SV#	Chr_5p	Chr_coord_5p_start	Chr_coord_5p_end	Chr_3p	Chr_coord_3p_start	Chr_coord_3p_end	repName	Reads_collapsed	avg_del_len	RefGen_3prime	Refgen_5prime	RefGen_Avg	Coverage_Ratio	size	Chr_5p	Chr_coord_5p	classification_5p	comment_5p	Chr_mid	Chr_coord_mid	classification_mid	comment_mid	Chr_3p	Chr_coord_3p	classification_3p	comment_3p	depletion_code	loci_code	libname
2	chr2L	47414	47425	chr2L	52584	52601	jockey	4	5173	57.0	32.0	44.5	0.1	5187	chr2L	47414	intron	Cda5 -	chr2L	50008	intron	Cda5 -	chr2L	52601	intron	Cda5 -	chr2L_4_50001	chr2L_50001	RG6N_1-HE
3	chr2L	47429	47482	chr2L	52581	52656	jockey	28	5167	36.0	31.5	33.8	0.8	5227	chr2L	47429	intron	Cda5 -	chr2L	50042	intron	Cda5 -	chr2L	52656	intron	Cda5 -	chr2L_28_50001	chr2L_50001	RG6N_1-HE
10	chr2L	347825	347847	chr2L	355394	355419	blood	9	7572	10.5	3.5	7.0	1.1	7594	chr2L	347825	3` UTR	Plc21C +	chr2L	351622	intron	Plc21C +	chr2L	355419	3` UTR	Plc21C +	chr2L_9_350001	chr2L_350001	RG6N_1-HE
11	chr2L	347851	347902	chr2L	355390	355473	blood	14	7566	5.5	3.5	4.5	2.5	7622	chr2L	347851	3` UTR	Plc21C +	chr2L	351662	intron	Plc21C +	chr2L	355473	3` UTR	Plc21C +	chr2L_14_350001	chr2L_350001	RG6N_1-HE
22	chr2L	686855	686920	chr2L	695963	696031	roo	5	9107	2.0	3.5	2.8	1.3	9176	chr2L	686855	intron	ds -	chr2L	691443	intron	ds -	chr2L	696031	intron	ds -	chr2L_5_690001	chr2L_690001	RG6N_1-HE
30	chr2L	770402	770471	chr2L	772254	772281	Bari1	15	1834	9.0	5.0	7.0	1.9	1879	chr2L	770402	intergenic	not near genes	chr2L	771342	intergenic	not near genes	chr2L	772281	intergenic	CR44614 +	chr2L_15_770001	chr2L_770001	RG6N_1-HE
37	chr2L	976839	976911	chr2L	984546	984618	roo	29	7706	5.0	4.0	4.5	5.3	7779	chr2L	976839	intergenic	not near genes	chr2L	980728	intergenic	not near genes	chr2L	984618	intergenic	not near genes	chr2L_29_980001	chr2L_980001	RG6N_1-HE
38	chr2L	996705	996752	chr2L	1005850	1005916	roo	5	9160	1.0	5.0	3.0	1.2	9211	chr2L	996705	intergenic	not near genes	chr2L	1001310	intergenic	not near genes	chr2L	1005916	intergenic	not near genes	chr2L_5_1000001	chr2L_1000001	RG6N_1-HE
43	chr2L	1220075	1220095	chr2L	1227610	1227632	blood	13	7535	23.0	7.5	15.2	0.8	7557	chr2L	1220075	intron	CG42329 +	chr2L	1223854	intron	CG42329 +	chr2L	1227632	intron	CG42329 +	chr2L_13_1220001	chr2L_1220001	RG6N_1-HE
44	chr2L	1220096	1220159	chr2L	1227597	1227698	blood	22	7534	8.0	4.5	6.2	3.1	7602	chr2L	1220096	intron	CG42329 +	chr2L	1223897	intron	CG42329 +	chr2L	1227698	intron	CG42329 +	chr2L_22_1220001	chr2L_1220001	RG6N_1-HE
53	chr2L	1570633	1570714	chr2L	1573575	1573641	F-element	26	2941	9.5	13.0	11.2	2.1	3008	chr2L	1570633	intron	haf +	chr2L	1572137	intron	haf +	chr2L	1573641	intron	haf +	chr2L_26_1570001	chr2L_1570001	RG6N_1-HE
58	chr2L	1678919	1678949	chr2L	1686453	1686485	blood	7	7534	21.5	14.0	17.8	0.4	7566	chr2L	1678919	intron	chinmo +	chr2L	1682702	intron	chinmo +	chr2L	1686485	intron	chinmo +	chr2L_7_1680001	chr2L_1680001	RG6N_1-HE
59	chr2L	1678951	1678982	chr2L	1686451	1686518	blood	25	7532	12.0	13.0	12.5	1.9	7567	chr2L	1678951	intron	chinmo +	chr2L	1682734	intron	chinmo +	chr2L	1686518	intron	chinmo +	chr2L_25_1680001	chr2L_1680001	RG6N_1-HE
60	chr2L	1678988	1678991	chr2L	1686519	1686527	blood	5	7533	12.0	29.5	20.8	0.2	7539	chr2L	1678988	intron	chinmo +	chr2L	1682758	intron	chinmo +	chr2L	1686527	intron	chinmo +	chr2L_5_1680001	chr2L_1680001	RG6N_1-HE
61	chr2L	1711301	1711326	chr2L	1711696	1711703	mdg3	6	390	6.0	5.0	5.5	0.9	402	chr2L	1711301	3` UTR,3` UTR	mRpL48 +,frtz -	chr2L	1711502	3` UTR	frtz -	chr2L	1711703	3` UTR	frtz -	chr2L_6_1710001	chr2L_1710001	RG6N_1-HE
62	chr2L	1711335	1711379	chr2L	1711688	1711758	mdg3	7	377	3.0	4.5	3.8	1.5	423	chr2L	1711335	3` UTR,3` UTR	mRpL48 +,frtz -	chr2L	1711546	3` UTR	frtz -	chr2L	1711758	exon	frtz -	chr2L_7_1710001	chr2L_1710001	RG6N_1-HE
85	chr2L	2100384	2100400	chr2L	2109550	2109556	roo	9	9176	12.0	13.0	12.5	0.7	9172	chr2L	2100384	intron	dpr3 -	chr2L	2104970	intron	dpr3 -	chr2L	2109556	intron	dpr3 -	chr2L_9_2100001	chr2L_2100001	RG6N_1-HE
86	chr2L	2112045	2112145	chr2L	2119778	2119817	opus	10	7704	1.5	13.0	7.2	1.2	7772	chr2L	2112045	intergenic	not near genes	chr2L	2115931	intergenic	not near genes	chr2L	2119817	intergenic	not near genes	chr2L_10_2115001	chr2L_2115001	RG6N_1-HE
119	chr2L	2661192	2661223	chr2L	2663045	2663060	I-element	8	1862	7.0	11.0	9.0	0.8	1868	chr2L	2661192	intergenic	not near genes	chr2L	2662126	intergenic	not near genes	chr2L	2663060	intergenic	not near genes	chr2L_8_2660001	chr2L_2660001	RG6N_1-HE
129	chr2L	2933231	2933313	chr2L	2935489	2935557	pogo	48	2251	13.0	18.0	15.5	2.9	2326	chr2L	2933231	intron	lilli +	chr2L	2934394	intron	lilli +	chr2L	2935557	intron	lilli +	chr2L_48_2930001	chr2L_2930001	RG6N_1-HE
130	chr2L	3072989	3073044	chr2L	3078252	3078318	copia	9	5267	9.0	10.0	9.5	0.9	5329	chr2L	3072989	intron	toc -	chr2L	3075654	intron	toc -	chr2L	3078318	intron	toc -	chr2L_9_3075001	chr2L_3075001	RG6N_1-HE
136	chr2L	3202702	3202762	chr2L	3210186	3210262	mdg1	20	7498	7.0	7.5	7.2	2.4	7560	chr2L	3202702	intergenic	not near genes	chr2L	3206482	intergenic	not near genes	chr2L	3210262	intergenic	CR45336 +	chr2L_20_3205001	chr2L_3205001	RG6N_1-HE
137	chr2L	3251474	3251495	chr2L	3259109	3259131	springer	5	7636	0.5	5.0	2.8	1.3	7657	chr2L	3251474	intergenic	not near genes	chr2L	3255302	intergenic	not near genes	chr2L	3259131	intergenic	not near genes	chr2L_5_3255001	chr2L_3255001	RG6N_1-HE
145	chr2L	3388552	3388621	chr2L	3388864	3388933	pogo	18	309	10.0	12.0	11.0	1.5	381	chr2L	3388552	intergenic	CG42460 -	chr2L	3388742	intergenic	CG42460 -	chr2L	3388933	intergenic	CR44791 +,CG42460 -	chr2L_18_3385001	chr2L_3385001	RG6N_1-HE
157	chr2L	3649720	3649797	chr2L	3654998	3655070	copia	11	5275	5.5	1.5	3.5	2.4	5350	chr2L	3649720	intron	for -	chr2L	3652395	intron	for -	chr2L	3655070	intron	for -	chr2L_11_3650001	chr2L_3650001	RG6N_1-HE
177	chr2L	4066022	4066036	chr2L	4068871	4068920	Juan	6	2880	14.0	4.5	9.2	0.6	2898	chr2L	4066022	intron	ed +	chr2L	4067471	intron	ed +	chr2L	4068920	intron	ed +	chr2L_6_4065001	chr2L_4065001	RG6N_1-HE
183	chr2L	4181300	4181305	chr2L	4183975	4183994	Burdock	4	2681	0.0	10.0	5.0	0.7	2694	chr2L	4181300	intergenic	not near genes	chr2L	4182647	intergenic	not near genes	chr2L	4183994	intergenic	not near genes	chr2L_4_4180001	chr2L_4180001	RG6N_1-HE
192	chr2L	4601641	4601730	chr2L	4609153	4609226	mdg1	29	7507	6.5	9.5	8.0	3.2	7585	chr2L	4601641	intron	dp -	chr2L	4605434	intron	dp -	chr2L	4609226	intron	dp -	chr2L_29_4605001	chr2L_4605001	RG6N_1-HE
194	chr2L	4661779	4661843	chr2L	4669428	4669494	opus	10	7644	5.0	6.5	5.8	1.5	7715	chr2L	4661779	intergenic	not near genes	chr2L	4665636	intergenic	not near genes	chr2L	4669494	intergenic	not near genes	chr2L_10_4665001	chr2L_4665001	RG6N_1-HE
203	chr2L	4918144	4918200	chr2L	4923324	4923382	jockey	11	5182	1.0	1.5	1.2	5.0	5238	chr2L	4918144	intron	hoe1 -	chr2L	4920763	intron	hoe1 -	chr2L	4923382	intron	hoe1 -	chr2L_11_4920001	chr2L_4920001	RG6N_1-HE
212	chr2L	5342759	5342793	chr2L	5345173	5345201	Doc	7	2413	0.0	12.0	6.0	1.0	2442	chr2L	5342759	intergenic	not near genes	chr2L	5343980	intergenic	not near genes	chr2L	5345201	intergenic	not near genes	chr2L_7_5340001	chr2L_5340001	RG6N_1-HE
236	chr2L	5827653	5827724	chr2L	5836732	5836803	roo	30	9074	11.5	11.5	11.5	2.4	9150	chr2L	5827653	intron	TrissinR +	chr2L	5832228	intron	TrissinR +	chr2L	5836803	intron	TrissinR +	chr2L_30_5830001	chr2L_5830001	RG6N_1-HE
237	chr2L	5827727	5827731	chr2L	5836730	5836804	roo	6	9063	10.0	11.0	10.5	0.5	9077	chr2L	5827727	intron	TrissinR +	chr2L	5832266	intron	TrissinR +	chr2L	5836804	intron	TrissinR +	chr2L_6_5830001	chr2L_5830001	RG6N_1-HE
257	chr2L	6363093	6363166	chr2L	6366084	6366121	Burdock	11	2987	4.5	2.5	3.5	2.4	3028	chr2L	6363093	intergenic	not near genes	chr2L	6364607	intergenic	not near genes	chr2L	6366121	intergenic	not near genes	chr2L_11_6360001	chr2L_6360001	RG6N_1-HE
258	chr2L	6426799	6426874	chr2L	6445130	6445202	roo	20	18328	6.5	9.0	7.8	2.3	18403	chr2L	6426799	3` UTR	CG9527 -	chr2L	6436000	intron	CG9527 -	chr2L	6445202	exon	CG9527 -	chr2L_20_6435001	chr2L_6435001	RG6N_1-HE
284	chr2L	6876767	6876785	chr2L	6882976	6883019	diver	10	6226	16.0	7.5	11.8	0.8	6252	chr2L	6876767	intron	Nlg2 +	chr2L	6879893	intron	Nlg2 +	chr2L	6883019	intron	Nlg2 +	chr2L_10_6875001	chr2L_6875001	RG6N_1-HE
285	chr2L	6876787	6876796	chr2L	6882970	6883047	diver	4	6208	14.0	6.5	10.2	0.4	6260	chr2L	6876787	intron	Nlg2 +	chr2L	6879917	intron	Nlg2 +	chr2L	6883047	intron	Nlg2 +	chr2L_4_6875001	chr2L_6875001	RG6N_1-HE
302	chr2L	7343269	7343282	chr2L	7350456	7350466	roo	7	7185	32.5	21.5	27.0	0.2	7197	chr2L	7343269	intron	Wnt6 +	chr2L	7346868	intron	Wnt6 +	chr2L	7350466	intron	Wnt6 +	chr2L_7_7345001	chr2L_7345001	RG6N_1-HE
303	chr2L	7343284	7343354	chr2L	7350452	7350477	roo	32	7173	13.0	19.5	16.2	1.9	7193	chr2L	7343284	intron	Wnt6 +	chr2L	7346880	intron	Wnt6 +	chr2L	7350477	intron	Wnt6 +	chr2L_32_7345001	chr2L_7345001	RG6N_1-HE
313	chr2L	7548043	7548087	chr2L	7550554	7550591	Burdock	4	2504	9.0	13.5	11.2	0.3	2548	chr2L	7548043	intron	RapGAP1 -	chr2L	7549317	intron	RapGAP1 -	chr2L	7550591	intron	RapGAP1 -	chr2L_4_7545001	chr2L_7545001	RG6N_1-HE
315	chr2L	7579136	7579164	chr2L	7579398	7579426	BS	5	262	7.0	0.0	3.5	1.1	290	chr2L	7579136	intergenic	RapGAP1 -	chr2L	7579281	intergenic	RapGAP1 -	chr2L	7579426	intergenic	RapGAP1 -	chr2L_5_7575001	chr2L_7575001	RG6N_1-HE
333	chr2L	7958991	7959060	chr2L	7960473	7960528	pogo	12	1477	7.0	8.0	7.5	1.4	1537	chr2L	7958991	intron	Snoo -	chr2L	7959760	intron	Snoo -	chr2L	7960528	intron	Snoo -	chr2L_12_7955001	chr2L_7955001	RG6N_1-HE
334	chr2L	7977039	7977078	chr2L	7984084	7984112	297	4	7042	9.5	11.0	10.2	0.4	7073	chr2L	7977039	intron	Snoo -	chr2L	7980576	intron	Snoo -	chr2L	7984112	intron,5` UTR	Snoo -,CG7231 +	chr2L_4_7980001	chr2L_7980001	RG6N_1-HE
335	chr2L	7977079	7977099	chr2L	7984065	7984114	297	4	7011	8.0	9.5	8.8	0.4	7035	chr2L	7977079	intron	Snoo -	chr2L	7980596	intron	Snoo -	chr2L	7984114	intron,5` UTR	Snoo -,CG7231 +	chr2L_4_7980001	chr2L_7980001	RG6N_1-HE
337	chr2L	8013592	8013623	chr2L	8023599	8023630	copia	4	10006	3.5	5.0	4.2	0.8	10038	chr2L	8013592	intron	Tg +	chr2L	8018611	intron	Tg +	chr2L	8023630	intron	Tg +	chr2L_4_8015001	chr2L_8015001	RG6N_1-HE
339	chr2L	8051653	8051688	chr2L	8051849	8051852	INE-1	7	188	7.0	6.0	6.5	0.9	199	chr2L	8051653	exon	CG7466 +	chr2L	8051752	intron	CG7466 +	chr2L	8051852	intron	CG7466 +	chr2L_7_8050001	chr2L_8050001	RG6N_1-HE
348	chr2L	8452358	8452435	chr2L	8461600	8461610	roo	26	9236	9.5	9.5	9.5	2.5	9252	chr2L	8452358	intron	fu12 -	chr2L	8456984	intron	fu12 -	chr2L	8461610	intron	fu12 -	chr2L_26_8455001	chr2L_8455001	RG6N_1-HE
363	chr2L	8723067	8723138	chr2L	8731503	8731578	Tirant	29	8441	13.0	10.5	11.8	2.3	8511	chr2L	8723067	intron	raw -	chr2L	8727322	intron	raw -	chr2L	8731578	intron	raw -	chr2L_29_8725001	chr2L_8725001	RG6N_1-HE
373	chr2L	9000220	9000310	chr2L	9007801	9007898	roo	20	7579	7.0	3.0	5.0	3.3	7678	chr2L	9000220	intergenic	Try29F +	chr2L	9004059	intergenic	not near genes	chr2L	9007898	intergenic	not near genes	chr2L_20_9000001	chr2L_9000001	RG6N_1-HE
382	chr2L	9217925	9218004	chr2L	9222783	9222870	Doc	19	4862	3.0	0.5	1.8	6.8	4945	chr2L	9217925	intron	tai +	chr2L	9220398	intron	tai +	chr2L	9222870	intron	tai +	chr2L_19_9220001	chr2L_9220001	RG6N_1-HE
387	chr2L	9284503	9284587	chr2L	9284666	9284751	INE-1	25	163	3.5	7.0	5.2	4.0	248	chr2L	9284503	intron	Ggamma30A +	chr2L	9284627	intron	Ggamma30A +	chr2L	9284751	intron	Ggamma30A +	chr2L_25_9280001	chr2L_9280001	RG6N_1-HE
396	chr2L	9393438	9393467	chr2L	9396473	9396505	jockey	13	3035	22.0	14.5	18.2	0.7	3067	chr2L	9393438	intron	Shawl -	chr2L	9394972	intron	Shawl -	chr2L	9396505	intron	Shawl -	chr2L_13_9390001	chr2L_9390001	RG6N_1-HE
397	chr2L	9393469	9393519	chr2L	9396466	9396541	jockey	25	3033	10.0	14.0	12.0	1.9	3072	chr2L	9393469	intron	Shawl -	chr2L	9395005	intron	Shawl -	chr2L	9396541	intron	Shawl -	chr2L_25_9390001	chr2L_9390001	RG6N_1-HE
417	chr2L	9973668	9973741	chr2L	9980849	9980931	HMS-Beagle	22	7180	3.5	9.5	6.5	2.9	7263	chr2L	9973668	intergenic	not near genes	chr2L	9977300	intergenic	not near genes	chr2L	9980931	intergenic	not near genes	chr2L_22_9975001	chr2L_9975001	RG6N_1-HE
427	chr2L	10138131	10138185	chr2L	10143440	10143500	Rt1c	11	5309	6.5	11.0	8.8	1.1	5369	chr2L	10138131	intron	CG44153 -	chr2L	10140816	intron	CG44153 -	chr2L	10143500	intron	CG44153 -	chr2L_11_10140001	chr2L_10140001	RG6N_1-HE
430	chr2L	10156264	10156285	chr2L	10163802	10163826	blood	8	7538	15.5	2.5	9.0	0.8	7562	chr2L	10156264	intron,3` UTR	CG44153 -,CG4839 +	chr2L	10160045	intron	CG44153 -	chr2L	10163826	intron	CG44153 -	chr2L_8_10160001	chr2L_10160001	RG6N_1-HE
431	chr2L	10156290	10156352	chr2L	10163799	10163872	blood	15	7523	9.5	2.0	5.8	2.2	7582	chr2L	10156290	intron,3` UTR	CG44153 -,CG4839 +	chr2L	10160081	intron	CG44153 -	chr2L	10163872	intron	CG44153 -	chr2L_15_10160001	chr2L_10160001	RG6N_1-HE
450	chr2L	10592788	10592855	chr2L	10600511	10600579	opus	13	7731	10.5	8.5	9.5	1.2	7791	chr2L	10592788	intron	Trim9 +	chr2L	10596684	intron	Trim9 +	chr2L	10600579	intron	Trim9 +	chr2L_13_10595001	chr2L_10595001	RG6N_1-HE
460	chr2L	10862784	10862869	chr2L	10864463	10864497	Rt1c	14	1674	5.0	2.0	3.5	3.1	1713	chr2L	10862784	intron	CR43807 -	chr2L	10863640	intron	CR43807 -	chr2L	10864497	3` UTR	CR43807 -	chr2L_14_10860001	chr2L_10860001	RG6N_1-HE
466	chr2L	10946909	10946965	chr2L	10956167	10956235	roo	23	9272	11.0	10.5	10.8	1.9	9326	chr2L	10946909	intron	dpr2 -	chr2L	10951572	intron	dpr2 -	chr2L	10956235	intron	dpr2 -	chr2L_23_10950001	chr2L_10950001	RG6N_1-HE
479	chr2L	11215086	11215094	chr2L	11218747	11218755	Doc	9	3661	0.0	10.5	5.2	1.5	3669	chr2L	11215086	intron	ab +	chr2L	11216920	intron	ab +	chr2L	11218755	intron	ab +	chr2L_9_11215001	chr2L_11215001	RG6N_1-HE
483	chr2L	11315198	11315258	chr2L	11317673	11317731	G2	15	2468	12.0	3.0	7.5	1.8	2533	chr2L	11315198	intergenic	not near genes	chr2L	11316464	intergenic	not near genes	chr2L	11317731	intergenic	not near genes	chr2L_15_11315001	chr2L_11315001	RG6N_1-HE
493	chr2L	11540523	11540605	chr2L	11547995	11548075	Tabor	16	7472	5.5	7.0	6.2	2.2	7552	chr2L	11540523	intergenic	not near genes	chr2L	11544299	intergenic	not near genes	chr2L	11548075	intergenic	not near genes	chr2L_16_11540001	chr2L_11540001	RG6N_1-HE
494	chr2L	11563587	11563655	chr2L	11568851	11568921	copia	23	5271	9.0	6.5	7.8	2.6	5334	chr2L	11563587	intergenic	not near genes	chr2L	11566254	intergenic	not near genes	chr2L	11568921	intergenic	not near genes	chr2L_23_11565001	chr2L_11565001	RG6N_1-HE
496	chr2L	11614020	11614085	chr2L	11615545	11615590	hopper2	7	1529	4.5	8.5	6.5	0.9	1570	chr2L	11614020	intron	kek2 +	chr2L	11614805	intron	kek2 +	chr2L	11615590	intron	kek2 +	chr2L_7_11610001	chr2L_11610001	RG6N_1-HE
502	chr2L	11713458	11713528	chr2L	11720985	11721044	blood	27	7530	9.0	8.0	8.5	2.8	7586	chr2L	11713458	intergenic	not near genes	chr2L	11717251	intergenic	not near genes	chr2L	11721044	intergenic	CR44143 +	chr2L_27_11715001	chr2L_11715001	RG6N_1-HE
515	chr2L	12067267	12067344	chr2L	12074389	12074467	297	12	7121	9.0	7.0	8.0	1.3	7200	chr2L	12067267	intergenic	CG14946 -	chr2L	12070867	intergenic	not near genes	chr2L	12074467	intergenic	not near genes	chr2L_12_12070001	chr2L_12070001	RG6N_1-HE
535	chr2L	12558265	12558340	chr2L	12565453	12565540	HMS-Beagle	14	7198	5.0	5.0	5.0	2.3	7275	chr2L	12558265	intergenic	not near genes	chr2L	12561902	intergenic	not near genes	chr2L	12565540	intergenic	not near genes	chr2L_14_12560001	chr2L_12560001	RG6N_1-HE
546	chr2L	12728869	12728920	chr2L	12729180	12729231	pogo	14	307	18.0	17.5	17.8	0.7	362	chr2L	12728869	intron	MRP +	chr2L	12729050	intron	MRP +	chr2L	12729231	exon	MRP +	chr2L_14_12725001	chr2L_12725001	RG6N_1-HE
547	chr2L	12728924	12728946	chr2L	12729165	12729236	pogo	17	297	14.0	15.5	14.8	1.1	312	chr2L	12728924	intron	MRP +	chr2L	12729080	intron	MRP +	chr2L	12729236	exon	MRP +	chr2L_17_12725001	chr2L_12725001	RG6N_1-HE
548	chr2L	12731010	12731022	chr2L	12735847	12735860	F-element	6	4838	20.5	7.5	14.0	0.4	4850	chr2L	12731010	intron	MRP +	chr2L	12733435	intron	MRP +	chr2L	12735860	intron	MRP +	chr2L_6_12730001	chr2L_12730001	RG6N_1-HE
549	chr2L	12731029	12731086	chr2L	12735834	12735912	F-element	24	4831	9.0	6.5	7.8	2.7	4883	chr2L	12731029	intron	MRP +	chr2L	12733470	intron	MRP +	chr2L	12735912	intron	MRP +	chr2L_24_12730001	chr2L_12730001	RG6N_1-HE
550	chr2L	12739128	12739198	chr2L	12743958	12744039	Doc	16	4847	4.0	9.5	6.8	2.1	4911	chr2L	12739128	exon	MRP +	chr2L	12741584	intron	MRP +	chr2L	12744039	exon	MRP +	chr2L_16_12740001	chr2L_12740001	RG6N_1-HE
551	chr2L	12763767	12763811	chr2L	12764050	12764093	BS	23	281	9.0	0.0	4.5	4.2	326	chr2L	12763767	intergenic	not near genes	chr2L	12763930	intergenic	not near genes	chr2L	12764093	intergenic	not near genes	chr2L_23_12760001	chr2L_12760001	RG6N_1-HE
552	chr2L	12781742	12781812	chr2L	12789262	12789325	Quasimodo	29	7517	38.0	20.0	29.0	1.0	7583	chr2L	12781742	intergenic	not near genes	chr2L	12785534	intergenic	not near genes	chr2L	12789325	intergenic	not near genes	chr2L_29_12785001	chr2L_12785001	RG6N_1-HE
553	chr2L	12791564	12791609	chr2L	12795310	12795333	F-element	43	3741	0.0	21.0	10.5	3.7	3769	chr2L	12791564	intergenic	not near genes	chr2L	12793448	intergenic	not near genes	chr2L	12795333	intergenic	not near genes	chr2L_43_12790001	chr2L_12790001	RG6N_1-HE
554	chr2L	12791610	12791620	chr2L	12795309	12795330	F-element	7	3730	0.0	20.5	10.2	0.6	3720	chr2L	12791610	intergenic	not near genes	chr2L	12793470	intergenic	not near genes	chr2L	12795330	intergenic	not near genes	chr2L_7_12790001	chr2L_12790001	RG6N_1-HE
558	chr2L	12861649	12861703	chr2L	12863175	12863221	hobo	18	1525	10.0	5.5	7.8	2.0	1572	chr2L	12861649	intergenic	not near genes	chr2L	12862435	intergenic	not near genes	chr2L	12863221	intergenic	not near genes	chr2L_18_12860001	chr2L_12860001	RG6N_1-HE
559	chr2L	12893973	12894042	chr2L	12895494	12895537	hobo	15	1521	9.0	11.5	10.2	1.3	1564	chr2L	12893973	intergenic	not near genes	chr2L	12894755	intergenic	not near genes	chr2L	12895537	intergenic	not near genes	chr2L_15_12890001	chr2L_12890001	RG6N_1-HE
560	chr2L	12933800	12933871	chr2L	12941322	12941401	blood	34	7531	12.0	7.5	9.8	3.1	7601	chr2L	12933800	intergenic	not near genes	chr2L	12937600	intergenic	not near genes	chr2L	12941401	intergenic	not near genes	chr2L_34_12935001	chr2L_12935001	RG6N_1-HE
561	chr2L	13036188	13036261	chr2L	13036499	13036575	X-element	19	314	12.5	9.5	11.0	1.6	387	chr2L	13036188	intron	CG9932 -	chr2L	13036382	intron	CG9932 -	chr2L	13036575	intron	CG9932 -	chr2L_19_13035001	chr2L_13035001	RG6N_1-HE
579	chr2L	13405600	13405638	chr2L	13410458	13410506	Doc	8	4864	9.0	8.0	8.5	0.8	4906	chr2L	13405600	exon	CG7110 +	chr2L	13408053	intron	CG7110 +	chr2L	13410506	intron	CG7110 +	chr2L_8_13405001	chr2L_13405001	RG6N_1-HE
580	chr2L	13405658	13405661	chr2L	13410455	13410514	Doc	4	4846	8.0	8.0	8.0	0.4	4856	chr2L	13405658	exon	CG7110 +	chr2L	13408086	intron	CG7110 +	chr2L	13410514	exon	CG7110 +	chr2L_4_13405001	chr2L_13405001	RG6N_1-HE
582	chr2L	13449417	13449489	chr2L	13456924	13456995	Quasimodo	14	7503	5.5	14.0	9.8	1.3	7578	chr2L	13449417	intron,intron	CG42784 +,Hsp60D -	chr2L	13453206	intron	CG42784 +	chr2L	13456995	intron	CG42784 +	chr2L_14_13450001	chr2L_13450001	RG6N_1-HE
583	chr2L	13481400	13481456	chr2L	13482071	13482116	jockey	24	672	27.0	32.0	29.5	0.8	716	chr2L	13481400	intron	CG42784 +	chr2L	13481758	intron	CG42784 +	chr2L	13482116	intron	CG42784 +	chr2L_24_13480001	chr2L_13480001	RG6N_1-HE
585	chr2L	13522241	13522284	chr2L	13527613	13527648	Transpac	9	5361	0.0	13.0	6.5	1.2	5407	chr2L	13522241	intron	B4 -	chr2L	13524944	intron	B4 -	chr2L	13527648	intron	B4 -	chr2L_9_13520001	chr2L_13520001	RG6N_1-HE
588	chr2L	13560338	13560403	chr2L	13565230	13565294	F-element	24	4891	10.5	9.0	9.8	2.2	4956	chr2L	13560338	intron	kuz +	chr2L	13562816	intron	kuz +	chr2L	13565294	intron	kuz +	chr2L_24_13560001	chr2L_13560001	RG6N_1-HE
600	chr2L	13761757	13761816	chr2L	13762939	13762998	Doc	21	1177	8.0	6.0	7.0	2.6	1241	chr2L	13761757	intron	TM9SF4 +	chr2L	13762378	intron	TM9SF4 +	chr2L	13762998	intron	TM9SF4 +	chr2L_21_13760001	chr2L_13760001	RG6N_1-HE
603	chr2L	13853031	13853112	chr2L	13862252	13862327	roo	39	9218	13.5	0.0	6.8	5.0	9296	chr2L	13853031	intron	CenG1A +	chr2L	13857679	intron	CenG1A +	chr2L	13862327	intron	CenG1A +	chr2L_39_13855001	chr2L_13855001	RG6N_1-HE
633	chr2L	14618850	14618872	chr2L	14619302	14619322	jockey	13	450	17.5	11.5	14.5	0.8	472	chr2L	14618850	intron,3` UTR,3` UTR	osp -,Adh +,Adhr +	chr2L	14619086	intron	osp -	chr2L	14619322	intron	osp -	chr2L_13_14615001	chr2L_14615001	RG6N_1-HE
634	chr2L	14618875	14618887	chr2L	14619301	14619331	jockey	8	446	15.0	11.5	13.2	0.6	456	chr2L	14618875	intron,3` UTR,3` UTR	osp -,Adh +,Adhr +	chr2L	14619103	intron	osp -	chr2L	14619331	intron	osp -	chr2L_8_14615001	chr2L_14615001	RG6N_1-HE
641	chr2L	14803827	14803841	chr2L	14809101	14809115	copia	5	5274	16.0	11.0	13.5	0.3	5288	chr2L	14803827	intergenic	not near genes	chr2L	14806471	intergenic	not near genes	chr2L	14809115	intergenic	not near genes	chr2L_5_14805001	chr2L_14805001	RG6N_1-HE
642	chr2L	14803846	14803863	chr2L	14809088	14809137	copia	11	5261	13.0	9.0	11.0	0.9	5291	chr2L	14803846	intergenic	not near genes	chr2L	14806492	intergenic	not near genes	chr2L	14809137	intergenic	not near genes	chr2L_11_14805001	chr2L_14805001	RG6N_1-HE
643	chr2L	14803866	14803908	chr2L	14809087	14809165	copia	12	5260	4.5	9.0	6.8	1.5	5299	chr2L	14803866	intergenic	not near genes	chr2L	14806516	intergenic	not near genes	chr2L	14809165	intergenic	not near genes	chr2L_12_14805001	chr2L_14805001	RG6N_1-HE
646	chr2L	14889892	14889979	chr2L	14890388	14890474	jockey	43	493	10.0	12.5	11.2	3.5	582	chr2L	14889892	intergenic	not near genes	chr2L	14890183	intergenic	not near genes	chr2L	14890474	intergenic	not near genes	chr2L_43_14890001	chr2L_14890001	RG6N_1-HE
654	chr2L	14984337	14984394	chr2L	14991987	14992065	opus	15	7660	6.0	5.0	5.5	2.3	7728	chr2L	14984337	intron	mol -	chr2L	14988201	intron	mol -	chr2L	14992065	intron	mol -	chr2L_15_14985001	chr2L_14985001	RG6N_1-HE
670	chr2L	15197482	15197508	chr2L	15197649	15197674	INE-1	10	165	1.0	15.0	8.0	1.1	192	chr2L	15197482	intron	CG4168 -	chr2L	15197578	intron	CG4168 -	chr2L	15197674	intron	CG4168 -	chr2L_10_15195001	chr2L_15195001	RG6N_1-HE
684	chr2L	15446005	15446062	chr2L	15453523	15453570	blood	16	7531	10.5	0.5	5.5	2.5	7565	chr2L	15446005	intergenic	not near genes	chr2L	15449788	intergenic	not near genes	chr2L	15453570	intergenic	not near genes	chr2L_16_15445001	chr2L_15445001	RG6N_1-HE
693	chr2L	15586403	15586422	chr2L	15593523	15593545	297	11	7122	0.5	6.5	3.5	2.4	7142	chr2L	15586403	intergenic	not near genes	chr2L	15589974	intergenic	not near genes	chr2L	15593545	intergenic	not near genes	chr2L_11_15585001	chr2L_15585001	RG6N_1-HE
697	chr2L	15826832	15826885	chr2L	15829297	15829350	Tabor	19	2464	8.0	13.5	10.8	1.6	2518	chr2L	15826832	intergenic	not near genes	chr2L	15828091	intergenic	not near genes	chr2L	15829350	intergenic	not near genes	chr2L_19_15825001	chr2L_15825001	RG6N_1-HE
701	chr2L	15955968	15956042	chr2L	15957506	15957569	hobo	21	1536	8.0	11.0	9.5	2.0	1601	chr2L	15955968	intron	beat-Ib -	chr2L	15956768	intron	beat-Ib -	chr2L	15957569	intron	beat-Ib -	chr2L_21_15955001	chr2L_15955001	RG6N_1-HE
712	chr2L	16141123	16141193	chr2L	16146379	16146466	copia	27	5280	11.5	9.5	10.5	2.3	5343	chr2L	16141123	intergenic	not near genes	chr2L	16143794	intergenic	not near genes	chr2L	16146466	intergenic	not near genes	chr2L_27_16140001	chr2L_16140001	RG6N_1-HE
713	chr2L	16153675	16153751	chr2L	16160799	16160834	297	40	7122	16.5	14.5	15.5	2.4	7159	chr2L	16153675	intergenic	not near genes	chr2L	16157254	intergenic	not near genes	chr2L	16160834	intergenic	not near genes	chr2L_40_16155001	chr2L_16155001	RG6N_1-HE
721	chr2L	16280241	16280285	chr2L	16281436	16281490	1360	12	1218	9.0	10.0	9.5	1.1	1249	chr2L	16280241	intron	crp -	chr2L	16280866	intron	crp -	chr2L	16281490	intron	crp -	chr2L_12_16280001	chr2L_16280001	RG6N_1-HE
738	chr2L	16511901	16511950	chr2L	16519085	16519129	HMS-Beagle	21	7184	9.5	8.0	8.8	2.1	7228	chr2L	16511901	intron	CG5953 -	chr2L	16515515	intron	CG5953 -	chr2L	16519129	intron	CG5953 -	chr2L_21_16515001	chr2L_16515001	RG6N_1-HE
752	chr2L	16958044	16958121	chr2L	16962903	16962980	Doc	35	4857	14.0	14.5	14.2	2.3	4936	chr2L	16958044	intergenic	not near genes	chr2L	16960512	intergenic	not near genes	chr2L	16962980	intergenic	not near genes	chr2L_35_16960001	chr2L_16960001	RG6N_1-HE
767	chr2L	17144288	17144309	chr2L	17152026	17152048	opus	7	7738	9.0	9.5	9.2	0.7	7760	chr2L	17144288	intron,intron	CG34106 +,beat-IIIa +	chr2L	17148168	intron,intron	CG34106 +,beat-IIIa +	chr2L	17152048	intron,intron	CG34106 +,beat-IIIa +	chr2L_7_17145001	chr2L_17145001	RG6N_1-HE
769	chr2L	17167500	17167584	chr2L	17167812	17167895	pogo	36	309	11.0	13.0	12.0	2.8	395	chr2L	17167500	intron,intron	CG34106 +,beat-IIIa +	chr2L	17167698	intron,intron	CG34106 +,beat-IIIa +	chr2L	17167895	intron,intron	CG34106 +,beat-IIIa +	chr2L_36_17165001	chr2L_17165001	RG6N_1-HE
772	chr2L	17199089	17199142	chr2L	17200633	17200684	hobo	14	1542	15.5	3.5	9.5	1.3	1595	chr2L	17199089	intron	beat-IIIc -	chr2L	17199886	intron	beat-IIIc -	chr2L	17200684	intron	beat-IIIc -	chr2L_14_17195001	chr2L_17195001	RG6N_1-HE
777	chr2L	17273139	17273229	chr2L	17277993	17278026	F-element	10	4841	2.0	0.5	1.2	4.5	4887	chr2L	17273139	intergenic	not near genes	chr2L	17275582	intergenic	not near genes	chr2L	17278026	intergenic	not near genes	chr2L_10_17275001	chr2L_17275001	RG6N_1-HE
783	chr2L	17335489	17335573	chr2L	17336726	17336749	1360	20	1233	7.0	12.0	9.5	1.9	1260	chr2L	17335489	intergenic	not near genes	chr2L	17336119	intergenic	not near genes	chr2L	17336749	intergenic	not near genes	chr2L_20_17335001	chr2L_17335001	RG6N_1-HE
791	chr2L	17431942	17432021	chr2L	17432120	17432199	1360	5	178	0.0	3.5	1.8	1.8	257	chr2L	17431942	intron	Dif -	chr2L	17432070	intron	Dif -	chr2L	17432199	intron	Dif -	chr2L_5_17430001	chr2L_17430001	RG6N_1-HE
801	chr2L	17687451	17687521	chr2L	17692267	17692336	F-element	42	4814	13.0	14.0	13.5	2.9	4885	chr2L	17687451	intron	CadN -	chr2L	17689894	intron	CadN -	chr2L	17692336	intron	CadN -	chr2L_42_17685001	chr2L_17685001	RG6N_1-HE
807	chr2L	17727798	17727878	chr2L	17729336	17729350	hobo	42	1525	11.0	13.0	12.0	3.2	1552	chr2L	17727798	intron	CadN -	chr2L	17728574	intron	CadN -	chr2L	17729350	intron	CadN -	chr2L_42_17725001	chr2L_17725001	RG6N_1-HE
810	chr2L	17819859	17819872	chr2L	17825134	17825147	copia	7	5274	18.0	7.0	12.5	0.5	5288	chr2L	17819859	intron	CadN2 -	chr2L	17822503	intron	CadN2 -	chr2L	17825147	intron	CadN2 -	chr2L_7_17820001	chr2L_17820001	RG6N_1-HE
811	chr2L	17819873	17819944	chr2L	17825133	17825219	copia	17	5269	7.5	7.0	7.2	2.1	5346	chr2L	17819873	intron	CadN2 -	chr2L	17822546	intron	CadN2 -	chr2L	17825219	intron	CadN2 -	chr2L_17_17820001	chr2L_17820001	RG6N_1-HE
817	chr2L	17911910	17911925	chr2L	17914147	17914174	pogo	7	2243	13.5	9.0	11.2	0.6	2264	chr2L	17911910	intergenic	not near genes	chr2L	17913042	intergenic	not near genes	chr2L	17914174	intergenic	CG43271 -	chr2L_7_17910001	chr2L_17910001	RG6N_1-HE
818	chr2L	17911926	17911979	chr2L	17914144	17914219	pogo	19	2244	6.0	9.0	7.5	2.2	2293	chr2L	17911926	intergenic	not near genes	chr2L	17913072	intergenic	not near genes	chr2L	17914219	intergenic	CG43271 -	chr2L_19_17910001	chr2L_17910001	RG6N_1-HE
820	chr2L	17951908	17951962	chr2L	17953430	17953494	hobo	13	1536	3.5	6.5	5.0	2.2	1586	chr2L	17951908	intergenic	CR44398 -,CR44397 -	chr2L	17952701	intergenic	not near genes	chr2L	17953494	intergenic	not near genes	chr2L_13_17950001	chr2L_17950001	RG6N_1-HE
823	chr2L	18051816	18051896	chr2L	18061033	18061098	roo	33	9210	8.5	5.0	6.8	4.2	9282	chr2L	18051816	intron	rdo +	chr2L	18056457	intron	rdo +	chr2L	18061098	intron	rdo +	chr2L_33_18055001	chr2L_18055001	RG6N_1-HE
836	chr2L	18407970	18408055	chr2L	18412825	18412918	Doc	11	4859	7.5	0.0	3.8	2.3	4948	chr2L	18407970	intergenic	not near genes	chr2L	18410444	intergenic	not near genes	chr2L	18412918	intergenic	not near genes	chr2L_11_18410001	chr2L_18410001	RG6N_1-HE
868	chr2L	19147318	19147389	chr2L	19154418	19154488	297	21	7101	10.0	11.5	10.8	1.8	7170	chr2L	19147318	intron	brat +	chr2L	19150903	intron	brat +	chr2L	19154488	intron	brat +	chr2L_21_19150001	chr2L_19150001	RG6N_1-HE
879	chr2L	19344971	19345025	chr2L	19357251	19357298	blood	4	12278	5.0	2.5	3.8	0.8	12327	chr2L	19344971	intron	dnt -	chr2L	19351134	intron	dnt -	chr2L	19357298	intron	dnt -	chr2L_4_19350001	chr2L_19350001	RG6N_1-HE
891	chr2L	19620038	19620048	chr2L	19621096	19621103	jockey	4	1058	50.5	20.0	35.2	0.1	1065	chr2L	19620038	intron	Lar +	chr2L	19620570	intron	Lar +	chr2L	19621103	intron	Lar +	chr2L_4_19620001	chr2L_19620001	RG6N_1-HE
892	chr2L	19620055	19620073	chr2L	19621091	19621128	jockey	9	1039	45.0	15.5	30.2	0.3	1073	chr2L	19620055	intron	Lar +	chr2L	19620592	intron	Lar +	chr2L	19621128	intron	Lar +	chr2L_9_19620001	chr2L_19620001	RG6N_1-HE
893	chr2L	19620074	19620108	chr2L	19621086	19621137	jockey	11	1043	39.0	13.0	26.0	0.4	1063	chr2L	19620074	intron	Lar +	chr2L	19620606	intron	Lar +	chr2L	19621137	intron	Lar +	chr2L_11_19620001	chr2L_19620001	RG6N_1-HE
895	chr2L	19652504	19652595	chr2L	19674011	19674098	opus	27	21504	10.0	7.0	8.5	2.8	21594	chr2L	19652504	intron	Lar +	chr2L	19663301	intron	Lar +	chr2L	19674098	intron	Lar +	chr2L_27_19660001	chr2L_19660001	RG6N_1-HE
896	chr2L	19703481	19703504	chr2L	19712688	19712710	roo	16	9205	38.5	13.0	25.8	0.6	9229	chr2L	19703481	intron	Lar +	chr2L	19708096	intron	Lar +	chr2L	19712710	intron	Lar +	chr2L_16_19705001	chr2L_19705001	RG6N_1-HE
897	chr2L	19703506	19703561	chr2L	19712682	19712757	roo	39	9198	20.5	13.0	16.8	2.2	9251	chr2L	19703506	intron	Lar +	chr2L	19708132	intron	Lar +	chr2L	19712757	intron	Lar +	chr2L_39_19705001	chr2L_19705001	RG6N_1-HE
899	chr2L	19737348	19737383	chr2L	19740826	19740887	1360	16	3509	4.0	7.0	5.5	2.5	3539	chr2L	19737348	intergenic	Nf-YB +	chr2L	19739118	intergenic	not near genes	chr2L	19740887	intergenic	not near genes	chr2L_16_19735001	chr2L_19735001	RG6N_1-HE
900	chr2L	19762748	19762825	chr2L	19763055	19763138	pogo	7	305	8.0	3.5	5.8	1.0	390	chr2L	19762748	exon	fbp -	chr2L	19762943	intron	fbp -	chr2L	19763138	intron	fbp -	chr2L_7_19760001	chr2L_19760001	RG6N_1-HE
913	chr2L	20005811	20005893	chr2L	20010958	20011040	flea	18	5144	7.5	8.0	7.8	2.0	5229	chr2L	20005811	intron	CG43861 -	chr2L	20008426	intron	CG43861 -	chr2L	20011040	intron	CG43861 -	chr2L_18_20005001	chr2L_20005001	RG6N_1-HE
916	chr2L	20272063	20272122	chr2L	20282845	20282904	copia	27	10780	11.0	12.5	11.8	2.1	10841	chr2L	20272063	intergenic	not near genes	chr2L	20277484	intergenic	not near genes	chr2L	20282904	intergenic	not near genes	chr2L_27_20275001	chr2L_20275001	RG6N_1-HE
922	chr2L	20303106	20303175	chr2L	20310629	20310714	blood	14	7532	2.0	6.0	4.0	2.8	7608	chr2L	20303106	intergenic	not near genes	chr2L	20306910	intergenic	not near genes	chr2L	20310714	intergenic	not near genes	chr2L_14_20305001	chr2L_20305001	RG6N_1-HE
925	chr2L	20372188	20372250	chr2L	20372487	20372555	pogo	24	303	4.5	11.5	8.0	2.7	367	chr2L	20372188	intergenic	Ugt37a1 -	chr2L	20372372	intergenic	Ugt37a1 -	chr2L	20372555	exon	Ugt37a1 -	chr2L_24_20370001	chr2L_20370001	RG6N_1-HE
931	chr2L	20568596	20568687	chr2L	20569054	20569112	X-element	31	455	6.5	7.0	6.8	4.0	516	chr2L	20568596	intron	CR45347 +	chr2L	20568854	intron	CR45347 +	chr2L	20569112	intron	CR45347 +	chr2L_31_20565001	chr2L_20565001	RG6N_1-HE
932	chr2L	20576151	20576237	chr2L	20583690	20583776	blood	22	7535	5.5	5.5	5.5	3.4	7625	chr2L	20576151	intergenic	CR45347 +	chr2L	20579964	intergenic	not near genes	chr2L	20583776	3` UTR	CR44909 -	chr2L_22_20575001	chr2L_20575001	RG6N_1-HE
937	chr2L	20835747	20835819	chr2L	20836535	20836606	Quasimodo	14	787	7.5	9.5	8.5	1.5	859	chr2L	20835747	5` UTR	Oseg5 -	chr2L	20836176	intergenic	Oseg5 -,Spn38F -	chr2L	20836606	intergenic	Spn38F -	chr2L_14_20835001	chr2L_20835001	RG6N_1-HE
941	chr2L	20891487	20891545	chr2L	20896641	20896718	jockey	16	5166	6.0	7.0	6.5	2.1	5231	chr2L	20891487	intron,intron	CG43739 -,sky -	chr2L	20894102	intron,intron	CG43739 -,sky -	chr2L	20896718	intron,intron	CG43739 -,sky -	chr2L_16_20890001	chr2L_20890001	RG6N_1-HE
942	chr2L	20901394	20901478	chr2L	20902629	20902715	1360	8	1229	9.5	2.5	6.0	1.1	1321	chr2L	20901394	intron,intron	CG43739 -,sky -	chr2L	20902054	intron,intron	CG43739 -,sky -	chr2L	20902715	intron,intron	CG43739 -,sky -	chr2L_8_20900001	chr2L_20900001	RG6N_1-HE
949	chr2L	20976599	20976616	chr2L	20981485	20981502	X-element	8	4885	11.5	9.0	10.2	0.7	4903	chr2L	20976599	intron	CG42238 -	chr2L	20979050	intron	CG42238 -	chr2L	20981502	intron	CG42238 -	chr2L_8_20975001	chr2L_20975001	RG6N_1-HE
950	chr2L	20976621	20976659	chr2L	20981483	20981545	X-element	12	4881	7.0	8.0	7.5	1.4	4924	chr2L	20976621	intron	CG42238 -	chr2L	20979083	intron	CG42238 -	chr2L	20981545	intron	CG42238 -	chr2L_12_20975001	chr2L_20975001	RG6N_1-HE
951	chr2L	21020223	21020299	chr2L	21023971	21024026	NOF	18	3734	7.5	9.0	8.2	2.0	3803	chr2L	21020223	intron	CG42238 -	chr2L	21022124	intron	CG42238 -	chr2L	21024026	intron	CG42238 -	chr2L_18_21020001	chr2L_21020001	RG6N_1-HE
953	chr2L	21041079	21041156	chr2L	21049404	21049488	Tirant	35	8325	10.0	15.5	12.8	2.5	8409	chr2L	21041079	intron	CG42238 -	chr2L	21045284	intron	CG42238 -	chr2L	21049488	intron	CG42238 -	chr2L_35_21045001	chr2L_21045001	RG6N_1-HE
960	chr2L	21337795	21337812	chr2L	21338331	21338348	BS	4	536	4.0	3.5	3.8	0.8	553	chr2L	21337795	intron	dimm +	chr2L	21338072	intron	dimm +	chr2L	21338348	intron	dimm +	chr2L_4_21335001	chr2L_21335001	RG6N_1-HE
961	chr2L	21347490	21347564	chr2L	21355033	21355107	blood	14	7543	4.0	0.5	2.2	4.4	7617	chr2L	21347490	intron	Tsp39D +	chr2L	21351298	intron	Tsp39D +	chr2L	21355107	intron	Tsp39D +	chr2L_14_21350001	chr2L_21350001	RG6N_1-HE
963	chr2L	21596961	21597052	chr2L	21604776	21604867	roo	9	7806	7.0	10.5	8.8	0.9	7906	chr2L	21596961	intergenic	not near genes	chr2L	21600914	intergenic	not near genes	chr2L	21604867	intergenic	not near genes	chr2L_9_21600001	chr2L_21600001	RG6N_1-HE
965	chr2L	21653127	21653200	chr2L	21656502	21656574	invader4	21	3374	8.5	5.0	6.8	2.7	3447	chr2L	21653127	intergenic	not near genes	chr2L	21654850	intergenic	not near genes	chr2L	21656574	intergenic	not near genes	chr2L_21_21650001	chr2L_21650001	RG6N_1-HE
967	chr2L	21872669	21872747	chr2L	21872998	21873077	INE-1	5	329	9.0	16.5	12.8	0.4	408	chr2L	21872669	intergenic	not near genes	chr2L	21872873	intergenic	not near genes	chr2L	21873077	intergenic	not near genes	chr2L_5_21870001	chr2L_21870001	RG6N_1-HE
971	chr2L	21981663	21981707	chr2L	21990857	21990907	roo	16	9221	11.0	14.5	12.8	1.2	9244	chr2L	21981663	exon	CG2528 -	chr2L	21986285	intron	CG2528 -	chr2L	21990907	exon	CG2528 -	chr2L_16_21985001	chr2L_21985001	RG6N_1-HE
982	chr2L	22258570	22258636	chr2L	22260765	22260831	G6	26	2193	10.0	23.5	16.8	1.5	2261	chr2L	22258570	intergenic	Tif-IA +	chr2L	22259700	intergenic	not near genes	chr2L	22260831	intergenic	not near genes	chr2L_26_22255001	chr2L_22255001	RG6N_1-HE
987	chr2L	22548864	22548887	chr2L	22550133	22550156	1360	14	1268	12.5	12.5	12.5	1.0	1292	chr2L	22548864	intergenic	CG17490 +	chr2L	22549510	intergenic	not near genes	chr2L	22550156	intergenic	CG17493 +	chr2L_14_22545001	chr2L_22545001	RG6N_1-HE
988	chr2L	22548889	22548928	chr2L	22550132	22550224	1360	12	1275	3.0	11.5	7.2	1.5	1335	chr2L	22548889	intergenic	CG17490 +	chr2L	22549556	intergenic	not near genes	chr2L	22550224	intergenic	CG17493 +	chr2L_12_22545001	chr2L_22545001	RG6N_1-HE
989	chr2L	22581913	22581983	chr2L	22583773	22583843	S-element	4	1858	3.5	3.5	3.5	0.9	1930	chr2L	22581913	intron	CG17494 +	chr2L	22582878	intron	CG17494 +	chr2L	22583843	intron	CG17494 +	chr2L_4_22580001	chr2L_22580001	RG6N_1-HE
992	chr2L	22679801	22679806	chr2L	22684643	22684643	F-element	6	4842	13.0	17.5	15.2	0.4	4842	chr2L	22679801	intron	CG40006 -	chr2L	22682222	intron	CG40006 -	chr2L	22684643	intron	CG40006 -	chr2L_6_22680001	chr2L_22680001	RG6N_1-HE
995	chr2L	22696604	22696613	chr2L	22696771	22696791	3S18	4	174	33.5	32.0	32.8	0.1	187	chr2L	22696604	intron	CG40006 -	chr2L	22696698	intron	CG40006 -	chr2L	22696791	intron	CG40006 -	chr2L_4_22695001	chr2L_22695001	RG6N_1-HE
998	chr2L	22776368	22776437	chr2L	22778228	22778297	S-element	10	1858	3.5	2.5	3.0	2.5	1929	chr2L	22776368	intergenic	not near genes	chr2L	22777332	intergenic	not near genes	chr2L	22778297	intergenic	not near genes	chr2L_10_22775001	chr2L_22775001	RG6N_1-HE
1003	chr2R	1516551	1516577	chr2R	1521344	1521376	1731	5	4797	5.0	2.0	3.5	1.1	4825	chr2R	1516551	exon	Maf1 -	chr2R	1518964	intron	Maf1 -	chr2R	1521376	5` UTR	Maf1 -	chr2R_5_1515001	chr2R_1515001	RG6N_1-HE
1007	chr2R	2110458	2110499	chr2R	2118074	2118128	17.6	18	7628	25.0	19.5	22.2	0.8	7670	chr2R	2110458	intron	CG17684 -	chr2R	2114293	intron	CG17684 -	chr2R	2118128	intron	CG17684 -	chr2R_18_2110001	chr2R_2110001	RG6N_1-HE
1008	chr2R	2498929	2498987	chr2R	2508141	2508205	roo	12	9217	9.5	3.0	6.2	1.7	9276	chr2R	2498929	intron	MFS17 -	chr2R	2503567	intron	MFS17 -	chr2R	2508205	intron	MFS17 -	chr2R_12_2500001	chr2R_2500001	RG6N_1-HE
1010	chr2R	2875328	2875390	chr2R	2878914	2878970	HMS-Beagle	4	3584	14.5	22.5	18.5	0.2	3642	chr2R	2875328	intergenic	not near genes	chr2R	2877149	intergenic	not near genes	chr2R	2878970	intergenic	not near genes	chr2R_4_2875001	chr2R_2875001	RG6N_1-HE
1012	chr2R	3144057	3144095	chr2R	3393406	3393442	Doc	4	249348	33.5	6.0	19.8	0.2	249385	chr2R	3144057	intron	CG42596 +	chr2R	3268750	intergenic	not near genes	chr2R	3393442	intergenic	not near genes	chr2R_4_3265001	chr2R_3265001	RG6N_1-HE
1015	chr2R	3526579	3526588	chr2R	3531380	3531386	F-element	4	4800	9.0	1.0	5.0	0.7	4807	chr2R	3526579	intergenic	not near genes	chr2R	3528982	intergenic	not near genes	chr2R	3531386	intergenic	not near genes	chr2R_4_3525001	chr2R_3525001	RG6N_1-HE
1016	chr2R	3532578	3532605	chr2R	3536092	3536119	Doc	7	3514	1.0	3.0	2.0	2.3	3541	chr2R	3532578	intergenic	not near genes	chr2R	3534348	intergenic	not near genes	chr2R	3536119	intergenic	not near genes	chr2R_7_3530001	chr2R_3530001	RG6N_1-HE
1020	chr2R	4622902	4622971	chr2R	4624126	4624201	1360	15	1225	5.0	5.0	5.0	2.5	1299	chr2R	4622902	intergenic	CR44101 -	chr2R	4623552	intergenic	not near genes	chr2R	4624201	intergenic	not near genes	chr2R_15_4620001	chr2R_4620001	RG6N_1-HE
1022	chr2R	4838840	4838855	chr2R	4840434	4840449	transib2	7	1594	30.0	26.5	28.2	0.2	1609	chr2R	4838840	intergenic	not near genes	chr2R	4839644	intergenic	not near genes	chr2R	4840449	intergenic	not near genes	chr2R_7_4835001	chr2R_4835001	RG6N_1-HE
1023	chr2R	4838856	4838899	chr2R	4840431	4840493	transib2	18	1590	14.0	26.0	20.0	0.9	1637	chr2R	4838856	intergenic	not near genes	chr2R	4839674	intergenic	not near genes	chr2R	4840493	intergenic	not near genes	chr2R_18_4835001	chr2R_4835001	RG6N_1-HE
1024	chr2R	4870674	4870686	chr2R	4871256	4871267	R1A1-element	4	581	20.0	10.5	15.2	0.2	593	chr2R	4870674	intergenic	not near genes	chr2R	4870970	intergenic	not near genes	chr2R	4871267	intergenic	not near genes	chr2R_4_4870001	chr2R_4870001	RG6N_1-HE
1025	chr2R	4870689	4870741	chr2R	4871254	4871321	R1A1-element	13	577	9.0	9.5	9.2	1.3	632	chr2R	4870689	intergenic	not near genes	chr2R	4871005	intergenic	not near genes	chr2R	4871321	intergenic	not near genes	chr2R_13_4870001	chr2R_4870001	RG6N_1-HE
1033	chr2R	5112463	5112517	chr2R	5114752	5114816	Idefix	20	2285	48.0	43.5	45.8	0.4	2353	chr2R	5112463	intergenic	not near genes	chr2R	5113640	intergenic	not near genes	chr2R	5114816	intergenic	not near genes	chr2R_20_5110001	chr2R_5110001	RG6N_1-HE
1038	chr2R	5417938	5418016	chr2R	5420641	5420693	Burdock	24	2700	4.0	9.0	6.5	3.2	2755	chr2R	5417938	intron	laccase2 +	chr2R	5419316	intron	laccase2 +	chr2R	5420693	intron	laccase2 +	chr2R_24_5415001	chr2R_5415001	RG6N_1-HE
1052	chr2R	5869223	5869252	chr2R	5874374	5874399	flea	11	5146	11.5	4.0	7.8	1.2	5176	chr2R	5869223	intergenic	not near genes	chr2R	5871811	intergenic	not near genes	chr2R	5874399	intergenic	not near genes	chr2R_11_5870001	chr2R_5870001	RG6N_1-HE
1053	chr2R	5869262	5869301	chr2R	5874373	5874452	flea	8	5143	4.5	4.0	4.2	1.5	5190	chr2R	5869262	intergenic	not near genes	chr2R	5871857	intergenic	not near genes	chr2R	5874452	intergenic	not near genes	chr2R_8_5870001	chr2R_5870001	RG6N_1-HE
1059	chr2R	5902105	5902181	chr2R	5909728	5909811	17.6	24	7628	12.0	17.5	14.8	1.5	7706	chr2R	5902105	5` UTR	CG43366 +	chr2R	5905958	intron	CG43366 +	chr2R	5909811	intron	CG43366 +	chr2R_24_5905001	chr2R_5905001	RG6N_1-HE
1067	chr2R	6096685	6096718	chr2R	6101921	6101959	BS	11	5244	25.0	9.0	17.0	0.6	5274	chr2R	6096685	intron	EcR -	chr2R	6099322	intron	EcR -	chr2R	6101959	intron	EcR -	chr2R_11_6095001	chr2R_6095001	RG6N_1-HE
1068	chr2R	6096726	6096737	chr2R	6101909	6101971	BS	5	5223	22.5	5.0	13.8	0.3	5245	chr2R	6096726	intron	EcR -	chr2R	6099348	intron	EcR -	chr2R	6101971	intron	EcR -	chr2R_5_6095001	chr2R_6095001	RG6N_1-HE
1072	chr2R	6494472	6494534	chr2R	6499305	6499340	F-element	13	4826	5.5	2.0	3.8	2.7	4868	chr2R	6494472	intergenic	not near genes	chr2R	6496906	intergenic	not near genes	chr2R	6499340	intergenic	not near genes	chr2R_13_6495001	chr2R_6495001	RG6N_1-HE
1075	chr2R	6579740	6579780	chr2R	6584884	6584937	flea	15	5153	11.5	11.0	11.2	1.2	5197	chr2R	6579740	intron	jing +	chr2R	6582338	intron	jing +	chr2R	6584937	intron	jing +	chr2R_15_6580001	chr2R_6580001	RG6N_1-HE
1089	chr2R	6952109	6952179	chr2R	6959760	6959829	opus	16	7650	5.5	5.0	5.2	2.6	7720	chr2R	6952109	intron,intron,exon	mim -,CheB42c -,ppk25 +	chr2R	6955969	intron,intron	mim -,CheB42c -	chr2R	6959829	intron,intron	mim -,CheB42c -	chr2R_16_6955001	chr2R_6955001	RG6N_1-HE
1100	chr2R	7196510	7196583	chr2R	7201356	7201429	F-element	23	4844	4.0	6.5	5.2	3.7	4919	chr2R	7196510	intron	pk +	chr2R	7198970	intron	pk +	chr2R	7201429	intron	pk +	chr2R_23_7195001	chr2R_7195001	RG6N_1-HE
1102	chr2R	7235770	7235838	chr2R	7240933	7240974	jockey	11	5149	6.0	3.0	4.5	2.0	5204	chr2R	7235770	intergenic	not near genes	chr2R	7238372	intergenic	not near genes	chr2R	7240974	intergenic	not near genes	chr2R_11_7235001	chr2R_7235001	RG6N_1-HE
1106	chr2R	7434830	7434907	chr2R	7439202	7439276	Juan	8	4371	4.0	10.5	7.2	1.0	4446	chr2R	7434830	3` UTR	so +	chr2R	7437053	intergenic	not near genes	chr2R	7439276	intergenic	not near genes	chr2R_8_7435001	chr2R_7435001	RG6N_1-HE
1109	chr2R	7608361	7608419	chr2R	7613626	7613693	I-element	16	5271	7.0	11.0	9.0	1.6	5332	chr2R	7608361	intron	CG1358 -	chr2R	7611027	intron	CG1358 -	chr2R	7613693	intron	CG1358 -	chr2R_16_7610001	chr2R_7610001	RG6N_1-HE
1118	chr2R	7815653	7815686	chr2R	7822193	7822225	Burdock	4	6540	1.0	5.5	3.2	1.0	6572	chr2R	7815653	intergenic	CG1882 +	chr2R	7818939	intergenic	not near genes	chr2R	7822225	exon	cathD -	chr2R_4_7815001	chr2R_7815001	RG6N_1-HE
1120	chr2R	7862234	7862250	chr2R	7867375	7867408	flea	5	5153	19.0	10.5	14.8	0.3	5174	chr2R	7862234	intron	Dgk -	chr2R	7864821	intron	Dgk -	chr2R	7867408	intron	Dgk -	chr2R_5_7860001	chr2R_7860001	RG6N_1-HE
1121	chr2R	7869134	7869205	chr2R	7873991	7874063	Doc	23	4855	12.0	13.5	12.8	1.7	4929	chr2R	7869134	intron	Dgk -	chr2R	7871598	intron	Dgk -	chr2R	7874063	intron	Dgk -	chr2R_23_7870001	chr2R_7870001	RG6N_1-HE
1135	chr2R	8330812	8330823	chr2R	8331368	8331374	roo	5	555	23.5	19.0	21.2	0.2	562	chr2R	8330812	intron	pdm3 +	chr2R	8331093	intron	pdm3 +	chr2R	8331374	intron	pdm3 +	chr2R_5_8330001	chr2R_8330001	RG6N_1-HE
1136	chr2R	8330828	8330872	chr2R	8331365	8331427	roo	15	553	13.0	17.0	15.0	0.9	599	chr2R	8330828	intron	pdm3 +	chr2R	8331128	intron	pdm3 +	chr2R	8331427	intron	pdm3 +	chr2R_15_8330001	chr2R_8330001	RG6N_1-HE
1142	chr2R	8398166	8398237	chr2R	8403002	8403016	Doc	21	4839	6.5	7.0	6.8	2.7	4850	chr2R	8398166	intron	CG2121 -	chr2R	8400591	intron	CG2121 -	chr2R	8403016	intron	CG2121 -	chr2R_21_8400001	chr2R_8400001	RG6N_1-HE
1152	chr2R	8565997	8566057	chr2R	8567014	8567074	1360	21	1014	8.5	10.0	9.2	2.1	1077	chr2R	8565997	5` UTR	Cyp6a14 -	chr2R	8566536	5` UTR	Cyp6a14 -	chr2R	8567074	5` UTR	Cyp6a14 -	chr2R_21_8565001	chr2R_8565001	RG6N_1-HE
1156	chr2R	8722731	8722788	chr2R	8723016	8723099	pogo	14	296	7.0	9.0	8.0	1.6	368	chr2R	8722731	intron	CG14767 -	chr2R	8722915	intron	CG14767 -	chr2R	8723099	intron	CG14767 -	chr2R_14_8720001	chr2R_8720001	RG6N_1-HE
1157	chr2R	8777855	8777943	chr2R	8784130	8784205	diver	25	6272	3.0	6.0	4.5	4.5	6350	chr2R	8777855	intergenic	not near genes	chr2R	8781030	intergenic	not near genes	chr2R	8784205	intergenic	not near genes	chr2R_25_8780001	chr2R_8780001	RG6N_1-HE
1164	chr2R	9151287	9151314	chr2R	9157786	9157855	Burdock	5	6524	5.5	2.5	4.0	1.0	6568	chr2R	9151287	exon	CG30345 +	chr2R	9154571	intergenic	not near genes	chr2R	9157855	intergenic	CG8008 -	chr2R_5_9150001	chr2R_9150001	RG6N_1-HE
1166	chr2R	9212650	9212707	chr2R	9213201	9213215	roo	9	545	11.0	10.0	10.5	0.8	565	chr2R	9212650	intergenic	CR45309 +	chr2R	9212932	intergenic	CR45309 +	chr2R	9213215	5` UTR	CR45309 +	chr2R_9_9210001	chr2R_9210001	RG6N_1-HE
1177	chr2R	9480025	9480054	chr2R	9490627	9490656	roo	6	10602	13.5	3.5	8.5	0.6	10631	chr2R	9480025	intergenic	not near genes	chr2R	9485340	intergenic	not near genes	chr2R	9490656	intergenic	not near genes	chr2R_6_9485001	chr2R_9485001	RG6N_1-HE
1181	chr2R	9726557	9726635	chr2R	9734178	9734245	17.6	25	7621	10.5	10.0	10.2	2.2	7688	chr2R	9726557	intron	sqa -	chr2R	9730401	intron	sqa -	chr2R	9734245	intron	sqa -	chr2R_25_9730001	chr2R_9730001	RG6N_1-HE
1188	chr2R	9871041	9871061	chr2R	9871577	9871608	roo	7	547	0.0	11.5	5.8	1.0	567	chr2R	9871041	intron	cbx -	chr2R	9871324	intron	cbx -	chr2R	9871608	intron,5` UTR	cbx -,CG18446 +	chr2R_7_9870001	chr2R_9870001	RG6N_1-HE
1191	chr2R	9945375	9945398	chr2R	9945642	9945665	BS	5	261	16.0	10.0	13.0	0.4	290	chr2R	9945375	intron	Mef2 -	chr2R	9945520	intron	Mef2 -	chr2R	9945665	intron	Mef2 -	chr2R_5_9945001	chr2R_9945001	RG6N_1-HE
1192	chr2R	9945401	9945448	chr2R	9945637	9945708	BS	26	260	7.0	8.0	7.5	3.1	307	chr2R	9945401	intron	Mef2 -	chr2R	9945554	intron	Mef2 -	chr2R	9945708	intron	Mef2 -	chr2R_26_9945001	chr2R_9945001	RG6N_1-HE
1195	chr2R	10005805	10005878	chr2R	10007021	10007063	1360	25	1208	12.5	8.5	10.5	2.2	1258	chr2R	10005805	intron	Pka-R2 -	chr2R	10006434	intron	Pka-R2 -	chr2R	10007063	intron	Pka-R2 -	chr2R_25_10005001	chr2R_10005001	RG6N_1-HE
1199	chr2R	10176822	10176902	chr2R	10186059	10186134	roo	26	9237	12.5	12.5	12.5	1.9	9312	chr2R	10176822	intron	KCNQ -	chr2R	10181478	intron	KCNQ -	chr2R	10186134	intron	KCNQ -	chr2R_26_10180001	chr2R_10180001	RG6N_1-HE
1230	chr2R	10585500	10585573	chr2R	10594148	10594227	Tirant	8	8652	14.0	12.5	13.2	0.6	8727	chr2R	10585500	intron	psq +	chr2R	10589864	intron	psq +	chr2R	10594227	intron	psq +	chr2R_8_10585001	chr2R_10585001	RG6N_1-HE
1231	chr2R	10585574	10585585	chr2R	10594147	10594204	Tirant	4	8620	10.5	12.5	11.5	0.3	8630	chr2R	10585574	intron	psq +	chr2R	10589889	intron	psq +	chr2R	10594204	intron	psq +	chr2R_4_10585001	chr2R_10585001	RG6N_1-HE
1250	chr2R	10948013	10948039	chr2R	10955586	10955647	17.6	8	7600	0.5	6.0	3.2	1.9	7634	chr2R	10948013	intergenic	not near genes	chr2R	10951830	intergenic	not near genes	chr2R	10955647	intergenic	not near genes	chr2R_8_10950001	chr2R_10950001	RG6N_1-HE
1253	chr2R	10979631	10979662	chr2R	10980136	10980199	297	5	528	9.0	5.5	7.2	0.6	568	chr2R	10979631	intergenic	not near genes	chr2R	10979915	intergenic	not near genes	chr2R	10980199	intergenic	not near genes	chr2R_5_10975001	chr2R_10975001	RG6N_1-HE
1254	chr2R	11009765	11009848	chr2R	11019005	11019035	roo	18	9230	9.5	14.5	12.0	1.4	9270	chr2R	11009765	intron	luna -	chr2R	11014400	intron	luna -	chr2R	11019035	intron	luna -	chr2R_18_11010001	chr2R_11010001	RG6N_1-HE
1255	chr2R	11019839	11019898	chr2R	11024952	11025035	jockey	15	5129	9.5	12.0	10.8	1.3	5196	chr2R	11019839	intron	luna -	chr2R	11022437	intron	luna -	chr2R	11025035	intron	luna -	chr2R_15_11020001	chr2R_11020001	RG6N_1-HE
1261	chr2R	11207763	11207811	chr2R	11208025	11208074	BS	27	258	36.0	19.0	27.5	0.9	311	chr2R	11207763	intron	shn +	chr2R	11207918	intron	shn +	chr2R	11208074	intron	shn +	chr2R_27_11205001	chr2R_11205001	RG6N_1-HE
1262	chr2R	11207815	11207836	chr2R	11208010	11208055	BS	13	252	25.5	15.0	20.2	0.6	240	chr2R	11207815	intron	shn +	chr2R	11207935	intron	shn +	chr2R	11208055	intron	shn +	chr2R_13_11205001	chr2R_11205001	RG6N_1-HE
1267	chr2R	11297571	11297623	chr2R	11301966	11301975	flea	11	4390	12.0	2.0	7.0	1.4	4404	chr2R	11297571	intergenic	CG42336 -	chr2R	11299773	intergenic	not near genes	chr2R	11301975	5` UTR	CG7741 +	chr2R_11_11295001	chr2R_11295001	RG6N_1-HE
1271	chr2R	11415446	11415546	chr2R	11418678	11418720	opus	27	3211	0.0	10.5	5.2	4.4	3274	chr2R	11415446	intron,3` UTR	Drip -,CG7763 +	chr2R	11417083	intron	Drip -	chr2R	11418720	intron	Drip -	chr2R_27_11415001	chr2R_11415001	RG6N_1-HE
1277	chr2R	11472586	11472669	chr2R	11473854	11473906	pogo	24	1263	6.0	7.0	6.5	3.2	1320	chr2R	11472586	intergenic	not near genes	chr2R	11473246	intergenic	not near genes	chr2R	11473906	intergenic	not near genes	chr2R_24_11470001	chr2R_11470001	RG6N_1-HE
1313	chr2R	12481145	12481163	chr2R	12482949	12482973	roo	14	1835	6.5	11.5	9.0	1.4	1828	chr2R	12481145	exon	Dh44-R2 +	chr2R	12482059	intron	Dh44-R2 +	chr2R	12482973	intron	Dh44-R2 +	chr2R_14_12480001	chr2R_12480001	RG6N_1-HE
1315	chr2R	12501644	12501714	chr2R	12503860	12503924	Rt1c	19	2221	10.5	8.0	9.2	1.9	2280	chr2R	12501644	intron	fdl -	chr2R	12502784	intron	fdl -	chr2R	12503924	intron	fdl -	chr2R_19_12500001	chr2R_12500001	RG6N_1-HE
1323	chr2R	12707462	12707511	chr2R	12715899	12715947	roo	4	8435	2.0	0.0	1.0	2.0	8485	chr2R	12707462	intron	CG42663 +	chr2R	12711704	intron	CG42663 +	chr2R	12715947	intron	CG42663 +	chr2R_4_12710001	chr2R_12710001	RG6N_1-HE
1335	chr2R	12789264	12789326	chr2R	12797666	12797692	roo	19	8410	8.0	8.0	8.0	2.1	8428	chr2R	12789264	intron,3` UTR	sca +,CR45137 -	chr2R	12793478	intron,intron	sca +,CR45137 -	chr2R	12797692	intron,3` UTR	sca +,CR45137 -	chr2R_19_12790001	chr2R_12790001	RG6N_1-HE
1338	chr2R	12819397	12819470	chr2R	12824531	12824584	jockey	18	5130	3.5	8.0	5.8	2.6	5187	chr2R	12819397	intergenic	not near genes	chr2R	12821990	intergenic	not near genes	chr2R	12824584	intergenic	not near genes	chr2R_18_12820001	chr2R_12820001	RG6N_1-HE
1344	chr2R	12994779	12994789	chr2R	12994933	12994943	INE-1	4	154	3.0	7.5	5.2	0.6	164	chr2R	12994779	intergenic	CG33798 +	chr2R	12994861	intergenic	CG33798 +	chr2R	12994943	intergenic	CG33798 +	chr2R_4_12990001	chr2R_12990001	RG6N_1-HE
1353	chr2R	13136783	13136860	chr2R	13141652	13141687	Doc	18	4863	5.0	6.0	5.5	2.8	4904	chr2R	13136783	exon	Cap-G +	chr2R	13139235	intron	Cap-G +	chr2R	13141687	intron	Cap-G +	chr2R_18_13135001	chr2R_13135001	RG6N_1-HE
1369	chr2R	13580445	13580518	chr2R	13580867	13580930	jockey	13	416	2.0	6.5	4.2	2.5	485	chr2R	13580445	3` UTR	CG6191 -	chr2R	13580688	3` UTR,3` UTR	CG6191 -,CG45088 -	chr2R	13580930	3` UTR,3` UTR	CG6191 -,CG45088 -	chr2R_13_13580001	chr2R_13580001	RG6N_1-HE
1381	chr2R	13728060	13728115	chr2R	13735791	13735846	opus	13	7729	14.0	6.0	10.0	1.2	7786	chr2R	13728060	intron	fas +	chr2R	13731953	intron	fas +	chr2R	13735846	intron	fas +	chr2R_13_13730001	chr2R_13730001	RG6N_1-HE
1387	chr2R	13905551	13905571	chr2R	13907601	13907624	Rt1a	9	2051	20.0	13.5	16.8	0.5	2073	chr2R	13905551	intron	shot -	chr2R	13906588	intron	shot -	chr2R	13907624	intron	shot -	chr2R_9_13905001	chr2R_13905001	RG6N_1-HE
1388	chr2R	13905576	13905617	chr2R	13907592	13907670	Rt1a	20	2042	11.5	11.0	11.2	1.6	2094	chr2R	13905576	intron	shot -	chr2R	13906623	intron	shot -	chr2R	13907670	intron	shot -	chr2R_20_13905001	chr2R_13905001	RG6N_1-HE
1409	chr2R	14467235	14467321	chr2R	14476447	14476515	roo	29	9212	6.0	10.0	8.0	3.2	9280	chr2R	14467235	intergenic	not near genes	chr2R	14471875	intergenic	not near genes	chr2R	14476515	5` UTR	CR44462 +	chr2R_29_14470001	chr2R_14470001	RG6N_1-HE
1410	chr2R	14497329	14497406	chr2R	14498566	14498643	1360	21	1234	7.5	9.5	8.5	2.2	1314	chr2R	14497329	intergenic	L +,Cpsf160 -	chr2R	14497986	intron	Cpsf160 -	chr2R	14498643	3` UTR	Cpsf160 -	chr2R_21_14495001	chr2R_14495001	RG6N_1-HE
1418	chr2R	14889149	14889242	chr2R	14897828	14897908	Max-element	22	8672	4.0	0.0	2.0	7.3	8759	chr2R	14889149	intergenic	Cyp6a8 -	chr2R	14893528	intergenic	not near genes	chr2R	14897908	intergenic	not near genes	chr2R_22_14890001	chr2R_14890001	RG6N_1-HE
1425	chr2R	15004673	15004760	chr2R	15005073	15005160	jockey	17	399	7.5	0.0	3.8	3.5	487	chr2R	15004673	intergenic	not near genes	chr2R	15004916	intergenic	not near genes	chr2R	15005160	intergenic	not near genes	chr2R_17_15000001	chr2R_15000001	RG6N_1-HE
1426	chr2R	15015418	15015481	chr2R	15022885	15022966	mdg1	24	7485	7.5	5.5	6.5	3.2	7548	chr2R	15015418	intron	hbs +	chr2R	15019192	intron	hbs +	chr2R	15022966	intron	hbs +	chr2R_24_15015001	chr2R_15015001	RG6N_1-HE
1428	chr2R	15084916	15084994	chr2R	15092036	15092096	297	10	7113	8.5	6.0	7.2	1.2	7180	chr2R	15084916	intergenic	not near genes	chr2R	15088506	intergenic	not near genes	chr2R	15092096	5` UTR	CR44457 +	chr2R_10_15085001	chr2R_15085001	RG6N_1-HE
1431	chr2R	15119253	15119329	chr2R	15127805	15127845	Tirant	29	8538	19.0	8.0	13.5	2.0	8592	chr2R	15119253	intron	chn +	chr2R	15123549	intron	chn +	chr2R	15127845	intron	chn +	chr2R_29_15120001	chr2R_15120001	RG6N_1-HE
1441	chr2R	15340634	15340665	chr2R	15349278	15349321	Tirant	18	8652	19.5	12.0	15.8	1.1	8687	chr2R	15340634	intron	unc-5 +	chr2R	15344978	intron	unc-5 +	chr2R	15349321	intron	unc-5 +	chr2R_18_15340001	chr2R_15340001	RG6N_1-HE
1456	chr2R	16061671	16061714	chr2R	16064386	16064431	Burdock	9	2709	15.5	6.0	10.8	0.8	2760	chr2R	16061671	intergenic	not near genes	chr2R	16063051	intergenic	not near genes	chr2R	16064431	intergenic	not near genes	chr2R_9_16060001	chr2R_16060001	RG6N_1-HE
1499	chr2R	17236439	17236507	chr2R	17241715	17241778	copia	25	5273	8.0	6.5	7.2	3.0	5339	chr2R	17236439	intron	mbl +	chr2R	17239108	intron	mbl +	chr2R	17241778	intron	mbl +	chr2R_25_17235001	chr2R_17235001	RG6N_1-HE
1503	chr2R	17277162	17277172	chr2R	17277641	17277651	jockey	7	479	16.0	5.0	10.5	0.6	489	chr2R	17277162	intron	mbl +	chr2R	17277406	intron	mbl +	chr2R	17277651	intron	mbl +	chr2R_7_17275001	chr2R_17275001	RG6N_1-HE
1507	chr2R	17485859	17485938	chr2R	17490699	17490777	F-element	14	4835	6.5	5.5	6.0	2.0	4918	chr2R	17485859	5` UTR,intron	CG43110 -,NT5E-2 +	chr2R	17488318	intron	NT5E-2 +	chr2R	17490777	intron	NT5E-2 +	chr2R_14_17485001	chr2R_17485001	RG6N_1-HE
1512	chr2R	17782308	17782363	chr2R	17783580	17783633	pogo	8	1273	3.0	0.0	1.5	3.2	1325	chr2R	17782308	intergenic	CG33981 -,fab1 -	chr2R	17782970	intergenic	not near genes	chr2R	17783633	intergenic	mir-31a -	chr2R_8_17780001	chr2R_17780001	RG6N_1-HE
1513	chr2R	17783981	17784049	chr2R	17784271	17784319	pogo	21	301	16.5	12.0	14.2	1.4	338	chr2R	17783981	intergenic	mir-31a -	chr2R	17784150	intergenic	mir-31a -	chr2R	17784319	intergenic	mir-31a -	chr2R_21_17780001	chr2R_17780001	RG6N_1-HE
1532	chr2R	18045602	18045676	chr2R	18046024	18046099	jockey	18	423	6.0	3.0	4.5	3.3	497	chr2R	18045602	intergenic	not near genes	chr2R	18045850	intergenic	not near genes	chr2R	18046099	intergenic	CG5767 -	chr2R_18_18045001	chr2R_18045001	RG6N_1-HE
1534	chr2R	18111631	18111658	chr2R	18115570	18115596	F-element	4	3939	13.0	0.0	6.5	0.5	3965	chr2R	18111631	intergenic	not near genes	chr2R	18113614	intergenic	not near genes	chr2R	18115596	intergenic	not near genes	chr2R_4_18110001	chr2R_18110001	RG6N_1-HE
1548	chr2R	18487784	18487821	chr2R	18495289	18495343	blood	14	7517	9.0	14.5	11.8	1.1	7559	chr2R	18487784	intron	CG30116 -	chr2R	18491564	intron	CG30116 -	chr2R	18495343	intron	CG30116 -	chr2R_14_18490001	chr2R_18490001	RG6N_1-HE
1550	chr2R	18575743	18575809	chr2R	18581990	18582067	3S18	9	6245	8.5	5.0	6.8	1.2	6324	chr2R	18575743	intron	GEFmeso -	chr2R	18578905	intron	GEFmeso -	chr2R	18582067	intron	GEFmeso -	chr2R_9_18575001	chr2R_18575001	RG6N_1-HE
1551	chr2R	18575810	18575826	chr2R	18581985	18582018	3S18	25	6221	6.5	3.5	5.0	4.2	6208	chr2R	18575810	intron	GEFmeso -	chr2R	18578914	intron	GEFmeso -	chr2R	18582018	intron	GEFmeso -	chr2R_25_18575001	chr2R_18575001	RG6N_1-HE
1552	chr2R	18590813	18590900	chr2R	18600025	18600081	roo	26	9209	3.0	6.5	4.8	4.5	9268	chr2R	18590813	intron	GEFmeso -	chr2R	18595447	intron	GEFmeso -	chr2R	18600081	intron	GEFmeso -	chr2R_26_18595001	chr2R_18595001	RG6N_1-HE
1591	chr2R	19715774	19715813	chr2R	19723334	19723373	blood	4	7559	4.5	2.0	3.2	1.0	7599	chr2R	19715774	intergenic	not near genes	chr2R	19719574	intergenic	not near genes	chr2R	19723373	intergenic	not near genes	chr2R_4_19715001	chr2R_19715001	RG6N_1-HE
1592	chr2R	19776570	19776606	chr2R	19779922	19779991	jockey	8	3381	3.0	5.0	4.0	1.6	3421	chr2R	19776570	intergenic	not near genes	chr2R	19778280	intergenic	not near genes	chr2R	19779991	intergenic	not near genes	chr2R_8_19775001	chr2R_19775001	RG6N_1-HE
1596	chr2R	19957367	19957409	chr2R	19962634	19962682	copia	9	5268	10.0	5.0	7.5	1.1	5315	chr2R	19957367	intergenic	CG44623 +	chr2R	19960024	intergenic	not near genes	chr2R	19962682	intergenic	not near genes	chr2R_9_19960001	chr2R_19960001	RG6N_1-HE
1597	chr2R	19957410	19957455	chr2R	19962632	19962702	copia	13	5257	1.5	5.0	3.2	3.1	5292	chr2R	19957410	intergenic	CG44623 +	chr2R	19960056	intergenic	not near genes	chr2R	19962702	intergenic	not near genes	chr2R_13_19960001	chr2R_19960001	RG6N_1-HE
1603	chr2R	20069188	20069270	chr2R	20071889	20071961	opus	5	2695	3.5	9.0	6.2	0.7	2773	chr2R	20069188	intergenic	not near genes	chr2R	20070574	intergenic	not near genes	chr2R	20071961	intergenic	not near genes	chr2R_5_20070001	chr2R_20070001	RG6N_1-HE
1612	chr2R	20368443	20368494	chr2R	20377701	20377752	roo	14	9257	5.0	10.0	7.5	1.6	9309	chr2R	20368443	intergenic	not near genes	chr2R	20373098	intergenic	not near genes	chr2R	20377752	intergenic	not near genes	chr2R_14_20370001	chr2R_20370001	RG6N_1-HE
1635	chr2R	20739392	20739475	chr2R	20744212	20744252	F-element	27	4825	9.0	9.0	9.0	2.7	4860	chr2R	20739392	intron	dpr +	chr2R	20741822	intron	dpr +	chr2R	20744252	intron	dpr +	chr2R_27_20740001	chr2R_20740001	RG6N_1-HE
1639	chr2R	20783243	20783293	chr2R	20788086	20788136	F-element	5	4843	4.5	1.5	3.0	1.2	4893	chr2R	20783243	intergenic	not near genes	chr2R	20785690	intergenic	not near genes	chr2R	20788136	intergenic	CG43666 -	chr2R_5_20785001	chr2R_20785001	RG6N_1-HE
1650	chr2R	21151075	21151145	chr2R	21153758	21153836	opus	10	2688	0.5	6.0	3.2	2.4	2761	chr2R	21151075	exon	CG30389 -	chr2R	21152456	intron	CG30389 -	chr2R	21153836	intron	CG30389 -	chr2R_10_21150001	chr2R_21150001	RG6N_1-HE
1674	chr2R	21738230	21738264	chr2R	21747441	21747470	roo	5	9213	7.0	14.0	10.5	0.4	9240	chr2R	21738230	intergenic	not near genes	chr2R	21742850	intergenic	not near genes	chr2R	21747470	intergenic	not near genes	chr2R_5_21740001	chr2R_21740001	RG6N_1-HE
1675	chr2R	21753045	21753104	chr2R	21753575	21753660	roo	42	548	13.0	17.5	15.2	2.6	615	chr2R	21753045	intergenic	not near genes	chr2R	21753352	intergenic	not near genes	chr2R	21753660	intergenic	not near genes	chr2R_42_21750001	chr2R_21750001	RG6N_1-HE
1681	chr2R	21809461	21809513	chr2R	21817764	21817824	roo	13	8309	5.5	5.5	5.5	2.0	8363	chr2R	21809461	intergenic	not near genes	chr2R	21813642	intergenic	not near genes	chr2R	21817824	intergenic	not near genes	chr2R_13_21810001	chr2R_21810001	RG6N_1-HE
1701	chr2R	22349633	22349712	chr2R	22351488	22351551	jockey	33	1850	12.0	16.0	14.0	2.2	1918	chr2R	22349633	intron	Liprin-gamma -	chr2R	22350592	intron	Liprin-gamma -	chr2R	22351551	intron	Liprin-gamma -	chr2R_33_22350001	chr2R_22350001	RG6N_1-HE
1702	chr2R	22360322	22360405	chr2R	22360825	22360910	jockey	7	501	13.5	7.5	10.5	0.6	588	chr2R	22360322	intron	Liprin-gamma -	chr2R	22360616	intron	Liprin-gamma -	chr2R	22360910	intron	Liprin-gamma -	chr2R_7_22360001	chr2R_22360001	RG6N_1-HE
1705	chr2R	22465263	22465330	chr2R	22465533	22465599	BS	25	269	18.5	7.0	12.8	1.8	336	chr2R	22465263	intron	CG10384 +	chr2R	22465431	intron	CG10384 +	chr2R	22465599	intron	CG10384 +	chr2R_25_22465001	chr2R_22465001	RG6N_1-HE
1708	chr2R	22525692	22525766	chr2R	22529314	22529396	jockey	12	3624	6.0	5.0	5.5	1.8	3704	chr2R	22525692	intron	px -	chr2R	22527544	intron	px -	chr2R	22529396	intron	px -	chr2R_12_22525001	chr2R_22525001	RG6N_1-HE
1711	chr2R	22580379	22580418	chr2R	22586601	22586639	diver	9	6221	5.0	4.0	4.5	1.6	6260	chr2R	22580379	intron	dnr1 -	chr2R	22583509	intron	dnr1 -	chr2R	22586639	intron	dnr1 -	chr2R_9_22580001	chr2R_22580001	RG6N_1-HE
1719	chr2R	22774915	22774928	chr2R	22775405	22775417	jockey	10	490	19.5	8.5	14.0	0.7	502	chr2R	22774915	intron	CG42260 -	chr2R	22775166	intron	CG42260 -	chr2R	22775417	intron	CG42260 -	chr2R_10_22775001	chr2R_22775001	RG6N_1-HE
1720	chr2R	22774932	22774986	chr2R	22775404	22775470	jockey	19	487	10.0	8.5	9.2	1.9	538	chr2R	22774932	intron	CG42260 -	chr2R	22775201	intron	CG42260 -	chr2R	22775470	intron	CG42260 -	chr2R_19_22775001	chr2R_22775001	RG6N_1-HE
1726	chr2R	22843017	22843046	chr2R	22845054	22845083	flea	6	2036	4.0	0.5	2.2	1.9	2066	chr2R	22843017	intergenic	CG9826 +	chr2R	22844050	intergenic	not near genes	chr2R	22845083	intergenic	not near genes	chr2R_6_22840001	chr2R_22840001	RG6N_1-HE
1756	chr2R	23529539	23529565	chr2R	23537155	23537156	412	8	7620	6.5	6.0	6.2	1.1	7617	chr2R	23529539	intron	bw -	chr2R	23533348	intron	bw -	chr2R	23537156	exon	bw -	chr2R_8_23530001	chr2R_23530001	RG6N_1-HE
1757	chr2R	23529567	23529598	chr2R	23537152	23537208	412	8	7599	5.5	6.0	5.8	1.2	7641	chr2R	23529567	intron	bw -	chr2R	23533388	intron	bw -	chr2R	23537208	exon	bw -	chr2R_8_23530001	chr2R_23530001	RG6N_1-HE
1767	chr2R	23877673	23877730	chr2R	23878215	23878272	297	5	541	5.0	4.5	4.8	0.9	599	chr2R	23877673	intergenic	ken +	chr2R	23877972	intergenic	TM4SF +	chr2R	23878272	5` UTR	TM4SF +	chr2R_5_23875001	chr2R_23875001	RG6N_1-HE
1768	chr2R	23914243	23914330	chr2R	23921938	23922006	412	13	7682	3.5	6.5	5.0	2.2	7763	chr2R	23914243	exon	kcc +	chr2R	23918124	intron	kcc +	chr2R	23922006	exon	kcc +	chr2R_13_23915001	chr2R_23915001	RG6N_1-HE
1773	chr2R	24147003	24147086	chr2R	24154652	24154714	412	26	7637	5.0	5.5	5.2	4.2	7711	chr2R	24147003	intron	Dat +	chr2R	24150858	intron	Dat +	chr2R	24154714	intron	Dat +	chr2R_26_24150001	chr2R_24150001	RG6N_1-HE
1774	chr2R	24177183	24177258	chr2R	24184739	24184810	412	9	7554	8.5	5.0	6.8	1.2	7627	chr2R	24177183	3` UTR	Nop60B +	chr2R	24180996	intron	Nop60B +	chr2R	24184810	intron	Nop60B +	chr2R_9_24180001	chr2R_24180001	RG6N_1-HE
1784	chr2R	24647560	24647606	chr2R	24655188	24655228	412	6	7626	7.5	7.0	7.2	0.7	7668	chr2R	24647560	intergenic	not near genes	chr2R	24651394	intergenic	not near genes	chr2R	24655228	intergenic	not near genes	chr2R_6_24650001	chr2R_24650001	RG6N_1-HE
1786	chr2R	24727836	24727907	chr2R	24735398	24735454	mdg1	10	7560	5.5	9.5	7.5	1.2	7618	chr2R	24727836	intron	Mid1 -	chr2R	24731645	intron	Mid1 -	chr2R	24735454	intron	Mid1 -	chr2R_10_24730001	chr2R_24730001	RG6N_1-HE
1789	chr2R	24763592	24763643	chr2R	24765595	24765659	G2	4	2012	2.5	4.0	3.2	1.0	2067	chr2R	24763592	exon	CG3894 +	chr2R	24764626	intron	CG3894 +	chr2R	24765659	exon	CG3894 +	chr2R_4_24760001	chr2R_24760001	RG6N_1-HE
1798	chr2R	25141596	25141652	chr2R	25159357	25159413	roo	15	17760	6.0	8.0	7.0	1.9	17817	chr2R	25141596	intergenic	not near genes	chr2R	25150504	intergenic	not near genes	chr2R	25159413	intergenic	not near genes	chr2R_15_25150001	chr2R_25150001	RG6N_1-HE
1799	chr2R	25141655	25141676	chr2R	25159354	25159429	roo	7	17750	3.5	8.0	5.8	1.0	17774	chr2R	25141655	intergenic	not near genes	chr2R	25150542	intergenic	not near genes	chr2R	25159429	intergenic	not near genes	chr2R_7_25150001	chr2R_25150001	RG6N_1-HE
1806	chr3L	110154	110231	chr3L	119392	119467	roo	15	9236	3.0	3.0	3.0	3.8	9313	chr3L	110154	intergenic	not near genes	chr3L	114810	intergenic	not near genes	chr3L	119467	intergenic	not near genes	chr3L_15_110001	chr3L_110001	RG6N_1-HE
1814	chr3L	402652	402713	chr3L	409748	409812	297	34	7113	11.0	14.5	12.8	2.5	7160	chr3L	402652	intergenic	not near genes	chr3L	406232	intergenic	not near genes	chr3L	409812	intergenic	not near genes	chr3L_34_405001	chr3L_405001	RG6N_1-HE
1831	chr3L	789855	789942	chr3L	790411	790496	roo	25	547	14.0	9.5	11.8	2.0	641	chr3L	789855	intergenic	not near genes	chr3L	790176	intergenic	not near genes	chr3L	790496	intergenic	not near genes	chr3L_25_790001	chr3L_790001	RG6N_1-HE
1834	chr3L	857952	858030	chr3L	866481	866548	Tirant	21	8527	6.0	6.5	6.2	2.9	8596	chr3L	857952	intergenic	not near genes	chr3L	862250	intergenic	not near genes	chr3L	866548	5` UTR	CG12502 +	chr3L_21_860001	chr3L_860001	RG6N_1-HE
1835	chr3L	925113	925193	chr3L	932610	932690	mdg1	11	7494	2.5	3.5	3.0	2.8	7577	chr3L	925113	intron	Glut1 +	chr3L	928902	intron	Glut1 +	chr3L	932690	intron	Glut1 +	chr3L_11_925001	chr3L_925001	RG6N_1-HE
1837	chr3L	939732	939788	chr3L	940907	940939	jockey	12	1184	4.0	4.5	4.2	2.3	1207	chr3L	939732	intron	Glut1 +	chr3L	940336	intron	Glut1 +	chr3L	940939	intron	Glut1 +	chr3L_12_940001	chr3L_940001	RG6N_1-HE
1840	chr3L	1047298	1047320	chr3L	1055175	1055185	412	4	7876	5.0	1.0	3.0	1.0	7887	chr3L	1047298	intron	bab1 -	chr3L	1051242	intron	bab1 -	chr3L	1055185	intron	bab1 -	chr3L_4_1050001	chr3L_1050001	RG6N_1-HE
1841	chr3L	1047330	1047385	chr3L	1055169	1055217	412	5	7844	0.5	1.0	0.8	2.8	7887	chr3L	1047330	intron	bab1 -	chr3L	1051274	intron	bab1 -	chr3L	1055217	intron	bab1 -	chr3L_5_1050001	chr3L_1050001	RG6N_1-HE
1848	chr3L	1219545	1219611	chr3L	1227328	1227369	412	8	7786	3.0	2.5	2.8	2.1	7824	chr3L	1219545	intron	mwh +	chr3L	1223457	intron	mwh +	chr3L	1227369	intron	mwh +	chr3L_8_1220001	chr3L_1220001	RG6N_1-HE
1858	chr3L	1424758	1424769	chr3L	1430014	1430072	Rt1a	5	5284	0.0	3.5	1.8	1.8	5314	chr3L	1424758	intron	Ptp61F -	chr3L	1427415	intron	Ptp61F -	chr3L	1430072	intron	Ptp61F -	chr3L_5_1425001	chr3L_1425001	RG6N_1-HE
1860	chr3L	1485714	1485741	chr3L	1486908	1486939	1360	8	1219	4.5	7.0	5.8	1.2	1225	chr3L	1485714	intron	stet -	chr3L	1486326	intron	stet -	chr3L	1486939	intron	stet -	chr3L_8_1485001	chr3L_1485001	RG6N_1-HE
1861	chr3L	1505948	1506029	chr3L	1513611	1513665	17.6	7	7652	8.0	8.0	8.0	0.8	7717	chr3L	1505948	intron,intron	Psa +,cue -	chr3L	1509806	intron,intron	Psa +,cue -	chr3L	1513665	intron,intron	Psa +,cue -	chr3L_7_1505001	chr3L_1505001	RG6N_1-HE
1868	chr3L	1740793	1740800	chr3L	1741109	1741116	pogo	5	316	11.5	5.5	8.5	0.5	323	chr3L	1740793	intron	Gk +	chr3L	1740954	intron	Gk +	chr3L	1741116	intron	Gk +	chr3L_5_1740001	chr3L_1740001	RG6N_1-HE
1869	chr3L	1740804	1740867	chr3L	1741104	1741164	pogo	6	306	5.5	4.5	5.0	1.0	360	chr3L	1740804	intron	Gk +	chr3L	1740984	intron	Gk +	chr3L	1741164	intron	Gk +	chr3L_6_1740001	chr3L_1740001	RG6N_1-HE
1883	chr3L	2108211	2108224	chr3L	2113486	2113499	copia	5	5275	4.5	8.5	6.5	0.7	5288	chr3L	2108211	intron	sls -	chr3L	2110855	intron	sls -	chr3L	2113499	intron	sls -	chr3L_5_2110001	chr3L_2110001	RG6N_1-HE
1901	chr3L	2447447	2447502	chr3L	2456674	2456729	roo	10	9221	1.5	6.0	3.8	2.1	9282	chr3L	2447447	intron	CG45186 +	chr3L	2452088	intron	CG45186 +	chr3L	2456729	intron	CG45186 +	chr3L_10_2450001	chr3L_2450001	RG6N_1-HE
1902	chr3L	2447506	2447526	chr3L	2456666	2456753	roo	6	9206	1.5	5.0	3.2	1.4	9247	chr3L	2447506	intron	CG45186 +	chr3L	2452130	intron	CG45186 +	chr3L	2456753	intron	CG45186 +	chr3L_6_2450001	chr3L_2450001	RG6N_1-HE
1922	chr3L	2751412	2751458	chr3L	2755778	2755810	F-element	14	4364	3.5	11.5	7.5	1.6	4398	chr3L	2751412	intron	Mrtf -	chr3L	2753611	intron	Mrtf -	chr3L	2755810	intron	Mrtf -	chr3L_14_2750001	chr3L_2750001	RG6N_1-HE
1929	chr3L	2927780	2927800	chr3L	2936128	2936147	Tirant	11	8348	19.0	9.0	14.0	0.7	8367	chr3L	2927780	intron	Shab +	chr3L	2931964	intron	Shab +	chr3L	2936147	intron	Shab +	chr3L_11_2930001	chr3L_2930001	RG6N_1-HE
1930	chr3L	2927805	2927861	chr3L	2936127	2936209	Tirant	27	8345	10.5	9.0	9.8	2.5	8404	chr3L	2927805	intron	Shab +	chr3L	2932007	intron	Shab +	chr3L	2936209	intron	Shab +	chr3L_27_2930001	chr3L_2930001	RG6N_1-HE
1934	chr3L	3051684	3051736	chr3L	3051997	3052053	pogo	7	315	6.5	5.5	6.0	1.0	369	chr3L	3051684	3` UTR	CG32485 +	chr3L	3051868	intergenic	CG32485 +	chr3L	3052053	intergenic	CG32485 +,CG1271 +	chr3L_7_3050001	chr3L_3050001	RG6N_1-HE
1935	chr3L	3061254	3061308	chr3L	3069869	3069947	Tirant	16	8624	12.5	7.0	9.8	1.5	8693	chr3L	3061254	intron	CG32486 -	chr3L	3065600	intron	CG32486 -	chr3L	3069947	intron	CG32486 -	chr3L_16_3065001	chr3L_3065001	RG6N_1-HE
1942	chr3L	3281374	3281422	chr3L	3281941	3281978	Doc	21	552	22.5	15.5	19.0	1.1	604	chr3L	3281374	intron	CG12017 +	chr3L	3281676	intron	CG12017 +	chr3L	3281978	intron	CG12017 +	chr3L_21_3280001	chr3L_3280001	RG6N_1-HE
1943	chr3L	3281423	3281460	chr3L	3281934	3281999	Doc	24	549	11.0	14.5	12.8	1.7	576	chr3L	3281423	intron	CG12017 +	chr3L	3281711	intron	CG12017 +	chr3L	3281999	intron	CG12017 +	chr3L_24_3280001	chr3L_3280001	RG6N_1-HE
1967	chr3L	3601236	3601324	chr3L	3606618	3606683	copia	14	5377	4.5	7.0	5.8	2.1	5447	chr3L	3601236	intron	Eip63E +	chr3L	3603960	intron	Eip63E +	chr3L	3606683	intron	Eip63E +	chr3L_14_3600001	chr3L_3600001	RG6N_1-HE
1978	chr3L	3833670	3833753	chr3L	3833982	3834065	pogo	28	310	20.5	11.5	16.0	1.6	395	chr3L	3833670	exon	enc +	chr3L	3833868	intron	enc +	chr3L	3834065	intron	enc +	chr3L_28_3830001	chr3L_3830001	RG6N_1-HE
1991	chr3L	4328669	4328672	chr3L	4336236	4336241	412	4	7568	1.5	9.5	5.5	0.6	7572	chr3L	4328669	intron	Cip4 -	chr3L	4332455	intron	Cip4 -	chr3L	4336241	intron	Cip4 -	chr3L_4_4330001	chr3L_4330001	RG6N_1-HE
1992	chr3L	4328674	4328751	chr3L	4336235	4336320	412	28	7567	1.5	9.5	5.5	4.3	7646	chr3L	4328674	intron	Cip4 -	chr3L	4332497	intron	Cip4 -	chr3L	4336320	intron	Cip4 -	chr3L_28_4330001	chr3L_4330001	RG6N_1-HE
2016	chr3L	4901082	4901131	chr3L	4907343	4907392	diver	8	6258	9.0	7.0	8.0	0.9	6310	chr3L	4901082	intergenic	CG13704 +	chr3L	4904237	intergenic	not near genes	chr3L	4907392	intergenic	not near genes	chr3L_8_4900001	chr3L_4900001	RG6N_1-HE
2022	chr3L	5034104	5034163	chr3L	5043327	5043386	roo	8	9220	8.5	8.5	8.5	0.8	9282	chr3L	5034104	intron	Con -	chr3L	5038745	intron	Con -	chr3L	5043386	intron	Con -	chr3L_8_5035001	chr3L_5035001	RG6N_1-HE
2023	chr3L	5034167	5034183	chr3L	5043314	5043323	roo	6	9193	6.5	8.0	7.2	0.7	9156	chr3L	5034167	intron	Con -	chr3L	5038745	intron	Con -	chr3L	5043323	intron	Con -	chr3L_6_5035001	chr3L_5035001	RG6N_1-HE
2024	chr3L	5045399	5045475	chr3L	5050248	5050327	Doc	17	4851	5.0	7.0	6.0	2.4	4928	chr3L	5045399	5` UTR	Con -	chr3L	5047863	intron	Con -	chr3L	5050327	intron	Con -	chr3L_17_5045001	chr3L_5045001	RG6N_1-HE
2037	chr3L	5299100	5299150	chr3L	5306607	5306657	Quasimodo	4	7507	5.0	2.0	3.5	0.9	7557	chr3L	5299100	intergenic	not near genes	chr3L	5302878	intergenic	not near genes	chr3L	5306657	intergenic	not near genes	chr3L_4_5300001	chr3L_5300001	RG6N_1-HE
2057	chr3L	5537662	5537752	chr3L	5538075	5538161	jockey	8	411	4.0	2.0	3.0	2.0	499	chr3L	5537662	intergenic	not near genes	chr3L	5537912	intergenic	CG10625 -	chr3L	5538161	intergenic	CG10625 -	chr3L_8_5535001	chr3L_5535001	RG6N_1-HE
2071	chr3L	5909973	5910056	chr3L	5910285	5910331	pogo	15	306	3.5	1.5	2.5	4.3	358	chr3L	5909973	intron	CG13288 +	chr3L	5910152	intron	CG13288 +	chr3L	5910331	intron	CG13288 +	chr3L_15_5910001	chr3L_5910001	RG6N_1-HE
2073	chr3L	5926304	5926334	chr3L	5926510	5926595	BS	6	247	6.5	6.5	6.5	0.8	291	chr3L	5926304	intron	Vap-33B +	chr3L	5926450	intron	Vap-33B +	chr3L	5926595	intron	Vap-33B +	chr3L_6_5925001	chr3L_5925001	RG6N_1-HE
2076	chr3L	6001640	6001696	chr3L	6004390	6004467	jockey	14	2766	4.0	2.5	3.2	3.3	2827	chr3L	6001640	intron	PVRAP +	chr3L	6003054	intron	PVRAP +	chr3L	6004467	intron	PVRAP +	chr3L_14_6000001	chr3L_6000001	RG6N_1-HE
2077	chr3L	6040309	6040387	chr3L	6042735	6042791	Doc	10	2424	3.5	11.0	7.2	1.2	2482	chr3L	6040309	intergenic	Jon65Aiv +	chr3L	6041550	intergenic	not near genes	chr3L	6042791	intergenic	not near genes	chr3L_10_6040001	chr3L_6040001	RG6N_1-HE
2084	chr3L	6220849	6220928	chr3L	6230072	6230151	roo	17	9220	3.5	5.5	4.5	3.1	9302	chr3L	6220849	5` UTR	pncr008:3L +	chr3L	6225500	intergenic	not near genes	chr3L	6230151	intergenic	not near genes	chr3L_17_6225001	chr3L_6225001	RG6N_1-HE
2088	chr3L	6334962	6334971	chr3L	6335493	6335512	297	4	536	23.5	9.5	16.5	0.2	550	chr3L	6334962	intron	CG13300 -	chr3L	6335237	intron	CG13300 -	chr3L	6335512	intron	CG13300 -	chr3L_4_6335001	chr3L_6335001	RG6N_1-HE
2089	chr3L	6334972	6335023	chr3L	6335492	6335564	297	31	534	12.0	9.0	10.5	2.7	592	chr3L	6334972	intron	CG13300 -	chr3L	6335268	intron	CG13300 -	chr3L	6335564	intron	CG13300 -	chr3L_31_6335001	chr3L_6335001	RG6N_1-HE
2092	chr3L	6405602	6405608	chr3L	6432138	6432144	roo	5	26536	2.5	12.5	7.5	0.6	26542	chr3L	6405602	intron	CG42747 +	chr3L	6418873	intron	CG42747 +	chr3L	6432144	intron	CG42747 +	chr3L_5_6415001	chr3L_6415001	RG6N_1-HE
2093	chr3L	6405610	6405658	chr3L	6432133	6432194	roo	19	26534	3.5	12.5	8.0	2.1	26584	chr3L	6405610	intron	CG42747 +	chr3L	6418902	intron	CG42747 +	chr3L	6432194	intron	CG42747 +	chr3L_19_6415001	chr3L_6415001	RG6N_1-HE
2098	chr3L	6620546	6620552	chr3L	6621057	6621057	Rt1c	5	509	14.5	12.0	13.2	0.4	511	chr3L	6620546	intergenic	not near genes	chr3L	6620802	intergenic	not near genes	chr3L	6621057	intergenic	not near genes	chr3L_5_6620001	chr3L_6620001	RG6N_1-HE
2099	chr3L	6620555	6620564	chr3L	6621055	6621075	Rt1c	7	509	12.5	12.0	12.2	0.5	520	chr3L	6620555	intergenic	not near genes	chr3L	6620815	intergenic	not near genes	chr3L	6621075	intergenic	not near genes	chr3L_7_6620001	chr3L_6620001	RG6N_1-HE
2100	chr3L	6620565	6620595	chr3L	6621054	6621095	Rt1c	29	503	9.0	12.0	10.5	2.5	530	chr3L	6620565	intergenic	not near genes	chr3L	6620830	intergenic	not near genes	chr3L	6621095	intergenic	not near genes	chr3L_29_6620001	chr3L_6620001	RG6N_1-HE
2105	chr3L	6781074	6781134	chr3L	6783169	6783229	Doc	24	2094	3.0	7.0	5.0	4.0	2155	chr3L	6781074	intergenic	not near genes	chr3L	6782152	intergenic	not near genes	chr3L	6783229	intergenic	not near genes	chr3L_24_6780001	chr3L_6780001	RG6N_1-HE
2110	chr3L	6855862	6855945	chr3L	6860715	6860763	Doc	7	4830	7.0	11.0	9.0	0.7	4901	chr3L	6855862	intergenic	not near genes	chr3L	6858312	intergenic	not near genes	chr3L	6860763	intergenic	not near genes	chr3L_7_6855001	chr3L_6855001	RG6N_1-HE
2112	chr3L	6887467	6887533	chr3L	6895026	6895108	roo	11	7562	8.0	0.0	4.0	2.2	7641	chr3L	6887467	intergenic	not near genes	chr3L	6891288	intergenic	not near genes	chr3L	6895108	intergenic	not near genes	chr3L_11_6890001	chr3L_6890001	RG6N_1-HE
2118	chr3L	6994837	6994899	chr3L	6995507	6995581	BS	10	679	0.0	14.0	7.0	1.2	744	chr3L	6994837	intergenic	bin +	chr3L	6995209	intergenic	not near genes	chr3L	6995581	intergenic	not near genes	chr3L_10_6995001	chr3L_6995001	RG6N_1-HE
2127	chr3L	7129900	7129977	chr3L	7130163	7130240	BS	6	263	0.0	4.5	2.2	1.9	340	chr3L	7129900	intergenic	CG15829 +	chr3L	7130070	intergenic	CG15829 +	chr3L	7130240	intergenic	not near genes	chr3L_6_7130001	chr3L_7130001	RG6N_1-HE
2140	chr3L	7377249	7377308	chr3L	7380425	7380485	297	15	3177	4.0	4.0	4.0	3.0	3236	chr3L	7377249	intron	SMSr -	chr3L	7378867	intron	SMSr -	chr3L	7380485	intron	SMSr -	chr3L_15_7375001	chr3L_7375001	RG6N_1-HE
2150	chr3L	7498702	7498770	chr3L	7503550	7503616	F-element	20	4847	11.5	11.5	11.5	1.6	4914	chr3L	7498702	5` UTR	CG8539 -	chr3L	7501159	intergenic	not near genes	chr3L	7503616	intergenic	not near genes	chr3L_20_7500001	chr3L_7500001	RG6N_1-HE
2164	chr3L	7793666	7793725	chr3L	7800778	7800848	297	26	7121	12.5	8.5	10.5	2.3	7182	chr3L	7793666	intron	CG32369 -	chr3L	7797257	intron	CG32369 -	chr3L	7800848	intron	CG32369 -	chr3L_26_7795001	chr3L_7795001	RG6N_1-HE
2169	chr3L	7886471	7886535	chr3L	7889043	7889124	Stalker4	17	2583	7.5	11.5	9.5	1.6	2653	chr3L	7886471	intron	CG32365 +	chr3L	7887798	intron	CG32365 +	chr3L	7889124	intron	CG32365 +	chr3L_17_7885001	chr3L_7885001	RG6N_1-HE
2170	chr3L	7916769	7916844	chr3L	7926011	7926086	roo	14	9241	6.5	6.5	6.5	1.9	9317	chr3L	7916769	3` UTR	syd -	chr3L	7921428	intron	syd -	chr3L	7926086	3` UTR	syd -	chr3L_14_7920001	chr3L_7920001	RG6N_1-HE
2173	chr3L	7985309	7985380	chr3L	7987703	7987779	NOF	17	2396	6.0	4.0	5.0	2.8	2470	chr3L	7985309	intron	nmo +	chr3L	7986544	intron	nmo +	chr3L	7987779	intron	nmo +	chr3L_17_7985001	chr3L_7985001	RG6N_1-HE
2174	chr3L	8019647	8019707	chr3L	8024121	8024191	NOF	7	4475	10.5	5.5	8.0	0.8	4544	chr3L	8019647	intron	nmo +	chr3L	8021919	intron	nmo +	chr3L	8024191	intron	nmo +	chr3L_7_8020001	chr3L_8020001	RG6N_1-HE
2181	chr3L	8233518	8233577	chr3L	8238853	8238910	Rt1a	25	5328	3.5	12.0	7.8	2.8	5392	chr3L	8233518	intron	CG7213 -	chr3L	8236214	intron	CG7213 -	chr3L	8238910	intron,intron	CG7213 -,Dscam4 +	chr3L_25_8235001	chr3L_8235001	RG6N_1-HE
2199	chr3L	8481754	8481795	chr3L	8490973	8491025	roo	8	9221	6.0	6.5	6.2	1.1	9271	chr3L	8481754	intron	CG43163 -	chr3L	8486390	intron	CG43163 -	chr3L	8491025	intron	CG43163 -	chr3L_8_8485001	chr3L_8485001	RG6N_1-HE
2200	chr3L	8498229	8498327	chr3L	8505764	8505802	blood	5	7519	0.0	2.0	1.0	2.5	7573	chr3L	8498229	intron	CG43163 -	chr3L	8502016	intron	CG43163 -	chr3L	8505802	intron	CG43163 -	chr3L_5_8500001	chr3L_8500001	RG6N_1-HE
2217	chr3L	8791212	8791302	chr3L	8796701	8796804	I-element	11	5494	5.0	0.0	2.5	3.1	5592	chr3L	8791212	exon	Fhos +	chr3L	8794008	intron	Fhos +	chr3L	8796804	intron	Fhos +	chr3L_11_8790001	chr3L_8790001	RG6N_1-HE
2235	chr3L	9076864	9076943	chr3L	9084495	9084573	412	32	7625	12.5	15.0	13.8	2.2	7709	chr3L	9076864	exon	Tequila +	chr3L	9080718	intron	Tequila +	chr3L	9084573	exon	Tequila +	chr3L_32_9080001	chr3L_9080001	RG6N_1-HE
2238	chr3L	9130502	9130566	chr3L	9134329	9134371	412	12	3819	7.5	7.5	7.5	1.4	3869	chr3L	9130502	intergenic	bol -	chr3L	9132436	intergenic	not near genes	chr3L	9134371	intergenic	Dhpr +	chr3L_12_9130001	chr3L_9130001	RG6N_1-HE
2239	chr3L	9164643	9164676	chr3L	9166180	9166198	hobo	7	1535	9.5	0.5	5.0	1.2	1555	chr3L	9164643	intron	Rdl -	chr3L	9165420	intron	Rdl -	chr3L	9166198	intron	Rdl -	chr3L_7_9165001	chr3L_9165001	RG6N_1-HE
2240	chr3L	9219190	9219266	chr3L	9219927	9219978	jockey	31	731	13.0	15.0	14.0	2.1	788	chr3L	9219190	intergenic	not near genes	chr3L	9219584	intergenic	not near genes	chr3L	9219978	intergenic	not near genes	chr3L_31_9215001	chr3L_9215001	RG6N_1-HE
2243	chr3L	9270556	9270649	chr3L	9278379	9278404	roo	10	7790	2.5	7.0	4.8	1.7	7848	chr3L	9270556	intron	GluRIB +	chr3L	9274480	intron	GluRIB +	chr3L	9278404	exon	GluRIB +	chr3L_10_9270001	chr3L_9270001	RG6N_1-HE
2250	chr3L	9392487	9392502	chr3L	9395369	9395394	Doc	6	2887	7.5	13.5	10.5	0.5	2907	chr3L	9392487	intron	CG4080 -	chr3L	9393940	intron	CG4080 -	chr3L	9395394	intron	CG4080 -	chr3L_6_9390001	chr3L_9390001	RG6N_1-HE
2257	chr3L	9443440	9443535	chr3L	9445305	9445373	S-element	6	1857	2.0	4.5	3.2	1.4	1933	chr3L	9443440	intron	CG33926 +	chr3L	9444406	intron	CG33926 +	chr3L	9445373	intron	CG33926 +	chr3L_6_9440001	chr3L_9440001	RG6N_1-HE
2258	chr3L	9501665	9501732	chr3L	9502211	9502264	roo	6	533	2.0	0.0	1.0	3.0	599	chr3L	9501665	intron	path -	chr3L	9501964	intron	path -	chr3L	9502264	intron	path -	chr3L_6_9500001	chr3L_9500001	RG6N_1-HE
2261	chr3L	9533715	9533730	chr3L	9541324	9541345	412	4	7622	17.5	15.5	16.5	0.2	7630	chr3L	9533715	intergenic	not near genes	chr3L	9537530	intergenic	not near genes	chr3L	9541345	intergenic	not near genes	chr3L_4_9535001	chr3L_9535001	RG6N_1-HE
2262	chr3L	9533731	9533784	chr3L	9541322	9541377	412	18	7600	8.0	14.5	11.2	1.5	7646	chr3L	9533731	intergenic	not near genes	chr3L	9537554	intergenic	not near genes	chr3L	9541377	intergenic	not near genes	chr3L_18_9535001	chr3L_9535001	RG6N_1-HE
2265	chr3L	9571845	9571939	chr3L	9572264	9572351	jockey	15	415	11.0	0.0	5.5	2.3	506	chr3L	9571845	intron	CG42673 +	chr3L	9572098	intron	CG42673 +	chr3L	9572351	intron	CG42673 +	chr3L_15_9570001	chr3L_9570001	RG6N_1-HE
2266	chr3L	9575852	9575882	chr3L	9580995	9581005	jockey	8	5142	38.0	13.5	25.8	0.3	5153	chr3L	9575852	intron	CG42673 +	chr3L	9578428	intron	CG42673 +	chr3L	9581005	intron	CG42673 +	chr3L_8_9575001	chr3L_9575001	RG6N_1-HE
2267	chr3L	9575888	9575929	chr3L	9580989	9581076	jockey	26	5138	23.0	12.5	17.8	1.4	5188	chr3L	9575888	intron	CG42673 +	chr3L	9578482	intron	CG42673 +	chr3L	9581076	intron	CG42673 +	chr3L_26_9575001	chr3L_9575001	RG6N_1-HE
2279	chr3L	9929607	9929688	chr3L	9938453	9938532	roo	28	8847	17.5	9.0	13.2	2.0	8925	chr3L	9929607	intron	CG34356 +	chr3L	9934070	intron	CG34356 +	chr3L	9938532	intron	CG34356 +	chr3L_28_9930001	chr3L_9930001	RG6N_1-HE
2289	chr3L	10060081	10060117	chr3L	10067709	10067771	17.6	17	7650	18.0	12.5	15.2	1.0	7690	chr3L	10060081	intron	dpr6 +	chr3L	10063926	intron	dpr6 +	chr3L	10067771	intron	dpr6 +	chr3L_17_10060001	chr3L_10060001	RG6N_1-HE
2304	chr3L	10414876	10414977	chr3L	10417316	10417328	Doc	19	2433	3.0	10.5	6.8	2.4	2452	chr3L	10414876	intergenic	CG12362 +	chr3L	10416102	intergenic	not near genes	chr3L	10417328	intergenic	not near genes	chr3L_19_10415001	chr3L_10415001	RG6N_1-HE
2339	chr3L	11087002	11087014	chr3L	11088869	11088877	S-element	6	1870	7.5	5.5	6.5	0.8	1875	chr3L	11087002	intron	JIL-1 -	chr3L	11087940	intron	JIL-1 -	chr3L	11088877	intron	JIL-1 -	chr3L_6_11085001	chr3L_11085001	RG6N_1-HE
2340	chr3L	11087023	11087074	chr3L	11088865	11088933	S-element	9	1855	0.0	5.0	2.5	2.6	1910	chr3L	11087023	intron	JIL-1 -	chr3L	11087978	intron	JIL-1 -	chr3L	11088933	intron	JIL-1 -	chr3L_9_11085001	chr3L_11085001	RG6N_1-HE
2343	chr3L	11105246	11105311	chr3L	11107020	11107070	X-element	12	1775	1.5	5.0	3.2	2.9	1824	chr3L	11105246	intergenic	not near genes	chr3L	11106158	intergenic	not near genes	chr3L	11107070	exon	CG32073 -	chr3L_12_11105001	chr3L_11105001	RG6N_1-HE
2350	chr3L	11264427	11264473	chr3L	11271433	11271498	17.6	7	7020	1.5	3.0	2.2	2.2	7071	chr3L	11264427	intergenic	not near genes	chr3L	11267962	intergenic	not near genes	chr3L	11271498	intergenic	not near genes	chr3L_7_11265001	chr3L_11265001	RG6N_1-HE
2352	chr3L	11329648	11329718	chr3L	11332924	11332988	jockey	14	3269	5.0	8.0	6.5	1.9	3340	chr3L	11329648	intergenic	not near genes	chr3L	11331318	intergenic	not near genes	chr3L	11332988	intergenic	not near genes	chr3L_14_11330001	chr3L_11330001	RG6N_1-HE
2371	chr3L	11723027	11723104	chr3L	11727893	11727970	Doc	31	4864	9.0	7.0	8.0	3.4	4943	chr3L	11723027	3` UTR	Bmcp +	chr3L	11725498	intron	Bmcp +	chr3L	11727970	3` UTR	Bmcp +	chr3L_31_11725001	chr3L_11725001	RG6N_1-HE
2384	chr3L	11864509	11864533	chr3L	11865857	11865899	pogo	11	1357	26.5	19.0	22.8	0.5	1390	chr3L	11864509	intron	CG44837 -	chr3L	11865204	intron	CG44837 -	chr3L	11865899	intron	CG44837 -	chr3L_11_11865001	chr3L_11865001	RG6N_1-HE
2385	chr3L	11864535	11864573	chr3L	11865849	11865939	pogo	27	1354	14.5	16.0	15.2	1.7	1404	chr3L	11864535	intron	CG44837 -	chr3L	11865237	intron	CG44837 -	chr3L	11865939	intron	CG44837 -	chr3L_27_11865001	chr3L_11865001	RG6N_1-HE
2433	chr3L	12874870	12874881	chr3L	12877233	12877244	jockey	4	2363	14.0	8.5	11.2	0.3	2374	chr3L	12874870	intergenic	not near genes	chr3L	12876057	intergenic	not near genes	chr3L	12877244	intergenic	not near genes	chr3L_4_12875001	chr3L_12875001	RG6N_1-HE
2434	chr3L	12874887	12874944	chr3L	12877225	12877307	jockey	15	2360	5.0	7.0	6.0	2.1	2420	chr3L	12874887	intergenic	not near genes	chr3L	12876097	intergenic	not near genes	chr3L	12877307	intergenic	not near genes	chr3L_15_12875001	chr3L_12875001	RG6N_1-HE
2436	chr3L	12919213	12919262	chr3L	12924757	12924769	Rt1c	8	5524	7.0	2.5	4.8	1.4	5556	chr3L	12919213	intergenic	not near genes	chr3L	12921991	intergenic	not near genes	chr3L	12924769	intergenic	not near genes	chr3L_8_12920001	chr3L_12920001	RG6N_1-HE
2437	chr3L	12957734	12957810	chr3L	12962276	12962327	copia	28	4545	6.5	11.0	8.8	2.9	4593	chr3L	12957734	intergenic	not near genes	chr3L	12960030	intergenic	not near genes	chr3L	12962327	intergenic	not near genes	chr3L_28_12960001	chr3L_12960001	RG6N_1-HE
2470	chr3L	13525105	13525141	chr3L	13532972	13533001	roo	10	7865	16.0	9.0	12.5	0.7	7896	chr3L	13525105	intergenic	not near genes	chr3L	13529053	intergenic	not near genes	chr3L	13533001	intergenic	not near genes	chr3L_10_13525001	chr3L_13525001	RG6N_1-HE
2471	chr3L	13525144	13525177	chr3L	13532969	13533044	roo	10	7851	10.5	8.5	9.5	1.0	7900	chr3L	13525144	intergenic	not near genes	chr3L	13529094	intergenic	not near genes	chr3L	13533044	intergenic	not near genes	chr3L_10_13525001	chr3L_13525001	RG6N_1-HE
2473	chr3L	13574568	13574620	chr3L	13580149	13580182	Rt1c	12	5572	15.5	8.0	11.8	0.9	5614	chr3L	13574568	intron	bru-3 -	chr3L	13577375	intron	bru-3 -	chr3L	13580182	intron	bru-3 -	chr3L_12_13575001	chr3L_13575001	RG6N_1-HE
2484	chr3L	13804486	13804568	chr3L	13822843	13822901	roo	58	18350	21.5	18.0	19.8	2.8	18415	chr3L	13804486	intergenic	not near genes	chr3L	13813694	intergenic	not near genes	chr3L	13822901	intergenic	not near genes	chr3L_58_13810001	chr3L_13810001	RG6N_1-HE
2506	chr3L	14267340	14267397	chr3L	14271815	14272069	F-element	20	4659	11.0	0.0	5.5	3.1	4729	chr3L	14267340	intergenic	not near genes	chr3L	14269704	intergenic	not near genes	chr3L	14272069	intergenic	not near genes	chr3L_20_14265001	chr3L_14265001	RG6N_1-HE
2512	chr3L	14295922	14295942	chr3L	14296474	14296498	roo	7	551	31.0	10.5	20.8	0.3	576	chr3L	14295922	intron	fz +	chr3L	14296210	intron	fz +	chr3L	14296498	intron	fz +	chr3L_7_14295001	chr3L_14295001	RG6N_1-HE
2513	chr3L	14295943	14295950	chr3L	14296473	14296500	roo	8	546	29.0	10.0	19.5	0.4	557	chr3L	14295943	intron	fz +	chr3L	14296222	intron	fz +	chr3L	14296500	intron	fz +	chr3L_8_14295001	chr3L_14295001	RG6N_1-HE
2514	chr3L	14295951	14295991	chr3L	14296472	14296548	roo	26	548	21.5	10.0	15.8	1.5	597	chr3L	14295951	intron	fz +	chr3L	14296250	intron	fz +	chr3L	14296548	intron	fz +	chr3L_26_14295001	chr3L_14295001	RG6N_1-HE
2515	chr3L	14295992	14295997	chr3L	14296467	14296554	roo	7	541	21.5	8.0	14.8	0.4	562	chr3L	14295992	intron	fz +	chr3L	14296273	intron	fz +	chr3L	14296554	intron	fz +	chr3L_7_14295001	chr3L_14295001	RG6N_1-HE
2519	chr3L	14311989	14312017	chr3L	14316863	14316884	X-element	11	4873	17.0	0.5	8.8	1.1	4895	chr3L	14311989	exon	fz +	chr3L	14314436	intron	fz +	chr3L	14316884	intron	fz +	chr3L_11_14310001	chr3L_14310001	RG6N_1-HE
2520	chr3L	14312022	14312034	chr3L	14316856	14316903	X-element	6	4854	10.0	0.5	5.2	1.0	4881	chr3L	14312022	exon	fz +	chr3L	14314462	intron	fz +	chr3L	14316903	intron	fz +	chr3L_6_14310001	chr3L_14310001	RG6N_1-HE
2534	chr3L	14468392	14468464	chr3L	14473669	14473683	copia	37	5273	11.0	21.5	16.2	2.2	5291	chr3L	14468392	intron	bbg -	chr3L	14471038	intron	bbg -	chr3L	14473683	intron	bbg -	chr3L_37_14470001	chr3L_14470001	RG6N_1-HE
2538	chr3L	14524261	14524345	chr3L	14529094	14529175	F-element	9	4832	6.0	6.5	6.2	1.2	4914	chr3L	14524261	intron	bbg -	chr3L	14526718	intron	bbg -	chr3L	14529175	intron	bbg -	chr3L_9_14525001	chr3L_14525001	RG6N_1-HE
2547	chr3L	14721133	14721200	chr3L	14723040	14723107	Rt1c	19	1900	3.0	7.5	5.2	3.1	1974	chr3L	14721133	intron	ome +	chr3L	14722120	intron	ome +	chr3L	14723107	intron	ome +	chr3L_19_14720001	chr3L_14720001	RG6N_1-HE
2549	chr3L	14725537	14725612	chr3L	14728616	14728677	Doc	13	3062	0.0	10.0	5.0	2.2	3140	chr3L	14725537	intron	ome +	chr3L	14727107	intron	ome +	chr3L	14728677	intron	ome +	chr3L_13_14725001	chr3L_14725001	RG6N_1-HE
2562	chr3L	14954318	14954391	chr3L	14956039	14956120	transib2	14	1738	7.0	6.5	6.8	1.8	1802	chr3L	14954318	intergenic	not near genes	chr3L	14955219	intergenic	not near genes	chr3L	14956120	intergenic	not near genes	chr3L_14_14955001	chr3L_14955001	RG6N_1-HE
2570	chr3L	15084995	15085075	chr3L	15086232	15086291	1360	11	1228	4.5	5.0	4.8	1.9	1296	chr3L	15084995	intron	cp309 -	chr3L	15085643	intron	cp309 -	chr3L	15086291	intron	cp309 -	chr3L_11_15085001	chr3L_15085001	RG6N_1-HE
2579	chr3L	15295701	15295784	chr3L	15298614	15298698	gypsy5	30	2912	11.0	6.5	8.8	3.1	2997	chr3L	15295701	intergenic	not near genes	chr3L	15297200	intergenic	not near genes	chr3L	15298698	intergenic	Best4 +	chr3L_30_15295001	chr3L_15295001	RG6N_1-HE
2584	chr3L	15423696	15423774	chr3L	15426611	15426689	opus	25	2914	8.0	4.5	6.2	3.5	2993	chr3L	15423696	intergenic	not near genes	chr3L	15425192	intergenic	not near genes	chr3L	15426689	intergenic	not near genes	chr3L_25_15425001	chr3L_15425001	RG6N_1-HE
2593	chr3L	15554866	15554881	chr3L	15556724	15556739	S-element	4	1858	13.5	5.0	9.2	0.4	1873	chr3L	15554866	intron	AGO2 +	chr3L	15555802	intron	AGO2 +	chr3L	15556739	intron	AGO2 +	chr3L_4_15555001	chr3L_15555001	RG6N_1-HE
2594	chr3L	15554889	15554942	chr3L	15556723	15556800	S-element	15	1855	2.5	5.0	3.8	3.1	1911	chr3L	15554889	intron	AGO2 +	chr3L	15555844	intron	AGO2 +	chr3L	15556800	intron	AGO2 +	chr3L_15_15555001	chr3L_15555001	RG6N_1-HE
2615	chr3L	15899210	15899243	chr3L	15899794	15899866	jockey	10	604	8.0	6.0	7.0	1.2	656	chr3L	15899210	intergenic	pHCl -	chr3L	15899538	intergenic	not near genes	chr3L	15899866	intergenic	sff -	chr3L_10_15895001	chr3L_15895001	RG6N_1-HE
2619	chr3L	15929172	15929227	chr3L	15938390	15938441	roo	14	9217	4.5	5.0	4.8	2.4	9269	chr3L	15929172	intron	Pka-C3 -	chr3L	15933806	intron	Pka-C3 -	chr3L	15938441	intron	Pka-C3 -	chr3L_14_15930001	chr3L_15930001	RG6N_1-HE
2634	chr3L	16184041	16184049	chr3L	16188931	16188939	X-element	5	4890	22.5	11.5	17.0	0.3	4898	chr3L	16184041	intergenic	not near genes	chr3L	16186490	intergenic	not near genes	chr3L	16188939	intergenic	not near genes	chr3L_5_16185001	chr3L_16185001	RG6N_1-HE
2635	chr3L	16184056	16184131	chr3L	16188925	16189016	X-element	24	4886	6.0	11.0	8.5	2.5	4960	chr3L	16184056	intergenic	not near genes	chr3L	16186536	intergenic	not near genes	chr3L	16189016	intergenic	not near genes	chr3L_24_16185001	chr3L_16185001	RG6N_1-HE
2647	chr3L	16443776	16443871	chr3L	16446187	16446276	Doc	54	2408	19.0	22.5	20.8	2.5	2500	chr3L	16443776	intron,intron	CG33158 +,dsx-c73A -	chr3L	16445026	intron,intron	CG33158 +,dsx-c73A -	chr3L	16446276	intron,intron	CG33158 +,dsx-c73A -	chr3L_54_16445001	chr3L_16445001	RG6N_1-HE
2653	chr3L	16493918	16493943	chr3L	16494506	16494531	jockey	22	586	41.5	21.5	31.5	0.7	613	chr3L	16493918	intron,exon,intron	CG33158 +,CG42514 -,CG43373 -	chr3L	16494224	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L	16494531	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L_22_16490001	chr3L_16490001	RG6N_1-HE
2654	chr3L	16493945	16493968	chr3L	16494500	16494556	jockey	25	580	32.5	21.0	26.8	0.9	611	chr3L	16493945	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L	16494250	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L	16494556	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L_25_16490001	chr3L_16490001	RG6N_1-HE
2655	chr3L	16493969	16494008	chr3L	16494498	16494554	jockey	29	575	15.0	20.0	17.5	1.6	585	chr3L	16493969	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L	16494262	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L	16494554	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L_29_16490001	chr3L_16490001	RG6N_1-HE
2663	chr3L	16616461	16616507	chr3L	16621860	16621906	297	6	5398	2.0	2.5	2.2	1.9	5445	chr3L	16616461	3` UTR	Abl -	chr3L	16619184	3` UTR	Abl -	chr3L	16621906	3` UTR	Abl -	chr3L_6_16615001	chr3L_16615001	RG6N_1-HE
2669	chr3L	16683959	16684030	chr3L	16689251	16689321	copia	10	5291	3.0	19.0	11.0	0.8	5362	chr3L	16683959	intron,intron	Lasp -,CG43954 -	chr3L	16686640	intron,intron	Lasp -,CG43954 -	chr3L	16689321	intron,intron,5` UTR	Lasp -,CG43954 -,CR45179 +	chr3L_10_16685001	chr3L_16685001	RG6N_1-HE
2687	chr3L	16945674	16945754	chr3L	16954887	16954946	roo	31	9208	12.5	15.5	14.0	2.1	9272	chr3L	16945674	exon	Obp73a +	chr3L	16950310	intergenic	not near genes	chr3L	16954946	5` UTR	Nc73EF +	chr3L_31_16950001	chr3L_16950001	RG6N_1-HE
2689	chr3L	17034873	17034953	chr3L	17035128	17035212	G2	5	257	3.5	6.5	5.0	0.8	339	chr3L	17034873	intergenic	not near genes	chr3L	17035042	intergenic	not near genes	chr3L	17035212	intergenic	beg +	chr3L_5_17035001	chr3L_17035001	RG6N_1-HE
2690	chr3L	17084946	17084960	chr3L	17094165	17094171	roo	7	9215	34.0	18.5	26.2	0.3	9225	chr3L	17084946	intron	Rbp6 -	chr3L	17089558	intron	Rbp6 -	chr3L	17094171	intron	Rbp6 -	chr3L_7_17085001	chr3L_17085001	RG6N_1-HE
2691	chr3L	17084961	17085021	chr3L	17094160	17094241	roo	24	9217	21.5	17.0	19.2	1.2	9280	chr3L	17084961	intron	Rbp6 -	chr3L	17089601	intron	Rbp6 -	chr3L	17094241	intron	Rbp6 -	chr3L_24_17085001	chr3L_17085001	RG6N_1-HE
2708	chr3L	17516922	17516942	chr3L	17524549	17524557	412	6	7621	16.0	9.0	12.5	0.4	7635	chr3L	17516922	intron	CG7564 +	chr3L	17520740	intron	CG7564 +	chr3L	17524557	3` UTR	CG7564 +	chr3L_6_17520001	chr3L_17520001	RG6N_1-HE
2709	chr3L	17516948	17516995	chr3L	17524539	17524615	412	12	7614	8.0	6.5	7.2	1.5	7667	chr3L	17516948	intron	CG7564 +	chr3L	17520782	intron	CG7564 +	chr3L	17524615	3` UTR	CG7564 +	chr3L_12_17520001	chr3L_17520001	RG6N_1-HE
2718	chr3L	17730803	17730869	chr3L	17738198	17738270	mdg1	5	7399	5.0	4.0	4.5	0.9	7467	chr3L	17730803	intron	Ccn +	chr3L	17734536	intron	Ccn +	chr3L	17738270	intron	Ccn +	chr3L_5_17730001	chr3L_17730001	RG6N_1-HE
2727	chr3L	17799755	17799833	chr3L	17801613	17801680	S-element	18	1856	5.0	6.0	5.5	2.8	1925	chr3L	17799755	intron	NUCB1 -	chr3L	17800718	intron	NUCB1 -	chr3L	17801680	intron	NUCB1 -	chr3L_18_17800001	chr3L_17800001	RG6N_1-HE
2734	chr3L	17918335	17918384	chr3L	17921207	17921257	opus	4	2869	6.0	4.5	5.2	0.6	2922	chr3L	17918335	intergenic	not near genes	chr3L	17919796	intergenic	not near genes	chr3L	17921257	intergenic	not near genes	chr3L_4_17915001	chr3L_17915001	RG6N_1-HE
2737	chr3L	18047649	18047663	chr3L	18056776	18056790	roo	4	9127	0.5	2.0	1.2	1.8	9141	chr3L	18047649	intron	Eip75B -	chr3L	18052220	intron	Eip75B -	chr3L	18056790	intron	Eip75B -	chr3L_4_18050001	chr3L_18050001	RG6N_1-HE
2738	chr3L	18047673	18047722	chr3L	18056768	18056849	roo	7	9122	0.5	2.0	1.2	3.2	9176	chr3L	18047673	intron	Eip75B -	chr3L	18052261	intron	Eip75B -	chr3L	18056849	intron	Eip75B -	chr3L_7_18050001	chr3L_18050001	RG6N_1-HE
2772	chr3L	18506090	18506152	chr3L	18509608	18509659	F-element	19	3528	8.0	12.5	10.2	1.7	3569	chr3L	18506090	intergenic	not near genes	chr3L	18507874	intergenic	not near genes	chr3L	18509659	intergenic	not near genes	chr3L_19_18505001	chr3L_18505001	RG6N_1-HE
2773	chr3L	18514851	18514875	chr3L	18520113	18520116	BS	16	5260	15.5	13.5	14.5	1.0	5265	chr3L	18514851	intergenic	not near genes	chr3L	18517484	intergenic	not near genes	chr3L	18520116	intergenic	not near genes	chr3L_16_18515001	chr3L_18515001	RG6N_1-HE
2774	chr3L	18514881	18514919	chr3L	18520106	18520181	BS	25	5256	11.5	12.0	11.8	2.0	5300	chr3L	18514881	intergenic	not near genes	chr3L	18517531	intergenic	not near genes	chr3L	18520181	intergenic	not near genes	chr3L_25_18515001	chr3L_18515001	RG6N_1-HE
2775	chr3L	18528571	18528630	chr3L	18537826	18537885	roo	34	9254	11.5	0.0	5.8	5.0	9314	chr3L	18528571	intergenic	not near genes	chr3L	18533228	intergenic	not near genes	chr3L	18537885	intergenic	not near genes	chr3L_34_18530001	chr3L_18530001	RG6N_1-HE
2780	chr3L	18593887	18593976	chr3L	18595938	18595993	Doc	18	2047	7.5	3.5	5.5	2.8	2106	chr3L	18593887	intergenic	term -	chr3L	18594940	intergenic	not near genes	chr3L	18595993	intergenic	CR45389 +	chr3L_18_18590001	chr3L_18590001	RG6N_1-HE
2786	chr3L	18710698	18710752	chr3L	18718721	18718775	Stalker2	27	8022	17.5	9.0	13.2	1.9	8077	chr3L	18710698	intergenic	not near genes	chr3L	18714736	intergenic	not near genes	chr3L	18718775	intergenic	not near genes	chr3L_27_18710001	chr3L_18710001	RG6N_1-HE
2787	chr3L	18710756	18710781	chr3L	18718778	18718804	Stalker2	16	8022	12.0	21.5	16.8	0.9	8048	chr3L	18710756	intergenic	not near genes	chr3L	18714780	intergenic	not near genes	chr3L	18718804	intergenic	not near genes	chr3L_16_18710001	chr3L_18710001	RG6N_1-HE
2791	chr3L	18772352	18772431	chr3L	18781103	18781164	roo	34	8750	10.0	7.5	8.8	3.5	8812	chr3L	18772352	intron	ftz-f1 -	chr3L	18776758	intron	ftz-f1 -	chr3L	18781164	intron	ftz-f1 -	chr3L_34_18775001	chr3L_18775001	RG6N_1-HE
2793	chr3L	18833723	18833794	chr3L	18834958	18835029	1360	21	1233	8.5	10.0	9.2	2.1	1306	chr3L	18833723	intron	Indy -	chr3L	18834376	intron	Indy -	chr3L	18835029	intron	Indy -	chr3L_21_18830001	chr3L_18830001	RG6N_1-HE
2810	chr3L	19008781	19008818	chr3L	19009189	19009217	jockey	9	402	28.5	17.5	23.0	0.4	436	chr3L	19008781	intron	nkd -	chr3L	19008999	intron	nkd -	chr3L	19009217	intron	nkd -	chr3L_9_19005001	chr3L_19005001	RG6N_1-HE
2811	chr3L	19008825	19008838	chr3L	19009187	19009215	jockey	7	382	23.5	17.0	20.2	0.3	390	chr3L	19008825	intron	nkd -	chr3L	19009020	intron	nkd -	chr3L	19009215	intron	nkd -	chr3L_7_19005001	chr3L_19005001	RG6N_1-HE
2812	chr3L	19008839	19008860	chr3L	19009185	19009215	jockey	5	369	20.0	16.5	18.2	0.3	376	chr3L	19008839	intron	nkd -	chr3L	19009027	intron	nkd -	chr3L	19009215	intron	nkd -	chr3L_5_19005001	chr3L_19005001	RG6N_1-HE
2819	chr3L	19115599	19115641	chr3L	19115829	19115833	BS	10	226	10.0	8.0	9.0	1.0	234	chr3L	19115599	intron	CG14082 -	chr3L	19115716	intron	CG14082 -	chr3L	19115833	intron	CG14082 -	chr3L_10_19115001	chr3L_19115001	RG6N_1-HE
2820	chr3L	19115645	19115656	chr3L	19115818	19115873	BS	4	208	8.0	5.0	6.5	0.5	228	chr3L	19115645	intron	CG14082 -	chr3L	19115759	intron	CG14082 -	chr3L	19115873	intron	CG14082 -	chr3L_4_19115001	chr3L_19115001	RG6N_1-HE
2821	chr3L	19117003	19117064	chr3L	19124500	19124575	mdg1	20	7507	13.5	7.5	10.5	1.7	7572	chr3L	19117003	intron	CG14082 -	chr3L	19120789	intron	CG14082 -	chr3L	19124575	intron	CG14082 -	chr3L_20_19120001	chr3L_19120001	RG6N_1-HE
2826	chr3L	19207998	19208037	chr3L	19209441	19209474	Doc	15	1439	23.0	8.5	15.8	0.9	1476	chr3L	19207998	intron	fz2 -	chr3L	19208736	intron	fz2 -	chr3L	19209474	intron	fz2 -	chr3L_15_19205001	chr3L_19205001	RG6N_1-HE
2827	chr3L	19208041	19208080	chr3L	19209440	19209504	Doc	10	1423	9.5	8.0	8.8	1.0	1463	chr3L	19208041	intron	fz2 -	chr3L	19208772	intron	fz2 -	chr3L	19209504	intron	fz2 -	chr3L_10_19205001	chr3L_19205001	RG6N_1-HE
2836	chr3L	19398887	19398932	chr3L	19403661	19403720	F-element	20	4779	8.5	10.5	9.5	1.9	4833	chr3L	19398887	intron	CG32206 -	chr3L	19401304	intron	CG32206 -	chr3L	19403720	intron	CG32206 -	chr3L_20_19400001	chr3L_19400001	RG6N_1-HE
2848	chr3L	19820227	19820319	chr3L	19827847	19827939	412	33	7619	3.0	6.5	4.8	5.7	7712	chr3L	19820227	intron	Deaf1 +	chr3L	19824083	intron	Deaf1 +	chr3L	19827939	intron	Deaf1 +	chr3L_33_19820001	chr3L_19820001	RG6N_1-HE
2849	chr3L	19848488	19848523	chr3L	19857734	19857785	roo	6	9256	5.0	5.0	5.0	1.0	9297	chr3L	19848488	intron	Papss +	chr3L	19853136	intron	Papss +	chr3L	19857785	intron	Papss +	chr3L_6_19850001	chr3L_19850001	RG6N_1-HE
2850	chr3L	19861767	19861831	chr3L	19863616	19863652	S-element	7	1842	2.0	1.5	1.8	2.5	1885	chr3L	19861767	5` UTR	CR45433 +	chr3L	19862710	intergenic	not near genes	chr3L	19863652	intergenic	not near genes	chr3L_7_19860001	chr3L_19860001	RG6N_1-HE
2862	chr3L	20113625	20113667	chr3L	20122918	20122995	roo	9	9324	4.5	5.5	5.0	1.5	9370	chr3L	20113625	intergenic	not near genes	chr3L	20118310	intergenic	not near genes	chr3L	20122995	intergenic	not near genes	chr3L_9_20115001	chr3L_20115001	RG6N_1-HE
2865	chr3L	20212550	20212576	chr3L	20218198	20218223	mdg3	6	5648	7.0	3.5	5.2	1.0	5673	chr3L	20212550	intergenic	CG7017 -	chr3L	20215386	intergenic	not near genes	chr3L	20218223	intergenic	CG6933 -	chr3L_6_20215001	chr3L_20215001	RG6N_1-HE
2866	chr3L	20257273	20257359	chr3L	20258461	20258504	pogo	33	1187	8.0	10.5	9.2	3.2	1231	chr3L	20257273	intron	rdgC +	chr3L	20257888	intron	rdgC +	chr3L	20258504	intron	rdgC +	chr3L_33_20255001	chr3L_20255001	RG6N_1-HE
2876	chr3L	20476709	20476770	chr3L	20484379	20484440	springer	13	7667	5.5	6.5	6.0	1.9	7731	chr3L	20476709	3` UTR	isoQC +	chr3L	20480574	intergenic	not near genes	chr3L	20484440	3` UTR	ZnT77C -	chr3L_13_20480001	chr3L_20480001	RG6N_1-HE
2877	chr3L	20487607	20487674	chr3L	20488129	20488194	INE-1	25	515	5.5	7.5	6.5	3.3	587	chr3L	20487607	intron	ZnT77C -	chr3L	20487900	intron	ZnT77C -	chr3L	20488194	exon	ZnT77C -	chr3L_25_20485001	chr3L_20485001	RG6N_1-HE
2882	chr3L	20590009	20590016	chr3L	20590618	20590622	412	6	609	42.0	18.5	30.2	0.2	613	chr3L	20590009	intergenic	not near genes	chr3L	20590316	intergenic	not near genes	chr3L	20590622	intergenic	not near genes	chr3L_6_20590001	chr3L_20590001	RG6N_1-HE
2883	chr3L	20590022	20590038	chr3L	20590610	20590637	412	13	598	34.0	15.5	24.8	0.5	615	chr3L	20590022	intergenic	not near genes	chr3L	20590330	intergenic	not near genes	chr3L	20590637	intergenic	not near genes	chr3L_13_20590001	chr3L_20590001	RG6N_1-HE
2884	chr3L	20590039	20590076	chr3L	20590605	20590686	412	31	589	24.0	15.0	19.5	1.5	647	chr3L	20590039	intergenic	not near genes	chr3L	20590362	intergenic	not near genes	chr3L	20590686	intergenic	not near genes	chr3L_31_20590001	chr3L_20590001	RG6N_1-HE
2885	chr3L	20590079	20590091	chr3L	20590601	20590670	412	7	576	20.0	15.0	17.5	0.4	591	chr3L	20590079	intergenic	not near genes	chr3L	20590374	intergenic	not near genes	chr3L	20590670	intergenic	not near genes	chr3L_7_20590001	chr3L_20590001	RG6N_1-HE
2891	chr3L	20821237	20821292	chr3L	20824768	20824824	NOF	13	3538	3.5	7.0	5.2	2.1	3587	chr3L	20821237	intron	Pka-R1 +	chr3L	20823030	intron	Pka-R1 +	chr3L	20824824	intron	Pka-R1 +	chr3L_13_20820001	chr3L_20820001	RG6N_1-HE
2896	chr3L	21014855	21014864	chr3L	21023404	21023409	Tirant	7	8546	46.0	25.0	35.5	0.2	8554	chr3L	21014855	intron	skd -	chr3L	21019132	intron	skd -	chr3L	21023409	intron	skd -	chr3L_7_21015001	chr3L_21015001	RG6N_1-HE
2897	chr3L	21014867	21014892	chr3L	21023403	21023436	Tirant	15	8534	30.0	25.0	27.5	0.5	8569	chr3L	21014867	intron	skd -	chr3L	21019152	intron	skd -	chr3L	21023436	intron	skd -	chr3L_15_21015001	chr3L_21015001	RG6N_1-HE
2898	chr3L	21014894	21014944	chr3L	21023402	21023472	Tirant	34	8524	11.0	25.0	18.0	1.8	8578	chr3L	21014894	intron	skd -	chr3L	21019183	intron	skd -	chr3L	21023472	intron	skd -	chr3L_34_21015001	chr3L_21015001	RG6N_1-HE
2900	chr3L	21151806	21151815	chr3L	21156961	21156970	flea	4	5155	17.5	8.0	12.8	0.3	5164	chr3L	21151806	intron	Ac78C -	chr3L	21154388	intron	Ac78C -	chr3L	21156970	intron	Ac78C -	chr3L_4_21150001	chr3L_21150001	RG6N_1-HE
2901	chr3L	21151816	21151890	chr3L	21156950	21157014	flea	20	5150	6.5	6.0	6.2	2.8	5198	chr3L	21151816	intron	Ac78C -	chr3L	21154415	intron	Ac78C -	chr3L	21157014	intron	Ac78C -	chr3L_20_21150001	chr3L_21150001	RG6N_1-HE
2906	chr3L	21306089	21306167	chr3L	21315319	21315397	roo	10	9228	7.5	8.5	8.0	1.1	9308	chr3L	21306089	3` UTR	CG7632 +	chr3L	21310743	intron	Pc -	chr3L	21315397	3` UTR	Pc -	chr3L_10_21310001	chr3L_21310001	RG6N_1-HE
2907	chr3L	21361664	21361704	chr3L	21362689	21362729	G2	4	1025	7.0	5.0	6.0	0.6	1065	chr3L	21361664	intergenic	CG32440 +	chr3L	21362196	intergenic	not near genes	chr3L	21362729	intergenic	not near genes	chr3L_4_21360001	chr3L_21360001	RG6N_1-HE
2908	chr3L	21372673	21372742	chr3L	21379251	21379319	McClintock	9	6578	3.0	9.0	6.0	1.3	6646	chr3L	21372673	intergenic	not near genes	chr3L	21375996	intergenic	not near genes	chr3L	21379319	intergenic	not near genes	chr3L_9_21375001	chr3L_21375001	RG6N_1-HE
2912	chr3L	21498780	21498847	chr3L	21500483	21500526	1360	12	1690	9.0	11.5	10.2	1.1	1746	chr3L	21498780	5` UTR,intron	CR43933 +,Glg1 -	chr3L	21499653	intron	Glg1 -	chr3L	21500526	intron	Glg1 -	chr3L_12_21495001	chr3L_21495001	RG6N_1-HE
2913	chr3L	21501132	21501155	chr3L	21501290	21501319	1360	10	164	5.0	15.5	10.2	0.9	187	chr3L	21501132	intron	Glg1 -	chr3L	21501226	intron	Glg1 -	chr3L	21501319	intron	Glg1 -	chr3L_10_21500001	chr3L_21500001	RG6N_1-HE
2916	chr3L	21749290	21749343	chr3L	21754503	21754574	Doc	9	5223	6.0	11.0	8.5	0.9	5284	chr3L	21749290	intron	Syn1 -	chr3L	21751932	intron	Syn1 -	chr3L	21754574	intron	Syn1 -	chr3L_9_21750001	chr3L_21750001	RG6N_1-HE
2931	chr3L	22099615	22099702	chr3L	22105872	22105913	3S18	24	6251	11.0	9.0	10.0	2.2	6298	chr3L	22099615	intergenic	not near genes	chr3L	22102764	intergenic	not near genes	chr3L	22105913	intergenic	not near genes	chr3L_24_22100001	chr3L_22100001	RG6N_1-HE
2949	chr3L	22555709	22555729	chr3L	22563250	22563262	blood	4	7537	15.5	6.0	10.8	0.3	7553	chr3L	22555709	intergenic	not near genes	chr3L	22559486	intergenic	not near genes	chr3L	22563262	intergenic	not near genes	chr3L_4_22555001	chr3L_22555001	RG6N_1-HE
2950	chr3L	22555734	22555791	chr3L	22563245	22563262	blood	13	7527	7.0	5.5	6.2	1.8	7528	chr3L	22555734	intergenic	not near genes	chr3L	22559498	intergenic	not near genes	chr3L	22563262	intergenic	not near genes	chr3L_13_22555001	chr3L_22555001	RG6N_1-HE
2951	chr3L	22577567	22577635	chr3L	22582426	22582494	Doc	18	4849	9.5	12.0	10.8	1.5	4927	chr3L	22577567	intergenic	not near genes	chr3L	22580030	intergenic	not near genes	chr3L	22582494	3` UTR	CG14459 -	chr3L_18_22580001	chr3L_22580001	RG6N_1-HE
2952	chr3L	22617133	22617214	chr3L	22624655	22624730	blood	14	7520	4.5	10.5	7.5	1.6	7597	chr3L	22617133	intron	CG14459 -	chr3L	22620932	intron	CG14459 -	chr3L	22624730	intron	CG14459 -	chr3L_14_22620001	chr3L_22620001	RG6N_1-HE
2957	chr3L	22761335	22761398	chr3L	22766833	22766900	Ivk	14	5504	6.5	8.5	7.5	1.6	5565	chr3L	22761335	intron	SPoCk +	chr3L	22764118	intron	SPoCk +	chr3L	22766900	intron	SPoCk +	chr3L_14_22760001	chr3L_22760001	RG6N_1-HE
2958	chr3L	22865925	22865983	chr3L	22867129	22867181	Doc	9	1202	5.0	6.0	5.5	1.4	1256	chr3L	22865925	exon	CG33170 +	chr3L	22866553	intron	CG33170 +	chr3L	22867181	intron	CG33170 +	chr3L_9_22865001	chr3L_22865001	RG6N_1-HE
2964	chr3L	22989813	22989866	chr3L	22996858	22996911	297	10	7044	7.5	0.0	3.8	2.1	7098	chr3L	22989813	intergenic	not near genes	chr3L	22993362	intergenic	not near genes	chr3L	22996911	intergenic	not near genes	chr3L_10_22990001	chr3L_22990001	RG6N_1-HE
2967	chr3L	23042172	23042246	chr3L	23048996	23049070	gypsy6	9	6815	6.5	6.0	6.2	1.2	6898	chr3L	23042172	intergenic	not near genes	chr3L	23045621	intergenic	not near genes	chr3L	23049070	intergenic	not near genes	chr3L_9_23045001	chr3L_23045001	RG6N_1-HE
2970	chr3L	23290432	23290493	chr3L	23295335	23295396	X-element	21	4901	13.0	12.5	12.8	1.5	4964	chr3L	23290432	intergenic	not near genes	chr3L	23292914	intergenic	not near genes	chr3L	23295396	intergenic	not near genes	chr3L_21_23290001	chr3L_23290001	RG6N_1-HE
2973	chr3L	23665463	23665524	chr3L	23665624	23665668	gypsy8	56	156	25.0	23.0	24.0	2.2	205	chr3L	23665463	intron	AGO3 +	chr3L	23665566	intron	AGO3 +	chr3L	23665668	intron	AGO3 +	chr3L_56_23665001	chr3L_23665001	RG6N_1-HE
2978	chr3L	24012360	24012409	chr3L	24020772	24020822	roo	4	8412	2.5	2.0	2.2	1.2	8462	chr3L	24012360	intergenic	not near genes	chr3L	24016591	intergenic	not near genes	chr3L	24020822	intergenic	not near genes	chr3L_4_24015001	chr3L_24015001	RG6N_1-HE
2979	chr3L	24021237	24021294	chr3L	24022441	24022500	1360	7	1221	4.0	2.5	3.2	1.7	1263	chr3L	24021237	intergenic	not near genes	chr3L	24021868	intergenic	not near genes	chr3L	24022500	intergenic	not near genes	chr3L_7_24020001	chr3L_24020001	RG6N_1-HE
2981	chr3L	24168732	24168776	chr3L	24176130	24176160	ZAM	4	7388	24.0	12.5	18.2	0.2	7428	chr3L	24168732	intron	Snap25 +	chr3L	24172446	intron	Snap25 +	chr3L	24176160	intron	Snap25 +	chr3L_4_24170001	chr3L_24170001	RG6N_1-HE
2982	chr3L	24168785	24168808	chr3L	24176123	24176181	ZAM	10	7364	17.0	10.0	13.5	0.7	7396	chr3L	24168785	intron	Snap25 +	chr3L	24172483	intron	Snap25 +	chr3L	24176181	intron	Snap25 +	chr3L_10_24170001	chr3L_24170001	RG6N_1-HE
2986	chr3L	24791832	24791866	chr3L	24796682	24796716	Doc	9	4848	17.0	11.5	14.2	0.6	4884	chr3L	24791832	intergenic	not near genes	chr3L	24794274	intergenic	not near genes	chr3L	24796716	intergenic	not near genes	chr3L_9_24790001	chr3L_24790001	RG6N_1-HE
2989	chr3L	25406575	25406592	chr3L	25411047	25411048	Doc	4	4472	20.5	16.0	18.2	0.2	4473	chr3L	25406575	intergenic	not near genes	chr3L	25408812	intergenic	not near genes	chr3L	25411048	intergenic	not near genes	chr3L_4_25405001	chr3L_25405001	RG6N_1-HE
2990	chr3L	25628456	25628517	chr3L	25633298	25633359	F-element	14	4838	9.0	10.0	9.5	1.3	4903	chr3L	25628456	intron	CG41343 -	chr3L	25630908	intron	CG41343 -	chr3L	25633359	intron	CG41343 -	chr3L_14_25630001	chr3L_25630001	RG6N_1-HE
3001	chr3L	27980634	27980679	chr3L	27985501	27985531	Doc	4	4860	3.5	0.5	2.0	1.3	4897	chr3L	27980634	intron	CG17514 -	chr3L	27983082	intron	CG17514 -	chr3L	27985531	intron	CG17514 -	chr3L_4_27980001	chr3L_27980001	RG6N_1-HE
3007	chr3R	3611021	3611040	chr3R	3617212	3617247	rooA	11	6196	18.0	102.0	60.0	0.2	6226	chr3R	3611021	intergenic	not near genes	chr3R	3614134	intergenic	not near genes	chr3R	3617247	intergenic	not near genes	chr3R_11_3610001	chr3R_3610001	RG6N_1-HE
3009	chr3R	4206014	4206074	chr3R	4211657	4211720	mdg3	7	5645	4.5	0.5	2.5	2.0	5706	chr3R	4206014	intron	CG14636 -	chr3R	4208867	intron	CG14636 -	chr3R	4211720	intron	CG14636 -	chr3R_7_4205001	chr3R_4205001	RG6N_1-HE
3012	chr3R	4366702	4366779	chr3R	4375154	4375233	roo	24	8449	8.5	5.5	7.0	3.0	8531	chr3R	4366702	3` UTR	CG1090 +	chr3R	4370968	intergenic	not near genes	chr3R	4375233	5` UTR	CR44922 +	chr3R_24_4370001	chr3R_4370001	RG6N_1-HE
3013	chr3R	4408369	4408438	chr3R	4412739	4412756	Juan	14	4370	8.0	12.5	10.2	1.2	4387	chr3R	4408369	intron	CG32944 -	chr3R	4410562	intron	CG32944 -	chr3R	4412756	intron	CG32944 -	chr3R_14_4410001	chr3R_4410001	RG6N_1-HE
3016	chr3R	4609504	4609569	chr3R	4610720	4610783	1360	20	1228	9.5	10.0	9.8	1.9	1279	chr3R	4609504	intergenic	not near genes	chr3R	4610144	intergenic	not near genes	chr3R	4610783	intergenic	not near genes	chr3R_20_4610001	chr3R_4610001	RG6N_1-HE
3021	chr3R	4683117	4683203	chr3R	4684947	4684999	S-element	33	1823	14.0	15.0	14.5	2.1	1882	chr3R	4683117	intron	CG43427 +	chr3R	4684058	intron	CG43427 +	chr3R	4684999	intron	CG43427 +	chr3R_33_4680001	chr3R_4680001	RG6N_1-HE
3023	chr3R	4753187	4753254	chr3R	4757561	4757628	F-element	25	4369	10.5	16.0	13.2	1.8	4441	chr3R	4753187	intron,exon	atms +,CG44098 -	chr3R	4755408	intron,intron	atms +,CG44098 -	chr3R	4757628	intron,exon	atms +,CG44098 -	chr3R_25_4755001	chr3R_4755001	RG6N_1-HE
3024	chr3R	4759679	4759706	chr3R	4761239	4761267	hopper2	11	1562	10.5	17.5	14.0	0.7	1588	chr3R	4759679	intron,intron	atms +,CG44098 -	chr3R	4760473	intron,intron	atms +,CG44098 -	chr3R	4761267	intron,intron	atms +,CG44098 -	chr3R_11_4760001	chr3R_4760001	RG6N_1-HE
3025	chr3R	4759709	4759736	chr3R	4761219	4761276	hopper2	11	1556	6.0	14.0	10.0	1.0	1567	chr3R	4759709	intron,intron	atms +,CG44098 -	chr3R	4760492	intron,intron	atms +,CG44098 -	chr3R	4761276	intron,intron	atms +,CG44098 -	chr3R_11_4760001	chr3R_4760001	RG6N_1-HE
3030	chr3R	4887415	4887503	chr3R	4894863	4894935	rover	21	7439	8.5	12.0	10.2	1.9	7520	chr3R	4887415	intergenic	not near genes	chr3R	4891175	intergenic	not near genes	chr3R	4894935	intergenic	not near genes	chr3R_21_4890001	chr3R_4890001	RG6N_1-HE
3037	chr3R	5045785	5045862	chr3R	5052957	5053035	HMS-Beagle	9	7170	2.5	6.0	4.2	1.7	7250	chr3R	5045785	3` UTR	CR43635 -	chr3R	5049410	intergenic	not near genes	chr3R	5053035	intergenic	CR45588 -	chr3R_9_5045001	chr3R_5045001	RG6N_1-HE
3038	chr3R	5067924	5068011	chr3R	5073512	5073589	mdg3	22	5578	4.0	3.5	3.8	4.6	5665	chr3R	5067924	intergenic	not near genes	chr3R	5070756	intergenic	not near genes	chr3R	5073589	intergenic	not near genes	chr3R_22_5070001	chr3R_5070001	RG6N_1-HE
3044	chr3R	5338348	5338354	chr3R	5343588	5343600	Rt1c	6	5244	38.0	12.5	25.2	0.2	5252	chr3R	5338348	intron	mtd -	chr3R	5340974	intron	mtd -	chr3R	5343600	intron	mtd -	chr3R_6_5340001	chr3R_5340001	RG6N_1-HE
3045	chr3R	5338356	5338415	chr3R	5343585	5343652	Rt1c	44	5243	20.5	12.5	16.5	2.5	5296	chr3R	5338356	intron	mtd -	chr3R	5341004	intron	mtd -	chr3R	5343652	intron	mtd -	chr3R_44_5340001	chr3R_5340001	RG6N_1-HE
3047	chr3R	5445904	5445983	chr3R	5452435	5452510	Burdock	19	6525	5.5	4.0	4.8	3.3	6606	chr3R	5445904	intron	CG14669 +	chr3R	5449207	intron	CG14669 +	chr3R	5452510	intron	CG14669 +	chr3R_19_5445001	chr3R_5445001	RG6N_1-HE
3053	chr3R	5745998	5746012	chr3R	5746306	5746323	pogo	4	310	3.0	8.0	5.5	0.6	325	chr3R	5745998	3` UTR	Madm +	chr3R	5746160	3` UTR	Madm +	chr3R	5746323	3` UTR	Madm +	chr3R_4_5745001	chr3R_5745001	RG6N_1-HE
3054	chr3R	5746966	5747017	chr3R	5753219	5753272	diver	8	6259	4.5	1.5	3.0	2.0	6306	chr3R	5746966	intergenic	Madm +	chr3R	5750119	intergenic	not near genes	chr3R	5753272	intergenic	CG2091 -	chr3R_8_5750001	chr3R_5750001	RG6N_1-HE
3056	chr3R	5809055	5809127	chr3R	5809367	5809433	pogo	26	308	10.5	8.0	9.2	2.5	378	chr3R	5809055	3` UTR	CG11000 +	chr3R	5809244	3` UTR	CG11000 +	chr3R	5809433	3` UTR	CG11000 +	chr3R_26_5805001	chr3R_5805001	RG6N_1-HE
3057	chr3R	5822325	5822400	chr3R	5823563	5823638	1360	23	1230	7.5	5.5	6.5	3.1	1313	chr3R	5822325	3` UTR	CG2023 -	chr3R	5822982	3` UTR	CG2023 -	chr3R	5823638	3` UTR	CG2023 -	chr3R_23_5820001	chr3R_5820001	RG6N_1-HE
3063	chr3R	5927542	5927569	chr3R	5927827	5927880	pogo	8	306	7.5	9.0	8.2	0.9	338	chr3R	5927542	intron	CG34113 -	chr3R	5927711	intron	CG34113 -	chr3R	5927880	intron	CG34113 -	chr3R_8_5925001	chr3R_5925001	RG6N_1-HE
3072	chr3R	6015922	6015993	chr3R	6024447	6024512	Tirant	23	8528	5.0	8.0	6.5	3.1	8590	chr3R	6015922	intergenic	not near genes	chr3R	6020217	intergenic	not near genes	chr3R	6024512	intergenic	not near genes	chr3R_23_6020001	chr3R_6020001	RG6N_1-HE
3074	chr3R	6121116	6121166	chr3R	6121372	6121455	BS	10	262	2.0	4.5	3.2	2.4	339	chr3R	6121116	intergenic	not near genes	chr3R	6121286	intergenic	not near genes	chr3R	6121455	intergenic	not near genes	chr3R_10_6120001	chr3R_6120001	RG6N_1-HE
3077	chr3R	6158448	6158484	chr3R	6167102	6167120	Tirant	9	8649	27.5	11.5	19.5	0.4	8672	chr3R	6158448	intergenic	not near genes	chr3R	6162784	intergenic	not near genes	chr3R	6167120	intergenic	CG1077 +	chr3R_9_6160001	chr3R_6160001	RG6N_1-HE
3078	chr3R	6158489	6158525	chr3R	6167091	6167165	Tirant	12	8629	17.5	10.5	14.0	0.8	8676	chr3R	6158489	intergenic	not near genes	chr3R	6162827	intergenic	not near genes	chr3R	6167165	intergenic	CG1077 +	chr3R_12_6160001	chr3R_6160001	RG6N_1-HE
3079	chr3R	6158528	6158535	chr3R	6167090	6167167	Tirant	4	8604	13.0	9.5	11.2	0.3	8639	chr3R	6158528	intergenic	not near genes	chr3R	6162848	intergenic	not near genes	chr3R	6167167	intergenic	CG1077 +	chr3R_4_6160001	chr3R_6160001	RG6N_1-HE
3080	chr3R	6175113	6175196	chr3R	6182450	6182505	HMS-Beagle2	16	7339	4.5	4.0	4.2	3.1	7392	chr3R	6175113	intergenic	Osi1 +	chr3R	6178809	intron	CR45194 +	chr3R	6182505	intergenic	CR45194 +	chr3R_16_6175001	chr3R_6175001	RG6N_1-HE
3082	chr3R	6206230	6206247	chr3R	6206518	6206519	BS	4	281	19.5	8.5	14.0	0.3	289	chr3R	6206230	exon	Osi24 +	chr3R	6206374	intron	Osi24 +	chr3R	6206519	intron	Osi24 +	chr3R_4_6205001	chr3R_6205001	RG6N_1-HE
3083	chr3R	6206251	6206315	chr3R	6206507	6206584	BS	12	274	9.0	8.5	8.8	1.2	333	chr3R	6206251	exon	Osi24 +	chr3R	6206418	intron	Osi24 +	chr3R	6206584	intron	Osi24 +	chr3R_12_6205001	chr3R_6205001	RG6N_1-HE
3088	chr3R	6509977	6510042	chr3R	6515123	6515185	jockey	22	5150	9.5	6.0	7.8	2.5	5208	chr3R	6509977	intergenic	not near genes	chr3R	6512581	intergenic	not near genes	chr3R	6515185	intergenic	not near genes	chr3R_22_6510001	chr3R_6510001	RG6N_1-HE
3097	chr3R	6737436	6737520	chr3R	6739294	6739346	Doc	23	1844	11.0	11.5	11.2	1.9	1910	chr3R	6737436	intron	pb -	chr3R	6738391	intron	pb -	chr3R	6739346	intron	pb -	chr3R_23_6735001	chr3R_6735001	RG6N_1-HE
3118	chr3R	7039824	7039838	chr3R	7040261	7040269	INE-1	5	442	8.0	2.5	5.2	0.8	445	chr3R	7039824	intergenic	CR44933 +	chr3R	7040046	intergenic	CR44933 +	chr3R	7040269	intergenic	not near genes	chr3R_5_7040001	chr3R_7040001	RG6N_1-HE
3140	chr3R	7558545	7558554	chr3R	7563280	7563287	Doc	4	4734	5.5	4.5	5.0	0.7	4742	chr3R	7558545	intergenic	not near genes	chr3R	7560916	intergenic	not near genes	chr3R	7563287	intergenic	not near genes	chr3R_4_7560001	chr3R_7560001	RG6N_1-HE
3143	chr3R	7694521	7694594	chr3R	7713652	7713724	invader3	26	19132	9.0	10.5	9.8	2.4	19203	chr3R	7694521	3` UTR	Nlg1 +	chr3R	7704122	intergenic	not near genes	chr3R	7713724	intergenic	not near genes	chr3R_26_7700001	chr3R_7700001	RG6N_1-HE
3146	chr3R	7729409	7729488	chr3R	7737414	7737496	Stalker2	47	8007	19.0	19.5	19.2	2.3	8087	chr3R	7729409	intergenic	not near genes	chr3R	7733452	intergenic	not near genes	chr3R	7737496	intergenic	not near genes	chr3R_47_7730001	chr3R_7730001	RG6N_1-HE
3152	chr3R	7849579	7849667	chr3R	7850817	7850886	1360	12	1230	2.5	6.0	4.2	2.3	1307	chr3R	7849579	intron	CG34384 +	chr3R	7850232	intron	CG34384 +	chr3R	7850886	intron	CG34384 +	chr3R_12_7850001	chr3R_7850001	RG6N_1-HE
3159	chr3R	7973268	7973339	chr3R	7974403	7974468	1360	15	1134	7.5	8.5	8.0	1.7	1200	chr3R	7973268	intergenic	not near genes	chr3R	7973868	intergenic	not near genes	chr3R	7974468	3` UTR	CD98hc -	chr3R_15_7970001	chr3R_7970001	RG6N_1-HE
3162	chr3R	8090497	8090564	chr3R	8094045	8094057	297	25	3541	5.0	18.5	11.8	2.0	3560	chr3R	8090497	intergenic	CR44330 +	chr3R	8092277	intergenic	not near genes	chr3R	8094057	intergenic	CG7900 +	chr3R_25_8090001	chr3R_8090001	RG6N_1-HE
3163	chr3R	8094348	8094426	chr3R	8099724	8099802	Transpac	19	5376	6.0	3.5	4.8	3.3	5454	chr3R	8094348	intron	CG7900 +	chr3R	8097075	intron	CG7900 +	chr3R	8099802	intron	CG7900 +	chr3R_19_8095001	chr3R_8095001	RG6N_1-HE
3164	chr3R	8101702	8101715	chr3R	8104856	8104870	G2	6	3154	17.0	4.0	10.5	0.5	3168	chr3R	8101702	exon	CG7900 +	chr3R	8103286	intron	CG7900 +	chr3R	8104870	3` UTR	CG7900 +	chr3R_6_8100001	chr3R_8100001	RG6N_1-HE
3165	chr3R	8101722	8101730	chr3R	8104849	8104858	G2	5	3136	15.5	3.0	9.2	0.5	3136	chr3R	8101722	exon	CG7900 +	chr3R	8103290	intron	CG7900 +	chr3R	8104858	3` UTR	CG7900 +	chr3R_5_8100001	chr3R_8100001	RG6N_1-HE
3166	chr3R	8101732	8101743	chr3R	8104886	8104894	G2	4	3154	13.5	8.0	10.8	0.3	3162	chr3R	8101732	exon	CG7900 +	chr3R	8103313	intron	CG7900 +	chr3R	8104894	3` UTR	CG7900 +	chr3R_4_8100001	chr3R_8100001	RG6N_1-HE
3167	chr3R	8101749	8101768	chr3R	8104847	8104923	G2	7	3137	10.5	3.0	6.8	0.9	3174	chr3R	8101749	exon	CG7900 +	chr3R	8103336	intron	CG7900 +	chr3R	8104923	3` UTR	CG7900 +	chr3R_7_8100001	chr3R_8100001	RG6N_1-HE
3170	chr3R	8207488	8207512	chr3R	8208405	8208423	F-element	4	912	14.0	4.5	9.2	0.4	935	chr3R	8207488	intergenic	not near genes	chr3R	8207956	intergenic	not near genes	chr3R	8208423	intergenic	not near genes	chr3R_4_8205001	chr3R_8205001	RG6N_1-HE
3171	chr3R	8207513	8207580	chr3R	8208404	8208490	F-element	15	908	6.5	4.5	5.5	2.3	977	chr3R	8207513	intergenic	not near genes	chr3R	8208002	intergenic	not near genes	chr3R	8208490	intergenic	not near genes	chr3R_15_8205001	chr3R_8205001	RG6N_1-HE
3175	chr3R	8402966	8403004	chr3R	8412174	8412214	roo	40	9221	42.0	15.5	28.8	1.3	9248	chr3R	8402966	intron	CG45263 -	chr3R	8407590	intron	CG45263 -	chr3R	8412214	intron	CG45263 -	chr3R_40_8405001	chr3R_8405001	RG6N_1-HE
3176	chr3R	8403008	8403040	chr3R	8412173	8412214	roo	30	9212	22.0	15.5	18.8	1.5	9206	chr3R	8403008	intron	CG45263 -	chr3R	8407611	intron	CG45263 -	chr3R	8412214	intron	CG45263 -	chr3R_30_8405001	chr3R_8405001	RG6N_1-HE
3190	chr3R	8570451	8570497	chr3R	8575122	8575203	HMS-Beagle	13	4691	9.5	7.0	8.2	1.4	4752	chr3R	8570451	intergenic	not near genes	chr3R	8572827	intergenic	not near genes	chr3R	8575203	intergenic	not near genes	chr3R_13_8570001	chr3R_8570001	RG6N_1-HE
3193	chr3R	8601730	8601778	chr3R	8610934	8610965	roo	17	9209	8.0	7.0	7.5	2.0	9235	chr3R	8601730	intron	5-HT2B +	chr3R	8606348	intron	5-HT2B +	chr3R	8610965	intron	5-HT2B +	chr3R_17_8605001	chr3R_8605001	RG6N_1-HE
3195	chr3R	8707313	8707370	chr3R	8709808	8709878	jockey	20	2509	15.0	14.5	14.8	1.3	2565	chr3R	8707313	intergenic	not near genes	chr3R	8708596	intergenic	not near genes	chr3R	8709878	intergenic	not near genes	chr3R_20_8705001	chr3R_8705001	RG6N_1-HE
3207	chr3R	8894824	8894829	chr3R	8896051	8896055	1360	5	1227	25.0	13.5	19.2	0.2	1231	chr3R	8894824	intron	pyd -	chr3R	8895440	intron	pyd -	chr3R	8896055	intron	pyd -	chr3R_5_8895001	chr3R_8895001	RG6N_1-HE
3208	chr3R	8894831	8894887	chr3R	8896047	8896113	1360	30	1223	12.5	13.0	12.8	2.2	1282	chr3R	8894831	intron	pyd -	chr3R	8895472	intron	pyd -	chr3R	8896113	intron	pyd -	chr3R_30_8895001	chr3R_8895001	RG6N_1-HE
3209	chr3R	8898172	8898213	chr3R	8913813	8913863	297	17	15644	10.0	7.0	8.5	1.8	15691	chr3R	8898172	intron	pyd -	chr3R	8906018	intron	pyd -	chr3R	8913863	intron	pyd -	chr3R_17_8905001	chr3R_8905001	RG6N_1-HE
3230	chr3R	9278680	9278804	chr3R	9284041	9284111	Rt1a	27	5328	0.0	8.5	4.2	5.2	5431	chr3R	9278680	intergenic	not near genes	chr3R	9281396	intergenic	not near genes	chr3R	9284111	intergenic	not near genes	chr3R_27_9280001	chr3R_9280001	RG6N_1-HE
3231	chr3R	9319521	9319598	chr3R	9320021	9320072	jockey	23	500	9.5	11.0	10.2	2.1	551	chr3R	9319521	intron	CG8861 -	chr3R	9319796	intron	CG8861 -	chr3R	9320072	intron	CG8861 -	chr3R_23_9315001	chr3R_9315001	RG6N_1-HE
3236	chr3R	9361805	9361827	chr3R	9362110	9362139	pogo	4	310	13.0	16.0	14.5	0.3	334	chr3R	9361805	3` UTR	CG45050 +	chr3R	9361972	3` UTR	CG45050 +	chr3R	9362139	3` UTR	CG45050 +	chr3R_4_9360001	chr3R_9360001	RG6N_1-HE
3255	chr3R	10196896	10196925	chr3R	10202947	10202982	297	9	6053	19.5	6.0	12.8	0.7	6086	chr3R	10196896	exon	Syn +	chr3R	10199939	intron	Syn +	chr3R	10202982	intron	Syn +	chr3R_9_10195001	chr3R_10195001	RG6N_1-HE
3256	chr3R	10231727	10231802	chr3R	10237375	10237433	mdg3	12	5643	5.5	5.0	5.2	1.9	5706	chr3R	10231727	intron	CG42795 +	chr3R	10234580	intron	CG42795 +	chr3R	10237433	intron	CG42795 +	chr3R_12_10230001	chr3R_10230001	RG6N_1-HE
3257	chr3R	10255335	10255383	chr3R	10260846	10260894	I-element	6	5509	4.5	8.0	6.2	0.8	5559	chr3R	10255335	intergenic	Sirt6 -,CG3999 +	chr3R	10258114	intron	Sirt6 -	chr3R	10260894	exon	Sirt6 -	chr3R_6_10255001	chr3R_10255001	RG6N_1-HE
3268	chr3R	10804136	10804193	chr3R	10811738	10811795	17.6	16	7602	3.0	11.5	7.2	2.0	7659	chr3R	10804136	intergenic	CG14692 -	chr3R	10807966	intergenic	not near genes	chr3R	10811795	3` UTR	CG14693 -	chr3R_16_10805001	chr3R_10805001	RG6N_1-HE
3282	chr3R	10957840	10957869	chr3R	10963258	10963307	Rt1c	15	5433	10.5	5.5	8.0	1.7	5467	chr3R	10957840	intergenic	not near genes	chr3R	10960574	intergenic	not near genes	chr3R	10963307	intergenic	not near genes	chr3R_15_10960001	chr3R_10960001	RG6N_1-HE
3283	chr3R	10957872	10957885	chr3R	10963253	10963293	Rt1c	9	5419	6.0	4.5	5.2	1.5	5421	chr3R	10957872	intergenic	not near genes	chr3R	10960582	intergenic	not near genes	chr3R	10963293	intergenic	not near genes	chr3R_9_10960001	chr3R_10960001	RG6N_1-HE
3296	chr3R	11379178	11379184	chr3R	11388404	11388410	roo	5	9226	16.5	31.5	24.0	0.2	9232	chr3R	11379178	intron	pros +	chr3R	11383794	intron	pros +	chr3R	11388410	intron	pros +	chr3R_5_11380001	chr3R_11380001	RG6N_1-HE
3297	chr3R	11379185	11379225	chr3R	11388403	11388433	roo	20	9221	16.5	31.5	24.0	0.8	9248	chr3R	11379185	intron	pros +	chr3R	11383809	intron	pros +	chr3R	11388433	intron	pros +	chr3R_20_11380001	chr3R_11380001	RG6N_1-HE
3309	chr3R	11841013	11841057	chr3R	11846262	11846319	BS	18	5249	16.0	8.0	12.0	1.4	5306	chr3R	11841013	intron	CG6959 -	chr3R	11843666	intron	CG6959 -	chr3R	11846319	intron	CG6959 -	chr3R_18_11840001	chr3R_11840001	RG6N_1-HE
3310	chr3R	11841059	11841083	chr3R	11846258	11846345	BS	20	5252	13.0	7.5	10.2	1.8	5286	chr3R	11841059	intron	CG6959 -	chr3R	11843702	intron	CG6959 -	chr3R	11846345	intron	CG6959 -	chr3R_20_11840001	chr3R_11840001	RG6N_1-HE
3318	chr3R	12022829	12022905	chr3R	12025077	12025151	pogo	12	2247	2.5	8.0	5.2	1.9	2322	chr3R	12022829	intergenic	not near genes	chr3R	12023990	intergenic	not near genes	chr3R	12025151	intergenic	not near genes	chr3R_12_12020001	chr3R_12020001	RG6N_1-HE
3337	chr3R	12780236	12780270	chr3R	12780419	12780453	BS	11	181	12.5	5.0	8.8	1.1	217	chr3R	12780236	intron	beat-Vc -	chr3R	12780344	intron	beat-Vc -	chr3R	12780453	intron	beat-Vc -	chr3R_11_12780001	chr3R_12780001	RG6N_1-HE
3348	chr3R	12920099	12920151	chr3R	12925373	12925425	copia	13	5267	15.5	17.0	16.2	0.8	5326	chr3R	12920099	intron	beat-Vb +	chr3R	12922762	intron	beat-Vb +	chr3R	12925425	intron	beat-Vb +	chr3R_13_12920001	chr3R_12920001	RG6N_1-HE
3349	chr3R	12920154	12920179	chr3R	12925372	12925441	copia	11	5249	8.5	17.0	12.8	0.8	5287	chr3R	12920154	intron	beat-Vb +	chr3R	12922798	intron	beat-Vb +	chr3R	12925441	intron	beat-Vb +	chr3R_11_12920001	chr3R_12920001	RG6N_1-HE
3351	chr3R	13135766	13135845	chr3R	13138012	13138080	pogo	15	2243	10.5	8.0	9.2	1.5	2314	chr3R	13135766	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13136923	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13138080	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R_15_13135001	chr3R_13135001	RG6N_1-HE
3352	chr3R	13142974	13143051	chr3R	13148619	13148686	mdg3	20	5639	8.5	14.0	11.2	1.6	5712	chr3R	13142974	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13145830	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13148686	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R_20_13145001	chr3R_13145001	RG6N_1-HE
3362	chr3R	13517160	13517251	chr3R	13520049	13520139	jockey	17	2887	4.5	1.0	2.8	4.5	2979	chr3R	13517160	intergenic	not near genes	chr3R	13518650	intergenic	not near genes	chr3R	13520139	intergenic	not near genes	chr3R_17_13515001	chr3R_13515001	RG6N_1-HE
3375	chr3R	13712051	13712099	chr3R	13712479	13712527	S-element	6	426	7.0	4.0	5.5	0.9	476	chr3R	13712051	intergenic	primo-1 -,primo-2 -,CR34044 -	chr3R	13712289	intergenic	CR34044 -,primo-1 -,primo-2 -	chr3R	13712527	3` UTR	CR34044 -	chr3R_6_13710001	chr3R_13710001	RG6N_1-HE
3389	chr3R	14021576	14021657	chr3R	14023472	14023553	S-element	25	1895	17.5	11.5	14.5	1.6	1977	chr3R	14021576	intron	rdx -	chr3R	14022564	intron	rdx -	chr3R	14023553	intron	rdx -	chr3R_25_14020001	chr3R_14020001	RG6N_1-HE
3401	chr3R	14180746	14180832	chr3R	14185582	14185667	F-element	35	4834	14.5	19.0	16.8	2.0	4921	chr3R	14180746	intron	Dop1R1 -	chr3R	14183206	intron	Dop1R1 -	chr3R	14185667	intron	Dop1R1 -	chr3R_35_14180001	chr3R_14180001	RG6N_1-HE
3402	chr3R	14194387	14194443	chr3R	14203592	14203645	roo	17	9203	13.5	0.0	6.8	2.2	9258	chr3R	14194387	intron	Dop1R1 -	chr3R	14199016	intron	Dop1R1 -	chr3R	14203645	intron	Dop1R1 -	chr3R_17_14195001	chr3R_14195001	RG6N_1-HE
3405	chr3R	14246337	14246413	chr3R	14247896	14247980	jockey	20	1554	8.5	9.5	9.0	2.0	1643	chr3R	14246337	intergenic	not near genes	chr3R	14247158	intergenic	not near genes	chr3R	14247980	intergenic	not near genes	chr3R_20_14245001	chr3R_14245001	RG6N_1-HE
3438	chr3R	15041383	15041449	chr3R	15045222	15045268	Doc	23	3837	2.5	8.5	5.5	3.5	3885	chr3R	15041383	intergenic	not near genes	chr3R	15043326	intergenic	not near genes	chr3R	15045268	intergenic	not near genes	chr3R_23_15040001	chr3R_15040001	RG6N_1-HE
3439	chr3R	15059213	15059310	chr3R	15059478	15059557	BS	8	262	0.0	0.0	0.0	8.0	344	chr3R	15059213	intron	dpr9 -	chr3R	15059385	intron	dpr9 -	chr3R	15059557	intron	dpr9 -	chr3R_8_15055001	chr3R_15055001	RG6N_1-HE
3442	chr3R	15079747	15079835	chr3R	15080058	15080133	pogo	21	307	5.5	0.0	2.8	5.5	386	chr3R	15079747	3` UTR	CG6966 -	chr3R	15079940	3` UTR	CG6966 -	chr3R	15080133	3` UTR	CG6966 -	chr3R_21_15075001	chr3R_15075001	RG6N_1-HE
3444	chr3R	15102429	15102523	chr3R	15109758	15109848	412	23	7327	8.0	9.5	8.8	2.3	7419	chr3R	15102429	intron	CG42788 -	chr3R	15106138	intron	CG42788 -	chr3R	15109848	intron	CG42788 -	chr3R_23_15105001	chr3R_15105001	RG6N_1-HE
3447	chr3R	15132010	15132028	chr3R	15135141	15135158	Juan	12	3130	26.0	35.0	30.5	0.4	3148	chr3R	15132010	intergenic	CG42788 -	chr3R	15133584	intergenic	not near genes	chr3R	15135158	3` UTR	CG6912 -	chr3R_12_15130001	chr3R_15130001	RG6N_1-HE
3448	chr3R	15132033	15132075	chr3R	15135118	15135180	Juan	34	3126	18.0	21.5	19.8	1.6	3147	chr3R	15132033	intergenic	CG42788 -	chr3R	15133606	intergenic	not near genes	chr3R	15135180	3` UTR	CG6912 -	chr3R_34_15130001	chr3R_15130001	RG6N_1-HE
3451	chr3R	15162485	15162569	chr3R	15167323	15167400	F-element	34	4835	9.5	12.0	10.8	2.9	4915	chr3R	15162485	intron	Gyc88E +	chr3R	15164942	intron	Gyc88E +	chr3R	15167400	intron	Gyc88E +	chr3R_34_15160001	chr3R_15160001	RG6N_1-HE
3463	chr3R	15601114	15601138	chr3R	15608707	15608731	412	11	7590	26.5	19.5	23.0	0.5	7617	chr3R	15601114	intergenic	not near genes	chr3R	15604922	intergenic	not near genes	chr3R	15608731	intergenic	not near genes	chr3R_11_15600001	chr3R_15600001	RG6N_1-HE
3464	chr3R	15601139	15601193	chr3R	15608702	15608748	412	14	7585	13.0	18.5	15.8	0.8	7609	chr3R	15601139	intergenic	not near genes	chr3R	15604944	intergenic	not near genes	chr3R	15608748	intergenic	not near genes	chr3R_14_15600001	chr3R_15600001	RG6N_1-HE
3465	chr3R	15618684	15618760	chr3R	15626225	15626268	blood	15	7541	12.5	10.5	11.5	1.2	7584	chr3R	15618684	intergenic	not near genes	chr3R	15622476	intergenic	not near genes	chr3R	15626268	intergenic	not near genes	chr3R_15_15620001	chr3R_15620001	RG6N_1-HE
3470	chr3R	15735171	15735237	chr3R	15739962	15740028	F-element	23	4791	8.0	11.0	9.5	2.2	4857	chr3R	15735171	intergenic	not near genes	chr3R	15737600	intergenic	not near genes	chr3R	15740028	intergenic	not near genes	chr3R_23_15735001	chr3R_15735001	RG6N_1-HE
3483	chr3R	16189347	16189443	chr3R	16189818	16189915	invader4	19	471	5.0	9.0	7.0	2.4	568	chr3R	16189347	intron	sra +	chr3R	16189631	intron	sra +	chr3R	16189915	intron	sra +	chr3R_19_16185001	chr3R_16185001	RG6N_1-HE
3512	chr3R	16756263	16756337	chr3R	16762521	16762595	diver	25	6252	6.5	7.0	6.8	3.2	6332	chr3R	16756263	intron	bxd -	chr3R	16759429	intron	bxd -	chr3R	16762595	intron	bxd -	chr3R_25_16755001	chr3R_16755001	RG6N_1-HE
3539	chr3R	17294615	17294679	chr3R	17295114	17295178	BS	26	494	6.0	8.5	7.2	3.2	563	chr3R	17294615	intergenic	not near genes	chr3R	17294896	intergenic	not near genes	chr3R	17295178	intergenic	not near genes	chr3R_26_17290001	chr3R_17290001	RG6N_1-HE
3541	chr3R	17346619	17346684	chr3R	17348253	17348318	F-element	5	1634	2.5	7.5	5.0	0.8	1699	chr3R	17346619	intron	beat-IIa -	chr3R	17347468	intron	beat-IIa -	chr3R	17348318	intron	beat-IIa -	chr3R_5_17345001	chr3R_17345001	RG6N_1-HE
3552	chr3R	17509207	17509241	chr3R	17516811	17516849	412	6	7604	8.0	8.0	8.0	0.7	7642	chr3R	17509207	intergenic	not near genes	chr3R	17513028	intergenic	not near genes	chr3R	17516849	intergenic	not near genes	chr3R_6_17510001	chr3R_17510001	RG6N_1-HE
3553	chr3R	17591234	17591312	chr3R	17591741	17591781	F-element	16	494	10.5	9.5	10.0	1.5	547	chr3R	17591234	intergenic	not near genes	chr3R	17591508	intergenic	not near genes	chr3R	17591781	intergenic	not near genes	chr3R_16_17590001	chr3R_17590001	RG6N_1-HE
3555	chr3R	17638257	17638270	chr3R	17638815	17638829	roo	10	559	8.0	9.0	8.5	1.1	572	chr3R	17638257	intron	CG43175 +	chr3R	17638543	intron	CG43175 +	chr3R	17638829	intron,intron	CG43175 +,CR45222 +	chr3R_10_17635001	chr3R_17635001	RG6N_1-HE
3562	chr3R	17763169	17763172	chr3R	17763726	17763726	roo	5	556	29.0	44.5	36.8	0.1	557	chr3R	17763169	5` UTR	TyrR -	chr3R	17763448	intergenic	TyrR -	chr3R	17763726	intergenic	not near genes	chr3R_5_17760001	chr3R_17760001	RG6N_1-HE
3563	chr3R	17763173	17763180	chr3R	17763724	17763737	roo	5	555	27.0	44.5	35.8	0.1	564	chr3R	17763173	5` UTR	TyrR -	chr3R	17763455	intergenic	TyrR -	chr3R	17763737	intergenic	not near genes	chr3R_5_17760001	chr3R_17760001	RG6N_1-HE
3572	chr3R	17925815	17925822	chr3R	17927336	17927342	hobo	5	1529	22.0	11.0	16.5	0.3	1527	chr3R	17925815	intron	cpo +	chr3R	17926578	intron	cpo +	chr3R	17927342	intron	cpo +	chr3R_5_17925001	chr3R_17925001	RG6N_1-HE
3573	chr3R	17925824	17925848	chr3R	17927331	17927368	hobo	7	1520	17.0	10.5	13.8	0.5	1544	chr3R	17925824	intron	cpo +	chr3R	17926596	intron	cpo +	chr3R	17927368	intron	cpo +	chr3R_7_17925001	chr3R_17925001	RG6N_1-HE
3581	chr3R	18032718	18032807	chr3R	18040457	18040545	opus	20	7737	0.0	1.0	0.5	13.3	7827	chr3R	18032718	intergenic	not near genes	chr3R	18036632	intergenic	not near genes	chr3R	18040545	intergenic	not near genes	chr3R_20_18035001	chr3R_18035001	RG6N_1-HE
3582	chr3R	18061529	18061593	chr3R	18063167	18063232	F-element	14	1639	8.0	8.0	8.0	1.6	1703	chr3R	18061529	intergenic	not near genes	chr3R	18062380	intergenic	not near genes	chr3R	18063232	intergenic	not near genes	chr3R_14_18060001	chr3R_18060001	RG6N_1-HE
3598	chr3R	18331785	18331806	chr3R	18333361	18333381	hopper2	7	1575	8.5	6.0	7.2	0.9	1596	chr3R	18331785	3` UTR	CG15803 -	chr3R	18332583	intron	CG15803 -	chr3R	18333381	3` UTR	CG15803 -	chr3R_7_18330001	chr3R_18330001	RG6N_1-HE
3615	chr3R	18606461	18606534	chr3R	18610751	18610826	F-element	19	4291	2.0	4.0	3.0	4.8	4365	chr3R	18606461	intron,intron	qin +,CG14304 -	chr3R	18608644	intron,intron	qin +,CG14304 -	chr3R	18610826	intron,intron	qin +,CG14304 -	chr3R_19_18605001	chr3R_18605001	RG6N_1-HE
3638	chr3R	18921912	18921955	chr3R	18922308	18922363	1360	10	405	0.0	4.0	2.0	3.3	451	chr3R	18921912	intron	Xrp1 +	chr3R	18922138	intron	Xrp1 +	chr3R	18922363	intron	Xrp1 +	chr3R_10_18920001	chr3R_18920001	RG6N_1-HE
3646	chr3R	19137036	19137094	chr3R	19138896	19138954	Bari1	12	1858	5.0	6.0	5.5	1.8	1918	chr3R	19137036	exon	Cyp12a4 +	chr3R	19137995	intergenic	not near genes	chr3R	19138954	intergenic	Ppcs -	chr3R_12_19135001	chr3R_19135001	RG6N_1-HE
3677	chr3R	19744198	19744212	chr3R	19749487	19749515	Rt1a	7	5301	32.0	15.5	23.8	0.3	5317	chr3R	19744198	intron,intron	GluClalpha +,CR43488 -	chr3R	19746856	intron	GluClalpha +	chr3R	19749515	intron	GluClalpha +	chr3R_7_19745001	chr3R_19745001	RG6N_1-HE
3690	chr3R	20109488	20109550	chr3R	20114756	20114827	copia	13	5272	10.0	7.5	8.8	1.3	5339	chr3R	20109488	intergenic	not near genes	chr3R	20112158	intergenic	not near genes	chr3R	20114827	intergenic	CG10887 +	chr3R_13_20110001	chr3R_20110001	RG6N_1-HE
3691	chr3R	20156632	20156707	chr3R	20165869	20165946	roo	19	9235	7.5	4.0	5.8	2.8	9314	chr3R	20156632	intergenic	not near genes	chr3R	20161289	intergenic	not near genes	chr3R	20165946	intergenic	not near genes	chr3R_19_20160001	chr3R_20160001	RG6N_1-HE
3697	chr3R	20245235	20245293	chr3R	20248916	20248938	F-element	10	3677	2.5	3.0	2.8	2.6	3703	chr3R	20245235	3` UTR	Nlg4 +	chr3R	20247086	intergenic	not near genes	chr3R	20248938	intergenic	not near genes	chr3R_10_20245001	chr3R_20245001	RG6N_1-HE
3700	chr3R	20266470	20266537	chr3R	20272993	20273056	Burdock	30	6536	16.0	13.5	14.8	1.9	6586	chr3R	20266470	intron	cic +	chr3R	20269763	intron	cic +	chr3R	20273056	intron	cic +	chr3R_30_20265001	chr3R_20265001	RG6N_1-HE
3706	chr3R	20330944	20331014	chr3R	20331501	20331571	roo	11	556	4.5	4.0	4.2	2.1	627	chr3R	20330944	intergenic	Sirt2 +	chr3R	20331258	intergenic	Sirt2 +	chr3R	20331571	intergenic	not near genes	chr3R_11_20330001	chr3R_20330001	RG6N_1-HE
3722	chr3R	20506534	20506587	chr3R	20507408	20507461	BS	10	873	10.5	14.0	12.2	0.8	927	chr3R	20506534	intergenic	Or92a +	chr3R	20506998	intergenic	CG4288 -	chr3R	20507461	3` UTR	CG4288 -	chr3R_10_20505001	chr3R_20505001	RG6N_1-HE
3723	chr3R	20512987	20513014	chr3R	20515752	20515786	opus	4	2771	3.0	4.0	3.5	0.9	2799	chr3R	20512987	intergenic	not near genes	chr3R	20514386	intergenic	not near genes	chr3R	20515786	intergenic	not near genes	chr3R_4_20510001	chr3R_20510001	RG6N_1-HE
3734	chr3R	20854426	20854448	chr3R	20859287	20859293	Doc	6	4858	16.0	9.0	12.5	0.4	4867	chr3R	20854426	intron	Ir93a -	chr3R	20856860	intron	Ir93a -	chr3R	20859293	exon	Ir93a -	chr3R_6_20855001	chr3R_20855001	RG6N_1-HE
3735	chr3R	20854451	20854504	chr3R	20859281	20859357	Doc	18	4833	9.0	8.5	8.8	1.8	4906	chr3R	20854451	intron	Ir93a -	chr3R	20856904	intron	Ir93a -	chr3R	20859357	exon	Ir93a -	chr3R_18_20855001	chr3R_20855001	RG6N_1-HE
3741	chr3R	21141618	21141628	chr3R	21150162	21150170	Tirant	5	8547	14.5	3.0	8.8	0.5	8552	chr3R	21141618	intron	SNF4Agamma +	chr3R	21145894	intron	SNF4Agamma +	chr3R	21150170	intron	SNF4Agamma +	chr3R_5_21145001	chr3R_21145001	RG6N_1-HE
3742	chr3R	21141629	21141707	chr3R	21150160	21150208	Tirant	24	8537	5.5	3.0	4.2	4.6	8579	chr3R	21141629	intron	SNF4Agamma +	chr3R	21145918	intron	SNF4Agamma +	chr3R	21150208	intron	SNF4Agamma +	chr3R_24_21145001	chr3R_21145001	RG6N_1-HE
3758	chr3R	21479591	21479620	chr3R	21479741	21479769	INE-1	8	143	15.0	4.5	9.8	0.7	178	chr3R	21479591	intergenic	not near genes	chr3R	21479680	intergenic	not near genes	chr3R	21479769	intergenic	not near genes	chr3R_8_21475001	chr3R_21475001	RG6N_1-HE
3767	chr3R	21608986	21609025	chr3R	21611645	21611692	NOF	14	2672	7.0	5.0	6.0	2.0	2706	chr3R	21608986	intron	InR -	chr3R	21610339	intron	InR -	chr3R	21611692	intron	InR -	chr3R_14_21610001	chr3R_21610001	RG6N_1-HE
3773	chr3R	21761074	21761146	chr3R	21768516	21768573	mdg1	18	7445	5.0	4.5	4.8	3.1	7499	chr3R	21761074	exon	CG42335 +	chr3R	21764824	intron	CG42335 +	chr3R	21768573	exon	CG42335 +	chr3R_18_21760001	chr3R_21760001	RG6N_1-HE
3796	chr3R	22234622	22234712	chr3R	22236010	22236061	pogo	23	1385	0.0	4.5	2.2	7.2	1439	chr3R	22234622	intron	SKIP +	chr3R	22235342	intron	SKIP +	chr3R	22236061	intron	SKIP +	chr3R_23_22235001	chr3R_22235001	RG6N_1-HE
3797	chr3R	22239466	22239518	chr3R	22248585	22248637	roo	16	9117	4.5	0.0	2.2	5.0	9171	chr3R	22239466	intron	SKIP +	chr3R	22244052	intron	SKIP +	chr3R	22248637	intron	SKIP +	chr3R_16_22240001	chr3R_22240001	RG6N_1-HE
3802	chr3R	22450497	22450515	chr3R	22453202	22453212	NOF	9	2706	22.0	16.0	19.0	0.5	2715	chr3R	22450497	intron	CG34376 +	chr3R	22451854	intron	CG34376 +	chr3R	22453212	intron	CG34376 +	chr3R_9_22450001	chr3R_22450001	RG6N_1-HE
3803	chr3R	22450522	22450566	chr3R	22453199	22453270	NOF	24	2699	10.5	16.0	13.2	1.7	2748	chr3R	22450522	intron	CG34376 +	chr3R	22451896	intron	CG34376 +	chr3R	22453270	intron	CG34376 +	chr3R_24_22450001	chr3R_22450001	RG6N_1-HE
3818	chr3R	22881133	22881230	chr3R	22884910	22884991	Doc	7	3773	4.5	5.5	5.0	1.2	3858	chr3R	22881133	intergenic	not near genes	chr3R	22883062	intergenic	not near genes	chr3R	22884991	intergenic	not near genes	chr3R_7_22880001	chr3R_22880001	RG6N_1-HE
3838	chr3R	23558328	23558428	chr3R	23560180	23560281	Bari1	37	1849	5.5	6.0	5.8	5.4	1953	chr3R	23558328	intron	beat-IV +	chr3R	23559304	intron	beat-IV +	chr3R	23560281	intron	beat-IV +	chr3R_37_23555001	chr3R_23555001	RG6N_1-HE
3846	chr3R	23684632	23684659	chr3R	23685186	23685195	roo	9	547	17.5	9.5	13.5	0.6	563	chr3R	23684632	exon	CG18754 +	chr3R	23684914	intron	CG18754 +	chr3R	23685195	exon	CG18754 +	chr3R_9_23680001	chr3R_23680001	RG6N_1-HE
3847	chr3R	23684660	23684721	chr3R	23685180	23685244	roo	15	528	5.5	8.0	6.8	1.9	584	chr3R	23684660	exon	CG18754 +	chr3R	23684952	intron	CG18754 +	chr3R	23685244	exon	CG18754 +	chr3R_15_23680001	chr3R_23680001	RG6N_1-HE
3855	chr3R	23835347	23835430	chr3R	23844568	23844652	roo	22	9219	7.5	9.0	8.2	2.4	9305	chr3R	23835347	intron	CG34355 +	chr3R	23840000	intron	CG34355 +	chr3R	23844652	intron	CG34355 +	chr3R_22_23835001	chr3R_23835001	RG6N_1-HE
3856	chr3R	23851022	23851077	chr3R	23858759	23858815	opus	12	7738	9.0	11.5	10.2	1.1	7793	chr3R	23851022	3` UTR	CG34355 +	chr3R	23854918	intergenic	not near genes	chr3R	23858815	intergenic	not near genes	chr3R_12_23850001	chr3R_23850001	RG6N_1-HE
3867	chr3R	24072088	24072099	chr3R	24072536	24072590	jockey	12	492	6.0	9.0	7.5	1.4	502	chr3R	24072088	intron	4EHP -	chr3R	24072339	intron	4EHP -	chr3R	24072590	intron	4EHP -	chr3R_12_24070001	chr3R_24070001	RG6N_1-HE
3868	chr3R	24076861	24076934	chr3R	24078398	24078471	hobo	20	1528	4.5	11.0	7.8	2.3	1610	chr3R	24076861	intron	4EHP -	chr3R	24077666	intron	4EHP -	chr3R	24078471	intron	4EHP -	chr3R_20_24075001	chr3R_24075001	RG6N_1-HE
3874	chr3R	24207165	24207228	chr3R	24212312	24212367	flea	9	5145	3.0	9.5	6.2	1.2	5202	chr3R	24207165	intron	twin -	chr3R	24209766	intron	twin -	chr3R	24212367	intron	twin -	chr3R_9_24205001	chr3R_24205001	RG6N_1-HE
3882	chr3R	24493236	24493298	chr3R	24493513	24493513	BS	29	292	8.0	10.0	9.0	2.9	277	chr3R	24493236	intergenic	not near genes	chr3R	24493374	intergenic	not near genes	chr3R	24493513	intergenic	not near genes	chr3R_29_24490001	chr3R_24490001	RG6N_1-HE
3891	chr3R	24594611	24594658	chr3R	24594922	24594933	pogo	10	307	11.5	30.0	20.8	0.5	322	chr3R	24594611	intron	mld +	chr3R	24594772	intron	mld +	chr3R	24594933	intron	mld +	chr3R_10_24590001	chr3R_24590001	RG6N_1-HE
3895	chr3R	24730045	24730123	chr3R	24732493	24732580	Doc	7	2460	7.0	0.0	3.5	1.6	2535	chr3R	24730045	intron	tok +	chr3R	24731312	intron	tok +	chr3R	24732580	intron	tok +	chr3R_7_24730001	chr3R_24730001	RG6N_1-HE
3901	chr3R	24927066	24927147	chr3R	24931928	24932009	Doc	15	4858	2.5	4.5	3.5	3.3	4943	chr3R	24927066	3` UTR	Trf4-2 +	chr3R	24929538	intergenic	not near genes	chr3R	24932009	5` UTR	CG11771 +	chr3R_15_24925001	chr3R_24925001	RG6N_1-HE
3912	chr3R	25324324	25324347	chr3R	25328960	25328967	Doc	4	4631	13.5	9.5	11.5	0.3	4643	chr3R	25324324	exon	CHKov1 -	chr3R	25326646	intron	CHKov1 -	chr3R	25328967	exon	CHKov1 -	chr3R_4_25325001	chr3R_25325001	RG6N_1-HE
3913	chr3R	25324350	25324388	chr3R	25328957	25329024	Doc	10	4631	6.0	9.0	7.5	1.2	4674	chr3R	25324350	exon	CHKov1 -	chr3R	25326687	intron	CHKov1 -	chr3R	25329024	intron	CHKov1 -	chr3R_10_25325001	chr3R_25325001	RG6N_1-HE
3928	chr3R	25725786	25725835	chr3R	25735016	25735066	roo	8	9230	1.5	6.0	3.8	1.7	9280	chr3R	25725786	intron	LpR2 -	chr3R	25730426	intron	LpR2 -	chr3R	25735066	intron	LpR2 -	chr3R_8_25730001	chr3R_25730001	RG6N_1-HE
3934	chr3R	25832643	25832687	chr3R	25841885	25841916	roo	9	9240	20.5	11.0	15.8	0.5	9273	chr3R	25832643	exon	alpha4GT2 +	chr3R	25837280	intron	alpha4GT2 +	chr3R	25841916	exon	alpha4GT2 +	chr3R_9_25835001	chr3R_25835001	RG6N_1-HE
3935	chr3R	25832688	25832715	chr3R	25841883	25841947	roo	18	9235	15.0	11.0	13.0	1.3	9259	chr3R	25832688	exon	alpha4GT2 +	chr3R	25837318	intron	alpha4GT2 +	chr3R	25841947	exon	alpha4GT2 +	chr3R_18_25835001	chr3R_25835001	RG6N_1-HE
3962	chr3R	26376272	26376343	chr3R	26385487	26385564	roo	23	9224	7.0	7.5	7.2	2.8	9292	chr3R	26376272	intergenic	not near genes	chr3R	26380918	intergenic	not near genes	chr3R	26385564	intergenic	not near genes	chr3R_23_26380001	chr3R_26380001	RG6N_1-HE
3969	chr3R	26510446	26510522	chr3R	26519578	26519653	roo	22	9131	9.0	13.5	11.2	1.8	9207	chr3R	26510446	intron	plum -	chr3R	26515050	intron	plum -	chr3R	26519653	intron,5` UTR	plum -,CR45226 +	chr3R_22_26515001	chr3R_26515001	RG6N_1-HE
3970	chr3R	26558270	26558285	chr3R	26565653	26565667	Stalker4	6	7382	29.5	9.0	19.2	0.3	7397	chr3R	26558270	intron	scrib +	chr3R	26561968	intron	scrib +	chr3R	26565667	intron	scrib +	chr3R_6_26560001	chr3R_26560001	RG6N_1-HE
3971	chr3R	26558287	26558330	chr3R	26565649	26565694	Stalker4	16	7362	19.0	9.0	14.0	1.1	7407	chr3R	26558287	intron	scrib +	chr3R	26561990	intron	scrib +	chr3R	26565694	intron	scrib +	chr3R_16_26560001	chr3R_26560001	RG6N_1-HE
3972	chr3R	26558332	26558346	chr3R	26565647	26565729	Stalker4	7	7364	13.0	8.5	10.8	0.6	7397	chr3R	26558332	intron	scrib +	chr3R	26562030	intron	scrib +	chr3R	26565729	intron	scrib +	chr3R_7_26560001	chr3R_26560001	RG6N_1-HE
3975	chr3R	26642701	26642747	chr3R	26643160	26643212	jockey	6	462	11.0	3.0	7.0	0.8	511	chr3R	26642701	intergenic	not near genes	chr3R	26642956	intergenic	not near genes	chr3R	26643212	intergenic	not near genes	chr3R_6_26640001	chr3R_26640001	RG6N_1-HE
3984	chr3R	26810493	26810573	chr3R	26811049	26811123	roo	26	554	8.0	12.0	10.0	2.4	630	chr3R	26810493	intron	Tl +	chr3R	26810808	intron	Tl +	chr3R	26811123	intron	Tl +	chr3R_26_26810001	chr3R_26810001	RG6N_1-HE
3994	chr3R	27007350	27007422	chr3R	27016553	27016628	roo	35	9204	18.0	11.0	14.5	2.3	9278	chr3R	27007350	intron	RYa-R +	chr3R	27011989	intron	RYa-R +	chr3R	27016628	intron	RYa-R +	chr3R_35_27010001	chr3R_27010001	RG6N_1-HE
3998	chr3R	27140466	27140539	chr3R	27148136	27148214	412	38	7676	10.5	14.0	12.2	2.9	7748	chr3R	27140466	intron	CG6051 -	chr3R	27144340	intron	CG6051 -	chr3R	27148214	intron	CG6051 -	chr3R_38_27140001	chr3R_27140001	RG6N_1-HE
4010	chr3R	27342733	27342812	chr3R	27351385	27351464	Tirant	25	8649	6.0	10.5	8.2	2.7	8731	chr3R	27342733	intron	CG42534 +	chr3R	27347098	intron	CG42534 +	chr3R	27351464	intron	CG42534 +	chr3R_25_27345001	chr3R_27345001	RG6N_1-HE
4020	chr3R	27521096	27521155	chr3R	27530376	27530430	roo	10	9278	1.0	8.0	4.5	1.8	9334	chr3R	27521096	intron	CG12885 +	chr3R	27525763	intron	CG12885 +	chr3R	27530430	intron	CG12885 +	chr3R_10_27525001	chr3R_27525001	RG6N_1-HE
4025	chr3R	27725478	27725586	chr3R	27731010	27731100	I-element	6	5515	1.5	2.0	1.8	2.1	5622	chr3R	27725478	intergenic	not near genes	chr3R	27728289	intergenic	not near genes	chr3R	27731100	intergenic	not near genes	chr3R_6_27725001	chr3R_27725001	RG6N_1-HE
4028	chr3R	27791585	27791635	chr3R	27794795	27794838	Rt1c	12	3217	9.0	8.5	8.8	1.2	3253	chr3R	27791585	intron	CG34353 -	chr3R	27793212	intron	CG34353 -	chr3R	27794838	intron	CG34353 -	chr3R_12_27790001	chr3R_27790001	RG6N_1-HE
4033	chr3R	27856713	27856724	chr3R	27858256	27858278	hopper2	8	1547	24.5	11.0	17.8	0.4	1565	chr3R	27856713	intron	CG34353 -	chr3R	27857496	intron	CG34353 -	chr3R	27858278	intron	CG34353 -	chr3R_8_27855001	chr3R_27855001	RG6N_1-HE
4034	chr3R	27856735	27856758	chr3R	27858266	27858312	hopper2	12	1545	16.5	11.0	13.8	0.8	1577	chr3R	27856735	intron	CG34353 -	chr3R	27857524	intron	CG34353 -	chr3R	27858312	intron	CG34353 -	chr3R_12_27855001	chr3R_27855001	RG6N_1-HE
4035	chr3R	27856761	27856776	chr3R	27858245	27858330	hopper2	12	1544	11.0	10.5	10.8	1.0	1569	chr3R	27856761	intron	CG34353 -	chr3R	27857546	intron	CG34353 -	chr3R	27858330	intron	CG34353 -	chr3R_12_27855001	chr3R_27855001	RG6N_1-HE
4036	chr3R	27862897	27862979	chr3R	27868259	27868338	Transpac	25	5368	0.0	4.5	2.2	7.8	5441	chr3R	27862897	intron	CG34353 -	chr3R	27865618	intron	CG34353 -	chr3R	27868338	intron	CG34353 -	chr3R_25_27865001	chr3R_27865001	RG6N_1-HE
4037	chr3R	27875647	27875671	chr3R	27882766	27882797	297	11	7123	16.5	6.5	11.5	0.9	7150	chr3R	27875647	intron	CG34353 -	chr3R	27879222	intron	CG34353 -	chr3R	27882797	intron	CG34353 -	chr3R_11_27875001	chr3R_27875001	RG6N_1-HE
4038	chr3R	27875674	27875728	chr3R	27882757	27882800	297	16	7117	9.0	6.0	7.5	1.9	7126	chr3R	27875674	intron	CG34353 -	chr3R	27879237	intron	CG34353 -	chr3R	27882800	intron	CG34353 -	chr3R_16_27875001	chr3R_27875001	RG6N_1-HE
4047	chr3R	28068434	28068454	chr3R	28073943	28073966	I-element	7	5511	8.0	5.5	6.8	0.9	5532	chr3R	28068434	intron	CG34362 +	chr3R	28071200	intron	CG34362 +	chr3R	28073966	intron	CG34362 +	chr3R_7_28070001	chr3R_28070001	RG6N_1-HE
4048	chr3R	28068456	28068507	chr3R	28073938	28074020	I-element	12	5505	6.0	4.5	5.2	1.9	5564	chr3R	28068456	intron	CG34362 +	chr3R	28071238	intron	CG34362 +	chr3R	28074020	intron	CG34362 +	chr3R_12_28070001	chr3R_28070001	RG6N_1-HE
4050	chr3R	28173607	28173691	chr3R	28181108	28181192	mdg1	9	7501	2.0	3.0	2.5	2.6	7585	chr3R	28173607	intron	CG34354 +	chr3R	28177400	intron	CG34354 +	chr3R	28181192	intron	CG34354 +	chr3R_9_28175001	chr3R_28175001	RG6N_1-HE
4053	chr3R	28253287	28253351	chr3R	28255857	28255932	jockey	18	2561	13.0	8.0	10.5	1.6	2645	chr3R	28253287	intergenic	not near genes	chr3R	28254610	intergenic	not near genes	chr3R	28255932	intergenic	not near genes	chr3R_18_28250001	chr3R_28250001	RG6N_1-HE
4057	chr3R	28302050	28302125	chr3R	28302560	28302619	jockey	27	506	6.5	14.0	10.2	2.4	569	chr3R	28302050	intergenic	not near genes	chr3R	28302334	intergenic	not near genes	chr3R	28302619	intergenic	not near genes	chr3R_27_28300001	chr3R_28300001	RG6N_1-HE
4070	chr3R	28758227	28758232	chr3R	28763915	28763920	roo	5	5688	33.0	0.0	16.5	0.3	5693	chr3R	28758227	exon	aqrs -	chr3R	28761074	intergenic	not near genes	chr3R	28763920	intergenic	not near genes	chr3R_5_28760001	chr3R_28760001	RG6N_1-HE
4071	chr3R	28763911	28763922	chr3R	28771421	28771432	Stalker4	7	7510	0.0	12.5	6.2	1.0	7521	chr3R	28763911	intergenic	not near genes	chr3R	28767672	intergenic	not near genes	chr3R	28771432	intergenic	not near genes	chr3R_7_28765001	chr3R_28765001	RG6N_1-HE
4072	chr3R	28792839	28792895	chr3R	28797972	28798045	jockey	16	5147	3.0	5.0	4.0	3.2	5206	chr3R	28792839	intergenic	not near genes	chr3R	28795442	intergenic	not near genes	chr3R	28798045	intergenic	not near genes	chr3R_16_28795001	chr3R_28795001	RG6N_1-HE
4083	chr3R	29079319	29079405	chr3R	29080762	29080821	NOF	26	1439	15.0	11.5	13.2	1.8	1502	chr3R	29079319	intron	CG11873 +	chr3R	29080070	intron	CG11873 +	chr3R	29080821	intron	CG11873 +	chr3R_26_29080001	chr3R_29080001	RG6N_1-HE
4100	chr3R	29319771	29319845	chr3R	29320161	29320224	jockey	8	383	6.5	3.5	5.0	1.3	453	chr3R	29319771	intergenic	Cnx99A -	chr3R	29319998	intergenic	Cnx99A -	chr3R	29320224	intergenic	not near genes	chr3R_8_29320001	chr3R_29320001	RG6N_1-HE
4113	chr3R	29406563	29406635	chr3R	29407911	29407937	jockey	12	1347	10.0	10.0	10.0	1.1	1374	chr3R	29406563	intron	Ptp99A +	chr3R	29407250	intron	Ptp99A +	chr3R	29407937	intron	Ptp99A +	chr3R_12_29405001	chr3R_29405001	RG6N_1-HE
4137	chr3R	29881964	29882024	chr3R	29891186	29891252	roo	12	9222	13.5	8.5	11.0	1.0	9288	chr3R	29881964	intron	CG31038 +	chr3R	29886608	intron	CG31038 +	chr3R	29891252	intron	CG31038 +	chr3R_12_29885001	chr3R_29885001	RG6N_1-HE
4145	chr3R	30084785	30084880	chr3R	30086321	30086367	hobo	14	1529	0.0	12.0	6.0	2.0	1582	chr3R	30084785	intron	sima +	chr3R	30085576	intron	sima +	chr3R	30086367	intron	sima +	chr3R_14_30085001	chr3R_30085001	RG6N_1-HE
4155	chr3R	30317324	30317349	chr3R	30324987	30325004	roo	6	7656	0.0	17.5	8.8	0.6	7680	chr3R	30317324	intron	hdc +	chr3R	30321164	intron	hdc +	chr3R	30325004	intron	hdc +	chr3R_6_30320001	chr3R_30320001	RG6N_1-HE
4157	chr3R	30375484	30375566	chr3R	30383177	30383260	412	6	7694	5.5	3.5	4.5	1.1	7776	chr3R	30375484	intergenic	not near genes	chr3R	30379372	intergenic	not near genes	chr3R	30383260	intergenic	not near genes	chr3R_6_30375001	chr3R_30375001	RG6N_1-HE
4158	chr3R	30396157	30396234	chr3R	30404493	30404571	roo	24	8335	4.5	6.5	5.5	3.7	8414	chr3R	30396157	intergenic	not near genes	chr3R	30400364	intergenic	not near genes	chr3R	30404571	5` UTR	CR45570 +	chr3R_24_30400001	chr3R_30400001	RG6N_1-HE
4165	chr3R	30480437	30480456	chr3R	30482959	30482995	jockey	4	2528	11.5	2.5	7.0	0.5	2558	chr3R	30480437	intron	PH4alphaEFB +	chr3R	30481716	intron	PH4alphaEFB +	chr3R	30482995	intron	PH4alphaEFB +	chr3R_4_30480001	chr3R_30480001	RG6N_1-HE
4166	chr3R	30480458	30480486	chr3R	30482958	30483025	jockey	7	2529	6.5	2.5	4.5	1.3	2567	chr3R	30480458	intron	PH4alphaEFB +	chr3R	30481742	intron	PH4alphaEFB +	chr3R	30483025	intron	PH4alphaEFB +	chr3R_7_30480001	chr3R_30480001	RG6N_1-HE
4175	chr3R	30679455	30679548	chr3R	30686994	30687067	blood	31	7535	5.0	9.0	7.0	3.9	7612	chr3R	30679455	intergenic	not near genes	chr3R	30683261	intergenic	not near genes	chr3R	30687067	intergenic	not near genes	chr3R_31_30680001	chr3R_30680001	RG6N_1-HE
4180	chr3R	30818778	30818831	chr3R	30820382	30820449	1360	22	1627	0.0	10.5	5.2	3.5	1671	chr3R	30818778	intron	cindr +	chr3R	30819614	intron	cindr +	chr3R	30820449	intron	cindr +	chr3R_22_30815001	chr3R_30815001	RG6N_1-HE
4192	chr3R	31074174	31074247	chr3R	31081843	31081916	springer	10	7668	10.0	7.5	8.8	1.0	7742	chr3R	31074174	intron	Sox100B +	chr3R	31078045	intron	Sox100B +	chr3R	31081916	exon	Sox100B +	chr3R_10_31075001	chr3R_31075001	RG6N_1-HE
4201	chr3R	31279320	31279398	chr3R	31285578	31285599	diver	19	6251	6.5	8.0	7.2	2.3	6279	chr3R	31279320	intergenic	not near genes	chr3R	31282460	intergenic	not near genes	chr3R	31285599	intergenic	not near genes	chr3R_19_31280001	chr3R_31280001	RG6N_1-HE
4206	chr3R	31413034	31413107	chr3R	31418290	31418370	copia	11	5258	2.5	0.0	1.2	5.0	5336	chr3R	31413034	intron	Gprk2 +	chr3R	31415702	intron	Gprk2 +	chr3R	31418370	intron	Gprk2 +	chr3R_11_31415001	chr3R_31415001	RG6N_1-HE
4216	chr3R	31691477	31691510	chr3R	31696310	31696347	Doc	9	4831	16.0	12.0	14.0	0.6	4870	chr3R	31691477	intergenic	not near genes	chr3R	31693912	intergenic	not near genes	chr3R	31696347	intergenic	not near genes	chr3R_9_31690001	chr3R_31690001	RG6N_1-HE
4217	chr3R	31691518	31691545	chr3R	31696307	31696361	Doc	14	4813	10.5	12.0	11.2	1.1	4843	chr3R	31691518	intergenic	not near genes	chr3R	31693940	intergenic	not near genes	chr3R	31696361	intergenic	not near genes	chr3R_14_31690001	chr3R_31690001	RG6N_1-HE
4231	chr3R	31997941	31998020	chr3R	32005482	32005510	blood	31	7534	5.0	5.5	5.2	5.0	7569	chr3R	31997941	intron	heph -	chr3R	32001726	intron	heph -	chr3R	32005510	intron	heph -	chr3R_31_32000001	chr3R_32000001	RG6N_1-HE
4237	chr4	76436	76443	chr4	81950	81957	I-element	5	5514	40.0	10.5	25.2	0.2	5521	chr4	76436	intron	pan +	chr4	79196	intron	pan +	chr4	81957	intron	pan +	chr4_5_75001	chr4_75001	RG6N_1-HE
4238	chr4	76444	76497	chr4	81947	82011	I-element	43	5507	18.5	9.5	14.0	2.9	5567	chr4	76444	intron	pan +	chr4	79228	intron	pan +	chr4	82011	intron	pan +	chr4_43_75001	chr4_75001	RG6N_1-HE
4239	chr4	76499	76507	chr4	81946	82015	I-element	4	5495	16.0	9.5	12.8	0.3	5516	chr4	76499	intron	pan +	chr4	79257	intron	pan +	chr4	82015	intron	pan +	chr4_4_75001	chr4_75001	RG6N_1-HE
4243	chr4	292299	292319	chr4	292609	292622	INE-1	5	307	14.0	13.0	13.5	0.3	323	chr4	292299	intron	Syt7 -	chr4	292460	intron	Syt7 -	chr4	292622	intron	Syt7 -	chr4_5_290001	chr4_290001	RG6N_1-HE
4245	chr4	319940	319998	chr4	328187	328243	Stalker2	12	8246	3.5	7.5	5.5	1.8	8303	chr4	319940	3` UTR	CG32850 +	chr4	324092	intron	CG32850 +	chr4	328243	3` UTR,3` UTR	CG32850 +,PMCA -	chr4_12_320001	chr4_320001	RG6N_1-HE
4249	chr4	671552	671574	chr4	680198	680207	Tirant	17	8649	35.5	20.0	27.8	0.6	8655	chr4	671552	intron	CG11360 +	chr4	675880	intron	CG11360 +	chr4	680207	intron	CG11360 +	chr4_17_675001	chr4_675001	RG6N_1-HE
4250	chr4	671578	671624	chr4	680197	680277	Tirant	57	8648	11.5	19.5	15.5	3.5	8699	chr4	671578	intron	CG11360 +	chr4	675928	intron	CG11360 +	chr4	680277	intron	CG11360 +	chr4_57_675001	chr4_675001	RG6N_1-HE
4266	chrX	295817	295826	chrX	303490	303517	412	5	7687	20.0	14.0	17.0	0.3	7700	chrX	295817	intron	CG3777 +	chrX	299667	intron	CG3777 +	chrX	303517	intron	CG3777 +	chrX_5_295001	chrX_295001	RG6N_1-HE
4267	chrX	295835	295878	chrX	303489	303557	412	14	7683	9.0	13.5	11.2	1.1	7722	chrX	295835	intron	CG3777 +	chrX	299696	intron	CG3777 +	chrX	303557	intron	CG3777 +	chrX_14_295001	chrX_295001	RG6N_1-HE
4268	chrX	318417	318486	chrX	323574	323643	flea	33	5154	6.5	13.0	9.8	3.1	5226	chrX	318417	intron,intron	CG3777 +,CG32816 -	chrX	321030	intron,intron	CG3777 +,CG32816 -	chrX	323643	intron,intron	CG3777 +,CG32816 -	chrX_33_320001	chrX_320001	RG6N_1-HE
4270	chrX	428365	428388	chrX	434619	434623	3S18	6	6250	14.0	7.0	10.5	0.5	6258	chrX	428365	intron	CG32816 -	chrX	431494	intron	CG32816 -	chrX	434623	intron	CG32816 -	chrX_6_430001	chrX_430001	RG6N_1-HE
4271	chrX	428389	428431	chrX	434612	434685	3S18	8	6250	9.5	6.5	8.0	0.9	6296	chrX	428389	intron	CG32816 -	chrX	431537	intron	CG32816 -	chrX	434685	intron	CG32816 -	chrX_8_430001	chrX_430001	RG6N_1-HE
4276	chrX	551365	551381	chrX	558997	559014	412	7	7631	26.5	16.0	21.2	0.3	7649	chrX	551365	intron	Appl +	chrX	555190	intron	Appl +	chrX	559014	intron	Appl +	chrX_7_555001	chrX_555001	RG6N_1-HE
4277	chrX	551386	551399	chrX	558993	559026	412	12	7624	22.0	15.5	18.8	0.6	7640	chrX	551386	intron	Appl +	chrX	555206	intron	Appl +	chrX	559026	intron	Appl +	chrX_12_555001	chrX_555001	RG6N_1-HE
4278	chrX	551404	551449	chrX	558991	559066	412	26	7617	8.5	14.5	11.5	2.1	7662	chrX	551404	intron	Appl +	chrX	555235	intron	Appl +	chrX	559066	intron	Appl +	chrX_26_555001	chrX_555001	RG6N_1-HE
4287	chrX	812216	812269	chrX	817916	817961	297	4	5692	6.0	6.0	6.0	0.6	5745	chrX	812216	intron	CG43867 -	chrX	815088	intron	CG43867 -	chrX	817961	intron	CG43867 -	chrX_4_815001	chrX_815001	RG6N_1-HE
4288	chrX	827553	827621	chrX	835401	835483	roo	22	7857	7.0	8.0	7.5	2.6	7930	chrX	827553	intron	CG43867 -	chrX	831518	intron	CG43867 -	chrX	835483	intron	CG43867 -	chrX_22_830001	chrX_830001	RG6N_1-HE
4291	chrX	906640	906724	chrX	908499	908583	S-element	25	1852	6.0	5.0	5.5	3.8	1943	chrX	906640	intron	CG43867 -	chrX	907612	intron	CG43867 -	chrX	908583	intron	CG43867 -	chrX_25_905001	chrX_905001	RG6N_1-HE
4292	chrX	1033291	1033321	chrX	1040995	1041025	412	8	7703	17.0	6.0	11.5	0.6	7734	chrX	1033291	intron	su(w[a]) +	chrX	1037158	intron	su(w[a]) +	chrX	1041025	intron	su(w[a]) +	chrX_8_1035001	chrX_1035001	RG6N_1-HE
4293	chrX	1063710	1063750	chrX	1072572	1072613	roo	9	8863	15.0	14.0	14.5	0.6	8903	chrX	1063710	intron	CR44779 +	chrX	1068162	intron	CR44779 +	chrX	1072613	intron	CR44779 +	chrX_9_1065001	chrX_1065001	RG6N_1-HE
4304	chrX	1357721	1357794	chrX	1367961	1368029	Doc	24	10239	12.5	16.0	14.2	1.6	10308	chrX	1357721	intergenic	png -	chrX	1362875	intergenic	not near genes	chrX	1368029	intergenic	not near genes	chrX_24_1360001	chrX_1360001	RG6N_1-HE
4309	chrX	1517999	1518059	chrX	1523460	1523517	jockey	15	5457	5.0	6.0	5.5	2.3	5518	chrX	1517999	intergenic	inc +	chrX	1520758	intergenic	not near genes	chrX	1523517	intergenic	not near genes	chrX_15_1520001	chrX_1520001	RG6N_1-HE
4318	chrX	1930497	1930546	chrX	1938139	1938188	opus	12	7640	2.0	3.5	2.8	3.2	7691	chrX	1930497	3` UTR	CG11596 +	chrX	1934342	intergenic	not near genes	chrX	1938188	3` UTR	CG3857 -	chrX_12_1930001	chrX_1930001	RG6N_1-HE
4320	chrX	1954832	1954918	chrX	1962824	1962880	Stalker2	9	7970	1.0	2.5	1.8	3.2	8048	chrX	1954832	intron	Hr4 +	chrX	1958856	intron	Hr4 +	chrX	1962880	intron	Hr4 +	chrX_9_1955001	chrX_1955001	RG6N_1-HE
4331	chrX	2308789	2308816	chrX	2317426	2317461	Tirant	10	8649	15.0	15.0	15.0	0.6	8672	chrX	2308789	intron	phl +	chrX	2313125	intron	phl +	chrX	2317461	intron	phl +	chrX_10_2310001	chrX_2310001	RG6N_1-HE
4332	chrX	2399784	2399797	chrX	2408204	2408209	roo	4	8416	23.5	4.0	13.8	0.3	8425	chrX	2399784	intergenic	not near genes	chrX	2403996	intergenic	not near genes	chrX	2408209	intergenic	not near genes	chrX_4_2400001	chrX_2400001	RG6N_1-HE
4333	chrX	2399830	2399867	chrX	2408198	2408262	roo	11	8387	11.5	2.0	6.8	1.4	8432	chrX	2399830	intergenic	not near genes	chrX	2404046	intergenic	not near genes	chrX	2408262	intergenic	not near genes	chrX_11_2400001	chrX_2400001	RG6N_1-HE
4344	chrX	2610337	2610411	chrX	2617511	2617624	HMS-Beagle	4	7203	2.0	0.0	1.0	2.0	7287	chrX	2610337	intergenic	CG8636 -	chrX	2613980	intergenic	not near genes	chrX	2617624	intergenic	Tsp3A -	chrX_4_2610001	chrX_2610001	RG6N_1-HE
4346	chrX	2664330	2664379	chrX	2665545	2665596	1360	25	1215	24.0	15.0	19.5	1.2	1266	chrX	2664330	intron	sgg +	chrX	2664963	intron	sgg +	chrX	2665596	intron	sgg +	chrX_25_2660001	chrX_2660001	RG6N_1-HE
4347	chrX	2664380	2664405	chrX	2665530	2665622	1360	26	1209	13.5	12.0	12.8	1.9	1242	chrX	2664380	intron	sgg +	chrX	2665001	intron	sgg +	chrX	2665622	intron	sgg +	chrX_26_2660001	chrX_2660001	RG6N_1-HE
4351	chrX	2823753	2823767	chrX	2832342	2832373	roo	5	8602	10.5	9.5	10.0	0.5	8620	chrX	2823753	intron	kirre +	chrX	2828063	intron	kirre +	chrX	2832373	intron	kirre +	chrX_5_2825001	chrX_2825001	RG6N_1-HE
4354	chrX	2844840	2844847	chrX	2852322	2852328	mdg1	4	7482	23.5	10.0	16.8	0.2	7488	chrX	2844840	intron	kirre +	chrX	2848584	intron	kirre +	chrX	2852328	intron	kirre +	chrX_4_2845001	chrX_2845001	RG6N_1-HE
4355	chrX	2844851	2844920	chrX	2852320	2852400	mdg1	27	7478	7.5	10.0	8.8	2.8	7549	chrX	2844851	intron	kirre +	chrX	2848626	intron	kirre +	chrX	2852400	intron	kirre +	chrX_27_2845001	chrX_2845001	RG6N_1-HE
4361	chrX	3057965	3058019	chrX	3058276	3058331	pogo	8	309	6.0	1.0	3.5	1.8	366	chrX	3057965	intron	kirre +	chrX	3058148	intron	kirre +	chrX	3058331	intron	kirre +	chrX_8_3055001	chrX_3055001	RG6N_1-HE
4362	chrX	3075572	3075661	chrX	3080948	3081022	Transpac	6	5371	6.5	0.0	3.2	1.4	5450	chrX	3075572	intron	kirre +	chrX	3078297	intron	kirre +	chrX	3081022	intron	kirre +	chrX_6_3075001	chrX_3075001	RG6N_1-HE
4380	chrX	3493043	3493110	chrX	3502257	3502297	roo	13	9222	8.0	4.0	6.0	1.9	9254	chrX	3493043	intron,exon	CR44999 +,Gas8 -	chrX	3497670	intron,intron	CR44999 +,Gas8 -	chrX	3502297	intron,intron	CR44999 +,Gas8 -	chrX_13_3495001	chrX_3495001	RG6N_1-HE
4383	chrX	3597493	3597569	chrX	3619732	3619809	roo	23	22237	16.0	13.0	14.5	1.5	22316	chrX	3597493	intron	AstA-R1 +	chrX	3608651	intron	AstA-R1 +	chrX	3619809	intron	AstA-R1 +	chrX_23_3605001	chrX_3605001	RG6N_1-HE
4390	chrX	3726698	3726797	chrX	3730167	3730233	NOF	6	3451	0.5	0.0	0.2	5.0	3535	chrX	3726698	intron	tlk +	chrX	3728466	intron	tlk +	chrX	3730233	intron	tlk +	chrX_6_3725001	chrX_3725001	RG6N_1-HE
4395	chrX	3842302	3842352	chrX	3842586	3842636	pogo	10	283	5.0	8.0	6.5	1.3	334	chrX	3842302	intron	ec +	chrX	3842469	intron	ec +	chrX	3842636	intron	ec +	chrX_10_3840001	chrX_3840001	RG6N_1-HE
4403	chrX	3986850	3986887	chrX	3994542	3994585	412	14	7700	4.0	10.0	7.0	1.8	7735	chrX	3986850	intergenic	not near genes	chrX	3990718	intergenic	not near genes	chrX	3994585	intergenic	not near genes	chrX_14_3990001	chrX_3990001	RG6N_1-HE
4409	chrX	4157829	4157854	chrX	4164950	4164975	297	7	7119	22.5	7.5	15.0	0.4	7146	chrX	4157829	intron	Fas2 -	chrX	4161402	intron	Fas2 -	chrX	4164975	intron	Fas2 -	chrX_7_4160001	chrX_4160001	RG6N_1-HE
4410	chrX	4157855	4157919	chrX	4164946	4165019	297	30	7109	7.0	7.5	7.2	3.7	7164	chrX	4157855	intron	Fas2 -	chrX	4161437	intron	Fas2 -	chrX	4165019	intron	Fas2 -	chrX_30_4160001	chrX_4160001	RG6N_1-HE
4432	chrX	4700332	4700411	chrX	4700743	4700825	jockey	9	410	4.5	3.0	3.8	1.9	493	chrX	4700332	3` UTR	ctp +	chrX	4700578	3` UTR	ctp +	chrX	4700825	3` UTR	ctp +	chrX_9_4700001	chrX_4700001	RG6N_1-HE
4434	chrX	4763207	4763219	chrX	4763754	4763777	Stalker4	5	552	12.0	5.0	8.5	0.5	570	chrX	4763207	intergenic	not near genes	chrX	4763492	intergenic	not near genes	chrX	4763777	intergenic	not near genes	chrX_5_4760001	chrX_4760001	RG6N_1-HE
4435	chrX	4763229	4763273	chrX	4763743	4763829	Stalker4	7	551	6.0	4.5	5.2	1.1	600	chrX	4763229	intergenic	not near genes	chrX	4763529	intergenic	not near genes	chrX	4763829	intergenic	not near genes	chrX_7_4760001	chrX_4760001	RG6N_1-HE
4438	chrX	4792325	4792396	chrX	4792829	4792879	jockey	24	497	8.5	9.0	8.8	2.4	554	chrX	4792325	intergenic	not near genes	chrX	4792602	intergenic	not near genes	chrX	4792879	intergenic	not near genes	chrX_24_4790001	chrX_4790001	RG6N_1-HE
4439	chrX	4827916	4827951	chrX	4835358	4835391	Stalker4	8	7431	15.5	12.0	13.8	0.5	7475	chrX	4827916	intergenic	not near genes	chrX	4831654	intergenic	not near genes	chrX	4835391	intergenic	not near genes	chrX_8_4830001	chrX_4830001	RG6N_1-HE
4440	chrX	4827956	4827996	chrX	4835355	4835399	Stalker4	14	7408	8.5	11.0	9.8	1.3	7443	chrX	4827956	intergenic	not near genes	chrX	4831678	intergenic	not near genes	chrX	4835399	intergenic	not near genes	chrX_14_4830001	chrX_4830001	RG6N_1-HE
4447	chrX	4989972	4990065	chrX	4997257	4997344	roo	24	7281	1.0	11.5	6.2	3.3	7372	chrX	4989972	intron	CR44833 -	chrX	4993658	intron	CR44833 -	chrX	4997344	intron	CR44833 -	chrX_24_4990001	chrX_4990001	RG6N_1-HE
4450	chrX	5096211	5096287	chrX	5103847	5103923	springer	11	7631	1.0	2.0	1.5	4.4	7712	chrX	5096211	intron,intron	CG15465 +,rg +	chrX	5100067	intron,intron	CG15465 +,rg +	chrX	5103923	intron,intron	CG15465 +,rg +	chrX_11_5100001	chrX_5100001	RG6N_1-HE
4459	chrX	5338648	5338716	chrX	5339970	5340022	jockey	9	1310	10.0	7.5	8.8	0.9	1374	chrX	5338648	intergenic	not near genes	chrX	5339335	intergenic	not near genes	chrX	5340022	intergenic	SK +	chrX_9_5335001	chrX_5335001	RG6N_1-HE
4466	chrX	5480998	5481087	chrX	5485030	5485112	I-element	7	4026	2.5	0.5	1.5	2.8	4114	chrX	5480998	intron	SPR +	chrX	5483055	intron	SPR +	chrX	5485112	intron	SPR +	chrX_7_5480001	chrX_5480001	RG6N_1-HE
4469	chrX	5524773	5524806	chrX	5528703	5528734	412	4	3930	0.5	0.0	0.2	3.3	3961	chrX	5524773	intergenic	snoRNA:Psi28S-3342 -	chrX	5526754	intergenic	not near genes	chrX	5528734	intergenic	Vsx2 -	chrX_4_5525001	chrX_5525001	RG6N_1-HE
4471	chrX	5727354	5727413	chrX	5732164	5732223	Doc	19	4807	4.0	3.0	3.5	4.2	4869	chrX	5727354	intron	CG32758 -	chrX	5729788	intron	CG32758 -	chrX	5732223	intron	CG32758 -	chrX_19_5725001	chrX_5725001	RG6N_1-HE
4479	chrX	5883766	5883772	chrX	5884061	5884084	pogo	4	308	13.0	5.5	9.2	0.4	318	chrX	5883766	intron	CR45668 -	chrX	5883925	intron	CR45668 -	chrX	5884084	intron	CR45668 -	chrX_4_5880001	chrX_5880001	RG6N_1-HE
4480	chrX	5883773	5883820	chrX	5884058	5884132	pogo	9	307	6.5	5.5	6.0	1.3	359	chrX	5883773	intron	CR45668 -	chrX	5883952	intron	CR45668 -	chrX	5884132	intron	CR45668 -	chrX_9_5880001	chrX_5880001	RG6N_1-HE
4481	chrX	5884102	5884190	chrX	5884414	5884455	pogo	18	304	5.0	5.5	5.2	2.9	353	chrX	5884102	intron	CR45668 -	chrX	5884278	intron	CR45668 -	chrX	5884455	intron	CR45668 -	chrX_18_5880001	chrX_5880001	RG6N_1-HE
4484	chrX	6171533	6171604	chrX	6179030	6179094	Quasimodo	17	7497	8.5	8.5	8.5	1.8	7561	chrX	6171533	intron	Ca-alpha1T -	chrX	6175314	intron	Ca-alpha1T -	chrX	6179094	intron	Ca-alpha1T -	chrX_17_6175001	chrX_6175001	RG6N_1-HE
4491	chrX	6335136	6335237	chrX	6337720	6337816	Tirant	17	2578	4.0	2.0	3.0	4.2	2680	chrX	6335136	intergenic	not near genes	chrX	6336476	intergenic	not near genes	chrX	6337816	5` UTR	CG3842 +	chrX_17_6335001	chrX_6335001	RG6N_1-HE
4494	chrX	6392819	6392895	chrX	6397655	6397699	Doc	17	4830	3.0	6.0	4.5	3.1	4880	chrX	6392819	intergenic	not near genes	chrX	6395259	intergenic	not near genes	chrX	6397699	intergenic	not near genes	chrX_17_6395001	chrX_6395001	RG6N_1-HE
4495	chrX	6429955	6429993	chrX	6435478	6435515	Rt1c	24	5535	11.5	18.0	14.8	1.5	5560	chrX	6429955	intron	CG42340 -	chrX	6432735	intron	CG42340 -	chrX	6435515	intron	CG42340 -	chrX_24_6430001	chrX_6430001	RG6N_1-HE
4496	chrX	6445254	6445273	chrX	6451082	6451100	297	5	5828	14.0	13.5	13.8	0.3	5846	chrX	6445254	intron	CG42340 -	chrX	6448177	intron	CG42340 -	chrX	6451100	intron	CG42340 -	chrX_5_6445001	chrX_6445001	RG6N_1-HE
4501	chrX	6562758	6562839	chrX	6571312	6571372	Tirant	33	8540	7.0	10.5	8.8	3.4	8614	chrX	6562758	intron	CG34417 +	chrX	6567065	intron	CG34417 +	chrX	6571372	intron	CG34417 +	chrX_33_6565001	chrX_6565001	RG6N_1-HE
4512	chrX	7023547	7023618	chrX	7031008	7031076	Tabor	9	7455	9.5	8.5	9.0	0.9	7529	chrX	7023547	intron	CG12541 -	chrX	7027312	intron	CG12541 -	chrX	7031076	intron	CG12541 -	chrX_9_7025001	chrX_7025001	RG6N_1-HE
4517	chrX	7125199	7125260	chrX	7134407	7134490	roo	23	9228	6.0	11.0	8.5	2.4	9291	chrX	7125199	intergenic	not near genes	chrX	7129844	intergenic	not near genes	chrX	7134490	intergenic	not near genes	chrX_23_7125001	chrX_7125001	RG6N_1-HE
4533	chrX	7702846	7702893	chrX	7703356	7703403	jockey	37	507	15.0	13.0	14.0	2.5	557	chrX	7702846	intron	CHES-1-like -	chrX	7703124	intron	CHES-1-like -	chrX	7703403	intron	CHES-1-like -	chrX_37_7700001	chrX_7700001	RG6N_1-HE
4534	chrX	7702894	7702918	chrX	7703353	7703424	jockey	14	503	14.5	13.0	13.8	0.9	530	chrX	7702894	intron	CHES-1-like -	chrX	7703159	intron	CHES-1-like -	chrX	7703424	intron	CHES-1-like -	chrX_14_7700001	chrX_7700001	RG6N_1-HE
4537	chrX	7784201	7784247	chrX	7784545	7784609	jockey	11	366	10.0	8.0	9.0	1.1	408	chrX	7784201	intergenic	not near genes	chrX	7784405	intergenic	not near genes	chrX	7784609	intergenic	not near genes	chrX_11_7780001	chrX_7780001	RG6N_1-HE
4539	chrX	7845663	7845682	chrX	7847225	7847243	hopper2	5	1560	25.0	1.0	13.0	0.4	1580	chrX	7845663	intergenic	not near genes	chrX	7846453	intergenic	not near genes	chrX	7847243	intergenic	not near genes	chrX_5_7845001	chrX_7845001	RG6N_1-HE
4540	chrX	7845686	7845751	chrX	7847217	7847310	hopper2	12	1550	8.5	2.0	5.2	1.9	1624	chrX	7845686	intergenic	not near genes	chrX	7846498	intergenic	not near genes	chrX	7847310	intergenic	not near genes	chrX_12_7845001	chrX_7845001	RG6N_1-HE
4547	chrX	8031378	8031445	chrX	8035758	8035823	Juan	25	4378	5.5	19.0	12.2	1.9	4445	chrX	8031378	intergenic	not near genes	chrX	8033600	intergenic	not near genes	chrX	8035823	3` UTR	CG2233 -	chrX_25_8030001	chrX_8030001	RG6N_1-HE
4560	chrX	8364785	8364867	chrX	8365253	8365335	BS	13	462	7.0	6.5	6.8	1.7	550	chrX	8364785	intron	nAChRalpha3 -	chrX	8365060	intron	nAChRalpha3 -	chrX	8365335	intron	nAChRalpha3 -	chrX_13_8365001	chrX_8365001	RG6N_1-HE
4583	chrX	8922281	8922303	chrX	8922786	8922808	jockey	5	502	21.5	11.5	16.5	0.3	527	chrX	8922281	intron	rdgA +	chrX	8922544	intron	rdgA +	chrX	8922808	intron	rdgA +	chrX_5_8920001	chrX_8920001	RG6N_1-HE
4584	chrX	8922307	8922352	chrX	8922766	8922839	jockey	14	486	12.0	9.5	10.8	1.2	532	chrX	8922307	intron	rdgA +	chrX	8922573	intron	rdgA +	chrX	8922839	intron	rdgA +	chrX_14_8920001	chrX_8920001	RG6N_1-HE
4585	chrX	8927538	8927579	chrX	8929865	8929920	NOF	12	2331	8.5	4.5	6.5	1.6	2382	chrX	8927538	intron	rdgA +	chrX	8928729	intron	rdgA +	chrX	8929920	intron	rdgA +	chrX_12_8925001	chrX_8925001	RG6N_1-HE
4587	chrX	8948702	8948777	chrX	8956277	8956342	roo	18	7580	8.0	10.5	9.2	1.8	7640	chrX	8948702	intron	rdgA +	chrX	8952522	intron	rdgA +	chrX	8956342	intron	rdgA +	chrX_18_8950001	chrX_8950001	RG6N_1-HE
4602	chrX	9508075	9508153	chrX	9509662	9509735	jockey	7	1582	5.0	3.0	4.0	1.4	1660	chrX	9508075	intron	CG32700 -	chrX	9508905	intron	CG32700 -	chrX	9509735	intron	CG32700 -	chrX_7_9505001	chrX_9505001	RG6N_1-HE
4603	chrX	9575745	9575776	chrX	9576123	9576171	mdg3	10	388	18.5	6.5	12.5	0.7	426	chrX	9575745	intron,exon	CG32699 -,CG42395 -	chrX	9575958	intron,intron	CG32699 -,CG42395 -	chrX	9576171	intron,5` UTR	CG32699 -,CG42395 -	chrX_10_9575001	chrX_9575001	RG6N_1-HE
4604	chrX	9575778	9575816	chrX	9576122	9576158	mdg3	22	378	9.5	6.5	8.0	2.4	380	chrX	9575778	intron,exon	CG32699 -,CG42395 -	chrX	9575968	intron,intron	CG32699 -,CG42395 -	chrX	9576158	intron,5` UTR	CG32699 -,CG42395 -	chrX_22_9575001	chrX_9575001	RG6N_1-HE
4621	chrX	10138172	10138240	chrX	10145747	10145815	412	20	7574	6.0	3.5	4.8	3.4	7643	chrX	10138172	intron,intron	RhoU +,CR44894 -	chrX	10141994	intron,intron	RhoU +,CR44894 -	chrX	10145815	intron,intron	RhoU +,CR44894 -	chrX_20_10140001	chrX_10140001	RG6N_1-HE
4630	chrX	10267298	10267323	chrX	10276516	10276544	roo	6	9220	0.0	7.0	3.5	1.3	9246	chrX	10267298	3` UTR	alpha-Man-I -	chrX	10271921	intron	alpha-Man-I -	chrX	10276544	3` UTR	alpha-Man-I -	chrX_6_10270001	chrX_10270001	RG6N_1-HE
4641	chrX	10550805	10550881	chrX	10552341	10552376	hobo	26	1528	5.0	8.0	6.5	3.5	1571	chrX	10550805	intron	spri -	chrX	10551590	intron	spri -	chrX	10552376	intron	spri -	chrX_26_10550001	chrX_10550001	RG6N_1-HE
4643	chrX	10685992	10686077	chrX	10691200	10691264	roo	25	5205	7.0	0.0	3.5	5.6	5272	chrX	10685992	intron	X11Lbeta +	chrX	10688628	intron	X11Lbeta +	chrX	10691264	intron	X11Lbeta +	chrX_25_10685001	chrX_10685001	RG6N_1-HE
4651	chrX	11095949	11096013	chrX	11103112	11103186	HMS-Beagle	7	7171	3.0	4.0	3.5	1.6	7237	chrX	11095949	intergenic	not near genes	chrX	11099568	intergenic	not near genes	chrX	11103186	intron	CG42249 +	chrX_7_11095001	chrX_11095001	RG6N_1-HE
4657	chrX	11268549	11268596	chrX	11270075	11270112	hopper2	15	1550	0.5	12.5	6.5	2.0	1563	chrX	11268549	intron	CG44422 -	chrX	11269330	intron	CG44422 -	chrX	11270112	intron	CG44422 -	chrX_15_11265001	chrX_11265001	RG6N_1-HE
4659	chrX	11312064	11312080	chrX	11319416	11319504	Stalker2	5	7407	5.0	3.0	4.0	1.0	7440	chrX	11312064	intergenic	not near genes	chrX	11315784	intergenic	not near genes	chrX	11319504	intergenic	not near genes	chrX_5_11315001	chrX_11315001	RG6N_1-HE
4665	chrX	11534977	11535040	chrX	11541518	11541581	Burdock	5	6541	8.5	3.5	6.0	0.7	6604	chrX	11534977	intron	Drak +	chrX	11538279	intron	Drak +	chrX	11541581	intron	Drak +	chrX_5_11535001	chrX_11535001	RG6N_1-HE
4666	chrX	11571403	11571470	chrX	11571702	11571782	pogo	11	309	4.5	4.0	4.2	2.1	379	chrX	11571403	3` UTR,3` UTR	CG11699 +,Kmn1 -	chrX	11571592	3` UTR	Kmn1 -	chrX	11571782	3` UTR	Kmn1 -	chrX_11_11570001	chrX_11570001	RG6N_1-HE
4667	chrX	11633362	11633440	chrX	11640487	11640565	297	27	7122	0.0	9.5	4.8	4.7	7203	chrX	11633362	intron	Ptp10D +	chrX	11636964	intron	Ptp10D +	chrX	11640565	intron	Ptp10D +	chrX_27_11635001	chrX_11635001	RG6N_1-HE
4669	chrX	11645048	11645108	chrX	11648288	11648348	NOF	15	3238	7.0	2.5	4.8	2.6	3300	chrX	11645048	intron	Ptp10D +	chrX	11646698	intron	Ptp10D +	chrX	11648348	intron	Ptp10D +	chrX_15_11645001	chrX_11645001	RG6N_1-HE
4684	chrX	12168075	12168166	chrX	12173588	12173621	I-element	5	5483	0.0	0.5	0.2	4.2	5546	chrX	12168075	intron	Ten-a +	chrX	12170848	intron	Ten-a +	chrX	12173621	intron	Ten-a +	chrX_5_12170001	chrX_12170001	RG6N_1-HE
4694	chrX	12381794	12381827	chrX	12385778	12385811	flea	5	3982	4.0	8.0	6.0	0.7	4017	chrX	12381794	intergenic	not near genes	chrX	12383802	intergenic	not near genes	chrX	12385811	intergenic	not near genes	chrX_5_12380001	chrX_12380001	RG6N_1-HE
4714	chrX	12930538	12930596	chrX	12937725	12937783	HMS-Beagle	10	7185	1.0	5.5	3.2	2.4	7245	chrX	12930538	intron	fne +	chrX	12934160	intron	fne +	chrX	12937783	intron	fne +	chrX_10_12930001	chrX_12930001	RG6N_1-HE
4738	chrX	13402976	13403017	chrX	13403174	13403184	X-element	9	190	11.0	9.5	10.2	0.8	208	chrX	13402976	intergenic	CG12725 -	chrX	13403080	intergenic	CG12725 -	chrX	13403184	intergenic	CG12725 -	chrX_9_13400001	chrX_13400001	RG6N_1-HE
4739	chrX	13429395	13429481	chrX	13430615	13430701	jockey	12	1218	3.0	5.5	4.2	2.3	1306	chrX	13429395	intergenic	not near genes	chrX	13430048	intergenic	not near genes	chrX	13430701	intergenic	not near genes	chrX_12_13430001	chrX_13430001	RG6N_1-HE
4740	chrX	13463596	13463621	chrX	13469233	13469269	mdg3	6	5644	2.0	1.5	1.8	2.1	5673	chrX	13463596	intron	Neto +	chrX	13466432	intron	Neto +	chrX	13469269	intron	Neto +	chrX_6_13465001	chrX_13465001	RG6N_1-HE
4758	chrX	13937921	13937991	chrX	13941257	13941332	I-element	19	3337	5.5	6.5	6.0	2.7	3411	chrX	13937921	intron	mamo -	chrX	13939626	intron	mamo -	chrX	13941332	intron	mamo -	chrX_19_13935001	chrX_13935001	RG6N_1-HE
4760	chrX	14030692	14030722	chrX	14035343	14035383	copia	8	4657	11.0	4.5	7.8	0.9	4691	chrX	14030692	intergenic	not near genes	chrX	14033038	intergenic	not near genes	chrX	14035383	intergenic	not near genes	chrX_8_14030001	chrX_14030001	RG6N_1-HE
4762	chrX	14104980	14105008	chrX	14114189	14114214	roo	10	9212	4.0	4.5	4.2	1.9	9234	chrX	14104980	intergenic	not near genes	chrX	14109597	intergenic	not near genes	chrX	14114214	5` UTR	CR44657 +	chrX_10_14105001	chrX_14105001	RG6N_1-HE
4763	chrX	14105014	14105034	chrX	14114182	14114224	roo	9	9204	3.5	3.0	3.2	2.1	9210	chrX	14105014	intergenic	not near genes	chrX	14109619	intergenic	not near genes	chrX	14114224	5` UTR	CR44657 +	chrX_9_14105001	chrX_14105001	RG6N_1-HE
4770	chrX	14157533	14157624	chrX	14163261	14163358	297	27	5732	6.5	5.5	6.0	3.9	5825	chrX	14157533	intergenic	not near genes	chrX	14160446	intergenic	not near genes	chrX	14163358	intergenic	not near genes	chrX_27_14160001	chrX_14160001	RG6N_1-HE
4785	chrX	14416248	14416319	chrX	14421087	14421158	F-element	36	4839	11.5	7.5	9.5	3.4	4910	chrX	14416248	intron	dpr8 +	chrX	14418703	intron	dpr8 +	chrX	14421158	intron	dpr8 +	chrX_36_14415001	chrX_14415001	RG6N_1-HE
4798	chrX	14636403	14636479	chrX	14641915	14641988	I-element	21	5502	9.0	13.5	11.2	1.7	5585	chrX	14636403	intron	NetA -	chrX	14639196	intron	NetA -	chrX	14641988	intron	NetA -	chrX_21_14635001	chrX_14635001	RG6N_1-HE
4804	chrX	14777981	14778043	chrX	14782849	14782911	Doc	19	4866	7.5	7.0	7.2	2.3	4930	chrX	14777981	3` UTR	CG5347 +	chrX	14780446	intergenic	not near genes	chrX	14782911	intergenic	Ag5r2 -	chrX_19_14780001	chrX_14780001	RG6N_1-HE
4805	chrX	14818699	14818779	chrX	14823973	14824011	copia	31	5267	7.0	6.0	6.5	4.1	5312	chrX	14818699	intron	rut -	chrX	14821355	intron	rut -	chrX	14824011	intron	rut -	chrX_31_14820001	chrX_14820001	RG6N_1-HE
4808	chrX	14936786	14936875	chrX	14946124	14946203	roo	13	9337	2.0	3.0	2.5	3.7	9417	chrX	14936786	intron	pdgy -	chrX	14941494	intron	pdgy -	chrX	14946203	intron	pdgy -	chrX_13_14940001	chrX_14940001	RG6N_1-HE
4810	chrX	15017926	15017965	chrX	15018105	15018147	INE-1	22	177	8.5	12.0	10.2	2.0	221	chrX	15017926	exon	hiw -	chrX	15018036	intron	hiw -	chrX	15018147	exon	hiw -	chrX_22_15015001	chrX_15015001	RG6N_1-HE
4818	chrX	15273669	15273725	chrX	15274887	15274923	1360	20	1217	8.5	6.5	7.5	2.4	1254	chrX	15273669	intergenic	not near genes	chrX	15274296	intergenic	not near genes	chrX	15274923	intergenic	not near genes	chrX_20_15270001	chrX_15270001	RG6N_1-HE
4821	chrX	15326676	15326702	chrX	15326943	15326965	I-element	4	265	0.0	4.0	2.0	1.3	289	chrX	15326676	3` UTR	Top1 +	chrX	15326820	3` UTR	Top1 +	chrX	15326965	3` UTR	Top1 +	chrX_4_15325001	chrX_15325001	RG6N_1-HE
4822	chrX	15412996	15413003	chrX	15417369	15417376	Juan	4	4372	44.0	0.5	22.2	0.2	4380	chrX	15412996	intron	Cngl -	chrX	15415186	intron	Cngl -	chrX	15417376	intron	Cngl -	chrX_4_15415001	chrX_15415001	RG6N_1-HE
4823	chrX	15413012	15413016	chrX	15417363	15417372	Juan	5	4365	41.0	1.5	21.2	0.2	4360	chrX	15413012	intron	Cngl -	chrX	15415192	intron	Cngl -	chrX	15417372	intron	Cngl -	chrX_5_15415001	chrX_15415001	RG6N_1-HE
4824	chrX	15413017	15413053	chrX	15417361	15417398	Juan	10	4359	23.5	1.5	12.5	0.7	4381	chrX	15413017	intron	Cngl -	chrX	15415208	intron	Cngl -	chrX	15417398	intron	Cngl -	chrX_10_15415001	chrX_15415001	RG6N_1-HE
4825	chrX	15421855	15421942	chrX	15423437	15423480	pogo	35	1577	11.5	3.5	7.5	4.1	1625	chrX	15421855	intron	Cngl -	chrX	15422668	intron	Cngl -	chrX	15423480	intron	Cngl -	chrX_35_15420001	chrX_15420001	RG6N_1-HE
4826	chrX	15435623	15435691	chrX	15436113	15436187	rover	11	498	21.0	16.5	18.8	0.6	564	chrX	15435623	intron	Cngl -	chrX	15435905	intron	Cngl -	chrX	15436187	intron	Cngl -	chrX_11_15435001	chrX_15435001	RG6N_1-HE
4854	chrX	16222725	16222790	chrX	16231145	16231211	roo	11	8420	0.0	5.0	2.5	3.1	8486	chrX	16222725	intergenic	not near genes	chrX	16226968	intergenic	not near genes	chrX	16231211	intergenic	not near genes	chrX_11_16225001	chrX_16225001	RG6N_1-HE
4856	chrX	16340601	16340695	chrX	16349826	16349866	roo	16	9221	2.5	4.5	3.5	3.6	9265	chrX	16340601	3` UTR	Dsp1 +	chrX	16345234	intergenic	not near genes	chrX	16349866	intergenic	sl +	chrX_16_16345001	chrX_16345001	RG6N_1-HE
4859	chrX	16492583	16492663	chrX	16498231	16498291	mdg3	31	5646	13.5	13.5	13.5	2.1	5708	chrX	16492583	intron	para -	chrX	16495437	intron	para -	chrX	16498291	exon	para -	chrX_31_16495001	chrX_16495001	RG6N_1-HE
4891	chrX	17195152	17195221	chrX	17200309	17200378	flea	12	5155	10.0	8.0	9.0	1.2	5226	chrX	17195152	3` UTR	baz +	chrX	17197765	3` UTR	baz +	chrX	17200378	3` UTR	baz +	chrX_12_17195001	chrX_17195001	RG6N_1-HE
4911	chrX	17431292	17431310	chrX	17431703	17431722	jockey	8	406	22.5	10.0	16.2	0.5	430	chrX	17431292	intron	CG12994 -	chrX	17431507	intron	CG12994 -	chrX	17431722	intron	CG12994 -	chrX_8_17430001	chrX_17430001	RG6N_1-HE
4912	chrX	17431312	17431340	chrX	17431701	17431744	jockey	18	402	18.0	9.5	13.8	1.2	432	chrX	17431312	intron	CG12994 -	chrX	17431528	intron	CG12994 -	chrX	17431744	intron	CG12994 -	chrX_18_17430001	chrX_17430001	RG6N_1-HE
4919	chrX	17556904	17556956	chrX	17557448	17557518	mdg1	7	544	2.0	5.5	3.8	1.5	614	chrX	17556904	intron	CG43658 -	chrX	17557211	intron	CG43658 -	chrX	17557518	intron	CG43658 -	chrX_7_17555001	chrX_17555001	RG6N_1-HE
4929	chrX	17792934	17792963	chrX	17796275	17796313	flea	5	3356	8.0	9.5	8.8	0.5	3379	chrX	17792934	intron	OdsH +	chrX	17794624	intron	OdsH +	chrX	17796313	intron	OdsH +	chrX_5_17790001	chrX_17790001	RG6N_1-HE
4953	chrX	18429453	18429507	chrX	18434826	18434889	Transpac	12	5381	6.5	0.0	3.2	2.9	5436	chrX	18429453	intergenic	not near genes	chrX	18432171	intergenic	not near genes	chrX	18434889	intergenic	not near genes	chrX_12_18430001	chrX_18430001	RG6N_1-HE
4962	chrX	18555334	18555389	chrX	18556906	18556988	transib2	10	1598	5.5	0.0	2.8	2.6	1654	chrX	18555334	intron	Bx +	chrX	18556161	intron	Bx +	chrX	18556988	intron	Bx +	chrX_10_18555001	chrX_18555001	RG6N_1-HE
4979	chrX	18957022	18957099	chrX	18965756	18965833	roo	12	8731	4.5	4.0	4.2	2.3	8811	chrX	18957022	intron	CG43759 +	chrX	18961428	intron	CG43759 +	chrX	18965833	intron	CG43759 +	chrX_12_18960001	chrX_18960001	RG6N_1-HE
4985	chrX	19060349	19060424	chrX	19065204	19065279	Doc	18	4854	10.5	9.0	9.8	1.7	4930	chrX	19060349	intron	CG14190 +	chrX	19062814	intron	CG14190 +	chrX	19065279	intron	CG14190 +	chrX_18_19060001	chrX_19060001	RG6N_1-HE
4989	chrX	19136549	19136582	chrX	19143538	19143550	412	4	6978	2.5	9.0	5.8	0.6	7001	chrX	19136549	intergenic	not near genes	chrX	19140050	intergenic	not near genes	chrX	19143550	3` UTR	RhoGAP18B -	chrX_4_19140001	chrX_19140001	RG6N_1-HE
4996	chrX	19356936	19357022	chrX	19358446	19358556	NOF	25	1523	17.5	0.0	8.8	2.6	1620	chrX	19356936	intron	kek5 +	chrX	19357746	intron	kek5 +	chrX	19358556	intron	kek5 +	chrX_25_19355001	chrX_19355001	RG6N_1-HE
4997	chrX	19380105	19380176	chrX	19380417	19380490	pogo	24	311	7.0	0.5	3.8	5.0	385	chrX	19380105	intron	kek5 +	chrX	19380298	intron	kek5 +	chrX	19380490	intron	kek5 +	chrX_24_19380001	chrX_19380001	RG6N_1-HE
5002	chrX	19472068	19472141	chrX	19472709	19472780	jockey	19	631	2.5	6.0	4.2	3.7	712	chrX	19472068	intergenic	kek5 +	chrX	19472424	intergenic	not near genes	chrX	19472780	intergenic	not near genes	chrX_19_19470001	chrX_19470001	RG6N_1-HE
5010	chrX	19710022	19710092	chrX	19711863	19711948	S-element	27	1847	5.5	11.5	8.5	2.8	1926	chrX	19710022	intron	meso18E -	chrX	19710985	intron	meso18E -	chrX	19711948	5` UTR	meso18E -	chrX_27_19710001	chrX_19710001	RG6N_1-HE
5015	chrX	19797290	19797329	chrX	19804673	19804695	Stalker4	12	7380	14.0	7.5	10.8	1.0	7405	chrX	19797290	intergenic	not near genes	chrX	19800992	intergenic	not near genes	chrX	19804695	intergenic	not near genes	chrX_12_19800001	chrX_19800001	RG6N_1-HE
5033	chrX	20144426	20144433	chrX	21085290	21085298	INE-1	5	940865	15.5	42.5	29.0	0.2	940872	chrX	20144426	intergenic	not near genes	chrX	20614862	intron	RunxA -	chrX	21085298	intergenic	not near genes	chrX_5_20610001	chrX_20610001	RG6N_1-HE
5045	chrX	20377263	20377337	chrX	20378799	20378804	hobo	5	1512	3.0	8.0	5.5	0.8	1541	chrX	20377263	intergenic	not near genes	chrX	20378034	intergenic	not near genes	chrX	20378804	intergenic	not near genes	chrX_5_20375001	chrX_20375001	RG6N_1-HE
5055	chrX	20504073	20504154	chrX	20505659	20505725	transib2	30	1584	7.5	8.0	7.8	3.4	1652	chrX	20504073	intron	RhoGAP19D -	chrX	20504899	intron	RhoGAP19D -	chrX	20505725	intron	RhoGAP19D -	chrX_30_20500001	chrX_20500001	RG6N_1-HE
5069	chrX	20836672	20836745	chrX	20844345	20844416	roo	14	7671	5.0	7.5	6.2	1.9	7744	chrX	20836672	intron	shakB -	chrX	20840544	intron	shakB -	chrX	20844416	intron	shakB -	chrX_14_20840001	chrX_20840001	RG6N_1-HE
5073	chrX	20940667	20940724	chrX	20942207	20942233	hobo	26	1535	11.0	10.0	10.5	2.3	1566	chrX	20940667	intergenic	not near genes	chrX	20941450	intergenic	not near genes	chrX	20942233	intergenic	not near genes	chrX_26_20940001	chrX_20940001	RG6N_1-HE
5074	chrX	20956903	20956947	chrX	20962419	20962435	I-element	12	5514	3.0	2.0	2.5	3.4	5532	chrX	20956903	intergenic	not near genes	chrX	20959669	intergenic	not near genes	chrX	20962435	intergenic	Ser6 -	chrX_12_20955001	chrX_20955001	RG6N_1-HE
5086	chrX	21061801	21061883	chrX	21062360	21062430	roo	14	556	9.0	7.0	8.0	1.6	629	chrX	21061801	intron	bves +	chrX	21062116	intron	bves +	chrX	21062430	intron,3` UTR	bves +,CG32512 -	chrX_14_21060001	chrX_21060001	RG6N_1-HE
5089	chrX	21086067	21086151	chrX	21087164	21087250	jockey	13	1096	0.0	5.0	2.5	3.7	1183	chrX	21086067	intergenic	not near genes	chrX	21086658	intergenic	not near genes	chrX	21087250	intergenic	not near genes	chrX_13_21085001	chrX_21085001	RG6N_1-HE
5098	chrX	21254645	21254681	chrX	21255293	21255331	hopper2	15	646	21.0	13.0	17.0	0.8	686	chrX	21254645	intron	CG32521 -	chrX	21254988	intron	CG32521 -	chrX	21255331	intron	CG32521 -	chrX_15_21250001	chrX_21250001	RG6N_1-HE
5099	chrX	21254684	21254713	chrX	21255292	21255370	hopper2	21	642	15.0	13.0	14.0	1.4	686	chrX	21254684	intron	CG32521 -	chrX	21255027	intron	CG32521 -	chrX	21255370	intron	CG32521 -	chrX_21_21255001	chrX_21255001	RG6N_1-HE
5109	chrX	21458632	21458713	chrX	21464139	21464220	Ivk	24	5501	0.0	12.5	6.2	3.3	5588	chrX	21458632	intergenic	not near genes	chrX	21461426	intergenic	not near genes	chrX	21464220	intergenic	not near genes	chrX_24_21460001	chrX_21460001	RG6N_1-HE
5111	chrX	21474355	21474366	chrX	21474792	21474803	1731	6	436	9.0	10.0	9.5	0.6	448	chrX	21474355	intergenic	not near genes	chrX	21474579	intergenic	not near genes	chrX	21474803	intergenic	not near genes	chrX_6_21470001	chrX_21470001	RG6N_1-HE
5112	chrX	21474370	21474420	chrX	21474779	21474857	1731	12	431	7.5	7.5	7.5	1.4	487	chrX	21474370	intergenic	not near genes	chrX	21474614	intergenic	not near genes	chrX	21474857	intergenic	not near genes	chrX_12_21470001	chrX_21470001	RG6N_1-HE
5129	chrX	22620452	22620508	chrX	22626789	22626847	297	4	6339	0.5	2.5	1.5	1.6	6395	chrX	22620452	intron	Cda4 -	chrX	22623650	intron	Cda4 -	chrX	22626847	intron	Cda4 -	chrX_4_22620001	chrX_22620001	RG6N_1-HE
5135	chrX	22681419	22681431	chrX	22688948	22688960	HMS-Beagle2	6	7529	37.0	14.5	25.8	0.2	7541	chrX	22681419	intron	CR44997 +	chrX	22685190	intron	CR44997 +	chrX	22688960	intron	CR44997 +	chrX_6_22685001	chrX_22685001	RG6N_1-HE
5136	chrX	22681434	22681504	chrX	22688942	22689033	HMS-Beagle2	30	7524	13.5	12.5	13.0	2.1	7599	chrX	22681434	intron	CR44997 +	chrX	22685234	intron	CR44997 +	chrX	22689033	intron	CR44997 +	chrX_30_22685001	chrX_22685001	RG6N_1-HE
5137	chrX	22697452	22697507	chrX	22701812	22701866	Juan	25	4366	11.0	19.0	15.0	1.6	4414	chrX	22697452	intron	CR44997 +	chrX	22699659	intron	CR44997 +	chrX	22701866	intron	CR44997 +	chrX_25_22695001	chrX_22695001	RG6N_1-HE
5139	chrX	22771485	22771521	chrX	22774802	22774883	297	7	3342	3.0	6.5	4.8	1.2	3398	chrX	22771485	intron	CR44997 +	chrX	22773184	intron	CR44997 +	chrX	22774883	intron	CR44997 +	chrX_7_22770001	chrX_22770001	RG6N_1-HE
5143	chrX	22811940	22812005	chrX	22816784	22816841	F-element	28	4842	19.5	23.5	21.5	1.2	4901	chrX	22811940	intergenic	CG12446 -	chrX	22814390	intergenic	not near genes	chrX	22816841	intergenic	not near genes	chrX_28_22810001	chrX_22810001	RG6N_1-HE
5152	chrX	22927302	22927354	chrX	22943459	22943511	Cr1a	5	16164	15.5	2.5	9.0	0.5	16209	chrX	22927302	intergenic	not near genes	chrX	22935406	intergenic	not near genes	chrX	22943511	intergenic	not near genes	chrX_5_22935001	chrX_22935001	RG6N_1-HE
5153	chrX	22987070	22987115	chrX	22989783	22989838	Burdock	5	2724	1.0	3.0	2.0	1.7	2768	chrX	22987070	intron,intron	stnA -,stnB -	chrX	22988454	intron,intron	stnA -,stnB -	chrX	22989838	intron,intron	stnA -,stnB -	chrX_5_22985001	chrX_22985001	RG6N_1-HE
5155	chrX	22996271	22996334	chrX	23003557	23003634	roo	11	7296	3.5	7.0	5.2	1.8	7363	chrX	22996271	intron,intron	stnA -,stnB -	chrX	22999952	intron,intron	stnA -,stnB -	chrX	23003634	intron,intron	stnA -,stnB -	chrX_11_22995001	chrX_22995001	RG6N_1-HE
5156	chrX	23036325	23036395	chrX	23037797	23037866	pogo	9	1471	4.5	4.0	4.2	1.7	1541	chrX	23036325	intron	CG12061 +	chrX	23037096	intron	CG12061 +	chrX	23037866	intron	CG12061 +	chrX_9_23035001	chrX_23035001	RG6N_1-HE
5161	chrX	21097548	21097558	chrX	23182764	23182774	jockey2	5	2085216	20.5	7.0	13.8	0.3	2085226	chrX	21097548	intron,intron,intron	CG11566 +,stg1 +,CG15446 -	chrX	22140161	intergenic	not near genes	chrX	23182774	intergenic	not near genes	chrX_5_22140001	chrX_22140001	RG6N_1-HE