 -,CG42395 -	chrX_13_9575001	chrX_9575001	UG5N_1-HE
3247	chrX	10138214	10138248	chrX	10145719	10145753	412	9	7505	11.0	1.5	6.2	1.2	7539	chrX	10138214	intron,intron	RhoU +,CR44894 -	chrX	10141984	intron,intron	RhoU +,CR44894 -	chrX	10145753	intron,intron	RhoU +,CR44894 -	chrX_9_10140001	chrX_10140001	UG5N_1-HE
3253	chrX	10267300	10267328	chrX	10276451	10276479	roo	14	9151	3.5	5.5	4.5	2.5	9179	chrX	10267300	3` UTR	alpha-Man-I -	chrX	10271890	intron	alpha-Man-I -	chrX	10276479	3` UTR	alpha-Man-I -	chrX_14_10270001	chrX_10270001	UG5N_1-HE
3262	chrX	10550853	10550886	chrX	10552321	10552354	hobo	13	1468	6.5	6.5	6.5	1.7	1501	chrX	10550853	intron	spri -	chrX	10551604	intron	spri -	chrX	10552354	intron	spri -	chrX_13_10550001	chrX_10550001	UG5N_1-HE
3265	chrX	10686047	10686069	chrX	10691185	10691207	roo	18	5138	6.5	8.5	7.5	2.1	5160	chrX	10686047	intron	X11Lbeta +	chrX	10688627	intron	X11Lbeta +	chrX	10691207	intron	X11Lbeta +	chrX_18_10685001	chrX_10685001	UG5N_1-HE
3266	chrX	10772686	10772694	chrX	10772770	10772778	Tirant	4	84	3.5	1.5	2.5	1.1	92	chrX	10772686	intron	CG15211 +	chrX	10772732	intron	CG15211 +	chrX	10772778	intron	CG15211 +	chrX_4_10770001	chrX_10770001	UG5N_1-HE
3273	chrX	11184251	11184278	chrX	11189328	11189355	flea	6	5077	8.5	7.0	7.8	0.7	5104	chrX	11184251	intergenic	not near genes	chrX	11186803	intergenic	not near genes	chrX	11189355	intergenic	not near genes	chrX_6_11185001	chrX_11185001	UG5N_1-HE
3275	chrX	11194451	11194461	chrX	11201872	11201883	gypsy5	4	7422	0.0	7.5	3.8	0.8	7432	chrX	11194451	intergenic	not near genes	chrX	11198167	intergenic	not near genes	chrX	11201883	intergenic	CG11106 +	chrX_4_11195001	chrX_11195001	UG5N_1-HE
3278	chrX	11268560	11268596	chrX	11270053	11270090	hopper2	15	1493	4.0	7.5	5.8	2.2	1530	chrX	11268560	intron	CG44422 -	chrX	11269325	intron	CG44422 -	chrX	11270090	intron	CG44422 -	chrX_15_11265001	chrX_11265001	UG5N_1-HE
3280	chrX	11312065	11312092	chrX	11319419	11319434	Stalker2	5	7347	1.0	3.0	2.0	1.7	7369	chrX	11312065	intergenic	not near genes	chrX	11315750	intergenic	not near genes	chrX	11319434	intergenic	not near genes	chrX_5_11315001	chrX_11315001	UG5N_1-HE
3286	chrX	11571452	11571480	chrX	11571694	11571722	pogo	12	242	5.0	5.0	5.0	2.0	270	chrX	11571452	3` UTR	Kmn1 -	chrX	11571587	3` UTR	Kmn1 -	chrX	11571722	3` UTR	Kmn1 -	chrX_12_11570001	chrX_11570001	UG5N_1-HE
3288	chrX	11633414	11633445	chrX	11640469	11640500	297	23	7055	7.0	10.0	8.5	2.4	7086	chrX	11633414	intron	Ptp10D +	chrX	11636957	intron	Ptp10D +	chrX	11640500	intron	Ptp10D +	chrX_23_11635001	chrX_11635001	UG5N_1-HE
3289	chrX	11645105	11645146	chrX	11648276	11648317	NOF	23	3171	6.0	8.5	7.2	2.8	3212	chrX	11645105	intron	Ptp10D +	chrX	11646711	intron	Ptp10D +	chrX	11648317	intron	Ptp10D +	chrX_23_11645001	chrX_11645001	UG5N_1-HE
3293	chrX	11989265	11989267	chrX	12778159	12778161	flea	4	788894	13.5	32.5	23.0	0.2	788896	chrX	11989265	intergenic	tsg -	chrX	12383713	intergenic	not near genes	chrX	12778161	intron	CG32647 -	chrX_4_12380001	chrX_12380001	UG5N_1-HE
3298	chrX	12168132	12168159	chrX	12173575	12173602	I-element	12	5443	8.5	8.0	8.2	1.3	5470	chrX	12168132	intron	Ten-a +	chrX	12170867	intron	Ten-a +	chrX	12173602	intron	Ten-a +	chrX_12_12170001	chrX_12170001	UG5N_1-HE
3304	chrX	12301965	12301989	chrX	12303272	12303296	X-element	5	1307	2.5	3.0	2.8	1.3	1331	chrX	12301965	intron	Ten-a +	chrX	12302630	intron	Ten-a +	chrX	12303296	intron	Ten-a +	chrX_5_12300001	chrX_12300001	UG5N_1-HE
3307	chrX	12381894	12381903	chrX	12385797	12385798	flea	6	3902	0.0	10.0	5.0	1.0	3904	chrX	12381894	intergenic	not near genes	chrX	12383846	intergenic	not near genes	chrX	12385798	intergenic	not near genes	chrX_6_12380001	chrX_12380001	UG5N_1-HE
3327	chrX	12930597	12930608	chrX	12937714	12937725	HMS-Beagle	4	7117	7.0	15.0	11.0	0.3	7128	chrX	12930597	intron	fne +	chrX	12934161	intron	fne +	chrX	12937725	intron	fne +	chrX_4_12930001	chrX_12930001	UG5N_1-HE
3344	chrX	13401481	13401522	chrX	13401834	13401875	jockey	5	353	0.5	3.0	1.8	1.8	394	chrX	13401481	intergenic	CG1673 +,CG12725 -	chrX	13401678	intergenic	CG12725 -,CG1673 +	chrX	13401875	3` UTR	CG12725 -	chrX_5_13400001	chrX_13400001	UG5N_1-HE
3345	chrX	13403022	13403041	chrX	13403150	13403169	X-element	5	127	5.5	2.0	3.8	1.0	147	chrX	13403022	intergenic	CG12725 -	chrX	13403096	intergenic	CG12725 -	chrX	13403169	intergenic	CG12725 -	chrX_5_13400001	chrX_13400001	UG5N_1-HE
3346	chrX	13429475	13429495	chrX	13430625	13430645	jockey	7	1150	2.0	9.0	5.5	1.1	1170	chrX	13429475	intergenic	not near genes	chrX	13430060	intergenic	not near genes	chrX	13430645	intergenic	not near genes	chrX_7_13430001	chrX_13430001	UG5N_1-HE
3347	chrX	13463642	13463675	chrX	13469220	13469253	mdg3	13	5578	3.5	3.5	3.5	2.9	5611	chrX	13463642	intron	Neto +	chrX	13466448	intron	Neto +	chrX	13469253	intron	Neto +	chrX_13_13465001	chrX_13465001	UG5N_1-HE
3360	chrX	14030776	14030784	chrX	14035358	14035372	copia	5	4586	0.0	6.5	3.2	1.2	4596	chrX	14030776	intergenic	not near genes	chrX	14033074	intergenic	not near genes	chrX	14035372	intergenic	not near genes	chrX_5_14030001	chrX_14030001	UG5N_1-HE
3362	chrX	14105024	14105056	chrX	14114176	14114208	roo	19	9151	5.5	7.5	6.5	2.5	9184	chrX	14105024	intergenic	not near genes	chrX	14109616	intergenic	not near genes	chrX	14114208	5` UTR	CR44657 +	chrX_19_14105001	chrX_14105001	UG5N_1-HE
3369	chrX	14416302	14416341	chrX	14421071	14421109	F-element	13	4768	5.0	6.0	5.5	2.0	4807	chrX	14416302	intron	dpr8 +	chrX	14418706	intron	dpr8 +	chrX	14421109	intron	dpr8 +	chrX_13_14415001	chrX_14415001	UG5N_1-HE
3375	chrX	14589686	14589704	chrX	14589928	14589946	pogo	9	242	2.0	1.0	1.5	3.6	260	chrX	14589686	intron	CG9413 -	chrX	14589816	intron	CG9413 -	chrX	14589946	intron	CG9413 -	chrX_9_14585001	chrX_14585001	UG5N_1-HE
3377	chrX	14636457	14636496	chrX	14641899	14641938	I-element	16	5442	9.0	3.0	6.0	2.3	5481	chrX	14636457	intron	NetA -	chrX	14639198	intron	NetA -	chrX	14641938	intron	NetA -	chrX_16_14635001	chrX_14635001	UG5N_1-HE
3379	chrX	14778025	14778061	chrX	14782823	14782859	Doc	11	4798	5.5	4.5	5.0	1.8	4834	chrX	14778025	intergenic	CG5347 +	chrX	14780442	intergenic	not near genes	chrX	14782859	intergenic	Ag5r2 -	chrX_11_14780001	chrX_14780001	UG5N_1-HE
3383	chrX	14818761	14818786	chrX	14823966	14823990	copia	6	5205	5.5	4.5	5.0	1.0	5229	chrX	14818761	intron	rut -	chrX	14821376	intron	rut -	chrX	14823990	intron	rut -	chrX_6_14820001	chrX_14820001	UG5N_1-HE
3389	chrX	14936851	14936883	chrX	14946119	14946141	roo	8	9260	1.5	7.0	4.2	1.5	9290	chrX	14936851	intron	pdgy -	chrX	14941496	intron	pdgy -	chrX	14946141	intron	pdgy -	chrX_8_14940001	chrX_14940001	UG5N_1-HE
3400	chrX	15273708	15273730	chrX	15274876	15274898	1360	11	1168	6.5	10.0	8.2	1.2	1190	chrX	15273708	intergenic	not near genes	chrX	15274303	intergenic	not near genes	chrX	15274898	intergenic	not near genes	chrX_11_15270001	chrX_15270001	UG5N_1-HE
3404	chrX	15413047	15413086	chrX	15417350	15417388	Juan	21	4303	7.5	1.0	4.2	4.0	4341	chrX	15413047	intron	Cngl -	chrX	15415218	intron	Cngl -	chrX	15417388	intron	Cngl -	chrX_21_15415001	chrX_15415001	UG5N_1-HE
3405	chrX	15421918	15421952	chrX	15423430	15423464	pogo	23	1511	5.5	5.0	5.2	3.7	1546	chrX	15421918	intron	Cngl -	chrX	15422691	intron	Cngl -	chrX	15423464	intron	Cngl -	chrX_23_15420001	chrX_15420001	UG5N_1-HE
3407	chrX	15435687	15435704	chrX	15436121	15436138	rover	21	434	6.5	22.0	14.2	1.4	451	chrX	15435687	intron	Cngl -	chrX	15435912	intron	Cngl -	chrX	15436138	intron	Cngl -	chrX_21_15435001	chrX_15435001	UG5N_1-HE
3424	chrX	16245952	16245963	chrX	16246060	16246071	INE-1	9	108	9.0	3.5	6.2	1.2	119	chrX	16245952	intergenic	not near genes	chrX	16246012	intergenic	not near genes	chrX	16246071	intergenic	not near genes	chrX_9_16245001	chrX_16245001	UG5N_1-HE
3427	chrX	16340689	16340701	chrX	16349847	16349859	roo	6	9158	1.5	7.5	4.5	1.1	9170	chrX	16340689	intergenic	Dsp1 +	chrX	16345274	intergenic	not near genes	chrX	16349859	intergenic	sl +	chrX_6_16345001	chrX_16345001	UG5N_1-HE
3429	chrX	16492645	16492662	chrX	16498223	16498240	mdg3	12	5578	17.0	9.0	13.0	0.9	5595	chrX	16492645	intron	para -	chrX	16495442	intron	para -	chrX	16498240	intron	para -	chrX_12_16495001	chrX_16495001	UG5N_1-HE
3430	chrX	16492665	16492679	chrX	16498222	16498257	mdg3	15	5576	10.0	9.0	9.5	1.4	5592	chrX	16492665	intron	para -	chrX	16495461	intron	para -	chrX	16498257	intron	para -	chrX_15_16495001	chrX_16495001	UG5N_1-HE
3442	chrX	16936015	16936040	chrX	16936434	16936446	jockey	5	416	0.0	3.5	1.8	1.8	431	chrX	16936015	intron	CG4928 +	chrX	16936230	intron	CG4928 +	chrX	16936446	intron	CG4928 +	chrX_5_16935001	chrX_16935001	UG5N_1-HE
3451	chrX	17195212	17195236	chrX	17200298	17200322	flea	8	5086	6.0	4.0	5.0	1.3	5110	chrX	17195212	3` UTR	baz +	chrX	17197767	3` UTR	baz +	chrX	17200322	3` UTR	baz +	chrX_8_17195001	chrX_17195001	UG5N_1-HE
3470	chrX	17556943	17556966	chrX	17557443	17557458	mdg1	5	495	5.0	7.5	6.2	0.7	515	chrX	17556943	intron	CG43658 -	chrX	17557200	intron	CG43658 -	chrX	17557458	intron	CG43658 -	chrX_5_17555001	chrX_17555001	UG5N_1-HE
3475	chrX	17792962	17792983	chrX	17796259	17796281	flea	12	3298	3.5	7.5	5.5	1.8	3319	chrX	17792962	intron	OdsH +	chrX	17794622	intron	OdsH +	chrX	17796281	intron	OdsH +	chrX_12_17790001	chrX_17790001	UG5N_1-HE
3494	chrX	18429493	18429525	chrX	18434805	18434837	Transpac	9	5312	7.0	4.5	5.8	1.3	5344	chrX	18429493	intergenic	not near genes	chrX	18432165	intergenic	not near genes	chrX	18434837	intergenic	not near genes	chrX_9_18430001	chrX_18430001	UG5N_1-HE
3510	chrX	19060407	19060436	chrX	19065192	19065218	Doc	15	4785	7.5	4.5	6.0	2.1	4811	chrX	19060407	intron	CG14190 +	chrX	19062812	intron	CG14190 +	chrX	19065218	intron	CG14190 +	chrX_15_19060001	chrX_19060001	UG5N_1-HE
3515	chrX	19136559	19136584	chrX	19143479	19143504	412	6	6919	2.5	6.5	4.5	1.1	6945	chrX	19136559	intergenic	not near genes	chrX	19140032	intergenic	not near genes	chrX	19143504	3` UTR	RhoGAP18B -	chrX_6_19140001	chrX_19140001	UG5N_1-HE
3525	chrX	19356990	19357017	chrX	19358432	19358459	NOF	14	1442	4.0	11.0	7.5	1.6	1469	chrX	19356990	intron	kek5 +	chrX	19357724	intron	kek5 +	chrX	19358459	intron	kek5 +	chrX_14_19355001	chrX_19355001	UG5N_1-HE
3527	chrX	19380154	19380186	chrX	19380396	19380429	pogo	9	243	5.0	5.0	5.0	1.5	275	chrX	19380154	intron	kek5 +	chrX	19380292	intron	kek5 +	chrX	19380429	intron	kek5 +	chrX_9_19380001	chrX_19380001	UG5N_1-HE
3530	chrX	19472137	19472154	chrX	19472708	19472725	jockey	6	570	1.5	4.5	3.0	1.5	588	chrX	19472137	intergenic	kek5 +	chrX	19472431	intergenic	not near genes	chrX	19472725	intergenic	not near genes	chrX_6_19470001	chrX_19470001	UG5N_1-HE
3537	chrX	19710073	19710099	chrX	19711860	19711886	S-element	17	1787	4.5	3.5	4.0	3.4	1813	chrX	19710073	intron	meso18E -	chrX	19710980	intron	meso18E -	chrX	19711886	intron	meso18E -	chrX_17_19710001	chrX_19710001	UG5N_1-HE
3540	chrX	19812739	19812763	chrX	19816028	19816052	Gypsy12A_LTR	12	3289	48.0	25.5	36.8	0.3	3313	chrX	19812739	5` UTR	skpD +	chrX	19814396	intergenic	not near genes	chrX	19816052	intergenic	skpC +	chrX_12_19810001	chrX_19810001	UG5N_1-HE
3571	chrX	20377325	20377347	chrX	20378793	20378815	hobo	9	1468	0.0	3.5	1.8	3.2	1490	chrX	20377325	intergenic	not near genes	chrX	20378070	intergenic	not near genes	chrX	20378815	intergenic	not near genes	chrX_9_20375001	chrX_20375001	UG5N_1-HE
3573	chrX	20504136	20504148	chrX	20505658	20505670	transib2	9	1522	12.5	6.5	9.5	0.9	1534	chrX	20504136	intron	RhoGAP19D -	chrX	20504903	intron	RhoGAP19D -	chrX	20505670	intron	RhoGAP19D -	chrX_9_20500001	chrX_20500001	UG5N_1-HE
3574	chrX	20504152	20504157	chrX	20505645	20505679	transib2	6	1517	10.0	4.0	7.0	0.8	1527	chrX	20504152	intron	RhoGAP19D -	chrX	20504916	intron	RhoGAP19D -	chrX	20505679	intron	RhoGAP19D -	chrX_6_20500001	chrX_20500001	UG5N_1-HE
3587	chrX	20836725	20836752	chrX	20844328	20844355	roo	5	7603	2.5	0.0	1.2	2.3	7630	chrX	20836725	intron	shakB -	chrX	20840540	intron	shakB -	chrX	20844355	intron	shakB -	chrX_5_20840001	chrX_20840001	UG5N_1-HE
3591	chrX	20940716	20940756	chrX	20942186	20942226	hobo	19	1469	4.5	6.5	5.5	2.9	1510	chrX	20940716	intergenic	not near genes	chrX	20941471	intergenic	not near genes	chrX	20942226	intergenic	not near genes	chrX_19_20940001	chrX_20940001	UG5N_1-HE
3594	chrX	20956985	20957013	chrX	20962428	20962456	I-element	10	5443	7.5	7.0	7.2	1.2	5471	chrX	20956985	intergenic	not near genes	chrX	20959720	intergenic	not near genes	chrX	20962456	intergenic	Ser6 -	chrX_10_20955001	chrX_20955001	UG5N_1-HE
3599	chrX	21061863	21061897	chrX	21062349	21062383	roo	14	486	8.0	4.5	6.2	1.9	520	chrX	21061863	intron	bves +	chrX	21062123	intron	bves +	chrX	21062383	intron,3` UTR	bves +,CG32512 -	chrX_14_21060001	chrX_21060001	UG5N_1-HE
3601	chrX	21086127	21086166	chrX	21087157	21087196	jockey	28	1028	5.0	5.0	5.0	4.7	1069	chrX	21086127	intergenic	not near genes	chrX	21086662	intergenic	not near genes	chrX	21087196	intergenic	not near genes	chrX_28_21085001	chrX_21085001	UG5N_1-HE
3609	chrX	21254700	21254735	chrX	21255287	21255322	hopper2	25	586	6.5	8.5	7.5	2.9	622	chrX	21254700	intron	CG32521 -	chrX	21255011	intron	CG32521 -	chrX	21255322	intron	CG32521 -	chrX_25_21255001	chrX_21255001	UG5N_1-HE
3619	chrX	21458688	21458730	chrX	21464125	21464167	Ivk	19	5437	4.5	6.5	5.5	2.9	5479	chrX	21458688	intergenic	not near genes	chrX	21461428	intergenic	not near genes	chrX	21464167	intergenic	not near genes	chrX_19_21460001	chrX_21460001	UG5N_1-HE
3620	chrX	21474403	21474435	chrX	21474770	21474802	1731	15	367	4.5	4.5	4.5	2.7	399	chrX	21474403	intergenic	not near genes	chrX	21474602	intergenic	not near genes	chrX	21474802	intergenic	not near genes	chrX_15_21470001	chrX_21470001	UG5N_1-HE
3627	chrX	22522636	22522658	chrX	22525457	22525479	NOF	7	2821	2.0	2.0	2.0	2.3	2843	chrX	22522636	intron	CG17600 +	chrX	22524058	intron	CG17600 +	chrX	22525479	intron	CG17600 +	chrX_7_22520001	chrX_22520001	UG5N_1-HE
3638	chrX	22681480	22681515	chrX	22688939	22688973	HMS-Beagle2	21	7458	3.0	14.5	8.8	2.1	7493	chrX	22681480	intron	CR44997 +	chrX	22685226	intron	CR44997 +	chrX	22688973	intron	CR44997 +	chrX_21_22685001	chrX_22685001	UG5N_1-HE
3639	chrX	22697499	22697531	chrX	22701797	22701829	Juan	15	4298	9.0	10.5	9.8	1.4	4330	chrX	22697499	intron	CR44997 +	chrX	22699664	intron	CR44997 +	chrX	22701829	intron	CR44997 +	chrX_15_22695001	chrX_22695001	UG5N_1-HE
3640	chrX	22771510	22771533	chrX	22774802	22774825	297	9	3292	4.5	5.0	4.8	1.6	3315	chrX	22771510	intron	CR44997 +	chrX	22773168	intron	CR44997 +	chrX	22774825	intron	CR44997 +	chrX_9_22770001	chrX_22770001	UG5N_1-HE
3641	chrX	22811990	22812004	chrX	22816764	22816776	F-element	7	4774	15.0	7.0	11.0	0.6	4786	chrX	22811990	intergenic	CG12446 -	chrX	22814383	intergenic	not near genes	chrX	22816776	intergenic	not near genes	chrX_7_22810001	chrX_22810001	UG5N_1-HE
3647	chrX	22967389	22967512	chrX	23154541	23154690	diver	8	187158	5.5	16.5	11.0	0.7	187301	chrX	22967389	intergenic	not near genes	chrX	23061040	intergenic	not near genes	chrX	23154690	intergenic	not near genes	chrX_8_23060001	chrX_23060001	UG5N_1-HE
3648	chrX	22987101	22987126	chrX	22989762	22989786	Burdock	11	2660	2.5	1.0	1.8	3.9	2685	chrX	22987101	intron,intron	stnA -,stnB -	chrX	22988444	intron,intron	stnA -,stnB -	chrX	22989786	intron,intron	stnA -,stnB -	chrX_11_22985001	chrX_22985001	UG5N_1-HE
3650	chrX	22996324	22996338	chrX	23003557	23003571	roo	4	7233	1.5	5.0	3.2	1.0	7247	chrX	22996324	intron,intron	stnA -,stnB -	chrX	22999948	intron,intron	stnA -,stnB -	chrX	23003571	intron,intron	stnA -,stnB -	chrX_4_22995001	chrX_22995001	UG5N_1-HE
3651	chrX	23036387	23036409	chrX	23037789	23037811	pogo	7	1402	1.0	2.5	1.8	2.5	1424	chrX	23036387	intron	CG12061 +	chrX	23037099	intron	CG12061 +	chrX	23037811	intron	CG12061 +	chrX_7_23035001	chrX_23035001	UG5N_1-HE