SV#	Chr_5p	Chr_coord_5p_start	Chr_coord_5p_end	Chr_3p	Chr_coord_3p_start	Chr_coord_3p_end	repName	Reads_collapsed	avg_del_len	RefGen_3prime	Refgen_5prime	RefGen_Avg	Coverage_Ratio	size	Chr_5p	Chr_coord_5p	classification_5p	comment_5p	Chr_mid	Chr_coord_mid	classification_mid	comment_mid	Chr_3p	Chr_coord_3p	classification_3p	comment_3p	depletion_code	loci_code	libname
1	chr2L	47441	47475	chr2L	52572	52606	jockey	10	5131	4.5	9.0	6.8	1.3	5165	chr2L	47441	intron	Cda5 -	chr2L	50024	intron	Cda5 -	chr2L	52606	intron	Cda5 -	chr2L_10_50001	chr2L_50001	SF428_1-HE
7	chr2L	347870	347914	chr2L	355395	355439	blood	9	7526	1.0	2.5	1.8	3.2	7569	chr2L	347870	3` UTR	Plc21C +	chr2L	351654	intron	Plc21C +	chr2L	355439	3` UTR	Plc21C +	chr2L_9_350001	chr2L_350001	SF428_1-HE
11	chr2L	686912	686938	chr2L	695969	696004	roo	4	9064	3.0	1.5	2.2	1.2	9092	chr2L	686912	intron	ds -	chr2L	691458	intron	ds -	chr2L	696004	intron	ds -	chr2L_4_690001	chr2L_690001	SF428_1-HE
14	chr2L	770474	770491	chr2L	772258	772298	Bari1	5	1801	4.0	1.0	2.5	1.4	1824	chr2L	770474	intergenic	not near genes	chr2L	771386	intergenic	not near genes	chr2L	772298	intergenic	CR44614 +	chr2L_5_770001	chr2L_770001	SF428_1-HE
18	chr2L	976855	976912	chr2L	984517	984574	roo	6	7662	1.5	3.5	2.5	1.7	7719	chr2L	976855	intergenic	not near genes	chr2L	980714	intergenic	not near genes	chr2L	984574	intergenic	not near genes	chr2L_6_980001	chr2L_980001	SF428_1-HE
23	chr2L	1220105	1220162	chr2L	1227597	1227654	blood	7	7491	2.5	1.5	2.0	2.3	7549	chr2L	1220105	intron	CG42329 +	chr2L	1223880	intron	CG42329 +	chr2L	1227654	intron	CG42329 +	chr2L_7_1220001	chr2L_1220001	SF428_1-HE
28	chr2L	1301737	1301744	chr2L	1302300	1302307	gypsy	4	563	0.0	5.5	2.8	1.1	570	chr2L	1301737	intergenic	not near genes	chr2L	1302022	intergenic	not near genes	chr2L	1302307	intergenic	not near genes	chr2L_4_1300001	chr2L_1300001	SF428_1-HE
34	chr2L	1570667	1570715	chr2L	1573565	1573602	F-element	13	2897	5.0	11.0	8.0	1.4	2935	chr2L	1570667	intron	haf +	chr2L	1572134	intron	haf +	chr2L	1573602	intron	haf +	chr2L_13_1570001	chr2L_1570001	SF428_1-HE
36	chr2L	1678950	1679002	chr2L	1686441	1686492	blood	14	7490	5.0	2.5	3.8	2.9	7542	chr2L	1678950	intron	chinmo +	chr2L	1682721	intron	chinmo +	chr2L	1686492	intron	chinmo +	chr2L_14_1680001	chr2L_1680001	SF428_1-HE
37	chr2L	1711341	1711381	chr2L	1711691	1711731	mdg3	6	350	3.0	1.5	2.2	1.9	390	chr2L	1711341	3` UTR,3` UTR	mRpL48 +,frtz -	chr2L	1711536	3` UTR	frtz -	chr2L	1711731	3` UTR	frtz -	chr2L_6_1710001	chr2L_1710001	SF428_1-HE
47	chr2L	2100377	2100405	chr2L	2109549	2109552	roo	8	9166	2.5	7.0	4.8	1.4	9175	chr2L	2100377	intron	dpr3 -	chr2L	2104964	intron	dpr3 -	chr2L	2109552	intron	dpr3 -	chr2L_8_2100001	chr2L_2100001	SF428_1-HE
48	chr2L	2112085	2112140	chr2L	2119773	2119828	opus	14	7687	2.0	4.0	3.0	3.5	7743	chr2L	2112085	intergenic	not near genes	chr2L	2115956	intergenic	not near genes	chr2L	2119828	intergenic	not near genes	chr2L_14_2115001	chr2L_2115001	SF428_1-HE
55	chr2L	2294017	2294073	chr2L	2299247	2299304	copia	8	5228	0.5	2.0	1.2	3.6	5287	chr2L	2294017	intergenic	not near genes	chr2L	2296660	intergenic	not near genes	chr2L	2299304	intergenic	not near genes	chr2L_8_2295001	chr2L_2295001	SF428_1-HE
62	chr2L	2933273	2933315	chr2L	2935478	2935513	pogo	7	2204	11.0	8.0	9.5	0.7	2240	chr2L	2933273	intron	lilli +	chr2L	2934393	intron	lilli +	chr2L	2935513	intron	lilli +	chr2L_7_2930001	chr2L_2930001	SF428_1-HE
66	chr2L	3202721	3202769	chr2L	3210176	3210224	mdg1	10	7455	1.5	0.0	0.8	5.6	7503	chr2L	3202721	intergenic	not near genes	chr2L	3206472	intergenic	not near genes	chr2L	3210224	intergenic	CR45336 +	chr2L_10_3205001	chr2L_3205001	SF428_1-HE
68	chr2L	3251474	3251521	chr2L	3259065	3259111	springer	9	7590	0.5	2.0	1.2	4.1	7637	chr2L	3251474	intergenic	not near genes	chr2L	3255292	intergenic	not near genes	chr2L	3259111	intergenic	not near genes	chr2L_9_3255001	chr2L_3255001	SF428_1-HE
72	chr2L	3388582	3388627	chr2L	3388849	3388894	pogo	7	267	2.5	3.5	3.0	1.8	312	chr2L	3388582	intergenic	CG42460 -	chr2L	3388738	intergenic	CG42460 -	chr2L	3388894	intergenic	CG42460 -,CR44791 +	chr2L_7_3385001	chr2L_3385001	SF428_1-HE
90	chr2L	4066020	4066063	chr2L	4068871	4068913	Juan	7	2851	2.5	6.0	4.2	1.3	2893	chr2L	4066020	intron	ed +	chr2L	4067466	intron	ed +	chr2L	4068913	intron	ed +	chr2L_7_4065001	chr2L_4065001	SF428_1-HE
101	chr2L	4601692	4601736	chr2L	4609159	4609203	mdg1	8	7467	2.5	1.5	2.0	2.7	7511	chr2L	4601692	intron	dp -	chr2L	4605448	intron	dp -	chr2L	4609203	intron	dp -	chr2L_8_4605001	chr2L_4605001	SF428_1-HE
123	chr2L	5827687	5827729	chr2L	5836721	5836762	roo	8	9034	1.0	1.0	1.0	4.0	9075	chr2L	5827687	intron	TrissinR +	chr2L	5832224	intron	TrissinR +	chr2L	5836762	intron	TrissinR +	chr2L_8_5830001	chr2L_5830001	SF428_1-HE
142	chr2L	6876775	6876798	chr2L	6882976	6883014	diver	5	6212	3.5	2.0	2.8	1.3	6239	chr2L	6876775	intron	Nlg2 +	chr2L	6879894	intron	Nlg2 +	chr2L	6883014	intron	Nlg2 +	chr2L_5_6875001	chr2L_6875001	SF428_1-HE
152	chr2L	7343312	7343358	chr2L	7350454	7350499	roo	6	7138	5.0	4.0	4.5	1.1	7187	chr2L	7343312	intron	Wnt6 +	chr2L	7346906	intron	Wnt6 +	chr2L	7350499	intron	Wnt6 +	chr2L_6_7345001	chr2L_7345001	SF428_1-HE
171	chr2L	7977074	7977111	chr2L	7984064	7984112	297	9	6997	2.5	4.5	3.5	2.0	7038	chr2L	7977074	intron	Snoo -	chr2L	7980593	intron	Snoo -	chr2L	7984112	intron,5` UTR	Snoo -,CG7231 +	chr2L_9_7980001	chr2L_7980001	SF428_1-HE
183	chr2L	8452399	8452446	chr2L	8461596	8461643	roo	9	9197	3.0	2.0	2.5	2.6	9244	chr2L	8452399	intron	fu12 -	chr2L	8457021	intron	fu12 -	chr2L	8461643	intron	fu12 -	chr2L_9_8455001	chr2L_8455001	SF428_1-HE
191	chr2L	8723098	8723143	chr2L	8731501	8731536	Tirant	6	8401	4.0	4.5	4.2	1.2	8438	chr2L	8723098	intron	raw -	chr2L	8727317	intron	raw -	chr2L	8731536	intron	raw -	chr2L_6_8725001	chr2L_8725001	SF428_1-HE
195	chr2L	9000266	9000300	chr2L	9007802	9007836	roo	5	7536	4.5	0.0	2.2	1.6	7570	chr2L	9000266	intergenic	Try29F +	chr2L	9004051	intergenic	not near genes	chr2L	9007836	intergenic	not near genes	chr2L_5_9000001	chr2L_9000001	SF428_1-HE
204	chr2L	9217956	9217999	chr2L	9222779	9222830	Doc	7	4826	1.0	0.0	0.5	4.7	4874	chr2L	9217956	intron	tai +	chr2L	9220393	intron	tai +	chr2L	9222830	intron	tai +	chr2L_7_9220001	chr2L_9220001	SF428_1-HE
210	chr2L	9393473	9393504	chr2L	9396467	9396497	jockey	5	2993	3.5	2.0	2.8	1.3	3024	chr2L	9393473	intron	Shawl -	chr2L	9394985	intron	Shawl -	chr2L	9396497	intron	Shawl -	chr2L_5_9390001	chr2L_9390001	SF428_1-HE
221	chr2L	9770757	9770775	chr2L	9770876	9770893	1360	4	116	2.5	1.0	1.8	1.4	136	chr2L	9770757	intron	ppk18 -	chr2L	9770825	intron	ppk18 -	chr2L	9770893	exon	ppk18 -	chr2L_4_9770001	chr2L_9770001	SF428_1-HE
225	chr2L	9973724	9973749	chr2L	9980864	9980894	HMS-Beagle	5	7144	3.5	2.5	3.0	1.2	7170	chr2L	9973724	intergenic	not near genes	chr2L	9977309	intergenic	not near genes	chr2L	9980894	intergenic	not near genes	chr2L_5_9975001	chr2L_9975001	SF428_1-HE
239	chr2L	10592816	10592867	chr2L	10600504	10600555	opus	9	7688	4.0	2.0	3.0	2.2	7739	chr2L	10592816	intron	Trim9 +	chr2L	10596686	intron	Trim9 +	chr2L	10600555	intron	Trim9 +	chr2L_9_10595001	chr2L_10595001	SF428_1-HE
247	chr2L	10946927	10946972	chr2L	10956168	10956213	roo	4	9241	2.0	3.5	2.8	1.1	9286	chr2L	10946927	intron	dpr2 -	chr2L	10951570	intron	dpr2 -	chr2L	10956213	intron	dpr2 -	chr2L_4_10950001	chr2L_10950001	SF428_1-HE
256	chr2L	11315246	11315272	chr2L	11317676	11317686	G2	7	2427	1.0	3.0	2.0	2.3	2440	chr2L	11315246	intergenic	not near genes	chr2L	11316466	intergenic	not near genes	chr2L	11317686	intergenic	not near genes	chr2L_7_11315001	chr2L_11315001	SF428_1-HE
264	chr2L	11563624	11563657	chr2L	11568854	11568887	copia	5	5230	2.5	3.5	3.0	1.2	5263	chr2L	11563624	intergenic	not near genes	chr2L	11566256	intergenic	not near genes	chr2L	11568887	intergenic	not near genes	chr2L_5_11565001	chr2L_11565001	SF428_1-HE
266	chr2L	11614036	11614078	chr2L	11615555	11615599	hopper2	8	1520	4.0	3.0	3.5	1.8	1563	chr2L	11614036	intron	kek2 +	chr2L	11614818	intron	kek2 +	chr2L	11615599	intron	kek2 +	chr2L_8_11610001	chr2L_11610001	SF428_1-HE
277	chr2L	12067312	12067350	chr2L	12074390	12074428	297	5	7078	1.5	0.5	1.0	2.5	7116	chr2L	12067312	intergenic	not near genes	chr2L	12070870	intergenic	not near genes	chr2L	12074428	intergenic	not near genes	chr2L_5_12070001	chr2L_12070001	SF428_1-HE
294	chr2L	12558305	12558351	chr2L	12565460	12565506	HMS-Beagle	9	7155	1.0	2.5	1.8	3.2	7201	chr2L	12558305	intergenic	not near genes	chr2L	12561906	intergenic	not near genes	chr2L	12565506	intergenic	not near genes	chr2L_9_12560001	chr2L_12560001	SF428_1-HE
299	chr2L	12731048	12731081	chr2L	12735841	12735874	F-element	5	4793	2.0	2.0	2.0	1.7	4826	chr2L	12731048	intron	MRP +	chr2L	12733461	intron	MRP +	chr2L	12735874	intron	MRP +	chr2L_5_12730001	chr2L_12730001	SF428_1-HE
301	chr2L	12781777	12781814	chr2L	12789246	12789279	Quasimodo	7	7468	14.0	5.0	9.5	0.7	7502	chr2L	12781777	intergenic	not near genes	chr2L	12785528	intergenic	not near genes	chr2L	12789279	intergenic	not near genes	chr2L_7_12785001	chr2L_12785001	SF428_1-HE
302	chr2L	12791589	12791628	chr2L	12795290	12795329	F-element	16	3701	6.0	6.5	6.2	2.2	3740	chr2L	12791589	intergenic	not near genes	chr2L	12793459	intergenic	not near genes	chr2L	12795329	intergenic	not near genes	chr2L_16_12790001	chr2L_12790001	SF428_1-HE
305	chr2L	12861681	12861717	chr2L	12863174	12863210	hobo	5	1491	3.0	3.0	3.0	1.2	1529	chr2L	12861681	intergenic	not near genes	chr2L	12862446	intergenic	not near genes	chr2L	12863210	intergenic	not near genes	chr2L_5_12860001	chr2L_12860001	SF428_1-HE
306	chr2L	12894009	12894051	chr2L	12895502	12895532	hobo	15	1492	3.5	8.0	5.8	2.2	1523	chr2L	12894009	intergenic	not near genes	chr2L	12894770	intergenic	not near genes	chr2L	12895532	intergenic	not near genes	chr2L_15_12890001	chr2L_12890001	SF428_1-HE
307	chr2L	12933828	12933867	chr2L	12941321	12941360	blood	8	7493	3.0	3.0	3.0	2.0	7532	chr2L	12933828	intergenic	not near genes	chr2L	12937594	intergenic	not near genes	chr2L	12941360	intergenic	not near genes	chr2L_8_12935001	chr2L_12935001	SF428_1-HE
309	chr2L	13036225	13036265	chr2L	13036493	13036533	X-element	7	268	1.0	2.5	1.8	2.5	308	chr2L	13036225	intron	CG9932 -	chr2L	13036379	intron	CG9932 -	chr2L	13036533	intron	CG9932 -	chr2L_7_13035001	chr2L_13035001	SF428_1-HE
312	chr2L	13405624	13405669	chr2L	13410447	13410492	Doc	8	4823	1.5	0.5	1.0	4.0	4868	chr2L	13405624	exon	CG7110 +	chr2L	13408058	intron	CG7110 +	chr2L	13410492	intron	CG7110 +	chr2L_8_13405001	chr2L_13405001	SF428_1-HE
313	chr2L	13481430	13481468	chr2L	13482063	13482101	jockey	11	633	19.0	18.5	18.8	0.6	671	chr2L	13481430	intron	CG42784 +	chr2L	13481766	intron	CG42784 +	chr2L	13482101	intron	CG42784 +	chr2L_11_13480001	chr2L_13480001	SF428_1-HE
315	chr2L	13560380	13560420	chr2L	13565227	13565267	F-element	8	4847	3.5	3.5	3.5	1.8	4887	chr2L	13560380	intron	kuz +	chr2L	13562824	intron	kuz +	chr2L	13565267	intron	kuz +	chr2L_8_13560001	chr2L_13560001	SF428_1-HE
320	chr2L	13761806	13761829	chr2L	13762943	13762955	Doc	6	1135	1.5	4.5	3.0	1.5	1149	chr2L	13761806	intron	TM9SF4 +	chr2L	13762380	intron	TM9SF4 +	chr2L	13762955	intron	TM9SF4 +	chr2L_6_13760001	chr2L_13760001	SF428_1-HE
322	chr2L	13853070	13853107	chr2L	13862241	13862283	roo	6	9175	3.5	1.5	2.5	1.7	9213	chr2L	13853070	intron	CenG1A +	chr2L	13857676	intron	CenG1A +	chr2L	13862283	intron	CenG1A +	chr2L_6_13855001	chr2L_13855001	SF428_1-HE
343	chr2L	14803855	14803908	chr2L	14809084	14809137	copia	12	5229	1.5	3.5	2.5	3.4	5282	chr2L	14803855	intergenic	not near genes	chr2L	14806496	intergenic	not near genes	chr2L	14809137	intergenic	not near genes	chr2L_12_14805001	chr2L_14805001	SF428_1-HE
347	chr2L	14889926	14889979	chr2L	14890377	14890430	jockey	18	451	4.0	1.0	2.5	5.1	504	chr2L	14889926	intergenic	not near genes	chr2L	14890178	intergenic	not near genes	chr2L	14890430	intergenic	not near genes	chr2L_18_14890001	chr2L_14890001	SF428_1-HE
348	chr2L	14984369	14984392	chr2L	14991995	14992018	opus	5	7626	2.0	1.5	1.8	1.8	7649	chr2L	14984369	intron	mol -	chr2L	14988194	intron	mol -	chr2L	14992018	intron	mol -	chr2L_5_14985001	chr2L_14985001	SF428_1-HE
361	chr2L	15446027	15446080	chr2L	15453522	15453574	blood	10	7494	1.0	1.0	1.0	5.0	7547	chr2L	15446027	intergenic	not near genes	chr2L	15449800	intergenic	not near genes	chr2L	15453574	intergenic	not near genes	chr2L_10_15445001	chr2L_15445001	SF428_1-HE
365	chr2L	15586385	15586436	chr2L	15593463	15593513	297	7	7078	0.5	1.5	1.0	3.5	7128	chr2L	15586385	intergenic	not near genes	chr2L	15589949	intergenic	not near genes	chr2L	15593513	intergenic	not near genes	chr2L_7_15585001	chr2L_15585001	SF428_1-HE
370	chr2L	15956004	15956048	chr2L	15957497	15957541	hobo	8	1492	6.0	4.5	5.2	1.3	1537	chr2L	15956004	intron	beat-Ib -	chr2L	15956772	intron	beat-Ib -	chr2L	15957541	intron	beat-Ib -	chr2L_8_15955001	chr2L_15955001	SF428_1-HE
373	chr2L	16141147	16141188	chr2L	16146380	16146421	copia	9	5233	6.0	5.5	5.8	1.3	5274	chr2L	16141147	intergenic	not near genes	chr2L	16143784	intergenic	not near genes	chr2L	16146421	intergenic	not near genes	chr2L_9_16140001	chr2L_16140001	SF428_1-HE
374	chr2L	16153708	16153762	chr2L	16160788	16160839	297	24	7080	5.5	5.5	5.5	3.7	7131	chr2L	16153708	intergenic	not near genes	chr2L	16157274	intergenic	not near genes	chr2L	16160839	intergenic	not near genes	chr2L_24_16155001	chr2L_16155001	SF428_1-HE
380	chr2L	16280239	16280283	chr2L	16281433	16281477	1360	6	1191	3.5	3.5	3.5	1.3	1238	chr2L	16280239	intron	crp -	chr2L	16280858	intron	crp -	chr2L	16281477	intron	crp -	chr2L_6_16280001	chr2L_16280001	SF428_1-HE
385	chr2L	16511939	16511980	chr2L	16519079	16519120	HMS-Beagle	8	7140	1.0	2.0	1.5	3.2	7181	chr2L	16511939	intron	CG5953 -	chr2L	16515530	intron	CG5953 -	chr2L	16519120	intron	CG5953 -	chr2L_8_16515001	chr2L_16515001	SF428_1-HE
392	chr2L	16958089	16958126	chr2L	16962903	16962940	Doc	8	4813	4.5	3.0	3.8	1.7	4851	chr2L	16958089	intergenic	not near genes	chr2L	16960514	intergenic	not near genes	chr2L	16962940	intergenic	not near genes	chr2L_8_16960001	chr2L_16960001	SF428_1-HE
399	chr2L	17167576	17167591	chr2L	17167843	17167858	pogo	4	267	1.0	4.0	2.5	1.1	282	chr2L	17167576	intron,intron	CG34106 +,beat-IIIa +	chr2L	17167717	intron,intron	CG34106 +,beat-IIIa +	chr2L	17167858	intron,intron	CG34106 +,beat-IIIa +	chr2L_4_17165001	chr2L_17165001	SF428_1-HE
401	chr2L	17199137	17199191	chr2L	17200630	17200684	hobo	10	1493	1.0	1.5	1.2	4.5	1547	chr2L	17199137	intron	beat-IIIc -	chr2L	17199910	intron	beat-IIIc -	chr2L	17200684	intron	beat-IIIc -	chr2L_10_17195001	chr2L_17195001	SF428_1-HE
405	chr2L	17273178	17273220	chr2L	17277986	17278025	F-element	11	4808	2.0	3.5	2.8	2.9	4847	chr2L	17273178	intergenic	not near genes	chr2L	17275602	intergenic	not near genes	chr2L	17278025	intergenic	not near genes	chr2L_11_17275001	chr2L_17275001	SF428_1-HE
410	chr2L	17687491	17687519	chr2L	17692262	17692290	F-element	10	4771	3.5	3.5	3.5	2.2	4799	chr2L	17687491	intron	CadN -	chr2L	17689890	intron	CadN -	chr2L	17692290	intron	CadN -	chr2L_10_17685001	chr2L_17685001	SF428_1-HE
413	chr2L	17727843	17727870	chr2L	17729336	17729363	hobo	10	1493	3.0	5.0	4.0	2.0	1520	chr2L	17727843	intron	CadN -	chr2L	17728603	intron	CadN -	chr2L	17729363	intron	CadN -	chr2L_10_17725001	chr2L_17725001	SF428_1-HE
417	chr2L	17819896	17819947	chr2L	17825124	17825176	copia	11	5226	2.5	5.0	3.8	2.3	5280	chr2L	17819896	intron	CadN2 -	chr2L	17822536	intron	CadN2 -	chr2L	17825176	intron	CadN2 -	chr2L_11_17820001	chr2L_17820001	SF428_1-HE
418	chr2L	17951931	17951976	chr2L	17953417	17953469	hobo	5	1492	4.5	4.0	4.2	1.0	1538	chr2L	17951931	intergenic	CR44398 -,CR44397 -	chr2L	17952700	intergenic	not near genes	chr2L	17953469	intergenic	not near genes	chr2L_5_17950001	chr2L_17950001	SF428_1-HE
421	chr2L	18051857	18051906	chr2L	18061030	18061079	roo	12	9173	3.5	3.0	3.2	2.9	9222	chr2L	18051857	intron	rdo +	chr2L	18056468	intron	rdo +	chr2L	18061079	intron	rdo +	chr2L_12_18055001	chr2L_18055001	SF428_1-HE
430	chr2L	18408012	18408024	chr2L	18412822	18412833	Doc	5	4810	9.5	0.0	4.8	0.9	4821	chr2L	18408012	intergenic	not near genes	chr2L	18410422	intergenic	not near genes	chr2L	18412833	intergenic	not near genes	chr2L_5_18410001	chr2L_18410001	SF428_1-HE
436	chr2L	19147345	19147388	chr2L	19154406	19154449	297	12	7060	5.5	5.0	5.2	1.9	7104	chr2L	19147345	intron	brat +	chr2L	19150897	intron	brat +	chr2L	19154449	intron	brat +	chr2L_12_19150001	chr2L_19150001	SF428_1-HE
440	chr2L	19345011	19345032	chr2L	19357246	19357267	blood	5	12235	5.5	7.0	6.2	0.7	12256	chr2L	19345011	intron	dnt -	chr2L	19351139	intron	dnt -	chr2L	19357267	intron	dnt -	chr2L_5_19350001	chr2L_19350001	SF428_1-HE
444	chr2L	19620074	19620127	chr2L	19621089	19621142	jockey	22	1015	5.0	5.0	5.0	3.7	1068	chr2L	19620074	intron	Lar +	chr2L	19620608	intron	Lar +	chr2L	19621142	intron	Lar +	chr2L_22_19620001	chr2L_19620001	SF428_1-HE
445	chr2L	19652549	19652576	chr2L	19674010	19674038	opus	7	21461	7.5	3.5	5.5	1.1	21489	chr2L	19652549	intron	Lar +	chr2L	19663294	intron	Lar +	chr2L	19674038	intron	Lar +	chr2L_7_19660001	chr2L_19660001	SF428_1-HE
446	chr2L	19703516	19703564	chr2L	19712678	19712726	roo	12	9161	5.0	6.0	5.5	1.8	9210	chr2L	19703516	intron	Lar +	chr2L	19708121	intron	Lar +	chr2L	19712726	intron	Lar +	chr2L_12_19705001	chr2L_19705001	SF428_1-HE
447	chr2L	19737360	19737372	chr2L	19740842	19740867	1360	4	3492	1.0	2.5	1.8	1.4	3507	chr2L	19737360	intergenic	Nf-YB +	chr2L	19739114	intergenic	not near genes	chr2L	19740867	intergenic	not near genes	chr2L_4_19735001	chr2L_19735001	SF428_1-HE
454	chr2L	20005852	20005887	chr2L	20010954	20010989	flea	8	5101	3.0	2.0	2.5	2.3	5137	chr2L	20005852	intron	CG43861 -	chr2L	20008420	intron	CG43861 -	chr2L	20010989	intron	CG43861 -	chr2L_8_20005001	chr2L_20005001	SF428_1-HE
457	chr2L	20272092	20272140	chr2L	20282829	20282877	copia	14	10737	3.0	6.0	4.5	2.5	10785	chr2L	20272092	intergenic	not near genes	chr2L	20277484	intergenic	not near genes	chr2L	20282877	intergenic	not near genes	chr2L_14_20275001	chr2L_20275001	SF428_1-HE
459	chr2L	20303145	20303177	chr2L	20310639	20310652	blood	8	7492	3.0	4.5	3.8	1.7	7507	chr2L	20303145	intergenic	not near genes	chr2L	20306898	intergenic	not near genes	chr2L	20310652	intergenic	not near genes	chr2L_8_20305001	chr2L_20305001	SF428_1-HE
462	chr2L	20372196	20372220	chr2L	20372472	20372496	pogo	7	275	1.5	5.0	3.2	1.7	300	chr2L	20372196	intergenic	Ugt37a1 -	chr2L	20372346	intergenic	Ugt37a1 -	chr2L	20372496	exon	Ugt37a1 -	chr2L_7_20370001	chr2L_20370001	SF428_1-HE
469	chr2L	20568637	20568647	chr2L	20569053	20569063	X-element	4	416	4.0	3.0	3.5	0.9	426	chr2L	20568637	intron	CR45347 +	chr2L	20568850	intron	CR45347 +	chr2L	20569063	intron	CR45347 +	chr2L_4_20565001	chr2L_20565001	SF428_1-HE
474	chr2L	20835796	20835829	chr2L	20836539	20836572	Quasimodo	5	743	2.5	2.5	2.5	1.4	776	chr2L	20835796	5` UTR	Oseg5 -	chr2L	20836184	intergenic	Oseg5 -,Spn38F -	chr2L	20836572	intergenic	Spn38F -	chr2L_5_20835001	chr2L_20835001	SF428_1-HE
477	chr2L	20891519	20891539	chr2L	20896646	20896662	jockey	4	5126	2.0	1.5	1.8	1.4	5143	chr2L	20891519	intron,intron	CG43739 -,sky -	chr2L	20894090	intron,intron	CG43739 -,sky -	chr2L	20896662	intron,intron	CG43739 -,sky -	chr2L_4_20890001	chr2L_20890001	SF428_1-HE
483	chr2L	21020251	21020306	chr2L	21023954	21024009	NOF	17	3702	4.5	3.0	3.8	3.5	3758	chr2L	21020251	intron	CG42238 -	chr2L	21022130	intron	CG42238 -	chr2L	21024009	intron	CG42238 -	chr2L_17_21020001	chr2L_21020001	SF428_1-HE
484	chr2L	21041119	21041165	chr2L	21049406	21049452	Tirant	17	8287	4.0	6.5	5.2	2.7	8333	chr2L	21041119	intron	CG42238 -	chr2L	21045286	intron	CG42238 -	chr2L	21049452	intron	CG42238 -	chr2L_17_21045001	chr2L_21045001	SF428_1-HE
488	chr2L	21347526	21347571	chr2L	21355024	21355069	blood	12	7498	2.0	3.0	2.5	3.4	7543	chr2L	21347526	intron	Tsp39D +	chr2L	21351298	intron	Tsp39D +	chr2L	21355069	intron	Tsp39D +	chr2L_12_21350001	chr2L_21350001	SF428_1-HE
491	chr2L	21597029	21597054	chr2L	21604799	21604824	roo	6	7770	3.5	10.0	6.8	0.8	7795	chr2L	21597029	intergenic	not near genes	chr2L	21600926	intergenic	not near genes	chr2L	21604824	intergenic	not near genes	chr2L_6_21600001	chr2L_21600001	SF428_1-HE
499	chr2L	21981661	21981706	chr2L	21990852	21990897	roo	14	9191	4.0	8.5	6.2	1.9	9236	chr2L	21981661	exon	CG2528 -	chr2L	21986279	intron	CG2528 -	chr2L	21990897	exon	CG2528 -	chr2L_14_21985001	chr2L_21985001	SF428_1-HE
505	chr2L	22258597	22258645	chr2L	22260747	22260795	G6	16	2150	2.5	7.5	5.0	2.7	2198	chr2L	22258597	intergenic	Tif-IA +	chr2L	22259696	intergenic	not near genes	chr2L	22260795	intergenic	not near genes	chr2L_16_22255001	chr2L_22255001	SF428_1-HE
506	chr2L	22581968	22581997	chr2L	22583783	22583812	S-element	4	1815	2.0	5.5	3.8	0.8	1844	chr2L	22581968	intron	CG17494 +	chr2L	22582890	intron	CG17494 +	chr2L	22583812	intron	CG17494 +	chr2L_4_22580001	chr2L_22580001	SF428_1-HE
508	chr2L	22776399	22776452	chr2L	22778214	22778267	S-element	8	1815	1.5	2.0	1.8	2.9	1868	chr2L	22776399	intergenic	not near genes	chr2L	22777333	intergenic	not near genes	chr2L	22778267	intergenic	not near genes	chr2L_8_22775001	chr2L_22775001	SF428_1-HE
510	chr2R	469943	469980	chr2R	473210	473247	F-element	4	3267	0.5	5.5	3.0	1.0	3304	chr2R	469943	intergenic	not near genes	chr2R	471595	intergenic	not near genes	chr2R	473247	intergenic	not near genes	chr2R_4_470001	chr2R_470001	SF428_1-HE
511	chr2R	529320	529357	chr2R	537963	538008	Max-element	8	8650	2.5	3.5	3.0	2.0	8688	chr2R	529320	intron	CG40378 +	chr2R	533664	intron	CG40378 +	chr2R	538008	intron	CG40378 +	chr2R_8_530001	chr2R_530001	SF428_1-HE
512	chr2R	2498960	2499009	chr2R	2508133	2508178	roo	11	9173	1.0	4.0	2.5	3.1	9218	chr2R	2498960	intron	MFS17 -	chr2R	2503569	intron	MFS17 -	chr2R	2508178	intron	MFS17 -	chr2R_11_2500001	chr2R_2500001	SF428_1-HE
513	chr2R	1373050	1373060	chr2R	2589322	2589332	Cr1a	5	1216272	10.5	7.5	9.0	0.5	1216282	chr2R	1373050	intron	l(2)41Ab +	chr2R	1981191	intron	CG17684 -	chr2R	2589332	intergenic	not near genes	chr2R_5_1980001	chr2R_1980001	SF428_1-HE
514	chr2R	3532598	3532623	chr2R	3536067	3536092	Doc	4	3469	0.5	3.0	1.8	1.4	3494	chr2R	3532598	intergenic	not near genes	chr2R	3534345	intergenic	not near genes	chr2R	3536092	intergenic	not near genes	chr2R_4_3530001	chr2R_3530001	SF428_1-HE
517	chr2R	4622944	4622979	chr2R	4624115	4624164	1360	10	1183	0.5	3.0	1.8	3.6	1220	chr2R	4622944	intergenic	CR44101 -	chr2R	4623554	intergenic	not near genes	chr2R	4624164	intergenic	not near genes	chr2R_10_4620001	chr2R_4620001	SF428_1-HE
520	chr2R	4750321	4750354	chr2R	4751504	4751537	1360	5	1181	2.5	1.0	1.8	1.8	1216	chr2R	4750321	intron	conu +	chr2R	4750929	intron	conu +	chr2R	4751537	intron	conu +	chr2R_5_4750001	chr2R_4750001	SF428_1-HE
529	chr2R	5417979	5418021	chr2R	5420629	5420679	Burdock	5	2656	4.5	1.0	2.8	1.3	2700	chr2R	5417979	intron	laccase2 +	chr2R	5419329	intron	laccase2 +	chr2R	5420679	intron	laccase2 +	chr2R_5_5415001	chr2R_5415001	SF428_1-HE
530	chr2R	5450080	5450095	chr2R	5451009	5451024	baggins	6	928	5.5	0.5	3.0	1.5	944	chr2R	5450080	intron	laccase2 +	chr2R	5450552	intron	laccase2 +	chr2R	5451024	intron	laccase2 +	chr2R_6_5450001	chr2R_5450001	SF428_1-HE
536	chr2R	5543200	5543221	chr2R	5547310	5547331	invader1	4	4110	0.0	5.0	2.5	1.1	4131	chr2R	5543200	intron	CG30438 +	chr2R	5545266	intron	CG30438 +	chr2R	5547331	intron	CG30438 +	chr2R_4_5545001	chr2R_5545001	SF428_1-HE
541	chr2R	5869248	5869289	chr2R	5874350	5874391	flea	12	5102	4.0	3.0	3.5	2.7	5143	chr2R	5869248	intergenic	not near genes	chr2R	5871820	intergenic	not near genes	chr2R	5874391	intergenic	not near genes	chr2R_12_5870001	chr2R_5870001	SF428_1-HE
543	chr2R	5902140	5902191	chr2R	5909724	5909776	17.6	9	7585	1.0	5.0	3.0	2.2	7636	chr2R	5902140	intron	CG43366 +	chr2R	5905958	intron	CG43366 +	chr2R	5909776	intron	CG43366 +	chr2R_9_5905001	chr2R_5905001	SF428_1-HE
546	chr2R	6096706	6096732	chr2R	6101930	6101950	BS	10	5223	7.5	6.0	6.8	1.3	5244	chr2R	6096706	intron	EcR -	chr2R	6099328	intron	EcR -	chr2R	6101950	intron	EcR -	chr2R_10_6095001	chr2R_6095001	SF428_1-HE
549	chr2R	6494518	6494550	chr2R	6499306	6499338	F-element	4	4788	3.0	1.0	2.0	1.3	4820	chr2R	6494518	intergenic	not near genes	chr2R	6496928	intergenic	not near genes	chr2R	6499338	intergenic	not near genes	chr2R_4_6495001	chr2R_6495001	SF428_1-HE
554	chr2R	6579756	6579797	chr2R	6584868	6584909	flea	10	5112	3.0	4.5	3.8	2.1	5153	chr2R	6579756	intron	jing +	chr2R	6582332	intron	jing +	chr2R	6584909	intron	jing +	chr2R_10_6580001	chr2R_6580001	SF428_1-HE
557	chr2R	6952152	6952182	chr2R	6959758	6959788	opus	4	7606	3.5	1.5	2.5	1.1	7636	chr2R	6952152	intron,intron,exon	mim -,CheB42c -,ppk25 +	chr2R	6955970	intron,intron	mim -,CheB42c -	chr2R	6959788	intron,intron	mim -,CheB42c -	chr2R_4_6955001	chr2R_6955001	SF428_1-HE
559	chr2R	7235813	7235846	chr2R	7240927	7240964	jockey	4	5117	0.5	1.5	1.0	2.0	5151	chr2R	7235813	intergenic	not near genes	chr2R	7238388	intergenic	not near genes	chr2R	7240964	intergenic	not near genes	chr2R_4_7235001	chr2R_7235001	SF428_1-HE
565	chr2R	7608397	7608430	chr2R	7613625	7613659	I-element	7	5229	3.0	4.0	3.5	1.6	5262	chr2R	7608397	intron	CG1358 -	chr2R	7611028	intron	CG1358 -	chr2R	7613659	intron	CG1358 -	chr2R_7_7610001	chr2R_7610001	SF428_1-HE
572	chr2R	7869171	7869209	chr2R	7873983	7874021	Doc	8	4812	4.0	4.0	4.0	1.6	4850	chr2R	7869171	intron	Dgk -	chr2R	7871596	intron	Dgk -	chr2R	7874021	intron	Dgk -	chr2R_8_7870001	chr2R_7870001	SF428_1-HE
580	chr2R	8330842	8330879	chr2R	8331354	8331362	roo	15	510	6.5	9.0	7.8	1.7	520	chr2R	8330842	intron	pdm3 +	chr2R	8331102	intron	pdm3 +	chr2R	8331362	intron	pdm3 +	chr2R_15_8330001	chr2R_8330001	SF428_1-HE
582	chr2R	8398194	8398227	chr2R	8403001	8403034	Doc	5	4805	2.0	1.5	1.8	1.8	4840	chr2R	8398194	intron	CG2121 -	chr2R	8400614	intron	CG2121 -	chr2R	8403034	intron	CG2121 -	chr2R_5_8400001	chr2R_8400001	SF428_1-HE
590	chr2R	8722742	8722781	chr2R	8723009	8723048	pogo	6	267	3.5	3.0	3.2	1.4	306	chr2R	8722742	intron	CG14767 -	chr2R	8722895	intron	CG14767 -	chr2R	8723048	intron	CG14767 -	chr2R_6_8720001	chr2R_8720001	SF428_1-HE
595	chr2R	9151277	9151315	chr2R	9157773	9157811	Burdock	5	6496	3.5	2.0	2.8	1.3	6534	chr2R	9151277	exon	CG30345 +	chr2R	9154544	intergenic	not near genes	chr2R	9157811	intergenic	CG8008 -	chr2R_5_9150001	chr2R_9150001	SF428_1-HE
596	chr2R	9212675	9212706	chr2R	9213187	9213213	roo	6	511	2.5	3.0	2.8	1.6	538	chr2R	9212675	intergenic	CR45309 +	chr2R	9212944	intergenic	CR45309 +	chr2R	9213213	5` UTR	CR45309 +	chr2R_6_9210001	chr2R_9210001	SF428_1-HE
602	chr2R	9480075	9480099	chr2R	9490628	9490652	roo	8	10553	2.5	3.0	2.8	2.1	10577	chr2R	9480075	intergenic	not near genes	chr2R	9485364	intergenic	not near genes	chr2R	9490652	intergenic	not near genes	chr2R_8_9485001	chr2R_9485001	SF428_1-HE
605	chr2R	9871030	9871069	chr2R	9871542	9871581	roo	9	511	0.0	3.0	1.5	3.6	551	chr2R	9871030	intron	cbx -	chr2R	9871306	intron	cbx -	chr2R	9871581	intron,5` UTR	cbx -,CG18446 +	chr2R_9_9870001	chr2R_9870001	SF428_1-HE
606	chr2R	9945421	9945459	chr2R	9945643	9945681	BS	6	222	4.0	3.0	3.5	1.3	260	chr2R	9945421	intron	Mef2 -	chr2R	9945551	intron	Mef2 -	chr2R	9945681	intron	Mef2 -	chr2R_6_9945001	chr2R_9945001	SF428_1-HE
608	chr2R	10005823	10005879	chr2R	10007014	10007054	1360	13	1188	1.0	2.0	1.5	5.2	1231	chr2R	10005823	intron	Pka-R2 -	chr2R	10006438	intron	Pka-R2 -	chr2R	10007054	intron	Pka-R2 -	chr2R_13_10005001	chr2R_10005001	SF428_1-HE
610	chr2R	10176892	10176900	chr2R	10186085	10186093	roo	4	9193	4.5	7.5	6.0	0.6	9201	chr2R	10176892	intron	KCNQ -	chr2R	10181492	intron	KCNQ -	chr2R	10186093	intron	KCNQ -	chr2R_4_10180001	chr2R_10180001	SF428_1-HE
626	chr2R	10585577	10585586	chr2R	10594186	10594195	Tirant	4	8609	3.0	12.5	7.8	0.5	8618	chr2R	10585577	intron	psq +	chr2R	10589886	intron	psq +	chr2R	10594195	intron	psq +	chr2R_4_10585001	chr2R_10585001	SF428_1-HE
627	chr2R	10659027	10659050	chr2R	10666668	10666690	mdg1	7	7640	0.0	4.5	2.2	2.2	7663	chr2R	10659027	intergenic	not near genes	chr2R	10662858	intergenic	not near genes	chr2R	10666690	intergenic	not near genes	chr2R_7_10660001	chr2R_10660001	SF428_1-HE
632	chr2R	10948022	10948059	chr2R	10955599	10955636	17.6	12	7577	0.0	2.0	1.0	6.0	7614	chr2R	10948022	intergenic	not near genes	chr2R	10951829	intergenic	not near genes	chr2R	10955636	intergenic	not near genes	chr2R_12_10950001	chr2R_10950001	SF428_1-HE
637	chr2R	11009793	11009844	chr2R	11018990	11019044	roo	13	9197	1.5	1.5	1.5	5.2	9251	chr2R	11009793	intron	luna -	chr2R	11014418	intron	luna -	chr2R	11019044	intron	luna -	chr2R_13_11010001	chr2R_11010001	SF428_1-HE
640	chr2R	11207796	11207845	chr2R	11208015	11208064	BS	12	219	6.5	5.5	6.0	1.7	268	chr2R	11207796	intron	shn +	chr2R	11207930	intron	shn +	chr2R	11208064	intron	shn +	chr2R_12_11205001	chr2R_11205001	SF428_1-HE
645	chr2R	11415513	11415551	chr2R	11418683	11418726	opus	8	3174	2.0	5.0	3.5	1.8	3213	chr2R	11415513	intron	Drip -	chr2R	11417120	intron	Drip -	chr2R	11418726	intron	Drip -	chr2R_8_11415001	chr2R_11415001	SF428_1-HE
647	chr2R	11472633	11472677	chr2R	11473856	11473899	pogo	7	1223	0.0	3.5	1.8	2.5	1266	chr2R	11472633	intergenic	not near genes	chr2R	11473266	intergenic	not near genes	chr2R	11473899	intergenic	not near genes	chr2R_7_11470001	chr2R_11470001	SF428_1-HE
659	chr2R	12481145	12481150	chr2R	12482975	12482980	roo	4	1830	5.0	4.0	4.5	0.7	1835	chr2R	12481145	exon	Dh44-R2 +	chr2R	12482062	intron	Dh44-R2 +	chr2R	12482980	intron	Dh44-R2 +	chr2R_4_12480001	chr2R_12480001	SF428_1-HE
664	chr2R	12789274	12789323	chr2R	12797663	12797712	roo	7	8386	2.5	6.0	4.2	1.3	8438	chr2R	12789274	intron,3` UTR	sca +,CR45137 -	chr2R	12793493	intron,intron	sca +,CR45137 -	chr2R	12797712	intron,3` UTR	sca +,CR45137 -	chr2R_7_12790001	chr2R_12790001	SF428_1-HE
669	chr2R	13136815	13136864	chr2R	13141639	13141688	Doc	8	4824	1.5	1.5	1.5	3.2	4873	chr2R	13136815	exon	Cap-G +	chr2R	13139252	intron	Cap-G +	chr2R	13141688	intron	Cap-G +	chr2R_8_13135001	chr2R_13135001	SF428_1-HE
677	chr2R	13580488	13580525	chr2R	13580864	13580901	jockey	4	376	0.0	0.0	0.0	4.0	413	chr2R	13580488	3` UTR	CG6191 -	chr2R	13580694	3` UTR,3` UTR	CG6191 -,CG45088 -	chr2R	13580901	3` UTR,3` UTR	CG6191 -,CG45088 -	chr2R_4_13580001	chr2R_13580001	SF428_1-HE
683	chr2R	13728103	13728140	chr2R	13735789	13735826	opus	7	7685	4.0	4.5	4.2	1.3	7723	chr2R	13728103	intron	fas +	chr2R	13731964	intron	fas +	chr2R	13735826	intron	fas +	chr2R_7_13730001	chr2R_13730001	SF428_1-HE
687	chr2R	13905588	13905628	chr2R	13907596	13907636	Rt1a	8	2008	4.0	5.5	4.8	1.4	2048	chr2R	13905588	intron	shot -	chr2R	13906612	intron	shot -	chr2R	13907636	intron	shot -	chr2R_8_13905001	chr2R_13905001	SF428_1-HE
696	chr2R	14467269	14467311	chr2R	14476446	14476449	roo	7	9172	0.5	3.5	2.0	2.3	9180	chr2R	14467269	intergenic	not near genes	chr2R	14471859	intergenic	not near genes	chr2R	14476449	5` UTR	CR44462 +	chr2R_7_14470001	chr2R_14470001	SF428_1-HE
697	chr2R	14497381	14497408	chr2R	14498573	14498600	1360	7	1191	5.0	3.5	4.2	1.3	1219	chr2R	14497381	3` UTR	Cpsf160 -	chr2R	14497990	intron	Cpsf160 -	chr2R	14498600	3` UTR	Cpsf160 -	chr2R_7_14495001	chr2R_14495001	SF428_1-HE
710	chr2R	15015434	15015486	chr2R	15022882	15022933	mdg1	14	7448	0.5	4.0	2.2	4.4	7499	chr2R	15015434	intron	hbs +	chr2R	15019184	intron	hbs +	chr2R	15022933	intron	hbs +	chr2R_14_15015001	chr2R_15015001	SF428_1-HE
712	chr2R	15084952	15085005	chr2R	15092026	15092080	297	15	7075	3.0	3.0	3.0	3.8	7128	chr2R	15084952	intergenic	not near genes	chr2R	15088516	intergenic	not near genes	chr2R	15092080	5` UTR	CR44457 +	chr2R_15_15085001	chr2R_15085001	SF428_1-HE
715	chr2R	15119290	15119349	chr2R	15127797	15127856	Tirant	18	8505	5.5	2.0	3.8	3.8	8566	chr2R	15119290	intron	chn +	chr2R	15123573	intron	chn +	chr2R	15127856	intron	chn +	chr2R_18_15120001	chr2R_15120001	SF428_1-HE
757	chr2R	17236488	17236532	chr2R	17241715	17241762	copia	4	5224	3.5	5.0	4.2	0.8	5274	chr2R	17236488	intron	mbl +	chr2R	17239125	intron	mbl +	chr2R	17241762	intron	mbl +	chr2R_4_17235001	chr2R_17235001	SF428_1-HE
759	chr2R	17485903	17485952	chr2R	17490691	17490750	F-element	4	4796	2.0	0.0	1.0	2.0	4847	chr2R	17485903	5` UTR,intron	CG43110 -,NT5E-2 +	chr2R	17488326	intron	NT5E-2 +	chr2R	17490750	intron	NT5E-2 +	chr2R_4_17485001	chr2R_17485001	SF428_1-HE
764	chr2R	17784002	17784048	chr2R	17784267	17784315	pogo	6	265	3.0	5.5	4.2	1.2	313	chr2R	17784002	intergenic	mir-31a -	chr2R	17784158	intergenic	mir-31a -	chr2R	17784315	intergenic	mir-31a -	chr2R_6_17780001	chr2R_17780001	SF428_1-HE
771	chr2R	18045658	18045687	chr2R	18046036	18046064	jockey	6	378	3.0	2.0	2.5	1.7	406	chr2R	18045658	intergenic	not near genes	chr2R	18045861	intergenic	not near genes	chr2R	18046064	intergenic	CG5767 -	chr2R_6_18045001	chr2R_18045001	SF428_1-HE
776	chr2R	18358381	18358394	chr2R	18372614	18372632	roo	6	14237	9.0	0.0	4.5	1.1	14251	chr2R	18358381	intergenic	not near genes	chr2R	18365506	intergenic	not near genes	chr2R	18372632	intergenic	not near genes	chr2R_6_18365001	chr2R_18365001	SF428_1-HE
780	chr2R	18487812	18487852	chr2R	18495289	18495348	blood	5	7484	2.5	0.5	1.5	2.0	7536	chr2R	18487812	intron	CG30116 -	chr2R	18491580	intron	CG30116 -	chr2R	18495348	intron	CG30116 -	chr2R_5_18490001	chr2R_18490001	SF428_1-HE
784	chr2R	18590857	18590878	chr2R	18600018	18600056	roo	4	9174	0.0	0.5	0.2	3.3	9199	chr2R	18590857	intron	GEFmeso -	chr2R	18595456	intron	GEFmeso -	chr2R	18600056	intron	GEFmeso -	chr2R_4_18595001	chr2R_18595001	SF428_1-HE
805	chr2R	19776586	19776620	chr2R	19779935	19779965	jockey	5	3344	1.0	2.5	1.8	1.8	3379	chr2R	19776586	intergenic	not near genes	chr2R	19778276	intergenic	not near genes	chr2R	19779965	intergenic	not near genes	chr2R_5_19775001	chr2R_19775001	SF428_1-HE
807	chr2R	19957409	19957454	chr2R	19962637	19962682	copia	10	5227	4.5	2.5	3.5	2.2	5273	chr2R	19957409	intergenic	CG44623 +	chr2R	19960046	intergenic	not near genes	chr2R	19962682	intergenic	not near genes	chr2R_10_19960001	chr2R_19960001	SF428_1-HE
824	chr2R	20739419	20739464	chr2R	20744213	20744258	F-element	7	4794	3.0	5.0	4.0	1.4	4839	chr2R	20739419	intron	dpr +	chr2R	20741838	intron	dpr +	chr2R	20744258	intron	dpr +	chr2R_7_20740001	chr2R_20740001	SF428_1-HE
825	chr2R	20783297	20783322	chr2R	20788095	20788108	F-element	7	4795	3.5	4.0	3.8	1.5	4811	chr2R	20783297	intergenic	not near genes	chr2R	20785702	intergenic	not near genes	chr2R	20788108	intergenic	CG43666 -	chr2R_7_20785001	chr2R_20785001	SF428_1-HE
841	chr2R	21753059	21753117	chr2R	21753570	21753621	roo	15	511	1.5	2.5	2.0	5.0	562	chr2R	21753059	intergenic	not near genes	chr2R	21753340	intergenic	not near genes	chr2R	21753621	intergenic	not near genes	chr2R_15_21750001	chr2R_21750001	SF428_1-HE
846	chr2R	21809511	21809553	chr2R	21817777	21817819	roo	5	8266	4.0	2.0	3.0	1.2	8308	chr2R	21809511	intergenic	not near genes	chr2R	21813665	intergenic	not near genes	chr2R	21817819	intergenic	not near genes	chr2R_5_21810001	chr2R_21810001	SF428_1-HE
861	chr2R	22349674	22349710	chr2R	22351484	22351520	jockey	8	1810	3.0	5.0	4.0	1.6	1846	chr2R	22349674	intron	Liprin-gamma -	chr2R	22350597	intron	Liprin-gamma -	chr2R	22351520	intron	Liprin-gamma -	chr2R_8_22350001	chr2R_22350001	SF428_1-HE
866	chr2R	22465297	22465331	chr2R	22465522	22465548	BS	5	223	6.5	0.0	3.2	1.2	251	chr2R	22465297	intron	CG10384 +	chr2R	22465422	intron	CG10384 +	chr2R	22465548	intron	CG10384 +	chr2R_5_22465001	chr2R_22465001	SF428_1-HE
867	chr2R	22525745	22525773	chr2R	22529303	22529352	jockey	5	3576	5.0	3.5	4.2	1.0	3607	chr2R	22525745	intron	px -	chr2R	22527548	intron	px -	chr2R	22529352	intron	px -	chr2R_5_22525001	chr2R_22525001	SF428_1-HE
869	chr2R	22580425	22580445	chr2R	22586601	22586621	diver	6	6176	0.5	0.0	0.2	5.0	6196	chr2R	22580425	intron	dnr1 -	chr2R	22583523	intron	dnr1 -	chr2R	22586621	intron	dnr1 -	chr2R_6_22580001	chr2R_22580001	SF428_1-HE
873	chr2R	22774947	22774984	chr2R	22775392	22775429	jockey	11	445	6.0	4.0	5.0	1.8	482	chr2R	22774947	intron	CG42260 -	chr2R	22775188	intron	CG42260 -	chr2R	22775429	intron	CG42260 -	chr2R_11_22775001	chr2R_22775001	SF428_1-HE
895	chr2R	24147051	24147068	chr2R	24154655	24154671	412	4	7603	2.5	2.0	2.2	1.2	7620	chr2R	24147051	intron	Dat +	chr2R	24150861	intron	Dat +	chr2R	24154671	intron	Dat +	chr2R_4_24150001	chr2R_24150001	SF428_1-HE
896	chr2R	24177210	24177266	chr2R	24184721	24184777	412	5	7511	0.5	0.0	0.2	4.2	7567	chr2R	24177210	3` UTR	Nop60B +	chr2R	24180994	intron	Nop60B +	chr2R	24184777	3` UTR	Nop60B +	chr2R_5_24180001	chr2R_24180001	SF428_1-HE
905	chr2R	24727861	24727908	chr2R	24735394	24735442	mdg1	5	7534	3.0	2.5	2.8	1.3	7581	chr2R	24727861	intron	Mid1 -	chr2R	24731652	intron	Mid1 -	chr2R	24735442	intron	Mid1 -	chr2R_5_24730001	chr2R_24730001	SF428_1-HE
906	chr2R	24763618	24763637	chr2R	24765620	24765639	G2	4	2002	0.5	2.5	1.5	1.6	2021	chr2R	24763618	exon	CG3894 +	chr2R	24764628	intron	CG3894 +	chr2R	24765639	exon	CG3894 +	chr2R_4_24760001	chr2R_24760001	SF428_1-HE
911	chr2R	25141635	25141678	chr2R	25159351	25159394	roo	6	17716	1.0	1.5	1.2	2.7	17759	chr2R	25141635	intergenic	not near genes	chr2R	25150514	intergenic	not near genes	chr2R	25159394	intergenic	not near genes	chr2R_6_25150001	chr2R_25150001	SF428_1-HE
918	chr3L	110185	110237	chr3L	119378	119430	roo	11	9189	3.0	1.5	2.2	3.4	9245	chr3L	110185	intergenic	not near genes	chr3L	114808	intergenic	not near genes	chr3L	119430	intergenic	not near genes	chr3L_11_110001	chr3L_110001	SF428_1-HE
920	chr3L	402665	402717	chr3L	409744	409796	297	18	7078	7.0	7.5	7.2	2.2	7131	chr3L	402665	intergenic	not near genes	chr3L	406230	intergenic	not near genes	chr3L	409796	intergenic	not near genes	chr3L_18_405001	chr3L_405001	SF428_1-HE
928	chr3L	789889	789946	chr3L	790400	790456	roo	8	508	4.0	2.0	3.0	2.0	567	chr3L	789889	intergenic	not near genes	chr3L	790172	intergenic	not near genes	chr3L	790456	intergenic	not near genes	chr3L_8_790001	chr3L_790001	SF428_1-HE
929	chr3L	857978	858009	chr3L	866485	866516	Tirant	7	8507	5.5	5.0	5.2	1.1	8538	chr3L	857978	intergenic	not near genes	chr3L	862247	intergenic	not near genes	chr3L	866516	5` UTR	CG12502 +	chr3L_7_860001	chr3L_860001	SF428_1-HE
931	chr3L	925167	925185	chr3L	932619	932637	mdg1	6	7452	2.0	3.0	2.5	1.7	7470	chr3L	925167	intron	Glut1 +	chr3L	928902	intron	Glut1 +	chr3L	932637	intron	Glut1 +	chr3L_6_925001	chr3L_925001	SF428_1-HE
933	chr3L	939751	939794	chr3L	940898	940941	jockey	12	1147	3.0	7.0	5.0	2.0	1190	chr3L	939751	intron	Glut1 +	chr3L	940346	intron	Glut1 +	chr3L	940941	intron	Glut1 +	chr3L_12_940001	chr3L_940001	SF428_1-HE
937	chr3L	1047332	1047380	chr3L	1055169	1055218	412	5	7837	2.5	0.0	1.2	2.3	7886	chr3L	1047332	intron	bab1 -	chr3L	1051275	intron	bab1 -	chr3L	1055218	intron	bab1 -	chr3L_5_1050001	chr3L_1050001	SF428_1-HE
942	chr3L	1154103	1154151	chr3L	1163279	1163327	roo	8	9176	4.0	2.0	3.0	2.0	9224	chr3L	1154103	intron	bab2 -	chr3L	1158715	intron	bab2 -	chr3L	1163327	intron	bab2 -	chr3L_8_1155001	chr3L_1155001	SF428_1-HE
944	chr3L	1219569	1219621	chr3L	1227328	1227379	412	5	7759	2.5	1.5	2.0	1.7	7810	chr3L	1219569	intron	mwh +	chr3L	1223474	intron	mwh +	chr3L	1227379	intron	mwh +	chr3L_5_1220001	chr3L_1220001	SF428_1-HE
957	chr3L	1485722	1485733	chr3L	1486919	1486929	1360	5	1197	2.5	2.5	2.5	1.4	1207	chr3L	1485722	intron	stet -	chr3L	1486326	intron	stet -	chr3L	1486929	intron	stet -	chr3L_5_1485001	chr3L_1485001	SF428_1-HE
958	chr3L	1505996	1506027	chr3L	1513619	1513640	17.6	8	7622	3.0	5.0	4.0	1.6	7644	chr3L	1505996	intron,intron	Psa +,cue -	chr3L	1509818	intron,intron	Psa +,cue -	chr3L	1513640	intron,intron	Psa +,cue -	chr3L_8_1505001	chr3L_1505001	SF428_1-HE
983	chr3L	2927814	2927854	chr3L	2936117	2936156	Tirant	15	8302	5.0	4.5	4.8	2.6	8342	chr3L	2927814	intron	Shab +	chr3L	2931985	intron	Shab +	chr3L	2936156	intron	Shab +	chr3L_15_2930001	chr3L_2930001	SF428_1-HE
986	chr3L	3061262	3061306	chr3L	3069871	3069915	Tirant	12	8608	8.0	6.5	7.2	1.5	8653	chr3L	3061262	intron	CG32486 -	chr3L	3065588	intron	CG32486 -	chr3L	3069915	intron	CG32486 -	chr3L_12_3065001	chr3L_3065001	SF428_1-HE
990	chr3L	3281423	3281472	chr3L	3281945	3281993	Doc	9	515	0.5	2.0	1.2	4.1	570	chr3L	3281423	intron	CG12017 +	chr3L	3281708	intron	CG12017 +	chr3L	3281993	intron	CG12017 +	chr3L_9_3280001	chr3L_3280001	SF428_1-HE
998	chr3L	3475050	3475094	chr3L	3475519	3475564	jockey	5	469	5.5	1.0	3.2	1.2	514	chr3L	3475050	intron	CG42324 +	chr3L	3475307	intron	CG42324 +	chr3L	3475564	intron	CG42324 +	chr3L_5_3475001	chr3L_3475001	SF428_1-HE
1003	chr3L	3601278	3601316	chr3L	3606615	3606653	copia	6	5336	3.0	2.5	2.8	1.6	5375	chr3L	3601278	intron	Eip63E +	chr3L	3603966	intron	Eip63E +	chr3L	3606653	intron	Eip63E +	chr3L_6_3600001	chr3L_3600001	SF428_1-HE
1011	chr3L	3833721	3833765	chr3L	3833987	3834032	pogo	12	267	2.5	3.0	2.8	3.2	311	chr3L	3833721	intron	enc +	chr3L	3833876	intron	enc +	chr3L	3834032	intron	enc +	chr3L_12_3830001	chr3L_3830001	SF428_1-HE
1015	chr3L	4328734	4328740	chr3L	4336257	4336263	412	4	7523	5.5	5.0	5.2	0.6	7529	chr3L	4328734	intron	Cip4 -	chr3L	4332498	intron	Cip4 -	chr3L	4336263	intron	Cip4 -	chr3L_4_4330001	chr3L_4330001	SF428_1-HE
1026	chr3L	4901117	4901155	chr3L	4907333	4907371	diver	6	6211	0.5	2.0	1.2	2.7	6254	chr3L	4901117	intergenic	CG13704 +	chr3L	4904244	intergenic	not near genes	chr3L	4907371	intergenic	not near genes	chr3L_6_4900001	chr3L_4900001	SF428_1-HE
1028	chr3L	5045434	5045468	chr3L	5050241	5050275	Doc	6	4807	3.0	3.5	3.2	1.4	4841	chr3L	5045434	intron	Con -	chr3L	5047854	intron	Con -	chr3L	5050275	intron	Con -	chr3L_6_5045001	chr3L_5045001	SF428_1-HE
1049	chr3L	5926299	5926318	chr3L	5926515	5926534	BS	4	213	3.5	0.5	2.0	1.3	235	chr3L	5926299	intron	Vap-33B +	chr3L	5926416	intron	Vap-33B +	chr3L	5926534	intron	Vap-33B +	chr3L_4_5925001	chr3L_5925001	SF428_1-HE
1051	chr3L	6001659	6001673	chr3L	6004385	6004399	jockey	4	2726	8.5	1.5	5.0	0.7	2740	chr3L	6001659	intron	PVRAP +	chr3L	6003029	intron	PVRAP +	chr3L	6004399	intron	PVRAP +	chr3L_4_6000001	chr3L_6000001	SF428_1-HE
1052	chr3L	6040351	6040381	chr3L	6042721	6042763	Doc	4	2379	0.5	1.0	0.8	2.2	2412	chr3L	6040351	intergenic	Jon65Aiv +	chr3L	6041557	intergenic	not near genes	chr3L	6042763	intergenic	not near genes	chr3L_4_6040001	chr3L_6040001	SF428_1-HE
1055	chr3L	6220889	6220944	chr3L	6230067	6230122	roo	8	9174	1.0	0.0	0.5	5.3	9233	chr3L	6220889	5` UTR	pncr008:3L +	chr3L	6225506	intergenic	not near genes	chr3L	6230122	intergenic	not near genes	chr3L_8_6225001	chr3L_6225001	SF428_1-HE
1056	chr3L	6334992	6335039	chr3L	6335489	6335536	297	11	494	4.0	4.5	4.2	2.1	544	chr3L	6334992	intron	CG13300 -	chr3L	6335264	intron	CG13300 -	chr3L	6335536	intron	CG13300 -	chr3L_11_6335001	chr3L_6335001	SF428_1-HE
1058	chr3L	6405641	6405680	chr3L	6432131	6432169	roo	6	26490	2.5	5.0	3.8	1.2	26528	chr3L	6405641	intron	CG42747 +	chr3L	6418905	intron	CG42747 +	chr3L	6432169	intron	CG42747 +	chr3L_6_6415001	chr3L_6415001	SF428_1-HE
1063	chr3L	6620595	6620602	chr3L	6621053	6621068	Rt1c	7	465	1.5	10.0	5.8	1.0	473	chr3L	6620595	intergenic	not near genes	chr3L	6620832	intergenic	not near genes	chr3L	6621068	intergenic	not near genes	chr3L_7_6620001	chr3L_6620001	SF428_1-HE
1066	chr3L	6781102	6781138	chr3L	6783141	6783174	Doc	5	2038	3.5	3.0	3.2	1.2	2072	chr3L	6781102	intergenic	not near genes	chr3L	6782138	intergenic	not near genes	chr3L	6783174	intergenic	not near genes	chr3L_5_6780001	chr3L_6780001	SF428_1-HE
1068	chr3L	6855878	6855936	chr3L	6860718	6860745	Doc	5	4815	2.0	5.5	3.8	1.0	4867	chr3L	6855878	intergenic	not near genes	chr3L	6858312	intergenic	not near genes	chr3L	6860745	intergenic	not near genes	chr3L_5_6855001	chr3L_6855001	SF428_1-HE
1070	chr3L	6887506	6887537	chr3L	6895024	6895055	roo	7	7518	1.5	0.0	0.8	3.9	7549	chr3L	6887506	intergenic	not near genes	chr3L	6891280	intergenic	not near genes	chr3L	6895055	intergenic	not near genes	chr3L_7_6890001	chr3L_6890001	SF428_1-HE
1084	chr3L	7498748	7498778	chr3L	7503551	7503579	F-element	6	4802	3.5	1.5	2.5	1.7	4831	chr3L	7498748	5` UTR	CG8539 -	chr3L	7501164	intergenic	not near genes	chr3L	7503579	intergenic	not near genes	chr3L_6_7500001	chr3L_7500001	SF428_1-HE
1091	chr3L	7793691	7793730	chr3L	7800769	7800808	297	11	7078	6.5	5.0	5.8	1.6	7117	chr3L	7793691	intron	CG32369 -	chr3L	7797250	intron	CG32369 -	chr3L	7800808	intron	CG32369 -	chr3L_11_7795001	chr3L_7795001	SF428_1-HE
1094	chr3L	7886492	7886541	chr3L	7889036	7889085	Stalker4	10	2544	3.5	1.5	2.5	2.9	2593	chr3L	7886492	intron	CG32365 +	chr3L	7887788	intron	CG32365 +	chr3L	7889085	intron	CG32365 +	chr3L_10_7885001	chr3L_7885001	SF428_1-HE
1095	chr3L	7916847	7916859	chr3L	7926044	7926056	roo	4	9197	2.0	5.0	3.5	0.9	9209	chr3L	7916847	3` UTR	syd -	chr3L	7921452	intron	syd -	chr3L	7926056	3` UTR	syd -	chr3L_4_7920001	chr3L_7920001	SF428_1-HE
1099	chr3L	7985349	7985356	chr3L	7987697	7987710	NOF	4	2352	5.0	4.0	4.5	0.7	2361	chr3L	7985349	intron	nmo +	chr3L	7986530	intron	nmo +	chr3L	7987710	intron	nmo +	chr3L_4_7985001	chr3L_7985001	SF428_1-HE
1120	chr3L	8791262	8791294	chr3L	8796708	8796740	I-element	11	5446	3.0	0.5	1.8	3.9	5478	chr3L	8791262	exon	Fhos +	chr3L	8794001	intron	Fhos +	chr3L	8796740	intron	Fhos +	chr3L_11_8790001	chr3L_8790001	SF428_1-HE
1124	chr3L	9076910	9076952	chr3L	9084496	9084538	412	11	7586	4.0	5.5	4.8	1.9	7628	chr3L	9076910	exon	Tequila +	chr3L	9080724	intron	Tequila +	chr3L	9084538	exon	Tequila +	chr3L_11_9080001	chr3L_9080001	SF428_1-HE
1127	chr3L	9130538	9130582	chr3L	9134325	9134369	412	9	3787	7.0	9.0	8.0	1.0	3831	chr3L	9130538	intergenic	bol -	chr3L	9132454	intergenic	not near genes	chr3L	9134369	intergenic	Dhpr +	chr3L_9_9130001	chr3L_9130001	SF428_1-HE
1129	chr3L	9164676	9164707	chr3L	9166169	9166200	hobo	14	1493	11.0	0.0	5.5	2.2	1524	chr3L	9164676	intron	Rdl -	chr3L	9165438	intron	Rdl -	chr3L	9166200	intron	Rdl -	chr3L_14_9165001	chr3L_9165001	SF428_1-HE
1133	chr3L	9219227	9219268	chr3L	9219925	9219945	jockey	8	695	4.5	5.5	5.0	1.3	718	chr3L	9219227	intergenic	not near genes	chr3L	9219586	intergenic	not near genes	chr3L	9219945	intergenic	not near genes	chr3L_8_9215001	chr3L_9215001	SF428_1-HE
1140	chr3L	9501678	9501726	chr3L	9502190	9502238	roo	9	512	1.0	2.0	1.5	3.6	560	chr3L	9501678	intron	path -	chr3L	9501958	intron	path -	chr3L	9502238	intron	path -	chr3L_9_9500001	chr3L_9500001	SF428_1-HE
1141	chr3L	9533746	9533756	chr3L	9541331	9541339	412	5	7585	4.5	7.5	6.0	0.7	7593	chr3L	9533746	intergenic	not near genes	chr3L	9537542	intergenic	not near genes	chr3L	9541339	intergenic	not near genes	chr3L_5_9535001	chr3L_9535001	SF428_1-HE
1142	chr3L	9533759	9533786	chr3L	9541325	9541372	412	13	7580	3.5	7.5	5.5	2.0	7613	chr3L	9533759	intergenic	not near genes	chr3L	9537566	intergenic	not near genes	chr3L	9541372	intergenic	not near genes	chr3L_13_9535001	chr3L_9535001	SF428_1-HE
1143	chr3L	9571895	9571932	chr3L	9572269	9572306	jockey	9	374	1.5	5.0	3.2	2.1	411	chr3L	9571895	intron	CG42673 +	chr3L	9572100	intron	CG42673 +	chr3L	9572306	intron	CG42673 +	chr3L_9_9570001	chr3L_9570001	SF428_1-HE
1144	chr3L	9575890	9575911	chr3L	9580990	9581015	jockey	6	5103	6.0	4.0	5.0	1.0	5125	chr3L	9575890	intron	CG42673 +	chr3L	9578452	intron	CG42673 +	chr3L	9581015	intron	CG42673 +	chr3L_6_9575001	chr3L_9575001	SF428_1-HE
1148	chr3L	9929647	9929689	chr3L	9938447	9938494	roo	7	8799	6.0	4.5	5.2	1.1	8847	chr3L	9929647	intron	CG34356 +	chr3L	9934070	intron	CG34356 +	chr3L	9938494	intron	CG34356 +	chr3L_7_9930001	chr3L_9930001	SF428_1-HE
1167	chr3L	10414940	10414972	chr3L	10417338	10417370	Doc	6	2395	4.5	2.5	3.5	1.3	2430	chr3L	10414940	intergenic	CG12362 +	chr3L	10416155	intergenic	not near genes	chr3L	10417370	intergenic	not near genes	chr3L_6_10415001	chr3L_10415001	SF428_1-HE
1189	chr3L	11103216	11103262	chr3L	11108556	11108601	X-element	5	5340	4.0	3.0	3.5	1.1	5385	chr3L	11103216	intergenic	Elo68alpha -,CG32071 -	chr3L	11105908	intergenic	not near genes	chr3L	11108601	exon	CG12522 +	chr3L_5_11105001	chr3L_11105001	SF428_1-HE
1197	chr3L	11264473	11264489	chr3L	11271451	11271467	17.6	5	6978	3.0	4.5	3.8	1.0	6994	chr3L	11264473	intergenic	not near genes	chr3L	11267970	intergenic	not near genes	chr3L	11271467	intergenic	not near genes	chr3L_5_11265001	chr3L_11265001	SF428_1-HE
1200	chr3L	11329674	11329726	chr3L	11332905	11332953	jockey	6	3224	2.5	1.0	1.8	2.1	3279	chr3L	11329674	intergenic	not near genes	chr3L	11331314	intergenic	not near genes	chr3L	11332953	intergenic	not near genes	chr3L_6_11330001	chr3L_11330001	SF428_1-HE
1209	chr3L	11723064	11723110	chr3L	11727885	11727931	Doc	6	4821	2.0	2.5	2.2	1.9	4867	chr3L	11723064	3` UTR	Bmcp +	chr3L	11725498	intron	Bmcp +	chr3L	11727931	3` UTR	Bmcp +	chr3L_6_11725001	chr3L_11725001	SF428_1-HE
1217	chr3L	11864528	11864585	chr3L	11865849	11865906	pogo	12	1321	2.0	3.5	2.8	3.2	1378	chr3L	11864528	intron	CG44837 -	chr3L	11865217	intron	CG44837 -	chr3L	11865906	intron	CG44837 -	chr3L_12_11865001	chr3L_11865001	SF428_1-HE
1236	chr3L	12874907	12874947	chr3L	12877218	12877265	jockey	8	2317	2.0	2.5	2.2	2.5	2358	chr3L	12874907	intergenic	not near genes	chr3L	12876086	intergenic	not near genes	chr3L	12877265	intergenic	not near genes	chr3L_8_12875001	chr3L_12875001	SF428_1-HE
1237	chr3L	12919254	12919279	chr3L	12924753	12924778	Rt1c	5	5497	6.0	0.0	3.0	1.2	5524	chr3L	12919254	intergenic	not near genes	chr3L	12922016	intergenic	not near genes	chr3L	12924778	intergenic	not near genes	chr3L_5_12920001	chr3L_12920001	SF428_1-HE
1248	chr3L	13525131	13525188	chr3L	13532953	13532983	roo	8	7818	5.5	5.0	5.2	1.3	7852	chr3L	13525131	intergenic	not near genes	chr3L	13529057	intergenic	not near genes	chr3L	13532983	intergenic	not near genes	chr3L_8_13525001	chr3L_13525001	SF428_1-HE
1250	chr3L	13574606	13574616	chr3L	13580143	13580153	Rt1c	6	5536	7.5	7.0	7.2	0.7	5547	chr3L	13574606	intron	bru-3 -	chr3L	13577380	intron	bru-3 -	chr3L	13580153	intron	bru-3 -	chr3L_6_13575001	chr3L_13575001	SF428_1-HE
1256	chr3L	13804522	13804566	chr3L	13822834	13822878	roo	17	18311	7.5	4.0	5.8	2.5	18356	chr3L	13804522	intergenic	not near genes	chr3L	13813700	intergenic	not near genes	chr3L	13822878	intergenic	not near genes	chr3L_17_13810001	chr3L_13810001	SF428_1-HE
1268	chr3L	14245548	14245586	chr3L	14245667	14245706	1360	12	119	6.5	6.0	6.2	1.7	158	chr3L	14245548	3` UTR	CR44561 -	chr3L	14245627	3` UTR	CR44561 -	chr3L	14245706	intergenic	CR44561 -,CR44560 +	chr3L_12_14245001	chr3L_14245001	SF428_1-HE
1269	chr3L	14267347	14267383	chr3L	14271813	14271849	F-element	8	4466	4.5	2.0	3.2	1.9	4502	chr3L	14267347	intergenic	not near genes	chr3L	14269598	intergenic	not near genes	chr3L	14271849	intergenic	not near genes	chr3L_8_14265001	chr3L_14265001	SF428_1-HE
1271	chr3L	14296004	14296014	chr3L	14296525	14296535	roo	6	520	6.0	8.0	7.0	0.8	531	chr3L	14296004	intron	fz +	chr3L	14296270	intron	fz +	chr3L	14296535	intron	fz +	chr3L_6_14295001	chr3L_14295001	SF428_1-HE
1272	chr3L	14312001	14312053	chr3L	14316836	14316875	X-element	13	4838	3.5	5.0	4.2	2.5	4874	chr3L	14312001	exon	fz +	chr3L	14314438	intron	fz +	chr3L	14316875	intron	fz +	chr3L_13_14310001	chr3L_14310001	SF428_1-HE
1278	chr3L	14468425	14468471	chr3L	14473657	14473703	copia	18	5231	3.5	2.5	3.0	4.5	5278	chr3L	14468425	intron	bbg -	chr3L	14471064	intron	bbg -	chr3L	14473703	intron	bbg -	chr3L_18_14470001	chr3L_14470001	SF428_1-HE
1282	chr3L	14524297	14524336	chr3L	14529085	14529121	F-element	5	4787	2.5	0.5	1.5	2.0	4824	chr3L	14524297	intron	bbg -	chr3L	14526709	intron	bbg -	chr3L	14529121	intron	bbg -	chr3L_5_14525001	chr3L_14525001	SF428_1-HE
1286	chr3L	14721164	14721203	chr3L	14723033	14723072	Rt1c	4	1869	6.5	6.0	6.2	0.6	1908	chr3L	14721164	intron	ome +	chr3L	14722118	intron	ome +	chr3L	14723072	intron	ome +	chr3L_4_14720001	chr3L_14720001	SF428_1-HE
1288	chr3L	14725581	14725617	chr3L	14728601	14728637	Doc	6	3019	0.0	5.0	2.5	1.7	3056	chr3L	14725581	intron	ome +	chr3L	14727109	intron	ome +	chr3L	14728637	intron	ome +	chr3L_6_14725001	chr3L_14725001	SF428_1-HE
1309	chr3L	15423739	15423770	chr3L	15426609	15426640	opus	8	2870	5.5	1.0	3.2	1.9	2901	chr3L	15423739	intergenic	not near genes	chr3L	15425190	intergenic	not near genes	chr3L	15426640	intergenic	not near genes	chr3L_8_15425001	chr3L_15425001	SF428_1-HE
1312	chr3L	15554908	15554941	chr3L	15556721	15556754	S-element	7	1813	1.5	4.0	2.8	1.8	1846	chr3L	15554908	intron	AGO2 +	chr3L	15555831	intron	AGO2 +	chr3L	15556754	intron	AGO2 +	chr3L_7_15555001	chr3L_15555001	SF428_1-HE
1323	chr3L	16184085	16184124	chr3L	16188930	16188969	X-element	12	4845	1.5	6.0	3.8	2.5	4884	chr3L	16184085	intergenic	not near genes	chr3L	16186527	intergenic	not near genes	chr3L	16188969	intergenic	not near genes	chr3L_12_16185001	chr3L_16185001	SF428_1-HE
1328	chr3L	16443824	16443877	chr3L	16446189	16446243	Doc	9	2366	1.5	4.5	3.0	2.2	2419	chr3L	16443824	intron,intron	CG33158 +,dsx-c73A -	chr3L	16445034	intron,intron	CG33158 +,dsx-c73A -	chr3L	16446243	intron,intron	CG33158 +,dsx-c73A -	chr3L_9_16445001	chr3L_16445001	SF428_1-HE
1330	chr3L	16493956	16494004	chr3L	16494499	16494546	jockey	7	542	6.0	8.0	7.0	0.9	590	chr3L	16493956	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L	16494251	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L	16494546	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L_7_16490001	chr3L_16490001	SF428_1-HE
1335	chr3L	16684011	16684035	chr3L	16689258	16689282	copia	4	5247	1.5	5.5	3.5	0.9	5271	chr3L	16684011	intron,intron	Lasp -,CG43954 -	chr3L	16686646	intron,intron	Lasp -,CG43954 -	chr3L	16689282	intron,intron,5` UTR	Lasp -,CG43954 -,CR45179 +	chr3L_4_16685001	chr3L_16685001	SF428_1-HE
1342	chr3L	16945704	16945739	chr3L	16954883	16954918	roo	7	9179	7.0	5.5	6.2	1.0	9214	chr3L	16945704	exon	Obp73a +	chr3L	16950311	intergenic	not near genes	chr3L	16954918	5` UTR	Nc73EF +	chr3L_7_16950001	chr3L_16950001	SF428_1-HE
1345	chr3L	17084979	17085029	chr3L	17094154	17094204	roo	20	9174	6.5	7.5	7.0	2.5	9225	chr3L	17084979	intron	Rbp6 -	chr3L	17089592	intron	Rbp6 -	chr3L	17094204	intron	Rbp6 -	chr3L_20_17085001	chr3L_17085001	SF428_1-HE
1352	chr3L	17516962	17517008	chr3L	17524546	17524592	412	10	7584	4.0	2.0	3.0	2.5	7630	chr3L	17516962	intron	CG7564 +	chr3L	17520777	intron	CG7564 +	chr3L	17524592	3` UTR	CG7564 +	chr3L_10_17520001	chr3L_17520001	SF428_1-HE
1357	chr3L	17730828	17730874	chr3L	17738184	17738230	mdg1	5	7356	1.5	3.0	2.2	1.6	7402	chr3L	17730828	intron	Ccn +	chr3L	17734529	intron	Ccn +	chr3L	17738230	intron	Ccn +	chr3L_5_17730001	chr3L_17730001	SF428_1-HE
1358	chr3L	17799808	17799840	chr3L	17801621	17801653	S-element	4	1813	2.0	1.5	1.8	1.4	1845	chr3L	17799808	intron	NUCB1 -	chr3L	17800730	intron	NUCB1 -	chr3L	17801653	intron	NUCB1 -	chr3L_4_17800001	chr3L_17800001	SF428_1-HE
1363	chr3L	18047687	18047731	chr3L	18056770	18056814	roo	6	9083	1.0	2.5	1.8	2.1	9127	chr3L	18047687	intron	Eip75B -	chr3L	18052250	intron	Eip75B -	chr3L	18056814	intron	Eip75B -	chr3L_6_18050001	chr3L_18050001	SF428_1-HE
1381	chr3L	18506113	18506149	chr3L	18509602	18509638	F-element	8	3488	5.0	0.0	2.5	2.3	3525	chr3L	18506113	intergenic	not near genes	chr3L	18507876	intergenic	not near genes	chr3L	18509638	intergenic	not near genes	chr3L_8_18505001	chr3L_18505001	SF428_1-HE
1382	chr3L	18514890	18514933	chr3L	18520107	18520149	BS	6	5217	1.5	2.0	1.8	2.1	5259	chr3L	18514890	intergenic	not near genes	chr3L	18517520	intergenic	not near genes	chr3L	18520149	intergenic	not near genes	chr3L_6_18515001	chr3L_18515001	SF428_1-HE
1383	chr3L	18528628	18528657	chr3L	18537829	18537867	roo	4	9208	1.0	0.0	0.5	2.7	9239	chr3L	18528628	intergenic	not near genes	chr3L	18533248	intergenic	not near genes	chr3L	18537867	intergenic	not near genes	chr3L_4_18530001	chr3L_18530001	SF428_1-HE
1385	chr3L	18593925	18593980	chr3L	18595930	18595989	Doc	5	2006	2.0	1.0	1.5	2.0	2064	chr3L	18593925	intergenic	term -	chr3L	18594957	intergenic	not near genes	chr3L	18595989	intergenic	CR45389 +	chr3L_5_18590001	chr3L_18590001	SF428_1-HE
1387	chr3L	18710742	18710782	chr3L	18718720	18718760	Stalker2	7	7978	5.0	3.0	4.0	1.4	8018	chr3L	18710742	intergenic	not near genes	chr3L	18714751	intergenic	not near genes	chr3L	18718760	intergenic	not near genes	chr3L_7_18710001	chr3L_18710001	SF428_1-HE
1389	chr3L	18772383	18772438	chr3L	18781090	18781144	roo	14	8706	1.5	2.5	2.0	4.7	8761	chr3L	18772383	intron	ftz-f1 -	chr3L	18776764	intron	ftz-f1 -	chr3L	18781144	intron	ftz-f1 -	chr3L_14_18775001	chr3L_18775001	SF428_1-HE
1394	chr3L	18833763	18833810	chr3L	18834953	18835000	1360	12	1189	3.0	3.0	3.0	3.0	1237	chr3L	18833763	intron	Indy -	chr3L	18834382	intron	Indy -	chr3L	18835000	intron	Indy -	chr3L_12_18830001	chr3L_18830001	SF428_1-HE
1398	chr3L	19008826	19008868	chr3L	19009190	19009232	jockey	12	364	5.0	7.5	6.2	1.7	406	chr3L	19008826	intron	nkd -	chr3L	19009029	intron	nkd -	chr3L	19009232	intron	nkd -	chr3L_12_19005001	chr3L_19005001	SF428_1-HE
1405	chr3L	19115632	19115666	chr3L	19115815	19115871	BS	4	200	3.5	0.5	2.0	1.3	239	chr3L	19115632	intron	CG14082 -	chr3L	19115752	intron	CG14082 -	chr3L	19115871	intron	CG14082 -	chr3L_4_19115001	chr3L_19115001	SF428_1-HE
1406	chr3L	19117020	19117039	chr3L	19124493	19124512	mdg1	5	7472	6.0	3.0	4.5	0.9	7492	chr3L	19117020	intron	CG14082 -	chr3L	19120766	intron	CG14082 -	chr3L	19124512	intron	CG14082 -	chr3L_5_19120001	chr3L_19120001	SF428_1-HE
1408	chr3L	19208038	19208092	chr3L	19209438	19209493	Doc	14	1400	1.0	2.0	1.5	5.6	1455	chr3L	19208038	intron	fz2 -	chr3L	19208766	intron	fz2 -	chr3L	19209493	intron	fz2 -	chr3L_14_19205001	chr3L_19205001	SF428_1-HE
1420	chr3L	19820274	19820304	chr3L	19827849	19827879	412	4	7575	1.0	2.5	1.8	1.4	7605	chr3L	19820274	intron	Deaf1 +	chr3L	19824076	intron	Deaf1 +	chr3L	19827879	intron	Deaf1 +	chr3L_4_19820001	chr3L_19820001	SF428_1-HE
1427	chr3L	20257308	20257362	chr3L	20258454	20258508	pogo	9	1145	0.5	3.0	1.8	3.2	1200	chr3L	20257308	intron	rdgC +	chr3L	20257908	intron	rdgC +	chr3L	20258508	intron	rdgC +	chr3L_9_20255001	chr3L_20255001	SF428_1-HE
1431	chr3L	20590039	20590091	chr3L	20590604	20590656	412	10	561	1.5	2.0	1.8	3.6	617	chr3L	20590039	intergenic	not near genes	chr3L	20590348	intergenic	not near genes	chr3L	20590656	intergenic	not near genes	chr3L_10_20590001	chr3L_20590001	SF428_1-HE
1438	chr3L	21014893	21014948	chr3L	21023400	21023442	Tirant	24	8505	3.0	10.0	6.5	3.2	8549	chr3L	21014893	intron	skd -	chr3L	21019168	intron	skd -	chr3L	21023442	intron	skd -	chr3L_24_21015001	chr3L_21015001	SF428_1-HE
1440	chr3L	21151841	21151893	chr3L	21156951	21157003	flea	12	5110	3.0	1.0	2.0	4.0	5162	chr3L	21151841	intron	Ac78C -	chr3L	21154422	intron	Ac78C -	chr3L	21157003	intron	Ac78C -	chr3L_12_21150001	chr3L_21150001	SF428_1-HE
1441	chr3L	21243726	21243740	chr3L	21251315	21251329	412	4	7589	3.0	1.5	2.2	1.2	7603	chr3L	21243726	intron	Eip78C +	chr3L	21247528	intron	Eip78C +	chr3L	21251329	intron	Eip78C +	chr3L_4_21245001	chr3L_21245001	SF428_1-HE
1443	chr3L	21372696	21372744	chr3L	21379230	21379278	McClintock	6	6534	1.0	3.0	2.0	2.0	6582	chr3L	21372696	intergenic	not near genes	chr3L	21375987	intergenic	not near genes	chr3L	21379278	intergenic	not near genes	chr3L_6_21375001	chr3L_21375001	SF428_1-HE
1446	chr3L	21498836	21498862	chr3L	21500478	21500523	1360	7	1659	1.5	0.5	1.0	3.5	1687	chr3L	21498836	intron	Glg1 -	chr3L	21499680	intron	Glg1 -	chr3L	21500523	intron	Glg1 -	chr3L_7_21495001	chr3L_21495001	SF428_1-HE
1448	chr3L	21749310	21749339	chr3L	21754494	21754525	Doc	4	5186	2.0	3.0	2.5	1.1	5215	chr3L	21749310	intron	Syn1 -	chr3L	21751918	intron	Syn1 -	chr3L	21754525	intron	Syn1 -	chr3L_4_21750001	chr3L_21750001	SF428_1-HE
1453	chr3L	22099663	22099685	chr3L	22105875	22105896	3S18	6	6212	6.0	2.0	4.0	1.2	6233	chr3L	22099663	intergenic	not near genes	chr3L	22102780	intergenic	not near genes	chr3L	22105896	intergenic	not near genes	chr3L_6_22100001	chr3L_22100001	SF428_1-HE
1468	chr3L	22555749	22555797	chr3L	22563245	22563285	blood	7	7494	1.5	2.0	1.8	2.5	7536	chr3L	22555749	intergenic	not near genes	chr3L	22559517	intergenic	not near genes	chr3L	22563285	intergenic	not near genes	chr3L_7_22555001	chr3L_22555001	SF428_1-HE
1470	chr3L	22577604	22577642	chr3L	22582418	22582456	Doc	7	4814	3.0	3.0	3.0	1.8	4852	chr3L	22577604	intergenic	not near genes	chr3L	22580030	intergenic	not near genes	chr3L	22582456	3` UTR	CG14459 -	chr3L_7_22580001	chr3L_22580001	SF428_1-HE
1481	chr3L	22989839	22989877	chr3L	22996839	22996877	297	5	7000	4.5	1.0	2.8	1.3	7038	chr3L	22989839	intergenic	not near genes	chr3L	22993358	intergenic	not near genes	chr3L	22996877	intergenic	not near genes	chr3L_5_22990001	chr3L_22990001	SF428_1-HE
1492	chr3L	24012410	24012424	chr3L	24020776	24020791	roo	5	8367	1.0	1.5	1.2	2.3	8381	chr3L	24012410	intergenic	not near genes	chr3L	24016600	intergenic	not near genes	chr3L	24020791	intergenic	not near genes	chr3L_5_24015001	chr3L_24015001	SF428_1-HE
1493	chr3L	24021274	24021311	chr3L	24022457	24022494	1360	6	1183	0.0	3.5	1.8	2.1	1220	chr3L	24021274	intergenic	not near genes	chr3L	24021884	intergenic	not near genes	chr3L	24022494	intergenic	not near genes	chr3L_6_24020001	chr3L_24020001	SF428_1-HE
1494	chr3L	24168761	24168817	chr3L	24176115	24176171	ZAM	26	7353	6.5	4.5	5.5	4.0	7410	chr3L	24168761	intron	Snap25 +	chr3L	24172466	intron	Snap25 +	chr3L	24176171	intron	Snap25 +	chr3L_26_24170001	chr3L_24170001	SF428_1-HE
1496	chr3L	24791872	24791909	chr3L	24796677	24796714	Doc	13	4805	3.5	2.5	3.0	3.2	4842	chr3L	24791872	intergenic	not near genes	chr3L	24794293	intergenic	not near genes	chr3L	24796714	intergenic	not near genes	chr3L_13_24790001	chr3L_24790001	SF428_1-HE
1497	chr3L	25190061	25190082	chr3L	25191237	25191258	1360	6	1176	14.0	6.5	10.2	0.5	1197	chr3L	25190061	intergenic	not near genes	chr3L	25190660	intergenic	not near genes	chr3L	25191258	intergenic	not near genes	chr3L_6_25190001	chr3L_25190001	SF428_1-HE
1503	chr3L	25628492	25628510	chr3L	25633289	25633307	F-element	5	4796	8.0	6.0	7.0	0.6	4815	chr3L	25628492	intron	CG41343 -	chr3L	25630900	intron	CG41343 -	chr3L	25633307	intron	CG41343 -	chr3L_5_25630001	chr3L_25630001	SF428_1-HE
1510	chr3R	1252445	1252452	chr3R	1266230	1266237	297	6	13785	26.0	17.5	21.8	0.3	13792	chr3R	1252445	intergenic	not near genes	chr3R	1259341	intergenic	not near genes	chr3R	1266237	intergenic	not near genes	chr3R_6_1255001	chr3R_1255001	SF428_1-HE
1516	chr3R	4366738	4366772	chr3R	4375146	4375181	roo	5	8409	2.5	1.5	2.0	1.7	8443	chr3R	4366738	3` UTR	CG1090 +	chr3R	4370960	intergenic	not near genes	chr3R	4375181	5` UTR	CR44922 +	chr3R_5_4370001	chr3R_4370001	SF428_1-HE
1520	chr3R	4609523	4609580	chr3R	4610713	4610750	1360	16	1188	3.5	4.5	4.0	3.2	1227	chr3R	4609523	intergenic	not near genes	chr3R	4610136	intergenic	not near genes	chr3R	4610750	intergenic	not near genes	chr3R_16_4610001	chr3R_4610001	SF428_1-HE
1525	chr3R	4683152	4683208	chr3R	4684937	4684976	S-element	13	1781	5.5	6.0	5.8	1.9	1824	chr3R	4683152	intron	CG43427 +	chr3R	4684064	intron	CG43427 +	chr3R	4684976	intron	CG43427 +	chr3R_13_4680001	chr3R_4680001	SF428_1-HE
1527	chr3R	4753230	4753263	chr3R	4757559	4757592	F-element	7	4329	4.0	2.0	3.0	1.8	4362	chr3R	4753230	intron,intron	atms +,CG44098 -	chr3R	4755411	intron,intron	atms +,CG44098 -	chr3R	4757592	intron,exon	atms +,CG44098 -	chr3R_7_4755001	chr3R_4755001	SF428_1-HE
1528	chr3R	4759701	4759743	chr3R	4761224	4761266	hopper2	10	1522	2.0	3.0	2.5	2.9	1565	chr3R	4759701	intron,intron	atms +,CG44098 -	chr3R	4760484	intron,intron	atms +,CG44098 -	chr3R	4761266	intron,intron	atms +,CG44098 -	chr3R_10_4760001	chr3R_4760001	SF428_1-HE
1531	chr3R	4887461	4887488	chr3R	4894864	4894885	rover	4	7400	3.0	6.5	4.8	0.7	7424	chr3R	4887461	intergenic	not near genes	chr3R	4891173	intergenic	not near genes	chr3R	4894885	intergenic	not near genes	chr3R_4_4890001	chr3R_4890001	SF428_1-HE
1536	chr3R	5045826	5045869	chr3R	5052953	5052997	HMS-Beagle	6	7128	1.5	2.5	2.0	2.0	7171	chr3R	5045826	3` UTR	CR43635 -	chr3R	5049412	intergenic	not near genes	chr3R	5052997	intergenic	CR45588 -	chr3R_6_5045001	chr3R_5045001	SF428_1-HE
1537	chr3R	5067956	5068013	chr3R	5073499	5073556	mdg3	16	5543	4.0	2.5	3.2	3.8	5600	chr3R	5067956	intergenic	not near genes	chr3R	5070756	intergenic	not near genes	chr3R	5073556	intergenic	not near genes	chr3R_16_5070001	chr3R_5070001	SF428_1-HE
1543	chr3R	5338374	5338426	chr3R	5343577	5343615	Rt1c	17	5202	7.0	7.5	7.2	2.1	5241	chr3R	5338374	intron	mtd -	chr3R	5340994	intron	mtd -	chr3R	5343615	intron	mtd -	chr3R_17_5340001	chr3R_5340001	SF428_1-HE
1546	chr3R	5809100	5809141	chr3R	5809367	5809408	pogo	6	266	1.0	3.0	2.0	2.0	308	chr3R	5809100	3` UTR	CG11000 +	chr3R	5809254	3` UTR	CG11000 +	chr3R	5809408	3` UTR	CG11000 +	chr3R_6_5805001	chr3R_5805001	SF428_1-HE
1547	chr3R	5822357	5822403	chr3R	5823550	5823596	1360	8	1193	2.5	1.0	1.8	2.9	1239	chr3R	5822357	3` UTR	CG2023 -	chr3R	5822976	3` UTR	CG2023 -	chr3R	5823596	3` UTR	CG2023 -	chr3R_8_5820001	chr3R_5820001	SF428_1-HE
1549	chr3R	5927543	5927572	chr3R	5927809	5927838	pogo	4	266	2.5	1.0	1.8	1.4	295	chr3R	5927543	intron	CG34113 -	chr3R	5927690	intron	CG34113 -	chr3R	5927838	intron	CG34113 -	chr3R_4_5925001	chr3R_5925001	SF428_1-HE
1550	chr3R	6015940	6015991	chr3R	6024445	6024498	Tirant	7	8507	2.5	1.0	1.8	2.5	8558	chr3R	6015940	intergenic	not near genes	chr3R	6020219	intergenic	not near genes	chr3R	6024498	intergenic	not near genes	chr3R_7_6020001	chr3R_6020001	SF428_1-HE
1552	chr3R	6158487	6158536	chr3R	6167091	6167142	Tirant	6	8607	2.0	2.0	2.0	2.0	8655	chr3R	6158487	intergenic	not near genes	chr3R	6162814	intergenic	not near genes	chr3R	6167142	intergenic	CG1077 +	chr3R_6_6160001	chr3R_6160001	SF428_1-HE
1554	chr3R	6206265	6206305	chr3R	6206508	6206548	BS	5	243	5.0	1.0	3.0	1.2	283	chr3R	6206265	exon	Osi24 +	chr3R	6206406	intron	Osi24 +	chr3R	6206548	intron	Osi24 +	chr3R_5_6205001	chr3R_6205001	SF428_1-HE
1565	chr3R	6737471	6737524	chr3R	6739284	6739337	Doc	4	1813	2.0	2.0	2.0	1.3	1866	chr3R	6737471	intron	pb -	chr3R	6738404	intron	pb -	chr3R	6739337	intron	pb -	chr3R_4_6735001	chr3R_6735001	SF428_1-HE
1585	chr3R	7694553	7694606	chr3R	7713640	7713693	invader3	13	19087	2.0	4.0	3.0	3.2	19140	chr3R	7694553	3` UTR	Nlg1 +	chr3R	7704123	intergenic	not near genes	chr3R	7713693	intergenic	not near genes	chr3R_13_7700001	chr3R_7700001	SF428_1-HE
1587	chr3R	7729443	7729496	chr3R	7737407	7737460	Stalker2	12	7964	5.0	6.0	5.5	1.8	8017	chr3R	7729443	intergenic	not near genes	chr3R	7733452	intergenic	not near genes	chr3R	7737460	intergenic	not near genes	chr3R_12_7730001	chr3R_7730001	SF428_1-HE
1589	chr3R	7849557	7849671	chr3R	7850808	7850864	1360	5	1228	0.0	2.5	1.2	2.3	1307	chr3R	7849557	intron	CG34384 +	chr3R	7850210	intron	CG34384 +	chr3R	7850864	intron	CG34384 +	chr3R_5_7850001	chr3R_7850001	SF428_1-HE
1591	chr3R	7973310	7973335	chr3R	7974389	7974423	1360	6	1086	1.0	1.5	1.2	2.7	1113	chr3R	7973310	intergenic	not near genes	chr3R	7973866	intergenic	not near genes	chr3R	7974423	3` UTR	CD98hc -	chr3R_6_7970001	chr3R_7970001	SF428_1-HE
1594	chr3R	8090541	8090567	chr3R	8094044	8094070	297	7	3501	3.5	8.0	5.8	1.0	3529	chr3R	8090541	intergenic	CR44330 +	chr3R	8092306	intergenic	not near genes	chr3R	8094070	intergenic	CG7900 +	chr3R_7_8090001	chr3R_8090001	SF428_1-HE
1595	chr3R	8094387	8094427	chr3R	8099718	8099758	Transpac	9	5330	3.5	1.0	2.2	2.8	5371	chr3R	8094387	intron	CG7900 +	chr3R	8097072	intron	CG7900 +	chr3R	8099758	intron	CG7900 +	chr3R_9_8095001	chr3R_8095001	SF428_1-HE
1596	chr3R	8101742	8101785	chr3R	8104851	8104883	G2	12	3108	5.0	4.5	4.8	2.1	3141	chr3R	8101742	exon	CG7900 +	chr3R	8103312	intron	CG7900 +	chr3R	8104883	3` UTR	CG7900 +	chr3R_12_8100001	chr3R_8100001	SF428_1-HE
1599	chr3R	8402983	8403036	chr3R	8412175	8412227	roo	28	9191	11.5	7.5	9.5	2.7	9244	chr3R	8402983	intron	CG45263 -	chr3R	8407605	intron	CG45263 -	chr3R	8412227	intron	CG45263 -	chr3R_28_8405001	chr3R_8405001	SF428_1-HE
1601	chr3R	8570469	8570500	chr3R	8575131	8575163	HMS-Beagle	5	4663	2.5	1.0	1.8	1.8	4694	chr3R	8570469	intergenic	not near genes	chr3R	8572816	intergenic	not near genes	chr3R	8575163	intergenic	not near genes	chr3R_5_8570001	chr3R_8570001	SF428_1-HE
1602	chr3R	8601750	8601793	chr3R	8610929	8610972	roo	7	9179	4.5	5.0	4.8	1.2	9222	chr3R	8601750	intron	5-HT2B +	chr3R	8606361	intron	5-HT2B +	chr3R	8610972	intron	5-HT2B +	chr3R_7_8605001	chr3R_8605001	SF428_1-HE
1604	chr3R	8707337	8707377	chr3R	8709803	8709844	jockey	6	2467	6.0	5.5	5.8	0.9	2507	chr3R	8707337	intergenic	not near genes	chr3R	8708590	intergenic	not near genes	chr3R	8709844	intergenic	not near genes	chr3R_6_8705001	chr3R_8705001	SF428_1-HE
1610	chr3R	8894851	8894902	chr3R	8896033	8896084	1360	14	1182	2.5	2.0	2.2	4.4	1233	chr3R	8894851	intron	pyd -	chr3R	8895468	intron	pyd -	chr3R	8896084	intron	pyd -	chr3R_14_8895001	chr3R_8895001	SF428_1-HE
1611	chr3R	8898198	8898213	chr3R	8913801	8913821	297	7	15606	6.0	3.0	4.5	1.3	15623	chr3R	8898198	intron	pyd -	chr3R	8906010	intron	pyd -	chr3R	8913821	intron	pyd -	chr3R_7_8905001	chr3R_8905001	SF428_1-HE
1622	chr3R	9278776	9278799	chr3R	9284061	9284085	Rt1a	4	5286	0.0	2.5	1.2	1.8	5309	chr3R	9278776	intergenic	not near genes	chr3R	9281430	intergenic	not near genes	chr3R	9284085	intergenic	not near genes	chr3R_4_9280001	chr3R_9280001	SF428_1-HE
1625	chr3R	9319554	9319600	chr3R	9320010	9320061	jockey	8	460	3.5	3.0	3.2	1.9	507	chr3R	9319554	intron	CG8861 -	chr3R	9319808	intron	CG8861 -	chr3R	9320061	intron	CG8861 -	chr3R_8_9315001	chr3R_9315001	SF428_1-HE
1627	chr3R	9361811	9361841	chr3R	9362076	9362108	pogo	6	266	2.5	4.0	3.2	1.4	297	chr3R	9361811	3` UTR	CG45050 +	chr3R	9361960	3` UTR	CG45050 +	chr3R	9362108	3` UTR	CG45050 +	chr3R_6_9360001	chr3R_9360001	SF428_1-HE
1636	chr3R	10231770	10231812	chr3R	10237373	10237415	mdg3	14	5603	1.0	2.0	1.5	5.6	5645	chr3R	10231770	intron	CG42795 +	chr3R	10234592	intron	CG42795 +	chr3R	10237415	intron	CG42795 +	chr3R_14_10230001	chr3R_10230001	SF428_1-HE
1663	chr3R	11379214	11379269	chr3R	11388395	11388415	roo	8	9174	4.0	6.0	5.0	1.3	9201	chr3R	11379214	intron	pros +	chr3R	11383814	intron	pros +	chr3R	11388415	intron	pros +	chr3R_8_11380001	chr3R_11380001	SF428_1-HE
1666	chr3R	11841049	11841078	chr3R	11846261	11846295	BS	10	5216	5.0	2.5	3.8	2.1	5246	chr3R	11841049	intron	CG6959 -	chr3R	11843672	intron	CG6959 -	chr3R	11846295	intron	CG6959 -	chr3R_10_11840001	chr3R_11840001	SF428_1-HE
1668	chr3R	12022858	12022915	chr3R	12025061	12025118	pogo	6	2203	2.0	4.0	3.0	1.5	2260	chr3R	12022858	intergenic	not near genes	chr3R	12023988	intergenic	not near genes	chr3R	12025118	intergenic	not near genes	chr3R_6_12020001	chr3R_12020001	SF428_1-HE
1685	chr3R	12780278	12780296	chr3R	12780416	12780431	BS	7	137	4.5	0.0	2.2	2.2	153	chr3R	12780278	intron	beat-Vc -	chr3R	12780354	intron	beat-Vc -	chr3R	12780431	intron	beat-Vc -	chr3R_7_12780001	chr3R_12780001	SF428_1-HE
1689	chr3R	12920138	12920175	chr3R	12925367	12925404	copia	8	5229	2.5	3.5	3.0	2.0	5266	chr3R	12920138	intron	beat-Vb +	chr3R	12922771	intron	beat-Vb +	chr3R	12925404	intron	beat-Vb +	chr3R_8_12920001	chr3R_12920001	SF428_1-HE
1695	chr3R	13143021	13143065	chr3R	13148623	13148658	mdg3	6	5600	2.0	3.0	2.5	1.7	5637	chr3R	13143021	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13145840	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13148658	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R_6_13145001	chr3R_13145001	SF428_1-HE
1710	chr3R	14021617	14021648	chr3R	14023468	14023499	S-element	6	1851	8.0	4.0	6.0	0.9	1882	chr3R	14021617	intron	rdx -	chr3R	14022558	intron	rdx -	chr3R	14023499	intron	rdx -	chr3R_6_14020001	chr3R_14020001	SF428_1-HE
1718	chr3R	14180784	14180843	chr3R	14185575	14185634	F-element	10	4790	3.5	1.0	2.2	3.1	4850	chr3R	14180784	intron	Dop1R1 -	chr3R	14183209	intron	Dop1R1 -	chr3R	14185634	intron	Dop1R1 -	chr3R_10_14180001	chr3R_14180001	SF428_1-HE
1719	chr3R	14246390	14246415	chr3R	14247889	14247937	jockey	6	1518	2.0	3.0	2.5	1.7	1547	chr3R	14246390	intergenic	not near genes	chr3R	14247164	intergenic	not near genes	chr3R	14247937	intergenic	not near genes	chr3R_6_14245001	chr3R_14245001	SF428_1-HE
1732	chr3R	15041413	15041452	chr3R	15045206	15045246	Doc	11	3792	1.5	4.5	3.0	2.8	3833	chr3R	15041413	intergenic	not near genes	chr3R	15043330	intergenic	not near genes	chr3R	15045246	intergenic	not near genes	chr3R_11_15040001	chr3R_15040001	SF428_1-HE
1733	chr3R	15079786	15079839	chr3R	15080049	15080106	pogo	6	266	2.5	1.5	2.0	2.0	320	chr3R	15079786	3` UTR	CG6966 -	chr3R	15079946	3` UTR	CG6966 -	chr3R	15080106	3` UTR	CG6966 -	chr3R_6_15075001	chr3R_15075001	SF428_1-HE
1734	chr3R	15102480	15102525	chr3R	15109760	15109806	412	8	7281	3.0	4.0	3.5	1.8	7326	chr3R	15102480	intron	CG42788 -	chr3R	15106143	intron	CG42788 -	chr3R	15109806	intron	CG42788 -	chr3R_8_15105001	chr3R_15105001	SF428_1-HE
1735	chr3R	15132043	15132076	chr3R	15135129	15135162	Juan	14	3086	5.5	5.5	5.5	2.2	3119	chr3R	15132043	intergenic	CG42788 -	chr3R	15133602	intergenic	not near genes	chr3R	15135162	3` UTR	CG6912 -	chr3R_14_15130001	chr3R_15130001	SF428_1-HE
1739	chr3R	15162529	15162548	chr3R	15167323	15167340	F-element	6	4794	3.0	4.5	3.8	1.2	4811	chr3R	15162529	intron	Gyc88E +	chr3R	15164934	intron	Gyc88E +	chr3R	15167340	intron	Gyc88E +	chr3R_6_15160001	chr3R_15160001	SF428_1-HE
1744	chr3R	15601144	15601195	chr3R	15608692	15608743	412	18	7548	1.5	4.0	2.8	4.7	7599	chr3R	15601144	intergenic	not near genes	chr3R	15604944	intergenic	not near genes	chr3R	15608743	intergenic	not near genes	chr3R_18_15600001	chr3R_15600001	SF428_1-HE
1745	chr3R	15618708	15618752	chr3R	15626208	15626252	blood	7	7498	4.5	4.0	4.2	1.3	7544	chr3R	15618708	intergenic	not near genes	chr3R	15622480	intergenic	not near genes	chr3R	15626252	intergenic	not near genes	chr3R_7_15620001	chr3R_15620001	SF428_1-HE
1749	chr3R	15735225	15735237	chr3R	15739971	15739982	F-element	5	4746	1.5	10.0	5.8	0.7	4757	chr3R	15735225	intergenic	not near genes	chr3R	15737604	intergenic	not near genes	chr3R	15739982	intergenic	not near genes	chr3R_5_15735001	chr3R_15735001	SF428_1-HE
1769	chr3R	16756293	16756345	chr3R	16762510	16762558	diver	11	6216	3.5	0.5	2.0	3.7	6265	chr3R	16756293	intron	bxd -	chr3R	16759426	intron	bxd -	chr3R	16762558	intron	bxd -	chr3R_11_16755001	chr3R_16755001	SF428_1-HE
1783	chr3R	17346666	17346706	chr3R	17348255	17348295	F-element	6	1589	2.5	3.5	3.0	1.5	1629	chr3R	17346666	intron	beat-IIa -	chr3R	17347480	intron	beat-IIa -	chr3R	17348295	intron	beat-IIa -	chr3R_6_17345001	chr3R_17345001	SF428_1-HE
1789	chr3R	17509226	17509244	chr3R	17516807	17516825	412	4	7580	3.0	2.0	2.5	1.1	7599	chr3R	17509226	intergenic	not near genes	chr3R	17513026	intergenic	not near genes	chr3R	17516825	intergenic	not near genes	chr3R_4_17510001	chr3R_17510001	SF428_1-HE
1801	chr3R	17925831	17925876	chr3R	17927324	17927360	hobo	17	1492	6.0	6.5	6.2	2.4	1529	chr3R	17925831	intron	cpo +	chr3R	17926596	intron	cpo +	chr3R	17927360	intron	cpo +	chr3R_17_17925001	chr3R_17925001	SF428_1-HE
1807	chr3R	18032803	18032807	chr3R	18040502	18040506	opus	4	7699	0.0	3.5	1.8	1.4	7703	chr3R	18032803	intergenic	not near genes	chr3R	18036654	intergenic	not near genes	chr3R	18040506	intergenic	not near genes	chr3R_4_18035001	chr3R_18035001	SF428_1-HE
1820	chr3R	18606501	18606505	chr3R	18610749	18610753	F-element	4	4248	4.5	0.0	2.2	1.2	4252	chr3R	18606501	intron,intron	qin +,CG14304 -	chr3R	18608627	intron,intron	qin +,CG14304 -	chr3R	18610753	intron,intron	qin +,CG14304 -	chr3R_4_18605001	chr3R_18605001	SF428_1-HE
1860	chr3R	20109513	20109566	chr3R	20114743	20114798	copia	4	5232	2.0	3.5	2.8	1.1	5285	chr3R	20109513	intergenic	not near genes	chr3R	20112156	intergenic	not near genes	chr3R	20114798	intergenic	CG10887 +	chr3R_4_20110001	chr3R_20110001	SF428_1-HE
1861	chr3R	20156680	20156694	chr3R	20165876	20165884	roo	4	9194	4.0	2.0	3.0	1.0	9204	chr3R	20156680	intergenic	not near genes	chr3R	20161282	intergenic	not near genes	chr3R	20165884	intergenic	not near genes	chr3R_4_20160001	chr3R_20160001	SF428_1-HE
1862	chr3R	20245261	20245292	chr3R	20248897	20248928	F-element	4	3636	3.0	2.0	2.5	1.1	3667	chr3R	20245261	3` UTR	Nlg4 +	chr3R	20247094	intergenic	not near genes	chr3R	20248928	intergenic	not near genes	chr3R_4_20245001	chr3R_20245001	SF428_1-HE
1865	chr3R	20266489	20266534	chr3R	20272986	20273030	Burdock	9	6497	2.5	2.0	2.2	2.8	6541	chr3R	20266489	intron	cic +	chr3R	20269760	intron	cic +	chr3R	20273030	intron	cic +	chr3R_9_20265001	chr3R_20265001	SF428_1-HE
1871	chr3R	20506578	20506607	chr3R	20507406	20507436	BS	4	829	1.5	2.5	2.0	1.3	858	chr3R	20506578	intergenic	Or92a +	chr3R	20507007	intergenic	CG4288 -	chr3R	20507436	3` UTR	CG4288 -	chr3R_4_20505001	chr3R_20505001	SF428_1-HE
1872	chr3R	20512981	20513024	chr3R	20515710	20515753	opus	4	2729	0.5	0.5	0.5	2.7	2772	chr3R	20512981	intergenic	not near genes	chr3R	20514367	intergenic	not near genes	chr3R	20515753	intergenic	not near genes	chr3R_4_20510001	chr3R_20510001	SF428_1-HE
1881	chr3R	20854461	20854507	chr3R	20859277	20859323	Doc	8	4816	1.5	1.0	1.2	3.6	4862	chr3R	20854461	intron	Ir93a -	chr3R	20856892	intron	Ir93a -	chr3R	20859323	exon	Ir93a -	chr3R_8_20855001	chr3R_20855001	SF428_1-HE
1888	chr3R	21141658	21141706	chr3R	21150165	21150210	Tirant	5	8505	2.5	2.5	2.5	1.4	8552	chr3R	21141658	intron	SNF4Agamma +	chr3R	21145934	intron	SNF4Agamma +	chr3R	21150210	intron	SNF4Agamma +	chr3R_5_21145001	chr3R_21145001	SF428_1-HE
1901	chr3R	21608982	21609032	chr3R	21611642	21611692	NOF	16	2660	5.0	1.5	3.2	3.8	2710	chr3R	21608982	intron	InR -	chr3R	21610337	intron	InR -	chr3R	21611692	intron	InR -	chr3R_16_21610001	chr3R_21610001	SF428_1-HE
1903	chr3R	21761098	21761145	chr3R	21768516	21768563	mdg1	5	7418	3.0	1.5	2.2	1.6	7465	chr3R	21761098	exon	CG42335 +	chr3R	21764830	intron	CG42335 +	chr3R	21768563	exon	CG42335 +	chr3R_5_21760001	chr3R_21760001	SF428_1-HE
1922	chr3R	22234658	22234714	chr3R	22236001	22236059	pogo	13	1344	1.0	4.0	2.5	3.7	1401	chr3R	22234658	intron	SKIP +	chr3R	22235358	intron	SKIP +	chr3R	22236059	intron	SKIP +	chr3R_13_22235001	chr3R_22235001	SF428_1-HE
1928	chr3R	22450531	22450571	chr3R	22453197	22453237	NOF	10	2666	1.0	3.0	2.0	3.3	2706	chr3R	22450531	intron	CG34376 +	chr3R	22451884	intron	CG34376 +	chr3R	22453237	intron	CG34376 +	chr3R_10_22450001	chr3R_22450001	SF428_1-HE
1945	chr3R	22881184	22881231	chr3R	22884916	22884962	Doc	4	3731	1.5	2.0	1.8	1.4	3778	chr3R	22881184	intergenic	not near genes	chr3R	22883073	intergenic	not near genes	chr3R	22884962	intergenic	not near genes	chr3R_4_22880001	chr3R_22880001	SF428_1-HE
1967	chr3R	23558372	23558410	chr3R	23560179	23560204	Bari1	12	1806	2.5	3.0	2.8	3.2	1832	chr3R	23558372	intron	beat-IV +	chr3R	23559288	intron	beat-IV +	chr3R	23560204	intron	beat-IV +	chr3R_12_23555001	chr3R_23555001	SF428_1-HE
1972	chr3R	23684673	23684720	chr3R	23685185	23685232	roo	4	506	3.5	4.5	4.0	0.8	559	chr3R	23684673	exon	CG18754 +	chr3R	23684952	intron	CG18754 +	chr3R	23685232	exon	CG18754 +	chr3R_4_23680001	chr3R_23680001	SF428_1-HE
1981	chr3R	24072062	24072105	chr3R	24072526	24072569	jockey	16	460	8.0	7.5	7.8	1.8	507	chr3R	24072062	intron	4EHP -	chr3R	24072316	intron	4EHP -	chr3R	24072569	intron	4EHP -	chr3R_16_24070001	chr3R_24070001	SF428_1-HE
1983	chr3R	24076901	24076937	chr3R	24078393	24078429	hobo	10	1492	8.5	3.0	5.8	1.5	1528	chr3R	24076901	intron	4EHP -	chr3R	24077665	intron	4EHP -	chr3R	24078429	intron	4EHP -	chr3R_10_24075001	chr3R_24075001	SF428_1-HE
1991	chr3R	24594651	24594663	chr3R	24594917	24594929	pogo	4	266	4.5	11.0	7.8	0.5	278	chr3R	24594651	intron	mld +	chr3R	24594790	intron	mld +	chr3R	24594929	intron	mld +	chr3R_4_24590001	chr3R_24590001	SF428_1-HE
1997	chr3R	24927102	24927147	chr3R	24931919	24931964	Doc	7	4815	1.0	2.0	1.5	2.8	4862	chr3R	24927102	intergenic	Trf4-2 +	chr3R	24929533	intergenic	not near genes	chr3R	24931964	intergenic	CG11771 +	chr3R_7_24925001	chr3R_24925001	SF428_1-HE
2015	chr3R	25832677	25832716	chr3R	25841885	25841924	roo	6	9208	2.5	4.0	3.2	1.4	9247	chr3R	25832677	exon	alpha4GT2 +	chr3R	25837300	intron	alpha4GT2 +	chr3R	25841924	exon	alpha4GT2 +	chr3R_6_25835001	chr3R_25835001	SF428_1-HE
2028	chr3R	26376301	26376341	chr3R	26385487	26385527	roo	10	9186	1.0	0.0	0.5	6.7	9226	chr3R	26376301	intergenic	not near genes	chr3R	26380914	intergenic	not near genes	chr3R	26385527	intergenic	not near genes	chr3R_10_26380001	chr3R_26380001	SF428_1-HE
2031	chr3R	26510501	26510532	chr3R	26519582	26519613	roo	15	9081	6.0	6.0	6.0	2.1	9112	chr3R	26510501	intron	plum -	chr3R	26515057	intron	plum -	chr3R	26519613	intron,5` UTR	plum -,CR45226 +	chr3R_15_26515001	chr3R_26515001	SF428_1-HE
2033	chr3R	26558320	26558354	chr3R	26565658	26565692	Stalker4	11	7338	3.5	5.0	4.2	2.1	7372	chr3R	26558320	intron	scrib +	chr3R	26562006	intron	scrib +	chr3R	26565692	intron	scrib +	chr3R_11_26560001	chr3R_26560001	SF428_1-HE
2036	chr3R	26642721	26642744	chr3R	26643140	26643163	jockey	5	419	2.0	1.5	1.8	1.8	442	chr3R	26642721	intergenic	not near genes	chr3R	26642942	intergenic	not near genes	chr3R	26643163	intergenic	not near genes	chr3R_5_26640001	chr3R_26640001	SF428_1-HE
2039	chr3R	26810539	26810578	chr3R	26811047	26811089	roo	10	511	4.0	4.0	4.0	2.0	550	chr3R	26810539	intron	Tl +	chr3R	26810814	intron	Tl +	chr3R	26811089	intron	Tl +	chr3R_10_26810001	chr3R_26810001	SF428_1-HE
2044	chr3R	27007385	27007429	chr3R	27016546	27016583	roo	6	9160	3.0	4.0	3.5	1.3	9198	chr3R	27007385	intron	RYa-R +	chr3R	27011984	intron	RYa-R +	chr3R	27016583	intron	RYa-R +	chr3R_6_27010001	chr3R_27010001	SF428_1-HE
2048	chr3R	27140489	27140545	chr3R	27148125	27148181	412	14	7636	4.0	3.0	3.5	3.1	7692	chr3R	27140489	intron	CG6051 -	chr3R	27144335	intron	CG6051 -	chr3R	27148181	intron	CG6051 -	chr3R_14_27140001	chr3R_27140001	SF428_1-HE
2049	chr3R	27342771	27342818	chr3R	27351376	27351425	Tirant	5	8607	6.5	4.5	5.5	0.8	8654	chr3R	27342771	intron	CG42534 +	chr3R	27347098	intron	CG42534 +	chr3R	27351425	intron	CG42534 +	chr3R_5_27345001	chr3R_27345001	SF428_1-HE
2054	chr3R	27725548	27725583	chr3R	27731016	27731051	I-element	4	5468	3.5	2.5	3.0	1.0	5503	chr3R	27725548	intergenic	not near genes	chr3R	27728300	intergenic	not near genes	chr3R	27731051	intergenic	not near genes	chr3R_4_27725001	chr3R_27725001	SF428_1-HE
2058	chr3R	27791634	27791647	chr3R	27794793	27794793	Rt1c	5	3160	5.0	4.5	4.8	0.9	3159	chr3R	27791634	intron	CG34353 -	chr3R	27793214	intron	CG34353 -	chr3R	27794793	intron	CG34353 -	chr3R_5_27790001	chr3R_27790001	SF428_1-HE
2061	chr3R	27856736	27856788	chr3R	27858244	27858297	hopper2	18	1507	6.5	5.0	5.8	2.6	1561	chr3R	27856736	intron	CG34353 -	chr3R	27857516	intron	CG34353 -	chr3R	27858297	intron	CG34353 -	chr3R_18_27855001	chr3R_27855001	SF428_1-HE
2062	chr3R	27875680	27875724	chr3R	27882756	27882805	297	9	7080	3.5	3.5	3.5	2.0	7125	chr3R	27875680	intron	CG34353 -	chr3R	27879242	intron	CG34353 -	chr3R	27882805	intron	CG34353 -	chr3R_9_27875001	chr3R_27875001	SF428_1-HE
2067	chr3R	28068483	28068514	chr3R	28073951	28073982	I-element	5	5468	0.0	4.5	2.2	1.6	5499	chr3R	28068483	intron	CG34362 +	chr3R	28071232	intron	CG34362 +	chr3R	28073982	intron	CG34362 +	chr3R_5_28070001	chr3R_28070001	SF428_1-HE
2070	chr3R	28253319	28253355	chr3R	28255855	28255891	jockey	8	2536	7.0	6.0	6.5	1.1	2572	chr3R	28253319	intergenic	not near genes	chr3R	28254605	intergenic	not near genes	chr3R	28255891	intergenic	not near genes	chr3R_8_28250001	chr3R_28250001	SF428_1-HE
2082	chr3R	28792842	28792890	chr3R	28797963	28797997	jockey	8	5118	3.5	3.5	3.5	1.8	5155	chr3R	28792842	intergenic	not near genes	chr3R	28795420	intergenic	not near genes	chr3R	28797997	intergenic	not near genes	chr3R_8_28795001	chr3R_28795001	SF428_1-HE
2089	chr3R	29079358	29079403	chr3R	29080756	29080801	NOF	6	1398	5.5	4.5	5.0	1.0	1443	chr3R	29079358	intron	CG11873 +	chr3R	29080080	intron	CG11873 +	chr3R	29080801	intron	CG11873 +	chr3R_6_29080001	chr3R_29080001	SF428_1-HE
2094	chr3R	29319825	29319831	chr3R	29320170	29320176	jockey	4	345	5.5	4.0	4.8	0.7	351	chr3R	29319825	intergenic	Cnx99A -	chr3R	29320000	intergenic	Cnx99A -	chr3R	29320176	intergenic	not near genes	chr3R_4_29320001	chr3R_29320001	SF428_1-HE
2099	chr3R	29406604	29406629	chr3R	29407916	29407941	jockey	8	1311	5.5	4.5	5.0	1.3	1337	chr3R	29406604	intron	Ptp99A +	chr3R	29407272	intron	Ptp99A +	chr3R	29407941	intron	Ptp99A +	chr3R_8_29405001	chr3R_29405001	SF428_1-HE
2111	chr3R	29882004	29882050	chr3R	29891187	29891209	roo	5	9178	0.0	1.5	0.8	2.8	9205	chr3R	29882004	intron	CG31038 +	chr3R	29886606	intron	CG31038 +	chr3R	29891209	intron	CG31038 +	chr3R_5_29885001	chr3R_29885001	SF428_1-HE
2112	chr3R	30084846	30084864	chr3R	30086339	30086357	hobo	4	1493	1.0	3.5	2.2	1.2	1511	chr3R	30084846	intron	sima +	chr3R	30085602	intron	sima +	chr3R	30086357	intron	sima +	chr3R_4_30085001	chr3R_30085001	SF428_1-HE
2113	chr3R	30238740	30238776	chr3R	30239930	30239967	1360	4	1190	3.5	0.0	1.8	1.4	1227	chr3R	30238740	intergenic	not near genes	chr3R	30239354	intergenic	not near genes	chr3R	30239967	intergenic	not near genes	chr3R_4_30235001	chr3R_30235001	SF428_1-HE
2118	chr3R	30317326	30317359	chr3R	30324944	30324977	roo	5	7618	0.0	1.0	0.5	3.3	7651	chr3R	30317326	intron	hdc +	chr3R	30321152	intron	hdc +	chr3R	30324977	intron	hdc +	chr3R_5_30320001	chr3R_30320001	SF428_1-HE
2129	chr3R	30679510	30679551	chr3R	30687005	30687045	blood	7	7494	0.0	2.0	1.0	3.5	7535	chr3R	30679510	intergenic	not near genes	chr3R	30683278	intergenic	not near genes	chr3R	30687045	intergenic	not near genes	chr3R_7_30680001	chr3R_30680001	SF428_1-HE
2135	chr3R	30818791	30818809	chr3R	30820382	30820399	1360	4	1591	1.0	1.0	1.0	2.0	1608	chr3R	30818791	intron	cindr +	chr3R	30819595	intron	cindr +	chr3R	30820399	intron	cindr +	chr3R_4_30815001	chr3R_30815001	SF428_1-HE
2146	chr3R	31279351	31279395	chr3R	31285568	31285612	diver	6	6217	2.0	0.5	1.2	2.7	6261	chr3R	31279351	intergenic	not near genes	chr3R	31282482	intergenic	not near genes	chr3R	31285612	intergenic	not near genes	chr3R_6_31280001	chr3R_31280001	SF428_1-HE
2152	chr3R	31691517	31691561	chr3R	31696308	31696353	Doc	14	4789	2.5	4.0	3.2	3.3	4836	chr3R	31691517	intergenic	not near genes	chr3R	31693935	intergenic	not near genes	chr3R	31696353	intergenic	not near genes	chr3R_14_31690001	chr3R_31690001	SF428_1-HE
2157	chr3R	31997970	31998020	chr3R	32005466	32005490	blood	10	7493	4.0	1.0	2.5	2.9	7520	chr3R	31997970	intron	heph -	chr3R	32001730	intron	heph -	chr3R	32005490	intron	heph -	chr3R_10_32000001	chr3R_32000001	SF428_1-HE
2161	chr4	671578	671622	chr4	680187	680230	Tirant	13	8609	4.0	6.5	5.2	2.1	8652	chr4	671578	intron	CG11360 +	chr4	675904	intron	CG11360 +	chr4	680230	intron	CG11360 +	chr4_13_675001	chr4_675001	SF428_1-HE
2166	chrX	295830	295872	chrX	303476	303518	412	10	7646	5.0	5.0	5.0	1.7	7688	chrX	295830	intron	CG3777 +	chrX	299674	intron	CG3777 +	chrX	303518	intron	CG3777 +	chrX_10_295001	chrX_295001	SF428_1-HE
2167	chrX	318454	318490	chrX	323566	323602	flea	12	5112	2.5	7.5	5.0	2.0	5148	chrX	318454	intron,intron	CG3777 +,CG32816 -	chrX	321028	intron,intron	CG3777 +,CG32816 -	chrX	323602	intron,intron	CG3777 +,CG32816 -	chrX_12_320001	chrX_320001	SF428_1-HE
2169	chrX	428396	428444	chrX	434622	434670	3S18	6	6226	3.0	1.5	2.2	1.9	6274	chrX	428396	intron	CG32816 -	chrX	431533	intron	CG32816 -	chrX	434670	intron	CG32816 -	chrX_6_430001	chrX_430001	SF428_1-HE
2172	chrX	551400	551455	chrX	558988	559041	412	16	7585	8.0	5.5	6.8	2.1	7641	chrX	551400	intron	Appl +	chrX	555220	intron	Appl +	chrX	559041	intron	Appl +	chrX_16_555001	chrX_555001	SF428_1-HE
2178	chrX	693902	693927	chrX	694025	694050	INE-1	6	123	2.5	10.5	6.5	0.8	148	chrX	693902	intron	sdk +	chrX	693976	intron	sdk +	chrX	694050	intron	sdk +	chrX_6_690001	chrX_690001	SF428_1-HE
2184	chrX	827583	827629	chrX	835401	835447	roo	9	7815	4.0	4.5	4.2	1.7	7864	chrX	827583	intron	CG43867 -	chrX	831515	intron	CG43867 -	chrX	835447	intron	CG43867 -	chrX_9_830001	chrX_830001	SF428_1-HE
2187	chrX	906678	906733	chrX	908493	908548	S-element	14	1814	2.5	3.5	3.0	3.5	1870	chrX	906678	intron	CG43867 -	chrX	907613	intron	CG43867 -	chrX	908548	intron	CG43867 -	chrX_14_905001	chrX_905001	SF428_1-HE
2195	chrX	1357754	1357802	chrX	1367950	1367998	Doc	9	10196	3.0	3.5	3.2	2.1	10244	chrX	1357754	intergenic	png -	chrX	1362876	intergenic	not near genes	chrX	1367998	intergenic	not near genes	chrX_9_1360001	chrX_1360001	SF428_1-HE
2198	chrX	1930534	1930558	chrX	1938131	1938155	opus	4	7597	0.0	1.0	0.5	2.7	7621	chrX	1930534	intergenic	CG11596 +	chrX	1934344	intergenic	not near genes	chrX	1938155	3` UTR	CG3857 -	chrX_4_1930001	chrX_1930001	SF428_1-HE
2202	chrX	2399819	2399829	chrX	2408198	2408208	roo	5	8379	8.0	0.0	4.0	1.0	8389	chrX	2399819	intergenic	not near genes	chrX	2404014	intergenic	not near genes	chrX	2408208	intergenic	not near genes	chrX_5_2400001	chrX_2400001	SF428_1-HE
2203	chrX	2399834	2399871	chrX	2408194	2408238	roo	5	8367	5.5	0.0	2.8	1.3	8404	chrX	2399834	intergenic	not near genes	chrX	2404036	intergenic	not near genes	chrX	2408238	intergenic	not near genes	chrX_5_2400001	chrX_2400001	SF428_1-HE
2211	chrX	2664355	2664404	chrX	2665537	2665592	1360	15	1184	3.5	5.0	4.2	2.9	1237	chrX	2664355	intron	sgg +	chrX	2664974	intron	sgg +	chrX	2665592	intron	sgg +	chrX_15_2660001	chrX_2660001	SF428_1-HE
2216	chrX	2844882	2844927	chrX	2852318	2852361	mdg1	17	7436	3.5	5.5	4.5	3.1	7479	chrX	2844882	intron	kirre +	chrX	2848622	intron	kirre +	chrX	2852361	intron	kirre +	chrX_17_2845001	chrX_2845001	SF428_1-HE
2224	chrX	3415007	3415039	chrX	3421218	3421250	3S18	7	6211	1.0	2.0	1.5	2.8	6243	chrX	3415007	intron,intron	CR44999 +,CG12535 -	chrX	3418128	intron,intron	CR44999 +,CG12535 -	chrX	3421250	intron,intron	CR44999 +,CG12535 -	chrX_7_3415001	chrX_3415001	SF428_1-HE
2225	chrX	3493074	3493117	chrX	3502259	3502302	roo	7	9184	2.5	1.5	2.0	2.3	9228	chrX	3493074	intron,intron	CR44999 +,Gas8 -	chrX	3497688	intron,intron	CR44999 +,Gas8 -	chrX	3502302	intron,intron	CR44999 +,Gas8 -	chrX_7_3495001	chrX_3495001	SF428_1-HE
2230	chrX	3726738	3726775	chrX	3730161	3730198	NOF	9	3423	4.0	0.0	2.0	3.0	3460	chrX	3726738	intron	tlk +	chrX	3728468	intron	tlk +	chrX	3730198	intron	tlk +	chrX_9_3725001	chrX_3725001	SF428_1-HE
2232	chrX	3752387	3752394	chrX	3764762	3764769	17.6	4	12375	12.0	4.0	8.0	0.4	12382	chrX	3752387	intron	tlk +	chrX	3758578	intron	tlk +	chrX	3764769	intron	tlk +	chrX_4_3755001	chrX_3755001	SF428_1-HE
2235	chrX	3842333	3842350	chrX	3842572	3842589	pogo	4	239	6.0	2.5	4.2	0.8	256	chrX	3842333	intron	ec +	chrX	3842461	intron	ec +	chrX	3842589	intron	ec +	chrX_4_3840001	chrX_3840001	SF428_1-HE
2237	chrX	3986839	3986867	chrX	3994498	3994499	412	4	7652	6.0	0.0	3.0	1.0	7660	chrX	3986839	intergenic	not near genes	chrX	3990669	intergenic	not near genes	chrX	3994499	intergenic	not near genes	chrX_4_3990001	chrX_3990001	SF428_1-HE
2241	chrX	4157860	4157901	chrX	4164937	4164978	297	13	7077	7.0	6.0	6.5	1.7	7118	chrX	4157860	intron	Fas2 -	chrX	4161419	intron	Fas2 -	chrX	4164978	intron	Fas2 -	chrX_13_4160001	chrX_4160001	SF428_1-HE
2255	chrX	4700370	4700419	chrX	4700739	4700787	jockey	13	369	3.5	1.0	2.2	4.1	417	chrX	4700370	3` UTR	ctp +	chrX	4700578	3` UTR	ctp +	chrX	4700787	3` UTR	ctp +	chrX_13_4700001	chrX_4700001	SF428_1-HE
2258	chrX	4763236	4763277	chrX	4763750	4763789	Stalker4	6	513	4.5	2.0	3.2	1.4	553	chrX	4763236	intergenic	not near genes	chrX	4763512	intergenic	not near genes	chrX	4763789	intergenic	not near genes	chrX_6_4760001	chrX_4760001	SF428_1-HE
2261	chrX	4827948	4828001	chrX	4835345	4835366	Stalker4	29	7392	5.0	6.5	5.8	4.3	7418	chrX	4827948	intergenic	not near genes	chrX	4831657	intergenic	not near genes	chrX	4835366	intergenic	not near genes	chrX_29_4830001	chrX_4830001	SF428_1-HE
2265	chrX	5096250	5096304	chrX	5103841	5103895	springer	21	7590	8.5	2.5	5.5	3.2	7645	chrX	5096250	intron,intron	CG15465 +,rg +	chrX	5100072	intron,intron	CG15465 +,rg +	chrX	5103895	intron,intron	CG15465 +,rg +	chrX_21_5100001	chrX_5100001	SF428_1-HE
2269	chrX	5338688	5338724	chrX	5339964	5339995	jockey	10	1277	3.5	5.0	4.2	1.9	1307	chrX	5338688	intergenic	not near genes	chrX	5339342	intergenic	not near genes	chrX	5339995	intergenic	SK +	chrX_10_5335001	chrX_5335001	SF428_1-HE
2278	chrX	5884150	5884189	chrX	5884417	5884455	pogo	6	266	3.5	2.0	2.8	1.6	305	chrX	5884150	intron	CR45668 -	chrX	5884302	intron	CR45668 -	chrX	5884455	intron	CR45668 -	chrX_6_5880001	chrX_5880001	SF428_1-HE
2282	chrX	6171564	6171609	chrX	6179021	6179067	Quasimodo	4	7454	4.0	5.5	4.8	0.7	7503	chrX	6171564	intron	Ca-alpha1T -	chrX	6175316	intron	Ca-alpha1T -	chrX	6179067	intron	Ca-alpha1T -	chrX_4_6175001	chrX_6175001	SF428_1-HE
2287	chrX	6392857	6392895	chrX	6397648	6397686	Doc	12	4791	0.5	6.5	3.5	2.7	4829	chrX	6392857	intergenic	not near genes	chrX	6395272	intergenic	not near genes	chrX	6397686	intergenic	not near genes	chrX_12_6395001	chrX_6395001	SF428_1-HE
2291	chrX	6562805	6562849	chrX	6571313	6571357	Tirant	14	8508	1.0	4.5	2.8	3.7	8552	chrX	6562805	intron	CG34417 +	chrX	6567081	intron	CG34417 +	chrX	6571357	intron	CG34417 +	chrX_14_6565001	chrX_6565001	SF428_1-HE
2300	chrX	7023595	7023626	chrX	7031011	7031042	Tabor	7	7416	1.5	3.5	2.5	2.0	7447	chrX	7023595	intron	CG12541 -	chrX	7027318	intron	CG12541 -	chrX	7031042	intron	CG12541 -	chrX_7_7025001	chrX_7025001	SF428_1-HE
2313	chrX	7702888	7702928	chrX	7703353	7703393	jockey	13	465	10.5	10.0	10.2	1.2	505	chrX	7702888	intron	CHES-1-like -	chrX	7703140	intron	CHES-1-like -	chrX	7703393	intron	CHES-1-like -	chrX_13_7700001	chrX_7700001	SF428_1-HE
2316	chrX	7845704	7845738	chrX	7847221	7847255	hopper2	13	1517	1.5	0.0	0.8	7.2	1551	chrX	7845704	intergenic	not near genes	chrX	7846480	intergenic	not near genes	chrX	7847255	intergenic	not near genes	chrX_13_7845001	chrX_7845001	SF428_1-HE
2319	chrX	8031418	8031441	chrX	8035753	8035776	Juan	4	4335	4.5	5.0	4.8	0.7	4358	chrX	8031418	intergenic	not near genes	chrX	8033597	intergenic	not near genes	chrX	8035776	3` UTR	CG2233 -	chrX_4_8030001	chrX_8030001	SF428_1-HE
2322	chrX	8364822	8364873	chrX	8365245	8365291	BS	10	422	2.5	3.5	3.0	2.5	469	chrX	8364822	intron	nAChRalpha3 -	chrX	8365056	intron	nAChRalpha3 -	chrX	8365291	intron	nAChRalpha3 -	chrX_10_8365001	chrX_8365001	SF428_1-HE
2333	chrX	8922304	8922359	chrX	8922764	8922819	jockey	12	459	5.0	4.5	4.8	2.1	515	chrX	8922304	intron	rdgA +	chrX	8922562	intron	rdgA +	chrX	8922819	intron	rdgA +	chrX_12_8920001	chrX_8920001	SF428_1-HE
2334	chrX	8927568	8927608	chrX	8929864	8929903	NOF	8	2295	4.5	2.0	3.2	1.9	2335	chrX	8927568	intron	rdgA +	chrX	8928736	intron	rdgA +	chrX	8929903	intron	rdgA +	chrX_8_8925001	chrX_8925001	SF428_1-HE
2335	chrX	8948766	8948790	chrX	8956299	8956323	roo	4	7533	0.5	2.5	1.5	1.6	7557	chrX	8948766	intron	rdgA +	chrX	8952544	intron	rdgA +	chrX	8956323	intron	rdgA +	chrX_4_8950001	chrX_8950001	SF428_1-HE
2344	chrX	9508116	9508158	chrX	9509660	9509702	jockey	13	1544	2.5	7.5	5.0	2.2	1586	chrX	9508116	intron	CG32700 -	chrX	9508909	intron	CG32700 -	chrX	9509702	intron	CG32700 -	chrX_13_9505001	chrX_9505001	SF428_1-HE
2345	chrX	9575773	9575816	chrX	9576123	9576166	mdg3	14	347	3.0	0.5	1.8	5.0	393	chrX	9575773	intron,exon	CG32699 -,CG42395 -	chrX	9575970	intron,intron	CG32699 -,CG42395 -	chrX	9576166	intron,5` UTR	CG32699 -,CG42395 -	chrX_14_9575001	chrX_9575001	SF428_1-HE
2357	chrX	10138217	10138233	chrX	10145750	10145766	412	4	7533	4.0	2.5	3.2	1.0	7549	chrX	10138217	intron,intron	RhoU +,CR44894 -	chrX	10141992	intron,intron	RhoU +,CR44894 -	chrX	10145766	intron,intron	RhoU +,CR44894 -	chrX_4_10140001	chrX_10140001	SF428_1-HE
2369	chrX	10550831	10550876	chrX	10552324	10552367	hobo	11	1493	3.0	2.5	2.8	2.9	1536	chrX	10550831	intron	spri -	chrX	10551599	intron	spri -	chrX	10552367	intron	spri -	chrX_11_10550001	chrX_10550001	SF428_1-HE
2372	chrX	10686046	10686071	chrX	10691213	10691243	roo	7	5171	5.5	0.0	2.8	1.8	5197	chrX	10686046	intron	X11Lbeta +	chrX	10688644	intron	X11Lbeta +	chrX	10691243	intron	X11Lbeta +	chrX_7_10685001	chrX_10685001	SF428_1-HE
2375	chrX	10772655	10772698	chrX	10772764	10772785	Tirant	4	102	3.0	1.5	2.2	1.2	130	chrX	10772655	intron	CG15211 +	chrX	10772720	intron	CG15211 +	chrX	10772785	intron	CG15211 +	chrX_4_10770001	chrX_10770001	SF428_1-HE
2385	chrX	11268550	11268590	chrX	11270068	11270109	hopper2	7	1516	1.5	5.0	3.2	1.7	1559	chrX	11268550	intron	CG44422 -	chrX	11269330	intron	CG44422 -	chrX	11270109	intron	CG44422 -	chrX_7_11265001	chrX_11265001	SF428_1-HE
2389	chrX	11535032	11535039	chrX	11541528	11541535	Burdock	4	6496	8.5	1.5	5.0	0.7	6503	chrX	11535032	intron	Drak +	chrX	11538284	intron	Drak +	chrX	11541535	intron	Drak +	chrX_4_11535001	chrX_11535001	SF428_1-HE
2391	chrX	11571436	11571480	chrX	11571703	11571747	pogo	6	267	2.0	2.0	2.0	2.0	311	chrX	11571436	3` UTR	Kmn1 -	chrX	11571592	3` UTR	Kmn1 -	chrX	11571747	3` UTR	Kmn1 -	chrX_6_11570001	chrX_11570001	SF428_1-HE
2392	chrX	11633390	11633443	chrX	11640470	11640523	297	12	7080	1.5	5.5	3.5	2.7	7133	chrX	11633390	intron	Ptp10D +	chrX	11636956	intron	Ptp10D +	chrX	11640523	intron	Ptp10D +	chrX_12_11635001	chrX_11635001	SF428_1-HE
2403	chrX	12168127	12168153	chrX	12173595	12173621	I-element	6	5468	2.0	4.5	3.2	1.4	5494	chrX	12168127	intron	Ten-a +	chrX	12170874	intron	Ten-a +	chrX	12173621	intron	Ten-a +	chrX_6_12170001	chrX_12170001	SF428_1-HE
2428	chrX	13401456	13401483	chrX	13401834	13401861	jockey	5	378	3.5	1.5	2.5	1.4	405	chrX	13401456	intergenic	CG1673 +,CG12725 -	chrX	13401658	intergenic	CG12725 -,CG1673 +	chrX	13401861	3` UTR	CG12725 -	chrX_5_13400001	chrX_13400001	SF428_1-HE
2429	chrX	13403005	13403011	chrX	13403158	13403164	X-element	5	153	2.5	1.5	2.0	1.7	159	chrX	13403005	intergenic	CG12725 -	chrX	13403084	intergenic	CG12725 -	chrX	13403164	intergenic	CG12725 -	chrX_5_13400001	chrX_13400001	SF428_1-HE
2430	chrX	13429440	13429483	chrX	13430615	13430658	jockey	11	1175	1.0	3.0	2.0	3.7	1218	chrX	13429440	intergenic	not near genes	chrX	13430049	intergenic	not near genes	chrX	13430658	intergenic	not near genes	chrX_11_13430001	chrX_13430001	SF428_1-HE
2443	chrX	13937953	13938004	chrX	13941250	13941299	I-element	8	3297	1.0	1.5	1.2	3.6	3346	chrX	13937953	intron	mamo -	chrX	13939626	intron	mamo -	chrX	13941299	intron	mamo -	chrX_8_13935001	chrX_13935001	SF428_1-HE
2447	chrX	14104999	14105050	chrX	14114176	14114227	roo	12	9176	5.0	2.0	3.5	2.7	9228	chrX	14104999	intergenic	not near genes	chrX	14109613	intergenic	not near genes	chrX	14114227	5` UTR	CR44657 +	chrX_12_14105001	chrX_14105001	SF428_1-HE
2459	chrX	14589690	14589708	chrX	14589957	14589974	pogo	4	266	1.0	4.5	2.8	1.1	284	chrX	14589690	intron	CG9413 -	chrX	14589832	intron	CG9413 -	chrX	14589974	intron	CG9413 -	chrX_4_14585001	chrX_14585001	SF428_1-HE
2461	chrX	14636440	14636484	chrX	14641901	14641951	I-element	7	5466	3.0	2.5	2.8	1.8	5511	chrX	14636440	intron	NetA -	chrX	14639196	intron	NetA -	chrX	14641951	intron	NetA -	chrX_7_14635001	chrX_14635001	SF428_1-HE
2467	chrX	14778013	14778049	chrX	14782836	14782872	Doc	7	4823	4.0	3.0	3.5	1.6	4859	chrX	14778013	intergenic	CG5347 +	chrX	14780442	intergenic	not near genes	chrX	14782872	intergenic	Ag5r2 -	chrX_7_14780001	chrX_14780001	SF428_1-HE
2471	chrX	14936845	14936878	chrX	14946128	14946161	roo	9	9283	2.5	0.0	1.2	4.1	9316	chrX	14936845	intron	pdgy -	chrX	14941503	intron	pdgy -	chrX	14946161	intron	pdgy -	chrX_9_14940001	chrX_14940001	SF428_1-HE
2475	chrX	15273683	15273720	chrX	15274875	15274913	1360	12	1192	7.5	5.5	6.5	1.6	1230	chrX	15273683	intergenic	not near genes	chrX	15274298	intergenic	not near genes	chrX	15274913	intergenic	not near genes	chrX_12_15270001	chrX_15270001	SF428_1-HE
2478	chrX	15413037	15413071	chrX	15417350	15417399	Juan	11	4326	8.0	2.5	5.2	1.8	4362	chrX	15413037	intron	Cngl -	chrX	15415218	intron	Cngl -	chrX	15417399	intron	Cngl -	chrX_11_15415001	chrX_15415001	SF428_1-HE
2480	chrX	15421895	15421944	chrX	15423432	15423475	pogo	7	1536	7.5	4.5	6.0	1.0	1580	chrX	15421895	intron	Cngl -	chrX	15422685	intron	Cngl -	chrX	15423475	intron	Cngl -	chrX_7_15420001	chrX_15420001	SF428_1-HE
2481	chrX	15435689	15435700	chrX	15436148	15436159	rover	4	459	11.0	15.5	13.2	0.3	470	chrX	15435689	intron	Cngl -	chrX	15435924	intron	Cngl -	chrX	15436159	intron	Cngl -	chrX_4_15435001	chrX_15435001	SF428_1-HE
2498	chrX	16222786	16222802	chrX	16231162	16231177	roo	6	8376	1.0	2.5	1.8	2.1	8391	chrX	16222786	intergenic	not near genes	chrX	16226982	intergenic	not near genes	chrX	16231177	intergenic	not near genes	chrX_6_16225001	chrX_16225001	SF428_1-HE
2499	chrX	16245933	16245962	chrX	16246063	16246095	INE-1	10	133	4.5	4.0	4.2	1.9	162	chrX	16245933	intergenic	not near genes	chrX	16246014	intergenic	not near genes	chrX	16246095	intergenic	not near genes	chrX_10_16245001	chrX_16245001	SF428_1-HE
2501	chrX	16340655	16340698	chrX	16349825	16349881	roo	4	9176	0.0	2.0	1.0	2.0	9226	chrX	16340655	intergenic	Dsp1 +	chrX	16345268	intergenic	not near genes	chrX	16349881	intergenic	sl +	chrX_4_16345001	chrX_16345001	SF428_1-HE
2504	chrX	16492623	16492666	chrX	16498226	16498269	mdg3	13	5602	8.0	5.5	6.8	1.7	5646	chrX	16492623	intron	para -	chrX	16495446	intron	para -	chrX	16498269	exon	para -	chrX_13_16495001	chrX_16495001	SF428_1-HE
2529	chrX	17792938	17792978	chrX	17796261	17796302	flea	15	3323	2.5	5.5	4.0	3.0	3364	chrX	17792938	intron	OdsH +	chrX	17794620	intron	OdsH +	chrX	17796302	intron	OdsH +	chrX_15_17790001	chrX_17790001	SF428_1-HE
2537	chrX	18194068	18194100	chrX	18194629	18194661	BS	9	559	6.0	4.0	5.0	1.5	593	chrX	18194068	intron	Frq2 +	chrX	18194364	intron	Frq2 +	chrX	18194661	intron	Frq2 +	chrX_9_18190001	chrX_18190001	SF428_1-HE
2560	chrX	19060384	19060409	chrX	19065194	19065219	Doc	4	4810	6.0	5.5	5.8	0.6	4835	chrX	19060384	intron	CG14190 +	chrX	19062802	intron	CG14190 +	chrX	19065219	intron	CG14190 +	chrX_4_19060001	chrX_19060001	SF428_1-HE
2566	chrX	19136534	19136583	chrX	19143480	19143528	412	13	6944	5.5	7.0	6.2	1.8	6994	chrX	19136534	intergenic	not near genes	chrX	19140031	intergenic	not near genes	chrX	19143528	3` UTR	RhoGAP18B -	chrX_13_19140001	chrX_19140001	SF428_1-HE
2567	chrX	19134436	19134459	chrX	19143894	19143917	412	4	9458	13.5	11.0	12.2	0.3	9481	chrX	19134436	intergenic	not near genes	chrX	19139176	intergenic	not near genes	chrX	19143917	intron	RhoGAP18B -	chrX_4_19135001	chrX_19135001	SF428_1-HE
2574	chrX	19356990	19357023	chrX	19358528	19358566	NOF	13	1542	4.0	0.0	2.0	4.3	1576	chrX	19356990	intron	kek5 +	chrX	19357778	intron	kek5 +	chrX	19358566	intron	kek5 +	chrX_13_19355001	chrX_19355001	SF428_1-HE
2577	chrX	19380147	19380187	chrX	19380410	19380455	pogo	10	268	3.0	5.5	4.2	1.9	308	chrX	19380147	intron	kek5 +	chrX	19380301	intron	kek5 +	chrX	19380455	intron	kek5 +	chrX_10_19380001	chrX_19380001	SF428_1-HE
2581	chrX	19472100	19472153	chrX	19472696	19472748	jockey	12	594	2.0	1.0	1.5	4.8	648	chrX	19472100	intergenic	kek5 +	chrX	19472424	intergenic	not near genes	chrX	19472748	intergenic	not near genes	chrX_12_19470001	chrX_19470001	SF428_1-HE
2588	chrX	19710049	19710086	chrX	19711861	19711898	S-element	5	1812	3.5	2.5	3.0	1.2	1849	chrX	19710049	intron	meso18E -	chrX	19710974	intron	meso18E -	chrX	19711898	intron	meso18E -	chrX_5_19710001	chrX_19710001	SF428_1-HE
2590	chrX	19797325	19797339	chrX	19804664	19804678	Stalker4	8	7339	15.0	11.5	13.2	0.6	7353	chrX	19797325	intergenic	not near genes	chrX	19801002	intergenic	not near genes	chrX	19804678	intergenic	not near genes	chrX_8_19800001	chrX_19800001	SF428_1-HE
2621	chrX	20504103	20504150	chrX	20505650	20505697	transib2	7	1547	2.0	4.0	3.0	1.8	1594	chrX	20504103	intron	RhoGAP19D -	chrX	20504900	intron	RhoGAP19D -	chrX	20505697	intron	RhoGAP19D -	chrX_7_20500001	chrX_20500001	SF428_1-HE
2634	chrX	20940705	20940735	chrX	20942188	20942230	hobo	8	1493	4.0	2.0	3.0	2.0	1525	chrX	20940705	intergenic	not near genes	chrX	20941468	intergenic	not near genes	chrX	20942230	intergenic	not near genes	chrX_8_20940001	chrX_20940001	SF428_1-HE
2655	chrX	21458677	21458703	chrX	21464139	21464165	Ivk	8	5461	5.0	6.0	5.5	1.2	5488	chrX	21458677	intergenic	not near genes	chrX	21461421	intergenic	not near genes	chrX	21464165	intergenic	not near genes	chrX_8_21460001	chrX_21460001	SF428_1-HE
2657	chrX	21474384	21474420	chrX	21474776	21474812	1731	8	392	2.0	4.0	3.0	2.0	428	chrX	21474384	intergenic	not near genes	chrX	21474598	intergenic	not near genes	chrX	21474812	intergenic	not near genes	chrX_8_21470001	chrX_21470001	SF428_1-HE
2669	chrX	22681459	22681516	chrX	22688943	22689000	HMS-Beagle2	7	7483	7.5	6.5	7.0	0.9	7541	chrX	22681459	intron	CR44997 +	chrX	22685230	intron	CR44997 +	chrX	22689000	intron	CR44997 +	chrX_7_22685001	chrX_22685001	SF428_1-HE
2673	chrX	22697488	22697517	chrX	22701811	22701839	Juan	10	4323	5.5	8.0	6.8	1.3	4351	chrX	22697488	intron	CR44997 +	chrX	22699664	intron	CR44997 +	chrX	22701839	intron	CR44997 +	chrX_10_22695001	chrX_22695001	SF428_1-HE
2674	chrX	22771502	22771528	chrX	22774819	22774845	297	7	3317	2.0	2.0	2.0	2.3	3343	chrX	22771502	intron	CR44997 +	chrX	22773174	intron	CR44997 +	chrX	22774845	intron	CR44997 +	chrX_7_22770001	chrX_22770001	SF428_1-HE
2676	chrX	22811977	22812001	chrX	22816776	22816800	F-element	7	4799	6.5	6.5	6.5	0.9	4823	chrX	22811977	intergenic	CG12446 -	chrX	22814388	intergenic	not near genes	chrX	22816800	intergenic	not near genes	chrX_7_22810001	chrX_22810001	SF428_1-HE
2683	chrX	22996291	22996321	chrX	23003549	23003577	roo	4	7258	2.0	1.0	1.5	1.6	7286	chrX	22996291	intron,intron	stnA -,stnB -	chrX	22999934	intron,intron	stnA -,stnB -	chrX	23003577	intron,intron	stnA -,stnB -	chrX_4_22995001	chrX_22995001	SF428_1-HE