SV#	Chr_5p	Chr_coord_5p_start	Chr_coord_5p_end	Chr_3p	Chr_coord_3p_start	Chr_coord_3p_end	repName	Reads_collapsed	avg_del_len	RefGen_3prime	Refgen_5prime	RefGen_Avg	Coverage_Ratio	size	Chr_5p	Chr_coord_5p	classification_5p	comment_5p	Chr_mid	Chr_coord_mid	classification_mid	comment_mid	Chr_3p	Chr_coord_3p	classification_3p	comment_3p	depletion_code	loci_code	libname
1	chr2L	47409	47479	chr2L	52583	52623	jockey	84	5171	40.0	55.5	47.8	1.7	5214	chr2L	47409	intron	Cda5 -	chr2L	50016	intron	Cda5 -	chr2L	52623	intron	Cda5 -	chr2L_84_50001	chr2L_50001	RG4N_1-HE
9	chr2L	347825	347907	chr2L	355396	355478	blood	18	7570	8.5	3.5	6.0	2.6	7653	chr2L	347825	3` UTR	Plc21C +	chr2L	351652	intron	Plc21C +	chr2L	355478	3` UTR	Plc21C +	chr2L_18_350001	chr2L_350001	RG4N_1-HE
21	chr2L	770407	770483	chr2L	772256	772338	Bari1	17	1839	7.5	11.5	9.5	1.6	1931	chr2L	770407	intergenic	not near genes	chr2L	771372	intergenic	not near genes	chr2L	772338	intergenic	CR44614 +	chr2L_17_770001	chr2L_770001	RG4N_1-HE
26	chr2L	976829	976903	chr2L	984530	984609	roo	10	7704	7.0	6.0	6.5	1.3	7780	chr2L	976829	intergenic	not near genes	chr2L	980719	intergenic	not near genes	chr2L	984609	intergenic	not near genes	chr2L_10_980001	chr2L_980001	RG4N_1-HE
27	chr2L	996657	996707	chr2L	1005823	1005873	roo	11	9166	6.0	5.5	5.8	1.6	9216	chr2L	996657	intergenic	not near genes	chr2L	1001265	intergenic	not near genes	chr2L	1005873	intergenic	not near genes	chr2L_11_1000001	chr2L_1000001	RG4N_1-HE
36	chr2L	1220070	1220097	chr2L	1227607	1227634	blood	10	7533	19.0	7.0	13.0	0.7	7564	chr2L	1220070	intron	CG42329 +	chr2L	1223852	intron	CG42329 +	chr2L	1227634	intron	CG42329 +	chr2L_10_1220001	chr2L_1220001	RG4N_1-HE
37	chr2L	1220100	1220147	chr2L	1227606	1227684	blood	19	7534	7.5	7.0	7.2	2.3	7584	chr2L	1220100	intron	CG42329 +	chr2L	1223892	intron	CG42329 +	chr2L	1227684	intron	CG42329 +	chr2L_19_1220001	chr2L_1220001	RG4N_1-HE
41	chr2L	1301695	1301780	chr2L	1302305	1302383	gypsy	38	608	17.0	14.5	15.8	2.3	688	chr2L	1301695	intergenic	not near genes	chr2L	1302039	intergenic	not near genes	chr2L	1302383	intergenic	not near genes	chr2L_38_1300001	chr2L_1300001	RG4N_1-HE
54	chr2L	1570637	1570709	chr2L	1573579	1573652	F-element	33	2942	14.5	17.5	16.0	1.9	3015	chr2L	1570637	intron	haf +	chr2L	1572144	intron	haf +	chr2L	1573652	intron	haf +	chr2L_33_1570001	chr2L_1570001	RG4N_1-HE
61	chr2L	1678913	1678994	chr2L	1686449	1686530	blood	30	7535	11.5	17.5	14.5	1.9	7617	chr2L	1678913	intron	chinmo +	chr2L	1682722	intron	chinmo +	chr2L	1686530	intron	chinmo +	chr2L_30_1680001	chr2L_1680001	RG4N_1-HE
62	chr2L	1711297	1711314	chr2L	1711692	1711709	mdg3	4	395	7.0	5.0	6.0	0.6	412	chr2L	1711297	3` UTR	mRpL48 +	chr2L	1711503	3` UTR	frtz -	chr2L	1711709	3` UTR	frtz -	chr2L_4_1710001	chr2L_1710001	RG4N_1-HE
63	chr2L	1711322	1711379	chr2L	1711690	1711746	mdg3	17	386	2.5	5.0	3.8	3.5	424	chr2L	1711322	3` UTR,3` UTR	mRpL48 +,frtz -	chr2L	1711534	3` UTR	frtz -	chr2L	1711746	3` UTR	frtz -	chr2L_17_1710001	chr2L_1710001	RG4N_1-HE
84	chr2L	2100400	2100404	chr2L	2109551	2109551	roo	4	9151	13.5	11.5	12.5	0.3	9151	chr2L	2100400	intron	dpr3 -	chr2L	2104976	intron	dpr3 -	chr2L	2109551	intron	dpr3 -	chr2L_4_2100001	chr2L_2100001	RG4N_1-HE
85	chr2L	2112071	2112094	chr2L	2119779	2119816	opus	10	7722	7.0	6.5	6.8	1.3	7745	chr2L	2112071	intergenic	not near genes	chr2L	2115944	intergenic	not near genes	chr2L	2119816	intergenic	not near genes	chr2L_10_2115001	chr2L_2115001	RG4N_1-HE
86	chr2L	2112096	2112131	chr2L	2119773	2119853	opus	8	7709	4.5	6.0	5.2	1.3	7757	chr2L	2112096	intergenic	not near genes	chr2L	2115974	intergenic	not near genes	chr2L	2119853	intergenic	not near genes	chr2L_8_2115001	chr2L_2115001	RG4N_1-HE
94	chr2L	2294019	2294031	chr2L	2299254	2299263	copia	4	5244	9.0	2.5	5.8	0.6	5244	chr2L	2294019	intergenic	not near genes	chr2L	2296641	intergenic	not near genes	chr2L	2299263	intergenic	not near genes	chr2L_4_2295001	chr2L_2295001	RG4N_1-HE
95	chr2L	2294033	2294071	chr2L	2299251	2299283	copia	12	5237	3.0	2.5	2.8	3.2	5250	chr2L	2294033	intergenic	not near genes	chr2L	2296658	intergenic	not near genes	chr2L	2299283	intergenic	not near genes	chr2L_12_2295001	chr2L_2295001	RG4N_1-HE
113	chr2L	2661179	2661227	chr2L	2663042	2663099	I-element	12	1874	4.5	8.5	6.5	1.6	1920	chr2L	2661179	intergenic	not near genes	chr2L	2662139	intergenic	not near genes	chr2L	2663099	intergenic	not near genes	chr2L_12_2660001	chr2L_2660001	RG4N_1-HE
132	chr2L	2933222	2933313	chr2L	2935479	2935571	pogo	41	2243	12.0	18.0	15.0	2.6	2349	chr2L	2933222	intron	lilli +	chr2L	2934396	intron	lilli +	chr2L	2935571	intron	lilli +	chr2L_41_2930001	chr2L_2930001	RG4N_1-HE
137	chr2L	3072949	3073023	chr2L	3078243	3078316	copia	6	5288	4.0	3.5	3.8	1.2	5367	chr2L	3072949	intron	toc -	chr2L	3075632	intron	toc -	chr2L	3078316	intron	toc -	chr2L_6_3075001	chr2L_3075001	RG4N_1-HE
144	chr2L	3202689	3202771	chr2L	3210187	3210253	mdg1	25	7495	6.0	0.5	3.2	6.0	7564	chr2L	3202689	intergenic	not near genes	chr2L	3206471	intergenic	not near genes	chr2L	3210253	intergenic	CR45336 +	chr2L_25_3205001	chr2L_3205001	RG4N_1-HE
146	chr2L	3251470	3251512	chr2L	3259104	3259148	springer	21	7635	0.0	29.0	14.5	1.4	7678	chr2L	3251470	intergenic	not near genes	chr2L	3255309	intergenic	not near genes	chr2L	3259148	intergenic	not near genes	chr2L_21_3255001	chr2L_3255001	RG4N_1-HE
147	chr2L	3270147	3270168	chr2L	3270292	3270319	hobo	9	149	18.0	12.5	15.2	0.6	172	chr2L	3270147	exon	CG3347 +	chr2L	3270233	exon	CG3347 +	chr2L	3270319	exon	CG3347 +	chr2L_9_3270001	chr2L_3270001	RG4N_1-HE
154	chr2L	3388543	3388618	chr2L	3388849	3388929	pogo	18	311	10.0	4.5	7.2	2.2	386	chr2L	3388543	intergenic	CG42460 -	chr2L	3388736	intergenic	CG42460 -	chr2L	3388929	intergenic	CR44791 +,CG42460 -	chr2L_18_3385001	chr2L_3385001	RG4N_1-HE
170	chr2L	3649724	3649809	chr2L	3654997	3655082	copia	31	5271	11.5	8.0	9.8	2.9	5358	chr2L	3649724	intron	for -	chr2L	3652403	intron	for -	chr2L	3655082	intron	for -	chr2L_31_3650001	chr2L_3650001	RG4N_1-HE
195	chr2L	4065990	4066029	chr2L	4068880	4068924	Juan	11	2892	20.5	14.5	17.5	0.6	2934	chr2L	4065990	intron	ed +	chr2L	4067457	intron	ed +	chr2L	4068924	intron	ed +	chr2L_11_4065001	chr2L_4065001	RG4N_1-HE
196	chr2L	4066032	4066059	chr2L	4068876	4068891	Juan	18	2880	12.5	14.0	13.2	1.3	2859	chr2L	4066032	intron	ed +	chr2L	4067462	intron	ed +	chr2L	4068891	intron	ed +	chr2L_18_4065001	chr2L_4065001	RG4N_1-HE
203	chr2L	4181218	4181304	chr2L	4183921	4183993	Burdock	6	2690	4.5	0.0	2.2	1.9	2775	chr2L	4181218	intergenic	not near genes	chr2L	4182606	intergenic	not near genes	chr2L	4183993	intergenic	not near genes	chr2L_6_4180001	chr2L_4180001	RG4N_1-HE
217	chr2L	4601643	4601685	chr2L	4609155	4609197	mdg1	18	7509	15.0	9.0	12.0	1.4	7554	chr2L	4601643	intron	dp -	chr2L	4605420	intron	dp -	chr2L	4609197	intron	dp -	chr2L_18_4605001	chr2L_4605001	RG4N_1-HE
218	chr2L	4601686	4601728	chr2L	4609145	4609213	mdg1	10	7503	8.5	8.5	8.5	1.1	7527	chr2L	4601686	intron	dp -	chr2L	4605450	intron	dp -	chr2L	4609213	intron	dp -	chr2L_10_4605001	chr2L_4605001	RG4N_1-HE
220	chr2L	4661772	4661842	chr2L	4669423	4669492	opus	12	7647	4.5	7.5	6.0	1.7	7720	chr2L	4661772	intergenic	not near genes	chr2L	4665632	intergenic	not near genes	chr2L	4669492	intergenic	not near genes	chr2L_12_4665001	chr2L_4665001	RG4N_1-HE
233	chr2L	4918140	4918203	chr2L	4923322	4923384	jockey	10	5181	0.0	1.0	0.5	6.7	5244	chr2L	4918140	intron	hoe1 -	chr2L	4920762	intron	hoe1 -	chr2L	4923384	intron	hoe1 -	chr2L_10_4920001	chr2L_4920001	RG4N_1-HE
245	chr2L	5342742	5342796	chr2L	5345154	5345210	Doc	19	2414	0.0	0.0	0.0	19.0	2468	chr2L	5342742	intergenic	not near genes	chr2L	5343976	intergenic	not near genes	chr2L	5345210	intergenic	not near genes	chr2L_19_5340001	chr2L_5340001	RG4N_1-HE
271	chr2L	5827679	5827697	chr2L	5836730	5836776	roo	7	9070	13.5	3.0	8.2	0.8	9097	chr2L	5827679	intron	TrissinR +	chr2L	5832228	intron	TrissinR +	chr2L	5836776	intron	TrissinR +	chr2L_7_5830001	chr2L_5830001	RG4N_1-HE
272	chr2L	5827698	5827731	chr2L	5836725	5836810	roo	11	9068	8.5	2.5	5.5	1.7	9112	chr2L	5827698	intron	TrissinR +	chr2L	5832254	intron	TrissinR +	chr2L	5836810	intron	TrissinR +	chr2L_11_5830001	chr2L_5830001	RG4N_1-HE
298	chr2L	6363089	6363160	chr2L	6366082	6366147	Burdock	15	2992	8.5	3.5	6.0	2.1	3058	chr2L	6363089	intergenic	not near genes	chr2L	6364618	intergenic	not near genes	chr2L	6366147	intergenic	not near genes	chr2L_15_6360001	chr2L_6360001	RG4N_1-HE
300	chr2L	6426797	6426876	chr2L	6445128	6445206	roo	17	18327	7.0	3.0	5.0	2.8	18409	chr2L	6426797	3` UTR	CG9527 -	chr2L	6436002	intron	CG9527 -	chr2L	6445206	exon	CG9527 -	chr2L_17_6435001	chr2L_6435001	RG4N_1-HE
324	chr2L	6876742	6876799	chr2L	6882974	6883030	diver	20	6239	14.5	9.0	11.8	1.6	6288	chr2L	6876742	intron	Nlg2 +	chr2L	6879886	intron	Nlg2 +	chr2L	6883030	intron	Nlg2 +	chr2L_20_6875001	chr2L_6875001	RG4N_1-HE
326	chr2L	6991354	6991433	chr2L	6998550	6998627	HMS-Beagle	7	7198	2.0	2.5	2.2	2.2	7273	chr2L	6991354	intron	uif -	chr2L	6994990	intron	uif -	chr2L	6998627	intron	uif -	chr2L_7_6990001	chr2L_6990001	RG4N_1-HE
343	chr2L	7343268	7343345	chr2L	7350454	7350531	roo	19	7178	10.5	8.0	9.2	1.9	7263	chr2L	7343268	intron	Wnt6 +	chr2L	7346900	intron	Wnt6 +	chr2L	7350531	intron	Wnt6 +	chr2L_19_7345001	chr2L_7345001	RG4N_1-HE
355	chr2L	7548053	7548099	chr2L	7550564	7550599	Burdock	11	2506	9.0	17.0	13.0	0.8	2546	chr2L	7548053	intron	RapGAP1 -	chr2L	7549326	intron	RapGAP1 -	chr2L	7550599	intron	RapGAP1 -	chr2L_11_7545001	chr2L_7545001	RG4N_1-HE
356	chr2L	7579156	7579231	chr2L	7579418	7579481	BS	8	260	1.0	0.5	0.8	4.4	325	chr2L	7579156	intergenic	RapGAP1 -	chr2L	7579318	intergenic	RapGAP1 -	chr2L	7579481	intergenic	not near genes	chr2L_8_7575001	chr2L_7575001	RG4N_1-HE
378	chr2L	7959025	7959064	chr2L	7960504	7960546	pogo	10	1480	5.5	8.5	7.0	1.2	1521	chr2L	7959025	intron	Snoo -	chr2L	7959786	intron	Snoo -	chr2L	7960546	intron	Snoo -	chr2L_10_7955001	chr2L_7955001	RG4N_1-HE
379	chr2L	7977071	7977093	chr2L	7984095	7984107	297	6	7034	4.5	1.5	3.0	1.5	7036	chr2L	7977071	intron	Snoo -	chr2L	7980589	intron	Snoo -	chr2L	7984107	intron,5` UTR	Snoo -,CG7231 +	chr2L_6_7980001	chr2L_7980001	RG4N_1-HE
382	chr2L	8013600	8013638	chr2L	8023606	8023645	copia	10	10006	5.0	6.5	5.8	1.5	10045	chr2L	8013600	intron	Tg +	chr2L	8018622	intron	Tg +	chr2L	8023645	intron	Tg +	chr2L_10_8015001	chr2L_8015001	RG4N_1-HE
401	chr2L	8452360	8452438	chr2L	8461601	8461677	roo	26	9239	7.0	10.0	8.5	2.7	9317	chr2L	8452360	intron	fu12 -	chr2L	8457018	intron	fu12 -	chr2L	8461677	intron	fu12 -	chr2L_26_8455001	chr2L_8455001	RG4N_1-HE
414	chr2L	8723056	8723137	chr2L	8731504	8731549	Tirant	32	8441	12.5	5.0	8.8	3.3	8493	chr2L	8723056	intron	raw -	chr2L	8727302	intron	raw -	chr2L	8731549	intron	raw -	chr2L_32_8725001	chr2L_8725001	RG4N_1-HE
425	chr2L	9000260	9000313	chr2L	9007841	9007894	roo	17	7578	7.0	7.0	7.0	2.1	7634	chr2L	9000260	intergenic	Try29F +	chr2L	9004077	intergenic	not near genes	chr2L	9007894	intergenic	not near genes	chr2L_17_9000001	chr2L_9000001	RG4N_1-HE
431	chr2L	9217912	9217945	chr2L	9222770	9222803	Doc	10	4858	15.5	13.5	14.5	0.6	4891	chr2L	9217912	intron	tai +	chr2L	9220358	intron	tai +	chr2L	9222803	intron	tai +	chr2L_10_9220001	chr2L_9220001	RG4N_1-HE
432	chr2L	9217947	9217989	chr2L	9222763	9222845	Doc	20	4854	7.5	12.0	9.8	1.9	4898	chr2L	9217947	intron	tai +	chr2L	9220396	intron	tai +	chr2L	9222845	intron	tai +	chr2L_20_9220001	chr2L_9220001	RG4N_1-HE
445	chr2L	9393440	9393522	chr2L	9396477	9396557	jockey	29	3034	5.0	12.0	8.5	3.1	3117	chr2L	9393440	intron	Shawl -	chr2L	9394998	intron	Shawl -	chr2L	9396557	intron	Shawl -	chr2L_29_9390001	chr2L_9390001	RG4N_1-HE
457	chr2L	9770706	9770780	chr2L	9770874	9770948	1360	37	166	12.5	12.0	12.2	2.8	242	chr2L	9770706	intron	ppk18 -	chr2L	9770827	intron	ppk18 -	chr2L	9770948	exon	ppk18 -	chr2L_37_9770001	chr2L_9770001	RG4N_1-HE
461	chr2L	9973671	9973703	chr2L	9980853	9980893	HMS-Beagle	15	7183	10.5	19.5	15.0	0.9	7222	chr2L	9973671	intergenic	not near genes	chr2L	9977282	intergenic	not near genes	chr2L	9980893	intergenic	not near genes	chr2L_15_9975001	chr2L_9975001	RG4N_1-HE
462	chr2L	9973705	9973755	chr2L	9980849	9980906	HMS-Beagle	19	7181	9.5	17.0	13.2	1.3	7201	chr2L	9973705	intergenic	not near genes	chr2L	9977306	intergenic	not near genes	chr2L	9980906	intergenic	not near genes	chr2L_19_9975001	chr2L_9975001	RG4N_1-HE
475	chr2L	10138127	10138144	chr2L	10143443	10143461	Rt1c	6	5316	6.5	6.5	6.5	0.8	5334	chr2L	10138127	intron	CG44153 -	chr2L	10140794	intron	CG44153 -	chr2L	10143461	intron	CG44153 -	chr2L_6_10140001	chr2L_10140001	RG4N_1-HE
476	chr2L	10138145	10138187	chr2L	10143436	10143489	Rt1c	12	5310	3.0	6.0	4.5	2.2	5344	chr2L	10138145	intron	CG44153 -	chr2L	10140817	intron	CG44153 -	chr2L	10143489	intron	CG44153 -	chr2L_12_10140001	chr2L_10140001	RG4N_1-HE
478	chr2L	10156266	10156279	chr2L	10163807	10163813	blood	5	7540	23.0	8.0	15.5	0.3	7547	chr2L	10156266	intron,3` UTR	CG44153 -,CG4839 +	chr2L	10160040	intron	CG44153 -	chr2L	10163813	intron	CG44153 -	chr2L_5_10160001	chr2L_10160001	RG4N_1-HE
479	chr2L	10156288	10156345	chr2L	10163798	10163872	blood	25	7526	11.0	7.5	9.2	2.5	7584	chr2L	10156288	intron,3` UTR	CG44153 -,CG4839 +	chr2L	10160080	intron	CG44153 -	chr2L	10163872	intron	CG44153 -	chr2L_25_10160001	chr2L_10160001	RG4N_1-HE
497	chr2L	10592781	10592788	chr2L	10600513	10600521	opus	4	7733	19.0	14.5	16.8	0.2	7740	chr2L	10592781	intron	Trim9 +	chr2L	10596651	intron	Trim9 +	chr2L	10600521	intron	Trim9 +	chr2L_4_10595001	chr2L_10595001	RG4N_1-HE
498	chr2L	10592790	10592865	chr2L	10600511	10600587	opus	43	7729	7.0	13.5	10.2	3.8	7797	chr2L	10592790	intron	Trim9 +	chr2L	10596688	intron	Trim9 +	chr2L	10600587	intron	Trim9 +	chr2L_43_10595001	chr2L_10595001	RG4N_1-HE
516	chr2L	10862788	10862845	chr2L	10864472	10864479	Rt1c	4	1659	7.0	5.5	6.2	0.6	1691	chr2L	10862788	intron	CR43807 -	chr2L	10863634	intron	CR43807 -	chr2L	10864479	3` UTR	CR43807 -	chr2L_4_10860001	chr2L_10860001	RG4N_1-HE
517	chr2L	10862849	10862865	chr2L	10864457	10864550	Rt1c	8	1672	6.5	5.0	5.8	1.2	1701	chr2L	10862849	3` UTR	CR43807 -	chr2L	10863700	intron	CR43807 -	chr2L	10864550	3` UTR	CR43807 -	chr2L_8_10860001	chr2L_10860001	RG4N_1-HE
525	chr2L	10946896	10946920	chr2L	10956182	10956198	roo	5	9280	19.0	7.0	13.0	0.4	9302	chr2L	10946896	intron	dpr2 -	chr2L	10951547	intron	dpr2 -	chr2L	10956198	intron	dpr2 -	chr2L_5_10950001	chr2L_10950001	RG4N_1-HE
526	chr2L	10946931	10946968	chr2L	10956175	10956232	roo	12	9270	10.5	6.5	8.5	1.3	9301	chr2L	10946931	intron	dpr2 -	chr2L	10951582	intron	dpr2 -	chr2L	10956232	intron	dpr2 -	chr2L_12_10950001	chr2L_10950001	RG4N_1-HE
539	chr2L	11215088	11215094	chr2L	11218749	11218755	Doc	4	3660	0.0	12.0	6.0	0.6	3667	chr2L	11215088	intron	ab +	chr2L	11216922	intron	ab +	chr2L	11218755	intron	ab +	chr2L_4_11215001	chr2L_11215001	RG4N_1-HE
543	chr2L	11315209	11315270	chr2L	11317672	11317738	G2	26	2467	14.0	4.5	9.2	2.5	2529	chr2L	11315209	intergenic	not near genes	chr2L	11316474	intergenic	not near genes	chr2L	11317738	intergenic	not near genes	chr2L_26_11315001	chr2L_11315001	RG4N_1-HE
558	chr2L	11540546	11540614	chr2L	11548018	11548086	Tabor	14	7472	5.0	8.5	6.8	1.8	7540	chr2L	11540546	intergenic	not near genes	chr2L	11544316	intergenic	not near genes	chr2L	11548086	intergenic	not near genes	chr2L_14_11540001	chr2L_11540001	RG4N_1-HE
562	chr2L	11563581	11563647	chr2L	11568853	11568922	copia	21	5273	8.0	8.5	8.2	2.3	5341	chr2L	11563581	intergenic	not near genes	chr2L	11566252	intergenic	not near genes	chr2L	11568922	intergenic	not near genes	chr2L_21_11565001	chr2L_11565001	RG4N_1-HE
565	chr2L	11614042	11614078	chr2L	11615580	11615628	hopper2	4	1541	10.0	13.0	11.5	0.3	1586	chr2L	11614042	intron	kek2 +	chr2L	11614835	intron	kek2 +	chr2L	11615628	intron	kek2 +	chr2L_4_11610001	chr2L_11610001	RG4N_1-HE
567	chr2L	11713440	11713524	chr2L	11720979	11721063	blood	21	7532	1.0	8.5	4.8	3.6	7623	chr2L	11713440	intergenic	not near genes	chr2L	11717252	intergenic	not near genes	chr2L	11721063	intergenic	CR44143 +	chr2L_21_11715001	chr2L_11715001	RG4N_1-HE
580	chr2L	12067283	12067345	chr2L	12074406	12074467	297	16	7122	4.5	8.5	6.5	2.1	7184	chr2L	12067283	intergenic	not near genes	chr2L	12070875	intergenic	not near genes	chr2L	12074467	intergenic	not near genes	chr2L_16_12070001	chr2L_12070001	RG4N_1-HE
618	chr2L	12558271	12558345	chr2L	12565455	12565518	HMS-Beagle	25	7191	10.0	8.5	9.2	2.5	7247	chr2L	12558271	intergenic	not near genes	chr2L	12561894	intergenic	not near genes	chr2L	12565518	intergenic	not near genes	chr2L_25_12560001	chr2L_12560001	RG4N_1-HE
621	chr2L	12728871	12728945	chr2L	12729179	12729189	pogo	25	301	15.0	13.5	14.2	1.6	318	chr2L	12728871	intron	MRP +	chr2L	12729030	intron	MRP +	chr2L	12729189	exon	MRP +	chr2L_25_12725001	chr2L_12725001	RG4N_1-HE
622	chr2L	12731018	12731084	chr2L	12735835	12735922	F-element	26	4834	10.5	14.0	12.2	2.0	4904	chr2L	12731018	intron	MRP +	chr2L	12733470	intron	MRP +	chr2L	12735922	intron	MRP +	chr2L_26_12730001	chr2L_12730001	RG4N_1-HE
623	chr2L	12739116	12739189	chr2L	12743966	12744041	Doc	19	4849	8.0	3.0	5.5	2.9	4925	chr2L	12739116	exon	MRP +	chr2L	12741578	intron	MRP +	chr2L	12744041	exon	MRP +	chr2L_19_12740001	chr2L_12740001	RG4N_1-HE
625	chr2L	12763763	12763868	chr2L	12764045	12764125	BS	36	282	0.0	0.0	0.0	36.0	362	chr2L	12763763	intergenic	not near genes	chr2L	12763944	intergenic	not near genes	chr2L	12764125	intergenic	not near genes	chr2L_36_12760001	chr2L_12760001	RG4N_1-HE
629	chr2L	12781755	12781813	chr2L	12789255	12789326	Quasimodo	40	7508	1.0	28.5	14.8	2.5	7571	chr2L	12781755	intergenic	not near genes	chr2L	12785540	intergenic	not near genes	chr2L	12789326	intergenic	not near genes	chr2L_40_12785001	chr2L_12785001	RG4N_1-HE
630	chr2L	12791535	12791629	chr2L	12795283	12795312	F-element	51	3740	15.0	25.5	20.2	2.4	3777	chr2L	12791535	intergenic	not near genes	chr2L	12793424	intergenic	not near genes	chr2L	12795312	intergenic	not near genes	chr2L_51_12790001	chr2L_12790001	RG4N_1-HE
633	chr2L	12861600	12861714	chr2L	12863163	12863236	hobo	19	1530	0.0	6.5	3.2	4.5	1636	chr2L	12861600	intergenic	not near genes	chr2L	12862418	intergenic	not near genes	chr2L	12863236	intergenic	not near genes	chr2L_19_12860001	chr2L_12860001	RG4N_1-HE
635	chr2L	12893966	12893982	chr2L	12895504	12895513	hobo	7	1537	21.5	13.5	17.5	0.4	1547	chr2L	12893966	intergenic	not near genes	chr2L	12894740	intergenic	not near genes	chr2L	12895513	intergenic	not near genes	chr2L_7_12890001	chr2L_12890001	RG4N_1-HE
636	chr2L	12893983	12893992	chr2L	12895503	12895526	hobo	6	1526	20.0	13.0	16.5	0.3	1543	chr2L	12893983	intergenic	not near genes	chr2L	12894754	intergenic	not near genes	chr2L	12895526	intergenic	not near genes	chr2L_6_12890001	chr2L_12890001	RG4N_1-HE
637	chr2L	12894002	12894019	chr2L	12895499	12895543	hobo	5	1524	12.5	13.0	12.8	0.4	1541	chr2L	12894002	intergenic	not near genes	chr2L	12894772	intergenic	not near genes	chr2L	12895543	intergenic	not near genes	chr2L_5_12890001	chr2L_12890001	RG4N_1-HE
638	chr2L	12894020	12894045	chr2L	12895489	12895548	hobo	8	1506	10.5	10.5	10.5	0.7	1528	chr2L	12894020	intergenic	not near genes	chr2L	12894784	intergenic	not near genes	chr2L	12895548	intergenic	not near genes	chr2L_8_12890001	chr2L_12890001	RG4N_1-HE
642	chr2L	12933790	12933802	chr2L	12941328	12941340	blood	8	7538	33.0	14.5	23.8	0.3	7550	chr2L	12933790	intergenic	not near genes	chr2L	12937565	intergenic	not near genes	chr2L	12941340	intergenic	not near genes	chr2L_8_12935001	chr2L_12935001	RG4N_1-HE
643	chr2L	12933805	12933808	chr2L	12941325	12941346	blood	4	7530	32.5	13.0	22.8	0.2	7541	chr2L	12933805	intergenic	not near genes	chr2L	12937576	intergenic	not near genes	chr2L	12941346	intergenic	not near genes	chr2L_4_12935001	chr2L_12935001	RG4N_1-HE
644	chr2L	12933811	12933880	chr2L	12941317	12941342	blood	27	7527	11.0	12.5	11.8	2.1	7531	chr2L	12933811	intergenic	not near genes	chr2L	12937576	intergenic	not near genes	chr2L	12941342	intergenic	not near genes	chr2L_27_12935001	chr2L_12935001	RG4N_1-HE
650	chr2L	13036195	13036212	chr2L	13036508	13036525	X-element	5	313	17.0	0.0	8.5	0.5	330	chr2L	13036195	intron	CG9932 -	chr2L	13036360	intron	CG9932 -	chr2L	13036525	intron	CG9932 -	chr2L_5_13035001	chr2L_13035001	RG4N_1-HE
668	chr2L	13405613	13405664	chr2L	13410447	13410532	Doc	12	4864	2.5	3.5	3.0	3.0	4919	chr2L	13405613	exon	CG7110 +	chr2L	13408072	intron	CG7110 +	chr2L	13410532	exon	CG7110 +	chr2L_12_13405001	chr2L_13405001	RG4N_1-HE
669	chr2L	13449417	13449479	chr2L	13456923	13456986	Quasimodo	16	7506	3.5	6.0	4.8	2.8	7569	chr2L	13449417	intron,intron	CG42784 +,Hsp60D -	chr2L	13453202	intron	CG42784 +	chr2L	13456986	intron	CG42784 +	chr2L_16_13450001	chr2L_13450001	RG4N_1-HE
671	chr2L	13481410	13481466	chr2L	13482067	13482124	jockey	19	670	20.5	23.5	22.0	0.8	714	chr2L	13481410	intron	CG42784 +	chr2L	13481767	intron	CG42784 +	chr2L	13482124	intron	CG42784 +	chr2L_19_13480001	chr2L_13480001	RG4N_1-HE
672	chr2L	13522244	13522282	chr2L	13527618	13527660	Transpac	13	5374	0.5	16.0	8.2	1.4	5416	chr2L	13522244	intron	B4 -	chr2L	13524952	intron	B4 -	chr2L	13527660	intron	B4 -	chr2L_13_13520001	chr2L_13520001	RG4N_1-HE
676	chr2L	13560339	13560399	chr2L	13565230	13565290	F-element	25	4890	13.0	0.0	6.5	3.3	4951	chr2L	13560339	intron	kuz +	chr2L	13562814	intron	kuz +	chr2L	13565290	intron	kuz +	chr2L_25_13560001	chr2L_13560001	RG4N_1-HE
684	chr2L	13761753	13761817	chr2L	13762935	13762999	Doc	24	1176	8.0	10.0	9.0	2.4	1246	chr2L	13761753	intron	TM9SF4 +	chr2L	13762376	intron	TM9SF4 +	chr2L	13762999	intron	TM9SF4 +	chr2L_24_13760001	chr2L_13760001	RG4N_1-HE
686	chr2L	13853030	13853104	chr2L	13862239	13862335	roo	29	9220	17.5	0.0	8.8	3.0	9305	chr2L	13853030	intron	CenG1A +	chr2L	13857682	intron	CenG1A +	chr2L	13862335	intron	CenG1A +	chr2L_29_13855001	chr2L_13855001	RG4N_1-HE
713	chr2L	14465545	14465602	chr2L	14469093	14469150	hopper2	15	3548	0.5	12.5	6.5	2.0	3605	chr2L	14465545	intergenic	not near genes	chr2L	14467348	intergenic	not near genes	chr2L	14469150	intergenic	not near genes	chr2L_15_14465001	chr2L_14465001	RG4N_1-HE
721	chr2L	14618847	14618888	chr2L	14619299	14619340	jockey	23	450	12.0	0.5	6.2	3.2	493	chr2L	14618847	intron,3` UTR,3` UTR	osp -,Adh +,Adhr +	chr2L	14619094	intron	osp -	chr2L	14619340	intron	osp -	chr2L_23_14615001	chr2L_14615001	RG4N_1-HE
722	chr2L	14642532	14642550	chr2L	14651766	14651784	roo	9	9234	27.0	17.0	22.0	0.4	9252	chr2L	14642532	intron	osp -	chr2L	14647158	intron	osp -	chr2L	14651784	intron	osp -	chr2L_9_14645001	chr2L_14645001	RG4N_1-HE
723	chr2L	14642553	14642580	chr2L	14651765	14651814	roo	19	9227	17.5	17.0	17.2	1.0	9261	chr2L	14642553	intron	osp -	chr2L	14647184	intron	osp -	chr2L	14651814	intron	osp -	chr2L_19_14645001	chr2L_14645001	RG4N_1-HE
734	chr2L	14803815	14803832	chr2L	14809089	14809099	copia	7	5272	32.0	15.0	23.5	0.3	5284	chr2L	14803815	intergenic	not near genes	chr2L	14806457	intergenic	not near genes	chr2L	14809099	intergenic	not near genes	chr2L_7_14805001	chr2L_14805001	RG4N_1-HE
735	chr2L	14803833	14803901	chr2L	14809085	14809165	copia	33	5268	12.5	14.0	13.2	2.3	5332	chr2L	14803833	intergenic	not near genes	chr2L	14806499	intergenic	not near genes	chr2L	14809165	intergenic	not near genes	chr2L_33_14805001	chr2L_14805001	RG4N_1-HE
740	chr2L	14889887	14889900	chr2L	14890382	14890396	jockey	12	494	42.5	18.5	30.5	0.4	509	chr2L	14889887	intergenic	not near genes	chr2L	14890142	intergenic	not near genes	chr2L	14890396	intergenic	not near genes	chr2L_12_14890001	chr2L_14890001	RG4N_1-HE
741	chr2L	14889901	14889976	chr2L	14890381	14890457	jockey	53	493	19.0	18.0	18.5	2.7	556	chr2L	14889901	intergenic	not near genes	chr2L	14890179	intergenic	not near genes	chr2L	14890457	intergenic	not near genes	chr2L_53_14890001	chr2L_14890001	RG4N_1-HE
750	chr2L	14984323	14984390	chr2L	14991994	14992059	opus	12	7666	11.0	12.0	11.5	1.0	7736	chr2L	14984323	intron	mol -	chr2L	14988191	intron	mol -	chr2L	14992059	intron	mol -	chr2L_12_14985001	chr2L_14985001	RG4N_1-HE
781	chr2L	15445987	15446075	chr2L	15453527	15453606	blood	35	7537	12.5	0.5	6.5	4.7	7619	chr2L	15445987	intergenic	not near genes	chr2L	15449796	intergenic	not near genes	chr2L	15453606	intergenic	not near genes	chr2L_35_15445001	chr2L_15445001	RG4N_1-HE
785	chr2L	15586339	15586423	chr2L	15593461	15593516	297	18	7122	10.5	0.0	5.2	2.9	7177	chr2L	15586339	intergenic	not near genes	chr2L	15589928	intergenic	not near genes	chr2L	15593516	intergenic	not near genes	chr2L_18_15585001	chr2L_15585001	RG4N_1-HE
795	chr2L	15826827	15826889	chr2L	15829292	15829354	Tabor	30	2463	10.5	15.0	12.8	2.2	2527	chr2L	15826827	intergenic	not near genes	chr2L	15828090	intergenic	not near genes	chr2L	15829354	intergenic	not near genes	chr2L_30_15825001	chr2L_15825001	RG4N_1-HE
800	chr2L	15955971	15956043	chr2L	15957508	15957581	hobo	35	1536	12.5	13.0	12.8	2.5	1610	chr2L	15955971	intron	beat-Ib -	chr2L	15956776	intron	beat-Ib -	chr2L	15957581	intron	beat-Ib -	chr2L_35_15955001	chr2L_15955001	RG4N_1-HE
814	chr2L	16120061	16120086	chr2L	16120224	16120249	INE-1	17	162	28.0	9.5	18.8	0.9	188	chr2L	16120061	intergenic	not near genes	chr2L	16120155	intergenic	not near genes	chr2L	16120249	intergenic	not near genes	chr2L_17_16120001	chr2L_16120001	RG4N_1-HE
815	chr2L	16141108	16141122	chr2L	16146385	16146400	copia	5	5276	18.0	12.5	15.2	0.3	5292	chr2L	16141108	intergenic	not near genes	chr2L	16143754	intergenic	not near genes	chr2L	16146400	intergenic	not near genes	chr2L_5_16140001	chr2L_16140001	RG4N_1-HE
816	chr2L	16141123	16141187	chr2L	16146378	16146445	copia	29	5275	11.5	10.5	11.0	2.4	5322	chr2L	16141123	intergenic	not near genes	chr2L	16143784	intergenic	not near genes	chr2L	16146445	intergenic	not near genes	chr2L_29_16140001	chr2L_16140001	RG4N_1-HE
820	chr2L	16153674	16153687	chr2L	16160799	16160812	297	5	7125	38.5	12.5	25.5	0.2	7138	chr2L	16153674	intergenic	not near genes	chr2L	16157243	intergenic	not near genes	chr2L	16160812	intergenic	not near genes	chr2L_5_16155001	chr2L_16155001	RG4N_1-HE
821	chr2L	16153688	16153757	chr2L	16160798	16160882	297	37	7124	16.5	12.5	14.5	2.4	7194	chr2L	16153688	intergenic	not near genes	chr2L	16157285	intergenic	not near genes	chr2L	16160882	intergenic	not near genes	chr2L_37_16155001	chr2L_16155001	RG4N_1-HE
827	chr2L	16280243	16280281	chr2L	16281427	16281445	1360	14	1210	8.5	10.0	9.2	1.4	1202	chr2L	16280243	intron	crp -	chr2L	16280844	intron	crp -	chr2L	16281445	intron	crp -	chr2L_14_16280001	chr2L_16280001	RG4N_1-HE
836	chr2L	16511909	16511946	chr2L	16519094	16519131	HMS-Beagle	16	7183	17.0	10.0	13.5	1.1	7222	chr2L	16511909	intron	CG5953 -	chr2L	16515520	intron	CG5953 -	chr2L	16519131	intron	CG5953 -	chr2L_16_16515001	chr2L_16515001	RG4N_1-HE
854	chr2L	16958043	16958122	chr2L	16962902	16962981	Doc	37	4858	13.5	18.0	15.8	2.2	4938	chr2L	16958043	intergenic	not near genes	chr2L	16960512	intergenic	not near genes	chr2L	16962981	intergenic	not near genes	chr2L_37_16960001	chr2L_16960001	RG4N_1-HE
866	chr2L	17144290	17144299	chr2L	17152019	17152027	opus	8	7729	0.0	6.0	3.0	2.0	7737	chr2L	17144290	intron,intron	CG34106 +,beat-IIIa +	chr2L	17148158	intron,intron	CG34106 +,beat-IIIa +	chr2L	17152027	intron,intron	CG34106 +,beat-IIIa +	chr2L_8_17145001	chr2L_17145001	RG4N_1-HE
872	chr2L	17167511	17167589	chr2L	17167821	17167893	pogo	24	309	17.0	14.0	15.5	1.5	382	chr2L	17167511	intron,intron	CG34106 +,beat-IIIa +	chr2L	17167702	intron,intron	CG34106 +,beat-IIIa +	chr2L	17167893	intron,intron	CG34106 +,beat-IIIa +	chr2L_24_17165001	chr2L_17165001	RG4N_1-HE
873	chr2L	17199108	17199180	chr2L	17200640	17200711	hobo	30	1535	18.5	8.5	13.5	2.1	1603	chr2L	17199108	intron	beat-IIIc -	chr2L	17199910	intron	beat-IIIc -	chr2L	17200711	intron	beat-IIIc -	chr2L_30_17195001	chr2L_17195001	RG4N_1-HE
876	chr2L	17273132	17273219	chr2L	17277986	17278054	F-element	28	4849	10.0	8.5	9.2	2.7	4922	chr2L	17273132	intergenic	not near genes	chr2L	17275593	intergenic	not near genes	chr2L	17278054	intergenic	not near genes	chr2L_28_17275001	chr2L_17275001	RG4N_1-HE
880	chr2L	17335499	17335575	chr2L	17336723	17336740	1360	20	1232	10.0	8.0	9.0	2.0	1241	chr2L	17335499	intergenic	not near genes	chr2L	17336120	intergenic	not near genes	chr2L	17336740	intergenic	not near genes	chr2L_20_17335001	chr2L_17335001	RG4N_1-HE
889	chr2L	17431942	17432037	chr2L	17432124	17432216	1360	18	180	6.0	5.5	5.8	2.6	274	chr2L	17431942	intron	Dif -	chr2L	17432079	intron	Dif -	chr2L	17432216	intron	Dif -	chr2L_18_17430001	chr2L_17430001	RG4N_1-HE
905	chr2L	17687446	17687523	chr2L	17692261	17692300	F-element	55	4814	13.0	16.0	14.5	3.5	4854	chr2L	17687446	intron	CadN -	chr2L	17689873	intron	CadN -	chr2L	17692300	intron	CadN -	chr2L_55_17685001	chr2L_17685001	RG4N_1-HE
908	chr2L	17727798	17727869	chr2L	17729336	17729404	hobo	39	1532	12.5	15.0	13.8	2.6	1606	chr2L	17727798	intron	CadN -	chr2L	17728601	intron	CadN -	chr2L	17729404	intron	CadN -	chr2L_39_17725001	chr2L_17725001	RG4N_1-HE
911	chr2L	17819859	17819947	chr2L	17825133	17825145	copia	32	5269	12.0	12.0	12.0	2.5	5286	chr2L	17819859	intron	CadN2 -	chr2L	17822502	intron	CadN2 -	chr2L	17825145	intron	CadN2 -	chr2L_32_17820001	chr2L_17820001	RG4N_1-HE
916	chr2L	17911899	17911980	chr2L	17914148	17914229	pogo	19	2246	14.0	11.5	12.8	1.4	2330	chr2L	17911899	intergenic	not near genes	chr2L	17913064	intergenic	not near genes	chr2L	17914229	intergenic	CG43271 -	chr2L_19_17910001	chr2L_17910001	RG4N_1-HE
917	chr2L	17951888	17951965	chr2L	17953426	17953485	hobo	26	1536	7.0	11.5	9.2	2.5	1597	chr2L	17951888	intergenic	CR44398 -,CR44397 -	chr2L	17952686	intergenic	not near genes	chr2L	17953485	intergenic	not near genes	chr2L_26_17950001	chr2L_17950001	RG4N_1-HE
918	chr2L	18051818	18051824	chr2L	18061036	18061036	roo	5	9217	32.0	12.5	22.2	0.2	9218	chr2L	18051818	intron	rdo +	chr2L	18056427	intron	rdo +	chr2L	18061036	intron	rdo +	chr2L_5_18055001	chr2L_18055001	RG4N_1-HE
919	chr2L	18051825	18051896	chr2L	18061035	18061108	roo	17	9212	13.0	12.0	12.5	1.3	9283	chr2L	18051825	intron	rdo +	chr2L	18056466	intron	rdo +	chr2L	18061108	intron	rdo +	chr2L_17_18055001	chr2L_18055001	RG4N_1-HE
931	chr2L	18407969	18408060	chr2L	18412824	18412921	Doc	26	4860	13.0	0.0	6.5	3.5	4952	chr2L	18407969	intergenic	not near genes	chr2L	18410445	intergenic	not near genes	chr2L	18412921	intergenic	not near genes	chr2L_26_18410001	chr2L_18410001	RG4N_1-HE
958	chr2L	19147331	19147391	chr2L	19154403	19154497	297	42	7099	16.5	16.0	16.2	2.4	7166	chr2L	19147331	intron	brat +	chr2L	19150914	intron	brat +	chr2L	19154497	intron	brat +	chr2L_42_19150001	chr2L_19150001	RG4N_1-HE
969	chr2L	19344976	19345020	chr2L	19357237	19357300	blood	17	12275	10.5	11.0	10.8	1.4	12324	chr2L	19344976	intron	dnt -	chr2L	19351138	intron	dnt -	chr2L	19357300	intron	dnt -	chr2L_17_19350001	chr2L_19350001	RG4N_1-HE
970	chr2L	19345022	19345032	chr2L	19357220	19357312	blood	7	12264	9.0	5.5	7.2	0.9	12290	chr2L	19345022	intron	dnt -	chr2L	19351167	intron	dnt -	chr2L	19357312	intron	dnt -	chr2L_7_19350001	chr2L_19350001	RG4N_1-HE
982	chr2L	19620057	19620060	chr2L	19621091	19621119	jockey	4	1052	61.5	17.0	39.2	0.1	1062	chr2L	19620057	intron	Lar +	chr2L	19620588	intron	Lar +	chr2L	19621119	intron	Lar +	chr2L_4_19620001	chr2L_19620001	RG4N_1-HE
983	chr2L	19620061	19620117	chr2L	19621089	19621135	jockey	23	1042	35.0	17.0	26.0	0.9	1074	chr2L	19620061	intron	Lar +	chr2L	19620598	intron	Lar +	chr2L	19621135	intron	Lar +	chr2L_23_19620001	chr2L_19620001	RG4N_1-HE
985	chr2L	19652504	19652521	chr2L	19674011	19674028	opus	15	21507	28.5	9.0	18.8	0.8	21524	chr2L	19652504	intron	Lar +	chr2L	19663266	intron	Lar +	chr2L	19674028	intron	Lar +	chr2L_15_19660001	chr2L_19660001	RG4N_1-HE
986	chr2L	19652526	19652589	chr2L	19674010	19674096	opus	33	21505	12.0	9.0	10.5	2.9	21570	chr2L	19652526	intron	Lar +	chr2L	19663311	intron	Lar +	chr2L	19674096	intron	Lar +	chr2L_33_19660001	chr2L_19660001	RG4N_1-HE
989	chr2L	19703481	19703566	chr2L	19712686	19712762	roo	66	9203	17.0	23.0	20.0	3.1	9281	chr2L	19703481	intron	Lar +	chr2L	19708122	intron	Lar +	chr2L	19712762	intron	Lar +	chr2L_66_19705001	chr2L_19705001	RG4N_1-HE
991	chr2L	19737310	19737384	chr2L	19740829	19740888	1360	10	3522	5.5	4.0	4.8	1.7	3578	chr2L	19737310	intergenic	Nf-YB +	chr2L	19739099	intergenic	not near genes	chr2L	19740888	intergenic	not near genes	chr2L_10_19735001	chr2L_19735001	RG4N_1-HE
993	chr2L	19762746	19762825	chr2L	19763058	19763138	pogo	13	312	5.5	3.0	4.2	2.5	392	chr2L	19762746	exon	fbp -	chr2L	19762942	intron	fbp -	chr2L	19763138	intron	fbp -	chr2L_13_19760001	chr2L_19760001	RG4N_1-HE
1005	chr2L	20005817	20005896	chr2L	20010964	20011038	flea	31	5145	13.0	15.5	14.2	2.0	5221	chr2L	20005817	intron	CG43861 -	chr2L	20008428	intron	CG43861 -	chr2L	20011038	intron	CG43861 -	chr2L_31_20005001	chr2L_20005001	RG4N_1-HE
1014	chr2L	20272058	20272136	chr2L	20282838	20282868	copia	19	10778	6.5	20.0	13.2	1.3	10810	chr2L	20272058	intergenic	not near genes	chr2L	20277463	intergenic	not near genes	chr2L	20282868	intergenic	not near genes	chr2L_19_20275001	chr2L_20275001	RG4N_1-HE
1018	chr2L	20303122	20303178	chr2L	20310645	20310716	blood	8	7532	0.0	7.5	3.8	1.7	7594	chr2L	20303122	intergenic	not near genes	chr2L	20306919	intergenic	not near genes	chr2L	20310716	intergenic	not near genes	chr2L_8_20305001	chr2L_20305001	RG4N_1-HE
1023	chr2L	20372150	20372214	chr2L	20372471	20372535	pogo	26	320	14.5	8.0	11.2	2.1	385	chr2L	20372150	intergenic	Ugt37a1 -	chr2L	20372342	intergenic	Ugt37a1 -	chr2L	20372535	exon	Ugt37a1 -	chr2L_26_20370001	chr2L_20370001	RG4N_1-HE
1029	chr2L	20568552	20568636	chr2L	20569082	20569155	X-element	24	524	5.5	8.5	7.0	3.0	603	chr2L	20568552	intron	CR45347 +	chr2L	20568854	intron	CR45347 +	chr2L	20569155	intron	CR45347 +	chr2L_24_20565001	chr2L_20565001	RG4N_1-HE
1030	chr2L	20576158	20576237	chr2L	20583697	20583757	blood	22	7536	8.5	12.5	10.5	1.9	7599	chr2L	20576158	intergenic	CR45347 +	chr2L	20579958	intergenic	not near genes	chr2L	20583757	3` UTR	CR44909 -	chr2L_22_20575001	chr2L_20575001	RG4N_1-HE
1036	chr2L	20835753	20835828	chr2L	20836541	20836607	Quasimodo	13	785	9.0	13.5	11.2	1.1	854	chr2L	20835753	5` UTR	Oseg5 -	chr2L	20836180	intergenic	Oseg5 -,Spn38F -	chr2L	20836607	intergenic	Spn38F -	chr2L_13_20835001	chr2L_20835001	RG4N_1-HE
1041	chr2L	20891463	20891542	chr2L	20896635	20896714	jockey	35	5171	5.5	9.0	7.2	4.3	5251	chr2L	20891463	intron,intron	CG43739 -,sky -	chr2L	20894088	intron,intron	CG43739 -,sky -	chr2L	20896714	intron,intron	CG43739 -,sky -	chr2L_35_20890001	chr2L_20890001	RG4N_1-HE
1042	chr2L	20901450	20901490	chr2L	20902683	20902712	1360	10	1237	1.0	9.5	5.2	1.6	1262	chr2L	20901450	intron,intron	CG43739 -,sky -	chr2L	20902081	intron,intron	CG43739 -,sky -	chr2L	20902712	intron,intron	CG43739 -,sky -	chr2L_10_20900001	chr2L_20900001	RG4N_1-HE
1046	chr2L	20976589	20976659	chr2L	20981474	20981545	X-element	27	4885	8.5	9.5	9.0	2.7	4956	chr2L	20976589	intron	CG42238 -	chr2L	20979067	intron	CG42238 -	chr2L	20981545	intron	CG42238 -	chr2L_27_20975001	chr2L_20975001	RG4N_1-HE
1047	chr2L	21020228	21020302	chr2L	21023967	21024003	NOF	24	3737	10.0	18.5	14.2	1.6	3775	chr2L	21020228	intron	CG42238 -	chr2L	21022116	intron	CG42238 -	chr2L	21024003	intron	CG42238 -	chr2L_24_21020001	chr2L_21020001	RG4N_1-HE
1051	chr2L	21041078	21041167	chr2L	21049407	21049442	Tirant	47	8327	15.5	22.0	18.8	2.4	8364	chr2L	21041078	intron	CG42238 -	chr2L	21045260	intron	CG42238 -	chr2L	21049442	intron	CG42238 -	chr2L_47_21045001	chr2L_21045001	RG4N_1-HE
1070	chr2L	21337793	21337815	chr2L	21338329	21338351	BS	5	536	15.0	6.5	10.8	0.4	558	chr2L	21337793	intron	dimm +	chr2L	21338072	intron	dimm +	chr2L	21338351	intron	dimm +	chr2L_5_21335001	chr2L_21335001	RG4N_1-HE
1071	chr2L	21347492	21347569	chr2L	21355034	21355106	blood	24	7541	11.0	6.5	8.8	2.4	7614	chr2L	21347492	intron	Tsp39D +	chr2L	21351299	intron	Tsp39D +	chr2L	21355106	intron	Tsp39D +	chr2L_24_21350001	chr2L_21350001	RG4N_1-HE
1073	chr2L	21596981	21597054	chr2L	21604778	21604869	roo	12	7805	9.5	11.5	10.5	1.0	7888	chr2L	21596981	intergenic	not near genes	chr2L	21600925	intergenic	not near genes	chr2L	21604869	intergenic	not near genes	chr2L_12_21600001	chr2L_21600001	RG4N_1-HE
1075	chr2L	21653132	21653213	chr2L	21656507	21656588	invader4	30	3374	9.0	12.5	10.8	2.5	3456	chr2L	21653132	intergenic	not near genes	chr2L	21654860	intergenic	not near genes	chr2L	21656588	intergenic	not near genes	chr2L_30_21650001	chr2L_21650001	RG4N_1-HE
1076	chr2L	21691751	21691784	chr2L	21698305	21698329	Burdock	13	6553	6.5	1.0	3.8	2.7	6578	chr2L	21691751	intron	CG31619 +	chr2L	21695040	intron	CG31619 +	chr2L	21698329	intron	CG31619 +	chr2L_13_21695001	chr2L_21695001	RG4N_1-HE
1090	chr2L	21981633	21981671	chr2L	21990857	21990906	roo	13	9228	18.0	14.0	16.0	0.8	9273	chr2L	21981633	exon	CG2528 -	chr2L	21986270	intron	CG2528 -	chr2L	21990906	exon	CG2528 -	chr2L_13_21985001	chr2L_21985001	RG4N_1-HE
1091	chr2L	21981674	21981702	chr2L	21990851	21990922	roo	7	9221	11.5	12.0	11.8	0.5	9248	chr2L	21981674	exon	CG2528 -	chr2L	21986298	intron	CG2528 -	chr2L	21990922	exon	CG2528 -	chr2L_7_21985001	chr2L_21985001	RG4N_1-HE
1102	chr2L	22258550	22258633	chr2L	22260740	22260829	G6	18	2193	6.0	9.0	7.5	2.1	2279	chr2L	22258550	intergenic	Tif-IA +	chr2L	22259690	intergenic	not near genes	chr2L	22260829	intergenic	not near genes	chr2L_18_22255001	chr2L_22255001	RG4N_1-HE
1106	chr2L	22548865	22548928	chr2L	22550134	22550224	1360	25	1276	3.0	9.5	6.2	3.5	1359	chr2L	22548865	intergenic	CG17490 +	chr2L	22549544	intergenic	not near genes	chr2L	22550224	intergenic	CG17493 +	chr2L_25_22545001	chr2L_22545001	RG4N_1-HE
1107	chr2L	22581943	22581992	chr2L	22583803	22583852	S-element	5	1858	1.5	2.5	2.0	1.7	1909	chr2L	22581943	intron	CG17494 +	chr2L	22582898	intron	CG17494 +	chr2L	22583852	intron	CG17494 +	chr2L_5_22580001	chr2L_22580001	RG4N_1-HE
1110	chr2L	22679801	22679812	chr2L	22684611	22684655	F-element	5	4836	5.0	8.5	6.8	0.6	4854	chr2L	22679801	intron	CG40006 -	chr2L	22682228	intron	CG40006 -	chr2L	22684655	intron	CG40006 -	chr2L_5_22680001	chr2L_22680001	RG4N_1-HE
1111	chr2L	22711695	22711721	chr2L	22963295	22963321	Cr1a	11	251598	0.0	34.0	17.0	0.6	251626	chr2L	22711695	intron	CG40006 -	chr2L	22837508	intergenic	not near genes	chr2L	22963321	intergenic	not near genes	chr2L_11_22835001	chr2L_22835001	RG4N_1-HE
1112	chr2L	22711723	22711732	chr2L	22963300	22963317	Cr1a	6	251585	0.0	34.0	17.0	0.3	251594	chr2L	22711723	intron	CG40006 -	chr2L	22837520	intergenic	not near genes	chr2L	22963317	intergenic	not near genes	chr2L_6_22835001	chr2L_22835001	RG4N_1-HE
1115	chr2L	22776362	22776435	chr2L	22778222	22778295	S-element	21	1859	8.5	6.0	7.2	2.6	1933	chr2L	22776362	intergenic	not near genes	chr2L	22777328	intergenic	not near genes	chr2L	22778295	intergenic	not near genes	chr2L_21_22775001	chr2L_22775001	RG4N_1-HE
1119	chr2R	469915	469971	chr2R	473216	473275	F-element	6	3304	4.0	9.0	6.5	0.8	3360	chr2R	469915	intergenic	not near genes	chr2R	471595	intergenic	not near genes	chr2R	473275	intergenic	not near genes	chr2R_6_470001	chr2R_470001	RG4N_1-HE
1120	chr2R	529318	529338	chr2R	538014	538034	Max-element	5	8696	6.5	5.5	6.0	0.7	8716	chr2R	529318	intron	CG40378 +	chr2R	533676	intron	CG40378 +	chr2R	538034	intron	CG40378 +	chr2R_5_530001	chr2R_530001	RG4N_1-HE
1121	chr2R	552720	552732	chr2R	553987	554021	1360	4	1276	10.5	13.5	12.0	0.3	1301	chr2R	552720	intron	CG40378 +	chr2R	553370	intron	CG40378 +	chr2R	554021	intron	CG40378 +	chr2R_4_550001	chr2R_550001	RG4N_1-HE
1122	chr2R	552743	552782	chr2R	553983	554000	1360	11	1259	5.0	12.5	8.8	1.1	1257	chr2R	552743	intron	CG40378 +	chr2R	553372	intron	CG40378 +	chr2R	554000	intron	CG40378 +	chr2R_11_550001	chr2R_550001	RG4N_1-HE
1128	chr2R	2110449	2110457	chr2R	2118078	2118086	17.6	5	7629	53.5	15.5	34.5	0.1	7637	chr2R	2110449	intron	CG17684 -	chr2R	2114268	intron	CG17684 -	chr2R	2118086	intron	CG17684 -	chr2R_5_2110001	chr2R_2110001	RG4N_1-HE
1129	chr2R	2110459	2110466	chr2R	2118076	2118095	17.6	5	7624	50.0	14.5	32.2	0.2	7636	chr2R	2110459	intron	CG17684 -	chr2R	2114277	intron	CG17684 -	chr2R	2118095	intron	CG17684 -	chr2R_5_2110001	chr2R_2110001	RG4N_1-HE
1130	chr2R	2110467	2110502	chr2R	2118075	2118131	17.6	27	7628	25.5	14.5	20.0	1.3	7664	chr2R	2110467	intron	CG17684 -	chr2R	2114299	intron	CG17684 -	chr2R	2118131	intron	CG17684 -	chr2R_27_2110001	chr2R_2110001	RG4N_1-HE
1131	chr2R	2498931	2499005	chr2R	2508142	2508223	roo	33	9215	11.5	11.5	11.5	2.6	9292	chr2R	2498931	intron	MFS17 -	chr2R	2503577	intron	MFS17 -	chr2R	2508223	intron	MFS17 -	chr2R_33_2500001	chr2R_2500001	RG4N_1-HE
1134	chr2R	2591466	2591487	chr2R	2594212	2594233	roo	5	2746	13.0	14.5	13.8	0.3	2767	chr2R	2591466	intergenic	not near genes	chr2R	2592850	intergenic	not near genes	chr2R	2594233	intergenic	not near genes	chr2R_5_2590001	chr2R_2590001	RG4N_1-HE
1135	chr2R	2875345	2875384	chr2R	2878931	2878970	HMS-Beagle	6	3585	27.5	43.0	35.2	0.2	3625	chr2R	2875345	intergenic	not near genes	chr2R	2877158	intergenic	not near genes	chr2R	2878970	intergenic	not near genes	chr2R_6_2875001	chr2R_2875001	RG4N_1-HE
1138	chr2R	3144041	3144104	chr2R	3393389	3393453	Doc	5	249348	64.5	4.5	34.5	0.1	249412	chr2R	3144041	intron	CG42596 +	chr2R	3268747	intergenic	not near genes	chr2R	3393453	intergenic	not near genes	chr2R_5_3265001	chr2R_3265001	RG4N_1-HE
1142	chr2R	3532574	3532590	chr2R	3536088	3536103	Doc	4	3514	2.0	7.0	4.5	0.7	3529	chr2R	3532574	intergenic	not near genes	chr2R	3534338	intergenic	not near genes	chr2R	3536103	intergenic	not near genes	chr2R_4_3530001	chr2R_3530001	RG4N_1-HE
1147	chr2R	4622868	4622970	chr2R	4624116	4624198	1360	9	1237	0.0	6.0	3.0	2.2	1330	chr2R	4622868	intergenic	CR44101 -	chr2R	4623533	intergenic	not near genes	chr2R	4624198	intergenic	not near genes	chr2R_9_4620001	chr2R_4620001	RG4N_1-HE
1150	chr2R	4838838	4838897	chr2R	4840399	4840476	transib2	38	1591	17.0	16.0	16.5	2.2	1638	chr2R	4838838	intergenic	not near genes	chr2R	4839657	intergenic	not near genes	chr2R	4840476	intergenic	not near genes	chr2R_38_4835001	chr2R_4835001	RG4N_1-HE
1151	chr2R	4870701	4870742	chr2R	4871259	4871324	R1A1-element	6	577	6.5	6.5	6.5	0.8	623	chr2R	4870701	intergenic	not near genes	chr2R	4871012	intergenic	not near genes	chr2R	4871324	intergenic	not near genes	chr2R_6_4870001	chr2R_4870001	RG4N_1-HE
1162	chr2R	5417943	5418014	chr2R	5420635	5420716	Burdock	24	2701	12.0	6.5	9.2	2.4	2773	chr2R	5417943	intron	laccase2 +	chr2R	5419330	intron	laccase2 +	chr2R	5420716	intron	laccase2 +	chr2R_24_5415001	chr2R_5415001	RG4N_1-HE
1171	chr2R	5543204	5543212	chr2R	5547358	5547367	invader1	5	4155	0.0	11.5	5.8	0.7	4163	chr2R	5543204	intron	CG30438 +	chr2R	5545286	intron	CG30438 +	chr2R	5547367	intron	CG30438 +	chr2R_5_5545001	chr2R_5545001	RG4N_1-HE
1173	chr2R	5618944	5618958	chr2R	5620938	5620954	micropia	7	1995	9.5	19.0	14.2	0.5	2010	chr2R	5618944	intergenic	not near genes	chr2R	5619949	intergenic	not near genes	chr2R	5620954	intergenic	not near genes	chr2R_7_5615001	chr2R_5615001	RG4N_1-HE
1183	chr2R	5869219	5869293	chr2R	5874365	5874440	flea	35	5146	14.5	10.5	12.5	2.6	5221	chr2R	5869219	intergenic	not near genes	chr2R	5871830	intergenic	not near genes	chr2R	5874440	intergenic	not near genes	chr2R_35_5870001	chr2R_5870001	RG4N_1-HE
1186	chr2R	5902098	5902181	chr2R	5909728	5909810	17.6	29	7627	10.0	18.0	14.0	1.9	7712	chr2R	5902098	5` UTR	CG43366 +	chr2R	5905954	intron	CG43366 +	chr2R	5909810	intron	CG43366 +	chr2R_29_5905001	chr2R_5905001	RG4N_1-HE
1198	chr2R	6096660	6096699	chr2R	6101929	6101950	BS	6	5260	27.5	15.0	21.2	0.3	5290	chr2R	6096660	intron	EcR -	chr2R	6099305	intron	EcR -	chr2R	6101950	intron	EcR -	chr2R_6_6095001	chr2R_6095001	RG4N_1-HE
1199	chr2R	6096701	6096741	chr2R	6101920	6101954	BS	17	5238	18.5	12.5	15.5	1.0	5253	chr2R	6096701	intron	EcR -	chr2R	6099328	intron	EcR -	chr2R	6101954	intron	EcR -	chr2R_17_6095001	chr2R_6095001	RG4N_1-HE
1208	chr2R	6439188	6439202	chr2R	6447250	6447260	GATE	5	8060	16.5	5.0	10.8	0.4	8072	chr2R	6439188	intergenic	not near genes	chr2R	6443224	intergenic	not near genes	chr2R	6447260	intergenic	not near genes	chr2R_5_6440001	chr2R_6440001	RG4N_1-HE
1209	chr2R	6494482	6494533	chr2R	6499314	6499360	F-element	11	4826	9.0	1.5	5.2	1.8	4878	chr2R	6494482	intergenic	not near genes	chr2R	6496921	intergenic	not near genes	chr2R	6499360	intergenic	not near genes	chr2R_11_6495001	chr2R_6495001	RG4N_1-HE
1212	chr2R	6579736	6579745	chr2R	6584893	6584902	flea	5	5157	16.0	11.0	13.5	0.3	5166	chr2R	6579736	intron	jing +	chr2R	6582319	intron	jing +	chr2R	6584902	intron	jing +	chr2R_5_6580001	chr2R_6580001	RG4N_1-HE
1213	chr2R	6579746	6579792	chr2R	6584890	6584949	flea	18	5156	7.5	10.5	9.0	1.8	5203	chr2R	6579746	intron	jing +	chr2R	6582348	intron	jing +	chr2R	6584949	intron	jing +	chr2R_18_6580001	chr2R_6580001	RG4N_1-HE
1217	chr2R	6622084	6622169	chr2R	6622626	6622670	invader1	31	540	4.0	3.0	3.5	6.9	586	chr2R	6622084	intergenic	not near genes	chr2R	6622377	intergenic	not near genes	chr2R	6622670	intergenic	not near genes	chr2R_31_6620001	chr2R_6620001	RG4N_1-HE
1219	chr2R	6664126	6664162	chr2R	6665986	6666023	S-element	8	1860	9.0	4.5	6.8	1.0	1897	chr2R	6664126	intron,intron	Adf1 +,CR45128 -	chr2R	6665074	intron	Adf1 +	chr2R	6666023	intron	Adf1 +	chr2R_8_6665001	chr2R_6665001	RG4N_1-HE
1227	chr2R	6952110	6952177	chr2R	6959761	6959828	opus	14	7650	5.5	6.0	5.8	2.1	7718	chr2R	6952110	intron,intron,exon	mim -,CheB42c -,ppk25 +	chr2R	6955969	intron,intron	mim -,CheB42c -	chr2R	6959828	intron,intron	mim -,CheB42c -	chr2R_14_6955001	chr2R_6955001	RG4N_1-HE
1240	chr2R	7196516	7196587	chr2R	7201362	7201431	F-element	9	4846	3.0	5.5	4.2	1.7	4915	chr2R	7196516	intron	pk +	chr2R	7198974	intron	pk +	chr2R	7201431	intron	pk +	chr2R_9_7195001	chr2R_7195001	RG4N_1-HE
1241	chr2R	7209844	7209872	chr2R	7217658	7217704	roo	5	7825	1.5	8.0	4.8	0.9	7860	chr2R	7209844	intron	pk +	chr2R	7213774	intron	pk +	chr2R	7217704	intron	pk +	chr2R_5_7210001	chr2R_7210001	RG4N_1-HE
1242	chr2R	7235772	7235829	chr2R	7240935	7240962	jockey	6	5153	6.0	4.0	5.0	1.0	5190	chr2R	7235772	intergenic	not near genes	chr2R	7238367	intergenic	not near genes	chr2R	7240962	intergenic	not near genes	chr2R_6_7235001	chr2R_7235001	RG4N_1-HE
1248	chr2R	7434835	7434901	chr2R	7439207	7439272	Juan	12	4371	3.5	4.0	3.8	2.5	4437	chr2R	7434835	3` UTR	so +	chr2R	7437054	intergenic	not near genes	chr2R	7439272	intergenic	not near genes	chr2R_12_7435001	chr2R_7435001	RG4N_1-HE
1252	chr2R	7608365	7608445	chr2R	7613630	7613696	I-element	12	5266	6.0	0.0	3.0	3.0	5331	chr2R	7608365	intron	CG1358 -	chr2R	7611030	intron	CG1358 -	chr2R	7613696	intron	CG1358 -	chr2R_12_7610001	chr2R_7610001	RG4N_1-HE
1260	chr2R	7862211	7862250	chr2R	7867369	7867408	flea	13	5153	23.5	15.0	19.2	0.6	5197	chr2R	7862211	intron	Dgk -	chr2R	7864810	intron	Dgk -	chr2R	7867408	intron	Dgk -	chr2R_13_7860001	chr2R_7860001	RG4N_1-HE
1261	chr2R	7869134	7869194	chr2R	7873986	7874051	Doc	21	4852	12.0	14.5	13.2	1.5	4917	chr2R	7869134	intron	Dgk -	chr2R	7871592	intron	Dgk -	chr2R	7874051	intron	Dgk -	chr2R_21_7870001	chr2R_7870001	RG4N_1-HE
1274	chr2R	8330807	8330817	chr2R	8331364	8331373	roo	7	555	15.0	12.0	13.5	0.5	566	chr2R	8330807	intron	pdm3 +	chr2R	8331090	intron	pdm3 +	chr2R	8331373	intron	pdm3 +	chr2R_7_8330001	chr2R_8330001	RG4N_1-HE
1275	chr2R	8330821	8330873	chr2R	8331357	8331430	roo	16	549	9.5	11.5	10.5	1.4	609	chr2R	8330821	intron	pdm3 +	chr2R	8331126	intron	pdm3 +	chr2R	8331430	intron	pdm3 +	chr2R_16_8330001	chr2R_8330001	RG4N_1-HE
1278	chr2R	8398159	8398222	chr2R	8403007	8403052	Doc	18	4842	6.5	5.5	6.0	2.6	4893	chr2R	8398159	exon	CG2121 -	chr2R	8400606	intron	CG2121 -	chr2R	8403052	intron	CG2121 -	chr2R_18_8400001	chr2R_8400001	RG4N_1-HE
1279	chr2R	8416247	8416320	chr2R	8417142	8417215	I-element	6	890	2.5	2.0	2.2	1.9	968	chr2R	8416247	intergenic	not near genes	chr2R	8416731	intergenic	CG43296 -	chr2R	8417215	3` UTR	CG43296 -	chr2R_6_8415001	chr2R_8415001	RG4N_1-HE
1284	chr2R	8490545	8490576	chr2R	8492337	8492372	Rt1c	11	1794	20.5	21.0	20.8	0.5	1827	chr2R	8490545	intron	mtt -	chr2R	8491458	intron	mtt -	chr2R	8492372	intron	mtt -	chr2R_11_8490001	chr2R_8490001	RG4N_1-HE
1288	chr2R	8565999	8566054	chr2R	8567010	8567069	1360	9	1014	8.5	6.5	7.5	1.1	1070	chr2R	8565999	5` UTR	Cyp6a14 -	chr2R	8566534	5` UTR	Cyp6a14 -	chr2R	8567069	5` UTR	Cyp6a14 -	chr2R_9_8565001	chr2R_8565001	RG4N_1-HE
1294	chr2R	8722707	8722794	chr2R	8723017	8723044	pogo	31	296	7.5	11.5	9.5	3.0	337	chr2R	8722707	intron	CG14767 -	chr2R	8722876	intron	CG14767 -	chr2R	8723044	intron	CG14767 -	chr2R_31_8720001	chr2R_8720001	RG4N_1-HE
1295	chr2R	8777856	8777932	chr2R	8784118	8784192	diver	29	6260	12.0	10.0	11.0	2.4	6336	chr2R	8777856	intergenic	not near genes	chr2R	8781024	intergenic	not near genes	chr2R	8784192	intergenic	not near genes	chr2R_29_8780001	chr2R_8780001	RG4N_1-HE
1302	chr2R	9151244	9151320	chr2R	9157779	9157859	Burdock	13	6539	6.0	3.5	4.8	2.2	6615	chr2R	9151244	exon	CG30345 +	chr2R	9154552	intergenic	not near genes	chr2R	9157859	intergenic	CG8008 -	chr2R_13_9150001	chr2R_9150001	RG4N_1-HE
1303	chr2R	9212635	9212711	chr2R	9213192	9213231	roo	13	547	6.5	1.5	4.0	2.6	596	chr2R	9212635	intergenic	CR45309 +	chr2R	9212933	intergenic	CR45309 +	chr2R	9213231	5` UTR	CR45309 +	chr2R_13_9210001	chr2R_9210001	RG4N_1-HE
1311	chr2R	9480018	9480067	chr2R	9490619	9490655	roo	9	10600	14.5	2.0	8.2	1.0	10637	chr2R	9480018	intergenic	not near genes	chr2R	9485336	intergenic	not near genes	chr2R	9490655	intergenic	not near genes	chr2R_9_9485001	chr2R_9485001	RG4N_1-HE
1319	chr2R	9870982	9870987	chr2R	9871539	9871544	roo	5	557	21.5	8.5	15.0	0.3	562	chr2R	9870982	intron	cbx -	chr2R	9871263	intron	cbx -	chr2R	9871544	intron,5` UTR	cbx -,CG18446 +	chr2R_5_9870001	chr2R_9870001	RG4N_1-HE
1320	chr2R	9870995	9871065	chr2R	9871533	9871610	roo	27	550	7.0	6.0	6.5	3.6	615	chr2R	9870995	intron	cbx -	chr2R	9871302	intron	cbx -	chr2R	9871610	intron,5` UTR	cbx -,CG18446 +	chr2R_27_9870001	chr2R_9870001	RG4N_1-HE
1324	chr2R	9945380	9945456	chr2R	9945647	9945723	BS	25	262	11.0	9.0	10.0	2.3	343	chr2R	9945380	intron	Mef2 -	chr2R	9945552	intron	Mef2 -	chr2R	9945723	intron	Mef2 -	chr2R_25_9945001	chr2R_9945001	RG4N_1-HE
1327	chr2R	10005791	10005877	chr2R	10007027	10007072	1360	31	1223	17.0	14.0	15.5	1.9	1281	chr2R	10005791	intron	Pka-R2 -	chr2R	10006432	intron	Pka-R2 -	chr2R	10007072	intron	Pka-R2 -	chr2R_31_10005001	chr2R_10005001	RG4N_1-HE
1336	chr2R	10176828	10176838	chr2R	10186059	10186076	roo	4	9236	37.0	10.5	23.8	0.2	9248	chr2R	10176828	intron	KCNQ -	chr2R	10181452	intron	KCNQ -	chr2R	10186076	intron	KCNQ -	chr2R_4_10180001	chr2R_10180001	RG4N_1-HE
1337	chr2R	10176839	10176902	chr2R	10186055	10186140	roo	23	9236	14.0	10.0	12.0	1.8	9301	chr2R	10176839	intron	KCNQ -	chr2R	10181490	intron	KCNQ -	chr2R	10186140	intron	KCNQ -	chr2R_23_10180001	chr2R_10180001	RG4N_1-HE
1370	chr2R	10585497	10585506	chr2R	10594151	10594160	Tirant	6	8654	38.5	17.0	27.8	0.2	8663	chr2R	10585497	intron	psq +	chr2R	10589828	intron	psq +	chr2R	10594160	intron	psq +	chr2R_6_10585001	chr2R_10585001	RG4N_1-HE
1371	chr2R	10585508	10585587	chr2R	10594147	10594200	Tirant	10	8633	13.0	15.5	14.2	0.7	8692	chr2R	10585508	intron	psq +	chr2R	10589854	intron	psq +	chr2R	10594200	intron	psq +	chr2R_10_10585001	chr2R_10585001	RG4N_1-HE
1389	chr2R	10947989	10948045	chr2R	10955575	10955667	17.6	11	7602	0.0	6.0	3.0	2.8	7678	chr2R	10947989	intergenic	not near genes	chr2R	10951828	intergenic	not near genes	chr2R	10955667	intergenic	not near genes	chr2R_11_10950001	chr2R_10950001	RG4N_1-HE
1393	chr2R	10979603	10979669	chr2R	10980129	10980209	297	6	534	3.0	5.5	4.2	1.2	606	chr2R	10979603	intergenic	not near genes	chr2R	10979906	intergenic	not near genes	chr2R	10980209	intergenic	not near genes	chr2R_6_10975001	chr2R_10975001	RG4N_1-HE
1394	chr2R	11009756	11009792	chr2R	11019001	11019036	roo	11	9240	14.5	10.0	12.2	0.8	9280	chr2R	11009756	intron	luna -	chr2R	11014396	intron	luna -	chr2R	11019036	intron	luna -	chr2R_11_11010001	chr2R_11010001	RG4N_1-HE
1395	chr2R	11009793	11009838	chr2R	11018997	11019021	roo	11	9225	5.5	9.0	7.2	1.3	9228	chr2R	11009793	intron	luna -	chr2R	11014407	intron	luna -	chr2R	11019021	intron	luna -	chr2R_11_11010001	chr2R_11010001	RG4N_1-HE
1396	chr2R	11019819	11019898	chr2R	11024956	11025019	jockey	14	5128	7.5	2.5	5.0	2.3	5200	chr2R	11019819	intron	luna -	chr2R	11022419	intron	luna -	chr2R	11025019	intron	luna -	chr2R_14_11020001	chr2R_11020001	RG4N_1-HE
1404	chr2R	11207764	11207806	chr2R	11208027	11208069	BS	30	260	41.0	26.5	33.8	0.9	305	chr2R	11207764	intron	shn +	chr2R	11207916	intron	shn +	chr2R	11208069	intron	shn +	chr2R_30_11205001	chr2R_11205001	RG4N_1-HE
1405	chr2R	11207807	11207808	chr2R	11208016	11208070	BS	5	251	41.0	23.5	32.2	0.2	263	chr2R	11207807	intron	shn +	chr2R	11207938	intron	shn +	chr2R	11208070	intron	shn +	chr2R_5_11205001	chr2R_11205001	RG4N_1-HE
1406	chr2R	11207809	11207836	chr2R	11208011	11208088	BS	29	258	26.5	21.5	24.0	1.2	279	chr2R	11207809	intron	shn +	chr2R	11207948	intron	shn +	chr2R	11208088	intron	shn +	chr2R_29_11205001	chr2R_11205001	RG4N_1-HE
1408	chr2R	11247156	11247165	chr2R	11247312	11247321	INE-1	5	156	7.5	28.5	18.0	0.3	165	chr2R	11247156	intergenic	not near genes	chr2R	11247238	intergenic	not near genes	chr2R	11247321	intergenic	not near genes	chr2R_5_11245001	chr2R_11245001	RG4N_1-HE
1410	chr2R	11297575	11297624	chr2R	11301967	11301993	flea	15	4390	8.5	2.5	5.5	2.3	4418	chr2R	11297575	intergenic	CG42336 -	chr2R	11299784	intergenic	not near genes	chr2R	11301993	5` UTR	CG7741 +	chr2R_15_11295001	chr2R_11295001	RG4N_1-HE
1411	chr2R	11415461	11415550	chr2R	11418679	11418738	opus	36	3211	11.0	17.5	14.2	2.4	3277	chr2R	11415461	intron,3` UTR	Drip -,CG7763 +	chr2R	11417100	intron	Drip -	chr2R	11418738	intron	Drip -	chr2R_36_11415001	chr2R_11415001	RG4N_1-HE
1412	chr2R	11472603	11472673	chr2R	11473850	11473893	pogo	24	1263	6.0	5.0	5.5	3.7	1290	chr2R	11472603	intergenic	not near genes	chr2R	11473248	intergenic	not near genes	chr2R	11473893	intergenic	not near genes	chr2R_24_11470001	chr2R_11470001	RG4N_1-HE
1444	chr2R	12481138	12481163	chr2R	12482946	12482965	roo	8	1834	1.0	8.0	4.5	1.5	1827	chr2R	12481138	exon	Dh44-R2 +	chr2R	12482052	intron	Dh44-R2 +	chr2R	12482965	intron	Dh44-R2 +	chr2R_8_12480001	chr2R_12480001	RG4N_1-HE
1451	chr2R	12707459	12707547	chr2R	12715896	12715971	roo	13	8435	7.5	0.5	4.0	2.6	8512	chr2R	12707459	intron	CG42663 +	chr2R	12711715	intron	CG42663 +	chr2R	12715971	intron	CG42663 +	chr2R_13_12710001	chr2R_12710001	RG4N_1-HE
1456	chr2R	12789232	12789322	chr2R	12797658	12797724	roo	18	8410	2.5	5.5	4.0	3.6	8492	chr2R	12789232	intron,3` UTR	sca +,CR45137 -	chr2R	12793478	intron,intron	sca +,CR45137 -	chr2R	12797724	intron,3` UTR	sca +,CR45137 -	chr2R_18_12790001	chr2R_12790001	RG4N_1-HE
1458	chr2R	12819406	12819474	chr2R	12824526	12824594	jockey	30	5128	6.5	12.0	9.2	2.9	5188	chr2R	12819406	intergenic	not near genes	chr2R	12822000	intergenic	not near genes	chr2R	12824594	intergenic	not near genes	chr2R_30_12820001	chr2R_12820001	RG4N_1-HE
1466	chr2R	13136777	13136854	chr2R	13141646	13141723	Doc	13	4864	4.5	0.5	2.5	3.7	4946	chr2R	13136777	exon	Cap-G +	chr2R	13139250	intron	Cap-G +	chr2R	13141723	intron	Cap-G +	chr2R_13_13135001	chr2R_13135001	RG4N_1-HE
1491	chr2R	13728060	13728138	chr2R	13735791	13735869	opus	36	7730	16.0	11.5	13.8	2.4	7809	chr2R	13728060	intron	fas +	chr2R	13731964	intron	fas +	chr2R	13735869	intron	fas +	chr2R_36_13730001	chr2R_13730001	RG4N_1-HE
1497	chr2R	13905531	13905629	chr2R	13907584	13907636	Rt1a	6	2040	0.0	7.5	3.8	1.2	2105	chr2R	13905531	intron	shot -	chr2R	13906584	intron	shot -	chr2R	13907636	intron	shot -	chr2R_6_13905001	chr2R_13905001	RG4N_1-HE
1512	chr2R	14467239	14467293	chr2R	14476462	14476515	roo	14	9219	11.5	7.0	9.2	1.4	9276	chr2R	14467239	intergenic	not near genes	chr2R	14471877	intergenic	not near genes	chr2R	14476515	5` UTR	CR44462 +	chr2R_14_14470001	chr2R_14470001	RG4N_1-HE
1516	chr2R	14497331	14497404	chr2R	14498567	14498641	1360	35	1236	17.0	17.5	17.2	1.9	1310	chr2R	14497331	intergenic	Cpsf160 -,L +	chr2R	14497986	intron	Cpsf160 -	chr2R	14498641	3` UTR	Cpsf160 -	chr2R_35_14495001	chr2R_14495001	RG4N_1-HE
1537	chr2R	14889154	14889240	chr2R	14897833	14897911	Max-element	26	8672	15.0	0.0	7.5	3.1	8757	chr2R	14889154	intergenic	Cyp6a8 -	chr2R	14893532	intergenic	not near genes	chr2R	14897911	intergenic	not near genes	chr2R_26_14890001	chr2R_14890001	RG4N_1-HE
1544	chr2R	15004663	15004761	chr2R	15005062	15005155	jockey	18	398	6.5	0.0	3.2	4.3	492	chr2R	15004663	intergenic	not near genes	chr2R	15004909	intergenic	not near genes	chr2R	15005155	intergenic	not near genes	chr2R_18_15000001	chr2R_15000001	RG4N_1-HE
1545	chr2R	15015392	15015480	chr2R	15022885	15022946	mdg1	25	7489	9.5	9.0	9.2	2.5	7554	chr2R	15015392	intron	hbs +	chr2R	15019169	intron	hbs +	chr2R	15022946	intron	hbs +	chr2R_25_15015001	chr2R_15015001	RG4N_1-HE
1548	chr2R	15084920	15084992	chr2R	15092032	15092108	297	17	7118	13.5	5.5	9.5	1.6	7188	chr2R	15084920	intergenic	not near genes	chr2R	15088514	intergenic	not near genes	chr2R	15092108	5` UTR	CR44457 +	chr2R_17_15085001	chr2R_15085001	RG4N_1-HE
1553	chr2R	15119269	15119282	chr2R	15127817	15127828	Tirant	9	8550	38.0	21.0	29.5	0.3	8559	chr2R	15119269	intron	chn +	chr2R	15123548	intron	chn +	chr2R	15127828	intron	chn +	chr2R_9_15120001	chr2R_15120001	RG4N_1-HE
1554	chr2R	15119284	15119339	chr2R	15127813	15127873	Tirant	58	8540	22.5	21.0	21.8	2.5	8589	chr2R	15119284	intron	chn +	chr2R	15123578	intron	chn +	chr2R	15127873	intron	chn +	chr2R_58_15120001	chr2R_15120001	RG4N_1-HE
1562	chr2R	15340631	15340647	chr2R	15349284	15349300	Tirant	10	8653	18.5	12.5	15.5	0.6	8669	chr2R	15340631	intron	unc-5 +	chr2R	15344966	intron	unc-5 +	chr2R	15349300	intron	unc-5 +	chr2R_10_15340001	chr2R_15340001	RG4N_1-HE
1563	chr2R	15340651	15340658	chr2R	15349283	15349284	Tirant	4	8636	17.0	12.5	14.8	0.3	8633	chr2R	15340651	intron	unc-5 +	chr2R	15344968	intron	unc-5 +	chr2R	15349284	intron	unc-5 +	chr2R_4_15340001	chr2R_15340001	RG4N_1-HE
1584	chr2R	16061690	16061701	chr2R	16064368	16064394	Burdock	7	2690	14.5	6.5	10.5	0.6	2704	chr2R	16061690	intergenic	not near genes	chr2R	16063042	intergenic	not near genes	chr2R	16064394	intergenic	not near genes	chr2R_7_16060001	chr2R_16060001	RG4N_1-HE
1585	chr2R	16061703	16061708	chr2R	16064364	16064410	Burdock	6	2695	13.0	6.0	9.5	0.6	2707	chr2R	16061703	intergenic	not near genes	chr2R	16063056	intergenic	not near genes	chr2R	16064410	intergenic	not near genes	chr2R_6_16060001	chr2R_16060001	RG4N_1-HE
1599	chr2R	16539567	16539633	chr2R	16544844	16544941	copia	13	5289	17.0	0.5	8.8	1.3	5374	chr2R	16539567	intergenic	not near genes	chr2R	16542254	intergenic	not near genes	chr2R	16544941	intergenic	not near genes	chr2R_13_16540001	chr2R_16540001	RG4N_1-HE
1628	chr2R	17176273	17176378	chr2R	17182543	17182639	diver	5	6272	0.0	6.0	3.0	1.2	6366	chr2R	17176273	intergenic	not near genes	chr2R	17179456	intergenic	not near genes	chr2R	17182639	intergenic	not near genes	chr2R_5_17175001	chr2R_17175001	RG4N_1-HE
1629	chr2R	17236451	17236520	chr2R	17241726	17241787	copia	21	5267	8.5	16.0	12.2	1.6	5336	chr2R	17236451	intron	mbl +	chr2R	17239119	intron	mbl +	chr2R	17241787	intron	mbl +	chr2R_21_17235001	chr2R_17235001	RG4N_1-HE
1632	chr2R	17277160	17277236	chr2R	17277636	17277692	jockey	6	475	11.5	8.0	9.8	0.6	532	chr2R	17277160	intron	mbl +	chr2R	17277426	intron	mbl +	chr2R	17277692	intron	mbl +	chr2R_6_17275001	chr2R_17275001	RG4N_1-HE
1643	chr2R	17485863	17485932	chr2R	17490696	17490763	F-element	18	4829	6.0	6.0	6.0	2.6	4900	chr2R	17485863	5` UTR,intron	CG43110 -,NT5E-2 +	chr2R	17488313	intron	NT5E-2 +	chr2R	17490763	intron	NT5E-2 +	chr2R_18_17485001	chr2R_17485001	RG4N_1-HE
1657	chr2R	17783967	17784057	chr2R	17784278	17784347	pogo	38	305	11.5	16.5	14.0	2.5	380	chr2R	17783967	intergenic	mir-31a -	chr2R	17784157	intergenic	mir-31a -	chr2R	17784347	intergenic	mir-31a -	chr2R_38_17780001	chr2R_17780001	RG4N_1-HE
1674	chr2R	18045611	18045678	chr2R	18046034	18046101	jockey	12	422	11.5	6.0	8.8	1.2	490	chr2R	18045611	intergenic	not near genes	chr2R	18045856	intergenic	not near genes	chr2R	18046101	intergenic	CG5767 -	chr2R_12_18045001	chr2R_18045001	RG4N_1-HE
1677	chr2R	18111623	18111685	chr2R	18115562	18115602	F-element	9	3935	10.5	0.5	5.5	1.4	3979	chr2R	18111623	intergenic	not near genes	chr2R	18113612	intergenic	not near genes	chr2R	18115602	intergenic	not near genes	chr2R_9_18110001	chr2R_18110001	RG4N_1-HE
1682	chr2R	18358328	18358409	chr2R	18372611	18372692	roo	26	14279	10.0	7.5	8.8	2.7	14364	chr2R	18358328	intergenic	not near genes	chr2R	18365510	intergenic	not near genes	chr2R	18372692	intergenic	not near genes	chr2R_26_18365001	chr2R_18365001	RG4N_1-HE
1685	chr2R	18487768	18487851	chr2R	18495289	18495358	blood	21	7513	2.0	7.5	4.8	3.6	7590	chr2R	18487768	intron	CG30116 -	chr2R	18491563	intron	CG30116 -	chr2R	18495358	intron	CG30116 -	chr2R_21_18490001	chr2R_18490001	RG4N_1-HE
1690	chr2R	18575731	18575802	chr2R	18581990	18582061	3S18	8	6251	8.5	4.0	6.2	1.1	6330	chr2R	18575731	intron	GEFmeso -	chr2R	18578896	intron	GEFmeso -	chr2R	18582061	intron	GEFmeso -	chr2R_8_18575001	chr2R_18575001	RG4N_1-HE
1691	chr2R	18575808	18575825	chr2R	18581986	18582063	3S18	22	6216	5.5	4.0	4.8	3.8	6255	chr2R	18575808	intron	GEFmeso -	chr2R	18578936	intron	GEFmeso -	chr2R	18582063	intron	GEFmeso -	chr2R_22_18575001	chr2R_18575001	RG4N_1-HE
1692	chr2R	18590804	18590840	chr2R	18600026	18600063	roo	8	9214	10.5	5.5	8.0	0.9	9259	chr2R	18590804	intron	GEFmeso -	chr2R	18595434	intron	GEFmeso -	chr2R	18600063	intron	GEFmeso -	chr2R_8_18595001	chr2R_18595001	RG4N_1-HE
1693	chr2R	18590843	18590899	chr2R	18600025	18600050	roo	12	9204	4.5	5.5	5.0	2.0	9207	chr2R	18590843	intron	GEFmeso -	chr2R	18595446	intron	GEFmeso -	chr2R	18600050	intron	GEFmeso -	chr2R_12_18595001	chr2R_18595001	RG4N_1-HE
1749	chr2R	19715805	19715856	chr2R	19723345	19723381	blood	11	7534	7.5	7.0	7.2	1.3	7576	chr2R	19715805	intergenic	not near genes	chr2R	19719593	intergenic	not near genes	chr2R	19723381	intergenic	not near genes	chr2R_11_19715001	chr2R_19715001	RG4N_1-HE
1750	chr2R	19776538	19776612	chr2R	19779930	19780006	jockey	16	3388	7.5	6.5	7.0	2.0	3468	chr2R	19776538	intergenic	not near genes	chr2R	19778272	intergenic	not near genes	chr2R	19780006	intergenic	not near genes	chr2R_16_19775001	chr2R_19775001	RG4N_1-HE
1755	chr2R	19957384	19957403	chr2R	19962636	19962676	copia	16	5269	25.5	12.5	19.0	0.8	5292	chr2R	19957384	intergenic	CG44623 +	chr2R	19960030	intergenic	not near genes	chr2R	19962676	intergenic	not near genes	chr2R_16_19960001	chr2R_19960001	RG4N_1-HE
1756	chr2R	19957406	19957454	chr2R	19962633	19962712	copia	27	5256	8.5	12.5	10.5	2.3	5306	chr2R	19957406	intergenic	CG44623 +	chr2R	19960059	intergenic	not near genes	chr2R	19962712	intergenic	not near genes	chr2R_27_19960001	chr2R_19960001	RG4N_1-HE
1765	chr2R	20069166	20069243	chr2R	20071875	20071951	opus	11	2698	4.5	7.5	6.0	1.6	2785	chr2R	20069166	intergenic	not near genes	chr2R	20070558	intergenic	not near genes	chr2R	20071951	intergenic	not near genes	chr2R_11_20070001	chr2R_20070001	RG4N_1-HE
1774	chr2R	20368457	20368494	chr2R	20377691	20377709	roo	7	9230	14.5	9.5	12.0	0.5	9252	chr2R	20368457	intergenic	not near genes	chr2R	20373083	intergenic	not near genes	chr2R	20377709	intergenic	not near genes	chr2R_7_20370001	chr2R_20370001	RG4N_1-HE
1800	chr2R	20739404	20739424	chr2R	20744217	20744246	F-element	5	4820	26.5	12.0	19.2	0.2	4842	chr2R	20739404	intron	dpr +	chr2R	20741825	intron	dpr +	chr2R	20744246	intron	dpr +	chr2R_5_20740001	chr2R_20740001	RG4N_1-HE
1801	chr2R	20739430	20739470	chr2R	20744216	20744294	F-element	18	4829	12.0	12.0	12.0	1.4	4864	chr2R	20739430	intron	dpr +	chr2R	20741862	intron	dpr +	chr2R	20744294	intron	dpr +	chr2R_18_20740001	chr2R_20740001	RG4N_1-HE
1803	chr2R	20783260	20783329	chr2R	20788091	20788172	F-element	14	4835	9.5	5.0	7.2	1.7	4912	chr2R	20783260	intergenic	not near genes	chr2R	20785716	intergenic	not near genes	chr2R	20788172	intergenic	CG43666 -	chr2R_14_20785001	chr2R_20785001	RG4N_1-HE
1814	chr2R	21151075	21151144	chr2R	21153758	21153845	opus	4	2696	2.0	5.0	3.5	0.9	2770	chr2R	21151075	exon	CG30389 -	chr2R	21152460	intron	CG30389 -	chr2R	21153845	intron	CG30389 -	chr2R_4_21150001	chr2R_21150001	RG4N_1-HE
1830	chr2R	21738222	21738248	chr2R	21747438	21747449	roo	4	9211	9.0	10.5	9.8	0.4	9227	chr2R	21738222	intergenic	not near genes	chr2R	21742836	intergenic	not near genes	chr2R	21747449	intergenic	not near genes	chr2R_4_21740001	chr2R_21740001	RG4N_1-HE
1831	chr2R	21738249	21738263	chr2R	21747437	21747473	roo	7	9212	8.5	9.5	9.0	0.7	9224	chr2R	21738249	intergenic	not near genes	chr2R	21742861	intergenic	not near genes	chr2R	21747473	intergenic	not near genes	chr2R_7_21740001	chr2R_21740001	RG4N_1-HE
1832	chr2R	21753023	21753098	chr2R	21753579	21753654	roo	36	550	18.5	20.0	19.2	1.8	631	chr2R	21753023	intergenic	not near genes	chr2R	21753338	intergenic	not near genes	chr2R	21753654	intergenic	not near genes	chr2R_36_21750001	chr2R_21750001	RG4N_1-HE
1835	chr2R	21809462	21809537	chr2R	21817774	21817848	roo	27	8310	9.0	6.0	7.5	3.2	8386	chr2R	21809462	intergenic	not near genes	chr2R	21813655	intergenic	not near genes	chr2R	21817848	intergenic	not near genes	chr2R_27_21810001	chr2R_21810001	RG4N_1-HE
1855	chr2R	22349640	22349668	chr2R	22351495	22351522	jockey	9	1853	21.0	14.5	17.8	0.5	1882	chr2R	22349640	intron	Liprin-gamma -	chr2R	22350581	intron	Liprin-gamma -	chr2R	22351522	intron	Liprin-gamma -	chr2R_9_22350001	chr2R_22350001	RG4N_1-HE
1856	chr2R	22349670	22349711	chr2R	22351488	22351550	jockey	20	1850	14.5	14.0	14.2	1.3	1880	chr2R	22349670	intron	Liprin-gamma -	chr2R	22350610	intron	Liprin-gamma -	chr2R	22351550	intron	Liprin-gamma -	chr2R_20_22350001	chr2R_22350001	RG4N_1-HE
1869	chr2R	22465268	22465337	chr2R	22465529	22465606	BS	24	268	17.5	9.5	13.5	1.7	338	chr2R	22465268	intron	CG10384 +	chr2R	22465437	intron	CG10384 +	chr2R	22465606	intron	CG10384 +	chr2R_24_22465001	chr2R_22465001	RG4N_1-HE
1872	chr2R	22525697	22525776	chr2R	22529323	22529386	jockey	13	3621	6.0	12.5	9.2	1.3	3689	chr2R	22525697	intron	px -	chr2R	22527542	intron	px -	chr2R	22529386	intron	px -	chr2R_13_22525001	chr2R_22525001	RG4N_1-HE
1875	chr2R	22580391	22580445	chr2R	22586612	22586648	diver	8	6219	4.0	7.0	5.5	1.2	6257	chr2R	22580391	intron	dnr1 -	chr2R	22583520	intron	dnr1 -	chr2R	22586648	intron	dnr1 -	chr2R_8_22580001	chr2R_22580001	RG4N_1-HE
1878	chr2R	22774908	22774914	chr2R	22775398	22775404	jockey	5	489	16.5	8.5	12.5	0.4	496	chr2R	22774908	intron	CG42260 -	chr2R	22775156	intron	CG42260 -	chr2R	22775404	intron	CG42260 -	chr2R_5_22775001	chr2R_22775001	RG4N_1-HE
1879	chr2R	22774916	22774966	chr2R	22775394	22775456	jockey	20	488	9.5	7.5	8.5	2.1	540	chr2R	22774916	intron	CG42260 -	chr2R	22775186	intron	CG42260 -	chr2R	22775456	intron	CG42260 -	chr2R_20_22775001	chr2R_22775001	RG4N_1-HE
1884	chr2R	22843002	22843036	chr2R	22845039	22845073	flea	8	2036	10.5	7.0	8.8	0.8	2071	chr2R	22843002	intergenic	CG9826 +	chr2R	22844038	intergenic	not near genes	chr2R	22845073	intergenic	not near genes	chr2R_8_22840001	chr2R_22840001	RG4N_1-HE
1898	chr2R	23402566	23402609	chr2R	23407684	23407727	flea	7	5117	0.5	3.0	1.8	2.5	5161	chr2R	23402566	intergenic	CG3520 -	chr2R	23405146	intergenic	not near genes	chr2R	23407727	intergenic	not near genes	chr2R_7_23405001	chr2R_23405001	RG4N_1-HE
1905	chr2R	23529553	23529575	chr2R	23537156	23537209	412	7	7621	4.5	3.0	3.8	1.5	7656	chr2R	23529553	intron	bw -	chr2R	23533381	intron	bw -	chr2R	23537209	exon	bw -	chr2R_7_23530001	chr2R_23530001	RG4N_1-HE
1911	chr2R	23914255	23914325	chr2R	23921946	23922020	412	17	7687	3.0	7.0	5.0	2.8	7765	chr2R	23914255	exon	kcc +	chr2R	23918138	intron	kcc +	chr2R	23922020	exon	kcc +	chr2R_17_23915001	chr2R_23915001	RG4N_1-HE
1915	chr2R	24147030	24147087	chr2R	24154647	24154736	412	18	7632	2.5	5.0	3.8	3.8	7706	chr2R	24147030	intron	Dat +	chr2R	24150883	intron	Dat +	chr2R	24154736	intron	Dat +	chr2R_18_24150001	chr2R_24150001	RG4N_1-HE
1916	chr2R	24177177	24177233	chr2R	24184733	24184789	412	7	7555	4.0	4.0	4.0	1.4	7612	chr2R	24177177	3` UTR	Nop60B +	chr2R	24180983	intron	Nop60B +	chr2R	24184789	3` UTR	Nop60B +	chr2R_7_24180001	chr2R_24180001	RG4N_1-HE
1929	chr2R	24647550	24647585	chr2R	24655166	24655187	412	5	7615	7.5	3.5	5.5	0.8	7637	chr2R	24647550	intergenic	not near genes	chr2R	24651368	intergenic	not near genes	chr2R	24655187	intergenic	not near genes	chr2R_5_24650001	chr2R_24650001	RG4N_1-HE
1931	chr2R	24727844	24727901	chr2R	24735404	24735476	mdg1	11	7568	3.5	10.0	6.8	1.4	7632	chr2R	24727844	intron	Mid1 -	chr2R	24731660	intron	Mid1 -	chr2R	24735476	intron	Mid1 -	chr2R_11_24730001	chr2R_24730001	RG4N_1-HE
1934	chr2R	24763566	24763633	chr2R	24765613	24765680	G2	6	2038	2.0	2.0	2.0	2.0	2114	chr2R	24763566	exon	CG3894 +	chr2R	24764623	intron	CG3894 +	chr2R	24765680	exon	CG3894 +	chr2R_6_24760001	chr2R_24760001	RG4N_1-HE
1944	chr2R	25141603	25141640	chr2R	25159353	25159401	roo	16	17757	22.0	12.0	17.0	0.9	17798	chr2R	25141603	intergenic	not near genes	chr2R	25150502	intergenic	not near genes	chr2R	25159401	intergenic	not near genes	chr2R_16_25150001	chr2R_25150001	RG4N_1-HE
1945	chr2R	25141644	25141673	chr2R	25159349	25159434	roo	15	17756	14.5	10.5	12.5	1.1	17790	chr2R	25141644	intergenic	not near genes	chr2R	25150539	intergenic	not near genes	chr2R	25159434	intergenic	not near genes	chr2R_15_25150001	chr2R_25150001	RG4N_1-HE
1948	chr3L	110155	110229	chr3L	119392	119466	roo	30	9235	12.0	9.0	10.5	2.6	9311	chr3L	110155	intergenic	not near genes	chr3L	114810	intergenic	not near genes	chr3L	119466	intergenic	not near genes	chr3L_30_110001	chr3L_110001	RG4N_1-HE
1956	chr3L	402651	402707	chr3L	409745	409809	297	43	7111	23.0	21.5	22.2	1.9	7158	chr3L	402651	intergenic	not near genes	chr3L	406230	intergenic	not near genes	chr3L	409809	intergenic	not near genes	chr3L_43_405001	chr3L_405001	RG4N_1-HE
1971	chr3L	789855	789946	chr3L	790411	790492	roo	22	555	11.5	11.5	11.5	1.8	637	chr3L	789855	intergenic	not near genes	chr3L	790174	intergenic	not near genes	chr3L	790492	intergenic	not near genes	chr3L_22_790001	chr3L_790001	RG4N_1-HE
1972	chr3L	857969	858027	chr3L	866482	866515	Tirant	7	8521	5.0	7.0	6.0	1.0	8546	chr3L	857969	intergenic	not near genes	chr3L	862242	intergenic	not near genes	chr3L	866515	5` UTR	CG12502 +	chr3L_7_860001	chr3L_860001	RG4N_1-HE
1974	chr3L	925146	925175	chr3L	932642	932672	mdg1	6	7497	7.5	8.0	7.8	0.7	7526	chr3L	925146	intron	Glut1 +	chr3L	928909	intron	Glut1 +	chr3L	932672	intron	Glut1 +	chr3L_6_925001	chr3L_925001	RG4N_1-HE
1975	chr3L	925181	925195	chr3L	932637	932686	mdg1	5	7483	7.5	6.5	7.0	0.6	7505	chr3L	925181	intron	Glut1 +	chr3L	928934	intron	Glut1 +	chr3L	932686	intron	Glut1 +	chr3L_5_925001	chr3L_925001	RG4N_1-HE
1976	chr3L	939741	939790	chr3L	940907	940960	jockey	21	1189	6.5	4.0	5.2	3.4	1219	chr3L	939741	intron	Glut1 +	chr3L	940350	intron	Glut1 +	chr3L	940960	intron	Glut1 +	chr3L_21_940001	chr3L_940001	RG4N_1-HE
1981	chr3L	1047317	1047374	chr3L	1055168	1055246	412	8	7857	4.5	5.0	4.8	1.4	7929	chr3L	1047317	intron	bab1 -	chr3L	1051282	intron	bab1 -	chr3L	1055246	intron	bab1 -	chr3L_8_1050001	chr3L_1050001	RG4N_1-HE
1989	chr3L	1154072	1154134	chr3L	1163293	1163355	roo	6	9220	4.5	1.0	2.8	1.6	9283	chr3L	1154072	intron	bab2 -	chr3L	1158714	intron	bab2 -	chr3L	1163355	intron	bab2 -	chr3L_6_1155001	chr3L_1155001	RG4N_1-HE
1990	chr3L	1219543	1219610	chr3L	1227342	1227391	412	10	7791	2.5	5.5	4.0	2.0	7848	chr3L	1219543	intron	mwh +	chr3L	1223467	intron	mwh +	chr3L	1227391	intron	mwh +	chr3L_10_1220001	chr3L_1220001	RG4N_1-HE
2002	chr3L	1424699	1424773	chr3L	1430023	1430092	Rt1a	16	5311	0.0	13.0	6.5	2.1	5393	chr3L	1424699	intron	Ptp61F -	chr3L	1427396	intron	Ptp61F -	chr3L	1430092	intron	Ptp61F -	chr3L_16_1425001	chr3L_1425001	RG4N_1-HE
2004	chr3L	1485727	1485736	chr3L	1486923	1486958	1360	4	1213	6.0	7.5	6.8	0.5	1231	chr3L	1485727	intron	stet -	chr3L	1486342	intron	stet -	chr3L	1486958	intron	stet -	chr3L_4_1485001	chr3L_1485001	RG4N_1-HE
2005	chr3L	1505971	1505981	chr3L	1513601	1513610	17.6	4	7630	18.0	8.5	13.2	0.3	7639	chr3L	1505971	intron,intron	Psa +,cue -	chr3L	1509790	intron,intron	Psa +,cue -	chr3L	1513610	intron,intron	Psa +,cue -	chr3L_4_1505001	chr3L_1505001	RG4N_1-HE
2006	chr3L	1505986	1506031	chr3L	1513600	1513661	17.6	8	7627	7.5	8.0	7.8	0.9	7675	chr3L	1505986	intron,intron	Psa +,cue -	chr3L	1509824	intron,intron	Psa +,cue -	chr3L	1513661	intron,intron	Psa +,cue -	chr3L_8_1505001	chr3L_1505001	RG4N_1-HE
2026	chr3L	2108188	2108211	chr3L	2113463	2113484	copia	11	5275	9.0	2.0	5.5	1.7	5296	chr3L	2108188	intron	sls -	chr3L	2110836	intron	sls -	chr3L	2113484	intron	sls -	chr3L_11_2110001	chr3L_2110001	RG4N_1-HE
2027	chr3L	2108219	2108257	chr3L	2113452	2113532	copia	4	5264	2.5	1.0	1.8	1.4	5313	chr3L	2108219	intron	sls -	chr3L	2110876	intron	sls -	chr3L	2113532	intron	sls -	chr3L_4_2110001	chr3L_2110001	RG4N_1-HE
2042	chr3L	2447458	2447527	chr3L	2456685	2456736	roo	11	9223	6.5	7.0	6.8	1.4	9278	chr3L	2447458	intron	CG45186 +	chr3L	2452097	intron	CG45186 +	chr3L	2456736	intron	CG45186 +	chr3L_11_2450001	chr3L_2450001	RG4N_1-HE
2067	chr3L	2751402	2751457	chr3L	2755766	2755817	F-element	22	4363	3.0	18.5	10.8	1.9	4415	chr3L	2751402	intron	Mrtf -	chr3L	2753610	intron	Mrtf -	chr3L	2755817	intron	Mrtf -	chr3L_22_2750001	chr3L_2750001	RG4N_1-HE
2075	chr3L	2927780	2927867	chr3L	2936127	2936127	Tirant	41	8343	13.0	12.0	12.5	3.0	8347	chr3L	2927780	intron	Shab +	chr3L	2931954	intron	Shab +	chr3L	2936127	intron	Shab +	chr3L_41_2930001	chr3L_2930001	RG4N_1-HE
2076	chr3L	2966662	2966723	chr3L	2974160	2974224	mdg1	5	7500	4.5	3.0	3.8	1.0	7562	chr3L	2966662	intergenic	not near genes	chr3L	2970443	intergenic	not near genes	chr3L	2974224	intergenic	not near genes	chr3L_5_2970001	chr3L_2970001	RG4N_1-HE
2083	chr3L	3040272	3040356	chr3L	3042132	3042220	S-element	4	1862	3.0	0.0	1.5	1.6	1948	chr3L	3040272	3` UTR	CG2162 +	chr3L	3041246	intergenic	not near genes	chr3L	3042220	intergenic	Jafrac2 +	chr3L_4_3040001	chr3L_3040001	RG4N_1-HE
2084	chr3L	3051690	3051736	chr3L	3052003	3052051	pogo	4	315	9.0	5.5	7.2	0.5	361	chr3L	3051690	3` UTR	CG32485 +	chr3L	3051870	intergenic	CG32485 +	chr3L	3052051	intergenic	CG32485 +,CG1271 +	chr3L_4_3050001	chr3L_3050001	RG4N_1-HE
2085	chr3L	3061239	3061266	chr3L	3069868	3069882	Tirant	11	8625	25.0	6.0	15.5	0.7	8643	chr3L	3061239	intron	CG32486 -	chr3L	3065560	intron	CG32486 -	chr3L	3069882	intron	CG32486 -	chr3L_11_3065001	chr3L_3065001	RG4N_1-HE
2086	chr3L	3061268	3061315	chr3L	3069866	3069911	Tirant	24	8626	16.0	5.5	10.8	2.0	8643	chr3L	3061268	intron	CG32486 -	chr3L	3065590	intron	CG32486 -	chr3L	3069911	intron	CG32486 -	chr3L_24_3065001	chr3L_3065001	RG4N_1-HE
2096	chr3L	3281385	3281467	chr3L	3281946	3282008	Doc	51	550	13.0	12.0	12.5	3.8	623	chr3L	3281385	intron	CG12017 +	chr3L	3281696	intron	CG12017 +	chr3L	3282008	intron	CG12017 +	chr3L_51_3280001	chr3L_3280001	RG4N_1-HE
2104	chr3L	3475020	3475044	chr3L	3475531	3475559	jockey	8	510	41.5	14.5	28.0	0.3	539	chr3L	3475020	intron	CG42324 +	chr3L	3475290	intron	CG42324 +	chr3L	3475559	intron	CG42324 +	chr3L_8_3475001	chr3L_3475001	RG4N_1-HE
2105	chr3L	3475058	3475110	chr3L	3475529	3475564	jockey	4	475	14.5	13.5	14.0	0.3	506	chr3L	3475058	intron	CG42324 +	chr3L	3475311	intron	CG42324 +	chr3L	3475564	intron	CG42324 +	chr3L_4_3475001	chr3L_3475001	RG4N_1-HE
2111	chr3L	3601243	3601326	chr3L	3606618	3606708	copia	14	5378	8.5	13.5	11.0	1.2	5465	chr3L	3601243	intron	Eip63E +	chr3L	3603976	intron	Eip63E +	chr3L	3606708	intron	Eip63E +	chr3L_14_3600001	chr3L_3600001	RG4N_1-HE
2125	chr3L	3833675	3833761	chr3L	3833987	3834073	pogo	32	311	8.5	9.5	9.0	3.2	398	chr3L	3833675	intron	enc +	chr3L	3833874	intron	enc +	chr3L	3834073	intron	enc +	chr3L_32_3830001	chr3L_3830001	RG4N_1-HE
2143	chr3L	4328681	4328757	chr3L	4336249	4336298	412	20	7566	3.0	9.5	6.2	2.8	7617	chr3L	4328681	intron	Cip4 -	chr3L	4332490	intron	Cip4 -	chr3L	4336298	exon	Cip4 -	chr3L_20_4330001	chr3L_4330001	RG4N_1-HE
2166	chr3L	4901074	4901157	chr3L	4907335	4907410	diver	20	6260	1.5	7.0	4.2	3.8	6336	chr3L	4901074	intergenic	CG13704 +	chr3L	4904242	intergenic	not near genes	chr3L	4907410	intergenic	not near genes	chr3L_20_4900001	chr3L_4900001	RG4N_1-HE
2176	chr3L	5034092	5034192	chr3L	5043310	5043427	roo	15	9227	6.5	0.0	3.2	3.6	9335	chr3L	5034092	intron	Con -	chr3L	5038760	intron	Con -	chr3L	5043427	intron	Con -	chr3L_15_5035001	chr3L_5035001	RG4N_1-HE
2178	chr3L	5045395	5045476	chr3L	5050246	5050328	Doc	36	4850	13.5	9.5	11.5	2.9	4933	chr3L	5045395	5` UTR	Con -	chr3L	5047862	intron	Con -	chr3L	5050328	intron	Con -	chr3L_36_5045001	chr3L_5045001	RG4N_1-HE
2222	chr3L	5909974	5910057	chr3L	5910286	5910308	pogo	17	305	6.0	8.5	7.2	2.1	334	chr3L	5909974	intron	CG13288 +	chr3L	5910141	intron	CG13288 +	chr3L	5910308	intron	CG13288 +	chr3L_17_5910001	chr3L_5910001	RG4N_1-HE
2224	chr3L	5926292	5926338	chr3L	5926510	5926598	BS	11	251	3.5	10.0	6.8	1.4	306	chr3L	5926292	intron	Vap-33B +	chr3L	5926445	intron	Vap-33B +	chr3L	5926598	intron	Vap-33B +	chr3L_11_5925001	chr3L_5925001	RG4N_1-HE
2227	chr3L	6001638	6001693	chr3L	6004391	6004464	jockey	14	2765	11.0	4.0	7.5	1.6	2826	chr3L	6001638	intron	PVRAP +	chr3L	6003051	intron	PVRAP +	chr3L	6004464	intron	PVRAP +	chr3L_14_6000001	chr3L_6000001	RG4N_1-HE
2228	chr3L	6040294	6040387	chr3L	6042721	6042814	Doc	28	2426	10.0	10.5	10.2	2.5	2520	chr3L	6040294	intergenic	Jon65Aiv +	chr3L	6041554	intergenic	not near genes	chr3L	6042814	intergenic	not near genes	chr3L_28_6040001	chr3L_6040001	RG4N_1-HE
2235	chr3L	6220853	6220932	chr3L	6230077	6230155	roo	15	9218	4.5	4.5	4.5	2.7	9302	chr3L	6220853	5` UTR	pncr008:3L +	chr3L	6225504	intergenic	not near genes	chr3L	6230155	intergenic	not near genes	chr3L_15_6225001	chr3L_6225001	RG4N_1-HE
2241	chr3L	6334957	6335037	chr3L	6335499	6335528	297	23	534	12.0	21.0	16.5	1.3	571	chr3L	6334957	intron	CG13300 -	chr3L	6335242	intron	CG13300 -	chr3L	6335528	intron	CG13300 -	chr3L_23_6335001	chr3L_6335001	RG4N_1-HE
2246	chr3L	6405605	6405673	chr3L	6432140	6432208	roo	28	26533	11.0	14.0	12.5	2.1	26603	chr3L	6405605	intron	CG42747 +	chr3L	6418906	intron	CG42747 +	chr3L	6432208	intron	CG42747 +	chr3L_28_6415001	chr3L_6415001	RG4N_1-HE
2256	chr3L	6620544	6620598	chr3L	6621055	6621078	Rt1c	38	505	11.0	28.0	19.5	1.9	534	chr3L	6620544	intergenic	not near genes	chr3L	6620811	intergenic	not near genes	chr3L	6621078	intergenic	not near genes	chr3L_38_6620001	chr3L_6620001	RG4N_1-HE
2263	chr3L	6781086	6781134	chr3L	6783181	6783229	Doc	26	2094	12.0	11.5	11.8	2.0	2143	chr3L	6781086	intergenic	not near genes	chr3L	6782158	intergenic	not near genes	chr3L	6783229	intergenic	not near genes	chr3L_26_6780001	chr3L_6780001	RG4N_1-HE
2265	chr3L	6855884	6855892	chr3L	6860730	6860745	Doc	4	4852	2.5	13.0	7.8	0.5	4861	chr3L	6855884	intergenic	not near genes	chr3L	6858314	intergenic	not near genes	chr3L	6860745	intergenic	not near genes	chr3L_4_6855001	chr3L_6855001	RG4N_1-HE
2266	chr3L	6855895	6855933	chr3L	6860716	6860788	Doc	11	4841	1.0	11.0	6.0	1.6	4893	chr3L	6855895	intergenic	not near genes	chr3L	6858342	intergenic	not near genes	chr3L	6860788	intergenic	not near genes	chr3L_11_6855001	chr3L_6855001	RG4N_1-HE
2271	chr3L	6887457	6887496	chr3L	6895020	6895059	roo	16	7562	20.5	0.0	10.2	1.4	7602	chr3L	6887457	intergenic	not near genes	chr3L	6891258	intergenic	not near genes	chr3L	6895059	intergenic	not near genes	chr3L_16_6890001	chr3L_6890001	RG4N_1-HE
2281	chr3L	7129901	7129974	chr3L	7130164	7130236	BS	13	263	0.5	2.5	1.5	5.2	335	chr3L	7129901	intergenic	CG15829 +	chr3L	7130068	intergenic	CG15829 +	chr3L	7130236	intergenic	not near genes	chr3L_13_7130001	chr3L_7130001	RG4N_1-HE
2292	chr3L	7377263	7377325	chr3L	7380439	7380500	297	8	3171	1.5	3.0	2.2	2.5	3237	chr3L	7377263	intron	SMSr -	chr3L	7378882	intron	SMSr -	chr3L	7380500	intron	SMSr -	chr3L_8_7375001	chr3L_7375001	RG4N_1-HE
2299	chr3L	7498695	7498727	chr3L	7503543	7503576	F-element	17	4848	14.0	6.5	10.2	1.5	4881	chr3L	7498695	5` UTR	CG8539 -	chr3L	7501136	intergenic	not near genes	chr3L	7503576	intergenic	not near genes	chr3L_17_7500001	chr3L_7500001	RG4N_1-HE
2300	chr3L	7498729	7498774	chr3L	7503541	7503623	F-element	7	4839	10.0	6.5	8.2	0.8	4894	chr3L	7498729	5` UTR	CG8539 -	chr3L	7501176	intergenic	not near genes	chr3L	7503623	intergenic	not near genes	chr3L_7_7500001	chr3L_7500001	RG4N_1-HE
2309	chr3L	7793650	7793732	chr3L	7800772	7800855	297	50	7122	18.0	16.5	17.2	2.7	7205	chr3L	7793650	intron	CG32369 -	chr3L	7797252	intron	CG32369 -	chr3L	7800855	intron	CG32369 -	chr3L_50_7795001	chr3L_7795001	RG4N_1-HE
2314	chr3L	7886467	7886537	chr3L	7889039	7889110	Stalker4	18	2583	8.0	6.5	7.2	2.2	2643	chr3L	7886467	intron	CG32365 +	chr3L	7887788	intron	CG32365 +	chr3L	7889110	intron	CG32365 +	chr3L_18_7885001	chr3L_7885001	RG4N_1-HE
2315	chr3L	7916772	7916843	chr3L	7926013	7926085	roo	23	9241	12.0	9.0	10.5	2.0	9313	chr3L	7916772	3` UTR	syd -	chr3L	7921428	intron	syd -	chr3L	7926085	3` UTR	syd -	chr3L_23_7920001	chr3L_7920001	RG4N_1-HE
2317	chr3L	7985315	7985374	chr3L	7987711	7987774	NOF	18	2395	12.0	8.5	10.2	1.6	2459	chr3L	7985315	intron	nmo +	chr3L	7986544	intron	nmo +	chr3L	7987774	intron	nmo +	chr3L_18_7985001	chr3L_7985001	RG4N_1-HE
2320	chr3L	8019639	8019716	chr3L	8024122	8024198	NOF	13	4475	8.0	7.5	7.8	1.5	4559	chr3L	8019639	intron	nmo +	chr3L	8021918	intron	nmo +	chr3L	8024198	intron	nmo +	chr3L_13_8020001	chr3L_8020001	RG4N_1-HE
2321	chr3L	8019724	8019731	chr3L	8024114	8024139	NOF	4	4402	6.0	7.0	6.5	0.5	4415	chr3L	8019724	intron	nmo +	chr3L	8021932	intron	nmo +	chr3L	8024139	intron	nmo +	chr3L_4_8020001	chr3L_8020001	RG4N_1-HE
2328	chr3L	8233521	8233577	chr3L	8238854	8238903	Rt1a	14	5328	2.0	11.0	6.5	1.9	5382	chr3L	8233521	intron	CG7213 -	chr3L	8236212	intron	CG7213 -	chr3L	8238903	intron,intron	CG7213 -,Dscam4 +	chr3L_14_8235001	chr3L_8235001	RG4N_1-HE
2340	chr3L	8481754	8481802	chr3L	8490957	8491024	roo	11	9220	6.0	3.0	4.5	2.0	9270	chr3L	8481754	intron	CG43163 -	chr3L	8486389	intron	CG43163 -	chr3L	8491024	intron	CG43163 -	chr3L_11_8485001	chr3L_8485001	RG4N_1-HE
2341	chr3L	8498248	8498302	chr3L	8505778	8505840	blood	10	7537	3.0	3.5	3.2	2.4	7592	chr3L	8498248	intron	CG43163 -	chr3L	8502044	intron	CG43163 -	chr3L	8505840	intron	CG43163 -	chr3L_10_8500001	chr3L_8500001	RG4N_1-HE
2348	chr3L	8791221	8791264	chr3L	8796712	8796752	I-element	5	5490	11.0	7.5	9.2	0.5	5531	chr3L	8791221	exon	Fhos +	chr3L	8793986	intron	Fhos +	chr3L	8796752	intron	Fhos +	chr3L_5_8790001	chr3L_8790001	RG4N_1-HE
2349	chr3L	8791273	8791299	chr3L	8796702	8796789	I-element	9	5483	7.5	6.0	6.8	1.2	5516	chr3L	8791273	exon	Fhos +	chr3L	8794031	intron	Fhos +	chr3L	8796789	intron	Fhos +	chr3L_9_8790001	chr3L_8790001	RG4N_1-HE
2374	chr3L	9076870	9076879	chr3L	9084499	9084510	412	5	7630	26.5	9.0	17.8	0.3	7640	chr3L	9076870	exon	Tequila +	chr3L	9080690	intron	Tequila +	chr3L	9084510	exon	Tequila +	chr3L_5_9080001	chr3L_9080001	RG4N_1-HE
2375	chr3L	9076887	9076950	chr3L	9084491	9084545	412	21	7623	6.5	8.0	7.2	2.6	7658	chr3L	9076887	exon	Tequila +	chr3L	9080716	intron	Tequila +	chr3L	9084545	exon	Tequila +	chr3L_21_9080001	chr3L_9080001	RG4N_1-HE
2378	chr3L	9130504	9130516	chr3L	9134325	9134348	412	7	3829	16.0	8.0	12.0	0.5	3844	chr3L	9130504	intergenic	bol -	chr3L	9132426	intergenic	not near genes	chr3L	9134348	intergenic	Dhpr +	chr3L_7_9130001	chr3L_9130001	RG4N_1-HE
2379	chr3L	9130522	9130578	chr3L	9134320	9134410	412	9	3818	9.5	7.5	8.5	0.9	3888	chr3L	9130522	intergenic	bol -	chr3L	9132466	intergenic	not near genes	chr3L	9134410	intergenic	Dhpr +	chr3L_9_9130001	chr3L_9130001	RG4N_1-HE
2380	chr3L	9164641	9164654	chr3L	9166179	9166192	hobo	6	1538	21.5	0.0	10.8	0.5	1551	chr3L	9164641	intron	Rdl -	chr3L	9165416	intron	Rdl -	chr3L	9166192	intron	Rdl -	chr3L_6_9165001	chr3L_9165001	RG4N_1-HE
2381	chr3L	9164656	9164667	chr3L	9166178	9166199	hobo	5	1532	19.0	0.0	9.5	0.5	1543	chr3L	9164656	intron	Rdl -	chr3L	9165428	intron	Rdl -	chr3L	9166199	intron	Rdl -	chr3L_5_9165001	chr3L_9165001	RG4N_1-HE
2382	chr3L	9219194	9219219	chr3L	9219936	9219962	jockey	14	741	29.0	15.5	22.2	0.6	768	chr3L	9219194	intergenic	not near genes	chr3L	9219578	intergenic	not near genes	chr3L	9219962	intergenic	not near genes	chr3L_14_9215001	chr3L_9215001	RG4N_1-HE
2383	chr3L	9219220	9219268	chr3L	9219926	9219970	jockey	20	720	18.0	15.0	16.5	1.1	750	chr3L	9219220	intergenic	not near genes	chr3L	9219595	intergenic	not near genes	chr3L	9219970	intergenic	not near genes	chr3L_20_9215001	chr3L_9215001	RG4N_1-HE
2384	chr3L	9270549	9270646	chr3L	9278373	9278412	roo	20	7812	6.5	5.5	6.0	2.9	7863	chr3L	9270549	intron	GluRIB +	chr3L	9274480	intron	GluRIB +	chr3L	9278412	exon	GluRIB +	chr3L_20_9270001	chr3L_9270001	RG4N_1-HE
2394	chr3L	9392436	9392495	chr3L	9395297	9395378	Doc	9	2886	9.5	11.5	10.5	0.8	2942	chr3L	9392436	intron	CG4080 -	chr3L	9393907	intron	CG4080 -	chr3L	9395378	intron	CG4080 -	chr3L_9_9390001	chr3L_9390001	RG4N_1-HE
2397	chr3L	9443440	9443532	chr3L	9445304	9445394	S-element	13	1860	4.0	5.0	4.5	2.4	1954	chr3L	9443440	intron	CG33926 +	chr3L	9444417	intron	CG33926 +	chr3L	9445394	intron	CG33926 +	chr3L_13_9440001	chr3L_9440001	RG4N_1-HE
2398	chr3L	9501654	9501727	chr3L	9502208	9502259	roo	8	537	6.0	1.0	3.5	1.8	605	chr3L	9501654	intron	path -	chr3L	9501956	intron	path -	chr3L	9502259	intron	path -	chr3L_8_9500001	chr3L_9500001	RG4N_1-HE
2402	chr3L	9533697	9533761	chr3L	9541328	9541371	412	19	7617	13.5	19.0	16.2	1.1	7674	chr3L	9533697	intergenic	not near genes	chr3L	9537534	intergenic	not near genes	chr3L	9541371	intergenic	not near genes	chr3L_19_9535001	chr3L_9535001	RG4N_1-HE
2403	chr3L	9533765	9533780	chr3L	9541322	9541374	412	8	7596	8.5	16.5	12.5	0.6	7609	chr3L	9533765	intergenic	not near genes	chr3L	9537570	intergenic	not near genes	chr3L	9541374	intergenic	not near genes	chr3L_8_9535001	chr3L_9535001	RG4N_1-HE
2405	chr3L	9571859	9571882	chr3L	9572277	9572279	jockey	5	414	25.0	14.5	19.8	0.2	420	chr3L	9571859	intron	CG42673 +	chr3L	9572069	intron	CG42673 +	chr3L	9572279	intron	CG42673 +	chr3L_5_9570001	chr3L_9570001	RG4N_1-HE
2406	chr3L	9571883	9571928	chr3L	9572274	9572347	jockey	17	417	11.0	14.5	12.8	1.2	464	chr3L	9571883	intron	CG42673 +	chr3L	9572115	intron	CG42673 +	chr3L	9572347	intron	CG42673 +	chr3L_17_9570001	chr3L_9570001	RG4N_1-HE
2407	chr3L	9575859	9575884	chr3L	9580993	9581034	jockey	5	5145	39.5	13.5	26.5	0.2	5175	chr3L	9575859	intron	CG42673 +	chr3L	9578446	intron	CG42673 +	chr3L	9581034	intron	CG42673 +	chr3L_5_9575001	chr3L_9575001	RG4N_1-HE
2408	chr3L	9575888	9575932	chr3L	9580990	9581064	jockey	36	5141	23.0	12.5	17.8	1.9	5176	chr3L	9575888	intron	CG42673 +	chr3L	9578476	intron	CG42673 +	chr3L	9581064	intron	CG42673 +	chr3L_36_9575001	chr3L_9575001	RG4N_1-HE
2423	chr3L	9929611	9929700	chr3L	9938464	9938552	roo	20	8849	15.0	7.0	11.0	1.7	8941	chr3L	9929611	intron	CG34356 +	chr3L	9934082	intron	CG34356 +	chr3L	9938552	intron	CG34356 +	chr3L_20_9930001	chr3L_9930001	RG4N_1-HE
2434	chr3L	10060078	10060086	chr3L	10067706	10067736	17.6	4	7644	25.0	11.0	18.0	0.2	7658	chr3L	10060078	intron	dpr6 +	chr3L	10063907	intron	dpr6 +	chr3L	10067736	intron	dpr6 +	chr3L_4_10060001	chr3L_10060001	RG4N_1-HE
2435	chr3L	10060088	10060109	chr3L	10067703	10067759	17.6	14	7646	18.5	10.0	14.2	0.9	7671	chr3L	10060088	intron	dpr6 +	chr3L	10063924	intron	dpr6 +	chr3L	10067759	intron	dpr6 +	chr3L_14_10060001	chr3L_10060001	RG4N_1-HE
2449	chr3L	10414884	10414976	chr3L	10417324	10417333	Doc	34	2436	8.5	13.0	10.8	2.9	2449	chr3L	10414884	intergenic	CG12362 +	chr3L	10416108	intergenic	not near genes	chr3L	10417333	intergenic	not near genes	chr3L_34_10415001	chr3L_10415001	RG4N_1-HE
2491	chr3L	11087001	11087036	chr3L	11088861	11088895	S-element	9	1857	7.5	5.0	6.2	1.2	1894	chr3L	11087001	intron	JIL-1 -	chr3L	11087948	intron	JIL-1 -	chr3L	11088895	intron	JIL-1 -	chr3L_9_11085001	chr3L_11085001	RG4N_1-HE
2492	chr3L	11087037	11087087	chr3L	11088860	11088920	S-element	12	1844	5.0	5.0	5.0	2.0	1883	chr3L	11087037	intron	JIL-1 -	chr3L	11087978	intron	JIL-1 -	chr3L	11088920	intron	JIL-1 -	chr3L_12_11085001	chr3L_11085001	RG4N_1-HE
2494	chr3L	11105233	11105309	chr3L	11107014	11107072	X-element	11	1778	5.0	8.0	6.5	1.5	1839	chr3L	11105233	intergenic	not near genes	chr3L	11106152	intergenic	not near genes	chr3L	11107072	exon	CG32073 -	chr3L_11_11105001	chr3L_11105001	RG4N_1-HE
2503	chr3L	11264429	11264485	chr3L	11271447	11271507	17.6	11	7021	4.5	5.5	5.0	1.8	7078	chr3L	11264429	intergenic	not near genes	chr3L	11267968	intergenic	not near genes	chr3L	11271507	intergenic	not near genes	chr3L_11_11265001	chr3L_11265001	RG4N_1-HE
2504	chr3L	11277393	11277412	chr3L	11278465	11278484	Rt1a	4	1069	5.5	4.5	5.0	0.7	1091	chr3L	11277393	intergenic	not near genes	chr3L	11277938	intergenic	not near genes	chr3L	11278484	intergenic	not near genes	chr3L_4_11275001	chr3L_11275001	RG4N_1-HE
2505	chr3L	11277418	11277465	chr3L	11278463	11278520	Rt1a	6	1051	1.5	4.5	3.0	1.5	1102	chr3L	11277418	intergenic	not near genes	chr3L	11277969	intergenic	not near genes	chr3L	11278520	intergenic	not near genes	chr3L_6_11275001	chr3L_11275001	RG4N_1-HE
2510	chr3L	11329654	11329723	chr3L	11332909	11332948	jockey	24	3260	3.5	9.0	6.2	3.3	3294	chr3L	11329654	intergenic	not near genes	chr3L	11331301	intergenic	not near genes	chr3L	11332948	intergenic	not near genes	chr3L_24_11330001	chr3L_11330001	RG4N_1-HE
2522	chr3L	11564722	11564804	chr3L	11572411	11572451	412	5	7661	3.0	9.5	6.2	0.7	7729	chr3L	11564722	5` UTR	CG33267 +	chr3L	11568586	intron	CG33267 +	chr3L	11572451	exon	CG33267 +	chr3L_5_11565001	chr3L_11565001	RG4N_1-HE
2531	chr3L	11723032	11723104	chr3L	11727898	11727970	Doc	28	4866	9.5	7.5	8.5	2.9	4938	chr3L	11723032	3` UTR	Bmcp +	chr3L	11725501	intron	Bmcp +	chr3L	11727970	3` UTR	Bmcp +	chr3L_28_11725001	chr3L_11725001	RG4N_1-HE
2537	chr3L	11864497	11864509	chr3L	11865863	11865873	pogo	6	1365	26.0	14.5	20.2	0.3	1376	chr3L	11864497	intron	CG44837 -	chr3L	11865185	intron	CG44837 -	chr3L	11865873	intron	CG44837 -	chr3L_6_11865001	chr3L_11865001	RG4N_1-HE
2538	chr3L	11864511	11864578	chr3L	11865857	11865944	pogo	33	1362	11.0	13.0	12.0	2.5	1433	chr3L	11864511	intron	CG44837 -	chr3L	11865228	intron	CG44837 -	chr3L	11865944	intron	CG44837 -	chr3L_33_11865001	chr3L_11865001	RG4N_1-HE
2585	chr3L	12874874	12874949	chr3L	12877237	12877311	jockey	25	2360	8.0	14.5	11.2	2.0	2437	chr3L	12874874	intergenic	not near genes	chr3L	12876092	intergenic	not near genes	chr3L	12877311	intergenic	not near genes	chr3L_25_12875001	chr3L_12875001	RG4N_1-HE
2588	chr3L	12919226	12919260	chr3L	12924759	12924773	Rt1c	14	5533	25.0	12.0	18.5	0.7	5547	chr3L	12919226	intergenic	not near genes	chr3L	12922000	intergenic	not near genes	chr3L	12924773	intergenic	not near genes	chr3L_14_12920001	chr3L_12920001	RG4N_1-HE
2589	chr3L	12919263	12919302	chr3L	12924751	12924851	Rt1c	19	5527	13.0	11.0	12.0	1.5	5588	chr3L	12919263	intergenic	not near genes	chr3L	12922057	intergenic	not near genes	chr3L	12924851	intergenic	not near genes	chr3L_19_12920001	chr3L_12920001	RG4N_1-HE
2591	chr3L	12957729	12957807	chr3L	12962282	12962356	copia	31	4549	7.5	9.5	8.5	3.3	4627	chr3L	12957729	intergenic	not near genes	chr3L	12960042	intergenic	not near genes	chr3L	12962356	intergenic	not near genes	chr3L_31_12960001	chr3L_12960001	RG4N_1-HE
2623	chr3L	13525114	13525178	chr3L	13532963	13533045	roo	25	7862	9.5	12.5	11.0	2.1	7931	chr3L	13525114	intergenic	not near genes	chr3L	13529080	intergenic	not near genes	chr3L	13533045	intergenic	not near genes	chr3L_25_13525001	chr3L_13525001	RG4N_1-HE
2624	chr3L	13574572	13574616	chr3L	13580153	13580167	Rt1c	8	5575	17.0	13.0	15.0	0.5	5595	chr3L	13574572	intron	bru-3 -	chr3L	13577370	intron	bru-3 -	chr3L	13580167	intron	bru-3 -	chr3L_8_13575001	chr3L_13575001	RG4N_1-HE
2634	chr3L	13804485	13804577	chr3L	13822842	13822880	roo	65	18353	15.0	24.5	19.8	3.1	18395	chr3L	13804485	intergenic	not near genes	chr3L	13813682	intergenic	not near genes	chr3L	13822880	intergenic	not near genes	chr3L_65_13810001	chr3L_13810001	RG4N_1-HE
2651	chr3L	14245523	14245588	chr3L	14245674	14245753	1360	29	158	10.5	11.0	10.8	2.5	230	chr3L	14245523	3` UTR	CR44561 -	chr3L	14245638	3` UTR	CR44561 -	chr3L	14245753	intergenic	CR44561 -,CR44560 +	chr3L_29_14245001	chr3L_14245001	RG4N_1-HE
2652	chr3L	14267318	14267335	chr3L	14271823	14271830	F-element	9	4508	29.5	18.5	24.0	0.4	4512	chr3L	14267318	intergenic	not near genes	chr3L	14269574	intergenic	not near genes	chr3L	14271830	intergenic	not near genes	chr3L_9_14265001	chr3L_14265001	RG4N_1-HE
2653	chr3L	14267336	14267381	chr3L	14271817	14271892	F-element	21	4504	18.5	16.0	17.2	1.2	4556	chr3L	14267336	intergenic	not near genes	chr3L	14269614	intergenic	not near genes	chr3L	14271892	intergenic	not near genes	chr3L_21_14265001	chr3L_14265001	RG4N_1-HE
2655	chr3L	14295927	14295936	chr3L	14296479	14296493	roo	11	555	63.0	24.0	43.5	0.2	566	chr3L	14295927	intron	fz +	chr3L	14296210	intron	fz +	chr3L	14296493	intron	fz +	chr3L_11_14295001	chr3L_14295001	RG4N_1-HE
2656	chr3L	14295947	14295969	chr3L	14296476	14296526	roo	18	548	50.0	23.5	36.8	0.5	579	chr3L	14295947	intron	fz +	chr3L	14296236	intron	fz +	chr3L	14296526	intron	fz +	chr3L_18_14295001	chr3L_14295001	RG4N_1-HE
2657	chr3L	14295971	14296008	chr3L	14296469	14296555	roo	33	544	25.0	19.0	22.0	1.4	584	chr3L	14295971	intron	fz +	chr3L	14296263	intron	fz +	chr3L	14296555	intron	fz +	chr3L_33_14295001	chr3L_14295001	RG4N_1-HE
2658	chr3L	14312000	14312020	chr3L	14316839	14316888	X-element	10	4861	11.0	6.0	8.5	1.1	4888	chr3L	14312000	exon	fz +	chr3L	14314444	intron	fz +	chr3L	14316888	intron	fz +	chr3L_10_14310001	chr3L_14310001	RG4N_1-HE
2659	chr3L	14312022	14312045	chr3L	14316834	14316840	X-element	10	4850	7.5	5.5	6.5	1.3	4818	chr3L	14312022	exon	fz +	chr3L	14314431	intron	fz +	chr3L	14316840	intron	fz +	chr3L_10_14310001	chr3L_14310001	RG4N_1-HE
2668	chr3L	14468381	14468469	chr3L	14473661	14473706	copia	50	5277	5.5	15.0	10.2	4.5	5325	chr3L	14468381	intron	bbg -	chr3L	14471044	intron	bbg -	chr3L	14473706	intron	bbg -	chr3L_50_14470001	chr3L_14470001	RG4N_1-HE
2672	chr3L	14524263	14524342	chr3L	14529095	14529172	F-element	19	4831	10.0	5.0	7.5	2.2	4909	chr3L	14524263	intron	bbg -	chr3L	14526718	intron	bbg -	chr3L	14529172	intron	bbg -	chr3L_19_14525001	chr3L_14525001	RG4N_1-HE
2684	chr3L	14721132	14721149	chr3L	14723045	14723063	Rt1c	5	1914	26.5	16.5	21.5	0.2	1931	chr3L	14721132	intron	ome +	chr3L	14722098	intron	ome +	chr3L	14723063	intron	ome +	chr3L_5_14720001	chr3L_14720001	RG4N_1-HE
2685	chr3L	14721153	14721158	chr3L	14723043	14723072	Rt1c	4	1902	25.0	16.5	20.8	0.2	1919	chr3L	14721153	intron	ome +	chr3L	14722112	intron	ome +	chr3L	14723072	intron	ome +	chr3L_4_14720001	chr3L_14720001	RG4N_1-HE
2686	chr3L	14721161	14721177	chr3L	14723034	14723083	Rt1c	10	1896	18.0	12.5	15.2	0.6	1922	chr3L	14721161	intron	ome +	chr3L	14722122	intron	ome +	chr3L	14723083	intron	ome +	chr3L_10_14720001	chr3L_14720001	RG4N_1-HE
2687	chr3L	14721178	14721199	chr3L	14723024	14723102	Rt1c	14	1899	10.0	8.5	9.2	1.4	1924	chr3L	14721178	intron	ome +	chr3L	14722140	intron	ome +	chr3L	14723102	intron	ome +	chr3L_14_14720001	chr3L_14720001	RG4N_1-HE
2688	chr3L	14725537	14725586	chr3L	14728601	14728652	Doc	18	3065	7.5	6.5	7.0	2.2	3115	chr3L	14725537	intron	ome +	chr3L	14727094	intron	ome +	chr3L	14728652	intron	ome +	chr3L_18_14725001	chr3L_14725001	RG4N_1-HE
2691	chr3L	14825093	14825145	chr3L	14832891	14832940	Stalker2	16	7797	7.5	19.5	13.5	1.1	7847	chr3L	14825093	intron	CG17839 +	chr3L	14829016	intron	CG17839 +	chr3L	14832940	intron	CG17839 +	chr3L_16_14825001	chr3L_14825001	RG4N_1-HE
2697	chr3L	14954307	14954321	chr3L	14956047	14956061	transib2	7	1740	28.0	11.0	19.5	0.3	1754	chr3L	14954307	intergenic	not near genes	chr3L	14955184	intergenic	not near genes	chr3L	14956061	intergenic	not near genes	chr3L_7_14955001	chr3L_14955001	RG4N_1-HE
2698	chr3L	14954324	14954391	chr3L	14956046	14956132	transib2	39	1738	11.5	11.0	11.2	3.2	1808	chr3L	14954324	intergenic	not near genes	chr3L	14955228	intergenic	not near genes	chr3L	14956132	intergenic	not near genes	chr3L_39_14955001	chr3L_14955001	RG4N_1-HE
2703	chr3L	15084996	15085069	chr3L	15086221	15086306	1360	24	1235	5.0	3.0	4.0	4.8	1310	chr3L	15084996	intron	cp309 -	chr3L	15085651	intron	cp309 -	chr3L	15086306	intron	cp309 -	chr3L_24_15085001	chr3L_15085001	RG4N_1-HE
2719	chr3L	15295699	15295785	chr3L	15298610	15298699	gypsy5	28	2914	12.5	11.5	12.0	2.2	3000	chr3L	15295699	intergenic	not near genes	chr3L	15297199	intergenic	not near genes	chr3L	15298699	intergenic	Best4 +	chr3L_28_15295001	chr3L_15295001	RG4N_1-HE
2721	chr3L	15423697	15423774	chr3L	15426612	15426689	opus	30	2915	14.0	3.0	8.5	3.2	2992	chr3L	15423697	intergenic	not near genes	chr3L	15425193	intergenic	not near genes	chr3L	15426689	intergenic	not near genes	chr3L_30_15425001	chr3L_15425001	RG4N_1-HE
2730	chr3L	15554863	15554944	chr3L	15556721	15556798	S-element	27	1858	8.0	8.5	8.2	2.9	1935	chr3L	15554863	intron	AGO2 +	chr3L	15555830	intron	AGO2 +	chr3L	15556798	intron	AGO2 +	chr3L_27_15555001	chr3L_15555001	RG4N_1-HE
2744	chr3L	15899212	15899249	chr3L	15899796	15899849	jockey	12	608	6.0	0.5	3.2	2.9	637	chr3L	15899212	intergenic	pHCl -	chr3L	15899530	intergenic	not near genes	chr3L	15899849	intergenic	sff -	chr3L_12_15895001	chr3L_15895001	RG4N_1-HE
2745	chr3L	15929136	15929144	chr3L	15938350	15938358	roo	7	9214	12.0	4.5	8.2	0.8	9222	chr3L	15929136	intron	Pka-C3 -	chr3L	15933747	intron	Pka-C3 -	chr3L	15938358	intron	Pka-C3 -	chr3L_7_15930001	chr3L_15930001	RG4N_1-HE
2746	chr3L	15929146	15929182	chr3L	15938347	15938396	roo	6	9212	7.0	4.5	5.8	0.9	9250	chr3L	15929146	intron	Pka-C3 -	chr3L	15933771	intron	Pka-C3 -	chr3L	15938396	intron	Pka-C3 -	chr3L_6_15930001	chr3L_15930001	RG4N_1-HE
2756	chr3L	16184046	16184127	chr3L	16188935	16189016	X-element	26	4888	6.0	11.5	8.8	2.7	4970	chr3L	16184046	intergenic	not near genes	chr3L	16186531	intergenic	not near genes	chr3L	16189016	intergenic	not near genes	chr3L_26_16185001	chr3L_16185001	RG4N_1-HE
2770	chr3L	16443784	16443856	chr3L	16446195	16446266	Doc	52	2408	25.5	26.5	26.0	1.9	2482	chr3L	16443784	intron,intron	CG33158 +,dsx-c73A -	chr3L	16445025	intron,intron	CG33158 +,dsx-c73A -	chr3L	16446266	intron,intron	CG33158 +,dsx-c73A -	chr3L_52_16445001	chr3L_16445001	RG4N_1-HE
2771	chr3L	16443857	16443871	chr3L	16446192	16446276	Doc	13	2396	20.5	26.5	23.5	0.5	2419	chr3L	16443857	intron,intron	CG33158 +,dsx-c73A -	chr3L	16445066	intron,intron	CG33158 +,dsx-c73A -	chr3L	16446276	intron,intron	CG33158 +,dsx-c73A -	chr3L_13_16445001	chr3L_16445001	RG4N_1-HE
2775	chr3L	16493919	16493924	chr3L	16494507	16494511	jockey	4	588	56.5	24.5	40.5	0.1	592	chr3L	16493919	intron,exon,intron	CG33158 +,CG42514 -,CG43373 -	chr3L	16494215	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L	16494511	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L_4_16490001	chr3L_16490001	RG4N_1-HE
2776	chr3L	16493925	16493941	chr3L	16494506	16494529	jockey	24	586	53.0	24.5	38.8	0.6	604	chr3L	16493925	intron,exon,intron	CG33158 +,CG42514 -,CG43373 -	chr3L	16494227	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L	16494529	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L_24_16490001	chr3L_16490001	RG4N_1-HE
2777	chr3L	16493942	16494003	chr3L	16494505	16494568	jockey	62	582	26.5	23.5	25.0	2.4	626	chr3L	16493942	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L	16494255	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L	16494568	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L_62_16490001	chr3L_16490001	RG4N_1-HE
2785	chr3L	16616462	16616533	chr3L	16621861	16621905	297	15	5393	6.0	7.0	6.5	2.0	5443	chr3L	16616462	3` UTR	Abl -	chr3L	16619184	3` UTR	Abl -	chr3L	16621905	3` UTR	Abl -	chr3L_15_16615001	chr3L_16615001	RG4N_1-HE
2787	chr3L	16683986	16684023	chr3L	16689288	16689325	copia	7	5302	7.5	15.0	11.2	0.6	5339	chr3L	16683986	intron,intron	Lasp -,CG43954 -	chr3L	16686656	intron,intron	Lasp -,CG43954 -	chr3L	16689325	intron,intron,5` UTR	Lasp -,CG43954 -,CR45179 +	chr3L_7_16685001	chr3L_16685001	RG4N_1-HE
2794	chr3L	16945681	16945718	chr3L	16954889	16954911	roo	16	9207	17.5	13.0	15.2	1.0	9230	chr3L	16945681	exon	Obp73a +	chr3L	16950296	intergenic	not near genes	chr3L	16954911	5` UTR	Nc73EF +	chr3L_16_16950001	chr3L_16950001	RG4N_1-HE
2795	chr3L	16945719	16945754	chr3L	16954887	16954972	roo	10	9211	9.0	12.5	10.8	0.8	9253	chr3L	16945719	exon	Obp73a +	chr3L	16950346	intergenic	not near genes	chr3L	16954972	5` UTR	Nc73EF +	chr3L_10_16950001	chr3L_16950001	RG4N_1-HE
2799	chr3L	17034876	17034950	chr3L	17035130	17035209	G2	8	257	7.5	5.5	6.5	1.1	333	chr3L	17034876	intergenic	not near genes	chr3L	17035042	intergenic	not near genes	chr3L	17035209	intergenic	beg +	chr3L_8_17035001	chr3L_17035001	RG4N_1-HE
2800	chr3L	17084944	17085020	chr3L	17094164	17094240	roo	33	9218	16.0	23.5	19.8	1.6	9296	chr3L	17084944	intron	Rbp6 -	chr3L	17089592	intron	Rbp6 -	chr3L	17094240	intron	Rbp6 -	chr3L_33_17085001	chr3L_17085001	RG4N_1-HE
2820	chr3L	17516926	17516937	chr3L	17524553	17524560	412	4	7626	6.5	6.5	6.5	0.5	7634	chr3L	17516926	intron	CG7564 +	chr3L	17520743	intron	CG7564 +	chr3L	17524560	3` UTR	CG7564 +	chr3L_4_17520001	chr3L_17520001	RG4N_1-HE
2821	chr3L	17516941	17517001	chr3L	17524548	17524609	412	12	7616	1.0	6.5	3.8	2.5	7668	chr3L	17516941	intron	CG7564 +	chr3L	17520775	intron	CG7564 +	chr3L	17524609	3` UTR	CG7564 +	chr3L_12_17520001	chr3L_17520001	RG4N_1-HE
2831	chr3L	17730793	17730869	chr3L	17738194	17738270	mdg1	21	7399	7.5	9.0	8.2	2.3	7477	chr3L	17730793	intron	Ccn +	chr3L	17734532	intron	Ccn +	chr3L	17738270	intron	Ccn +	chr3L_21_17730001	chr3L_17730001	RG4N_1-HE
2836	chr3L	17799755	17799829	chr3L	17801613	17801687	S-element	29	1857	7.5	8.0	7.8	3.3	1932	chr3L	17799755	intron	NUCB1 -	chr3L	17800721	intron	NUCB1 -	chr3L	17801687	intron	NUCB1 -	chr3L_29_17800001	chr3L_17800001	RG4N_1-HE
2838	chr3L	17860656	17860668	chr3L	17861343	17861355	invader4	5	686	9.5	17.5	13.5	0.3	699	chr3L	17860656	intergenic	CG34002 +	chr3L	17861006	intergenic	not near genes	chr3L	17861355	intergenic	not near genes	chr3L_5_17860001	chr3L_17860001	RG4N_1-HE
2850	chr3L	18047649	18047732	chr3L	18056777	18056859	roo	14	9127	3.0	3.0	3.0	3.5	9210	chr3L	18047649	intron	Eip75B -	chr3L	18052254	intron	Eip75B -	chr3L	18056859	intron	Eip75B -	chr3L_14_18050001	chr3L_18050001	RG4N_1-HE
2851	chr3L	18078177	18078276	chr3L	18937660	18937761	F-element	10	859487	7.0	67.5	37.2	0.3	859584	chr3L	18078177	intergenic	CR45392 +	chr3L	18507969	intergenic	not near genes	chr3L	18937761	intron	CG32204 -	chr3L_10_18505001	chr3L_18505001	RG4N_1-HE
2866	chr3L	18189526	18189547	chr3L	18190198	18190219	S-element	10	671	11.5	13.5	12.5	0.7	693	chr3L	18189526	intergenic	not near genes	chr3L	18189872	intergenic	not near genes	chr3L	18190219	intergenic	not near genes	chr3L_10_18185001	chr3L_18185001	RG4N_1-HE
2867	chr3L	18189548	18189584	chr3L	18190196	18190256	S-element	19	660	11.5	12.5	12.0	1.5	708	chr3L	18189548	intergenic	not near genes	chr3L	18189902	intergenic	not near genes	chr3L	18190256	intergenic	not near genes	chr3L_19_18185001	chr3L_18185001	RG4N_1-HE
2892	chr3L	18506078	18506150	chr3L	18509612	18509682	F-element	37	3531	16.5	19.5	18.0	1.9	3604	chr3L	18506078	intergenic	not near genes	chr3L	18507880	intergenic	not near genes	chr3L	18509682	intergenic	not near genes	chr3L_37_18505001	chr3L_18505001	RG4N_1-HE
2894	chr3L	18514847	18514918	chr3L	18520109	18520177	BS	31	5260	19.0	15.0	17.0	1.7	5330	chr3L	18514847	intergenic	not near genes	chr3L	18517512	intergenic	not near genes	chr3L	18520177	intergenic	not near genes	chr3L_31_18515001	chr3L_18515001	RG4N_1-HE
2895	chr3L	18528572	18528646	chr3L	18537804	18537878	roo	57	9231	14.5	16.5	15.5	3.5	9306	chr3L	18528572	intergenic	not near genes	chr3L	18533225	intergenic	not near genes	chr3L	18537878	intergenic	not near genes	chr3L_57_18530001	chr3L_18530001	RG4N_1-HE
2901	chr3L	18593889	18593973	chr3L	18595936	18596027	Doc	12	2051	9.5	3.0	6.2	1.7	2138	chr3L	18593889	intergenic	term -	chr3L	18594958	intergenic	not near genes	chr3L	18596027	intergenic	CR45389 +	chr3L_12_18590001	chr3L_18590001	RG4N_1-HE
2906	chr3L	18702460	18702532	chr3L	18703146	18703165	INE-1	16	679	6.5	8.0	7.2	2.0	705	chr3L	18702460	intergenic	not near genes	chr3L	18702812	intergenic	not near genes	chr3L	18703165	intergenic	not near genes	chr3L_16_18700001	chr3L_18700001	RG4N_1-HE
2907	chr3L	18710707	18710769	chr3L	18718730	18718789	Stalker2	25	8022	13.0	13.5	13.2	1.8	8082	chr3L	18710707	intergenic	not near genes	chr3L	18714748	intergenic	not near genes	chr3L	18718789	intergenic	not near genes	chr3L_25_18710001	chr3L_18710001	RG4N_1-HE
2914	chr3L	18772347	18772426	chr3L	18781099	18781161	roo	16	8750	7.5	5.5	6.5	2.1	8814	chr3L	18772347	intron	ftz-f1 -	chr3L	18776754	intron	ftz-f1 -	chr3L	18781161	intron	ftz-f1 -	chr3L_16_18775001	chr3L_18775001	RG4N_1-HE
2918	chr3L	18833721	18833797	chr3L	18834956	18835032	1360	39	1232	14.0	8.5	11.2	3.2	1311	chr3L	18833721	intron	Indy -	chr3L	18834376	intron	Indy -	chr3L	18835032	intron	Indy -	chr3L_39_18830001	chr3L_18830001	RG4N_1-HE
2925	chr3L	18078300	18078311	chr3L	18937859	18937870	F-element	9	859560	22.0	81.5	51.8	0.2	859570	chr3L	18078300	intergenic	CR45392 +	chr3L	18508085	intergenic	not near genes	chr3L	18937870	intron	CG32204 -	chr3L_9_18505001	chr3L_18505001	RG4N_1-HE
2926	chr3L	18078298	18078392	chr3L	18937871	18937951	F-element	34	859563	51.0	77.0	64.0	0.5	859653	chr3L	18078298	intergenic	CR45392 +	chr3L	18508124	intergenic	not near genes	chr3L	18937951	intron	CG32204 -	chr3L_34_18505001	chr3L_18505001	RG4N_1-HE
2931	chr3L	19008782	19008825	chr3L	19009188	19009237	jockey	13	403	20.5	21.0	20.8	0.6	455	chr3L	19008782	intron	nkd -	chr3L	19009010	intron	nkd -	chr3L	19009237	intron	nkd -	chr3L_13_19005001	chr3L_19005001	RG4N_1-HE
2932	chr3L	19008826	19008837	chr3L	19009182	19009248	jockey	12	396	16.5	18.0	17.2	0.7	422	chr3L	19008826	intron	nkd -	chr3L	19009037	intron	nkd -	chr3L	19009248	intron	nkd -	chr3L_12_19005001	chr3L_19005001	RG4N_1-HE
2933	chr3L	19008858	19008867	chr3L	19009176	19009275	jockey	4	369	12.0	14.5	13.2	0.3	417	chr3L	19008858	intron	nkd -	chr3L	19009066	intron	nkd -	chr3L	19009275	intron	nkd -	chr3L_4_19005001	chr3L_19005001	RG4N_1-HE
2941	chr3L	19115599	19115639	chr3L	19115841	19115850	BS	8	241	8.5	8.0	8.2	0.9	251	chr3L	19115599	intron	CG14082 -	chr3L	19115724	intron	CG14082 -	chr3L	19115850	intron	CG14082 -	chr3L_8_19115001	chr3L_19115001	RG4N_1-HE
2942	chr3L	19115643	19115669	chr3L	19115837	19115865	BS	5	205	5.5	7.5	6.5	0.7	222	chr3L	19115643	intron	CG14082 -	chr3L	19115754	intron	CG14082 -	chr3L	19115865	intron	CG14082 -	chr3L_5_19115001	chr3L_19115001	RG4N_1-HE
2943	chr3L	19116990	19117004	chr3L	19124507	19124522	mdg1	5	7518	14.0	10.5	12.2	0.4	7532	chr3L	19116990	intron	CG14082 -	chr3L	19120756	intron	CG14082 -	chr3L	19124522	intron	CG14082 -	chr3L_5_19120001	chr3L_19120001	RG4N_1-HE
2944	chr3L	19117009	19117065	chr3L	19124494	19124557	mdg1	17	7505	6.0	7.5	6.8	2.2	7548	chr3L	19117009	intron	CG14082 -	chr3L	19120783	intron	CG14082 -	chr3L	19124557	intron	CG14082 -	chr3L_17_19120001	chr3L_19120001	RG4N_1-HE
2950	chr3L	19208002	19208081	chr3L	19209441	19209515	Doc	63	1439	21.0	10.0	15.5	3.8	1513	chr3L	19208002	intron	fz2 -	chr3L	19208758	intron	fz2 -	chr3L	19209515	intron	fz2 -	chr3L_63_19205001	chr3L_19205001	RG4N_1-HE
2958	chr3L	19398870	19398887	chr3L	19403658	19403675	F-element	10	4786	32.5	14.5	23.5	0.4	4805	chr3L	19398870	intron	CG32206 -	chr3L	19401272	intron	CG32206 -	chr3L	19403675	intron	CG32206 -	chr3L_10_19400001	chr3L_19400001	RG4N_1-HE
2959	chr3L	19398889	19398932	chr3L	19403655	19403720	F-element	28	4778	15.5	13.5	14.5	1.8	4831	chr3L	19398889	intron	CG32206 -	chr3L	19401304	intron	CG32206 -	chr3L	19403720	intron	CG32206 -	chr3L_28_19400001	chr3L_19400001	RG4N_1-HE
2969	chr3L	19820234	19820319	chr3L	19827854	19827939	412	30	7619	7.0	7.0	7.0	3.8	7705	chr3L	19820234	intron	Deaf1 +	chr3L	19824086	intron	Deaf1 +	chr3L	19827939	intron	Deaf1 +	chr3L_30_19820001	chr3L_19820001	RG4N_1-HE
2970	chr3L	19848453	19848512	chr3L	19857713	19857773	roo	9	9260	3.5	4.0	3.8	1.9	9320	chr3L	19848453	intron	Papss +	chr3L	19853113	intron	Papss +	chr3L	19857773	intron	Papss +	chr3L_9_19850001	chr3L_19850001	RG4N_1-HE
2971	chr3L	19861779	19861848	chr3L	19863611	19863679	S-element	10	1846	2.0	1.0	1.5	4.0	1900	chr3L	19861779	5` UTR	CR45433 +	chr3L	19862729	intergenic	not near genes	chr3L	19863679	intergenic	not near genes	chr3L_10_19860001	chr3L_19860001	RG4N_1-HE
2978	chr3L	20113601	20113670	chr3L	20122929	20122994	roo	18	9328	4.5	3.0	3.8	3.8	9393	chr3L	20113601	intergenic	not near genes	chr3L	20118298	intergenic	not near genes	chr3L	20122994	intergenic	not near genes	chr3L_18_20115001	chr3L_20115001	RG4N_1-HE
2982	chr3L	20212542	20212578	chr3L	20218190	20218226	mdg3	12	5648	7.0	6.5	6.8	1.5	5684	chr3L	20212542	intergenic	CG7017 -	chr3L	20215384	intergenic	not near genes	chr3L	20218226	intergenic	CG6933 -	chr3L_12_20215001	chr3L_20215001	RG4N_1-HE
2984	chr3L	20257271	20257355	chr3L	20258462	20258513	pogo	29	1187	6.0	9.0	7.5	3.4	1242	chr3L	20257271	intron	rdgC +	chr3L	20257892	intron	rdgC +	chr3L	20258513	intron	rdgC +	chr3L_29_20255001	chr3L_20255001	RG4N_1-HE
2987	chr3L	20476701	20476766	chr3L	20484371	20484436	springer	19	7669	6.5	7.0	6.8	2.4	7735	chr3L	20476701	3` UTR	isoQC +	chr3L	20480568	intergenic	not near genes	chr3L	20484436	3` UTR	ZnT77C -	chr3L_19_20480001	chr3L_20480001	RG4N_1-HE
2989	chr3L	20590005	20590019	chr3L	20590613	20590613	412	9	605	48.5	14.0	31.2	0.3	608	chr3L	20590005	intergenic	not near genes	chr3L	20590309	intergenic	not near genes	chr3L	20590613	intergenic	not near genes	chr3L_9_20590001	chr3L_20590001	RG4N_1-HE
2990	chr3L	20590022	20590085	chr3L	20590610	20590695	412	43	593	23.5	13.0	18.2	2.2	673	chr3L	20590022	intergenic	not near genes	chr3L	20590358	intergenic	not near genes	chr3L	20590695	intergenic	not near genes	chr3L_43_20590001	chr3L_20590001	RG4N_1-HE
2994	chr3L	20821241	20821310	chr3L	20824923	20824960	NOF	16	3678	2.5	4.5	3.5	3.6	3719	chr3L	20821241	intron	Pka-R1 +	chr3L	20823100	intron	Pka-R1 +	chr3L	20824960	intron	Pka-R1 +	chr3L_16_20820001	chr3L_20820001	RG4N_1-HE
3000	chr3L	21014855	21014866	chr3L	21023406	21023418	Tirant	4	8551	43.0	16.5	29.8	0.1	8563	chr3L	21014855	intron	skd -	chr3L	21019136	intron	skd -	chr3L	21023418	intron	skd -	chr3L_4_21015001	chr3L_21015001	RG4N_1-HE
3001	chr3L	21014873	21014887	chr3L	21023400	21023408	Tirant	5	8531	37.5	14.0	25.8	0.2	8535	chr3L	21014873	intron	skd -	chr3L	21019140	intron	skd -	chr3L	21023408	intron	skd -	chr3L_5_21015001	chr3L_21015001	RG4N_1-HE
3002	chr3L	21014889	21014944	chr3L	21023399	21023455	Tirant	23	8526	15.5	13.5	14.5	1.5	8566	chr3L	21014889	intron	skd -	chr3L	21019172	intron	skd -	chr3L	21023455	intron	skd -	chr3L_23_21015001	chr3L_21015001	RG4N_1-HE
3005	chr3L	21151804	21151830	chr3L	21156959	21156985	flea	9	5154	13.0	7.5	10.2	0.8	5181	chr3L	21151804	intron	Ac78C -	chr3L	21154394	intron	Ac78C -	chr3L	21156985	intron	Ac78C -	chr3L_9_21150001	chr3L_21150001	RG4N_1-HE
3006	chr3L	21151837	21151861	chr3L	21156956	21157016	flea	12	5151	8.0	7.5	7.8	1.4	5179	chr3L	21151837	intron	Ac78C -	chr3L	21154426	intron	Ac78C -	chr3L	21157016	intron	Ac78C -	chr3L_12_21150001	chr3L_21150001	RG4N_1-HE
3009	chr3L	21243706	21243764	chr3L	21251309	21251398	412	5	7604	3.5	6.5	5.0	0.8	7692	chr3L	21243706	intron	Eip78C +	chr3L	21247552	intron	Eip78C +	chr3L	21251398	intron	Eip78C +	chr3L_5_21245001	chr3L_21245001	RG4N_1-HE
3010	chr3L	21306098	21306163	chr3L	21315322	21315392	roo	18	9228	3.0	4.5	3.8	3.8	9294	chr3L	21306098	3` UTR	CG7632 +	chr3L	21310745	intron	Pc -	chr3L	21315392	3` UTR	Pc -	chr3L_18_21310001	chr3L_21310001	RG4N_1-HE
3012	chr3L	21361672	21361742	chr3L	21362697	21362767	G2	25	1022	7.5	6.5	7.0	3.1	1095	chr3L	21361672	intergenic	CG32440 +	chr3L	21362220	intergenic	not near genes	chr3L	21362767	intergenic	not near genes	chr3L_25_21360001	chr3L_21360001	RG4N_1-HE
3013	chr3L	21365832	21365834	chr3L	21371350	21371352	I-element	4	5518	9.0	25.5	17.2	0.2	5520	chr3L	21365832	intergenic	not near genes	chr3L	21368592	intergenic	not near genes	chr3L	21371352	intergenic	not near genes	chr3L_4_21365001	chr3L_21365001	RG4N_1-HE
3014	chr3L	21372670	21372724	chr3L	21379241	21379302	McClintock	16	6577	9.0	8.0	8.5	1.7	6632	chr3L	21372670	intergenic	not near genes	chr3L	21375986	intergenic	not near genes	chr3L	21379302	intergenic	not near genes	chr3L_16_21375001	chr3L_21375001	RG4N_1-HE
3015	chr3L	21372727	21372732	chr3L	21379232	21379311	McClintock	4	6560	9.0	6.5	7.8	0.5	6584	chr3L	21372727	intergenic	not near genes	chr3L	21376019	intergenic	not near genes	chr3L	21379311	intergenic	not near genes	chr3L_4_21375001	chr3L_21375001	RG4N_1-HE
3026	chr3L	21498791	21498850	chr3L	21500484	21500556	1360	8	1697	5.5	10.0	7.8	0.9	1765	chr3L	21498791	5` UTR,intron	CR43933 +,Glg1 -	chr3L	21499674	intron	Glg1 -	chr3L	21500556	intron	Glg1 -	chr3L_8_21495001	chr3L_21495001	RG4N_1-HE
3027	chr3L	21501128	21501156	chr3L	21501293	21501321	1360	7	162	3.0	9.0	6.0	1.0	193	chr3L	21501128	intron	Glg1 -	chr3L	21501224	intron	Glg1 -	chr3L	21501321	intron	Glg1 -	chr3L_7_21500001	chr3L_21500001	RG4N_1-HE
3030	chr3L	21659610	21659649	chr3L	21659761	21659801	INE-1	13	149	10.0	7.0	8.5	1.4	191	chr3L	21659610	intron	CG43980 +	chr3L	21659706	intron	CG43980 +	chr3L	21659801	intron	CG43980 +	chr3L_13_21655001	chr3L_21655001	RG4N_1-HE
3032	chr3L	21749293	21749327	chr3L	21754501	21754558	Doc	8	5224	5.5	8.5	7.0	1.0	5265	chr3L	21749293	intron	Syn1 -	chr3L	21751926	intron	Syn1 -	chr3L	21754558	intron	Syn1 -	chr3L_8_21750001	chr3L_21750001	RG4N_1-HE
3049	chr3L	22099617	22099694	chr3L	22105874	22105951	3S18	21	6256	13.5	12.0	12.8	1.5	6334	chr3L	22099617	intergenic	not near genes	chr3L	22102784	intergenic	not near genes	chr3L	22105951	intergenic	not near genes	chr3L_21_22100001	chr3L_22100001	RG4N_1-HE
3065	chr3L	22555723	22555785	chr3L	22563256	22563293	blood	14	7530	8.5	7.0	7.8	1.6	7570	chr3L	22555723	intergenic	not near genes	chr3L	22559508	intergenic	not near genes	chr3L	22563293	intergenic	not near genes	chr3L_14_22555001	chr3L_22555001	RG4N_1-HE
3066	chr3L	22577577	22577584	chr3L	22582436	22582438	Doc	4	4858	17.5	15.0	16.2	0.2	4861	chr3L	22577577	intergenic	not near genes	chr3L	22580008	intergenic	not near genes	chr3L	22582438	3` UTR	CG14459 -	chr3L_4_22580001	chr3L_22580001	RG4N_1-HE
3067	chr3L	22577595	22577603	chr3L	22582435	22582461	Doc	5	4851	14.0	15.0	14.5	0.3	4866	chr3L	22577595	intergenic	not near genes	chr3L	22580028	intergenic	not near genes	chr3L	22582461	3` UTR	CG14459 -	chr3L_5_22580001	chr3L_22580001	RG4N_1-HE
3068	chr3L	22577613	22577639	chr3L	22582410	22582466	Doc	5	4828	9.0	11.0	10.0	0.5	4853	chr3L	22577613	intergenic	not near genes	chr3L	22580040	intergenic	not near genes	chr3L	22582466	3` UTR	CG14459 -	chr3L_5_22580001	chr3L_22580001	RG4N_1-HE
3069	chr3L	22617131	22617205	chr3L	22624653	22624728	blood	22	7520	7.5	9.0	8.2	2.4	7597	chr3L	22617131	intron	CG14459 -	chr3L	22620930	intron	CG14459 -	chr3L	22624728	intron	CG14459 -	chr3L_22_22620001	chr3L_22620001	RG4N_1-HE
3072	chr3L	22761335	22761359	chr3L	22766840	22766864	Ivk	10	5505	19.5	10.5	15.0	0.6	5529	chr3L	22761335	intron	SPoCk +	chr3L	22764100	intron	SPoCk +	chr3L	22766864	intron	SPoCk +	chr3L_10_22760001	chr3L_22760001	RG4N_1-HE
3073	chr3L	22761363	22761400	chr3L	22766823	22766890	Ivk	19	5501	11.5	7.0	9.2	1.9	5527	chr3L	22761363	intron	SPoCk +	chr3L	22764126	intron	SPoCk +	chr3L	22766890	intron	SPoCk +	chr3L_19_22760001	chr3L_22760001	RG4N_1-HE
3075	chr3L	22865923	22865998	chr3L	22867127	22867203	Doc	11	1203	2.0	4.5	3.2	2.6	1280	chr3L	22865923	exon	CG33170 +	chr3L	22866563	intron	CG33170 +	chr3L	22867203	intron	CG33170 +	chr3L_11_22865001	chr3L_22865001	RG4N_1-HE
3082	chr3L	22989812	22989833	chr3L	22996857	22996878	297	7	7044	25.5	12.0	18.8	0.4	7066	chr3L	22989812	intergenic	not near genes	chr3L	22993345	intergenic	not near genes	chr3L	22996878	intergenic	not near genes	chr3L_7_22990001	chr3L_22990001	RG4N_1-HE
3083	chr3L	22989835	22989884	chr3L	22996853	22996930	297	18	7042	13.5	11.0	12.2	1.4	7095	chr3L	22989835	intergenic	not near genes	chr3L	22993382	intergenic	not near genes	chr3L	22996930	intergenic	not near genes	chr3L_18_22990001	chr3L_22990001	RG4N_1-HE
3096	chr3L	23491395	23491460	chr3L	23491597	23491663	INE-1	14	203	18.5	19.0	18.8	0.7	268	chr3L	23491395	intergenic	not near genes	chr3L	23491529	intergenic	not near genes	chr3L	23491663	intergenic	not near genes	chr3L_14_23490001	chr3L_23490001	RG4N_1-HE
3100	chr3L	23665480	23665528	chr3L	23665625	23665656	gypsy8	55	155	27.0	18.0	22.5	2.3	176	chr3L	23665480	intron	AGO3 +	chr3L	23665568	intron	AGO3 +	chr3L	23665656	intron	AGO3 +	chr3L_55_23665001	chr3L_23665001	RG4N_1-HE
3107	chr3L	24021217	24021302	chr3L	24022445	24022529	1360	15	1225	3.0	1.5	2.2	4.7	1312	chr3L	24021217	intergenic	not near genes	chr3L	24021873	intergenic	not near genes	chr3L	24022529	intergenic	not near genes	chr3L_15_24020001	chr3L_24020001	RG4N_1-HE
3109	chr3L	24168733	24168817	chr3L	24176120	24176173	ZAM	23	7363	13.0	13.0	13.0	1.6	7440	chr3L	24168733	intron	Snap25 +	chr3L	24172453	intron	Snap25 +	chr3L	24176173	intron	Snap25 +	chr3L_23_24170001	chr3L_24170001	RG4N_1-HE
3112	chr3L	24791837	24791861	chr3L	24796687	24796711	Doc	6	4850	11.0	7.0	9.0	0.6	4874	chr3L	24791837	intergenic	not near genes	chr3L	24794274	intergenic	not near genes	chr3L	24796711	intergenic	not near genes	chr3L_6_24790001	chr3L_24790001	RG4N_1-HE
3116	chr3L	25628451	25628517	chr3L	25633286	25633359	F-element	10	4837	7.0	8.0	7.5	1.2	4908	chr3L	25628451	intron	CG41343 -	chr3L	25630905	intron	CG41343 -	chr3L	25633359	intron	CG41343 -	chr3L_10_25630001	chr3L_25630001	RG4N_1-HE
3117	chr3L	25824626	25824677	chr3L	27273495	27273501	F-element	4	1448853	72.0	26.0	49.0	0.1	1448875	chr3L	25824626	intron	CG40178 -	chr3L	26549064	intergenic	not near genes	chr3L	27273501	intergenic	not near genes	chr3L_4_26545001	chr3L_26545001	RG4N_1-HE
3122	chr3L	27356059	27356100	chr3L	27357319	27357349	1360	13	1265	12.5	0.0	6.2	1.8	1290	chr3L	27356059	intron	Dbp80 +	chr3L	27356704	intron	Dbp80 +	chr3L	27357349	intron	Dbp80 +	chr3L_13_27355001	chr3L_27355001	RG4N_1-HE
3126	chr3L	27727624	27727670	chr3L	27728749	27728796	G-element	6	1146	17.5	3.0	10.2	0.5	1172	chr3L	27727624	intergenic	not near genes	chr3L	27728210	intergenic	not near genes	chr3L	27728796	intergenic	not near genes	chr3L_6_27725001	chr3L_27725001	RG4N_1-HE
3128	chr3L	27980628	27980724	chr3L	27985497	27985584	Doc	25	4867	5.0	2.0	3.5	5.6	4956	chr3L	27980628	intron	CG17514 -	chr3L	27983106	intron	CG17514 -	chr3L	27985584	intron	CG17514 -	chr3L_25_27980001	chr3L_27980001	RG4N_1-HE
3138	chr3R	3611020	3611041	chr3R	3617199	3617220	rooA	13	6180	30.0	123.0	76.5	0.2	6200	chr3R	3611020	intergenic	not near genes	chr3R	3614120	intergenic	not near genes	chr3R	3617220	intergenic	not near genes	chr3R_13_3610001	chr3R_3610001	RG4N_1-HE
3143	chr3R	4206007	4206094	chr3R	4211653	4211740	mdg3	18	5645	7.5	5.5	6.5	2.4	5733	chr3R	4206007	intron	CG14636 -	chr3R	4208874	intron	CG14636 -	chr3R	4211740	intron	CG14636 -	chr3R_18_4205001	chr3R_4205001	RG4N_1-HE
3145	chr3R	4366697	4366776	chr3R	4375151	4375230	roo	30	8452	9.5	7.5	8.5	3.2	8533	chr3R	4366697	3` UTR	CG1090 +	chr3R	4370964	intergenic	not near genes	chr3R	4375230	5` UTR	CR44922 +	chr3R_30_4370001	chr3R_4370001	RG4N_1-HE
3146	chr3R	4408362	4408416	chr3R	4412737	4412789	Juan	16	4374	6.5	7.0	6.8	2.1	4427	chr3R	4408362	intron	CG32944 -	chr3R	4410576	intron	CG32944 -	chr3R	4412789	intron	CG32944 -	chr3R_16_4410001	chr3R_4410001	RG4N_1-HE
3152	chr3R	4609492	4609501	chr3R	4610727	4610729	1360	8	1234	34.0	15.0	24.5	0.3	1237	chr3R	4609492	intergenic	not near genes	chr3R	4610110	intergenic	not near genes	chr3R	4610729	intergenic	not near genes	chr3R_8_4610001	chr3R_4610001	RG4N_1-HE
3153	chr3R	4609502	4609567	chr3R	4610722	4610789	1360	32	1231	15.0	14.0	14.5	2.1	1287	chr3R	4609502	intergenic	not near genes	chr3R	4610146	intergenic	not near genes	chr3R	4610789	intergenic	not near genes	chr3R_32_4610001	chr3R_4610001	RG4N_1-HE
3154	chr3R	4636533	4636611	chr3R	4637024	4637102	INE-1	27	490	9.0	5.0	7.0	3.4	569	chr3R	4636533	intergenic	not near genes	chr3R	4636818	intergenic	not near genes	chr3R	4637102	intergenic	not near genes	chr3R_27_4635001	chr3R_4635001	RG4N_1-HE
3155	chr3R	4683119	4683175	chr3R	4684949	4684994	S-element	44	1825	37.5	24.5	31.0	1.4	1875	chr3R	4683119	intron	CG43427 +	chr3R	4684056	intron	CG43427 +	chr3R	4684994	intron	CG43427 +	chr3R_44_4680001	chr3R_4680001	RG4N_1-HE
3156	chr3R	4683176	4683207	chr3R	4684945	4685012	S-element	21	1813	24.0	20.5	22.2	0.9	1836	chr3R	4683176	intron	CG43427 +	chr3R	4684094	intron	CG43427 +	chr3R	4685012	intron	CG43427 +	chr3R_21_4680001	chr3R_4680001	RG4N_1-HE
3159	chr3R	4753199	4753255	chr3R	4757552	4757629	F-element	30	4367	11.0	13.5	12.2	2.3	4430	chr3R	4753199	intron,intron	atms +,CG44098 -	chr3R	4755414	intron,intron	atms +,CG44098 -	chr3R	4757629	intron,exon	atms +,CG44098 -	chr3R_30_4755001	chr3R_4755001	RG4N_1-HE
3160	chr3R	4759658	4759736	chr3R	4761227	4761298	hopper2	18	1564	8.5	13.5	11.0	1.5	1640	chr3R	4759658	intron,intron	atms +,CG44098 -	chr3R	4760478	intron,intron	atms +,CG44098 -	chr3R	4761298	intron,intron	atms +,CG44098 -	chr3R_18_4760001	chr3R_4760001	RG4N_1-HE
3165	chr3R	4887424	4887438	chr3R	4894865	4894874	rover	6	7443	15.5	9.0	12.2	0.5	7450	chr3R	4887424	intergenic	not near genes	chr3R	4891149	intergenic	not near genes	chr3R	4894874	intergenic	not near genes	chr3R_6_4890001	chr3R_4890001	RG4N_1-HE
3166	chr3R	4887444	4887495	chr3R	4894864	4894891	rover	19	7431	9.0	9.0	9.0	1.9	7447	chr3R	4887444	intergenic	not near genes	chr3R	4891168	intergenic	not near genes	chr3R	4894891	intergenic	not near genes	chr3R_19_4890001	chr3R_4890001	RG4N_1-HE
3175	chr3R	5045784	5045871	chr3R	5052957	5053038	HMS-Beagle	20	7170	8.5	5.5	7.0	2.5	7254	chr3R	5045784	3` UTR	CR43635 -	chr3R	5049411	intergenic	not near genes	chr3R	5053038	intergenic	CR45588 -	chr3R_20_5045001	chr3R_5045001	RG4N_1-HE
3176	chr3R	5067942	5068009	chr3R	5073530	5073587	mdg3	15	5584	7.5	6.0	6.8	1.9	5645	chr3R	5067942	intergenic	not near genes	chr3R	5070764	intergenic	not near genes	chr3R	5073587	intergenic	not near genes	chr3R_15_5070001	chr3R_5070001	RG4N_1-HE
3189	chr3R	5338347	5338362	chr3R	5343588	5343610	Rt1c	7	5245	40.0	19.0	29.5	0.2	5263	chr3R	5338347	intron	mtd -	chr3R	5340978	intron	mtd -	chr3R	5343610	intron	mtd -	chr3R_7_5340001	chr3R_5340001	RG4N_1-HE
3190	chr3R	5338367	5338423	chr3R	5343580	5343613	Rt1c	33	5239	19.5	16.5	18.0	1.7	5246	chr3R	5338367	intron	mtd -	chr3R	5340990	intron	mtd -	chr3R	5343613	intron	mtd -	chr3R_33_5340001	chr3R_5340001	RG4N_1-HE
3193	chr3R	5445902	5445979	chr3R	5452433	5452510	Burdock	10	6528	3.5	5.0	4.2	1.9	6608	chr3R	5445902	intron	CG14669 +	chr3R	5449206	intron	CG14669 +	chr3R	5452510	intron	CG14669 +	chr3R_10_5445001	chr3R_5445001	RG4N_1-HE
3194	chr3R	5745959	5746033	chr3R	5746269	5746345	pogo	8	310	3.5	7.0	5.2	1.3	386	chr3R	5745959	3` UTR	Madm +	chr3R	5746152	3` UTR	Madm +	chr3R	5746345	3` UTR	Madm +	chr3R_8_5745001	chr3R_5745001	RG4N_1-HE
3195	chr3R	5809052	5809131	chr3R	5809364	5809442	pogo	23	309	6.5	7.0	6.8	2.9	390	chr3R	5809052	3` UTR	CG11000 +	chr3R	5809247	3` UTR	CG11000 +	chr3R	5809442	3` UTR	CG11000 +	chr3R_23_5805001	chr3R_5805001	RG4N_1-HE
3196	chr3R	5822329	5822399	chr3R	5823567	5823637	1360	18	1236	3.5	6.5	5.0	3.0	1308	chr3R	5822329	3` UTR	CG2023 -	chr3R	5822983	3` UTR	CG2023 -	chr3R	5823637	3` UTR	CG2023 -	chr3R_18_5820001	chr3R_5820001	RG4N_1-HE
3200	chr3R	5927518	5927575	chr3R	5927824	5927886	pogo	20	306	8.5	10.0	9.2	2.0	368	chr3R	5927518	intron	CG34113 -	chr3R	5927702	intron	CG34113 -	chr3R	5927886	intron	CG34113 -	chr3R_20_5925001	chr3R_5925001	RG4N_1-HE
3203	chr3R	6015936	6015991	chr3R	6024441	6024543	Tirant	14	8531	5.5	7.5	6.5	1.9	8607	chr3R	6015936	intergenic	not near genes	chr3R	6020240	intergenic	not near genes	chr3R	6024543	intergenic	not near genes	chr3R_14_6020001	chr3R_6020001	RG4N_1-HE
3205	chr3R	6158447	6158482	chr3R	6167101	6167129	Tirant	7	8650	21.5	10.5	16.0	0.4	8682	chr3R	6158447	intergenic	not near genes	chr3R	6162788	intergenic	not near genes	chr3R	6167129	intergenic	CG1077 +	chr3R_7_6160001	chr3R_6160001	RG4N_1-HE
3206	chr3R	6158484	6158508	chr3R	6167095	6167161	Tirant	4	8641	16.0	9.5	12.8	0.3	8677	chr3R	6158484	intergenic	not near genes	chr3R	6162822	intergenic	not near genes	chr3R	6167161	intergenic	CG1077 +	chr3R_4_6160001	chr3R_6160001	RG4N_1-HE
3207	chr3R	6158513	6158536	chr3R	6167094	6167139	Tirant	7	8626	9.5	9.5	9.5	0.7	8626	chr3R	6158513	intergenic	not near genes	chr3R	6162826	intergenic	not near genes	chr3R	6167139	intergenic	CG1077 +	chr3R_7_6160001	chr3R_6160001	RG4N_1-HE
3208	chr3R	6175120	6175184	chr3R	6182450	6182527	HMS-Beagle2	10	7342	3.5	4.0	3.8	2.1	7407	chr3R	6175120	intergenic	Osi1 +	chr3R	6178824	intron	CR45194 +	chr3R	6182527	intergenic	CR45194 +	chr3R_10_6175001	chr3R_6175001	RG4N_1-HE
3210	chr3R	6206240	6206302	chr3R	6206518	6206582	BS	14	280	8.0	8.0	8.0	1.6	342	chr3R	6206240	exon	Osi24 +	chr3R	6206411	intron	Osi24 +	chr3R	6206582	intron	Osi24 +	chr3R_14_6205001	chr3R_6205001	RG4N_1-HE
3220	chr3R	6509978	6510033	chr3R	6515130	6515184	jockey	13	5152	10.5	13.0	11.8	1.0	5206	chr3R	6509978	intergenic	not near genes	chr3R	6512581	intergenic	not near genes	chr3R	6515184	intergenic	not near genes	chr3R_13_6510001	chr3R_6510001	RG4N_1-HE
3231	chr3R	6737471	6737486	chr3R	6739299	6739344	Doc	7	1838	17.0	14.5	15.8	0.4	1873	chr3R	6737471	intron	pb -	chr3R	6738408	intron	pb -	chr3R	6739344	intron	pb -	chr3R_7_6735001	chr3R_6735001	RG4N_1-HE
3232	chr3R	6737487	6737524	chr3R	6739298	6739359	Doc	8	1842	8.0	14.5	11.2	0.7	1872	chr3R	6737487	intron	pb -	chr3R	6738423	intron	pb -	chr3R	6739359	intron	pb -	chr3R_8_6735001	chr3R_6735001	RG4N_1-HE
3259	chr3R	7558545	7558553	chr3R	7563279	7563287	Doc	6	4734	5.5	4.5	5.0	1.0	4742	chr3R	7558545	intergenic	not near genes	chr3R	7560916	intergenic	not near genes	chr3R	7563287	intergenic	not near genes	chr3R_6_7560001	chr3R_7560001	RG4N_1-HE
3263	chr3R	7694525	7694599	chr3R	7713656	7713731	invader3	22	19132	7.5	11.5	9.5	2.1	19206	chr3R	7694525	3` UTR	Nlg1 +	chr3R	7704128	intergenic	not near genes	chr3R	7713731	intergenic	not near genes	chr3R_22_7700001	chr3R_7700001	RG4N_1-HE
3265	chr3R	7729407	7729439	chr3R	7737416	7737448	Stalker2	18	8007	20.0	21.5	20.8	0.8	8041	chr3R	7729407	intergenic	not near genes	chr3R	7733428	intergenic	not near genes	chr3R	7737448	intergenic	not near genes	chr3R_18_7730001	chr3R_7730001	RG4N_1-HE
3266	chr3R	7729440	7729490	chr3R	7737405	7737489	Stalker2	21	8004	11.0	15.5	13.2	1.5	8049	chr3R	7729440	intergenic	not near genes	chr3R	7733464	intergenic	not near genes	chr3R	7737489	intergenic	not near genes	chr3R_21_7730001	chr3R_7730001	RG4N_1-HE
3269	chr3R	7849604	7849664	chr3R	7850842	7850873	1360	13	1230	7.0	15.0	11.0	1.1	1269	chr3R	7849604	intron	CG34384 +	chr3R	7850238	intron	CG34384 +	chr3R	7850873	intron	CG34384 +	chr3R_13_7850001	chr3R_7850001	RG4N_1-HE
3272	chr3R	7973269	7973335	chr3R	7974404	7974470	1360	12	1135	7.0	7.0	7.0	1.5	1201	chr3R	7973269	intergenic	not near genes	chr3R	7973870	intergenic	not near genes	chr3R	7974470	3` UTR	CD98hc -	chr3R_12_7970001	chr3R_7970001	RG4N_1-HE
3276	chr3R	8090495	8090560	chr3R	8094043	8094087	297	28	3543	11.0	12.0	11.5	2.2	3592	chr3R	8090495	intergenic	CR44330 +	chr3R	8092291	intergenic	not near genes	chr3R	8094087	intergenic	CG7900 +	chr3R_28_8090001	chr3R_8090001	RG4N_1-HE
3277	chr3R	8094358	8094426	chr3R	8099732	8099802	Transpac	22	5376	8.0	11.0	9.5	2.1	5444	chr3R	8094358	intron	CG7900 +	chr3R	8097080	intron	CG7900 +	chr3R	8099802	intron	CG7900 +	chr3R_22_8095001	chr3R_8095001	RG4N_1-HE
3278	chr3R	8101712	8101745	chr3R	8104860	8104884	G2	15	3148	17.5	11.5	14.5	1.0	3172	chr3R	8101712	exon	CG7900 +	chr3R	8103298	intron	CG7900 +	chr3R	8104884	3` UTR	CG7900 +	chr3R_15_8100001	chr3R_8100001	RG4N_1-HE
3279	chr3R	8101749	8101783	chr3R	8104859	8104872	G2	11	3142	11.5	11.5	11.5	0.9	3123	chr3R	8101749	exon	CG7900 +	chr3R	8103310	intron	CG7900 +	chr3R	8104872	3` UTR	CG7900 +	chr3R_11_8100001	chr3R_8100001	RG4N_1-HE
3281	chr3R	8207511	8207579	chr3R	8208403	8208493	F-element	14	909	5.0	7.0	6.0	2.0	982	chr3R	8207511	intergenic	not near genes	chr3R	8208002	intergenic	not near genes	chr3R	8208493	intergenic	not near genes	chr3R_14_8205001	chr3R_8205001	RG4N_1-HE
3283	chr3R	8402961	8402977	chr3R	8412191	8412214	roo	18	9234	55.5	25.5	40.5	0.4	9253	chr3R	8402961	intron	CG45263 -	chr3R	8407588	intron	CG45263 -	chr3R	8412214	intron	CG45263 -	chr3R_18_8405001	chr3R_8405001	RG4N_1-HE
3284	chr3R	8402978	8402983	chr3R	8412178	8412209	roo	8	9221	52.0	20.5	36.2	0.2	9231	chr3R	8402978	intron	CG45263 -	chr3R	8407594	intron	CG45263 -	chr3R	8412209	intron	CG45263 -	chr3R_8_8405001	chr3R_8405001	RG4N_1-HE
3285	chr3R	8402984	8403035	chr3R	8412177	8412230	roo	56	9218	29.0	20.0	24.5	2.2	9246	chr3R	8402984	intron	CG45263 -	chr3R	8407607	intron	CG45263 -	chr3R	8412230	intron	CG45263 -	chr3R_56_8405001	chr3R_8405001	RG4N_1-HE
3291	chr3R	8570435	8570499	chr3R	8575126	8575183	HMS-Beagle	18	4694	12.5	9.5	11.0	1.5	4748	chr3R	8570435	intergenic	not near genes	chr3R	8572809	intergenic	not near genes	chr3R	8575183	intergenic	not near genes	chr3R_18_8570001	chr3R_8570001	RG4N_1-HE
3294	chr3R	8601383	8601462	chr3R	8610927	8610988	roo	26	9532	9.5	8.5	9.0	2.6	9605	chr3R	8601383	intron	5-HT2B +	chr3R	8606186	intron	5-HT2B +	chr3R	8610988	intron	5-HT2B +	chr3R_26_8605001	chr3R_8605001	RG4N_1-HE
3296	chr3R	8707305	8707372	chr3R	8709808	8709878	jockey	34	2503	17.0	18.5	17.8	1.8	2573	chr3R	8707305	intergenic	not near genes	chr3R	8708592	intergenic	not near genes	chr3R	8709878	intergenic	not near genes	chr3R_34_8705001	chr3R_8705001	RG4N_1-HE
3306	chr3R	8894808	8894893	chr3R	8896034	8896119	1360	36	1225	11.0	17.5	14.2	2.4	1311	chr3R	8894808	intron	pyd -	chr3R	8895464	intron	pyd -	chr3R	8896119	intron	pyd -	chr3R_36_8895001	chr3R_8895001	RG4N_1-HE
3318	chr3R	9278784	9278801	chr3R	9284041	9284123	Rt1a	14	5315	0.0	12.5	6.2	1.9	5339	chr3R	9278784	intergenic	not near genes	chr3R	9281454	intergenic	not near genes	chr3R	9284123	intergenic	not near genes	chr3R_14_9280001	chr3R_9280001	RG4N_1-HE
3320	chr3R	9319515	9319592	chr3R	9320021	9320097	jockey	40	504	14.0	14.5	14.2	2.6	582	chr3R	9319515	intron	CG8861 -	chr3R	9319806	intron	CG8861 -	chr3R	9320097	intron	CG8861 -	chr3R_40_9315001	chr3R_9315001	RG4N_1-HE
3325	chr3R	9361810	9361830	chr3R	9362122	9362136	pogo	8	310	12.0	22.0	17.0	0.4	326	chr3R	9361810	3` UTR	CG45050 +	chr3R	9361973	3` UTR	CG45050 +	chr3R	9362136	3` UTR	CG45050 +	chr3R_8_9360001	chr3R_9360001	RG4N_1-HE
3330	chr3R	9699915	9699995	chr3R	9700075	9700155	1360	25	155	11.0	11.0	11.0	2.1	240	chr3R	9699915	intron	Unc-115a -	chr3R	9700035	intron	Unc-115a -	chr3R	9700155	intron	Unc-115a -	chr3R_25_9700001	chr3R_9700001	RG4N_1-HE
3337	chr3R	10231729	10231808	chr3R	10237377	10237436	mdg3	26	5644	11.0	10.5	10.8	2.2	5707	chr3R	10231729	intron	CG42795 +	chr3R	10234582	intron	CG42795 +	chr3R	10237436	intron	CG42795 +	chr3R_26_10230001	chr3R_10230001	RG4N_1-HE
3338	chr3R	10255326	10255387	chr3R	10260836	10260898	I-element	11	5509	1.5	4.0	2.8	2.9	5572	chr3R	10255326	intergenic	Sirt6 -,CG3999 +	chr3R	10258112	intron	Sirt6 -	chr3R	10260898	exon	Sirt6 -	chr3R_11_10255001	chr3R_10255001	RG4N_1-HE
3355	chr3R	10804146	10804188	chr3R	10811749	10811791	17.6	11	7599	4.0	11.0	7.5	1.3	7645	chr3R	10804146	intergenic	CG14692 -	chr3R	10807968	intergenic	not near genes	chr3R	10811791	3` UTR	CG14693 -	chr3R_11_10805001	chr3R_10805001	RG4N_1-HE
3361	chr3R	10957813	10957883	chr3R	10963254	10963319	Rt1c	32	5436	16.0	5.0	10.5	2.8	5506	chr3R	10957813	intergenic	not near genes	chr3R	10960566	intergenic	not near genes	chr3R	10963319	intergenic	not near genes	chr3R_32_10960001	chr3R_10960001	RG4N_1-HE
3368	chr3R	11065541	11065597	chr3R	11071260	11071304	297	5	5718	13.0	10.0	11.5	0.4	5763	chr3R	11065541	intergenic	not near genes	chr3R	11068422	intergenic	not near genes	chr3R	11071304	intergenic	not near genes	chr3R_5_11065001	chr3R_11065001	RG4N_1-HE
3382	chr3R	11379175	11379182	chr3R	11388401	11388407	roo	4	9226	14.5	20.0	17.2	0.2	9232	chr3R	11379175	intron	pros +	chr3R	11383791	intron	pros +	chr3R	11388407	intron	pros +	chr3R_4_11380001	chr3R_11380001	RG4N_1-HE
3383	chr3R	11379184	11379207	chr3R	11388399	11388433	roo	16	9225	14.5	19.0	16.8	0.9	9249	chr3R	11379184	intron	pros +	chr3R	11383808	intron	pros +	chr3R	11388433	intron	pros +	chr3R_16_11380001	chr3R_11380001	RG4N_1-HE
3396	chr3R	11841013	11841083	chr3R	11846258	11846344	BS	30	5252	13.5	15.0	14.2	2.0	5331	chr3R	11841013	intron	CG6959 -	chr3R	11843678	intron	CG6959 -	chr3R	11846344	intron	CG6959 -	chr3R_30_11840001	chr3R_11840001	RG4N_1-HE
3402	chr3R	12022823	12022847	chr3R	12025071	12025095	pogo	7	2248	12.0	11.0	11.5	0.6	2272	chr3R	12022823	intergenic	not near genes	chr3R	12023959	intergenic	not near genes	chr3R	12025095	intergenic	not near genes	chr3R_7_12020001	chr3R_12020001	RG4N_1-HE
3403	chr3R	12022854	12022892	chr3R	12025060	12025140	pogo	10	2243	7.5	6.5	7.0	1.2	2286	chr3R	12022854	intergenic	not near genes	chr3R	12023997	intergenic	not near genes	chr3R	12025140	intergenic	not near genes	chr3R_10_12020001	chr3R_12020001	RG4N_1-HE
3429	chr3R	12780233	12780289	chr3R	12780416	12780426	BS	21	180	8.0	4.5	6.2	2.9	193	chr3R	12780233	intron	beat-Vc -	chr3R	12780330	intron	beat-Vc -	chr3R	12780426	intron	beat-Vc -	chr3R_21_12780001	chr3R_12780001	RG4N_1-HE
3437	chr3R	12911699	12911711	chr3R	12911878	12911896	roo	4	179	3.5	6.5	5.0	0.7	197	chr3R	12911699	intergenic	CG10909 -	chr3R	12911798	intergenic	not near genes	chr3R	12911896	intergenic	not near genes	chr3R_4_12910001	chr3R_12910001	RG4N_1-HE
3438	chr3R	12920130	12920148	chr3R	12925375	12925400	copia	6	5259	13.0	11.0	12.0	0.5	5270	chr3R	12920130	intron	beat-Vb +	chr3R	12922765	intron	beat-Vb +	chr3R	12925400	intron	beat-Vb +	chr3R_6_12920001	chr3R_12920001	RG4N_1-HE
3439	chr3R	12920149	12920184	chr3R	12925368	12925407	copia	12	5252	6.5	10.0	8.2	1.3	5258	chr3R	12920149	intron	beat-Vb +	chr3R	12922778	intron	beat-Vb +	chr3R	12925407	intron	beat-Vb +	chr3R_12_12920001	chr3R_12920001	RG4N_1-HE
3450	chr3R	13135769	13135847	chr3R	13138004	13138083	pogo	24	2234	11.5	11.0	11.2	2.0	2314	chr3R	13135769	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13136926	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13138083	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R_24_13135001	chr3R_13135001	RG4N_1-HE
3451	chr3R	13142967	13143053	chr3R	13148615	13148668	mdg3	33	5636	16.5	15.5	16.0	1.9	5701	chr3R	13142967	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13145818	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13148668	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R_33_13145001	chr3R_13145001	RG4N_1-HE
3466	chr3R	13517161	13517172	chr3R	13520050	13520061	jockey	5	2889	19.0	8.0	13.5	0.3	2900	chr3R	13517161	intergenic	not near genes	chr3R	13518611	intergenic	not near genes	chr3R	13520061	intergenic	not near genes	chr3R_5_13515001	chr3R_13515001	RG4N_1-HE
3467	chr3R	13517175	13517233	chr3R	13520048	13520121	jockey	20	2886	8.5	8.0	8.2	2.2	2946	chr3R	13517175	intergenic	not near genes	chr3R	13518648	intergenic	not near genes	chr3R	13520121	intergenic	not near genes	chr3R_20_13515001	chr3R_13515001	RG4N_1-HE
3486	chr3R	13978674	13978687	chr3R	13980917	13980933	Rt1c	7	2243	33.0	13.0	23.0	0.3	2259	chr3R	13978674	intron	rdx -	chr3R	13979804	intron	rdx -	chr3R	13980933	intron	rdx -	chr3R_7_13975001	chr3R_13975001	RG4N_1-HE
3488	chr3R	14021582	14021662	chr3R	14023470	14023557	S-element	47	1893	12.5	16.5	14.5	3.0	1975	chr3R	14021582	intron	rdx -	chr3R	14022570	intron	rdx -	chr3R	14023557	intron	rdx -	chr3R_47_14020001	chr3R_14020001	RG4N_1-HE
3501	chr3R	14180760	14180826	chr3R	14185580	14185659	F-element	36	4834	11.0	20.5	15.8	2.1	4899	chr3R	14180760	intron	Dop1R1 -	chr3R	14183210	intron	Dop1R1 -	chr3R	14185659	intron	Dop1R1 -	chr3R_36_14180001	chr3R_14180001	RG4N_1-HE
3502	chr3R	14194389	14194441	chr3R	14203594	14203645	roo	15	9203	12.5	0.0	6.2	2.1	9256	chr3R	14194389	intron	Dop1R1 -	chr3R	14199017	intron	Dop1R1 -	chr3R	14203645	intron	Dop1R1 -	chr3R_15_14195001	chr3R_14195001	RG4N_1-HE
3503	chr3R	14236883	14236926	chr3R	14244447	14244484	Idefix	4	7563	9.0	7.5	8.2	0.4	7601	chr3R	14236883	exon	CG43291 -	chr3R	14240684	intron	CG43291 -	chr3R	14244484	exon	CG43291 -	chr3R_4_14240001	chr3R_14240001	RG4N_1-HE
3504	chr3R	14246335	14246416	chr3R	14247902	14247983	jockey	11	1560	5.0	7.0	6.0	1.6	1648	chr3R	14246335	intergenic	not near genes	chr3R	14247159	intergenic	not near genes	chr3R	14247983	intergenic	not near genes	chr3R_11_14245001	chr3R_14245001	RG4N_1-HE
3537	chr3R	15041397	15041439	chr3R	15045236	15045278	Doc	9	3836	5.0	11.5	8.2	1.0	3881	chr3R	15041397	intergenic	not near genes	chr3R	15043338	intergenic	not near genes	chr3R	15045278	intergenic	not near genes	chr3R_9_15040001	chr3R_15040001	RG4N_1-HE
3540	chr3R	15059218	15059268	chr3R	15059500	15059548	BS	10	281	0.0	2.5	1.2	4.5	330	chr3R	15059218	intron	dpr9 -	chr3R	15059383	intron	dpr9 -	chr3R	15059548	intron	dpr9 -	chr3R_10_15055001	chr3R_15055001	RG4N_1-HE
3543	chr3R	15079754	15079819	chr3R	15080065	15080131	pogo	24	312	15.0	9.0	12.0	1.8	377	chr3R	15079754	3` UTR	CG6966 -	chr3R	15079942	3` UTR	CG6966 -	chr3R	15080131	3` UTR	CG6966 -	chr3R_24_15075001	chr3R_15075001	RG4N_1-HE
3544	chr3R	15102444	15102525	chr3R	15109771	15109850	412	20	7324	7.5	7.0	7.2	2.4	7406	chr3R	15102444	intron	CG42788 -	chr3R	15106147	intron	CG42788 -	chr3R	15109850	intron	CG42788 -	chr3R_20_15105001	chr3R_15105001	RG4N_1-HE
3546	chr3R	15132004	15132019	chr3R	15135135	15135149	Juan	10	3130	39.5	27.0	33.2	0.3	3145	chr3R	15132004	intergenic	CG42788 -	chr3R	15133576	intergenic	not near genes	chr3R	15135149	3` UTR	CG6912 -	chr3R_10_15130001	chr3R_15130001	RG4N_1-HE
3547	chr3R	15132030	15132070	chr3R	15135130	15135202	Juan	14	3129	24.5	23.5	24.0	0.6	3172	chr3R	15132030	intergenic	CG42788 -	chr3R	15133616	intergenic	not near genes	chr3R	15135202	exon	CG6912 -	chr3R_14_15130001	chr3R_15130001	RG4N_1-HE
3550	chr3R	15162485	15162491	chr3R	15167324	15167330	F-element	5	4839	29.5	8.5	19.0	0.2	4845	chr3R	15162485	intron	Gyc88E +	chr3R	15164908	intron	Gyc88E +	chr3R	15167330	intron	Gyc88E +	chr3R_5_15160001	chr3R_15160001	RG4N_1-HE
3551	chr3R	15162493	15162561	chr3R	15167316	15167393	F-element	15	4837	13.5	8.0	10.8	1.3	4900	chr3R	15162493	intron	Gyc88E +	chr3R	15164943	intron	Gyc88E +	chr3R	15167393	intron	Gyc88E +	chr3R_15_15160001	chr3R_15160001	RG4N_1-HE
3562	chr3R	15601110	15601124	chr3R	15608703	15608717	412	7	7593	35.5	23.5	29.5	0.2	7607	chr3R	15601110	intergenic	not near genes	chr3R	15604914	intergenic	not near genes	chr3R	15608717	intergenic	not near genes	chr3R_7_15600001	chr3R_15600001	RG4N_1-HE
3563	chr3R	15601127	15601191	chr3R	15608698	15608709	412	29	7583	16.5	22.5	19.5	1.4	7582	chr3R	15601127	intergenic	not near genes	chr3R	15604918	intergenic	not near genes	chr3R	15608709	intergenic	not near genes	chr3R_29_15600001	chr3R_15600001	RG4N_1-HE
3566	chr3R	15618681	15618762	chr3R	15626225	15626280	blood	28	7542	6.5	12.5	9.5	2.7	7599	chr3R	15618681	intergenic	not near genes	chr3R	15622480	intergenic	not near genes	chr3R	15626280	intergenic	not near genes	chr3R_28_15620001	chr3R_15620001	RG4N_1-HE
3576	chr3R	15735180	15735233	chr3R	15739971	15740024	F-element	21	4790	17.0	16.0	16.5	1.2	4844	chr3R	15735180	intergenic	not near genes	chr3R	15737602	intergenic	not near genes	chr3R	15740024	intergenic	not near genes	chr3R_21_15735001	chr3R_15735001	RG4N_1-HE
3587	chr3R	16189347	16189423	chr3R	16189820	16189896	invader4	25	473	14.0	9.5	11.8	2.0	549	chr3R	16189347	intron	sra +	chr3R	16189622	intron	sra +	chr3R	16189896	intron	sra +	chr3R_25_16185001	chr3R_16185001	RG4N_1-HE
3609	chr3R	16756265	16756273	chr3R	16762521	16762535	diver	5	6259	14.0	5.5	9.8	0.5	6270	chr3R	16756265	intron	bxd -	chr3R	16759400	intron	bxd -	chr3R	16762535	intron	bxd -	chr3R_5_16755001	chr3R_16755001	RG4N_1-HE
3610	chr3R	16756289	16756341	chr3R	16762512	16762566	diver	9	6244	6.5	3.0	4.8	1.6	6277	chr3R	16756289	intron	bxd -	chr3R	16759428	intron	bxd -	chr3R	16762566	intron	bxd -	chr3R_9_16755001	chr3R_16755001	RG4N_1-HE
3624	chr3R	17294611	17294637	chr3R	17295110	17295136	BS	7	497	14.5	11.5	13.0	0.5	525	chr3R	17294611	intergenic	not near genes	chr3R	17294874	intergenic	not near genes	chr3R	17295136	intergenic	not near genes	chr3R_7_17290001	chr3R_17290001	RG4N_1-HE
3625	chr3R	17294638	17294681	chr3R	17295105	17295177	BS	14	492	9.5	10.5	10.0	1.3	539	chr3R	17294638	intergenic	not near genes	chr3R	17294908	intergenic	not near genes	chr3R	17295177	intergenic	not near genes	chr3R_14_17290001	chr3R_17290001	RG4N_1-HE
3626	chr3R	17346622	17346706	chr3R	17348256	17348340	F-element	23	1632	7.0	13.0	10.0	2.1	1718	chr3R	17346622	intron	beat-IIa -	chr3R	17347481	intron	beat-IIa -	chr3R	17348340	intron	beat-IIa -	chr3R_23_17345001	chr3R_17345001	RG4N_1-HE
3634	chr3R	17509186	17509233	chr3R	17516804	17516852	412	7	7605	2.5	5.0	3.8	1.5	7666	chr3R	17509186	intergenic	not near genes	chr3R	17513019	intergenic	not near genes	chr3R	17516852	intergenic	not near genes	chr3R_7_17510001	chr3R_17510001	RG4N_1-HE
3636	chr3R	17591240	17591264	chr3R	17591731	17591771	F-element	7	501	11.5	3.5	7.5	0.8	531	chr3R	17591240	intergenic	not near genes	chr3R	17591506	intergenic	not near genes	chr3R	17591771	intergenic	not near genes	chr3R_7_17590001	chr3R_17590001	RG4N_1-HE
3637	chr3R	17591278	17591289	chr3R	17591719	17591789	F-element	5	481	8.5	3.0	5.8	0.7	511	chr3R	17591278	intergenic	not near genes	chr3R	17591534	intergenic	not near genes	chr3R	17591789	intergenic	not near genes	chr3R_5_17590001	chr3R_17590001	RG4N_1-HE
3642	chr3R	17638310	17638325	chr3R	17638867	17638882	roo	7	556	0.0	15.0	7.5	0.8	572	chr3R	17638310	intron	CG43175 +	chr3R	17638596	intron	CG43175 +	chr3R	17638882	intron,intron	CG43175 +,CR45222 +	chr3R_7_17635001	chr3R_17635001	RG4N_1-HE
3643	chr3R	17657593	17657661	chr3R	17657810	17657883	INE-1	8	218	0.0	10.0	5.0	1.3	290	chr3R	17657593	intron	CG14322 +	chr3R	17657738	intron	CG14322 +	chr3R	17657883	intron	CG14322 +	chr3R_8_17655001	chr3R_17655001	RG4N_1-HE
3657	chr3R	17925804	17925878	chr3R	17927342	17927359	hobo	14	1528	7.5	12.5	10.0	1.3	1555	chr3R	17925804	intron	cpo +	chr3R	17926582	intron	cpo +	chr3R	17927359	intron	cpo +	chr3R_14_17925001	chr3R_17925001	RG4N_1-HE
3667	chr3R	18032705	18032792	chr3R	18040449	18040536	opus	15	7744	0.5	3.0	1.8	5.4	7831	chr3R	18032705	intergenic	not near genes	chr3R	18036620	intergenic	not near genes	chr3R	18040536	intergenic	not near genes	chr3R_15_18035001	chr3R_18035001	RG4N_1-HE
3669	chr3R	18061543	18061616	chr3R	18063190	18063255	F-element	8	1644	0.0	8.5	4.2	1.5	1712	chr3R	18061543	intergenic	not near genes	chr3R	18062399	intergenic	not near genes	chr3R	18063255	intergenic	not near genes	chr3R_8_18060001	chr3R_18060001	RG4N_1-HE
3690	chr3R	18606435	18606526	chr3R	18610738	18610829	F-element	33	4301	7.0	6.5	6.8	4.2	4394	chr3R	18606435	intron,intron	qin +,CG14304 -	chr3R	18608632	intron,intron	qin +,CG14304 -	chr3R	18610829	intron,intron	qin +,CG14304 -	chr3R_33_18605001	chr3R_18605001	RG4N_1-HE
3753	chr3R	19744185	19744193	chr3R	19749498	19749508	Rt1a	4	5314	42.0	30.0	36.0	0.1	5323	chr3R	19744185	intron,intron	GluClalpha +,CR43488 -	chr3R	19746846	intron	GluClalpha +	chr3R	19749508	intron	GluClalpha +	chr3R_4_19745001	chr3R_19745001	RG4N_1-HE
3754	chr3R	19744194	19744212	chr3R	19749497	19749527	Rt1a	9	5310	36.0	29.5	32.8	0.3	5333	chr3R	19744194	intron,intron	GluClalpha +,CR43488 -	chr3R	19746860	intron	GluClalpha +	chr3R	19749527	intron	GluClalpha +	chr3R_9_19745001	chr3R_19745001	RG4N_1-HE
3768	chr3R	20109488	20109558	chr3R	20114756	20114835	copia	22	5274	11.0	11.5	11.2	1.8	5347	chr3R	20109488	intergenic	not near genes	chr3R	20112162	intergenic	not near genes	chr3R	20114835	intergenic	CG10887 +	chr3R_22_20110001	chr3R_20110001	RG4N_1-HE
3769	chr3R	20156636	20156710	chr3R	20165867	20165936	roo	27	9237	7.5	5.0	6.2	3.8	9300	chr3R	20156636	intergenic	not near genes	chr3R	20161286	intergenic	not near genes	chr3R	20165936	intergenic	not near genes	chr3R_27_20160001	chr3R_20160001	RG4N_1-HE
3777	chr3R	20266465	20266533	chr3R	20272993	20273075	Burdock	28	6532	17.0	10.0	13.5	1.9	6610	chr3R	20266465	intron	cic +	chr3R	20269770	intron	cic +	chr3R	20273075	intron	cic +	chr3R_28_20265001	chr3R_20265001	RG4N_1-HE
3780	chr3R	20330936	20331014	chr3R	20331493	20331571	roo	11	557	5.0	4.0	4.5	2.0	635	chr3R	20330936	intergenic	Sirt2 +	chr3R	20331254	intergenic	Sirt2 +	chr3R	20331571	intergenic	not near genes	chr3R_11_20330001	chr3R_20330001	RG4N_1-HE
3788	chr3R	20506540	20506554	chr3R	20507414	20507428	BS	4	874	14.5	13.0	13.8	0.3	888	chr3R	20506540	intergenic	Or92a +	chr3R	20506984	intergenic	CG4288 -	chr3R	20507428	3` UTR	CG4288 -	chr3R_4_20505001	chr3R_20505001	RG4N_1-HE
3789	chr3R	20506556	20506603	chr3R	20507408	20507467	BS	8	868	10.5	11.0	10.8	0.7	911	chr3R	20506556	intergenic	Or92a +	chr3R	20507012	intergenic	CG4288 -	chr3R	20507467	3` UTR	CG4288 -	chr3R_8_20505001	chr3R_20505001	RG4N_1-HE
3790	chr3R	20512931	20512997	chr3R	20515706	20515772	opus	6	2774	9.0	0.0	4.5	1.1	2841	chr3R	20512931	intergenic	CG4288 -	chr3R	20514352	intergenic	not near genes	chr3R	20515772	intergenic	not near genes	chr3R_6_20510001	chr3R_20510001	RG4N_1-HE
3805	chr3R	20854431	20854438	chr3R	20859292	20859299	Doc	4	4860	15.0	8.0	11.5	0.3	4868	chr3R	20854431	intron	Ir93a -	chr3R	20856865	intron	Ir93a -	chr3R	20859299	exon	Ir93a -	chr3R_4_20855001	chr3R_20855001	RG4N_1-HE
3806	chr3R	20854454	20854472	chr3R	20859289	20859320	Doc	5	4850	10.0	7.5	8.8	0.5	4866	chr3R	20854454	intron	Ir93a -	chr3R	20856887	intron	Ir93a -	chr3R	20859320	exon	Ir93a -	chr3R_5_20855001	chr3R_20855001	RG4N_1-HE
3807	chr3R	20854473	20854508	chr3R	20859278	20859333	Doc	9	4839	5.0	5.5	5.2	1.5	4860	chr3R	20854473	intron	Ir93a -	chr3R	20856903	intron	Ir93a -	chr3R	20859333	exon	Ir93a -	chr3R_9_20855001	chr3R_20855001	RG4N_1-HE
3815	chr3R	21141618	21141704	chr3R	21150170	21150254	Tirant	14	8537	5.0	10.0	7.5	1.6	8636	chr3R	21141618	intron	SNF4Agamma +	chr3R	21145936	intron	SNF4Agamma +	chr3R	21150254	intron	SNF4Agamma +	chr3R_14_21145001	chr3R_21145001	RG4N_1-HE
3824	chr3R	21255087	21255091	chr3R	21255269	21255273	INE-1	4	182	3.5	23.5	13.5	0.3	186	chr3R	21255087	intron	ETHR +	chr3R	21255180	intron	ETHR +	chr3R	21255273	intron	ETHR +	chr3R_4_21255001	chr3R_21255001	RG4N_1-HE
3844	chr3R	21608956	21609019	chr3R	21611640	21611642	NOF	19	2677	9.0	12.0	10.5	1.7	2686	chr3R	21608956	intron	InR -	chr3R	21610299	intron	InR -	chr3R	21611642	intron	InR -	chr3R_19_21610001	chr3R_21610001	RG4N_1-HE
3853	chr3R	21761070	21761093	chr3R	21768533	21768548	mdg1	5	7461	16.5	9.0	12.8	0.4	7478	chr3R	21761070	exon	CG42335 +	chr3R	21764809	intron	CG42335 +	chr3R	21768548	exon	CG42335 +	chr3R_5_21760001	chr3R_21760001	RG4N_1-HE
3854	chr3R	21761107	21761134	chr3R	21768511	21768551	mdg1	7	7431	11.5	6.5	9.0	0.7	7444	chr3R	21761107	exon	CG42335 +	chr3R	21764829	intron	CG42335 +	chr3R	21768551	exon	CG42335 +	chr3R_7_21760001	chr3R_21760001	RG4N_1-HE
3873	chr3R	22234621	22234709	chr3R	22236007	22236098	pogo	23	1388	2.0	8.0	5.0	3.8	1477	chr3R	22234621	intron	SKIP +	chr3R	22235360	intron	SKIP +	chr3R	22236098	intron	SKIP +	chr3R_23_22235001	chr3R_22235001	RG4N_1-HE
3874	chr3R	22239464	22239514	chr3R	22248581	22248633	roo	11	9118	5.0	8.5	6.8	1.4	9169	chr3R	22239464	intron	SKIP +	chr3R	22244048	intron	SKIP +	chr3R	22248633	intron	SKIP +	chr3R_11_22240001	chr3R_22240001	RG4N_1-HE
3879	chr3R	22450494	22450534	chr3R	22453204	22453245	NOF	25	2707	19.0	13.0	16.0	1.5	2751	chr3R	22450494	intron	CG34376 +	chr3R	22451870	intron	CG34376 +	chr3R	22453245	intron	CG34376 +	chr3R_25_22450001	chr3R_22450001	RG4N_1-HE
3880	chr3R	22450542	22450569	chr3R	22453197	22453232	NOF	17	2699	10.0	11.0	10.5	1.5	2690	chr3R	22450542	intron	CG34376 +	chr3R	22451887	intron	CG34376 +	chr3R	22453232	intron	CG34376 +	chr3R_17_22450001	chr3R_22450001	RG4N_1-HE
3902	chr3R	22881218	22881229	chr3R	22884994	22885005	Doc	7	3776	6.0	22.5	14.2	0.5	3787	chr3R	22881218	intergenic	not near genes	chr3R	22883112	intergenic	not near genes	chr3R	22885005	intergenic	not near genes	chr3R_7_22880001	chr3R_22880001	RG4N_1-HE
3940	chr3R	23515509	23515525	chr3R	23516736	23516757	1360	4	1230	4.5	0.5	2.5	1.1	1248	chr3R	23515509	intron	Irk2 -	chr3R	23516133	intron	Irk2 -	chr3R	23516757	intron	Irk2 -	chr3R_4_23515001	chr3R_23515001	RG4N_1-HE
3942	chr3R	23558330	23558416	chr3R	23560180	23560268	Bari1	44	1850	6.5	8.0	7.2	5.4	1938	chr3R	23558330	intron	beat-IV +	chr3R	23559299	intron	beat-IV +	chr3R	23560268	intron	beat-IV +	chr3R_44_23555001	chr3R_23555001	RG4N_1-HE
3952	chr3R	23684636	23684680	chr3R	23685193	23685211	roo	11	541	16.5	14.5	15.5	0.7	575	chr3R	23684636	exon	CG18754 +	chr3R	23684924	intron	CG18754 +	chr3R	23685211	exon	CG18754 +	chr3R_11_23680001	chr3R_23680001	RG4N_1-HE
3953	chr3R	23684682	23684729	chr3R	23685190	23685213	roo	19	530	7.5	14.0	10.8	1.6	531	chr3R	23684682	exon	CG18754 +	chr3R	23684948	intron	CG18754 +	chr3R	23685213	exon	CG18754 +	chr3R_19_23680001	chr3R_23680001	RG4N_1-HE
3958	chr3R	23835345	23835430	chr3R	23844566	23844653	roo	20	9220	9.5	14.5	12.0	1.5	9308	chr3R	23835345	intron	CG34355 +	chr3R	23839999	intron	CG34355 +	chr3R	23844653	intron	CG34355 +	chr3R_20_23835001	chr3R_23835001	RG4N_1-HE
3959	chr3R	23851017	23851077	chr3R	23858754	23858815	opus	29	7737	9.0	12.5	10.8	2.5	7798	chr3R	23851017	3` UTR	CG34355 +	chr3R	23854916	intergenic	not near genes	chr3R	23858815	intergenic	not near genes	chr3R_29_23850001	chr3R_23850001	RG4N_1-HE
3971	chr3R	24072067	24072120	chr3R	24072528	24072621	jockey	24	489	6.5	0.0	3.2	5.7	554	chr3R	24072067	intron	4EHP -	chr3R	24072344	intron	4EHP -	chr3R	24072621	intron	4EHP -	chr3R_24_24070001	chr3R_24070001	RG4N_1-HE
3972	chr3R	24076870	24076927	chr3R	24078387	24078455	hobo	9	1531	3.0	3.5	3.2	2.1	1585	chr3R	24076870	intron	4EHP -	chr3R	24077662	intron	4EHP -	chr3R	24078455	intron	4EHP -	chr3R_9_24075001	chr3R_24075001	RG4N_1-HE
3977	chr3R	24207169	24207245	chr3R	24212315	24212321	flea	14	5140	1.0	12.0	6.5	1.9	5152	chr3R	24207169	intron	twin -	chr3R	24209745	intron	twin -	chr3R	24212321	intron	twin -	chr3R_14_24205001	chr3R_24205001	RG4N_1-HE
3985	chr3R	24493222	24493295	chr3R	24493522	24493594	BS	15	300	8.0	7.0	7.5	1.8	372	chr3R	24493222	intergenic	not near genes	chr3R	24493408	intergenic	not near genes	chr3R	24493594	intergenic	not near genes	chr3R_15_24490001	chr3R_24490001	RG4N_1-HE
3991	chr3R	24594607	24594655	chr3R	24594918	24594966	pogo	18	310	18.5	23.0	20.8	0.8	359	chr3R	24594607	intron	mld +	chr3R	24594786	intron	mld +	chr3R	24594966	intron	mld +	chr3R_18_24590001	chr3R_24590001	RG4N_1-HE
4001	chr3R	24927066	24927148	chr3R	24931928	24932010	Doc	17	4857	6.0	6.0	6.0	2.4	4944	chr3R	24927066	3` UTR	Trf4-2 +	chr3R	24929538	intergenic	not near genes	chr3R	24932010	5` UTR	CG11771 +	chr3R_17_24925001	chr3R_24925001	RG4N_1-HE
4013	chr3R	25324338	25324389	chr3R	25328974	25329025	Doc	12	4633	3.0	11.0	7.0	1.5	4687	chr3R	25324338	exon	CHKov1 -	chr3R	25326682	intron	CHKov1 -	chr3R	25329025	intron	CHKov1 -	chr3R_12_25325001	chr3R_25325001	RG4N_1-HE
4028	chr3R	25725776	25725841	chr3R	25735006	25735072	roo	24	9230	9.0	9.5	9.2	2.4	9296	chr3R	25725776	intron	LpR2 -	chr3R	25730424	intron	LpR2 -	chr3R	25735072	intron	LpR2 -	chr3R_24_25730001	chr3R_25730001	RG4N_1-HE
4030	chr3R	25832641	25832664	chr3R	25841894	25841917	roo	10	9248	21.5	15.5	18.5	0.5	9276	chr3R	25832641	exon	alpha4GT2 +	chr3R	25837279	intron	alpha4GT2 +	chr3R	25841917	exon	alpha4GT2 +	chr3R_10_25835001	chr3R_25835001	RG4N_1-HE
4031	chr3R	25832666	25832717	chr3R	25841893	25841933	roo	23	9239	7.5	15.0	11.2	1.9	9267	chr3R	25832666	exon	alpha4GT2 +	chr3R	25837300	intron	alpha4GT2 +	chr3R	25841933	exon	alpha4GT2 +	chr3R_23_25835001	chr3R_25835001	RG4N_1-HE
4042	chr3R	26108777	26108821	chr3R	26117415	26117426	Tirant	4	8626	6.0	0.0	3.0	1.0	8649	chr3R	26108777	5` UTR	CG31324 +	chr3R	26113102	intron	CG31324 +	chr3R	26117426	intron	CG31324 +	chr3R_4_26110001	chr3R_26110001	RG4N_1-HE
4063	chr3R	26376263	26376358	chr3R	26385494	26385603	roo	37	9232	12.0	0.0	6.0	5.3	9340	chr3R	26376263	intergenic	not near genes	chr3R	26380933	intergenic	not near genes	chr3R	26385603	intergenic	not near genes	chr3R_37_26380001	chr3R_26380001	RG4N_1-HE
4071	chr3R	26510433	26510519	chr3R	26519565	26519651	roo	14	9132	2.0	11.5	6.8	1.8	9218	chr3R	26510433	intron	plum -	chr3R	26515042	intron	plum -	chr3R	26519651	intron,5` UTR	plum -,CR45226 +	chr3R_14_26515001	chr3R_26515001	RG4N_1-HE
4072	chr3R	26558287	26558361	chr3R	26565642	26565680	Stalker4	27	7361	12.5	7.0	9.8	2.5	7393	chr3R	26558287	intron	scrib +	chr3R	26561984	intron	scrib +	chr3R	26565680	intron	scrib +	chr3R_27_26560001	chr3R_26560001	RG4N_1-HE
4075	chr3R	26642697	26642746	chr3R	26643151	26643211	jockey	19	462	13.0	10.5	11.8	1.5	514	chr3R	26642697	intergenic	not near genes	chr3R	26642954	intergenic	not near genes	chr3R	26643211	intergenic	not near genes	chr3R_19_26640001	chr3R_26640001	RG4N_1-HE
4082	chr3R	26810490	26810586	chr3R	26811046	26811071	roo	35	549	10.5	14.5	12.5	2.6	581	chr3R	26810490	intron	Tl +	chr3R	26810780	intron	Tl +	chr3R	26811071	intron	Tl +	chr3R_35_26810001	chr3R_26810001	RG4N_1-HE
4086	chr3R	27007342	27007434	chr3R	27016547	27016584	roo	16	9200	10.0	9.5	9.8	1.5	9242	chr3R	27007342	intron	RYa-R +	chr3R	27011963	intron	RYa-R +	chr3R	27016584	intron	RYa-R +	chr3R_16_27010001	chr3R_27010001	RG4N_1-HE
4093	chr3R	27140475	27140504	chr3R	27148130	27148180	412	18	7673	23.0	16.5	19.8	0.9	7705	chr3R	27140475	intron	CG6051 -	chr3R	27144328	intron	CG6051 -	chr3R	27148180	intron	CG6051 -	chr3R_18_27140001	chr3R_27140001	RG4N_1-HE
4094	chr3R	27140505	27140537	chr3R	27148128	27148212	412	23	7671	15.5	15.5	15.5	1.4	7707	chr3R	27140505	intron	CG6051 -	chr3R	27144358	intron	CG6051 -	chr3R	27148212	intron	CG6051 -	chr3R_23_27140001	chr3R_27140001	RG4N_1-HE
4099	chr3R	27342743	27342808	chr3R	27351395	27351460	Tirant	16	8649	8.5	6.0	7.2	2.0	8717	chr3R	27342743	intron	CG42534 +	chr3R	27347102	intron	CG42534 +	chr3R	27351460	intron	CG42534 +	chr3R_16_27345001	chr3R_27345001	RG4N_1-HE
4105	chr3R	27521090	27521124	chr3R	27530370	27530404	roo	7	9280	0.0	3.0	1.5	2.8	9314	chr3R	27521090	intron	CG12885 +	chr3R	27525747	intron	CG12885 +	chr3R	27530404	intron	CG12885 +	chr3R_7_27525001	chr3R_27525001	RG4N_1-HE
4113	chr3R	27725516	27725574	chr3R	27731029	27731087	I-element	7	5513	5.5	4.0	4.8	1.2	5571	chr3R	27725516	intergenic	not near genes	chr3R	27728302	intergenic	not near genes	chr3R	27731087	intergenic	not near genes	chr3R_7_27725001	chr3R_27725001	RG4N_1-HE
4122	chr3R	27856699	27856778	chr3R	27858253	27858310	hopper2	44	1550	24.5	12.5	18.5	2.3	1611	chr3R	27856699	intron	CG34353 -	chr3R	27857504	intron	CG34353 -	chr3R	27858310	intron	CG34353 -	chr3R_44_27855001	chr3R_27855001	RG4N_1-HE
4124	chr3R	27862919	27862960	chr3R	27868276	27868335	Transpac	12	5370	0.5	11.5	6.0	1.7	5416	chr3R	27862919	intron	CG34353 -	chr3R	27865627	intron	CG34353 -	chr3R	27868335	intron	CG34353 -	chr3R_12_27865001	chr3R_27865001	RG4N_1-HE
4125	chr3R	27875637	27875718	chr3R	27882763	27882843	297	32	7125	11.5	19.5	15.5	1.9	7206	chr3R	27875637	intron	CG34353 -	chr3R	27879240	intron	CG34353 -	chr3R	27882843	intron	CG34353 -	chr3R_32_27875001	chr3R_27875001	RG4N_1-HE
4134	chr3R	28068422	28068516	chr3R	28073935	28073995	I-element	12	5505	0.0	6.0	3.0	3.0	5573	chr3R	28068422	intron	CG34362 +	chr3R	28071208	intron	CG34362 +	chr3R	28073995	intron	CG34362 +	chr3R_12_28070001	chr3R_28070001	RG4N_1-HE
4139	chr3R	28173605	28173693	chr3R	28181106	28181173	mdg1	11	7499	2.5	4.0	3.2	2.6	7568	chr3R	28173605	intron	CG34354 +	chr3R	28177389	intron	CG34354 +	chr3R	28181173	intron	CG34354 +	chr3R_11_28175001	chr3R_28175001	RG4N_1-HE
4141	chr3R	28253300	28253311	chr3R	28255874	28255880	jockey	4	2574	18.5	9.0	13.8	0.3	2580	chr3R	28253300	intergenic	not near genes	chr3R	28254590	intergenic	not near genes	chr3R	28255880	intergenic	not near genes	chr3R_4_28250001	chr3R_28250001	RG4N_1-HE
4142	chr3R	28253316	28253356	chr3R	28255867	28255937	jockey	21	2574	12.0	8.5	10.2	1.9	2621	chr3R	28253316	intergenic	not near genes	chr3R	28254626	intergenic	not near genes	chr3R	28255937	intergenic	not near genes	chr3R_21_28250001	chr3R_28250001	RG4N_1-HE
4148	chr3R	28302034	28302117	chr3R	28302547	28302630	jockey	13	512	5.5	2.0	3.8	2.7	596	chr3R	28302034	intergenic	not near genes	chr3R	28302332	intergenic	not near genes	chr3R	28302630	intergenic	not near genes	chr3R_13_28300001	chr3R_28300001	RG4N_1-HE
4167	chr3R	28758227	28758232	chr3R	28763915	28763920	roo	5	5687	19.0	0.0	9.5	0.5	5693	chr3R	28758227	exon	aqrs -	chr3R	28761074	intergenic	not near genes	chr3R	28763920	intergenic	not near genes	chr3R_5_28760001	chr3R_28760001	RG4N_1-HE
4168	chr3R	28758251	28758280	chr3R	28771329	28771358	Stalker4	13	13078	11.5	6.0	8.8	1.3	13107	chr3R	28758251	intergenic	aqrs -	chr3R	28764804	intergenic	not near genes	chr3R	28771358	intergenic	not near genes	chr3R_13_28760001	chr3R_28760001	RG4N_1-HE
4171	chr3R	28792817	28792889	chr3R	28797972	28798033	jockey	7	5147	5.0	6.0	5.5	1.1	5216	chr3R	28792817	intergenic	not near genes	chr3R	28795425	intergenic	not near genes	chr3R	28798033	intergenic	not near genes	chr3R_7_28795001	chr3R_28795001	RG4N_1-HE
4189	chr3R	29079316	29079406	chr3R	29080753	29080776	NOF	33	1437	12.5	9.0	10.8	2.8	1460	chr3R	29079316	intron	CG11873 +	chr3R	29080046	intron	CG11873 +	chr3R	29080776	intron	CG11873 +	chr3R_33_29080001	chr3R_29080001	RG4N_1-HE
4204	chr3R	29319764	29319845	chr3R	29320154	29320234	jockey	26	386	5.5	8.5	7.0	3.2	470	chr3R	29319764	intergenic	Cnx99A -	chr3R	29319999	intergenic	Cnx99A -	chr3R	29320234	intergenic	not near genes	chr3R_26_29315001	chr3R_29315001	RG4N_1-HE
4211	chr3R	29406582	29406639	chr3R	29407907	29407958	jockey	17	1345	8.5	10.0	9.2	1.7	1376	chr3R	29406582	intron	Ptp99A +	chr3R	29407270	intron	Ptp99A +	chr3R	29407958	intron	Ptp99A +	chr3R_17_29405001	chr3R_29405001	RG4N_1-HE
4227	chr3R	29738201	29738286	chr3R	29739736	29739816	hobo	21	1536	3.5	3.0	3.2	5.0	1615	chr3R	29738201	intergenic	CG1969 +,CG7598 +	chr3R	29739008	intron	CG1969 +	chr3R	29739816	5` UTR	CG1969 +	chr3R_21_29735001	chr3R_29735001	RG4N_1-HE
4228	chr3R	29760308	29760376	chr3R	29761580	29761648	pogo	19	1271	5.0	2.5	3.8	4.0	1340	chr3R	29760308	intergenic	not near genes	chr3R	29760978	intergenic	not near genes	chr3R	29761648	intergenic	not near genes	chr3R_19_29760001	chr3R_29760001	RG4N_1-HE
4230	chr3R	29881960	29882024	chr3R	29891188	29891252	roo	18	9227	9.0	7.5	8.2	2.0	9292	chr3R	29881960	intron	CG31038 +	chr3R	29886606	intron	CG31038 +	chr3R	29891252	intron	CG31038 +	chr3R_18_29885001	chr3R_29885001	RG4N_1-HE
4240	chr3R	30084792	30084885	chr3R	30086330	30086388	hobo	20	1524	5.5	7.0	6.2	2.8	1596	chr3R	30084792	intron	sima +	chr3R	30085590	intron	sima +	chr3R	30086388	intron	sima +	chr3R_20_30085001	chr3R_30085001	RG4N_1-HE
4249	chr3R	30238698	30238736	chr3R	30239933	30239958	1360	11	1234	10.5	0.0	5.2	1.8	1260	chr3R	30238698	intergenic	not near genes	chr3R	30239328	intergenic	not near genes	chr3R	30239958	intergenic	not near genes	chr3R_11_30235001	chr3R_30235001	RG4N_1-HE
4261	chr3R	30317288	30317356	chr3R	30324916	30324947	roo	24	7649	0.0	5.5	2.8	6.3	7659	chr3R	30317288	intron	hdc +	chr3R	30321118	intron	hdc +	chr3R	30324947	intron	hdc +	chr3R_24_30320001	chr3R_30320001	RG4N_1-HE
4265	chr3R	30375481	30375568	chr3R	30383175	30383247	412	8	7692	7.0	4.0	5.5	1.2	7766	chr3R	30375481	intergenic	not near genes	chr3R	30379364	intergenic	not near genes	chr3R	30383247	intergenic	not near genes	chr3R_8_30375001	chr3R_30375001	RG4N_1-HE
4267	chr3R	30396158	30396231	chr3R	30404495	30404551	roo	18	8335	10.0	8.5	9.2	1.8	8393	chr3R	30396158	intergenic	not near genes	chr3R	30400354	intergenic	not near genes	chr3R	30404551	5` UTR	CR45570 +	chr3R_18_30400001	chr3R_30400001	RG4N_1-HE
4272	chr3R	30480418	30480494	chr3R	30482953	30483016	jockey	14	2532	11.0	3.5	7.2	1.7	2598	chr3R	30480418	intron	PH4alphaEFB +	chr3R	30481717	intron	PH4alphaEFB +	chr3R	30483016	intron	PH4alphaEFB +	chr3R_14_30480001	chr3R_30480001	RG4N_1-HE
4281	chr3R	30679471	30679549	chr3R	30687002	30687089	blood	21	7534	10.0	11.5	10.8	1.8	7618	chr3R	30679471	intergenic	not near genes	chr3R	30683280	intergenic	not near genes	chr3R	30687089	intergenic	not near genes	chr3R_21_30680001	chr3R_30680001	RG4N_1-HE
4285	chr3R	30818751	30818829	chr3R	30820387	30820449	1360	25	1630	7.0	16.0	11.5	2.0	1698	chr3R	30818751	intron	cindr +	chr3R	30819600	intron	cindr +	chr3R	30820449	intron	cindr +	chr3R_25_30815001	chr3R_30815001	RG4N_1-HE
4298	chr3R	31074156	31074232	chr3R	31081835	31081917	springer	12	7681	8.5	3.5	6.0	1.7	7761	chr3R	31074156	intron	Sox100B +	chr3R	31078036	intron	Sox100B +	chr3R	31081917	exon	Sox100B +	chr3R_12_31075001	chr3R_31075001	RG4N_1-HE
4304	chr3R	31279233	31279325	chr3R	31285562	31285654	diver	18	6320	7.0	8.5	7.8	2.0	6421	chr3R	31279233	intergenic	not near genes	chr3R	31282444	intergenic	not near genes	chr3R	31285654	intergenic	not near genes	chr3R_18_31280001	chr3R_31280001	RG4N_1-HE
4311	chr3R	31413044	31413113	chr3R	31418302	31418364	copia	4	5256	2.0	0.0	1.0	2.0	5320	chr3R	31413044	intron	Gprk2 +	chr3R	31415704	intron	Gprk2 +	chr3R	31418364	intron	Gprk2 +	chr3R_4_31415001	chr3R_31415001	RG4N_1-HE
4323	chr3R	31691470	31691503	chr3R	31696307	31696328	Doc	11	4831	19.0	12.0	15.5	0.7	4858	chr3R	31691470	intergenic	not near genes	chr3R	31693899	intergenic	not near genes	chr3R	31696328	intergenic	not near genes	chr3R_11_31690001	chr3R_31690001	RG4N_1-HE
4324	chr3R	31691510	31691554	chr3R	31696299	31696391	Doc	15	4827	7.5	10.5	9.0	1.5	4881	chr3R	31691510	intergenic	not near genes	chr3R	31693950	intergenic	not near genes	chr3R	31696391	intergenic	not near genes	chr3R_15_31690001	chr3R_31690001	RG4N_1-HE
4337	chr3R	31997939	31998016	chr3R	32005472	32005526	blood	52	7536	6.0	10.0	8.0	5.8	7587	chr3R	31997939	intron	heph -	chr3R	32001732	intron	heph -	chr3R	32005526	intron	heph -	chr3R_52_32000001	chr3R_32000001	RG4N_1-HE
4343	chr4	76435	76453	chr4	81949	81967	I-element	10	5512	38.5	13.0	25.8	0.4	5532	chr4	76435	intron	pan +	chr4	79201	intron	pan +	chr4	81967	intron	pan +	chr4_10_75001	chr4_75001	RG4N_1-HE
4344	chr4	76456	76506	chr4	81948	82019	I-element	33	5509	14.0	12.5	13.2	2.3	5563	chr4	76456	intron	pan +	chr4	79238	intron	pan +	chr4	82019	intron	pan +	chr4_33_75001	chr4_75001	RG4N_1-HE
4346	chr4	189679	189686	chr4	192436	192444	INE-1	4	2758	16.0	64.5	40.2	0.1	2765	chr4	189679	intron	CG2316 -	chr4	191062	intron	CG2316 -	chr4	192444	intron	CG2316 -	chr4_4_190001	chr4_190001	RG4N_1-HE
4347	chr4	189676	189743	chr4	192445	192500	INE-1	18	2758	20.5	61.0	40.8	0.4	2824	chr4	189676	intron	CG2316 -	chr4	191088	intron	CG2316 -	chr4	192500	intron	CG2316 -	chr4_18_190001	chr4_190001	RG4N_1-HE
4351	chr4	319944	320004	chr4	328191	328251	Stalker2	6	8247	0.0	5.5	2.8	1.6	8307	chr4	319944	3` UTR	CG32850 +	chr4	324098	intron	CG32850 +	chr4	328251	3` UTR,3` UTR	CG32850 +,PMCA -	chr4_6_320001	chr4_320001	RG4N_1-HE
4357	chr4	671544	671624	chr4	680198	680277	Tirant	49	8651	15.0	19.5	17.2	2.7	8733	chr4	671544	intron	CG11360 +	chr4	675910	intron	CG11360 +	chr4	680277	intron	CG11360 +	chr4_49_675001	chr4_675001	RG4N_1-HE
4362	chr4	1135887	1135951	chr4	1136192	1136256	INE-1	24	310	65.0	94.0	79.5	0.3	369	chr4	1135887	3` UTR	CG11155 +	chr4	1136072	3` UTR	CG11155 +	chr4	1136256	3` UTR	CG11155 +	chr4_24_1135001	chr4_1135001	RG4N_1-HE
4368	chrX	295796	295837	chrX	303487	303528	412	27	7689	24.5	18.0	21.2	1.2	7732	chrX	295796	intron	CG3777 +	chrX	299662	intron	CG3777 +	chrX	303528	intron	CG3777 +	chrX_27_295001	chrX_295001	RG4N_1-HE
4369	chrX	295838	295873	chrX	303479	303564	412	18	7688	14.5	16.0	15.2	1.1	7726	chrX	295838	intron	CG3777 +	chrX	299701	intron	CG3777 +	chrX	303564	intron	CG3777 +	chrX_18_295001	chrX_295001	RG4N_1-HE
4370	chrX	318417	318498	chrX	323573	323585	flea	69	5154	21.0	24.5	22.8	2.9	5168	chrX	318417	intron,intron	CG3777 +,CG32816 -	chrX	321001	intron,intron	CG3777 +,CG32816 -	chrX	323585	intron,intron	CG3777 +,CG32816 -	chrX_69_320001	chrX_320001	RG4N_1-HE
4371	chrX	428367	428443	chrX	434631	434714	3S18	36	6267	13.0	10.5	11.8	2.8	6347	chrX	428367	intron	CG32816 -	chrX	431540	intron	CG32816 -	chrX	434714	intron	CG32816 -	chrX_36_430001	chrX_430001	RG4N_1-HE
4376	chrX	551367	551373	chrX	559000	559005	412	4	7632	28.0	18.0	23.0	0.2	7638	chrX	551367	intron	Appl +	chrX	555186	intron	Appl +	chrX	559005	intron	Appl +	chrX_4_555001	chrX_555001	RG4N_1-HE
4377	chrX	551378	551403	chrX	558995	559035	412	17	7629	26.0	13.0	19.5	0.8	7657	chrX	551378	intron	Appl +	chrX	555206	intron	Appl +	chrX	559035	intron	Appl +	chrX_17_555001	chrX_555001	RG4N_1-HE
4378	chrX	551406	551448	chrX	558987	559079	412	27	7618	19.0	11.0	15.0	1.7	7673	chrX	551406	intron	Appl +	chrX	555242	intron	Appl +	chrX	559079	intron	Appl +	chrX_27_555001	chrX_555001	RG4N_1-HE
4388	chrX	812217	812293	chrX	817917	817970	297	8	5690	2.5	6.5	4.5	1.5	5753	chrX	812217	intron	CG43867 -	chrX	815094	intron	CG43867 -	chrX	817970	intron	CG43867 -	chrX_8_815001	chrX_815001	RG4N_1-HE
4389	chrX	827544	827620	chrX	835407	835483	roo	27	7862	13.0	11.5	12.2	2.0	7939	chrX	827544	intron	CG43867 -	chrX	831514	intron	CG43867 -	chrX	835483	intron	CG43867 -	chrX_27_830001	chrX_830001	RG4N_1-HE
4391	chrX	906640	906733	chrX	908500	908560	S-element	36	1852	3.5	8.0	5.8	5.3	1920	chrX	906640	intron	CG43867 -	chrX	907600	intron	CG43867 -	chrX	908560	intron	CG43867 -	chrX_36_905001	chrX_905001	RG4N_1-HE
4398	chrX	1033305	1033322	chrX	1040993	1041026	412	8	7697	27.0	4.0	15.5	0.5	7721	chrX	1033305	intron	su(w[a]) +	chrX	1037166	intron	su(w[a]) +	chrX	1041026	intron	su(w[a]) +	chrX_8_1035001	chrX_1035001	RG4N_1-HE
4400	chrX	1063704	1063747	chrX	1072568	1072611	roo	15	8864	20.0	16.5	18.2	0.8	8907	chrX	1063704	intron	CR44779 +	chrX	1068158	intron	CR44779 +	chrX	1072611	intron	CR44779 +	chrX_15_1065001	chrX_1065001	RG4N_1-HE
4411	chrX	1357716	1357791	chrX	1367957	1368018	Doc	33	10237	22.0	0.0	11.0	2.8	10302	chrX	1357716	intergenic	png -	chrX	1362867	intergenic	not near genes	chrX	1368018	intergenic	not near genes	chrX_33_1360001	chrX_1360001	RG4N_1-HE
4416	chrX	1517977	1518043	chrX	1523444	1523516	jockey	4	5464	4.0	2.0	3.0	1.0	5539	chrX	1517977	intergenic	inc +	chrX	1520746	intergenic	not near genes	chrX	1523516	intergenic	not near genes	chrX_4_1520001	chrX_1520001	RG4N_1-HE
4422	chrX	1930480	1930514	chrX	1938122	1938156	opus	6	7642	3.0	3.0	3.0	1.5	7676	chrX	1930480	3` UTR	CG11596 +	chrX	1934318	intergenic	not near genes	chrX	1938156	3` UTR	CG3857 -	chrX_6_1930001	chrX_1930001	RG4N_1-HE
4423	chrX	1930519	1930550	chrX	1938160	1938191	opus	11	7641	0.5	5.5	3.0	2.8	7672	chrX	1930519	intergenic	CG11596 +	chrX	1934355	intergenic	not near genes	chrX	1938191	3` UTR	CG3857 -	chrX_11_1930001	chrX_1930001	RG4N_1-HE
4427	chrX	2308786	2308804	chrX	2317438	2317450	Tirant	6	8649	16.0	22.5	19.2	0.3	8664	chrX	2308786	intron	phl +	chrX	2313118	intron	phl +	chrX	2317450	intron	phl +	chrX_6_2310001	chrX_2310001	RG4N_1-HE
4428	chrX	2308806	2308825	chrX	2317428	2317443	Tirant	8	8638	10.5	20.5	15.5	0.5	8637	chrX	2308806	intron	phl +	chrX	2313124	intron	phl +	chrX	2317443	intron	phl +	chrX_8_2310001	chrX_2310001	RG4N_1-HE
4430	chrX	2399796	2399828	chrX	2408204	2408206	roo	5	8396	16.5	4.5	10.5	0.4	8410	chrX	2399796	intergenic	not near genes	chrX	2404001	intergenic	not near genes	chrX	2408206	intergenic	not near genes	chrX_5_2400001	chrX_2400001	RG4N_1-HE
4431	chrX	2399829	2399856	chrX	2408197	2408268	roo	14	8389	8.0	2.5	5.2	2.3	8439	chrX	2399829	intergenic	not near genes	chrX	2404048	intergenic	not near genes	chrX	2408268	intergenic	not near genes	chrX_14_2400001	chrX_2400001	RG4N_1-HE
4432	chrX	2399858	2399870	chrX	2408195	2408254	roo	11	8377	7.5	1.5	4.5	2.0	8396	chrX	2399858	intergenic	not near genes	chrX	2404056	intergenic	not near genes	chrX	2408254	intergenic	not near genes	chrX_11_2400001	chrX_2400001	RG4N_1-HE
4444	chrX	2664319	2664351	chrX	2665536	2665568	1360	11	1214	28.5	11.0	19.8	0.5	1249	chrX	2664319	intron	sgg +	chrX	2664944	intron	sgg +	chrX	2665568	intron	sgg +	chrX_11_2660001	chrX_2660001	RG4N_1-HE
4445	chrX	2664361	2664371	chrX	2665567	2665588	1360	5	1215	21.0	21.0	21.0	0.2	1227	chrX	2664361	intron	sgg +	chrX	2664974	intron	sgg +	chrX	2665588	intron	sgg +	chrX_5_2660001	chrX_2660001	RG4N_1-HE
4446	chrX	2664373	2664387	chrX	2665538	2665604	1360	10	1204	16.0	11.0	13.5	0.7	1231	chrX	2664373	intron	sgg +	chrX	2664988	intron	sgg +	chrX	2665604	intron	sgg +	chrX_10_2660001	chrX_2660001	RG4N_1-HE
4450	chrX	2823742	2823780	chrX	2832338	2832391	roo	18	8605	12.0	9.5	10.8	1.5	8649	chrX	2823742	intron	kirre +	chrX	2828066	intron	kirre +	chrX	2832391	intron	kirre +	chrX_18_2825001	chrX_2825001	RG4N_1-HE
4451	chrX	2844843	2844924	chrX	2852324	2852405	mdg1	52	7479	11.5	13.0	12.2	3.9	7562	chrX	2844843	intron	kirre +	chrX	2848624	intron	kirre +	chrX	2852405	intron	kirre +	chrX_52_2845001	chrX_2845001	RG4N_1-HE
4456	chrX	3057964	3058052	chrX	3058276	3058364	pogo	23	310	6.0	3.0	4.5	4.2	400	chrX	3057964	intron	kirre +	chrX	3058164	intron	kirre +	chrX	3058364	intron	kirre +	chrX_23_3055001	chrX_3055001	RG4N_1-HE
4457	chrX	3075561	3075643	chrX	3080943	3081016	Transpac	10	5378	12.5	0.0	6.2	1.4	5455	chrX	3075561	intron	kirre +	chrX	3078288	intron	kirre +	chrX	3081016	intron	kirre +	chrX_10_3075001	chrX_3075001	RG4N_1-HE
4463	chrX	3218485	3218502	chrX	3227705	3227722	roo	4	9220	0.5	5.0	2.8	1.1	9237	chrX	3218485	intron	dnc +	chrX	3223104	intron	dnc +	chrX	3227722	intron	dnc +	chrX_4_3220001	chrX_3220001	RG4N_1-HE
4468	chrX	3414968	3415050	chrX	3421224	3421331	3S18	11	6259	3.5	0.0	1.8	3.9	6363	chrX	3414968	intron,intron	CR44999 +,CG12535 -	chrX	3418150	intron,intron	CR44999 +,CG12535 -	chrX	3421331	intron,intron	CR44999 +,CG12535 -	chrX_11_3415001	chrX_3415001	RG4N_1-HE
4472	chrX	3493054	3493102	chrX	3502260	3502320	roo	11	9222	9.0	4.5	6.8	1.4	9266	chrX	3493054	intron,intron	CR44999 +,Gas8 -	chrX	3497687	intron,intron	CR44999 +,Gas8 -	chrX	3502320	intron,intron	CR44999 +,Gas8 -	chrX_11_3495001	chrX_3495001	RG4N_1-HE
4479	chrX	3597489	3597577	chrX	3619728	3619818	roo	55	22237	20.5	16.5	18.5	2.8	22329	chrX	3597489	intron	AstA-R1 +	chrX	3608654	intron	AstA-R1 +	chrX	3619818	intron	AstA-R1 +	chrX_55_3605001	chrX_3605001	RG4N_1-HE
4488	chrX	3726697	3726794	chrX	3730168	3730231	NOF	22	3446	0.5	0.0	0.2	18.3	3534	chrX	3726697	intron	tlk +	chrX	3728464	intron	tlk +	chrX	3730231	intron	tlk +	chrX_22_3725001	chrX_3725001	RG4N_1-HE
4495	chrX	3842287	3842353	chrX	3842576	3842641	pogo	27	284	8.0	7.5	7.8	3.1	354	chrX	3842287	intron	ec +	chrX	3842464	intron	ec +	chrX	3842641	intron	ec +	chrX_27_3840001	chrX_3840001	RG4N_1-HE
4504	chrX	3986855	3986893	chrX	3994532	3994573	412	10	7681	7.0	1.0	4.0	2.0	7718	chrX	3986855	intergenic	not near genes	chrX	3990714	intergenic	not near genes	chrX	3994573	intergenic	not near genes	chrX_10_3990001	chrX_3990001	RG4N_1-HE
4512	chrX	4157834	4157859	chrX	4164960	4164985	297	12	7125	29.0	18.5	23.8	0.5	7151	chrX	4157834	intron	Fas2 -	chrX	4161410	intron	Fas2 -	chrX	4164985	intron	Fas2 -	chrX_12_4160001	chrX_4160001	RG4N_1-HE
4513	chrX	4157861	4157911	chrX	4164951	4165015	297	17	7120	13.0	18.0	15.5	1.0	7154	chrX	4157861	intron	Fas2 -	chrX	4161438	intron	Fas2 -	chrX	4165015	intron	Fas2 -	chrX_17_4160001	chrX_4160001	RG4N_1-HE
4533	chrX	4700336	4700415	chrX	4700750	4700797	jockey	23	412	4.0	9.0	6.5	3.1	461	chrX	4700336	3` UTR	ctp +	chrX	4700566	3` UTR	ctp +	chrX	4700797	3` UTR	ctp +	chrX_23_4700001	chrX_4700001	RG4N_1-HE
4534	chrX	4731735	4731848	chrX	4736910	4737000	jockey	6	5163	3.0	0.5	1.8	2.1	5265	chrX	4731735	intergenic	not near genes	chrX	4734368	intergenic	not near genes	chrX	4737000	intergenic	not near genes	chrX_6_4730001	chrX_4730001	RG4N_1-HE
4540	chrX	4763202	4763284	chrX	4763753	4763854	Stalker4	15	558	5.5	0.0	2.8	3.9	652	chrX	4763202	intergenic	not near genes	chrX	4763528	intergenic	not near genes	chrX	4763854	intergenic	not near genes	chrX_15_4760001	chrX_4760001	RG4N_1-HE
4542	chrX	4792322	4792396	chrX	4792816	4792852	jockey	13	489	0.0	7.0	3.5	2.9	530	chrX	4792322	intergenic	not near genes	chrX	4792587	intergenic	not near genes	chrX	4792852	intergenic	not near genes	chrX_13_4790001	chrX_4790001	RG4N_1-HE
4543	chrX	4827919	4827926	chrX	4835355	4835365	Stalker4	4	7440	24.5	13.0	18.8	0.2	7446	chrX	4827919	intergenic	not near genes	chrX	4831642	intergenic	not near genes	chrX	4835365	intergenic	not near genes	chrX_4_4830001	chrX_4830001	RG4N_1-HE
4544	chrX	4827928	4827991	chrX	4835354	4835401	Stalker4	25	7426	13.5	13.0	13.2	1.8	7473	chrX	4827928	intergenic	not near genes	chrX	4831664	intergenic	not near genes	chrX	4835401	intergenic	not near genes	chrX_25_4830001	chrX_4830001	RG4N_1-HE
4550	chrX	4989979	4990070	chrX	4997264	4997355	roo	27	7283	7.0	12.5	9.8	2.5	7376	chrX	4989979	intron	CR44833 -	chrX	4993667	intron	CR44833 -	chrX	4997355	intron	CR44833 -	chrX_27_4990001	chrX_4990001	RG4N_1-HE
4553	chrX	5096230	5096250	chrX	5103849	5103886	springer	6	7632	21.5	8.0	14.8	0.4	7656	chrX	5096230	intron,intron	CG15465 +,rg +	chrX	5100058	intron,intron	CG15465 +,rg +	chrX	5103886	intron,intron	CG15465 +,rg +	chrX_6_5100001	chrX_5100001	RG4N_1-HE
4554	chrX	5096253	5096295	chrX	5103839	5103929	springer	16	7624	9.5	6.0	7.8	1.8	7676	chrX	5096253	intron,intron	CG15465 +,rg +	chrX	5100091	intron,intron	CG15465 +,rg +	chrX	5103929	intron,intron	CG15465 +,rg +	chrX_16_5100001	chrX_5100001	RG4N_1-HE
4561	chrX	5338645	5338735	chrX	5339968	5340042	jockey	37	1311	11.0	5.5	8.2	4.0	1397	chrX	5338645	intergenic	not near genes	chrX	5339344	intergenic	not near genes	chrX	5340042	intergenic	SK +	chrX_37_5335001	chrX_5335001	RG4N_1-HE
4569	chrX	5481076	5481081	chrX	5485089	5485105	I-element	5	4022	0.0	5.5	2.8	1.3	4029	chrX	5481076	intron	SPR +	chrX	5483090	intron	SPR +	chrX	5485105	intron	SPR +	chrX_5_5480001	chrX_5480001	RG4N_1-HE
4575	chrX	5524783	5524800	chrX	5528713	5528722	412	5	3928	3.5	1.5	2.5	1.4	3939	chrX	5524783	intergenic	snoRNA:Psi28S-3342 -	chrX	5526752	intergenic	not near genes	chrX	5528722	intergenic	Vsx2 -	chrX_5_5525001	chrX_5525001	RG4N_1-HE
4580	chrX	5727360	5727415	chrX	5732170	5732225	Doc	13	4810	4.0	4.0	4.0	2.6	4865	chrX	5727360	intron	CG32758 -	chrX	5729792	intron	CG32758 -	chrX	5732225	intron	CG32758 -	chrX_13_5725001	chrX_5725001	RG4N_1-HE
4585	chrX	5883748	5883780	chrX	5884060	5884083	pogo	10	307	9.0	7.0	8.0	1.1	335	chrX	5883748	intron	CR45668 -	chrX	5883916	intron	CR45668 -	chrX	5884083	intron	CR45668 -	chrX_10_5880001	chrX_5880001	RG4N_1-HE
4586	chrX	5883784	5883809	chrX	5884050	5884121	pogo	5	303	6.5	6.5	6.5	0.7	337	chrX	5883784	intron	CR45668 -	chrX	5883952	intron	CR45668 -	chrX	5884121	intron	CR45668 -	chrX_5_5880001	chrX_5880001	RG4N_1-HE
4587	chrX	5884104	5884177	chrX	5884416	5884486	pogo	23	309	7.5	9.5	8.5	2.4	382	chrX	5884104	intron	CR45668 -	chrX	5884295	intron	CR45668 -	chrX	5884486	intron	CR45668 -	chrX_23_5880001	chrX_5880001	RG4N_1-HE
4593	chrX	6171551	6171578	chrX	6179017	6179082	Quasimodo	6	7481	17.5	9.0	13.2	0.4	7531	chrX	6171551	intron	Ca-alpha1T -	chrX	6175316	intron	Ca-alpha1T -	chrX	6179082	intron	Ca-alpha1T -	chrX_6_6175001	chrX_6175001	RG4N_1-HE
4594	chrX	6171580	6171611	chrX	6179014	6179113	Quasimodo	7	7482	13.0	8.0	10.5	0.6	7533	chrX	6171580	intron	Ca-alpha1T -	chrX	6175346	intron	Ca-alpha1T -	chrX	6179113	intron	Ca-alpha1T -	chrX_7_6175001	chrX_6175001	RG4N_1-HE
4599	chrX	6335149	6335235	chrX	6337721	6337770	Tirant	14	2571	1.5	6.5	4.0	2.8	2621	chrX	6335149	intergenic	not near genes	chrX	6336460	intergenic	not near genes	chrX	6337770	5` UTR	CG3842 +	chrX_14_6335001	chrX_6335001	RG4N_1-HE
4600	chrX	6392809	6392885	chrX	6397645	6397721	Doc	11	4831	2.5	2.0	2.2	3.4	4912	chrX	6392809	intergenic	not near genes	chrX	6395265	intergenic	not near genes	chrX	6397721	intergenic	not near genes	chrX_11_6395001	chrX_6395001	RG4N_1-HE
4602	chrX	6429971	6429992	chrX	6435479	6435480	Rt1c	8	5516	22.0	16.0	19.0	0.4	5509	chrX	6429971	intron	CG42340 -	chrX	6432726	intron	CG42340 -	chrX	6435480	intron	CG42340 -	chrX_8_6430001	chrX_6430001	RG4N_1-HE
4603	chrX	6445246	6445271	chrX	6451075	6451100	297	7	5829	24.0	12.5	18.2	0.4	5854	chrX	6445246	intron	CG42340 -	chrX	6448173	intron	CG42340 -	chrX	6451100	intron	CG42340 -	chrX_7_6445001	chrX_6445001	RG4N_1-HE
4604	chrX	6445272	6445322	chrX	6451072	6451151	297	4	5819	14.0	12.0	13.0	0.3	5879	chrX	6445272	intron	CG42340 -	chrX	6448212	intron	CG42340 -	chrX	6451151	intron	CG42340 -	chrX_4_6445001	chrX_6445001	RG4N_1-HE
4606	chrX	6562760	6562773	chrX	6571313	6571327	Tirant	6	8554	13.0	5.5	9.2	0.6	8567	chrX	6562760	intron	CG34417 +	chrX	6567044	intron	CG34417 +	chrX	6571327	intron	CG34417 +	chrX_6_6565001	chrX_6565001	RG4N_1-HE
4607	chrX	6562779	6562847	chrX	6571305	6571366	Tirant	15	8529	6.0	4.5	5.2	2.4	8587	chrX	6562779	intron	CG34417 +	chrX	6567072	intron	CG34417 +	chrX	6571366	intron	CG34417 +	chrX_15_6565001	chrX_6565001	RG4N_1-HE
4610	chrX	6605500	6605509	chrX	6608568	6608577	Burdock	8	3068	6.0	6.0	6.0	1.1	3077	chrX	6605500	intron	pigs +	chrX	6607038	intron	pigs +	chrX	6608577	intron	pigs +	chrX_8_6605001	chrX_6605001	RG4N_1-HE
4622	chrX	7023537	7023568	chrX	7030998	7031012	Tabor	6	7458	14.5	3.0	8.8	0.6	7475	chrX	7023537	intron	CG12541 -	chrX	7027274	intron	CG12541 -	chrX	7031012	intron	CG12541 -	chrX_6_7025001	chrX_7025001	RG4N_1-HE
4623	chrX	7023572	7023603	chrX	7030994	7031044	Tabor	10	7450	10.5	3.0	6.8	1.3	7472	chrX	7023572	intron	CG12541 -	chrX	7027308	intron	CG12541 -	chrX	7031044	intron	CG12541 -	chrX_10_7025001	chrX_7025001	RG4N_1-HE
4629	chrX	7480779	7480791	chrX	7482349	7482349	jockey	6	1571	29.5	55.0	42.2	0.1	1570	chrX	7480779	intergenic	not near genes	chrX	7481564	intergenic	not near genes	chrX	7482349	intergenic	not near genes	chrX_6_7480001	chrX_7480001	RG4N_1-HE
4630	chrX	7480802	7480804	chrX	7482345	7482351	jockey	6	1554	22.0	53.5	37.8	0.2	1549	chrX	7480802	intergenic	not near genes	chrX	7481576	intergenic	not near genes	chrX	7482351	intergenic	not near genes	chrX_6_7480001	chrX_7480001	RG4N_1-HE
4637	chrX	7702853	7702923	chrX	7703357	7703424	jockey	89	507	25.0	17.5	21.2	4.0	571	chrX	7702853	intron	CHES-1-like -	chrX	7703138	intron	CHES-1-like -	chrX	7703424	intron	CHES-1-like -	chrX_89_7700001	chrX_7700001	RG4N_1-HE
4639	chrX	7784190	7784248	chrX	7784541	7784621	jockey	11	370	17.0	14.5	15.8	0.7	431	chrX	7784190	intergenic	not near genes	chrX	7784406	intergenic	not near genes	chrX	7784621	intergenic	not near genes	chrX_11_7780001	chrX_7780001	RG4N_1-HE
4641	chrX	7845660	7845684	chrX	7847222	7847246	hopper2	5	1558	24.5	2.0	13.2	0.4	1586	chrX	7845660	intergenic	not near genes	chrX	7846453	intergenic	not near genes	chrX	7847246	intergenic	not near genes	chrX_5_7845001	chrX_7845001	RG4N_1-HE
4642	chrX	7845685	7845754	chrX	7847221	7847316	hopper2	5	1548	10.5	2.0	6.2	0.7	1631	chrX	7845685	intergenic	not near genes	chrX	7846500	intergenic	not near genes	chrX	7847316	intergenic	not near genes	chrX_5_7845001	chrX_7845001	RG4N_1-HE
4648	chrX	8031390	8031420	chrX	8035754	8035800	Juan	8	4377	6.5	10.0	8.2	0.9	4410	chrX	8031390	intergenic	not near genes	chrX	8033595	intergenic	not near genes	chrX	8035800	3` UTR	CG2233 -	chrX_8_8030001	chrX_8030001	RG4N_1-HE
4655	chrX	8364794	8364857	chrX	8365269	8365332	BS	29	474	4.5	11.0	7.8	3.3	538	chrX	8364794	intron	nAChRalpha3 -	chrX	8365063	intron	nAChRalpha3 -	chrX	8365332	intron	nAChRalpha3 -	chrX_29_8365001	chrX_8365001	RG4N_1-HE
4678	chrX	8922275	8922357	chrX	8922773	8922793	jockey	39	499	12.0	14.5	13.2	2.7	518	chrX	8922275	intron	rdgA +	chrX	8922534	intron	rdgA +	chrX	8922793	intron	rdgA +	chrX_39_8920001	chrX_8920001	RG4N_1-HE
4679	chrX	8927529	8927601	chrX	8929869	8929942	NOF	24	2338	8.5	10.5	9.5	2.3	2413	chrX	8927529	intron	rdgA +	chrX	8928736	intron	rdgA +	chrX	8929942	intron	rdgA +	chrX_24_8925001	chrX_8925001	RG4N_1-HE
4681	chrX	8948693	8948784	chrX	8956274	8956365	roo	23	7578	9.0	10.0	9.5	2.2	7672	chrX	8948693	intron	rdgA +	chrX	8952529	intron	rdgA +	chrX	8956365	intron	rdgA +	chrX_23_8950001	chrX_8950001	RG4N_1-HE
4707	chrX	9508087	9508158	chrX	9509676	9509725	jockey	18	1586	10.5	7.5	9.0	1.8	1638	chrX	9508087	intron	CG32700 -	chrX	9508906	intron	CG32700 -	chrX	9509725	intron	CG32700 -	chrX_18_9505001	chrX_9505001	RG4N_1-HE
4710	chrX	9575746	9575762	chrX	9576129	9576157	mdg3	6	387	22.0	6.5	14.2	0.4	411	chrX	9575746	intron,exon	CG32699 -,CG42395 -	chrX	9575952	intron,intron	CG32699 -,CG42395 -	chrX	9576157	intron,5` UTR	CG32699 -,CG42395 -	chrX_6_9575001	chrX_9575001	RG4N_1-HE
4711	chrX	9575774	9575818	chrX	9576115	9576210	mdg3	17	387	11.5	4.0	7.8	1.9	436	chrX	9575774	intron,exon	CG32699 -,CG42395 -	chrX	9575992	intron,intron	CG32699 -,CG42395 -	chrX	9576210	intron,5` UTR	CG32699 -,CG42395 -	chrX_17_9575001	chrX_9575001	RG4N_1-HE
4728	chrX	10138172	10138248	chrX	10145747	10145823	412	24	7573	7.5	3.5	5.5	3.7	7651	chrX	10138172	intron,intron	RhoU +,CR44894 -	chrX	10141998	intron,intron	RhoU +,CR44894 -	chrX	10145823	intron,intron	RhoU +,CR44894 -	chrX_24_10140001	chrX_10140001	RG4N_1-HE
4742	chrX	10550808	10550876	chrX	10552333	10552414	hobo	28	1531	6.0	8.0	7.0	3.5	1606	chrX	10550808	intron	spri -	chrX	10551611	intron	spri -	chrX	10552414	intron	spri -	chrX_28_10550001	chrX_10550001	RG4N_1-HE
4744	chrX	10685986	10686071	chrX	10691194	10691243	roo	54	5206	17.5	0.5	9.0	5.4	5257	chrX	10685986	intron	X11Lbeta +	chrX	10688614	intron	X11Lbeta +	chrX	10691243	intron	X11Lbeta +	chrX_54_10685001	chrX_10685001	RG4N_1-HE
4746	chrX	10772626	10772692	chrX	10772779	10772837	Tirant	15	139	4.5	4.5	4.5	2.7	211	chrX	10772626	5` UTR	CG15211 +	chrX	10772732	intron	CG15211 +	chrX	10772837	intron	CG15211 +	chrX_15_10770001	chrX_10770001	RG4N_1-HE
4758	chrX	11184213	11184264	chrX	11189350	11189411	flea	4	5144	8.0	8.0	8.0	0.4	5198	chrX	11184213	intergenic	not near genes	chrX	11186812	intergenic	not near genes	chrX	11189411	intergenic	not near genes	chrX_4_11185001	chrX_11185001	RG4N_1-HE
4759	chrX	11194373	11194453	chrX	11201853	11201940	gypsy5	4	7480	0.5	6.0	3.2	1.0	7567	chrX	11194373	intergenic	not near genes	chrX	11198156	intergenic	not near genes	chrX	11201940	intergenic	CG11106 +	chrX_4_11195001	chrX_11195001	RG4N_1-HE
4764	chrX	11268547	11268588	chrX	11270090	11270132	hopper2	12	1540	10.5	14.0	12.2	0.9	1585	chrX	11268547	intron	CG44422 -	chrX	11269340	intron	CG44422 -	chrX	11270132	intron	CG44422 -	chrX_12_11265001	chrX_11265001	RG4N_1-HE
4765	chrX	11312014	11312076	chrX	11319427	11319500	Stalker2	11	7414	6.5	6.0	6.2	1.5	7486	chrX	11312014	intergenic	not near genes	chrX	11315757	intergenic	not near genes	chrX	11319500	intergenic	not near genes	chrX_11_11315001	chrX_11315001	RG4N_1-HE
4773	chrX	11534990	11535043	chrX	11541530	11541580	Burdock	11	6536	12.5	8.0	10.2	1.0	6590	chrX	11534990	intron	Drak +	chrX	11538285	intron	Drak +	chrX	11541580	intron	Drak +	chrX_11_11535001	chrX_11535001	RG4N_1-HE
4774	chrX	11571389	11571469	chrX	11571704	11571781	pogo	27	312	5.0	5.0	5.0	4.5	392	chrX	11571389	3` UTR,3` UTR	CG11699 +,Kmn1 -	chrX	11571585	3` UTR	Kmn1 -	chrX	11571781	3` UTR	Kmn1 -	chrX_27_11570001	chrX_11570001	RG4N_1-HE
4776	chrX	11633357	11633437	chrX	11640471	11640551	297	43	7113	8.0	9.0	8.5	4.5	7194	chrX	11633357	intron	Ptp10D +	chrX	11636954	intron	Ptp10D +	chrX	11640551	intron	Ptp10D +	chrX_43_11635001	chrX_11635001	RG4N_1-HE
4777	chrX	11645052	11645128	chrX	11648292	11648369	NOF	29	3240	14.5	5.5	10.0	2.6	3317	chrX	11645052	intron	Ptp10D +	chrX	11646710	intron	Ptp10D +	chrX	11648369	intron	Ptp10D +	chrX_29_11645001	chrX_11645001	RG4N_1-HE
4794	chrX	12168085	12168133	chrX	12173598	12173616	I-element	9	5505	0.0	4.0	2.0	3.0	5531	chrX	12168085	intron	Ten-a +	chrX	12170850	intron	Ten-a +	chrX	12173616	intron	Ten-a +	chrX_9_12170001	chrX_12170001	RG4N_1-HE
4803	chrX	12381790	12381820	chrX	12385774	12385790	flea	5	3981	0.0	5.5	2.8	1.3	4000	chrX	12381790	intergenic	not near genes	chrX	12383790	intergenic	not near genes	chrX	12385790	intergenic	not near genes	chrX_5_12380001	chrX_12380001	RG4N_1-HE
4824	chrX	12930539	12930603	chrX	12937724	12937763	HMS-Beagle	24	7183	5.0	7.0	6.0	3.4	7224	chrX	12930539	intron	fne +	chrX	12934151	intron	fne +	chrX	12937763	intron	fne +	chrX_24_12930001	chrX_12930001	RG4N_1-HE
4841	chrX	13401422	13401504	chrX	13401844	13401925	jockey	4	422	0.0	5.5	2.8	1.1	503	chrX	13401422	intergenic	CG1673 +,CG12725 -	chrX	13401674	intergenic	CG12725 -,CG1673 +	chrX	13401925	3` UTR	CG12725 -	chrX_4_13400001	chrX_13400001	RG4N_1-HE
4842	chrX	13402968	13403039	chrX	13403166	13403237	X-element	11	197	6.5	9.0	7.8	1.2	269	chrX	13402968	intergenic	CG12725 -	chrX	13403102	intergenic	CG12725 -	chrX	13403237	intergenic	CG12725 -	chrX_11_13400001	chrX_13400001	RG4N_1-HE
4843	chrX	13429421	13429474	chrX	13430624	13430694	jockey	14	1216	7.5	7.0	7.2	1.7	1273	chrX	13429421	intergenic	not near genes	chrX	13430058	intergenic	not near genes	chrX	13430694	intergenic	not near genes	chrX_14_13430001	chrX_13430001	RG4N_1-HE
4845	chrX	13463586	13463664	chrX	13469234	13469312	mdg3	10	5647	3.5	4.0	3.8	2.1	5726	chrX	13463586	intron	Neto +	chrX	13466449	intron	Neto +	chrX	13469312	intron	Neto +	chrX_10_13465001	chrX_13465001	RG4N_1-HE
4864	chrX	13937914	13938008	chrX	13941266	13941365	I-element	14	3357	1.5	3.5	2.5	4.0	3451	chrX	13937914	intron	mamo -	chrX	13939640	intron	mamo -	chrX	13941365	intron	mamo -	chrX_14_13935001	chrX_13935001	RG4N_1-HE
4871	chrX	14104996	14105045	chrX	14114192	14114267	roo	13	9212	6.5	6.5	6.5	1.7	9271	chrX	14104996	intergenic	not near genes	chrX	14109632	intergenic	not near genes	chrX	14114267	5` UTR	CR44657 +	chrX_13_14105001	chrX_14105001	RG4N_1-HE
4874	chrX	14157528	14157608	chrX	14163256	14163336	297	11	5728	8.0	3.5	5.8	1.6	5808	chrX	14157528	intergenic	not near genes	chrX	14160432	intergenic	not near genes	chrX	14163336	intergenic	not near genes	chrX_11_14160001	chrX_14160001	RG4N_1-HE
4892	chrX	14416251	14416336	chrX	14421090	14421116	F-element	16	4835	13.5	15.5	14.5	1.0	4865	chrX	14416251	intron	dpr8 +	chrX	14418684	intron	dpr8 +	chrX	14421116	intron	dpr8 +	chrX_16_14415001	chrX_14415001	RG4N_1-HE
4896	chrX	14589690	14589701	chrX	14589956	14590012	pogo	6	298	7.0	5.5	6.2	0.8	322	chrX	14589690	intron	CG9413 -	chrX	14589851	intron	CG9413 -	chrX	14590012	intron	CG9413 -	chrX_6_14585001	chrX_14585001	RG4N_1-HE
4899	chrX	14636409	14636457	chrX	14641921	14641968	I-element	9	5508	20.0	12.5	16.2	0.5	5559	chrX	14636409	intron	NetA -	chrX	14639188	intron	NetA -	chrX	14641968	intron	NetA -	chrX_9_14635001	chrX_14635001	RG4N_1-HE
4900	chrX	14636463	14636478	chrX	14641953	14641990	I-element	9	5505	11.5	17.0	14.2	0.6	5527	chrX	14636463	intron	NetA -	chrX	14639226	intron	NetA -	chrX	14641990	intron	NetA -	chrX_9_14635001	chrX_14635001	RG4N_1-HE
4902	chrX	14777980	14778041	chrX	14782846	14782909	Doc	22	4868	15.5	15.0	15.2	1.4	4929	chrX	14777980	3` UTR	CG5347 +	chrX	14780444	intergenic	not near genes	chrX	14782909	intergenic	Ag5r2 -	chrX_22_14780001	chrX_14780001	RG4N_1-HE
4907	chrX	14818713	14818767	chrX	14823985	14824042	copia	13	5272	10.5	4.5	7.5	1.5	5329	chrX	14818713	intron	rut -	chrX	14821378	intron	rut -	chrX	14824042	intron	rut -	chrX_13_14820001	chrX_14820001	RG4N_1-HE
4913	chrX	14936779	14936842	chrX	14946120	14946187	roo	7	9345	4.0	0.0	2.0	2.3	9408	chrX	14936779	intron	pdgy -	chrX	14941483	intron	pdgy -	chrX	14946187	intron	pdgy -	chrX_7_14940001	chrX_14940001	RG4N_1-HE
4918	chrX	15017919	15017963	chrX	15018104	15018148	INE-1	14	183	3.0	6.5	4.8	2.4	229	chrX	15017919	exon	hiw -	chrX	15018034	intron	hiw -	chrX	15018148	exon	hiw -	chrX_14_15015001	chrX_15015001	RG4N_1-HE
4924	chrX	15273682	15273738	chrX	15274876	15274922	1360	23	1214	8.5	9.0	8.8	2.3	1240	chrX	15273682	intergenic	not near genes	chrX	15274302	intergenic	not near genes	chrX	15274922	intergenic	not near genes	chrX_23_15270001	chrX_15270001	RG4N_1-HE
4925	chrX	15326675	15326718	chrX	15326943	15326987	I-element	5	268	0.0	4.5	2.2	1.6	312	chrX	15326675	3` UTR	Top1 +	chrX	15326831	3` UTR	Top1 +	chrX	15326987	3` UTR	Top1 +	chrX_5_15325001	chrX_15325001	RG4N_1-HE
4927	chrX	15413004	15413059	chrX	15417365	15417384	Juan	20	4364	16.5	0.0	8.2	2.2	4380	chrX	15413004	intron	Cngl -	chrX	15415194	intron	Cngl -	chrX	15417384	intron	Cngl -	chrX_20_15415001	chrX_15415001	RG4N_1-HE
4928	chrX	15421858	15421869	chrX	15423440	15423451	pogo	5	1581	37.0	6.0	21.5	0.2	1593	chrX	15421858	intron	Cngl -	chrX	15422654	intron	Cngl -	chrX	15423451	intron	Cngl -	chrX_5_15420001	chrX_15420001	RG4N_1-HE
4929	chrX	15421876	15421943	chrX	15423432	15423525	pogo	28	1578	17.5	5.5	11.5	2.2	1649	chrX	15421876	intron	Cngl -	chrX	15422700	intron	Cngl -	chrX	15423525	intron	Cngl -	chrX_28_15420001	chrX_15420001	RG4N_1-HE
4931	chrX	15435615	15435691	chrX	15436103	15436195	rover	12	489	1.5	10.5	6.0	1.7	580	chrX	15435615	intron	Cngl -	chrX	15435905	intron	Cngl -	chrX	15436195	intron	Cngl -	chrX_12_15435001	chrX_15435001	RG4N_1-HE
4953	chrX	16222707	16222799	chrX	16231126	16231220	roo	13	8419	0.5	7.0	3.8	2.7	8513	chrX	16222707	intergenic	not near genes	chrX	16226964	intergenic	not near genes	chrX	16231220	intergenic	not near genes	chrX_13_16225001	chrX_16225001	RG4N_1-HE
4956	chrX	16340614	16340659	chrX	16349829	16349874	roo	13	9214	3.0	2.5	2.8	3.4	9260	chrX	16340614	3` UTR	Dsp1 +	chrX	16345244	intergenic	not near genes	chrX	16349874	intergenic	sl +	chrX_13_16345001	chrX_16345001	RG4N_1-HE
4959	chrX	16492584	16492589	chrX	16498231	16498236	mdg3	4	5648	25.0	15.5	20.2	0.2	5652	chrX	16492584	intron	para -	chrX	16495410	intron	para -	chrX	16498236	intron	para -	chrX_4_16495001	chrX_16495001	RG4N_1-HE
4960	chrX	16492592	16492662	chrX	16498229	16498310	mdg3	32	5645	5.5	15.5	10.5	2.8	5718	chrX	16492592	intron	para -	chrX	16495451	intron	para -	chrX	16498310	exon	para -	chrX_32_16495001	chrX_16495001	RG4N_1-HE
4986	chrX	17057883	17057941	chrX	17058178	17058253	pogo	5	308	1.5	5.5	3.5	1.1	370	chrX	17057883	intron	CG45002 -	chrX	17058068	intron	CG45002 -	chrX	17058253	intron	CG45002 -	chrX_5_17055001	chrX_17055001	RG4N_1-HE
4995	chrX	17195159	17195225	chrX	17200315	17200374	flea	12	5151	6.0	6.0	6.0	1.7	5215	chrX	17195159	3` UTR	baz +	chrX	17197766	3` UTR	baz +	chrX	17200374	3` UTR	baz +	chrX_12_17195001	chrX_17195001	RG4N_1-HE
5007	chrX	17431310	17431340	chrX	17431712	17431752	jockey	13	404	8.5	0.0	4.2	2.5	442	chrX	17431310	intron	CG12994 -	chrX	17431531	intron	CG12994 -	chrX	17431752	intron	CG12994 -	chrX_13_17430001	chrX_17430001	RG4N_1-HE
5014	chrX	17556897	17556951	chrX	17557454	17557521	mdg1	4	555	7.0	11.0	9.0	0.4	624	chrX	17556897	intron	CG43658 -	chrX	17557209	intron	CG43658 -	chrX	17557521	intron	CG43658 -	chrX_4_17555001	chrX_17555001	RG4N_1-HE
5018	chrX	17792897	17792963	chrX	17796260	17796331	flea	13	3364	12.0	9.5	10.8	1.1	3434	chrX	17792897	intron	OdsH +	chrX	17794614	intron	OdsH +	chrX	17796331	intron	OdsH +	chrX_13_17790001	chrX_17790001	RG4N_1-HE
5042	chrX	18429451	18429510	chrX	18434827	18434892	Transpac	14	5380	4.5	5.0	4.8	2.4	5441	chrX	18429451	intergenic	not near genes	chrX	18432172	intergenic	not near genes	chrX	18434892	intergenic	not near genes	chrX_14_18430001	chrX_18430001	RG4N_1-HE
5049	chrX	18555339	18555412	chrX	18556940	18557011	transib2	11	1600	2.0	3.5	2.8	2.9	1672	chrX	18555339	intron	Bx +	chrX	18556175	intron	Bx +	chrX	18557011	intron	Bx +	chrX_11_18555001	chrX_18555001	RG4N_1-HE
5063	chrX	18754287	18754326	chrX	18758029	18758042	297	4	3734	3.5	6.5	5.0	0.7	3755	chrX	18754287	intergenic	not near genes	chrX	18756164	intergenic	not near genes	chrX	18758042	intergenic	not near genes	chrX_4_18755001	chrX_18755001	RG4N_1-HE
5067	chrX	18957005	18957073	chrX	18965731	18965800	roo	16	8725	4.0	0.0	2.0	5.3	8795	chrX	18957005	intron	CG43759 +	chrX	18961402	intron	CG43759 +	chrX	18965800	intron	CG43759 +	chrX_16_18960001	chrX_18960001	RG4N_1-HE
5073	chrX	19060350	19060423	chrX	19065205	19065278	Doc	23	4854	6.0	13.0	9.5	2.2	4928	chrX	19060350	intron	CG14190 +	chrX	19062814	intron	CG14190 +	chrX	19065278	intron	CG14190 +	chrX_23_19060001	chrX_19060001	RG4N_1-HE
5077	chrX	19136504	19136580	chrX	19143494	19143504	412	9	6973	5.0	2.5	3.8	1.9	7000	chrX	19136504	intergenic	not near genes	chrX	19140004	intergenic	not near genes	chrX	19143504	3` UTR	RhoGAP18B -	chrX_9_19140001	chrX_19140001	RG4N_1-HE
5085	chrX	19356937	19357023	chrX	19358449	19358552	NOF	42	1525	11.5	0.0	5.8	6.2	1615	chrX	19356937	intron	kek5 +	chrX	19357744	intron	kek5 +	chrX	19358552	intron	kek5 +	chrX_42_19355001	chrX_19355001	RG4N_1-HE
5086	chrX	19380097	19380187	chrX	19380410	19380487	pogo	53	310	13.5	0.5	7.0	6.6	390	chrX	19380097	intron	kek5 +	chrX	19380292	intron	kek5 +	chrX	19380487	intron	kek5 +	chrX_53_19380001	chrX_19380001	RG4N_1-HE
5096	chrX	19472090	19472120	chrX	19472731	19472761	jockey	4	641	2.0	4.5	3.2	1.0	671	chrX	19472090	intergenic	kek5 +	chrX	19472426	intergenic	not near genes	chrX	19472761	intergenic	not near genes	chrX_4_19470001	chrX_19470001	RG4N_1-HE
5107	chrX	19710008	19710095	chrX	19711865	19711904	S-element	22	1847	6.0	8.0	7.0	2.8	1896	chrX	19710008	intron	meso18E -	chrX	19710956	intron	meso18E -	chrX	19711904	intron	meso18E -	chrX_22_19710001	chrX_19710001	RG4N_1-HE
5111	chrX	19797268	19797339	chrX	19804667	19804737	Stalker4	28	7394	14.0	11.5	12.8	2.0	7469	chrX	19797268	intergenic	not near genes	chrX	19801002	intergenic	not near genes	chrX	19804737	intergenic	not near genes	chrX_28_19800001	chrX_19800001	RG4N_1-HE
5139	chrX	20377259	20377327	chrX	20378796	20378839	hobo	5	1532	4.0	4.0	4.0	1.0	1580	chrX	20377259	intergenic	not near genes	chrX	20378049	intergenic	not near genes	chrX	20378839	intergenic	not near genes	chrX_5_20375001	chrX_20375001	RG4N_1-HE
5144	chrX	20504068	20504152	chrX	20505660	20505740	transib2	15	1589	9.0	8.5	8.8	1.5	1672	chrX	20504068	intron	RhoGAP19D -	chrX	20504904	intron	RhoGAP19D -	chrX	20505740	intron	RhoGAP19D -	chrX_15_20500001	chrX_20500001	RG4N_1-HE
5161	chrX	20836680	20836753	chrX	20844352	20844410	roo	8	7663	4.0	2.0	3.0	2.0	7730	chrX	20836680	intron	shakB -	chrX	20840545	intron	shakB -	chrX	20844410	intron	shakB -	chrX_8_20840001	chrX_20840001	RG4N_1-HE
5166	chrX	20940665	20940682	chrX	20942201	20942222	hobo	11	1539	24.0	8.0	16.0	0.6	1557	chrX	20940665	intergenic	not near genes	chrX	20941444	intergenic	not near genes	chrX	20942222	intergenic	not near genes	chrX_11_20940001	chrX_20940001	RG4N_1-HE
5167	chrX	20940683	20940715	chrX	20942197	20942219	hobo	15	1526	19.5	7.0	13.2	1.1	1536	chrX	20940683	intergenic	not near genes	chrX	20941451	intergenic	not near genes	chrX	20942219	intergenic	not near genes	chrX_15_20940001	chrX_20940001	RG4N_1-HE
5179	chrX	21061798	21061873	chrX	21062357	21062378	roo	15	553	6.5	4.5	5.5	2.3	580	chrX	21061798	intron	bves +	chrX	21062088	intron	bves +	chrX	21062378	intron,3` UTR	bves +,CG32512 -	chrX_15_21060001	chrX_21060001	RG4N_1-HE
5182	chrX	21086092	21086154	chrX	21087162	21087217	jockey	6	1067	16.0	3.5	9.8	0.6	1125	chrX	21086092	intergenic	not near genes	chrX	21086654	intergenic	not near genes	chrX	21087217	intergenic	not near genes	chrX_6_21085001	chrX_21085001	RG4N_1-HE
5184	chrX	21156778	21156783	chrX	21157349	21157353	Rt1b	5	570	11.0	6.5	8.8	0.5	575	chrX	21156778	intergenic	not near genes	chrX	21157066	intergenic	not near genes	chrX	21157353	intergenic	not near genes	chrX_5_21155001	chrX_21155001	RG4N_1-HE
5194	chrX	21254630	21254733	chrX	21255287	21255348	hopper2	37	647	3.5	11.5	7.5	4.4	718	chrX	21254630	intron	CG32521 -	chrX	21254989	intron	CG32521 -	chrX	21255348	intron	CG32521 -	chrX_37_21250001	chrX_21250001	RG4N_1-HE
5208	chrX	21458636	21458718	chrX	21464142	21464225	Ivk	31	5506	13.0	9.5	11.2	2.5	5589	chrX	21458636	intergenic	not near genes	chrX	21461430	intergenic	not near genes	chrX	21464225	intergenic	not near genes	chrX_31_21460001	chrX_21460001	RG4N_1-HE
5209	chrX	21474374	21474435	chrX	21474819	21474858	1731	25	440	9.0	9.0	9.0	2.5	484	chrX	21474374	intergenic	not near genes	chrX	21474616	intergenic	not near genes	chrX	21474858	intergenic	not near genes	chrX_25_21470001	chrX_21470001	RG4N_1-HE
5219	chrX	21595521	21595553	chrX	21598656	21598688	micropia	9	3131	5.0	2.5	3.8	1.9	3167	chrX	21595521	intergenic	not near genes	chrX	21597104	intergenic	not near genes	chrX	21598688	intergenic	not near genes	chrX_9_21595001	chrX_21595001	RG4N_1-HE
5227	chrX	22522570	22522647	chrX	22525459	22525537	NOF	11	2885	5.5	7.0	6.2	1.5	2967	chrX	22522570	intron	CG17600 +	chrX	22524054	intron	CG17600 +	chrX	22525537	intron	CG17600 +	chrX_11_22520001	chrX_22520001	RG4N_1-HE
5238	chrX	22644208	22644227	chrX	22644840	22644853	jockey	13	628	0.0	0.0	0.0	13.0	645	chrX	22644208	intergenic	not near genes	chrX	22644530	intergenic	not near genes	chrX	22644853	intergenic	not near genes	chrX_13_22640001	chrX_22640001	RG4N_1-HE
5240	chrX	22681412	22681476	chrX	22688941	22688987	HMS-Beagle2	55	7523	48.5	22.0	35.2	1.5	7575	chrX	22681412	intron	CR44997 +	chrX	22685200	intron	CR44997 +	chrX	22688987	intron	CR44997 +	chrX_55_22685001	chrX_22685001	RG4N_1-HE
5245	chrX	22697442	22697477	chrX	22701810	22701845	Juan	31	4367	39.0	27.5	33.2	0.9	4403	chrX	22697442	intron	CR44997 +	chrX	22699644	intron	CR44997 +	chrX	22701845	intron	CR44997 +	chrX_31_22695001	chrX_22695001	RG4N_1-HE
5246	chrX	22697478	22697507	chrX	22701795	22701875	Juan	32	4366	25.5	20.0	22.8	1.3	4397	chrX	22697478	intron	CR44997 +	chrX	22699676	intron	CR44997 +	chrX	22701875	intron	CR44997 +	chrX_32_22695001	chrX_22695001	RG4N_1-HE
5250	chrX	22771481	22771489	chrX	22774842	22774851	297	4	3361	8.0	8.0	8.0	0.4	3370	chrX	22771481	intron	CR44997 +	chrX	22773166	intron	CR44997 +	chrX	22774851	intron	CR44997 +	chrX_4_22770001	chrX_22770001	RG4N_1-HE
5251	chrX	22771490	22771516	chrX	22774840	22774878	297	8	3356	8.0	8.0	8.0	0.9	3388	chrX	22771490	intron	CR44997 +	chrX	22773184	intron	CR44997 +	chrX	22774878	intron	CR44997 +	chrX_8_22770001	chrX_22770001	RG4N_1-HE
5253	chrX	22811947	22812003	chrX	22816784	22816847	F-element	28	4843	18.0	14.0	16.0	1.6	4900	chrX	22811947	intergenic	CG12446 -	chrX	22814397	intergenic	not near genes	chrX	22816847	intergenic	not near genes	chrX_28_22810001	chrX_22810001	RG4N_1-HE
5263	chrX	22987057	22987121	chrX	22989781	22989851	Burdock	9	2724	2.0	5.0	3.5	2.0	2794	chrX	22987057	intron,intron	stnA -,stnB -	chrX	22988454	intron,intron	stnA -,stnB -	chrX	22989851	intron,intron	stnA -,stnB -	chrX_9_22985001	chrX_22985001	RG4N_1-HE
5265	chrX	22996245	22996332	chrX	23003549	23003630	roo	25	7302	6.5	6.5	6.5	3.3	7385	chrX	22996245	intron,intron	stnA -,stnB -	chrX	22999938	intron,intron	stnA -,stnB -	chrX	23003630	intron,intron	stnA -,stnB -	chrX_25_22995001	chrX_22995001	RG4N_1-HE
5266	chrX	23036324	23036404	chrX	23037795	23037876	pogo	12	1471	4.5	4.5	4.5	2.2	1552	chrX	23036324	intron	CG12061 +	chrX	23037100	intron	CG12061 +	chrX	23037876	intron	CG12061 +	chrX_12_23035001	chrX_23035001	RG4N_1-HE