SV#	Chr_5p	Chr_coord_5p_start	Chr_coord_5p_end	Chr_3p	Chr_coord_3p_start	Chr_coord_3p_end	repName	Reads_collapsed	avg_del_len	RefGen_3prime	Refgen_5prime	RefGen_Avg	Coverage_Ratio	size	Chr_5p	Chr_coord_5p	classification_5p	comment_5p	Chr_mid	Chr_coord_mid	classification_mid	comment_mid	Chr_3p	Chr_coord_3p	classification_3p	comment_3p	depletion_code	loci_code	libname
2	chr2L	47442	47480	chr2L	52573	52611	jockey	12	5131	5.0	7.0	6.0	1.7	5169	chr2L	47442	intron	Cda5 -	chr2L	50026	intron	Cda5 -	chr2L	52611	intron	Cda5 -	chr2L_12_50001	chr2L_50001	SF447_1-HE
7	chr2L	347871	347910	chr2L	355397	355434	blood	6	7526	4.5	1.5	3.0	1.5	7563	chr2L	347871	3` UTR	Plc21C +	chr2L	351652	intron	Plc21C +	chr2L	355434	3` UTR	Plc21C +	chr2L_6_350001	chr2L_350001	SF447_1-HE
12	chr2L	686917	686946	chr2L	695979	696012	roo	7	9065	3.0	2.5	2.8	1.8	9095	chr2L	686917	intron	ds -	chr2L	691464	intron	ds -	chr2L	696012	intron	ds -	chr2L_7_690001	chr2L_690001	SF447_1-HE
15	chr2L	770442	770481	chr2L	772249	772288	Bari1	6	1805	4.5	2.5	3.5	1.3	1846	chr2L	770442	intergenic	not near genes	chr2L	771365	intergenic	not near genes	chr2L	772288	intergenic	CR44614 +	chr2L_6_770001	chr2L_770001	SF447_1-HE
19	chr2L	976860	976910	chr2L	984522	984572	roo	9	7662	2.5	3.0	2.8	2.4	7712	chr2L	976860	intergenic	not near genes	chr2L	980716	intergenic	not near genes	chr2L	984572	intergenic	not near genes	chr2L_9_980001	chr2L_980001	SF447_1-HE
20	chr2L	996705	996720	chr2L	1005826	1005841	roo	5	9121	7.5	1.5	4.5	0.9	9136	chr2L	996705	intergenic	not near genes	chr2L	1001273	intergenic	not near genes	chr2L	1005841	intergenic	not near genes	chr2L_5_1000001	chr2L_1000001	SF447_1-HE
27	chr2L	1220125	1220157	chr2L	1227616	1227648	blood	8	7491	3.5	2.5	3.0	2.0	7523	chr2L	1220125	intron	CG42329 +	chr2L	1223886	intron	CG42329 +	chr2L	1227648	intron	CG42329 +	chr2L_8_1220001	chr2L_1220001	SF447_1-HE
38	chr2L	1570668	1570689	chr2L	1573566	1573587	F-element	11	2898	14.5	10.0	12.2	0.8	2919	chr2L	1570668	intron	haf +	chr2L	1572128	intron	haf +	chr2L	1573587	intron	haf +	chr2L_11_1570001	chr2L_1570001	SF447_1-HE
39	chr2L	1570690	1570717	chr2L	1573556	1573615	F-element	15	2895	8.5	7.0	7.8	1.7	2925	chr2L	1570690	intron	haf +	chr2L	1572152	intron	haf +	chr2L	1573615	intron	haf +	chr2L_15_1570001	chr2L_1570001	SF447_1-HE
42	chr2L	1678959	1679002	chr2L	1686446	1686493	blood	8	7490	1.0	2.5	1.8	2.9	7534	chr2L	1678959	intron	chinmo +	chr2L	1682726	intron	chinmo +	chr2L	1686493	intron	chinmo +	chr2L_8_1680001	chr2L_1680001	SF447_1-HE
43	chr2L	1711334	1711385	chr2L	1711684	1711735	mdg3	4	350	2.5	2.5	2.5	1.1	401	chr2L	1711334	3` UTR,3` UTR	mRpL48 +,frtz -	chr2L	1711534	3` UTR	frtz -	chr2L	1711735	3` UTR	frtz -	chr2L_4_1710001	chr2L_1710001	SF447_1-HE
54	chr2L	2100384	2100400	chr2L	2109549	2109577	roo	5	9165	8.5	13.0	10.8	0.4	9193	chr2L	2100384	intron	dpr3 -	chr2L	2104980	intron	dpr3 -	chr2L	2109577	intron	dpr3 -	chr2L_5_2100001	chr2L_2100001	SF447_1-HE
55	chr2L	2112085	2112115	chr2L	2119773	2119803	opus	9	7686	5.0	3.5	4.2	1.7	7718	chr2L	2112085	intergenic	not near genes	chr2L	2115944	intergenic	not near genes	chr2L	2119803	intergenic	not near genes	chr2L_9_2115001	chr2L_2115001	SF447_1-HE
68	chr2L	2661223	2661225	chr2L	2663032	2663089	I-element	6	1846	3.0	5.5	4.2	1.2	1866	chr2L	2661223	intergenic	not near genes	chr2L	2662156	intergenic	not near genes	chr2L	2663089	intergenic	not near genes	chr2L_6_2660001	chr2L_2660001	SF447_1-HE
78	chr2L	2933261	2933299	chr2L	2935478	2935516	pogo	15	2217	8.0	9.0	8.5	1.6	2255	chr2L	2933261	intron	lilli +	chr2L	2934388	intron	lilli +	chr2L	2935516	intron	lilli +	chr2L_15_2930001	chr2L_2930001	SF447_1-HE
81	chr2L	3073017	3073046	chr2L	3078245	3078273	copia	8	5228	2.5	1.5	2.0	2.7	5256	chr2L	3073017	intron	toc -	chr2L	3075645	intron	toc -	chr2L	3078273	intron	toc -	chr2L_8_3075001	chr2L_3075001	SF447_1-HE
85	chr2L	3251470	3251518	chr2L	3259061	3259109	springer	7	7590	1.5	4.5	3.0	1.8	7639	chr2L	3251470	intergenic	not near genes	chr2L	3255290	intergenic	not near genes	chr2L	3259109	intergenic	not near genes	chr2L_7_3255001	chr2L_3255001	SF447_1-HE
87	chr2L	3388586	3388622	chr2L	3388852	3388879	pogo	9	264	2.5	2.5	2.5	2.6	293	chr2L	3388586	intergenic	CG42460 -	chr2L	3388732	intergenic	CG42460 -	chr2L	3388879	intergenic	CG42460 -,CR44791 +	chr2L_9_3385001	chr2L_3385001	SF447_1-HE
98	chr2L	3649759	3649800	chr2L	3654992	3655028	copia	5	5228	0.0	1.0	0.5	3.3	5269	chr2L	3649759	intron	for -	chr2L	3652394	intron	for -	chr2L	3655028	intron	for -	chr2L_5_3650001	chr2L_3650001	SF447_1-HE
111	chr2L	4066020	4066064	chr2L	4068865	4068914	Juan	15	2848	5.5	2.0	3.8	3.1	2894	chr2L	4066020	intron	ed +	chr2L	4067467	intron	ed +	chr2L	4068914	intron	ed +	chr2L_15_4065001	chr2L_4065001	SF447_1-HE
117	chr2L	4601683	4601731	chr2L	4609150	4609198	mdg1	9	7467	2.5	2.0	2.2	2.8	7515	chr2L	4601683	intron	dp -	chr2L	4605440	intron	dp -	chr2L	4609198	intron	dp -	chr2L_9_4605001	chr2L_4605001	SF447_1-HE
120	chr2L	4661822	4661855	chr2L	4669428	4669461	opus	5	7606	0.5	3.0	1.8	1.8	7639	chr2L	4661822	intergenic	not near genes	chr2L	4665642	intergenic	not near genes	chr2L	4669461	intergenic	not near genes	chr2L_5_4665001	chr2L_4665001	SF447_1-HE
123	chr2L	4918156	4918195	chr2L	4923255	4923332	jockey	4	5128	2.0	0.0	1.0	2.0	5176	chr2L	4918156	intron	hoe1 -	chr2L	4920744	intron	hoe1 -	chr2L	4923332	intron	hoe1 -	chr2L_4_4920001	chr2L_4920001	SF447_1-HE
134	chr2L	5827690	5827713	chr2L	5836724	5836747	roo	7	9034	4.5	3.0	3.8	1.5	9057	chr2L	5827690	intron	TrissinR +	chr2L	5832218	intron	TrissinR +	chr2L	5836747	intron	TrissinR +	chr2L_7_5830001	chr2L_5830001	SF447_1-HE
155	chr2L	6876754	6876810	chr2L	6882971	6883025	diver	13	6214	1.5	5.5	3.5	2.9	6271	chr2L	6876754	intron	Nlg2 +	chr2L	6879890	intron	Nlg2 +	chr2L	6883025	intron	Nlg2 +	chr2L_13_6875001	chr2L_6875001	SF447_1-HE
168	chr2L	7343310	7343358	chr2L	7350441	7350499	roo	15	7139	6.5	6.0	6.2	2.1	7189	chr2L	7343310	intron	Wnt6 +	chr2L	7346904	intron	Wnt6 +	chr2L	7350499	intron	Wnt6 +	chr2L_15_7345001	chr2L_7345001	SF447_1-HE
176	chr2L	7548102	7548106	chr2L	7550568	7550572	Burdock	4	2466	0.5	3.5	2.0	1.3	2470	chr2L	7548102	intron	RapGAP1 -	chr2L	7549337	intron	RapGAP1 -	chr2L	7550572	intron	RapGAP1 -	chr2L_4_7545001	chr2L_7545001	SF447_1-HE
177	chr2L	7579177	7579208	chr2L	7579394	7579425	BS	4	217	3.0	0.5	1.8	1.4	248	chr2L	7579177	intergenic	RapGAP1 -	chr2L	7579301	intergenic	RapGAP1 -	chr2L	7579425	intergenic	RapGAP1 -	chr2L_4_7575001	chr2L_7575001	SF447_1-HE
184	chr2L	7977075	7977111	chr2L	7984076	7984112	297	4	7000	3.5	6.0	4.8	0.7	7037	chr2L	7977075	intron	Snoo -	chr2L	7980594	intron	Snoo -	chr2L	7984112	intron,5` UTR	Snoo -,CG7231 +	chr2L_4_7980001	chr2L_7980001	SF447_1-HE
191	chr2L	8452175	8452227	chr2L	8462002	8462054	roo	11	9826	3.0	1.5	2.2	3.4	9879	chr2L	8452175	intron	fu12 -	chr2L	8457114	intron	fu12 -	chr2L	8462054	intron	fu12 -	chr2L_11_8455001	chr2L_8455001	SF447_1-HE
201	chr2L	8723101	8723143	chr2L	8731499	8731546	Tirant	9	8402	2.0	2.0	2.0	3.0	8445	chr2L	8723101	intron	raw -	chr2L	8727324	intron	raw -	chr2L	8731546	intron	raw -	chr2L_9_8725001	chr2L_8725001	SF447_1-HE
207	chr2L	9000261	9000294	chr2L	9007797	9007830	roo	7	7536	5.5	0.0	2.8	1.8	7569	chr2L	9000261	intergenic	Try29F +	chr2L	9004046	intergenic	not near genes	chr2L	9007830	intergenic	not near genes	chr2L_7_9000001	chr2L_9000001	SF447_1-HE
216	chr2L	9217951	9217998	chr2L	9222761	9222802	Doc	12	4812	3.5	3.0	3.2	2.9	4851	chr2L	9217951	intron	tai +	chr2L	9220376	intron	tai +	chr2L	9222802	intron	tai +	chr2L_12_9220001	chr2L_9220001	SF447_1-HE
223	chr2L	9393494	9393528	chr2L	9396486	9396520	jockey	4	2991	0.0	5.0	2.5	1.1	3026	chr2L	9393494	intron	Shawl -	chr2L	9395007	intron	Shawl -	chr2L	9396520	intron	Shawl -	chr2L_4_9395001	chr2L_9395001	SF447_1-HE
243	chr2L	9973728	9973755	chr2L	9980873	9980900	HMS-Beagle	8	7144	0.5	4.5	2.5	2.3	7172	chr2L	9973728	intergenic	not near genes	chr2L	9977314	intergenic	not near genes	chr2L	9980900	intergenic	not near genes	chr2L_8_9975001	chr2L_9975001	SF447_1-HE
246	chr2L	10138167	10138181	chr2L	10143439	10143453	Rt1c	4	5270	4.5	6.5	5.5	0.6	5286	chr2L	10138167	intron	CG44153 -	chr2L	10140810	intron	CG44153 -	chr2L	10143453	intron	CG44153 -	chr2L_4_10140001	chr2L_10140001	SF447_1-HE
247	chr2L	10156319	10156352	chr2L	10163815	10163848	blood	7	7496	4.5	2.5	3.5	1.6	7529	chr2L	10156319	intron,3` UTR	CG44153 -,CG4839 +	chr2L	10160084	intron	CG44153 -	chr2L	10163848	intron	CG44153 -	chr2L_7_10160001	chr2L_10160001	SF447_1-HE
255	chr2L	10592817	10592869	chr2L	10600504	10600557	opus	8	7687	2.0	4.5	3.2	1.9	7740	chr2L	10592817	intron	Trim9 +	chr2L	10596687	intron	Trim9 +	chr2L	10600557	intron	Trim9 +	chr2L_8_10595001	chr2L_10595001	SF447_1-HE
269	chr2L	10876528	10876559	chr2L	10883632	10883663	297	5	7104	2.5	0.0	1.2	2.3	7135	chr2L	10876528	intergenic	not near genes	chr2L	10880096	intergenic	not near genes	chr2L	10883663	intergenic	not near genes	chr2L_5_10880001	chr2L_10880001	SF447_1-HE
271	chr2L	10946947	10946966	chr2L	10956166	10956207	roo	4	9235	5.0	4.5	4.8	0.7	9260	chr2L	10946947	intron	dpr2 -	chr2L	10951577	intron	dpr2 -	chr2L	10956207	intron	dpr2 -	chr2L_4_10950001	chr2L_10950001	SF447_1-HE
273	chr2L	11315244	11315268	chr2L	11317674	11317698	G2	10	2430	4.5	5.5	5.0	1.7	2454	chr2L	11315244	intergenic	not near genes	chr2L	11316471	intergenic	not near genes	chr2L	11317698	intergenic	not near genes	chr2L_10_11315001	chr2L_11315001	SF447_1-HE
280	chr2L	11540569	11540610	chr2L	11548004	11548045	Tabor	4	7435	4.5	3.0	3.8	0.8	7476	chr2L	11540569	intergenic	not near genes	chr2L	11544307	intergenic	not near genes	chr2L	11548045	intergenic	not near genes	chr2L_4_11540001	chr2L_11540001	SF447_1-HE
281	chr2L	11563610	11563624	chr2L	11568840	11568854	copia	4	5229	10.0	0.0	5.0	0.7	5244	chr2L	11563610	intergenic	not near genes	chr2L	11566232	intergenic	not near genes	chr2L	11568854	intergenic	not near genes	chr2L_4_11565001	chr2L_11565001	SF447_1-HE
282	chr2L	11614032	11614085	chr2L	11615553	11615606	hopper2	8	1516	2.5	3.5	3.0	2.0	1574	chr2L	11614032	intron	kek2 +	chr2L	11614819	intron	kek2 +	chr2L	11615606	intron	kek2 +	chr2L_8_11610001	chr2L_11610001	SF447_1-HE
287	chr2L	11713485	11713536	chr2L	11720979	11721030	blood	11	7493	3.5	2.0	2.8	2.9	7545	chr2L	11713485	intergenic	not near genes	chr2L	11717258	intergenic	not near genes	chr2L	11721030	intergenic	CR44143 +	chr2L_11_11715001	chr2L_11715001	SF447_1-HE
310	chr2L	12558299	12558333	chr2L	12565454	12565488	HMS-Beagle	11	7154	4.5	3.5	4.0	2.2	7189	chr2L	12558299	intergenic	not near genes	chr2L	12561894	intergenic	not near genes	chr2L	12565488	intergenic	not near genes	chr2L_11_12560001	chr2L_12560001	SF447_1-HE
318	chr2L	12728895	12728946	chr2L	12729161	12729212	pogo	11	261	4.5	2.5	3.5	2.4	317	chr2L	12728895	intron	MRP +	chr2L	12729054	intron	MRP +	chr2L	12729212	exon	MRP +	chr2L_11_12725001	chr2L_12725001	SF447_1-HE
319	chr2L	12731039	12731082	chr2L	12735832	12735875	F-element	6	4793	5.5	2.0	3.8	1.2	4836	chr2L	12731039	intron	MRP +	chr2L	12733457	intron	MRP +	chr2L	12735875	intron	MRP +	chr2L_6_12730001	chr2L_12730001	SF447_1-HE
320	chr2L	12763804	12763863	chr2L	12764042	12764089	BS	9	232	0.5	0.0	0.2	7.5	285	chr2L	12763804	intergenic	not near genes	chr2L	12763946	intergenic	not near genes	chr2L	12764089	intergenic	not near genes	chr2L_9_12760001	chr2L_12760001	SF447_1-HE
321	chr2L	12791583	12791621	chr2L	12795284	12795322	F-element	17	3700	5.5	6.5	6.0	2.4	3739	chr2L	12791583	intergenic	not near genes	chr2L	12793452	intergenic	not near genes	chr2L	12795322	intergenic	not near genes	chr2L_17_12790001	chr2L_12790001	SF447_1-HE
322	chr2L	12791624	12791629	chr2L	12795282	12795330	F-element	5	3690	5.5	6.0	5.8	0.7	3706	chr2L	12791624	intergenic	not near genes	chr2L	12793477	intergenic	not near genes	chr2L	12795330	intergenic	not near genes	chr2L_5_12790001	chr2L_12790001	SF447_1-HE
325	chr2L	12861686	12861723	chr2L	12863179	12863216	hobo	7	1492	3.5	4.0	3.8	1.5	1530	chr2L	12861686	intergenic	not near genes	chr2L	12862451	intergenic	not near genes	chr2L	12863216	intergenic	not near genes	chr2L_7_12860001	chr2L_12860001	SF447_1-HE
326	chr2L	12894012	12894043	chr2L	12895505	12895536	hobo	16	1491	6.0	15.5	10.8	1.4	1524	chr2L	12894012	intergenic	not near genes	chr2L	12894774	intergenic	not near genes	chr2L	12895536	intergenic	not near genes	chr2L_16_12890001	chr2L_12890001	SF447_1-HE
328	chr2L	12933827	12933879	chr2L	12941319	12941372	blood	11	7493	6.0	4.0	5.0	1.8	7545	chr2L	12933827	intergenic	not near genes	chr2L	12937600	intergenic	not near genes	chr2L	12941372	intergenic	not near genes	chr2L_11_12935001	chr2L_12935001	SF447_1-HE
332	chr2L	13036225	13036245	chr2L	13036493	13036513	X-element	10	268	7.0	4.0	5.5	1.5	288	chr2L	13036225	intron	CG9932 -	chr2L	13036369	intron	CG9932 -	chr2L	13036513	intron	CG9932 -	chr2L_10_13035001	chr2L_13035001	SF447_1-HE
333	chr2L	13036248	13036262	chr2L	13036492	13036512	X-element	5	260	4.5	4.0	4.2	1.0	264	chr2L	13036248	intron	CG9932 -	chr2L	13036380	intron	CG9932 -	chr2L	13036512	intron	CG9932 -	chr2L_5_13035001	chr2L_13035001	SF447_1-HE
345	chr2L	13405624	13405664	chr2L	13410447	13410487	Doc	8	4823	5.0	2.5	3.8	1.7	4863	chr2L	13405624	exon	CG7110 +	chr2L	13408056	intron	CG7110 +	chr2L	13410487	intron	CG7110 +	chr2L_8_13405001	chr2L_13405001	SF447_1-HE
346	chr2L	13449455	13449492	chr2L	13456917	13456954	Quasimodo	4	7462	3.5	5.5	4.5	0.7	7499	chr2L	13449455	intron,5` UTR	CG42784 +,Hsp60D -	chr2L	13453204	intron	CG42784 +	chr2L	13456954	intron	CG42784 +	chr2L_4_13450001	chr2L_13450001	SF447_1-HE
347	chr2L	13481433	13481470	chr2L	13482066	13482076	jockey	18	630	14.5	15.0	14.8	1.1	643	chr2L	13481433	intron	CG42784 +	chr2L	13481754	intron	CG42784 +	chr2L	13482076	intron	CG42784 +	chr2L_18_13480001	chr2L_13480001	SF447_1-HE
351	chr2L	13560381	13560421	chr2L	13565228	13565268	F-element	9	4847	2.5	3.5	3.0	2.2	4887	chr2L	13560381	intron	kuz +	chr2L	13562824	intron	kuz +	chr2L	13565268	intron	kuz +	chr2L_9_13560001	chr2L_13560001	SF447_1-HE
357	chr2L	13761790	13761813	chr2L	13762927	13762950	Doc	5	1136	1.5	2.5	2.0	1.7	1160	chr2L	13761790	intron	TM9SF4 +	chr2L	13762370	intron	TM9SF4 +	chr2L	13762950	intron	TM9SF4 +	chr2L_5_13760001	chr2L_13760001	SF447_1-HE
359	chr2L	13853074	13853115	chr2L	13862250	13862291	roo	10	9176	0.0	2.0	1.0	5.0	9217	chr2L	13853074	intron	CenG1A +	chr2L	13857682	intron	CenG1A +	chr2L	13862291	intron	CenG1A +	chr2L_10_13855001	chr2L_13855001	SF447_1-HE
385	chr2L	14803851	14803907	chr2L	14809080	14809135	copia	16	5226	5.5	3.0	4.2	3.1	5284	chr2L	14803851	intergenic	not near genes	chr2L	14806493	intergenic	not near genes	chr2L	14809135	intergenic	not near genes	chr2L_16_14805001	chr2L_14805001	SF447_1-HE
391	chr2L	14889938	14889980	chr2L	14890389	14890431	jockey	12	451	7.0	6.0	6.5	1.6	493	chr2L	14889938	intergenic	not near genes	chr2L	14890184	intergenic	not near genes	chr2L	14890431	intergenic	not near genes	chr2L_12_14890001	chr2L_14890001	SF447_1-HE
405	chr2L	15446023	15446065	chr2L	15453518	15453558	blood	16	7494	5.5	1.5	3.5	3.6	7535	chr2L	15446023	intergenic	not near genes	chr2L	15449790	intergenic	not near genes	chr2L	15453558	intergenic	not near genes	chr2L_16_15445001	chr2L_15445001	SF447_1-HE
408	chr2L	15586383	15586421	chr2L	15593460	15593497	297	5	7077	5.0	1.0	3.0	1.2	7114	chr2L	15586383	intergenic	not near genes	chr2L	15589940	intergenic	not near genes	chr2L	15593497	intergenic	not near genes	chr2L_5_15585001	chr2L_15585001	SF447_1-HE
411	chr2L	15826872	15826889	chr2L	15829292	15829309	Tabor	6	2420	0.0	5.0	2.5	1.7	2437	chr2L	15826872	intergenic	not near genes	chr2L	15828090	intergenic	not near genes	chr2L	15829309	intergenic	not near genes	chr2L_6_15825001	chr2L_15825001	SF447_1-HE
412	chr2L	15955999	15956057	chr2L	15957492	15957499	hobo	10	1488	2.0	4.5	3.2	2.4	1500	chr2L	15955999	intron	beat-Ib -	chr2L	15956749	intron	beat-Ib -	chr2L	15957499	intron	beat-Ib -	chr2L_10_15955001	chr2L_15955001	SF447_1-HE
421	chr2L	16141144	16141189	chr2L	16146377	16146420	copia	15	5233	4.5	5.5	5.0	2.5	5276	chr2L	16141144	intergenic	not near genes	chr2L	16143782	intergenic	not near genes	chr2L	16146420	intergenic	not near genes	chr2L_15_16140001	chr2L_16140001	SF447_1-HE
422	chr2L	16153720	16153762	chr2L	16160800	16160842	297	10	7080	7.5	6.0	6.8	1.3	7122	chr2L	16153720	intergenic	not near genes	chr2L	16157281	intergenic	not near genes	chr2L	16160842	intergenic	not near genes	chr2L_10_16155001	chr2L_16155001	SF447_1-HE
429	chr2L	16280237	16280283	chr2L	16281431	16281477	1360	7	1194	1.5	2.0	1.8	2.5	1240	chr2L	16280237	intron	crp -	chr2L	16280857	intron	crp -	chr2L	16281477	intron	crp -	chr2L_7_16280001	chr2L_16280001	SF447_1-HE
435	chr2L	16511945	16511989	chr2L	16519085	16519129	HMS-Beagle	15	7139	4.0	1.5	2.8	3.9	7184	chr2L	16511945	intron	CG5953 -	chr2L	16515537	intron	CG5953 -	chr2L	16519129	intron	CG5953 -	chr2L_15_16515001	chr2L_16515001	SF447_1-HE
452	chr2L	16958081	16958133	chr2L	16962895	16962947	Doc	24	4814	7.0	8.5	7.8	2.7	4866	chr2L	16958081	intergenic	not near genes	chr2L	16960514	intergenic	not near genes	chr2L	16962947	intergenic	not near genes	chr2L_24_16960001	chr2L_16960001	SF447_1-HE
461	chr2L	17167539	17167593	chr2L	17167806	17167860	pogo	10	267	4.0	2.5	3.2	2.4	321	chr2L	17167539	intron,intron	CG34106 +,beat-IIIa +	chr2L	17167700	intron,intron	CG34106 +,beat-IIIa +	chr2L	17167860	intron,intron	CG34106 +,beat-IIIa +	chr2L_10_17165001	chr2L_17165001	SF447_1-HE
465	chr2L	17199142	17199181	chr2L	17200635	17200674	hobo	8	1492	4.0	2.5	3.2	1.9	1532	chr2L	17199142	intron	beat-IIIc -	chr2L	17199908	intron	beat-IIIc -	chr2L	17200674	intron	beat-IIIc -	chr2L_8_17195001	chr2L_17195001	SF447_1-HE
467	chr2L	17273173	17273178	chr2L	17277982	17277986	F-element	4	4809	7.0	4.5	5.8	0.6	4813	chr2L	17273173	intergenic	not near genes	chr2L	17275580	intergenic	not near genes	chr2L	17277986	intergenic	not near genes	chr2L_4_17275001	chr2L_17275001	SF447_1-HE
468	chr2L	17273179	17273222	chr2L	17277980	17278030	F-element	11	4806	1.0	4.0	2.5	3.1	4851	chr2L	17273179	intergenic	not near genes	chr2L	17275604	intergenic	not near genes	chr2L	17278030	intergenic	not near genes	chr2L_11_17275001	chr2L_17275001	SF447_1-HE
473	chr2L	17335511	17335525	chr2L	17336711	17336725	1360	5	1200	3.0	3.0	3.0	1.2	1214	chr2L	17335511	intergenic	not near genes	chr2L	17336118	intergenic	not near genes	chr2L	17336725	intergenic	not near genes	chr2L_5_17335001	chr2L_17335001	SF447_1-HE
479	chr2L	17687491	17687506	chr2L	17692262	17692276	F-element	5	4771	8.0	4.0	6.0	0.7	4785	chr2L	17687491	intron	CadN -	chr2L	17689884	intron	CadN -	chr2L	17692276	intron	CadN -	chr2L_5_17685001	chr2L_17685001	SF447_1-HE
483	chr2L	17727848	17727877	chr2L	17729337	17729367	hobo	12	1491	6.0	6.5	6.2	1.7	1519	chr2L	17727848	intron	CadN -	chr2L	17728608	intron	CadN -	chr2L	17729367	intron	CadN -	chr2L_12_17725001	chr2L_17725001	SF447_1-HE
485	chr2L	17819904	17819946	chr2L	17825133	17825175	copia	10	5229	2.5	4.0	3.2	2.4	5271	chr2L	17819904	intron	CadN2 -	chr2L	17822540	intron	CadN2 -	chr2L	17825175	intron	CadN2 -	chr2L_10_17820001	chr2L_17820001	SF447_1-HE
488	chr2L	17911935	17911990	chr2L	17914139	17914194	pogo	8	2204	4.0	4.0	4.0	1.6	2259	chr2L	17911935	intergenic	not near genes	chr2L	17913064	intergenic	not near genes	chr2L	17914194	intergenic	CG43271 -	chr2L_8_17910001	chr2L_17910001	SF447_1-HE
493	chr2L	18051863	18051899	chr2L	18061036	18061072	roo	10	9170	3.0	3.5	3.2	2.4	9209	chr2L	18051863	intron	rdo +	chr2L	18056468	intron	rdo +	chr2L	18061072	intron	rdo +	chr2L_10_18055001	chr2L_18055001	SF447_1-HE
503	chr2L	18408004	18408014	chr2L	18412813	18412813	Doc	5	4807	9.5	0.0	4.8	0.9	4809	chr2L	18408004	intergenic	not near genes	chr2L	18410408	intergenic	not near genes	chr2L	18412813	intergenic	not near genes	chr2L_5_18410001	chr2L_18410001	SF447_1-HE
504	chr2L	18408017	18408031	chr2L	18412812	18412841	Doc	4	4806	8.5	0.0	4.2	0.8	4824	chr2L	18408017	intergenic	not near genes	chr2L	18410429	intergenic	not near genes	chr2L	18412841	intergenic	not near genes	chr2L_4_18410001	chr2L_18410001	SF447_1-HE
517	chr2L	19147343	19147400	chr2L	19154404	19154461	297	11	7060	5.0	5.5	5.2	1.8	7118	chr2L	19147343	intron	brat +	chr2L	19150902	intron	brat +	chr2L	19154461	intron	brat +	chr2L_11_19150001	chr2L_19150001	SF447_1-HE
522	chr2L	19344990	19345034	chr2L	19357225	19357246	blood	12	12231	3.5	6.0	4.8	2.1	12256	chr2L	19344990	intron	dnt -	chr2L	19351118	intron	dnt -	chr2L	19357246	intron	dnt -	chr2L_12_19350001	chr2L_19350001	SF447_1-HE
530	chr2L	19620072	19620126	chr2L	19621086	19621141	jockey	25	1014	8.5	6.5	7.5	2.9	1069	chr2L	19620072	intron	Lar +	chr2L	19620606	intron	Lar +	chr2L	19621141	intron	Lar +	chr2L_25_19620001	chr2L_19620001	SF447_1-HE
532	chr2L	19703521	19703569	chr2L	19712683	19712728	roo	22	9161	10.5	3.5	7.0	2.8	9207	chr2L	19703521	intron	Lar +	chr2L	19708124	intron	Lar +	chr2L	19712728	intron	Lar +	chr2L_22_19705001	chr2L_19705001	SF447_1-HE
534	chr2L	19737351	19737376	chr2L	19740833	19740871	1360	6	3493	1.5	1.5	1.5	2.4	3520	chr2L	19737351	intergenic	Nf-YB +	chr2L	19739111	intergenic	not near genes	chr2L	19740871	intergenic	not near genes	chr2L_6_19735001	chr2L_19735001	SF447_1-HE
537	chr2L	20005867	20005898	chr2L	20010969	20011000	flea	6	5102	4.0	4.0	4.0	1.2	5133	chr2L	20005867	intron	CG43861 -	chr2L	20008434	intron	CG43861 -	chr2L	20011000	intron	CG43861 -	chr2L_6_20005001	chr2L_20005001	SF447_1-HE
540	chr2L	20272088	20272141	chr2L	20282825	20282878	copia	18	10737	5.5	4.5	5.0	3.0	10790	chr2L	20272088	intergenic	not near genes	chr2L	20277483	intergenic	not near genes	chr2L	20282878	intergenic	not near genes	chr2L_18_20275001	chr2L_20275001	SF447_1-HE
544	chr2L	20303141	20303171	chr2L	20310635	20310656	blood	5	7492	0.5	2.0	1.2	2.3	7515	chr2L	20303141	intergenic	not near genes	chr2L	20306898	intergenic	not near genes	chr2L	20310656	intergenic	not near genes	chr2L_5_20305001	chr2L_20305001	SF447_1-HE
547	chr2L	20372194	20372224	chr2L	20372469	20372493	pogo	6	273	2.0	1.5	1.8	2.1	299	chr2L	20372194	intergenic	Ugt37a1 -	chr2L	20372344	intergenic	Ugt37a1 -	chr2L	20372493	exon	Ugt37a1 -	chr2L_6_20370001	chr2L_20370001	SF447_1-HE
555	chr2L	20568600	20568641	chr2L	20569073	20569126	X-element	10	481	4.5	2.5	3.5	2.2	526	chr2L	20568600	intron	CR45347 +	chr2L	20568863	intron	CR45347 +	chr2L	20569126	intron	CR45347 +	chr2L_10_20565001	chr2L_20565001	SF447_1-HE
556	chr2L	20576212	20576246	chr2L	20583706	20583740	blood	7	7491	2.0	3.0	2.5	2.0	7528	chr2L	20576212	intergenic	CR45347 +	chr2L	20579976	intergenic	not near genes	chr2L	20583740	3` UTR	CR44909 -	chr2L_7_20575001	chr2L_20575001	SF447_1-HE
560	chr2L	20835791	20835829	chr2L	20836532	20836572	Quasimodo	4	742	3.0	2.0	2.5	1.1	781	chr2L	20835791	5` UTR	Oseg5 -	chr2L	20836182	intergenic	Oseg5 -,Spn38F -	chr2L	20836572	intergenic	Spn38F -	chr2L_4_20835001	chr2L_20835001	SF447_1-HE
562	chr2L	20891511	20891534	chr2L	20896636	20896660	jockey	4	5126	2.5	0.5	1.5	1.6	5149	chr2L	20891511	intron,intron	CG43739 -,sky -	chr2L	20894086	intron,intron	CG43739 -,sky -	chr2L	20896660	intron,intron	CG43739 -,sky -	chr2L_4_20890001	chr2L_20890001	SF447_1-HE
565	chr2L	20976629	20976672	chr2L	20981470	20981513	X-element	10	4840	1.5	3.5	2.5	2.9	4884	chr2L	20976629	intron	CG42238 -	chr2L	20979071	intron	CG42238 -	chr2L	20981513	intron	CG42238 -	chr2L_10_20975001	chr2L_20975001	SF447_1-HE
567	chr2L	21020254	21020306	chr2L	21023957	21024009	NOF	19	3702	4.5	6.0	5.2	3.1	3755	chr2L	21020254	intron	CG42238 -	chr2L	21022132	intron	CG42238 -	chr2L	21024009	intron	CG42238 -	chr2L_19_21020001	chr2L_21020001	SF447_1-HE
568	chr2L	21041112	21041166	chr2L	21049399	21049445	Tirant	16	8286	3.5	3.0	3.2	3.8	8333	chr2L	21041112	intron	CG42238 -	chr2L	21045278	intron	CG42238 -	chr2L	21049445	intron	CG42238 -	chr2L_16_21045001	chr2L_21045001	SF447_1-HE
576	chr2L	21597030	21597056	chr2L	21604800	21604826	roo	12	7767	7.0	13.5	10.2	1.1	7796	chr2L	21597030	intergenic	not near genes	chr2L	21600928	intergenic	not near genes	chr2L	21604826	intergenic	not near genes	chr2L_12_21600001	chr2L_21600001	SF447_1-HE
578	chr2L	21652945	21652989	chr2L	21656522	21656566	invader4	11	3577	4.0	2.0	3.0	2.8	3621	chr2L	21652945	intergenic	not near genes	chr2L	21654756	intergenic	not near genes	chr2L	21656566	intergenic	not near genes	chr2L_11_21650001	chr2L_21650001	SF447_1-HE
590	chr2L	21981669	21981703	chr2L	21990860	21990894	roo	7	9191	4.5	8.5	6.5	0.9	9225	chr2L	21981669	exon	CG2528 -	chr2L	21986282	intron	CG2528 -	chr2L	21990894	exon	CG2528 -	chr2L_7_21985001	chr2L_21985001	SF447_1-HE
597	chr2L	22258591	22258641	chr2L	22260741	22260791	G6	21	2150	6.0	9.0	7.5	2.5	2200	chr2L	22258591	intergenic	Tif-IA +	chr2L	22259691	intergenic	not near genes	chr2L	22260791	intergenic	not near genes	chr2L_21_22255001	chr2L_22255001	SF447_1-HE
598	chr2L	22548927	22548940	chr2L	22550178	22550191	1360	8	1251	0.0	9.5	4.8	1.4	1264	chr2L	22548927	intergenic	CG17490 +	chr2L	22549559	intergenic	not near genes	chr2L	22550191	intergenic	CG17493 +	chr2L_8_22545001	chr2L_22545001	SF447_1-HE
600	chr2L	22776397	22776448	chr2L	22778212	22778263	S-element	7	1815	2.0	2.0	2.0	2.3	1866	chr2L	22776397	intergenic	not near genes	chr2L	22777330	intergenic	not near genes	chr2L	22778263	intergenic	not near genes	chr2L_7_22775001	chr2L_22775001	SF447_1-HE
602	chr2R	469939	469980	chr2R	473206	473247	F-element	4	3265	1.5	1.5	1.5	1.6	3308	chr2R	469939	intergenic	not near genes	chr2R	471593	intergenic	not near genes	chr2R	473247	intergenic	not near genes	chr2R_4_470001	chr2R_470001	SF447_1-HE
603	chr2R	529315	529350	chr2R	537966	538000	Max-element	11	8650	1.5	6.5	4.0	2.2	8685	chr2R	529315	intron	CG40378 +	chr2R	533658	intron	CG40378 +	chr2R	538000	intron	CG40378 +	chr2R_11_530001	chr2R_530001	SF447_1-HE
604	chr2R	2498969	2499007	chr2R	2508142	2508180	roo	15	9172	2.0	2.5	2.2	4.7	9211	chr2R	2498969	intron	MFS17 -	chr2R	2503574	intron	MFS17 -	chr2R	2508180	intron	MFS17 -	chr2R_15_2500001	chr2R_2500001	SF447_1-HE
607	chr2R	3532595	3532616	chr2R	3536063	3536085	Doc	7	3468	2.5	1.5	2.0	2.3	3490	chr2R	3532595	intergenic	not near genes	chr2R	3534340	intergenic	not near genes	chr2R	3536085	intergenic	not near genes	chr2R_7_3530001	chr2R_3530001	SF447_1-HE
611	chr2R	4622927	4622976	chr2R	4624111	4624161	1360	16	1184	4.5	1.0	2.8	4.2	1234	chr2R	4622927	intergenic	CR44101 -	chr2R	4623544	intergenic	not near genes	chr2R	4624161	intergenic	not near genes	chr2R_16_4620001	chr2R_4620001	SF447_1-HE
614	chr2R	4750337	4750371	chr2R	4751520	4751554	1360	7	1183	1.0	1.5	1.2	3.2	1217	chr2R	4750337	intron	conu +	chr2R	4750946	intron	conu +	chr2R	4751554	intron	conu +	chr2R_7_4750001	chr2R_4750001	SF447_1-HE
623	chr2R	5417984	5418022	chr2R	5420642	5420680	Burdock	14	2658	4.5	4.5	4.5	2.5	2696	chr2R	5417984	intron	laccase2 +	chr2R	5419332	intron	laccase2 +	chr2R	5420680	intron	laccase2 +	chr2R_14_5415001	chr2R_5415001	SF447_1-HE
624	chr2R	5450088	5450110	chr2R	5451017	5451039	baggins	5	928	6.0	6.0	6.0	0.7	951	chr2R	5450088	intron	laccase2 +	chr2R	5450564	intron	laccase2 +	chr2R	5451039	intron	laccase2 +	chr2R_5_5450001	chr2R_5450001	SF447_1-HE
629	chr2R	5543198	5543218	chr2R	5547307	5547328	invader1	5	4110	0.0	9.0	4.5	0.9	4130	chr2R	5543198	intron	CG30438 +	chr2R	5545263	intron	CG30438 +	chr2R	5547328	intron	CG30438 +	chr2R_5_5545001	chr2R_5545001	SF447_1-HE
634	chr2R	5869270	5869303	chr2R	5874371	5874405	flea	9	5101	6.0	3.0	4.5	1.6	5135	chr2R	5869270	intergenic	not near genes	chr2R	5871838	intergenic	not near genes	chr2R	5874405	intergenic	not near genes	chr2R_9_5870001	chr2R_5870001	SF447_1-HE
636	chr2R	5902157	5902189	chr2R	5909733	5909774	17.6	6	7583	3.0	2.5	2.8	1.6	7617	chr2R	5902157	intron	CG43366 +	chr2R	5905966	intron	CG43366 +	chr2R	5909774	intron	CG43366 +	chr2R_6_5905001	chr2R_5905001	SF447_1-HE
637	chr2R	6096703	6096737	chr2R	6101927	6101961	BS	7	5224	2.0	2.5	2.2	2.2	5258	chr2R	6096703	intron	EcR -	chr2R	6099332	intron	EcR -	chr2R	6101961	intron	EcR -	chr2R_7_6095001	chr2R_6095001	SF447_1-HE
654	chr2R	7235811	7235847	chr2R	7240929	7240965	jockey	5	5118	1.0	2.0	1.5	2.0	5154	chr2R	7235811	intergenic	not near genes	chr2R	7238388	intergenic	not near genes	chr2R	7240965	intergenic	not near genes	chr2R_5_7235001	chr2R_7235001	SF447_1-HE
672	chr2R	8330844	8330882	chr2R	8331356	8331394	roo	12	511	5.0	14.5	9.8	1.1	550	chr2R	8330844	intron	pdm3 +	chr2R	8331119	intron	pdm3 +	chr2R	8331394	intron	pdm3 +	chr2R_12_8330001	chr2R_8330001	SF447_1-HE
673	chr2R	8398184	8398240	chr2R	8402991	8403047	Doc	12	4807	1.0	3.0	2.0	4.0	4863	chr2R	8398184	intron	CG2121 -	chr2R	8400616	intron	CG2121 -	chr2R	8403047	intron	CG2121 -	chr2R_12_8400001	chr2R_8400001	SF447_1-HE
680	chr2R	8722741	8722789	chr2R	8723007	8723054	pogo	4	266	1.5	4.0	2.8	1.1	313	chr2R	8722741	intron	CG14767 -	chr2R	8722898	intron	CG14767 -	chr2R	8723054	intron	CG14767 -	chr2R_4_8720001	chr2R_8720001	SF447_1-HE
681	chr2R	8777883	8777943	chr2R	8784100	8784154	diver	9	6215	3.5	3.0	3.2	2.1	6271	chr2R	8777883	intergenic	not near genes	chr2R	8781018	intergenic	not near genes	chr2R	8784154	intergenic	not near genes	chr2R_9_8780001	chr2R_8780001	SF447_1-HE
691	chr2R	9212670	9212720	chr2R	9213182	9213232	roo	8	511	1.0	6.5	3.8	1.7	562	chr2R	9212670	intergenic	CR45309 +	chr2R	9212951	intergenic	CR45309 +	chr2R	9213232	5` UTR	CR45309 +	chr2R_8_9210001	chr2R_9210001	SF447_1-HE
695	chr2R	9480052	9480099	chr2R	9490609	9490656	roo	10	10557	3.5	5.0	4.2	1.9	10604	chr2R	9480052	intergenic	not near genes	chr2R	9485354	intergenic	not near genes	chr2R	9490656	intergenic	not near genes	chr2R_10_9485001	chr2R_9485001	SF447_1-HE
701	chr2R	9726598	9726636	chr2R	9734177	9734215	17.6	10	7579	4.5	8.0	6.2	1.4	7617	chr2R	9726598	intron	sqa -	chr2R	9730406	intron	sqa -	chr2R	9734215	intron	sqa -	chr2R_10_9730001	chr2R_9730001	SF447_1-HE
707	chr2R	9871033	9871073	chr2R	9871545	9871585	roo	5	508	1.0	5.5	3.2	1.2	552	chr2R	9871033	intron	cbx -	chr2R	9871309	intron	cbx -	chr2R	9871585	intron,5` UTR	cbx -,CG18446 +	chr2R_5_9870001	chr2R_9870001	SF447_1-HE
708	chr2R	9945414	9945462	chr2R	9945636	9945684	BS	10	222	5.0	4.0	4.5	1.8	270	chr2R	9945414	intron	Mef2 -	chr2R	9945549	intron	Mef2 -	chr2R	9945684	intron	Mef2 -	chr2R_10_9945001	chr2R_9945001	SF447_1-HE
713	chr2R	10005832	10005879	chr2R	10007023	10007068	1360	11	1190	5.0	3.5	4.2	2.1	1236	chr2R	10005832	intron	Pka-R2 -	chr2R	10006450	intron	Pka-R2 -	chr2R	10007068	intron	Pka-R2 -	chr2R_11_10005001	chr2R_10005001	SF447_1-HE
724	chr2R	10875610	10875651	chr2R	10875734	10875775	1360	5	119	2.0	0.0	1.0	2.5	165	chr2R	10875610	intergenic	nclb +,CG30016 -	chr2R	10875692	intergenic	nclb +,CG30016 -	chr2R	10875775	5` UTR	nclb +	chr2R_5_10875001	chr2R_10875001	SF447_1-HE
727	chr2R	10948021	10948054	chr2R	10955597	10955631	17.6	7	7577	0.0	5.5	2.8	1.8	7610	chr2R	10948021	intergenic	not near genes	chr2R	10951826	intergenic	not near genes	chr2R	10955631	intergenic	not near genes	chr2R_7_10950001	chr2R_10950001	SF447_1-HE
730	chr2R	11009794	11009843	chr2R	11018994	11019043	roo	10	9198	3.0	5.0	4.0	2.0	9249	chr2R	11009794	intron	luna -	chr2R	11014418	intron	luna -	chr2R	11019043	intron	luna -	chr2R_10_11010001	chr2R_11010001	SF447_1-HE
731	chr2R	11019857	11019895	chr2R	11024949	11024963	jockey	12	5090	4.0	4.0	4.0	2.4	5106	chr2R	11019857	intron	luna -	chr2R	11022410	intron	luna -	chr2R	11024963	intron	luna -	chr2R_12_11020001	chr2R_11020001	SF447_1-HE
739	chr2R	11207803	11208019	chr2R	11208011	11208144	BS	8	182	0.0	0.0	0.0	8.0	341	chr2R	11207803	intron	shn +	chr2R	11207974	intron	shn +	chr2R	11208144	intron	shn +	chr2R_8_11205001	chr2R_11205001	SF447_1-HE
743	chr2R	11415530	11415548	chr2R	11418705	11418723	opus	7	3175	6.5	14.0	10.2	0.6	3193	chr2R	11415530	intron	Drip -	chr2R	11417126	intron	Drip -	chr2R	11418723	intron	Drip -	chr2R_7_11415001	chr2R_11415001	SF447_1-HE
746	chr2R	11472656	11472676	chr2R	11473878	11473899	pogo	6	1222	2.5	3.0	2.8	1.6	1243	chr2R	11472656	intergenic	not near genes	chr2R	11473278	intergenic	not near genes	chr2R	11473899	intergenic	not near genes	chr2R_6_11470001	chr2R_11470001	SF447_1-HE
765	chr2R	12481146	12481162	chr2R	12482956	12482992	roo	5	1826	2.5	6.5	4.5	0.9	1846	chr2R	12481146	exon	Dh44-R2 +	chr2R	12482069	intron	Dh44-R2 +	chr2R	12482992	intron	Dh44-R2 +	chr2R_5_12480001	chr2R_12480001	SF447_1-HE
772	chr2R	12707492	12707546	chr2R	12715884	12715938	roo	7	8392	3.0	1.5	2.2	2.2	8446	chr2R	12707492	intron	CG42663 +	chr2R	12711715	intron	CG42663 +	chr2R	12715938	intron	CG42663 +	chr2R_7_12710001	chr2R_12710001	SF447_1-HE
776	chr2R	12789271	12789313	chr2R	12797660	12797702	roo	11	8386	4.5	4.0	4.2	2.1	8431	chr2R	12789271	intron,3` UTR	sca +,CR45137 -	chr2R	12793486	intron,intron	sca +,CR45137 -	chr2R	12797702	intron,3` UTR	sca +,CR45137 -	chr2R_11_12790001	chr2R_12790001	SF447_1-HE
778	chr2R	12819435	12819460	chr2R	12824526	12824551	jockey	5	5091	8.5	5.0	6.8	0.6	5116	chr2R	12819435	intergenic	not near genes	chr2R	12821993	intergenic	not near genes	chr2R	12824551	intergenic	not near genes	chr2R_5_12820001	chr2R_12820001	SF447_1-HE
781	chr2R	13136822	13136855	chr2R	13141646	13141667	Doc	5	4821	2.5	2.5	2.5	1.4	4845	chr2R	13136822	exon	Cap-G +	chr2R	13139244	intron	Cap-G +	chr2R	13141667	intron	Cap-G +	chr2R_5_13135001	chr2R_13135001	SF447_1-HE
788	chr2R	13580482	13580523	chr2R	13580858	13580899	jockey	5	375	1.0	2.0	1.5	2.0	417	chr2R	13580482	3` UTR	CG6191 -	chr2R	13580690	3` UTR,3` UTR	CG6191 -,CG45088 -	chr2R	13580899	3` UTR,3` UTR	CG6191 -,CG45088 -	chr2R_5_13580001	chr2R_13580001	SF447_1-HE
794	chr2R	13728106	13728116	chr2R	13735792	13735802	opus	4	7686	2.0	0.0	1.0	2.0	7696	chr2R	13728106	intron	fas +	chr2R	13731954	intron	fas +	chr2R	13735802	intron	fas +	chr2R_4_13730001	chr2R_13730001	SF447_1-HE
799	chr2R	13905579	13905627	chr2R	13907583	13907635	Rt1a	8	2006	0.0	4.0	2.0	2.7	2056	chr2R	13905579	intron	shot -	chr2R	13906607	intron	shot -	chr2R	13907635	intron	shot -	chr2R_8_13905001	chr2R_13905001	SF447_1-HE
811	chr2R	14467279	14467327	chr2R	14476463	14476511	roo	10	9184	2.0	3.5	2.8	2.6	9232	chr2R	14467279	intergenic	not near genes	chr2R	14471895	intergenic	not near genes	chr2R	14476511	5` UTR	CR44462 +	chr2R_10_14470001	chr2R_14470001	SF447_1-HE
812	chr2R	14497371	14497410	chr2R	14498563	14498602	1360	5	1192	2.0	4.0	3.0	1.2	1231	chr2R	14497371	3` UTR	Cpsf160 -	chr2R	14497986	intron	Cpsf160 -	chr2R	14498602	3` UTR	Cpsf160 -	chr2R_5_14495001	chr2R_14495001	SF447_1-HE
827	chr2R	15004703	15004745	chr2R	15005058	15005100	jockey	7	353	5.0	0.5	2.8	1.8	397	chr2R	15004703	intergenic	not near genes	chr2R	15004902	intergenic	not near genes	chr2R	15005100	intergenic	not near genes	chr2R_7_15000001	chr2R_15000001	SF447_1-HE
828	chr2R	15015429	15015488	chr2R	15022878	15022934	mdg1	9	7447	0.0	2.5	1.2	4.1	7505	chr2R	15015429	intron	hbs +	chr2R	15019182	intron	hbs +	chr2R	15022934	intron	hbs +	chr2R_9_15015001	chr2R_15015001	SF447_1-HE
831	chr2R	15084952	15084990	chr2R	15092027	15092065	297	8	7075	5.5	4.0	4.8	1.4	7113	chr2R	15084952	intergenic	not near genes	chr2R	15088508	intergenic	not near genes	chr2R	15092065	5` UTR	CR44457 +	chr2R_8_15085001	chr2R_15085001	SF447_1-HE
832	chr2R	15119295	15119347	chr2R	15127802	15127853	Tirant	6	8505	7.5	0.5	4.0	1.2	8558	chr2R	15119295	intron	chn +	chr2R	15123574	intron	chn +	chr2R	15127853	intron	chn +	chr2R_6_15120001	chr2R_15120001	SF447_1-HE
874	chr2R	17176353	17176387	chr2R	17182569	17182603	diver	11	6215	0.0	7.0	3.5	2.4	6250	chr2R	17176353	intergenic	not near genes	chr2R	17179478	intergenic	not near genes	chr2R	17182603	intergenic	not near genes	chr2R_11_17175001	chr2R_17175001	SF447_1-HE
876	chr2R	17236481	17236537	chr2R	17241711	17241767	copia	13	5230	3.0	3.5	3.2	3.1	5286	chr2R	17236481	intron	mbl +	chr2R	17239124	intron	mbl +	chr2R	17241767	intron	mbl +	chr2R_13_17235001	chr2R_17235001	SF447_1-HE
885	chr2R	17485892	17485953	chr2R	17490680	17490739	F-element	11	4785	1.5	4.5	3.0	2.8	4847	chr2R	17485892	5` UTR,intron	CG43110 -,NT5E-2 +	chr2R	17488316	intron	NT5E-2 +	chr2R	17490739	intron	NT5E-2 +	chr2R_11_17485001	chr2R_17485001	SF447_1-HE
893	chr2R	17784001	17784052	chr2R	17784266	17784319	pogo	10	265	3.0	2.0	2.5	2.9	318	chr2R	17784001	intergenic	mir-31a -	chr2R	17784160	intergenic	mir-31a -	chr2R	17784319	intergenic	mir-31a -	chr2R_10_17780001	chr2R_17780001	SF447_1-HE
908	chr2R	18111661	18111716	chr2R	18115555	18115601	F-element	4	3891	1.0	0.0	0.5	2.7	3940	chr2R	18111661	intergenic	not near genes	chr2R	18113631	intergenic	not near genes	chr2R	18115601	intergenic	not near genes	chr2R_4_18110001	chr2R_18110001	SF447_1-HE
912	chr2R	18358370	18358415	chr2R	18372608	18372653	roo	14	14235	6.5	7.0	6.8	1.8	14283	chr2R	18358370	intergenic	not near genes	chr2R	18365512	intergenic	not near genes	chr2R	18372653	intergenic	not near genes	chr2R_14_18365001	chr2R_18365001	SF447_1-HE
915	chr2R	18487805	18487848	chr2R	18495300	18495344	blood	10	7496	2.5	2.5	2.5	2.9	7539	chr2R	18487805	intron	CG30116 -	chr2R	18491574	intron	CG30116 -	chr2R	18495344	intron	CG30116 -	chr2R_10_18490001	chr2R_18490001	SF447_1-HE
916	chr2R	18575812	18575816	chr2R	18581988	18582030	3S18	4	6196	3.0	3.5	3.2	1.0	6218	chr2R	18575812	intron	GEFmeso -	chr2R	18578921	intron	GEFmeso -	chr2R	18582030	intron	GEFmeso -	chr2R_4_18575001	chr2R_18575001	SF447_1-HE
917	chr2R	18590848	18590899	chr2R	18600026	18600076	roo	9	9178	1.0	2.0	1.5	3.6	9228	chr2R	18590848	intron	GEFmeso -	chr2R	18595462	intron	GEFmeso -	chr2R	18600076	intron	GEFmeso -	chr2R_9_18595001	chr2R_18595001	SF447_1-HE
938	chr2R	19715834	19715855	chr2R	19723325	19723350	blood	5	7493	3.0	1.0	2.0	1.7	7516	chr2R	19715834	intergenic	not near genes	chr2R	19719592	intergenic	not near genes	chr2R	19723350	intergenic	not near genes	chr2R_5_19715001	chr2R_19715001	SF447_1-HE
939	chr2R	19776568	19776614	chr2R	19779917	19779963	jockey	7	3349	4.0	1.5	2.8	1.8	3395	chr2R	19776568	intergenic	not near genes	chr2R	19778266	intergenic	not near genes	chr2R	19779963	intergenic	not near genes	chr2R_7_19775001	chr2R_19775001	SF447_1-HE
942	chr2R	19914825	19914874	chr2R	19922263	19922312	mdg1	7	7436	5.0	2.0	3.5	1.6	7487	chr2R	19914825	intergenic	not near genes	chr2R	19918568	intergenic	not near genes	chr2R	19922312	intergenic	not near genes	chr2R_7_19915001	chr2R_19915001	SF447_1-HE
943	chr2R	19957405	19957456	chr2R	19962633	19962684	copia	15	5228	2.5	4.5	3.5	3.3	5279	chr2R	19957405	intergenic	CG44623 +	chr2R	19960044	intergenic	not near genes	chr2R	19962684	intergenic	not near genes	chr2R_15_19960001	chr2R_19960001	SF447_1-HE
953	chr2R	20087983	20088026	chr2R	20088111	20088160	1360	7	133	1.0	1.5	1.2	3.2	177	chr2R	20087983	intergenic	not near genes	chr2R	20088072	intergenic	not near genes	chr2R	20088160	intergenic	not near genes	chr2R_7_20085001	chr2R_20085001	SF447_1-HE
966	chr2R	20739420	20739474	chr2R	20744214	20744261	F-element	18	4793	8.5	2.5	5.5	2.8	4841	chr2R	20739420	intron	dpr +	chr2R	20741840	intron	dpr +	chr2R	20744261	intron	dpr +	chr2R_18_20740001	chr2R_20740001	SF447_1-HE
968	chr2R	20783293	20783323	chr2R	20788091	20788113	F-element	9	4797	2.5	6.0	4.2	1.7	4820	chr2R	20783293	intergenic	not near genes	chr2R	20785703	intergenic	not near genes	chr2R	20788113	intergenic	CG43666 -	chr2R_9_20785001	chr2R_20785001	SF447_1-HE
977	chr2R	21151133	21151145	chr2R	21153819	21153831	opus	5	2686	0.0	8.0	4.0	1.0	2698	chr2R	21151133	intron	CG30389 -	chr2R	21152482	intron	CG30389 -	chr2R	21153831	intron	CG30389 -	chr2R_5_21150001	chr2R_21150001	SF447_1-HE
993	chr2R	21738254	21738309	chr2R	21747439	21747466	roo	7	9181	3.0	6.5	4.8	1.2	9212	chr2R	21738254	intergenic	not near genes	chr2R	21742860	intergenic	not near genes	chr2R	21747466	intergenic	not near genes	chr2R_7_21740001	chr2R_21740001	SF447_1-HE
995	chr2R	21753064	21753117	chr2R	21753575	21753627	roo	7	509	4.0	4.5	4.2	1.3	563	chr2R	21753064	intergenic	not near genes	chr2R	21753346	intergenic	not near genes	chr2R	21753627	intergenic	not near genes	chr2R_7_21750001	chr2R_21750001	SF447_1-HE
1010	chr2R	22349671	22349721	chr2R	22351481	22351531	jockey	22	1810	5.5	6.0	5.8	3.2	1860	chr2R	22349671	intron	Liprin-gamma -	chr2R	22350601	intron	Liprin-gamma -	chr2R	22351531	intron	Liprin-gamma -	chr2R_22_22350001	chr2R_22350001	SF447_1-HE
1015	chr2R	22465295	22465322	chr2R	22465520	22465547	BS	9	225	9.0	3.5	6.2	1.2	252	chr2R	22465295	intron	CG10384 +	chr2R	22465421	intron	CG10384 +	chr2R	22465547	intron	CG10384 +	chr2R_9_22465001	chr2R_22465001	SF447_1-HE
1017	chr2R	22525724	22525766	chr2R	22529305	22529346	jockey	10	3581	4.0	3.0	3.5	2.2	3622	chr2R	22525724	intron	px -	chr2R	22527535	intron	px -	chr2R	22529346	intron	px -	chr2R_10_22525001	chr2R_22525001	SF447_1-HE
1025	chr2R	22774946	22774994	chr2R	22775391	22775439	jockey	17	445	5.5	5.5	5.5	2.6	493	chr2R	22774946	intron	CG42260 -	chr2R	22775192	intron	CG42260 -	chr2R	22775439	intron	CG42260 -	chr2R_17_22775001	chr2R_22775001	SF447_1-HE
1045	chr2R	23529550	23529591	chr2R	23537152	23537193	412	10	7602	5.5	2.0	3.8	2.1	7643	chr2R	23529550	intron	bw -	chr2R	23533372	intron	bw -	chr2R	23537193	exon	bw -	chr2R_10_23530001	chr2R_23530001	SF447_1-HE
1051	chr2R	23914285	23914332	chr2R	23921935	23921982	412	6	7650	1.5	3.0	2.2	1.9	7697	chr2R	23914285	exon	kcc +	chr2R	23918134	intron	kcc +	chr2R	23921982	exon	kcc +	chr2R_6_23915001	chr2R_23915001	SF447_1-HE
1055	chr2R	24147045	24147086	chr2R	24154645	24154689	412	4	7602	2.5	2.5	2.5	1.1	7644	chr2R	24147045	intron	Dat +	chr2R	24150867	intron	Dat +	chr2R	24154689	intron	Dat +	chr2R_4_24150001	chr2R_24150001	SF447_1-HE
1056	chr2R	24177213	24177237	chr2R	24184724	24184748	412	5	7511	1.5	0.0	0.8	2.8	7535	chr2R	24177213	3` UTR	Nop60B +	chr2R	24180980	intron	Nop60B +	chr2R	24184748	3` UTR	Nop60B +	chr2R_5_24180001	chr2R_24180001	SF447_1-HE
1061	chr2R	24647577	24647616	chr2R	24655160	24655199	412	5	7583	1.5	2.0	1.8	1.8	7622	chr2R	24647577	intergenic	not near genes	chr2R	24651388	intergenic	not near genes	chr2R	24655199	intergenic	not near genes	chr2R_5_24650001	chr2R_24650001	SF447_1-HE
1064	chr2R	24727868	24727915	chr2R	24735402	24735432	mdg1	11	7532	5.0	5.5	5.2	1.8	7564	chr2R	24727868	intron	Mid1 -	chr2R	24731650	intron	Mid1 -	chr2R	24735432	intron	Mid1 -	chr2R_11_24730001	chr2R_24730001	SF447_1-HE
1070	chr2R	25141630	25141665	chr2R	25159346	25159381	roo	9	17716	3.0	2.0	2.5	2.6	17751	chr2R	25141630	intergenic	not near genes	chr2R	25150506	intergenic	not near genes	chr2R	25159381	intergenic	not near genes	chr2R_9_25150001	chr2R_25150001	SF447_1-HE
1075	chr3L	110194	110237	chr3L	119386	119430	roo	6	9193	2.5	4.5	3.5	1.3	9236	chr3L	110194	intergenic	not near genes	chr3L	114812	intergenic	not near genes	chr3L	119430	intergenic	not near genes	chr3L_6_110001	chr3L_110001	SF447_1-HE
1080	chr3L	402663	402717	chr3L	409742	409796	297	26	7077	7.0	7.5	7.2	3.2	7133	chr3L	402663	intergenic	not near genes	chr3L	406230	intergenic	not near genes	chr3L	409796	intergenic	not near genes	chr3L_26_405001	chr3L_405001	SF447_1-HE
1090	chr3L	789891	789946	chr3L	790402	790457	roo	8	505	5.5	1.5	3.5	1.8	566	chr3L	789891	intergenic	not near genes	chr3L	790174	intergenic	not near genes	chr3L	790457	intergenic	not near genes	chr3L_8_790001	chr3L_790001	SF447_1-HE
1092	chr3L	857971	858031	chr3L	866478	866538	Tirant	18	8506	2.5	2.5	2.5	5.1	8567	chr3L	857971	intergenic	not near genes	chr3L	862254	intergenic	not near genes	chr3L	866538	5` UTR	CG12502 +	chr3L_18_860001	chr3L_860001	SF447_1-HE
1093	chr3L	925153	925195	chr3L	932605	932647	mdg1	8	7452	2.5	1.0	1.8	2.9	7494	chr3L	925153	intron	Glut1 +	chr3L	928900	intron	Glut1 +	chr3L	932647	intron	Glut1 +	chr3L_8_925001	chr3L_925001	SF447_1-HE
1095	chr3L	939751	939797	chr3L	940898	940944	jockey	22	1147	3.5	6.0	4.8	3.8	1193	chr3L	939751	intron	Glut1 +	chr3L	940348	intron	Glut1 +	chr3L	940944	intron	Glut1 +	chr3L_22_940001	chr3L_940001	SF447_1-HE
1100	chr3L	1154120	1154163	chr3L	1163286	1163326	roo	4	9170	1.5	1.5	1.5	1.6	9206	chr3L	1154120	intron	bab2 -	chr3L	1158723	intron	bab2 -	chr3L	1163326	intron	bab2 -	chr3L_4_1155001	chr3L_1155001	SF447_1-HE
1102	chr3L	1219573	1219610	chr3L	1227332	1227369	412	4	7754	4.0	3.0	3.5	0.9	7796	chr3L	1219573	intron	mwh +	chr3L	1223471	intron	mwh +	chr3L	1227369	intron	mwh +	chr3L_4_1220001	chr3L_1220001	SF447_1-HE
1111	chr3L	1485713	1485739	chr3L	1486910	1486936	1360	4	1195	2.0	5.0	3.5	0.9	1223	chr3L	1485713	intron	stet -	chr3L	1486324	intron	stet -	chr3L	1486936	intron	stet -	chr3L_4_1485001	chr3L_1485001	SF447_1-HE
1112	chr3L	1506003	1506028	chr3L	1513626	1513651	17.6	5	7623	3.0	6.0	4.5	0.9	7648	chr3L	1506003	intron,intron	Psa +,cue -	chr3L	1509827	intron,intron	Psa +,cue -	chr3L	1513651	intron,intron	Psa +,cue -	chr3L_5_1505001	chr3L_1505001	SF447_1-HE
1119	chr3L	2108228	2108280	chr3L	2113458	2113510	copia	9	5230	0.5	1.0	0.8	5.0	5282	chr3L	2108228	intron	sls -	chr3L	2110869	intron	sls -	chr3L	2113510	intron	sls -	chr3L_9_2110001	chr3L_2110001	SF447_1-HE
1150	chr3L	2927813	2927869	chr3L	2936116	2936171	Tirant	15	8302	4.0	4.0	4.0	3.0	8358	chr3L	2927813	intron	Shab +	chr3L	2931992	intron	Shab +	chr3L	2936171	intron	Shab +	chr3L_15_2930001	chr3L_2930001	SF447_1-HE
1153	chr3L	3061263	3061316	chr3L	3069872	3069919	Tirant	15	8608	5.0	7.0	6.0	2.1	8656	chr3L	3061263	intron	CG32486 -	chr3L	3065591	intron	CG32486 -	chr3L	3069919	intron	CG32486 -	chr3L_15_3065001	chr3L_3065001	SF447_1-HE
1158	chr3L	3281421	3281471	chr3L	3281943	3281991	Doc	7	522	4.5	2.5	3.5	1.6	570	chr3L	3281421	intron	CG12017 +	chr3L	3281706	intron	CG12017 +	chr3L	3281991	intron	CG12017 +	chr3L_7_3280001	chr3L_3280001	SF447_1-HE
1170	chr3L	3601279	3601325	chr3L	3606616	3606640	copia	10	5335	2.5	0.5	1.5	4.0	5361	chr3L	3601279	intron	Eip63E +	chr3L	3603960	intron	Eip63E +	chr3L	3606640	intron	Eip63E +	chr3L_10_3600001	chr3L_3600001	SF447_1-HE
1179	chr3L	3833712	3833757	chr3L	3833979	3834024	pogo	14	267	4.0	0.5	2.2	4.4	312	chr3L	3833712	intron	enc +	chr3L	3833868	intron	enc +	chr3L	3834024	intron	enc +	chr3L_14_3830001	chr3L_3830001	SF447_1-HE
1188	chr3L	4328717	4328751	chr3L	4336241	4336275	412	8	7524	7.5	2.0	4.8	1.4	7558	chr3L	4328717	intron	Cip4 -	chr3L	4332496	intron	Cip4 -	chr3L	4336275	exon	Cip4 -	chr3L_8_4330001	chr3L_4330001	SF447_1-HE
1209	chr3L	5034136	5034191	chr3L	5043314	5043358	roo	11	9176	4.0	3.0	3.5	2.4	9222	chr3L	5034136	intron	Con -	chr3L	5038747	intron	Con -	chr3L	5043358	intron	Con -	chr3L_11_5035001	chr3L_5035001	SF447_1-HE
1210	chr3L	5045441	5045481	chr3L	5050248	5050288	Doc	5	4807	0.5	3.5	2.0	1.7	4847	chr3L	5045441	intron	Con -	chr3L	5047864	intron	Con -	chr3L	5050288	intron	Con -	chr3L_5_5045001	chr3L_5045001	SF447_1-HE
1242	chr3L	5910008	5910024	chr3L	5910275	5910291	pogo	4	267	2.5	0.0	1.2	1.8	283	chr3L	5910008	intron	CG13288 +	chr3L	5910150	intron	CG13288 +	chr3L	5910291	intron	CG13288 +	chr3L_4_5910001	chr3L_5910001	SF447_1-HE
1243	chr3L	5926304	5926341	chr3L	5926520	5926547	BS	5	214	1.5	4.0	2.8	1.3	243	chr3L	5926304	intron	Vap-33B +	chr3L	5926426	intron	Vap-33B +	chr3L	5926547	intron	Vap-33B +	chr3L_5_5925001	chr3L_5925001	SF447_1-HE
1246	chr3L	6001671	6001711	chr3L	6004397	6004437	jockey	5	2726	6.5	2.5	4.5	0.9	2766	chr3L	6001671	intron	PVRAP +	chr3L	6003054	intron	PVRAP +	chr3L	6004437	intron	PVRAP +	chr3L_5_6000001	chr3L_6000001	SF447_1-HE
1248	chr3L	6040340	6040387	chr3L	6042722	6042769	Doc	6	2381	1.5	3.0	2.2	1.9	2429	chr3L	6040340	intergenic	Jon65Aiv +	chr3L	6041554	intergenic	not near genes	chr3L	6042769	intergenic	not near genes	chr3L_6_6040001	chr3L_6040001	SF447_1-HE
1254	chr3L	6220889	6220942	chr3L	6230067	6230120	roo	6	9178	1.5	2.0	1.8	2.1	9231	chr3L	6220889	5` UTR	pncr008:3L +	chr3L	6225504	intergenic	not near genes	chr3L	6230120	intergenic	not near genes	chr3L_6_6225001	chr3L_6225001	SF447_1-HE
1255	chr3L	6334987	6335031	chr3L	6335484	6335514	297	7	495	3.5	3.5	3.5	1.6	527	chr3L	6334987	intron	CG13300 -	chr3L	6335250	intron	CG13300 -	chr3L	6335514	intron	CG13300 -	chr3L_7_6335001	chr3L_6335001	SF447_1-HE
1262	chr3L	6620586	6620603	chr3L	6621052	6621069	Rt1c	5	465	2.0	7.0	4.5	0.9	483	chr3L	6620586	intergenic	not near genes	chr3L	6620828	intergenic	not near genes	chr3L	6621069	intergenic	not near genes	chr3L_5_6620001	chr3L_6620001	SF447_1-HE
1265	chr3L	6781100	6781152	chr3L	6783139	6783188	Doc	7	2037	3.5	0.0	1.8	2.5	2088	chr3L	6781100	intergenic	not near genes	chr3L	6782144	intergenic	not near genes	chr3L	6783188	intergenic	not near genes	chr3L_7_6780001	chr3L_6780001	SF447_1-HE
1268	chr3L	6855917	6855953	chr3L	6860726	6860763	Doc	12	4807	2.0	6.0	4.0	2.4	4846	chr3L	6855917	intergenic	not near genes	chr3L	6858340	intergenic	not near genes	chr3L	6860763	intergenic	not near genes	chr3L_12_6855001	chr3L_6855001	SF447_1-HE
1269	chr3L	6887490	6887530	chr3L	6895008	6895048	roo	6	7518	2.5	0.0	1.2	2.7	7558	chr3L	6887490	intergenic	not near genes	chr3L	6891269	intergenic	not near genes	chr3L	6895048	intergenic	not near genes	chr3L_6_6890001	chr3L_6890001	SF447_1-HE
1272	chr3L	6994886	6994905	chr3L	6995523	6995542	BS	5	636	0.5	4.5	2.5	1.4	656	chr3L	6994886	intergenic	bin +	chr3L	6995214	intergenic	not near genes	chr3L	6995542	intergenic	not near genes	chr3L_5_6995001	chr3L_6995001	SF447_1-HE
1287	chr3L	7498762	7498783	chr3L	7503543	7503579	F-element	6	4798	5.0	3.5	4.2	1.2	4817	chr3L	7498762	5` UTR	CG8539 -	chr3L	7501170	intergenic	not near genes	chr3L	7503579	intergenic	not near genes	chr3L_6_7500001	chr3L_7500001	SF447_1-HE
1293	chr3L	7793695	7793738	chr3L	7800773	7800812	297	13	7078	4.0	5.5	4.8	2.2	7117	chr3L	7793695	intron	CG32369 -	chr3L	7797254	intron	CG32369 -	chr3L	7800812	intron	CG32369 -	chr3L_13_7795001	chr3L_7795001	SF447_1-HE
1297	chr3L	7886491	7886537	chr3L	7889035	7889082	Stalker4	13	2542	3.5	2.5	3.0	3.2	2591	chr3L	7886491	intron	CG32365 +	chr3L	7887786	intron	CG32365 +	chr3L	7889082	intron	CG32365 +	chr3L_13_7885001	chr3L_7885001	SF447_1-HE
1298	chr3L	7916810	7916842	chr3L	7926007	7926032	roo	5	9194	3.0	3.5	3.2	1.2	9222	chr3L	7916810	3` UTR	syd -	chr3L	7921421	intron	syd -	chr3L	7926032	3` UTR	syd -	chr3L_5_7920001	chr3L_7920001	SF447_1-HE
1300	chr3L	7985350	7985390	chr3L	7987705	7987745	NOF	6	2355	3.0	3.5	3.2	1.4	2395	chr3L	7985350	intron	nmo +	chr3L	7986548	intron	nmo +	chr3L	7987745	intron	nmo +	chr3L_6_7985001	chr3L_7985001	SF447_1-HE
1309	chr3L	8233566	8233585	chr3L	8238854	8238872	Rt1a	10	5288	9.0	10.5	9.8	0.9	5306	chr3L	8233566	intron	CG7213 -	chr3L	8236219	intron	CG7213 -	chr3L	8238872	intron,intron	CG7213 -,Dscam4 +	chr3L_10_8235001	chr3L_8235001	SF447_1-HE
1327	chr3L	9076908	9076960	chr3L	9084494	9084546	412	9	7586	7.5	5.0	6.2	1.2	7638	chr3L	9076908	exon	Tequila +	chr3L	9080727	intron	Tequila +	chr3L	9084546	exon	Tequila +	chr3L_9_9080001	chr3L_9080001	SF447_1-HE
1328	chr3L	9130536	9130580	chr3L	9134323	9134367	412	22	3786	10.5	7.0	8.8	2.2	3831	chr3L	9130536	intergenic	bol -	chr3L	9132452	intergenic	not near genes	chr3L	9134367	intergenic	Dhpr +	chr3L_22_9130001	chr3L_9130001	SF447_1-HE
1329	chr3L	9164681	9164705	chr3L	9166173	9166198	hobo	14	1493	13.5	0.0	6.8	1.8	1517	chr3L	9164681	intron	Rdl -	chr3L	9165440	intron	Rdl -	chr3L	9166198	intron	Rdl -	chr3L_14_9165001	chr3L_9165001	SF447_1-HE
1331	chr3L	9219219	9219270	chr3L	9219914	9219968	jockey	21	698	10.0	6.5	8.2	2.3	749	chr3L	9219219	intergenic	not near genes	chr3L	9219594	intergenic	not near genes	chr3L	9219968	intergenic	not near genes	chr3L_21_9215001	chr3L_9215001	SF447_1-HE
1332	chr3L	9270591	9270647	chr3L	9278372	9278393	roo	8	7771	3.5	4.0	3.8	1.7	7802	chr3L	9270591	intron	GluRIB +	chr3L	9274492	intron	GluRIB +	chr3L	9278393	exon	GluRIB +	chr3L_8_9270001	chr3L_9270001	SF447_1-HE
1336	chr3L	9443502	9443538	chr3L	9445319	9445355	S-element	4	1817	1.0	3.5	2.2	1.2	1853	chr3L	9443502	intron	CG33926 +	chr3L	9444428	intron	CG33926 +	chr3L	9445355	intron	CG33926 +	chr3L_4_9440001	chr3L_9440001	SF447_1-HE
1337	chr3L	9501710	9501734	chr3L	9502219	9502243	roo	4	509	1.0	3.0	2.0	1.3	533	chr3L	9501710	intron	path -	chr3L	9501976	intron	path -	chr3L	9502243	intron	path -	chr3L_4_9500001	chr3L_9500001	SF447_1-HE
1338	chr3L	9533731	9533781	chr3L	9541317	9541367	412	11	7586	5.5	3.5	4.5	2.0	7636	chr3L	9533731	intergenic	not near genes	chr3L	9537549	intergenic	not near genes	chr3L	9541367	intergenic	not near genes	chr3L_11_9535001	chr3L_9535001	SF447_1-HE
1339	chr3L	9575890	9575942	chr3L	9580989	9581001	jockey	9	5097	4.5	4.0	4.2	1.7	5111	chr3L	9575890	intron	CG42673 +	chr3L	9578446	intron	CG42673 +	chr3L	9581001	intron	CG42673 +	chr3L_9_9575001	chr3L_9575001	SF447_1-HE
1354	chr3L	9929647	9929693	chr3L	9938453	9938499	roo	13	8803	6.0	7.0	6.5	1.7	8852	chr3L	9929647	intron	CG34356 +	chr3L	9934073	intron	CG34356 +	chr3L	9938499	intron	CG34356 +	chr3L_13_9930001	chr3L_9930001	SF447_1-HE
1376	chr3L	10414931	10414963	chr3L	10417329	10417361	Doc	5	2398	3.0	4.5	3.8	1.0	2430	chr3L	10414931	intergenic	CG12362 +	chr3L	10416146	intergenic	not near genes	chr3L	10417361	intergenic	not near genes	chr3L_5_10415001	chr3L_10415001	SF447_1-HE
1398	chr3L	11087014	11087089	chr3L	11088846	11088900	S-element	9	1819	0.0	1.5	0.8	5.0	1886	chr3L	11087014	intron	JIL-1 -	chr3L	11087957	intron	JIL-1 -	chr3L	11088900	intron	JIL-1 -	chr3L_9_11085001	chr3L_11085001	SF447_1-HE
1402	chr3L	11277445	11277474	chr3L	11278466	11278492	Rt1a	9	1019	0.0	4.0	2.0	3.0	1047	chr3L	11277445	intergenic	not near genes	chr3L	11277968	intergenic	not near genes	chr3L	11278492	intergenic	not near genes	chr3L_9_11275001	chr3L_11275001	SF447_1-HE
1405	chr3L	11329669	11329721	chr3L	11332900	11332951	jockey	8	3230	2.0	5.0	3.5	1.8	3282	chr3L	11329669	intergenic	not near genes	chr3L	11331310	intergenic	not near genes	chr3L	11332951	intergenic	not near genes	chr3L_8_11330001	chr3L_11330001	SF447_1-HE
1415	chr3L	11723077	11723108	chr3L	11727898	11727929	Doc	10	4821	3.0	2.5	2.8	2.6	4852	chr3L	11723077	3` UTR	Bmcp +	chr3L	11725503	intron	Bmcp +	chr3L	11727929	3` UTR	Bmcp +	chr3L_10_11725001	chr3L_11725001	SF447_1-HE
1424	chr3L	11864528	11864581	chr3L	11865849	11865902	pogo	13	1321	4.0	4.5	4.2	2.5	1374	chr3L	11864528	intron	CG44837 -	chr3L	11865215	intron	CG44837 -	chr3L	11865902	intron	CG44837 -	chr3L_13_11865001	chr3L_11865001	SF447_1-HE
1448	chr3L	12874911	12874955	chr3L	12877228	12877273	jockey	15	2318	2.0	5.0	3.5	3.3	2362	chr3L	12874911	intergenic	not near genes	chr3L	12876092	intergenic	not near genes	chr3L	12877273	intergenic	not near genes	chr3L_15_12875001	chr3L_12875001	SF447_1-HE
1450	chr3L	12919264	12919278	chr3L	12924748	12924770	Rt1c	4	5492	5.0	0.0	2.5	1.1	5506	chr3L	12919264	intergenic	not near genes	chr3L	12922017	intergenic	not near genes	chr3L	12924770	intergenic	not near genes	chr3L_4_12920001	chr3L_12920001	SF447_1-HE
1451	chr3L	12957764	12957819	chr3L	12962272	12962320	copia	6	4507	1.5	2.5	2.0	2.0	4556	chr3L	12957764	intergenic	not near genes	chr3L	12960042	intergenic	not near genes	chr3L	12962320	intergenic	not near genes	chr3L_6_12960001	chr3L_12960001	SF447_1-HE
1463	chr3L	13525167	13525184	chr3L	13532989	13533006	roo	6	7822	6.5	9.5	8.0	0.7	7839	chr3L	13525167	intergenic	not near genes	chr3L	13529086	intergenic	not near genes	chr3L	13533006	intergenic	not near genes	chr3L_6_13525001	chr3L_13525001	SF447_1-HE
1471	chr3L	13804518	13804567	chr3L	13822830	13822879	roo	19	18311	7.5	6.0	6.8	2.4	18361	chr3L	13804518	intergenic	not near genes	chr3L	13813698	intergenic	not near genes	chr3L	13822879	intergenic	not near genes	chr3L_19_13810001	chr3L_13810001	SF447_1-HE
1487	chr3L	14245552	14245588	chr3L	14245663	14245708	1360	15	119	8.5	3.5	6.0	2.1	156	chr3L	14245552	3` UTR	CR44561 -	chr3L	14245630	3` UTR	CR44561 -	chr3L	14245708	intergenic	CR44561 -,CR44560 +	chr3L_15_14245001	chr3L_14245001	SF447_1-HE
1488	chr3L	14267355	14267375	chr3L	14271819	14271841	F-element	5	4466	5.5	5.5	5.5	0.8	4486	chr3L	14267355	intergenic	not near genes	chr3L	14269598	intergenic	not near genes	chr3L	14271841	intergenic	not near genes	chr3L_5_14265001	chr3L_14265001	SF447_1-HE
1490	chr3L	14295960	14295968	chr3L	14296472	14296478	roo	5	511	11.5	0.0	5.8	0.7	518	chr3L	14295960	intron	fz +	chr3L	14296219	intron	fz +	chr3L	14296478	intron	fz +	chr3L_5_14295001	chr3L_14295001	SF447_1-HE
1491	chr3L	14295977	14296016	chr3L	14296468	14296537	roo	18	518	7.0	0.0	3.5	4.0	560	chr3L	14295977	intron	fz +	chr3L	14296257	intron	fz +	chr3L	14296537	intron	fz +	chr3L_18_14295001	chr3L_14295001	SF447_1-HE
1492	chr3L	14311997	14312051	chr3L	14316837	14316890	X-element	13	4838	2.5	8.0	5.2	2.1	4893	chr3L	14311997	exon	fz +	chr3L	14314444	intron	fz +	chr3L	14316890	intron	fz +	chr3L_13_14310001	chr3L_14310001	SF447_1-HE
1499	chr3L	14468426	14468476	chr3L	14473658	14473708	copia	19	5232	6.5	9.0	7.8	2.2	5282	chr3L	14468426	intron	bbg -	chr3L	14471067	intron	bbg -	chr3L	14473708	intron	bbg -	chr3L_19_14470001	chr3L_14470001	SF447_1-HE
1505	chr3L	14721163	14721203	chr3L	14723031	14723072	Rt1c	10	1868	8.5	7.0	7.8	1.1	1909	chr3L	14721163	intron	ome +	chr3L	14722118	intron	ome +	chr3L	14723072	intron	ome +	chr3L_10_14720001	chr3L_14720001	SF447_1-HE
1507	chr3L	14725579	14725615	chr3L	14728599	14728635	Doc	10	3017	0.0	3.0	1.5	4.0	3056	chr3L	14725579	intron	ome +	chr3L	14727107	intron	ome +	chr3L	14728635	intron	ome +	chr3L_10_14725001	chr3L_14725001	SF447_1-HE
1520	chr3L	14954351	14954356	chr3L	14956062	14956067	transib2	5	1711	0.0	0.0	0.0	5.0	1716	chr3L	14954351	intergenic	not near genes	chr3L	14955209	intergenic	not near genes	chr3L	14956067	intergenic	not near genes	chr3L_5_14955001	chr3L_14955001	SF447_1-HE
1523	chr3L	15085023	15085084	chr3L	15086215	15086276	1360	8	1191	1.0	0.5	0.8	4.4	1253	chr3L	15085023	intron	cp309 -	chr3L	15085650	intron	cp309 -	chr3L	15086276	intron	cp309 -	chr3L_8_15085001	chr3L_15085001	SF447_1-HE
1528	chr3L	15295741	15295773	chr3L	15298610	15298642	gypsy5	6	2869	7.0	3.0	5.0	1.0	2901	chr3L	15295741	intergenic	not near genes	chr3L	15297192	intergenic	not near genes	chr3L	15298642	intergenic	Best4 +	chr3L_6_15295001	chr3L_15295001	SF447_1-HE
1535	chr3L	15423737	15423780	chr3L	15426607	15426650	opus	5	2870	6.5	3.5	5.0	0.8	2913	chr3L	15423737	intergenic	not near genes	chr3L	15425194	intergenic	not near genes	chr3L	15426650	intergenic	not near genes	chr3L_5_15425001	chr3L_15425001	SF447_1-HE
1540	chr3L	15554898	15554947	chr3L	15556711	15556760	S-element	10	1812	1.5	2.5	2.0	3.3	1862	chr3L	15554898	intron	AGO2 +	chr3L	15555829	intron	AGO2 +	chr3L	15556760	intron	AGO2 +	chr3L_10_15555001	chr3L_15555001	SF447_1-HE
1552	chr3L	15899203	15899258	chr3L	15899795	15899851	jockey	9	585	2.0	4.5	3.2	2.1	648	chr3L	15899203	intergenic	pHCl -	chr3L	15899527	intergenic	pHCl -	chr3L	15899851	intergenic	sff -	chr3L_9_15895001	chr3L_15895001	SF447_1-HE
1553	chr3L	15929173	15929226	chr3L	15938342	15938399	roo	4	9170	0.0	3.0	1.5	1.6	9226	chr3L	15929173	intron	Pka-C3 -	chr3L	15933786	intron	Pka-C3 -	chr3L	15938399	intron	Pka-C3 -	chr3L_4_15930001	chr3L_15930001	SF447_1-HE
1556	chr3L	16184085	16184134	chr3L	16188930	16188979	X-element	18	4844	3.0	5.5	4.2	3.5	4894	chr3L	16184085	intergenic	not near genes	chr3L	16186532	intergenic	not near genes	chr3L	16188979	intergenic	not near genes	chr3L_18_16185001	chr3L_16185001	SF447_1-HE
1561	chr3L	16443840	16443879	chr3L	16446189	16446245	Doc	19	2365	2.5	8.0	5.2	3.1	2405	chr3L	16443840	intron,intron	CG33158 +,dsx-c73A -	chr3L	16445042	intron,intron	CG33158 +,dsx-c73A -	chr3L	16446245	intron,intron	CG33158 +,dsx-c73A -	chr3L_19_16445001	chr3L_16445001	SF447_1-HE
1564	chr3L	16493962	16494007	chr3L	16494500	16494549	jockey	9	541	3.0	8.5	5.8	1.3	587	chr3L	16493962	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L	16494256	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L	16494549	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L_9_16490001	chr3L_16490001	SF447_1-HE
1579	chr3L	16945704	16945745	chr3L	16954883	16954920	roo	14	9177	6.5	1.5	4.0	2.8	9216	chr3L	16945704	exon	Obp73a +	chr3L	16950312	intergenic	not near genes	chr3L	16954920	5` UTR	Nc73EF +	chr3L_14_16950001	chr3L_16950001	SF447_1-HE
1583	chr3L	17084981	17085026	chr3L	17094156	17094201	roo	38	9174	16.5	10.0	13.2	2.7	9220	chr3L	17084981	intron	Rbp6 -	chr3L	17089591	intron	Rbp6 -	chr3L	17094201	intron	Rbp6 -	chr3L_38_17085001	chr3L_17085001	SF447_1-HE
1593	chr3L	17516959	17517007	chr3L	17524543	17524591	412	7	7584	3.5	4.0	3.8	1.5	7632	chr3L	17516959	intron	CG7564 +	chr3L	17520775	intron	CG7564 +	chr3L	17524591	3` UTR	CG7564 +	chr3L_7_17520001	chr3L_17520001	SF447_1-HE
1600	chr3L	17799793	17799839	chr3L	17801606	17801652	S-element	7	1813	2.5	1.0	1.8	2.5	1859	chr3L	17799793	intron	NUCB1 -	chr3L	17800722	intron	NUCB1 -	chr3L	17801652	intron	NUCB1 -	chr3L_7_17800001	chr3L_17800001	SF447_1-HE
1605	chr3L	18047694	18047729	chr3L	18056777	18056812	roo	5	9083	1.5	4.5	3.0	1.2	9118	chr3L	18047694	intron	Eip75B -	chr3L	18052253	intron	Eip75B -	chr3L	18056812	intron	Eip75B -	chr3L_5_18050001	chr3L_18050001	SF447_1-HE
1612	chr3L	18189574	18189585	chr3L	18190193	18190204	S-element	7	619	8.5	2.5	5.5	1.1	630	chr3L	18189574	intergenic	not near genes	chr3L	18189889	intergenic	not near genes	chr3L	18190204	intergenic	not near genes	chr3L_7_18185001	chr3L_18185001	SF447_1-HE
1629	chr3L	18506115	18506133	chr3L	18509604	18509622	F-element	6	3489	14.5	0.0	7.2	0.7	3507	chr3L	18506115	intergenic	not near genes	chr3L	18507868	intergenic	not near genes	chr3L	18509622	intergenic	not near genes	chr3L_6_18505001	chr3L_18505001	SF447_1-HE
1630	chr3L	18506143	18506157	chr3L	18509593	18509646	F-element	9	3484	10.0	0.0	5.0	1.5	3503	chr3L	18506143	intergenic	not near genes	chr3L	18507894	intergenic	not near genes	chr3L	18509646	intergenic	not near genes	chr3L_9_18505001	chr3L_18505001	SF447_1-HE
1631	chr3L	18514906	18514920	chr3L	18520123	18520137	BS	4	5217	1.0	6.5	3.8	0.8	5231	chr3L	18514906	intergenic	not near genes	chr3L	18517522	intergenic	not near genes	chr3L	18520137	intergenic	not near genes	chr3L_4_18515001	chr3L_18515001	SF447_1-HE
1632	chr3L	18528613	18528657	chr3L	18537822	18537866	roo	13	9210	3.5	0.0	1.8	4.6	9253	chr3L	18528613	intergenic	not near genes	chr3L	18533240	intergenic	not near genes	chr3L	18537866	intergenic	not near genes	chr3L_13_18530001	chr3L_18530001	SF447_1-HE
1635	chr3L	18593924	18593957	chr3L	18595929	18595963	Doc	13	2006	6.5	1.0	3.8	2.7	2039	chr3L	18593924	intergenic	term -	chr3L	18594944	intergenic	not near genes	chr3L	18595963	intergenic	CR45389 +	chr3L_13_18590001	chr3L_18590001	SF447_1-HE
1638	chr3L	18710747	18710788	chr3L	18718725	18718766	Stalker2	12	7978	2.5	7.0	4.8	2.1	8019	chr3L	18710747	intergenic	not near genes	chr3L	18714756	intergenic	not near genes	chr3L	18718766	intergenic	not near genes	chr3L_12_18710001	chr3L_18710001	SF447_1-HE
1642	chr3L	18772384	18772427	chr3L	18781091	18781134	roo	10	8706	6.5	2.5	4.5	1.8	8750	chr3L	18772384	intron	ftz-f1 -	chr3L	18776759	intron	ftz-f1 -	chr3L	18781134	intron	ftz-f1 -	chr3L_10_18775001	chr3L_18775001	SF447_1-HE
1647	chr3L	18833763	18833806	chr3L	18834953	18834996	1360	5	1190	5.5	3.0	4.2	1.0	1233	chr3L	18833763	intron	Indy -	chr3L	18834380	intron	Indy -	chr3L	18834996	intron	Indy -	chr3L_5_18830001	chr3L_18830001	SF447_1-HE
1654	chr3L	19008830	19008861	chr3L	19009194	19009225	jockey	11	363	3.0	4.5	3.8	2.3	395	chr3L	19008830	intron	nkd -	chr3L	19009028	intron	nkd -	chr3L	19009225	intron	nkd -	chr3L_11_19005001	chr3L_19005001	SF447_1-HE
1659	chr3L	19115615	19115663	chr3L	19115821	19115869	BS	7	206	4.0	3.0	3.5	1.6	254	chr3L	19115615	intron	CG14082 -	chr3L	19115742	intron	CG14082 -	chr3L	19115869	intron	CG14082 -	chr3L_7_19115001	chr3L_19115001	SF447_1-HE
1660	chr3L	19117018	19117066	chr3L	19124491	19124539	mdg1	13	7472	3.5	4.0	3.8	2.7	7521	chr3L	19117018	intron	CG14082 -	chr3L	19120778	intron	CG14082 -	chr3L	19124539	intron	CG14082 -	chr3L_13_19120001	chr3L_19120001	SF447_1-HE
1662	chr3L	19208037	19208085	chr3L	19209435	19209485	Doc	9	1400	5.5	5.0	5.2	1.5	1448	chr3L	19208037	intron	fz2 -	chr3L	19208761	intron	fz2 -	chr3L	19209485	intron	fz2 -	chr3L_9_19205001	chr3L_19205001	SF447_1-HE
1666	chr3L	19398913	19398927	chr3L	19403656	19403670	F-element	6	4743	2.5	5.0	3.8	1.2	4757	chr3L	19398913	intron	CG32206 -	chr3L	19401292	intron	CG32206 -	chr3L	19403670	intron	CG32206 -	chr3L_6_19400001	chr3L_19400001	SF447_1-HE
1675	chr3L	20113634	20113671	chr3L	20122917	20122954	roo	5	9283	1.0	2.0	1.5	2.0	9320	chr3L	20113634	intergenic	not near genes	chr3L	20118294	intergenic	not near genes	chr3L	20122954	intergenic	not near genes	chr3L_5_20115001	chr3L_20115001	SF447_1-HE
1680	chr3L	20257315	20257363	chr3L	20258461	20258509	pogo	11	1144	2.5	3.0	2.8	2.9	1194	chr3L	20257315	intron	rdgC +	chr3L	20257912	intron	rdgC +	chr3L	20258509	intron	rdgC +	chr3L_11_20255001	chr3L_20255001	SF447_1-HE
1685	chr3L	20590042	20590096	chr3L	20590606	20590639	412	18	563	3.5	4.5	4.0	3.6	597	chr3L	20590042	intergenic	not near genes	chr3L	20590340	intergenic	not near genes	chr3L	20590639	intergenic	not near genes	chr3L_18_20590001	chr3L_20590001	SF447_1-HE
1692	chr3L	21014889	21014903	chr3L	21023396	21023408	Tirant	8	8506	17.0	6.5	11.8	0.6	8519	chr3L	21014889	intron	skd -	chr3L	21019148	intron	skd -	chr3L	21023408	intron	skd -	chr3L_8_21015001	chr3L_21015001	SF447_1-HE
1693	chr3L	21014905	21014946	chr3L	21023395	21023453	Tirant	20	8502	8.5	6.0	7.2	2.4	8548	chr3L	21014905	intron	skd -	chr3L	21019179	intron	skd -	chr3L	21023453	intron	skd -	chr3L_20_21015001	chr3L_21015001	SF447_1-HE
1695	chr3L	21151842	21151893	chr3L	21156952	21157003	flea	12	5109	1.5	1.5	1.5	4.8	5161	chr3L	21151842	intron	Ac78C -	chr3L	21154422	intron	Ac78C -	chr3L	21157003	intron	Ac78C -	chr3L_12_21150001	chr3L_21150001	SF447_1-HE
1697	chr3L	21306123	21306173	chr3L	21315308	21315358	roo	8	9185	3.0	1.0	2.0	2.7	9235	chr3L	21306123	3` UTR	CG7632 +	chr3L	21310740	intron	Pc -	chr3L	21315358	3` UTR	Pc -	chr3L_8_21310001	chr3L_21310001	SF447_1-HE
1698	chr3L	21372707	21372746	chr3L	21379241	21379280	McClintock	5	6534	1.5	3.0	2.2	1.6	6573	chr3L	21372707	intergenic	not near genes	chr3L	21375994	intergenic	not near genes	chr3L	21379280	intergenic	not near genes	chr3L_5_21375001	chr3L_21375001	SF447_1-HE
1700	chr3L	21498826	21498842	chr3L	21500488	21500504	1360	5	1661	5.5	3.5	4.5	0.9	1678	chr3L	21498826	5` UTR,intron	CR43933 +,Glg1 -	chr3L	21499665	intron	Glg1 -	chr3L	21500504	intron	Glg1 -	chr3L_5_21495001	chr3L_21495001	SF447_1-HE
1701	chr3L	21501145	21501163	chr3L	21501265	21501283	1360	6	120	2.0	4.5	3.2	1.4	138	chr3L	21501145	intron	Glg1 -	chr3L	21501214	intron	Glg1 -	chr3L	21501283	intron	Glg1 -	chr3L_6_21500001	chr3L_21500001	SF447_1-HE
1704	chr3L	21749306	21749326	chr3L	21754492	21754512	Doc	4	5186	4.5	3.5	4.0	0.8	5206	chr3L	21749306	intron	Syn1 -	chr3L	21751909	intron	Syn1 -	chr3L	21754512	intron	Syn1 -	chr3L_4_21750001	chr3L_21750001	SF447_1-HE
1709	chr3L	22099672	22099686	chr3L	22105874	22105898	3S18	6	6209	4.5	4.0	4.2	1.2	6226	chr3L	22099672	intergenic	not near genes	chr3L	22102785	intergenic	not near genes	chr3L	22105898	intergenic	not near genes	chr3L_6_22100001	chr3L_22100001	SF447_1-HE
1710	chr3L	22099689	22099701	chr3L	22105901	22105913	3S18	5	6212	4.5	6.5	5.5	0.8	6224	chr3L	22099689	intergenic	not near genes	chr3L	22102801	intergenic	not near genes	chr3L	22105913	intergenic	not near genes	chr3L_5_22100001	chr3L_22100001	SF447_1-HE
1725	chr3L	22555753	22555797	chr3L	22563249	22563290	blood	11	7495	3.5	3.5	3.5	2.4	7537	chr3L	22555753	intergenic	not near genes	chr3L	22559522	intergenic	not near genes	chr3L	22563290	intergenic	not near genes	chr3L_11_22555001	chr3L_22555001	SF447_1-HE
1727	chr3L	22577611	22577645	chr3L	22582425	22582459	Doc	10	4814	4.5	5.0	4.8	1.7	4848	chr3L	22577611	intergenic	not near genes	chr3L	22580035	intergenic	not near genes	chr3L	22582459	3` UTR	CG14459 -	chr3L_10_22580001	chr3L_22580001	SF447_1-HE
1728	chr3L	22617171	22617214	chr3L	22624649	22624692	blood	11	7478	2.5	4.5	3.5	2.4	7521	chr3L	22617171	intron	CG14459 -	chr3L	22620932	intron	CG14459 -	chr3L	22624692	intron	CG14459 -	chr3L_11_22620001	chr3L_22620001	SF447_1-HE
1733	chr3L	22761363	22761417	chr3L	22766823	22766876	Ivk	25	5460	6.0	6.0	6.0	3.6	5513	chr3L	22761363	intron	SPoCk +	chr3L	22764120	intron	SPoCk +	chr3L	22766876	intron	SPoCk +	chr3L_25_22760001	chr3L_22760001	SF447_1-HE
1740	chr3L	22989838	22989892	chr3L	22996838	22996892	297	7	6999	2.0	2.0	2.0	2.3	7054	chr3L	22989838	intergenic	not near genes	chr3L	22993365	intergenic	not near genes	chr3L	22996892	intergenic	not near genes	chr3L_7_22990001	chr3L_22990001	SF447_1-HE
1749	chr3L	23665511	23665523	chr3L	23665627	23665639	gypsy8	10	116	22.0	20.5	21.2	0.5	128	chr3L	23665511	intron	AGO3 +	chr3L	23665575	intron	AGO3 +	chr3L	23665639	intron	AGO3 +	chr3L_10_23665001	chr3L_23665001	SF447_1-HE
1752	chr3L	24012387	24012425	chr3L	24020754	24020790	roo	5	8367	1.0	2.5	1.8	1.8	8403	chr3L	24012387	intergenic	not near genes	chr3L	24016588	intergenic	not near genes	chr3L	24020790	intergenic	not near genes	chr3L_5_24015001	chr3L_24015001	SF447_1-HE
1753	chr3L	24021252	24021314	chr3L	24022435	24022497	1360	12	1182	2.0	1.0	1.5	4.8	1245	chr3L	24021252	intergenic	not near genes	chr3L	24021874	intergenic	not near genes	chr3L	24022497	intergenic	not near genes	chr3L_12_24020001	chr3L_24020001	SF447_1-HE
1755	chr3L	24168765	24168821	chr3L	24176119	24176175	ZAM	20	7353	7.0	11.5	9.2	2.0	7410	chr3L	24168765	intron	Snap25 +	chr3L	24172470	intron	Snap25 +	chr3L	24176175	intron	Snap25 +	chr3L_20_24170001	chr3L_24170001	SF447_1-HE
1758	chr3L	24791869	24791911	chr3L	24796674	24796716	Doc	11	4805	6.0	3.5	4.8	1.9	4847	chr3L	24791869	intergenic	not near genes	chr3L	24794292	intergenic	not near genes	chr3L	24796716	intergenic	not near genes	chr3L_11_24790001	chr3L_24790001	SF447_1-HE
1765	chr3L	25628483	25628523	chr3L	25633278	25633320	F-element	12	4797	10.0	6.5	8.2	1.3	4837	chr3L	25628483	intron	CG41343 -	chr3L	25630902	intron	CG41343 -	chr3L	25633320	intron	CG41343 -	chr3L_12_25630001	chr3L_25630001	SF447_1-HE
1766	chr3L	25824653	25824658	chr3L	27273496	27273501	F-element	6	1448842	55.0	25.0	40.0	0.1	1448848	chr3L	25824653	intron	CG40178 -	chr3L	26549077	intergenic	not near genes	chr3L	27273501	intergenic	not near genes	chr3L_6_26545001	chr3L_26545001	SF447_1-HE
1774	chr3L	27727616	27727659	chr3L	27728748	27728781	G-element	7	1131	3.0	5.5	4.2	1.3	1165	chr3L	27727616	intergenic	not near genes	chr3L	27728198	intergenic	not near genes	chr3L	27728781	intergenic	not near genes	chr3L_7_27725001	chr3L_27725001	SF447_1-HE
1776	chr3L	27980673	27980727	chr3L	27985497	27985551	Doc	10	4824	2.5	2.0	2.2	3.1	4878	chr3L	27980673	intron	CG17514 -	chr3L	27983112	intron	CG17514 -	chr3L	27985551	intron	CG17514 -	chr3L_10_27980001	chr3L_27980001	SF447_1-HE
1786	chr3R	4366733	4366791	chr3R	4375142	4375181	roo	7	8406	3.5	1.0	2.2	2.2	8448	chr3R	4366733	3` UTR	CG1090 +	chr3R	4370957	intergenic	not near genes	chr3R	4375181	5` UTR	CR44922 +	chr3R_7_4370001	chr3R_4370001	SF447_1-HE
1788	chr3R	4408416	4408439	chr3R	4412709	4412756	Juan	6	4314	2.5	1.5	2.0	2.0	4340	chr3R	4408416	intron	CG32944 -	chr3R	4410586	intron	CG32944 -	chr3R	4412756	intron	CG32944 -	chr3R_6_4410001	chr3R_4410001	SF447_1-HE
1793	chr3R	4609526	4609575	chr3R	4610716	4610765	1360	14	1188	6.5	8.0	7.2	1.7	1239	chr3R	4609526	intergenic	not near genes	chr3R	4610146	intergenic	not near genes	chr3R	4610765	intergenic	not near genes	chr3R_14_4610001	chr3R_4610001	SF447_1-HE
1797	chr3R	4683152	4683209	chr3R	4684937	4684994	S-element	25	1784	7.5	9.5	8.5	2.6	1842	chr3R	4683152	intron	CG43427 +	chr3R	4684073	intron	CG43427 +	chr3R	4684994	intron	CG43427 +	chr3R_25_4680001	chr3R_4680001	SF447_1-HE
1799	chr3R	4753219	4753258	chr3R	4757548	4757550	F-element	8	4324	5.5	6.0	5.8	1.2	4331	chr3R	4753219	intron,intron	atms +,CG44098 -	chr3R	4755384	intron,intron	atms +,CG44098 -	chr3R	4757550	intron,exon	atms +,CG44098 -	chr3R_8_4755001	chr3R_4755001	SF447_1-HE
1800	chr3R	4759703	4759741	chr3R	4761226	4761264	hopper2	7	1522	3.0	6.0	4.5	1.3	1561	chr3R	4759703	intron,intron	atms +,CG44098 -	chr3R	4760484	intron,intron	atms +,CG44098 -	chr3R	4761264	intron,intron	atms +,CG44098 -	chr3R_7_4760001	chr3R_4760001	SF447_1-HE
1808	chr3R	5045824	5045864	chr3R	5052952	5052992	HMS-Beagle	7	7128	3.0	2.5	2.8	1.8	7168	chr3R	5045824	3` UTR	CR43635 -	chr3R	5049408	intergenic	not near genes	chr3R	5052992	intergenic	CR45588 -	chr3R_7_5045001	chr3R_5045001	SF447_1-HE
1809	chr3R	5067957	5068007	chr3R	5073500	5073550	mdg3	13	5542	2.5	1.0	1.8	4.6	5593	chr3R	5067957	intergenic	not near genes	chr3R	5070754	intergenic	not near genes	chr3R	5073550	intergenic	not near genes	chr3R_13_5070001	chr3R_5070001	SF447_1-HE
1816	chr3R	5338375	5338418	chr3R	5343578	5343621	Rt1c	20	5202	9.5	10.0	9.8	1.9	5246	chr3R	5338375	intron	mtd -	chr3R	5340998	intron	mtd -	chr3R	5343621	intron	mtd -	chr3R_20_5340001	chr3R_5340001	SF447_1-HE
1817	chr3R	5445934	5445993	chr3R	5452420	5452479	Burdock	6	6486	1.0	1.5	1.2	2.7	6545	chr3R	5445934	intron	CG14669 +	chr3R	5449206	intron	CG14669 +	chr3R	5452479	intron	CG14669 +	chr3R_6_5445001	chr3R_5445001	SF447_1-HE
1819	chr3R	5809089	5809134	chr3R	5809356	5809401	pogo	8	265	2.5	3.0	2.8	2.1	312	chr3R	5809089	3` UTR	CG11000 +	chr3R	5809245	3` UTR	CG11000 +	chr3R	5809401	3` UTR	CG11000 +	chr3R_8_5805001	chr3R_5805001	SF447_1-HE
1821	chr3R	5927541	5927576	chr3R	5927807	5927842	pogo	6	266	2.5	2.5	2.5	1.7	301	chr3R	5927541	intron	CG34113 -	chr3R	5927692	intron	CG34113 -	chr3R	5927842	intron	CG34113 -	chr3R_6_5925001	chr3R_5925001	SF447_1-HE
1822	chr3R	6015939	6015990	chr3R	6024445	6024497	Tirant	13	8506	1.5	3.0	2.2	4.1	8558	chr3R	6015939	intergenic	not near genes	chr3R	6020218	intergenic	not near genes	chr3R	6024497	intergenic	not near genes	chr3R_13_6020001	chr3R_6020001	SF447_1-HE
1824	chr3R	6158492	6158539	chr3R	6167098	6167148	Tirant	5	8608	3.0	4.0	3.5	1.1	8656	chr3R	6158492	intergenic	not near genes	chr3R	6162820	intergenic	not near genes	chr3R	6167148	intergenic	CG1077 +	chr3R_5_6160001	chr3R_6160001	SF447_1-HE
1825	chr3R	6175161	6175204	chr3R	6182459	6182502	HMS-Beagle2	9	7297	0.5	0.0	0.2	7.5	7341	chr3R	6175161	intergenic	Osi1 +	chr3R	6178832	intron	CR45194 +	chr3R	6182502	intergenic	CR45194 +	chr3R_9_6175001	chr3R_6175001	SF447_1-HE
1827	chr3R	6206273	6206291	chr3R	6206515	6206532	BS	4	242	5.0	4.0	4.5	0.7	259	chr3R	6206273	exon	Osi24 +	chr3R	6206402	intron	Osi24 +	chr3R	6206532	intron	Osi24 +	chr3R_4_6205001	chr3R_6205001	SF447_1-HE
1831	chr3R	6510019	6510048	chr3R	6515126	6515155	jockey	7	5107	2.5	4.5	3.5	1.6	5136	chr3R	6510019	intergenic	not near genes	chr3R	6512587	intergenic	not near genes	chr3R	6515155	intergenic	not near genes	chr3R_7_6510001	chr3R_6510001	SF447_1-HE
1839	chr3R	6737471	6737496	chr3R	6739284	6739309	Doc	10	1812	9.5	2.5	6.0	1.4	1838	chr3R	6737471	intron	pb -	chr3R	6738390	intron	pb -	chr3R	6739309	intron	pb -	chr3R_10_6735001	chr3R_6735001	SF447_1-HE
1859	chr3R	7694580	7694596	chr3R	7713667	7713683	invader3	4	19087	4.5	7.0	5.8	0.6	19103	chr3R	7694580	3` UTR	Nlg1 +	chr3R	7704132	intergenic	not near genes	chr3R	7713683	intergenic	not near genes	chr3R_4_7700001	chr3R_7700001	SF447_1-HE
1861	chr3R	7729442	7729498	chr3R	7737406	7737462	Stalker2	26	7964	2.0	5.5	3.8	5.4	8020	chr3R	7729442	intergenic	not near genes	chr3R	7733452	intergenic	not near genes	chr3R	7737462	intergenic	not near genes	chr3R_26_7730001	chr3R_7730001	SF447_1-HE
1863	chr3R	7849558	7849658	chr3R	7850809	7850851	1360	8	1217	0.0	3.5	1.8	2.9	1293	chr3R	7849558	intron	CG34384 +	chr3R	7850204	intron	CG34384 +	chr3R	7850851	intron	CG34384 +	chr3R_8_7850001	chr3R_7850001	SF447_1-HE
1865	chr3R	7973289	7973340	chr3R	7974377	7974428	1360	7	1087	1.0	1.5	1.2	3.2	1139	chr3R	7973289	intergenic	not near genes	chr3R	7973858	intergenic	not near genes	chr3R	7974428	3` UTR	CD98hc -	chr3R_7_7970001	chr3R_7970001	SF447_1-HE
1868	chr3R	8090542	8090561	chr3R	8094045	8094064	297	8	3503	5.0	10.0	7.5	0.9	3522	chr3R	8090542	intergenic	CR44330 +	chr3R	8092303	intergenic	not near genes	chr3R	8094064	intergenic	CG7900 +	chr3R_8_8090001	chr3R_8090001	SF447_1-HE
1869	chr3R	8094388	8094423	chr3R	8099719	8099753	Transpac	7	5331	3.5	2.5	3.0	1.8	5365	chr3R	8094388	intron	CG7900 +	chr3R	8097070	intron	CG7900 +	chr3R	8099753	intron	CG7900 +	chr3R_7_8095001	chr3R_8095001	SF447_1-HE
1870	chr3R	8101739	8101786	chr3R	8104849	8104895	G2	12	3110	3.5	2.5	3.0	3.0	3156	chr3R	8101739	exon	CG7900 +	chr3R	8103317	intron	CG7900 +	chr3R	8104895	3` UTR	CG7900 +	chr3R_12_8100001	chr3R_8100001	SF447_1-HE
1873	chr3R	8207533	8207573	chr3R	8208402	8208444	F-element	5	870	1.0	1.0	1.0	2.5	911	chr3R	8207533	intergenic	not near genes	chr3R	8207988	intergenic	not near genes	chr3R	8208444	intergenic	not near genes	chr3R_5_8205001	chr3R_8205001	SF447_1-HE
1874	chr3R	8402983	8403039	chr3R	8412175	8412214	roo	34	9190	16.0	9.0	12.5	2.5	9231	chr3R	8402983	intron	CG45263 -	chr3R	8407598	intron	CG45263 -	chr3R	8412214	intron	CG45263 -	chr3R_34_8405001	chr3R_8405001	SF447_1-HE
1876	chr3R	8570459	8570502	chr3R	8575118	8575165	HMS-Beagle	10	4661	1.5	3.0	2.2	3.1	4706	chr3R	8570459	intergenic	not near genes	chr3R	8572812	intergenic	not near genes	chr3R	8575165	intergenic	not near genes	chr3R_10_8570001	chr3R_8570001	SF447_1-HE
1877	chr3R	8601770	8601787	chr3R	8610940	8610963	roo	5	9175	4.0	2.5	3.2	1.2	9193	chr3R	8601770	intron	5-HT2B +	chr3R	8606366	intron	5-HT2B +	chr3R	8610963	intron	5-HT2B +	chr3R_5_8605001	chr3R_8605001	SF447_1-HE
1879	chr3R	8707341	8707381	chr3R	8709803	8709847	jockey	9	2466	7.5	5.0	6.2	1.2	2506	chr3R	8707341	intergenic	not near genes	chr3R	8708594	intergenic	not near genes	chr3R	8709847	intergenic	not near genes	chr3R_9_8705001	chr3R_8705001	SF447_1-HE
1886	chr3R	8894847	8894901	chr3R	8896029	8896083	1360	6	1182	3.0	5.5	4.2	1.2	1236	chr3R	8894847	intron	pyd -	chr3R	8895465	intron	pyd -	chr3R	8896083	intron	pyd -	chr3R_6_8895001	chr3R_8895001	SF447_1-HE
1896	chr3R	9278780	9278797	chr3R	9284062	9284083	Rt1a	7	5285	0.0	5.0	2.5	2.0	5303	chr3R	9278780	intergenic	not near genes	chr3R	9281432	intergenic	not near genes	chr3R	9284083	intergenic	not near genes	chr3R_7_9280001	chr3R_9280001	SF447_1-HE
1898	chr3R	9319557	9319599	chr3R	9320014	9320060	jockey	21	461	6.5	4.5	5.5	3.2	503	chr3R	9319557	intron	CG8861 -	chr3R	9319808	intron	CG8861 -	chr3R	9320060	intron	CG8861 -	chr3R_21_9315001	chr3R_9315001	SF447_1-HE
1900	chr3R	9361805	9361845	chr3R	9362067	9362112	pogo	12	267	2.5	3.0	2.8	3.2	307	chr3R	9361805	3` UTR	CG45050 +	chr3R	9361958	3` UTR	CG45050 +	chr3R	9362112	3` UTR	CG45050 +	chr3R_12_9360001	chr3R_9360001	SF447_1-HE
1907	chr3R	10231764	10231809	chr3R	10237367	10237412	mdg3	8	5603	2.0	5.5	3.8	1.7	5648	chr3R	10231764	intron	CG42795 +	chr3R	10234588	intron	CG42795 +	chr3R	10237412	intron	CG42795 +	chr3R_8_10230001	chr3R_10230001	SF447_1-HE
1908	chr3R	10255355	10255375	chr3R	10260821	10260841	I-element	4	5466	4.5	2.0	3.2	1.0	5486	chr3R	10255355	3` UTR	Sirt6 -	chr3R	10258098	intron	Sirt6 -	chr3R	10260841	exon	Sirt6 -	chr3R_4_10255001	chr3R_10255001	SF447_1-HE
1915	chr3R	10804148	10804199	chr3R	10811706	10811757	17.6	7	7558	1.5	2.0	1.8	2.5	7609	chr3R	10804148	intergenic	CG14692 -	chr3R	10807952	intergenic	not near genes	chr3R	10811757	3` UTR	CG14693 -	chr3R_7_10805001	chr3R_10805001	SF447_1-HE
1938	chr3R	11379211	11379252	chr3R	11388392	11388433	roo	22	9181	13.5	8.0	10.8	1.9	9222	chr3R	11379211	intron	pros +	chr3R	11383822	intron	pros +	chr3R	11388433	intron	pros +	chr3R_22_11380001	chr3R_11380001	SF447_1-HE
1944	chr3R	11841039	11841084	chr3R	11846256	11846301	BS	11	5213	8.0	7.0	7.5	1.3	5262	chr3R	11841039	intron	CG6959 -	chr3R	11843670	intron	CG6959 -	chr3R	11846301	intron	CG6959 -	chr3R_11_11840001	chr3R_11840001	SF447_1-HE
1946	chr3R	12022867	12022912	chr3R	12025070	12025115	pogo	7	2202	1.5	4.5	3.0	1.8	2248	chr3R	12022867	intergenic	not near genes	chr3R	12023991	intergenic	not near genes	chr3R	12025115	intergenic	not near genes	chr3R_7_12020001	chr3R_12020001	SF447_1-HE
1967	chr3R	12780281	12780291	chr3R	12780419	12780429	BS	4	137	2.5	0.0	1.2	1.8	148	chr3R	12780281	intron	beat-Vc -	chr3R	12780355	intron	beat-Vc -	chr3R	12780429	intron	beat-Vc -	chr3R_4_12780001	chr3R_12780001	SF447_1-HE
1972	chr3R	12920137	12920176	chr3R	12925366	12925405	copia	7	5229	6.0	5.0	5.5	1.1	5268	chr3R	12920137	intron	beat-Vb +	chr3R	12922771	intron	beat-Vb +	chr3R	12925405	intron	beat-Vb +	chr3R_7_12920001	chr3R_12920001	SF447_1-HE
1980	chr3R	13135813	13135838	chr3R	13138004	13138029	pogo	7	2191	3.5	0.5	2.0	2.3	2216	chr3R	13135813	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13136921	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13138029	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R_7_13135001	chr3R_13135001	SF447_1-HE
1982	chr3R	13143014	13143056	chr3R	13148616	13148648	mdg3	13	5599	3.0	2.0	2.5	3.7	5634	chr3R	13143014	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13145831	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13148648	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R_13_13145001	chr3R_13145001	SF447_1-HE
1988	chr3R	13517204	13517256	chr3R	13520047	13520081	jockey	11	2840	3.5	0.0	1.8	3.9	2877	chr3R	13517204	intergenic	not near genes	chr3R	13518642	intergenic	not near genes	chr3R	13520081	intergenic	not near genes	chr3R_11_13515001	chr3R_13515001	SF447_1-HE
1997	chr3R	14021614	14021662	chr3R	14023465	14023513	S-element	11	1851	3.5	5.0	4.2	2.1	1899	chr3R	14021614	intron	rdx -	chr3R	14022564	intron	rdx -	chr3R	14023513	intron	rdx -	chr3R_11_14020001	chr3R_14020001	SF447_1-HE
2003	chr3R	14180784	14180824	chr3R	14185575	14185602	F-element	5	4788	8.5	1.0	4.8	0.9	4818	chr3R	14180784	intron	Dop1R1 -	chr3R	14183193	intron	Dop1R1 -	chr3R	14185602	intron	Dop1R1 -	chr3R_5_14180001	chr3R_14180001	SF447_1-HE
2004	chr3R	14246376	14246418	chr3R	14247897	14247940	jockey	6	1522	0.5	3.0	1.8	2.1	1564	chr3R	14246376	intergenic	not near genes	chr3R	14247158	intergenic	not near genes	chr3R	14247940	intergenic	not near genes	chr3R_6_14245001	chr3R_14245001	SF447_1-HE
2023	chr3R	15041410	15041451	chr3R	15045203	15045245	Doc	9	3793	1.5	4.0	2.8	2.4	3835	chr3R	15041410	intergenic	not near genes	chr3R	15043328	intergenic	not near genes	chr3R	15045245	intergenic	not near genes	chr3R_9_15040001	chr3R_15040001	SF447_1-HE
2024	chr3R	15079780	15079836	chr3R	15080047	15080103	pogo	12	267	4.5	2.0	3.2	2.9	323	chr3R	15079780	3` UTR	CG6966 -	chr3R	15079942	3` UTR	CG6966 -	chr3R	15080103	3` UTR	CG6966 -	chr3R_12_15075001	chr3R_15075001	SF447_1-HE
2025	chr3R	15102474	15102521	chr3R	15109755	15109802	412	6	7281	1.5	5.5	3.5	1.3	7328	chr3R	15102474	intron	CG42788 -	chr3R	15106138	intron	CG42788 -	chr3R	15109802	intron	CG42788 -	chr3R_6_15105001	chr3R_15105001	SF447_1-HE
2027	chr3R	15132039	15132073	chr3R	15135125	15135159	Juan	15	3086	7.5	10.0	8.8	1.5	3120	chr3R	15132039	intergenic	CG42788 -	chr3R	15133599	intergenic	not near genes	chr3R	15135159	3` UTR	CG6912 -	chr3R_15_15130001	chr3R_15130001	SF447_1-HE
2030	chr3R	15162522	15162545	chr3R	15167316	15167339	F-element	6	4794	5.5	2.0	3.8	1.2	4817	chr3R	15162522	intron	Gyc88E +	chr3R	15164930	intron	Gyc88E +	chr3R	15167339	intron	Gyc88E +	chr3R_6_15160001	chr3R_15160001	SF447_1-HE
2034	chr3R	15601148	15601192	chr3R	15608694	15608740	412	12	7547	8.0	4.5	6.2	1.7	7592	chr3R	15601148	intergenic	not near genes	chr3R	15604944	intergenic	not near genes	chr3R	15608740	intergenic	not near genes	chr3R_12_15600001	chr3R_15600001	SF447_1-HE
2035	chr3R	15618713	15618736	chr3R	15626213	15626236	blood	6	7500	7.5	2.5	5.0	1.0	7523	chr3R	15618713	intergenic	not near genes	chr3R	15622474	intergenic	not near genes	chr3R	15626236	intergenic	not near genes	chr3R_6_15620001	chr3R_15620001	SF447_1-HE
2036	chr3R	15618746	15618761	chr3R	15626208	15626261	blood	5	7492	4.0	2.0	3.0	1.2	7515	chr3R	15618746	intergenic	not near genes	chr3R	15622504	intergenic	not near genes	chr3R	15626261	intergenic	not near genes	chr3R_5_15620001	chr3R_15620001	SF447_1-HE
2050	chr3R	16189393	16189434	chr3R	16189822	16189863	invader4	5	429	2.5	2.0	2.2	1.6	470	chr3R	16189393	intron	sra +	chr3R	16189628	intron	sra +	chr3R	16189863	intron	sra +	chr3R_5_16185001	chr3R_16185001	SF447_1-HE
2062	chr3R	16756296	16756345	chr3R	16762509	16762561	diver	13	6213	4.0	3.5	3.8	2.7	6265	chr3R	16756296	intron	bxd -	chr3R	16759428	intron	bxd -	chr3R	16762561	intron	bxd -	chr3R_13_16755001	chr3R_16755001	SF447_1-HE
2077	chr3R	17294661	17294695	chr3R	17295114	17295149	BS	5	453	2.5	3.0	2.8	1.3	488	chr3R	17294661	intergenic	not near genes	chr3R	17294905	intergenic	not near genes	chr3R	17295149	intergenic	not near genes	chr3R_5_17290001	chr3R_17290001	SF447_1-HE
2080	chr3R	17346674	17346709	chr3R	17348263	17348298	F-element	10	1589	3.0	4.0	3.5	2.2	1624	chr3R	17346674	intron	beat-IIa -	chr3R	17347486	intron	beat-IIa -	chr3R	17348298	intron	beat-IIa -	chr3R_10_17345001	chr3R_17345001	SF447_1-HE
2097	chr3R	17925832	17925871	chr3R	17927325	17927364	hobo	21	1492	19.0	14.5	16.8	1.2	1532	chr3R	17925832	intron	cpo +	chr3R	17926598	intron	cpo +	chr3R	17927364	intron	cpo +	chr3R_21_17925001	chr3R_17925001	SF447_1-HE
2135	chr3R	19193002	19193012	chr3R	19197279	19197342	F-element	8	4302	2.0	1.5	1.8	2.9	4340	chr3R	19193002	intron	CG31475 +	chr3R	19195172	intron	CG31475 +	chr3R	19197342	intron	CG31475 +	chr3R_8_19195001	chr3R_19195001	SF447_1-HE
2166	chr3R	20156671	20156717	chr3R	20165867	20165913	roo	9	9196	2.0	5.0	3.5	2.0	9242	chr3R	20156671	intergenic	not near genes	chr3R	20161292	intergenic	not near genes	chr3R	20165913	intergenic	not near genes	chr3R_9_20160001	chr3R_20160001	SF447_1-HE
2168	chr3R	20245283	20245304	chr3R	20248919	20248940	F-element	7	3636	2.0	0.5	1.2	3.2	3657	chr3R	20245283	3` UTR	Nlg4 +	chr3R	20247112	intergenic	not near genes	chr3R	20248940	intergenic	not near genes	chr3R_7_20245001	chr3R_20245001	SF447_1-HE
2170	chr3R	20266493	20266526	chr3R	20272990	20273023	Burdock	9	6497	8.0	4.0	6.0	1.3	6530	chr3R	20266493	intron	cic +	chr3R	20269758	intron	cic +	chr3R	20273023	intron	cic +	chr3R_9_20265001	chr3R_20265001	SF447_1-HE
2172	chr3R	20330995	20331025	chr3R	20331506	20331536	roo	4	512	1.5	3.0	2.2	1.2	541	chr3R	20330995	intergenic	Sirt2 +	chr3R	20331266	intergenic	Sirt2 +	chr3R	20331536	intergenic	not near genes	chr3R_4_20330001	chr3R_20330001	SF447_1-HE
2177	chr3R	20506577	20506594	chr3R	20507406	20507423	BS	6	828	2.0	3.5	2.8	1.6	846	chr3R	20506577	intergenic	Or92a +	chr3R	20507000	intergenic	CG4288 -	chr3R	20507423	3` UTR	CG4288 -	chr3R_6_20505001	chr3R_20505001	SF447_1-HE
2190	chr3R	20854473	20854507	chr3R	20859289	20859306	Doc	5	4813	3.0	2.5	2.8	1.3	4833	chr3R	20854473	intron	Ir93a -	chr3R	20856890	intron	Ir93a -	chr3R	20859306	exon	Ir93a -	chr3R_5_20855001	chr3R_20855001	SF447_1-HE
2200	chr3R	21141653	21141704	chr3R	21150160	21150210	Tirant	5	8507	2.0	4.0	3.0	1.2	8557	chr3R	21141653	intron	SNF4Agamma +	chr3R	21145932	intron	SNF4Agamma +	chr3R	21150210	intron	SNF4Agamma +	chr3R_5_21145001	chr3R_21145001	SF447_1-HE
2220	chr3R	21608983	21609030	chr3R	21611643	21611690	NOF	14	2660	7.0	6.5	6.8	1.8	2707	chr3R	21608983	intron	InR -	chr3R	21610336	intron	InR -	chr3R	21611690	intron	InR -	chr3R_14_21610001	chr3R_21610001	SF447_1-HE
2225	chr3R	21761102	21761149	chr3R	21768520	21768567	mdg1	7	7417	0.5	3.0	1.8	2.5	7465	chr3R	21761102	exon	CG42335 +	chr3R	21764834	intron	CG42335 +	chr3R	21768567	exon	CG42335 +	chr3R_7_21760001	chr3R_21760001	SF447_1-HE
2245	chr3R	22234659	22234715	chr3R	22236004	22236060	pogo	18	1344	3.5	4.5	4.0	3.6	1401	chr3R	22234659	intron	SKIP +	chr3R	22235360	intron	SKIP +	chr3R	22236060	intron	SKIP +	chr3R_18_22235001	chr3R_22235001	SF447_1-HE
2247	chr3R	22239472	22239523	chr3R	22248558	22248597	roo	5	9079	3.5	0.5	2.0	1.7	9125	chr3R	22239472	intron	SKIP +	chr3R	22244034	intron	SKIP +	chr3R	22248597	intron	SKIP +	chr3R_5_22240001	chr3R_22240001	SF447_1-HE
2253	chr3R	22450540	22450561	chr3R	22453193	22453227	NOF	5	2663	2.5	2.5	2.5	1.4	2687	chr3R	22450540	intron	CG34376 +	chr3R	22451884	intron	CG34376 +	chr3R	22453227	intron	CG34376 +	chr3R_5_22450001	chr3R_22450001	SF447_1-HE
2294	chr3R	23558372	23558415	chr3R	23560179	23560222	Bari1	11	1807	4.5	2.5	3.5	2.4	1850	chr3R	23558372	intron	beat-IV +	chr3R	23559297	intron	beat-IV +	chr3R	23560222	intron	beat-IV +	chr3R_11_23555001	chr3R_23555001	SF447_1-HE
2298	chr3R	23684674	23684719	chr3R	23685186	23685230	roo	11	512	4.5	7.0	5.8	1.6	556	chr3R	23684674	exon	CG18754 +	chr3R	23684952	intron	CG18754 +	chr3R	23685230	exon	CG18754 +	chr3R_11_23680001	chr3R_23680001	SF447_1-HE
2306	chr3R	24072063	24072109	chr3R	24072526	24072572	jockey	18	464	7.5	9.5	8.5	1.9	509	chr3R	24072063	intron	4EHP -	chr3R	24072318	intron	4EHP -	chr3R	24072572	intron	4EHP -	chr3R_18_24070001	chr3R_24070001	SF447_1-HE
2308	chr3R	24076893	24076943	chr3R	24078385	24078436	hobo	12	1493	12.0	2.5	7.2	1.5	1543	chr3R	24076893	intron	4EHP -	chr3R	24077664	intron	4EHP -	chr3R	24078436	intron	4EHP -	chr3R_12_24075001	chr3R_24075001	SF447_1-HE
2314	chr3R	24493255	24493272	chr3R	24493510	24493526	BS	6	255	11.0	0.0	5.5	0.9	271	chr3R	24493255	intergenic	not near genes	chr3R	24493390	intergenic	not near genes	chr3R	24493526	intergenic	not near genes	chr3R_6_24490001	chr3R_24490001	SF447_1-HE
2322	chr3R	24927106	24927147	chr3R	24931923	24931964	Doc	9	4817	3.0	3.0	3.0	2.2	4858	chr3R	24927106	intergenic	Trf4-2 +	chr3R	24929535	intergenic	not near genes	chr3R	24931964	intergenic	CG11771 +	chr3R_9_24925001	chr3R_24925001	SF447_1-HE
2339	chr3R	25725804	25725834	chr3R	25734990	25735020	roo	5	9186	3.0	0.0	1.5	2.0	9216	chr3R	25725804	intron	LpR2 -	chr3R	25730412	intron	LpR2 -	chr3R	25735020	intron	LpR2 -	chr3R_5_25730001	chr3R_25730001	SF447_1-HE
2341	chr3R	25832674	25832715	chr3R	25841882	25841915	roo	10	9207	5.5	7.5	6.5	1.3	9241	chr3R	25832674	exon	alpha4GT2 +	chr3R	25837294	intron	alpha4GT2 +	chr3R	25841915	exon	alpha4GT2 +	chr3R_10_25835001	chr3R_25835001	SF447_1-HE
2353	chr3R	26376303	26376342	chr3R	26385489	26385514	roo	4	9182	5.5	0.0	2.8	1.1	9211	chr3R	26376303	intergenic	not near genes	chr3R	26380908	intergenic	not near genes	chr3R	26385514	intergenic	not near genes	chr3R_4_26380001	chr3R_26380001	SF447_1-HE
2357	chr3R	26510498	26510534	chr3R	26519579	26519609	roo	19	9080	4.5	7.0	5.8	2.8	9111	chr3R	26510498	intron	plum -	chr3R	26515054	intron	plum -	chr3R	26519609	intron,5` UTR	plum -,CR45226 +	chr3R_19_26515001	chr3R_26515001	SF447_1-HE
2360	chr3R	26558318	26558356	chr3R	26565656	26565694	Stalker4	7	7335	7.0	3.5	5.2	1.1	7376	chr3R	26558318	intron	scrib +	chr3R	26562006	intron	scrib +	chr3R	26565694	intron	scrib +	chr3R_7_26560001	chr3R_26560001	SF447_1-HE
2363	chr3R	26642716	26642755	chr3R	26643135	26643174	jockey	4	419	2.5	0.5	1.5	1.6	458	chr3R	26642716	intergenic	not near genes	chr3R	26642945	intergenic	not near genes	chr3R	26643174	intergenic	not near genes	chr3R_4_26640001	chr3R_26640001	SF447_1-HE
2368	chr3R	26810529	26810581	chr3R	26811040	26811092	roo	14	511	5.5	3.0	4.2	2.7	563	chr3R	26810529	intron	Tl +	chr3R	26810810	intron	Tl +	chr3R	26811092	intron	Tl +	chr3R_14_26810001	chr3R_26810001	SF447_1-HE
2374	chr3R	27007391	27007430	chr3R	27016544	27016591	roo	12	9160	3.5	5.0	4.2	2.3	9200	chr3R	27007391	intron	RYa-R +	chr3R	27011991	intron	RYa-R +	chr3R	27016591	intron	RYa-R +	chr3R_12_27010001	chr3R_27010001	SF447_1-HE
2380	chr3R	27140489	27140541	chr3R	27148125	27148177	412	16	7634	7.5	4.5	6.0	2.3	7688	chr3R	27140489	intron	CG6051 -	chr3R	27144333	intron	CG6051 -	chr3R	27148177	intron	CG6051 -	chr3R_16_27140001	chr3R_27140001	SF447_1-HE
2383	chr3R	27342768	27342816	chr3R	27351375	27351423	Tirant	7	8607	2.0	2.5	2.2	2.2	8655	chr3R	27342768	intron	CG42534 +	chr3R	27347096	intron	CG42534 +	chr3R	27351423	intron	CG42534 +	chr3R_7_27345001	chr3R_27345001	SF447_1-HE
2389	chr3R	27725574	27725586	chr3R	27731042	27731054	I-element	4	5468	2.0	7.0	4.5	0.7	5480	chr3R	27725574	intergenic	not near genes	chr3R	27728314	intergenic	not near genes	chr3R	27731054	intergenic	not near genes	chr3R_4_27725001	chr3R_27725001	SF447_1-HE
2395	chr3R	27856738	27856788	chr3R	27858247	27858290	hopper2	21	1509	11.5	10.5	11.0	1.8	1552	chr3R	27856738	intron	CG34353 -	chr3R	27857514	intron	CG34353 -	chr3R	27858290	intron	CG34353 -	chr3R_21_27855001	chr3R_27855001	SF447_1-HE
2396	chr3R	27862928	27862957	chr3R	27868260	27868289	Transpac	4	5332	0.0	2.0	1.0	2.0	5361	chr3R	27862928	intron	CG34353 -	chr3R	27865608	intron	CG34353 -	chr3R	27868289	intron	CG34353 -	chr3R_4_27865001	chr3R_27865001	SF447_1-HE
2397	chr3R	27875683	27875724	chr3R	27882762	27882805	297	14	7080	5.0	4.0	4.5	2.5	7122	chr3R	27875683	intron	CG34353 -	chr3R	27879244	intron	CG34353 -	chr3R	27882805	intron	CG34353 -	chr3R_14_27875001	chr3R_27875001	SF447_1-HE
2403	chr3R	28068479	28068524	chr3R	28073939	28073992	I-element	12	5467	0.0	6.5	3.2	2.9	5513	chr3R	28068479	intron	CG34362 +	chr3R	28071236	intron	CG34362 +	chr3R	28073992	intron	CG34362 +	chr3R_12_28070001	chr3R_28070001	SF447_1-HE
2407	chr3R	28173677	28173684	chr3R	28181133	28181140	mdg1	4	7456	4.5	5.5	5.0	0.7	7463	chr3R	28173677	intron	CG34354 +	chr3R	28177408	intron	CG34354 +	chr3R	28181140	intron	CG34354 +	chr3R_4_28175001	chr3R_28175001	SF447_1-HE
2408	chr3R	28253318	28253358	chr3R	28255854	28255854	jockey	9	2532	4.0	7.5	5.8	1.3	2536	chr3R	28253318	intergenic	not near genes	chr3R	28254586	intergenic	not near genes	chr3R	28255854	intergenic	not near genes	chr3R_9_28250001	chr3R_28250001	SF447_1-HE
2424	chr3R	28792846	28792902	chr3R	28797967	28798023	jockey	12	5116	6.0	5.0	5.5	1.8	5177	chr3R	28792846	intergenic	not near genes	chr3R	28795434	intergenic	not near genes	chr3R	28798023	intergenic	not near genes	chr3R_12_28795001	chr3R_28795001	SF447_1-HE
2431	chr3R	29079354	29079394	chr3R	29080752	29080792	NOF	18	1397	7.5	3.0	5.2	2.9	1438	chr3R	29079354	intron	CG11873 +	chr3R	29080073	intron	CG11873 +	chr3R	29080792	intron	CG11873 +	chr3R_18_29080001	chr3R_29080001	SF447_1-HE
2437	chr3R	29319809	29319850	chr3R	29320154	29320195	jockey	6	345	3.5	3.0	3.2	1.4	386	chr3R	29319809	intergenic	Cnx99A -	chr3R	29320002	intergenic	Cnx99A -	chr3R	29320195	intergenic	not near genes	chr3R_6_29320001	chr3R_29320001	SF447_1-HE
2442	chr3R	29406609	29406646	chr3R	29407921	29407948	jockey	11	1311	5.5	6.0	5.8	1.6	1339	chr3R	29406609	intron	Ptp99A +	chr3R	29407278	intron	Ptp99A +	chr3R	29407948	intron	Ptp99A +	chr3R_11_29405001	chr3R_29405001	SF447_1-HE
2457	chr3R	29882005	29882049	chr3R	29891188	29891231	roo	4	9183	1.5	2.0	1.8	1.4	9226	chr3R	29882005	intron	CG31038 +	chr3R	29886618	intron	CG31038 +	chr3R	29891231	intron	CG31038 +	chr3R_4_29885001	chr3R_29885001	SF447_1-HE
2460	chr3R	30084840	30084875	chr3R	30086333	30086368	hobo	6	1493	1.5	1.5	1.5	2.4	1528	chr3R	30084840	intron	sima +	chr3R	30085604	intron	sima +	chr3R	30086368	intron	sima +	chr3R_6_30085001	chr3R_30085001	SF447_1-HE
2464	chr3R	30238740	30238781	chr3R	30239930	30239972	1360	5	1190	4.0	0.0	2.0	1.7	1232	chr3R	30238740	intergenic	not near genes	chr3R	30239356	intergenic	not near genes	chr3R	30239972	intergenic	not near genes	chr3R_5_30235001	chr3R_30235001	SF447_1-HE
2486	chr3R	30679496	30679552	chr3R	30686991	30687047	blood	8	7495	0.5	4.0	2.2	2.5	7551	chr3R	30679496	intergenic	not near genes	chr3R	30683272	intergenic	not near genes	chr3R	30687047	intergenic	not near genes	chr3R_8_30680001	chr3R_30680001	SF447_1-HE
2490	chr3R	30818793	30818808	chr3R	30820384	30820399	1360	4	1591	0.5	2.0	1.2	1.8	1606	chr3R	30818793	intron	cindr +	chr3R	30819596	intron	cindr +	chr3R	30820399	intron	cindr +	chr3R_4_30815001	chr3R_30815001	SF447_1-HE
2503	chr3R	31279363	31279395	chr3R	31285580	31285595	diver	4	6213	2.5	0.0	1.2	1.8	6232	chr3R	31279363	intergenic	not near genes	chr3R	31282479	intergenic	not near genes	chr3R	31285595	intergenic	not near genes	chr3R_4_31280001	chr3R_31280001	SF447_1-HE
2506	chr3R	31413076	31413109	chr3R	31418302	31418335	copia	4	5226	3.5	0.0	1.8	1.4	5259	chr3R	31413076	intron	Gprk2 +	chr3R	31415706	intron	Gprk2 +	chr3R	31418335	intron	Gprk2 +	chr3R_4_31415001	chr3R_31415001	SF447_1-HE
2513	chr3R	31691507	31691561	chr3R	31696299	31696353	Doc	13	4789	2.5	2.5	2.5	3.7	4846	chr3R	31691507	intergenic	not near genes	chr3R	31693930	intergenic	not near genes	chr3R	31696353	intergenic	not near genes	chr3R_13_31690001	chr3R_31690001	SF447_1-HE
2518	chr3R	31997975	31997998	chr3R	32005471	32005494	blood	7	7495	4.0	5.0	4.5	1.3	7519	chr3R	31997975	intron	heph -	chr3R	32001734	intron	heph -	chr3R	32005494	intron	heph -	chr3R_7_32000001	chr3R_32000001	SF447_1-HE
2520	chr4	76484	76515	chr4	81953	81984	I-element	4	5469	4.5	2.0	3.2	1.0	5500	chr4	76484	intron	pan +	chr4	79234	intron	pan +	chr4	81984	intron	pan +	chr4_4_75001	chr4_75001	SF447_1-HE
2524	chr4	671589	671620	chr4	680198	680229	Tirant	11	8609	9.0	3.5	6.2	1.5	8640	chr4	671589	intron	CG11360 +	chr4	675909	intron	CG11360 +	chr4	680229	intron	CG11360 +	chr4_11_675001	chr4_675001	SF447_1-HE
2529	chrX	295839	295882	chrX	303485	303523	412	12	7645	1.0	7.0	4.0	2.4	7684	chrX	295839	intron	CG3777 +	chrX	299681	intron	CG3777 +	chrX	303523	intron	CG3777 +	chrX_12_295001	chrX_295001	SF447_1-HE
2531	chrX	318452	318497	chrX	323561	323609	flea	16	5112	2.5	7.5	5.0	2.7	5157	chrX	318452	intron,intron	CG3777 +,CG32816 -	chrX	321030	intron,intron	CG3777 +,CG32816 -	chrX	323609	intron,intron	CG3777 +,CG32816 -	chrX_16_320001	chrX_320001	SF447_1-HE
2534	chrX	428402	428452	chrX	434628	434678	3S18	19	6226	0.5	2.0	1.2	8.6	6276	chrX	428402	intron	CG32816 -	chrX	431540	intron	CG32816 -	chrX	434678	intron	CG32816 -	chrX_19_430001	chrX_430001	SF447_1-HE
2537	chrX	551403	551425	chrX	558991	559013	412	14	7588	16.5	8.0	12.2	1.1	7610	chrX	551403	intron	Appl +	chrX	555208	intron	Appl +	chrX	559013	intron	Appl +	chrX_14_555001	chrX_555001	SF447_1-HE
2542	chrX	812245	812283	chrX	817904	817942	297	7	5659	4.0	2.0	3.0	1.8	5697	chrX	812245	intron	CG43867 -	chrX	815094	intron	CG43867 -	chrX	817942	intron	CG43867 -	chrX_7_815001	chrX_815001	SF447_1-HE
2543	chrX	827581	827631	chrX	835398	835449	roo	19	7818	5.0	6.0	5.5	2.9	7868	chrX	827581	intron	CG43867 -	chrX	831515	intron	CG43867 -	chrX	835449	intron	CG43867 -	chrX_19_830001	chrX_830001	SF447_1-HE
2546	chrX	906677	906731	chrX	908492	908546	S-element	13	1815	3.5	6.0	4.8	2.2	1869	chrX	906677	intron	CG43867 -	chrX	907612	intron	CG43867 -	chrX	908546	intron	CG43867 -	chrX_13_905001	chrX_905001	SF447_1-HE
2553	chrX	1357755	1357806	chrX	1367951	1367997	Doc	12	10194	4.5	2.5	3.5	2.7	10242	chrX	1357755	intergenic	png -	chrX	1362876	intergenic	not near genes	chrX	1367997	intergenic	not near genes	chrX_12_1360001	chrX_1360001	SF447_1-HE
2555	chrX	1518024	1518063	chrX	1523452	1523491	jockey	8	5428	2.5	3.5	3.0	2.0	5467	chrX	1518024	intergenic	inc +	chrX	1520758	intergenic	not near genes	chrX	1523491	intergenic	not near genes	chrX_8_1520001	chrX_1520001	SF447_1-HE
2557	chrX	1627964	1627978	chrX	1635458	1635468	gtwin	20	7494	11.5	32.5	22.0	0.9	7504	chrX	1627964	intron,intron	Mur2B -,br +	chrX	1631716	intron,intron	Mur2B -,br +	chrX	1635468	intron,intron	Mur2B -,br +	chrX_20_1630001	chrX_1630001	SF447_1-HE
2558	chrX	1627980	1627992	chrX	1635446	1635467	gtwin	6	7475	11.5	27.5	19.5	0.3	7487	chrX	1627980	intron,intron	Mur2B -,br +	chrX	1631724	intron,intron	Mur2B -,br +	chrX	1635467	intron,intron	Mur2B -,br +	chrX_6_1630001	chrX_1630001	SF447_1-HE
2562	chrX	1930511	1930565	chrX	1938108	1938161	opus	4	7597	1.5	1.5	1.5	1.6	7650	chrX	1930511	3` UTR	CG11596 +	chrX	1934336	intergenic	not near genes	chrX	1938161	3` UTR	CG3857 -	chrX_4_1930001	chrX_1930001	SF447_1-HE
2563	chrX	1954858	1954916	chrX	1962824	1962882	Stalker2	13	7965	3.0	2.5	2.8	3.4	8024	chrX	1954858	intron	Hr4 +	chrX	1958870	intron	Hr4 +	chrX	1962882	intron	Hr4 +	chrX_13_1955001	chrX_1955001	SF447_1-HE
2567	chrX	2399812	2399869	chrX	2408191	2408236	roo	13	8376	3.5	0.0	1.8	4.6	8424	chrX	2399812	intergenic	not near genes	chrX	2404024	intergenic	not near genes	chrX	2408236	intergenic	not near genes	chrX_13_2400001	chrX_2400001	SF447_1-HE
2572	chrX	2664346	2664405	chrX	2665528	2665593	1360	30	1182	5.0	5.5	5.2	4.8	1247	chrX	2664346	intron	sgg +	chrX	2664970	intron	sgg +	chrX	2665593	intron	sgg +	chrX_30_2660001	chrX_2660001	SF447_1-HE
2575	chrX	2823768	2823779	chrX	2832342	2832348	roo	6	8573	14.5	0.5	7.5	0.7	8580	chrX	2823768	intron	kirre +	chrX	2828058	intron	kirre +	chrX	2832348	intron	kirre +	chrX_6_2825001	chrX_2825001	SF447_1-HE
2577	chrX	2844880	2844931	chrX	2852316	2852367	mdg1	22	7436	8.0	10.0	9.0	2.2	7487	chrX	2844880	intron	kirre +	chrX	2848624	intron	kirre +	chrX	2852367	intron	kirre +	chrX_22_2845001	chrX_2845001	SF447_1-HE
2589	chrX	3415021	3415040	chrX	3421214	3421251	3S18	4	6206	0.5	0.5	0.5	2.7	6230	chrX	3415021	intron,intron	CR44999 +,CG12535 -	chrX	3418136	intron,intron	CR44999 +,CG12535 -	chrX	3421251	intron,intron	CR44999 +,CG12535 -	chrX_4_3415001	chrX_3415001	SF447_1-HE
2591	chrX	3493095	3493117	chrX	3502271	3502303	roo	5	9184	1.5	2.0	1.8	1.8	9208	chrX	3493095	intron,intron	CR44999 +,Gas8 -	chrX	3497699	intron,intron	CR44999 +,Gas8 -	chrX	3502303	intron,intron	CR44999 +,Gas8 -	chrX_5_3495001	chrX_3495001	SF447_1-HE
2595	chrX	3597529	3597558	chrX	3619723	3619745	roo	9	22193	7.0	2.5	4.8	1.6	22216	chrX	3597529	intron	AstA-R1 +	chrX	3608637	intron	AstA-R1 +	chrX	3619745	intron	AstA-R1 +	chrX_9_3605001	chrX_3605001	SF447_1-HE
2602	chrX	3726751	3726776	chrX	3730174	3730199	NOF	13	3422	9.0	0.0	4.5	2.4	3448	chrX	3726751	intron	tlk +	chrX	3728475	intron	tlk +	chrX	3730199	intron	tlk +	chrX_13_3725001	chrX_3725001	SF447_1-HE
2604	chrX	3842319	3842349	chrX	3842586	3842616	pogo	4	267	3.0	9.5	6.2	0.6	297	chrX	3842319	intron	ec +	chrX	3842468	intron	ec +	chrX	3842616	intron	ec +	chrX_4_3840001	chrX_3840001	SF447_1-HE
2610	chrX	4157867	4157916	chrX	4164928	4164977	297	19	7060	10.0	4.5	7.2	2.3	7110	chrX	4157867	intron	Fas2 -	chrX	4161422	intron	Fas2 -	chrX	4164977	intron	Fas2 -	chrX_19_4160001	chrX_4160001	SF447_1-HE
2627	chrX	4636702	4636720	chrX	4636801	4636823	roo	5	102	2.0	3.5	2.8	1.3	121	chrX	4636702	exon	pon +	chrX	4636762	exon	pon +	chrX	4636823	exon	pon +	chrX_5_4635001	chrX_4635001	SF447_1-HE
2630	chrX	4700367	4700420	chrX	4700736	4700789	jockey	13	369	7.5	3.5	5.5	2.0	422	chrX	4700367	3` UTR	ctp +	chrX	4700578	3` UTR	ctp +	chrX	4700789	3` UTR	ctp +	chrX_13_4700001	chrX_4700001	SF447_1-HE
2631	chrX	4763234	4763280	chrX	4763748	4763794	Stalker4	7	514	5.5	5.5	5.5	1.1	560	chrX	4763234	intergenic	not near genes	chrX	4763514	intergenic	not near genes	chrX	4763794	intergenic	not near genes	chrX_7_4760001	chrX_4760001	SF447_1-HE
2632	chrX	4792356	4792399	chrX	4792815	4792858	jockey	12	458	1.5	4.0	2.8	3.2	502	chrX	4792356	intergenic	not near genes	chrX	4792607	intergenic	not near genes	chrX	4792858	intergenic	not near genes	chrX_12_4790001	chrX_4790001	SF447_1-HE
2633	chrX	4827947	4827974	chrX	4835344	4835371	Stalker4	15	7397	7.5	8.0	7.8	1.7	7424	chrX	4827947	intergenic	not near genes	chrX	4831659	intergenic	not near genes	chrX	4835371	intergenic	not near genes	chrX_15_4830001	chrX_4830001	SF447_1-HE
2634	chrX	4827976	4827999	chrX	4835343	4835396	Stalker4	11	7390	6.5	7.5	7.0	1.4	7420	chrX	4827976	intergenic	not near genes	chrX	4831686	intergenic	not near genes	chrX	4835396	intergenic	not near genes	chrX_11_4830001	chrX_4830001	SF447_1-HE
2635	chrX	5096286	5096302	chrX	5103877	5103893	springer	4	7590	0.0	10.0	5.0	0.7	7607	chrX	5096286	intron,intron	CG15465 +,rg +	chrX	5100090	intron,intron	CG15465 +,rg +	chrX	5103893	intron,intron	CG15465 +,rg +	chrX_4_5100001	chrX_5100001	SF447_1-HE
2641	chrX	5338682	5338722	chrX	5339961	5339993	jockey	12	1278	6.5	5.0	5.8	1.8	1311	chrX	5338682	intergenic	not near genes	chrX	5339338	intergenic	not near genes	chrX	5339993	intergenic	SK +	chrX_12_5335001	chrX_5335001	SF447_1-HE
2650	chrX	5727399	5727414	chrX	5732164	5732179	Doc	4	4765	4.5	2.0	3.2	1.0	4780	chrX	5727399	intron	CG32758 -	chrX	5729789	intron	CG32758 -	chrX	5732179	intron	CG32758 -	chrX_4_5725001	chrX_5725001	SF447_1-HE
2654	chrX	5883790	5883834	chrX	5884057	5884102	pogo	5	268	1.5	2.0	1.8	1.8	312	chrX	5883790	intron	CR45668 -	chrX	5883946	intron	CR45668 -	chrX	5884102	intron	CR45668 -	chrX_5_5880001	chrX_5880001	SF447_1-HE
2656	chrX	6171571	6171603	chrX	6179021	6179062	Quasimodo	10	7454	9.5	7.0	8.2	1.1	7491	chrX	6171571	intron	Ca-alpha1T -	chrX	6175316	intron	Ca-alpha1T -	chrX	6179062	intron	Ca-alpha1T -	chrX_10_6175001	chrX_6175001	SF447_1-HE
2658	chrX	6335182	6335238	chrX	6337720	6337774	Tirant	6	2537	3.0	1.0	2.0	2.0	2592	chrX	6335182	intergenic	not near genes	chrX	6336478	intergenic	not near genes	chrX	6337774	5` UTR	CG3842 +	chrX_6_6335001	chrX_6335001	SF447_1-HE
2660	chrX	6392848	6392902	chrX	6397639	6397693	Doc	10	4791	4.5	5.0	4.8	1.7	4845	chrX	6392848	intergenic	not near genes	chrX	6395270	intergenic	not near genes	chrX	6397693	intergenic	not near genes	chrX_10_6395001	chrX_6395001	SF447_1-HE
2661	chrX	6445334	6445336	chrX	6451118	6451120	297	4	5784	4.0	7.5	5.8	0.6	5786	chrX	6445334	intron	CG42340 -	chrX	6448227	intron	CG42340 -	chrX	6451120	intron	CG42340 -	chrX_4_6445001	chrX_6445001	SF447_1-HE
2665	chrX	6562799	6562849	chrX	6571303	6571357	Tirant	15	8507	1.5	2.5	2.0	5.0	8558	chrX	6562799	intron	CG34417 +	chrX	6567078	intron	CG34417 +	chrX	6571357	intron	CG34417 +	chrX_15_6565001	chrX_6565001	SF447_1-HE
2675	chrX	7023577	7023617	chrX	7030993	7031032	Tabor	6	7416	0.0	0.5	0.2	5.0	7455	chrX	7023577	intron	CG12541 -	chrX	7027304	intron	CG12541 -	chrX	7031032	intron	CG12541 -	chrX_6_7025001	chrX_7025001	SF447_1-HE
2686	chrX	7702885	7702920	chrX	7703349	7703385	jockey	22	465	12.0	9.0	10.5	1.9	500	chrX	7702885	intron	CHES-1-like -	chrX	7703135	intron	CHES-1-like -	chrX	7703385	intron	CHES-1-like -	chrX_22_7700001	chrX_7700001	SF447_1-HE
2689	chrX	7845699	7845740	chrX	7847216	7847257	hopper2	21	1516	10.0	0.5	5.2	3.4	1558	chrX	7845699	intergenic	not near genes	chrX	7846478	intergenic	not near genes	chrX	7847257	intergenic	not near genes	chrX_21_7845001	chrX_7845001	SF447_1-HE
2693	chrX	8031410	8031441	chrX	8035745	8035776	Juan	18	4335	12.0	11.0	11.5	1.4	4366	chrX	8031410	intergenic	not near genes	chrX	8033593	intergenic	not near genes	chrX	8035776	3` UTR	CG2233 -	chrX_18_8030001	chrX_8030001	SF447_1-HE
2697	chrX	8364826	8364876	chrX	8365249	8365299	BS	16	423	9.0	6.5	7.8	1.8	473	chrX	8364826	intron	nAChRalpha3 -	chrX	8365062	intron	nAChRalpha3 -	chrX	8365299	intron	nAChRalpha3 -	chrX_16_8365001	chrX_8365001	SF447_1-HE
2707	chrX	8948745	8948782	chrX	8956281	8956318	roo	7	7536	0.5	4.5	2.5	2.0	7573	chrX	8948745	intron	rdgA +	chrX	8952532	intron	rdgA +	chrX	8956318	intron	rdgA +	chrX_7_8950001	chrX_8950001	SF447_1-HE
2722	chrX	9508115	9508152	chrX	9509659	9509696	jockey	11	1544	6.5	5.0	5.8	1.6	1581	chrX	9508115	intron	CG32700 -	chrX	9508906	intron	CG32700 -	chrX	9509696	intron	CG32700 -	chrX_11_9505001	chrX_9505001	SF447_1-HE
2724	chrX	9575764	9575818	chrX	9576114	9576168	mdg3	15	349	5.5	2.0	3.8	3.1	404	chrX	9575764	intron,exon	CG32699 -,CG42395 -	chrX	9575966	intron,intron	CG32699 -,CG42395 -	chrX	9576168	intron,5` UTR	CG32699 -,CG42395 -	chrX_15_9575001	chrX_9575001	SF447_1-HE
2733	chrX	10138190	10138247	chrX	10145720	10145777	412	18	7530	6.5	3.5	5.0	3.0	7587	chrX	10138190	intron,intron	RhoU +,CR44894 -	chrX	10141984	intron,intron	RhoU +,CR44894 -	chrX	10145777	intron,intron	RhoU +,CR44894 -	chrX_18_10140001	chrX_10140001	SF447_1-HE
2736	chrX	10267296	10267330	chrX	10276472	10276506	roo	6	9176	0.0	2.5	1.2	2.7	9210	chrX	10267296	3` UTR	alpha-Man-I -	chrX	10271901	intron	alpha-Man-I -	chrX	10276506	3` UTR	alpha-Man-I -	chrX_6_10270001	chrX_10270001	SF447_1-HE
2742	chrX	10550841	10550877	chrX	10552333	10552370	hobo	12	1493	3.0	3.0	3.0	3.0	1529	chrX	10550841	intron	spri -	chrX	10551606	intron	spri -	chrX	10552370	intron	spri -	chrX_12_10550001	chrX_10550001	SF447_1-HE
2745	chrX	10686033	10686076	chrX	10691196	10691239	roo	20	5163	4.5	5.5	5.0	3.3	5206	chrX	10686033	intron	X11Lbeta +	chrX	10688636	intron	X11Lbeta +	chrX	10691239	intron	X11Lbeta +	chrX_20_10685001	chrX_10685001	SF447_1-HE
2754	chrX	11268557	11268595	chrX	11270076	11270094	hopper2	4	1509	1.5	2.5	2.0	1.3	1537	chrX	11268557	intron	CG44422 -	chrX	11269326	intron	CG44422 -	chrX	11270094	intron	CG44422 -	chrX_4_11265001	chrX_11265001	SF447_1-HE
2757	chrX	11312043	11312063	chrX	11319422	11319442	Stalker2	4	7379	3.0	3.0	3.0	1.0	7399	chrX	11312043	intergenic	not near genes	chrX	11315742	intergenic	not near genes	chrX	11319442	intergenic	not near genes	chrX_4_11315001	chrX_11315001	SF447_1-HE
2760	chrX	11571430	11571478	chrX	11571697	11571745	pogo	10	267	4.0	1.0	2.5	2.9	315	chrX	11571430	3` UTR	Kmn1 -	chrX	11571588	3` UTR	Kmn1 -	chrX	11571745	3` UTR	Kmn1 -	chrX_10_11570001	chrX_11570001	SF447_1-HE
2761	chrX	11633393	11633446	chrX	11640473	11640526	297	26	7080	7.5	7.0	7.2	3.2	7133	chrX	11633393	intron	Ptp10D +	chrX	11636960	intron	Ptp10D +	chrX	11640526	intron	Ptp10D +	chrX_26_11635001	chrX_11635001	SF447_1-HE
2762	chrX	11645091	11645135	chrX	11648287	11648331	NOF	8	3196	5.0	3.0	4.0	1.6	3240	chrX	11645091	intron	Ptp10D +	chrX	11646711	intron	Ptp10D +	chrX	11648331	intron	Ptp10D +	chrX_8_11645001	chrX_11645001	SF447_1-HE
2768	chrX	12168113	12168165	chrX	12173581	12173617	I-element	10	5466	2.0	4.5	3.2	2.4	5504	chrX	12168113	intron	Ten-a +	chrX	12170865	intron	Ten-a +	chrX	12173617	intron	Ten-a +	chrX_10_12170001	chrX_12170001	SF447_1-HE
2773	chrX	12301931	12301973	chrX	12303263	12303289	X-element	16	1328	6.0	4.5	5.2	2.6	1358	chrX	12301931	intron	Ten-a +	chrX	12302610	intron	Ten-a +	chrX	12303289	intron	Ten-a +	chrX_16_12300001	chrX_12300001	SF447_1-HE
2804	chrX	13401458	13401512	chrX	13401836	13401886	jockey	4	377	1.0	0.5	0.8	2.2	428	chrX	13401458	intergenic	CG1673 +,CG12725 -	chrX	13401672	intergenic	CG12725 -,CG1673 +	chrX	13401886	3` UTR	CG12725 -	chrX_4_13400001	chrX_13400001	SF447_1-HE
2808	chrX	13463628	13463678	chrX	13469231	13469281	mdg3	18	5603	1.5	2.0	1.8	6.4	5653	chrX	13463628	intron	Neto +	chrX	13466454	intron	Neto +	chrX	13469281	intron	Neto +	chrX_18_13465001	chrX_13465001	SF447_1-HE
2825	chrX	14030722	14030778	chrX	14035336	14035385	copia	5	4606	0.0	4.5	2.2	1.6	4663	chrX	14030722	intergenic	not near genes	chrX	14033054	intergenic	not near genes	chrX	14035385	intergenic	not near genes	chrX_5_14030001	chrX_14030001	SF447_1-HE
2826	chrX	14105011	14105051	chrX	14114180	14114227	roo	14	9176	3.0	7.0	5.0	2.3	9216	chrX	14105011	intergenic	not near genes	chrX	14109619	intergenic	not near genes	chrX	14114227	5` UTR	CR44657 +	chrX_14_14105001	chrX_14105001	SF447_1-HE
2829	chrX	14157579	14157593	chrX	14163262	14163276	297	4	5683	4.0	2.0	3.0	1.0	5697	chrX	14157579	intergenic	not near genes	chrX	14160428	intergenic	not near genes	chrX	14163276	intergenic	not near genes	chrX_4_14160001	chrX_14160001	SF447_1-HE
2835	chrX	14416283	14416317	chrX	14421077	14421111	F-element	10	4794	4.0	4.0	4.0	2.0	4828	chrX	14416283	intron	dpr8 +	chrX	14418697	intron	dpr8 +	chrX	14421111	intron	dpr8 +	chrX_10_14415001	chrX_14415001	SF447_1-HE
2838	chrX	14636439	14636480	chrX	14641906	14641947	I-element	12	5467	5.0	8.0	6.5	1.6	5508	chrX	14636439	intron	NetA -	chrX	14639193	intron	NetA -	chrX	14641947	intron	NetA -	chrX_12_14635001	chrX_14635001	SF447_1-HE
2845	chrX	14778021	14778050	chrX	14782844	14782866	Doc	6	4822	5.0	7.5	6.2	0.8	4845	chrX	14778021	intergenic	CG5347 +	chrX	14780444	intergenic	not near genes	chrX	14782866	intergenic	Ag5r2 -	chrX_6_14780001	chrX_14780001	SF447_1-HE
2847	chrX	14818763	14818794	chrX	14823972	14824020	copia	9	5227	1.5	3.0	2.2	2.8	5257	chrX	14818763	intron	rut -	chrX	14821392	intron	rut -	chrX	14824020	intron	rut -	chrX_9_14820001	chrX_14820001	SF447_1-HE
2850	chrX	14936828	14936844	chrX	14946125	14946141	roo	5	9295	1.0	0.0	0.5	3.3	9313	chrX	14936828	intron	pdgy -	chrX	14941484	intron	pdgy -	chrX	14946141	intron	pdgy -	chrX_5_14940001	chrX_14940001	SF447_1-HE
2857	chrX	15273687	15273730	chrX	15274880	15274922	1360	8	1191	8.5	7.0	7.8	0.9	1235	chrX	15273687	intergenic	not near genes	chrX	15274304	intergenic	not near genes	chrX	15274922	intergenic	not near genes	chrX_8_15270001	chrX_15270001	SF447_1-HE
2858	chrX	15413032	15413078	chrX	15417360	15417406	Juan	16	4328	4.0	10.5	7.2	2.0	4374	chrX	15413032	intron	Cngl -	chrX	15415219	intron	Cngl -	chrX	15417406	intron	Cngl -	chrX_16_15415001	chrX_15415001	SF447_1-HE
2859	chrX	15421896	15421945	chrX	15423433	15423477	pogo	11	1536	4.0	2.0	3.0	2.8	1581	chrX	15421896	intron	Cngl -	chrX	15422686	intron	Cngl -	chrX	15423477	intron	Cngl -	chrX_11_15420001	chrX_15420001	SF447_1-HE
2861	chrX	15435689	15435701	chrX	15436148	15436160	rover	5	459	0.0	18.0	9.0	0.5	471	chrX	15435689	intron	Cngl -	chrX	15435924	intron	Cngl -	chrX	15436160	intron	Cngl -	chrX_5_15435001	chrX_15435001	SF447_1-HE
2878	chrX	16222761	16222805	chrX	16231137	16231181	roo	9	8376	1.0	3.5	2.2	2.8	8420	chrX	16222761	intergenic	not near genes	chrX	16226971	intergenic	not near genes	chrX	16231181	intergenic	not near genes	chrX_9_16225001	chrX_16225001	SF447_1-HE
2882	chrX	16340654	16340660	chrX	16349824	16349830	roo	4	9170	0.5	0.5	0.5	2.7	9176	chrX	16340654	intergenic	Dsp1 +	chrX	16345242	intergenic	not near genes	chrX	16349830	intergenic	sl +	chrX_4_16345001	chrX_16345001	SF447_1-HE
2886	chrX	16492622	16492675	chrX	16498225	16498276	mdg3	23	5603	11.0	14.0	12.5	1.7	5654	chrX	16492622	intron	para -	chrX	16495449	intron	para -	chrX	16498276	exon	para -	chrX_23_16495001	chrX_16495001	SF447_1-HE
2927	chrX	17792929	17792945	chrX	17796253	17796265	flea	4	3323	10.5	7.5	9.0	0.4	3336	chrX	17792929	intron	OdsH +	chrX	17794597	intron	OdsH +	chrX	17796265	intron	OdsH +	chrX_4_17790001	chrX_17790001	SF447_1-HE
2944	chrX	18194052	18194101	chrX	18194605	18194655	BS	13	560	6.5	7.0	6.8	1.7	603	chrX	18194052	intron	Frq2 +	chrX	18194354	intron	Frq2 +	chrX	18194655	intron	Frq2 +	chrX_13_18190001	chrX_18190001	SF447_1-HE
2950	chrX	18429473	18429519	chrX	18434810	18434856	Transpac	13	5336	0.0	7.5	3.8	2.7	5383	chrX	18429473	intergenic	not near genes	chrX	18432164	intergenic	not near genes	chrX	18434856	intergenic	not near genes	chrX_13_18430001	chrX_18430001	SF447_1-HE
2953	chrX	18555354	18555405	chrX	18556901	18556952	transib2	8	1546	5.0	3.0	4.0	1.6	1598	chrX	18555354	intron	Bx +	chrX	18556153	intron	Bx +	chrX	18556952	intron	Bx +	chrX_8_18555001	chrX_18555001	SF447_1-HE
2965	chrX	18957054	18957072	chrX	18965736	18965754	roo	5	8680	2.0	0.0	1.0	2.5	8700	chrX	18957054	intron	CG43759 +	chrX	18961404	intron	CG43759 +	chrX	18965754	intron	CG43759 +	chrX_5_18960001	chrX_18960001	SF447_1-HE
2970	chrX	19060392	19060437	chrX	19065202	19065247	Doc	8	4809	5.5	8.0	6.8	1.0	4855	chrX	19060392	intron	CG14190 +	chrX	19062820	intron	CG14190 +	chrX	19065247	intron	CG14190 +	chrX_8_19060001	chrX_19060001	SF447_1-HE
2974	chrX	19136542	19136582	chrX	19143482	19143527	412	10	6940	4.5	2.5	3.5	2.2	6985	chrX	19136542	intergenic	not near genes	chrX	19140034	intergenic	not near genes	chrX	19143527	3` UTR	RhoGAP18B -	chrX_10_19140001	chrX_19140001	SF447_1-HE
2978	chrX	19356973	19357023	chrX	19358439	19358508	NOF	10	1476	3.5	0.0	1.8	3.6	1535	chrX	19356973	intron	kek5 +	chrX	19357740	intron	kek5 +	chrX	19358508	intron	kek5 +	chrX_10_19355001	chrX_19355001	SF447_1-HE
2981	chrX	19380146	19380184	chrX	19380414	19380452	pogo	8	268	6.5	4.0	5.2	1.3	306	chrX	19380146	intron	kek5 +	chrX	19380299	intron	kek5 +	chrX	19380452	intron	kek5 +	chrX_8_19380001	chrX_19380001	SF447_1-HE
2984	chrX	19472111	19472159	chrX	19472707	19472719	jockey	6	585	0.5	4.0	2.2	1.9	608	chrX	19472111	intergenic	kek5 +	chrX	19472415	intergenic	not near genes	chrX	19472719	intergenic	not near genes	chrX_6_19470001	chrX_19470001	SF447_1-HE
2990	chrX	19710047	19710102	chrX	19711859	19711897	S-element	16	1811	4.0	3.0	3.5	3.6	1850	chrX	19710047	intron	meso18E -	chrX	19710972	intron	meso18E -	chrX	19711897	intron	meso18E -	chrX_16_19710001	chrX_19710001	SF447_1-HE
2996	chrX	19797325	19797338	chrX	19804664	19804677	Stalker4	13	7339	22.0	9.5	15.8	0.8	7352	chrX	19797325	intergenic	not near genes	chrX	19801001	intergenic	not near genes	chrX	19804677	intergenic	not near genes	chrX_13_19800001	chrX_19800001	SF447_1-HE
3029	chrX	20377277	20377333	chrX	20378782	20378826	hobo	5	1498	0.0	2.5	1.2	2.3	1549	chrX	20377277	intergenic	not near genes	chrX	20378052	intergenic	not near genes	chrX	20378826	intergenic	not near genes	chrX_5_20375001	chrX_20375001	SF447_1-HE
3036	chrX	20504104	20504152	chrX	20505651	20505699	transib2	12	1546	6.5	5.5	6.0	1.7	1595	chrX	20504104	intron	RhoGAP19D -	chrX	20504902	intron	RhoGAP19D -	chrX	20505699	intron	RhoGAP19D -	chrX_12_20500001	chrX_20500001	SF447_1-HE
3058	chrX	21086130	21086153	chrX	21087185	21087208	jockey	5	1055	2.5	6.0	4.2	1.0	1078	chrX	21086130	intergenic	not near genes	chrX	21086669	intergenic	not near genes	chrX	21087208	intergenic	not near genes	chrX_5_21085001	chrX_21085001	SF447_1-HE
3065	chrX	21254678	21254718	chrX	21255290	21255387	hopper2	19	648	8.0	0.5	4.2	3.7	709	chrX	21254678	intron	CG32521 -	chrX	21255032	intron	CG32521 -	chrX	21255387	intron	CG32521 -	chrX_19_21255001	chrX_21255001	SF447_1-HE
3078	chrX	21458668	21458726	chrX	21464130	21464188	Ivk	8	5462	3.0	7.5	5.2	1.3	5520	chrX	21458668	intergenic	not near genes	chrX	21461428	intergenic	not near genes	chrX	21464188	intergenic	not near genes	chrX_8_21460001	chrX_21460001	SF447_1-HE
3080	chrX	21474382	21474429	chrX	21474773	21474817	1731	14	391	4.0	6.0	5.0	2.3	435	chrX	21474382	intergenic	not near genes	chrX	21474600	intergenic	not near genes	chrX	21474817	intergenic	not near genes	chrX_14_21470001	chrX_21470001	SF447_1-HE
3090	chrX	22681461	22681482	chrX	22688943	22688966	HMS-Beagle2	18	7483	17.5	5.5	11.5	1.4	7505	chrX	22681461	intron	CR44997 +	chrX	22685214	intron	CR44997 +	chrX	22688966	intron	CR44997 +	chrX_18_22685001	chrX_22685001	SF447_1-HE
3091	chrX	22681494	22681516	chrX	22688940	22689000	HMS-Beagle2	8	7479	8.5	4.0	6.2	1.1	7506	chrX	22681494	intron	CR44997 +	chrX	22685247	intron	CR44997 +	chrX	22689000	intron	CR44997 +	chrX_8_22685001	chrX_22685001	SF447_1-HE
3094	chrX	22697477	22697528	chrX	22701814	22701865	Juan	19	4336	2.5	2.5	2.5	5.4	4388	chrX	22697477	intron	CR44997 +	chrX	22699671	intron	CR44997 +	chrX	22701865	intron	CR44997 +	chrX_19_22695001	chrX_22695001	SF447_1-HE
3098	chrX	22811955	22812005	chrX	22816762	22816804	F-element	9	4804	5.0	4.5	4.8	1.6	4849	chrX	22811955	intergenic	CG12446 -	chrX	22814380	intergenic	not near genes	chrX	22816804	intergenic	not near genes	chrX_9_22810001	chrX_22810001	SF447_1-HE
3110	chrX	22987089	22987125	chrX	22989774	22989810	Burdock	5	2685	0.5	1.5	1.0	2.5	2721	chrX	22987089	intron,intron	stnA -,stnB -	chrX	22988450	intron,intron	stnA -,stnB -	chrX	22989810	intron,intron	stnA -,stnB -	chrX_5_22985001	chrX_22985001	SF447_1-HE
3111	chrX	22996299	22996325	chrX	23003557	23003583	roo	5	7258	3.0	2.5	2.8	1.3	7284	chrX	22996299	intron,intron	stnA -,stnB -	chrX	22999941	intron,intron	stnA -,stnB -	chrX	23003583	intron,intron	stnA -,stnB -	chrX_5_22995001	chrX_22995001	SF447_1-HE