SV# Chr Chr_coord_5p Chr_coord_3p TE TE_coord_start TE_coord_end Reads_collapsed Chr_Coord_Dist Symmetry avg_blat_score Norm_RefGen_Reads Coverage_Ratio classification comments insert_code loci_code Sym_score libname 1 chr2L 138256 138286 F-element 42 12 9 30 '5-4 62.21 3.4 2.0 intron CG11455 + chr2L_9_135001 chr2L_135001 0.56 KT6_1-HE 2 chr2L 384023 384093 transib2 2822 10 16 70 '9-7 61.66 5.3 2.5 intron al + chr2L_16_380001 chr2L_380001 0.56 KT6_1-HE 3 chr2L 568156 568471 I-element 5342 187 9 315 '8-1 69.44 3.2 2.1 intergenic Nle -,CG2807 + chr2L_9_565001 chr2L_565001 0.89 KT6_1-HE 4 chr2L 607040 607117 Stalker2 7246 395 48 77 '39-9 61.80 9.2 4.7 intergenic not near genes chr2L_48_605001 chr2L_605001 0.81 KT6_1-HE 5 chr2L 1351643 1351703 I-element 1 5341 20 60 '13-7 60.84 11.7 1.6 intergenic CG5556 - chr2L_20_1350001 chr2L_1350001 0.65 KT6_1-HE 6 chr2L 1813319 1813371 flea 4770 4996 9 52 '5-4 66.37 2.2 2.8 intergenic not near genes chr2L_9_1810001 chr2L_1810001 0.56 KT6_1-HE 7 chr2L 2390065 2390358 F-element 193 41 9 293 '1-8 58.28 6.0 1.3 exon CG43750 - chr2L_9_2390001 chr2L_2390001 0.11 KT6_1-HE 8 chr2L 2484352 2484406 BS 5075 6 6 54 '3-3 63.60 0.6 3.8 intergenic not near genes chr2L_6_2480001 chr2L_2480001 0.50 KT6_1-HE 9 chr2L 4434381 4434465 springer 383 7136 16 84 '9-7 63.52 4.8 2.8 intron,exon,5` UTR CG15431 -,CG34177 +,CG34178 + chr2L_16_4430001 chr2L_4430001 0.56 KT6_1-HE 10 chr2L 4886866 4886899 invader4 327 3053 13 33 '6-7 65.02 14.5 0.8 intergenic not near genes chr2L_13_4885001 chr2L_4885001 0.46 KT6_1-HE 11 chr2L 4917800 4917850 I-element 5349 4874 6 50 '2-4 63.38 2.3 1.8 intron hoe1 - chr2L_6_4915001 chr2L_4915001 0.33 KT6_1-HE 12 chr2L 5004084 5004162 hopper 2 1413 11 78 '4-7 64.92 1.5 4.4 intron Rtnl1 - chr2L_11_5000001 chr2L_5000001 0.36 KT6_1-HE 13 chr2L 5603784 5603851 hobo 3 2709 16 67 '8-8 65.62 7.3 1.9 intron CG14010 - chr2L_16_5600001 chr2L_5600001 0.50 KT6_1-HE 14 chr2L 5611950 5612031 hobo 1 2709 15 81 '12-3 68.72 6.1 2.1 intron CG14010 - chr2L_15_5610001 chr2L_5610001 0.80 KT6_1-HE 15 chr2L 5614945 5614969 jockey 35 11 12 24 '7-5 69.81 8.9 1.2 intron CG14010 - chr2L_12_5610001 chr2L_5610001 0.58 KT6_1-HE 16 chr2L 5619219 5619298 hobo 2708 2 14 79 '4-10 63.49 5.0 2.3 intergenic not near genes chr2L_14_5615001 chr2L_5615001 0.29 KT6_1-HE 17 chr2L 5642833 5642888 jockey 4981 4 41 55 '10-31 61.64 11.5 3.3 intron CG31646 - chr2L_41_5640001 chr2L_5640001 0.24 KT6_1-HE 18 chr2L 5806536 5806602 1360 3378 3386 11 66 '2-9 65.07 2.2 3.4 intron CG11034 + chr2L_11_5805001 chr2L_5805001 0.18 KT6_1-HE 19 chr2L 5876645 5876729 mdg3 5497 5249 36 84 '18-18 68.76 8.3 3.9 intron rau - chr2L_36_5875001 chr2L_5875001 0.50 KT6_1-HE 20 chr2L 5952424 5952450 pogo 2073 2099 6 26 '2-4 62.80 1.5 2.4 intron CG9044 + chr2L_6_5950001 chr2L_5950001 0.33 KT6_1-HE 21 chr2L 6149091 6149169 accord 180 7026 4 78 '1-3 78.01 8.8 0.4 intergenic not near genes chr2L_4_6145001 chr2L_6145001 0.25 KT6_1-HE 22 chr2L 6171355 6171420 Juan 4200 4073 13 65 '5-8 64.85 6.1 1.8 intergenic not near genes chr2L_13_6170001 chr2L_6170001 0.38 KT6_1-HE 23 chr2L 6386237 6386351 Doc 465 38 21 114 '1-20 56.32 10.8 1.8 exon CG42368 - chr2L_21_6385001 chr2L_6385001 0.05 KT6_1-HE 24 chr2L 6527026 6527057 jockey 4710 4700 14 31 '6-8 62.56 4.2 2.7 intergenic CG31637 +,eya - chr2L_14_6525001 chr2L_6525001 0.43 KT6_1-HE 25 chr2L 6570553 6570636 pogo 2 2100 13 83 '10-3 66.36 4.1 2.5 3` UTR CG11319 - chr2L_13_6570001 chr2L_6570001 0.77 KT6_1-HE 26 chr2L 7419116 7419185 hopper 11 1412 19 69 '4-15 62.12 2.9 4.9 intron chm + chr2L_19_7415001 chr2L_7415001 0.21 KT6_1-HE 27 chr2L 7502055 7502136 pogo 3 2099 23 81 '11-12 67.03 6.5 3.1 intron RapGAP1 - chr2L_23_7500001 chr2L_7500001 0.48 KT6_1-HE 28 chr2L 7643117 7643195 P-element 1 2886 22 78 '11-11 51.76 12.3 1.7 3` UTR Slob - chr2L_22_7640001 chr2L_7640001 0.50 KT6_1-HE 29 chr2L 7942051 7942123 Burdock 6140 6383 22 72 '13-9 64.77 0.0 22.0 intron Snoo - chr2L_22_7940001 chr2L_7940001 0.59 KT6_1-HE 30 chr2L 7992421 7992479 I-element 3 5345 21 58 '14-7 64.13 6.3 2.9 intron pes - chr2L_21_7990001 chr2L_7990001 0.67 KT6_1-HE 31 chr2L 8231955 8232120 mariner2 780 781 4 165 '3-1 47.37 1.9 1.4 intron Pvr - chr2L_4_8230001 chr2L_8230001 0.75 KT6_1-HE 32 chr2L 8421351 8421382 P-element 32 2886 13 31 '7-6 47.45 6.7 1.7 intron Akap200 + chr2L_13_8420001 chr2L_8420001 0.54 KT6_1-HE 33 chr2L 8451591 8451651 FB 9 8 4 60 '2-2 57.88 1.3 1.7 5` UTR fu12 - chr2L_4_8450001 chr2L_8450001 0.50 KT6_1-HE 34 chr2L 8485682 8485740 I-element 10 5350 9 58 '6-3 60.46 1.1 4.3 intron d + chr2L_9_8485001 chr2L_8485001 0.67 KT6_1-HE 35 chr2L 8541968 8542033 pogo 4 2099 10 65 '4-6 53.81 0.0 10.0 intergenic Sema-1a + chr2L_10_8540001 chr2L_8540001 0.40 KT6_1-HE 36 chr2L 8639549 8639632 Burdock 256 6138 9 83 '3-6 65.35 6.7 1.2 intron Sema-1a + chr2L_9_8635001 chr2L_8635001 0.33 KT6_1-HE 37 chr2L 8659311 8659391 pogo 1 2096 29 80 '17-12 66.99 7.7 3.3 intron Sema-1a + chr2L_29_8655001 chr2L_8655001 0.59 KT6_1-HE 38 chr2L 9356824 9356901 Stalker4 402 6956 10 77 '5-5 64.34 5.4 1.6 intergenic not near genes chr2L_10_9355001 chr2L_9355001 0.50 KT6_1-HE 39 chr2L 9689664 9689741 pogo 6 2100 11 77 '5-6 62.80 3.6 2.4 intron Pka-C1 - chr2L_11_9685001 chr2L_9685001 0.45 KT6_1-HE 40 chr2L 9707168 9707236 Tirant 8492 4 12 68 '3-9 63.02 2.3 3.6 intron pelo + chr2L_12_9705001 chr2L_9705001 0.25 KT6_1-HE 41 chr2L 9871739 9871762 hobo 2911 2934 5 23 '1-4 59.10 2.9 1.3 intron nAChRalpha6 - chr2L_5_9870001 chr2L_9870001 0.20 KT6_1-HE 42 chr2L 9943886 9943968 mdg3 5255 248 15 82 '7-8 62.69 3.1 3.7 intron CG5853 - chr2L_15_9940001 chr2L_9940001 0.47 KT6_1-HE 43 chr2L 10306829 10306890 P-element 2883 15 11 61 '5-6 48.50 2.7 3.0 intergenic CG4968 +,CG5390 - chr2L_11_10305001 chr2L_10305001 0.45 KT6_1-HE 44 chr2L 10331192 10331264 copia 4869 245 5 72 '3-2 65.79 2.1 1.6 intergenic CG5375 -,CG5037 + chr2L_5_10330001 chr2L_10330001 0.60 KT6_1-HE 45 chr2L 10720803 10721135 Doc 34 479 12 332 '11-1 70.81 5.4 1.9 intergenic not near genes chr2L_12_10720001 chr2L_10720001 0.92 KT6_1-HE 46 chr2L 11061476 11061559 HMS-Beagle 246 6797 22 83 '13-9 64.78 6.8 2.8 intron Samuel - chr2L_22_11060001 chr2L_11060001 0.59 KT6_1-HE 47 chr2L 11077954 11077975 jockey 242 263 14 21 '7-7 57.05 15.0 0.9 intron AstC - chr2L_14_11075001 chr2L_11075001 0.50 KT6_1-HE 48 chr2L 11318829 11318905 Quasimodo 7362 3 4 76 '3-1 68.96 6.7 0.5 intergenic CR44583 + chr2L_4_11315001 chr2L_11315001 0.75 KT6_1-HE 49 chr2L 11577661 11577731 roo 14 410 22 70 '4-18 66.55 6.1 3.1 intergenic not near genes chr2L_22_11575001 chr2L_11575001 0.18 KT6_1-HE 50 chr2L 11654860 11654875 opus 484 499 10 15 '4-6 58.95 6.3 1.4 intergenic not near genes chr2L_10_11650001 chr2L_11650001 0.40 KT6_1-HE 51 chr2L 11867313 11867425 jockey 56 4805 18 112 '17-1 61.45 7.3 2.2 intron Pde1c - chr2L_18_11865001 chr2L_11865001 0.94 KT6_1-HE 52 chr2L 11942563 11942584 jockey 4960 4981 13 21 '8-5 60.73 7.8 1.5 intergenic not near genes chr2L_13_11940001 chr2L_11940001 0.62 KT6_1-HE 53 chr2L 12187675 12187756 pogo 3 2099 31 81 '14-17 65.39 7.9 3.5 intron aret + chr2L_31_12185001 chr2L_12185001 0.45 KT6_1-HE 54 chr2L 12765744 12765829 412 496 1 36 85 '22-14 67.44 8.8 3.7 intergenic not near genes chr2L_36_12765001 chr2L_12765001 0.61 KT6_1-HE 55 chr2L 12769991 12770020 opus 498 487 22 29 '15-7 63.10 16.7 1.2 intergenic not near genes chr2L_22_12765001 chr2L_12765001 0.68 KT6_1-HE 56 chr2L 12979018 12979068 hobo 2922 8 9 50 '3-6 68.17 5.3 1.4 exon Vha68-3 + chr2L_9_12975001 chr2L_12975001 0.33 KT6_1-HE 57 chr2L 13436834 13436912 hobo 4 2709 13 78 '7-6 69.58 7.9 1.5 intron,intron CG42784 +,Tehao + chr2L_13_13435001 chr2L_13435001 0.54 KT6_1-HE 58 chr2L 13534781 13534822 hobo 2709 21 5 41 '4-1 62.88 2.3 1.5 intron B4 - chr2L_5_13530001 chr2L_13530001 0.80 KT6_1-HE 59 chr2L 13884127 13884209 roo 407 8663 18 82 '14-4 69.28 5.1 3.0 intron CenG1A + chr2L_18_13880001 chr2L_13880001 0.78 KT6_1-HE 60 chr2L 14996547 14996608 opus 21 7499 17 61 '4-13 64.73 2.3 5.2 intron mol - chr2L_17_14995001 chr2L_14995001 0.24 KT6_1-HE 61 chr2L 15152149 15152234 opus 499 113 35 85 '27-8 67.55 12.4 2.6 intergenic not near genes chr2L_35_15150001 chr2L_15150001 0.77 KT6_1-HE 62 chr2L 15275390 15275416 Doc 4538 4562 4 26 '3-1 60.86 2.4 1.2 intergenic UK114 - chr2L_4_15275001 chr2L_15275001 0.75 KT6_1-HE 63 chr2L 15859226 15859311 flea 4753 253 28 85 '19-9 68.92 8.2 3.0 intergenic not near genes chr2L_28_15855001 chr2L_15855001 0.68 KT6_1-HE 64 chr2L 15909819 15909895 Tirant 399 8117 16 76 '7-9 65.37 2.1 5.2 intron beat-Ib - chr2L_16_15905001 chr2L_15905001 0.44 KT6_1-HE 65 chr2L 15953312 15953338 F-element 40 14 13 26 '7-6 62.41 11.3 1.1 intron beat-Ib - chr2L_13_15950001 chr2L_15950001 0.54 KT6_1-HE 66 chr2L 16028207 16028285 hobo 2708 5 6 78 '2-4 65.79 5.9 0.9 intron beat-Ic + chr2L_6_16025001 chr2L_16025001 0.33 KT6_1-HE 67 chr2L 16107296 16107323 Rt1b 92 119 13 27 '5-8 53.79 5.1 2.1 intergenic not near genes chr2L_13_16105001 chr2L_16105001 0.38 KT6_1-HE 68 chr2L 16251803 16251872 P-element 3 2879 18 69 '12-6 42.25 5.7 2.7 intron PRL-1 - chr2L_18_16250001 chr2L_16250001 0.67 KT6_1-HE 69 chr2L 16547127 16547201 mdg3 5263 248 20 74 '11-9 62.61 5.3 3.2 intron CG42389 + chr2L_20_16545001 chr2L_16545001 0.55 KT6_1-HE 70 chr2L 16754687 16754764 pogo 2099 7 14 77 '9-5 66.14 4.0 2.8 intron yellow-b + chr2L_14_16750001 chr2L_16750001 0.64 KT6_1-HE 71 chr2L 16879767 16879849 blood 7012 7389 23 82 '11-12 63.71 8.6 2.4 5` UTR,exon CG31743 +,CG34313 + chr2L_23_16875001 chr2L_16875001 0.48 KT6_1-HE 72 chr2L 17533951 17533969 Doc 21 3 11 18 '7-4 52.10 8.4 1.2 intergenic not near genes chr2L_11_17530001 chr2L_17530001 0.64 KT6_1-HE 73 chr2L 17642067 17642149 copia 257 4871 21 82 '13-8 63.26 6.1 3.0 intergenic not near genes chr2L_21_17640001 chr2L_17640001 0.62 KT6_1-HE 74 chr2L 17702430 17702507 P-element 2 2886 30 77 '24-6 52.52 7.2 3.7 intron CadN - chr2L_30_17700001 chr2L_17700001 0.80 KT6_1-HE 75 chr2L 17708450 17708486 Doc 7 43 8 36 '3-5 65.52 0.3 6.2 intron CadN - chr2L_8_17705001 chr2L_17705001 0.38 KT6_1-HE 76 chr2L 17730435 17730517 pogo 2098 1 46 82 '16-30 66.05 10.3 4.1 intron CadN - chr2L_46_17730001 chr2L_17730001 0.35 KT6_1-HE 77 chr2L 17864845 17864919 F-element 13 4682 19 74 '10-9 63.99 9.9 1.7 intron CadN2 - chr2L_19_17860001 chr2L_17860001 0.53 KT6_1-HE 78 chr2L 17955791 17955870 pogo 2098 4 23 79 '11-12 67.60 5.3 3.7 intergenic not near genes chr2L_23_17955001 chr2L_17955001 0.48 KT6_1-HE 79 chr2L 18020971 18021044 G3 4507 4507 4 73 '2-2 58.77 5.2 0.6 intron rdo + chr2L_4_18020001 chr2L_18020001 0.50 KT6_1-HE 80 chr2L 18398589 18398609 X-element 4707 4691 4 20 '2-2 64.44 4.5 0.7 intergenic not near genes chr2L_4_18395001 chr2L_18395001 0.50 KT6_1-HE 81 chr2L 18429045 18429072 blood 7011 7038 18 27 '9-9 64.20 16.5 1.0 intergenic not near genes chr2L_18_18425001 chr2L_18425001 0.50 KT6_1-HE 82 chr2L 18431452 18431537 roo 8663 411 25 85 '7-18 70.79 4.2 4.8 intergenic not near genes chr2L_25_18430001 chr2L_18430001 0.28 KT6_1-HE 83 chr2L 18918271 18918298 Doc 28 1 22 27 '10-12 59.12 13.5 1.5 intron ssp3 - chr2L_22_18915001 chr2L_18915001 0.45 KT6_1-HE 84 chr2L 19193132 19193199 mdg1 7443 7037 22 67 '4-18 61.64 8.7 2.3 intron drl + chr2L_22_19190001 chr2L_19190001 0.18 KT6_1-HE 85 chr2L 19305654 19305731 mdg1 6 421 14 77 '6-8 63.60 4.6 2.5 intergenic not near genes chr2L_14_19305001 chr2L_19305001 0.43 KT6_1-HE 86 chr2L 19371291 19371318 Bari1 5 32 12 27 '6-6 63.05 4.5 2.2 exon CG17349 + chr2L_12_19370001 chr2L_19370001 0.50 KT6_1-HE 87 chr2L 19372100 19372117 Bari1 1687 1704 8 17 '4-4 58.22 2.2 2.5 intron CG17349 + chr2L_8_19370001 chr2L_19370001 0.50 KT6_1-HE 88 chr2L 19382914 19382998 roo 8663 409 28 84 '18-10 67.19 4.2 5.4 exon CG17350 + chr2L_28_19380001 chr2L_19380001 0.64 KT6_1-HE 89 chr2L 19412135 19412164 F-element 242 213 12 29 '7-5 61.51 4.3 2.3 intron Pax - chr2L_12_19410001 chr2L_19410001 0.58 KT6_1-HE 90 chr2L 19417069 19417238 BS 4992 5045 6 169 '5-1 66.89 5.5 0.9 intron Pax - chr2L_6_19415001 chr2L_19415001 0.83 KT6_1-HE 91 chr2L 19627241 19627315 hobo 2935 2 41 74 '10-31 62.37 12.2 3.1 intron Lar + chr2L_41_19625001 chr2L_19625001 0.24 KT6_1-HE 92 chr2L 19779021 19779089 hobo 2 2930 10 68 '8-2 61.68 6.4 1.4 exon CdGAPr - chr2L_10_19775001 chr2L_19775001 0.80 KT6_1-HE 93 chr2L 20023732 20023809 opus 499 8 21 77 '15-6 66.59 6.6 2.8 intergenic not near genes chr2L_21_20020001 chr2L_20020001 0.71 KT6_1-HE 94 chr2L 20552696 20552730 F-element 352 320 27 34 '13-14 60.86 13.7 1.8 intergenic not near genes chr2L_27_20550001 chr2L_20550001 0.48 KT6_1-HE 95 chr2L 20841948 20841975 G6 1994 2021 8 27 '5-3 57.90 15.9 0.5 intron CG31676 + chr2L_8_20840001 chr2L_20840001 0.62 KT6_1-HE 96 chr2L 20984307 20984325 blood 7010 17 8 18 '5-3 60.20 23.0 0.3 intron CG42238 - chr2L_8_20980001 chr2L_20980001 0.62 KT6_1-HE 97 chr2L 21192505 21192580 roo 402 1 17 75 '7-10 67.06 4.3 3.2 intron Ret - chr2L_17_21190001 chr2L_21190001 0.41 KT6_1-HE 98 chr2L 21285301 21285323 opus 7480 499 11 22 '5-6 64.09 7.3 1.3 intergenic not near genes chr2L_11_21285001 chr2L_21285001 0.45 KT6_1-HE 99 chr2L 21342383 21342462 pogo 6 2100 6 79 '4-2 62.28 6.2 0.8 intergenic dimm + chr2L_6_21340001 chr2L_21340001 0.67 KT6_1-HE 100 chr2L 21556057 21556076 flea 238 244 7 19 '3-4 59.40 5.0 1.2 intergenic not near genes chr2L_7_21555001 chr2L_21555001 0.43 KT6_1-HE 101 chr2L 21570229 21570256 Dm88 4388 4361 5 27 '4-1 66.05 1.8 1.8 intergenic not near genes chr2L_5_21570001 chr2L_21570001 0.80 KT6_1-HE 102 chr2L 21687116 21687137 mariner2 888 891 4 21 '2-2 63.75 2.7 1.1 intron CG31619 + chr2L_4_21685001 chr2L_21685001 0.50 KT6_1-HE 103 chr2L 21724031 21724115 pogo 2100 1 11 84 '3-8 65.81 4.8 1.9 intron CG31619 + chr2L_11_21720001 chr2L_21720001 0.27 KT6_1-HE 104 chr2L 22092978 22092996 INE-1 534 552 8 18 '5-3 59.99 11.7 0.6 intergenic not near genes chr2L_8_22090001 chr2L_22090001 0.62 KT6_1-HE 105 chr2L 22243114 22243193 diver 222 5889 26 79 '17-9 60.75 6.3 3.6 3` UTR CG3262 + chr2L_26_22240001 chr2L_22240001 0.65 KT6_1-HE 106 chr2L 22357756 22357780 Cr1a 4196 4171 7 24 '3-4 58.42 12.1 0.5 intron CG17018 + chr2L_7_22355001 chr2L_22355001 0.43 KT6_1-HE 107 chr2L 23048752 23048786 F-element 453 440 28 34 '24-4 59.23 8.7 2.9 intergenic not near genes chr2L_28_23045001 chr2L_23045001 0.86 KT6_1-HE 108 chr2L 23068853 23068929 1360 3 2 17 76 '10-7 65.48 3.6 3.7 intergenic CR43242 +,Spf45 - chr2L_17_23065001 chr2L_23065001 0.59 KT6_1-HE 109 chr2L 23295813 23295864 micropia 429 5 15 51 '9-6 66.66 8.9 1.5 intergenic not near genes chr2L_15_23295001 chr2L_23295001 0.60 KT6_1-HE 110 chr2L 23299979 23300001 invader4 3080 343 17 22 '12-5 57.17 7.0 2.1 intergenic not near genes chr2L_17_23295001 chr2L_23295001 0.71 KT6_1-HE 111 chr2R 403829 403892 flea 4759 227 12 63 '8-4 68.32 4.9 2.0 intergenic not near genes chr2R_12_400001 chr2R_400001 0.67 KT6_1-HE 112 chr2R 599260 599276 copia 257 241 5 16 '2-3 62.10 4.2 1.0 intron CG40378 + chr2R_5_595001 chr2R_595001 0.40 KT6_1-HE 113 chr2R 1081081 1081332 HMS-Beagle2 7020 7173 8 251 '1-7 63.49 3.7 1.7 intron rl + chr2R_8_1080001 chr2R_1080001 0.12 KT6_1-HE 114 chr2R 1444395 1444458 copia 253 4886 10 63 '7-3 65.13 4.2 1.9 intergenic l(2)41Ab + chr2R_10_1440001 chr2R_1440001 0.70 KT6_1-HE 115 chr2R 1521557 1521576 297 6971 6973 4 19 '2-2 59.99 8.9 0.4 5` UTR Maf1 - chr2R_4_1520001 chr2R_1520001 0.50 KT6_1-HE 116 chr2R 2009401 2009429 I-element 4 20 16 28 '9-7 75.54 5.0 2.7 intron CG17684 - chr2R_16_2005001 chr2R_2005001 0.56 KT6_1-HE 117 chr2R 2846984 2847012 Tc1-2 1503 1477 5 28 '4-1 61.17 6.5 0.7 intergenic CG41378 - chr2R_5_2845001 chr2R_2845001 0.80 KT6_1-HE 118 chr2R 3693442 3693462 Doc 22 2 8 20 '5-3 56.87 2.4 2.4 intergenic not near genes chr2R_8_3690001 chr2R_3690001 0.62 KT6_1-HE 119 chr2R 3919667 3919682 1360 3379 25 5 15 '2-3 58.45 9.5 0.5 intron uex - chr2R_5_3915001 chr2R_3915001 0.40 KT6_1-HE 120 chr2R 4156841 4156859 Doc 19 1 4 18 '2-2 63.00 4.0 0.8 intergenic not near genes chr2R_4_4155001 chr2R_4155001 0.50 KT6_1-HE 121 chr2R 4802882 4803055 mariner2 480 200 8 173 '7-1 65.62 10.0 0.7 intergenic not near genes chr2R_8_4800001 chr2R_4800001 0.88 KT6_1-HE 122 chr2R 4900352 4900368 Doc 24 8 9 16 '5-4 52.68 7.7 1.0 intron CG44102 - chr2R_9_4900001 chr2R_4900001 0.56 KT6_1-HE 123 chr2R 5018800 5018815 rooA 7269 49 6 15 '4-2 58.33 5.1 1.0 intron Ir41a + chr2R_6_5015001 chr2R_5015001 0.67 KT6_1-HE 124 chr2R 5178590 5178678 mdg3 250 5251 23 88 '3-20 61.92 5.8 3.4 exon Nipped-A - chr2R_23_5175001 chr2R_5175001 0.13 KT6_1-HE 125 chr2R 5432252 5432303 297 3 364 12 51 '10-2 65.57 10.3 1.1 intron laccase2 + chr2R_12_5430001 chr2R_5430001 0.83 KT6_1-HE 126 chr2R 5485061 5485139 1360 3388 3387 35 78 '22-13 66.51 7.0 4.4 intron CG30440 - chr2R_35_5485001 chr2R_5485001 0.63 KT6_1-HE 127 chr2R 5531164 5531184 1360 72 52 16 20 '9-7 59.53 11.9 1.2 intron CG30438 + chr2R_16_5530001 chr2R_5530001 0.56 KT6_1-HE 128 chr2R 5532315 5532342 G4 3761 3722 7 27 '1-6 62.22 36.3 0.2 intron CG30438 + chr2R_7_5530001 chr2R_5530001 0.14 KT6_1-HE 129 chr2R 5581684 5581899 gypsy10 5641 5982 37 215 '36-1 62.73 9.6 3.5 intergenic not near genes chr2R_37_5580001 chr2R_5580001 0.97 KT6_1-HE 130 chr2R 5674648 5674699 S-element 1714 37 6 51 '4-2 67.11 1.2 2.7 intergenic not near genes chr2R_6_5670001 chr2R_5670001 0.67 KT6_1-HE 131 chr2R 6086345 6086404 pogo 24 2098 7 59 '2-5 67.11 2.9 1.8 intergenic not near genes chr2R_7_6085001 chr2R_6085001 0.29 KT6_1-HE 132 chr2R 6174716 6174792 mdg3 241 5254 18 76 '8-10 67.04 5.0 3.0 exon Cyp6w1 + chr2R_18_6170001 chr2R_6170001 0.44 KT6_1-HE 133 chr2R 6198943 6199003 pogo 20 2095 4 60 '2-2 71.71 2.0 1.3 intergenic not near genes chr2R_4_6195001 chr2R_6195001 0.50 KT6_1-HE 134 chr2R 6218822 6219072 S-element 108 8 4 250 '1-3 63.82 1.3 1.7 intron bin3 + chr2R_4_6215001 chr2R_6215001 0.25 KT6_1-HE 135 chr2R 6234324 6234425 INE-1 82 85 6 101 '4-2 67.76 2.2 1.9 intron bin3 + chr2R_6_6230001 chr2R_6230001 0.67 KT6_1-HE 136 chr2R 6254429 6254474 flea 227 20 17 45 '8-9 68.27 3.1 4.1 intron Pld + chr2R_17_6250001 chr2R_6250001 0.47 KT6_1-HE 137 chr2R 6511505 6511591 Burdock 255 6134 23 86 '7-16 63.84 4.3 4.3 intron jing + chr2R_23_6510001 chr2R_6510001 0.30 KT6_1-HE 138 chr2R 6663924 6663955 1360 3386 3355 5 31 '4-1 69.31 1.7 1.9 intron,3` UTR Adf1 +,CR45128 - chr2R_5_6660001 chr2R_6660001 0.80 KT6_1-HE 139 chr2R 6681123 6681192 412 495 16 9 69 '3-6 69.40 4.2 1.7 intron CG9422 + chr2R_9_6680001 chr2R_6680001 0.33 KT6_1-HE 140 chr2R 6821810 6821868 opus 7480 5 5 58 '2-3 70.12 4.6 0.9 intron CR44442 - chr2R_5_6820001 chr2R_6820001 0.40 KT6_1-HE 141 chr2R 6887624 6887658 hobo 2706 2924 6 34 '2-4 66.37 5.5 0.9 intron Spn42De + chr2R_6_6885001 chr2R_6885001 0.33 KT6_1-HE 142 chr2R 6913610 6913691 diver 3 226 13 81 '9-4 63.84 4.8 2.2 intron CG30158 + chr2R_13_6910001 chr2R_6910001 0.69 KT6_1-HE 143 chr2R 7024395 7024457 diver 223 19 15 62 '11-4 66.99 2.5 4.3 intergenic CR44172 - chr2R_15_7020001 chr2R_7020001 0.73 KT6_1-HE 144 chr2R 7031442 7031525 HMS-Beagle 246 1 20 83 '5-15 65.55 6.2 2.8 intron Tsp42Eg + chr2R_20_7030001 chr2R_7030001 0.25 KT6_1-HE 145 chr2R 7097958 7098034 copia 4874 254 23 76 '7-16 69.40 4.8 4.0 intron esn + chr2R_23_7095001 chr2R_7095001 0.30 KT6_1-HE 146 chr2R 7490562 7490629 1360 3383 3381 12 67 '4-8 60.89 1.8 4.3 intergenic Coop - chr2R_12_7490001 chr2R_7490001 0.33 KT6_1-HE 147 chr2R 7546251 7546326 hopper 110 1 25 75 '12-13 60.76 6.0 3.6 intron Corin + chr2R_25_7545001 chr2R_7545001 0.48 KT6_1-HE 148 chr2R 7621290 7621373 roo 409 8664 27 83 '13-14 66.22 4.8 4.7 intergenic not near genes chr2R_27_7620001 chr2R_7620001 0.48 KT6_1-HE 149 chr2R 7727130 7727166 BS 4656 4692 4 36 '2-2 75.00 3.1 1.0 intron CG18812 - chr2R_4_7725001 chr2R_7725001 0.50 KT6_1-HE 150 chr2R 7759760 7759841 pogo 3 2099 20 81 '6-14 71.70 5.6 3.0 intron,intron CG30497 -,CG45093 - chr2R_20_7755001 chr2R_7755001 0.30 KT6_1-HE 151 chr2R 7763758 7763778 F-element 25 27 6 20 '2-4 59.15 3.8 1.2 intron,intron CG30497 -,CG45093 - chr2R_6_7760001 chr2R_7760001 0.33 KT6_1-HE 152 chr2R 7882341 7882426 HMS-Beagle 247 6796 15 85 '10-5 65.97 5.6 2.3 intron Dgk - chr2R_15_7880001 chr2R_7880001 0.67 KT6_1-HE 153 chr2R 7886080 7886346 jockey 4708 4710 4 266 '3-1 62.83 11.7 0.3 intergenic Dgk - chr2R_4_7885001 chr2R_7885001 0.75 KT6_1-HE 154 chr2R 8504084 8504119 roo 411 9039 12 35 '8-4 62.28 7.8 1.4 intron mtt - chr2R_12_8500001 chr2R_8500001 0.67 KT6_1-HE 155 chr2R 8557698 8557729 F-element 40 10 4 31 '2-2 68.42 8.9 0.4 intergenic not near genes chr2R_4_8555001 chr2R_8555001 0.50 KT6_1-HE 156 chr2R 8855833 8855903 roo 411 15 38 70 '27-11 70.45 6.6 5.0 3` UTR sns + chr2R_38_8855001 chr2R_8855001 0.71 KT6_1-HE 157 chr2R 8858643 8858752 1360 3092 3092 4 109 '2-2 74.56 3.7 0.9 intergenic not near genes chr2R_4_8855001 chr2R_8855001 0.50 KT6_1-HE 158 chr2R 8860203 8860219 I-element 5333 5349 4 16 '2-2 61.51 6.2 0.6 intergenic RyR + chr2R_4_8860001 chr2R_8860001 0.50 KT6_1-HE 159 chr2R 9091840 9091899 1360 3387 20 17 59 '15-2 66.44 4.4 3.1 intron CG8080 - chr2R_17_9090001 chr2R_9090001 0.88 KT6_1-HE 160 chr2R 9460156 9460592 412 199 7219 14 436 '7-7 61.57 3.0 3.5 intron Camta + chr2R_14_9460001 chr2R_9460001 0.50 KT6_1-HE 161 chr2R 9552742 9552772 P-element 33 2884 13 30 '9-4 45.18 4.5 2.4 intergenic CR43651 + chr2R_13_9550001 chr2R_9550001 0.69 KT6_1-HE 162 chr2R 9553418 9553445 P-element 2886 2859 13 27 '9-4 57.08 16.2 0.8 5` UTR CR43651 + chr2R_13_9550001 chr2R_9550001 0.69 KT6_1-HE 163 chr2R 9769543 9769603 1360 3388 318 12 60 '10-2 64.15 5.6 1.8 intron CG1688 - chr2R_12_9765001 chr2R_9765001 0.83 KT6_1-HE 164 chr2R 9793471 9793545 hobo 2 2935 14 74 '9-5 64.09 4.8 2.4 intron,5` UTR CG1688 -,CG1698 + chr2R_14_9790001 chr2R_9790001 0.64 KT6_1-HE 165 chr2R 9947980 9948015 jockey 5 36 17 35 '6-11 63.29 12.2 1.3 intron Mef2 - chr2R_17_9945001 chr2R_9945001 0.35 KT6_1-HE 166 chr2R 10773905 10774117 copia 4690 4866 14 212 '1-13 65.19 2.3 4.2 intron CG33144 - chr2R_14_10770001 chr2R_10770001 0.07 KT6_1-HE 167 chr2R 10945322 10945339 transib2 2820 2803 7 17 '4-3 63.91 8.2 0.8 intergenic not near genes chr2R_7_10945001 chr2R_10945001 0.57 KT6_1-HE 168 chr2R 11129677 11129748 hobo 1 2937 15 71 '9-6 60.01 6.5 2.0 intergenic not near genes chr2R_15_11125001 chr2R_11125001 0.60 KT6_1-HE 169 chr2R 11163397 11163476 1360 1 1 22 79 '15-7 66.99 5.0 3.7 intron,intron CG13229 -,shn + chr2R_22_11160001 chr2R_11160001 0.68 KT6_1-HE 170 chr2R 11562824 11562908 pogo 1 2100 24 84 '12-12 64.47 3.8 5.0 intergenic not near genes chr2R_24_11560001 chr2R_11560001 0.50 KT6_1-HE 171 chr2R 11575031 11575172 INE-1 148 137 10 141 '5-5 53.99 0.3 7.7 intergenic not near genes chr2R_10_11575001 chr2R_11575001 0.50 KT6_1-HE 172 chr2R 12137289 12137334 BS 4 5076 13 45 '6-7 59.51 15.0 0.8 intergenic not near genes chr2R_13_12135001 chr2R_12135001 0.46 KT6_1-HE 173 chr2R 12496964 12497032 roo 411 2 14 68 '12-2 60.64 4.6 2.5 intron,intron fdl -,s-cup + chr2R_14_12495001 chr2R_12495001 0.86 KT6_1-HE 174 chr2R 12591746 12591817 P-element 4 2882 16 71 '6-10 43.83 4.5 2.9 intron Sin3A - chr2R_16_12590001 chr2R_12590001 0.38 KT6_1-HE 175 chr2R 13053148 13053228 roo 8665 407 31 80 '8-23 66.64 5.2 5.0 intergenic not near genes chr2R_31_13050001 chr2R_13050001 0.26 KT6_1-HE 176 chr2R 13263249 13263280 I-element 5114 5083 8 31 '7-1 62.50 2.2 2.5 intron CG42319 + chr2R_8_13260001 chr2R_13260001 0.88 KT6_1-HE 177 chr2R 13379167 13379197 Doc 8 38 22 30 '10-12 64.06 14.4 1.4 intergenic not near genes chr2R_22_13375001 chr2R_13375001 0.45 KT6_1-HE 178 chr2R 13469793 13469877 blood 378 7011 17 84 '2-15 68.52 3.1 4.1 intron arr - chr2R_17_13465001 chr2R_13465001 0.12 KT6_1-HE 179 chr2R 13622962 13623082 P-element 9 2873 22 120 '17-5 49.05 9.2 2.2 intergenic fas + chr2R_22_13620001 chr2R_13620001 0.77 KT6_1-HE 180 chr2R 13677657 13677677 jockey 35 15 9 20 '6-3 61.26 11.9 0.7 intron fas + chr2R_9_13675001 chr2R_13675001 0.67 KT6_1-HE 181 chr2R 13934693 13934728 jockey 4746 4711 6 35 '4-2 67.55 7.0 0.8 intron shot - chr2R_6_13930001 chr2R_13930001 0.67 KT6_1-HE 182 chr2R 14385525 14385549 jockey 32 8 12 24 '5-7 64.42 8.0 1.3 intergenic Dh44-R1 + chr2R_12_14385001 chr2R_14385001 0.42 KT6_1-HE 183 chr2R 14405636 14405695 hopper 1413 20 13 59 '8-5 69.88 4.9 2.2 intergenic not near genes chr2R_13_14405001 chr2R_14405001 0.62 KT6_1-HE 184 chr2R 14753299 14753353 412 7535 7071 13 54 '1-12 65.78 1.2 5.9 intergenic ave +,CG10151 -,Rpn6 - chr2R_13_14750001 chr2R_14750001 0.08 KT6_1-HE 185 chr2R 15055051 15055133 pogo 2100 3 23 82 '12-11 69.66 7.0 2.9 intergenic CG33467 - chr2R_23_15055001 chr2R_15055001 0.52 KT6_1-HE 186 chr2R 15181130 15181207 Tabor 486 4 28 77 '10-18 68.06 5.7 4.2 intron igl + chr2R_28_15180001 chr2R_15180001 0.36 KT6_1-HE 187 chr2R 15339559 15339627 1360 3385 3380 16 68 '12-4 65.30 4.1 3.1 intergenic Hr51 + chr2R_16_15335001 chr2R_15335001 0.75 KT6_1-HE 188 chr2R 15393349 15393411 pogo 19 2097 17 62 '4-13 64.88 4.2 3.3 intergenic not near genes chr2R_17_15390001 chr2R_15390001 0.24 KT6_1-HE 189 chr2R 16412923 16412989 hobo 3 2928 14 66 '10-4 63.80 8.1 1.5 intron Sema-2b + chr2R_14_16410001 chr2R_16410001 0.71 KT6_1-HE 190 chr2R 16490159 16490251 blood 380 7009 41 92 '26-15 66.37 8.5 4.3 intergenic not near genes chr2R_41_16490001 chr2R_16490001 0.63 KT6_1-HE 191 chr2R 16496244 16496260 Quasimodo 36 36 4 16 '3-1 79.52 15.8 0.2 intergenic not near genes chr2R_4_16495001 chr2R_16495001 0.75 KT6_1-HE 192 chr2R 16510567 16510652 roo 8665 412 29 85 '8-21 64.27 7.2 3.5 intron Sema-2a + chr2R_29_16510001 chr2R_16510001 0.28 KT6_1-HE 193 chr2R 16871982 16872010 jockey 4791 4763 7 28 '3-4 61.47 0.6 4.4 intergenic CG6426 +,CG6421 + chr2R_7_16870001 chr2R_16870001 0.43 KT6_1-HE 194 chr2R 16891779 16891800 BS 24 3 16 21 '10-6 56.65 11.9 1.2 intron CG8910 - chr2R_16_16890001 chr2R_16890001 0.62 KT6_1-HE 195 chr2R 16917191 16917258 hopper 1408 9 26 67 '14-12 63.44 8.8 2.7 intergenic not near genes chr2R_26_16915001 chr2R_16915001 0.54 KT6_1-HE 196 chr2R 16940328 16940406 invader3 273 5185 13 78 '10-3 53.67 8.0 1.4 intron Pkc53E + chr2R_13_16940001 chr2R_16940001 0.77 KT6_1-HE 197 chr2R 17254926 17254998 mdg1 7177 7040 21 72 '7-14 58.30 2.5 6.0 intron,intron mbl +,CR43660 - chr2R_21_17250001 chr2R_17250001 0.33 KT6_1-HE 198 chr2R 17385905 17385987 roo 8664 407 12 82 '4-8 64.17 2.6 3.3 intergenic not near genes chr2R_12_17385001 chr2R_17385001 0.33 KT6_1-HE 199 chr2R 17420078 17420150 P-element 3 2882 8 72 '2-6 49.55 2.1 2.6 intergenic cnk -,l(2)k01209 + chr2R_8_17420001 chr2R_17420001 0.25 KT6_1-HE 200 chr2R 17670947 17670964 1360 23 6 7 17 '3-4 60.90 0.4 5.0 intergenic CR44404 +,CG30109 +,P32 - chr2R_7_17670001 chr2R_17670001 0.43 KT6_1-HE 201 chr2R 17943821 17943897 hobo 3 2938 22 76 '17-5 66.84 9.5 2.1 intergenic not near genes chr2R_22_17940001 chr2R_17940001 0.77 KT6_1-HE 202 chr2R 18376553 18376650 roo 8666 404 13 97 '10-3 65.69 1.8 4.6 intergenic not near genes chr2R_13_18375001 chr2R_18375001 0.77 KT6_1-HE 203 chr2R 18645996 18646079 roo 408 8663 18 83 '16-2 69.65 3.0 4.5 intron SP2637 - chr2R_18_18645001 chr2R_18645001 0.89 KT6_1-HE 204 chr2R 18716545 18716571 jockey 7 33 18 26 '10-8 61.05 11.6 1.4 intergenic not near genes chr2R_18_18715001 chr2R_18715001 0.56 KT6_1-HE 205 chr2R 18725438 18725520 flea 4753 5010 29 82 '17-12 65.80 8.4 3.1 intron Hs3st-A + chr2R_29_18725001 chr2R_18725001 0.59 KT6_1-HE 206 chr2R 19128651 19128735 3S18 5765 342 17 84 '14-3 66.22 3.9 3.5 intron CG15117 - chr2R_17_19125001 chr2R_19125001 0.82 KT6_1-HE 207 chr2R 19560313 19560388 hobo 4 2938 25 75 '19-6 63.68 4.6 4.5 intron sm - chr2R_25_19560001 chr2R_19560001 0.76 KT6_1-HE 208 chr2R 19569218 19569300 copia 1 256 35 82 '21-14 63.37 8.3 3.8 intron sm - chr2R_35_19565001 chr2R_19565001 0.60 KT6_1-HE 209 chr2R 20075760 20075836 gypsy10 341 5 5 76 '2-3 66.58 5.3 0.8 intergenic not near genes chr2R_5_20075001 chr2R_20075001 0.40 KT6_1-HE 210 chr2R 20274432 20274508 1360 1 3386 18 76 '4-14 62.74 7.7 2.1 5` UTR CG10444 - chr2R_18_20270001 chr2R_20270001 0.22 KT6_1-HE 211 chr2R 20419390 20419470 hobo 4 2707 27 80 '15-12 63.98 7.1 3.3 intergenic not near genes chr2R_27_20415001 chr2R_20415001 0.56 KT6_1-HE 212 chr2R 21158874 21159053 Juan 4214 4214 4 179 '1-3 76.97 3.0 1.0 intron CG30389 - chr2R_4_21155001 chr2R_21155001 0.25 KT6_1-HE 213 chr2R 21250930 21251006 P-element 3 2886 33 76 '19-14 49.74 7.4 3.9 5` UTR ASPP - chr2R_33_21250001 chr2R_21250001 0.58 KT6_1-HE 214 chr2R 21405331 21405406 accord 180 7029 4 75 '3-1 63.49 7.5 0.5 intron Sdc - chr2R_4_21405001 chr2R_21405001 0.75 KT6_1-HE 215 chr2R 21453959 21454117 297 6970 6882 23 158 '21-2 65.45 5.1 3.8 intron Sdc - chr2R_23_21450001 chr2R_21450001 0.91 KT6_1-HE 216 chr2R 21709875 21709926 I-element 23 5350 8 51 '7-1 65.62 4.7 1.4 intron HmgD + chr2R_8_21705001 chr2R_21705001 0.88 KT6_1-HE 217 chr2R 21729026 21729106 roo 1 407 21 80 '10-11 64.33 5.1 3.4 intergenic not near genes chr2R_21_21725001 chr2R_21725001 0.48 KT6_1-HE 218 chr2R 22119173 22119479 blood 7011 7322 28 306 '27-1 65.73 5.5 4.3 intron Vrp1 - chr2R_28_22115001 chr2R_22115001 0.96 KT6_1-HE 219 chr2R 22264943 22265007 mdg3 5498 19 36 64 '21-15 65.49 10.5 3.1 intron dve + chr2R_36_22260001 chr2R_22260001 0.58 KT6_1-HE 220 chr2R 22774967 22775000 jockey 6 36 22 33 '12-10 61.84 15.0 1.4 intron CG42260 - chr2R_22_22770001 chr2R_22770001 0.55 KT6_1-HE 221 chr2R 22833579 22833813 HMS-Beagle 89 246 17 234 '1-16 68.69 8.5 1.8 exon CG30265 + chr2R_17_22830001 chr2R_22830001 0.06 KT6_1-HE 222 chr2R 23024190 23024209 F-element 48 67 14 19 '5-9 52.71 12.1 1.1 intron,intron twi +,CG42741 - chr2R_14_23020001 chr2R_23020001 0.36 KT6_1-HE 223 chr2R 23152358 23152425 Ivk 5371 1 23 67 '5-18 60.63 5.5 3.5 intergenic CG43207 + chr2R_23_23150001 chr2R_23150001 0.22 KT6_1-HE 224 chr2R 24021572 24021645 pogo 10 2098 15 73 '7-8 67.35 3.6 3.3 intron CG3907 - chr2R_15_24020001 chr2R_24020001 0.47 KT6_1-HE 225 chr2R 24687730 24687819 blood 7009 381 22 89 '14-8 67.40 8.3 2.4 intergenic Mmp1 - chr2R_22_24685001 chr2R_24685001 0.64 KT6_1-HE 226 chr2R 25013370 25013448 Transpac 5224 4920 16 78 '7-9 65.38 4.9 2.7 intron uzip + chr2R_16_25010001 chr2R_25010001 0.44 KT6_1-HE 227 chr3L 46939 46984 FB 21 13 5 45 '2-3 66.32 3.5 1.1 intergenic not near genes chr3L_5_45001 chr3L_45001 0.40 KT6_1-HE 228 chr3L 207830 207846 412 7529 7545 8 16 '4-4 59.21 6.2 1.1 intron CG7028 - chr3L_8_205001 chr3L_205001 0.50 KT6_1-HE 229 chr3L 699736 699794 P-element 2883 2869 17 58 '13-4 50.73 4.4 3.1 intergenic not near genes chr3L_17_695001 chr3L_695001 0.76 KT6_1-HE 230 chr3L 981183 981282 Stalker2 264 7514 4 99 '2-2 52.30 3.6 0.9 exon Glut1 + chr3L_4_980001 chr3L_980001 0.50 KT6_1-HE 231 chr3L 2031148 2031229 gypsy5 414 7 51 81 '18-33 61.73 9.7 4.8 intergenic not near genes chr3L_51_2030001 chr3L_2030001 0.35 KT6_1-HE 232 chr3L 2325753 2325875 Doc 4687 4687 4 122 '1-3 69.08 4.2 0.8 intron MsR1 + chr3L_4_2325001 chr3L_2325001 0.25 KT6_1-HE 233 chr3L 2381513 2381594 mdg1 7040 421 6 81 '2-4 65.06 4.3 1.1 intergenic not near genes chr3L_6_2380001 chr3L_2380001 0.33 KT6_1-HE 234 chr3L 3250441 3250666 P-element 2883 3 22 225 '11-11 49.43 2.3 6.7 5` UTR CR43626 + chr3L_22_3250001 chr3L_3250001 0.50 KT6_1-HE 235 chr3L 3540129 3540212 mdg3 5497 5251 54 83 '25-29 62.91 11.5 4.3 intron Eip63E + chr3L_54_3540001 chr3L_3540001 0.46 KT6_1-HE 236 chr3L 3925955 3926148 I-element 5115 5 7 193 '1-6 63.16 1.2 3.2 intron Eip63F-1 - chr3L_7_3925001 chr3L_3925001 0.14 KT6_1-HE 237 chr3L 4180390 4180475 roo 409 8662 22 85 '11-11 67.73 5.8 3.2 intron,intron CG18675 +,Teh2 - chr3L_22_4180001 chr3L_4180001 0.50 KT6_1-HE 238 chr3L 4210711 4210790 roo 8 413 21 79 '5-16 67.92 6.0 3.0 intron CG43367 + chr3L_21_4210001 chr3L_4210001 0.24 KT6_1-HE 239 chr3L 4356740 4356764 pogo 3 27 11 24 '4-7 65.43 8.3 1.2 intron Cip4 - chr3L_11_4355001 chr3L_4355001 0.36 KT6_1-HE 240 chr3L 4501560 4501812 jockey 4985 454 13 252 '12-1 62.97 4.7 2.3 intergenic NT1 - chr3L_13_4500001 chr3L_4500001 0.92 KT6_1-HE 241 chr3L 4738400 4738460 Idefix 7370 2 16 60 '2-14 69.41 9.6 1.5 intron RhoGEF64C + chr3L_16_4735001 chr3L_4735001 0.12 KT6_1-HE 242 chr3L 4769562 4769625 copia 238 4871 10 63 '2-8 63.55 2.8 2.6 intron RhoGEF64C + chr3L_10_4765001 chr3L_4765001 0.20 KT6_1-HE 243 chr3L 5438750 5438819 hopper 11 1412 13 69 '4-9 63.89 7.0 1.6 intron CG34391 + chr3L_13_5435001 chr3L_5435001 0.31 KT6_1-HE 244 chr3L 5537716 5537747 jockey 36 5 5 31 '2-3 64.80 3.6 1.1 intergenic not near genes chr3L_5_5535001 chr3L_5535001 0.40 KT6_1-HE 245 chr3L 6051849 6051935 297 395 1 8 86 '1-7 68.09 3.9 1.6 intergenic Jon65Aiii +,Jon65Aii + chr3L_8_6050001 chr3L_6050001 0.12 KT6_1-HE 246 chr3L 6388877 6388969 opus 499 7113 9 92 '7-2 65.20 5.7 1.3 intergenic not near genes chr3L_9_6385001 chr3L_6385001 0.78 KT6_1-HE 247 chr3L 7017089 7017177 opus 110 499 11 88 '4-7 68.06 6.5 1.5 intron Mp + chr3L_11_7015001 chr3L_7015001 0.36 KT6_1-HE 248 chr3L 7195412 7195520 hobo 2708 2479 29 108 '9-20 63.29 8.6 3.0 intergenic not near genes chr3L_29_7195001 chr3L_7195001 0.31 KT6_1-HE 249 chr3L 7278435 7278515 hobo 2708 3 34 80 '15-19 62.73 6.8 4.4 intron unc-13-4A - chr3L_34_7275001 chr3L_7275001 0.44 KT6_1-HE 250 chr3L 7458346 7458419 3S18 3 334 18 73 '16-2 62.87 5.2 2.9 exon ppk26 + chr3L_18_7455001 chr3L_7455001 0.89 KT6_1-HE 251 chr3L 7505513 7505597 Burdock 6135 254 32 84 '10-22 65.50 4.6 5.7 intergenic CG7548 - chr3L_32_7505001 chr3L_7505001 0.31 KT6_1-HE 252 chr3L 7614465 7614536 pogo 7 2093 22 71 '14-8 64.65 7.0 2.8 intron CG33275 + chr3L_22_7610001 chr3L_7610001 0.64 KT6_1-HE 253 chr3L 8258423 8258499 hobo 3 2933 11 76 '7-4 58.41 6.7 1.4 intron Dscam4 + chr3L_11_8255001 chr3L_8255001 0.64 KT6_1-HE 254 chr3L 8556260 8556347 roo 410 8661 27 87 '16-11 62.63 6.4 3.6 intron rhea + chr3L_27_8555001 chr3L_8555001 0.59 KT6_1-HE 255 chr3L 9194852 9195107 Tirant 209 404 48 255 '1-47 66.81 13.2 3.4 intergenic not near genes chr3L_48_9190001 chr3L_9190001 0.02 KT6_1-HE 256 chr3L 9466508 9466588 hopper 1413 1 12 80 '2-10 64.76 5.0 2.0 intron CG44838 + chr3L_12_9465001 chr3L_9465001 0.17 KT6_1-HE 257 chr3L 9923477 9923559 blood 374 7010 39 82 '14-25 68.97 10.7 3.3 intron CG34356 + chr3L_39_9920001 chr3L_9920001 0.36 KT6_1-HE 258 chr3L 9981013 9981035 Doc 4260 4238 9 22 '4-5 63.31 5.7 1.3 intron dpr6 + chr3L_9_9980001 chr3L_9980001 0.44 KT6_1-HE 259 chr3L 9991471 9991529 roo 410 8690 25 58 '18-7 72.84 8.3 2.7 intron dpr6 + chr3L_25_9990001 chr3L_9990001 0.72 KT6_1-HE 260 chr3L 10161363 10161451 opus 499 110 33 88 '13-20 68.05 8.2 3.6 intron dpr10 - chr3L_33_10160001 chr3L_10160001 0.39 KT6_1-HE 261 chr3L 10370716 10370964 copia 122 249 17 248 '1-16 64.32 3.8 3.5 intergenic not near genes chr3L_17_10370001 chr3L_10370001 0.06 KT6_1-HE 262 chr3L 10424169 10424258 Tirant 8107 404 26 89 '8-18 65.56 11.0 2.2 intergenic not near genes chr3L_26_10420001 chr3L_10420001 0.31 KT6_1-HE 263 chr3L 10618557 10618614 copia 4869 258 7 57 '2-5 38.91 0.0 7.0 intergenic not near genes chr3L_7_10615001 chr3L_10615001 0.29 KT6_1-HE 264 chr3L 10722952 10723029 412 495 9 16 77 '4-12 61.97 5.5 2.5 intergenic not near genes chr3L_16_10720001 chr3L_10720001 0.25 KT6_1-HE 265 chr3L 10770288 10770371 blood 379 7012 21 83 '14-7 61.22 9.1 2.1 intergenic not near genes chr3L_21_10770001 chr3L_10770001 0.67 KT6_1-HE 266 chr3L 10811568 10811585 Juan 4203 4186 7 17 '3-4 75.19 11.6 0.6 intergenic not near genes chr3L_7_10810001 chr3L_10810001 0.43 KT6_1-HE 267 chr3L 11126674 11126749 pogo 1 2091 12 75 '7-5 66.20 3.2 2.9 intron CG42575 + chr3L_12_11125001 chr3L_11125001 0.58 KT6_1-HE 268 chr3L 11257353 11257402 1360 2 3385 9 49 '2-7 61.68 5.8 1.3 intergenic not near genes chr3L_9_11255001 chr3L_11255001 0.22 KT6_1-HE 269 chr3L 11284660 11284716 jockey 4555 4989 26 56 '16-10 59.22 8.7 2.7 intergenic CR45404 + chr3L_26_11280001 chr3L_11280001 0.62 KT6_1-HE 270 chr3L 11798791 11798863 Tabor 7322 6848 20 72 '9-11 59.94 2.4 5.9 3` UTR Klp68D + chr3L_20_11795001 chr3L_11795001 0.45 KT6_1-HE 271 chr3L 11867342 11867409 Max-element 286 8236 34 67 '5-29 65.24 6.8 4.4 intron CG44837 - chr3L_34_11865001 chr3L_11865001 0.15 KT6_1-HE 272 chr3L 12777254 12777371 Doc2-element 238 238 5 117 '4-1 75.60 6.5 0.7 exon CG32106 - chr3L_5_12775001 chr3L_12775001 0.80 KT6_1-HE 273 chr3L 12889203 12889273 roo 8679 411 30 70 '9-21 63.04 6.8 3.8 3` UTR CG14120 + chr3L_30_12885001 chr3L_12885001 0.30 KT6_1-HE 274 chr3L 13159261 13159395 NOF 3956 3956 4 134 '2-2 70.37 8.8 0.4 intergenic not near genes chr3L_4_13155001 chr3L_13155001 0.50 KT6_1-HE 275 chr3L 13235127 13235209 Bari1 1 1703 24 82 '11-13 63.41 6.3 3.3 intron caps + chr3L_24_13235001 chr3L_13235001 0.46 KT6_1-HE 276 chr3L 13263342 13263436 mdg1 7078 37 4 94 '2-2 68.09 6.2 0.6 intron caps + chr3L_4_13260001 chr3L_13260001 0.50 KT6_1-HE 277 chr3L 13335389 13335470 pogo 2097 1 21 81 '6-15 66.56 7.6 2.4 intergenic not near genes chr3L_21_13335001 chr3L_13335001 0.29 KT6_1-HE 278 chr3L 13346000 13346068 pogo 2089 6 5 68 '4-1 65.17 7.4 0.6 intergenic not near genes chr3L_5_13345001 chr3L_13345001 0.80 KT6_1-HE 279 chr3L 13390423 13390482 gypsy12 10190 29 5 59 '3-2 60.00 4.6 0.9 intergenic Poc1 - chr3L_5_13390001 chr3L_13390001 0.60 KT6_1-HE 280 chr3L 13556597 13556627 copia 156 127 22 30 '10-12 63.31 9.6 2.1 intron bru-3 - chr3L_22_13555001 chr3L_13555001 0.45 KT6_1-HE 281 chr3L 13562313 13562536 hobo 2938 57 24 223 '23-1 63.85 5.2 3.9 intron bru-3 - chr3L_24_13560001 chr3L_13560001 0.96 KT6_1-HE 282 chr3L 13567311 13567347 jockey 4571 4536 20 36 '11-9 63.19 11.9 1.6 intron bru-3 - chr3L_20_13565001 chr3L_13565001 0.55 KT6_1-HE 283 chr3L 13614927 13615013 297 395 6580 14 86 '9-5 68.18 12.2 1.1 intron bru-3 - chr3L_14_13610001 chr3L_13610001 0.64 KT6_1-HE 284 chr3L 13625875 13625942 roo 8662 391 32 67 '16-16 66.03 3.0 8.0 intron bru-3 - chr3L_32_13625001 chr3L_13625001 0.50 KT6_1-HE 285 chr3L 14257340 14257404 roo 9052 8663 12 64 '6-6 69.08 4.5 2.2 intergenic not near genes chr3L_12_14255001 chr3L_14255001 0.50 KT6_1-HE 286 chr3L 14396973 14397027 BS 4992 5072 6 54 '2-4 61.04 0.0 6.0 intergenic not near genes chr3L_6_14395001 chr3L_14395001 0.33 KT6_1-HE 287 chr3L 14530163 14530292 pogo 20 2092 20 129 '9-11 70.58 1.3 8.7 intron bbg - chr3L_20_14530001 chr3L_14530001 0.45 KT6_1-HE 288 chr3L 14878636 14878694 Juan 1 4205 36 58 '24-12 67.13 16.1 2.1 intron CG17839 + chr3L_36_14875001 chr3L_14875001 0.67 KT6_1-HE 289 chr3L 15056303 15056320 BS 4992 5010 18 17 '8-10 68.39 5.6 2.7 intron Sytbeta - chr3L_18_15055001 chr3L_15055001 0.44 KT6_1-HE 290 chr3L 15099575 15099621 G4 3817 3805 9 46 '8-1 65.20 4.3 1.7 intron CTPsyn + chr3L_9_15095001 chr3L_15095001 0.89 KT6_1-HE 291 chr3L 15249972 15250041 3S18 326 5764 13 69 '3-10 62.00 1.6 5.0 intergenic not near genes chr3L_13_15245001 chr3L_15245001 0.23 KT6_1-HE 292 chr3L 16367901 16367980 HMS-Beagle 6796 241 11 79 '10-1 64.00 5.1 1.8 intergenic CG4842 + chr3L_11_16365001 chr3L_16365001 0.91 KT6_1-HE 293 chr3L 16662400 16662463 jockey 4983 4672 8 63 '5-3 60.06 4.7 1.4 intergenic Galphaf - chr3L_8_16660001 chr3L_16660001 0.62 KT6_1-HE 294 chr3L 16771045 16771108 FB 5 11 4 63 '3-1 57.89 1.9 1.4 intron Nrt + chr3L_4_16770001 chr3L_16770001 0.75 KT6_1-HE 295 chr3L 17260811 17260892 blood 2 377 23 81 '10-13 62.87 7.2 2.8 intron CR43870 + chr3L_23_17260001 chr3L_17260001 0.43 KT6_1-HE 296 chr3L 17276549 17276607 blood 362 7021 17 58 '5-12 65.04 3.3 4.0 intergenic not near genes chr3L_17_17275001 chr3L_17275001 0.29 KT6_1-HE 297 chr3L 17549828 17549850 F-element 73 51 14 22 '8-6 52.52 6.0 2.0 5` UTR CG7542 + chr3L_14_17545001 chr3L_17545001 0.57 KT6_1-HE 298 chr3L 18185598 18185673 P-element 2 2884 30 75 '17-13 48.30 9.2 2.9 5` UTR W - chr3L_30_18185001 chr3L_18185001 0.57 KT6_1-HE 299 chr3L 18423637 18423717 297 1 391 30 80 '15-15 66.22 14.3 2.0 intergenic not near genes chr3L_30_18420001 chr3L_18420001 0.50 KT6_1-HE 300 chr3L 18464605 18464691 copia 4867 257 17 86 '10-7 62.80 5.9 2.5 intergenic not near genes chr3L_17_18460001 chr3L_18460001 0.59 KT6_1-HE 301 chr3L 18738074 18738149 Bari1 12 1707 29 75 '8-21 65.30 5.2 4.7 intergenic not near genes chr3L_29_18735001 chr3L_18735001 0.28 KT6_1-HE 302 chr3L 18886534 18886557 Doc 26 3 9 23 '5-4 57.67 5.2 1.5 intron CG3961 - chr3L_9_18885001 chr3L_18885001 0.56 KT6_1-HE 303 chr3L 18957182 18957485 BS 5028 5036 10 303 '9-1 62.86 5.3 1.6 intergenic not near genes chr3L_10_18955001 chr3L_18955001 0.90 KT6_1-HE 304 chr3L 19015403 19015490 roo 8662 410 30 87 '6-24 66.60 7.0 3.8 intron nkd - chr3L_30_19015001 chr3L_19015001 0.20 KT6_1-HE 305 chr3L 19050741 19050771 X-element 4418 4388 6 30 '3-3 62.94 2.8 1.6 intergenic Acp76A - chr3L_6_19050001 chr3L_19050001 0.50 KT6_1-HE 306 chr3L 19202773 19202843 Tc3 315 312 5 70 '1-4 59.47 8.7 0.5 intron fz2 - chr3L_5_19200001 chr3L_19200001 0.20 KT6_1-HE 307 chr3L 19274800 19274880 transib2 2 2823 11 80 '8-3 63.76 3.5 2.4 intergenic not near genes chr3L_11_19270001 chr3L_19270001 0.73 KT6_1-HE 308 chr3L 19339394 19339429 Tc1 36 1 21 35 '8-13 66.49 5.9 3.0 intergenic not near genes chr3L_21_19335001 chr3L_19335001 0.38 KT6_1-HE 309 chr3L 19357034 19357067 jockey 5 36 23 33 '10-13 66.94 13.4 1.6 intron CG32206 - chr3L_23_19355001 chr3L_19355001 0.43 KT6_1-HE 310 chr3L 19429917 19429948 jockey 6 37 27 31 '9-18 64.34 16.9 1.5 intergenic not near genes chr3L_27_19425001 chr3L_19425001 0.33 KT6_1-HE 311 chr3L 19463698 19463752 copia 245 4887 5 54 '3-2 61.05 1.4 2.1 intergenic CG14095 - chr3L_5_19460001 chr3L_19460001 0.60 KT6_1-HE 312 chr3L 20032590 20032689 hopper 11 1413 12 99 '8-4 62.14 3.8 2.5 intergenic not near genes chr3L_12_20030001 chr3L_20030001 0.67 KT6_1-HE 313 chr3L 20224143 20224220 Chimpo 187 6 11 77 '5-6 63.35 3.6 2.4 intron CG17147 + chr3L_11_20220001 chr3L_20220001 0.45 KT6_1-HE 314 chr3L 20711643 20711693 jockey 4976 4758 8 50 '6-2 68.01 4.9 1.4 intergenic not near genes chr3L_8_20710001 chr3L_20710001 0.75 KT6_1-HE 315 chr3L 20713140 20713491 hopper 1382 1414 14 351 '1-13 62.68 5.9 2.0 3` UTR cmpy - chr3L_14_20710001 chr3L_20710001 0.07 KT6_1-HE 316 chr3L 20955542 20955627 roo 411 8664 28 85 '22-6 68.19 7.1 3.5 intergenic Sems - chr3L_28_20955001 chr3L_20955001 0.79 KT6_1-HE 317 chr3L 21145694 21145709 INE-1 551 566 6 15 '3-3 56.36 2.4 1.8 intron Ac78C - chr3L_6_21145001 chr3L_21145001 0.50 KT6_1-HE 318 chr3L 21740783 21740836 pogo 2074 6 7 53 '1-6 65.41 3.0 1.8 intergenic CG14566 - chr3L_7_21740001 chr3L_21740001 0.14 KT6_1-HE 319 chr3L 21786938 21786988 roo 4 9043 15 50 '8-7 69.01 1.6 5.8 intergenic not near genes chr3L_15_21785001 chr3L_21785001 0.53 KT6_1-HE 320 chr3L 21861389 21861708 1360 31 3386 13 319 '12-1 65.08 4.1 2.5 intron mub + chr3L_13_21860001 chr3L_21860001 0.92 KT6_1-HE 321 chr3L 22198552 22198587 roo 410 9040 19 35 '6-13 68.73 8.8 1.9 intron olf413 + chr3L_19_22195001 chr3L_22195001 0.32 KT6_1-HE 322 chr3L 22349206 22349258 jockey 7 4981 32 52 '27-5 60.38 12.8 2.3 intron Ten-m - chr3L_32_22345001 chr3L_22345001 0.84 KT6_1-HE 323 chr3L 22636071 22636135 I-element 2 5347 23 64 '18-5 63.99 9.5 2.2 intron CG14459 - chr3L_23_22635001 chr3L_22635001 0.78 KT6_1-HE 324 chr3L 22982233 22982381 jockey 28 123 29 148 '28-1 63.90 11.6 2.3 intergenic not near genes chr3L_29_22980001 chr3L_22980001 0.97 KT6_1-HE 325 chr3L 22984729 22984757 pogo 2099 2071 9 28 '5-4 69.38 14.7 0.6 intergenic not near genes chr3L_9_22980001 chr3L_22980001 0.56 KT6_1-HE 326 chr3L 23123522 23123602 297 6581 6971 9 80 '5-4 66.10 3.9 1.8 intergenic not near genes chr3L_9_23120001 chr3L_23120001 0.56 KT6_1-HE 327 chr3L 23746964 23747152 INE-1 95 311 5 188 '1-4 77.11 10.2 0.4 intron CG17698 + chr3L_5_23745001 chr3L_23745001 0.20 KT6_1-HE 328 chr3L 24034861 24034886 1360 65 57 12 25 '5-7 59.66 2.5 3.4 intron CG40045 + chr3L_12_24030001 chr3L_24030001 0.42 KT6_1-HE 329 chr3L 24120328 24120414 G5A 2439 2440 4 86 '2-2 73.43 18.9 0.2 intron Snap25 + chr3L_4_24120001 chr3L_24120001 0.50 KT6_1-HE 330 chr3L 25232763 25232856 accord2 7629 2 12 93 '11-1 59.90 6.5 1.6 intergenic not near genes chr3L_12_25230001 chr3L_25230001 0.92 KT6_1-HE 331 chr3L 27356085 27356108 Tc3 1702 1679 13 23 '7-6 71.05 11.7 1.0 intron Dbp80 + chr3L_13_27355001 chr3L_27355001 0.54 KT6_1-HE 332 chr3L 27415225 27415305 transib2 2822 1 21 80 '15-6 65.25 6.7 2.7 intron Dbp80 + chr3L_21_27415001 chr3L_27415001 0.71 KT6_1-HE 333 chr3R 2474296 2474338 Juan 4210 3993 7 42 '6-1 54.52 8.3 0.8 intergenic not near genes chr3R_7_2470001 chr3R_2470001 0.86 KT6_1-HE 334 chr3R 2525955 2525973 Stalker2 15 7248 12 18 '3-9 65.58 21.2 0.5 intergenic not near genes chr3R_12_2525001 chr3R_2525001 0.25 KT6_1-HE 335 chr3R 2533850 2533929 gypsy8 4816 4902 8 79 '3-5 60.84 27.5 0.3 intergenic not near genes chr3R_8_2530001 chr3R_2530001 0.38 KT6_1-HE 336 chr3R 2999770 2999839 McClintock 6417 1 10 69 '3-7 68.29 3.3 2.3 intron CG42618 - chr3R_10_2995001 chr3R_2995001 0.30 KT6_1-HE 337 chr3R 3257581 3257598 gypsy 7432 463 5 17 '2-3 66.25 3.0 1.2 intron CG42617 - chr3R_5_3255001 chr3R_3255001 0.40 KT6_1-HE 338 chr3R 4139005 4139086 3S18 341 2 26 81 '4-22 63.16 1.7 9.6 intergenic CR41601 - chr3R_26_4135001 chr3R_4135001 0.15 KT6_1-HE 339 chr3R 4190909 4190970 pogo 6 2082 8 61 '6-2 71.67 2.3 2.4 intergenic not near genes chr3R_8_4190001 chr3R_4190001 0.75 KT6_1-HE 340 chr3R 4197928 4197966 1360 30 3376 6 38 '2-4 64.47 1.7 2.2 intron CG12582 + chr3R_6_4195001 chr3R_4195001 0.33 KT6_1-HE 341 chr3R 4282454 4282529 P-element 4 2886 32 75 '22-10 52.51 11.2 2.6 intron cpx + chr3R_32_4280001 chr3R_4280001 0.69 KT6_1-HE 342 chr3R 4361584 4361668 copia 257 4869 19 84 '8-11 67.07 4.3 3.6 intron CG1090 + chr3R_19_4360001 chr3R_4360001 0.42 KT6_1-HE 343 chr3R 4530694 4530776 copia 253 4867 34 82 '21-13 62.28 6.9 4.3 intron CG34357 - chr3R_34_4530001 chr3R_4530001 0.62 KT6_1-HE 344 chr3R 4668793 4668847 FB 10 19 6 54 '3-3 65.72 2.7 1.6 intron CG43427 + chr3R_6_4665001 chr3R_4665001 0.50 KT6_1-HE 345 chr3R 4679464 4679490 hopper 1410 1405 6 26 '2-4 62.24 4.9 1.0 intron CG43427 + chr3R_6_4675001 chr3R_4675001 0.33 KT6_1-HE 346 chr3R 5170978 5171000 F-element 20 41 5 22 '4-1 64.44 15.0 0.3 intergenic not near genes chr3R_5_5170001 chr3R_5170001 0.80 KT6_1-HE 347 chr3R 5559547 5559618 flea 4754 240 8 71 '5-3 67.11 4.1 1.6 exon Pi4KIIalpha - chr3R_8_5555001 chr3R_5555001 0.62 KT6_1-HE 348 chr3R 5599489 5599562 Transpac 3 5222 11 73 '8-3 64.44 3.3 2.6 intron kra - chr3R_11_5595001 chr3R_5595001 0.73 KT6_1-HE 349 chr3R 6006981 6007048 I-element 5339 5350 8 67 '5-3 58.73 5.2 1.3 intron Rm62 - chr3R_8_6005001 chr3R_6005001 0.62 KT6_1-HE 350 chr3R 6012661 6012744 opus 112 7499 35 83 '9-26 68.49 9.5 3.3 intergenic not near genes chr3R_35_6010001 chr3R_6010001 0.26 KT6_1-HE 351 chr3R 6117257 6117333 flea 5003 4753 9 76 '3-6 60.53 4.8 1.6 intergenic not near genes chr3R_9_6115001 chr3R_6115001 0.33 KT6_1-HE 352 chr3R 6546153 6546239 297 6580 395 35 86 '22-13 69.85 14.9 2.2 intron dpr11 - chr3R_35_6545001 chr3R_6545001 0.63 KT6_1-HE 353 chr3R 6813429 6813513 Transpac 1 311 13 84 '8-5 61.46 4.1 2.5 intron CR42651 - chr3R_13_6810001 chr3R_6810001 0.62 KT6_1-HE 354 chr3R 6993588 6993620 jockey 36 5 25 32 '12-13 63.66 7.6 2.9 intron Antp - chr3R_25_6990001 chr3R_6990001 0.48 KT6_1-HE 355 chr3R 7050769 7050794 rover 24 6950 13 25 '5-8 67.71 4.4 2.4 intergenic not near genes chr3R_13_7050001 chr3R_7050001 0.38 KT6_1-HE 356 chr3R 7159498 7159517 297 6581 6600 8 19 '3-5 65.46 12.5 0.6 intergenic not near genes chr3R_8_7155001 chr3R_7155001 0.38 KT6_1-HE 357 chr3R 7207323 7207419 roo 8988 6 21 96 '11-10 67.28 7.7 2.4 intergenic CG1288 - chr3R_21_7205001 chr3R_7205001 0.52 KT6_1-HE 358 chr3R 7471893 7471927 jockey 4 15 13 34 '7-6 66.16 7.1 1.6 intergenic not near genes chr3R_13_7470001 chr3R_7470001 0.54 KT6_1-HE 359 chr3R 7475091 7475149 Tc3 242 316 6 58 '2-4 66.56 5.0 1.0 intergenic snRNA:7SK - chr3R_6_7475001 chr3R_7475001 0.33 KT6_1-HE 360 chr3R 7645110 7645383 I-element 2 4923 26 273 '25-1 65.04 4.4 4.8 intergenic not near genes chr3R_26_7645001 chr3R_7645001 0.96 KT6_1-HE 361 chr3R 7655574 7655658 412 4 491 12 84 '7-5 60.74 6.3 1.6 intergenic not near genes chr3R_12_7655001 chr3R_7655001 0.58 KT6_1-HE 362 chr3R 7764417 7764434 17.6 7398 7415 6 17 '3-3 69.96 4.9 1.0 intergenic not near genes chr3R_6_7760001 chr3R_7760001 0.50 KT6_1-HE 363 chr3R 7868724 7868961 jockey 4947 6 14 237 '1-13 61.98 8.1 1.5 intron CG17816 - chr3R_14_7865001 chr3R_7865001 0.07 KT6_1-HE 364 chr3R 7967528 7967553 jockey 4988 4963 8 25 '3-5 62.26 4.7 1.4 intergenic dsx - chr3R_8_7965001 chr3R_7965001 0.38 KT6_1-HE 365 chr3R 7981576 7981592 jockey 18 33 6 16 '2-4 60.68 7.3 0.7 intergenic CG2781 - chr3R_6_7980001 chr3R_7980001 0.33 KT6_1-HE 366 chr3R 8007493 8007569 copia 2 251 16 76 '9-7 64.47 4.4 3.0 exon CG2767 - chr3R_16_8005001 chr3R_8005001 0.56 KT6_1-HE 367 chr3R 8090527 8090571 P-element 2872 21 8 44 '4-4 40.13 4.9 1.4 intergenic CR44330 + chr3R_8_8090001 chr3R_8090001 0.50 KT6_1-HE 368 chr3R 8201136 8201215 297 6 395 11 79 '1-10 66.42 5.6 1.7 intergenic CR43303 + chr3R_11_8200001 chr3R_8200001 0.09 KT6_1-HE 369 chr3R 8434224 8434304 Stalker4 411 6961 11 80 '3-8 57.06 4.4 2.0 intron CG45263 - chr3R_11_8430001 chr3R_8430001 0.27 KT6_1-HE 370 chr3R 8434276 8434310 Stalker 6882 6848 5 34 '3-2 66.84 3.4 1.1 intron CG45263 - chr3R_5_8430001 chr3R_8430001 0.60 KT6_1-HE 371 chr3R 8544289 8544342 Tabor 8 7302 15 53 '14-1 67.43 3.6 3.3 intergenic not near genes chr3R_15_8540001 chr3R_8540001 0.93 KT6_1-HE 372 chr3R 8916311 8916385 FB 1 4 8 74 '6-2 64.97 4.5 1.5 intron pyd - chr3R_8_8915001 chr3R_8915001 0.75 KT6_1-HE 373 chr3R 9534543 9534573 Doc 49 79 8 30 '3-5 59.05 4.8 1.4 intergenic not near genes chr3R_8_9530001 chr3R_9530001 0.38 KT6_1-HE 374 chr3R 10039855 10039938 412 496 3 19 83 '8-11 66.04 6.4 2.6 intron Mical - chr3R_19_10035001 chr3R_10035001 0.42 KT6_1-HE 375 chr3R 10157761 10157826 pogo 4 2084 15 65 '14-1 65.53 5.3 2.4 exon Invadolysin + chr3R_15_10155001 chr3R_10155001 0.93 KT6_1-HE 376 chr3R 10185713 10185791 412 495 7 26 78 '16-10 66.88 8.3 2.8 intron CG12814 - chr3R_26_10185001 chr3R_10185001 0.62 KT6_1-HE 377 chr3R 10280130 10280207 blood 7388 5 28 77 '12-16 62.67 7.8 3.2 intron CG43143 + chr3R_28_10280001 chr3R_10280001 0.43 KT6_1-HE 378 chr3R 10423528 10423613 roo 8664 410 28 85 '12-16 65.21 3.8 5.8 intergenic not near genes chr3R_28_10420001 chr3R_10420001 0.43 KT6_1-HE 379 chr3R 10778295 10778378 HMS-Beagle 245 6796 22 83 '9-13 68.29 5.1 3.6 intergenic not near genes chr3R_22_10775001 chr3R_10775001 0.41 KT6_1-HE 380 chr3R 11004046 11004079 297 6580 387 10 33 '8-2 51.84 11.2 0.8 intron CG34114 + chr3R_10_11000001 chr3R_11000001 0.80 KT6_1-HE 381 chr3R 11514989 11515024 G2 2606 2641 19 35 '10-9 63.61 7.8 2.2 intergenic not near genes chr3R_19_11510001 chr3R_11510001 0.53 KT6_1-HE 382 chr3R 11731196 11731281 HMS-Beagle 247 6796 23 85 '14-9 64.16 5.6 3.5 intron CG12594 + chr3R_23_11730001 chr3R_11730001 0.61 KT6_1-HE 383 chr3R 12105288 12105373 Stalker2 404 7247 23 85 '8-15 65.33 3.5 5.1 intron dpr17 + chr3R_23_12105001 chr3R_12105001 0.35 KT6_1-HE 384 chr3R 12115275 12115353 1360 2 3388 36 78 '23-13 66.00 6.8 4.6 intergenic not near genes chr3R_36_12115001 chr3R_12115001 0.64 KT6_1-HE 385 chr3R 12135720 12135797 roo 411 8672 34 77 '25-9 66.15 5.4 5.3 intergenic not near genes chr3R_34_12135001 chr3R_12135001 0.74 KT6_1-HE 386 chr3R 12278598 12278684 I-element 2 5020 17 86 '14-3 65.50 6.7 2.2 intron svp + chr3R_17_12275001 chr3R_12275001 0.82 KT6_1-HE 387 chr3R 13112414 13112501 gypsy5 6939 413 32 87 '17-15 67.68 6.3 4.4 intron timeout + chr3R_32_13110001 chr3R_13110001 0.53 KT6_1-HE 388 chr3R 13230782 13230865 Tirant 8107 402 52 83 '38-14 64.64 14.3 3.4 intron Ace - chr3R_52_13230001 chr3R_13230001 0.73 KT6_1-HE 389 chr3R 13408967 13409048 blood 7013 379 19 81 '5-14 65.70 3.9 3.9 intergenic not near genes chr3R_19_13405001 chr3R_13405001 0.26 KT6_1-HE 390 chr3R 13597770 13597845 pogo 2092 2 10 75 '4-6 65.55 4.3 1.9 intergenic not near genes chr3R_10_13595001 chr3R_13595001 0.40 KT6_1-HE 391 chr3R 13673083 13673164 Tabor 2 7324 30 81 '13-17 61.32 7.4 3.6 intron Task6 - chr3R_30_13670001 chr3R_13670001 0.43 KT6_1-HE 392 chr3R 14046391 14046480 opus 7113 499 13 89 '5-8 68.92 4.3 2.5 intergenic not near genes chr3R_13_14045001 chr3R_14045001 0.38 KT6_1-HE 393 chr3R 14400067 14400093 mdg1 3 7056 10 26 '5-5 61.09 5.2 1.6 intron cv-c - chr3R_10_14400001 chr3R_14400001 0.50 KT6_1-HE 394 chr3R 14563620 14563643 opus 109 19 8 23 '3-5 65.42 15.3 0.5 intergenic not near genes chr3R_8_14560001 chr3R_14560001 0.38 KT6_1-HE 395 chr3R 14597120 14597199 transib2 3 2823 37 79 '20-17 62.12 7.5 4.4 intron stumps + chr3R_37_14595001 chr3R_14595001 0.54 KT6_1-HE 396 chr3R 14805585 14805666 flea 250 4754 15 81 '5-10 67.12 4.8 2.6 3` UTR btsz - chr3R_15_14805001 chr3R_14805001 0.33 KT6_1-HE 397 chr3R 15030624 15030654 jockey 37 7 13 30 '6-7 63.92 6.5 1.7 intergenic not near genes chr3R_13_15030001 chr3R_15030001 0.46 KT6_1-HE 398 chr3R 15129781 15129863 pogo 2099 2 33 82 '12-21 66.66 8.0 3.7 intron CG42788 - chr3R_33_15125001 chr3R_15125001 0.36 KT6_1-HE 399 chr3R 15407569 15407597 I-element 35 7 11 28 '8-3 63.83 4.1 2.2 intergenic CG6125 - chr3R_11_15405001 chr3R_15405001 0.73 KT6_1-HE 400 chr3R 15563011 15563097 blood 379 7010 49 86 '25-24 65.65 14.7 3.1 intergenic not near genes chr3R_49_15560001 chr3R_15560001 0.51 KT6_1-HE 401 chr3R 15773192 15773207 Idefix 3 18 4 15 '2-2 68.09 24.5 0.2 intergenic not near genes chr3R_4_15770001 chr3R_15770001 0.50 KT6_1-HE 402 chr3R 15784771 15784855 297 6580 393 20 84 '15-5 69.78 10.0 1.8 intergenic not near genes chr3R_20_15780001 chr3R_15780001 0.75 KT6_1-HE 403 chr3R 15867815 15867888 copia 9 255 15 73 '5-10 64.47 2.0 5.0 intron CG31183 - chr3R_15_15865001 chr3R_15865001 0.33 KT6_1-HE 404 chr3R 15882602 15882624 jockey 13 35 5 22 '2-3 58.16 9.0 0.5 intergenic not near genes chr3R_5_15880001 chr3R_15880001 0.40 KT6_1-HE 405 chr3R 16004211 16004243 jockey 36 6 11 32 '4-7 65.45 6.3 1.5 intergenic CR42839 -,srp + chr3R_11_16000001 chr3R_16000001 0.36 KT6_1-HE 406 chr3R 16384055 16384231 roo 440 411 39 176 '1-38 67.95 9.8 3.6 exon ss - chr3R_39_16380001 chr3R_16380001 0.03 KT6_1-HE 407 chr3R 16546858 16546940 pogo 2099 2 19 82 '10-9 66.41 10.6 1.6 intron CG42342 + chr3R_19_16545001 chr3R_16545001 0.53 KT6_1-HE 408 chr3R 16996418 16996469 P-element 2816 8 11 51 '7-4 49.55 3.6 2.4 intergenic CG3534 +,CG17556 - chr3R_11_16995001 chr3R_16995001 0.64 KT6_1-HE 409 chr3R 17056069 17056329 hobo 2595 308 11 260 '2-9 66.67 3.2 2.6 intron Dad + chr3R_11_17055001 chr3R_17055001 0.18 KT6_1-HE 410 chr3R 17246183 17246267 412 1 495 40 84 '17-23 63.88 10.8 3.4 intron beat-IIb - chr3R_40_17245001 chr3R_17245001 0.42 KT6_1-HE 411 chr3R 17378321 17378402 pogo 3 2099 20 81 '14-6 69.34 2.5 5.7 intron Brf - chr3R_20_17375001 chr3R_17375001 0.70 KT6_1-HE 412 chr3R 17733267 17733346 INE-1 552 549 9 79 '3-6 72.89 0.1 8.2 intergenic Lgr1 +,CG14321 + chr3R_9_17730001 chr3R_17730001 0.33 KT6_1-HE 413 chr3R 17992040 17992121 McClintock 477 5951 20 81 '1-19 63.70 10.1 1.8 intron cpo + chr3R_20_17990001 chr3R_17990001 0.05 KT6_1-HE 414 chr3R 18098519 18098601 pogo 2 2099 19 82 '7-12 63.34 4.0 3.8 intron sr + chr3R_19_18095001 chr3R_18095001 0.37 KT6_1-HE 415 chr3R 18128443 18128527 pogo 2100 1 22 84 '8-14 67.57 2.5 6.3 intron sr + chr3R_22_18125001 chr3R_18125001 0.36 KT6_1-HE 416 chr3R 18237586 18237650 1360 3386 3378 9 64 '3-6 60.67 2.4 2.6 intron repo + chr3R_9_18235001 chr3R_18235001 0.33 KT6_1-HE 417 chr3R 18657875 18657937 pogo 2 2079 11 62 '6-5 66.98 2.6 3.1 intron CG31224 - chr3R_11_18655001 chr3R_18655001 0.55 KT6_1-HE 418 chr3R 18779150 18779237 roo 8663 412 26 87 '16-10 66.44 5.3 4.1 intron CG7720 - chr3R_26_18775001 chr3R_18775001 0.62 KT6_1-HE 419 chr3R 18917826 18917858 S2 1679 4 7 32 '4-3 76.69 1.1 3.3 intron Xrp1 + chr3R_7_18915001 chr3R_18915001 0.57 KT6_1-HE 420 chr3R 18962222 18962283 hobo 2924 2 28 61 '5-23 63.91 11.6 2.2 intron,intron CG42613 +,CG43732 + chr3R_28_18960001 chr3R_18960001 0.18 KT6_1-HE 421 chr3R 19220124 19220193 hopper 12 1413 13 69 '4-9 62.93 2.6 3.6 intron vib - chr3R_13_19220001 chr3R_19220001 0.31 KT6_1-HE 422 chr3R 19538519 19538742 hobo 3 2614 19 223 '18-1 64.23 5.7 2.8 intron Dys + chr3R_19_19535001 chr3R_19535001 0.95 KT6_1-HE 423 chr3R 19559747 19560037 opus 7032 491 4 290 '1-3 74.67 7.0 0.5 intron Dys + chr3R_4_19555001 chr3R_19555001 0.25 KT6_1-HE 424 chr3R 19946131 19946210 copia 3 256 15 79 '6-9 68.77 5.7 2.2 intron Hs6st - chr3R_15_19945001 chr3R_19945001 0.40 KT6_1-HE 425 chr3R 19970063 19970137 copia 4871 247 22 74 '14-8 64.56 2.8 5.8 intron Hs6st - chr3R_22_19970001 chr3R_19970001 0.64 KT6_1-HE 426 chr3R 20137138 20137341 Burdock 289 254 31 203 '1-30 63.84 9.6 2.9 intergenic not near genes chr3R_31_20135001 chr3R_20135001 0.03 KT6_1-HE 427 chr3R 20147528 20147560 1360 370 402 9 32 '5-4 67.10 20.2 0.4 intergenic not near genes chr3R_9_20145001 chr3R_20145001 0.56 KT6_1-HE 428 chr3R 20147876 20147907 1360 245 276 12 31 '5-7 58.05 9.7 1.1 intergenic not near genes chr3R_12_20145001 chr3R_20145001 0.42 KT6_1-HE 429 chr3R 20149715 20150053 1360 13 3180 25 338 '24-1 65.04 7.3 3.0 intergenic not near genes chr3R_25_20145001 chr3R_20145001 0.96 KT6_1-HE 430 chr3R 20172289 20172369 roo 4 410 34 80 '7-27 65.10 5.4 5.3 intron CG5023 + chr3R_34_20170001 chr3R_20170001 0.21 KT6_1-HE 431 chr3R 20367997 20368271 Max-element 295 8416 29 274 '28-1 64.81 7.0 3.6 intergenic not near genes chr3R_29_20365001 chr3R_20365001 0.97 KT6_1-HE 432 chr3R 20697736 20697756 Burdock 6136 6156 12 20 '6-6 65.05 7.3 1.4 intron Oamb - chr3R_12_20695001 chr3R_20695001 0.50 KT6_1-HE 433 chr3R 21615780 21615851 invader4 1 314 14 71 '7-7 63.83 2.7 3.8 intron InR - chr3R_14_21615001 chr3R_21615001 0.50 KT6_1-HE 434 chr3R 21631415 21631482 1360 1 9 24 67 '16-8 59.16 9.3 2.3 intron E2f - chr3R_24_21630001 chr3R_21630001 0.67 KT6_1-HE 435 chr3R 22231464 22231736 hobo 2938 328 24 272 '23-1 64.38 9.7 2.2 intron SKIP + chr3R_24_22230001 chr3R_22230001 0.96 KT6_1-HE 436 chr3R 22349492 22349550 pogo 2074 1 7 58 '4-3 75.96 3.1 1.7 intergenic not near genes chr3R_7_22345001 chr3R_22345001 0.57 KT6_1-HE 437 chr3R 22513314 22513397 412 495 2 30 83 '13-17 65.54 6.1 4.2 intron Octbeta1R + chr3R_30_22510001 chr3R_22510001 0.43 KT6_1-HE 438 chr3R 22694262 22694341 pogo 5 2099 12 79 '6-6 69.08 4.1 2.4 exon Nup133 + chr3R_12_22690001 chr3R_22690001 0.50 KT6_1-HE 439 chr3R 22777507 22777575 pogo 10 2093 9 68 '5-4 70.91 4.5 1.6 intron CG7029 + chr3R_9_22775001 chr3R_22775001 0.56 KT6_1-HE 440 chr3R 23162204 23162280 1731 4623 2 17 76 '11-6 62.84 7.0 2.1 intergenic not near genes chr3R_17_23160001 chr3R_23160001 0.65 KT6_1-HE 441 chr3R 23669752 23669990 P-element 2769 2862 11 238 '1-10 54.37 3.6 2.4 intergenic CG31145 - chr3R_11_23665001 chr3R_23665001 0.09 KT6_1-HE 442 chr3R 24203675 24203717 copia 12 244 9 42 '3-6 64.07 2.1 2.9 intron twin - chr3R_9_24200001 chr3R_24200001 0.33 KT6_1-HE 443 chr3R 24395015 24395084 412 15 494 25 69 '11-14 66.71 4.7 4.4 3` UTR nAChRalpha1 - chr3R_25_24395001 chr3R_24395001 0.44 KT6_1-HE 444 chr3R 24409191 24409270 roo 405 8664 30 79 '21-9 67.69 6.9 3.8 intron nAChRalpha1 - chr3R_30_24405001 chr3R_24405001 0.70 KT6_1-HE 445 chr3R 24791751 24791822 blood 7011 7377 15 71 '9-6 63.33 5.1 2.5 intron Ets96B + chr3R_15_24790001 chr3R_24790001 0.60 KT6_1-HE 446 chr3R 25194596 25194680 rover 348 6952 27 84 '12-15 66.57 5.9 3.9 intergenic not near genes chr3R_27_25190001 chr3R_25190001 0.44 KT6_1-HE 447 chr3R 25751171 25751232 roo 407 8684 22 61 '18-4 65.68 7.9 2.5 intron LpR1 - chr3R_22_25750001 chr3R_25750001 0.82 KT6_1-HE 448 chr3R 25755487 25755547 pogo 2081 6 4 60 '2-2 67.44 4.0 0.8 intron LpR1 - chr3R_4_25755001 chr3R_25755001 0.50 KT6_1-HE 449 chr3R 25774665 25774754 blood 7007 379 32 89 '22-10 64.89 11.7 2.5 exon,5` UTR CG17197 -,CG17198 - chr3R_32_25770001 chr3R_25770001 0.69 KT6_1-HE 450 chr3R 25912835 25912908 pogo 2090 2 14 73 '2-12 64.85 4.4 2.6 intron CG42235 + chr3R_14_25910001 chr3R_25910001 0.14 KT6_1-HE 451 chr3R 26036874 26036944 P-element 2 2880 30 70 '15-15 51.14 8.2 3.3 intergenic E(spl)m7-HLH + chr3R_30_26035001 chr3R_26035001 0.50 KT6_1-HE 452 chr3R 26287198 26287486 HMS-Beagle 6658 6794 24 288 '1-23 66.45 5.2 3.9 intergenic not near genes chr3R_24_26285001 chr3R_26285001 0.04 KT6_1-HE 453 chr3R 26292119 26292203 pogo 2100 1 10 84 '6-4 68.16 6.3 1.4 intergenic not near genes chr3R_10_26290001 chr3R_26290001 0.60 KT6_1-HE 454 chr3R 26507240 26507272 F-element 7 38 21 32 '16-5 57.72 20.2 1.0 intron plum - chr3R_21_26505001 chr3R_26505001 0.76 KT6_1-HE 455 chr3R 26647502 26647570 I-element 3 5349 24 68 '19-5 60.44 8.2 2.6 3` UTR beat-VII - chr3R_24_26645001 chr3R_26645001 0.79 KT6_1-HE 456 chr3R 26730603 26730679 412 7 493 24 76 '9-15 61.42 7.0 3.0 intergenic CG14246 + chr3R_24_26730001 chr3R_26730001 0.38 KT6_1-HE 457 chr3R 26782393 26782479 Burdock 6136 257 12 86 '5-7 65.42 4.5 2.2 intergenic not near genes chr3R_12_26780001 chr3R_26780001 0.42 KT6_1-HE 458 chr3R 27135880 27135947 FB 11 1 5 67 '3-2 67.11 2.2 1.6 intron CG6051 - chr3R_5_27135001 chr3R_27135001 0.60 KT6_1-HE 459 chr3R 27222682 27222870 P-element 9 2672 19 188 '18-1 50.94 5.5 2.9 intergenic not near genes chr3R_19_27220001 chr3R_27220001 0.95 KT6_1-HE 460 chr3R 27634083 27634152 pogo 2098 14 16 69 '10-6 67.46 4.6 2.9 3` UTR Tusp + chr3R_16_27630001 chr3R_27630001 0.62 KT6_1-HE 461 chr3R 27796402 27796463 jockey 4985 4667 16 61 '6-10 59.60 6.4 2.2 intron CG34353 - chr3R_16_27795001 chr3R_27795001 0.38 KT6_1-HE 462 chr3R 27890161 27890240 springer 5 7521 24 79 '10-14 64.71 5.9 3.5 intron CG34353 - chr3R_24_27890001 chr3R_27890001 0.42 KT6_1-HE 463 chr3R 28066456 28066533 Burdock 249 6137 20 77 '5-15 67.26 6.4 2.7 intron CG34362 + chr3R_20_28065001 chr3R_28065001 0.25 KT6_1-HE 464 chr3R 28074358 28074440 roo 408 1 46 82 '32-14 65.14 9.0 4.6 intron CG34362 + chr3R_46_28070001 chr3R_28070001 0.70 KT6_1-HE 465 chr3R 28099521 28099604 412 1 494 34 83 '18-16 64.27 9.3 3.3 intergenic not near genes chr3R_34_28095001 chr3R_28095001 0.53 KT6_1-HE 466 chr3R 28435037 28435220 hobo 1 419 30 183 '26-4 66.98 8.7 3.1 intron beat-VI + chr3R_30_28435001 chr3R_28435001 0.87 KT6_1-HE 467 chr3R 28771493 28771566 hobo 2937 4 14 73 '5-9 63.66 6.6 1.8 intergenic not near genes chr3R_14_28770001 chr3R_28770001 0.36 KT6_1-HE 468 chr3R 28971087 28971134 Ivk 5356 2 24 47 '6-18 61.32 8.1 2.6 5` UTR CR45669 + chr3R_24_28970001 chr3R_28970001 0.25 KT6_1-HE 469 chr3R 29207539 29207571 copia 4869 32 6 32 '5-1 66.79 1.9 2.1 intergenic not near genes chr3R_6_29205001 chr3R_29205001 0.83 KT6_1-HE 470 chr3R 29325735 29325791 roo 9043 8661 17 56 '5-12 68.08 5.3 2.7 intergenic not near genes chr3R_17_29325001 chr3R_29325001 0.29 KT6_1-HE 471 chr3R 29475698 29475732 hobo 2708 2908 4 34 '1-3 69.52 2.9 1.0 intron Ptp99A + chr3R_4_29475001 chr3R_29475001 0.25 KT6_1-HE 472 chr3R 31457951 31458022 jockey 4986 2 16 71 '4-12 61.80 4.5 2.9 intergenic Gprk2 +,lox - chr3R_16_31455001 chr3R_31455001 0.25 KT6_1-HE 473 chr3R 31964260 31964328 FB 9 2 11 68 '9-2 61.79 3.5 2.4 intron heph - chr3R_11_31960001 chr3R_31960001 0.82 KT6_1-HE 474 chr3R 31986912 31986991 P-element 4 2881 29 79 '17-12 48.07 6.0 4.1 intron,intron heph -,CG2003 + chr3R_29_31985001 chr3R_31985001 0.59 KT6_1-HE 475 chr4 372963 373042 pogo 2100 6 11 79 '5-6 68.18 2.6 3.1 3` UTR Hcf + chr4_11_370001 chr4_370001 0.45 KT6_1-HE 476 chr4 1028425 1028441 Juan 14 5 6 16 '4-2 57.38 2.7 1.6 intron CR44031 + chr4_6_1025001 chr4_1025001 0.67 KT6_1-HE 477 chr4 1156473 1156557 flea 4757 257 6 84 '4-2 69.44 5.6 0.9 intron,intron CG32017 -,Kif3C + chr4_6_1155001 chr4_1155001 0.67 KT6_1-HE 478 chrX 407385 407467 pogo 2098 2 16 82 '9-7 65.47 4.4 3.0 intron CG32816 - chrX_16_405001 chrX_405001 0.56 KT6_1-HE 479 chrX 494725 494797 hobo 2936 5 12 72 '4-8 65.42 1.4 5.0 intron CG17778 + chrX_12_490001 chrX_490001 0.33 KT6_1-HE 480 chrX 693250 693320 FB 7 2 8 70 '5-3 65.13 2.9 2.1 intron sdk + chrX_8_690001 chrX_690001 0.62 KT6_1-HE 481 chrX 865815 865895 mdg1 417 7037 25 80 '13-12 64.90 4.4 4.6 intron CG43867 - chrX_25_865001 chrX_865001 0.52 KT6_1-HE 482 chrX 1055177 1055251 copia 249 1 26 74 '6-20 62.66 3.2 6.2 intron CR44779 + chrX_26_1055001 chrX_1055001 0.23 KT6_1-HE 483 chrX 1102976 1103054 Bari1 29 1701 4 78 '3-1 65.13 8.0 0.4 intron CG3655 - chrX_4_1100001 chrX_1100001 0.75 KT6_1-HE 484 chrX 1119628 1119684 297 6608 6974 8 56 '4-4 72.27 5.9 1.2 intron CG3655 - chrX_8_1115001 chrX_1115001 0.50 KT6_1-HE 485 chrX 1317715 1317784 blood 7388 13 16 69 '8-8 63.37 5.5 2.5 intron DAAM - chrX_16_1315001 chrX_1315001 0.50 KT6_1-HE 486 chrX 1532528 1532558 Doc 2 32 12 30 '6-6 61.25 6.5 1.6 intergenic not near genes chrX_12_1530001 chrX_1530001 0.50 KT6_1-HE 487 chrX 1599384 1599447 hopper 1406 1414 6 63 '2-4 68.15 3.0 1.5 intron,intron Mur2B -,br + chrX_6_1595001 chrX_1595001 0.33 KT6_1-HE 488 chrX 1734168 1734196 hobo 30 2 22 28 '12-10 65.11 4.1 4.3 intergenic not near genes chrX_22_1730001 chrX_1730001 0.55 KT6_1-HE 489 chrX 2296985 2297068 S-element 1 2 8 83 '6-2 65.46 0.7 4.7 intron phl + chrX_8_2295001 chrX_2295001 0.75 KT6_1-HE 490 chrX 2938203 2938520 Stalker2 7622 7649 13 317 '12-1 65.89 2.0 4.3 intron kirre + chrX_13_2935001 chrX_2935001 0.92 KT6_1-HE 491 chrX 3393795 3393869 opus 1 499 4 74 '1-3 67.06 4.6 0.7 intron,intron CR44999 +,CG12535 - chrX_4_3390001 chrX_3390001 0.25 KT6_1-HE 492 chrX 3629497 3629573 Quasimodo 7 7366 7 76 '2-5 67.41 11.7 0.6 intron AstA-R1 + chrX_7_3625001 chrX_3625001 0.29 KT6_1-HE 493 chrX 3694752 3694843 Tirant 403 8106 32 91 '13-19 66.71 9.6 3.0 intron Mnt + chrX_32_3690001 chrX_3690001 0.41 KT6_1-HE 494 chrX 4234387 4234471 roo 409 8663 28 84 '13-15 69.42 2.9 7.2 intergenic not near genes chrX_28_4230001 chrX_4230001 0.46 KT6_1-HE 495 chrX 4310941 4311023 HMS-Beagle 246 6794 17 82 '10-7 67.88 5.7 2.5 intergenic CG15579 - chrX_17_4310001 chrX_4310001 0.59 KT6_1-HE 496 chrX 4722960 4722989 jockey 4775 4746 12 29 '3-9 61.24 8.1 1.3 intron Proc-R + chrX_12_4720001 chrX_4720001 0.25 KT6_1-HE 497 chrX 4789130 4789195 297 6582 6969 10 65 '9-1 64.61 11.6 0.8 intergenic not near genes chrX_10_4785001 chrX_4785001 0.90 KT6_1-HE 498 chrX 4869414 4869479 Quasimodo 7364 5 9 65 '2-7 65.01 6.3 1.2 intron CG42594 + chrX_9_4865001 chrX_4865001 0.22 KT6_1-HE 499 chrX 6097372 6097449 transib2 2821 3 9 77 '7-2 63.34 6.4 1.2 intron Nep1 + chrX_9_6095001 chrX_6095001 0.78 KT6_1-HE 500 chrX 6306781 6306857 412 9 495 14 76 '1-13 61.21 3.8 2.9 intergenic CG3823 + chrX_14_6305001 chrX_6305001 0.07 KT6_1-HE 501 chrX 6439027 6439115 HMS-Beagle 248 6794 38 88 '17-21 65.67 5.5 5.8 intron CG42340 - chrX_38_6435001 chrX_6435001 0.45 KT6_1-HE 502 chrX 7042988 7043073 roo 410 8664 41 85 '31-10 65.90 8.6 4.3 intron CG12541 - chrX_41_7040001 chrX_7040001 0.76 KT6_1-HE 503 chrX 7118654 7118671 Transib-N1_DM 51 24 4 17 '3-1 81.25 2.2 1.2 intergenic not near genes chrX_4_7115001 chrX_7115001 0.75 KT6_1-HE 504 chrX 8598391 8598456 pogo 15 2096 8 65 '4-4 72.62 3.9 1.6 intron Crag + chrX_8_8595001 chrX_8595001 0.50 KT6_1-HE 505 chrX 8795272 8795379 gypsy7 5004 5006 6 107 '4-2 76.57 8.5 0.6 intron Lim1 - chrX_6_8795001 chrX_8795001 0.67 KT6_1-HE 506 chrX 9435298 9435391 Transpac 4918 5223 26 93 '19-7 65.72 6.5 3.5 intron mgl - chrX_26_9435001 chrX_9435001 0.73 KT6_1-HE 507 chrX 9523265 9523293 opus 138 110 15 28 '7-8 67.46 9.4 1.4 intron CG32700 - chrX_15_9520001 chrX_9520001 0.47 KT6_1-HE 508 chrX 9530240 9530259 jockey 4957 4938 4 19 '3-1 55.92 0.4 2.9 intron CG32700 - chrX_4_9530001 chrX_9530001 0.75 KT6_1-HE 509 chrX 9702778 9702800 I-element 5350 5325 4 22 '1-3 60.53 2.7 1.1 intergenic not near genes chrX_4_9700001 chrX_9700001 0.25 KT6_1-HE 510 chrX 9889260 9889288 jockey 6 32 11 28 '5-6 60.50 14.1 0.7 intron CG15249 - chrX_11_9885001 chrX_9885001 0.45 KT6_1-HE 511 chrX 10165491 10165566 hopper 1411 1411 18 75 '11-7 66.96 7.3 2.2 intron,intron CR44894 -,CG43902 + chrX_18_10165001 chrX_10165001 0.61 KT6_1-HE 512 chrX 10988295 10988371 opus 7 499 7 76 '2-5 67.16 3.5 1.6 intron CG42339 - chrX_7_10985001 chrX_10985001 0.29 KT6_1-HE 513 chrX 12074343 12074398 pogo 11 2081 12 55 '7-5 68.95 6.2 1.7 intron,intron CR43960 +,Ten-a + chrX_12_12070001 chrX_12070001 0.58 KT6_1-HE 514 chrX 12099660 12099736 hobo 2 2709 19 76 '17-2 66.00 7.0 2.4 intron,intron CR43960 +,Ten-a + chrX_19_12095001 chrX_12095001 0.89 KT6_1-HE 515 chrX 12202514 12202567 hopper 1413 28 12 53 '7-5 67.80 3.2 2.9 intron Ten-a + chrX_12_12200001 chrX_12200001 0.58 KT6_1-HE 516 chrX 12571612 12571697 copia 4868 257 15 85 '7-8 66.27 3.3 3.5 3` UTR CG11138 - chrX_15_12570001 chrX_12570001 0.47 KT6_1-HE 517 chrX 12788398 12788480 roo 8664 409 22 82 '8-14 67.40 5.0 3.7 3` UTR Pde9 - chrX_22_12785001 chrX_12785001 0.36 KT6_1-HE 518 chrX 12836625 12836660 jockey 4977 4776 12 35 '4-8 59.37 4.7 2.1 intron Pde9 - chrX_12_12835001 chrX_12835001 0.33 KT6_1-HE 519 chrX 13009097 13009179 roo 405 8661 24 82 '13-11 67.26 4.0 4.8 intron rad + chrX_24_13005001 chrX_13005001 0.54 KT6_1-HE 520 chrX 13552294 13552311 roo 8680 8663 6 17 '3-3 63.16 3.8 1.2 intergenic CG11816 - chrX_6_13550001 chrX_13550001 0.50 KT6_1-HE 521 chrX 14642231 14642294 hopper 1409 14 16 63 '9-7 65.75 4.0 3.2 intron NetA - chrX_16_14640001 chrX_14640001 0.56 KT6_1-HE 522 chrX 14840773 14840793 jockey 4793 4773 5 20 '3-2 63.16 5.2 0.8 intron Flo2 + chrX_5_14840001 chrX_14840001 0.60 KT6_1-HE 523 chrX 15172473 15172555 Bari1 3 1706 17 82 '8-9 62.02 7.1 2.1 intergenic not near genes chrX_17_15170001 chrX_15170001 0.47 KT6_1-HE 524 chrX 16727020 16727141 jockey2 3353 3385 6 121 '4-2 82.45 2.0 2.0 intergenic CG32572 +,CG9634 - chrX_6_16725001 chrX_16725001 0.67 KT6_1-HE 525 chrX 16944259 16944337 Burdock 249 6136 9 78 '3-6 65.74 2.2 2.8 intron RhoGAP15B + chrX_9_16940001 chrX_16940001 0.33 KT6_1-HE 526 chrX 16994287 16994318 412 7086 2 22 31 '17-5 63.29 6.7 2.9 intron CG45002 - chrX_22_16990001 chrX_16990001 0.77 KT6_1-HE 527 chrX 17063506 17063586 17.6 492 4 8 80 '3-5 65.62 5.5 1.2 intron CG45002 - chrX_8_17060001 chrX_17060001 0.38 KT6_1-HE 528 chrX 17165279 17165363 Bari1 1706 2 29 84 '18-11 64.86 2.9 7.4 intron baz + chrX_29_17165001 chrX_17165001 0.62 KT6_1-HE 529 chrX 17193092 17193173 Bari1 5 1706 33 81 '11-22 65.57 5.9 4.8 intron baz + chrX_33_17190001 chrX_17190001 0.33 KT6_1-HE 530 chrX 17326160 17326237 roo 8671 410 46 77 '19-27 66.28 5.2 7.4 intergenic not near genes chrX_46_17325001 chrX_17325001 0.41 KT6_1-HE 531 chrX 17855747 17855772 BS 5016 4991 8 25 '3-5 63.16 1.6 3.1 intron CG32557 - chrX_8_17855001 chrX_17855001 0.38 KT6_1-HE 532 chrX 18119130 18119197 Tirant 395 15 41 67 '13-28 61.20 6.3 5.6 intergenic not near genes chrX_41_18115001 chrX_18115001 0.32 KT6_1-HE 533 chrX 18239336 18239411 jockey 4987 14 15 75 '3-12 54.69 6.6 2.0 intergenic not near genes chrX_15_18235001 chrX_18235001 0.20 KT6_1-HE 534 chrX 18334635 18334719 roo 8667 414 44 84 '6-38 69.14 8.3 4.7 intron CG6123 - chrX_44_18330001 chrX_18330001 0.14 KT6_1-HE 535 chrX 18492643 18492825 I-element 5325 37 19 182 '4-15 60.39 6.5 2.5 intergenic not near genes chrX_19_18490001 chrX_18490001 0.21 KT6_1-HE 536 chrX 19114341 19114421 roo 9069 8664 27 80 '15-12 64.48 4.4 5.0 intergenic not near genes chrX_27_19110001 chrX_19110001 0.56 KT6_1-HE 537 chrX 19301726 19301805 pogo 1 2099 28 79 '17-11 65.00 5.1 4.6 intron,intron CG8051 -,snmRNA:763 - chrX_28_19300001 chrX_19300001 0.61 KT6_1-HE 538 chrX 19459569 19459648 hopper 1414 1412 31 79 '24-7 67.84 6.9 3.9 intron kek5 + chrX_31_19455001 chrX_19455001 0.77 KT6_1-HE 539 chrX 19607342 19607415 pogo 2097 9 6 73 '2-4 66.67 2.0 2.0 intron CG14207 + chrX_6_19605001 chrX_19605001 0.33 KT6_1-HE 540 chrX 19973553 19973863 blood 383 381 34 310 '1-33 68.03 6.3 4.7 intergenic not near genes chrX_34_19970001 chrX_19970001 0.03 KT6_1-HE 541 chrX 20074925 20075004 mdg3 249 5250 26 79 '7-19 64.07 4.9 4.4 intergenic not near genes chrX_26_20070001 chrX_20070001 0.27 KT6_1-HE 542 chrX 20360985 20361044 invader3 251 5185 17 59 '4-13 58.86 9.3 1.7 intergenic not near genes chrX_17_20360001 chrX_20360001 0.24 KT6_1-HE 543 chrX 20394183 20394257 invader1 256 3862 4 74 '3-1 52.63 0.6 2.5 intergenic HERC2 +,Syx16 - chrX_4_20390001 chrX_20390001 0.75 KT6_1-HE 544 chrX 20975753 20975834 copia 1 255 23 81 '16-7 64.71 7.2 2.8 intergenic not near genes chrX_23_20975001 chrX_20975001 0.70 KT6_1-HE 545 chrX 20999460 20999577 BS 4885 1 26 117 '1-25 63.97 6.0 3.7 intergenic not near genes chrX_26_20995001 chrX_20995001 0.04 KT6_1-HE 546 chrX 21087767 21087867 Transpac 308 309 23 100 '14-9 64.92 7.1 2.8 intergenic not near genes chrX_23_21085001 chrX_21085001 0.61 KT6_1-HE 547 chrX 21177073 21177178 P-element 2872 2877 11 105 '6-5 51.98 3.2 2.6 intergenic not near genes chrX_11_21175001 chrX_21175001 0.55 KT6_1-HE 548 chrX 21204994 21205101 1360 3380 201 14 107 '9-5 68.28 2.7 3.8 intergenic CG32521 - chrX_14_21200001 chrX_21200001 0.64 KT6_1-HE 549 chrX 21232193 21232481 mdg3 5130 234 42 288 '1-41 61.62 11.2 3.4 intron CG32521 - chrX_42_21230001 chrX_21230001 0.02 KT6_1-HE 550 chrX 21245188 21245268 diver 2 224 24 80 '14-10 62.83 7.3 2.9 intron CG32521 - chrX_24_21245001 chrX_21245001 0.58 KT6_1-HE 551 chrX 21639493 21639561 412 7534 3 20 68 '4-16 61.25 4.0 4.0 intergenic not near genes chrX_20_21635001 chrX_21635001 0.20 KT6_1-HE 552 chrX 21667901 21667933 gypsy2 6523 3 31 32 '18-13 66.70 4.4 5.7 intergenic not near genes chrX_31_21665001 chrX_21665001 0.58 KT6_1-HE 553 chrX 21907788 21907820 accord 7230 352 5 32 '3-2 70.79 0.0 5.0 intergenic not near genes chrX_5_21905001 chrX_21905001 0.60 KT6_1-HE 554 chrX 21907821 21907837 mdg1 420 7442 4 16 '1-3 54.93 0.0 4.0 intergenic not near genes chrX_4_21905001 chrX_21905001 0.25 KT6_1-HE 555 chrX 21933146 21933207 blood 7366 7010 36 61 '13-23 65.38 0.0 36.0 intergenic not near genes chrX_36_21930001 chrX_21930001 0.36 KT6_1-HE 556 chrX 22093348 22093370 Tabor 7315 7291 7 22 '2-5 64.63 0.0 7.0 intergenic not near genes chrX_7_22090001 chrX_22090001 0.29 KT6_1-HE 557 chrX 22218809 22218857 Juan 4208 18 7 48 '2-5 62.97 0.0 7.0 intergenic not near genes chrX_7_22215001 chrX_22215001 0.29 KT6_1-HE 558 chrX 22575287 22575315 jockey 9 37 16 28 '9-7 62.50 12.4 1.2 intergenic not near genes chrX_16_22575001 chrX_22575001 0.56 KT6_1-HE 559 chrY 424999 425019 McClintock 6419 447 4 20 '2-2 67.17 0.0 4.0 intergenic not near genes chrY_4_420001 chrY_420001 0.50 KT6_1-HE