SV#	Chr_5p	Chr_coord_5p_start	Chr_coord_5p_end	Chr_3p	Chr_coord_3p_start	Chr_coord_3p_end	repName	Reads_collapsed	avg_del_len	RefGen_3prime	Refgen_5prime	RefGen_Avg	Coverage_Ratio	size	Chr_5p	Chr_coord_5p	classification_5p	comment_5p	Chr_mid	Chr_coord_mid	classification_mid	comment_mid	Chr_3p	Chr_coord_3p	classification_3p	comment_3p	depletion_code	loci_code	libname
1	chr2L	47458	47491	chr2L	52564	52597	jockey	17	5106	11.0	5.0	8.0	1.9	5139	chr2L	47458	intron	Cda5 -	chr2L	50028	intron	Cda5 -	chr2L	52597	intron	Cda5 -	chr2L_17_50001	chr2L_50001	RC5_1-HE
6	chr2L	347886	347916	chr2L	355386	355417	blood	10	7501	0.5	2.0	1.2	4.5	7531	chr2L	347886	3` UTR	Plc21C +	chr2L	351652	intron	Plc21C +	chr2L	355417	3` UTR	Plc21C +	chr2L_10_350001	chr2L_350001	RC5_1-HE
12	chr2L	686916	686932	chr2L	695956	695973	roo	6	9039	0.5	5.0	2.8	1.6	9057	chr2L	686916	intron	ds -	chr2L	691444	intron	ds -	chr2L	695973	intron	ds -	chr2L_6_690001	chr2L_690001	RC5_1-HE
16	chr2L	770463	770492	chr2L	772245	772274	Bari1	6	1781	2.5	3.0	2.8	1.6	1811	chr2L	770463	intergenic	not near genes	chr2L	771368	intergenic	not near genes	chr2L	772274	intergenic	CR44614 +	chr2L_6_770001	chr2L_770001	RC5_1-HE
19	chr2L	976878	976909	chr2L	984515	984546	roo	10	7637	2.0	3.5	2.8	2.6	7668	chr2L	976878	intergenic	not near genes	chr2L	980712	intergenic	not near genes	chr2L	984546	intergenic	not near genes	chr2L_10_980001	chr2L_980001	RC5_1-HE
21	chr2L	1220132	1220136	chr2L	1227599	1227603	blood	4	7467	2.5	1.0	1.8	1.4	7471	chr2L	1220132	intron	CG42329 +	chr2L	1223868	intron	CG42329 +	chr2L	1227603	intron	CG42329 +	chr2L_4_1220001	chr2L_1220001	RC5_1-HE
35	chr2L	1570687	1570696	chr2L	1573560	1573569	F-element	6	2873	13.0	9.5	11.2	0.5	2882	chr2L	1570687	intron	haf +	chr2L	1572128	intron	haf +	chr2L	1573569	intron	haf +	chr2L_6_1570001	chr2L_1570001	RC5_1-HE
36	chr2L	1570697	1570717	chr2L	1573556	1573590	F-element	19	2872	5.5	8.5	7.0	2.4	2893	chr2L	1570697	intron	haf +	chr2L	1572144	intron	haf +	chr2L	1573590	intron	haf +	chr2L_19_1570001	chr2L_1570001	RC5_1-HE
41	chr2L	1678984	1679008	chr2L	1686450	1686474	blood	13	7466	7.0	9.5	8.2	1.4	7490	chr2L	1678984	intron	chinmo +	chr2L	1682729	intron	chinmo +	chr2L	1686474	intron	chinmo +	chr2L_13_1680001	chr2L_1680001	RC5_1-HE
43	chr2L	1711353	1711389	chr2L	1711678	1711714	mdg3	4	325	0.5	1.5	1.0	2.0	361	chr2L	1711353	3` UTR,3` UTR	mRpL48 +,frtz -	chr2L	1711534	3` UTR	frtz -	chr2L	1711714	3` UTR	frtz -	chr2L_4_1710001	chr2L_1710001	RC5_1-HE
53	chr2L	2100377	2100403	chr2L	2109529	2109555	roo	12	9152	5.0	5.5	5.2	1.9	9178	chr2L	2100377	intron	dpr3 -	chr2L	2104966	intron	dpr3 -	chr2L	2109555	intron	dpr3 -	chr2L_12_2100001	chr2L_2100001	RC5_1-HE
54	chr2L	2112120	2112142	chr2L	2119776	2119805	opus	10	7661	1.5	5.5	3.5	2.2	7685	chr2L	2112120	intergenic	not near genes	chr2L	2115962	intergenic	not near genes	chr2L	2119805	intergenic	not near genes	chr2L_10_2115001	chr2L_2115001	RC5_1-HE
76	chr2L	2772609	2772624	chr2L	2779194	2779209	297	4	6583	0.5	3.5	2.0	1.3	6600	chr2L	2772609	3` UTR	Syt1 -	chr2L	2775909	intron	Syt1 -	chr2L	2779209	3` UTR	Syt1 -	chr2L_4_2775001	chr2L_2775001	RC5_1-HE
79	chr2L	2933300	2933326	chr2L	2935478	2935504	pogo	22	2178	7.5	7.5	7.5	2.6	2204	chr2L	2933300	intron	lilli +	chr2L	2934402	intron	lilli +	chr2L	2935504	intron	lilli +	chr2L_22_2930001	chr2L_2930001	RC5_1-HE
80	chr2L	3073030	3073064	chr2L	3078234	3078268	copia	9	5204	2.0	0.5	1.2	4.1	5238	chr2L	3073030	intron	toc -	chr2L	3075649	intron	toc -	chr2L	3078268	intron	toc -	chr2L_9_3075001	chr2L_3075001	RC5_1-HE
84	chr2L	3251493	3251525	chr2L	3259059	3259091	springer	10	7565	2.0	2.5	2.2	3.1	7598	chr2L	3251493	intergenic	not near genes	chr2L	3255292	intergenic	not near genes	chr2L	3259091	intergenic	not near genes	chr2L_10_3255001	chr2L_3255001	RC5_1-HE
87	chr2L	3388600	3388631	chr2L	3388842	3388873	pogo	11	242	3.5	1.5	2.5	3.1	273	chr2L	3388600	intergenic	CG42460 -	chr2L	3388736	intergenic	CG42460 -	chr2L	3388873	intergenic	CG42460 -,CR44791 +	chr2L_11_3385001	chr2L_3385001	RC5_1-HE
95	chr2L	3649787	3649818	chr2L	3654990	3655022	copia	7	5204	3.0	0.5	1.8	2.5	5235	chr2L	3649787	intron	for -	chr2L	3652404	intron	for -	chr2L	3655022	intron	for -	chr2L_7_3650001	chr2L_3650001	RC5_1-HE
108	chr2L	4066041	4066064	chr2L	4068863	4068890	Juan	8	2826	6.5	4.5	5.5	1.2	2849	chr2L	4066041	intron	ed +	chr2L	4067466	intron	ed +	chr2L	4068890	intron	ed +	chr2L_8_4065001	chr2L_4065001	RC5_1-HE
116	chr2L	4601701	4601736	chr2L	4609143	4609178	mdg1	14	7442	3.0	3.0	3.0	3.5	7477	chr2L	4601701	intron	dp -	chr2L	4605440	intron	dp -	chr2L	4609178	intron	dp -	chr2L_14_4605001	chr2L_4605001	RC5_1-HE
139	chr2L	5827709	5827740	chr2L	5836718	5836749	roo	9	9007	4.0	5.0	4.5	1.6	9040	chr2L	5827709	intron	TrissinR +	chr2L	5832229	intron	TrissinR +	chr2L	5836749	intron	TrissinR +	chr2L_9_5830001	chr2L_5830001	RC5_1-HE
155	chr2L	6876784	6876807	chr2L	6882964	6882983	diver	9	6185	5.5	3.0	4.2	1.7	6199	chr2L	6876784	intron	Nlg2 +	chr2L	6879884	intron	Nlg2 +	chr2L	6882983	intron	Nlg2 +	chr2L_9_6875001	chr2L_6875001	RC5_1-HE
164	chr2L	7343324	7343359	chr2L	7350441	7350468	roo	21	7117	7.0	5.5	6.2	2.9	7144	chr2L	7343324	intron	Wnt6 +	chr2L	7346896	intron	Wnt6 +	chr2L	7350468	intron	Wnt6 +	chr2L_21_7345001	chr2L_7345001	RC5_1-HE
170	chr2L	7579189	7579208	chr2L	7579381	7579400	BS	7	191	3.5	0.5	2.0	2.3	211	chr2L	7579189	intergenic	RapGAP1 -	chr2L	7579294	intergenic	RapGAP1 -	chr2L	7579400	intergenic	RapGAP1 -	chr2L_7_7575001	chr2L_7575001	RC5_1-HE
192	chr2L	8452424	8452453	chr2L	8461596	8461625	roo	11	9172	1.0	5.0	3.0	2.8	9201	chr2L	8452424	intron	fu12 -	chr2L	8457024	intron	fu12 -	chr2L	8461625	intron	fu12 -	chr2L_11_8455001	chr2L_8455001	RC5_1-HE
202	chr2L	8723119	8723146	chr2L	8731497	8731524	Tirant	4	8378	2.0	3.0	2.5	1.1	8405	chr2L	8723119	intron	raw -	chr2L	8727322	intron	raw -	chr2L	8731524	intron	raw -	chr2L_4_8725001	chr2L_8725001	RC5_1-HE
209	chr2L	9000281	9000306	chr2L	9007792	9007817	roo	7	7511	4.0	4.5	4.2	1.3	7536	chr2L	9000281	intergenic	Try29F +	chr2L	9004049	intergenic	not near genes	chr2L	9007817	intergenic	not near genes	chr2L_7_9000001	chr2L_9000001	RC5_1-HE
215	chr2L	9217992	9217999	chr2L	9222780	9222787	Doc	6	4788	6.5	0.0	3.2	1.4	4795	chr2L	9217992	intron	tai +	chr2L	9220390	intron	tai +	chr2L	9222787	intron	tai +	chr2L_6_9220001	chr2L_9220001	RC5_1-HE
223	chr2L	9393496	9393528	chr2L	9396464	9396496	jockey	15	2967	6.0	5.0	5.5	2.3	3000	chr2L	9393496	intron	Shawl -	chr2L	9394996	intron	Shawl -	chr2L	9396496	intron	Shawl -	chr2L_15_9390001	chr2L_9390001	RC5_1-HE
233	chr2L	9770762	9770787	chr2L	9770875	9770900	1360	5	112	2.5	1.0	1.8	1.8	138	chr2L	9770762	intron	ppk18 -	chr2L	9770831	intron	ppk18 -	chr2L	9770900	exon	ppk18 -	chr2L_5_9770001	chr2L_9770001	RC5_1-HE
235	chr2L	9973742	9973755	chr2L	9980850	9980875	HMS-Beagle	8	7118	3.5	5.0	4.2	1.5	7133	chr2L	9973742	intergenic	not near genes	chr2L	9977308	intergenic	not near genes	chr2L	9980875	intergenic	not near genes	chr2L_8_9975001	chr2L_9975001	RC5_1-HE
240	chr2L	10156320	10156354	chr2L	10163791	10163825	blood	10	7470	3.0	4.0	3.5	2.2	7505	chr2L	10156320	intron,3` UTR	CG44153 -,CG4839 +	chr2L	10160072	intron	CG44153 -	chr2L	10163825	intron	CG44153 -	chr2L_10_10160001	chr2L_10160001	RC5_1-HE
250	chr2L	10592841	10592873	chr2L	10600504	10600536	opus	13	7663	1.5	4.5	3.0	3.2	7695	chr2L	10592841	intron	Trim9 +	chr2L	10596688	intron	Trim9 +	chr2L	10600536	intron	Trim9 +	chr2L_13_10595001	chr2L_10595001	RC5_1-HE
259	chr2L	10946951	10946977	chr2L	10956167	10956193	roo	19	9215	4.5	11.0	7.8	2.2	9242	chr2L	10946951	intron	dpr2 -	chr2L	10951572	intron	dpr2 -	chr2L	10956193	intron	dpr2 -	chr2L_19_10950001	chr2L_10950001	RC5_1-HE
272	chr2L	11540594	11540611	chr2L	11547987	11548014	Tabor	12	7401	7.0	5.0	6.0	1.7	7420	chr2L	11540594	intergenic	not near genes	chr2L	11544304	intergenic	not near genes	chr2L	11548014	intergenic	not near genes	chr2L_12_11540001	chr2L_11540001	RC5_1-HE
274	chr2L	11563633	11563651	chr2L	11568838	11568856	copia	7	5205	3.5	1.0	2.2	2.2	5223	chr2L	11563633	intergenic	not near genes	chr2L	11566244	intergenic	not near genes	chr2L	11568856	intergenic	not near genes	chr2L_7_11565001	chr2L_11565001	RC5_1-HE
276	chr2L	11713505	11713528	chr2L	11720974	11720997	blood	5	7469	4.0	2.0	3.0	1.2	7492	chr2L	11713505	intergenic	not near genes	chr2L	11717251	intergenic	not near genes	chr2L	11720997	intergenic	CR44143 +	chr2L_5_11715001	chr2L_11715001	RC5_1-HE
277	chr2L	11713535	11713539	chr2L	11720973	11721008	blood	5	7463	1.5	2.0	1.8	1.8	7473	chr2L	11713535	intergenic	not near genes	chr2L	11717272	intergenic	not near genes	chr2L	11721008	intergenic	CR44143 +	chr2L_5_11715001	chr2L_11715001	RC5_1-HE
297	chr2L	12558318	12558353	chr2L	12565447	12565483	HMS-Beagle	13	7130	4.0	6.0	5.0	2.2	7165	chr2L	12558318	intergenic	not near genes	chr2L	12561900	intergenic	not near genes	chr2L	12565483	intergenic	not near genes	chr2L_13_12560001	chr2L_12560001	RC5_1-HE
305	chr2L	12728920	12728941	chr2L	12729164	12729185	pogo	5	244	3.0	3.5	3.2	1.2	265	chr2L	12728920	intron	MRP +	chr2L	12729052	intron	MRP +	chr2L	12729185	exon	MRP +	chr2L_5_12725001	chr2L_12725001	RC5_1-HE
306	chr2L	12731059	12731089	chr2L	12735827	12735857	F-element	6	4768	3.5	3.0	3.2	1.4	4798	chr2L	12731059	intron	MRP +	chr2L	12733458	intron	MRP +	chr2L	12735857	intron	MRP +	chr2L_6_12730001	chr2L_12730001	RC5_1-HE
307	chr2L	12739179	12739201	chr2L	12743961	12743983	Doc	8	4782	1.0	9.0	5.0	1.3	4804	chr2L	12739179	exon	MRP +	chr2L	12741581	intron	MRP +	chr2L	12743983	exon	MRP +	chr2L_8_12740001	chr2L_12740001	RC5_1-HE
308	chr2L	12763863	12763872	chr2L	12764064	12764073	BS	9	201	0.5	7.0	3.8	1.9	210	chr2L	12763863	intergenic	not near genes	chr2L	12763968	intergenic	not near genes	chr2L	12764073	intergenic	not near genes	chr2L_9_12760001	chr2L_12760001	RC5_1-HE
310	chr2L	12781798	12781812	chr2L	12789249	12789263	Quasimodo	9	7451	18.0	19.0	18.5	0.5	7465	chr2L	12781798	intergenic	not near genes	chr2L	12785530	intergenic	not near genes	chr2L	12789263	intergenic	not near genes	chr2L_9_12785001	chr2L_12785001	RC5_1-HE
311	chr2L	12791602	12791633	chr2L	12795278	12795309	F-element	22	3675	15.5	10.5	13.0	1.6	3707	chr2L	12791602	intergenic	not near genes	chr2L	12793456	intergenic	not near genes	chr2L	12795309	intergenic	not near genes	chr2L_22_12790001	chr2L_12790001	RC5_1-HE
314	chr2L	12861693	12861731	chr2L	12863161	12863192	hobo	22	1466	1.5	3.0	2.2	6.9	1499	chr2L	12861693	intergenic	not near genes	chr2L	12862442	intergenic	not near genes	chr2L	12863192	intergenic	not near genes	chr2L_22_12860001	chr2L_12860001	RC5_1-HE
315	chr2L	12894015	12894053	chr2L	12895483	12895521	hobo	15	1464	1.0	5.5	3.2	3.6	1506	chr2L	12894015	intergenic	not near genes	chr2L	12894768	intergenic	not near genes	chr2L	12895521	intergenic	not near genes	chr2L_15_12890001	chr2L_12890001	RC5_1-HE
317	chr2L	12933847	12933880	chr2L	12941315	12941348	blood	14	7468	4.0	4.0	4.0	2.8	7501	chr2L	12933847	intergenic	not near genes	chr2L	12937598	intergenic	not near genes	chr2L	12941348	intergenic	not near genes	chr2L_14_12935001	chr2L_12935001	RC5_1-HE
319	chr2L	13036246	13036272	chr2L	13036489	13036514	X-element	11	242	2.0	5.5	3.8	2.3	268	chr2L	13036246	intron	CG9932 -	chr2L	13036380	intron	CG9932 -	chr2L	13036514	intron	CG9932 -	chr2L_11_13035001	chr2L_13035001	RC5_1-HE
325	chr2L	13241959	13241983	chr2L	13244344	13244351	BS	8	2382	2.0	2.0	2.0	2.7	2392	chr2L	13241959	5` UTR	CR45330 +	chr2L	13243155	intron	CR45330 +	chr2L	13244351	5` UTR	CR45330 +	chr2L_8_13240001	chr2L_13240001	RC5_1-HE
331	chr2L	13405656	13405683	chr2L	13410454	13410481	Doc	4	4798	2.0	3.5	2.8	1.1	4825	chr2L	13405656	exon	CG7110 +	chr2L	13408068	intron	CG7110 +	chr2L	13410481	intron	CG7110 +	chr2L_4_13405001	chr2L_13405001	RC5_1-HE
332	chr2L	13449461	13449490	chr2L	13456898	13456927	Quasimodo	7	7437	2.5	2.5	2.5	2.0	7466	chr2L	13449461	intron,5` UTR	CG42784 +,Hsp60D -	chr2L	13453194	intron	CG42784 +	chr2L	13456927	intron	CG42784 +	chr2L_7_13450001	chr2L_13450001	RC5_1-HE
333	chr2L	13481446	13481481	chr2L	13482054	13482093	jockey	10	612	6.5	6.0	6.2	1.4	647	chr2L	13481446	intron	CG42784 +	chr2L	13481770	intron	CG42784 +	chr2L	13482093	intron	CG42784 +	chr2L_10_13480001	chr2L_13480001	RC5_1-HE
343	chr2L	13761802	13761808	chr2L	13762914	13762920	Doc	5	1111	6.0	1.5	3.8	1.0	1118	chr2L	13761802	intron	TM9SF4 +	chr2L	13762361	intron	TM9SF4 +	chr2L	13762920	intron	TM9SF4 +	chr2L_5_13760001	chr2L_13760001	RC5_1-HE
344	chr2L	13761809	13761837	chr2L	13762908	13762923	Doc	7	1098	3.5	1.0	2.2	2.2	1114	chr2L	13761809	intron	TM9SF4 +	chr2L	13762366	intron	TM9SF4 +	chr2L	13762923	intron	TM9SF4 +	chr2L_7_13760001	chr2L_13760001	RC5_1-HE
348	chr2L	13853083	13853118	chr2L	13862234	13862269	roo	17	9151	6.5	5.0	5.8	2.5	9186	chr2L	13853083	intron	CenG1A +	chr2L	13857676	intron	CenG1A +	chr2L	13862269	intron	CenG1A +	chr2L_17_13855001	chr2L_13855001	RC5_1-HE
362	chr2L	14465584	14465598	chr2L	14469048	14469062	hopper2	7	3464	4.0	2.5	3.2	1.7	3478	chr2L	14465584	intergenic	not near genes	chr2L	14467323	intergenic	not near genes	chr2L	14469062	intergenic	not near genes	chr2L_7_14465001	chr2L_14465001	RC5_1-HE
368	chr2L	14803876	14803910	chr2L	14809080	14809114	copia	14	5202	2.0	8.0	5.0	2.3	5238	chr2L	14803876	intergenic	not near genes	chr2L	14806495	intergenic	not near genes	chr2L	14809114	intergenic	not near genes	chr2L_14_14805001	chr2L_14805001	RC5_1-HE
373	chr2L	14889950	14889987	chr2L	14890376	14890413	jockey	24	426	5.0	2.5	3.8	5.0	463	chr2L	14889950	intergenic	not near genes	chr2L	14890182	intergenic	not near genes	chr2L	14890413	intergenic	not near genes	chr2L_24_14890001	chr2L_14890001	RC5_1-HE
380	chr2L	14984380	14984403	chr2L	14991979	14992004	opus	4	7600	4.0	3.0	3.5	0.9	7624	chr2L	14984380	intron	mol -	chr2L	14988192	intron	mol -	chr2L	14992004	intron	mol -	chr2L_4_14985001	chr2L_14985001	RC5_1-HE
390	chr2L	15446056	15446079	chr2L	15453526	15453549	blood	6	7470	3.5	6.0	4.8	1.0	7493	chr2L	15446056	intergenic	not near genes	chr2L	15449802	intergenic	not near genes	chr2L	15453549	intergenic	not near genes	chr2L_6_15445001	chr2L_15445001	RC5_1-HE
400	chr2L	15956026	15956058	chr2L	15957494	15957526	hobo	11	1468	4.5	5.5	5.0	1.8	1500	chr2L	15956026	intron	beat-Ib -	chr2L	15956776	intron	beat-Ib -	chr2L	15957526	intron	beat-Ib -	chr2L_11_15955001	chr2L_15955001	RC5_1-HE
407	chr2L	16141171	16141194	chr2L	16146369	16146402	copia	16	5207	0.0	4.0	2.0	5.3	5231	chr2L	16141171	intergenic	not near genes	chr2L	16143786	intergenic	not near genes	chr2L	16146402	intergenic	not near genes	chr2L_16_16140001	chr2L_16140001	RC5_1-HE
409	chr2L	16153741	16153749	chr2L	16160810	16160818	297	7	7069	4.5	5.5	5.0	1.2	7077	chr2L	16153741	intergenic	not near genes	chr2L	16157280	intergenic	not near genes	chr2L	16160818	intergenic	not near genes	chr2L_7_16155001	chr2L_16155001	RC5_1-HE
414	chr2L	16280255	16280277	chr2L	16281427	16281449	1360	6	1171	1.5	1.5	1.5	2.4	1194	chr2L	16280255	intron	crp -	chr2L	16280852	intron	crp -	chr2L	16281449	intron	crp -	chr2L_6_16280001	chr2L_16280001	RC5_1-HE
422	chr2L	16511961	16511991	chr2L	16519084	16519114	HMS-Beagle	10	7123	1.5	1.5	1.5	4.0	7153	chr2L	16511961	intron	CG5953 -	chr2L	16515538	intron	CG5953 -	chr2L	16519114	intron	CG5953 -	chr2L_10_16515001	chr2L_16515001	RC5_1-HE
431	chr2L	16958100	16958136	chr2L	16962889	16962925	Doc	25	4789	7.5	5.5	6.5	3.3	4825	chr2L	16958100	intergenic	not near genes	chr2L	16960512	intergenic	not near genes	chr2L	16962925	intergenic	not near genes	chr2L_25_16960001	chr2L_16960001	RC5_1-HE
442	chr2L	17167562	17167591	chr2L	17167804	17167832	pogo	9	242	3.5	6.5	5.0	1.5	270	chr2L	17167562	intron,intron	CG34106 +,beat-IIIa +	chr2L	17167697	intron,intron	CG34106 +,beat-IIIa +	chr2L	17167832	intron,intron	CG34106 +,beat-IIIa +	chr2L_9_17165001	chr2L_17165001	RC5_1-HE
443	chr2L	17199159	17199192	chr2L	17200627	17200660	hobo	17	1468	5.5	4.0	4.8	2.9	1501	chr2L	17199159	intron	beat-IIIc -	chr2L	17199910	intron	beat-IIIc -	chr2L	17200660	intron	beat-IIIc -	chr2L_17_17195001	chr2L_17195001	RC5_1-HE
445	chr2L	17273188	17273225	chr2L	17277972	17278009	F-element	25	4782	3.5	4.0	3.8	5.2	4821	chr2L	17273188	intergenic	not near genes	chr2L	17275598	intergenic	not near genes	chr2L	17278009	intergenic	not near genes	chr2L_25_17275001	chr2L_17275001	RC5_1-HE
454	chr2L	17687515	17687522	chr2L	17692261	17692268	F-element	11	4746	5.5	7.0	6.2	1.5	4753	chr2L	17687515	intron	CadN -	chr2L	17689892	intron	CadN -	chr2L	17692268	intron	CadN -	chr2L_11_17685001	chr2L_17685001	RC5_1-HE
457	chr2L	17727867	17727879	chr2L	17729335	17729347	hobo	7	1468	5.5	7.5	6.5	0.9	1480	chr2L	17727867	intron	CadN -	chr2L	17728607	intron	CadN -	chr2L	17729347	intron	CadN -	chr2L_7_17725001	chr2L_17725001	RC5_1-HE
459	chr2L	17819922	17819948	chr2L	17825126	17825152	copia	6	5204	6.5	4.0	5.2	1.0	5230	chr2L	17819922	intron	CadN2 -	chr2L	17822537	intron	CadN2 -	chr2L	17825152	intron	CadN2 -	chr2L_6_17820001	chr2L_17820001	RC5_1-HE
462	chr2L	17911956	17911988	chr2L	17914135	17914167	pogo	7	2177	3.5	5.0	4.2	1.3	2211	chr2L	17911956	intergenic	not near genes	chr2L	17913062	intergenic	not near genes	chr2L	17914167	intergenic	CG43271 -	chr2L_7_17910001	chr2L_17910001	RC5_1-HE
464	chr2L	17951942	17951979	chr2L	17953410	17953447	hobo	10	1467	6.0	6.5	6.2	1.4	1505	chr2L	17951942	intergenic	CR44398 -,CR44397 -	chr2L	17952694	intergenic	not near genes	chr2L	17953447	intergenic	not near genes	chr2L_10_17950001	chr2L_17950001	RC5_1-HE
465	chr2L	18051873	18051908	chr2L	18061020	18061035	roo	13	9146	1.5	1.5	1.5	5.2	9162	chr2L	18051873	intron	rdo +	chr2L	18056454	intron	rdo +	chr2L	18061035	intron	rdo +	chr2L_13_18055001	chr2L_18055001	RC5_1-HE
474	chr2L	18408025	18408055	chr2L	18412810	18412839	Doc	19	4785	6.5	0.0	3.2	4.5	4814	chr2L	18408025	intergenic	not near genes	chr2L	18410432	intergenic	not near genes	chr2L	18412839	intergenic	not near genes	chr2L_19_18410001	chr2L_18410001	RC5_1-HE
494	chr2L	19147367	19147400	chr2L	19154403	19154436	297	11	7036	1.0	4.5	2.8	2.9	7069	chr2L	19147367	intron	brat +	chr2L	19150902	intron	brat +	chr2L	19154436	intron	brat +	chr2L_11_19150001	chr2L_19150001	RC5_1-HE
496	chr2L	19345016	19345050	chr2L	19357226	19357257	blood	16	12210	1.5	5.0	3.2	3.8	12241	chr2L	19345016	intron	dnt -	chr2L	19351136	intron	dnt -	chr2L	19357257	intron	dnt -	chr2L_16_19350001	chr2L_19350001	RC5_1-HE
507	chr2L	19620088	19620131	chr2L	19621078	19621121	jockey	33	987	8.5	4.0	6.2	4.6	1033	chr2L	19620088	intron	Lar +	chr2L	19620604	intron	Lar +	chr2L	19621121	intron	Lar +	chr2L_33_19620001	chr2L_19620001	RC5_1-HE
509	chr2L	19652568	19652601	chr2L	19674005	19674038	opus	16	21437	8.0	7.5	7.8	1.8	21470	chr2L	19652568	intron	Lar +	chr2L	19663303	intron	Lar +	chr2L	19674038	intron	Lar +	chr2L_16_19660001	chr2L_19660001	RC5_1-HE
510	chr2L	19703537	19703570	chr2L	19712674	19712707	roo	18	9137	5.5	8.0	6.8	2.3	9170	chr2L	19703537	intron	Lar +	chr2L	19708122	intron	Lar +	chr2L	19712707	intron	Lar +	chr2L_18_19705001	chr2L_19705001	RC5_1-HE
511	chr2L	19737354	19737385	chr2L	19740824	19740841	1360	7	3466	5.0	4.5	4.8	1.2	3487	chr2L	19737354	intergenic	Nf-YB +	chr2L	19739098	intergenic	not near genes	chr2L	19740841	intergenic	not near genes	chr2L_7_19735001	chr2L_19735001	RC5_1-HE
512	chr2L	19762822	19762836	chr2L	19763065	19763079	pogo	5	242	3.5	4.0	3.8	1.0	257	chr2L	19762822	intron	fbp -	chr2L	19762950	intron	fbp -	chr2L	19763079	intron	fbp -	chr2L_5_19760001	chr2L_19760001	RC5_1-HE
517	chr2L	20005888	20005902	chr2L	20010965	20010979	flea	6	5077	2.5	8.5	5.5	0.9	5091	chr2L	20005888	intron	CG43861 -	chr2L	20008434	intron	CG43861 -	chr2L	20010979	intron	CG43861 -	chr2L_6_20005001	chr2L_20005001	RC5_1-HE
523	chr2L	20272113	20272143	chr2L	20282825	20282855	copia	10	10712	3.5	4.5	4.0	2.0	10742	chr2L	20272113	intergenic	not near genes	chr2L	20277484	intergenic	not near genes	chr2L	20282855	intergenic	not near genes	chr2L_10_20275001	chr2L_20275001	RC5_1-HE
526	chr2L	20303162	20303193	chr2L	20310631	20310662	blood	9	7469	0.5	1.0	0.8	5.0	7500	chr2L	20303162	intergenic	not near genes	chr2L	20306912	intergenic	not near genes	chr2L	20310662	intergenic	not near genes	chr2L_9_20305001	chr2L_20305001	RC5_1-HE
535	chr2L	20568659	20568687	chr2L	20569050	20569078	X-element	19	391	3.5	2.5	3.0	4.8	419	chr2L	20568659	intron	CR45347 +	chr2L	20568868	intron	CR45347 +	chr2L	20569078	intron	CR45347 +	chr2L_19_20565001	chr2L_20565001	RC5_1-HE
536	chr2L	20576230	20576252	chr2L	20583699	20583720	blood	8	7469	4.5	10.5	7.5	0.9	7490	chr2L	20576230	intergenic	not near genes	chr2L	20579975	intergenic	not near genes	chr2L	20583720	3` UTR	CR44909 -	chr2L_8_20575001	chr2L_20575001	RC5_1-HE
546	chr2L	20976652	20976678	chr2L	20981462	20981494	X-element	9	4815	3.5	2.0	2.8	2.4	4842	chr2L	20976652	intron	CG42238 -	chr2L	20979073	intron	CG42238 -	chr2L	20981494	intron	CG42238 -	chr2L_9_20975001	chr2L_20975001	RC5_1-HE
549	chr2L	21020272	21020302	chr2L	21023950	21023979	NOF	14	3677	6.0	6.5	6.2	1.9	3707	chr2L	21020272	intron	CG42238 -	chr2L	21022126	intron	CG42238 -	chr2L	21023979	intron	CG42238 -	chr2L_14_21020001	chr2L_21020001	RC5_1-HE
550	chr2L	21041134	21041166	chr2L	21049396	21049426	Tirant	19	8261	3.5	5.0	4.2	3.7	8292	chr2L	21041134	intron	CG42238 -	chr2L	21045280	intron	CG42238 -	chr2L	21049426	intron	CG42238 -	chr2L_19_21045001	chr2L_21045001	RC5_1-HE
561	chr2L	21597026	21597063	chr2L	21604771	21604808	roo	10	7745	4.0	4.5	4.2	1.9	7782	chr2L	21597026	intergenic	not near genes	chr2L	21600917	intergenic	not near genes	chr2L	21604808	intergenic	not near genes	chr2L_10_21600001	chr2L_21600001	RC5_1-HE
563	chr2L	21653193	21653221	chr2L	21656498	21656526	invader4	10	3305	2.0	6.0	4.0	2.0	3333	chr2L	21653193	intergenic	not near genes	chr2L	21654860	intergenic	not near genes	chr2L	21656526	intergenic	not near genes	chr2L_10_21650001	chr2L_21650001	RC5_1-HE
564	chr2L	21691827	21691858	chr2L	21698298	21698329	Burdock	12	6471	3.5	0.0	1.8	4.3	6502	chr2L	21691827	intron	CG31619 +	chr2L	21695078	intron	CG31619 +	chr2L	21698329	intron	CG31619 +	chr2L_12_21695001	chr2L_21695001	RC5_1-HE
570	chr2L	21981681	21981713	chr2L	21990847	21990879	roo	26	9165	4.0	3.5	3.8	5.4	9198	chr2L	21981681	exon	CG2528 -	chr2L	21986280	intron	CG2528 -	chr2L	21990879	exon	CG2528 -	chr2L_26_21985001	chr2L_21985001	RC5_1-HE
577	chr2L	22258620	22258635	chr2L	22260741	22260761	G6	7	2125	6.5	4.0	5.2	1.1	2141	chr2L	22258620	intergenic	Tif-IA +	chr2L	22259690	intergenic	not near genes	chr2L	22260761	intergenic	not near genes	chr2L_7_22255001	chr2L_22255001	RC5_1-HE
579	chr2L	22548924	22548944	chr2L	22550150	22550170	1360	17	1226	0.0	8.0	4.0	3.4	1246	chr2L	22548924	intergenic	CG17490 +	chr2L	22549547	intergenic	not near genes	chr2L	22550170	intergenic	CG17493 +	chr2L_17_22545001	chr2L_22545001	RC5_1-HE
580	chr2L	22581978	22582001	chr2L	22583768	22583791	S-element	7	1788	3.5	4.0	3.8	1.5	1813	chr2L	22581978	intron	CG17494 +	chr2L	22582884	intron	CG17494 +	chr2L	22583791	intron	CG17494 +	chr2L_7_22580001	chr2L_22580001	RC5_1-HE
582	chr2L	22679800	22679824	chr2L	22684570	22684597	F-element	20	4773	8.0	14.5	11.2	1.6	4797	chr2L	22679800	intron	CG40006 -	chr2L	22682198	intron	CG40006 -	chr2L	22684597	intron	CG40006 -	chr2L_20_22680001	chr2L_22680001	RC5_1-HE
584	chr2L	22776427	22776450	chr2L	22778217	22778240	S-element	5	1790	3.0	4.5	3.8	1.0	1813	chr2L	22776427	intergenic	not near genes	chr2L	22777334	intergenic	not near genes	chr2L	22778240	intergenic	not near genes	chr2L_5_22775001	chr2L_22775001	RC5_1-HE
587	chr2R	469959	469982	chr2R	473201	473224	F-element	4	3242	3.0	12.0	7.5	0.5	3265	chr2R	469959	intergenic	not near genes	chr2R	471592	intergenic	not near genes	chr2R	473224	intergenic	not near genes	chr2R_4_470001	chr2R_470001	RC5_1-HE
588	chr2R	529320	529356	chr2R	537946	537982	Max-element	14	8626	2.5	3.5	3.0	3.5	8662	chr2R	529320	intron	CG40378 +	chr2R	533651	intron	CG40378 +	chr2R	537982	intron	CG40378 +	chr2R_14_530001	chr2R_530001	RC5_1-HE
589	chr2R	552752	552788	chr2R	553971	553993	1360	24	1214	6.5	7.5	7.0	3.0	1241	chr2R	552752	intron	CG40378 +	chr2R	553372	intron	CG40378 +	chr2R	553993	intron	CG40378 +	chr2R_24_550001	chr2R_550001	RC5_1-HE
591	chr2R	929801	929803	chr2R	4826134	4826136	HMS-Beagle	4	3896333	29.5	2.0	15.8	0.2	3896335	chr2R	929801	intron	CG40498 -	chr2R	2877968	intergenic	not near genes	chr2R	4826136	intergenic	not near genes	chr2R_4_2875001	chr2R_2875001	RC5_1-HE
593	chr2R	1082365	1082384	chr2R	1087142	1087161	Doc	4	4777	5.5	3.5	4.5	0.7	4796	chr2R	1082365	intron	rl +	chr2R	1084763	intron	rl +	chr2R	1087161	intron	rl +	chr2R_4_1080001	chr2R_1080001	RC5_1-HE
597	chr2R	2498984	2499018	chr2R	2508132	2508166	roo	21	9147	8.0	9.0	8.5	2.2	9182	chr2R	2498984	intron	MFS17 -	chr2R	2503575	intron	MFS17 -	chr2R	2508166	intron	MFS17 -	chr2R_21_2500001	chr2R_2500001	RC5_1-HE
599	chr2R	2591545	2591556	chr2R	2594222	2594233	roo	5	2677	0.0	15.0	7.5	0.6	2688	chr2R	2591545	intergenic	not near genes	chr2R	2592889	intergenic	not near genes	chr2R	2594233	intergenic	not near genes	chr2R_5_2590001	chr2R_2590001	RC5_1-HE
600	chr2R	2856600	2856624	chr2R	2857024	2857048	297	11	424	8.5	4.5	6.5	1.5	448	chr2R	2856600	intergenic	not near genes	chr2R	2856824	intergenic	not near genes	chr2R	2857048	intergenic	not near genes	chr2R_11_2855001	chr2R_2855001	RC5_1-HE
601	chr2R	2875381	2875392	chr2R	2878897	2878902	HMS-Beagle	4	3514	25.0	37.5	31.2	0.1	3521	chr2R	2875381	intergenic	not near genes	chr2R	2877142	intergenic	not near genes	chr2R	2878902	intergenic	not near genes	chr2R_4_2875001	chr2R_2875001	RC5_1-HE
604	chr2R	3532615	3532645	chr2R	3536059	3536089	Doc	9	3444	2.5	4.0	3.2	2.1	3474	chr2R	3532615	intergenic	not near genes	chr2R	3534352	intergenic	not near genes	chr2R	3536089	intergenic	not near genes	chr2R_9_3530001	chr2R_3530001	RC5_1-HE
608	chr2R	4622958	4622987	chr2R	4624112	4624147	1360	12	1159	3.0	7.0	5.0	2.0	1189	chr2R	4622958	intergenic	CR44101 -	chr2R	4623552	intergenic	not near genes	chr2R	4624147	intergenic	not near genes	chr2R_12_4620001	chr2R_4620001	RC5_1-HE
620	chr2R	5418002	5418023	chr2R	5420635	5420656	Burdock	5	2633	2.5	2.0	2.2	1.6	2654	chr2R	5418002	intron	laccase2 +	chr2R	5419329	intron	laccase2 +	chr2R	5420656	intron	laccase2 +	chr2R_5_5415001	chr2R_5415001	RC5_1-HE
627	chr2R	5543197	5543221	chr2R	5547282	5547306	invader1	10	4085	0.5	8.0	4.2	1.9	4109	chr2R	5543197	intron	CG30438 +	chr2R	5545252	intron	CG30438 +	chr2R	5547306	intron	CG30438 +	chr2R_10_5545001	chr2R_5545001	RC5_1-HE
630	chr2R	4284687	4284691	chr2R	5617505	5617509	Cr1a	7	1332818	70.0	30.0	50.0	0.1	1332822	chr2R	4284687	intergenic	not near genes	chr2R	4951098	intron	Ir41a +	chr2R	5617509	intergenic	not near genes	chr2R_7_4950001	chr2R_4950001	RC5_1-HE
631	chr2R	5869293	5869306	chr2R	5874374	5874386	flea	6	5081	6.5	2.5	4.5	1.1	5093	chr2R	5869293	intergenic	not near genes	chr2R	5871840	intergenic	not near genes	chr2R	5874386	intergenic	not near genes	chr2R_6_5870001	chr2R_5870001	RC5_1-HE
634	chr2R	5902156	5902186	chr2R	5909716	5909746	17.6	16	7560	5.5	8.0	6.8	2.1	7590	chr2R	5902156	intron	CG43366 +	chr2R	5905951	intron	CG43366 +	chr2R	5909746	intron	CG43366 +	chr2R_16_5905001	chr2R_5905001	RC5_1-HE
646	chr2R	6096710	6096752	chr2R	6101909	6101937	BS	7	5191	3.5	1.5	2.5	2.0	5227	chr2R	6096710	intron	EcR -	chr2R	6099324	intron	EcR -	chr2R	6101937	intron	EcR -	chr2R_7_6095001	chr2R_6095001	RC5_1-HE
649	chr2R	6494537	6494546	chr2R	6499300	6499309	F-element	5	4763	2.5	5.0	3.8	1.0	4772	chr2R	6494537	intergenic	not near genes	chr2R	6496923	intergenic	not near genes	chr2R	6499309	intergenic	not near genes	chr2R_5_6495001	chr2R_6495001	RC5_1-HE
651	chr2R	6579770	6579804	chr2R	6584857	6584891	flea	10	5087	3.0	5.0	4.0	2.0	5121	chr2R	6579770	intron	jing +	chr2R	6582330	intron	jing +	chr2R	6584891	intron	jing +	chr2R_10_6580001	chr2R_6580001	RC5_1-HE
653	chr2R	6622147	6622174	chr2R	6622620	6622647	invader1	7	473	2.0	2.0	2.0	2.3	500	chr2R	6622147	intergenic	not near genes	chr2R	6622397	intergenic	not near genes	chr2R	6622647	intergenic	not near genes	chr2R_7_6620001	chr2R_6620001	RC5_1-HE
661	chr2R	6952163	6952183	chr2R	6959744	6959764	opus	4	7581	3.5	4.0	3.8	0.8	7601	chr2R	6952163	intron,intron	mim -,CheB42c -	chr2R	6955964	intron,intron	mim -,CheB42c -	chr2R	6959764	intron,intron	mim -,CheB42c -	chr2R_4_6955001	chr2R_6955001	RC5_1-HE
665	chr2R	7196571	7196597	chr2R	7201347	7201373	F-element	9	4776	0.0	0.0	0.0	9.0	4802	chr2R	7196571	intron	pk +	chr2R	7198972	intron	pk +	chr2R	7201373	intron	pk +	chr2R_9_7195001	chr2R_7195001	RC5_1-HE
673	chr2R	7608406	7608423	chr2R	7613610	7613627	I-element	5	5204	2.0	0.5	1.2	2.3	5221	chr2R	7608406	intron	CG1358 -	chr2R	7611016	intron	CG1358 -	chr2R	7613627	intron	CG1358 -	chr2R_5_7610001	chr2R_7610001	RC5_1-HE
677	chr2R	7869190	7869208	chr2R	7873977	7873995	Doc	6	4787	5.0	6.5	5.8	0.9	4805	chr2R	7869190	intron	Dgk -	chr2R	7871592	intron	Dgk -	chr2R	7873995	intron	Dgk -	chr2R_6_7870001	chr2R_7870001	RC5_1-HE
683	chr2R	8330859	8330892	chr2R	8331346	8331379	roo	27	487	1.5	6.0	3.8	5.6	520	chr2R	8330859	intron	pdm3 +	chr2R	8331119	intron	pdm3 +	chr2R	8331379	intron	pdm3 +	chr2R_27_8330001	chr2R_8330001	RC5_1-HE
684	chr2R	8398211	8398243	chr2R	8402993	8403025	Doc	9	4779	5.0	4.0	4.5	1.6	4814	chr2R	8398211	intron	CG2121 -	chr2R	8400618	intron	CG2121 -	chr2R	8403025	intron	CG2121 -	chr2R_9_8400001	chr2R_8400001	RC5_1-HE
692	chr2R	8566030	8566064	chr2R	8566983	8567017	1360	8	953	0.5	2.5	1.5	3.2	987	chr2R	8566030	5` UTR	Cyp6a14 -	chr2R	8566524	5` UTR	Cyp6a14 -	chr2R	8567017	5` UTR	Cyp6a14 -	chr2R_8_8565001	chr2R_8565001	RC5_1-HE
696	chr2R	8722761	8722788	chr2R	8723003	8723030	pogo	13	242	2.0	2.5	2.2	4.1	269	chr2R	8722761	intron	CG14767 -	chr2R	8722896	intron	CG14767 -	chr2R	8723030	intron	CG14767 -	chr2R_13_8720001	chr2R_8720001	RC5_1-HE
697	chr2R	8777928	8777945	chr2R	8784133	8784150	diver	8	6205	2.0	5.0	3.5	1.8	6222	chr2R	8777928	intergenic	not near genes	chr2R	8781039	intergenic	not near genes	chr2R	8784150	intergenic	not near genes	chr2R_8_8780001	chr2R_8780001	RC5_1-HE
703	chr2R	9151307	9151327	chr2R	9157778	9157798	Burdock	4	6471	1.0	4.5	2.8	1.1	6491	chr2R	9151307	3` UTR	CG30345 +	chr2R	9154552	intergenic	not near genes	chr2R	9157798	intergenic	CG8008 -	chr2R_4_9150001	chr2R_9150001	RC5_1-HE
705	chr2R	9212692	9212726	chr2R	9213179	9213213	roo	7	487	1.0	4.0	2.5	2.0	521	chr2R	9212692	intergenic	CR45309 +	chr2R	9212952	intergenic	CR45309 +	chr2R	9213213	5` UTR	CR45309 +	chr2R_7_9210001	chr2R_9210001	RC5_1-HE
708	chr2R	9480074	9480105	chr2R	9490606	9490637	roo	7	10531	3.0	2.5	2.8	1.8	10563	chr2R	9480074	intergenic	not near genes	chr2R	9485356	intergenic	not near genes	chr2R	9490637	intergenic	not near genes	chr2R_7_9485001	chr2R_9485001	RC5_1-HE
713	chr2R	9726611	9726643	chr2R	9734165	9734197	17.6	12	7554	3.5	2.0	2.8	3.2	7586	chr2R	9726611	intron	sqa -	chr2R	9730404	intron	sqa -	chr2R	9734197	intron	sqa -	chr2R_12_9730001	chr2R_9730001	RC5_1-HE
714	chr2R	9945441	9945465	chr2R	9945637	9945662	BS	5	197	4.0	3.5	3.8	1.0	221	chr2R	9945441	intron	Mef2 -	chr2R	9945552	intron	Mef2 -	chr2R	9945662	intron	Mef2 -	chr2R_5_9945001	chr2R_9945001	RC5_1-HE
716	chr2R	10005856	10005874	chr2R	10007016	10007029	1360	9	1164	3.0	3.0	3.0	2.2	1173	chr2R	10005856	intron	Pka-R2 -	chr2R	10006442	intron	Pka-R2 -	chr2R	10007029	intron	Pka-R2 -	chr2R_9_10005001	chr2R_10005001	RC5_1-HE
721	chr2R	10176870	10176891	chr2R	10186046	10186067	roo	9	9176	4.0	2.5	3.2	2.1	9197	chr2R	10176870	intron	KCNQ -	chr2R	10181468	intron	KCNQ -	chr2R	10186067	intron	KCNQ -	chr2R_9_10180001	chr2R_10180001	RC5_1-HE
734	chr2R	10585573	10585590	chr2R	10594155	10594173	Tirant	12	8583	3.0	5.0	4.0	2.4	8600	chr2R	10585573	intron	psq +	chr2R	10589873	intron	psq +	chr2R	10594173	intron	psq +	chr2R_12_10585001	chr2R_10585001	RC5_1-HE
744	chr2R	10948023	10948062	chr2R	10955575	10955579	17.6	9	7545	1.0	2.5	1.8	3.2	7556	chr2R	10948023	intergenic	not near genes	chr2R	10951801	intergenic	not near genes	chr2R	10955579	intergenic	not near genes	chr2R_9_10950001	chr2R_10950001	RC5_1-HE
747	chr2R	10979680	10979686	chr2R	10980149	10980155	297	5	469	2.5	5.5	4.0	1.0	475	chr2R	10979680	intergenic	not near genes	chr2R	10979918	intergenic	not near genes	chr2R	10980155	intergenic	not near genes	chr2R_5_10975001	chr2R_10975001	RC5_1-HE
748	chr2R	11009833	11009843	chr2R	11018990	11019016	roo	5	9171	4.0	4.5	4.2	1.0	9183	chr2R	11009833	intron	luna -	chr2R	11014424	intron	luna -	chr2R	11019016	intron	luna -	chr2R_5_11010001	chr2R_11010001	RC5_1-HE
749	chr2R	11019877	11019880	chr2R	11024944	11024947	jockey	4	5066	5.5	3.5	4.5	0.7	5070	chr2R	11019877	intron	luna -	chr2R	11022412	intron	luna -	chr2R	11024947	intron	luna -	chr2R_4_11020001	chr2R_11020001	RC5_1-HE
750	chr2R	11019883	11019905	chr2R	11024940	11024971	jockey	6	5065	3.0	3.5	3.2	1.4	5088	chr2R	11019883	intron	luna -	chr2R	11022427	intron	luna -	chr2R	11024971	intron	luna -	chr2R_6_11020001	chr2R_11020001	RC5_1-HE
751	chr2R	11019906	11019910	chr2R	11024939	11024977	jockey	4	5053	2.5	3.5	3.0	1.0	5071	chr2R	11019906	intron	luna -	chr2R	11022442	intron	luna -	chr2R	11024977	intron	luna -	chr2R_4_11020001	chr2R_11020001	RC5_1-HE
756	chr2R	11207814	11207848	chr2R	11208008	11208009	BS	14	191	7.5	4.5	6.0	2.0	195	chr2R	11207814	intron	shn +	chr2R	11207912	intron	shn +	chr2R	11208009	intron	shn +	chr2R_14_11205001	chr2R_11205001	RC5_1-HE
758	chr2R	11297640	11297651	chr2R	11301962	11301973	flea	4	4322	2.5	0.0	1.2	1.8	4333	chr2R	11297640	intergenic	CG42336 -	chr2R	11299806	intergenic	not near genes	chr2R	11301973	5` UTR	CG7741 +	chr2R_4_11295001	chr2R_11295001	RC5_1-HE
763	chr2R	11415515	11415550	chr2R	11418665	11418700	opus	14	3148	5.0	4.0	4.5	2.5	3185	chr2R	11415515	intron	Drip -	chr2R	11417108	intron	Drip -	chr2R	11418700	intron	Drip -	chr2R_14_11415001	chr2R_11415001	RC5_1-HE
764	chr2R	11472646	11472676	chr2R	11473844	11473851	pogo	8	1195	3.0	1.5	2.2	2.5	1205	chr2R	11472646	intergenic	not near genes	chr2R	11473248	intergenic	not near genes	chr2R	11473851	intergenic	not near genes	chr2R_8_11470001	chr2R_11470001	RC5_1-HE
783	chr2R	12481145	12481170	chr2R	12482939	12482957	roo	4	1793	2.5	3.5	3.0	1.0	1812	chr2R	12481145	exon	Dh44-R2 +	chr2R	12482051	intron	Dh44-R2 +	chr2R	12482957	intron	Dh44-R2 +	chr2R_4_12480001	chr2R_12480001	RC5_1-HE
784	chr2R	12501696	12501723	chr2R	12503858	12503886	Rt1c	4	2161	3.0	2.0	2.5	1.1	2190	chr2R	12501696	intron	fdl -	chr2R	12502791	intron	fdl -	chr2R	12503886	intron	fdl -	chr2R_4_12500001	chr2R_12500001	RC5_1-HE
789	chr2R	12707526	12707549	chr2R	12715893	12715916	roo	8	8367	0.0	2.0	1.0	4.0	8390	chr2R	12707526	intron	CG42663 +	chr2R	12711721	intron	CG42663 +	chr2R	12715916	intron	CG42663 +	chr2R_8_12710001	chr2R_12710001	RC5_1-HE
792	chr2R	12789294	12789324	chr2R	12797658	12797688	roo	8	8358	4.5	3.5	4.0	1.6	8394	chr2R	12789294	intron,3` UTR	sca +,CR45137 -	chr2R	12793491	intron,intron	sca +,CR45137 -	chr2R	12797688	intron,3` UTR	sca +,CR45137 -	chr2R_8_12790001	chr2R_12790001	RC5_1-HE
806	chr2R	13580500	13580532	chr2R	13580851	13580883	jockey	6	351	0.5	2.0	1.2	2.7	383	chr2R	13580500	3` UTR	CG6191 -	chr2R	13580692	3` UTR,3` UTR	CG6191 -,CG45088 -	chr2R	13580883	3` UTR,3` UTR	CG6191 -,CG45088 -	chr2R_6_13580001	chr2R_13580001	RC5_1-HE
808	chr2R	13728131	13728142	chr2R	13735792	13735803	opus	10	7661	5.5	0.0	2.8	2.6	7672	chr2R	13728131	intron	fas +	chr2R	13731967	intron	fas +	chr2R	13735803	intron	fas +	chr2R_10_13730001	chr2R_13730001	RC5_1-HE
813	chr2R	13905612	13905630	chr2R	13907595	13907612	Rt1a	4	1983	2.5	3.0	2.8	1.1	2000	chr2R	13905612	intron	shot -	chr2R	13906612	intron	shot -	chr2R	13907612	intron	shot -	chr2R_4_13905001	chr2R_13905001	RC5_1-HE
822	chr2R	14467295	14467326	chr2R	14476448	14476477	roo	6	9152	4.5	2.0	3.2	1.4	9182	chr2R	14467295	intergenic	not near genes	chr2R	14471886	intergenic	not near genes	chr2R	14476477	5` UTR	CR44462 +	chr2R_6_14470001	chr2R_14470001	RC5_1-HE
823	chr2R	14497386	14497421	chr2R	14498553	14498588	1360	14	1167	1.5	3.0	2.2	4.4	1202	chr2R	14497386	3` UTR	Cpsf160 -	chr2R	14497987	intron	Cpsf160 -	chr2R	14498588	3` UTR	Cpsf160 -	chr2R_14_14495001	chr2R_14495001	RC5_1-HE
828	chr2R	14889207	14889240	chr2R	14897816	14897845	Max-element	5	8608	1.0	0.0	0.5	3.3	8638	chr2R	14889207	intergenic	Cyp6a8 -	chr2R	14893526	intergenic	not near genes	chr2R	14897845	intergenic	not near genes	chr2R_5_14890001	chr2R_14890001	RC5_1-HE
834	chr2R	15084977	15085001	chr2R	15092027	15092051	297	7	7050	5.5	3.0	4.2	1.3	7074	chr2R	15084977	intergenic	not near genes	chr2R	15088514	intergenic	not near genes	chr2R	15092051	5` UTR	CR44457 +	chr2R_7_15085001	chr2R_15085001	RC5_1-HE
837	chr2R	15119317	15119351	chr2R	15127799	15127833	Tirant	11	8482	2.5	6.0	4.2	2.1	8516	chr2R	15119317	intron	chn +	chr2R	15123575	intron	chn +	chr2R	15127833	intron	chn +	chr2R_11_15120001	chr2R_15120001	RC5_1-HE
869	chr2R	17236512	17236532	chr2R	17241717	17241737	copia	7	5205	1.5	6.0	3.8	1.5	5225	chr2R	17236512	intron	mbl +	chr2R	17239124	intron	mbl +	chr2R	17241737	intron	mbl +	chr2R_7_17235001	chr2R_17235001	RC5_1-HE
870	chr2R	17236533	17236541	chr2R	17241712	17241746	copia	6	5201	1.0	5.0	3.0	1.5	5213	chr2R	17236533	intron	mbl +	chr2R	17239140	intron	mbl +	chr2R	17241746	intron	mbl +	chr2R_6_17235001	chr2R_17235001	RC5_1-HE
872	chr2R	17485918	17485938	chr2R	17490681	17490701	F-element	5	4763	5.0	2.0	3.5	1.1	4783	chr2R	17485918	5` UTR,intron	CG43110 -,NT5E-2 +	chr2R	17488310	intron	NT5E-2 +	chr2R	17490701	intron	NT5E-2 +	chr2R_5_17485001	chr2R_17485001	RC5_1-HE
875	chr2R	17782363	17782390	chr2R	17783567	17783594	pogo	6	1204	2.5	1.0	1.8	2.1	1231	chr2R	17782363	intergenic	CG33981 -,fab1 -	chr2R	17782978	intergenic	not near genes	chr2R	17783594	intergenic	mir-31a -	chr2R_6_17780001	chr2R_17780001	RC5_1-HE
876	chr2R	17784027	17784057	chr2R	17784269	17784299	pogo	9	240	1.5	5.0	3.2	2.1	272	chr2R	17784027	intergenic	mir-31a -	chr2R	17784163	intergenic	mir-31a -	chr2R	17784299	intergenic	mir-31a -	chr2R_9_17780001	chr2R_17780001	RC5_1-HE
886	chr2R	18045674	18045701	chr2R	18046027	18046054	jockey	6	353	1.0	3.5	2.2	1.9	380	chr2R	18045674	intergenic	not near genes	chr2R	18045864	intergenic	not near genes	chr2R	18046054	intergenic	CG5767 -	chr2R_6_18045001	chr2R_18045001	RC5_1-HE
888	chr2R	18111690	18111713	chr2R	18115559	18115582	F-element	7	3869	4.0	3.5	3.8	1.5	3892	chr2R	18111690	intergenic	not near genes	chr2R	18113636	intergenic	not near genes	chr2R	18115582	intergenic	not near genes	chr2R_7_18110001	chr2R_18110001	RC5_1-HE
893	chr2R	18358390	18358422	chr2R	18372603	18372635	roo	9	14213	2.0	2.0	2.0	3.0	14245	chr2R	18358390	intergenic	not near genes	chr2R	18365512	intergenic	not near genes	chr2R	18372635	intergenic	not near genes	chr2R_9_18365001	chr2R_18365001	RC5_1-HE
896	chr2R	18575811	18575828	chr2R	18581987	18582017	3S18	4	6184	1.5	3.0	2.2	1.2	6206	chr2R	18575811	intron	GEFmeso -	chr2R	18578914	intron	GEFmeso -	chr2R	18582017	intron	GEFmeso -	chr2R_4_18575001	chr2R_18575001	RC5_1-HE
920	chr2R	19776600	19776622	chr2R	19779924	19779946	jockey	6	3324	4.0	1.5	2.8	1.6	3346	chr2R	19776600	intergenic	not near genes	chr2R	19778273	intergenic	not near genes	chr2R	19779946	intergenic	not near genes	chr2R_6_19775001	chr2R_19775001	RC5_1-HE
922	chr2R	19914850	19914869	chr2R	19922263	19922282	mdg1	5	7413	1.5	4.0	2.8	1.3	7432	chr2R	19914850	intergenic	not near genes	chr2R	19918566	intergenic	not near genes	chr2R	19922282	intergenic	not near genes	chr2R_5_19915001	chr2R_19915001	RC5_1-HE
927	chr2R	20069241	20069273	chr2R	20071872	20071904	opus	5	2631	3.0	0.5	1.8	1.8	2663	chr2R	20069241	intergenic	not near genes	chr2R	20070572	intergenic	not near genes	chr2R	20071904	intergenic	not near genes	chr2R_5_20070001	chr2R_20070001	RC5_1-HE
942	chr2R	20739440	20739479	chr2R	20744208	20744248	F-element	15	4766	2.0	4.0	3.0	3.8	4808	chr2R	20739440	intron	dpr +	chr2R	20741844	intron	dpr +	chr2R	20744248	intron	dpr +	chr2R_15_20740001	chr2R_20740001	RC5_1-HE
963	chr2R	21753082	21753096	chr2R	21753568	21753580	roo	9	486	7.0	0.5	3.8	1.9	498	chr2R	21753082	intergenic	not near genes	chr2R	21753331	intergenic	not near genes	chr2R	21753580	intergenic	not near genes	chr2R_9_21750001	chr2R_21750001	RC5_1-HE
965	chr2R	21809523	21809554	chr2R	21817764	21817795	roo	4	8241	2.0	1.0	1.5	1.6	8272	chr2R	21809523	intergenic	not near genes	chr2R	21813659	intergenic	not near genes	chr2R	21817795	intergenic	not near genes	chr2R_4_21810001	chr2R_21810001	RC5_1-HE
979	chr2R	22349689	22349723	chr2R	22351474	22351508	jockey	19	1784	2.5	4.0	3.2	4.5	1819	chr2R	22349689	intron	Liprin-gamma -	chr2R	22350598	intron	Liprin-gamma -	chr2R	22351508	intron	Liprin-gamma -	chr2R_19_22350001	chr2R_22350001	RC5_1-HE
984	chr2R	22525748	22525777	chr2R	22529304	22529333	jockey	7	3556	1.5	3.5	2.5	2.0	3585	chr2R	22525748	intron	px -	chr2R	22527540	intron	px -	chr2R	22529333	intron	px -	chr2R_7_22525001	chr2R_22525001	RC5_1-HE
988	chr2R	22774962	22775002	chr2R	22775382	22775422	jockey	16	420	7.5	8.0	7.8	1.8	460	chr2R	22774962	intron	CG42260 -	chr2R	22775192	intron	CG42260 -	chr2R	22775422	intron	CG42260 -	chr2R_16_22775001	chr2R_22775001	RC5_1-HE
990	chr2R	22843023	22843038	chr2R	22844986	22845001	flea	5	1963	7.0	1.5	4.2	1.0	1978	chr2R	22843023	intergenic	CG9826 +	chr2R	22844012	intergenic	not near genes	chr2R	22845001	intergenic	not near genes	chr2R_5_22840001	chr2R_22840001	RC5_1-HE
1008	chr2R	23402607	23402642	chr2R	23407684	23407719	flea	5	5077	0.5	3.5	2.0	1.7	5112	chr2R	23402607	intergenic	CG3520 -	chr2R	23405163	intergenic	not near genes	chr2R	23407719	intergenic	not near genes	chr2R_5_23405001	chr2R_23405001	RC5_1-HE
1012	chr2R	23529571	23529594	chr2R	23537148	23537171	412	4	7577	3.5	1.0	2.2	1.2	7600	chr2R	23529571	intron	bw -	chr2R	23533371	intron	bw -	chr2R	23537171	exon	bw -	chr2R_4_23530001	chr2R_23530001	RC5_1-HE
1023	chr2R	24177239	24177254	chr2R	24184725	24184740	412	4	7486	3.5	2.0	2.8	1.1	7501	chr2R	24177239	3` UTR	Nop60B +	chr2R	24180990	intron	Nop60B +	chr2R	24184740	3` UTR	Nop60B +	chr2R_4_24180001	chr2R_24180001	RC5_1-HE
1030	chr2R	24647587	24647614	chr2R	24655145	24655172	412	4	7557	5.0	1.5	3.2	1.0	7585	chr2R	24647587	intergenic	not near genes	chr2R	24651380	intergenic	not near genes	chr2R	24655172	intergenic	not near genes	chr2R_4_24650001	chr2R_24650001	RC5_1-HE
1031	chr2R	24727886	24727913	chr2R	24735395	24735422	mdg1	6	7508	1.0	3.0	2.0	2.0	7536	chr2R	24727886	intron	Mid1 -	chr2R	24731654	intron	Mid1 -	chr2R	24735422	intron	Mid1 -	chr2R_6_24730001	chr2R_24730001	RC5_1-HE
1044	chr2R	25141650	25141683	chr2R	25159341	25159374	roo	14	17691	2.0	5.0	3.5	3.1	17724	chr2R	25141650	intergenic	not near genes	chr2R	25150512	intergenic	not near genes	chr2R	25159374	intergenic	not near genes	chr2R_14_25150001	chr2R_25150001	RC5_1-HE
1050	chr3L	402692	402718	chr3L	409746	409772	297	17	7053	6.5	10.0	8.2	1.8	7080	chr3L	402692	intergenic	not near genes	chr3L	406232	intergenic	not near genes	chr3L	409772	intergenic	not near genes	chr3L_17_405001	chr3L_405001	RC5_1-HE
1063	chr3L	925181	925209	chr3L	932608	932636	mdg1	6	7427	1.0	3.0	2.0	2.0	7455	chr3L	925181	intron	Glut1 +	chr3L	928908	intron	Glut1 +	chr3L	932636	intron	Glut1 +	chr3L_6_925001	chr3L_925001	RC5_1-HE
1065	chr3L	939770	939782	chr3L	940892	940904	jockey	6	1122	10.0	6.0	8.0	0.7	1134	chr3L	939770	intron	Glut1 +	chr3L	940337	intron	Glut1 +	chr3L	940904	intron	Glut1 +	chr3L_6_940001	chr3L_940001	RC5_1-HE
1066	chr3L	939783	939802	chr3L	940889	940923	jockey	12	1120	7.5	6.0	6.8	1.5	1140	chr3L	939783	intron	Glut1 +	chr3L	940353	intron	Glut1 +	chr3L	940923	intron	Glut1 +	chr3L_12_940001	chr3L_940001	RC5_1-HE
1074	chr3L	1154135	1154162	chr3L	1163284	1163313	roo	8	9151	1.0	2.0	1.5	3.2	9178	chr3L	1154135	intron	bab2 -	chr3L	1158724	intron	bab2 -	chr3L	1163313	intron	bab2 -	chr3L_8_1155001	chr3L_1155001	RC5_1-HE
1075	chr3L	1219593	1219625	chr3L	1227327	1227359	412	8	7734	1.0	3.0	2.0	2.7	7766	chr3L	1219593	intron	mwh +	chr3L	1223476	intron	mwh +	chr3L	1227359	intron	mwh +	chr3L_8_1220001	chr3L_1220001	RC5_1-HE
1087	chr3L	1505999	1506007	chr3L	1513597	1513605	17.6	5	7598	1.5	2.5	2.0	1.7	7606	chr3L	1505999	intron,intron	Psa +,cue -	chr3L	1509802	intron,intron	Psa +,cue -	chr3L	1513605	intron,intron	Psa +,cue -	chr3L_5_1505001	chr3L_1505001	RC5_1-HE
1088	chr3L	1506011	1506031	chr3L	1513594	1513629	17.6	12	7597	0.0	1.5	0.8	6.7	7618	chr3L	1506011	intron,intron	Psa +,cue -	chr3L	1509820	intron,intron	Psa +,cue -	chr3L	1513629	intron,intron	Psa +,cue -	chr3L_12_1505001	chr3L_1505001	RC5_1-HE
1102	chr3L	2447504	2447511	chr3L	2456661	2456668	roo	4	9157	1.5	6.5	4.0	0.8	9164	chr3L	2447504	intron	CG45186 +	chr3L	2452086	intron	CG45186 +	chr3L	2456668	intron	CG45186 +	chr3L_4_2450001	chr3L_2450001	RC5_1-HE
1103	chr3L	2447516	2447532	chr3L	2456659	2456689	roo	4	9153	1.0	6.0	3.5	0.9	9173	chr3L	2447516	intron	CG45186 +	chr3L	2452102	intron	CG45186 +	chr3L	2456689	intron	CG45186 +	chr3L_4_2450001	chr3L_2450001	RC5_1-HE
1117	chr3L	2927836	2927870	chr3L	2936114	2936148	Tirant	16	8278	5.5	8.5	7.0	2.0	8312	chr3L	2927836	intron	Shab +	chr3L	2931992	intron	Shab +	chr3L	2936148	intron	Shab +	chr3L_16_2930001	chr3L_2930001	RC5_1-HE
1129	chr3L	3475074	3475109	chr3L	3475519	3475554	jockey	12	443	0.5	9.0	4.8	2.1	480	chr3L	3475074	intron	CG42324 +	chr3L	3475314	intron	CG42324 +	chr3L	3475554	intron	CG42324 +	chr3L_12_3475001	chr3L_3475001	RC5_1-HE
1134	chr3L	3601298	3601330	chr3L	3606609	3606610	copia	11	5307	4.5	4.0	4.2	2.1	5312	chr3L	3601298	intron	Eip63E +	chr3L	3603954	intron	Eip63E +	chr3L	3606610	intron	Eip63E +	chr3L_11_3600001	chr3L_3600001	RC5_1-HE
1138	chr3L	3833754	3833768	chr3L	3833984	3834010	pogo	8	240	4.0	3.0	3.5	1.8	256	chr3L	3833754	intron	enc +	chr3L	3833882	intron	enc +	chr3L	3834010	intron	enc +	chr3L_8_3830001	chr3L_3830001	RC5_1-HE
1144	chr3L	4328747	4328765	chr3L	4336246	4336264	412	6	7499	1.0	9.5	5.2	1.0	7517	chr3L	4328747	intron	Cip4 -	chr3L	4332506	intron	Cip4 -	chr3L	4336264	intron	Cip4 -	chr3L_6_4330001	chr3L_4330001	RC5_1-HE
1162	chr3L	4901122	4901150	chr3L	4907313	4907341	diver	7	6191	3.0	0.5	1.8	2.5	6219	chr3L	4901122	intergenic	CG13704 +	chr3L	4904232	intergenic	not near genes	chr3L	4907341	intergenic	not near genes	chr3L_7_4900001	chr3L_4900001	RC5_1-HE
1166	chr3L	5034162	5034190	chr3L	5043315	5043343	roo	13	9153	6.0	2.0	4.0	2.6	9181	chr3L	5034162	intron	Con -	chr3L	5038752	intron	Con -	chr3L	5043343	intron	Con -	chr3L_13_5035001	chr3L_5035001	RC5_1-HE
1167	chr3L	5045455	5045483	chr3L	5050237	5050265	Doc	14	4782	6.5	8.0	7.2	1.7	4810	chr3L	5045455	intron	Con -	chr3L	5047860	intron	Con -	chr3L	5050265	intron	Con -	chr3L_14_5045001	chr3L_5045001	RC5_1-HE
1180	chr3L	5299151	5299183	chr3L	5306588	5306611	Quasimodo	6	7436	4.5	0.0	2.2	1.9	7460	chr3L	5299151	intergenic	not near genes	chr3L	5302881	intergenic	not near genes	chr3L	5306611	intergenic	not near genes	chr3L_6_5300001	chr3L_5300001	RC5_1-HE
1187	chr3L	5537724	5537758	chr3L	5538067	5538085	jockey	9	341	1.0	1.5	1.2	4.1	361	chr3L	5537724	intergenic	not near genes	chr3L	5537904	intergenic	not near genes	chr3L	5538085	intergenic	CG10625 -	chr3L_9_5535001	chr3L_5535001	RC5_1-HE
1194	chr3L	5910031	5910056	chr3L	5910273	5910298	pogo	11	242	5.5	0.5	3.0	2.8	267	chr3L	5910031	intron	CG13288 +	chr3L	5910164	intron	CG13288 +	chr3L	5910298	intron	CG13288 +	chr3L_11_5910001	chr3L_5910001	RC5_1-HE
1195	chr3L	5926321	5926332	chr3L	5926512	5926523	BS	4	191	5.0	3.5	4.2	0.8	202	chr3L	5926321	intron	Vap-33B +	chr3L	5926422	intron	Vap-33B +	chr3L	5926523	intron	Vap-33B +	chr3L_4_5925001	chr3L_5925001	RC5_1-HE
1196	chr3L	5926334	5926347	chr3L	5926504	5926538	BS	5	183	2.5	1.0	1.8	1.8	204	chr3L	5926334	intron	Vap-33B +	chr3L	5926436	intron	Vap-33B +	chr3L	5926538	intron	Vap-33B +	chr3L_5_5925001	chr3L_5925001	RC5_1-HE
1198	chr3L	6001679	6001716	chr3L	6004380	6004417	jockey	13	2699	6.0	3.0	4.5	2.4	2738	chr3L	6001679	intron	PVRAP +	chr3L	6003048	intron	PVRAP +	chr3L	6004417	intron	PVRAP +	chr3L_13_6000001	chr3L_6000001	RC5_1-HE
1200	chr3L	6040370	6040393	chr3L	6042722	6042750	Doc	7	2353	4.0	6.0	5.0	1.2	2380	chr3L	6040370	intergenic	Jon65Aiv +	chr3L	6041560	intergenic	not near genes	chr3L	6042750	intergenic	not near genes	chr3L_7_6040001	chr3L_6040001	RC5_1-HE
1204	chr3L	6220918	6220947	chr3L	6230071	6230100	roo	5	9150	1.5	1.5	1.5	2.0	9182	chr3L	6220918	5` UTR	pncr008:3L +	chr3L	6225509	intergenic	not near genes	chr3L	6230100	intergenic	not near genes	chr3L_5_6225001	chr3L_6225001	RC5_1-HE
1209	chr3L	6335007	6335035	chr3L	6335479	6335507	297	11	472	7.5	4.5	6.0	1.6	500	chr3L	6335007	intron	CG13300 -	chr3L	6335257	intron	CG13300 -	chr3L	6335507	intron	CG13300 -	chr3L_11_6335001	chr3L_6335001	RC5_1-HE
1211	chr3L	6405659	6405686	chr3L	6432124	6432151	roo	9	26465	6.0	4.5	5.2	1.5	26492	chr3L	6405659	intron	CG42747 +	chr3L	6418905	intron	CG42747 +	chr3L	6432151	intron	CG42747 +	chr3L_9_6415001	chr3L_6415001	RC5_1-HE
1216	chr3L	6781123	6781139	chr3L	6783137	6783153	Doc	14	2014	5.5	0.0	2.8	3.7	2030	chr3L	6781123	intergenic	not near genes	chr3L	6782138	intergenic	not near genes	chr3L	6783153	intergenic	not near genes	chr3L_14_6780001	chr3L_6780001	RC5_1-HE
1219	chr3L	6887515	6887551	chr3L	6895008	6895044	roo	13	7490	3.0	1.5	2.2	4.1	7529	chr3L	6887515	intergenic	not near genes	chr3L	6891280	intergenic	not near genes	chr3L	6895044	intergenic	not near genes	chr3L_13_6890001	chr3L_6890001	RC5_1-HE
1227	chr3L	7129955	7129970	chr3L	7130148	7130163	BS	4	192	3.5	1.5	2.5	1.1	208	chr3L	7129955	intergenic	CG15829 +	chr3L	7130059	intergenic	CG15829 +	chr3L	7130163	intergenic	CG15829 +	chr3L_4_7130001	chr3L_7130001	RC5_1-HE
1234	chr3L	7377317	7377348	chr3L	7380423	7380454	297	8	3105	0.5	1.5	1.0	4.0	3137	chr3L	7377317	intron	SMSr -	chr3L	7378886	intron	SMSr -	chr3L	7380454	intron	SMSr -	chr3L_8_7375001	chr3L_7375001	RC5_1-HE
1238	chr3L	7498758	7498790	chr3L	7503536	7503568	F-element	8	4778	6.5	2.0	4.2	1.5	4810	chr3L	7498758	5` UTR	CG8539 -	chr3L	7501163	intergenic	not near genes	chr3L	7503568	intergenic	not near genes	chr3L_8_7500001	chr3L_7500001	RC5_1-HE
1244	chr3L	7793711	7793743	chr3L	7800764	7800796	297	15	7052	5.0	1.5	3.2	3.6	7085	chr3L	7793711	intron	CG32369 -	chr3L	7797254	intron	CG32369 -	chr3L	7800796	intron	CG32369 -	chr3L_15_7795001	chr3L_7795001	RC5_1-HE
1247	chr3L	7886513	7886547	chr3L	7889032	7889066	Stalker4	13	2517	3.0	4.0	3.5	2.9	2553	chr3L	7886513	intron	CG32365 +	chr3L	7887790	intron	CG32365 +	chr3L	7889066	intron	CG32365 +	chr3L_13_7885001	chr3L_7885001	RC5_1-HE
1248	chr3L	7916829	7916854	chr3L	7926001	7926026	roo	7	9172	4.5	3.0	3.8	1.5	9197	chr3L	7916829	3` UTR	syd -	chr3L	7921428	intron	syd -	chr3L	7926026	3` UTR	syd -	chr3L_7_7920001	chr3L_7920001	RC5_1-HE
1251	chr3L	7985373	7985381	chr3L	7987703	7987711	NOF	5	2330	5.5	1.5	3.5	1.1	2338	chr3L	7985373	intron	nmo +	chr3L	7986542	intron	nmo +	chr3L	7987711	intron	nmo +	chr3L_5_7985001	chr3L_7985001	RC5_1-HE
1269	chr3L	8791267	8791294	chr3L	8796692	8796719	I-element	6	5423	5.5	0.0	2.8	1.6	5452	chr3L	8791267	exon	Fhos +	chr3L	8793993	intron	Fhos +	chr3L	8796719	intron	Fhos +	chr3L_6_8790001	chr3L_8790001	RC5_1-HE
1282	chr3L	9076927	9076959	chr3L	9084487	9084520	412	13	7561	2.5	7.0	4.8	2.2	7593	chr3L	9076927	exon	Tequila +	chr3L	9080724	intron	Tequila +	chr3L	9084520	exon	Tequila +	chr3L_13_9080001	chr3L_9080001	RC5_1-HE
1286	chr3L	9164695	9164729	chr3L	9166163	9166197	hobo	30	1468	8.0	6.0	7.0	3.8	1502	chr3L	9164695	intron	Rdl -	chr3L	9165446	intron	Rdl -	chr3L	9166197	intron	Rdl -	chr3L_30_9165001	chr3L_9165001	RC5_1-HE
1287	chr3L	9219245	9219276	chr3L	9219916	9219949	jockey	12	671	4.5	8.0	6.2	1.7	704	chr3L	9219245	intergenic	not near genes	chr3L	9219597	intergenic	not near genes	chr3L	9219949	intergenic	not near genes	chr3L_12_9215001	chr3L_9215001	RC5_1-HE
1289	chr3L	9270631	9270643	chr3L	9278377	9278399	roo	5	7754	4.5	1.5	3.0	1.2	7768	chr3L	9270631	intron	GluRIB +	chr3L	9274515	intron	GluRIB +	chr3L	9278399	exon	GluRIB +	chr3L_5_9270001	chr3L_9270001	RC5_1-HE
1292	chr3L	9443519	9443540	chr3L	9445307	9445328	S-element	4	1788	3.0	1.0	2.0	1.3	1809	chr3L	9443519	intron	CG33926 +	chr3L	9444424	intron	CG33926 +	chr3L	9445328	intron	CG33926 +	chr3L_4_9440001	chr3L_9440001	RC5_1-HE
1296	chr3L	9533775	9533784	chr3L	9541315	9541345	412	4	7552	1.5	8.0	4.8	0.7	7570	chr3L	9533775	intergenic	not near genes	chr3L	9537560	intergenic	not near genes	chr3L	9541345	intergenic	not near genes	chr3L_4_9535001	chr3L_9535001	RC5_1-HE
1298	chr3L	9571898	9571933	chr3L	9572247	9572282	jockey	12	349	4.5	4.0	4.2	2.3	384	chr3L	9571898	intron	CG42673 +	chr3L	9572090	intron	CG42673 +	chr3L	9572282	intron	CG42673 +	chr3L_12_9570001	chr3L_9570001	RC5_1-HE
1299	chr3L	9575927	9575940	chr3L	9581006	9581013	jockey	4	5077	4.5	7.5	6.0	0.6	5086	chr3L	9575927	intron	CG42673 +	chr3L	9578470	intron	CG42673 +	chr3L	9581013	intron	CG42673 +	chr3L_4_9575001	chr3L_9575001	RC5_1-HE
1309	chr3L	9929667	9929696	chr3L	9938447	9938476	roo	13	8779	8.0	8.0	8.0	1.4	8809	chr3L	9929667	intron	CG34356 +	chr3L	9934072	intron	CG34356 +	chr3L	9938476	intron	CG34356 +	chr3L_13_9930001	chr3L_9930001	RC5_1-HE
1313	chr3L	10060114	10060116	chr3L	10067694	10067696	17.6	5	7580	13.0	5.0	9.0	0.5	7582	chr3L	10060114	intron	dpr6 +	chr3L	10063905	intron	dpr6 +	chr3L	10067696	intron	dpr6 +	chr3L_5_10060001	chr3L_10060001	RC5_1-HE
1331	chr3L	10414940	10414973	chr3L	10417313	10417345	Doc	24	2372	1.0	5.0	3.0	6.0	2405	chr3L	10414940	intergenic	CG12362 +	chr3L	10416142	intergenic	not near genes	chr3L	10417345	intergenic	not near genes	chr3L_24_10415001	chr3L_10415001	RC5_1-HE
1352	chr3L	11087061	11087089	chr3L	11088851	11088876	S-element	9	1788	2.5	2.5	2.5	2.6	1815	chr3L	11087061	intron	JIL-1 -	chr3L	11087968	intron	JIL-1 -	chr3L	11088876	intron	JIL-1 -	chr3L_9_11085001	chr3L_11085001	RC5_1-HE
1353	chr3L	11105289	11105297	chr3L	11107001	11107009	X-element	4	1712	8.0	1.5	4.8	0.7	1720	chr3L	11105289	intergenic	not near genes	chr3L	11106149	intergenic	not near genes	chr3L	11107009	3` UTR	CG32073 -	chr3L_4_11105001	chr3L_11105001	RC5_1-HE
1356	chr3L	11264460	11264497	chr3L	11271413	11271450	17.6	6	6953	1.0	1.5	1.2	2.7	6990	chr3L	11264460	intergenic	not near genes	chr3L	11267955	intergenic	not near genes	chr3L	11271450	intergenic	not near genes	chr3L_6_11265001	chr3L_11265001	RC5_1-HE
1358	chr3L	11329689	11329727	chr3L	11332895	11332931	jockey	4	3205	2.0	2.0	2.0	1.3	3242	chr3L	11329689	intergenic	not near genes	chr3L	11331310	intergenic	not near genes	chr3L	11332931	intergenic	not near genes	chr3L_4_11330001	chr3L_11330001	RC5_1-HE
1371	chr3L	11723086	11723093	chr3L	11727882	11727889	Doc	5	4796	8.0	3.5	5.8	0.7	4803	chr3L	11723086	3` UTR	Bmcp +	chr3L	11725488	intron	Bmcp +	chr3L	11727889	3` UTR	Bmcp +	chr3L_5_11725001	chr3L_11725001	RC5_1-HE
1372	chr3L	11723094	11723114	chr3L	11727880	11727910	Doc	8	4794	3.5	3.0	3.2	1.9	4816	chr3L	11723094	3` UTR	Bmcp +	chr3L	11725502	intron	Bmcp +	chr3L	11727910	3` UTR	Bmcp +	chr3L_8_11725001	chr3L_11725001	RC5_1-HE
1379	chr3L	11864553	11864584	chr3L	11865849	11865880	pogo	14	1294	3.0	4.5	3.8	2.9	1327	chr3L	11864553	intron	CG44837 -	chr3L	11865216	intron	CG44837 -	chr3L	11865880	intron	CG44837 -	chr3L_14_11865001	chr3L_11865001	RC5_1-HE
1398	chr3L	12874925	12874963	chr3L	12877217	12877256	jockey	20	2292	2.5	10.0	6.2	2.8	2331	chr3L	12874925	intergenic	not near genes	chr3L	12876090	intergenic	not near genes	chr3L	12877256	intergenic	not near genes	chr3L_20_12875001	chr3L_12875001	RC5_1-HE
1401	chr3L	12919273	12919309	chr3L	12924747	12924752	Rt1c	10	5469	4.0	0.5	2.2	3.1	5479	chr3L	12919273	intergenic	not near genes	chr3L	12922012	intergenic	not near genes	chr3L	12924752	intergenic	not near genes	chr3L_10_12920001	chr3L_12920001	RC5_1-HE
1403	chr3L	12957784	12957811	chr3L	12962267	12962294	copia	12	4483	3.0	7.0	5.0	2.0	4510	chr3L	12957784	intergenic	not near genes	chr3L	12960039	intergenic	not near genes	chr3L	12962294	intergenic	not near genes	chr3L_12_12960001	chr3L_12960001	RC5_1-HE
1417	chr3L	13525155	13525178	chr3L	13532952	13532955	roo	8	7794	7.5	5.5	6.5	1.1	7800	chr3L	13525155	intergenic	not near genes	chr3L	13529055	intergenic	not near genes	chr3L	13532955	intergenic	not near genes	chr3L_8_13525001	chr3L_13525001	RC5_1-HE
1429	chr3L	13804543	13804577	chr3L	13822830	13822864	roo	17	18287	7.5	8.0	7.8	1.9	18321	chr3L	13804543	intergenic	not near genes	chr3L	13813704	intergenic	not near genes	chr3L	13822864	intergenic	not near genes	chr3L_17_13810001	chr3L_13810001	RC5_1-HE
1441	chr3L	14245565	14245594	chr3L	14245660	14245689	1360	13	95	9.0	3.5	6.2	1.8	124	chr3L	14245565	3` UTR	CR44561 -	chr3L	14245627	3` UTR	CR44561 -	chr3L	14245689	3` UTR	CR44561 -	chr3L_13_14245001	chr3L_14245001	RC5_1-HE
1442	chr3L	14267373	14267398	chr3L	14271814	14271839	F-element	11	4441	2.0	7.5	4.8	1.9	4466	chr3L	14267373	intergenic	not near genes	chr3L	14269606	intergenic	not near genes	chr3L	14271839	intergenic	not near genes	chr3L_11_14265001	chr3L_14265001	RC5_1-HE
1445	chr3L	14295979	14296016	chr3L	14296466	14296503	roo	20	485	6.0	8.5	7.2	2.4	524	chr3L	14295979	intron	fz +	chr3L	14296241	intron	fz +	chr3L	14296503	intron	fz +	chr3L_20_14295001	chr3L_14295001	RC5_1-HE
1446	chr3L	14312022	14312059	chr3L	14316836	14316843	X-element	10	4810	5.0	6.5	5.8	1.5	4821	chr3L	14312022	exon	fz +	chr3L	14314432	intron	fz +	chr3L	14316843	intron	fz +	chr3L_10_14310001	chr3L_14310001	RC5_1-HE
1453	chr3L	14468440	14468470	chr3L	14473650	14473680	copia	10	5210	5.0	2.0	3.5	2.2	5240	chr3L	14468440	intron	bbg -	chr3L	14471060	intron	bbg -	chr3L	14473680	intron	bbg -	chr3L_10_14470001	chr3L_14470001	RC5_1-HE
1456	chr3L	14524322	14524342	chr3L	14529085	14529105	F-element	7	4763	4.0	1.0	2.5	2.0	4783	chr3L	14524322	intron	bbg -	chr3L	14526714	intron	bbg -	chr3L	14529105	intron	bbg -	chr3L_7_14525001	chr3L_14525001	RC5_1-HE
1460	chr3L	14721182	14721208	chr3L	14723024	14723041	Rt1c	13	1841	7.0	2.5	4.8	2.2	1859	chr3L	14721182	intron	ome +	chr3L	14722112	intron	ome +	chr3L	14723041	intron	ome +	chr3L_13_14720001	chr3L_14720001	RC5_1-HE
1461	chr3L	14725601	14725627	chr3L	14728596	14728622	Doc	10	2995	4.0	4.5	4.2	1.9	3021	chr3L	14725601	intron	ome +	chr3L	14727112	intron	ome +	chr3L	14728622	intron	ome +	chr3L_10_14725001	chr3L_14725001	RC5_1-HE
1466	chr3L	14970755	14970765	chr3L	14971066	14971076	F-element	5	311	5.5	2.5	4.0	1.0	321	chr3L	14970755	intergenic	Tom +	chr3L	14970916	intergenic	not near genes	chr3L	14971076	intergenic	not near genes	chr3L_5_14970001	chr3L_14970001	RC5_1-HE
1469	chr3L	15085047	15085079	chr3L	15086214	15086246	1360	6	1167	1.0	3.0	2.0	2.0	1199	chr3L	15085047	intron	cp309 -	chr3L	15085646	intron	cp309 -	chr3L	15086246	intron	cp309 -	chr3L_6_15085001	chr3L_15085001	RC5_1-HE
1474	chr3L	15295765	15295801	chr3L	15298609	15298634	gypsy5	18	2843	3.5	8.0	5.8	2.6	2869	chr3L	15295765	intergenic	not near genes	chr3L	15297200	intergenic	not near genes	chr3L	15298634	intergenic	Best4 +	chr3L_18_15295001	chr3L_15295001	RC5_1-HE
1478	chr3L	15423761	15423778	chr3L	15426606	15426623	opus	8	2845	3.5	6.5	5.0	1.3	2862	chr3L	15423761	intergenic	not near genes	chr3L	15425192	intergenic	not near genes	chr3L	15426623	intergenic	not near genes	chr3L_8_15425001	chr3L_15425001	RC5_1-HE
1481	chr3L	15554921	15554950	chr3L	15556709	15556738	S-element	9	1788	1.5	3.0	2.2	2.8	1817	chr3L	15554921	intron	AGO2 +	chr3L	15555830	intron	AGO2 +	chr3L	15556738	intron	AGO2 +	chr3L_9_15555001	chr3L_15555001	RC5_1-HE
1497	chr3L	15929196	15929229	chr3L	15938344	15938377	roo	10	9148	1.5	4.0	2.8	2.6	9181	chr3L	15929196	intron	Pka-C3 -	chr3L	15933786	intron	Pka-C3 -	chr3L	15938377	intron	Pka-C3 -	chr3L_10_15930001	chr3L_15930001	RC5_1-HE
1502	chr3L	16184102	16184129	chr3L	16188922	16188949	X-element	15	4820	7.0	3.5	5.2	2.4	4847	chr3L	16184102	intergenic	not near genes	chr3L	16186526	intergenic	not near genes	chr3L	16188949	intergenic	not near genes	chr3L_15_16185001	chr3L_16185001	RC5_1-HE
1511	chr3L	16443847	16443879	chr3L	16446188	16446204	Doc	14	2340	2.5	6.0	4.2	2.7	2357	chr3L	16443847	intron,intron	CG33158 +,dsx-c73A -	chr3L	16445026	intron,intron	CG33158 +,dsx-c73A -	chr3L	16446204	intron,intron	CG33158 +,dsx-c73A -	chr3L_14_16445001	chr3L_16445001	RC5_1-HE
1514	chr3L	16493982	16494010	chr3L	16494490	16494528	jockey	18	516	6.5	5.0	5.8	2.6	546	chr3L	16493982	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L	16494255	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L	16494528	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L_18_16490001	chr3L_16490001	RC5_1-HE
1518	chr3L	16684016	16684052	chr3L	16689238	16689274	copia	14	5222	6.5	0.0	3.2	3.3	5258	chr3L	16684016	intron,intron	Lasp -,CG43954 -	chr3L	16686645	intron,intron	Lasp -,CG43954 -	chr3L	16689274	intron,intron,5` UTR	Lasp -,CG43954 -,CR45179 +	chr3L_14_16685001	chr3L_16685001	RC5_1-HE
1527	chr3L	16945725	16945755	chr3L	16954879	16954893	roo	14	9153	5.5	4.0	4.8	2.4	9168	chr3L	16945725	exon	Obp73a +	chr3L	16950309	intergenic	not near genes	chr3L	16954893	5` UTR	Nc73EF +	chr3L_14_16950001	chr3L_16950001	RC5_1-HE
1529	chr3L	17034931	17034962	chr3L	17035120	17035151	G2	4	189	1.5	3.5	2.5	1.1	220	chr3L	17034931	intergenic	not near genes	chr3L	17035041	intergenic	not near genes	chr3L	17035151	intergenic	not near genes	chr3L_4_17035001	chr3L_17035001	RC5_1-HE
1530	chr3L	17085001	17085036	chr3L	17094151	17094186	roo	25	9150	9.0	15.0	12.0	1.9	9185	chr3L	17085001	intron	Rbp6 -	chr3L	17089594	intron	Rbp6 -	chr3L	17094186	intron	Rbp6 -	chr3L_25_17085001	chr3L_17085001	RC5_1-HE
1547	chr3L	17730851	17730871	chr3L	17738181	17738200	mdg1	5	7330	4.5	3.0	3.8	1.0	7349	chr3L	17730851	intron	Ccn +	chr3L	17734526	intron	Ccn +	chr3L	17738200	intron	Ccn +	chr3L_5_17730001	chr3L_17730001	RC5_1-HE
1554	chr3L	17799812	17799840	chr3L	17801600	17801628	S-element	10	1788	2.5	3.5	3.0	2.5	1816	chr3L	17799812	intron	NUCB1 -	chr3L	17800720	intron	NUCB1 -	chr3L	17801628	intron	NUCB1 -	chr3L_10_17800001	chr3L_17800001	RC5_1-HE
1562	chr3L	18047705	18047741	chr3L	18056763	18056799	roo	10	9058	3.0	5.0	4.0	2.0	9094	chr3L	18047705	intron	Eip75B -	chr3L	18052252	intron	Eip75B -	chr3L	18056799	intron	Eip75B -	chr3L_10_18050001	chr3L_18050001	RC5_1-HE
1575	chr3L	18506130	18506160	chr3L	18509594	18509624	F-element	14	3464	8.0	6.5	7.2	1.7	3494	chr3L	18506130	intergenic	not near genes	chr3L	18507877	intergenic	not near genes	chr3L	18509624	intergenic	not near genes	chr3L_14_18505001	chr3L_18505001	RC5_1-HE
1577	chr3L	18514902	18514934	chr3L	18520094	18520126	BS	16	5192	2.0	6.5	4.2	3.1	5224	chr3L	18514902	intergenic	not near genes	chr3L	18517514	intergenic	not near genes	chr3L	18520126	intergenic	not near genes	chr3L_16_18515001	chr3L_18515001	RC5_1-HE
1578	chr3L	18528637	18528657	chr3L	18537822	18537842	roo	15	9185	7.0	4.0	5.5	2.3	9205	chr3L	18528637	intergenic	not near genes	chr3L	18533240	intergenic	not near genes	chr3L	18537842	intergenic	not near genes	chr3L_15_18530001	chr3L_18530001	RC5_1-HE
1581	chr3L	18593948	18593979	chr3L	18595929	18595957	Doc	11	1981	5.5	1.5	3.5	2.4	2009	chr3L	18593948	intergenic	term -	chr3L	18594952	intergenic	not near genes	chr3L	18595957	intergenic	CR45389 +	chr3L_11_18590001	chr3L_18590001	RC5_1-HE
1585	chr3L	18772405	18772435	chr3L	18781087	18781117	roo	11	8681	3.5	2.5	3.0	2.8	8712	chr3L	18772405	intron	ftz-f1 -	chr3L	18776761	intron	ftz-f1 -	chr3L	18781117	intron	ftz-f1 -	chr3L_11_18775001	chr3L_18775001	RC5_1-HE
1589	chr3L	18833788	18833813	chr3L	18834953	18834978	1360	6	1165	1.0	3.5	2.2	1.9	1190	chr3L	18833788	intron	Indy -	chr3L	18834383	intron	Indy -	chr3L	18834978	intron	Indy -	chr3L_6_18830001	chr3L_18830001	RC5_1-HE
1595	chr3L	19008857	19008872	chr3L	19009180	19009211	jockey	7	337	2.0	3.5	2.8	1.8	354	chr3L	19008857	intron	nkd -	chr3L	19009034	intron	nkd -	chr3L	19009211	intron	nkd -	chr3L_7_19005001	chr3L_19005001	RC5_1-HE
1600	chr3L	19117041	19117076	chr3L	19124489	19124524	mdg1	13	7443	3.5	6.0	4.8	2.2	7483	chr3L	19117041	intron	CG14082 -	chr3L	19120782	intron	CG14082 -	chr3L	19124524	intron	CG14082 -	chr3L_13_19120001	chr3L_19120001	RC5_1-HE
1601	chr3L	19208056	19208067	chr3L	19209431	19209440	Doc	5	1375	17.0	3.0	10.0	0.5	1384	chr3L	19208056	intron	fz2 -	chr3L	19208748	intron	fz2 -	chr3L	19209440	intron	fz2 -	chr3L_5_19205001	chr3L_19205001	RC5_1-HE
1602	chr3L	19208071	19208092	chr3L	19209430	19209467	Doc	13	1373	5.0	3.0	4.0	2.6	1396	chr3L	19208071	intron	fz2 -	chr3L	19208769	intron	fz2 -	chr3L	19209467	intron	fz2 -	chr3L_13_19205001	chr3L_19205001	RC5_1-HE
1612	chr3L	19820301	19820319	chr3L	19827851	19827869	412	7	7550	2.0	3.0	2.5	2.0	7568	chr3L	19820301	intron	Deaf1 +	chr3L	19824085	intron	Deaf1 +	chr3L	19827869	intron	Deaf1 +	chr3L_7_19820001	chr3L_19820001	RC5_1-HE
1613	chr3L	19848506	19848527	chr3L	19857697	19857718	roo	4	9191	1.0	3.0	2.0	1.3	9212	chr3L	19848506	intron	Papss +	chr3L	19853112	intron	Papss +	chr3L	19857718	intron	Papss +	chr3L_4_19850001	chr3L_19850001	RC5_1-HE
1616	chr3L	20113660	20113684	chr3L	20122918	20122942	roo	7	9257	4.0	1.5	2.8	1.8	9282	chr3L	20113660	intergenic	not near genes	chr3L	20118301	intergenic	not near genes	chr3L	20122942	intergenic	not near genes	chr3L_7_20115001	chr3L_20115001	RC5_1-HE
1621	chr3L	20257333	20257363	chr3L	20258454	20258484	pogo	15	1121	2.5	4.0	3.2	3.6	1151	chr3L	20257333	intron	rdgC +	chr3L	20257908	intron	rdgC +	chr3L	20258484	intron	rdgC +	chr3L_15_20255001	chr3L_20255001	RC5_1-HE
1624	chr3L	20476752	20476775	chr3L	20484352	20484375	springer	7	7600	1.0	1.0	1.0	3.5	7623	chr3L	20476752	3` UTR	isoQC +	chr3L	20480564	intergenic	not near genes	chr3L	20484375	3` UTR	ZnT77C -	chr3L_7_20480001	chr3L_20480001	RC5_1-HE
1629	chr3L	20590061	20590097	chr3L	20590601	20590637	412	21	537	8.0	6.0	7.0	2.6	576	chr3L	20590061	intergenic	not near genes	chr3L	20590349	intergenic	not near genes	chr3L	20590637	intergenic	not near genes	chr3L_21_20590001	chr3L_20590001	RC5_1-HE
1632	chr3L	20821282	20821310	chr3L	20824894	20824922	NOF	5	3612	2.0	1.0	1.5	2.0	3640	chr3L	20821282	intron	Pka-R1 +	chr3L	20823102	intron	Pka-R1 +	chr3L	20824922	intron	Pka-R1 +	chr3L_5_20820001	chr3L_20820001	RC5_1-HE
1640	chr3L	21014926	21014940	chr3L	21023400	21023422	Tirant	4	8478	5.5	4.5	5.0	0.7	8496	chr3L	21014926	intron	skd -	chr3L	21019174	intron	skd -	chr3L	21023422	intron	skd -	chr3L_4_21015001	chr3L_21015001	RC5_1-HE
1643	chr3L	21151867	21151897	chr3L	21156952	21156982	flea	11	5085	1.5	3.5	2.5	3.1	5115	chr3L	21151867	intron	Ac78C -	chr3L	21154424	intron	Ac78C -	chr3L	21156982	intron	Ac78C -	chr3L_11_21150001	chr3L_21150001	RC5_1-HE
1645	chr3L	21306151	21306178	chr3L	21315311	21315338	roo	9	9160	2.5	5.0	3.8	1.9	9187	chr3L	21306151	3` UTR,3` UTR	CG7632 +,Pc -	chr3L	21310744	intron	Pc -	chr3L	21315338	3` UTR	Pc -	chr3L_9_21310001	chr3L_21310001	RC5_1-HE
1646	chr3L	21372720	21372744	chr3L	21379229	21379253	McClintock	4	6509	1.0	2.5	1.8	1.4	6533	chr3L	21372720	intergenic	not near genes	chr3L	21375986	intergenic	not near genes	chr3L	21379253	intergenic	not near genes	chr3L_4_21375001	chr3L_21375001	RC5_1-HE
1652	chr3L	21749323	21749352	chr3L	21754484	21754490	Doc	9	5156	1.5	4.0	2.8	2.4	5167	chr3L	21749323	intron	Syn1 -	chr3L	21751906	intron	Syn1 -	chr3L	21754490	intron	Syn1 -	chr3L_9_21750001	chr3L_21750001	RC5_1-HE
1662	chr3L	22099676	22099706	chr3L	22105861	22105893	3S18	10	6186	3.0	5.5	4.2	1.9	6217	chr3L	22099676	intergenic	not near genes	chr3L	22102784	intergenic	not near genes	chr3L	22105893	intergenic	not near genes	chr3L_10_22100001	chr3L_22100001	RC5_1-HE
1674	chr3L	22555767	22555803	chr3L	22563238	22563273	blood	8	7470	1.5	0.5	1.0	4.0	7506	chr3L	22555767	intergenic	not near genes	chr3L	22559520	intergenic	not near genes	chr3L	22563273	intergenic	not near genes	chr3L_8_22555001	chr3L_22555001	RC5_1-HE
1675	chr3L	22577619	22577641	chr3L	22582408	22582430	Doc	7	4789	3.5	3.0	3.2	1.7	4811	chr3L	22577619	intergenic	not near genes	chr3L	22580024	intergenic	not near genes	chr3L	22582430	3` UTR	CG14459 -	chr3L_7_22580001	chr3L_22580001	RC5_1-HE
1676	chr3L	22617187	22617219	chr3L	22624640	22624672	blood	11	7453	4.5	4.0	4.2	2.1	7485	chr3L	22617187	intron	CG14459 -	chr3L	22620930	intron	CG14459 -	chr3L	22624672	intron	CG14459 -	chr3L_11_22620001	chr3L_22620001	RC5_1-HE
1679	chr3L	22761391	22761422	chr3L	22766826	22766848	Ivk	16	5434	6.5	8.0	7.2	2.0	5457	chr3L	22761391	intron	SPoCk +	chr3L	22764120	intron	SPoCk +	chr3L	22766848	intron	SPoCk +	chr3L_16_22760001	chr3L_22760001	RC5_1-HE
1680	chr3L	22865989	22866013	chr3L	22867123	22867147	Doc	5	1134	0.5	2.5	1.5	2.0	1158	chr3L	22865989	intron	CG33170 +	chr3L	22866568	intron	CG33170 +	chr3L	22867147	intron	CG33170 +	chr3L_5_22865001	chr3L_22865001	RC5_1-HE
1687	chr3L	22989863	22989888	chr3L	22996838	22996863	297	11	6974	5.0	4.5	4.8	1.9	7000	chr3L	22989863	intergenic	not near genes	chr3L	22993363	intergenic	not near genes	chr3L	22996863	intergenic	not near genes	chr3L_11_22990001	chr3L_22990001	RC5_1-HE
1689	chr3L	23042223	23042259	chr3L	23048977	23049002	gypsy6	15	6752	3.0	2.5	2.8	3.9	6779	chr3L	23042223	intergenic	not near genes	chr3L	23045612	intergenic	not near genes	chr3L	23049002	intergenic	not near genes	chr3L_15_23045001	chr3L_23045001	RC5_1-HE
1692	chr3L	23290482	23290495	chr3L	23295316	23295329	X-element	13	4833	15.0	7.5	11.2	1.1	4847	chr3L	23290482	intergenic	not near genes	chr3L	23292906	intergenic	not near genes	chr3L	23295329	intergenic	not near genes	chr3L_13_23290001	chr3L_23290001	RC5_1-HE
1693	chr3L	23290496	23290516	chr3L	23295314	23295350	X-element	13	4833	8.0	7.5	7.8	1.5	4854	chr3L	23290496	intergenic	not near genes	chr3L	23292923	intergenic	not near genes	chr3L	23295350	intergenic	not near genes	chr3L_13_23290001	chr3L_23290001	RC5_1-HE
1697	chr3L	23491400	23491409	chr3L	23491672	23491681	INE-1	5	273	34.0	30.0	32.0	0.2	281	chr3L	23491400	intergenic	not near genes	chr3L	23491540	intergenic	not near genes	chr3L	23491681	intergenic	not near genes	chr3L_5_23490001	chr3L_23490001	RC5_1-HE
1700	chr3L	23535632	23535656	chr3L	23678987	23678993	Bica	4	143347	34.5	33.5	34.0	0.1	143361	chr3L	23535632	intergenic	not near genes	chr3L	23607312	intron	AGO3 +	chr3L	23678993	intron	AGO3 +	chr3L_4_23605001	chr3L_23605001	RC5_1-HE
1706	chr3L	24012406	24012436	chr3L	24020748	24020778	roo	4	8342	2.0	3.0	2.5	1.1	8372	chr3L	24012406	intergenic	not near genes	chr3L	24016592	intergenic	not near genes	chr3L	24020778	intergenic	not near genes	chr3L_4_24015001	chr3L_24015001	RC5_1-HE
1707	chr3L	24021279	24021314	chr3L	24022437	24022472	1360	11	1154	1.5	1.0	1.2	5.0	1193	chr3L	24021279	intergenic	not near genes	chr3L	24021876	intergenic	not near genes	chr3L	24022472	intergenic	not near genes	chr3L_11_24020001	chr3L_24020001	RC5_1-HE
1708	chr3L	24168789	24168820	chr3L	24176117	24176123	ZAM	8	7325	3.0	7.5	5.2	1.3	7334	chr3L	24168789	intron	Snap25 +	chr3L	24172456	intron	Snap25 +	chr3L	24176123	intron	Snap25 +	chr3L_8_24170001	chr3L_24170001	RC5_1-HE
1710	chr3L	24791898	24791923	chr3L	24796678	24796703	Doc	11	4779	6.0	9.0	7.5	1.3	4805	chr3L	24791898	intergenic	not near genes	chr3L	24794300	intergenic	not near genes	chr3L	24796703	intergenic	not near genes	chr3L_11_24790001	chr3L_24790001	RC5_1-HE
1716	chr3L	25628498	25628531	chr3L	25633270	25633290	F-element	13	4771	3.5	4.0	3.8	2.7	4792	chr3L	25628498	intron	CG41343 -	chr3L	25630894	intron	CG41343 -	chr3L	25633290	intron	CG41343 -	chr3L_13_25630001	chr3L_25630001	RC5_1-HE
1722	chr3L	27727639	27727657	chr3L	27728747	27728749	G-element	16	1106	16.0	6.5	11.2	1.3	1110	chr3L	27727639	intergenic	not near genes	chr3L	27728194	intergenic	not near genes	chr3L	27728749	intergenic	not near genes	chr3L_16_27725001	chr3L_27725001	RC5_1-HE
1724	chr3L	27980697	27980731	chr3L	27985495	27985530	Doc	4	4799	0.0	4.0	2.0	1.3	4833	chr3L	27980697	intron	CG17514 -	chr3L	27983114	intron	CG17514 -	chr3L	27985530	intron	CG17514 -	chr3L_4_27980001	chr3L_27980001	RC5_1-HE
1732	chr3R	1511855	1511860	chr3R	2516774	2516778	297	5	1004918	19.0	24.0	21.5	0.2	1004923	chr3R	1511855	intergenic	not near genes	chr3R	2014316	intergenic	not near genes	chr3R	2516778	intergenic	not near genes	chr3R_5_2010001	chr3R_2010001	RC5_1-HE
1738	chr3R	4105042	4105064	chr3R	4110247	4110269	copia	4	5205	3.5	1.5	2.5	1.1	5227	chr3R	4105042	intergenic	not near genes	chr3R	4107656	intergenic	not near genes	chr3R	4110269	intergenic	not near genes	chr3R_4_4105001	chr3R_4105001	RC5_1-HE
1741	chr3R	4206080	4206098	chr3R	4211649	4211674	mdg3	4	5574	1.5	1.5	1.5	1.6	5594	chr3R	4206080	intron	CG14636 -	chr3R	4208877	intron	CG14636 -	chr3R	4211674	intron	CG14636 -	chr3R_4_4205001	chr3R_4205001	RC5_1-HE
1743	chr3R	4366759	4366774	chr3R	4375143	4375158	roo	5	8384	5.5	5.5	5.5	0.8	8399	chr3R	4366759	3` UTR	CG1090 +	chr3R	4370958	intergenic	not near genes	chr3R	4375158	5` UTR	CR44922 +	chr3R_5_4370001	chr3R_4370001	RC5_1-HE
1744	chr3R	4366780	4366791	chr3R	4375140	4375175	roo	4	8378	1.5	4.5	3.0	1.0	8395	chr3R	4366780	3` UTR	CG1090 +	chr3R	4370978	intergenic	not near genes	chr3R	4375175	5` UTR	CR44922 +	chr3R_4_4370001	chr3R_4370001	RC5_1-HE
1745	chr3R	4408410	4408439	chr3R	4412715	4412744	Juan	5	4305	5.0	3.5	4.2	1.0	4334	chr3R	4408410	intron	CG32944 -	chr3R	4410577	intron	CG32944 -	chr3R	4412744	intron	CG32944 -	chr3R_5_4410001	chr3R_4410001	RC5_1-HE
1748	chr3R	4538903	4538911	chr3R	4540142	4540172	1360	10	1258	1.0	9.5	5.2	1.6	1269	chr3R	4538903	intron	CG34357 -	chr3R	4539538	intron	CG34357 -	chr3R	4540172	intron	CG34357 -	chr3R_10_4535001	chr3R_4535001	RC5_1-HE
1749	chr3R	4609545	4609582	chr3R	4610710	4610747	1360	21	1165	6.5	7.0	6.8	2.7	1202	chr3R	4609545	intergenic	not near genes	chr3R	4610146	intergenic	not near genes	chr3R	4610747	intergenic	not near genes	chr3R_21_4610001	chr3R_4610001	RC5_1-HE
1750	chr3R	4683177	4683208	chr3R	4684937	4684968	S-element	16	1758	5.5	2.5	4.0	3.2	1791	chr3R	4683177	intron	CG43427 +	chr3R	4684072	intron	CG43427 +	chr3R	4684968	intron	CG43427 +	chr3R_16_4680001	chr3R_4680001	RC5_1-HE
1752	chr3R	4753240	4753266	chr3R	4757544	4757569	F-element	10	4303	4.5	3.0	3.8	2.1	4329	chr3R	4753240	intron,intron	atms +,CG44098 -	chr3R	4755404	intron,intron	atms +,CG44098 -	chr3R	4757569	intron,exon	atms +,CG44098 -	chr3R_10_4755001	chr3R_4755001	RC5_1-HE
1753	chr3R	4759737	4759744	chr3R	4761214	4761242	hopper2	5	1491	2.0	3.0	2.5	1.4	1505	chr3R	4759737	intron,intron	atms +,CG44098 -	chr3R	4760490	intron,intron	atms +,CG44098 -	chr3R	4761242	intron,intron	atms +,CG44098 -	chr3R_5_4760001	chr3R_4760001	RC5_1-HE
1761	chr3R	5045842	5045871	chr3R	5052945	5052974	HMS-Beagle	8	7103	5.0	0.5	2.8	2.1	7132	chr3R	5045842	intron	CR43635 -	chr3R	5049408	intergenic	not near genes	chr3R	5052974	intergenic	CR45588 -	chr3R_8_5045001	chr3R_5045001	RC5_1-HE
1762	chr3R	5067979	5068014	chr3R	5073497	5073532	mdg3	15	5518	2.5	4.0	3.2	3.6	5553	chr3R	5067979	intergenic	not near genes	chr3R	5070756	intergenic	not near genes	chr3R	5073532	intergenic	not near genes	chr3R_15_5070001	chr3R_5070001	RC5_1-HE
1768	chr3R	5338398	5338430	chr3R	5343576	5343607	Rt1c	11	5178	5.5	7.5	6.5	1.5	5209	chr3R	5338398	intron	mtd -	chr3R	5341002	intron	mtd -	chr3R	5343607	intron	mtd -	chr3R_11_5340001	chr3R_5340001	RC5_1-HE
1769	chr3R	5445963	5445993	chr3R	5452424	5452454	Burdock	7	6459	2.5	4.0	3.2	1.7	6491	chr3R	5445963	intron	CG14669 +	chr3R	5449208	intron	CG14669 +	chr3R	5452454	intron	CG14669 +	chr3R_7_5445001	chr3R_5445001	RC5_1-HE
1772	chr3R	5809117	5809134	chr3R	5809368	5809384	pogo	10	251	3.5	2.0	2.8	2.6	267	chr3R	5809117	3` UTR	CG11000 +	chr3R	5809250	3` UTR	CG11000 +	chr3R	5809384	3` UTR	CG11000 +	chr3R_10_5805001	chr3R_5805001	RC5_1-HE
1773	chr3R	5822378	5822396	chr3R	5823546	5823564	1360	4	1168	2.0	3.0	2.5	1.1	1186	chr3R	5822378	3` UTR	CG2023 -	chr3R	5822971	3` UTR	CG2023 -	chr3R	5823564	3` UTR	CG2023 -	chr3R_4_5820001	chr3R_5820001	RC5_1-HE
1774	chr3R	5927570	5927587	chr3R	5927811	5927828	pogo	6	240	1.5	3.5	2.5	1.7	258	chr3R	5927570	intron	CG34113 -	chr3R	5927699	intron	CG34113 -	chr3R	5927828	intron	CG34113 -	chr3R_6_5925001	chr3R_5925001	RC5_1-HE
1776	chr3R	6015977	6015992	chr3R	6024447	6024474	Tirant	5	8471	1.5	3.0	2.2	1.6	8497	chr3R	6015977	intergenic	not near genes	chr3R	6020226	intergenic	not near genes	chr3R	6024474	intergenic	not near genes	chr3R_5_6020001	chr3R_6020001	RC5_1-HE
1777	chr3R	6121166	6121189	chr3R	6121385	6121408	BS	12	219	0.5	1.0	0.8	6.7	242	chr3R	6121166	intergenic	not near genes	chr3R	6121287	intergenic	not near genes	chr3R	6121408	intergenic	not near genes	chr3R_12_6120001	chr3R_6120001	RC5_1-HE
1779	chr3R	6175180	6175204	chr3R	6182453	6182477	HMS-Beagle2	6	7272	3.5	1.0	2.2	1.9	7297	chr3R	6175180	intergenic	Osi1 +	chr3R	6178828	intron	CR45194 +	chr3R	6182477	intergenic	CR45194 +	chr3R_6_6175001	chr3R_6175001	RC5_1-HE
1781	chr3R	6206288	6206312	chr3R	6206506	6206530	BS	12	218	3.5	6.0	4.8	2.1	242	chr3R	6206288	exon	Osi24 +	chr3R	6206409	intron	Osi24 +	chr3R	6206530	intron	Osi24 +	chr3R_12_6205001	chr3R_6205001	RC5_1-HE
1785	chr3R	6510025	6510051	chr3R	6515107	6515133	jockey	8	5082	6.5	3.5	5.0	1.3	5108	chr3R	6510025	intergenic	not near genes	chr3R	6512579	intergenic	not near genes	chr3R	6515133	intergenic	not near genes	chr3R_8_6510001	chr3R_6510001	RC5_1-HE
1792	chr3R	6737496	6737528	chr3R	6739284	6739316	Doc	13	1788	4.0	5.0	4.5	2.4	1820	chr3R	6737496	intron	pb -	chr3R	6738406	intron	pb -	chr3R	6739316	intron	pb -	chr3R_13_6735001	chr3R_6735001	RC5_1-HE
1817	chr3R	7694582	7694603	chr3R	7713655	7713676	invader3	9	19073	5.5	5.0	5.2	1.5	19094	chr3R	7694582	3` UTR	Nlg1 +	chr3R	7704129	intergenic	not near genes	chr3R	7713676	intergenic	not near genes	chr3R_9_7700001	chr3R_7700001	RC5_1-HE
1818	chr3R	7729471	7729495	chr3R	7737410	7737434	Stalker2	6	7939	7.5	10.0	8.8	0.6	7963	chr3R	7729471	intergenic	not near genes	chr3R	7733452	intergenic	not near genes	chr3R	7737434	intergenic	not near genes	chr3R_6_7730001	chr3R_7730001	RC5_1-HE
1819	chr3R	7849641	7849675	chr3R	7850809	7850843	1360	12	1168	0.5	4.0	2.2	3.8	1202	chr3R	7849641	intron	CG34384 +	chr3R	7850242	intron	CG34384 +	chr3R	7850843	intron	CG34384 +	chr3R_12_7850001	chr3R_7850001	RC5_1-HE
1821	chr3R	7973315	7973349	chr3R	7974378	7974410	1360	4	1064	3.5	1.5	2.5	1.1	1095	chr3R	7973315	intergenic	not near genes	chr3R	7973862	intergenic	not near genes	chr3R	7974410	3` UTR	CD98hc -	chr3R_4_7970001	chr3R_7970001	RC5_1-HE
1822	chr3R	8090564	8090569	chr3R	8094042	8094047	297	4	3478	4.0	9.5	6.8	0.5	3483	chr3R	8090564	intergenic	CR44330 +	chr3R	8092306	intergenic	not near genes	chr3R	8094047	intergenic	CG7900 +	chr3R_4_8090001	chr3R_8090001	RC5_1-HE
1823	chr3R	8094406	8094440	chr3R	8099712	8099746	Transpac	9	5306	2.0	2.0	2.0	3.0	5340	chr3R	8094406	intron	CG7900 +	chr3R	8097076	intron	CG7900 +	chr3R	8099746	intron	CG7900 +	chr3R_9_8095001	chr3R_8095001	RC5_1-HE
1824	chr3R	8101762	8101784	chr3R	8104847	8104869	G2	6	3083	2.5	2.0	2.2	1.9	3107	chr3R	8101762	exon	CG7900 +	chr3R	8103316	intron	CG7900 +	chr3R	8104869	3` UTR	CG7900 +	chr3R_6_8100001	chr3R_8100001	RC5_1-HE
1827	chr3R	8207552	8207582	chr3R	8208398	8208428	F-element	5	843	1.5	2.5	2.0	1.7	876	chr3R	8207552	intergenic	not near genes	chr3R	8207990	intergenic	not near genes	chr3R	8208428	intergenic	not near genes	chr3R_5_8205001	chr3R_8205001	RC5_1-HE
1828	chr3R	8403006	8403040	chr3R	8412173	8412206	roo	37	9166	9.5	10.0	9.8	3.4	9200	chr3R	8403006	intron	CG45263 -	chr3R	8407606	intron	CG45263 -	chr3R	8412206	intron	CG45263 -	chr3R_37_8405001	chr3R_8405001	RC5_1-HE
1832	chr3R	8570476	8570507	chr3R	8575113	8575114	HMS-Beagle	6	4629	4.5	1.0	2.8	1.6	4638	chr3R	8570476	intergenic	not near genes	chr3R	8572795	intergenic	not near genes	chr3R	8575114	intergenic	not near genes	chr3R_6_8570001	chr3R_8570001	RC5_1-HE
1833	chr3R	8601779	8601798	chr3R	8610933	8610952	roo	7	9154	6.0	7.0	6.5	0.9	9173	chr3R	8601779	intron	5-HT2B +	chr3R	8606366	intron	5-HT2B +	chr3R	8610952	intron	5-HT2B +	chr3R_7_8605001	chr3R_8605001	RC5_1-HE
1835	chr3R	8707359	8707383	chr3R	8709801	8709825	jockey	9	2441	2.0	5.5	3.8	1.9	2466	chr3R	8707359	intergenic	not near genes	chr3R	8708592	intergenic	not near genes	chr3R	8709825	intergenic	not near genes	chr3R_9_8705001	chr3R_8705001	RC5_1-HE
1842	chr3R	8894870	8894905	chr3R	8896027	8896062	1360	19	1156	2.5	6.5	4.5	3.5	1192	chr3R	8894870	intron	pyd -	chr3R	8895466	intron	pyd -	chr3R	8896062	intron	pyd -	chr3R_19_8895001	chr3R_8895001	RC5_1-HE
1843	chr3R	8898189	8898201	chr3R	8913805	8913817	297	4	15614	4.0	6.5	5.2	0.6	15628	chr3R	8898189	intron	pyd -	chr3R	8906003	intron	pyd -	chr3R	8913817	intron	pyd -	chr3R_4_8905001	chr3R_8905001	RC5_1-HE
1849	chr3R	9278781	9278815	chr3R	9284042	9284059	Rt1a	9	5259	0.0	4.5	2.2	2.8	5278	chr3R	9278781	intergenic	not near genes	chr3R	9281420	intergenic	not near genes	chr3R	9284059	intergenic	not near genes	chr3R_9_9280001	chr3R_9280001	RC5_1-HE
1850	chr3R	9319571	9319599	chr3R	9320007	9320035	jockey	9	436	7.5	6.0	6.8	1.2	464	chr3R	9319571	intron	CG8861 -	chr3R	9319803	intron	CG8861 -	chr3R	9320035	intron	CG8861 -	chr3R_9_9315001	chr3R_9315001	RC5_1-HE
1852	chr3R	9361816	9361845	chr3R	9362058	9362087	pogo	6	242	2.0	3.0	2.5	1.7	271	chr3R	9361816	3` UTR	CG45050 +	chr3R	9361952	3` UTR	CG45050 +	chr3R	9362087	3` UTR	CG45050 +	chr3R_6_9360001	chr3R_9360001	RC5_1-HE
1855	chr3R	9699977	9699997	chr3R	9700066	9700087	1360	8	90	4.0	4.5	4.2	1.5	110	chr3R	9699977	intron	Unc-115a -	chr3R	9700032	intron	Unc-115a -	chr3R	9700087	intron	Unc-115a -	chr3R_8_9700001	chr3R_9700001	RC5_1-HE
1865	chr3R	10231780	10231815	chr3R	10237358	10237393	mdg3	13	5577	2.5	3.5	3.0	3.2	5613	chr3R	10231780	intron	CG42795 +	chr3R	10234586	intron	CG42795 +	chr3R	10237393	intron	CG42795 +	chr3R_13_10230001	chr3R_10230001	RC5_1-HE
1879	chr3R	10804187	10804207	chr3R	10811720	10811740	17.6	6	7533	0.0	6.0	3.0	1.5	7553	chr3R	10804187	intergenic	CG14692 -	chr3R	10807964	intergenic	not near genes	chr3R	10811740	3` UTR	CG14693 -	chr3R_6_10805001	chr3R_10805001	RC5_1-HE
1886	chr3R	11065601	11065618	chr3R	11071245	11071273	297	6	5651	2.0	5.5	3.8	1.2	5672	chr3R	11065601	intergenic	not near genes	chr3R	11068437	intergenic	not near genes	chr3R	11071273	intergenic	not near genes	chr3R_6_11065001	chr3R_11065001	RC5_1-HE
1896	chr3R	11379234	11379269	chr3R	11388390	11388425	roo	19	9155	5.5	11.0	8.2	2.1	9191	chr3R	11379234	intron	pros +	chr3R	11383830	intron	pros +	chr3R	11388425	intron	pros +	chr3R_19_11380001	chr3R_11380001	RC5_1-HE
1907	chr3R	11841061	11841078	chr3R	11846253	11846270	BS	6	5192	7.5	3.0	5.2	1.0	5209	chr3R	11841061	intron	CG6959 -	chr3R	11843666	intron	CG6959 -	chr3R	11846270	intron	CG6959 -	chr3R_6_11840001	chr3R_11840001	RC5_1-HE
1908	chr3R	11841082	11841100	chr3R	11846251	11846292	BS	16	5187	2.0	3.0	2.5	4.6	5210	chr3R	11841082	intron	CG6959 -	chr3R	11843687	intron	CG6959 -	chr3R	11846292	intron	CG6959 -	chr3R_16_11840001	chr3R_11840001	RC5_1-HE
1914	chr3R	12022889	12022903	chr3R	12025067	12025081	pogo	6	2178	3.5	3.5	3.5	1.3	2192	chr3R	12022889	intergenic	not near genes	chr3R	12023985	intergenic	not near genes	chr3R	12025081	intergenic	not near genes	chr3R_6_12020001	chr3R_12020001	RC5_1-HE
1925	chr3R	12920160	12920186	chr3R	12925364	12925390	copia	17	5201	5.0	10.5	7.8	1.9	5230	chr3R	12920160	intron	beat-Vb +	chr3R	12922775	intron	beat-Vb +	chr3R	12925390	intron	beat-Vb +	chr3R_17_12920001	chr3R_12920001	RC5_1-HE
1928	chr3R	13143038	13143065	chr3R	13148615	13148641	mdg3	10	5574	3.0	6.5	4.8	1.7	5603	chr3R	13143038	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13145840	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13148641	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R_10_13145001	chr3R_13145001	RC5_1-HE
1948	chr3R	14021640	14021652	chr3R	14023466	14023478	S-element	7	1826	3.0	3.0	3.0	1.8	1838	chr3R	14021640	intron	rdx -	chr3R	14022559	intron	rdx -	chr3R	14023478	intron	rdx -	chr3R_7_14020001	chr3R_14020001	RC5_1-HE
1953	chr3R	14180811	14180831	chr3R	14185577	14185597	F-element	15	4766	9.0	0.0	4.5	2.7	4786	chr3R	14180811	intron	Dop1R1 -	chr3R	14183204	intron	Dop1R1 -	chr3R	14185597	intron	Dop1R1 -	chr3R_15_14180001	chr3R_14180001	RC5_1-HE
1955	chr3R	14246392	14246408	chr3R	14247889	14247905	jockey	6	1497	4.0	1.5	2.8	1.6	1513	chr3R	14246392	intergenic	not near genes	chr3R	14247148	intergenic	not near genes	chr3R	14247905	intergenic	not near genes	chr3R_6_14245001	chr3R_14245001	RC5_1-HE
1975	chr3R	15041425	15041460	chr3R	15045194	15045229	Doc	21	3769	3.5	5.5	4.5	3.8	3804	chr3R	15041425	intergenic	not near genes	chr3R	15043327	intergenic	not near genes	chr3R	15045229	intergenic	not near genes	chr3R_21_15040001	chr3R_15040001	RC5_1-HE
1978	chr3R	15079808	15079829	chr3R	15080050	15080071	pogo	7	242	2.5	6.5	4.5	1.3	263	chr3R	15079808	3` UTR	CG6966 -	chr3R	15079940	3` UTR	CG6966 -	chr3R	15080071	3` UTR	CG6966 -	chr3R_7_15075001	chr3R_15075001	RC5_1-HE
1979	chr3R	15102521	15102530	chr3R	15109776	15109785	412	6	7255	3.5	4.0	3.8	1.2	7264	chr3R	15102521	intron	CG42788 -	chr3R	15106153	intron	CG42788 -	chr3R	15109785	intron	CG42788 -	chr3R_6_15105001	chr3R_15105001	RC5_1-HE
1981	chr3R	15132056	15132068	chr3R	15135117	15135129	Juan	4	3061	13.5	7.5	10.5	0.3	3073	chr3R	15132056	intergenic	CG42788 -	chr3R	15133592	intergenic	not near genes	chr3R	15135129	intergenic	CG6912 -	chr3R_4_15130001	chr3R_15130001	RC5_1-HE
1982	chr3R	15132069	15132077	chr3R	15135114	15135138	Juan	4	3054	9.5	7.5	8.5	0.4	3069	chr3R	15132069	intergenic	CG42788 -	chr3R	15133604	intergenic	not near genes	chr3R	15135138	3` UTR	CG6912 -	chr3R_4_15130001	chr3R_15130001	RC5_1-HE
1983	chr3R	15162547	15162564	chr3R	15167315	15167332	F-element	7	4768	5.5	0.0	2.8	1.8	4785	chr3R	15162547	intron	Gyc88E +	chr3R	15164940	intron	Gyc88E +	chr3R	15167332	intron	Gyc88E +	chr3R_7_15160001	chr3R_15160001	RC5_1-HE
1988	chr3R	15601162	15601188	chr3R	15608685	15608711	412	8	7523	11.0	7.5	9.2	0.8	7549	chr3R	15601162	intergenic	not near genes	chr3R	15604936	intergenic	not near genes	chr3R	15608711	intergenic	not near genes	chr3R_8_15600001	chr3R_15600001	RC5_1-HE
1989	chr3R	15618746	15618757	chr3R	15626221	15626232	blood	7	7475	4.5	3.0	3.8	1.5	7486	chr3R	15618746	intergenic	not near genes	chr3R	15622489	intergenic	not near genes	chr3R	15626232	intergenic	not near genes	chr3R_7_15620001	chr3R_15620001	RC5_1-HE
2005	chr3R	16189417	16189443	chr3R	16189821	16189847	invader4	6	404	5.5	2.5	4.0	1.2	430	chr3R	16189417	intron	sra +	chr3R	16189632	intron	sra +	chr3R	16189847	intron	sra +	chr3R_6_16185001	chr3R_16185001	RC5_1-HE
2013	chr3R	16756316	16756349	chr3R	16762508	16762541	diver	17	6192	4.5	2.0	3.2	4.0	6225	chr3R	16756316	intron	bxd -	chr3R	16759428	intron	bxd -	chr3R	16762541	intron	bxd -	chr3R_17_16755001	chr3R_16755001	RC5_1-HE
2029	chr3R	17294669	17294698	chr3R	17295098	17295127	BS	10	429	3.5	3.0	3.2	2.4	458	chr3R	17294669	intergenic	not near genes	chr3R	17294898	intergenic	not near genes	chr3R	17295127	intergenic	not near genes	chr3R_10_17290001	chr3R_17290001	RC5_1-HE
2032	chr3R	17346691	17346719	chr3R	17348258	17348286	F-element	14	1567	4.5	5.0	4.8	2.4	1595	chr3R	17346691	intron	beat-IIa -	chr3R	17347488	intron	beat-IIa -	chr3R	17348286	intron	beat-IIa -	chr3R_14_17345001	chr3R_17345001	RC5_1-HE
2039	chr3R	17591288	17591323	chr3R	17591724	17591760	F-element	10	437	3.0	3.0	3.0	2.5	472	chr3R	17591288	intergenic	not near genes	chr3R	17591524	intergenic	not near genes	chr3R	17591760	intergenic	not near genes	chr3R_10_17590001	chr3R_17590001	RC5_1-HE
2049	chr3R	17925853	17925888	chr3R	17927321	17927356	hobo	28	1465	5.0	10.5	7.8	3.2	1503	chr3R	17925853	intron	cpo +	chr3R	17926604	intron	cpo +	chr3R	17927356	intron	cpo +	chr3R_28_17925001	chr3R_17925001	RC5_1-HE
2053	chr3R	18032786	18032807	chr3R	18040460	18040481	opus	11	7674	0.0	5.0	2.5	3.1	7695	chr3R	18032786	intergenic	not near genes	chr3R	18036634	intergenic	not near genes	chr3R	18040481	intergenic	not near genes	chr3R_11_18035001	chr3R_18035001	RC5_1-HE
2054	chr3R	18061582	18061613	chr3R	18063151	18063182	F-element	18	1569	4.0	3.0	3.5	4.0	1600	chr3R	18061582	intergenic	not near genes	chr3R	18062382	intergenic	not near genes	chr3R	18063182	intergenic	not near genes	chr3R_18_18060001	chr3R_18060001	RC5_1-HE
2069	chr3R	18606520	18606529	chr3R	18610743	18610752	F-element	7	4223	0.5	0.0	0.2	5.8	4232	chr3R	18606520	intron,intron	qin +,CG14304 -	chr3R	18608636	intron,intron	qin +,CG14304 -	chr3R	18610752	intron,intron	qin +,CG14304 -	chr3R_7_18605001	chr3R_18605001	RC5_1-HE
2086	chr3R	19193011	19193013	chr3R	19197304	19197318	F-element	4	4302	0.0	6.5	3.2	1.0	4307	chr3R	19193011	intron	CG31475 +	chr3R	19195164	intron	CG31475 +	chr3R	19197318	intron	CG31475 +	chr3R_4_19195001	chr3R_19195001	RC5_1-HE
2117	chr3R	20109537	20109571	chr3R	20114744	20114778	copia	21	5207	6.0	5.5	5.8	3.1	5241	chr3R	20109537	intergenic	not near genes	chr3R	20112158	intergenic	not near genes	chr3R	20114778	intergenic	CG10887 +	chr3R_21_20110001	chr3R_20110001	RC5_1-HE
2119	chr3R	20156690	20156694	chr3R	20165861	20165865	roo	5	9171	10.0	5.5	7.8	0.6	9175	chr3R	20156690	intergenic	not near genes	chr3R	20161278	intergenic	not near genes	chr3R	20165865	intergenic	not near genes	chr3R_5_20160001	chr3R_20160001	RC5_1-HE
2120	chr3R	20156695	20156715	chr3R	20165859	20165886	roo	11	9170	8.0	5.5	6.8	1.4	9191	chr3R	20156695	intergenic	not near genes	chr3R	20161290	intergenic	not near genes	chr3R	20165886	intergenic	not near genes	chr3R_11_20160001	chr3R_20160001	RC5_1-HE
2123	chr3R	20245283	20245299	chr3R	20248906	20248922	F-element	5	3623	2.5	1.5	2.0	1.7	3639	chr3R	20245283	3` UTR	Nlg4 +	chr3R	20247102	intergenic	not near genes	chr3R	20248922	intergenic	not near genes	chr3R_5_20245001	chr3R_20245001	RC5_1-HE
2126	chr3R	20266518	20266547	chr3R	20272990	20273019	Burdock	12	6472	1.5	10.5	6.0	1.7	6501	chr3R	20266518	intron	cic +	chr3R	20269768	intron	cic +	chr3R	20273019	intron	cic +	chr3R_12_20265001	chr3R_20265001	RC5_1-HE
2128	chr3R	20330997	20331032	chr3R	20331484	20331519	roo	5	487	2.0	2.5	2.2	1.6	522	chr3R	20330997	intergenic	Sirt2 +	chr3R	20331258	intergenic	Sirt2 +	chr3R	20331519	intergenic	not near genes	chr3R_5_20330001	chr3R_20330001	RC5_1-HE
2135	chr3R	20506587	20506615	chr3R	20507391	20507419	BS	10	803	3.0	7.0	5.0	1.7	832	chr3R	20506587	intergenic	Or92a +	chr3R	20507003	intergenic	CG4288 -	chr3R	20507419	3` UTR	CG4288 -	chr3R_10_20505001	chr3R_20505001	RC5_1-HE
2136	chr3R	20513001	20513036	chr3R	20515705	20515740	opus	11	2704	4.5	2.0	3.2	2.6	2739	chr3R	20513001	intergenic	not near genes	chr3R	20514370	intergenic	not near genes	chr3R	20515740	intergenic	not near genes	chr3R_11_20510001	chr3R_20510001	RC5_1-HE
2164	chr3R	21761117	21761155	chr3R	21768509	21768548	mdg1	6	7393	2.0	1.5	1.8	2.1	7431	chr3R	21761117	exon	CG42335 +	chr3R	21764832	intron	CG42335 +	chr3R	21768548	exon	CG42335 +	chr3R_6_21760001	chr3R_21760001	RC5_1-HE
2178	chr3R	22234701	22234711	chr3R	22236002	22236031	pogo	5	1316	0.0	3.5	1.8	1.8	1330	chr3R	22234701	intron	SKIP +	chr3R	22235366	intron	SKIP +	chr3R	22236031	intron	SKIP +	chr3R_5_22235001	chr3R_22235001	RC5_1-HE
2179	chr3R	22239495	22239499	chr3R	22248556	22248560	roo	4	9061	11.5	0.0	5.8	0.6	9065	chr3R	22239495	intron	SKIP +	chr3R	22244028	intron	SKIP +	chr3R	22248560	intron	SKIP +	chr3R_4_22240001	chr3R_22240001	RC5_1-HE
2181	chr3R	22450555	22450579	chr3R	22453196	22453220	NOF	5	2641	3.5	6.0	4.8	0.9	2665	chr3R	22450555	intron	CG34376 +	chr3R	22451888	intron	CG34376 +	chr3R	22453220	intron	CG34376 +	chr3R_5_22450001	chr3R_22450001	RC5_1-HE
2190	chr3R	22881198	22881217	chr3R	22884905	22884908	Doc	8	3705	6.0	1.0	3.5	1.8	3710	chr3R	22881198	intergenic	not near genes	chr3R	22883053	intergenic	not near genes	chr3R	22884908	intergenic	not near genes	chr3R_8_22880001	chr3R_22880001	RC5_1-HE
2206	chr3R	23558405	23558428	chr3R	23560187	23560210	Bari1	7	1782	3.0	2.0	2.5	2.0	1805	chr3R	23558405	intron	beat-IV +	chr3R	23559308	intron	beat-IV +	chr3R	23560210	intron	beat-IV +	chr3R_7_23555001	chr3R_23555001	RC5_1-HE
2209	chr3R	23684696	23684717	chr3R	23685183	23685204	roo	5	485	4.5	3.5	4.0	1.0	508	chr3R	23684696	exon	CG18754 +	chr3R	23684950	intron	CG18754 +	chr3R	23685204	exon	CG18754 +	chr3R_5_23680001	chr3R_23680001	RC5_1-HE
2221	chr3R	24072083	24072114	chr3R	24072522	24072553	jockey	16	437	8.0	9.0	8.5	1.7	470	chr3R	24072083	intron	4EHP -	chr3R	24072318	intron	4EHP -	chr3R	24072553	intron	4EHP -	chr3R_16_24070001	chr3R_24070001	RC5_1-HE
2222	chr3R	24076916	24076944	chr3R	24078384	24078412	hobo	10	1468	3.0	4.5	3.8	2.1	1496	chr3R	24076916	intron	4EHP -	chr3R	24077664	intron	4EHP -	chr3R	24078412	intron	4EHP -	chr3R_10_24075001	chr3R_24075001	RC5_1-HE
2225	chr3R	24207227	24207244	chr3R	24212304	24212320	flea	7	5077	3.0	5.0	4.0	1.4	5093	chr3R	24207227	intron	twin -	chr3R	24209774	intron	twin -	chr3R	24212320	intron	twin -	chr3R_7_24205001	chr3R_24205001	RC5_1-HE
2230	chr3R	24493274	24493282	chr3R	24493504	24493512	BS	8	230	12.0	8.0	10.0	0.7	238	chr3R	24493274	intergenic	not near genes	chr3R	24493393	intergenic	not near genes	chr3R	24493512	intergenic	not near genes	chr3R_8_24490001	chr3R_24490001	RC5_1-HE
2231	chr3R	24493283	24493306	chr3R	24493500	24493536	BS	24	229	7.5	7.0	7.2	2.9	253	chr3R	24493283	intergenic	not near genes	chr3R	24493410	intergenic	not near genes	chr3R	24493536	intergenic	not near genes	chr3R_24_24490001	chr3R_24490001	RC5_1-HE
2235	chr3R	24730096	24730119	chr3R	24732475	24732498	Doc	6	2379	3.5	0.0	1.8	2.1	2402	chr3R	24730096	intron	tok +	chr3R	24731297	intron	tok +	chr3R	24732498	intron	tok +	chr3R_6_24730001	chr3R_24730001	RC5_1-HE
2237	chr3R	24927120	24927158	chr3R	24931912	24931950	Doc	7	4792	3.5	1.0	2.2	2.2	4830	chr3R	24927120	intergenic	Trf4-2 +	chr3R	24929535	intergenic	not near genes	chr3R	24931950	intergenic	CG11771 +	chr3R_7_24925001	chr3R_24925001	RC5_1-HE
2250	chr3R	25832695	25832722	chr3R	25841878	25841905	roo	9	9181	3.5	6.5	5.0	1.5	9210	chr3R	25832695	exon	alpha4GT2 +	chr3R	25837300	intron	alpha4GT2 +	chr3R	25841905	exon	alpha4GT2 +	chr3R_9_25835001	chr3R_25835001	RC5_1-HE
2260	chr3R	26376322	26376356	chr3R	26385483	26385515	roo	9	9161	3.0	0.0	1.5	3.6	9193	chr3R	26376322	intergenic	not near genes	chr3R	26380918	intergenic	not near genes	chr3R	26385515	intergenic	not near genes	chr3R_9_26380001	chr3R_26380001	RC5_1-HE
2263	chr3R	26510498	26510525	chr3R	26519560	26519587	roo	11	9062	6.0	3.0	4.5	2.0	9089	chr3R	26510498	intron	plum -	chr3R	26515042	intron	plum -	chr3R	26519587	intron,5` UTR	plum -,CR45226 +	chr3R_11_26515001	chr3R_26515001	RC5_1-HE
2265	chr3R	26642742	26642758	chr3R	26643136	26643152	jockey	12	393	2.5	4.0	3.2	2.9	410	chr3R	26642742	intergenic	not near genes	chr3R	26642947	intergenic	not near genes	chr3R	26643152	intergenic	not near genes	chr3R_12_26640001	chr3R_26640001	RC5_1-HE
2269	chr3R	26810552	26810584	chr3R	26811038	26811070	roo	9	486	5.5	2.5	4.0	1.8	518	chr3R	26810552	intron	Tl +	chr3R	26810811	intron	Tl +	chr3R	26811070	intron	Tl +	chr3R_9_26810001	chr3R_26810001	RC5_1-HE
2274	chr3R	27007410	27007437	chr3R	27016546	27016563	roo	12	9135	4.0	4.5	4.2	2.3	9153	chr3R	27007410	intron	RYa-R +	chr3R	27011986	intron	RYa-R +	chr3R	27016563	intron	RYa-R +	chr3R_12_27010001	chr3R_27010001	RC5_1-HE
2280	chr3R	27140519	27140548	chr3R	27148130	27148159	412	8	7611	2.0	2.5	2.2	2.5	7640	chr3R	27140519	intron	CG6051 -	chr3R	27144339	intron	CG6051 -	chr3R	27148159	intron	CG6051 -	chr3R_8_27140001	chr3R_27140001	RC5_1-HE
2281	chr3R	27342794	27342825	chr3R	27351376	27351407	Tirant	6	8582	2.0	2.0	2.0	2.0	8613	chr3R	27342794	intron	CG42534 +	chr3R	27347100	intron	CG42534 +	chr3R	27351407	intron	CG42534 +	chr3R_6_27345001	chr3R_27345001	RC5_1-HE
2289	chr3R	27521157	27521189	chr3R	27530367	27530399	roo	5	9210	0.5	3.0	1.8	1.8	9242	chr3R	27521157	intron	CG12885 +	chr3R	27525778	intron	CG12885 +	chr3R	27530399	intron	CG12885 +	chr3R_5_27525001	chr3R_27525001	RC5_1-HE
2297	chr3R	27856758	27856791	chr3R	27858241	27858266	hopper2	18	1483	12.5	7.5	10.0	1.6	1508	chr3R	27856758	intron	CG34353 -	chr3R	27857512	intron	CG34353 -	chr3R	27858266	intron	CG34353 -	chr3R_18_27855001	chr3R_27855001	RC5_1-HE
2298	chr3R	27862955	27862962	chr3R	27868261	27868268	Transpac	6	5305	7.5	8.0	7.8	0.7	5313	chr3R	27862955	intron	CG34353 -	chr3R	27865612	intron	CG34353 -	chr3R	27868268	intron	CG34353 -	chr3R_6_27865001	chr3R_27865001	RC5_1-HE
2299	chr3R	27862963	27862987	chr3R	27868258	27868293	Transpac	7	5304	3.5	6.0	4.8	1.2	5330	chr3R	27862963	intron	CG34353 -	chr3R	27865628	intron	CG34353 -	chr3R	27868293	intron	CG34353 -	chr3R_7_27865001	chr3R_27865001	RC5_1-HE
2300	chr3R	27875697	27875732	chr3R	27882753	27882788	297	18	7056	5.5	4.5	5.0	3.0	7091	chr3R	27875697	intron	CG34353 -	chr3R	27879242	intron	CG34353 -	chr3R	27882788	intron	CG34353 -	chr3R_18_27875001	chr3R_27875001	RC5_1-HE
2306	chr3R	28068493	28068525	chr3R	28073936	28073968	I-element	7	5442	5.5	2.0	3.8	1.5	5475	chr3R	28068493	intron	CG34362 +	chr3R	28071230	intron	CG34362 +	chr3R	28073968	intron	CG34362 +	chr3R_7_28070001	chr3R_28070001	RC5_1-HE
2310	chr3R	28173673	28173703	chr3R	28181104	28181134	mdg1	12	7430	2.5	3.0	2.8	3.2	7461	chr3R	28173673	intron	CG34354 +	chr3R	28177404	intron	CG34354 +	chr3R	28181134	intron	CG34354 +	chr3R_12_28175001	chr3R_28175001	RC5_1-HE
2313	chr3R	28253346	28253371	chr3R	28255857	28255882	jockey	15	2510	2.0	7.5	4.8	2.6	2536	chr3R	28253346	intergenic	not near genes	chr3R	28254614	intergenic	not near genes	chr3R	28255882	intergenic	not near genes	chr3R_15_28250001	chr3R_28250001	RC5_1-HE
2315	chr3R	28302103	28302117	chr3R	28302546	28302560	jockey	4	443	3.0	3.5	3.2	1.0	457	chr3R	28302103	intergenic	not near genes	chr3R	28302332	intergenic	not near genes	chr3R	28302560	intergenic	not near genes	chr3R_4_28300001	chr3R_28300001	RC5_1-HE
2334	chr3R	29079377	29079410	chr3R	29080750	29080783	NOF	13	1373	3.5	5.0	4.2	2.5	1406	chr3R	29079377	intron	CG11873 +	chr3R	29080080	intron	CG11873 +	chr3R	29080783	intron	CG11873 +	chr3R_13_29080001	chr3R_29080001	RC5_1-HE
2344	chr3R	29406615	29406625	chr3R	29407902	29407912	jockey	5	1287	9.5	4.5	7.0	0.6	1297	chr3R	29406615	intron	Ptp99A +	chr3R	29407264	intron	Ptp99A +	chr3R	29407912	intron	Ptp99A +	chr3R_5_29405001	chr3R_29405001	RC5_1-HE
2345	chr3R	29406627	29406643	chr3R	29407898	29407930	jockey	8	1280	5.5	4.0	4.8	1.4	1303	chr3R	29406627	intron	Ptp99A +	chr3R	29407278	intron	Ptp99A +	chr3R	29407930	intron	Ptp99A +	chr3R_8_29405001	chr3R_29405001	RC5_1-HE
2349	chr3R	29738264	29738292	chr3R	29739732	29739760	hobo	8	1468	3.0	2.5	2.8	2.1	1496	chr3R	29738264	intergenic	CG1969 +,CG7598 +	chr3R	29739012	intron	CG1969 +	chr3R	29739760	5` UTR	CG1969 +	chr3R_8_29735001	chr3R_29735001	RC5_1-HE
2351	chr3R	29882019	29882051	chr3R	29891177	29891209	roo	6	9158	1.5	2.5	2.0	2.0	9190	chr3R	29882019	intron	CG31038 +	chr3R	29886614	intron	CG31038 +	chr3R	29891209	intron	CG31038 +	chr3R_6_29885001	chr3R_29885001	RC5_1-HE
2358	chr3R	30084854	30084886	chr3R	30086321	30086354	hobo	12	1467	2.0	2.5	2.2	3.8	1500	chr3R	30084854	intron	sima +	chr3R	30085604	intron	sima +	chr3R	30086354	intron	sima +	chr3R_12_30085001	chr3R_30085001	RC5_1-HE
2365	chr3R	30317322	30317356	chr3R	30324915	30324949	roo	11	7593	2.0	1.5	1.8	3.9	7627	chr3R	30317322	intron	hdc +	chr3R	30321136	intron	hdc +	chr3R	30324949	intron	hdc +	chr3R_11_30320001	chr3R_30320001	RC5_1-HE
2367	chr3R	30396229	30396249	chr3R	30404496	30404516	roo	4	8267	4.0	4.0	4.0	0.8	8287	chr3R	30396229	intergenic	not near genes	chr3R	30400372	intergenic	not near genes	chr3R	30404516	5` UTR	CR45570 +	chr3R_4_30400001	chr3R_30400001	RC5_1-HE
2369	chr3R	30480479	30480492	chr3R	30482948	30482961	jockey	4	2469	2.5	3.5	3.0	1.0	2482	chr3R	30480479	intron	PH4alphaEFB +	chr3R	30481720	intron	PH4alphaEFB +	chr3R	30482961	intron	PH4alphaEFB +	chr3R_4_30480001	chr3R_30480001	RC5_1-HE
2377	chr3R	30679516	30679552	chr3R	30686986	30687022	blood	9	7470	2.5	0.0	1.2	4.1	7506	chr3R	30679516	intergenic	not near genes	chr3R	30683269	intergenic	not near genes	chr3R	30687022	intergenic	not near genes	chr3R_9_30680001	chr3R_30680001	RC5_1-HE
2380	chr3R	30818818	30818845	chr3R	30820384	30820411	1360	8	1566	1.0	0.0	0.5	5.3	1593	chr3R	30818818	intron	cindr +	chr3R	30819614	intron	cindr +	chr3R	30820411	intron	cindr +	chr3R_8_30815001	chr3R_30815001	RC5_1-HE
2388	chr3R	31074229	31074250	chr3R	31081828	31081849	springer	9	7599	4.0	0.5	2.2	2.8	7620	chr3R	31074229	intron	Sox100B +	chr3R	31078039	intron	Sox100B +	chr3R	31081849	intron	Sox100B +	chr3R_9_31075001	chr3R_31075001	RC5_1-HE
2393	chr3R	31279373	31279392	chr3R	31285565	31285584	diver	9	6190	7.0	6.5	6.8	1.2	6211	chr3R	31279373	intergenic	not near genes	chr3R	31282478	intergenic	not near genes	chr3R	31285584	intergenic	not near genes	chr3R_9_31280001	chr3R_31280001	RC5_1-HE
2397	chr3R	31413093	31413120	chr3R	31418294	31418320	copia	10	5200	4.0	5.0	4.5	1.8	5227	chr3R	31413093	intron	Gprk2 +	chr3R	31415706	intron	Gprk2 +	chr3R	31418320	intron	Gprk2 +	chr3R_10_31415001	chr3R_31415001	RC5_1-HE
2405	chr3R	31691533	31691563	chr3R	31696299	31696312	Doc	11	4764	3.5	3.0	3.2	2.6	4779	chr3R	31691533	intergenic	not near genes	chr3R	31693922	intergenic	not near genes	chr3R	31696312	intergenic	not near genes	chr3R_11_31690001	chr3R_31690001	RC5_1-HE
2422	chr3R	31997989	31998025	chr3R	32005460	32005496	blood	11	7471	3.5	8.0	5.8	1.6	7507	chr3R	31997989	intron	heph -	chr3R	32001742	intron	heph -	chr3R	32005496	intron	heph -	chr3R_11_32000001	chr3R_32000001	RC5_1-HE
2423	chr4	76493	76496	chr4	81937	81940	I-element	5	5444	18.0	7.5	12.8	0.4	5447	chr4	76493	intron	pan +	chr4	79216	intron	pan +	chr4	81940	intron	pan +	chr4_5_75001	chr4_75001	RC5_1-HE
2424	chr4	76497	76515	chr4	81935	81959	I-element	13	5443	13.0	7.0	10.0	1.2	5462	chr4	76497	intron	pan +	chr4	79228	intron	pan +	chr4	81959	intron	pan +	chr4_13_75001	chr4_75001	RC5_1-HE
2428	chr4	319989	320020	chr4	328166	328197	Stalker2	7	8177	6.0	5.0	5.5	1.1	8208	chr4	319989	3` UTR	CG32850 +	chr4	324093	intron	CG32850 +	chr4	328197	3` UTR,3` UTR	CG32850 +,PMCA -	chr4_7_320001	chr4_320001	RC5_1-HE
2430	chr4	671602	671636	chr4	680186	680220	Tirant	33	8583	16.0	19.0	17.5	1.8	8618	chr4	671602	intron	CG11360 +	chr4	675911	intron	CG11360 +	chr4	680220	intron	CG11360 +	chr4_33_675001	chr4_675001	RC5_1-HE
2443	chrX	295855	295881	chrX	303476	303502	412	19	7620	9.0	6.0	7.5	2.2	7647	chrX	295855	intron	CG3777 +	chrX	299678	intron	CG3777 +	chrX	303502	intron	CG3777 +	chrX_19_295001	chrX_295001	RC5_1-HE
2444	chrX	318468	318500	chrX	323555	323587	flea	21	5087	11.0	8.5	9.8	1.9	5119	chrX	318468	intron,intron	CG3777 +,CG32816 -	chrX	321028	intron,intron	CG3777 +,CG32816 -	chrX	323587	intron,intron	CG3777 +,CG32816 -	chrX_21_320001	chrX_320001	RC5_1-HE
2448	chrX	428416	428451	chrX	434602	434637	3S18	6	6185	5.0	2.0	3.5	1.3	6221	chrX	428416	intron	CG32816 -	chrX	431526	intron	CG32816 -	chrX	434637	intron	CG32816 -	chrX_6_430001	chrX_430001	RC5_1-HE
2455	chrX	551420	551449	chrX	558983	559012	412	19	7560	6.5	6.0	6.2	2.6	7592	chrX	551420	intron	Appl +	chrX	555216	intron	Appl +	chrX	559012	intron	Appl +	chrX_19_555001	chrX_555001	RC5_1-HE
2463	chrX	812270	812300	chrX	817904	817934	297	8	5634	3.5	4.5	4.0	1.6	5664	chrX	812270	intron	CG43867 -	chrX	815102	intron	CG43867 -	chrX	817934	intron	CG43867 -	chrX_8_815001	chrX_815001	RC5_1-HE
2464	chrX	827599	827633	chrX	835391	835420	roo	8	7791	4.0	1.5	2.8	2.1	7821	chrX	827599	intron	CG43867 -	chrX	831510	intron	CG43867 -	chrX	835420	intron	CG43867 -	chrX_8_830001	chrX_830001	RC5_1-HE
2465	chrX	906700	906721	chrX	908490	908511	S-element	4	1790	3.5	4.5	4.0	0.8	1811	chrX	906700	intron	CG43867 -	chrX	907606	intron	CG43867 -	chrX	908511	intron	CG43867 -	chrX_4_905001	chrX_905001	RC5_1-HE
2474	chrX	1627978	1627992	chrX	1635447	1635461	gtwin	10	7469	21.5	13.0	17.2	0.5	7483	chrX	1627978	intron,intron	Mur2B -,br +	chrX	1631720	intron,intron	Mur2B -,br +	chrX	1635461	intron,intron	Mur2B -,br +	chrX_10_1630001	chrX_1630001	RC5_1-HE
2475	chrX	1627993	1628001	chrX	1635445	1635470	gtwin	8	7467	15.5	12.5	14.0	0.5	7477	chrX	1627993	intron,intron	Mur2B -,br +	chrX	1631732	intron,intron	Mur2B -,br +	chrX	1635470	intron,intron	Mur2B -,br +	chrX_8_1630001	chrX_1630001	RC5_1-HE
2478	chrX	1930539	1930567	chrX	1938111	1938139	opus	7	7572	2.0	2.0	2.0	2.3	7600	chrX	1930539	intergenic	CG11596 +	chrX	1934339	intergenic	not near genes	chrX	1938139	3` UTR	CG3857 -	chrX_7_1930001	chrX_1930001	RC5_1-HE
2487	chrX	2399840	2399871	chrX	2408188	2408188	roo	11	8350	1.5	0.5	1.0	5.5	8348	chrX	2399840	intergenic	not near genes	chrX	2404014	intergenic	not near genes	chrX	2408188	intergenic	not near genes	chrX_11_2400001	chrX_2400001	RC5_1-HE
2494	chrX	2664394	2664403	chrX	2665541	2665550	1360	6	1147	0.0	8.5	4.2	1.2	1156	chrX	2664394	intron	sgg +	chrX	2664972	intron	sgg +	chrX	2665550	intron	sgg +	chrX_6_2660001	chrX_2660001	RC5_1-HE
2496	chrX	2844908	2844933	chrX	2852319	2852344	mdg1	16	7411	4.5	6.0	5.2	2.6	7436	chrX	2844908	intron	kirre +	chrX	2848626	intron	kirre +	chrX	2852344	intron	kirre +	chrX_16_2845001	chrX_2845001	RC5_1-HE
2499	chrX	3075638	3075667	chrX	3080945	3080974	Transpac	7	5307	4.0	1.0	2.5	2.0	5336	chrX	3075638	intron	kirre +	chrX	3078306	intron	kirre +	chrX	3080974	intron	kirre +	chrX_7_3075001	chrX_3075001	RC5_1-HE
2511	chrX	3415027	3415051	chrX	3421213	3421237	3S18	4	6184	1.0	1.0	1.0	2.0	6210	chrX	3415027	intron,intron	CR44999 +,CG12535 -	chrX	3418132	intron,intron	CR44999 +,CG12535 -	chrX	3421237	intron,intron	CR44999 +,CG12535 -	chrX_4_3415001	chrX_3415001	RC5_1-HE
2515	chrX	3493090	3493122	chrX	3502250	3502282	roo	5	9160	4.5	0.0	2.2	1.6	9192	chrX	3493090	intron,intron	CR44999 +,Gas8 -	chrX	3497686	intron,intron	CR44999 +,Gas8 -	chrX	3502282	intron,intron	CR44999 +,Gas8 -	chrX_5_3495001	chrX_3495001	RC5_1-HE
2518	chrX	3597549	3597583	chrX	3619717	3619741	roo	27	22168	4.5	5.0	4.8	4.7	22192	chrX	3597549	intron	AstA-R1 +	chrX	3608645	intron	AstA-R1 +	chrX	3619741	intron	AstA-R1 +	chrX_27_3605001	chrX_3605001	RC5_1-HE
2523	chrX	3726757	3726797	chrX	3730155	3730195	NOF	18	3396	4.5	0.0	2.2	5.6	3438	chrX	3726757	intron	tlk +	chrX	3728476	intron	tlk +	chrX	3730195	intron	tlk +	chrX_18_3725001	chrX_3725001	RC5_1-HE
2534	chrX	3986862	3986892	chrX	3994495	3994526	412	20	7634	0.5	5.0	2.8	5.3	7664	chrX	3986862	intergenic	not near genes	chrX	3990694	intergenic	not near genes	chrX	3994526	intergenic	not near genes	chrX_20_3990001	chrX_3990001	RC5_1-HE
2539	chrX	4157890	4157922	chrX	4164926	4164958	297	24	7036	5.5	8.5	7.0	3.0	7068	chrX	4157890	intron	Fas2 -	chrX	4161424	intron	Fas2 -	chrX	4164958	intron	Fas2 -	chrX_24_4160001	chrX_4160001	RC5_1-HE
2553	chrX	4700392	4700426	chrX	4700736	4700770	jockey	15	343	5.5	4.5	5.0	2.5	378	chrX	4700392	3` UTR	ctp +	chrX	4700581	3` UTR	ctp +	chrX	4700770	3` UTR	ctp +	chrX_15_4700001	chrX_4700001	RC5_1-HE
2554	chrX	4731813	4731825	chrX	4736907	4736919	jockey	5	5092	6.5	4.5	5.5	0.8	5106	chrX	4731813	intergenic	not near genes	chrX	4734366	intergenic	not near genes	chrX	4736919	intergenic	not near genes	chrX_5_4730001	chrX_4730001	RC5_1-HE
2558	chrX	4763249	4763283	chrX	4763738	4763772	Stalker4	12	489	3.5	2.5	3.0	3.0	523	chrX	4763249	intergenic	not near genes	chrX	4763510	intergenic	not near genes	chrX	4763772	intergenic	not near genes	chrX_12_4760001	chrX_4760001	RC5_1-HE
2559	chrX	4792383	4792411	chrX	4792817	4792844	jockey	6	432	2.0	3.0	2.5	1.7	461	chrX	4792383	intergenic	not near genes	chrX	4792614	intergenic	not near genes	chrX	4792844	intergenic	not near genes	chrX_6_4790001	chrX_4790001	RC5_1-HE
2560	chrX	4827977	4827991	chrX	4835337	4835363	Stalker4	11	7367	11.5	4.0	7.8	1.2	7386	chrX	4827977	intergenic	not near genes	chrX	4831670	intergenic	not near genes	chrX	4835363	intergenic	not near genes	chrX_11_4830001	chrX_4830001	RC5_1-HE
2561	chrX	4990044	4990076	chrX	4997259	4997291	roo	18	7214	5.5	7.0	6.2	2.5	7247	chrX	4990044	intron	CR44833 -	chrX	4993668	intron	CR44833 -	chrX	4997291	intron	CR44833 -	chrX_18_4990001	chrX_4990001	RC5_1-HE
2564	chrX	5096273	5096306	chrX	5103838	5103872	springer	11	7563	3.5	1.5	2.5	3.1	7599	chrX	5096273	intron,intron	CG15465 +,rg +	chrX	5100072	intron,intron	CG15465 +,rg +	chrX	5103872	intron,intron	CG15465 +,rg +	chrX_11_5100001	chrX_5100001	RC5_1-HE
2571	chrX	5338708	5338737	chrX	5339962	5339980	jockey	7	1249	3.5	6.0	4.8	1.2	1272	chrX	5338708	intergenic	not near genes	chrX	5339344	intergenic	not near genes	chrX	5339980	intergenic	SK +	chrX_7_5335001	chrX_5335001	RC5_1-HE
2573	chrX	5481067	5481090	chrX	5485036	5485059	I-element	15	3969	0.0	9.0	4.5	2.7	3992	chrX	5481067	intron	SPR +	chrX	5483063	intron	SPR +	chrX	5485059	intron	SPR +	chrX_15_5480001	chrX_5480001	RC5_1-HE
2583	chrX	6171582	6171615	chrX	6179014	6179047	Quasimodo	16	7432	6.0	5.5	5.8	2.4	7465	chrX	6171582	intron	Ca-alpha1T -	chrX	6175314	intron	Ca-alpha1T -	chrX	6179047	intron	Ca-alpha1T -	chrX_16_6175001	chrX_6175001	RC5_1-HE
2585	chrX	6335231	6335243	chrX	6337721	6337754	Tirant	4	2506	0.5	2.0	1.2	1.8	2523	chrX	6335231	intergenic	not near genes	chrX	6336492	intergenic	not near genes	chrX	6337754	intergenic	CG3842 +	chrX_4_6335001	chrX_6335001	RC5_1-HE
2587	chrX	6392875	6392898	chrX	6397638	6397664	Doc	11	4765	1.5	3.0	2.2	3.4	4789	chrX	6392875	intergenic	not near genes	chrX	6395270	intergenic	not near genes	chrX	6397664	intergenic	not near genes	chrX_11_6395001	chrX_6395001	RC5_1-HE
2588	chrX	6445318	6445333	chrX	6451077	6451092	297	4	5759	6.5	6.5	6.5	0.5	5774	chrX	6445318	intron	CG42340 -	chrX	6448205	intron	CG42340 -	chrX	6451092	intron	CG42340 -	chrX_4_6445001	chrX_6445001	RC5_1-HE
2591	chrX	6562816	6562851	chrX	6571299	6571334	Tirant	5	8483	3.5	4.0	3.8	1.0	8518	chrX	6562816	intron	CG34417 +	chrX	6567075	intron	CG34417 +	chrX	6571334	intron	CG34417 +	chrX_5_6565001	chrX_6565001	RC5_1-HE
2596	chrX	7125245	7125270	chrX	7134405	7134430	roo	10	9160	3.0	5.5	4.2	1.9	9185	chrX	7125245	intergenic	not near genes	chrX	7129838	intergenic	not near genes	chrX	7134430	intergenic	not near genes	chrX_10_7125001	chrX_7125001	RC5_1-HE
2605	chrX	7702903	7702940	chrX	7703343	7703380	jockey	5	440	3.5	3.5	3.5	1.1	477	chrX	7702903	intron	CHES-1-like -	chrX	7703142	intron	CHES-1-like -	chrX	7703380	intron	CHES-1-like -	chrX_5_7700001	chrX_7700001	RC5_1-HE
2606	chrX	7784234	7784268	chrX	7784537	7784543	jockey	10	299	1.0	10.0	5.5	1.5	309	chrX	7784234	intergenic	not near genes	chrX	7784388	intergenic	not near genes	chrX	7784543	intergenic	not near genes	chrX_10_7780001	chrX_7780001	RC5_1-HE
2610	chrX	8031426	8031460	chrX	8035736	8035770	Juan	13	4310	4.5	2.0	3.2	3.1	4344	chrX	8031426	intergenic	not near genes	chrX	8033598	intergenic	not near genes	chrX	8035770	3` UTR	CG2233 -	chrX_13_8030001	chrX_8030001	RC5_1-HE
2613	chrX	8364843	8364878	chrX	8365241	8365276	BS	27	397	5.5	9.5	7.5	3.2	433	chrX	8364843	intron	nAChRalpha3 -	chrX	8365060	intron	nAChRalpha3 -	chrX	8365276	intron	nAChRalpha3 -	chrX_27_8365001	chrX_8365001	RC5_1-HE
2621	chrX	8922324	8922358	chrX	8922759	8922793	jockey	19	435	6.0	4.0	5.0	3.2	469	chrX	8922324	intron	rdgA +	chrX	8922558	intron	rdgA +	chrX	8922793	intron	rdgA +	chrX_19_8920001	chrX_8920001	RC5_1-HE
2622	chrX	8927583	8927615	chrX	8929854	8929886	NOF	7	2271	6.0	2.5	4.2	1.3	2303	chrX	8927583	intron	rdgA +	chrX	8928734	intron	rdgA +	chrX	8929886	intron	rdgA +	chrX_7_8925001	chrX_8925001	RC5_1-HE
2623	chrX	8948755	8948792	chrX	8956266	8956303	roo	7	7511	2.0	2.0	2.0	2.3	7548	chrX	8948755	intron	rdgA +	chrX	8952529	intron	rdgA +	chrX	8956303	intron	rdgA +	chrX_7_8950001	chrX_8950001	RC5_1-HE
2636	chrX	9508131	9508164	chrX	9509650	9509683	jockey	15	1519	6.0	3.5	4.8	2.6	1552	chrX	9508131	intron	CG32700 -	chrX	9508907	intron	CG32700 -	chrX	9509683	intron	CG32700 -	chrX_15_9505001	chrX_9505001	RC5_1-HE
2637	chrX	9575796	9575813	chrX	9576121	9576138	mdg3	6	325	0.5	4.0	2.2	1.9	342	chrX	9575796	intron,exon	CG32699 -,CG42395 -	chrX	9575967	intron,intron	CG32699 -,CG42395 -	chrX	9576138	intron,5` UTR	CG32699 -,CG42395 -	chrX_6_9575001	chrX_9575001	RC5_1-HE
2649	chrX	10138222	10138247	chrX	10145719	10145752	412	9	7504	6.5	4.5	5.5	1.4	7530	chrX	10138222	intron,intron	RhoU +,CR44894 -	chrX	10141987	intron,intron	RhoU +,CR44894 -	chrX	10145752	intron,intron	RhoU +,CR44894 -	chrX_9_10140001	chrX_10140001	RC5_1-HE
2654	chrX	10267299	10267327	chrX	10276450	10276478	roo	7	9151	0.0	2.5	1.2	3.2	9179	chrX	10267299	3` UTR	alpha-Man-I -	chrX	10271888	intron	alpha-Man-I -	chrX	10276478	3` UTR	alpha-Man-I -	chrX_7_10270001	chrX_10270001	RC5_1-HE
2663	chrX	10550856	10550887	chrX	10552320	10552355	hobo	10	1466	2.5	4.0	3.2	2.4	1499	chrX	10550856	intron	spri -	chrX	10551606	intron	spri -	chrX	10552355	intron	spri -	chrX_10_10550001	chrX_10550001	RC5_1-HE
2666	chrX	10686047	10686084	chrX	10691185	10691222	roo	20	5138	5.5	8.5	7.0	2.5	5175	chrX	10686047	intron	X11Lbeta +	chrX	10688634	intron	X11Lbeta +	chrX	10691222	intron	X11Lbeta +	chrX_20_10685001	chrX_10685001	RC5_1-HE
2675	chrX	11184257	11184274	chrX	11189334	11189351	flea	4	5077	4.5	7.5	6.0	0.6	5094	chrX	11184257	intergenic	not near genes	chrX	11186804	intergenic	not near genes	chrX	11189351	intergenic	not near genes	chrX_4_11185001	chrX_11185001	RC5_1-HE
2677	chrX	11194450	11194462	chrX	11201869	11201884	gypsy5	5	7421	1.0	12.0	6.5	0.7	7434	chrX	11194450	intergenic	not near genes	chrX	11198167	intergenic	not near genes	chrX	11201884	intergenic	CG11106 +	chrX_5_11195001	chrX_11195001	RC5_1-HE
2682	chrX	11268565	11268577	chrX	11270059	11270071	hopper2	5	1493	8.5	0.0	4.2	1.0	1506	chrX	11268565	intron	CG44422 -	chrX	11269318	intron	CG44422 -	chrX	11270071	intron	CG44422 -	chrX_5_11265001	chrX_11265001	RC5_1-HE
2685	chrX	11312057	11312090	chrX	11319411	11319444	Stalker2	4	7354	0.0	2.5	1.2	1.8	7387	chrX	11312057	intergenic	not near genes	chrX	11315750	intergenic	not near genes	chrX	11319444	intergenic	not near genes	chrX_4_11315001	chrX_11315001	RC5_1-HE
2688	chrX	11535038	11535046	chrX	11541509	11541517	Burdock	5	6471	9.0	6.0	7.5	0.6	6479	chrX	11535038	intron	Drak +	chrX	11538278	intron	Drak +	chrX	11541517	intron	Drak +	chrX_5_11535001	chrX_11535001	RC5_1-HE
2690	chrX	11571454	11571484	chrX	11571696	11571726	pogo	8	242	1.5	3.5	2.5	2.3	272	chrX	11571454	3` UTR	Kmn1 -	chrX	11571590	3` UTR	Kmn1 -	chrX	11571726	3` UTR	Kmn1 -	chrX_8_11570001	chrX_11570001	RC5_1-HE
2691	chrX	11633414	11633444	chrX	11640469	11640503	297	7	7058	8.0	0.0	4.0	1.4	7089	chrX	11633414	intron	Ptp10D +	chrX	11636958	intron	Ptp10D +	chrX	11640503	intron	Ptp10D +	chrX_7_11635001	chrX_11635001	RC5_1-HE
2692	chrX	11645108	11645140	chrX	11648278	11648311	NOF	7	3171	0.5	3.0	1.8	2.5	3203	chrX	11645108	intron	Ptp10D +	chrX	11646710	intron	Ptp10D +	chrX	11648311	intron	Ptp10D +	chrX_7_11645001	chrX_11645001	RC5_1-HE
2701	chrX	12168136	12168165	chrX	12173579	12173608	I-element	10	5442	10.5	7.5	9.0	1.0	5472	chrX	12168136	intron	Ten-a +	chrX	12170872	intron	Ten-a +	chrX	12173608	intron	Ten-a +	chrX_10_12170001	chrX_12170001	RC5_1-HE
2706	chrX	12301955	12301989	chrX	12303262	12303296	X-element	15	1306	3.5	4.0	3.8	3.1	1341	chrX	12301955	intron	Ten-a +	chrX	12302626	intron	Ten-a +	chrX	12303296	intron	Ten-a +	chrX_15_12300001	chrX_12300001	RC5_1-HE
2734	chrX	13401481	13401517	chrX	13401834	13401870	jockey	4	353	0.5	2.5	1.5	1.6	389	chrX	13401481	intergenic	CG1673 +,CG12725 -	chrX	13401676	intergenic	CG12725 -,CG1673 +	chrX	13401870	3` UTR	CG12725 -	chrX_4_13400001	chrX_13400001	RC5_1-HE
2735	chrX	13429450	13429494	chrX	13430606	13430644	jockey	11	1149	0.0	4.5	2.2	3.4	1194	chrX	13429450	intergenic	not near genes	chrX	13430047	intergenic	not near genes	chrX	13430644	intergenic	not near genes	chrX_11_13430001	chrX_13430001	RC5_1-HE
2736	chrX	13463648	13463676	chrX	13469226	13469254	mdg3	11	5578	4.0	4.5	4.2	2.1	5606	chrX	13463648	intron	Neto +	chrX	13466451	intron	Neto +	chrX	13469254	intron	Neto +	chrX_11_13465001	chrX_13465001	RC5_1-HE
2746	chrX	13937978	13938009	chrX	13941250	13941281	I-element	12	3271	3.0	0.5	1.8	4.3	3303	chrX	13937978	intron	mamo -	chrX	13939630	intron	mamo -	chrX	13941281	intron	mamo -	chrX_12_13935001	chrX_13935001	RC5_1-HE
2749	chrX	14105022	14105055	chrX	14114174	14114207	roo	19	9149	4.0	5.0	4.5	3.5	9185	chrX	14105022	intergenic	not near genes	chrX	14109614	intergenic	not near genes	chrX	14114207	5` UTR	CR44657 +	chrX_19_14105001	chrX_14105001	RC5_1-HE
2751	chrX	14157592	14157607	chrX	14163250	14163265	297	4	5658	4.0	1.5	2.8	1.1	5673	chrX	14157592	intergenic	not near genes	chrX	14160428	intergenic	not near genes	chrX	14163265	intergenic	not near genes	chrX_4_14160001	chrX_14160001	RC5_1-HE
2760	chrX	14416305	14416337	chrX	14421074	14421105	F-element	11	4768	0.0	8.5	4.2	2.1	4800	chrX	14416305	intron	dpr8 +	chrX	14418705	intron	dpr8 +	chrX	14421105	intron	dpr8 +	chrX_11_14415001	chrX_14415001	RC5_1-HE
2764	chrX	14589685	14589706	chrX	14589927	14589948	pogo	9	241	4.5	1.5	3.0	2.2	263	chrX	14589685	intron	CG9413 -	chrX	14589816	intron	CG9413 -	chrX	14589948	intron	CG9413 -	chrX_9_14585001	chrX_14585001	RC5_1-HE
2767	chrX	14636458	14636496	chrX	14641900	14641938	I-element	23	5442	5.0	6.5	5.8	3.4	5480	chrX	14636458	intron	NetA -	chrX	14639198	intron	NetA -	chrX	14641938	intron	NetA -	chrX_23_14635001	chrX_14635001	RC5_1-HE
2774	chrX	14778026	14778061	chrX	14782824	14782859	Doc	12	4798	2.5	7.5	5.0	2.0	4833	chrX	14778026	intergenic	CG5347 +	chrX	14780442	intergenic	not near genes	chrX	14782859	intergenic	Ag5r2 -	chrX_12_14780001	chrX_14780001	RC5_1-HE
2776	chrX	14818777	14818797	chrX	14823966	14823990	copia	5	5197	1.5	3.0	2.2	1.6	5213	chrX	14818777	intron	rut -	chrX	14821384	intron	rut -	chrX	14823990	intron	rut -	chrX_5_14820001	chrX_14820001	RC5_1-HE
2778	chrX	14936858	14936887	chrX	14946116	14946145	roo	5	9258	1.5	2.5	2.0	1.7	9287	chrX	14936858	intron	pdgy -	chrX	14941502	intron	pdgy -	chrX	14946145	intron	pdgy -	chrX_5_14940001	chrX_14940001	RC5_1-HE
2787	chrX	15273714	15273736	chrX	15274879	15274904	1360	11	1166	8.0	10.5	9.2	1.1	1190	chrX	15273714	intergenic	not near genes	chrX	15274309	intergenic	not near genes	chrX	15274904	intergenic	not near genes	chrX_11_15270001	chrX_15270001	RC5_1-HE
2789	chrX	15413048	15413084	chrX	15417351	15417387	Juan	46	4302	6.5	11.0	8.8	4.7	4339	chrX	15413048	intron	Cngl -	chrX	15415218	intron	Cngl -	chrX	15417387	intron	Cngl -	chrX_46_15415001	chrX_15415001	RC5_1-HE
2792	chrX	15421937	15421947	chrX	15423436	15423459	pogo	7	1510	3.5	5.5	4.5	1.3	1522	chrX	15421937	intron	Cngl -	chrX	15422698	intron	Cngl -	chrX	15423459	intron	Cngl -	chrX_7_15420001	chrX_15420001	RC5_1-HE
2793	chrX	15435687	15435705	chrX	15436121	15436139	rover	13	434	2.5	14.0	8.2	1.4	452	chrX	15435687	intron	Cngl -	chrX	15435913	intron	Cngl -	chrX	15436139	intron	Cngl -	chrX_13_15435001	chrX_15435001	RC5_1-HE
2806	chrX	16222786	16222802	chrX	16231137	16231153	roo	4	8351	0.5	5.5	3.0	1.0	8367	chrX	16222786	intergenic	not near genes	chrX	16226970	intergenic	not near genes	chrX	16231153	intergenic	not near genes	chrX_4_16225001	chrX_16225001	RC5_1-HE
2814	chrX	16492644	16492679	chrX	16498222	16498257	mdg3	29	5577	8.5	4.5	6.5	3.9	5613	chrX	16492644	intron	para -	chrX	16495450	intron	para -	chrX	16498257	intron	para -	chrX_29_16495001	chrX_16495001	RC5_1-HE
2856	chrX	17792961	17792981	chrX	17796259	17796279	flea	8	3298	3.0	6.5	4.8	1.4	3318	chrX	17792961	intron	OdsH +	chrX	17794620	intron	OdsH +	chrX	17796279	intron	OdsH +	chrX_8_17790001	chrX_17790001	RC5_1-HE
2867	chrX	18194064	18194100	chrX	18194600	18194636	BS	21	536	11.0	7.5	9.2	2.1	572	chrX	18194064	intron	Frq2 +	chrX	18194350	intron	Frq2 +	chrX	18194636	intron	Frq2 +	chrX_21_18190001	chrX_18190001	RC5_1-HE
2875	chrX	18429492	18429519	chrX	18434804	18434831	Transpac	12	5312	6.0	5.5	5.8	1.8	5339	chrX	18429492	intergenic	not near genes	chrX	18432162	intergenic	not near genes	chrX	18434831	intergenic	not near genes	chrX_12_18430001	chrX_18430001	RC5_1-HE
2879	chrX	18555397	18555411	chrX	18556920	18556934	transib2	6	1523	2.5	6.0	4.2	1.2	1537	chrX	18555397	intron	Bx +	chrX	18556166	intron	Bx +	chrX	18556934	intron	Bx +	chrX_6_18555001	chrX_18555001	RC5_1-HE
2887	chrX	18957073	18957078	chrX	18965730	18965734	roo	4	8657	2.0	0.0	1.0	2.0	8661	chrX	18957073	intron	CG43759 +	chrX	18961404	intron	CG43759 +	chrX	18965734	intron	CG43759 +	chrX_4_18960001	chrX_18960001	RC5_1-HE
2892	chrX	19060406	19060414	chrX	19065191	19065199	Doc	7	4785	13.5	5.5	9.5	0.7	4793	chrX	19060406	intron	CG14190 +	chrX	19062802	intron	CG14190 +	chrX	19065199	intron	CG14190 +	chrX_7_19060001	chrX_19060001	RC5_1-HE
2893	chrX	19060415	19060437	chrX	19065190	19065222	Doc	12	4784	5.5	5.5	5.5	1.8	4807	chrX	19060415	intron	CG14190 +	chrX	19062818	intron	CG14190 +	chrX	19065222	intron	CG14190 +	chrX_12_19060001	chrX_19060001	RC5_1-HE
2899	chrX	19136556	19136584	chrX	19143475	19143504	412	5	6919	1.5	4.0	2.8	1.3	6948	chrX	19136556	intergenic	not near genes	chrX	19140030	intergenic	not near genes	chrX	19143504	3` UTR	RhoGAP18B -	chrX_5_19140001	chrX_19140001	RC5_1-HE
2905	chrX	19356986	19357019	chrX	19358428	19358435	NOF	21	1441	7.0	8.5	7.8	2.4	1449	chrX	19356986	intron	kek5 +	chrX	19357710	intron	kek5 +	chrX	19358435	intron	kek5 +	chrX_21_19355001	chrX_19355001	RC5_1-HE
2907	chrX	19380174	19380187	chrX	19380417	19380430	pogo	9	243	4.5	6.0	5.2	1.5	256	chrX	19380174	intron	kek5 +	chrX	19380302	intron	kek5 +	chrX	19380430	intron	kek5 +	chrX_9_19380001	chrX_19380001	RC5_1-HE
2909	chrX	19472139	19472156	chrX	19472689	19472722	jockey	4	564	1.5	1.5	1.5	1.6	583	chrX	19472139	intergenic	kek5 +	chrX	19472430	intergenic	not near genes	chrX	19472722	intergenic	not near genes	chrX_4_19470001	chrX_19470001	RC5_1-HE
2920	chrX	19797331	19797340	chrX	19804659	19804668	Stalker4	4	7328	5.5	2.5	4.0	0.8	7337	chrX	19797331	intergenic	not near genes	chrX	19801000	intergenic	not near genes	chrX	19804668	intergenic	not near genes	chrX_4_19800001	chrX_19800001	RC5_1-HE
2921	chrX	19812738	19812763	chrX	19816027	19816052	Gypsy12A_LTR	12	3290	46.5	28.0	37.2	0.3	3314	chrX	19812738	5` UTR	skpD +	chrX	19814395	intergenic	not near genes	chrX	19816052	intergenic	skpC +	chrX_12_19810001	chrX_19810001	RC5_1-HE
2946	chrX	20377325	20377346	chrX	20378793	20378814	hobo	9	1468	1.5	2.5	2.0	3.0	1489	chrX	20377325	intergenic	not near genes	chrX	20378070	intergenic	not near genes	chrX	20378814	intergenic	not near genes	chrX_9_20375001	chrX_20375001	RC5_1-HE
2954	chrX	20504131	20504152	chrX	20505653	20505674	transib2	11	1522	3.5	3.0	3.2	2.6	1543	chrX	20504131	intron	RhoGAP19D -	chrX	20504902	intron	RhoGAP19D -	chrX	20505674	intron	RhoGAP19D -	chrX_11_20500001	chrX_20500001	RC5_1-HE
2961	chrX	20836725	20836757	chrX	20844328	20844360	roo	4	7603	0.5	2.0	1.2	1.8	7635	chrX	20836725	intron	shakB -	chrX	20840542	intron	shakB -	chrX	20844360	intron	shakB -	chrX_4_20840001	chrX_20840001	RC5_1-HE
2968	chrX	20940717	20940751	chrX	20942187	20942221	hobo	23	1469	9.5	3.0	6.2	3.2	1504	chrX	20940717	intergenic	not near genes	chrX	20941469	intergenic	not near genes	chrX	20942221	intergenic	not near genes	chrX_23_20940001	chrX_20940001	RC5_1-HE
2970	chrX	20956995	20957012	chrX	20962437	20962455	I-element	6	5443	0.0	5.5	2.8	1.6	5460	chrX	20956995	intergenic	not near genes	chrX	20959725	intergenic	not near genes	chrX	20962455	intergenic	Ser6 -	chrX_6_20955001	chrX_20955001	RC5_1-HE
2978	chrX	21061876	21061893	chrX	21062363	21062379	roo	6	487	0.0	4.0	2.0	2.0	503	chrX	21061876	intron	bves +	chrX	21062128	intron	bves +	chrX	21062379	intron,3` UTR	bves +,CG32512 -	chrX_6_21060001	chrX_21060001	RC5_1-HE
2980	chrX	21086137	21086165	chrX	21087167	21087195	jockey	16	1030	0.5	8.0	4.2	3.1	1058	chrX	21086137	intergenic	not near genes	chrX	21086666	intergenic	not near genes	chrX	21087195	intergenic	not near genes	chrX_16_21085001	chrX_21085001	RC5_1-HE
2991	chrX	21458692	21458727	chrX	21464129	21464164	Ivk	16	5437	3.5	3.5	3.5	3.6	5472	chrX	21458692	intergenic	not near genes	chrX	21461428	intergenic	not near genes	chrX	21464164	intergenic	not near genes	chrX_16_21460001	chrX_21460001	RC5_1-HE
2993	chrX	21474401	21474433	chrX	21474768	21474800	1731	13	365	7.0	4.0	5.5	2.0	399	chrX	21474401	intergenic	not near genes	chrX	21474600	intergenic	not near genes	chrX	21474800	intergenic	not near genes	chrX_13_21470001	chrX_21470001	RC5_1-HE
3004	chrX	22522640	22522651	chrX	22525461	22525472	NOF	4	2821	3.0	6.5	4.8	0.7	2832	chrX	22522640	intron	CG17600 +	chrX	22524056	intron	CG17600 +	chrX	22525472	intron	CG17600 +	chrX_4_22520001	chrX_22520001	RC5_1-HE
3007	chrX	22564576	22564586	chrX	22575136	22575150	jockey	4	10561	10.5	14.5	12.5	0.3	10574	chrX	22564576	intergenic	not near genes	chrX	22569863	intergenic	not near genes	chrX	22575150	intergenic	not near genes	chrX_4_22565001	chrX_22565001	RC5_1-HE
3015	chrX	22681479	22681515	chrX	22688938	22688974	HMS-Beagle2	18	7458	9.5	11.5	10.5	1.6	7495	chrX	22681479	intron	CR44997 +	chrX	22685226	intron	CR44997 +	chrX	22688974	intron	CR44997 +	chrX_18_22685001	chrX_22685001	RC5_1-HE
3016	chrX	22697495	22697524	chrX	22701793	22701822	Juan	19	4297	6.0	13.0	9.5	1.8	4327	chrX	22697495	intron	CR44997 +	chrX	22699658	intron	CR44997 +	chrX	22701822	intron	CR44997 +	chrX_19_22695001	chrX_22695001	RC5_1-HE
3017	chrX	22771505	22771531	chrX	22774797	22774823	297	6	3288	5.0	4.5	4.8	1.0	3318	chrX	22771505	intron	CR44997 +	chrX	22773164	intron	CR44997 +	chrX	22774823	intron	CR44997 +	chrX_6_22770001	chrX_22770001	RC5_1-HE
3021	chrX	22811991	22811996	chrX	22816765	22816770	F-element	4	4774	15.0	7.0	11.0	0.3	4779	chrX	22811991	intergenic	CG12446 -	chrX	22814380	intergenic	not near genes	chrX	22816770	intergenic	not near genes	chrX_4_22810001	chrX_22810001	RC5_1-HE
3029	chrX	22996319	22996337	chrX	23003553	23003571	roo	4	7234	2.5	4.0	3.2	1.0	7252	chrX	22996319	intron,intron	stnA -,stnB -	chrX	22999945	intron,intron	stnA -,stnB -	chrX	23003571	intron,intron	stnA -,stnB -	chrX_4_22995001	chrX_22995001	RC5_1-HE