SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 46349 46385 chr2L 46428 46464 22 79 4.5 5.5 5.0 3.7 115 chr2L 46349 intron Cda5 - chr2L 46406 intron Cda5 - chr2L 46464 intron Cda5 - chr2L_22_45001 chr2L_45001 RC1_1-HE 2 chr2L 47455 47490 chr2L 52561 52596 jockey 26 5106 10.0 7.5 8.8 2.7 5141 chr2L 47455 intron Cda5 - chr2L 50026 intron Cda5 - chr2L 52596 intron Cda5 - chr2L_26_50001 chr2L_50001 RC1_1-HE 3 chr2L 89715 89747 chr2L 89793 89825 11 78 1.5 3.5 2.5 3.1 110 chr2L 89715 intergenic not near genes chr2L 89770 intergenic not near genes chr2L 89825 intergenic not near genes chr2L_11_85001 chr2L_85001 RC1_1-HE 4 chr2L 172058 172190 chr2L 172140 172269 25 81 2.5 2.5 2.5 7.1 211 chr2L 172058 intron spen + chr2L 172164 intron spen + chr2L 172269 intron spen + chr2L_25_170001 chr2L_170001 RC1_1-HE 5 chr2L 176074 176086 chr2L 176352 176364 9 278 1.0 6.0 3.5 2.0 290 chr2L 176074 intron spen + chr2L 176219 intron spen + chr2L 176364 intron spen + chr2L_9_175001 chr2L_175001 RC1_1-HE 6 chr2L 281662 281694 chr2L 281783 281815 9 121 2.5 5.5 4.0 1.8 153 chr2L 281662 3` UTR smo + chr2L 281738 3` UTR,3` UTR smo +,CG11601 - chr2L 281815 3` UTR,3` UTR smo +,CG11601 - chr2L_9_280001 chr2L_280001 RC1_1-HE 7 chr2L 297687 297715 chr2L 297788 297816 12 101 2.5 3.0 2.8 3.2 129 chr2L 297687 intergenic Pi3K21B +,Hop + chr2L 297752 intergenic Pi3K21B +,Hop + chr2L 297816 intergenic Pi3K21B +,Hop + chr2L_12_295001 chr2L_295001 RC1_1-HE 8 chr2L 310706 310736 chr2L 310789 310817 11 83 2.5 6.0 4.2 2.1 111 chr2L 310706 intron Plc21C + chr2L 310762 intron Plc21C + chr2L 310817 intron Plc21C + chr2L_11_310001 chr2L_310001 RC1_1-HE 9 chr2L 325129 325155 chr2L 325207 325233 22 77 12.5 12.0 12.2 1.7 104 chr2L 325129 intron Plc21C + chr2L 325181 intron Plc21C + chr2L 325233 intron Plc21C + chr2L_22_325001 chr2L_325001 RC1_1-HE 10 chr2L 347883 347917 chr2L 355384 355418 blood 9 7501 2.0 1.0 1.5 3.6 7535 chr2L 347883 3` UTR Plc21C + chr2L 351650 intron Plc21C + chr2L 355418 3` UTR Plc21C + chr2L_9_350001 chr2L_350001 RC1_1-HE 11 chr2L 407947 407972 chr2L 408029 408054 10 82 5.5 4.0 4.8 1.7 107 chr2L 407947 3` UTR RpI135 + chr2L 408000 intergenic AP-2alpha -,RpI135 + chr2L 408054 3` UTR AP-2alpha - chr2L_10_405001 chr2L_405001 RC1_1-HE 12 chr2L 514780 514794 chr2L 514890 514904 9 110 11.0 6.0 8.5 0.9 124 chr2L 514780 intron ush + chr2L 514842 intron ush + chr2L 514904 intron ush + chr2L_9_510001 chr2L_510001 RC1_1-HE 13 chr2L 544839 544857 chr2L 544923 544941 7 84 2.0 7.5 4.8 1.2 102 chr2L 544839 intergenic Ets21C -,Spp -,nAChRbeta3 + chr2L 544890 intergenic Ets21C -,Spp -,nAChRbeta3 + chr2L 544941 3` UTR Ets21C - chr2L_7_540001 chr2L_540001 RC1_1-HE 14 chr2L 600888 600922 chr2L 600985 601019 9 97 27.0 19.5 23.2 0.4 131 chr2L 600888 intergenic not near genes chr2L 600954 intergenic not near genes chr2L 601019 intergenic not near genes chr2L_9_600001 chr2L_600001 RC1_1-HE 15 chr2L 630309 630330 chr2L 630402 630415 9 91 2.5 2.0 2.2 2.8 106 chr2L 630309 intergenic not near genes chr2L 630362 intergenic not near genes chr2L 630415 intergenic not near genes chr2L_9_630001 chr2L_630001 RC1_1-HE 16 chr2L 660131 660168 chr2L 660209 660246 15 77 5.5 6.5 6.0 2.1 115 chr2L 660131 intron ds - chr2L 660188 intron ds - chr2L 660246 intron ds - chr2L_15_660001 chr2L_660001 RC1_1-HE 17 chr2L 686919 686951 chr2L 695957 695992 roo 12 9041 1.5 3.0 2.2 3.8 9073 chr2L 686919 intron ds - chr2L 691456 intron ds - chr2L 695992 intron ds - chr2L_12_690001 chr2L_690001 RC1_1-HE 18 chr2L 702166 702181 chr2L 702256 702264 11 89 7.5 3.5 5.5 1.7 98 chr2L 702166 intron ds - chr2L 702215 intron ds - chr2L 702264 intron ds - chr2L_11_700001 chr2L_700001 RC1_1-HE 19 chr2L 744841 744869 chr2L 744922 744950 16 81 4.0 6.5 5.2 2.6 109 chr2L 744841 intergenic Eaat2 - chr2L 744896 intergenic not near genes chr2L 744950 intergenic not near genes chr2L_16_740001 chr2L_740001 RC1_1-HE 20 chr2L 764564 764591 chr2L 764646 764673 5 82 3.5 3.5 3.5 1.1 109 chr2L 764564 intergenic not near genes chr2L 764618 intergenic not near genes chr2L 764673 intergenic not near genes chr2L_5_760001 chr2L_760001 RC1_1-HE 21 chr2L 770462 770494 chr2L 772244 772282 Bari1 7 1783 6.5 1.5 4.0 1.4 1820 chr2L 770462 intergenic not near genes chr2L 771372 intergenic not near genes chr2L 772282 intergenic CR44614 + chr2L_7_770001 chr2L_770001 RC1_1-HE 22 chr2L 931632 931668 chr2L 931712 931748 10 80 3.0 2.5 2.8 2.6 116 chr2L 931632 intron CG4341 + chr2L 931690 intron CG4341 + chr2L 931748 intron CG4341 + chr2L_10_930001 chr2L_930001 RC1_1-HE 23 chr2L 936578 936590 chr2L 936668 936681 8 91 0.0 1.0 0.5 5.3 103 chr2L 936578 intron CG4341 + chr2L 936630 intron CG4341 + chr2L 936681 intron CG4341 + chr2L_8_935001 chr2L_935001 RC1_1-HE 24 chr2L 953497 953527 chr2L 953582 953613 10 85 3.0 7.0 5.0 1.7 116 chr2L 953497 exon CG4341 + chr2L 953555 intron CG4341 + chr2L 953613 intron CG4341 + chr2L_10_950001 chr2L_950001 RC1_1-HE 25 chr2L 976880 976906 chr2L 984517 984543 roo 10 7637 5.5 3.5 4.5 1.8 7663 chr2L 976880 intergenic not near genes chr2L 980712 intergenic not near genes chr2L 984543 intergenic not near genes chr2L_10_980001 chr2L_980001 RC1_1-HE 26 chr2L 986350 986366 chr2L 986588 986604 11 238 3.5 4.0 3.8 2.3 254 chr2L 986350 intergenic not near genes chr2L 986477 intergenic not near genes chr2L 986604 intergenic not near genes chr2L_11_985001 chr2L_985001 RC1_1-HE 27 chr2L 992553 992556 chr2L 992642 992646 4 90 2.5 0.0 1.2 1.8 93 chr2L 992553 intergenic not near genes chr2L 992600 intergenic not near genes chr2L 992646 intergenic not near genes chr2L_4_990001 chr2L_990001 RC1_1-HE 28 chr2L 1041091 1041105 chr2L 1041241 1041255 5 150 4.5 1.5 3.0 1.2 164 chr2L 1041091 intron IA-2 - chr2L 1041173 intron IA-2 - chr2L 1041255 intron IA-2 - chr2L_5_1040001 chr2L_1040001 RC1_1-HE 29 chr2L 1042618 1042631 chr2L 1042696 1042709 4 78 5.0 0.0 2.5 1.1 91 chr2L 1042618 intron IA-2 - chr2L 1042664 intron IA-2 - chr2L 1042709 intron IA-2 - chr2L_4_1040001 chr2L_1040001 RC1_1-HE 30 chr2L 1048606 1048620 chr2L 1048683 1048697 4 77 1.5 4.5 3.0 1.0 91 chr2L 1048606 intergenic not near genes chr2L 1048652 intergenic not near genes chr2L 1048697 intergenic not near genes chr2L_4_1045001 chr2L_1045001 RC1_1-HE 31 chr2L 1220129 1220162 chr2L 1227596 1227629 blood 21 7466 4.0 3.0 3.5 4.7 7500 chr2L 1220129 intron CG42329 + chr2L 1223879 intron CG42329 + chr2L 1227629 intron CG42329 + chr2L_21_1220001 chr2L_1220001 RC1_1-HE 32 chr2L 1244410 1244436 chr2L 1244488 1244514 16 78 6.5 6.0 6.2 2.2 104 chr2L 1244410 intergenic not near genes chr2L 1244462 intergenic not near genes chr2L 1244514 intergenic not near genes chr2L_16_1240001 chr2L_1240001 RC1_1-HE 33 chr2L 1301752 1301784 chr2L 1302290 1302324 gypsy 8 540 0.0 6.0 3.0 2.0 572 chr2L 1301752 intergenic not near genes chr2L 1302038 intergenic not near genes chr2L 1302324 intergenic not near genes chr2L_8_1300001 chr2L_1300001 RC1_1-HE 34 chr2L 1322024 1322054 chr2L 1322114 1322144 9 90 3.0 3.0 3.0 2.2 120 chr2L 1322024 intergenic not near genes chr2L 1322084 intergenic not near genes chr2L 1322144 intergenic not near genes chr2L_9_1320001 chr2L_1320001 RC1_1-HE 35 chr2L 1536503 1536526 chr2L 1536636 1536659 15 133 0.0 7.0 3.5 3.3 156 chr2L 1536503 intergenic not near genes chr2L 1536581 intergenic not near genes chr2L 1536659 intergenic not near genes chr2L_15_1535001 chr2L_1535001 RC1_1-HE 36 chr2L 1570687 1570719 chr2L 1573560 1573592 F-element 15 2873 8.0 8.0 8.0 1.7 2905 chr2L 1570687 intron haf + chr2L 1572140 intron haf + chr2L 1573592 intron haf + chr2L_15_1570001 chr2L_1570001 RC1_1-HE 37 chr2L 1590955 1590989 chr2L 1591032 1591066 10 77 3.5 5.0 4.2 1.9 111 chr2L 1590955 intron haf + chr2L 1591010 intron haf + chr2L 1591066 intron haf + chr2L_10_1590001 chr2L_1590001 RC1_1-HE 38 chr2L 1615384 1615415 chr2L 1615467 1615498 17 83 3.5 5.0 4.2 3.3 114 chr2L 1615384 intergenic not near genes chr2L 1615441 intergenic not near genes chr2L 1615498 intergenic not near genes chr2L_17_1615001 chr2L_1615001 RC1_1-HE 39 chr2L 1678979 1679009 chr2L 1686445 1686475 blood 21 7465 5.0 9.5 7.2 2.6 7496 chr2L 1678979 intron chinmo + chr2L 1682727 intron chinmo + chr2L 1686475 intron chinmo + chr2L_21_1680001 chr2L_1680001 RC1_1-HE 40 chr2L 1711353 1711389 chr2L 1711678 1711693 mdg3 15 321 2.5 1.5 2.0 5.0 340 chr2L 1711353 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711523 3` UTR frtz - chr2L 1711693 3` UTR frtz - chr2L_15_1710001 chr2L_1710001 RC1_1-HE 41 chr2L 1823369 1823384 chr2L 1823447 1823462 4 78 0.0 3.5 1.8 1.4 93 chr2L 1823369 intergenic CG31933 - chr2L 1823416 intergenic CG31933 - chr2L 1823462 intergenic CG31933 - chr2L_4_1820001 chr2L_1820001 RC1_1-HE 42 chr2L 1847574 1847611 chr2L 1847668 1847704 12 94 4.0 3.5 3.8 2.5 130 chr2L 1847574 intron wry + chr2L 1847639 intron wry + chr2L 1847704 intron wry + chr2L_12_1845001 chr2L_1845001 RC1_1-HE 43 chr2L 1883865 1883894 chr2L 1883944 1883973 8 78 5.5 2.5 4.0 1.6 108 chr2L 1883865 exon CG15358 - chr2L 1883919 exon CG15358 - chr2L 1883973 exon CG15358 - chr2L_8_1880001 chr2L_1880001 RC1_1-HE 44 chr2L 1903373 1903405 chr2L 1903457 1903489 9 84 5.0 0.0 2.5 2.6 116 chr2L 1903373 intron CG7337 + chr2L 1903431 intron CG7337 + chr2L 1903489 intron CG7337 + chr2L_9_1900001 chr2L_1900001 RC1_1-HE 45 chr2L 1925487 1925501 chr2L 1925565 1925579 7 78 2.5 3.5 3.0 1.8 92 chr2L 1925487 intron CG7337 + chr2L 1925533 intron CG7337 + chr2L 1925579 intron CG7337 + chr2L_7_1925001 chr2L_1925001 RC1_1-HE 46 chr2L 1944308 1944325 chr2L 1944386 1944403 6 78 4.5 5.0 4.8 1.0 95 chr2L 1944308 intergenic CG7337 + chr2L 1944356 intergenic not near genes chr2L 1944403 intergenic not near genes chr2L_6_1940001 chr2L_1940001 RC1_1-HE 47 chr2L 1963250 1963273 chr2L 1963321 1963351 10 76 2.0 6.0 4.0 2.0 101 chr2L 1963250 intron erm - chr2L 1963300 intron erm - chr2L 1963351 intron erm - chr2L_10_1960001 chr2L_1960001 RC1_1-HE 48 chr2L 1967936 1967967 chr2L 1968186 1968217 13 250 1.0 0.5 0.8 7.2 281 chr2L 1967936 intron erm - chr2L 1968076 intron erm - chr2L 1968217 intron erm - chr2L_13_1965001 chr2L_1965001 RC1_1-HE 49 chr2L 1993202 1993227 chr2L 1993289 1993314 7 87 0.0 1.5 0.8 3.9 112 chr2L 1993202 intergenic not near genes chr2L 1993258 intergenic not near genes chr2L 1993314 intergenic not near genes chr2L_7_1990001 chr2L_1990001 RC1_1-HE 50 chr2L 2012555 2012588 chr2L 2012639 2012672 7 84 3.0 2.0 2.5 2.0 117 chr2L 2012555 intron CG4238 + chr2L 2012614 intron CG4238 + chr2L 2012672 intron CG4238 + chr2L_7_2010001 chr2L_2010001 RC1_1-HE 51 chr2L 2036646 2036684 chr2L 2036750 2036757 32 102 7.5 5.0 6.2 4.4 111 chr2L 2036646 exon lectin-22C - chr2L 2036702 exon lectin-22C - chr2L 2036757 exon lectin-22C - chr2L_32_2035001 chr2L_2035001 RC1_1-HE 52 chr2L 2073349 2073356 chr2L 2073432 2073440 4 84 11.0 16.5 13.8 0.3 91 chr2L 2073349 intron dpr3 - chr2L 2073394 intron dpr3 - chr2L 2073440 intron dpr3 - chr2L_4_2070001 chr2L_2070001 RC1_1-HE 53 chr2L 2093146 2093180 chr2L 2093294 2093328 9 148 2.5 3.0 2.8 2.4 182 chr2L 2093146 intron dpr3 - chr2L 2093237 intron dpr3 - chr2L 2093328 intron dpr3 - chr2L_9_2090001 chr2L_2090001 RC1_1-HE 54 chr2L 2100384 2100404 chr2L 2109524 2109556 roo 12 9150 6.0 4.0 5.0 2.0 9172 chr2L 2100384 intron dpr3 - chr2L 2104970 intron dpr3 - chr2L 2109556 intron dpr3 - chr2L_12_2100001 chr2L_2100001 RC1_1-HE 55 chr2L 2110277 2110298 chr2L 2110361 2110382 8 84 0.0 4.5 2.2 2.5 105 chr2L 2110277 intergenic dpr3 - chr2L 2110330 intergenic dpr3 - chr2L 2110382 intergenic not near genes chr2L_8_2110001 chr2L_2110001 RC1_1-HE 56 chr2L 2112132 2112146 chr2L 2119795 2119809 opus 6 7663 1.0 3.0 2.0 2.0 7677 chr2L 2112132 intergenic not near genes chr2L 2115970 intergenic not near genes chr2L 2119809 intergenic not near genes chr2L_6_2115001 chr2L_2115001 RC1_1-HE 57 chr2L 2121953 2121964 chr2L 2122105 2122114 4 152 6.0 2.0 4.0 0.8 161 chr2L 2121953 intergenic not near genes chr2L 2122034 intergenic not near genes chr2L 2122114 intergenic not near genes chr2L_4_2120001 chr2L_2120001 RC1_1-HE 58 chr2L 2199170 2199199 chr2L 2199254 2199283 15 82 4.5 4.5 4.5 2.7 113 chr2L 2199170 intergenic not near genes chr2L 2199226 intergenic not near genes chr2L 2199283 intergenic not near genes chr2L_15_2195001 chr2L_2195001 RC1_1-HE 59 chr2L 2207702 2207736 chr2L 2208176 2208207 10 468 1.0 5.0 3.0 2.5 505 chr2L 2207702 exon CG33124 - chr2L 2207954 exon CG33124 - chr2L 2208207 exon CG33124 - chr2L_10_2205001 chr2L_2205001 RC1_1-HE 60 chr2L 2250420 2250444 chr2L 2251188 2251212 6 768 8.0 0.0 4.0 1.2 792 chr2L 2250420 intergenic Ser12 - chr2L 2250816 exon Ser12 - chr2L 2251212 exon Ser12 - chr2L_6_2250001 chr2L_2250001 RC1_1-HE 61 chr2L 2254574 2254608 chr2L 2254695 2254729 5 116 1.0 1.0 1.0 2.5 155 chr2L 2254574 exon Send1 - chr2L 2254652 exon Send1 - chr2L 2254729 exon Send1 - chr2L_5_2250001 chr2L_2250001 RC1_1-HE 62 chr2L 2262313 2262339 chr2L 2262390 2262416 6 78 5.0 0.0 2.5 1.7 103 chr2L 2262313 intergenic not near genes chr2L 2262364 intergenic not near genes chr2L 2262416 intergenic not near genes chr2L_6_2260001 chr2L_2260001 RC1_1-HE 63 chr2L 2267853 2267881 chr2L 2267940 2267968 8 86 3.0 3.5 3.2 1.9 115 chr2L 2267853 intergenic CG17242 - chr2L 2267910 intergenic CG17242 - chr2L 2267968 intergenic CG17242 - chr2L_8_2265001 chr2L_2265001 RC1_1-HE 64 chr2L 2294046 2294071 chr2L 2299252 2299277 copia 10 5204 3.5 3.5 3.5 2.2 5231 chr2L 2294046 intergenic not near genes chr2L 2296662 intergenic not near genes chr2L 2299277 intergenic not near genes chr2L_10_2295001 chr2L_2295001 RC1_1-HE 65 chr2L 2311069 2311091 chr2L 2311166 2311188 14 97 3.5 0.0 1.8 5.0 119 chr2L 2311069 intron CG9967 - chr2L 2311128 intron CG9967 - chr2L 2311188 intron CG9967 - chr2L_14_2310001 chr2L_2310001 RC1_1-HE 66 chr2L 2319439 2319470 chr2L 2319534 2319567 4 91 4.5 0.5 2.5 1.1 128 chr2L 2319439 intron,intron CG9967 -,eys + chr2L 2319503 intron,intron CG9967 -,eys + chr2L 2319567 intron,intron CG9967 -,eys + chr2L_4_2315001 chr2L_2315001 RC1_1-HE 67 chr2L 2372363 2372402 chr2L 2372450 2372483 4 86 0.0 2.0 1.0 2.0 120 chr2L 2372363 intergenic CG3609 - chr2L 2372423 intergenic CG3609 - chr2L 2372483 3` UTR CG3609 - chr2L_4_2370001 chr2L_2370001 RC1_1-HE 68 chr2L 2380536 2380565 chr2L 2380614 2380643 11 78 3.0 6.0 4.5 2.0 107 chr2L 2380536 intergenic Atxn7 + chr2L 2380590 intergenic Atxn7 + chr2L 2380643 intergenic Atxn7 +,Eogt + chr2L_11_2380001 chr2L_2380001 RC1_1-HE 69 chr2L 2427381 2427400 chr2L 2427468 2427487 6 87 2.0 2.5 2.2 1.9 106 chr2L 2427381 3` UTR CR44912 - chr2L 2427434 3` UTR CR44912 - chr2L 2427487 3` UTR CR44912 - chr2L_6_2425001 chr2L_2425001 RC1_1-HE 70 chr2L 2439523 2439552 chr2L 2439610 2439612 5 78 3.5 1.0 2.2 1.6 89 chr2L 2439523 intron dpp + chr2L 2439568 intron dpp + chr2L 2439612 intron dpp + chr2L_5_2435001 chr2L_2435001 RC1_1-HE 71 chr2L 2481975 2482008 chr2L 2482056 2482089 12 81 6.5 4.0 5.2 1.9 114 chr2L 2481975 intergenic not near genes chr2L 2482032 intergenic not near genes chr2L 2482089 intergenic not near genes chr2L_12_2480001 chr2L_2480001 RC1_1-HE 72 chr2L 2501109 2501132 chr2L 2501257 2501280 6 148 4.0 1.5 2.8 1.6 171 chr2L 2501109 intergenic not near genes chr2L 2501194 intergenic not near genes chr2L 2501280 intergenic not near genes chr2L_6_2500001 chr2L_2500001 RC1_1-HE 73 chr2L 2503551 2503567 chr2L 2503637 2503664 4 94 3.0 7.0 5.0 0.7 113 chr2L 2503551 intergenic not near genes chr2L 2503608 intergenic not near genes chr2L 2503664 intergenic not near genes chr2L_4_2500001 chr2L_2500001 RC1_1-HE 74 chr2L 2503953 2503969 chr2L 2504246 2504262 5 293 0.0 4.0 2.0 1.7 309 chr2L 2503953 intergenic not near genes chr2L 2504108 intergenic not near genes chr2L 2504262 intergenic not near genes chr2L_5_2500001 chr2L_2500001 RC1_1-HE 75 chr2L 2518048 2518053 chr2L 2518144 2518149 5 96 10.5 0.0 5.2 0.8 101 chr2L 2518048 intergenic CG3528 - chr2L 2518098 intergenic CG3528 - chr2L 2518149 intergenic CG3528 - chr2L_5_2515001 chr2L_2515001 RC1_1-HE 76 chr2L 2661220 2661230 chr2L 2663033 2663069 I-element 4 1828 3.5 6.5 5.0 0.7 1849 chr2L 2661220 intergenic not near genes chr2L 2662144 intergenic not near genes chr2L 2663069 intergenic not near genes chr2L_4_2660001 chr2L_2660001 RC1_1-HE 77 chr2L 2664384 2664403 chr2L 2664463 2664485 14 84 5.5 7.0 6.2 1.9 101 chr2L 2664384 intergenic not near genes chr2L 2664434 intergenic not near genes chr2L 2664485 intergenic not near genes chr2L_14_2660001 chr2L_2660001 RC1_1-HE 78 chr2L 2700310 2700342 chr2L 2700389 2700421 11 78 4.5 4.0 4.2 2.1 111 chr2L 2700310 intron CG31690 + chr2L 2700366 intron CG31690 + chr2L 2700421 intron CG31690 + chr2L_11_2700001 chr2L_2700001 RC1_1-HE 79 chr2L 2772609 2772628 chr2L 2779194 2779213 297 5 6585 3.0 4.0 3.5 1.1 6604 chr2L 2772609 3` UTR Syt1 - chr2L 2775911 intron Syt1 - chr2L 2779213 3` UTR Syt1 - chr2L_5_2775001 chr2L_2775001 RC1_1-HE 80 chr2L 2800607 2800618 chr2L 2800691 2800702 7 84 6.5 0.0 3.2 1.7 95 chr2L 2800607 intergenic not near genes chr2L 2800654 intergenic not near genes chr2L 2800702 intergenic not near genes chr2L_7_2800001 chr2L_2800001 RC1_1-HE 81 chr2L 2805118 2805127 chr2L 2805202 2805211 7 83 17.0 13.0 15.0 0.4 93 chr2L 2805118 intergenic daw + chr2L 2805164 intergenic daw + chr2L 2805211 intergenic daw + chr2L_7_2805001 chr2L_2805001 RC1_1-HE 82 chr2L 2821893 2821926 chr2L 2821981 2822014 18 88 2.5 6.0 4.2 3.5 121 chr2L 2821893 intron Duox - chr2L 2821954 intron Duox - chr2L 2822014 intron Duox - chr2L_18_2820001 chr2L_2820001 RC1_1-HE 83 chr2L 2831082 2831092 chr2L 2831189 2831199 5 107 3.0 0.0 1.5 2.0 117 chr2L 2831082 intergenic not near genes chr2L 2831140 intergenic not near genes chr2L 2831199 intergenic not near genes chr2L_5_2830001 chr2L_2830001 RC1_1-HE 84 chr2L 2852461 2852482 chr2L 2852553 2852573 4 92 3.5 5.0 4.2 0.8 112 chr2L 2852461 intron CG3104 - chr2L 2852517 intron CG3104 - chr2L 2852573 intron CG3104 - chr2L_4_2850001 chr2L_2850001 RC1_1-HE 85 chr2L 2852487 2852495 chr2L 2852550 2852586 4 84 1.5 4.5 3.0 1.0 99 chr2L 2852487 intron CG3104 - chr2L 2852536 intron CG3104 - chr2L 2852586 intron CG3104 - chr2L_4_2850001 chr2L_2850001 RC1_1-HE 86 chr2L 2921040 2921072 chr2L 2921150 2921182 29 109 3.0 5.0 4.0 5.8 142 chr2L 2921040 intron lilli + chr2L 2921111 intron lilli + chr2L 2921182 intron lilli + chr2L_29_2920001 chr2L_2920001 RC1_1-HE 87 chr2L 2927948 2927969 chr2L 2928036 2928057 19 88 13.0 7.5 10.2 1.7 109 chr2L 2927948 intron lilli + chr2L 2928002 intron lilli + chr2L 2928057 intron lilli + chr2L_19_2925001 chr2L_2925001 RC1_1-HE 88 chr2L 2933300 2933326 chr2L 2935478 2935501 pogo 15 2177 7.5 6.5 7.0 1.9 2201 chr2L 2933300 intron lilli + chr2L 2934400 intron lilli + chr2L 2935501 intron lilli + chr2L_15_2930001 chr2L_2930001 RC1_1-HE 89 chr2L 2942021 2942051 chr2L 2942162 2942192 10 140 4.0 15.5 9.8 0.9 171 chr2L 2942021 intron lilli + chr2L 2942106 intron lilli + chr2L 2942192 intron lilli + chr2L_10_2940001 chr2L_2940001 RC1_1-HE 90 chr2L 2943790 2943823 chr2L 2943891 2943924 24 101 6.5 3.5 5.0 4.0 134 chr2L 2943790 intron lilli + chr2L 2943857 intron lilli + chr2L 2943924 intron lilli + chr2L_24_2940001 chr2L_2940001 RC1_1-HE 91 chr2L 3042052 3042075 chr2L 3042137 3042160 5 84 2.0 1.5 1.8 1.8 108 chr2L 3042052 intergenic CG17221 +,CG17261 + chr2L 3042106 intergenic CG17221 +,CG17261 + chr2L 3042160 intergenic CG17221 +,CG17261 + chr2L_5_3040001 chr2L_3040001 RC1_1-HE 92 chr2L 3049234 3049257 chr2L 3049321 3049344 6 87 2.5 2.5 2.5 1.7 110 chr2L 3049234 intron v(2)k05816 + chr2L 3049289 intron v(2)k05816 + chr2L 3049344 intron v(2)k05816 + chr2L_6_3045001 chr2L_3045001 RC1_1-HE 93 chr2L 3073030 3073054 chr2L 3078234 3078258 copia 6 5204 3.0 3.0 3.0 1.5 5228 chr2L 3073030 intron toc - chr2L 3075644 intron toc - chr2L 3078258 intron toc - chr2L_6_3075001 chr2L_3075001 RC1_1-HE 94 chr2L 3100527 3100555 chr2L 3100609 3100637 15 82 3.0 4.0 3.5 3.3 110 chr2L 3100527 intron toc - chr2L 3100582 intron toc - chr2L 3100637 intron toc - chr2L_15_3100001 chr2L_3100001 RC1_1-HE 95 chr2L 3108866 3108895 chr2L 3108944 3108973 18 78 7.5 3.5 5.5 2.8 107 chr2L 3108866 intron toc - chr2L 3108920 intron toc - chr2L 3108973 intron toc - chr2L_18_3105001 chr2L_3105001 RC1_1-HE 96 chr2L 3175898 3175923 chr2L 3176031 3176056 4 133 1.0 1.0 1.0 2.0 158 chr2L 3175898 intron CG34393 - chr2L 3175977 intron CG34393 - chr2L 3176056 intron CG34393 - chr2L_4_3175001 chr2L_3175001 RC1_1-HE 97 chr2L 3192206 3192242 chr2L 3192318 3192354 15 112 2.0 5.0 3.5 3.3 148 chr2L 3192206 exon CG34393 - chr2L 3192280 intron CG34393 - chr2L 3192354 intron CG34393 - chr2L_15_3190001 chr2L_3190001 RC1_1-HE 98 chr2L 3291242 3291265 chr2L 3291323 3291346 8 81 3.5 11.5 7.5 0.9 104 chr2L 3291242 intergenic CG9664 - chr2L 3291294 3` UTR CG9664 - chr2L 3291346 3` UTR CG9664 - chr2L_8_3290001 chr2L_3290001 RC1_1-HE 99 chr2L 3293223 3293253 chr2L 3296677 3296707 9 3454 25.0 23.5 24.2 0.4 3484 chr2L 3293223 exon CG9664 - chr2L 3294965 3` UTR CG9663 - chr2L 3296707 intron CG9663 - chr2L_9_3290001 chr2L_3290001 RC1_1-HE 100 chr2L 3312080 3312109 chr2L 3312186 3312215 7 106 0.0 2.5 1.2 3.2 135 chr2L 3312080 intron CG3277 + chr2L 3312148 intron CG3277 + chr2L 3312215 intron CG3277 + chr2L_7_3310001 chr2L_3310001 RC1_1-HE 101 chr2L 3388597 3388629 chr2L 3388839 3388871 pogo 10 242 2.0 2.0 2.0 3.3 274 chr2L 3388597 intergenic CG42460 - chr2L 3388734 intergenic CG42460 - chr2L 3388871 intergenic CG42460 -,CR44791 + chr2L_10_3385001 chr2L_3385001 RC1_1-HE 102 chr2L 3431353 3431389 chr2L 3431437 3431473 13 84 4.0 7.0 5.5 2.0 120 chr2L 3431353 intergenic not near genes chr2L 3431413 intergenic not near genes chr2L 3431473 intergenic not near genes chr2L_13_3430001 chr2L_3430001 RC1_1-HE 103 chr2L 3437156 3437162 chr2L 3437241 3437247 5 85 8.5 6.0 7.2 0.6 91 chr2L 3437156 intergenic not near genes chr2L 3437202 intergenic not near genes chr2L 3437247 intergenic not near genes chr2L_5_3435001 chr2L_3435001 RC1_1-HE 104 chr2L 3439436 3439454 chr2L 3439524 3439542 6 88 2.5 3.5 3.0 1.5 106 chr2L 3439436 intergenic not near genes chr2L 3439489 intergenic not near genes chr2L 3439542 intergenic not near genes chr2L_6_3435001 chr2L_3435001 RC1_1-HE 105 chr2L 3508352 3508376 chr2L 3508431 3508455 8 79 0.0 2.5 1.2 3.6 103 chr2L 3508352 intergenic tim -,CR45299 + chr2L 3508404 intergenic CR45299 +,tim - chr2L 3508455 intergenic CR45299 +,tim - chr2L_8_3505001 chr2L_3505001 RC1_1-HE 106 chr2L 3523031 3523055 chr2L 3523145 3523169 7 114 2.0 7.5 4.8 1.2 138 chr2L 3523031 exon Sr-CIV - chr2L 3523100 intron Sr-CIV - chr2L 3523169 exon Sr-CIV - chr2L_7_3520001 chr2L_3520001 RC1_1-HE 107 chr2L 3557706 3557742 chr2L 3557785 3557814 9 77 2.0 1.0 1.5 3.6 108 chr2L 3557706 intergenic not near genes chr2L 3557760 intergenic not near genes chr2L 3557814 intergenic not near genes chr2L_9_3555001 chr2L_3555001 RC1_1-HE 108 chr2L 3582880 3582911 chr2L 3582958 3582989 12 78 3.0 2.5 2.8 3.2 109 chr2L 3582880 intergenic not near genes chr2L 3582934 intergenic not near genes chr2L 3582989 intergenic not near genes chr2L_12_3580001 chr2L_3580001 RC1_1-HE 109 chr2L 3632264 3632277 chr2L 3632342 3632355 4 78 0.0 5.5 2.8 1.1 91 chr2L 3632264 intron for - chr2L 3632310 intron for - chr2L 3632355 intron for - chr2L_4_3630001 chr2L_3630001 RC1_1-HE 110 chr2L 3649785 3649808 chr2L 3654988 3655011 copia 7 5203 0.5 2.0 1.2 3.2 5226 chr2L 3649785 intron for - chr2L 3652398 intron for - chr2L 3655011 intron for - chr2L_7_3650001 chr2L_3650001 RC1_1-HE 111 chr2L 3815995 3816017 chr2L 3816079 3816101 16 84 4.5 2.5 3.5 3.6 106 chr2L 3815995 intergenic CR44076 + chr2L 3816048 intergenic CR44076 + chr2L 3816101 intergenic CR44076 + chr2L_16_3815001 chr2L_3815001 RC1_1-HE 112 chr2L 3819029 3819062 chr2L 3819112 3819145 12 83 2.0 0.0 1.0 6.0 116 chr2L 3819029 intergenic CR44077 + chr2L 3819087 intergenic not near genes chr2L 3819145 intergenic not near genes chr2L_12_3815001 chr2L_3815001 RC1_1-HE 113 chr2L 3819623 3819630 chr2L 3819700 3819707 7 77 0.0 8.5 4.2 1.3 84 chr2L 3819623 intergenic not near genes chr2L 3819665 intergenic not near genes chr2L 3819707 intergenic not near genes chr2L_7_3815001 chr2L_3815001 RC1_1-HE 114 chr2L 3881780 3881795 chr2L 3881867 3881882 5 87 2.0 4.5 3.2 1.2 102 chr2L 3881780 intron capu - chr2L 3881831 intron capu - chr2L 3881882 intron capu - chr2L_5_3880001 chr2L_3880001 RC1_1-HE 115 chr2L 3936623 3936655 chr2L 3936702 3936736 4 80 4.5 0.0 2.2 1.2 113 chr2L 3936623 intron fred - chr2L 3936680 intron fred - chr2L 3936736 intron fred - chr2L_4_3935001 chr2L_3935001 RC1_1-HE 116 chr2L 3943791 3943824 chr2L 3943883 3943916 12 92 4.0 2.5 3.2 2.9 125 chr2L 3943791 intron fred - chr2L 3943854 intron fred - chr2L 3943916 intron fred - chr2L_12_3940001 chr2L_3940001 RC1_1-HE 117 chr2L 3944905 3944934 chr2L 3944984 3945013 8 79 5.0 0.5 2.8 2.1 108 chr2L 3944905 intron fred - chr2L 3944959 intron fred - chr2L 3945013 intron fred - chr2L_8_3940001 chr2L_3940001 RC1_1-HE 118 chr2L 4066039 4066064 chr2L 4068865 4068890 Juan 10 2826 8.0 4.5 6.2 1.4 2851 chr2L 4066039 intron ed + chr2L 4067464 intron ed + chr2L 4068890 intron ed + chr2L_10_4065001 chr2L_4065001 RC1_1-HE 119 chr2L 4071497 4071527 chr2L 4071615 4071645 9 118 4.5 1.0 2.8 2.4 148 chr2L 4071497 intron ed + chr2L 4071571 intron ed + chr2L 4071645 intron ed + chr2L_9_4070001 chr2L_4070001 RC1_1-HE 120 chr2L 4119976 4119999 chr2L 4120055 4120078 10 78 1.0 4.5 2.8 2.6 102 chr2L 4119976 intergenic Sr-CIII + chr2L 4120027 intergenic Sr-CIII + chr2L 4120078 intergenic Sr-CIII + chr2L_10_4120001 chr2L_4120001 RC1_1-HE 121 chr2L 4129732 4129757 chr2L 4129820 4129845 18 88 0.0 8.5 4.2 3.5 113 chr2L 4129732 intergenic not near genes chr2L 4129788 intergenic not near genes chr2L 4129845 intergenic not near genes chr2L_18_4125001 chr2L_4125001 RC1_1-HE 122 chr2L 4137836 4137874 chr2L 4138117 4138155 18 280 3.0 5.0 4.0 3.6 319 chr2L 4137836 intergenic not near genes chr2L 4137996 intergenic not near genes chr2L 4138155 intergenic not near genes chr2L_18_4135001 chr2L_4135001 RC1_1-HE 123 chr2L 4141102 4141137 chr2L 4141180 4141215 18 78 2.5 3.5 3.0 4.5 113 chr2L 4141102 intergenic not near genes chr2L 4141158 intergenic not near genes chr2L 4141215 intergenic not near genes chr2L_18_4140001 chr2L_4140001 RC1_1-HE 124 chr2L 4166376 4166411 chr2L 4166460 4166495 12 84 1.0 5.0 3.0 3.0 119 chr2L 4166376 intergenic Or24a - chr2L 4166436 intergenic Or24a - chr2L 4166495 intergenic Or24a - chr2L_12_4165001 chr2L_4165001 RC1_1-HE 125 chr2L 4181295 4181305 chr2L 4183928 4183938 Burdock 4 2633 2.0 4.0 3.0 1.0 2643 chr2L 4181295 intergenic not near genes chr2L 4182616 intergenic not near genes chr2L 4183938 intergenic not near genes chr2L_4_4180001 chr2L_4180001 RC1_1-HE 126 chr2L 4243317 4243333 chr2L 4243396 4243412 7 79 4.0 3.0 3.5 1.6 95 chr2L 4243317 intergenic not near genes chr2L 4243364 intergenic not near genes chr2L 4243412 intergenic not near genes chr2L_7_4240001 chr2L_4240001 RC1_1-HE 127 chr2L 4246020 4246027 chr2L 4246097 4246104 8 76 10.0 7.0 8.5 0.8 84 chr2L 4246020 intergenic CR44059 - chr2L 4246062 intergenic CR44059 - chr2L 4246104 intergenic CR44059 - chr2L_8_4245001 chr2L_4245001 RC1_1-HE 128 chr2L 4280321 4280351 chr2L 4280423 4280453 12 102 2.0 2.0 2.0 4.0 132 chr2L 4280321 intron Art2 - chr2L 4280387 intron Art2 - chr2L 4280453 intron Art2 - chr2L_12_4280001 chr2L_4280001 RC1_1-HE 129 chr2L 4351474 4351502 chr2L 4351551 4351579 14 77 1.0 3.5 2.2 4.4 105 chr2L 4351474 intergenic CR44700 + chr2L 4351526 intergenic CR44700 + chr2L 4351579 intergenic CR44700 + chr2L_14_4350001 chr2L_4350001 RC1_1-HE 130 chr2L 4371995 4372019 chr2L 4372073 4372097 6 78 5.5 3.5 4.5 1.1 102 chr2L 4371995 intron Traf4 + chr2L 4372046 intron Traf4 + chr2L 4372097 intron Traf4 + chr2L_6_4370001 chr2L_4370001 RC1_1-HE 131 chr2L 4437213 4437241 chr2L 4437294 4437322 7 81 2.0 0.5 1.2 3.2 109 chr2L 4437213 intron CG15431 - chr2L 4437268 intron CG15431 - chr2L 4437322 intron CG15431 - chr2L_7_4435001 chr2L_4435001 RC1_1-HE 132 chr2L 4601701 4601736 chr2L 4609143 4609178 mdg1 9 7441 4.0 2.5 3.2 2.1 7477 chr2L 4601701 intron dp - chr2L 4605440 intron dp - chr2L 4609178 intron dp - chr2L_9_4605001 chr2L_4605001 RC1_1-HE 133 chr2L 4642704 4642716 chr2L 4642814 4642826 6 110 2.5 7.5 5.0 1.0 122 chr2L 4642704 3` UTR BG642163 + chr2L 4642765 3` UTR BG642163 + chr2L 4642826 3` UTR BG642163 + chr2L_6_4640001 chr2L_4640001 RC1_1-HE 134 chr2L 4819495 4819516 chr2L 4819619 4819640 7 124 3.0 3.5 3.2 1.7 145 chr2L 4819495 intergenic not near genes chr2L 4819568 intergenic not near genes chr2L 4819640 intergenic not near genes chr2L_7_4815001 chr2L_4815001 RC1_1-HE 135 chr2L 4841070 4841100 chr2L 4841147 4841177 11 72 4.0 4.5 4.2 2.1 107 chr2L 4841070 intron CG12194 + chr2L 4841124 intron CG12194 + chr2L 4841177 exon CG12194 + chr2L_11_4840001 chr2L_4840001 RC1_1-HE 136 chr2L 4853942 4853949 chr2L 4854022 4854029 4 80 3.0 3.0 3.0 1.0 87 chr2L 4853942 intron pog + chr2L 4853986 intron pog + chr2L 4854029 intron pog + chr2L_4_4850001 chr2L_4850001 RC1_1-HE 137 chr2L 4855552 4855574 chr2L 4855756 4855778 13 204 0.0 5.0 2.5 3.7 226 chr2L 4855552 intron pog + chr2L 4855665 intron pog + chr2L 4855778 intron pog + chr2L_13_4855001 chr2L_4855001 RC1_1-HE 138 chr2L 4858469 4858484 chr2L 4858558 4858573 10 89 2.5 3.0 2.8 2.6 104 chr2L 4858469 intron pog + chr2L 4858521 intron pog + chr2L 4858573 intron pog + chr2L_10_4855001 chr2L_4855001 RC1_1-HE 139 chr2L 4868950 4868974 chr2L 4869096 4869121 11 146 6.0 5.5 5.8 1.6 171 chr2L 4868950 intron pog + chr2L 4869036 intron pog + chr2L 4869121 intron pog + chr2L_11_4865001 chr2L_4865001 RC1_1-HE 140 chr2L 4996088 4996115 chr2L 4996166 4996193 6 78 2.5 2.5 2.5 1.7 105 chr2L 4996088 intron Rtnl1 - chr2L 4996140 intron Rtnl1 - chr2L 4996193 intron Rtnl1 - chr2L_6_4995001 chr2L_4995001 RC1_1-HE 141 chr2L 5056837 5056864 chr2L 5057036 5057063 10 199 2.5 2.0 2.2 3.1 226 chr2L 5056837 exon CG31918 - chr2L 5056950 exon CG31918 - chr2L 5057063 exon CG31918 - chr2L_10_5055001 chr2L_5055001 RC1_1-HE 142 chr2L 5265765 5265793 chr2L 5265909 5265925 14 143 1.0 2.5 1.8 5.0 160 chr2L 5265765 intron,exon tkv -,Cyp4ac1 + chr2L 5265845 intron,3` UTR tkv -,Cyp4ac1 + chr2L 5265925 intron tkv - chr2L_14_5265001 chr2L_5265001 RC1_1-HE 143 chr2L 5348835 5348876 chr2L 5348928 5348959 6 85 0.0 0.0 0.0 6.0 124 chr2L 5348835 intron nompC + chr2L 5348897 intron nompC + chr2L 5348959 intron nompC + chr2L_6_5345001 chr2L_5345001 RC1_1-HE 144 chr2L 5377724 5377746 chr2L 5377840 5377862 5 116 4.5 6.0 5.2 0.8 138 chr2L 5377724 intergenic not near genes chr2L 5377793 intergenic not near genes chr2L 5377862 intergenic not near genes chr2L_5_5375001 chr2L_5375001 RC1_1-HE 145 chr2L 5448009 5448029 chr2L 5448094 5448114 9 85 0.0 8.0 4.0 1.8 105 chr2L 5448009 intergenic not near genes chr2L 5448062 intergenic not near genes chr2L 5448114 intergenic not near genes chr2L_9_5445001 chr2L_5445001 RC1_1-HE 146 chr2L 5500053 5500072 chr2L 5500140 5500159 5 87 8.5 9.0 8.8 0.5 106 chr2L 5500053 intergenic not near genes chr2L 5500106 intergenic not near genes chr2L 5500159 intergenic not near genes chr2L_5_5500001 chr2L_5500001 RC1_1-HE 147 chr2L 5507290 5507319 chr2L 5507376 5507405 11 85 0.0 0.5 0.2 9.2 115 chr2L 5507290 intergenic not near genes chr2L 5507348 intergenic not near genes chr2L 5507405 intergenic not near genes chr2L_11_5505001 chr2L_5505001 RC1_1-HE 148 chr2L 5582328 5582345 chr2L 5582419 5582436 5 91 3.0 4.0 3.5 1.1 108 chr2L 5582328 intergenic not near genes chr2L 5582382 intergenic not near genes chr2L 5582436 intergenic not near genes chr2L_5_5580001 chr2L_5580001 RC1_1-HE 149 chr2L 5586804 5586842 chr2L 5586890 5586928 16 86 3.5 3.0 3.2 3.8 124 chr2L 5586804 intergenic CG7251 - chr2L 5586866 intergenic CG7251 - chr2L 5586928 intergenic CG7251 - chr2L_16_5585001 chr2L_5585001 RC1_1-HE 150 chr2L 5592407 5592415 chr2L 5592488 5592496 5 81 0.0 3.0 1.5 2.0 89 chr2L 5592407 intergenic not near genes chr2L 5592452 intergenic not near genes chr2L 5592496 intergenic not near genes chr2L_5_5590001 chr2L_5590001 RC1_1-HE 151 chr2L 5594319 5594436 chr2L 5594412 5594520 16 88 0.0 0.5 0.2 13.3 201 chr2L 5594319 intergenic not near genes chr2L 5594420 intergenic not near genes chr2L 5594520 intergenic not near genes chr2L_16_5590001 chr2L_5590001 RC1_1-HE 152 chr2L 5610168 5610177 chr2L 5610251 5610260 5 83 4.5 0.0 2.2 1.6 92 chr2L 5610168 intron CG14010 - chr2L 5610214 intron CG14010 - chr2L 5610260 intron CG14010 - chr2L_5_5610001 chr2L_5610001 RC1_1-HE 153 chr2L 5666292 5666324 chr2L 5666381 5666415 6 88 2.0 1.0 1.5 2.4 123 chr2L 5666292 intron Hsp60C + chr2L 5666354 intron Hsp60C + chr2L 5666415 intron Hsp60C + chr2L_6_5665001 chr2L_5665001 RC1_1-HE 154 chr2L 5709459 5709470 chr2L 5709554 5709565 4 95 0.0 5.5 2.8 1.1 106 chr2L 5709459 intron CG7236 + chr2L 5709512 intron CG7236 + chr2L 5709565 intron CG7236 + chr2L_4_5705001 chr2L_5705001 RC1_1-HE 155 chr2L 5709474 5709484 chr2L 5709566 5709579 6 94 0.0 6.5 3.2 1.4 105 chr2L 5709474 intron CG7236 + chr2L 5709526 intron CG7236 + chr2L 5709579 intron CG7236 + chr2L_6_5705001 chr2L_5705001 RC1_1-HE 156 chr2L 5827710 5827740 chr2L 5836719 5836749 roo 9 9009 1.0 3.0 2.0 3.0 9039 chr2L 5827710 intron TrissinR + chr2L 5832230 intron TrissinR + chr2L 5836749 intron TrissinR + chr2L_9_5830001 chr2L_5830001 RC1_1-HE 157 chr2L 5842802 5842833 chr2L 5842906 5842937 11 104 2.5 1.0 1.8 3.9 135 chr2L 5842802 intron TrissinR + chr2L 5842870 intron TrissinR + chr2L 5842937 intron TrissinR + chr2L_11_5840001 chr2L_5840001 RC1_1-HE 158 chr2L 5857591 5857616 chr2L 5857940 5857965 8 349 4.0 2.0 3.0 2.0 374 chr2L 5857591 intergenic not near genes chr2L 5857778 intergenic not near genes chr2L 5857965 intergenic not near genes chr2L_8_5855001 chr2L_5855001 RC1_1-HE 159 chr2L 5895940 5895966 chr2L 5896031 5896057 16 91 3.5 4.5 4.0 3.2 117 chr2L 5895940 intergenic not near genes chr2L 5895998 intergenic not near genes chr2L 5896057 intergenic not near genes chr2L_16_5895001 chr2L_5895001 RC1_1-HE 160 chr2L 5926268 5926455 chr2L 5926349 5926544 7 87 0.0 0.0 0.0 7.0 276 chr2L 5926268 intron dsf + chr2L 5926406 intron dsf + chr2L 5926544 intron dsf + chr2L_7_5925001 chr2L_5925001 RC1_1-HE 161 chr2L 5936567 5936586 chr2L 5936659 5936678 4 90 3.0 10.0 6.5 0.5 111 chr2L 5936567 exon dsf + chr2L 5936622 exon dsf + chr2L 5936678 exon dsf + chr2L_4_5935001 chr2L_5935001 RC1_1-HE 162 chr2L 5976974 5977007 chr2L 5977071 5977099 10 96 3.0 3.0 3.0 2.5 125 chr2L 5976974 intron chic - chr2L 5977036 intron chic - chr2L 5977099 intron chic - chr2L_10_5975001 chr2L_5975001 RC1_1-HE 163 chr2L 5989034 5989061 chr2L 5989111 5989138 7 77 4.5 0.5 2.5 2.0 104 chr2L 5989034 intergenic ifc +,lid - chr2L 5989086 intergenic ifc +,lid - chr2L 5989138 intergenic lid -,ifc + chr2L_7_5985001 chr2L_5985001 RC1_1-HE 164 chr2L 6021618 6021637 chr2L 6021697 6021716 10 79 7.5 0.0 3.8 2.1 98 chr2L 6021618 exon CG13996 + chr2L 6021667 exon CG13996 + chr2L 6021716 3` UTR CG13996 + chr2L_10_6020001 chr2L_6020001 RC1_1-HE 165 chr2L 6046317 6046341 chr2L 6046402 6046426 4 85 3.0 3.5 3.2 1.0 109 chr2L 6046317 intergenic ade2 -,CG34179 -,slmo - chr2L 6046372 intergenic CG34179 -,slmo -,ade2 - chr2L 6046426 intergenic CG34179 -,slmo -,ade2 - chr2L_4_6045001 chr2L_6045001 RC1_1-HE 166 chr2L 6103221 6103248 chr2L 6103298 6103326 9 78 1.0 3.0 2.0 3.0 105 chr2L 6103221 intron stai + chr2L 6103274 intron stai + chr2L 6103326 intron stai + chr2L_9_6100001 chr2L_6100001 RC1_1-HE 167 chr2L 6117468 6117477 chr2L 6117622 6117631 4 154 2.0 1.0 1.5 1.6 163 chr2L 6117468 intron stai + chr2L 6117550 intron stai + chr2L 6117631 intron stai + chr2L_4_6115001 chr2L_6115001 RC1_1-HE 168 chr2L 6136573 6136594 chr2L 6136663 6136684 5 90 1.0 2.0 1.5 2.0 111 chr2L 6136573 intergenic not near genes chr2L 6136628 intergenic not near genes chr2L 6136684 intergenic not near genes chr2L_5_6135001 chr2L_6135001 RC1_1-HE 169 chr2L 6151637 6151664 chr2L 6151716 6151743 11 79 3.5 2.0 2.8 2.9 106 chr2L 6151637 intergenic Muc26B + chr2L 6151690 intergenic Muc26B + chr2L 6151743 intergenic Muc26B + chr2L_11_6150001 chr2L_6150001 RC1_1-HE 170 chr2L 6215584 6215588 chr2L 6215688 6215688 5 114 0.0 5.0 2.5 1.4 104 chr2L 6215584 intergenic not near genes chr2L 6215636 intergenic not near genes chr2L 6215688 intergenic not near genes chr2L_5_6215001 chr2L_6215001 RC1_1-HE 171 chr2L 6231658 6231667 chr2L 6231741 6231750 6 83 9.5 0.0 4.8 1.0 92 chr2L 6231658 intergenic CR44823 + chr2L 6231704 intergenic CR44823 + chr2L 6231750 intergenic CR44823 + chr2L_6_6230001 chr2L_6230001 RC1_1-HE 172 chr2L 6268519 6268547 chr2L 6268606 6268634 8 87 3.0 0.0 1.5 3.2 115 chr2L 6268519 intron Ddr + chr2L 6268576 intron Ddr + chr2L 6268634 intron Ddr + chr2L_8_6265001 chr2L_6265001 RC1_1-HE 173 chr2L 6277048 6277084 chr2L 6277137 6277173 15 89 3.0 2.0 2.5 4.3 125 chr2L 6277048 intron Ddr + chr2L 6277110 intron Ddr + chr2L 6277173 intron Ddr + chr2L_15_6275001 chr2L_6275001 RC1_1-HE 174 chr2L 6363148 6363174 chr2L 6366071 6366097 Burdock 11 2923 7.0 2.5 4.8 1.9 2949 chr2L 6363148 intergenic not near genes chr2L 6364622 intergenic not near genes chr2L 6366097 intergenic not near genes chr2L_11_6360001 chr2L_6360001 RC1_1-HE 175 chr2L 6426853 6426885 chr2L 6445114 6445146 roo 8 18261 2.5 4.0 3.2 1.9 18293 chr2L 6426853 3` UTR CG9527 - chr2L 6436000 intron CG9527 - chr2L 6445146 exon CG9527 - chr2L_8_6435001 chr2L_6435001 RC1_1-HE 176 chr2L 6505013 6505048 chr2L 6505096 6505131 14 83 2.5 3.5 3.0 3.5 118 chr2L 6505013 intron CG31637 + chr2L 6505072 intron CG31637 + chr2L 6505131 intron CG31637 + chr2L_14_6505001 chr2L_6505001 RC1_1-HE 177 chr2L 6514416 6514440 chr2L 6514511 6514535 9 95 1.5 3.5 2.5 2.6 119 chr2L 6514416 intron CG31637 + chr2L 6514476 intron CG31637 + chr2L 6514535 intron CG31637 + chr2L_9_6510001 chr2L_6510001 RC1_1-HE 178 chr2L 6544370 6544394 chr2L 6544463 6544487 15 93 0.0 4.0 2.0 5.0 117 chr2L 6544370 intron eya - chr2L 6544428 intron eya - chr2L 6544487 intron eya - chr2L_15_6540001 chr2L_6540001 RC1_1-HE 179 chr2L 6551631 6551651 chr2L 6551716 6551736 6 85 0.0 0.5 0.2 5.0 105 chr2L 6551631 intergenic CR44776 + chr2L 6551684 intergenic CR44776 + chr2L 6551736 intergenic CR44776 + chr2L_6_6550001 chr2L_6550001 RC1_1-HE 180 chr2L 6552557 6552596 chr2L 6552638 6552677 14 81 3.0 9.5 6.2 1.9 120 chr2L 6552557 intergenic CR44776 + chr2L 6552617 intergenic CR44776 + chr2L 6552677 intergenic CR44776 + chr2L_14_6550001 chr2L_6550001 RC1_1-HE 181 chr2L 6564847 6564879 chr2L 6564941 6564973 10 92 1.0 3.5 2.2 3.1 126 chr2L 6564847 3` UTR CG13766 - chr2L 6564910 3` UTR CG13766 - chr2L 6564973 3` UTR CG13766 - chr2L_10_6560001 chr2L_6560001 RC1_1-HE 182 chr2L 6583520 6583541 chr2L 6583607 6583628 8 87 3.5 2.0 2.8 2.1 108 chr2L 6583520 intron CG11319 - chr2L 6583574 intron CG11319 - chr2L 6583628 intron CG11319 - chr2L_8_6580001 chr2L_6580001 RC1_1-HE 183 chr2L 6589961 6589978 chr2L 6590043 6590060 9 82 0.0 5.0 2.5 2.6 99 chr2L 6589961 intron CG11319 - chr2L 6590010 intron CG11319 - chr2L 6590060 intron CG11319 - chr2L_9_6590001 chr2L_6590001 RC1_1-HE 184 chr2L 6618945 6618975 chr2L 6619036 6619068 6 93 0.5 5.0 2.8 1.6 123 chr2L 6618945 intron CG11320 - chr2L 6619006 intron CG11320 - chr2L 6619068 intron CG11320 - chr2L_6_6615001 chr2L_6615001 RC1_1-HE 185 chr2L 6655527 6655552 chr2L 6655887 6655912 11 360 4.5 2.5 3.5 2.4 385 chr2L 6655527 exon CG31633 - chr2L 6655720 exon CG31633 - chr2L 6655912 exon CG31633 - chr2L_11_6655001 chr2L_6655001 RC1_1-HE 186 chr2L 6785304 6785337 chr2L 6785384 6785417 19 80 4.5 4.5 4.5 3.5 113 chr2L 6785304 intron nrv1 - chr2L 6785360 intron nrv1 - chr2L 6785417 intron nrv1 - chr2L_19_6785001 chr2L_6785001 RC1_1-HE 187 chr2L 6836731 6836764 chr2L 6836810 6836840 11 79 4.5 3.0 3.8 2.3 109 chr2L 6836731 intron sens-2 + chr2L 6836786 intron sens-2 + chr2L 6836840 intron sens-2 + chr2L_11_6835001 chr2L_6835001 RC1_1-HE 188 chr2L 6850377 6850413 chr2L 6850461 6850497 13 84 1.5 1.0 1.2 5.9 120 chr2L 6850377 intergenic not near genes chr2L 6850437 intergenic not near genes chr2L 6850497 intergenic not near genes chr2L_13_6850001 chr2L_6850001 RC1_1-HE 189 chr2L 6867767 6867772 chr2L 6867858 6867863 4 91 10.5 13.0 11.8 0.3 96 chr2L 6867767 intron Nha1 - chr2L 6867815 intron Nha1 - chr2L 6867863 intron Nha1 - chr2L_4_6865001 chr2L_6865001 RC1_1-HE 190 chr2L 6876777 6876809 chr2L 6882969 6882993 diver 9 6191 3.5 2.5 3.0 2.2 6216 chr2L 6876777 intron Nlg2 + chr2L 6879885 intron Nlg2 + chr2L 6882993 intron Nlg2 + chr2L_9_6875001 chr2L_6875001 RC1_1-HE 191 chr2L 6954585 6954593 chr2L 6954731 6954739 6 146 6.5 3.0 4.8 1.0 154 chr2L 6954585 3` UTR,exon SA +,CG13775 - chr2L 6954662 exon CG13775 - chr2L 6954739 exon CG13775 - chr2L_6_6950001 chr2L_6950001 RC1_1-HE 192 chr2L 6954594 6954601 chr2L 6954729 6954747 8 145 3.5 3.0 3.2 1.9 153 chr2L 6954594 exon CG13775 - chr2L 6954670 exon CG13775 - chr2L 6954747 exon CG13775 - chr2L_8_6950001 chr2L_6950001 RC1_1-HE 193 chr2L 6956598 6956607 chr2L 6956685 6956694 6 87 11.0 6.0 8.5 0.6 96 chr2L 6956598 intron CG13775 - chr2L 6956646 exon CG13775 - chr2L 6956694 exon CG13775 - chr2L_6_6955001 chr2L_6955001 RC1_1-HE 194 chr2L 6956608 6956631 chr2L 6956684 6956718 13 86 5.5 6.0 5.8 1.9 110 chr2L 6956608 intron CG13775 - chr2L 6956663 exon CG13775 - chr2L 6956718 exon CG13775 - chr2L_13_6955001 chr2L_6955001 RC1_1-HE 195 chr2L 7097261 7097291 chr2L 7097349 7097379 7 88 1.5 3.0 2.2 2.2 118 chr2L 7097261 intergenic not near genes chr2L 7097320 intergenic not near genes chr2L 7097379 intergenic not near genes chr2L_7_7095001 chr2L_7095001 RC1_1-HE 196 chr2L 7125788 7125798 chr2L 7125905 7125909 5 116 2.0 1.0 1.5 2.0 121 chr2L 7125788 intron Pvf3 - chr2L 7125848 intron Pvf3 - chr2L 7125909 intron Pvf3 - chr2L_5_7125001 chr2L_7125001 RC1_1-HE 197 chr2L 7165778 7165812 chr2L 7165860 7165894 10 82 5.5 2.0 3.8 2.1 116 chr2L 7165778 intergenic not near genes chr2L 7165836 intergenic not near genes chr2L 7165894 intergenic not near genes chr2L_10_7165001 chr2L_7165001 RC1_1-HE 198 chr2L 7247138 7247147 chr2L 7247222 7247231 4 84 8.0 0.5 4.2 0.8 93 chr2L 7247138 intron Ndae1 - chr2L 7247184 intron Ndae1 - chr2L 7247231 intron Ndae1 - chr2L_4_7245001 chr2L_7245001 RC1_1-HE 199 chr2L 7295995 7296024 chr2L 7296134 7296165 4 140 8.0 5.0 6.5 0.5 170 chr2L 7295995 intergenic not near genes chr2L 7296080 intergenic not near genes chr2L 7296165 intergenic not near genes chr2L_4_7295001 chr2L_7295001 RC1_1-HE 200 chr2L 7343326 7343330 chr2L 7350442 7350447 roo 4 7117 14.0 4.5 9.2 0.4 7121 chr2L 7343326 intron Wnt6 + chr2L 7346886 intron Wnt6 + chr2L 7350447 intron Wnt6 + chr2L_4_7345001 chr2L_7345001 RC1_1-HE 201 chr2L 7343334 7343345 chr2L 7350441 7350462 roo 8 7115 8.0 4.5 6.2 1.1 7128 chr2L 7343334 intron Wnt6 + chr2L 7346898 intron Wnt6 + chr2L 7350462 intron Wnt6 + chr2L_8_7345001 chr2L_7345001 RC1_1-HE 202 chr2L 7343353 7343359 chr2L 7350439 7350475 roo 4 7109 4.0 4.0 4.0 0.8 7122 chr2L 7343353 intron Wnt6 + chr2L 7346914 intron Wnt6 + chr2L 7350475 intron Wnt6 + chr2L_4_7345001 chr2L_7345001 RC1_1-HE 203 chr2L 7363524 7363554 chr2L 7363603 7363633 12 79 3.5 1.0 2.2 3.8 109 chr2L 7363524 5` UTR Wnt10 + chr2L 7363578 5` UTR Wnt10 + chr2L 7363633 5` UTR Wnt10 + chr2L_12_7360001 chr2L_7360001 RC1_1-HE 204 chr2L 7377890 7377902 chr2L 7377988 7378000 9 98 0.5 4.5 2.5 2.6 110 chr2L 7377890 intron ninaC + chr2L 7377945 intron ninaC + chr2L 7378000 intron ninaC + chr2L_9_7375001 chr2L_7375001 RC1_1-HE 205 chr2L 7564712 7564746 chr2L 7564795 7564829 8 83 4.0 1.5 2.8 2.1 117 chr2L 7564712 intron RapGAP1 - chr2L 7564770 intron RapGAP1 - chr2L 7564829 intron RapGAP1 - chr2L_8_7560001 chr2L_7560001 RC1_1-HE 206 chr2L 7602618 7602627 chr2L 7602698 7602707 8 80 7.0 0.5 3.8 1.7 89 chr2L 7602618 intergenic not near genes chr2L 7602662 intergenic not near genes chr2L 7602707 intergenic not near genes chr2L_8_7600001 chr2L_7600001 RC1_1-HE 207 chr2L 7669602 7669638 chr2L 7669684 7669720 16 82 3.0 4.5 3.8 3.3 118 chr2L 7669602 intron,intron Slob -,Myo28B1 + chr2L 7669661 intron,intron Slob -,Myo28B1 + chr2L 7669720 intron,intron Slob -,Myo28B1 + chr2L_16_7665001 chr2L_7665001 RC1_1-HE 208 chr2L 7676296 7676299 chr2L 7676579 7676582 5 283 5.5 0.0 2.8 1.3 286 chr2L 7676296 intron Myo28B1 + chr2L 7676439 intron Myo28B1 + chr2L 7676582 intron Myo28B1 + chr2L_5_7675001 chr2L_7675001 RC1_1-HE 209 chr2L 7723385 7723405 chr2L 7723469 7723489 11 84 8.5 3.0 5.8 1.6 104 chr2L 7723385 3` UTR CG13795 - chr2L 7723437 3` UTR CG13795 - chr2L 7723489 3` UTR CG13795 - chr2L_11_7720001 chr2L_7720001 RC1_1-HE 210 chr2L 7727050 7727079 chr2L 7727133 7727162 6 83 2.0 2.0 2.0 2.0 112 chr2L 7727050 intergenic CG13796 - chr2L 7727106 intergenic CG13796 - chr2L 7727162 3` UTR CG13796 - chr2L_6_7725001 chr2L_7725001 RC1_1-HE 211 chr2L 7766628 7766646 chr2L 7766705 7766712 10 76 6.5 0.0 3.2 2.4 84 chr2L 7766628 intergenic not near genes chr2L 7766670 intergenic not near genes chr2L 7766712 intergenic not near genes chr2L_10_7765001 chr2L_7765001 RC1_1-HE 212 chr2L 7768848 7768880 chr2L 7768925 7768957 22 77 0.0 5.0 2.5 6.3 109 chr2L 7768848 intron CG7191 + chr2L 7768902 intron CG7191 + chr2L 7768957 intron CG7191 + chr2L_22_7765001 chr2L_7765001 RC1_1-HE 213 chr2L 7829501 7829519 chr2L 7829597 7829615 7 96 2.5 3.0 2.8 1.8 114 chr2L 7829501 intron mts + chr2L 7829558 intron mts + chr2L 7829615 intron mts + chr2L_7_7825001 chr2L_7825001 RC1_1-HE 214 chr2L 7854254 7854283 chr2L 7854332 7854361 10 78 2.0 8.0 5.0 1.7 107 chr2L 7854254 intron CG14535 - chr2L 7854308 intron CG14535 - chr2L 7854361 intron CG14535 - chr2L_10_7850001 chr2L_7850001 RC1_1-HE 215 chr2L 7867567 7867603 chr2L 7867662 7867698 19 95 6.5 8.0 7.2 2.3 131 chr2L 7867567 intron Proc - chr2L 7867632 intron Proc - chr2L 7867698 intron Proc - chr2L_19_7865001 chr2L_7865001 RC1_1-HE 216 chr2L 7893582 7893593 chr2L 7893657 7893679 4 83 0.5 0.0 0.2 3.3 97 chr2L 7893582 3` UTR Snoo - chr2L 7893630 3` UTR Snoo - chr2L 7893679 3` UTR Snoo - chr2L_4_7890001 chr2L_7890001 RC1_1-HE 217 chr2L 7922765 7922776 chr2L 7922843 7922854 6 78 1.5 5.0 3.2 1.4 89 chr2L 7922765 intron Snoo - chr2L 7922810 intron Snoo - chr2L 7922854 intron Snoo - chr2L_6_7920001 chr2L_7920001 RC1_1-HE 218 chr2L 7977088 7977112 chr2L 7984052 7984087 297 7 6970 1.5 1.5 1.5 2.8 6999 chr2L 7977088 intron Snoo - chr2L 7980588 intron Snoo - chr2L 7984087 intron,5` UTR Snoo -,CG7231 + chr2L_7_7980001 chr2L_7980001 RC1_1-HE 219 chr2L 8003035 8003065 chr2L 8003118 8003148 9 83 2.5 0.5 1.5 3.6 113 chr2L 8003035 intron Wwox - chr2L 8003092 intron Wwox - chr2L 8003148 intron Wwox - chr2L_9_8000001 chr2L_8000001 RC1_1-HE 220 chr2L 8034588 8034593 chr2L 8034708 8034713 6 120 11.5 4.0 7.8 0.7 125 chr2L 8034588 intron,intron CG7367 -,Cka + chr2L 8034650 intron,intron CG7367 -,Cka + chr2L 8034713 intron,intron CG7367 -,Cka + chr2L_6_8030001 chr2L_8030001 RC1_1-HE 221 chr2L 8044068 8044089 chr2L 8044176 8044197 4 108 2.0 3.0 2.5 1.1 129 chr2L 8044068 exon CG7466 + chr2L 8044132 intron CG7466 + chr2L 8044197 intron CG7466 + chr2L_4_8040001 chr2L_8040001 RC1_1-HE 222 chr2L 8184923 8184935 chr2L 8185015 8185027 5 92 5.5 7.0 6.2 0.7 104 chr2L 8184923 intron Piezo + chr2L 8184975 intron Piezo + chr2L 8185027 intron Piezo + chr2L_5_8180001 chr2L_8180001 RC1_1-HE 223 chr2L 8184942 8184954 chr2L 8185013 8185046 4 87 4.0 6.5 5.2 0.6 104 chr2L 8184942 intron Piezo + chr2L 8184994 intron Piezo + chr2L 8185046 intron Piezo + chr2L_4_8180001 chr2L_8180001 RC1_1-HE 224 chr2L 8271620 8271655 chr2L 8271697 8271732 12 77 1.5 3.0 2.2 3.8 112 chr2L 8271620 intron Btk29A - chr2L 8271676 intron Btk29A - chr2L 8271732 intron Btk29A - chr2L_12_8270001 chr2L_8270001 RC1_1-HE 225 chr2L 8277857 8277868 chr2L 8277938 8277949 7 81 0.0 5.5 2.8 1.8 92 chr2L 8277857 intron Btk29A - chr2L 8277903 intron Btk29A - chr2L 8277949 intron Btk29A - chr2L_7_8275001 chr2L_8275001 RC1_1-HE 226 chr2L 8285019 8285034 chr2L 8285096 8285111 6 77 9.0 4.5 6.8 0.8 92 chr2L 8285019 intron Btk29A - chr2L 8285065 intron Btk29A - chr2L 8285111 intron Btk29A - chr2L_6_8285001 chr2L_8285001 RC1_1-HE 227 chr2L 8336933 8336966 chr2L 8337013 8337046 18 80 0.0 3.5 1.8 6.4 113 chr2L 8336933 intergenic not near genes chr2L 8336990 intergenic not near genes chr2L 8337046 intergenic not near genes chr2L_18_8335001 chr2L_8335001 RC1_1-HE 228 chr2L 8451857 8451860 chr2L 8451967 8451970 4 110 3.5 5.0 4.2 0.8 113 chr2L 8451857 5` UTR fu12 - chr2L 8451914 intron fu12 - chr2L 8451970 intron fu12 - chr2L_4_8450001 chr2L_8450001 RC1_1-HE 229 chr2L 8452420 8452452 chr2L 8461592 8461624 roo 14 9172 3.0 5.5 4.2 2.7 9204 chr2L 8452420 intron fu12 - chr2L 8457022 intron fu12 - chr2L 8461624 intron fu12 - chr2L_14_8455001 chr2L_8455001 RC1_1-HE 230 chr2L 8477235 8477263 chr2L 8477672 8477700 10 437 3.5 2.0 2.8 2.6 465 chr2L 8477235 intron d + chr2L 8477468 intron,intron d +,CheA29a + chr2L 8477700 intron,exon d +,CheA29a + chr2L_10_8475001 chr2L_8475001 RC1_1-HE 231 chr2L 8498210 8498237 chr2L 8498292 8498319 6 82 4.5 2.0 3.2 1.4 109 chr2L 8498210 intron Dh31 - chr2L 8498264 intron Dh31 - chr2L 8498319 intron Dh31 - chr2L_6_8495001 chr2L_8495001 RC1_1-HE 232 chr2L 8629266 8629296 chr2L 8629339 8629375 21 79 7.0 8.0 7.5 2.5 109 chr2L 8629266 intron Sema-1a + chr2L 8629320 intron Sema-1a + chr2L 8629375 intron Sema-1a + chr2L_21_8625001 chr2L_8625001 RC1_1-HE 233 chr2L 8657781 8657813 chr2L 8658072 8658104 19 291 3.0 7.0 5.0 3.2 323 chr2L 8657781 intron Sema-1a + chr2L 8657942 intron Sema-1a + chr2L 8658104 intron Sema-1a + chr2L_19_8655001 chr2L_8655001 RC1_1-HE 234 chr2L 8695819 8695849 chr2L 8695973 8696003 6 154 2.5 2.5 2.5 1.7 184 chr2L 8695819 intron Hnf4 - chr2L 8695911 intron Hnf4 - chr2L 8696003 intron Hnf4 - chr2L_6_8695001 chr2L_8695001 RC1_1-HE 235 chr2L 8716895 8716922 chr2L 8716984 8717009 13 89 2.0 0.5 1.2 5.9 114 chr2L 8716895 intron raw - chr2L 8716952 intron raw - chr2L 8717009 intron raw - chr2L_13_8715001 chr2L_8715001 RC1_1-HE 236 chr2L 8723123 8723146 chr2L 8731501 8731524 Tirant 12 8378 2.5 5.0 3.8 2.5 8401 chr2L 8723123 intron raw - chr2L 8727324 intron raw - chr2L 8731524 intron raw - chr2L_12_8725001 chr2L_8725001 RC1_1-HE 237 chr2L 8742766 8742937 chr2L 8742843 8743016 9 77 0.0 0.0 0.0 9.0 250 chr2L 8742766 intergenic not near genes chr2L 8742891 intergenic not near genes chr2L 8743016 intergenic not near genes chr2L_9_8740001 chr2L_8740001 RC1_1-HE 238 chr2L 8753282 8753316 chr2L 8753393 8753427 17 111 4.5 6.0 5.2 2.7 145 chr2L 8753282 intergenic CG12438 + chr2L 8753354 intergenic CG12438 + chr2L 8753427 intergenic CG12438 + chr2L_17_8750001 chr2L_8750001 RC1_1-HE 239 chr2L 8784840 8784870 chr2L 8784930 8784960 10 90 2.5 3.0 2.8 2.6 120 chr2L 8784840 intergenic not near genes chr2L 8784900 intergenic not near genes chr2L 8784960 intergenic not near genes chr2L_10_8780001 chr2L_8780001 RC1_1-HE 240 chr2L 8967115 8967139 chr2L 8967214 8967238 8 99 2.0 1.5 1.8 2.9 123 chr2L 8967115 intergenic CG32984 +,CG18088 + chr2L 8967176 intergenic CG32984 +,CG18088 + chr2L 8967238 intergenic CG32984 +,CG18088 + chr2L_8_8965001 chr2L_8965001 RC1_1-HE 241 chr2L 9000276 9000313 chr2L 9007787 9007824 roo 6 7511 3.5 1.5 2.5 1.7 7548 chr2L 9000276 intergenic Try29F + chr2L 9004050 intergenic not near genes chr2L 9007824 intergenic not near genes chr2L_6_9000001 chr2L_9000001 RC1_1-HE 242 chr2L 9040031 9040055 chr2L 9040119 9040143 9 88 5.0 1.5 3.2 2.1 112 chr2L 9040031 intergenic not near genes chr2L 9040087 intergenic not near genes chr2L 9040143 intergenic not near genes chr2L_9_9040001 chr2L_9040001 RC1_1-HE 243 chr2L 9046648 9046669 chr2L 9046725 9046746 15 77 1.0 4.0 2.5 4.3 98 chr2L 9046648 intergenic not near genes chr2L 9046697 intergenic not near genes chr2L 9046746 intergenic not near genes chr2L_15_9045001 chr2L_9045001 RC1_1-HE 244 chr2L 9073269 9073299 chr2L 9073356 9073386 14 86 0.0 4.0 2.0 4.7 117 chr2L 9073269 intergenic not near genes chr2L 9073328 intergenic not near genes chr2L 9073386 intergenic not near genes chr2L_14_9070001 chr2L_9070001 RC1_1-HE 245 chr2L 9097412 9097436 chr2L 9097508 9097532 18 96 4.5 3.5 4.0 3.6 120 chr2L 9097412 intergenic CG31609 + chr2L 9097472 intergenic CG31609 + chr2L 9097532 intergenic CG31609 + chr2L_18_9095001 chr2L_9095001 RC1_1-HE 246 chr2L 9118984 9119014 chr2L 9119065 9119095 16 81 4.5 3.5 4.0 3.2 111 chr2L 9118984 intergenic not near genes chr2L 9119040 intergenic not near genes chr2L 9119095 intergenic CR44617 + chr2L_16_9115001 chr2L_9115001 RC1_1-HE 247 chr2L 9158783 9158803 chr2L 9158880 9158881 10 95 6.0 0.5 3.2 2.4 98 chr2L 9158783 intron CG32982 + chr2L 9158832 intron CG32982 + chr2L 9158881 intron CG32982 + chr2L_10_9155001 chr2L_9155001 RC1_1-HE 248 chr2L 9175754 9175776 chr2L 9175858 9175880 7 104 4.5 0.0 2.2 2.2 126 chr2L 9175754 intron tai + chr2L 9175817 intron tai + chr2L 9175880 intron tai + chr2L_7_9175001 chr2L_9175001 RC1_1-HE 249 chr2L 9225851 9225879 chr2L 9225942 9225970 12 91 5.0 7.0 6.0 1.7 119 chr2L 9225851 intron tai + chr2L 9225910 intron tai + chr2L 9225970 intron tai + chr2L_12_9225001 chr2L_9225001 RC1_1-HE 250 chr2L 9259214 9259241 chr2L 9259308 9259335 7 94 3.5 2.0 2.8 1.8 121 chr2L 9259214 intron Ggamma30A + chr2L 9259274 intron Ggamma30A + chr2L 9259335 intron Ggamma30A + chr2L_7_9255001 chr2L_9255001 RC1_1-HE 251 chr2L 9297383 9297402 chr2L 9297456 9297480 5 77 4.5 6.5 5.5 0.8 97 chr2L 9297383 3` UTR Ggamma30A + chr2L 9297432 3` UTR Ggamma30A + chr2L 9297480 3` UTR Ggamma30A + chr2L_5_9295001 chr2L_9295001 RC1_1-HE 252 chr2L 9304504 9304520 chr2L 9304584 9304600 8 80 0.5 1.5 1.0 4.0 96 chr2L 9304504 3` UTR CR42844 - chr2L 9304552 3` UTR CR42844 - chr2L 9304600 3` UTR CR42844 - chr2L_8_9300001 chr2L_9300001 RC1_1-HE 253 chr2L 9311599 9311623 chr2L 9311685 9311709 6 86 4.5 1.0 2.8 1.6 110 chr2L 9311599 intergenic not near genes chr2L 9311654 intergenic not near genes chr2L 9311709 intergenic not near genes chr2L_6_9310001 chr2L_9310001 RC1_1-HE 254 chr2L 9346088 9346098 chr2L 9346170 9346180 5 82 0.0 3.5 1.8 1.8 92 chr2L 9346088 intergenic not near genes chr2L 9346134 intergenic not near genes chr2L 9346180 intergenic not near genes chr2L_5_9345001 chr2L_9345001 RC1_1-HE 255 chr2L 9387258 9387274 chr2L 9387357 9387373 5 99 3.0 6.5 4.8 0.9 115 chr2L 9387258 intron Shawl - chr2L 9387316 intron Shawl - chr2L 9387373 intron Shawl - chr2L_5_9385001 chr2L_9385001 RC1_1-HE 256 chr2L 9393496 9393529 chr2L 9396464 9396497 jockey 19 2967 4.0 4.0 4.0 3.8 3001 chr2L 9393496 intron Shawl - chr2L 9394996 intron Shawl - chr2L 9396497 intron Shawl - chr2L_19_9390001 chr2L_9390001 RC1_1-HE 257 chr2L 9414248 9414279 chr2L 9414368 9414399 11 120 4.5 2.5 3.5 2.4 151 chr2L 9414248 intron Shawl - chr2L 9414324 intron Shawl - chr2L 9414399 intron Shawl - chr2L_11_9410001 chr2L_9410001 RC1_1-HE 258 chr2L 9452475 9452490 chr2L 9452562 9452577 7 86 0.5 6.0 3.2 1.7 102 chr2L 9452475 intron numb + chr2L 9452526 intron numb + chr2L 9452577 intron numb + chr2L_7_9450001 chr2L_9450001 RC1_1-HE 259 chr2L 9464848 9464870 chr2L 9464941 9464963 6 93 2.0 4.5 3.2 1.4 115 chr2L 9464848 intergenic not near genes chr2L 9464906 intergenic not near genes chr2L 9464963 intergenic not near genes chr2L_6_9460001 chr2L_9460001 RC1_1-HE 260 chr2L 9473096 9473109 chr2L 9473199 9473212 4 103 0.5 0.0 0.2 3.3 116 chr2L 9473096 intergenic not near genes chr2L 9473154 intergenic not near genes chr2L 9473212 intergenic not near genes chr2L_4_9470001 chr2L_9470001 RC1_1-HE 261 chr2L 9474780 9474808 chr2L 9474875 9474903 8 94 1.0 2.5 1.8 2.9 123 chr2L 9474780 intergenic not near genes chr2L 9474842 intergenic not near genes chr2L 9474903 intergenic not near genes chr2L_8_9470001 chr2L_9470001 RC1_1-HE 262 chr2L 9506422 9506459 chr2L 9506573 9506610 16 151 2.0 2.0 2.0 5.3 188 chr2L 9506422 intron CG33298 + chr2L 9506516 intron CG33298 + chr2L 9506610 intron CG33298 + chr2L_16_9505001 chr2L_9505001 RC1_1-HE 263 chr2L 9523023 9523042 chr2L 9523108 9523127 6 85 2.5 6.5 4.5 1.1 104 chr2L 9523023 intron Oatp30B + chr2L 9523075 intron Oatp30B + chr2L 9523127 intron Oatp30B + chr2L_6_9520001 chr2L_9520001 RC1_1-HE 264 chr2L 9526848 9526874 chr2L 9526941 9526967 9 93 4.5 1.0 2.8 2.4 119 chr2L 9526848 intron Oatp30B + chr2L 9526908 intron Oatp30B + chr2L 9526967 intron Oatp30B + chr2L_9_9525001 chr2L_9525001 RC1_1-HE 265 chr2L 9610012 9610041 chr2L 9610097 9610126 11 85 4.0 6.5 5.2 1.8 114 chr2L 9610012 intron gcm2 + chr2L 9610069 intron gcm2 + chr2L 9610126 intron gcm2 + chr2L_11_9610001 chr2L_9610001 RC1_1-HE 266 chr2L 9633829 9633857 chr2L 9633957 9633985 10 128 1.5 3.5 2.5 2.9 156 chr2L 9633829 intergenic Apoltp + chr2L 9633907 intergenic Apoltp + chr2L 9633985 intergenic Apoltp + chr2L_10_9630001 chr2L_9630001 RC1_1-HE 267 chr2L 9672067 9672075 chr2L 9672153 9672161 4 86 1.5 0.0 0.8 2.2 94 chr2L 9672067 intergenic not near genes chr2L 9672114 intergenic not near genes chr2L 9672161 intergenic not near genes chr2L_4_9670001 chr2L_9670001 RC1_1-HE 268 chr2L 9733560 9733593 chr2L 9733653 9733686 26 93 6.0 6.5 6.2 3.6 126 chr2L 9733560 intron Nckx30C - chr2L 9733623 intron Nckx30C - chr2L 9733686 intron Nckx30C - chr2L_26_9730001 chr2L_9730001 RC1_1-HE 269 chr2L 9817203 9817241 chr2L 9817295 9817333 8 86 1.5 4.0 2.8 2.1 130 chr2L 9817203 intron nAChRalpha6 - chr2L 9817268 intron nAChRalpha6 - chr2L 9817333 intron nAChRalpha6 - chr2L_8_9815001 chr2L_9815001 RC1_1-HE 270 chr2L 9862387 9862394 chr2L 9862480 9862487 4 93 0.0 4.5 2.2 1.2 100 chr2L 9862387 intron nAChRalpha6 - chr2L 9862437 intron nAChRalpha6 - chr2L 9862487 intron nAChRalpha6 - chr2L_4_9860001 chr2L_9860001 RC1_1-HE 271 chr2L 9874238 9874256 chr2L 9874316 9874334 5 78 2.5 2.5 2.5 1.4 96 chr2L 9874238 intron nAChRalpha6 - chr2L 9874286 intron nAChRalpha6 - chr2L 9874334 intron nAChRalpha6 - chr2L_5_9870001 chr2L_9870001 RC1_1-HE 272 chr2L 9973726 9973759 chr2L 9980846 9980879 HMS-Beagle 12 7120 1.5 5.0 3.2 2.9 7153 chr2L 9973726 intergenic not near genes chr2L 9977302 intergenic not near genes chr2L 9980879 intergenic not near genes chr2L_12_9975001 chr2L_9975001 RC1_1-HE 273 chr2L 9982206 9982225 chr2L 9982310 9982329 8 104 0.0 7.0 3.5 1.8 123 chr2L 9982206 intergenic not near genes chr2L 9982268 intergenic not near genes chr2L 9982329 intergenic not near genes chr2L_8_9980001 chr2L_9980001 RC1_1-HE 274 chr2L 10099064 10099095 chr2L 10099141 10099172 9 77 4.0 3.5 3.8 1.9 108 chr2L 10099064 intron CG44153 - chr2L 10099118 intron CG44153 - chr2L 10099172 intron CG44153 - chr2L_9_10095001 chr2L_10095001 RC1_1-HE 275 chr2L 10105864 10105889 chr2L 10106010 10106035 9 146 7.0 0.0 3.5 2.0 171 chr2L 10105864 intron,intron CG44153 -,CG34109 + chr2L 10105950 intron,intron CG44153 -,CG34109 + chr2L 10106035 intron,intron CG44153 -,CG34109 + chr2L_9_10105001 chr2L_10105001 RC1_1-HE 276 chr2L 10153199 10153237 chr2L 10153278 10153316 18 77 4.5 4.5 4.5 3.3 117 chr2L 10153199 intron,exon CG44153 -,CG4839 + chr2L 10153258 intron,intron CG44153 -,CG4839 + chr2L 10153316 intron,intron CG44153 -,CG4839 + chr2L_18_10150001 chr2L_10150001 RC1_1-HE 277 chr2L 10156319 10156355 chr2L 10163790 10163826 blood 12 7471 5.5 2.0 3.8 2.5 7507 chr2L 10156319 intron,3` UTR CG44153 -,CG4839 + chr2L 10160072 intron CG44153 - chr2L 10163826 intron CG44153 - chr2L_12_10160001 chr2L_10160001 RC1_1-HE 278 chr2L 10180586 10180604 chr2L 10180674 10180691 5 88 2.5 0.5 1.5 2.0 105 chr2L 10180586 intergenic CG44153 - chr2L 10180638 intergenic CG44153 - chr2L 10180691 intergenic CG44153 - chr2L_5_10180001 chr2L_10180001 RC1_1-HE 279 chr2L 10232911 10232943 chr2L 10232990 10233022 9 79 1.5 2.5 2.0 3.0 111 chr2L 10232911 intron eEF1delta + chr2L 10232966 intron eEF1delta + chr2L 10233022 intron eEF1delta + chr2L_9_10230001 chr2L_10230001 RC1_1-HE 280 chr2L 10294674 10294683 chr2L 10294761 10294770 4 87 3.0 3.0 3.0 1.0 96 chr2L 10294674 intron Hand - chr2L 10294722 intron Hand - chr2L 10294770 intron Hand - chr2L_4_10290001 chr2L_10290001 RC1_1-HE 281 chr2L 10363965 10363973 chr2L 10364066 10364074 4 101 0.0 3.0 1.5 1.6 109 chr2L 10363965 3` UTR pim + chr2L 10364020 3` UTR pim + chr2L 10364074 3` UTR pim + chr2L_4_10360001 chr2L_10360001 RC1_1-HE 282 chr2L 10459328 10459353 chr2L 10459520 10459545 7 191 5.0 4.0 4.5 1.3 217 chr2L 10459328 intron LM408 + chr2L 10459436 exon LM408 + chr2L 10459545 intron LM408 + chr2L_7_10455001 chr2L_10455001 RC1_1-HE 283 chr2L 10495424 10495434 chr2L 10495501 10495511 4 77 0.0 5.5 2.8 1.1 87 chr2L 10495424 intron Myo31DF - chr2L 10495468 intron Myo31DF - chr2L 10495511 intron Myo31DF - chr2L_4_10495001 chr2L_10495001 RC1_1-HE 284 chr2L 10531611 10531644 chr2L 10531704 10531737 10 93 0.0 1.5 0.8 5.6 126 chr2L 10531611 3` UTR Lip4 + chr2L 10531674 3` UTR Lip4 + chr2L 10531737 3` UTR Lip4 + chr2L_10_10530001 chr2L_10530001 RC1_1-HE 285 chr2L 10571006 10571033 chr2L 10571084 10571106 4 74 3.0 4.0 3.5 0.9 100 chr2L 10571006 intron Trim9 + chr2L 10571056 intron Trim9 + chr2L 10571106 intron Trim9 + chr2L_4_10570001 chr2L_10570001 RC1_1-HE 286 chr2L 10589070 10589080 chr2L 10589147 10589157 9 77 1.5 3.5 2.5 2.6 87 chr2L 10589070 intron Trim9 + chr2L 10589114 intron Trim9 + chr2L 10589157 intron Trim9 + chr2L_9_10585001 chr2L_10585001 RC1_1-HE 287 chr2L 10592840 10592873 chr2L 10600503 10600535 opus 16 7663 4.5 5.0 4.8 2.8 7695 chr2L 10592840 intron Trim9 + chr2L 10596688 intron Trim9 + chr2L 10600535 intron Trim9 + chr2L_16_10595001 chr2L_10595001 RC1_1-HE 288 chr2L 10709999 10710026 chr2L 10710079 10710106 8 80 2.0 5.5 3.8 1.7 107 chr2L 10709999 intergenic CR44407 + chr2L 10710052 intergenic CR44407 + chr2L 10710106 5` UTR CR44407 + chr2L_8_10710001 chr2L_10710001 RC1_1-HE 289 chr2L 10727279 10727307 chr2L 10727391 10727419 8 112 1.0 0.0 0.5 5.3 140 chr2L 10727279 intron CG6431 + chr2L 10727349 intron CG6431 + chr2L 10727419 intron CG6431 + chr2L_8_10725001 chr2L_10725001 RC1_1-HE 290 chr2L 10747863 10747890 chr2L 10747954 10747981 7 91 2.5 1.0 1.8 2.5 118 chr2L 10747863 intron CG17124 - chr2L 10747922 intron CG17124 - chr2L 10747981 intron CG17124 - chr2L_7_10745001 chr2L_10745001 RC1_1-HE 291 chr2L 10793318 10793348 chr2L 10793396 10793426 10 78 2.0 2.5 2.2 3.1 108 chr2L 10793318 intron CG31869 - chr2L 10793372 intron CG31869 - chr2L 10793426 intron CG31869 - chr2L_10_10790001 chr2L_10790001 RC1_1-HE 292 chr2L 10808288 10808326 chr2L 10808662 10808700 23 374 4.5 6.0 5.2 3.7 412 chr2L 10808288 intron Nos - chr2L 10808494 intron Nos - chr2L 10808700 intron Nos - chr2L_23_10805001 chr2L_10805001 RC1_1-HE 293 chr2L 10836759 10836767 chr2L 10836839 10836841 4 78 5.5 1.0 3.2 1.0 82 chr2L 10836759 intron Nos - chr2L 10836800 intron Nos - chr2L 10836841 intron Nos - chr2L_4_10835001 chr2L_10835001 RC1_1-HE 294 chr2L 10898840 10898858 chr2L 10898926 10898944 8 86 5.0 4.5 4.8 1.4 104 chr2L 10898840 intergenic not near genes chr2L 10898892 intergenic not near genes chr2L 10898944 intergenic not near genes chr2L_8_10895001 chr2L_10895001 RC1_1-HE 295 chr2L 10944460 10944471 chr2L 10944544 10944555 7 84 3.5 6.5 5.0 1.2 95 chr2L 10944460 intron dpr2 - chr2L 10944508 intron dpr2 - chr2L 10944555 intron dpr2 - chr2L_7_10940001 chr2L_10940001 RC1_1-HE 296 chr2L 10945176 10945204 chr2L 10945274 10945302 6 98 2.0 2.5 2.2 1.9 126 chr2L 10945176 intron dpr2 - chr2L 10945239 intron dpr2 - chr2L 10945302 intron dpr2 - chr2L_6_10945001 chr2L_10945001 RC1_1-HE 297 chr2L 10946947 10946975 chr2L 10956163 10956191 roo 13 9216 1.5 4.5 3.0 3.2 9244 chr2L 10946947 intron dpr2 - chr2L 10951569 intron dpr2 - chr2L 10956191 intron dpr2 - chr2L_13_10950001 chr2L_10950001 RC1_1-HE 298 chr2L 11045813 11045848 chr2L 11045904 11045939 18 91 2.5 7.0 4.8 3.1 126 chr2L 11045813 intron Samuel - chr2L 11045876 intron Samuel - chr2L 11045939 intron Samuel - chr2L_18_11045001 chr2L_11045001 RC1_1-HE 299 chr2L 11049182 11049201 chr2L 11049390 11049409 13 208 4.5 6.0 5.2 2.1 227 chr2L 11049182 intron Samuel - chr2L 11049296 intron Samuel - chr2L 11049409 intron Samuel - chr2L_13_11045001 chr2L_11045001 RC1_1-HE 300 chr2L 11060449 11060482 chr2L 11060594 11060614 14 144 1.0 4.5 2.8 3.7 165 chr2L 11060449 intron Samuel - chr2L 11060532 intron Samuel - chr2L 11060614 intron Samuel - chr2L_14_11060001 chr2L_11060001 RC1_1-HE 301 chr2L 11083148 11083167 chr2L 11083226 11083245 6 78 4.0 7.5 5.8 0.9 97 chr2L 11083148 intergenic AstCC - chr2L 11083196 intergenic AstCC - chr2L 11083245 intergenic AstCC - chr2L_6_11080001 chr2L_11080001 RC1_1-HE 302 chr2L 11169501 11169518 chr2L 11169602 11169619 11 101 7.0 5.0 6.0 1.6 118 chr2L 11169501 intron Ca-beta - chr2L 11169560 intron Ca-beta - chr2L 11169619 intron Ca-beta - chr2L_11_11165001 chr2L_11165001 RC1_1-HE 303 chr2L 11174993 11174995 chr2L 11175101 11175103 4 108 0.5 3.0 1.8 1.4 110 chr2L 11174993 intron Ca-beta - chr2L 11175048 intron Ca-beta - chr2L 11175103 intron Ca-beta - chr2L_4_11175001 chr2L_11175001 RC1_1-HE 304 chr2L 11193583 11193592 chr2L 11193678 11193687 7 95 0.0 10.0 5.0 1.2 104 chr2L 11193583 intron Ca-beta - chr2L 11193635 intron Ca-beta - chr2L 11193687 intron Ca-beta - chr2L_7_11190001 chr2L_11190001 RC1_1-HE 305 chr2L 11255313 11255351 chr2L 11255402 11255440 10 88 1.5 3.0 2.2 3.1 127 chr2L 11255313 intron ab + chr2L 11255376 intron ab + chr2L 11255440 intron ab + chr2L_10_11255001 chr2L_11255001 RC1_1-HE 306 chr2L 11292373 11292403 chr2L 11292456 11292486 10 83 4.5 3.0 3.8 2.1 113 chr2L 11292373 intergenic not near genes chr2L 11292430 intergenic not near genes chr2L 11292486 intergenic not near genes chr2L_10_11290001 chr2L_11290001 RC1_1-HE 307 chr2L 11356116 11356139 chr2L 11356203 11356226 13 86 7.5 6.0 6.8 1.7 110 chr2L 11356116 intergenic not near genes chr2L 11356171 intergenic not near genes chr2L 11356226 intergenic not near genes chr2L_13_11355001 chr2L_11355001 RC1_1-HE 308 chr2L 11390725 11390754 chr2L 11390823 11390840 11 102 4.5 0.0 2.2 3.4 115 chr2L 11390725 3` UTR CR43681 - chr2L 11390782 3` UTR CR43681 - chr2L 11390840 3` UTR CR43681 - chr2L_11_11390001 chr2L_11390001 RC1_1-HE 309 chr2L 11404783 11404812 chr2L 11404860 11404889 18 77 3.5 4.5 4.0 3.6 106 chr2L 11404783 intergenic not near genes chr2L 11404836 intergenic not near genes chr2L 11404889 intergenic not near genes chr2L_18_11400001 chr2L_11400001 RC1_1-HE 310 chr2L 11450119 11450154 chr2L 11450206 11450237 8 84 0.0 4.0 2.0 2.7 118 chr2L 11450119 intergenic not near genes chr2L 11450178 intergenic not near genes chr2L 11450237 intergenic not near genes chr2L_8_11450001 chr2L_11450001 RC1_1-HE 311 chr2L 11480301 11480328 chr2L 11480550 11480577 7 249 2.0 3.5 2.8 1.8 276 chr2L 11480301 intergenic not near genes chr2L 11480439 intergenic not near genes chr2L 11480577 intergenic not near genes chr2L_7_11480001 chr2L_11480001 RC1_1-HE 312 chr2L 11485688 11485709 chr2L 11485765 11485786 6 77 1.0 2.0 1.5 2.4 98 chr2L 11485688 exon,5` UTR CG43355 +,sala + chr2L 11485737 3` UTR,5` UTR CG43355 +,sala + chr2L 11485786 intron,intron CG43355 +,sala + chr2L_6_11485001 chr2L_11485001 RC1_1-HE 313 chr2L 11489498 11489523 chr2L 11489575 11489600 8 77 1.5 2.5 2.0 2.7 102 chr2L 11489498 intergenic not near genes chr2L 11489549 intergenic not near genes chr2L 11489600 intergenic not near genes chr2L_8_11485001 chr2L_11485001 RC1_1-HE 314 chr2L 11540583 11540611 chr2L 11547986 11548014 Tabor 10 7403 2.0 7.0 4.5 1.8 7431 chr2L 11540583 intergenic not near genes chr2L 11544298 intergenic not near genes chr2L 11548014 intergenic not near genes chr2L_10_11540001 chr2L_11540001 RC1_1-HE 315 chr2L 11563633 11563652 chr2L 11568838 11568857 copia 10 5205 8.0 2.0 5.0 1.7 5224 chr2L 11563633 intergenic not near genes chr2L 11566245 intergenic not near genes chr2L 11568857 intergenic not near genes chr2L_10_11565001 chr2L_11565001 RC1_1-HE 316 chr2L 11610543 11610574 chr2L 11610623 11610653 7 80 3.5 4.5 4.0 1.4 110 chr2L 11610543 intron,3` UTR kek2 +,spag4 - chr2L 11610598 intron,3` UTR kek2 +,spag4 - chr2L 11610653 intron,3` UTR kek2 +,spag4 - chr2L_7_11610001 chr2L_11610001 RC1_1-HE 317 chr2L 11630456 11630491 chr2L 11630546 11630581 23 90 3.5 4.5 4.0 4.6 125 chr2L 11630456 intergenic not near genes chr2L 11630518 intergenic not near genes chr2L 11630581 intergenic not near genes chr2L_23_11630001 chr2L_11630001 RC1_1-HE 318 chr2L 11640439 11640454 chr2L 11640517 11640532 5 78 4.5 4.0 4.2 1.0 93 chr2L 11640439 intergenic not near genes chr2L 11640486 intergenic not near genes chr2L 11640532 intergenic not near genes chr2L_5_11640001 chr2L_11640001 RC1_1-HE 319 chr2L 11655569 11655597 chr2L 11655659 11655684 15 90 0.0 3.5 1.8 5.4 115 chr2L 11655569 intergenic not near genes chr2L 11655626 intergenic not near genes chr2L 11655684 intergenic not near genes chr2L_15_11655001 chr2L_11655001 RC1_1-HE 320 chr2L 11675578 11675589 chr2L 11675658 11675675 4 84 2.0 0.5 1.2 1.8 97 chr2L 11675578 intergenic not near genes chr2L 11675626 intergenic not near genes chr2L 11675675 intergenic not near genes chr2L_4_11675001 chr2L_11675001 RC1_1-HE 321 chr2L 11713508 11713538 chr2L 11720977 11721006 blood 15 7467 3.0 5.0 4.0 3.0 7498 chr2L 11713508 intergenic not near genes chr2L 11717257 intergenic not near genes chr2L 11721006 intergenic CR44143 + chr2L_15_11715001 chr2L_11715001 RC1_1-HE 322 chr2L 11726806 11726821 chr2L 11726889 11726889 4 83 3.0 4.0 3.5 0.9 83 chr2L 11726806 intergenic not near genes chr2L 11726848 intergenic not near genes chr2L 11726889 intergenic not near genes chr2L_4_11725001 chr2L_11725001 RC1_1-HE 323 chr2L 11752863 11752893 chr2L 11753154 11753184 11 291 1.5 2.0 1.8 3.9 321 chr2L 11752863 intergenic CG42470 - chr2L 11753024 3` UTR CG42470 - chr2L 11753184 3` UTR CG42470 - chr2L_11_11750001 chr2L_11750001 RC1_1-HE 324 chr2L 11825705 11825709 chr2L 11825785 11825789 4 80 1.5 0.0 0.8 2.2 84 chr2L 11825705 intron Pde1c - chr2L 11825747 intron Pde1c - chr2L 11825789 intron Pde1c - chr2L_4_11825001 chr2L_11825001 RC1_1-HE 325 chr2L 11828436 11828468 chr2L 11828513 11828545 10 77 3.0 5.5 4.2 1.9 109 chr2L 11828436 intron,intron Pde1c -,esc - chr2L 11828490 intron,intron Pde1c -,esc - chr2L 11828545 intron,intron Pde1c -,esc - chr2L_10_11825001 chr2L_11825001 RC1_1-HE 326 chr2L 11841365 11841393 chr2L 11841444 11841472 8 79 2.5 0.5 1.5 3.2 107 chr2L 11841365 intron Pde1c - chr2L 11841418 intron Pde1c - chr2L 11841472 intron Pde1c - chr2L_8_11840001 chr2L_11840001 RC1_1-HE 327 chr2L 11903965 11903988 chr2L 11904064 11904087 6 98 2.0 4.5 3.2 1.4 122 chr2L 11903965 intron Pde1c - chr2L 11904026 intron Pde1c - chr2L 11904087 intron Pde1c - chr2L_6_11900001 chr2L_11900001 RC1_1-HE 328 chr2L 11917008 11917044 chr2L 11917253 11917289 17 244 4.0 5.5 4.8 2.9 281 chr2L 11917008 intron Pde1c - chr2L 11917148 intron Pde1c - chr2L 11917289 intron Pde1c - chr2L_17_11915001 chr2L_11915001 RC1_1-HE 329 chr2L 11934809 11934844 chr2L 11935048 11935084 11 240 6.0 3.0 4.5 2.0 275 chr2L 11934809 exon Or33a + chr2L 11934946 exon Or33a + chr2L 11935084 exon Or33a + chr2L_11_11930001 chr2L_11930001 RC1_1-HE 330 chr2L 11951968 11951996 chr2L 11952057 11952085 11 89 1.0 2.5 1.8 3.9 117 chr2L 11951968 intergenic CR43314 - chr2L 11952026 intergenic CR43314 - chr2L 11952085 intergenic CR43314 - chr2L_11_11950001 chr2L_11950001 RC1_1-HE 331 chr2L 12013120 12013133 chr2L 12013231 12013244 7 111 2.0 4.5 3.2 1.7 124 chr2L 12013120 intergenic CR44588 + chr2L 12013182 intergenic CR44588 + chr2L 12013244 intergenic CR44588 + chr2L_7_12010001 chr2L_12010001 RC1_1-HE 332 chr2L 12029208 12029237 chr2L 12029289 12029318 6 81 3.5 2.0 2.8 1.6 110 chr2L 12029208 intron dmGlut + chr2L 12029263 intron dmGlut + chr2L 12029318 intron dmGlut + chr2L_6_12025001 chr2L_12025001 RC1_1-HE 333 chr2L 12067335 12067361 chr2L 12074388 12074414 297 7 7053 4.0 5.0 4.5 1.3 7079 chr2L 12067335 intergenic not near genes chr2L 12070874 intergenic not near genes chr2L 12074414 intergenic not near genes chr2L_7_12070001 chr2L_12070001 RC1_1-HE 334 chr2L 12113984 12114008 chr2L 12114070 12114094 11 86 3.0 2.0 2.5 3.1 110 chr2L 12113984 intergenic CG17211 + chr2L 12114039 intergenic CG17211 + chr2L 12114094 intergenic CG17211 + chr2L_11_12110001 chr2L_12110001 RC1_1-HE 335 chr2L 12125254 12125286 chr2L 12125334 12125365 15 80 7.0 5.5 6.2 2.1 111 chr2L 12125254 intron CG17211 + chr2L 12125310 intron CG17211 + chr2L 12125365 intron CG17211 + chr2L_15_12125001 chr2L_12125001 RC1_1-HE 336 chr2L 12155834 12155859 chr2L 12156135 12156160 9 301 2.0 3.5 2.8 2.4 326 chr2L 12155834 intron CG31760 + chr2L 12155997 intron CG31760 + chr2L 12156160 intron CG31760 + chr2L_9_12155001 chr2L_12155001 RC1_1-HE 337 chr2L 12169560 12169568 chr2L 12169641 12169649 5 81 3.5 0.5 2.0 1.7 89 chr2L 12169560 3` UTR CG31760 + chr2L 12169604 3` UTR CG31760 + chr2L 12169649 3` UTR CG31760 + chr2L_5_12165001 chr2L_12165001 RC1_1-HE 338 chr2L 12203294 12203323 chr2L 12203376 12203405 16 82 4.0 2.5 3.2 3.8 111 chr2L 12203294 intron aret + chr2L 12203350 intron aret + chr2L 12203405 intron aret + chr2L_16_12200001 chr2L_12200001 RC1_1-HE 339 chr2L 12258608 12258631 chr2L 12258762 12258785 11 154 2.5 8.0 5.2 1.8 177 chr2L 12258608 intron aret + chr2L 12258696 intron aret + chr2L 12258785 intron aret + chr2L_11_12255001 chr2L_12255001 RC1_1-HE 340 chr2L 12263450 12263486 chr2L 12263532 12263568 16 82 5.0 3.5 4.2 3.1 118 chr2L 12263450 intron aret + chr2L 12263509 intron aret + chr2L 12263568 intron aret + chr2L_16_12260001 chr2L_12260001 RC1_1-HE 341 chr2L 12272168 12272195 chr2L 12272245 12272272 10 77 1.0 4.5 2.8 2.6 104 chr2L 12272168 intron aret + chr2L 12272220 intron aret + chr2L 12272272 intron aret + chr2L_10_12270001 chr2L_12270001 RC1_1-HE 342 chr2L 12314303 12314338 chr2L 12314424 12314459 26 121 3.5 7.0 5.2 4.2 156 chr2L 12314303 intergenic not near genes chr2L 12314381 intergenic not near genes chr2L 12314459 intergenic not near genes chr2L_26_12310001 chr2L_12310001 RC1_1-HE 343 chr2L 12315945 12315978 chr2L 12316027 12316060 24 81 10.5 8.0 9.2 2.4 115 chr2L 12315945 3` UTR CR45282 - chr2L 12316002 3` UTR CR45282 - chr2L 12316060 3` UTR CR45282 - chr2L_24_12315001 chr2L_12315001 RC1_1-HE 344 chr2L 12366863 12366890 chr2L 12366950 12366977 8 87 6.5 5.5 6.0 1.1 114 chr2L 12366863 intron bru-2 + chr2L 12366920 intron bru-2 + chr2L 12366977 intron bru-2 + chr2L_8_12365001 chr2L_12365001 RC1_1-HE 345 chr2L 945736 945739 chr2L 12386837 12386840 4 11441101 9.5 19.0 14.2 0.3 11441104 chr2L 945736 intron CG4341 + chr2L 6666288 intron,intron,3` UTR CG34310 +,cup +,Galt - chr2L 12386840 intron bru-2 + chr2L_4_6665001 chr2L_6665001 RC1_1-HE 346 chr2L 12387888 12387922 chr2L 12387996 12388030 11 106 3.5 3.5 3.5 2.4 142 chr2L 12387888 intron bru-2 + chr2L 12387959 intron bru-2 + chr2L 12388030 intron bru-2 + chr2L_11_12385001 chr2L_12385001 RC1_1-HE 347 chr2L 12454463 12454471 chr2L 12454838 12454846 6 375 1.5 0.5 1.0 3.0 383 chr2L 12454463 intergenic not near genes chr2L 12454654 intergenic not near genes chr2L 12454846 intergenic not near genes chr2L_6_12450001 chr2L_12450001 RC1_1-HE 348 chr2L 12474780 12474793 chr2L 12474870 12474883 6 89 5.5 4.5 5.0 1.0 103 chr2L 12474780 intron bun - chr2L 12474832 intron bun - chr2L 12474883 intron bun - chr2L_6_12470001 chr2L_12470001 RC1_1-HE 349 chr2L 12487884 12487920 chr2L 12487966 12488002 13 82 5.0 7.0 6.0 1.9 118 chr2L 12487884 intron bun - chr2L 12487943 intron bun - chr2L 12488002 intron bun - chr2L_13_12485001 chr2L_12485001 RC1_1-HE 350 chr2L 12509509 12509562 chr2L 12509605 12509645 12 87 0.5 4.5 2.5 3.4 136 chr2L 12509509 intron bun - chr2L 12509577 intron bun - chr2L 12509645 intron bun - chr2L_12_12505001 chr2L_12505001 RC1_1-HE 351 chr2L 12523319 12523330 chr2L 12523399 12523410 9 80 15.5 7.0 11.2 0.7 91 chr2L 12523319 intron bun - chr2L 12523364 intron bun - chr2L 12523410 intron bun - chr2L_9_12520001 chr2L_12520001 RC1_1-HE 352 chr2L 12558317 12558352 chr2L 12565447 12565482 HMS-Beagle 11 7130 5.0 5.0 5.0 1.8 7165 chr2L 12558317 intergenic not near genes chr2L 12561900 intergenic not near genes chr2L 12565482 intergenic not near genes chr2L_11_12560001 chr2L_12560001 RC1_1-HE 353 chr2L 12581269 12581297 chr2L 12581356 12581384 16 86 3.5 4.5 4.0 3.2 115 chr2L 12581269 intergenic CR44596 + chr2L 12581326 intergenic CR44596 + chr2L 12581384 intergenic CR44596 + chr2L_16_12580001 chr2L_12580001 RC1_1-HE 354 chr2L 12656029 12656062 chr2L 12656112 12656145 17 80 8.0 5.0 6.5 2.3 116 chr2L 12656029 intergenic not near genes chr2L 12656087 intergenic not near genes chr2L 12656145 intergenic not near genes chr2L_17_12655001 chr2L_12655001 RC1_1-HE 355 chr2L 12677720 12677729 chr2L 12677806 12677815 4 86 3.5 6.5 5.0 0.7 95 chr2L 12677720 intron pdm2 + chr2L 12677768 intron pdm2 + chr2L 12677815 intron pdm2 + chr2L_4_12675001 chr2L_12675001 RC1_1-HE 356 chr2L 12729761 12729785 chr2L 12729840 12729864 9 79 4.5 4.5 4.5 1.6 103 chr2L 12729761 intron MRP + chr2L 12729812 intron MRP + chr2L 12729864 intron MRP + chr2L_9_12725001 chr2L_12725001 RC1_1-HE 357 chr2L 12731053 12731089 chr2L 12735821 12735857 F-element 12 4768 3.5 3.0 3.2 2.9 4804 chr2L 12731053 intron MRP + chr2L 12733455 intron MRP + chr2L 12735857 intron MRP + chr2L_12_12730001 chr2L_12730001 RC1_1-HE 358 chr2L 12760247 12760257 chr2L 12760344 12760354 5 97 3.5 4.0 3.8 1.0 107 chr2L 12760247 intergenic CG15483 - chr2L 12760300 intergenic CG15483 - chr2L 12760354 3` UTR CG15483 - chr2L_5_12760001 chr2L_12760001 RC1_1-HE 359 chr2L 12781794 12781813 chr2L 12789245 12789264 Quasimodo 9 7451 14.0 5.0 9.5 0.9 7470 chr2L 12781794 intergenic not near genes chr2L 12785529 intergenic not near genes chr2L 12789264 intergenic not near genes chr2L_9_12785001 chr2L_12785001 RC1_1-HE 360 chr2L 12791604 12791628 chr2L 12795280 12795304 F-element 10 3674 7.0 5.5 6.2 1.4 3700 chr2L 12791604 intergenic not near genes chr2L 12793454 intergenic not near genes chr2L 12795304 intergenic not near genes chr2L_10_12790001 chr2L_12790001 RC1_1-HE 361 chr2L 12848424 12848465 chr2L 12848517 12848554 9 89 1.5 3.5 2.5 2.6 130 chr2L 12848424 intergenic not near genes chr2L 12848489 intergenic not near genes chr2L 12848554 intergenic not near genes chr2L_9_12845001 chr2L_12845001 RC1_1-HE 362 chr2L 12861695 12861729 chr2L 12863163 12863197 hobo 16 1468 5.5 2.0 3.8 3.3 1502 chr2L 12861695 intergenic not near genes chr2L 12862446 intergenic not near genes chr2L 12863197 intergenic not near genes chr2L_16_12860001 chr2L_12860001 RC1_1-HE 363 chr2L 12894019 12894035 chr2L 12895487 12895503 hobo 11 1467 2.0 7.5 4.8 1.9 1484 chr2L 12894019 intergenic not near genes chr2L 12894761 intergenic not near genes chr2L 12895503 intergenic not near genes chr2L_11_12890001 chr2L_12890001 RC1_1-HE 364 chr2L 12894037 12894053 chr2L 12895484 12895521 hobo 7 1465 1.5 6.5 4.0 1.4 1484 chr2L 12894037 intergenic not near genes chr2L 12894779 intergenic not near genes chr2L 12895521 intergenic not near genes chr2L_7_12890001 chr2L_12890001 RC1_1-HE 365 chr2L 12933847 12933876 chr2L 12941315 12941344 blood 12 7468 2.5 3.0 2.8 3.2 7497 chr2L 12933847 intergenic not near genes chr2L 12937596 intergenic not near genes chr2L 12941344 intergenic not near genes chr2L_12_12935001 chr2L_12935001 RC1_1-HE 366 chr2L 12986346 12986360 chr2L 12986431 12986445 9 85 3.0 7.0 5.0 1.5 99 chr2L 12986346 intergenic not near genes chr2L 12986396 intergenic not near genes chr2L 12986445 intergenic not near genes chr2L_9_12985001 chr2L_12985001 RC1_1-HE 367 chr2L 13036240 13036271 chr2L 13036483 13036514 X-element 9 243 3.5 3.5 3.5 2.0 274 chr2L 13036240 intron CG9932 - chr2L 13036377 intron CG9932 - chr2L 13036514 intron CG9932 - chr2L_9_13035001 chr2L_13035001 RC1_1-HE 368 chr2L 13038065 13038080 chr2L 13038423 13038438 7 358 7.0 9.5 8.2 0.8 373 chr2L 13038065 intron CG9932 - chr2L 13038252 intron CG9932 - chr2L 13038438 intron CG9932 - chr2L_7_13035001 chr2L_13035001 RC1_1-HE 369 chr2L 13044737 13044770 chr2L 13044845 13044878 4 108 0.5 3.0 1.8 1.4 141 chr2L 13044737 intron CG9932 - chr2L 13044808 intron CG9932 - chr2L 13044878 intron CG9932 - chr2L_4_13040001 chr2L_13040001 RC1_1-HE 370 chr2L 13056039 13056047 chr2L 13056134 13056142 4 94 9.5 0.0 4.8 0.7 103 chr2L 13056039 intron CG9932 - chr2L 13056090 intron CG9932 - chr2L 13056142 intron CG9932 - chr2L_4_13055001 chr2L_13055001 RC1_1-HE 371 chr2L 13080128 13080149 chr2L 13080209 13080230 13 81 3.0 4.0 3.5 2.9 102 chr2L 13080128 intergenic not near genes chr2L 13080179 intergenic not near genes chr2L 13080230 intergenic not near genes chr2L_13_13080001 chr2L_13080001 RC1_1-HE 372 chr2L 13204316 13204347 chr2L 13204416 13204422 8 95 3.0 7.5 5.2 1.3 106 chr2L 13204316 intron Pect + chr2L 13204369 intron Pect + chr2L 13204422 intron Pect + chr2L_8_13200001 chr2L_13200001 RC1_1-HE 373 chr2L 13231882 13231911 chr2L 13231994 13232022 16 111 3.0 3.0 3.0 4.0 140 chr2L 13231882 intergenic Prosalpha6T + chr2L 13231952 intergenic Prosalpha6T + chr2L 13232022 intergenic Prosalpha6T + chr2L_16_13230001 chr2L_13230001 RC1_1-HE 374 chr2L 13235835 13235850 chr2L 13235912 13235927 4 77 3.5 4.0 3.8 0.8 92 chr2L 13235835 intergenic not near genes chr2L 13235881 intergenic not near genes chr2L 13235927 intergenic not near genes chr2L_4_13235001 chr2L_13235001 RC1_1-HE 375 chr2L 13241957 13241963 chr2L 13244342 13244348 BS 5 2385 0.5 2.5 1.5 2.0 2391 chr2L 13241957 5` UTR CR45330 + chr2L 13243152 intron CR45330 + chr2L 13244348 5` UTR CR45330 + chr2L_5_13240001 chr2L_13240001 RC1_1-HE 376 chr2L 13351819 13351849 chr2L 13351906 13351936 11 87 5.5 5.0 5.2 1.8 117 chr2L 13351819 exon CG9395 - chr2L 13351878 intron CG9395 - chr2L 13351936 exon CG9395 - chr2L_11_13350001 chr2L_13350001 RC1_1-HE 377 chr2L 13358252 13358256 chr2L 13358336 13358339 6 84 7.0 5.0 6.0 0.9 87 chr2L 13358252 intergenic not near genes chr2L 13358296 intergenic not near genes chr2L 13358339 intergenic not near genes chr2L_6_13355001 chr2L_13355001 RC1_1-HE 378 chr2L 13398721 13398749 chr2L 13398802 13398830 4 81 0.5 2.0 1.2 1.8 109 chr2L 13398721 intergenic CG10859 -,CR44600 -,CG7110 + chr2L 13398776 intergenic CR44600 -,CG10859 -,CG7110 + chr2L 13398830 intergenic CR44600 -,CG7110 +,CG10859 - chr2L_4_13395001 chr2L_13395001 RC1_1-HE 379 chr2L 13405646 13405683 chr2L 13410444 13410481 Doc 8 4798 1.5 2.5 2.0 2.7 4835 chr2L 13405646 exon CG7110 + chr2L 13408064 intron CG7110 + chr2L 13410481 intron CG7110 + chr2L_8_13405001 chr2L_13405001 RC1_1-HE 380 chr2L 13431740 13431749 chr2L 13431822 13431831 4 82 3.0 1.5 2.2 1.2 91 chr2L 13431740 intron CG42784 + chr2L 13431786 intron CG42784 + chr2L 13431831 intron CG42784 + chr2L_4_13430001 chr2L_13430001 RC1_1-HE 381 chr2L 13449467 13449494 chr2L 13456904 13456931 Quasimodo 10 7437 6.5 6.0 6.2 1.4 7464 chr2L 13449467 intron,5` UTR CG42784 +,Hsp60D - chr2L 13453199 intron CG42784 + chr2L 13456931 intron CG42784 + chr2L_10_13450001 chr2L_13450001 RC1_1-HE 382 chr2L 13481446 13481474 chr2L 13482054 13482082 jockey 18 608 9.0 7.5 8.2 2.0 636 chr2L 13481446 intron CG42784 + chr2L 13481764 intron CG42784 + chr2L 13482082 intron CG42784 + chr2L_18_13480001 chr2L_13480001 RC1_1-HE 383 chr2L 13535077 13535093 chr2L 13535212 13535228 6 135 5.5 4.0 4.8 1.0 151 chr2L 13535077 intron B4 - chr2L 13535152 intron B4 - chr2L 13535228 intron B4 - chr2L_6_13535001 chr2L_13535001 RC1_1-HE 384 chr2L 13560394 13560421 chr2L 13565216 13565243 F-element 15 4822 7.0 4.0 5.5 2.3 4849 chr2L 13560394 intron kuz + chr2L 13562818 intron kuz + chr2L 13565243 intron kuz + chr2L_15_13560001 chr2L_13560001 RC1_1-HE 385 chr2L 13583511 13583535 chr2L 13583636 13583660 6 125 2.5 4.5 3.5 1.3 149 chr2L 13583511 intron kuz + chr2L 13583586 intron kuz + chr2L 13583660 intron kuz + chr2L_6_13580001 chr2L_13580001 RC1_1-HE 386 chr2L 13628886 13628914 chr2L 13628967 13628980 17 80 3.5 6.0 4.8 2.9 94 chr2L 13628886 intron kuz + chr2L 13628933 intron kuz + chr2L 13628980 intron kuz + chr2L_17_13625001 chr2L_13625001 RC1_1-HE 387 chr2L 13713781 13713801 chr2L 13713860 13713880 11 79 7.0 8.5 7.8 1.2 99 chr2L 13713781 intron CG31814 - chr2L 13713830 intron CG31814 - chr2L 13713880 intron CG31814 - chr2L_11_13710001 chr2L_13710001 RC1_1-HE 388 chr2L 13761810 13761833 chr2L 13762922 13762945 Doc 9 1112 4.0 2.5 3.2 2.1 1135 chr2L 13761810 intron TM9SF4 + chr2L 13762378 intron TM9SF4 + chr2L 13762945 intron TM9SF4 + chr2L_9_13760001 chr2L_13760001 RC1_1-HE 389 chr2L 13800172 13800196 chr2L 13800277 13800301 7 105 4.0 0.5 2.2 2.2 129 chr2L 13800172 intergenic Sec71 + chr2L 13800236 intergenic not near genes chr2L 13800301 intergenic not near genes chr2L_7_13800001 chr2L_13800001 RC1_1-HE 390 chr2L 13853081 13853115 chr2L 13862232 13862266 roo 19 9151 5.5 4.0 4.8 3.3 9185 chr2L 13853081 intron CenG1A + chr2L 13857674 intron CenG1A + chr2L 13862266 intron CenG1A + chr2L_19_13855001 chr2L_13855001 RC1_1-HE 391 chr2L 13958829 13958849 chr2L 13958908 13958928 10 79 0.5 4.5 2.5 2.9 99 chr2L 13958829 intron NimA + chr2L 13958878 intron NimA + chr2L 13958928 intron NimA + chr2L_10_13955001 chr2L_13955001 RC1_1-HE 392 chr2L 13973982 13973993 chr2L 13974080 13974091 7 97 3.5 0.0 1.8 2.5 109 chr2L 13973982 3` UTR NimC1 - chr2L 13974036 3` UTR NimC1 - chr2L 13974091 3` UTR NimC1 - chr2L_7_13970001 chr2L_13970001 RC1_1-HE 393 chr2L 14087219 14087255 chr2L 14087296 14087333 21 77 6.5 6.5 6.5 2.8 114 chr2L 14087219 intron nAChRalpha5 + chr2L 14087276 intron nAChRalpha5 + chr2L 14087333 intron nAChRalpha5 + chr2L_21_14085001 chr2L_14085001 RC1_1-HE 394 chr2L 14160689 14160709 chr2L 14160776 14160796 4 87 5.0 1.5 3.2 1.0 107 chr2L 14160689 intergenic CG17341 +,CG43332 - chr2L 14160742 intergenic CG17341 +,CG43332 - chr2L 14160796 intergenic CG17341 +,CG43332 - chr2L_4_14160001 chr2L_14160001 RC1_1-HE 395 chr2L 14180061 14180090 chr2L 14180138 14180167 15 77 3.0 5.0 4.0 3.0 106 chr2L 14180061 intron CG43333 - chr2L 14180114 intron CG43333 - chr2L 14180167 intron CG43333 - chr2L_15_14180001 chr2L_14180001 RC1_1-HE 396 chr2L 14229627 14229644 chr2L 14229721 14229738 8 94 1.0 1.0 1.0 4.0 111 chr2L 14229627 intron Dyrk2 - chr2L 14229682 intron Dyrk2 - chr2L 14229738 intron Dyrk2 - chr2L_8_14225001 chr2L_14225001 RC1_1-HE 397 chr2L 14237118 14237124 chr2L 14237201 14237207 4 83 2.5 11.0 6.8 0.5 89 chr2L 14237118 intergenic not near genes chr2L 14237162 intergenic not near genes chr2L 14237207 intergenic not near genes chr2L_4_14235001 chr2L_14235001 RC1_1-HE 398 chr2L 14254139 14254162 chr2L 14254217 14254240 12 78 8.5 5.0 6.8 1.5 101 chr2L 14254139 intergenic not near genes chr2L 14254190 intergenic not near genes chr2L 14254240 intergenic not near genes chr2L_12_14250001 chr2L_14250001 RC1_1-HE 399 chr2L 14512772 14512805 chr2L 14512856 14512889 9 84 3.0 4.5 3.8 1.9 117 chr2L 14512772 intergenic not near genes chr2L 14512830 intergenic not near genes chr2L 14512889 intergenic not near genes chr2L_9_14510001 chr2L_14510001 RC1_1-HE 400 chr2L 14525566 14525599 chr2L 14525649 14525682 12 83 4.0 3.0 3.5 2.7 116 chr2L 14525566 exon CG33648 + chr2L 14525624 exon CG33648 + chr2L 14525682 intergenic CG33648 + chr2L_12_14525001 chr2L_14525001 RC1_1-HE 401 chr2L 14588386 14588394 chr2L 14588541 14588549 5 155 6.0 0.0 3.0 1.2 163 chr2L 14588386 intergenic CG42680 - chr2L 14588468 intergenic CG42680 - chr2L 14588549 intergenic CG42680 - chr2L_5_14585001 chr2L_14585001 RC1_1-HE 402 chr2L 14621931 14621959 chr2L 14622302 14622330 11 371 3.0 6.0 4.5 2.0 399 chr2L 14621931 intron osp - chr2L 14622130 intron osp - chr2L 14622330 intron osp - chr2L_11_14620001 chr2L_14620001 RC1_1-HE 403 chr2L 14664904 14664938 chr2L 14664991 14665025 18 87 6.5 1.0 3.8 3.8 121 chr2L 14664904 intron osp - chr2L 14664964 intron osp - chr2L 14665025 intron osp - chr2L_18_14660001 chr2L_14660001 RC1_1-HE 404 chr2L 14707205 14707239 chr2L 14707325 14707328 8 116 3.0 2.5 2.8 2.1 123 chr2L 14707205 intergenic not near genes chr2L 14707266 intergenic not near genes chr2L 14707328 intergenic not near genes chr2L_8_14705001 chr2L_14705001 RC1_1-HE 405 chr2L 14748923 14748955 chr2L 14749024 14749056 19 101 2.5 5.5 4.0 3.8 133 chr2L 14748923 intergenic not near genes chr2L 14748990 intergenic not near genes chr2L 14749056 intergenic not near genes chr2L_19_14745001 chr2L_14745001 RC1_1-HE 406 chr2L 14772712 14772734 chr2L 14772812 14772834 7 100 2.5 2.5 2.5 2.0 122 chr2L 14772712 intergenic not near genes chr2L 14772773 intergenic not near genes chr2L 14772834 intergenic not near genes chr2L_7_14770001 chr2L_14770001 RC1_1-HE 407 chr2L 14781560 14781588 chr2L 14781662 14781690 14 102 2.0 3.0 2.5 4.0 130 chr2L 14781560 intergenic not near genes chr2L 14781625 intergenic not near genes chr2L 14781690 intergenic not near genes chr2L_14_14780001 chr2L_14780001 RC1_1-HE 408 chr2L 14803878 14803912 chr2L 14809082 14809116 copia 13 5204 3.0 4.5 3.8 2.7 5238 chr2L 14803878 intergenic not near genes chr2L 14806497 intergenic not near genes chr2L 14809116 intergenic not near genes chr2L_13_14805001 chr2L_14805001 RC1_1-HE 409 chr2L 14836865 14836892 chr2L 14836946 14836973 15 79 4.5 4.5 4.5 2.7 108 chr2L 14836865 intergenic not near genes chr2L 14836919 intergenic not near genes chr2L 14836973 intergenic not near genes chr2L_15_14835001 chr2L_14835001 RC1_1-HE 410 chr2L 14857809 14857824 chr2L 14857894 14857909 5 85 0.0 5.5 2.8 1.3 100 chr2L 14857809 intergenic not near genes chr2L 14857859 intergenic not near genes chr2L 14857909 intergenic not near genes chr2L_5_14855001 chr2L_14855001 RC1_1-HE 411 chr2L 14889950 14889988 chr2L 14890376 14890414 jockey 24 426 3.5 3.5 3.5 5.3 464 chr2L 14889950 intergenic not near genes chr2L 14890182 intergenic not near genes chr2L 14890414 intergenic not near genes chr2L_24_14890001 chr2L_14890001 RC1_1-HE 412 chr2L 14943569 14943602 chr2L 14943711 14943744 16 142 4.0 3.5 3.8 3.3 175 chr2L 14943569 intron CG42313 - chr2L 14943656 intron CG42313 - chr2L 14943744 intron CG42313 - chr2L_16_14940001 chr2L_14940001 RC1_1-HE 413 chr2L 14945439 14945462 chr2L 14945536 14945559 7 97 4.0 1.0 2.5 2.0 120 chr2L 14945439 intron CG42313 - chr2L 14945499 intron CG42313 - chr2L 14945559 intron CG42313 - chr2L_7_14945001 chr2L_14945001 RC1_1-HE 414 chr2L 14973043 14973076 chr2L 14973124 14973157 14 81 2.0 5.0 3.5 3.1 114 chr2L 14973043 intergenic not near genes chr2L 14973100 intergenic not near genes chr2L 14973157 intergenic not near genes chr2L_14_14970001 chr2L_14970001 RC1_1-HE 415 chr2L 15053121 15053133 chr2L 15053199 15053211 4 78 1.0 3.0 2.0 1.3 90 chr2L 15053121 intron ck - chr2L 15053166 intron ck - chr2L 15053211 intron ck - chr2L_4_15050001 chr2L_15050001 RC1_1-HE 416 chr2L 15120922 15120958 chr2L 15121022 15121042 13 99 5.5 0.0 2.8 3.4 120 chr2L 15120922 intergenic CR43853 + chr2L 15120982 intergenic CR43853 + chr2L 15121042 intergenic CR43853 + chr2L_13_15120001 chr2L_15120001 RC1_1-HE 417 chr2L 15122605 15122803 chr2L 15122690 15122884 20 81 2.0 7.0 4.5 3.6 279 chr2L 15122605 intergenic not near genes chr2L 15122744 intergenic not near genes chr2L 15122884 intergenic not near genes chr2L_20_15120001 chr2L_15120001 RC1_1-HE 418 chr2L 15313007 15313040 chr2L 15313103 15313135 5 94 7.0 0.5 3.8 1.0 128 chr2L 15313007 intergenic not near genes chr2L 15313071 intergenic not near genes chr2L 15313135 intergenic not near genes chr2L_5_15310001 chr2L_15310001 RC1_1-HE 419 chr2L 15318996 15319013 chr2L 15319068 15319091 9 77 0.5 10.5 5.5 1.4 95 chr2L 15318996 intergenic nht - chr2L 15319044 intergenic nht - chr2L 15319091 intergenic nht - chr2L_9_15315001 chr2L_15315001 RC1_1-HE 420 chr2L 15444520 15444525 chr2L 15444600 15444605 4 80 0.0 0.5 0.2 3.3 85 chr2L 15444520 intergenic not near genes chr2L 15444562 intergenic not near genes chr2L 15444605 intergenic not near genes chr2L_4_15440001 chr2L_15440001 RC1_1-HE 421 chr2L 15446050 15446083 chr2L 15453520 15453553 blood 15 7470 3.5 2.0 2.8 3.9 7503 chr2L 15446050 intergenic not near genes chr2L 15449802 intergenic not near genes chr2L 15453553 intergenic not near genes chr2L_15_15445001 chr2L_15445001 RC1_1-HE 422 chr2L 15478985 15479021 chr2L 15479201 15479237 23 215 6.5 4.0 5.2 3.7 252 chr2L 15478985 intergenic not near genes chr2L 15479111 intergenic not near genes chr2L 15479237 intergenic not near genes chr2L_23_15475001 chr2L_15475001 RC1_1-HE 423 chr2L 15482582 15482605 chr2L 15482719 15482742 9 137 7.0 8.0 7.5 1.1 160 chr2L 15482582 intergenic not near genes chr2L 15482662 intergenic not near genes chr2L 15482742 intergenic not near genes chr2L_9_15480001 chr2L_15480001 RC1_1-HE 424 chr2L 15490036 15490050 chr2L 15490117 15490131 7 81 0.5 2.5 1.5 2.8 95 chr2L 15490036 intergenic not near genes chr2L 15490084 intergenic not near genes chr2L 15490131 intergenic not near genes chr2L_7_15490001 chr2L_15490001 RC1_1-HE 425 chr2L 15527432 15527460 chr2L 15527511 15527540 4 78 0.5 5.5 3.0 1.0 108 chr2L 15527432 intergenic not near genes chr2L 15527486 intergenic not near genes chr2L 15527540 intergenic not near genes chr2L_4_15525001 chr2L_15525001 RC1_1-HE 426 chr2L 15553709 15553748 chr2L 15553790 15553828 5 80 2.0 1.5 1.8 1.8 119 chr2L 15553709 intron kek3 + chr2L 15553768 intron kek3 + chr2L 15553828 intron kek3 + chr2L_5_15550001 chr2L_15550001 RC1_1-HE 427 chr2L 15586410 15586438 chr2L 15593460 15593491 297 13 7053 4.0 5.0 4.5 2.4 7081 chr2L 15586410 intergenic not near genes chr2L 15589950 intergenic not near genes chr2L 15593491 intergenic not near genes chr2L_13_15585001 chr2L_15585001 RC1_1-HE 428 chr2L 15597688 15597709 chr2L 15597918 15597939 13 230 2.0 3.0 2.5 3.7 251 chr2L 15597688 intergenic not near genes chr2L 15597814 intergenic not near genes chr2L 15597939 intergenic not near genes chr2L_13_15595001 chr2L_15595001 RC1_1-HE 429 chr2L 15598768 15598800 chr2L 15598848 15598880 5 80 2.0 2.0 2.0 1.7 112 chr2L 15598768 intergenic not near genes chr2L 15598824 intergenic not near genes chr2L 15598880 intergenic not near genes chr2L_5_15595001 chr2L_15595001 RC1_1-HE 430 chr2L 15829313 15829347 chr2L 15829572 15829606 12 259 1.5 3.5 2.5 3.4 293 chr2L 15829313 intergenic not near genes chr2L 15829460 intergenic not near genes chr2L 15829606 intergenic not near genes chr2L_12_15825001 chr2L_15825001 RC1_1-HE 431 chr2L 15843304 15843313 chr2L 15845808 15845815 5 2504 21.0 20.5 20.8 0.2 2511 chr2L 15843304 intergenic not near genes chr2L 15844560 intergenic not near genes chr2L 15845815 intergenic not near genes chr2L_5_15840001 chr2L_15840001 RC1_1-HE 432 chr2L 15843477 15843501 chr2L 15843577 15843580 13 97 2.5 4.0 3.2 3.1 103 chr2L 15843477 intergenic not near genes chr2L 15843528 intergenic not near genes chr2L 15843580 intergenic not near genes chr2L_13_15840001 chr2L_15840001 RC1_1-HE 433 chr2L 15843190 15843197 chr2L 15845901 15845930 8 2714 18.5 32.5 25.5 0.3 2740 chr2L 15843190 intergenic not near genes chr2L 15844560 intergenic not near genes chr2L 15845930 intergenic not near genes chr2L_8_15840001 chr2L_15840001 RC1_1-HE 434 chr2L 15865805 15865840 chr2L 15865918 15865953 12 113 1.5 3.0 2.2 3.8 148 chr2L 15865805 intergenic CG42792 - chr2L 15865879 intergenic CG42792 - chr2L 15865953 intergenic CG42792 - chr2L_12_15865001 chr2L_15865001 RC1_1-HE 435 chr2L 15866618 15866644 chr2L 15866696 15866714 9 76 3.5 1.5 2.5 2.6 96 chr2L 15866618 intergenic not near genes chr2L 15866666 intergenic not near genes chr2L 15866714 intergenic not near genes chr2L_9_15865001 chr2L_15865001 RC1_1-HE 436 chr2L 15906184 15906211 chr2L 15906274 15906301 5 88 3.0 1.0 2.0 1.7 117 chr2L 15906184 intron beat-Ib - chr2L 15906242 intron beat-Ib - chr2L 15906301 intron beat-Ib - chr2L_5_15905001 chr2L_15905001 RC1_1-HE 437 chr2L 15907916 15907940 chr2L 15907996 15908020 4 80 1.5 2.5 2.0 1.3 104 chr2L 15907916 intron beat-Ib - chr2L 15907968 intron beat-Ib - chr2L 15908020 intron beat-Ib - chr2L_4_15905001 chr2L_15905001 RC1_1-HE 438 chr2L 15935213 15935221 chr2L 15935304 15935312 7 91 0.5 2.5 1.5 2.8 99 chr2L 15935213 intron beat-Ib - chr2L 15935262 intron beat-Ib - chr2L 15935312 intron beat-Ib - chr2L_7_15935001 chr2L_15935001 RC1_1-HE 439 chr2L 15950383 15950417 chr2L 15950462 15950496 6 79 4.0 3.5 3.8 1.2 113 chr2L 15950383 intron beat-Ib - chr2L 15950440 intron beat-Ib - chr2L 15950496 intron beat-Ib - chr2L_6_15950001 chr2L_15950001 RC1_1-HE 440 chr2L 15956025 15956057 chr2L 15957492 15957525 hobo 5 1468 6.0 4.5 5.2 0.8 1500 chr2L 15956025 intron beat-Ib - chr2L 15956775 intron beat-Ib - chr2L 15957525 intron beat-Ib - chr2L_5_15955001 chr2L_15955001 RC1_1-HE 441 chr2L 15971982 15971995 chr2L 15972081 15972094 4 99 0.0 3.0 1.5 1.6 112 chr2L 15971982 intergenic not near genes chr2L 15972038 intergenic not near genes chr2L 15972094 intergenic not near genes chr2L_4_15970001 chr2L_15970001 RC1_1-HE 442 chr2L 16058129 16058152 chr2L 16058271 16058294 9 142 3.0 4.0 3.5 2.0 165 chr2L 16058129 intron beat-Ia + chr2L 16058212 intron beat-Ia + chr2L 16058294 intron beat-Ia + chr2L_9_16055001 chr2L_16055001 RC1_1-HE 443 chr2L 16068349 16068368 chr2L 16068579 16068580 4 226 3.0 3.5 3.2 1.0 231 chr2L 16068349 intron beat-Ia + chr2L 16068464 intron beat-Ia + chr2L 16068580 intron beat-Ia + chr2L_4_16065001 chr2L_16065001 RC1_1-HE 444 chr2L 16098922 16098952 chr2L 16099011 16099044 7 89 3.0 3.5 3.2 1.7 122 chr2L 16098922 intergenic not near genes chr2L 16098983 intergenic not near genes chr2L 16099044 intergenic not near genes chr2L_7_16095001 chr2L_16095001 RC1_1-HE 445 chr2L 16141162 16141191 chr2L 16146370 16146399 copia 9 5208 7.0 3.5 5.2 1.5 5237 chr2L 16141162 intergenic not near genes chr2L 16143780 intergenic not near genes chr2L 16146399 intergenic not near genes chr2L_9_16140001 chr2L_16140001 RC1_1-HE 446 chr2L 16153741 16153759 chr2L 16160810 16160828 297 7 7069 4.5 2.0 3.2 1.7 7087 chr2L 16153741 intergenic not near genes chr2L 16157284 intergenic not near genes chr2L 16160828 intergenic not near genes chr2L_7_16155001 chr2L_16155001 RC1_1-HE 447 chr2L 16166263 16166291 chr2L 16166366 16166394 6 103 1.0 1.5 1.2 2.7 131 chr2L 16166263 5` UTR Ca-alpha1D + chr2L 16166328 5` UTR Ca-alpha1D + chr2L 16166394 5` UTR Ca-alpha1D + chr2L_6_16165001 chr2L_16165001 RC1_1-HE 448 chr2L 16224912 16224965 chr2L 16225054 16225070 6 120 0.5 1.5 1.0 3.0 158 chr2L 16224912 intergenic not near genes chr2L 16224991 intergenic not near genes chr2L 16225070 intergenic not near genes chr2L_6_16225001 chr2L_16225001 RC1_1-HE 449 chr2L 16226183 16226209 chr2L 16226271 16226297 9 86 3.0 3.0 3.0 2.2 114 chr2L 16226183 intergenic not near genes chr2L 16226240 intergenic not near genes chr2L 16226297 intergenic not near genes chr2L_9_16225001 chr2L_16225001 RC1_1-HE 450 chr2L 16242083 16242090 chr2L 16242176 16242183 4 93 3.5 0.5 2.0 1.3 100 chr2L 16242083 exon CG42818 + chr2L 16242133 exon CG42818 + chr2L 16242183 exon CG42818 + chr2L_4_16240001 chr2L_16240001 RC1_1-HE 451 chr2L 16254890 16254913 chr2L 16255150 16255173 10 260 2.5 3.5 3.0 2.5 283 chr2L 16254890 intron PRL-1 - chr2L 16255032 intron PRL-1 - chr2L 16255173 intron PRL-1 - chr2L_10_16255001 chr2L_16255001 RC1_1-HE 452 chr2L 16280258 16280276 chr2L 16281426 16281445 1360 10 1169 4.5 3.0 3.8 2.1 1187 chr2L 16280258 intron crp - chr2L 16280852 intron crp - chr2L 16281445 intron crp - chr2L_10_16280001 chr2L_16280001 RC1_1-HE 453 chr2L 16280279 16280288 chr2L 16281419 16281457 1360 7 1161 2.5 3.0 2.8 1.8 1178 chr2L 16280279 intron crp - chr2L 16280868 intron crp - chr2L 16281457 intron crp - chr2L_7_16280001 chr2L_16280001 RC1_1-HE 454 chr2L 16298725 16298746 chr2L 16298805 16298821 7 79 9.0 2.0 5.5 1.1 96 chr2L 16298725 intron heix - chr2L 16298773 intron heix - chr2L 16298821 intron heix - chr2L_7_16295001 chr2L_16295001 RC1_1-HE 455 chr2L 16363943 16363975 chr2L 16364190 16364222 8 247 5.0 0.5 2.8 2.1 279 chr2L 16363943 intergenic not near genes chr2L 16364082 intergenic not near genes chr2L 16364222 intergenic not near genes chr2L_8_16360001 chr2L_16360001 RC1_1-HE 456 chr2L 16391806 16391832 chr2L 16391883 16391909 12 77 4.0 4.5 4.2 2.3 103 chr2L 16391806 intergenic not near genes chr2L 16391858 intergenic not near genes chr2L 16391909 intergenic not near genes chr2L_12_16390001 chr2L_16390001 RC1_1-HE 457 chr2L 16432589 16432616 chr2L 16432687 16432714 6 98 0.0 4.0 2.0 2.0 125 chr2L 16432589 intron CG5888 - chr2L 16432652 intron CG5888 - chr2L 16432714 intron CG5888 - chr2L_6_16430001 chr2L_16430001 RC1_1-HE 458 chr2L 16504107 16504130 chr2L 16504335 16504364 6 233 3.5 2.5 3.0 1.5 257 chr2L 16504107 intron Tpr2 + chr2L 16504236 intron Tpr2 + chr2L 16504364 intron Tpr2 + chr2L_6_16500001 chr2L_16500001 RC1_1-HE 459 chr2L 16566326 16566335 chr2L 16566403 16566412 5 77 2.5 4.0 3.2 1.2 86 chr2L 16566326 intron CG42389 + chr2L 16566369 intron CG42389 + chr2L 16566412 intron CG42389 + chr2L_5_16565001 chr2L_16565001 RC1_1-HE 460 chr2L 16573243 16573262 chr2L 16573327 16573346 7 83 6.5 6.5 6.5 0.9 103 chr2L 16573243 intron CG42389 + chr2L 16573294 intron CG42389 + chr2L 16573346 intron CG42389 + chr2L_7_16570001 chr2L_16570001 RC1_1-HE 461 chr2L 16670417 16670448 chr2L 16670495 16670526 9 78 2.0 1.5 1.8 3.2 109 chr2L 16670417 intron Trpgamma - chr2L 16670472 intron Trpgamma - chr2L 16670526 intron Trpgamma - chr2L_9_16670001 chr2L_16670001 RC1_1-HE 462 chr2L 16695262 16695291 chr2L 16695347 16695376 12 85 3.5 5.5 4.5 2.2 114 chr2L 16695262 intron grp + chr2L 16695319 intron grp + chr2L 16695376 intron grp + chr2L_12_16695001 chr2L_16695001 RC1_1-HE 463 chr2L 16697069 16697087 chr2L 16697263 16697281 13 194 4.5 0.5 2.5 3.7 212 chr2L 16697069 intron grp + chr2L 16697175 intron grp + chr2L 16697281 intron grp + chr2L_13_16695001 chr2L_16695001 RC1_1-HE 464 chr2L 16709088 16709103 chr2L 16709173 16709188 10 85 1.5 6.0 3.8 2.1 100 chr2L 16709088 intron CG31808 - chr2L 16709138 intron CG31808 - chr2L 16709188 intron CG31808 - chr2L_10_16705001 chr2L_16705001 RC1_1-HE 465 chr2L 16728922 16728957 chr2L 16729558 16729593 8 636 5.5 5.0 5.2 1.3 671 chr2L 16728922 intergenic not near genes chr2L 16729258 intergenic not near genes chr2L 16729593 intergenic CG31812 + chr2L_8_16725001 chr2L_16725001 RC1_1-HE 466 chr2L 16809655 16809659 chr2L 16809784 16809788 4 129 0.0 0.0 0.0 4.0 133 chr2L 16809655 intron,intron CG13280 -,CG13272 + chr2L 16809722 intron,intron CG13280 -,CG13272 + chr2L 16809788 intron,intron CG13280 -,CG13272 + chr2L_4_16805001 chr2L_16805001 RC1_1-HE 467 chr2L 16841010 16841039 chr2L 16841087 16841116 10 77 3.5 1.0 2.2 3.1 106 chr2L 16841010 intron,intron SclA +,SclB + chr2L 16841063 intron,intron SclA +,SclB + chr2L 16841116 intron,intron SclA +,SclB + chr2L_10_16840001 chr2L_16840001 RC1_1-HE 468 chr2L 16852433 16852454 chr2L 16852512 16852533 4 79 2.0 2.0 2.0 1.3 100 chr2L 16852433 intergenic CG31810 - chr2L 16852483 intergenic CG31810 - chr2L 16852533 intergenic CG31810 - chr2L_4_16850001 chr2L_16850001 RC1_1-HE 469 chr2L 16852791 16852805 chr2L 16859927 16859948 Doc4-element 4 7141 9.5 3.0 6.2 0.6 7157 chr2L 16852791 intergenic CG31810 - chr2L 16856370 intron CG31809 - chr2L 16859948 intergenic CG6012 - chr2L_4_16855001 chr2L_16855001 RC1_1-HE 470 chr2L 16927954 16927985 chr2L 16928061 16928089 13 107 7.0 3.5 5.2 2.1 135 chr2L 16927954 intergenic not near genes chr2L 16928022 intergenic not near genes chr2L 16928089 intergenic not near genes chr2L_13_16925001 chr2L_16925001 RC1_1-HE 471 chr2L 16939999 16940015 chr2L 16940078 16940094 7 79 4.0 5.0 4.5 1.3 95 chr2L 16939999 intergenic not near genes chr2L 16940046 intergenic not near genes chr2L 16940094 intergenic not near genes chr2L_7_16940001 chr2L_16940001 RC1_1-HE 472 chr2L 16958104 16958136 chr2L 16962893 16962925 Doc 22 4789 4.0 4.0 4.0 4.4 4821 chr2L 16958104 intergenic not near genes chr2L 16960514 intergenic not near genes chr2L 16962925 intergenic not near genes chr2L_22_16960001 chr2L_16960001 RC1_1-HE 473 chr2L 16968231 16968266 chr2L 16968322 16968357 17 91 4.0 6.0 5.0 2.8 126 chr2L 16968231 intergenic not near genes chr2L 16968294 intergenic not near genes chr2L 16968357 intergenic not near genes chr2L_17_16965001 chr2L_16965001 RC1_1-HE 474 chr2L 16971781 16971812 chr2L 16971858 16971889 5 77 2.5 3.0 2.8 1.3 108 chr2L 16971781 intergenic not near genes chr2L 16971835 intergenic not near genes chr2L 16971889 intergenic not near genes chr2L_5_16970001 chr2L_16970001 RC1_1-HE 475 chr2L 16987431 16987454 chr2L 16987512 16987535 9 80 4.5 8.5 6.5 1.2 104 chr2L 16987431 intron beat-IIIb + chr2L 16987483 intron beat-IIIb + chr2L 16987535 intron beat-IIIb + chr2L_9_16985001 chr2L_16985001 RC1_1-HE 476 chr2L 17000117 17000150 chr2L 17000240 17000267 16 123 4.0 4.5 4.2 3.1 150 chr2L 17000117 intergenic not near genes chr2L 17000192 intergenic not near genes chr2L 17000267 intergenic not near genes chr2L_16_17000001 chr2L_17000001 RC1_1-HE 477 chr2L 9044167 9044168 chr2L 17014128 17014129 4 7969961 17.0 6.5 11.8 0.3 7969962 chr2L 9044167 intergenic not near genes chr2L 13029148 exon CG9932 - chr2L 17014129 intron CG6304 - chr2L_4_13025001 chr2L_13025001 RC1_1-HE 478 chr2L 17018305 17018335 chr2L 17018395 17018425 15 90 4.5 5.5 5.0 2.5 120 chr2L 17018305 intergenic CR45462 - chr2L 17018365 intergenic CR45462 - chr2L 17018425 intergenic CR45462 - chr2L_15_17015001 chr2L_17015001 RC1_1-HE 479 chr2L 17033915 17033950 chr2L 17034001 17034036 14 86 4.5 5.0 4.8 2.4 121 chr2L 17033915 intergenic not near genes chr2L 17033976 intergenic not near genes chr2L 17034036 intergenic not near genes chr2L_14_17030001 chr2L_17030001 RC1_1-HE 480 chr2L 17070202 17070219 chr2L 17070299 17070316 10 97 2.5 5.0 3.8 2.1 114 chr2L 17070202 intergenic not near genes chr2L 17070259 intergenic not near genes chr2L 17070316 intergenic not near genes chr2L_10_17070001 chr2L_17070001 RC1_1-HE 481 chr2L 17087376 17087405 chr2L 17087495 17087524 12 118 3.5 5.0 4.2 2.3 148 chr2L 17087376 intergenic CG12620 + chr2L 17087450 intergenic CG12620 + chr2L 17087524 intergenic CG12620 + chr2L_12_17085001 chr2L_17085001 RC1_1-HE 482 chr2L 17101900 17101910 chr2L 17101978 17101988 5 78 10.5 3.0 6.8 0.6 88 chr2L 17101900 intergenic not near genes chr2L 17101944 intergenic not near genes chr2L 17101988 intergenic not near genes chr2L_5_17100001 chr2L_17100001 RC1_1-HE 483 chr2L 17110929 17110959 chr2L 17111012 17111042 8 83 4.0 2.0 3.0 2.0 113 chr2L 17110929 intergenic not near genes chr2L 17110986 intergenic not near genes chr2L 17111042 intergenic not near genes chr2L_8_17110001 chr2L_17110001 RC1_1-HE 484 chr2L 17142640 17142646 chr2L 17142734 17142740 6 94 6.5 6.0 6.2 0.8 100 chr2L 17142640 intron,intron CG34106 +,beat-IIIa + chr2L 17142690 intron,intron CG34106 +,beat-IIIa + chr2L 17142740 intron,intron CG34106 +,beat-IIIa + chr2L_6_17140001 chr2L_17140001 RC1_1-HE 485 chr2L 17158733 17158764 chr2L 17158836 17158867 11 103 4.5 4.5 4.5 2.0 134 chr2L 17158733 5` UTR,exon CG34106 +,beat-IIIa + chr2L 17158800 intron,intron CG34106 +,beat-IIIa + chr2L 17158867 intron,intron CG34106 +,beat-IIIa + chr2L_11_17155001 chr2L_17155001 RC1_1-HE 486 chr2L 17164552 17164588 chr2L 17164636 17164672 17 83 2.0 3.0 2.5 4.9 120 chr2L 17164552 intron,intron CG34106 +,beat-IIIa + chr2L 17164612 intron,intron CG34106 +,beat-IIIa + chr2L 17164672 intron,intron CG34106 +,beat-IIIa + chr2L_17_17160001 chr2L_17160001 RC1_1-HE 487 chr2L 17167567 17167595 chr2L 17167809 17167837 pogo 11 242 2.5 4.5 3.5 2.4 270 chr2L 17167567 intron,intron CG34106 +,beat-IIIa + chr2L 17167702 intron,intron CG34106 +,beat-IIIa + chr2L 17167837 intron,intron CG34106 +,beat-IIIa + chr2L_11_17165001 chr2L_17165001 RC1_1-HE 488 chr2L 17199160 17199189 chr2L 17200628 17200657 hobo 9 1468 5.0 1.5 3.2 2.1 1497 chr2L 17199160 intron beat-IIIc - chr2L 17199908 intron beat-IIIc - chr2L 17200657 intron beat-IIIc - chr2L_9_17195001 chr2L_17195001 RC1_1-HE 489 chr2L 17233621 17233649 chr2L 17234217 17234246 13 596 3.5 2.0 2.8 3.4 625 chr2L 17233621 intron beat-IIIc - chr2L 17233934 intron beat-IIIc - chr2L 17234246 intron beat-IIIc - chr2L_13_17230001 chr2L_17230001 RC1_1-HE 490 chr2L 17261217 17261246 chr2L 17261309 17261338 5 92 0.0 8.0 4.0 1.0 121 chr2L 17261217 intergenic beat-IIIc - chr2L 17261278 intergenic not near genes chr2L 17261338 intergenic not near genes chr2L_5_17260001 chr2L_17260001 RC1_1-HE 491 chr2L 17273195 17273226 chr2L 17277979 17278010 F-element 14 4784 2.5 3.0 2.8 3.7 4815 chr2L 17273195 intergenic not near genes chr2L 17275602 intergenic not near genes chr2L 17278010 intergenic not near genes chr2L_14_17275001 chr2L_17275001 RC1_1-HE 492 chr2L 17287053 17287073 chr2L 17287164 17287184 20 110 8.5 10.5 9.5 1.9 131 chr2L 17287053 exon CG15140 + chr2L 17287118 exon CG15140 + chr2L 17287184 exon CG15140 + chr2L_20_17285001 chr2L_17285001 RC1_1-HE 493 chr2L 17292371 17292384 chr2L 17292452 17292465 8 81 7.0 4.0 5.5 1.2 94 chr2L 17292371 intergenic CG6380 - chr2L 17292418 intergenic CG6380 - chr2L 17292465 intergenic CG6380 - chr2L_8_17290001 chr2L_17290001 RC1_1-HE 494 chr2L 17301615 17301641 chr2L 17301693 17301708 18 77 7.5 1.5 4.5 3.3 93 chr2L 17301615 intergenic not near genes chr2L 17301662 intergenic not near genes chr2L 17301708 intergenic not near genes chr2L_18_17300001 chr2L_17300001 RC1_1-HE 495 chr2L 17310370 17310399 chr2L 17310465 17310494 4 95 1.0 1.0 1.0 2.0 124 chr2L 17310370 intergenic not near genes chr2L 17310432 intergenic not near genes chr2L 17310494 intergenic not near genes chr2L_4_17310001 chr2L_17310001 RC1_1-HE 496 chr2L 17339130 17339160 chr2L 17339208 17339238 9 78 4.0 3.5 3.8 1.9 108 chr2L 17339130 intergenic not near genes chr2L 17339184 intergenic not near genes chr2L 17339238 intergenic not near genes chr2L_9_17335001 chr2L_17335001 RC1_1-HE 497 chr2L 17355891 17355913 chr2L 17356322 17356343 9 430 3.0 0.0 1.5 3.6 452 chr2L 17355891 intergenic CR44345 + chr2L 17356117 intergenic not near genes chr2L 17356343 intergenic not near genes chr2L_9_17355001 chr2L_17355001 RC1_1-HE 498 chr2L 17432018 17432048 chr2L 17432126 17432156 1360 13 108 0.0 1.0 0.5 8.7 138 chr2L 17432018 intron Dif - chr2L 17432087 intron Dif - chr2L 17432156 intron Dif - chr2L_13_17430001 chr2L_17430001 RC1_1-HE 499 chr2L 17466421 17466456 chr2L 17466515 17466539 11 93 0.0 2.5 1.2 5.0 118 chr2L 17466421 intron BicD - chr2L 17466480 intron BicD - chr2L 17466539 intron BicD - chr2L_11_17465001 chr2L_17465001 RC1_1-HE 500 chr2L 17517855 17517880 chr2L 17517939 17517964 10 84 5.5 6.0 5.8 1.5 109 chr2L 17517855 intron Dhc36C + chr2L 17517910 intron Dhc36C + chr2L 17517964 intron Dhc36C + chr2L_10_17515001 chr2L_17515001 RC1_1-HE 501 chr2L 17541121 17541141 chr2L 17541201 17541221 5 80 3.5 5.0 4.2 1.0 100 chr2L 17541121 intergenic not near genes chr2L 17541171 intergenic not near genes chr2L 17541221 intergenic not near genes chr2L_5_17540001 chr2L_17540001 RC1_1-HE 502 chr2L 17565385 17565409 chr2L 17565477 17565501 8 92 0.5 0.0 0.2 6.7 116 chr2L 17565385 intergenic not near genes chr2L 17565443 intergenic not near genes chr2L 17565501 intergenic not near genes chr2L_8_17565001 chr2L_17565001 RC1_1-HE 503 chr2L 17595469 17595480 chr2L 17595582 17595593 5 113 3.0 4.0 3.5 1.1 124 chr2L 17595469 intron Sytalpha + chr2L 17595531 intron Sytalpha + chr2L 17595593 intron Sytalpha + chr2L_5_17595001 chr2L_17595001 RC1_1-HE 504 chr2L 17687515 17687521 chr2L 17692261 17692267 F-element 5 4746 5.5 5.5 5.5 0.8 4752 chr2L 17687515 intron CadN - chr2L 17689891 intron CadN - chr2L 17692267 intron CadN - chr2L_5_17685001 chr2L_17685001 RC1_1-HE 505 chr2L 17707693 17707717 chr2L 17707843 17707867 4 150 1.0 2.0 1.5 1.6 174 chr2L 17707693 intron CadN - chr2L 17707780 intron CadN - chr2L 17707867 intron CadN - chr2L_4_17705001 chr2L_17705001 RC1_1-HE 506 chr2L 17723787 17723802 chr2L 17723881 17723896 7 94 3.5 4.0 3.8 1.5 109 chr2L 17723787 intron CadN - chr2L 17723842 intron CadN - chr2L 17723896 intron CadN - chr2L_7_17720001 chr2L_17720001 RC1_1-HE 507 chr2L 17727867 17727882 chr2L 17729335 17729342 hobo 7 1467 2.5 13.5 8.0 0.8 1475 chr2L 17727867 intron CadN - chr2L 17728604 intron CadN - chr2L 17729342 intron CadN - chr2L_7_17725001 chr2L_17725001 RC1_1-HE 508 chr2L 17786898 17786913 chr2L 17787181 17787196 8 282 5.5 4.5 5.0 1.3 298 chr2L 17786898 intergenic CadN2 - chr2L 17787047 3` UTR CadN2 - chr2L 17787196 3` UTR CadN2 - chr2L_8_17785001 chr2L_17785001 RC1_1-HE 509 chr2L 17786914 17786926 chr2L 17787180 17787209 9 280 4.0 4.5 4.2 1.7 295 chr2L 17786914 intergenic CadN2 - chr2L 17787062 3` UTR CadN2 - chr2L 17787209 3` UTR CadN2 - chr2L_9_17785001 chr2L_17785001 RC1_1-HE 510 chr2L 17819921 17819943 chr2L 17825126 17825147 copia 9 5205 5.0 3.0 4.0 1.8 5226 chr2L 17819921 intron CadN2 - chr2L 17822534 intron CadN2 - chr2L 17825147 intron CadN2 - chr2L_9_17820001 chr2L_17820001 RC1_1-HE 511 chr2L 17863749 17863758 chr2L 17863840 17863849 5 91 4.5 5.0 4.8 0.9 100 chr2L 17863749 intron CadN2 - chr2L 17863799 intron CadN2 - chr2L 17863849 intron CadN2 - chr2L_5_17860001 chr2L_17860001 RC1_1-HE 512 chr2L 17878515 17878539 chr2L 17878620 17878644 7 105 7.0 7.0 7.0 0.9 129 chr2L 17878515 intergenic not near genes chr2L 17878580 intergenic not near genes chr2L 17878644 intergenic not near genes chr2L_7_17875001 chr2L_17875001 RC1_1-HE 513 chr2L 17879997 17880024 chr2L 17880085 17880112 12 86 2.5 2.0 2.2 3.8 115 chr2L 17879997 intergenic not near genes chr2L 17880054 intergenic not near genes chr2L 17880112 intergenic not near genes chr2L_12_17880001 chr2L_17880001 RC1_1-HE 514 chr2L 17897218 17897252 chr2L 17897299 17897334 17 82 5.5 4.0 4.8 2.9 116 chr2L 17897218 intergenic not near genes chr2L 17897276 intergenic not near genes chr2L 17897334 intergenic not near genes chr2L_17_17895001 chr2L_17895001 RC1_1-HE 515 chr2L 17911956 17911988 chr2L 17914135 17914167 pogo 10 2175 2.0 9.0 5.5 1.5 2211 chr2L 17911956 intergenic not near genes chr2L 17913062 intergenic not near genes chr2L 17914167 intergenic CG43271 - chr2L_10_17910001 chr2L_17910001 RC1_1-HE 516 chr2L 17938697 17938721 chr2L 17938784 17938802 10 84 3.0 0.5 1.8 3.6 105 chr2L 17938697 intergenic CR44399 - chr2L 17938750 intergenic CR44399 - chr2L 17938802 intergenic CR44399 - chr2L_10_17935001 chr2L_17935001 RC1_1-HE 517 chr2L 17941853 17941870 chr2L 17941937 17941955 6 85 4.5 5.0 4.8 1.0 102 chr2L 17941853 intergenic not near genes chr2L 17941904 intergenic not near genes chr2L 17941955 intergenic not near genes chr2L_6_17940001 chr2L_17940001 RC1_1-HE 518 chr2L 17943196 17943226 chr2L 17943277 17943308 11 81 3.0 5.0 4.0 2.2 112 chr2L 17943196 intergenic not near genes chr2L 17943252 intergenic not near genes chr2L 17943308 intergenic not near genes chr2L_11_17940001 chr2L_17940001 RC1_1-HE 519 chr2L 17951950 17951976 chr2L 17953418 17953444 hobo 10 1468 6.0 4.5 5.2 1.6 1494 chr2L 17951950 intergenic CR44398 -,CR44397 - chr2L 17952697 intergenic not near genes chr2L 17953444 intergenic not near genes chr2L_10_17950001 chr2L_17950001 RC1_1-HE 520 chr2L 18051874 18051899 chr2L 18061022 18061047 roo 16 9147 4.0 3.0 3.5 3.6 9173 chr2L 18051874 intron rdo + chr2L 18056460 intron rdo + chr2L 18061047 intron rdo + chr2L_16_18055001 chr2L_18055001 RC1_1-HE 521 chr2L 18079814 18079847 chr2L 18079901 18079934 7 87 2.0 1.5 1.8 2.5 120 chr2L 18079814 intron Arr1 + chr2L 18079874 intron Arr1 + chr2L 18079934 intron Arr1 + chr2L_7_18075001 chr2L_18075001 RC1_1-HE 522 chr2L 18111241 18111257 chr2L 18111333 18111349 8 92 4.0 4.5 4.2 1.5 108 chr2L 18111241 intergenic not near genes chr2L 18111295 intergenic not near genes chr2L 18111349 intergenic not near genes chr2L_8_18110001 chr2L_18110001 RC1_1-HE 523 chr2L 18141573 18141600 chr2L 18141673 18141700 6 100 4.0 4.0 4.0 1.2 127 chr2L 18141573 intron Socs36E - chr2L 18141636 intron Socs36E - chr2L 18141700 intron Socs36E - chr2L_6_18140001 chr2L_18140001 RC1_1-HE 524 chr2L 18236222 18236254 chr2L 18236300 18236332 8 78 4.5 3.0 3.8 1.7 110 chr2L 18236222 intron CG42750 - chr2L 18236277 intron CG42750 - chr2L 18236332 intron CG42750 - chr2L_8_18235001 chr2L_18235001 RC1_1-HE 525 chr2L 18248452 18248484 chr2L 18248531 18248542 17 78 3.5 5.5 4.5 3.1 90 chr2L 18248452 intron CG42750 - chr2L 18248497 intron CG42750 - chr2L 18248542 intron CG42750 - chr2L_17_18245001 chr2L_18245001 RC1_1-HE 526 chr2L 18264140 18264174 chr2L 18264229 18264263 12 89 1.5 1.0 1.2 5.5 123 chr2L 18264140 intron CG42750 - chr2L 18264202 intron CG42750 - chr2L 18264263 intron CG42750 - chr2L_12_18260001 chr2L_18260001 RC1_1-HE 527 chr2L 18291529 18291550 chr2L 18291628 18291649 9 99 3.5 0.0 1.8 3.2 120 chr2L 18291529 intergenic CG43362 -,CR44693 +,CR44696 - chr2L 18291589 intergenic CR44693 +,CG43362 -,CR44696 - chr2L 18291649 intergenic CR44693 +,CG43362 -,CR44696 - chr2L_9_18290001 chr2L_18290001 RC1_1-HE 528 chr2L 18291552 18291560 chr2L 18291625 18291659 5 94 2.0 0.0 1.0 2.5 107 chr2L 18291552 intergenic CG43362 -,CR44693 +,CR44696 - chr2L 18291606 intergenic CR44693 +,CG43362 -,CR44696 - chr2L 18291659 intergenic CR44693 +,CG43362 -,CR44696 - chr2L_5_18290001 chr2L_18290001 RC1_1-HE 529 chr2L 18294226 18294245 chr2L 18294306 18294325 6 80 4.5 2.5 3.5 1.3 99 chr2L 18294226 intergenic CR43358 - chr2L 18294276 intergenic CR43358 - chr2L 18294325 intergenic CR43358 - chr2L_6_18290001 chr2L_18290001 RC1_1-HE 530 chr2L 18303971 18304003 chr2L 18304063 18304095 15 92 2.5 2.0 2.2 4.7 124 chr2L 18303971 intergenic not near genes chr2L 18304033 intergenic not near genes chr2L 18304095 intergenic not near genes chr2L_15_18300001 chr2L_18300001 RC1_1-HE 531 chr2L 18349562 18349568 chr2L 18349639 18349645 7 77 0.0 8.5 4.2 1.3 83 chr2L 18349562 intron Fas3 + chr2L 18349604 intron Fas3 + chr2L 18349645 intron Fas3 + chr2L_7_18345001 chr2L_18345001 RC1_1-HE 532 chr2L 18350573 18350599 chr2L 18350663 18350689 13 90 5.5 5.0 5.2 2.1 116 chr2L 18350573 intron Fas3 + chr2L 18350631 intron Fas3 + chr2L 18350689 intron Fas3 + chr2L_13_18350001 chr2L_18350001 RC1_1-HE 533 chr2L 18373289 18373307 chr2L 18373366 18373374 8 76 7.0 0.5 3.8 1.7 85 chr2L 18373289 intron Fas3 + chr2L 18373332 intron Fas3 + chr2L 18373374 intron Fas3 + chr2L_8_18370001 chr2L_18370001 RC1_1-HE 534 chr2L 18408026 18408049 chr2L 18412811 18412834 Doc 10 4785 5.0 0.0 2.5 2.9 4808 chr2L 18408026 intergenic not near genes chr2L 18410430 intergenic not near genes chr2L 18412834 intergenic not near genes chr2L_10_18410001 chr2L_18410001 RC1_1-HE 535 chr2L 18464407 18464441 chr2L 18464492 18464526 12 85 4.0 2.5 3.2 2.9 119 chr2L 18464407 intron let-7-C + chr2L 18464466 intron let-7-C + chr2L 18464526 intron let-7-C + chr2L_12_18460001 chr2L_18460001 RC1_1-HE 536 chr2L 18472844 18472880 chr2L 18472934 18472970 6 90 0.0 1.5 0.8 3.3 126 chr2L 18472844 5` UTR let-7-C + chr2L 18472907 5` UTR let-7-C + chr2L 18472970 5` UTR,3` UTR let-7-C +,CG10283 - chr2L_6_18470001 chr2L_18470001 RC1_1-HE 537 chr2L 18499696 18499728 chr2L 18499775 18499807 10 78 3.5 6.0 4.8 1.7 111 chr2L 18499696 intron kon - chr2L 18499752 intron kon - chr2L 18499807 intron kon - chr2L_10_18495001 chr2L_18495001 RC1_1-HE 538 chr2L 18508755 18508784 chr2L 18508962 18508991 7 205 2.5 2.5 2.5 2.0 236 chr2L 18508755 intergenic not near genes chr2L 18508873 intergenic not near genes chr2L 18508991 intergenic not near genes chr2L_7_18505001 chr2L_18505001 RC1_1-HE 539 chr2L 18551938 18551963 chr2L 18552222 18552247 23 284 6.5 4.5 5.5 3.5 309 chr2L 18551938 intron Pde11 - chr2L 18552092 intron Pde11 - chr2L 18552247 intron Pde11 - chr2L_23_18550001 chr2L_18550001 RC1_1-HE 540 chr2L 18555955 18555979 chr2L 18556135 18556159 11 180 5.0 7.5 6.2 1.5 204 chr2L 18555955 intron Pde11 - chr2L 18556057 intron Pde11 - chr2L 18556159 intron Pde11 - chr2L_11_18555001 chr2L_18555001 RC1_1-HE 541 chr2L 18630795 18630828 chr2L 18630877 18630910 15 81 5.0 6.5 5.8 2.2 115 chr2L 18630795 intron MESR3 + chr2L 18630852 intron MESR3 + chr2L 18630910 intron MESR3 + chr2L_15_18630001 chr2L_18630001 RC1_1-HE 542 chr2L 18648338 18648370 chr2L 18648421 18648453 17 82 4.5 6.5 5.5 2.6 115 chr2L 18648338 intron MESR3 + chr2L 18648396 intron MESR3 + chr2L 18648453 intron MESR3 + chr2L_17_18645001 chr2L_18645001 RC1_1-HE 543 chr2L 18721279 18721291 chr2L 18721365 18721378 5 85 12.0 9.5 10.8 0.4 99 chr2L 18721279 intron CG10348 - chr2L 18721328 intron CG10348 - chr2L 18721378 intron CG10348 - chr2L_5_18720001 chr2L_18720001 RC1_1-HE 544 chr2L 18876862 18876883 chr2L 18876941 18876962 17 79 4.0 3.0 3.5 3.8 100 chr2L 18876862 intron tup - chr2L 18876912 intron tup - chr2L 18876962 intron tup - chr2L_17_18875001 chr2L_18875001 RC1_1-HE 545 chr2L 18878080 18878112 chr2L 18878161 18878191 4 80 4.5 0.0 2.2 1.2 111 chr2L 18878080 intron tup - chr2L 18878136 intron tup - chr2L 18878191 intron tup - chr2L_4_18875001 chr2L_18875001 RC1_1-HE 546 chr2L 18902558 18902629 chr2L 18902661 18902911 6 133 3.0 6.5 4.8 1.0 353 chr2L 18902558 intergenic not near genes chr2L 18902734 intergenic not near genes chr2L 18902911 intergenic not near genes chr2L_6_18900001 chr2L_18900001 RC1_1-HE 547 chr2L 18981759 18981774 chr2L 18981837 18981852 8 78 3.5 8.0 5.8 1.2 93 chr2L 18981759 intron Swip-1 - chr2L 18981806 intron Swip-1 - chr2L 18981852 intron Swip-1 - chr2L_8_18980001 chr2L_18980001 RC1_1-HE 548 chr2L 19016240 19016275 chr2L 19016337 19016372 17 97 4.0 2.5 3.2 4.0 132 chr2L 19016240 intergenic not near genes chr2L 19016306 intergenic not near genes chr2L 19016372 intergenic not near genes chr2L_17_19015001 chr2L_19015001 RC1_1-HE 549 chr2L 19048718 19048737 chr2L 19048813 19048833 6 96 2.5 1.0 1.8 2.1 115 chr2L 19048718 3` UTR Acn + chr2L 19048776 3` UTR Acn + chr2L 19048833 intergenic Acn +,CG10470 + chr2L_6_19045001 chr2L_19045001 RC1_1-HE 550 chr2L 19069169 19069193 chr2L 19069266 19069291 6 98 2.0 2.0 2.0 2.0 122 chr2L 19069169 5` UTR,intron CG10702 -,CG17343 + chr2L 19069230 intron,intron CG10702 -,CG17343 + chr2L 19069291 intron,intron CG10702 -,CG17343 + chr2L_6_19065001 chr2L_19065001 RC1_1-HE 551 chr2L 19147378 19147403 chr2L 19154414 19154439 297 11 7035 4.0 11.5 7.8 1.2 7061 chr2L 19147378 intron brat + chr2L 19150908 intron brat + chr2L 19154439 intron brat + chr2L_11_19150001 chr2L_19150001 RC1_1-HE 552 chr2L 19189966 19190004 chr2L 19190121 19190158 10 154 2.5 2.5 2.5 2.9 192 chr2L 19189966 intergenic pigeon +,drl + chr2L 19190062 intergenic pigeon +,drl + chr2L 19190158 intergenic drl +,pigeon + chr2L_10_19190001 chr2L_19190001 RC1_1-HE 553 chr2L 19209616 19209649 chr2L 19209702 19209735 9 86 4.5 2.0 3.2 2.1 119 chr2L 19209616 intergenic not near genes chr2L 19209676 intergenic not near genes chr2L 19209735 intergenic not near genes chr2L_9_19205001 chr2L_19205001 RC1_1-HE 554 chr2L 19226904 19226935 chr2L 19226991 19227022 12 87 3.0 4.5 3.8 2.5 118 chr2L 19226904 intergenic not near genes chr2L 19226963 intergenic not near genes chr2L 19227022 intergenic not near genes chr2L_12_19225001 chr2L_19225001 RC1_1-HE 555 chr2L 19241059 19241088 chr2L 19241139 19241167 7 79 7.0 8.0 7.5 0.8 108 chr2L 19241059 intergenic not near genes chr2L 19241113 intergenic not near genes chr2L 19241167 intergenic not near genes chr2L_7_19240001 chr2L_19240001 RC1_1-HE 556 chr2L 19321431 19321461 chr2L 19321536 19321566 13 105 2.5 4.5 3.5 2.9 135 chr2L 19321431 intergenic not near genes chr2L 19321498 intergenic not near genes chr2L 19321566 intergenic not near genes chr2L_13_19320001 chr2L_19320001 RC1_1-HE 557 chr2L 19345024 19345050 chr2L 19357222 19357260 blood 15 12208 3.5 5.0 4.2 2.9 12236 chr2L 19345024 intron dnt - chr2L 19351142 intron dnt - chr2L 19357260 intron dnt - chr2L_15_19350001 chr2L_19350001 RC1_1-HE 558 chr2L 19357545 19357565 chr2L 19357636 19357656 9 91 6.0 6.0 6.0 1.3 111 chr2L 19357545 intron dnt - chr2L 19357600 intron dnt - chr2L 19357656 intron dnt - chr2L_9_19355001 chr2L_19355001 RC1_1-HE 559 chr2L 19380506 19380529 chr2L 19380587 19380610 7 81 4.0 0.0 2.0 2.3 104 chr2L 19380506 intergenic CG17350 + chr2L 19380558 intergenic CG17350 + chr2L 19380610 intergenic CG17350 + chr2L_7_19380001 chr2L_19380001 RC1_1-HE 560 chr2L 19405622 19405639 chr2L 19405713 19405730 4 91 0.5 3.5 2.0 1.3 108 chr2L 19405622 intron Pax - chr2L 19405676 intron Pax - chr2L 19405730 intron Pax - chr2L_4_19405001 chr2L_19405001 RC1_1-HE 561 chr2L 19432569 19432601 chr2L 19432662 19432694 11 92 5.5 2.0 3.8 2.3 125 chr2L 19432569 intergenic Rab9 +,CG9987 + chr2L 19432632 5` UTR Rab9 + chr2L 19432694 5` UTR Rab9 + chr2L_11_19430001 chr2L_19430001 RC1_1-HE 562 chr2L 19466827 19466862 chr2L 19466907 19466935 11 78 2.5 3.5 3.0 2.8 108 chr2L 19466827 3` UTR tj + chr2L 19466881 3` UTR tj + chr2L 19466935 3` UTR tj + chr2L_11_19465001 chr2L_19465001 RC1_1-HE 563 chr2L 19484832 19484858 chr2L 19487197 19487223 7 2365 14.0 11.5 12.8 0.5 2391 chr2L 19484832 intergenic CG13084 +,CG10195 - chr2L 19486028 exon CG13084 + chr2L 19487223 intergenic CG13083 + chr2L_7_19485001 chr2L_19485001 RC1_1-HE 564 chr2L 19484778 19484798 chr2L 19487220 19487240 4 2442 17.5 14.5 16.0 0.2 2462 chr2L 19484778 intergenic CG10195 -,CG13084 + chr2L 19486009 exon CG13084 + chr2L 19487240 intergenic CG13083 + chr2L_4_19485001 chr2L_19485001 RC1_1-HE 565 chr2L 19558518 19558543 chr2L 19558623 19558648 8 105 1.0 3.0 2.0 2.7 130 chr2L 19558518 intron Tep5 + chr2L 19558583 intron Tep5 + chr2L 19558648 intron Tep5 + chr2L_8_19555001 chr2L_19555001 RC1_1-HE 566 chr2L 19560024 19560039 chr2L 19560277 19560292 9 252 1.5 5.5 3.5 2.0 268 chr2L 19560024 exon Tep5 + chr2L 19560158 exon Tep5 + chr2L 19560292 intron Tep5 + chr2L_9_19560001 chr2L_19560001 RC1_1-HE 567 chr2L 19561341 19561362 chr2L 19561483 19561504 6 142 3.0 4.0 3.5 1.3 163 chr2L 19561341 exon Tep5 + chr2L 19561422 exon Tep5 + chr2L 19561504 exon Tep5 + chr2L_6_19560001 chr2L_19560001 RC1_1-HE 568 chr2L 19601573 19601598 chr2L 19601651 19601676 11 77 2.0 5.5 3.8 2.3 103 chr2L 19601573 intron,intron Lar +,CR44978 - chr2L 19601624 intron,intron Lar +,CR44978 - chr2L 19601676 intron,intron Lar +,CR44978 - chr2L_11_19600001 chr2L_19600001 RC1_1-HE 569 chr2L 19620092 19620132 chr2L 19621082 19621122 jockey 26 989 6.5 5.0 5.8 3.8 1030 chr2L 19620092 intron Lar + chr2L 19620607 intron Lar + chr2L 19621122 intron Lar + chr2L_26_19620001 chr2L_19620001 RC1_1-HE 570 chr2L 19652567 19652604 chr2L 19674004 19674041 opus 21 21437 4.5 6.0 5.2 3.4 21474 chr2L 19652567 intron Lar + chr2L 19663304 intron Lar + chr2L 19674041 intron Lar + chr2L_21_19660001 chr2L_19660001 RC1_1-HE 571 chr2L 19703537 19703570 chr2L 19712674 19712706 roo 26 9137 11.5 5.0 8.2 2.8 9169 chr2L 19703537 intron Lar + chr2L 19708122 intron Lar + chr2L 19712706 intron Lar + chr2L_26_19705001 chr2L_19705001 RC1_1-HE 572 chr2L 19737354 19737389 chr2L 19740821 19740859 1360 13 3470 3.0 1.5 2.2 4.1 3505 chr2L 19737354 intergenic Nf-YB + chr2L 19739106 intergenic not near genes chr2L 19740859 intergenic not near genes chr2L_13_19735001 chr2L_19735001 RC1_1-HE 573 chr2L 19762809 19762840 chr2L 19763052 19763083 pogo 6 243 2.0 4.0 3.0 1.5 274 chr2L 19762809 5` UTR fbp - chr2L 19762946 intron fbp - chr2L 19763083 intron fbp - chr2L_6_19760001 chr2L_19760001 RC1_1-HE 574 chr2L 19814953 19814980 chr2L 19815031 19815140 4 119 1.5 0.0 0.8 2.2 187 chr2L 19814953 intron sick + chr2L 19815046 intron sick + chr2L 19815140 intron sick + chr2L_4_19815001 chr2L_19815001 RC1_1-HE 575 chr2L 19839545 19839574 chr2L 19839622 19839651 8 77 2.5 5.0 3.8 1.7 106 chr2L 19839545 intron sick + chr2L 19839598 intron sick + chr2L 19839651 intron sick + chr2L_8_19835001 chr2L_19835001 RC1_1-HE 576 chr2L 19859000 19859035 chr2L 19859117 19859152 9 116 0.0 2.5 1.2 4.1 152 chr2L 19859000 intron sick + chr2L 19859076 intron sick + chr2L 19859152 intron sick + chr2L_9_19855001 chr2L_19855001 RC1_1-HE 577 chr2L 19947708 19947732 chr2L 19947795 19947819 11 87 6.0 5.0 5.5 1.7 111 chr2L 19947708 intron sick + chr2L 19947764 intron sick + chr2L 19947819 intron sick + chr2L_11_19945001 chr2L_19945001 RC1_1-HE 578 chr2L 19994659 19994684 chr2L 19994740 19994763 6 81 2.5 2.5 2.5 1.7 104 chr2L 19994659 intron CG43861 - chr2L 19994711 intron CG43861 - chr2L 19994763 intron CG43861 - chr2L_6_19990001 chr2L_19990001 RC1_1-HE 579 chr2L 20005872 20005905 chr2L 20010949 20010982 flea 14 5077 3.5 6.5 5.0 2.3 5110 chr2L 20005872 intron CG43861 - chr2L 20008427 intron CG43861 - chr2L 20010982 intron CG43861 - chr2L_14_20005001 chr2L_20005001 RC1_1-HE 580 chr2L 20049300 20049320 chr2L 20049482 20049502 10 182 0.0 0.5 0.2 8.3 202 chr2L 20049300 intron sNPF + chr2L 20049401 intron sNPF + chr2L 20049502 intron sNPF + chr2L_10_20045001 chr2L_20045001 RC1_1-HE 581 chr2L 20079872 20079900 chr2L 20079996 20080024 12 123 4.5 1.0 2.8 3.2 152 chr2L 20079872 intron,intron neb +,fok - chr2L 20079948 intron,intron neb +,fok - chr2L 20080024 intron,intron neb +,fok - chr2L_12_20075001 chr2L_20075001 RC1_1-HE 582 chr2L 20236507 20236540 chr2L 20236584 20236617 9 77 2.0 2.5 2.2 2.8 110 chr2L 20236507 intergenic not near genes chr2L 20236562 intergenic not near genes chr2L 20236617 intergenic not near genes chr2L_9_20235001 chr2L_20235001 RC1_1-HE 583 chr2L 20253013 20253049 chr2L 20253123 20253159 13 108 0.5 1.5 1.0 6.5 146 chr2L 20253013 intergenic not near genes chr2L 20253086 intergenic not near genes chr2L 20253159 intergenic not near genes chr2L_13_20250001 chr2L_20250001 RC1_1-HE 584 chr2L 20272110 20272145 chr2L 20282822 20282857 copia 11 10712 3.0 3.5 3.2 2.6 10747 chr2L 20272110 intergenic not near genes chr2L 20277484 intergenic not near genes chr2L 20282857 intergenic not near genes chr2L_11_20275001 chr2L_20275001 RC1_1-HE 585 chr2L 20296505 20296541 chr2L 20296587 20296623 11 82 1.5 0.0 0.8 6.1 118 chr2L 20296505 intergenic CR43414 - chr2L 20296564 intergenic CR43414 - chr2L 20296623 intergenic CR43414 - chr2L_11_20295001 chr2L_20295001 RC1_1-HE 586 chr2L 20300001 20300018 chr2L 20300090 20300107 8 87 11.5 3.5 7.5 0.9 106 chr2L 20300001 intergenic not near genes chr2L 20300054 intergenic not near genes chr2L 20300107 intergenic not near genes chr2L_8_20300001 chr2L_20300001 RC1_1-HE 587 chr2L 20303161 20303191 chr2L 20310630 20310660 blood 16 7469 0.0 2.0 1.0 8.0 7499 chr2L 20303161 intergenic not near genes chr2L 20306910 intergenic not near genes chr2L 20310660 intergenic not near genes chr2L_16_20305001 chr2L_20305001 RC1_1-HE 588 chr2L 20310892 20310916 chr2L 20310972 20310996 4 80 0.0 5.5 2.8 1.1 104 chr2L 20310892 intergenic spir + chr2L 20310944 intergenic spir + chr2L 20310996 intergenic spir + chr2L_4_20310001 chr2L_20310001 RC1_1-HE 589 chr2L 20312568 20312602 chr2L 20312647 20312681 11 79 2.5 3.5 3.0 2.8 113 chr2L 20312568 intron spir + chr2L 20312624 intron spir + chr2L 20312681 intron spir + chr2L_11_20310001 chr2L_20310001 RC1_1-HE 590 chr2L 20320040 20320066 chr2L 20320145 20320171 19 105 4.5 6.5 5.5 2.9 131 chr2L 20320040 intron spir + chr2L 20320106 intron spir + chr2L 20320171 intron spir + chr2L_19_20320001 chr2L_20320001 RC1_1-HE 591 chr2L 20326435 20326466 chr2L 20326535 20326566 16 100 7.0 6.5 6.8 2.1 131 chr2L 20326435 intron spir + chr2L 20326500 intron spir + chr2L 20326566 intron spir + chr2L_16_20325001 chr2L_20325001 RC1_1-HE 592 chr2L 20336072 20336098 chr2L 20336158 20336183 14 86 4.5 7.0 5.8 2.1 111 chr2L 20336072 intron spir + chr2L 20336128 intron spir + chr2L 20336183 intron spir + chr2L_14_20335001 chr2L_20335001 RC1_1-HE 593 chr2L 20352753 20352768 chr2L 20352832 20352847 5 79 2.5 8.5 5.5 0.8 94 chr2L 20352753 intron RtGEF + chr2L 20352800 intron RtGEF + chr2L 20352847 intron RtGEF + chr2L_5_20350001 chr2L_20350001 RC1_1-HE 594 chr2L 20372218 20372257 chr2L 20372469 20372499 pogo 7 247 1.0 4.0 2.5 2.0 281 chr2L 20372218 intergenic Ugt37a1 - chr2L 20372358 intergenic Ugt37a1 - chr2L 20372499 exon Ugt37a1 - chr2L_7_20370001 chr2L_20370001 RC1_1-HE 595 chr2L 20396856 20396881 chr2L 20396974 20396999 11 118 2.5 4.5 3.5 2.4 143 chr2L 20396856 intron CG10947 - chr2L 20396928 intron CG10947 - chr2L 20396999 intron CG10947 - chr2L_11_20395001 chr2L_20395001 RC1_1-HE 596 chr2L 20498687 20498702 chr2L 20498787 20498802 4 100 5.5 4.5 5.0 0.7 115 chr2L 20498687 intergenic not near genes chr2L 20498744 intergenic not near genes chr2L 20498802 intergenic not near genes chr2L_4_20495001 chr2L_20495001 RC1_1-HE 597 chr2L 20517790 20517827 chr2L 20517868 20517905 21 78 6.0 5.0 5.5 3.2 115 chr2L 20517790 intergenic not near genes chr2L 20517848 intergenic not near genes chr2L 20517905 intergenic not near genes chr2L_21_20515001 chr2L_20515001 RC1_1-HE 598 chr2L 20524189 20524213 chr2L 20524272 20524296 5 83 2.5 0.0 1.2 2.3 107 chr2L 20524189 intergenic not near genes chr2L 20524242 intergenic not near genes chr2L 20524296 intergenic not near genes chr2L_5_20520001 chr2L_20520001 RC1_1-HE 599 chr2L 20568661 20568684 chr2L 20569052 20569075 X-element 7 391 2.5 4.0 3.2 1.7 414 chr2L 20568661 intron CR45347 + chr2L 20568868 intron CR45347 + chr2L 20569075 intron CR45347 + chr2L_7_20565001 chr2L_20565001 RC1_1-HE 600 chr2L 20576217 20576249 chr2L 20583685 20583718 blood 11 7468 5.0 6.5 5.8 1.6 7501 chr2L 20576217 intergenic CR45347 + chr2L 20579968 intergenic not near genes chr2L 20583718 3` UTR CR44909 - chr2L_11_20575001 chr2L_20575001 RC1_1-HE 601 chr2L 20602715 20602738 chr2L 20602804 20602827 8 89 5.5 2.5 4.0 1.6 112 chr2L 20602715 intron CR44909 - chr2L 20602771 intron CR44909 - chr2L 20602827 intron CR44909 - chr2L_8_20600001 chr2L_20600001 RC1_1-HE 602 chr2L 20630710 20630743 chr2L 20630989 20631018 8 276 2.5 3.5 3.0 2.0 308 chr2L 20630710 intergenic not near genes chr2L 20630864 intergenic not near genes chr2L 20631018 intergenic not near genes chr2L_8_20630001 chr2L_20630001 RC1_1-HE 603 chr2L 20674833 20674864 chr2L 20674919 20674943 5 83 1.5 0.0 0.8 2.8 110 chr2L 20674833 intron CG31678 - chr2L 20674888 intron CG31678 - chr2L 20674943 intron CG31678 - chr2L_5_20670001 chr2L_20670001 RC1_1-HE 604 chr2L 20795883 20795905 chr2L 20795965 20795987 13 82 4.0 6.0 5.0 2.2 104 chr2L 20795883 intron vari - chr2L 20795935 intron vari - chr2L 20795987 intron vari - chr2L_13_20795001 chr2L_20795001 RC1_1-HE 605 chr2L 20821498 20821517 chr2L 20821647 20821665 5 149 5.5 3.5 4.5 0.9 167 chr2L 20821498 intergenic not near genes chr2L 20821582 intergenic not near genes chr2L 20821665 intergenic not near genes chr2L_5_20820001 chr2L_20820001 RC1_1-HE 606 chr2L 20835806 20835839 chr2L 20836524 20836557 Quasimodo 14 718 4.5 7.0 5.8 2.1 751 chr2L 20835806 5` UTR Oseg5 - chr2L 20836182 intergenic Oseg5 -,Spn38F - chr2L 20836557 intergenic Spn38F - chr2L_14_20835001 chr2L_20835001 RC1_1-HE 607 chr2L 20862582 20862594 chr2L 20862680 20862692 7 98 0.0 5.5 2.8 1.8 110 chr2L 20862582 intergenic not near genes chr2L 20862637 intergenic not near genes chr2L 20862692 intergenic not near genes chr2L_7_20860001 chr2L_20860001 RC1_1-HE 608 chr2L 20968164 20968188 chr2L 20968251 20968275 9 86 3.0 4.5 3.8 1.9 111 chr2L 20968164 intron CG42238 - chr2L 20968220 intron CG42238 - chr2L 20968275 intron CG42238 - chr2L_9_20965001 chr2L_20965001 RC1_1-HE 609 chr2L 20971643 20971672 chr2L 20971725 20971754 10 82 3.5 5.0 4.2 1.9 111 chr2L 20971643 intron CG42238 - chr2L 20971698 intron CG42238 - chr2L 20971754 intron CG42238 - chr2L_10_20970001 chr2L_20970001 RC1_1-HE 610 chr2L 20976646 20976681 chr2L 20981462 20981497 X-element 9 4814 3.0 3.0 3.0 2.2 4851 chr2L 20976646 intron CG42238 - chr2L 20979072 intron CG42238 - chr2L 20981497 intron CG42238 - chr2L_9_20975001 chr2L_20975001 RC1_1-HE 611 chr2L 20991035 20991066 chr2L 20991114 20991145 13 79 8.0 6.0 7.0 1.6 110 chr2L 20991035 intron CG42238 - chr2L 20991090 intron CG42238 - chr2L 20991145 intron CG42238 - chr2L_13_20990001 chr2L_20990001 RC1_1-HE 612 chr2L 21006968 21006999 chr2L 21007067 21007098 12 99 3.5 5.5 4.5 2.2 130 chr2L 21006968 intron CG42238 - chr2L 21007033 intron CG42238 - chr2L 21007098 intron CG42238 - chr2L_12_21005001 chr2L_21005001 RC1_1-HE 613 chr2L 21020272 21020311 chr2L 21023950 21023989 NOF 11 3678 7.5 4.0 5.8 1.6 3717 chr2L 21020272 intron CG42238 - chr2L 21022130 intron CG42238 - chr2L 21023989 intron CG42238 - chr2L_11_21020001 chr2L_21020001 RC1_1-HE 614 chr2L 21034138 21034174 chr2L 21034220 21034256 23 82 7.5 6.0 6.8 2.9 118 chr2L 21034138 intron CG42238 - chr2L 21034197 intron CG42238 - chr2L 21034256 intron CG42238 - chr2L_23_21030001 chr2L_21030001 RC1_1-HE 615 chr2L 21041134 21041166 chr2L 21049396 21049417 Tirant 13 8258 3.5 4.0 3.8 2.7 8283 chr2L 21041134 intron CG42238 - chr2L 21045276 intron CG42238 - chr2L 21049417 intron CG42238 - chr2L_13_21045001 chr2L_21045001 RC1_1-HE 616 chr2L 21123218 21123224 chr2L 21123300 21123306 5 82 2.5 4.5 3.5 1.1 88 chr2L 21123218 intron Nhe2 + chr2L 21123262 intron Nhe2 + chr2L 21123306 intron Nhe2 + chr2L_5_21120001 chr2L_21120001 RC1_1-HE 617 chr2L 21286604 21286624 chr2L 21286683 21286703 4 79 2.0 2.5 2.2 1.2 99 chr2L 21286604 exon Mio - chr2L 21286654 intron Mio - chr2L 21286703 intron Mio - chr2L_4_21285001 chr2L_21285001 RC1_1-HE 618 chr2L 21307470 21307493 chr2L 21307553 21307576 4 83 5.0 2.5 3.8 0.8 106 chr2L 21307470 intron Mio - chr2L 21307523 intron Mio - chr2L 21307576 intron Mio - chr2L_4_21305001 chr2L_21305001 RC1_1-HE 619 chr2L 21347548 21347576 chr2L 21355021 21355049 blood 7 7473 2.0 3.0 2.5 2.0 7501 chr2L 21347548 intron Tsp39D + chr2L 21351298 intron Tsp39D + chr2L 21355049 intron Tsp39D + chr2L_7_21350001 chr2L_21350001 RC1_1-HE 620 chr2L 21597033 21597063 chr2L 21604778 21604808 roo 21 7745 8.0 9.0 8.5 2.2 7775 chr2L 21597033 intergenic not near genes chr2L 21600920 intergenic not near genes chr2L 21604808 intergenic not near genes chr2L_21_21600001 chr2L_21600001 RC1_1-HE 621 chr2L 21642868 21642902 chr2L 21642958 21642992 11 90 3.5 4.0 3.8 2.3 124 chr2L 21642868 intron Ac3 + chr2L 21642930 intron Ac3 + chr2L 21642992 intron Ac3 + chr2L_11_21640001 chr2L_21640001 RC1_1-HE 622 chr2L 21653197 21653224 chr2L 21656502 21656529 invader4 4 3305 2.5 5.5 4.0 0.8 3332 chr2L 21653197 intergenic not near genes chr2L 21654863 intergenic not near genes chr2L 21656529 intergenic not near genes chr2L_4_21650001 chr2L_21650001 RC1_1-HE 623 chr2L 21691833 21691856 chr2L 21698304 21698327 Burdock 8 6471 3.5 6.0 4.8 1.4 6494 chr2L 21691833 intron CG31619 + chr2L 21695080 intron CG31619 + chr2L 21698327 intron CG31619 + chr2L_8_21695001 chr2L_21695001 RC1_1-HE 624 chr2L 21700532 21700567 chr2L 21700618 21700653 12 86 2.5 1.5 2.0 4.0 121 chr2L 21700532 intron CG31619 + chr2L 21700592 intron CG31619 + chr2L 21700653 intron CG31619 + chr2L_12_21700001 chr2L_21700001 RC1_1-HE 625 chr2L 21747707 21747727 chr2L 21748357 21748377 6 650 0.5 2.0 1.2 2.7 670 chr2L 21747707 intron step - chr2L 21748042 intron step - chr2L 21748377 intron step - chr2L_6_21745001 chr2L_21745001 RC1_1-HE 626 chr2L 21755492 21755522 chr2L 21755617 21755644 8 124 2.5 2.5 2.5 2.3 152 chr2L 21755492 intron step - chr2L 21755568 intron step - chr2L 21755644 intron step - chr2L_8_21755001 chr2L_21755001 RC1_1-HE 627 chr2L 21771226 21771256 chr2L 21771334 21771364 13 108 2.5 5.5 4.0 2.6 138 chr2L 21771226 intron CG31612 - chr2L 21771295 intron CG31612 - chr2L 21771364 intron CG31612 - chr2L_13_21770001 chr2L_21770001 RC1_1-HE 628 chr2L 21819263 21819277 chr2L 21819423 21819437 6 160 3.5 4.0 3.8 1.2 174 chr2L 21819263 intergenic CR44786 + chr2L 21819350 intergenic CR44786 + chr2L 21819437 intergenic CR44786 + chr2L_6_21815001 chr2L_21815001 RC1_1-HE 629 chr2L 21859317 21859352 chr2L 21859398 21859433 19 81 4.5 6.5 5.5 2.9 116 chr2L 21859317 intron CR44917 + chr2L 21859375 intron CR44917 + chr2L 21859433 intron CR44917 + chr2L_19_21855001 chr2L_21855001 RC1_1-HE 630 chr2L 21871049 21871060 chr2L 21871145 21871156 5 96 8.5 3.0 5.8 0.7 107 chr2L 21871049 intergenic CR44920 - chr2L 21871102 intergenic CR44920 - chr2L 21871156 intergenic not near genes chr2L_5_21870001 chr2L_21870001 RC1_1-HE 631 chr2L 21927218 21927250 chr2L 21927295 21927327 12 77 7.5 4.5 6.0 1.7 109 chr2L 21927218 intergenic not near genes chr2L 21927272 intergenic not near genes chr2L 21927327 intergenic not near genes chr2L_12_21925001 chr2L_21925001 RC1_1-HE 632 chr2L 21981679 21981715 chr2L 21990845 21990881 roo 17 9166 2.0 5.0 3.5 3.8 9202 chr2L 21981679 exon CG2528 - chr2L 21986280 intron CG2528 - chr2L 21990881 exon CG2528 - chr2L_17_21985001 chr2L_21985001 RC1_1-HE 633 chr2L 22073872 22073902 chr2L 22073954 22073984 13 82 5.0 4.5 4.8 2.2 112 chr2L 22073872 intergenic not near genes chr2L 22073928 intergenic not near genes chr2L 22073984 intergenic not near genes chr2L_13_22070001 chr2L_22070001 RC1_1-HE 634 chr2L 22084250 22084284 chr2L 22084332 22084366 15 82 4.0 3.0 3.5 3.3 116 chr2L 22084250 intergenic not near genes chr2L 22084308 intergenic not near genes chr2L 22084366 intergenic not near genes chr2L_15_22080001 chr2L_22080001 RC1_1-HE 635 chr2L 22165512 22165541 chr2L 22165599 22165627 5 86 0.5 1.0 0.8 2.8 115 chr2L 22165512 3` UTR CG42748 + chr2L 22165570 3` UTR CG42748 + chr2L 22165627 3` UTR CG42748 + chr2L_5_22165001 chr2L_22165001 RC1_1-HE 636 chr2L 22192025 22192051 chr2L 22192115 22192141 8 90 3.0 1.5 2.2 2.5 116 chr2L 22192025 intron Ir40a - chr2L 22192083 intron Ir40a - chr2L 22192141 intron Ir40a - chr2L_8_22190001 chr2L_22190001 RC1_1-HE 637 chr2L 22258622 22258641 chr2L 22260747 22260766 G6 6 2125 3.0 4.0 3.5 1.3 2144 chr2L 22258622 intergenic Tif-IA + chr2L 22259694 intergenic not near genes chr2L 22260766 intergenic not near genes chr2L_6_22255001 chr2L_22255001 RC1_1-HE 638 chr2L 22548930 22548945 chr2L 22550156 22550171 1360 7 1226 0.5 7.5 4.0 1.4 1241 chr2L 22548930 intergenic CG17490 + chr2L 22549550 intergenic not near genes chr2L 22550171 intergenic CG17493 + chr2L_7_22545001 chr2L_22545001 RC1_1-HE 639 chr2L 22674067 22674087 chr2L 22674145 22674165 7 78 3.0 3.0 3.0 1.8 98 chr2L 22674067 intron CG40006 - chr2L 22674116 intron CG40006 - chr2L 22674165 intron CG40006 - chr2L_7_22670001 chr2L_22670001 RC1_1-HE 640 chr2L 22679803 22679826 chr2L 22684576 22684599 F-element 9 4773 1.0 3.0 2.0 3.0 4796 chr2L 22679803 intron CG40006 - chr2L 22682201 intron CG40006 - chr2L 22684599 intron CG40006 - chr2L_9_22680001 chr2L_22680001 RC1_1-HE 641 chr2L 22724028 22724037 chr2L 22724120 22724129 4 92 2.5 0.0 1.2 1.8 101 chr2L 22724028 intron CG40006 - chr2L 22724078 intron CG40006 - chr2L 22724129 intron CG40006 - chr2L_4_22720001 chr2L_22720001 RC1_1-HE 642 chr2L 22776424 22776437 chr2L 22778214 22778227 S-element 5 1790 2.5 3.0 2.8 1.3 1803 chr2L 22776424 intergenic not near genes chr2L 22777326 intergenic not near genes chr2L 22778227 intergenic not near genes chr2L_5_22775001 chr2L_22775001 RC1_1-HE 643 chr2R 469967 469979 chr2R 473208 473221 F-element 4 3242 2.5 9.5 6.0 0.6 3254 chr2R 469967 intergenic not near genes chr2R 471594 intergenic not near genes chr2R 473221 intergenic not near genes chr2R_4_470001 chr2R_470001 RC1_1-HE 644 chr2R 552769 552788 chr2R 553987 553990 1360 7 1216 4.0 6.0 5.0 1.2 1221 chr2R 552769 intron CG40378 + chr2R 553380 intron CG40378 + chr2R 553990 intron CG40378 + chr2R_7_550001 chr2R_550001 RC1_1-HE 645 chr2R 1365864 1365896 chr2R 1365977 1366009 19 113 4.0 4.5 4.2 3.7 145 chr2R 1365864 intron l(2)41Ab + chr2R 1365936 intron l(2)41Ab + chr2R 1366009 intron l(2)41Ab + chr2R_19_1365001 chr2R_1365001 RC1_1-HE 646 chr2R 2015129 2015165 chr2R 2015207 2015243 14 78 2.0 3.0 2.5 4.0 114 chr2R 2015129 intron CG17684 - chr2R 2015186 intron CG17684 - chr2R 2015243 intron CG17684 - chr2R_14_2015001 chr2R_2015001 RC1_1-HE 647 chr2R 2498981 2499015 chr2R 2508129 2508163 roo 7 9148 2.5 3.5 3.0 1.8 9182 chr2R 2498981 intron MFS17 - chr2R 2503572 intron MFS17 - chr2R 2508163 intron MFS17 - chr2R_7_2500001 chr2R_2500001 RC1_1-HE 648 chr2R 2508306 2508338 chr2R 2508445 2508477 8 136 1.5 2.5 2.0 2.7 171 chr2R 2508306 intron MFS17 - chr2R 2508392 intron MFS17 - chr2R 2508477 intron MFS17 - chr2R_8_2505001 chr2R_2505001 RC1_1-HE 649 chr2R 3089389 3089397 chr2R 3089489 3089497 8 99 2.0 5.5 3.8 1.7 108 chr2R 3089389 intron CG42596 + chr2R 3089443 intron CG42596 + chr2R 3089497 intron CG42596 + chr2R_8_3085001 chr2R_3085001 RC1_1-HE 650 chr2R 3291817 3292100 chr2R 3914992 3915262 7 623167 15.5 13.0 14.2 0.5 623445 chr2R 3291817 intergenic not near genes chr2R 3603540 intergenic not near genes chr2R 3915262 intron uex - chr2R_7_3600001 chr2R_3600001 RC1_1-HE 651 chr2R 3532618 3532644 chr2R 3536062 3536088 Doc 4 3444 1.0 2.0 1.5 1.6 3470 chr2R 3532618 intergenic not near genes chr2R 3534353 intergenic not near genes chr2R 3536088 intergenic not near genes chr2R_4_3530001 chr2R_3530001 RC1_1-HE 652 chr2R 3818930 3818942 chr2R 3819047 3819059 10 117 5.5 3.5 4.5 1.8 129 chr2R 3818930 intergenic not near genes chr2R 3818994 intergenic not near genes chr2R 3819059 intergenic not near genes chr2R_10_3815001 chr2R_3815001 RC1_1-HE 653 chr2R 4312950 4313124 chr2R 4313035 4313217 15 88 4.0 2.5 3.2 3.6 267 chr2R 4312950 intergenic not near genes chr2R 4313084 intergenic not near genes chr2R 4313217 intergenic not near genes chr2R_15_4310001 chr2R_4310001 RC1_1-HE 654 chr2R 4329169 4329197 chr2R 4329341 4329369 10 172 8.0 2.0 5.0 1.7 200 chr2R 4329169 intron Gprk1 - chr2R 4329269 intron Gprk1 - chr2R 4329369 intron Gprk1 - chr2R_10_4325001 chr2R_4325001 RC1_1-HE 655 chr2R 4387295 4387313 chr2R 4387447 4387465 8 152 2.5 0.0 1.2 3.6 170 chr2R 4387295 intron Gprk1 - chr2R 4387380 intron Gprk1 - chr2R 4387465 intron Gprk1 - chr2R_8_4385001 chr2R_4385001 RC1_1-HE 656 chr2R 4517563 4517569 chr2R 4517717 4517723 4 154 1.5 2.5 2.0 1.3 160 chr2R 4517563 intergenic not near genes chr2R 4517643 intergenic not near genes chr2R 4517723 intergenic not near genes chr2R_4_4515001 chr2R_4515001 RC1_1-HE 657 chr2R 4658130 4658152 chr2R 4658587 4658609 5 455 9.5 2.0 5.8 0.7 479 chr2R 4658130 intergenic not near genes chr2R 4658370 intergenic not near genes chr2R 4658609 intergenic not near genes chr2R_5_4655001 chr2R_4655001 RC1_1-HE 658 chr2R 4746229 4746258 chr2R 4746856 4746885 9 627 1.0 1.0 1.0 4.5 656 chr2R 4746229 intron conu + chr2R 4746557 intron conu + chr2R 4746885 intron conu + chr2R_9_4745001 chr2R_4745001 RC1_1-HE 659 chr2R 4838872 4838883 chr2R 4840396 4840407 transib2 6 1524 2.5 5.5 4.0 1.2 1535 chr2R 4838872 intergenic not near genes chr2R 4839640 intergenic not near genes chr2R 4840407 intergenic not near genes chr2R_6_4835001 chr2R_4835001 RC1_1-HE 660 chr2R 4887621 4887647 chr2R 4887818 4887844 10 197 2.5 7.5 5.0 1.7 223 chr2R 4887621 intergenic not near genes chr2R 4887732 intergenic not near genes chr2R 4887844 intergenic not near genes chr2R_10_4885001 chr2R_4885001 RC1_1-HE 661 chr2R 4916092 4916124 chr2R 4916171 4916203 10 79 3.5 4.5 4.0 2.0 111 chr2R 4916092 intergenic not near genes chr2R 4916148 intergenic not near genes chr2R 4916203 intergenic not near genes chr2R_10_4915001 chr2R_4915001 RC1_1-HE 662 chr2R 4933356 4933384 chr2R 4933921 4933938 9 561 3.0 2.0 2.5 2.6 582 chr2R 4933356 intron Ir41a + chr2R 4933647 intron Ir41a + chr2R 4933938 intron Ir41a + chr2R_9_4930001 chr2R_4930001 RC1_1-HE 663 chr2R 5028515 5028528 chr2R 5028709 5028721 4 194 11.0 0.5 5.8 0.6 206 chr2R 5028515 intergenic not near genes chr2R 5028618 intergenic not near genes chr2R 5028721 intergenic not near genes chr2R_4_5025001 chr2R_5025001 RC1_1-HE 664 chr2R 5217512 5217540 chr2R 5217604 5217632 9 92 3.5 7.5 5.5 1.4 120 chr2R 5217512 intron Nipped-A - chr2R 5217572 intron Nipped-A - chr2R 5217632 intron Nipped-A - chr2R_9_5215001 chr2R_5215001 RC1_1-HE 665 chr2R 5410314 5410342 chr2R 5410470 5410498 14 156 5.5 4.5 5.0 2.3 184 chr2R 5410314 intergenic not near genes chr2R 5410406 intergenic not near genes chr2R 5410498 intergenic not near genes chr2R_14_5410001 chr2R_5410001 RC1_1-HE 666 chr2R 5417992 5418027 chr2R 5420625 5420660 Burdock 8 2630 3.0 3.5 3.2 1.9 2668 chr2R 5417992 intron laccase2 + chr2R 5419326 intron laccase2 + chr2R 5420660 intron laccase2 + chr2R_8_5415001 chr2R_5415001 RC1_1-HE 667 chr2R 5460521 5460553 chr2R 5460624 5460658 12 105 1.0 5.0 3.0 3.0 137 chr2R 5460521 intergenic not near genes chr2R 5460590 intergenic not near genes chr2R 5460658 intergenic not near genes chr2R_12_5460001 chr2R_5460001 RC1_1-HE 668 chr2R 5466882 5466903 chr2R 5467021 5467042 5 139 3.0 2.0 2.5 1.4 160 chr2R 5466882 intergenic not near genes chr2R 5466962 intergenic not near genes chr2R 5467042 intergenic not near genes chr2R_5_5465001 chr2R_5465001 RC1_1-HE 669 chr2R 5467357 5467392 chr2R 5467468 5467488 4 107 1.0 2.5 1.8 1.4 131 chr2R 5467357 intergenic not near genes chr2R 5467422 intergenic not near genes chr2R 5467488 intergenic not near genes chr2R_4_5465001 chr2R_5465001 RC1_1-HE 670 chr2R 5472367 5472393 chr2R 5472461 5472488 5 95 3.0 1.5 2.2 1.6 121 chr2R 5472367 intron CG30440 - chr2R 5472428 intron CG30440 - chr2R 5472488 intron CG30440 - chr2R_5_5470001 chr2R_5470001 RC1_1-HE 671 chr2R 5476356 5476381 chr2R 5476901 5476926 11 545 3.5 1.5 2.5 3.1 570 chr2R 5476356 intron CG30440 - chr2R 5476641 intron CG30440 - chr2R 5476926 intron CG30440 - chr2R_11_5475001 chr2R_5475001 RC1_1-HE 672 chr2R 5491660 5491696 chr2R 5491754 5491790 12 94 5.5 4.5 5.0 2.0 130 chr2R 5491660 intron CG30440 - chr2R 5491725 intron CG30440 - chr2R 5491790 intron CG30440 - chr2R_12_5490001 chr2R_5490001 RC1_1-HE 673 chr2R 5543197 5543223 chr2R 5547282 5547308 invader1 9 4085 0.0 5.0 2.5 2.6 4111 chr2R 5543197 intron CG30438 + chr2R 5545252 intron CG30438 + chr2R 5547308 intron CG30438 + chr2R_9_5545001 chr2R_5545001 RC1_1-HE 674 chr2R 5581398 5581404 chr2R 5627608 5627614 8 46210 7.0 17.0 12.0 0.6 46216 chr2R 5581398 intergenic not near genes chr2R 5604506 exon Fis1 - chr2R 5627614 intergenic not near genes chr2R_8_5600001 chr2R_5600001 RC1_1-HE 675 chr2R 5581407 5581425 chr2R 5627598 5627635 8 46208 5.0 14.5 9.8 0.7 46228 chr2R 5581407 intergenic not near genes chr2R 5604521 intron Fis1 - chr2R 5627635 intergenic not near genes chr2R_8_5600001 chr2R_5600001 RC1_1-HE 676 chr2R 5746620 5746652 chr2R 5746699 5746731 4 79 1.5 1.5 1.5 1.6 111 chr2R 5746620 intergenic not near genes chr2R 5746676 intergenic not near genes chr2R 5746731 intergenic not near genes chr2R_4_5745001 chr2R_5745001 RC1_1-HE 677 chr2R 5772517 5772747 chr2R 5772597 5772861 30 98 4.0 4.5 4.2 5.8 344 chr2R 5772517 3` UTR Gp210 + chr2R 5772689 3` UTR Gp210 + chr2R 5772861 3` UTR Gp210 + chr2R_30_5770001 chr2R_5770001 RC1_1-HE 678 chr2R 5869276 5869309 chr2R 5874353 5874386 flea 13 5077 5.5 4.0 4.8 2.2 5110 chr2R 5869276 intergenic not near genes chr2R 5871831 intergenic not near genes chr2R 5874386 intergenic not near genes chr2R_13_5870001 chr2R_5870001 RC1_1-HE 679 chr2R 5878925 5878959 chr2R 5879006 5879040 21 81 1.5 1.5 1.5 8.4 115 chr2R 5878925 intergenic CG44438 - chr2R 5878982 intergenic CG44438 - chr2R 5879040 intergenic CG44438 - chr2R_21_5875001 chr2R_5875001 RC1_1-HE 680 chr2R 5902154 5902190 chr2R 5909714 5909725 17.6 16 7558 5.0 6.5 5.8 2.4 7571 chr2R 5902154 intron CG43366 + chr2R 5905940 intron CG43366 + chr2R 5909725 intron CG43366 + chr2R_16_5905001 chr2R_5905001 RC1_1-HE 681 chr2R 5947934 5947963 chr2R 5948086 5948115 16 152 6.5 0.0 3.2 3.8 181 chr2R 5947934 intergenic not near genes chr2R 5948024 intergenic not near genes chr2R 5948115 intergenic not near genes chr2R_16_5945001 chr2R_5945001 RC1_1-HE 682 chr2R 5953082 5953094 chr2R 5953161 5953173 5 78 7.5 0.5 4.0 1.0 91 chr2R 5953082 intergenic not near genes chr2R 5953128 intergenic not near genes chr2R 5953173 intergenic not near genes chr2R_5_5950001 chr2R_5950001 RC1_1-HE 683 chr2R 6033442 6033474 chr2R 6033528 6033560 6 86 5.0 4.0 4.5 1.1 118 chr2R 6033442 intron SCAP - chr2R 6033501 intron SCAP - chr2R 6033560 intron SCAP - chr2R_6_6030001 chr2R_6030001 RC1_1-HE 684 chr2R 6047884 6047892 chr2R 6048377 6048385 5 493 6.5 6.5 6.5 0.7 501 chr2R 6047884 intergenic CR44130 -,CG34211 + chr2R 6048134 intergenic CR44130 - chr2R 6048385 intergenic not near genes chr2R_5_6045001 chr2R_6045001 RC1_1-HE 685 chr2R 6047894 6047910 chr2R 6048375 6048406 5 493 2.0 6.0 4.0 1.0 512 chr2R 6047894 intergenic CR44130 - chr2R 6048150 intergenic CR44130 - chr2R 6048406 intergenic not near genes chr2R_5_6045001 chr2R_6045001 RC1_1-HE 686 chr2R 6050303 6050317 chr2R 6050397 6050411 8 94 8.5 0.0 4.2 1.5 108 chr2R 6050303 intergenic CG34212 - chr2R 6050357 intergenic CG34212 - chr2R 6050411 intergenic CG34212 - chr2R_8_6050001 chr2R_6050001 RC1_1-HE 687 chr2R 6073086 6073115 chr2R 6073182 6073211 8 96 4.0 4.0 4.0 1.6 125 chr2R 6073086 intergenic not near genes chr2R 6073148 intergenic not near genes chr2R 6073211 intergenic not near genes chr2R_8_6070001 chr2R_6070001 RC1_1-HE 688 chr2R 6076428 6076444 chr2R 6076700 6076716 5 272 4.0 3.0 3.5 1.1 288 chr2R 6076428 intergenic CG7845 -,CG7849 + chr2R 6076572 intergenic CG7845 -,CG7849 + chr2R 6076716 intergenic CG7849 +,CG7845 - chr2R_5_6075001 chr2R_6075001 RC1_1-HE 689 chr2R 6096714 6096751 chr2R 6101913 6101950 BS 10 5198 7.5 7.5 7.5 1.2 5236 chr2R 6096714 intron EcR - chr2R 6099332 intron EcR - chr2R 6101950 intron EcR - chr2R_10_6095001 chr2R_6095001 RC1_1-HE 690 chr2R 6178121 6178145 chr2R 6178248 6178272 8 127 3.0 3.0 3.0 2.0 151 chr2R 6178121 intergenic not near genes chr2R 6178196 intergenic not near genes chr2R 6178272 intergenic not near genes chr2R_8_6175001 chr2R_6175001 RC1_1-HE 691 chr2R 6193410 6193425 chr2R 6193516 6193541 8 117 3.0 4.5 3.8 1.7 131 chr2R 6193410 intron Ptr - chr2R 6193476 intron Ptr - chr2R 6193541 intron Ptr - chr2R_8_6190001 chr2R_6190001 RC1_1-HE 692 chr2R 6519242 6519276 chr2R 6519326 6519360 7 84 2.5 3.0 2.8 1.8 118 chr2R 6519242 intron jing + chr2R 6519301 intron jing + chr2R 6519360 intron jing + chr2R_7_6515001 chr2R_6515001 RC1_1-HE 693 chr2R 6526140 6526147 chr2R 6526278 6526285 4 138 10.5 2.5 6.5 0.5 145 chr2R 6526140 intron jing + chr2R 6526212 intron jing + chr2R 6526285 intron jing + chr2R_4_6525001 chr2R_6525001 RC1_1-HE 694 chr2R 6539846 6539853 chr2R 6539962 6539969 4 116 1.5 3.0 2.2 1.2 123 chr2R 6539846 intron jing + chr2R 6539908 intron jing + chr2R 6539969 intron jing + chr2R_4_6535001 chr2R_6535001 RC1_1-HE 695 chr2R 6572372 6572401 chr2R 6572482 6572511 27 108 3.5 11.5 7.5 3.2 139 chr2R 6572372 intron jing + chr2R 6572442 intron jing + chr2R 6572511 intron jing + chr2R_27_6570001 chr2R_6570001 RC1_1-HE 696 chr2R 6579770 6579804 chr2R 6584857 6584891 flea 13 5087 5.0 4.0 4.5 2.4 5121 chr2R 6579770 intron jing + chr2R 6582330 intron jing + chr2R 6584891 intron jing + chr2R_13_6580001 chr2R_6580001 RC1_1-HE 697 chr2R 6607926 6607954 chr2R 6608029 6608057 18 103 6.5 6.5 6.5 2.4 131 chr2R 6607926 intron jing + chr2R 6607992 intron jing + chr2R 6608057 intron jing + chr2R_18_6605001 chr2R_6605001 RC1_1-HE 698 chr2R 6622142 6622175 chr2R 6622615 6622648 invader1 13 473 6.0 4.5 5.2 2.1 506 chr2R 6622142 intergenic not near genes chr2R 6622395 intergenic not near genes chr2R 6622648 intergenic not near genes chr2R_13_6620001 chr2R_6620001 RC1_1-HE 699 chr2R 6650211 6650245 chr2R 6650302 6650336 12 91 2.0 4.0 3.0 3.0 125 chr2R 6650211 intron debcl + chr2R 6650274 intron debcl + chr2R 6650336 intron debcl + chr2R_12_6650001 chr2R_6650001 RC1_1-HE 700 chr2R 6664181 6664200 chr2R 6665972 6665991 S-element 5 1791 2.5 3.0 2.8 1.3 1810 chr2R 6664181 intron,3` UTR Adf1 +,CR45128 - chr2R 6665086 intron Adf1 + chr2R 6665991 intron Adf1 + chr2R_5_6665001 chr2R_6665001 RC1_1-HE 701 chr2R 6697585 6697600 chr2R 6697892 6697907 4 307 4.5 1.5 3.0 1.0 322 chr2R 6697585 intron Rab2 + chr2R 6697746 intron Rab2 + chr2R 6697907 intron Rab2 + chr2R_4_6695001 chr2R_6695001 RC1_1-HE 702 chr2R 6784672 6784699 chr2R 6784771 6784798 9 99 5.5 3.0 4.2 1.7 126 chr2R 6784672 intron Epac - chr2R 6784735 intron Epac - chr2R 6784798 intron Epac - chr2R_9_6780001 chr2R_6780001 RC1_1-HE 703 chr2R 6896740 6896752 chr2R 6896843 6896855 9 103 5.0 15.0 10.0 0.8 115 chr2R 6896740 intron CG30158 + chr2R 6896798 intron CG30158 + chr2R 6896855 intron CG30158 + chr2R_9_6895001 chr2R_6895001 RC1_1-HE 704 chr2R 6919464 6919483 chr2R 6919544 6919563 6 80 0.0 6.0 3.0 1.5 99 chr2R 6919464 intron CG30158 + chr2R 6919514 intron CG30158 + chr2R 6919563 intron CG30158 + chr2R_6_6915001 chr2R_6915001 RC1_1-HE 705 chr2R 6983068 6983100 chr2R 6983155 6983186 10 87 0.0 5.0 2.5 2.9 118 chr2R 6983068 intron,intron vimar -,CG30156 - chr2R 6983127 intron,intron vimar -,CG30156 - chr2R 6983186 intron,intron vimar -,CG30156 - chr2R_10_6980001 chr2R_6980001 RC1_1-HE 706 chr2R 7049225 7049256 chr2R 7049309 7049341 16 85 1.5 1.0 1.2 7.3 116 chr2R 7049225 intergenic lbm + chr2R 7049283 5` UTR lbm + chr2R 7049341 intron lbm + chr2R_16_7045001 chr2R_7045001 RC1_1-HE 707 chr2R 7067595 7067624 chr2R 7067680 7067709 14 85 3.0 3.0 3.0 3.5 114 chr2R 7067595 intergenic not near genes chr2R 7067652 intergenic not near genes chr2R 7067709 intergenic not near genes chr2R_14_7065001 chr2R_7065001 RC1_1-HE 708 chr2R 7139945 7139950 chr2R 7141416 7141443 hopper2 4 1488 5.0 3.5 4.2 0.8 1498 chr2R 7139945 intergenic not near genes chr2R 7140694 intergenic not near genes chr2R 7141443 intergenic not near genes chr2R_4_7140001 chr2R_7140001 RC1_1-HE 709 chr2R 7160556 7160585 chr2R 7160635 7160664 15 79 5.5 4.5 5.0 2.5 108 chr2R 7160556 intron pk + chr2R 7160610 intron pk + chr2R 7160664 intron pk + chr2R_15_7160001 chr2R_7160001 RC1_1-HE 710 chr2R 7164272 7164287 chr2R 7164464 7164471 10 191 5.0 5.0 5.0 1.7 199 chr2R 7164272 intron pk + chr2R 7164372 intron pk + chr2R 7164471 intron pk + chr2R_10_7160001 chr2R_7160001 RC1_1-HE 711 chr2R 7196562 7196596 chr2R 7201338 7201372 F-element 9 4776 1.5 5.5 3.5 2.0 4810 chr2R 7196562 intron pk + chr2R 7198967 intron pk + chr2R 7201372 intron pk + chr2R_9_7195001 chr2R_7195001 RC1_1-HE 712 chr2R 7209849 7209871 chr2R 7217598 7217620 roo 9 7749 5.0 8.0 6.5 1.2 7771 chr2R 7209849 intron pk + chr2R 7213734 intron pk + chr2R 7217620 intron pk + chr2R_9_7210001 chr2R_7210001 RC1_1-HE 713 chr2R 7235823 7235851 chr2R 7240916 7240944 jockey 10 5091 2.0 1.0 1.5 4.0 5121 chr2R 7235823 intergenic not near genes chr2R 7238384 intergenic not near genes chr2R 7240944 intergenic not near genes chr2R_10_7235001 chr2R_7235001 RC1_1-HE 714 chr2R 7294530 7294549 chr2R 7294615 7294634 8 85 4.0 10.0 7.0 1.0 104 chr2R 7294530 intron pwn + chr2R 7294582 intron pwn + chr2R 7294634 intron pwn + chr2R_8_7290001 chr2R_7290001 RC1_1-HE 715 chr2R 7357619 7357645 chr2R 7357690 7357722 13 76 5.0 4.5 4.8 2.2 103 chr2R 7357619 intron Dscam1 - chr2R 7357670 intron Dscam1 - chr2R 7357722 intron Dscam1 - chr2R_13_7355001 chr2R_7355001 RC1_1-HE 716 chr2R 7417904 7418169 chr2R 7417991 7418249 23 81 4.5 5.5 5.0 3.8 345 chr2R 7417904 intergenic not near genes chr2R 7418076 intergenic not near genes chr2R 7418249 intergenic not near genes chr2R_23_7415001 chr2R_7415001 RC1_1-HE 717 chr2R 7434892 7434914 chr2R 7439194 7439216 Juan 4 4302 3.5 3.5 3.5 0.9 4324 chr2R 7434892 intergenic so + chr2R 7437054 intergenic not near genes chr2R 7439216 intergenic not near genes chr2R_4_7435001 chr2R_7435001 RC1_1-HE 718 chr2R 7532136 7532147 chr2R 7532338 7532349 7 202 4.0 7.5 5.8 1.0 213 chr2R 7532136 intron Drat - chr2R 7532242 intron Drat - chr2R 7532349 intron Drat - chr2R_7_7530001 chr2R_7530001 RC1_1-HE 719 chr2R 7543606 7543607 chr2R 11263379 11263383 4 3719775 19.0 10.0 14.5 0.3 3719777 chr2R 7543606 intron Corin + chr2R 9403494 intron wun - chr2R 11263383 intergenic not near genes chr2R_4_9400001 chr2R_9400001 RC1_1-HE 720 chr2R 7553817 7553833 chr2R 7554163 7554179 12 346 2.5 8.5 5.5 1.8 362 chr2R 7553817 intron Corin + chr2R 7553998 intron Corin + chr2R 7554179 intron Corin + chr2R_12_7550001 chr2R_7550001 RC1_1-HE 721 chr2R 7567660 7567687 chr2R 7567745 7567772 12 85 4.0 4.5 4.2 2.3 112 chr2R 7567660 intron Vps13 + chr2R 7567716 intron Vps13 + chr2R 7567772 intron Vps13 + chr2R_12_7565001 chr2R_7565001 RC1_1-HE 722 chr2R 7597722 7597750 chr2R 7597821 7597849 11 99 2.5 1.0 1.8 3.9 127 chr2R 7597722 intron CG1358 - chr2R 7597786 intron CG1358 - chr2R 7597849 intron CG1358 - chr2R_11_7595001 chr2R_7595001 RC1_1-HE 723 chr2R 7608406 7608428 chr2R 7613610 7613632 I-element 17 5204 3.0 0.0 1.5 6.8 5226 chr2R 7608406 intron CG1358 - chr2R 7611019 intron CG1358 - chr2R 7613632 intron CG1358 - chr2R_17_7610001 chr2R_7610001 RC1_1-HE 724 chr2R 7631247 7631279 chr2R 7631338 7631370 10 91 3.5 3.0 3.2 2.4 123 chr2R 7631247 intron CG43340 + chr2R 7631308 intron CG43340 + chr2R 7631370 intron CG43340 + chr2R_10_7630001 chr2R_7630001 RC1_1-HE 725 chr2R 7642877 7642883 chr2R 7642958 7642964 4 81 4.0 7.5 5.8 0.6 87 chr2R 7642877 intron CG43340 + chr2R 7642920 intron CG43340 + chr2R 7642964 intron CG43340 + chr2R_4_7640001 chr2R_7640001 RC1_1-HE 726 chr2R 7693176 7693207 chr2R 7693354 7693379 5 177 2.5 3.0 2.8 1.3 203 chr2R 7693176 intron CG1399 - chr2R 7693278 intron CG1399 - chr2R 7693379 intron CG1399 - chr2R_5_7690001 chr2R_7690001 RC1_1-HE 727 chr2R 7696667 7696694 chr2R 7696817 7696844 13 150 2.5 1.5 2.0 4.3 177 chr2R 7696667 intron CG1399 - chr2R 7696756 intron CG1399 - chr2R 7696844 intron CG1399 - chr2R_13_7695001 chr2R_7695001 RC1_1-HE 728 chr2R 7760283 7760305 chr2R 7760421 7760443 12 138 6.5 9.0 7.8 1.4 160 chr2R 7760283 intron,intron CG30497 -,CG45093 - chr2R 7760363 intron,intron CG30497 -,CG45093 - chr2R 7760443 intron,intron CG30497 -,CG45093 - chr2R_12_7760001 chr2R_7760001 RC1_1-HE 729 chr2R 7815684 7815704 chr2R 7822154 7822174 Burdock 4 6470 0.5 4.0 2.2 1.2 6490 chr2R 7815684 intergenic CG1882 + chr2R 7818929 intergenic not near genes chr2R 7822174 3` UTR cathD - chr2R_4_7815001 chr2R_7815001 RC1_1-HE 730 chr2R 7856979 7857014 chr2R 7857349 7857384 28 366 8.5 7.5 8.0 3.1 405 chr2R 7856979 intron Dgk - chr2R 7857182 intron Dgk - chr2R 7857384 intron Dgk - chr2R_28_7855001 chr2R_7855001 RC1_1-HE 731 chr2R 7869189 7869215 chr2R 7873976 7874002 Doc 10 4787 4.0 4.5 4.2 1.9 4813 chr2R 7869189 intron Dgk - chr2R 7871596 intron Dgk - chr2R 7874002 intron Dgk - chr2R_10_7870001 chr2R_7870001 RC1_1-HE 732 chr2R 7899530 7899534 chr2R 10066494 10066498 4 2166964 6.0 11.5 8.8 0.4 2166968 chr2R 7899530 intron CG30377 + chr2R 8983014 intron CG8213 - chr2R 10066498 5` UTR CG2292 - chr2R_4_8980001 chr2R_8980001 RC1_1-HE 733 chr2R 7942931 7942955 chr2R 7943189 7943207 9 257 3.5 2.0 2.8 2.4 276 chr2R 7942931 intron CG14764 - chr2R 7943069 intron CG14764 - chr2R 7943207 intron CG14764 - chr2R_9_7940001 chr2R_7940001 RC1_1-HE 734 chr2R 7951644 7951665 chr2R 7951772 7951793 7 128 2.5 5.0 3.8 1.5 149 chr2R 7951644 intron CG14764 - chr2R 7951718 intron CG14764 - chr2R 7951793 intron CG14764 - chr2R_7_7950001 chr2R_7950001 RC1_1-HE 735 chr2R 7997027 7997043 chr2R 7997116 7997132 10 89 1.0 4.0 2.5 2.9 105 chr2R 7997027 intron Hey - chr2R 7997080 intron Hey - chr2R 7997132 intron Hey - chr2R_10_7995001 chr2R_7995001 RC1_1-HE 736 chr2R 8015647 8015682 chr2R 8017668 8017706 11 2023 2.5 4.0 3.2 2.6 2059 chr2R 8015647 intergenic mir-4981 + chr2R 8016676 intergenic not near genes chr2R 8017706 intergenic not near genes chr2R_11_8015001 chr2R_8015001 RC1_1-HE 737 chr2R 8114030 8114063 chr2R 8114120 8114153 13 88 0.0 3.0 1.5 5.2 123 chr2R 8114030 intergenic Asap - chr2R 8114092 intergenic Asap - chr2R 8114153 intergenic Asap - chr2R_13_8110001 chr2R_8110001 RC1_1-HE 738 chr2R 8155578 8155610 chr2R 8155668 8155700 15 90 1.0 8.0 4.5 2.7 122 chr2R 8155578 intron,intron Lpin -,kermit - chr2R 8155639 intron,intron Lpin -,kermit - chr2R 8155700 intron,intron Lpin -,kermit - chr2R_15_8155001 chr2R_8155001 RC1_1-HE 739 chr2R 8182634 8182665 chr2R 8182823 8182854 7 189 3.5 4.5 4.0 1.4 220 chr2R 8182634 intron LRP1 + chr2R 8182744 intron LRP1 + chr2R 8182854 intron LRP1 + chr2R_7_8180001 chr2R_8180001 RC1_1-HE 740 chr2R 8209605 8209622 chr2R 8209683 8209686 4 74 4.0 5.5 4.8 0.7 81 chr2R 8209605 exon LRP1 + chr2R 8209646 intron LRP1 + chr2R 8209686 intron LRP1 + chr2R_4_8205001 chr2R_8205001 RC1_1-HE 741 chr2R 8251752 8251933 chr2R 8251847 8252022 10 94 0.5 0.5 0.5 6.7 270 chr2R 8251752 intergenic not near genes chr2R 8251887 intergenic not near genes chr2R 8252022 intergenic not near genes chr2R_10_8250001 chr2R_8250001 RC1_1-HE 742 chr2R 8273426 8273455 chr2R 8273691 8273720 6 265 2.0 6.5 4.2 1.2 294 chr2R 8273426 intergenic not near genes chr2R 8273573 intergenic not near genes chr2R 8273720 intergenic not near genes chr2R_6_8270001 chr2R_8270001 RC1_1-HE 743 chr2R 8330861 8330889 chr2R 8331348 8331376 roo 16 487 3.5 6.5 5.0 2.7 515 chr2R 8330861 intron pdm3 + chr2R 8331118 intron pdm3 + chr2R 8331376 intron pdm3 + chr2R_16_8330001 chr2R_8330001 RC1_1-HE 744 chr2R 8332575 8332607 chr2R 8332728 8332760 15 153 4.5 4.5 4.5 2.7 185 chr2R 8332575 intron pdm3 + chr2R 8332668 intron pdm3 + chr2R 8332760 intron pdm3 + chr2R_15_8330001 chr2R_8330001 RC1_1-HE 745 chr2R 8339285 8339302 chr2R 8339369 8339386 7 84 3.0 5.0 4.0 1.4 101 chr2R 8339285 intron pdm3 + chr2R 8339336 intron pdm3 + chr2R 8339386 intron pdm3 + chr2R_7_8335001 chr2R_8335001 RC1_1-HE 746 chr2R 8398213 8398240 chr2R 8402995 8403022 Doc 6 4782 3.5 4.0 3.8 1.2 4809 chr2R 8398213 intron CG2121 - chr2R 8400618 intron CG2121 - chr2R 8403022 intron CG2121 - chr2R_6_8400001 chr2R_8400001 RC1_1-HE 747 chr2R 8403438 8403456 chr2R 8403522 8403540 7 84 3.5 3.0 3.2 1.7 102 chr2R 8403438 intron CG2121 - chr2R 8403489 intron CG2121 - chr2R 8403540 intron CG2121 - chr2R_7_8400001 chr2R_8400001 RC1_1-HE 748 chr2R 8429307 8429336 chr2R 8429390 8429422 9 86 2.0 1.5 1.8 3.2 115 chr2R 8429307 intergenic not near genes chr2R 8429364 intergenic not near genes chr2R 8429422 intergenic not near genes chr2R_9_8425001 chr2R_8425001 RC1_1-HE 749 chr2R 8435338 8435371 chr2R 8435423 8435456 12 85 2.0 3.5 2.8 3.2 118 chr2R 8435338 5` UTR Lcp3 + chr2R 8435397 5` UTR Lcp3 + chr2R 8435456 5` UTR Lcp3 + chr2R_12_8435001 chr2R_8435001 RC1_1-HE 750 chr2R 8435556 8435590 chr2R 8438994 8439028 8 3439 27.5 19.0 23.2 0.3 3472 chr2R 8435556 exon Lcp3 + chr2R 8437292 intergenic Lcp4 + chr2R 8439028 intergenic Cyp4ad1 - chr2R_8_8435001 chr2R_8435001 RC1_1-HE 751 chr2R 8483961 8483995 chr2R 8484038 8484072 16 76 1.5 2.5 2.0 5.3 111 chr2R 8483961 intron mtt - chr2R 8484016 intron mtt - chr2R 8484072 intron mtt - chr2R_16_8480001 chr2R_8480001 RC1_1-HE 752 chr2R 8524064 8524102 chr2R 8524147 8524185 19 83 4.0 4.0 4.0 3.8 121 chr2R 8524064 intron mtt - chr2R 8524124 intron mtt - chr2R 8524185 intron mtt - chr2R_19_8520001 chr2R_8520001 RC1_1-HE 753 chr2R 8526604 8526634 chr2R 8526703 8526733 15 98 4.5 3.5 4.0 3.0 129 chr2R 8526604 intron mtt - chr2R 8526668 intron mtt - chr2R 8526733 intron mtt - chr2R_15_8525001 chr2R_8525001 RC1_1-HE 754 chr2R 8536388 8536421 chr2R 8536642 8536675 8 254 3.0 1.5 2.2 2.5 287 chr2R 8536388 intergenic not near genes chr2R 8536532 intergenic not near genes chr2R 8536675 intergenic not near genes chr2R_8_8535001 chr2R_8535001 RC1_1-HE 755 chr2R 8546553 8546579 chr2R 8546766 8546792 7 213 7.0 4.0 5.5 1.1 239 chr2R 8546553 intergenic not near genes chr2R 8546672 intergenic not near genes chr2R 8546792 intergenic not near genes chr2R_7_8545001 chr2R_8545001 RC1_1-HE 756 chr2R 8560448 8560464 chr2R 8560661 8560677 4 213 4.5 8.5 6.5 0.5 229 chr2R 8560448 intergenic not near genes chr2R 8560562 intergenic not near genes chr2R 8560677 intergenic not near genes chr2R_4_8560001 chr2R_8560001 RC1_1-HE 757 chr2R 8569755 8569784 chr2R 8569865 8569893 11 110 1.5 6.0 3.8 2.3 138 chr2R 8569755 intergenic not near genes chr2R 8569824 intergenic not near genes chr2R 8569893 intergenic not near genes chr2R_11_8565001 chr2R_8565001 RC1_1-HE 758 chr2R 8595968 8595988 chr2R 8596047 8596067 4 79 5.0 8.5 6.8 0.5 99 chr2R 8595968 intergenic not near genes chr2R 8596018 intergenic not near genes chr2R 8596067 intergenic not near genes chr2R_4_8595001 chr2R_8595001 RC1_1-HE 759 chr2R 8612578 8612608 chr2R 8612656 8612686 23 78 10.5 7.0 8.8 2.3 108 chr2R 8612578 intron CG8642 - chr2R 8612632 intron CG8642 - chr2R 8612686 intron CG8642 - chr2R_23_8610001 chr2R_8610001 RC1_1-HE 760 chr2R 8691124 8691149 chr2R 8691594 8691619 8 470 1.5 5.5 3.5 1.8 495 chr2R 8691124 intergenic Jon44E + chr2R 8691372 intergenic Jon44E + chr2R 8691619 exon Jon44E + chr2R_8_8690001 chr2R_8690001 RC1_1-HE 761 chr2R 8692389 8692413 chr2R 8692467 8692491 7 78 4.0 2.5 3.2 1.7 102 chr2R 8692389 3` UTR Jon44E + chr2R 8692440 3` UTR Jon44E + chr2R 8692491 3` UTR Jon44E + chr2R_7_8690001 chr2R_8690001 RC1_1-HE 762 chr2R 8722764 8722791 chr2R 8723006 8723033 pogo 10 242 4.0 5.5 4.8 1.7 269 chr2R 8722764 intron CG14767 - chr2R 8722898 intron CG14767 - chr2R 8723033 intron CG14767 - chr2R_10_8720001 chr2R_8720001 RC1_1-HE 763 chr2R 8777930 8777944 chr2R 8784135 8784149 diver 7 6205 1.0 4.5 2.8 1.8 6219 chr2R 8777930 intergenic not near genes chr2R 8781040 intergenic not near genes chr2R 8784149 intergenic not near genes chr2R_7_8780001 chr2R_8780001 RC1_1-HE 764 chr2R 8849230 8849259 chr2R 8849309 8849338 11 79 6.0 2.5 4.2 2.1 108 chr2R 8849230 intron sns + chr2R 8849284 intron sns + chr2R 8849338 intron sns + chr2R_11_8845001 chr2R_8845001 RC1_1-HE 765 chr2R 8863185 8863213 chr2R 8863270 8863298 15 85 3.5 4.5 4.0 3.0 113 chr2R 8863185 intron RyR + chr2R 8863242 intron RyR + chr2R 8863298 intron RyR + chr2R_15_8860001 chr2R_8860001 RC1_1-HE 766 chr2R 8967430 8967684 chr2R 8967578 8967802 4 140 3.0 2.0 2.5 1.1 372 chr2R 8967430 intron CG8216 - chr2R 8967616 intron CG8216 - chr2R 8967802 intron CG8216 - chr2R_4_8965001 chr2R_8965001 RC1_1-HE 767 chr2R 8979580 8979594 chr2R 8979674 8979688 7 94 4.5 9.5 7.0 0.9 108 chr2R 8979580 intron CG8213 - chr2R 8979634 intron CG8213 - chr2R 8979688 intron CG8213 - chr2R_7_8975001 chr2R_8975001 RC1_1-HE 768 chr2R 8979595 8979608 chr2R 8979667 8979702 8 91 3.0 6.0 4.5 1.5 107 chr2R 8979595 intron CG8213 - chr2R 8979648 intron CG8213 - chr2R 8979702 intron CG8213 - chr2R_8_8975001 chr2R_8975001 RC1_1-HE 769 chr2R 9039006 9039042 chr2R 9039096 9039132 22 90 3.5 3.0 3.2 5.2 126 chr2R 9039006 intergenic not near genes chr2R 9039069 intergenic not near genes chr2R 9039132 intergenic not near genes chr2R_22_9035001 chr2R_9035001 RC1_1-HE 770 chr2R 9047420 9047438 chr2R 9047516 9047518 10 94 7.5 6.5 7.0 1.2 98 chr2R 9047420 intron CG13743 - chr2R 9047469 intron CG13743 - chr2R 9047518 intron CG13743 - chr2R_10_9045001 chr2R_9045001 RC1_1-HE 771 chr2R 9212692 9212724 chr2R 9213179 9213211 roo 14 487 7.0 4.5 5.8 2.1 519 chr2R 9212692 intergenic CR45309 + chr2R 9212952 intergenic CR45309 + chr2R 9213211 5` UTR CR45309 + chr2R_14_9210001 chr2R_9210001 RC1_1-HE 772 chr2R 9230225 9230241 chr2R 9230306 9230322 5 81 6.0 5.0 5.5 0.8 97 chr2R 9230225 intron hig - chr2R 9230274 intron hig - chr2R 9230322 exon hig - chr2R_5_9230001 chr2R_9230001 RC1_1-HE 773 chr2R 9236603 9236625 chr2R 9236691 9236713 23 88 6.0 4.0 5.0 3.8 110 chr2R 9236603 intron hig - chr2R 9236658 intron hig - chr2R 9236713 intron hig - chr2R_23_9235001 chr2R_9235001 RC1_1-HE 774 chr2R 9239806 9239843 chr2R 9239884 9239921 23 78 6.0 6.5 6.2 3.2 115 chr2R 9239806 intron,3` UTR hig -,Cyp4p2 + chr2R 9239864 intron hig - chr2R 9239921 intron hig - chr2R_23_9235001 chr2R_9235001 RC1_1-HE 775 chr2R 9321991 9322016 chr2R 9322070 9322095 14 79 1.0 17.5 9.2 1.4 104 chr2R 9321991 intron,intron CG13739 -,CG13954 - chr2R 9322043 intron,intron CG13739 -,CG13954 - chr2R 9322095 intron,intron CG13739 -,CG13954 - chr2R_14_9320001 chr2R_9320001 RC1_1-HE 776 chr2R 9388651 9388689 chr2R 9388739 9388777 22 88 7.0 5.5 6.2 3.1 126 chr2R 9388651 5` UTR CG13954 - chr2R 9388714 5` UTR CG13954 - chr2R 9388777 5` UTR CG13954 - chr2R_22_9385001 chr2R_9385001 RC1_1-HE 777 chr2R 9464899 9464917 chr2R 9464977 9464995 4 78 2.5 5.0 3.8 0.8 96 chr2R 9464899 intron Camta + chr2R 9464947 intron Camta + chr2R 9464995 intron Camta + chr2R_4_9460001 chr2R_9460001 RC1_1-HE 778 chr2R 9480073 9480107 chr2R 9490605 9490639 roo 11 10532 2.0 7.5 4.8 1.9 10566 chr2R 9480073 intergenic not near genes chr2R 9485356 intergenic not near genes chr2R 9490639 intergenic not near genes chr2R_11_9485001 chr2R_9485001 RC1_1-HE 779 chr2R 9499080 9499100 chr2R 9499160 9499174 18 79 8.5 17.0 12.8 1.3 94 chr2R 9499080 intron Wnt2 + chr2R 9499127 intron Wnt2 + chr2R 9499174 intron Wnt2 + chr2R_18_9495001 chr2R_9495001 RC1_1-HE 780 chr2R 9507041 9507056 chr2R 9507167 9507182 5 126 2.5 1.0 1.8 1.8 141 chr2R 9507041 intron brp + chr2R 9507112 intron brp + chr2R 9507182 intron brp + chr2R_5_9505001 chr2R_9505001 RC1_1-HE 781 chr2R 9509434 9509455 chr2R 9509519 9509540 10 83 9.0 18.0 13.5 0.7 106 chr2R 9509434 intron brp + chr2R 9509487 intron brp + chr2R 9509540 intron brp + chr2R_10_9505001 chr2R_9505001 RC1_1-HE 782 chr2R 9510665 9510698 chr2R 9510782 9510815 30 116 6.5 12.0 9.2 2.9 150 chr2R 9510665 intron brp + chr2R 9510740 intron brp + chr2R 9510815 intron brp + chr2R_30_9510001 chr2R_9510001 RC1_1-HE 783 chr2R 9547597 9547630 chr2R 9547675 9547708 7 78 3.0 2.5 2.8 1.8 111 chr2R 9547597 intergenic not near genes chr2R 9547652 intergenic not near genes chr2R 9547708 intergenic not near genes chr2R_7_9545001 chr2R_9545001 RC1_1-HE 784 chr2R 9561826 9561834 chr2R 9561915 9561923 5 89 1.0 0.5 0.8 2.8 97 chr2R 9561826 3` UTR,intron CR45281 -,CG1809 + chr2R 9561874 3` UTR,intron CR45281 -,CG1809 + chr2R 9561923 3` UTR,intron CR45281 -,CG1809 + chr2R_5_9560001 chr2R_9560001 RC1_1-HE 785 chr2R 9617777 9617802 chr2R 9618036 9618061 5 259 1.5 1.5 1.5 2.0 284 chr2R 9617777 intron Mmp2 - chr2R 9617919 intron Mmp2 - chr2R 9618061 intron Mmp2 - chr2R_5_9615001 chr2R_9615001 RC1_1-HE 786 chr2R 9703052 9703089 chr2R 9703133 9703170 18 81 1.5 2.0 1.8 6.4 118 chr2R 9703052 intergenic not near genes chr2R 9703111 intergenic not near genes chr2R 9703170 intergenic not near genes chr2R_18_9700001 chr2R_9700001 RC1_1-HE 787 chr2R 9726609 9726643 chr2R 9734161 9734195 17.6 10 7552 6.5 2.0 4.2 1.9 7586 chr2R 9726609 intron sqa - chr2R 9730402 intron sqa - chr2R 9734195 intron sqa - chr2R_10_9730001 chr2R_9730001 RC1_1-HE 788 chr2R 9755041 9755076 chr2R 9755175 9755209 12 134 3.5 6.0 4.8 2.1 168 chr2R 9755041 intron trpl + chr2R 9755125 intron trpl + chr2R 9755209 intron trpl + chr2R_12_9755001 chr2R_9755001 RC1_1-HE 789 chr2R 9790076 9790111 chr2R 9790154 9790189 17 78 6.0 8.0 7.0 2.1 113 chr2R 9790076 intron,5` UTR CG1688 -,CR44208 + chr2R 9790132 intron,5` UTR CG1688 -,CR44208 + chr2R 9790189 intron,5` UTR CG1688 -,CR44208 + chr2R_17_9790001 chr2R_9790001 RC1_1-HE 790 chr2R 9792354 9792386 chr2R 9792432 9792464 9 78 7.0 5.5 6.2 1.2 110 chr2R 9792354 intron CG1688 - chr2R 9792409 intron CG1688 - chr2R 9792464 intron CG1688 - chr2R_9_9790001 chr2R_9790001 RC1_1-HE 791 chr2R 9845539 9845573 chr2R 9845643 9845677 6 104 26.5 29.5 28.0 0.2 138 chr2R 9845539 3` UTR Orc6 - chr2R 9845608 exon Orc6 - chr2R 9845677 exon Orc6 - chr2R_6_9845001 chr2R_9845001 RC1_1-HE 792 chr2R 9945441 9945468 chr2R 9945638 9945665 BS 13 197 6.5 6.0 6.2 1.8 224 chr2R 9945441 intron Mef2 - chr2R 9945553 intron Mef2 - chr2R 9945665 intron Mef2 - chr2R_13_9945001 chr2R_9945001 RC1_1-HE 793 chr2R 9950296 9950327 chr2R 9950374 9950405 19 78 5.5 4.0 4.8 3.3 109 chr2R 9950296 intron Mef2 - chr2R 9950350 intron Mef2 - chr2R 9950405 intron Mef2 - chr2R_19_9950001 chr2R_9950001 RC1_1-HE 794 chr2R 9966960 9966986 chr2R 9967062 9967088 15 102 7.0 4.0 5.5 2.3 128 chr2R 9966960 intergenic CG12133 + chr2R 9967024 intergenic CG12133 + chr2R 9967088 intergenic CG12133 + chr2R_15_9965001 chr2R_9965001 RC1_1-HE 795 chr2R 10005845 10005880 chr2R 10007011 10007046 1360 19 1166 7.5 5.0 6.2 2.6 1201 chr2R 10005845 intron Pka-R2 - chr2R 10006446 intron Pka-R2 - chr2R 10007046 intron Pka-R2 - chr2R_19_10005001 chr2R_10005001 RC1_1-HE 796 chr2R 10022101 10022133 chr2R 10022186 10022218 4 85 2.5 2.0 2.2 1.2 117 chr2R 10022101 intron Pka-R2 - chr2R 10022160 intron Pka-R2 - chr2R 10022218 intron Pka-R2 - chr2R_4_10020001 chr2R_10020001 RC1_1-HE 797 chr2R 10047811 10047840 chr2R 10047895 10047923 7 84 1.5 1.5 1.5 2.8 112 chr2R 10047811 intron oys - chr2R 10047867 intron oys - chr2R 10047923 intron oys - chr2R_7_10045001 chr2R_10045001 RC1_1-HE 798 chr2R 10122740 10122751 chr2R 10122951 10122962 8 211 4.0 2.5 3.2 1.9 222 chr2R 10122740 intergenic Ccs - chr2R 10122851 intergenic Ccs - chr2R 10122962 intergenic Ccs - chr2R_8_10120001 chr2R_10120001 RC1_1-HE 799 chr2R 10160540 10160573 chr2R 10160629 10160656 16 89 5.5 6.0 5.8 2.4 116 chr2R 10160540 intron KCNQ - chr2R 10160598 intron KCNQ - chr2R 10160656 intron KCNQ - chr2R_16_10160001 chr2R_10160001 RC1_1-HE 800 chr2R 10164223 10164234 chr2R 10164307 10164321 12 87 11.0 0.0 5.5 1.8 98 chr2R 10164223 intron KCNQ - chr2R 10164272 intron KCNQ - chr2R 10164321 intron KCNQ - chr2R_12_10160001 chr2R_10160001 RC1_1-HE 801 chr2R 10175663 10175686 chr2R 10175747 10175770 11 84 7.5 11.0 9.2 1.1 107 chr2R 10175663 intron KCNQ - chr2R 10175716 intron KCNQ - chr2R 10175770 intron KCNQ - chr2R_11_10175001 chr2R_10175001 RC1_1-HE 802 chr2R 10176881 10176911 chr2R 10186049 10186079 roo 16 9167 8.0 5.0 6.5 2.1 9198 chr2R 10176881 intron KCNQ - chr2R 10181480 intron KCNQ - chr2R 10186079 intron KCNQ - chr2R_16_10180001 chr2R_10180001 RC1_1-HE 803 chr2R 10257155 10257191 chr2R 10257247 10257283 12 92 2.5 2.5 2.5 3.4 128 chr2R 10257155 intron CG12911 + chr2R 10257219 intron CG12911 + chr2R 10257283 intron CG12911 + chr2R_12_10255001 chr2R_10255001 RC1_1-HE 804 chr2R 10266498 10266531 chr2R 10266589 10266623 16 89 5.0 5.5 5.2 2.6 125 chr2R 10266498 intron CG12910 + chr2R 10266560 intron CG12910 + chr2R 10266623 intron CG12910 + chr2R_16_10265001 chr2R_10265001 RC1_1-HE 805 chr2R 10270571 10270602 chr2R 10270661 10270692 11 90 2.5 5.0 3.8 2.3 121 chr2R 10270571 intron CAP + chr2R 10270632 intron CAP + chr2R 10270692 intron CAP + chr2R_11_10270001 chr2R_10270001 RC1_1-HE 806 chr2R 10313311 10313337 chr2R 10313406 10313432 8 95 0.0 1.0 0.5 5.3 121 chr2R 10313311 intergenic not near genes chr2R 10313372 intergenic not near genes chr2R 10313432 intergenic Ndg + chr2R_8_10310001 chr2R_10310001 RC1_1-HE 807 chr2R 10318517 10318536 chr2R 10318604 10318623 5 87 1.5 1.0 1.2 2.3 106 chr2R 10318517 intron Ndg + chr2R 10318570 intron Ndg + chr2R 10318623 intron Ndg + chr2R_5_10315001 chr2R_10315001 RC1_1-HE 808 chr2R 10352734 10352774 chr2R 10352819 10352859 20 85 5.0 4.5 4.8 3.4 125 chr2R 10352734 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352796 intron,exon,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352859 intron,5` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R_20_10350001 chr2R_10350001 RC1_1-HE 809 chr2R 10370507 10370523 chr2R 10370651 10370667 9 144 4.0 3.0 3.5 2.0 160 chr2R 10370507 intron CG42732 - chr2R 10370587 intron CG42732 - chr2R 10370667 intron CG42732 - chr2R_9_10370001 chr2R_10370001 RC1_1-HE 810 chr2R 10376140 10376167 chr2R 10376490 10376516 8 350 1.0 4.0 2.5 2.3 376 chr2R 10376140 intron CG42732 - chr2R 10376328 intron CG42732 - chr2R 10376516 intron CG42732 - chr2R_8_10375001 chr2R_10375001 RC1_1-HE 811 chr2R 10391970 10391998 chr2R 10392061 10392089 7 91 3.0 3.0 3.0 1.8 119 chr2R 10391970 intron CG42732 - chr2R 10392030 intron CG42732 - chr2R 10392089 intron CG42732 - chr2R_7_10390001 chr2R_10390001 RC1_1-HE 812 chr2R 10409068 10409086 chr2R 10409145 10409163 8 77 1.5 3.5 2.5 2.3 95 chr2R 10409068 intron CG42732 - chr2R 10409116 intron CG42732 - chr2R 10409163 intron,exon CG42732 -,CG33477 - chr2R_8_10405001 chr2R_10405001 RC1_1-HE 813 chr2R 10469021 10469050 chr2R 10469148 10469177 12 127 1.5 2.0 1.8 4.3 156 chr2R 10469021 intron CG11777 + chr2R 10469099 intron CG11777 + chr2R 10469177 intron CG11777 + chr2R_12_10465001 chr2R_10465001 RC1_1-HE 814 chr2R 10480863 10480880 chr2R 10480944 10480961 5 81 5.5 2.5 4.0 1.0 98 chr2R 10480863 intron CG17765 + chr2R 10480912 intron CG17765 + chr2R 10480961 intron CG17765 + chr2R_5_10480001 chr2R_10480001 RC1_1-HE 815 chr2R 10549048 10549059 chr2R 10549152 10549163 11 104 0.0 6.0 3.0 2.8 115 chr2R 10549048 intergenic not near genes chr2R 10549106 intergenic not near genes chr2R 10549163 intergenic not near genes chr2R_11_10545001 chr2R_10545001 RC1_1-HE 816 chr2R 10574627 10574646 chr2R 10574710 10574729 16 83 8.5 6.0 7.2 2.0 102 chr2R 10574627 intron psq + chr2R 10574678 intron psq + chr2R 10574729 intron psq + chr2R_16_10570001 chr2R_10570001 RC1_1-HE 817 chr2R 10577465 10577496 chr2R 10577551 10577582 18 86 5.5 7.5 6.5 2.4 117 chr2R 10577465 intron psq + chr2R 10577524 intron psq + chr2R 10577582 intron psq + chr2R_18_10575001 chr2R_10575001 RC1_1-HE 818 chr2R 10582114 10582143 chr2R 10582210 10582239 15 96 5.0 0.0 2.5 4.3 125 chr2R 10582114 intron psq + chr2R 10582176 intron psq + chr2R 10582239 intron psq + chr2R_15_10580001 chr2R_10580001 RC1_1-HE 819 chr2R 10585127 10585149 chr2R 10585210 10585232 16 83 8.5 9.0 8.8 1.6 105 chr2R 10585127 intron psq + chr2R 10585180 intron psq + chr2R 10585232 intron psq + chr2R_16_10585001 chr2R_10585001 RC1_1-HE 820 chr2R 10585581 10585591 chr2R 10594160 10594175 Tirant 5 8583 2.5 4.5 3.5 1.1 8594 chr2R 10585581 intron psq + chr2R 10589878 intron psq + chr2R 10594175 intron psq + chr2R_5_10585001 chr2R_10585001 RC1_1-HE 821 chr2R 10605811 10605843 chr2R 10605895 10605927 15 82 2.5 3.0 2.8 3.9 116 chr2R 10605811 intron psq + chr2R 10605869 intron psq + chr2R 10605927 intron psq + chr2R_15_10605001 chr2R_10605001 RC1_1-HE 822 chr2R 10671276 10671293 chr2R 10671359 10671376 6 83 8.0 12.0 10.0 0.5 100 chr2R 10671276 intergenic not near genes chr2R 10671326 intergenic not near genes chr2R 10671376 intergenic not near genes chr2R_6_10670001 chr2R_10670001 RC1_1-HE 823 chr2R 10761554 10761590 chr2R 10761709 10761745 13 155 3.5 3.0 3.2 3.1 191 chr2R 10761554 intron,5` UTR CG33144 -,CR43605 + chr2R 10761650 intron,5` UTR CG33144 -,CR43605 + chr2R 10761745 intron CG33144 - chr2R_13_10760001 chr2R_10760001 RC1_1-HE 824 chr2R 10769352 10769367 chr2R 10769681 10769696 6 329 3.0 2.0 2.5 1.7 344 chr2R 10769352 intron CG33144 - chr2R 10769524 intron CG33144 - chr2R 10769696 intron CG33144 - chr2R_6_10765001 chr2R_10765001 RC1_1-HE 825 chr2R 10782958 10782985 chr2R 10783041 10783068 8 83 0.5 1.0 0.8 4.4 110 chr2R 10782958 intron,5` UTR CG33144 -,CR44299 + chr2R 10783013 intron,5` UTR CG33144 -,CR44299 + chr2R 10783068 intron,5` UTR CG33144 -,CR44299 + chr2R_8_10780001 chr2R_10780001 RC1_1-HE 826 chr2R 10804207 10804247 chr2R 10804288 10804328 21 81 6.5 6.5 6.5 2.8 121 chr2R 10804207 exon wde - chr2R 10804268 exon wde - chr2R 10804328 exon wde - chr2R_21_10800001 chr2R_10800001 RC1_1-HE 827 chr2R 10846627 10846645 chr2R 10846725 10846732 12 97 6.0 0.0 3.0 3.0 105 chr2R 10846627 intron CG30015 - chr2R 10846680 intron CG30015 - chr2R 10846732 intron CG30015 - chr2R_12_10845001 chr2R_10845001 RC1_1-HE 828 chr2R 10851185 10851217 chr2R 10851271 10851303 16 86 4.5 4.0 4.2 3.1 118 chr2R 10851185 intron CG30015 - chr2R 10851244 intron CG30015 - chr2R 10851303 intron CG30015 - chr2R_16_10850001 chr2R_10850001 RC1_1-HE 829 chr2R 10875638 10875651 chr2R 10875737 10875749 1360 4 99 3.5 1.5 2.5 1.1 111 chr2R 10875638 intergenic nclb +,CG30016 - chr2R 10875694 intergenic nclb +,CG30016 - chr2R 10875749 5` UTR nclb + chr2R_4_10875001 chr2R_10875001 RC1_1-HE 830 chr2R 10922778 10922790 chr2R 10922865 10922877 12 87 0.0 13.0 6.5 1.6 99 chr2R 10922778 intergenic not near genes chr2R 10922828 intergenic not near genes chr2R 10922877 intergenic not near genes chr2R_12_10920001 chr2R_10920001 RC1_1-HE 831 chr2R 10924551 10924565 chr2R 10924629 10924643 6 78 0.5 8.0 4.2 1.2 92 chr2R 10924551 intergenic not near genes chr2R 10924597 intergenic not near genes chr2R 10924643 intergenic not near genes chr2R_6_10920001 chr2R_10920001 RC1_1-HE 832 chr2R 10926375 10926388 chr2R 10926480 10926482 5 103 27.0 9.5 18.2 0.3 107 chr2R 10926375 intergenic not near genes chr2R 10926428 intergenic not near genes chr2R 10926482 intergenic not near genes chr2R_5_10925001 chr2R_10925001 RC1_1-HE 833 chr2R 10926389 10926409 chr2R 10926478 10926490 9 98 11.5 9.0 10.2 0.8 101 chr2R 10926389 intergenic not near genes chr2R 10926440 intergenic not near genes chr2R 10926490 intergenic not near genes chr2R_9_10925001 chr2R_10925001 RC1_1-HE 834 chr2R 10948025 10948061 chr2R 10955576 10955613 17.6 13 7552 0.5 3.0 1.8 4.6 7588 chr2R 10948025 intergenic not near genes chr2R 10951819 intergenic not near genes chr2R 10955613 intergenic not near genes chr2R_13_10950001 chr2R_10950001 RC1_1-HE 835 chr2R 10959093 10959112 chr2R 10959173 10959192 6 80 3.0 5.0 4.0 1.2 99 chr2R 10959093 intergenic not near genes chr2R 10959142 intergenic not near genes chr2R 10959192 intergenic not near genes chr2R_6_10955001 chr2R_10955001 RC1_1-HE 836 chr2R 10979662 10979681 chr2R 10980130 10980150 297 7 469 2.5 2.0 2.2 2.2 488 chr2R 10979662 intergenic not near genes chr2R 10979906 intergenic not near genes chr2R 10980150 intergenic not near genes chr2R_7_10975001 chr2R_10975001 RC1_1-HE 837 chr2R 11009814 11009845 chr2R 11018989 11019020 roo 8 9175 5.5 5.0 5.2 1.3 9206 chr2R 11009814 intron luna - chr2R 11014417 intron luna - chr2R 11019020 intron luna - chr2R_8_11010001 chr2R_11010001 RC1_1-HE 838 chr2R 11019887 11019908 chr2R 11024954 11024975 jockey 12 5066 4.5 5.5 5.0 2.0 5088 chr2R 11019887 intron luna - chr2R 11022431 intron luna - chr2R 11024975 intron luna - chr2R_12_11020001 chr2R_11020001 RC1_1-HE 839 chr2R 11102866 11102891 chr2R 11102949 11102974 13 83 5.0 0.0 2.5 3.7 108 chr2R 11102866 intron luna - chr2R 11102920 intron luna - chr2R 11102974 intron luna - chr2R_13_11100001 chr2R_11100001 RC1_1-HE 840 chr2R 11107307 11107317 chr2R 11107412 11107422 5 105 0.0 4.0 2.0 1.7 115 chr2R 11107307 intron luna - chr2R 11107364 intron luna - chr2R 11107422 intron luna - chr2R_5_11105001 chr2R_11105001 RC1_1-HE 841 chr2R 11118170 11118180 chr2R 11118248 11118258 7 78 0.5 6.5 3.5 1.6 88 chr2R 11118170 3` UTR Cyp12d1-p - chr2R 11118214 3` UTR Cyp12d1-p - chr2R 11118258 3` UTR Cyp12d1-p - chr2R_7_11115001 chr2R_11115001 RC1_1-HE 842 chr2R 11158862 11158890 chr2R 11159032 11159060 6 170 3.5 1.5 2.5 1.7 198 chr2R 11158862 intron CG13229 - chr2R 11158961 intron CG13229 - chr2R 11159060 intron CG13229 - chr2R_6_11155001 chr2R_11155001 RC1_1-HE 843 chr2R 11183336 11183352 chr2R 11183416 11183432 11 80 0.0 9.5 4.8 1.9 96 chr2R 11183336 intron shn + chr2R 11183384 intron shn + chr2R 11183432 intron shn + chr2R_11_11180001 chr2R_11180001 RC1_1-HE 844 chr2R 11207827 11207842 chr2R 11208020 11208035 BS 7 193 13.5 9.5 11.5 0.6 208 chr2R 11207827 intron shn + chr2R 11207931 intron shn + chr2R 11208035 intron shn + chr2R_7_11205001 chr2R_11205001 RC1_1-HE 845 chr2R 11207844 11207847 chr2R 11208006 11208040 BS 4 185 10.5 6.5 8.5 0.4 196 chr2R 11207844 intron shn + chr2R 11207942 intron shn + chr2R 11208040 intron shn + chr2R_4_11205001 chr2R_11205001 RC1_1-HE 846 chr2R 11249169 11249186 chr2R 11249296 11249313 8 127 6.5 0.5 3.5 1.8 144 chr2R 11249169 intergenic CG43112 + chr2R 11249241 intergenic CG43112 + chr2R 11249313 intergenic CG43112 + chr2R_8_11245001 chr2R_11245001 RC1_1-HE 847 chr2R 11297638 11297646 chr2R 11301960 11301968 flea 7 4322 4.5 3.5 4.0 1.4 4330 chr2R 11297638 intergenic CG42336 - chr2R 11299803 intergenic not near genes chr2R 11301968 5` UTR CG7741 + chr2R_7_11295001 chr2R_11295001 RC1_1-HE 848 chr2R 11332642 11332670 chr2R 11332724 11332752 11 82 2.5 2.0 2.2 3.4 110 chr2R 11332642 exon sha + chr2R 11332697 intron sha + chr2R 11332752 intron sha + chr2R_11_11330001 chr2R_11330001 RC1_1-HE 849 chr2R 11368029 11368060 chr2R 11368106 11368137 5 77 2.0 0.0 1.0 2.5 108 chr2R 11368029 intron CG13204 + chr2R 11368083 intron CG13204 + chr2R 11368137 intron CG13204 + chr2R_5_11365001 chr2R_11365001 RC1_1-HE 850 chr2R 11401512 11401536 chr2R 11401595 11401620 11 84 2.0 5.0 3.5 2.4 108 chr2R 11401512 intergenic not near genes chr2R 11401566 intergenic not near genes chr2R 11401620 intergenic not near genes chr2R_11_11400001 chr2R_11400001 RC1_1-HE 851 chr2R 11413196 11413227 chr2R 11413286 11413317 24 89 6.0 4.0 5.0 4.0 121 chr2R 11413196 intron Drip - chr2R 11413256 intron Drip - chr2R 11413317 intron Drip - chr2R_24_11410001 chr2R_11410001 RC1_1-HE 852 chr2R 11415522 11415551 chr2R 11418672 11418701 opus 11 3148 5.5 7.0 6.2 1.5 3179 chr2R 11415522 intron Drip - chr2R 11417112 intron Drip - chr2R 11418701 intron Drip - chr2R_11_11415001 chr2R_11415001 RC1_1-HE 853 chr2R 11430618 11430649 chr2R 11430701 11430736 21 85 3.5 3.5 3.5 4.7 118 chr2R 11430618 intergenic not near genes chr2R 11430677 intergenic not near genes chr2R 11430736 intergenic not near genes chr2R_21_11430001 chr2R_11430001 RC1_1-HE 854 chr2R 11472648 11472679 chr2R 11473846 11473877 pogo 9 1198 3.5 3.5 3.5 2.0 1229 chr2R 11472648 intergenic not near genes chr2R 11473262 intergenic not near genes chr2R 11473877 intergenic not near genes chr2R_9_11470001 chr2R_11470001 RC1_1-HE 855 chr2R 11480815 11480834 chr2R 11480899 11480918 9 84 0.0 2.0 1.0 4.5 103 chr2R 11480815 intron inv + chr2R 11480866 intron inv + chr2R 11480918 intron inv + chr2R_9_11480001 chr2R_11480001 RC1_1-HE 856 chr2R 11592225 11592247 chr2R 11592302 11592324 8 77 2.5 2.5 2.5 2.3 99 chr2R 11592225 intron tou - chr2R 11592274 intron tou - chr2R 11592324 intron tou - chr2R_8_11590001 chr2R_11590001 RC1_1-HE 857 chr2R 11614621 11614774 chr2R 11614710 11614864 8 89 8.0 5.5 6.8 1.0 243 chr2R 11614621 intron tou - chr2R 11614742 intron tou - chr2R 11614864 intron tou - chr2R_8_11610001 chr2R_11610001 RC1_1-HE 858 chr2R 11660366 11660400 chr2R 11660484 11660518 6 113 4.0 4.0 4.0 1.2 152 chr2R 11660366 intron Roc2 - chr2R 11660442 intron Roc2 - chr2R 11660518 intron Roc2 - chr2R_6_11660001 chr2R_11660001 RC1_1-HE 859 chr2R 11703819 11703849 chr2R 11703910 11703940 11 91 2.5 2.5 2.5 3.1 121 chr2R 11703819 intergenic not near genes chr2R 11703880 intergenic not near genes chr2R 11703940 intergenic not near genes chr2R_11_11700001 chr2R_11700001 RC1_1-HE 860 chr2R 11751196 11751227 chr2R 11751281 11751312 7 84 4.5 5.5 5.0 1.2 116 chr2R 11751196 intergenic not near genes chr2R 11751254 intergenic not near genes chr2R 11751312 intergenic not near genes chr2R_7_11750001 chr2R_11750001 RC1_1-HE 861 chr2R 11803381 11803421 chr2R 11803459 11803499 12 76 4.5 1.5 3.0 3.0 118 chr2R 11803381 intron ths + chr2R 11803440 intron ths + chr2R 11803499 intron ths + chr2R_12_11800001 chr2R_11800001 RC1_1-HE 862 chr2R 11848691 11848724 chr2R 11848775 11848808 7 84 1.0 1.5 1.2 3.2 117 chr2R 11848691 intron Sln + chr2R 11848750 intron Sln + chr2R 11848808 intron Sln + chr2R_7_11845001 chr2R_11845001 RC1_1-HE 863 chr2R 11909645 11909673 chr2R 11909771 11909799 12 126 22.5 21.5 22.0 0.5 154 chr2R 11909645 intron CG13183 - chr2R 11909722 intron CG13183 - chr2R 11909799 intron CG13183 - chr2R_12_11905001 chr2R_11905001 RC1_1-HE 864 chr2R 11913789 11913807 chr2R 11913984 11914002 6 195 1.5 5.5 3.5 1.3 213 chr2R 11913789 intergenic not near genes chr2R 11913896 intergenic not near genes chr2R 11914002 intergenic not near genes chr2R_6_11910001 chr2R_11910001 RC1_1-HE 865 chr2R 12042914 12042944 chr2R 12043092 12043130 9 184 1.0 2.5 1.8 3.2 216 chr2R 12042914 intergenic RpIII128 + chr2R 12043022 intergenic RpIII128 + chr2R 12043130 intergenic not near genes chr2R_9_12040001 chr2R_12040001 RC1_1-HE 866 chr2R 8518783 8518795 chr2R 12066176 12066210 7 3547396 5.5 7.0 6.2 1.0 3547427 chr2R 8518783 intron mtt - chr2R 10292496 intron CAP + chr2R 12066210 intron CG8888 - chr2R_7_10290001 chr2R_10290001 RC1_1-HE 867 chr2R 12104678 12104703 chr2R 12104759 12104777 23 80 5.5 7.0 6.2 3.2 99 chr2R 12104678 intron jeb - chr2R 12104728 intron jeb - chr2R 12104777 intron jeb - chr2R_23_12100001 chr2R_12100001 RC1_1-HE 868 chr2R 12112072 12112103 chr2R 12112471 12112503 7 400 0.0 1.0 0.5 4.7 431 chr2R 12112072 intron jeb - chr2R 12112288 intron jeb - chr2R 12112503 intron jeb - chr2R_7_12110001 chr2R_12110001 RC1_1-HE 869 chr2R 12186000 12186037 chr2R 12186096 12186131 12 96 3.0 2.0 2.5 3.4 131 chr2R 12186000 intron Cyp6g1 + chr2R 12186066 intron Cyp6g1 + chr2R 12186131 intron Cyp6g1 + chr2R_12_12185001 chr2R_12185001 RC1_1-HE 870 chr2R 12187471 12187509 chr2R 12190086 12190124 36 2616 62.5 35.5 49.0 0.7 2653 chr2R 12187471 exon Cyp6g1 + chr2R 12188798 exon Cyp6g2 - chr2R 12190124 exon Cyp6g2 - chr2R_36_12185001 chr2R_12185001 RC1_1-HE 871 chr2R 12217575 12217602 chr2R 12217656 12217684 14 82 3.0 3.5 3.2 3.3 109 chr2R 12217575 intergenic not near genes chr2R 12217630 intergenic not near genes chr2R 12217684 intergenic not near genes chr2R_14_12215001 chr2R_12215001 RC1_1-HE 872 chr2R 12235620 12235641 chr2R 12235698 12235719 5 78 5.0 2.0 3.5 1.1 99 chr2R 12235620 intergenic not near genes chr2R 12235670 intergenic not near genes chr2R 12235719 intergenic not near genes chr2R_5_12235001 chr2R_12235001 RC1_1-HE 873 chr2R 12481144 12481169 chr2R 12482938 12482974 roo 11 1801 2.5 1.5 2.0 3.7 1830 chr2R 12481144 exon Dh44-R2 + chr2R 12482059 intron Dh44-R2 + chr2R 12482974 intron Dh44-R2 + chr2R_11_12480001 chr2R_12480001 RC1_1-HE 874 chr2R 12492095 12492123 chr2R 12492182 12492210 12 85 3.0 4.5 3.8 2.5 115 chr2R 12492095 intron fdl - chr2R 12492152 intron fdl - chr2R 12492210 intron fdl - chr2R_12_12490001 chr2R_12490001 RC1_1-HE 875 chr2R 12501690 12501725 chr2R 12503853 12503888 Rt1c 5 2163 1.0 3.0 2.0 1.7 2198 chr2R 12501690 intron fdl - chr2R 12502789 intron fdl - chr2R 12503888 intron fdl - chr2R_5_12500001 chr2R_12500001 RC1_1-HE 876 chr2R 12525505 12525530 chr2R 12525599 12525606 6 91 6.0 0.0 3.0 1.5 101 chr2R 12525505 intergenic not near genes chr2R 12525556 intergenic not near genes chr2R 12525606 intergenic not near genes chr2R_6_12525001 chr2R_12525001 RC1_1-HE 877 chr2R 12625439 12625539 chr2R 12625519 12625618 5 79 0.5 0.0 0.2 4.2 179 chr2R 12625439 intergenic CG30054 +,CG17760 + chr2R 12625528 intergenic CG30054 +,CG17760 + chr2R 12625618 intergenic CG17760 +,CG30054 + chr2R_5_12625001 chr2R_12625001 RC1_1-HE 878 chr2R 12643607 12643819 chr2R 12643690 12643897 4 82 3.5 2.5 3.0 1.0 290 chr2R 12643607 intron CG8785 - chr2R 12643752 intron CG8785 - chr2R 12643897 exon CG8785 - chr2R_4_12640001 chr2R_12640001 RC1_1-HE 879 chr2R 12667523 12667545 chr2R 12667782 12667804 6 259 2.5 1.5 2.0 2.0 281 chr2R 12667523 intron nemy - chr2R 12667664 intron nemy - chr2R 12667804 intron nemy - chr2R_6_12665001 chr2R_12665001 RC1_1-HE 880 chr2R 12702319 12702336 chr2R 12702401 12702418 7 82 4.5 6.0 5.2 1.1 99 chr2R 12702319 intergenic not near genes chr2R 12702368 intergenic not near genes chr2R 12702418 intergenic not near genes chr2R_7_12700001 chr2R_12700001 RC1_1-HE 881 chr2R 12707519 12707545 chr2R 12715886 12715912 roo 13 8367 4.0 4.0 4.0 2.6 8393 chr2R 12707519 intron CG42663 + chr2R 12711716 intron CG42663 + chr2R 12715912 intron CG42663 + chr2R_13_12710001 chr2R_12710001 RC1_1-HE 882 chr2R 12777805 12777822 chr2R 12777915 12777932 11 109 0.0 0.0 0.0 11.0 127 chr2R 12777805 5` UTR CR45266 + chr2R 12777868 5` UTR CR45266 + chr2R 12777932 5` UTR CR45266 + chr2R_11_12775001 chr2R_12775001 RC1_1-HE 883 chr2R 12789294 12789308 chr2R 12797658 12797672 roo 10 8363 6.5 7.0 6.8 1.3 8378 chr2R 12789294 intron,3` UTR sca +,CR45137 - chr2R 12793483 intron,intron sca +,CR45137 - chr2R 12797672 intron,3` UTR sca +,CR45137 - chr2R_10_12790001 chr2R_12790001 RC1_1-HE 884 chr2R 12789309 12789325 chr2R 12797657 12797682 roo 8 8360 5.0 7.0 6.0 1.1 8373 chr2R 12789309 intron,3` UTR sca +,CR45137 - chr2R 12793496 intron,intron sca +,CR45137 - chr2R 12797682 intron,3` UTR sca +,CR45137 - chr2R_8_12790001 chr2R_12790001 RC1_1-HE 885 chr2R 12802142 12802167 chr2R 12802220 12802243 9 77 11.0 8.0 9.5 0.9 101 chr2R 12802142 intergenic sca + chr2R 12802192 intergenic sca + chr2R 12802243 intergenic sca + chr2R_9_12800001 chr2R_12800001 RC1_1-HE 886 chr2R 12807989 12808024 chr2R 12808068 12808103 16 79 4.5 3.5 4.0 3.2 114 chr2R 12807989 intergenic CG17580 + chr2R 12808046 intergenic CG17580 + chr2R 12808103 intergenic CG17580 + chr2R_16_12805001 chr2R_12805001 RC1_1-HE 887 chr2R 12819455 12819479 chr2R 12824528 12824553 jockey 9 5074 1.5 9.5 5.5 1.4 5098 chr2R 12819455 intergenic not near genes chr2R 12822004 intergenic not near genes chr2R 12824553 intergenic not near genes chr2R_9_12820001 chr2R_12820001 RC1_1-HE 888 chr2R 12833209 12833230 chr2R 12833287 12833308 10 78 0.5 0.0 0.2 8.3 99 chr2R 12833209 intergenic not near genes chr2R 12833258 intergenic not near genes chr2R 12833308 intergenic not near genes chr2R_10_12830001 chr2R_12830001 RC1_1-HE 889 chr2R 12897462 12897485 chr2R 12897554 12897577 10 92 3.5 3.5 3.5 2.2 115 chr2R 12897462 intron vg + chr2R 12897520 intron vg + chr2R 12897577 intron vg + chr2R_10_12895001 chr2R_12895001 RC1_1-HE 890 chr2R 12937227 12937258 chr2R 12937311 12937342 8 82 3.5 3.0 3.2 1.9 115 chr2R 12937227 intron Sans + chr2R 12937284 intron Sans + chr2R 12937342 intron Sans + chr2R_8_12935001 chr2R_12935001 RC1_1-HE 891 chr2R 12951658 12951693 chr2R 12951749 12951784 8 91 5.0 5.5 5.2 1.3 126 chr2R 12951658 intron,intron CG44251 -,CG44250 - chr2R 12951721 intron,intron CG44251 -,CG44250 - chr2R 12951784 intron,intron CG44251 -,CG44250 - chr2R_8_12950001 chr2R_12950001 RC1_1-HE 892 chr2R 12952841 12952845 chr2R 12952926 12952930 4 85 0.5 3.0 1.8 1.4 89 chr2R 12952841 intergenic CG13321 + chr2R 12952886 intergenic CG13321 + chr2R 12952930 intergenic CG13321 + chr2R_4_12950001 chr2R_12950001 RC1_1-HE 893 chr2R 13037688 13037700 chr2R 13037970 13037982 5 282 0.5 1.5 1.0 2.5 294 chr2R 13037688 intergenic not near genes chr2R 13037835 intergenic not near genes chr2R 13037982 intergenic not near genes chr2R_5_13035001 chr2R_13035001 RC1_1-HE 894 chr2R 13040071 13040085 chr2R 13040165 13040179 5 94 0.0 0.0 0.0 5.0 108 chr2R 13040071 intergenic not near genes chr2R 13040125 intergenic not near genes chr2R 13040179 intergenic not near genes chr2R_5_13040001 chr2R_13040001 RC1_1-HE 895 chr2R 13045291 13045305 chr2R 13046025 13046039 7 734 3.5 1.0 2.2 2.2 748 chr2R 13045291 3` UTR CG13323 - chr2R 13045665 3` UTR CG13323 - chr2R 13046039 3` UTR CG13323 - chr2R_7_13045001 chr2R_13045001 RC1_1-HE 896 chr2R 13129200 13129207 chr2R 13129279 13129286 4 79 6.0 2.0 4.0 0.8 86 chr2R 13129200 intergenic CG3955 -,CG13326 - chr2R 13129243 intergenic CG3955 -,CG13326 - chr2R 13129286 intergenic CG13326 -,CG3955 - chr2R_4_13125001 chr2R_13125001 RC1_1-HE 897 chr2R 13136835 13136863 chr2R 13141634 13141662 Doc 6 4799 2.5 3.5 3.0 1.5 4827 chr2R 13136835 exon Cap-G + chr2R 13139248 intron Cap-G + chr2R 13141662 intron Cap-G + chr2R_6_13135001 chr2R_13135001 RC1_1-HE 898 chr2R 13170718 13170744 chr2R 13170808 13170834 9 90 1.5 0.0 0.8 5.0 116 chr2R 13170718 3` UTR,3` UTR Spt-I +,CR45142 - chr2R 13170776 intergenic CR45142 -,Spt-I + chr2R 13170834 intergenic CR45142 -,Spt-I + chr2R_9_13170001 chr2R_13170001 RC1_1-HE 899 chr2R 13220536 13220566 chr2R 13220616 13220646 12 80 0.0 3.0 1.5 4.8 110 chr2R 13220536 intron CG17059 + chr2R 13220591 intron CG17059 + chr2R 13220646 intron CG17059 + chr2R_12_13220001 chr2R_13220001 RC1_1-HE 900 chr2R 13281347 13281382 chr2R 13281434 13281469 16 86 4.5 2.5 3.5 3.6 122 chr2R 13281347 intron Dh31-R - chr2R 13281408 intron Dh31-R - chr2R 13281469 intron Dh31-R - chr2R_16_13280001 chr2R_13280001 RC1_1-HE 901 chr2R 13309663 13309673 chr2R 13309782 13309792 4 119 3.5 0.5 2.0 1.3 129 chr2R 13309663 intergenic not near genes chr2R 13309728 intergenic not near genes chr2R 13309792 intergenic not near genes chr2R_4_13305001 chr2R_13305001 RC1_1-HE 902 chr2R 13468267 13468306 chr2R 13468344 13468383 24 76 1.5 5.5 3.5 5.3 116 chr2R 13468267 intron arr - chr2R 13468325 intron arr - chr2R 13468383 intron arr - chr2R_24_13465001 chr2R_13465001 RC1_1-HE 903 chr2R 13498716 13498748 chr2R 13498797 13498829 14 80 3.5 4.0 3.8 2.9 113 chr2R 13498716 intron drk - chr2R 13498772 intron drk - chr2R 13498829 intron drk - chr2R_14_13495001 chr2R_13495001 RC1_1-HE 904 chr2R 13536971 13537004 chr2R 13537055 13537088 16 84 2.5 5.0 3.8 3.3 117 chr2R 13536971 intergenic CG6145 - chr2R 13537030 intergenic CG6145 - chr2R 13537088 intergenic CG6145 - chr2R_16_13535001 chr2R_13535001 RC1_1-HE 905 chr2R 13580497 13580532 chr2R 13580848 13580883 jockey 6 351 0.0 1.0 0.5 4.0 386 chr2R 13580497 3` UTR CG6191 - chr2R 13580690 3` UTR,3` UTR CG6191 -,CG45088 - chr2R 13580883 3` UTR,3` UTR CG6191 -,CG45088 - chr2R_6_13580001 chr2R_13580001 RC1_1-HE 906 chr2R 13588556 13588590 chr2R 13588712 13588746 7 156 2.5 0.0 1.2 3.2 190 chr2R 13588556 intron,intron CG6191 -,CG45088 - chr2R 13588651 intron,intron CG6191 -,CG45088 - chr2R 13588746 intron,intron CG6191 -,CG45088 - chr2R_7_13585001 chr2R_13585001 RC1_1-HE 907 chr2R 13632432 13632460 chr2R 13632527 13632565 9 99 5.0 1.0 3.0 2.2 133 chr2R 13632432 intron fas + chr2R 13632498 intron fas + chr2R 13632565 intron fas + chr2R_9_13630001 chr2R_13630001 RC1_1-HE 908 chr2R 13700516 13700535 chr2R 13700593 13700613 6 78 1.0 4.5 2.8 1.6 97 chr2R 13700516 intron fas + chr2R 13700564 intron fas + chr2R 13700613 intron fas + chr2R_6_13700001 chr2R_13700001 RC1_1-HE 909 chr2R 13721207 13721228 chr2R 13721291 13721312 11 84 8.5 7.0 7.8 1.2 105 chr2R 13721207 intron fas + chr2R 13721260 intron fas + chr2R 13721312 intron fas + chr2R_11_13720001 chr2R_13720001 RC1_1-HE 910 chr2R 13728129 13728141 chr2R 13735790 13735802 opus 10 7661 5.5 4.5 5.0 1.7 7673 chr2R 13728129 intron fas + chr2R 13731966 intron fas + chr2R 13735802 intron fas + chr2R_10_13730001 chr2R_13730001 RC1_1-HE 911 chr2R 13738905 13738925 chr2R 13738996 13739017 4 92 0.5 0.5 0.5 2.7 112 chr2R 13738905 intron fas + chr2R 13738961 intron fas + chr2R 13739017 intron fas + chr2R_4_13735001 chr2R_13735001 RC1_1-HE 912 chr2R 13851883 13851915 chr2R 13851961 13851993 5 78 1.0 2.0 1.5 2.0 110 chr2R 13851883 exon CG30485 + chr2R 13851938 exon CG30485 + chr2R 13851993 exon CG30485 + chr2R_5_13850001 chr2R_13850001 RC1_1-HE 913 chr2R 13963509 13963543 chr2R 13963599 13963633 16 90 3.0 4.5 3.8 3.3 124 chr2R 13963509 intron Cp1 + chr2R 13963571 intron Cp1 + chr2R 13963633 intron Cp1 + chr2R_16_13960001 chr2R_13960001 RC1_1-HE 914 chr2R 13979626 13979651 chr2R 13979785 13979810 8 159 2.5 3.0 2.8 2.1 184 chr2R 13979626 5` UTR CG6701 - chr2R 13979718 5` UTR CG6701 - chr2R 13979810 5` UTR CG6701 - chr2R_8_13975001 chr2R_13975001 RC1_1-HE 915 chr2R 13986881 13986911 chr2R 13986971 13987001 17 90 6.5 5.5 6.0 2.4 120 chr2R 13986881 intron RN-tre - chr2R 13986941 intron RN-tre - chr2R 13987001 intron RN-tre - chr2R_17_13985001 chr2R_13985001 RC1_1-HE 916 chr2R 14021674 14021690 chr2R 14023971 14023987 4 2297 9.0 12.5 10.8 0.3 2313 chr2R 14021674 intron mam + chr2R 14022830 intron mam + chr2R 14023987 intron mam + chr2R_4_14020001 chr2R_14020001 RC1_1-HE 917 chr2R 14070862 14070873 chr2R 14070943 14070954 9 81 10.5 12.5 11.5 0.7 92 chr2R 14070862 intron Prosap - chr2R 14070908 intron Prosap - chr2R 14070954 intron Prosap - chr2R_9_14070001 chr2R_14070001 RC1_1-HE 918 chr2R 14394230 14394247 chr2R 14399020 14399037 Doc 10 4790 5.0 4.0 4.5 1.8 4807 chr2R 14394230 intergenic not near genes chr2R 14396634 intergenic not near genes chr2R 14399037 intergenic not near genes chr2R_10_14395001 chr2R_14395001 RC1_1-HE 919 chr2R 14399264 14399273 chr2R 14399487 14399496 7 223 0.5 4.0 2.2 2.2 232 chr2R 14399264 intergenic not near genes chr2R 14399380 intergenic not near genes chr2R 14399496 intergenic not near genes chr2R_7_14395001 chr2R_14395001 RC1_1-HE 920 chr2R 14467291 14467326 chr2R 14476444 14476448 roo 24 9152 2.0 6.0 4.0 4.8 9157 chr2R 14467291 intergenic not near genes chr2R 14471870 intergenic not near genes chr2R 14476448 5` UTR CR44462 + chr2R_24_14470001 chr2R_14470001 RC1_1-HE 921 chr2R 14497387 14497422 chr2R 14498554 14498563 1360 16 1165 3.5 8.5 6.0 2.3 1176 chr2R 14497387 3` UTR Cpsf160 - chr2R 14497975 intron Cpsf160 - chr2R 14498563 3` UTR Cpsf160 - chr2R_16_14495001 chr2R_14495001 RC1_1-HE 922 chr2R 14514491 14514496 chr2R 14514585 14514590 5 94 4.0 3.0 3.5 1.1 99 chr2R 14514491 intron,intron Cpr51A -,CG30197 + chr2R 14514540 intron,intron Cpr51A -,CG30197 + chr2R 14514590 intron,intron Cpr51A -,CG30197 + chr2R_5_14510001 chr2R_14510001 RC1_1-HE 923 chr2R 14518311 14518332 chr2R 14518405 14518426 7 94 3.0 4.0 3.5 1.6 115 chr2R 14518311 intergenic not near genes chr2R 14518368 intergenic not near genes chr2R 14518426 intergenic not near genes chr2R_7_14515001 chr2R_14515001 RC1_1-HE 924 chr2R 14566443 14566479 chr2R 14566531 14566567 24 88 6.0 8.5 7.2 2.9 124 chr2R 14566443 intron ttv + chr2R 14566505 intron ttv + chr2R 14566567 intron ttv + chr2R_24_14565001 chr2R_14565001 RC1_1-HE 925 chr2R 14707067 14707097 chr2R 14707148 14707178 10 81 1.0 3.5 2.2 3.1 111 chr2R 14707067 intron mspo - chr2R 14707122 intron mspo - chr2R 14707178 intron mspo - chr2R_10_14705001 chr2R_14705001 RC1_1-HE 926 chr2R 14728212 14728246 chr2R 14728296 14728330 8 84 2.5 1.0 1.8 2.9 118 chr2R 14728212 intergenic not near genes chr2R 14728271 intergenic not near genes chr2R 14728330 intergenic not near genes chr2R_8_14725001 chr2R_14725001 RC1_1-HE 927 chr2R 14740632 14740655 chr2R 14740710 14740732 10 78 7.5 0.5 4.0 2.0 100 chr2R 14740632 3` UTR CG12858 - chr2R 14740682 3` UTR CG12858 - chr2R 14740732 3` UTR CG12858 - chr2R_10_14740001 chr2R_14740001 RC1_1-HE 928 chr2R 14796339 14796361 chr2R 14796435 14796459 14 96 5.5 9.0 7.2 1.7 120 chr2R 14796339 intron kn - chr2R 14796399 intron kn - chr2R 14796459 intron kn - chr2R_14_14795001 chr2R_14795001 RC1_1-HE 929 chr2R 14830520 14830557 chr2R 14830600 14830637 16 80 6.0 2.0 4.0 3.2 117 chr2R 14830520 intergenic not near genes chr2R 14830578 intergenic not near genes chr2R 14830637 intergenic not near genes chr2R_16_14830001 chr2R_14830001 RC1_1-HE 930 chr2R 14842388 14842395 chr2R 14842485 14842492 5 97 2.0 4.0 3.0 1.2 104 chr2R 14842388 intergenic NaPi-T - chr2R 14842440 intergenic NaPi-T - chr2R 14842492 intergenic NaPi-T - chr2R_5_14840001 chr2R_14840001 RC1_1-HE 931 chr2R 14855033 14855065 chr2R 14855126 14855152 10 92 2.0 2.0 2.0 3.3 119 chr2R 14855033 5` UTR Ciao1 - chr2R 14855092 intergenic Ciao1 -,HPS1 + chr2R 14855152 intergenic Ciao1 -,HPS1 + chr2R_10_14855001 chr2R_14855001 RC1_1-HE 932 chr2R 14878530 14878565 chr2R 14878899 14878934 20 369 6.0 5.0 5.5 3.1 404 chr2R 14878530 exon Cyp6a19 + chr2R 14878732 exon Cyp6a19 + chr2R 14878934 intron Cyp6a19 + chr2R_20_14875001 chr2R_14875001 RC1_1-HE 933 chr2R 14882675 14882687 chr2R 14883062 14883090 6 394 9.5 7.0 8.2 0.7 415 chr2R 14882675 exon Cyp6a20 + chr2R 14882882 exon Cyp6a20 + chr2R 14883090 exon Cyp6a20 + chr2R_6_14880001 chr2R_14880001 RC1_1-HE 934 chr2R 14889210 14889235 chr2R 14897819 14897844 Max-element 10 8609 2.5 0.0 1.2 4.5 8634 chr2R 14889210 intergenic Cyp6a8 - chr2R 14893527 intergenic not near genes chr2R 14897844 intergenic not near genes chr2R_10_14890001 chr2R_14890001 RC1_1-HE 935 chr2R 14911699 14911727 chr2R 14911823 14911851 10 124 3.0 4.5 3.8 2.1 152 chr2R 14911699 intron CG10249 - chr2R 14911775 intron CG10249 - chr2R 14911851 intron CG10249 - chr2R_10_14910001 chr2R_14910001 RC1_1-HE 936 chr2R 14922141 14922174 chr2R 14922218 14922218 20 75 4.0 2.0 3.0 5.0 77 chr2R 14922141 intron CG10249 - chr2R 14922180 intron CG10249 - chr2R 14922218 intron CG10249 - chr2R_20_14920001 chr2R_14920001 RC1_1-HE 937 chr2R 14957664 14957676 chr2R 14957760 14957772 6 96 2.5 1.5 2.0 2.0 108 chr2R 14957664 intron aPKC - chr2R 14957718 intron aPKC - chr2R 14957772 intron aPKC - chr2R_6_14955001 chr2R_14955001 RC1_1-HE 938 chr2R 15015460 15015490 chr2R 15022883 15022915 mdg1 8 7425 4.0 4.0 4.0 1.6 7455 chr2R 15015460 intron hbs + chr2R 15019188 intron hbs + chr2R 15022915 intron hbs + chr2R_8_15015001 chr2R_15015001 RC1_1-HE 939 chr2R 15026305 15026336 chr2R 15026384 15026415 10 79 3.5 7.0 5.2 1.6 110 chr2R 15026305 intron hbs + chr2R 15026360 intron hbs + chr2R 15026415 intron hbs + chr2R_10_15025001 chr2R_15025001 RC1_1-HE 940 chr2R 15051081 15051110 chr2R 15051164 15051193 25 83 5.0 5.0 5.0 4.2 112 chr2R 15051081 intergenic not near genes chr2R 15051137 intergenic not near genes chr2R 15051193 intergenic not near genes chr2R_25_15050001 chr2R_15050001 RC1_1-HE 941 chr2R 15084987 15085006 chr2R 15092037 15092056 297 9 7050 5.0 5.5 5.2 1.5 7069 chr2R 15084987 intergenic not near genes chr2R 15088522 intergenic not near genes chr2R 15092056 5` UTR CR44457 + chr2R_9_15085001 chr2R_15085001 RC1_1-HE 942 chr2R 15092182 15092432 chr2R 15092260 15092523 17 90 5.5 15.5 10.5 1.5 341 chr2R 15092182 intron CR44457 + chr2R 15092352 5` UTR CR44457 + chr2R 15092523 intergenic CR44457 + chr2R_17_15090001 chr2R_15090001 RC1_1-HE 943 chr2R 15119315 15119351 chr2R 15127797 15127833 Tirant 16 8482 5.5 9.0 7.2 2.0 8518 chr2R 15119315 intron chn + chr2R 15123574 intron chn + chr2R 15127833 intron chn + chr2R_16_15120001 chr2R_15120001 RC1_1-HE 944 chr2R 15133476 15133505 chr2R 15133556 15133585 6 79 6.0 2.0 4.0 1.2 109 chr2R 15133476 intron chn + chr2R 15133530 intron chn + chr2R 15133585 intron chn + chr2R_6_15130001 chr2R_15130001 RC1_1-HE 945 chr2R 15158591 15158615 chr2R 15158688 15158712 8 97 4.0 4.5 4.2 1.5 121 chr2R 15158591 intron igl + chr2R 15158652 intron igl + chr2R 15158712 intron igl + chr2R_8_15155001 chr2R_15155001 RC1_1-HE 946 chr2R 15177632 15177661 chr2R 15177711 15177734 10 78 5.5 6.0 5.8 1.5 102 chr2R 15177632 intron igl + chr2R 15177683 intron igl + chr2R 15177734 intron igl + chr2R_10_15175001 chr2R_15175001 RC1_1-HE 947 chr2R 15196092 15196120 chr2R 15196189 15196217 7 97 5.0 0.5 2.8 1.8 125 chr2R 15196092 intergenic not near genes chr2R 15196154 intergenic not near genes chr2R 15196217 intergenic not near genes chr2R_7_15195001 chr2R_15195001 RC1_1-HE 948 chr2R 15252119 15252152 chr2R 15252197 15252230 11 78 3.0 1.5 2.2 3.4 111 chr2R 15252119 intron scb + chr2R 15252174 intron scb + chr2R 15252230 intron scb + chr2R_11_15250001 chr2R_15250001 RC1_1-HE 949 chr2R 15259067 15259093 chr2R 15259152 15259178 5 85 1.5 4.0 2.8 1.3 111 chr2R 15259067 intron ItgalphaPS4 + chr2R 15259122 intron ItgalphaPS4 + chr2R 15259178 intron ItgalphaPS4 + chr2R_5_15255001 chr2R_15255001 RC1_1-HE 950 chr2R 15302199 15302232 chr2R 15302318 15302351 19 119 4.0 2.0 3.0 4.8 152 chr2R 15302199 intron Trpm - chr2R 15302275 intron Trpm - chr2R 15302351 intron Trpm - chr2R_19_15300001 chr2R_15300001 RC1_1-HE 951 chr2R 15432473 15432505 chr2R 15432575 15432607 18 102 4.0 5.5 4.8 3.1 134 chr2R 15432473 intron CG43729 + chr2R 15432540 intron CG43729 + chr2R 15432607 intron CG43729 + chr2R_18_15430001 chr2R_15430001 RC1_1-HE 952 chr2R 15438691 15438711 chr2R 15438769 15438789 9 78 6.5 2.5 4.5 1.6 98 chr2R 15438691 intron CG43729 + chr2R 15438740 intron CG43729 + chr2R 15438789 intron CG43729 + chr2R_9_15435001 chr2R_15435001 RC1_1-HE 953 chr2R 15442621 15442654 chr2R 15442710 15442743 12 89 5.5 4.5 5.0 2.0 122 chr2R 15442621 intron CG43729 + chr2R 15442682 intron CG43729 + chr2R 15442743 intron CG43729 + chr2R_12_15440001 chr2R_15440001 RC1_1-HE 954 chr2R 15546739 15546755 chr2R 15546830 15546846 6 91 1.5 7.5 4.5 1.1 107 chr2R 15546739 intron CG8192 - chr2R 15546792 intron CG8192 - chr2R 15546846 intron CG8192 - chr2R_6_15545001 chr2R_15545001 RC1_1-HE 955 chr2R 15712701 15712713 chr2R 15712788 15712800 7 87 8.5 2.5 5.5 1.1 99 chr2R 15712701 intergenic CG30083 - chr2R 15712750 intergenic CG30083 - chr2R 15712800 intergenic CG30083 - chr2R_7_15710001 chr2R_15710001 RC1_1-HE 956 chr2R 15732992 15733025 chr2R 15733072 15733105 13 80 7.0 0.5 3.8 2.7 113 chr2R 15732992 intron CG30089 + chr2R 15733048 intron CG30089 + chr2R 15733105 intron CG30089 + chr2R_13_15730001 chr2R_15730001 RC1_1-HE 957 chr2R 15810382 15810406 chr2R 15810462 15810486 11 80 4.0 5.0 4.5 2.0 104 chr2R 15810382 intron,intron Zasp52 -,tun + chr2R 15810434 intron,intron Zasp52 -,tun + chr2R 15810486 intron,intron Zasp52 -,tun + chr2R_11_15810001 chr2R_15810001 RC1_1-HE 958 chr2R 15826525 15826546 chr2R 15826635 15826649 6 108 6.0 2.0 4.0 1.2 124 chr2R 15826525 intron tun + chr2R 15826587 intron tun + chr2R 15826649 intron tun + chr2R_6_15825001 chr2R_15825001 RC1_1-HE 959 chr2R 15848331 15848343 chr2R 15848409 15848421 4 78 1.5 1.5 1.5 1.6 90 chr2R 15848331 intron tun + chr2R 15848376 intron tun + chr2R 15848421 intron tun + chr2R_4_15845001 chr2R_15845001 RC1_1-HE 960 chr2R 15855936 15855966 chr2R 15857343 15857373 6 1407 1.5 2.0 1.8 2.1 1437 chr2R 15855936 intergenic CG12970 + chr2R 15856654 exon CG12970 + chr2R 15857373 exon CG12970 + chr2R_6_15855001 chr2R_15855001 RC1_1-HE 961 chr2R 16211413 16211430 chr2R 16211490 16211507 7 77 6.0 7.0 6.5 0.9 94 chr2R 16211413 intron mrj - chr2R 16211460 intron mrj - chr2R 16211507 intron mrj - chr2R_7_16210001 chr2R_16210001 RC1_1-HE 962 chr2R 16245415 16245426 chr2R 16245510 16245521 5 95 0.0 2.5 1.2 2.3 106 chr2R 16245415 intron CngA - chr2R 16245468 intron CngA - chr2R 16245521 intron CngA - chr2R_5_16245001 chr2R_16245001 RC1_1-HE 963 chr2R 16280391 16280419 chr2R 16280469 16280497 10 78 2.0 1.5 1.8 3.6 106 chr2R 16280391 3` UTR CG15704 + chr2R 16280444 3` UTR CG15704 + chr2R 16280497 intergenic CG15704 +,CG15705 + chr2R_10_16280001 chr2R_16280001 RC1_1-HE 964 chr2R 16357574 16357601 chr2R 16357664 16357691 9 90 2.0 4.0 3.0 2.2 117 chr2R 16357574 intergenic CR43416 + chr2R 16357632 intergenic CR43416 + chr2R 16357691 intergenic CR43416 + chr2R_9_16355001 chr2R_16355001 RC1_1-HE 965 chr2R 16436020 16436031 chr2R 16436100 16436111 4 80 1.5 0.0 0.8 2.2 91 chr2R 16436020 intergenic CG7848 - chr2R 16436066 intergenic CG7848 - chr2R 16436111 intergenic CG7848 - chr2R_4_16435001 chr2R_16435001 RC1_1-HE 966 chr2R 16496331 16496342 chr2R 16496413 16496424 6 82 9.0 0.0 4.5 1.1 93 chr2R 16496331 intergenic not near genes chr2R 16496378 intergenic not near genes chr2R 16496424 intergenic CG7813 - chr2R_6_16495001 chr2R_16495001 RC1_1-HE 967 chr2R 16503874 16503903 chr2R 16503965 16503994 17 91 5.0 2.5 3.8 3.5 120 chr2R 16503874 intron Sema-2a + chr2R 16503934 intron Sema-2a + chr2R 16503994 intron Sema-2a + chr2R_17_16500001 chr2R_16500001 RC1_1-HE 968 chr2R 16544852 16544865 chr2R 16544938 16544951 14 86 0.0 0.0 0.0 14.0 99 chr2R 16544852 intergenic not near genes chr2R 16544902 intergenic not near genes chr2R 16544951 intergenic not near genes chr2R_14_16540001 chr2R_16540001 RC1_1-HE 969 chr2R 16552102 16552114 chr2R 16552234 16552246 6 132 2.5 3.0 2.8 1.6 144 chr2R 16552102 intergenic Syn2 + chr2R 16552174 intergenic Syn2 + chr2R 16552246 intergenic Syn2 + chr2R_6_16550001 chr2R_16550001 RC1_1-HE 970 chr2R 16553838 16553871 chr2R 16553947 16553980 21 108 5.5 8.0 6.8 2.7 142 chr2R 16553838 intron Syn2 + chr2R 16553909 intron Syn2 + chr2R 16553980 intron Syn2 + chr2R_21_16550001 chr2R_16550001 RC1_1-HE 971 chr2R 16701728 16701738 chr2R 16701837 16701846 4 109 0.5 0.0 0.2 3.3 118 chr2R 16701728 intron CG30463 - chr2R 16701787 intron CG30463 - chr2R 16701846 intron CG30463 - chr2R_4_16700001 chr2R_16700001 RC1_1-HE 972 chr2R 16723931 16723950 chr2R 16724012 16724031 7 81 1.0 2.5 1.8 2.5 100 chr2R 16723931 intron CG30463 - chr2R 16723981 intron CG30463 - chr2R 16724031 intron CG30463 - chr2R_7_16720001 chr2R_16720001 RC1_1-HE 973 chr2R 16867761 16867789 chr2R 16867892 16867920 4 131 3.5 3.0 3.2 1.0 159 chr2R 16867761 intergenic Psi -,Ef1beta + chr2R 16867840 intergenic Psi -,Ef1beta + chr2R 16867920 intergenic Psi -,Ef1beta + chr2R_4_16865001 chr2R_16865001 RC1_1-HE 974 chr2R 16885932 16885960 chr2R 16886010 16886038 6 78 2.0 3.0 2.5 1.7 106 chr2R 16885932 intron CG8910 - chr2R 16885985 intron CG8910 - chr2R 16886038 intron CG8910 - chr2R_6_16885001 chr2R_16885001 RC1_1-HE 975 chr2R 16916407 16916429 chr2R 16916515 16916537 10 108 0.0 2.5 1.2 4.5 130 chr2R 16916407 intergenic not near genes chr2R 16916472 intergenic not near genes chr2R 16916537 intergenic not near genes chr2R_10_16915001 chr2R_16915001 RC1_1-HE 976 chr2R 16918234 16918258 chr2R 16918312 16918335 14 78 5.5 3.5 4.5 2.5 101 chr2R 16918234 intergenic not near genes chr2R 16918284 intergenic not near genes chr2R 16918335 intergenic not near genes chr2R_14_16915001 chr2R_16915001 RC1_1-HE 977 chr2R 16933844 16933876 chr2R 16933924 16933956 17 80 3.0 6.0 4.5 3.1 112 chr2R 16933844 intron Pkc53E + chr2R 16933900 intron Pkc53E + chr2R 16933956 intron Pkc53E + chr2R_17_16930001 chr2R_16930001 RC1_1-HE 978 chr2R 16971987 16972010 chr2R 16972113 16972136 13 126 2.0 2.0 2.0 4.3 149 chr2R 16971987 intergenic CR44377 + chr2R 16972062 intergenic CR44377 + chr2R 16972136 intergenic CR44377 + chr2R_13_16970001 chr2R_16970001 RC1_1-HE 979 chr2R 16978479 16978513 chr2R 16978567 16978601 8 88 3.5 5.0 4.2 1.5 122 chr2R 16978479 intron Cbp53E + chr2R 16978540 intron Cbp53E + chr2R 16978601 intron Cbp53E + chr2R_8_16975001 chr2R_16975001 RC1_1-HE 980 chr2R 16981960 16982097 chr2R 16982074 16982176 14 94 0.5 0.0 0.2 11.7 216 chr2R 16981960 intron Cbp53E + chr2R 16982068 intron Cbp53E + chr2R 16982176 intron Cbp53E + chr2R_14_16980001 chr2R_16980001 RC1_1-HE 981 chr2R 16982766 16982806 chr2R 16982843 16982883 22 77 4.5 3.0 3.8 4.6 117 chr2R 16982766 intron Cbp53E + chr2R 16982824 intron Cbp53E + chr2R 16982883 intron Cbp53E + chr2R_22_16980001 chr2R_16980001 RC1_1-HE 982 chr2R 16989143 16989177 chr2R 16989221 16989255 18 78 1.5 3.5 2.5 5.1 112 chr2R 16989143 intron Cbp53E + chr2R 16989199 intron Cbp53E + chr2R 16989255 intron Cbp53E + chr2R_18_16985001 chr2R_16985001 RC1_1-HE 983 chr2R 17074897 17074918 chr2R 17074993 17075014 14 96 4.5 3.5 4.0 2.8 117 chr2R 17074897 intron CG30460 - chr2R 17074956 intron CG30460 - chr2R 17075014 intron CG30460 - chr2R_14_17070001 chr2R_17070001 RC1_1-HE 984 chr2R 17081907 17081943 chr2R 17081990 17082026 4 83 2.5 0.0 1.2 1.8 119 chr2R 17081907 intron CG30460 - chr2R 17081966 intron CG30460 - chr2R 17082026 intron CG30460 - chr2R_4_17080001 chr2R_17080001 RC1_1-HE 985 chr2R 17098653 17098663 chr2R 17098743 17098753 5 90 12.0 6.5 9.2 0.5 100 chr2R 17098653 intergenic GstS1 - chr2R 17098703 intergenic GstS1 - chr2R 17098753 intergenic GstS1 - chr2R_5_17095001 chr2R_17095001 RC1_1-HE 986 chr2R 17132853 17132864 chr2R 17132954 17132965 4 101 0.0 0.5 0.2 3.3 112 chr2R 17132853 intergenic not near genes chr2R 17132909 intergenic not near genes chr2R 17132965 intergenic Acp54A1 + chr2R_4_17130001 chr2R_17130001 RC1_1-HE 987 chr2R 17206748 17206752 chr2R 17206825 17206829 4 77 0.0 7.5 3.8 0.8 81 chr2R 17206748 intergenic not near genes chr2R 17206788 intergenic not near genes chr2R 17206829 intergenic not near genes chr2R_4_17205001 chr2R_17205001 RC1_1-HE 988 chr2R 17236505 17236540 chr2R 17241710 17241745 copia 14 5203 4.0 4.0 4.0 2.8 5240 chr2R 17236505 intron mbl + chr2R 17239125 intron mbl + chr2R 17241745 intron mbl + chr2R_14_17235001 chr2R_17235001 RC1_1-HE 989 chr2R 17255993 17256003 chr2R 17256072 17256082 6 79 8.0 7.5 7.8 0.7 89 chr2R 17255993 intron mbl + chr2R 17256038 intron mbl + chr2R 17256082 intron mbl + chr2R_6_17255001 chr2R_17255001 RC1_1-HE 990 chr2R 17256004 17256023 chr2R 17256069 17256102 14 78 5.0 6.5 5.8 2.1 98 chr2R 17256004 intron mbl + chr2R 17256053 intron mbl + chr2R 17256102 intron mbl + chr2R_14_17255001 chr2R_17255001 RC1_1-HE 991 chr2R 17322799 17322826 chr2R 17323010 17323037 20 211 8.5 9.0 8.8 2.0 238 chr2R 17322799 intron mbl + chr2R 17322918 intron mbl + chr2R 17323037 intron mbl + chr2R_20_17320001 chr2R_17320001 RC1_1-HE 992 chr2R 17346981 17347017 chr2R 17347059 17347095 12 78 7.0 4.5 5.8 1.8 114 chr2R 17346981 intron mbl + chr2R 17347038 intron mbl + chr2R 17347095 intron mbl + chr2R_12_17345001 chr2R_17345001 RC1_1-HE 993 chr2R 17395280 17395312 chr2R 17395359 17395401 5 87 2.0 0.5 1.2 2.3 121 chr2R 17395280 intron Sip1 + chr2R 17395340 intron Sip1 + chr2R 17395401 intron Sip1 + chr2R_5_17395001 chr2R_17395001 RC1_1-HE 994 chr2R 17443784 17443802 chr2R 17443861 17443879 8 77 1.5 6.5 4.0 1.6 95 chr2R 17443784 intron EDTP - chr2R 17443832 intron EDTP - chr2R 17443879 intron EDTP - chr2R_8_17440001 chr2R_17440001 RC1_1-HE 995 chr2R 17451179 17451184 chr2R 17451263 17451268 4 84 4.0 4.5 4.2 0.8 89 chr2R 17451179 intron mthl3 - chr2R 17451224 intron mthl3 - chr2R 17451268 intron mthl3 - chr2R_4_17450001 chr2R_17450001 RC1_1-HE 996 chr2R 17460548 17460572 chr2R 17460625 17460650 11 78 9.5 5.5 7.5 1.3 102 chr2R 17460548 intron CG14478 + chr2R 17460599 intron CG14478 + chr2R 17460650 intron CG14478 + chr2R_11_17460001 chr2R_17460001 RC1_1-HE 997 chr2R 17470341 17470352 chr2R 17470426 17470437 6 85 2.0 4.0 3.0 1.5 96 chr2R 17470341 intron qkr54B + chr2R 17470389 intron qkr54B + chr2R 17470437 intron qkr54B + chr2R_6_17470001 chr2R_17470001 RC1_1-HE 998 chr2R 17500674 17500691 chr2R 17500751 17500768 9 77 0.0 8.0 4.0 1.8 94 chr2R 17500674 intergenic not near genes chr2R 17500721 intergenic not near genes chr2R 17500768 intergenic not near genes chr2R_9_17500001 chr2R_17500001 RC1_1-HE 999 chr2R 17505996 17506021 chr2R 17506073 17506098 8 77 3.5 4.0 3.8 1.7 102 chr2R 17505996 exon CG43164 + chr2R 17506047 intron CG43164 + chr2R 17506098 intron CG43164 + chr2R_8_17505001 chr2R_17505001 RC1_1-HE 1000 chr2R 17507042 17507052 chr2R 17507118 17507129 5 77 2.5 0.5 1.5 2.0 87 chr2R 17507042 intron CG43164 + chr2R 17507086 intron CG43164 + chr2R 17507129 intron CG43164 + chr2R_5_17505001 chr2R_17505001 RC1_1-HE 1001 chr2R 17629604 17629618 chr2R 17629684 17629698 7 80 3.5 2.0 2.8 1.8 94 chr2R 17629604 intron,intron CG10936 -,rhi - chr2R 17629651 intron,intron CG10936 -,rhi - chr2R 17629698 intron,intron CG10936 -,rhi - chr2R_7_17625001 chr2R_17625001 RC1_1-HE 1002 chr2R 17743347 17743375 chr2R 17743444 17743472 8 96 4.5 3.5 4.0 1.6 125 chr2R 17743347 exon CG4996 + chr2R 17743410 exon CG4996 + chr2R 17743472 3` UTR CG4996 + chr2R_8_17740001 chr2R_17740001 RC1_1-HE 1003 chr2R 17782361 17782386 chr2R 17783565 17783590 pogo 9 1204 3.0 4.0 3.5 2.0 1229 chr2R 17782361 intergenic CG33981 -,fab1 - chr2R 17782976 intergenic not near genes chr2R 17783590 intergenic mir-31a - chr2R_9_17780001 chr2R_17780001 RC1_1-HE 1004 chr2R 17784024 17784057 chr2R 17784266 17784299 pogo 16 242 5.5 6.5 6.0 2.3 275 chr2R 17784024 intergenic mir-31a - chr2R 17784162 intergenic mir-31a - chr2R 17784299 intergenic mir-31a - chr2R_16_17780001 chr2R_17780001 RC1_1-HE 1005 chr2R 17821733 17821742 chr2R 17821816 17821825 6 83 4.0 8.5 6.2 0.8 92 chr2R 17821733 intron grh + chr2R 17821779 intron grh + chr2R 17821825 intron grh + chr2R_6_17820001 chr2R_17820001 RC1_1-HE 1006 chr2R 17900719 17900752 chr2R 17900799 17900832 18 80 3.5 7.0 5.2 2.9 113 chr2R 17900719 intron Elk + chr2R 17900776 intron Elk + chr2R 17900832 intron Elk + chr2R_18_17900001 chr2R_17900001 RC1_1-HE 1007 chr2R 17911756 17911791 chr2R 17911862 17911897 13 105 0.0 1.5 0.8 7.2 141 chr2R 17911756 intron Elk + chr2R 17911826 intron Elk + chr2R 17911897 intron Elk + chr2R_13_17910001 chr2R_17910001 RC1_1-HE 1008 chr2R 17922676 17922710 chr2R 17922804 17922817 16 127 1.5 7.5 4.5 2.9 141 chr2R 17922676 intron Elk + chr2R 17922746 intron Elk + chr2R 17922817 intron Elk + chr2R_16_17920001 chr2R_17920001 RC1_1-HE 1009 chr2R 17964468 17964492 chr2R 17964569 17964593 13 101 5.0 3.5 4.2 2.5 125 chr2R 17964468 intergenic not near genes chr2R 17964530 intergenic not near genes chr2R 17964593 intergenic not near genes chr2R_13_17960001 chr2R_17960001 RC1_1-HE 1010 chr2R 17974761 17974766 chr2R 17974839 17974844 5 78 12.5 7.5 10.0 0.5 83 chr2R 17974761 intergenic dpr13 - chr2R 17974802 intergenic dpr13 - chr2R 17974844 intergenic dpr13 - chr2R_5_17970001 chr2R_17970001 RC1_1-HE 1011 chr2R 17982926 17982948 chr2R 17983012 17983034 10 86 3.5 4.0 3.8 2.1 108 chr2R 17982926 intron dpr13 - chr2R 17982980 intron dpr13 - chr2R 17983034 intron dpr13 - chr2R_10_17980001 chr2R_17980001 RC1_1-HE 1012 chr2R 18003222 18003228 chr2R 18003300 18003306 5 78 15.0 17.0 16.0 0.3 84 chr2R 18003222 intron dpr13 - chr2R 18003264 intron dpr13 - chr2R 18003306 intron dpr13 - chr2R_5_18000001 chr2R_18000001 RC1_1-HE 1013 chr2R 18013951 18013966 chr2R 18014031 18014046 6 80 2.5 5.0 3.8 1.2 95 chr2R 18013951 intergenic not near genes chr2R 18013998 intergenic not near genes chr2R 18014046 intergenic not near genes chr2R_6_18010001 chr2R_18010001 RC1_1-HE 1014 chr2R 18074601 18074620 chr2R 18074678 18074697 4 77 4.0 4.5 4.2 0.8 96 chr2R 18074601 intron CG34386 + chr2R 18074649 intron CG34386 + chr2R 18074697 intron CG34386 + chr2R_4_18070001 chr2R_18070001 RC1_1-HE 1015 chr2R 18075969 18076000 chr2R 18076064 18076095 18 95 5.5 4.0 4.8 3.1 126 chr2R 18075969 intron CG34386 + chr2R 18076032 intron CG34386 + chr2R 18076095 intron CG34386 + chr2R_18_18075001 chr2R_18075001 RC1_1-HE 1016 chr2R 18091634 18091673 chr2R 18091712 18091752 20 79 5.5 8.0 6.8 2.6 118 chr2R 18091634 intron CG34386 + chr2R 18091693 intron CG34386 + chr2R 18091752 intron CG34386 + chr2R_20_18090001 chr2R_18090001 RC1_1-HE 1017 chr2R 18111692 18111716 chr2R 18115561 18115585 F-element 10 3869 3.0 7.5 5.2 1.6 3893 chr2R 18111692 intergenic not near genes chr2R 18113638 intergenic not near genes chr2R 18115585 intergenic not near genes chr2R_10_18110001 chr2R_18110001 RC1_1-HE 1018 chr2R 18174893 18174926 chr2R 18174980 18175013 11 87 2.5 1.0 1.8 3.9 120 chr2R 18174893 3` UTR CG10916 + chr2R 18174953 3` UTR CG10916 + chr2R 18175013 3` UTR CG10916 + chr2R_11_18170001 chr2R_18170001 RC1_1-HE 1019 chr2R 18197074 18197091 chr2R 18197153 18197170 6 79 3.5 3.0 3.2 1.4 96 chr2R 18197074 intergenic not near genes chr2R 18197122 intergenic not near genes chr2R 18197170 intergenic not near genes chr2R_6_18195001 chr2R_18195001 RC1_1-HE 1020 chr2R 18255695 18255705 chr2R 18255910 18255920 6 215 6.5 0.5 3.5 1.3 225 chr2R 18255695 intergenic not near genes chr2R 18255808 intergenic not near genes chr2R 18255920 intergenic not near genes chr2R_6_18255001 chr2R_18255001 RC1_1-HE 1021 chr2R 18260544 18260574 chr2R 18260626 18260656 9 82 6.0 6.0 6.0 1.3 112 chr2R 18260544 intergenic not near genes chr2R 18260600 intergenic not near genes chr2R 18260656 intergenic not near genes chr2R_9_18260001 chr2R_18260001 RC1_1-HE 1022 chr2R 18312828 18312849 chr2R 18312925 18312929 4 93 2.0 0.5 1.2 1.8 101 chr2R 18312828 intron sbb - chr2R 18312878 intron sbb - chr2R 18312929 intron sbb - chr2R_4_18310001 chr2R_18310001 RC1_1-HE 1023 chr2R 18358387 18358425 chr2R 18372600 18372639 roo 12 14213 5.5 2.0 3.8 2.5 14252 chr2R 18358387 intergenic not near genes chr2R 18365513 intergenic not near genes chr2R 18372639 intergenic not near genes chr2R_12_18365001 chr2R_18365001 RC1_1-HE 1024 chr2R 18391969 18391996 chr2R 18392051 18392078 9 82 1.0 0.5 0.8 5.0 109 chr2R 18391969 intergenic not near genes chr2R 18392024 intergenic not near genes chr2R 18392078 intergenic not near genes chr2R_9_18390001 chr2R_18390001 RC1_1-HE 1025 chr2R 18396091 18396119 chr2R 18396174 18396178 7 77 1.0 1.0 1.0 3.5 87 chr2R 18396091 intergenic not near genes chr2R 18396134 intergenic not near genes chr2R 18396178 intergenic GstE10 - chr2R_7_18395001 chr2R_18395001 RC1_1-HE 1026 chr2R 18401660 18401670 chr2R 18401744 18401770 9 98 0.5 7.5 4.0 1.8 110 chr2R 18401660 intergenic GstE3 + chr2R 18401715 intergenic GstE3 + chr2R 18401770 intergenic GstE3 + chr2R_9_18400001 chr2R_18400001 RC1_1-HE 1027 chr2R 18401890 18401904 chr2R 18402244 18402258 4 354 1.0 4.0 2.5 1.1 368 chr2R 18401890 intergenic GstE3 + chr2R 18402074 intergenic not near genes chr2R 18402258 intergenic not near genes chr2R_4_18400001 chr2R_18400001 RC1_1-HE 1028 chr2R 18432202 18432235 chr2R 18432285 18432311 7 82 2.0 3.0 2.5 2.0 109 chr2R 18432202 intron CG30118 - chr2R 18432256 intron CG30118 - chr2R 18432311 intron CG30118 - chr2R_7_18430001 chr2R_18430001 RC1_1-HE 1029 chr2R 18455070 18455087 chr2R 18455153 18455170 5 83 2.0 3.5 2.8 1.3 100 chr2R 18455070 intergenic not near genes chr2R 18455120 intergenic not near genes chr2R 18455170 intergenic not near genes chr2R_5_18455001 chr2R_18455001 RC1_1-HE 1030 chr2R 18531137 18531169 chr2R 18531219 18531251 16 81 3.0 2.5 2.8 4.2 114 chr2R 18531137 intron CG10924 + chr2R 18531194 intron CG10924 + chr2R 18531251 intron CG10924 + chr2R_16_18530001 chr2R_18530001 RC1_1-HE 1031 chr2R 18558694 18558714 chr2R 18558888 18558896 8 192 12.0 0.5 6.2 1.1 202 chr2R 18558694 intron GEFmeso - chr2R 18558795 intron GEFmeso - chr2R 18558896 intron GEFmeso - chr2R_8_18555001 chr2R_18555001 RC1_1-HE 1032 chr2R 18575798 18575810 chr2R 18581987 18581998 3S18 5 6186 5.5 3.5 4.5 0.9 6200 chr2R 18575798 intron GEFmeso - chr2R 18578898 intron GEFmeso - chr2R 18581998 intron GEFmeso - chr2R_5_18575001 chr2R_18575001 RC1_1-HE 1033 chr2R 18575811 18575828 chr2R 18581983 18582017 3S18 13 6179 3.0 3.5 3.2 3.1 6206 chr2R 18575811 intron GEFmeso - chr2R 18578914 intron GEFmeso - chr2R 18582017 intron GEFmeso - chr2R_13_18575001 chr2R_18575001 RC1_1-HE 1034 chr2R 18590867 18590901 chr2R 18600020 18600054 roo 14 9153 5.5 1.5 3.5 3.1 9187 chr2R 18590867 intron GEFmeso - chr2R 18595460 intron GEFmeso - chr2R 18600054 intron GEFmeso - chr2R_14_18595001 chr2R_18595001 RC1_1-HE 1035 chr2R 18646412 18646563 chr2R 18646558 18646642 6 112 0.0 0.0 0.0 6.0 230 chr2R 18646412 intron SP2637 - chr2R 18646527 intron SP2637 - chr2R 18646642 intron SP2637 - chr2R_6_18645001 chr2R_18645001 RC1_1-HE 1036 chr2R 18673071 18673105 chr2R 18673151 18673185 20 80 5.0 2.5 3.8 4.2 114 chr2R 18673071 5` UTR edl - chr2R 18673128 5` UTR edl - chr2R 18673185 5` UTR edl - chr2R_20_18670001 chr2R_18670001 RC1_1-HE 1037 chr2R 18765253 18765279 chr2R 18765331 18765376 4 88 7.0 0.5 3.8 0.8 123 chr2R 18765253 intron Mctp + chr2R 18765314 intron Mctp + chr2R 18765376 intron Mctp + chr2R_4_18765001 chr2R_18765001 RC1_1-HE 1038 chr2R 18782379 18782416 chr2R 18782478 18782515 13 99 0.0 3.0 1.5 5.2 136 chr2R 18782379 intergenic not near genes chr2R 18782447 intergenic not near genes chr2R 18782515 intergenic not near genes chr2R_13_18780001 chr2R_18780001 RC1_1-HE 1039 chr2R 18788710 18788739 chr2R 18788791 18788820 13 78 3.0 3.5 3.2 3.1 110 chr2R 18788710 intron CG15080 + chr2R 18788765 intron CG15080 + chr2R 18788820 intron CG15080 + chr2R_13_18785001 chr2R_18785001 RC1_1-HE 1040 chr2R 18808062 18808097 chr2R 18808152 18808187 7 90 0.0 0.0 0.0 7.0 125 chr2R 18808062 intergenic CG15096 - chr2R 18808124 intergenic CG15096 - chr2R 18808187 intergenic CG15096 - chr2R_7_18805001 chr2R_18805001 RC1_1-HE 1041 chr2R 18862308 18862397 chr2R 18862396 18862484 5 88 0.0 0.0 0.0 5.0 176 chr2R 18862308 intergenic Jheh3 - chr2R 18862396 intergenic Jheh3 -,CG43069 + chr2R 18862484 intergenic CG43069 +,Jheh3 - chr2R_5_18860001 chr2R_18860001 RC1_1-HE 1042 chr2R 18987760 18987778 chr2R 18987837 18987855 10 76 7.0 9.0 8.0 1.1 95 chr2R 18987760 intron tn + chr2R 18987808 intron tn + chr2R 18987855 intron tn + chr2R_10_18985001 chr2R_18985001 RC1_1-HE 1043 chr2R 18989028 18989037 chr2R 18989107 18989116 9 79 6.0 5.5 5.8 1.3 88 chr2R 18989028 intron tn + chr2R 18989072 intron tn + chr2R 18989116 intron tn + chr2R_9_18985001 chr2R_18985001 RC1_1-HE 1044 chr2R 19026048 19026061 chr2R 19026150 19026163 9 106 8.0 3.5 5.8 1.3 115 chr2R 19026048 intron 5-HT1B - chr2R 19026106 intron 5-HT1B - chr2R 19026163 intron 5-HT1B - chr2R_9_19025001 chr2R_19025001 RC1_1-HE 1045 chr2R 19069924 19069944 chr2R 19070007 19070027 8 83 0.5 6.0 3.2 1.9 103 chr2R 19069924 intron 5-HT1A + chr2R 19069976 intron 5-HT1A + chr2R 19070027 intron 5-HT1A + chr2R_8_19065001 chr2R_19065001 RC1_1-HE 1046 chr2R 19104665 19104704 chr2R 19104838 19104877 12 173 1.5 1.0 1.2 5.5 212 chr2R 19104665 intron 5-HT1A + chr2R 19104771 intron 5-HT1A + chr2R 19104877 intron 5-HT1A + chr2R_12_19100001 chr2R_19100001 RC1_1-HE 1047 chr2R 19219393 19219428 chr2R 19219496 19219531 37 103 6.0 7.5 6.8 4.7 138 chr2R 19219393 intron hppy + chr2R 19219462 intron hppy + chr2R 19219531 intron hppy + chr2R_37_19215001 chr2R_19215001 RC1_1-HE 1048 chr2R 19256593 19256623 chr2R 19256679 19256709 8 86 6.0 3.5 4.8 1.4 116 chr2R 19256593 intergenic not near genes chr2R 19256651 intergenic not near genes chr2R 19256709 intergenic not near genes chr2R_8_19255001 chr2R_19255001 RC1_1-HE 1049 chr2R 19284415 19284440 chr2R 19289031 19289056 9 4616 4.0 4.5 4.2 1.7 4641 chr2R 19284415 intergenic CG10476 -,CG11906 - chr2R 19286736 intergenic CG10474 - chr2R 19289056 intergenic CG18607 +,CG18606 + chr2R_9_19285001 chr2R_19285001 RC1_1-HE 1050 chr2R 19295725 19295737 chr2R 19295807 19295819 4 82 2.0 2.5 2.2 1.2 94 chr2R 19295725 intron Tab2 + chr2R 19295772 intron Tab2 + chr2R 19295819 intron Tab2 + chr2R_4_19295001 chr2R_19295001 RC1_1-HE 1051 chr2R 19342462 19342497 chr2R 19342557 19342580 29 94 4.5 6.5 5.5 4.5 118 chr2R 19342462 intron,intron Rgk1 -,CG9975 + chr2R 19342521 intron,intron Rgk1 -,CG9975 + chr2R 19342580 intron,exon Rgk1 -,CG9975 + chr2R_29_19340001 chr2R_19340001 RC1_1-HE 1052 chr2R 19417003 19417020 chr2R 19417293 19417310 7 290 3.5 3.0 3.2 1.7 307 chr2R 19417003 intron hts - chr2R 19417156 intron hts - chr2R 19417310 intron hts - chr2R_7_19415001 chr2R_19415001 RC1_1-HE 1053 chr2R 19461295 19461327 chr2R 19461380 19461412 25 85 5.0 4.0 4.5 4.5 117 chr2R 19461295 intron par-1 + chr2R 19461354 intron par-1 + chr2R 19461412 intron par-1 + chr2R_25_19460001 chr2R_19460001 RC1_1-HE 1054 chr2R 19533941 19533973 chr2R 19534026 19534051 19 85 3.0 7.0 5.0 3.2 110 chr2R 19533941 intron sm - chr2R 19533996 intron sm - chr2R 19534051 intron sm - chr2R_19_19530001 chr2R_19530001 RC1_1-HE 1055 chr2R 19546221 19546240 chr2R 19546299 19546318 12 78 5.0 5.0 5.0 2.0 97 chr2R 19546221 intron sm - chr2R 19546270 intron sm - chr2R 19546318 intron sm - chr2R_12_19545001 chr2R_19545001 RC1_1-HE 1056 chr2R 19588738 19588781 chr2R 19588825 19588860 6 78 1.5 7.5 4.5 1.1 122 chr2R 19588738 intron sm - chr2R 19588799 intron sm - chr2R 19588860 intron sm - chr2R_6_19585001 chr2R_19585001 RC1_1-HE 1057 chr2R 19603972 19603994 chr2R 19604057 19604079 9 85 3.5 3.5 3.5 2.0 107 chr2R 19603972 intron sm - chr2R 19604026 intron sm - chr2R 19604079 intron sm - chr2R_9_19600001 chr2R_19600001 RC1_1-HE 1058 chr2R 19674591 19674616 chr2R 19674699 19674724 6 108 1.0 3.5 2.2 1.9 133 chr2R 19674591 intergenic not near genes chr2R 19674658 intergenic not near genes chr2R 19674724 intergenic not near genes chr2R_6_19670001 chr2R_19670001 RC1_1-HE 1059 chr2R 19699906 19699926 chr2R 19699992 19700012 7 86 0.5 4.0 2.2 2.2 106 chr2R 19699906 intergenic Obp56c - chr2R 19699959 intergenic Obp56c - chr2R 19700012 3` UTR Obp56c - chr2R_7_19695001 chr2R_19695001 RC1_1-HE 1060 chr2R 19802668 19802686 chr2R 19802752 19802770 9 84 4.0 0.5 2.2 2.8 102 chr2R 19802668 intergenic not near genes chr2R 19802719 intergenic not near genes chr2R 19802770 intergenic not near genes chr2R_9_19800001 chr2R_19800001 RC1_1-HE 1061 chr2R 19816084 19816109 chr2R 19816198 19816223 11 114 0.5 0.0 0.2 9.2 139 chr2R 19816084 3` UTR Obp56h + chr2R 19816154 3` UTR Obp56h + chr2R 19816223 intergenic Obp56h + chr2R_11_19815001 chr2R_19815001 RC1_1-HE 1062 chr2R 19914844 19914875 chr2R 19922257 19922288 mdg1 6 7413 3.5 4.5 4.0 1.2 7444 chr2R 19914844 intergenic not near genes chr2R 19918566 intergenic not near genes chr2R 19922288 intergenic not near genes chr2R_6_19915001 chr2R_19915001 RC1_1-HE 1063 chr2R 19933878 19933903 chr2R 19933954 19933983 15 79 7.0 4.5 5.8 2.2 105 chr2R 19933878 intergenic not near genes chr2R 19933930 intergenic not near genes chr2R 19933983 intergenic not near genes chr2R_15_19930001 chr2R_19930001 RC1_1-HE 1064 chr2R 19951960 19951996 chr2R 19952059 19952091 5 97 0.0 0.0 0.0 5.0 131 chr2R 19951960 intergenic CG10822 + chr2R 19952026 intergenic CG10822 + chr2R 19952091 intergenic CG10822 + chr2R_5_19950001 chr2R_19950001 RC1_1-HE 1065 chr2R 19957440 19957461 chr2R 19962637 19962657 copia 8 5197 4.0 7.5 5.8 1.2 5217 chr2R 19957440 intergenic CG44623 + chr2R 19960048 intergenic not near genes chr2R 19962657 intergenic not near genes chr2R_8_19960001 chr2R_19960001 RC1_1-HE 1066 chr2R 20022295 20022334 chr2R 20022378 20022417 16 81 3.5 4.5 4.0 3.2 122 chr2R 20022295 intergenic not near genes chr2R 20022356 intergenic not near genes chr2R 20022417 intergenic not near genes chr2R_16_20020001 chr2R_20020001 RC1_1-HE 1067 chr2R 20029439 20029459 chr2R 20029516 20029536 5 77 5.5 1.0 3.2 1.2 97 chr2R 20029439 intergenic not near genes chr2R 20029488 intergenic not near genes chr2R 20029536 intergenic not near genes chr2R_5_20025001 chr2R_20025001 RC1_1-HE 1068 chr2R 20031913 20031940 chr2R 20032010 20032037 14 97 4.5 7.5 6.0 2.0 124 chr2R 20031913 intergenic not near genes chr2R 20031975 intergenic not near genes chr2R 20032037 intergenic not near genes chr2R_14_20030001 chr2R_20030001 RC1_1-HE 1069 chr2R 20069241 20069275 chr2R 20071872 20071907 opus 7 2632 6.0 2.5 4.2 1.3 2666 chr2R 20069241 intergenic not near genes chr2R 20070574 intergenic not near genes chr2R 20071907 intergenic not near genes chr2R_7_20070001 chr2R_20070001 RC1_1-HE 1070 chr2R 20087994 20088028 chr2R 20088103 20088137 9 109 4.0 5.0 4.5 1.6 143 chr2R 20087994 intergenic not near genes chr2R 20088066 intergenic not near genes chr2R 20088137 intergenic not near genes chr2R_9_20085001 chr2R_20085001 RC1_1-HE 1071 chr2R 20125735 20125749 chr2R 20125812 20125826 5 77 3.5 6.5 5.0 0.8 91 chr2R 20125735 intergenic not near genes chr2R 20125780 intergenic not near genes chr2R 20125826 intergenic not near genes chr2R_5_20125001 chr2R_20125001 RC1_1-HE 1072 chr2R 20184835 20184867 chr2R 20184928 20184959 15 93 3.5 3.5 3.5 3.3 124 chr2R 20184835 intergenic not near genes chr2R 20184897 intergenic not near genes chr2R 20184959 intergenic not near genes chr2R_15_20180001 chr2R_20180001 RC1_1-HE 1073 chr2R 20192406 20192439 chr2R 20192483 20192516 10 77 3.0 4.0 3.5 2.2 110 chr2R 20192406 intergenic not near genes chr2R 20192461 intergenic not near genes chr2R 20192516 intergenic not near genes chr2R_10_20190001 chr2R_20190001 RC1_1-HE 1074 chr2R 20311596 20311625 chr2R 20311682 20311711 10 86 3.0 4.0 3.5 2.2 115 chr2R 20311596 intron CG13868 - chr2R 20311654 intron CG13868 - chr2R 20311711 intron CG13868 - chr2R_10_20310001 chr2R_20310001 RC1_1-HE 1075 chr2R 20338758 20338790 chr2R 20338839 20338871 8 81 1.5 1.0 1.2 3.6 113 chr2R 20338758 intergenic not near genes chr2R 20338814 intergenic not near genes chr2R 20338871 intergenic not near genes chr2R_8_20335001 chr2R_20335001 RC1_1-HE 1076 chr2R 20428454 20428479 chr2R 20428576 20428601 16 122 3.0 4.0 3.5 3.6 147 chr2R 20428454 intron CG12484 + chr2R 20428528 intron CG12484 + chr2R 20428601 intron CG12484 + chr2R_16_20425001 chr2R_20425001 RC1_1-HE 1077 chr2R 20459246 20459275 chr2R 20459331 20459360 13 85 0.0 0.0 0.0 13.0 114 chr2R 20459246 intron CG12484 + chr2R 20459303 intron CG12484 + chr2R 20459360 intron CG12484 + chr2R_13_20455001 chr2R_20455001 RC1_1-HE 1078 chr2R 20510627 20510655 chr2R 20510728 20510756 8 101 7.5 3.0 5.2 1.3 129 chr2R 20510627 intergenic CR44648 + chr2R 20510692 intergenic CR44648 + chr2R 20510756 intergenic CR44648 + chr2R_8_20510001 chr2R_20510001 RC1_1-HE 1079 chr2R 20528589 20528615 chr2R 20528694 20528704 16 104 5.0 3.5 4.2 3.1 115 chr2R 20528589 3` UTR CG30151 - chr2R 20528646 exon CG30151 - chr2R 20528704 exon CG30151 - chr2R_16_20525001 chr2R_20525001 RC1_1-HE 1080 chr2R 20541985 20542013 chr2R 20542064 20542092 10 79 5.0 3.5 4.2 1.9 107 chr2R 20541985 intergenic not near genes chr2R 20542038 intergenic not near genes chr2R 20542092 intergenic not near genes chr2R_10_20540001 chr2R_20540001 RC1_1-HE 1081 chr2R 20577090 20577120 chr2R 20577174 20577212 7 89 0.0 1.5 0.8 3.9 122 chr2R 20577090 intron qsm - chr2R 20577151 intron qsm - chr2R 20577212 intron qsm - chr2R_7_20575001 chr2R_20575001 RC1_1-HE 1082 chr2R 20592591 20592600 chr2R 20592670 20592679 5 79 6.5 5.5 6.0 0.7 88 chr2R 20592591 intron bl + chr2R 20592635 intron bl + chr2R 20592679 intron bl + chr2R_5_20590001 chr2R_20590001 RC1_1-HE 1083 chr2R 20616938 20616959 chr2R 20617022 20617043 7 84 6.0 2.0 4.0 1.4 105 chr2R 20616938 intron Hil - chr2R 20616990 intron Hil - chr2R 20617043 intron Hil - chr2R_7_20615001 chr2R_20615001 RC1_1-HE 1084 chr2R 20665938 20665968 chr2R 20666015 20666045 4 77 6.0 4.5 5.2 0.6 107 chr2R 20665938 intron Fem-1 - chr2R 20665992 intron Fem-1 - chr2R 20666045 intron Fem-1 - chr2R_4_20665001 chr2R_20665001 RC1_1-HE 1085 chr2R 20679699 20679724 chr2R 20679800 20679825 7 99 2.0 1.5 1.8 2.5 126 chr2R 20679699 intergenic not near genes chr2R 20679762 intergenic not near genes chr2R 20679825 intergenic not near genes chr2R_7_20675001 chr2R_20675001 RC1_1-HE 1086 chr2R 20690756 20690788 chr2R 20690833 20690865 15 76 3.0 2.5 2.8 3.9 109 chr2R 20690756 intergenic not near genes chr2R 20690810 intergenic not near genes chr2R 20690865 intergenic not near genes chr2R_15_20690001 chr2R_20690001 RC1_1-HE 1087 chr2R 20702679 20702702 chr2R 20702756 20702779 11 77 4.5 3.0 3.8 2.3 100 chr2R 20702679 intron dpr + chr2R 20702729 intron dpr + chr2R 20702779 intron dpr + chr2R_11_20700001 chr2R_20700001 RC1_1-HE 1088 chr2R 20739440 20739479 chr2R 20744209 20744232 F-element 18 4768 3.0 3.5 3.2 4.3 4792 chr2R 20739440 intron dpr + chr2R 20741836 intron dpr + chr2R 20744232 intron dpr + chr2R_18_20740001 chr2R_20740001 RC1_1-HE 1089 chr2R 20765581 20765602 chr2R 20765681 20765702 6 97 1.0 2.0 1.5 2.4 121 chr2R 20765581 intergenic not near genes chr2R 20765642 intergenic not near genes chr2R 20765702 intergenic not near genes chr2R_6_20765001 chr2R_20765001 RC1_1-HE 1090 chr2R 20812393 20812422 chr2R 20812513 20812542 11 118 1.0 2.0 1.5 4.4 149 chr2R 20812393 intergenic not near genes chr2R 20812468 intergenic not near genes chr2R 20812542 intergenic not near genes chr2R_11_20810001 chr2R_20810001 RC1_1-HE 1091 chr2R 20963637 20963646 chr2R 20963718 20963727 8 81 9.0 6.5 7.8 0.9 90 chr2R 20963637 intergenic not near genes chr2R 20963682 intergenic not near genes chr2R 20963727 intergenic not near genes chr2R_8_20960001 chr2R_20960001 RC1_1-HE 1092 chr2R 20963649 20963664 chr2R 20963716 20963745 9 76 7.0 6.0 6.5 1.2 96 chr2R 20963649 intergenic not near genes chr2R 20963697 intergenic not near genes chr2R 20963745 intergenic not near genes chr2R_9_20960001 chr2R_20960001 RC1_1-HE 1093 chr2R 20967026 20967055 chr2R 20967104 20967133 5 78 1.0 0.0 0.5 3.3 107 chr2R 20967026 intergenic not near genes chr2R 20967080 intergenic not near genes chr2R 20967133 intergenic not near genes chr2R_5_20965001 chr2R_20965001 RC1_1-HE 1094 chr2R 20967993 20968029 chr2R 20968073 20968109 11 80 2.0 3.0 2.5 3.1 116 chr2R 20967993 intergenic not near genes chr2R 20968051 intergenic not near genes chr2R 20968109 intergenic not near genes chr2R_11_20965001 chr2R_20965001 RC1_1-HE 1095 chr2R 21031755 21031775 chr2R 21031845 21031848 8 88 4.0 4.0 4.0 1.6 93 chr2R 21031755 intergenic not near genes chr2R 21031802 intergenic not near genes chr2R 21031848 intergenic not near genes chr2R_8_21030001 chr2R_21030001 RC1_1-HE 1096 chr2R 21040870 21040900 chr2R 21040950 21040980 12 80 1.0 9.5 5.2 1.9 110 chr2R 21040870 intergenic not near genes chr2R 21040925 intergenic not near genes chr2R 21040980 intergenic not near genes chr2R_12_21040001 chr2R_21040001 RC1_1-HE 1097 chr2R 21065231 21065254 chr2R 21065320 21065343 8 89 3.0 1.5 2.2 2.5 112 chr2R 21065231 intergenic Cht4 -,Cht12 - chr2R 21065287 intergenic Cht4 -,Cht12 - chr2R 21065343 intergenic Cht4 -,Cht12 - chr2R_8_21065001 chr2R_21065001 RC1_1-HE 1098 chr2R 21136903 21136939 chr2R 21136988 21137018 7 84 0.0 5.5 2.8 1.8 115 chr2R 21136903 intron Magi - chr2R 21136960 intron Magi - chr2R 21137018 intron Magi - chr2R_7_21135001 chr2R_21135001 RC1_1-HE 1099 chr2R 21160771 21160794 chr2R 21160848 21160854 5 74 3.0 0.0 1.5 2.0 83 chr2R 21160771 intergenic CG30389 - chr2R 21160812 intergenic CG30389 - chr2R 21160854 intergenic CG30389 - chr2R_5_21160001 chr2R_21160001 RC1_1-HE 1100 chr2R 21222457 21222486 chr2R 21222547 21222576 9 88 4.0 1.0 2.5 2.6 119 chr2R 21222457 intron ASPP - chr2R 21222516 intron ASPP - chr2R 21222576 intron ASPP - chr2R_9_21220001 chr2R_21220001 RC1_1-HE 1101 chr2R 21417278 21417282 chr2R 21417380 21417384 4 102 7.5 1.5 4.5 0.7 106 chr2R 21417278 intron Sdc - chr2R 21417331 intron Sdc - chr2R 21417384 intron Sdc - chr2R_4_21415001 chr2R_21415001 RC1_1-HE 1102 chr2R 21463382 21463391 chr2R 21463475 21463484 9 93 7.0 7.0 7.0 1.1 102 chr2R 21463382 intron Sdc - chr2R 21463433 intron Sdc - chr2R 21463484 intron Sdc - chr2R_9_21460001 chr2R_21460001 RC1_1-HE 1103 chr2R 21540693 21540703 chr2R 21540905 21540915 4 212 3.5 0.0 1.8 1.4 222 chr2R 21540693 intron Egfr + chr2R 21540804 intron Egfr + chr2R 21540915 intron Egfr + chr2R_4_21540001 chr2R_21540001 RC1_1-HE 1104 chr2R 21566172 21566182 chr2R 21566253 21566263 7 81 5.0 5.0 5.0 1.2 91 chr2R 21566172 intron CG10440 - chr2R 21566218 intron CG10440 - chr2R 21566263 intron CG10440 - chr2R_7_21565001 chr2R_21565001 RC1_1-HE 1105 chr2R 21660144 21660154 chr2R 21660221 21660231 4 77 5.5 0.5 3.0 1.0 87 chr2R 21660144 intergenic Rae1 - chr2R 21660188 intergenic Rae1 - chr2R 21660231 intergenic Rae1 - chr2R_4_21660001 chr2R_21660001 RC1_1-HE 1106 chr2R 21662316 21662325 chr2R 21662393 21662402 5 75 5.0 1.5 3.2 1.2 86 chr2R 21662316 5` UTR pirk - chr2R 21662359 5` UTR pirk - chr2R 21662402 5` UTR pirk - chr2R_5_21660001 chr2R_21660001 RC1_1-HE 1107 chr2R 21690439 21690469 chr2R 21690530 21690560 9 91 7.0 0.0 3.5 2.0 121 chr2R 21690439 3` UTR,exon CG42497 -,Tim10 - chr2R 21690500 intron,intron CG42497 -,Tim10 - chr2R 21690560 intron,intron CG42497 -,Tim10 - chr2R_9_21690001 chr2R_21690001 RC1_1-HE 1108 chr2R 21700158 21700185 chr2R 21700239 21700272 7 84 2.0 3.0 2.5 2.0 114 chr2R 21700158 intron HmgZ - chr2R 21700215 intron HmgZ - chr2R 21700272 intron HmgZ - chr2R_7_21700001 chr2R_21700001 RC1_1-HE 1109 chr2R 21738288 21738307 chr2R 21747449 21747458 roo 9 9158 2.5 9.5 6.0 1.3 9170 chr2R 21738288 intergenic not near genes chr2R 21742873 intergenic not near genes chr2R 21747458 intergenic not near genes chr2R_9_21740001 chr2R_21740001 RC1_1-HE 1110 chr2R 21753081 21753113 chr2R 21753567 21753599 roo 12 486 5.0 5.5 5.2 1.9 518 chr2R 21753081 intergenic not near genes chr2R 21753340 intergenic not near genes chr2R 21753599 intergenic not near genes chr2R_12_21750001 chr2R_21750001 RC1_1-HE 1111 chr2R 21809522 21809538 chr2R 21817762 21817778 roo 7 8240 8.0 3.5 5.8 1.0 8256 chr2R 21809522 intergenic not near genes chr2R 21813650 intergenic not near genes chr2R 21817778 intergenic not near genes chr2R_7_21810001 chr2R_21810001 RC1_1-HE 1112 chr2R 21861699 21861730 chr2R 21861776 21861807 18 77 5.0 4.0 4.5 3.3 108 chr2R 21861699 exon CG9294 + chr2R 21861753 exon CG9294 + chr2R 21861807 exon CG9294 + chr2R_18_21860001 chr2R_21860001 RC1_1-HE 1113 chr2R 21863511 21863521 chr2R 21863604 21863614 8 93 1.0 7.5 4.2 1.5 103 chr2R 21863511 intergenic not near genes chr2R 21863562 intergenic not near genes chr2R 21863614 intergenic not near genes chr2R_8_21860001 chr2R_21860001 RC1_1-HE 1114 chr2R 21897064 21897095 chr2R 21897141 21897172 10 77 2.0 2.0 2.0 3.3 108 chr2R 21897064 intron Fili + chr2R 21897118 intron Fili + chr2R 21897172 intron Fili + chr2R_10_21895001 chr2R_21895001 RC1_1-HE 1115 chr2R 21906279 21906302 chr2R 21906381 21906404 5 102 1.0 1.5 1.2 2.3 125 chr2R 21906279 intron Fili + chr2R 21906342 intron Fili + chr2R 21906404 intron Fili + chr2R_5_21905001 chr2R_21905001 RC1_1-HE 1116 chr2R 21946789 21946801 chr2R 21946886 21946898 5 97 5.5 5.0 5.2 0.8 109 chr2R 21946789 intergenic not near genes chr2R 21946844 intergenic not near genes chr2R 21946898 intergenic not near genes chr2R_5_21945001 chr2R_21945001 RC1_1-HE 1117 chr2R 21958328 21958358 chr2R 21958650 21958680 14 322 0.0 3.0 1.5 5.6 352 chr2R 21958328 intergenic not near genes chr2R 21958504 intergenic not near genes chr2R 21958680 intergenic not near genes chr2R_14_21955001 chr2R_21955001 RC1_1-HE 1118 chr2R 21981335 21981348 chr2R 21981447 21981460 5 112 3.5 2.5 3.0 1.2 125 chr2R 21981335 intergenic Gr58a + chr2R 21981398 intergenic Gr58a + chr2R 21981460 intergenic Gr58a + chr2R_5_21980001 chr2R_21980001 RC1_1-HE 1119 chr2R 22037786 22037806 chr2R 22037869 22037889 12 83 2.0 1.0 1.5 4.8 103 chr2R 22037786 intron CG34370 - chr2R 22037838 intron CG34370 - chr2R 22037889 intron CG34370 - chr2R_12_22035001 chr2R_22035001 RC1_1-HE 1120 chr2R 22043555 22043583 chr2R 22043636 22043664 9 81 0.0 2.5 1.2 4.1 109 chr2R 22043555 intergenic not near genes chr2R 22043610 intergenic not near genes chr2R 22043664 intergenic not near genes chr2R_9_22040001 chr2R_22040001 RC1_1-HE 1121 chr2R 22072683 22072713 chr2R 22072769 22072799 10 85 1.0 3.5 2.2 3.1 116 chr2R 22072683 intron CG11474 - chr2R 22072741 intron CG11474 - chr2R 22072799 exon CG11474 - chr2R_10_22070001 chr2R_22070001 RC1_1-HE 1122 chr2R 22124304 22124341 chr2R 22124394 22124431 13 88 2.0 2.5 2.2 4.1 127 chr2R 22124304 3` UTR mei-S332 + chr2R 22124368 intergenic mei-S332 +,GM130 - chr2R 22124431 intergenic mei-S332 +,GM130 - chr2R_13_22120001 chr2R_22120001 RC1_1-HE 1123 chr2R 22178773 22178776 chr2R 22178860 22178863 4 87 0.5 3.0 1.8 1.4 90 chr2R 22178773 intron CG11170 - chr2R 22178818 intron CG11170 - chr2R 22178863 intron CG11170 - chr2R_4_22175001 chr2R_22175001 RC1_1-HE 1124 chr2R 22179221 22179235 chr2R 22179305 22179319 4 84 0.0 6.0 3.0 1.0 98 chr2R 22179221 intron CG11170 - chr2R 22179270 intron CG11170 - chr2R 22179319 intron CG11170 - chr2R_4_22175001 chr2R_22175001 RC1_1-HE 1125 chr2R 22246992 22247200 chr2R 22247084 22247288 13 90 5.5 3.0 4.2 2.5 296 chr2R 22246992 intron dve + chr2R 22247140 intron dve + chr2R 22247288 intron dve + chr2R_13_22245001 chr2R_22245001 RC1_1-HE 1126 chr2R 22273187 22273208 chr2R 22273276 22273308 20 99 5.5 6.0 5.8 2.9 121 chr2R 22273187 intron dve + chr2R 22273248 intron dve + chr2R 22273308 intron dve + chr2R_20_22270001 chr2R_22270001 RC1_1-HE 1127 chr2R 22290079 22290102 chr2R 22290164 22290187 9 85 3.0 6.0 4.5 1.6 108 chr2R 22290079 intergenic not near genes chr2R 22290133 intergenic not near genes chr2R 22290187 intergenic not near genes chr2R_9_22290001 chr2R_22290001 RC1_1-HE 1128 chr2R 22302278 22302285 chr2R 22302365 22302372 4 87 4.5 5.0 4.8 0.7 94 chr2R 22302278 intron wdp - chr2R 22302325 intron wdp - chr2R 22302372 intron wdp - chr2R_4_22300001 chr2R_22300001 RC1_1-HE 1129 chr2R 22349689 22349723 chr2R 22351474 22351508 jockey 24 1785 8.5 11.5 10.0 2.2 1819 chr2R 22349689 intron Liprin-gamma - chr2R 22350598 intron Liprin-gamma - chr2R 22351508 intron Liprin-gamma - chr2R_24_22350001 chr2R_22350001 RC1_1-HE 1130 chr2R 22355602 22355638 chr2R 22355680 22355716 22 78 9.5 5.0 7.2 2.7 114 chr2R 22355602 intron Liprin-gamma - chr2R 22355659 intron Liprin-gamma - chr2R 22355716 intron Liprin-gamma - chr2R_22_22355001 chr2R_22355001 RC1_1-HE 1131 chr2R 22360380 22360405 chr2R 22360814 22360823 jockey 9 432 9.0 1.5 5.2 1.5 443 chr2R 22360380 intron Liprin-gamma - chr2R 22360602 intron Liprin-gamma - chr2R 22360823 intron Liprin-gamma - chr2R_9_22360001 chr2R_22360001 RC1_1-HE 1132 chr2R 22367254 22367293 chr2R 22367348 22367387 23 92 4.5 7.0 5.8 3.4 133 chr2R 22367254 intron Liprin-gamma - chr2R 22367320 intron Liprin-gamma - chr2R 22367387 intron Liprin-gamma - chr2R_23_22365001 chr2R_22365001 RC1_1-HE 1133 chr2R 22420662 22420682 chr2R 22420748 22420768 6 86 0.5 6.0 3.2 1.4 106 chr2R 22420662 intergenic mRpS29 -,rad50 + chr2R 22420715 intergenic rad50 +,mRpS29 - chr2R 22420768 intergenic rad50 +,mRpS29 - chr2R_6_22420001 chr2R_22420001 RC1_1-HE 1134 chr2R 22438170 22438193 chr2R 22438265 22438288 17 95 2.0 0.5 1.2 7.7 118 chr2R 22438170 intergenic not near genes chr2R 22438229 intergenic not near genes chr2R 22438288 intergenic not near genes chr2R_17_22435001 chr2R_22435001 RC1_1-HE 1135 chr2R 22460381 22460406 chr2R 22460461 22460486 11 79 4.5 6.0 5.2 1.8 105 chr2R 22460381 intron CG10384 + chr2R 22460434 intron CG10384 + chr2R 22460486 intron CG10384 + chr2R_11_22460001 chr2R_22460001 RC1_1-HE 1136 chr2R 22465316 22465345 chr2R 22465510 22465545 BS 9 195 1.0 5.0 3.0 2.2 229 chr2R 22465316 intron CG10384 + chr2R 22465430 intron CG10384 + chr2R 22465545 intron CG10384 + chr2R_9_22465001 chr2R_22465001 RC1_1-HE 1137 chr2R 22518238 22518250 chr2R 22518312 22518331 5 80 4.0 8.5 6.2 0.7 93 chr2R 22518238 intron px - chr2R 22518284 intron px - chr2R 22518331 intron px - chr2R_5_22515001 chr2R_22515001 RC1_1-HE 1138 chr2R 22525748 22525785 chr2R 22529304 22529341 jockey 10 3549 1.0 6.0 3.5 2.2 3593 chr2R 22525748 intron px - chr2R 22527544 intron px - chr2R 22529341 intron px - chr2R_10_22525001 chr2R_22525001 RC1_1-HE 1139 chr2R 22575658 22575694 chr2R 22575738 22575774 8 80 1.0 3.5 2.2 2.5 116 chr2R 22575658 intron dnr1 - chr2R 22575716 intron dnr1 - chr2R 22575774 intron dnr1 - chr2R_8_22575001 chr2R_22575001 RC1_1-HE 1140 chr2R 22605166 22605202 chr2R 22605245 22605279 24 79 5.5 5.0 5.2 3.9 113 chr2R 22605166 exon CG4294 - chr2R 22605222 intron CG4294 - chr2R 22605279 exon CG4294 - chr2R_24_22605001 chr2R_22605001 RC1_1-HE 1141 chr2R 22616580 22616612 chr2R 22616665 22616700 10 88 5.0 2.5 3.8 2.1 120 chr2R 22616580 intron CG33143 + chr2R 22616640 intron CG33143 + chr2R 22616700 intron CG33143 + chr2R_10_22615001 chr2R_22615001 RC1_1-HE 1142 chr2R 22618457 22618493 chr2R 22618297 22618587 7 103 2.0 12.5 7.2 0.9 130 chr2R 22618457 intron CG33143 + chr2R 22618522 intron CG33143 + chr2R 22618587 intron CG33143 + chr2R_7_22615001 chr2R_22615001 RC1_1-HE 1143 chr2R 22761020 22761058 chr2R 22761102 22761140 21 82 4.5 6.5 5.5 3.2 120 chr2R 22761020 intron CG42260 - chr2R 22761080 intron CG42260 - chr2R 22761140 intron CG42260 - chr2R_21_22760001 chr2R_22760001 RC1_1-HE 1144 chr2R 22774959 22775002 chr2R 22775379 22775422 jockey 19 420 7.5 4.0 5.8 2.8 463 chr2R 22774959 intron CG42260 - chr2R 22775190 intron CG42260 - chr2R 22775422 intron CG42260 - chr2R_19_22775001 chr2R_22775001 RC1_1-HE 1145 chr2R 22781251 22781261 chr2R 22781524 22781534 6 273 9.0 7.5 8.2 0.7 283 chr2R 22781251 intron CG42260 - chr2R 22781392 intron CG42260 - chr2R 22781534 intron CG42260 - chr2R_6_22780001 chr2R_22780001 RC1_1-HE 1146 chr2R 22785726 22785761 chr2R 22785805 22785839 19 79 5.5 4.0 4.8 3.3 113 chr2R 22785726 intron CG42260 - chr2R 22785782 intron CG42260 - chr2R 22785839 intron CG42260 - chr2R_19_22785001 chr2R_22785001 RC1_1-HE 1147 chr2R 22834452 22834460 chr2R 22836591 22836599 6 2139 11.0 6.0 8.5 0.6 2147 chr2R 22834452 exon CG30265 + chr2R 22835526 exon CG12490 + chr2R 22836599 3` UTR CG12490 + chr2R_6_22835001 chr2R_22835001 RC1_1-HE 1148 chr2R 22843029 22843044 chr2R 22844988 22845003 flea 5 1959 2.5 5.0 3.8 1.0 1974 chr2R 22843029 intergenic CG9826 + chr2R 22844016 intergenic not near genes chr2R 22845003 intergenic not near genes chr2R_5_22840001 chr2R_22840001 RC1_1-HE 1149 chr2R 22860780 22860803 chr2R 22860872 22860895 4 92 5.0 0.5 2.8 1.1 115 chr2R 22860780 intergenic not near genes chr2R 22860838 intergenic not near genes chr2R 22860895 intergenic not near genes chr2R_4_22860001 chr2R_22860001 RC1_1-HE 1150 chr2R 22905033 22905062 chr2R 22905169 22905198 9 136 4.5 0.5 2.5 2.6 165 chr2R 22905033 intron nahoda + chr2R 22905116 intron nahoda + chr2R 22905198 intron nahoda + chr2R_9_22905001 chr2R_22905001 RC1_1-HE 1151 chr2R 22978284 22978315 chr2R 22978363 22978395 5 80 1.0 2.5 1.8 1.8 111 chr2R 22978284 intergenic not near genes chr2R 22978340 intergenic not near genes chr2R 22978395 intergenic not near genes chr2R_5_22975001 chr2R_22975001 RC1_1-HE 1152 chr2R 23048919 23048953 chr2R 23049006 23049040 19 87 1.5 5.0 3.2 4.5 121 chr2R 23048919 intergenic not near genes chr2R 23048980 intergenic not near genes chr2R 23049040 intergenic not near genes chr2R_19_23045001 chr2R_23045001 RC1_1-HE 1153 chr2R 23052649 23052688 chr2R 23052726 23052765 14 76 9.0 8.0 8.5 1.5 116 chr2R 23052649 intergenic not near genes chr2R 23052707 intergenic not near genes chr2R 23052765 intergenic not near genes chr2R_14_23050001 chr2R_23050001 RC1_1-HE 1154 chr2R 23110635 23110668 chr2R 23110720 23110738 4 80 2.0 4.0 3.0 1.0 103 chr2R 23110635 intron CR44781 - chr2R 23110686 intron CR44781 - chr2R 23110738 3` UTR CR44781 - chr2R_4_23110001 chr2R_23110001 RC1_1-HE 1155 chr2R 23131465 23131474 chr2R 23131557 23131566 5 92 2.0 1.5 1.8 1.8 101 chr2R 23131465 intergenic not near genes chr2R 23131516 intergenic not near genes chr2R 23131566 intergenic not near genes chr2R_5_23130001 chr2R_23130001 RC1_1-HE 1156 chr2R 23134839 23134847 chr2R 23134921 23134930 4 83 3.5 7.0 5.2 0.6 91 chr2R 23134839 intergenic not near genes chr2R 23134884 intergenic not near genes chr2R 23134930 intergenic not near genes chr2R_4_23130001 chr2R_23130001 RC1_1-HE 1157 chr2R 23155715 23155876 chr2R 23155803 23155953 10 87 3.0 2.5 2.8 2.6 238 chr2R 23155715 intron CG9899 + chr2R 23155834 intron CG9899 + chr2R 23155953 intron CG9899 + chr2R_10_23155001 chr2R_23155001 RC1_1-HE 1158 chr2R 23254777 23254812 chr2R 23254863 23254898 13 82 2.5 1.5 2.0 4.3 121 chr2R 23254777 intergenic not near genes chr2R 23254838 intergenic not near genes chr2R 23254898 intergenic not near genes chr2R_13_23250001 chr2R_23250001 RC1_1-HE 1159 chr2R 23265720 23265737 chr2R 23265827 23265844 8 107 3.5 7.5 5.5 1.2 124 chr2R 23265720 intergenic CG12782 - chr2R 23265782 intergenic CG12782 - chr2R 23265844 intergenic CG12782 - chr2R_8_23265001 chr2R_23265001 RC1_1-HE 1160 chr2R 23275651 23275684 chr2R 23275744 23275758 10 91 1.5 1.5 1.5 4.0 107 chr2R 23275651 intergenic ord - chr2R 23275704 intergenic ord - chr2R 23275758 intergenic ord - chr2R_10_23275001 chr2R_23275001 RC1_1-HE 1161 chr2R 23279267 23279294 chr2R 23279349 23279376 10 82 2.0 2.5 2.2 3.1 109 chr2R 23279267 intergenic not near genes chr2R 23279322 intergenic not near genes chr2R 23279376 intergenic not near genes chr2R_10_23275001 chr2R_23275001 RC1_1-HE 1162 chr2R 23346528 23346555 chr2R 23346602 23346632 9 77 1.5 3.5 2.5 2.6 104 chr2R 23346528 intron CG3502 - chr2R 23346580 intron CG3502 - chr2R 23346632 intron CG3502 - chr2R_9_23345001 chr2R_23345001 RC1_1-HE 1163 chr2R 23437222 23437243 chr2R 23437300 23437310 7 76 3.5 6.0 4.8 1.2 88 chr2R 23437222 intergenic not near genes chr2R 23437266 intergenic not near genes chr2R 23437310 intergenic not near genes chr2R_7_23435001 chr2R_23435001 RC1_1-HE 1164 chr2R 23518199 23518211 chr2R 23518278 23518290 4 79 4.5 4.0 4.2 0.8 91 chr2R 23518199 intergenic not near genes chr2R 23518244 intergenic not near genes chr2R 23518290 intergenic not near genes chr2R_4_23515001 chr2R_23515001 RC1_1-HE 1165 chr2R 23529573 23529606 chr2R 23537150 23537166 412 6 7574 2.5 2.0 2.2 1.9 7593 chr2R 23529573 intron bw - chr2R 23533370 intron bw - chr2R 23537166 exon bw - chr2R_6_23530001 chr2R_23530001 RC1_1-HE 1166 chr2R 23553736 23553750 chr2R 23553827 23553841 5 91 0.0 4.5 2.2 1.6 105 chr2R 23553736 intron pita - chr2R 23553788 intron pita - chr2R 23553841 intron pita - chr2R_5_23550001 chr2R_23550001 RC1_1-HE 1167 chr2R 23582908 23582927 chr2R 23583146 23583169 9 240 3.5 8.0 5.8 1.3 261 chr2R 23582908 intron apt + chr2R 23583038 intron apt + chr2R 23583169 intron apt + chr2R_9_23580001 chr2R_23580001 RC1_1-HE 1168 chr2R 23607039 23607189 chr2R 23607118 23607283 27 91 7.0 4.0 5.5 4.2 244 chr2R 23607039 intron CG17664 - chr2R 23607161 intron CG17664 - chr2R 23607283 intron CG17664 - chr2R_27_23605001 chr2R_23605001 RC1_1-HE 1169 chr2R 23654888 23654922 chr2R 23654972 23655006 13 82 5.5 0.0 2.8 3.4 118 chr2R 23654888 intergenic retn + chr2R 23654947 intergenic retn + chr2R 23655006 intergenic retn + chr2R_13_23650001 chr2R_23650001 RC1_1-HE 1170 chr2R 23709150 23709188 chr2R 23709228 23709266 15 78 5.5 2.5 4.0 3.0 116 chr2R 23709150 intron l(2)not - chr2R 23709208 intron,5` UTR l(2)not -,CR45326 + chr2R 23709266 intron,5` UTR l(2)not -,CR45326 + chr2R_15_23705001 chr2R_23705001 RC1_1-HE 1171 chr2R 23730232 23730256 chr2R 24658488 24658498 6 928248 8.0 15.0 11.5 0.5 928266 chr2R 23730232 intron Sesn + chr2R 24194365 exon ocm + chr2R 24658498 intergenic not near genes chr2R_6_24190001 chr2R_24190001 RC1_1-HE 1172 chr2R 23826581 23826608 chr2R 23826670 23826697 11 89 2.5 7.5 5.0 1.8 116 chr2R 23826581 intron CG5549 + chr2R 23826639 intron CG5549 + chr2R 23826697 intron CG5549 + chr2R_11_23825001 chr2R_23825001 RC1_1-HE 1173 chr2R 23857106 23857139 chr2R 23857193 23857226 15 87 4.5 7.0 5.8 2.2 120 chr2R 23857106 intron bgcn - chr2R 23857166 intron bgcn - chr2R 23857226 exon bgcn - chr2R_15_23855001 chr2R_23855001 RC1_1-HE 1174 chr2R 23914314 23914324 chr2R 23921939 23921949 412 7 7625 5.0 5.0 5.0 1.2 7635 chr2R 23914314 exon kcc + chr2R 23918132 intron kcc + chr2R 23921949 intron kcc + chr2R_7_23915001 chr2R_23915001 RC1_1-HE 1175 chr2R 23977443 23977453 chr2R 23977604 23977614 4 161 6.0 1.5 3.8 0.8 171 chr2R 23977443 intergenic Gadd34 - chr2R 23977528 intergenic Gadd34 - chr2R 23977614 intergenic Gadd34 - chr2R_4_23975001 chr2R_23975001 RC1_1-HE 1176 chr2R 24077934 24077955 chr2R 24078011 24078032 9 77 4.0 5.5 4.8 1.6 98 chr2R 24077934 3` UTR Mlp60A + chr2R 24077983 3` UTR Mlp60A + chr2R 24078032 3` UTR Mlp60A + chr2R_9_24075001 chr2R_24075001 RC1_1-HE 1177 chr2R 24177233 24177248 chr2R 24184719 24184734 412 7 7486 7.5 2.5 5.0 1.2 7501 chr2R 24177233 3` UTR Nop60B + chr2R 24180984 intron Nop60B + chr2R 24184734 3` UTR Nop60B + chr2R_7_24180001 chr2R_24180001 RC1_1-HE 1178 chr2R 24353426 24353460 chr2R 24361789 24361823 roo 8 8363 1.5 2.5 2.0 2.7 8397 chr2R 24353426 intron,intron bs +,CR44811 - chr2R 24357624 intron,intron bs +,CR44811 - chr2R 24361823 intron,intron bs +,CR44811 - chr2R_8_24355001 chr2R_24355001 RC1_1-HE 1179 chr2R 24432816 24432843 chr2R 24432901 24432928 20 84 4.0 6.0 5.0 3.3 112 chr2R 24432816 intergenic Pgam5-2 - chr2R 24432872 intergenic Pgam5-2 - chr2R 24432928 intergenic Pgam5-2 - chr2R_20_24430001 chr2R_24430001 RC1_1-HE 1180 chr2R 24441027 24441060 chr2R 24441125 24441158 12 97 1.0 1.5 1.2 5.5 131 chr2R 24441027 intergenic not near genes chr2R 24441092 intergenic not near genes chr2R 24441158 intergenic not near genes chr2R_12_24440001 chr2R_24440001 RC1_1-HE 1181 chr2R 24590109 24590143 chr2R 24590202 24590236 12 91 5.0 4.0 4.5 2.2 127 chr2R 24590109 intron pio + chr2R 24590172 intron pio + chr2R 24590236 intron pio + chr2R_12_24590001 chr2R_24590001 RC1_1-HE 1182 chr2R 24619857 24619871 chr2R 24619937 24619951 5 79 5.0 5.5 5.2 0.8 94 chr2R 24619857 intron CG13594 - chr2R 24619904 intron CG13594 - chr2R 24619951 intron CG13594 - chr2R_5_24615001 chr2R_24615001 RC1_1-HE 1183 chr2R 24647590 24647615 chr2R 24655148 24655173 412 11 7557 2.0 2.0 2.0 3.7 7583 chr2R 24647590 intergenic not near genes chr2R 24651382 intergenic not near genes chr2R 24655173 intergenic not near genes chr2R_11_24650001 chr2R_24650001 RC1_1-HE 1184 chr2R 24722367 24722395 chr2R 24722450 24722478 8 83 4.5 5.5 5.0 1.3 111 chr2R 24722367 intron Mid1 - chr2R 24722422 intron Mid1 - chr2R 24722478 intron Mid1 - chr2R_8_24720001 chr2R_24720001 RC1_1-HE 1185 chr2R 24727881 24727913 chr2R 24735390 24735422 mdg1 12 7509 4.5 2.0 3.2 2.9 7541 chr2R 24727881 intron Mid1 - chr2R 24731652 intron Mid1 - chr2R 24735422 intron Mid1 - chr2R_12_24730001 chr2R_24730001 RC1_1-HE 1186 chr2R 24736083 24736116 chr2R 24736162 24736195 11 79 1.5 3.5 2.5 3.1 112 chr2R 24736083 intron Mid1 - chr2R 24736139 intron Mid1 - chr2R 24736195 intron Mid1 - chr2R_11_24735001 chr2R_24735001 RC1_1-HE 1187 chr2R 24763609 24763641 chr2R 24765586 24765613 G2 7 1976 4.0 1.0 2.5 2.0 2004 chr2R 24763609 exon CG3894 + chr2R 24764611 intron CG3894 + chr2R 24765613 exon CG3894 + chr2R_7_24760001 chr2R_24760001 RC1_1-HE 1188 chr2R 24767990 24768019 chr2R 24768077 24768106 5 87 1.5 1.5 1.5 2.0 116 chr2R 24767990 5` UTR GstE12 - chr2R 24768048 5` UTR GstE12 - chr2R 24768106 5` UTR GstE12 - chr2R_5_24765001 chr2R_24765001 RC1_1-HE 1189 chr2R 25078987 25079022 chr2R 25079116 25079151 18 129 3.5 6.5 5.0 3.0 164 chr2R 25078987 intron gol - chr2R 25079069 intron gol - chr2R 25079151 intron gol - chr2R_18_25075001 chr2R_25075001 RC1_1-HE 1190 chr2R 25086115 25086145 chr2R 25086257 25086287 10 142 4.5 5.0 4.8 1.7 172 chr2R 25086115 intergenic lov - chr2R 25086201 intergenic lov - chr2R 25086287 intergenic lov - chr2R_10_25085001 chr2R_25085001 RC1_1-HE 1191 chr2R 25101273 25101307 chr2R 25101376 25101410 18 103 6.0 6.5 6.2 2.5 137 chr2R 25101273 intron lov - chr2R 25101342 intron lov - chr2R 25101410 intron lov - chr2R_18_25100001 chr2R_25100001 RC1_1-HE 1192 chr2R 25141647 25141678 chr2R 25159338 25159369 roo 9 17691 3.5 2.0 2.8 2.4 17722 chr2R 25141647 intergenic not near genes chr2R 25150508 intergenic not near genes chr2R 25159369 intergenic not near genes chr2R_9_25150001 chr2R_25150001 RC1_1-HE 1193 chr3L 68978 69014 chr3L 69066 69102 17 88 5.5 3.5 4.5 3.1 124 chr3L 68978 3` UTR Lsp1gamma + chr3L 69040 intergenic Lsp1gamma +,CR44510 + chr3L 69102 intergenic CR44510 +,Lsp1gamma + chr3L_17_65001 chr3L_65001 RC1_1-HE 1194 chr3L 71929 71963 chr3L 72013 72047 24 84 6.0 9.5 7.8 2.7 118 chr3L 71929 intergenic CR43988 - chr3L 71988 intergenic CR43988 - chr3L 72047 intergenic CR43988 - chr3L_24_70001 chr3L_70001 RC1_1-HE 1195 chr3L 110214 110245 chr3L 119382 119413 roo 10 9168 3.0 3.0 3.0 2.5 9199 chr3L 110214 intergenic not near genes chr3L 114814 intergenic not near genes chr3L 119413 intergenic not near genes chr3L_10_110001 chr3L_110001 RC1_1-HE 1196 chr3L 121847 121881 chr3L 122097 122131 15 249 1.5 0.0 0.8 8.3 284 chr3L 121847 intergenic not near genes chr3L 121989 intergenic not near genes chr3L 122131 intergenic not near genes chr3L_15_120001 chr3L_120001 RC1_1-HE 1197 chr3L 321377 321395 chr3L 321470 321473 5 90 0.5 3.0 1.8 1.8 96 chr3L 321377 intron CG32344 - chr3L 321425 intron CG32344 - chr3L 321473 intron CG32344 - chr3L_5_320001 chr3L_320001 RC1_1-HE 1198 chr3L 379734 379770 chr3L 379836 379872 18 102 5.0 2.5 3.8 3.8 138 chr3L 379734 intron trh - chr3L 379803 intron trh - chr3L 379872 intron trh - chr3L_18_375001 chr3L_375001 RC1_1-HE 1199 chr3L 390958 390985 chr3L 391065 391092 14 107 3.5 5.5 4.5 2.5 134 chr3L 390958 intron trh - chr3L 391025 intron trh - chr3L 391092 intron trh - chr3L_14_390001 chr3L_390001 RC1_1-HE 1200 chr3L 402687 402717 chr3L 409741 409771 297 18 7054 9.5 8.0 8.8 1.8 7084 chr3L 402687 intergenic not near genes chr3L 406229 intergenic not near genes chr3L 409771 intergenic not near genes chr3L_18_405001 chr3L_405001 RC1_1-HE 1201 chr3L 428186 428208 chr3L 428308 428330 8 122 5.5 0.0 2.8 2.1 144 chr3L 428186 intergenic not near genes chr3L 428258 intergenic not near genes chr3L 428330 intergenic not near genes chr3L_8_425001 chr3L_425001 RC1_1-HE 1202 chr3L 440271 440309 chr3L 440348 440386 22 77 4.5 8.0 6.2 3.1 115 chr3L 440271 intron klar - chr3L 440328 intron klar - chr3L 440386 intron klar - chr3L_22_440001 chr3L_440001 RC1_1-HE 1203 chr3L 445548 445579 chr3L 445625 445656 4 77 3.0 0.0 1.5 1.6 108 chr3L 445548 exon klar - chr3L 445602 intron klar - chr3L 445656 intron klar - chr3L_4_445001 chr3L_445001 RC1_1-HE 1204 chr3L 457031 457042 chr3L 457110 457121 6 79 4.0 4.0 4.0 1.2 90 chr3L 457031 intron klar - chr3L 457076 intron klar - chr3L 457121 intron klar - chr3L_6_455001 chr3L_455001 RC1_1-HE 1205 chr3L 459977 459988 chr3L 460055 460066 7 78 6.0 8.0 7.0 0.9 89 chr3L 459977 intron klar - chr3L 460022 intron klar - chr3L 460066 intron klar - chr3L_7_460001 chr3L_460001 RC1_1-HE 1206 chr3L 459989 460008 chr3L 460054 460086 11 76 2.0 7.5 4.8 1.9 97 chr3L 459989 intron klar - chr3L 460038 intron klar - chr3L 460086 intron klar - chr3L_11_460001 chr3L_460001 RC1_1-HE 1207 chr3L 507047 507064 chr3L 507134 507151 7 87 2.5 2.0 2.2 2.2 104 chr3L 507047 intron klar - chr3L 507099 intron klar - chr3L 507151 intron klar - chr3L_7_505001 chr3L_505001 RC1_1-HE 1208 chr3L 515479 515506 chr3L 515601 515628 7 121 1.5 2.0 1.8 2.5 149 chr3L 515479 intron klar - chr3L 515554 intron klar - chr3L 515628 intron klar - chr3L_7_515001 chr3L_515001 RC1_1-HE 1209 chr3L 516167 516185 chr3L 516255 516273 4 88 7.0 2.0 4.5 0.7 106 chr3L 516167 intron klar - chr3L 516220 intron klar - chr3L 516273 intron klar - chr3L_4_515001 chr3L_515001 RC1_1-HE 1210 chr3L 535043 535079 chr3L 535126 535162 17 83 5.0 6.0 5.5 2.6 119 chr3L 535043 intron klar - chr3L 535102 intron klar - chr3L 535162 intron klar - chr3L_17_535001 chr3L_535001 RC1_1-HE 1211 chr3L 606901 606922 chr3L 606970 607002 4 76 0.5 0.0 0.2 3.3 101 chr3L 606901 intergenic Reg-2 - chr3L 606952 intergenic Reg-2 - chr3L 607002 intergenic Reg-2 - chr3L_4_605001 chr3L_605001 RC1_1-HE 1212 chr3L 648124 648131 chr3L 648319 648326 4 195 9.0 2.5 5.8 0.6 202 chr3L 648124 intergenic Gale + chr3L 648225 intergenic Gale + chr3L 648326 intergenic Gale + chr3L_4_645001 chr3L_645001 RC1_1-HE 1213 chr3L 695167 695179 chr3L 695400 695411 9 233 4.0 0.0 2.0 3.0 244 chr3L 695167 intron CG13894 - chr3L 695289 intron CG13894 - chr3L 695411 intron CG13894 - chr3L_9_695001 chr3L_695001 RC1_1-HE 1214 chr3L 746493 746527 chr3L 746579 746613 11 86 0.0 4.0 2.0 3.7 120 chr3L 746493 intron hng3 - chr3L 746553 intron hng3 - chr3L 746613 intron hng3 - chr3L_11_745001 chr3L_745001 RC1_1-HE 1215 chr3L 789914 789946 chr3L 790400 790432 roo 22 486 4.0 5.0 4.5 4.0 518 chr3L 789914 intergenic not near genes chr3L 790173 intergenic not near genes chr3L 790432 intergenic not near genes chr3L_22_790001 chr3L_790001 RC1_1-HE 1216 chr3L 813766 813800 chr3L 813846 813880 16 79 5.5 1.5 3.5 3.6 114 chr3L 813766 5` UTR CR44537 + chr3L 813823 5` UTR CR44537 + chr3L 813880 5` UTR CR44537 + chr3L_16_810001 chr3L_810001 RC1_1-HE 1217 chr3L 832601 832634 chr3L 832682 832715 8 81 1.5 2.0 1.8 2.9 114 chr3L 832601 intron,3` UTR CG13900 -,snoRNA:Psi28S-3308 - chr3L 832658 intron CG13900 - chr3L 832715 exon CG13900 - chr3L_8_830001 chr3L_830001 RC1_1-HE 1218 chr3L 857996 858025 chr3L 866478 866507 Tirant 7 8481 6.5 6.0 6.2 1.0 8511 chr3L 857996 intergenic not near genes chr3L 862252 intergenic not near genes chr3L 866507 5` UTR CG12502 + chr3L_7_860001 chr3L_860001 RC1_1-HE 1219 chr3L 925176 925209 chr3L 932603 932636 mdg1 5 7427 2.0 4.5 3.2 1.2 7460 chr3L 925176 intron Glut1 + chr3L 928906 intron Glut1 + chr3L 932636 intron Glut1 + chr3L_5_925001 chr3L_925001 RC1_1-HE 1220 chr3L 937914 937938 chr3L 938036 938060 10 121 5.5 5.0 5.2 1.6 146 chr3L 937914 intron Glut1 + chr3L 937987 intron Glut1 + chr3L 938060 intron Glut1 + chr3L_10_935001 chr3L_935001 RC1_1-HE 1221 chr3L 939767 939783 chr3L 940889 940905 jockey 6 1122 6.5 6.5 6.5 0.8 1138 chr3L 939767 intron Glut1 + chr3L 940336 intron Glut1 + chr3L 940905 intron Glut1 + chr3L_6_940001 chr3L_940001 RC1_1-HE 1222 chr3L 939787 939800 chr3L 940888 940922 jockey 8 1119 5.5 6.0 5.8 1.2 1135 chr3L 939787 intron Glut1 + chr3L 940354 intron Glut1 + chr3L 940922 intron Glut1 + chr3L_8_940001 chr3L_940001 RC1_1-HE 1223 chr3L 950902 950933 chr3L 950988 951019 10 86 5.0 3.0 4.0 2.0 117 chr3L 950902 intron Glut1 + chr3L 950960 5` UTR Glut1 + chr3L 951019 5` UTR Glut1 + chr3L_10_950001 chr3L_950001 RC1_1-HE 1224 chr3L 962419 962453 chr3L 962642 962676 14 223 2.0 5.0 3.5 3.1 257 chr3L 962419 intron Glut1 + chr3L 962548 intron Glut1 + chr3L 962676 intron Glut1 + chr3L_14_960001 chr3L_960001 RC1_1-HE 1225 chr3L 970965 970980 chr3L 971051 971066 7 85 14.0 11.0 12.5 0.5 101 chr3L 970965 intron Glut1 + chr3L 971016 intron Glut1 + chr3L 971066 intron Glut1 + chr3L_7_970001 chr3L_970001 RC1_1-HE 1226 chr3L 1009070 1009083 chr3L 1009164 1009177 4 94 0.0 2.0 1.0 2.0 107 chr3L 1009070 intron trio - chr3L 1009124 intron trio - chr3L 1009177 intron trio - chr3L_4_1005001 chr3L_1005001 RC1_1-HE 1227 chr3L 1010363 1010397 chr3L 1010440 1010474 15 77 2.5 2.5 2.5 4.3 111 chr3L 1010363 intron trio - chr3L 1010418 intron trio - chr3L 1010474 intron trio - chr3L_15_1010001 chr3L_1010001 RC1_1-HE 1228 chr3L 1057099 1057131 chr3L 1057177 1057209 14 78 4.0 4.0 4.0 2.8 110 chr3L 1057099 intron bab1 - chr3L 1057154 intron bab1 - chr3L 1057209 intron bab1 - chr3L_14_1055001 chr3L_1055001 RC1_1-HE 1229 chr3L 1109632 1109661 chr3L 1109721 1109750 14 87 5.5 5.0 5.2 2.3 118 chr3L 1109632 intergenic not near genes chr3L 1109691 intergenic not near genes chr3L 1109750 intergenic not near genes chr3L_14_1105001 chr3L_1105001 RC1_1-HE 1230 chr3L 1145240 1145250 chr3L 1145320 1145330 4 80 3.5 0.0 1.8 1.4 90 chr3L 1145240 intron bab2 - chr3L 1145285 intron bab2 - chr3L 1145330 intron bab2 - chr3L_4_1145001 chr3L_1145001 RC1_1-HE 1231 chr3L 1154130 1154151 chr3L 1163281 1163302 roo 5 9151 6.0 0.5 3.2 1.2 9172 chr3L 1154130 intron bab2 - chr3L 1158716 intron bab2 - chr3L 1163302 intron bab2 - chr3L_5_1155001 chr3L_1155001 RC1_1-HE 1232 chr3L 1219603 1219624 chr3L 1227337 1227358 412 5 7734 3.0 4.5 3.8 1.0 7755 chr3L 1219603 intron mwh + chr3L 1223480 intron mwh + chr3L 1227358 intron mwh + chr3L_5_1220001 chr3L_1220001 RC1_1-HE 1233 chr3L 1260141 1260163 chr3L 1260222 1260244 12 81 3.5 4.5 4.0 2.4 103 chr3L 1260141 intron CG9134 + chr3L 1260192 intron CG9134 + chr3L 1260244 intron CG9134 + chr3L_12_1260001 chr3L_1260001 RC1_1-HE 1234 chr3L 1310984 1311013 chr3L 1315843 1315872 17 4859 29.0 29.0 29.0 0.6 4888 chr3L 1310984 exon CG2469 + chr3L 1313428 intergenic CG9186 -,CG9153 + chr3L 1315872 exon CG9153 + chr3L_17_1310001 chr3L_1310001 RC1_1-HE 1235 chr3L 1364050 1364066 chr3L 1364137 1364153 7 87 0.5 10.0 5.2 1.1 103 chr3L 1364050 intron Ptp61F - chr3L 1364102 intron Ptp61F - chr3L 1364153 intron Ptp61F - chr3L_7_1360001 chr3L_1360001 RC1_1-HE 1236 chr3L 1375670 1375704 chr3L 1375752 1375786 9 82 2.0 5.0 3.5 2.0 116 chr3L 1375670 intron,intron Ptp61F -,ru + chr3L 1375728 intron,intron Ptp61F -,ru + chr3L 1375786 intron,intron Ptp61F -,ru + chr3L_9_1375001 chr3L_1375001 RC1_1-HE 1237 chr3L 1415776 1415807 chr3L 1415859 1415890 11 83 3.5 9.0 6.2 1.5 114 chr3L 1415776 intron Ptp61F - chr3L 1415833 intron Ptp61F - chr3L 1415890 intron Ptp61F - chr3L_11_1415001 chr3L_1415001 RC1_1-HE 1238 chr3L 1505994 1506030 chr3L 1513592 1513628 17.6 23 7598 2.5 6.0 4.2 4.4 7634 chr3L 1505994 intron,intron Psa +,cue - chr3L 1509811 intron,intron Psa +,cue - chr3L 1513628 intron,intron Psa +,cue - chr3L_23_1505001 chr3L_1505001 RC1_1-HE 1239 chr3L 1536858 1536886 chr3L 1536941 1536971 6 84 3.5 5.0 4.2 1.2 113 chr3L 1536858 intergenic CG12091 -,CG7852 + chr3L 1536914 intergenic CG12091 -,CG7852 + chr3L 1536971 intergenic CG12091 -,CG7852 + chr3L_6_1535001 chr3L_1535001 RC1_1-HE 1240 chr3L 1571471 1571495 chr3L 1571556 1571581 6 86 2.5 5.0 3.8 1.2 110 chr3L 1571471 intron CG12004 + chr3L 1571526 intron CG12004 + chr3L 1571581 intron CG12004 + chr3L_6_1570001 chr3L_1570001 RC1_1-HE 1241 chr3L 1662254 1662284 chr3L 1662339 1662377 11 89 6.5 6.5 6.5 1.5 123 chr3L 1662254 exon CG7971 - chr3L 1662316 exon CG7971 - chr3L 1662377 exon CG7971 - chr3L_11_1660001 chr3L_1660001 RC1_1-HE 1242 chr3L 1693523 1693534 chr3L 1693613 1693624 5 90 0.5 11.0 5.8 0.7 101 chr3L 1693523 intron CG7991 + chr3L 1693574 intron CG7991 + chr3L 1693624 intron CG7991 + chr3L_5_1690001 chr3L_1690001 RC1_1-HE 1243 chr3L 1704370 1704391 chr3L 1704453 1704458 9 79 3.0 0.5 1.8 3.2 88 chr3L 1704370 intron CG7991 + chr3L 1704414 intron CG7991 + chr3L 1704458 intron CG7991 + chr3L_9_1700001 chr3L_1700001 RC1_1-HE 1244 chr3L 1708851 1708875 chr3L 1709086 1709110 7 234 2.5 2.0 2.2 2.2 259 chr3L 1708851 intron CG7991 + chr3L 1708980 intron CG7991 + chr3L 1709110 intron CG7991 + chr3L_7_1705001 chr3L_1705001 RC1_1-HE 1245 chr3L 1726637 1726646 chr3L 1726718 1726727 6 81 2.0 3.0 2.5 1.7 90 chr3L 1726637 intron drpr - chr3L 1726682 intron drpr - chr3L 1726727 intron drpr - chr3L_6_1725001 chr3L_1725001 RC1_1-HE 1246 chr3L 1740851 1740882 chr3L 1741097 1741128 pogo 9 244 2.0 1.5 1.8 3.2 277 chr3L 1740851 intron Gk + chr3L 1740990 intron Gk + chr3L 1741128 intron Gk + chr3L_9_1740001 chr3L_1740001 RC1_1-HE 1247 chr3L 1866653 1866681 chr3L 1866740 1866768 9 87 3.5 3.5 3.5 2.0 115 chr3L 1866653 intron CG12025 + chr3L 1866710 intron CG12025 + chr3L 1866768 intron CG12025 + chr3L_9_1865001 chr3L_1865001 RC1_1-HE 1248 chr3L 1979071 1979105 chr3L 1979271 1979305 23 200 5.0 4.0 4.5 4.2 234 chr3L 1979071 intergenic not near genes chr3L 1979188 intergenic not near genes chr3L 1979305 intergenic not near genes chr3L_23_1975001 chr3L_1975001 RC1_1-HE 1249 chr3L 1988842 1988874 chr3L 1989022 1989054 9 179 3.0 3.5 3.2 2.1 212 chr3L 1988842 intergenic not near genes chr3L 1988948 intergenic not near genes chr3L 1989054 intergenic not near genes chr3L_9_1985001 chr3L_1985001 RC1_1-HE 1250 chr3L 2199808 2199821 chr3L 2199885 2199898 6 77 3.0 5.0 4.0 1.2 90 chr3L 2199808 intergenic not near genes chr3L 2199853 intergenic not near genes chr3L 2199898 intergenic not near genes chr3L_6_2195001 chr3L_2195001 RC1_1-HE 1251 chr3L 2204923 2204956 chr3L 2205005 2205037 8 80 3.5 3.5 3.5 1.8 114 chr3L 2204923 intergenic not near genes chr3L 2204980 intergenic not near genes chr3L 2205037 intergenic not near genes chr3L_8_2200001 chr3L_2200001 RC1_1-HE 1252 chr3L 2282987 2283024 chr3L 2283064 2283101 7 77 4.5 3.5 4.0 1.4 114 chr3L 2282987 5` UTR MsR2 + chr3L 2283044 5` UTR MsR2 + chr3L 2283101 5` UTR MsR2 + chr3L_7_2280001 chr3L_2280001 RC1_1-HE 1253 chr3L 2293389 2293424 chr3L 2293470 2293505 18 78 7.0 6.0 6.5 2.4 116 chr3L 2293389 intron MsR2 + chr3L 2293447 intron MsR2 + chr3L 2293505 intron MsR2 + chr3L_18_2290001 chr3L_2290001 RC1_1-HE 1254 chr3L 2312624 2312651 chr3L 2312744 2312771 13 120 6.0 0.0 3.0 3.2 147 chr3L 2312624 intergenic not near genes chr3L 2312698 intergenic not near genes chr3L 2312771 intergenic not near genes chr3L_13_2310001 chr3L_2310001 RC1_1-HE 1255 chr3L 2314432 2314459 chr3L 2314511 2314538 15 79 5.5 0.0 2.8 3.9 106 chr3L 2314432 intergenic not near genes chr3L 2314485 intergenic not near genes chr3L 2314538 intergenic not near genes chr3L_15_2310001 chr3L_2310001 RC1_1-HE 1256 chr3L 2333649 2333939 chr3L 2333869 2334018 27 141 5.0 8.0 6.5 3.6 369 chr3L 2333649 intron MsR1 + chr3L 2333834 intron MsR1 + chr3L 2334018 intron MsR1 + chr3L_27_2330001 chr3L_2330001 RC1_1-HE 1257 chr3L 2447505 2447538 chr3L 2456662 2456695 roo 7 9157 2.5 3.5 3.0 1.8 9190 chr3L 2447505 intron CG45186 + chr3L 2452100 intron CG45186 + chr3L 2456695 intron CG45186 + chr3L_7_2450001 chr3L_2450001 RC1_1-HE 1258 chr3L 2483150 2483160 chr3L 2483230 2483240 4 80 2.5 4.5 3.5 0.9 90 chr3L 2483150 intron CG45186 + chr3L 2483195 intron CG45186 + chr3L 2483240 intron CG45186 + chr3L_4_2480001 chr3L_2480001 RC1_1-HE 1259 chr3L 2516930 2516969 chr3L 2517018 2517057 22 87 4.5 4.5 4.5 4.0 127 chr3L 2516930 intron Spn - chr3L 2516994 intron Spn - chr3L 2517057 intron Spn - chr3L_22_2515001 chr3L_2515001 RC1_1-HE 1260 chr3L 2518242 2518266 chr3L 2518322 2518346 12 80 6.0 1.5 3.8 2.5 104 chr3L 2518242 intron,intron Spn -,CR45170 + chr3L 2518294 intron,intron Spn -,CR45170 + chr3L 2518346 intron,5` UTR Spn -,CR45170 + chr3L_12_2515001 chr3L_2515001 RC1_1-HE 1261 chr3L 2533650 2533665 chr3L 2533733 2533748 6 83 10.0 16.5 13.2 0.4 98 chr3L 2533650 intron Spn - chr3L 2533699 intron Spn - chr3L 2533748 intron Spn - chr3L_6_2530001 chr3L_2530001 RC1_1-HE 1262 chr3L 2533666 2533682 chr3L 2533729 2533765 16 78 7.0 12.0 9.5 1.5 99 chr3L 2533666 intron Spn - chr3L 2533716 intron Spn - chr3L 2533765 intron Spn - chr3L_16_2530001 chr3L_2530001 RC1_1-HE 1263 chr3L 2546760 2546794 chr3L 2546850 2546880 5 89 7.5 2.0 4.8 0.9 120 chr3L 2546760 intron Spn - chr3L 2546820 intron Spn - chr3L 2546880 intron Spn - chr3L_5_2545001 chr3L_2545001 RC1_1-HE 1264 chr3L 2554316 2554338 chr3L 2554394 2554416 11 78 3.5 1.5 2.5 3.1 100 chr3L 2554316 intergenic Spn - chr3L 2554366 intergenic Spn -,msn - chr3L 2554416 intergenic Spn -,msn - chr3L_11_2550001 chr3L_2550001 RC1_1-HE 1265 chr3L 2570998 2571032 chr3L 2571084 2571118 25 86 10.0 5.5 7.8 2.8 120 chr3L 2570998 intron msn - chr3L 2571058 intron msn - chr3L 2571118 intron msn - chr3L_25_2570001 chr3L_2570001 RC1_1-HE 1266 chr3L 2580197 2580230 chr3L 2580640 2580673 17 442 5.0 4.0 4.5 3.1 476 chr3L 2580197 intron msn - chr3L 2580435 intron msn - chr3L 2580673 intron msn - chr3L_17_2580001 chr3L_2580001 RC1_1-HE 1267 chr3L 2581899 2581915 chr3L 2581994 2582010 6 95 5.0 2.0 3.5 1.3 111 chr3L 2581899 intron msn - chr3L 2581954 intron msn - chr3L 2582010 intron msn - chr3L_6_2580001 chr3L_2580001 RC1_1-HE 1268 chr3L 2678112 2678145 chr3L 2678193 2678226 17 81 4.5 7.5 6.0 2.4 114 chr3L 2678112 intron Fife - chr3L 2678169 intron Fife - chr3L 2678226 intron Fife - chr3L_17_2675001 chr3L_2675001 RC1_1-HE 1269 chr3L 2683947 2683979 chr3L 2684024 2684056 11 77 4.5 3.0 3.8 2.3 109 chr3L 2683947 intron Fife - chr3L 2684002 intron Fife - chr3L 2684056 intron Fife - chr3L_11_2680001 chr3L_2680001 RC1_1-HE 1270 chr3L 2719550 2719559 chr3L 2719653 2719662 4 103 6.5 3.0 4.8 0.7 112 chr3L 2719550 3` UTR Mrtf - chr3L 2719606 3` UTR Mrtf - chr3L 2719662 3` UTR Mrtf - chr3L_4_2715001 chr3L_2715001 RC1_1-HE 1271 chr3L 2724950 2724977 chr3L 2725036 2725063 12 82 2.5 1.5 2.0 4.0 113 chr3L 2724950 intron Mrtf - chr3L 2725006 intron Mrtf - chr3L 2725063 intron Mrtf - chr3L_12_2725001 chr3L_2725001 RC1_1-HE 1272 chr3L 2731513 2731549 chr3L 2731596 2731632 19 83 2.5 2.0 2.2 5.9 119 chr3L 2731513 intron Mrtf - chr3L 2731572 intron Mrtf - chr3L 2731632 intron Mrtf - chr3L_19_2730001 chr3L_2730001 RC1_1-HE 1273 chr3L 2736319 2736332 chr3L 2736400 2736413 6 81 2.0 0.0 1.0 3.0 94 chr3L 2736319 intron Mrtf - chr3L 2736366 intron Mrtf - chr3L 2736413 intron Mrtf - chr3L_6_2735001 chr3L_2735001 RC1_1-HE 1274 chr3L 2751448 2751460 chr3L 2755744 2755756 F-element 4 4296 9.0 3.0 6.0 0.6 4308 chr3L 2751448 intron Mrtf - chr3L 2753602 intron Mrtf - chr3L 2755756 intron Mrtf - chr3L_4_2750001 chr3L_2750001 RC1_1-HE 1275 chr3L 2863796 2863822 chr3L 2863877 2863903 7 80 2.0 0.0 1.0 3.5 107 chr3L 2863796 intron CG43444 - chr3L 2863850 intron CG43444 - chr3L 2863903 intron CG43444 - chr3L_7_2860001 chr3L_2860001 RC1_1-HE 1276 chr3L 2897411 2897428 chr3L 2897522 2897539 11 111 3.5 3.0 3.2 2.6 128 chr3L 2897411 5` UTR Shab + chr3L 2897475 intron Shab + chr3L 2897539 intron Shab + chr3L_11_2895001 chr3L_2895001 RC1_1-HE 1277 chr3L 2899576 2899604 chr3L 2899690 2899718 9 114 7.5 2.0 4.8 1.6 142 chr3L 2899576 intron Shab + chr3L 2899647 intron Shab + chr3L 2899718 intron Shab + chr3L_9_2895001 chr3L_2895001 RC1_1-HE 1278 chr3L 2910114 2910120 chr3L 18097006 18097012 6 15186892 5.0 19.0 12.0 0.5 15186898 chr3L 2910114 intron Shab + chr3L 10503563 intron A2bp1 + chr3L 18097012 intron CG13698 - chr3L_6_10500001 chr3L_10500001 RC1_1-HE 1279 chr3L 2927837 2927872 chr3L 2936115 2936149 Tirant 21 8277 4.0 6.5 5.2 3.4 8312 chr3L 2927837 intron Shab + chr3L 2931993 intron Shab + chr3L 2936149 intron Shab + chr3L_21_2930001 chr3L_2930001 RC1_1-HE 1280 chr3L 2983293 2983314 chr3L 2983376 2983397 7 83 6.0 0.5 3.2 1.7 104 chr3L 2983293 exon CG2107 + chr3L 2983345 3` UTR CG2107 + chr3L 2983397 3` UTR CG2107 + chr3L_7_2980001 chr3L_2980001 RC1_1-HE 1281 chr3L 3061283 3061296 chr3L 3069867 3069880 Tirant 6 8581 11.0 4.5 7.8 0.7 8597 chr3L 3061283 intron CG32486 - chr3L 3065582 intron CG32486 - chr3L 3069880 intron CG32486 - chr3L_6_3065001 chr3L_3065001 RC1_1-HE 1282 chr3L 3061297 3061316 chr3L 3069866 3069900 Tirant 16 8582 6.0 4.5 5.2 2.6 8603 chr3L 3061297 intron CG32486 - chr3L 3065598 intron CG32486 - chr3L 3069900 intron CG32486 - chr3L_16_3065001 chr3L_3065001 RC1_1-HE 1283 chr3L 3103454 3103465 chr3L 3103531 3103542 4 77 4.5 3.5 4.0 0.8 88 chr3L 3103454 intron Cht7 - chr3L 3103498 intron Cht7 - chr3L 3103542 intron Cht7 - chr3L_4_3100001 chr3L_3100001 RC1_1-HE 1284 chr3L 3136635 3136670 chr3L 3136725 3136760 12 90 4.5 0.5 2.5 3.4 125 chr3L 3136635 intron CG11537 - chr3L 3136698 intron CG11537 - chr3L 3136760 intron CG11537 - chr3L_12_3135001 chr3L_3135001 RC1_1-HE 1285 chr3L 3252348 3252369 chr3L 3252425 3252446 6 77 1.5 7.0 4.2 1.2 98 chr3L 3252348 5` UTR CR43626 + chr3L 3252397 5` UTR CR43626 + chr3L 3252446 5` UTR CR43626 + chr3L_6_3250001 chr3L_3250001 RC1_1-HE 1286 chr3L 3281435 3281475 chr3L 3281931 3281972 Doc 11 497 2.5 8.0 5.2 1.8 537 chr3L 3281435 intron CG12017 + chr3L 3281704 intron CG12017 + chr3L 3281972 intron CG12017 + chr3L_11_3280001 chr3L_3280001 RC1_1-HE 1287 chr3L 3290898 3290925 chr3L 3290975 3291002 11 77 3.0 4.0 3.5 2.4 104 chr3L 3290898 intergenic CG12017 + chr3L 3290950 intergenic CG12017 + chr3L 3291002 intergenic CG12017 +,CG12009 + chr3L_11_3290001 chr3L_3290001 RC1_1-HE 1288 chr3L 3314365 3314368 chr3L 3314970 3315005 6 610 21.0 13.5 17.2 0.3 640 chr3L 3314365 5` UTR Drsl2 + chr3L 3314685 intergenic Drsl2 +,Drsl3 + chr3L 3315005 5` UTR Drsl3 + chr3L_6_3310001 chr3L_3310001 RC1_1-HE 1289 chr3L 3317531 3317566 chr3L 3317610 3317631 24 79 3.0 3.5 3.2 5.7 100 chr3L 3317531 intergenic Drsl5 +,PIG-C - chr3L 3317581 intergenic Drsl5 +,PIG-C - chr3L 3317631 intergenic PIG-C -,Drsl5 + chr3L_24_3315001 chr3L_3315001 RC1_1-HE 1290 chr3L 3317927 3317953 chr3L 3337105 3337131 9 19178 13.5 12.5 13.0 0.6 19204 chr3L 3317927 intergenic PIG-C - chr3L 3327529 intron,intron CG11526 -,PHGPx + chr3L 3337131 intron kst + chr3L_9_3325001 chr3L_3325001 RC1_1-HE 1291 chr3L 3429953 3429985 chr3L 3430030 3430062 17 76 1.0 2.5 1.8 6.1 109 chr3L 3429953 intron eIF5B - chr3L 3430008 intron eIF5B - chr3L 3430062 intron eIF5B - chr3L_17_3430001 chr3L_3430001 RC1_1-HE 1292 chr3L 3433336 3433354 chr3L 3433588 3433594 12 251 4.0 2.0 3.0 3.0 258 chr3L 3433336 intron eIF5B - chr3L 3433465 intron eIF5B - chr3L 3433594 intron eIF5B - chr3L_12_3430001 chr3L_3430001 RC1_1-HE 1293 chr3L 3437787 3437808 chr3L 3437996 3438016 12 209 3.0 5.5 4.2 2.3 229 chr3L 3437787 intron eIF5B - chr3L 3437902 intron eIF5B - chr3L 3438016 intron eIF5B - chr3L_12_3435001 chr3L_3435001 RC1_1-HE 1294 chr3L 3475078 3475113 chr3L 3475523 3475558 jockey 13 445 1.0 4.0 2.5 3.7 480 chr3L 3475078 intron CG42324 + chr3L 3475318 intron CG42324 + chr3L 3475558 intron CG42324 + chr3L_13_3475001 chr3L_3475001 RC1_1-HE 1295 chr3L 3494196 3494208 chr3L 3494274 3494286 11 77 6.5 5.0 5.8 1.6 90 chr3L 3494196 intron CG42324 + chr3L 3494241 intron CG42324 + chr3L 3494286 intron CG42324 + chr3L_11_3490001 chr3L_3490001 RC1_1-HE 1296 chr3L 3501642 3501664 chr3L 3501720 3501742 15 78 6.5 0.0 3.2 3.6 100 chr3L 3501642 intron CG42324 + chr3L 3501692 intron CG42324 + chr3L 3501742 intron CG42324 + chr3L_15_3500001 chr3L_3500001 RC1_1-HE 1297 chr3L 3503971 3503984 chr3L 3504079 3504092 8 108 0.0 1.5 0.8 4.4 121 chr3L 3503971 intron CG42324 + chr3L 3504032 intron CG42324 + chr3L 3504092 intron CG42324 + chr3L_8_3500001 chr3L_3500001 RC1_1-HE 1298 chr3L 3523827 3523861 chr3L 3523918 3523951 11 88 2.5 1.5 2.0 3.7 124 chr3L 3523827 intron Eip63E + chr3L 3523889 intron Eip63E + chr3L 3523951 intron Eip63E + chr3L_11_3520001 chr3L_3520001 RC1_1-HE 1299 chr3L 3542768 3542786 chr3L 3542853 3542871 8 85 6.5 5.0 5.8 1.2 103 chr3L 3542768 intron Eip63E + chr3L 3542820 intron Eip63E + chr3L 3542871 intron Eip63E + chr3L_8_3540001 chr3L_3540001 RC1_1-HE 1300 chr3L 3544389 3544416 chr3L 3544500 3544527 15 111 0.5 7.5 4.0 3.0 138 chr3L 3544389 intron Eip63E + chr3L 3544458 intron Eip63E + chr3L 3544527 intron Eip63E + chr3L_15_3540001 chr3L_3540001 RC1_1-HE 1301 chr3L 3573167 3573193 chr3L 3573251 3573277 18 84 7.0 6.0 6.5 2.4 110 chr3L 3573167 intron Eip63E + chr3L 3573222 intron Eip63E + chr3L 3573277 intron Eip63E + chr3L_18_3570001 chr3L_3570001 RC1_1-HE 1302 chr3L 3581764 3581777 chr3L 3581850 3581863 6 86 1.5 9.5 5.5 0.9 99 chr3L 3581764 intron Eip63E + chr3L 3581814 intron Eip63E + chr3L 3581863 intron Eip63E + chr3L_6_3580001 chr3L_3580001 RC1_1-HE 1303 chr3L 3601297 3601329 chr3L 3606609 3606641 copia 6 5312 3.0 2.5 2.8 1.6 5344 chr3L 3601297 intron Eip63E + chr3L 3603969 intron Eip63E + chr3L 3606641 intron Eip63E + chr3L_6_3600001 chr3L_3600001 RC1_1-HE 1304 chr3L 3709458 3709462 chr3L 3709541 3709545 5 83 3.0 6.0 4.5 0.9 87 chr3L 3709458 intergenic CR45675 + chr3L 3709502 intergenic not near genes chr3L 3709545 intergenic not near genes chr3L_5_3705001 chr3L_3705001 RC1_1-HE 1305 chr3L 3729730 3729764 chr3L 3729807 3729847 14 78 5.0 0.5 2.8 3.7 117 chr3L 3729730 intron CG32264 - chr3L 3729788 intron CG32264 - chr3L 3729847 intron CG32264 - chr3L_14_3725001 chr3L_3725001 RC1_1-HE 1306 chr3L 3773628 3773632 chr3L 3773708 3773712 4 80 5.0 4.0 4.5 0.7 84 chr3L 3773628 intron CG32264 - chr3L 3773670 intron CG32264 - chr3L 3773712 intron CG32264 - chr3L_4_3770001 chr3L_3770001 RC1_1-HE 1307 chr3L 3783272 3783286 chr3L 3783350 3783364 6 78 2.0 4.0 3.0 1.5 92 chr3L 3783272 intron CG32264 - chr3L 3783318 intron CG32264 - chr3L 3783364 intron CG32264 - chr3L_6_3780001 chr3L_3780001 RC1_1-HE 1308 chr3L 3833737 3833767 chr3L 3833979 3834009 pogo 12 242 4.5 4.5 4.5 2.2 272 chr3L 3833737 intron enc + chr3L 3833873 intron enc + chr3L 3834009 intron enc + chr3L_12_3830001 chr3L_3830001 RC1_1-HE 1309 chr3L 3877457 3877460 chr3L 3877581 3877584 4 124 0.0 4.0 2.0 1.3 127 chr3L 3877457 intergenic not near genes chr3L 3877520 intergenic not near genes chr3L 3877584 intergenic not near genes chr3L_4_3875001 chr3L_3875001 RC1_1-HE 1310 chr3L 3910958 3910989 chr3L 3911047 3911078 5 89 1.5 1.0 1.2 2.3 120 chr3L 3910958 intergenic not near genes chr3L 3911018 intergenic not near genes chr3L 3911078 intergenic not near genes chr3L_5_3910001 chr3L_3910001 RC1_1-HE 1311 chr3L 3950346 3950380 chr3L 3950462 3950496 10 116 3.5 2.5 3.0 2.5 150 chr3L 3950346 intergenic not near genes chr3L 3950421 intergenic not near genes chr3L 3950496 intergenic not near genes chr3L_10_3950001 chr3L_3950001 RC1_1-HE 1312 chr3L 3975000 3975025 chr3L 3975140 3975165 19 140 11.0 7.5 9.2 1.9 165 chr3L 3975000 intergenic not near genes chr3L 3975082 intergenic not near genes chr3L 3975165 intergenic not near genes chr3L_19_3975001 chr3L_3975001 RC1_1-HE 1313 chr3L 4001549 4001580 chr3L 4001650 4001682 8 102 4.0 0.0 2.0 2.7 133 chr3L 4001549 intergenic not near genes chr3L 4001616 intergenic not near genes chr3L 4001682 intergenic not near genes chr3L_8_4000001 chr3L_4000001 RC1_1-HE 1314 chr3L 4054285 4054312 chr3L 4054376 4054403 9 91 1.5 0.0 0.8 5.0 118 chr3L 4054285 intron CG1136 + chr3L 4054344 intron CG1136 + chr3L 4054403 intron CG1136 + chr3L_9_4050001 chr3L_4050001 RC1_1-HE 1315 chr3L 4054894 4054920 chr3L 4054972 4054998 7 78 2.0 2.5 2.2 2.2 104 chr3L 4054894 intron CG1136 + chr3L 4054946 intron CG1136 + chr3L 4054998 intron CG1136 + chr3L_7_4050001 chr3L_4050001 RC1_1-HE 1316 chr3L 4092991 4093008 chr3L 4093102 4093119 11 111 2.5 8.5 5.5 1.7 128 chr3L 4092991 intergenic CG14990 +,CG14989 + chr3L 4093055 intergenic CG14990 +,CG14989 + chr3L 4093119 intergenic CG14990 +,CG14989 + chr3L_11_4090001 chr3L_4090001 RC1_1-HE 1317 chr3L 4098591 4098595 chr3L 4098698 4098702 5 107 4.5 7.5 6.0 0.7 111 chr3L 4098591 intron CG14995 - chr3L 4098646 intron CG14995 - chr3L 4098702 intron CG14995 - chr3L_5_4095001 chr3L_4095001 RC1_1-HE 1318 chr3L 4099758 4099772 chr3L 4099846 4099860 9 88 5.0 4.0 4.5 1.6 102 chr3L 4099758 intron CG14995 - chr3L 4099809 intron CG14995 - chr3L 4099860 intron CG14995 - chr3L_9_4095001 chr3L_4095001 RC1_1-HE 1319 chr3L 4133412 4133447 chr3L 4133501 4133536 37 89 8.0 5.0 6.5 4.9 124 chr3L 4133412 intron ens - chr3L 4133474 intron ens - chr3L 4133536 intron ens - chr3L_37_4130001 chr3L_4130001 RC1_1-HE 1320 chr3L 4146821 4146841 chr3L 4146904 4146924 7 83 0.0 0.5 0.2 5.8 103 chr3L 4146821 intergenic not near genes chr3L 4146872 intergenic not near genes chr3L 4146924 intergenic not near genes chr3L_7_4145001 chr3L_4145001 RC1_1-HE 1321 chr3L 4210917 4210942 chr3L 4210998 4211023 8 79 5.0 4.0 4.5 1.5 106 chr3L 4210917 intron,3` UTR CG43367 +,Cpr64Ab - chr3L 4210970 intron,3` UTR CG43367 +,Cpr64Ab - chr3L 4211023 intron,exon CG43367 +,Cpr64Ab - chr3L_8_4210001 chr3L_4210001 RC1_1-HE 1322 chr3L 4233092 4233115 chr3L 4233181 4233204 9 89 1.5 3.0 2.2 2.8 112 chr3L 4233092 intron ImpL2 - chr3L 4233148 intron ImpL2 - chr3L 4233204 intron ImpL2 - chr3L_9_4230001 chr3L_4230001 RC1_1-HE 1323 chr3L 4328736 4328765 chr3L 4336235 4336264 412 14 7499 3.0 4.5 3.8 2.9 7528 chr3L 4328736 intron Cip4 - chr3L 4332500 intron Cip4 - chr3L 4336264 intron Cip4 - chr3L_14_4330001 chr3L_4330001 RC1_1-HE 1324 chr3L 4346452 4346464 chr3L 4346533 4346545 5 81 6.0 6.5 6.2 0.7 93 chr3L 4346452 intron,intron Cip4 -,CR45156 + chr3L 4346498 intron,intron Cip4 -,CR45156 + chr3L 4346545 intron,intron Cip4 -,CR45156 + chr3L_5_4345001 chr3L_4345001 RC1_1-HE 1325 chr3L 4346469 4346593 chr3L 4346529 4346683 19 85 6.5 6.0 6.2 2.6 214 chr3L 4346469 intron,intron Cip4 -,CR45156 + chr3L 4346576 intron,intron Cip4 -,CR45156 + chr3L 4346683 intron,intron Cip4 -,CR45156 + chr3L_19_4345001 chr3L_4345001 RC1_1-HE 1326 chr3L 4390031 4390035 chr3L 4390111 4390115 4 80 0.0 3.0 1.5 1.6 84 chr3L 4390031 intron slow + chr3L 4390073 intron slow + chr3L 4390115 intron slow + chr3L_4_4390001 chr3L_4390001 RC1_1-HE 1327 chr3L 4399629 4399662 chr3L 4399722 4399755 10 93 2.0 1.0 1.5 4.0 126 chr3L 4399629 intron slow + chr3L 4399692 intron slow + chr3L 4399755 intron slow + chr3L_10_4395001 chr3L_4395001 RC1_1-HE 1328 chr3L 4503908 4503932 chr3L 4503986 4504010 15 78 4.5 0.0 2.2 4.7 102 chr3L 4503908 intron NT1 - chr3L 4503959 intron NT1 - chr3L 4504010 intron NT1 - chr3L_15_4500001 chr3L_4500001 RC1_1-HE 1329 chr3L 4597213 4597247 chr3L 4597296 4597330 9 83 3.5 4.5 4.0 1.8 117 chr3L 4597213 intron Src64B - chr3L 4597272 intron Src64B - chr3L 4597330 intron Src64B - chr3L_9_4595001 chr3L_4595001 RC1_1-HE 1330 chr3L 4607277 4607292 chr3L 4607369 4607384 8 92 3.0 5.5 4.2 1.5 107 chr3L 4607277 intron Src64B - chr3L 4607330 intron Src64B - chr3L 4607384 intron Src64B - chr3L_8_4605001 chr3L_4605001 RC1_1-HE 1331 chr3L 4636894 4637114 chr3L 4636973 4637193 21 78 3.5 6.5 5.0 3.5 299 chr3L 4636894 intron axo - chr3L 4637044 intron axo - chr3L 4637193 intron axo - chr3L_21_4635001 chr3L_4635001 RC1_1-HE 1332 chr3L 4673402 4673407 chr3L 4673504 4673509 4 102 4.5 0.5 2.5 1.1 107 chr3L 4673402 intron axo - chr3L 4673456 intron axo - chr3L 4673509 intron axo - chr3L_4_4670001 chr3L_4670001 RC1_1-HE 1333 chr3L 4786320 4786346 chr3L 4786533 4786556 8 213 3.0 3.0 3.0 2.0 236 chr3L 4786320 intron RhoGEF64C + chr3L 4786438 intron RhoGEF64C + chr3L 4786556 intron RhoGEF64C + chr3L_8_4785001 chr3L_4785001 RC1_1-HE 1334 chr3L 4797628 4797653 chr3L 4797708 4797733 8 80 1.5 6.0 3.8 1.7 105 chr3L 4797628 intergenic not near genes chr3L 4797680 intergenic not near genes chr3L 4797733 intergenic not near genes chr3L_8_4795001 chr3L_4795001 RC1_1-HE 1335 chr3L 4805105 4805126 chr3L 4805318 4805339 7 213 24.0 13.0 18.5 0.4 234 chr3L 4805105 exon CG7509 - chr3L 4805222 exon CG7509 - chr3L 4805339 intergenic CG7509 - chr3L_7_4805001 chr3L_4805001 RC1_1-HE 1336 chr3L 4839592 4839620 chr3L 4839674 4839702 13 82 4.5 1.0 2.8 3.4 110 chr3L 4839592 intron CG13707 - chr3L 4839647 intron CG13707 - chr3L 4839702 intron CG13707 - chr3L_13_4835001 chr3L_4835001 RC1_1-HE 1337 chr3L 4840408 4840421 chr3L 4840517 4840531 5 110 2.0 0.0 1.0 2.5 123 chr3L 4840408 intergenic CG13707 - chr3L 4840470 intergenic CG13707 - chr3L 4840531 intergenic CG13707 - chr3L_5_4840001 chr3L_4840001 RC1_1-HE 1338 chr3L 4901125 4901148 chr3L 4907316 4907339 diver 6 6191 2.0 0.0 1.0 3.0 6214 chr3L 4901125 intergenic CG13704 + chr3L 4904232 intergenic not near genes chr3L 4907339 intergenic not near genes chr3L_6_4900001 chr3L_4900001 RC1_1-HE 1339 chr3L 4907936 4907963 chr3L 4908040 4908067 7 104 2.5 0.0 1.2 3.2 131 chr3L 4907936 intergenic not near genes chr3L 4908002 intergenic not near genes chr3L 4908067 intergenic not near genes chr3L_7_4905001 chr3L_4905001 RC1_1-HE 1340 chr3L 5045454 5045483 chr3L 5050236 5050265 Doc 7 4782 6.5 6.5 6.5 0.9 4811 chr3L 5045454 intron Con - chr3L 5047860 intron Con - chr3L 5050265 intron Con - chr3L_7_5045001 chr3L_5045001 RC1_1-HE 1341 chr3L 5077125 5077154 chr3L 5077207 5077236 11 81 3.5 4.0 3.8 2.3 111 chr3L 5077125 intron Con - chr3L 5077180 intron Con - chr3L 5077236 intron Con - chr3L_11_5075001 chr3L_5075001 RC1_1-HE 1342 chr3L 5095192 5095226 chr3L 5095307 5095341 18 115 4.5 5.0 4.8 3.1 149 chr3L 5095192 intergenic not near genes chr3L 5095266 intergenic not near genes chr3L 5095341 intergenic not near genes chr3L_18_5095001 chr3L_5095001 RC1_1-HE 1343 chr3L 5103612 5103630 chr3L 5103693 5103711 6 81 3.5 1.0 2.2 1.9 99 chr3L 5103612 intergenic not near genes chr3L 5103662 intergenic not near genes chr3L 5103711 intergenic not near genes chr3L_6_5100001 chr3L_5100001 RC1_1-HE 1344 chr3L 5104484 5104508 chr3L 5124619 5124643 7 20135 2.0 5.0 3.5 1.6 20159 chr3L 5104484 intergenic not near genes chr3L 5114564 intergenic not near genes chr3L 5124643 intergenic not near genes chr3L_7_5110001 chr3L_5110001 RC1_1-HE 1345 chr3L 5126773 5126796 chr3L 5126935 5126958 9 162 3.0 4.0 3.5 2.0 185 chr3L 5126773 intergenic not near genes chr3L 5126866 intergenic not near genes chr3L 5126958 intergenic not near genes chr3L_9_5125001 chr3L_5125001 RC1_1-HE 1346 chr3L 5164638 5164666 chr3L 5164715 5164743 10 77 2.5 2.0 2.2 3.1 105 chr3L 5164638 intron shep - chr3L 5164690 intron shep - chr3L 5164743 intron shep - chr3L_10_5160001 chr3L_5160001 RC1_1-HE 1347 chr3L 5203098 5203112 chr3L 5203204 5203218 9 106 4.0 7.5 5.8 1.3 120 chr3L 5203098 intron shep - chr3L 5203158 intron shep - chr3L 5203218 intron shep - chr3L_9_5200001 chr3L_5200001 RC1_1-HE 1348 chr3L 5251858 5251870 chr3L 5251938 5251950 5 80 0.0 7.5 3.8 1.0 92 chr3L 5251858 intron shep - chr3L 5251904 intron shep - chr3L 5251950 intron shep - chr3L_5_5250001 chr3L_5250001 RC1_1-HE 1349 chr3L 5261165 5261176 chr3L 5261245 5261257 6 80 8.5 4.5 6.5 0.8 92 chr3L 5261165 intron shep - chr3L 5261211 intron shep - chr3L 5261257 intron shep - chr3L_6_5260001 chr3L_5260001 RC1_1-HE 1350 chr3L 5265648 5265668 chr3L 5265734 5265754 10 84 0.0 10.0 5.0 1.7 106 chr3L 5265648 intron shep - chr3L 5265701 intron shep - chr3L 5265754 intron shep - chr3L_10_5265001 chr3L_5265001 RC1_1-HE 1351 chr3L 5410687 5410716 chr3L 5410775 5410804 16 88 3.5 4.0 3.8 3.3 117 chr3L 5410687 intergenic not near genes chr3L 5410746 intergenic not near genes chr3L 5410804 intergenic not near genes chr3L_16_5410001 chr3L_5410001 RC1_1-HE 1352 chr3L 5443004 5443022 chr3L 5443095 5443113 5 91 1.5 0.5 1.0 2.5 109 chr3L 5443004 intergenic not near genes chr3L 5443058 intergenic not near genes chr3L 5443113 intergenic not near genes chr3L_5_5440001 chr3L_5440001 RC1_1-HE 1353 chr3L 5452040 5452065 chr3L 5452138 5452163 12 98 0.0 1.5 0.8 6.7 123 chr3L 5452040 intergenic not near genes chr3L 5452102 intergenic not near genes chr3L 5452163 intergenic not near genes chr3L_12_5450001 chr3L_5450001 RC1_1-HE 1354 chr3L 5498408 5498443 chr3L 5498498 5498533 14 86 1.5 1.5 1.5 5.6 125 chr3L 5498408 exon blanks - chr3L 5498470 exon blanks - chr3L 5498533 exon blanks - chr3L_14_5495001 chr3L_5495001 RC1_1-HE 1355 chr3L 5499235 5499258 chr3L 5499340 5499363 7 105 2.0 0.0 1.0 3.5 128 chr3L 5499235 intergenic blanks -,CR44518 + chr3L 5499299 intergenic CR44518 +,blanks - chr3L 5499363 intergenic CR44518 +,blanks - chr3L_7_5495001 chr3L_5495001 RC1_1-HE 1356 chr3L 5530060 5530089 chr3L 5530143 5530172 8 83 2.0 4.5 3.2 1.9 112 chr3L 5530060 intergenic not near genes chr3L 5530116 intergenic not near genes chr3L 5530172 intergenic not near genes chr3L_8_5530001 chr3L_5530001 RC1_1-HE 1357 chr3L 5537723 5537747 chr3L 5538066 5538084 jockey 9 342 2.5 2.5 2.5 2.6 361 chr3L 5537723 intergenic not near genes chr3L 5537904 intergenic not near genes chr3L 5538084 intergenic CG10625 - chr3L_9_5535001 chr3L_5535001 RC1_1-HE 1358 chr3L 5582003 5582019 chr3L 5582081 5582097 10 78 2.5 0.0 1.2 4.5 94 chr3L 5582003 intergenic not near genes chr3L 5582050 intergenic not near genes chr3L 5582097 intergenic not near genes chr3L_10_5580001 chr3L_5580001 RC1_1-HE 1359 chr3L 5612683 5612717 chr3L 5612772 5612805 14 89 2.0 4.5 3.2 3.3 122 chr3L 5612683 intergenic not near genes chr3L 5612744 intergenic not near genes chr3L 5612805 intergenic not near genes chr3L_14_5610001 chr3L_5610001 RC1_1-HE 1360 chr3L 5836380 5836411 chr3L 5836462 5836462 12 79 0.5 4.5 2.5 3.4 82 chr3L 5836380 intron vn - chr3L 5836421 intron vn - chr3L 5836462 intron vn - chr3L_12_5835001 chr3L_5835001 RC1_1-HE 1361 chr3L 5846549 5846552 chr3L 5846643 5846646 4 94 14.0 4.0 9.0 0.4 97 chr3L 5846549 intergenic not near genes chr3L 5846598 intergenic not near genes chr3L 5846646 intergenic not near genes chr3L_4_5845001 chr3L_5845001 RC1_1-HE 1362 chr3L 5846554 5846576 chr3L 5846641 5846670 15 93 6.5 4.0 5.2 2.4 116 chr3L 5846554 intergenic not near genes chr3L 5846612 intergenic not near genes chr3L 5846670 intergenic not near genes chr3L_15_5845001 chr3L_5845001 RC1_1-HE 1363 chr3L 5864231 5864236 chr3L 5864309 5864314 4 78 8.5 17.5 13.0 0.3 83 chr3L 5864231 intergenic not near genes chr3L 5864272 intergenic not near genes chr3L 5864314 intergenic not near genes chr3L_4_5860001 chr3L_5860001 RC1_1-HE 1364 chr3L 5864241 5864251 chr3L 5864308 5864329 5 75 5.0 16.5 10.8 0.4 88 chr3L 5864241 intergenic not near genes chr3L 5864285 intergenic not near genes chr3L 5864329 intergenic not near genes chr3L_5_5860001 chr3L_5860001 RC1_1-HE 1365 chr3L 5910030 5910062 chr3L 5910272 5910304 pogo 10 242 2.5 4.5 3.5 2.2 274 chr3L 5910030 intron CG13288 + chr3L 5910167 intron CG13288 + chr3L 5910304 intron CG13288 + chr3L_10_5910001 chr3L_5910001 RC1_1-HE 1366 chr3L 5926315 5926348 chr3L 5926506 5926539 BS 12 189 4.5 4.0 4.2 2.3 224 chr3L 5926315 intron Vap-33B + chr3L 5926427 intron Vap-33B + chr3L 5926539 intron Vap-33B + chr3L_12_5925001 chr3L_5925001 RC1_1-HE 1367 chr3L 5949418 5949446 chr3L 5949510 5949538 13 92 0.0 7.0 3.5 2.9 120 chr3L 5949418 intron CG33993 - chr3L 5949478 intron CG33993 - chr3L 5949538 intron CG33993 - chr3L_13_5945001 chr3L_5945001 RC1_1-HE 1368 chr3L 5952041 5952070 chr3L 5952143 5952172 8 100 2.5 1.5 2.0 2.7 131 chr3L 5952041 intergenic not near genes chr3L 5952106 intergenic not near genes chr3L 5952172 intergenic not near genes chr3L_8_5950001 chr3L_5950001 RC1_1-HE 1369 chr3L 5977243 5977277 chr3L 5977322 5977356 22 78 6.5 0.5 3.5 4.9 113 chr3L 5977243 intergenic not near genes chr3L 5977300 intergenic not near genes chr3L 5977356 intergenic not near genes chr3L_22_5975001 chr3L_5975001 RC1_1-HE 1370 chr3L 6001679 6001717 chr3L 6004380 6004418 jockey 10 2700 8.5 2.0 5.2 1.6 2739 chr3L 6001679 intron PVRAP + chr3L 6003048 intron PVRAP + chr3L 6004418 intron PVRAP + chr3L_10_6000001 chr3L_6000001 RC1_1-HE 1371 chr3L 6011834 6011860 chr3L 6011926 6011952 18 91 3.5 4.5 4.0 3.6 118 chr3L 6011834 intron PVRAP + chr3L 6011893 intron PVRAP + chr3L 6011952 intron PVRAP + chr3L_18_6010001 chr3L_6010001 RC1_1-HE 1372 chr3L 6032737 6032770 chr3L 6032832 6032856 8 90 2.5 4.5 3.5 1.8 119 chr3L 6032737 intergenic CG10477 - chr3L 6032796 intergenic CG10477 - chr3L 6032856 intergenic CG10477 - chr3L_8_6030001 chr3L_6030001 RC1_1-HE 1373 chr3L 6040369 6040393 chr3L 6042726 6042750 Doc 13 2357 2.0 7.5 4.8 2.2 2381 chr3L 6040369 intergenic Jon65Aiv + chr3L 6041560 intergenic not near genes chr3L 6042750 intergenic not near genes chr3L_13_6040001 chr3L_6040001 RC1_1-HE 1374 chr3L 6052651 6052663 chr3L 6052737 6052749 11 86 8.5 10.5 9.5 1.0 98 chr3L 6052651 exon Jon65Aii + chr3L 6052700 intron Jon65Aii + chr3L 6052749 exon Jon65Aii + chr3L_11_6050001 chr3L_6050001 RC1_1-HE 1375 chr3L 6063325 6063357 chr3L 6063423 6063455 19 97 4.0 3.5 3.8 4.0 130 chr3L 6063325 intergenic CG10472 - chr3L 6063390 intergenic CG10472 - chr3L 6063455 intergenic not near genes chr3L_19_6060001 chr3L_6060001 RC1_1-HE 1376 chr3L 6077779 6077787 chr3L 6077860 6077868 4 81 8.0 0.0 4.0 0.8 89 chr3L 6077779 intron ssp6 + chr3L 6077824 intron ssp6 + chr3L 6077868 intron ssp6 + chr3L_4_6075001 chr3L_6075001 RC1_1-HE 1377 chr3L 6107218 6107251 chr3L 6107299 6107332 9 81 1.5 3.0 2.2 2.8 114 chr3L 6107218 intron Ets65A + chr3L 6107275 intron Ets65A + chr3L 6107332 intron Ets65A + chr3L_9_6105001 chr3L_6105001 RC1_1-HE 1378 chr3L 6116694 6116723 chr3L 6116779 6116808 10 84 6.5 5.0 5.8 1.5 114 chr3L 6116694 intron Ets65A + chr3L 6116751 intron Ets65A + chr3L 6116808 intron Ets65A + chr3L_10_6115001 chr3L_6115001 RC1_1-HE 1379 chr3L 6220916 6220941 chr3L 6230069 6230094 roo 9 9153 2.5 5.0 3.8 1.9 9178 chr3L 6220916 5` UTR pncr008:3L + chr3L 6225505 intergenic not near genes chr3L 6230094 intergenic not near genes chr3L_9_6225001 chr3L_6225001 RC1_1-HE 1380 chr3L 6261544 6261570 chr3L 6261636 6261662 9 92 4.5 4.0 4.2 1.7 118 chr3L 6261544 intron ImpL3 - chr3L 6261603 intron ImpL3 - chr3L 6261662 intron ImpL3 - chr3L_9_6260001 chr3L_6260001 RC1_1-HE 1381 chr3L 6335012 6335021 chr3L 6335484 6335493 297 5 472 7.5 7.5 7.5 0.6 481 chr3L 6335012 intron CG13300 - chr3L 6335252 intron CG13300 - chr3L 6335493 intron CG13300 - chr3L_5_6335001 chr3L_6335001 RC1_1-HE 1382 chr3L 6335022 6335040 chr3L 6335481 6335512 297 13 471 2.5 7.0 4.8 2.2 490 chr3L 6335022 intron CG13300 - chr3L 6335267 intron CG13300 - chr3L 6335512 intron CG13300 - chr3L_13_6335001 chr3L_6335001 RC1_1-HE 1383 chr3L 6367242 6367265 chr3L 6367333 6367356 9 91 4.5 3.0 3.8 1.9 114 chr3L 6367242 intergenic not near genes chr3L 6367299 intergenic not near genes chr3L 6367356 intergenic not near genes chr3L_9_6365001 chr3L_6365001 RC1_1-HE 1384 chr3L 6405658 6405688 chr3L 6432123 6432153 roo 8 26465 4.0 4.0 4.0 1.6 26495 chr3L 6405658 intron CG42747 + chr3L 6418906 intron CG42747 + chr3L 6432153 intron CG42747 + chr3L_8_6415001 chr3L_6415001 RC1_1-HE 1385 chr3L 6443668 6443686 chr3L 6443748 6443766 11 80 8.0 7.5 7.8 1.2 98 chr3L 6443668 intron CG42747 + chr3L 6443717 intron CG42747 + chr3L 6443766 intron CG42747 + chr3L_11_6440001 chr3L_6440001 RC1_1-HE 1386 chr3L 6445946 6445965 chr3L 6446023 6446042 13 77 7.5 5.0 6.2 1.8 96 chr3L 6445946 intron CG42747 + chr3L 6445994 intron CG42747 + chr3L 6446042 intron CG42747 + chr3L_13_6445001 chr3L_6445001 RC1_1-HE 1387 chr3L 6570077 6570113 chr3L 6570156 6570192 18 79 6.0 7.0 6.5 2.4 115 chr3L 6570077 intron,intron CG18769 +,jv - chr3L 6570134 intron,intron CG18769 +,jv - chr3L 6570192 intron,intron CG18769 +,jv - chr3L_18_6570001 chr3L_6570001 RC1_1-HE 1388 chr3L 6615018 6615047 chr3L 6615104 6615133 10 86 6.5 3.0 4.8 1.7 115 chr3L 6615018 intron CG8398 + chr3L 6615076 intron CG8398 + chr3L 6615133 intron CG8398 + chr3L_10_6615001 chr3L_6615001 RC1_1-HE 1389 chr3L 6651295 6651326 chr3L 6651383 6651414 16 88 4.0 5.0 4.5 2.9 119 chr3L 6651295 intergenic not near genes chr3L 6651354 intergenic not near genes chr3L 6651414 intergenic not near genes chr3L_16_6650001 chr3L_6650001 RC1_1-HE 1390 chr3L 6781124 6781150 chr3L 6783138 6783164 Doc 20 2013 4.0 1.5 2.8 5.3 2040 chr3L 6781124 intergenic not near genes chr3L 6782144 intergenic not near genes chr3L 6783164 intergenic not near genes chr3L_20_6780001 chr3L_6780001 RC1_1-HE 1391 chr3L 6853788 6853821 chr3L 6853908 6853941 8 120 0.5 4.5 2.5 2.3 153 chr3L 6853788 intergenic not near genes chr3L 6853864 intergenic not near genes chr3L 6853941 intergenic not near genes chr3L_8_6850001 chr3L_6850001 RC1_1-HE 1392 chr3L 6855933 6855954 chr3L 6860720 6860741 Doc 10 4787 5.0 5.5 5.2 1.6 4808 chr3L 6855933 intergenic not near genes chr3L 6858337 intergenic not near genes chr3L 6860741 intergenic not near genes chr3L_10_6855001 chr3L_6855001 RC1_1-HE 1393 chr3L 6887518 6887536 chr3L 6895011 6895029 roo 7 7493 2.5 0.0 1.2 3.2 7511 chr3L 6887518 intergenic not near genes chr3L 6891274 intergenic not near genes chr3L 6895029 intergenic not near genes chr3L_7_6890001 chr3L_6890001 RC1_1-HE 1394 chr3L 6908013 6908019 chr3L 6908099 6908105 4 86 8.0 0.0 4.0 0.8 92 chr3L 6908013 intergenic not near genes chr3L 6908059 intergenic not near genes chr3L 6908105 intergenic not near genes chr3L_4_6905001 chr3L_6905001 RC1_1-HE 1395 chr3L 6930286 6930310 chr3L 6930436 6930460 5 150 3.0 1.0 2.0 1.7 174 chr3L 6930286 intergenic not near genes chr3L 6930373 intergenic not near genes chr3L 6930460 intergenic not near genes chr3L_5_6930001 chr3L_6930001 RC1_1-HE 1396 chr3L 6930962 6930988 chr3L 6931042 6931068 9 80 2.5 2.5 2.5 2.6 106 chr3L 6930962 intergenic CG45413 - chr3L 6931015 intergenic CG45413 - chr3L 6931068 3` UTR CG45413 - chr3L_9_6930001 chr3L_6930001 RC1_1-HE 1397 chr3L 7021100 7021129 chr3L 7021199 7021228 16 98 2.5 8.0 5.2 2.6 128 chr3L 7021100 intron Mp + chr3L 7021164 intron Mp + chr3L 7021228 intron Mp + chr3L_16_7020001 chr3L_7020001 RC1_1-HE 1398 chr3L 7041922 7041925 chr3L 7042000 7042003 4 78 5.0 3.5 4.2 0.8 81 chr3L 7041922 intron Mp + chr3L 7041962 intron Mp + chr3L 7042003 intron Mp + chr3L_4_7040001 chr3L_7040001 RC1_1-HE 1399 chr3L 7079603 7079638 chr3L 7079681 7079716 19 78 6.0 3.5 4.8 3.3 113 chr3L 7079603 intergenic not near genes chr3L 7079660 intergenic not near genes chr3L 7079716 intergenic not near genes chr3L_19_7075001 chr3L_7075001 RC1_1-HE 1400 chr3L 7104066 7104080 chr3L 7104154 7104168 6 88 6.5 0.0 3.2 1.4 102 chr3L 7104066 intron form3 + chr3L 7104117 intron form3 + chr3L 7104168 intron form3 + chr3L_6_7100001 chr3L_7100001 RC1_1-HE 1401 chr3L 7129959 7129983 chr3L 7130152 7130176 BS 5 193 3.0 2.5 2.8 1.3 217 chr3L 7129959 intergenic CG15829 + chr3L 7130068 intergenic CG15829 + chr3L 7130176 intergenic not near genes chr3L_5_7130001 chr3L_7130001 RC1_1-HE 1402 chr3L 7187398 7187422 chr3L 7187481 7187505 15 83 0.0 0.0 0.0 15.0 107 chr3L 7187398 intron Dscam2 - chr3L 7187452 intron Dscam2 - chr3L 7187505 intron Dscam2 - chr3L_15_7185001 chr3L_7185001 RC1_1-HE 1403 chr3L 7193592 7193610 chr3L 7193675 7193693 5 83 4.0 5.5 4.8 0.9 101 chr3L 7193592 intergenic not near genes chr3L 7193642 intergenic not near genes chr3L 7193693 intergenic not near genes chr3L_5_7190001 chr3L_7190001 RC1_1-HE 1404 chr3L 7209013 7209040 chr3L 7209090 7209117 12 77 4.0 4.0 4.0 2.4 104 chr3L 7209013 intergenic not near genes chr3L 7209065 intergenic not near genes chr3L 7209117 intergenic not near genes chr3L_12_7205001 chr3L_7205001 RC1_1-HE 1405 chr3L 7219765 7219787 chr3L 7219855 7219877 10 90 4.0 3.5 3.8 2.1 112 chr3L 7219765 intergenic not near genes chr3L 7219821 intergenic not near genes chr3L 7219877 intergenic not near genes chr3L_10_7215001 chr3L_7215001 RC1_1-HE 1406 chr3L 7274728 7274740 chr3L 7274833 7274845 9 105 4.0 3.5 3.8 1.9 117 chr3L 7274728 intron unc-13-4A - chr3L 7274786 intron unc-13-4A - chr3L 7274845 intron unc-13-4A - chr3L_9_7270001 chr3L_7270001 RC1_1-HE 1407 chr3L 7276160 7276173 chr3L 7276238 7276251 10 78 4.5 7.5 6.0 1.4 91 chr3L 7276160 intron unc-13-4A - chr3L 7276206 intron unc-13-4A - chr3L 7276251 intron unc-13-4A - chr3L_10_7275001 chr3L_7275001 RC1_1-HE 1408 chr3L 7285454 7285477 chr3L 7285533 7285556 12 79 3.0 3.0 3.0 3.0 102 chr3L 7285454 intron unc-13-4A - chr3L 7285505 intron unc-13-4A - chr3L 7285556 intron unc-13-4A - chr3L_12_7285001 chr3L_7285001 RC1_1-HE 1409 chr3L 7307976 7307988 chr3L 7308056 7308068 5 80 4.0 3.5 3.8 1.0 92 chr3L 7307976 intron unc-13-4A - chr3L 7308022 intron unc-13-4A - chr3L 7308068 intron unc-13-4A - chr3L_5_7305001 chr3L_7305001 RC1_1-HE 1410 chr3L 7377315 7377348 chr3L 7380421 7380454 297 9 3106 3.0 1.0 2.0 3.0 3139 chr3L 7377315 intron SMSr - chr3L 7378884 intron SMSr - chr3L 7380454 intron SMSr - chr3L_9_7375001 chr3L_7375001 RC1_1-HE 1411 chr3L 7498756 7498785 chr3L 7503534 7503563 F-element 11 4778 5.5 5.5 5.5 1.7 4807 chr3L 7498756 5` UTR CG8539 - chr3L 7501160 intergenic not near genes chr3L 7503563 intergenic not near genes chr3L_11_7500001 chr3L_7500001 RC1_1-HE 1412 chr3L 7505414 7505440 chr3L 7505491 7505512 4 76 0.0 3.5 1.8 1.4 98 chr3L 7505414 intergenic CG7548 - chr3L 7505463 intergenic CG7548 - chr3L 7505512 intergenic CG7548 - chr3L_4_7505001 chr3L_7505001 RC1_1-HE 1413 chr3L 7524151 7524168 chr3L 7524249 7524265 5 98 2.0 0.5 1.2 2.3 114 chr3L 7524151 intron ltl + chr3L 7524208 intron ltl + chr3L 7524265 intron ltl + chr3L_5_7520001 chr3L_7520001 RC1_1-HE 1414 chr3L 7556900 7556929 chr3L 7556987 7557016 7 87 1.0 1.0 1.0 3.5 116 chr3L 7556900 exon CG14837 - chr3L 7556958 exon CG14837 - chr3L 7557016 exon CG14837 - chr3L_7_7555001 chr3L_7555001 RC1_1-HE 1415 chr3L 7576210 7576230 chr3L 7576299 7576319 14 89 4.5 4.0 4.2 2.7 109 chr3L 7576210 intergenic not near genes chr3L 7576264 intergenic not near genes chr3L 7576319 intergenic not near genes chr3L_14_7575001 chr3L_7575001 RC1_1-HE 1416 chr3L 7607800 7607813 chr3L 7607950 7607963 7 150 4.5 3.5 4.0 1.4 163 chr3L 7607800 intron CG33275 + chr3L 7607882 intron CG33275 + chr3L 7607963 intron CG33275 + chr3L_7_7605001 chr3L_7605001 RC1_1-HE 1417 chr3L 7731833 7731857 chr3L 7732010 7732034 6 177 38.0 27.0 32.5 0.2 201 chr3L 7731833 intron,exon CG32373 +,CG8492 - chr3L 7731934 intron,exon CG32373 +,CG8492 - chr3L 7732034 intron,5` UTR CG32373 +,CG8492 - chr3L_6_7730001 chr3L_7730001 RC1_1-HE 1418 chr3L 7791415 7791429 chr3L 7791492 7791506 4 77 0.5 3.0 1.8 1.4 91 chr3L 7791415 intron CG32369 - chr3L 7791460 intron CG32369 - chr3L 7791506 intron CG32369 - chr3L_4_7790001 chr3L_7790001 RC1_1-HE 1419 chr3L 7793712 7793745 chr3L 7800765 7800798 297 17 7053 4.5 5.5 5.0 2.8 7086 chr3L 7793712 intron CG32369 - chr3L 7797255 intron CG32369 - chr3L 7800798 intron CG32369 - chr3L_17_7795001 chr3L_7795001 RC1_1-HE 1420 chr3L 7845385 7845407 chr3L 7845469 7845491 6 84 4.0 0.0 2.0 2.0 106 chr3L 7845385 intron Pdp1 - chr3L 7845438 intron Pdp1 - chr3L 7845491 intron Pdp1 - chr3L_6_7845001 chr3L_7845001 RC1_1-HE 1421 chr3L 7868319 7868355 chr3L 7868426 7868462 16 107 7.0 7.0 7.0 2.0 143 chr3L 7868319 intergenic not near genes chr3L 7868390 intergenic not near genes chr3L 7868462 intergenic not near genes chr3L_16_7865001 chr3L_7865001 RC1_1-HE 1422 chr3L 7869663 7869674 chr3L 7869744 7869755 7 81 10.5 1.0 5.8 1.0 92 chr3L 7869663 exon CG32365 + chr3L 7869709 exon CG32365 + chr3L 7869755 exon CG32365 + chr3L_7_7865001 chr3L_7865001 RC1_1-HE 1423 chr3L 7884447 7884468 chr3L 7884527 7884549 7 80 0.0 9.5 4.8 1.2 102 chr3L 7884447 intron CG32365 + chr3L 7884498 intron CG32365 + chr3L 7884549 intron CG32365 + chr3L_7_7880001 chr3L_7880001 RC1_1-HE 1424 chr3L 7886523 7886547 chr3L 7889033 7889066 Stalker4 11 2518 3.0 2.5 2.8 2.9 2543 chr3L 7886523 intron CG32365 + chr3L 7887794 intron CG32365 + chr3L 7889066 intron CG32365 + chr3L_11_7885001 chr3L_7885001 RC1_1-HE 1425 chr3L 7916007 7916118 chr3L 7916118 7916278 9 149 0.0 0.0 0.0 9.0 271 chr3L 7916007 intergenic CG32368 + chr3L 7916142 intergenic CG32368 + chr3L 7916278 intergenic syd -,CG32368 + chr3L_9_7915001 chr3L_7915001 RC1_1-HE 1426 chr3L 7916829 7916861 chr3L 7926001 7926033 roo 14 9170 3.5 2.0 2.8 3.7 9204 chr3L 7916829 3` UTR syd - chr3L 7921431 intron syd - chr3L 7926033 3` UTR syd - chr3L_14_7920001 chr3L_7920001 RC1_1-HE 1427 chr3L 7995958 7995972 chr3L 7996067 7996081 8 109 8.5 0.0 4.2 1.5 123 chr3L 7995958 intron nmo + chr3L 7996020 intron nmo + chr3L 7996081 intron nmo + chr3L_8_7995001 chr3L_7995001 RC1_1-HE 1428 chr3L 7997606 7997622 chr3L 7997687 7997703 4 81 6.0 2.5 4.2 0.8 97 chr3L 7997606 intron nmo + chr3L 7997654 intron nmo + chr3L 7997703 intron nmo + chr3L_4_7995001 chr3L_7995001 RC1_1-HE 1429 chr3L 8019704 8019733 chr3L 8024119 8024147 NOF 5 4414 2.0 4.0 3.0 1.2 4443 chr3L 8019704 intron nmo + chr3L 8021926 intron nmo + chr3L 8024147 intron nmo + chr3L_5_8020001 chr3L_8020001 RC1_1-HE 1430 chr3L 8034248 8034261 chr3L 8034325 8034338 5 77 0.5 3.5 2.0 1.7 90 chr3L 8034248 intron nmo + chr3L 8034293 intron nmo + chr3L 8034338 intron nmo + chr3L_5_8030001 chr3L_8030001 RC1_1-HE 1431 chr3L 8062853 8062860 chr3L 8062933 8062940 5 80 5.0 4.5 4.8 0.9 87 chr3L 8062853 intergenic not near genes chr3L 8062896 intergenic not near genes chr3L 8062940 intergenic not near genes chr3L_5_8060001 chr3L_8060001 RC1_1-HE 1432 chr3L 8081284 8081301 chr3L 8081388 8081405 6 104 1.5 9.0 5.2 1.0 121 chr3L 8081284 intron Ect4 + chr3L 8081344 intron Ect4 + chr3L 8081405 intron Ect4 + chr3L_6_8080001 chr3L_8080001 RC1_1-HE 1433 chr3L 8108677 8108710 chr3L 8108760 8108793 7 83 0.5 2.0 1.2 3.2 116 chr3L 8108677 exon Ect4 + chr3L 8108735 3` UTR Ect4 + chr3L 8108793 3` UTR Ect4 + chr3L_7_8105001 chr3L_8105001 RC1_1-HE 1434 chr3L 8225815 8225840 chr3L 8225895 8225920 6 80 8.0 1.0 4.5 1.1 105 chr3L 8225815 intergenic not near genes chr3L 8225868 intergenic not near genes chr3L 8225920 intergenic not near genes chr3L_6_8225001 chr3L_8225001 RC1_1-HE 1435 chr3L 8252453 8252477 chr3L 8252781 8252805 25 328 8.5 5.5 7.0 3.1 352 chr3L 8252453 intron Dscam4 + chr3L 8252629 intron Dscam4 + chr3L 8252805 intron Dscam4 + chr3L_25_8250001 chr3L_8250001 RC1_1-HE 1436 chr3L 8259245 8259278 chr3L 8259331 8259364 10 86 3.0 2.0 2.5 2.9 119 chr3L 8259245 intron Dscam4 + chr3L 8259304 intron Dscam4 + chr3L 8259364 intron Dscam4 + chr3L_10_8255001 chr3L_8255001 RC1_1-HE 1437 chr3L 8274838 8274842 chr3L 8274953 8274956 6 115 4.0 0.0 2.0 2.0 118 chr3L 8274838 intron Dscam4 + chr3L 8274897 intron Dscam4 + chr3L 8274956 intron Dscam4 + chr3L_6_8270001 chr3L_8270001 RC1_1-HE 1438 chr3L 8314756 8314770 chr3L 8314843 8314864 8 93 0.5 7.0 3.8 1.7 108 chr3L 8314756 intron CG7185 - chr3L 8314810 intron CG7185 - chr3L 8314864 intron CG7185 - chr3L_8_8310001 chr3L_8310001 RC1_1-HE 1439 chr3L 8413841 8413870 chr3L 8413921 8413950 4 80 2.0 3.0 2.5 1.1 109 chr3L 8413841 intron,3` UTR Exo70 +,mtrm + chr3L 8413896 intron,3` UTR Exo70 +,mtrm + chr3L 8413950 intron,3` UTR Exo70 +,mtrm + chr3L_4_8410001 chr3L_8410001 RC1_1-HE 1440 chr3L 8456472 8456489 chr3L 8456568 8456584 11 96 8.5 18.0 13.2 0.8 112 chr3L 8456472 intron Gug + chr3L 8456528 intron Gug + chr3L 8456584 intron Gug + chr3L_11_8455001 chr3L_8455001 RC1_1-HE 1441 chr3L 8460004 8460039 chr3L 8460085 8460120 34 80 7.0 5.0 6.0 4.9 116 chr3L 8460004 intron Gug + chr3L 8460062 intron Gug + chr3L 8460120 intron Gug + chr3L_34_8460001 chr3L_8460001 RC1_1-HE 1442 chr3L 8481774 8481804 chr3L 8490934 8490934 roo 7 9151 0.5 2.5 1.5 2.8 9160 chr3L 8481774 intron CG43163 - chr3L 8486354 intron CG43163 - chr3L 8490934 intron CG43163 - chr3L_7_8485001 chr3L_8485001 RC1_1-HE 1443 chr3L 8498295 8498330 chr3L 8505763 8505798 blood 10 7468 0.0 3.0 1.5 4.0 7503 chr3L 8498295 intron CG43163 - chr3L 8502046 intron CG43163 - chr3L 8505798 intron CG43163 - chr3L_10_8500001 chr3L_8500001 RC1_1-HE 1444 chr3L 8618068 8618085 chr3L 8620712 8620729 5 2644 22.5 8.5 15.5 0.3 2661 chr3L 8618068 exon S-Lap1 + chr3L 8619398 3` UTR S-Lap1 + chr3L 8620729 exon S-Lap2 + chr3L_5_8615001 chr3L_8615001 RC1_1-HE 1445 chr3L 8740693 8740710 chr3L 8740777 8740794 10 84 10.5 2.5 6.5 1.3 101 chr3L 8740693 intron Prm - chr3L 8740744 intron Prm - chr3L 8740794 intron Prm - chr3L_10_8740001 chr3L_8740001 RC1_1-HE 1446 chr3L 8765988 8766026 chr3L 8766073 8766111 13 85 6.5 3.5 5.0 2.2 123 chr3L 8765988 intron Fhos + chr3L 8766050 intron Fhos + chr3L 8766111 intron Fhos + chr3L_13_8765001 chr3L_8765001 RC1_1-HE 1447 chr3L 8784857 8784864 chr3L 8784941 8784948 4 84 3.5 5.0 4.2 0.8 91 chr3L 8784857 intron Fhos + chr3L 8784902 intron Fhos + chr3L 8784948 intron Fhos + chr3L_4_8780001 chr3L_8780001 RC1_1-HE 1448 chr3L 8791279 8791299 chr3L 8796700 8796706 I-element 6 5418 4.0 0.0 2.0 2.0 5427 chr3L 8791279 exon Fhos + chr3L 8793992 intron Fhos + chr3L 8796706 intron Fhos + chr3L_6_8790001 chr3L_8790001 RC1_1-HE 1449 chr3L 8816966 8816994 chr3L 8817044 8817072 12 78 1.5 4.5 3.0 3.0 106 chr3L 8816966 intergenic not near genes chr3L 8817019 intergenic not near genes chr3L 8817072 intergenic not near genes chr3L_12_8815001 chr3L_8815001 RC1_1-HE 1450 chr3L 8861522 8861545 chr3L 8861614 8861637 7 92 2.5 1.0 1.8 2.5 115 chr3L 8861522 intron dally + chr3L 8861580 intron dally + chr3L 8861637 intron dally + chr3L_7_8860001 chr3L_8860001 RC1_1-HE 1451 chr3L 8887319 8887356 chr3L 8887405 8887442 10 86 1.0 1.0 1.0 5.0 123 chr3L 8887319 intron dally + chr3L 8887380 intron dally + chr3L 8887442 intron dally + chr3L_10_8885001 chr3L_8885001 RC1_1-HE 1452 chr3L 9023862 9023890 chr3L 9023939 9023945 15 72 0.5 6.5 3.5 3.3 83 chr3L 9023862 intergenic not near genes chr3L 9023904 intergenic not near genes chr3L 9023945 intergenic not near genes chr3L_15_9020001 chr3L_9020001 RC1_1-HE 1453 chr3L 9042541 9042566 chr3L 9042618 9042645 8 79 5.5 3.5 4.5 1.5 104 chr3L 9042541 intron Doc1 + chr3L 9042593 intron Doc1 + chr3L 9042645 intron Doc1 + chr3L_8_9040001 chr3L_9040001 RC1_1-HE 1454 chr3L 9061128 9061162 chr3L 9061237 9061271 16 107 5.0 3.0 4.0 3.2 143 chr3L 9061128 intron Argk - chr3L 9061200 intron Argk - chr3L 9061271 intron Argk - chr3L_16_9060001 chr3L_9060001 RC1_1-HE 1455 chr3L 9076940 9076959 chr3L 9084501 9084509 412 9 7560 7.0 11.5 9.2 0.9 7569 chr3L 9076940 exon Tequila + chr3L 9080724 intron Tequila + chr3L 9084509 exon Tequila + chr3L_9_9080001 chr3L_9080001 RC1_1-HE 1456 chr3L 9122812 9122825 chr3L 9122884 9122906 6 78 5.5 9.0 7.2 0.7 94 chr3L 9122812 intron bol - chr3L 9122859 intron bol - chr3L 9122906 intron bol - chr3L_6_9120001 chr3L_9120001 RC1_1-HE 1457 chr3L 9123412 9123432 chr3L 9123481 9123519 9 75 4.0 5.0 4.5 1.6 107 chr3L 9123412 intron bol - chr3L 9123466 intron bol - chr3L 9123519 intron bol - chr3L_9_9120001 chr3L_9120001 RC1_1-HE 1458 chr3L 9164694 9164730 chr3L 9166162 9166198 hobo 17 1468 4.0 1.0 2.5 4.9 1504 chr3L 9164694 intron Rdl - chr3L 9165446 intron Rdl - chr3L 9166198 intron Rdl - chr3L_17_9165001 chr3L_9165001 RC1_1-HE 1459 chr3L 9180744 9180780 chr3L 9180917 9180935 24 171 8.5 12.0 10.2 2.1 191 chr3L 9180744 intron Rdl - chr3L 9180840 intron Rdl - chr3L 9180935 intron Rdl - chr3L_24_9180001 chr3L_9180001 RC1_1-HE 1460 chr3L 9217780 9217813 chr3L 9217861 9217894 18 81 8.0 3.5 5.8 2.6 114 chr3L 9217780 intergenic not near genes chr3L 9217837 intergenic not near genes chr3L 9217894 intergenic not near genes chr3L_18_9215001 chr3L_9215001 RC1_1-HE 1461 chr3L 9219242 9219276 chr3L 9219915 9219936 jockey 14 668 8.0 9.0 8.5 1.5 694 chr3L 9219242 intergenic not near genes chr3L 9219589 intergenic not near genes chr3L 9219936 intergenic not near genes chr3L_14_9215001 chr3L_9215001 RC1_1-HE 1462 chr3L 9237547 9237556 chr3L 9237628 9237637 4 81 0.5 5.5 3.0 1.0 90 chr3L 9237547 intergenic not near genes chr3L 9237592 intergenic not near genes chr3L 9237637 intergenic not near genes chr3L_4_9235001 chr3L_9235001 RC1_1-HE 1463 chr3L 9270615 9270651 chr3L 9278371 9278407 roo 5 7756 2.5 5.0 3.8 1.0 7792 chr3L 9270615 intron GluRIB + chr3L 9274511 intron GluRIB + chr3L 9278407 exon GluRIB + chr3L_5_9270001 chr3L_9270001 RC1_1-HE 1464 chr3L 9290042 9290072 chr3L 9290119 9290149 5 77 0.5 0.0 0.2 4.2 107 chr3L 9290042 intergenic not near genes chr3L 9290096 intergenic not near genes chr3L 9290149 intergenic not near genes chr3L_5_9290001 chr3L_9290001 RC1_1-HE 1465 chr3L 9348468 9348482 chr3L 9348971 9348983 9 502 5.0 0.0 2.5 2.6 515 chr3L 9348468 intergenic PGRP-LC + chr3L 9348726 intergenic PGRP-LC + chr3L 9348983 intergenic not near genes chr3L_9_9345001 chr3L_9345001 RC1_1-HE 1466 chr3L 9421233 9421248 chr3L 9421312 9421327 6 79 0.0 5.0 2.5 1.7 94 chr3L 9421233 intron CG3967 - chr3L 9421280 intron CG3967 - chr3L 9421327 intron CG3967 - chr3L_6_9420001 chr3L_9420001 RC1_1-HE 1467 chr3L 9443514 9443540 chr3L 9445302 9445328 S-element 10 1788 5.0 2.5 3.8 2.1 1814 chr3L 9443514 intron CG33926 + chr3L 9444421 intron CG33926 + chr3L 9445328 intron CG33926 + chr3L_10_9440001 chr3L_9440001 RC1_1-HE 1468 chr3L 9533750 9533783 chr3L 9541311 9541342 412 14 7558 7.5 8.5 8.0 1.6 7592 chr3L 9533750 intergenic not near genes chr3L 9537546 intergenic not near genes chr3L 9541342 intergenic not near genes chr3L_14_9535001 chr3L_9535001 RC1_1-HE 1469 chr3L 9541851 9541864 chr3L 9541940 9541953 9 89 6.0 5.0 5.5 1.4 102 chr3L 9541851 intergenic Ir67a - chr3L 9541902 intergenic Ir67a - chr3L 9541953 intergenic Ir67a - chr3L_9_9540001 chr3L_9540001 RC1_1-HE 1470 chr3L 9571899 9571925 chr3L 9572248 9572274 jockey 12 349 6.0 0.0 3.0 3.0 375 chr3L 9571899 intron CG42673 + chr3L 9572086 intron CG42673 + chr3L 9572274 intron CG42673 + chr3L_12_9570001 chr3L_9570001 RC1_1-HE 1471 chr3L 9575905 9575936 chr3L 9580984 9581015 jockey 14 5079 11.0 1.0 6.0 2.0 5110 chr3L 9575905 intron CG42673 + chr3L 9578460 intron CG42673 + chr3L 9581015 intron CG42673 + chr3L_14_9575001 chr3L_9575001 RC1_1-HE 1472 chr3L 9637851 9637878 chr3L 9637934 9637961 13 83 5.0 6.5 5.8 1.9 110 chr3L 9637851 intron fry - chr3L 9637906 intron fry - chr3L 9637961 intron fry - chr3L_13_9635001 chr3L_9635001 RC1_1-HE 1473 chr3L 9649626 9649660 chr3L 9649717 9649753 10 92 4.5 4.0 4.2 1.9 127 chr3L 9649626 intron,intron fry -,CG33696 + chr3L 9649690 intron,intron fry -,CG33696 + chr3L 9649753 intron,intron fry -,CG33696 + chr3L_10_9645001 chr3L_9645001 RC1_1-HE 1474 chr3L 9715596 9715625 chr3L 9715673 9715703 5 77 3.5 6.5 5.0 0.8 107 chr3L 9715596 intron vsg + chr3L 9715650 intron vsg + chr3L 9715703 intron vsg + chr3L_5_9715001 chr3L_9715001 RC1_1-HE 1475 chr3L 9738610 9738643 chr3L 9738814 9738847 9 204 3.5 1.5 2.5 2.6 237 chr3L 9738610 intron CG42268 - chr3L 9738728 intron CG42268 - chr3L 9738847 intron CG42268 - chr3L_9_9735001 chr3L_9735001 RC1_1-HE 1476 chr3L 9788177 9788201 chr3L 9788278 9788302 9 100 1.5 4.5 3.0 2.2 125 chr3L 9788177 3` UTR Zasp67 - chr3L 9788240 3` UTR Zasp67 - chr3L 9788302 3` UTR Zasp67 - chr3L_9_9785001 chr3L_9785001 RC1_1-HE 1477 chr3L 9806105 9806137 chr3L 9806190 9806222 12 85 4.0 5.0 4.5 2.2 117 chr3L 9806105 intron CG32052 + chr3L 9806164 intron CG32052 + chr3L 9806222 intron CG32052 + chr3L_12_9805001 chr3L_9805001 RC1_1-HE 1478 chr3L 9920620 9920654 chr3L 9921166 9921184 7 544 3.5 3.5 3.5 1.6 564 chr3L 9920620 intron CG34356 + chr3L 9920902 intron CG34356 + chr3L 9921184 intron CG34356 + chr3L_7_9920001 chr3L_9920001 RC1_1-HE 1479 chr3L 9929675 9929699 chr3L 9938455 9938480 roo 7 8781 3.5 1.5 2.5 2.0 8805 chr3L 9929675 intron CG34356 + chr3L 9934078 intron CG34356 + chr3L 9938480 intron CG34356 + chr3L_7_9930001 chr3L_9930001 RC1_1-HE 1480 chr3L 9992709 9992731 chr3L 9992786 9992809 5 77 4.0 2.0 3.0 1.2 100 chr3L 9992709 intron dpr6 + chr3L 9992759 intron dpr6 + chr3L 9992809 intron dpr6 + chr3L_5_9990001 chr3L_9990001 RC1_1-HE 1481 chr3L 10007429 10007458 chr3L 10007511 10007540 17 82 4.0 8.0 6.0 2.4 111 chr3L 10007429 intron dpr6 + chr3L 10007484 intron dpr6 + chr3L 10007540 intron dpr6 + chr3L_17_10005001 chr3L_10005001 RC1_1-HE 1482 chr3L 10027335 10027367 chr3L 10027599 10027631 9 264 5.0 3.0 4.0 1.8 296 chr3L 10027335 intron dpr6 + chr3L 10027483 intron dpr6 + chr3L 10027631 intron dpr6 + chr3L_9_10025001 chr3L_10025001 RC1_1-HE 1483 chr3L 10047114 10047142 chr3L 10047202 10047230 17 88 6.0 5.0 5.5 2.6 116 chr3L 10047114 intron dpr6 + chr3L 10047172 intron dpr6 + chr3L 10047230 intron dpr6 + chr3L_17_10045001 chr3L_10045001 RC1_1-HE 1484 chr3L 10050549 10050557 chr3L 10050666 10050673 7 117 9.5 0.0 4.8 1.2 124 chr3L 10050549 intron dpr6 + chr3L 10050611 intron dpr6 + chr3L 10050673 intron dpr6 + chr3L_7_10050001 chr3L_10050001 RC1_1-HE 1485 chr3L 10145083 10145123 chr3L 10145363 10145403 15 279 1.5 6.0 3.8 3.1 320 chr3L 10145083 intergenic not near genes chr3L 10145243 intergenic not near genes chr3L 10145403 intergenic not near genes chr3L_15_10145001 chr3L_10145001 RC1_1-HE 1486 chr3L 10191283 10191316 chr3L 10191395 10191428 12 112 5.5 3.5 4.5 2.2 145 chr3L 10191283 intron ect - chr3L 10191356 intron ect - chr3L 10191428 intron ect - chr3L_12_10190001 chr3L_10190001 RC1_1-HE 1487 chr3L 10199594 10199628 chr3L 10199705 10199739 24 110 3.0 4.0 3.5 5.3 145 chr3L 10199594 intron ect - chr3L 10199666 intron ect - chr3L 10199739 intron ect - chr3L_24_10195001 chr3L_10195001 RC1_1-HE 1488 chr3L 10214818 10214827 chr3L 10214921 10214930 6 103 3.5 4.0 3.8 1.2 112 chr3L 10214818 intergenic not near genes chr3L 10214874 intergenic not near genes chr3L 10214930 intergenic not near genes chr3L_6_10210001 chr3L_10210001 RC1_1-HE 1489 chr3L 10227218 10227241 chr3L 10227300 10227324 6 82 3.0 0.0 1.5 2.4 106 chr3L 10227218 intergenic not near genes chr3L 10227271 intergenic not near genes chr3L 10227324 intergenic not near genes chr3L_6_10225001 chr3L_10225001 RC1_1-HE 1490 chr3L 10255375 10255400 chr3L 10255474 10255499 9 99 0.0 1.0 0.5 6.0 124 chr3L 10255375 intergenic not near genes chr3L 10255437 intergenic not near genes chr3L 10255499 intergenic not near genes chr3L_9_10255001 chr3L_10255001 RC1_1-HE 1491 chr3L 10301255 10301284 chr3L 10301332 10301363 11 79 1.0 3.0 2.0 3.7 108 chr3L 10301255 intergenic not near genes chr3L 10301309 intergenic not near genes chr3L 10301363 intergenic not near genes chr3L_11_10300001 chr3L_10300001 RC1_1-HE 1492 chr3L 10313360 10313372 chr3L 10313452 10313465 5 91 4.5 3.5 4.0 1.0 105 chr3L 10313360 intergenic not near genes chr3L 10313412 intergenic not near genes chr3L 10313465 intergenic not near genes chr3L_5_10310001 chr3L_10310001 RC1_1-HE 1493 chr3L 10313373 10313389 chr3L 10313451 10313482 6 89 3.5 3.5 3.5 1.3 109 chr3L 10313373 intergenic not near genes chr3L 10313428 intergenic not near genes chr3L 10313482 intergenic not near genes chr3L_6_10310001 chr3L_10310001 RC1_1-HE 1494 chr3L 10328116 10328129 chr3L 10328229 10328242 8 113 5.5 9.5 7.5 0.9 126 chr3L 10328116 intergenic not near genes chr3L 10328179 intergenic not near genes chr3L 10328242 intergenic not near genes chr3L_8_10325001 chr3L_10325001 RC1_1-HE 1495 chr3L 10336856 10336866 chr3L 10336933 10336943 6 77 9.0 3.0 6.0 0.9 87 chr3L 10336856 intergenic not near genes chr3L 10336900 intergenic not near genes chr3L 10336943 intergenic not near genes chr3L_6_10335001 chr3L_10335001 RC1_1-HE 1496 chr3L 10348550 10348582 chr3L 10348634 10348666 18 84 3.5 4.5 4.0 3.6 116 chr3L 10348550 intron CR44327 + chr3L 10348608 intron CR44327 + chr3L 10348666 intron CR44327 + chr3L_18_10345001 chr3L_10345001 RC1_1-HE 1497 chr3L 10414942 10414972 chr3L 10417315 10417345 Doc 14 2373 1.0 4.5 2.8 3.7 2403 chr3L 10414942 intergenic CG12362 + chr3L 10416144 intergenic not near genes chr3L 10417345 intergenic not near genes chr3L_14_10415001 chr3L_10415001 RC1_1-HE 1498 chr3L 10417577 10417591 chr3L 10417655 10417661 8 77 5.0 8.5 6.8 1.0 84 chr3L 10417577 intergenic not near genes chr3L 10417619 intergenic not near genes chr3L 10417661 intergenic not near genes chr3L_8_10415001 chr3L_10415001 RC1_1-HE 1499 chr3L 10417592 10417604 chr3L 10417647 10417682 8 75 4.5 5.0 4.8 1.4 90 chr3L 10417592 intergenic not near genes chr3L 10417637 intergenic not near genes chr3L 10417682 intergenic not near genes chr3L_8_10415001 chr3L_10415001 RC1_1-HE 1500 chr3L 10430075 10430102 chr3L 10430153 10430180 17 78 4.5 0.0 2.2 5.3 105 chr3L 10430075 3` UTR Ir67b - chr3L 10430128 3` UTR Ir67b - chr3L 10430180 3` UTR Ir67b - chr3L_17_10430001 chr3L_10430001 RC1_1-HE 1501 chr3L 10557279 10557298 chr3L 10557357 10557376 14 77 13.5 8.5 11.0 1.2 97 chr3L 10557279 intron,3` UTR A2bp1 +,CG6527 - chr3L 10557328 intron,3` UTR A2bp1 +,CG6527 - chr3L 10557376 intron,3` UTR A2bp1 +,CG6527 - chr3L_14_10555001 chr3L_10555001 RC1_1-HE 1502 chr3L 10583559 10583597 chr3L 10583641 10583679 14 81 3.0 3.5 3.2 3.3 120 chr3L 10583559 intron A2bp1 + chr3L 10583619 intron A2bp1 + chr3L 10583679 intron A2bp1 + chr3L_14_10580001 chr3L_10580001 RC1_1-HE 1503 chr3L 10584279 10584298 chr3L 10584367 10584386 8 88 6.0 1.5 3.8 1.7 107 chr3L 10584279 intron A2bp1 + chr3L 10584332 intron A2bp1 + chr3L 10584386 intron A2bp1 + chr3L_8_10580001 chr3L_10580001 RC1_1-HE 1504 chr3L 10595737 10595751 chr3L 10595879 10595893 4 142 7.0 2.0 4.5 0.7 156 chr3L 10595737 intergenic not near genes chr3L 10595815 intergenic not near genes chr3L 10595893 intergenic not near genes chr3L_4_10595001 chr3L_10595001 RC1_1-HE 1505 chr3L 10600454 10600457 chr3L 10600537 10600540 4 83 5.0 0.5 2.8 1.1 86 chr3L 10600454 intergenic not near genes chr3L 10600497 intergenic not near genes chr3L 10600540 intergenic not near genes chr3L_4_10600001 chr3L_10600001 RC1_1-HE 1506 chr3L 10613544 10613554 chr3L 10613654 10613664 4 110 4.5 2.0 3.2 1.0 120 chr3L 10613544 intergenic not near genes chr3L 10613604 intergenic not near genes chr3L 10613664 intergenic not near genes chr3L_4_10610001 chr3L_10610001 RC1_1-HE 1507 chr3L 10621844 10621880 chr3L 10621932 10621968 8 88 3.0 4.0 3.5 1.8 124 chr3L 10621844 intergenic not near genes chr3L 10621906 intergenic not near genes chr3L 10621968 intergenic not near genes chr3L_8_10620001 chr3L_10620001 RC1_1-HE 1508 chr3L 10649717 10649737 chr3L 10649931 10649945 7 213 1.0 2.0 1.5 2.8 228 chr3L 10649717 intron CG32066 - chr3L 10649831 intron CG32066 - chr3L 10649945 intron CG32066 - chr3L_7_10645001 chr3L_10645001 RC1_1-HE 1509 chr3L 10745538 10745567 chr3L 10745619 10745648 13 81 6.0 3.5 4.8 2.2 110 chr3L 10745538 intergenic not near genes chr3L 10745593 intergenic not near genes chr3L 10745648 intergenic not near genes chr3L_13_10745001 chr3L_10745001 RC1_1-HE 1510 chr3L 10820423 10820432 chr3L 10820833 10820842 7 410 2.5 10.0 6.2 1.0 419 chr3L 10820423 intergenic not near genes chr3L 10820632 intergenic not near genes chr3L 10820842 intergenic not near genes chr3L_7_10820001 chr3L_10820001 RC1_1-HE 1511 chr3L 10942058 10942073 chr3L 10942142 10942157 4 84 14.5 5.5 10.0 0.4 99 chr3L 10942058 intergenic not near genes chr3L 10942108 intergenic not near genes chr3L 10942157 intergenic not near genes chr3L_4_10940001 chr3L_10940001 RC1_1-HE 1512 chr3L 10995242 10995278 chr3L 10995326 10995326 6 72 1.5 3.5 2.5 1.7 84 chr3L 10995242 intron klu - chr3L 10995284 intron klu - chr3L 10995326 intron klu - chr3L_6_10995001 chr3L_10995001 RC1_1-HE 1513 chr3L 11083509 11083540 chr3L 11083608 11083639 11 99 2.5 3.0 2.8 2.9 130 chr3L 11083509 intron JIL-1 - chr3L 11083574 intron JIL-1 - chr3L 11083639 intron JIL-1 - chr3L_11_11080001 chr3L_11080001 RC1_1-HE 1514 chr3L 11087064 11087088 chr3L 11088854 11088878 S-element 16 1790 4.0 1.5 2.8 4.2 1814 chr3L 11087064 intron JIL-1 - chr3L 11087971 intron JIL-1 - chr3L 11088878 intron JIL-1 - chr3L_16_11085001 chr3L_11085001 RC1_1-HE 1515 chr3L 11105291 11105307 chr3L 11107003 11107019 X-element 6 1712 0.0 1.5 0.8 3.3 1728 chr3L 11105291 intergenic not near genes chr3L 11106155 intergenic not near genes chr3L 11107019 3` UTR CG32073 - chr3L_6_11105001 chr3L_11105001 RC1_1-HE 1516 chr3L 11131209 11131236 chr3L 11131441 11131468 6 232 2.5 2.5 2.5 1.7 259 chr3L 11131209 intron,exon CG42575 +,nol + chr3L 11131338 intron,3` UTR CG42575 +,nol + chr3L 11131468 intron CG42575 + chr3L_6_11130001 chr3L_11130001 RC1_1-HE 1517 chr3L 11217323 11217336 chr3L 11217402 11217415 6 79 6.5 2.5 4.5 1.1 92 chr3L 11217323 intron CG42671 + chr3L 11217369 intron CG42671 + chr3L 11217415 intron CG42671 + chr3L_6_11215001 chr3L_11215001 RC1_1-HE 1518 chr3L 11217340 11217350 chr3L 11217401 11217429 4 74 3.5 2.0 2.8 1.1 89 chr3L 11217340 intron CG42671 + chr3L 11217384 intron CG42671 + chr3L 11217429 intron CG42671 + chr3L_4_11215001 chr3L_11215001 RC1_1-HE 1519 chr3L 11235369 11235398 chr3L 11235573 11235602 16 204 6.5 3.5 5.0 2.7 233 chr3L 11235369 intron Ir68a - chr3L 11235486 exon Ir68a - chr3L 11235602 exon Ir68a - chr3L_16_11235001 chr3L_11235001 RC1_1-HE 1520 chr3L 11241778 11241790 chr3L 11241860 11241872 4 82 0.5 4.5 2.5 1.1 94 chr3L 11241778 intergenic not near genes chr3L 11241825 intergenic not near genes chr3L 11241872 intergenic not near genes chr3L_4_11240001 chr3L_11240001 RC1_1-HE 1521 chr3L 11256399 11256409 chr3L 11256494 11256504 6 95 1.5 0.0 0.8 3.3 105 chr3L 11256399 intergenic scyl + chr3L 11256452 intergenic scyl + chr3L 11256504 intergenic scyl + chr3L_6_11255001 chr3L_11255001 RC1_1-HE 1522 chr3L 11264464 11264496 chr3L 11271417 11271449 17.6 5 6953 2.5 1.5 2.0 1.7 6985 chr3L 11264464 intergenic not near genes chr3L 11267956 intergenic not near genes chr3L 11271449 intergenic not near genes chr3L_5_11265001 chr3L_11265001 RC1_1-HE 1523 chr3L 11277470 11277484 chr3L 11278466 11278480 Rt1a 4 996 1.0 1.5 1.2 1.8 1010 chr3L 11277470 intergenic not near genes chr3L 11277975 intergenic not near genes chr3L 11278480 intergenic not near genes chr3L_4_11275001 chr3L_11275001 RC1_1-HE 1524 chr3L 11279721 11279742 chr3L 11279803 11279821 8 82 1.0 0.0 0.5 5.3 100 chr3L 11279721 intergenic not near genes chr3L 11279771 intergenic not near genes chr3L 11279821 intergenic not near genes chr3L_8_11275001 chr3L_11275001 RC1_1-HE 1525 chr3L 11309242 11309272 chr3L 11309319 11309349 16 76 4.5 7.0 5.8 2.4 107 chr3L 11309242 intergenic not near genes chr3L 11309296 intergenic not near genes chr3L 11309349 intergenic not near genes chr3L_16_11305001 chr3L_11305001 RC1_1-HE 1526 chr3L 11329709 11329728 chr3L 11332895 11332928 jockey 8 3203 2.5 3.5 3.0 2.0 3219 chr3L 11329709 intergenic not near genes chr3L 11331318 intergenic not near genes chr3L 11332928 intergenic not near genes chr3L_8_11330001 chr3L_11330001 RC1_1-HE 1527 chr3L 11442793 11442807 chr3L 11442879 11442893 7 86 1.5 0.5 1.0 3.5 100 chr3L 11442793 intergenic not near genes chr3L 11442843 intergenic not near genes chr3L 11442893 intergenic not near genes chr3L_7_11440001 chr3L_11440001 RC1_1-HE 1528 chr3L 11474622 11474650 chr3L 11474712 11474740 10 90 3.5 4.5 4.0 2.0 118 chr3L 11474622 intergenic Vha16-2 + chr3L 11474681 intergenic Vha16-2 + chr3L 11474740 intergenic Vha16-2 + chr3L_10_11470001 chr3L_11470001 RC1_1-HE 1529 chr3L 11475625 11475637 chr3L 11475716 11475729 4 92 2.5 4.5 3.5 0.9 104 chr3L 11475625 intergenic Vha16-2 + chr3L 11475677 intergenic Vha16-2 + chr3L 11475729 intergenic Vha16-2 + chr3L_4_11475001 chr3L_11475001 RC1_1-HE 1530 chr3L 11493171 11493185 chr3L 11493267 11493281 5 96 1.0 1.5 1.2 2.3 110 chr3L 11493171 intron chrb + chr3L 11493226 intron chrb + chr3L 11493281 intron chrb + chr3L_5_11490001 chr3L_11490001 RC1_1-HE 1531 chr3L 11528230 11528253 chr3L 11528312 11528335 6 80 2.5 2.0 2.2 1.9 105 chr3L 11528230 intron Mob2 - chr3L 11528282 intron Mob2 - chr3L 11528335 intron Mob2 - chr3L_6_11525001 chr3L_11525001 RC1_1-HE 1532 chr3L 11541202 11541227 chr3L 11541282 11541299 11 78 1.5 2.5 2.0 3.7 97 chr3L 11541202 intron Mob2 - chr3L 11541250 intron Mob2 - chr3L 11541299 intron Mob2 - chr3L_11_11540001 chr3L_11540001 RC1_1-HE 1533 chr3L 11548672 11548701 chr3L 11548751 11548780 6 79 0.0 2.5 1.2 2.7 108 chr3L 11548672 intron Mob2 - chr3L 11548726 intron Mob2 - chr3L 11548780 intron Mob2 - chr3L_6_11545001 chr3L_11545001 RC1_1-HE 1534 chr3L 11564792 11564810 chr3L 11572408 11572436 412 8 7621 2.0 4.0 3.0 2.0 7644 chr3L 11564792 exon CG33267 + chr3L 11568614 intron CG33267 + chr3L 11572436 exon CG33267 + chr3L_8_11565001 chr3L_11565001 RC1_1-HE 1535 chr3L 11587919 11587953 chr3L 11587996 11588030 8 77 0.5 1.0 0.8 4.4 111 chr3L 11587919 intergenic rt - chr3L 11587974 intergenic rt - chr3L 11588030 intergenic rt - chr3L_8_11585001 chr3L_11585001 RC1_1-HE 1536 chr3L 11671029 11671052 chr3L 11671180 11671203 5 151 2.5 2.0 2.2 1.6 174 chr3L 11671029 intron CG32085 - chr3L 11671116 intron CG32085 - chr3L 11671203 intron CG32085 - chr3L_5_11670001 chr3L_11670001 RC1_1-HE 1537 chr3L 11676794 11676828 chr3L 11676877 11676911 15 83 5.5 4.0 4.8 2.6 117 chr3L 11676794 intron CG32085 - chr3L 11676852 intron CG32085 - chr3L 11676911 intron CG32085 - chr3L_15_11675001 chr3L_11675001 RC1_1-HE 1538 chr3L 11678094 11678123 chr3L 11678182 11678211 15 88 3.5 3.5 3.5 3.3 117 chr3L 11678094 intron CG32085 - chr3L 11678152 intron CG32085 - chr3L 11678211 intron CG32085 - chr3L_15_11675001 chr3L_11675001 RC1_1-HE 1539 chr3L 11717758 11717794 chr3L 11717857 11717893 18 98 3.5 2.0 2.8 4.7 135 chr3L 11717758 intergenic not near genes chr3L 11717826 intergenic not near genes chr3L 11717893 intergenic not near genes chr3L_18_11715001 chr3L_11715001 RC1_1-HE 1540 chr3L 11723080 11723113 chr3L 11727876 11727909 Doc 18 4796 8.0 5.0 6.5 2.4 4829 chr3L 11723080 3` UTR Bmcp + chr3L 11725494 intron Bmcp + chr3L 11727909 3` UTR Bmcp + chr3L_18_11725001 chr3L_11725001 RC1_1-HE 1541 chr3L 11811368 11811405 chr3L 11811448 11811483 15 80 3.0 5.5 4.2 2.9 115 chr3L 11811368 exon CG42255 - chr3L 11811426 intron CG42255 - chr3L 11811483 intron CG42255 - chr3L_15_11810001 chr3L_11810001 RC1_1-HE 1542 chr3L 11833734 11833746 chr3L 11833839 11833851 7 105 1.5 5.0 3.2 1.7 117 chr3L 11833734 intergenic CycA - chr3L 11833792 intergenic CycA - chr3L 11833851 intergenic CycA - chr3L_7_11830001 chr3L_11830001 RC1_1-HE 1543 chr3L 11846405 11846420 chr3L 11846514 11846529 5 109 0.0 2.0 1.0 2.5 124 chr3L 11846405 intergenic not near genes chr3L 11846467 intergenic not near genes chr3L 11846529 intergenic not near genes chr3L_5_11845001 chr3L_11845001 RC1_1-HE 1544 chr3L 11849333 11849349 chr3L 11849434 11849450 6 100 3.0 3.0 3.0 1.5 117 chr3L 11849333 intergenic not near genes chr3L 11849392 intergenic not near genes chr3L 11849450 intergenic not near genes chr3L_6_11845001 chr3L_11845001 RC1_1-HE 1545 chr3L 11850145 11850170 chr3L 11850240 11850266 12 96 5.0 0.0 2.5 3.4 121 chr3L 11850145 intergenic not near genes chr3L 11850206 intergenic CG44837 - chr3L 11850266 intergenic CG44837 - chr3L_12_11850001 chr3L_11850001 RC1_1-HE 1546 chr3L 11864551 11864577 chr3L 11865847 11865873 pogo 16 1296 4.5 4.0 4.2 3.1 1322 chr3L 11864551 intron CG44837 - chr3L 11865212 intron CG44837 - chr3L 11865873 intron CG44837 - chr3L_16_11865001 chr3L_11865001 RC1_1-HE 1547 chr3L 11872478 11872484 chr3L 11873021 11873027 4 543 6.5 3.5 5.0 0.7 549 chr3L 11872478 intron CG44837 - chr3L 11872752 intron CG44837 - chr3L 11873027 intron CG44837 - chr3L_4_11870001 chr3L_11870001 RC1_1-HE 1548 chr3L 11887260 11887288 chr3L 11887358 11887391 4 99 0.0 1.0 0.5 2.7 131 chr3L 11887260 intron,3` UTR CG44837 -,CG5897 - chr3L 11887326 intron,3` UTR CG44837 -,CG5897 - chr3L 11887391 intron,3` UTR CG44837 -,CG5897 - chr3L_4_11885001 chr3L_11885001 RC1_1-HE 1549 chr3L 11943495 11943520 chr3L 11943597 11943622 6 102 0.5 2.5 1.5 2.4 127 chr3L 11943495 intergenic Rpt4R +,CG5883 - chr3L 11943558 intergenic Rpt4R +,CG5883 - chr3L 11943622 intergenic CG5883 -,Rpt4R + chr3L_6_11940001 chr3L_11940001 RC1_1-HE 1550 chr3L 11973720 11973732 chr3L 11973948 11973960 4 228 1.0 1.0 1.0 2.0 240 chr3L 11973720 intron CG42397 - chr3L 11973840 intergenic CG42397 - chr3L 11973960 intergenic CG42397 - chr3L_4_11970001 chr3L_11970001 RC1_1-HE 1551 chr3L 11984099 11984114 chr3L 11984178 11984193 6 78 2.0 2.0 2.0 2.0 94 chr3L 11984099 intergenic CG43896 + chr3L 11984146 intergenic CG43896 + chr3L 11984193 intergenic CG43896 + chr3L_6_11980001 chr3L_11980001 RC1_1-HE 1552 chr3L 11984579 11984588 chr3L 11984671 11984680 5 92 1.0 0.0 0.5 3.3 101 chr3L 11984579 intergenic CG6938 + chr3L 11984630 intergenic CG6938 + chr3L 11984680 intergenic CG6938 + chr3L_5_11980001 chr3L_11980001 RC1_1-HE 1553 chr3L 12013914 12013926 chr3L 12014006 12014018 4 92 4.5 4.0 4.2 0.8 104 chr3L 12013914 intron rols - chr3L 12013966 intron rols - chr3L 12014018 intron rols - chr3L_4_12010001 chr3L_12010001 RC1_1-HE 1554 chr3L 12084230 12084251 chr3L 12084310 12084331 4 80 2.5 2.0 2.2 1.2 101 chr3L 12084230 intergenic not near genes chr3L 12084280 intergenic not near genes chr3L 12084331 intergenic not near genes chr3L_4_12080001 chr3L_12080001 RC1_1-HE 1555 chr3L 12095434 12095458 chr3L 12095531 12095555 10 97 1.5 3.0 2.2 3.1 121 chr3L 12095434 intergenic not near genes chr3L 12095494 intergenic not near genes chr3L 12095555 intergenic not near genes chr3L_10_12095001 chr3L_12095001 RC1_1-HE 1556 chr3L 12096174 12096200 chr3L 12096312 12096338 6 138 1.5 4.0 2.8 1.6 164 chr3L 12096174 intergenic not near genes chr3L 12096256 intergenic not near genes chr3L 12096338 intergenic not near genes chr3L_6_12095001 chr3L_12095001 RC1_1-HE 1557 chr3L 12170792 12170823 chr3L 12170875 12170906 9 82 0.0 4.0 2.0 3.0 114 chr3L 12170792 intron Rh7 - chr3L 12170849 intron Rh7 - chr3L 12170906 intron Rh7 - chr3L_9_12170001 chr3L_12170001 RC1_1-HE 1558 chr3L 12195284 12195292 chr3L 12195362 12195370 7 78 8.5 4.0 6.2 1.0 86 chr3L 12195284 intergenic not near genes chr3L 12195327 intergenic CR45746 - chr3L 12195370 intergenic CR45746 - chr3L_7_12195001 chr3L_12195001 RC1_1-HE 1559 chr3L 12239803 12239805 chr3L 12239883 12239885 4 80 7.5 3.0 5.2 0.6 82 chr3L 12239803 intron app - chr3L 12239844 intron app - chr3L 12239885 intron app - chr3L_4_12235001 chr3L_12235001 RC1_1-HE 1560 chr3L 12259472 12259503 chr3L 12259637 12259668 15 165 4.5 3.0 3.8 3.1 196 chr3L 12259472 intron app - chr3L 12259570 intron app - chr3L 12259668 intron app - chr3L_15_12255001 chr3L_12255001 RC1_1-HE 1561 chr3L 12309163 12309196 chr3L 12309241 12309274 19 78 7.5 8.5 8.0 2.1 111 chr3L 12309163 intergenic not near genes chr3L 12309218 intergenic not near genes chr3L 12309274 intergenic not near genes chr3L_19_12305001 chr3L_12305001 RC1_1-HE 1562 chr3L 12344967 12345003 chr3L 12345052 12345088 10 85 3.5 2.0 2.8 2.6 121 chr3L 12344967 intron CrzR - chr3L 12345028 intron CrzR - chr3L 12345088 intron CrzR - chr3L_10_12345001 chr3L_12345001 RC1_1-HE 1563 chr3L 12349207 12349235 chr3L 12349304 12349332 11 97 4.5 5.5 5.0 1.8 125 chr3L 12349207 intron CrzR - chr3L 12349270 intron CrzR - chr3L 12349332 intron CrzR - chr3L_11_12345001 chr3L_12345001 RC1_1-HE 1564 chr3L 12353919 12353937 chr3L 12354009 12354027 5 90 1.5 2.5 2.0 1.7 108 chr3L 12353919 intergenic not near genes chr3L 12353973 intergenic not near genes chr3L 12354027 intergenic not near genes chr3L_5_12350001 chr3L_12350001 RC1_1-HE 1565 chr3L 12381541 12381552 chr3L 12381620 12381631 4 79 1.0 4.5 2.8 1.1 90 chr3L 12381541 intron Ncc69 - chr3L 12381586 intron Ncc69 - chr3L 12381631 intron Ncc69 - chr3L_4_12380001 chr3L_12380001 RC1_1-HE 1566 chr3L 12430111 12430142 chr3L 12430199 12430230 20 87 4.5 3.5 4.0 4.0 119 chr3L 12430111 intron toe - chr3L 12430170 intron toe - chr3L 12430230 intron toe - chr3L_20_12430001 chr3L_12430001 RC1_1-HE 1567 chr3L 12446269 12446291 chr3L 12446348 12446370 13 76 3.5 2.5 3.0 3.2 101 chr3L 12446269 intergenic not near genes chr3L 12446320 intergenic not near genes chr3L 12446370 intergenic not near genes chr3L_13_12445001 chr3L_12445001 RC1_1-HE 1568 chr3L 12446292 12446299 chr3L 12446347 12446354 4 54 1.5 2.5 2.0 1.3 62 chr3L 12446292 intergenic not near genes chr3L 12446323 intergenic not near genes chr3L 12446354 intergenic not near genes chr3L_4_12445001 chr3L_12445001 RC1_1-HE 1569 chr3L 12458484 12458497 chr3L 12458583 12458596 5 99 3.5 4.0 3.8 1.0 112 chr3L 12458484 intergenic not near genes chr3L 12458540 intergenic not near genes chr3L 12458596 intergenic not near genes chr3L_5_12455001 chr3L_12455001 RC1_1-HE 1570 chr3L 12488414 12488441 chr3L 12488542 12488569 9 128 3.0 1.5 2.2 2.8 155 chr3L 12488414 intron CG10660 - chr3L 12488492 intron CG10660 - chr3L 12488569 exon CG10660 - chr3L_9_12485001 chr3L_12485001 RC1_1-HE 1571 chr3L 12541517 12541532 chr3L 12541613 12541628 6 96 0.0 0.0 0.0 6.0 111 chr3L 12541517 intron sowah - chr3L 12541572 intron sowah - chr3L 12541628 intron sowah - chr3L_6_12540001 chr3L_12540001 RC1_1-HE 1572 chr3L 12541891 12541913 chr3L 12541968 12541996 6 82 4.0 3.5 3.8 1.2 105 chr3L 12541891 intron,5` UTR sowah -,CR43612 + chr3L 12541944 intron,5` UTR sowah -,CR43612 + chr3L 12541996 intron,5` UTR sowah -,CR43612 + chr3L_6_12540001 chr3L_12540001 RC1_1-HE 1573 chr3L 12626151 12626165 chr3L 12626261 12626275 6 110 3.5 0.5 2.0 2.0 124 chr3L 12626151 intergenic not near genes chr3L 12626213 intergenic not near genes chr3L 12626275 intergenic not near genes chr3L_6_12625001 chr3L_12625001 RC1_1-HE 1574 chr3L 12801981 12802013 chr3L 12802058 12802090 6 77 1.5 2.5 2.0 2.0 109 chr3L 12801981 intron Atg1 - chr3L 12802036 intron Atg1 - chr3L 12802090 intron Atg1 - chr3L_6_12800001 chr3L_12800001 RC1_1-HE 1575 chr3L 12870332 12870347 chr3L 12870428 12870443 6 96 6.0 3.5 4.8 1.0 111 chr3L 12870332 intergenic not near genes chr3L 12870388 intergenic not near genes chr3L 12870443 intergenic not near genes chr3L_6_12870001 chr3L_12870001 RC1_1-HE 1576 chr3L 12874922 12874958 chr3L 12877215 12877251 jockey 20 2293 3.0 4.0 3.5 4.4 2329 chr3L 12874922 intergenic not near genes chr3L 12876086 intergenic not near genes chr3L 12877251 intergenic not near genes chr3L_20_12875001 chr3L_12875001 RC1_1-HE 1577 chr3L 12908859 12908896 chr3L 12908939 12908976 15 80 4.0 2.0 3.0 3.8 117 chr3L 12908859 intergenic not near genes chr3L 12908918 intergenic not near genes chr3L 12908976 intergenic not near genes chr3L_15_12905001 chr3L_12905001 RC1_1-HE 1578 chr3L 12919273 12919303 chr3L 12924747 12924777 Rt1c 16 5473 8.0 4.0 6.0 2.3 5504 chr3L 12919273 intergenic not near genes chr3L 12922025 intergenic not near genes chr3L 12924777 intergenic not near genes chr3L_16_12920001 chr3L_12920001 RC1_1-HE 1579 chr3L 12937601 12937614 chr3L 12937678 12937691 9 77 3.5 0.0 1.8 3.2 90 chr3L 12937601 intergenic not near genes chr3L 12937646 intergenic not near genes chr3L 12937691 intergenic not near genes chr3L_9_12935001 chr3L_12935001 RC1_1-HE 1580 chr3L 12957794 12957815 chr3L 12962277 12962298 copia 10 4483 3.5 9.0 6.2 1.4 4504 chr3L 12957794 intergenic not near genes chr3L 12960046 intergenic not near genes chr3L 12962298 intergenic not near genes chr3L_10_12960001 chr3L_12960001 RC1_1-HE 1581 chr3L 12963002 12963033 chr3L 12963102 12963133 7 99 3.0 0.5 1.8 2.5 131 chr3L 12963002 intergenic not near genes chr3L 12963068 intergenic not near genes chr3L 12963133 intergenic not near genes chr3L_7_12960001 chr3L_12960001 RC1_1-HE 1582 chr3L 12966132 12966152 chr3L 12966222 12966242 6 90 6.0 1.5 3.8 1.2 110 chr3L 12966132 intron Or69a - chr3L 12966187 intron Or69a - chr3L 12966242 intron Or69a - chr3L_6_12965001 chr3L_12965001 RC1_1-HE 1583 chr3L 13007693 13007721 chr3L 13007773 13007801 4 80 1.5 3.5 2.5 1.1 108 chr3L 13007693 exon CG11263 + chr3L 13007747 3` UTR CG11263 + chr3L 13007801 3` UTR CG11263 + chr3L_4_13005001 chr3L_13005001 RC1_1-HE 1584 chr3L 13036522 13036550 chr3L 13036653 13036681 10 131 1.0 3.0 2.0 3.3 159 chr3L 13036522 intergenic CG17672 +,SRm160 + chr3L 13036602 intergenic CG17672 +,SRm160 + chr3L 13036681 intergenic SRm160 +,CG17672 + chr3L_10_13035001 chr3L_13035001 RC1_1-HE 1585 chr3L 13045986 13046021 chr3L 13046154 13046189 15 167 2.5 0.5 1.5 6.0 203 chr3L 13045986 intron Syx13 + chr3L 13046088 intron Syx13 + chr3L 13046189 intron Syx13 + chr3L_15_13045001 chr3L_13045001 RC1_1-HE 1586 chr3L 13095818 13095837 chr3L 13095907 13095926 17 89 8.5 0.0 4.2 3.3 108 chr3L 13095818 intergenic not near genes chr3L 13095872 intergenic not near genes chr3L 13095926 intergenic not near genes chr3L_17_13095001 chr3L_13095001 RC1_1-HE 1587 chr3L 13156463 13156484 chr3L 13156555 13156576 7 92 7.5 3.0 5.2 1.1 113 chr3L 13156463 intergenic not near genes chr3L 13156520 intergenic not near genes chr3L 13156576 intergenic not near genes chr3L_7_13155001 chr3L_13155001 RC1_1-HE 1588 chr3L 13161770 13161796 chr3L 13161848 13161874 18 78 5.5 8.5 7.0 2.2 104 chr3L 13161770 intergenic not near genes chr3L 13161822 intergenic not near genes chr3L 13161874 intergenic not near genes chr3L_18_13160001 chr3L_13160001 RC1_1-HE 1589 chr3L 13166277 13166304 chr3L 13166358 13166385 6 78 2.0 4.5 3.2 1.4 108 chr3L 13166277 intergenic not near genes chr3L 13166331 intergenic not near genes chr3L 13166385 intergenic not near genes chr3L_6_13165001 chr3L_13165001 RC1_1-HE 1590 chr3L 13198594 13198625 chr3L 13198691 13198722 21 97 6.5 8.0 7.2 2.6 128 chr3L 13198594 intergenic not near genes chr3L 13198658 intergenic not near genes chr3L 13198722 intergenic not near genes chr3L_21_13195001 chr3L_13195001 RC1_1-HE 1591 chr3L 13206235 13206263 chr3L 13206318 13206346 5 83 3.0 0.0 1.5 2.0 111 chr3L 13206235 intergenic not near genes chr3L 13206290 intergenic not near genes chr3L 13206346 intergenic not near genes chr3L_5_13205001 chr3L_13205001 RC1_1-HE 1592 chr3L 13221490 13221507 chr3L 13221617 13221623 6 125 5.5 4.0 4.8 1.0 133 chr3L 13221490 intergenic not near genes chr3L 13221556 intergenic not near genes chr3L 13221623 intergenic not near genes chr3L_6_13220001 chr3L_13220001 RC1_1-HE 1593 chr3L 13226230 13226248 chr3L 13226328 13226346 6 98 5.0 3.0 4.0 1.2 116 chr3L 13226230 intergenic not near genes chr3L 13226288 intergenic not near genes chr3L 13226346 intergenic not near genes chr3L_6_13225001 chr3L_13225001 RC1_1-HE 1594 chr3L 5954086 5954089 chr3L 13233957 13233960 4 7279871 5.0 20.5 12.8 0.3 7279874 chr3L 5954086 intergenic not near genes chr3L 9594023 intron CG42673 + chr3L 13233960 intron caps + chr3L_4_9590001 chr3L_9590001 RC1_1-HE 1595 chr3L 13241181 13241212 chr3L 13241269 13241300 7 88 7.0 3.0 5.0 1.2 119 chr3L 13241181 intron caps + chr3L 13241240 intron caps + chr3L 13241300 intron caps + chr3L_7_13240001 chr3L_13240001 RC1_1-HE 1596 chr3L 13246679 13246697 chr3L 13246784 13246802 9 105 4.0 7.5 5.8 1.3 123 chr3L 13246679 intron caps + chr3L 13246740 intron caps + chr3L 13246802 intron caps + chr3L_9_13245001 chr3L_13245001 RC1_1-HE 1597 chr3L 13267290 13267318 chr3L 13267404 13267432 11 114 2.0 2.5 2.2 3.4 142 chr3L 13267290 intron caps + chr3L 13267361 intron caps + chr3L 13267432 intron caps + chr3L_11_13265001 chr3L_13265001 RC1_1-HE 1598 chr3L 13280300 13280330 chr3L 13280405 13280435 13 105 7.5 4.5 6.0 1.9 135 chr3L 13280300 intergenic not near genes chr3L 13280368 intergenic not near genes chr3L 13280435 intergenic not near genes chr3L_13_13280001 chr3L_13280001 RC1_1-HE 1599 chr3L 13296519 13296543 chr3L 13296611 13296635 8 92 5.0 4.0 4.5 1.5 116 chr3L 13296519 intergenic Sfp70A4 -,CR45253 + chr3L 13296577 3` UTR Sfp70A4 - chr3L 13296635 3` UTR Sfp70A4 - chr3L_8_13295001 chr3L_13295001 RC1_1-HE 1600 chr3L 13315943 13315952 chr3L 13316191 13316217 4 261 0.0 4.0 2.0 1.3 274 chr3L 13315943 intergenic not near genes chr3L 13316080 intergenic not near genes chr3L 13316217 intergenic not near genes chr3L_4_13315001 chr3L_13315001 RC1_1-HE 1601 chr3L 13338631 13338660 chr3L 13338709 13338738 14 78 3.5 4.0 3.8 2.9 107 chr3L 13338631 intergenic not near genes chr3L 13338684 intergenic not near genes chr3L 13338738 intergenic not near genes chr3L_14_13335001 chr3L_13335001 RC1_1-HE 1602 chr3L 13357406 13357420 chr3L 13357486 13357500 6 80 1.5 1.0 1.2 2.7 94 chr3L 13357406 intergenic Nplp2 + chr3L 13357453 intergenic Nplp2 + chr3L 13357500 intergenic Nplp2 + chr3L_6_13355001 chr3L_13355001 RC1_1-HE 1603 chr3L 13496877 13496889 chr3L 13496984 13496996 6 107 2.5 9.0 5.8 0.9 119 chr3L 13496877 intron Tgi + chr3L 13496936 intron Tgi + chr3L 13496996 intron Tgi + chr3L_6_13495001 chr3L_13495001 RC1_1-HE 1604 chr3L 13525155 13525188 chr3L 13532952 13532985 roo 11 7795 4.0 4.5 4.2 2.1 7830 chr3L 13525155 intergenic not near genes chr3L 13529070 intergenic not near genes chr3L 13532985 intergenic not near genes chr3L_11_13525001 chr3L_13525001 RC1_1-HE 1605 chr3L 13596034 13596070 chr3L 13596150 13596186 17 116 7.5 6.0 6.8 2.2 152 chr3L 13596034 intron bru-3 - chr3L 13596110 intron bru-3 - chr3L 13596186 intron bru-3 - chr3L_17_13595001 chr3L_13595001 RC1_1-HE 1606 chr3L 13614211 13614217 chr3L 13614292 13614298 6 81 8.5 16.0 12.2 0.5 87 chr3L 13614211 intron bru-3 - chr3L 13614254 intron bru-3 - chr3L 13614298 intron bru-3 - chr3L_6_13610001 chr3L_13610001 RC1_1-HE 1607 chr3L 13614218 13614221 chr3L 13614287 13614302 4 78 8.0 14.5 11.2 0.3 84 chr3L 13614218 intron bru-3 - chr3L 13614260 intron bru-3 - chr3L 13614302 intron bru-3 - chr3L_4_13610001 chr3L_13610001 RC1_1-HE 1608 chr3L 13614222 13614235 chr3L 13614286 13614316 7 78 3.0 14.0 8.5 0.7 94 chr3L 13614222 intron bru-3 - chr3L 13614269 intron bru-3 - chr3L 13614316 intron bru-3 - chr3L_7_13610001 chr3L_13610001 RC1_1-HE 1609 chr3L 13629532 13629534 chr3L 13629644 13629646 4 112 8.5 17.5 13.0 0.3 114 chr3L 13629532 intron bru-3 - chr3L 13629589 intron bru-3 - chr3L 13629646 intron bru-3 - chr3L_4_13625001 chr3L_13625001 RC1_1-HE 1610 chr3L 13629537 13629549 chr3L 13629642 13629661 9 111 5.0 17.0 11.0 0.8 124 chr3L 13629537 intron bru-3 - chr3L 13629599 intron bru-3 - chr3L 13629661 intron bru-3 - chr3L_9_13625001 chr3L_13625001 RC1_1-HE 1611 chr3L 13696695 13696728 chr3L 13696788 13696821 17 93 5.5 10.0 7.8 1.9 126 chr3L 13696695 intron bru-3 - chr3L 13696758 intron bru-3 - chr3L 13696821 intron bru-3 - chr3L_17_13695001 chr3L_13695001 RC1_1-HE 1612 chr3L 13706071 13706100 chr3L 13706152 13706182 22 82 8.0 7.0 7.5 2.6 111 chr3L 13706071 intron bru-3 - chr3L 13706126 intron bru-3 - chr3L 13706182 intron bru-3 - chr3L_22_13705001 chr3L_13705001 RC1_1-HE 1613 chr3L 13748587 13748601 chr3L 13748664 13748678 8 77 5.5 3.0 4.2 1.5 91 chr3L 13748587 intron bru-3 - chr3L 13748632 intron bru-3 - chr3L 13748678 intron bru-3 - chr3L_8_13745001 chr3L_13745001 RC1_1-HE 1614 chr3L 13752494 13752529 chr3L 13752573 13752608 4 79 2.5 3.5 3.0 1.0 114 chr3L 13752494 intron bru-3 - chr3L 13752551 intron bru-3 - chr3L 13752608 intron bru-3 - chr3L_4_13750001 chr3L_13750001 RC1_1-HE 1615 chr3L 13804543 13804577 chr3L 13822830 13822864 roo 21 18287 3.5 3.5 3.5 4.7 18321 chr3L 13804543 intergenic not near genes chr3L 13813704 intergenic not near genes chr3L 13822864 intergenic not near genes chr3L_21_13810001 chr3L_13810001 RC1_1-HE 1616 chr3L 13828687 13828719 chr3L 13828764 13828796 14 77 1.0 4.0 2.5 4.0 109 chr3L 13828687 intergenic not near genes chr3L 13828742 intergenic not near genes chr3L 13828796 intergenic not near genes chr3L_14_13825001 chr3L_13825001 RC1_1-HE 1617 chr3L 13837268 13837290 chr3L 13837346 13837368 8 78 0.0 2.5 1.2 3.6 100 chr3L 13837268 intergenic CG43184 + chr3L 13837318 intergenic CG43184 + chr3L 13837368 intergenic CG43184 + chr3L_8_13835001 chr3L_13835001 RC1_1-HE 1618 chr3L 13884380 13884387 chr3L 13884472 13884479 4 92 6.5 4.0 5.2 0.6 99 chr3L 13884380 intron dysc - chr3L 13884430 intron dysc - chr3L 13884479 intron dysc - chr3L_4_13880001 chr3L_13880001 RC1_1-HE 1619 chr3L 13920419 13920430 chr3L 13920500 13920511 6 81 4.5 5.5 5.0 1.0 92 chr3L 13920419 intron Rgl - chr3L 13920465 intron Rgl - chr3L 13920511 intron Rgl - chr3L_6_13920001 chr3L_13920001 RC1_1-HE 1620 chr3L 13948961 13948980 chr3L 13949122 13949141 13 161 6.0 7.5 6.8 1.7 180 chr3L 13948961 intron CG32137 + chr3L 13949051 intron CG32137 + chr3L 13949141 intron CG32137 + chr3L_13_13945001 chr3L_13945001 RC1_1-HE 1621 chr3L 13962709 13962741 chr3L 13962787 13962819 16 78 2.5 4.0 3.2 3.8 110 chr3L 13962709 3` UTR Meics - chr3L 13962764 3` UTR Meics - chr3L 13962819 exon Meics - chr3L_16_13960001 chr3L_13960001 RC1_1-HE 1622 chr3L 13965963 13965989 chr3L 13966145 13966171 11 182 2.5 2.5 2.5 3.1 208 chr3L 13965963 5` UTR,intron Nxf3 +,ssp2 + chr3L 13966067 5` UTR,intron Nxf3 +,ssp2 + chr3L 13966171 5` UTR,intron Nxf3 +,ssp2 + chr3L_11_13965001 chr3L_13965001 RC1_1-HE 1623 chr3L 13988470 13988495 chr3L 13988592 13988617 8 122 3.5 2.5 3.0 2.0 147 chr3L 13988470 intron,3` UTR CG17364 -,CG9040 + chr3L 13988544 intron,3` UTR CG17364 -,CG9040 + chr3L 13988617 intron,3` UTR CG17364 -,CG9040 + chr3L_8_13985001 chr3L_13985001 RC1_1-HE 1624 chr3L 14050281 14050315 chr3L 14050394 14050428 16 113 2.5 4.5 3.5 3.6 147 chr3L 14050281 intergenic blue - chr3L 14050354 intergenic blue - chr3L 14050428 intergenic not near genes chr3L_16_14050001 chr3L_14050001 RC1_1-HE 1625 chr3L 14211441 14211465 chr3L 14211520 14211533 8 78 3.5 3.5 3.5 1.8 92 chr3L 14211441 intron nuf + chr3L 14211487 intron nuf + chr3L 14211533 intron nuf + chr3L_8_14210001 chr3L_14210001 RC1_1-HE 1626 chr3L 14245565 14245594 chr3L 14245660 14245689 1360 10 95 10.5 6.5 8.5 1.1 124 chr3L 14245565 3` UTR CR44561 - chr3L 14245627 3` UTR CR44561 - chr3L 14245689 3` UTR CR44561 - chr3L_10_14245001 chr3L_14245001 RC1_1-HE 1627 chr3L 14282591 14282594 chr3L 14282671 14282675 4 80 9.5 11.0 10.2 0.4 84 chr3L 14282591 intron fz + chr3L 14282633 intron fz + chr3L 14282675 intron fz + chr3L_4_14280001 chr3L_14280001 RC1_1-HE 1628 chr3L 14282596 14282607 chr3L 14282670 14282688 10 80 8.5 11.0 9.8 0.9 92 chr3L 14282596 intron fz + chr3L 14282642 intron fz + chr3L 14282688 intron fz + chr3L_10_14280001 chr3L_14280001 RC1_1-HE 1629 chr3L 14287005 14287033 chr3L 14287093 14287121 14 88 4.5 4.5 4.5 2.5 116 chr3L 14287005 intron fz + chr3L 14287063 intron fz + chr3L 14287121 intron fz + chr3L_14_14285001 chr3L_14285001 RC1_1-HE 1630 chr3L 14295979 14296012 chr3L 14296466 14296508 roo 15 491 9.5 0.0 4.8 2.6 529 chr3L 14295979 intron fz + chr3L 14296244 intron fz + chr3L 14296508 intron fz + chr3L_15_14295001 chr3L_14295001 RC1_1-HE 1631 chr3L 14312023 14312058 chr3L 14316835 14316840 X-element 15 4811 2.5 2.5 2.5 4.3 4817 chr3L 14312023 exon fz + chr3L 14314432 intron fz + chr3L 14316840 intron fz + chr3L_15_14310001 chr3L_14310001 RC1_1-HE 1632 chr3L 14331200 14331203 chr3L 14331970 14331972 4 770 15.5 9.0 12.2 0.3 772 chr3L 14331200 intron fz + chr3L 14331586 intron fz + chr3L 14331972 intron fz + chr3L_4_14330001 chr3L_14330001 RC1_1-HE 1633 chr3L 14331205 14331223 chr3L 14331969 14331993 20 770 8.0 9.0 8.5 2.1 788 chr3L 14331205 intron fz + chr3L 14331599 intron fz + chr3L 14331993 intron fz + chr3L_20_14330001 chr3L_14330001 RC1_1-HE 1634 chr3L 14341414 14341437 chr3L 14341550 14341573 12 136 0.5 3.5 2.0 4.0 159 chr3L 14341414 intron fz + chr3L 14341494 intron fz + chr3L 14341573 intron fz + chr3L_12_14340001 chr3L_14340001 RC1_1-HE 1635 chr3L 14387486 14387495 chr3L 14387646 14387655 8 160 5.5 3.0 4.2 1.5 169 chr3L 14387486 intergenic not near genes chr3L 14387570 intergenic not near genes chr3L 14387655 intergenic not near genes chr3L_8_14385001 chr3L_14385001 RC1_1-HE 1636 chr3L 14429008 14429037 chr3L 14429104 14429133 14 95 5.0 6.5 5.8 2.1 125 chr3L 14429008 intron bbg - chr3L 14429070 intron bbg - chr3L 14429133 intron bbg - chr3L_14_14425001 chr3L_14425001 RC1_1-HE 1637 chr3L 14430001 14430006 chr3L 14430080 14430085 5 79 2.0 0.0 1.0 2.5 84 chr3L 14430001 intron bbg - chr3L 14430043 intron bbg - chr3L 14430085 intron bbg - chr3L_5_14430001 chr3L_14430001 RC1_1-HE 1638 chr3L 14455363 14455375 chr3L 14455445 14455457 6 82 9.5 0.0 4.8 1.0 94 chr3L 14455363 intron bbg - chr3L 14455410 intron bbg - chr3L 14455457 intron bbg - chr3L_6_14455001 chr3L_14455001 RC1_1-HE 1639 chr3L 14468445 14468478 chr3L 14473652 14473685 copia 15 5207 6.0 5.5 5.8 2.2 5240 chr3L 14468445 intron bbg - chr3L 14471065 intron bbg - chr3L 14473685 intron bbg - chr3L_15_14470001 chr3L_14470001 RC1_1-HE 1640 chr3L 14486019 14486171 chr3L 14486109 14486249 26 86 1.5 1.5 1.5 10.4 230 chr3L 14486019 intron bbg - chr3L 14486134 intron bbg - chr3L 14486249 intron bbg - chr3L_26_14485001 chr3L_14485001 RC1_1-HE 1641 chr3L 14487620 14487625 chr3L 14487697 14487702 5 77 16.0 0.5 8.2 0.5 82 chr3L 14487620 intron bbg - chr3L 14487661 intron bbg - chr3L 14487702 intron bbg - chr3L_5_14485001 chr3L_14485001 RC1_1-HE 1642 chr3L 14499910 14499919 chr3L 14499989 14499998 5 79 9.5 0.0 4.8 0.9 88 chr3L 14499910 intron bbg - chr3L 14499954 intron bbg - chr3L 14499998 intron bbg - chr3L_5_14495001 chr3L_14495001 RC1_1-HE 1643 chr3L 14533890 14533928 chr3L 14533973 14534011 11 82 3.0 4.0 3.5 2.4 121 chr3L 14533890 intron bbg - chr3L 14533950 intron bbg - chr3L 14534011 intron bbg - chr3L_11_14530001 chr3L_14530001 RC1_1-HE 1644 chr3L 14546609 14546804 chr3L 14546691 14546886 18 81 1.0 2.5 1.8 6.4 277 chr3L 14546609 intron CG9238 - chr3L 14546748 intron CG9238 - chr3L 14546886 intron CG9238 - chr3L_18_14545001 chr3L_14545001 RC1_1-HE 1645 chr3L 14572774 14572788 chr3L 14572940 14572954 9 166 5.5 0.0 2.8 2.4 180 chr3L 14572774 intergenic not near genes chr3L 14572864 intergenic not near genes chr3L 14572954 intergenic not near genes chr3L_9_14570001 chr3L_14570001 RC1_1-HE 1646 chr3L 14687795 14687812 chr3L 14688278 14688295 6 483 7.5 5.5 6.5 0.8 500 chr3L 14687795 intron ome + chr3L 14688045 intron ome + chr3L 14688295 intron ome + chr3L_6_14685001 chr3L_14685001 RC1_1-HE 1647 chr3L 14695386 14695415 chr3L 14695482 14695511 15 96 4.5 4.5 4.5 2.7 125 chr3L 14695386 intron ome + chr3L 14695448 intron ome + chr3L 14695511 intron ome + chr3L_15_14695001 chr3L_14695001 RC1_1-HE 1648 chr3L 14721180 14721202 chr3L 14723024 14723044 Rt1c 8 1844 7.0 2.5 4.8 1.4 1864 chr3L 14721180 intron ome + chr3L 14722112 intron ome + chr3L 14723044 intron ome + chr3L_8_14720001 chr3L_14720001 RC1_1-HE 1649 chr3L 14725599 14725617 chr3L 14728594 14728612 Doc 8 2995 2.0 9.0 5.5 1.2 3013 chr3L 14725599 intron ome + chr3L 14727106 intron ome + chr3L 14728612 intron ome + chr3L_8_14725001 chr3L_14725001 RC1_1-HE 1650 chr3L 14738936 14738960 chr3L 14739020 14739044 14 84 0.0 5.0 2.5 4.0 108 chr3L 14738936 intron ome + chr3L 14738990 intron ome + chr3L 14739044 intron ome + chr3L_14_14735001 chr3L_14735001 RC1_1-HE 1651 chr3L 14738963 14738970 chr3L 14739047 14739054 4 84 0.0 11.0 5.5 0.6 91 chr3L 14738963 intron ome + chr3L 14739008 intron ome + chr3L 14739054 intron ome + chr3L_4_14735001 chr3L_14735001 RC1_1-HE 1652 chr3L 14776397 14776410 chr3L 14776474 14776486 4 76 3.5 5.0 4.2 0.8 89 chr3L 14776397 intergenic bmm -,mop - chr3L 14776442 intergenic bmm -,mop - chr3L 14776486 intergenic bmm -,mop - chr3L_4_14775001 chr3L_14775001 RC1_1-HE 1653 chr3L 14839042 14839049 chr3L 14839132 14839139 5 90 4.5 6.5 5.5 0.8 97 chr3L 14839042 intron CG17839 + chr3L 14839090 intron CG17839 + chr3L 14839139 intron CG17839 + chr3L_5_14835001 chr3L_14835001 RC1_1-HE 1654 chr3L 14851393 14851419 chr3L 14851476 14851501 7 83 7.5 6.0 6.8 0.9 108 chr3L 14851393 intron CG17839 + chr3L 14851447 intron CG17839 + chr3L 14851501 intron CG17839 + chr3L_7_14850001 chr3L_14850001 RC1_1-HE 1655 chr3L 14854792 14854815 chr3L 14854902 14854922 10 107 3.5 3.0 3.2 2.4 130 chr3L 14854792 intron CG17839 + chr3L 14854857 intron CG17839 + chr3L 14854922 intron CG17839 + chr3L_10_14850001 chr3L_14850001 RC1_1-HE 1656 chr3L 14875529 14875560 chr3L 14875606 14875637 14 77 7.5 4.0 5.8 2.1 108 chr3L 14875529 intron CG17839 + chr3L 14875583 intron CG17839 + chr3L 14875637 intron CG17839 + chr3L_14_14875001 chr3L_14875001 RC1_1-HE 1657 chr3L 14912186 14912213 chr3L 14912269 14912296 14 83 5.5 8.0 6.8 1.8 110 chr3L 14912186 intron DCX-EMAP + chr3L 14912241 intron DCX-EMAP + chr3L 14912296 intron DCX-EMAP + chr3L_14_14910001 chr3L_14910001 RC1_1-HE 1658 chr3L 14945245 14945248 chr3L 14945534 14945537 4 289 5.0 0.0 2.5 1.1 292 chr3L 14945245 intergenic BobA - chr3L 14945391 intergenic BobA - chr3L 14945537 3` UTR BobA - chr3L_4_14945001 chr3L_14945001 RC1_1-HE 1659 chr3L 14948411 14948434 chr3L 14948506 14948523 9 94 3.0 0.0 1.5 3.6 112 chr3L 14948411 intergenic not near genes chr3L 14948467 intergenic not near genes chr3L 14948523 intergenic not near genes chr3L_9_14945001 chr3L_14945001 RC1_1-HE 1660 chr3L 14959952 14959971 chr3L 14960034 14960053 10 82 5.0 6.5 5.8 1.5 101 chr3L 14959952 intergenic not near genes chr3L 14960002 intergenic not near genes chr3L 14960053 intergenic not near genes chr3L_10_14960001 chr3L_14960001 RC1_1-HE 1661 chr3L 15046069 15046108 chr3L 15046150 15046189 16 81 4.0 4.5 4.2 3.1 120 chr3L 15046069 intron Sytbeta - chr3L 15046129 intron Sytbeta - chr3L 15046189 intron Sytbeta - chr3L_16_15045001 chr3L_15045001 RC1_1-HE 1662 chr3L 15050932 15050969 chr3L 15051033 15051070 14 100 4.0 7.0 5.5 2.2 138 chr3L 15050932 intron,3` UTR Sytbeta -,CG43679 - chr3L 15051001 intron,3` UTR Sytbeta -,CG43679 - chr3L 15051070 intron,exon Sytbeta -,CG43679 - chr3L_14_15050001 chr3L_15050001 RC1_1-HE 1663 chr3L 15053420 15053448 chr3L 15053760 15053788 10 340 4.0 4.0 4.0 2.0 368 chr3L 15053420 intron Sytbeta - chr3L 15053604 intron,3` UTR Sytbeta -,CG18649 - chr3L 15053788 intron,3` UTR Sytbeta -,CG18649 - chr3L_10_15050001 chr3L_15050001 RC1_1-HE 1664 chr3L 15062168 15062185 chr3L 15062263 15062280 9 95 9.0 7.5 8.2 1.0 112 chr3L 15062168 intron Sytbeta - chr3L 15062224 intron,3` UTR Sytbeta -,CR43684 - chr3L 15062280 intron,3` UTR Sytbeta -,CR43684 - chr3L_9_15060001 chr3L_15060001 RC1_1-HE 1665 chr3L 15085047 15085082 chr3L 15086214 15086248 1360 10 1165 3.0 0.5 1.8 3.6 1201 chr3L 15085047 intron cp309 - chr3L 15085648 intron cp309 - chr3L 15086248 intron cp309 - chr3L_10_15085001 chr3L_15085001 RC1_1-HE 1666 chr3L 15164016 15164054 chr3L 15164243 15164271 12 226 3.5 2.0 2.8 3.2 255 chr3L 15164016 intergenic CG7011 - chr3L 15164144 intergenic not near genes chr3L 15164271 intergenic not near genes chr3L_12_15160001 chr3L_15160001 RC1_1-HE 1667 chr3L 15164860 15164881 chr3L 15164945 15164955 10 84 3.5 5.5 4.5 1.8 95 chr3L 15164860 intergenic not near genes chr3L 15164908 intergenic not near genes chr3L 15164955 intergenic not near genes chr3L_10_15160001 chr3L_15160001 RC1_1-HE 1668 chr3L 15184633 15184663 chr3L 15187021 15187051 22 2388 9.5 30.5 20.0 1.0 2418 chr3L 15184633 intergenic not near genes chr3L 15185842 intergenic not near genes chr3L 15187051 intergenic not near genes chr3L_22_15185001 chr3L_15185001 RC1_1-HE 1669 chr3L 15183315 15183334 chr3L 15187789 15187808 13 4474 29.0 45.5 37.2 0.3 4493 chr3L 15183315 intergenic not near genes chr3L 15185562 intergenic not near genes chr3L 15187808 intergenic not near genes chr3L_13_15185001 chr3L_15185001 RC1_1-HE 1670 chr3L 15209071 15209097 chr3L 15209158 15209183 19 86 0.0 0.0 0.0 19.0 112 chr3L 15209071 intergenic CG6888 + chr3L 15209127 intergenic not near genes chr3L 15209183 intergenic not near genes chr3L_19_15205001 chr3L_15205001 RC1_1-HE 1671 chr3L 15233552 15233574 chr3L 15233634 15233656 11 82 4.0 6.0 5.0 1.8 104 chr3L 15233552 intergenic not near genes chr3L 15233604 intergenic not near genes chr3L 15233656 intergenic not near genes chr3L_11_15230001 chr3L_15230001 RC1_1-HE 1672 chr3L 15244650 15244682 chr3L 15244736 15244768 12 86 4.0 5.0 4.5 2.2 118 chr3L 15244650 intergenic not near genes chr3L 15244709 intergenic not near genes chr3L 15244768 intergenic not near genes chr3L_12_15240001 chr3L_15240001 RC1_1-HE 1673 chr3L 15262636 15262664 chr3L 15262721 15262749 8 85 3.5 4.5 4.0 1.6 113 chr3L 15262636 intergenic not near genes chr3L 15262692 intergenic not near genes chr3L 15262749 intergenic not near genes chr3L_8_15260001 chr3L_15260001 RC1_1-HE 1674 chr3L 15295768 15295799 chr3L 15298612 15298643 gypsy5 14 2844 5.0 4.0 4.5 2.5 2875 chr3L 15295768 intergenic not near genes chr3L 15297206 intergenic not near genes chr3L 15298643 intergenic Best4 + chr3L_14_15295001 chr3L_15295001 RC1_1-HE 1675 chr3L 15423761 15423777 chr3L 15426606 15426622 opus 10 2845 5.5 5.5 5.5 1.5 2861 chr3L 15423761 intergenic not near genes chr3L 15425192 intergenic not near genes chr3L 15426622 intergenic not near genes chr3L_10_15425001 chr3L_15425001 RC1_1-HE 1676 chr3L 15430620 15430649 chr3L 15430697 15430726 10 76 2.5 2.0 2.2 3.1 106 chr3L 15430620 intergenic not near genes chr3L 15430673 intergenic not near genes chr3L 15430726 intergenic not near genes chr3L_10_15430001 chr3L_15430001 RC1_1-HE 1677 chr3L 15438315 15438341 chr3L 15438390 15438420 5 78 2.5 6.0 4.2 1.0 105 chr3L 15438315 intergenic not near genes chr3L 15438368 intergenic not near genes chr3L 15438420 intergenic not near genes chr3L_5_15435001 chr3L_15435001 RC1_1-HE 1678 chr3L 15466036 15466134 chr3L 15466119 15466231 12 89 0.0 0.5 0.2 10.0 195 chr3L 15466036 intergenic not near genes chr3L 15466134 intergenic not near genes chr3L 15466231 intergenic not near genes chr3L_12_15465001 chr3L_15465001 RC1_1-HE 1679 chr3L 15525373 15525408 chr3L 15525455 15525489 25 81 6.0 6.5 6.2 3.5 116 chr3L 15525373 intergenic CG33986 - chr3L 15525431 intergenic CG33986 -,CG33985 - chr3L 15525489 intergenic CG33986 -,CG33985 - chr3L_25_15525001 chr3L_15525001 RC1_1-HE 1680 chr3L 15541618 15541651 chr3L 15541710 15541743 10 92 6.5 2.5 4.5 1.8 125 chr3L 15541618 intron CrebA + chr3L 15541680 intron CrebA + chr3L 15541743 intron CrebA + chr3L_10_15540001 chr3L_15540001 RC1_1-HE 1681 chr3L 15554921 15554952 chr3L 15556709 15556740 S-element 11 1788 2.5 3.0 2.8 2.9 1819 chr3L 15554921 intron AGO2 + chr3L 15555830 intron AGO2 + chr3L 15556740 intron AGO2 + chr3L_11_15555001 chr3L_15555001 RC1_1-HE 1682 chr3L 15633187 15633216 chr3L 15633268 15633297 8 81 2.0 1.0 1.5 3.2 110 chr3L 15633187 intron comm3 - chr3L 15633242 intron comm3 - chr3L 15633297 intron comm3 - chr3L_8_15630001 chr3L_15630001 RC1_1-HE 1683 chr3L 15651178 15651201 chr3L 15651262 15651271 6 82 2.0 4.5 3.2 1.4 93 chr3L 15651178 exon CG43084 + chr3L 15651224 exon CG43084 + chr3L 15651271 exon CG43084 + chr3L_6_15650001 chr3L_15650001 RC1_1-HE 1684 chr3L 15695977 15696010 chr3L 15696056 15696089 19 79 2.5 6.5 4.5 3.5 112 chr3L 15695977 intergenic not near genes chr3L 15696033 intergenic not near genes chr3L 15696089 intergenic not near genes chr3L_19_15695001 chr3L_15695001 RC1_1-HE 1685 chr3L 15698993 15699026 chr3L 15699093 15699126 17 100 5.0 3.5 4.2 3.3 133 chr3L 15698993 intron comm2 - chr3L 15699060 intron comm2 - chr3L 15699126 intron comm2 - chr3L_17_15695001 chr3L_15695001 RC1_1-HE 1686 chr3L 15737378 15737403 chr3L 15737469 15737494 12 91 4.5 4.0 4.2 2.3 116 chr3L 15737378 intergenic not near genes chr3L 15737436 intergenic not near genes chr3L 15737494 intergenic not near genes chr3L_12_15735001 chr3L_15735001 RC1_1-HE 1687 chr3L 15756867 15756913 chr3L 15756961 15756997 10 92 0.0 0.0 0.0 10.0 130 chr3L 15756867 intergenic not near genes chr3L 15756932 intergenic not near genes chr3L 15756997 intergenic not near genes chr3L_10_15755001 chr3L_15755001 RC1_1-HE 1688 chr3L 15758971 15759008 chr3L 15759734 15759772 14 762 6.0 6.0 6.0 2.0 801 chr3L 15758971 intergenic not near genes chr3L 15759372 intergenic not near genes chr3L 15759772 intergenic not near genes chr3L_14_15755001 chr3L_15755001 RC1_1-HE 1689 chr3L 15782568 15782583 chr3L 15782671 15782686 5 103 1.5 3.0 2.2 1.6 118 chr3L 15782568 intergenic not near genes chr3L 15782627 intergenic not near genes chr3L 15782686 intergenic not near genes chr3L_5_15780001 chr3L_15780001 RC1_1-HE 1690 chr3L 15881618 15881653 chr3L 15881923 15881958 12 305 2.0 3.0 2.5 3.4 340 chr3L 15881618 intron pHCl - chr3L 15881788 intron pHCl - chr3L 15881958 intron pHCl - chr3L_12_15880001 chr3L_15880001 RC1_1-HE 1691 chr3L 15899224 15899262 chr3L 15899791 15899823 jockey 5 566 0.5 6.5 3.5 1.1 599 chr3L 15899224 intergenic pHCl - chr3L 15899524 intergenic pHCl - chr3L 15899823 intergenic sff - chr3L_5_15895001 chr3L_15895001 RC1_1-HE 1692 chr3L 15910114 15910149 chr3L 15910200 15910235 24 86 7.0 6.0 6.5 3.2 121 chr3L 15910114 intron sff - chr3L 15910174 intron sff - chr3L 15910235 intron sff - chr3L_24_15910001 chr3L_15910001 RC1_1-HE 1693 chr3L 15916536 15916569 chr3L 15916614 15916647 4 78 0.0 5.0 2.5 1.1 111 chr3L 15916536 intron sff - chr3L 15916592 intron sff - chr3L 15916647 intron sff - chr3L_4_15915001 chr3L_15915001 RC1_1-HE 1694 chr3L 15946586 15946616 chr3L 15946663 15946693 10 77 1.5 5.0 3.2 2.4 107 chr3L 15946586 intron Pka-C3 - chr3L 15946640 intron Pka-C3 - chr3L 15946693 intron Pka-C3 - chr3L_10_15945001 chr3L_15945001 RC1_1-HE 1695 chr3L 16058081 16058114 chr3L 16058220 16058253 30 139 6.5 6.5 6.5 4.0 172 chr3L 16058081 intron Mbs + chr3L 16058167 intron Mbs + chr3L 16058253 intron Mbs + chr3L_30_16055001 chr3L_16055001 RC1_1-HE 1696 chr3L 16145355 16145368 chr3L 16145439 16145452 5 84 13.5 6.5 10.0 0.5 97 chr3L 16145355 intron CG5151 - chr3L 16145404 intron CG5151 - chr3L 16145452 intron CG5151 - chr3L_5_16145001 chr3L_16145001 RC1_1-HE 1697 chr3L 16158807 16158834 chr3L 16158893 16158920 5 86 0.0 1.0 0.5 3.3 113 chr3L 16158807 intron CG5151 - chr3L 16158864 intron CG5151 - chr3L 16158920 intron CG5151 - chr3L_5_16155001 chr3L_16155001 RC1_1-HE 1698 chr3L 16165063 16165086 chr3L 16165220 16165250 9 163 5.0 1.5 3.2 2.1 187 chr3L 16165063 intergenic CG5151 - chr3L 16165156 intergenic CG5151 - chr3L 16165250 intergenic not near genes chr3L_9_16165001 chr3L_16165001 RC1_1-HE 1699 chr3L 16170257 16170272 chr3L 16170340 16170355 4 83 0.5 0.5 0.5 2.7 98 chr3L 16170257 intergenic CG33796 -,CG33795 - chr3L 16170306 intergenic CG33796 -,CG33795 - chr3L 16170355 intergenic CG33796 -,CG33795 - chr3L_4_16170001 chr3L_16170001 RC1_1-HE 1700 chr3L 16184101 16184131 chr3L 16188921 16188951 X-element 13 4820 4.5 4.5 4.5 2.4 4850 chr3L 16184101 intergenic not near genes chr3L 16186526 intergenic not near genes chr3L 16188951 intergenic not near genes chr3L_13_16185001 chr3L_16185001 RC1_1-HE 1701 chr3L 16212810 16212844 chr3L 16212902 16212936 14 92 2.5 2.5 2.5 4.0 126 chr3L 16212810 intergenic CG13073 - chr3L 16212873 intergenic CG13073 - chr3L 16212936 intergenic CG13073 - chr3L_14_16210001 chr3L_16210001 RC1_1-HE 1702 chr3L 16220501 16220509 chr3L 16220587 16220595 4 86 2.0 1.0 1.5 1.6 94 chr3L 16220501 intergenic not near genes chr3L 16220548 intergenic not near genes chr3L 16220595 intergenic not near genes chr3L_4_16220001 chr3L_16220001 RC1_1-HE 1703 chr3L 16236355 16236370 chr3L 16236471 16236486 7 116 0.0 5.5 2.8 1.8 131 chr3L 16236355 3` UTR l(3)72Dp + chr3L 16236420 3` UTR l(3)72Dp + chr3L 16236486 3` UTR l(3)72Dp + chr3L_7_16235001 chr3L_16235001 RC1_1-HE 1704 chr3L 16241893 16241925 chr3L 16241978 16242010 11 85 6.0 3.5 4.8 1.9 117 chr3L 16241893 intergenic not near genes chr3L 16241952 intergenic not near genes chr3L 16242010 intergenic not near genes chr3L_11_16240001 chr3L_16240001 RC1_1-HE 1705 chr3L 16244574 16244604 chr3L 16244652 16244682 4 78 2.0 0.0 1.0 2.0 108 chr3L 16244574 intergenic not near genes chr3L 16244628 intergenic not near genes chr3L 16244682 intergenic not near genes chr3L_4_16240001 chr3L_16240001 RC1_1-HE 1706 chr3L 16436614 16436624 chr3L 16436692 16436702 10 78 10.5 12.0 11.2 0.8 88 chr3L 16436614 intron,intron CG33158 +,dsx-c73A - chr3L 16436658 intron,intron CG33158 +,dsx-c73A - chr3L 16436702 intron,intron CG33158 +,dsx-c73A - chr3L_10_16435001 chr3L_16435001 RC1_1-HE 1707 chr3L 16443850 16443878 chr3L 16446191 16446219 Doc 21 2341 7.5 13.0 10.2 1.9 2369 chr3L 16443850 intron,intron CG33158 +,dsx-c73A - chr3L 16445034 intron,intron CG33158 +,dsx-c73A - chr3L 16446219 intron,intron CG33158 +,dsx-c73A - chr3L_21_16445001 chr3L_16445001 RC1_1-HE 1708 chr3L 16450018 16450053 chr3L 16450104 16450139 11 86 1.5 4.5 3.0 2.8 121 chr3L 16450018 intron,intron CG33158 +,dsx-c73A - chr3L 16450078 intron,intron CG33158 +,dsx-c73A - chr3L 16450139 intron,intron CG33158 +,dsx-c73A - chr3L_11_16450001 chr3L_16450001 RC1_1-HE 1709 chr3L 16457529 16457545 chr3L 16457625 16457641 7 96 1.0 8.0 4.5 1.3 112 chr3L 16457529 intron CG33158 + chr3L 16457585 intron CG33158 + chr3L 16457641 intron CG33158 + chr3L_7_16455001 chr3L_16455001 RC1_1-HE 1710 chr3L 16458762 16458768 chr3L 16458841 16458847 4 79 14.0 13.0 13.5 0.3 85 chr3L 16458762 intron CG33158 + chr3L 16458804 intron CG33158 + chr3L 16458847 intron CG33158 + chr3L_4_16455001 chr3L_16455001 RC1_1-HE 1711 chr3L 16493973 16494012 chr3L 16494491 16494529 jockey 27 518 6.5 11.0 8.8 2.8 556 chr3L 16493973 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494251 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494529 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_27_16490001 chr3L_16490001 RC1_1-HE 1712 chr3L 16515008 16515043 chr3L 16515087 16515122 21 79 3.5 4.5 4.0 4.2 114 chr3L 16515008 intron CG43373 - chr3L 16515065 intron CG43373 - chr3L 16515122 intron CG43373 - chr3L_21_16515001 chr3L_16515001 RC1_1-HE 1713 chr3L 16544273 16544304 chr3L 16544369 16544400 15 94 3.5 4.0 3.8 3.1 127 chr3L 16544273 intergenic CG13033 - chr3L 16544336 intergenic CG13033 - chr3L 16544400 intergenic CG13033 - chr3L_15_16540001 chr3L_16540001 RC1_1-HE 1714 chr3L 16560328 16560332 chr3L 16560395 16560418 4 77 5.5 3.0 4.2 0.8 90 chr3L 16560328 intergenic not near genes chr3L 16560373 intergenic not near genes chr3L 16560418 intergenic not near genes chr3L_4_16560001 chr3L_16560001 RC1_1-HE 1715 chr3L 16574124 16574132 chr3L 16574234 16574242 5 110 4.0 6.0 5.0 0.8 118 chr3L 16574124 intergenic not near genes chr3L 16574183 intergenic mbf1 + chr3L 16574242 intergenic mbf1 + chr3L_5_16570001 chr3L_16570001 RC1_1-HE 1716 chr3L 11801798 11801802 chr3L 16590062 16590066 6 4788264 18.5 19.0 18.8 0.3 4788268 chr3L 11801798 intergenic CG42255 - chr3L 14195932 intron nuf + chr3L 16590066 3` UTR,3` UTR l(3)73Ah +,tra - chr3L_6_14195001 chr3L_14195001 RC1_1-HE 1717 chr3L 16664241 16664263 chr3L 16664366 16664388 8 125 2.0 3.0 2.5 2.3 147 chr3L 16664241 intron Galphaf - chr3L 16664314 intron Galphaf - chr3L 16664388 intron Galphaf - chr3L_8_16660001 chr3L_16660001 RC1_1-HE 1718 chr3L 16684022 16684052 chr3L 16689244 16689257 copia 5 5219 2.5 1.0 1.8 1.8 5235 chr3L 16684022 intron,intron Lasp -,CG43954 - chr3L 16686640 intron,intron Lasp -,CG43954 - chr3L 16689257 intron,intron Lasp -,CG43954 - chr3L_5_16685001 chr3L_16685001 RC1_1-HE 1719 chr3L 16735317 16735345 chr3L 16735433 16735461 9 116 3.5 4.0 3.8 1.9 144 chr3L 16735317 intron CG9701 + chr3L 16735389 intron CG9701 + chr3L 16735461 intron CG9701 + chr3L_9_16735001 chr3L_16735001 RC1_1-HE 1720 chr3L 16806825 16806836 chr3L 16806930 16806941 6 105 5.5 2.5 4.0 1.2 116 chr3L 16806825 intron,intron CG9674 -,nudC + chr3L 16806883 intron,intron CG9674 -,nudC + chr3L 16806941 intron,intron CG9674 -,nudC + chr3L_6_16805001 chr3L_16805001 RC1_1-HE 1721 chr3L 16806837 16806856 chr3L 16806929 16806961 5 102 3.0 2.5 2.8 1.3 124 chr3L 16806837 intron,intron CG9674 -,nudC + chr3L 16806899 intron,intron CG9674 -,nudC + chr3L 16806961 intron,intron CG9674 -,nudC + chr3L_5_16805001 chr3L_16805001 RC1_1-HE 1722 chr3L 16809040 16809049 chr3L 16809127 16809136 5 87 0.0 3.5 1.8 1.8 96 chr3L 16809040 intron nudC + chr3L 16809088 intron nudC + chr3L 16809136 intron nudC + chr3L_5_16805001 chr3L_16805001 RC1_1-HE 1723 chr3L 16840578 16840604 chr3L 16840686 16840712 21 107 1.0 8.0 4.5 3.8 134 chr3L 16840578 intergenic not near genes chr3L 16840645 intergenic not near genes chr3L 16840712 intergenic not near genes chr3L_21_16840001 chr3L_16840001 RC1_1-HE 1724 chr3L 16845026 16845043 chr3L 16845140 16845152 8 113 4.5 8.5 6.5 1.1 126 chr3L 16845026 intergenic CG9669 -,CG9715 +,TSG101 + chr3L 16845089 intergenic CG9669 -,CG9715 + chr3L 16845152 intergenic CG9669 -,CG9715 + chr3L_8_16845001 chr3L_16845001 RC1_1-HE 1725 chr3L 16869573 16869605 chr3L 16869657 16869689 11 84 1.0 3.5 2.2 3.4 116 chr3L 16869573 intron Lmpt + chr3L 16869631 intron Lmpt + chr3L 16869689 intron Lmpt + chr3L_11_16865001 chr3L_16865001 RC1_1-HE 1726 chr3L 16873340 16873363 chr3L 16873446 16873469 6 106 6.0 1.0 3.5 1.3 129 chr3L 16873340 intron Lmpt + chr3L 16873404 intron Lmpt + chr3L 16873469 intron Lmpt + chr3L_6_16870001 chr3L_16870001 RC1_1-HE 1727 chr3L 16941400 16941434 chr3L 16941502 16941536 4 102 4.0 0.0 2.0 1.3 136 chr3L 16941400 intron Cpr73D - chr3L 16941468 intron Cpr73D - chr3L 16941536 intron Cpr73D - chr3L_4_16940001 chr3L_16940001 RC1_1-HE 1728 chr3L 16945725 16945760 chr3L 16954879 16954914 roo 41 9152 10.0 4.0 7.0 5.1 9189 chr3L 16945725 exon Obp73a + chr3L 16950320 intergenic not near genes chr3L 16954914 5` UTR Nc73EF + chr3L_41_16950001 chr3L_16950001 RC1_1-HE 1729 chr3L 17034936 17034971 chr3L 17035125 17035146 G2 8 187 2.5 2.5 2.5 2.3 210 chr3L 17034936 intergenic not near genes chr3L 17035041 intergenic not near genes chr3L 17035146 intergenic not near genes chr3L_8_17035001 chr3L_17035001 RC1_1-HE 1730 chr3L 17085001 17085035 chr3L 17094151 17094185 roo 19 9149 7.5 8.0 7.8 2.2 9184 chr3L 17085001 intron Rbp6 - chr3L 17089593 intron Rbp6 - chr3L 17094185 intron Rbp6 - chr3L_19_17085001 chr3L_17085001 RC1_1-HE 1731 chr3L 17113870 17113903 chr3L 17113956 17113989 17 86 4.5 6.0 5.2 2.7 119 chr3L 17113870 intron Rbp6 - chr3L 17113930 intron Rbp6 - chr3L 17113989 intron Rbp6 - chr3L_17_17110001 chr3L_17110001 RC1_1-HE 1732 chr3L 17120657 17120685 chr3L 17120734 17120762 8 77 4.0 4.5 4.2 1.5 105 chr3L 17120657 intron Rbp6 - chr3L 17120710 intron Rbp6 - chr3L 17120762 intron Rbp6 - chr3L_8_17120001 chr3L_17120001 RC1_1-HE 1733 chr3L 17146952 17146986 chr3L 17147035 17147069 9 83 2.0 4.5 3.2 2.1 117 chr3L 17146952 intron Rbp6 - chr3L 17147010 intron Rbp6 - chr3L 17147069 intron Rbp6 - chr3L_9_17145001 chr3L_17145001 RC1_1-HE 1734 chr3L 17149163 17149195 chr3L 17149245 17149251 13 80 5.5 0.5 3.0 3.2 88 chr3L 17149163 intron Rbp6 - chr3L 17149207 intron Rbp6 - chr3L 17149251 intron Rbp6 - chr3L_13_17145001 chr3L_17145001 RC1_1-HE 1735 chr3L 17194418 17194444 chr3L 17194505 17194531 11 87 5.5 5.5 5.5 1.7 113 chr3L 17194418 intron Rbp6 - chr3L 17194474 intron Rbp6 - chr3L 17194531 intron Rbp6 - chr3L_11_17190001 chr3L_17190001 RC1_1-HE 1736 chr3L 17331062 17331072 chr3L 17331152 17331163 5 91 1.5 1.0 1.2 2.3 101 chr3L 17331062 intergenic not near genes chr3L 17331112 intergenic not near genes chr3L 17331163 intergenic not near genes chr3L_5_17330001 chr3L_17330001 RC1_1-HE 1737 chr3L 17367433 17367453 chr3L 17367528 17367548 5 95 1.0 1.0 1.0 2.5 115 chr3L 17367433 intergenic CR45688 +,Cad74A - chr3L 17367490 intergenic CR45688 +,Cad74A - chr3L 17367548 intergenic CR45688 +,Cad74A - chr3L_5_17365001 chr3L_17365001 RC1_1-HE 1738 chr3L 17408913 17408924 chr3L 17408990 17409001 4 77 6.5 1.5 4.0 0.8 88 chr3L 17408913 intron blot - chr3L 17408957 intron blot - chr3L 17409001 intron blot - chr3L_4_17405001 chr3L_17405001 RC1_1-HE 1739 chr3L 17415879 17415916 chr3L 17415959 17415996 14 79 3.0 3.5 3.2 3.3 117 chr3L 17415879 intron blot - chr3L 17415938 intron blot - chr3L 17415996 intron blot - chr3L_14_17415001 chr3L_17415001 RC1_1-HE 1740 chr3L 17421614 17421632 chr3L 17421725 17421743 13 111 0.0 7.0 3.5 2.9 129 chr3L 17421614 intergenic blot -,Sec3 - chr3L 17421678 intergenic Sec3 -,blot - chr3L 17421743 intergenic Sec3 -,blot - chr3L_13_17420001 chr3L_17420001 RC1_1-HE 1741 chr3L 17443072 17443099 chr3L 17443162 17443189 17 90 9.5 5.0 7.2 2.1 117 chr3L 17443072 intron CG18265 + chr3L 17443130 intron CG18265 + chr3L 17443189 intron CG18265 + chr3L_17_17440001 chr3L_17440001 RC1_1-HE 1742 chr3L 17483554 17483669 chr3L 17483643 17483765 10 95 6.5 16.5 11.5 0.8 211 chr3L 17483554 intron CG6333 - chr3L 17483660 intron CG6333 - chr3L 17483765 intron CG6333 - chr3L_10_17480001 chr3L_17480001 RC1_1-HE 1743 chr3L 17510731 17510765 chr3L 17510816 17510849 12 85 3.0 4.5 3.8 2.5 118 chr3L 17510731 exon Oatp74D + chr3L 17510790 intron Oatp74D + chr3L 17510849 intron Oatp74D + chr3L_12_17510001 chr3L_17510001 RC1_1-HE 1744 chr3L 17516983 17517011 chr3L 17524542 17524570 412 11 7559 4.0 6.0 5.0 1.8 7587 chr3L 17516983 intron CG7564 + chr3L 17520776 intron CG7564 + chr3L 17524570 3` UTR CG7564 + chr3L_11_17520001 chr3L_17520001 RC1_1-HE 1745 chr3L 17547894 17547929 chr3L 17547994 17548029 13 100 3.0 2.0 2.5 3.7 135 chr3L 17547894 intron Jon74E - chr3L 17547962 intron Jon74E - chr3L 17548029 intron Jon74E - chr3L_13_17545001 chr3L_17545001 RC1_1-HE 1746 chr3L 17570884 17570912 chr3L 17570963 17570996 8 83 2.5 2.5 2.5 2.3 112 chr3L 17570884 intron Eip74EF - chr3L 17570940 intron Eip74EF - chr3L 17570996 intron Eip74EF - chr3L_8_17570001 chr3L_17570001 RC1_1-HE 1747 chr3L 17636108 17636128 chr3L 17636257 17636277 7 149 4.5 5.5 5.0 1.2 169 chr3L 17636108 intron CG7497 + chr3L 17636192 intron CG7497 + chr3L 17636277 intron CG7497 + chr3L_7_17635001 chr3L_17635001 RC1_1-HE 1748 chr3L 17664829 17664862 chr3L 17664914 17664947 14 85 3.0 5.0 4.0 2.8 118 chr3L 17664829 intron Crtc - chr3L 17664888 intron Crtc - chr3L 17664947 intron Crtc - chr3L_14_17660001 chr3L_17660001 RC1_1-HE 1749 chr3L 17666878 17666904 chr3L 17666963 17666989 13 85 1.5 4.5 3.0 3.2 111 chr3L 17666878 intron Crtc - chr3L 17666934 intron Crtc - chr3L 17666989 intron Crtc - chr3L_13_17665001 chr3L_17665001 RC1_1-HE 1750 chr3L 17691976 17691995 chr3L 17692061 17692080 8 85 4.0 0.0 2.0 2.7 104 chr3L 17691976 intron Ccn + chr3L 17692028 intron Ccn + chr3L 17692080 intron Ccn + chr3L_8_17690001 chr3L_17690001 RC1_1-HE 1751 chr3L 17730742 17730777 chr3L 17738231 17738266 mdg1 11 7488 3.5 2.0 2.8 2.9 7524 chr3L 17730742 intron Ccn + chr3L 17734504 intron Ccn + chr3L 17738266 intron Ccn + chr3L_11_17730001 chr3L_17730001 RC1_1-HE 1752 chr3L 17744004 17744023 chr3L 17745774 17745793 8 1770 22.5 24.0 23.2 0.3 1789 chr3L 17744004 intron Ccn + chr3L 17744898 intron Ccn + chr3L 17745793 intron,exon Ccn +,CG6034 - chr3L_8_17740001 chr3L_17740001 RC1_1-HE 1753 chr3L 17743930 17743945 chr3L 17746206 17746221 6 2276 21.0 30.5 25.8 0.2 2291 chr3L 17743930 intron Ccn + chr3L 17745076 intron Ccn + chr3L 17746221 intron,exon Ccn +,CG6034 - chr3L_6_17745001 chr3L_17745001 RC1_1-HE 1754 chr3L 17765101 17765132 chr3L 17765180 17765211 14 79 5.5 3.0 4.2 2.7 110 chr3L 17765101 intergenic not near genes chr3L 17765156 intergenic not near genes chr3L 17765211 intergenic not near genes chr3L_14_17765001 chr3L_17765001 RC1_1-HE 1755 chr3L 17775047 17775073 chr3L 17775129 17775155 8 82 5.5 5.5 5.5 1.2 108 chr3L 17775047 intergenic not near genes chr3L 17775101 intergenic not near genes chr3L 17775155 intergenic not near genes chr3L_8_17775001 chr3L_17775001 RC1_1-HE 1756 chr3L 17790452 17790625 chr3L 17790594 17790891 18 168 0.0 0.0 0.0 18.0 439 chr3L 17790452 intergenic not near genes chr3L 17790672 intergenic CG42815 - chr3L 17790891 intergenic CG42815 - chr3L_18_17790001 chr3L_17790001 RC1_1-HE 1757 chr3L 17799809 17799837 chr3L 17801597 17801625 S-element 9 1788 2.5 2.0 2.2 2.8 1816 chr3L 17799809 intron NUCB1 - chr3L 17800717 intron NUCB1 - chr3L 17801625 intron NUCB1 - chr3L_9_17800001 chr3L_17800001 RC1_1-HE 1758 chr3L 17991579 17991588 chr3L 17991655 17991667 10 79 6.0 8.5 7.2 1.2 88 chr3L 17991579 intron Eip75B - chr3L 17991623 intron Eip75B - chr3L 17991667 intron Eip75B - chr3L_10_17990001 chr3L_17990001 RC1_1-HE 1759 chr3L 18000671 18000708 chr3L 18000749 18000786 25 78 3.0 3.0 3.0 6.2 115 chr3L 18000671 intron Eip75B - chr3L 18000728 intron Eip75B - chr3L 18000786 intron Eip75B - chr3L_25_18000001 chr3L_18000001 RC1_1-HE 1760 chr3L 18013978 18013984 chr3L 18014068 18014074 4 90 4.5 0.0 2.2 1.2 96 chr3L 18013978 intron Eip75B - chr3L 18014026 intron Eip75B - chr3L 18014074 intron Eip75B - chr3L_4_18010001 chr3L_18010001 RC1_1-HE 1761 chr3L 18020563 18020589 chr3L 18020670 18020696 12 107 2.5 3.0 2.8 3.2 133 chr3L 18020563 intron Eip75B - chr3L 18020630 intron Eip75B - chr3L 18020696 intron Eip75B - chr3L_12_18020001 chr3L_18020001 RC1_1-HE 1762 chr3L 18029956 18029982 chr3L 18030034 18030060 12 77 1.0 0.0 0.5 8.0 104 chr3L 18029956 intron Eip75B - chr3L 18030008 intron Eip75B - chr3L 18030060 intron Eip75B - chr3L_12_18030001 chr3L_18030001 RC1_1-HE 1763 chr3L 18047729 18047738 chr3L 18056787 18056796 roo 6 9058 2.0 5.0 3.5 1.3 9067 chr3L 18047729 intron Eip75B - chr3L 18052262 intron Eip75B - chr3L 18056796 intron Eip75B - chr3L_6_18050001 chr3L_18050001 RC1_1-HE 1764 chr3L 18081561 18081582 chr3L 18081737 18081758 10 175 5.5 9.0 7.2 1.2 197 chr3L 18081561 intron CR43253 - chr3L 18081660 intron CR43253 - chr3L 18081758 intron CR43253 - chr3L_10_18080001 chr3L_18080001 RC1_1-HE 1765 chr3L 18106257 18106270 chr3L 18106377 18106390 5 120 2.5 0.0 1.2 2.3 133 chr3L 18106257 intergenic CG13698 -,mRpS26 + chr3L 18106324 intergenic CG13698 -,mRpS26 + chr3L 18106390 intergenic mRpS26 +,CG13698 - chr3L_5_18105001 chr3L_18105001 RC1_1-HE 1766 chr3L 18107620 18107644 chr3L 18107714 18107738 8 94 2.5 4.5 3.5 1.8 118 chr3L 18107620 intergenic mRpS26 +,CG5147 - chr3L 18107679 intergenic CG5147 -,mRpS26 + chr3L 18107738 intergenic CG5147 -,mRpS26 + chr3L_8_18105001 chr3L_18105001 RC1_1-HE 1767 chr3L 18138610 18138621 chr3L 18138695 18138706 5 85 2.5 2.0 2.2 1.6 96 chr3L 18138610 intergenic not near genes chr3L 18138658 intergenic not near genes chr3L 18138706 intergenic not near genes chr3L_5_18135001 chr3L_18135001 RC1_1-HE 1768 chr3L 18164231 18164241 chr3L 18164399 18164409 4 168 0.0 0.0 0.0 4.0 178 chr3L 18164231 intergenic not near genes chr3L 18164320 intergenic not near genes chr3L 18164409 intergenic not near genes chr3L_4_18160001 chr3L_18160001 RC1_1-HE 1769 chr3L 18223166 18223184 chr3L 18223250 18223268 14 83 8.5 0.0 4.2 2.7 102 chr3L 18223166 intergenic not near genes chr3L 18223217 intergenic not near genes chr3L 18223268 intergenic not near genes chr3L_14_18220001 chr3L_18220001 RC1_1-HE 1770 chr3L 18258868 18258880 chr3L 18258986 18259007 8 126 3.5 5.0 4.2 1.5 139 chr3L 18258868 intergenic not near genes chr3L 18258938 intergenic not near genes chr3L 18259007 intergenic not near genes chr3L_8_18255001 chr3L_18255001 RC1_1-HE 1771 chr3L 18262472 18262489 chr3L 18262556 18262573 12 83 5.0 5.0 5.0 2.0 101 chr3L 18262472 intergenic not near genes chr3L 18262522 intergenic not near genes chr3L 18262573 intergenic not near genes chr3L_12_18260001 chr3L_18260001 RC1_1-HE 1772 chr3L 18320130 18320161 chr3L 18320370 18320401 15 240 6.0 3.5 4.8 2.6 271 chr3L 18320130 intergenic not near genes chr3L 18320266 intergenic not near genes chr3L 18320401 intergenic not near genes chr3L_15_18320001 chr3L_18320001 RC1_1-HE 1773 chr3L 18332360 18332373 chr3L 18332473 18332489 11 116 8.5 0.0 4.2 2.1 129 chr3L 18332360 intergenic not near genes chr3L 18332424 intergenic not near genes chr3L 18332489 intergenic not near genes chr3L_11_18330001 chr3L_18330001 RC1_1-HE 1774 chr3L 18356392 18356429 chr3L 18356506 18356543 18 113 5.0 7.0 6.0 2.6 151 chr3L 18356392 intergenic not near genes chr3L 18356468 intergenic not near genes chr3L 18356543 intergenic not near genes chr3L_18_18355001 chr3L_18355001 RC1_1-HE 1775 chr3L 18408736 18408760 chr3L 18408823 18408847 14 87 3.5 5.0 4.2 2.7 111 chr3L 18408736 intergenic not near genes chr3L 18408792 intergenic not near genes chr3L 18408847 intergenic not near genes chr3L_14_18405001 chr3L_18405001 RC1_1-HE 1776 chr3L 18429465 18429480 chr3L 18429559 18429574 5 94 5.0 9.0 7.0 0.6 109 chr3L 18429465 intergenic not near genes chr3L 18429520 intergenic not near genes chr3L 18429574 intergenic not near genes chr3L_5_18425001 chr3L_18425001 RC1_1-HE 1777 chr3L 18436060 18436094 chr3L 18436159 18436193 11 98 3.5 4.0 3.8 2.3 133 chr3L 18436060 intergenic not near genes chr3L 18436126 intergenic not near genes chr3L 18436193 intergenic not near genes chr3L_11_18435001 chr3L_18435001 RC1_1-HE 1778 chr3L 18445248 18445274 chr3L 18445327 18445353 7 79 1.5 2.0 1.8 2.5 105 chr3L 18445248 intergenic not near genes chr3L 18445300 intergenic not near genes chr3L 18445353 intergenic not near genes chr3L_7_18445001 chr3L_18445001 RC1_1-HE 1779 chr3L 18456272 18456303 chr3L 18456361 18456392 13 89 3.5 2.0 2.8 3.4 120 chr3L 18456272 intergenic CR44670 - chr3L 18456332 intergenic CR44670 - chr3L 18456392 intergenic CR44670 - chr3L_13_18455001 chr3L_18455001 RC1_1-HE 1780 chr3L 18506133 18506161 chr3L 18509597 18509625 F-element 19 3464 6.0 5.5 5.8 2.8 3492 chr3L 18506133 intergenic not near genes chr3L 18507879 intergenic not near genes chr3L 18509625 intergenic not near genes chr3L_19_18505001 chr3L_18505001 RC1_1-HE 1781 chr3L 18514903 18514937 chr3L 18520095 18520129 BS 14 5192 6.0 5.0 5.5 2.2 5226 chr3L 18514903 intergenic not near genes chr3L 18517516 intergenic not near genes chr3L 18520129 intergenic not near genes chr3L_14_18515001 chr3L_18515001 RC1_1-HE 1782 chr3L 18520545 18520580 chr3L 18520627 18520662 15 82 3.5 2.0 2.8 3.9 117 chr3L 18520545 intergenic not near genes chr3L 18520604 intergenic not near genes chr3L 18520662 intergenic not near genes chr3L_15_18520001 chr3L_18520001 RC1_1-HE 1783 chr3L 18528637 18528656 chr3L 18537822 18537841 roo 13 9185 5.0 5.5 5.2 2.1 9204 chr3L 18528637 intergenic not near genes chr3L 18533239 intergenic not near genes chr3L 18537841 intergenic not near genes chr3L_13_18530001 chr3L_18530001 RC1_1-HE 1784 chr3L 18549816 18549831 chr3L 18549920 18549935 6 104 0.0 4.5 2.2 1.9 119 chr3L 18549816 intergenic not near genes chr3L 18549876 intergenic not near genes chr3L 18549935 intergenic not near genes chr3L_6_18545001 chr3L_18545001 RC1_1-HE 1785 chr3L 18555813 18555847 chr3L 18555897 18555931 6 84 2.5 2.0 2.2 1.9 118 chr3L 18555813 intergenic not near genes chr3L 18555872 intergenic not near genes chr3L 18555931 intergenic not near genes chr3L_6_18555001 chr3L_18555001 RC1_1-HE 1786 chr3L 18572910 18572942 chr3L 18573252 18573283 8 342 6.0 2.0 4.0 1.6 373 chr3L 18572910 intron AstC-R1 + chr3L 18573096 intron AstC-R1 + chr3L 18573283 intron AstC-R1 + chr3L_8_18570001 chr3L_18570001 RC1_1-HE 1787 chr3L 18593945 18593981 chr3L 18595926 18595962 Doc 8 1981 1.5 1.5 1.5 3.2 2017 chr3L 18593945 intergenic term - chr3L 18594954 intergenic not near genes chr3L 18595962 intergenic CR45389 + chr3L_8_18590001 chr3L_18590001 RC1_1-HE 1788 chr3L 18653948 18653977 chr3L 18654038 18654067 6 90 4.0 11.5 7.8 0.7 119 chr3L 18653948 intron MYPT-75D + chr3L 18654008 intron MYPT-75D + chr3L 18654067 intron MYPT-75D + chr3L_6_18650001 chr3L_18650001 RC1_1-HE 1789 chr3L 18679000 18679026 chr3L 18679116 18679142 24 116 4.5 5.0 4.8 4.1 142 chr3L 18679000 intergenic not near genes chr3L 18679071 intergenic not near genes chr3L 18679142 intergenic not near genes chr3L_24_18675001 chr3L_18675001 RC1_1-HE 1790 chr3L 18710756 18710792 chr3L 18718709 18718745 Stalker2 15 7953 3.5 4.5 4.0 3.0 7989 chr3L 18710756 intergenic not near genes chr3L 18714750 intergenic not near genes chr3L 18718745 intergenic not near genes chr3L_15_18710001 chr3L_18710001 RC1_1-HE 1791 chr3L 18726104 18726142 chr3L 18726196 18726234 12 91 4.0 2.5 3.2 2.9 130 chr3L 18726104 intergenic not near genes chr3L 18726169 intergenic not near genes chr3L 18726234 intergenic not near genes chr3L_12_18725001 chr3L_18725001 RC1_1-HE 1792 chr3L 18730374 18730383 chr3L 18730555 18730564 8 181 5.0 2.5 3.8 1.7 190 chr3L 18730374 intergenic not near genes chr3L 18730469 intergenic not near genes chr3L 18730564 intergenic not near genes chr3L_8_18730001 chr3L_18730001 RC1_1-HE 1793 chr3L 18736055 18736060 chr3L 18736151 18736156 4 96 5.5 8.0 6.8 0.5 101 chr3L 18736055 intergenic not near genes chr3L 18736106 intergenic not near genes chr3L 18736156 intergenic not near genes chr3L_4_18735001 chr3L_18735001 RC1_1-HE 1794 chr3L 18772405 18772436 chr3L 18781087 18781118 roo 4 8682 4.0 3.0 3.5 0.9 8713 chr3L 18772405 intron ftz-f1 - chr3L 18776762 intron ftz-f1 - chr3L 18781118 intron ftz-f1 - chr3L_4_18775001 chr3L_18775001 RC1_1-HE 1795 chr3L 18792581 18792604 chr3L 18792664 18792687 5 83 2.0 7.0 4.5 0.9 106 chr3L 18792581 intron ftz-f1 - chr3L 18792634 intron ftz-f1 - chr3L 18792687 intron ftz-f1 - chr3L_5_18790001 chr3L_18790001 RC1_1-HE 1796 chr3L 18810142 18810178 chr3L 18810220 18810256 24 78 4.5 6.0 5.2 3.9 114 chr3L 18810142 intron CG14073 - chr3L 18810199 intron CG14073 - chr3L 18810256 intron CG14073 - chr3L_24_18810001 chr3L_18810001 RC1_1-HE 1797 chr3L 18832612 18832647 chr3L 18832691 18832726 13 78 4.5 5.0 4.8 2.2 114 chr3L 18832612 intron Indy - chr3L 18832669 intron Indy - chr3L 18832726 intron Indy - chr3L_13_18830001 chr3L_18830001 RC1_1-HE 1798 chr3L 18833777 18833810 chr3L 18834942 18834975 1360 10 1165 1.5 4.5 3.0 2.5 1198 chr3L 18833777 intron Indy - chr3L 18834376 intron Indy - chr3L 18834975 intron Indy - chr3L_10_18830001 chr3L_18830001 RC1_1-HE 1799 chr3L 18885960 18885990 chr3L 18886338 18886348 10 375 1.0 5.0 3.0 2.5 388 chr3L 18885960 intron CG3961 - chr3L 18886154 intron CG3961 - chr3L 18886348 intron CG3961 - chr3L_10_18885001 chr3L_18885001 RC1_1-HE 1800 chr3L 18888432 18888466 chr3L 18888514 18888549 10 83 1.5 1.5 1.5 4.0 117 chr3L 18888432 intron CG3961 - chr3L 18888490 intron CG3961 - chr3L 18888549 intron CG3961 - chr3L_10_18885001 chr3L_18885001 RC1_1-HE 1801 chr3L 18933623 18933659 chr3L 18933718 18933753 13 95 2.5 5.0 3.8 2.7 130 chr3L 18933623 intron CG32204 - chr3L 18933688 intron CG32204 - chr3L 18933753 intron CG32204 - chr3L_13_18930001 chr3L_18930001 RC1_1-HE 1802 chr3L 19008830 19008873 chr3L 19009174 19009212 jockey 20 340 0.0 4.0 2.0 6.7 382 chr3L 19008830 intron nkd - chr3L 19009021 intron nkd - chr3L 19009212 intron nkd - chr3L_20_19005001 chr3L_19005001 RC1_1-HE 1803 chr3L 19015183 19015215 chr3L 19015268 19015296 5 82 0.0 9.0 4.5 0.9 113 chr3L 19015183 intron nkd - chr3L 19015240 intron nkd - chr3L 19015296 intron nkd - chr3L_5_19015001 chr3L_19015001 RC1_1-HE 1804 chr3L 19013747 19013784 chr3L 19016248 19016285 13 2504 45.5 47.0 46.2 0.3 2538 chr3L 19013747 intron nkd - chr3L 19015016 intron nkd - chr3L 19016285 intron nkd - chr3L_13_19015001 chr3L_19015001 RC1_1-HE 1805 chr3L 19082034 19082070 chr3L 19082137 19082173 20 103 3.5 3.0 3.2 4.8 139 chr3L 19082034 intron Mkp3 - chr3L 19082104 intron Mkp3 - chr3L 19082173 intron Mkp3 - chr3L_20_19080001 chr3L_19080001 RC1_1-HE 1806 chr3L 19111292 19111319 chr3L 19111376 19111403 17 84 4.5 7.0 5.8 2.5 111 chr3L 19111292 intron CG14082 - chr3L 19111348 intron CG14082 - chr3L 19111403 intron CG14082 - chr3L_17_19110001 chr3L_19110001 RC1_1-HE 1807 chr3L 19115636 19115662 chr3L 19115815 19115841 BS 5 179 7.5 4.0 5.8 0.7 205 chr3L 19115636 intron CG14082 - chr3L 19115738 intron CG14082 - chr3L 19115841 intron CG14082 - chr3L_5_19115001 chr3L_19115001 RC1_1-HE 1808 chr3L 19117051 19117070 chr3L 19124494 19124518 mdg1 9 7447 6.0 8.0 7.0 1.1 7467 chr3L 19117051 intron CG14082 - chr3L 19120784 intron CG14082 - chr3L 19124518 intron CG14082 - chr3L_9_19120001 chr3L_19120001 RC1_1-HE 1809 chr3L 19127732 19127747 chr3L 19127820 19127835 6 88 8.0 3.0 5.5 0.9 103 chr3L 19127732 intron CG14082 - chr3L 19127784 intron CG14082 - chr3L 19127835 intron CG14082 - chr3L_6_19125001 chr3L_19125001 RC1_1-HE 1810 chr3L 19186790 19186809 chr3L 19186907 19186926 12 117 9.5 6.5 8.0 1.3 136 chr3L 19186790 intron fz2 - chr3L 19186858 intron fz2 - chr3L 19186926 intron fz2 - chr3L_12_19185001 chr3L_19185001 RC1_1-HE 1811 chr3L 19187155 19187189 chr3L 19187235 19187262 9 79 7.5 5.0 6.2 1.2 107 chr3L 19187155 intron fz2 - chr3L 19187208 intron fz2 - chr3L 19187262 intron fz2 - chr3L_9_19185001 chr3L_19185001 RC1_1-HE 1812 chr3L 19206798 19206824 chr3L 19206879 19206905 10 81 6.0 6.0 6.0 1.4 107 chr3L 19206798 intron fz2 - chr3L 19206852 intron fz2 - chr3L 19206905 intron fz2 - chr3L_10_19205001 chr3L_19205001 RC1_1-HE 1813 chr3L 19208057 19208087 chr3L 19209432 19209462 Doc 17 1375 8.5 4.5 6.5 2.3 1405 chr3L 19208057 intron fz2 - chr3L 19208760 intron fz2 - chr3L 19209462 intron fz2 - chr3L_17_19205001 chr3L_19205001 RC1_1-HE 1814 chr3L 19210117 19210141 chr3L 19210214 19210238 12 97 0.0 4.0 2.0 4.0 121 chr3L 19210117 intron fz2 - chr3L 19210178 intron fz2 - chr3L 19210238 intron fz2 - chr3L_12_19210001 chr3L_19210001 RC1_1-HE 1815 chr3L 19238723 19238751 chr3L 19238831 19238858 15 108 1.5 2.5 2.0 5.0 135 chr3L 19238723 intergenic not near genes chr3L 19238790 intergenic not near genes chr3L 19238858 intergenic not near genes chr3L_15_19235001 chr3L_19235001 RC1_1-HE 1816 chr3L 19253811 19253846 chr3L 19253889 19253924 10 78 3.5 3.0 3.2 2.4 113 chr3L 19253811 3` UTR mRpL21 - chr3L 19253868 3` UTR mRpL21 - chr3L 19253924 3` UTR mRpL21 - chr3L_10_19250001 chr3L_19250001 RC1_1-HE 1817 chr3L 19274185 19274213 chr3L 19274265 19274293 7 80 0.0 2.0 1.0 3.5 108 chr3L 19274185 intergenic CG14085 + chr3L 19274239 intergenic CG14085 + chr3L 19274293 intergenic CG14085 + chr3L_7_19270001 chr3L_19270001 RC1_1-HE 1818 chr3L 19328767 19328796 chr3L 19328843 19328877 19 80 3.5 5.0 4.2 3.7 110 chr3L 19328767 intron pip - chr3L 19328822 intron pip - chr3L 19328877 intron pip - chr3L_19_19325001 chr3L_19325001 RC1_1-HE 1819 chr3L 19342767 19342777 chr3L 19342859 19342869 7 92 7.0 3.0 5.0 1.2 102 chr3L 19342767 3` UTR CG32206 - chr3L 19342818 3` UTR CG32206 - chr3L 19342869 3` UTR CG32206 - chr3L_7_19340001 chr3L_19340001 RC1_1-HE 1820 chr3L 19365918 19365929 chr3L 19366016 19366027 6 98 0.0 6.5 3.2 1.4 109 chr3L 19365918 intron CG32206 - chr3L 19365972 intron CG32206 - chr3L 19366027 intron CG32206 - chr3L_6_19365001 chr3L_19365001 RC1_1-HE 1821 chr3L 19367486 19367514 chr3L 19367572 19367606 7 89 0.0 3.5 1.8 2.5 120 chr3L 19367486 intron CG32206 - chr3L 19367546 intron CG32206 - chr3L 19367606 intron CG32206 - chr3L_7_19365001 chr3L_19365001 RC1_1-HE 1822 chr3L 19407572 19407599 chr3L 19407661 19407688 9 89 2.0 4.0 3.0 2.2 116 chr3L 19407572 intron CG32206 - chr3L 19407630 intron CG32206 - chr3L 19407688 intron CG32206 - chr3L_9_19405001 chr3L_19405001 RC1_1-HE 1823 chr3L 19427457 19427491 chr3L 19427552 19427585 16 95 5.0 2.0 3.5 3.6 128 chr3L 19427457 intergenic not near genes chr3L 19427521 intergenic not near genes chr3L 19427585 intergenic not near genes chr3L_16_19425001 chr3L_19425001 RC1_1-HE 1824 chr3L 19439177 19439207 chr3L 19439251 19439287 4 78 1.5 4.0 2.8 1.1 110 chr3L 19439177 intergenic not near genes chr3L 19439232 intergenic not near genes chr3L 19439287 intergenic not near genes chr3L_4_19435001 chr3L_19435001 RC1_1-HE 1825 chr3L 19441083 19441097 chr3L 19441239 19441253 7 156 4.5 3.0 3.8 1.5 170 chr3L 19441083 3` UTR CR45732 - chr3L 19441168 3` UTR CR45732 - chr3L 19441253 intergenic CR45732 -,CG33062 - chr3L_7_19440001 chr3L_19440001 RC1_1-HE 1826 chr3L 19446370 19446377 chr3L 19446494 19446501 4 124 2.5 5.0 3.8 0.8 131 chr3L 19446370 intron CG33062 - chr3L 19446436 5` UTR CG33062 - chr3L 19446501 intergenic CG33062 - chr3L_4_19445001 chr3L_19445001 RC1_1-HE 1827 chr3L 19488476 19488486 chr3L 19488559 19488569 4 83 2.0 2.0 2.0 1.3 93 chr3L 19488476 intergenic pncr009:3L -,CG32212 + chr3L 19488522 intergenic pncr009:3L -,CG32212 + chr3L 19488569 intergenic pncr009:3L -,CG32212 + chr3L_4_19485001 chr3L_19485001 RC1_1-HE 1828 chr3L 19576377 19576395 chr3L 19576455 19576473 14 78 10.5 8.0 9.2 1.4 96 chr3L 19576377 intron Shal - chr3L 19576425 intron Shal - chr3L 19576473 intron Shal - chr3L_14_19575001 chr3L_19575001 RC1_1-HE 1829 chr3L 19581082 19581117 chr3L 19581167 19581202 23 85 7.0 5.0 6.0 3.3 120 chr3L 19581082 intron Shal - chr3L 19581142 intron Shal - chr3L 19581202 intron Shal - chr3L_23_19580001 chr3L_19580001 RC1_1-HE 1830 chr3L 19780024 19780055 chr3L 19780138 19780169 6 114 4.5 2.0 3.2 1.4 145 chr3L 19780024 intron,intron CG42637 -,Gyc76C - chr3L 19780096 5` UTR,5` UTR CG42637 -,Gyc76C - chr3L 19780169 5` UTR,5` UTR CG42637 -,Gyc76C - chr3L_6_19780001 chr3L_19780001 RC1_1-HE 1831 chr3L 19820301 19820316 chr3L 19827851 19827866 412 6 7550 6.0 4.0 5.0 1.0 7565 chr3L 19820301 intron Deaf1 + chr3L 19824084 intron Deaf1 + chr3L 19827866 intron Deaf1 + chr3L_6_19820001 chr3L_19820001 RC1_1-HE 1832 chr3L 19861831 19861848 chr3L 19863620 19863637 S-element 4 1789 2.0 1.5 1.8 1.4 1806 chr3L 19861831 5` UTR CR45433 + chr3L 19862734 intergenic not near genes chr3L 19863637 intergenic not near genes chr3L_4_19860001 chr3L_19860001 RC1_1-HE 1833 chr3L 19903103 19903115 chr3L 19903194 19903206 4 91 8.0 16.0 12.0 0.3 103 chr3L 19903103 intron,intron Mi-2 -,Su(Tpl) - chr3L 19903154 intron,intron Mi-2 -,Su(Tpl) - chr3L 19903206 intron,intron Mi-2 -,Su(Tpl) - chr3L_4_19900001 chr3L_19900001 RC1_1-HE 1834 chr3L 19925215 19925247 chr3L 19925294 19925326 24 79 4.0 7.0 5.5 3.7 111 chr3L 19925215 intron Grasp65 + chr3L 19925270 intron Grasp65 + chr3L 19925326 intron Grasp65 + chr3L_24_19925001 chr3L_19925001 RC1_1-HE 1835 chr3L 19981202 19981236 chr3L 19981283 19981317 10 79 2.0 2.5 2.2 3.1 115 chr3L 19981202 intergenic CG17732 + chr3L 19981260 intergenic CG17732 + chr3L 19981317 intergenic CG17732 + chr3L_10_19980001 chr3L_19980001 RC1_1-HE 1836 chr3L 20039764 20039783 chr3L 20040030 20040060 9 273 3.0 3.0 3.0 2.2 296 chr3L 20039764 intergenic not near genes chr3L 20039912 intergenic not near genes chr3L 20040060 intergenic not near genes chr3L_9_20035001 chr3L_20035001 RC1_1-HE 1837 chr3L 20113660 20113679 chr3L 20122918 20122937 roo 5 9258 3.0 2.0 2.5 1.4 9277 chr3L 20113660 intergenic not near genes chr3L 20118298 intergenic not near genes chr3L 20122937 intergenic not near genes chr3L_5_20115001 chr3L_20115001 RC1_1-HE 1838 chr3L 20123854 20123883 chr3L 20123947 20123976 11 93 3.5 1.5 2.5 3.1 122 chr3L 20123854 intergenic CG7365 - chr3L 20123915 intergenic CG7365 - chr3L 20123976 intergenic CG7365 - chr3L_11_20120001 chr3L_20120001 RC1_1-HE 1839 chr3L 20189967 20189976 chr3L 20190072 20190075 5 104 3.0 2.5 2.8 1.3 108 chr3L 20189967 intron CG42674 - chr3L 20190021 intron CG42674 - chr3L 20190075 intron CG42674 - chr3L_5_20190001 chr3L_20190001 RC1_1-HE 1840 chr3L 20196968 20196999 chr3L 20197046 20197077 5 78 2.5 1.0 1.8 1.8 109 chr3L 20196968 intron CG42674 - chr3L 20197022 intron CG42674 - chr3L 20197077 intron CG42674 - chr3L_5_20195001 chr3L_20195001 RC1_1-HE 1841 chr3L 20251138 20251173 chr3L 20251226 20251242 14 86 5.0 6.0 5.5 2.2 104 chr3L 20251138 intron rdgC + chr3L 20251190 intron rdgC + chr3L 20251242 intron rdgC + chr3L_14_20250001 chr3L_20250001 RC1_1-HE 1842 chr3L 20257332 20257357 chr3L 20258453 20258478 pogo 13 1121 3.5 8.0 5.8 1.9 1146 chr3L 20257332 intron rdgC + chr3L 20257905 intron rdgC + chr3L 20258478 intron rdgC + chr3L_13_20255001 chr3L_20255001 RC1_1-HE 1843 chr3L 20290316 20290354 chr3L 20290498 20290509 11 180 1.5 6.5 4.0 2.2 193 chr3L 20290316 intron gogo - chr3L 20290412 intron gogo - chr3L 20290509 intron gogo - chr3L_11_20290001 chr3L_20290001 RC1_1-HE 1844 chr3L 20292290 20292301 chr3L 20292368 20292400 5 95 1.5 6.5 4.0 1.0 110 chr3L 20292290 intron gogo - chr3L 20292345 intron gogo - chr3L 20292400 intron gogo - chr3L_5_20290001 chr3L_20290001 RC1_1-HE 1845 chr3L 20345604 20345637 chr3L 20345686 20345719 5 82 5.0 1.5 3.2 1.2 115 chr3L 20345604 intergenic Rbbp5 - chr3L 20345662 intergenic Rbbp5 - chr3L 20345719 intergenic Rbbp5 - chr3L_5_20345001 chr3L_20345001 RC1_1-HE 1846 chr3L 20476755 20476773 chr3L 20484355 20484373 springer 5 7600 5.5 1.0 3.2 1.2 7618 chr3L 20476755 3` UTR isoQC + chr3L 20480564 intergenic not near genes chr3L 20484373 3` UTR ZnT77C - chr3L_5_20480001 chr3L_20480001 RC1_1-HE 1847 chr3L 20476774 20476786 chr3L 20484352 20484386 springer 5 7596 4.0 0.5 2.2 1.6 7612 chr3L 20476774 3` UTR isoQC + chr3L 20480580 intergenic not near genes chr3L 20484386 3` UTR ZnT77C - chr3L_5_20480001 chr3L_20480001 RC1_1-HE 1848 chr3L 20536306 20536343 chr3L 20536388 20536425 22 81 3.0 2.5 2.8 5.8 119 chr3L 20536306 intron Rcd2 - chr3L 20536366 intron Rcd2 - chr3L 20536425 intron Rcd2 - chr3L_22_20535001 chr3L_20535001 RC1_1-HE 1849 chr3L 20548365 20548386 chr3L 20548454 20548477 11 90 7.5 7.0 7.2 1.3 112 chr3L 20548365 intergenic not near genes chr3L 20548421 intergenic not near genes chr3L 20548477 intergenic not near genes chr3L_11_20545001 chr3L_20545001 RC1_1-HE 1850 chr3L 20549457 20549489 chr3L 20549607 20549639 21 150 6.5 5.0 5.8 3.1 182 chr3L 20549457 intergenic not near genes chr3L 20549548 intergenic not near genes chr3L 20549639 intergenic not near genes chr3L_21_20545001 chr3L_20545001 RC1_1-HE 1851 chr3L 20556466 20556494 chr3L 20556553 20556581 15 87 8.0 8.0 8.0 1.7 115 chr3L 20556466 intergenic not near genes chr3L 20556524 intergenic not near genes chr3L 20556581 intergenic not near genes chr3L_15_20555001 chr3L_20555001 RC1_1-HE 1852 chr3L 20565213 20565250 chr3L 20565307 20565344 22 93 3.0 5.5 4.2 4.2 131 chr3L 20565213 intergenic not near genes chr3L 20565278 intergenic not near genes chr3L 20565344 intergenic not near genes chr3L_22_20565001 chr3L_20565001 RC1_1-HE 1853 chr3L 20568318 20568339 chr3L 20568419 20568440 11 101 9.5 4.5 7.0 1.4 122 chr3L 20568318 intergenic not near genes chr3L 20568379 intergenic not near genes chr3L 20568440 intergenic not near genes chr3L_11_20565001 chr3L_20565001 RC1_1-HE 1854 chr3L 20590062 20590076 chr3L 20590602 20590616 412 7 540 9.0 4.5 6.8 0.9 554 chr3L 20590062 intergenic not near genes chr3L 20590339 intergenic not near genes chr3L 20590616 intergenic not near genes chr3L_7_20590001 chr3L_20590001 RC1_1-HE 1855 chr3L 20590077 20590096 chr3L 20590601 20590636 412 6 537 4.5 4.5 4.5 1.1 559 chr3L 20590077 intergenic not near genes chr3L 20590356 intergenic not near genes chr3L 20590636 intergenic not near genes chr3L_6_20590001 chr3L_20590001 RC1_1-HE 1856 chr3L 20594800 20594832 chr3L 20594884 20594916 15 84 5.5 7.0 6.2 2.1 116 chr3L 20594800 intergenic not near genes chr3L 20594858 intergenic not near genes chr3L 20594916 intergenic not near genes chr3L_15_20590001 chr3L_20590001 RC1_1-HE 1857 chr3L 20601977 20602001 chr3L 20602056 20602080 10 79 1.5 6.5 4.0 2.0 103 chr3L 20601977 intron knrl - chr3L 20602028 intron knrl - chr3L 20602080 intron knrl - chr3L_10_20600001 chr3L_20600001 RC1_1-HE 1858 chr3L 20690882 20690898 chr3L 20691133 20691165 10 265 0.0 5.5 2.8 2.6 283 chr3L 20690882 intergenic not near genes chr3L 20691024 intergenic not near genes chr3L 20691165 intergenic not near genes chr3L_10_20690001 chr3L_20690001 RC1_1-HE 1859 chr3L 20748584 20748616 chr3L 20750911 20750943 13 2327 2.0 3.0 2.5 3.7 2359 chr3L 20748584 intergenic not near genes chr3L 20749764 intergenic not near genes chr3L 20750943 intergenic not near genes chr3L_13_20745001 chr3L_20745001 RC1_1-HE 1860 chr3L 20821292 20821294 chr3L 20824762 20824764 NOF 4 3470 4.0 5.0 4.5 0.7 3472 chr3L 20821292 intron Pka-R1 + chr3L 20823028 intron Pka-R1 + chr3L 20824764 intron Pka-R1 + chr3L_4_20820001 chr3L_20820001 RC1_1-HE 1861 chr3L 20849269 20849302 chr3L 20849349 20849382 12 80 4.5 2.5 3.5 2.7 113 chr3L 20849269 intron CG32432 - chr3L 20849326 intron CG32432 - chr3L 20849382 intron CG32432 - chr3L_12_20845001 chr3L_20845001 RC1_1-HE 1862 chr3L 20858074 20858104 chr3L 20858174 20858204 13 100 4.0 5.0 4.5 2.4 130 chr3L 20858074 intron CG32432 - chr3L 20858139 intron CG32432 - chr3L 20858204 intron CG32432 - chr3L_13_20855001 chr3L_20855001 RC1_1-HE 1863 chr3L 20899112 20899125 chr3L 20899225 20899238 5 113 1.0 7.0 4.0 1.0 126 chr3L 20899112 intergenic not near genes chr3L 20899175 intergenic not near genes chr3L 20899238 intergenic not near genes chr3L_5_20895001 chr3L_20895001 RC1_1-HE 1864 chr3L 20924406 20924423 chr3L 20924483 20924500 8 77 4.0 3.0 3.5 1.8 94 chr3L 20924406 intergenic not near genes chr3L 20924453 intergenic not near genes chr3L 20924500 intergenic not near genes chr3L_8_20920001 chr3L_20920001 RC1_1-HE 1865 chr3L 20927497 20927524 chr3L 20927598 20927609 6 96 3.5 5.5 4.5 1.1 112 chr3L 20927497 intron fng - chr3L 20927553 intron fng - chr3L 20927609 intron fng - chr3L_6_20925001 chr3L_20925001 RC1_1-HE 1866 chr3L 20975902 20975930 chr3L 20976055 20976083 10 153 1.5 4.0 2.8 2.6 181 chr3L 20975902 intergenic not near genes chr3L 20975992 intergenic not near genes chr3L 20976083 intergenic not near genes chr3L_10_20975001 chr3L_20975001 RC1_1-HE 1867 chr3L 21014914 21014944 chr3L 21023396 21023426 Tirant 11 8482 4.5 10.5 7.5 1.3 8512 chr3L 21014914 intron skd - chr3L 21019170 intron skd - chr3L 21023426 intron skd - chr3L_11_21015001 chr3L_21015001 RC1_1-HE 1868 chr3L 21151861 21151894 chr3L 21156946 21156979 flea 19 5084 6.0 2.0 4.0 3.8 5118 chr3L 21151861 intron Ac78C - chr3L 21154420 intron Ac78C - chr3L 21156979 intron Ac78C - chr3L_19_21150001 chr3L_21150001 RC1_1-HE 1869 chr3L 21194153 21194183 chr3L 21194287 21194317 8 134 3.0 2.0 2.5 2.3 164 chr3L 21194153 intergenic not near genes chr3L 21194235 intergenic not near genes chr3L 21194317 intergenic park - chr3L_8_21190001 chr3L_21190001 RC1_1-HE 1870 chr3L 21232457 21232490 chr3L 21232577 21232612 20 121 2.0 2.0 2.0 6.7 155 chr3L 21232457 intron Eip78C + chr3L 21232534 intron Eip78C + chr3L 21232612 intron Eip78C + chr3L_20_21230001 chr3L_21230001 RC1_1-HE 1871 chr3L 21306147 21306179 chr3L 21315307 21315339 roo 7 9160 3.5 3.5 3.5 1.6 9192 chr3L 21306147 3` UTR,3` UTR CG7632 +,Pc - chr3L 21310743 intron Pc - chr3L 21315339 3` UTR Pc - chr3L_7_21310001 chr3L_21310001 RC1_1-HE 1872 chr3L 21372719 21372749 chr3L 21379228 21379258 McClintock 15 6509 8.0 4.0 6.0 2.1 6539 chr3L 21372719 intergenic not near genes chr3L 21375988 intergenic not near genes chr3L 21379258 intergenic not near genes chr3L_15_21375001 chr3L_21375001 RC1_1-HE 1873 chr3L 21406993 21407022 chr3L 21407073 21407102 12 79 6.0 5.0 5.5 1.8 109 chr3L 21406993 intron rgn + chr3L 21407048 intron rgn + chr3L 21407102 intron rgn + chr3L_12_21405001 chr3L_21405001 RC1_1-HE 1874 chr3L 21493766 21493777 chr3L 21494008 21494019 7 242 6.5 0.0 3.2 1.7 253 chr3L 21493766 exon CG7519 + chr3L 21493892 3` UTR CG7519 + chr3L 21494019 3` UTR Hr78 - chr3L_7_21490001 chr3L_21490001 RC1_1-HE 1875 chr3L 21498837 21498867 chr3L 21500474 21500504 1360 12 1636 4.0 8.0 6.0 1.7 1667 chr3L 21498837 intron Glg1 - chr3L 21499670 intron Glg1 - chr3L 21500504 intron Glg1 - chr3L_12_21495001 chr3L_21495001 RC1_1-HE 1876 chr3L 21604947 21604963 chr3L 21605196 21605212 7 248 7.0 4.5 5.8 1.0 265 chr3L 21604947 intron TfAP-2 + chr3L 21605080 intron TfAP-2 + chr3L 21605212 intron TfAP-2 + chr3L_7_21605001 chr3L_21605001 RC1_1-HE 1877 chr3L 21749318 21749350 chr3L 21754478 21754502 Doc 8 5158 1.5 2.0 1.8 2.9 5184 chr3L 21749318 intron Syn1 - chr3L 21751910 intron Syn1 - chr3L 21754502 intron Syn1 - chr3L_8_21750001 chr3L_21750001 RC1_1-HE 1878 chr3L 21765562 21765595 chr3L 21765931 21765964 11 369 34.0 24.0 29.0 0.4 402 chr3L 21765562 intron Syn1 - chr3L 21765763 intron Syn1 - chr3L 21765964 intron Syn1 - chr3L_11_21765001 chr3L_21765001 RC1_1-HE 1879 chr3L 21792248 21792277 chr3L 21792655 21792689 15 411 2.5 4.0 3.2 3.6 441 chr3L 21792248 intergenic not near genes chr3L 21792468 intergenic not near genes chr3L 21792689 intergenic not near genes chr3L_15_21790001 chr3L_21790001 RC1_1-HE 1880 chr3L 21821560 21821570 chr3L 21821764 21821774 5 204 9.5 7.0 8.2 0.5 214 chr3L 21821560 intergenic CycH + chr3L 21821667 intergenic CycH + chr3L 21821774 intergenic CycH + chr3L_5_21820001 chr3L_21820001 RC1_1-HE 1881 chr3L 21836725 21836756 chr3L 21836812 21836843 7 87 3.0 3.0 3.0 1.8 118 chr3L 21836725 3` UTR P5CDh1 - chr3L 21836784 3` UTR P5CDh1 - chr3L 21836843 3` UTR P5CDh1 - chr3L_7_21835001 chr3L_21835001 RC1_1-HE 1882 chr3L 21994596 21994630 chr3L 21994995 21995029 8 399 2.5 5.5 4.0 1.6 433 chr3L 21994596 intergenic not near genes chr3L 21994812 intergenic not near genes chr3L 21995029 intergenic not near genes chr3L_8_21990001 chr3L_21990001 RC1_1-HE 1883 chr3L 21998782 21998813 chr3L 21998876 21998907 7 92 6.5 5.0 5.8 1.0 125 chr3L 21998782 intergenic not near genes chr3L 21998844 intergenic not near genes chr3L 21998907 intergenic not near genes chr3L_7_21995001 chr3L_21995001 RC1_1-HE 1884 chr3L 22010627 22010660 chr3L 22010777 22010810 14 150 3.5 5.0 4.2 2.7 183 chr3L 22010627 intergenic not near genes chr3L 22010718 intergenic not near genes chr3L 22010810 intergenic not near genes chr3L_14_22010001 chr3L_22010001 RC1_1-HE 1885 chr3L 22016290 22016317 chr3L 22022624 22022651 9 6335 28.5 24.0 26.2 0.3 6361 chr3L 22016290 intergenic not near genes chr3L 22019470 intergenic not near genes chr3L 22022651 intergenic not near genes chr3L_9_22015001 chr3L_22015001 RC1_1-HE 1886 chr3L 22065580 22065604 chr3L 22065660 22065668 4 76 4.0 2.5 3.2 1.0 88 chr3L 22065580 intergenic Oct-TyrR +,CG14561 + chr3L 22065624 intergenic CG14561 +,Oct-TyrR + chr3L 22065668 intergenic CG14561 +,Oct-TyrR + chr3L_4_22065001 chr3L_22065001 RC1_1-HE 1887 chr3L 22098872 22098896 chr3L 22098953 22098979 4 82 4.5 3.5 4.0 0.8 107 chr3L 22098872 intergenic not near genes chr3L 22098926 intergenic not near genes chr3L 22098979 intergenic not near genes chr3L_4_22095001 chr3L_22095001 RC1_1-HE 1888 chr3L 22099673 22099702 chr3L 22105860 22105872 3S18 13 6186 5.0 6.5 5.8 1.9 6199 chr3L 22099673 intergenic not near genes chr3L 22102772 intergenic not near genes chr3L 22105872 intergenic not near genes chr3L_13_22100001 chr3L_22100001 RC1_1-HE 1889 chr3L 22114786 22114817 chr3L 22114862 22114896 17 78 4.0 5.5 4.8 2.9 110 chr3L 22114786 intergenic not near genes chr3L 22114841 intergenic not near genes chr3L 22114896 intergenic not near genes chr3L_17_22110001 chr3L_22110001 RC1_1-HE 1890 chr3L 22130499 22130523 chr3L 22130646 22130670 9 147 2.0 2.5 2.2 2.8 171 chr3L 22130499 intergenic not near genes chr3L 22130584 intergenic not near genes chr3L 22130670 intergenic not near genes chr3L_9_22130001 chr3L_22130001 RC1_1-HE 1891 chr3L 22268181 22268219 chr3L 22268491 22268529 27 310 5.5 5.0 5.2 4.4 348 chr3L 22268181 intron Csp + chr3L 22268355 intron Csp + chr3L 22268529 intron Csp + chr3L_27_22265001 chr3L_22265001 RC1_1-HE 1892 chr3L 22309071 22309104 chr3L 22309157 22309190 18 84 4.0 5.0 4.5 3.3 119 chr3L 22309071 intron Ten-m - chr3L 22309130 intron Ten-m - chr3L 22309190 intron Ten-m - chr3L_18_22305001 chr3L_22305001 RC1_1-HE 1893 chr3L 22349934 22349943 chr3L 22350012 22350021 6 78 9.5 9.0 9.2 0.6 87 chr3L 22349934 intron Ten-m - chr3L 22349978 intron Ten-m - chr3L 22350021 intron Ten-m - chr3L_6_22345001 chr3L_22345001 RC1_1-HE 1894 chr3L 22349944 22349959 chr3L 22350007 22350013 10 73 7.0 7.0 7.0 1.2 69 chr3L 22349944 intron Ten-m - chr3L 22349978 intron Ten-m - chr3L 22350013 intron Ten-m - chr3L_10_22345001 chr3L_22345001 RC1_1-HE 1895 chr3L 22522696 22522726 chr3L 22522774 22522804 12 78 6.0 5.5 5.8 1.8 108 chr3L 22522696 intergenic not near genes chr3L 22522750 intergenic not near genes chr3L 22522804 intergenic not near genes chr3L_12_22520001 chr3L_22520001 RC1_1-HE 1896 chr3L 22528692 22528726 chr3L 22528797 22528831 17 105 5.0 5.5 5.2 2.7 139 chr3L 22528692 intergenic not near genes chr3L 22528762 intergenic not near genes chr3L 22528831 intergenic not near genes chr3L_17_22525001 chr3L_22525001 RC1_1-HE 1897 chr3L 22537452 22537473 chr3L 22537553 22537574 9 101 2.5 4.0 3.2 2.1 122 chr3L 22537452 intergenic not near genes chr3L 22537513 intergenic not near genes chr3L 22537574 intergenic not near genes chr3L_9_22535001 chr3L_22535001 RC1_1-HE 1898 chr3L 22555772 22555801 chr3L 22563243 22563272 blood 16 7470 3.0 2.5 2.8 4.2 7500 chr3L 22555772 intergenic not near genes chr3L 22559522 intergenic not near genes chr3L 22563272 intergenic not near genes chr3L_16_22555001 chr3L_22555001 RC1_1-HE 1899 chr3L 22555638 22555664 chr3L 22565371 22565397 blood 11 9733 33.5 38.5 36.0 0.3 9759 chr3L 22555638 intergenic not near genes chr3L 22560518 intergenic not near genes chr3L 22565397 intergenic not near genes chr3L_11_22560001 chr3L_22560001 RC1_1-HE 1900 chr3L 22577623 22577648 chr3L 22582412 22582435 Doc 14 4788 6.0 6.0 6.0 2.0 4812 chr3L 22577623 intergenic not near genes chr3L 22580029 intergenic not near genes chr3L 22582435 3` UTR CG14459 - chr3L_14_22580001 chr3L_22580001 RC1_1-HE 1901 chr3L 22617188 22617218 chr3L 22624641 22624671 blood 14 7453 2.5 2.5 2.5 4.0 7483 chr3L 22617188 intron CG14459 - chr3L 22620930 intron CG14459 - chr3L 22624671 intron CG14459 - chr3L_14_22620001 chr3L_22620001 RC1_1-HE 1902 chr3L 22757499 22757510 chr3L 22757571 22757592 5 79 1.0 2.5 1.8 1.8 93 chr3L 22757499 intron SPoCk + chr3L 22757546 intron SPoCk + chr3L 22757592 intron SPoCk + chr3L_5_22755001 chr3L_22755001 RC1_1-HE 1903 chr3L 22761386 22761418 chr3L 22766821 22766853 Ivk 11 5435 6.0 3.5 4.8 1.9 5467 chr3L 22761386 intron SPoCk + chr3L 22764120 intron SPoCk + chr3L 22766853 intron SPoCk + chr3L_11_22760001 chr3L_22760001 RC1_1-HE 1904 chr3L 22865997 22866016 chr3L 22867116 22867119 Doc 6 1126 2.0 3.0 2.5 1.7 1122 chr3L 22865997 intron CG33170 + chr3L 22866558 intron CG33170 + chr3L 22867119 intron CG33170 + chr3L_6_22865001 chr3L_22865001 RC1_1-HE 1905 chr3L 22888743 22888765 chr3L 22888835 22888857 11 92 2.5 4.0 3.2 2.6 114 chr3L 22888743 intron slif + chr3L 22888800 intron slif + chr3L 22888857 intron slif + chr3L_11_22885001 chr3L_22885001 RC1_1-HE 1906 chr3L 22926550 22926577 chr3L 22926631 22926658 7 81 3.0 2.0 2.5 2.0 108 chr3L 22926550 intergenic not near genes chr3L 22926604 intergenic not near genes chr3L 22926658 intergenic not near genes chr3L_7_22925001 chr3L_22925001 RC1_1-HE 1907 chr3L 22970219 22970252 chr3L 22970296 22970329 15 77 4.0 4.0 4.0 3.0 110 chr3L 22970219 intergenic not near genes chr3L 22970274 intergenic not near genes chr3L 22970329 intergenic not near genes chr3L_15_22970001 chr3L_22970001 RC1_1-HE 1908 chr3L 22989860 22989894 chr3L 22996835 22996868 297 12 6975 1.5 3.0 2.2 3.8 7008 chr3L 22989860 intergenic not near genes chr3L 22993364 intergenic not near genes chr3L 22996868 intergenic not near genes chr3L_12_22990001 chr3L_22990001 RC1_1-HE 1909 chr3L 23004909 23004936 chr3L 23005235 23005263 9 327 2.5 3.0 2.8 2.4 354 chr3L 23004909 intron nrm + chr3L 23005086 intron nrm + chr3L 23005263 intron nrm + chr3L_9_23005001 chr3L_23005001 RC1_1-HE 1910 chr3L 23042223 23042255 chr3L 23048977 23049009 gypsy6 9 6754 3.0 3.0 3.0 2.2 6786 chr3L 23042223 intergenic not near genes chr3L 23045616 intergenic not near genes chr3L 23049009 intergenic not near genes chr3L_9_23045001 chr3L_23045001 RC1_1-HE 1911 chr3L 23182823 23182847 chr3L 23182900 23182924 6 77 2.0 2.0 2.0 2.0 101 chr3L 23182823 intron CG34031 + chr3L 23182874 intron CG34031 + chr3L 23182924 intron CG34031 + chr3L_6_23180001 chr3L_23180001 RC1_1-HE 1912 chr3L 23218489 23218513 chr3L 23218618 23218642 4 129 1.0 0.0 0.5 2.7 153 chr3L 23218489 intron nAChRalpha4 + chr3L 23218566 intron nAChRalpha4 + chr3L 23218642 intron nAChRalpha4 + chr3L_4_23215001 chr3L_23215001 RC1_1-HE 1913 chr3L 23253333 23253368 chr3L 23253419 23253454 6 86 3.0 2.5 2.8 1.6 121 chr3L 23253333 intron nAChRalpha4 + chr3L 23253394 intron nAChRalpha4 + chr3L 23253454 intron nAChRalpha4 + chr3L_6_23250001 chr3L_23250001 RC1_1-HE 1914 chr3L 23280147 23280178 chr3L 23280256 23280287 14 109 6.0 6.5 6.2 1.9 140 chr3L 23280147 intron nAChRalpha4 + chr3L 23280217 intron nAChRalpha4 + chr3L 23280287 intron nAChRalpha4 + chr3L_14_23280001 chr3L_23280001 RC1_1-HE 1915 chr3L 23451759 23451784 chr3L 23451832 23451863 13 77 6.0 10.0 8.0 1.4 104 chr3L 23451759 intergenic not near genes chr3L 23451811 intergenic not near genes chr3L 23451863 intergenic not near genes chr3L_13_23450001 chr3L_23450001 RC1_1-HE 1916 chr3L 23455559 23455594 chr3L 23455711 23455746 19 151 2.5 3.5 3.0 4.8 187 chr3L 23455559 intergenic not near genes chr3L 23455652 intergenic not near genes chr3L 23455746 intergenic not near genes chr3L_19_23455001 chr3L_23455001 RC1_1-HE 1917 chr3L 23532588 23532612 chr3L 23532679 23532703 7 91 1.5 6.5 4.0 1.4 115 chr3L 23532588 intergenic not near genes chr3L 23532646 intergenic not near genes chr3L 23532703 intergenic not near genes chr3L_7_23530001 chr3L_23530001 RC1_1-HE 1918 chr3L 23590215 23590248 chr3L 23590315 23590348 4 100 10.5 14.0 12.2 0.3 133 chr3L 23590215 intron AGO3 + chr3L 23590282 intron AGO3 + chr3L 23590348 intron AGO3 + chr3L_4_23590001 chr3L_23590001 RC1_1-HE 1919 chr3L 23770588 23770616 chr3L 23770669 23770697 6 81 5.0 2.5 3.8 1.2 109 chr3L 23770588 intergenic not near genes chr3L 23770642 intergenic not near genes chr3L 23770697 intergenic not near genes chr3L_6_23770001 chr3L_23770001 RC1_1-HE 1920 chr3L 24009667 24009684 chr3L 24009850 24009867 6 183 3.0 3.0 3.0 1.5 200 chr3L 24009667 intergenic CR40053 - chr3L 24009767 intergenic CR40053 - chr3L 24009867 intergenic CR40053 - chr3L_6_24005001 chr3L_24005001 RC1_1-HE 1921 chr3L 24021277 24021310 chr3L 24022434 24022468 1360 5 1158 1.5 0.5 1.0 2.5 1191 chr3L 24021277 intergenic not near genes chr3L 24021872 intergenic not near genes chr3L 24022468 intergenic not near genes chr3L_5_24020001 chr3L_24020001 RC1_1-HE 1922 chr3L 24168785 24168810 chr3L 24176114 24176138 ZAM 9 7329 7.0 3.5 5.2 1.5 7353 chr3L 24168785 intron Snap25 + chr3L 24172462 intron Snap25 + chr3L 24176138 intron Snap25 + chr3L_9_24170001 chr3L_24170001 RC1_1-HE 1923 chr3L 24565173 24565197 chr3L 24565441 24565465 8 268 10.5 6.0 8.2 0.9 292 chr3L 24565173 intergenic not near genes chr3L 24565319 intergenic not near genes chr3L 24565465 intergenic not near genes chr3L_8_24565001 chr3L_24565001 RC1_1-HE 1924 chr3L 24752313 24752328 chr3L 24752402 24752417 5 89 2.0 1.5 1.8 1.8 104 chr3L 24752313 intron scro + chr3L 24752365 intron scro + chr3L 24752417 intron scro + chr3L_5_24750001 chr3L_24750001 RC1_1-HE 1925 chr3L 24761484 24761515 chr3L 24761564 24761595 11 80 3.0 2.0 2.5 3.1 111 chr3L 24761484 intron scro + chr3L 24761540 intron scro + chr3L 24761595 intron scro + chr3L_11_24760001 chr3L_24760001 RC1_1-HE 1926 chr3L 25331638 25331652 chr3L 25331730 25331744 7 91 9.0 6.0 7.5 0.8 106 chr3L 25331638 intergenic not near genes chr3L 25331691 intergenic not near genes chr3L 25331744 intergenic not near genes chr3L_7_25330001 chr3L_25330001 RC1_1-HE 1927 chr3L 25455344 25455354 chr3L 25455943 25455945 INE-1 6 598 1.5 4.5 3.0 1.5 601 chr3L 25455344 intergenic not near genes chr3L 25455644 intergenic not near genes chr3L 25455945 intergenic not near genes chr3L_6_25455001 chr3L_25455001 RC1_1-HE 1928 chr3L 25628504 25628528 chr3L 25633276 25633300 F-element 12 4771 2.0 1.5 1.8 4.3 4796 chr3L 25628504 intron CG41343 - chr3L 25630902 intron CG41343 - chr3L 25633300 intron CG41343 - chr3L_12_25630001 chr3L_25630001 RC1_1-HE 1929 chr3L 25842479 25842500 chr3L 25842566 25842587 8 87 5.0 8.0 6.5 1.1 108 chr3L 25842479 intron CG40178 - chr3L 25842533 intron CG40178 - chr3L 25842587 intron CG40178 - chr3L_8_25840001 chr3L_25840001 RC1_1-HE 1930 chr3L 26694925 26694947 chr3L 26695006 26695028 7 81 3.5 1.5 2.5 2.0 103 chr3L 26694925 intergenic not near genes chr3L 26694976 intergenic not near genes chr3L 26695028 intergenic not near genes chr3L_7_26690001 chr3L_26690001 RC1_1-HE 1931 chr3L 27368876 27368902 chr3L 27369422 27369448 11 544 2.5 2.0 2.2 3.4 572 chr3L 27368876 intron Dbp80 + chr3L 27369162 intron Dbp80 + chr3L 27369448 intron Dbp80 + chr3L_11_27365001 chr3L_27365001 RC1_1-HE 1932 chr3L 27390689 27390700 chr3L 27390769 27390780 5 80 34.5 29.0 31.8 0.2 91 chr3L 27390689 intron Dbp80 + chr3L 27390734 intron Dbp80 + chr3L 27390780 intron Dbp80 + chr3L_5_27390001 chr3L_27390001 RC1_1-HE 1933 chr3R 758869 758892 chr3R 758975 758977 4 100 1.5 2.0 1.8 1.4 108 chr3R 758869 intergenic not near genes chr3R 758923 intergenic not near genes chr3R 758977 intergenic not near genes chr3R_4_755001 chr3R_755001 RC1_1-HE 1934 chr3R 1443428 1443451 chr3R 1443505 1443528 12 76 6.5 4.5 5.5 1.8 100 chr3R 1443428 intron CG40155 + chr3R 1443478 intron CG40155 + chr3R 1443528 intron CG40155 + chr3R_12_1440001 chr3R_1440001 RC1_1-HE 1935 chr3R 2534147 2534161 chr3R 2541711 2541731 4 7568 35.0 15.5 25.2 0.2 7584 chr3R 2534147 intergenic not near genes chr3R 2537939 intergenic not near genes chr3R 2541731 intergenic not near genes chr3R_4_2535001 chr3R_2535001 RC1_1-HE 1936 chr3R 3178699 3178710 chr3R 3595184 3595195 6 416485 2.0 0.5 1.2 2.7 416496 chr3R 3178699 intron CG42617 - chr3R 3386947 intergenic not near genes chr3R 3595195 intergenic not near genes chr3R_6_3385001 chr3R_3385001 RC1_1-HE 1937 chr3R 3524118 3524147 chr3R 3524202 3524231 8 81 1.5 5.0 3.2 1.9 113 chr3R 3524118 intron Parp - chr3R 3524174 intron Parp - chr3R 3524231 intron Parp - chr3R_8_3520001 chr3R_3520001 RC1_1-HE 1938 chr3R 3880271 3880298 chr3R 3880360 3880387 7 89 2.5 5.0 3.8 1.5 116 chr3R 3880271 intergenic not near genes chr3R 3880329 intergenic not near genes chr3R 3880387 intergenic not near genes chr3R_7_3880001 chr3R_3880001 RC1_1-HE 1939 chr3R 4063808 4063829 chr3R 4069089 4069110 9 5279 4.0 7.5 5.8 1.3 5302 chr3R 4063808 intergenic not near genes chr3R 4066459 intergenic not near genes chr3R 4069110 intergenic not near genes chr3R_9_4065001 chr3R_4065001 RC1_1-HE 1940 chr3R 4129730 4129759 chr3R 4130276 4130305 7 546 2.5 1.0 1.8 2.5 575 chr3R 4129730 intron Gfat1 + chr3R 4130018 intron Gfat1 + chr3R 4130305 intron Gfat1 + chr3R_7_4130001 chr3R_4130001 RC1_1-HE 1941 chr3R 4206071 4206103 chr3R 4211647 4211679 mdg3 6 5576 2.5 2.5 2.5 1.7 5608 chr3R 4206071 intron CG14636 - chr3R 4208875 intron CG14636 - chr3R 4211679 intron CG14636 - chr3R_6_4205001 chr3R_4205001 RC1_1-HE 1942 chr3R 4355783 4355791 chr3R 4355889 4355897 5 106 3.5 2.5 3.0 1.2 114 chr3R 4355783 intergenic not near genes chr3R 4355840 intergenic not near genes chr3R 4355897 intergenic not near genes chr3R_5_4355001 chr3R_4355001 RC1_1-HE 1943 chr3R 4366757 4366790 chr3R 4375141 4375174 roo 10 8382 3.5 2.5 3.0 2.5 8417 chr3R 4366757 3` UTR CG1090 + chr3R 4370966 intergenic not near genes chr3R 4375174 5` UTR CR44922 + chr3R_10_4370001 chr3R_4370001 RC1_1-HE 1944 chr3R 4477937 4477955 chr3R 4478015 4478033 8 78 27.5 30.5 29.0 0.3 96 chr3R 4477937 intron CG31523 - chr3R 4477985 intron CG31523 - chr3R 4478033 intron CG31523 - chr3R_8_4475001 chr3R_4475001 RC1_1-HE 1945 chr3R 4520853 4520887 chr3R 4520938 4520972 16 85 3.0 1.0 2.0 5.3 119 chr3R 4520853 intron CG34357 - chr3R 4520912 intron CG34357 - chr3R 4520972 intron CG34357 - chr3R_16_4520001 chr3R_4520001 RC1_1-HE 1946 chr3R 4538900 4538910 chr3R 4540161 4540171 1360 9 1261 3.0 11.5 7.2 1.1 1271 chr3R 4538900 intron CG34357 - chr3R 4539536 intron CG34357 - chr3R 4540171 intron CG34357 - chr3R_9_4535001 chr3R_4535001 RC1_1-HE 1947 chr3R 4558070 4558095 chr3R 4558147 4558172 6 77 2.5 6.0 4.2 1.2 102 chr3R 4558070 intergenic CG34357 - chr3R 4558121 intergenic CG34357 - chr3R 4558172 intergenic CG34357 - chr3R_6_4555001 chr3R_4555001 RC1_1-HE 1948 chr3R 4578792 4578807 chr3R 4578917 4578932 5 125 0.5 2.0 1.2 2.3 140 chr3R 4578792 intergenic CG32945 - chr3R 4578862 intergenic CG32945 - chr3R 4578932 intergenic CG32945 - chr3R_5_4575001 chr3R_4575001 RC1_1-HE 1949 chr3R 4609545 4609581 chr3R 4610710 4610746 1360 14 1165 4.5 3.5 4.0 2.8 1201 chr3R 4609545 intergenic not near genes chr3R 4610146 intergenic not near genes chr3R 4610746 intergenic not near genes chr3R_14_4610001 chr3R_4610001 RC1_1-HE 1950 chr3R 4636597 4636619 chr3R 4637018 4637040 INE-1 8 421 4.0 4.5 4.2 1.5 443 chr3R 4636597 intergenic not near genes chr3R 4636818 intergenic not near genes chr3R 4637040 intergenic not near genes chr3R_8_4635001 chr3R_4635001 RC1_1-HE 1951 chr3R 4753240 4753260 chr3R 4757544 4757564 F-element 11 4304 6.0 6.0 6.0 1.6 4324 chr3R 4753240 intron,intron atms +,CG44098 - chr3R 4755402 intron,intron atms +,CG44098 - chr3R 4757564 intron,exon atms +,CG44098 - chr3R_11_4755001 chr3R_4755001 RC1_1-HE 1952 chr3R 4759723 4759742 chr3R 4761221 4761240 hopper2 9 1498 5.0 4.5 4.8 1.6 1517 chr3R 4759723 intron,intron atms +,CG44098 - chr3R 4760482 intron,intron atms +,CG44098 - chr3R 4761240 intron,intron atms +,CG44098 - chr3R_9_4760001 chr3R_4760001 RC1_1-HE 1953 chr3R 4763839 4763878 chr3R 4763934 4763973 16 95 2.5 5.0 3.8 3.3 134 chr3R 4763839 intron,intron atms +,CG44098 - chr3R 4763906 intron,intron atms +,CG44098 - chr3R 4763973 intron,intron atms +,CG44098 - chr3R_16_4760001 chr3R_4760001 RC1_1-HE 1954 chr3R 4769160 4769191 chr3R 4769239 4769270 11 79 0.5 1.0 0.8 6.1 110 chr3R 4769160 intron,intron atms +,CG44098 - chr3R 4769215 intron,intron atms +,CG44098 - chr3R 4769270 intron,intron atms +,CG44098 - chr3R_11_4765001 chr3R_4765001 RC1_1-HE 1955 chr3R 4785655 4785688 chr3R 4785732 4785765 5 77 2.5 3.5 3.0 1.2 110 chr3R 4785655 intergenic not near genes chr3R 4785710 intergenic not near genes chr3R 4785765 intergenic not near genes chr3R_5_4785001 chr3R_4785001 RC1_1-HE 1956 chr3R 4861568 4861586 chr3R 4861650 4861668 5 82 5.0 4.0 4.5 0.9 100 chr3R 4861568 intron opa + chr3R 4861618 intron opa + chr3R 4861668 intron opa + chr3R_5_4860001 chr3R_4860001 RC1_1-HE 1957 chr3R 4887482 4887509 chr3R 4894858 4894887 rover 9 7378 3.5 7.0 5.2 1.5 7405 chr3R 4887482 intergenic not near genes chr3R 4891184 intergenic not near genes chr3R 4894887 intergenic not near genes chr3R_9_4890001 chr3R_4890001 RC1_1-HE 1958 chr3R 4895253 4895276 chr3R 4895475 4895498 7 222 2.5 3.5 3.0 1.8 245 chr3R 4895253 intergenic not near genes chr3R 4895376 intergenic not near genes chr3R 4895498 intergenic not near genes chr3R_7_4895001 chr3R_4895001 RC1_1-HE 1959 chr3R 4902672 4902692 chr3R 4902761 4902781 9 89 7.5 6.5 7.0 1.1 109 chr3R 4902672 intergenic not near genes chr3R 4902726 intergenic not near genes chr3R 4902781 intergenic not near genes chr3R_9_4900001 chr3R_4900001 RC1_1-HE 1960 chr3R 4904880 4904891 chr3R 18214687 18214698 6 13309807 28.0 13.0 20.5 0.3 13309818 chr3R 4904880 intergenic not near genes chr3R 11559789 3` UTR CG10898 + chr3R 18214698 3` UTR CG7985 + chr3R_6_11555001 chr3R_11555001 RC1_1-HE 1961 chr3R 4997934 4997961 chr3R 4998015 4998042 9 81 5.0 4.0 4.5 1.6 108 chr3R 4997934 intron CG2022 - chr3R 4997988 intron CG2022 - chr3R 4998042 intron CG2022 - chr3R_9_4995001 chr3R_4995001 RC1_1-HE 1962 chr3R 5000286 5000321 chr3R 5000394 5000419 26 108 4.5 6.0 5.2 4.2 133 chr3R 5000286 intron CG2022 - chr3R 5000352 intron CG2022 - chr3R 5000419 intron CG2022 - chr3R_26_5000001 chr3R_5000001 RC1_1-HE 1963 chr3R 5013864 5013897 chr3R 5013960 5013993 10 95 6.0 5.5 5.8 1.5 129 chr3R 5013864 intergenic not near genes chr3R 5013928 intergenic not near genes chr3R 5013993 intergenic not near genes chr3R_10_5010001 chr3R_5010001 RC1_1-HE 1964 chr3R 5032983 5033007 chr3R 5033070 5033095 13 88 0.0 6.5 3.2 3.1 112 chr3R 5032983 intergenic not near genes chr3R 5033039 intergenic not near genes chr3R 5033095 intergenic not near genes chr3R_13_5030001 chr3R_5030001 RC1_1-HE 1965 chr3R 5045844 5045878 chr3R 5052947 5052981 HMS-Beagle 11 7103 7.5 4.5 6.0 1.6 7137 chr3R 5045844 intron CR43635 - chr3R 5049412 intergenic not near genes chr3R 5052981 intergenic CR45588 - chr3R_11_5045001 chr3R_5045001 RC1_1-HE 1966 chr3R 5055359 5055391 chr3R 5055574 5055606 9 214 2.0 1.5 1.8 3.2 247 chr3R 5055359 intergenic not near genes chr3R 5055482 intergenic not near genes chr3R 5055606 intergenic not near genes chr3R_9_5055001 chr3R_5055001 RC1_1-HE 1967 chr3R 5067980 5068013 chr3R 5073498 5073531 mdg3 17 5518 5.0 6.0 5.5 2.6 5551 chr3R 5067980 intergenic not near genes chr3R 5070756 intergenic not near genes chr3R 5073531 intergenic not near genes chr3R_17_5070001 chr3R_5070001 RC1_1-HE 1968 chr3R 5157775 5157789 chr3R 5158128 5158143 4 353 16.5 14.5 15.5 0.2 368 chr3R 5157775 intron dpr16 + chr3R 5157959 intron dpr16 + chr3R 5158143 intron dpr16 + chr3R_4_5155001 chr3R_5155001 RC1_1-HE 1969 chr3R 5195190 5195223 chr3R 5195267 5195300 11 77 4.5 8.0 6.2 1.5 110 chr3R 5195190 intron cno - chr3R 5195245 intron cno - chr3R 5195300 intron cno - chr3R_11_5195001 chr3R_5195001 RC1_1-HE 1970 chr3R 5219098 5219133 chr3R 5219186 5219221 15 88 7.0 6.0 6.5 2.0 123 chr3R 5219098 intron Prosbeta2R2 - chr3R 5219160 intron Prosbeta2R2 - chr3R 5219221 intron Prosbeta2R2 - chr3R_15_5215001 chr3R_5215001 RC1_1-HE 1971 chr3R 5247199 5247223 chr3R 5247276 5247300 9 77 4.5 4.0 4.2 1.7 101 chr3R 5247199 intron CG12163 - chr3R 5247250 intron CG12163 - chr3R 5247300 intron CG12163 - chr3R_9_5245001 chr3R_5245001 RC1_1-HE 1972 chr3R 5278089 5278110 chr3R 5278171 5278192 4 80 4.5 3.0 3.8 0.8 103 chr3R 5278089 intron mtd - chr3R 5278140 intron mtd - chr3R 5278192 intron mtd - chr3R_4_5275001 chr3R_5275001 RC1_1-HE 1973 chr3R 5282990 5282994 chr3R 5283068 5283074 4 80 9.5 6.0 7.8 0.5 84 chr3R 5282990 intron mtd - chr3R 5283032 intron mtd - chr3R 5283074 intron mtd - chr3R_4_5280001 chr3R_5280001 RC1_1-HE 1974 chr3R 5335159 5335195 chr3R 5335239 5335275 9 80 2.5 1.5 2.0 3.0 116 chr3R 5335159 intron mtd - chr3R 5335217 intron mtd - chr3R 5335275 intron mtd - chr3R_9_5335001 chr3R_5335001 RC1_1-HE 1975 chr3R 5338396 5338428 chr3R 5343574 5343606 Rt1c 23 5178 8.5 10.5 9.5 2.2 5210 chr3R 5338396 intron mtd - chr3R 5341001 intron mtd - chr3R 5343606 intron mtd - chr3R_23_5340001 chr3R_5340001 RC1_1-HE 1976 chr3R 5445970 5445994 chr3R 5452431 5452455 Burdock 9 6460 1.5 3.5 2.5 2.6 6485 chr3R 5445970 intron CG14669 + chr3R 5449212 intron CG14669 + chr3R 5452455 intron CG14669 + chr3R_9_5445001 chr3R_5445001 RC1_1-HE 1977 chr3R 5717288 5717307 chr3R 5718745 5718764 5 1456 3.5 0.0 1.8 1.8 1476 chr3R 5717288 intergenic cas - chr3R 5718026 intergenic not near genes chr3R 5718764 intergenic not near genes chr3R_5_5715001 chr3R_5715001 RC1_1-HE 1978 chr3R 5717070 5717083 chr3R 5719278 5719284 4 2203 5.5 7.5 6.5 0.5 2214 chr3R 5717070 intergenic cas - chr3R 5718177 intergenic not near genes chr3R 5719284 intergenic not near genes chr3R_4_5715001 chr3R_5715001 RC1_1-HE 1979 chr3R 5726091 5726124 chr3R 5726254 5726287 8 163 0.5 3.0 1.8 2.9 196 chr3R 5726091 intergenic not near genes chr3R 5726189 intergenic not near genes chr3R 5726287 intergenic not near genes chr3R_8_5725001 chr3R_5725001 RC1_1-HE 1980 chr3R 5746015 5746041 chr3R 5746257 5746283 pogo 4 242 1.0 4.5 2.8 1.1 268 chr3R 5746015 3` UTR Madm + chr3R 5746149 3` UTR Madm + chr3R 5746283 3` UTR Madm + chr3R_4_5745001 chr3R_5745001 RC1_1-HE 1981 chr3R 5765627 5765656 chr3R 5765711 5765741 14 82 7.5 2.5 5.0 2.3 114 chr3R 5765627 intron CG2082 - chr3R 5765684 intron CG2082 - chr3R 5765741 intron CG2082 - chr3R_14_5765001 chr3R_5765001 RC1_1-HE 1982 chr3R 5809111 5809145 chr3R 5809353 5809387 pogo 15 242 2.0 2.5 2.2 4.7 276 chr3R 5809111 3` UTR CG11000 + chr3R 5809249 3` UTR CG11000 + chr3R 5809387 3` UTR CG11000 + chr3R_15_5805001 chr3R_5805001 RC1_1-HE 1983 chr3R 5933860 5933867 chr3R 6239083 6239090 7 305223 10.0 13.0 11.5 0.6 305230 chr3R 5933860 intron CG34113 - chr3R 6086475 intergenic not near genes chr3R 6239090 intergenic not near genes chr3R_7_6085001 chr3R_6085001 RC1_1-HE 1984 chr3R 5954325 5954359 chr3R 5954402 5954436 4 77 3.0 2.0 2.5 1.1 111 chr3R 5954325 intron CG34113 - chr3R 5954380 intron CG34113 - chr3R 5954436 intron CG34113 - chr3R_4_5950001 chr3R_5950001 RC1_1-HE 1985 chr3R 6015959 6015994 chr3R 6024441 6024476 Tirant 9 8481 3.0 2.5 2.8 2.4 8517 chr3R 6015959 intergenic not near genes chr3R 6020218 intergenic not near genes chr3R 6024476 intergenic not near genes chr3R_9_6020001 chr3R_6020001 RC1_1-HE 1986 chr3R 6028191 6028225 chr3R 6028273 6028308 20 83 8.0 6.0 7.0 2.5 117 chr3R 6028191 intergenic not near genes chr3R 6028250 intergenic not near genes chr3R 6028308 intergenic not near genes chr3R_20_6025001 chr3R_6025001 RC1_1-HE 1987 chr3R 6053776 6053801 chr3R 6053853 6053878 9 73 6.0 1.0 3.5 2.0 102 chr3R 6053776 intergenic CR44921 - chr3R 6053827 intergenic CR44921 - chr3R 6053878 intergenic CR44921 - chr3R_9_6050001 chr3R_6050001 RC1_1-HE 1988 chr3R 6057729 6057760 chr3R 6057827 6057847 9 96 2.5 1.5 2.0 3.0 118 chr3R 6057729 intergenic CG15580 - chr3R 6057788 intergenic CG15580 - chr3R 6057847 intergenic CG15580 - chr3R_9_6055001 chr3R_6055001 RC1_1-HE 1989 chr3R 6069305 6069330 chr3R 6069624 6069653 6 322 4.5 2.5 3.5 1.3 348 chr3R 6069305 intergenic not near genes chr3R 6069479 intergenic not near genes chr3R 6069653 intergenic not near genes chr3R_6_6065001 chr3R_6065001 RC1_1-HE 1990 chr3R 6113125 6113155 chr3R 6113216 6113246 9 90 3.5 4.5 4.0 1.8 121 chr3R 6113125 intergenic not near genes chr3R 6113186 intergenic not near genes chr3R 6113246 intergenic not near genes chr3R_9_6110001 chr3R_6110001 RC1_1-HE 1991 chr3R 6130887 6130922 chr3R 6130975 6131010 17 88 1.0 4.5 2.8 4.5 123 chr3R 6130887 intergenic not near genes chr3R 6130948 intergenic not near genes chr3R 6131010 intergenic not near genes chr3R_17_6130001 chr3R_6130001 RC1_1-HE 1992 chr3R 6133173 6133210 chr3R 6133251 6133288 16 78 4.0 5.5 4.8 2.8 115 chr3R 6133173 intergenic not near genes chr3R 6133230 intergenic not near genes chr3R 6133288 intergenic not near genes chr3R_16_6130001 chr3R_6130001 RC1_1-HE 1993 chr3R 6146932 6146953 chr3R 6147019 6147040 7 87 2.0 3.0 2.5 2.0 108 chr3R 6146932 intergenic not near genes chr3R 6146986 intergenic not near genes chr3R 6147040 intergenic not near genes chr3R_7_6145001 chr3R_6145001 RC1_1-HE 1994 chr3R 6158513 6158538 chr3R 6167097 6167122 Tirant 10 8582 3.0 4.5 3.8 2.1 8609 chr3R 6158513 intergenic not near genes chr3R 6162818 intergenic not near genes chr3R 6167122 intergenic CG1077 + chr3R_10_6160001 chr3R_6160001 RC1_1-HE 1995 chr3R 6175171 6175199 chr3R 6182444 6182472 HMS-Beagle2 8 7273 3.5 2.5 3.0 2.0 7301 chr3R 6175171 intergenic Osi1 + chr3R 6178822 intron CR45194 + chr3R 6182472 intergenic CR45194 + chr3R_8_6175001 chr3R_6175001 RC1_1-HE 1996 chr3R 6206282 6206318 chr3R 6206500 6206536 BS 14 218 3.5 6.0 4.8 2.4 254 chr3R 6206282 exon Osi24 + chr3R 6206409 intron Osi24 + chr3R 6206536 intron Osi24 + chr3R_14_6205001 chr3R_6205001 RC1_1-HE 1997 chr3R 6408637 6408663 chr3R 6408972 6408998 16 334 9.5 9.0 9.2 1.6 361 chr3R 6408637 intron gpp + chr3R 6408818 intron gpp + chr3R 6408998 intron,3` UTR gpp +,CR44017 - chr3R_16_6405001 chr3R_6405001 RC1_1-HE 1998 chr3R 6487983 6488007 chr3R 6488067 6488091 17 84 3.5 1.5 2.5 4.9 108 chr3R 6487983 intron CG15186 + chr3R 6488037 intron CG15186 + chr3R 6488091 intron CG15186 + chr3R_17_6485001 chr3R_6485001 RC1_1-HE 1999 chr3R 6510022 6510055 chr3R 6515104 6515137 jockey 13 5082 2.0 2.5 2.2 4.1 5115 chr3R 6510022 intergenic not near genes chr3R 6512580 intergenic not near genes chr3R 6515137 intergenic not near genes chr3R_13_6510001 chr3R_6510001 RC1_1-HE 2000 chr3R 6550323 6550353 chr3R 6550405 6550435 18 82 6.5 8.0 7.2 2.2 112 chr3R 6550323 intron dpr11 - chr3R 6550379 intron dpr11 - chr3R 6550435 intron dpr11 - chr3R_18_6550001 chr3R_6550001 RC1_1-HE 2001 chr3R 6561952 6561982 chr3R 6562037 6562067 6 85 3.5 4.5 4.0 1.2 115 chr3R 6561952 intron dpr11 - chr3R 6562010 intron dpr11 - chr3R 6562067 intron dpr11 - chr3R_6_6560001 chr3R_6560001 RC1_1-HE 2002 chr3R 6571724 6571757 chr3R 6571811 6571844 10 86 2.5 7.5 5.0 1.7 120 chr3R 6571724 intron dpr11 - chr3R 6571784 intron dpr11 - chr3R 6571844 intron dpr11 - chr3R_10_6570001 chr3R_6570001 RC1_1-HE 2003 chr3R 6591333 6591363 chr3R 6591422 6591452 13 88 4.0 1.5 2.8 3.4 119 chr3R 6591333 intron dpr11 - chr3R 6591392 intron dpr11 - chr3R 6591452 intron dpr11 - chr3R_13_6590001 chr3R_6590001 RC1_1-HE 2004 chr3R 6617398 6617426 chr3R 6617495 6617523 23 96 4.5 1.0 2.8 6.1 125 chr3R 6617398 intergenic not near genes chr3R 6617460 intergenic not near genes chr3R 6617523 intergenic not near genes chr3R_23_6615001 chr3R_6615001 RC1_1-HE 2005 chr3R 6624257 6624285 chr3R 6624340 6624368 10 83 2.5 2.5 2.5 2.9 111 chr3R 6624257 intergenic not near genes chr3R 6624312 intergenic not near genes chr3R 6624368 intergenic not near genes chr3R_10_6620001 chr3R_6620001 RC1_1-HE 2006 chr3R 6639908 6639931 chr3R 6639987 6640010 12 79 5.5 0.5 3.0 3.0 102 chr3R 6639908 intergenic not near genes chr3R 6639959 intergenic not near genes chr3R 6640010 intergenic not near genes chr3R_12_6635001 chr3R_6635001 RC1_1-HE 2007 chr3R 6657138 6657168 chr3R 6657219 6657249 11 79 3.0 2.5 2.8 2.9 111 chr3R 6657138 intron CG1307 - chr3R 6657194 exon CG1307 - chr3R 6657249 exon CG1307 - chr3R_11_6655001 chr3R_6655001 RC1_1-HE 2008 chr3R 6663604 6663636 chr3R 6663685 6663717 6 81 0.0 3.5 1.8 2.1 113 chr3R 6663604 intron lab - chr3R 6663660 intron lab - chr3R 6663717 intron lab - chr3R_6_6660001 chr3R_6660001 RC1_1-HE 2009 chr3R 6705683 6705718 chr3R 6705908 6705943 8 225 0.5 0.5 0.5 5.3 260 chr3R 6705683 intergenic not near genes chr3R 6705813 intergenic not near genes chr3R 6705943 intergenic not near genes chr3R_8_6705001 chr3R_6705001 RC1_1-HE 2010 chr3R 6727329 6727366 chr3R 6727450 6727487 26 121 6.0 5.0 5.5 4.0 158 chr3R 6727329 intron pb - chr3R 6727408 intron pb - chr3R 6727487 intron pb - chr3R_26_6725001 chr3R_6725001 RC1_1-HE 2011 chr3R 6737500 6737531 chr3R 6739287 6739319 Doc 15 1788 2.0 5.5 3.8 3.1 1819 chr3R 6737500 intron pb - chr3R 6738410 intron pb - chr3R 6739319 intron pb - chr3R_15_6735001 chr3R_6735001 RC1_1-HE 2012 chr3R 6828028 6828039 chr3R 6828105 6828116 4 77 1.5 2.5 2.0 1.3 88 chr3R 6828028 intron Scr - chr3R 6828072 intron Scr - chr3R 6828116 intron Scr - chr3R_4_6825001 chr3R_6825001 RC1_1-HE 2013 chr3R 6856382 6856400 chr3R 6856500 6856518 6 118 2.5 1.5 2.0 2.0 136 chr3R 6856382 intergenic not near genes chr3R 6856450 intergenic not near genes chr3R 6856518 intergenic not near genes chr3R_6_6855001 chr3R_6855001 RC1_1-HE 2014 chr3R 6862218 6862249 chr3R 6862306 6862337 7 88 2.0 2.5 2.2 2.2 119 chr3R 6862218 intergenic not near genes chr3R 6862278 intergenic not near genes chr3R 6862337 intergenic not near genes chr3R_7_6860001 chr3R_6860001 RC1_1-HE 2015 chr3R 6905760 6905786 chr3R 6905946 6905972 11 186 4.5 2.0 3.2 2.6 212 chr3R 6905760 intron Antp - chr3R 6905866 intron Antp - chr3R 6905972 intron Antp - chr3R_11_6905001 chr3R_6905001 RC1_1-HE 2016 chr3R 6912100 6912130 chr3R 6912212 6912242 16 111 7.0 3.5 5.2 2.6 142 chr3R 6912100 intron Antp - chr3R 6912171 intron Antp - chr3R 6912242 intron Antp - chr3R_16_6910001 chr3R_6910001 RC1_1-HE 2017 chr3R 7021677 7021712 chr3R 7021785 7021820 13 108 3.5 3.5 3.5 2.9 143 chr3R 7021677 intergenic not near genes chr3R 7021748 intergenic not near genes chr3R 7021820 intergenic not near genes chr3R_13_7020001 chr3R_7020001 RC1_1-HE 2018 chr3R 7030704 7030729 chr3R 7030781 7030806 9 77 4.0 4.0 4.0 1.8 102 chr3R 7030704 intergenic not near genes chr3R 7030755 intergenic not near genes chr3R 7030806 intergenic not near genes chr3R_9_7030001 chr3R_7030001 RC1_1-HE 2019 chr3R 7103928 7103960 chr3R 7104028 7104060 24 99 6.0 8.0 7.0 3.0 132 chr3R 7103928 intron Alh - chr3R 7103994 intron Alh - chr3R 7104060 intron Alh - chr3R_24_7100001 chr3R_7100001 RC1_1-HE 2020 chr3R 7106525 7106537 chr3R 7106607 7106619 11 82 5.5 7.0 6.2 1.5 94 chr3R 7106525 intron Alh - chr3R 7106572 intron Alh - chr3R 7106619 intron Alh - chr3R_11_7105001 chr3R_7105001 RC1_1-HE 2021 chr3R 7110485 7110499 chr3R 7110562 7110576 11 77 6.0 5.5 5.8 1.6 91 chr3R 7110485 intron Alh - chr3R 7110530 intron Alh - chr3R 7110576 intron Alh - chr3R_11_7110001 chr3R_7110001 RC1_1-HE 2022 chr3R 7122952 7122976 chr3R 7123107 7123131 6 153 3.0 4.0 3.5 1.3 179 chr3R 7122952 intron Alh - chr3R 7123042 intron Alh - chr3R 7123131 intron Alh - chr3R_6_7120001 chr3R_7120001 RC1_1-HE 2023 chr3R 7173680 7173710 chr3R 7173761 7173791 20 79 7.0 7.0 7.0 2.5 111 chr3R 7173680 intron sas + chr3R 7173736 intron sas + chr3R 7173791 intron sas + chr3R_20_7170001 chr3R_7170001 RC1_1-HE 2024 chr3R 7210609 7210618 chr3R 7210696 7210705 8 87 0.0 14.0 7.0 1.0 96 chr3R 7210609 intergenic not near genes chr3R 7210657 intergenic not near genes chr3R 7210705 intergenic not near genes chr3R_8_7210001 chr3R_7210001 RC1_1-HE 2025 chr3R 7232428 7232459 chr3R 7232508 7232539 20 80 3.5 5.0 4.2 3.8 111 chr3R 7232428 intron CG14608 + chr3R 7232484 intron CG14608 + chr3R 7232539 intron CG14608 + chr3R_20_7230001 chr3R_7230001 RC1_1-HE 2026 chr3R 7320431 7320447 chr3R 7320520 7320536 4 89 3.0 2.5 2.8 1.1 105 chr3R 7320431 intergenic not near genes chr3R 7320484 intergenic not near genes chr3R 7320536 intergenic not near genes chr3R_4_7320001 chr3R_7320001 RC1_1-HE 2027 chr3R 7355468 7355476 chr3R 7355554 7355562 5 86 0.0 5.5 2.8 1.3 94 chr3R 7355468 intergenic not near genes chr3R 7355515 intergenic not near genes chr3R 7355562 intergenic not near genes chr3R_5_7355001 chr3R_7355001 RC1_1-HE 2028 chr3R 7428988 7429022 chr3R 7429077 7429111 12 89 3.0 4.5 3.8 2.5 123 chr3R 7428988 intergenic not near genes chr3R 7429050 intergenic not near genes chr3R 7429111 intergenic not near genes chr3R_12_7425001 chr3R_7425001 RC1_1-HE 2029 chr3R 7438911 7438943 chr3R 7438990 7439022 7 79 3.0 4.5 3.8 1.5 111 chr3R 7438911 intergenic not near genes chr3R 7438966 intergenic not near genes chr3R 7439022 intergenic not near genes chr3R_7_7435001 chr3R_7435001 RC1_1-HE 2030 chr3R 7447996 7448009 chr3R 7448075 7448088 4 79 2.5 3.0 2.8 1.1 92 chr3R 7447996 intergenic not near genes chr3R 7448042 intergenic not near genes chr3R 7448088 intergenic not near genes chr3R_4_7445001 chr3R_7445001 RC1_1-HE 2031 chr3R 7526287 7526323 chr3R 7526370 7526406 11 83 1.0 2.0 1.5 4.4 119 chr3R 7526287 intron alpha-Est6 - chr3R 7526346 intron alpha-Est6 - chr3R 7526406 intron alpha-Est6 - chr3R_11_7525001 chr3R_7525001 RC1_1-HE 2032 chr3R 7527140 7527174 chr3R 7527222 7527256 8 82 3.0 3.5 3.2 1.9 116 chr3R 7527140 intron alpha-Est6 - chr3R 7527198 intron alpha-Est6 - chr3R 7527256 intron alpha-Est6 - chr3R_8_7525001 chr3R_7525001 RC1_1-HE 2033 chr3R 7548612 7548634 chr3R 7548692 7548714 5 80 1.5 4.5 3.0 1.2 102 chr3R 7548612 intron alpha-Est1 - chr3R 7548663 intron alpha-Est1 - chr3R 7548714 intron alpha-Est1 - chr3R_5_7545001 chr3R_7545001 RC1_1-HE 2034 chr3R 7579322 7579358 chr3R 7579563 7579599 14 240 2.0 2.5 2.2 4.4 277 chr3R 7579322 exon CG34127 - chr3R 7579460 intron CG34127 - chr3R 7579599 intron CG34127 - chr3R_14_7575001 chr3R_7575001 RC1_1-HE 2035 chr3R 7620026 7620046 chr3R 7620104 7620124 6 78 5.0 5.0 5.0 1.0 98 chr3R 7620026 intron CG34127 - chr3R 7620075 intron CG34127 - chr3R 7620124 intron CG34127 - chr3R_6_7620001 chr3R_7620001 RC1_1-HE 2036 chr3R 7620049 7620053 chr3R 7620100 7620131 5 69 3.5 4.5 4.0 1.0 82 chr3R 7620049 intron CG34127 - chr3R 7620090 intron CG34127 - chr3R 7620131 intron CG34127 - chr3R_5_7620001 chr3R_7620001 RC1_1-HE 2037 chr3R 7635653 7635678 chr3R 7635737 7635762 9 83 3.0 5.0 4.0 1.8 109 chr3R 7635653 intron CG34127 - chr3R 7635708 intron CG34127 - chr3R 7635762 intron CG34127 - chr3R_9_7635001 chr3R_7635001 RC1_1-HE 2038 chr3R 7677913 7677945 chr3R 7678026 7678057 8 112 3.5 2.0 2.8 2.1 144 chr3R 7677913 intron Nlg1 + chr3R 7677985 intron Nlg1 + chr3R 7678057 intron Nlg1 + chr3R_8_7675001 chr3R_7675001 RC1_1-HE 2039 chr3R 7694576 7694609 chr3R 7713638 7713671 invader3 12 19062 2.5 4.0 3.2 2.9 19095 chr3R 7694576 3` UTR Nlg1 + chr3R 7704124 intergenic not near genes chr3R 7713671 intergenic not near genes chr3R_12_7700001 chr3R_7700001 RC1_1-HE 2040 chr3R 7729465 7729498 chr3R 7737404 7737437 Stalker2 13 7938 4.5 10.0 7.2 1.6 7972 chr3R 7729465 intergenic not near genes chr3R 7733451 intergenic not near genes chr3R 7737437 intergenic not near genes chr3R_13_7730001 chr3R_7730001 RC1_1-HE 2041 chr3R 7838110 7838143 chr3R 7838189 7838222 11 79 3.0 4.0 3.5 2.4 112 chr3R 7838110 intron CG34384 + chr3R 7838166 intron CG34384 + chr3R 7838222 intron CG34384 + chr3R_11_7835001 chr3R_7835001 RC1_1-HE 2042 chr3R 7849641 7849669 chr3R 7850809 7850837 1360 7 1168 1.0 3.5 2.2 2.2 1196 chr3R 7849641 intron CG34384 + chr3R 7850239 intron CG34384 + chr3R 7850837 intron CG34384 + chr3R_7_7850001 chr3R_7850001 RC1_1-HE 2043 chr3R 7973314 7973344 chr3R 7974377 7974407 1360 13 1063 5.5 4.0 4.8 2.2 1093 chr3R 7973314 intergenic not near genes chr3R 7973860 intergenic not near genes chr3R 7974407 intergenic CD98hc - chr3R_13_7970001 chr3R_7970001 RC1_1-HE 2044 chr3R 8028034 8028065 chr3R 8028112 8028143 7 78 1.5 2.0 1.8 2.5 109 chr3R 8028034 intron CG2747 - chr3R 8028088 intron CG2747 - chr3R 8028143 intron CG2747 - chr3R_7_8025001 chr3R_8025001 RC1_1-HE 2045 chr3R 8075563 8075593 chr3R 8075648 8075657 13 83 2.5 2.5 2.5 3.7 94 chr3R 8075563 intron mAChR-B + chr3R 8075610 intron mAChR-B + chr3R 8075657 intron,5` UTR mAChR-B +,snoRNA:Me18S-G423 + chr3R_13_8075001 chr3R_8075001 RC1_1-HE 2046 chr3R 8090269 8090300 chr3R 8090447 8090478 12 178 4.5 6.5 5.5 1.8 209 chr3R 8090269 5` UTR CR44330 + chr3R 8090374 intergenic CR44330 + chr3R 8090478 intergenic CR44330 + chr3R_12_8090001 chr3R_8090001 RC1_1-HE 2047 chr3R 8090564 8090571 chr3R 8094042 8094049 297 5 3478 5.0 12.5 8.8 0.5 3485 chr3R 8090564 intergenic CR44330 + chr3R 8092306 intergenic not near genes chr3R 8094049 intergenic CG7900 + chr3R_5_8090001 chr3R_8090001 RC1_1-HE 2048 chr3R 8094406 8094441 chr3R 8099712 8099747 Transpac 15 5306 4.0 3.5 3.8 3.1 5341 chr3R 8094406 intron CG7900 + chr3R 8097076 intron CG7900 + chr3R 8099747 intron CG7900 + chr3R_15_8095001 chr3R_8095001 RC1_1-HE 2049 chr3R 8101762 8101791 chr3R 8104847 8104876 G2 15 3085 8.0 4.0 6.0 2.1 3114 chr3R 8101762 exon CG7900 + chr3R 8103319 intron CG7900 + chr3R 8104876 3` UTR CG7900 + chr3R_15_8100001 chr3R_8100001 RC1_1-HE 2050 chr3R 8158036 8158048 chr3R 8158119 8158131 7 83 5.0 5.5 5.2 1.1 95 chr3R 8158036 intron grn - chr3R 8158084 intron grn - chr3R 8158131 intron grn - chr3R_7_8155001 chr3R_8155001 RC1_1-HE 2051 chr3R 8207564 8207585 chr3R 8208410 8208431 F-element 4 846 1.5 5.0 3.2 1.0 867 chr3R 8207564 intergenic not near genes chr3R 8207998 intergenic not near genes chr3R 8208431 intergenic not near genes chr3R_4_8205001 chr3R_8205001 RC1_1-HE 2052 chr3R 8231300 8231337 chr3R 8231385 8231414 7 84 1.5 1.0 1.2 3.2 114 chr3R 8231300 3` UTR CR45551 - chr3R 8231357 3` UTR CR45551 - chr3R 8231414 3` UTR CR45551 - chr3R_7_8230001 chr3R_8230001 RC1_1-HE 2053 chr3R 8403004 8403041 chr3R 8412171 8412208 roo 39 9167 9.5 10.0 9.8 3.6 9204 chr3R 8403004 intron CG45263 - chr3R 8407606 intron CG45263 - chr3R 8412208 intron CG45263 - chr3R_39_8405001 chr3R_8405001 RC1_1-HE 2054 chr3R 8424716 8424747 chr3R 8424853 8424884 5 137 4.0 2.5 3.2 1.2 168 chr3R 8424716 intron CG45263 - chr3R 8424800 intron CG45263 - chr3R 8424884 intron CG45263 - chr3R_5_8420001 chr3R_8420001 RC1_1-HE 2055 chr3R 8434364 8434396 chr3R 8434457 8434489 17 93 5.0 6.0 5.5 2.6 125 chr3R 8434364 intron CG45263 - chr3R 8434426 intron CG45263 - chr3R 8434489 intron CG45263 - chr3R_17_8430001 chr3R_8430001 RC1_1-HE 2056 chr3R 8535642 8535666 chr3R 8535727 8535751 6 85 2.5 2.5 2.5 1.7 109 chr3R 8535642 intergenic not near genes chr3R 8535696 intergenic not near genes chr3R 8535751 intergenic not near genes chr3R_6_8535001 chr3R_8535001 RC1_1-HE 2057 chr3R 8552365 8552401 chr3R 8552446 8552482 13 76 2.0 3.5 2.8 3.4 117 chr3R 8552365 intergenic Or85d + chr3R 8552424 intergenic Or85d + chr3R 8552482 intergenic Or85d + chr3R_13_8550001 chr3R_8550001 RC1_1-HE 2058 chr3R 8570478 8570505 chr3R 8575115 8575142 HMS-Beagle 5 4637 3.5 1.5 2.5 1.4 4664 chr3R 8570478 intergenic not near genes chr3R 8572810 intergenic not near genes chr3R 8575142 intergenic not near genes chr3R_5_8570001 chr3R_8570001 RC1_1-HE 2059 chr3R 8581049 8581082 chr3R 8581147 8581180 15 97 2.5 0.0 1.2 6.8 131 chr3R 8581049 intron 5-HT2B + chr3R 8581114 intron 5-HT2B + chr3R 8581180 intron 5-HT2B + chr3R_15_8580001 chr3R_8580001 RC1_1-HE 2060 chr3R 8598256 8598281 chr3R 8598463 8598488 11 207 4.5 10.0 7.2 1.3 232 chr3R 8598256 intron 5-HT2B + chr3R 8598372 intron 5-HT2B + chr3R 8598488 intron 5-HT2B + chr3R_11_8595001 chr3R_8595001 RC1_1-HE 2061 chr3R 8601772 8601797 chr3R 8610920 8610951 roo 17 9154 6.0 4.0 5.0 2.8 9179 chr3R 8601772 intron 5-HT2B + chr3R 8606362 intron 5-HT2B + chr3R 8610951 intron 5-HT2B + chr3R_17_8605001 chr3R_8605001 RC1_1-HE 2062 chr3R 8645462 8645486 chr3R 8645539 8645563 10 77 2.0 2.0 2.0 3.3 101 chr3R 8645462 5` UTR Cyp313b1 - chr3R 8645512 intron Cyp313b1 - chr3R 8645563 intron Cyp313b1 - chr3R_10_8645001 chr3R_8645001 RC1_1-HE 2063 chr3R 8707359 8707379 chr3R 8709801 8709821 jockey 13 2442 8.0 11.5 9.8 1.2 2462 chr3R 8707359 intergenic not near genes chr3R 8708590 intergenic not near genes chr3R 8709821 intergenic not near genes chr3R_13_8705001 chr3R_8705001 RC1_1-HE 2064 chr3R 8707380 8707384 chr3R 8709797 8709826 jockey 7 2438 6.5 11.0 8.8 0.7 2446 chr3R 8707380 intergenic not near genes chr3R 8708603 intergenic not near genes chr3R 8709826 intergenic not near genes chr3R_7_8705001 chr3R_8705001 RC1_1-HE 2065 chr3R 8756287 8756321 chr3R 8756364 8756398 11 77 2.5 5.0 3.8 2.3 111 chr3R 8756287 intron,intron CG11768 -,CG34135 - chr3R 8756342 intron,intron CG11768 -,CG34135 - chr3R 8756398 intron,intron CG11768 -,CG34135 - chr3R_11_8755001 chr3R_8755001 RC1_1-HE 2066 chr3R 8859262 8859289 chr3R 8859378 8859405 13 116 3.0 4.5 3.8 2.7 143 chr3R 8859262 intron pyd - chr3R 8859334 intron pyd - chr3R 8859405 intron pyd - chr3R_13_8855001 chr3R_8855001 RC1_1-HE 2067 chr3R 8894867 8894906 chr3R 8896024 8896063 1360 17 1157 4.5 4.0 4.2 3.3 1196 chr3R 8894867 intron pyd - chr3R 8895465 intron pyd - chr3R 8896063 intron pyd - chr3R_17_8895001 chr3R_8895001 RC1_1-HE 2068 chr3R 8938973 8938999 chr3R 8939061 8939087 16 88 11.5 6.0 8.8 1.6 114 chr3R 8938973 intron skap + chr3R 8939030 intron skap + chr3R 8939087 intron skap + chr3R_16_8935001 chr3R_8935001 RC1_1-HE 2069 chr3R 9069487 9069519 chr3R 9069567 9069599 18 80 7.5 4.0 5.8 2.6 112 chr3R 9069487 3` UTR pum - chr3R 9069543 3` UTR pum - chr3R 9069599 3` UTR pum - chr3R_18_9065001 chr3R_9065001 RC1_1-HE 2070 chr3R 9070477 9070510 chr3R 9070567 9070600 21 90 6.0 4.5 5.2 3.4 123 chr3R 9070477 3` UTR pum - chr3R 9070538 3` UTR pum - chr3R 9070600 3` UTR pum - chr3R_21_9070001 chr3R_9070001 RC1_1-HE 2071 chr3R 9083140 9083175 chr3R 9083226 9083261 25 85 3.5 10.5 7.0 3.1 121 chr3R 9083140 intron pum - chr3R 9083200 intron pum - chr3R 9083261 intron pum - chr3R_25_9080001 chr3R_9080001 RC1_1-HE 2072 chr3R 9101844 9101872 chr3R 9101943 9101971 6 99 4.0 6.0 5.0 1.0 127 chr3R 9101844 intron pum - chr3R 9101908 intron pum - chr3R 9101971 intron pum - chr3R_6_9100001 chr3R_9100001 RC1_1-HE 2073 chr3R 9107458 9107494 chr3R 9107563 9107599 24 105 6.0 6.5 6.2 3.3 141 chr3R 9107458 intron pum - chr3R 9107528 intron pum - chr3R 9107599 intron pum - chr3R_24_9105001 chr3R_9105001 RC1_1-HE 2074 chr3R 9108863 9108884 chr3R 9108940 9108961 10 77 9.5 3.5 6.5 1.3 98 chr3R 9108863 intron pum - chr3R 9108912 intron pum - chr3R 9108961 intron pum - chr3R_10_9105001 chr3R_9105001 RC1_1-HE 2075 chr3R 9141143 9141173 chr3R 9141228 9141253 17 83 5.0 11.5 8.2 1.8 110 chr3R 9141143 intron pum - chr3R 9141198 intron pum - chr3R 9141253 intron pum - chr3R_17_9140001 chr3R_9140001 RC1_1-HE 2076 chr3R 9278781 9278810 chr3R 9284042 9284071 Rt1a 10 5261 6.5 5.0 5.8 1.5 5290 chr3R 9278781 intergenic not near genes chr3R 9281426 intergenic not near genes chr3R 9284071 intergenic not near genes chr3R_10_9280001 chr3R_9280001 RC1_1-HE 2077 chr3R 9304531 9304539 chr3R 9311819 9311827 Stalker4 5 7288 11.5 4.0 7.8 0.6 7296 chr3R 9304531 intron CG8861 - chr3R 9308179 intron CG8861 - chr3R 9311827 intron CG8861 - chr3R_5_9305001 chr3R_9305001 RC1_1-HE 2078 chr3R 9313423 9313451 chr3R 9313550 9313578 10 127 6.5 4.0 5.2 1.6 155 chr3R 9313423 intron CG8861 - chr3R 9313500 intron CG8861 - chr3R 9313578 intron CG8861 - chr3R_10_9310001 chr3R_9310001 RC1_1-HE 2079 chr3R 9317410 9317447 chr3R 9317494 9317530 11 84 6.0 2.0 4.0 2.2 120 chr3R 9317410 intron CG8861 - chr3R 9317470 intron CG8861 - chr3R 9317530 intron CG8861 - chr3R_11_9315001 chr3R_9315001 RC1_1-HE 2080 chr3R 9319578 9319607 chr3R 9320014 9320043 jockey 15 436 5.0 7.0 6.0 2.1 465 chr3R 9319578 intron CG8861 - chr3R 9319810 intron CG8861 - chr3R 9320043 intron CG8861 - chr3R_15_9315001 chr3R_9315001 RC1_1-HE 2081 chr3R 9348857 9348873 chr3R 9348939 9348955 4 82 0.5 7.5 4.0 0.8 98 chr3R 9348857 intron CG45050 + chr3R 9348906 intron CG45050 + chr3R 9348955 intron CG45050 + chr3R_4_9345001 chr3R_9345001 RC1_1-HE 2082 chr3R 9361815 9361844 chr3R 9362057 9362086 pogo 12 242 1.0 3.0 2.0 4.0 271 chr3R 9361815 3` UTR CG45050 + chr3R 9361950 3` UTR CG45050 + chr3R 9362086 3` UTR CG45050 + chr3R_12_9360001 chr3R_9360001 RC1_1-HE 2083 chr3R 9391669 9391673 chr3R 9391752 9391756 5 83 4.5 11.0 7.8 0.6 87 chr3R 9391669 intron FER - chr3R 9391712 intron FER - chr3R 9391756 intron FER - chr3R_5_9390001 chr3R_9390001 RC1_1-HE 2084 chr3R 9496536 9496567 chr3R 9497407 9497437 19 872 39.5 37.0 38.2 0.5 901 chr3R 9496536 exon CG8147 + chr3R 9496986 intergenic RhoL -,CG8147 + chr3R 9497437 exon RhoL - chr3R_19_9495001 chr3R_9495001 RC1_1-HE 2085 chr3R 9503654 9503691 chr3R 9503732 9503769 22 78 5.5 7.5 6.5 2.9 115 chr3R 9503654 intergenic not near genes chr3R 9503712 intergenic not near genes chr3R 9503769 intergenic not near genes chr3R_22_9500001 chr3R_9500001 RC1_1-HE 2086 chr3R 9620176 9620202 chr3R 9620307 9620333 17 130 3.0 2.0 2.5 4.9 157 chr3R 9620176 intron CG8312 + chr3R 9620254 intron CG8312 + chr3R 9620333 intron CG8312 + chr3R_17_9620001 chr3R_9620001 RC1_1-HE 2087 chr3R 9699971 9700001 chr3R 9700061 9700091 1360 15 89 9.0 6.5 7.8 1.7 120 chr3R 9699971 intron Unc-115a - chr3R 9700031 intron Unc-115a - chr3R 9700091 intron Unc-115a - chr3R_15_9700001 chr3R_9700001 RC1_1-HE 2088 chr3R 9783942 9783973 chr3R 9784027 9784059 11 86 2.5 6.5 4.5 2.0 117 chr3R 9783942 exon MtnA - chr3R 9784000 intron MtnA - chr3R 9784059 intron MtnA - chr3R_11_9780001 chr3R_9780001 RC1_1-HE 2089 chr3R 9905387 9905395 chr3R 9905512 9905520 10 125 6.5 0.0 3.2 2.4 133 chr3R 9905387 intron Glut4EF + chr3R 9905454 intron Glut4EF + chr3R 9905520 intron Glut4EF + chr3R_10_9905001 chr3R_9905001 RC1_1-HE 2090 chr3R 10138658 10138693 chr3R 10138744 10138779 13 86 3.0 5.5 4.2 2.5 121 chr3R 10138658 intron tws - chr3R 10138718 intron tws - chr3R 10138779 intron tws - chr3R_13_10135001 chr3R_10135001 RC1_1-HE 2091 chr3R 10231780 10231814 chr3R 10237358 10237392 mdg3 13 5578 2.5 4.0 3.2 3.1 5612 chr3R 10231780 intron CG42795 + chr3R 10234586 intron CG42795 + chr3R 10237392 intron CG42795 + chr3R_13_10230001 chr3R_10230001 RC1_1-HE 2092 chr3R 10417862 10417886 chr3R 10417965 10417989 12 102 1.5 4.0 2.8 3.2 127 chr3R 10417862 intergenic not near genes chr3R 10417926 intergenic not near genes chr3R 10417989 intergenic not near genes chr3R_12_10415001 chr3R_10415001 RC1_1-HE 2093 chr3R 10531868 10531896 chr3R 10531950 10531978 17 82 1.0 2.0 1.5 6.8 110 chr3R 10531868 intron hth - chr3R 10531923 intron hth - chr3R 10531978 intron hth - chr3R_17_10530001 chr3R_10530001 RC1_1-HE 2094 chr3R 10619229 10619260 chr3R 10619313 10619344 11 82 8.0 5.5 6.8 1.4 115 chr3R 10619229 intergenic not near genes chr3R 10619286 intergenic not near genes chr3R 10619344 intergenic not near genes chr3R_11_10615001 chr3R_10615001 RC1_1-HE 2095 chr3R 10746707 10746741 chr3R 10746787 10746821 20 80 5.5 3.0 4.2 3.8 114 chr3R 10746707 intron TkR86C - chr3R 10746764 intron TkR86C - chr3R 10746821 intron TkR86C - chr3R_20_10745001 chr3R_10745001 RC1_1-HE 2096 chr3R 10804185 10804207 chr3R 10811718 10811739 17.6 10 7533 0.5 2.0 1.2 4.5 7554 chr3R 10804185 intergenic CG14692 - chr3R 10807962 intergenic not near genes chr3R 10811739 3` UTR CG14693 - chr3R_10_10805001 chr3R_10805001 RC1_1-HE 2097 chr3R 10868589 10868625 chr3R 10868668 10868704 11 77 2.5 1.0 1.8 3.9 115 chr3R 10868589 5` UTR SelR - chr3R 10868646 intergenic SelR -,Tsp86D + chr3R 10868704 intergenic Tsp86D +,SelR - chr3R_11_10865001 chr3R_10865001 RC1_1-HE 2098 chr3R 10937849 10937860 chr3R 10937936 10937942 6 86 14.0 0.5 7.2 0.7 93 chr3R 10937849 intergenic not near genes chr3R 10937896 intergenic not near genes chr3R 10937942 intergenic not near genes chr3R_6_10935001 chr3R_10935001 RC1_1-HE 2099 chr3R 10942217 10942248 chr3R 10942300 10942331 14 82 3.0 7.5 5.2 2.3 114 chr3R 10942217 intergenic not near genes chr3R 10942274 intergenic not near genes chr3R 10942331 intergenic not near genes chr3R_14_10940001 chr3R_10940001 RC1_1-HE 2100 chr3R 10981473 10981508 chr3R 10981588 10981623 15 115 2.5 5.0 3.8 3.1 150 chr3R 10981473 intron CG34114 + chr3R 10981548 intron CG34114 + chr3R 10981623 intron CG34114 + chr3R_15_10980001 chr3R_10980001 RC1_1-HE 2101 chr3R 11016949 11016984 chr3R 11017043 11017078 11 94 1.0 3.5 2.2 3.4 129 chr3R 11016949 intron CG34114 + chr3R 11017014 intron CG34114 + chr3R 11017078 intron CG34114 + chr3R_11_11015001 chr3R_11015001 RC1_1-HE 2102 chr3R 11024184 11024213 chr3R 11024270 11024273 20 94 5.5 3.5 4.5 3.6 89 chr3R 11024184 intron CG34114 + chr3R 11024228 intron CG34114 + chr3R 11024273 intron CG34114 + chr3R_20_11020001 chr3R_11020001 RC1_1-HE 2103 chr3R 11035210 11035244 chr3R 11035297 11035332 4 88 1.0 4.0 2.5 1.1 122 chr3R 11035210 intron CG34114 + chr3R 11035271 intron CG34114 + chr3R 11035332 intron CG34114 + chr3R_4_11035001 chr3R_11035001 RC1_1-HE 2104 chr3R 11065587 11065613 chr3R 11071244 11071246 297 5 5651 3.0 2.0 2.5 1.4 5659 chr3R 11065587 intergenic not near genes chr3R 11068416 intergenic not near genes chr3R 11071246 intergenic not near genes chr3R_5_11065001 chr3R_11065001 RC1_1-HE 2105 chr3R 11078946 11078980 chr3R 11079027 11079061 29 81 2.0 7.0 4.5 5.3 115 chr3R 11078946 intergenic not near genes chr3R 11079004 intergenic not near genes chr3R 11079061 intergenic not near genes chr3R_29_11075001 chr3R_11075001 RC1_1-HE 2106 chr3R 11085458 11085492 chr3R 11085536 11085570 19 78 0.0 2.5 1.2 8.6 112 chr3R 11085458 3` UTR CR44940 - chr3R 11085514 intergenic CR44940 - chr3R 11085570 intergenic CR44940 - chr3R_19_11085001 chr3R_11085001 RC1_1-HE 2107 chr3R 11102323 11102354 chr3R 11102405 11102436 20 80 6.5 8.0 7.2 2.4 113 chr3R 11102323 intergenic not near genes chr3R 11102380 intergenic not near genes chr3R 11102436 intergenic not near genes chr3R_20_11100001 chr3R_11100001 RC1_1-HE 2108 chr3R 11103168 11103181 chr3R 11103251 11103264 7 83 0.0 0.0 0.0 7.0 96 chr3R 11103168 intergenic not near genes chr3R 11103216 intergenic not near genes chr3R 11103264 intergenic not near genes chr3R_7_11100001 chr3R_11100001 RC1_1-HE 2109 chr3R 11104269 11104279 chr3R 11104349 11104359 6 80 6.0 0.0 3.0 1.5 90 chr3R 11104269 intergenic not near genes chr3R 11104314 intergenic not near genes chr3R 11104359 intergenic not near genes chr3R_6_11100001 chr3R_11100001 RC1_1-HE 2110 chr3R 11116458 11116481 chr3R 11116532 11116565 14 82 3.0 7.0 5.0 2.3 107 chr3R 11116458 intergenic not near genes chr3R 11116512 intergenic not near genes chr3R 11116565 intergenic not near genes chr3R_14_11115001 chr3R_11115001 RC1_1-HE 2111 chr3R 11126245 11126272 chr3R 11126351 11126378 17 105 2.0 2.5 2.2 5.3 133 chr3R 11126245 intergenic Ugt86Dd - chr3R 11126312 intergenic Ugt86Dd - chr3R 11126378 intergenic Ugt86Dd - chr3R_17_11125001 chr3R_11125001 RC1_1-HE 2112 chr3R 11139712 11139747 chr3R 11139799 11139802 19 85 3.0 8.5 5.8 2.8 90 chr3R 11139712 3` UTR CG4706 + chr3R 11139757 intergenic CG4706 + chr3R 11139802 intergenic CG4706 + chr3R_19_11135001 chr3R_11135001 RC1_1-HE 2113 chr3R 11174605 11174614 chr3R 11175320 11175329 8 715 13.5 19.0 16.2 0.5 724 chr3R 11174605 exon Ugt86Dj - chr3R 11174967 intron Ugt86Dj - chr3R 11175329 exon Ugt86Dj - chr3R_8_11170001 chr3R_11170001 RC1_1-HE 2114 chr3R 11206039 11206076 chr3R 11206276 11206313 14 237 1.5 3.5 2.5 4.0 274 chr3R 11206039 intron cu + chr3R 11206176 intron cu + chr3R 11206313 intron cu + chr3R_14_11205001 chr3R_11205001 RC1_1-HE 2115 chr3R 11263399 11263432 chr3R 11263484 11263517 12 85 1.0 3.5 2.2 3.8 118 chr3R 11263399 intergenic not near genes chr3R 11263458 intergenic not near genes chr3R 11263517 intergenic not near genes chr3R_12_11260001 chr3R_11260001 RC1_1-HE 2116 chr3R 11269445 11269478 chr3R 11269571 11269604 8 126 1.5 1.0 1.2 3.6 159 chr3R 11269445 3` UTR CR31386 - chr3R 11269524 3` UTR CR31386 - chr3R 11269604 3` UTR CR31386 - chr3R_8_11265001 chr3R_11265001 RC1_1-HE 2117 chr3R 11284699 11284733 chr3R 11284783 11284817 16 84 5.0 4.0 4.5 2.9 118 chr3R 11284699 intron CR31386 - chr3R 11284758 intron CR31386 - chr3R 11284817 intron CR31386 - chr3R_16_11280001 chr3R_11280001 RC1_1-HE 2118 chr3R 11306225 11306257 chr3R 11306312 11306344 19 87 8.5 8.0 8.2 2.1 119 chr3R 11306225 intergenic not near genes chr3R 11306284 intergenic not near genes chr3R 11306344 intergenic not near genes chr3R_19_11305001 chr3R_11305001 RC1_1-HE 2119 chr3R 11332950 11332978 chr3R 11333021 11333042 10 77 5.5 6.0 5.8 1.5 92 chr3R 11332950 intron pros + chr3R 11332996 intron pros + chr3R 11333042 intron pros + chr3R_10_11330001 chr3R_11330001 RC1_1-HE 2120 chr3R 11379235 11379266 chr3R 11388391 11388422 roo 21 9156 6.5 6.5 6.5 2.8 9187 chr3R 11379235 intron pros + chr3R 11383828 intron pros + chr3R 11388422 intron pros + chr3R_21_11380001 chr3R_11380001 RC1_1-HE 2121 chr3R 11527126 11527160 chr3R 11527380 11527414 25 253 7.0 8.5 7.8 2.8 288 chr3R 11527126 intergenic not near genes chr3R 11527270 intergenic not near genes chr3R 11527414 intergenic not near genes chr3R_25_11525001 chr3R_11525001 RC1_1-HE 2122 chr3R 11595684 11595696 chr3R 11595791 11595803 6 107 15.0 1.0 8.0 0.7 119 chr3R 11595684 intron Jupiter - chr3R 11595744 intron Jupiter - chr3R 11595803 intron Jupiter - chr3R_6_11595001 chr3R_11595001 RC1_1-HE 2123 chr3R 11658273 11658292 chr3R 11658710 11658729 14 437 7.0 5.5 6.2 1.9 456 chr3R 11658273 intron CG42327 + chr3R 11658501 intron CG42327 + chr3R 11658729 intron CG42327 + chr3R_14_11655001 chr3R_11655001 RC1_1-HE 2124 chr3R 11689721 11689752 chr3R 11689804 11689835 5 82 3.0 1.5 2.2 1.6 114 chr3R 11689721 intron CG6908 - chr3R 11689778 exon CG6908 - chr3R 11689835 exon CG6908 - chr3R_5_11685001 chr3R_11685001 RC1_1-HE 2125 chr3R 11708630 11708657 chr3R 11708839 11708866 15 209 8.5 5.0 6.8 1.9 236 chr3R 11708630 intergenic not near genes chr3R 11708748 intergenic not near genes chr3R 11708866 intergenic not near genes chr3R_15_11705001 chr3R_11705001 RC1_1-HE 2126 chr3R 11710207 11710237 chr3R 11710286 11710316 18 79 6.0 7.5 6.8 2.3 109 chr3R 11710207 intergenic not near genes chr3R 11710262 intergenic not near genes chr3R 11710316 intergenic not near genes chr3R_18_11710001 chr3R_11710001 RC1_1-HE 2127 chr3R 11840058 11840084 chr3R 11840156 11840182 15 98 9.5 1.5 5.5 2.3 124 chr3R 11840058 intron CG6959 - chr3R 11840120 intron CG6959 - chr3R 11840182 intron CG6959 - chr3R_15_11840001 chr3R_11840001 RC1_1-HE 2128 chr3R 11841058 11841094 chr3R 11846250 11846286 BS 16 5191 7.0 3.5 5.2 2.6 5228 chr3R 11841058 intron CG6959 - chr3R 11843672 intron CG6959 - chr3R 11846286 intron CG6959 - chr3R_16_11840001 chr3R_11840001 RC1_1-HE 2129 chr3R 11853766 11853802 chr3R 11853872 11853908 22 106 7.0 5.0 6.0 3.1 142 chr3R 11853766 intron CG6959 - chr3R 11853837 intron CG6959 - chr3R 11853908 intron CG6959 - chr3R_22_11850001 chr3R_11850001 RC1_1-HE 2130 chr3R 11904807 11904843 chr3R 11905346 11905382 16 537 5.5 3.5 4.5 2.9 575 chr3R 11904807 intron Cad87A - chr3R 11905094 intron Cad87A - chr3R 11905382 intron Cad87A - chr3R_16_11905001 chr3R_11905001 RC1_1-HE 2131 chr3R 11909356 11909393 chr3R 11909437 11909474 26 80 8.0 6.0 7.0 3.2 118 chr3R 11909356 intron Cad87A - chr3R 11909415 intron Cad87A - chr3R 11909474 intron Cad87A - chr3R_26_11905001 chr3R_11905001 RC1_1-HE 2132 chr3R 12022883 12022916 chr3R 12025061 12025094 pogo 6 2178 3.0 3.5 3.2 1.4 2211 chr3R 12022883 intergenic not near genes chr3R 12023988 intergenic not near genes chr3R 12025094 intergenic not near genes chr3R_6_12020001 chr3R_12020001 RC1_1-HE 2133 chr3R 12056051 12056084 chr3R 12056407 12056440 19 354 3.5 4.0 3.8 4.0 389 chr3R 12056051 intergenic not near genes chr3R 12056246 intergenic not near genes chr3R 12056440 intergenic not near genes chr3R_19_12055001 chr3R_12055001 RC1_1-HE 2134 chr3R 12060444 12060475 chr3R 12060678 12060709 17 234 3.5 4.0 3.8 3.5 265 chr3R 12060444 intergenic not near genes chr3R 12060576 intergenic CG14740 - chr3R 12060709 intergenic CG14740 - chr3R_17_12060001 chr3R_12060001 RC1_1-HE 2135 chr3R 12111683 12111700 chr3R 12111779 12111796 11 96 1.0 6.5 3.8 2.3 113 chr3R 12111683 intergenic dpr17 + chr3R 12111740 intergenic dpr17 + chr3R 12111796 intergenic dpr17 + chr3R_11_12110001 chr3R_12110001 RC1_1-HE 2136 chr3R 12214343 12214370 chr3R 12214435 12214462 15 92 4.0 2.0 3.0 3.8 119 chr3R 12214343 3` UTR CG4848 - chr3R 12214402 3` UTR CG4848 - chr3R 12214462 3` UTR CG4848 - chr3R_15_12210001 chr3R_12210001 RC1_1-HE 2137 chr3R 12247148 12247173 chr3R 12247234 12247259 8 86 3.0 4.0 3.5 1.8 111 chr3R 12247148 intergenic not near genes chr3R 12247204 intergenic not near genes chr3R 12247259 intergenic not near genes chr3R_8_12245001 chr3R_12245001 RC1_1-HE 2138 chr3R 12365717 12365743 chr3R 12365798 12365824 12 81 3.5 4.0 3.8 2.5 107 chr3R 12365717 5` UTR GstD10 - chr3R 12365770 intergenic GstD10 -,GstD9 - chr3R 12365824 intergenic GstD10 -,GstD9 - chr3R_12_12365001 chr3R_12365001 RC1_1-HE 2139 chr3R 12398602 12398629 chr3R 12405596 12405603 4 6978 14.0 5.5 9.8 0.4 7001 chr3R 12398602 intron CG34402 + chr3R 12402102 exon CG34402 + chr3R 12405603 intron Cyp9f2 - chr3R_4_12400001 chr3R_12400001 RC1_1-HE 2140 chr3R 12522350 12522384 chr3R 12522437 12522471 15 87 3.5 1.5 2.5 4.3 121 chr3R 12522350 5` UTR Octbeta3R - chr3R 12522410 5` UTR Octbeta3R - chr3R 12522471 5` UTR Octbeta3R - chr3R_15_12520001 chr3R_12520001 RC1_1-HE 2141 chr3R 12543619 12543628 chr3R 12543710 12543719 4 91 3.5 8.0 5.8 0.6 100 chr3R 12543619 intron Octbeta3R - chr3R 12543669 intron Octbeta3R - chr3R 12543719 intron Octbeta3R - chr3R_4_12540001 chr3R_12540001 RC1_1-HE 2142 chr3R 12586709 12586736 chr3R 12586786 12586814 15 78 3.0 8.0 5.5 2.3 105 chr3R 12586709 intron Octbeta2R - chr3R 12586762 intron Octbeta2R - chr3R 12586814 intron Octbeta2R - chr3R_15_12585001 chr3R_12585001 RC1_1-HE 2143 chr3R 12600449 12600475 chr3R 12600539 12600566 11 91 2.0 4.0 3.0 2.8 117 chr3R 12600449 intergenic not near genes chr3R 12600508 intergenic not near genes chr3R 12600566 intergenic not near genes chr3R_11_12600001 chr3R_12600001 RC1_1-HE 2144 chr3R 12602407 12602417 chr3R 12602486 12602496 4 79 3.5 5.0 4.2 0.8 89 chr3R 12602407 intergenic not near genes chr3R 12602452 intergenic not near genes chr3R 12602496 intergenic not near genes chr3R_4_12600001 chr3R_12600001 RC1_1-HE 2145 chr3R 12669545 12669575 chr3R 12669632 12669662 6 87 4.5 1.0 2.8 1.6 117 chr3R 12669545 intron CG14395 + chr3R 12669604 intron CG14395 + chr3R 12669662 intron CG14395 + chr3R_6_12665001 chr3R_12665001 RC1_1-HE 2146 chr3R 12743494 12743515 chr3R 12743606 12743633 8 116 4.0 2.5 3.2 1.9 139 chr3R 12743494 exon CG5999 - chr3R 12743564 exon CG5999 - chr3R 12743633 exon CG5999 - chr3R_8_12740001 chr3R_12740001 RC1_1-HE 2147 chr3R 12763139 12763147 chr3R 12763217 12763225 4 78 2.5 2.0 2.2 1.2 86 chr3R 12763139 intron beat-Vc - chr3R 12763182 intron beat-Vc - chr3R 12763225 intron beat-Vc - chr3R_4_12760001 chr3R_12760001 RC1_1-HE 2148 chr3R 12813108 12813134 chr3R 12813479 12813504 12 371 3.5 2.5 3.0 3.0 396 chr3R 12813108 intron CG31345 - chr3R 12813306 intron CG31345 - chr3R 12813504 intron CG31345 - chr3R_12_12810001 chr3R_12810001 RC1_1-HE 2149 chr3R 12819026 12819043 chr3R 12819110 12819127 9 84 4.0 1.5 2.8 2.4 101 chr3R 12819026 intergenic not near genes chr3R 12819076 intergenic not near genes chr3R 12819127 intergenic not near genes chr3R_9_12815001 chr3R_12815001 RC1_1-HE 2150 chr3R 12902381 12902413 chr3R 12902463 12902495 11 82 3.5 0.5 2.0 3.7 114 chr3R 12902381 intergenic not near genes chr3R 12902438 intergenic not near genes chr3R 12902495 intergenic not near genes chr3R_11_12900001 chr3R_12900001 RC1_1-HE 2151 chr3R 12915743 12915780 chr3R 12915833 12915870 13 90 2.0 4.0 3.0 3.2 127 chr3R 12915743 intergenic beat-Vb + chr3R 12915806 intergenic beat-Vb + chr3R 12915870 intergenic beat-Vb + chr3R_13_12915001 chr3R_12915001 RC1_1-HE 2152 chr3R 12920151 12920184 chr3R 12925355 12925373 copia 22 5200 6.5 6.5 6.5 2.9 5222 chr3R 12920151 intron beat-Vb + chr3R 12922762 intron beat-Vb + chr3R 12925373 intron beat-Vb + chr3R_22_12920001 chr3R_12920001 RC1_1-HE 2153 chr3R 12943976 12944009 chr3R 12944064 12944097 9 87 4.0 6.0 5.0 1.5 121 chr3R 12943976 intergenic not near genes chr3R 12944036 intergenic not near genes chr3R 12944097 intergenic not near genes chr3R_9_12940001 chr3R_12940001 RC1_1-HE 2154 chr3R 12944559 12944579 chr3R 12944643 12944663 5 84 2.0 3.5 2.8 1.3 104 chr3R 12944559 intergenic not near genes chr3R 12944611 intergenic not near genes chr3R 12944663 intergenic not near genes chr3R_5_12940001 chr3R_12940001 RC1_1-HE 2155 chr3R 12965630 12965659 chr3R 12965709 12965738 18 79 7.5 5.5 6.5 2.4 108 chr3R 12965630 intron,exon grsm -,Cyp304a1 + chr3R 12965684 intron,exon grsm -,Cyp304a1 + chr3R 12965738 intron,exon grsm -,Cyp304a1 + chr3R_18_12965001 chr3R_12965001 RC1_1-HE 2156 chr3R 13067006 13067134 chr3R 13067094 13067211 17 77 0.0 0.0 0.0 17.0 205 chr3R 13067006 intron sim + chr3R 13067108 intron sim + chr3R 13067211 intron sim + chr3R_17_13065001 chr3R_13065001 RC1_1-HE 2157 chr3R 13091892 13091917 chr3R 13091992 13092017 17 100 8.5 4.0 6.2 2.4 125 chr3R 13091892 intron timeout + chr3R 13091954 intron timeout + chr3R 13092017 intron timeout + chr3R_17_13090001 chr3R_13090001 RC1_1-HE 2158 chr3R 13143042 13143066 chr3R 13148619 13148643 mdg3 9 5577 2.5 8.5 5.5 1.4 5601 chr3R 13143042 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145842 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148643 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_9_13145001 chr3R_13145001 RC1_1-HE 2159 chr3R 13201769 13201795 chr3R 13201871 13201897 6 102 0.0 3.0 1.5 2.4 128 chr3R 13201769 intergenic not near genes chr3R 13201833 intergenic not near genes chr3R 13201897 intergenic not near genes chr3R_6_13200001 chr3R_13200001 RC1_1-HE 2160 chr3R 13205414 13205440 chr3R 13205496 13205522 8 82 3.5 3.5 3.5 1.8 108 chr3R 13205414 intergenic not near genes chr3R 13205468 intergenic not near genes chr3R 13205522 intergenic not near genes chr3R_8_13205001 chr3R_13205001 RC1_1-HE 2161 chr3R 13245249 13245282 chr3R 13245343 13245376 14 94 4.5 2.5 3.5 3.1 127 chr3R 13245249 intron Ace - chr3R 13245312 intron Ace - chr3R 13245376 intron Ace - chr3R_14_13245001 chr3R_13245001 RC1_1-HE 2162 chr3R 13356091 13356123 chr3R 13356177 13356209 11 86 4.0 2.5 3.2 2.6 118 chr3R 13356091 intergenic not near genes chr3R 13356150 intergenic not near genes chr3R 13356209 intergenic not near genes chr3R_11_13355001 chr3R_13355001 RC1_1-HE 2163 chr3R 13358667 13358698 chr3R 13358745 13358777 9 79 3.5 2.0 2.8 2.4 110 chr3R 13358667 intergenic not near genes chr3R 13358722 intergenic not near genes chr3R 13358777 intergenic not near genes chr3R_9_13355001 chr3R_13355001 RC1_1-HE 2164 chr3R 13359420 13359453 chr3R 13359503 13359536 12 82 4.5 2.5 3.5 2.7 116 chr3R 13359420 intergenic not near genes chr3R 13359478 intergenic not near genes chr3R 13359536 intergenic not near genes chr3R_12_13355001 chr3R_13355001 RC1_1-HE 2165 chr3R 13359797 13359830 chr3R 13359875 13359908 12 78 5.0 3.5 4.2 2.3 111 chr3R 13359797 intergenic not near genes chr3R 13359852 intergenic not near genes chr3R 13359908 intergenic not near genes chr3R_12_13355001 chr3R_13355001 RC1_1-HE 2166 chr3R 13391268 13391302 chr3R 13391356 13391390 13 88 2.5 1.0 1.8 4.6 122 chr3R 13391268 intron CCHa2 - chr3R 13391329 intron CCHa2 - chr3R 13391390 intron CCHa2 - chr3R_13_13390001 chr3R_13390001 RC1_1-HE 2167 chr3R 13439577 13439592 chr3R 13439660 13439675 6 83 3.0 5.0 4.0 1.2 98 chr3R 13439577 intergenic CR42756 - chr3R 13439626 intergenic CR42756 - chr3R 13439675 intergenic CR42756 - chr3R_6_13435001 chr3R_13435001 RC1_1-HE 2168 chr3R 13444479 13444489 chr3R 13444563 13444573 4 84 2.0 5.5 3.8 0.8 94 chr3R 13444479 intergenic CR45679 - chr3R 13444526 intergenic CR45679 - chr3R 13444573 intergenic CR45679 - chr3R_4_13440001 chr3R_13440001 RC1_1-HE 2169 chr3R 13473944 13473971 chr3R 13474028 13474049 12 85 2.5 7.5 5.0 2.0 105 chr3R 13473944 intergenic not near genes chr3R 13473996 intergenic not near genes chr3R 13474049 intergenic not near genes chr3R_12_13470001 chr3R_13470001 RC1_1-HE 2170 chr3R 13555685 13555702 chr3R 13555764 13555781 8 79 6.0 1.0 3.5 1.8 96 chr3R 13555685 intergenic not near genes chr3R 13555733 intergenic not near genes chr3R 13555781 intergenic not near genes chr3R_8_13555001 chr3R_13555001 RC1_1-HE 2171 chr3R 13599079 13599239 chr3R 13599154 13599351 4 103 0.5 8.0 4.2 0.8 272 chr3R 13599079 intergenic not near genes chr3R 13599215 intergenic not near genes chr3R 13599351 intergenic not near genes chr3R_4_13595001 chr3R_13595001 RC1_1-HE 2172 chr3R 13615195 13615215 chr3R 13615277 13615297 6 82 1.0 1.5 1.2 2.7 102 chr3R 13615195 intergenic not near genes chr3R 13615246 intergenic not near genes chr3R 13615297 intergenic not near genes chr3R_6_13615001 chr3R_13615001 RC1_1-HE 2173 chr3R 13617613 13617642 chr3R 13617869 13617898 6 256 2.5 4.5 3.5 1.3 285 chr3R 13617613 intergenic CR45680 - chr3R 13617756 3` UTR CR45680 - chr3R 13617898 3` UTR CR45680 - chr3R_6_13615001 chr3R_13615001 RC1_1-HE 2174 chr3R 13764778 13764802 chr3R 13767251 13767261 6 2470 2.5 4.0 3.2 1.4 2483 chr3R 13764778 intergenic CG34383 + chr3R 13766020 exon CG9312 + chr3R 13767261 intergenic CG9312 +,Cht5 + chr3R_6_13765001 chr3R_13765001 RC1_1-HE 2175 chr3R 13822622 13822645 chr3R 13822690 13822724 6 77 1.0 2.0 1.5 2.4 102 chr3R 13822622 intergenic not near genes chr3R 13822673 intergenic not near genes chr3R 13822724 intergenic not near genes chr3R_6_13820001 chr3R_13820001 RC1_1-HE 2176 chr3R 13906005 13906037 chr3R 13906085 13906117 17 80 10.5 7.5 9.0 1.7 112 chr3R 13906005 intergenic not near genes chr3R 13906061 intergenic not near genes chr3R 13906117 intergenic not near genes chr3R_17_13905001 chr3R_13905001 RC1_1-HE 2177 chr3R 13926341 13926374 chr3R 13926428 13926461 9 87 4.5 1.0 2.8 2.4 120 chr3R 13926341 intergenic not near genes chr3R 13926401 intergenic not near genes chr3R 13926461 intergenic not near genes chr3R_9_13925001 chr3R_13925001 RC1_1-HE 2178 chr3R 13975369 13975406 chr3R 13975450 13975487 15 81 4.0 2.5 3.2 3.6 118 chr3R 13975369 intron rdx - chr3R 13975428 intron rdx - chr3R 13975487 intron rdx - chr3R_15_13975001 chr3R_13975001 RC1_1-HE 2179 chr3R 13987741 13987773 chr3R 13987830 13987862 14 89 5.0 6.0 5.5 2.2 121 chr3R 13987741 intron rdx - chr3R 13987802 intron rdx - chr3R 13987862 intron rdx - chr3R_14_13985001 chr3R_13985001 RC1_1-HE 2180 chr3R 14021639 14021662 chr3R 14023465 14023488 S-element 13 1826 6.0 4.0 5.0 2.2 1849 chr3R 14021639 intron rdx - chr3R 14022564 intron rdx - chr3R 14023488 intron rdx - chr3R_13_14020001 chr3R_14020001 RC1_1-HE 2181 chr3R 14062854 14062874 chr3R 14062931 14062951 14 77 3.5 8.0 5.8 2.1 97 chr3R 14062854 intron foxo + chr3R 14062902 intron foxo + chr3R 14062951 intron foxo + chr3R_14_14060001 chr3R_14060001 RC1_1-HE 2182 chr3R 14079823 14079855 chr3R 14079906 14079938 16 83 3.0 10.0 6.5 2.1 115 chr3R 14079823 intron foxo + chr3R 14079880 intron foxo + chr3R 14079938 intron foxo + chr3R_16_14075001 chr3R_14075001 RC1_1-HE 2183 chr3R 14083404 14083436 chr3R 14083506 14083538 27 102 5.5 0.5 3.0 6.8 134 chr3R 14083404 intron foxo + chr3R 14083471 intron foxo + chr3R 14083538 intron foxo + chr3R_27_14080001 chr3R_14080001 RC1_1-HE 2184 chr3R 14117440 14117470 chr3R 14117517 14117547 10 77 3.0 3.5 3.2 2.4 107 chr3R 14117440 intron Kif19A - chr3R 14117494 intron Kif19A - chr3R 14117547 intron Kif19A - chr3R_10_14115001 chr3R_14115001 RC1_1-HE 2185 chr3R 14132430 14132450 chr3R 14132544 14132564 5 114 0.0 7.0 3.5 1.1 134 chr3R 14132430 intergenic CG14356 - chr3R 14132497 intergenic CG14356 - chr3R 14132564 intergenic CG14356 - chr3R_5_14130001 chr3R_14130001 RC1_1-HE 2186 chr3R 14180810 14180843 chr3R 14185576 14185609 F-element 9 4764 5.5 8.0 6.8 1.2 4799 chr3R 14180810 intron Dop1R1 - chr3R 14183210 intron Dop1R1 - chr3R 14185609 intron Dop1R1 - chr3R_9_14180001 chr3R_14180001 RC1_1-HE 2187 chr3R 14193731 14193764 chr3R 14193810 14193843 17 78 3.5 5.5 4.5 3.1 112 chr3R 14193731 intron Dop1R1 - chr3R 14193787 intron Dop1R1 - chr3R 14193843 intron Dop1R1 - chr3R_17_14190001 chr3R_14190001 RC1_1-HE 2188 chr3R 14246393 14246416 chr3R 14247890 14247913 jockey 7 1494 3.5 2.5 3.0 1.8 1520 chr3R 14246393 intergenic not near genes chr3R 14247153 intergenic not near genes chr3R 14247913 intergenic not near genes chr3R_7_14245001 chr3R_14245001 RC1_1-HE 2189 chr3R 14294041 14294067 chr3R 14294120 14294146 11 79 6.5 8.5 7.5 1.3 105 chr3R 14294041 intron CG12207 + chr3R 14294094 intron CG12207 + chr3R 14294146 intron CG12207 + chr3R_11_14290001 chr3R_14290001 RC1_1-HE 2190 chr3R 14327690 14327711 chr3R 14327773 14327794 6 83 4.5 2.0 3.2 1.4 104 chr3R 14327690 3` UTR CG3321 + chr3R 14327742 intergenic CG3321 +,spn-B + chr3R 14327794 intergenic CG3321 +,spn-B + chr3R_6_14325001 chr3R_14325001 RC1_1-HE 2191 chr3R 14347965 14348001 chr3R 14348043 14348079 18 78 4.0 8.0 6.0 2.6 114 chr3R 14347965 intron NK7.1 - chr3R 14348022 intron NK7.1 - chr3R 14348079 intron NK7.1 - chr3R_18_14345001 chr3R_14345001 RC1_1-HE 2192 chr3R 14384255 14384284 chr3R 14384338 14384349 9 79 3.5 0.5 2.0 3.0 94 chr3R 14384255 intergenic not near genes chr3R 14384302 intergenic not near genes chr3R 14384349 intergenic not near genes chr3R_9_14380001 chr3R_14380001 RC1_1-HE 2193 chr3R 14440722 14440753 chr3R 14440799 14440830 8 77 3.0 2.5 2.8 2.1 108 chr3R 14440722 intron cv-c - chr3R 14440776 intron cv-c - chr3R 14440830 intron cv-c - chr3R_8_14440001 chr3R_14440001 RC1_1-HE 2194 chr3R 14448484 14448515 chr3R 14448571 14448602 11 85 2.5 3.0 2.8 2.9 118 chr3R 14448484 intron cv-c - chr3R 14448543 intron cv-c - chr3R 14448602 intron cv-c - chr3R_11_14445001 chr3R_14445001 RC1_1-HE 2195 chr3R 14458891 14458911 chr3R 14458973 14458993 8 82 0.0 5.5 2.8 2.1 102 chr3R 14458891 intron cv-c - chr3R 14458942 intron cv-c - chr3R 14458993 intron cv-c - chr3R_8_14455001 chr3R_14455001 RC1_1-HE 2196 chr3R 14485062 14485098 chr3R 14485141 14485177 7 79 3.5 4.5 4.0 1.4 115 chr3R 14485062 intergenic not near genes chr3R 14485120 intergenic not near genes chr3R 14485177 intergenic not near genes chr3R_7_14485001 chr3R_14485001 RC1_1-HE 2197 chr3R 14534813 14534847 chr3R 14534892 14534926 19 75 2.0 2.5 2.2 5.9 113 chr3R 14534813 intron Pde6 - chr3R 14534870 intron Pde6 - chr3R 14534926 intron Pde6 - chr3R_19_14530001 chr3R_14530001 RC1_1-HE 2198 chr3R 14547843 14547875 chr3R 14547921 14547954 7 78 2.5 1.0 1.8 2.5 111 chr3R 14547843 intron Pde6 - chr3R 14547898 intron Pde6 - chr3R 14547954 intron Pde6 - chr3R_7_14545001 chr3R_14545001 RC1_1-HE 2199 chr3R 14577959 14577990 chr3R 14578076 14578107 12 117 3.0 4.0 3.5 2.7 148 chr3R 14577959 intron stumps + chr3R 14578033 intron stumps + chr3R 14578107 intron stumps + chr3R_12_14575001 chr3R_14575001 RC1_1-HE 2200 chr3R 14583376 14583410 chr3R 14583475 14583487 19 98 4.0 0.0 2.0 6.3 111 chr3R 14583376 intron stumps + chr3R 14583432 intron stumps + chr3R 14583487 intron stumps + chr3R_19_14580001 chr3R_14580001 RC1_1-HE 2201 chr3R 14601701 14601719 chr3R 14601778 14601796 6 77 6.0 4.5 5.2 1.0 95 chr3R 14601701 intron stumps + chr3R 14601748 intron stumps + chr3R 14601796 intron stumps + chr3R_6_14600001 chr3R_14600001 RC1_1-HE 2202 chr3R 14662314 14662340 chr3R 14662396 14662422 14 82 4.5 3.0 3.8 2.9 108 chr3R 14662314 exon Rad17 - chr3R 14662368 intron Rad17 - chr3R 14662422 exon Rad17 - chr3R_14_14660001 chr3R_14660001 RC1_1-HE 2203 chr3R 14704382 14704418 chr3R 14704460 14704496 15 78 7.0 5.0 6.0 2.1 114 chr3R 14704382 intron kibra - chr3R 14704439 intron kibra - chr3R 14704496 intron kibra - chr3R_15_14700001 chr3R_14700001 RC1_1-HE 2204 chr3R 14726518 14726541 chr3R 14726624 14726647 13 106 2.0 4.0 3.0 3.2 129 chr3R 14726518 intron CG7530 - chr3R 14726582 intron CG7530 - chr3R 14726647 intron CG7530 - chr3R_13_14725001 chr3R_14725001 RC1_1-HE 2205 chr3R 14779062 14779096 chr3R 14779143 14779177 14 81 0.5 1.5 1.0 7.0 115 chr3R 14779062 intron jvl + chr3R 14779120 intron jvl + chr3R 14779177 intron jvl + chr3R_14_14775001 chr3R_14775001 RC1_1-HE 2206 chr3R 14785919 14785936 chr3R 14786027 14786044 10 108 3.5 8.5 6.0 1.4 125 chr3R 14785919 intron jvl + chr3R 14785982 intron jvl + chr3R 14786044 intron jvl + chr3R_10_14785001 chr3R_14785001 RC1_1-HE 2207 chr3R 14847642 14847674 chr3R 14847739 14847771 14 96 10.5 1.5 6.0 2.0 129 chr3R 14847642 intron btsz - chr3R 14847706 intron btsz - chr3R 14847771 intron btsz - chr3R_14_14845001 chr3R_14845001 RC1_1-HE 2208 chr3R 14879047 14879051 chr3R 14879132 14879136 4 85 2.5 1.0 1.8 1.4 89 chr3R 14879047 intergenic CG3631 + chr3R 14879092 intergenic CG3631 + chr3R 14879136 intergenic CG3631 + chr3R_4_14875001 chr3R_14875001 RC1_1-HE 2209 chr3R 14936457 14936493 chr3R 14936548 14936584 8 88 3.0 1.0 2.0 2.7 127 chr3R 14936457 intergenic not near genes chr3R 14936520 intergenic not near genes chr3R 14936584 intergenic not near genes chr3R_8_14935001 chr3R_14935001 RC1_1-HE 2210 chr3R 14951771 14951807 chr3R 14952264 14952300 22 493 6.0 2.0 4.0 4.4 529 chr3R 14951771 intergenic not near genes chr3R 14952036 intergenic not near genes chr3R 14952300 intergenic not near genes chr3R_22_14950001 chr3R_14950001 RC1_1-HE 2211 chr3R 14957709 14957720 chr3R 14957786 14957797 8 77 11.0 0.0 5.5 1.2 88 chr3R 14957709 intergenic not near genes chr3R 14957753 intergenic not near genes chr3R 14957797 intergenic not near genes chr3R_8_14955001 chr3R_14955001 RC1_1-HE 2212 chr3R 14975141 14975160 chr3R 14975664 14975683 10 523 23.0 25.0 24.0 0.4 542 chr3R 14975141 intergenic not near genes chr3R 14975412 intergenic not near genes chr3R 14975683 intergenic not near genes chr3R_10_14975001 chr3R_14975001 RC1_1-HE 2213 chr3R 15009157 15009174 chr3R 15009241 15009245 8 90 3.5 2.5 3.0 2.0 88 chr3R 15009157 intergenic not near genes chr3R 15009201 intergenic not near genes chr3R 15009245 intergenic not near genes chr3R_8_15005001 chr3R_15005001 RC1_1-HE 2214 chr3R 15041429 15041458 chr3R 15045198 15045227 Doc 10 3769 2.0 4.5 3.2 2.4 3798 chr3R 15041429 intergenic not near genes chr3R 15043328 intergenic not near genes chr3R 15045227 intergenic not near genes chr3R_10_15040001 chr3R_15040001 RC1_1-HE 2215 chr3R 15067184 15067211 chr3R 15067269 15067296 11 85 0.5 7.0 3.8 2.3 112 chr3R 15067184 intron dpr9 - chr3R 15067240 intron dpr9 - chr3R 15067296 intron dpr9 - chr3R_11_15065001 chr3R_15065001 RC1_1-HE 2216 chr3R 15079806 15079839 chr3R 15080048 15080081 pogo 8 242 2.5 4.0 3.2 1.9 275 chr3R 15079806 3` UTR CG6966 - chr3R 15079944 3` UTR CG6966 - chr3R 15080081 3` UTR CG6966 - chr3R_8_15075001 chr3R_15075001 RC1_1-HE 2217 chr3R 15102525 15102530 chr3R 15109780 15109785 412 4 7255 2.5 6.5 4.5 0.7 7260 chr3R 15102525 intron CG42788 - chr3R 15106155 intron CG42788 - chr3R 15109785 intron CG42788 - chr3R_4_15105001 chr3R_15105001 RC1_1-HE 2218 chr3R 15127778 15127810 chr3R 15127859 15127891 15 81 5.0 4.0 4.5 2.7 113 chr3R 15127778 intron CG42788 - chr3R 15127834 intron CG42788 - chr3R 15127891 intron CG42788 - chr3R_15_15125001 chr3R_15125001 RC1_1-HE 2219 chr3R 15132063 15132085 chr3R 15135124 15135146 Juan 12 3061 10.5 12.5 11.5 1.0 3083 chr3R 15132063 intergenic CG42788 - chr3R 15133604 intergenic not near genes chr3R 15135146 3` UTR CG6912 - chr3R_12_15130001 chr3R_15130001 RC1_1-HE 2220 chr3R 15156603 15156634 chr3R 15156685 15156715 7 82 2.0 3.0 2.5 2.0 112 chr3R 15156603 intron Gyc88E + chr3R 15156659 intron Gyc88E + chr3R 15156715 intron Gyc88E + chr3R_7_15155001 chr3R_15155001 RC1_1-HE 2221 chr3R 15162540 15162562 chr3R 15167309 15167330 F-element 5 4768 4.5 0.0 2.2 1.6 4790 chr3R 15162540 intron Gyc88E + chr3R 15164935 intron Gyc88E + chr3R 15167330 intron Gyc88E + chr3R_5_15160001 chr3R_15160001 RC1_1-HE 2222 chr3R 15167807 15167834 chr3R 15167965 15167992 10 158 2.5 2.0 2.2 3.1 185 chr3R 15167807 intron Gyc88E + chr3R 15167900 intron Gyc88E + chr3R 15167992 intron Gyc88E + chr3R_10_15165001 chr3R_15165001 RC1_1-HE 2223 chr3R 15188455 15188471 chr3R 15192107 15192140 11 3654 49.5 36.5 43.0 0.2 3685 chr3R 15188455 exon Gyc88E + chr3R 15190298 3` UTR Gyc88E + chr3R 15192140 exon CG6752 - chr3R_11_15190001 chr3R_15190001 RC1_1-HE 2224 chr3R 15257565 15257593 chr3R 15257645 15257673 8 80 4.0 0.5 2.2 2.5 108 chr3R 15257565 3` UTR CG42404 + chr3R 15257619 3` UTR CG42404 + chr3R 15257673 3` UTR CG42404 + chr3R_8_15255001 chr3R_15255001 RC1_1-HE 2225 chr3R 15316011 15316038 chr3R 15316095 15316122 4 84 2.0 1.5 1.8 1.4 111 chr3R 15316011 intergenic CG14866 + chr3R 15316066 intergenic CG14866 + chr3R 15316122 intergenic CG14866 + chr3R_4_15315001 chr3R_15315001 RC1_1-HE 2226 chr3R 15406150 15406171 chr3R 15406232 15406253 7 82 1.5 0.5 1.0 3.5 103 chr3R 15406150 intron CG6125 - chr3R 15406202 intron CG6125 - chr3R 15406253 intron CG6125 - chr3R_7_15405001 chr3R_15405001 RC1_1-HE 2227 chr3R 15523007 15523027 chr3R 15523115 15523135 8 108 3.5 0.5 2.0 2.7 128 chr3R 15523007 intergenic not near genes chr3R 15523071 intergenic not near genes chr3R 15523135 intergenic not near genes chr3R_8_15520001 chr3R_15520001 RC1_1-HE 2228 chr3R 15594656 15594672 chr3R 15594740 15594756 8 84 0.0 2.0 1.0 4.0 100 chr3R 15594656 intergenic not near genes chr3R 15594706 intergenic not near genes chr3R 15594756 intergenic not near genes chr3R_8_15590001 chr3R_15590001 RC1_1-HE 2229 chr3R 15601163 15601196 chr3R 15608686 15608719 412 16 7523 5.5 7.0 6.2 2.2 7556 chr3R 15601163 intergenic not near genes chr3R 15604941 intergenic not near genes chr3R 15608719 intergenic not near genes chr3R_16_15600001 chr3R_15600001 RC1_1-HE 2230 chr3R 15618728 15618763 chr3R 15626203 15626238 blood 13 7475 2.5 6.5 4.5 2.4 7510 chr3R 15618728 intergenic not near genes chr3R 15622483 intergenic not near genes chr3R 15626238 intergenic not near genes chr3R_13_15620001 chr3R_15620001 RC1_1-HE 2231 chr3R 15630917 15630950 chr3R 15631007 15631040 15 90 2.5 5.5 4.0 3.0 123 chr3R 15630917 intergenic not near genes chr3R 15630978 intergenic not near genes chr3R 15631040 intergenic not near genes chr3R_15_15630001 chr3R_15630001 RC1_1-HE 2232 chr3R 15635231 15635236 chr3R 15635345 15635350 4 114 0.5 11.0 5.8 0.6 119 chr3R 15635231 intergenic CG43335 + chr3R 15635290 intergenic CG43335 + chr3R 15635350 intergenic CG43335 + chr3R_4_15635001 chr3R_15635001 RC1_1-HE 2233 chr3R 15646789 15646800 chr3R 15646873 15646884 8 84 0.0 7.5 3.8 1.7 95 chr3R 15646789 intergenic not near genes chr3R 15646836 intergenic not near genes chr3R 15646884 intergenic not near genes chr3R_8_15645001 chr3R_15645001 RC1_1-HE 2234 chr3R 15676351 15676382 chr3R 15676430 15676461 21 78 3.0 8.5 5.8 3.1 110 chr3R 15676351 intron pxb + chr3R 15676406 intron pxb + chr3R 15676461 intron pxb + chr3R_21_15675001 chr3R_15675001 RC1_1-HE 2235 chr3R 15705481 15705509 chr3R 15705558 15705586 13 77 4.5 3.5 4.0 2.6 105 chr3R 15705481 intron CG5404 + chr3R 15705534 intron CG5404 + chr3R 15705586 intron CG5404 + chr3R_13_15705001 chr3R_15705001 RC1_1-HE 2236 chr3R 15715808 15715831 chr3R 15715894 15715917 6 86 3.0 1.5 2.2 1.9 109 chr3R 15715808 exon CG31294 - chr3R 15715862 intron CG31294 - chr3R 15715917 intron CG31294 - chr3R_6_15715001 chr3R_15715001 RC1_1-HE 2237 chr3R 15749003 15749039 chr3R 15749085 15749127 7 86 2.0 1.5 1.8 2.5 124 chr3R 15749003 intergenic not near genes chr3R 15749065 intergenic not near genes chr3R 15749127 intergenic not near genes chr3R_7_15745001 chr3R_15745001 RC1_1-HE 2238 chr3R 15756161 15756181 chr3R 15756272 15756292 5 111 1.0 2.0 1.5 2.0 131 chr3R 15756161 intergenic not near genes chr3R 15756226 intergenic not near genes chr3R 15756292 intergenic not near genes chr3R_5_15755001 chr3R_15755001 RC1_1-HE 2239 chr3R 15760777 15760813 chr3R 15760872 15760908 24 95 2.5 3.0 2.8 6.3 131 chr3R 15760777 intergenic not near genes chr3R 15760842 intergenic not near genes chr3R 15760908 intergenic not near genes chr3R_24_15760001 chr3R_15760001 RC1_1-HE 2240 chr3R 15790145 15790265 chr3R 15790254 15790384 4 112 18.5 19.5 19.0 0.2 239 chr3R 15790145 exon c(3)G - chr3R 15790264 exon c(3)G - chr3R 15790384 exon c(3)G - chr3R_4_15790001 chr3R_15790001 RC1_1-HE 2241 chr3R 15825101 15825133 chr3R 15825206 15825238 15 105 0.5 2.0 1.2 6.8 137 chr3R 15825101 intron rec - chr3R 15825170 intron rec - chr3R 15825238 intron rec - chr3R_15_15825001 chr3R_15825001 RC1_1-HE 2242 chr3R 15928333 15928361 chr3R 15928417 15928445 10 84 2.5 4.5 3.5 2.2 112 chr3R 15928333 intron CG4221 + chr3R 15928389 intron CG4221 + chr3R 15928445 intron CG4221 + chr3R_10_15925001 chr3R_15925001 RC1_1-HE 2243 chr3R 15946853 15946875 chr3R 15946949 15946971 15 96 4.5 0.0 2.2 4.7 118 chr3R 15946853 intron Sap47 + chr3R 15946912 intron Sap47 + chr3R 15946971 intron Sap47 + chr3R_15_15945001 chr3R_15945001 RC1_1-HE 2244 chr3R 15948838 15948868 chr3R 15948943 15948973 20 105 8.5 0.0 4.2 3.8 135 chr3R 15948838 intron Sap47 + chr3R 15948906 intron Sap47 + chr3R 15948973 intron Sap47 + chr3R_20_15945001 chr3R_15945001 RC1_1-HE 2245 chr3R 15984501 15984536 chr3R 15984604 15984639 13 103 7.5 4.0 5.8 1.9 138 chr3R 15984501 intergenic not near genes chr3R 15984570 intergenic not near genes chr3R 15984639 intergenic not near genes chr3R_13_15980001 chr3R_15980001 RC1_1-HE 2246 chr3R 16033412 16033442 chr3R 16033494 16033524 12 82 2.5 5.0 3.8 2.5 112 chr3R 16033412 intron pnr + chr3R 16033468 intron pnr + chr3R 16033524 intron pnr + chr3R_12_16030001 chr3R_16030001 RC1_1-HE 2247 chr3R 16051193 16051227 chr3R 16051280 16051314 9 83 4.0 3.0 3.5 2.0 121 chr3R 16051193 intron msps + chr3R 16051254 intron msps + chr3R 16051314 intron msps + chr3R_9_16050001 chr3R_16050001 RC1_1-HE 2248 chr3R 16073436 16073469 chr3R 16073541 16073574 7 105 4.0 0.0 2.0 2.3 138 chr3R 16073436 intron Mhcl - chr3R 16073505 intron Mhcl - chr3R 16073574 intron Mhcl - chr3R_7_16070001 chr3R_16070001 RC1_1-HE 2249 chr3R 16189413 16189441 chr3R 16189817 16189845 invader4 8 404 5.5 4.5 5.0 1.3 432 chr3R 16189413 intron sra + chr3R 16189629 intron sra + chr3R 16189845 intron sra + chr3R_8_16185001 chr3R_16185001 RC1_1-HE 2250 chr3R 16214287 16214292 chr3R 16214371 16214376 8 84 9.5 10.0 9.8 0.7 89 chr3R 16214287 5` UTR CR45641 + chr3R 16214332 5` UTR CR45641 + chr3R 16214376 5` UTR CR45641 + chr3R_8_16210001 chr3R_16210001 RC1_1-HE 2251 chr3R 16238650 16238684 chr3R 16238776 16238810 23 126 3.0 4.5 3.8 4.8 160 chr3R 16238650 intron tara + chr3R 16238730 intron tara + chr3R 16238810 intron tara + chr3R_23_16235001 chr3R_16235001 RC1_1-HE 2252 chr3R 16253561 16253570 chr3R 16253647 16253656 4 86 0.0 3.0 1.5 1.6 95 chr3R 16253561 intron tara + chr3R 16253608 intron tara + chr3R 16253656 intron tara + chr3R_4_16250001 chr3R_16250001 RC1_1-HE 2253 chr3R 16256580 16256591 chr3R 16256671 16256682 11 91 14.0 0.0 7.0 1.4 102 chr3R 16256580 intron tara + chr3R 16256631 intron tara + chr3R 16256682 intron tara + chr3R_11_16255001 chr3R_16255001 RC1_1-HE 2254 chr3R 16260835 16260841 chr3R 16260916 16260922 5 81 0.0 9.0 4.5 0.9 87 chr3R 16260835 intergenic not near genes chr3R 16260878 intergenic bor - chr3R 16260922 intergenic bor - chr3R_5_16260001 chr3R_16260001 RC1_1-HE 2255 chr3R 16298872 16298907 chr3R 16298958 16298993 19 86 5.0 3.0 4.0 3.8 121 chr3R 16298872 intron gish + chr3R 16298932 intron gish + chr3R 16298993 intron gish + chr3R_19_16295001 chr3R_16295001 RC1_1-HE 2256 chr3R 16303217 16303240 chr3R 16303304 16303327 6 87 5.0 2.0 3.5 1.3 110 chr3R 16303217 3` UTR gish + chr3R 16303272 3` UTR gish + chr3R 16303327 3` UTR gish + chr3R_6_16300001 chr3R_16300001 RC1_1-HE 2257 chr3R 16406192 16406226 chr3R 16406286 16406320 16 94 7.5 5.0 6.2 2.2 128 chr3R 16406192 intergenic CR45630 + chr3R 16406256 intergenic CR45630 + chr3R 16406320 intergenic CR45630 + chr3R_16_16405001 chr3R_16405001 RC1_1-HE 2258 chr3R 16456640 16456652 chr3R 16458506 16458518 4 1866 28.0 14.0 21.0 0.2 1878 chr3R 16456640 exon CG14883 + chr3R 16457579 exon CG14883 + chr3R 16458518 3` UTR CG42232 - chr3R_4_16455001 chr3R_16455001 RC1_1-HE 2259 chr3R 16472580 16472595 chr3R 16472657 16472672 9 77 6.0 9.5 7.8 1.0 92 chr3R 16472580 intergenic Gyc-89Da + chr3R 16472626 5` UTR Gyc-89Da + chr3R 16472672 5` UTR Gyc-89Da + chr3R_9_16470001 chr3R_16470001 RC1_1-HE 2260 chr3R 16545064 16545100 chr3R 16545146 16545182 11 81 0.0 5.0 2.5 3.1 118 chr3R 16545064 intron CG42342 + chr3R 16545123 intron CG42342 + chr3R 16545182 intron CG42342 + chr3R_11_16545001 chr3R_16545001 RC1_1-HE 2261 chr3R 16557646 16557868 chr3R 16557748 16557923 25 94 2.5 8.5 5.5 3.8 277 chr3R 16557646 intron CG42342 + chr3R 16557784 intron CG42342 + chr3R 16557923 intron CG42342 + chr3R_25_16555001 chr3R_16555001 RC1_1-HE 2262 chr3R 16582907 16582918 chr3R 16582987 16582998 7 80 7.0 7.5 7.2 0.9 91 chr3R 16582907 intron Scp2 - chr3R 16582952 intron Scp2 - chr3R 16582998 intron Scp2 - chr3R_7_16580001 chr3R_16580001 RC1_1-HE 2263 chr3R 16651127 16651162 chr3R 16651222 16651257 8 95 1.5 3.0 2.2 2.5 130 chr3R 16651127 5` UTR CG14906 - chr3R 16651192 intergenic CG14907 -,CG14906 - chr3R 16651257 3` UTR CG14907 - chr3R_8_16650001 chr3R_16650001 RC1_1-HE 2264 chr3R 16725784 16725812 chr3R 16725866 16725894 7 82 2.0 2.5 2.2 2.2 110 chr3R 16725784 intron Ubx - chr3R 16725839 intron Ubx - chr3R 16725894 intron Ubx - chr3R_7_16725001 chr3R_16725001 RC1_1-HE 2265 chr3R 16756319 16756353 chr3R 16762511 16762545 diver 11 6192 3.5 2.0 2.8 2.9 6226 chr3R 16756319 intron bxd - chr3R 16759432 intron bxd - chr3R 16762545 intron bxd - chr3R_11_16755001 chr3R_16755001 RC1_1-HE 2266 chr3R 16856617 16856640 chr3R 16856721 16856744 7 104 2.0 3.0 2.5 2.0 127 chr3R 16856617 intron iab-8 - chr3R 16856680 intron iab-8 - chr3R 16856744 intron iab-8 - chr3R_7_16855001 chr3R_16855001 RC1_1-HE 2267 chr3R 16860334 16860368 chr3R 16860413 16860447 9 79 1.0 1.0 1.0 4.5 113 chr3R 16860334 intron iab-8 - chr3R 16860390 intron iab-8 - chr3R 16860447 intron iab-8 - chr3R_9_16860001 chr3R_16860001 RC1_1-HE 2268 chr3R 16910333 16910360 chr3R 16910415 16910442 8 82 0.0 3.0 1.5 3.2 109 chr3R 16910333 intron iab-8 - chr3R 16910388 intron iab-8 - chr3R 16910442 intron iab-8 - chr3R_8_16910001 chr3R_16910001 RC1_1-HE 2269 chr3R 16936947 16936981 chr3R 16937044 16937078 22 96 7.5 6.0 6.8 2.8 131 chr3R 16936947 intron Abd-B - chr3R 16937012 intron Abd-B - chr3R 16937078 intron Abd-B - chr3R_22_16935001 chr3R_16935001 RC1_1-HE 2270 chr3R 17054960 17054976 chr3R 17055045 17055045 5 82 6.0 7.0 6.5 0.7 85 chr3R 17054960 intron Dad + chr3R 17055002 intron Dad + chr3R 17055045 intron Dad + chr3R_5_17055001 chr3R_17055001 RC1_1-HE 2271 chr3R 17175944 17175969 chr3R 17176024 17176038 4 77 5.5 5.5 5.5 0.6 94 chr3R 17175944 intron Mur89F - chr3R 17175991 intron Mur89F - chr3R 17176038 intron Mur89F - chr3R_4_17175001 chr3R_17175001 RC1_1-HE 2272 chr3R 17176656 17176689 chr3R 17176762 17176794 10 105 6.5 1.0 3.8 2.1 138 chr3R 17176656 intron Mur89F - chr3R 17176725 intron Mur89F - chr3R 17176794 intron Mur89F - chr3R_10_17175001 chr3R_17175001 RC1_1-HE 2273 chr3R 17183233 17183260 chr3R 17183589 17183616 13 356 3.0 5.0 4.0 2.6 383 chr3R 17183233 intron Mur89F - chr3R 17183424 intron Mur89F - chr3R 17183616 intron Mur89F - chr3R_13_17180001 chr3R_17180001 RC1_1-HE 2274 chr3R 17215017 17215051 chr3R 17215115 17215148 5 97 4.0 0.0 2.0 1.7 131 chr3R 17215017 intergenic not near genes chr3R 17215082 intergenic not near genes chr3R 17215148 intergenic not near genes chr3R_5_17215001 chr3R_17215001 RC1_1-HE 2275 chr3R 17268675 17268695 chr3R 17268798 17268818 8 123 5.5 6.5 6.0 1.1 143 chr3R 17268675 intergenic not near genes chr3R 17268746 intergenic not near genes chr3R 17268818 intergenic not near genes chr3R_8_17265001 chr3R_17265001 RC1_1-HE 2276 chr3R 17294666 17294693 chr3R 17295095 17295122 BS 10 429 2.0 4.5 3.2 2.4 456 chr3R 17294666 intergenic not near genes chr3R 17294894 intergenic not near genes chr3R 17295122 intergenic not near genes chr3R_10_17290001 chr3R_17290001 RC1_1-HE 2277 chr3R 17346680 17346720 chr3R 17348244 17348284 F-element 15 1564 0.5 5.5 3.0 3.8 1604 chr3R 17346680 intron beat-IIa - chr3R 17347482 intron beat-IIa - chr3R 17348284 intron beat-IIa - chr3R_15_17345001 chr3R_17345001 RC1_1-HE 2278 chr3R 17355490 17355523 chr3R 17355569 17355602 17 77 2.5 2.5 2.5 4.9 112 chr3R 17355490 intron beat-IIa - chr3R 17355546 intron beat-IIa - chr3R 17355602 intron beat-IIa - chr3R_17_17355001 chr3R_17355001 RC1_1-HE 2279 chr3R 17407001 17407032 chr3R 17407104 17407135 14 103 2.0 3.5 2.8 3.7 134 chr3R 17407001 intron CG42798 + chr3R 17407068 5` UTR CG42798 + chr3R 17407135 exon CG42798 + chr3R_14_17405001 chr3R_17405001 RC1_1-HE 2280 chr3R 17418877 17418897 chr3R 17419027 17419047 4 150 2.0 1.0 1.5 1.6 170 chr3R 17418877 exon CG42834 + chr3R 17418962 exon CG42834 + chr3R 17419047 exon CG42834 + chr3R_4_17415001 chr3R_17415001 RC1_1-HE 2281 chr3R 17441707 17441731 chr3R 17441786 17441810 12 79 5.0 3.0 4.0 2.4 103 chr3R 17441707 intron CG5873 + chr3R 17441758 intron CG5873 + chr3R 17441810 intron CG5873 + chr3R_12_17440001 chr3R_17440001 RC1_1-HE 2282 chr3R 17443527 17443560 chr3R 17443636 17443669 6 109 2.0 1.5 1.8 2.1 142 chr3R 17443527 intron CG5873 + chr3R 17443598 intron CG5873 + chr3R 17443669 intron CG5873 + chr3R_6_17440001 chr3R_17440001 RC1_1-HE 2283 chr3R 17463156 17463182 chr3R 17463242 17463268 6 86 4.0 5.5 4.8 1.0 112 chr3R 17463156 intergenic not near genes chr3R 17463212 intergenic not near genes chr3R 17463268 intergenic not near genes chr3R_6_17460001 chr3R_17460001 RC1_1-HE 2284 chr3R 17467921 17467955 chr3R 17468040 17468074 12 118 3.0 3.5 3.2 2.9 153 chr3R 17467921 intergenic not near genes chr3R 17467998 intergenic not near genes chr3R 17468074 intergenic not near genes chr3R_12_17465001 chr3R_17465001 RC1_1-HE 2285 chr3R 17507447 17507477 chr3R 17507526 17507556 9 78 3.5 3.5 3.5 2.0 109 chr3R 17507447 intergenic not near genes chr3R 17507502 intergenic not near genes chr3R 17507556 intergenic not near genes chr3R_9_17505001 chr3R_17505001 RC1_1-HE 2286 chr3R 17556816 17556840 chr3R 17556905 17556924 9 88 3.5 8.0 5.8 1.3 108 chr3R 17556816 intergenic not near genes chr3R 17556870 intergenic not near genes chr3R 17556924 intergenic not near genes chr3R_9_17555001 chr3R_17555001 RC1_1-HE 2287 chr3R 17591290 17591321 chr3R 17591726 17591758 F-element 7 437 4.5 2.5 3.5 1.6 468 chr3R 17591290 intergenic not near genes chr3R 17591524 intergenic not near genes chr3R 17591758 intergenic not near genes chr3R_7_17590001 chr3R_17590001 RC1_1-HE 2288 chr3R 17612447 17612457 chr3R 17612526 17612536 4 79 0.0 5.0 2.5 1.1 89 chr3R 17612447 intergenic CG34281 + chr3R 17612492 intergenic CG34281 + chr3R 17612536 intergenic CG34281 + chr3R_4_17610001 chr3R_17610001 RC1_1-HE 2289 chr3R 17625923 17625932 chr3R 17626000 17626009 9 77 4.5 0.0 2.2 2.8 86 chr3R 17625923 exon AttD + chr3R 17625966 3` UTR AttD + chr3R 17626009 3` UTR AttD + chr3R_9_17625001 chr3R_17625001 RC1_1-HE 2290 chr3R 17629859 17629880 chr3R 17629961 17629982 10 102 0.0 2.0 1.0 5.0 123 chr3R 17629859 intergenic not near genes chr3R 17629920 intergenic not near genes chr3R 17629982 intergenic not near genes chr3R_10_17625001 chr3R_17625001 RC1_1-HE 2291 chr3R 17653103 17653126 chr3R 17653185 17653208 11 82 3.5 1.0 2.2 3.4 105 chr3R 17653103 intron,intron CG14322 +,CR45223 - chr3R 17653156 intron,intron CG14322 +,CR45223 - chr3R 17653208 intron,intron CG14322 +,CR45223 - chr3R_11_17650001 chr3R_17650001 RC1_1-HE 2292 chr3R 17734126 17734135 chr3R 17734216 17734225 4 90 7.0 4.5 5.8 0.6 99 chr3R 17734126 3` UTR CG14321 + chr3R 17734176 3` UTR CG14321 + chr3R 17734225 3` UTR CG14321 + chr3R_4_17730001 chr3R_17730001 RC1_1-HE 2293 chr3R 17734547 17734564 chr3R 17734629 17734646 7 82 0.0 0.0 0.0 7.0 99 chr3R 17734547 intergenic CG14321 + chr3R 17734596 intergenic CG14321 + chr3R 17734646 intergenic CG14321 + chr3R_7_17730001 chr3R_17730001 RC1_1-HE 2294 chr3R 17768043 17768072 chr3R 17768146 17768177 15 105 5.0 3.5 4.2 2.9 134 chr3R 17768043 intergenic CG43102 - chr3R 17768110 intergenic CG43102 - chr3R 17768177 intergenic CG43102 - chr3R_15_17765001 chr3R_17765001 RC1_1-HE 2295 chr3R 17773374 17773390 chr3R 17773470 17773486 9 96 4.5 8.0 6.2 1.2 112 chr3R 17773374 intron CG43102 - chr3R 17773430 intron CG43102 - chr3R 17773486 exon CG43102 - chr3R_9_17770001 chr3R_17770001 RC1_1-HE 2296 chr3R 17802862 17802892 chr3R 17803375 17803405 10 512 3.0 2.5 2.8 2.6 543 chr3R 17802862 exon CG17806 - chr3R 17803134 exon CG17806 - chr3R 17803405 3` UTR CG17802 - chr3R_10_17800001 chr3R_17800001 RC1_1-HE 2297 chr3R 17822129 17822166 chr3R 17822208 17822245 24 78 6.5 7.0 6.8 3.1 116 chr3R 17822129 intron tinc + chr3R 17822187 intron tinc + chr3R 17822245 intron tinc + chr3R_24_17820001 chr3R_17820001 RC1_1-HE 2298 chr3R 17834061 17834087 chr3R 17834155 17834181 7 93 4.0 9.5 6.8 0.9 120 chr3R 17834061 intron tinc + chr3R 17834121 intron tinc + chr3R 17834181 intron tinc + chr3R_7_17830001 chr3R_17830001 RC1_1-HE 2299 chr3R 17891773 17891796 chr3R 17891883 17891906 14 110 5.0 1.0 3.0 3.5 133 chr3R 17891773 intron Rim - chr3R 17891840 intron Rim - chr3R 17891906 intron Rim - chr3R_14_17890001 chr3R_17890001 RC1_1-HE 2300 chr3R 17899090 17899102 chr3R 17899169 17899181 6 79 9.5 4.0 6.8 0.8 91 chr3R 17899090 intron Rim - chr3R 17899136 intron Rim - chr3R 17899181 intron Rim - chr3R_6_17895001 chr3R_17895001 RC1_1-HE 2301 chr3R 17925854 17925889 chr3R 17927322 17927357 hobo 22 1466 6.0 9.5 7.8 2.5 1503 chr3R 17925854 intron cpo + chr3R 17926606 intron cpo + chr3R 17927357 intron cpo + chr3R_22_17925001 chr3R_17925001 RC1_1-HE 2302 chr3R 17968104 17968132 chr3R 17968183 17968211 5 79 4.0 4.0 4.0 1.0 107 chr3R 17968104 intron cpo + chr3R 17968158 intron cpo + chr3R 17968211 intron cpo + chr3R_5_17965001 chr3R_17965001 RC1_1-HE 2303 chr3R 17983210 17983246 chr3R 17983287 17983323 12 76 3.0 0.5 1.8 4.3 113 chr3R 17983210 intron cpo + chr3R 17983266 intron cpo + chr3R 17983323 intron cpo + chr3R_12_17980001 chr3R_17980001 RC1_1-HE 2304 chr3R 18061452 18061460 chr3R 18061545 18061553 7 93 0.0 1.0 0.5 4.7 101 chr3R 18061452 intergenic not near genes chr3R 18061502 intergenic not near genes chr3R 18061553 intergenic not near genes chr3R_7_18060001 chr3R_18060001 RC1_1-HE 2305 chr3R 18078155 18078177 chr3R 18078235 18078257 6 80 6.0 0.0 3.0 1.5 102 chr3R 18078155 intergenic not near genes chr3R 18078206 intergenic not near genes chr3R 18078257 intergenic not near genes chr3R_6_18075001 chr3R_18075001 RC1_1-HE 2306 chr3R 18087680 18087713 chr3R 18088925 18088958 5 1245 24.0 18.0 21.0 0.2 1278 chr3R 18087680 intergenic not near genes chr3R 18088319 intergenic not near genes chr3R 18088958 intergenic not near genes chr3R_5_18085001 chr3R_18085001 RC1_1-HE 2307 chr3R 18101373 18101389 chr3R 18101450 18101466 6 77 4.5 7.0 5.8 0.9 93 chr3R 18101373 intron sr + chr3R 18101420 intron sr + chr3R 18101466 intron sr + chr3R_6_18100001 chr3R_18100001 RC1_1-HE 2308 chr3R 18122892 18122899 chr3R 18122970 18122977 4 78 3.0 5.5 4.2 0.8 85 chr3R 18122892 intron sr + chr3R 18122934 intron sr + chr3R 18122977 intron sr + chr3R_4_18120001 chr3R_18120001 RC1_1-HE 2309 chr3R 18170796 18170827 chr3R 18170877 18170908 6 81 4.5 4.0 4.2 1.2 112 chr3R 18170796 intron PP2A-B' + chr3R 18170852 intron PP2A-B' + chr3R 18170908 intron PP2A-B' + chr3R_6_18170001 chr3R_18170001 RC1_1-HE 2310 chr3R 4904880 4904885 chr3R 18214585 18214590 5 13309705 28.5 15.5 22.0 0.2 13309710 chr3R 4904880 intergenic not near genes chr3R 11559735 3` UTR CG10898 + chr3R 18214590 3` UTR CG7985 + chr3R_5_11555001 chr3R_11555001 RC1_1-HE 2311 chr3R 18215762 18215769 chr3R 18215932 18215939 6 170 0.0 7.0 3.5 1.3 177 chr3R 18215762 intergenic CG14314 + chr3R 18215850 intergenic CG14314 + chr3R 18215939 intergenic CG14314 + chr3R_6_18215001 chr3R_18215001 RC1_1-HE 2312 chr3R 18262751 18262783 chr3R 18262834 18262850 8 81 4.5 0.5 2.5 2.3 99 chr3R 18262751 intergenic not near genes chr3R 18262800 intergenic not near genes chr3R 18262850 intergenic not near genes chr3R_8_18260001 chr3R_18260001 RC1_1-HE 2313 chr3R 18338995 18339026 chr3R 18339100 18339131 11 105 0.5 2.5 1.5 4.4 136 chr3R 18338995 intron CG15803 - chr3R 18339063 intron CG15803 - chr3R 18339131 intron CG15803 - chr3R_11_18335001 chr3R_18335001 RC1_1-HE 2314 chr3R 18352574 18352588 chr3R 18352668 18352682 8 94 11.5 4.0 7.8 0.9 108 chr3R 18352574 intron CG15803 - chr3R 18352628 intron CG15803 - chr3R 18352682 intron CG15803 - chr3R_8_18350001 chr3R_18350001 RC1_1-HE 2315 chr3R 18352592 18352609 chr3R 18352665 18352703 11 92 3.0 2.5 2.8 2.9 111 chr3R 18352592 intron CG15803 - chr3R 18352648 intron CG15803 - chr3R 18352703 intron CG15803 - chr3R_11_18350001 chr3R_18350001 RC1_1-HE 2316 chr3R 18358351 18358368 chr3R 18358562 18358574 14 211 0.5 4.0 2.2 4.4 223 chr3R 18358351 intron CG15803 - chr3R 18358462 intron CG15803 - chr3R 18358574 intron CG15803 - chr3R_14_18355001 chr3R_18355001 RC1_1-HE 2317 chr3R 18436585 18436606 chr3R 18436747 18436768 7 160 3.0 0.0 1.5 2.8 183 chr3R 18436585 intron fru - chr3R 18436676 intron fru - chr3R 18436768 intron fru - chr3R_7_18435001 chr3R_18435001 RC1_1-HE 2318 chr3R 18473237 18473255 chr3R 18473325 18473343 6 88 0.0 0.0 0.0 6.0 106 chr3R 18473237 intron fru - chr3R 18473290 intron fru - chr3R 18473343 intron fru - chr3R_6_18470001 chr3R_18470001 RC1_1-HE 2319 chr3R 18537758 18537777 chr3R 18537860 18537879 8 102 7.0 2.0 4.5 1.5 121 chr3R 18537758 intron fru - chr3R 18537818 intron fru - chr3R 18537879 intron fru - chr3R_8_18535001 chr3R_18535001 RC1_1-HE 2320 chr3R 18617784 18617810 chr3R 18617864 18617890 9 80 0.0 2.0 1.0 4.5 106 chr3R 18617784 intron,intron qin +,CG14304 - chr3R 18617837 intron,intron qin +,CG14304 - chr3R 18617890 intron,intron qin +,CG14304 - chr3R_9_18615001 chr3R_18615001 RC1_1-HE 2321 chr3R 18618267 18618297 chr3R 18618353 18618383 14 86 1.5 3.0 2.2 4.4 116 chr3R 18618267 intron,intron qin +,CG14304 - chr3R 18618325 intron,intron qin +,CG14304 - chr3R 18618383 intron,intron qin +,CG14304 - chr3R_14_18615001 chr3R_18615001 RC1_1-HE 2322 chr3R 18681822 18681840 chr3R 18681917 18681933 5 95 2.5 5.0 3.8 1.0 111 chr3R 18681822 intron CG7708 + chr3R 18681878 intron CG7708 + chr3R 18681933 intron CG7708 + chr3R_5_18680001 chr3R_18680001 RC1_1-HE 2323 chr3R 18695758 18695773 chr3R 18695843 18695858 13 85 14.0 0.0 7.0 1.6 100 chr3R 18695758 3` UTR CG34282 + chr3R 18695808 intergenic CG34282 + chr3R 18695858 intergenic CG34282 + chr3R_13_18695001 chr3R_18695001 RC1_1-HE 2324 chr3R 18703034 18703062 chr3R 18703112 18703140 20 78 2.0 1.0 1.5 8.0 106 chr3R 18703034 intergenic not near genes chr3R 18703087 intergenic not near genes chr3R 18703140 intergenic not near genes chr3R_20_18700001 chr3R_18700001 RC1_1-HE 2325 chr3R 18730030 18730038 chr3R 18730107 18730115 4 77 2.0 8.5 5.2 0.6 85 chr3R 18730030 intron Cha + chr3R 18730072 intron Cha + chr3R 18730115 exon Cha + chr3R_4_18730001 chr3R_18730001 RC1_1-HE 2326 chr3R 18766775 18766810 chr3R 18766854 18766889 15 79 5.5 3.5 4.5 2.7 114 chr3R 18766775 intron CG7720 - chr3R 18766832 intron CG7720 - chr3R 18766889 intron CG7720 - chr3R_15_18765001 chr3R_18765001 RC1_1-HE 2327 chr3R 18775942 18775976 chr3R 18776019 18776053 15 77 2.0 3.5 2.8 3.9 111 chr3R 18775942 intron CG7720 - chr3R 18775998 intron CG7720 - chr3R 18776053 intron CG7720 - chr3R_15_18775001 chr3R_18775001 RC1_1-HE 2328 chr3R 18839810 18839837 chr3R 18839895 18839922 13 85 3.0 3.0 3.0 3.2 112 chr3R 18839810 intron CG18208 - chr3R 18839866 intron CG18208 - chr3R 18839922 intron CG18208 - chr3R_13_18835001 chr3R_18835001 RC1_1-HE 2329 chr3R 18860124 18860145 chr3R 18860211 18860232 8 87 5.0 0.5 2.8 2.1 108 chr3R 18860124 intergenic not near genes chr3R 18860178 intergenic not near genes chr3R 18860232 intergenic not near genes chr3R_8_18860001 chr3R_18860001 RC1_1-HE 2330 chr3R 18910731 18910760 chr3R 18910811 18910840 6 80 0.0 3.0 1.5 2.4 109 chr3R 18910731 3` UTR EndoA + chr3R 18910786 intergenic EndoA +,CG14291 - chr3R 18910840 intergenic EndoA +,CG14291 - chr3R_6_18910001 chr3R_18910001 RC1_1-HE 2331 chr3R 18945646 18945675 chr3R 18945732 18945761 13 85 3.5 5.5 4.5 2.4 115 chr3R 18945646 intron CG42613 + chr3R 18945704 intron CG42613 + chr3R 18945761 intron CG42613 + chr3R_13_18945001 chr3R_18945001 RC1_1-HE 2332 chr3R 19077636 19077646 chr3R 19077707 19077741 5 90 2.0 3.0 2.5 1.4 105 chr3R 19077636 intron cdi - chr3R 19077688 intron cdi - chr3R 19077741 intron cdi - chr3R_5_19075001 chr3R_19075001 RC1_1-HE 2333 chr3R 19148230 19148265 chr3R 19148307 19148342 15 77 1.5 2.5 2.0 5.0 112 chr3R 19148230 intergenic Ppcs -,CG5835 - chr3R 19148286 intergenic CG5835 -,Ppcs - chr3R 19148342 intergenic CG5835 -,Ppcs - chr3R_15_19145001 chr3R_19145001 RC1_1-HE 2334 chr3R 19187679 19187706 chr3R 19187757 19187784 7 78 0.0 4.5 2.2 2.2 105 chr3R 19187679 intron CG31475 + chr3R 19187732 intron CG31475 + chr3R 19187784 intron CG31475 + chr3R_7_19185001 chr3R_19185001 RC1_1-HE 2335 chr3R 19246660 19246686 chr3R 19246743 19246769 5 83 0.0 0.5 0.2 4.2 109 chr3R 19246660 intergenic CG5217 - chr3R 19246714 intergenic CG5217 - chr3R 19246769 intergenic CG5217 - chr3R_5_19245001 chr3R_19245001 RC1_1-HE 2336 chr3R 19263759 19263777 chr3R 19263844 19263861 5 85 2.0 4.0 3.0 1.2 102 chr3R 19263759 intergenic not near genes chr3R 19263810 intergenic not near genes chr3R 19263861 intergenic not near genes chr3R_5_19260001 chr3R_19260001 RC1_1-HE 2337 chr3R 19269317 19269326 chr3R 19269395 19269404 4 78 4.0 2.0 3.0 1.0 87 chr3R 19269317 intergenic not near genes chr3R 19269360 intergenic not near genes chr3R 19269404 intergenic not near genes chr3R_4_19265001 chr3R_19265001 RC1_1-HE 2338 chr3R 19344675 19344700 chr3R 19344811 19344836 8 136 2.5 5.5 4.0 1.6 161 chr3R 19344675 intergenic not near genes chr3R 19344756 intergenic not near genes chr3R 19344836 intergenic not near genes chr3R_8_19340001 chr3R_19340001 RC1_1-HE 2339 chr3R 19370789 19370820 chr3R 19370910 19370938 4 120 0.0 2.0 1.0 2.0 149 chr3R 19370789 intron Ino80 - chr3R 19370864 intron Ino80 - chr3R 19370938 intron Ino80 - chr3R_4_19370001 chr3R_19370001 RC1_1-HE 2340 chr3R 19427298 19427332 chr3R 19427691 19427725 11 390 5.0 2.0 3.5 2.4 427 chr3R 19427298 intron CG31221 + chr3R 19427512 intron CG31221 + chr3R 19427725 intron CG31221 + chr3R_11_19425001 chr3R_19425001 RC1_1-HE 2341 chr3R 19456222 19456256 chr3R 19456303 19456337 24 80 3.5 6.0 4.8 4.1 115 chr3R 19456222 intron CG31221 + chr3R 19456280 intron CG31221 + chr3R 19456337 intron CG31221 + chr3R_24_19455001 chr3R_19455001 RC1_1-HE 2342 chr3R 19497608 19497617 chr3R 19497688 19497697 4 80 8.0 5.0 6.5 0.5 89 chr3R 19497608 intron Dys + chr3R 19497652 intron Dys + chr3R 19497697 intron Dys + chr3R_4_19495001 chr3R_19495001 RC1_1-HE 2343 chr3R 19497618 19497641 chr3R 19497687 19497715 9 78 3.5 5.0 4.2 1.7 97 chr3R 19497618 intron Dys + chr3R 19497666 intron Dys + chr3R 19497715 intron Dys + chr3R_9_19495001 chr3R_19495001 RC1_1-HE 2344 chr3R 19584210 19584237 chr3R 19584687 19584690 10 472 6.5 0.0 3.2 2.4 480 chr3R 19584210 intron Dys + chr3R 19584450 intron Dys + chr3R 19584690 intron Dys + chr3R_10_19580001 chr3R_19580001 RC1_1-HE 2345 chr3R 19590646 19590683 chr3R 19590739 19590769 6 91 0.0 6.0 3.0 1.5 123 chr3R 19590646 intron Dys + chr3R 19590708 intron Dys + chr3R 19590769 exon Dys + chr3R_6_19590001 chr3R_19590001 RC1_1-HE 2346 chr3R 19604676 19604709 chr3R 19604810 19604843 24 134 3.0 4.5 3.8 5.0 167 chr3R 19604676 exon CG7342 + chr3R 19604760 intron CG7342 + chr3R 19604843 intron CG7342 + chr3R_24_19600001 chr3R_19600001 RC1_1-HE 2347 chr3R 19611996 19612014 chr3R 19616028 19616046 5 4032 18.0 17.0 17.5 0.3 4050 chr3R 19611996 exon CG17752 + chr3R 19614021 exon CG16727 + chr3R 19616046 3` UTR CG6231 - chr3R_5_19610001 chr3R_19610001 RC1_1-HE 2348 chr3R 19667990 19668016 chr3R 19668074 19668100 5 84 0.0 2.0 1.0 2.5 110 chr3R 19667990 intron CG7432 + chr3R 19668045 intron CG7432 + chr3R 19668100 intron CG7432 + chr3R_5_19665001 chr3R_19665001 RC1_1-HE 2349 chr3R 19702327 19702355 chr3R 19702410 19702438 8 83 2.5 6.0 4.2 1.5 111 chr3R 19702327 intergenic not near genes chr3R 19702382 intergenic not near genes chr3R 19702438 intergenic not near genes chr3R_8_19700001 chr3R_19700001 RC1_1-HE 2350 chr3R 19716219 19716246 chr3R 19716297 19716324 11 78 4.5 0.0 2.2 3.4 105 chr3R 19716219 intergenic CG34286 - chr3R 19716272 intergenic CG34286 - chr3R 19716324 intergenic CG34286 - chr3R_11_19715001 chr3R_19715001 RC1_1-HE 2351 chr3R 19718924 19718932 chr3R 19719005 19719013 4 81 0.0 9.0 4.5 0.7 89 chr3R 19718924 intergenic not near genes chr3R 19718968 intergenic not near genes chr3R 19719013 intergenic not near genes chr3R_4_19715001 chr3R_19715001 RC1_1-HE 2352 chr3R 19827528 19827540 chr3R 19827615 19827624 7 87 1.5 5.0 3.2 1.7 96 chr3R 19827528 intron bnl - chr3R 19827576 intron bnl - chr3R 19827624 intron bnl - chr3R_7_19825001 chr3R_19825001 RC1_1-HE 2353 chr3R 19848283 19848293 chr3R 19848391 19848401 6 108 0.0 1.0 0.5 4.0 118 chr3R 19848283 intron CG4662 + chr3R 19848342 intron CG4662 + chr3R 19848401 intron CG4662 + chr3R_6_19845001 chr3R_19845001 RC1_1-HE 2354 chr3R 19879466 19879477 chr3R 19879551 19879562 4 85 4.5 2.0 3.2 1.0 96 chr3R 19879466 intergenic Arc42 +,Pk92B + chr3R 19879514 intergenic Pk92B +,Arc42 + chr3R 19879562 intergenic Pk92B +,Arc42 + chr3R_4_19875001 chr3R_19875001 RC1_1-HE 2355 chr3R 19894797 19894830 chr3R 19894874 19894907 7 77 1.0 4.0 2.5 2.0 110 chr3R 19894797 intron CG4733 + chr3R 19894852 intron CG4733 + chr3R 19894907 intron CG4733 + chr3R_7_19890001 chr3R_19890001 RC1_1-HE 2356 chr3R 19997939 19997973 chr3R 19998043 19998078 16 102 6.5 7.0 6.8 2.1 139 chr3R 19997939 intron Hs6st - chr3R 19998008 intron Hs6st - chr3R 19998078 intron Hs6st - chr3R_16_19995001 chr3R_19995001 RC1_1-HE 2357 chr3R 20066114 20066138 chr3R 20066305 20066329 8 191 3.0 3.5 3.2 1.9 215 chr3R 20066114 intergenic not near genes chr3R 20066222 intergenic not near genes chr3R 20066329 intergenic not near genes chr3R_8_20065001 chr3R_20065001 RC1_1-HE 2358 chr3R 20066548 20066584 chr3R 20066785 20066821 12 236 2.0 2.5 2.2 3.8 273 chr3R 20066548 intergenic not near genes chr3R 20066684 intergenic not near genes chr3R 20066821 intergenic not near genes chr3R_12_20065001 chr3R_20065001 RC1_1-HE 2359 chr3R 20108725 20108736 chr3R 20108856 20108867 9 131 1.0 5.0 3.0 2.2 142 chr3R 20108725 intergenic not near genes chr3R 20108796 intergenic not near genes chr3R 20108867 intergenic not near genes chr3R_9_20105001 chr3R_20105001 RC1_1-HE 2360 chr3R 20109539 20109562 chr3R 20114746 20114769 copia 16 5206 5.0 5.0 5.0 2.7 5230 chr3R 20109539 intergenic not near genes chr3R 20112154 intergenic not near genes chr3R 20114769 intergenic CG10887 + chr3R_16_20110001 chr3R_20110001 RC1_1-HE 2361 chr3R 20156691 20156720 chr3R 20165862 20165891 roo 7 9169 5.0 3.0 4.0 1.4 9200 chr3R 20156691 intergenic not near genes chr3R 20161291 intergenic not near genes chr3R 20165891 intergenic not near genes chr3R_7_20160001 chr3R_20160001 RC1_1-HE 2362 chr3R 20180708 20180722 chr3R 20180794 20180808 7 86 4.0 4.0 4.0 1.4 100 chr3R 20180708 intergenic not near genes chr3R 20180758 intergenic not near genes chr3R 20180808 intergenic not near genes chr3R_7_20180001 chr3R_20180001 RC1_1-HE 2363 chr3R 20186873 20186885 chr3R 20186956 20186968 11 83 7.0 9.5 8.2 1.2 95 chr3R 20186873 intergenic not near genes chr3R 20186920 intergenic not near genes chr3R 20186968 intergenic not near genes chr3R_11_20185001 chr3R_20185001 RC1_1-HE 2364 chr3R 20245277 20245301 chr3R 20248888 20248912 F-element 6 3611 0.0 3.0 1.5 2.4 3635 chr3R 20245277 3` UTR Nlg4 + chr3R 20247094 intergenic not near genes chr3R 20248912 intergenic not near genes chr3R_6_20245001 chr3R_20245001 RC1_1-HE 2365 chr3R 20252224 20252251 chr3R 20252303 20252330 7 79 0.0 1.0 0.5 4.7 106 chr3R 20252224 intergenic not near genes chr3R 20252277 intergenic cic + chr3R 20252330 intergenic cic + chr3R_7_20250001 chr3R_20250001 RC1_1-HE 2366 chr3R 20256844 20256871 chr3R 20256923 20256950 17 79 0.0 8.5 4.2 3.3 106 chr3R 20256844 intron cic + chr3R 20256897 intron cic + chr3R 20256950 intron cic + chr3R_17_20255001 chr3R_20255001 RC1_1-HE 2367 chr3R 20260375 20260407 chr3R 20260732 20260764 13 357 4.5 2.0 3.2 3.1 389 chr3R 20260375 intron cic + chr3R 20260570 intron cic + chr3R 20260764 intron cic + chr3R_13_20260001 chr3R_20260001 RC1_1-HE 2368 chr3R 20266513 20266548 chr3R 20272985 20273020 Burdock 20 6471 1.5 6.5 4.0 4.0 6507 chr3R 20266513 intron cic + chr3R 20269766 intron cic + chr3R 20273020 intron cic + chr3R_20_20265001 chr3R_20265001 RC1_1-HE 2369 chr3R 20312856 20312875 chr3R 20312943 20312962 9 86 5.5 2.0 3.8 1.9 106 chr3R 20312856 intron CG42668 + chr3R 20312909 intron CG42668 + chr3R 20312962 intron CG42668 + chr3R_9_20310001 chr3R_20310001 RC1_1-HE 2370 chr3R 20331004 20331027 chr3R 20331491 20331514 roo 8 487 5.0 3.0 4.0 1.6 510 chr3R 20331004 intergenic Sirt2 + chr3R 20331259 intergenic Sirt2 + chr3R 20331514 intergenic not near genes chr3R_8_20330001 chr3R_20330001 RC1_1-HE 2371 chr3R 20506586 20506616 chr3R 20507390 20507419 BS 12 804 3.0 5.0 4.0 2.4 833 chr3R 20506586 intergenic Or92a + chr3R 20507002 intergenic CG4288 - chr3R 20507419 3` UTR CG4288 - chr3R_12_20505001 chr3R_20505001 RC1_1-HE 2372 chr3R 20545976 20546003 chr3R 20546062 20546089 11 86 3.5 3.5 3.5 2.4 113 chr3R 20545976 intron Stat92E - chr3R 20546032 intron Stat92E - chr3R 20546089 intron Stat92E - chr3R_11_20545001 chr3R_20545001 RC1_1-HE 2373 chr3R 20594479 20594500 chr3R 20594570 20594591 8 91 3.0 0.0 1.5 3.2 112 chr3R 20594479 intron bon + chr3R 20594535 intron bon + chr3R 20594591 intron bon + chr3R_8_20590001 chr3R_20590001 RC1_1-HE 2374 chr3R 20703480 20703514 chr3R 20703875 20703909 16 395 5.5 3.5 4.5 2.9 429 chr3R 20703480 intron Oamb - chr3R 20703694 intron Oamb - chr3R 20703909 intron Oamb - chr3R_16_20700001 chr3R_20700001 RC1_1-HE 2375 chr3R 20707748 20707774 chr3R 20707963 20707990 8 214 2.0 5.5 3.8 1.7 242 chr3R 20707748 intron Oamb - chr3R 20707869 intron Oamb - chr3R 20707990 intron Oamb - chr3R_8_20705001 chr3R_20705001 RC1_1-HE 2376 chr3R 20730928 20731060 chr3R 20731029 20731149 14 96 0.0 0.0 0.0 14.0 221 chr3R 20730928 intergenic not near genes chr3R 20731038 intergenic not near genes chr3R 20731149 intergenic CG31205 + chr3R_14_20730001 chr3R_20730001 RC1_1-HE 2377 chr3R 20787437 20787458 chr3R 20787529 20787550 9 92 13.0 8.0 10.5 0.8 113 chr3R 20787437 intron Syp + chr3R 20787494 intron Syp + chr3R 20787550 intron Syp + chr3R_9_20785001 chr3R_20785001 RC1_1-HE 2378 chr3R 20847775 20847801 chr3R 20848013 20848039 11 237 4.5 9.0 6.8 1.4 264 chr3R 20847775 intergenic CG15696 + chr3R 20847907 intergenic CG15696 + chr3R 20848039 intergenic CG15696 + chr3R_11_20845001 chr3R_20845001 RC1_1-HE 2379 chr3R 20850088 20850112 chr3R 20850174 20850198 7 86 2.5 2.0 2.2 2.2 110 chr3R 20850088 intergenic RpS30 + chr3R 20850143 intergenic RpS30 + chr3R 20850198 intergenic RpS30 + chr3R_7_20850001 chr3R_20850001 RC1_1-HE 2380 chr3R 20899911 20899944 chr3R 20900008 20900041 5 97 0.5 1.0 0.8 2.8 130 chr3R 20899911 intergenic not near genes chr3R 20899976 intergenic not near genes chr3R 20900041 intergenic not near genes chr3R_5_20895001 chr3R_20895001 RC1_1-HE 2381 chr3R 20901654 20901686 chr3R 20901758 20901790 8 102 2.5 5.0 3.8 1.7 136 chr3R 20901654 intergenic CG5621 + chr3R 20901722 intergenic CG5621 + chr3R 20901790 intergenic CG5621 + chr3R_8_20900001 chr3R_20900001 RC1_1-HE 2382 chr3R 20916327 20916354 chr3R 20916467 20916494 14 140 6.0 5.5 5.8 2.1 167 chr3R 20916327 intron,intron CG31191 -,hdly + chr3R 20916410 intron,intron CG31191 -,hdly + chr3R 20916494 intron,intron CG31191 -,hdly + chr3R_14_20915001 chr3R_20915001 RC1_1-HE 2383 chr3R 20981621 20981639 chr3R 20982046 20982064 10 425 2.5 3.5 3.0 2.5 443 chr3R 20981621 intron Calx + chr3R 20981842 intron Calx + chr3R 20982064 intron Calx + chr3R_10_20980001 chr3R_20980001 RC1_1-HE 2384 chr3R 20994951 20994979 chr3R 20995038 20995066 5 86 4.0 2.5 3.2 1.2 115 chr3R 20994951 intron Calx + chr3R 20995008 intron Calx + chr3R 20995066 intron Calx + chr3R_5_20995001 chr3R_20995001 RC1_1-HE 2385 chr3R 20994980 20994983 chr3R 20995036 20995064 9 72 3.5 2.5 3.0 2.2 84 chr3R 20994980 intron Calx + chr3R 20995022 intron Calx + chr3R 20995064 intron Calx + chr3R_9_20995001 chr3R_20995001 RC1_1-HE 2386 chr3R 21014016 21014043 chr3R 21014095 21014122 10 78 2.0 6.0 4.0 2.0 106 chr3R 21014016 3` UTR Calx + chr3R 21014069 3` UTR Calx + chr3R 21014122 3` UTR Calx + chr3R_10_21010001 chr3R_21010001 RC1_1-HE 2387 chr3R 21020397 21020421 chr3R 21020474 21020498 8 77 6.0 2.5 4.2 1.5 101 chr3R 21020397 3` UTR Rlip + chr3R 21020448 3` UTR Rlip + chr3R 21020498 3` UTR Rlip + chr3R_8_21020001 chr3R_21020001 RC1_1-HE 2388 chr3R 21041100 21041131 chr3R 21041254 21041285 15 154 3.5 7.0 5.2 2.4 185 chr3R 21041100 exon Dhc93AB - chr3R 21041192 intron Dhc93AB - chr3R 21041285 intron Dhc93AB - chr3R_15_21040001 chr3R_21040001 RC1_1-HE 2389 chr3R 21108037 21108066 chr3R 21108299 21108328 16 262 3.0 5.0 4.0 3.2 291 chr3R 21108037 intergenic Sec15 -,rtet + chr3R 21108182 intergenic Sec15 -,rtet + chr3R 21108328 intergenic rtet +,Sec15 - chr3R_16_21105001 chr3R_21105001 RC1_1-HE 2390 chr3R 21141671 21141691 chr3R 21150153 21150173 Tirant 10 8482 7.5 3.5 5.5 1.5 8502 chr3R 21141671 intron SNF4Agamma + chr3R 21145922 intron SNF4Agamma + chr3R 21150173 intron SNF4Agamma + chr3R_10_21145001 chr3R_21145001 RC1_1-HE 2391 chr3R 21154567 21154585 chr3R 21154756 21154801 7 212 2.5 0.0 1.2 3.2 234 chr3R 21154567 intron SNF4Agamma + chr3R 21154684 intron SNF4Agamma + chr3R 21154801 intron SNF4Agamma + chr3R_7_21150001 chr3R_21150001 RC1_1-HE 2392 chr3R 21176810 21176834 chr3R 21176894 21176918 11 84 4.0 3.0 3.5 2.4 108 chr3R 21176810 intron SNF4Agamma + chr3R 21176864 intron SNF4Agamma + chr3R 21176918 intron SNF4Agamma + chr3R_11_21175001 chr3R_21175001 RC1_1-HE 2393 chr3R 21214721 21214733 chr3R 21214803 21214815 7 82 0.5 0.0 0.2 5.8 94 chr3R 21214721 intergenic CG5862 + chr3R 21214768 intergenic CG5862 + chr3R 21214815 intergenic CG5862 + chr3R_7_21210001 chr3R_21210001 RC1_1-HE 2394 chr3R 21245852 21245864 chr3R 21245937 21245949 5 85 2.0 4.5 3.2 1.2 97 chr3R 21245852 intergenic CG5892 + chr3R 21245900 intergenic CG5892 + chr3R 21245949 intergenic not near genes chr3R_5_21245001 chr3R_21245001 RC1_1-HE 2395 chr3R 21294916 21294931 chr3R 21294996 21295011 4 80 6.0 4.0 5.0 0.7 95 chr3R 21294916 intergenic not near genes chr3R 21294964 intergenic not near genes chr3R 21295011 intergenic not near genes chr3R_4_21290001 chr3R_21290001 RC1_1-HE 2396 chr3R 21330876 21330901 chr3R 21330961 21330993 10 91 1.5 0.0 0.8 5.6 117 chr3R 21330876 intron CG16791 - chr3R 21330934 intron CG16791 - chr3R 21330993 intron CG16791 - chr3R_10_21330001 chr3R_21330001 RC1_1-HE 2397 chr3R 21408859 21408879 chr3R 21408939 21408959 9 80 3.0 9.5 6.2 1.2 100 chr3R 21408859 intergenic CheB93b + chr3R 21408909 intergenic CheB93b + chr3R 21408959 intergenic CheB93b + chr3R_9_21405001 chr3R_21405001 RC1_1-HE 2398 chr3R 21540140 21540161 chr3R 21540323 21540344 8 183 2.0 0.5 1.2 3.6 204 chr3R 21540140 intergenic not near genes chr3R 21540242 intergenic not near genes chr3R 21540344 intergenic not near genes chr3R_8_21540001 chr3R_21540001 RC1_1-HE 2399 chr3R 21545590 21545624 chr3R 21545668 21545702 4 78 6.5 4.0 5.2 0.6 112 chr3R 21545590 intergenic not near genes chr3R 21545646 intergenic not near genes chr3R 21545702 intergenic not near genes chr3R_4_21545001 chr3R_21545001 RC1_1-HE 2400 chr3R 21582996 21583019 chr3R 21583098 21583121 12 102 4.5 4.5 4.5 2.2 125 chr3R 21582996 intron InR - chr3R 21583058 intron InR - chr3R 21583121 intron InR - chr3R_12_21580001 chr3R_21580001 RC1_1-HE 2401 chr3R 21600254 21600278 chr3R 21600333 21600357 11 79 0.0 5.5 2.8 2.9 103 chr3R 21600254 intron InR - chr3R 21600306 intron InR - chr3R 21600357 intron InR - chr3R_11_21600001 chr3R_21600001 RC1_1-HE 2402 chr3R 21609007 21609040 chr3R 21611636 21611649 NOF 14 2630 6.0 6.0 6.0 2.0 2642 chr3R 21609007 intron InR - chr3R 21610328 intron InR - chr3R 21611649 intron InR - chr3R_14_21610001 chr3R_21610001 RC1_1-HE 2403 chr3R 21624101 21624119 chr3R 21624196 21624214 7 95 6.0 6.5 6.2 1.0 113 chr3R 21624101 intron E2f - chr3R 21624158 intron E2f - chr3R 21624214 intron E2f - chr3R_7_21620001 chr3R_21620001 RC1_1-HE 2404 chr3R 21651238 21651269 chr3R 21651317 21651348 15 79 7.0 2.5 4.8 2.6 110 chr3R 21651238 intron E2f - chr3R 21651293 intron E2f - chr3R 21651348 intron E2f - chr3R_15_21650001 chr3R_21650001 RC1_1-HE 2405 chr3R 21666974 21666980 chr3R 21667079 21667085 5 105 0.5 0.0 0.2 4.2 111 chr3R 21666974 intron DNApol-alpha180 - chr3R 21667030 intron DNApol-alpha180 - chr3R 21667085 intron DNApol-alpha180 - chr3R_5_21665001 chr3R_21665001 RC1_1-HE 2406 chr3R 21761127 21761155 chr3R 21768520 21768548 mdg1 9 7393 4.0 5.0 4.5 1.6 7421 chr3R 21761127 exon CG42335 + chr3R 21764838 intron CG42335 + chr3R 21768548 exon CG42335 + chr3R_9_21760001 chr3R_21760001 RC1_1-HE 2407 chr3R 21849967 21849996 chr3R 21850122 21850151 7 155 4.5 1.5 3.0 1.8 184 chr3R 21849967 intergenic not near genes chr3R 21850059 intergenic not near genes chr3R 21850151 intergenic not near genes chr3R_7_21850001 chr3R_21850001 RC1_1-HE 2408 chr3R 21999855 21999884 chr3R 22000035 22000061 8 180 0.5 4.0 2.2 2.5 206 chr3R 21999855 intron Eip93F + chr3R 21999958 intron Eip93F + chr3R 22000061 intron Eip93F + chr3R_8_21995001 chr3R_21995001 RC1_1-HE 2409 chr3R 22083652 22083669 chr3R 22083956 22083973 6 304 2.5 6.0 4.2 1.2 321 chr3R 22083652 intergenic CG13408 + chr3R 22083812 intergenic CG13408 + chr3R 22083973 intergenic CG13408 + chr3R_6_22080001 chr3R_22080001 RC1_1-HE 2410 chr3R 22084617 22084626 chr3R 22084707 22084716 5 90 0.0 5.0 2.5 1.4 99 chr3R 22084617 intergenic not near genes chr3R 22084666 intergenic not near genes chr3R 22084716 intergenic not near genes chr3R_5_22080001 chr3R_22080001 RC1_1-HE 2411 chr3R 22103007 22103022 chr3R 22103090 22103105 6 83 10.5 16.5 13.5 0.4 98 chr3R 22103007 intron CG5778 - chr3R 22103056 intron CG5778 - chr3R 22103105 intron CG5778 - chr3R_6_22100001 chr3R_22100001 RC1_1-HE 2412 chr3R 22142216 22142225 chr3R 22142295 22142304 5 79 5.5 4.0 4.8 0.9 88 chr3R 22142216 5` UTR SKIP + chr3R 22142260 intron SKIP + chr3R 22142304 intron SKIP + chr3R_5_22140001 chr3R_22140001 RC1_1-HE 2413 chr3R 22142805 22142819 chr3R 22142914 22142928 6 108 7.5 13.5 10.5 0.5 123 chr3R 22142805 intron SKIP + chr3R 22142866 intron SKIP + chr3R 22142928 intron SKIP + chr3R_6_22140001 chr3R_22140001 RC1_1-HE 2414 chr3R 22144366 22144383 chr3R 22144511 22144528 10 145 3.0 0.5 1.8 3.6 162 chr3R 22144366 intron SKIP + chr3R 22144447 intron SKIP + chr3R 22144528 intron SKIP + chr3R_10_22140001 chr3R_22140001 RC1_1-HE 2415 chr3R 22156451 22156477 chr3R 22156531 22156557 10 80 0.0 5.0 2.5 2.9 106 chr3R 22156451 intron SKIP + chr3R 22156504 intron SKIP + chr3R 22156557 intron SKIP + chr3R_10_22155001 chr3R_22155001 RC1_1-HE 2416 chr3R 22220632 22220653 chr3R 22220714 22220735 10 82 5.5 3.5 4.5 1.8 103 chr3R 22220632 intron SKIP + chr3R 22220684 intron SKIP + chr3R 22220735 intron SKIP + chr3R_10_22220001 chr3R_22220001 RC1_1-HE 2417 chr3R 22234707 22234715 chr3R 22236027 22236035 pogo 4 1320 0.0 0.0 0.0 4.0 1328 chr3R 22234707 intron SKIP + chr3R 22235371 intron SKIP + chr3R 22236035 intron SKIP + chr3R_4_22235001 chr3R_22235001 RC1_1-HE 2418 chr3R 22239490 22239500 chr3R 22248551 22248561 roo 4 9061 6.0 0.5 3.2 1.0 9071 chr3R 22239490 intron SKIP + chr3R 22244026 intron SKIP + chr3R 22248561 intron SKIP + chr3R_4_22240001 chr3R_22240001 RC1_1-HE 2419 chr3R 22318978 22318999 chr3R 22319055 22319076 9 77 4.0 4.5 4.2 1.7 98 chr3R 22318978 5` UTR CG34377 - chr3R 22319027 intron CG34377 - chr3R 22319076 intron CG34377 - chr3R_9_22315001 chr3R_22315001 RC1_1-HE 2420 chr3R 22450552 22450577 chr3R 22453193 22453218 NOF 10 2639 8.0 9.5 8.8 1.0 2666 chr3R 22450552 intron CG34376 + chr3R 22451885 intron CG34376 + chr3R 22453218 intron CG34376 + chr3R_10_22450001 chr3R_22450001 RC1_1-HE 2421 chr3R 22499370 22499406 chr3R 22499459 22499495 22 88 0.0 4.0 2.0 7.3 125 chr3R 22499370 intron Octbeta1R + chr3R 22499432 intron Octbeta1R + chr3R 22499495 intron Octbeta1R + chr3R_22_22495001 chr3R_22495001 RC1_1-HE 2422 chr3R 22531417 22531450 chr3R 22531494 22531527 14 77 3.5 2.0 2.8 3.7 110 chr3R 22531417 exon CG33093 - chr3R 22531472 exon CG33093 - chr3R 22531527 exon CG33093 - chr3R_14_22530001 chr3R_22530001 RC1_1-HE 2423 chr3R 22591662 22591698 chr3R 22591743 22591779 11 81 3.0 1.5 2.2 3.4 117 chr3R 22591662 intron Efa6 + chr3R 22591720 intron Efa6 + chr3R 22591779 intron Efa6 + chr3R_11_22590001 chr3R_22590001 RC1_1-HE 2424 chr3R 22595677 22595711 chr3R 22595765 22595797 7 87 8.0 0.0 4.0 1.4 120 chr3R 22595677 intron Efa6 + chr3R 22595737 intron Efa6 + chr3R 22595797 intron Efa6 + chr3R_7_22595001 chr3R_22595001 RC1_1-HE 2425 chr3R 22772741 22772754 chr3R 22772829 22772842 4 88 4.5 3.0 3.8 0.8 101 chr3R 22772741 intron,intron CG7029 +,Usp12-46 + chr3R 22772792 intron,intron CG7029 +,Usp12-46 + chr3R 22772842 intron,intron CG7029 +,Usp12-46 + chr3R_4_22770001 chr3R_22770001 RC1_1-HE 2426 chr3R 22809944 22809971 chr3R 22810019 22810048 8 76 4.5 6.5 5.5 1.2 104 chr3R 22809944 intergenic not near genes chr3R 22809996 intergenic not near genes chr3R 22810048 intergenic not near genes chr3R_8_22805001 chr3R_22805001 RC1_1-HE 2427 chr3R 22818132 22818156 chr3R 22818215 22818238 8 83 1.5 5.0 3.2 1.9 106 chr3R 22818132 intergenic not near genes chr3R 22818185 intergenic not near genes chr3R 22818238 intergenic not near genes chr3R_8_22815001 chr3R_22815001 RC1_1-HE 2428 chr3R 22827412 22827441 chr3R 22827489 22827518 15 77 3.5 3.0 3.2 3.6 106 chr3R 22827412 intergenic CR44350 - chr3R 22827465 intergenic CR44350 - chr3R 22827518 intergenic CR44350 - chr3R_15_22825001 chr3R_22825001 RC1_1-HE 2429 chr3R 22860150 22860174 chr3R 22860243 22860267 13 93 2.5 3.0 2.8 3.4 117 chr3R 22860150 intergenic not near genes chr3R 22860208 intergenic not near genes chr3R 22860267 intergenic not near genes chr3R_13_22860001 chr3R_22860001 RC1_1-HE 2430 chr3R 22871432 22871464 chr3R 22871532 22871564 10 100 4.0 3.0 3.5 2.2 132 chr3R 22871432 intergenic not near genes chr3R 22871498 intergenic not near genes chr3R 22871564 intergenic not near genes chr3R_10_22870001 chr3R_22870001 RC1_1-HE 2431 chr3R 22944943 22944953 chr3R 22945022 22945032 5 79 0.0 9.0 4.5 0.9 89 chr3R 22944943 intron klg + chr3R 22944988 intron klg + chr3R 22945032 intron klg + chr3R_5_22940001 chr3R_22940001 RC1_1-HE 2432 chr3R 22960414 22960442 chr3R 22960495 22960522 12 81 3.0 3.0 3.0 3.0 108 chr3R 22960414 3` UTR klg + chr3R 22960468 3` UTR klg + chr3R 22960522 3` UTR klg + chr3R_12_22960001 chr3R_22960001 RC1_1-HE 2433 chr3R 22974294 22974304 chr3R 22974379 22974389 7 85 2.0 3.0 2.5 2.0 95 chr3R 22974294 intergenic not near genes chr3R 22974342 intergenic not near genes chr3R 22974389 intergenic not near genes chr3R_7_22970001 chr3R_22970001 RC1_1-HE 2434 chr3R 23002965 23003002 chr3R 23003044 23003045 9 75 1.5 4.0 2.8 2.4 80 chr3R 23002965 exon CG34375 - chr3R 23003005 exon CG34375 - chr3R 23003045 intron CG34375 - chr3R_9_23000001 chr3R_23000001 RC1_1-HE 2435 chr3R 23064171 23064205 chr3R 23064281 23064315 15 110 2.0 4.0 3.0 3.8 144 chr3R 23064171 exon CG17111 - chr3R 23064243 intron CG17111 - chr3R 23064315 exon CG17111 - chr3R_15_23060001 chr3R_23060001 RC1_1-HE 2436 chr3R 23073651 23073689 chr3R 23073741 23073779 8 88 2.0 2.5 2.2 2.5 128 chr3R 23073651 intron CG13830 - chr3R 23073715 intron CG13830 - chr3R 23073779 intron CG13830 - chr3R_8_23070001 chr3R_23070001 RC1_1-HE 2437 chr3R 23075430 23075450 chr3R 23075514 23075534 13 84 4.5 9.5 7.0 1.6 104 chr3R 23075430 intron CG13830 - chr3R 23075482 intron CG13830 - chr3R 23075534 intron CG13830 - chr3R_13_23075001 chr3R_23075001 RC1_1-HE 2438 chr3R 23079765 23079781 chr3R 23079999 23080015 15 234 7.0 6.0 6.5 2.0 250 chr3R 23079765 intron CG13830 - chr3R 23079890 intron CG13830 - chr3R 23080015 intron CG13830 - chr3R_15_23075001 chr3R_23075001 RC1_1-HE 2439 chr3R 23105800 23105836 chr3R 23105886 23105922 10 86 2.0 4.5 3.2 2.4 122 chr3R 23105800 intron CG13830 - chr3R 23105861 intron CG13830 - chr3R 23105922 intron CG13830 - chr3R_10_23105001 chr3R_23105001 RC1_1-HE 2440 chr3R 23110213 23110230 chr3R 23110294 23110311 11 81 2.5 5.5 4.0 2.2 98 chr3R 23110213 intron CG13830 - chr3R 23110262 intron CG13830 - chr3R 23110311 intron CG13830 - chr3R_11_23110001 chr3R_23110001 RC1_1-HE 2441 chr3R 23169336 23169346 chr3R 23169413 23169423 7 77 1.5 3.0 2.2 2.2 87 chr3R 23169336 intron Irk1 + chr3R 23169380 intron Irk1 + chr3R 23169423 intron Irk1 + chr3R_7_23165001 chr3R_23165001 RC1_1-HE 2442 chr3R 23171787 23171816 chr3R 23171868 23171897 11 81 3.0 4.5 3.8 2.3 110 chr3R 23171787 intron Irk1 + chr3R 23171842 intron Irk1 + chr3R 23171897 intron Irk1 + chr3R_11_23170001 chr3R_23170001 RC1_1-HE 2443 chr3R 23182687 23182706 chr3R 23182771 23182790 5 84 1.5 4.5 3.0 1.2 103 chr3R 23182687 intron Irk1 + chr3R 23182738 intron Irk1 + chr3R 23182790 intron Irk1 + chr3R_5_23180001 chr3R_23180001 RC1_1-HE 2444 chr3R 23185122 23185137 chr3R 23185216 23185218 9 92 3.0 6.5 4.8 1.6 96 chr3R 23185122 3` UTR Irk1 + chr3R 23185170 3` UTR Irk1 + chr3R 23185218 3` UTR Irk1 + chr3R_9_23185001 chr3R_23185001 RC1_1-HE 2445 chr3R 23217171 23217184 chr3R 23217252 23217265 11 81 5.5 2.5 4.0 2.2 94 chr3R 23217171 intron cnc - chr3R 23217218 intron cnc - chr3R 23217265 intron cnc - chr3R_11_23215001 chr3R_23215001 RC1_1-HE 2446 chr3R 23242497 23242505 chr3R 23242607 23242615 4 110 7.5 0.5 4.0 0.8 118 chr3R 23242497 intron CG4467 - chr3R 23242556 intron CG4467 - chr3R 23242615 intron CG4467 - chr3R_4_23240001 chr3R_23240001 RC1_1-HE 2447 chr3R 23245991 23246025 chr3R 23246074 23246108 10 83 2.5 0.0 1.2 4.5 117 chr3R 23245991 intron CG4467 - chr3R 23246050 intron CG4467 - chr3R 23246108 intron CG4467 - chr3R_10_23245001 chr3R_23245001 RC1_1-HE 2448 chr3R 23316975 23317008 chr3R 23317055 23317088 18 80 6.0 6.0 6.0 2.6 113 chr3R 23316975 intron pnt - chr3R 23317032 intron pnt - chr3R 23317088 intron pnt - chr3R_18_23315001 chr3R_23315001 RC1_1-HE 2449 chr3R 23335437 23335464 chr3R 23335516 23335543 8 77 1.0 2.0 1.5 3.2 106 chr3R 23335437 intron pnt - chr3R 23335490 intron pnt - chr3R 23335543 intron pnt - chr3R_8_23335001 chr3R_23335001 RC1_1-HE 2450 chr3R 23492263 23492292 chr3R 23492549 23492578 13 286 2.0 3.0 2.5 3.7 315 chr3R 23492263 intergenic not near genes chr3R 23492420 intergenic not near genes chr3R 23492578 intergenic not near genes chr3R_13_23490001 chr3R_23490001 RC1_1-HE 2451 chr3R 23501927 23501945 chr3R 23502004 23502022 11 77 3.0 4.5 3.8 2.3 95 chr3R 23501927 intergenic not near genes chr3R 23501974 intergenic not near genes chr3R 23502022 intergenic not near genes chr3R_11_23500001 chr3R_23500001 RC1_1-HE 2452 chr3R 23558414 23558429 chr3R 23560196 23560211 Bari1 8 1782 0.0 11.0 5.5 1.2 1797 chr3R 23558414 intron beat-IV + chr3R 23559312 intron beat-IV + chr3R 23560211 intron beat-IV + chr3R_8_23555001 chr3R_23555001 RC1_1-HE 2453 chr3R 23565114 23565119 chr3R 23565191 23565196 6 77 7.0 16.0 11.5 0.5 82 chr3R 23565114 intron beat-IV + chr3R 23565155 intron beat-IV + chr3R 23565196 intron beat-IV + chr3R_6_23565001 chr3R_23565001 RC1_1-HE 2454 chr3R 23629110 23629141 chr3R 23629237 23629239 15 124 5.0 7.5 6.2 2.1 129 chr3R 23629110 intron CG31145 - chr3R 23629174 intron CG31145 - chr3R 23629239 intron CG31145 - chr3R_15_23625001 chr3R_23625001 RC1_1-HE 2455 chr3R 23629815 23629850 chr3R 23629895 23629913 24 78 7.5 5.0 6.2 3.3 98 chr3R 23629815 intron CG31145 - chr3R 23629864 intron CG31145 - chr3R 23629913 intron CG31145 - chr3R_24_23625001 chr3R_23625001 RC1_1-HE 2456 chr3R 23684697 23684728 chr3R 23685184 23685215 roo 17 485 4.5 10.5 7.5 2.0 518 chr3R 23684697 exon CG18754 + chr3R 23684956 intron CG18754 + chr3R 23685215 exon CG18754 + chr3R_17_23680001 chr3R_23680001 RC1_1-HE 2457 chr3R 23744043 23744076 chr3R 23744127 23744160 10 83 2.0 2.5 2.2 3.1 117 chr3R 23744043 intron Hmgcr + chr3R 23744102 intron Hmgcr + chr3R 23744160 intron Hmgcr + chr3R_10_23740001 chr3R_23740001 RC1_1-HE 2458 chr3R 23787516 23787526 chr3R 23787596 23787606 5 80 8.5 5.0 6.8 0.6 90 chr3R 23787516 intron mbc + chr3R 23787561 intron mbc + chr3R 23787606 intron mbc + chr3R_5_23785001 chr3R_23785001 RC1_1-HE 2459 chr3R 23835402 23835435 chr3R 23844553 23844586 roo 11 9151 6.0 6.0 6.0 1.6 9184 chr3R 23835402 intron CG34355 + chr3R 23839994 intron CG34355 + chr3R 23844586 intron CG34355 + chr3R_11_23835001 chr3R_23835001 RC1_1-HE 2460 chr3R 23879092 23879099 chr3R 23879171 23879178 5 79 5.0 0.5 2.8 1.3 86 chr3R 23879092 intron Pli - chr3R 23879135 intron Pli - chr3R 23879178 intron Pli - chr3R_5_23875001 chr3R_23875001 RC1_1-HE 2461 chr3R 23883609 23883638 chr3R 23883697 23883726 14 88 3.0 3.0 3.0 3.5 117 chr3R 23883609 intron Pli - chr3R 23883668 intron Pli - chr3R 23883726 intron Pli - chr3R_14_23880001 chr3R_23880001 RC1_1-HE 2462 chr3R 23888082 23888115 chr3R 23888168 23888202 13 86 2.5 6.0 4.2 2.5 120 chr3R 23888082 intron Pli - chr3R 23888142 intron Pli - chr3R 23888202 intron Pli - chr3R_13_23885001 chr3R_23885001 RC1_1-HE 2463 chr3R 23893777 23893813 chr3R 23893882 23893918 20 105 2.0 7.5 4.8 3.4 141 chr3R 23893777 intergenic tbrd-1 -,sba - chr3R 23893848 intergenic sba -,tbrd-1 - chr3R 23893918 intergenic sba - chr3R_20_23890001 chr3R_23890001 RC1_1-HE 2464 chr3R 23907789 23907823 chr3R 23907878 23907912 16 89 3.0 2.5 2.8 4.2 123 chr3R 23907789 intron sba - chr3R 23907850 intron sba - chr3R 23907912 intron sba - chr3R_16_23905001 chr3R_23905001 RC1_1-HE 2465 chr3R 23915988 23916014 chr3R 23916081 23916107 14 93 8.5 0.0 4.2 2.7 119 chr3R 23915988 intron sba - chr3R 23916048 intron sba - chr3R 23916107 intron sba - chr3R_14_23915001 chr3R_23915001 RC1_1-HE 2466 chr3R 23944909 23944933 chr3R 23944995 23945019 13 86 3.0 5.5 4.2 2.5 110 chr3R 23944909 intron CG12268 - chr3R 23944964 intron CG12268 - chr3R 23945019 exon CG12268 - chr3R_13_23940001 chr3R_23940001 RC1_1-HE 2467 chr3R 23949041 23949069 chr3R 23949119 23949147 14 78 4.5 3.0 3.8 2.9 106 chr3R 23949041 intergenic not near genes chr3R 23949094 intergenic not near genes chr3R 23949147 intergenic not near genes chr3R_14_23945001 chr3R_23945001 RC1_1-HE 2468 chr3R 24024200 24024218 chr3R 24024319 24024337 7 119 5.0 5.0 5.0 1.2 137 chr3R 24024200 intron KrT95D - chr3R 24024268 intron KrT95D - chr3R 24024337 intron KrT95D - chr3R_7_24020001 chr3R_24020001 RC1_1-HE 2469 chr3R 24027965 24028000 chr3R 24028051 24028086 20 86 5.5 4.5 5.0 3.3 121 chr3R 24027965 intron KrT95D - chr3R 24028026 intron KrT95D - chr3R 24028086 intron KrT95D - chr3R_20_24025001 chr3R_24025001 RC1_1-HE 2470 chr3R 24072085 24072118 chr3R 24072524 24072550 jockey 16 438 7.5 8.0 7.8 1.8 465 chr3R 24072085 intron 4EHP - chr3R 24072318 intron 4EHP - chr3R 24072550 intron 4EHP - chr3R_16_24070001 chr3R_24070001 RC1_1-HE 2471 chr3R 24076917 24076937 chr3R 24078383 24078405 hobo 8 1468 5.0 4.0 4.5 1.5 1488 chr3R 24076917 intron 4EHP - chr3R 24077661 intron 4EHP - chr3R 24078405 intron 4EHP - chr3R_8_24075001 chr3R_24075001 RC1_1-HE 2472 chr3R 24079278 24079284 chr3R 24079359 24079365 4 81 2.0 3.5 2.8 1.1 87 chr3R 24079278 intron 4EHP - chr3R 24079322 intron 4EHP - chr3R 24079365 intron 4EHP - chr3R_4_24075001 chr3R_24075001 RC1_1-HE 2473 chr3R 24113972 24113997 chr3R 24114049 24114076 5 79 1.5 3.5 2.5 1.4 104 chr3R 24113972 intron Rootletin + chr3R 24114024 intron Rootletin + chr3R 24114076 intron,3` UTR Rootletin +,CG13607 - chr3R_5_24110001 chr3R_24110001 RC1_1-HE 2474 chr3R 24186123 24186150 chr3R 24186217 24186244 5 94 3.0 0.5 1.8 1.8 121 chr3R 24186123 intergenic CHORD + chr3R 24186184 intergenic CHORD + chr3R 24186244 intergenic CHORD + chr3R_5_24185001 chr3R_24185001 RC1_1-HE 2475 chr3R 24201970 24201993 chr3R 24202060 24202083 14 89 3.0 9.0 6.0 2.0 113 chr3R 24201970 intron twin - chr3R 24202026 intron twin - chr3R 24202083 intron twin - chr3R_14_24200001 chr3R_24200001 RC1_1-HE 2476 chr3R 24207216 24207241 chr3R 24212293 24212318 flea 5 5077 5.0 6.5 5.8 0.7 5102 chr3R 24207216 intron twin - chr3R 24209767 intron twin - chr3R 24212318 intron twin - chr3R_5_24205001 chr3R_24205001 RC1_1-HE 2477 chr3R 24219083 24219104 chr3R 24219186 24219207 5 103 5.5 3.0 4.2 1.0 124 chr3R 24219083 intron twin - chr3R 24219145 intron twin - chr3R 24219207 intron twin - chr3R_5_24215001 chr3R_24215001 RC1_1-HE 2478 chr3R 24377784 24377798 chr3R 24377907 24377921 4 123 2.0 0.0 1.0 2.0 137 chr3R 24377784 intergenic CG33342 + chr3R 24377852 intergenic CG33342 + chr3R 24377921 intergenic CG33342 + chr3R_4_24375001 chr3R_24375001 RC1_1-HE 2479 chr3R 24493281 24493309 chr3R 24493501 24493539 BS 19 229 4.5 7.5 6.0 2.7 258 chr3R 24493281 intergenic not near genes chr3R 24493410 intergenic not near genes chr3R 24493539 intergenic not near genes chr3R_19_24490001 chr3R_24490001 RC1_1-HE 2480 chr3R 24571077 24571096 chr3R 24571226 24571245 9 149 4.5 0.0 2.2 2.8 168 chr3R 24571077 intron CG13624 - chr3R 24571161 intron CG13624 - chr3R 24571245 intron CG13624 - chr3R_9_24570001 chr3R_24570001 RC1_1-HE 2481 chr3R 24579358 24579368 chr3R 24579441 24579451 6 83 5.0 6.0 5.5 0.9 93 chr3R 24579358 intron CG13624 - chr3R 24579404 intron CG13624 - chr3R 24579451 intron CG13624 - chr3R_6_24575001 chr3R_24575001 RC1_1-HE 2482 chr3R 24581493 24581514 chr3R 24581575 24581596 13 82 4.0 5.5 4.8 2.2 103 chr3R 24581493 intron CG13624 - chr3R 24581544 intron CG13624 - chr3R 24581596 intron CG13624 - chr3R_13_24580001 chr3R_24580001 RC1_1-HE 2483 chr3R 24605543 24605554 chr3R 24605648 24605658 4 105 5.5 10.0 7.8 0.5 115 chr3R 24605543 intron mld + chr3R 24605600 intron mld + chr3R 24605658 intron mld + chr3R_4_24605001 chr3R_24605001 RC1_1-HE 2484 chr3R 24624375 24624395 chr3R 24624465 24624480 14 90 0.0 4.5 2.2 4.4 105 chr3R 24624375 intron Syx18 - chr3R 24624428 intron Syx18 - chr3R 24624480 exon Syx18 - chr3R_14_24620001 chr3R_24620001 RC1_1-HE 2485 chr3R 24679819 24680118 chr3R 24679977 24680197 38 139 11.5 5.0 8.2 4.1 378 chr3R 24679819 intron slo + chr3R 24680008 intron slo + chr3R 24680197 intron slo + chr3R_38_24680001 chr3R_24680001 RC1_1-HE 2486 chr3R 24680120 24680144 chr3R 24680190 24680223 19 78 5.0 4.0 4.5 3.5 103 chr3R 24680120 intron slo + chr3R 24680172 intron slo + chr3R 24680223 intron slo + chr3R_19_24680001 chr3R_24680001 RC1_1-HE 2487 chr3R 24730093 24730117 chr3R 24732472 24732496 Doc 6 2379 2.0 0.5 1.2 2.7 2403 chr3R 24730093 intron tok + chr3R 24731294 intron tok + chr3R 24732496 intron tok + chr3R_6_24730001 chr3R_24730001 RC1_1-HE 2488 chr3R 24811910 24811945 chr3R 24812005 24812040 9 95 2.5 2.0 2.2 2.8 130 chr3R 24811910 intron CG5807 - chr3R 24811975 intron CG5807 - chr3R 24812040 intron CG5807 - chr3R_9_24810001 chr3R_24810001 RC1_1-HE 2489 chr3R 24836511 24836548 chr3R 24836588 24836626 12 74 4.5 7.0 5.8 1.8 115 chr3R 24836511 intron sosie + chr3R 24836568 intron sosie + chr3R 24836626 intron sosie + chr3R_12_24835001 chr3R_24835001 RC1_1-HE 2490 chr3R 24893467 24893486 chr3R 24893548 24893567 5 81 1.0 2.0 1.5 2.0 100 chr3R 24893467 intron CG31121 - chr3R 24893517 intron CG31121 - chr3R 24893567 intron CG31121 - chr3R_5_24890001 chr3R_24890001 RC1_1-HE 2491 chr3R 24927120 24927155 chr3R 24931912 24931947 Doc 15 4792 4.0 2.5 3.2 3.6 4827 chr3R 24927120 intergenic Trf4-2 + chr3R 24929534 intergenic not near genes chr3R 24931947 intergenic CG11771 + chr3R_15_24925001 chr3R_24925001 RC1_1-HE 2492 chr3R 24943600 24943635 chr3R 24943677 24943712 17 77 3.0 4.5 3.8 3.5 112 chr3R 24943600 intron ssh - chr3R 24943656 intron ssh - chr3R 24943712 intron ssh - chr3R_17_24940001 chr3R_24940001 RC1_1-HE 2493 chr3R 24952975 24953003 chr3R 24953059 24953086 6 84 0.5 3.0 1.8 2.1 111 chr3R 24952975 intergenic not near genes chr3R 24953030 intergenic not near genes chr3R 24953086 intergenic not near genes chr3R_6_24950001 chr3R_24950001 RC1_1-HE 2494 chr3R 24969629 24969655 chr3R 24969716 24969742 7 87 2.0 0.0 1.0 3.5 113 chr3R 24969629 intergenic not near genes chr3R 24969686 intergenic not near genes chr3R 24969742 intergenic not near genes chr3R_7_24965001 chr3R_24965001 RC1_1-HE 2495 chr3R 24974911 24974936 chr3R 24974991 24975016 8 80 3.0 5.0 4.0 1.6 105 chr3R 24974911 intergenic not near genes chr3R 24974964 intergenic not near genes chr3R 24975016 intergenic not near genes chr3R_8_24970001 chr3R_24970001 RC1_1-HE 2496 chr3R 25085232 25085252 chr3R 25085310 25085330 6 78 0.0 1.5 0.8 3.3 98 chr3R 25085232 intergenic fd96Ca + chr3R 25085281 intergenic fd96Ca + chr3R 25085330 intergenic fd96Ca + chr3R_6_25085001 chr3R_25085001 RC1_1-HE 2497 chr3R 25091628 25091664 chr3R 25091712 25091748 17 83 3.5 5.0 4.2 3.3 120 chr3R 25091628 intergenic not near genes chr3R 25091688 intergenic not near genes chr3R 25091748 intergenic not near genes chr3R_17_25090001 chr3R_25090001 RC1_1-HE 2498 chr3R 25161498 25161512 chr3R 25161602 25161616 9 104 5.0 0.0 2.5 2.6 118 chr3R 25161498 intergenic not near genes chr3R 25161557 intergenic not near genes chr3R 25161616 intergenic not near genes chr3R_9_25160001 chr3R_25160001 RC1_1-HE 2499 chr3R 25289131 25289154 chr3R 25289237 25289250 8 105 2.0 4.0 3.0 2.0 119 chr3R 25289131 intergenic CG13658 + chr3R 25289190 intergenic CG13658 + chr3R 25289250 intergenic CG13658 + chr3R_8_25285001 chr3R_25285001 RC1_1-HE 2500 chr3R 25347047 25347068 chr3R 25347131 25347152 9 84 4.5 1.5 3.0 2.2 105 chr3R 25347047 intergenic tobi -,Fur1 - chr3R 25347100 intergenic tobi -,Fur1 - chr3R 25347152 intergenic tobi -,Fur1 - chr3R_9_25345001 chr3R_25345001 RC1_1-HE 2501 chr3R 25368472 25368505 chr3R 25368591 25368624 24 118 6.5 0.5 3.5 5.3 152 chr3R 25368472 intron Fur1 - chr3R 25368548 intron Fur1 - chr3R 25368624 intron Fur1 - chr3R_24_25365001 chr3R_25365001 RC1_1-HE 2502 chr3R 25505307 25505321 chr3R 25505792 25505806 4 485 1.0 0.0 0.5 2.7 499 chr3R 25505307 intron CG5107 + chr3R 25505556 exon CG5107 + chr3R 25505806 exon CG5107 + chr3R_4_25505001 chr3R_25505001 RC1_1-HE 2503 chr3R 25536313 25536332 chr3R 25536443 25536462 6 130 5.5 1.0 3.2 1.4 149 chr3R 25536313 intron msi + chr3R 25536388 intron msi + chr3R 25536462 intron msi + chr3R_6_25535001 chr3R_25535001 RC1_1-HE 2504 chr3R 25538300 25538307 chr3R 25538379 25538387 5 80 1.0 6.5 3.8 1.0 87 chr3R 25538300 intron msi + chr3R 25538344 intron msi + chr3R 25538387 intron msi + chr3R_5_25535001 chr3R_25535001 RC1_1-HE 2505 chr3R 25544860 25544874 chr3R 25544946 25544972 8 96 5.5 4.0 4.8 1.4 112 chr3R 25544860 intron msi + chr3R 25544916 intron msi + chr3R 25544972 intron msi + chr3R_8_25540001 chr3R_25540001 RC1_1-HE 2506 chr3R 25580285 25580313 chr3R 25580436 25580464 15 151 2.0 3.0 2.5 4.3 179 chr3R 25580285 intron msi + chr3R 25580374 intron msi + chr3R 25580464 intron msi + chr3R_15_25580001 chr3R_25580001 RC1_1-HE 2507 chr3R 25621055 25621076 chr3R 25621132 25621153 11 77 1.0 2.5 1.8 3.9 98 chr3R 25621055 intron Npl4 - chr3R 25621104 intron Npl4 - chr3R 25621153 intron Npl4 - chr3R_11_25620001 chr3R_25620001 RC1_1-HE 2508 chr3R 25629193 25629200 chr3R 25629290 25629297 5 97 2.5 5.0 3.8 1.0 104 chr3R 25629193 intergenic not near genes chr3R 25629245 intergenic not near genes chr3R 25629297 intergenic not near genes chr3R_5_25625001 chr3R_25625001 RC1_1-HE 2509 chr3R 25664613 25664648 chr3R 25664698 25664733 26 85 5.5 6.0 5.8 3.8 120 chr3R 25664613 exon RASSF8 + chr3R 25664673 3` UTR RASSF8 + chr3R 25664733 3` UTR RASSF8 + chr3R_26_25660001 chr3R_25660001 RC1_1-HE 2510 chr3R 25725829 25725860 chr3R 25734990 25735021 roo 9 9160 5.0 5.0 5.0 1.5 9192 chr3R 25725829 intron LpR2 - chr3R 25730425 intron LpR2 - chr3R 25735021 intron LpR2 - chr3R_9_25730001 chr3R_25730001 RC1_1-HE 2511 chr3R 25738649 25738664 chr3R 25738721 25738753 7 87 4.0 4.0 4.0 1.4 104 chr3R 25738649 intron LpR2 - chr3R 25738701 intron LpR2 - chr3R 25738753 intron LpR2 - chr3R_7_25735001 chr3R_25735001 RC1_1-HE 2512 chr3R 25739943 25739973 chr3R 25740035 25740065 15 92 6.0 5.0 5.5 2.3 122 chr3R 25739943 intron LpR2 - chr3R 25740004 intron LpR2 - chr3R 25740065 intron LpR2 - chr3R_15_25740001 chr3R_25740001 RC1_1-HE 2513 chr3R 25832692 25832723 chr3R 25841875 25841906 roo 11 9183 4.0 6.5 5.2 1.8 9214 chr3R 25832692 exon alpha4GT2 + chr3R 25837299 intron alpha4GT2 + chr3R 25841906 exon alpha4GT2 + chr3R_11_25835001 chr3R_25835001 RC1_1-HE 2514 chr3R 25843648 25843666 chr3R 25843779 25843797 11 131 2.0 5.5 3.8 2.3 149 chr3R 25843648 intergenic CR45653 + chr3R 25843722 intergenic CR45653 + chr3R 25843797 intergenic CR45653 + chr3R_11_25840001 chr3R_25840001 RC1_1-HE 2515 chr3R 25871102 25871127 chr3R 25871238 25871263 8 136 4.0 6.5 5.2 1.3 161 chr3R 25871102 3` UTR CG5890 + chr3R 25871182 3` UTR CG5890 + chr3R 25871263 3` UTR CG5890 + chr3R_8_25870001 chr3R_25870001 RC1_1-HE 2516 chr3R 25947856 25947876 chr3R 25947936 25947956 8 80 4.0 4.5 4.2 1.5 100 chr3R 25947856 intron CCAP-R - chr3R 25947906 intron CCAP-R - chr3R 25947956 intron CCAP-R - chr3R_8_25945001 chr3R_25945001 RC1_1-HE 2517 chr3R 25983696 25983721 chr3R 25983795 25983820 9 98 1.0 4.5 2.8 2.4 124 chr3R 25983696 exon Nf1 + chr3R 25983758 intron Nf1 + chr3R 25983820 intron Nf1 + chr3R_9_25980001 chr3R_25980001 RC1_1-HE 2518 chr3R 26038363 26038392 chr3R 26038450 26038478 4 86 3.0 2.0 2.5 1.1 115 chr3R 26038363 intergenic E(spl)m7-HLH + chr3R 26038420 intergenic E(spl)m7-HLH + chr3R 26038478 intergenic E(spl)m7-HLH + chr3R_4_26035001 chr3R_26035001 RC1_1-HE 2519 chr3R 26063317 26063341 chr3R 26063417 26063441 10 100 3.0 2.5 2.8 2.6 124 chr3R 26063317 intergenic CG14551 - chr3R 26063379 intergenic CG14551 - chr3R 26063441 intergenic CG14551 - chr3R_10_26060001 chr3R_26060001 RC1_1-HE 2520 chr3R 26122460 26122478 chr3R 26122537 26122542 7 75 4.0 3.0 3.5 1.6 82 chr3R 26122460 intron CG31324 + chr3R 26122501 intron CG31324 + chr3R 26122542 intron CG31324 + chr3R_7_26120001 chr3R_26120001 RC1_1-HE 2521 chr3R 26140523 26140545 chr3R 26140637 26140659 8 114 2.5 4.0 3.2 1.9 136 chr3R 26140523 intergenic not near genes chr3R 26140591 intergenic not near genes chr3R 26140659 intergenic not near genes chr3R_8_26140001 chr3R_26140001 RC1_1-HE 2522 chr3R 26203050 26203071 chr3R 26203387 26203408 7 337 4.0 4.5 4.2 1.3 358 chr3R 26203050 intron CR44320 + chr3R 26203229 intron CR44320 + chr3R 26203408 intron CR44320 + chr3R_7_26200001 chr3R_26200001 RC1_1-HE 2523 chr3R 26235485 26235522 chr3R 26235568 26235605 14 79 0.5 3.0 1.8 5.0 120 chr3R 26235485 5` UTR CR42745 + chr3R 26235545 5` UTR CR42745 + chr3R 26235605 5` UTR CR42745 + chr3R_14_26235001 chr3R_26235001 RC1_1-HE 2524 chr3R 26261749 26261781 chr3R 26261829 26261861 15 79 2.0 8.0 5.0 2.5 112 chr3R 26261749 intergenic Ald -,CR44321 + chr3R 26261805 intergenic Ald -,CR44321 + chr3R 26261861 intergenic Ald -,CR44321 + chr3R_15_26260001 chr3R_26260001 RC1_1-HE 2525 chr3R 26280136 26280172 chr3R 26280511 26280547 13 375 5.0 3.0 4.0 2.6 411 chr3R 26280136 intergenic not near genes chr3R 26280342 intergenic not near genes chr3R 26280547 intergenic not near genes chr3R_13_26280001 chr3R_26280001 RC1_1-HE 2526 chr3R 26296238 26296264 chr3R 26296328 26296354 7 88 9.0 4.0 6.5 0.9 116 chr3R 26296238 intergenic not near genes chr3R 26296296 intergenic not near genes chr3R 26296354 intergenic not near genes chr3R_7_26295001 chr3R_26295001 RC1_1-HE 2527 chr3R 26316686 26316713 chr3R 26316763 26316769 11 75 2.0 0.5 1.2 5.0 83 chr3R 26316686 intergenic not near genes chr3R 26316728 intergenic not near genes chr3R 26316769 intergenic not near genes chr3R_11_26315001 chr3R_26315001 RC1_1-HE 2528 chr3R 26365110 26365145 chr3R 26365196 26365230 8 86 0.5 4.5 2.5 2.3 120 chr3R 26365110 intergenic not near genes chr3R 26365170 intergenic not near genes chr3R 26365230 intergenic not near genes chr3R_8_26365001 chr3R_26365001 RC1_1-HE 2529 chr3R 26370329 26370362 chr3R 26370414 26370447 11 85 0.0 1.5 0.8 6.1 118 chr3R 26370329 intergenic not near genes chr3R 26370388 intergenic not near genes chr3R 26370447 intergenic not near genes chr3R_11_26370001 chr3R_26370001 RC1_1-HE 2530 chr3R 26376321 26376355 chr3R 26385482 26385516 roo 16 9159 4.0 0.0 2.0 5.3 9195 chr3R 26376321 intergenic not near genes chr3R 26380918 intergenic not near genes chr3R 26385516 intergenic not near genes chr3R_16_26380001 chr3R_26380001 RC1_1-HE 2531 chr3R 26405921 26405928 chr3R 26405998 26406005 4 77 4.0 4.0 4.0 0.8 84 chr3R 26405921 intergenic not near genes chr3R 26405963 intergenic not near genes chr3R 26406005 intergenic not near genes chr3R_4_26405001 chr3R_26405001 RC1_1-HE 2532 chr3R 26412040 26412054 chr3R 26412209 26412223 7 168 4.5 3.0 3.8 1.5 183 chr3R 26412040 intergenic not near genes chr3R 26412132 intergenic not near genes chr3R 26412223 intergenic not near genes chr3R_7_26410001 chr3R_26410001 RC1_1-HE 2533 chr3R 26436643 26436670 chr3R 26436994 26437021 6 351 5.0 4.5 4.8 1.0 378 chr3R 26436643 intergenic not near genes chr3R 26436832 intergenic not near genes chr3R 26437021 intergenic not near genes chr3R_6_26435001 chr3R_26435001 RC1_1-HE 2534 chr3R 26440812 26440842 chr3R 26440897 26440926 12 84 4.5 3.5 4.0 2.4 114 chr3R 26440812 5` UTR tx + chr3R 26440869 5` UTR tx + chr3R 26440926 5` UTR tx + chr3R_12_26440001 chr3R_26440001 RC1_1-HE 2535 chr3R 26442504 26442530 chr3R 26442598 26442624 7 94 2.0 2.5 2.2 2.2 120 chr3R 26442504 intron tx + chr3R 26442564 intron tx + chr3R 26442624 intron tx + chr3R_7_26440001 chr3R_26440001 RC1_1-HE 2536 chr3R 26478906 26478938 chr3R 26478988 26479020 9 81 3.0 5.5 4.2 1.7 114 chr3R 26478906 intron plum - chr3R 26478963 intron plum - chr3R 26479020 intron plum - chr3R_9_26475001 chr3R_26475001 RC1_1-HE 2537 chr3R 26510500 26510533 chr3R 26519562 26519595 roo 12 9062 8.0 8.0 8.0 1.3 9095 chr3R 26510500 intron plum - chr3R 26515048 intron plum - chr3R 26519595 intron,5` UTR plum -,CR45226 + chr3R_12_26515001 chr3R_26515001 RC1_1-HE 2538 chr3R 26558325 26558352 chr3R 26565638 26565665 Stalker4 13 7312 4.5 4.5 4.5 2.4 7340 chr3R 26558325 intron scrib + chr3R 26561995 intron scrib + chr3R 26565665 intron scrib + chr3R_13_26560001 chr3R_26560001 RC1_1-HE 2539 chr3R 26642730 26642753 chr3R 26643124 26643147 jockey 6 394 2.5 2.5 2.5 1.7 417 chr3R 26642730 intergenic not near genes chr3R 26642938 intergenic not near genes chr3R 26643147 intergenic not near genes chr3R_6_26640001 chr3R_26640001 RC1_1-HE 2540 chr3R 26701800 26701830 chr3R 26701890 26701920 14 89 2.5 3.0 2.8 3.7 120 chr3R 26701800 intron amon - chr3R 26701860 intron amon - chr3R 26701920 intron amon - chr3R_14_26700001 chr3R_26700001 RC1_1-HE 2541 chr3R 26740312 26740320 chr3R 26740382 26740397 4 75 0.0 4.0 2.0 1.3 85 chr3R 26740312 intergenic not near genes chr3R 26740354 intergenic not near genes chr3R 26740397 intergenic not near genes chr3R_4_26740001 chr3R_26740001 RC1_1-HE 2542 chr3R 26745015 26745046 chr3R 26745097 26745128 12 81 0.5 4.0 2.2 3.8 113 chr3R 26745015 intergenic not near genes chr3R 26745072 intergenic not near genes chr3R 26745128 intergenic not near genes chr3R_12_26745001 chr3R_26745001 RC1_1-HE 2543 chr3R 26755695 26755728 chr3R 26755772 26755805 12 77 1.5 4.5 3.0 3.0 110 chr3R 26755695 intergenic not near genes chr3R 26755750 intergenic not near genes chr3R 26755805 intergenic not near genes chr3R_12_26755001 chr3R_26755001 RC1_1-HE 2544 chr3R 26770239 26770272 chr3R 26770317 26770350 8 78 5.0 2.5 3.8 1.7 111 chr3R 26770239 intergenic CR45563 + chr3R 26770294 intergenic CR45563 + chr3R 26770350 intergenic not near genes chr3R_8_26770001 chr3R_26770001 RC1_1-HE 2545 chr3R 26781771 26781807 chr3R 26781849 26781885 17 77 2.5 4.5 3.5 3.8 114 chr3R 26781771 intergenic not near genes chr3R 26781828 intergenic not near genes chr3R 26781885 intergenic not near genes chr3R_17_26780001 chr3R_26780001 RC1_1-HE 2546 chr3R 26787803 26787818 chr3R 26787883 26787898 6 80 0.5 6.5 3.5 1.3 95 chr3R 26787803 intergenic not near genes chr3R 26787850 intergenic not near genes chr3R 26787898 intergenic not near genes chr3R_6_26785001 chr3R_26785001 RC1_1-HE 2547 chr3R 26810550 26810584 chr3R 26811036 26811054 roo 13 485 3.5 8.0 5.8 1.9 504 chr3R 26810550 intron Tl + chr3R 26810802 intron Tl + chr3R 26811054 intron Tl + chr3R_13_26810001 chr3R_26810001 RC1_1-HE 2548 chr3R 26825058 26825086 chr3R 26825135 26825163 12 77 3.5 0.0 1.8 4.3 105 chr3R 26825058 intron Tl + chr3R 26825110 intron Tl + chr3R 26825163 intron Tl + chr3R_12_26825001 chr3R_26825001 RC1_1-HE 2549 chr3R 26831768 26831800 chr3R 26831933 26831965 6 165 2.0 3.5 2.8 1.6 197 chr3R 26831768 intron Tl + chr3R 26831866 intron Tl + chr3R 26831965 intron Tl + chr3R_6_26830001 chr3R_26830001 RC1_1-HE 2550 chr3R 26845569 26845605 chr3R 26845650 26845686 23 80 4.0 4.5 4.2 4.4 117 chr3R 26845569 intron Lerp - chr3R 26845628 intron Lerp - chr3R 26845686 intron Lerp - chr3R_23_26845001 chr3R_26845001 RC1_1-HE 2551 chr3R 26849214 26849242 chr3R 26849371 26849399 17 157 4.5 5.0 4.8 2.9 185 chr3R 26849214 intron Lerp - chr3R 26849306 intron Lerp - chr3R 26849399 intron Lerp - chr3R_17_26845001 chr3R_26845001 RC1_1-HE 2552 chr3R 26998237 26998261 chr3R 26998348 26998372 5 111 2.0 3.5 2.8 1.3 135 chr3R 26998237 intron RYa-R + chr3R 26998304 intron RYa-R + chr3R 26998372 intron RYa-R + chr3R_5_26995001 chr3R_26995001 RC1_1-HE 2553 chr3R 27003420 27003446 chr3R 27003504 27003530 13 84 4.5 4.5 4.5 2.4 110 chr3R 27003420 intron,exon RYa-R +,CG6296 - chr3R 27003475 intron,exon RYa-R +,CG6296 - chr3R 27003530 intron,exon RYa-R +,CG6296 - chr3R_13_27000001 chr3R_27000001 RC1_1-HE 2554 chr3R 27007404 27007433 chr3R 27016540 27016569 roo 9 9136 10.0 5.0 7.5 1.1 9165 chr3R 27007404 intron RYa-R + chr3R 27011986 intron RYa-R + chr3R 27016569 intron RYa-R + chr3R_9_27010001 chr3R_27010001 RC1_1-HE 2555 chr3R 27022708 27022734 chr3R 27022820 27022852 11 116 6.5 7.0 6.8 1.4 144 chr3R 27022708 intron,exon RYa-R +,CG6277 - chr3R 27022780 intron,exon RYa-R +,CG6277 - chr3R 27022852 intron,exon RYa-R +,CG6277 - chr3R_11_27020001 chr3R_27020001 RC1_1-HE 2556 chr3R 27027687 27027720 chr3R 27027770 27027802 9 83 0.0 6.5 3.2 2.1 115 chr3R 27027687 intron RYa-R + chr3R 27027744 intron RYa-R + chr3R 27027802 intron RYa-R + chr3R_9_27025001 chr3R_27025001 RC1_1-HE 2557 chr3R 27028723 27028756 chr3R 27028803 27028836 17 80 2.0 3.0 2.5 4.9 113 chr3R 27028723 intron RYa-R + chr3R 27028780 intron RYa-R + chr3R 27028836 intron RYa-R + chr3R_17_27025001 chr3R_27025001 RC1_1-HE 2558 chr3R 27030092 27030106 chr3R 27030355 27030369 7 263 4.5 2.0 3.2 1.7 277 chr3R 27030092 intron RYa-R + chr3R 27030230 intron RYa-R + chr3R 27030369 intron RYa-R + chr3R_7_27030001 chr3R_27030001 RC1_1-HE 2559 chr3R 27140524 27140541 chr3R 27148135 27148152 412 5 7611 1.0 3.0 2.0 1.7 7628 chr3R 27140524 intron CG6051 - chr3R 27144338 intron CG6051 - chr3R 27148152 intron CG6051 - chr3R_5_27140001 chr3R_27140001 RC1_1-HE 2560 chr3R 27218712 27218739 chr3R 27218799 27218826 13 87 1.0 2.0 1.5 5.2 114 chr3R 27218712 intergenic not near genes chr3R 27218769 intergenic not near genes chr3R 27218826 intergenic not near genes chr3R_13_27215001 chr3R_27215001 RC1_1-HE 2561 chr3R 27222483 27222500 chr3R 27222563 27222580 9 80 10.5 3.0 6.8 1.2 97 chr3R 27222483 intergenic not near genes chr3R 27222532 intergenic not near genes chr3R 27222580 intergenic not near genes chr3R_9_27220001 chr3R_27220001 RC1_1-HE 2562 chr3R 27225587 27225602 chr3R 27225679 27225694 5 92 4.0 1.0 2.5 1.4 107 chr3R 27225587 intergenic not near genes chr3R 27225640 intergenic not near genes chr3R 27225694 intergenic not near genes chr3R_5_27225001 chr3R_27225001 RC1_1-HE 2563 chr3R 27248273 27248308 chr3R 27248352 27248386 6 78 2.0 2.5 2.2 1.9 113 chr3R 27248273 3` UTR CG5987 - chr3R 27248330 3` UTR CG5987 - chr3R 27248386 exon CG5987 - chr3R_6_27245001 chr3R_27245001 RC1_1-HE 2564 chr3R 27257040 27257074 chr3R 27257124 27257158 18 84 7.5 3.5 5.5 2.8 118 chr3R 27257040 3` UTR woc - chr3R 27257099 3` UTR woc - chr3R 27257158 3` UTR woc - chr3R_18_27255001 chr3R_27255001 RC1_1-HE 2565 chr3R 27299727 27299735 chr3R 27299810 27299817 4 83 2.5 5.0 3.8 0.8 90 chr3R 27299727 intron CG3339 - chr3R 27299772 intron CG3339 - chr3R 27299817 intron CG3339 - chr3R_4_27295001 chr3R_27295001 RC1_1-HE 2566 chr3R 27300509 27300525 chr3R 27300587 27300603 7 77 3.0 2.0 2.5 2.0 94 chr3R 27300509 intron CG3339 - chr3R 27300556 intron CG3339 - chr3R 27300603 intron CG3339 - chr3R_7_27300001 chr3R_27300001 RC1_1-HE 2567 chr3R 27327425 27327456 chr3R 27327505 27327536 15 80 5.0 4.5 4.8 2.6 111 chr3R 27327425 intergenic not near genes chr3R 27327480 intergenic not near genes chr3R 27327536 intergenic not near genes chr3R_15_27325001 chr3R_27325001 RC1_1-HE 2568 chr3R 27329475 27329500 chr3R 27329553 27329578 5 78 3.5 3.0 3.2 1.2 103 chr3R 27329475 intergenic CG3330 - chr3R 27329526 intergenic CG3330 - chr3R 27329578 intergenic CG3330 - chr3R_5_27325001 chr3R_27325001 RC1_1-HE 2569 chr3R 27342054 27342089 chr3R 27342141 27342176 14 84 3.0 4.0 3.5 3.1 122 chr3R 27342054 intron CG42534 + chr3R 27342115 intron CG42534 + chr3R 27342176 intron CG42534 + chr3R_14_27340001 chr3R_27340001 RC1_1-HE 2570 chr3R 27342790 27342826 chr3R 27351372 27351408 Tirant 20 8582 4.0 3.5 3.8 4.2 8618 chr3R 27342790 intron CG42534 + chr3R 27347099 intron CG42534 + chr3R 27351408 intron CG42534 + chr3R_20_27345001 chr3R_27345001 RC1_1-HE 2571 chr3R 27377470 27377503 chr3R 27377559 27377592 14 87 3.5 4.0 3.8 2.9 122 chr3R 27377470 3` UTR side - chr3R 27377531 3` UTR side - chr3R 27377592 3` UTR side - chr3R_14_27375001 chr3R_27375001 RC1_1-HE 2572 chr3R 27404945 27404959 chr3R 27405023 27405037 9 78 0.0 6.5 3.2 2.1 92 chr3R 27404945 intron side - chr3R 27404991 intron side - chr3R 27405037 intron side - chr3R_9_27400001 chr3R_27400001 RC1_1-HE 2573 chr3R 27473890 27473919 chr3R 27473969 27473998 20 78 8.0 3.5 5.8 2.9 108 chr3R 27473890 intergenic not near genes chr3R 27473944 intergenic not near genes chr3R 27473998 intergenic not near genes chr3R_20_27470001 chr3R_27470001 RC1_1-HE 2574 chr3R 27492379 27492403 chr3R 27492467 27492491 14 88 6.0 1.0 3.5 3.1 112 chr3R 27492379 intergenic not near genes chr3R 27492435 intergenic not near genes chr3R 27492491 intergenic not near genes chr3R_14_27490001 chr3R_27490001 RC1_1-HE 2575 chr3R 27496591 27496602 chr3R 27496697 27496708 6 106 5.5 4.5 5.0 1.0 117 chr3R 27496591 intergenic not near genes chr3R 27496650 intergenic not near genes chr3R 27496708 intergenic not near genes chr3R_6_27495001 chr3R_27495001 RC1_1-HE 2576 chr3R 27571578 27571611 chr3R 27571682 27571715 19 102 2.5 3.5 3.0 4.8 137 chr3R 27571578 intron wdb - chr3R 27571646 intron wdb - chr3R 27571715 intron wdb - chr3R_19_27570001 chr3R_27570001 RC1_1-HE 2577 chr3R 27619061 27619090 chr3R 27619144 27619173 11 82 2.0 8.0 5.0 1.8 112 chr3R 27619061 intron Tusp + chr3R 27619117 intron Tusp + chr3R 27619173 intron Tusp + chr3R_11_27615001 chr3R_27615001 RC1_1-HE 2578 chr3R 27694690 27694712 chr3R 27694767 27694789 5 77 21.0 27.0 24.0 0.2 99 chr3R 27694690 intergenic CG43319 +,Acp98AB + chr3R 27694740 intergenic Acp98AB +,CG43319 + chr3R 27694789 intergenic Acp98AB +,CG43319 +,CG43320 + chr3R_5_27690001 chr3R_27690001 RC1_1-HE 2579 chr3R 27705362 27705391 chr3R 27705443 27705472 10 81 2.5 3.0 2.8 2.6 110 chr3R 27705362 exon CG12428 - chr3R 27705417 intron CG12428 - chr3R 27705472 exon CG12428 - chr3R_10_27705001 chr3R_27705001 RC1_1-HE 2580 chr3R 27716535 27716568 chr3R 27716621 27716654 14 86 3.0 4.5 3.8 2.9 119 chr3R 27716535 intergenic not near genes chr3R 27716594 intergenic not near genes chr3R 27716654 intergenic not near genes chr3R_14_27715001 chr3R_27715001 RC1_1-HE 2581 chr3R 27725562 27725583 chr3R 27731005 27731026 I-element 6 5443 3.0 4.0 3.5 1.3 5464 chr3R 27725562 intergenic not near genes chr3R 27728294 intergenic not near genes chr3R 27731026 intergenic not near genes chr3R_6_27725001 chr3R_27725001 RC1_1-HE 2582 chr3R 27736107 27736131 chr3R 27736184 27736208 12 77 3.0 3.0 3.0 3.0 101 chr3R 27736107 intergenic Ets98B + chr3R 27736158 intergenic Ets98B + chr3R 27736208 intergenic Ets98B + chr3R_12_27735001 chr3R_27735001 RC1_1-HE 2583 chr3R 27760004 27760035 chr3R 27760169 27760200 15 165 3.5 5.0 4.2 2.9 196 chr3R 27760004 intergenic not near genes chr3R 27760102 intergenic not near genes chr3R 27760200 intergenic not near genes chr3R_15_27760001 chr3R_27760001 RC1_1-HE 2584 chr3R 27779270 27779285 chr3R 27779348 27779363 12 78 10.0 9.0 9.5 1.1 93 chr3R 27779270 exon CG34353 - chr3R 27779316 intron CG34353 - chr3R 27779363 intron CG34353 - chr3R_12_27775001 chr3R_27775001 RC1_1-HE 2585 chr3R 27799938 27799963 chr3R 27800021 27800046 10 83 3.0 3.0 3.0 2.5 108 chr3R 27799938 intron CG34353 - chr3R 27799992 intron CG34353 - chr3R 27800046 intron CG34353 - chr3R_10_27795001 chr3R_27795001 RC1_1-HE 2586 chr3R 27840244 27840254 chr3R 27840367 27840377 5 123 5.0 0.5 2.8 1.3 133 chr3R 27840244 intron CG34353 - chr3R 27840310 intron CG34353 - chr3R 27840377 intron CG34353 - chr3R_5_27840001 chr3R_27840001 RC1_1-HE 2587 chr3R 27856757 27856767 chr3R 27858241 27858251 hopper2 5 1484 16.0 6.0 11.0 0.4 1494 chr3R 27856757 intron CG34353 - chr3R 27857504 intron CG34353 - chr3R 27858251 intron CG34353 - chr3R_5_27855001 chr3R_27855001 RC1_1-HE 2588 chr3R 27856772 27856791 chr3R 27858256 27858274 hopper2 9 1484 7.5 12.0 9.8 0.8 1502 chr3R 27856772 intron CG34353 - chr3R 27857523 intron CG34353 - chr3R 27858274 intron CG34353 - chr3R_9_27855001 chr3R_27855001 RC1_1-HE 2589 chr3R 27875700 27875732 chr3R 27882756 27882788 297 13 7056 6.0 7.5 6.8 1.7 7088 chr3R 27875700 intron CG34353 - chr3R 27879244 intron CG34353 - chr3R 27882788 intron CG34353 - chr3R_13_27875001 chr3R_27875001 RC1_1-HE 2590 chr3R 27911809 27911836 chr3R 27911913 27911940 6 104 3.0 2.0 2.5 1.7 131 chr3R 27911809 intergenic not near genes chr3R 27911874 intergenic not near genes chr3R 27911940 intergenic not near genes chr3R_6_27910001 chr3R_27910001 RC1_1-HE 2591 chr3R 27970837 27970848 chr3R 27970928 27970932 5 90 7.5 0.0 3.8 1.0 95 chr3R 27970837 intron betaTub97EF - chr3R 27970884 intron betaTub97EF - chr3R 27970932 intron betaTub97EF - chr3R_5_27970001 chr3R_27970001 RC1_1-HE 2592 chr3R 27973853 27973882 chr3R 27973935 27973964 13 82 4.0 6.5 5.2 2.1 111 chr3R 27973853 intron betaTub97EF - chr3R 27973908 intron betaTub97EF - chr3R 27973964 intron betaTub97EF - chr3R_13_27970001 chr3R_27970001 RC1_1-HE 2593 chr3R 28035491 28035516 chr3R 28035568 28035594 8 78 1.0 7.0 4.0 1.6 103 chr3R 28035491 intron CG34362 + chr3R 28035542 intron CG34362 + chr3R 28035594 intron CG34362 + chr3R_8_28035001 chr3R_28035001 RC1_1-HE 2594 chr3R 28054442 28054453 chr3R 28054519 28054530 7 77 11.0 2.5 6.8 0.9 88 chr3R 28054442 intron CG34362 + chr3R 28054486 intron CG34362 + chr3R 28054530 intron CG34362 + chr3R_7_28050001 chr3R_28050001 RC1_1-HE 2595 chr3R 28054456 28054466 chr3R 28054517 28054543 7 75 8.0 1.5 4.8 1.2 87 chr3R 28054456 intron CG34362 + chr3R 28054500 intron CG34362 + chr3R 28054543 intron CG34362 + chr3R_7_28050001 chr3R_28050001 RC1_1-HE 2596 chr3R 28068489 28068527 chr3R 28073932 28073970 I-element 10 5442 2.5 4.5 3.5 2.2 5481 chr3R 28068489 intron CG34362 + chr3R 28071230 intron CG34362 + chr3R 28073970 intron CG34362 + chr3R_10_28070001 chr3R_28070001 RC1_1-HE 2597 chr3R 28173666 28173703 chr3R 28181102 28181134 mdg1 6 7433 2.5 3.0 2.8 1.6 7468 chr3R 28173666 intron CG34354 + chr3R 28177400 intron CG34354 + chr3R 28181134 intron CG34354 + chr3R_6_28175001 chr3R_28175001 RC1_1-HE 2598 chr3R 28215113 28215134 chr3R 28215231 28215252 8 118 5.0 2.0 3.5 1.8 139 chr3R 28215113 intron CG34354 + chr3R 28215182 intron CG34354 + chr3R 28215252 intron CG34354 + chr3R_8_28215001 chr3R_28215001 RC1_1-HE 2599 chr3R 28223254 28223287 chr3R 28223341 28223374 18 87 5.5 8.0 6.8 2.3 120 chr3R 28223254 intron CG34354 + chr3R 28223314 intron CG34354 + chr3R 28223374 intron CG34354 + chr3R_18_28220001 chr3R_28220001 RC1_1-HE 2600 chr3R 28253337 28253371 chr3R 28255848 28255882 jockey 16 2511 4.0 7.0 5.5 2.5 2545 chr3R 28253337 intergenic not near genes chr3R 28254610 intergenic not near genes chr3R 28255882 intergenic not near genes chr3R_16_28250001 chr3R_28250001 RC1_1-HE 2601 chr3R 28344091 28344094 chr3R 28344139 28344172 4 67 1.0 4.0 2.5 1.1 81 chr3R 28344091 exon Moca-cyp + chr3R 28344132 exon Moca-cyp + chr3R 28344172 exon Moca-cyp + chr3R_4_28340001 chr3R_28340001 RC1_1-HE 2602 chr3R 28345655 28345663 chr3R 28345732 28345740 5 77 4.0 5.0 4.5 0.9 85 chr3R 28345655 intergenic Moca-cyp + chr3R 28345698 intergenic not near genes chr3R 28345740 intergenic not near genes chr3R_5_28345001 chr3R_28345001 RC1_1-HE 2603 chr3R 28411118 28411141 chr3R 28411195 28411218 10 77 2.5 1.5 2.0 3.3 100 chr3R 28411118 intergenic not near genes chr3R 28411168 intergenic not near genes chr3R 28411218 intergenic not near genes chr3R_10_28410001 chr3R_28410001 RC1_1-HE 2604 chr3R 28484353 28484376 chr3R 28486269 28486292 8 1917 24.5 22.0 23.2 0.3 1939 chr3R 28484353 intergenic CG1894 + chr3R 28485322 exon CG1894 + chr3R 28486292 intergenic CG1894 + chr3R_8_28485001 chr3R_28485001 RC1_1-HE 2605 chr3R 28597491 28597520 chr3R 28597569 28597598 7 76 5.5 3.0 4.2 1.3 107 chr3R 28597491 intergenic not near genes chr3R 28597544 intergenic not near genes chr3R 28597598 intergenic Noa36 - chr3R_7_28595001 chr3R_28595001 RC1_1-HE 2606 chr3R 28640290 28640320 chr3R 28640375 28640405 17 85 0.5 5.0 2.8 4.5 115 chr3R 28640290 intergenic not near genes chr3R 28640348 intergenic not near genes chr3R 28640405 intergenic not near genes chr3R_17_28640001 chr3R_28640001 RC1_1-HE 2607 chr3R 28652576 28652597 chr3R 28652657 28652678 4 81 6.5 5.5 6.0 0.6 102 chr3R 28652576 intergenic not near genes chr3R 28652627 intergenic not near genes chr3R 28652678 intergenic not near genes chr3R_4_28650001 chr3R_28650001 RC1_1-HE 2608 chr3R 28742486 28742514 chr3R 28742563 28742591 11 77 5.0 7.0 6.0 1.6 105 chr3R 28742486 intron AstA-R2 - chr3R 28742538 intron AstA-R2 - chr3R 28742591 intron AstA-R2 - chr3R_11_28740001 chr3R_28740001 RC1_1-HE 2609 chr3R 28758283 28758301 chr3R 28763901 28763919 roo 10 5618 8.0 0.0 4.0 2.0 5636 chr3R 28758283 intergenic aqrs - chr3R 28761101 intergenic not near genes chr3R 28763919 intergenic not near genes chr3R_10_28760001 chr3R_28760001 RC1_1-HE 2610 chr3R 28792873 28792894 chr3R 28797969 28797982 jockey 4 5094 2.0 5.5 3.8 0.8 5109 chr3R 28792873 intergenic not near genes chr3R 28795428 intergenic not near genes chr3R 28797982 intergenic not near genes chr3R_4_28795001 chr3R_28795001 RC1_1-HE 2611 chr3R 28960343 28960355 chr3R 28960708 28960720 4 365 3.0 2.5 2.8 1.1 377 chr3R 28960343 intron CG14521 - chr3R 28960532 intron CG14521 - chr3R 28960720 intron CG14521 - chr3R_4_28960001 chr3R_28960001 RC1_1-HE 2612 chr3R 28969583 28969613 chr3R 28969663 28969693 12 80 3.0 5.0 4.0 2.4 110 chr3R 28969583 5` UTR CG14521 - chr3R 28969638 5` UTR CG14521 - chr3R 28969693 5` UTR CG14521 - chr3R_12_28965001 chr3R_28965001 RC1_1-HE 2613 chr3R 29009953 29009987 chr3R 29010060 29010094 15 107 3.0 1.5 2.2 4.7 141 chr3R 29009953 intron wat - chr3R 29010024 intron wat - chr3R 29010094 intron wat - chr3R_15_29010001 chr3R_29010001 RC1_1-HE 2614 chr3R 29012756 29012790 chr3R 29012944 29012978 12 188 4.0 1.0 2.5 3.4 222 chr3R 29012756 intron wat - chr3R 29012867 intron wat - chr3R 29012978 intron wat - chr3R_12_29010001 chr3R_29010001 RC1_1-HE 2615 chr3R 29023185 29023205 chr3R 29023271 29023291 4 86 3.5 0.5 2.0 1.3 106 chr3R 29023185 5` UTR CR45567 + chr3R 29023238 5` UTR CR45567 + chr3R 29023291 5` UTR CR45567 + chr3R_4_29020001 chr3R_29020001 RC1_1-HE 2616 chr3R 29032743 29032776 chr3R 29032821 29032854 11 78 0.0 2.5 1.2 5.0 111 chr3R 29032743 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032798 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032854 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R_11_29030001 chr3R_29030001 RC1_1-HE 2617 chr3R 29079399 29079405 chr3R 29080772 29080778 NOF 6 1373 0.5 4.0 2.2 1.9 1379 chr3R 29079399 intron CG11873 + chr3R 29080088 intron CG11873 + chr3R 29080778 intron CG11873 + chr3R_6_29080001 chr3R_29080001 RC1_1-HE 2618 chr3R 29091433 29091438 chr3R 29091522 29091527 4 88 6.5 23.5 15.0 0.2 94 chr3R 29091433 intron CG11873 + chr3R 29091480 intron CG11873 + chr3R 29091527 intron CG11873 + chr3R_4_29090001 chr3R_29090001 RC1_1-HE 2619 chr3R 29239227 29239245 chr3R 29245519 29245537 4 6292 2.5 11.5 7.0 0.5 6310 chr3R 29239227 exon CG31427 - chr3R 29242382 exon CG31445 - chr3R 29245537 exon SP1029 - chr3R_4_29240001 chr3R_29240001 RC1_1-HE 2620 chr3R 29244223 29244244 chr3R 29244310 29244331 7 87 0.0 3.0 1.5 2.8 108 chr3R 29244223 intron CG31445 - chr3R 29244277 intron CG31445 - chr3R 29244331 intron CG31445 - chr3R_7_29240001 chr3R_29240001 RC1_1-HE 2621 chr3R 29257251 29257283 chr3R 29257335 29257366 16 86 1.0 3.5 2.2 5.0 115 chr3R 29257251 3` UTR CG45544 + chr3R 29257308 3` UTR CG45544 + chr3R 29257366 3` UTR CG45544 + chr3R_16_29255001 chr3R_29255001 RC1_1-HE 2622 chr3R 29290941 29290952 chr3R 29291024 29291035 10 83 9.5 0.0 4.8 1.7 94 chr3R 29290941 intergenic not near genes chr3R 29290988 intergenic not near genes chr3R 29291035 intergenic not near genes chr3R_10_29290001 chr3R_29290001 RC1_1-HE 2623 chr3R 29319828 29319852 chr3R 29320148 29320172 jockey 9 320 5.0 8.0 6.5 1.2 344 chr3R 29319828 intergenic Cnx99A - chr3R 29320000 intergenic Cnx99A - chr3R 29320172 intergenic not near genes chr3R_9_29320001 chr3R_29320001 RC1_1-HE 2624 chr3R 29328564 29328585 chr3R 29328647 29328668 7 83 5.5 4.0 4.8 1.2 104 chr3R 29328564 intergenic not near genes chr3R 29328616 intergenic not near genes chr3R 29328668 intergenic not near genes chr3R_7_29325001 chr3R_29325001 RC1_1-HE 2625 chr3R 29364570 29364599 chr3R 29364676 29364705 6 106 4.0 0.5 2.2 1.9 135 chr3R 29364570 intergenic not near genes chr3R 29364638 intergenic not near genes chr3R 29364705 intergenic not near genes chr3R_6_29360001 chr3R_29360001 RC1_1-HE 2626 chr3R 29376231 29376266 chr3R 29376309 29376344 18 78 4.5 5.5 5.0 3.0 113 chr3R 29376231 intergenic not near genes chr3R 29376288 intergenic not near genes chr3R 29376344 intergenic not near genes chr3R_18_29375001 chr3R_29375001 RC1_1-HE 2627 chr3R 29389354 29389367 chr3R 29389438 29389457 6 86 1.5 3.0 2.2 1.9 103 chr3R 29389354 intron Ptp99A + chr3R 29389406 intron Ptp99A + chr3R 29389457 intron Ptp99A + chr3R_6_29385001 chr3R_29385001 RC1_1-HE 2628 chr3R 29406617 29406651 chr3R 29407904 29407908 jockey 11 1283 2.5 3.5 3.0 2.8 1291 chr3R 29406617 intron Ptp99A + chr3R 29407262 intron Ptp99A + chr3R 29407908 intron Ptp99A + chr3R_11_29405001 chr3R_29405001 RC1_1-HE 2629 chr3R 29430371 29430408 chr3R 29430478 29430515 14 107 2.5 2.5 2.5 4.0 144 chr3R 29430371 intron Ptp99A + chr3R 29430443 intron Ptp99A + chr3R 29430515 intron Ptp99A + chr3R_14_29430001 chr3R_29430001 RC1_1-HE 2630 chr3R 29453751 29453785 chr3R 29453828 29453862 15 77 0.0 4.0 2.0 5.0 111 chr3R 29453751 intron Ptp99A + chr3R 29453806 intron Ptp99A + chr3R 29453862 intron Ptp99A + chr3R_15_29450001 chr3R_29450001 RC1_1-HE 2631 chr3R 29515145 29515159 chr3R 29515237 29515251 4 92 0.0 1.5 0.8 2.2 106 chr3R 29515145 intergenic not near genes chr3R 29515198 intergenic not near genes chr3R 29515251 intergenic CG2014 + chr3R_4_29515001 chr3R_29515001 RC1_1-HE 2632 chr3R 29538051 29538174 chr3R 29538131 29538255 6 81 0.0 0.0 0.0 6.0 204 chr3R 29538051 intergenic not near genes chr3R 29538153 intergenic not near genes chr3R 29538255 intergenic not near genes chr3R_6_29535001 chr3R_29535001 RC1_1-HE 2633 chr3R 29543153 29543164 chr3R 29543246 29543257 4 93 5.5 0.0 2.8 1.1 104 chr3R 29543153 intergenic not near genes chr3R 29543205 intergenic not near genes chr3R 29543257 intergenic not near genes chr3R_4_29540001 chr3R_29540001 RC1_1-HE 2634 chr3R 29543166 29543180 chr3R 29543241 29543273 6 90 3.5 0.0 1.8 2.1 107 chr3R 29543166 intergenic not near genes chr3R 29543220 intergenic not near genes chr3R 29543273 intergenic not near genes chr3R_6_29540001 chr3R_29540001 RC1_1-HE 2635 chr3R 29576741 29576745 chr3R 29576842 29576846 5 101 3.0 0.0 1.5 2.0 105 chr3R 29576741 intergenic not near genes chr3R 29576794 intergenic not near genes chr3R 29576846 intergenic not near genes chr3R_5_29575001 chr3R_29575001 RC1_1-HE 2636 chr3R 29579382 29579408 chr3R 29579468 29579494 17 86 6.0 7.5 6.8 2.2 112 chr3R 29579382 intergenic not near genes chr3R 29579438 intergenic not near genes chr3R 29579494 intergenic not near genes chr3R_17_29575001 chr3R_29575001 RC1_1-HE 2637 chr3R 29583876 29583905 chr3R 29583954 29583983 10 77 3.0 2.0 2.5 2.9 107 chr3R 29583876 intergenic not near genes chr3R 29583930 intergenic not near genes chr3R 29583983 intergenic not near genes chr3R_10_29580001 chr3R_29580001 RC1_1-HE 2638 chr3R 29738270 29738298 chr3R 29739738 29739766 hobo 9 1468 2.0 3.5 2.8 2.4 1496 chr3R 29738270 intergenic CG1969 +,CG7598 + chr3R 29739018 intron CG1969 + chr3R 29739766 5` UTR CG1969 + chr3R_9_29735001 chr3R_29735001 RC1_1-HE 2639 chr3R 29759100 29759105 chr3R 29759520 29759525 4 420 1.0 0.0 0.5 2.7 425 chr3R 29759100 intergenic CR44953 - chr3R 29759312 intergenic CR44953 - chr3R 29759525 intergenic CR44953 - chr3R_4_29755001 chr3R_29755001 RC1_1-HE 2640 chr3R 29760359 29760390 chr3R 29761561 29761592 pogo 12 1202 3.5 3.0 3.2 2.9 1233 chr3R 29760359 intergenic not near genes chr3R 29760976 intergenic not near genes chr3R 29761592 intergenic not near genes chr3R_12_29760001 chr3R_29760001 RC1_1-HE 2641 chr3R 29773874 29773904 chr3R 29773966 29773996 5 92 4.5 0.5 2.5 1.4 122 chr3R 29773874 intron kay + chr3R 29773935 intron kay + chr3R 29773996 intron kay + chr3R_5_29770001 chr3R_29770001 RC1_1-HE 2642 chr3R 29873751 29873767 chr3R 29875746 29875762 7 1996 33.0 33.5 33.2 0.2 2011 chr3R 29873751 exon CG34133 + chr3R 29874756 3` UTR CG34133 + chr3R 29875762 intergenic not near genes chr3R_7_29870001 chr3R_29870001 RC1_1-HE 2643 chr3R 29882023 29882052 chr3R 29891181 29891210 roo 7 9158 2.5 2.0 2.2 2.2 9187 chr3R 29882023 intron CG31038 + chr3R 29886616 intron CG31038 + chr3R 29891210 intron CG31038 + chr3R_7_29885001 chr3R_29885001 RC1_1-HE 2644 chr3R 30032161 30032177 chr3R 30032241 30032257 12 80 7.0 1.5 4.2 2.3 96 chr3R 30032161 intron Axn + chr3R 30032209 intron Axn + chr3R 30032257 intron Axn + chr3R_12_30030001 chr3R_30030001 RC1_1-HE 2645 chr3R 30080589 30080621 chr3R 30080673 30080705 15 84 3.5 2.0 2.8 3.9 116 chr3R 30080589 intron sima + chr3R 30080647 intron sima + chr3R 30080705 intron sima + chr3R_15_30080001 chr3R_30080001 RC1_1-HE 2646 chr3R 30082993 30083022 chr3R 30083070 30083099 9 77 2.0 2.5 2.2 2.8 106 chr3R 30082993 intron sima + chr3R 30083046 intron sima + chr3R 30083099 intron sima + chr3R_9_30080001 chr3R_30080001 RC1_1-HE 2647 chr3R 30084855 30084881 chr3R 30086323 30086349 hobo 7 1468 5.5 6.0 5.8 1.0 1494 chr3R 30084855 intron sima + chr3R 30085602 intron sima + chr3R 30086349 intron sima + chr3R_7_30085001 chr3R_30085001 RC1_1-HE 2648 chr3R 30092387 30092417 chr3R 30092475 30092506 14 89 6.0 4.5 5.2 2.3 119 chr3R 30092387 intron sima + chr3R 30092446 intron sima + chr3R 30092506 intron sima + chr3R_14_30090001 chr3R_30090001 RC1_1-HE 2649 chr3R 30136962 30136980 chr3R 30137042 30137060 8 80 1.5 4.5 3.0 2.0 98 chr3R 30136962 exon AdoR - chr3R 30137011 intron AdoR - chr3R 30137060 intron AdoR - chr3R_8_30135001 chr3R_30135001 RC1_1-HE 2650 chr3R 30210662 30210667 chr3R 30210743 30210748 6 81 0.0 8.5 4.2 1.2 86 chr3R 30210662 intergenic CecA1 +,Anp + chr3R 30210705 intergenic CecA1 +,Anp + chr3R 30210748 intergenic CecA1 +,Anp + chr3R_6_30210001 chr3R_30210001 RC1_1-HE 2651 chr3R 30238758 30238796 chr3R 30239923 30239961 1360 8 1165 0.0 0.0 0.0 8.0 1203 chr3R 30238758 intergenic not near genes chr3R 30239360 intergenic not near genes chr3R 30239961 intergenic not near genes chr3R_8_30235001 chr3R_30235001 RC1_1-HE 2652 chr3R 30252333 30252340 chr3R 30252681 30252688 6 348 35.0 37.5 36.2 0.2 355 chr3R 30252333 exon CG9682 + chr3R 30252510 exon CG9682 + chr3R 30252688 exon CG9682 + chr3R_6_30250001 chr3R_30250001 RC1_1-HE 2653 chr3R 30269637 30269671 chr3R 30269721 30269755 11 84 1.0 5.5 3.2 2.6 118 chr3R 30269637 intergenic not near genes chr3R 30269696 intergenic not near genes chr3R 30269755 intergenic not near genes chr3R_11_30265001 chr3R_30265001 RC1_1-HE 2654 chr3R 30292862 30292884 chr3R 30293810 30293832 4 948 4.5 7.0 5.8 0.6 970 chr3R 30292862 intron hdc + chr3R 30293347 intron hdc + chr3R 30293832 intron hdc + chr3R_4_30290001 chr3R_30290001 RC1_1-HE 2655 chr3R 30317325 30317349 chr3R 30324918 30324942 roo 4 7593 3.0 0.5 1.8 1.4 7617 chr3R 30317325 intron hdc + chr3R 30321134 intron hdc + chr3R 30324942 intron hdc + chr3R_4_30320001 chr3R_30320001 RC1_1-HE 2656 chr3R 30330492 30330495 chr3R 30330573 30330576 5 80 11.0 5.0 8.0 0.6 84 chr3R 30330492 intron hdc + chr3R 30330534 intron hdc + chr3R 30330576 intron hdc + chr3R_5_30330001 chr3R_30330001 RC1_1-HE 2657 chr3R 30330497 30330525 chr3R 30330570 30330606 18 78 3.0 4.0 3.5 4.0 109 chr3R 30330497 intron hdc + chr3R 30330552 intron hdc + chr3R 30330606 intron hdc + chr3R_18_30330001 chr3R_30330001 RC1_1-HE 2658 chr3R 30347030 30347035 chr3R 30347115 30347120 6 86 15.5 16.0 15.8 0.4 90 chr3R 30347030 intron hdc + chr3R 30347075 intron hdc + chr3R 30347120 intron hdc + chr3R_6_30345001 chr3R_30345001 RC1_1-HE 2659 chr3R 30396216 30396245 chr3R 30404483 30404512 roo 9 8266 4.0 3.0 3.5 2.0 8296 chr3R 30396216 intergenic not near genes chr3R 30400364 intergenic not near genes chr3R 30404512 5` UTR CR45570 + chr3R_9_30400001 chr3R_30400001 RC1_1-HE 2660 chr3R 30413442 30413463 chr3R 30413526 30413530 7 81 5.5 6.0 5.8 1.0 88 chr3R 30413442 intergenic not near genes chr3R 30413486 intergenic not near genes chr3R 30413530 intergenic not near genes chr3R_7_30410001 chr3R_30410001 RC1_1-HE 2661 chr3R 30422937 30422973 chr3R 30423036 30423072 9 99 2.0 2.0 2.0 3.0 135 chr3R 30422937 5` UTR,5` UTR CG2217 -,CG42740 - chr3R 30423004 intergenic CG15535 -,CG2217 -,CG42740 - chr3R 30423072 3` UTR CG15535 - chr3R_9_30420001 chr3R_30420001 RC1_1-HE 2662 chr3R 30461493 30461518 chr3R 30461611 30461636 7 118 4.5 5.5 5.0 1.2 143 chr3R 30461493 intron CDase + chr3R 30461564 intron CDase + chr3R 30461636 intron CDase + chr3R_7_30460001 chr3R_30460001 RC1_1-HE 2663 chr3R 30467053 30467083 chr3R 30467134 30467164 15 81 4.0 5.5 4.8 2.6 111 chr3R 30467053 intron PH4alphaEFB + chr3R 30467108 intron PH4alphaEFB + chr3R 30467164 intron PH4alphaEFB + chr3R_15_30465001 chr3R_30465001 RC1_1-HE 2664 chr3R 30480475 30480509 chr3R 30482944 30482978 jockey 8 2469 5.0 2.0 3.5 1.8 2503 chr3R 30480475 intron PH4alphaEFB + chr3R 30481726 intron PH4alphaEFB + chr3R 30482978 intron PH4alphaEFB + chr3R_8_30480001 chr3R_30480001 RC1_1-HE 2665 chr3R 30498405 30498435 chr3R 30498606 30498636 8 201 0.0 1.0 0.5 5.3 231 chr3R 30498405 intron PH4alphaNE1 - chr3R 30498520 intron PH4alphaNE1 - chr3R 30498636 intron PH4alphaNE1 - chr3R_8_30495001 chr3R_30495001 RC1_1-HE 2666 chr3R 30549010 30549034 chr3R 30549103 30549127 8 93 4.0 4.0 4.0 1.6 117 chr3R 30549010 intron tmod + chr3R 30549068 intron tmod + chr3R 30549127 intron tmod + chr3R_8_30545001 chr3R_30545001 RC1_1-HE 2667 chr3R 30566100 30566130 chr3R 30566177 30566207 14 77 2.0 4.0 3.0 3.5 107 chr3R 30566100 intron tmod + chr3R 30566154 intron tmod + chr3R 30566207 intron tmod + chr3R_14_30565001 chr3R_30565001 RC1_1-HE 2668 chr3R 30620825 30620858 chr3R 30620905 30620939 18 81 2.5 4.0 3.2 4.3 114 chr3R 30620825 intron CG44954 - chr3R 30620882 intron CG44954 - chr3R 30620939 intron CG44954 - chr3R_18_30620001 chr3R_30620001 RC1_1-HE 2669 chr3R 30627602 30627637 chr3R 30627683 30627718 11 81 5.0 4.5 4.8 1.9 116 chr3R 30627602 3` UTR CG2267 - chr3R 30627660 exon CG2267 - chr3R 30627718 exon CG2267 - chr3R_11_30625001 chr3R_30625001 RC1_1-HE 2670 chr3R 30645909 30645936 chr3R 30645992 30646019 8 83 2.0 4.0 3.0 2.0 110 chr3R 30645909 intergenic CG31013 -,PH4alphaPV - chr3R 30645964 intergenic CG31013 -,PH4alphaPV - chr3R 30646019 intergenic PH4alphaPV -,CG31013 - chr3R_8_30645001 chr3R_30645001 RC1_1-HE 2671 chr3R 30679516 30679550 chr3R 30686986 30687020 blood 6 7470 4.5 4.0 4.2 1.2 7504 chr3R 30679516 intergenic not near genes chr3R 30683268 intergenic not near genes chr3R 30687020 intergenic not near genes chr3R_6_30680001 chr3R_30680001 RC1_1-HE 2672 chr3R 30799822 30799853 chr3R 30799935 30799966 12 113 3.0 6.0 4.5 2.2 144 chr3R 30799822 intron wts - chr3R 30799894 intron wts - chr3R 30799966 intron wts - chr3R_12_30795001 chr3R_30795001 RC1_1-HE 2673 chr3R 30812590 30812626 chr3R 30812677 30812713 13 87 1.5 3.0 2.2 4.1 123 chr3R 30812590 intron cindr + chr3R 30812652 intron cindr + chr3R 30812713 intron cindr + chr3R_13_30810001 chr3R_30810001 RC1_1-HE 2674 chr3R 30818809 30818845 chr3R 30820374 30820411 1360 14 1566 3.5 2.5 3.0 3.5 1602 chr3R 30818809 intron cindr + chr3R 30819610 intron cindr + chr3R 30820411 intron cindr + chr3R_14_30815001 chr3R_30815001 RC1_1-HE 2675 chr3R 30859410 30859426 chr3R 30859489 30859505 6 79 2.5 1.0 1.8 2.1 95 chr3R 30859410 intergenic not near genes chr3R 30859458 intergenic not near genes chr3R 30859505 intergenic not near genes chr3R_6_30855001 chr3R_30855001 RC1_1-HE 2676 chr3R 30881525 30881551 chr3R 30881606 30881632 10 81 0.5 7.5 4.0 2.0 107 chr3R 30881525 intergenic CG15547 -,CG12071 - chr3R 30881578 intergenic CG15547 - chr3R 30881632 intergenic CG15547 - chr3R_10_30880001 chr3R_30880001 RC1_1-HE 2677 chr3R 30898244 30898261 chr3R 30898331 30898348 6 87 0.0 7.5 3.8 1.2 104 chr3R 30898244 intron Cyp4c3 + chr3R 30898296 intron Cyp4c3 + chr3R 30898348 intron Cyp4c3 + chr3R_6_30895001 chr3R_30895001 RC1_1-HE 2678 chr3R 30994122 30994151 chr3R 30994233 30994236 14 109 3.0 0.0 1.5 5.6 114 chr3R 30994122 intron 5-HT7 - chr3R 30994179 intron 5-HT7 - chr3R 30994236 intron 5-HT7 - chr3R_14_30990001 chr3R_30990001 RC1_1-HE 2679 chr3R 31023475 31023509 chr3R 31023557 31023590 9 81 5.0 4.5 4.8 1.6 115 chr3R 31023475 intergenic not near genes chr3R 31023532 intergenic not near genes chr3R 31023590 intergenic not near genes chr3R_9_31020001 chr3R_31020001 RC1_1-HE 2680 chr3R 31074228 31074246 chr3R 31081827 31081845 springer 4 7599 4.5 5.0 4.8 0.7 7617 chr3R 31074228 intron Sox100B + chr3R 31078036 intron Sox100B + chr3R 31081845 intron Sox100B + chr3R_4_31075001 chr3R_31075001 RC1_1-HE 2681 chr3R 31084906 31084935 chr3R 31084983 31085012 8 77 1.5 3.0 2.2 2.5 106 chr3R 31084906 intergenic not near genes chr3R 31084959 intergenic not near genes chr3R 31085012 intergenic not near genes chr3R_8_31080001 chr3R_31080001 RC1_1-HE 2682 chr3R 31112998 31113026 chr3R 31113632 31113660 5 634 1.5 3.0 2.2 1.6 662 chr3R 31112998 intergenic not near genes chr3R 31113329 intergenic not near genes chr3R 31113660 intergenic not near genes chr3R_5_31110001 chr3R_31110001 RC1_1-HE 2683 chr3R 31131014 31131026 chr3R 31131113 31131125 5 99 1.5 4.5 3.0 1.2 111 chr3R 31131014 intergenic CG15556 - chr3R 31131070 intergenic CG15556 - chr3R 31131125 intergenic CG15556 - chr3R_5_31130001 chr3R_31130001 RC1_1-HE 2684 chr3R 31183886 31183921 chr3R 31183967 31184002 14 78 2.0 3.5 2.8 3.7 116 chr3R 31183886 intron mesh - chr3R 31183944 intron mesh - chr3R 31184002 intron mesh - chr3R_14_31180001 chr3R_31180001 RC1_1-HE 2685 chr3R 31260234 31260267 chr3R 31260324 31260357 11 90 3.5 2.5 3.0 2.8 123 chr3R 31260234 intergenic CG18672 +,CG3669 + chr3R 31260296 5` UTR CG18672 + chr3R 31260357 5` UTR CG18672 + chr3R_11_31260001 chr3R_31260001 RC1_1-HE 2686 chr3R 31279375 31279409 chr3R 31285567 31285601 diver 12 6192 4.5 5.0 4.8 2.1 6226 chr3R 31279375 intergenic not near genes chr3R 31282488 intergenic not near genes chr3R 31285601 intergenic not near genes chr3R_12_31280001 chr3R_31280001 RC1_1-HE 2687 chr3R 31413090 31413121 chr3R 31418291 31418322 copia 9 5201 4.0 3.0 3.5 2.0 5232 chr3R 31413090 intron Gprk2 + chr3R 31415706 intron Gprk2 + chr3R 31418322 intron Gprk2 + chr3R_9_31415001 chr3R_31415001 RC1_1-HE 2688 chr3R 31426886 31426913 chr3R 31426979 31427006 9 93 4.0 2.0 3.0 2.2 120 chr3R 31426886 intron Gprk2 + chr3R 31426946 intron Gprk2 + chr3R 31427006 intron Gprk2 + chr3R_9_31425001 chr3R_31425001 RC1_1-HE 2689 chr3R 31435360 31435379 chr3R 31435513 31435532 6 153 13.0 5.0 9.0 0.6 172 chr3R 31435360 intron Gprk2 + chr3R 31435446 intron Gprk2 + chr3R 31435532 intron Gprk2 + chr3R_6_31435001 chr3R_31435001 RC1_1-HE 2690 chr3R 31442268 31442296 chr3R 31442354 31442382 19 86 3.5 9.0 6.2 2.6 114 chr3R 31442268 intron Gprk2 + chr3R 31442325 intron Gprk2 + chr3R 31442382 intron Gprk2 + chr3R_19_31440001 chr3R_31440001 RC1_1-HE 2691 chr3R 31443412 31443442 chr3R 31443502 31443532 10 88 4.5 4.0 4.2 1.9 120 chr3R 31443412 intron Gprk2 + chr3R 31443472 intron Gprk2 + chr3R 31443532 intron Gprk2 + chr3R_10_31440001 chr3R_31440001 RC1_1-HE 2692 chr3R 31448603 31448627 chr3R 31448680 31448704 7 74 7.5 8.5 8.0 0.8 101 chr3R 31448603 intron Gprk2 + chr3R 31448654 intron Gprk2 + chr3R 31448704 intron Gprk2 + chr3R_7_31445001 chr3R_31445001 RC1_1-HE 2693 chr3R 31530814 31530836 chr3R 31531142 31531164 6 325 3.5 2.5 3.0 1.5 350 chr3R 31530814 intergenic not near genes chr3R 31530989 intergenic not near genes chr3R 31531164 intergenic not near genes chr3R_6_31530001 chr3R_31530001 RC1_1-HE 2694 chr3R 31608846 31608881 chr3R 31608944 31608979 24 98 7.5 6.0 6.8 3.1 133 chr3R 31608846 intron CycG - chr3R 31608912 intron CycG - chr3R 31608979 intron CycG - chr3R_24_31605001 chr3R_31605001 RC1_1-HE 2695 chr3R 31610116 31610147 chr3R 31610203 31610234 11 87 2.5 4.0 3.2 2.6 118 chr3R 31610116 intron CycG - chr3R 31610175 intron CycG - chr3R 31610234 intron CycG - chr3R_11_31610001 chr3R_31610001 RC1_1-HE 2696 chr3R 31633027 31633063 chr3R 31633110 31633146 25 83 6.5 9.5 8.0 2.8 119 chr3R 31633027 intron kek6 + chr3R 31633086 intron kek6 + chr3R 31633146 intron kek6 + chr3R_25_31630001 chr3R_31630001 RC1_1-HE 2697 chr3R 31656234 31656260 chr3R 31656316 31656342 17 82 4.0 5.0 4.5 3.1 108 chr3R 31656234 intron kek6 + chr3R 31656288 intron kek6 + chr3R 31656342 intron kek6 + chr3R_17_31655001 chr3R_31655001 RC1_1-HE 2698 chr3R 31691530 31691562 chr3R 31696297 31696329 Doc 7 4767 3.0 2.5 2.8 1.8 4799 chr3R 31691530 intergenic not near genes chr3R 31693930 intergenic not near genes chr3R 31696329 intergenic not near genes chr3R_7_31690001 chr3R_31690001 RC1_1-HE 2699 chr3R 31817278 31817296 chr3R 31817597 31817615 13 319 4.5 4.5 4.5 2.4 337 chr3R 31817278 intron RhoGAP100F + chr3R 31817446 intron RhoGAP100F + chr3R 31817615 intron RhoGAP100F + chr3R_13_31815001 chr3R_31815001 RC1_1-HE 2700 chr3R 31870575 31870582 chr3R 31871071 31871078 6 496 5.5 5.5 5.5 0.9 503 chr3R 31870575 intron heph - chr3R 31870826 intron heph - chr3R 31871078 intron heph - chr3R_6_31870001 chr3R_31870001 RC1_1-HE 2701 chr3R 31878605 31878642 chr3R 31878685 31878722 13 79 5.0 3.0 4.0 2.6 117 chr3R 31878605 intron heph - chr3R 31878664 intron heph - chr3R 31878722 intron heph - chr3R_13_31875001 chr3R_31875001 RC1_1-HE 2702 chr3R 31918036 31918048 chr3R 31918129 31918141 5 93 5.0 9.0 7.0 0.6 105 chr3R 31918036 intron heph - chr3R 31918088 intron heph - chr3R 31918141 intron heph - chr3R_5_31915001 chr3R_31915001 RC1_1-HE 2703 chr3R 31918435 31918462 chr3R 31918517 31918544 9 82 3.5 2.5 3.0 2.2 109 chr3R 31918435 intron heph - chr3R 31918490 intron heph - chr3R 31918544 intron heph - chr3R_9_31915001 chr3R_31915001 RC1_1-HE 2704 chr3R 31930560 31930591 chr3R 31930643 31930674 12 81 6.0 5.5 5.8 1.8 114 chr3R 31930560 intron heph - chr3R 31930617 intron heph - chr3R 31930674 intron heph - chr3R_12_31930001 chr3R_31930001 RC1_1-HE 2705 chr3R 31931203 31931216 chr3R 31931287 31931300 5 84 3.5 6.0 4.8 0.9 97 chr3R 31931203 intron heph - chr3R 31931252 intron heph - chr3R 31931300 intron heph - chr3R_5_31930001 chr3R_31930001 RC1_1-HE 2706 chr3R 31948671 31948696 chr3R 31948751 31948776 20 80 1.5 9.0 5.2 3.2 105 chr3R 31948671 intron heph - chr3R 31948724 intron heph - chr3R 31948776 intron heph - chr3R_20_31945001 chr3R_31945001 RC1_1-HE 2707 chr3R 31952637 31952651 chr3R 31952742 31952756 8 105 9.5 2.5 6.0 1.1 119 chr3R 31952637 intron heph - chr3R 31952696 intron heph - chr3R 31952756 intron heph - chr3R_8_31950001 chr3R_31950001 RC1_1-HE 2708 chr3R 31952652 31952671 chr3R 31952741 31952776 11 104 6.5 2.5 4.5 2.0 124 chr3R 31952652 intron heph - chr3R 31952714 intron heph - chr3R 31952776 intron heph - chr3R_11_31950001 chr3R_31950001 RC1_1-HE 2709 chr3R 31953085 31953123 chr3R 31953174 31953212 22 88 6.5 4.5 5.5 3.4 127 chr3R 31953085 intron heph - chr3R 31953148 intron heph - chr3R 31953212 intron heph - chr3R_22_31950001 chr3R_31950001 RC1_1-HE 2710 chr3R 31965934 31965973 chr3R 31966015 31966054 13 77 7.0 6.5 6.8 1.7 120 chr3R 31965934 intron heph - chr3R 31965994 intron heph - chr3R 31966054 intron heph - chr3R_13_31965001 chr3R_31965001 RC1_1-HE 2711 chr3R 31986247 31986260 chr3R 31986710 31986723 4 462 2.5 2.5 2.5 1.1 476 chr3R 31986247 intron,intron heph -,CG2003 + chr3R 31986485 intron,intron heph -,CG2003 + chr3R 31986723 intron,intron heph -,CG2003 + chr3R_4_31985001 chr3R_31985001 RC1_1-HE 2712 chr3R 31991102 31991137 chr3R 31991182 31991217 19 80 5.0 5.0 5.0 3.2 115 chr3R 31991102 intron heph - chr3R 31991160 intron heph - chr3R 31991217 intron heph - chr3R_19_31990001 chr3R_31990001 RC1_1-HE 2713 chr3R 31997991 31998024 chr3R 32005462 32005495 blood 12 7471 5.5 5.5 5.5 1.8 7504 chr3R 31997991 intron heph - chr3R 32001743 intron heph - chr3R 32005495 intron heph - chr3R_12_32000001 chr3R_32000001 RC1_1-HE 2714 chr3R 32009970 32010005 chr3R 32010332 32010367 15 362 1.0 4.5 2.8 3.9 397 chr3R 32009970 intron heph - chr3R 32010168 intron heph - chr3R 32010367 intron heph - chr3R_15_32010001 chr3R_32010001 RC1_1-HE 2715 chr3R 32022326 32022356 chr3R 32022429 32022459 24 103 7.0 10.0 8.5 2.5 133 chr3R 32022326 5` UTR CR45557 + chr3R 32022392 5` UTR CR45557 + chr3R 32022459 5` UTR CR45557 + chr3R_24_32020001 chr3R_32020001 RC1_1-HE 2716 chr3R 32033757 32033776 chr3R 32033843 32033859 7 86 6.0 3.5 4.8 1.2 102 chr3R 32033757 intergenic not near genes chr3R 32033808 intergenic not near genes chr3R 32033859 intergenic not near genes chr3R_7_32030001 chr3R_32030001 RC1_1-HE 2717 chr3R 32045572 32045599 chr3R 32045654 32045681 10 82 5.5 2.5 4.0 2.0 109 chr3R 32045572 3` UTR krz - chr3R 32045626 3` UTR krz - chr3R 32045681 3` UTR krz - chr3R_10_32045001 chr3R_32045001 RC1_1-HE 2718 chr4 76495 76509 chr4 81932 81953 I-element 9 5441 2.5 3.0 2.8 2.4 5458 chr4 76495 intron pan + chr4 79224 intron pan + chr4 81953 intron pan + chr4_9_75001 chr4_75001 RC1_1-HE 2719 chr4 97198 97227 chr4 97279 97309 5 82 1.5 0.0 0.8 2.8 111 chr4 97198 intron pan + chr4 97254 intron pan + chr4 97309 intron pan + chr4_5_95001 chr4_95001 RC1_1-HE 2720 chr4 250860 250890 chr4 250944 250974 7 84 0.5 2.0 1.2 3.2 114 chr4 250860 intron dpr7 - chr4 250917 intron dpr7 - chr4 250974 intron dpr7 - chr4_7_250001 chr4_250001 RC1_1-HE 2721 chr4 619518 619544 chr4 619604 619630 8 84 4.0 3.0 3.5 1.8 112 chr4 619518 intron Eph + chr4 619574 intron Eph + chr4 619630 intron Eph + chr4_8_615001 chr4_615001 RC1_1-HE 2722 chr4 671604 671636 chr4 680188 680219 Tirant 14 8583 5.0 7.0 6.0 2.0 8615 chr4 671604 intron CG11360 + chr4 675912 intron CG11360 + chr4 680219 intron CG11360 + chr4_14_675001 chr4_675001 RC1_1-HE 2723 chr4 896783 896817 chr4 896861 896896 6 78 3.0 1.5 2.2 1.9 113 chr4 896783 intron unc-13 - chr4 896840 intron unc-13 - chr4 896896 intron unc-13 - chr4_6_895001 chr4_895001 RC1_1-HE 2724 chr4 905562 905597 chr4 905645 905680 17 83 3.0 3.5 3.2 4.0 118 chr4 905562 5` UTR unc-13 - chr4 905621 5` UTR unc-13 - chr4 905680 5` UTR unc-13 - chr4_17_905001 chr4_905001 RC1_1-HE 2725 chr4 1136811 1136840 chr4 1136940 1136969 14 129 2.0 2.5 2.2 4.4 158 chr4 1136811 3` UTR CG11155 + chr4 1136890 3` UTR CG11155 + chr4 1136969 3` UTR CG11155 + chr4_14_1135001 chr4_1135001 RC1_1-HE 2726 chrX 295855 295876 chrX 303476 303497 412 8 7621 5.0 3.5 4.2 1.5 7642 chrX 295855 intron CG3777 + chrX 299676 intron CG3777 + chrX 303497 intron CG3777 + chrX_8_295001 chrX_295001 RC1_1-HE 2727 chrX 318468 318501 chrX 323555 323588 flea 14 5086 4.5 6.0 5.2 2.3 5120 chrX 318468 intron,intron CG3777 +,CG32816 - chrX 321028 intron,intron CG3777 +,CG32816 - chrX 323588 intron,intron CG3777 +,CG32816 - chrX_14_320001 chrX_320001 RC1_1-HE 2728 chrX 325630 325651 chrX 325716 325737 8 86 2.0 3.5 2.8 2.1 107 chrX 325630 intron,intron CG3777 +,CG32816 - chrX 325684 intron,intron CG3777 +,CG32816 - chrX 325737 intron,intron CG3777 +,CG32816 - chrX_8_325001 chrX_325001 RC1_1-HE 2729 chrX 339261 339282 chrX 339352 339373 5 91 3.0 2.5 2.8 1.3 112 chrX 339261 intron,intron CG3777 +,CG32816 - chrX 339317 intron,intron CG3777 +,CG32816 - chrX 339373 intron,intron CG3777 +,CG32816 - chrX_5_335001 chrX_335001 RC1_1-HE 2730 chrX 348426 348437 chrX 348509 348520 9 83 3.5 7.5 5.5 1.4 94 chrX 348426 intron,intron CG3777 +,CG32816 - chrX 348473 intron,intron CG3777 +,CG32816 - chrX 348520 intron,intron CG3777 +,CG32816 - chrX_9_345001 chrX_345001 RC1_1-HE 2731 chrX 368712 368741 chrX 368820 368851 17 110 36.0 39.5 37.8 0.4 139 chrX 368712 intron CG32816 - chrX 368782 intron CG32816 - chrX 368851 intron CG32816 - chrX_17_365001 chrX_365001 RC1_1-HE 2732 chrX 428418 428452 chrX 434604 434638 3S18 7 6186 3.0 2.0 2.5 2.0 6220 chrX 428418 intron CG32816 - chrX 431528 intron CG32816 - chrX 434638 intron CG32816 - chrX_7_430001 chrX_430001 RC1_1-HE 2733 chrX 449894 449923 chrX 449992 450021 17 97 1.5 4.0 2.8 4.5 127 chrX 449894 intron CG32816 - chrX 449958 intron CG32816 - chrX 450021 intron CG32816 - chrX_17_445001 chrX_445001 RC1_1-HE 2734 chrX 450363 450395 chrX 450442 450474 11 79 3.0 3.5 3.2 2.6 111 chrX 450363 intron CG32816 - chrX 450418 intron CG32816 - chrX 450474 intron CG32816 - chrX_11_450001 chrX_450001 RC1_1-HE 2735 chrX 494611 494631 chrX 494704 494724 9 92 5.0 6.0 5.5 1.4 113 chrX 494611 intergenic CG17778 + chrX 494668 5` UTR CG17778 + chrX 494724 intron CG17778 + chrX_9_490001 chrX_490001 RC1_1-HE 2736 chrX 551421 551453 chrX 558982 559014 412 31 7560 8.5 5.5 7.0 3.9 7593 chrX 551421 intron Appl + chrX 555218 intron Appl + chrX 559014 intron Appl + chrX_31_555001 chrX_555001 RC1_1-HE 2737 chrX 580277 580287 chrX 580361 580371 6 84 7.0 13.0 10.0 0.5 94 chrX 580277 intergenic not near genes chrX 580324 intergenic not near genes chrX 580371 intergenic not near genes chrX_6_580001 chrX_580001 RC1_1-HE 2738 chrX 667644 667684 chrX 667729 667769 21 85 2.5 3.5 3.0 5.2 125 chrX 667644 intergenic not near genes chrX 667706 intergenic not near genes chrX 667769 intergenic not near genes chrX_21_665001 chrX_665001 RC1_1-HE 2739 chrX 670261 670292 chrX 670342 670373 4 81 0.0 1.5 0.8 2.2 112 chrX 670261 intergenic not near genes chrX 670317 intergenic not near genes chrX 670373 intergenic not near genes chrX_4_670001 chrX_670001 RC1_1-HE 2740 chrX 680534 680553 chrX 680851 680870 6 317 7.5 0.0 3.8 1.2 336 chrX 680534 intergenic not near genes chrX 680702 intergenic not near genes chrX 680870 intergenic not near genes chrX_6_680001 chrX_680001 RC1_1-HE 2741 chrX 680857 680865 chrX 680941 680949 8 83 0.0 6.0 3.0 2.0 92 chrX 680857 intergenic not near genes chrX 680903 intergenic not near genes chrX 680949 intergenic not near genes chrX_8_680001 chrX_680001 RC1_1-HE 2742 chrX 778124 778159 chrX 778215 778248 26 90 4.0 1.0 2.5 7.4 124 chrX 778124 intron fz3 + chrX 778186 intron fz3 + chrX 778248 intron fz3 + chrX_26_775001 chrX_775001 RC1_1-HE 2743 chrX 780590 780602 chrX 780667 780679 6 77 7.5 0.0 3.8 1.2 89 chrX 780590 intron fz3 + chrX 780634 intron fz3 + chrX 780679 intron fz3 + chrX_6_780001 chrX_780001 RC1_1-HE 2744 chrX 806784 806818 chrX 806881 806911 10 96 4.0 1.0 2.5 2.9 127 chrX 806784 intron Sec22 + chrX 806848 intron Sec22 + chrX 806911 intron Sec22 + chrX_10_805001 chrX_805001 RC1_1-HE 2745 chrX 827599 827635 chrX 835392 835428 roo 21 7793 5.5 3.5 4.5 3.8 7829 chrX 827599 intron CG43867 - chrX 831514 intron CG43867 - chrX 835428 intron CG43867 - chrX_21_830001 chrX_830001 RC1_1-HE 2746 chrX 868493 868515 chrX 868571 868593 12 76 6.0 9.5 7.8 1.4 100 chrX 868493 intron CG43867 - chrX 868543 intron CG43867 - chrX 868593 intron CG43867 - chrX_12_865001 chrX_865001 RC1_1-HE 2747 chrX 871111 871136 chrX 871201 871226 7 90 5.0 3.0 4.0 1.4 115 chrX 871111 intron CG43867 - chrX 871168 intron CG43867 - chrX 871226 intron CG43867 - chrX_7_870001 chrX_870001 RC1_1-HE 2748 chrX 906704 906733 chrX 908494 908523 S-element 10 1790 2.0 5.5 3.8 2.1 1819 chrX 906704 intron CG43867 - chrX 907614 intron CG43867 - chrX 908523 intron CG43867 - chrX_10_905001 chrX_905001 RC1_1-HE 2749 chrX 1085635 1085658 chrX 1085721 1085744 11 86 3.0 9.0 6.0 1.6 109 chrX 1085635 5` UTR,intron CR44779 +,CG3655 - chrX 1085690 5` UTR,intron CR44779 +,CG3655 - chrX 1085744 5` UTR,intron CR44779 +,CG3655 - chrX_11_1085001 chrX_1085001 RC1_1-HE 2750 chrX 1163296 1163330 chrX 1163375 1163409 13 79 4.0 4.5 4.2 2.5 113 chrX 1163296 intergenic CG34320 - chrX 1163352 intergenic CG34320 - chrX 1163409 intergenic CG34320 - chrX_13_1160001 chrX_1160001 RC1_1-HE 2751 chrX 1212184 1212194 chrX 1212278 1212288 6 94 6.0 4.5 5.2 1.0 104 chrX 1212184 3` UTR CG11398 - chrX 1212236 3` UTR CG11398 - chrX 1212288 3` UTR CG11398 - chrX_6_1210001 chrX_1210001 RC1_1-HE 2752 chrX 1357772 1357806 chrX 1367943 1367977 Doc 12 10171 5.5 2.0 3.8 2.5 10205 chrX 1357772 intergenic png - chrX 1362874 intergenic not near genes chrX 1367977 intergenic not near genes chrX_12_1360001 chrX_1360001 RC1_1-HE 2753 chrX 1387022 1387032 chrX 1387106 1387116 4 84 8.0 8.0 8.0 0.4 94 chrX 1387022 intron CG32813 + chrX 1387069 intron CG32813 + chrX 1387116 intron CG32813 + chrX_4_1385001 chrX_1385001 RC1_1-HE 2754 chrX 1627971 1628000 chrX 1635440 1635463 gtwin 14 7469 7.5 8.5 8.0 1.6 7492 chrX 1627971 intron,intron Mur2B -,br + chrX 1631717 intron,intron Mur2B -,br + chrX 1635463 intron,intron Mur2B -,br + chrX_14_1630001 chrX_1630001 RC1_1-HE 2755 chrX 1752556 1752570 chrX 1752634 1752648 12 78 4.5 7.5 6.0 1.7 92 chrX 1752556 intron Scgdelta - chrX 1752602 intron Scgdelta - chrX 1752648 intron Scgdelta - chrX_12_1750001 chrX_1750001 RC1_1-HE 2756 chrX 1822802 1822839 chrX 1822892 1822929 21 89 3.5 4.5 4.0 4.2 127 chrX 1822802 intron CG42666 + chrX 1822866 intron CG42666 + chrX 1822929 intron CG42666 + chrX_21_1820001 chrX_1820001 RC1_1-HE 2757 chrX 1825504 1825539 chrX 1825595 1825630 29 91 4.0 7.0 5.5 4.5 126 chrX 1825504 intron CG42666 + chrX 1825567 intron CG42666 + chrX 1825630 intron CG42666 + chrX_29_1825001 chrX_1825001 RC1_1-HE 2758 chrX 1840720 1840759 chrX 1840811 1840850 24 91 4.0 3.5 3.8 5.0 130 chrX 1840720 intron CG42666 + chrX 1840785 intron CG42666 + chrX 1840850 intron CG42666 + chrX_24_1840001 chrX_1840001 RC1_1-HE 2759 chrX 1930539 1930566 chrX 1938111 1938138 opus 6 7572 1.5 2.5 2.0 2.0 7599 chrX 1930539 intergenic CG11596 + chrX 1934338 intergenic not near genes chrX 1938138 3` UTR CG3857 - chrX_6_1930001 chrX_1930001 RC1_1-HE 2760 chrX 1954887 1954918 chrX 1962828 1962852 Stalker2 9 7940 3.0 3.5 3.2 2.1 7965 chrX 1954887 intron Hr4 + chrX 1958870 intron Hr4 + chrX 1962852 intron Hr4 + chrX_9_1955001 chrX_1955001 RC1_1-HE 2761 chrX 1996428 1996437 chrX 1996601 1996610 4 173 0.0 4.0 2.0 1.3 182 chrX 1996428 intron Hr4 + chrX 1996519 intron Hr4 + chrX 1996610 intron Hr4 + chrX_4_1995001 chrX_1995001 RC1_1-HE 2762 chrX 2095934 2095954 chrX 2096011 2096013 7 74 4.0 0.0 2.0 2.3 79 chrX 2095934 intron csw + chrX 2095974 intron csw + chrX 2096013 intron csw + chrX_7_2095001 chrX_2095001 RC1_1-HE 2763 chrX 2320731 2320758 chrX 2320826 2320853 9 95 2.5 3.0 2.8 2.4 122 chrX 2320731 intron phl + chrX 2320792 intron phl + chrX 2320853 intron phl + chrX_9_2320001 chrX_2320001 RC1_1-HE 2764 chrX 2321999 2322021 chrX 2322101 2322123 13 102 3.0 5.5 4.2 2.5 124 chrX 2321999 intron,3` UTR phl +,CR34052 - chrX 2322061 intron,intron phl +,CR34052 - chrX 2322123 intron,intron phl +,CR34052 - chrX_13_2320001 chrX_2320001 RC1_1-HE 2765 chrX 2385734 2385762 chrX 2385813 2385841 8 79 2.0 1.0 1.5 3.2 107 chrX 2385734 intron PsGEF - chrX 2385788 intron PsGEF - chrX 2385841 intron PsGEF - chrX_8_2385001 chrX_2385001 RC1_1-HE 2766 chrX 2399844 2399858 chrX 2408193 2408212 roo 9 8353 6.5 0.5 3.5 2.0 8368 chrX 2399844 intergenic not near genes chrX 2404028 intergenic not near genes chrX 2408212 intergenic not near genes chrX_9_2400001 chrX_2400001 RC1_1-HE 2767 chrX 2429654 2429667 chrX 2429736 2429749 9 82 0.0 5.0 2.5 2.6 95 chrX 2429654 intergenic not near genes chrX 2429702 intergenic not near genes chrX 2429749 intergenic not near genes chrX_9_2425001 chrX_2425001 RC1_1-HE 2768 chrX 2538266 2538287 chrX 2538355 2538376 14 89 9.5 4.5 7.0 1.8 110 chrX 2538266 intron trol - chrX 2538321 intron trol - chrX 2538376 intron trol - chrX_14_2535001 chrX_2535001 RC1_1-HE 2769 chrX 2578808 2578846 chrX 2578901 2578939 10 93 2.0 0.5 1.2 4.5 131 chrX 2578808 intergenic Pdfr +,Vha36-3 - chrX 2578874 intergenic Vha36-3 -,Pdfr + chrX 2578939 intergenic Vha36-3 -,Pdfr + chrX_10_2575001 chrX_2575001 RC1_1-HE 2770 chrX 2635377 2635396 chrX 2635487 2635506 4 110 3.5 7.0 5.2 0.6 129 chrX 2635377 intron sgg + chrX 2635442 intron sgg + chrX 2635506 intron sgg + chrX_4_2635001 chrX_2635001 RC1_1-HE 2771 chrX 2664391 2664400 chrX 2665538 2665547 1360 9 1147 0.5 6.5 3.5 2.0 1156 chrX 2664391 intron sgg + chrX 2664969 intron sgg + chrX 2665547 intron sgg + chrX_9_2660001 chrX_2660001 RC1_1-HE 2772 chrX 2664401 2664409 chrX 2665536 2665556 1360 5 1143 0.0 6.0 3.0 1.2 1155 chrX 2664401 intron sgg + chrX 2664978 intron sgg + chrX 2665556 intron sgg + chrX_5_2660001 chrX_2660001 RC1_1-HE 2773 chrX 2774460 2774483 chrX 2774542 2774566 5 80 0.5 4.0 2.2 1.6 106 chrX 2774460 intron kirre + chrX 2774513 intron kirre + chrX 2774566 intron kirre + chrX_5_2770001 chrX_2770001 RC1_1-HE 2774 chrX 2844908 2844928 chrX 2852319 2852339 mdg1 7 7411 5.5 2.5 4.0 1.4 7431 chrX 2844908 intron kirre + chrX 2848624 intron kirre + chrX 2852339 intron kirre + chrX_7_2845001 chrX_2845001 RC1_1-HE 2775 chrX 2884566 2884589 chrX 2884643 2884666 5 77 2.5 0.0 1.2 2.3 100 chrX 2884566 intron kirre + chrX 2884616 intron kirre + chrX 2884666 intron kirre + chrX_5_2880001 chrX_2880001 RC1_1-HE 2776 chrX 2917092 2917123 chrX 2917173 2917204 12 81 2.5 5.0 3.8 2.5 112 chrX 2917092 intron kirre + chrX 2917148 intron kirre + chrX 2917204 intron kirre + chrX_12_2915001 chrX_2915001 RC1_1-HE 2777 chrX 2948979 2949007 chrX 2949060 2949088 15 80 2.5 1.0 1.8 5.4 109 chrX 2948979 intron,3` UTR kirre +,CG3603 + chrX 2949034 intron,3` UTR kirre +,CG3603 + chrX 2949088 intron,3` UTR kirre +,CG3603 + chrX_15_2945001 chrX_2945001 RC1_1-HE 2778 chrX 3058018 3058047 chrX 3058260 3058289 pogo 7 242 2.0 0.5 1.2 3.2 271 chrX 3058018 intron kirre + chrX 3058154 intron kirre + chrX 3058289 intron kirre + chrX_7_3055001 chrX_3055001 RC1_1-HE 2779 chrX 3075635 3075643 chrX 3080943 3080951 Transpac 7 5308 8.5 1.5 5.0 1.2 5316 chrX 3075635 intron kirre + chrX 3078293 intron kirre + chrX 3080951 intron kirre + chrX_7_3075001 chrX_3075001 RC1_1-HE 2780 chrX 3094773 3094806 chrX 3094859 3094892 14 86 3.0 3.0 3.0 3.5 119 chrX 3094773 intron kirre + chrX 3094832 intron kirre + chrX 3094892 intron kirre + chrX_14_3090001 chrX_3090001 RC1_1-HE 2781 chrX 3109447 3109474 chrX 3109525 3109552 7 78 2.0 1.0 1.5 2.8 105 chrX 3109447 intron kirre + chrX 3109500 intron kirre + chrX 3109552 intron kirre + chrX_7_3105001 chrX_3105001 RC1_1-HE 2782 chrX 3120086 3120091 chrX 3120165 3120170 4 79 0.0 2.5 1.2 1.8 84 chrX 3120086 intron kirre + chrX 3120128 intron kirre + chrX 3120170 intron kirre + chrX_4_3120001 chrX_3120001 RC1_1-HE 2783 chrX 3193326 3193346 chrX 3193408 3193428 4 82 1.5 0.5 1.0 2.0 102 chrX 3193326 intron dnc + chrX 3193377 intron dnc + chrX 3193428 intron dnc + chrX_4_3190001 chrX_3190001 RC1_1-HE 2784 chrX 3206489 3206504 chrX 3206569 3206584 4 77 0.0 5.5 2.8 1.1 95 chrX 3206489 intron dnc + chrX 3206536 intron dnc + chrX 3206584 intron dnc + chrX_4_3205001 chrX_3205001 RC1_1-HE 2785 chrX 3275530 3275552 chrX 3275618 3275640 8 88 6.0 3.0 4.5 1.5 110 chrX 3275530 intron dnc + chrX 3275585 intron dnc + chrX 3275640 intron dnc + chrX_8_3275001 chrX_3275001 RC1_1-HE 2786 chrX 3295704 3295720 chrX 3295800 3295816 4 96 1.5 4.0 2.8 1.1 112 chrX 3295704 intron dnc + chrX 3295760 intron dnc + chrX 3295816 intron dnc + chrX_4_3295001 chrX_3295001 RC1_1-HE 2787 chrX 3306345 3306363 chrX 3306428 3306446 10 82 3.0 0.0 1.5 4.0 101 chrX 3306345 intron dnc + chrX 3306396 intron dnc + chrX 3306446 intron dnc + chrX_10_3305001 chrX_3305001 RC1_1-HE 2788 chrX 3395141 3395151 chrX 3395221 3395231 4 80 2.0 0.0 1.0 2.0 90 chrX 3395141 intron,intron CR44999 +,CG12535 - chrX 3395186 intron,intron CR44999 +,CG12535 - chrX 3395231 intron,intron CR44999 +,CG12535 - chrX_4_3395001 chrX_3395001 RC1_1-HE 2789 chrX 3406783 3406817 chrX 3406868 3406902 6 85 3.0 4.0 3.5 1.3 119 chrX 3406783 intron,intron CR44999 +,CG12535 - chrX 3406842 intron,intron CR44999 +,CG12535 - chrX 3406902 intron,intron CR44999 +,CG12535 - chrX_6_3405001 chrX_3405001 RC1_1-HE 2790 chrX 3408982 3409017 chrX 3409060 3409074 20 75 3.0 1.0 2.0 6.7 92 chrX 3408982 intron,intron CR44999 +,CG12535 - chrX 3409028 intron,intron CR44999 +,CG12535 - chrX 3409074 intron,intron CR44999 +,CG12535 - chrX_20_3405001 chrX_3405001 RC1_1-HE 2791 chrX 3415041 3415051 chrX 3421227 3421237 3S18 4 6186 2.0 4.0 3.0 1.0 6196 chrX 3415041 intron,intron CR44999 +,CG12535 - chrX 3418139 intron,intron CR44999 +,CG12535 - chrX 3421237 intron,intron CR44999 +,CG12535 - chrX_4_3415001 chrX_3415001 RC1_1-HE 2792 chrX 3476344 3476366 chrX 3476427 3476449 6 83 0.0 0.0 0.0 6.0 105 chrX 3476344 intron CR44999 + chrX 3476396 intron CR44999 + chrX 3476449 intron CR44999 + chrX_6_3475001 chrX_3475001 RC1_1-HE 2793 chrX 3493088 3493121 chrX 3502248 3502281 roo 8 9160 3.0 1.5 2.2 2.5 9193 chrX 3493088 intron,intron CR44999 +,Gas8 - chrX 3497684 intron,intron CR44999 +,Gas8 - chrX 3502281 intron,intron CR44999 +,Gas8 - chrX_8_3495001 chrX_3495001 RC1_1-HE 2794 chrX 3539046 3539053 chrX 3539128 3539135 5 82 9.0 7.5 8.2 0.5 89 chrX 3539046 intron CG32791 - chrX 3539090 intron CG32791 - chrX 3539135 intron CG32791 - chrX_5_3535001 chrX_3535001 RC1_1-HE 2795 chrX 3539054 3539073 chrX 3539127 3539155 10 81 5.5 7.5 6.5 1.3 101 chrX 3539054 intron CG32791 - chrX 3539104 intron CG32791 - chrX 3539155 intron CG32791 - chrX_10_3535001 chrX_3535001 RC1_1-HE 2796 chrX 3557992 3558019 chrX 3558070 3558097 15 78 6.0 8.0 7.0 1.9 105 chrX 3557992 intron,intron CG32791 -,ppk8 + chrX 3558044 intron,intron CG32791 -,ppk8 + chrX 3558097 intron,intron CG32791 -,ppk8 + chrX_15_3555001 chrX_3555001 RC1_1-HE 2797 chrX 3575844 3575861 chrX 3575948 3575965 4 104 7.5 6.0 6.8 0.5 121 chrX 3575844 intron AstA-R1 + chrX 3575904 intron AstA-R1 + chrX 3575965 intron AstA-R1 + chrX_4_3575001 chrX_3575001 RC1_1-HE 2798 chrX 3577598 3577621 chrX 12649914 12649915 7 9072309 10.5 6.5 8.5 0.7 9072317 chrX 3577598 intron AstA-R1 + chrX 8113756 intron Gclc - chrX 12649915 intron Tomosyn + chrX_7_8110001 chrX_8110001 RC1_1-HE 2799 chrX 3590034 3590064 chrX 3590137 3590167 11 103 4.0 4.5 4.2 2.1 133 chrX 3590034 intron AstA-R1 + chrX 3590100 intron AstA-R1 + chrX 3590167 intron AstA-R1 + chrX_11_3590001 chrX_3590001 RC1_1-HE 2800 chrX 3597109 3597131 chrX 3597198 3597220 9 89 3.0 2.5 2.8 2.4 111 chrX 3597109 intron AstA-R1 + chrX 3597164 intron AstA-R1 + chrX 3597220 intron AstA-R1 + chrX_9_3595001 chrX_3595001 RC1_1-HE 2801 chrX 3597548 3597584 chrX 3619717 3619735 roo 18 22168 5.5 6.0 5.8 2.6 22187 chrX 3597548 intron AstA-R1 + chrX 3608642 intron AstA-R1 + chrX 3619735 intron AstA-R1 + chrX_18_3605001 chrX_3605001 RC1_1-HE 2802 chrX 3673349 3673374 chrX 3673428 3673453 7 79 1.0 2.5 1.8 2.5 104 chrX 3673349 intron Mnt + chrX 3673401 intron Mnt + chrX 3673453 intron Mnt + chrX_7_3670001 chrX_3670001 RC1_1-HE 2803 chrX 3726759 3726771 chrX 3730157 3730169 NOF 7 3398 6.5 0.0 3.2 1.7 3410 chrX 3726759 intron tlk + chrX 3728464 intron tlk + chrX 3730169 intron tlk + chrX_7_3725001 chrX_3725001 RC1_1-HE 2804 chrX 3726773 3726797 chrX 3730155 3730195 NOF 8 3394 3.5 0.0 1.8 2.9 3422 chrX 3726773 intron tlk + chrX 3728484 intron tlk + chrX 3730195 intron tlk + chrX_8_3725001 chrX_3725001 RC1_1-HE 2805 chrX 3737078 3737101 chrX 3737171 3737194 7 93 2.5 4.5 3.5 1.6 116 chrX 3737078 intron tlk + chrX 3737136 intron tlk + chrX 3737194 intron tlk + chrX_7_3735001 chrX_3735001 RC1_1-HE 2806 chrX 3813802 3813821 chrX 3813882 3813901 7 80 4.5 1.5 3.0 1.8 99 chrX 3813802 intron ec + chrX 3813852 intron ec + chrX 3813901 intron ec + chrX_7_3810001 chrX_3810001 RC1_1-HE 2807 chrX 3823411 3823430 chrX 3823589 3823608 7 178 4.0 0.0 2.0 2.3 197 chrX 3823411 intron ec + chrX 3823510 intron ec + chrX 3823608 intron ec + chrX_7_3820001 chrX_3820001 RC1_1-HE 2808 chrX 3841583 3841601 chrX 3841664 3841682 9 81 0.0 6.0 3.0 2.2 99 chrX 3841583 intron ec + chrX 3841632 intron ec + chrX 3841682 intron ec + chrX_9_3840001 chrX_3840001 RC1_1-HE 2809 chrX 3842324 3842351 chrX 3842566 3842593 pogo 11 242 4.5 2.5 3.5 2.4 269 chrX 3842324 intron ec + chrX 3842458 intron ec + chrX 3842593 intron ec + chrX_11_3840001 chrX_3840001 RC1_1-HE 2810 chrX 3866105 3866135 chrX 3866184 3866214 16 79 2.0 3.5 2.8 4.2 109 chrX 3866105 intron yin - chrX 3866160 intron yin - chrX 3866214 intron yin - chrX_16_3865001 chrX_3865001 RC1_1-HE 2811 chrX 3880460 3880486 chrX 3880546 3880573 6 87 4.0 5.5 4.8 1.0 113 chrX 3880460 intergenic VhaAC39-1 + chrX 3880516 intergenic VhaAC39-1 + chrX 3880573 intergenic VhaAC39-1 + chrX_6_3880001 chrX_3880001 RC1_1-HE 2812 chrX 3986875 3986895 chrX 3994509 3994519 412 6 7632 3.0 7.0 5.0 1.0 7644 chrX 3986875 intergenic not near genes chrX 3990697 intergenic not near genes chrX 3994519 intergenic not near genes chrX_6_3990001 chrX_3990001 RC1_1-HE 2813 chrX 4048501 4048528 chrX 4048578 4048605 17 77 6.5 6.5 6.5 2.3 104 chrX 4048501 3` UTR CR45482 - chrX 4048553 3` UTR CR45482 - chrX 4048605 3` UTR CR45482 - chrX_17_4045001 chrX_4045001 RC1_1-HE 2814 chrX 4101886 4101900 chrX 4101967 4101981 5 81 1.0 3.5 2.2 1.6 95 chrX 4101886 exon CG15375 + chrX 4101934 exon CG15375 + chrX 4101981 exon CG15375 + chrX_5_4100001 chrX_4100001 RC1_1-HE 2815 chrX 4157891 4157923 chrX 4164927 4164959 297 20 7036 11.0 7.5 9.2 2.0 7068 chrX 4157891 intron Fas2 - chrX 4161425 intron Fas2 - chrX 4164959 intron Fas2 - chrX_20_4160001 chrX_4160001 RC1_1-HE 2816 chrX 4203515 4203545 chrX 4203596 4203626 7 81 4.0 4.5 4.2 1.3 111 chrX 4203515 intron Fas2 - chrX 4203570 intron Fas2 - chrX 4203626 intron Fas2 - chrX_7_4200001 chrX_4200001 RC1_1-HE 2817 chrX 4293143 4293164 chrX 4293335 4293357 8 193 7.0 4.0 5.5 1.2 214 chrX 4293143 intergenic not near genes chrX 4293250 intergenic not near genes chrX 4293357 intergenic not near genes chrX_8_4290001 chrX_4290001 RC1_1-HE 2818 chrX 4294494 4294517 chrX 4294593 4294616 6 99 3.0 1.0 2.0 2.0 122 chrX 4294494 intergenic not near genes chrX 4294555 intergenic not near genes chrX 4294616 intergenic not near genes chrX_6_4290001 chrX_4290001 RC1_1-HE 2819 chrX 4324390 4324415 chrX 4324468 4324493 10 78 2.5 0.5 1.5 4.0 103 chrX 4324390 intron norpA + chrX 4324442 intron norpA + chrX 4324493 intron norpA + chrX_10_4320001 chrX_4320001 RC1_1-HE 2820 chrX 4336124 4336153 chrX 4336211 4336240 9 87 3.0 4.0 3.5 2.0 116 chrX 4336124 intron norpA + chrX 4336182 intron norpA + chrX 4336240 intron norpA + chrX_9_4335001 chrX_4335001 RC1_1-HE 2821 chrX 4343736 4343755 chrX 4343813 4343832 6 75 4.5 1.0 2.8 1.6 96 chrX 4343736 intron norpA + chrX 4343784 intron norpA + chrX 4343832 intron norpA + chrX_6_4340001 chrX_4340001 RC1_1-HE 2822 chrX 4347685 4347700 chrX 4347768 4347773 10 82 8.5 10.5 9.5 1.0 88 chrX 4347685 intron norpA + chrX 4347729 intron norpA + chrX 4347773 intron norpA + chrX_10_4345001 chrX_4345001 RC1_1-HE 2823 chrX 4361440 4361473 chrX 4361520 4361552 16 80 4.5 11.5 8.0 1.8 112 chrX 4361440 intron norpA + chrX 4361496 intron norpA + chrX 4361552 intron norpA + chrX_16_4360001 chrX_4360001 RC1_1-HE 2824 chrX 4396872 4396899 chrX 4396949 4396976 15 77 5.5 5.5 5.5 2.3 104 chrX 4396872 intron CR32773 - chrX 4396924 intron CR32773 - chrX 4396976 intron CR32773 - chrX_15_4395001 chrX_4395001 RC1_1-HE 2825 chrX 4409196 4409229 chrX 4409275 4409308 7 79 4.0 0.0 2.0 2.3 112 chrX 4409196 intron CR32773 - chrX 4409252 intron CR32773 - chrX 4409308 intron CR32773 - chrX_7_4405001 chrX_4405001 RC1_1-HE 2826 chrX 4575613 4575647 chrX 4575703 4575737 9 90 2.0 2.5 2.2 2.8 124 chrX 4575613 intron CR32773 - chrX 4575675 intron CR32773 - chrX 4575737 intron CR32773 - chrX_9_4575001 chrX_4575001 RC1_1-HE 2827 chrX 4660822 4660849 chrX 4660922 4660949 8 100 6.0 0.0 3.0 2.0 127 chrX 4660822 intron CG3009 - chrX 4660886 intron CG3009 - chrX 4660949 intron CG3009 - chrX_8_4660001 chrX_4660001 RC1_1-HE 2828 chrX 4700392 4700403 chrX 4700736 4700747 jockey 4 344 6.0 2.5 4.2 0.8 355 chrX 4700392 3` UTR ctp + chrX 4700570 3` UTR ctp + chrX 4700747 3` UTR ctp + chrX_4_4700001 chrX_4700001 RC1_1-HE 2829 chrX 4731819 4731834 chrX 4736913 4736916 jockey 5 5091 5.5 6.0 5.8 0.7 5097 chrX 4731819 intergenic not near genes chrX 4734368 intergenic not near genes chrX 4736916 intergenic not near genes chrX_5_4730001 chrX_4730001 RC1_1-HE 2830 chrX 4744160 4744172 chrX 4744259 4744271 4 99 1.0 2.5 1.8 1.4 111 chrX 4744160 intergenic not near genes chrX 4744216 intergenic not near genes chrX 4744271 intergenic not near genes chrX_4_4740001 chrX_4740001 RC1_1-HE 2831 chrX 4755420 4755436 chrX 4755498 4755514 5 78 0.0 3.0 1.5 2.0 94 chrX 4755420 intergenic not near genes chrX 4755467 intergenic not near genes chrX 4755514 intergenic not near genes chrX_5_4755001 chrX_4755001 RC1_1-HE 2832 chrX 4763249 4763283 chrX 4763738 4763772 Stalker4 8 489 4.0 2.0 3.0 2.0 523 chrX 4763249 intergenic not near genes chrX 4763510 intergenic not near genes chrX 4763772 intergenic not near genes chrX_8_4760001 chrX_4760001 RC1_1-HE 2833 chrX 4792381 4792411 chrX 4792816 4792845 jockey 16 434 2.0 11.0 6.5 2.1 464 chrX 4792381 intergenic not near genes chrX 4792613 intergenic not near genes chrX 4792845 intergenic not near genes chrX_16_4790001 chrX_4790001 RC1_1-HE 2834 chrX 4827968 4828002 chrX 4835340 4835374 Stalker4 16 7369 4.0 5.0 4.5 2.9 7406 chrX 4827968 intergenic not near genes chrX 4831671 intergenic not near genes chrX 4835374 intergenic not near genes chrX_16_4830001 chrX_4830001 RC1_1-HE 2835 chrX 4856144 4856147 chrX 4856223 4856226 5 79 8.0 8.0 8.0 0.6 82 chrX 4856144 intron CG42594 + chrX 4856185 intron CG42594 + chrX 4856226 intron CG42594 + chrX_5_4855001 chrX_4855001 RC1_1-HE 2836 chrX 4861299 4861320 chrX 4861444 4861465 6 145 2.5 7.5 5.0 1.0 166 chrX 4861299 intron CG42594 + chrX 4861382 intron CG42594 + chrX 4861465 intron CG42594 + chrX_6_4860001 chrX_4860001 RC1_1-HE 2837 chrX 4990040 4990075 chrX 4997255 4997290 roo 10 7215 0.5 2.0 1.2 4.5 7250 chrX 4990040 intron CR44833 - chrX 4993665 intron CR44833 - chrX 4997290 intron CR44833 - chrX_10_4990001 chrX_4990001 RC1_1-HE 2838 chrX 5012099 5012118 chrX 5012180 5012199 13 81 0.0 0.0 0.0 13.0 100 chrX 5012099 intron CR44833 - chrX 5012149 intron CR44833 - chrX 5012199 intron CR44833 - chrX_13_5010001 chrX_5010001 RC1_1-HE 2839 chrX 5096293 5096302 chrX 5103859 5103868 springer 6 7566 0.0 3.5 1.8 2.1 7575 chrX 5096293 intron,intron CG15465 +,rg + chrX 5100080 intron,intron CG15465 +,rg + chrX 5103868 intron,intron CG15465 +,rg + chrX_6_5100001 chrX_5100001 RC1_1-HE 2840 chrX 5194693 5194700 chrX 5194779 5194786 4 86 14.0 2.0 8.0 0.4 93 chrX 5194693 intron,intron CG15465 +,rg + chrX 5194740 intron,intron CG15465 +,rg + chrX 5194786 intron,intron CG15465 +,rg + chrX_4_5190001 chrX_5190001 RC1_1-HE 2841 chrX 5261900 5261918 chrX 5261979 5261998 6 80 2.5 1.0 1.8 2.1 98 chrX 5261900 intergenic not near genes chrX 5261949 intergenic not near genes chrX 5261998 intergenic not near genes chrX_6_5260001 chrX_5260001 RC1_1-HE 2842 chrX 5338707 5338740 chrX 5339961 5339969 jockey 7 1250 2.0 5.0 3.5 1.6 1262 chrX 5338707 intergenic not near genes chrX 5339338 intergenic not near genes chrX 5339969 intergenic SK + chrX_7_5335001 chrX_5335001 RC1_1-HE 2843 chrX 5365082 5365103 chrX 5365162 5365183 10 80 4.0 6.0 5.0 1.7 101 chrX 5365082 intron SK + chrX 5365132 intron SK + chrX 5365183 intron SK + chrX_10_5365001 chrX_5365001 RC1_1-HE 2844 chrX 5431794 5431799 chrX 5431872 5431875 4 78 14.0 6.5 10.2 0.4 81 chrX 5431794 exon CG15784 + chrX 5431834 exon CG15784 + chrX 5431875 exon CG15784 + chrX_4_5430001 chrX_5430001 RC1_1-HE 2845 chrX 5473584 5473615 chrX 5473661 5473692 11 76 3.0 5.0 4.0 2.2 108 chrX 5473584 intron SPR + chrX 5473638 intron SPR + chrX 5473692 intron SPR + chrX_11_5470001 chrX_5470001 RC1_1-HE 2846 chrX 5512058 5512085 chrX 5512142 5512171 4 85 0.5 0.0 0.2 3.3 113 chrX 5512058 intergenic not near genes chrX 5512114 intergenic not near genes chrX 5512171 intergenic not near genes chrX_4_5510001 chrX_5510001 RC1_1-HE 2847 chrX 5533073 5533087 chrX 5533175 5533189 5 102 3.0 3.0 3.0 1.2 116 chrX 5533073 intron Vsx2 - chrX 5533131 intron Vsx2 - chrX 5533189 intron Vsx2 - chrX_5_5530001 chrX_5530001 RC1_1-HE 2848 chrX 5566774 5566785 chrX 5566856 5566867 9 81 9.5 15.0 12.2 0.7 93 chrX 5566774 intergenic not near genes chrX 5566820 intergenic not near genes chrX 5566867 intergenic not near genes chrX_9_5565001 chrX_5565001 RC1_1-HE 2849 chrX 5591430 5591444 chrX 5591523 5591537 6 93 1.5 4.5 3.0 1.5 107 chrX 5591430 intergenic not near genes chrX 5591484 intergenic not near genes chrX 5591537 intergenic not near genes chrX_6_5590001 chrX_5590001 RC1_1-HE 2850 chrX 5615463 5615482 chrX 5615643 5615662 4 180 8.0 5.5 6.8 0.5 199 chrX 5615463 exon CG34434 - chrX 5615562 exon CG34434 - chrX 5615662 exon CG34434 - chrX_4_5615001 chrX_5615001 RC1_1-HE 2851 chrX 5635979 5635982 chrX 5636080 5636083 7 101 0.5 13.5 7.0 0.9 104 chrX 5635979 intron CG42492 - chrX 5636031 intron CG42492 - chrX 5636083 intron CG42492 - chrX_7_5635001 chrX_5635001 RC1_1-HE 2852 chrX 5635983 5635997 chrX 5636073 5636087 20 98 0.5 11.5 6.0 2.9 104 chrX 5635983 intron CG42492 - chrX 5636035 intron CG42492 - chrX 5636087 intron CG42492 - chrX_20_5635001 chrX_5635001 RC1_1-HE 2853 chrX 5648221 5648247 chrX 5648302 5648328 9 81 1.0 2.0 1.5 3.6 107 chrX 5648221 intron CG42492 - chrX 5648274 intron CG42492 - chrX 5648328 intron CG42492 - chrX_9_5645001 chrX_5645001 RC1_1-HE 2854 chrX 5883809 5883841 chrX 5884051 5884083 pogo 6 242 1.5 3.0 2.2 1.9 274 chrX 5883809 intron CR45668 - chrX 5883946 intron CR45668 - chrX 5884083 intron CR45668 - chrX_6_5880001 chrX_5880001 RC1_1-HE 2855 chrX 5884162 5884191 chrX 5884404 5884418 pogo 8 239 5.0 4.0 4.5 1.5 256 chrX 5884162 intron CR45668 - chrX 5884290 intron CR45668 - chrX 5884418 intron CR45668 - chrX_8_5880001 chrX_5880001 RC1_1-HE 2856 chrX 5886460 5886489 chrX 5886547 5886576 13 87 2.5 0.0 1.2 5.9 116 chrX 5886460 intron CR45668 - chrX 5886518 intron CR45668 - chrX 5886576 intron CR45668 - chrX_13_5885001 chrX_5885001 RC1_1-HE 2857 chrX 6159357 6159383 chrX 6159437 6159463 11 80 0.5 2.0 1.2 5.0 106 chrX 6159357 intron Ca-alpha1T - chrX 6159410 intron Ca-alpha1T - chrX 6159463 intron Ca-alpha1T - chrX_11_6155001 chrX_6155001 RC1_1-HE 2858 chrX 6171580 6171617 chrX 6179014 6179051 Quasimodo 12 7432 6.0 5.0 5.5 1.8 7471 chrX 6171580 intron Ca-alpha1T - chrX 6175316 intron Ca-alpha1T - chrX 6179051 intron Ca-alpha1T - chrX_12_6175001 chrX_6175001 RC1_1-HE 2859 chrX 6203975 6203999 chrX 6204053 6204081 5 81 1.0 0.5 0.8 2.8 106 chrX 6203975 intergenic not near genes chrX 6204028 intergenic not near genes chrX 6204081 intergenic not near genes chrX_5_6200001 chrX_6200001 RC1_1-HE 2860 chrX 6280792 6280812 chrX 6280894 6280914 13 102 11.0 1.0 6.0 1.9 122 chrX 6280792 intergenic not near genes chrX 6280853 intergenic not near genes chrX 6280914 intergenic not near genes chrX_13_6280001 chrX_6280001 RC1_1-HE 2861 chrX 6335215 6335240 chrX 6337726 6337751 Tirant 13 2511 0.5 4.5 2.5 3.7 2536 chrX 6335215 intergenic not near genes chrX 6336483 intergenic not near genes chrX 6337751 intergenic CG3842 + chrX_13_6335001 chrX_6335001 RC1_1-HE 2862 chrX 6392869 6392899 chrX 6397635 6397665 Doc 7 4766 2.0 0.5 1.2 3.2 4796 chrX 6392869 intergenic not near genes chrX 6395267 intergenic not near genes chrX 6397665 intergenic not near genes chrX_7_6395001 chrX_6395001 RC1_1-HE 2863 chrX 6505598 6505626 chrX 6505676 6505686 11 76 4.5 2.0 3.2 2.6 88 chrX 6505598 intron CG42340 - chrX 6505642 intron CG42340 - chrX 6505686 intron CG42340 - chrX_11_6505001 chrX_6505001 RC1_1-HE 2864 chrX 6507289 6507317 chrX 6507428 6507456 12 139 8.5 3.5 6.0 1.7 167 chrX 6507289 intron CG42340 - chrX 6507372 intron CG42340 - chrX 6507456 intron CG42340 - chrX_12_6505001 chrX_6505001 RC1_1-HE 2865 chrX 6533782 6533814 chrX 6533866 6533898 14 84 3.0 2.0 2.5 4.0 116 chrX 6533782 intergenic dx +,RpL7A - chrX 6533840 intergenic dx +,RpL7A - chrX 6533898 intergenic dx + chrX_14_6530001 chrX_6530001 RC1_1-HE 2866 chrX 6562823 6562845 chrX 6571299 6571328 Tirant 8 8482 4.0 6.0 5.0 1.3 8505 chrX 6562823 intron CG34417 + chrX 6567076 intron CG34417 + chrX 6571328 intron CG34417 + chrX_8_6565001 chrX_6565001 RC1_1-HE 2867 chrX 6584718 6584749 chrX 6584800 6584831 14 82 3.0 1.5 2.2 4.4 113 chrX 6584718 intron CG34417 + chrX 6584774 intron CG34417 + chrX 6584831 intron CG34417 + chrX_14_6580001 chrX_6580001 RC1_1-HE 2868 chrX 6605481 6605497 chrX 6608504 6608520 Burdock 5 3023 3.5 1.0 2.2 1.6 3039 chrX 6605481 intron pigs + chrX 6607000 intron pigs + chrX 6608520 intron pigs + chrX_5_6605001 chrX_6605001 RC1_1-HE 2869 chrX 6621649 6621675 chrX 6621763 6621789 14 114 7.5 8.5 8.0 1.6 140 chrX 6621649 intron pigs + chrX 6621719 intron pigs + chrX 6621789 intron pigs + chrX_14_6620001 chrX_6620001 RC1_1-HE 2870 chrX 6629784 6629794 chrX 6629872 6629882 6 88 4.0 6.0 5.0 1.0 98 chrX 6629784 intron pigs + chrX 6629833 intron pigs + chrX 6629882 intron pigs + chrX_6_6625001 chrX_6625001 RC1_1-HE 2871 chrX 6688992 6689013 chrX 6689164 6689185 6 172 6.5 8.0 7.2 0.7 193 chrX 6688992 intergenic CG3184 -,CG14442 - chrX 6689088 intergenic CG14442 -,CG3184 - chrX 6689185 intergenic CG14442 -,CG3184 - chrX_6_6685001 chrX_6685001 RC1_1-HE 2872 chrX 6703311 6703340 chrX 6703394 6703423 5 83 3.0 4.5 3.8 1.0 112 chrX 6703311 intron CG14441 + chrX 6703367 intron CG14441 + chrX 6703423 intron CG14441 + chrX_5_6700001 chrX_6700001 RC1_1-HE 2873 chrX 6733444 6733672 chrX 6733530 6733781 11 96 5.0 7.0 6.0 1.6 337 chrX 6733444 intron,intron CG3168 -,CR43461 + chrX 6733612 intron,intron CG3168 -,CR43461 + chrX 6733781 intron,intron CG3168 -,CR43461 + chrX_11_6730001 chrX_6730001 RC1_1-HE 2874 chrX 6857520 6857533 chrX 6857598 6857610 8 78 5.5 3.0 4.2 1.5 90 chrX 6857520 intron CG14434 - chrX 6857565 intron CG14434 - chrX 6857610 intron CG14434 - chrX_8_6855001 chrX_6855001 RC1_1-HE 2875 chrX 6897580 6897608 chrX 7441697 7441725 6 544117 7.5 7.0 7.2 0.7 544145 chrX 6897580 intergenic not near genes chrX 7169652 intron,intron CG9650 +,CR44357 - chrX 7441725 intergenic not near genes chrX_6_7165001 chrX_7165001 RC1_1-HE 2876 chrX 6897690 6897698 chrX 6897801 6897809 4 111 0.0 0.5 0.2 3.3 119 chrX 6897690 intergenic not near genes chrX 6897750 intergenic not near genes chrX 6897809 intergenic not near genes chrX_4_6895001 chrX_6895001 RC1_1-HE 2877 chrX 6989500 6989533 chrX 6989588 6989621 9 88 1.5 3.0 2.2 2.8 121 chrX 6989500 intron ogre - chrX 6989560 intron ogre - chrX 6989621 intron ogre - chrX_9_6985001 chrX_6985001 RC1_1-HE 2878 chrX 7023598 7023632 chrX 7030989 7031023 Tabor 15 7391 2.5 2.0 2.2 4.7 7425 chrX 7023598 intron CG12541 - chrX 7027310 intron CG12541 - chrX 7031023 intron CG12541 - chrX_15_7025001 chrX_7025001 RC1_1-HE 2879 chrX 7045590 7045611 chrX 7045785 7045808 4 194 0.0 5.0 2.5 1.1 218 chrX 7045590 intron CG12541 - chrX 7045699 intron CG12541 - chrX 7045808 intron CG12541 - chrX_4_7045001 chrX_7045001 RC1_1-HE 2880 chrX 7125243 7125278 chrX 7134403 7134438 roo 14 9160 5.5 7.0 6.2 1.9 9195 chrX 7125243 intergenic not near genes chrX 7129840 intergenic not near genes chrX 7134438 intergenic not near genes chrX_14_7125001 chrX_7125001 RC1_1-HE 2881 chrX 7156054 7156067 chrX 7156146 7156159 4 92 3.5 6.0 4.8 0.7 105 chrX 7156054 intron CG9650 + chrX 7156106 intron CG9650 + chrX 7156159 intron CG9650 + chrX_4_7155001 chrX_7155001 RC1_1-HE 2882 chrX 7367686 7367697 chrX 7367765 7367776 6 79 0.0 2.0 1.0 3.0 90 chrX 7367686 intron,intron CR44357 -,CG1677 - chrX 7367731 intron,intron CR44357 -,CG1677 - chrX 7367776 intron,intron CR44357 -,CG1677 - chrX_6_7365001 chrX_7365001 RC1_1-HE 2883 chrX 7570728 7570748 chrX 7570837 7570857 19 109 3.5 8.0 5.8 2.8 129 chrX 7570728 intergenic not near genes chrX 7570792 intergenic not near genes chrX 7570857 intergenic not near genes chrX_19_7570001 chrX_7570001 RC1_1-HE 2884 chrX 7702516 7702526 chrX 7702600 7702610 6 84 14.0 19.0 16.5 0.3 94 chrX 7702516 intron CHES-1-like - chrX 7702563 intron CHES-1-like - chrX 7702610 intron CHES-1-like - chrX_6_7700001 chrX_7700001 RC1_1-HE 2885 chrX 7702905 7702936 chrX 7703345 7703376 jockey 30 440 7.0 10.5 8.8 3.1 471 chrX 7702905 intron CHES-1-like - chrX 7703140 intron CHES-1-like - chrX 7703376 intron CHES-1-like - chrX_30_7700001 chrX_7700001 RC1_1-HE 2886 chrX 7737159 7737181 chrX 7737242 7737264 16 83 6.0 2.5 4.2 3.1 105 chrX 7737159 5` UTR Tom40 + chrX 7737212 intron Tom40 + chrX 7737264 intron Tom40 + chrX_16_7735001 chrX_7735001 RC1_1-HE 2887 chrX 7845724 7845756 chrX 7847216 7847248 hopper2 19 1492 4.0 0.5 2.2 5.9 1524 chrX 7845724 intergenic not near genes chrX 7846486 intergenic not near genes chrX 7847248 intergenic not near genes chrX_19_7845001 chrX_7845001 RC1_1-HE 2888 chrX 8014703 8014717 chrX 8014787 8014801 5 84 3.0 3.5 3.2 1.2 98 chrX 8014703 intron Tbh + chrX 8014752 intron Tbh + chrX 8014801 intron Tbh + chrX_5_8010001 chrX_8010001 RC1_1-HE 2889 chrX 8031429 8031459 chrX 8035739 8035769 Juan 8 4310 6.0 4.5 5.2 1.3 4340 chrX 8031429 intergenic not near genes chrX 8033599 intergenic not near genes chrX 8035769 3` UTR CG2233 - chrX_8_8030001 chrX_8030001 RC1_1-HE 2890 chrX 8211232 8211239 chrX 8211310 8211317 4 78 19.5 9.0 14.2 0.3 85 chrX 8211232 intron sdt + chrX 8211274 intron sdt + chrX 8211317 intron sdt + chrX_4_8210001 chrX_8210001 RC1_1-HE 2891 chrX 8220990 8221017 chrX 8221089 8221127 9 104 4.0 3.5 3.8 1.9 137 chrX 8220990 intron sdt + chrX 8221058 intron sdt + chrX 8221127 intron sdt + chrX_9_8220001 chrX_8220001 RC1_1-HE 2892 chrX 8305341 8305355 chrX 8305426 8305440 4 85 3.0 0.0 1.5 1.6 99 chrX 8305341 intron nAChRalpha3 - chrX 8305390 intron nAChRalpha3 - chrX 8305440 intron nAChRalpha3 - chrX_4_8305001 chrX_8305001 RC1_1-HE 2893 chrX 8364843 8364881 chrX 8365241 8365262 BS 22 397 4.5 4.0 4.2 4.2 419 chrX 8364843 intron nAChRalpha3 - chrX 8365052 intron nAChRalpha3 - chrX 8365262 intron nAChRalpha3 - chrX_22_8365001 chrX_8365001 RC1_1-HE 2894 chrX 8393010 8393028 chrX 8393313 8393331 4 303 3.5 6.0 4.8 0.7 321 chrX 8393010 intergenic not near genes chrX 8393170 intergenic not near genes chrX 8393331 intergenic not near genes chrX_4_8390001 chrX_8390001 RC1_1-HE 2895 chrX 8413469 8413495 chrX 8413548 8413574 10 79 5.5 3.0 4.2 1.9 105 chrX 8413469 intron Trf2 + chrX 8413522 intron Trf2 + chrX 8413574 intron Trf2 + chrX_10_8410001 chrX_8410001 RC1_1-HE 2896 chrX 8536760 8536779 chrX 8536837 8536856 18 77 7.0 8.5 7.8 2.0 96 chrX 8536760 intron Nrg + chrX 8536808 intron Nrg + chrX 8536856 intron Nrg + chrX_18_8535001 chrX_8535001 RC1_1-HE 2897 chrX 8543585 8543619 chrX 8543665 8543699 15 80 2.5 1.5 2.0 5.0 114 chrX 8543585 intron Nrg + chrX 8543642 intron Nrg + chrX 8543699 intron Nrg + chrX_15_8540001 chrX_8540001 RC1_1-HE 2898 chrX 8644658 8644690 chrX 8644738 8644770 6 80 0.5 1.5 1.0 3.0 112 chrX 8644658 intron oc - chrX 8644714 intron oc - chrX 8644770 intron oc - chrX_6_8640001 chrX_8640001 RC1_1-HE 2899 chrX 8654274 8654278 chrX 8654353 8654357 4 79 4.0 0.5 2.2 1.2 83 chrX 8654274 intergenic not near genes chrX 8654316 intergenic not near genes chrX 8654357 intergenic not near genes chrX_4_8650001 chrX_8650001 RC1_1-HE 2900 chrX 8690792 8690815 chrX 8691079 8691102 12 287 15.0 26.5 20.8 0.6 310 chrX 8690792 exon Ogg1 + chrX 8690947 exon Ogg1 + chrX 8691102 exon Ogg1 + chrX_12_8690001 chrX_8690001 RC1_1-HE 2901 chrX 8708692 8708705 chrX 8708874 8708887 10 182 28.0 19.5 23.8 0.4 195 chrX 8708692 intergenic not near genes chrX 8708790 intergenic not near genes chrX 8708887 intergenic not near genes chrX_10_8705001 chrX_8705001 RC1_1-HE 2902 chrX 8708994 8709012 chrX 8709098 8709116 8 103 8.0 7.5 7.8 0.9 122 chrX 8708994 intergenic not near genes chrX 8709055 intergenic not near genes chrX 8709116 intergenic not near genes chrX_8_8705001 chrX_8705001 RC1_1-HE 2903 chrX 8709369 8709400 chrX 8709446 8709477 5 77 13.5 12.0 12.8 0.4 108 chrX 8709369 intergenic Hexo2 + chrX 8709423 intergenic Hexo2 + chrX 8709477 intergenic Hexo2 + chrX_5_8705001 chrX_8705001 RC1_1-HE 2904 chrX 8727401 8727558 chrX 8727479 8727688 20 109 2.5 10.5 6.5 2.7 287 chrX 8727401 intergenic not near genes chrX 8727544 intergenic not near genes chrX 8727688 intergenic not near genes chrX_20_8725001 chrX_8725001 RC1_1-HE 2905 chrX 8826130 8826154 chrX 8826215 8826239 11 85 13.0 18.0 15.5 0.7 109 chrX 8826130 intergenic not near genes chrX 8826184 intergenic not near genes chrX 8826239 intergenic not near genes chrX_11_8825001 chrX_8825001 RC1_1-HE 2906 chrX 8860775 8860800 chrX 8860860 8860885 8 85 0.0 2.5 1.2 3.6 110 chrX 8860775 intron CG12075 + chrX 8860830 intron CG12075 + chrX 8860885 intron CG12075 + chrX_8_8860001 chrX_8860001 RC1_1-HE 2907 chrX 8888639 8888672 chrX 8888717 8888750 16 78 7.0 7.5 7.2 2.0 111 chrX 8888639 intron Moe - chrX 8888694 intron Moe - chrX 8888750 intron Moe - chrX_16_8885001 chrX_8885001 RC1_1-HE 2908 chrX 8922324 8922360 chrX 8922759 8922795 jockey 9 433 4.5 2.0 3.2 2.1 471 chrX 8922324 intron rdgA + chrX 8922560 intron rdgA + chrX 8922795 intron rdgA + chrX_9_8920001 chrX_8920001 RC1_1-HE 2909 chrX 8927587 8927614 chrX 8929850 8929885 NOF 6 2270 5.5 3.0 4.2 1.2 2298 chrX 8927587 intron rdgA + chrX 8928736 intron rdgA + chrX 8929885 intron rdgA + chrX_6_8925001 chrX_8925001 RC1_1-HE 2910 chrX 8948756 8948788 chrX 8956267 8956299 roo 7 7511 5.5 1.0 3.2 1.7 7543 chrX 8948756 intron rdgA + chrX 8952528 intron rdgA + chrX 8956299 intron rdgA + chrX_7_8950001 chrX_8950001 RC1_1-HE 2911 chrX 8958045 8958066 chrX 8958126 8958147 6 79 0.0 0.5 0.2 5.0 102 chrX 8958045 intron rdgA + chrX 8958096 intron rdgA + chrX 8958147 intron rdgA + chrX_6_8955001 chrX_8955001 RC1_1-HE 2912 chrX 8979996 8980003 chrX 8980078 8980085 6 82 8.5 0.0 4.2 1.2 89 chrX 8979996 intron,intron rdgA +,CR43836 - chrX 8980040 intron,intron rdgA +,CR43836 - chrX 8980085 intron,intron rdgA +,CR43836 - chrX_6_8980001 chrX_8980001 RC1_1-HE 2913 chrX 9020288 9020294 chrX 9020400 9020406 5 112 45.5 23.0 34.2 0.1 118 chrX 9020288 intron,intron rdgA +,CR43836 - chrX 9020347 intron,intron rdgA +,CR43836 - chrX 9020406 intron,intron rdgA +,CR43836 - chrX_5_9020001 chrX_9020001 RC1_1-HE 2914 chrX 9062719 9062742 chrX 9062798 9062821 7 79 5.0 2.5 3.8 1.5 102 chrX 9062719 intron CG15365 - chrX 9062770 intron CG15365 - chrX 9062821 intron CG15365 - chrX_7_9060001 chrX_9060001 RC1_1-HE 2915 chrX 9131205 9131242 chrX 9131301 9131338 27 95 10.0 7.5 8.8 2.8 133 chrX 9131205 intron fend - chrX 9131272 intron fend - chrX 9131338 intron fend - chrX_27_9130001 chrX_9130001 RC1_1-HE 2916 chrX 9185217 9185234 chrX 9185420 9185437 9 203 4.0 0.0 2.0 3.0 220 chrX 9185217 3` UTR mei-P26 + chrX 9185327 3` UTR mei-P26 + chrX 9185437 3` UTR mei-P26 + chrX_9_9185001 chrX_9185001 RC1_1-HE 2917 chrX 9229904 9229936 chrX 9229985 9230017 12 81 4.0 3.5 3.8 2.5 113 chrX 9229904 intron CG12121 - chrX 9229960 intron CG12121 - chrX 9230017 intron CG12121 - chrX_12_9225001 chrX_9225001 RC1_1-HE 2918 chrX 9273021 9273042 chrX 9273103 9273124 5 82 1.5 2.5 2.0 1.7 103 chrX 9273021 intergenic Cfp1 -,CG16892 + chrX 9273072 intergenic Cfp1 -,CG16892 + chrX 9273124 intergenic Cfp1 -,CG16892 + chrX_5_9270001 chrX_9270001 RC1_1-HE 2919 chrX 9298607 9298639 chrX 9298699 9298731 9 92 2.5 3.0 2.8 2.4 124 chrX 9298607 intron lz + chrX 9298669 intron lz + chrX 9298731 intron lz + chrX_9_9295001 chrX_9295001 RC1_1-HE 2920 chrX 9397510 9397546 chrX 9399052 9399088 13 1542 2.5 4.0 3.2 3.1 1578 chrX 9397510 intron mgl - chrX 9398299 intron mgl - chrX 9399088 intron mgl - chrX_13_9395001 chrX_9395001 RC1_1-HE 2921 chrX 9403861 9403892 chrX 9403940 9403959 6 74 2.0 2.5 2.2 1.9 98 chrX 9403861 intron mgl - chrX 9403910 intron mgl - chrX 9403959 intron mgl - chrX_6_9400001 chrX_9400001 RC1_1-HE 2922 chrX 9427264 9427295 chrX 9427350 9427381 6 84 2.5 1.5 2.0 2.0 117 chrX 9427264 intron mgl - chrX 9427322 intron mgl - chrX 9427381 intron mgl - chrX_6_9425001 chrX_9425001 RC1_1-HE 2923 chrX 9464488 9464499 chrX 9464555 9464576 4 74 1.5 4.0 2.8 1.1 88 chrX 9464488 intron mgl - chrX 9464532 intron mgl - chrX 9464576 intron mgl - chrX_4_9460001 chrX_9460001 RC1_1-HE 2924 chrX 9508148 9508167 chrX 9509667 9509686 jockey 8 1519 5.5 7.0 6.2 1.1 1538 chrX 9508148 intron CG32700 - chrX 9508917 intron CG32700 - chrX 9509686 intron CG32700 - chrX_8_9505001 chrX_9505001 RC1_1-HE 2925 chrX 9575798 9575815 chrX 9576123 9576140 mdg3 10 324 5.0 6.5 5.8 1.5 342 chrX 9575798 intron,exon CG32699 -,CG42395 - chrX 9575969 intron,intron CG32699 -,CG42395 - chrX 9576140 intron,5` UTR CG32699 -,CG42395 - chrX_10_9575001 chrX_9575001 RC1_1-HE 2926 chrX 9613183 9613207 chrX 9613270 9613290 15 87 3.5 4.0 3.8 3.1 107 chrX 9613183 intron CG42797 + chrX 9613236 intron CG42797 + chrX 9613290 intron CG42797 + chrX_15_9610001 chrX_9610001 RC1_1-HE 2927 chrX 9807393 9807421 chrX 9807482 9807510 8 89 4.0 3.5 3.8 1.7 117 chrX 9807393 intron CG32698 + chrX 9807452 intron CG32698 + chrX 9807510 intron CG32698 + chrX_8_9805001 chrX_9805001 RC1_1-HE 2928 chrX 9839365 9839380 chrX 9839448 9839463 8 83 0.0 3.5 1.8 2.9 98 chrX 9839365 intron CG32698 + chrX 9839414 intron CG32698 + chrX 9839463 intron CG32698 + chrX_8_9835001 chrX_9835001 RC1_1-HE 2929 chrX 9854457 9854489 chrX 9854539 9854571 13 82 3.0 1.5 2.2 4.1 114 chrX 9854457 intergenic not near genes chrX 9854514 intergenic not near genes chrX 9854571 intergenic not near genes chrX_13_9850001 chrX_9850001 RC1_1-HE 2930 chrX 9932880 9932900 chrX 9932957 9932977 14 77 7.5 6.5 7.0 1.8 97 chrX 9932880 intergenic not near genes chrX 9932928 intergenic not near genes chrX 9932977 intergenic not near genes chrX_14_9930001 chrX_9930001 RC1_1-HE 2931 chrX 9938759 9938767 chrX 9938839 9938844 6 80 14.5 12.5 13.5 0.4 85 chrX 9938759 intergenic not near genes chrX 9938802 intergenic not near genes chrX 9938844 intergenic not near genes chrX_6_9935001 chrX_9935001 RC1_1-HE 2932 chrX 9938774 9938782 chrX 9938838 9938843 7 72 11.5 12.0 11.8 0.5 69 chrX 9938774 intergenic not near genes chrX 9938808 intergenic not near genes chrX 9938843 intergenic not near genes chrX_7_9935001 chrX_9935001 RC1_1-HE 2933 chrX 9949162 9949184 chrX 9949307 9949329 7 143 4.0 0.5 2.2 2.2 167 chrX 9949162 intergenic not near genes chrX 9949246 intergenic not near genes chrX 9949329 intergenic not near genes chrX_7_9945001 chrX_9945001 RC1_1-HE 2934 chrX 10077202 10077211 chrX 10077305 10077314 5 103 6.5 3.5 5.0 0.8 112 chrX 10077202 intron ZAP3 - chrX 10077258 intron ZAP3 - chrX 10077314 intron ZAP3 - chrX_5_10075001 chrX_10075001 RC1_1-HE 2935 chrX 10124028 10124055 chrX 10124134 10124161 7 106 3.0 2.5 2.8 1.8 133 chrX 10124028 intron,intron RhoU +,CR44894 - chrX 10124094 intron,intron RhoU +,CR44894 - chrX 10124161 intron,intron RhoU +,CR44894 - chrX_7_10120001 chrX_10120001 RC1_1-HE 2936 chrX 10138215 10138247 chrX 10145720 10145752 412 7 7505 4.0 4.5 4.2 1.3 7537 chrX 10138215 intron,intron RhoU +,CR44894 - chrX 10141984 intron,intron RhoU +,CR44894 - chrX 10145752 intron,intron RhoU +,CR44894 - chrX_7_10140001 chrX_10140001 RC1_1-HE 2937 chrX 10152002 10152007 chrX 10152094 10152099 4 92 0.0 5.5 2.8 1.1 97 chrX 10152002 intron CR44894 - chrX 10152050 intron CR44894 - chrX 10152099 intron CR44894 - chrX_4_10150001 chrX_10150001 RC1_1-HE 2938 chrX 10154288 10154305 chrX 10154365 10154382 6 77 1.0 1.0 1.0 3.0 94 chrX 10154288 intron,intron CR44894 -,CG12645 + chrX 10154335 intron,intron CR44894 -,CG12645 + chrX 10154382 intron,intron CR44894 -,CG12645 + chrX_6_10150001 chrX_10150001 RC1_1-HE 2939 chrX 10265566 10265601 chrX 10265652 10265687 21 86 7.0 7.5 7.2 2.6 121 chrX 10265566 intergenic CG12643 - chrX 10265626 intergenic CG12643 - chrX 10265687 intergenic CG12643 - chrX_21_10265001 chrX_10265001 RC1_1-HE 2940 chrX 10267299 10267334 chrX 10276450 10276485 roo 7 9151 3.5 3.0 3.2 1.7 9186 chrX 10267299 3` UTR alpha-Man-I - chrX 10271892 intron alpha-Man-I - chrX 10276485 3` UTR alpha-Man-I - chrX_7_10270001 chrX_10270001 RC1_1-HE 2941 chrX 10333180 10333204 chrX 10333382 10333406 4 202 3.0 4.5 3.8 0.8 226 chrX 10333180 intergenic CG43740 + chrX 10333293 intergenic CG43740 + chrX 10333406 intergenic CG43740 + chrX_4_10330001 chrX_10330001 RC1_1-HE 2942 chrX 10339100 10339127 chrX 10339285 10339312 8 185 7.0 2.5 4.8 1.4 212 chrX 10339100 intron CG43740 + chrX 10339206 intron CG43740 + chrX 10339312 intron CG43740 + chrX_8_10335001 chrX_10335001 RC1_1-HE 2943 chrX 10502937 10502965 chrX 10503022 10503050 9 84 4.5 4.5 4.5 1.6 113 chrX 10502937 intron spri - chrX 10502994 intron spri - chrX 10503050 intron spri - chrX_9_10500001 chrX_10500001 RC1_1-HE 2944 chrX 10550866 10550886 chrX 10552334 10552354 hobo 5 1468 2.5 3.0 2.8 1.3 1488 chrX 10550866 intron spri - chrX 10551610 intron spri - chrX 10552354 intron spri - chrX_5_10550001 chrX_10550001 RC1_1-HE 2945 chrX 10579996 10580013 chrX 10580106 10580123 6 110 5.5 0.0 2.8 1.6 127 chrX 10579996 intron spri - chrX 10580060 intron spri - chrX 10580123 intron spri - chrX_6_10580001 chrX_10580001 RC1_1-HE 2946 chrX 10686047 10686068 chrX 10691185 10691206 roo 8 5138 6.0 3.0 4.5 1.5 5159 chrX 10686047 intron X11Lbeta + chrX 10688626 intron X11Lbeta + chrX 10691206 intron X11Lbeta + chrX_8_10685001 chrX_10685001 RC1_1-HE 2947 chrX 10694150 10694184 chrX 10694231 10694265 16 79 6.0 8.0 7.0 2.0 115 chrX 10694150 intron X11Lbeta + chrX 10694208 intron X11Lbeta + chrX 10694265 intron X11Lbeta + chrX_16_10690001 chrX_10690001 RC1_1-HE 2948 chrX 10747065 10747092 chrX 10747168 10747192 4 102 3.0 6.5 4.8 0.7 127 chrX 10747065 exon ras + chrX 10747128 intron ras + chrX 10747192 intron ras + chrX_4_10745001 chrX_10745001 RC1_1-HE 2949 chrX 10747093 10747097 chrX 10747167 10747197 4 94 0.5 6.0 3.2 1.0 104 chrX 10747093 intron ras + chrX 10747145 intron ras + chrX 10747197 intron ras + chrX_4_10745001 chrX_10745001 RC1_1-HE 2950 chrX 10772678 10772693 chrX 10772759 10772777 Tirant 6 81 3.0 2.0 2.5 1.7 99 chrX 10772678 intron CG15211 + chrX 10772728 intron CG15211 + chrX 10772777 intron CG15211 + chrX_6_10770001 chrX_10770001 RC1_1-HE 2951 chrX 10933923 10933943 chrX 10934012 10934032 6 89 0.5 2.5 1.5 2.4 109 chrX 10933923 intron Myo10A + chrX 10933978 intron Myo10A + chrX 10934032 intron Myo10A + chrX_6_10930001 chrX_10930001 RC1_1-HE 2952 chrX 10937694 10937713 chrX 10937835 10937854 5 141 1.0 5.0 3.0 1.2 160 chrX 10937694 intron Myo10A + chrX 10937774 intron Myo10A + chrX 10937854 intron Myo10A + chrX_5_10935001 chrX_10935001 RC1_1-HE 2953 chrX 10982956 10982985 chrX 10983032 10983066 11 80 0.5 1.5 1.0 5.5 110 chrX 10982956 intron CG42339 - chrX 10983011 intron CG42339 - chrX 10983066 intron CG42339 - chrX_11_10980001 chrX_10980001 RC1_1-HE 2954 chrX 11006239 11006259 chrX 11006356 11006382 6 122 5.0 5.0 5.0 1.0 143 chrX 11006239 intron CG42339 - chrX 11006310 intron CG42339 - chrX 11006382 intron CG42339 - chrX_6_11005001 chrX_11005001 RC1_1-HE 2955 chrX 11096011 11096030 chrX 11103114 11103133 HMS-Beagle 4 7103 1.0 3.5 2.2 1.2 7122 chrX 11096011 intergenic not near genes chrX 11099572 intergenic not near genes chrX 11103133 intron CG42249 + chrX_4_11095001 chrX_11095001 RC1_1-HE 2956 chrX 11194451 11194461 chrX 11201873 11201883 gypsy5 4 7422 6.0 9.5 7.8 0.5 7432 chrX 11194451 intergenic not near genes chrX 11198167 intergenic not near genes chrX 11201883 intergenic CG11106 + chrX_4_11195001 chrX_11195001 RC1_1-HE 2957 chrX 11243609 11243633 chrX 11243787 11243811 6 178 0.0 6.0 3.0 1.5 202 chrX 11243609 intron CG44422 - chrX 11243710 intron CG44422 - chrX 11243811 intron CG44422 - chrX_6_11240001 chrX_11240001 RC1_1-HE 2958 chrX 11268559 11268594 chrX 11270053 11270088 hopper2 19 1493 4.5 4.5 4.5 3.5 1529 chrX 11268559 intron CG44422 - chrX 11269324 intron CG44422 - chrX 11270088 intron CG44422 - chrX_19_11265001 chrX_11265001 RC1_1-HE 2959 chrX 11281996 11282022 chrX 11282072 11282099 7 77 0.5 3.5 2.0 2.3 103 chrX 11281996 intron CG44422 - chrX 11282048 intron CG44422 - chrX 11282099 intron CG44422 - chrX_7_11280001 chrX_11280001 RC1_1-HE 2960 chrX 11312061 11312088 chrX 11319414 11319442 Stalker2 5 7354 1.0 3.0 2.0 1.7 7381 chrX 11312061 intergenic not near genes chrX 11315752 intergenic not near genes chrX 11319442 intergenic not near genes chrX_5_11315001 chrX_11315001 RC1_1-HE 2961 chrX 11374644 11374672 chrX 11374727 11374755 12 83 3.5 3.0 3.2 2.9 111 chrX 11374644 intron dlg1 + chrX 11374700 intron dlg1 + chrX 11374755 intron dlg1 + chrX_12_11370001 chrX_11370001 RC1_1-HE 2962 chrX 11431522 11431556 chrX 11431606 11431640 8 82 3.0 1.0 2.0 2.7 118 chrX 11431522 3` UTR Evi5 - chrX 11431581 3` UTR Evi5 - chrX 11431640 3` UTR Evi5 - chrX_8_11430001 chrX_11430001 RC1_1-HE 2963 chrX 11442007 11442026 chrX 11442085 11442104 6 78 0.5 2.5 1.5 2.4 97 chrX 11442007 intron Evi5 - chrX 11442056 intron Evi5 - chrX 11442104 intron Evi5 - chrX_6_11440001 chrX_11440001 RC1_1-HE 2964 chrX 11535042 11535044 chrX 11541513 11541515 Burdock 4 6471 7.5 0.0 3.8 0.8 6473 chrX 11535042 intron Drak + chrX 11538278 intron Drak + chrX 11541515 intron Drak + chrX_4_11535001 chrX_11535001 RC1_1-HE 2965 chrX 11610894 11610925 chrX 11610991 11611022 7 97 2.5 0.0 1.2 3.2 128 chrX 11610894 intron CG2247 - chrX 11610958 intron CG2247 - chrX 11611022 intron CG2247 - chrX_7_11610001 chrX_11610001 RC1_1-HE 2966 chrX 11633414 11633450 chrX 11640469 11640505 297 14 7055 6.0 3.5 4.8 2.4 7091 chrX 11633414 intron Ptp10D + chrX 11636960 intron Ptp10D + chrX 11640505 intron Ptp10D + chrX_14_11635001 chrX_11635001 RC1_1-HE 2967 chrX 11645106 11645146 chrX 11648276 11648317 NOF 6 3171 3.0 3.5 3.2 1.4 3211 chrX 11645106 intron Ptp10D + chrX 11646712 intron Ptp10D + chrX 11648317 intron Ptp10D + chrX_6_11645001 chrX_11645001 RC1_1-HE 2968 chrX 11821506 11821536 chrX 11821585 11821605 8 77 1.5 0.0 0.8 4.4 99 chrX 11821506 intron rudhira + chrX 11821556 intron rudhira + chrX 11821605 intron rudhira + chrX_8_11820001 chrX_11820001 RC1_1-HE 2969 chrX 11999760 11999781 chrX 11999844 11999865 6 84 3.5 2.0 2.8 1.6 105 chrX 11999760 intron fw - chrX 11999812 intron fw - chrX 11999865 intron fw - chrX_6_11995001 chrX_11995001 RC1_1-HE 2970 chrX 12001589 12001624 chrX 12001668 12001702 8 78 0.5 0.0 0.2 6.7 113 chrX 12001589 intron fw - chrX 12001646 intron fw - chrX 12001702 intron fw - chrX_8_12000001 chrX_12000001 RC1_1-HE 2971 chrX 12074394 12074415 chrX 12074487 12074508 11 93 0.0 2.5 1.2 5.0 114 chrX 12074394 intron,intron CR43960 +,Ten-a + chrX 12074451 intron,intron CR43960 +,Ten-a + chrX 12074508 intron,intron CR43960 +,Ten-a + chrX_11_12070001 chrX_12070001 RC1_1-HE 2972 chrX 12142196 12142221 chrX 12142285 12142310 13 89 3.5 6.5 5.0 2.2 114 chrX 12142196 intron Ten-a + chrX 12142253 intron Ten-a + chrX 12142310 intron Ten-a + chrX_13_12140001 chrX_12140001 RC1_1-HE 2973 chrX 12168136 12168166 chrX 12173579 12173609 I-element 7 5443 6.0 2.0 4.0 1.4 5473 chrX 12168136 intron Ten-a + chrX 12170872 intron Ten-a + chrX 12173609 intron Ten-a + chrX_7_12170001 chrX_12170001 RC1_1-HE 2974 chrX 12202293 12202313 chrX 12202385 12202405 10 92 6.0 0.0 3.0 2.5 112 chrX 12202293 intron Ten-a + chrX 12202349 intron Ten-a + chrX 12202405 intron Ten-a + chrX_10_12200001 chrX_12200001 RC1_1-HE 2975 chrX 12202767 12202802 chrX 12202852 12202887 13 83 1.0 5.0 3.0 3.2 120 chrX 12202767 intron Ten-a + chrX 12202827 intron Ten-a + chrX 12202887 intron Ten-a + chrX_13_12200001 chrX_12200001 RC1_1-HE 2976 chrX 12231209 12231219 chrX 12231297 12231307 4 88 0.0 1.5 0.8 2.2 98 chrX 12231209 intron Ten-a + chrX 12231258 intron Ten-a + chrX 12231307 intron Ten-a + chrX_4_12230001 chrX_12230001 RC1_1-HE 2977 chrX 12240658 12240696 chrX 12240757 12240795 7 99 3.5 1.0 2.2 2.2 137 chrX 12240658 intron Ten-a + chrX 12240726 intron Ten-a + chrX 12240795 intron Ten-a + chrX_7_12240001 chrX_12240001 RC1_1-HE 2978 chrX 12241115 12241142 chrX 12241203 12241230 13 88 7.5 0.0 3.8 2.7 115 chrX 12241115 intron Ten-a + chrX 12241172 intron Ten-a + chrX 12241230 intron Ten-a + chrX_13_12240001 chrX_12240001 RC1_1-HE 2979 chrX 12246985 12246988 chrX 12247074 12247077 4 89 5.5 8.5 7.0 0.5 92 chrX 12246985 intron Ten-a + chrX 12247031 intron Ten-a + chrX 12247077 intron Ten-a + chrX_4_12245001 chrX_12245001 RC1_1-HE 2980 chrX 12254560 12254576 chrX 12254942 12254965 6 383 37.0 38.0 37.5 0.2 405 chrX 12254560 intron Ten-a + chrX 12254762 intron Ten-a + chrX 12254965 intron Ten-a + chrX_6_12250001 chrX_12250001 RC1_1-HE 2981 chrX 5377965 5377989 chrX 12297841 12297845 5 6919869 14.0 7.5 10.8 0.4 6919880 chrX 5377965 intron SK + chrX 8837905 intergenic CG12075 + chrX 12297845 intron Ten-a + chrX_5_8835001 chrX_8835001 RC1_1-HE 2982 chrX 12375493 12375513 chrX 12375592 12375612 6 99 0.0 6.0 3.0 1.5 119 chrX 12375493 intergenic Ir11a - chrX 12375552 intergenic Ir11a - chrX 12375612 exon Ir11a - chrX_6_12375001 chrX_12375001 RC1_1-HE 2983 chrX 12392794 12392830 chrX 12392876 12392912 18 81 4.0 3.5 3.8 3.8 118 chrX 12392794 intergenic not near genes chrX 12392853 intergenic not near genes chrX 12392912 intergenic not near genes chrX_18_12390001 chrX_12390001 RC1_1-HE 2984 chrX 12399718 12399729 chrX 12399873 12399884 5 155 3.0 1.0 2.0 1.7 166 chrX 12399718 intergenic not near genes chrX 12399801 intergenic not near genes chrX 12399884 intergenic not near genes chrX_5_12395001 chrX_12395001 RC1_1-HE 2985 chrX 12430946 12430958 chrX 12431025 12431037 6 78 6.5 7.0 6.8 0.8 91 chrX 12430946 intergenic not near genes chrX 12430992 intergenic not near genes chrX 12431037 intergenic not near genes chrX_6_12430001 chrX_12430001 RC1_1-HE 2986 chrX 12449748 12449756 chrX 12449829 12449837 5 81 7.0 0.0 3.5 1.1 89 chrX 12449748 intron Pkcdelta + chrX 12449792 intron Pkcdelta + chrX 12449837 intron Pkcdelta + chrX_5_12445001 chrX_12445001 RC1_1-HE 2987 chrX 12461274 12461281 chrX 12461339 12461359 5 75 3.5 1.0 2.2 1.6 85 chrX 12461274 intron Rab40 - chrX 12461316 intron Rab40 - chrX 12461359 intron Rab40 - chrX_5_12460001 chrX_12460001 RC1_1-HE 2988 chrX 12465479 12465496 chrX 12465556 12465573 7 77 5.0 2.0 3.5 1.6 94 chrX 12465479 exon CG42258 + chrX 12465526 intron CG42258 + chrX 12465573 intron CG42258 + chrX_7_12465001 chrX_12465001 RC1_1-HE 2989 chrX 12472324 12472330 chrX 12472404 12472410 4 80 0.0 0.0 0.0 4.0 86 chrX 12472324 intron CG42258 + chrX 12472367 intron CG42258 + chrX 12472410 intron CG42258 + chrX_4_12470001 chrX_12470001 RC1_1-HE 2990 chrX 12511323 12511338 chrX 12511413 12511428 8 90 1.5 6.0 3.8 1.7 105 chrX 12511323 intron CG2556 + chrX 12511376 intron CG2556 + chrX 12511428 intron CG2556 + chrX_8_12510001 chrX_12510001 RC1_1-HE 2991 chrX 12531710 12531742 chrX 12531793 12531825 9 83 4.5 2.0 3.2 2.1 115 chrX 12531710 intron CG43921 - chrX 12531768 intron CG43921 - chrX 12531825 intron CG43921 - chrX_9_12530001 chrX_12530001 RC1_1-HE 2992 chrX 12597204 12597210 chrX 12597282 12597288 4 78 4.5 8.5 6.5 0.5 84 chrX 12597204 intron Sec16 + chrX 12597246 intron Sec16 + chrX 12597288 intron Sec16 + chrX_4_12595001 chrX_12595001 RC1_1-HE 2993 chrX 12643227 12643255 chrX 12643322 12643350 5 95 5.5 2.0 3.8 1.0 123 chrX 12643227 intron Tomosyn + chrX 12643288 intron Tomosyn + chrX 12643350 intron Tomosyn + chrX_5_12640001 chrX_12640001 RC1_1-HE 2994 chrX 12649915 12649915 chrX 14812623 14812656 9 2162729 7.0 16.0 11.5 0.7 2162741 chrX 12649915 intron Tomosyn + chrX 13731286 intron g - chrX 14812656 intron rut - chrX_9_13730001 chrX_13730001 RC1_1-HE 2995 chrX 12670640 12670664 chrX 12670728 12670752 6 88 4.5 4.0 4.2 1.2 112 chrX 12670640 intron Tis11 + chrX 12670696 intron Tis11 + chrX 12670752 intron Tis11 + chrX_6_12670001 chrX_12670001 RC1_1-HE 2996 chrX 12699575 12699581 chrX 12699657 12699663 7 82 10.5 0.5 5.5 1.1 88 chrX 12699575 intron Smr - chrX 12699619 intron Smr - chrX 12699663 intron Smr - chrX_7_12695001 chrX_12695001 RC1_1-HE 2997 chrX 12896282 12896304 chrX 12896361 12896383 6 79 3.5 3.0 3.2 1.4 101 chrX 12896282 intron Pde9 - chrX 12896332 intron Pde9 - chrX 12896383 intron Pde9 - chrX_6_12895001 chrX_12895001 RC1_1-HE 2998 chrX 12912346 12912376 chrX 12912425 12912455 7 78 2.0 3.0 2.5 2.0 109 chrX 12912346 intergenic CR45625 +,CG4645 + chrX 12912400 intergenic CR45625 +,CG4645 + chrX 12912455 intergenic CR45625 +,CG4645 + chrX_7_12910001 chrX_12910001 RC1_1-HE 2999 chrX 12649914 12649914 chrX 12916576 12916582 5 266664 7.0 14.0 10.5 0.4 266668 chrX 12649914 intron Tomosyn + chrX 12783248 exon CG32647 - chrX 12916582 intergenic not near genes chrX_5_12780001 chrX_12780001 RC1_1-HE 3000 chrX 12930595 12930605 chrX 12937712 12937722 HMS-Beagle 5 7117 4.0 4.0 4.0 1.0 7127 chrX 12930595 intron fne + chrX 12934158 intron fne + chrX 12937722 intron fne + chrX_5_12930001 chrX_12930001 RC1_1-HE 3001 chrX 12953893 12953906 chrX 12954032 12954042 9 139 5.5 1.5 3.5 2.0 149 chrX 12953893 intron hec - chrX 12953968 intron hec - chrX 12954042 intron hec - chrX_9_12950001 chrX_12950001 RC1_1-HE 3002 chrX 13018521 13018529 chrX 13018605 13018613 7 84 2.0 1.5 1.8 2.5 92 chrX 13018521 intron rad + chrX 13018567 intron rad + chrX 13018613 intron rad + chrX_7_13015001 chrX_13015001 RC1_1-HE 3003 chrX 13104089 13104112 chrX 13104171 13104171 10 80 0.0 1.0 0.5 6.7 82 chrX 13104089 intron CG43313 - chrX 13104130 intron CG43313 - chrX 13104171 intron CG43313 - chrX_10_13100001 chrX_13100001 RC1_1-HE 3004 chrX 13105994 13106024 chrX 13106082 13106112 9 88 2.0 1.0 1.5 3.6 118 chrX 13105994 intron CG43313 - chrX 13106053 intron CG43313 - chrX 13106112 intron CG43313 - chrX_9_13105001 chrX_13105001 RC1_1-HE 3005 chrX 13146595 13146631 chrX 13146684 13146720 8 88 5.0 2.5 3.8 1.7 125 chrX 13146595 intron CG32645 + chrX 13146658 intron CG32645 + chrX 13146720 intron CG32645 + chrX_8_13145001 chrX_13145001 RC1_1-HE 3006 chrX 13164230 13164258 chrX 13164308 13164336 7 78 1.5 2.0 1.8 2.5 106 chrX 13164230 intron CG34411 - chrX 13164283 intron CG34411 - chrX 13164336 intron CG34411 - chrX_7_13160001 chrX_13160001 RC1_1-HE 3007 chrX 13172348 13172380 chrX 13172425 13172457 15 75 2.5 5.5 4.0 3.0 109 chrX 13172348 exon CG34411 - chrX 13172402 intron CG34411 - chrX 13172457 intron CG34411 - chrX_15_13170001 chrX_13170001 RC1_1-HE 3008 chrX 13210058 13210064 chrX 13210141 13210164 4 96 1.0 6.5 3.8 0.8 106 chrX 13210058 intron sno - chrX 13210111 intron sno - chrX 13210164 intron sno - chrX_4_13210001 chrX_13210001 RC1_1-HE 3009 chrX 13236882 13236899 chrX 13236968 13236985 6 86 0.0 7.5 3.8 1.2 103 chrX 13236882 intron mew - chrX 13236934 intron mew - chrX 13236985 intron mew - chrX_6_13235001 chrX_13235001 RC1_1-HE 3010 chrX 12649914 12649914 chrX 13251647 13251653 4 601735 7.0 27.5 17.2 0.2 601739 chrX 12649914 intron Tomosyn + chrX 12950784 3` UTR hec - chrX 13251653 intron mew - chrX_4_12950001 chrX_12950001 RC1_1-HE 3011 chrX 13262519 13262524 chrX 13262601 13262606 4 82 0.0 3.0 1.5 1.6 87 chrX 13262519 intergenic comt +,HDAC4 - chrX 13262562 intergenic comt +,HDAC4 - chrX 13262606 intergenic HDAC4 -,comt + chrX_4_13260001 chrX_13260001 RC1_1-HE 3012 chrX 13265942 13265968 chrX 13266023 13266049 9 81 2.0 2.5 2.2 2.8 107 chrX 13265942 exon HDAC4 - chrX 13265996 intron HDAC4 - chrX 13266049 exon HDAC4 - chrX_9_13265001 chrX_13265001 RC1_1-HE 3013 chrX 13278158 13278184 chrX 13278242 13278268 9 84 4.5 0.5 2.5 2.6 110 chrX 13278158 intron HDAC4 - chrX 13278213 intron HDAC4 - chrX 13278268 intron HDAC4 - chrX_9_13275001 chrX_13275001 RC1_1-HE 3014 chrX 13320295 13320322 chrX 13320464 13320492 15 169 3.5 4.5 4.0 3.0 197 chrX 13320295 intron IP3K2 + chrX 13320394 intron IP3K2 + chrX 13320492 intron IP3K2 + chrX_15_13320001 chrX_13320001 RC1_1-HE 3015 chrX 13333589 13333618 chrX 13333666 13333672 6 73 4.5 4.0 4.2 1.2 83 chrX 13333589 intergenic not near genes chrX 13333630 intergenic not near genes chrX 13333672 intergenic not near genes chrX_6_13330001 chrX_13330001 RC1_1-HE 3016 chrX 13401481 13401522 chrX 13401834 13401874 jockey 4 352 1.5 1.5 1.5 1.6 393 chrX 13401481 intergenic CG1673 +,CG12725 - chrX 13401678 intergenic CG12725 -,CG1673 + chrX 13401874 3` UTR CG12725 - chrX_4_13400001 chrX_13400001 RC1_1-HE 3017 chrX 13403020 13403042 chrX 13403148 13403170 X-element 8 128 6.0 1.0 3.5 1.8 150 chrX 13403020 intergenic CG12725 - chrX 13403095 intergenic CG12725 - chrX 13403170 intergenic CG12725 - chrX_8_13400001 chrX_13400001 RC1_1-HE 3018 chrX 13406755 13406764 chrX 13406832 13406841 5 77 2.5 1.5 2.0 1.7 86 chrX 13406755 intron GstT4 + chrX 13406798 intron GstT4 + chrX 13406841 intron GstT4 + chrX_5_13405001 chrX_13405001 RC1_1-HE 3019 chrX 13429459 13429489 chrX 13430609 13430639 jockey 15 1150 3.5 2.0 2.8 3.9 1180 chrX 13429459 intergenic not near genes chrX 13430049 intergenic not near genes chrX 13430639 intergenic not near genes chrX_15_13430001 chrX_13430001 RC1_1-HE 3020 chrX 13628440 13628458 chrX 13628525 13628543 5 85 1.0 1.5 1.2 2.3 103 chrX 13628440 intron NFAT + chrX 13628492 intron NFAT + chrX 13628543 intron NFAT + chrX_5_13625001 chrX_13625001 RC1_1-HE 3021 chrX 13653608 13653631 chrX 13653690 13653713 9 82 5.5 2.5 4.0 1.8 105 chrX 13653608 intron NFAT + chrX 13653660 intron NFAT + chrX 13653713 intron NFAT + chrX_9_13650001 chrX_13650001 RC1_1-HE 3022 chrX 13739026 13739061 chrX 13739108 13739143 14 80 4.0 4.5 4.2 2.7 117 chrX 13739026 intron,exon Grip91 -,CG11134 + chrX 13739084 intron,3` UTR Grip91 -,CG11134 + chrX 13739143 intron,3` UTR Grip91 -,CG11134 + chrX_14_13735001 chrX_13735001 RC1_1-HE 3023 chrX 13793369 13793401 chrX 13793452 13793484 14 83 2.0 3.5 2.8 3.7 115 chrX 13793369 intron inaE + chrX 13793426 intron inaE + chrX 13793484 intron inaE + chrX_14_13790001 chrX_13790001 RC1_1-HE 3024 chrX 13795000 13795032 chrX 13795092 13795124 9 92 5.0 4.5 4.8 1.6 124 chrX 13795000 intron inaE + chrX 13795062 intron inaE + chrX 13795124 intron inaE + chrX_9_13795001 chrX_13795001 RC1_1-HE 3025 chrX 13875956 13875991 chrX 13876041 13876076 12 84 2.5 0.0 1.2 5.5 120 chrX 13875956 intron mamo - chrX 13876016 intron mamo - chrX 13876076 intron mamo - chrX_12_13875001 chrX_13875001 RC1_1-HE 3026 chrX 13895087 13895109 chrX 13895168 13895182 8 79 6.0 5.0 5.5 1.2 95 chrX 13895087 intron mamo - chrX 13895134 intron mamo - chrX 13895182 intron mamo - chrX_8_13895001 chrX_13895001 RC1_1-HE 3027 chrX 13915426 13915440 chrX 13915504 13915518 4 78 2.0 2.0 2.0 1.3 92 chrX 13915426 intron mamo - chrX 13915472 intron mamo - chrX 13915518 intron mamo - chrX_4_13915001 chrX_13915001 RC1_1-HE 3028 chrX 13935514 13935523 chrX 13935598 13935607 7 84 6.0 11.5 8.8 0.7 93 chrX 13935514 intron mamo - chrX 13935560 intron mamo - chrX 13935607 intron mamo - chrX_7_13935001 chrX_13935001 RC1_1-HE 3029 chrX 13937979 13938011 chrX 13941251 13941283 I-element 5 3272 1.0 0.5 0.8 2.8 3304 chrX 13937979 intron mamo - chrX 13939631 intron mamo - chrX 13941283 intron mamo - chrX_5_13935001 chrX_13935001 RC1_1-HE 3030 chrX 13991418 13991439 chrX 13991502 13991523 4 84 0.0 1.5 0.8 2.2 105 chrX 13991418 intergenic CR44655 + chrX 13991470 intergenic CR44655 + chrX 13991523 intergenic CR44655 + chrX_4_13990001 chrX_13990001 RC1_1-HE 3031 chrX 14039980 14040008 chrX 14040070 14040098 4 90 1.0 0.0 0.5 2.7 118 chrX 14039980 intergenic not near genes chrX 14040039 intergenic not near genes chrX 14040098 intergenic not near genes chrX_4_14040001 chrX_14040001 RC1_1-HE 3032 chrX 14073727 14073739 chrX 14073815 14073827 9 88 2.0 5.0 3.5 2.0 100 chrX 14073727 intergenic not near genes chrX 14073777 intergenic not near genes chrX 14073827 intergenic not near genes chrX_9_14070001 chrX_14070001 RC1_1-HE 3033 chrX 14105020 14105056 chrX 14114171 14114208 roo 16 9152 2.0 2.5 2.2 5.0 9188 chrX 14105020 intergenic not near genes chrX 14109614 intergenic not near genes chrX 14114208 5` UTR CR44657 + chrX_16_14105001 chrX_14105001 RC1_1-HE 3034 chrX 14157590 14157619 chrX 14163248 14163277 297 10 5658 2.5 3.5 3.0 2.5 5687 chrX 14157590 intergenic not near genes chrX 14160434 intergenic not near genes chrX 14163277 intergenic not near genes chrX_10_14160001 chrX_14160001 RC1_1-HE 3035 chrX 14166773 14166803 chrX 14166898 14166928 10 124 4.0 3.0 3.5 2.2 155 chrX 14166773 intergenic not near genes chrX 14166850 intergenic not near genes chrX 14166928 intergenic not near genes chrX_10_14165001 chrX_14165001 RC1_1-HE 3036 chrX 14175154 14175162 chrX 14175235 14175243 4 81 6.0 6.0 6.0 0.6 89 chrX 14175154 exon CG1368 + chrX 14175198 exon CG1368 + chrX 14175243 exon CG1368 + chrX_4_14175001 chrX_14175001 RC1_1-HE 3037 chrX 14185041 14185281 chrX 14185125 14185410 9 79 3.5 4.0 3.8 1.9 369 chrX 14185041 exon CG32603 + chrX 14185226 exon CG32603 + chrX 14185410 exon CG32603 + chrX_9_14185001 chrX_14185001 RC1_1-HE 3038 chrX 14209471 14209476 chrX 14209565 14209570 4 94 3.0 4.0 3.5 0.9 99 chrX 14209471 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209520 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209570 intron,intron l(1)G0007 +,l(1)G0469 - chrX_4_14205001 chrX_14205001 RC1_1-HE 3039 chrX 14321910 14321912 chrX 14371752 14371760 4 49846 13.5 10.5 12.0 0.3 49850 chrX 14321910 intergenic dpr8 + chrX 14346835 intron dpr8 + chrX 14371760 intron dpr8 + chrX_4_14345001 chrX_14345001 RC1_1-HE 3040 chrX 14333284 14333320 chrX 14333367 14333403 7 78 1.0 2.5 1.8 2.5 119 chrX 14333284 intron dpr8 + chrX 14333344 intron dpr8 + chrX 14333403 intron dpr8 + chrX_7_14330001 chrX_14330001 RC1_1-HE 3041 chrX 14401021 14401049 chrX 14401128 14401156 18 107 8.0 4.5 6.2 2.5 135 chrX 14401021 intron dpr8 + chrX 14401088 intron dpr8 + chrX 14401156 intron dpr8 + chrX_18_14400001 chrX_14400001 RC1_1-HE 3042 chrX 14401548 14401557 chrX 14401658 14401667 6 110 9.0 0.0 4.5 1.1 119 chrX 14401548 intron dpr8 + chrX 14401608 intron dpr8 + chrX 14401667 intron dpr8 + chrX_6_14400001 chrX_14400001 RC1_1-HE 3043 chrX 14416309 14416341 chrX 14421078 14421109 F-element 14 4768 4.5 4.5 4.5 2.5 4800 chrX 14416309 intron dpr8 + chrX 14418709 intron dpr8 + chrX 14421109 intron dpr8 + chrX_14_14415001 chrX_14415001 RC1_1-HE 3044 chrX 14589685 14589703 chrX 14589927 14589945 pogo 9 242 0.0 0.0 0.0 9.0 260 chrX 14589685 intron CG9413 - chrX 14589815 intron CG9413 - chrX 14589945 intron CG9413 - chrX_9_14585001 chrX_14585001 RC1_1-HE 3045 chrX 14597737 14597750 chrX 14597815 14597828 4 78 3.0 2.5 2.8 1.1 91 chrX 14597737 intron CG9413 - chrX 14597782 intron CG9413 - chrX 14597828 intron CG9413 - chrX_4_14595001 chrX_14595001 RC1_1-HE 3046 chrX 14636461 14636493 chrX 14641903 14641935 I-element 15 5442 5.0 3.0 4.0 3.0 5474 chrX 14636461 intron NetA - chrX 14639198 intron NetA - chrX 14641935 intron NetA - chrX_15_14635001 chrX_14635001 RC1_1-HE 3047 chrX 14742148 14742176 chrX 14742238 14742266 15 90 5.0 6.5 5.8 2.2 118 chrX 14742148 intron NetB - chrX 14742207 intron NetB - chrX 14742266 intron NetB - chrX_15_14740001 chrX_14740001 RC1_1-HE 3048 chrX 14742913 14742951 chrX 14743000 14743022 11 85 8.5 9.5 9.0 1.1 109 chrX 14742913 intron NetB - chrX 14742968 intron NetB - chrX 14743022 intron NetB - chrX_11_14740001 chrX_14740001 RC1_1-HE 3049 chrX 14774987 14775010 chrX 14775065 14775088 7 78 3.5 4.5 4.0 1.4 101 chrX 14774987 intergenic CG5334 + chrX 14775038 intergenic CG5334 + chrX 14775088 intergenic CG5334 + chrX_7_14775001 chrX_14775001 RC1_1-HE 3050 chrX 14778024 14778061 chrX 14782822 14782859 Doc 9 4798 2.0 3.5 2.8 2.4 4835 chrX 14778024 intergenic CG5347 + chrX 14780442 intergenic not near genes chrX 14782859 intergenic Ag5r2 - chrX_9_14780001 chrX_14780001 RC1_1-HE 3051 chrX 14784274 14784298 chrX 14784357 14784365 8 81 3.0 4.0 3.5 1.8 91 chrX 14784274 intergenic Ag5r2 -,Ag5r - chrX 14784320 intergenic Ag5r2 -,Ag5r - chrX 14784365 intergenic Ag5r -,Ag5r2 - chrX_8_14780001 chrX_14780001 RC1_1-HE 3052 chrX 14786728 14786754 chrX 14786824 14786850 8 96 5.0 0.0 2.5 2.3 122 chrX 14786728 intron CR45522 + chrX 14786789 5` UTR CR45522 + chrX 14786850 5` UTR CR45522 + chrX_8_14785001 chrX_14785001 RC1_1-HE 3053 chrX 14799693 14799722 chrX 14799790 14799819 5 97 6.0 4.0 5.0 0.8 126 chrX 14799693 intron rut - chrX 14799756 intron rut - chrX 14799819 intron rut - chrX_5_14795001 chrX_14795001 RC1_1-HE 3054 chrX 14806758 14806789 chrX 14806847 14806873 14 89 2.5 0.0 1.2 6.4 115 chrX 14806758 intron rut - chrX 14806816 intron rut - chrX 14806873 intron rut - chrX_14_14805001 chrX_14805001 RC1_1-HE 3055 chrX 14818761 14818791 chrX 14823966 14823996 copia 5 5202 4.0 3.0 3.5 1.1 5235 chrX 14818761 intron rut - chrX 14821378 intron rut - chrX 14823996 intron rut - chrX_5_14820001 chrX_14820001 RC1_1-HE 3056 chrX 14861934 14861952 chrX 14862147 14862165 5 213 19.0 24.0 21.5 0.2 231 chrX 14861934 intron Flo2 + chrX 14862050 intron Flo2 + chrX 14862165 intron Flo2 + chrX_5_14860001 chrX_14860001 RC1_1-HE 3057 chrX 14867839 14867861 chrX 14867917 14867939 15 78 2.5 3.5 3.0 3.8 100 chrX 14867839 intron,intron Flo2 +,CG9518 - chrX 14867889 intron,intron Flo2 +,CG9518 - chrX 14867939 intron,intron Flo2 +,CG9518 - chrX_15_14865001 chrX_14865001 RC1_1-HE 3058 chrX 14950067 14950076 chrX 14950145 14950153 4 78 8.0 0.0 4.0 0.8 86 chrX 14950067 intron pdgy - chrX 14950110 intron pdgy - chrX 14950153 intron pdgy - chrX_4_14950001 chrX_14950001 RC1_1-HE 3059 chrX 14968072 14968099 chrX 14968152 14968179 13 80 8.0 5.5 6.8 1.7 107 chrX 14968072 intron eag + chrX 14968126 intron eag + chrX 14968179 intron eag + chrX_13_14965001 chrX_14965001 RC1_1-HE 3060 chrX 14970666 14970687 chrX 14970745 14970766 7 79 7.0 1.5 4.2 1.3 100 chrX 14970666 intron eag + chrX 14970716 intron eag + chrX 14970766 intron eag + chrX_7_14970001 chrX_14970001 RC1_1-HE 3061 chrX 15070194 15070210 chrX 15070288 15070304 7 94 3.0 0.0 1.5 2.8 110 chrX 15070194 3` UTR Lsd-2 - chrX 15070249 3` UTR Lsd-2 - chrX 15070304 3` UTR Lsd-2 - chrX_7_15070001 chrX_15070001 RC1_1-HE 3062 chrX 15114149 15114180 chrX 15114880 15114911 5 731 10.5 12.5 11.5 0.4 762 chrX 15114149 intron Cyp4s3 - chrX 15114530 intron Cyp4s3 - chrX 15114911 exon Cyp4s3 - chrX_5_15110001 chrX_15110001 RC1_1-HE 3063 chrX 15126396 15126430 chrX 15126474 15126507 10 78 3.5 4.5 4.0 2.0 111 chrX 15126396 exon drd + chrX 15126452 intron drd + chrX 15126507 intron drd + chrX_10_15125001 chrX_15125001 RC1_1-HE 3064 chrX 15191726 15191761 chrX 15191804 15191839 12 75 5.5 4.0 4.8 2.1 113 chrX 15191726 intergenic not near genes chrX 15191782 intergenic not near genes chrX 15191839 intergenic not near genes chrX_12_15190001 chrX_15190001 RC1_1-HE 3065 chrX 15247449 15247461 chrX 15247542 15247554 4 92 6.0 5.5 5.8 0.6 105 chrX 15247449 intergenic not near genes chrX 15247502 intergenic not near genes chrX 15247554 intergenic not near genes chrX_4_15245001 chrX_15245001 RC1_1-HE 3066 chrX 15262373 15262390 chrX 15262564 15262581 8 191 7.0 3.5 5.2 1.3 208 chrX 15262373 intergenic not near genes chrX 15262477 intergenic not near genes chrX 15262581 intergenic not near genes chrX_8_15260001 chrX_15260001 RC1_1-HE 3067 chrX 15273700 15273739 chrX 15274868 15274907 1360 19 1167 6.5 5.5 6.0 2.7 1207 chrX 15273700 intergenic not near genes chrX 15274304 intergenic not near genes chrX 15274907 intergenic not near genes chrX_19_15270001 chrX_15270001 RC1_1-HE 3068 chrX 15276669 15276689 chrX 15276758 15276784 8 94 4.5 4.5 4.5 1.5 115 chrX 15276669 intergenic not near genes chrX 15276726 intergenic not near genes chrX 15276784 intergenic not near genes chrX_8_15275001 chrX_15275001 RC1_1-HE 3069 chrX 15288445 15288478 chrX 15288526 15288543 12 79 0.5 4.5 2.5 3.4 98 chrX 15288445 intergenic not near genes chrX 15288494 intergenic not near genes chrX 15288543 intergenic not near genes chrX_12_15285001 chrX_15285001 RC1_1-HE 3070 chrX 15340774 15340785 chrX 15340844 15340848 4 72 8.0 7.5 7.8 0.5 74 chrX 15340774 exon CG9123 - chrX 15340811 exon CG9123 - chrX 15340848 exon CG9123 - chrX_4_15340001 chrX_15340001 RC1_1-HE 3071 chrX 15409660 15409677 chrX 15409740 15409757 16 80 8.0 6.0 7.0 2.0 97 chrX 15409660 intron Cngl - chrX 15409708 intron Cngl - chrX 15409757 intron Cngl - chrX_16_15405001 chrX_15405001 RC1_1-HE 3072 chrX 15413048 15413084 chrX 15417351 15417387 Juan 22 4303 6.0 4.0 5.0 3.7 4339 chrX 15413048 intron Cngl - chrX 15415218 intron Cngl - chrX 15417387 intron Cngl - chrX_22_15415001 chrX_15415001 RC1_1-HE 3073 chrX 15421919 15421952 chrX 15423431 15423464 pogo 13 1512 3.0 5.0 4.0 2.6 1545 chrX 15421919 intron Cngl - chrX 15422692 intron Cngl - chrX 15423464 intron Cngl - chrX_13_15420001 chrX_15420001 RC1_1-HE 3074 chrX 15435691 15435704 chrX 15436118 15436138 rover 8 433 1.0 11.5 6.2 1.1 447 chrX 15435691 intron Cngl - chrX 15435914 intron Cngl - chrX 15436138 intron Cngl - chrX_8_15435001 chrX_15435001 RC1_1-HE 3075 chrX 15535960 15535986 chrX 15536099 15536126 8 140 4.5 2.0 3.2 1.9 166 chrX 15535960 intron Ac13E - chrX 15536043 intron Ac13E - chrX 15536126 intron Ac13E - chrX_8_15535001 chrX_15535001 RC1_1-HE 3076 chrX 15543393 15543397 chrX 16832330 16832334 4 1288938 9.0 21.0 15.0 0.2 1288941 chrX 15543393 intron Ac13E - chrX 16187864 intergenic not near genes chrX 16832334 intron CG13004 - chrX_4_16185001 chrX_16185001 RC1_1-HE 3077 chrX 15580800 15580826 chrX 15580882 15580908 8 82 3.0 1.5 2.2 2.5 108 chrX 15580800 intergenic CG9215 - chrX 15580854 intergenic CG9215 - chrX 15580908 intergenic CG9215 - chrX_8_15580001 chrX_15580001 RC1_1-HE 3078 chrX 15669927 15669942 chrX 15670010 15670025 4 83 0.0 2.5 1.2 1.8 98 chrX 15669927 intron CG15646 - chrX 15669976 intron CG15646 - chrX 15670025 intron CG15646 - chrX_4_15665001 chrX_15665001 RC1_1-HE 3079 chrX 15672907 15672916 chrX 15672997 15673006 4 90 3.5 0.5 2.0 1.3 99 chrX 15672907 intergenic not near genes chrX 15672956 intergenic not near genes chrX 15673006 intergenic not near genes chrX_4_15670001 chrX_15670001 RC1_1-HE 3080 chrX 15726420 15726434 chrX 15726493 15726518 6 82 2.0 3.0 2.5 1.7 98 chrX 15726420 exon CG8184 + chrX 15726469 intron CG8184 + chrX 15726518 intron CG8184 + chrX_6_15725001 chrX_15725001 RC1_1-HE 3081 chrX 15848513 15848547 chrX 15848621 15848655 6 108 3.0 1.5 2.2 1.9 142 chrX 15848513 intron sun - chrX 15848584 intron sun - chrX 15848655 intron sun - chrX_6_15845001 chrX_15845001 RC1_1-HE 3082 chrX 15867178 15867209 chrX 15867256 15867286 6 78 3.5 3.5 3.5 1.3 108 chrX 15867178 intergenic not near genes chrX 15867232 intergenic not near genes chrX 15867286 intergenic not near genes chrX_6_15865001 chrX_15865001 RC1_1-HE 3083 chrX 15898438 15898459 chrX 15898593 15898614 7 155 4.0 6.5 5.2 1.1 176 chrX 15898438 intron shi + chrX 15898526 intron shi + chrX 15898614 intron shi + chrX_7_15895001 chrX_15895001 RC1_1-HE 3084 chrX 15939290 15939304 chrX 15939376 15939390 6 84 2.0 2.5 2.2 1.9 100 chrX 15939290 intron Stim - chrX 15939340 intron Stim - chrX 15939390 intron Stim - chrX_6_15935001 chrX_15935001 RC1_1-HE 3085 chrX 15959541 15959568 chrX 15959630 15959657 7 86 2.0 4.5 3.2 1.7 116 chrX 15959541 intron mmd - chrX 15959599 intron mmd - chrX 15959657 intron mmd - chrX_7_15955001 chrX_15955001 RC1_1-HE 3086 chrX 16153450 16153466 chrX 16153531 16153547 14 81 8.0 4.5 6.2 1.9 97 chrX 16153450 intergenic not near genes chrX 16153498 intergenic not near genes chrX 16153547 intergenic not near genes chrX_14_16150001 chrX_16150001 RC1_1-HE 3087 chrX 16221976 16222003 chrX 16222057 16222084 12 80 4.5 2.5 3.5 2.7 108 chrX 16221976 intergenic not near genes chrX 16222030 intergenic not near genes chrX 16222084 intergenic not near genes chrX_12_16220001 chrX_16220001 RC1_1-HE 3088 chrX 16222779 16222797 chrX 16231130 16231148 roo 6 8351 4.0 2.0 3.0 1.5 8369 chrX 16222779 intergenic not near genes chrX 16226964 intergenic not near genes chrX 16231148 intergenic not near genes chrX_6_16225001 chrX_16225001 RC1_1-HE 3089 chrX 16244432 16244447 chrX 16244509 16244524 5 77 4.5 3.5 4.0 1.0 92 chrX 16244432 intergenic not near genes chrX 16244478 intergenic not near genes chrX 16244524 intergenic not near genes chrX_5_16240001 chrX_16240001 RC1_1-HE 3090 chrX 16437606 16437630 chrX 16437694 16437718 9 88 3.5 3.5 3.5 2.0 112 chrX 16437606 3` UTR,3` UTR hang +,CG9947 - chrX 16437662 3` UTR,3` UTR hang +,CG9947 - chrX 16437718 3` UTR,3` UTR hang +,CG9947 - chrX_9_16435001 chrX_16435001 RC1_1-HE 3091 chrX 16492644 16492677 chrX 16498222 16498255 mdg3 13 5578 8.0 7.5 7.8 1.5 5611 chrX 16492644 intron para - chrX 16495450 intron para - chrX 16498255 intron para - chrX_13_16495001 chrX_16495001 RC1_1-HE 3092 chrX 16505864 16505873 chrX 16505947 16505956 6 83 14.0 12.0 13.0 0.4 92 chrX 16505864 intron para - chrX 16505910 intron para - chrX 16505956 intron para - chrX_6_16505001 chrX_16505001 RC1_1-HE 3093 chrX 16689626 16689653 chrX 16689713 16689740 10 85 3.5 1.5 2.5 2.9 114 chrX 16689626 intron Sep4 - chrX 16689683 intron Sep4 - chrX 16689740 intron Sep4 - chrX_10_16685001 chrX_16685001 RC1_1-HE 3094 chrX 16700532 16700557 chrX 16700616 16700640 7 83 0.0 5.5 2.8 1.8 108 chrX 16700532 intron,3` UTR CG4678 +,spheroide - chrX 16700586 intron,3` UTR CG4678 +,spheroide - chrX 16700640 intron,3` UTR CG4678 +,spheroide - chrX_7_16700001 chrX_16700001 RC1_1-HE 3095 chrX 16727167 16727182 chrX 16727245 16727260 5 78 2.5 4.5 3.5 1.1 93 chrX 16727167 intergenic CG9634 -,CG32572 + chrX 16727214 intergenic CG9634 -,CG32572 + chrX 16727260 intergenic CG9634 -,CG32572 + chrX_5_16725001 chrX_16725001 RC1_1-HE 3096 chrX 16762833 16762839 chrX 16762913 16762919 5 80 2.5 2.5 2.5 1.4 86 chrX 16762833 intron if - chrX 16762876 intron if - chrX 16762919 intron if - chrX_5_16760001 chrX_16760001 RC1_1-HE 3097 chrX 16815370 16815388 chrX 16815447 16815465 7 77 2.0 2.0 2.0 2.3 95 chrX 16815370 intron CG4829 + chrX 16815418 intron CG4829 + chrX 16815465 intron CG4829 + chrX_7_16815001 chrX_16815001 RC1_1-HE 3098 chrX 16821126 16821143 chrX 16821204 16821222 7 78 5.0 2.5 3.8 1.5 96 chrX 16821126 intron CG4829 + chrX 16821174 intron CG4829 + chrX 16821222 intron CG4829 + chrX_7_16820001 chrX_16820001 RC1_1-HE 3099 chrX 16870092 16870097 chrX 16870176 16870181 4 84 3.0 4.5 3.8 0.8 89 chrX 16870092 intron CG13003 - chrX 16870136 intron CG13003 - chrX 16870181 intron CG13003 - chrX_4_16870001 chrX_16870001 RC1_1-HE 3100 chrX 16906646 16906680 chrX 16906734 16906768 11 88 0.5 5.0 2.8 2.9 122 chrX 16906646 intron CR44754 - chrX 16906707 intron CR44754 - chrX 16906768 intron CR44754 - chrX_11_16905001 chrX_16905001 RC1_1-HE 3101 chrX 16909002 16909020 chrX 16909084 16909101 7 82 9.0 3.5 6.2 1.0 99 chrX 16909002 intron CR44754 - chrX 16909052 intron CR44754 - chrX 16909101 intron CR44754 - chrX_7_16905001 chrX_16905001 RC1_1-HE 3102 chrX 16944082 16944114 chrX 16944263 16944295 12 181 3.0 2.5 2.8 3.2 213 chrX 16944082 intron RhoGAP15B + chrX 16944188 intron RhoGAP15B + chrX 16944295 intron RhoGAP15B + chrX_12_16940001 chrX_16940001 RC1_1-HE 3103 chrX 17011964 17011990 chrX 17012048 17012074 8 84 4.0 3.5 3.8 1.7 110 chrX 17011964 intron CG45002 - chrX 17012019 intron CG45002 - chrX 17012074 intron CG45002 - chrX_8_17010001 chrX_17010001 RC1_1-HE 3104 chrX 17011991 17012000 chrX 17012047 17012084 7 73 2.5 3.5 3.0 1.8 93 chrX 17011991 intron CG45002 - chrX 17012038 intron CG45002 - chrX 17012084 intron CG45002 - chrX_7_17010001 chrX_17010001 RC1_1-HE 3105 chrX 17045837 17045869 chrX 17045914 17045946 14 75 5.5 3.5 4.5 2.5 109 chrX 17045837 intron CG45002 - chrX 17045892 intron CG45002 - chrX 17045946 intron CG45002 - chrX_14_17045001 chrX_17045001 RC1_1-HE 3106 chrX 17063183 17063208 chrX 17063271 17063296 6 88 1.0 2.0 1.5 2.4 113 chrX 17063183 intron CG45002 - chrX 17063240 intron CG45002 - chrX 17063296 intron CG45002 - chrX_6_17060001 chrX_17060001 RC1_1-HE 3107 chrX 17110305 17110335 chrX 17110428 17110458 5 123 0.0 5.0 2.5 1.4 153 chrX 17110305 intron CG5004 + chrX 17110382 intron CG5004 + chrX 17110458 intron CG5004 + chrX_5_17110001 chrX_17110001 RC1_1-HE 3108 chrX 17111232 17111258 chrX 17111355 17111364 6 120 3.5 1.5 2.5 1.7 132 chrX 17111232 intron CG5004 + chrX 17111298 intron CG5004 + chrX 17111364 intron CG5004 + chrX_6_17110001 chrX_17110001 RC1_1-HE 3109 chrX 17113556 17113568 chrX 17113640 17113652 5 84 0.0 3.5 1.8 1.8 96 chrX 17113556 intron CG5004 + chrX 17113604 intron CG5004 + chrX 17113652 intron CG5004 + chrX_5_17110001 chrX_17110001 RC1_1-HE 3110 chrX 17121534 17121559 chrX 17121618 17121643 7 84 3.0 3.5 3.2 1.7 109 chrX 17121534 intron CG5004 + chrX 17121588 intron CG5004 + chrX 17121643 intron CG5004 + chrX_7_17120001 chrX_17120001 RC1_1-HE 3111 chrX 17195202 17195237 chrX 17200289 17200325 flea 10 5085 3.0 3.0 3.0 2.5 5123 chrX 17195202 3` UTR baz + chrX 17197764 3` UTR baz + chrX 17200325 3` UTR baz + chrX_10_17195001 chrX_17195001 RC1_1-HE 3112 chrX 17229954 17229967 chrX 17230058 17230071 12 104 2.0 4.0 3.0 3.0 117 chrX 17229954 intergenic CG10597 - chrX 17230012 intergenic CG10597 - chrX 17230071 intergenic CG10597 - chrX_12_17230001 chrX_17230001 RC1_1-HE 3113 chrX 17238719 17238756 chrX 17238800 17238837 15 81 4.5 4.5 4.5 2.7 118 chrX 17238719 intron f + chrX 17238778 intron f + chrX 17238837 intron f + chrX_15_17235001 chrX_17235001 RC1_1-HE 3114 chrX 17245350 17245382 chrX 17245436 17245468 9 86 5.0 4.0 4.5 1.6 118 chrX 17245350 intron f + chrX 17245409 intron,3` UTR f +,CG42854 - chrX 17245468 intron,3` UTR f +,CG42854 - chrX_9_17245001 chrX_17245001 RC1_1-HE 3115 chrX 17267283 17267304 chrX 17267364 17267385 13 81 0.0 4.0 2.0 4.3 102 chrX 17267283 intron f + chrX 17267334 intron f + chrX 17267385 intron f + chrX_13_17265001 chrX_17265001 RC1_1-HE 3116 chrX 17275531 17275565 chrX 17275610 17275645 10 78 4.0 6.5 5.2 1.6 114 chrX 17275531 intron f + chrX 17275588 intron f + chrX 17275645 intron f + chrX_10_17275001 chrX_17275001 RC1_1-HE 3117 chrX 17314053 17314086 chrX 17314138 17314171 17 85 3.0 5.5 4.2 3.3 118 chrX 17314053 intergenic not near genes chrX 17314112 intergenic B-H2 + chrX 17314171 intergenic B-H2 + chrX_17_17310001 chrX_17310001 RC1_1-HE 3118 chrX 17405442 17405478 chrX 17405531 17405567 16 89 2.5 2.5 2.5 4.6 125 chrX 17405442 intergenic not near genes chrX 17405504 intergenic not near genes chrX 17405567 intergenic not near genes chrX_16_17405001 chrX_17405001 RC1_1-HE 3119 chrX 17466039 17466066 chrX 17466115 17466143 15 77 3.0 9.5 6.2 2.1 104 chrX 17466039 intron CG43658 - chrX 17466091 intron CG43658 - chrX 17466143 intron CG43658 - chrX_15_17465001 chrX_17465001 RC1_1-HE 3120 chrX 17539681 17539701 chrX 17539760 17539780 17 79 1.5 0.5 1.0 8.5 99 chrX 17539681 intron CG43658 - chrX 17539730 intron CG43658 - chrX 17539780 intron CG43658 - chrX_17_17535001 chrX_17535001 RC1_1-HE 3121 chrX 17556942 17556957 chrX 17557442 17557457 mdg1 6 500 5.0 4.0 4.5 1.1 515 chrX 17556942 intron CG43658 - chrX 17557200 intron CG43658 - chrX 17557457 intron CG43658 - chrX_6_17555001 chrX_17555001 RC1_1-HE 3122 chrX 17574674 17574684 chrX 17574757 17574767 5 83 3.0 4.5 3.8 1.0 93 chrX 17574674 intron l(1)G0222 - chrX 17574720 intron l(1)G0222 - chrX 17574767 intron l(1)G0222 - chrX_5_17570001 chrX_17570001 RC1_1-HE 3123 chrX 17676572 17676578 chrX 17676780 17676786 5 208 2.5 6.0 4.2 1.0 214 chrX 17676572 intron chas - chrX 17676679 intron chas - chrX 17676786 intron chas - chrX_5_17675001 chrX_17675001 RC1_1-HE 3124 chrX 17718162 17718181 chrX 17718284 17718303 9 122 7.0 3.5 5.2 1.5 141 chrX 17718162 intron CG42684 + chrX 17718232 intron CG42684 + chrX 17718303 intron CG42684 + chrX_9_17715001 chrX_17715001 RC1_1-HE 3125 chrX 17782227 17782242 chrX 17782326 17782341 8 99 2.5 5.0 3.8 1.7 114 chrX 17782227 intergenic not near genes chrX 17782284 intergenic not near genes chrX 17782341 intergenic not near genes chrX_8_17780001 chrX_17780001 RC1_1-HE 3126 chrX 17792951 17792983 chrX 17796250 17796277 flea 6 3296 5.5 5.0 5.2 1.0 3326 chrX 17792951 intron OdsH + chrX 17794614 intron OdsH + chrX 17796277 intron OdsH + chrX_6_17790001 chrX_17790001 RC1_1-HE 3127 chrX 17809889 17809907 chrX 17809968 17809986 15 78 9.0 7.0 8.0 1.7 97 chrX 17809889 intron OdsH + chrX 17809938 intron OdsH + chrX 17809986 intron OdsH + chrX_15_17805001 chrX_17805001 RC1_1-HE 3128 chrX 17965711 17965739 chrX 17965789 17965803 23 77 2.0 4.5 3.2 5.5 92 chrX 17965711 intron Sh - chrX 17965757 intron Sh - chrX 17965803 intron Sh - chrX_23_17965001 chrX_17965001 RC1_1-HE 3129 chrX 17968891 17968929 chrX 17969010 17969048 18 119 4.0 5.0 4.5 3.3 157 chrX 17968891 intron Sh - chrX 17968970 intron Sh - chrX 17969048 intron Sh - chrX_18_17965001 chrX_17965001 RC1_1-HE 3130 chrX 17978546 17978550 chrX 17978624 17978629 5 79 9.0 6.0 7.5 0.6 83 chrX 17978546 intron Sh - chrX 17978588 intron Sh - chrX 17978629 intron Sh - chrX_5_17975001 chrX_17975001 RC1_1-HE 3131 chrX 17978553 17978577 chrX 17978620 17978656 15 77 4.5 6.0 5.2 2.4 103 chrX 17978553 intron Sh - chrX 17978604 intron Sh - chrX 17978656 intron Sh - chrX_15_17975001 chrX_17975001 RC1_1-HE 3132 chrX 17985852 17985886 chrX 17985930 17985964 12 78 2.5 4.5 3.5 2.7 112 chrX 17985852 intron Sh - chrX 17985908 intron Sh - chrX 17985964 intron Sh - chrX_12_17985001 chrX_17985001 RC1_1-HE 3133 chrX 18061492 18061525 chrX 18061596 18061629 11 104 1.5 2.0 1.8 3.9 137 chrX 18061492 intron Sh - chrX 18061560 intron Sh - chrX 18061629 intron Sh - chrX_11_18060001 chrX_18060001 RC1_1-HE 3134 chrX 18164036 18164044 chrX 18164122 18164130 5 86 0.5 8.5 4.5 0.9 94 chrX 18164036 intron Frq1 + chrX 18164083 intron Frq1 + chrX 18164130 intron Frq1 + chrX_5_18160001 chrX_18160001 RC1_1-HE 3135 chrX 18175470 18175478 chrX 18175556 18175564 4 86 0.0 5.0 2.5 1.1 94 chrX 18175470 intergenic not near genes chrX 18175517 intergenic not near genes chrX 18175564 intergenic not near genes chrX_4_18175001 chrX_18175001 RC1_1-HE 3136 chrX 18186666 18186683 chrX 18186746 18186763 12 80 4.0 6.0 5.0 2.0 97 chrX 18186666 intron Frq2 + chrX 18186714 intron Frq2 + chrX 18186763 intron Frq2 + chrX_12_18185001 chrX_18185001 RC1_1-HE 3137 chrX 18194064 18194101 chrX 18194600 18194637 BS 28 535 7.0 6.0 6.5 3.7 573 chrX 18194064 intron Frq2 + chrX 18194350 intron Frq2 + chrX 18194637 intron Frq2 + chrX_28_18190001 chrX_18190001 RC1_1-HE 3138 chrX 18195001 18195026 chrX 18195089 18195114 19 88 6.5 11.0 8.8 1.9 113 chrX 18195001 intron Frq2 + chrX 18195058 intron Frq2 + chrX 18195114 intron Frq2 + chrX_19_18195001 chrX_18195001 RC1_1-HE 3139 chrX 18216601 18216631 chrX 18216680 18216710 12 79 1.5 2.5 2.0 4.0 109 chrX 18216601 intron CG33639 - chrX 18216656 intron CG33639 - chrX 18216710 intron CG33639 - chrX_12_18215001 chrX_18215001 RC1_1-HE 3140 chrX 18297554 18297570 chrX 18297634 18297650 13 80 6.5 11.0 8.8 1.3 96 chrX 18297554 intergenic not near genes chrX 18297602 intergenic not near genes chrX 18297650 intergenic not near genes chrX_13_18295001 chrX_18295001 RC1_1-HE 3141 chrX 18320489 18320502 chrX 18320622 18320635 7 133 0.0 2.5 1.2 3.2 146 chrX 18320489 intron CG6023 - chrX 18320562 intron CG6023 - chrX 18320635 intron CG6023 - chrX_7_18320001 chrX_18320001 RC1_1-HE 3142 chrX 18352191 18352222 chrX 18352284 18352315 13 93 2.5 3.5 3.0 3.2 124 chrX 18352191 intron CG6123 - chrX 18352253 intron CG6123 - chrX 18352315 intron CG6123 - chrX_13_18350001 chrX_18350001 RC1_1-HE 3143 chrX 18375405 18375434 chrX 18375493 18375522 20 87 6.5 5.0 5.8 2.9 117 chrX 18375405 intron CrebB + chrX 18375464 intron CrebB + chrX 18375522 intron CrebB + chrX_20_18375001 chrX_18375001 RC1_1-HE 3144 chrX 18429492 18429526 chrX 18434804 18434838 Transpac 17 5312 4.5 4.0 4.2 3.3 5346 chrX 18429492 intergenic not near genes chrX 18432165 intergenic not near genes chrX 18434838 intergenic not near genes chrX_17_18430001 chrX_18430001 RC1_1-HE 3145 chrX 18443027 18443033 chrX 18443105 18443111 6 78 0.5 9.5 5.0 1.0 84 chrX 18443027 3` UTR CG32547 - chrX 18443069 3` UTR CG32547 - chrX 18443111 3` UTR CG32547 - chrX_6_18440001 chrX_18440001 RC1_1-HE 3146 chrX 18524355 18524373 chrX 18524435 18524453 7 80 2.5 2.0 2.2 2.2 98 chrX 18524355 intron Bx + chrX 18524404 intron Bx + chrX 18524453 intron Bx + chrX_7_18520001 chrX_18520001 RC1_1-HE 3147 chrX 18529398 18529419 chrX 18529475 18529496 9 77 3.5 1.0 2.2 2.8 98 chrX 18529398 intron,3` UTR Bx +,CG15047 + chrX 18529447 intron,3` UTR Bx +,CG15047 + chrX 18529496 intron,3` UTR Bx +,CG15047 + chrX_9_18525001 chrX_18525001 RC1_1-HE 3148 chrX 18532014 18532045 chrX 18532097 18532128 15 82 2.5 2.0 2.2 4.7 114 chrX 18532014 intron Bx + chrX 18532071 intron Bx + chrX 18532128 intron Bx + chrX_15_18530001 chrX_18530001 RC1_1-HE 3149 chrX 18555379 18555402 chrX 18556901 18556925 transib2 7 1523 0.5 3.5 2.0 2.3 1546 chrX 18555379 intron Bx + chrX 18556152 intron Bx + chrX 18556925 intron Bx + chrX_7_18555001 chrX_18555001 RC1_1-HE 3150 chrX 18558776 18558807 chrX 18558859 18558890 27 83 1.0 5.0 3.0 6.8 114 chrX 18558776 intron Bx + chrX 18558833 intron Bx + chrX 18558890 intron Bx + chrX_27_18555001 chrX_18555001 RC1_1-HE 3151 chrX 18574792 18574822 chrX 18574873 18574903 10 81 7.5 2.5 5.0 1.7 111 chrX 18574792 intergenic not near genes chrX 18574848 intergenic not near genes chrX 18574903 intergenic not near genes chrX_10_18570001 chrX_18570001 RC1_1-HE 3152 chrX 18645013 18645046 chrX 18645112 18645145 8 99 3.0 2.5 2.8 2.1 132 chrX 18645013 intron Rip11 - chrX 18645079 intron Rip11 - chrX 18645145 intron Rip11 - chrX_8_18645001 chrX_18645001 RC1_1-HE 3153 chrX 18662874 18662900 chrX 18662952 18662978 6 76 1.0 1.5 1.2 2.7 104 chrX 18662874 intergenic not near genes chrX 18662926 intergenic not near genes chrX 18662978 intergenic not near genes chrX_6_18660001 chrX_18660001 RC1_1-HE 3154 chrX 18680754 18680769 chrX 18680867 18680882 14 113 7.0 6.0 6.5 1.9 128 chrX 18680754 intergenic not near genes chrX 18680818 intergenic not near genes chrX 18680882 intergenic not near genes chrX_14_18680001 chrX_18680001 RC1_1-HE 3155 chrX 18698849 18698875 chrX 18698967 18698993 8 118 5.0 6.5 5.8 1.2 144 chrX 18698849 intergenic not near genes chrX 18698921 intergenic not near genes chrX 18698993 intergenic not near genes chrX_8_18695001 chrX_18695001 RC1_1-HE 3156 chrX 18732450 18732478 chrX 18732550 18732579 17 101 8.0 6.5 7.2 2.1 129 chrX 18732450 intergenic CR45513 + chrX 18732514 intergenic CR45513 + chrX 18732579 intergenic CR45513 + chrX_17_18730001 chrX_18730001 RC1_1-HE 3157 chrX 18743541 18743574 chrX 18743633 18743666 13 91 6.0 6.0 6.0 1.9 125 chrX 18743541 intergenic not near genes chrX 18743604 intergenic not near genes chrX 18743666 intergenic not near genes chrX_13_18740001 chrX_18740001 RC1_1-HE 3158 chrX 18818523 18818542 chrX 18818730 18818749 11 207 22.0 15.5 18.8 0.6 226 chrX 18818523 intron CG42450 + chrX 18818636 intron CG42450 + chrX 18818749 intron CG42450 + chrX_11_18815001 chrX_18815001 RC1_1-HE 3159 chrX 18922743 18922769 chrX 18922844 18922870 7 101 0.0 4.5 2.2 2.2 127 chrX 18922743 intergenic not near genes chrX 18922806 intergenic not near genes chrX 18922870 intergenic not near genes chrX_7_18920001 chrX_18920001 RC1_1-HE 3160 chrX 18932985 18933019 chrX 18933068 18933102 20 83 1.5 3.5 2.5 5.7 117 chrX 18932985 intron CG43759 + chrX 18933044 intron CG43759 + chrX 18933102 intron CG43759 + chrX_20_18930001 chrX_18930001 RC1_1-HE 3161 chrX 19014362 19014395 chrX 19014442 19014467 14 79 1.5 3.5 2.5 4.0 105 chrX 19014362 intron CG43759 + chrX 19014414 intron CG43759 + chrX 19014467 intron CG43759 + chrX_14_19010001 chrX_19010001 RC1_1-HE 3162 chrX 19034108 19034137 chrX 19034193 19034213 10 81 2.0 2.5 2.2 3.1 105 chrX 19034108 intergenic not near genes chrX 19034160 intergenic not near genes chrX 19034213 intergenic not near genes chrX_10_19030001 chrX_19030001 RC1_1-HE 3163 chrX 19047119 19047140 chrX 19047196 19047217 4 77 0.0 1.5 0.8 2.2 98 chrX 19047119 intergenic not near genes chrX 19047168 intergenic not near genes chrX 19047217 intergenic not near genes chrX_4_19045001 chrX_19045001 RC1_1-HE 3164 chrX 19060409 19060435 chrX 19065194 19065220 Doc 14 4785 8.5 8.0 8.2 1.5 4811 chrX 19060409 intron CG14190 + chrX 19062814 intron CG14190 + chrX 19065220 intron CG14190 + chrX_14_19060001 chrX_19060001 RC1_1-HE 3165 chrX 19073685 19073695 chrX 19073773 19073783 4 88 8.0 2.0 5.0 0.7 98 chrX 19073685 intergenic not near genes chrX 19073734 intergenic not near genes chrX 19073783 intergenic not near genes chrX_4_19070001 chrX_19070001 RC1_1-HE 3166 chrX 19081265 19081295 chrX 19081454 19081481 14 186 4.0 4.0 4.0 2.8 216 chrX 19081265 intergenic CG14191 + chrX 19081373 intergenic CG14191 + chrX 19081481 intergenic CG14191 + chrX_14_19080001 chrX_19080001 RC1_1-HE 3167 chrX 19084092 19084126 chrX 19084213 19084247 17 121 4.5 5.0 4.8 2.9 155 chrX 19084092 intergenic CR45503 + chrX 19084170 intergenic CR45503 + chrX 19084247 intergenic CR45503 + chrX_17_19080001 chrX_19080001 RC1_1-HE 3168 chrX 19098756 19098783 chrX 19098834 19098862 9 79 5.0 2.0 3.5 2.0 106 chrX 19098756 intergenic not near genes chrX 19098809 intergenic not near genes chrX 19098862 intergenic not near genes chrX_9_19095001 chrX_19095001 RC1_1-HE 3169 chrX 19136556 19136584 chrX 19143476 19143493 412 7 6918 4.0 4.0 4.0 1.4 6937 chrX 19136556 intergenic not near genes chrX 19140024 intergenic not near genes chrX 19143493 3` UTR RhoGAP18B - chrX_7_19140001 chrX_19140001 RC1_1-HE 3170 chrX 19182014 19182037 chrX 19182127 19182150 5 113 2.5 0.5 1.5 2.0 136 chrX 19182014 3` UTR CG7453 + chrX 19182082 intergenic CG7453 + chrX 19182150 intergenic CG7453 + chrX_5_19180001 chrX_19180001 RC1_1-HE 3171 chrX 19275200 19275210 chrX 19275267 19275292 4 76 6.5 1.5 4.0 0.8 92 chrX 19275200 5` UTR,exon CG32537 -,CG32536 - chrX 19275246 5` UTR,exon CG32537 -,CG32536 - chrX 19275292 5` UTR,exon CG32537 -,CG32536 - chrX_4_19275001 chrX_19275001 RC1_1-HE 3172 chrX 19289934 19289944 chrX 19290017 19290027 4 83 0.5 2.5 1.5 1.6 93 chrX 19289934 intron CG8034 - chrX 19289980 intron CG8034 - chrX 19290027 intron CG8034 - chrX_4_19285001 chrX_19285001 RC1_1-HE 3173 chrX 19314857 19314895 chrX 19314935 19314973 13 74 2.0 5.0 3.5 2.9 116 chrX 19314857 intron out - chrX 19314915 intron out - chrX 19314973 intron out - chrX_13_19310001 chrX_19310001 RC1_1-HE 3174 chrX 19343279 19343295 chrX 19343383 19343399 5 104 7.0 0.0 3.5 1.1 120 chrX 19343279 intron nAChRalpha7 - chrX 19343339 intron nAChRalpha7 - chrX 19343399 intron nAChRalpha7 - chrX_5_19340001 chrX_19340001 RC1_1-HE 3175 chrX 19351012 19351025 chrX 19351150 19351163 5 138 2.5 3.0 2.8 1.3 151 chrX 19351012 intergenic not near genes chrX 19351088 intergenic not near genes chrX 19351163 intergenic not near genes chrX_5_19350001 chrX_19350001 RC1_1-HE 3176 chrX 19356987 19357015 chrX 19358429 19358457 NOF 16 1442 3.5 0.5 2.0 5.3 1470 chrX 19356987 intron kek5 + chrX 19357722 intron kek5 + chrX 19358457 intron kek5 + chrX_16_19355001 chrX_19355001 RC1_1-HE 3177 chrX 19380154 19380175 chrX 19380396 19380418 pogo 6 243 6.5 3.0 4.8 1.0 264 chrX 19380154 intron kek5 + chrX 19380286 intron kek5 + chrX 19380418 intron kek5 + chrX_6_19380001 chrX_19380001 RC1_1-HE 3178 chrX 19386257 19386289 chrX 19386336 19386368 11 79 4.0 5.0 4.5 2.0 111 chrX 19386257 intron kek5 + chrX 19386312 intron kek5 + chrX 19386368 intron kek5 + chrX_11_19385001 chrX_19385001 RC1_1-HE 3179 chrX 19428442 19428473 chrX 19428586 19428617 31 143 6.5 5.0 5.8 4.6 175 chrX 19428442 intron kek5 + chrX 19428530 intron kek5 + chrX 19428617 intron kek5 + chrX_31_19425001 chrX_19425001 RC1_1-HE 3180 chrX 19430538 19430558 chrX 19430637 19430657 9 99 6.0 5.0 5.5 1.4 119 chrX 19430538 intron kek5 + chrX 19430598 intron kek5 + chrX 19430657 intron kek5 + chrX_9_19430001 chrX_19430001 RC1_1-HE 3181 chrX 19472122 19472157 chrX 19472693 19472728 jockey 5 566 1.5 3.5 2.5 1.4 606 chrX 19472122 intergenic kek5 + chrX 19472425 intergenic not near genes chrX 19472728 intergenic not near genes chrX_5_19470001 chrX_19470001 RC1_1-HE 3182 chrX 19500575 19500751 chrX 19500653 19500839 17 85 0.0 2.5 1.2 7.7 264 chrX 19500575 intron,intron CG14200 +,Pfrx + chrX 19500707 intron,intron CG14200 +,Pfrx + chrX 19500839 intron,intron CG14200 +,Pfrx + chrX_17_19500001 chrX_19500001 RC1_1-HE 3183 chrX 19542053 19542080 chrX 19542133 19542160 8 80 1.0 4.5 2.8 2.1 107 chrX 19542053 intron CG32532 - chrX 19542106 intron CG32532 - chrX 19542160 intron CG32532 - chrX_8_19540001 chrX_19540001 RC1_1-HE 3184 chrX 19593951 19593977 chrX 19594037 19594063 9 86 4.0 3.5 3.8 1.9 112 chrX 19593951 exon CG14205 + chrX 19594007 intron CG14205 + chrX 19594063 intron CG14205 + chrX_9_19590001 chrX_19590001 RC1_1-HE 3185 chrX 19616798 19616807 chrX 19616876 19616885 4 78 1.5 3.0 2.2 1.2 87 chrX 19616798 3` UTR,3` UTR,3` UTR CG14210 +,CG12788 -,Tim9b - chrX 19616842 3` UTR,3` UTR CG12788 -,Tim9b - chrX 19616885 3` UTR,3` UTR CG12788 -,Tim9b - chrX_4_19615001 chrX_19615001 RC1_1-HE 3186 chrX 19689408 19689437 chrX 19689487 19689489 8 76 2.0 2.0 2.0 2.7 81 chrX 19689408 intergenic Mer -,CG14227 - chrX 19689448 intergenic Mer -,CG14227 - chrX 19689489 intergenic Mer - chrX_8_19685001 chrX_19685001 RC1_1-HE 3187 chrX 19710072 19710101 chrX 19711859 19711888 S-element 12 1787 2.5 5.0 3.8 2.5 1816 chrX 19710072 intron meso18E - chrX 19710980 intron meso18E - chrX 19711888 intron meso18E - chrX_12_19710001 chrX_19710001 RC1_1-HE 3188 chrX 19724163 19724170 chrX 19724245 19724253 6 82 20.5 13.0 16.8 0.3 90 chrX 19724163 intron CG12531 + chrX 19724208 intron CG12531 + chrX 19724253 intron CG12531 + chrX_6_19720001 chrX_19720001 RC1_1-HE 3189 chrX 19762590 19762602 chrX 19762671 19762683 4 81 0.5 2.0 1.2 1.8 93 chrX 19762590 5` UTR CG12702 - chrX 19762636 5` UTR CG12702 - chrX 19762683 5` UTR CG12702 - chrX_4_19760001 chrX_19760001 RC1_1-HE 3190 chrX 19789326 19789341 chrX 19789406 19789421 4 80 1.0 2.5 1.8 1.4 95 chrX 19789326 intergenic not near genes chrX 19789374 intergenic not near genes chrX 19789421 intergenic not near genes chrX_4_19785001 chrX_19785001 RC1_1-HE 3191 chrX 19796605 19796637 chrX 19796683 19796698 12 73 0.0 1.5 0.8 6.7 93 chrX 19796605 intergenic not near genes chrX 19796652 intergenic not near genes chrX 19796698 intergenic not near genes chrX_12_19795001 chrX_19795001 RC1_1-HE 3192 chrX 19812740 19812761 chrX 19816029 19816050 Gypsy12A_LTR 9 3289 37.0 22.5 29.8 0.3 3310 chrX 19812740 5` UTR skpD + chrX 19814395 intergenic not near genes chrX 19816050 intergenic skpC + chrX_9_19810001 chrX_19810001 RC1_1-HE 3193 chrX 19821137 19821165 chrX 19821476 19821504 14 339 0.5 5.5 3.0 3.5 367 chrX 19821137 intergenic not near genes chrX 19821320 intergenic not near genes chrX 19821504 intergenic not near genes chrX_14_19820001 chrX_19820001 RC1_1-HE 3194 chrX 19821730 19821750 chrX 19821816 19821836 6 86 2.5 3.0 2.8 1.6 106 chrX 19821730 intergenic not near genes chrX 19821783 intergenic not near genes chrX 19821836 intergenic not near genes chrX_6_19820001 chrX_19820001 RC1_1-HE 3195 chrX 19822826 19822863 chrX 19822994 19823031 18 168 2.0 3.0 2.5 5.1 205 chrX 19822826 intergenic not near genes chrX 19822928 intergenic skpE - chrX 19823031 intergenic skpE - chrX_18_19820001 chrX_19820001 RC1_1-HE 3196 chrX 19881452 19881484 chrX 19881534 19881566 5 82 2.5 2.0 2.2 1.6 114 chrX 19881452 intron Hers + chrX 19881509 intron Hers + chrX 19881566 intron Hers + chrX_5_19880001 chrX_19880001 RC1_1-HE 3197 chrX 19897381 19897388 chrX 19897459 19897466 8 78 7.5 1.5 4.5 1.5 85 chrX 19897381 intron Hers + chrX 19897424 intron Hers + chrX 19897466 intron Hers + chrX_8_19895001 chrX_19895001 RC1_1-HE 3198 chrX 19897392 19897414 chrX 19897456 19897492 13 77 2.5 1.5 2.0 4.3 100 chrX 19897392 intron Hers + chrX 19897442 intron Hers + chrX 19897492 intron Hers + chrX_13_19895001 chrX_19895001 RC1_1-HE 3199 chrX 19898435 19898452 chrX 19898516 19898533 6 81 0.5 4.0 2.2 1.9 98 chrX 19898435 intron Hers + chrX 19898484 intron Hers + chrX 19898533 intron Hers + chrX_6_19895001 chrX_19895001 RC1_1-HE 3200 chrX 19898727 19898740 chrX 19898852 19898866 5 126 3.5 3.5 3.5 1.1 139 chrX 19898727 intron Hers + chrX 19898796 intron Hers + chrX 19898866 intron Hers + chrX_5_19895001 chrX_19895001 RC1_1-HE 3201 chrX 19989271 19989291 chrX 19989342 19989368 6 76 3.5 2.5 3.0 1.5 97 chrX 19989271 intergenic not near genes chrX 19989320 intergenic not near genes chrX 19989368 intergenic not near genes chrX_6_19985001 chrX_19985001 RC1_1-HE 3202 chrX 19991357 19991389 chrX 19991512 19991545 9 155 5.0 3.0 4.0 1.8 188 chrX 19991357 intergenic not near genes chrX 19991451 intergenic not near genes chrX 19991545 intergenic not near genes chrX_9_19990001 chrX_19990001 RC1_1-HE 3203 chrX 20041533 20041563 chrX 20041614 20041644 4 81 3.0 1.0 2.0 1.3 111 chrX 20041533 intron Dop2R - chrX 20041588 intron Dop2R - chrX 20041644 intron Dop2R - chrX_4_20040001 chrX_20040001 RC1_1-HE 3204 chrX 20073519 20073554 chrX 20073597 20073632 27 77 4.0 5.0 4.5 4.9 113 chrX 20073519 intergenic not near genes chrX 20073576 intergenic not near genes chrX 20073632 intergenic not near genes chrX_27_20070001 chrX_20070001 RC1_1-HE 3205 chrX 20081043 20081195 chrX 20081160 20081285 12 94 0.0 0.0 0.0 12.0 242 chrX 20081043 intergenic not near genes chrX 20081164 intergenic not near genes chrX 20081285 intergenic not near genes chrX_12_20080001 chrX_20080001 RC1_1-HE 3206 chrX 20093105 20093127 chrX 20093245 20093268 5 141 1.0 2.0 1.5 2.0 163 chrX 20093105 intergenic not near genes chrX 20093186 intergenic not near genes chrX 20093268 intergenic not near genes chrX_5_20090001 chrX_20090001 RC1_1-HE 3207 chrX 20127231 20127246 chrX 20127341 20127356 7 110 0.0 5.0 2.5 2.0 125 chrX 20127231 intergenic not near genes chrX 20127294 intergenic not near genes chrX 20127356 intergenic not near genes chrX_7_20125001 chrX_20125001 RC1_1-HE 3208 chrX 20132302 20132307 chrX 20132386 20132391 7 84 13.0 7.5 10.2 0.6 89 chrX 20132302 intergenic not near genes chrX 20132346 intergenic not near genes chrX 20132391 intergenic not near genes chrX_7_20130001 chrX_20130001 RC1_1-HE 3209 chrX 20133134 20133156 chrX 20133217 20133239 12 83 2.5 4.0 3.2 2.9 105 chrX 20133134 intergenic CG15322 + chrX 20133186 intergenic CG15322 + chrX 20133239 intergenic CG15322 + chrX_12_20130001 chrX_20130001 RC1_1-HE 3210 chrX 20137138 20137167 chrX 20137225 20137254 16 87 6.0 2.0 4.0 3.2 116 chrX 20137138 intron CG15322 + chrX 20137196 intron CG15322 + chrX 20137254 intron CG15322 + chrX_16_20135001 chrX_20135001 RC1_1-HE 3211 chrX 20144667 20144697 chrX 20144749 20144779 9 82 5.0 6.5 5.8 1.3 112 chrX 20144667 intergenic not near genes chrX 20144723 intergenic not near genes chrX 20144779 intergenic not near genes chrX_9_20140001 chrX_20140001 RC1_1-HE 3212 chrX 20245903 20245939 chrX 20246016 20246052 6 113 2.5 3.0 2.8 1.6 149 chrX 20245903 intron Peritrophin-A + chrX 20245978 intron Peritrophin-A + chrX 20246052 intron Peritrophin-A + chrX_6_20245001 chrX_20245001 RC1_1-HE 3213 chrX 20269934 20269953 chrX 20270014 20270033 5 80 4.5 3.0 3.8 1.0 99 chrX 20269934 intergenic Inx6 - chrX 20269984 intergenic Inx6 - chrX 20270033 intergenic Inx6 - chrX_5_20265001 chrX_20265001 RC1_1-HE 3214 chrX 20289739 20289768 chrX 20289845 20289877 4 106 1.0 0.0 0.5 2.7 138 chrX 20289739 intergenic not near genes chrX 20289808 intergenic not near genes chrX 20289877 intergenic not near genes chrX_4_20285001 chrX_20285001 RC1_1-HE 3215 chrX 20312880 20312911 chrX 20312959 20312990 13 79 2.0 3.0 2.5 3.7 110 chrX 20312880 intron CG1504 - chrX 20312935 intron CG1504 - chrX 20312990 intron CG1504 - chrX_13_20310001 chrX_20310001 RC1_1-HE 3216 chrX 20314391 20314408 chrX 20314470 20314487 6 79 5.5 3.5 4.5 1.1 96 chrX 20314391 intron CG1504 - chrX 20314439 intron CG1504 - chrX 20314487 intron CG1504 - chrX_6_20310001 chrX_20310001 RC1_1-HE 3217 chrX 20354881 20354916 chrX 20355038 20355044 10 153 1.5 2.0 1.8 3.6 163 chrX 20354881 intergenic not near genes chrX 20354962 intergenic not near genes chrX 20355044 intergenic not near genes chrX_10_20350001 chrX_20350001 RC1_1-HE 3218 chrX 20367308 20367325 chrX 20367389 20367406 6 81 2.0 1.0 1.5 2.4 98 chrX 20367308 intergenic not near genes chrX 20367357 intergenic not near genes chrX 20367406 intergenic not near genes chrX_6_20365001 chrX_20365001 RC1_1-HE 3219 chrX 20377331 20377349 chrX 20378799 20378817 hobo 6 1468 1.0 3.5 2.2 1.9 1486 chrX 20377331 intergenic not near genes chrX 20378074 intergenic not near genes chrX 20378817 intergenic not near genes chrX_6_20375001 chrX_20375001 RC1_1-HE 3220 chrX 20426180 20426202 chrX 20428373 20428395 7 2193 22.5 15.5 19.0 0.3 2215 chrX 20426180 exon cactin + chrX 20427288 intergenic CG11710 -,CG15456 - chrX 20428395 exon CG11710 - chrX_7_20425001 chrX_20425001 RC1_1-HE 3221 chrX 20452812 20452843 chrX 20452889 20452921 15 78 3.0 4.0 3.5 3.3 109 chrX 20452812 intron CG32506 + chrX 20452866 intron CG32506 + chrX 20452921 intron CG32506 + chrX_15_20450001 chrX_20450001 RC1_1-HE 3222 chrX 20493704 20493722 chrX 20493797 20493816 4 94 4.5 0.0 2.2 1.2 112 chrX 20493704 intron RhoGAP19D - chrX 20493760 intron RhoGAP19D - chrX 20493816 intron RhoGAP19D - chrX_4_20490001 chrX_20490001 RC1_1-HE 3223 chrX 20504136 20504154 chrX 20505658 20505676 transib2 6 1522 4.5 5.0 4.8 1.0 1540 chrX 20504136 intron RhoGAP19D - chrX 20504906 intron RhoGAP19D - chrX 20505676 intron RhoGAP19D - chrX_6_20500001 chrX_20500001 RC1_1-HE 3224 chrX 20517252 20517280 chrX 20517338 20517366 11 86 4.5 1.0 2.8 2.9 114 chrX 20517252 intron Tak1 - chrX 20517309 intron Tak1 - chrX 20517366 intron Tak1 - chrX_11_20515001 chrX_20515001 RC1_1-HE 3225 chrX 20526681 20526709 chrX 20526765 20526793 11 84 2.0 0.5 1.2 5.0 112 chrX 20526681 intergenic not near genes chrX 20526737 intergenic not near genes chrX 20526793 intergenic not near genes chrX_11_20525001 chrX_20525001 RC1_1-HE 3226 chrX 20541327 20541339 chrX 20541451 20541463 7 124 0.0 1.0 0.5 4.7 136 chrX 20541327 intron RunxB + chrX 20541395 intron RunxB + chrX 20541463 intron RunxB + chrX_7_20540001 chrX_20540001 RC1_1-HE 3227 chrX 20558442 20558474 chrX 20558522 20558554 12 80 1.5 0.5 1.0 6.0 112 chrX 20558442 intron RunxB + chrX 20558498 intron RunxB + chrX 20558554 intron RunxB + chrX_12_20555001 chrX_20555001 RC1_1-HE 3228 chrX 20665781 20665787 chrX 20665859 20665865 5 78 4.0 0.0 2.0 1.7 84 chrX 20665781 intron CG1835 + chrX 20665823 intron CG1835 + chrX 20665865 intron CG1835 + chrX_5_20665001 chrX_20665001 RC1_1-HE 3229 chrX 20665788 20665798 chrX 20665856 20665876 4 76 3.0 0.0 1.5 1.6 88 chrX 20665788 intron CG1835 + chrX 20665832 intron CG1835 + chrX 20665876 intron CG1835 + chrX_4_20665001 chrX_20665001 RC1_1-HE 3230 chrX 20722536 20722552 chrX 20722680 20722696 6 144 7.5 0.0 3.8 1.2 160 chrX 20722536 intergenic not near genes chrX 20722616 intergenic not near genes chrX 20722696 intergenic not near genes chrX_6_20720001 chrX_20720001 RC1_1-HE 3231 chrX 20742658 20742676 chrX 20742937 20742955 5 279 1.5 10.0 5.8 0.7 297 chrX 20742658 intergenic not near genes chrX 20742806 intergenic not near genes chrX 20742955 intergenic not near genes chrX_5_20740001 chrX_20740001 RC1_1-HE 3232 chrX 20780228 20780238 chrX 20780454 20780456 6 225 4.5 7.5 6.0 0.9 228 chrX 20780228 intron,3` UTR shakB -,CG32507 - chrX 20780342 intron,3` UTR shakB -,CG32507 - chrX 20780456 intron,3` UTR shakB -,CG32507 - chrX_6_20780001 chrX_20780001 RC1_1-HE 3233 chrX 20810720 20810732 chrX 20810799 20810811 9 79 7.0 4.5 5.8 1.3 91 chrX 20810720 intron shakB - chrX 20810766 intron shakB - chrX 20810811 intron shakB - chrX_9_20810001 chrX_20810001 RC1_1-HE 3234 chrX 20836725 20836750 chrX 20844328 20844353 roo 16 7603 1.5 3.0 2.2 5.0 7628 chrX 20836725 intron shakB - chrX 20840539 intron shakB - chrX 20844353 intron shakB - chrX_16_20840001 chrX_20840001 RC1_1-HE 3235 chrX 20875840 20875877 chrX 20875923 20875960 14 83 0.0 3.0 1.5 5.6 120 chrX 20875840 intron shakB - chrX 20875900 intron shakB - chrX 20875960 intron shakB - chrX_14_20875001 chrX_20875001 RC1_1-HE 3236 chrX 20909555 20909592 chrX 20909642 20909679 16 87 4.5 3.0 3.8 3.3 124 chrX 20909555 intron shakB - chrX 20909617 intron shakB - chrX 20909679 intron shakB - chrX_16_20905001 chrX_20905001 RC1_1-HE 3237 chrX 20940716 20940752 chrX 20942186 20942222 hobo 14 1470 2.5 3.0 2.8 3.7 1506 chrX 20940716 intergenic not near genes chrX 20941469 intergenic not near genes chrX 20942222 intergenic not near genes chrX_14_20940001 chrX_20940001 RC1_1-HE 3238 chrX 20956846 20956851 chrX 20956950 20956955 5 104 2.0 4.5 3.2 1.2 109 chrX 20956846 intergenic not near genes chrX 20956900 intergenic not near genes chrX 20956955 intergenic not near genes chrX_5_20955001 chrX_20955001 RC1_1-HE 3239 chrX 20956991 20957009 chrX 20962434 20962452 I-element 7 5443 6.0 5.0 5.5 1.1 5461 chrX 20956991 intergenic not near genes chrX 20959722 intergenic not near genes chrX 20962452 intergenic Ser6 - chrX_7_20955001 chrX_20955001 RC1_1-HE 3240 chrX 20997099 20997112 chrX 20997171 20997199 4 82 4.5 4.0 4.2 0.8 100 chrX 20997099 intergenic not near genes chrX 20997149 intergenic not near genes chrX 20997199 intergenic not near genes chrX_4_20995001 chrX_20995001 RC1_1-HE 3241 chrX 21004303 21004326 chrX 21004380 21004403 10 77 4.0 3.5 3.8 2.1 100 chrX 21004303 intergenic not near genes chrX 21004353 intergenic not near genes chrX 21004403 intergenic not near genes chrX_10_21000001 chrX_21000001 RC1_1-HE 3242 chrX 21008662 21008689 chrX 21008750 21008777 15 88 2.5 4.5 3.5 3.3 115 chrX 21008662 intergenic not near genes chrX 21008720 intergenic not near genes chrX 21008777 intergenic not near genes chrX_15_21005001 chrX_21005001 RC1_1-HE 3243 chrX 21016357 21016367 chrX 21016447 21016457 5 90 8.5 8.0 8.2 0.5 100 chrX 21016357 intergenic not near genes chrX 21016407 intergenic not near genes chrX 21016457 intergenic not near genes chrX_5_21015001 chrX_21015001 RC1_1-HE 3244 chrX 21022231 21022343 chrX 21022401 21022513 15 170 1.5 0.0 0.8 8.3 282 chrX 21022231 intergenic not near genes chrX 21022372 intergenic not near genes chrX 21022513 intergenic not near genes chrX_15_21020001 chrX_21020001 RC1_1-HE 3245 chrX 21061869 21061878 chrX 21062355 21062364 roo 6 486 5.5 2.0 3.8 1.2 495 chrX 21061869 intron bves + chrX 21062116 intron bves + chrX 21062364 intron,3` UTR bves +,CG32512 - chrX_6_21060001 chrX_21060001 RC1_1-HE 3246 chrX 21086127 21086161 chrX 21087157 21087191 jockey 21 1030 4.5 6.5 5.5 3.2 1064 chrX 21086127 intergenic not near genes chrX 21086659 intergenic not near genes chrX 21087191 intergenic not near genes chrX_21_21085001 chrX_21085001 RC1_1-HE 3247 chrX 21166141 21166367 chrX 21166220 21166454 6 85 2.5 1.5 2.0 2.0 313 chrX 21166141 intergenic not near genes chrX 21166298 intergenic not near genes chrX 21166454 intergenic not near genes chrX_6_21165001 chrX_21165001 RC1_1-HE 3248 chrX 21189580 21189601 chrX 21189968 21189989 7 387 1.0 3.5 2.2 2.2 409 chrX 21189580 intergenic not near genes chrX 21189784 intergenic not near genes chrX 21189989 intergenic not near genes chrX_7_21185001 chrX_21185001 RC1_1-HE 3249 chrX 21212668 21212690 chrX 21212749 21212771 5 81 7.0 2.5 4.8 0.9 103 chrX 21212668 intron CG32521 - chrX 21212720 intron CG32521 - chrX 21212771 intron CG32521 - chrX_5_21210001 chrX_21210001 RC1_1-HE 3250 chrX 21253286 21253308 chrX 21253364 21253386 12 78 8.5 4.5 6.5 1.6 100 chrX 21253286 intron CG32521 - chrX 21253336 intron CG32521 - chrX 21253386 intron CG32521 - chrX_12_21250001 chrX_21250001 RC1_1-HE 3251 chrX 21328125 21328146 chrX 21328237 21328258 7 112 2.0 3.5 2.8 1.8 133 chrX 21328125 3` UTR CG1486 + chrX 21328192 intergenic CG1486 +,tty - chrX 21328258 intergenic CG1486 +,tty - chrX_7_21325001 chrX_21325001 RC1_1-HE 3252 chrX 21345115 21345146 chrX 21345197 21345228 26 82 3.0 3.5 3.2 6.2 113 chrX 21345115 intergenic fliI +,dod + chrX 21345172 intergenic fliI +,dod + chrX 21345228 intergenic dod +,fliI + chrX_26_21345001 chrX_21345001 RC1_1-HE 3253 chrX 21358074 21358095 chrX 21358155 21358176 5 81 5.0 2.5 3.8 1.0 102 chrX 21358074 intergenic sol +,Sep1 + chrX 21358125 intergenic Sep1 +,sol + chrX 21358176 intergenic Sep1 +,sol + chrX_5_21355001 chrX_21355001 RC1_1-HE 3254 chrX 21410641 21410671 chrX 21410721 21410751 13 80 0.0 0.5 0.2 10.8 110 chrX 21410641 intergenic CR45003 - chrX 21410696 intergenic CR45003 - chrX 21410751 intergenic CR45003 - chrX_13_21410001 chrX_21410001 RC1_1-HE 3255 chrX 21412848 21412867 chrX 21412946 21412965 9 98 0.0 0.0 0.0 9.0 117 chrX 21412848 intergenic not near genes chrX 21412906 intergenic not near genes chrX 21412965 intergenic not near genes chrX_9_21410001 chrX_21410001 RC1_1-HE 3256 chrX 21419700 21419733 chrX 21419790 21419823 4 90 2.0 1.0 1.5 1.6 123 chrX 21419700 intergenic not near genes chrX 21419762 intergenic not near genes chrX 21419823 intergenic not near genes chrX_4_21415001 chrX_21415001 RC1_1-HE 3257 chrX 21447203 21447233 chrX 21447752 21447782 4 549 4.0 20.0 12.0 0.3 579 chrX 21447203 intron CG42343 - chrX 21447492 intron CG42343 - chrX 21447782 intron CG42343 - chrX_4_21445001 chrX_21445001 RC1_1-HE 3258 chrX 21449253 21449260 chrX 21449341 21449348 4 88 6.0 8.0 7.0 0.5 95 chrX 21449253 intron CG42343 - chrX 21449300 intron CG42343 - chrX 21449348 intron CG42343 - chrX_4_21445001 chrX_21445001 RC1_1-HE 3259 chrX 21458697 21458729 chrX 21464134 21464166 Ivk 10 5436 1.0 3.5 2.2 3.1 5469 chrX 21458697 intergenic not near genes chrX 21461432 intergenic not near genes chrX 21464166 intergenic not near genes chrX_10_21460001 chrX_21460001 RC1_1-HE 3260 chrX 21467019 21467032 chrX 21467104 21467111 5 84 5.5 3.0 4.2 1.0 92 chrX 21467019 intergenic CR45507 - chrX 21467065 intergenic CR45507 - chrX 21467111 intergenic CR45507 - chrX_5_21465001 chrX_21465001 RC1_1-HE 3261 chrX 21492280 21492294 chrX 21492394 21492408 10 114 0.0 5.0 2.5 2.9 128 chrX 21492280 intergenic not near genes chrX 21492344 intergenic not near genes chrX 21492408 intergenic not near genes chrX_10_21490001 chrX_21490001 RC1_1-HE 3262 chrX 21565411 21565442 chrX 21565490 21565521 11 78 3.0 3.5 3.2 2.6 110 chrX 21565411 intergenic not near genes chrX 21565466 intergenic not near genes chrX 21565521 intergenic not near genes chrX_11_21565001 chrX_21565001 RC1_1-HE 3263 chrX 21567955 21567964 chrX 21568037 21568046 5 82 23.5 2.5 13.0 0.4 91 chrX 21567955 intergenic not near genes chrX 21568000 intergenic not near genes chrX 21568046 intergenic not near genes chrX_5_21565001 chrX_21565001 RC1_1-HE 3264 chrX 21631068 21631098 chrX 21631145 21631175 11 77 1.0 1.0 1.0 5.5 107 chrX 21631068 intron CR44712 + chrX 21631122 intron CR44712 + chrX 21631175 5` UTR CR44712 + chrX_11_21630001 chrX_21630001 RC1_1-HE 3265 chrX 21668255 21668290 chrX 21668341 21668376 18 85 12.5 11.5 12.0 1.4 121 chrX 21668255 intergenic not near genes chrX 21668316 intergenic not near genes chrX 21668376 intergenic not near genes chrX_18_21665001 chrX_21665001 RC1_1-HE 3266 chrX 22478616 22478644 chrX 22478693 22478721 9 77 3.0 2.5 2.8 2.4 105 chrX 22478616 intron CG12576 - chrX 22478668 intron CG12576 - chrX 22478721 intron CG12576 - chrX_9_22475001 chrX_22475001 RC1_1-HE 3267 chrX 22504541 22504713 chrX 22504620 22504811 4 88 1.0 0.0 0.5 2.7 270 chrX 22504541 intron l(1)G0196 + chrX 22504676 intron l(1)G0196 + chrX 22504811 intron l(1)G0196 + chrX_4_22500001 chrX_22500001 RC1_1-HE 3268 chrX 22536288 22536321 chrX 22536370 22536403 4 75 1.0 5.0 3.0 1.0 115 chrX 22536288 intron,3` UTR,3` UTR CG17600 +,S6kII +,CG17598 - chrX 22536346 intron,3` UTR,3` UTR CG17600 +,S6kII +,CG17598 - chrX 22536403 intron,3` UTR CG17600 +,CG17598 - chrX_4_22535001 chrX_22535001 RC1_1-HE 3269 chrX 22600246 22600252 chrX 22600396 22600402 4 150 2.0 0.0 1.0 2.0 156 chrX 22600246 intron Cda4 - chrX 22600324 intron Cda4 - chrX 22600402 intron Cda4 - chrX_4_22600001 chrX_22600001 RC1_1-HE 3270 chrX 22638631 22638637 chrX 22639420 22639426 5 789 1.0 2.0 1.5 2.0 795 chrX 22638631 intergenic not near genes chrX 22639028 intergenic not near genes chrX 22639426 intergenic not near genes chrX_5_22635001 chrX_22635001 RC1_1-HE 3271 chrX 22660567 22660590 chrX 22660652 22660675 15 85 9.0 0.0 4.5 2.7 108 chrX 22660567 intron CR44997 + chrX 22660621 intron CR44997 + chrX 22660675 intron CR44997 + chrX_15_22660001 chrX_22660001 RC1_1-HE 3272 chrX 22697493 22697519 chrX 22701791 22701817 Juan 17 4298 6.5 8.5 7.5 2.0 4324 chrX 22697493 intron CR44997 + chrX 22699655 intron CR44997 + chrX 22701817 intron CR44997 + chrX_17_22695001 chrX_22695001 RC1_1-HE 3273 chrX 22771505 22771539 chrX 22774797 22774831 297 9 3292 2.0 4.0 3.0 2.2 3326 chrX 22771505 intron CR44997 + chrX 22773168 intron CR44997 + chrX 22774831 intron CR44997 + chrX_9_22770001 chrX_22770001 RC1_1-HE 3274 chrX 22784076 22784102 chrX 22784160 22784186 6 84 4.5 1.5 3.0 1.5 110 chrX 22784076 intron CR44997 + chrX 22784131 intron CR44997 + chrX 22784186 intron CR44997 + chrX_6_22780001 chrX_22780001 RC1_1-HE 3275 chrX 22811994 22812002 chrX 22816768 22816776 F-element 6 4774 14.5 6.0 10.2 0.5 4782 chrX 22811994 intergenic CG12446 - chrX 22814385 intergenic not near genes chrX 22816776 intergenic not near genes chrX_6_22810001 chrX_22810001 RC1_1-HE 3276 chrX 22824418 22824450 chrX 22824552 22824584 10 134 5.0 8.5 6.8 1.3 166 chrX 22824418 3` UTR fog - chrX 22824501 3` UTR fog - chrX 22824584 3` UTR fog - chrX_10_22820001 chrX_22820001 RC1_1-HE 3277 chrX 22862952 22862988 chrX 22863049 22863083 15 93 6.5 4.0 5.2 2.4 131 chrX 22862952 intron CG42346 + chrX 22863018 intron CG42346 + chrX 22863083 intron CG42346 + chrX_15_22860001 chrX_22860001 RC1_1-HE 3278 chrX 22920979 22920992 chrX 22921096 22921109 6 117 0.0 5.5 2.8 1.6 130 chrX 22920979 intergenic not near genes chrX 22921044 intergenic not near genes chrX 22921109 intergenic not near genes chrX_6_22920001 chrX_22920001 RC1_1-HE 3279 chrX 22922524 22922545 chrX 22922603 22922625 8 81 2.0 6.5 4.2 1.5 101 chrX 22922524 intergenic not near genes chrX 22922574 intergenic not near genes chrX 22922625 intergenic not near genes chrX_8_22920001 chrX_22920001 RC1_1-HE 3280 chrX 22987109 22987136 chrX 22989769 22989779 Burdock 7 2658 2.0 2.0 2.0 2.3 2670 chrX 22987109 intron,intron stnA -,stnB - chrX 22988444 intron,intron stnA -,stnB - chrX 22989779 intron,intron stnA -,stnB - chrX_7_22985001 chrX_22985001 RC1_1-HE 3281 chrX 22992392 22992416 chrX 22992524 22992548 7 132 4.0 0.5 2.2 2.2 156 chrX 22992392 intron,intron stnA -,stnB - chrX 22992470 intron,intron stnA -,stnB - chrX 22992548 intron,intron stnA -,stnB - chrX_7_22990001 chrX_22990001 RC1_1-HE 3282 chrX 22996312 22996329 chrX 23003546 23003563 roo 9 7233 3.5 4.0 3.8 1.9 7251 chrX 22996312 intron,intron stnA -,stnB - chrX 22999938 intron,intron stnA -,stnB - chrX 23003563 intron,intron stnA -,stnB - chrX_9_22995001 chrX_22995001 RC1_1-HE 3283 chrY 311341 311343 chrY 311459 311461 4 118 0.0 0.0 0.0 4.0 120 chrY 311341 intergenic not near genes chrY 311401 intergenic not near genes chrY 311461 intergenic not near genes chrY_4_310001 chrY_310001 RC1_1-HE