SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 47457 47491 chr2L 52563 52597 jockey 28 5106 8.5 12.5 10.5 2.4 5140 chr2L 47457 intron Cda5 - chr2L 50027 intron Cda5 - chr2L 52597 intron Cda5 - chr2L_28_50001 chr2L_50001 KN35_1-HE 2 chr2L 134859 134865 chr2L 134948 134954 8 89 12.0 4.5 8.2 0.9 95 chr2L 134859 intron CG11455 + chr2L 134906 intron CG11455 + chr2L 134954 intron CG11455 + chr2L_8_130001 chr2L_130001 KN35_1-HE 3 chr2L 172057 172089 chr2L 172139 172171 22 80 4.0 2.5 3.2 5.2 114 chr2L 172057 intron spen + chr2L 172114 intron spen + chr2L 172171 intron spen + chr2L_22_170001 chr2L_170001 KN35_1-HE 4 chr2L 263298 263318 chr2L 263445 263465 8 147 1.5 1.0 1.2 3.6 167 chr2L 263298 intron,3` UTR CG3645 -,CG17075 - chr2L 263382 intron,3` UTR CG3645 -,CG17075 - chr2L 263465 intron,3` UTR CG3645 -,CG17075 - chr2L_8_260001 chr2L_260001 KN35_1-HE 5 chr2L 324989 325150 chr2L 325098 325219 14 79 3.0 18.5 10.8 1.2 230 chr2L 324989 intron Plc21C + chr2L 325104 intron Plc21C + chr2L 325219 intron Plc21C + chr2L_14_325001 chr2L_325001 KN35_1-HE 6 chr2L 325891 325928 chr2L 325969 326006 15 78 4.0 5.0 4.5 2.7 115 chr2L 325891 intron,exon Plc21C +,CG43755 - chr2L 325948 intron,exon Plc21C +,CG43755 - chr2L 326006 intron,exon Plc21C +,CG43755 - chr2L_15_325001 chr2L_325001 KN35_1-HE 7 chr2L 347890 347914 chr2L 355391 355415 blood 11 7501 5.0 3.0 4.0 2.2 7525 chr2L 347890 3` UTR Plc21C + chr2L 351652 intron Plc21C + chr2L 355415 3` UTR Plc21C + chr2L_11_350001 chr2L_350001 KN35_1-HE 8 chr2L 371450 371458 chr2L 371529 371538 5 80 3.5 10.0 6.8 0.6 88 chr2L 371450 intergenic not near genes chr2L 371494 intergenic not near genes chr2L 371538 intergenic not near genes chr2L_5_370001 chr2L_370001 KN35_1-HE 9 chr2L 391119 391143 chr2L 391212 391236 9 93 6.0 4.0 5.0 1.5 117 chr2L 391119 intergenic not near genes chr2L 391178 intergenic not near genes chr2L 391236 intergenic not near genes chr2L_9_390001 chr2L_390001 KN35_1-HE 10 chr2L 394192 394218 chr2L 394314 394340 14 122 3.0 2.5 2.8 3.7 148 chr2L 394192 intergenic not near genes chr2L 394266 intergenic not near genes chr2L 394340 intergenic not near genes chr2L_14_390001 chr2L_390001 KN35_1-HE 11 chr2L 519105 519139 chr2L 519202 519234 12 97 3.0 2.0 2.5 3.4 129 chr2L 519105 intron ush + chr2L 519170 intron ush + chr2L 519234 intron ush + chr2L_12_515001 chr2L_515001 KN35_1-HE 12 chr2L 544827 544860 chr2L 544911 544944 7 84 1.0 2.5 1.8 2.5 117 chr2L 544827 intergenic Ets21C -,Spp -,nAChRbeta3 + chr2L 544886 intergenic Ets21C -,Spp -,nAChRbeta3 + chr2L 544944 3` UTR Ets21C - chr2L_7_540001 chr2L_540001 KN35_1-HE 13 chr2L 617354 617370 chr2L 617432 617448 13 78 4.5 0.0 2.2 4.1 94 chr2L 617354 intergenic not near genes chr2L 617401 intergenic not near genes chr2L 617448 intergenic not near genes chr2L_13_615001 chr2L_615001 KN35_1-HE 14 chr2L 630328 630334 chr2L 630418 630427 6 92 2.5 6.5 4.5 1.1 99 chr2L 630328 intergenic not near genes chr2L 630378 intergenic not near genes chr2L 630427 intergenic not near genes chr2L_6_630001 chr2L_630001 KN35_1-HE 15 chr2L 680751 680756 chr2L 680908 680913 4 157 0.5 8.0 4.2 0.8 162 chr2L 680751 intron ds - chr2L 680832 intron ds - chr2L 680913 intron ds - chr2L_4_680001 chr2L_680001 KN35_1-HE 16 chr2L 686915 686949 chr2L 695956 695990 roo 12 9041 2.5 2.0 2.2 3.8 9075 chr2L 686915 intron ds - chr2L 691452 intron ds - chr2L 695990 intron ds - chr2L_12_690001 chr2L_690001 KN35_1-HE 17 chr2L 749600 749630 chr2L 749685 749717 9 87 6.5 6.5 6.5 1.2 117 chr2L 749600 intergenic GABA-B-R3 + chr2L 749658 intergenic GABA-B-R3 + chr2L 749717 intergenic GABA-B-R3 + chr2L_9_745001 chr2L_745001 KN35_1-HE 18 chr2L 764562 764590 chr2L 764644 764672 12 82 2.5 1.5 2.0 4.0 110 chr2L 764562 intergenic not near genes chr2L 764617 intergenic not near genes chr2L 764672 intergenic not near genes chr2L_12_760001 chr2L_760001 KN35_1-HE 19 chr2L 770462 770493 chr2L 772244 772275 Bari1 13 1782 2.5 3.5 3.0 3.2 1813 chr2L 770462 intergenic not near genes chr2L 771368 intergenic not near genes chr2L 772275 intergenic CR44614 + chr2L_13_770001 chr2L_770001 KN35_1-HE 20 chr2L 773497 773530 chr2L 773584 773617 14 87 1.0 9.0 5.0 2.3 120 chr2L 773497 intergenic CG12506 +,CR44614 + chr2L 773557 5` UTR CG12506 + chr2L 773617 exon CG12506 + chr2L_14_770001 chr2L_770001 KN35_1-HE 21 chr2L 775820 775853 chr2L 775923 775953 18 103 2.0 2.5 2.2 5.6 133 chr2L 775820 intergenic not near genes chr2L 775886 intergenic not near genes chr2L 775953 intergenic not near genes chr2L_18_775001 chr2L_775001 KN35_1-HE 22 chr2L 791445 791481 chr2L 791540 791576 19 95 3.5 1.5 2.5 5.4 131 chr2L 791445 intergenic not near genes chr2L 791510 intergenic not near genes chr2L 791576 intergenic not near genes chr2L_19_790001 chr2L_790001 KN35_1-HE 23 chr2L 803521 803553 chr2L 803858 803890 20 337 7.5 8.0 7.8 2.3 369 chr2L 803521 intergenic not near genes chr2L 803706 intergenic not near genes chr2L 803890 intergenic not near genes chr2L_20_800001 chr2L_800001 KN35_1-HE 24 chr2L 922463 922495 chr2L 922545 922577 8 82 7.0 3.5 5.2 1.3 114 chr2L 922463 intergenic CG4341 + chr2L 922520 intergenic CG4341 + chr2L 922577 intergenic CG4341 + chr2L_8_920001 chr2L_920001 KN35_1-HE 25 chr2L 928831 928858 chr2L 928909 928936 5 78 2.0 8.5 5.2 0.8 105 chr2L 928831 intron CG4341 + chr2L 928884 intron CG4341 + chr2L 928936 intron CG4341 + chr2L_5_925001 chr2L_925001 KN35_1-HE 26 chr2L 931631 931663 chr2L 931711 931743 9 80 2.5 5.0 3.8 1.9 112 chr2L 931631 intron CG4341 + chr2L 931687 intron CG4341 + chr2L 931743 intron CG4341 + chr2L_9_930001 chr2L_930001 KN35_1-HE 27 chr2L 950314 950339 chr2L 950400 950425 15 86 4.5 8.0 6.2 2.1 111 chr2L 950314 intron CG4341 + chr2L 950370 intron CG4341 + chr2L 950425 intron CG4341 + chr2L_15_950001 chr2L_950001 KN35_1-HE 28 chr2L 967147 967185 chr2L 967507 967545 13 358 2.0 7.0 4.5 2.4 398 chr2L 967147 intergenic not near genes chr2L 967346 intergenic not near genes chr2L 967545 intergenic not near genes chr2L_13_965001 chr2L_965001 KN35_1-HE 29 chr2L 976881 976908 chr2L 984518 984545 roo 17 7637 0.5 3.0 1.8 6.1 7664 chr2L 976881 intergenic not near genes chr2L 980713 intergenic not near genes chr2L 984545 intergenic not near genes chr2L_17_980001 chr2L_980001 KN35_1-HE 30 chr2L 1042617 1042625 chr2L 1042695 1042703 4 78 0.0 0.0 0.0 4.0 86 chr2L 1042617 intron IA-2 - chr2L 1042660 intron IA-2 - chr2L 1042703 intron IA-2 - chr2L_4_1040001 chr2L_1040001 KN35_1-HE 31 chr2L 1045410 1045441 chr2L 1045491 1045522 9 81 2.0 2.0 2.0 3.0 112 chr2L 1045410 intron IA-2 - chr2L 1045466 intron IA-2 - chr2L 1045522 intron IA-2 - chr2L_9_1045001 chr2L_1045001 KN35_1-HE 32 chr2L 1220128 1220162 chr2L 1227595 1227629 blood 25 7467 6.0 5.5 5.8 3.7 7501 chr2L 1220128 intron CG42329 + chr2L 1223878 intron CG42329 + chr2L 1227629 intron CG42329 + chr2L_25_1220001 chr2L_1220001 KN35_1-HE 33 chr2L 1237494 1237529 chr2L 1237607 1237631 16 106 5.5 1.0 3.2 3.8 137 chr2L 1237494 intergenic not near genes chr2L 1237562 intergenic not near genes chr2L 1237631 intergenic not near genes chr2L_16_1235001 chr2L_1235001 KN35_1-HE 34 chr2L 1237983 1238004 chr2L 1238068 1238089 18 85 9.0 5.0 7.0 2.2 106 chr2L 1237983 intergenic not near genes chr2L 1238036 intergenic not near genes chr2L 1238089 intergenic not near genes chr2L_18_1235001 chr2L_1235001 KN35_1-HE 35 chr2L 1301751 1301785 chr2L 1302289 1302325 gypsy 7 539 0.0 9.5 4.8 1.2 574 chr2L 1301751 intergenic not near genes chr2L 1302038 intergenic not near genes chr2L 1302325 intergenic not near genes chr2L_7_1300001 chr2L_1300001 KN35_1-HE 36 chr2L 1312869 1312902 chr2L 1312957 1312990 12 86 7.0 7.5 7.2 1.5 121 chr2L 1312869 intergenic not near genes chr2L 1312930 intergenic not near genes chr2L 1312990 intergenic not near genes chr2L_12_1310001 chr2L_1310001 KN35_1-HE 37 chr2L 1327179 1327210 chr2L 1327580 1327611 18 401 5.0 5.0 5.0 3.0 432 chr2L 1327179 intergenic not near genes chr2L 1327395 intergenic not near genes chr2L 1327611 intergenic not near genes chr2L_18_1325001 chr2L_1325001 KN35_1-HE 38 chr2L 1375354 1375363 chr2L 1375437 1375446 4 83 4.0 11.0 7.5 0.5 92 chr2L 1375354 intergenic not near genes chr2L 1375400 intergenic not near genes chr2L 1375446 intergenic not near genes chr2L_4_1375001 chr2L_1375001 KN35_1-HE 39 chr2L 1475097 1475129 chr2L 1475229 1475262 9 133 0.0 2.0 1.0 4.5 165 chr2L 1475097 intergenic not near genes chr2L 1475180 intergenic not near genes chr2L 1475262 intergenic not near genes chr2L_9_1475001 chr2L_1475001 KN35_1-HE 40 chr2L 1486870 1486903 chr2L 1486948 1486981 7 78 1.5 2.5 2.0 2.3 111 chr2L 1486870 intergenic not near genes chr2L 1486926 intergenic not near genes chr2L 1486981 intergenic not near genes chr2L_7_1485001 chr2L_1485001 KN35_1-HE 41 chr2L 1536503 1536526 chr2L 1536636 1536659 15 133 0.0 6.5 3.2 3.6 156 chr2L 1536503 intergenic not near genes chr2L 1536581 intergenic not near genes chr2L 1536659 intergenic not near genes chr2L_15_1535001 chr2L_1535001 KN35_1-HE 42 chr2L 1570683 1570719 chr2L 1573556 1573592 F-element 18 2873 8.0 6.5 7.2 2.2 2909 chr2L 1570683 intron haf + chr2L 1572138 intron haf + chr2L 1573592 intron haf + chr2L_18_1570001 chr2L_1570001 KN35_1-HE 43 chr2L 1591862 1591894 chr2L 1591947 1591979 16 85 3.5 4.0 3.8 3.3 117 chr2L 1591862 intron haf + chr2L 1591920 intron haf + chr2L 1591979 intron haf + chr2L_16_1590001 chr2L_1590001 KN35_1-HE 44 chr2L 1615384 1615414 chr2L 1615467 1615497 19 83 0.0 7.0 3.5 4.2 113 chr2L 1615384 intergenic not near genes chr2L 1615440 intergenic not near genes chr2L 1615497 intergenic not near genes chr2L_19_1615001 chr2L_1615001 KN35_1-HE 45 chr2L 1678977 1679003 chr2L 1686443 1686469 blood 10 7466 6.0 8.5 7.2 1.2 7492 chr2L 1678977 intron chinmo + chr2L 1682723 intron chinmo + chr2L 1686469 intron chinmo + chr2L_10_1680001 chr2L_1680001 KN35_1-HE 46 chr2L 1711358 1711387 chr2L 1711683 1711712 mdg3 12 325 3.0 3.5 3.2 2.9 354 chr2L 1711358 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711535 3` UTR frtz - chr2L 1711712 3` UTR frtz - chr2L_12_1710001 chr2L_1710001 KN35_1-HE 47 chr2L 1876064 1876101 chr2L 1876158 1876197 10 96 6.0 3.0 4.5 1.8 133 chr2L 1876064 intron CG31663 - chr2L 1876130 intron CG31663 - chr2L 1876197 intron CG31663 - chr2L_10_1875001 chr2L_1875001 KN35_1-HE 48 chr2L 1883367 1883390 chr2L 1883497 1883520 12 130 3.5 3.5 3.5 2.7 153 chr2L 1883367 intron CG15358 - chr2L 1883444 intron CG15358 - chr2L 1883520 intron CG15358 - chr2L_12_1880001 chr2L_1880001 KN35_1-HE 49 chr2L 1905864 1905894 chr2L 1905941 1905971 14 77 3.5 4.0 3.8 2.9 107 chr2L 1905864 intron CG7337 + chr2L 1905918 intron CG7337 + chr2L 1905971 intron CG7337 + chr2L_14_1905001 chr2L_1905001 KN35_1-HE 50 chr2L 1917191 1917210 chr2L 1917270 1917289 10 79 5.5 3.5 4.5 1.8 98 chr2L 1917191 intron CG7337 + chr2L 1917240 intron CG7337 + chr2L 1917289 intron CG7337 + chr2L_10_1915001 chr2L_1915001 KN35_1-HE 51 chr2L 1924228 1924250 chr2L 1924316 1924338 9 88 5.5 4.5 5.0 1.5 110 chr2L 1924228 intron CG7337 + chr2L 1924283 intron CG7337 + chr2L 1924338 intron CG7337 + chr2L_9_1920001 chr2L_1920001 KN35_1-HE 52 chr2L 1925487 1925500 chr2L 1925565 1925578 10 78 2.5 3.5 3.0 2.5 91 chr2L 1925487 intron CG7337 + chr2L 1925532 intron CG7337 + chr2L 1925578 intron CG7337 + chr2L_10_1925001 chr2L_1925001 KN35_1-HE 53 chr2L 1948622 1948658 chr2L 1948730 1948766 5 108 0.0 2.0 1.0 2.5 144 chr2L 1948622 intergenic not near genes chr2L 1948694 intergenic not near genes chr2L 1948766 intergenic not near genes chr2L_5_1945001 chr2L_1945001 KN35_1-HE 54 chr2L 1949250 1949276 chr2L 1949341 1949367 6 91 3.0 2.5 2.8 1.6 117 chr2L 1949250 intergenic not near genes chr2L 1949308 intergenic not near genes chr2L 1949367 intergenic not near genes chr2L_6_1945001 chr2L_1945001 KN35_1-HE 55 chr2L 1953550 1953570 chr2L 1953644 1953664 5 93 0.5 4.5 2.5 1.4 114 chr2L 1953550 intron erm - chr2L 1953607 intron erm - chr2L 1953664 intron erm - chr2L_5_1950001 chr2L_1950001 KN35_1-HE 56 chr2L 2073350 2073356 chr2L 2073433 2073434 6 82 11.5 17.0 14.2 0.4 84 chr2L 2073350 intron dpr3 - chr2L 2073392 intron dpr3 - chr2L 2073434 intron dpr3 - chr2L_6_2070001 chr2L_2070001 KN35_1-HE 57 chr2L 2100375 2100408 chr2L 2109527 2109551 roo 14 9150 8.0 7.0 7.5 1.6 9176 chr2L 2100375 intron dpr3 - chr2L 2104963 intron dpr3 - chr2L 2109551 intron dpr3 - chr2L_14_2100001 chr2L_2100001 KN35_1-HE 58 chr2L 2111656 2111689 chr2L 2111741 2111774 12 84 4.5 3.5 4.0 2.4 118 chr2L 2111656 intergenic not near genes chr2L 2111715 intergenic not near genes chr2L 2111774 intergenic not near genes chr2L_12_2110001 chr2L_2110001 KN35_1-HE 59 chr2L 2112119 2112133 chr2L 2119782 2119796 opus 9 7661 6.5 5.5 6.0 1.3 7677 chr2L 2112119 intergenic not near genes chr2L 2115958 intergenic not near genes chr2L 2119796 intergenic not near genes chr2L_9_2115001 chr2L_2115001 KN35_1-HE 60 chr2L 2112137 2112146 chr2L 2119780 2119809 opus 8 7660 5.0 5.0 5.0 1.3 7672 chr2L 2112137 intergenic not near genes chr2L 2115973 intergenic not near genes chr2L 2119809 intergenic not near genes chr2L_8_2115001 chr2L_2115001 KN35_1-HE 61 chr2L 2121953 2121967 chr2L 2122105 2122119 9 152 5.5 5.5 5.5 1.4 166 chr2L 2121953 intergenic not near genes chr2L 2122036 intergenic not near genes chr2L 2122119 intergenic not near genes chr2L_9_2120001 chr2L_2120001 KN35_1-HE 62 chr2L 2205275 2205304 chr2L 2205387 2205416 14 112 3.0 6.0 4.5 2.5 141 chr2L 2205275 exon CG31668 - chr2L 2205346 intron CG31668 - chr2L 2205416 exon CG31668 - chr2L_14_2205001 chr2L_2205001 KN35_1-HE 63 chr2L 2207666 2207699 chr2L 2207748 2207770 14 81 1.5 1.5 1.5 5.6 104 chr2L 2207666 exon CG33124 - chr2L 2207718 exon CG33124 - chr2L 2207770 exon CG33124 - chr2L_14_2205001 chr2L_2205001 KN35_1-HE 64 chr2L 2250416 2250442 chr2L 2251184 2251210 9 768 9.0 0.0 4.5 1.6 794 chr2L 2250416 intergenic Ser12 - chr2L 2250813 exon Ser12 - chr2L 2251210 exon Ser12 - chr2L_9_2250001 chr2L_2250001 KN35_1-HE 65 chr2L 2256120 2256150 chr2L 2256588 2256618 9 468 3.5 1.5 2.5 2.6 498 chr2L 2256120 intergenic not near genes chr2L 2256369 intergenic not near genes chr2L 2256618 intergenic not near genes chr2L_9_2255001 chr2L_2255001 KN35_1-HE 66 chr2L 2293282 2293295 chr2L 2293375 2293388 4 93 3.5 6.0 4.8 0.7 106 chr2L 2293282 intergenic not near genes chr2L 2293335 intergenic not near genes chr2L 2293388 intergenic not near genes chr2L_4_2290001 chr2L_2290001 KN35_1-HE 67 chr2L 2294045 2294075 chr2L 2299244 2299280 copia 12 5205 2.0 2.0 2.0 4.0 5235 chr2L 2294045 intergenic not near genes chr2L 2296662 intergenic not near genes chr2L 2299280 intergenic not near genes chr2L_12_2295001 chr2L_2295001 KN35_1-HE 68 chr2L 2311075 2311091 chr2L 2311172 2311188 13 97 2.5 0.0 1.2 5.9 113 chr2L 2311075 intron CG9967 - chr2L 2311132 intron CG9967 - chr2L 2311188 intron CG9967 - chr2L_13_2310001 chr2L_2310001 KN35_1-HE 69 chr2L 2313427 2313464 chr2L 2313505 2313536 20 78 4.5 5.5 5.0 3.3 109 chr2L 2313427 intron,intron CG9967 -,eys + chr2L 2313482 intron,intron CG9967 -,eys + chr2L 2313536 intron,intron CG9967 -,eys + chr2L_20_2310001 chr2L_2310001 KN35_1-HE 70 chr2L 2331626 2331627 chr2L 2331703 2331704 4 77 3.5 9.0 6.2 0.6 78 chr2L 2331626 intron,intron CG9967 -,eys + chr2L 2331665 intron,intron CG9967 -,eys + chr2L 2331704 intron,intron CG9967 -,eys + chr2L_4_2330001 chr2L_2330001 KN35_1-HE 71 chr2L 2372362 2372403 chr2L 2372449 2372484 7 85 0.0 2.5 1.2 3.2 122 chr2L 2372362 intergenic CG3609 - chr2L 2372423 intergenic CG3609 - chr2L 2372484 3` UTR CG3609 - chr2L_7_2370001 chr2L_2370001 KN35_1-HE 72 chr2L 2427379 2427399 chr2L 2427466 2427486 7 87 2.5 3.0 2.8 1.8 107 chr2L 2427379 3` UTR CR44912 - chr2L 2427432 3` UTR CR44912 - chr2L 2427486 3` UTR CR44912 - chr2L_7_2425001 chr2L_2425001 KN35_1-HE 73 chr2L 2436466 2436481 chr2L 2438953 2438968 9 2487 17.0 21.0 19.0 0.5 2502 chr2L 2436466 intron dpp + chr2L 2437717 intron dpp + chr2L 2438968 intron dpp + chr2L_9_2435001 chr2L_2435001 KN35_1-HE 74 chr2L 2436424 2436451 chr2L 2438960 2438987 11 2536 18.0 22.5 20.2 0.5 2563 chr2L 2436424 intron dpp + chr2L 2437706 intron dpp + chr2L 2438987 intron dpp + chr2L_11_2435001 chr2L_2435001 KN35_1-HE 75 chr2L 2465544 2465571 chr2L 2465626 2465653 9 81 1.5 1.0 1.2 4.1 109 chr2L 2465544 intergenic not near genes chr2L 2465598 intergenic not near genes chr2L 2465653 intergenic not near genes chr2L_9_2465001 chr2L_2465001 KN35_1-HE 76 chr2L 2506393 2506419 chr2L 2506482 2506508 15 88 4.5 5.5 5.0 2.5 115 chr2L 2506393 intergenic not near genes chr2L 2506450 intergenic not near genes chr2L 2506508 intergenic not near genes chr2L_15_2505001 chr2L_2505001 KN35_1-HE 77 chr2L 2541449 2541481 chr2L 2541533 2541565 13 84 3.5 3.0 3.2 3.1 116 chr2L 2541449 intergenic not near genes chr2L 2541507 intergenic not near genes chr2L 2541565 intergenic not near genes chr2L_13_2540001 chr2L_2540001 KN35_1-HE 78 chr2L 2595267 2595274 chr2L 2595344 2595351 6 77 3.5 0.0 1.8 2.1 84 chr2L 2595267 intergenic not near genes chr2L 2595309 intergenic not near genes chr2L 2595351 intergenic not near genes chr2L_6_2595001 chr2L_2595001 KN35_1-HE 79 chr2L 2605812 2605822 chr2L 2605890 2605900 6 78 6.0 6.0 6.0 0.9 88 chr2L 2605812 intergenic not near genes chr2L 2605856 intergenic not near genes chr2L 2605900 intergenic not near genes chr2L_6_2605001 chr2L_2605001 KN35_1-HE 80 chr2L 2614382 2614406 chr2L 2614487 2614511 8 105 2.5 5.0 3.8 1.7 129 chr2L 2614382 intergenic not near genes chr2L 2614446 intergenic not near genes chr2L 2614511 intergenic not near genes chr2L_8_2610001 chr2L_2610001 KN35_1-HE 81 chr2L 2619864 2619900 chr2L 2620082 2620118 14 218 4.5 4.0 4.2 2.7 254 chr2L 2619864 intergenic CG43403 + chr2L 2619991 intergenic CG43403 + chr2L 2620118 intergenic CG43403 + chr2L_14_2615001 chr2L_2615001 KN35_1-HE 82 chr2L 2637225 2637258 chr2L 2637324 2637357 19 99 6.0 2.5 4.2 3.7 132 chr2L 2637225 intergenic not near genes chr2L 2637291 intergenic not near genes chr2L 2637357 intergenic not near genes chr2L_19_2635001 chr2L_2635001 KN35_1-HE 83 chr2L 2661221 2661227 chr2L 2663041 2663066 I-element 5 1830 4.0 3.5 3.8 1.0 1845 chr2L 2661221 intergenic not near genes chr2L 2662144 intergenic not near genes chr2L 2663066 intergenic not near genes chr2L_5_2660001 chr2L_2660001 KN35_1-HE 84 chr2L 2667622 2667658 chr2L 2667702 2667738 18 80 5.5 6.0 5.8 2.6 116 chr2L 2667622 intergenic not near genes chr2L 2667680 intergenic not near genes chr2L 2667738 intergenic not near genes chr2L_18_2665001 chr2L_2665001 KN35_1-HE 85 chr2L 2702665 2702696 chr2L 2702760 2702791 26 95 3.5 7.5 5.5 4.0 126 chr2L 2702665 intron CG31690 + chr2L 2702728 intron CG31690 + chr2L 2702791 intron CG31690 + chr2L_26_2700001 chr2L_2700001 KN35_1-HE 86 chr2L 2826540 2826575 chr2L 2826633 2826661 15 89 0.0 4.5 2.2 4.7 121 chr2L 2826540 intron Duox - chr2L 2826600 intron Duox - chr2L 2826661 intron Duox - chr2L_15_2825001 chr2L_2825001 KN35_1-HE 87 chr2L 2933301 2933326 chr2L 2935479 2935504 pogo 18 2178 12.5 7.5 10.0 1.6 2203 chr2L 2933301 intron lilli + chr2L 2934402 intron lilli + chr2L 2935504 intron lilli + chr2L_18_2930001 chr2L_2930001 KN35_1-HE 88 chr2L 2998777 2998808 chr2L 2998883 2998914 9 106 1.5 4.5 3.0 2.2 137 chr2L 2998777 intergenic CG3558 + chr2L 2998846 intergenic CG3558 +,CG17265 + chr2L 2998914 intergenic CG3558 +,CG17265 + chr2L_9_2995001 chr2L_2995001 KN35_1-HE 89 chr2L 3001609 3001632 chr2L 3001693 3001716 6 84 1.0 4.0 2.5 1.7 107 chr2L 3001609 intron CG17265 + chr2L 3001662 intron CG17265 + chr2L 3001716 intron CG17265 + chr2L_6_3000001 chr2L_3000001 KN35_1-HE 90 chr2L 3073009 3073028 chr2L 3078233 3078252 copia 9 5224 3.5 3.5 3.5 2.0 5243 chr2L 3073009 intron toc - chr2L 3075630 intron toc - chr2L 3078252 intron toc - chr2L_9_3075001 chr2L_3075001 KN35_1-HE 91 chr2L 3100145 3100178 chr2L 3100235 3100268 11 90 3.5 7.0 5.2 1.8 123 chr2L 3100145 intron toc - chr2L 3100206 intron toc - chr2L 3100268 intron toc - chr2L_11_3100001 chr2L_3100001 KN35_1-HE 92 chr2L 3117402 3117431 chr2L 3117488 3117517 9 86 9.0 4.5 6.8 1.2 115 chr2L 3117402 intron toc - chr2L 3117460 intron toc - chr2L 3117517 intron toc - chr2L_9_3115001 chr2L_3115001 KN35_1-HE 93 chr2L 3144929 3144957 chr2L 3145011 3145039 16 82 4.5 5.5 5.0 2.7 110 chr2L 3144929 intergenic CG12400 -,toc - chr2L 3144984 3` UTR CG12400 - chr2L 3145039 3` UTR CG12400 - chr2L_16_3140001 chr2L_3140001 KN35_1-HE 94 chr2L 3192206 3192238 chr2L 3192318 3192350 24 111 3.0 4.0 3.5 5.3 144 chr2L 3192206 exon CG34393 - chr2L 3192278 intron CG34393 - chr2L 3192350 intron CG34393 - chr2L_24_3190001 chr2L_3190001 KN35_1-HE 95 chr2L 3251494 3251527 chr2L 3259060 3259093 springer 22 7566 3.5 4.0 3.8 4.6 7599 chr2L 3251494 intergenic not near genes chr2L 3255294 intergenic not near genes chr2L 3259093 intergenic not near genes chr2L_22_3255001 chr2L_3255001 KN35_1-HE 96 chr2L 3291235 3291268 chr2L 3291316 3291349 15 81 2.5 2.5 2.5 4.3 114 chr2L 3291235 intergenic CG9664 - chr2L 3291292 3` UTR CG9664 - chr2L 3291349 3` UTR CG9664 - chr2L_15_3290001 chr2L_3290001 KN35_1-HE 97 chr2L 3311656 3311669 chr2L 3312113 3312126 4 457 7.0 6.0 6.5 0.5 470 chr2L 3311656 intron,3` UTR CG3277 +,CG15406 + chr2L 3311891 intron CG3277 + chr2L 3312126 intron CG3277 + chr2L_4_3310001 chr2L_3310001 KN35_1-HE 98 chr2L 3388599 3388631 chr2L 3388841 3388873 pogo 15 242 3.5 8.0 5.8 2.2 274 chr2L 3388599 intergenic CG42460 - chr2L 3388736 intergenic CG42460 - chr2L 3388873 intergenic CG42460 -,CR44791 + chr2L_15_3385001 chr2L_3385001 KN35_1-HE 99 chr2L 3492673 3492693 chr2L 3492769 3492790 11 97 2.5 2.5 2.5 3.1 117 chr2L 3492673 intergenic not near genes chr2L 3492732 intergenic not near genes chr2L 3492790 intergenic not near genes chr2L_11_3490001 chr2L_3490001 KN35_1-HE 100 chr2L 3508354 3508376 chr2L 3508433 3508455 10 79 0.0 7.0 3.5 2.2 101 chr2L 3508354 intergenic tim -,CR45299 + chr2L 3508404 intergenic CR45299 +,tim - chr2L 3508455 intergenic CR45299 +,tim - chr2L_10_3505001 chr2L_3505001 KN35_1-HE 101 chr2L 3532152 3532170 chr2L 3532231 3532249 7 78 6.5 9.0 7.8 0.8 97 chr2L 3532152 intron Che-13 + chr2L 3532200 intron Che-13 + chr2L 3532249 intron Che-13 + chr2L_7_3530001 chr2L_3530001 KN35_1-HE 102 chr2L 3563716 3563722 chr2L 3564138 3564144 5 422 4.0 3.5 3.8 1.0 428 chr2L 3563716 intergenic CR44747 - chr2L 3563930 intergenic CR44747 - chr2L 3564144 intergenic not near genes chr2L_5_3560001 chr2L_3560001 KN35_1-HE 103 chr2L 3584667 3584705 chr2L 3584745 3584782 15 77 1.5 3.5 2.5 4.3 115 chr2L 3584667 intergenic not near genes chr2L 3584724 intergenic not near genes chr2L 3584782 intergenic not near genes chr2L_15_3580001 chr2L_3580001 KN35_1-HE 104 chr2L 3601903 3601923 chr2L 3601997 3602017 10 94 4.0 5.5 4.8 1.7 114 chr2L 3601903 intergenic not near genes chr2L 3601960 intergenic not near genes chr2L 3602017 intergenic not near genes chr2L_10_3600001 chr2L_3600001 KN35_1-HE 105 chr2L 3611430 3611440 chr2L 3611510 3611520 7 80 7.0 0.0 3.5 1.6 90 chr2L 3611430 intergenic not near genes chr2L 3611475 intergenic not near genes chr2L 3611520 intergenic not near genes chr2L_7_3610001 chr2L_3610001 KN35_1-HE 106 chr2L 3618710 3618739 chr2L 3618806 3618835 13 96 4.0 3.0 3.5 2.9 125 chr2L 3618710 intergenic Dot + chr2L 3618772 intergenic Dot + chr2L 3618835 intergenic Dot + chr2L_13_3615001 chr2L_3615001 KN35_1-HE 107 chr2L 3649787 3649820 chr2L 3654991 3655024 copia 9 5204 3.5 4.5 4.0 1.8 5237 chr2L 3649787 intron for - chr2L 3652406 intron for - chr2L 3655024 intron for - chr2L_9_3650001 chr2L_3650001 KN35_1-HE 108 chr2L 3667970 3668065 chr2L 3668052 3668142 13 81 0.0 0.0 0.0 13.0 172 chr2L 3667970 intron CG34340 + chr2L 3668056 intron,3` UTR CG34340 +,Sfp24Ba - chr2L 3668142 intron,exon CG34340 +,Sfp24Ba - chr2L_13_3665001 chr2L_3665001 KN35_1-HE 109 chr2L 3675674 3675705 chr2L 3675764 3675789 14 90 4.0 2.5 3.2 3.3 115 chr2L 3675674 intron CG34340 + chr2L 3675732 intron CG34340 + chr2L 3675789 intron CG34340 + chr2L_14_3675001 chr2L_3675001 KN35_1-HE 110 chr2L 3685233 3685248 chr2L 3685305 3685327 5 78 4.5 0.0 2.2 1.6 94 chr2L 3685233 intron CG34340 + chr2L 3685280 intron CG34340 + chr2L 3685327 intron CG34340 + chr2L_5_3685001 chr2L_3685001 KN35_1-HE 111 chr2L 3688343 3688373 chr2L 3688421 3688451 15 78 3.5 0.0 1.8 5.4 108 chr2L 3688343 intron CG34340 + chr2L 3688397 intron CG34340 + chr2L 3688451 intron CG34340 + chr2L_15_3685001 chr2L_3685001 KN35_1-HE 112 chr2L 3785608 3785613 chr2L 3786383 3786383 4 774 25.0 22.5 23.8 0.2 775 chr2L 3785608 3` UTR CG31960 + chr2L 3785996 exon CG31958 + chr2L 3786383 intergenic CG31958 + chr2L_4_3785001 chr2L_3785001 KN35_1-HE 113 chr2L 3784706 3784728 chr2L 3786362 3786384 5 1656 35.5 26.5 31.0 0.2 1678 chr2L 3784706 intergenic CG31960 + chr2L 3785545 3` UTR CG31960 + chr2L 3786384 intergenic CG31958 + chr2L_5_3785001 chr2L_3785001 KN35_1-HE 114 chr2L 3792489 3792496 chr2L 3792581 3792588 7 92 3.0 3.5 3.2 1.7 99 chr2L 3792489 intron CG3921 + chr2L 3792538 intron CG3921 + chr2L 3792588 intron CG3921 + chr2L_7_3790001 chr2L_3790001 KN35_1-HE 115 chr2L 3819623 3819630 chr2L 3819700 3819707 6 77 1.5 4.0 2.8 1.6 84 chr2L 3819623 intergenic not near genes chr2L 3819665 intergenic not near genes chr2L 3819707 intergenic not near genes chr2L_6_3815001 chr2L_3815001 KN35_1-HE 116 chr2L 3888211 3888240 chr2L 3888314 3888343 7 103 3.5 3.0 3.2 1.7 132 chr2L 3888211 intron capu - chr2L 3888277 intron capu - chr2L 3888343 intron capu - chr2L_7_3885001 chr2L_3885001 KN35_1-HE 117 chr2L 3927259 3927290 chr2L 3927341 3927372 7 82 5.5 5.0 5.2 1.1 113 chr2L 3927259 intron fred - chr2L 3927316 intron fred - chr2L 3927372 intron fred - chr2L_7_3925001 chr2L_3925001 KN35_1-HE 118 chr2L 3943793 3943826 chr2L 3943885 3943918 18 92 2.5 4.0 3.2 4.3 125 chr2L 3943793 intron fred - chr2L 3943856 intron fred - chr2L 3943918 intron fred - chr2L_18_3940001 chr2L_3940001 KN35_1-HE 119 chr2L 3965003 3965007 chr2L 3965098 3965102 4 95 0.0 3.0 1.5 1.6 99 chr2L 3965003 intron fred - chr2L 3965052 intron fred - chr2L 3965102 intron fred - chr2L_4_3965001 chr2L_3965001 KN35_1-HE 120 chr2L 3990352 3990380 chr2L 3990459 3990487 12 107 6.0 2.0 4.0 2.4 135 chr2L 3990352 intron fred - chr2L 3990420 intron fred - chr2L 3990487 intron fred - chr2L_12_3990001 chr2L_3990001 KN35_1-HE 121 chr2L 4000782 4000793 chr2L 4000966 4000977 7 184 5.0 6.5 5.8 1.0 195 chr2L 4000782 3` UTR CG43797 + chr2L 4000880 intergenic CG43797 +,CR45344 + chr2L 4000977 intergenic CR45344 +,CG43797 + chr2L_7_4000001 chr2L_4000001 KN35_1-HE 122 chr2L 4001657 4001686 chr2L 4001756 4001785 6 99 3.0 3.5 3.2 1.4 128 chr2L 4001657 intergenic CR45344 + chr2L 4001721 intergenic CR45344 + chr2L 4001785 intergenic CR45344 + chr2L_6_4000001 chr2L_4000001 KN35_1-HE 123 chr2L 4017493 4017524 chr2L 4017574 4017605 13 81 3.5 4.0 3.8 2.7 112 chr2L 4017493 intergenic not near genes chr2L 4017549 intergenic not near genes chr2L 4017605 intergenic not near genes chr2L_13_4015001 chr2L_4015001 KN35_1-HE 124 chr2L 4044469 4044497 chr2L 4044704 4044732 15 235 5.5 7.0 6.2 2.1 263 chr2L 4044469 intron ed + chr2L 4044600 intron ed + chr2L 4044732 intron ed + chr2L_15_4040001 chr2L_4040001 KN35_1-HE 125 chr2L 4060180 4060200 chr2L 4060257 4060277 13 77 0.5 7.5 4.0 2.6 97 chr2L 4060180 intron ed + chr2L 4060228 intron ed + chr2L 4060277 intron ed + chr2L_13_4060001 chr2L_4060001 KN35_1-HE 126 chr2L 4062997 4063005 chr2L 4063103 4063111 7 106 8.5 8.5 8.5 0.7 114 chr2L 4062997 intron ed + chr2L 4063054 intron ed + chr2L 4063111 intron ed + chr2L_7_4060001 chr2L_4060001 KN35_1-HE 127 chr2L 4066035 4066063 chr2L 4068861 4068889 Juan 14 2826 6.0 1.5 3.8 2.9 2854 chr2L 4066035 intron ed + chr2L 4067462 intron ed + chr2L 4068889 intron ed + chr2L_14_4065001 chr2L_4065001 KN35_1-HE 128 chr2L 4083426 4083435 chr2L 4083613 4083622 7 187 6.5 0.0 3.2 1.7 196 chr2L 4083426 intron ed + chr2L 4083524 intron ed + chr2L 4083622 intron ed + chr2L_7_4080001 chr2L_4080001 KN35_1-HE 129 chr2L 4119968 4119975 chr2L 4120056 4120063 5 88 4.0 5.5 4.8 0.9 95 chr2L 4119968 intergenic Sr-CIII + chr2L 4120016 intergenic Sr-CIII + chr2L 4120063 intergenic Sr-CIII + chr2L_5_4120001 chr2L_4120001 KN35_1-HE 130 chr2L 4125575 4125610 chr2L 4125690 4125725 19 115 1.5 5.0 3.2 4.5 150 chr2L 4125575 intergenic not near genes chr2L 4125650 intergenic not near genes chr2L 4125725 intergenic not near genes chr2L_19_4125001 chr2L_4125001 KN35_1-HE 131 chr2L 4150631 4150646 chr2L 4150712 4150727 7 81 2.5 3.0 2.8 1.8 96 chr2L 4150631 exon CG2955 + chr2L 4150679 exon CG2955 + chr2L 4150727 exon CG2955 + chr2L_7_4150001 chr2L_4150001 KN35_1-HE 132 chr2L 4150649 4150656 chr2L 4150709 4150733 5 75 1.0 2.5 1.8 1.8 84 chr2L 4150649 exon CG2955 + chr2L 4150691 exon CG2955 + chr2L 4150733 exon CG2955 + chr2L_5_4150001 chr2L_4150001 KN35_1-HE 133 chr2L 4229620 4229643 chr2L 4229724 4229747 11 104 4.0 3.0 3.5 2.4 127 chr2L 4229620 intergenic CR44608 + chr2L 4229684 intergenic CR44608 + chr2L 4229747 intergenic CR44608 + chr2L_11_4225001 chr2L_4225001 KN35_1-HE 134 chr2L 4293919 4293948 chr2L 4294006 4294006 20 84 5.0 2.5 3.8 4.2 87 chr2L 4293919 intron tutl + chr2L 4293962 intron tutl + chr2L 4294006 intron tutl + chr2L_20_4290001 chr2L_4290001 KN35_1-HE 135 chr2L 4293949 4293952 chr2L 4294005 4294034 4 80 4.5 2.5 3.5 0.9 85 chr2L 4293949 intron tutl + chr2L 4293992 intron tutl + chr2L 4294034 intron tutl + chr2L_4_4290001 chr2L_4290001 KN35_1-HE 136 chr2L 4335581 4335601 chr2L 4335661 4335681 12 80 0.5 0.5 0.5 8.0 100 chr2L 4335581 intron Atet + chr2L 4335631 intron Atet + chr2L 4335681 intron Atet + chr2L_12_4335001 chr2L_4335001 KN35_1-HE 137 chr2L 4351474 4351502 chr2L 4351551 4351579 14 77 1.0 4.0 2.5 4.0 105 chr2L 4351474 intergenic CR44700 + chr2L 4351526 intergenic CR44700 + chr2L 4351579 intergenic CR44700 + chr2L_14_4350001 chr2L_4350001 KN35_1-HE 138 chr2L 4355521 4355538 chr2L 4355612 4355629 8 91 0.0 5.0 2.5 2.3 108 chr2L 4355521 intergenic not near genes chr2L 4355575 intergenic not near genes chr2L 4355629 intergenic not near genes chr2L_8_4355001 chr2L_4355001 KN35_1-HE 139 chr2L 4382258 4382288 chr2L 4382354 4382384 7 96 4.5 2.5 3.5 1.6 126 chr2L 4382258 exon CG17612 - chr2L 4382321 exon CG17612 - chr2L 4382384 exon CG17612 - chr2L_7_4380001 chr2L_4380001 KN35_1-HE 140 chr2L 4390029 4390040 chr2L 4390109 4390120 5 80 3.5 8.5 6.0 0.7 91 chr2L 4390029 intron Tps1 + chr2L 4390074 intron Tps1 + chr2L 4390120 intron Tps1 + chr2L_5_4390001 chr2L_4390001 KN35_1-HE 141 chr2L 4435706 4435730 chr2L 4435809 4435833 14 103 1.5 7.5 4.5 2.5 127 chr2L 4435706 intron CG15431 - chr2L 4435770 intron CG15431 - chr2L 4435833 intron CG15431 - chr2L_14_4435001 chr2L_4435001 KN35_1-HE 142 chr2L 4582519 4582542 chr2L 4582600 4582629 4 86 3.5 3.5 3.5 0.9 110 chr2L 4582519 intron,3` UTR dp -,CR43716 - chr2L 4582574 intron,3` UTR dp -,CR43716 - chr2L 4582629 intron,3` UTR dp -,CR43716 - chr2L_4_4580001 chr2L_4580001 KN35_1-HE 143 chr2L 4586965 4586999 chr2L 4587058 4587092 18 93 4.5 4.0 4.2 3.5 127 chr2L 4586965 intron dp - chr2L 4587028 intron dp - chr2L 4587092 intron dp - chr2L_18_4585001 chr2L_4585001 KN35_1-HE 144 chr2L 4601701 4601733 chr2L 4609143 4609175 mdg1 6 7442 6.0 3.0 4.5 1.1 7474 chr2L 4601701 intron dp - chr2L 4605438 intron dp - chr2L 4609175 intron dp - chr2L_6_4605001 chr2L_4605001 KN35_1-HE 145 chr2L 4698470 4698500 chr2L 4698550 4698580 11 80 3.5 3.5 3.5 2.4 110 chr2L 4698470 intron CG34351 + chr2L 4698525 intron CG34351 + chr2L 4698580 intron CG34351 + chr2L_11_4695001 chr2L_4695001 KN35_1-HE 146 chr2L 4740433 4740455 chr2L 4740515 4740537 13 82 1.0 6.0 3.5 2.9 104 chr2L 4740433 intron CG15630 - chr2L 4740485 intron CG15630 - chr2L 4740537 intron CG15630 - chr2L_13_4740001 chr2L_4740001 KN35_1-HE 147 chr2L 4784055 4784066 chr2L 4784158 4784169 6 103 4.5 10.5 7.5 0.7 114 chr2L 4784055 intron CG15630 - chr2L 4784112 intron CG15630 - chr2L 4784169 intron CG15630 - chr2L_6_4780001 chr2L_4780001 KN35_1-HE 148 chr2L 4858474 4858481 chr2L 4858563 4858570 7 89 0.5 4.5 2.5 2.0 96 chr2L 4858474 intron pog + chr2L 4858522 intron pog + chr2L 4858570 intron pog + chr2L_7_4855001 chr2L_4855001 KN35_1-HE 149 chr2L 4879154 4879178 chr2L 4880389 4880413 10 1234 16.5 23.0 19.8 0.5 1259 chr2L 4879154 exon Cf2 - chr2L 4879784 intron Cf2 - chr2L 4880413 exon Cf2 - chr2L_10_4875001 chr2L_4875001 KN35_1-HE 150 chr2L 4880438 4880450 chr2L 4881223 4881246 5 794 21.5 20.0 20.8 0.2 808 chr2L 4880438 exon Cf2 - chr2L 4880842 intron Cf2 - chr2L 4881246 exon Cf2 - chr2L_5_4880001 chr2L_4880001 KN35_1-HE 151 chr2L 4923235 4923255 chr2L 4923327 4923347 6 92 0.0 1.0 0.5 4.0 112 chr2L 4923235 intron hoe1 - chr2L 4923291 intron hoe1 - chr2L 4923347 intron hoe1 - chr2L_6_4920001 chr2L_4920001 KN35_1-HE 152 chr2L 4953513 4953544 chr2L 4953755 4953786 pogo 7 242 1.5 2.0 1.8 2.5 273 chr2L 4953513 intergenic Jon25Bii - chr2L 4953650 intergenic not near genes chr2L 4953786 intergenic Jon25Bi - chr2L_7_4950001 chr2L_4950001 KN35_1-HE 153 chr2L 4996090 4996107 chr2L 4996168 4996185 6 78 3.0 0.5 1.8 2.1 95 chr2L 4996090 intron Rtnl1 - chr2L 4996138 intron Rtnl1 - chr2L 4996185 intron Rtnl1 - chr2L_6_4995001 chr2L_4995001 KN35_1-HE 154 chr2L 5010862 5010878 chr2L 5010940 5010956 13 78 0.0 9.5 4.8 2.2 94 chr2L 5010862 intergenic CG31917 -,Tfb5 -,CG3887 + chr2L 5010909 intergenic CG3887 +,CG31917 -,Tfb5 - chr2L 5010956 5` UTR CG3887 + chr2L_13_5010001 chr2L_5010001 KN35_1-HE 155 chr2L 5060357 5060391 chr2L 5060438 5060472 9 81 2.0 2.0 2.0 3.0 115 chr2L 5060357 intergenic CR45291 -,qtc + chr2L 5060414 intergenic CR45291 -,qtc + chr2L 5060472 3` UTR CR45291 - chr2L_9_5060001 chr2L_5060001 KN35_1-HE 156 chr2L 5105830 5105864 chr2L 5106388 5106422 16 558 0.0 3.5 1.8 5.7 592 chr2L 5105830 intron Msp300 + chr2L 5106126 intron Msp300 + chr2L 5106422 intron Msp300 + chr2L_16_5105001 chr2L_5105001 KN35_1-HE 157 chr2L 5117299 5117322 chr2L 5117382 5117405 10 83 3.0 0.0 1.5 4.0 106 chr2L 5117299 intron Msp300 + chr2L 5117352 intron Msp300 + chr2L 5117405 intron Msp300 + chr2L_10_5115001 chr2L_5115001 KN35_1-HE 158 chr2L 5262525 5262543 chr2L 5262603 5262621 9 76 6.5 7.5 7.0 1.1 96 chr2L 5262525 intron tkv - chr2L 5262573 intron tkv - chr2L 5262621 intron tkv - chr2L_9_5260001 chr2L_5260001 KN35_1-HE 159 chr2L 5265763 5265796 chr2L 5265907 5265940 15 143 0.0 4.5 2.2 4.7 177 chr2L 5265763 intron,exon tkv -,Cyp4ac1 + chr2L 5265852 intron,3` UTR tkv -,Cyp4ac1 + chr2L 5265940 intron tkv - chr2L_15_5265001 chr2L_5265001 KN35_1-HE 160 chr2L 5342786 5342803 chr2L 5345162 5345179 Doc 6 2376 4.0 6.5 5.2 1.0 2393 chr2L 5342786 intergenic not near genes chr2L 5343982 intergenic not near genes chr2L 5345179 intergenic not near genes chr2L_6_5340001 chr2L_5340001 KN35_1-HE 161 chr2L 5448009 5448018 chr2L 5448094 5448103 5 85 0.5 10.5 5.5 0.8 94 chr2L 5448009 intergenic not near genes chr2L 5448056 intergenic not near genes chr2L 5448103 intergenic not near genes chr2L_5_5445001 chr2L_5445001 KN35_1-HE 162 chr2L 5475155 5475162 chr2L 5475261 5475268 7 106 5.0 3.5 4.2 1.3 113 chr2L 5475155 intergenic not near genes chr2L 5475212 intergenic not near genes chr2L 5475268 intergenic not near genes chr2L_7_5475001 chr2L_5475001 KN35_1-HE 163 chr2L 5500058 5500071 chr2L 5500145 5500158 6 87 10.5 13.0 11.8 0.5 100 chr2L 5500058 intergenic not near genes chr2L 5500108 intergenic not near genes chr2L 5500158 intergenic not near genes chr2L_6_5500001 chr2L_5500001 KN35_1-HE 164 chr2L 5516658 5516685 chr2L 5516738 5516765 13 80 2.0 3.5 2.8 3.4 107 chr2L 5516658 intergenic not near genes chr2L 5516712 intergenic not near genes chr2L 5516765 intergenic not near genes chr2L_13_5515001 chr2L_5515001 KN35_1-HE 165 chr2L 5583684 5583715 chr2L 5583840 5583870 9 155 2.5 5.0 3.8 1.9 186 chr2L 5583684 intergenic not near genes chr2L 5583777 intergenic not near genes chr2L 5583870 intergenic not near genes chr2L_9_5580001 chr2L_5580001 KN35_1-HE 166 chr2L 5587597 5587622 chr2L 5587675 5587700 18 77 3.0 4.5 3.8 3.8 103 chr2L 5587597 exon CG7251 - chr2L 5587648 exon CG7251 - chr2L 5587700 exon CG7251 - chr2L_18_5585001 chr2L_5585001 KN35_1-HE 167 chr2L 5594328 5594357 chr2L 5594412 5594445 4 90 4.5 0.0 2.2 1.2 117 chr2L 5594328 intergenic not near genes chr2L 5594386 intergenic not near genes chr2L 5594445 intergenic not near genes chr2L_4_5590001 chr2L_5590001 KN35_1-HE 168 chr2L 5605646 5605651 chr2L 5605741 5605746 4 95 11.0 0.5 5.8 0.6 100 chr2L 5605646 intron CG14010 - chr2L 5605696 intron CG14010 - chr2L 5605746 intron CG14010 - chr2L_4_5605001 chr2L_5605001 KN35_1-HE 169 chr2L 5657446 5657463 chr2L 5657575 5657592 9 129 5.5 0.5 3.0 2.2 146 chr2L 5657446 intron CG31646 - chr2L 5657519 intron CG31646 - chr2L 5657592 intron CG31646 - chr2L_9_5655001 chr2L_5655001 KN35_1-HE 170 chr2L 5715237 5715267 chr2L 5715399 5715429 16 162 2.5 4.0 3.2 3.8 192 chr2L 5715237 intergenic CG14007 -,CR44818 + chr2L 5715333 intergenic CG14007 -,CR44818 + chr2L 5715429 3` UTR CG14007 - chr2L_16_5715001 chr2L_5715001 KN35_1-HE 171 chr2L 5726300 5726310 chr2L 5726388 5726398 5 88 6.5 10.5 8.5 0.5 98 chr2L 5726300 intron CG11030 + chr2L 5726349 intron CG11030 + chr2L 5726398 intron CG11030 + chr2L_5_5725001 chr2L_5725001 KN35_1-HE 172 chr2L 5743658 5743665 chr2L 6014167 6014175 7 270510 21.5 17.5 19.5 0.3 270517 chr2L 5743658 intron CG11030 + chr2L 5878916 intron rau - chr2L 6014175 intron H2.0 - chr2L_7_5875001 chr2L_5875001 KN35_1-HE 173 chr2L 5749070 5749103 chr2L 5749648 5749681 13 578 4.0 4.0 4.0 2.6 611 chr2L 5749070 intron CG11030 + chr2L 5749376 intron CG11030 + chr2L 5749681 intron CG11030 + chr2L_13_5745001 chr2L_5745001 KN35_1-HE 174 chr2L 5806032 5806043 chr2L 5806179 5806190 7 147 1.5 3.0 2.2 2.2 158 chr2L 5806032 intron CG11034 + chr2L 5806111 intron CG11034 + chr2L 5806190 intron CG11034 + chr2L_7_5805001 chr2L_5805001 KN35_1-HE 175 chr2L 5810718 5810728 chr2L 5810799 5810809 5 81 0.0 7.0 3.5 1.1 91 chr2L 5810718 5` UTR CR44576 + chr2L 5810764 5` UTR CR44576 + chr2L 5810809 5` UTR CR44576 + chr2L_5_5810001 chr2L_5810001 KN35_1-HE 176 chr2L 5826050 5826084 chr2L 5826134 5826168 13 84 4.5 4.0 4.2 2.5 118 chr2L 5826050 intron TrissinR + chr2L 5826109 intron TrissinR + chr2L 5826168 intron TrissinR + chr2L_13_5825001 chr2L_5825001 KN35_1-HE 177 chr2L 5827710 5827739 chr2L 5836715 5836748 roo 17 9008 5.0 7.0 6.0 2.4 9038 chr2L 5827710 intron TrissinR + chr2L 5832229 intron TrissinR + chr2L 5836748 intron TrissinR + chr2L_17_5830001 chr2L_5830001 KN35_1-HE 178 chr2L 5895949 5895990 chr2L 5896037 5896067 9 82 0.0 4.0 2.0 3.0 118 chr2L 5895949 intergenic not near genes chr2L 5896008 intergenic not near genes chr2L 5896067 intergenic not near genes chr2L_9_5895001 chr2L_5895001 KN35_1-HE 179 chr2L 5897584 5897612 chr2L 5897707 5897735 14 123 0.0 2.0 1.0 7.0 151 chr2L 5897584 intergenic not near genes chr2L 5897660 intergenic not near genes chr2L 5897735 intergenic not near genes chr2L_14_5895001 chr2L_5895001 KN35_1-HE 180 chr2L 5933747 5933781 chr2L 5933864 5933898 10 118 53.5 53.0 53.2 0.2 151 chr2L 5933747 intron dsf + chr2L 5933822 intron dsf + chr2L 5933898 intron dsf + chr2L_10_5930001 chr2L_5930001 KN35_1-HE 181 chr2L 5942024 5942054 chr2L 5942117 5942147 23 92 5.5 3.5 4.5 4.2 123 chr2L 5942024 5` UTR CR45289 + chr2L 5942086 5` UTR CR45289 + chr2L 5942147 5` UTR CR45289 + chr2L_23_5940001 chr2L_5940001 KN35_1-HE 182 chr2L 5989034 5989064 chr2L 5989111 5989139 10 77 4.0 0.0 2.0 3.3 105 chr2L 5989034 intergenic ifc +,lid - chr2L 5989086 intergenic ifc +,lid - chr2L 5989139 intergenic lid -,ifc + chr2L_10_5985001 chr2L_5985001 KN35_1-HE 183 chr2L 5993328 5993359 chr2L 5993420 5993451 15 92 4.5 4.0 4.2 2.9 123 chr2L 5993328 exon lid - chr2L 5993390 intron lid - chr2L 5993451 intron lid - chr2L_15_5990001 chr2L_5990001 KN35_1-HE 184 chr2L 6007099 6007125 chr2L 6007176 6007202 5 77 0.0 0.0 0.0 5.0 103 chr2L 6007099 intergenic CG9098 -,Gal - chr2L 6007150 intergenic CG9098 -,Gal - chr2L 6007202 intergenic CG9098 -,Gal - chr2L_5_6005001 chr2L_6005001 KN35_1-HE 185 chr2L 5743429 5743448 chr2L 6014663 6014682 12 271234 12.0 32.5 22.2 0.5 271253 chr2L 5743429 intron CG11030 + chr2L 5879056 5` UTR rau - chr2L 6014682 intron H2.0 - chr2L_12_5875001 chr2L_5875001 KN35_1-HE 186 chr2L 6053879 6053885 chr2L 6053955 6053962 5 77 1.5 3.5 2.5 1.4 83 chr2L 6053879 intergenic CG9135 +,CG13995 + chr2L 6053920 intergenic CG9135 +,CG13995 + chr2L 6053962 intergenic CG9135 +,CG13995 + chr2L_5_6050001 chr2L_6050001 KN35_1-HE 187 chr2L 6056306 6056334 chr2L 6056403 6056431 11 96 4.5 5.0 4.8 1.9 125 chr2L 6056306 intron CG13995 + chr2L 6056368 intron CG13995 + chr2L 6056431 intron CG13995 + chr2L_11_6055001 chr2L_6055001 KN35_1-HE 188 chr2L 6070894 6070927 chr2L 6070984 6071017 16 90 0.0 3.5 1.8 5.7 123 chr2L 6070894 intergenic Kr-h2 +,CG9154 - chr2L 6070956 intergenic Kr-h2 +,CG9154 - chr2L 6071017 5` UTR Kr-h2 + chr2L_16_6070001 chr2L_6070001 KN35_1-HE 189 chr2L 6093693 6093718 chr2L 6093774 6093799 5 81 3.0 2.0 2.5 1.4 106 chr2L 6093693 exon,3` UTR Kr-h1 +,CG45075 + chr2L 6093746 intron,intron Kr-h1 +,CG45075 + chr2L 6093799 exon,3` UTR Kr-h1 +,CG45075 + chr2L_5_6090001 chr2L_6090001 KN35_1-HE 190 chr2L 6101766 6101796 chr2L 6101852 6101882 4 86 1.0 3.0 2.0 1.3 116 chr2L 6101766 5` UTR stai + chr2L 6101824 intron stai + chr2L 6101882 intron stai + chr2L_4_6100001 chr2L_6100001 KN35_1-HE 191 chr2L 6153691 6153712 chr2L 6153788 6153809 4 97 5.5 4.0 4.8 0.7 118 chr2L 6153691 3` UTR Muc26B + chr2L 6153750 intergenic Muc26B +,CG31639 - chr2L 6153809 intergenic CG31639 -,Muc26B + chr2L_4_6150001 chr2L_6150001 KN35_1-HE 192 chr2L 6182224 6182240 chr2L 6182303 6182319 8 79 1.5 6.0 3.8 1.7 95 chr2L 6182224 intron CG34380 + chr2L 6182272 intron CG34380 + chr2L 6182319 intron CG34380 + chr2L_8_6180001 chr2L_6180001 KN35_1-HE 193 chr2L 6268525 6268537 chr2L 6268607 6268624 9 86 1.5 0.5 1.0 4.5 99 chr2L 6268525 intron Ddr + chr2L 6268574 intron Ddr + chr2L 6268624 intron Ddr + chr2L_9_6265001 chr2L_6265001 KN35_1-HE 194 chr2L 6283970 6283979 chr2L 6284082 6284091 4 112 0.0 13.5 6.8 0.5 121 chr2L 6283970 intron Ddr + chr2L 6284030 intron Ddr + chr2L 6284091 intron Ddr + chr2L_4_6280001 chr2L_6280001 KN35_1-HE 195 chr2L 6286390 6286423 chr2L 6286485 6286518 15 95 3.5 4.0 3.8 3.1 128 chr2L 6286390 intron Ddr + chr2L 6286454 intron Ddr + chr2L 6286518 intron Ddr + chr2L_15_6285001 chr2L_6285001 KN35_1-HE 196 chr2L 6300556 6300594 chr2L 6300643 6300681 19 87 2.0 5.5 3.8 4.0 125 chr2L 6300556 intron Ddr + chr2L 6300618 intron Ddr + chr2L 6300681 intron Ddr + chr2L_19_6300001 chr2L_6300001 KN35_1-HE 197 chr2L 6312357 6312363 chr2L 6312435 6312441 4 78 0.0 10.0 5.0 0.7 84 chr2L 6312357 intron Ddr + chr2L 6312399 intron Ddr + chr2L 6312441 intron Ddr + chr2L_4_6310001 chr2L_6310001 KN35_1-HE 198 chr2L 6342398 6342421 chr2L 6342481 6342504 9 83 0.0 3.5 1.8 3.2 106 chr2L 6342398 intron Cpr + chr2L 6342451 intron Cpr + chr2L 6342504 intron Cpr + chr2L_9_6340001 chr2L_6340001 KN35_1-HE 199 chr2L 6351172 6351177 chr2L 6351259 6351264 4 87 4.5 0.5 2.5 1.1 92 chr2L 6351172 intergenic CG9498 - chr2L 6351218 intergenic CG9498 - chr2L 6351264 intergenic CG9498 - chr2L_4_6350001 chr2L_6350001 KN35_1-HE 200 chr2L 6363147 6363183 chr2L 6366070 6366106 Burdock 12 2923 2.5 4.0 3.2 2.9 2959 chr2L 6363147 intergenic not near genes chr2L 6364626 intergenic not near genes chr2L 6366106 intergenic not near genes chr2L_12_6360001 chr2L_6360001 KN35_1-HE 201 chr2L 6371678 6371712 chr2L 6371757 6371791 14 79 1.0 1.5 1.2 6.4 113 chr2L 6371678 intergenic not near genes chr2L 6371734 intergenic not near genes chr2L 6371791 intergenic not near genes chr2L_14_6370001 chr2L_6370001 KN35_1-HE 202 chr2L 6387994 6388020 chr2L 6388074 6388100 10 80 4.0 2.0 3.0 2.5 106 chr2L 6387994 intron CG42368 - chr2L 6388047 intron CG42368 - chr2L 6388100 intron CG42368 - chr2L_10_6385001 chr2L_6385001 KN35_1-HE 203 chr2L 6388976 6388987 chr2L 6389061 6389072 6 85 9.0 0.5 4.8 1.0 96 chr2L 6388976 intron CG42368 - chr2L 6389024 intron CG42368 - chr2L 6389072 intron CG42368 - chr2L_6_6385001 chr2L_6385001 KN35_1-HE 204 chr2L 6398698 6398729 chr2L 6398780 6398811 11 82 2.5 4.5 3.5 2.4 113 chr2L 6398698 intron CG42368 - chr2L 6398754 intron CG42368 - chr2L 6398811 intron CG42368 - chr2L_11_6395001 chr2L_6395001 KN35_1-HE 205 chr2L 6408164 6408178 chr2L 6408241 6408255 5 77 3.5 6.5 5.0 0.8 91 chr2L 6408164 intron CG42368 - chr2L 6408210 intron CG42368 - chr2L 6408255 exon CG42368 - chr2L_5_6405001 chr2L_6405001 KN35_1-HE 206 chr2L 6426877 6426886 chr2L 6445138 6445147 roo 6 18261 3.5 2.0 2.8 1.6 18270 chr2L 6426877 3` UTR CG9527 - chr2L 6436012 intron CG9527 - chr2L 6445147 exon CG9527 - chr2L_6_6435001 chr2L_6435001 KN35_1-HE 207 chr2L 6483673 6483778 chr2L 6483592 6483877 5 88 1.0 1.0 1.0 2.5 204 chr2L 6483673 exon DLP + chr2L 6483775 exon DLP + chr2L 6483877 exon DLP + chr2L_5_6480001 chr2L_6480001 KN35_1-HE 208 chr2L 6504973 6504992 chr2L 6505063 6505082 10 90 4.5 8.5 6.5 1.3 109 chr2L 6504973 intron CG31637 + chr2L 6505028 intron CG31637 + chr2L 6505082 intron CG31637 + chr2L_10_6505001 chr2L_6505001 KN35_1-HE 209 chr2L 6537141 6537165 chr2L 6537220 6537244 17 79 7.5 3.5 5.5 2.6 103 chr2L 6537141 intron eya - chr2L 6537192 intron eya - chr2L 6537244 intron eya - chr2L_17_6535001 chr2L_6535001 KN35_1-HE 210 chr2L 6544369 6544395 chr2L 6544462 6544488 13 93 3.5 4.5 4.0 2.6 119 chr2L 6544369 intron eya - chr2L 6544428 intron eya - chr2L 6544488 intron eya - chr2L_13_6540001 chr2L_6540001 KN35_1-HE 211 chr2L 6593284 6593319 chr2L 6593371 6593409 23 90 4.5 5.5 5.0 3.8 125 chr2L 6593284 intron CG11319 - chr2L 6593346 intron CG11319 - chr2L 6593409 intron CG11319 - chr2L_23_6590001 chr2L_6590001 KN35_1-HE 212 chr2L 6599917 6599947 chr2L 6600124 6600154 12 207 1.5 3.5 2.5 3.4 237 chr2L 6599917 intron CG11319 - chr2L 6600036 intron CG11319 - chr2L 6600154 intron CG11319 - chr2L_12_6600001 chr2L_6600001 KN35_1-HE 213 chr2L 6643149 6643185 chr2L 6643235 6643271 15 86 3.0 3.0 3.0 3.8 122 chr2L 6643149 intron CG31635 - chr2L 6643210 intron CG31635 - chr2L 6643271 intron CG31635 - chr2L_15_6640001 chr2L_6640001 KN35_1-HE 214 chr2L 6740395 6740425 chr2L 6740476 6740506 10 81 0.0 2.0 1.0 5.0 111 chr2L 6740395 intergenic TTLL3A - chr2L 6740450 intergenic TTLL3A - chr2L 6740506 intergenic TTLL3A - chr2L_10_6740001 chr2L_6740001 KN35_1-HE 215 chr2L 6798943 6798958 chr2L 6799042 6799057 10 99 7.5 0.0 3.8 2.1 114 chr2L 6798943 intergenic nrv2 -,CR43610 + chr2L 6799000 intergenic nrv2 -,CR43610 + chr2L 6799057 intergenic CR43610 +,nrv2 - chr2L_10_6795001 chr2L_6795001 KN35_1-HE 216 chr2L 6850378 6850413 chr2L 6850462 6850497 21 84 3.0 3.0 3.0 5.2 119 chr2L 6850378 intergenic not near genes chr2L 6850438 intergenic not near genes chr2L 6850497 intergenic not near genes chr2L_21_6850001 chr2L_6850001 KN35_1-HE 217 chr2L 6876774 6876807 chr2L 6882966 6882997 diver 12 6191 5.0 5.0 5.0 2.0 6223 chr2L 6876774 intron Nlg2 + chr2L 6879886 intron Nlg2 + chr2L 6882997 intron Nlg2 + chr2L_12_6875001 chr2L_6875001 KN35_1-HE 218 chr2L 7071653 7071685 chr2L 7071801 7071833 9 148 3.5 2.0 2.8 2.4 180 chr2L 7071653 intron Pvf2 - chr2L 7071743 intron Pvf2 - chr2L 7071833 intron Pvf2 - chr2L_9_7070001 chr2L_7070001 KN35_1-HE 219 chr2L 7121154 7121185 chr2L 7121239 7121270 8 82 5.0 1.5 3.2 1.9 116 chr2L 7121154 intron Pvf3 - chr2L 7121212 intron Pvf3 - chr2L 7121270 intron Pvf3 - chr2L_8_7120001 chr2L_7120001 KN35_1-HE 220 chr2L 7125789 7125805 chr2L 7125906 7125922 7 117 5.0 3.5 4.2 1.3 133 chr2L 7125789 intron Pvf3 - chr2L 7125856 intron Pvf3 - chr2L 7125922 intron Pvf3 - chr2L_7_7125001 chr2L_7125001 KN35_1-HE 221 chr2L 7143788 7143801 chr2L 7143903 7143916 5 115 7.0 3.0 5.0 0.8 128 chr2L 7143788 intron,5` UTR Pvf3 -,CR44612 + chr2L 7143852 intron,5` UTR Pvf3 -,CR44612 + chr2L 7143916 intron,5` UTR Pvf3 -,CR44612 + chr2L_5_7140001 chr2L_7140001 KN35_1-HE 222 chr2L 7237896 7237923 chr2L 7238107 7238134 6 211 5.0 4.0 4.5 1.1 238 chr2L 7237896 intron Ndae1 - chr2L 7238015 intron Ndae1 - chr2L 7238134 intron Ndae1 - chr2L_6_7235001 chr2L_7235001 KN35_1-HE 223 chr2L 7274913 7274942 chr2L 7274992 7275021 16 79 5.0 8.5 6.8 2.1 108 chr2L 7274913 intron Wnt4 - chr2L 7274967 intron Wnt4 - chr2L 7275021 intron Wnt4 - chr2L_16_7270001 chr2L_7270001 KN35_1-HE 224 chr2L 7287681 7287688 chr2L 7287774 7287783 6 95 13.0 0.0 6.5 0.8 102 chr2L 7287681 intergenic not near genes chr2L 7287732 intergenic not near genes chr2L 7287783 intergenic not near genes chr2L_6_7285001 chr2L_7285001 KN35_1-HE 225 chr2L 7295994 7296023 chr2L 7296133 7296164 9 140 9.5 5.0 7.2 1.1 170 chr2L 7295994 intergenic not near genes chr2L 7296079 intergenic not near genes chr2L 7296164 intergenic not near genes chr2L_9_7295001 chr2L_7295001 KN35_1-HE 226 chr2L 7335199 7335230 chr2L 7335297 7335328 14 98 8.5 0.5 4.5 2.5 129 chr2L 7335199 intron Wnt6 + chr2L 7335264 intron Wnt6 + chr2L 7335328 intron Wnt6 + chr2L_14_7335001 chr2L_7335001 KN35_1-HE 227 chr2L 7340040 7340051 chr2L 7340120 7340131 4 80 0.0 9.5 4.8 0.7 91 chr2L 7340040 intron Wnt6 + chr2L 7340086 intron Wnt6 + chr2L 7340131 intron Wnt6 + chr2L_4_7340001 chr2L_7340001 KN35_1-HE 228 chr2L 7343325 7343358 chr2L 7350440 7350474 roo 14 7116 4.0 5.0 4.5 2.5 7149 chr2L 7343325 intron Wnt6 + chr2L 7346900 intron Wnt6 + chr2L 7350474 intron Wnt6 + chr2L_14_7345001 chr2L_7345001 KN35_1-HE 229 chr2L 7367751 7367770 chr2L 7367957 7367976 11 206 3.5 6.5 5.0 1.8 225 chr2L 7367751 intron Wnt10 + chr2L 7367864 intron Wnt10 + chr2L 7367976 intron Wnt10 + chr2L_11_7365001 chr2L_7365001 KN35_1-HE 230 chr2L 7377892 7377901 chr2L 7377990 7377999 8 98 0.0 8.5 4.2 1.5 107 chr2L 7377892 intron ninaC + chr2L 7377946 intron ninaC + chr2L 7377999 intron ninaC + chr2L_8_7375001 chr2L_7375001 KN35_1-HE 231 chr2L 7436200 7436216 chr2L 7436289 7436305 9 89 7.5 6.5 7.0 1.1 105 chr2L 7436200 intergenic not near genes chr2L 7436252 intergenic not near genes chr2L 7436305 intergenic not near genes chr2L_9_7435001 chr2L_7435001 KN35_1-HE 232 chr2L 7749082 7749104 chr2L 7749161 7749184 5 80 3.5 2.0 2.8 1.3 102 chr2L 7749082 intergenic not near genes chr2L 7749133 intergenic not near genes chr2L 7749184 intergenic not near genes chr2L_5_7745001 chr2L_7745001 KN35_1-HE 233 chr2L 7757734 7757738 chr2L 7757818 7757822 6 84 0.0 7.5 3.8 1.2 88 chr2L 7757734 intron CG7196 + chr2L 7757778 intron CG7196 + chr2L 7757822 intron CG7196 + chr2L_6_7755001 chr2L_7755001 KN35_1-HE 234 chr2L 7922740 7922776 chr2L 7922822 7922858 12 82 2.5 1.5 2.0 4.0 118 chr2L 7922740 intron Snoo - chr2L 7922799 intron Snoo - chr2L 7922858 intron Snoo - chr2L_12_7920001 chr2L_7920001 KN35_1-HE 235 chr2L 7928268 7928301 chr2L 7928355 7928388 14 87 4.5 6.0 5.2 2.3 120 chr2L 7928268 intron Snoo - chr2L 7928328 intron Snoo - chr2L 7928388 intron Snoo - chr2L_14_7925001 chr2L_7925001 KN35_1-HE 236 chr2L 7944332 7944356 chr2L 7944597 7944621 8 265 5.0 3.5 4.2 1.5 289 chr2L 7944332 intron Snoo - chr2L 7944476 intron Snoo - chr2L 7944621 intron Snoo - chr2L_8_7940001 chr2L_7940001 KN35_1-HE 237 chr2L 7945985 7946012 chr2L 7946069 7946096 12 84 6.5 0.0 3.2 2.9 111 chr2L 7945985 intron Snoo - chr2L 7946040 intron Snoo - chr2L 7946096 intron Snoo - chr2L_12_7945001 chr2L_7945001 KN35_1-HE 238 chr2L 7959040 7959070 chr2L 7960452 7960482 pogo 8 1412 1.0 0.5 0.8 4.4 1442 chr2L 7959040 intron Snoo - chr2L 7959761 intron Snoo - chr2L 7960482 intron Snoo - chr2L_8_7955001 chr2L_7955001 KN35_1-HE 239 chr2L 7977091 7977113 chr2L 7984068 7984090 297 7 6977 2.0 5.5 3.8 1.5 6999 chr2L 7977091 intron Snoo - chr2L 7980590 intron Snoo - chr2L 7984090 intron,5` UTR Snoo -,CG7231 + chr2L_7_7980001 chr2L_7980001 KN35_1-HE 240 chr2L 7997029 7997065 chr2L 7997130 7997166 20 101 2.5 3.0 2.8 5.3 137 chr2L 7997029 intron CG7227 - chr2L 7997098 intron CG7227 - chr2L 7997166 intron CG7227 - chr2L_20_7995001 chr2L_7995001 KN35_1-HE 241 chr2L 8003028 8003036 chr2L 8003111 8003119 4 83 7.0 0.0 3.5 0.9 91 chr2L 8003028 intron Wwox - chr2L 8003074 intron Wwox - chr2L 8003119 intron Wwox - chr2L_4_8000001 chr2L_8000001 KN35_1-HE 242 chr2L 8018821 8018838 chr2L 8023606 8023623 Doc 7 4785 0.0 2.0 1.0 3.5 4802 chr2L 8018821 intron Tg + chr2L 8021222 intron Tg + chr2L 8023623 intron Tg + chr2L_7_8020001 chr2L_8020001 KN35_1-HE 243 chr2L 8044103 8044130 chr2L 8044183 8044210 12 80 2.5 4.0 3.2 2.9 107 chr2L 8044103 intron CG7466 + chr2L 8044156 intron CG7466 + chr2L 8044210 intron CG7466 + chr2L_12_8040001 chr2L_8040001 KN35_1-HE 244 chr2L 8101415 8101444 chr2L 8101503 8101532 16 88 7.5 7.0 7.2 2.0 117 chr2L 8101415 intron Bsg + chr2L 8101474 intron Bsg + chr2L 8101532 intron Bsg + chr2L_16_8100001 chr2L_8100001 KN35_1-HE 245 chr2L 8141942 8141961 chr2L 8142026 8142045 11 84 7.0 8.5 7.8 1.2 103 chr2L 8141942 intron CG8552 - chr2L 8141994 intron CG8552 - chr2L 8142045 intron CG8552 - chr2L_11_8140001 chr2L_8140001 KN35_1-HE 246 chr2L 8171274 8171298 chr2L 8171356 8171380 13 82 0.0 9.0 4.5 2.4 106 chr2L 8171274 intron Piezo + chr2L 8171327 intron Piezo + chr2L 8171380 intron Piezo + chr2L_13_8170001 chr2L_8170001 KN35_1-HE 247 chr2L 8253305 8253338 chr2L 8253382 8253415 27 77 4.0 9.0 6.5 3.6 110 chr2L 8253305 intron CG8086 - chr2L 8253360 intron CG8086 - chr2L 8253415 intron CG8086 - chr2L_27_8250001 chr2L_8250001 KN35_1-HE 248 chr2L 8271622 8271654 chr2L 8271699 8271731 18 77 0.5 4.5 2.5 5.1 109 chr2L 8271622 intron Btk29A - chr2L 8271676 intron Btk29A - chr2L 8271731 intron Btk29A - chr2L_18_8270001 chr2L_8270001 KN35_1-HE 249 chr2L 8285020 8285031 chr2L 8285097 8285108 5 77 9.0 5.5 7.2 0.6 88 chr2L 8285020 intron Btk29A - chr2L 8285064 intron Btk29A - chr2L 8285108 intron Btk29A - chr2L_5_8285001 chr2L_8285001 KN35_1-HE 250 chr2L 8286293 8286327 chr2L 8286381 8286415 13 87 4.0 8.0 6.0 1.9 122 chr2L 8286293 intron Btk29A - chr2L 8286354 intron Btk29A - chr2L 8286415 intron Btk29A - chr2L_13_8285001 chr2L_8285001 KN35_1-HE 251 chr2L 8351557 8351560 chr2L 8351635 8351638 4 78 1.5 2.5 2.0 1.3 81 chr2L 8351557 intergenic CG7778 + chr2L 8351598 intergenic CG7778 + chr2L 8351638 intergenic not near genes chr2L_4_8350001 chr2L_8350001 KN35_1-HE 252 chr2L 8452420 8452447 chr2L 8461592 8461619 roo 14 9172 5.0 7.5 6.2 1.9 9199 chr2L 8452420 intron fu12 - chr2L 8457020 intron fu12 - chr2L 8461619 intron fu12 - chr2L_14_8455001 chr2L_8455001 KN35_1-HE 253 chr2L 8480813 8480845 chr2L 8481045 8481077 13 232 2.5 2.0 2.2 4.1 264 chr2L 8480813 intron d + chr2L 8480945 intron d + chr2L 8481077 intron d + chr2L_13_8480001 chr2L_8480001 KN35_1-HE 254 chr2L 8498204 8498238 chr2L 8498286 8498321 7 82 1.5 2.5 2.0 2.3 117 chr2L 8498204 intron Dh31 - chr2L 8498262 intron Dh31 - chr2L 8498321 intron Dh31 - chr2L_7_8495001 chr2L_8495001 KN35_1-HE 255 chr2L 8536532 8536568 chr2L 8536611 8536647 18 79 2.0 5.5 3.8 3.8 115 chr2L 8536532 intron CG17834 + chr2L 8536590 intron CG17834 + chr2L 8536647 intron CG17834 + chr2L_18_8535001 chr2L_8535001 KN35_1-HE 256 chr2L 8543184 8543197 chr2L 8543261 8543274 8 76 1.5 2.5 2.0 2.7 90 chr2L 8543184 intron Sema-1a + chr2L 8543229 intron Sema-1a + chr2L 8543274 intron Sema-1a + chr2L_8_8540001 chr2L_8540001 KN35_1-HE 257 chr2L 8594462 8594498 chr2L 8601517 8601553 297 5 7055 5.5 0.0 2.8 1.3 7091 chr2L 8594462 intron,3` UTR Sema-1a +,CR43855 - chr2L 8598008 intron Sema-1a + chr2L 8601553 intron Sema-1a + chr2L_5_8595001 chr2L_8595001 KN35_1-HE 258 chr2L 8612856 8612870 chr2L 8612934 8612948 10 78 5.0 10.5 7.8 1.1 92 chr2L 8612856 intron Sema-1a + chr2L 8612902 intron Sema-1a + chr2L 8612948 intron Sema-1a + chr2L_10_8610001 chr2L_8610001 KN35_1-HE 259 chr2L 8629261 8629295 chr2L 8629340 8629374 25 79 10.0 7.0 8.5 2.6 113 chr2L 8629261 intron Sema-1a + chr2L 8629318 intron Sema-1a + chr2L 8629374 intron Sema-1a + chr2L_25_8625001 chr2L_8625001 KN35_1-HE 260 chr2L 8643801 8643828 chr2L 8643892 8643919 11 91 3.0 5.5 4.2 2.1 118 chr2L 8643801 intron Sema-1a + chr2L 8643860 intron Sema-1a + chr2L 8643919 intron Sema-1a + chr2L_11_8640001 chr2L_8640001 KN35_1-HE 261 chr2L 8654228 8654243 chr2L 8654333 8654348 6 105 5.5 6.5 6.0 0.9 120 chr2L 8654228 intron Sema-1a + chr2L 8654288 intron Sema-1a + chr2L 8654348 intron Sema-1a + chr2L_6_8650001 chr2L_8650001 KN35_1-HE 262 chr2L 8695816 8695847 chr2L 8695970 8696001 8 154 6.5 2.0 4.2 1.5 185 chr2L 8695816 intron Hnf4 - chr2L 8695908 intron Hnf4 - chr2L 8696001 intron Hnf4 - chr2L_8_8695001 chr2L_8695001 KN35_1-HE 263 chr2L 8716885 8716905 chr2L 8716974 8716994 8 89 7.0 0.0 3.5 1.8 109 chr2L 8716885 intron raw - chr2L 8716940 intron raw - chr2L 8716994 intron raw - chr2L_8_8715001 chr2L_8715001 KN35_1-HE 264 chr2L 8719202 8719236 chr2L 8719279 8719313 16 77 3.5 3.0 3.2 3.8 111 chr2L 8719202 intron raw - chr2L 8719258 intron raw - chr2L 8719313 intron raw - chr2L_16_8715001 chr2L_8715001 KN35_1-HE 265 chr2L 8723114 8723146 chr2L 8731492 8731524 Tirant 17 8378 5.5 5.5 5.5 2.6 8410 chr2L 8723114 intron raw - chr2L 8727319 intron raw - chr2L 8731524 intron raw - chr2L_17_8725001 chr2L_8725001 KN35_1-HE 266 chr2L 8799639 8799659 chr2L 8800226 8800246 17 587 2.0 5.0 3.5 3.8 607 chr2L 8799639 intergenic not near genes chr2L 8799942 intergenic not near genes chr2L 8800246 intergenic not near genes chr2L_17_8795001 chr2L_8795001 KN35_1-HE 267 chr2L 8826168 8826195 chr2L 8826259 8826286 16 90 7.5 4.0 5.8 2.4 118 chr2L 8826168 5` UTR SoxN + chr2L 8826227 5` UTR SoxN + chr2L 8826286 5` UTR SoxN + chr2L_16_8825001 chr2L_8825001 KN35_1-HE 268 chr2L 8875447 8875465 chr2L 8875526 8875544 4 79 3.0 7.0 5.0 0.7 97 chr2L 8875447 intergenic not near genes chr2L 8875496 intergenic not near genes chr2L 8875544 intergenic not near genes chr2L_4_8875001 chr2L_8875001 KN35_1-HE 269 chr2L 8899243 8899278 chr2L 8899321 8899353 17 78 3.0 6.5 4.8 2.9 110 chr2L 8899243 5` UTR CG34398 + chr2L 8899298 5` UTR CG34398 + chr2L 8899353 5` UTR CG34398 + chr2L_17_8895001 chr2L_8895001 KN35_1-HE 270 chr2L 8939665 8939698 chr2L 8939746 8939779 12 81 2.0 6.5 4.2 2.3 114 chr2L 8939665 3` UTR Tsp29Fb + chr2L 8939722 3` UTR Tsp29Fb + chr2L 8939779 intergenic CG9510 -,Tsp29Fb + chr2L_12_8935001 chr2L_8935001 KN35_1-HE 271 chr2L 8956233 8956243 chr2L 8956311 8956321 7 78 3.0 0.0 1.5 2.8 88 chr2L 8956233 intron CG31886 - chr2L 8956277 intron CG31886 - chr2L 8956321 intron CG31886 - chr2L_7_8955001 chr2L_8955001 KN35_1-HE 272 chr2L 8976486 8976496 chr2L 8976569 8976579 4 83 4.5 1.5 3.0 1.0 93 chr2L 8976486 intergenic not near genes chr2L 8976532 intergenic not near genes chr2L 8976579 intergenic not near genes chr2L_4_8975001 chr2L_8975001 KN35_1-HE 273 chr2L 9000278 9000308 chr2L 9007789 9007819 roo 11 7511 4.0 4.0 4.0 2.2 7541 chr2L 9000278 intergenic Try29F + chr2L 9004048 intergenic not near genes chr2L 9007819 intergenic not near genes chr2L_11_9000001 chr2L_9000001 KN35_1-HE 274 chr2L 9030280 9030482 chr2L 9030360 9030562 29 80 5.5 2.0 3.8 6.0 282 chr2L 9030280 intron,intron CG9582 -,CR44352 - chr2L 9030421 intron,intron CG9582 -,CR44352 - chr2L 9030562 intron,intron CG9582 -,CR44352 - chr2L_29_9030001 chr2L_9030001 KN35_1-HE 275 chr2L 9031977 9032009 chr2L 9032062 9032094 8 85 6.0 4.0 5.0 1.3 117 chr2L 9031977 intergenic CG9582 -,CR44352 - chr2L 9032036 intergenic CG9582 -,CR44352 - chr2L 9032094 intergenic CG9582 -,CR44352 - chr2L_8_9030001 chr2L_9030001 KN35_1-HE 276 chr2L 9040028 9040055 chr2L 9040116 9040143 9 88 6.5 4.5 5.5 1.4 115 chr2L 9040028 intergenic not near genes chr2L 9040086 intergenic not near genes chr2L 9040143 intergenic not near genes chr2L_9_9040001 chr2L_9040001 KN35_1-HE 277 chr2L 9040884 9040914 chr2L 9040961 9040991 12 77 3.5 5.0 4.2 2.3 107 chr2L 9040884 intergenic not near genes chr2L 9040938 intergenic not near genes chr2L 9040991 intergenic not near genes chr2L_12_9040001 chr2L_9040001 KN35_1-HE 278 chr2L 9053393 9053423 chr2L 9053474 9053504 16 81 4.5 0.0 2.2 5.0 111 chr2L 9053393 exon CG31708 - chr2L 9053448 intron CG31708 - chr2L 9053504 intron CG31708 - chr2L_16_9050001 chr2L_9050001 KN35_1-HE 279 chr2L 9073272 9073296 chr2L 9073355 9073383 16 87 0.0 4.0 2.0 5.3 111 chr2L 9073272 intergenic not near genes chr2L 9073328 intergenic not near genes chr2L 9073383 intergenic not near genes chr2L_16_9070001 chr2L_9070001 KN35_1-HE 280 chr2L 9095573 9095605 chr2L 9095660 9095693 12 87 3.0 4.5 3.8 2.5 120 chr2L 9095573 intergenic not near genes chr2L 9095633 intergenic not near genes chr2L 9095693 intergenic not near genes chr2L_12_9095001 chr2L_9095001 KN35_1-HE 281 chr2L 9128837 9128873 chr2L 9128926 9128962 19 89 5.5 5.5 5.5 2.9 125 chr2L 9128837 intron CG32982 + chr2L 9128900 intron CG32982 + chr2L 9128962 intron CG32982 + chr2L_19_9125001 chr2L_9125001 KN35_1-HE 282 chr2L 9142677 9142691 chr2L 9142852 9142866 8 175 4.5 2.5 3.5 1.8 189 chr2L 9142677 intron CG32982 + chr2L 9142772 intron CG32982 + chr2L 9142866 intron CG32982 + chr2L_8_9140001 chr2L_9140001 KN35_1-HE 283 chr2L 9169306 9169314 chr2L 9169388 9169396 5 82 4.5 7.5 6.0 0.7 90 chr2L 9169306 intron tai + chr2L 9169351 intron tai + chr2L 9169396 intron tai + chr2L_5_9165001 chr2L_9165001 KN35_1-HE 284 chr2L 9259214 9259247 chr2L 9259308 9259340 11 94 3.0 3.5 3.2 2.6 126 chr2L 9259214 intron Ggamma30A + chr2L 9259277 intron Ggamma30A + chr2L 9259340 intron Ggamma30A + chr2L_11_9255001 chr2L_9255001 KN35_1-HE 285 chr2L 9261840 9261850 chr2L 9261937 9261947 6 97 9.0 9.0 9.0 0.6 107 chr2L 9261840 intron,3` UTR Ggamma30A +,CR45262 - chr2L 9261894 intron,3` UTR Ggamma30A +,CR45262 - chr2L 9261947 intron,3` UTR Ggamma30A +,CR45262 - chr2L_6_9260001 chr2L_9260001 KN35_1-HE 286 chr2L 9297379 9297394 chr2L 9297457 9297472 8 78 6.5 10.0 8.2 0.9 93 chr2L 9297379 3` UTR Ggamma30A + chr2L 9297426 3` UTR Ggamma30A + chr2L 9297472 3` UTR Ggamma30A + chr2L_8_9295001 chr2L_9295001 KN35_1-HE 287 chr2L 9300687 9300700 chr2L 9300784 9300797 9 97 5.0 0.0 2.5 2.6 110 chr2L 9300687 3` UTR Ggamma30A + chr2L 9300742 3` UTR Ggamma30A + chr2L 9300797 3` UTR Ggamma30A + chr2L_9_9300001 chr2L_9300001 KN35_1-HE 288 chr2L 9322815 9322972 chr2L 9322892 9323097 24 103 6.5 6.0 6.2 3.3 282 chr2L 9322815 intergenic not near genes chr2L 9322956 intergenic not near genes chr2L 9323097 intergenic not near genes chr2L_24_9320001 chr2L_9320001 KN35_1-HE 289 chr2L 9362145 9362152 chr2L 9362224 9362231 7 79 4.0 7.5 5.8 1.0 86 chr2L 9362145 intergenic not near genes chr2L 9362188 intergenic not near genes chr2L 9362231 intergenic not near genes chr2L_7_9360001 chr2L_9360001 KN35_1-HE 290 chr2L 9363307 9363337 chr2L 9363428 9363458 18 121 5.0 0.0 2.5 5.1 151 chr2L 9363307 intergenic not near genes chr2L 9363382 intergenic not near genes chr2L 9363458 intergenic not near genes chr2L_18_9360001 chr2L_9360001 KN35_1-HE 291 chr2L 9380244 9380254 chr2L 9380340 9380350 8 96 6.5 5.5 6.0 1.1 106 chr2L 9380244 exon Shawl - chr2L 9380297 intron Shawl - chr2L 9380350 intron Shawl - chr2L_8_9380001 chr2L_9380001 KN35_1-HE 292 chr2L 9387252 9387481 chr2L 9387351 9387567 16 90 2.5 7.5 5.0 2.7 315 chr2L 9387252 intron Shawl - chr2L 9387410 intron,5` UTR Shawl -,Aldh + chr2L 9387567 intron,5` UTR Shawl -,Aldh + chr2L_16_9385001 chr2L_9385001 KN35_1-HE 293 chr2L 9393496 9393529 chr2L 9396464 9396497 jockey 23 2968 4.5 7.0 5.8 3.4 3001 chr2L 9393496 intron Shawl - chr2L 9394996 intron Shawl - chr2L 9396497 intron Shawl - chr2L_23_9390001 chr2L_9390001 KN35_1-HE 294 chr2L 9448909 9448929 chr2L 9448997 9449017 6 88 0.0 2.0 1.0 3.0 108 chr2L 9448909 intron numb + chr2L 9448963 intron numb + chr2L 9449017 intron numb + chr2L_6_9445001 chr2L_9445001 KN35_1-HE 295 chr2L 9474783 9474809 chr2L 9474878 9474904 8 95 0.0 3.0 1.5 3.2 121 chr2L 9474783 intergenic not near genes chr2L 9474844 intergenic not near genes chr2L 9474904 intergenic not near genes chr2L_8_9470001 chr2L_9470001 KN35_1-HE 296 chr2L 9490520 9490548 chr2L 9490601 9490629 8 81 4.5 6.5 5.5 1.2 109 chr2L 9490520 intergenic not near genes chr2L 9490574 intergenic not near genes chr2L 9490629 intergenic not near genes chr2L_8_9490001 chr2L_9490001 KN35_1-HE 297 chr2L 9492521 9492557 chr2L 9492602 9492638 20 81 6.5 6.5 6.5 2.7 117 chr2L 9492521 exon Gdi - chr2L 9492580 intron Gdi - chr2L 9492638 exon Gdi - chr2L_20_9490001 chr2L_9490001 KN35_1-HE 298 chr2L 9526853 9526870 chr2L 9526946 9526963 9 93 3.5 4.5 4.0 1.8 110 chr2L 9526853 intron Oatp30B + chr2L 9526908 intron Oatp30B + chr2L 9526963 intron Oatp30B + chr2L_9_9525001 chr2L_9525001 KN35_1-HE 299 chr2L 9672069 9672073 chr2L 9672155 9672159 4 86 3.0 0.0 1.5 1.6 90 chr2L 9672069 intergenic not near genes chr2L 9672114 intergenic not near genes chr2L 9672159 intergenic not near genes chr2L_4_9670001 chr2L_9670001 KN35_1-HE 300 chr2L 9832880 9832918 chr2L 9832981 9833019 23 101 5.5 4.0 4.8 4.0 139 chr2L 9832880 intron nAChRalpha6 - chr2L 9832950 intron nAChRalpha6 - chr2L 9833019 intron nAChRalpha6 - chr2L_23_9830001 chr2L_9830001 KN35_1-HE 301 chr2L 9836398 9836434 chr2L 9836479 9836515 13 81 8.5 3.0 5.8 1.9 117 chr2L 9836398 intron nAChRalpha6 - chr2L 9836456 intron nAChRalpha6 - chr2L 9836515 intron nAChRalpha6 - chr2L_13_9835001 chr2L_9835001 KN35_1-HE 302 chr2L 9862348 9862358 chr2L 9862457 9862467 7 109 0.0 11.5 5.8 1.0 119 chr2L 9862348 intron nAChRalpha6 - chr2L 9862408 intron nAChRalpha6 - chr2L 9862467 intron nAChRalpha6 - chr2L_7_9860001 chr2L_9860001 KN35_1-HE 303 chr2L 9973725 9973759 chr2L 9980845 9980879 HMS-Beagle 14 7120 4.0 7.5 5.8 2.1 7154 chr2L 9973725 intergenic not near genes chr2L 9977302 intergenic not near genes chr2L 9980879 intergenic not near genes chr2L_14_9975001 chr2L_9975001 KN35_1-HE 304 chr2L 9982202 9982231 chr2L 9982306 9982335 6 104 0.0 3.5 1.8 2.1 133 chr2L 9982202 intergenic not near genes chr2L 9982268 intergenic not near genes chr2L 9982335 intergenic not near genes chr2L_6_9980001 chr2L_9980001 KN35_1-HE 305 chr2L 10051724 10051749 chr2L 10051810 10051835 18 86 2.0 4.0 3.0 4.5 111 chr2L 10051724 5` UTR CR44874 + chr2L 10051780 5` UTR CR44874 + chr2L 10051835 5` UTR CR44874 + chr2L_18_10050001 chr2L_10050001 KN35_1-HE 306 chr2L 10119060 10119073 chr2L 10119153 10119166 7 93 0.5 4.0 2.2 2.2 106 chr2L 10119060 intron,intron CG44153 -,CG34109 + chr2L 10119113 intron,intron CG44153 -,CG34109 + chr2L 10119166 intron,intron CG44153 -,CG34109 + chr2L_7_10115001 chr2L_10115001 KN35_1-HE 307 chr2L 10153202 10153238 chr2L 10153280 10153318 25 80 5.0 5.5 5.2 4.0 116 chr2L 10153202 intron,exon CG44153 -,CG4839 + chr2L 10153260 intron,intron CG44153 -,CG4839 + chr2L 10153318 intron,intron CG44153 -,CG4839 + chr2L_25_10150001 chr2L_10150001 KN35_1-HE 308 chr2L 10156321 10156355 chr2L 10163792 10163826 blood 16 7470 2.0 4.0 3.0 4.0 7505 chr2L 10156321 intron,3` UTR CG44153 -,CG4839 + chr2L 10160074 intron CG44153 - chr2L 10163826 intron CG44153 - chr2L_16_10160001 chr2L_10160001 KN35_1-HE 309 chr2L 10232909 10232945 chr2L 10232988 10233024 7 79 5.0 4.5 4.8 1.2 115 chr2L 10232909 intron eEF1delta + chr2L 10232966 intron eEF1delta + chr2L 10233024 intron eEF1delta + chr2L_7_10230001 chr2L_10230001 KN35_1-HE 310 chr2L 10322179 10322216 chr2L 10322263 10322300 20 84 2.5 5.0 3.8 4.2 121 chr2L 10322179 intron CG5381 - chr2L 10322240 intron CG5381 - chr2L 10322300 intron CG5381 - chr2L_20_10320001 chr2L_10320001 KN35_1-HE 311 chr2L 10407743 10407769 chr2L 10407825 10407851 6 82 2.5 4.0 3.2 1.4 108 chr2L 10407743 intron Ir31a + chr2L 10407797 intron Ir31a + chr2L 10407851 exon Ir31a + chr2L_6_10405001 chr2L_10405001 KN35_1-HE 312 chr2L 10500056 10500082 chr2L 10500143 10500169 6 87 2.5 2.5 2.5 1.7 113 chr2L 10500056 intron Myo31DF - chr2L 10500112 intron Myo31DF - chr2L 10500169 intron Myo31DF - chr2L_6_10500001 chr2L_10500001 KN35_1-HE 313 chr2L 10550826 10550862 chr2L 10550903 10550939 18 77 2.5 2.0 2.2 5.6 113 chr2L 10550826 intron Trim9 + chr2L 10550882 intron Trim9 + chr2L 10550939 intron Trim9 + chr2L_18_10550001 chr2L_10550001 KN35_1-HE 314 chr2L 10574567 10574600 chr2L 10574665 10574698 16 98 3.5 3.5 3.5 3.6 131 chr2L 10574567 intron Trim9 + chr2L 10574632 intron Trim9 + chr2L 10574698 intron Trim9 + chr2L_16_10570001 chr2L_10570001 KN35_1-HE 315 chr2L 10580943 10580971 chr2L 10581055 10581083 11 112 0.0 5.5 2.8 2.9 140 chr2L 10580943 intron Trim9 + chr2L 10581013 intron,3` UTR Trim9 +,CG34161 - chr2L 10581083 intron,3` UTR Trim9 +,CG34161 - chr2L_11_10580001 chr2L_10580001 KN35_1-HE 316 chr2L 10589069 10589081 chr2L 10589146 10589158 12 77 3.0 3.0 3.0 3.0 89 chr2L 10589069 intron Trim9 + chr2L 10589114 intron Trim9 + chr2L 10589158 intron Trim9 + chr2L_12_10585001 chr2L_10585001 KN35_1-HE 317 chr2L 10592839 10592873 chr2L 10600502 10600536 opus 13 7663 7.0 5.5 6.2 1.8 7697 chr2L 10592839 intron Trim9 + chr2L 10596688 intron Trim9 + chr2L 10600536 intron Trim9 + chr2L_13_10595001 chr2L_10595001 KN35_1-HE 318 chr2L 10604194 10604221 chr2L 10604279 10604304 7 85 6.5 0.0 3.2 1.7 110 chr2L 10604194 intron Trim9 + chr2L 10604249 intron Trim9 + chr2L 10604304 intron Trim9 + chr2L_7_10600001 chr2L_10600001 KN35_1-HE 319 chr2L 10656591 10656609 chr2L 10656668 10656686 5 77 1.5 3.0 2.2 1.6 95 chr2L 10656591 intergenic not near genes chr2L 10656638 intergenic not near genes chr2L 10656686 intergenic not near genes chr2L_5_10655001 chr2L_10655001 KN35_1-HE 320 chr2L 10665747 10665773 chr2L 10665824 10665850 13 77 8.0 5.5 6.8 1.7 103 chr2L 10665747 intron CG31871 + chr2L 10665798 intron CG31871 + chr2L 10665850 intron CG31871 + chr2L_13_10665001 chr2L_10665001 KN35_1-HE 321 chr2L 10679059 10679067 chr2L 10679149 10679157 8 90 10.5 9.5 10.0 0.7 98 chr2L 10679059 exon CG17104 + chr2L 10679108 exon CG17104 + chr2L 10679157 exon CG17104 + chr2L_8_10675001 chr2L_10675001 KN35_1-HE 322 chr2L 10682035 10682047 chr2L 10682134 10682146 4 99 12.0 3.5 7.8 0.5 111 chr2L 10682035 exon CG17107 + chr2L 10682090 exon CG17107 + chr2L 10682146 exon CG17107 + chr2L_4_10680001 chr2L_10680001 KN35_1-HE 323 chr2L 10701903 10701939 chr2L 10702056 10702092 12 153 1.5 4.5 3.0 3.0 189 chr2L 10701903 intergenic Lip2 -,Lip1 - chr2L 10701998 3` UTR Lip2 - chr2L 10702092 3` UTR Lip2 - chr2L_12_10700001 chr2L_10700001 KN35_1-HE 324 chr2L 10705448 10705478 chr2L 10705532 10705562 7 82 2.5 3.5 3.0 1.8 114 chr2L 10705448 exon Lip2 - chr2L 10705505 intron Lip2 - chr2L 10705562 intron Lip2 - chr2L_7_10705001 chr2L_10705001 KN35_1-HE 325 chr2L 10707667 10707695 chr2L 10707749 10707777 12 82 1.0 2.5 1.8 4.3 110 chr2L 10707667 intron Lip2 - chr2L 10707722 intron Lip2 - chr2L 10707777 intron Lip2 - chr2L_12_10705001 chr2L_10705001 KN35_1-HE 326 chr2L 10716693 10716728 chr2L 10716813 10716848 17 120 0.0 5.0 2.5 4.9 155 chr2L 10716693 intergenic not near genes chr2L 10716770 intergenic not near genes chr2L 10716848 intergenic not near genes chr2L_17_10715001 chr2L_10715001 KN35_1-HE 327 chr2L 10719893 10719903 chr2L 10720007 10720011 4 112 10.5 5.0 7.8 0.5 118 chr2L 10719893 intergenic not near genes chr2L 10719952 intergenic not near genes chr2L 10720011 intergenic not near genes chr2L_4_10715001 chr2L_10715001 KN35_1-HE 328 chr2L 10727288 10727308 chr2L 10727400 10727420 6 112 0.5 0.0 0.2 5.0 132 chr2L 10727288 intron CG6431 + chr2L 10727354 intron CG6431 + chr2L 10727420 intron CG6431 + chr2L_6_10725001 chr2L_10725001 KN35_1-HE 329 chr2L 10749208 10749236 chr2L 10749284 10749313 9 77 3.0 2.5 2.8 2.4 105 chr2L 10749208 intron CG17124 - chr2L 10749260 intron CG17124 - chr2L 10749313 intron CG17124 - chr2L_9_10745001 chr2L_10745001 KN35_1-HE 330 chr2L 10821200 10821228 chr2L 10821590 10821608 7 382 5.5 8.5 7.0 0.9 408 chr2L 10821200 intron,exon Nos -,CG17134 + chr2L 10821404 intron,exon Nos -,CG17134 + chr2L 10821608 intron,exon Nos -,CG17134 + chr2L_7_10820001 chr2L_10820001 KN35_1-HE 331 chr2L 10823585 10823618 chr2L 10823760 10823793 12 175 26.5 22.0 24.2 0.5 208 chr2L 10823585 intron Nos - chr2L 10823689 intron Nos - chr2L 10823793 exon Nos - chr2L_12_10820001 chr2L_10820001 KN35_1-HE 332 chr2L 10836758 10836764 chr2L 10836838 10836844 4 80 2.5 4.0 3.2 1.0 86 chr2L 10836758 intron Nos - chr2L 10836801 intron Nos - chr2L 10836844 intron Nos - chr2L_4_10835001 chr2L_10835001 KN35_1-HE 333 chr2L 10852167 10852182 chr2L 10852257 10852272 8 90 10.5 10.0 10.2 0.7 105 chr2L 10852167 intron CG43129 + chr2L 10852220 intron CG43129 + chr2L 10852272 intron CG43129 + chr2L_8_10850001 chr2L_10850001 KN35_1-HE 334 chr2L 10861522 10861531 chr2L 10861603 10861612 5 80 4.5 2.5 3.5 1.1 90 chr2L 10861522 3` UTR Stam + chr2L 10861567 3` UTR Stam + chr2L 10861612 3` UTR Stam + chr2L_5_10860001 chr2L_10860001 KN35_1-HE 335 chr2L 10862837 10862858 chr2L 10864450 10864473 Rt1c 5 1615 2.0 2.5 2.2 1.6 1636 chr2L 10862837 3` UTR CR43807 - chr2L 10863655 intron CR43807 - chr2L 10864473 3` UTR CR43807 - chr2L_5_10860001 chr2L_10860001 KN35_1-HE 336 chr2L 10946949 10946975 chr2L 10956165 10956191 roo 13 9216 7.0 7.0 7.0 1.6 9242 chr2L 10946949 intron dpr2 - chr2L 10951570 intron dpr2 - chr2L 10956191 intron dpr2 - chr2L_13_10950001 chr2L_10950001 KN35_1-HE 337 chr2L 11051763 11051788 chr2L 11051850 11051875 5 87 6.0 3.5 4.8 0.9 112 chr2L 11051763 intron Samuel - chr2L 11051819 intron Samuel - chr2L 11051875 intron Samuel - chr2L_5_11050001 chr2L_11050001 KN35_1-HE 338 chr2L 11169502 11169522 chr2L 11169603 11169623 10 101 5.5 5.0 5.2 1.6 121 chr2L 11169502 intron Ca-beta - chr2L 11169562 intron Ca-beta - chr2L 11169623 intron Ca-beta - chr2L_10_11165001 chr2L_11165001 KN35_1-HE 339 chr2L 11174643 11174659 chr2L 11174721 11174737 8 78 0.0 7.0 3.5 1.8 94 chr2L 11174643 intron Ca-beta - chr2L 11174690 intron Ca-beta - chr2L 11174737 intron Ca-beta - chr2L_8_11170001 chr2L_11170001 KN35_1-HE 340 chr2L 11193583 11193595 chr2L 11193678 11193690 11 95 0.0 16.0 8.0 1.2 107 chr2L 11193583 intron Ca-beta - chr2L 11193636 intron Ca-beta - chr2L 11193690 intron Ca-beta - chr2L_11_11190001 chr2L_11190001 KN35_1-HE 341 chr2L 11201694 11201696 chr2L 11201774 11201776 4 80 6.5 0.0 3.2 1.0 82 chr2L 11201694 intron Ca-beta - chr2L 11201735 intron Ca-beta - chr2L 11201776 intron Ca-beta - chr2L_4_11200001 chr2L_11200001 KN35_1-HE 342 chr2L 11204529 11204551 chr2L 11204616 11204638 14 87 4.0 6.0 5.0 2.3 109 chr2L 11204529 intergenic not near genes chr2L 11204584 intergenic not near genes chr2L 11204638 intergenic not near genes chr2L_14_11200001 chr2L_11200001 KN35_1-HE 343 chr2L 11205463 11205495 chr2L 11205604 11205636 16 141 7.0 5.0 6.0 2.3 173 chr2L 11205463 intergenic CR43859 - chr2L 11205550 3` UTR CR43859 - chr2L 11205636 3` UTR CR43859 - chr2L_16_11205001 chr2L_11205001 KN35_1-HE 344 chr2L 11224054 11224091 chr2L 11224166 11224203 14 112 4.5 4.5 4.5 2.5 149 chr2L 11224054 intron ab + chr2L 11224128 intron ab + chr2L 11224203 intron ab + chr2L_14_11220001 chr2L_11220001 KN35_1-HE 345 chr2L 11292377 11292404 chr2L 11292460 11292487 7 83 3.5 3.5 3.5 1.6 110 chr2L 11292377 intergenic not near genes chr2L 11292432 intergenic not near genes chr2L 11292487 intergenic not near genes chr2L_7_11290001 chr2L_11290001 KN35_1-HE 346 chr2L 11390719 11390757 chr2L 11390823 11390861 41 104 5.5 9.0 7.2 5.0 142 chr2L 11390719 3` UTR CR43681 - chr2L 11390790 3` UTR CR43681 - chr2L 11390861 3` UTR CR43681 - chr2L_41_11390001 chr2L_11390001 KN35_1-HE 347 chr2L 11391593 11391604 chr2L 11391672 11391683 10 79 16.0 5.5 10.8 0.8 90 chr2L 11391593 intron CR43681 - chr2L 11391638 intron CR43681 - chr2L 11391683 intron CR43681 - chr2L_10_11390001 chr2L_11390001 KN35_1-HE 348 chr2L 11413349 11413379 chr2L 11413432 11413462 14 83 2.5 2.5 2.5 4.0 113 chr2L 11413349 intergenic not near genes chr2L 11413406 intergenic not near genes chr2L 11413462 intergenic not near genes chr2L_14_11410001 chr2L_11410001 KN35_1-HE 349 chr2L 11418658 11418687 chr2L 11418738 11418767 14 80 3.0 4.5 3.8 2.9 109 chr2L 11418658 intergenic not near genes chr2L 11418712 intergenic not near genes chr2L 11418767 intergenic not near genes chr2L_14_11415001 chr2L_11415001 KN35_1-HE 350 chr2L 11450121 11450153 chr2L 11450208 11450236 9 84 0.0 7.0 3.5 2.0 115 chr2L 11450121 intergenic not near genes chr2L 11450178 intergenic not near genes chr2L 11450236 intergenic not near genes chr2L_9_11450001 chr2L_11450001 KN35_1-HE 351 chr2L 11458926 11458935 chr2L 11459104 11459113 4 178 3.0 0.0 1.5 1.6 187 chr2L 11458926 intergenic not near genes chr2L 11459020 intergenic not near genes chr2L 11459113 intergenic not near genes chr2L_4_11455001 chr2L_11455001 KN35_1-HE 352 chr2L 11517092 11517114 chr2L 11517184 11517206 9 92 3.5 2.5 3.0 2.2 114 chr2L 11517092 intergenic CG6509 -,CG4970 + chr2L 11517149 intergenic CG6509 -,CG4970 + chr2L 11517206 intergenic CG6509 -,CG4970 + chr2L_9_11515001 chr2L_11515001 KN35_1-HE 353 chr2L 11536981 11537014 chr2L 11537279 11537312 11 298 3.5 3.0 3.2 2.6 331 chr2L 11536981 intergenic CG43438 + chr2L 11537146 intergenic CG43438 + chr2L 11537312 intergenic CG43438 + chr2L_11_11535001 chr2L_11535001 KN35_1-HE 354 chr2L 11540596 11540616 chr2L 11547999 11548019 Tabor 9 7403 1.5 4.5 3.0 2.2 7423 chr2L 11540596 intergenic not near genes chr2L 11544308 intergenic not near genes chr2L 11548019 intergenic not near genes chr2L_9_11540001 chr2L_11540001 KN35_1-HE 355 chr2L 11563635 11563649 chr2L 11568840 11568854 copia 9 5205 9.5 1.0 5.2 1.5 5219 chr2L 11563635 intergenic not near genes chr2L 11566244 intergenic not near genes chr2L 11568854 intergenic not near genes chr2L_9_11565001 chr2L_11565001 KN35_1-HE 356 chr2L 11591427 11591459 chr2L 11591515 11591547 11 88 5.5 2.5 4.0 2.2 120 chr2L 11591427 intron,3` UTR kek2 +,Acp33A - chr2L 11591487 intron,3` UTR kek2 +,Acp33A - chr2L 11591547 intron,exon kek2 +,Acp33A - chr2L_11_11590001 chr2L_11590001 KN35_1-HE 357 chr2L 11614056 11614084 chr2L 11615552 11615580 hopper2 8 1495 3.5 4.0 3.8 1.7 1524 chr2L 11614056 intron kek2 + chr2L 11614818 intron kek2 + chr2L 11615580 intron kek2 + chr2L_8_11610001 chr2L_11610001 KN35_1-HE 358 chr2L 11633165 11633199 chr2L 11633268 11633302 13 103 3.5 3.5 3.5 2.9 137 chr2L 11633165 intergenic not near genes chr2L 11633234 intergenic not near genes chr2L 11633302 intergenic not near genes chr2L_13_11630001 chr2L_11630001 KN35_1-HE 359 chr2L 11654645 11654674 chr2L 11654727 11654756 10 82 4.5 1.0 2.8 2.6 111 chr2L 11654645 intergenic CG4983 + chr2L 11654700 intergenic not near genes chr2L 11654756 intergenic not near genes chr2L_10_11650001 chr2L_11650001 KN35_1-HE 360 chr2L 11713507 11713534 chr2L 11720976 11721003 blood 13 7469 3.0 4.5 3.8 2.7 7496 chr2L 11713507 intergenic not near genes chr2L 11717255 intergenic not near genes chr2L 11721003 intergenic CR44143 + chr2L_13_11715001 chr2L_11715001 KN35_1-HE 361 chr2L 11726811 11726828 chr2L 11726886 11726896 11 75 4.5 3.0 3.8 2.3 85 chr2L 11726811 intergenic not near genes chr2L 11726854 intergenic not near genes chr2L 11726896 intergenic not near genes chr2L_11_11725001 chr2L_11725001 KN35_1-HE 362 chr2L 11752873 11752893 chr2L 11753156 11753184 12 290 6.0 6.0 6.0 1.7 311 chr2L 11752873 intergenic CG42470 - chr2L 11753028 3` UTR CG42470 - chr2L 11753184 3` UTR CG42470 - chr2L_12_11750001 chr2L_11750001 KN35_1-HE 363 chr2L 11772258 11772289 chr2L 11772374 11772405 13 115 1.5 5.5 3.5 2.9 147 chr2L 11772258 intergenic not near genes chr2L 11772332 intergenic not near genes chr2L 11772405 intergenic not near genes chr2L_13_11770001 chr2L_11770001 KN35_1-HE 364 chr2L 11825699 11825710 chr2L 11825779 11825790 9 80 2.5 0.0 1.2 4.1 91 chr2L 11825699 intron Pde1c - chr2L 11825744 intron Pde1c - chr2L 11825790 intron Pde1c - chr2L_9_11825001 chr2L_11825001 KN35_1-HE 365 chr2L 11841364 11841393 chr2L 11841443 11841472 9 79 5.5 1.0 3.2 2.1 108 chr2L 11841364 intron Pde1c - chr2L 11841418 intron Pde1c - chr2L 11841472 intron Pde1c - chr2L_9_11840001 chr2L_11840001 KN35_1-HE 366 chr2L 11892544 11892551 chr2L 11892634 11892641 5 90 6.5 5.0 5.8 0.7 97 chr2L 11892544 intron Pde1c - chr2L 11892592 intron Pde1c - chr2L 11892641 intron Pde1c - chr2L_5_11890001 chr2L_11890001 KN35_1-HE 367 chr2L 11910576 11910611 chr2L 11910878 11910913 11 302 2.0 4.0 3.0 2.8 337 chr2L 11910576 intron Pde1c - chr2L 11910744 intron Pde1c - chr2L 11910913 intron Pde1c - chr2L_11_11910001 chr2L_11910001 KN35_1-HE 368 chr2L 11951339 11951360 chr2L 11951437 11951458 10 98 5.0 2.0 3.5 2.2 119 chr2L 11951339 intergenic not near genes chr2L 11951398 intergenic not near genes chr2L 11951458 intergenic not near genes chr2L_10_11950001 chr2L_11950001 KN35_1-HE 369 chr2L 12067327 12067359 chr2L 12074380 12074412 297 17 7053 6.0 4.0 5.0 2.8 7085 chr2L 12067327 intergenic not near genes chr2L 12070870 intergenic not near genes chr2L 12074412 intergenic not near genes chr2L_17_12070001 chr2L_12070001 KN35_1-HE 370 chr2L 12124328 12124360 chr2L 12124410 12124442 9 82 5.0 6.5 5.8 1.3 114 chr2L 12124328 intron CG17211 + chr2L 12124385 intron CG17211 + chr2L 12124442 intron CG17211 + chr2L_9_12120001 chr2L_12120001 KN35_1-HE 371 chr2L 12131467 12131496 chr2L 12131564 12131593 16 97 4.5 6.0 5.2 2.6 126 chr2L 12131467 intron rho-6 - chr2L 12131530 intron rho-6 - chr2L 12131593 intron rho-6 - chr2L_16_12130001 chr2L_12130001 KN35_1-HE 372 chr2L 12132735 12132751 chr2L 12132822 12132838 4 87 1.5 3.5 2.5 1.1 103 chr2L 12132735 intron rho-6 - chr2L 12132786 intron rho-6 - chr2L 12132838 intron rho-6 - chr2L_4_12130001 chr2L_12130001 KN35_1-HE 373 chr2L 12141176 12141202 chr2L 12141273 12141299 5 97 2.5 0.0 1.2 2.3 123 chr2L 12141176 intergenic not near genes chr2L 12141238 intergenic not near genes chr2L 12141299 intergenic not near genes chr2L_5_12140001 chr2L_12140001 KN35_1-HE 374 chr2L 12185018 12185051 chr2L 12185230 12185263 30 212 6.5 8.5 7.5 3.5 245 chr2L 12185018 intron aret + chr2L 12185140 intron aret + chr2L 12185263 intron aret + chr2L_30_12185001 chr2L_12185001 KN35_1-HE 375 chr2L 12191632 12191638 chr2L 12191857 12191863 6 225 6.5 4.0 5.2 1.0 231 chr2L 12191632 intron aret + chr2L 12191748 intron aret + chr2L 12191863 intron aret + chr2L_6_12190001 chr2L_12190001 KN35_1-HE 376 chr2L 12232651 12232661 chr2L 12233813 12233823 9 1162 9.5 0.0 4.8 1.6 1172 chr2L 12232651 intron aret + chr2L 12233237 intron aret + chr2L 12233823 intron aret + chr2L_9_12230001 chr2L_12230001 KN35_1-HE 377 chr2L 12260106 12260117 chr2L 12260190 12260201 9 84 6.5 11.0 8.8 0.9 95 chr2L 12260106 intron aret + chr2L 12260154 intron aret + chr2L 12260201 intron aret + chr2L_9_12260001 chr2L_12260001 KN35_1-HE 378 chr2L 12264638 12264662 chr2L 12264730 12264754 12 92 0.0 7.0 3.5 2.7 116 chr2L 12264638 intron aret + chr2L 12264696 intron aret + chr2L 12264754 intron aret + chr2L_12_12260001 chr2L_12260001 KN35_1-HE 379 chr2L 12269840 12269874 chr2L 12270056 12270090 17 216 3.5 4.0 3.8 3.5 250 chr2L 12269840 intron aret + chr2L 12269965 intron aret + chr2L 12270090 intron aret + chr2L_17_12265001 chr2L_12265001 KN35_1-HE 380 chr2L 12272163 12272196 chr2L 12272240 12272273 21 77 5.0 4.0 4.5 3.8 110 chr2L 12272163 intron aret + chr2L 12272218 intron aret + chr2L 12272273 intron aret + chr2L_21_12270001 chr2L_12270001 KN35_1-HE 381 chr2L 12278940 12278960 chr2L 12279021 12279041 11 81 6.5 8.0 7.2 1.3 101 chr2L 12278940 intron aret + chr2L 12278990 intron aret + chr2L 12279041 intron aret + chr2L_11_12275001 chr2L_12275001 KN35_1-HE 382 chr2L 12299610 12299646 chr2L 12299688 12299724 24 78 6.0 3.0 4.5 4.4 114 chr2L 12299610 intron aret + chr2L 12299667 intron aret + chr2L 12299724 intron aret + chr2L_24_12295001 chr2L_12295001 KN35_1-HE 383 chr2L 12337280 12337319 chr2L 12337369 12337405 20 89 5.5 0.0 2.8 5.3 125 chr2L 12337280 intergenic not near genes chr2L 12337342 intergenic not near genes chr2L 12337405 intergenic not near genes chr2L_20_12335001 chr2L_12335001 KN35_1-HE 384 chr2L 12452219 12452248 chr2L 12454104 12454133 11 1885 7.5 4.5 6.0 1.6 1914 chr2L 12452219 exon CG5418 - chr2L 12453176 exon CG5418 - chr2L 12454133 intergenic not near genes chr2L_11_12450001 chr2L_12450001 KN35_1-HE 385 chr2L 12485194 12485225 chr2L 12485283 12485314 11 89 3.5 8.0 5.8 1.6 120 chr2L 12485194 intron bun - chr2L 12485254 intron bun - chr2L 12485314 intron bun - chr2L_11_12485001 chr2L_12485001 KN35_1-HE 386 chr2L 12487891 12487918 chr2L 12487973 12488000 17 82 7.0 4.0 5.5 2.6 109 chr2L 12487891 intron bun - chr2L 12487946 intron bun - chr2L 12488000 intron bun - chr2L_17_12485001 chr2L_12485001 KN35_1-HE 387 chr2L 12490084 12490110 chr2L 12490224 12490250 9 140 2.5 7.0 4.8 1.6 166 chr2L 12490084 intron bun - chr2L 12490167 intron bun - chr2L 12490250 intron bun - chr2L_9_12490001 chr2L_12490001 KN35_1-HE 388 chr2L 12510133 12510137 chr2L 12510211 12510215 5 78 15.5 15.5 15.5 0.3 82 chr2L 12510133 intron bun - chr2L 12510174 intron bun - chr2L 12510215 intron bun - chr2L_5_12510001 chr2L_12510001 KN35_1-HE 389 chr2L 12510138 12510141 chr2L 12510210 12510219 4 76 14.5 15.5 15.0 0.2 81 chr2L 12510138 intron bun - chr2L 12510178 intron bun - chr2L 12510219 intron bun - chr2L_4_12510001 chr2L_12510001 KN35_1-HE 390 chr2L 12558326 12558351 chr2L 12565456 12565481 HMS-Beagle 12 7130 6.0 10.0 8.0 1.3 7155 chr2L 12558326 intergenic not near genes chr2L 12561904 intergenic not near genes chr2L 12565481 intergenic not near genes chr2L_12_12560001 chr2L_12560001 KN35_1-HE 391 chr2L 12598988 12598996 chr2L 12599071 12599079 5 83 0.0 15.5 7.8 0.6 91 chr2L 12598988 intron nub + chr2L 12599034 intron nub + chr2L 12599079 intron nub + chr2L_5_12595001 chr2L_12595001 KN35_1-HE 392 chr2L 12601770 12601798 chr2L 12601855 12601888 15 84 6.0 7.0 6.5 2.0 118 chr2L 12601770 intron nub + chr2L 12601829 intron nub + chr2L 12601888 intron nub + chr2L_15_12600001 chr2L_12600001 KN35_1-HE 393 chr2L 12653030 12653064 chr2L 12653108 12653142 22 78 3.5 8.5 6.0 3.1 112 chr2L 12653030 intergenic not near genes chr2L 12653086 intergenic not near genes chr2L 12653142 intergenic not near genes chr2L_22_12650001 chr2L_12650001 KN35_1-HE 394 chr2L 12677781 12677812 chr2L 12677863 12677894 13 82 6.5 1.5 4.0 2.6 113 chr2L 12677781 intron pdm2 + chr2L 12677838 intron pdm2 + chr2L 12677894 intron pdm2 + chr2L_13_12675001 chr2L_12675001 KN35_1-HE 395 chr2L 12693840 12693873 chr2L 12693918 12693951 20 78 2.0 0.0 1.0 10.0 111 chr2L 12693840 exon CG6153 + chr2L 12693896 3` UTR,3` UTR CG6153 +,CG5780 - chr2L 12693951 3` UTR CG5780 - chr2L_20_12690001 chr2L_12690001 KN35_1-HE 396 chr2L 12728922 12728946 chr2L 12729164 12729188 pogo 16 242 4.5 7.5 6.0 2.3 266 chr2L 12728922 intron MRP + chr2L 12729055 intron MRP + chr2L 12729188 exon MRP + chr2L_16_12725001 chr2L_12725001 KN35_1-HE 397 chr2L 12731053 12731092 chr2L 12735821 12735860 F-element 21 4768 1.5 6.0 3.8 4.4 4807 chr2L 12731053 intron MRP + chr2L 12733456 intron MRP + chr2L 12735860 intron MRP + chr2L_21_12730001 chr2L_12730001 KN35_1-HE 398 chr2L 12739172 12739205 chr2L 12743954 12743987 Doc 10 4782 1.0 5.5 3.2 2.4 4815 chr2L 12739172 exon MRP + chr2L 12741580 intron MRP + chr2L 12743987 exon MRP + chr2L_10_12740001 chr2L_12740001 KN35_1-HE 399 chr2L 12757318 12757352 chr2L 12757416 12757450 21 97 5.0 3.5 4.2 4.0 132 chr2L 12757318 intergenic not near genes chr2L 12757384 intergenic not near genes chr2L 12757450 intergenic not near genes chr2L_21_12755001 chr2L_12755001 KN35_1-HE 400 chr2L 12763863 12763873 chr2L 12764064 12764074 BS 5 201 0.0 6.5 3.2 1.2 211 chr2L 12763863 intergenic not near genes chr2L 12763968 intergenic not near genes chr2L 12764074 intergenic not near genes chr2L_5_12760001 chr2L_12760001 KN35_1-HE 401 chr2L 12766758 12766778 chr2L 12766837 12766857 17 79 7.0 6.5 6.8 2.2 99 chr2L 12766758 intergenic not near genes chr2L 12766808 intergenic not near genes chr2L 12766857 intergenic not near genes chr2L_17_12765001 chr2L_12765001 KN35_1-HE 402 chr2L 12769326 12769359 chr2L 12769440 12769473 22 114 4.0 6.5 5.2 3.5 147 chr2L 12769326 intergenic not near genes chr2L 12769400 intergenic not near genes chr2L 12769473 intergenic not near genes chr2L_22_12765001 chr2L_12765001 KN35_1-HE 403 chr2L 12781799 12781814 chr2L 12789250 12789265 Quasimodo 12 7451 19.0 10.0 14.5 0.8 7466 chr2L 12781799 intergenic not near genes chr2L 12785532 intergenic not near genes chr2L 12789265 intergenic not near genes chr2L_12_12785001 chr2L_12785001 KN35_1-HE 404 chr2L 12791602 12791633 chr2L 12795278 12795309 F-element 19 3675 9.5 8.0 8.8 1.9 3707 chr2L 12791602 intergenic not near genes chr2L 12793456 intergenic not near genes chr2L 12795309 intergenic not near genes chr2L_19_12790001 chr2L_12790001 KN35_1-HE 405 chr2L 12796883 12796917 chr2L 12796964 12796998 18 81 7.5 4.5 6.0 2.6 115 chr2L 12796883 intergenic not near genes chr2L 12796940 intergenic not near genes chr2L 12796998 intergenic not near genes chr2L_18_12795001 chr2L_12795001 KN35_1-HE 406 chr2L 12812540 12812550 chr2L 12813166 12813175 9 626 9.5 3.5 6.5 1.2 635 chr2L 12812540 intergenic not near genes chr2L 12812858 intergenic not near genes chr2L 12813175 intergenic not near genes chr2L_9_12810001 chr2L_12810001 KN35_1-HE 407 chr2L 12833578 12833590 chr2L 12833655 12833667 4 77 3.0 1.0 2.0 1.3 89 chr2L 12833578 intergenic not near genes chr2L 12833622 intergenic not near genes chr2L 12833667 intergenic not near genes chr2L_4_12830001 chr2L_12830001 KN35_1-HE 408 chr2L 12844260 12844279 chr2L 12844365 12844372 6 103 4.5 9.5 7.0 0.8 112 chr2L 12844260 intergenic not near genes chr2L 12844316 intergenic not near genes chr2L 12844372 intergenic not near genes chr2L_6_12840001 chr2L_12840001 KN35_1-HE 409 chr2L 12855530 12855560 chr2L 12855612 12855642 10 82 4.5 3.5 4.0 2.0 112 chr2L 12855530 intergenic not near genes chr2L 12855586 intergenic not near genes chr2L 12855642 intergenic not near genes chr2L_10_12855001 chr2L_12855001 KN35_1-HE 410 chr2L 12861692 12861731 chr2L 12863160 12863183 hobo 19 1467 2.5 3.0 2.8 5.0 1491 chr2L 12861692 intergenic not near genes chr2L 12862438 intergenic not near genes chr2L 12863183 intergenic not near genes chr2L_19_12860001 chr2L_12860001 KN35_1-HE 411 chr2L 12894020 12894054 chr2L 12895488 12895522 hobo 19 1468 6.5 7.5 7.0 2.4 1502 chr2L 12894020 intergenic not near genes chr2L 12894771 intergenic not near genes chr2L 12895522 intergenic not near genes chr2L_19_12890001 chr2L_12890001 KN35_1-HE 412 chr2L 12933847 12933880 chr2L 12941315 12941348 blood 21 7468 4.5 7.0 5.8 3.1 7501 chr2L 12933847 intergenic not near genes chr2L 12937598 intergenic not near genes chr2L 12941348 intergenic not near genes chr2L_21_12935001 chr2L_12935001 KN35_1-HE 413 chr2L 12971741 12971763 chr2L 12971820 12971842 19 79 9.5 11.0 10.2 1.7 101 chr2L 12971741 intergenic not near genes chr2L 12971792 intergenic not near genes chr2L 12971842 intergenic not near genes chr2L_19_12970001 chr2L_12970001 KN35_1-HE 414 chr2L 12989664 12989695 chr2L 12989746 12989777 11 82 1.0 3.0 2.0 3.7 113 chr2L 12989664 intergenic not near genes chr2L 12989720 intergenic not near genes chr2L 12989777 intergenic not near genes chr2L_11_12985001 chr2L_12985001 KN35_1-HE 415 chr2L 11411479 11411484 chr2L 13001342 13001346 4 1589862 15.5 7.5 11.5 0.3 1589867 chr2L 11411479 intergenic not near genes chr2L 12206412 intron aret + chr2L 13001346 3` UTR Vha68-1 - chr2L_4_12205001 chr2L_12205001 KN35_1-HE 416 chr2L 13036240 13036273 chr2L 13036483 13036516 X-element 18 243 3.5 4.0 3.8 3.8 276 chr2L 13036240 intron CG9932 - chr2L 13036378 intron CG9932 - chr2L 13036516 intron CG9932 - chr2L_18_13035001 chr2L_13035001 KN35_1-HE 417 chr2L 13115605 13115639 chr2L 13115696 13115730 16 91 4.5 6.5 5.5 2.5 125 chr2L 13115605 intergenic not near genes chr2L 13115668 intergenic not near genes chr2L 13115730 intergenic not near genes chr2L_16_13115001 chr2L_13115001 KN35_1-HE 418 chr2L 13147746 13147771 chr2L 13147823 13147848 11 77 5.0 3.0 4.0 2.2 102 chr2L 13147746 intergenic not near genes chr2L 13147797 intergenic not near genes chr2L 13147848 intergenic not near genes chr2L_11_13145001 chr2L_13145001 KN35_1-HE 419 chr2L 13231880 13231915 chr2L 13231992 13232027 18 112 2.5 5.0 3.8 3.8 147 chr2L 13231880 intergenic Prosalpha6T + chr2L 13231954 intergenic Prosalpha6T + chr2L 13232027 intergenic Prosalpha6T + chr2L_18_13230001 chr2L_13230001 KN35_1-HE 420 chr2L 13255286 13255300 chr2L 13255430 13255444 5 144 0.0 5.5 2.8 1.3 158 chr2L 13255286 intron CG31728 + chr2L 13255365 intron CG31728 + chr2L 13255444 exon CG31728 + chr2L_5_13255001 chr2L_13255001 KN35_1-HE 421 chr2L 13295051 13295057 chr2L 13295137 13295143 4 86 0.0 0.0 0.0 4.0 92 chr2L 13295051 intron CG31729 + chr2L 13295097 intron CG31729 + chr2L 13295143 intron CG31729 + chr2L_4_13295001 chr2L_13295001 KN35_1-HE 422 chr2L 13296943 13296961 chr2L 13297288 13297306 7 345 1.5 3.0 2.2 2.2 363 chr2L 13296943 intron CG31729 + chr2L 13297124 intron CG31729 + chr2L 13297306 intron CG31729 + chr2L_7_13295001 chr2L_13295001 KN35_1-HE 423 chr2L 13333092 13333098 chr2L 13333179 13333191 4 92 0.0 6.5 3.2 1.0 99 chr2L 13333092 intergenic not near genes chr2L 13333142 intergenic not near genes chr2L 13333191 intergenic not near genes chr2L_4_13330001 chr2L_13330001 KN35_1-HE 424 chr2L 13358517 13358527 chr2L 13358600 13358610 4 83 3.5 1.0 2.2 1.2 93 chr2L 13358517 intergenic not near genes chr2L 13358564 intergenic not near genes chr2L 13358610 intergenic not near genes chr2L_4_13355001 chr2L_13355001 KN35_1-HE 425 chr2L 13398727 13398744 chr2L 13398808 13398825 4 81 2.0 3.0 2.5 1.1 98 chr2L 13398727 intergenic CG10859 -,CR44600 -,CG7110 + chr2L 13398776 intergenic CR44600 -,CG10859 -,CG7110 + chr2L 13398825 intergenic CR44600 -,CG10859 -,CG7110 + chr2L_4_13395001 chr2L_13395001 KN35_1-HE 426 chr2L 13405648 13405679 chr2L 13410446 13410477 Doc 14 4798 2.0 2.5 2.2 4.4 4829 chr2L 13405648 exon CG7110 + chr2L 13408062 intron CG7110 + chr2L 13410477 intron CG7110 + chr2L_14_13405001 chr2L_13405001 KN35_1-HE 427 chr2L 13412327 13412346 chr2L 13412455 13412474 10 128 2.5 2.5 2.5 2.9 147 chr2L 13412327 intergenic CG16848 + chr2L 13412400 intergenic CG16848 + chr2L 13412474 intergenic CG16848 + chr2L_10_13410001 chr2L_13410001 KN35_1-HE 428 chr2L 13442309 13442334 chr2L 13442399 13442424 19 90 5.0 2.5 3.8 4.0 115 chr2L 13442309 intron,3` UTR CG42784 +,CR45683 - chr2L 13442366 intron,3` UTR CG42784 +,CR45683 - chr2L 13442424 intron CG42784 + chr2L_19_13440001 chr2L_13440001 KN35_1-HE 429 chr2L 13449462 13449496 chr2L 13456899 13456933 Quasimodo 10 7437 4.5 2.5 3.5 2.2 7471 chr2L 13449462 intron,5` UTR CG42784 +,Hsp60D - chr2L 13453198 intron CG42784 + chr2L 13456933 intron CG42784 + chr2L_10_13450001 chr2L_13450001 KN35_1-HE 430 chr2L 13460165 13460203 chr2L 13460259 13460296 8 93 3.5 4.5 4.0 1.6 131 chr2L 13460165 intron,3` UTR CG42784 +,CG42810 + chr2L 13460230 intron CG42784 + chr2L 13460296 intron CG42784 + chr2L_8_13460001 chr2L_13460001 KN35_1-HE 431 chr2L 13481448 13481475 chr2L 13482056 13482083 jockey 19 608 10.0 11.5 10.8 1.6 635 chr2L 13481448 intron CG42784 + chr2L 13481766 intron CG42784 + chr2L 13482083 intron CG42784 + chr2L_19_13480001 chr2L_13480001 KN35_1-HE 432 chr2L 13538070 13538096 chr2L 13538593 13538619 9 522 2.5 6.0 4.2 1.7 549 chr2L 13538070 intron B4 - chr2L 13538344 intron B4 - chr2L 13538619 intron B4 - chr2L_9_13535001 chr2L_13535001 KN35_1-HE 433 chr2L 13560398 13560419 chr2L 13565220 13565241 F-element 5 4822 12.5 5.5 9.0 0.5 4843 chr2L 13560398 intron kuz + chr2L 13562820 intron kuz + chr2L 13565241 intron kuz + chr2L_5_13560001 chr2L_13560001 KN35_1-HE 434 chr2L 13575059 13575071 chr2L 13575489 13575517 4 442 4.5 7.0 5.8 0.6 458 chr2L 13575059 intron kuz + chr2L 13575288 intron kuz + chr2L 13575517 intron kuz + chr2L_4_13575001 chr2L_13575001 KN35_1-HE 435 chr2L 13581455 13581488 chr2L 13581544 13581577 22 89 6.5 5.0 5.8 3.2 122 chr2L 13581455 intron kuz + chr2L 13581516 intron kuz + chr2L 13581577 intron kuz + chr2L_22_13580001 chr2L_13580001 KN35_1-HE 436 chr2L 13684273 13684290 chr2L 13684350 13684367 13 77 0.0 5.5 2.8 3.4 94 chr2L 13684273 intron CG31814 - chr2L 13684320 intron CG31814 - chr2L 13684367 intron CG31814 - chr2L_13_13680001 chr2L_13680001 KN35_1-HE 437 chr2L 13693007 13693040 chr2L 13693084 13693117 15 77 2.0 3.0 2.5 4.3 110 chr2L 13693007 intron CG31814 - chr2L 13693062 intron CG31814 - chr2L 13693117 intron CG31814 - chr2L_15_13690001 chr2L_13690001 KN35_1-HE 438 chr2L 13699554 13699586 chr2L 13699632 13699664 20 78 1.0 4.5 2.8 5.3 110 chr2L 13699554 intron CG31814 - chr2L 13699609 intron CG31814 - chr2L 13699664 intron CG31814 - chr2L_20_13695001 chr2L_13695001 KN35_1-HE 439 chr2L 13713559 13713574 chr2L 13713636 13713651 6 77 4.0 4.5 4.2 1.2 92 chr2L 13713559 intron CG31814 - chr2L 13713605 intron CG31814 - chr2L 13713651 intron CG31814 - chr2L_6_13710001 chr2L_13710001 KN35_1-HE 440 chr2L 13728807 13728832 chr2L 13728889 13728914 7 82 3.5 2.5 3.0 1.8 107 chr2L 13728807 intergenic not near genes chr2L 13728860 intergenic not near genes chr2L 13728914 intergenic not near genes chr2L_7_13725001 chr2L_13725001 KN35_1-HE 441 chr2L 13733771 13733788 chr2L 13733891 13733908 12 120 3.0 3.0 3.0 3.0 137 chr2L 13733771 intergenic not near genes chr2L 13733840 intergenic not near genes chr2L 13733908 intergenic not near genes chr2L_12_13730001 chr2L_13730001 KN35_1-HE 442 chr2L 13761803 13761835 chr2L 13762915 13762946 Doc 12 1112 3.5 5.5 4.5 2.2 1143 chr2L 13761803 intron TM9SF4 + chr2L 13762374 intron TM9SF4 + chr2L 13762946 intron TM9SF4 + chr2L_12_13760001 chr2L_13760001 KN35_1-HE 443 chr2L 13842130 13842165 chr2L 13842215 13842250 10 85 3.0 1.5 2.2 3.1 120 chr2L 13842130 intron CenG1A + chr2L 13842190 intron CenG1A + chr2L 13842250 intron CenG1A + chr2L_10_13840001 chr2L_13840001 KN35_1-HE 444 chr2L 13853082 13853116 chr2L 13862233 13862267 roo 13 9151 5.0 7.5 6.2 1.8 9185 chr2L 13853082 intron CenG1A + chr2L 13857674 intron CenG1A + chr2L 13862267 intron CenG1A + chr2L_13_13855001 chr2L_13855001 KN35_1-HE 445 chr2L 13914810 13914844 chr2L 13914891 13914925 18 81 2.5 4.0 3.2 4.3 115 chr2L 13914810 5` UTR Ance-3 + chr2L 13914868 5` UTR Ance-3 + chr2L 13914925 5` UTR Ance-3 + chr2L_18_13910001 chr2L_13910001 KN35_1-HE 446 chr2L 13972657 13972683 chr2L 13972745 13972771 6 88 1.0 5.0 3.0 1.5 114 chr2L 13972657 intron He - chr2L 13972714 intron He - chr2L 13972771 intron He - chr2L_6_13970001 chr2L_13970001 KN35_1-HE 447 chr2L 13988299 13988303 chr2L 13988387 13988391 4 88 4.0 8.0 6.0 0.6 92 chr2L 13988299 intron rk - chr2L 13988345 intron rk - chr2L 13988391 intron rk - chr2L_4_13985001 chr2L_13985001 KN35_1-HE 448 chr2L 14096155 14096168 chr2L 14096248 14096261 7 93 10.0 0.0 5.0 1.2 106 chr2L 14096155 intergenic not near genes chr2L 14096208 intergenic not near genes chr2L 14096261 intergenic not near genes chr2L_7_14095001 chr2L_14095001 KN35_1-HE 449 chr2L 14160689 14160717 chr2L 14160776 14160804 10 87 2.5 5.0 3.8 2.1 115 chr2L 14160689 intergenic CG17341 +,CG43332 - chr2L 14160746 intergenic CG17341 +,CG43332 - chr2L 14160804 intergenic CG17341 +,CG43332 - chr2L_10_14160001 chr2L_14160001 KN35_1-HE 450 chr2L 14229616 14229642 chr2L 14229710 14229736 13 94 5.5 0.0 2.8 3.4 120 chr2L 14229616 intron Dyrk2 - chr2L 14229676 intron Dyrk2 - chr2L 14229736 intron Dyrk2 - chr2L_13_14225001 chr2L_14225001 KN35_1-HE 451 chr2L 14235719 14235739 chr2L 14235813 14235833 7 94 0.0 7.5 3.8 1.5 114 chr2L 14235719 5` UTR CR44728 + chr2L 14235776 5` UTR CR44728 + chr2L 14235833 5` UTR CR44728 + chr2L_7_14235001 chr2L_14235001 KN35_1-HE 452 chr2L 14300174 14300207 chr2L 14300252 14300285 26 78 4.5 4.5 4.5 4.7 111 chr2L 14300174 intron wb + chr2L 14300230 intron wb + chr2L 14300285 intron wb + chr2L_26_14300001 chr2L_14300001 KN35_1-HE 453 chr2L 14371423 14371436 chr2L 14371519 14371532 6 96 0.0 4.0 2.0 2.0 109 chr2L 14371423 intergenic not near genes chr2L 14371478 intergenic not near genes chr2L 14371532 intergenic not near genes chr2L_6_14370001 chr2L_14370001 KN35_1-HE 454 chr2L 14374777 14374807 chr2L 14374869 14374899 11 92 2.0 5.5 3.8 2.3 122 chr2L 14374777 intergenic not near genes chr2L 14374838 intergenic not near genes chr2L 14374899 intergenic not near genes chr2L_11_14370001 chr2L_14370001 KN35_1-HE 455 chr2L 14465586 14465618 chr2L 14469050 14469096 hopper2 6 3473 2.0 0.0 1.0 3.0 3510 chr2L 14465586 intergenic not near genes chr2L 14467341 intergenic not near genes chr2L 14469096 intergenic not near genes chr2L_6_14465001 chr2L_14465001 KN35_1-HE 456 chr2L 14525567 14525601 chr2L 14525650 14525684 16 83 7.5 6.0 6.8 2.1 117 chr2L 14525567 exon CG33648 + chr2L 14525626 3` UTR CG33648 + chr2L 14525684 intergenic CG33648 + chr2L_16_14525001 chr2L_14525001 KN35_1-HE 457 chr2L 14549150 14549174 chr2L 14549227 14549251 9 77 1.0 0.0 0.5 6.0 101 chr2L 14549150 intergenic CG4218 - chr2L 14549200 intergenic CG4218 - chr2L 14549251 intergenic CG4218 - chr2L_9_14545001 chr2L_14545001 KN35_1-HE 458 chr2L 14552593 14552618 chr2L 14552680 14552705 11 86 6.0 4.5 5.2 1.8 112 chr2L 14552593 intergenic not near genes chr2L 14552649 intergenic not near genes chr2L 14552705 intergenic not near genes chr2L_11_14550001 chr2L_14550001 KN35_1-HE 459 chr2L 14555145 14555153 chr2L 14555225 14555233 4 80 3.5 2.0 2.8 1.1 88 chr2L 14555145 intergenic not near genes chr2L 14555189 intergenic not near genes chr2L 14555233 intergenic not near genes chr2L_4_14555001 chr2L_14555001 KN35_1-HE 460 chr2L 14588383 14588414 chr2L 14588538 14588569 14 155 2.5 4.5 3.5 3.1 186 chr2L 14588383 intergenic CG42680 - chr2L 14588476 intergenic CG42680 - chr2L 14588569 intergenic CG42680 - chr2L_14_14585001 chr2L_14585001 KN35_1-HE 461 chr2L 14601977 14602003 chr2L 14602062 14602088 12 85 6.5 6.5 6.5 1.6 111 chr2L 14601977 exon osp - chr2L 14602032 intron osp - chr2L 14602088 intron osp - chr2L_12_14600001 chr2L_14600001 KN35_1-HE 462 chr2L 14707205 14707236 chr2L 14707325 14707356 12 120 4.5 1.0 2.8 3.2 151 chr2L 14707205 intergenic not near genes chr2L 14707280 intergenic not near genes chr2L 14707356 intergenic not near genes chr2L_12_14705001 chr2L_14705001 KN35_1-HE 463 chr2L 14744163 14744175 chr2L 14744894 14744906 7 731 0.0 4.0 2.0 2.3 743 chr2L 14744163 intergenic CG42681 +,CG34166 + chr2L 14744534 exon CG42681 + chr2L 14744906 3` UTR CG42587 - chr2L_7_14740001 chr2L_14740001 KN35_1-HE 464 chr2L 14747769 14747781 chr2L 14747861 14747873 10 92 0.0 11.5 5.8 1.5 104 chr2L 14747769 intergenic not near genes chr2L 14747821 intergenic not near genes chr2L 14747873 intergenic not near genes chr2L_10_14745001 chr2L_14745001 KN35_1-HE 465 chr2L 14796483 14796516 chr2L 14796565 14796598 14 82 6.0 4.5 5.2 2.3 115 chr2L 14796483 exon CG18420 - chr2L 14796540 5` UTR CG18420 - chr2L 14796598 5` UTR CG18420 - chr2L_14_14795001 chr2L_14795001 KN35_1-HE 466 chr2L 14803880 14803913 chr2L 14809084 14809117 copia 13 5203 4.5 6.5 5.5 2.0 5237 chr2L 14803880 intergenic not near genes chr2L 14806498 intergenic not near genes chr2L 14809117 intergenic not near genes chr2L_13_14805001 chr2L_14805001 KN35_1-HE 467 chr2L 14839749 14839778 chr2L 14839826 14839855 19 77 7.5 4.0 5.8 2.8 106 chr2L 14839749 intergenic not near genes chr2L 14839802 intergenic not near genes chr2L 14839855 intergenic not near genes chr2L_19_14835001 chr2L_14835001 KN35_1-HE 468 chr2L 14840974 14841010 chr2L 14841062 14841098 19 88 2.5 6.0 4.2 3.7 124 chr2L 14840974 3` UTR CR43805 - chr2L 14841036 3` UTR CR43805 - chr2L 14841098 3` UTR CR43805 - chr2L_19_14840001 chr2L_14840001 KN35_1-HE 469 chr2L 14889953 14889987 chr2L 14890379 14890413 jockey 16 426 7.0 5.5 6.2 2.2 460 chr2L 14889953 intergenic not near genes chr2L 14890183 intergenic not near genes chr2L 14890413 intergenic not near genes chr2L_16_14890001 chr2L_14890001 KN35_1-HE 470 chr2L 14923101 14923137 chr2L 14923182 14923218 17 81 8.0 5.0 6.5 2.3 117 chr2L 14923101 intron CG42313 - chr2L 14923160 intron CG42313 - chr2L 14923218 intron CG42313 - chr2L_17_14920001 chr2L_14920001 KN35_1-HE 471 chr2L 14933376 14933399 chr2L 14933455 14933478 7 79 7.5 5.0 6.2 1.0 102 chr2L 14933376 intron CG42313 - chr2L 14933427 intron CG42313 - chr2L 14933478 intron CG42313 - chr2L_7_14930001 chr2L_14930001 KN35_1-HE 472 chr2L 14938384 14938419 chr2L 14938469 14938505 9 86 7.0 10.0 8.5 0.9 121 chr2L 14938384 intron CG42313 - chr2L 14938444 intron CG42313 - chr2L 14938505 intron CG42313 - chr2L_9_14935001 chr2L_14935001 KN35_1-HE 473 chr2L 14984381 14984405 chr2L 14991984 14992008 opus 6 7603 4.5 5.5 5.0 1.0 7627 chr2L 14984381 intron mol - chr2L 14988194 intron mol - chr2L 14992008 intron mol - chr2L_6_14985001 chr2L_14985001 KN35_1-HE 474 chr2L 14993420 14993425 chr2L 14993503 14993509 6 84 0.0 6.5 3.2 1.4 89 chr2L 14993420 intron mol - chr2L 14993464 intron mol - chr2L 14993509 intron mol - chr2L_6_14990001 chr2L_14990001 KN35_1-HE 475 chr2L 14994010 14994036 chr2L 14994127 14994153 10 117 4.5 4.5 4.5 1.8 143 chr2L 14994010 5` UTR mol - chr2L 14994082 intron mol - chr2L 14994153 intron mol - chr2L_10_14990001 chr2L_14990001 KN35_1-HE 476 chr2L 15014620 15014651 chr2L 15014700 15014731 5 80 0.0 4.5 2.2 1.6 111 chr2L 15014620 intergenic not near genes chr2L 15014676 intergenic not near genes chr2L 15014731 intergenic not near genes chr2L_5_15010001 chr2L_15010001 KN35_1-HE 477 chr2L 15021439 15021472 chr2L 15021516 15021549 24 77 6.5 4.5 5.5 3.7 110 chr2L 15021439 intron GABA-B-R1 + chr2L 15021494 intron GABA-B-R1 + chr2L 15021549 intron GABA-B-R1 + chr2L_24_15020001 chr2L_15020001 KN35_1-HE 478 chr2L 15078068 15078100 chr2L 15078156 15078189 12 89 2.5 2.5 2.5 3.4 121 chr2L 15078068 intron CG15270 + chr2L 15078128 intron CG15270 + chr2L 15078189 intron CG15270 + chr2L_12_15075001 chr2L_15075001 KN35_1-HE 479 chr2L 15082659 15082687 chr2L 15082754 15082782 7 95 2.0 1.5 1.8 2.5 123 chr2L 15082659 intron CG15270 + chr2L 15082720 intron CG15270 + chr2L 15082782 intron CG15270 + chr2L_7_15080001 chr2L_15080001 KN35_1-HE 480 chr2L 15083227 15083259 chr2L 15083314 15083346 26 87 9.5 6.5 8.0 2.9 119 chr2L 15083227 intron CG15270 + chr2L 15083286 intron CG15270 + chr2L 15083346 intron CG15270 + chr2L_26_15080001 chr2L_15080001 KN35_1-HE 481 chr2L 15098537 15098541 chr2L 15098618 15098622 7 81 7.0 7.5 7.2 0.9 85 chr2L 15098537 intergenic not near genes chr2L 15098580 intergenic not near genes chr2L 15098622 intergenic not near genes chr2L_7_15095001 chr2L_15095001 KN35_1-HE 482 chr2L 15103856 15103870 chr2L 15103954 15103968 7 98 11.0 9.5 10.2 0.6 112 chr2L 15103856 intergenic not near genes chr2L 15103912 intergenic not near genes chr2L 15103968 intergenic not near genes chr2L_7_15100001 chr2L_15100001 KN35_1-HE 483 chr2L 15122601 15122807 chr2L 15122686 15122888 20 82 1.5 4.0 2.8 5.3 287 chr2L 15122601 intergenic not near genes chr2L 15122744 intergenic not near genes chr2L 15122888 intergenic not near genes chr2L_20_15120001 chr2L_15120001 KN35_1-HE 484 chr2L 15197694 15197719 chr2L 15197886 15197911 15 192 6.5 2.5 4.5 2.7 217 chr2L 15197694 intron CG4168 - chr2L 15197802 intron CG4168 - chr2L 15197911 intron CG4168 - chr2L_15_15195001 chr2L_15195001 KN35_1-HE 485 chr2L 15226366 15226394 chr2L 15226443 15226471 10 77 4.0 1.5 2.8 2.6 105 chr2L 15226366 intergenic not near genes chr2L 15226418 intergenic not near genes chr2L 15226471 intergenic not near genes chr2L_10_15225001 chr2L_15225001 KN35_1-HE 486 chr2L 15228207 15228242 chr2L 15228307 15228341 8 100 6.0 2.5 4.2 1.5 134 chr2L 15228207 intergenic not near genes chr2L 15228274 intergenic ZnT35C - chr2L 15228341 intergenic ZnT35C - chr2L_8_15225001 chr2L_15225001 KN35_1-HE 487 chr2L 15319694 15319726 chr2L 15319775 15319807 11 81 3.5 3.5 3.5 2.4 113 chr2L 15319694 intergenic not near genes chr2L 15319750 intergenic not near genes chr2L 15319807 intergenic not near genes chr2L_11_15315001 chr2L_15315001 KN35_1-HE 488 chr2L 15321649 15321651 chr2L 15321728 15321730 4 79 0.0 13.0 6.5 0.5 81 chr2L 15321649 intergenic not near genes chr2L 15321690 intergenic not near genes chr2L 15321730 intergenic not near genes chr2L_4_15320001 chr2L_15320001 KN35_1-HE 489 chr2L 15343537 15343565 chr2L 15343623 15343651 13 86 1.5 0.0 0.8 7.2 114 chr2L 15343537 intergenic not near genes chr2L 15343594 intergenic not near genes chr2L 15343651 intergenic not near genes chr2L_13_15340001 chr2L_15340001 KN35_1-HE 490 chr2L 15375820 15375846 chr2L 15375933 15375959 11 113 4.0 4.5 4.2 2.1 139 chr2L 15375820 intergenic not near genes chr2L 15375890 intergenic not near genes chr2L 15375959 intergenic not near genes chr2L_11_15375001 chr2L_15375001 KN35_1-HE 491 chr2L 15394178 15394184 chr2L 15394265 15394271 5 87 10.5 0.0 5.2 0.8 93 chr2L 15394178 intergenic not near genes chr2L 15394224 intergenic not near genes chr2L 15394271 intergenic not near genes chr2L_5_15390001 chr2L_15390001 KN35_1-HE 492 chr2L 15427338 15427362 chr2L 15427435 15427459 11 97 3.5 4.5 4.0 2.2 121 chr2L 15427338 intergenic not near genes chr2L 15427398 intergenic not near genes chr2L 15427459 intergenic not near genes chr2L_11_15425001 chr2L_15425001 KN35_1-HE 493 chr2L 15446048 15446083 chr2L 15453518 15453553 blood 24 7470 7.5 5.5 6.5 3.2 7505 chr2L 15446048 intergenic not near genes chr2L 15449800 intergenic not near genes chr2L 15453553 intergenic not near genes chr2L_24_15445001 chr2L_15445001 KN35_1-HE 494 chr2L 15476399 15476421 chr2L 15476559 15476581 15 160 5.0 5.5 5.2 2.4 182 chr2L 15476399 intergenic sna - chr2L 15476490 intergenic sna - chr2L 15476581 intergenic sna - chr2L_15_15475001 chr2L_15475001 KN35_1-HE 495 chr2L 15483282 15483313 chr2L 15483369 15483400 17 87 2.0 5.0 3.5 3.8 118 chr2L 15483282 intergenic not near genes chr2L 15483341 intergenic not near genes chr2L 15483400 intergenic not near genes chr2L_17_15480001 chr2L_15480001 KN35_1-HE 496 chr2L 15514318 15514330 chr2L 15514403 15514415 8 85 8.5 2.0 5.2 1.3 97 chr2L 15514318 intergenic not near genes chr2L 15514366 intergenic not near genes chr2L 15514415 intergenic not near genes chr2L_8_15510001 chr2L_15510001 KN35_1-HE 497 chr2L 15527774 15527801 chr2L 15527866 15527893 18 92 2.5 6.5 4.5 3.3 119 chr2L 15527774 intergenic not near genes chr2L 15527834 intergenic not near genes chr2L 15527893 intergenic not near genes chr2L_18_15525001 chr2L_15525001 KN35_1-HE 498 chr2L 15567394 15567398 chr2L 15567483 15567487 5 89 0.0 2.5 1.2 2.3 93 chr2L 15567394 intron kek3 + chr2L 15567440 intron kek3 + chr2L 15567487 intron kek3 + chr2L_5_15565001 chr2L_15565001 KN35_1-HE 499 chr2L 15586403 15586442 chr2L 15593460 15593495 297 17 7056 1.0 4.5 2.8 4.5 7092 chr2L 15586403 intergenic not near genes chr2L 15589949 intergenic not near genes chr2L 15593495 intergenic not near genes chr2L_17_15585001 chr2L_15585001 KN35_1-HE 500 chr2L 15608959 15608969 chr2L 15609037 15609047 6 78 4.0 8.0 6.0 0.9 88 chr2L 15608959 intergenic not near genes chr2L 15609003 intergenic not near genes chr2L 15609047 intergenic not near genes chr2L_6_15605001 chr2L_15605001 KN35_1-HE 501 chr2L 15637537 15637572 chr2L 15637646 15637681 12 109 6.0 3.5 4.8 2.1 144 chr2L 15637537 intergenic not near genes chr2L 15637609 intergenic not near genes chr2L 15637681 intergenic not near genes chr2L_12_15635001 chr2L_15635001 KN35_1-HE 502 chr2L 15734293 15734325 chr2L 15734373 15734404 8 79 0.0 8.5 4.2 1.5 111 chr2L 15734293 intron CycE - chr2L 15734348 intron CycE - chr2L 15734404 intron CycE - chr2L_8_15730001 chr2L_15730001 KN35_1-HE 503 chr2L 15785935 15786191 chr2L 15786012 15786285 18 78 18.0 6.5 12.2 1.4 350 chr2L 15785935 exon CG18109 + chr2L 15786110 exon CG18109 + chr2L 15786285 exon CG18109 + chr2L_18_15785001 chr2L_15785001 KN35_1-HE 504 chr2L 15807867 15807903 chr2L 15808058 15808094 16 191 6.5 8.0 7.2 2.0 227 chr2L 15807867 3` UTR CR44602 - chr2L 15807980 3` UTR CR44602 - chr2L 15808094 3` UTR CR44602 - chr2L_16_15805001 chr2L_15805001 KN35_1-HE 505 chr2L 15821059 15821081 chr2L 15821160 15821182 7 101 0.0 6.0 3.0 1.8 123 chr2L 15821059 intergenic not near genes chr2L 15821120 intergenic not near genes chr2L 15821182 intergenic not near genes chr2L_7_15820001 chr2L_15820001 KN35_1-HE 506 chr2L 15863105 15863136 chr2L 15863187 15863218 13 82 4.0 6.5 5.2 2.1 113 chr2L 15863105 intergenic CR42791 + chr2L 15863162 intergenic CR42791 + chr2L 15863218 5` UTR CR42791 + chr2L_13_15860001 chr2L_15860001 KN35_1-HE 507 chr2L 15888027 15888051 chr2L 15888111 15888139 11 83 4.5 5.0 4.8 1.9 112 chr2L 15888027 intergenic not near genes chr2L 15888083 intergenic not near genes chr2L 15888139 intergenic Tep1 - chr2L_11_15885001 chr2L_15885001 KN35_1-HE 508 chr2L 15906184 15906212 chr2L 15906274 15906302 7 90 2.5 4.5 3.5 1.6 118 chr2L 15906184 intron beat-Ib - chr2L 15906243 intron beat-Ib - chr2L 15906302 intron beat-Ib - chr2L_7_15905001 chr2L_15905001 KN35_1-HE 509 chr2L 15907337 15907369 chr2L 15907693 15907725 11 356 4.5 1.0 2.8 2.9 388 chr2L 15907337 intron beat-Ib - chr2L 15907531 intron beat-Ib - chr2L 15907725 intron beat-Ib - chr2L_11_15905001 chr2L_15905001 KN35_1-HE 510 chr2L 15918296 15918306 chr2L 15918377 15918387 4 81 1.0 1.0 1.0 2.0 91 chr2L 15918296 intron beat-Ib - chr2L 15918342 intron beat-Ib - chr2L 15918387 intron beat-Ib - chr2L_4_15915001 chr2L_15915001 KN35_1-HE 511 chr2L 15935208 15935221 chr2L 15935299 15935312 6 91 0.0 1.5 0.8 3.3 104 chr2L 15935208 intron beat-Ib - chr2L 15935260 intron beat-Ib - chr2L 15935312 intron beat-Ib - chr2L_6_15935001 chr2L_15935001 KN35_1-HE 512 chr2L 15950384 15950417 chr2L 15950463 15950496 12 79 6.5 5.0 5.8 1.8 112 chr2L 15950384 intron beat-Ib - chr2L 15950440 intron beat-Ib - chr2L 15950496 intron beat-Ib - chr2L_12_15950001 chr2L_15950001 KN35_1-HE 513 chr2L 15956028 15956060 chr2L 15957524 15957556 hobo 14 1496 7.0 5.5 6.2 1.9 1528 chr2L 15956028 intron beat-Ib - chr2L 15956792 intron beat-Ib - chr2L 15957556 intron beat-Ib - chr2L_14_15955001 chr2L_15955001 KN35_1-HE 514 chr2L 15959764 15959781 chr2L 15959946 15959963 4 182 5.0 2.5 3.8 0.8 199 chr2L 15959764 intron beat-Ib - chr2L 15959864 intron beat-Ib - chr2L 15959963 intron beat-Ib - chr2L_4_15955001 chr2L_15955001 KN35_1-HE 515 chr2L 15971986 15971997 chr2L 15972085 15972096 5 99 0.0 6.5 3.2 1.2 110 chr2L 15971986 intergenic not near genes chr2L 15972041 intergenic not near genes chr2L 15972096 intergenic not near genes chr2L_5_15970001 chr2L_15970001 KN35_1-HE 516 chr2L 15995399 15995434 chr2L 15995492 15995527 13 93 6.5 0.0 3.2 3.1 128 chr2L 15995399 intergenic not near genes chr2L 15995463 intergenic not near genes chr2L 15995527 intergenic not near genes chr2L_13_15995001 chr2L_15995001 KN35_1-HE 517 chr2L 16001284 16001307 chr2L 16001381 16001404 19 97 4.0 0.5 2.2 5.9 120 chr2L 16001284 intron beat-Ic + chr2L 16001344 intron beat-Ic + chr2L 16001404 intron beat-Ic + chr2L_19_16000001 chr2L_16000001 KN35_1-HE 518 chr2L 16025952 16025956 chr2L 16026030 16026034 4 78 0.0 12.0 6.0 0.6 82 chr2L 16025952 intron beat-Ic + chr2L 16025993 intron beat-Ic + chr2L 16026034 intron beat-Ic + chr2L_4_16025001 chr2L_16025001 KN35_1-HE 519 chr2L 16058124 16058152 chr2L 16058266 16058294 17 142 6.0 1.5 3.8 3.5 170 chr2L 16058124 intron beat-Ia + chr2L 16058209 intron beat-Ia + chr2L 16058294 intron beat-Ia + chr2L_17_16055001 chr2L_16055001 KN35_1-HE 520 chr2L 16112370 16112385 chr2L 16112454 16112469 6 84 5.0 0.0 2.5 1.7 99 chr2L 16112370 intergenic not near genes chr2L 16112420 intergenic not near genes chr2L 16112469 intergenic not near genes chr2L_6_16110001 chr2L_16110001 KN35_1-HE 521 chr2L 16114519 16114548 chr2L 16114613 16114642 15 94 4.0 4.0 4.0 3.0 123 chr2L 16114519 intergenic not near genes chr2L 16114580 intergenic not near genes chr2L 16114642 intergenic not near genes chr2L_15_16110001 chr2L_16110001 KN35_1-HE 522 chr2L 16128102 16128132 chr2L 16128181 16128211 26 79 3.0 6.0 4.5 4.7 109 chr2L 16128102 intergenic not near genes chr2L 16128156 intergenic not near genes chr2L 16128211 intergenic not near genes chr2L_26_16125001 chr2L_16125001 KN35_1-HE 523 chr2L 16141170 16141196 chr2L 16146378 16146404 copia 10 5208 3.5 11.5 7.5 1.2 5234 chr2L 16141170 intergenic not near genes chr2L 16143787 intergenic not near genes chr2L 16146404 intergenic not near genes chr2L_10_16140001 chr2L_16140001 KN35_1-HE 524 chr2L 16147189 16147211 chr2L 16147268 16147290 10 79 0.0 5.0 2.5 2.9 101 chr2L 16147189 intergenic not near genes chr2L 16147240 intergenic not near genes chr2L 16147290 intergenic not near genes chr2L_10_16145001 chr2L_16145001 KN35_1-HE 525 chr2L 16153742 16153759 chr2L 16160811 16160828 297 11 7069 6.0 6.5 6.2 1.5 7086 chr2L 16153742 intergenic not near genes chr2L 16157285 intergenic not near genes chr2L 16160828 intergenic not near genes chr2L_11_16155001 chr2L_16155001 KN35_1-HE 526 chr2L 16220091 16220126 chr2L 16220278 16220313 14 187 6.5 3.5 5.0 2.3 222 chr2L 16220091 intergenic not near genes chr2L 16220202 intergenic not near genes chr2L 16220313 intergenic not near genes chr2L_14_16220001 chr2L_16220001 KN35_1-HE 527 chr2L 16226180 16226214 chr2L 16226268 16226302 20 88 2.5 5.0 3.8 4.2 122 chr2L 16226180 intergenic not near genes chr2L 16226241 intergenic not near genes chr2L 16226302 intergenic not near genes chr2L_20_16225001 chr2L_16225001 KN35_1-HE 528 chr2L 16242081 16242087 chr2L 16242174 16242180 5 93 5.0 7.5 6.2 0.7 99 chr2L 16242081 exon CG42818 + chr2L 16242130 exon CG42818 + chr2L 16242180 exon CG42818 + chr2L_5_16240001 chr2L_16240001 KN35_1-HE 529 chr2L 16243691 16243845 chr2L 16243775 16243941 28 91 9.0 5.0 7.0 3.5 250 chr2L 16243691 exon CG42818 + chr2L 16243816 exon CG42818 + chr2L 16243941 exon CG42818 + chr2L_28_16240001 chr2L_16240001 KN35_1-HE 530 chr2L 16254895 16254911 chr2L 16255155 16255171 8 260 4.0 8.5 6.2 1.1 276 chr2L 16254895 intron PRL-1 - chr2L 16255033 intron PRL-1 - chr2L 16255171 intron PRL-1 - chr2L_8_16255001 chr2L_16255001 KN35_1-HE 531 chr2L 16256711 16256743 chr2L 16256859 16256891 14 148 4.0 3.0 3.5 3.1 180 chr2L 16256711 intron PRL-1 - chr2L 16256801 intron PRL-1 - chr2L 16256891 intron PRL-1 - chr2L_14_16255001 chr2L_16255001 KN35_1-HE 532 chr2L 16280253 16280286 chr2L 16281422 16281455 1360 7 1167 3.5 8.0 5.8 1.0 1202 chr2L 16280253 intron crp - chr2L 16280854 intron crp - chr2L 16281455 intron crp - chr2L_7_16280001 chr2L_16280001 KN35_1-HE 533 chr2L 16283501 16283533 chr2L 16283600 16283631 7 98 3.5 3.0 3.2 1.7 130 chr2L 16283501 intron crp - chr2L 16283566 intron crp - chr2L 16283631 intron crp - chr2L_7_16280001 chr2L_16280001 KN35_1-HE 534 chr2L 16384490 16384510 chr2L 16384580 16384600 15 90 8.0 13.5 10.8 1.3 110 chr2L 16384490 intergenic not near genes chr2L 16384545 intergenic not near genes chr2L 16384600 intergenic not near genes chr2L_15_16380001 chr2L_16380001 KN35_1-HE 535 chr2L 16384512 16384525 chr2L 16384602 16384615 7 90 5.0 21.5 13.2 0.5 103 chr2L 16384512 intergenic not near genes chr2L 16384564 intergenic not near genes chr2L 16384615 intergenic not near genes chr2L_7_16380001 chr2L_16380001 KN35_1-HE 536 chr2L 16407411 16407422 chr2L 16407542 16407553 7 131 2.5 2.5 2.5 2.0 142 chr2L 16407411 intron CG5888 - chr2L 16407482 intron CG5888 - chr2L 16407553 intron CG5888 - chr2L_7_16405001 chr2L_16405001 KN35_1-HE 537 chr2L 16497968 16497996 chr2L 16498063 16498091 18 95 5.5 0.0 2.8 4.7 123 chr2L 16497968 intron Tpr2 + chr2L 16498030 intron Tpr2 + chr2L 16498091 intron Tpr2 + chr2L_18_16495001 chr2L_16495001 KN35_1-HE 538 chr2L 16511963 16511995 chr2L 16519078 16519110 HMS-Beagle 15 7115 4.5 8.5 6.5 2.0 7147 chr2L 16511963 intron CG5953 - chr2L 16515536 intron CG5953 - chr2L 16519110 intron CG5953 - chr2L_15_16515001 chr2L_16515001 KN35_1-HE 539 chr2L 16522086 16522095 chr2L 16522173 16522182 6 87 0.0 0.0 0.0 6.0 96 chr2L 16522086 intron CG5953 - chr2L 16522134 intron CG5953 - chr2L 16522182 intron CG5953 - chr2L_6_16520001 chr2L_16520001 KN35_1-HE 540 chr2L 16572308 16572329 chr2L 16572561 16572582 11 253 3.5 8.0 5.8 1.6 274 chr2L 16572308 intron CG42389 + chr2L 16572445 intron CG42389 + chr2L 16572582 intron CG42389 + chr2L_11_16570001 chr2L_16570001 KN35_1-HE 541 chr2L 16591975 16591991 chr2L 16592060 16592072 8 86 8.0 0.0 4.0 1.6 97 chr2L 16591975 intron CG42389 + chr2L 16592024 intron CG42389 + chr2L 16592072 intron CG42389 + chr2L_8_16590001 chr2L_16590001 KN35_1-HE 542 chr2L 16709088 16709101 chr2L 16709173 16709186 11 85 4.0 7.0 5.5 1.7 98 chr2L 16709088 intron CG31808 - chr2L 16709137 intron CG31808 - chr2L 16709186 intron CG31808 - chr2L_11_16705001 chr2L_16705001 KN35_1-HE 543 chr2L 16728921 16728957 chr2L 16729557 16729593 16 636 2.5 2.0 2.2 5.0 672 chr2L 16728921 intergenic not near genes chr2L 16729257 intergenic not near genes chr2L 16729593 intergenic CG31812 + chr2L_16_16725001 chr2L_16725001 KN35_1-HE 544 chr2L 16753318 16753342 chr2L 16753415 16753439 9 97 2.0 2.5 2.2 2.8 121 chr2L 16753318 3` UTR CG17912 + chr2L 16753378 3` UTR CG17912 + chr2L 16753439 3` UTR CG17912 + chr2L_9_16750001 chr2L_16750001 KN35_1-HE 545 chr2L 16764352 16764384 chr2L 16764443 16764475 31 89 7.0 6.5 6.8 4.0 123 chr2L 16764352 intergenic not near genes chr2L 16764414 intergenic not near genes chr2L 16764475 intergenic not near genes chr2L_31_16760001 chr2L_16760001 KN35_1-HE 546 chr2L 16818840 16818860 chr2L 16818916 16818937 7 77 3.0 0.0 1.5 2.8 97 chr2L 16818840 intron,intron CG13280 -,mdy + chr2L 16818888 intron,intron CG13280 -,mdy + chr2L 16818937 intron,intron CG13280 -,mdy + chr2L_7_16815001 chr2L_16815001 KN35_1-HE 547 chr2L 16841011 16841044 chr2L 16841088 16841121 15 77 8.0 3.5 5.8 2.2 110 chr2L 16841011 intron,intron SclA +,SclB + chr2L 16841066 intron,intron SclA +,SclB + chr2L 16841121 intron,intron SclA +,SclB + chr2L_15_16840001 chr2L_16840001 KN35_1-HE 548 chr2L 16850543 16850581 chr2L 16850641 16850679 12 98 0.5 2.0 1.2 5.5 136 chr2L 16850543 intron CG31810 - chr2L 16850611 intron CG31810 - chr2L 16850679 intron CG31810 - chr2L_12_16850001 chr2L_16850001 KN35_1-HE 549 chr2L 16867024 16867035 chr2L 16867120 16867131 5 96 4.0 4.0 4.0 1.0 107 chr2L 16867024 intergenic not near genes chr2L 16867078 intergenic not near genes chr2L 16867131 intergenic not near genes chr2L_5_16865001 chr2L_16865001 KN35_1-HE 550 chr2L 16873276 16873296 chr2L 16873354 16873374 13 78 0.5 12.0 6.2 1.8 98 chr2L 16873276 intron CR31781 + chr2L 16873325 intron CR31781 + chr2L 16873374 intron CR31781 + chr2L_13_16870001 chr2L_16870001 KN35_1-HE 551 chr2L 16898032 16898066 chr2L 16898160 16898183 4 120 5.0 0.0 2.5 1.1 151 chr2L 16898032 exon tweek + chr2L 16898108 intron tweek + chr2L 16898183 intron,3` UTR tweek +,CG31805 - chr2L_4_16895001 chr2L_16895001 KN35_1-HE 552 chr2L 16917237 16917256 chr2L 16917341 16917360 9 103 7.0 8.0 7.5 1.1 123 chr2L 16917237 intergenic tweek + chr2L 16917298 intergenic tweek + chr2L 16917360 intergenic tweek + chr2L_9_16915001 chr2L_16915001 KN35_1-HE 553 chr2L 16939992 16940013 chr2L 16940071 16940092 13 78 4.0 5.5 4.8 2.2 100 chr2L 16939992 intergenic not near genes chr2L 16940042 intergenic not near genes chr2L 16940092 intergenic not near genes chr2L_13_16940001 chr2L_16940001 KN35_1-HE 554 chr2L 16956525 16956554 chr2L 16956617 16956646 14 90 8.0 7.0 7.5 1.6 121 chr2L 16956525 intergenic not near genes chr2L 16956586 intergenic not near genes chr2L 16956646 intergenic not near genes chr2L_14_16955001 chr2L_16955001 KN35_1-HE 555 chr2L 16958102 16958140 chr2L 16962891 16962929 Doc 29 4789 4.5 10.0 7.2 3.5 4827 chr2L 16958102 intergenic not near genes chr2L 16960516 intergenic not near genes chr2L 16962929 intergenic not near genes chr2L_29_16960001 chr2L_16960001 KN35_1-HE 556 chr2L 16987419 16987457 chr2L 16987500 16987538 17 81 4.5 5.5 5.0 2.8 119 chr2L 16987419 intron beat-IIIb + chr2L 16987478 intron beat-IIIb + chr2L 16987538 intron beat-IIIb + chr2L_17_16985001 chr2L_16985001 KN35_1-HE 557 chr2L 17000117 17000154 chr2L 17000240 17000277 18 123 6.5 5.0 5.8 2.6 160 chr2L 17000117 intergenic not near genes chr2L 17000197 intergenic not near genes chr2L 17000277 intergenic not near genes chr2L_18_17000001 chr2L_17000001 KN35_1-HE 558 chr2L 17010421 17010456 chr2L 17010507 17010542 20 86 4.5 6.0 5.2 3.2 121 chr2L 17010421 intergenic not near genes chr2L 17010482 intergenic not near genes chr2L 17010542 intergenic not near genes chr2L_20_17010001 chr2L_17010001 KN35_1-HE 559 chr2L 17018706 17018741 chr2L 17018783 17018818 13 77 7.0 0.0 3.5 2.9 112 chr2L 17018706 intergenic not near genes chr2L 17018762 intergenic not near genes chr2L 17018818 intergenic not near genes chr2L_13_17015001 chr2L_17015001 KN35_1-HE 560 chr2L 17070201 17070217 chr2L 17070298 17070314 9 97 6.0 8.0 7.0 1.1 113 chr2L 17070201 intergenic not near genes chr2L 17070258 intergenic not near genes chr2L 17070314 intergenic not near genes chr2L_9_17070001 chr2L_17070001 KN35_1-HE 561 chr2L 17087377 17087400 chr2L 17087496 17087519 9 119 5.0 4.0 4.5 1.6 142 chr2L 17087377 intergenic CG12620 + chr2L 17087448 intergenic CG12620 + chr2L 17087519 intergenic CG12620 + chr2L_9_17085001 chr2L_17085001 KN35_1-HE 562 chr2L 17101902 17101915 chr2L 17101980 17101993 4 78 5.5 3.0 4.2 0.8 91 chr2L 17101902 intergenic not near genes chr2L 17101948 intergenic not near genes chr2L 17101993 intergenic not near genes chr2L_4_17100001 chr2L_17100001 KN35_1-HE 563 chr2L 17111837 17111869 chr2L 17111936 17111968 15 99 5.0 3.5 4.2 2.9 131 chr2L 17111837 intergenic not near genes chr2L 17111902 intergenic not near genes chr2L 17111968 intergenic not near genes chr2L_15_17110001 chr2L_17110001 KN35_1-HE 564 chr2L 17120842 17120874 chr2L 17120922 17120954 16 80 5.5 4.5 5.0 2.7 112 chr2L 17120842 intergenic not near genes chr2L 17120898 intergenic not near genes chr2L 17120954 intergenic not near genes chr2L_16_17120001 chr2L_17120001 KN35_1-HE 565 chr2L 17142639 17142648 chr2L 17142733 17142742 4 94 2.5 5.5 4.0 0.8 103 chr2L 17142639 intron,intron CG34106 +,beat-IIIa + chr2L 17142690 intron,intron CG34106 +,beat-IIIa + chr2L 17142742 intron,intron CG34106 +,beat-IIIa + chr2L_4_17140001 chr2L_17140001 KN35_1-HE 566 chr2L 17152337 17152363 chr2L 17152417 17152443 11 80 3.0 6.0 4.5 2.0 106 chr2L 17152337 intron,intron CG34106 +,beat-IIIa + chr2L 17152390 intron,intron CG34106 +,beat-IIIa + chr2L 17152443 intron,intron CG34106 +,beat-IIIa + chr2L_11_17150001 chr2L_17150001 KN35_1-HE 567 chr2L 17153303 17153326 chr2L 17153396 17153419 8 93 0.0 2.0 1.0 4.0 116 chr2L 17153303 intron,intron CG34106 +,beat-IIIa + chr2L 17153361 intron,intron CG34106 +,beat-IIIa + chr2L 17153419 intron,intron CG34106 +,beat-IIIa + chr2L_8_17150001 chr2L_17150001 KN35_1-HE 568 chr2L 17158728 17158763 chr2L 17158831 17158866 15 103 5.0 5.5 5.2 2.4 138 chr2L 17158728 5` UTR,exon CG34106 +,beat-IIIa + chr2L 17158797 intron,intron CG34106 +,beat-IIIa + chr2L 17158866 intron,intron CG34106 +,beat-IIIa + chr2L_15_17155001 chr2L_17155001 KN35_1-HE 569 chr2L 17167564 17167596 chr2L 17167806 17167838 pogo 11 242 5.5 3.0 4.2 2.1 274 chr2L 17167564 intron,intron CG34106 +,beat-IIIa + chr2L 17167701 intron,intron CG34106 +,beat-IIIa + chr2L 17167838 intron,intron CG34106 +,beat-IIIa + chr2L_11_17165001 chr2L_17165001 KN35_1-HE 570 chr2L 17199157 17199194 chr2L 17200625 17200662 hobo 19 1468 4.5 10.0 7.2 2.3 1505 chr2L 17199157 intron beat-IIIc - chr2L 17199910 intron beat-IIIc - chr2L 17200662 intron beat-IIIc - chr2L_19_17195001 chr2L_17195001 KN35_1-HE 571 chr2L 17261224 17261245 chr2L 17261316 17261337 4 92 0.0 7.5 3.8 0.8 113 chr2L 17261224 intergenic beat-IIIc - chr2L 17261280 intergenic not near genes chr2L 17261337 intergenic not near genes chr2L_4_17260001 chr2L_17260001 KN35_1-HE 572 chr2L 17273190 17273226 chr2L 17277974 17278010 F-element 18 4784 5.0 4.0 4.5 3.3 4820 chr2L 17273190 intergenic not near genes chr2L 17275600 intergenic not near genes chr2L 17278010 intergenic not near genes chr2L_18_17275001 chr2L_17275001 KN35_1-HE 573 chr2L 17286976 17286982 chr2L 17287059 17287066 6 84 19.5 0.5 10.0 0.5 90 chr2L 17286976 exon CG15140 + chr2L 17287021 exon CG15140 + chr2L 17287066 exon CG15140 + chr2L_6_17285001 chr2L_17285001 KN35_1-HE 574 chr2L 17292361 17292388 chr2L 17292442 17292469 15 81 8.0 7.0 7.5 1.8 108 chr2L 17292361 intergenic CG6380 - chr2L 17292415 intergenic CG6380 - chr2L 17292469 intergenic CG6380 - chr2L_15_17290001 chr2L_17290001 KN35_1-HE 575 chr2L 17310373 17310401 chr2L 17310468 17310496 10 95 1.5 3.5 2.5 2.9 123 chr2L 17310373 intergenic not near genes chr2L 17310434 intergenic not near genes chr2L 17310496 intergenic not near genes chr2L_10_17310001 chr2L_17310001 KN35_1-HE 576 chr2L 17327911 17327919 chr2L 17327998 17328006 5 87 8.5 10.5 9.5 0.5 95 chr2L 17327911 intergenic not near genes chr2L 17327958 intergenic not near genes chr2L 17328006 intergenic not near genes chr2L_5_17325001 chr2L_17325001 KN35_1-HE 577 chr2L 17327921 17327928 chr2L 17327997 17328015 8 86 7.5 10.5 9.0 0.8 94 chr2L 17327921 intergenic not near genes chr2L 17327968 intergenic not near genes chr2L 17328015 intergenic not near genes chr2L_8_17325001 chr2L_17325001 KN35_1-HE 578 chr2L 17335547 17335580 chr2L 17336714 17336747 1360 10 1167 3.0 7.5 5.2 1.6 1200 chr2L 17335547 intergenic not near genes chr2L 17336147 intergenic not near genes chr2L 17336747 intergenic not near genes chr2L_10_17335001 chr2L_17335001 KN35_1-HE 579 chr2L 17339126 17339161 chr2L 17339204 17339239 26 78 3.0 5.0 4.0 5.2 113 chr2L 17339126 intergenic not near genes chr2L 17339182 intergenic not near genes chr2L 17339239 intergenic not near genes chr2L_26_17335001 chr2L_17335001 KN35_1-HE 580 chr2L 17387473 17387495 chr2L 17387556 17387578 9 83 4.0 4.5 4.2 1.7 105 chr2L 17387473 intron CLIP-190 + chr2L 17387526 intron CLIP-190 + chr2L 17387578 intron CLIP-190 + chr2L_9_17385001 chr2L_17385001 KN35_1-HE 581 chr2L 17389849 17389885 chr2L 17389932 17389968 7 83 4.0 2.5 3.2 1.7 119 chr2L 17389849 intron CLIP-190 + chr2L 17389908 intron CLIP-190 + chr2L 17389968 intron CLIP-190 + chr2L_7_17385001 chr2L_17385001 KN35_1-HE 582 chr2L 17419297 17419315 chr2L 17419374 17419392 8 77 4.5 5.0 4.8 1.4 95 chr2L 17419297 intron Dif - chr2L 17419344 intron Dif - chr2L 17419392 intron Dif - chr2L_8_17415001 chr2L_17415001 KN35_1-HE 583 chr2L 17420894 17420912 chr2L 17420976 17420994 9 82 0.0 3.5 1.8 3.2 100 chr2L 17420894 intron Dif - chr2L 17420944 intron Dif - chr2L 17420994 intron Dif - chr2L_9_17420001 chr2L_17420001 KN35_1-HE 584 chr2L 17424711 17424740 chr2L 17424824 17424853 14 113 2.0 0.0 1.0 7.0 142 chr2L 17424711 intron Dif - chr2L 17424782 intron Dif - chr2L 17424853 intron Dif - chr2L_14_17420001 chr2L_17420001 KN35_1-HE 585 chr2L 17425812 17425819 chr2L 17425897 17425904 6 85 3.0 4.0 3.5 1.3 92 chr2L 17425812 intron Dif - chr2L 17425858 intron Dif - chr2L 17425904 intron Dif - chr2L_6_17425001 chr2L_17425001 KN35_1-HE 586 chr2L 17432016 17432024 chr2L 17432127 17432135 1360 6 111 0.5 2.5 1.5 2.4 119 chr2L 17432016 intron Dif - chr2L 17432076 intron Dif - chr2L 17432135 intron Dif - chr2L_6_17430001 chr2L_17430001 KN35_1-HE 587 chr2L 17470585 17470601 chr2L 17470739 17470755 4 154 7.0 3.5 5.2 0.6 170 chr2L 17470585 intron BicD - chr2L 17470670 intron BicD - chr2L 17470755 intron BicD - chr2L_4_17470001 chr2L_17470001 KN35_1-HE 588 chr2L 17540872 17540904 chr2L 17540970 17541003 9 99 4.5 6.0 5.2 1.5 131 chr2L 17540872 intergenic not near genes chr2L 17540938 intergenic not near genes chr2L 17541003 intergenic not near genes chr2L_9_17540001 chr2L_17540001 KN35_1-HE 589 chr2L 17543591 17543625 chr2L 17543685 17543719 20 93 6.0 5.5 5.8 2.9 128 chr2L 17543591 intergenic not near genes chr2L 17543655 intergenic not near genes chr2L 17543719 intergenic not near genes chr2L_20_17540001 chr2L_17540001 KN35_1-HE 590 chr2L 17551482 17551486 chr2L 17551864 17551868 4 382 3.0 0.0 1.5 1.6 386 chr2L 17551482 intergenic not near genes chr2L 17551675 intergenic not near genes chr2L 17551868 intergenic not near genes chr2L_4_17550001 chr2L_17550001 KN35_1-HE 591 chr2L 17595470 17595485 chr2L 17595583 17595598 7 113 4.0 4.5 4.2 1.3 128 chr2L 17595470 intron Sytalpha + chr2L 17595534 intron Sytalpha + chr2L 17595598 intron Sytalpha + chr2L_7_17595001 chr2L_17595001 KN35_1-HE 592 chr2L 17607472 17607481 chr2L 17607571 17607580 7 99 12.5 2.0 7.2 0.9 108 chr2L 17607472 intergenic CR44412 - chr2L 17607526 intergenic CR44412 - chr2L 17607580 intergenic CR44412 - chr2L_7_17605001 chr2L_17605001 KN35_1-HE 593 chr2L 17637145 17637172 chr2L 17637224 17637251 8 79 2.5 6.5 4.5 1.5 106 chr2L 17637145 intergenic not near genes chr2L 17637198 intergenic not near genes chr2L 17637251 intergenic not near genes chr2L_8_17635001 chr2L_17635001 KN35_1-HE 594 chr2L 17664824 17664857 chr2L 17664985 17665018 22 161 7.0 6.5 6.8 2.8 194 chr2L 17664824 intron CadN - chr2L 17664921 intron CadN - chr2L 17665018 intron CadN - chr2L_22_17660001 chr2L_17660001 KN35_1-HE 595 chr2L 17723787 17723799 chr2L 17723881 17723893 7 94 6.0 4.0 5.0 1.2 106 chr2L 17723787 intron CadN - chr2L 17723840 intron CadN - chr2L 17723893 intron CadN - chr2L_7_17720001 chr2L_17720001 KN35_1-HE 596 chr2L 17727869 17727882 chr2L 17729337 17729350 hobo 9 1468 6.5 15.0 10.8 0.8 1481 chr2L 17727869 intron CadN - chr2L 17728610 intron CadN - chr2L 17729350 intron CadN - chr2L_9_17725001 chr2L_17725001 KN35_1-HE 597 chr2L 17819918 17819942 chr2L 17825123 17825147 copia 11 5205 5.5 5.0 5.2 1.8 5229 chr2L 17819918 intron CadN2 - chr2L 17822532 intron CadN2 - chr2L 17825147 intron CadN2 - chr2L_11_17820001 chr2L_17820001 KN35_1-HE 598 chr2L 17879996 17880026 chr2L 17880084 17880114 13 87 6.0 5.5 5.8 1.9 118 chr2L 17879996 intergenic not near genes chr2L 17880055 intergenic not near genes chr2L 17880114 intergenic not near genes chr2L_13_17880001 chr2L_17880001 KN35_1-HE 599 chr2L 17911970 17911981 chr2L 17914145 17914156 pogo 4 2175 11.0 3.0 7.0 0.5 2186 chr2L 17911970 intergenic not near genes chr2L 17913063 intergenic not near genes chr2L 17914156 intergenic CG43271 - chr2L_4_17910001 chr2L_17910001 KN35_1-HE 600 chr2L 17951942 17951976 chr2L 17953410 17953444 hobo 15 1468 9.0 3.0 6.0 2.1 1502 chr2L 17951942 intergenic CR44398 -,CR44397 - chr2L 17952693 intergenic not near genes chr2L 17953444 intergenic not near genes chr2L_15_17950001 chr2L_17950001 KN35_1-HE 601 chr2L 18028066 18028079 chr2L 18028154 18028167 6 88 3.0 15.0 9.0 0.6 101 chr2L 18028066 intron rdo + chr2L 18028116 intron rdo + chr2L 18028167 intron rdo + chr2L_6_18025001 chr2L_18025001 KN35_1-HE 602 chr2L 18051875 18051904 chr2L 18061023 18061052 roo 15 9148 8.0 2.0 5.0 2.5 9177 chr2L 18051875 intron rdo + chr2L 18056464 intron rdo + chr2L 18061052 intron rdo + chr2L_15_18055001 chr2L_18055001 KN35_1-HE 603 chr2L 18117820 18117832 chr2L 18117929 18117941 8 108 5.0 0.0 2.5 2.3 121 chr2L 18117820 intergenic not near genes chr2L 18117880 intergenic not near genes chr2L 18117941 intergenic not near genes chr2L_8_18115001 chr2L_18115001 KN35_1-HE 604 chr2L 18177775 18177805 chr2L 18177875 18177905 13 100 2.5 6.5 4.5 2.4 130 chr2L 18177775 intron CG42750 - chr2L 18177840 intron CG42750 - chr2L 18177905 intron CG42750 - chr2L_13_18175001 chr2L_18175001 KN35_1-HE 605 chr2L 18221372 18221404 chr2L 18221503 18221535 25 131 7.5 0.0 3.8 5.2 163 chr2L 18221372 intron CG42750 - chr2L 18221454 intron CG42750 - chr2L 18221535 intron CG42750 - chr2L_25_18220001 chr2L_18220001 KN35_1-HE 606 chr2L 18224929 18224961 chr2L 18225255 18225288 18 326 4.5 6.5 5.5 2.8 359 chr2L 18224929 intron CG42750 - chr2L 18225108 intron CG42750 - chr2L 18225288 intron CG42750 - chr2L_18_18225001 chr2L_18225001 KN35_1-HE 607 chr2L 18235060 18235098 chr2L 18235193 18235231 22 133 4.5 8.0 6.2 3.1 171 chr2L 18235060 intron CG42750 - chr2L 18235146 intron CG42750 - chr2L 18235231 intron CG42750 - chr2L_22_18235001 chr2L_18235001 KN35_1-HE 608 chr2L 18246467 18246494 chr2L 18246570 18246597 18 103 3.0 0.0 1.5 7.2 130 chr2L 18246467 intron CG42750 - chr2L 18246532 intron CG42750 - chr2L 18246597 intron CG42750 - chr2L_18_18245001 chr2L_18245001 KN35_1-HE 609 chr2L 18291527 18291559 chr2L 18291626 18291658 15 99 6.0 0.0 3.0 3.8 131 chr2L 18291527 intergenic CG43362 -,CR44693 +,CR44696 - chr2L 18291592 intergenic CR44693 +,CG43362 -,CR44696 - chr2L 18291658 intergenic CR44693 +,CG43362 -,CR44696 - chr2L_15_18290001 chr2L_18290001 KN35_1-HE 610 chr2L 18303975 18304007 chr2L 18304067 18304099 10 92 4.5 1.5 3.0 2.5 124 chr2L 18303975 intergenic not near genes chr2L 18304037 intergenic not near genes chr2L 18304099 intergenic not near genes chr2L_10_18300001 chr2L_18300001 KN35_1-HE 611 chr2L 18408022 18408051 chr2L 18412807 18412836 Doc 13 4785 6.0 0.0 3.0 3.2 4814 chr2L 18408022 intergenic not near genes chr2L 18410429 intergenic not near genes chr2L 18412836 intergenic not near genes chr2L_13_18410001 chr2L_18410001 KN35_1-HE 612 chr2L 18417989 18418000 chr2L 18418068 18418079 7 79 0.0 9.5 4.8 1.2 90 chr2L 18417989 intergenic not near genes chr2L 18418034 intergenic not near genes chr2L 18418079 intergenic not near genes chr2L_7_18415001 chr2L_18415001 KN35_1-HE 613 chr2L 18423852 18423869 chr2L 18423944 18423961 7 92 4.5 3.0 3.8 1.5 109 chr2L 18423852 intergenic not near genes chr2L 18423906 intergenic not near genes chr2L 18423961 intergenic not near genes chr2L_7_18420001 chr2L_18420001 KN35_1-HE 614 chr2L 18441162 18441166 chr2L 18441301 18441305 7 139 4.5 8.0 6.2 1.0 143 chr2L 18441162 intergenic RpS26 - chr2L 18441234 intergenic RpS26 - chr2L 18441305 intergenic RpS26 - chr2L_7_18440001 chr2L_18440001 KN35_1-HE 615 chr2L 18442343 18442373 chr2L 18442423 18442453 18 80 0.5 7.0 3.8 3.8 110 chr2L 18442343 3` UTR RpS26 - chr2L 18442398 3` UTR RpS26 - chr2L 18442453 3` UTR RpS26 - chr2L_18_18440001 chr2L_18440001 KN35_1-HE 616 chr2L 18443339 18443351 chr2L 18443424 18443436 8 85 8.0 3.5 5.8 1.2 97 chr2L 18443339 intergenic RpS26 - chr2L 18443388 intergenic RpS26 - chr2L 18443436 intergenic RpS26 - chr2L_8_18440001 chr2L_18440001 KN35_1-HE 617 chr2L 18449388 18449416 chr2L 18449490 18449518 9 102 2.5 3.5 3.0 2.2 130 chr2L 18449388 intergenic bsf -,ncm - chr2L 18449453 intergenic bsf -,ncm - chr2L 18449518 3` UTR bsf - chr2L_9_18445001 chr2L_18445001 KN35_1-HE 618 chr2L 18462360 18462479 chr2L 18462472 18462558 8 100 0.0 0.0 0.0 8.0 198 chr2L 18462360 intron let-7-C + chr2L 18462459 intron let-7-C + chr2L 18462558 intron let-7-C + chr2L_8_18460001 chr2L_18460001 KN35_1-HE 619 chr2L 18561556 18561576 chr2L 18561649 18561669 9 93 7.5 1.0 4.2 1.7 113 chr2L 18561556 intron Pde11 - chr2L 18561612 intron Pde11 - chr2L 18561669 intron Pde11 - chr2L_9_18560001 chr2L_18560001 KN35_1-HE 620 chr2L 18584754 18584779 chr2L 18584840 18584865 15 86 4.0 3.5 3.8 3.1 111 chr2L 18584754 intron Pde11 - chr2L 18584810 intron Pde11 - chr2L 18584865 intron Pde11 - chr2L_15_18580001 chr2L_18580001 KN35_1-HE 621 chr2L 18849517 18849547 chr2L 18849715 18849745 12 198 1.5 3.0 2.2 3.8 228 chr2L 18849517 intron CG17321 + chr2L 18849631 intron CG17321 + chr2L 18849745 intron CG17321 + chr2L_12_18845001 chr2L_18845001 KN35_1-HE 622 chr2L 18876864 18876883 chr2L 18876943 18876962 16 79 6.0 5.5 5.8 2.4 98 chr2L 18876864 intron tup - chr2L 18876913 intron tup - chr2L 18876962 intron tup - chr2L_16_18875001 chr2L_18875001 KN35_1-HE 623 chr2L 18893243 18893277 chr2L 18893364 18893398 20 121 7.0 5.0 6.0 2.9 155 chr2L 18893243 intergenic CR44737 + chr2L 18893320 intergenic CR44737 + chr2L 18893398 intergenic CR44737 + chr2L_20_18890001 chr2L_18890001 KN35_1-HE 624 chr2L 18895036 18895074 chr2L 18895146 18895184 23 110 4.5 8.0 6.2 3.2 148 chr2L 18895036 5` UTR CR44737 + chr2L 18895110 5` UTR CR44737 + chr2L 18895184 intron CR44737 + chr2L_23_18895001 chr2L_18895001 KN35_1-HE 625 chr2L 18901487 18901517 chr2L 18901568 18901598 16 80 5.5 4.5 5.0 2.7 111 chr2L 18901487 intergenic not near genes chr2L 18901542 intergenic not near genes chr2L 18901598 intergenic not near genes chr2L_16_18900001 chr2L_18900001 KN35_1-HE 626 chr2L 18926578 18926593 chr2L 18926686 18926701 4 108 1.0 2.5 1.8 1.4 123 chr2L 18926578 intron ssp3 - chr2L 18926640 intron ssp3 - chr2L 18926701 intron ssp3 - chr2L_4_18925001 chr2L_18925001 KN35_1-HE 627 chr2L 18981753 18981773 chr2L 18981831 18981851 11 78 8.0 5.5 6.8 1.4 98 chr2L 18981753 intron Swip-1 - chr2L 18981802 intron Swip-1 - chr2L 18981851 intron Swip-1 - chr2L_11_18980001 chr2L_18980001 KN35_1-HE 628 chr2L 19016241 19016270 chr2L 19016338 19016367 7 97 7.0 6.0 6.5 0.9 126 chr2L 19016241 intergenic not near genes chr2L 19016304 intergenic not near genes chr2L 19016367 intergenic not near genes chr2L_7_19015001 chr2L_19015001 KN35_1-HE 629 chr2L 19121552 19121565 chr2L 19121634 19121647 4 82 5.0 15.5 10.2 0.4 95 chr2L 19121552 3` UTR l(2)37Cc - chr2L 19121600 3` UTR l(2)37Cc - chr2L 19121647 3` UTR l(2)37Cc - chr2L_4_19120001 chr2L_19120001 KN35_1-HE 630 chr2L 19142389 19142422 chr2L 19142497 19142537 9 112 7.5 0.5 4.0 1.8 148 chr2L 19142389 intron brat + chr2L 19142463 intron brat + chr2L 19142537 intron brat + chr2L_9_19140001 chr2L_19140001 KN35_1-HE 631 chr2L 19147368 19147401 chr2L 19154404 19154437 297 16 7036 8.5 10.0 9.2 1.6 7069 chr2L 19147368 intron brat + chr2L 19150902 intron brat + chr2L 19154437 intron brat + chr2L_16_19150001 chr2L_19150001 KN35_1-HE 632 chr2L 19241055 19241088 chr2L 19241135 19241167 10 80 5.0 6.0 5.5 1.5 112 chr2L 19241055 intergenic not near genes chr2L 19241111 intergenic not near genes chr2L 19241167 intergenic not near genes chr2L_10_19240001 chr2L_19240001 KN35_1-HE 633 chr2L 19292608 19292631 chr2L 19292687 19292710 6 79 3.0 4.0 3.5 1.3 102 chr2L 19292608 intergenic not near genes chr2L 19292659 intergenic not near genes chr2L 19292710 intergenic not near genes chr2L_6_19290001 chr2L_19290001 KN35_1-HE 634 chr2L 19305581 19305614 chr2L 19305658 19305691 9 77 1.5 2.0 1.8 3.2 110 chr2L 19305581 intergenic not near genes chr2L 19305636 intergenic not near genes chr2L 19305691 intergenic not near genes chr2L_9_19305001 chr2L_19305001 KN35_1-HE 635 chr2L 19345012 19345050 chr2L 19357221 19357260 blood 22 12210 3.5 6.0 4.8 3.8 12248 chr2L 19345012 intron dnt - chr2L 19351136 intron dnt - chr2L 19357260 intron dnt - chr2L_22_19350001 chr2L_19350001 KN35_1-HE 636 chr2L 19357545 19357569 chr2L 19357636 19357660 17 91 7.0 5.5 6.2 2.4 115 chr2L 19357545 intron dnt - chr2L 19357602 intron dnt - chr2L 19357660 intron dnt - chr2L_17_19355001 chr2L_19355001 KN35_1-HE 637 chr2L 19405031 19405067 chr2L 19405110 19405146 21 79 6.0 6.0 6.0 3.0 115 chr2L 19405031 intron Pax - chr2L 19405088 intron Pax - chr2L 19405146 intron Pax - chr2L_21_19405001 chr2L_19405001 KN35_1-HE 638 chr2L 19405617 19405639 chr2L 19405708 19405730 10 91 4.5 6.0 5.2 1.6 113 chr2L 19405617 intron Pax - chr2L 19405674 intron Pax - chr2L 19405730 intron Pax - chr2L_10_19405001 chr2L_19405001 KN35_1-HE 639 chr2L 19437521 19437526 chr2L 19437614 19437619 6 93 2.5 2.5 2.5 1.7 98 chr2L 19437521 intron CG10237 - chr2L 19437570 intron CG10237 - chr2L 19437619 intron CG10237 - chr2L_6_19435001 chr2L_19435001 KN35_1-HE 640 chr2L 19466830 19466853 chr2L 19466910 19466933 12 80 5.0 4.5 4.8 2.1 103 chr2L 19466830 3` UTR tj + chr2L 19466882 3` UTR tj + chr2L 19466933 3` UTR tj + chr2L_12_19465001 chr2L_19465001 KN35_1-HE 641 chr2L 19559386 19559417 chr2L 19559463 19559494 14 77 3.5 0.0 1.8 5.0 108 chr2L 19559386 exon Tep5 + chr2L 19559440 exon Tep5 + chr2L 19559494 exon Tep5 + chr2L_14_19555001 chr2L_19555001 KN35_1-HE 642 chr2L 19560055 19560075 chr2L 19560178 19560198 7 123 3.0 3.5 3.2 1.7 143 chr2L 19560055 exon Tep5 + chr2L 19560126 exon Tep5 + chr2L 19560198 exon Tep5 + chr2L_7_19560001 chr2L_19560001 KN35_1-HE 643 chr2L 19560727 19560758 chr2L 19560830 19560861 10 103 6.0 5.0 5.5 1.5 134 chr2L 19560727 exon Tep5 + chr2L 19560794 exon Tep5 + chr2L 19560861 intron Tep5 + chr2L_10_19560001 chr2L_19560001 KN35_1-HE 644 chr2L 19588011 19588043 chr2L 19588138 19588170 13 127 5.5 5.5 5.5 2.0 159 chr2L 19588011 intron Lar + chr2L 19588090 intron Lar + chr2L 19588170 intron Lar + chr2L_13_19585001 chr2L_19585001 KN35_1-HE 645 chr2L 19601579 19601599 chr2L 19601657 19601677 9 78 0.0 6.0 3.0 2.2 98 chr2L 19601579 intron,intron Lar +,CR44978 - chr2L 19601628 intron,intron Lar +,CR44978 - chr2L 19601677 intron,intron Lar +,CR44978 - chr2L_9_19600001 chr2L_19600001 KN35_1-HE 646 chr2L 19619839 19619855 chr2L 19619913 19619936 7 80 2.0 0.0 1.0 3.5 97 chr2L 19619839 intron Lar + chr2L 19619888 intron Lar + chr2L 19619936 intron Lar + chr2L_7_19615001 chr2L_19615001 KN35_1-HE 647 chr2L 19620088 19620131 chr2L 19621078 19621121 jockey 25 990 6.5 6.0 6.2 3.5 1033 chr2L 19620088 intron Lar + chr2L 19620604 intron Lar + chr2L 19621121 intron Lar + chr2L_25_19620001 chr2L_19620001 KN35_1-HE 648 chr2L 19652567 19652600 chr2L 19674004 19674037 opus 27 21437 6.5 6.5 6.5 3.6 21470 chr2L 19652567 intron Lar + chr2L 19663302 intron Lar + chr2L 19674037 intron Lar + chr2L_27_19660001 chr2L_19660001 KN35_1-HE 649 chr2L 19703538 19703570 chr2L 19712675 19712707 roo 22 9137 6.5 8.5 7.5 2.6 9169 chr2L 19703538 intron Lar + chr2L 19708122 intron Lar + chr2L 19712707 intron Lar + chr2L_22_19705001 chr2L_19705001 KN35_1-HE 650 chr2L 19737352 19737386 chr2L 19740822 19740856 1360 13 3469 2.5 5.5 4.0 2.6 3504 chr2L 19737352 intergenic Nf-YB + chr2L 19739104 intergenic not near genes chr2L 19740856 intergenic not near genes chr2L_13_19735001 chr2L_19735001 KN35_1-HE 651 chr2L 19762813 19762837 chr2L 19763056 19763080 pogo 7 243 5.0 9.0 7.0 0.9 267 chr2L 19762813 5` UTR fbp - chr2L 19762946 intron fbp - chr2L 19763080 intron fbp - chr2L_7_19760001 chr2L_19760001 KN35_1-HE 652 chr2L 19773164 19773192 chr2L 19773252 19773280 7 88 4.0 4.5 4.2 1.3 116 chr2L 19773164 intergenic not near genes chr2L 19773222 intergenic not near genes chr2L 19773280 intergenic not near genes chr2L_7_19770001 chr2L_19770001 KN35_1-HE 653 chr2L 19799173 19799200 chr2L 19799313 19799340 8 140 2.0 1.0 1.5 3.2 167 chr2L 19799173 intron sick + chr2L 19799256 intron sick + chr2L 19799340 intron sick + chr2L_8_19795001 chr2L_19795001 KN35_1-HE 654 chr2L 19806547 19806563 chr2L 19806636 19806652 5 89 1.5 2.5 2.0 1.7 105 chr2L 19806547 intron sick + chr2L 19806600 intron sick + chr2L 19806652 intron sick + chr2L_5_19805001 chr2L_19805001 KN35_1-HE 655 chr2L 19898875 19898911 chr2L 19898957 19898991 22 81 3.5 5.0 4.2 4.2 116 chr2L 19898875 intron sick + chr2L 19898933 intron sick + chr2L 19898991 intron sick + chr2L_22_19895001 chr2L_19895001 KN35_1-HE 656 chr2L 19915689 19915713 chr2L 19915850 19915874 4 161 2.5 7.5 5.0 0.7 185 chr2L 19915689 intron sick + chr2L 19915782 intron sick + chr2L 19915874 intron sick + chr2L_4_19915001 chr2L_19915001 KN35_1-HE 657 chr2L 19916791 19916821 chr2L 19916877 19916907 17 86 6.5 6.5 6.5 2.3 116 chr2L 19916791 intron sick + chr2L 19916849 intron sick + chr2L 19916907 intron sick + chr2L_17_19915001 chr2L_19915001 KN35_1-HE 658 chr2L 20005874 20005905 chr2L 20010951 20010982 flea 14 5077 6.5 6.0 6.2 1.9 5108 chr2L 20005874 intron CG43861 - chr2L 20008428 intron CG43861 - chr2L 20010982 intron CG43861 - chr2L_14_20005001 chr2L_20005001 KN35_1-HE 659 chr2L 20046759 20046787 chr2L 20046845 20046873 17 86 5.0 5.0 5.0 2.8 114 chr2L 20046759 intron sNPF + chr2L 20046816 intron sNPF + chr2L 20046873 intron sNPF + chr2L_17_20045001 chr2L_20045001 KN35_1-HE 660 chr2L 20056646 20056656 chr2L 20056711 20056741 6 82 0.0 1.0 0.5 4.0 95 chr2L 20056646 intergenic sNPF + chr2L 20056694 intergenic sNPF + chr2L 20056741 intergenic sNPF + chr2L_6_20055001 chr2L_20055001 KN35_1-HE 661 chr2L 20236343 20236368 chr2L 20236633 20236658 9 290 2.0 7.0 4.5 1.6 315 chr2L 20236343 intergenic not near genes chr2L 20236500 intergenic not near genes chr2L 20236658 intergenic not near genes chr2L_9_20235001 chr2L_20235001 KN35_1-HE 662 chr2L 20272111 20272145 chr2L 20282823 20282857 copia 23 10712 4.5 4.5 4.5 4.2 10746 chr2L 20272111 intergenic not near genes chr2L 20277484 intergenic not near genes chr2L 20282857 intergenic not near genes chr2L_23_20275001 chr2L_20275001 KN35_1-HE 663 chr2L 20300011 20300020 chr2L 20300089 20300109 4 84 8.0 6.5 7.2 0.5 98 chr2L 20300011 intergenic not near genes chr2L 20300060 intergenic not near genes chr2L 20300109 intergenic not near genes chr2L_4_20300001 chr2L_20300001 KN35_1-HE 664 chr2L 20303159 20303191 chr2L 20310628 20310660 blood 9 7469 0.5 4.0 2.2 2.8 7501 chr2L 20303159 intergenic not near genes chr2L 20306910 intergenic not near genes chr2L 20310660 intergenic not near genes chr2L_9_20305001 chr2L_20305001 KN35_1-HE 665 chr2L 20320039 20320066 chr2L 20320144 20320171 17 105 3.0 4.0 3.5 3.8 132 chr2L 20320039 intron spir + chr2L 20320105 intron spir + chr2L 20320171 intron spir + chr2L_17_20320001 chr2L_20320001 KN35_1-HE 666 chr2L 20320845 20320865 chr2L 20321287 20321307 7 442 5.0 4.5 4.8 1.2 462 chr2L 20320845 intron spir + chr2L 20321076 intron spir + chr2L 20321307 intron spir + chr2L_7_20320001 chr2L_20320001 KN35_1-HE 667 chr2L 20372217 20372257 chr2L 20372468 20372499 pogo 9 247 0.0 8.5 4.2 1.7 282 chr2L 20372217 intergenic Ugt37a1 - chr2L 20372358 intergenic Ugt37a1 - chr2L 20372499 exon Ugt37a1 - chr2L_9_20370001 chr2L_20370001 KN35_1-HE 668 chr2L 20372865 20372900 chr2L 20373268 20373303 22 403 0.0 2.5 1.2 10.0 438 chr2L 20372865 exon Ugt37a1 - chr2L 20373084 exon Ugt37a1 - chr2L 20373303 exon Ugt37a1 - chr2L_22_20370001 chr2L_20370001 KN35_1-HE 669 chr2L 20413353 20413391 chr2L 20413437 20413475 17 84 3.5 3.5 3.5 3.8 122 chr2L 20413353 intron CG10947 - chr2L 20413414 intron CG10947 - chr2L 20413475 intron CG10947 - chr2L_17_20410001 chr2L_20410001 KN35_1-HE 670 chr2L 20498688 20498706 chr2L 20498788 20498806 11 100 4.5 5.5 5.0 1.8 118 chr2L 20498688 intergenic not near genes chr2L 20498747 intergenic not near genes chr2L 20498806 intergenic not near genes chr2L_11_20495001 chr2L_20495001 KN35_1-HE 671 chr2L 20500412 20500424 chr2L 20500493 20500505 4 81 5.5 4.0 4.8 0.7 93 chr2L 20500412 intergenic not near genes chr2L 20500458 intergenic not near genes chr2L 20500505 intergenic not near genes chr2L_4_20500001 chr2L_20500001 KN35_1-HE 672 chr2L 20524186 20524213 chr2L 20524269 20524296 10 83 7.5 0.0 3.8 2.1 110 chr2L 20524186 intergenic not near genes chr2L 20524241 intergenic not near genes chr2L 20524296 intergenic not near genes chr2L_10_20520001 chr2L_20520001 KN35_1-HE 673 chr2L 20539927 20540131 chr2L 20540015 20540288 5 102 17.5 3.0 10.2 0.4 361 chr2L 20539927 3` UTR CR45707 - chr2L 20540108 intergenic CR45707 - chr2L 20540288 intergenic CR45707 - chr2L_5_20540001 chr2L_20540001 KN35_1-HE 674 chr2L 20568613 20568645 chr2L 20569073 20569105 X-element 20 460 4.5 4.0 4.2 3.8 492 chr2L 20568613 intron CR45347 + chr2L 20568859 intron CR45347 + chr2L 20569105 intron CR45347 + chr2L_20_20565001 chr2L_20565001 KN35_1-HE 675 chr2L 20576219 20576251 chr2L 20583688 20583720 blood 16 7469 4.5 7.5 6.0 2.3 7501 chr2L 20576219 intergenic CR45347 + chr2L 20579970 intergenic not near genes chr2L 20583720 3` UTR CR44909 - chr2L_16_20575001 chr2L_20575001 KN35_1-HE 676 chr2L 20601784 20601814 chr2L 20601863 20601893 13 78 6.0 1.5 3.8 2.7 109 chr2L 20601784 intron CR44909 - chr2L 20601838 intron CR44909 - chr2L 20601893 intron CR44909 - chr2L_13_20600001 chr2L_20600001 KN35_1-HE 677 chr2L 20602716 20602748 chr2L 20602805 20602837 13 89 3.5 3.5 3.5 2.9 121 chr2L 20602716 intron CR44909 - chr2L 20602776 intron CR44909 - chr2L 20602837 intron CR44909 - chr2L_13_20600001 chr2L_20600001 KN35_1-HE 678 chr2L 20607638 20607669 chr2L 20607718 20607749 11 78 2.0 9.5 5.8 1.6 111 chr2L 20607638 intron,3` UTR CR44909 -,CR43608 - chr2L 20607694 intron,3` UTR CR44909 -,CR43608 - chr2L 20607749 intron,3` UTR CR44909 -,CR43608 - chr2L_11_20605001 chr2L_20605001 KN35_1-HE 679 chr2L 20639513 20639531 chr2L 20639790 20639808 INE-1 14 277 6.0 10.5 8.2 1.5 295 chr2L 20639513 intergenic not near genes chr2L 20639660 intergenic CG31680 + chr2L 20639808 intergenic CG31680 + chr2L_14_20635001 chr2L_20635001 KN35_1-HE 680 chr2L 20648181 20648185 chr2L 20648358 20648362 4 177 30.5 4.5 17.5 0.2 181 chr2L 20648181 intron Uhg3 + chr2L 20648272 5` UTR Uhg3 + chr2L 20648362 5` UTR Uhg3 + chr2L_4_20645001 chr2L_20645001 KN35_1-HE 681 chr2L 20708487 20708508 chr2L 20708620 20708641 15 133 4.0 2.0 3.0 3.8 154 chr2L 20708487 intron Hr38 - chr2L 20708564 intron Hr38 - chr2L 20708641 intron Hr38 - chr2L_15_20705001 chr2L_20705001 KN35_1-HE 682 chr2L 20715569 20715580 chr2L 20715648 20715659 8 79 11.0 11.0 11.0 0.7 90 chr2L 20715569 intergenic not near genes chr2L 20715614 intergenic not near genes chr2L 20715659 intergenic not near genes chr2L_8_20715001 chr2L_20715001 KN35_1-HE 683 chr2L 20813653 20813693 chr2L 20813757 20813797 14 102 4.0 6.5 5.2 2.3 144 chr2L 20813653 exon CG9328 + chr2L 20813725 3` UTR CG9328 + chr2L 20813797 3` UTR CG9328 + chr2L_14_20810001 chr2L_20810001 KN35_1-HE 684 chr2L 20822227 20822256 chr2L 20822312 20822341 9 85 2.5 5.0 3.8 1.9 114 chr2L 20822227 intergenic not near genes chr2L 20822284 intergenic not near genes chr2L 20822341 intergenic CG9331 + chr2L_9_20820001 chr2L_20820001 KN35_1-HE 685 chr2L 20824511 20824526 chr2L 20824681 20824696 6 170 1.0 2.0 1.5 2.4 185 chr2L 20824511 intron CG9331 + chr2L 20824604 intron CG9331 + chr2L 20824696 intron CG9331 + chr2L_6_20820001 chr2L_20820001 KN35_1-HE 686 chr2L 20835807 20835840 chr2L 20836525 20836558 Quasimodo 26 718 6.0 8.5 7.2 3.2 751 chr2L 20835807 5` UTR Oseg5 - chr2L 20836182 intergenic Oseg5 -,Spn38F - chr2L 20836558 intergenic Spn38F - chr2L_26_20835001 chr2L_20835001 KN35_1-HE 687 chr2L 20866414 20866442 chr2L 20866540 20866568 12 126 3.0 5.5 4.2 2.3 154 chr2L 20866414 intron CG9338 + chr2L 20866491 intron CG9338 + chr2L 20866568 intron CG9338 + chr2L_12_20865001 chr2L_20865001 KN35_1-HE 688 chr2L 20897567 20897597 chr2L 20897658 20897658 4 82 0.0 1.0 0.5 2.7 91 chr2L 20897567 intron,intron CG43739 -,sky - chr2L 20897612 intron,intron CG43739 -,sky - chr2L 20897658 intron,intron CG43739 -,sky - chr2L_4_20895001 chr2L_20895001 KN35_1-HE 689 chr2L 20974640 20974667 chr2L 20974731 20974758 17 91 4.5 4.0 4.2 3.3 118 chr2L 20974640 intron CG42238 - chr2L 20974699 intron CG42238 - chr2L 20974758 intron CG42238 - chr2L_17_20970001 chr2L_20970001 KN35_1-HE 690 chr2L 20976642 20976676 chr2L 20981458 20981492 X-element 16 4816 4.0 4.0 4.0 3.2 4850 chr2L 20976642 intron CG42238 - chr2L 20979067 intron CG42238 - chr2L 20981492 intron CG42238 - chr2L_16_20975001 chr2L_20975001 KN35_1-HE 691 chr2L 21020271 21020311 chr2L 21023949 21023989 NOF 15 3678 4.0 3.5 3.8 3.1 3718 chr2L 21020271 intron CG42238 - chr2L 21022130 intron CG42238 - chr2L 21023989 intron CG42238 - chr2L_15_21020001 chr2L_21020001 KN35_1-HE 692 chr2L 21034137 21034173 chr2L 21034219 21034255 34 82 7.5 7.0 7.2 4.1 118 chr2L 21034137 intron CG42238 - chr2L 21034196 intron CG42238 - chr2L 21034255 intron CG42238 - chr2L_34_21030001 chr2L_21030001 KN35_1-HE 693 chr2L 21041133 21041167 chr2L 21049395 21049418 Tirant 30 8261 4.0 4.5 4.2 5.8 8285 chr2L 21041133 intron CG42238 - chr2L 21045276 intron CG42238 - chr2L 21049418 intron CG42238 - chr2L_30_21045001 chr2L_21045001 KN35_1-HE 694 chr2L 21074922 21074946 chr2L 21075014 21075038 12 92 9.0 8.5 8.8 1.2 116 chr2L 21074922 intergenic tadr + chr2L 21074980 intergenic tadr + chr2L 21075038 intergenic tadr + chr2L_12_21070001 chr2L_21070001 KN35_1-HE 695 chr2L 21076408 21076438 chr2L 21076496 21076526 16 88 6.0 3.5 4.8 2.8 118 chr2L 21076408 intron tadr + chr2L 21076467 intron tadr + chr2L 21076526 intron tadr + chr2L_16_21075001 chr2L_21075001 KN35_1-HE 696 chr2L 21110650 21110684 chr2L 21110736 21110770 10 86 7.0 3.0 5.0 1.7 120 chr2L 21110650 intron Nhe2 + chr2L 21110710 intron Nhe2 + chr2L 21110770 intron Nhe2 + chr2L_10_21110001 chr2L_21110001 KN35_1-HE 697 chr2L 21240095 21240114 chr2L 21240202 21240221 10 107 3.5 3.0 3.2 2.4 126 chr2L 21240095 intron Hr39 + chr2L 21240158 intron Hr39 + chr2L 21240221 intron Hr39 + chr2L_10_21240001 chr2L_21240001 KN35_1-HE 698 chr2L 21276548 21276578 chr2L 21276649 21276679 11 100 6.0 3.0 4.5 2.0 131 chr2L 21276548 intron CG8671 + chr2L 21276614 intron CG8671 + chr2L 21276679 intron CG8671 + chr2L_11_21275001 chr2L_21275001 KN35_1-HE 699 chr2L 21286603 21286630 chr2L 21286682 21286709 9 79 6.0 3.5 4.8 1.6 106 chr2L 21286603 exon Mio - chr2L 21286656 intron Mio - chr2L 21286709 intron Mio - chr2L_9_21285001 chr2L_21285001 KN35_1-HE 700 chr2L 21307468 21307499 chr2L 21307551 21307582 10 83 5.5 2.0 3.8 2.1 114 chr2L 21307468 intron Mio - chr2L 21307525 intron Mio - chr2L 21307582 intron Mio - chr2L_10_21305001 chr2L_21305001 KN35_1-HE 701 chr2L 21333130 21333160 chr2L 21333228 21333258 10 98 7.5 0.5 4.0 2.0 128 chr2L 21333130 intron dimm + chr2L 21333194 intron dimm + chr2L 21333258 intron dimm + chr2L_10_21330001 chr2L_21330001 KN35_1-HE 702 chr2L 21347548 21347581 chr2L 21355021 21355054 blood 13 7473 6.0 6.0 6.0 1.9 7506 chr2L 21347548 intron Tsp39D + chr2L 21351301 intron Tsp39D + chr2L 21355054 intron Tsp39D + chr2L_13_21350001 chr2L_21350001 KN35_1-HE 703 chr2L 21377401 21377433 chr2L 21377479 21377511 15 78 2.0 6.0 4.0 3.0 110 chr2L 21377401 3` UTR CG8665 + chr2L 21377456 3` UTR CG8665 + chr2L 21377511 3` UTR CG8665 + chr2L_15_21375001 chr2L_21375001 KN35_1-HE 704 chr2L 21597030 21597059 chr2L 21604775 21604804 roo 12 7745 4.5 3.0 3.8 2.5 7774 chr2L 21597030 intergenic not near genes chr2L 21600917 intergenic not near genes chr2L 21604804 intergenic not near genes chr2L_12_21600001 chr2L_21600001 KN35_1-HE 705 chr2L 21653189 21653220 chr2L 21656494 21656525 invader4 15 3305 6.5 7.5 7.0 1.9 3336 chr2L 21653189 intergenic not near genes chr2L 21654857 intergenic not near genes chr2L 21656525 intergenic not near genes chr2L_15_21650001 chr2L_21650001 KN35_1-HE 706 chr2L 21684305 21684334 chr2L 21684569 21684598 13 264 2.0 7.5 4.8 2.2 293 chr2L 21684305 intron CG31619 + chr2L 21684452 intron CG31619 + chr2L 21684598 5` UTR CG31619 + chr2L_13_21680001 chr2L_21680001 KN35_1-HE 707 chr2L 21691825 21691858 chr2L 21698296 21698329 Burdock 15 6471 3.5 0.5 2.0 5.0 6504 chr2L 21691825 intron CG31619 + chr2L 21695077 intron CG31619 + chr2L 21698329 intron CG31619 + chr2L_15_21695001 chr2L_21695001 KN35_1-HE 708 chr2L 21702136 21702164 chr2L 21702440 21702468 16 304 4.0 3.0 3.5 3.6 332 chr2L 21702136 intron CG31619 + chr2L 21702302 intron CG31619 + chr2L 21702468 intron CG31619 + chr2L_16_21700001 chr2L_21700001 KN35_1-HE 709 chr2L 21750100 21750134 chr2L 21750421 21750458 5 323 3.0 2.0 2.5 1.4 358 chr2L 21750100 intron step - chr2L 21750279 intron step - chr2L 21750458 intron step - chr2L_5_21750001 chr2L_21750001 KN35_1-HE 710 chr2L 21754083 21754114 chr2L 21754190 21754221 17 107 4.5 1.5 3.0 4.2 138 chr2L 21754083 intron step - chr2L 21754152 intron step - chr2L 21754221 intron step - chr2L_17_21750001 chr2L_21750001 KN35_1-HE 711 chr2L 21788739 21788766 chr2L 21788818 21788845 7 79 5.5 5.5 5.5 1.1 106 chr2L 21788739 intron CG31612 - chr2L 21788792 intron CG31612 - chr2L 21788845 intron CG31612 - chr2L_7_21785001 chr2L_21785001 KN35_1-HE 712 chr2L 21806226 21806254 chr2L 21806330 21806358 13 104 4.0 6.5 5.2 2.1 132 chr2L 21806226 intergenic not near genes chr2L 21806292 intergenic not near genes chr2L 21806358 intergenic not near genes chr2L_13_21805001 chr2L_21805001 KN35_1-HE 713 chr2L 21830945 21830975 chr2L 21831025 21831055 15 80 2.5 3.5 3.0 3.8 110 chr2L 21830945 intron tsh + chr2L 21831000 intron tsh + chr2L 21831055 intron tsh + chr2L_15_21830001 chr2L_21830001 KN35_1-HE 714 chr2L 21852720 21852738 chr2L 21852799 21852817 7 79 5.5 6.5 6.0 1.0 97 chr2L 21852720 intergenic not near genes chr2L 21852768 intergenic not near genes chr2L 21852817 intergenic not near genes chr2L_7_21850001 chr2L_21850001 KN35_1-HE 715 chr2L 21876290 21876318 chr2L 21876381 21876410 9 89 1.5 4.5 3.0 2.2 120 chr2L 21876290 intergenic not near genes chr2L 21876350 intergenic not near genes chr2L 21876410 intergenic not near genes chr2L_9_21875001 chr2L_21875001 KN35_1-HE 716 chr2L 21981682 21981715 chr2L 21990848 21990881 roo 16 9166 5.5 5.0 5.2 2.6 9199 chr2L 21981682 exon CG2528 - chr2L 21986282 intron CG2528 - chr2L 21990881 exon CG2528 - chr2L_16_21985001 chr2L_21985001 KN35_1-HE 717 chr2L 22004111 22004142 chr2L 22004210 22004241 10 99 1.0 3.5 2.2 3.1 130 chr2L 22004111 intergenic not near genes chr2L 22004176 intergenic not near genes chr2L 22004241 intergenic not near genes chr2L_10_22000001 chr2L_22000001 KN35_1-HE 718 chr2L 22011917 22011949 chr2L 22011999 22012031 9 82 2.5 6.5 4.5 1.6 114 chr2L 22011917 intergenic not near genes chr2L 22011974 intergenic not near genes chr2L 22012031 intergenic not near genes chr2L_9_22010001 chr2L_22010001 KN35_1-HE 719 chr2L 22065390 22065422 chr2L 22065467 22065499 10 77 3.5 4.0 3.8 2.1 109 chr2L 22065390 intergenic CG42597 - chr2L 22065444 intergenic CG42597 - chr2L 22065499 intergenic CG42597 - chr2L_10_22065001 chr2L_22065001 KN35_1-HE 720 chr2L 22107376 22107397 chr2L 22107504 22107525 4 128 1.5 2.5 2.0 1.3 149 chr2L 22107376 intergenic CG10834 - chr2L 22107450 intergenic CG10834 - chr2L 22107525 intergenic CG10834 - chr2L_4_22105001 chr2L_22105001 KN35_1-HE 721 chr2L 22178040 22178067 chr2L 22178126 22178153 15 86 2.5 4.5 3.5 3.3 113 chr2L 22178040 intron CG3635 + chr2L 22178096 intron CG3635 + chr2L 22178153 intron CG3635 + chr2L_15_22175001 chr2L_22175001 KN35_1-HE 722 chr2L 22192021 22192052 chr2L 22192111 22192142 19 90 3.5 2.5 3.0 4.8 121 chr2L 22192021 intron Ir40a - chr2L 22192082 intron Ir40a - chr2L 22192142 intron Ir40a - chr2L_19_22190001 chr2L_22190001 KN35_1-HE 723 chr2L 22212135 22212161 chr2L 22212683 22212709 11 548 3.5 3.5 3.5 2.4 574 chr2L 22212135 intron Ir40a - chr2L 22212422 intron Ir40a - chr2L 22212709 intron Ir40a - chr2L_11_22210001 chr2L_22210001 KN35_1-HE 724 chr2L 22258615 22258647 chr2L 22260740 22260772 G6 25 2125 5.0 4.5 4.8 4.3 2157 chr2L 22258615 intergenic Tif-IA + chr2L 22259694 intergenic not near genes chr2L 22260772 intergenic not near genes chr2L_25_22255001 chr2L_22255001 KN35_1-HE 725 chr2L 22294353 22294380 chr2L 22294442 22294469 10 89 2.5 2.0 2.2 3.1 116 chr2L 22294353 intergenic not near genes chr2L 22294411 intergenic not near genes chr2L 22294469 intergenic not near genes chr2L_10_22290001 chr2L_22290001 KN35_1-HE 726 chr2L 22548922 22548942 chr2L 22550148 22550152 1360 11 1225 0.0 3.0 1.5 4.4 1230 chr2L 22548922 intergenic CG17490 + chr2L 22549537 intergenic not near genes chr2L 22550152 intergenic CG17493 + chr2L_11_22545001 chr2L_22545001 KN35_1-HE 727 chr2L 22581973 22582001 chr2L 22583763 22583791 S-element 12 1790 3.0 1.5 2.2 3.8 1818 chr2L 22581973 intron CG17494 + chr2L 22582882 intron CG17494 + chr2L 22583791 intron CG17494 + chr2L_12_22580001 chr2L_22580001 KN35_1-HE 728 chr2L 22674073 22674097 chr2L 22674151 22674175 17 78 7.5 5.5 6.5 2.3 102 chr2L 22674073 intron CG40006 - chr2L 22674124 intron CG40006 - chr2L 22674175 intron CG40006 - chr2L_17_22670001 chr2L_22670001 KN35_1-HE 729 chr2L 22676128 22676151 chr2L 22676367 22676390 9 239 5.5 4.5 5.0 1.5 262 chr2L 22676128 intron CG40006 - chr2L 22676259 intron CG40006 - chr2L 22676390 intron CG40006 - chr2L_9_22675001 chr2L_22675001 KN35_1-HE 730 chr2L 22679803 22679828 chr2L 22684576 22684601 F-element 11 4773 3.5 3.0 3.2 2.6 4798 chr2L 22679803 intron CG40006 - chr2L 22682202 intron CG40006 - chr2L 22684601 intron CG40006 - chr2L_11_22680001 chr2L_22680001 KN35_1-HE 731 chr2L 22724029 22724040 chr2L 22724121 22724132 11 92 4.0 0.0 2.0 3.7 103 chr2L 22724029 intron CG40006 - chr2L 22724080 intron CG40006 - chr2L 22724132 intron CG40006 - chr2L_11_22720001 chr2L_22720001 KN35_1-HE 732 chr2L 22727601 22727636 chr2L 22727722 22727771 8 130 2.5 0.0 1.2 3.6 170 chr2L 22727601 intron CG40006 - chr2L 22727686 intron CG40006 - chr2L 22727771 intron CG40006 - chr2L_8_22725001 chr2L_22725001 KN35_1-HE 733 chr2L 22776433 22776444 chr2L 22778223 22778234 S-element 4 1790 4.5 5.0 4.8 0.7 1801 chr2L 22776433 intergenic not near genes chr2L 22777334 intergenic not near genes chr2L 22778234 intergenic not near genes chr2L_4_22775001 chr2L_22775001 KN35_1-HE 734 chr2L 22968114 22968135 chr2L 22968203 22968224 7 89 1.0 7.5 4.2 1.3 110 chr2L 22968114 intergenic not near genes chr2L 22968169 intergenic not near genes chr2L 22968224 intergenic not near genes chr2L_7_22965001 chr2L_22965001 KN35_1-HE 735 chr2L 22974509 22974520 chr2L 22974594 22974605 6 85 5.0 9.5 7.2 0.7 96 chr2L 22974509 intergenic not near genes chr2L 22974557 intergenic not near genes chr2L 22974605 intergenic not near genes chr2L_6_22970001 chr2L_22970001 KN35_1-HE 736 chr2L 22981145 22981169 chr2L 22981413 22981437 11 268 3.0 3.0 3.0 2.8 292 chr2L 22981145 intergenic not near genes chr2L 22981291 intergenic not near genes chr2L 22981437 intergenic cta + chr2L_11_22980001 chr2L_22980001 KN35_1-HE 737 chr2L 23008192 23008229 chr2L 23008295 23008313 13 98 3.0 5.0 4.0 2.6 121 chr2L 23008192 intron Cht3 - chr2L 23008252 intron Cht3 - chr2L 23008313 intron Cht3 - chr2L_13_23005001 chr2L_23005001 KN35_1-HE 738 chr2R 469965 469982 chr2R 473207 473224 F-element 8 3241 5.0 12.0 8.5 0.8 3259 chr2R 469965 intergenic not near genes chr2R 471594 intergenic not near genes chr2R 473224 intergenic not near genes chr2R_8_470001 chr2R_470001 KN35_1-HE 739 chr2R 529320 529348 chr2R 537946 537974 Max-element 6 8625 2.5 4.0 3.2 1.4 8654 chr2R 529320 intron CG40378 + chr2R 533647 intron CG40378 + chr2R 537974 intron CG40378 + chr2R_6_530001 chr2R_530001 KN35_1-HE 740 chr2R 552758 552778 chr2R 553977 553997 1360 10 1217 6.0 5.0 5.5 1.5 1239 chr2R 552758 intron CG40378 + chr2R 553378 intron CG40378 + chr2R 553997 intron CG40378 + chr2R_10_550001 chr2R_550001 KN35_1-HE 741 chr2R 552779 552788 chr2R 553971 553979 1360 5 1204 3.0 5.0 4.0 1.0 1200 chr2R 552779 intron CG40378 + chr2R 553379 intron CG40378 + chr2R 553979 intron CG40378 + chr2R_5_550001 chr2R_550001 KN35_1-HE 742 chr2R 914634 914664 chr2R 914731 914761 8 97 2.0 1.0 1.5 3.2 127 chr2R 914634 intergenic not near genes chr2R 914698 intergenic not near genes chr2R 914761 intergenic not near genes chr2R_8_910001 chr2R_910001 KN35_1-HE 743 chr2R 932546 932572 chr2R 933000 933026 9 454 6.5 6.5 6.5 1.2 480 chr2R 932546 intron CG40498 - chr2R 932786 intron CG40498 - chr2R 933026 intron CG40498 - chr2R_9_930001 chr2R_930001 KN35_1-HE 744 chr2R 1082367 1082383 chr2R 1087143 1087160 Doc 5 4777 4.0 4.0 4.0 1.0 4793 chr2R 1082367 intron rl + chr2R 1084764 intron rl + chr2R 1087160 intron rl + chr2R_5_1080001 chr2R_1080001 KN35_1-HE 745 chr2R 1340065 1340080 chr2R 1340156 1340171 5 91 11.0 12.0 11.5 0.4 106 chr2R 1340065 intergenic not near genes chr2R 1340118 intergenic not near genes chr2R 1340171 intergenic not near genes chr2R_5_1340001 chr2R_1340001 KN35_1-HE 746 chr2R 1731936 1731960 chr2R 1732125 1732149 12 189 3.0 3.0 3.0 3.0 213 chr2R 1731936 intron CG41520 + chr2R 1732042 intron CG41520 + chr2R 1732149 intron CG41520 + chr2R_12_1730001 chr2R_1730001 KN35_1-HE 747 chr2R 1984875 1984900 chr2R 1984956 1984981 11 81 5.5 8.0 6.8 1.4 106 chr2R 1984875 intron CG17684 - chr2R 1984928 intron CG17684 - chr2R 1984981 intron CG17684 - chr2R_11_1980001 chr2R_1980001 KN35_1-HE 748 chr2R 2498984 2499015 chr2R 2508132 2508163 roo 12 9148 2.5 4.5 3.5 2.7 9179 chr2R 2498984 intron MFS17 - chr2R 2503574 intron MFS17 - chr2R 2508163 intron MFS17 - chr2R_12_2500001 chr2R_2500001 KN35_1-HE 749 chr2R 3089392 3089403 chr2R 3089492 3089503 4 100 3.0 8.0 5.5 0.6 111 chr2R 3089392 intron CG42596 + chr2R 3089448 intron CG42596 + chr2R 3089503 intron CG42596 + chr2R_4_3085001 chr2R_3085001 KN35_1-HE 750 chr2R 3144096 3144108 chr2R 3393375 3393387 Doc 5 249279 36.0 6.0 21.0 0.2 249291 chr2R 3144096 intron CG42596 + chr2R 3268742 intergenic not near genes chr2R 3393387 intergenic not near genes chr2R_5_3265001 chr2R_3265001 KN35_1-HE 751 chr2R 3252684 3252692 chr2R 3252783 3252791 4 99 6.0 0.0 3.0 1.0 107 chr2R 3252684 intergenic not near genes chr2R 3252738 intergenic not near genes chr2R 3252791 intergenic not near genes chr2R_4_3250001 chr2R_3250001 KN35_1-HE 752 chr2R 3291927 3292100 chr2R 3915097 3915262 10 623166 25.5 23.5 24.5 0.4 623335 chr2R 3291927 intergenic not near genes chr2R 3603594 intergenic not near genes chr2R 3915262 intron uex - chr2R_10_3600001 chr2R_3600001 KN35_1-HE 753 chr2R 3293741 3293771 chr2R 3293820 3293850 9 79 3.5 7.5 5.5 1.4 109 chr2R 3293741 intergenic not near genes chr2R 3293796 intergenic not near genes chr2R 3293850 intergenic not near genes chr2R_9_3290001 chr2R_3290001 KN35_1-HE 754 chr2R 3818931 3818940 chr2R 3819048 3819057 4 117 7.0 3.5 5.2 0.6 126 chr2R 3818931 intergenic not near genes chr2R 3818994 intergenic not near genes chr2R 3819057 intergenic not near genes chr2R_4_3815001 chr2R_3815001 KN35_1-HE 755 chr2R 4312951 4312984 chr2R 4313036 4313069 7 85 3.0 4.0 3.5 1.6 118 chr2R 4312951 intergenic not near genes chr2R 4313010 intergenic not near genes chr2R 4313069 intergenic not near genes chr2R_7_4310001 chr2R_4310001 KN35_1-HE 756 chr2R 4376497 4376523 chr2R 4376589 4376615 7 92 2.0 5.5 3.8 1.5 118 chr2R 4376497 intron Gprk1 - chr2R 4376556 intron Gprk1 - chr2R 4376615 intron Gprk1 - chr2R_7_4375001 chr2R_4375001 KN35_1-HE 757 chr2R 4518097 4518127 chr2R 4522238 4522268 11 4141 46.0 23.5 34.8 0.3 4171 chr2R 4518097 intergenic not near genes chr2R 4520182 intergenic not near genes chr2R 4522268 intergenic not near genes chr2R_11_4520001 chr2R_4520001 KN35_1-HE 758 chr2R 4604553 4604574 chr2R 4604633 4604654 7 80 4.5 3.0 3.8 1.5 101 chr2R 4604553 intron p120ctn + chr2R 4604604 intron p120ctn + chr2R 4604654 intron p120ctn + chr2R_7_4600001 chr2R_4600001 KN35_1-HE 759 chr2R 4621318 4621346 chr2R 4621859 4621887 4 541 2.5 4.0 3.2 1.0 569 chr2R 4621318 3` UTR CR44101 - chr2R 4621602 3` UTR CR44101 - chr2R 4621887 3` UTR CR44101 - chr2R_4_4620001 chr2R_4620001 KN35_1-HE 760 chr2R 4622952 4622984 chr2R 4624112 4624144 1360 9 1160 2.5 6.0 4.2 1.7 1192 chr2R 4622952 intergenic CR44101 - chr2R 4623548 intergenic not near genes chr2R 4624144 intergenic not near genes chr2R_9_4620001 chr2R_4620001 KN35_1-HE 761 chr2R 4624641 4624671 chr2R 4626547 4626577 Bica 9 1906 3.0 2.5 2.8 2.4 1936 chr2R 4624641 intergenic not near genes chr2R 4625609 intergenic not near genes chr2R 4626577 intergenic not near genes chr2R_9_4625001 chr2R_4625001 KN35_1-HE 762 chr2R 4688105 4688131 chr2R 4688199 4688225 16 94 4.0 2.5 3.2 3.8 120 chr2R 4688105 intergenic not near genes chr2R 4688165 intergenic not near genes chr2R 4688225 intergenic not near genes chr2R_16_4685001 chr2R_4685001 KN35_1-HE 763 chr2R 4736334 4736366 chr2R 4736620 4736652 14 286 3.0 5.0 4.0 2.8 318 chr2R 4736334 intergenic not near genes chr2R 4736493 intergenic not near genes chr2R 4736652 intergenic not near genes chr2R_14_4735001 chr2R_4735001 KN35_1-HE 764 chr2R 4783416 4783443 chr2R 4783495 4783522 8 79 3.0 3.5 3.2 1.9 106 chr2R 4783416 intergenic not near genes chr2R 4783469 intergenic not near genes chr2R 4783522 intergenic not near genes chr2R_8_4780001 chr2R_4780001 KN35_1-HE 765 chr2R 4821217 4821244 chr2R 4821304 4821331 8 87 2.5 6.0 4.2 1.5 114 chr2R 4821217 intron CG17528 - chr2R 4821274 intron CG17528 - chr2R 4821331 intron CG17528 - chr2R_8_4820001 chr2R_4820001 KN35_1-HE 766 chr2R 4838869 4838906 chr2R 4840393 4840430 transib2 13 1524 5.5 7.5 6.5 1.7 1561 chr2R 4838869 intergenic not near genes chr2R 4839650 intergenic not near genes chr2R 4840430 intergenic not near genes chr2R_13_4835001 chr2R_4835001 KN35_1-HE 767 chr2R 4933354 4933392 chr2R 4933919 4933957 6 565 2.5 0.5 1.5 2.4 603 chr2R 4933354 intron Ir41a + chr2R 4933656 intron Ir41a + chr2R 4933957 intron Ir41a + chr2R_6_4930001 chr2R_4930001 KN35_1-HE 768 chr2R 4942067 4942086 chr2R 4942193 4942212 4 126 0.5 2.0 1.2 1.8 145 chr2R 4942067 intron Ir41a + chr2R 4942140 intron Ir41a + chr2R 4942212 intron Ir41a + chr2R_4_4940001 chr2R_4940001 KN35_1-HE 769 chr2R 5075927 5075963 chr2R 5076089 5076124 6 161 42.5 47.5 45.0 0.1 197 chr2R 5075927 intergenic not near genes chr2R 5076026 intergenic not near genes chr2R 5076124 intergenic not near genes chr2R_6_5075001 chr2R_5075001 KN35_1-HE 770 chr2R 5125245 5125276 chr2R 5125564 5125595 8 317 4.0 3.0 3.5 1.8 350 chr2R 5125245 intron gus - chr2R 5125420 intron gus - chr2R 5125595 intron gus - chr2R_8_5125001 chr2R_5125001 KN35_1-HE 771 chr2R 5140450 5140481 chr2R 5140537 5140568 7 87 3.0 1.0 2.0 2.3 118 chr2R 5140450 intergenic not near genes chr2R 5140509 intergenic not near genes chr2R 5140568 intergenic not near genes chr2R_7_5140001 chr2R_5140001 KN35_1-HE 772 chr2R 5180235 5180269 chr2R 5180343 5180377 17 108 3.0 3.0 3.0 4.2 142 chr2R 5180235 intron Nipped-A - chr2R 5180306 intron Nipped-A - chr2R 5180377 intron Nipped-A - chr2R_17_5180001 chr2R_5180001 KN35_1-HE 773 chr2R 5192241 5192243 chr2R 5192338 5192346 4 102 3.5 5.0 4.2 0.8 105 chr2R 5192241 intron Nipped-A - chr2R 5192294 intron Nipped-A - chr2R 5192346 intron Nipped-A - chr2R_4_5190001 chr2R_5190001 KN35_1-HE 774 chr2R 5209779 5209813 chr2R 5210313 5210347 20 534 3.5 4.0 3.8 4.2 568 chr2R 5209779 intron Nipped-A - chr2R 5210063 intron Nipped-A - chr2R 5210347 intron Nipped-A - chr2R_20_5210001 chr2R_5210001 KN35_1-HE 775 chr2R 5237355 5237369 chr2R 5237438 5237452 7 83 2.5 0.0 1.2 3.2 97 chr2R 5237355 intron Nipped-A - chr2R 5237404 intron Nipped-A - chr2R 5237452 intron Nipped-A - chr2R_7_5235001 chr2R_5235001 KN35_1-HE 776 chr2R 5410313 5410347 chr2R 5410469 5410503 17 156 4.5 5.0 4.8 2.9 190 chr2R 5410313 intergenic not near genes chr2R 5410408 intergenic not near genes chr2R 5410503 intergenic not near genes chr2R_17_5410001 chr2R_5410001 KN35_1-HE 777 chr2R 5417991 5418026 chr2R 5420624 5420659 Burdock 11 2632 6.5 6.0 6.2 1.5 2668 chr2R 5417991 intron laccase2 + chr2R 5419325 intron laccase2 + chr2R 5420659 intron laccase2 + chr2R_11_5415001 chr2R_5415001 KN35_1-HE 778 chr2R 5426662 5426697 chr2R 5426741 5426776 4 79 3.0 3.0 3.0 1.0 114 chr2R 5426662 intron laccase2 + chr2R 5426719 intron laccase2 + chr2R 5426776 intron laccase2 + chr2R_4_5425001 chr2R_5425001 KN35_1-HE 779 chr2R 5476354 5476385 chr2R 5476899 5476930 15 545 2.5 6.0 4.2 2.9 576 chr2R 5476354 intron CG30440 - chr2R 5476642 intron CG30440 - chr2R 5476930 intron CG30440 - chr2R_15_5475001 chr2R_5475001 KN35_1-HE 780 chr2R 5491664 5491695 chr2R 5491758 5491789 11 94 3.0 3.5 3.2 2.6 125 chr2R 5491664 intron CG30440 - chr2R 5491726 intron CG30440 - chr2R 5491789 intron CG30440 - chr2R_11_5490001 chr2R_5490001 KN35_1-HE 781 chr2R 5509516 5509549 chr2R 5509613 5509646 10 97 4.0 4.5 4.2 1.9 130 chr2R 5509516 intron CG30438 + chr2R 5509581 intron CG30438 + chr2R 5509646 intron CG30438 + chr2R_10_5505001 chr2R_5505001 KN35_1-HE 782 chr2R 5527434 5527457 chr2R 5527532 5527555 12 98 2.5 5.0 3.8 2.5 121 chr2R 5527434 intron CG30438 + chr2R 5527494 intron CG30438 + chr2R 5527555 intron CG30438 + chr2R_12_5525001 chr2R_5525001 KN35_1-HE 783 chr2R 5543199 5543223 chr2R 5547284 5547308 invader1 8 4085 0.0 9.0 4.5 1.5 4109 chr2R 5543199 intron CG30438 + chr2R 5545254 intron CG30438 + chr2R 5547308 intron CG30438 + chr2R_8_5545001 chr2R_5545001 KN35_1-HE 784 chr2R 5581399 5581426 chr2R 5627609 5627636 18 46210 5.5 20.0 12.8 1.3 46237 chr2R 5581399 intergenic not near genes chr2R 5604518 intron Fis1 - chr2R 5627636 intergenic not near genes chr2R_18_5600001 chr2R_5600001 KN35_1-HE 785 chr2R 5675196 5675230 chr2R 5675535 5675569 8 338 2.5 3.0 2.8 2.1 373 chr2R 5675196 intergenic not near genes chr2R 5675382 intergenic not near genes chr2R 5675569 intergenic not near genes chr2R_8_5675001 chr2R_5675001 KN35_1-HE 786 chr2R 5694439 5694473 chr2R 5694536 5694570 14 97 4.5 3.0 3.8 2.9 131 chr2R 5694439 intergenic not near genes chr2R 5694504 intergenic not near genes chr2R 5694570 intergenic not near genes chr2R_14_5690001 chr2R_5690001 KN35_1-HE 787 chr2R 5724996 5725023 chr2R 5725227 5725254 6 231 4.5 3.5 4.0 1.2 258 chr2R 5724996 intron ap - chr2R 5725125 intron ap - chr2R 5725254 intron ap - chr2R_6_5725001 chr2R_5725001 KN35_1-HE 788 chr2R 5749901 5749929 chr2R 5750127 5750155 11 226 4.0 3.5 3.8 2.3 254 chr2R 5749901 intergenic not near genes chr2R 5750028 intergenic not near genes chr2R 5750155 intergenic not near genes chr2R_11_5750001 chr2R_5750001 KN35_1-HE 789 chr2R 5765393 5765398 chr2R 5765472 5765477 5 79 0.0 6.0 3.0 1.2 84 chr2R 5765393 intron Gp210 + chr2R 5765435 intron Gp210 + chr2R 5765477 intron Gp210 + chr2R_5_5765001 chr2R_5765001 KN35_1-HE 790 chr2R 5777031 5777052 chr2R 5777136 5777157 8 104 5.0 4.5 4.8 1.4 126 chr2R 5777031 intron ZnT41F - chr2R 5777094 intron ZnT41F - chr2R 5777157 intron ZnT41F - chr2R_8_5775001 chr2R_5775001 KN35_1-HE 791 chr2R 5814036 5814071 chr2R 5814114 5814148 16 77 3.5 3.0 3.2 3.8 112 chr2R 5814036 intron dpr12 + chr2R 5814092 intron dpr12 + chr2R 5814148 intron dpr12 + chr2R_16_5810001 chr2R_5810001 KN35_1-HE 792 chr2R 5864335 5864361 chr2R 5864419 5864445 26 84 5.5 8.0 6.8 3.3 110 chr2R 5864335 intergenic not near genes chr2R 5864390 intergenic not near genes chr2R 5864445 intergenic not near genes chr2R_26_5860001 chr2R_5860001 KN35_1-HE 793 chr2R 5869278 5869309 chr2R 5874355 5874386 flea 12 5077 3.5 7.0 5.2 1.9 5108 chr2R 5869278 intergenic not near genes chr2R 5871832 intergenic not near genes chr2R 5874386 intergenic not near genes chr2R_12_5870001 chr2R_5870001 KN35_1-HE 794 chr2R 5878922 5878959 chr2R 5879003 5879040 24 81 2.0 3.5 2.8 6.3 118 chr2R 5878922 intergenic CG44438 - chr2R 5878981 intergenic CG44438 - chr2R 5879040 intergenic CG44438 - chr2R_24_5875001 chr2R_5875001 KN35_1-HE 795 chr2R 5885364 5885375 chr2R 5885494 5885505 5 130 3.5 5.5 4.5 0.9 141 chr2R 5885364 5` UTR CR44125 + chr2R 5885434 5` UTR CR44125 + chr2R 5885505 5` UTR CR44125 + chr2R_5_5885001 chr2R_5885001 KN35_1-HE 796 chr2R 5902155 5902184 chr2R 5909715 5909744 17.6 24 7560 6.0 9.5 7.8 2.7 7589 chr2R 5902155 intron CG43366 + chr2R 5905950 intron CG43366 + chr2R 5909744 intron CG43366 + chr2R_24_5905001 chr2R_5905001 KN35_1-HE 797 chr2R 5935942 5935974 chr2R 5936380 5936412 12 438 5.0 4.0 4.5 2.2 470 chr2R 5935942 intergenic not near genes chr2R 5936177 intergenic not near genes chr2R 5936412 intergenic not near genes chr2R_12_5935001 chr2R_5935001 KN35_1-HE 798 chr2R 5947934 5947966 chr2R 5948086 5948118 15 152 5.5 0.0 2.8 3.9 184 chr2R 5947934 intergenic not near genes chr2R 5948026 intergenic not near genes chr2R 5948118 intergenic not near genes chr2R_15_5945001 chr2R_5945001 KN35_1-HE 799 chr2R 5968498 5968527 chr2R 5968584 5968613 9 86 5.0 5.5 5.2 1.5 115 chr2R 5968498 intergenic not near genes chr2R 5968556 intergenic not near genes chr2R 5968613 intergenic BubR1 - chr2R_9_5965001 chr2R_5965001 KN35_1-HE 800 chr2R 6033439 6033473 chr2R 6033525 6033559 7 86 5.0 5.5 5.2 1.1 120 chr2R 6033439 intron SCAP - chr2R 6033499 intron SCAP - chr2R 6033559 intron SCAP - chr2R_7_6030001 chr2R_6030001 KN35_1-HE 801 chr2R 6050302 6050310 chr2R 6050396 6050404 5 94 14.0 0.0 7.0 0.6 102 chr2R 6050302 intergenic CG34212 - chr2R 6050353 intergenic CG34212 - chr2R 6050404 intergenic CG34212 - chr2R_5_6050001 chr2R_6050001 KN35_1-HE 802 chr2R 6065751 6065781 chr2R 6065864 6065894 23 112 4.5 4.5 4.5 4.2 143 chr2R 6065751 intron CCHa2-R + chr2R 6065822 intron CCHa2-R + chr2R 6065894 exon CCHa2-R + chr2R_23_6065001 chr2R_6065001 KN35_1-HE 803 chr2R 6088369 6088387 chr2R 6088463 6088481 13 94 5.5 6.5 6.0 1.9 112 chr2R 6088369 intergenic not near genes chr2R 6088425 intergenic not near genes chr2R 6088481 intergenic not near genes chr2R_13_6085001 chr2R_6085001 KN35_1-HE 804 chr2R 6096713 6096751 chr2R 6101912 6101938 BS 16 5194 7.0 4.0 5.5 2.5 5225 chr2R 6096713 intron EcR - chr2R 6099326 intron EcR - chr2R 6101938 intron EcR - chr2R_16_6095001 chr2R_6095001 KN35_1-HE 805 chr2R 6116133 6116155 chr2R 6116212 6116234 7 79 7.5 3.5 5.5 1.1 101 chr2R 6116133 intron EcR - chr2R 6116184 intron EcR - chr2R 6116234 intron EcR - chr2R_7_6115001 chr2R_6115001 KN35_1-HE 806 chr2R 6143077 6143104 chr2R 6143246 6143273 8 169 5.0 5.0 5.0 1.3 196 chr2R 6143077 intron EcR - chr2R 6143175 intron EcR - chr2R 6143273 intron EcR - chr2R_8_6140001 chr2R_6140001 KN35_1-HE 807 chr2R 6144163 6144181 chr2R 6144410 6144428 12 247 2.5 6.5 4.5 2.2 265 chr2R 6144163 intron EcR - chr2R 6144296 intron EcR - chr2R 6144428 intron EcR - chr2R_12_6140001 chr2R_6140001 KN35_1-HE 808 chr2R 6173551 6173575 chr2R 6173630 6173654 8 79 4.0 4.0 4.0 1.6 103 chr2R 6173551 intergenic Cyp6w1 + chr2R 6173602 intergenic Cyp6w1 + chr2R 6173654 intergenic Cyp6w1 + chr2R_8_6170001 chr2R_6170001 KN35_1-HE 809 chr2R 6178119 6178144 chr2R 6178246 6178271 8 127 2.0 3.5 2.8 2.1 152 chr2R 6178119 intergenic not near genes chr2R 6178195 intergenic not near genes chr2R 6178271 intergenic not near genes chr2R_8_6175001 chr2R_6175001 KN35_1-HE 810 chr2R 6178677 6178712 chr2R 6178765 6178800 17 88 3.0 1.5 2.2 5.3 123 chr2R 6178677 intergenic not near genes chr2R 6178738 intergenic not near genes chr2R 6178800 intergenic not near genes chr2R_17_6175001 chr2R_6175001 KN35_1-HE 811 chr2R 3998867 3998873 chr2R 6486841 6486847 4 2487974 16.0 19.0 17.5 0.2 2487980 chr2R 3998867 intergenic not near genes chr2R 5242857 intron Nipped-A - chr2R 6486847 intergenic not near genes chr2R_4_5240001 chr2R_5240001 KN35_1-HE 812 chr2R 6494528 6494551 chr2R 6499291 6499314 F-element 4 4763 2.0 2.5 2.2 1.2 4786 chr2R 6494528 intergenic not near genes chr2R 6496921 intergenic not near genes chr2R 6499314 intergenic not near genes chr2R_4_6495001 chr2R_6495001 KN35_1-HE 813 chr2R 6530771 6530794 chr2R 6530852 6530875 13 81 5.0 4.5 4.8 2.2 104 chr2R 6530771 intron jing + chr2R 6530823 intron jing + chr2R 6530875 intron jing + chr2R_13_6530001 chr2R_6530001 KN35_1-HE 814 chr2R 6579770 6579805 chr2R 6584857 6584892 flea 13 5087 3.5 5.5 4.5 2.4 5122 chr2R 6579770 intron jing + chr2R 6582331 intron jing + chr2R 6584892 intron jing + chr2R_13_6580001 chr2R_6580001 KN35_1-HE 815 chr2R 6712584 6712599 chr2R 6712682 6712697 8 98 9.0 5.0 7.0 1.0 113 chr2R 6712584 intron,intron CG3409 -,CG45092 - chr2R 6712640 intron,intron CG3409 -,CG45092 - chr2R 6712697 intron,intron CG3409 -,CG45092 - chr2R_8_6710001 chr2R_6710001 KN35_1-HE 816 chr2R 6723550 6723587 chr2R 6723634 6723671 26 84 4.0 6.5 5.2 4.2 121 chr2R 6723550 intron l(2)01289 - chr2R 6723610 intron l(2)01289 - chr2R 6723671 exon l(2)01289 - chr2R_26_6720001 chr2R_6720001 KN35_1-HE 817 chr2R 6841272 6841290 chr2R 6841375 6841393 5 103 4.0 4.5 4.2 1.0 121 chr2R 6841272 intergenic CR44166 + chr2R 6841332 intergenic CR44166 + chr2R 6841393 intergenic CR44166 + chr2R_5_6840001 chr2R_6840001 KN35_1-HE 818 chr2R 6871781 6871801 chr2R 6871872 6871892 4 91 2.5 2.0 2.2 1.2 111 chr2R 6871781 intron coro - chr2R 6871836 intron coro - chr2R 6871892 intron coro - chr2R_4_6870001 chr2R_6870001 KN35_1-HE 819 chr2R 6876222 6876249 chr2R 6876305 6876332 8 83 2.0 2.5 2.2 2.5 110 chr2R 6876222 intron,intron CR44169 +,Spn42Da - chr2R 6876277 5` UTR,intron CR44169 +,Spn42Da - chr2R 6876332 5` UTR,intron CR44169 +,Spn42Da - chr2R_8_6875001 chr2R_6875001 KN35_1-HE 820 chr2R 6912841 6912876 chr2R 6912980 6913009 17 139 4.0 5.0 4.5 3.1 168 chr2R 6912841 intron CG30158 + chr2R 6912925 intron CG30158 + chr2R 6913009 intron CG30158 + chr2R_17_6910001 chr2R_6910001 KN35_1-HE 821 chr2R 6947887 6947915 chr2R 6948214 6948242 13 326 2.5 3.0 2.8 3.4 355 chr2R 6947887 intron,intron mim -,CheB42c - chr2R 6948064 intron,intron mim -,CheB42c - chr2R 6948242 intron,intron mim -,CheB42c - chr2R_13_6945001 chr2R_6945001 KN35_1-HE 822 chr2R 6952165 6952184 chr2R 6959746 6959765 opus 7 7581 5.0 4.5 4.8 1.2 7600 chr2R 6952165 intron,intron mim -,CheB42c - chr2R 6955965 intron,intron mim -,CheB42c - chr2R 6959765 intron,intron mim -,CheB42c - chr2R_7_6955001 chr2R_6955001 KN35_1-HE 823 chr2R 6965260 6965267 chr2R 6965347 6965354 5 87 9.5 3.5 6.5 0.7 94 chr2R 6965260 intron,intron mim -,CheB42c - chr2R 6965307 intron,intron mim -,CheB42c - chr2R 6965354 intron,intron mim -,CheB42c - chr2R_5_6965001 chr2R_6965001 KN35_1-HE 824 chr2R 6965269 6965294 chr2R 6965345 6965381 10 86 4.5 3.0 3.8 2.1 112 chr2R 6965269 intron,intron mim -,CheB42c - chr2R 6965325 intron,intron mim -,CheB42c - chr2R 6965381 intron,intron mim -,CheB42c - chr2R_10_6965001 chr2R_6965001 KN35_1-HE 825 chr2R 6983068 6983104 chr2R 6983155 6983190 11 87 0.0 3.0 1.5 4.4 122 chr2R 6983068 intron,intron vimar -,CG30156 - chr2R 6983129 intron,intron vimar -,CG30156 - chr2R 6983190 intron,intron vimar -,CG30156 - chr2R_11_6980001 chr2R_6980001 KN35_1-HE 826 chr2R 7052465 7052490 chr2R 7052552 7052577 13 87 4.0 7.5 5.8 1.9 112 chr2R 7052465 intergenic Tsp42En + chr2R 7052521 intergenic Tsp42En + chr2R 7052577 intergenic Tsp42En + chr2R_13_7050001 chr2R_7050001 KN35_1-HE 827 chr2R 7067593 7067607 chr2R 7067678 7067692 8 85 8.5 1.0 4.8 1.4 99 chr2R 7067593 intergenic not near genes chr2R 7067642 intergenic not near genes chr2R 7067692 intergenic not near genes chr2R_8_7065001 chr2R_7065001 KN35_1-HE 828 chr2R 7083654 7083674 chr2R 7083759 7083779 4 105 5.5 6.0 5.8 0.6 125 chr2R 7083654 intergenic not near genes chr2R 7083716 intergenic not near genes chr2R 7083779 intergenic not near genes chr2R_4_7080001 chr2R_7080001 KN35_1-HE 829 chr2R 7091208 7091244 chr2R 7091291 7091327 14 83 6.5 3.0 4.8 2.4 119 chr2R 7091208 intron esn + chr2R 7091268 intron esn + chr2R 7091327 intron esn + chr2R_14_7090001 chr2R_7090001 KN35_1-HE 830 chr2R 7181008 7181021 chr2R 7181085 7181098 9 77 8.0 3.5 5.8 1.3 90 chr2R 7181008 intron pk + chr2R 7181053 intron pk + chr2R 7181098 intron pk + chr2R_9_7180001 chr2R_7180001 KN35_1-HE 831 chr2R 7196565 7196595 chr2R 7201341 7201371 F-element 14 4776 1.5 6.0 3.8 2.9 4806 chr2R 7196565 intron pk + chr2R 7198968 intron pk + chr2R 7201371 intron pk + chr2R_14_7195001 chr2R_7195001 KN35_1-HE 832 chr2R 7218206 7218212 chr2R 7218301 7218307 4 95 5.0 6.5 5.8 0.6 101 chr2R 7218206 intron pk + chr2R 7218256 intron pk + chr2R 7218307 intron pk + chr2R_4_7215001 chr2R_7215001 KN35_1-HE 833 chr2R 7226187 7226200 chr2R 7227694 7227707 5 1507 6.5 12.5 9.5 0.5 1520 chr2R 7226187 intergenic not near genes chr2R 7226947 intergenic not near genes chr2R 7227707 intergenic not near genes chr2R_5_7225001 chr2R_7225001 KN35_1-HE 834 chr2R 7235820 7235852 chr2R 7240913 7240945 jockey 10 5093 3.0 2.0 2.5 2.9 5125 chr2R 7235820 intergenic not near genes chr2R 7238382 intergenic not near genes chr2R 7240945 intergenic not near genes chr2R_10_7235001 chr2R_7235001 KN35_1-HE 835 chr2R 7285061 7285094 chr2R 7285163 7285196 12 102 2.5 5.0 3.8 2.5 135 chr2R 7285061 intron pwn + chr2R 7285128 intron pwn + chr2R 7285196 intron pwn + chr2R_12_7285001 chr2R_7285001 KN35_1-HE 836 chr2R 7290188 7290224 chr2R 7290291 7290327 11 103 2.5 5.0 3.8 2.3 139 chr2R 7290188 intron pwn + chr2R 7290258 intron pwn + chr2R 7290327 intron pwn + chr2R_11_7290001 chr2R_7290001 KN35_1-HE 837 chr2R 7404252 7404268 chr2R 7404489 7404505 4 237 6.5 2.0 4.2 0.8 253 chr2R 7404252 intron,exon Eaf -,CG43267 + chr2R 7404378 intron,3` UTR Eaf -,CG43267 + chr2R 7404505 intron Eaf - chr2R_4_7400001 chr2R_7400001 KN35_1-HE 838 chr2R 7405262 7405293 chr2R 7405546 7405577 10 284 2.5 4.5 3.5 2.2 315 chr2R 7405262 intron Eaf - chr2R 7405420 intron Eaf - chr2R 7405577 intron Eaf - chr2R_10_7405001 chr2R_7405001 KN35_1-HE 839 chr2R 7418139 7418169 chr2R 7418219 7418249 12 80 3.5 3.0 3.2 2.9 110 chr2R 7418139 intergenic not near genes chr2R 7418194 intergenic not near genes chr2R 7418249 intergenic not near genes chr2R_12_7415001 chr2R_7415001 KN35_1-HE 840 chr2R 7434893 7434912 chr2R 7439195 7439213 Juan 9 4302 7.0 6.5 6.8 1.2 4320 chr2R 7434893 intergenic so + chr2R 7437053 intergenic not near genes chr2R 7439213 intergenic not near genes chr2R_9_7435001 chr2R_7435001 KN35_1-HE 841 chr2R 7452081 7452116 chr2R 7452164 7452199 13 83 7.0 2.0 4.5 2.4 118 chr2R 7452081 5` UTR CR45320 + chr2R 7452140 5` UTR CR45320 + chr2R 7452199 5` UTR CR45320 + chr2R_13_7450001 chr2R_7450001 KN35_1-HE 842 chr2R 7510627 7510653 chr2R 7510718 7510744 11 91 2.0 5.0 3.5 2.4 117 chr2R 7510627 3` UTR az2 - chr2R 7510686 3` UTR az2 - chr2R 7510744 3` UTR az2 - chr2R_11_7510001 chr2R_7510001 KN35_1-HE 843 chr2R 7551682 7551719 chr2R 7551774 7551811 18 92 4.5 3.0 3.8 3.8 129 chr2R 7551682 intron Corin + chr2R 7551746 intron Corin + chr2R 7551811 intron Corin + chr2R_18_7550001 chr2R_7550001 KN35_1-HE 844 chr2R 7608405 7608434 chr2R 7613609 7613637 I-element 21 5204 8.5 0.5 4.5 3.8 5232 chr2R 7608405 intron CG1358 - chr2R 7611021 intron CG1358 - chr2R 7613637 intron CG1358 - chr2R_21_7610001 chr2R_7610001 KN35_1-HE 845 chr2R 7642130 7642165 chr2R 7642379 7642414 9 249 4.5 2.5 3.5 2.0 284 chr2R 7642130 intron CG43340 + chr2R 7642272 intron CG43340 + chr2R 7642414 intron CG43340 + chr2R_9_7640001 chr2R_7640001 KN35_1-HE 846 chr2R 7692010 7692037 chr2R 7692092 7692119 8 82 0.5 1.5 1.0 4.0 109 chr2R 7692010 intron CG1399 - chr2R 7692064 intron CG1399 - chr2R 7692119 intron CG1399 - chr2R_8_7690001 chr2R_7690001 KN35_1-HE 847 chr2R 7725565 7725595 chr2R 7725652 7725682 19 87 4.5 8.0 6.2 2.6 117 chr2R 7725565 intron CG18812 - chr2R 7725624 intron CG18812 - chr2R 7725682 intron CG18812 - chr2R_19_7725001 chr2R_7725001 KN35_1-HE 848 chr2R 7738393 7738431 chr2R 7738480 7738518 20 87 4.0 5.5 4.8 3.4 125 chr2R 7738393 intergenic not near genes chr2R 7738456 intergenic not near genes chr2R 7738518 intergenic not near genes chr2R_20_7735001 chr2R_7735001 KN35_1-HE 849 chr2R 7769736 7769768 chr2R 7769814 7769846 13 78 7.5 4.0 5.8 1.9 110 chr2R 7769736 intron,intron CG30497 -,CG45093 - chr2R 7769791 intron,intron CG30497 -,CG45093 - chr2R 7769846 intron,intron CG30497 -,CG45093 - chr2R_13_7765001 chr2R_7765001 KN35_1-HE 850 chr2R 7815675 7815702 chr2R 7822145 7822172 Burdock 5 6470 2.0 4.0 3.0 1.2 6497 chr2R 7815675 intergenic CG1882 + chr2R 7818924 intergenic not near genes chr2R 7822172 3` UTR cathD - chr2R_5_7815001 chr2R_7815001 KN35_1-HE 851 chr2R 7842191 7842226 chr2R 7842280 7842315 17 89 5.5 3.0 4.2 3.3 124 chr2R 7842191 intron Dgk - chr2R 7842253 intron Dgk - chr2R 7842315 intron Dgk - chr2R_17_7840001 chr2R_7840001 KN35_1-HE 852 chr2R 7869191 7869206 chr2R 7873978 7873993 Doc 9 4787 7.0 4.5 5.8 1.3 4802 chr2R 7869191 intron Dgk - chr2R 7871592 intron Dgk - chr2R 7873993 intron Dgk - chr2R_9_7870001 chr2R_7870001 KN35_1-HE 853 chr2R 7956085 7956116 chr2R 7956162 7956193 12 77 2.5 5.0 3.8 2.5 108 chr2R 7956085 intergenic CG2906 +,CG14764 - chr2R 7956139 intergenic CG2906 +,CG14764 - chr2R 7956193 5` UTR CG2906 + chr2R_12_7955001 chr2R_7955001 KN35_1-HE 854 chr2R 7997016 7997043 chr2R 7997105 7997132 13 89 2.0 2.0 2.0 4.3 116 chr2R 7997016 intron Hey - chr2R 7997074 intron Hey - chr2R 7997132 intron Hey - chr2R_13_7995001 chr2R_7995001 KN35_1-HE 855 chr2R 7999577 7999595 chr2R 7999666 7999684 4 89 5.0 4.5 4.8 0.7 107 chr2R 7999577 intergenic not near genes chr2R 7999630 intergenic not near genes chr2R 7999684 intergenic not near genes chr2R_4_7995001 chr2R_7995001 KN35_1-HE 856 chr2R 8015648 8015681 chr2R 8017672 8017705 18 2022 2.0 5.5 3.8 3.8 2057 chr2R 8015648 intergenic mir-4981 + chr2R 8016676 intergenic not near genes chr2R 8017705 intergenic not near genes chr2R_18_8015001 chr2R_8015001 KN35_1-HE 857 chr2R 8026813 8026834 chr2R 8026890 8026911 4 77 4.5 3.0 3.8 0.8 98 chr2R 8026813 intergenic CR45267 + chr2R 8026862 intergenic CR45267 + chr2R 8026911 intergenic CR45267 + chr2R_4_8025001 chr2R_8025001 KN35_1-HE 858 chr2R 8114030 8114059 chr2R 8114120 8114149 12 90 0.5 2.0 1.2 5.5 119 chr2R 8114030 intergenic Asap - chr2R 8114090 intergenic Asap - chr2R 8114149 intergenic Asap - chr2R_12_8110001 chr2R_8110001 KN35_1-HE 859 chr2R 8155578 8155612 chr2R 8155668 8155702 20 90 2.0 5.0 3.5 4.4 124 chr2R 8155578 intron,intron Lpin -,kermit - chr2R 8155640 intron,intron Lpin -,kermit - chr2R 8155702 intron,intron Lpin -,kermit - chr2R_20_8155001 chr2R_8155001 KN35_1-HE 860 chr2R 8188207 8188228 chr2R 8188303 8188324 10 96 9.5 7.0 8.2 1.1 117 chr2R 8188207 intron LRP1 + chr2R 8188266 intron LRP1 + chr2R 8188324 intron LRP1 + chr2R_10_8185001 chr2R_8185001 KN35_1-HE 861 chr2R 8204491 8204507 chr2R 8204686 8204702 8 195 1.5 1.5 1.5 3.2 211 chr2R 8204491 intron LRP1 + chr2R 8204596 intron LRP1 + chr2R 8204702 intron LRP1 + chr2R_8_8200001 chr2R_8200001 KN35_1-HE 862 chr2R 8209604 8209624 chr2R 8209682 8209699 8 77 3.0 4.5 3.8 1.7 95 chr2R 8209604 exon LRP1 + chr2R 8209652 intron LRP1 + chr2R 8209699 intron LRP1 + chr2R_8_8205001 chr2R_8205001 KN35_1-HE 863 chr2R 8236037 8236064 chr2R 8236119 8236145 6 82 2.5 3.5 3.0 1.5 108 chr2R 8236037 intergenic not near genes chr2R 8236091 intergenic not near genes chr2R 8236145 intergenic not near genes chr2R_6_8235001 chr2R_8235001 KN35_1-HE 864 chr2R 8338640 8338668 chr2R 8338723 8338751 12 83 4.5 3.0 3.8 2.5 111 chr2R 8338640 intron pdm3 + chr2R 8338696 intron pdm3 + chr2R 8338751 intron pdm3 + chr2R_12_8335001 chr2R_8335001 KN35_1-HE 865 chr2R 8351107 8351128 chr2R 8351193 8351215 5 87 4.0 2.0 3.0 1.2 108 chr2R 8351107 intron pdm3 + chr2R 8351161 intron pdm3 + chr2R 8351215 intron pdm3 + chr2R_5_8350001 chr2R_8350001 KN35_1-HE 866 chr2R 8398208 8398239 chr2R 8402990 8403021 Doc 10 4781 4.5 3.5 4.0 2.0 4813 chr2R 8398208 intron CG2121 - chr2R 8400614 intron CG2121 - chr2R 8403021 intron CG2121 - chr2R_10_8400001 chr2R_8400001 KN35_1-HE 867 chr2R 8403439 8403454 chr2R 8403523 8403538 7 84 7.0 2.0 4.5 1.3 99 chr2R 8403439 intron CG2121 - chr2R 8403488 intron CG2121 - chr2R 8403538 intron CG2121 - chr2R_7_8400001 chr2R_8400001 KN35_1-HE 868 chr2R 8414365 8414394 chr2R 8414480 8414509 9 115 2.0 1.5 1.8 3.2 144 chr2R 8414365 intergenic not near genes chr2R 8414437 intergenic not near genes chr2R 8414509 intergenic not near genes chr2R_9_8410001 chr2R_8410001 KN35_1-HE 869 chr2R 8483961 8483993 chr2R 8484038 8484070 15 77 3.5 6.0 4.8 2.6 109 chr2R 8483961 intron mtt - chr2R 8484016 intron mtt - chr2R 8484070 intron mtt - chr2R_15_8480001 chr2R_8480001 KN35_1-HE 870 chr2R 8515374 8515409 chr2R 8515452 8515487 21 78 5.0 7.5 6.2 2.9 113 chr2R 8515374 intron mtt - chr2R 8515430 intron mtt - chr2R 8515487 intron mtt - chr2R_21_8515001 chr2R_8515001 KN35_1-HE 871 chr2R 8566032 8566063 chr2R 8566985 8567016 1360 10 953 2.0 9.5 5.8 1.5 984 chr2R 8566032 5` UTR Cyp6a14 - chr2R 8566524 5` UTR Cyp6a14 - chr2R 8567016 5` UTR Cyp6a14 - chr2R_10_8565001 chr2R_8565001 KN35_1-HE 872 chr2R 8569755 8569789 chr2R 8569865 8569899 12 110 1.0 3.0 2.0 4.0 144 chr2R 8569755 intergenic not near genes chr2R 8569827 intergenic not near genes chr2R 8569899 intergenic not near genes chr2R_12_8565001 chr2R_8565001 KN35_1-HE 873 chr2R 8635908 8635929 chr2R 8635987 8636008 4 79 0.0 2.0 1.0 2.0 100 chr2R 8635908 intergenic not near genes chr2R 8635958 intergenic not near genes chr2R 8636008 intergenic not near genes chr2R_4_8635001 chr2R_8635001 KN35_1-HE 874 chr2R 8714705 8714721 chr2R 8714792 8714809 11 88 0.0 13.5 6.8 1.4 104 chr2R 8714705 3` UTR PGRP-SC1b + chr2R 8714757 3` UTR PGRP-SC1b + chr2R 8714809 3` UTR PGRP-SC1b + chr2R_11_8710001 chr2R_8710001 KN35_1-HE 875 chr2R 8722762 8722794 chr2R 8723004 8723036 pogo 18 242 6.5 6.0 6.2 2.5 274 chr2R 8722762 intron CG14767 - chr2R 8722899 intron CG14767 - chr2R 8723036 intron CG14767 - chr2R_18_8720001 chr2R_8720001 KN35_1-HE 876 chr2R 8775826 8775839 chr2R 8775913 8775926 7 87 9.0 2.5 5.8 1.0 100 chr2R 8775826 intergenic not near genes chr2R 8775876 intergenic not near genes chr2R 8775926 intergenic not near genes chr2R_7_8775001 chr2R_8775001 KN35_1-HE 877 chr2R 8777932 8777944 chr2R 8784124 8784136 diver 4 6192 0.0 12.5 6.2 0.6 6204 chr2R 8777932 intergenic not near genes chr2R 8781034 intergenic not near genes chr2R 8784136 intergenic not near genes chr2R_4_8780001 chr2R_8780001 KN35_1-HE 878 chr2R 8807549 8807577 chr2R 8808267 8808295 7 718 32.0 20.0 26.0 0.3 746 chr2R 8807549 intron sns + chr2R 8807922 intron sns + chr2R 8808295 intron sns + chr2R_7_8805001 chr2R_8805001 KN35_1-HE 879 chr2R 8813998 8814018 chr2R 8814074 8814100 6 81 8.5 4.0 6.2 0.8 102 chr2R 8813998 intron sns + chr2R 8814049 intron sns + chr2R 8814100 intron sns + chr2R_6_8810001 chr2R_8810001 KN35_1-HE 880 chr2R 8833424 8833449 chr2R 8833507 8833532 18 83 6.5 0.5 3.5 4.0 108 chr2R 8833424 intron sns + chr2R 8833478 intron sns + chr2R 8833532 intron sns + chr2R_18_8830001 chr2R_8830001 KN35_1-HE 881 chr2R 8967421 8967454 chr2R 8967569 8967602 6 148 0.0 1.0 0.5 4.0 181 chr2R 8967421 intron CG8216 - chr2R 8967512 intron CG8216 - chr2R 8967602 intron CG8216 - chr2R_6_8965001 chr2R_8965001 KN35_1-HE 882 chr2R 8983661 8983694 chr2R 8983743 8983776 10 82 3.5 2.5 3.0 2.5 115 chr2R 8983661 intron CG8213 - chr2R 8983718 intron CG8213 - chr2R 8983776 intron CG8213 - chr2R_10_8980001 chr2R_8980001 KN35_1-HE 883 chr2R 9047420 9047438 chr2R 9047516 9047534 19 96 7.0 6.5 6.8 2.4 114 chr2R 9047420 intron CG13743 - chr2R 9047477 intron CG13743 - chr2R 9047534 intron CG13743 - chr2R_19_9045001 chr2R_9045001 KN35_1-HE 884 chr2R 9052702 9052738 chr2R 9052784 9052820 29 82 6.5 5.5 6.0 4.1 118 chr2R 9052702 intron CG13743 - chr2R 9052761 intron CG13743 - chr2R 9052820 intron CG13743 - chr2R_29_9050001 chr2R_9050001 KN35_1-HE 885 chr2R 9059911 9059937 chr2R 9059994 9060020 17 82 9.0 2.5 5.8 2.5 109 chr2R 9059911 intron CG13743 - chr2R 9059966 intron CG13743 - chr2R 9060020 intron CG13743 - chr2R_17_9055001 chr2R_9055001 KN35_1-HE 886 chr2R 9059938 9059947 chr2R 9059993 9060030 10 76 7.5 2.5 5.0 1.7 92 chr2R 9059938 intron CG13743 - chr2R 9059984 intron CG13743 - chr2R 9060030 intron CG13743 - chr2R_10_9055001 chr2R_9055001 KN35_1-HE 887 chr2R 9070548 9070575 chr2R 9070629 9070656 7 81 2.5 3.0 2.8 1.8 108 chr2R 9070548 intron ana + chr2R 9070602 intron ana + chr2R 9070656 intron ana + chr2R_7_9070001 chr2R_9070001 KN35_1-HE 888 chr2R 9122748 9122775 chr2R 9123181 9123208 7 433 3.0 1.0 2.0 2.3 460 chr2R 9122748 exon GstE13 + chr2R 9122978 exon GstE13 + chr2R 9123208 3` UTR GstE13 + chr2R_7_9120001 chr2R_9120001 KN35_1-HE 889 chr2R 9151299 9151330 chr2R 9157770 9157801 Burdock 13 6471 3.5 3.5 3.5 2.9 6502 chr2R 9151299 exon CG30345 + chr2R 9154550 intergenic not near genes chr2R 9157801 intergenic CG8008 - chr2R_13_9150001 chr2R_9150001 KN35_1-HE 890 chr2R 9197489 9197520 chr2R 9197577 9197592 10 86 1.5 3.0 2.2 3.1 103 chr2R 9197489 intron unpg + chr2R 9197540 intron unpg + chr2R 9197592 intron unpg + chr2R_10_9195001 chr2R_9195001 KN35_1-HE 891 chr2R 9203074 9203085 chr2R 9203153 9203164 4 79 5.0 3.0 4.0 0.8 90 chr2R 9203074 intergenic not near genes chr2R 9203119 intergenic not near genes chr2R 9203164 intergenic not near genes chr2R_4_9200001 chr2R_9200001 KN35_1-HE 892 chr2R 9212694 9212718 chr2R 9213181 9213205 roo 16 487 6.0 10.5 8.2 1.7 511 chr2R 9212694 intergenic CR45309 + chr2R 9212950 intergenic CR45309 + chr2R 9213205 5` UTR CR45309 + chr2R_16_9210001 chr2R_9210001 KN35_1-HE 893 chr2R 9224423 9224454 chr2R 9224506 9224537 5 83 1.5 2.5 2.0 1.7 114 chr2R 9224423 intergenic not near genes chr2R 9224480 intergenic not near genes chr2R 9224537 intergenic not near genes chr2R_5_9220001 chr2R_9220001 KN35_1-HE 894 chr2R 9231983 9232006 chr2R 9232119 9232142 15 136 5.5 12.0 8.8 1.5 159 chr2R 9231983 intron hig - chr2R 9232062 intron hig - chr2R 9232142 intron hig - chr2R_15_9230001 chr2R_9230001 KN35_1-HE 895 chr2R 9267974 9268013 chr2R 9268061 9268100 23 87 3.5 3.0 3.2 5.5 126 chr2R 9267974 exon Pkn - chr2R 9268037 intron Pkn - chr2R 9268100 intron Pkn - chr2R_23_9265001 chr2R_9265001 KN35_1-HE 896 chr2R 9346071 9346094 chr2R 9346212 9346235 12 141 4.0 6.0 5.0 2.0 164 chr2R 9346071 intron,intron,exon CG13739 -,CG13954 -,Or45a + chr2R 9346153 intron,intron,exon CG13739 -,CG13954 -,Or45a + chr2R 9346235 intron,intron,exon CG13739 -,CG13954 -,Or45a + chr2R_12_9345001 chr2R_9345001 KN35_1-HE 897 chr2R 9352252 9352257 chr2R 9361403 9361408 roo 8 9151 4.0 13.0 8.5 0.8 9156 chr2R 9352252 intron CG13954 - chr2R 9356830 intron CG13954 - chr2R 9361408 intron CG13954 - chr2R_8_9355001 chr2R_9355001 KN35_1-HE 898 chr2R 9368124 9368152 chr2R 9368201 9368229 14 77 3.5 0.0 1.8 5.0 105 chr2R 9368124 intron CG13954 - chr2R 9368176 intron CG13954 - chr2R 9368229 intron CG13954 - chr2R_14_9365001 chr2R_9365001 KN35_1-HE 899 chr2R 9480074 9480110 chr2R 9490606 9490642 roo 25 10532 6.5 2.5 4.5 4.5 10568 chr2R 9480074 intergenic not near genes chr2R 9485358 intergenic not near genes chr2R 9490642 intergenic not near genes chr2R_25_9485001 chr2R_9485001 KN35_1-HE 900 chr2R 9509433 9509453 chr2R 9509519 9509532 15 85 5.0 19.0 12.0 1.2 99 chr2R 9509433 intron brp + chr2R 9509482 intron brp + chr2R 9509532 intron brp + chr2R_15_9505001 chr2R_9505001 KN35_1-HE 901 chr2R 9565841 9565870 chr2R 9565927 9565955 5 82 3.5 2.0 2.8 1.3 114 chr2R 9565841 intergenic Not1 - chr2R 9565898 intergenic Not1 - chr2R 9565955 intergenic Not1 - chr2R_5_9565001 chr2R_9565001 KN35_1-HE 902 chr2R 9617777 9617811 chr2R 9618036 9618070 10 259 2.5 4.0 3.2 2.4 293 chr2R 9617777 intron Mmp2 - chr2R 9617924 intron Mmp2 - chr2R 9618070 intron Mmp2 - chr2R_10_9615001 chr2R_9615001 KN35_1-HE 903 chr2R 9655485 9655493 chr2R 9655563 9655580 4 85 0.0 8.5 4.2 0.8 95 chr2R 9655485 intron Mmp2 - chr2R 9655532 intron Mmp2 - chr2R 9655580 intron Mmp2 - chr2R_4_9655001 chr2R_9655001 KN35_1-HE 904 chr2R 9726609 9726644 chr2R 9734161 9734196 17.6 26 7552 5.5 6.5 6.0 3.7 7587 chr2R 9726609 intron sqa - chr2R 9730402 intron sqa - chr2R 9734196 intron sqa - chr2R_26_9730001 chr2R_9730001 KN35_1-HE 905 chr2R 9741789 9741804 chr2R 9741883 9741898 12 94 10.0 15.0 12.5 0.9 109 chr2R 9741789 intron sqa - chr2R 9741844 intron sqa - chr2R 9741898 intron sqa - chr2R_12_9740001 chr2R_9740001 KN35_1-HE 906 chr2R 9758639 9758666 chr2R 9759441 9759468 8 802 2.5 4.0 3.2 1.9 829 chr2R 9758639 intron trpl + chr2R 9759054 intron trpl + chr2R 9759468 intron trpl + chr2R_8_9755001 chr2R_9755001 KN35_1-HE 907 chr2R 9783993 9784139 chr2R 9784077 9784231 16 87 7.0 8.0 7.5 1.9 238 chr2R 9783993 intron CG1688 - chr2R 9784112 intron CG1688 - chr2R 9784231 intron CG1688 - chr2R_16_9780001 chr2R_9780001 KN35_1-HE 908 chr2R 9789093 9789123 chr2R 9789184 9789214 12 91 8.5 2.0 5.2 1.9 121 chr2R 9789093 intron,5` UTR CG1688 -,CR44208 + chr2R 9789154 intron,5` UTR CG1688 -,CR44208 + chr2R 9789214 intron,5` UTR CG1688 -,CR44208 + chr2R_12_9785001 chr2R_9785001 KN35_1-HE 909 chr2R 9817433 9817453 chr2R 9817513 9817533 10 80 2.5 8.0 5.2 1.6 100 chr2R 9817433 intron,exon CG1648 -,lectin-46Ca + chr2R 9817483 intron,intron CG1648 -,lectin-46Ca + chr2R 9817533 intron,intron CG1648 -,lectin-46Ca + chr2R_10_9815001 chr2R_9815001 KN35_1-HE 910 chr2R 9871038 9871074 chr2R 9871525 9871561 roo 10 487 2.0 5.0 3.5 2.2 523 chr2R 9871038 intron cbx - chr2R 9871300 intron cbx - chr2R 9871561 intron,5` UTR cbx -,CG18446 + chr2R_10_9870001 chr2R_9870001 KN35_1-HE 911 chr2R 7071618 7071623 chr2R 9941238 9941244 5 2869620 15.5 27.0 21.2 0.2 2869626 chr2R 7071618 3` UTR CG12831 - chr2R 8506431 intron mtt - chr2R 9941244 intron Mef2 - chr2R_5_8505001 chr2R_8505001 KN35_1-HE 912 chr2R 9945433 9945470 chr2R 9945630 9945667 BS 17 197 4.5 5.0 4.8 2.9 234 chr2R 9945433 intron Mef2 - chr2R 9945550 intron Mef2 - chr2R 9945667 intron Mef2 - chr2R_17_9945001 chr2R_9945001 KN35_1-HE 913 chr2R 9980404 9980415 chr2R 9980509 9980520 4 105 2.0 3.0 2.5 1.1 116 chr2R 9980404 exon eve + chr2R 9980462 exon eve + chr2R 9980520 exon eve + chr2R_4_9980001 chr2R_9980001 KN35_1-HE 914 chr2R 9984458 9984486 chr2R 9984581 9984609 15 123 2.5 6.0 4.2 2.9 151 chr2R 9984458 intergenic not near genes chr2R 9984534 intergenic not near genes chr2R 9984609 intergenic not near genes chr2R_15_9980001 chr2R_9980001 KN35_1-HE 915 chr2R 10005614 10005638 chr2R 10005697 10005721 4 83 3.0 2.0 2.5 1.1 107 chr2R 10005614 intron Pka-R2 - chr2R 10005668 intron Pka-R2 - chr2R 10005721 intron Pka-R2 - chr2R_4_10005001 chr2R_10005001 KN35_1-HE 916 chr2R 10005847 10005879 chr2R 10007013 10007045 1360 12 1166 5.5 5.0 5.2 1.9 1198 chr2R 10005847 intron Pka-R2 - chr2R 10006446 intron Pka-R2 - chr2R 10007045 intron Pka-R2 - chr2R_12_10005001 chr2R_10005001 KN35_1-HE 917 chr2R 10044244 10044257 chr2R 10044413 10044426 4 169 1.0 5.0 3.0 1.0 182 chr2R 10044244 intron,5` UTR oys -,CR44295 + chr2R 10044335 intron,5` UTR oys -,CR44295 + chr2R 10044426 intron,5` UTR oys -,CR44295 + chr2R_4_10040001 chr2R_10040001 KN35_1-HE 918 chr2R 10047824 10047841 chr2R 10047908 10047925 5 84 5.5 7.0 6.2 0.7 101 chr2R 10047824 intron oys - chr2R 10047874 intron oys - chr2R 10047925 intron oys - chr2R_5_10045001 chr2R_10045001 KN35_1-HE 919 chr2R 10091237 10091267 chr2R 10091324 10091354 11 87 4.0 7.0 5.5 1.7 117 chr2R 10091237 intron CG2269 + chr2R 10091296 intron CG2269 + chr2R 10091354 intron CG2269 + chr2R_11_10090001 chr2R_10090001 KN35_1-HE 920 chr2R 10160539 10160574 chr2R 10160628 10160663 24 89 3.5 9.5 6.5 3.2 124 chr2R 10160539 intron KCNQ - chr2R 10160601 intron KCNQ - chr2R 10160663 intron KCNQ - chr2R_24_10160001 chr2R_10160001 KN35_1-HE 921 chr2R 10176900 10176913 chr2R 10186068 10186081 roo 7 9168 8.0 4.5 6.2 1.0 9181 chr2R 10176900 intron KCNQ - chr2R 10181490 intron KCNQ - chr2R 10186081 intron KCNQ - chr2R_7_10180001 chr2R_10180001 KN35_1-HE 922 chr2R 10203640 10203661 chr2R 10203726 10203747 5 86 4.0 3.5 3.8 1.0 107 chr2R 10203640 intergenic not near genes chr2R 10203694 intergenic not near genes chr2R 10203747 intergenic not near genes chr2R_5_10200001 chr2R_10200001 KN35_1-HE 923 chr2R 10216194 10216224 chr2R 10216273 10216303 21 79 4.0 5.5 4.8 3.6 109 chr2R 10216194 intron,intron CG12912 -,Hr46 - chr2R 10216248 intron,intron CG12912 -,Hr46 - chr2R 10216303 intron,intron CG12912 -,Hr46 - chr2R_21_10215001 chr2R_10215001 KN35_1-HE 924 chr2R 10225736 10225752 chr2R 10225819 10225835 7 83 1.5 4.0 2.8 1.8 99 chr2R 10225736 intron,intron CG12912 -,Hr46 - chr2R 10225786 intron,intron CG12912 -,Hr46 - chr2R 10225835 intron,intron CG12912 -,Hr46 - chr2R_7_10225001 chr2R_10225001 KN35_1-HE 925 chr2R 10238818 10238854 chr2R 10240045 10240081 22 1227 53.0 32.0 42.5 0.5 1263 chr2R 10238818 intron Hdc + chr2R 10239450 intron Hdc + chr2R 10240081 intron Hdc + chr2R_22_10235001 chr2R_10235001 KN35_1-HE 926 chr2R 10266493 10266520 chr2R 10266585 10266612 12 91 3.5 2.0 2.8 3.2 119 chr2R 10266493 intron CG12910 + chr2R 10266552 intron CG12910 + chr2R 10266612 intron CG12910 + chr2R_12_10265001 chr2R_10265001 KN35_1-HE 927 chr2R 10313306 10313338 chr2R 10313401 10313433 10 95 1.5 2.0 1.8 3.6 127 chr2R 10313306 intergenic not near genes chr2R 10313370 intergenic not near genes chr2R 10313433 intergenic Ndg + chr2R_10_10310001 chr2R_10310001 KN35_1-HE 928 chr2R 10376137 10376167 chr2R 10376487 10376517 11 350 1.0 1.5 1.2 5.0 380 chr2R 10376137 intron CG42732 - chr2R 10376327 intron CG42732 - chr2R 10376517 intron CG42732 - chr2R_11_10375001 chr2R_10375001 KN35_1-HE 929 chr2R 10441593 10441609 chr2R 10441670 10441690 4 78 9.0 0.5 4.8 0.7 97 chr2R 10441593 intron Galphao + chr2R 10441642 intron Galphao + chr2R 10441690 intron Galphao + chr2R_4_10440001 chr2R_10440001 KN35_1-HE 930 chr2R 10469035 10469055 chr2R 10469162 10469182 8 127 1.0 3.0 2.0 2.7 147 chr2R 10469035 intron CG11777 + chr2R 10469108 intron CG11777 + chr2R 10469182 intron CG11777 + chr2R_8_10465001 chr2R_10465001 KN35_1-HE 931 chr2R 10543556 10543578 chr2R 10543832 10543854 13 276 6.5 9.0 7.8 1.5 298 chr2R 10543556 intergenic lola - chr2R 10543705 intergenic lola - chr2R 10543854 intergenic not near genes chr2R_13_10540001 chr2R_10540001 KN35_1-HE 932 chr2R 10548127 10548136 chr2R 10548206 10548215 5 79 5.5 15.0 10.2 0.4 88 chr2R 10548127 intergenic not near genes chr2R 10548171 intergenic not near genes chr2R 10548215 intergenic not near genes chr2R_5_10545001 chr2R_10545001 KN35_1-HE 933 chr2R 10562981 10563014 chr2R 10563060 10563093 7 79 1.5 1.5 1.5 2.8 112 chr2R 10562981 intron psq + chr2R 10563037 intron psq + chr2R 10563093 intron psq + chr2R_7_10560001 chr2R_10560001 KN35_1-HE 934 chr2R 10563549 10563583 chr2R 10563630 10563664 16 81 5.0 8.5 6.8 2.1 115 chr2R 10563549 intron psq + chr2R 10563606 intron psq + chr2R 10563664 intron psq + chr2R_16_10560001 chr2R_10560001 KN35_1-HE 935 chr2R 10563922 10563924 chr2R 10564114 10564116 4 192 0.0 9.0 4.5 0.7 194 chr2R 10563922 intron psq + chr2R 10564019 intron psq + chr2R 10564116 intron psq + chr2R_4_10560001 chr2R_10560001 KN35_1-HE 936 chr2R 10574626 10574639 chr2R 10574709 10574722 13 83 11.0 9.0 10.0 1.2 96 chr2R 10574626 intron psq + chr2R 10574674 intron psq + chr2R 10574722 intron psq + chr2R_13_10570001 chr2R_10570001 KN35_1-HE 937 chr2R 10585581 10585590 chr2R 10594165 10594174 Tirant 5 8584 3.0 5.0 4.0 1.0 8593 chr2R 10585581 intron psq + chr2R 10589878 intron psq + chr2R 10594174 intron psq + chr2R_5_10585001 chr2R_10585001 KN35_1-HE 938 chr2R 10622352 10622358 chr2R 10637117 10637123 mdg1 4 14765 10.0 1.0 5.5 0.6 14771 chr2R 10622352 intron CG11883 + chr2R 10629738 intron CG11883 + chr2R 10637123 intron CG11883 + chr2R_4_10625001 chr2R_10625001 KN35_1-HE 939 chr2R 10644061 10644088 chr2R 10644140 10644167 12 79 3.5 0.0 1.8 4.3 106 chr2R 10644061 intron Git - chr2R 10644114 intron Git - chr2R 10644167 intron Git - chr2R_12_10640001 chr2R_10640001 KN35_1-HE 940 chr2R 10697305 10697339 chr2R 10697392 10697426 22 87 8.0 3.5 5.8 3.2 121 chr2R 10697305 intron stan + chr2R 10697366 intron stan + chr2R 10697426 intron stan + chr2R_22_10695001 chr2R_10695001 KN35_1-HE 941 chr2R 10761558 10761589 chr2R 10761713 10761744 15 155 4.5 2.0 3.2 3.6 186 chr2R 10761558 intron,5` UTR CG33144 -,CR43605 + chr2R 10761651 intron,5` UTR CG33144 -,CR43605 + chr2R 10761744 intron CG33144 - chr2R_15_10760001 chr2R_10760001 KN35_1-HE 942 chr2R 10765573 10765607 chr2R 10765728 10765762 11 155 2.0 2.5 2.2 3.4 189 chr2R 10765573 intron CG33144 - chr2R 10765668 intron CG33144 - chr2R 10765762 intron CG33144 - chr2R_11_10765001 chr2R_10765001 KN35_1-HE 943 chr2R 10770998 10771027 chr2R 10771080 10771109 5 82 2.0 3.5 2.8 1.3 111 chr2R 10770998 intron CG33144 - chr2R 10771054 intron CG33144 - chr2R 10771109 intron CG33144 - chr2R_5_10770001 chr2R_10770001 KN35_1-HE 944 chr2R 10804208 10804242 chr2R 10804288 10804323 12 81 7.5 2.0 4.8 2.1 115 chr2R 10804208 exon wde - chr2R 10804266 exon wde - chr2R 10804323 exon wde - chr2R_12_10800001 chr2R_10800001 KN35_1-HE 945 chr2R 10844546 10844573 chr2R 10844631 10844658 15 85 0.0 5.0 2.5 4.3 112 chr2R 10844546 intron CG30015 - chr2R 10844602 intron CG30015 - chr2R 10844658 intron CG30015 - chr2R_15_10840001 chr2R_10840001 KN35_1-HE 946 chr2R 10860484 10860520 chr2R 10860567 10860603 34 83 3.5 6.0 4.8 5.9 119 chr2R 10860484 intron CG30015 - chr2R 10860544 intron CG30015 - chr2R 10860603 intron CG30015 - chr2R_34_10860001 chr2R_10860001 KN35_1-HE 947 chr2R 10871650 10871672 chr2R 10871730 10871757 4 82 0.5 7.0 3.8 0.8 107 chr2R 10871650 intron CG30015 - chr2R 10871704 intron CG30015 - chr2R 10871757 intron CG30015 - chr2R_4_10870001 chr2R_10870001 KN35_1-HE 948 chr2R 10873353 10873369 chr2R 10873441 10873457 6 88 4.5 2.5 3.5 1.3 104 chr2R 10873353 intron CG30015 - chr2R 10873405 intron CG30015 - chr2R 10873457 intron CG30015 - chr2R_6_10870001 chr2R_10870001 KN35_1-HE 949 chr2R 10875634 10875650 chr2R 10875733 10875749 1360 9 99 7.0 1.0 4.0 1.8 115 chr2R 10875634 intergenic nclb +,CG30016 - chr2R 10875692 intergenic nclb +,CG30016 - chr2R 10875749 5` UTR nclb + chr2R_9_10875001 chr2R_10875001 KN35_1-HE 950 chr2R 10922778 10922790 chr2R 10922865 10922877 7 87 0.0 9.5 4.8 1.2 99 chr2R 10922778 intergenic not near genes chr2R 10922828 intergenic not near genes chr2R 10922877 intergenic not near genes chr2R_7_10920001 chr2R_10920001 KN35_1-HE 951 chr2R 10948022 10948061 chr2R 10955574 10955613 17.6 15 7552 0.0 3.0 1.5 6.0 7591 chr2R 10948022 intergenic not near genes chr2R 10951818 intergenic not near genes chr2R 10955613 intergenic not near genes chr2R_15_10950001 chr2R_10950001 KN35_1-HE 952 chr2R 10959090 10959112 chr2R 10959170 10959192 8 80 3.5 5.0 4.2 1.5 102 chr2R 10959090 intergenic not near genes chr2R 10959141 intergenic not near genes chr2R 10959192 intergenic not near genes chr2R_8_10955001 chr2R_10955001 KN35_1-HE 953 chr2R 10966824 10966850 chr2R 10966915 10966941 12 91 2.0 3.0 2.5 3.4 117 chr2R 10966824 intergenic not near genes chr2R 10966882 intergenic not near genes chr2R 10966941 intergenic not near genes chr2R_12_10965001 chr2R_10965001 KN35_1-HE 954 chr2R 10976354 10976373 chr2R 10976438 10976457 12 84 4.0 3.0 3.5 2.7 103 chr2R 10976354 intergenic not near genes chr2R 10976406 intergenic not near genes chr2R 10976457 intergenic not near genes chr2R_12_10975001 chr2R_10975001 KN35_1-HE 955 chr2R 10979670 10979678 chr2R 10980141 10980149 297 5 471 4.0 5.0 4.5 0.9 479 chr2R 10979670 intergenic not near genes chr2R 10979910 intergenic not near genes chr2R 10980149 intergenic not near genes chr2R_5_10975001 chr2R_10975001 KN35_1-HE 956 chr2R 11009813 11009847 chr2R 11018988 11019022 roo 10 9175 3.5 5.0 4.2 1.9 9209 chr2R 11009813 intron luna - chr2R 11014418 intron luna - chr2R 11019022 intron luna - chr2R_10_11010001 chr2R_11010001 KN35_1-HE 957 chr2R 11019878 11019909 chr2R 11024945 11024976 jockey 9 5066 4.5 5.0 4.8 1.6 5098 chr2R 11019878 intron luna - chr2R 11022427 intron luna - chr2R 11024976 intron luna - chr2R_9_11020001 chr2R_11020001 KN35_1-HE 958 chr2R 11102864 11102890 chr2R 11102947 11102973 10 83 8.5 0.0 4.2 1.9 109 chr2R 11102864 intron luna - chr2R 11102918 intron luna - chr2R 11102973 intron luna - chr2R_10_11100001 chr2R_11100001 KN35_1-HE 959 chr2R 11116853 11116870 chr2R 11116931 11116948 8 77 4.5 8.0 6.2 1.1 95 chr2R 11116853 intergenic Cyp12d1-p -,luna - chr2R 11116900 intergenic Cyp12d1-p - chr2R 11116948 intergenic Cyp12d1-p - chr2R_8_11115001 chr2R_11115001 KN35_1-HE 960 chr2R 11129066 11129101 chr2R 11129156 11129191 15 89 3.5 5.0 4.2 2.9 125 chr2R 11129066 intergenic not near genes chr2R 11129128 intergenic not near genes chr2R 11129191 intergenic not near genes chr2R_15_11125001 chr2R_11125001 KN35_1-HE 961 chr2R 11154210 11154223 chr2R 11154325 11154338 5 115 3.0 3.5 3.2 1.2 128 chr2R 11154210 intron CG13229 - chr2R 11154274 intron CG13229 - chr2R 11154338 intron CG13229 - chr2R_5_11150001 chr2R_11150001 KN35_1-HE 962 chr2R 11163152 11163178 chr2R 11163241 11163267 8 89 2.0 3.0 2.5 2.3 115 chr2R 11163152 intron,intron CG13229 -,shn + chr2R 11163210 intron,intron CG13229 -,shn + chr2R 11163267 intron,intron CG13229 -,shn + chr2R_8_11160001 chr2R_11160001 KN35_1-HE 963 chr2R 11179266 11179289 chr2R 11179353 11179376 16 87 1.0 15.0 8.0 1.8 110 chr2R 11179266 intron shn + chr2R 11179321 intron shn + chr2R 11179376 intron shn + chr2R_16_11175001 chr2R_11175001 KN35_1-HE 964 chr2R 11183253 11183263 chr2R 11183336 11183346 8 83 5.0 10.0 7.5 0.9 93 chr2R 11183253 intron shn + chr2R 11183300 intron shn + chr2R 11183346 intron shn + chr2R_8_11180001 chr2R_11180001 KN35_1-HE 965 chr2R 11201144 11201172 chr2R 11201246 11201274 21 102 7.0 5.0 6.0 3.0 130 chr2R 11201144 intron shn + chr2R 11201209 intron shn + chr2R 11201274 intron shn + chr2R_21_11200001 chr2R_11200001 KN35_1-HE 966 chr2R 11207812 11207853 chr2R 11208006 11208043 BS 14 193 15.5 0.0 7.8 1.6 231 chr2R 11207812 intron shn + chr2R 11207928 intron shn + chr2R 11208043 intron shn + chr2R_14_11205001 chr2R_11205001 KN35_1-HE 967 chr2R 11249170 11249184 chr2R 11249297 11249311 12 127 6.5 0.0 3.2 2.9 141 chr2R 11249170 intergenic CG43112 + chr2R 11249240 intergenic CG43112 + chr2R 11249311 intergenic CG43112 + chr2R_12_11245001 chr2R_11245001 KN35_1-HE 968 chr2R 11265726 11265758 chr2R 11265809 11265841 5 83 2.5 1.5 2.0 1.7 115 chr2R 11265726 exon Cpr47Ee + chr2R 11265784 intron Cpr47Ee + chr2R 11265841 intron Cpr47Ee + chr2R_5_11265001 chr2R_11265001 KN35_1-HE 969 chr2R 11292974 11292996 chr2R 11293054 11293076 6 80 0.5 0.0 0.2 5.0 102 chr2R 11292974 exon,3` UTR dare -,CG30033 + chr2R 11293025 5` UTR,3` UTR dare -,CG30033 + chr2R 11293076 5` UTR,3` UTR dare -,CG30033 + chr2R_6_11290001 chr2R_11290001 KN35_1-HE 970 chr2R 11297639 11297649 chr2R 11301961 11301971 flea 11 4322 5.5 2.5 4.0 2.2 4332 chr2R 11297639 intergenic CG42336 - chr2R 11299805 intergenic not near genes chr2R 11301971 5` UTR CG7741 + chr2R_11_11295001 chr2R_11295001 KN35_1-HE 971 chr2R 11368038 11368057 chr2R 11368115 11368134 6 77 2.5 4.0 3.2 1.4 96 chr2R 11368038 intron CG13204 + chr2R 11368086 intron CG13204 + chr2R 11368134 intron CG13204 + chr2R_6_11365001 chr2R_11365001 KN35_1-HE 972 chr2R 11391240 11391276 chr2R 11391317 11391353 22 77 5.0 5.0 5.0 3.7 113 chr2R 11391240 intron sprt - chr2R 11391296 intron sprt - chr2R 11391353 intron sprt - chr2R_22_11390001 chr2R_11390001 KN35_1-HE 973 chr2R 11415519 11415549 chr2R 11418669 11418699 opus 18 3150 7.5 6.0 6.8 2.3 3180 chr2R 11415519 intron Drip - chr2R 11417109 intron Drip - chr2R 11418699 intron Drip - chr2R_18_11415001 chr2R_11415001 KN35_1-HE 974 chr2R 11436613 11436621 chr2R 11436720 11436728 6 107 0.0 4.5 2.2 1.9 115 chr2R 11436613 intron CG7777 + chr2R 11436670 intron CG7777 + chr2R 11436728 intron CG7777 + chr2R_6_11435001 chr2R_11435001 KN35_1-HE 975 chr2R 11472650 11472680 chr2R 11473848 11473878 pogo 9 1198 2.0 10.5 6.2 1.2 1228 chr2R 11472650 intergenic not near genes chr2R 11473264 intergenic not near genes chr2R 11473878 intergenic not near genes chr2R_9_11470001 chr2R_11470001 KN35_1-HE 976 chr2R 11530831 11530866 chr2R 11530926 11530961 18 95 3.5 5.5 4.5 3.3 130 chr2R 11530831 intergenic not near genes chr2R 11530896 intergenic not near genes chr2R 11530961 intergenic not near genes chr2R_18_11530001 chr2R_11530001 KN35_1-HE 977 chr2R 11555395 11555431 chr2R 11555731 11555767 10 336 2.0 0.0 1.0 5.0 372 chr2R 11555395 intergenic not near genes chr2R 11555581 intergenic not near genes chr2R 11555767 intergenic not near genes chr2R_10_11555001 chr2R_11555001 KN35_1-HE 978 chr2R 11572957 11572972 chr2R 11573054 11573069 6 97 3.5 0.0 1.8 2.1 112 chr2R 11572957 intergenic not near genes chr2R 11573013 intergenic not near genes chr2R 11573069 intergenic not near genes chr2R_6_11570001 chr2R_11570001 KN35_1-HE 979 chr2R 11614621 11614798 chr2R 11614710 11614887 26 89 7.0 7.0 7.0 3.2 266 chr2R 11614621 intron tou - chr2R 11614754 intron tou - chr2R 11614887 intron tou - chr2R_26_11610001 chr2R_11610001 KN35_1-HE 980 chr2R 11664241 11664276 chr2R 11664325 11664358 15 84 5.5 5.0 5.2 2.4 117 chr2R 11664241 intron Roc2 - chr2R 11664300 intron Roc2 - chr2R 11664358 intron Roc2 - chr2R_15_11660001 chr2R_11660001 KN35_1-HE 981 chr2R 11724174 11724186 chr2R 11724258 11724270 6 84 3.0 6.5 4.8 1.0 96 chr2R 11724174 intron pyr + chr2R 11724222 intron pyr + chr2R 11724270 intron pyr + chr2R_6_11720001 chr2R_11720001 KN35_1-HE 982 chr2R 11789672 11789689 chr2R 11789775 11789792 9 103 0.0 2.5 1.2 4.1 120 chr2R 11789672 intron ths + chr2R 11789732 intron ths + chr2R 11789792 intron ths + chr2R_9_11785001 chr2R_11785001 KN35_1-HE 983 chr2R 11793004 11793016 chr2R 11793090 11793102 8 86 5.0 0.0 2.5 2.3 98 chr2R 11793004 intron ths + chr2R 11793053 intron ths + chr2R 11793102 intron ths + chr2R_8_11790001 chr2R_11790001 KN35_1-HE 984 chr2R 11804480 11804516 chr2R 11804557 11804593 19 77 3.0 2.0 2.5 5.4 113 chr2R 11804480 intron ths + chr2R 11804536 intron ths + chr2R 11804593 intron ths + chr2R_19_11800001 chr2R_11800001 KN35_1-HE 985 chr2R 11822979 11823006 chr2R 11823057 11823084 8 78 0.0 2.5 1.2 3.6 105 chr2R 11822979 intergenic not near genes chr2R 11823032 intergenic not near genes chr2R 11823084 intergenic not near genes chr2R_8_11820001 chr2R_11820001 KN35_1-HE 986 chr2R 11826883 11826921 chr2R 11826996 11827034 9 113 1.0 3.0 2.0 3.0 151 chr2R 11826883 3` UTR CG13192 + chr2R 11826958 3` UTR CG13192 + chr2R 11827034 3` UTR CG13192 + chr2R_9_11825001 chr2R_11825001 KN35_1-HE 987 chr2R 11829063 11829096 chr2R 11829182 11829215 11 119 4.5 4.0 4.2 2.1 152 chr2R 11829063 exon Sobp - chr2R 11829139 intron Sobp - chr2R 11829215 intron Sobp - chr2R_11_11825001 chr2R_11825001 KN35_1-HE 988 chr2R 11928701 11928710 chr2R 11928780 11928789 8 79 0.0 10.5 5.2 1.3 88 chr2R 11928701 intergenic not near genes chr2R 11928745 intergenic CR44312 - chr2R 11928789 intergenic CR44312 - chr2R_8_11925001 chr2R_11925001 KN35_1-HE 989 chr2R 11938698 11938727 chr2R 11938783 11938812 8 85 2.0 3.0 2.5 2.3 114 chr2R 11938698 intergenic not near genes chr2R 11938755 intergenic not near genes chr2R 11938812 intergenic not near genes chr2R_8_11935001 chr2R_11935001 KN35_1-HE 990 chr2R 8518781 8518801 chr2R 12066174 12066194 9 3547393 15.0 10.0 12.5 0.7 3547413 chr2R 8518781 intron mtt - chr2R 10292488 intron CAP + chr2R 12066194 intron CG8888 - chr2R_9_10290001 chr2R_10290001 KN35_1-HE 991 chr2R 12096833 12096853 chr2R 12097286 12097306 17 453 6.5 3.5 5.0 2.8 473 chr2R 12096833 intron jeb - chr2R 12097070 intron jeb - chr2R 12097306 intron jeb - chr2R_17_12095001 chr2R_12095001 KN35_1-HE 992 chr2R 12132076 12132100 chr2R 12132568 12132592 9 492 6.5 5.0 5.8 1.3 516 chr2R 12132076 intergenic not near genes chr2R 12132334 intergenic not near genes chr2R 12132592 intergenic not near genes chr2R_9_12130001 chr2R_12130001 KN35_1-HE 993 chr2R 12185999 12186035 chr2R 12186095 12186131 19 96 5.5 6.5 6.0 2.7 132 chr2R 12185999 intron Cyp6g1 + chr2R 12186065 intron Cyp6g1 + chr2R 12186131 intron Cyp6g1 + chr2R_19_12185001 chr2R_12185001 KN35_1-HE 994 chr2R 12187471 12187509 chr2R 12190092 12190124 56 2618 96.5 50.5 73.5 0.8 2653 chr2R 12187471 exon Cyp6g1 + chr2R 12188798 exon Cyp6g2 - chr2R 12190124 exon Cyp6g2 - chr2R_56_12185001 chr2R_12185001 KN35_1-HE 995 chr2R 12217575 12217603 chr2R 12217657 12217685 12 82 3.0 6.5 4.8 2.1 110 chr2R 12217575 intergenic not near genes chr2R 12217630 intergenic not near genes chr2R 12217685 intergenic not near genes chr2R_12_12215001 chr2R_12215001 KN35_1-HE 996 chr2R 12267904 12267923 chr2R 12267984 12268003 10 80 1.0 5.0 3.0 2.5 99 chr2R 12267904 intron Cam + chr2R 12267954 intron Cam + chr2R 12268003 intron Cam + chr2R_10_12265001 chr2R_12265001 KN35_1-HE 997 chr2R 12284297 12284326 chr2R 12284382 12284411 10 83 5.0 4.0 4.5 1.8 114 chr2R 12284297 intron CG42700 + chr2R 12284354 intron CG42700 + chr2R 12284411 intron CG42700 + chr2R_10_12280001 chr2R_12280001 KN35_1-HE 998 chr2R 12285389 12285410 chr2R 12285487 12285508 7 98 3.0 0.0 1.5 2.8 119 chr2R 12285389 intron CG42700 + chr2R 12285448 intron CG42700 + chr2R 12285508 intron CG42700 + chr2R_7_12285001 chr2R_12285001 KN35_1-HE 999 chr2R 12386393 12386425 chr2R 12386480 12386512 24 87 4.5 4.5 4.5 4.4 119 chr2R 12386393 intergenic Cpr49Ac + chr2R 12386452 intergenic Cpr49Ac + chr2R 12386512 intergenic Cpr49Ac + chr2R_24_12385001 chr2R_12385001 KN35_1-HE 1000 chr2R 12452936 12452974 chr2R 12453017 12453055 22 81 3.5 8.0 5.8 3.2 119 chr2R 12452936 intergenic Dyb +,Lac + chr2R 12452996 intergenic Dyb +,Lac + chr2R 12453055 intergenic Lac +,Dyb + chr2R_22_12450001 chr2R_12450001 KN35_1-HE 1001 chr2R 12460230 12460258 chr2R 12460312 12460337 15 81 2.0 5.0 3.5 3.3 107 chr2R 12460230 intron Lac + chr2R 12460284 intron Lac + chr2R 12460337 intron Lac + chr2R_15_12460001 chr2R_12460001 KN35_1-HE 1002 chr2R 12481138 12481169 chr2R 12482941 12482955 roo 11 1802 3.0 8.5 5.8 1.6 1817 chr2R 12481138 exon Dh44-R2 + chr2R 12482046 intron Dh44-R2 + chr2R 12482955 intron Dh44-R2 + chr2R_11_12480001 chr2R_12480001 KN35_1-HE 1003 chr2R 12492096 12492124 chr2R 12492183 12492211 18 86 2.0 5.5 3.8 3.8 115 chr2R 12492096 intron fdl - chr2R 12492154 intron fdl - chr2R 12492211 intron fdl - chr2R_18_12490001 chr2R_12490001 KN35_1-HE 1004 chr2R 12493943 12493976 chr2R 12494021 12494054 11 78 4.0 6.5 5.2 1.8 111 chr2R 12493943 intron fdl - chr2R 12493998 intron fdl - chr2R 12494054 intron fdl - chr2R_11_12490001 chr2R_12490001 KN35_1-HE 1005 chr2R 12501689 12501719 chr2R 12503852 12503873 Rt1c 9 2162 6.0 5.0 5.5 1.4 2184 chr2R 12501689 intron fdl - chr2R 12502781 intron fdl - chr2R 12503873 intron fdl - chr2R_9_12500001 chr2R_12500001 KN35_1-HE 1006 chr2R 12529904 12529931 chr2R 12529998 12530025 10 94 2.5 0.0 1.2 4.5 121 chr2R 12529904 intron fra + chr2R 12529964 intron fra + chr2R 12530025 intron fra + chr2R_10_12525001 chr2R_12525001 KN35_1-HE 1007 chr2R 12648957 12648994 chr2R 12649034 12649071 10 77 2.0 0.0 1.0 5.0 114 chr2R 12648957 intergenic not near genes chr2R 12649014 intergenic not near genes chr2R 12649071 intergenic not near genes chr2R_10_12645001 chr2R_12645001 KN35_1-HE 1008 chr2R 12677397 12677406 chr2R 12677482 12677491 4 85 0.0 10.0 5.0 0.7 94 chr2R 12677397 intron CG42708 - chr2R 12677444 intron CG42708 - chr2R 12677491 intron CG42708 - chr2R_4_12675001 chr2R_12675001 KN35_1-HE 1009 chr2R 12703478 12703510 chr2R 12703597 12703629 11 119 4.0 3.5 3.8 2.3 151 chr2R 12703478 intergenic not near genes chr2R 12703554 intergenic not near genes chr2R 12703629 intergenic not near genes chr2R_11_12700001 chr2R_12700001 KN35_1-HE 1010 chr2R 12707518 12707549 chr2R 12715885 12715916 roo 14 8367 0.0 1.5 0.8 7.8 8398 chr2R 12707518 intron CG42663 + chr2R 12711717 intron CG42663 + chr2R 12715916 intron CG42663 + chr2R_14_12710001 chr2R_12710001 KN35_1-HE 1011 chr2R 12733330 12733337 chr2R 12733414 12733418 4 83 5.0 4.0 4.5 0.7 88 chr2R 12733330 intron CG42663 + chr2R 12733374 intron CG42663 + chr2R 12733418 intron CG42663 + chr2R_4_12730001 chr2R_12730001 KN35_1-HE 1012 chr2R 12736070 12736082 chr2R 12736150 12736162 10 79 6.5 10.0 8.2 1.1 92 chr2R 12736070 intron CG42663 + chr2R 12736116 intron CG42663 + chr2R 12736162 intron CG42663 + chr2R_10_12735001 chr2R_12735001 KN35_1-HE 1013 chr2R 12736085 12736096 chr2R 12736149 12736176 15 76 3.0 9.5 6.2 2.1 91 chr2R 12736085 intron CG42663 + chr2R 12736130 intron CG42663 + chr2R 12736176 intron CG42663 + chr2R_15_12735001 chr2R_12735001 KN35_1-HE 1014 chr2R 12771351 12771359 chr2R 12771446 12771454 4 95 2.5 5.5 4.0 0.8 103 chr2R 12771351 intergenic not near genes chr2R 12771402 intergenic not near genes chr2R 12771454 intergenic not near genes chr2R_4_12770001 chr2R_12770001 KN35_1-HE 1015 chr2R 12789291 12789328 chr2R 12797655 12797692 roo 14 8362 0.5 3.5 2.0 4.7 8401 chr2R 12789291 intron,3` UTR sca +,CR45137 - chr2R 12793492 intron,intron sca +,CR45137 - chr2R 12797692 intron,3` UTR sca +,CR45137 - chr2R_14_12790001 chr2R_12790001 KN35_1-HE 1016 chr2R 12802145 12802167 chr2R 12802223 12802245 4 76 6.0 8.0 7.0 0.5 100 chr2R 12802145 intergenic sca + chr2R 12802195 intergenic sca + chr2R 12802245 intergenic sca + chr2R_4_12800001 chr2R_12800001 KN35_1-HE 1017 chr2R 12836387 12836416 chr2R 12836475 12836504 18 88 7.0 7.0 7.0 2.2 117 chr2R 12836387 intergenic not near genes chr2R 12836446 intergenic not near genes chr2R 12836504 intergenic not near genes chr2R_18_12835001 chr2R_12835001 KN35_1-HE 1018 chr2R 12845378 12845411 chr2R 12845538 12845571 12 160 6.0 1.5 3.8 2.5 193 chr2R 12845378 intergenic CG17575 - chr2R 12845474 intergenic CG17575 - chr2R 12845571 3` UTR CG17575 - chr2R_12_12845001 chr2R_12845001 KN35_1-HE 1019 chr2R 12887389 12887406 chr2R 12887641 12887658 11 252 0.0 3.5 1.8 3.9 269 chr2R 12887389 intron vg + chr2R 12887524 intron vg + chr2R 12887658 intron vg + chr2R_11_12885001 chr2R_12885001 KN35_1-HE 1020 chr2R 12897458 12897486 chr2R 12897550 12897578 13 92 1.5 5.5 3.5 2.9 120 chr2R 12897458 intron vg + chr2R 12897518 intron vg + chr2R 12897578 intron vg + chr2R_13_12895001 chr2R_12895001 KN35_1-HE 1021 chr2R 12913124 12913136 chr2R 12913201 12913213 5 77 8.0 6.5 7.2 0.6 89 chr2R 12913124 intergenic not near genes chr2R 12913168 intergenic not near genes chr2R 12913213 intergenic not near genes chr2R_5_12910001 chr2R_12910001 KN35_1-HE 1022 chr2R 12950120 12950133 chr2R 12950204 12950217 7 84 6.5 0.0 3.2 1.7 97 chr2R 12950120 intron CG44251 - chr2R 12950168 intron CG44251 - chr2R 12950217 intron CG44251 - chr2R_7_12950001 chr2R_12950001 KN35_1-HE 1023 chr2R 12982113 12982126 chr2R 12982267 12982281 6 154 1.0 3.0 2.0 2.0 168 chr2R 12982113 intergenic not near genes chr2R 12982197 intergenic not near genes chr2R 12982281 intergenic not near genes chr2R_6_12980001 chr2R_12980001 KN35_1-HE 1024 chr2R 12992761 12992792 chr2R 12992941 12992972 21 180 8.0 5.0 6.5 2.8 211 chr2R 12992761 intergenic not near genes chr2R 12992866 intergenic not near genes chr2R 12992972 intergenic not near genes chr2R_21_12990001 chr2R_12990001 KN35_1-HE 1025 chr2R 13034681 13034692 chr2R 13034791 13034802 5 110 0.0 7.0 3.5 1.1 121 chr2R 13034681 intergenic not near genes chr2R 13034742 intergenic not near genes chr2R 13034802 intergenic not near genes chr2R_5_13030001 chr2R_13030001 KN35_1-HE 1026 chr2R 13040075 13040082 chr2R 13040169 13040176 6 94 0.0 3.5 1.8 2.1 101 chr2R 13040075 intergenic not near genes chr2R 13040126 intergenic not near genes chr2R 13040176 intergenic not near genes chr2R_6_13040001 chr2R_13040001 KN35_1-HE 1027 chr2R 13136839 13136861 chr2R 13141638 13141660 Doc 14 4799 5.5 4.5 5.0 2.3 4821 chr2R 13136839 exon Cap-G + chr2R 13139250 intron Cap-G + chr2R 13141660 intron Cap-G + chr2R_14_13135001 chr2R_13135001 KN35_1-HE 1028 chr2R 13167427 13167460 chr2R 13167522 13167555 15 95 1.5 0.0 0.8 8.3 128 chr2R 13167427 intron GLaz - chr2R 13167491 intron GLaz - chr2R 13167555 intron GLaz - chr2R_15_13165001 chr2R_13165001 KN35_1-HE 1029 chr2R 13218305 13218398 chr2R 13218389 13218476 9 81 0.0 0.0 0.0 9.0 171 chr2R 13218305 intron CG4630 - chr2R 13218390 intron CG4630 - chr2R 13218476 intron CG4630 - chr2R_9_13215001 chr2R_13215001 KN35_1-HE 1030 chr2R 13220537 13220541 chr2R 13220637 13220641 4 100 0.0 5.5 2.8 1.1 104 chr2R 13220537 intron CG17059 + chr2R 13220589 intron CG17059 + chr2R 13220641 intron CG17059 + chr2R_4_13220001 chr2R_13220001 KN35_1-HE 1031 chr2R 13249586 13249595 chr2R 13249676 13249685 5 90 0.0 3.0 1.5 2.0 99 chr2R 13249586 intron CG4712 - chr2R 13249636 intron CG4712 - chr2R 13249685 intron CG4712 - chr2R_5_13245001 chr2R_13245001 KN35_1-HE 1032 chr2R 13403922 13403939 chr2R 13404008 13404025 4 86 0.5 5.0 2.8 1.1 103 chr2R 13403922 intergenic not near genes chr2R 13403974 intergenic not near genes chr2R 13404025 intergenic not near genes chr2R_4_13400001 chr2R_13400001 KN35_1-HE 1033 chr2R 13431851 13431873 chr2R 13431959 13431981 11 108 3.5 6.0 4.8 1.9 130 chr2R 13431851 intron CG42321 - chr2R 13431916 intron CG42321 - chr2R 13431981 intron CG42321 - chr2R_11_13430001 chr2R_13430001 KN35_1-HE 1034 chr2R 13439110 13439224 chr2R 13439226 13439301 8 118 0.0 0.0 0.0 8.0 191 chr2R 13439110 intergenic CG42321 -,cnn - chr2R 13439206 intergenic cnn -,CG42321 - chr2R 13439301 intergenic cnn -,CG42321 - chr2R_8_13435001 chr2R_13435001 KN35_1-HE 1035 chr2R 13446689 13446710 chr2R 13446771 13446792 8 82 6.5 0.0 3.2 1.9 103 chr2R 13446689 intron cnn - chr2R 13446740 intron cnn - chr2R 13446792 intron cnn - chr2R_8_13445001 chr2R_13445001 KN35_1-HE 1036 chr2R 13580501 13580528 chr2R 13580851 13580875 jockey 4 350 0.5 6.5 3.5 0.9 374 chr2R 13580501 3` UTR CG6191 - chr2R 13580688 3` UTR,3` UTR CG6191 -,CG45088 - chr2R 13580875 3` UTR,3` UTR CG6191 -,CG45088 - chr2R_4_13580001 chr2R_13580001 KN35_1-HE 1037 chr2R 13616598 13616627 chr2R 13616676 13616705 11 78 4.5 1.5 3.0 2.8 107 chr2R 13616598 intergenic not near genes chr2R 13616652 intergenic not near genes chr2R 13616705 intergenic not near genes chr2R_11_13615001 chr2R_13615001 KN35_1-HE 1038 chr2R 13692314 13692350 chr2R 13692399 13692435 14 85 4.0 4.0 4.0 2.8 121 chr2R 13692314 intron,intron fas +,CG6220 - chr2R 13692374 intron,intron fas +,CG6220 - chr2R 13692435 intron,intron fas +,CG6220 - chr2R_14_13690001 chr2R_13690001 KN35_1-HE 1039 chr2R 13700935 13700960 chr2R 13701268 13701293 7 333 3.0 2.0 2.5 2.0 358 chr2R 13700935 intron fas + chr2R 13701114 intron fas + chr2R 13701293 intron fas + chr2R_7_13700001 chr2R_13700001 KN35_1-HE 1040 chr2R 13721205 13721229 chr2R 13721289 13721313 8 84 3.0 7.0 5.0 1.3 108 chr2R 13721205 intron fas + chr2R 13721259 intron fas + chr2R 13721313 intron fas + chr2R_8_13720001 chr2R_13720001 KN35_1-HE 1041 chr2R 13728132 13728166 chr2R 13735790 13735824 opus 20 7658 7.0 5.5 6.2 2.8 7692 chr2R 13728132 intron fas + chr2R 13731978 intron fas + chr2R 13735824 intron fas + chr2R_20_13730001 chr2R_13730001 KN35_1-HE 1042 chr2R 13768978 13769010 chr2R 13769078 13769110 8 99 3.0 5.5 4.2 1.5 132 chr2R 13768978 intergenic not near genes chr2R 13769044 intergenic not near genes chr2R 13769110 intergenic not near genes chr2R_8_13765001 chr2R_13765001 KN35_1-HE 1043 chr2R 13770518 13770527 chr2R 13770609 13770618 4 91 0.0 7.5 3.8 0.8 100 chr2R 13770518 intron Cpr50Ca + chr2R 13770568 intron Cpr50Ca + chr2R 13770618 intron Cpr50Ca + chr2R_4_13770001 chr2R_13770001 KN35_1-HE 1044 chr2R 13790327 13790340 chr2R 13790404 13790417 5 77 2.0 0.0 1.0 2.5 90 chr2R 13790327 intergenic not near genes chr2R 13790372 intergenic not near genes chr2R 13790417 intergenic not near genes chr2R_5_13790001 chr2R_13790001 KN35_1-HE 1045 chr2R 13793147 13793161 chr2R 13793224 13793226 8 76 7.0 1.5 4.2 1.5 79 chr2R 13793147 intergenic not near genes chr2R 13793186 intergenic not near genes chr2R 13793226 intergenic not near genes chr2R_8_13790001 chr2R_13790001 KN35_1-HE 1046 chr2R 13813458 13813475 chr2R 13813541 13813558 9 83 2.0 3.0 2.5 2.6 100 chr2R 13813458 intron stj + chr2R 13813508 intron stj + chr2R 13813558 intron stj + chr2R_9_13810001 chr2R_13810001 KN35_1-HE 1047 chr2R 13888762 13888781 chr2R 13888840 13888859 6 78 4.0 0.0 2.0 2.0 97 chr2R 13888762 intron shot - chr2R 13888810 intron shot - chr2R 13888859 intron shot - chr2R_6_13885001 chr2R_13885001 KN35_1-HE 1048 chr2R 13905602 13905633 chr2R 13907585 13907614 Rt1a 11 1983 3.0 3.0 3.0 2.8 2012 chr2R 13905602 intron shot - chr2R 13906608 intron shot - chr2R 13907614 intron shot - chr2R_11_13905001 chr2R_13905001 KN35_1-HE 1049 chr2R 13912364 13912395 chr2R 13912470 13912501 18 106 8.0 7.0 7.5 2.1 137 chr2R 13912364 intron shot - chr2R 13912432 intron shot - chr2R 13912501 intron shot - chr2R_18_13910001 chr2R_13910001 KN35_1-HE 1050 chr2R 13924233 13924269 chr2R 13924334 13924370 16 101 4.0 0.0 2.0 5.3 137 chr2R 13924233 intron shot - chr2R 13924302 intron shot - chr2R 13924370 intron shot - chr2R_16_13920001 chr2R_13920001 KN35_1-HE 1051 chr2R 13925847 13925870 chr2R 13926024 13926047 18 177 6.0 4.5 5.2 2.9 200 chr2R 13925847 intron shot - chr2R 13925947 intron shot - chr2R 13926047 intron shot - chr2R_18_13925001 chr2R_13925001 KN35_1-HE 1052 chr2R 13986878 13986910 chr2R 13986968 13987000 21 90 3.0 4.0 3.5 4.7 122 chr2R 13986878 intron RN-tre - chr2R 13986939 intron RN-tre - chr2R 13987000 intron RN-tre - chr2R_21_13985001 chr2R_13985001 KN35_1-HE 1053 chr2R 14012314 14012342 chr2R 14012434 14012450 6 115 2.5 7.0 4.8 1.0 136 chr2R 14012314 intron mam + chr2R 14012382 intron mam + chr2R 14012450 intron mam + chr2R_6_14010001 chr2R_14010001 KN35_1-HE 1054 chr2R 14018157 14018193 chr2R 14018242 14018278 12 85 2.0 5.5 3.8 2.5 121 chr2R 14018157 intron mam + chr2R 14018218 intron mam + chr2R 14018278 intron mam + chr2R_12_14015001 chr2R_14015001 KN35_1-HE 1055 chr2R 14037269 14037299 chr2R 14037353 14037383 8 84 0.0 5.5 2.8 2.1 114 chr2R 14037269 intron mam + chr2R 14037326 intron mam + chr2R 14037383 intron mam + chr2R_8_14035001 chr2R_14035001 KN35_1-HE 1056 chr2R 14093434 14093444 chr2R 14109586 14109596 6 16152 6.0 5.5 5.8 0.9 16162 chr2R 14093434 intron Prosap - chr2R 14101515 intron Prosap - chr2R 14109596 intron Prosap - chr2R_6_14100001 chr2R_14100001 KN35_1-HE 1057 chr2R 14252401 14252429 chr2R 14252492 14252520 13 91 4.5 2.0 3.2 3.1 119 chr2R 14252401 3` UTR Mdr50 + chr2R 14252460 3` UTR Mdr50 + chr2R 14252520 3` UTR Mdr50 + chr2R_13_14250001 chr2R_14250001 KN35_1-HE 1058 chr2R 14327756 14327788 chr2R 14327852 14327884 10 94 4.0 3.0 3.5 2.2 128 chr2R 14327756 exon Shroom + chr2R 14327820 exon Shroom + chr2R 14327884 exon Shroom + chr2R_10_14325001 chr2R_14325001 KN35_1-HE 1059 chr2R 14357556 14357576 chr2R 14357647 14357667 12 91 3.5 6.5 5.0 2.0 111 chr2R 14357556 intergenic CG8617 -,Arc1 - chr2R 14357612 intergenic Arc1 -,CG8617 - chr2R 14357667 intergenic Arc1 -,CG8617 - chr2R_12_14355001 chr2R_14355001 KN35_1-HE 1060 chr2R 14392887 14392917 chr2R 14392972 14393002 19 85 1.0 5.5 3.2 4.5 115 chr2R 14392887 intergenic not near genes chr2R 14392944 intergenic not near genes chr2R 14393002 intergenic not near genes chr2R_19_14390001 chr2R_14390001 KN35_1-HE 1061 chr2R 14393864 14393899 chr2R 14393950 14393985 17 86 5.0 2.0 3.5 3.8 121 chr2R 14393864 intergenic not near genes chr2R 14393924 intergenic not near genes chr2R 14393985 intergenic not near genes chr2R_17_14390001 chr2R_14390001 KN35_1-HE 1062 chr2R 14400523 14400553 chr2R 14400603 14400633 11 80 0.5 3.0 1.8 3.9 110 chr2R 14400523 intergenic not near genes chr2R 14400578 intergenic not near genes chr2R 14400633 intergenic not near genes chr2R_11_14400001 chr2R_14400001 KN35_1-HE 1063 chr2R 14405419 14405453 chr2R 14405782 14405816 18 363 4.5 1.0 2.8 4.7 397 chr2R 14405419 intergenic not near genes chr2R 14405618 intergenic not near genes chr2R 14405816 intergenic not near genes chr2R_18_14405001 chr2R_14405001 KN35_1-HE 1064 chr2R 14467292 14467325 chr2R 14476445 14476478 roo 12 9153 4.0 4.0 4.0 2.4 9186 chr2R 14467292 intergenic not near genes chr2R 14471885 intergenic not near genes chr2R 14476478 5` UTR CR44462 + chr2R_12_14470001 chr2R_14470001 KN35_1-HE 1065 chr2R 14497414 14497422 chr2R 14498581 14498589 1360 10 1167 0.0 18.0 9.0 1.0 1175 chr2R 14497414 3` UTR Cpsf160 - chr2R 14498002 intron Cpsf160 - chr2R 14498589 3` UTR Cpsf160 - chr2R_10_14495001 chr2R_14495001 KN35_1-HE 1066 chr2R 14514487 14514500 chr2R 14514581 14514594 7 94 7.5 4.5 6.0 1.0 107 chr2R 14514487 intron,intron Cpr51A -,CG30197 + chr2R 14514540 intron,intron Cpr51A -,CG30197 + chr2R 14514594 intron,intron Cpr51A -,CG30197 + chr2R_7_14510001 chr2R_14510001 KN35_1-HE 1067 chr2R 14539155 14539179 chr2R 14539385 14539409 7 230 3.5 6.5 5.0 1.2 254 chr2R 14539155 intron ttv + chr2R 14539282 intron ttv + chr2R 14539409 intron ttv + chr2R_7_14535001 chr2R_14535001 KN35_1-HE 1068 chr2R 14540328 14540362 chr2R 14540407 14540441 20 79 4.5 6.0 5.2 3.2 113 chr2R 14540328 intron ttv + chr2R 14540384 intron ttv + chr2R 14540441 intron ttv + chr2R_20_14540001 chr2R_14540001 KN35_1-HE 1069 chr2R 14541224 14541253 chr2R 14541482 14541511 4 258 1.5 2.0 1.8 1.4 287 chr2R 14541224 intron ttv + chr2R 14541368 intron ttv + chr2R 14541511 intron ttv + chr2R_4_14540001 chr2R_14540001 KN35_1-HE 1070 chr2R 14544207 14544246 chr2R 14544430 14544469 17 223 2.5 4.0 3.2 4.0 262 chr2R 14544207 intron,3` UTR ttv +,CG30076 - chr2R 14544338 intron,3` UTR ttv +,CG30076 - chr2R 14544469 intron,exon ttv +,CG30076 - chr2R_17_14540001 chr2R_14540001 KN35_1-HE 1071 chr2R 14623876 14623894 chr2R 14623973 14623991 11 97 0.0 6.0 3.0 2.8 115 chr2R 14623876 intron Uhg5 + chr2R 14623934 5` UTR Uhg5 + chr2R 14623991 intron Uhg5 + chr2R_11_14620001 chr2R_14620001 KN35_1-HE 1072 chr2R 14626907 14626928 chr2R 14626987 14627008 10 80 3.5 4.0 3.8 2.1 101 chr2R 14626907 intergenic not near genes chr2R 14626958 intergenic not near genes chr2R 14627008 intergenic not near genes chr2R_10_14625001 chr2R_14625001 KN35_1-HE 1073 chr2R 14634859 14634863 chr2R 14635023 14635027 7 164 14.5 6.5 10.5 0.6 168 chr2R 14634859 intergenic not near genes chr2R 14634943 intergenic not near genes chr2R 14635027 intergenic not near genes chr2R_7_14630001 chr2R_14630001 KN35_1-HE 1074 chr2R 14634864 14634892 chr2R 14635020 14635055 19 162 5.5 5.0 5.2 3.1 191 chr2R 14634864 intergenic not near genes chr2R 14634960 intergenic not near genes chr2R 14635055 intergenic not near genes chr2R_19_14630001 chr2R_14630001 KN35_1-HE 1075 chr2R 14659328 14659333 chr2R 14659408 14659413 6 80 13.5 3.5 8.5 0.6 85 chr2R 14659328 intergenic not near genes chr2R 14659370 intergenic not near genes chr2R 14659413 intergenic not near genes chr2R_6_14655001 chr2R_14655001 KN35_1-HE 1076 chr2R 1355075 1355079 chr2R 14765425 14765429 4 13410350 23.0 22.5 22.8 0.2 13410354 chr2R 1355075 intron l(2)41Ab + chr2R 8060252 intron CG12769 - chr2R 14765429 intron Spred - chr2R_4_8060001 chr2R_8060001 KN35_1-HE 1077 chr2R 14796339 14796361 chr2R 14796436 14796459 15 98 6.0 6.5 6.2 2.1 120 chr2R 14796339 intron kn - chr2R 14796399 intron kn - chr2R 14796459 intron kn - chr2R_15_14795001 chr2R_14795001 KN35_1-HE 1078 chr2R 14816108 14816136 chr2R 14816205 14816233 17 97 6.5 8.0 7.2 2.1 125 chr2R 14816108 intergenic not near genes chr2R 14816170 intergenic not near genes chr2R 14816233 intergenic not near genes chr2R_17_14815001 chr2R_14815001 KN35_1-HE 1079 chr2R 14842388 14842395 chr2R 14842485 14842492 4 97 3.0 2.0 2.5 1.1 104 chr2R 14842388 intergenic NaPi-T - chr2R 14842440 intergenic NaPi-T - chr2R 14842492 intergenic NaPi-T - chr2R_4_14840001 chr2R_14840001 KN35_1-HE 1080 chr2R 14855022 14855027 chr2R 14855153 14855158 4 131 12.0 1.0 6.5 0.5 136 chr2R 14855022 5` UTR Ciao1 - chr2R 14855090 intergenic Ciao1 -,HPS1 + chr2R 14855158 intergenic Ciao1 -,HPS1 + chr2R_4_14855001 chr2R_14855001 KN35_1-HE 1081 chr2R 14853063 14853098 chr2R 14857235 14857270 13 4173 26.0 22.0 24.0 0.5 4207 chr2R 14853063 exon Ercc1 + chr2R 14855166 intergenic Ciao1 -,HPS1 + chr2R 14857270 exon HPS1 + chr2R_13_14855001 chr2R_14855001 KN35_1-HE 1082 chr2R 14888081 14888108 chr2R 14888170 14888197 17 88 4.5 5.5 5.0 2.8 116 chr2R 14888081 exon Cyp6a8 - chr2R 14888139 exon Cyp6a8 - chr2R 14888197 exon Cyp6a8 - chr2R_17_14885001 chr2R_14885001 KN35_1-HE 1083 chr2R 14889206 14889235 chr2R 14897815 14897844 Max-element 13 8609 4.5 0.0 2.2 4.1 8638 chr2R 14889206 intergenic Cyp6a8 - chr2R 14893525 intergenic not near genes chr2R 14897844 intergenic not near genes chr2R_13_14890001 chr2R_14890001 KN35_1-HE 1084 chr2R 14911700 14911728 chr2R 14911824 14911852 12 124 5.0 4.0 4.5 2.2 152 chr2R 14911700 intron CG10249 - chr2R 14911776 intron CG10249 - chr2R 14911852 intron CG10249 - chr2R_12_14910001 chr2R_14910001 KN35_1-HE 1085 chr2R 14917847 14917883 chr2R 14917933 14917969 18 86 1.5 4.0 2.8 4.7 122 chr2R 14917847 intron CG10249 - chr2R 14917908 intron CG10249 - chr2R 14917969 intron CG10249 - chr2R_18_14915001 chr2R_14915001 KN35_1-HE 1086 chr2R 14922141 14922174 chr2R 14922218 14922251 18 77 6.5 4.5 5.5 2.8 110 chr2R 14922141 intron CG10249 - chr2R 14922196 intron CG10249 - chr2R 14922251 intron CG10249 - chr2R_18_14920001 chr2R_14920001 KN35_1-HE 1087 chr2R 14940660 14940687 chr2R 14940745 14940780 8 90 2.5 3.5 3.0 2.0 120 chr2R 14940660 3` UTR Lap1 + chr2R 14940720 3` UTR Lap1 + chr2R 14940780 intergenic Lap1 + chr2R_8_14940001 chr2R_14940001 KN35_1-HE 1088 chr2R 14955665 14955700 chr2R 14955755 14955790 19 90 3.0 0.0 1.5 7.6 125 chr2R 14955665 intron aPKC - chr2R 14955728 intron aPKC - chr2R 14955790 intron aPKC - chr2R_19_14955001 chr2R_14955001 KN35_1-HE 1089 chr2R 14957668 14957676 chr2R 14957764 14957772 7 96 2.5 0.0 1.2 3.2 104 chr2R 14957668 intron aPKC - chr2R 14957720 intron aPKC - chr2R 14957772 intron aPKC - chr2R_7_14955001 chr2R_14955001 KN35_1-HE 1090 chr2R 14968061 14968087 chr2R 14968141 14968166 6 79 0.0 5.5 2.8 1.6 105 chr2R 14968061 intron ckn + chr2R 14968114 intron ckn + chr2R 14968166 intron ckn + chr2R_6_14965001 chr2R_14965001 KN35_1-HE 1091 chr2R 14968439 14968469 chr2R 14968522 14968552 16 81 7.5 7.5 7.5 1.9 113 chr2R 14968439 intron ckn + chr2R 14968496 intron ckn + chr2R 14968552 intron ckn + chr2R_16_14965001 chr2R_14965001 KN35_1-HE 1092 chr2R 14979762 14979794 chr2R 14979839 14979871 17 77 7.5 5.0 6.2 2.4 109 chr2R 14979762 3` UTR ckn + chr2R 14979816 3` UTR ckn + chr2R 14979871 3` UTR ckn + chr2R_17_14975001 chr2R_14975001 KN35_1-HE 1093 chr2R 15004724 15004759 chr2R 15005054 15005089 jockey 19 330 4.0 3.5 3.8 4.0 365 chr2R 15004724 intergenic not near genes chr2R 15004906 intergenic not near genes chr2R 15005089 intergenic not near genes chr2R_19_15000001 chr2R_15000001 KN35_1-HE 1094 chr2R 15015456 15015468 chr2R 15022881 15022893 mdg1 5 7425 10.0 2.0 6.0 0.7 7437 chr2R 15015456 intron hbs + chr2R 15019174 intron hbs + chr2R 15022893 intron hbs + chr2R_5_15015001 chr2R_15015001 KN35_1-HE 1095 chr2R 15065622 15065648 chr2R 15065701 15065727 9 79 2.0 2.0 2.0 3.0 105 chr2R 15065622 intergenic not near genes chr2R 15065674 intergenic not near genes chr2R 15065727 intergenic not near genes chr2R_9_15065001 chr2R_15065001 KN35_1-HE 1096 chr2R 15081749 15081778 chr2R 15081854 15081882 6 104 2.0 2.5 2.2 1.9 133 chr2R 15081749 intergenic not near genes chr2R 15081816 intergenic not near genes chr2R 15081882 intergenic not near genes chr2R_6_15080001 chr2R_15080001 KN35_1-HE 1097 chr2R 15084985 15085003 chr2R 15092035 15092053 297 5 7050 1.5 8.0 4.8 0.9 7068 chr2R 15084985 intergenic not near genes chr2R 15088519 intergenic not near genes chr2R 15092053 5` UTR CR44457 + chr2R_5_15085001 chr2R_15085001 KN35_1-HE 1098 chr2R 15094882 15094917 chr2R 15094960 15094995 14 78 4.5 3.5 4.0 2.8 113 chr2R 15094882 intergenic not near genes chr2R 15094938 intergenic not near genes chr2R 15094995 intergenic not near genes chr2R_14_15090001 chr2R_15090001 KN35_1-HE 1099 chr2R 15119316 15119351 chr2R 15127798 15127833 Tirant 18 8482 2.5 5.0 3.8 3.8 8517 chr2R 15119316 intron chn + chr2R 15123574 intron chn + chr2R 15127833 intron chn + chr2R_18_15120001 chr2R_15120001 KN35_1-HE 1100 chr2R 15150691 15150716 chr2R 15150787 15150812 8 96 3.0 1.5 2.2 2.5 121 chr2R 15150691 intergenic not near genes chr2R 15150752 intergenic not near genes chr2R 15150812 intergenic not near genes chr2R_8_15150001 chr2R_15150001 KN35_1-HE 1101 chr2R 15193337 15193348 chr2R 15193416 15193427 9 79 5.0 0.0 2.5 2.6 90 chr2R 15193337 intergenic Sfp51E - chr2R 15193382 intergenic Sfp51E - chr2R 15193427 intergenic Sfp51E - chr2R_9_15190001 chr2R_15190001 KN35_1-HE 1102 chr2R 15230388 15230393 chr2R 15231098 15231103 4 710 20.0 4.0 12.0 0.3 715 chr2R 15230388 intron,5` UTR Fs -,CR44370 + chr2R 15230746 intron,5` UTR Fs -,CR44370 + chr2R 15231103 intron,5` UTR Fs -,CR44370 + chr2R_4_15230001 chr2R_15230001 KN35_1-HE 1103 chr2R 15259062 15259094 chr2R 15259147 15259179 7 85 2.0 2.5 2.2 2.2 117 chr2R 15259062 intron ItgalphaPS4 + chr2R 15259120 intron ItgalphaPS4 + chr2R 15259179 intron ItgalphaPS4 + chr2R_7_15255001 chr2R_15255001 KN35_1-HE 1104 chr2R 15390408 15390416 chr2R 15390503 15390511 5 95 1.0 2.5 1.8 1.8 103 chr2R 15390408 intergenic not near genes chr2R 15390460 intergenic not near genes chr2R 15390511 intergenic not near genes chr2R_5_15390001 chr2R_15390001 KN35_1-HE 1105 chr2R 15391795 15391824 chr2R 15391882 15391911 10 87 3.0 7.5 5.2 1.6 116 chr2R 15391795 intergenic not near genes chr2R 15391853 intergenic not near genes chr2R 15391911 intergenic not near genes chr2R_10_15390001 chr2R_15390001 KN35_1-HE 1106 chr2R 15402813 15402848 chr2R 15402911 15402943 14 98 4.5 2.5 3.5 3.1 130 chr2R 15402813 intron CG43729 + chr2R 15402878 intron CG43729 + chr2R 15402943 intron CG43729 + chr2R_14_15400001 chr2R_15400001 KN35_1-HE 1107 chr2R 15496267 15496300 chr2R 15496348 15496381 18 81 4.5 2.0 3.2 4.3 114 chr2R 15496267 intron CG12964 - chr2R 15496324 intron CG12964 - chr2R 15496381 intron CG12964 - chr2R_18_15495001 chr2R_15495001 KN35_1-HE 1108 chr2R 15498160 15498193 chr2R 15498243 15498276 9 83 4.0 0.0 2.0 3.0 116 chr2R 15498160 intergenic not near genes chr2R 15498218 intergenic not near genes chr2R 15498276 intergenic not near genes chr2R_9_15495001 chr2R_15495001 KN35_1-HE 1109 chr2R 15546737 15546749 chr2R 15546828 15546840 8 91 3.5 6.0 4.8 1.4 103 chr2R 15546737 intron CG8192 - chr2R 15546788 intron CG8192 - chr2R 15546840 intron CG8192 - chr2R_8_15545001 chr2R_15545001 KN35_1-HE 1110 chr2R 15585638 15585646 chr2R 15585718 15585726 7 80 11.5 0.0 5.8 1.0 88 chr2R 15585638 intergenic not near genes chr2R 15585682 intergenic not near genes chr2R 15585726 intergenic not near genes chr2R_7_15585001 chr2R_15585001 KN35_1-HE 1111 chr2R 15593305 15593310 chr2R 15593407 15593412 5 102 10.5 6.0 8.2 0.5 107 chr2R 15593305 intergenic not near genes chr2R 15593358 intergenic not near genes chr2R 15593412 intergenic not near genes chr2R_5_15590001 chr2R_15590001 KN35_1-HE 1112 chr2R 15617119 15617153 chr2R 15617217 15617251 24 98 6.5 9.0 7.8 2.7 132 chr2R 15617119 intron CG42524 + chr2R 15617185 intron CG42524 + chr2R 15617251 intron CG42524 + chr2R_24_15615001 chr2R_15615001 KN35_1-HE 1113 chr2R 15645765 15645797 chr2R 15645979 15646011 18 214 41.5 37.0 39.2 0.4 246 chr2R 15645765 intron CG42524 + chr2R 15645888 intron CG42524 + chr2R 15646011 intron CG42524 + chr2R_18_15645001 chr2R_15645001 KN35_1-HE 1114 chr2R 15653908 15653940 chr2R 15653994 15654026 16 86 3.5 3.0 3.2 3.8 118 chr2R 15653908 intron CG42524 + chr2R 15653967 intron CG42524 + chr2R 15654026 intron CG42524 + chr2R_16_15650001 chr2R_15650001 KN35_1-HE 1115 chr2R 15685361 15685382 chr2R 15685465 15685486 5 104 8.5 2.5 5.5 0.8 125 chr2R 15685361 intron,exon Ranbp11 +,CG30082 - chr2R 15685424 intron,intron Ranbp11 +,CG30082 - chr2R 15685486 intron,intron Ranbp11 +,CG30082 - chr2R_5_15685001 chr2R_15685001 KN35_1-HE 1116 chr2R 15700237 15700273 chr2R 15700353 15700389 9 116 4.0 4.5 4.2 1.7 152 chr2R 15700237 intron,5` UTR CG30080 -,CG42662 - chr2R 15700313 intron,5` UTR CG30080 -,CG42662 - chr2R 15700389 intron,5` UTR CG30080 -,CG42662 - chr2R_9_15700001 chr2R_15700001 KN35_1-HE 1117 chr2R 15720786 15720797 chr2R 15720883 15720894 9 97 2.5 12.0 7.2 1.1 108 chr2R 15720786 intergenic not near genes chr2R 15720840 intergenic not near genes chr2R 15720894 intergenic not near genes chr2R_9_15720001 chr2R_15720001 KN35_1-HE 1118 chr2R 15845179 15845183 chr2R 15845259 15845263 4 80 0.0 9.5 4.8 0.7 84 chr2R 15845179 intron,intron tun +,CG8249 - chr2R 15845221 intron,intron tun +,CG8249 - chr2R 15845263 intron,intron tun +,CG8249 - chr2R_4_15845001 chr2R_15845001 KN35_1-HE 1119 chr2R 15869337 15869352 chr2R 15869418 15869430 6 80 2.5 1.0 1.8 2.1 93 chr2R 15869337 intergenic sli -,Rif1 - chr2R 15869384 intergenic sli -,Rif1 - chr2R 15869430 intergenic sli -,Rif1 - chr2R_6_15865001 chr2R_15865001 KN35_1-HE 1120 chr2R 15891828 15891835 chr2R 15891904 15891912 8 77 3.0 6.5 4.8 1.4 84 chr2R 15891828 intron sli - chr2R 15891870 intron sli - chr2R 15891912 intron sli - chr2R_8_15890001 chr2R_15890001 KN35_1-HE 1121 chr2R 15987951 15987978 chr2R 15988031 15988058 4 80 2.0 2.0 2.0 1.3 107 chr2R 15987951 intron,5` UTR Strn-Mlck -,CR45021 + chr2R 15988004 intron,5` UTR Strn-Mlck -,CR45021 + chr2R 15988058 intron,5` UTR Strn-Mlck -,CR45021 + chr2R_4_15985001 chr2R_15985001 KN35_1-HE 1122 chr2R 16047310 16047344 chr2R 16047394 16047428 15 84 2.5 2.0 2.2 4.7 118 chr2R 16047310 intergenic SP2353 +,CG8405 + chr2R 16047369 intergenic SP2353 +,CG8405 + chr2R 16047428 intergenic SP2353 +,CG8405 + chr2R_15_16045001 chr2R_16045001 KN35_1-HE 1123 chr2R 16066143 16066151 chr2R 16066220 16066228 4 77 4.0 10.0 7.0 0.5 85 chr2R 16066143 intergenic not near genes chr2R 16066186 intergenic not near genes chr2R 16066228 intergenic not near genes chr2R_4_16065001 chr2R_16065001 KN35_1-HE 1124 chr2R 16163488 16163501 chr2R 16163633 16163646 8 144 6.5 7.5 7.0 1.0 158 chr2R 16163488 intron lbk + chr2R 16163567 intron lbk + chr2R 16163646 intron lbk + chr2R_8_16160001 chr2R_16160001 KN35_1-HE 1125 chr2R 16245418 16245431 chr2R 16245513 16245526 9 95 1.0 6.0 3.5 2.0 108 chr2R 16245418 intron CngA - chr2R 16245472 intron CngA - chr2R 16245526 intron CngA - chr2R_9_16245001 chr2R_16245001 KN35_1-HE 1126 chr2R 16316842 16316858 chr2R 16322887 16322903 6 6046 28.0 13.5 20.8 0.3 6061 chr2R 16316842 exon CG8060 - chr2R 16319872 exon CG8060 - chr2R 16322903 exon CG4282 + chr2R_6_16315001 chr2R_16315001 KN35_1-HE 1127 chr2R 16352016 16352034 chr2R 16352165 16352183 11 149 7.5 3.5 5.5 1.7 167 chr2R 16352016 intergenic not near genes chr2R 16352100 intergenic not near genes chr2R 16352183 intergenic not near genes chr2R_11_16350001 chr2R_16350001 KN35_1-HE 1128 chr2R 16352867 16352873 chr2R 16352951 16352957 4 84 1.5 3.0 2.2 1.2 90 chr2R 16352867 intergenic not near genes chr2R 16352912 intergenic not near genes chr2R 16352957 intergenic not near genes chr2R_4_16350001 chr2R_16350001 KN35_1-HE 1129 chr2R 16377863 16377889 chr2R 16377960 16377981 6 94 6.0 4.5 5.2 1.0 118 chr2R 16377863 intergenic not near genes chr2R 16377922 intergenic not near genes chr2R 16377981 intergenic not near genes chr2R_6_16375001 chr2R_16375001 KN35_1-HE 1130 chr2R 16380118 16380153 chr2R 16380217 16380252 12 99 2.0 3.0 2.5 3.4 134 chr2R 16380118 5` UTR,3` UTR CR45316 +,CR45317 - chr2R 16380185 3` UTR CR45317 - chr2R 16380252 intergenic CR45317 -,CR45316 +,CG43187 + chr2R_12_16380001 chr2R_16380001 KN35_1-HE 1131 chr2R 16385762 16385788 chr2R 16386158 16386184 16 396 0.0 3.0 1.5 6.4 422 chr2R 16385762 3` UTR CG43187 + chr2R 16385973 intergenic CG43187 + chr2R 16386184 intergenic Sema-2b +,CG43187 + chr2R_16_16385001 chr2R_16385001 KN35_1-HE 1132 chr2R 16426190 16426215 chr2R 16426274 16426299 12 84 0.0 4.0 2.0 4.0 109 chr2R 16426190 intron Sema-2b + chr2R 16426244 intron Sema-2b + chr2R 16426299 intron Sema-2b + chr2R_12_16425001 chr2R_16425001 KN35_1-HE 1133 chr2R 16467689 16467724 chr2R 16467788 16467823 8 99 11.0 14.5 12.8 0.6 134 chr2R 16467689 intergenic CheB53a + chr2R 16467756 intergenic CheB53a +,CheB53b + chr2R 16467823 intergenic CheB53a +,CheB53b + chr2R_8_16465001 chr2R_16465001 KN35_1-HE 1134 chr2R 16486871 16486878 chr2R 16486967 16486974 4 96 7.0 8.5 7.8 0.5 103 chr2R 16486871 exon CG33458 + chr2R 16486922 intron CG33458 + chr2R 16486974 intron CG33458 + chr2R_4_16485001 chr2R_16485001 KN35_1-HE 1135 chr2R 16489265 16489300 chr2R 16489350 16489385 9 85 3.5 2.5 3.0 2.2 120 chr2R 16489265 intergenic CG33459 + chr2R 16489325 intergenic CG33459 + chr2R 16489385 intergenic CG33459 + chr2R_9_16485001 chr2R_16485001 KN35_1-HE 1136 chr2R 16509788 16509821 chr2R 16509867 16509900 18 79 6.0 8.0 7.0 2.2 112 chr2R 16509788 intron Sema-2a + chr2R 16509844 intron Sema-2a + chr2R 16509900 intron Sema-2a + chr2R_18_16505001 chr2R_16505001 KN35_1-HE 1137 chr2R 16518044 16518064 chr2R 16518121 16518140 9 77 7.0 3.0 5.0 1.5 96 chr2R 16518044 intron Sema-2a + chr2R 16518092 intron Sema-2a + chr2R 16518140 intron Sema-2a + chr2R_9_16515001 chr2R_16515001 KN35_1-HE 1138 chr2R 16520577 16520605 chr2R 16520729 16520757 13 152 3.0 0.0 1.5 5.2 180 chr2R 16520577 intron Sema-2a + chr2R 16520667 intron Sema-2a + chr2R 16520757 intron Sema-2a + chr2R_13_16520001 chr2R_16520001 KN35_1-HE 1139 chr2R 16539638 16539656 chr2R 16544848 16544866 copia 18 5210 0.0 0.0 0.0 18.0 5228 chr2R 16539638 intergenic not near genes chr2R 16542252 intergenic not near genes chr2R 16544866 intergenic not near genes chr2R_18_16540001 chr2R_16540001 KN35_1-HE 1140 chr2R 16558269 16558282 chr2R 16558352 16558365 12 83 0.0 7.0 3.5 2.7 96 chr2R 16558269 3` UTR Syn2 + chr2R 16558317 3` UTR Syn2 + chr2R 16558365 3` UTR Syn2 + chr2R_12_16555001 chr2R_16555001 KN35_1-HE 1141 chr2R 16575967 16575979 chr2R 16576054 16576066 7 87 7.0 7.5 7.2 0.9 99 chr2R 16575967 intron CG8317 - chr2R 16576016 intron CG8317 - chr2R 16576066 intron CG8317 - chr2R_7_16575001 chr2R_16575001 KN35_1-HE 1142 chr2R 16585522 16585532 chr2R 16585784 16585794 6 262 2.0 4.0 3.0 1.5 272 chr2R 16585522 intergenic Cdk4 + chr2R 16585658 intergenic Cdk4 +,RpLP2 + chr2R 16585794 intergenic RpLP2 +,Cdk4 + chr2R_6_16585001 chr2R_16585001 KN35_1-HE 1143 chr2R 16695809 16695835 chr2R 16695971 16696000 9 165 6.0 4.0 5.0 1.5 191 chr2R 16695809 intron CG30463 - chr2R 16695904 intron CG30463 - chr2R 16696000 intron CG30463 - chr2R_9_16695001 chr2R_16695001 KN35_1-HE 1144 chr2R 16723922 16723947 chr2R 16724003 16724028 13 81 3.0 4.5 3.8 2.7 106 chr2R 16723922 intron CG30463 - chr2R 16723975 intron CG30463 - chr2R 16724028 intron CG30463 - chr2R_13_16720001 chr2R_16720001 KN35_1-HE 1145 chr2R 16732862 16732878 chr2R 16733033 16733049 14 171 8.0 6.0 7.0 1.8 187 chr2R 16732862 5` UTR CG30463 - chr2R 16732956 intergenic CG30463 - chr2R 16733049 intergenic CG30463 - chr2R_14_16730001 chr2R_16730001 KN35_1-HE 1146 chr2R 16800056 16800079 chr2R 16800138 16800161 6 82 0.0 0.0 0.0 6.0 105 chr2R 16800056 intergenic not near genes chr2R 16800108 intergenic not near genes chr2R 16800161 intergenic not near genes chr2R_6_16800001 chr2R_16800001 KN35_1-HE 1147 chr2R 16837883 16837914 chr2R 16838041 16838072 12 158 4.0 3.0 3.5 2.7 189 chr2R 16837883 5` UTR CR43650 + chr2R 16837978 5` UTR CR43650 + chr2R 16838072 5` UTR CR43650 + chr2R_12_16835001 chr2R_16835001 KN35_1-HE 1148 chr2R 16849861 16849879 chr2R 16849945 16849963 4 84 6.0 0.0 3.0 1.0 102 chr2R 16849861 5` UTR CR44467 + chr2R 16849912 intergenic CR44467 + chr2R 16849963 intergenic CR44467 +,IntS8 + chr2R_4_16845001 chr2R_16845001 KN35_1-HE 1149 chr2R 16880032 16880050 chr2R 16880110 16880128 11 78 5.0 0.0 2.5 3.1 96 chr2R 16880032 intron CG8910 - chr2R 16880080 intron CG8910 - chr2R 16880128 intron CG8910 - chr2R_11_16880001 chr2R_16880001 KN35_1-HE 1150 chr2R 16923834 16923841 chr2R 16923914 16923921 6 80 0.0 5.0 2.5 1.7 87 chr2R 16923834 intergenic not near genes chr2R 16923878 intergenic not near genes chr2R 16923921 intergenic not near genes chr2R_6_16920001 chr2R_16920001 KN35_1-HE 1151 chr2R 16935710 16935724 chr2R 16935801 16935815 7 91 6.5 5.5 6.0 1.0 105 chr2R 16935710 intron Pkc53E + chr2R 16935762 intron Pkc53E + chr2R 16935815 intron Pkc53E + chr2R_7_16935001 chr2R_16935001 KN35_1-HE 1152 chr2R 16938361 16938377 chr2R 16938500 16938516 7 139 0.0 7.0 3.5 1.6 155 chr2R 16938361 intron Pkc53E + chr2R 16938438 intron Pkc53E + chr2R 16938516 intron Pkc53E + chr2R_7_16935001 chr2R_16935001 KN35_1-HE 1153 chr2R 16982071 16982098 chr2R 16982150 16982177 14 79 0.5 3.5 2.0 4.7 106 chr2R 16982071 intron Cbp53E + chr2R 16982124 intron Cbp53E + chr2R 16982177 intron Cbp53E + chr2R_14_16980001 chr2R_16980001 KN35_1-HE 1154 chr2R 17048621 17048645 chr2R 17048701 17048725 6 80 2.0 1.5 1.8 2.1 104 chr2R 17048621 3` UTR CG9642 + chr2R 17048673 3` UTR CG9642 + chr2R 17048725 3` UTR CG9642 + chr2R_6_17045001 chr2R_17045001 KN35_1-HE 1155 chr2R 17065757 17065794 chr2R 17065850 17065883 6 87 0.5 2.5 1.5 2.4 126 chr2R 17065757 3` UTR CG6967 + chr2R 17065820 3` UTR CG6967 + chr2R 17065883 3` UTR CG6967 + chr2R_6_17065001 chr2R_17065001 KN35_1-HE 1156 chr2R 17079051 17079088 chr2R 17079134 17079170 11 82 2.5 4.0 3.2 2.6 119 chr2R 17079051 intron CG30460 - chr2R 17079110 intron CG30460 - chr2R 17079170 intron CG30460 - chr2R_11_17075001 chr2R_17075001 KN35_1-HE 1157 chr2R 17121312 17121345 chr2R 17121408 17121441 13 96 2.5 4.5 3.5 2.9 129 chr2R 17121312 5` UTR CR45272 + chr2R 17121376 5` UTR CR45272 + chr2R 17121441 5` UTR CR45272 + chr2R_13_17120001 chr2R_17120001 KN35_1-HE 1158 chr2R 17121925 17121960 chr2R 17122013 17122048 14 88 2.5 2.0 2.2 4.4 123 chr2R 17121925 5` UTR CR45272 + chr2R 17121986 5` UTR CR45272 + chr2R 17122048 5` UTR CR45272 + chr2R_14_17120001 chr2R_17120001 KN35_1-HE 1159 chr2R 17132855 17132869 chr2R 17132956 17132970 7 101 2.5 1.5 2.0 2.3 115 chr2R 17132855 intergenic not near genes chr2R 17132912 intergenic not near genes chr2R 17132970 intergenic Acp54A1 + chr2R_7_17130001 chr2R_17130001 KN35_1-HE 1160 chr2R 17147243 17147255 chr2R 17152275 17152287 jockey 4 5032 0.5 1.0 0.8 2.2 5044 chr2R 17147243 intergenic not near genes chr2R 17149765 intergenic not near genes chr2R 17152287 intergenic not near genes chr2R_4_17145001 chr2R_17145001 KN35_1-HE 1161 chr2R 17169220 17169225 chr2R 17169309 17169314 5 89 5.0 4.5 4.8 0.9 94 chr2R 17169220 intergenic not near genes chr2R 17169267 intergenic not near genes chr2R 17169314 intergenic not near genes chr2R_5_17165001 chr2R_17165001 KN35_1-HE 1162 chr2R 17236506 17236541 chr2R 17241711 17241746 copia 17 5205 2.5 4.5 3.5 3.8 5240 chr2R 17236506 intron mbl + chr2R 17239126 intron mbl + chr2R 17241746 intron mbl + chr2R_17_17235001 chr2R_17235001 KN35_1-HE 1163 chr2R 17253719 17253756 chr2R 17253813 17253850 19 94 4.0 5.0 4.5 3.5 131 chr2R 17253719 intron mbl + chr2R 17253784 intron,3` UTR mbl +,CR43660 - chr2R 17253850 intron,3` UTR mbl +,CR43660 - chr2R_19_17250001 chr2R_17250001 KN35_1-HE 1164 chr2R 17287664 17287691 chr2R 17287796 17287823 14 132 10.0 5.5 7.8 1.6 159 chr2R 17287664 intron mbl + chr2R 17287744 intron mbl + chr2R 17287823 intron mbl + chr2R_14_17285001 chr2R_17285001 KN35_1-HE 1165 chr2R 17296562 17296585 chr2R 17296644 17296667 8 82 6.0 0.0 3.0 2.0 105 chr2R 17296562 intron mbl + chr2R 17296614 intron mbl + chr2R 17296667 intron mbl + chr2R_8_17295001 chr2R_17295001 KN35_1-HE 1166 chr2R 17299617 17299637 chr2R 17300260 17300280 10 643 8.5 5.5 7.0 1.2 663 chr2R 17299617 intron mbl + chr2R 17299948 intron mbl + chr2R 17300280 intron mbl + chr2R_10_17295001 chr2R_17295001 KN35_1-HE 1167 chr2R 17331709 17331727 chr2R 17331786 17331804 12 77 2.0 5.5 3.8 2.5 95 chr2R 17331709 intron mbl + chr2R 17331756 intron mbl + chr2R 17331804 intron mbl + chr2R_12_17330001 chr2R_17330001 KN35_1-HE 1168 chr2R 17389272 17389304 chr2R 17389364 17389396 15 92 5.5 6.5 6.0 2.1 124 chr2R 17389272 intergenic CR44344 - chr2R 17389334 intergenic CR44344 - chr2R 17389396 intergenic CR44344 - chr2R_15_17385001 chr2R_17385001 KN35_1-HE 1169 chr2R 17409674 17409705 chr2R 17409753 17409784 4 79 0.0 6.0 3.0 1.0 110 chr2R 17409674 intron CG30101 - chr2R 17409729 intron CG30101 - chr2R 17409784 exon CG30101 - chr2R_4_17405001 chr2R_17405001 KN35_1-HE 1170 chr2R 17443773 17443802 chr2R 17443850 17443879 11 77 2.5 3.0 2.8 2.9 106 chr2R 17443773 intron EDTP - chr2R 17443826 intron EDTP - chr2R 17443879 intron EDTP - chr2R_11_17440001 chr2R_17440001 KN35_1-HE 1171 chr2R 17470335 17470352 chr2R 17470420 17470437 6 85 2.5 1.5 2.0 2.0 102 chr2R 17470335 intron qkr54B + chr2R 17470386 intron qkr54B + chr2R 17470437 intron qkr54B + chr2R_6_17470001 chr2R_17470001 KN35_1-HE 1172 chr2R 17485918 17485932 chr2R 17490689 17490703 F-element 11 4771 5.0 1.5 3.2 2.6 4785 chr2R 17485918 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17488310 intron NT5E-2 + chr2R 17490703 intron NT5E-2 + chr2R_11_17485001 chr2R_17485001 KN35_1-HE 1173 chr2R 17505995 17506021 chr2R 17506070 17506098 15 77 3.5 5.0 4.2 2.9 103 chr2R 17505995 exon CG43164 + chr2R 17506046 intron CG43164 + chr2R 17506098 intron CG43164 + chr2R_15_17505001 chr2R_17505001 KN35_1-HE 1174 chr2R 17637828 17637859 chr2R 17637909 17637940 13 81 2.5 4.0 3.2 3.1 112 chr2R 17637828 intron CG10936 - chr2R 17637884 intron CG10936 - chr2R 17637940 intron CG10936 - chr2R_13_17635001 chr2R_17635001 KN35_1-HE 1175 chr2R 17661549 17661579 chr2R 17661630 17661657 10 81 4.5 4.5 4.5 1.8 108 chr2R 17661549 intron CCHa1-R - chr2R 17661603 intron CCHa1-R - chr2R 17661657 intron CCHa1-R - chr2R_10_17660001 chr2R_17660001 KN35_1-HE 1176 chr2R 17709987 17710119 chr2R 17710079 17710198 16 85 0.0 0.0 0.0 16.0 211 chr2R 17709987 intron CG6424 - chr2R 17710092 intron CG6424 - chr2R 17710198 intron CG6424 - chr2R_16_17710001 chr2R_17710001 KN35_1-HE 1177 chr2R 17782363 17782384 chr2R 17783567 17783588 pogo 7 1204 4.5 7.0 5.8 1.0 1225 chr2R 17782363 intergenic CG33981 -,fab1 - chr2R 17782976 intergenic not near genes chr2R 17783588 intergenic mir-31a - chr2R_7_17780001 chr2R_17780001 KN35_1-HE 1178 chr2R 17784026 17784056 chr2R 17784268 17784298 pogo 22 242 4.5 8.0 6.2 3.1 272 chr2R 17784026 intergenic mir-31a - chr2R 17784162 intergenic mir-31a - chr2R 17784298 intergenic mir-31a - chr2R_22_17780001 chr2R_17780001 KN35_1-HE 1179 chr2R 17902503 17902534 chr2R 17903101 17903132 25 597 8.0 5.5 6.8 3.2 629 chr2R 17902503 intron Elk + chr2R 17902818 intron Elk + chr2R 17903132 intron Elk + chr2R_25_17900001 chr2R_17900001 KN35_1-HE 1180 chr2R 17950161 17950193 chr2R 17950248 17950280 25 87 4.5 6.5 5.5 3.8 119 chr2R 17950161 intergenic not near genes chr2R 17950220 intergenic not near genes chr2R 17950280 intergenic not near genes chr2R_25_17950001 chr2R_17950001 KN35_1-HE 1181 chr2R 17982923 17982953 chr2R 17983009 17983039 14 86 2.5 6.5 4.5 2.5 116 chr2R 17982923 intron dpr13 - chr2R 17982981 intron dpr13 - chr2R 17983039 intron dpr13 - chr2R_14_17980001 chr2R_17980001 KN35_1-HE 1182 chr2R 17987364 17987378 chr2R 17987443 17987454 13 77 0.0 11.5 5.8 1.9 90 chr2R 17987364 intron dpr13 - chr2R 17987409 intron dpr13 - chr2R 17987454 intron dpr13 - chr2R_13_17985001 chr2R_17985001 KN35_1-HE 1183 chr2R 18045292 18045327 chr2R 18045381 18045416 19 89 5.0 6.0 5.5 2.9 124 chr2R 18045292 intergenic CG5770 - chr2R 18045354 intergenic CG5770 - chr2R 18045416 intergenic CG5770 - chr2R_19_18045001 chr2R_18045001 KN35_1-HE 1184 chr2R 18045666 18045702 chr2R 18046019 18046055 jockey 11 353 3.0 5.5 4.2 2.1 389 chr2R 18045666 intergenic not near genes chr2R 18045860 intergenic not near genes chr2R 18046055 intergenic CG5767 - chr2R_11_18045001 chr2R_18045001 KN35_1-HE 1185 chr2R 18054576 18054613 chr2R 18054659 18054696 21 83 4.5 3.5 4.0 4.2 120 chr2R 18054576 intergenic CR45313 + chr2R 18054636 intergenic CR45313 + chr2R 18054696 intergenic CR45313 + chr2R_21_18050001 chr2R_18050001 KN35_1-HE 1186 chr2R 18085492 18085513 chr2R 18085579 18085600 5 87 3.0 3.0 3.0 1.2 108 chr2R 18085492 intron CG34386 + chr2R 18085546 intron CG34386 + chr2R 18085600 intron CG34386 + chr2R_5_18085001 chr2R_18085001 KN35_1-HE 1187 chr2R 18111689 18111712 chr2R 18115558 18115581 F-element 14 3869 0.0 5.0 2.5 4.0 3892 chr2R 18111689 intergenic not near genes chr2R 18113635 intergenic not near genes chr2R 18115581 intergenic not near genes chr2R_14_18110001 chr2R_18110001 KN35_1-HE 1188 chr2R 18124337 18124373 chr2R 18124415 18124451 25 78 5.0 3.5 4.2 4.8 114 chr2R 18124337 intron stau - chr2R 18124394 intron stau - chr2R 18124451 intron stau - chr2R_25_18120001 chr2R_18120001 KN35_1-HE 1189 chr2R 18127383 18127405 chr2R 18127502 18127525 9 120 2.5 5.5 4.0 1.8 142 chr2R 18127383 intron Spn55B + chr2R 18127454 intron Spn55B + chr2R 18127525 intron Spn55B + chr2R_9_18125001 chr2R_18125001 KN35_1-HE 1190 chr2R 18289440 18289462 chr2R 18289543 18289565 14 102 2.5 6.5 4.5 2.5 125 chr2R 18289440 intron,intron sbb -,CG14502 + chr2R 18289502 intron,intron sbb -,CG14502 + chr2R 18289565 exon,intron sbb -,CG14502 + chr2R_14_18285001 chr2R_18285001 KN35_1-HE 1191 chr2R 18294053 18294067 chr2R 18296872 18296886 6 2819 31.5 38.0 34.8 0.2 2833 chr2R 18294053 intron,exon sbb -,CG14502 + chr2R 18295470 intron,exon sbb -,CG18536 + chr2R 18296886 intron sbb - chr2R_6_18295001 chr2R_18295001 KN35_1-HE 1192 chr2R 18332437 18332463 chr2R 18332516 18332543 17 80 3.5 3.5 3.5 3.8 106 chr2R 18332437 intron sbb - chr2R 18332490 intron sbb - chr2R 18332543 intron sbb - chr2R_17_18330001 chr2R_18330001 KN35_1-HE 1193 chr2R 18358386 18358421 chr2R 18372599 18372634 roo 19 14213 3.5 5.0 4.2 3.7 14248 chr2R 18358386 intergenic not near genes chr2R 18365510 intergenic not near genes chr2R 18372634 intergenic not near genes chr2R_19_18365001 chr2R_18365001 KN35_1-HE 1194 chr2R 18408293 18408313 chr2R 18408408 18408435 6 121 4.0 5.5 4.8 1.0 142 chr2R 18408293 exon GstE8 + chr2R 18408364 exon GstE8 + chr2R 18408435 exon GstE8 + chr2R_6_18405001 chr2R_18405001 KN35_1-HE 1195 chr2R 18507294 18507320 chr2R 18507425 18507451 19 131 0.0 7.5 3.8 4.0 157 chr2R 18507294 intergenic not near genes chr2R 18507372 intergenic not near genes chr2R 18507451 intergenic not near genes chr2R_19_18505001 chr2R_18505001 KN35_1-HE 1196 chr2R 18575794 18575822 chr2R 18581983 18582011 3S18 15 6185 5.5 4.0 4.8 2.6 6217 chr2R 18575794 intron GEFmeso - chr2R 18578902 intron GEFmeso - chr2R 18582011 intron GEFmeso - chr2R_15_18575001 chr2R_18575001 KN35_1-HE 1197 chr2R 18590865 18590901 chr2R 18600018 18600054 roo 12 9152 1.0 2.0 1.5 4.8 9189 chr2R 18590865 intron GEFmeso - chr2R 18595460 intron GEFmeso - chr2R 18600054 intron GEFmeso - chr2R_12_18595001 chr2R_18595001 KN35_1-HE 1198 chr2R 18604857 18604867 chr2R 18605210 18605220 6 353 4.0 2.0 3.0 1.5 363 chr2R 18604857 intron GEFmeso - chr2R 18605038 intron GEFmeso - chr2R 18605220 intron GEFmeso - chr2R_6_18605001 chr2R_18605001 KN35_1-HE 1199 chr2R 18646279 18646309 chr2R 18646371 18646401 14 92 1.5 2.0 1.8 5.0 122 chr2R 18646279 intron SP2637 - chr2R 18646340 intron SP2637 - chr2R 18646401 intron SP2637 - chr2R_14_18645001 chr2R_18645001 KN35_1-HE 1200 chr2R 18686906 18686910 chr2R 18686979 18686998 4 84 0.0 8.0 4.0 0.8 92 chr2R 18686906 intergenic CG44433 -,CG42855 + chr2R 18686952 intergenic CG44433 -,CG42855 + chr2R 18686998 intergenic CG44433 -,CG42855 + chr2R_4_18685001 chr2R_18685001 KN35_1-HE 1201 chr2R 18793499 18793532 chr2R 18793601 18793640 6 103 2.5 1.0 1.8 2.1 141 chr2R 18793499 exon CG15080 + chr2R 18793570 exon CG15080 + chr2R 18793640 exon CG15080 + chr2R_6_18790001 chr2R_18790001 KN35_1-HE 1202 chr2R 18803971 18804006 chr2R 18804052 18804087 11 78 4.0 2.0 3.0 2.8 116 chr2R 18803971 intergenic l(2)08717 - chr2R 18804029 intergenic l(2)08717 - chr2R 18804087 intergenic l(2)08717 - chr2R_11_18800001 chr2R_18800001 KN35_1-HE 1203 chr2R 18808062 18808094 chr2R 18808152 18808184 9 90 0.0 3.0 1.5 3.6 122 chr2R 18808062 intergenic CG15096 - chr2R 18808123 intergenic CG15096 - chr2R 18808184 intergenic CG15096 - chr2R_9_18805001 chr2R_18805001 KN35_1-HE 1204 chr2R 18847609 18847640 chr2R 18847693 18847724 11 81 1.0 4.0 2.5 3.1 115 chr2R 18847609 exon CG15100 - chr2R 18847666 exon CG15100 - chr2R 18847724 exon CG15100 - chr2R_11_18845001 chr2R_18845001 KN35_1-HE 1205 chr2R 18964916 18964950 chr2R 18964993 18965027 24 77 4.5 7.5 6.0 3.4 111 chr2R 18964916 intergenic not near genes chr2R 18964972 intergenic not near genes chr2R 18965027 intergenic not near genes chr2R_24_18960001 chr2R_18960001 KN35_1-HE 1206 chr2R 18995538 18995566 chr2R 18995618 18995646 27 80 2.5 5.5 4.0 5.4 108 chr2R 18995538 intron tn + chr2R 18995592 intron tn + chr2R 18995646 intron tn + chr2R_27_18995001 chr2R_18995001 KN35_1-HE 1207 chr2R 19010747 19010771 chr2R 19010862 19010889 9 115 3.0 3.0 3.0 2.2 142 chr2R 19010747 intergenic not near genes chr2R 19010818 intergenic not near genes chr2R 19010889 intergenic not near genes chr2R_9_19010001 chr2R_19010001 KN35_1-HE 1208 chr2R 19026045 19026061 chr2R 19026186 19026202 9 141 6.5 1.0 3.8 1.9 157 chr2R 19026045 intron 5-HT1B - chr2R 19026124 intron 5-HT1B - chr2R 19026202 intron 5-HT1B - chr2R_9_19025001 chr2R_19025001 KN35_1-HE 1209 chr2R 19026957 19026990 chr2R 19027037 19027070 8 80 4.5 0.0 2.2 2.5 113 chr2R 19026957 intron 5-HT1B - chr2R 19027014 intron 5-HT1B - chr2R 19027070 intron 5-HT1B - chr2R_8_19025001 chr2R_19025001 KN35_1-HE 1210 chr2R 19038882 19038919 chr2R 19039014 19039051 15 132 3.5 0.0 1.8 5.4 169 chr2R 19038882 intergenic not near genes chr2R 19038966 intergenic not near genes chr2R 19039051 intergenic not near genes chr2R_15_19035001 chr2R_19035001 KN35_1-HE 1211 chr2R 19067725 19067755 chr2R 19067802 19067832 9 77 5.0 5.0 5.0 1.5 107 chr2R 19067725 intron 5-HT1A + chr2R 19067778 intron 5-HT1A + chr2R 19067832 intron 5-HT1A + chr2R_9_19065001 chr2R_19065001 KN35_1-HE 1212 chr2R 19141776 19141813 chr2R 19141865 19141902 27 84 4.0 4.0 4.0 5.4 126 chr2R 19141776 intron ena + chr2R 19141839 intron ena + chr2R 19141902 intron ena + chr2R_27_19140001 chr2R_19140001 KN35_1-HE 1213 chr2R 19153942 19153980 chr2R 19154028 19154059 15 78 2.0 4.5 3.2 3.6 117 chr2R 19153942 intron ena + chr2R 19154000 intron ena + chr2R 19154059 intron ena + chr2R_15_19150001 chr2R_19150001 KN35_1-HE 1214 chr2R 19185641 19185671 chr2R 19185852 19185882 9 211 2.5 2.5 2.5 2.6 241 chr2R 19185641 intron hppy + chr2R 19185762 intron hppy + chr2R 19185882 intron hppy + chr2R_9_19185001 chr2R_19185001 KN35_1-HE 1215 chr2R 19221941 19221960 chr2R 19222033 19222037 8 89 0.0 3.0 1.5 3.2 96 chr2R 19221941 intron hppy + chr2R 19221989 intron hppy + chr2R 19222037 intron hppy + chr2R_8_19220001 chr2R_19220001 KN35_1-HE 1216 chr2R 19313959 19313993 chr2R 19314117 19314151 6 158 1.5 3.0 2.2 1.9 192 chr2R 19313959 intron Rgk1 - chr2R 19314055 intron Rgk1 - chr2R 19314151 intron Rgk1 - chr2R_6_19310001 chr2R_19310001 KN35_1-HE 1217 chr2R 19319011 19319034 chr2R 19319375 19319396 13 363 2.0 0.5 1.2 5.9 385 chr2R 19319011 intron Rgk1 - chr2R 19319204 intron Rgk1 - chr2R 19319396 exon Rgk1 - chr2R_13_19315001 chr2R_19315001 KN35_1-HE 1218 chr2R 19348602 19348632 chr2R 19348683 19348713 15 80 1.5 6.0 3.8 3.1 111 chr2R 19348602 intron Rgk1 - chr2R 19348658 intron Rgk1 - chr2R 19348713 intron Rgk1 - chr2R_15_19345001 chr2R_19345001 KN35_1-HE 1219 chr2R 19388499 19388525 chr2R 19388593 19388619 10 94 3.5 5.5 4.5 1.8 120 chr2R 19388499 intron CG10081 + chr2R 19388559 exon CG10081 + chr2R 19388619 exon CG10081 + chr2R_10_19385001 chr2R_19385001 KN35_1-HE 1220 chr2R 19552576 19552578 chr2R 21771380 21771382 4 2218804 27.5 7.5 17.5 0.2 2218806 chr2R 19552576 intron,exon sm -,CG43111 + chr2R 20661979 intron CG13437 + chr2R 21771382 intergenic not near genes chr2R_4_20660001 chr2R_20660001 KN35_1-HE 1221 chr2R 19554481 19554517 chr2R 19555724 19555760 25 1242 3.5 3.5 3.5 5.6 1279 chr2R 19554481 intron sm - chr2R 19555120 intron sm - chr2R 19555760 intron sm - chr2R_25_19555001 chr2R_19555001 KN35_1-HE 1222 chr2R 19640477 19640503 chr2R 19640554 19640580 11 77 5.5 3.0 4.2 2.1 103 chr2R 19640477 intergenic not near genes chr2R 19640528 intergenic not near genes chr2R 19640580 intergenic not near genes chr2R_11_19640001 chr2R_19640001 KN35_1-HE 1223 chr2R 19714706 19714728 chr2R 19714783 19714805 9 77 0.0 0.5 0.2 7.5 99 chr2R 19714706 3` UTR CG8517 + chr2R 19714756 3` UTR CG8517 + chr2R 19714805 3` UTR CG8517 + chr2R_9_19710001 chr2R_19710001 KN35_1-HE 1224 chr2R 19774011 19774042 chr2R 19774125 19774156 10 114 0.0 3.0 1.5 4.0 145 chr2R 19774011 intergenic not near genes chr2R 19774084 intergenic not near genes chr2R 19774156 intergenic not near genes chr2R_10_19770001 chr2R_19770001 KN35_1-HE 1225 chr2R 19776592 19776629 chr2R 19779916 19779953 jockey 12 3324 1.5 2.0 1.8 4.3 3361 chr2R 19776592 intergenic not near genes chr2R 19778272 intergenic not near genes chr2R 19779953 intergenic not near genes chr2R_12_19775001 chr2R_19775001 KN35_1-HE 1226 chr2R 19807673 19807703 chr2R 19807756 19807786 15 83 3.5 4.5 4.0 3.0 113 chr2R 19807673 intergenic not near genes chr2R 19807730 intergenic not near genes chr2R 19807786 intergenic not near genes chr2R_15_19805001 chr2R_19805001 KN35_1-HE 1227 chr2R 19900827 19900852 chr2R 19900922 19900947 19 95 3.5 6.5 5.0 3.2 120 chr2R 19900827 intergenic not near genes chr2R 19900887 intergenic not near genes chr2R 19900947 intergenic not near genes chr2R_19_19900001 chr2R_19900001 KN35_1-HE 1228 chr2R 19914849 19914878 chr2R 19922262 19922291 mdg1 12 7413 4.0 3.5 3.8 2.5 7442 chr2R 19914849 intergenic not near genes chr2R 19918570 intergenic not near genes chr2R 19922291 intergenic not near genes chr2R_12_19915001 chr2R_19915001 KN35_1-HE 1229 chr2R 19957429 19957462 chr2R 19962632 19962664 copia 19 5202 5.0 4.0 4.5 3.5 5235 chr2R 19957429 intergenic CG44623 + chr2R 19960046 intergenic not near genes chr2R 19962664 intergenic not near genes chr2R_19_19960001 chr2R_19960001 KN35_1-HE 1230 chr2R 20029436 20029463 chr2R 20029513 20029540 12 77 2.5 1.5 2.0 4.0 104 chr2R 20029436 intergenic not near genes chr2R 20029488 intergenic not near genes chr2R 20029540 intergenic not near genes chr2R_12_20025001 chr2R_20025001 KN35_1-HE 1231 chr2R 20069249 20069255 chr2R 20071888 20071894 opus 6 2639 4.0 4.0 4.0 1.2 2645 chr2R 20069249 intergenic not near genes chr2R 20070572 intergenic not near genes chr2R 20071894 intergenic not near genes chr2R_6_20070001 chr2R_20070001 KN35_1-HE 1232 chr2R 20079840 20079871 chr2R 20079917 20079954 4 82 0.0 2.5 1.2 1.8 114 chr2R 20079840 intergenic not near genes chr2R 20079897 intergenic not near genes chr2R 20079954 intergenic not near genes chr2R_4_20075001 chr2R_20075001 KN35_1-HE 1233 chr2R 20168343 20168378 chr2R 20168425 20168460 24 82 3.0 3.0 3.0 6.0 117 chr2R 20168343 intergenic not near genes chr2R 20168402 intergenic not near genes chr2R 20168460 intergenic not near genes chr2R_24_20165001 chr2R_20165001 KN35_1-HE 1234 chr2R 20175035 20175064 chr2R 20175132 20175161 10 97 5.5 5.5 5.5 1.5 126 chr2R 20175035 intergenic not near genes chr2R 20175098 intergenic not near genes chr2R 20175161 intergenic not near genes chr2R_10_20175001 chr2R_20175001 KN35_1-HE 1235 chr2R 20226161 20226168 chr2R 20226251 20226258 5 90 6.0 1.0 3.5 1.1 97 chr2R 20226161 intergenic not near genes chr2R 20226210 intergenic not near genes chr2R 20226258 intergenic not near genes chr2R_5_20225001 chr2R_20225001 KN35_1-HE 1236 chr2R 20405081 20405114 chr2R 20405998 20406031 25 917 5.0 6.0 5.5 3.8 950 chr2R 20405081 intergenic not near genes chr2R 20405556 intergenic not near genes chr2R 20406031 intergenic not near genes chr2R_25_20405001 chr2R_20405001 KN35_1-HE 1237 chr2R 20483911 20483945 chr2R 20484285 20484319 13 374 3.5 7.0 5.2 2.1 408 chr2R 20483911 intergenic not near genes chr2R 20484115 intergenic not near genes chr2R 20484319 intergenic not near genes chr2R_13_20480001 chr2R_20480001 KN35_1-HE 1238 chr2R 20510336 20510360 chr2R 20510661 20510685 16 325 5.5 4.5 5.0 2.7 349 chr2R 20510336 intergenic not near genes chr2R 20510510 intergenic not near genes chr2R 20510685 intergenic CR44648 + chr2R_16_20510001 chr2R_20510001 KN35_1-HE 1239 chr2R 20511306 20511319 chr2R 20511394 20511407 9 88 8.0 7.5 7.8 1.0 101 chr2R 20511306 5` UTR CR44648 + chr2R 20511356 5` UTR CR44648 + chr2R 20511407 5` UTR CR44648 + chr2R_9_20510001 chr2R_20510001 KN35_1-HE 1240 chr2R 20541985 20542016 chr2R 20542064 20542095 23 79 2.5 6.5 4.5 4.2 110 chr2R 20541985 intergenic not near genes chr2R 20542040 intergenic not near genes chr2R 20542095 intergenic not near genes chr2R_23_20540001 chr2R_20540001 KN35_1-HE 1241 chr2R 20545830 20545841 chr2R 20545908 20545932 6 89 2.5 7.0 4.8 1.0 102 chr2R 20545830 intergenic not near genes chr2R 20545881 intergenic not near genes chr2R 20545932 intergenic not near genes chr2R_6_20545001 chr2R_20545001 KN35_1-HE 1242 chr2R 20601720 20601751 chr2R 20601806 20601837 13 86 0.0 2.0 1.0 6.5 117 chr2R 20601720 intron bl + chr2R 20601778 intron bl + chr2R 20601837 intron bl + chr2R_13_20600001 chr2R_20600001 KN35_1-HE 1243 chr2R 20604192 20604222 chr2R 20604276 20604307 8 81 1.5 3.5 2.5 2.3 115 chr2R 20604192 intron bl + chr2R 20604250 intron bl + chr2R 20604307 intron bl + chr2R_8_20600001 chr2R_20600001 KN35_1-HE 1244 chr2R 20678217 20678234 chr2R 20678348 20678365 9 131 2.0 4.0 3.0 2.2 148 chr2R 20678217 intergenic not near genes chr2R 20678291 intergenic not near genes chr2R 20678365 intergenic not near genes chr2R_9_20675001 chr2R_20675001 KN35_1-HE 1245 chr2R 20695541 20695552 chr2R 20700168 20700179 7 4627 34.0 25.0 29.5 0.2 4638 chr2R 20695541 intergenic not near genes chr2R 20697860 intergenic not near genes chr2R 20700179 intron dpr + chr2R_7_20695001 chr2R_20695001 KN35_1-HE 1246 chr2R 20739440 20739478 chr2R 20744209 20744247 F-element 19 4769 5.0 5.0 5.0 3.2 4807 chr2R 20739440 intron dpr + chr2R 20741844 intron dpr + chr2R 20744247 intron dpr + chr2R_19_20740001 chr2R_20740001 KN35_1-HE 1247 chr2R 20783310 20783331 chr2R 20788083 20788104 F-element 8 4773 2.0 6.0 4.0 1.6 4794 chr2R 20783310 intergenic not near genes chr2R 20785707 intergenic not near genes chr2R 20788104 intergenic CG43666 - chr2R_8_20785001 chr2R_20785001 KN35_1-HE 1248 chr2R 20811160 20811196 chr2R 20811409 20811445 11 249 3.5 3.5 3.5 2.4 285 chr2R 20811160 intergenic not near genes chr2R 20811302 intergenic not near genes chr2R 20811445 intergenic not near genes chr2R_11_20810001 chr2R_20810001 KN35_1-HE 1249 chr2R 20817447 20817470 chr2R 20817826 20817849 7 379 3.0 1.0 2.0 2.3 402 chr2R 20817447 intergenic not near genes chr2R 20817648 intergenic not near genes chr2R 20817849 intergenic not near genes chr2R_7_20815001 chr2R_20815001 KN35_1-HE 1250 chr2R 20863130 20863137 chr2R 20863217 20863224 4 87 3.0 5.0 4.0 0.8 94 chr2R 20863130 intergenic not near genes chr2R 20863177 intergenic not near genes chr2R 20863224 intergenic not near genes chr2R_4_20860001 chr2R_20860001 KN35_1-HE 1251 chr2R 20928770 20928804 chr2R 20928850 20928884 16 79 5.5 4.0 4.8 2.8 114 chr2R 20928770 intron Rx + chr2R 20928827 intron Rx + chr2R 20928884 intron Rx + chr2R_16_20925001 chr2R_20925001 KN35_1-HE 1252 chr2R 20935831 20935845 chr2R 20935952 20935965 10 121 6.0 3.5 4.8 1.7 134 chr2R 20935831 exon Rx + chr2R 20935898 intron Rx + chr2R 20935965 intron Rx + chr2R_10_20935001 chr2R_20935001 KN35_1-HE 1253 chr2R 20962905 20962939 chr2R 20963004 20963038 23 99 2.5 4.5 3.5 5.1 133 chr2R 20962905 intergenic not near genes chr2R 20962972 intergenic not near genes chr2R 20963038 intergenic not near genes chr2R_23_20960001 chr2R_20960001 KN35_1-HE 1254 chr2R 21063150 21063187 chr2R 21063228 21063265 15 78 5.0 2.5 3.8 3.1 115 chr2R 21063150 exon Cht8 + chr2R 21063208 3` UTR,3` UTR Cht8 +,Cht12 - chr2R 21063265 exon Cht12 - chr2R_15_21060001 chr2R_21060001 KN35_1-HE 1255 chr2R 21103858 21103865 chr2R 21103911 21103949 9 76 3.0 2.5 2.8 2.4 91 chr2R 21103858 intron ktub + chr2R 21103904 intron ktub + chr2R 21103949 intron ktub + chr2R_9_21100001 chr2R_21100001 KN35_1-HE 1256 chr2R 21134981 21135007 chr2R 21135068 21135094 7 87 2.5 4.0 3.2 1.7 113 chr2R 21134981 intron Magi - chr2R 21135038 intron Magi - chr2R 21135094 intron Magi - chr2R_7_21135001 chr2R_21135001 KN35_1-HE 1257 chr2R 21136897 21136940 chr2R 21136982 21137019 6 83 0.0 1.5 0.8 3.3 122 chr2R 21136897 intron Magi - chr2R 21136958 intron Magi - chr2R 21137019 intron Magi - chr2R_6_21135001 chr2R_21135001 KN35_1-HE 1258 chr2R 21151127 21151136 chr2R 21153761 21153770 opus 5 2634 0.0 2.0 1.0 2.5 2643 chr2R 21151127 intron CG30389 - chr2R 21152448 intron CG30389 - chr2R 21153770 intron CG30389 - chr2R_5_21150001 chr2R_21150001 KN35_1-HE 1259 chr2R 21177102 21177120 chr2R 21177314 21177332 4 212 1.0 3.0 2.0 1.3 230 chr2R 21177102 intron Pu + chr2R 21177217 intron Pu + chr2R 21177332 intron Pu + chr2R_4_21175001 chr2R_21175001 KN35_1-HE 1260 chr2R 21188216 21188232 chr2R 21188298 21188314 6 82 5.5 1.0 3.2 1.4 98 chr2R 21188216 exon tud + chr2R 21188265 intron tud + chr2R 21188314 intron tud + chr2R_6_21185001 chr2R_21185001 KN35_1-HE 1261 chr2R 21255117 21255153 chr2R 21255196 21255232 20 79 3.0 2.0 2.5 5.7 115 chr2R 21255117 intergenic Rgk3 + chr2R 21255174 5` UTR Rgk3 + chr2R 21255232 5` UTR Rgk3 + chr2R_20_21255001 chr2R_21255001 KN35_1-HE 1262 chr2R 21258484 21258492 chr2R 21258563 21258571 6 79 0.0 6.5 3.2 1.4 87 chr2R 21258484 intron Rgk3 + chr2R 21258528 intron Rgk3 + chr2R 21258571 intron Rgk3 + chr2R_6_21255001 chr2R_21255001 KN35_1-HE 1263 chr2R 21370515 21370531 chr2R 21370623 21370639 4 108 6.5 3.0 4.8 0.7 124 chr2R 21370515 intron cv-2 - chr2R 21370577 intron cv-2 - chr2R 21370639 intron cv-2 - chr2R_4_21370001 chr2R_21370001 KN35_1-HE 1264 chr2R 21381927 21381938 chr2R 21382015 21382026 6 88 5.5 0.0 2.8 1.6 99 chr2R 21381927 intergenic not near genes chr2R 21381976 intergenic not near genes chr2R 21382026 intergenic not near genes chr2R_6_21380001 chr2R_21380001 KN35_1-HE 1265 chr2R 19086522 19086524 chr2R 21410669 21410671 4 2324147 21.0 9.0 15.0 0.2 2324149 chr2R 19086522 intron 5-HT1A + chr2R 20248596 exon CG9864 - chr2R 21410671 intron Sdc - chr2R_4_20245001 chr2R_20245001 KN35_1-HE 1266 chr2R 21422593 21422614 chr2R 21422673 21422694 13 80 8.0 11.5 9.8 1.2 101 chr2R 21422593 intron Sdc - chr2R 21422644 intron Sdc - chr2R 21422694 intron Sdc - chr2R_13_21420001 chr2R_21420001 KN35_1-HE 1267 chr2R 21425938 21425949 chr2R 21426020 21426031 6 82 7.0 8.5 7.8 0.7 93 chr2R 21425938 intron Sdc - chr2R 21425984 intron Sdc - chr2R 21426031 intron Sdc - chr2R_6_21425001 chr2R_21425001 KN35_1-HE 1268 chr2R 21448949 21448970 chr2R 21449377 21449386 14 427 2.5 2.0 2.2 4.4 437 chr2R 21448949 intron Sdc - chr2R 21449168 intron Sdc - chr2R 21449386 intron Sdc - chr2R_14_21445001 chr2R_21445001 KN35_1-HE 1269 chr2R 21466804 21466838 chr2R 21466907 21466941 12 103 3.0 0.5 1.8 4.3 137 chr2R 21466804 intron Sdc - chr2R 21466872 intron Sdc - chr2R 21466941 intron Sdc - chr2R_12_21465001 chr2R_21465001 KN35_1-HE 1270 chr2R 21467608 21467626 chr2R 21467690 21467708 9 82 3.0 7.5 5.2 1.5 100 chr2R 21467608 intron Sdc - chr2R 21467658 intron Sdc - chr2R 21467708 intron Sdc - chr2R_9_21465001 chr2R_21465001 KN35_1-HE 1271 chr2R 21581936 21581963 chr2R 21582025 21582052 16 89 4.5 3.0 3.8 3.3 116 chr2R 21581936 intergenic not near genes chr2R 21581994 intergenic not near genes chr2R 21582052 intergenic not near genes chr2R_16_21580001 chr2R_21580001 KN35_1-HE 1272 chr2R 21592843 21592854 chr2R 21592926 21592938 6 84 4.0 13.0 8.5 0.6 95 chr2R 21592843 intergenic not near genes chr2R 21592890 intergenic not near genes chr2R 21592938 intergenic not near genes chr2R_6_21590001 chr2R_21590001 KN35_1-HE 1273 chr2R 21609085 21609089 chr2R 21609171 21609175 4 86 5.5 2.0 3.8 0.8 90 chr2R 21609085 intron CG15673 - chr2R 21609130 intron CG15673 - chr2R 21609175 intron CG15673 - chr2R_4_21605001 chr2R_21605001 KN35_1-HE 1274 chr2R 21721576 21721611 chr2R 21721665 21721699 7 89 4.0 0.0 2.0 2.3 123 chr2R 21721576 intron LBR + chr2R 21721638 intron LBR + chr2R 21721699 intron LBR + chr2R_7_21720001 chr2R_21720001 KN35_1-HE 1275 chr2R 21725201 21725218 chr2R 21725278 21725295 7 77 0.0 5.5 2.8 1.8 94 chr2R 21725201 intergenic not near genes chr2R 21725248 intergenic not near genes chr2R 21725295 intergenic not near genes chr2R_7_21725001 chr2R_21725001 KN35_1-HE 1276 chr2R 21728860 21728886 chr2R 21729088 21729114 12 228 3.5 0.5 2.0 4.0 254 chr2R 21728860 intergenic not near genes chr2R 21728987 intergenic not near genes chr2R 21729114 intergenic not near genes chr2R_12_21725001 chr2R_21725001 KN35_1-HE 1277 chr2R 21730102 21730123 chr2R 21730181 21730193 7 78 0.0 7.5 3.8 1.5 91 chr2R 21730102 intergenic not near genes chr2R 21730148 intergenic not near genes chr2R 21730193 intergenic not near genes chr2R_7_21730001 chr2R_21730001 KN35_1-HE 1278 chr2R 21738290 21738307 chr2R 21747437 21747458 roo 5 9153 3.5 6.5 5.0 0.8 9168 chr2R 21738290 intergenic not near genes chr2R 21742874 intergenic not near genes chr2R 21747458 intergenic not near genes chr2R_5_21740001 chr2R_21740001 KN35_1-HE 1279 chr2R 21752139 21752154 chr2R 21752218 21752233 9 79 2.0 5.5 3.8 1.9 94 chr2R 21752139 intergenic not near genes chr2R 21752186 intergenic not near genes chr2R 21752233 intergenic not near genes chr2R_9_21750001 chr2R_21750001 KN35_1-HE 1280 chr2R 21753085 21753117 chr2R 21753570 21753603 roo 23 486 9.5 9.5 9.5 2.2 518 chr2R 21753085 intergenic not near genes chr2R 21753344 intergenic not near genes chr2R 21753603 intergenic not near genes chr2R_23_21750001 chr2R_21750001 KN35_1-HE 1281 chr2R 21809521 21809557 chr2R 21817762 21817798 roo 10 8241 5.5 3.5 4.5 1.8 8277 chr2R 21809521 intergenic not near genes chr2R 21813660 intergenic not near genes chr2R 21817798 intergenic not near genes chr2R_10_21810001 chr2R_21810001 KN35_1-HE 1282 chr2R 21861698 21861734 chr2R 21861775 21861811 17 76 3.5 4.5 4.0 3.4 113 chr2R 21861698 exon CG9294 + chr2R 21861754 exon CG9294 + chr2R 21861811 exon CG9294 + chr2R_17_21860001 chr2R_21860001 KN35_1-HE 1283 chr2R 21892151 21892183 chr2R 21892252 21892284 14 101 5.5 4.5 5.0 2.3 133 chr2R 21892151 intron Fili + chr2R 21892218 intron Fili + chr2R 21892284 intron Fili + chr2R_14_21890001 chr2R_21890001 KN35_1-HE 1284 chr2R 21894889 21894913 chr2R 21894968 21894990 9 76 3.5 3.0 3.2 2.1 101 chr2R 21894889 intron Fili + chr2R 21894940 intron Fili + chr2R 21894990 intron Fili + chr2R_9_21890001 chr2R_21890001 KN35_1-HE 1285 chr2R 21902242 21902267 chr2R 21902347 21902372 15 105 2.5 2.0 2.2 4.7 130 chr2R 21902242 intron Fili + chr2R 21902307 intron Fili + chr2R 21902372 intron Fili + chr2R_15_21900001 chr2R_21900001 KN35_1-HE 1286 chr2R 21906286 21906303 chr2R 21906388 21906405 8 102 1.5 8.0 4.8 1.4 119 chr2R 21906286 intron Fili + chr2R 21906346 intron Fili + chr2R 21906405 intron Fili + chr2R_8_21905001 chr2R_21905001 KN35_1-HE 1287 chr2R 21936886 21936921 chr2R 21936965 21937000 14 79 4.0 5.5 4.8 2.4 114 chr2R 21936886 intron Fili + chr2R 21936943 intron Fili + chr2R 21937000 intron Fili + chr2R_14_21935001 chr2R_21935001 KN35_1-HE 1288 chr2R 21938199 21938226 chr2R 21938282 21938309 19 83 5.5 1.5 3.5 4.2 110 chr2R 21938199 intron Fili + chr2R 21938254 intron Fili + chr2R 21938309 intron Fili + chr2R_19_21935001 chr2R_21935001 KN35_1-HE 1289 chr2R 21966657 21966662 chr2R 21966751 21966759 5 96 0.5 0.0 0.2 4.2 102 chr2R 21966657 intron ppk9 + chr2R 21966708 intron ppk9 + chr2R 21966759 intron ppk9 + chr2R_5_21965001 chr2R_21965001 KN35_1-HE 1290 chr2R 22095039 22095072 chr2R 22095125 22095158 14 86 2.5 6.5 4.5 2.5 119 chr2R 22095039 intron CG11073 - chr2R 22095098 intron CG11073 - chr2R 22095158 intron CG11073 - chr2R_14_22095001 chr2R_22095001 KN35_1-HE 1291 chr2R 22109283 22109315 chr2R 22109361 22109393 8 78 3.5 9.0 6.2 1.1 110 chr2R 22109283 intron Vrp1 - chr2R 22109338 intron Vrp1 - chr2R 22109393 intron Vrp1 - chr2R_8_22105001 chr2R_22105001 KN35_1-HE 1292 chr2R 22111510 22111540 chr2R 22111606 22111656 6 99 4.0 0.0 2.0 2.0 146 chr2R 22111510 intron Vrp1 - chr2R 22111583 intron Vrp1 - chr2R 22111656 intron Vrp1 - chr2R_6_22110001 chr2R_22110001 KN35_1-HE 1293 chr2R 22124315 22124336 chr2R 22124405 22124426 7 90 4.5 7.0 5.8 1.0 111 chr2R 22124315 3` UTR mei-S332 + chr2R 22124370 intergenic mei-S332 +,GM130 - chr2R 22124426 intergenic mei-S332 +,GM130 - chr2R_7_22120001 chr2R_22120001 KN35_1-HE 1294 chr2R 22179221 22179234 chr2R 22179305 22179318 4 84 0.0 4.0 2.0 1.3 97 chr2R 22179221 intron CG11170 - chr2R 22179270 intron CG11170 - chr2R 22179318 intron CG11170 - chr2R_4_22175001 chr2R_22175001 KN35_1-HE 1295 chr2R 22297760 22297796 chr2R 22297853 22297889 18 93 3.0 3.0 3.0 4.5 129 chr2R 22297760 intergenic wdp - chr2R 22297824 intergenic wdp - chr2R 22297889 intergenic wdp - chr2R_18_22295001 chr2R_22295001 KN35_1-HE 1296 chr2R 22349690 22349721 chr2R 22351475 22351506 jockey 27 1784 5.5 9.0 7.2 3.3 1816 chr2R 22349690 intron Liprin-gamma - chr2R 22350598 intron Liprin-gamma - chr2R 22351506 intron Liprin-gamma - chr2R_27_22350001 chr2R_22350001 KN35_1-HE 1297 chr2R 22360379 22360397 chr2R 22360813 22360831 jockey 12 434 13.0 2.0 7.5 1.4 452 chr2R 22360379 intron Liprin-gamma - chr2R 22360605 intron Liprin-gamma - chr2R 22360831 intron Liprin-gamma - chr2R_12_22360001 chr2R_22360001 KN35_1-HE 1298 chr2R 22364204 22364243 chr2R 22364339 22364378 15 135 4.5 5.5 5.0 2.5 174 chr2R 22364204 intron Liprin-gamma - chr2R 22364291 intron Liprin-gamma - chr2R 22364378 intron Liprin-gamma - chr2R_15_22360001 chr2R_22360001 KN35_1-HE 1299 chr2R 22380363 22380395 chr2R 22380455 22380487 15 92 4.0 3.5 3.8 3.1 124 chr2R 22380363 intron wrapper + chr2R 22380425 intron wrapper + chr2R 22380487 intron wrapper + chr2R_15_22380001 chr2R_22380001 KN35_1-HE 1300 chr2R 22433999 22434012 chr2R 22434171 22434184 7 172 6.5 4.0 5.2 1.1 185 chr2R 22433999 intergenic not near genes chr2R 22434092 intergenic not near genes chr2R 22434184 intergenic not near genes chr2R_7_22430001 chr2R_22430001 KN35_1-HE 1301 chr2R 22459496 22459529 chr2R 22459579 22459612 18 83 4.5 6.5 5.5 2.8 116 chr2R 22459496 intron CG10384 + chr2R 22459554 intron CG10384 + chr2R 22459612 intron CG10384 + chr2R_18_22455001 chr2R_22455001 KN35_1-HE 1302 chr2R 22460395 22460405 chr2R 22460475 22460485 9 80 4.0 11.0 7.5 1.1 90 chr2R 22460395 intron CG10384 + chr2R 22460440 intron CG10384 + chr2R 22460485 intron CG10384 + chr2R_9_22460001 chr2R_22460001 KN35_1-HE 1303 chr2R 22465314 22465346 chr2R 22465514 22465546 BS 17 200 7.5 0.5 4.0 3.4 232 chr2R 22465314 intron CG10384 + chr2R 22465430 intron CG10384 + chr2R 22465546 intron CG10384 + chr2R_17_22465001 chr2R_22465001 KN35_1-HE 1304 chr2R 22505812 22505841 chr2R 22505890 22505914 13 78 2.0 6.0 4.0 2.6 102 chr2R 22505812 intron px - chr2R 22505863 intron px - chr2R 22505914 intron px - chr2R_13_22505001 chr2R_22505001 KN35_1-HE 1305 chr2R 22525747 22525786 chr2R 22529303 22529315 jockey 17 3553 1.5 4.0 2.8 4.5 3568 chr2R 22525747 intron px - chr2R 22527531 intron px - chr2R 22529315 intron px - chr2R_17_22525001 chr2R_22525001 KN35_1-HE 1306 chr2R 22549365 22549384 chr2R 22549448 22549467 10 83 2.5 9.0 5.8 1.5 102 chr2R 22549365 intron px - chr2R 22549416 intron px - chr2R 22549467 intron px - chr2R_10_22545001 chr2R_22545001 KN35_1-HE 1307 chr2R 22571139 22571166 chr2R 22571223 22571250 20 83 4.5 2.5 3.5 4.4 111 chr2R 22571139 intron dnr1 - chr2R 22571194 intron dnr1 - chr2R 22571250 intron dnr1 - chr2R_20_22570001 chr2R_22570001 KN35_1-HE 1308 chr2R 22680617 22680633 chr2R 22680696 22680712 10 79 5.0 0.0 2.5 2.9 95 chr2R 22680617 intergenic not near genes chr2R 22680664 intergenic not near genes chr2R 22680712 intergenic not near genes chr2R_10_22680001 chr2R_22680001 KN35_1-HE 1309 chr2R 22723230 22723254 chr2R 22723307 22723331 11 77 6.5 5.0 5.8 1.6 101 chr2R 22723230 intron jbug - chr2R 22723280 intron jbug - chr2R 22723331 intron jbug - chr2R_11_22720001 chr2R_22720001 KN35_1-HE 1310 chr2R 22729462 22729466 chr2R 22729671 22729675 INE-1 5 209 3.5 3.5 3.5 1.1 213 chr2R 22729462 intron jbug - chr2R 22729568 intron jbug - chr2R 22729675 intron jbug - chr2R_5_22725001 chr2R_22725001 KN35_1-HE 1311 chr2R 22774959 22775001 chr2R 22775379 22775421 jockey 27 420 7.0 7.5 7.2 3.3 462 chr2R 22774959 intron CG42260 - chr2R 22775190 intron CG42260 - chr2R 22775421 intron CG42260 - chr2R_27_22775001 chr2R_22775001 KN35_1-HE 1312 chr2R 22785726 22785760 chr2R 22785805 22785839 20 79 3.0 5.0 4.0 4.0 113 chr2R 22785726 intron CG42260 - chr2R 22785782 intron CG42260 - chr2R 22785839 intron CG42260 - chr2R_20_22785001 chr2R_22785001 KN35_1-HE 1313 chr2R 22834452 22834457 chr2R 22836591 22836596 6 2139 11.5 33.5 22.5 0.3 2144 chr2R 22834452 exon CG30265 + chr2R 22835524 exon CG12490 + chr2R 22836596 3` UTR CG12490 + chr2R_6_22835001 chr2R_22835001 KN35_1-HE 1314 chr2R 22839495 22839512 chr2R 22839575 22839592 12 80 9.5 0.0 4.8 2.1 97 chr2R 22839495 intergenic CG9825 + chr2R 22839544 intergenic CG9825 + chr2R 22839592 intergenic CG9825 + chr2R_12_22835001 chr2R_22835001 KN35_1-HE 1315 chr2R 22905036 22905049 chr2R 22905172 22905185 6 136 6.0 0.0 3.0 1.5 149 chr2R 22905036 intron nahoda + chr2R 22905110 intron nahoda + chr2R 22905185 intron nahoda + chr2R_6_22905001 chr2R_22905001 KN35_1-HE 1316 chr2R 22909524 22909549 chr2R 22909763 22909788 9 237 3.0 3.5 3.2 2.1 264 chr2R 22909524 intron nahoda + chr2R 22909656 intron nahoda + chr2R 22909788 intron nahoda + chr2R_9_22905001 chr2R_22905001 KN35_1-HE 1317 chr2R 22970698 22970713 chr2R 22972139 22972154 8 1441 3.5 5.5 4.5 1.5 1456 chr2R 22970698 intergenic not near genes chr2R 22971426 intergenic not near genes chr2R 22972154 intergenic not near genes chr2R_8_22970001 chr2R_22970001 KN35_1-HE 1318 chr2R 22996189 22996203 chr2R 22996269 22996283 8 80 4.5 6.0 5.2 1.3 94 chr2R 22996189 intron,intron twi +,CG9896 - chr2R 22996236 intron,intron twi +,CG9896 - chr2R 22996283 intron,intron twi +,CG9896 - chr2R_8_22995001 chr2R_22995001 KN35_1-HE 1319 chr2R 23041198 23041202 chr2R 23041305 23041309 4 107 15.5 9.5 12.5 0.3 111 chr2R 23041198 intron,intron twi +,CG42741 - chr2R 23041254 intron,intron twi +,CG42741 - chr2R 23041309 intron,intron twi +,CG42741 - chr2R_4_23040001 chr2R_23040001 KN35_1-HE 1320 chr2R 23052649 23052683 chr2R 23052726 23052760 11 77 2.5 4.5 3.5 2.4 111 chr2R 23052649 intergenic not near genes chr2R 23052704 intergenic not near genes chr2R 23052760 intergenic not near genes chr2R_11_23050001 chr2R_23050001 KN35_1-HE 1321 chr2R 23061773 23061791 chr2R 23061868 23061886 10 95 2.0 5.5 3.8 2.1 113 chr2R 23061773 3` UTR l(2)06496 - chr2R 23061830 3` UTR l(2)06496 - chr2R 23061886 3` UTR l(2)06496 - chr2R_10_23060001 chr2R_23060001 KN35_1-HE 1322 chr2R 23104517 23104548 chr2R 23104600 23104631 9 82 3.0 3.5 3.2 2.1 114 chr2R 23104517 exon Gr59d - chr2R 23104574 exon Gr59d - chr2R 23104631 exon Gr59d - chr2R_9_23100001 chr2R_23100001 KN35_1-HE 1323 chr2R 23115640 23115670 chr2R 23116044 23116074 10 404 7.5 7.0 7.2 1.2 434 chr2R 23115640 intergenic not near genes chr2R 23115857 intergenic not near genes chr2R 23116074 intergenic not near genes chr2R_10_23115001 chr2R_23115001 KN35_1-HE 1324 chr2R 23123833 23123837 chr2R 23123917 23123921 5 84 2.0 4.0 3.0 1.2 88 chr2R 23123833 intergenic Klp59C - chr2R 23123877 intergenic Klp59C - chr2R 23123921 intergenic Klp59C - chr2R_5_23120001 chr2R_23120001 KN35_1-HE 1325 chr2R 23138445 23138456 chr2R 23138531 23138542 4 86 8.0 0.5 4.2 0.8 97 chr2R 23138445 intergenic CG30192 + chr2R 23138494 intergenic CG30192 + chr2R 23138542 intergenic CG30192 + chr2R_4_23135001 chr2R_23135001 KN35_1-HE 1326 chr2R 23180392 23180423 chr2R 23180653 23180683 22 261 3.0 2.0 2.5 6.3 291 chr2R 23180392 intron CG34371 - chr2R 23180538 intron CG34371 - chr2R 23180683 intron CG34371 - chr2R_22_23180001 chr2R_23180001 KN35_1-HE 1327 chr2R 23186570 23186601 chr2R 23186649 23186680 18 79 9.0 7.5 8.2 2.0 110 chr2R 23186570 intron CG34371 - chr2R 23186625 intron CG34371 - chr2R 23186680 intron CG34371 - chr2R_18_23185001 chr2R_23185001 KN35_1-HE 1328 chr2R 23188559 23188587 chr2R 23188638 23188666 10 79 2.0 8.5 5.2 1.6 107 chr2R 23188559 intron CG34371 - chr2R 23188612 intron CG34371 - chr2R 23188666 intron CG34371 - chr2R_10_23185001 chr2R_23185001 KN35_1-HE 1329 chr2R 23265909 23265929 chr2R 23266358 23266360 10 447 2.5 4.5 3.5 2.2 451 chr2R 23265909 intergenic CG12782 - chr2R 23266134 intergenic not near genes chr2R 23266360 intergenic not near genes chr2R_10_23265001 chr2R_23265001 KN35_1-HE 1330 chr2R 23303855 23303871 chr2R 23304080 23304103 8 228 5.5 6.5 6.0 1.1 248 chr2R 23303855 intergenic not near genes chr2R 23303979 intergenic not near genes chr2R 23304103 intergenic not near genes chr2R_8_23300001 chr2R_23300001 KN35_1-HE 1331 chr2R 23346470 23346483 chr2R 23346555 23346568 4 85 3.5 10.5 7.0 0.5 98 chr2R 23346470 5` UTR CG3502 - chr2R 23346519 intron CG3502 - chr2R 23346568 intron CG3502 - chr2R_4_23345001 chr2R_23345001 KN35_1-HE 1332 chr2R 23402638 23402642 chr2R 23407715 23407719 flea 5 5077 0.0 10.5 5.2 0.8 5081 chr2R 23402638 intergenic CG3520 - chr2R 23405178 intergenic not near genes chr2R 23407719 intergenic not near genes chr2R_5_23405001 chr2R_23405001 KN35_1-HE 1333 chr2R 23411055 23411079 chr2R 23411138 23411162 6 83 2.0 0.0 1.0 3.0 107 chr2R 23411055 intergenic not near genes chr2R 23411108 intergenic not near genes chr2R 23411162 intergenic not near genes chr2R_6_23410001 chr2R_23410001 KN35_1-HE 1334 chr2R 23497478 23497493 chr2R 23497562 23497577 10 84 3.5 0.0 1.8 3.6 99 chr2R 23497478 intergenic not near genes chr2R 23497528 intergenic not near genes chr2R 23497577 intergenic not near genes chr2R_10_23495001 chr2R_23495001 KN35_1-HE 1335 chr2R 23529577 23529606 chr2R 23537153 23537157 412 5 7572 3.0 2.5 2.8 1.3 7580 chr2R 23529577 intron bw - chr2R 23533367 intron bw - chr2R 23537157 exon bw - chr2R_5_23530001 chr2R_23530001 KN35_1-HE 1336 chr2R 23545959 23545992 chr2R 23546050 23546059 6 86 1.5 3.5 2.5 1.7 100 chr2R 23545959 exon wmd - chr2R 23546009 intron wmd - chr2R 23546059 intron wmd - chr2R_6_23545001 chr2R_23545001 KN35_1-HE 1337 chr2R 23653961 23653985 chr2R 23654079 23654103 16 118 7.0 7.5 7.2 2.0 142 chr2R 23653961 3` UTR retn + chr2R 23654032 3` UTR retn + chr2R 23654103 3` UTR retn + chr2R_16_23650001 chr2R_23650001 KN35_1-HE 1338 chr2R 23784472 23784507 chr2R 23784551 23784586 14 78 3.0 6.5 4.8 2.4 114 chr2R 23784472 intron CG9850 - chr2R 23784529 intron CG9850 - chr2R 23784586 intron CG9850 - chr2R_14_23780001 chr2R_23780001 KN35_1-HE 1339 chr2R 23865831 23865967 chr2R 23865914 23866046 25 81 2.0 2.0 2.0 8.3 215 chr2R 23865831 intron CG5569 + chr2R 23865938 intron CG5569 + chr2R 23866046 intron CG5569 + chr2R_25_23865001 chr2R_23865001 KN35_1-HE 1340 chr2R 23877727 23877751 chr2R 23878199 23878223 297 4 472 5.5 2.0 3.8 0.8 496 chr2R 23877727 intergenic ken +,TM4SF + chr2R 23877975 intergenic TM4SF + chr2R 23878223 5` UTR TM4SF + chr2R_4_23875001 chr2R_23875001 KN35_1-HE 1341 chr2R 23914297 23914325 chr2R 23921922 23921950 412 11 7625 3.0 1.5 2.2 3.4 7653 chr2R 23914297 exon kcc + chr2R 23918124 intron kcc + chr2R 23921950 intron kcc + chr2R_11_23915001 chr2R_23915001 KN35_1-HE 1342 chr2R 24078827 24078861 chr2R 24079172 24079206 14 344 5.5 2.5 4.0 2.8 379 chr2R 24078827 exon CG10339 - chr2R 24079016 exon CG10339 - chr2R 24079206 exon CG10339 - chr2R_14_24075001 chr2R_24075001 KN35_1-HE 1343 chr2R 24147065 24147096 chr2R 24154644 24154664 412 19 7578 3.0 6.5 4.8 3.3 7599 chr2R 24147065 intron Dat + chr2R 24150864 intron Dat + chr2R 24154664 intron Dat + chr2R_19_24150001 chr2R_24150001 KN35_1-HE 1344 chr2R 24177235 24177261 chr2R 24184720 24184746 412 14 7485 4.5 2.0 3.2 3.3 7511 chr2R 24177235 3` UTR Nop60B + chr2R 24180990 intron Nop60B + chr2R 24184746 3` UTR Nop60B + chr2R_14_24180001 chr2R_24180001 KN35_1-HE 1345 chr2R 24303525 24303536 chr2R 24303605 24303616 7 80 8.0 7.5 7.8 0.8 91 chr2R 24303525 intergenic not near genes chr2R 24303570 intergenic not near genes chr2R 24303616 intergenic not near genes chr2R_7_24300001 chr2R_24300001 KN35_1-HE 1346 chr2R 24317893 24317920 chr2R 24318012 24318039 10 119 1.0 3.5 2.2 3.1 146 chr2R 24317893 intergenic not near genes chr2R 24317966 intergenic not near genes chr2R 24318039 intergenic not near genes chr2R_10_24315001 chr2R_24315001 KN35_1-HE 1347 chr2R 24353430 24353457 chr2R 24361793 24361820 roo 4 8363 1.0 2.5 1.8 1.4 8390 chr2R 24353430 intron,intron bs +,CR44811 - chr2R 24357625 intron,intron bs +,CR44811 - chr2R 24361820 intron,intron bs +,CR44811 - chr2R_4_24355001 chr2R_24355001 KN35_1-HE 1348 chr2R 24388488 24388506 chr2R 24388571 24388589 10 83 5.0 4.0 4.5 1.8 101 chr2R 24388488 intron mAChR-A - chr2R 24388538 intron mAChR-A - chr2R 24388589 intron mAChR-A - chr2R_10_24385001 chr2R_24385001 KN35_1-HE 1349 chr2R 24430805 24430839 chr2R 24430887 24430921 18 82 6.5 4.0 5.2 2.9 116 chr2R 24430805 intergenic CG15873 - chr2R 24430863 intergenic CG15873 -,Pgam5-2 - chr2R 24430921 intergenic CG15873 -,Pgam5-2 - chr2R_18_24430001 chr2R_24430001 KN35_1-HE 1350 chr2R 24513807 24513843 chr2R 24513887 24513923 14 80 3.0 5.0 4.0 2.8 116 chr2R 24513807 intron Letm1 - chr2R 24513865 intron Letm1 - chr2R 24513923 intron Letm1 - chr2R_14_24510001 chr2R_24510001 KN35_1-HE 1351 chr2R 24627070 24627368 chr2R 24627205 24627447 17 125 5.5 5.5 5.5 2.6 377 chr2R 24627070 intron CG13594 - chr2R 24627258 intron CG13594 - chr2R 24627447 intron CG13594 - chr2R_17_24625001 chr2R_24625001 KN35_1-HE 1352 chr2R 24627373 24627403 chr2R 24627452 24627481 6 78 0.5 7.0 3.8 1.2 108 chr2R 24627373 intron CG13594 - chr2R 24627427 intron CG13594 - chr2R 24627481 intron CG13594 - chr2R_6_24625001 chr2R_24625001 KN35_1-HE 1353 chr2R 24647604 24647617 chr2R 24655147 24655175 412 10 7556 3.5 4.5 4.0 2.0 7571 chr2R 24647604 intergenic not near genes chr2R 24651390 intergenic not near genes chr2R 24655175 intergenic not near genes chr2R_10_24650001 chr2R_24650001 KN35_1-HE 1354 chr2R 24722363 24722394 chr2R 24722446 24722477 10 83 4.5 2.5 3.5 2.2 114 chr2R 24722363 intron Mid1 - chr2R 24722420 intron Mid1 - chr2R 24722477 intron Mid1 - chr2R_10_24720001 chr2R_24720001 KN35_1-HE 1355 chr2R 24727883 24727918 chr2R 24735392 24735415 mdg1 9 7508 1.5 3.0 2.2 2.8 7532 chr2R 24727883 intron Mid1 - chr2R 24731649 intron Mid1 - chr2R 24735415 intron Mid1 - chr2R_9_24730001 chr2R_24730001 KN35_1-HE 1356 chr2R 24775339 24775370 chr2R 24775432 24775463 9 93 1.5 3.5 2.5 2.6 124 chr2R 24775339 intergenic Eps-15 -,egg -,CR44067 + chr2R 24775401 intergenic egg -,Eps-15 -,CR44067 + chr2R 24775463 intergenic egg -,Eps-15 -,CR44067 + chr2R_9_24775001 chr2R_24775001 KN35_1-HE 1357 chr2R 24790787 24790810 chr2R 24790915 24790938 10 127 3.5 4.5 4.0 2.0 151 chr2R 24790787 intron Reg-5 - chr2R 24790862 intron Reg-5 - chr2R 24790938 intron Reg-5 - chr2R_10_24790001 chr2R_24790001 KN35_1-HE 1358 chr2R 24840858 24840889 chr2R 24840935 24840966 12 77 5.0 4.0 4.5 2.2 108 chr2R 24840858 intergenic not near genes chr2R 24840912 intergenic not near genes chr2R 24840966 intergenic not near genes chr2R_12_24840001 chr2R_24840001 KN35_1-HE 1359 chr2R 24960258 24960292 chr2R 24960342 24960376 15 84 2.0 4.0 3.0 3.8 118 chr2R 24960258 3` UTR CG2765 - chr2R 24960317 3` UTR CG2765 - chr2R 24960376 3` UTR CG2765 - chr2R_15_24960001 chr2R_24960001 KN35_1-HE 1360 chr2R 25022644 25022662 chr2R 25022729 25022747 13 85 5.0 7.0 6.0 1.9 103 chr2R 25022644 intron uzip + chr2R 25022696 intron uzip + chr2R 25022747 intron uzip + chr2R_13_25020001 chr2R_25020001 KN35_1-HE 1361 chr2R 25080304 25080339 chr2R 25080675 25080710 19 371 4.0 5.0 4.5 3.5 406 chr2R 25080304 intron gol - chr2R 25080507 intron gol - chr2R 25080710 intron gol - chr2R_19_25080001 chr2R_25080001 KN35_1-HE 1362 chr2R 25081605 25081639 chr2R 25082702 25082736 15 1097 2.5 3.5 3.0 3.8 1131 chr2R 25081605 intron gol - chr2R 25082170 intron gol - chr2R 25082736 intron gol - chr2R_15_25080001 chr2R_25080001 KN35_1-HE 1363 chr2R 25101273 25101306 chr2R 25101376 25101408 16 103 6.0 5.0 5.5 2.5 135 chr2R 25101273 intron lov - chr2R 25101340 intron lov - chr2R 25101408 intron lov - chr2R_16_25100001 chr2R_25100001 KN35_1-HE 1364 chr2R 25124583 25124616 chr2R 25124671 25124704 10 85 5.0 4.0 4.5 1.8 121 chr2R 25124583 intron lov - chr2R 25124644 intron lov - chr2R 25124704 intron lov - chr2R_10_25120001 chr2R_25120001 KN35_1-HE 1365 chr2R 25141647 25141682 chr2R 25159338 25159373 roo 14 17691 4.0 10.5 7.2 1.7 17726 chr2R 25141647 intergenic not near genes chr2R 25150510 intergenic not near genes chr2R 25159373 intergenic not near genes chr2R_14_25150001 chr2R_25150001 KN35_1-HE 1366 chr2R 25253444 25253468 chr2R 25253521 25253545 5 77 1.5 0.5 1.0 2.5 101 chr2R 25253444 intron,intron CG9380 -,CG30428 + chr2R 25253494 intron,intron CG9380 -,CG30428 + chr2R 25253545 intron,intron CG9380 -,CG30428 + chr2R_5_25250001 chr2R_25250001 KN35_1-HE 1367 chr3L 110208 110244 chr3L 119376 119412 roo 11 9168 5.5 4.0 4.8 1.9 9204 chr3L 110208 intergenic not near genes chr3L 114810 intergenic not near genes chr3L 119412 intergenic not near genes chr3L_11_110001 chr3L_110001 KN35_1-HE 1368 chr3L 136560 136594 chr3L 138934 138968 17 2376 31.0 26.0 28.5 0.6 2408 chr3L 136560 intron Pdk1 + chr3L 137764 intron Pdk1 + chr3L 138968 intron Pdk1 + chr3L_17_135001 chr3L_135001 KN35_1-HE 1369 chr3L 230473 230497 chr3L 230554 230578 6 81 2.5 3.5 3.0 1.5 105 chr3L 230473 5` UTR CR42862 + chr3L 230526 5` UTR CR42862 + chr3L 230578 5` UTR CR42862 + chr3L_6_230001 chr3L_230001 KN35_1-HE 1370 chr3L 402691 402718 chr3L 409745 409772 297 20 7054 9.0 13.0 11.0 1.7 7081 chr3L 402691 intergenic not near genes chr3L 406232 intergenic not near genes chr3L 409772 intergenic not near genes chr3L_20_405001 chr3L_405001 KN35_1-HE 1371 chr3L 477888 477901 chr3L 477972 477985 8 84 9.5 0.0 4.8 1.4 97 chr3L 477888 intron klar - chr3L 477936 intron klar - chr3L 477985 intron klar - chr3L_8_475001 chr3L_475001 KN35_1-HE 1372 chr3L 491638 491670 chr3L 491721 491753 16 83 8.5 3.5 6.0 2.3 115 chr3L 491638 intron klar - chr3L 491696 intron klar - chr3L 491753 intron klar - chr3L_16_490001 chr3L_490001 KN35_1-HE 1373 chr3L 494594 494619 chr3L 494676 494702 12 83 5.0 0.0 2.5 3.4 108 chr3L 494594 intron klar - chr3L 494648 intron klar - chr3L 494702 intron klar - chr3L_12_490001 chr3L_490001 KN35_1-HE 1374 chr3L 514277 514295 chr3L 514354 514373 15 78 7.5 4.5 6.0 2.1 96 chr3L 514277 intron klar - chr3L 514325 intron klar - chr3L 514373 intron klar - chr3L_15_510001 chr3L_510001 KN35_1-HE 1375 chr3L 524741 524777 chr3L 524825 524860 7 83 0.5 2.0 1.2 3.2 119 chr3L 524741 intron klar - chr3L 524800 intron klar - chr3L 524860 intron klar - chr3L_7_520001 chr3L_520001 KN35_1-HE 1376 chr3L 586385 586402 chr3L 586467 586484 5 82 3.5 4.5 4.0 1.0 99 chr3L 586385 intron Kah - chr3L 586434 intron Kah - chr3L 586484 intron Kah - chr3L_5_585001 chr3L_585001 KN35_1-HE 1377 chr3L 665863 665874 chr3L 665947 665958 6 84 5.0 3.5 4.2 1.2 95 chr3L 665863 intergenic not near genes chr3L 665910 intergenic not near genes chr3L 665958 intergenic not near genes chr3L_6_665001 chr3L_665001 KN35_1-HE 1378 chr3L 695646 695676 chr3L 695771 695801 9 125 3.0 3.5 3.2 2.1 155 chr3L 695646 intron CG13894 - chr3L 695724 intron CG13894 - chr3L 695801 intron CG13894 - chr3L_9_695001 chr3L_695001 KN35_1-HE 1379 chr3L 705895 705916 chr3L 705992 706013 8 97 5.0 2.0 3.5 1.8 118 chr3L 705895 intergenic CG13895 -,CR44514 + chr3L 705954 3` UTR CG13895 - chr3L 706013 3` UTR CG13895 - chr3L_8_705001 chr3L_705001 KN35_1-HE 1380 chr3L 717910 717914 chr3L 717987 718004 6 88 0.0 3.0 1.5 2.4 94 chr3L 717910 intergenic not near genes chr3L 717957 intergenic not near genes chr3L 718004 intergenic not near genes chr3L_6_715001 chr3L_715001 KN35_1-HE 1381 chr3L 746494 746526 chr3L 746580 746612 12 86 0.0 3.5 1.8 4.3 118 chr3L 746494 intron hng3 - chr3L 746553 intron hng3 - chr3L 746612 intron hng3 - chr3L_12_745001 chr3L_745001 KN35_1-HE 1382 chr3L 780333 780346 chr3L 780411 780424 11 78 3.0 8.5 5.8 1.6 91 chr3L 780333 intergenic not near genes chr3L 780378 intergenic not near genes chr3L 780424 intergenic not near genes chr3L_11_780001 chr3L_780001 KN35_1-HE 1383 chr3L 805757 805770 chr3L 805938 805956 6 185 3.5 4.5 4.0 1.2 199 chr3L 805757 intergenic not near genes chr3L 805856 intergenic not near genes chr3L 805956 intergenic not near genes chr3L_6_805001 chr3L_805001 KN35_1-HE 1384 chr3L 857996 858031 chr3L 866478 866513 Tirant 12 8480 6.5 3.5 5.0 2.0 8517 chr3L 857996 intergenic not near genes chr3L 862254 intergenic not near genes chr3L 866513 5` UTR CG12502 + chr3L_12_860001 chr3L_860001 KN35_1-HE 1385 chr3L 925174 925210 chr3L 932601 932637 mdg1 11 7427 2.0 5.0 3.5 2.4 7463 chr3L 925174 intron Glut1 + chr3L 928906 intron Glut1 + chr3L 932637 intron Glut1 + chr3L_11_925001 chr3L_925001 KN35_1-HE 1386 chr3L 939774 939797 chr3L 940896 940919 jockey 9 1122 4.0 9.0 6.5 1.2 1145 chr3L 939774 intron Glut1 + chr3L 940346 intron Glut1 + chr3L 940919 intron Glut1 + chr3L_9_940001 chr3L_940001 KN35_1-HE 1387 chr3L 942314 942350 chr3L 942396 942432 15 82 4.0 4.0 4.0 3.0 118 chr3L 942314 intron Glut1 + chr3L 942373 intron Glut1 + chr3L 942432 intron Glut1 + chr3L_15_940001 chr3L_940001 KN35_1-HE 1388 chr3L 942939 942959 chr3L 943026 943040 5 84 5.5 3.0 4.2 1.0 101 chr3L 942939 intron Glut1 + chr3L 942990 intron Glut1 + chr3L 943040 intron Glut1 + chr3L_5_940001 chr3L_940001 KN35_1-HE 1389 chr3L 1047378 1047385 chr3L 1055163 1055194 412 10 7794 1.0 2.5 1.8 3.6 7816 chr3L 1047378 intron bab1 - chr3L 1051286 intron bab1 - chr3L 1055194 intron bab1 - chr3L_10_1050001 chr3L_1050001 KN35_1-HE 1390 chr3L 1056279 1056304 chr3L 1056367 1056392 11 88 1.5 3.5 2.5 3.1 113 chr3L 1056279 intron bab1 - chr3L 1056336 intron bab1 - chr3L 1056392 intron bab1 - chr3L_11_1055001 chr3L_1055001 KN35_1-HE 1391 chr3L 1067837 1067849 chr3L 1067927 1067935 6 89 4.5 2.0 3.2 1.4 98 chr3L 1067837 intron bab1 - chr3L 1067886 intron bab1 - chr3L 1067935 intron bab1 - chr3L_6_1065001 chr3L_1065001 KN35_1-HE 1392 chr3L 1103994 1104014 chr3L 1104186 1104206 10 192 7.5 7.0 7.2 1.2 212 chr3L 1103994 intergenic not near genes chr3L 1104100 intergenic not near genes chr3L 1104206 intergenic not near genes chr3L_10_1100001 chr3L_1100001 KN35_1-HE 1393 chr3L 1109631 1109666 chr3L 1109720 1109755 25 89 7.0 4.0 5.5 3.8 124 chr3L 1109631 intergenic not near genes chr3L 1109693 intergenic not near genes chr3L 1109755 intergenic not near genes chr3L_25_1105001 chr3L_1105001 KN35_1-HE 1394 chr3L 1143948 1143953 chr3L 1144047 1144052 6 99 0.0 11.0 5.5 0.9 104 chr3L 1143948 intron bab2 - chr3L 1144000 intron bab2 - chr3L 1144052 intron bab2 - chr3L_6_1140001 chr3L_1140001 KN35_1-HE 1395 chr3L 1145245 1145265 chr3L 1145325 1145345 6 80 4.0 4.5 4.2 1.2 100 chr3L 1145245 intron bab2 - chr3L 1145295 intron bab2 - chr3L 1145345 intron bab2 - chr3L_6_1145001 chr3L_1145001 KN35_1-HE 1396 chr3L 1154128 1154162 chr3L 1163279 1163313 roo 13 9151 3.0 6.5 4.8 2.2 9185 chr3L 1154128 intron bab2 - chr3L 1158720 intron bab2 - chr3L 1163313 intron bab2 - chr3L_13_1155001 chr3L_1155001 KN35_1-HE 1397 chr3L 1187619 1187647 chr3L 1187709 1187729 7 89 0.0 3.5 1.8 2.5 110 chr3L 1187619 intergenic not near genes chr3L 1187674 intergenic not near genes chr3L 1187729 intergenic not near genes chr3L_7_1185001 chr3L_1185001 KN35_1-HE 1398 chr3L 1219593 1219621 chr3L 1227327 1227355 412 6 7734 5.0 2.5 3.8 1.2 7762 chr3L 1219593 intron mwh + chr3L 1223474 intron mwh + chr3L 1227355 intron mwh + chr3L_6_1220001 chr3L_1220001 KN35_1-HE 1399 chr3L 1260145 1260162 chr3L 1260226 1260243 6 81 5.0 5.0 5.0 1.0 98 chr3L 1260145 intron CG9134 + chr3L 1260194 intron CG9134 + chr3L 1260243 intron CG9134 + chr3L_6_1260001 chr3L_1260001 KN35_1-HE 1400 chr3L 1310981 1311004 chr3L 1315840 1315863 9 4859 25.0 22.0 23.5 0.4 4882 chr3L 1310981 exon CG2469 + chr3L 1313422 intergenic CG9186 -,CG9153 + chr3L 1315863 exon CG9153 + chr3L_9_1310001 chr3L_1310001 KN35_1-HE 1401 chr3L 1333168 1333190 chr3L 1333252 1333274 4 84 3.0 0.0 1.5 1.6 106 chr3L 1333168 intergenic msd5 -,CG2211 - chr3L 1333221 intergenic CG2211 -,msd5 - chr3L 1333274 3` UTR CG2211 - chr3L_4_1330001 chr3L_1330001 KN35_1-HE 1402 chr3L 1396738 1396759 chr3L 1396823 1396844 18 85 4.5 4.5 4.5 3.3 106 chr3L 1396738 intron Ptp61F - chr3L 1396791 intron Ptp61F - chr3L 1396844 intron Ptp61F - chr3L_18_1395001 chr3L_1395001 KN35_1-HE 1403 chr3L 1415772 1415804 chr3L 1415855 1415887 15 83 5.0 6.5 5.8 2.2 115 chr3L 1415772 intron Ptp61F - chr3L 1415830 intron Ptp61F - chr3L 1415887 intron Ptp61F - chr3L_15_1415001 chr3L_1415001 KN35_1-HE 1404 chr3L 1434244 1434261 chr3L 1434334 1434351 14 90 3.5 5.0 4.2 2.7 107 chr3L 1434244 intron Ptp61F - chr3L 1434298 intron Ptp61F - chr3L 1434351 intron,3` UTR Ptp61F -,SA-2 - chr3L_14_1430001 chr3L_1430001 KN35_1-HE 1405 chr3L 1506001 1506028 chr3L 1513599 1513626 17.6 16 7598 3.0 7.0 5.0 2.7 7625 chr3L 1506001 intron,intron Psa +,cue - chr3L 1509814 intron,intron Psa +,cue - chr3L 1513626 intron,intron Psa +,cue - chr3L_16_1505001 chr3L_1505001 KN35_1-HE 1406 chr3L 1570154 1570186 chr3L 1570232 1570264 20 77 4.0 3.0 3.5 4.4 110 chr3L 1570154 intron CG12004 + chr3L 1570209 intron CG12004 + chr3L 1570264 intron CG12004 + chr3L_20_1570001 chr3L_1570001 KN35_1-HE 1407 chr3L 1571471 1571491 chr3L 1571557 1571577 8 86 3.5 5.5 4.5 1.5 106 chr3L 1571471 intron CG12004 + chr3L 1571524 intron CG12004 + chr3L 1571577 intron CG12004 + chr3L_8_1570001 chr3L_1570001 KN35_1-HE 1408 chr3L 1578574 1578594 chr3L 1578899 1578919 7 325 4.5 7.5 6.0 1.0 345 chr3L 1578574 intron CG13917 + chr3L 1578746 intron CG13917 + chr3L 1578919 intron CG13917 + chr3L_7_1575001 chr3L_1575001 KN35_1-HE 1409 chr3L 1639216 1639242 chr3L 1639398 1639424 8 182 0.5 4.5 2.5 2.3 208 chr3L 1639216 5` UTR metl - chr3L 1639320 intergenic metl -,Bgb + chr3L 1639424 intergenic metl -,Bgb + chr3L_8_1635001 chr3L_1635001 KN35_1-HE 1410 chr3L 1738373 1738383 chr3L 1738451 1738461 7 78 1.5 3.5 2.5 2.0 88 chr3L 1738373 intergenic Gk +,CG18173 - chr3L 1738417 5` UTR Gk + chr3L 1738461 5` UTR Gk + chr3L_7_1735001 chr3L_1735001 KN35_1-HE 1411 chr3L 1740850 1740879 chr3L 1741096 1741125 pogo 9 245 4.0 1.5 2.8 2.4 275 chr3L 1740850 intron Gk + chr3L 1740988 intron Gk + chr3L 1741125 intron Gk + chr3L_9_1740001 chr3L_1740001 KN35_1-HE 1412 chr3L 1757196 1757225 chr3L 1757273 1757302 5 77 1.5 2.5 2.0 1.7 106 chr3L 1757196 exon CG8001 + chr3L 1757249 intron CG8001 + chr3L 1757302 intron CG8001 + chr3L_5_1755001 chr3L_1755001 KN35_1-HE 1413 chr3L 1809525 1809561 chr3L 1809632 1809668 27 107 4.5 6.5 5.5 4.2 143 chr3L 1809525 intergenic not near genes chr3L 1809596 intergenic not near genes chr3L 1809668 intergenic not near genes chr3L_27_1805001 chr3L_1805001 KN35_1-HE 1414 chr3L 1821637 1821666 chr3L 1821720 1821749 10 83 3.5 2.5 3.0 2.5 112 chr3L 1821637 intron GV1 + chr3L 1821693 intron GV1 + chr3L 1821749 intron GV1 + chr3L_10_1820001 chr3L_1820001 KN35_1-HE 1415 chr3L 1845549 1845586 chr3L 1845628 1845665 19 79 6.5 4.0 5.2 3.1 116 chr3L 1845549 intergenic not near genes chr3L 1845607 intergenic not near genes chr3L 1845665 intergenic not near genes chr3L_19_1845001 chr3L_1845001 KN35_1-HE 1416 chr3L 1848659 1848669 chr3L 1848738 1848748 8 79 1.0 0.5 0.8 4.4 89 chr3L 1848659 intergenic not near genes chr3L 1848704 intergenic not near genes chr3L 1848748 intergenic not near genes chr3L_8_1845001 chr3L_1845001 KN35_1-HE 1417 chr3L 1853044 1853050 chr3L 1853129 1853135 4 85 3.5 2.0 2.8 1.1 91 chr3L 1853044 intron CG13936 - chr3L 1853090 intron CG13936 - chr3L 1853135 intron CG13936 - chr3L_4_1850001 chr3L_1850001 KN35_1-HE 1418 chr3L 1922452 1922466 chr3L 1922531 1922544 12 79 16.5 9.5 13.0 0.9 92 chr3L 1922452 intron Dbx + chr3L 1922498 intron Dbx + chr3L 1922544 intron Dbx + chr3L_12_1920001 chr3L_1920001 KN35_1-HE 1419 chr3L 1924963 1924976 chr3L 1925102 1925115 6 139 3.0 5.5 4.2 1.2 152 chr3L 1924963 exon Dbx + chr3L 1925039 intron Dbx + chr3L 1925115 intron Dbx + chr3L_6_1925001 chr3L_1925001 KN35_1-HE 1420 chr3L 1968980 1969014 chr3L 1969103 1969137 15 123 8.5 10.5 9.5 1.4 157 chr3L 1968980 intron CG1927 - chr3L 1969058 intron CG1927 - chr3L 1969137 intron CG1927 - chr3L_15_1965001 chr3L_1965001 KN35_1-HE 1421 chr3L 2010562 2010591 chr3L 2010722 2010751 15 159 1.5 0.0 0.8 8.3 189 chr3L 2010562 3` UTR CR44535 - chr3L 2010656 3` UTR CR44535 - chr3L 2010751 3` UTR CR44535 - chr3L_15_2010001 chr3L_2010001 KN35_1-HE 1422 chr3L 2023261 2023285 chr3L 2023353 2023377 11 92 4.0 7.0 5.5 1.7 116 chr3L 2023261 exon CG42356 - chr3L 2023319 exon CG42356 - chr3L 2023377 exon CG42356 - chr3L_11_2020001 chr3L_2020001 KN35_1-HE 1423 chr3L 2148971 2149007 chr3L 2149269 2149305 23 298 41.5 34.0 37.8 0.6 334 chr3L 2148971 intron zormin - chr3L 2149138 intron zormin - chr3L 2149305 intron zormin - chr3L_23_2145001 chr3L_2145001 KN35_1-HE 1424 chr3L 2182033 2182036 chr3L 6061839 6061842 4 3879806 3.0 0.0 1.5 1.6 3879809 chr3L 2182033 intergenic not near genes chr3L 4121938 intron Chd64 - chr3L 6061842 intron CG10472 - chr3L_4_4120001 chr3L_4120001 KN35_1-HE 1425 chr3L 2308002 2308033 chr3L 2308109 2308140 16 107 5.5 0.5 3.0 4.0 138 chr3L 2308002 intergenic not near genes chr3L 2308071 intergenic not near genes chr3L 2308140 intergenic not near genes chr3L_16_2305001 chr3L_2305001 KN35_1-HE 1426 chr3L 2447502 2447533 chr3L 2456659 2456690 roo 7 9157 5.5 4.0 4.8 1.2 9188 chr3L 2447502 intron CG45186 + chr3L 2452096 intron CG45186 + chr3L 2456690 intron CG45186 + chr3L_7_2450001 chr3L_2450001 KN35_1-HE 1427 chr3L 2473156 2473188 chr3L 2473236 2473268 8 80 3.0 1.0 2.0 2.7 112 chr3L 2473156 intron CG45186 + chr3L 2473212 intron CG45186 + chr3L 2473268 intron CG45186 + chr3L_8_2470001 chr3L_2470001 KN35_1-HE 1428 chr3L 2483149 2483160 chr3L 2483229 2483240 5 80 4.5 4.5 4.5 0.9 91 chr3L 2483149 intron CG45186 + chr3L 2483194 intron CG45186 + chr3L 2483240 intron CG45186 + chr3L_5_2480001 chr3L_2480001 KN35_1-HE 1429 chr3L 2515417 2515429 chr3L 2515500 2515512 11 83 2.5 9.5 6.0 1.6 95 chr3L 2515417 intron Spn - chr3L 2515464 intron Spn - chr3L 2515512 intron Spn - chr3L_11_2515001 chr3L_2515001 KN35_1-HE 1430 chr3L 2518242 2518265 chr3L 2518322 2518345 15 80 10.0 6.0 8.0 1.7 103 chr3L 2518242 intron,intron Spn -,CR45170 + chr3L 2518294 intron,intron Spn -,CR45170 + chr3L 2518345 intron,5` UTR Spn -,CR45170 + chr3L_15_2515001 chr3L_2515001 KN35_1-HE 1431 chr3L 2523619 2523652 chr3L 2523696 2523733 9 77 3.5 0.0 1.8 3.2 114 chr3L 2523619 intron Spn - chr3L 2523676 intron Spn - chr3L 2523733 intron Spn - chr3L_9_2520001 chr3L_2520001 KN35_1-HE 1432 chr3L 2527922 2527952 chr3L 2528544 2528574 13 622 5.5 8.0 6.8 1.7 652 chr3L 2527922 intron Spn - chr3L 2528248 intron Spn - chr3L 2528574 intron Spn - chr3L_13_2525001 chr3L_2525001 KN35_1-HE 1433 chr3L 2533649 2533682 chr3L 2533732 2533765 22 83 6.5 7.5 7.0 2.8 116 chr3L 2533649 intron Spn - chr3L 2533707 intron Spn - chr3L 2533765 intron Spn - chr3L_22_2530001 chr3L_2530001 KN35_1-HE 1434 chr3L 2561528 2561561 chr3L 2561606 2561639 15 78 5.0 5.0 5.0 2.5 111 chr3L 2561528 intron msn - chr3L 2561584 intron msn - chr3L 2561639 intron msn - chr3L_15_2560001 chr3L_2560001 KN35_1-HE 1435 chr3L 2581897 2581914 chr3L 2581992 2582009 8 95 3.5 6.0 4.8 1.4 112 chr3L 2581897 intron msn - chr3L 2581953 intron msn - chr3L 2582009 intron msn - chr3L_8_2580001 chr3L_2580001 KN35_1-HE 1436 chr3L 2590359 2590372 chr3L 2590469 2590482 6 110 5.0 0.0 2.5 1.7 123 chr3L 2590359 intron dos + chr3L 2590420 intron dos + chr3L 2590482 intron dos + chr3L_6_2590001 chr3L_2590001 KN35_1-HE 1437 chr3L 2590872 2590913 chr3L 2590969 2591013 11 99 2.0 2.5 2.2 3.4 141 chr3L 2590872 intron dos + chr3L 2590942 intron dos + chr3L 2591013 intron dos + chr3L_11_2590001 chr3L_2590001 KN35_1-HE 1438 chr3L 2595576 2595610 chr3L 2595663 2595697 13 87 2.5 2.5 2.5 3.7 121 chr3L 2595576 3` UTR dos + chr3L 2595636 intergenic dos +,CG16984 +,CG12182 - chr3L 2595697 intergenic CG16984 +,dos +,CG12182 - chr3L_13_2595001 chr3L_2595001 KN35_1-HE 1439 chr3L 2647286 2647316 chr3L 2647366 2647396 14 80 0.0 0.5 0.2 11.7 110 chr3L 2647286 intergenic CG1143 + chr3L 2647341 intergenic CG1143 + chr3L 2647396 intergenic CG1143 + chr3L_14_2645001 chr3L_2645001 KN35_1-HE 1440 chr3L 2676414 2676443 chr3L 2676494 2676523 15 80 4.0 3.0 3.5 3.3 109 chr3L 2676414 intron Fife - chr3L 2676468 intron Fife - chr3L 2676523 intron Fife - chr3L_15_2675001 chr3L_2675001 KN35_1-HE 1441 chr3L 2683942 2683973 chr3L 2684019 2684050 15 77 7.0 2.5 4.8 2.6 108 chr3L 2683942 intron Fife - chr3L 2683996 intron Fife - chr3L 2684050 intron Fife - chr3L_15_2680001 chr3L_2680001 KN35_1-HE 1442 chr3L 2712683 2712719 chr3L 2712774 2712804 13 91 4.5 1.0 2.8 3.4 121 chr3L 2712683 intergenic not near genes chr3L 2712744 intergenic not near genes chr3L 2712804 intergenic not near genes chr3L_13_2710001 chr3L_2710001 KN35_1-HE 1443 chr3L 2719537 2719559 chr3L 2719640 2719662 8 103 4.5 2.5 3.5 1.8 125 chr3L 2719537 3` UTR Mrtf - chr3L 2719600 3` UTR Mrtf - chr3L 2719662 3` UTR Mrtf - chr3L_8_2715001 chr3L_2715001 KN35_1-HE 1444 chr3L 2731515 2731549 chr3L 2731598 2731632 18 83 4.5 4.5 4.5 3.3 117 chr3L 2731515 intron Mrtf - chr3L 2731574 intron Mrtf - chr3L 2731632 intron Mrtf - chr3L_18_2730001 chr3L_2730001 KN35_1-HE 1445 chr3L 2750260 2750294 chr3L 2750341 2750375 16 81 3.0 3.0 3.0 4.0 115 chr3L 2750260 intron Mrtf - chr3L 2750318 intron Mrtf - chr3L 2750375 intron Mrtf - chr3L_16_2750001 chr3L_2750001 KN35_1-HE 1446 chr3L 2775882 2775911 chr3L 2776155 2776184 8 273 22.5 30.5 26.5 0.3 302 chr3L 2775882 exon Atg2 + chr3L 2776033 exon Atg2 + chr3L 2776184 exon Atg2 + chr3L_8_2775001 chr3L_2775001 KN35_1-HE 1447 chr3L 2795724 2795755 chr3L 2795848 2795879 11 124 4.0 5.5 4.8 1.9 155 chr3L 2795724 intron CG43444 - chr3L 2795802 intron CG43444 - chr3L 2795879 intron CG43444 - chr3L_11_2795001 chr3L_2795001 KN35_1-HE 1448 chr3L 2845276 2845309 chr3L 2845361 2845394 9 85 2.5 2.5 2.5 2.6 118 chr3L 2845276 intron CG43444 - chr3L 2845335 intron CG43444 - chr3L 2845394 intron CG43444 - chr3L_9_2845001 chr3L_2845001 KN35_1-HE 1449 chr3L 2850147 2850181 chr3L 2850245 2850279 10 98 4.0 3.0 3.5 2.2 132 chr3L 2850147 intron CG43444 - chr3L 2850213 intron CG43444 - chr3L 2850279 intron CG43444 - chr3L_10_2850001 chr3L_2850001 KN35_1-HE 1450 chr3L 2858990 2859024 chr3L 2859067 2859101 18 77 2.0 4.5 3.2 4.3 111 chr3L 2858990 intron CG43444 - chr3L 2859046 intron CG43444 - chr3L 2859101 intron CG43444 - chr3L_18_2855001 chr3L_2855001 KN35_1-HE 1451 chr3L 2863794 2863822 chr3L 2863878 2863906 8 84 3.0 4.0 3.5 1.8 112 chr3L 2863794 intron CG43444 - chr3L 2863850 intron CG43444 - chr3L 2863906 intron CG43444 - chr3L_8_2860001 chr3L_2860001 KN35_1-HE 1452 chr3L 2874345 2874374 chr3L 2874431 2874454 14 86 4.0 4.5 4.2 2.7 109 chr3L 2874345 intron CG43444 - chr3L 2874400 intron CG43444 - chr3L 2874454 intron CG43444 - chr3L_14_2870001 chr3L_2870001 KN35_1-HE 1453 chr3L 2899575 2899607 chr3L 2899689 2899721 27 114 5.0 3.0 4.0 5.4 146 chr3L 2899575 intron Shab + chr3L 2899648 intron Shab + chr3L 2899721 intron Shab + chr3L_27_2895001 chr3L_2895001 KN35_1-HE 1454 chr3L 2927837 2927872 chr3L 2936115 2936150 Tirant 22 8278 5.0 4.5 4.8 3.8 8313 chr3L 2927837 intron Shab + chr3L 2931994 intron Shab + chr3L 2936150 intron Shab + chr3L_22_2930001 chr3L_2930001 KN35_1-HE 1455 chr3L 3040322 3040350 chr3L 3042112 3042140 S-element 6 1790 4.0 2.0 3.0 1.5 1818 chr3L 3040322 3` UTR CG2162 + chr3L 3041231 intergenic not near genes chr3L 3042140 intergenic Jafrac2 + chr3L_6_3040001 chr3L_3040001 KN35_1-HE 1456 chr3L 3051742 3051752 chr3L 3051985 3051995 pogo 5 243 5.5 3.0 4.2 1.0 253 chr3L 3051742 3` UTR CG32485 + chr3L 3051868 intergenic CG32485 + chr3L 3051995 intergenic CG32485 + chr3L_5_3050001 chr3L_3050001 KN35_1-HE 1457 chr3L 3061283 3061316 chr3L 3069867 3069900 Tirant 14 8584 4.5 4.5 4.5 2.5 8617 chr3L 3061283 intron CG32486 - chr3L 3065592 intron CG32486 - chr3L 3069900 intron CG32486 - chr3L_14_3065001 chr3L_3065001 KN35_1-HE 1458 chr3L 3084395 3084430 chr3L 3084502 3084537 20 107 3.5 2.0 2.8 5.3 142 chr3L 3084395 intron CG11486 + chr3L 3084466 intron CG11486 + chr3L 3084537 intron CG11486 + chr3L_20_3080001 chr3L_3080001 KN35_1-HE 1459 chr3L 3103451 3103465 chr3L 3103528 3103542 7 77 8.5 0.0 4.2 1.3 91 chr3L 3103451 intron Cht7 - chr3L 3103496 intron Cht7 - chr3L 3103542 intron Cht7 - chr3L_7_3100001 chr3L_3100001 KN35_1-HE 1460 chr3L 3252350 3252363 chr3L 3252427 3252440 5 77 0.0 1.0 0.5 3.3 90 chr3L 3252350 5` UTR CR43626 + chr3L 3252395 5` UTR CR43626 + chr3L 3252440 5` UTR CR43626 + chr3L_5_3250001 chr3L_3250001 KN35_1-HE 1461 chr3L 3254082 3254116 chr3L 3254173 3254207 14 91 1.0 2.0 1.5 5.6 125 chr3L 3254082 5` UTR CR43626 + chr3L 3254144 5` UTR CR43626 + chr3L 3254207 5` UTR CR43626 + chr3L_14_3250001 chr3L_3250001 KN35_1-HE 1462 chr3L 3259815 3259832 chr3L 3259916 3259933 8 101 2.5 2.0 2.2 2.5 118 chr3L 3259815 intron ckd + chr3L 3259874 intron ckd + chr3L 3259933 intron ckd + chr3L_8_3255001 chr3L_3255001 KN35_1-HE 1463 chr3L 3268948 3268962 chr3L 3269033 3269047 6 85 4.0 0.0 2.0 2.0 99 chr3L 3268948 3` UTR CG34265 + chr3L 3268998 intergenic CG34265 + chr3L 3269047 intergenic CG34265 + chr3L_6_3265001 chr3L_3265001 KN35_1-HE 1464 chr3L 3281436 3281473 chr3L 3281933 3281970 Doc 14 497 4.5 6.0 5.2 2.3 534 chr3L 3281436 intron CG12017 + chr3L 3281703 intron CG12017 + chr3L 3281970 intron CG12017 + chr3L_14_3280001 chr3L_3280001 KN35_1-HE 1465 chr3L 3293273 3293301 chr3L 3293384 3293412 5 111 0.5 7.0 3.8 1.0 139 chr3L 3293273 intron CG12009 + chr3L 3293342 intron CG12009 + chr3L 3293412 intron CG12009 + chr3L_5_3290001 chr3L_3290001 KN35_1-HE 1466 chr3L 3307418 3307445 chr3L 3307499 3307526 12 81 2.0 4.0 3.0 3.0 108 chr3L 3307418 intron ZnT63C + chr3L 3307472 intron ZnT63C + chr3L 3307526 intron ZnT63C + chr3L_12_3305001 chr3L_3305001 KN35_1-HE 1467 chr3L 3317530 3317556 chr3L 3317610 3317636 11 80 2.5 5.5 4.0 2.2 106 chr3L 3317530 intergenic Drsl5 +,PIG-C - chr3L 3317583 intergenic Drsl5 +,PIG-C - chr3L 3317636 intergenic PIG-C -,Drsl5 + chr3L_11_3315001 chr3L_3315001 KN35_1-HE 1468 chr3L 3393019 3393030 chr3L 3393101 3393114 11 83 4.0 10.0 7.0 1.4 95 chr3L 3393019 intergenic not near genes chr3L 3393066 intergenic not near genes chr3L 3393114 intergenic not near genes chr3L_11_3390001 chr3L_3390001 KN35_1-HE 1469 chr3L 3400143 3400177 chr3L 3400273 3400307 23 130 2.5 4.5 3.5 5.1 164 chr3L 3400143 intergenic not near genes chr3L 3400225 intergenic not near genes chr3L 3400307 intergenic not near genes chr3L_23_3400001 chr3L_3400001 KN35_1-HE 1470 chr3L 3432005 3432039 chr3L 3432090 3432124 16 85 1.5 3.5 2.5 4.6 119 chr3L 3432005 intron eIF5B - chr3L 3432064 intron eIF5B - chr3L 3432124 intron eIF5B - chr3L_16_3430001 chr3L_3430001 KN35_1-HE 1471 chr3L 3451374 3451380 chr3L 3451475 3451481 7 101 1.0 3.5 2.2 2.2 107 chr3L 3451374 intron eIF5B - chr3L 3451428 intron eIF5B - chr3L 3451481 intron eIF5B - chr3L_7_3450001 chr3L_3450001 KN35_1-HE 1472 chr3L 3469648 3469679 chr3L 3469735 3469766 22 87 6.5 7.0 6.8 2.8 118 chr3L 3469648 intron CG14971 - chr3L 3469707 intron CG14971 - chr3L 3469766 intron CG14971 - chr3L_22_3465001 chr3L_3465001 KN35_1-HE 1473 chr3L 3470158 3470185 chr3L 3470235 3470262 7 77 1.5 7.0 4.2 1.3 104 chr3L 3470158 intron CG14971 - chr3L 3470210 intron CG14971 - chr3L 3470262 intron CG14971 - chr3L_7_3470001 chr3L_3470001 KN35_1-HE 1474 chr3L 3475077 3475110 chr3L 3475517 3475555 jockey 8 444 2.0 5.0 3.5 1.8 478 chr3L 3475077 intron CG42324 + chr3L 3475316 intron CG42324 + chr3L 3475555 intron CG42324 + chr3L_8_3475001 chr3L_3475001 KN35_1-HE 1475 chr3L 3494195 3494207 chr3L 3494273 3494285 8 78 7.0 7.5 7.2 1.0 90 chr3L 3494195 intron CG42324 + chr3L 3494240 intron CG42324 + chr3L 3494285 intron CG42324 + chr3L_8_3490001 chr3L_3490001 KN35_1-HE 1476 chr3L 3552900 3552906 chr3L 3552977 3552983 5 77 5.0 9.5 7.2 0.6 83 chr3L 3552900 intron Eip63E + chr3L 3552942 intron Eip63E + chr3L 3552983 intron Eip63E + chr3L_5_3550001 chr3L_3550001 KN35_1-HE 1477 chr3L 3574485 3574512 chr3L 3574620 3574647 29 135 6.0 6.0 6.0 4.1 162 chr3L 3574485 intron Eip63E + chr3L 3574566 intron Eip63E + chr3L 3574647 intron Eip63E + chr3L_29_3570001 chr3L_3570001 KN35_1-HE 1478 chr3L 3601301 3601330 chr3L 3606613 3606642 copia 16 5312 5.5 6.0 5.8 2.4 5341 chr3L 3601301 intron Eip63E + chr3L 3603972 intron Eip63E + chr3L 3606642 intron Eip63E + chr3L_16_3600001 chr3L_3600001 KN35_1-HE 1479 chr3L 3619397 3619434 chr3L 3619492 3619529 18 95 5.5 5.0 5.2 2.9 132 chr3L 3619397 intergenic not near genes chr3L 3619463 intergenic not near genes chr3L 3619529 intergenic not near genes chr3L_18_3615001 chr3L_3615001 KN35_1-HE 1480 chr3L 3702597 3702626 chr3L 3702682 3702716 14 87 4.0 4.5 4.2 2.7 119 chr3L 3702597 intergenic not near genes chr3L 3702656 intergenic not near genes chr3L 3702716 intergenic not near genes chr3L_14_3700001 chr3L_3700001 KN35_1-HE 1481 chr3L 3709457 3709467 chr3L 3709540 3709550 5 83 1.0 5.5 3.2 1.2 93 chr3L 3709457 intergenic CR45675 + chr3L 3709504 intergenic not near genes chr3L 3709550 intergenic not near genes chr3L_5_3705001 chr3L_3705001 KN35_1-HE 1482 chr3L 3753258 3753294 chr3L 3753352 3753388 25 94 8.5 3.0 5.8 3.7 130 chr3L 3753258 intron CG32264 - chr3L 3753323 intron CG32264 - chr3L 3753388 intron CG32264 - chr3L_25_3750001 chr3L_3750001 KN35_1-HE 1483 chr3L 3763755 3763768 chr3L 3763837 3763850 9 82 4.5 0.0 2.2 2.8 95 chr3L 3763755 intron CG32264 - chr3L 3763802 intron CG32264 - chr3L 3763850 intron CG32264 - chr3L_9_3760001 chr3L_3760001 KN35_1-HE 1484 chr3L 3783270 3783289 chr3L 3783347 3783366 6 77 3.0 5.0 4.0 1.2 96 chr3L 3783270 intron CG32264 - chr3L 3783318 intron CG32264 - chr3L 3783366 intron CG32264 - chr3L_6_3780001 chr3L_3780001 KN35_1-HE 1485 chr3L 3790210 3790245 chr3L 3790288 3790322 13 77 3.0 3.0 3.0 3.2 112 chr3L 3790210 intron CG32264 - chr3L 3790266 intron CG32264 - chr3L 3790322 intron CG32264 - chr3L_13_3790001 chr3L_3790001 KN35_1-HE 1486 chr3L 3814881 3815077 chr3L 3814968 3815159 24 84 5.5 2.5 4.0 4.8 278 chr3L 3814881 intron,intron Scsalpha +,CR43932 - chr3L 3815020 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815159 intron,intron Scsalpha +,CR43932 - chr3L_24_3815001 chr3L_3815001 KN35_1-HE 1487 chr3L 3833736 3833766 chr3L 3833978 3834008 pogo 12 242 9.0 2.5 5.8 1.8 272 chr3L 3833736 intron enc + chr3L 3833872 intron enc + chr3L 3834008 intron enc + chr3L_12_3830001 chr3L_3830001 KN35_1-HE 1488 chr3L 3853603 3853637 chr3L 3853696 3853730 22 93 3.0 1.5 2.2 6.9 127 chr3L 3853603 intron Awh + chr3L 3853666 intron Awh + chr3L 3853730 intron Awh + chr3L_22_3850001 chr3L_3850001 KN35_1-HE 1489 chr3L 3889131 3889147 chr3L 3889215 3889231 4 84 1.0 0.5 0.8 2.2 100 chr3L 3889131 intergenic not near genes chr3L 3889181 intergenic not near genes chr3L 3889231 intergenic not near genes chr3L_4_3885001 chr3L_3885001 KN35_1-HE 1490 chr3L 4015732 4015767 chr3L 4015816 4015851 14 84 5.5 4.5 5.0 2.3 119 chr3L 4015732 intergenic not near genes chr3L 4015792 intergenic not near genes chr3L 4015851 intergenic not near genes chr3L_14_4015001 chr3L_4015001 KN35_1-HE 1491 chr3L 4052247 4052282 chr3L 4052324 4052359 15 77 3.0 3.5 3.2 3.6 112 chr3L 4052247 intron CG1136 + chr3L 4052303 intron CG1136 + chr3L 4052359 intron CG1136 + chr3L_15_4050001 chr3L_4050001 KN35_1-HE 1492 chr3L 4195139 4195173 chr3L 4195244 4195278 12 104 4.0 8.0 6.0 1.7 139 chr3L 4195139 exon CG43367 + chr3L 4195208 intron CG43367 + chr3L 4195278 intron CG43367 + chr3L_12_4195001 chr3L_4195001 KN35_1-HE 1493 chr3L 4210917 4210942 chr3L 4210998 4211023 14 81 6.5 5.0 5.8 2.1 106 chr3L 4210917 intron,3` UTR CG43367 +,Cpr64Ab - chr3L 4210970 intron,3` UTR CG43367 +,Cpr64Ab - chr3L 4211023 intron,exon CG43367 +,Cpr64Ab - chr3L_14_4210001 chr3L_4210001 KN35_1-HE 1494 chr3L 4293436 4293445 chr3L 4293677 4293686 6 241 4.0 0.0 2.0 2.0 250 chr3L 4293436 intergenic CG1319 + chr3L 4293561 intergenic CG1319 +,dyl - chr3L 4293686 intergenic CG1319 +,dyl - chr3L_6_4290001 chr3L_4290001 KN35_1-HE 1495 chr3L 4328739 4328765 chr3L 4336238 4336264 412 20 7499 3.5 10.5 7.0 2.5 7525 chr3L 4328739 intron Cip4 - chr3L 4332502 intron Cip4 - chr3L 4336264 intron Cip4 - chr3L_20_4330001 chr3L_4330001 KN35_1-HE 1496 chr3L 4343509 4343517 chr3L 4343587 4343595 6 78 0.5 0.0 0.2 5.0 86 chr3L 4343509 intron Cip4 - chr3L 4343552 intron Cip4 - chr3L 4343595 intron Cip4 - chr3L_6_4340001 chr3L_4340001 KN35_1-HE 1497 chr3L 4345853 4345886 chr3L 4346012 4346045 18 159 5.5 6.5 6.0 2.6 192 chr3L 4345853 intron,5` UTR Cip4 -,CR45156 + chr3L 4345949 intron,5` UTR Cip4 -,CR45156 + chr3L 4346045 intron,5` UTR Cip4 -,CR45156 + chr3L_18_4345001 chr3L_4345001 KN35_1-HE 1498 chr3L 4519054 4519087 chr3L 4519163 4519196 8 109 2.5 4.5 3.5 1.8 142 chr3L 4519054 intron Tie - chr3L 4519125 intron Tie - chr3L 4519196 intron Tie - chr3L_8_4515001 chr3L_4515001 KN35_1-HE 1499 chr3L 4519415 4519451 chr3L 4519493 4519529 15 78 5.0 4.5 4.8 2.6 114 chr3L 4519415 intron Tie - chr3L 4519472 intron Tie - chr3L 4519529 intron Tie - chr3L_15_4515001 chr3L_4515001 KN35_1-HE 1500 chr3L 4576680 4576712 chr3L 4576783 4576815 29 103 5.5 0.0 2.8 7.6 135 chr3L 4576680 intron CG42540 + chr3L 4576748 intron CG42540 + chr3L 4576815 intron CG42540 + chr3L_29_4575001 chr3L_4575001 KN35_1-HE 1501 chr3L 4577146 4577177 chr3L 4577223 4577254 22 77 5.5 9.5 7.5 2.6 108 chr3L 4577146 intron CG42540 + chr3L 4577200 intron CG42540 + chr3L 4577254 intron CG42540 + chr3L_22_4575001 chr3L_4575001 KN35_1-HE 1502 chr3L 4607279 4607289 chr3L 4607371 4607381 7 92 5.5 5.0 5.2 1.1 102 chr3L 4607279 intron Src64B - chr3L 4607330 intron Src64B - chr3L 4607381 intron Src64B - chr3L_7_4605001 chr3L_4605001 KN35_1-HE 1503 chr3L 4614581 4614604 chr3L 4614812 4614835 7 231 4.0 0.0 2.0 2.3 254 chr3L 4614581 intron Src64B - chr3L 4614708 intron Src64B - chr3L 4614835 intron Src64B - chr3L_7_4610001 chr3L_4610001 KN35_1-HE 1504 chr3L 4673413 4673443 chr3L 4673548 4673578 18 135 5.0 4.5 4.8 3.1 165 chr3L 4673413 intron axo - chr3L 4673496 intron axo - chr3L 4673578 intron axo - chr3L_18_4670001 chr3L_4670001 KN35_1-HE 1505 chr3L 4686005 4686014 chr3L 4686088 4686097 6 83 10.0 4.5 7.2 0.7 92 chr3L 4686005 intron axo - chr3L 4686051 intron axo - chr3L 4686097 intron axo - chr3L_6_4685001 chr3L_4685001 KN35_1-HE 1506 chr3L 4695270 4695286 chr3L 4695354 4695370 10 84 1.5 0.0 0.8 5.6 100 chr3L 4695270 intron RhoGEF64C + chr3L 4695320 intron RhoGEF64C + chr3L 4695370 intron RhoGEF64C + chr3L_10_4695001 chr3L_4695001 KN35_1-HE 1507 chr3L 4701819 4701843 chr3L 4701901 4701925 8 81 7.0 2.5 4.8 1.4 106 chr3L 4701819 intron RhoGEF64C + chr3L 4701872 intron RhoGEF64C + chr3L 4701925 intron RhoGEF64C + chr3L_8_4700001 chr3L_4700001 KN35_1-HE 1508 chr3L 4708764 4708780 chr3L 4708841 4708857 10 77 1.0 3.0 2.0 3.3 93 chr3L 4708764 intron RhoGEF64C + chr3L 4708810 intron RhoGEF64C + chr3L 4708857 intron RhoGEF64C + chr3L_10_4705001 chr3L_4705001 KN35_1-HE 1509 chr3L 4750347 4750374 chr3L 4750495 4750526 15 152 5.0 6.0 5.5 2.3 179 chr3L 4750347 intron RhoGEF64C + chr3L 4750436 intron RhoGEF64C + chr3L 4750526 intron RhoGEF64C + chr3L_15_4750001 chr3L_4750001 KN35_1-HE 1510 chr3L 4840405 4840420 chr3L 4840499 4840530 8 108 2.5 0.0 1.2 3.6 125 chr3L 4840405 intergenic CG13707 - chr3L 4840468 intergenic CG13707 - chr3L 4840530 intergenic CG13707 - chr3L_8_4840001 chr3L_4840001 KN35_1-HE 1511 chr3L 4901132 4901147 chr3L 4907323 4907338 diver 7 6191 1.5 2.5 2.0 2.3 6206 chr3L 4901132 intergenic CG13704 + chr3L 4904235 intergenic not near genes chr3L 4907338 intergenic not near genes chr3L_7_4900001 chr3L_4900001 KN35_1-HE 1512 chr3L 4922194 4922206 chr3L 4922281 4922293 6 87 4.0 0.0 2.0 2.0 99 chr3L 4922194 intergenic not near genes chr3L 4922244 intergenic not near genes chr3L 4922293 intergenic not near genes chr3L_6_4920001 chr3L_4920001 KN35_1-HE 1513 chr3L 4957501 4957525 chr3L 4957582 4957606 14 81 6.5 5.5 6.0 2.0 105 chr3L 4957501 intron Con - chr3L 4957554 intron Con - chr3L 4957606 intron Con - chr3L_14_4955001 chr3L_4955001 KN35_1-HE 1514 chr3L 4965658 4965693 chr3L 4965735 4965772 15 75 0.5 6.0 3.2 3.6 114 chr3L 4965658 intron Con - chr3L 4965715 intron Con - chr3L 4965772 intron Con - chr3L_15_4965001 chr3L_4965001 KN35_1-HE 1515 chr3L 4967822 4967831 chr3L 4967908 4967917 6 86 13.0 19.0 16.0 0.4 95 chr3L 4967822 intron Con - chr3L 4967870 intron Con - chr3L 4967917 intron Con - chr3L_6_4965001 chr3L_4965001 KN35_1-HE 1516 chr3L 4974273 4974293 chr3L 4974362 4974383 14 90 9.0 7.0 8.0 1.6 110 chr3L 4974273 intron Con - chr3L 4974328 intron Con - chr3L 4974383 intron Con - chr3L_14_4970001 chr3L_4970001 KN35_1-HE 1517 chr3L 4997039 4997074 chr3L 4997164 4997199 9 125 4.0 2.5 3.2 2.1 160 chr3L 4997039 intron Con - chr3L 4997119 intron Con - chr3L 4997199 intron Con - chr3L_9_4995001 chr3L_4995001 KN35_1-HE 1518 chr3L 5034158 5034192 chr3L 5043311 5043345 roo 6 9153 6.0 5.5 5.8 0.9 9187 chr3L 5034158 intron Con - chr3L 5038752 intron Con - chr3L 5043345 intron Con - chr3L_6_5035001 chr3L_5035001 KN35_1-HE 1519 chr3L 5045453 5045472 chr3L 5050259 5050278 Doc 8 4806 6.0 3.5 4.8 1.4 4825 chr3L 5045453 intron Con - chr3L 5047866 intron Con - chr3L 5050278 intron Con - chr3L_8_5045001 chr3L_5045001 KN35_1-HE 1520 chr3L 5066308 5066325 chr3L 5066408 5066425 7 100 1.5 2.5 2.0 2.3 117 chr3L 5066308 intron Con - chr3L 5066366 intron Con - chr3L 5066425 intron Con - chr3L_7_5065001 chr3L_5065001 KN35_1-HE 1521 chr3L 5101205 5101231 chr3L 5101286 5101312 13 81 2.0 4.0 3.0 3.2 107 chr3L 5101205 intergenic not near genes chr3L 5101258 intergenic not near genes chr3L 5101312 intergenic not near genes chr3L_13_5100001 chr3L_5100001 KN35_1-HE 1522 chr3L 5103612 5103632 chr3L 5103693 5103713 9 81 6.0 0.0 3.0 2.2 101 chr3L 5103612 intergenic not near genes chr3L 5103662 intergenic not near genes chr3L 5103713 intergenic not near genes chr3L_9_5100001 chr3L_5100001 KN35_1-HE 1523 chr3L 5104483 5104510 chr3L 5124618 5124645 10 20135 2.0 5.0 3.5 2.2 20162 chr3L 5104483 intergenic not near genes chr3L 5114564 intergenic not near genes chr3L 5124645 intergenic not near genes chr3L_10_5110001 chr3L_5110001 KN35_1-HE 1524 chr3L 5164641 5164668 chr3L 5164718 5164745 9 77 3.5 5.0 4.2 1.7 104 chr3L 5164641 intron shep - chr3L 5164693 intron shep - chr3L 5164745 intron shep - chr3L_9_5160001 chr3L_5160001 KN35_1-HE 1525 chr3L 5194382 5194397 chr3L 5194459 5194474 8 77 0.0 11.0 5.5 1.2 92 chr3L 5194382 intron shep - chr3L 5194428 intron shep - chr3L 5194474 intron shep - chr3L_8_5190001 chr3L_5190001 KN35_1-HE 1526 chr3L 5203099 5203114 chr3L 5203204 5203219 9 105 0.0 0.0 0.0 9.0 120 chr3L 5203099 intron shep - chr3L 5203159 intron shep - chr3L 5203219 intron shep - chr3L_9_5200001 chr3L_5200001 KN35_1-HE 1527 chr3L 5219620 5219647 chr3L 5219697 5219724 9 77 7.0 3.0 5.0 1.5 104 chr3L 5219620 intron shep - chr3L 5219672 intron shep - chr3L 5219724 intron shep - chr3L_9_5215001 chr3L_5215001 KN35_1-HE 1528 chr3L 5251858 5251871 chr3L 5251938 5251951 7 80 9.5 9.0 9.2 0.7 93 chr3L 5251858 intron shep - chr3L 5251904 intron shep - chr3L 5251951 intron shep - chr3L_7_5250001 chr3L_5250001 KN35_1-HE 1529 chr3L 5261166 5261176 chr3L 5261246 5261256 5 80 8.5 6.0 7.2 0.6 90 chr3L 5261166 intron shep - chr3L 5261211 intron shep - chr3L 5261256 intron shep - chr3L_5_5260001 chr3L_5260001 KN35_1-HE 1530 chr3L 5269284 5269286 chr3L 5269414 5269416 5 130 17.5 12.5 15.0 0.3 132 chr3L 5269284 intron shep - chr3L 5269350 intron shep - chr3L 5269416 intron shep - chr3L_5_5265001 chr3L_5265001 KN35_1-HE 1531 chr3L 5271166 5271202 chr3L 5271245 5271281 9 79 2.0 0.5 1.2 4.1 115 chr3L 5271166 intron shep - chr3L 5271224 intron shep - chr3L 5271281 intron shep - chr3L_9_5270001 chr3L_5270001 KN35_1-HE 1532 chr3L 5278151 5278181 chr3L 5278243 5278273 12 91 4.5 3.0 3.8 2.5 122 chr3L 5278151 intergenic shep - chr3L 5278212 intergenic shep - chr3L 5278273 intergenic shep - chr3L_12_5275001 chr3L_5275001 KN35_1-HE 1533 chr3L 5299149 5299171 chr3L 5306586 5306608 Quasimodo 8 7437 6.0 0.0 3.0 2.0 7459 chr3L 5299149 intergenic not near genes chr3L 5302878 intergenic not near genes chr3L 5306608 intergenic not near genes chr3L_8_5300001 chr3L_5300001 KN35_1-HE 1534 chr3L 5361015 5361051 chr3L 5361101 5361136 6 85 1.0 4.0 2.5 1.7 121 chr3L 5361015 exon CG4769 + chr3L 5361076 intron CG4769 + chr3L 5361136 intron CG4769 + chr3L_6_5360001 chr3L_5360001 KN35_1-HE 1535 chr3L 5409333 5409367 chr3L 5409539 5409573 6 206 2.0 0.0 1.0 3.0 240 chr3L 5409333 intergenic not near genes chr3L 5409453 intergenic not near genes chr3L 5409573 intergenic not near genes chr3L_6_5405001 chr3L_5405001 KN35_1-HE 1536 chr3L 5412797 5412830 chr3L 5412958 5412991 14 161 7.5 4.5 6.0 2.0 194 chr3L 5412797 intergenic not near genes chr3L 5412894 intergenic not near genes chr3L 5412991 intergenic not near genes chr3L_14_5410001 chr3L_5410001 KN35_1-HE 1537 chr3L 5449537 5449554 chr3L 5449617 5449634 12 80 3.5 1.5 2.5 3.4 97 chr3L 5449537 intergenic not near genes chr3L 5449586 intergenic not near genes chr3L 5449634 intergenic not near genes chr3L_12_5445001 chr3L_5445001 KN35_1-HE 1538 chr3L 5469424 5469454 chr3L 5469541 5469571 24 117 4.0 3.0 3.5 5.3 147 chr3L 5469424 intergenic not near genes chr3L 5469498 intergenic not near genes chr3L 5469571 intergenic not near genes chr3L_24_5465001 chr3L_5465001 KN35_1-HE 1539 chr3L 5498416 5498434 chr3L 5498494 5498512 5 78 1.5 5.0 3.2 1.2 96 chr3L 5498416 exon blanks - chr3L 5498464 exon blanks - chr3L 5498512 exon blanks - chr3L_5_5495001 chr3L_5495001 KN35_1-HE 1540 chr3L 5504559 5504569 chr3L 5504638 5504648 6 79 8.5 0.5 4.5 1.1 89 chr3L 5504559 intron CG34342 - chr3L 5504604 intron CG34342 - chr3L 5504648 intron CG34342 - chr3L_6_5500001 chr3L_5500001 KN35_1-HE 1541 chr3L 5514744 5514767 chr3L 5514822 5514845 10 78 6.0 5.5 5.8 1.5 101 chr3L 5514744 intron Lkr - chr3L 5514794 intron Lkr - chr3L 5514845 intron Lkr - chr3L_10_5510001 chr3L_5510001 KN35_1-HE 1542 chr3L 5519817 5519834 chr3L 5519903 5519920 4 86 0.0 5.5 2.8 1.1 103 chr3L 5519817 intron Lkr - chr3L 5519868 intron Lkr - chr3L 5519920 intron Lkr - chr3L_4_5515001 chr3L_5515001 KN35_1-HE 1543 chr3L 5521258 5521264 chr3L 5521345 5521351 5 87 6.0 6.5 6.2 0.7 93 chr3L 5521258 intron Lkr - chr3L 5521304 intron Lkr - chr3L 5521351 intron Lkr - chr3L_5_5520001 chr3L_5520001 KN35_1-HE 1544 chr3L 5549442 5549468 chr3L 5549520 5549546 10 75 4.5 5.0 4.8 1.7 104 chr3L 5549442 intron CG10625 - chr3L 5549494 intron CG10625 - chr3L 5549546 intron CG10625 - chr3L_10_5545001 chr3L_5545001 KN35_1-HE 1545 chr3L 5632468 5632489 chr3L 5632551 5632572 12 83 7.0 7.5 7.2 1.5 104 chr3L 5632468 intron Blimp-1 + chr3L 5632520 intron Blimp-1 + chr3L 5632572 intron Blimp-1 + chr3L_12_5630001 chr3L_5630001 KN35_1-HE 1546 chr3L 5677188 5677206 chr3L 5677265 5677283 11 77 2.0 3.5 2.8 2.9 95 chr3L 5677188 intron sif + chr3L 5677236 intron sif + chr3L 5677283 intron sif + chr3L_11_5675001 chr3L_5675001 KN35_1-HE 1547 chr3L 5770934 5770946 chr3L 5771043 5771055 8 109 7.0 6.0 6.5 1.1 121 chr3L 5770934 intron scny + chr3L 5770994 intron scny + chr3L 5771055 intron scny + chr3L_8_5770001 chr3L_5770001 KN35_1-HE 1548 chr3L 5788701 5788734 chr3L 5788783 5788814 10 80 3.5 5.0 4.2 1.9 113 chr3L 5788701 intergenic not near genes chr3L 5788758 intergenic not near genes chr3L 5788814 intergenic not near genes chr3L_10_5785001 chr3L_5785001 KN35_1-HE 1549 chr3L 5825092 5825121 chr3L 5825176 5825206 10 85 4.5 0.0 2.2 3.1 114 chr3L 5825092 intron vn - chr3L 5825149 intron vn - chr3L 5825206 intron vn - chr3L_10_5825001 chr3L_5825001 KN35_1-HE 1550 chr3L 5831330 5831340 chr3L 5831424 5831434 7 94 2.5 0.0 1.2 3.2 104 chr3L 5831330 intron vn - chr3L 5831382 intron vn - chr3L 5831434 intron vn - chr3L_7_5830001 chr3L_5830001 KN35_1-HE 1551 chr3L 5836390 5836402 chr3L 5836472 5836484 12 82 6.0 5.0 5.5 1.8 94 chr3L 5836390 intron vn - chr3L 5836437 intron vn - chr3L 5836484 intron vn - chr3L_12_5835001 chr3L_5835001 KN35_1-HE 1552 chr3L 5871683 5871712 chr3L 5871909 5871929 15 224 4.0 7.0 5.5 2.3 246 chr3L 5871683 exon CG5568 + chr3L 5871806 intron CG5568 + chr3L 5871929 exon CG5568 + chr3L_15_5870001 chr3L_5870001 KN35_1-HE 1553 chr3L 5872725 5872756 chr3L 5873055 5873086 15 330 5.5 2.0 3.8 3.1 361 chr3L 5872725 exon CG5568 + chr3L 5872906 exon CG5568 + chr3L 5873086 exon CG5568 + chr3L_15_5870001 chr3L_5870001 KN35_1-HE 1554 chr3L 5907722 5907737 chr3L 5907814 5907829 8 92 0.0 9.5 4.8 1.4 107 chr3L 5907722 5` UTR CG13288 + chr3L 5907776 5` UTR CG13288 + chr3L 5907829 exon CG13288 + chr3L_8_5905001 chr3L_5905001 KN35_1-HE 1555 chr3L 5910033 5910053 chr3L 5910275 5910295 pogo 10 242 4.5 4.0 4.2 1.9 262 chr3L 5910033 intron CG13288 + chr3L 5910164 intron CG13288 + chr3L 5910295 intron CG13288 + chr3L_10_5910001 chr3L_5910001 KN35_1-HE 1556 chr3L 5926315 5926349 chr3L 5926506 5926540 BS 13 191 6.5 5.0 5.8 1.9 225 chr3L 5926315 intron Vap-33B + chr3L 5926428 intron Vap-33B + chr3L 5926540 intron Vap-33B + chr3L_13_5925001 chr3L_5925001 KN35_1-HE 1557 chr3L 5949414 5949443 chr3L 5949506 5949535 12 92 0.5 5.5 3.0 3.0 121 chr3L 5949414 intron CG33993 - chr3L 5949474 intron CG33993 - chr3L 5949535 intron CG33993 - chr3L_12_5945001 chr3L_5945001 KN35_1-HE 1558 chr3L 5952039 5952061 chr3L 5952141 5952163 8 102 4.0 4.0 4.0 1.6 124 chr3L 5952039 intergenic not near genes chr3L 5952101 intergenic not near genes chr3L 5952163 intergenic not near genes chr3L_8_5950001 chr3L_5950001 KN35_1-HE 1559 chr3L 5993868 5993903 chr3L 5993954 5993983 24 85 7.0 6.0 6.5 3.2 115 chr3L 5993868 intergenic not near genes chr3L 5993926 intergenic not near genes chr3L 5993983 intergenic not near genes chr3L_24_5990001 chr3L_5990001 KN35_1-HE 1560 chr3L 6001678 6001717 chr3L 6004379 6004418 jockey 18 2701 7.5 1.0 4.2 3.5 2740 chr3L 6001678 intron PVRAP + chr3L 6003048 intron PVRAP + chr3L 6004418 intron PVRAP + chr3L_18_6000001 chr3L_6000001 KN35_1-HE 1561 chr3L 6005625 6005660 chr3L 6005714 6005749 29 89 6.0 6.0 6.0 4.1 124 chr3L 6005625 intron PVRAP + chr3L 6005687 intron PVRAP + chr3L 6005749 intron PVRAP + chr3L_29_6005001 chr3L_6005001 KN35_1-HE 1562 chr3L 6040364 6040390 chr3L 6042721 6042747 Doc 13 2357 7.0 5.0 6.0 1.9 2383 chr3L 6040364 intergenic Jon65Aiv + chr3L 6041556 intergenic not near genes chr3L 6042747 intergenic not near genes chr3L_13_6040001 chr3L_6040001 KN35_1-HE 1563 chr3L 6077781 6077788 chr3L 6077862 6077869 8 81 9.5 0.0 4.8 1.4 88 chr3L 6077781 intron ssp6 + chr3L 6077825 intron ssp6 + chr3L 6077869 intron ssp6 + chr3L_8_6075001 chr3L_6075001 KN35_1-HE 1564 chr3L 6220912 6220948 chr3L 6230065 6230101 roo 13 9153 2.0 3.0 2.5 3.7 9189 chr3L 6220912 5` UTR pncr008:3L + chr3L 6225506 intergenic not near genes chr3L 6230101 intergenic not near genes chr3L_13_6225001 chr3L_6225001 KN35_1-HE 1565 chr3L 6278043 6278222 chr3L 6278121 6278299 7 77 10.5 3.5 7.0 0.9 256 chr3L 6278043 intergenic not near genes chr3L 6278171 intergenic not near genes chr3L 6278299 intergenic not near genes chr3L_7_6275001 chr3L_6275001 KN35_1-HE 1566 chr3L 6335008 6335042 chr3L 6335480 6335514 297 18 472 5.0 7.0 6.0 2.6 506 chr3L 6335008 intron CG13300 - chr3L 6335261 intron CG13300 - chr3L 6335514 intron CG13300 - chr3L_18_6335001 chr3L_6335001 KN35_1-HE 1567 chr3L 6353378 6353409 chr3L 6353459 6353490 19 77 1.0 5.0 3.0 4.8 112 chr3L 6353378 intergenic not near genes chr3L 6353434 intergenic not near genes chr3L 6353490 intergenic not near genes chr3L_19_6350001 chr3L_6350001 KN35_1-HE 1568 chr3L 6358621 6358652 chr3L 6358699 6358730 27 78 8.5 7.0 7.8 3.1 109 chr3L 6358621 intergenic not near genes chr3L 6358676 intergenic not near genes chr3L 6358730 intergenic not near genes chr3L_27_6355001 chr3L_6355001 KN35_1-HE 1569 chr3L 6405656 6405691 chr3L 6432121 6432156 roo 13 26465 7.5 6.5 7.0 1.6 26500 chr3L 6405656 intron CG42747 + chr3L 6418906 intron CG42747 + chr3L 6432156 intron CG42747 + chr3L_13_6415001 chr3L_6415001 KN35_1-HE 1570 chr3L 6511535 6511549 chr3L 6511616 6511630 9 81 2.5 5.5 4.0 1.8 95 chr3L 6511535 intron sfl + chr3L 6511582 intron sfl + chr3L 6511630 intron sfl + chr3L_9_6510001 chr3L_6510001 KN35_1-HE 1571 chr3L 6615015 6615046 chr3L 6615101 6615132 13 85 2.0 3.5 2.8 3.4 117 chr3L 6615015 intron CG8398 + chr3L 6615074 intron CG8398 + chr3L 6615132 intron CG8398 + chr3L_13_6615001 chr3L_6615001 KN35_1-HE 1572 chr3L 6704068 6704097 chr3L 6704154 6704183 14 86 2.5 6.5 4.5 2.5 115 chr3L 6704068 intergenic not near genes chr3L 6704126 intergenic not near genes chr3L 6704183 intergenic not near genes chr3L_14_6700001 chr3L_6700001 KN35_1-HE 1573 chr3L 6765438 6765470 chr3L 6765522 6765554 16 84 5.5 8.5 7.0 2.0 116 chr3L 6765438 intergenic not near genes chr3L 6765496 intergenic not near genes chr3L 6765554 intergenic not near genes chr3L_16_6765001 chr3L_6765001 KN35_1-HE 1574 chr3L 6781120 6781150 chr3L 6783134 6783164 Doc 9 2014 7.5 4.0 5.8 1.3 2044 chr3L 6781120 intergenic not near genes chr3L 6782142 intergenic not near genes chr3L 6783164 intergenic not near genes chr3L_9_6780001 chr3L_6780001 KN35_1-HE 1575 chr3L 6816744 6816778 chr3L 6817106 6817140 10 362 5.0 6.0 5.5 1.5 396 chr3L 6816744 intergenic not near genes chr3L 6816942 intergenic not near genes chr3L 6817140 intergenic not near genes chr3L_10_6815001 chr3L_6815001 KN35_1-HE 1576 chr3L 6829151 6829182 chr3L 6829242 6829273 6 91 5.0 0.5 2.8 1.6 122 chr3L 6829151 intergenic not near genes chr3L 6829212 intergenic not near genes chr3L 6829273 intergenic not near genes chr3L_6_6825001 chr3L_6825001 KN35_1-HE 1577 chr3L 6855933 6855954 chr3L 6860718 6860739 Doc 11 4784 8.0 3.5 5.8 1.6 4806 chr3L 6855933 intergenic not near genes chr3L 6858336 intergenic not near genes chr3L 6860739 intergenic not near genes chr3L_11_6855001 chr3L_6855001 KN35_1-HE 1578 chr3L 6887515 6887551 chr3L 6895008 6895044 roo 26 7493 3.5 1.5 2.5 7.4 7529 chr3L 6887515 intergenic not near genes chr3L 6891280 intergenic not near genes chr3L 6895044 intergenic not near genes chr3L_26_6890001 chr3L_6890001 KN35_1-HE 1579 chr3L 6922323 6922336 chr3L 6922502 6922515 7 179 26.5 37.0 31.8 0.2 192 chr3L 6922323 intergenic not near genes chr3L 6922419 intergenic not near genes chr3L 6922515 intergenic not near genes chr3L_7_6920001 chr3L_6920001 KN35_1-HE 1580 chr3L 6930328 6930333 chr3L 6930406 6930411 4 78 5.0 0.0 2.5 1.1 83 chr3L 6930328 intergenic not near genes chr3L 6930370 intergenic not near genes chr3L 6930411 intergenic not near genes chr3L_4_6930001 chr3L_6930001 KN35_1-HE 1581 chr3L 6994887 6994917 chr3L 6995499 6995529 BS 14 612 1.0 8.5 4.8 2.4 642 chr3L 6994887 intergenic bin + chr3L 6995208 intergenic not near genes chr3L 6995529 intergenic not near genes chr3L_14_6995001 chr3L_6995001 KN35_1-HE 1582 chr3L 7000369 7000385 chr3L 7000522 7000538 7 153 0.0 5.0 2.5 2.0 169 chr3L 7000369 intron Mp + chr3L 7000454 intron Mp + chr3L 7000538 intron Mp + chr3L_7_7000001 chr3L_7000001 KN35_1-HE 1583 chr3L 7001719 7001754 chr3L 7001813 7001869 9 99 2.0 0.0 1.0 4.5 150 chr3L 7001719 intron Mp + chr3L 7001794 intron Mp + chr3L 7001869 intron Mp + chr3L_9_7000001 chr3L_7000001 KN35_1-HE 1584 chr3L 7007378 7007411 chr3L 7007480 7007513 11 102 3.0 2.0 2.5 3.1 135 chr3L 7007378 intron Mp + chr3L 7007446 intron Mp + chr3L 7007513 intron Mp + chr3L_11_7005001 chr3L_7005001 KN35_1-HE 1585 chr3L 7024403 7024421 chr3L 7024487 7024505 12 84 2.5 5.0 3.8 2.5 102 chr3L 7024403 intron Mp + chr3L 7024454 intron Mp + chr3L 7024505 intron Mp + chr3L_12_7020001 chr3L_7020001 KN35_1-HE 1586 chr3L 7079607 7079636 chr3L 7079685 7079714 17 78 6.0 3.5 4.8 2.9 107 chr3L 7079607 intergenic not near genes chr3L 7079660 intergenic not near genes chr3L 7079714 intergenic not near genes chr3L_17_7075001 chr3L_7075001 KN35_1-HE 1587 chr3L 7090921 7090944 chr3L 7091006 7091029 18 85 3.5 4.5 4.0 3.6 108 chr3L 7090921 intergenic not near genes chr3L 7090975 intergenic not near genes chr3L 7091029 intergenic not near genes chr3L_18_7090001 chr3L_7090001 KN35_1-HE 1588 chr3L 7112593 7112613 chr3L 7112681 7112701 14 88 7.0 9.5 8.2 1.5 108 chr3L 7112593 intron form3 + chr3L 7112647 intron form3 + chr3L 7112701 intron form3 + chr3L_14_7110001 chr3L_7110001 KN35_1-HE 1589 chr3L 7129952 7129987 chr3L 7130145 7130180 BS 9 193 3.5 1.0 2.2 2.8 228 chr3L 7129952 intergenic CG15829 + chr3L 7130066 intergenic CG15829 + chr3L 7130180 intergenic not near genes chr3L_9_7130001 chr3L_7130001 KN35_1-HE 1590 chr3L 7150017 7150044 chr3L 7150097 7150124 9 80 0.0 5.0 2.5 2.6 107 chr3L 7150017 intron corn - chr3L 7150070 intron corn - chr3L 7150124 intron corn - chr3L_9_7150001 chr3L_7150001 KN35_1-HE 1591 chr3L 7154897 7154934 chr3L 7155015 7155052 19 118 6.5 1.5 4.0 3.8 155 chr3L 7154897 intron corn - chr3L 7154974 intron corn - chr3L 7155052 intron corn - chr3L_19_7150001 chr3L_7150001 KN35_1-HE 1592 chr3L 7176580 7176610 chr3L 7176729 7176759 12 149 7.5 10.0 8.8 1.2 179 chr3L 7176580 intron Dscam2 - chr3L 7176670 intron Dscam2 - chr3L 7176759 intron Dscam2 - chr3L_12_7175001 chr3L_7175001 KN35_1-HE 1593 chr3L 7192330 7192349 chr3L 7192419 7192438 17 89 8.5 5.0 6.8 2.2 108 chr3L 7192330 intergenic not near genes chr3L 7192384 intergenic not near genes chr3L 7192438 intergenic not near genes chr3L_17_7190001 chr3L_7190001 KN35_1-HE 1594 chr3L 7229212 7229245 chr3L 7229306 7229339 8 94 2.5 1.5 2.0 2.7 127 chr3L 7229212 intergenic not near genes chr3L 7229276 intergenic not near genes chr3L 7229339 intergenic not near genes chr3L_8_7225001 chr3L_7225001 KN35_1-HE 1595 chr3L 7233346 7233350 chr3L 7233428 7233432 4 82 1.5 1.5 1.5 1.6 86 chr3L 7233346 intergenic not near genes chr3L 7233389 intergenic not near genes chr3L 7233432 intergenic not near genes chr3L_4_7230001 chr3L_7230001 KN35_1-HE 1596 chr3L 7262499 7262522 chr3L 7262598 7262621 8 99 1.5 0.0 0.8 4.4 122 chr3L 7262499 intron CG14830 - chr3L 7262560 intron CG14830 - chr3L 7262621 intron CG14830 - chr3L_8_7260001 chr3L_7260001 KN35_1-HE 1597 chr3L 7274726 7274741 chr3L 7274831 7274838 9 104 3.5 2.0 2.8 2.4 112 chr3L 7274726 intron unc-13-4A - chr3L 7274782 intron unc-13-4A - chr3L 7274838 intron unc-13-4A - chr3L_9_7270001 chr3L_7270001 KN35_1-HE 1598 chr3L 7284431 7284455 chr3L 7284508 7284532 5 77 0.0 0.0 0.0 5.0 101 chr3L 7284431 intron unc-13-4A - chr3L 7284482 intron unc-13-4A - chr3L 7284532 intron unc-13-4A - chr3L_5_7280001 chr3L_7280001 KN35_1-HE 1599 chr3L 7285325 7285352 chr3L 7285438 7285465 17 113 3.5 4.0 3.8 3.5 140 chr3L 7285325 intron unc-13-4A - chr3L 7285395 intron unc-13-4A - chr3L 7285465 intron unc-13-4A - chr3L_17_7285001 chr3L_7285001 KN35_1-HE 1600 chr3L 7377313 7377343 chr3L 7380419 7380449 297 8 3106 5.5 2.5 4.0 1.6 3136 chr3L 7377313 intron SMSr - chr3L 7378881 intron SMSr - chr3L 7380449 intron SMSr - chr3L_8_7375001 chr3L_7375001 KN35_1-HE 1601 chr3L 7403612 7403646 chr3L 7403691 7403724 7 78 4.0 2.0 3.0 1.8 112 chr3L 7403612 exon CG8560 - chr3L 7403668 intron CG8560 - chr3L 7403724 intron CG8560 - chr3L_7_7400001 chr3L_7400001 KN35_1-HE 1602 chr3L 7430558 7430592 chr3L 7430647 7430681 20 89 2.5 6.0 4.2 3.8 123 chr3L 7430558 intron CG42458 + chr3L 7430620 intron CG42458 + chr3L 7430681 intron CG42458 + chr3L_20_7430001 chr3L_7430001 KN35_1-HE 1603 chr3L 7439398 7439404 chr3L 7440780 7440786 7 1382 16.0 22.5 19.2 0.3 1388 chr3L 7439398 intron,exon CG42458 +,sphinx1 - chr3L 7440092 intron,exon CG42458 +,sphinx2 - chr3L 7440786 intron CG42458 + chr3L_7_7440001 chr3L_7440001 KN35_1-HE 1604 chr3L 7444019 7444048 chr3L 7444118 7444148 11 100 3.0 0.0 1.5 4.4 129 chr3L 7444019 intron CG42458 + chr3L 7444084 intron CG42458 + chr3L 7444148 intron CG42458 + chr3L_11_7440001 chr3L_7440001 KN35_1-HE 1605 chr3L 7480056 7480060 chr3L 7480146 7480150 5 90 8.0 0.0 4.0 1.0 94 chr3L 7480056 intergenic not near genes chr3L 7480103 intergenic not near genes chr3L 7480150 intergenic not near genes chr3L_5_7480001 chr3L_7480001 KN35_1-HE 1606 chr3L 7498756 7498782 chr3L 7503534 7503560 F-element 12 4778 8.0 4.5 6.2 1.7 4804 chr3L 7498756 5` UTR CG8539 - chr3L 7501158 intergenic not near genes chr3L 7503560 intergenic not near genes chr3L_12_7500001 chr3L_7500001 KN35_1-HE 1607 chr3L 7505431 7505433 chr3L 7505508 7505510 4 77 0.0 7.0 3.5 0.9 79 chr3L 7505431 intergenic CG7548 - chr3L 7505470 intergenic CG7548 - chr3L 7505510 intergenic CG7548 - chr3L_4_7505001 chr3L_7505001 KN35_1-HE 1608 chr3L 7505792 7505795 chr3L 7505882 7505885 4 90 37.0 6.5 21.8 0.2 93 chr3L 7505792 exon CG7548 - chr3L 7505838 exon CG7548 - chr3L 7505885 exon CG7548 - chr3L_4_7505001 chr3L_7505001 KN35_1-HE 1609 chr3L 7524149 7524169 chr3L 7524247 7524267 7 98 4.0 6.0 5.0 1.2 118 chr3L 7524149 intron ltl + chr3L 7524208 intron ltl + chr3L 7524267 intron ltl + chr3L_7_7520001 chr3L_7520001 KN35_1-HE 1610 chr3L 7542605 7542621 chr3L 7542690 7542706 8 85 3.0 3.0 3.0 2.0 101 chr3L 7542605 intergenic CG32376 - chr3L 7542656 intergenic CG32376 - chr3L 7542706 intergenic CG32376 - chr3L_8_7540001 chr3L_7540001 KN35_1-HE 1611 chr3L 7574851 7574859 chr3L 7574929 7574937 7 78 0.0 0.0 0.0 7.0 86 chr3L 7574851 intergenic not near genes chr3L 7574894 intergenic not near genes chr3L 7574937 intergenic not near genes chr3L_7_7570001 chr3L_7570001 KN35_1-HE 1612 chr3L 7581711 7581722 chr3L 7581902 7581913 6 190 3.5 3.0 3.2 1.4 202 chr3L 7581711 intergenic not near genes chr3L 7581812 intergenic not near genes chr3L 7581913 intergenic not near genes chr3L_6_7580001 chr3L_7580001 KN35_1-HE 1613 chr3L 7605355 7605388 chr3L 7605434 7605467 18 79 5.5 5.0 5.2 2.9 112 chr3L 7605355 intron CG33275 + chr3L 7605411 intron CG33275 + chr3L 7605467 intron CG33275 + chr3L_18_7605001 chr3L_7605001 KN35_1-HE 1614 chr3L 7751854 7751883 chr3L 7751946 7751975 12 91 1.5 5.5 3.5 2.7 121 chr3L 7751854 intron CG32373 + chr3L 7751914 intron CG32373 + chr3L 7751975 intron CG32373 + chr3L_12_7750001 chr3L_7750001 KN35_1-HE 1615 chr3L 7769291 7769320 chr3L 7769386 7769415 20 95 0.0 4.5 2.2 6.2 124 chr3L 7769291 intron Clk - chr3L 7769353 intron Clk - chr3L 7769415 intron Clk - chr3L_20_7765001 chr3L_7765001 KN35_1-HE 1616 chr3L 7789725 7789751 chr3L 7789908 7789934 9 183 3.5 4.5 4.0 1.8 209 chr3L 7789725 intron CG32369 - chr3L 7789830 intron CG32369 - chr3L 7789934 intron CG32369 - chr3L_9_7785001 chr3L_7785001 KN35_1-HE 1617 chr3L 7793713 7793744 chr3L 7800766 7800797 297 17 7053 7.0 5.0 6.0 2.4 7084 chr3L 7793713 intron CG32369 - chr3L 7797255 intron CG32369 - chr3L 7800797 intron CG32369 - chr3L_17_7795001 chr3L_7795001 KN35_1-HE 1618 chr3L 7800808 7800844 chr3L 7800888 7800924 20 80 6.5 4.5 5.5 3.1 116 chr3L 7800808 intron CG32369 - chr3L 7800866 intron CG32369 - chr3L 7800924 intron CG32369 - chr3L_20_7800001 chr3L_7800001 KN35_1-HE 1619 chr3L 7845383 7845405 chr3L 7845467 7845489 15 84 10.5 1.5 6.0 2.1 106 chr3L 7845383 intron Pdp1 - chr3L 7845436 intron Pdp1 - chr3L 7845489 intron Pdp1 - chr3L_15_7845001 chr3L_7845001 KN35_1-HE 1620 chr3L 7886515 7886547 chr3L 7889034 7889066 Stalker4 13 2519 2.5 2.5 2.5 3.7 2551 chr3L 7886515 intron CG32365 + chr3L 7887790 intron CG32365 + chr3L 7889066 intron CG32365 + chr3L_13_7885001 chr3L_7885001 KN35_1-HE 1621 chr3L 7916829 7916861 chr3L 7926001 7926033 roo 9 9172 4.0 5.5 4.8 1.6 9204 chr3L 7916829 3` UTR syd - chr3L 7921431 intron syd - chr3L 7926033 3` UTR syd - chr3L_9_7920001 chr3L_7920001 KN35_1-HE 1622 chr3L 7985364 7985398 chr3L 7987693 7987727 NOF 12 2328 3.5 2.5 3.0 3.0 2363 chr3L 7985364 intron nmo + chr3L 7986546 intron nmo + chr3L 7987727 intron nmo + chr3L_12_7985001 chr3L_7985001 KN35_1-HE 1623 chr3L 8012641 8012648 chr3L 8012733 8012740 4 92 0.0 9.0 4.5 0.7 99 chr3L 8012641 intron nmo + chr3L 8012690 intron nmo + chr3L 8012740 intron nmo + chr3L_4_8010001 chr3L_8010001 KN35_1-HE 1624 chr3L 8019705 8019730 chr3L 8024118 8024141 NOF 10 4411 3.0 6.0 4.5 1.8 4436 chr3L 8019705 intron nmo + chr3L 8021923 intron nmo + chr3L 8024141 intron nmo + chr3L_10_8020001 chr3L_8020001 KN35_1-HE 1625 chr3L 8062851 8062857 chr3L 8062931 8062937 5 80 5.5 7.0 6.2 0.7 86 chr3L 8062851 intergenic not near genes chr3L 8062894 intergenic not near genes chr3L 8062937 intergenic not near genes chr3L_5_8060001 chr3L_8060001 KN35_1-HE 1626 chr3L 8075360 8075381 chr3L 8075447 8075463 12 87 4.0 0.0 2.0 4.0 103 chr3L 8075360 intron Ect4 + chr3L 8075412 intron Ect4 + chr3L 8075463 intron Ect4 + chr3L_12_8075001 chr3L_8075001 KN35_1-HE 1627 chr3L 8081281 8081308 chr3L 8081385 8081412 14 104 3.0 7.0 5.0 2.3 131 chr3L 8081281 intron Ect4 + chr3L 8081346 intron Ect4 + chr3L 8081412 intron Ect4 + chr3L_14_8080001 chr3L_8080001 KN35_1-HE 1628 chr3L 8225977 8225994 chr3L 8226066 8226083 7 89 6.5 3.5 5.0 1.2 106 chr3L 8225977 intergenic not near genes chr3L 8226030 intergenic not near genes chr3L 8226083 intergenic not near genes chr3L_7_8225001 chr3L_8225001 KN35_1-HE 1629 chr3L 8225997 8226011 chr3L 8226063 8226100 9 86 4.0 3.0 3.5 2.0 103 chr3L 8225997 intergenic not near genes chr3L 8226048 intergenic not near genes chr3L 8226100 intergenic not near genes chr3L_9_8225001 chr3L_8225001 KN35_1-HE 1630 chr3L 8273053 8273082 chr3L 8273153 8273182 16 100 5.0 3.0 4.0 3.2 129 chr3L 8273053 intron Dscam4 + chr3L 8273118 intron Dscam4 + chr3L 8273182 exon Dscam4 + chr3L_16_8270001 chr3L_8270001 KN35_1-HE 1631 chr3L 8305519 8305522 chr3L 8307407 8307426 4 1906 2.5 4.0 3.2 1.0 1907 chr3L 8305519 exon Gr66a - chr3L 8306472 exon Gr66a - chr3L 8307426 intron BI-1 - chr3L_4_8305001 chr3L_8305001 KN35_1-HE 1632 chr3L 8364524 8364536 chr3L 8364616 8364628 8 92 10.5 2.0 6.2 1.1 104 chr3L 8364524 intergenic not near genes chr3L 8364576 intergenic not near genes chr3L 8364628 intergenic not near genes chr3L_8_8360001 chr3L_8360001 KN35_1-HE 1633 chr3L 8382432 8382458 chr3L 8382509 8382535 17 77 2.5 6.0 4.2 3.3 103 chr3L 8382432 intron ImpE1 + chr3L 8382484 intron ImpE1 + chr3L 8382535 intron ImpE1 + chr3L_17_8380001 chr3L_8380001 KN35_1-HE 1634 chr3L 8394027 8394057 chr3L 8394104 8394134 7 77 1.5 4.5 3.0 1.8 107 chr3L 8394027 intergenic Jon66Cii - chr3L 8394080 intergenic Jon66Cii - chr3L 8394134 intergenic Jon66Cii - chr3L_7_8390001 chr3L_8390001 KN35_1-HE 1635 chr3L 8445725 8445732 chr3L 8445802 8445809 4 77 2.0 5.0 3.5 0.9 84 chr3L 8445725 intron CG6983 - chr3L 8445767 intron CG6983 - chr3L 8445809 intron CG6983 - chr3L_4_8445001 chr3L_8445001 KN35_1-HE 1636 chr3L 8451391 8451412 chr3L 8451470 8451491 13 79 3.0 8.0 5.5 2.0 100 chr3L 8451391 intron Gug + chr3L 8451441 intron Gug + chr3L 8451491 intron Gug + chr3L_13_8450001 chr3L_8450001 KN35_1-HE 1637 chr3L 8456474 8456488 chr3L 8456570 8456573 9 95 9.0 16.5 12.8 0.7 99 chr3L 8456474 intron Gug + chr3L 8456524 intron Gug + chr3L 8456573 intron Gug + chr3L_9_8455001 chr3L_8455001 KN35_1-HE 1638 chr3L 8481800 8481806 chr3L 8490960 8490966 roo 5 9160 2.0 1.5 1.8 1.8 9166 chr3L 8481800 intron CG43163 - chr3L 8486383 intron CG43163 - chr3L 8490966 intron CG43163 - chr3L_5_8485001 chr3L_8485001 KN35_1-HE 1639 chr3L 8498295 8498329 chr3L 8505763 8505797 blood 6 7468 3.0 4.0 3.5 1.3 7502 chr3L 8498295 intron CG43163 - chr3L 8502046 intron CG43163 - chr3L 8505797 intron CG43163 - chr3L_6_8500001 chr3L_8500001 KN35_1-HE 1640 chr3L 8541449 8541482 chr3L 8541537 8541570 16 88 5.0 2.0 3.5 3.6 121 chr3L 8541449 intergenic not near genes chr3L 8541510 intergenic not near genes chr3L 8541570 intergenic not near genes chr3L_16_8540001 chr3L_8540001 KN35_1-HE 1641 chr3L 8558665 8558693 chr3L 8558757 8558785 20 92 4.0 6.5 5.2 3.2 120 chr3L 8558665 intron rhea + chr3L 8558725 intron rhea + chr3L 8558785 intron rhea + chr3L_20_8555001 chr3L_8555001 KN35_1-HE 1642 chr3L 8582944 8582974 chr3L 8583026 8583055 5 81 3.0 0.0 1.5 2.0 111 chr3L 8582944 intron CG43078 + chr3L 8583000 intron CG43078 + chr3L 8583055 intron CG43078 + chr3L_5_8580001 chr3L_8580001 KN35_1-HE 1643 chr3L 8624086 8624093 chr3L 8624171 8624178 6 85 0.5 0.5 0.5 4.0 92 chr3L 8624086 intergenic GAPsec -,Zasp66 + chr3L 8624132 intergenic GAPsec -,Zasp66 + chr3L 8624178 intergenic Zasp66 +,GAPsec - chr3L_6_8620001 chr3L_8620001 KN35_1-HE 1644 chr3L 8707888 8707906 chr3L 8707975 8707993 7 87 0.0 3.5 1.8 2.5 105 chr3L 8707888 intergenic not near genes chr3L 8707940 intergenic not near genes chr3L 8707993 intergenic not near genes chr3L_7_8705001 chr3L_8705001 KN35_1-HE 1645 chr3L 8791267 8791293 chr3L 8796692 8796718 I-element 15 5425 11.5 0.0 5.8 2.2 5451 chr3L 8791267 exon Fhos + chr3L 8793992 intron Fhos + chr3L 8796718 intron Fhos + chr3L_15_8790001 chr3L_8790001 KN35_1-HE 1646 chr3L 8796794 8796821 chr3L 8796884 8796911 10 90 4.5 7.0 5.8 1.5 117 chr3L 8796794 intron Fhos + chr3L 8796852 intron Fhos + chr3L 8796911 intron Fhos + chr3L_10_8795001 chr3L_8795001 KN35_1-HE 1647 chr3L 8801098 8801133 chr3L 8801282 8801317 13 184 2.0 1.0 1.5 5.2 219 chr3L 8801098 intergenic CG13311 - chr3L 8801208 intergenic CG13311 - chr3L 8801317 intergenic CG13311 - chr3L_13_8800001 chr3L_8800001 KN35_1-HE 1648 chr3L 8832401 8832435 chr3L 8832495 8832529 11 93 6.0 8.0 7.0 1.4 128 chr3L 8832401 intron dally + chr3L 8832465 intron dally + chr3L 8832529 intron dally + chr3L_11_8830001 chr3L_8830001 KN35_1-HE 1649 chr3L 8861531 8861554 chr3L 8861623 8861646 10 92 0.0 2.0 1.0 5.0 115 chr3L 8861531 intron dally + chr3L 8861588 intron dally + chr3L 8861646 intron dally + chr3L_10_8860001 chr3L_8860001 KN35_1-HE 1650 chr3L 8884400 8884421 chr3L 8884600 8884621 12 200 4.0 0.0 2.0 4.0 221 chr3L 8884400 intron dally + chr3L 8884510 intron dally + chr3L 8884621 intron dally + chr3L_12_8880001 chr3L_8880001 KN35_1-HE 1651 chr3L 8905456 8905486 chr3L 8905544 8905574 13 88 4.5 10.5 7.5 1.5 118 chr3L 8905456 intergenic mfr - chr3L 8905515 intergenic mfr - chr3L 8905574 intergenic mfr - chr3L_13_8905001 chr3L_8905001 KN35_1-HE 1652 chr3L 8950545 8950584 chr3L 8950640 8950679 24 95 2.0 3.0 2.5 6.9 134 chr3L 8950545 intron,intron CG43783 -,orb2 - chr3L 8950612 intron,intron CG43783 -,orb2 - chr3L 8950679 intron,intron CG43783 -,orb2 - chr3L_24_8950001 chr3L_8950001 KN35_1-HE 1653 chr3L 8953468 8953503 chr3L 8953552 8953587 7 83 4.0 3.0 3.5 1.6 119 chr3L 8953468 intron CG43783 - chr3L 8953528 intron CG43783 - chr3L 8953587 intron CG43783 - chr3L_7_8950001 chr3L_8950001 KN35_1-HE 1654 chr3L 9036283 9036292 chr3L 9036370 9036379 6 87 9.5 9.0 9.2 0.6 96 chr3L 9036283 intergenic not near genes chr3L 9036331 intergenic not near genes chr3L 9036379 intergenic not near genes chr3L_6_9035001 chr3L_9035001 KN35_1-HE 1655 chr3L 9042541 9042564 chr3L 9042620 9042643 12 79 6.5 5.0 5.8 1.8 102 chr3L 9042541 intron Doc1 + chr3L 9042592 intron Doc1 + chr3L 9042643 intron Doc1 + chr3L_12_9040001 chr3L_9040001 KN35_1-HE 1656 chr3L 9076927 9076957 chr3L 9084488 9084518 412 18 7560 7.5 4.0 5.8 2.6 7591 chr3L 9076927 exon Tequila + chr3L 9080722 intron Tequila + chr3L 9084518 exon Tequila + chr3L_18_9080001 chr3L_9080001 KN35_1-HE 1657 chr3L 9103625 9103656 chr3L 9103711 9103742 9 86 5.0 1.5 3.2 2.1 117 chr3L 9103625 intron bol - chr3L 9103684 intron bol - chr3L 9103742 intron bol - chr3L_9_9100001 chr3L_9100001 KN35_1-HE 1658 chr3L 9130557 9130582 chr3L 9134319 9134344 412 9 3762 6.0 4.0 5.0 1.5 3787 chr3L 9130557 intergenic bol - chr3L 9132450 intergenic not near genes chr3L 9134344 intergenic Dhpr + chr3L_9_9130001 chr3L_9130001 KN35_1-HE 1659 chr3L 9164695 9164731 chr3L 9166163 9166199 hobo 21 1468 8.0 4.5 6.2 2.9 1504 chr3L 9164695 intron Rdl - chr3L 9165447 intron Rdl - chr3L 9166199 intron Rdl - chr3L_21_9165001 chr3L_9165001 KN35_1-HE 1660 chr3L 9217781 9217813 chr3L 9217862 9217894 21 81 10.0 4.5 7.2 2.6 113 chr3L 9217781 intergenic not near genes chr3L 9217838 intergenic not near genes chr3L 9217894 intergenic not near genes chr3L_21_9215001 chr3L_9215001 KN35_1-HE 1661 chr3L 9219242 9219270 chr3L 9219915 9219943 jockey 23 672 9.5 8.0 8.8 2.3 701 chr3L 9219242 intergenic not near genes chr3L 9219592 intergenic not near genes chr3L 9219943 intergenic not near genes chr3L_23_9215001 chr3L_9215001 KN35_1-HE 1662 chr3L 9230068 9230095 chr3L 9230146 9230173 9 78 5.0 5.0 5.0 1.5 105 chr3L 9230068 intergenic not near genes chr3L 9230120 intergenic not near genes chr3L 9230173 intergenic not near genes chr3L_9_9230001 chr3L_9230001 KN35_1-HE 1663 chr3L 9242141 9242167 chr3L 9242231 9242257 16 90 4.5 5.0 4.8 2.8 116 chr3L 9242141 intergenic not near genes chr3L 9242199 intergenic not near genes chr3L 9242257 intergenic not near genes chr3L_16_9240001 chr3L_9240001 KN35_1-HE 1664 chr3L 9245715 9245752 chr3L 9246208 9246243 6 491 3.5 2.0 2.8 1.6 528 chr3L 9245715 intergenic not near genes chr3L 9245979 intergenic not near genes chr3L 9246243 intergenic not near genes chr3L_6_9245001 chr3L_9245001 KN35_1-HE 1665 chr3L 9312725 9312732 chr3L 9312802 9312810 9 78 7.0 3.5 5.2 1.5 85 chr3L 9312725 intergenic not near genes chr3L 9312768 intergenic not near genes chr3L 9312810 intergenic not near genes chr3L_9_9310001 chr3L_9310001 KN35_1-HE 1666 chr3L 9348466 9348488 chr3L 9348969 9348991 12 503 5.5 0.0 2.8 3.2 525 chr3L 9348466 intergenic PGRP-LC + chr3L 9348728 intergenic PGRP-LC + chr3L 9348991 intergenic not near genes chr3L_12_9345001 chr3L_9345001 KN35_1-HE 1667 chr3L 9350269 9350287 chr3L 9350348 9350366 7 79 5.0 6.0 5.5 1.1 97 chr3L 9350269 intron PGRP-LF + chr3L 9350318 intron PGRP-LF + chr3L 9350366 intron PGRP-LF + chr3L_7_9350001 chr3L_9350001 KN35_1-HE 1668 chr3L 9443509 9443539 chr3L 9445301 9445331 S-element 13 1792 2.5 2.5 2.5 3.7 1822 chr3L 9443509 intron CG33926 + chr3L 9444420 intron CG33926 + chr3L 9445331 intron CG33926 + chr3L_13_9440001 chr3L_9440001 KN35_1-HE 1669 chr3L 9501703 9501730 chr3L 9502187 9502214 roo 4 484 0.5 1.5 1.0 2.0 511 chr3L 9501703 intron path - chr3L 9501958 intron path - chr3L 9502214 intron path - chr3L_4_9500001 chr3L_9500001 KN35_1-HE 1670 chr3L 9502605 9502625 chr3L 9502691 9502711 10 86 0.5 3.0 1.8 3.6 106 chr3L 9502605 intron path - chr3L 9502658 intron path - chr3L 9502711 intron path - chr3L_10_9500001 chr3L_9500001 KN35_1-HE 1671 chr3L 9510909 9510956 chr3L 9511003 9511036 5 83 0.0 4.0 2.0 1.7 127 chr3L 9510909 intron RpS9 - chr3L 9510972 intron RpS9 - chr3L 9511036 intron RpS9 - chr3L_5_9510001 chr3L_9510001 KN35_1-HE 1672 chr3L 9532484 9532512 chr3L 9532581 9532609 13 97 1.0 2.0 1.5 5.2 125 chr3L 9532484 intergenic not near genes chr3L 9532546 intergenic not near genes chr3L 9532609 intergenic not near genes chr3L_13_9530001 chr3L_9530001 KN35_1-HE 1673 chr3L 9533758 9533782 chr3L 9541319 9541343 412 10 7560 7.0 7.5 7.2 1.2 7585 chr3L 9533758 intergenic not near genes chr3L 9537550 intergenic not near genes chr3L 9541343 intergenic not near genes chr3L_10_9535001 chr3L_9535001 KN35_1-HE 1674 chr3L 9559046 9559059 chr3L 9559165 9559178 6 119 3.5 5.0 4.2 1.2 132 chr3L 9559046 intron CG42673 + chr3L 9559112 intron CG42673 + chr3L 9559178 intron CG42673 + chr3L_6_9555001 chr3L_9555001 KN35_1-HE 1675 chr3L 9571901 9571937 chr3L 9572250 9572286 jockey 26 349 6.0 7.0 6.5 3.5 385 chr3L 9571901 intron CG42673 + chr3L 9572094 intron CG42673 + chr3L 9572286 intron CG42673 + chr3L_26_9570001 chr3L_9570001 KN35_1-HE 1676 chr3L 9572296 9572335 chr3L 9572376 9572415 8 80 3.5 1.5 2.5 2.3 119 chr3L 9572296 intron CG42673 + chr3L 9572356 intron CG42673 + chr3L 9572415 intron CG42673 + chr3L_8_9570001 chr3L_9570001 KN35_1-HE 1677 chr3L 9575905 9575942 chr3L 9580986 9581023 jockey 19 5081 9.0 5.0 7.0 2.4 5118 chr3L 9575905 intron CG42673 + chr3L 9578464 intron CG42673 + chr3L 9581023 intron CG42673 + chr3L_19_9575001 chr3L_9575001 KN35_1-HE 1678 chr3L 9594230 9594256 chr3L 9594312 9594338 14 82 8.5 5.5 7.0 1.8 108 chr3L 9594230 intron CG42673 + chr3L 9594284 intron CG42673 + chr3L 9594338 intron CG42673 + chr3L_14_9590001 chr3L_9590001 KN35_1-HE 1679 chr3L 9715621 9715627 chr3L 9715699 9715705 4 78 2.5 5.5 4.0 0.8 84 chr3L 9715621 intron vsg + chr3L 9715663 intron vsg + chr3L 9715705 intron vsg + chr3L_4_9715001 chr3L_9715001 KN35_1-HE 1680 chr3L 9738615 9738638 chr3L 9738819 9738842 12 204 4.5 1.0 2.8 3.2 227 chr3L 9738615 intron CG42268 - chr3L 9738728 intron CG42268 - chr3L 9738842 intron CG42268 - chr3L_12_9735001 chr3L_9735001 KN35_1-HE 1681 chr3L 9741622 9741723 chr3L 9741715 9741833 12 109 0.0 0.0 0.0 12.0 211 chr3L 9741622 intron,intron CG42268 -,CR44348 + chr3L 9741728 intron,intron CG42268 -,CR44348 + chr3L 9741833 intron,intron CG42268 -,CR44348 + chr3L_12_9740001 chr3L_9740001 KN35_1-HE 1682 chr3L 9752347 9752381 chr3L 9752428 9752462 22 80 4.0 4.5 4.2 4.2 115 chr3L 9752347 intron CG42268 - chr3L 9752404 intron CG42268 - chr3L 9752462 intron CG42268 - chr3L_22_9750001 chr3L_9750001 KN35_1-HE 1683 chr3L 9835559 9835580 chr3L 9835650 9835671 7 91 3.5 2.0 2.8 1.8 112 chr3L 9835559 intron I-2 - chr3L 9835615 intron I-2 - chr3L 9835671 intron I-2 - chr3L_7_9835001 chr3L_9835001 KN35_1-HE 1684 chr3L 9874142 9874231 chr3L 9874222 9874328 6 107 0.0 0.0 0.0 6.0 186 chr3L 9874142 intergenic not near genes chr3L 9874235 intergenic not near genes chr3L 9874328 intergenic not near genes chr3L_6_9870001 chr3L_9870001 KN35_1-HE 1685 chr3L 9905812 9905818 chr3L 9905989 9905995 4 177 5.5 4.0 4.8 0.7 183 chr3L 9905812 intergenic not near genes chr3L 9905904 intergenic not near genes chr3L 9905995 intergenic not near genes chr3L_4_9905001 chr3L_9905001 KN35_1-HE 1686 chr3L 9929669 9929699 chr3L 9938450 9938480 roo 14 8781 4.0 9.5 6.8 1.8 8811 chr3L 9929669 intron CG34356 + chr3L 9934074 intron CG34356 + chr3L 9938480 intron CG34356 + chr3L_14_9930001 chr3L_9930001 KN35_1-HE 1687 chr3L 9941044 9941059 chr3L 9941124 9941139 7 78 3.0 4.0 3.5 1.6 95 chr3L 9941044 intron CG34356 + chr3L 9941092 intron CG34356 + chr3L 9941139 intron CG34356 + chr3L_7_9940001 chr3L_9940001 KN35_1-HE 1688 chr3L 9976878 9976891 chr3L 9977170 9977183 5 292 0.0 5.0 2.5 1.4 305 chr3L 9976878 intron dpr6 + chr3L 9977030 intron dpr6 + chr3L 9977183 intron dpr6 + chr3L_5_9975001 chr3L_9975001 KN35_1-HE 1689 chr3L 9983969 9984001 chr3L 9984094 9984137 6 129 0.0 0.0 0.0 6.0 168 chr3L 9983969 intron dpr6 + chr3L 9984053 intron dpr6 + chr3L 9984137 intron dpr6 + chr3L_6_9980001 chr3L_9980001 KN35_1-HE 1690 chr3L 9998607 9998631 chr3L 9998684 9998708 9 77 4.0 0.0 2.0 3.0 101 chr3L 9998607 intron dpr6 + chr3L 9998658 intron dpr6 + chr3L 9998708 intron dpr6 + chr3L_9_9995001 chr3L_9995001 KN35_1-HE 1691 chr3L 10019110 10019142 chr3L 10019192 10019224 12 82 5.0 4.5 4.8 2.1 114 chr3L 10019110 intron dpr6 + chr3L 10019167 intron dpr6 + chr3L 10019224 intron dpr6 + chr3L_12_10015001 chr3L_10015001 KN35_1-HE 1692 chr3L 10032551 10032567 chr3L 10032639 10032655 7 88 0.0 5.5 2.8 1.8 104 chr3L 10032551 intron dpr6 + chr3L 10032603 intron dpr6 + chr3L 10032655 intron dpr6 + chr3L_7_10030001 chr3L_10030001 KN35_1-HE 1693 chr3L 10082565 10082573 chr3L 10082648 10082653 4 82 4.0 4.5 4.2 0.8 88 chr3L 10082565 intron dpr6 + chr3L 10082609 intron dpr6 + chr3L 10082653 intron dpr6 + chr3L_4_10080001 chr3L_10080001 KN35_1-HE 1694 chr3L 10096351 10096385 chr3L 10096458 10096492 17 108 45.5 42.5 44.0 0.4 141 chr3L 10096351 intron,exon dpr6 +,CG42825 - chr3L 10096422 intron,exon dpr6 +,CG42825 - chr3L 10096492 intron,exon dpr6 +,CG42825 - chr3L_17_10095001 chr3L_10095001 KN35_1-HE 1695 chr3L 10125628 10125663 chr3L 10125715 10125750 14 87 3.0 4.5 3.8 2.9 122 chr3L 10125628 intron dpr6 + chr3L 10125689 intron dpr6 + chr3L 10125750 intron dpr6 + chr3L_14_10125001 chr3L_10125001 KN35_1-HE 1696 chr3L 10145454 10145478 chr3L 10145532 10145548 14 77 7.0 2.0 4.5 2.5 94 chr3L 10145454 intergenic not near genes chr3L 10145501 intergenic not near genes chr3L 10145548 intergenic not near genes chr3L_14_10145001 chr3L_10145001 KN35_1-HE 1697 chr3L 10161430 10161460 chr3L 10161509 10161540 14 80 0.0 4.0 2.0 4.7 110 chr3L 10161430 intron dpr10 - chr3L 10161485 intron dpr10 - chr3L 10161540 intron dpr10 - chr3L_14_10160001 chr3L_10160001 KN35_1-HE 1698 chr3L 10165665 10165671 chr3L 10165742 10165748 4 77 13.0 0.0 6.5 0.5 83 chr3L 10165665 intron dpr10 - chr3L 10165706 intron dpr10 - chr3L 10165748 intron dpr10 - chr3L_4_10165001 chr3L_10165001 KN35_1-HE 1699 chr3L 10214729 10214824 chr3L 10214817 10214927 14 93 0.0 0.0 0.0 14.0 198 chr3L 10214729 intergenic not near genes chr3L 10214828 intergenic not near genes chr3L 10214927 intergenic not near genes chr3L_14_10210001 chr3L_10210001 KN35_1-HE 1700 chr3L 10300051 10300069 chr3L 10300144 10300162 15 93 4.0 5.0 4.5 2.7 111 chr3L 10300051 intergenic not near genes chr3L 10300106 intergenic not near genes chr3L 10300162 intergenic not near genes chr3L_15_10300001 chr3L_10300001 KN35_1-HE 1701 chr3L 10308737 10308773 chr3L 10308815 10308851 16 78 6.0 8.0 7.0 2.0 114 chr3L 10308737 intergenic not near genes chr3L 10308794 intergenic not near genes chr3L 10308851 intergenic not near genes chr3L_16_10305001 chr3L_10305001 KN35_1-HE 1702 chr3L 10310349 10310383 chr3L 10310447 10310481 21 98 3.0 5.0 4.0 4.2 132 chr3L 10310349 intergenic not near genes chr3L 10310415 intergenic not near genes chr3L 10310481 intergenic not near genes chr3L_21_10310001 chr3L_10310001 KN35_1-HE 1703 chr3L 10314124 10314159 chr3L 10314211 10314246 13 87 5.0 2.5 3.8 2.7 122 chr3L 10314124 intergenic not near genes chr3L 10314185 intergenic not near genes chr3L 10314246 intergenic not near genes chr3L_13_10310001 chr3L_10310001 KN35_1-HE 1704 chr3L 10314483 10314506 chr3L 10314564 10314587 7 81 4.0 4.5 4.2 1.3 104 chr3L 10314483 intergenic not near genes chr3L 10314535 intergenic not near genes chr3L 10314587 intergenic not near genes chr3L_7_10310001 chr3L_10310001 KN35_1-HE 1705 chr3L 10414937 10414974 chr3L 10417310 10417347 Doc 19 2373 0.5 4.0 2.2 5.9 2410 chr3L 10414937 intergenic CG12362 + chr3L 10416142 intergenic not near genes chr3L 10417347 intergenic not near genes chr3L_19_10415001 chr3L_10415001 KN35_1-HE 1706 chr3L 10417566 10417606 chr3L 10417644 10417684 17 78 4.5 5.5 5.0 2.8 118 chr3L 10417566 intergenic not near genes chr3L 10417625 intergenic not near genes chr3L 10417684 intergenic not near genes chr3L_17_10415001 chr3L_10415001 KN35_1-HE 1707 chr3L 10501112 10501129 chr3L 10503260 10503277 4 2148 8.5 4.0 6.2 0.6 2165 chr3L 10501112 intron A2bp1 + chr3L 10502194 intron A2bp1 + chr3L 10503277 intron A2bp1 + chr3L_4_10500001 chr3L_10500001 KN35_1-HE 1708 chr3L 10551458 10551489 chr3L 10551546 10551577 9 88 0.0 5.5 2.8 2.4 119 chr3L 10551458 intron A2bp1 + chr3L 10551518 intron A2bp1 + chr3L 10551577 intron A2bp1 + chr3L_9_10550001 chr3L_10550001 KN35_1-HE 1709 chr3L 10568584 10568619 chr3L 10569116 10569151 38 532 8.0 10.0 9.0 3.8 567 chr3L 10568584 exon A2bp1 + chr3L 10568868 intron A2bp1 + chr3L 10569151 intron A2bp1 + chr3L_38_10565001 chr3L_10565001 KN35_1-HE 1710 chr3L 10600454 10600467 chr3L 10600537 10600550 5 83 3.0 2.0 2.5 1.4 96 chr3L 10600454 intergenic not near genes chr3L 10600502 intergenic not near genes chr3L 10600550 intergenic not near genes chr3L_5_10600001 chr3L_10600001 KN35_1-HE 1711 chr3L 10617284 10617313 chr3L 10617710 10617739 10 426 1.0 5.0 3.0 2.5 455 chr3L 10617284 intergenic not near genes chr3L 10617512 intergenic not near genes chr3L 10617739 intergenic not near genes chr3L_10_10615001 chr3L_10615001 KN35_1-HE 1712 chr3L 10621855 10621877 chr3L 10621943 10621965 6 88 1.0 7.0 4.0 1.2 110 chr3L 10621855 intergenic not near genes chr3L 10621910 intergenic not near genes chr3L 10621965 intergenic not near genes chr3L_6_10620001 chr3L_10620001 KN35_1-HE 1713 chr3L 10658065 10658073 chr3L 10658161 10658169 6 96 0.0 2.5 1.2 2.7 104 chr3L 10658065 intron CG32066 - chr3L 10658117 intron CG32066 - chr3L 10658169 intron CG32066 - chr3L_6_10655001 chr3L_10655001 KN35_1-HE 1714 chr3L 10718329 10718359 chr3L 10718639 10718669 8 310 4.5 3.0 3.8 1.7 340 chr3L 10718329 intergenic not near genes chr3L 10718499 intergenic not near genes chr3L 10718669 intergenic not near genes chr3L_8_10715001 chr3L_10715001 KN35_1-HE 1715 chr3L 10721991 10722014 chr3L 10722074 10722097 6 83 1.0 0.0 0.5 4.0 106 chr3L 10721991 intergenic not near genes chr3L 10722044 intergenic not near genes chr3L 10722097 intergenic not near genes chr3L_6_10720001 chr3L_10720001 KN35_1-HE 1716 chr3L 10729801 10729826 chr3L 10729880 10729905 16 79 8.0 3.0 5.5 2.5 104 chr3L 10729801 intergenic not near genes chr3L 10729853 intergenic not near genes chr3L 10729905 intergenic not near genes chr3L_16_10725001 chr3L_10725001 KN35_1-HE 1717 chr3L 10758797 10758822 chr3L 10758874 10758899 13 77 0.0 3.5 1.8 4.6 102 chr3L 10758797 intergenic not near genes chr3L 10758848 intergenic not near genes chr3L 10758899 intergenic not near genes chr3L_13_10755001 chr3L_10755001 KN35_1-HE 1718 chr3L 10761694 10761726 chr3L 10761775 10761808 7 82 2.5 0.0 1.2 3.2 114 chr3L 10761694 intergenic not near genes chr3L 10761751 intergenic not near genes chr3L 10761808 intergenic not near genes chr3L_7_10760001 chr3L_10760001 KN35_1-HE 1719 chr3L 10762829 10762864 chr3L 10762914 10762923 20 83 4.5 5.0 4.8 3.4 94 chr3L 10762829 intergenic not near genes chr3L 10762876 intergenic not near genes chr3L 10762923 intergenic not near genes chr3L_20_10760001 chr3L_10760001 KN35_1-HE 1720 chr3L 10826026 10826045 chr3L 10826105 10826124 10 79 6.0 8.0 7.0 1.2 98 chr3L 10826026 intergenic CR45246 + chr3L 10826075 intergenic CR45246 + chr3L 10826124 intergenic not near genes chr3L_10_10825001 chr3L_10825001 KN35_1-HE 1721 chr3L 10971523 10971540 chr3L 10971869 10971886 5 346 1.5 6.0 3.8 1.0 363 chr3L 10971523 intergenic not near genes chr3L 10971704 intergenic not near genes chr3L 10971886 intergenic not near genes chr3L_5_10970001 chr3L_10970001 KN35_1-HE 1722 chr3L 10993588 10993616 chr3L 10993696 10993724 8 108 7.0 5.0 6.0 1.1 136 chr3L 10993588 intron klu - chr3L 10993656 intron klu - chr3L 10993724 intron klu - chr3L_8_10990001 chr3L_10990001 KN35_1-HE 1723 chr3L 11042115 11042137 chr3L 11042255 11042277 15 140 13.0 0.0 6.5 2.0 162 chr3L 11042115 intron CG43693 - chr3L 11042196 intron CG43693 - chr3L 11042277 intron CG43693 - chr3L_15_11040001 chr3L_11040001 KN35_1-HE 1724 chr3L 11055053 11055090 chr3L 11055132 11055169 18 79 1.0 5.5 3.2 4.3 116 chr3L 11055053 intron CG7888 + chr3L 11055111 intron CG7888 + chr3L 11055169 intron CG7888 + chr3L_18_11055001 chr3L_11055001 KN35_1-HE 1725 chr3L 11083467 11083482 chr3L 11083571 11083586 6 104 4.5 6.0 5.2 1.0 119 chr3L 11083467 exon JIL-1 - chr3L 11083526 intron JIL-1 - chr3L 11083586 intron JIL-1 - chr3L_6_11080001 chr3L_11080001 KN35_1-HE 1726 chr3L 11087057 11087088 chr3L 11088846 11088878 S-element 8 1789 2.0 0.5 1.2 3.6 1821 chr3L 11087057 intron JIL-1 - chr3L 11087968 intron JIL-1 - chr3L 11088878 intron JIL-1 - chr3L_8_11085001 chr3L_11085001 KN35_1-HE 1727 chr3L 11105294 11105329 chr3L 11107006 11107041 X-element 13 1712 3.0 5.5 4.2 2.5 1747 chr3L 11105294 intergenic not near genes chr3L 11106168 intergenic not near genes chr3L 11107041 exon CG32073 - chr3L_13_11105001 chr3L_11105001 KN35_1-HE 1728 chr3L 11145543 11145551 chr3L 11145632 11145640 6 89 0.0 4.0 2.0 2.0 97 chr3L 11145543 intron CG32082 + chr3L 11145592 intron CG32082 + chr3L 11145640 intron CG32082 + chr3L_6_11145001 chr3L_11145001 KN35_1-HE 1729 chr3L 11196121 11196137 chr3L 11196367 11196383 5 246 3.0 5.5 4.2 1.0 262 chr3L 11196121 intron GlcAT-P - chr3L 11196252 intron GlcAT-P - chr3L 11196383 intron GlcAT-P - chr3L_5_11195001 chr3L_11195001 KN35_1-HE 1730 chr3L 11217542 11217545 chr3L 11217626 11217629 5 84 5.0 0.0 2.5 1.4 87 chr3L 11217542 intron CG42671 + chr3L 11217586 intron CG42671 + chr3L 11217629 intron CG42671 + chr3L_5_11215001 chr3L_11215001 KN35_1-HE 1731 chr3L 11240535 11240551 chr3L 11240612 11240628 9 77 8.5 0.0 4.2 1.7 93 chr3L 11240535 intergenic not near genes chr3L 11240582 intergenic not near genes chr3L 11240628 intergenic not near genes chr3L_9_11240001 chr3L_11240001 KN35_1-HE 1732 chr3L 11241776 11241792 chr3L 11241859 11241875 6 83 3.5 5.0 4.2 1.2 99 chr3L 11241776 intergenic not near genes chr3L 11241826 intergenic not near genes chr3L 11241875 intergenic not near genes chr3L_6_11240001 chr3L_11240001 KN35_1-HE 1733 chr3L 11264466 11264497 chr3L 11271417 11271448 17.6 8 6951 3.0 2.5 2.8 2.1 6982 chr3L 11264466 intergenic not near genes chr3L 11267957 intergenic not near genes chr3L 11271448 intergenic not near genes chr3L_8_11265001 chr3L_11265001 KN35_1-HE 1734 chr3L 11277456 11277470 chr3L 11278452 11278466 Rt1a 4 996 6.5 3.0 4.8 0.7 1010 chr3L 11277456 intergenic not near genes chr3L 11277961 intergenic not near genes chr3L 11278466 intergenic not near genes chr3L_4_11275001 chr3L_11275001 KN35_1-HE 1735 chr3L 11279726 11279738 chr3L 11279808 11279820 9 82 7.0 0.0 3.5 2.0 94 chr3L 11279726 intergenic not near genes chr3L 11279773 intergenic not near genes chr3L 11279820 intergenic not near genes chr3L_9_11275001 chr3L_11275001 KN35_1-HE 1736 chr3L 11279739 11279750 chr3L 11279800 11279824 7 77 4.5 0.0 2.2 2.2 85 chr3L 11279739 intergenic not near genes chr3L 11279782 intergenic not near genes chr3L 11279824 intergenic not near genes chr3L_7_11275001 chr3L_11275001 KN35_1-HE 1737 chr3L 11282455 11282466 chr3L 11282532 11282543 7 77 0.0 4.5 2.2 2.2 88 chr3L 11282455 intergenic not near genes chr3L 11282499 intergenic not near genes chr3L 11282543 intergenic not near genes chr3L_7_11280001 chr3L_11280001 KN35_1-HE 1738 chr3L 11290623 11290657 chr3L 11290947 11290981 16 324 6.0 3.5 4.8 2.8 358 chr3L 11290623 intron CG6175 - chr3L 11290802 intron CG6175 - chr3L 11290981 intron CG6175 - chr3L_16_11290001 chr3L_11290001 KN35_1-HE 1739 chr3L 11297616 11297653 chr3L 11297693 11297730 22 77 5.0 4.5 4.8 3.8 114 chr3L 11297616 intergenic not near genes chr3L 11297673 intergenic not near genes chr3L 11297730 intergenic not near genes chr3L_22_11295001 chr3L_11295001 KN35_1-HE 1740 chr3L 11315079 11315090 chr3L 11315167 11315171 6 87 0.0 0.0 0.0 6.0 92 chr3L 11315079 intergenic CR44361 + chr3L 11315125 intergenic CR44361 + chr3L 11315171 intergenic CR44361 + chr3L_6_11315001 chr3L_11315001 KN35_1-HE 1741 chr3L 11329688 11329720 chr3L 11332894 11332926 jockey 9 3206 2.5 4.5 3.5 2.0 3238 chr3L 11329688 intergenic not near genes chr3L 11331307 intergenic not near genes chr3L 11332926 intergenic not near genes chr3L_9_11330001 chr3L_11330001 KN35_1-HE 1742 chr3L 11346072 11346078 chr3L 11346157 11346163 4 85 6.5 4.5 5.5 0.6 91 chr3L 11346072 intergenic not near genes chr3L 11346118 intergenic not near genes chr3L 11346163 intergenic not near genes chr3L_4_11345001 chr3L_11345001 KN35_1-HE 1743 chr3L 11428646 11428659 chr3L 11428732 11428745 8 86 5.5 0.0 2.8 2.1 99 chr3L 11428646 intergenic not near genes chr3L 11428696 intergenic not near genes chr3L 11428745 intergenic not near genes chr3L_8_11425001 chr3L_11425001 KN35_1-HE 1744 chr3L 11456909 11456916 chr3L 11457008 11457015 4 99 7.0 0.0 3.5 0.9 106 chr3L 11456909 intergenic CG12289 - chr3L 11456962 intergenic CG12289 - chr3L 11457015 intergenic CG12289 - chr3L_4_11455001 chr3L_11455001 KN35_1-HE 1745 chr3L 11474618 11474657 chr3L 11474708 11474747 14 90 3.5 0.0 1.8 5.0 129 chr3L 11474618 intergenic Vha16-2 + chr3L 11474682 intergenic Vha16-2 + chr3L 11474747 intergenic Vha16-2 + chr3L_14_11470001 chr3L_11470001 KN35_1-HE 1746 chr3L 11475624 11475639 chr3L 11475716 11475731 5 92 1.5 2.0 1.8 1.8 107 chr3L 11475624 intergenic Vha16-2 + chr3L 11475678 intergenic Vha16-2 + chr3L 11475731 intergenic Vha16-2 + chr3L_5_11475001 chr3L_11475001 KN35_1-HE 1747 chr3L 11482341 11482366 chr3L 11482419 11482444 8 78 2.0 3.0 2.5 2.3 103 chr3L 11482341 intergenic not near genes chr3L 11482392 intergenic not near genes chr3L 11482444 intergenic not near genes chr3L_8_11480001 chr3L_11480001 KN35_1-HE 1748 chr3L 11493156 11493186 chr3L 11493252 11493282 8 96 0.0 3.0 1.5 3.2 126 chr3L 11493156 intron chrb + chr3L 11493219 intron chrb + chr3L 11493282 intron chrb + chr3L_8_11490001 chr3L_11490001 KN35_1-HE 1749 chr3L 11541199 11541223 chr3L 11541279 11541303 12 80 1.5 3.0 2.2 3.8 104 chr3L 11541199 intron Mob2 - chr3L 11541251 intron Mob2 - chr3L 11541303 intron Mob2 - chr3L_12_11540001 chr3L_11540001 KN35_1-HE 1750 chr3L 11564791 11564808 chr3L 11572416 11572434 412 5 7626 5.0 7.5 6.2 0.7 7643 chr3L 11564791 exon CG33267 + chr3L 11568612 intron CG33267 + chr3L 11572434 exon CG33267 + chr3L_5_11565001 chr3L_11565001 KN35_1-HE 1751 chr3L 11579556 11579584 chr3L 11579663 11579691 8 107 2.0 1.5 1.8 2.9 135 chr3L 11579556 intergenic CG43390 - chr3L 11579624 intergenic CG43390 - chr3L 11579691 intergenic CG43390 - chr3L_8_11575001 chr3L_11575001 KN35_1-HE 1752 chr3L 11587919 11587954 chr3L 11587996 11588031 5 77 0.5 2.0 1.2 2.3 112 chr3L 11587919 intergenic rt - chr3L 11587975 intergenic rt - chr3L 11588031 intergenic rt - chr3L_5_11585001 chr3L_11585001 KN35_1-HE 1753 chr3L 11611638 11611644 chr3L 11611992 11611998 6 354 7.5 16.0 11.8 0.5 360 chr3L 11611638 exon Muc68Ca - chr3L 11611818 exon Muc68Ca - chr3L 11611998 exon Muc68Ca - chr3L_6_11610001 chr3L_11610001 KN35_1-HE 1754 chr3L 11678096 11678119 chr3L 11678184 11678206 5 87 5.5 0.0 2.8 1.3 110 chr3L 11678096 intron CG32085 - chr3L 11678151 intron CG32085 - chr3L 11678206 intron CG32085 - chr3L_5_11675001 chr3L_11675001 KN35_1-HE 1755 chr3L 11717767 11717781 chr3L 11717866 11717880 5 99 6.0 1.0 3.5 1.1 113 chr3L 11717767 intergenic not near genes chr3L 11717824 intergenic not near genes chr3L 11717880 intergenic not near genes chr3L_5_11715001 chr3L_11715001 KN35_1-HE 1756 chr3L 11723079 11723115 chr3L 11727875 11727911 Doc 15 4796 3.0 2.5 2.8 3.9 4832 chr3L 11723079 3` UTR Bmcp + chr3L 11725495 intron Bmcp + chr3L 11727911 3` UTR Bmcp + chr3L_15_11725001 chr3L_11725001 KN35_1-HE 1757 chr3L 11757917 11757932 chr3L 11758015 11758030 5 98 8.0 0.0 4.0 1.0 113 chr3L 11757917 intron CG6024 - chr3L 11757974 intron CG6024 - chr3L 11758030 intron CG6024 - chr3L_5_11755001 chr3L_11755001 KN35_1-HE 1758 chr3L 11789761 11789792 chr3L 11789851 11789882 13 90 3.5 5.0 4.2 2.5 121 chr3L 11789761 intron Pi3K68D - chr3L 11789822 intron Pi3K68D - chr3L 11789882 intron Pi3K68D - chr3L_13_11785001 chr3L_11785001 KN35_1-HE 1759 chr3L 11837174 11837187 chr3L 11837256 11837269 7 82 0.0 0.0 0.0 7.0 95 chr3L 11837174 intergenic CG43064 - chr3L 11837222 intergenic not near genes chr3L 11837269 intergenic not near genes chr3L_7_11835001 chr3L_11835001 KN35_1-HE 1760 chr3L 11841706 11841709 chr3L 11841800 11841803 4 94 2.5 3.0 2.8 1.1 97 chr3L 11841706 intergenic not near genes chr3L 11841754 intergenic not near genes chr3L 11841803 intergenic not near genes chr3L_4_11840001 chr3L_11840001 KN35_1-HE 1761 chr3L 11846401 11846412 chr3L 11846510 11846521 4 109 0.0 4.5 2.2 1.2 120 chr3L 11846401 intergenic not near genes chr3L 11846461 intergenic not near genes chr3L 11846521 intergenic not near genes chr3L_4_11845001 chr3L_11845001 KN35_1-HE 1762 chr3L 11857995 11858007 chr3L 11858126 11858138 6 131 6.5 2.5 4.5 1.1 143 chr3L 11857995 intron CG44837 - chr3L 11858066 intron CG44837 - chr3L 11858138 intron CG44837 - chr3L_6_11855001 chr3L_11855001 KN35_1-HE 1763 chr3L 11864552 11864584 chr3L 11865848 11865880 pogo 17 1296 2.5 7.0 4.8 2.9 1328 chr3L 11864552 intron CG44837 - chr3L 11865216 intron CG44837 - chr3L 11865880 intron CG44837 - chr3L_17_11865001 chr3L_11865001 KN35_1-HE 1764 chr3L 11887257 11887289 chr3L 11887355 11887392 7 99 0.0 5.0 2.5 2.0 135 chr3L 11887257 intron CG44837 - chr3L 11887324 intron,3` UTR CG44837 -,CG5897 - chr3L 11887392 intron,3` UTR CG44837 -,CG5897 - chr3L_7_11885001 chr3L_11885001 KN35_1-HE 1765 chr3L 11920787 11920814 chr3L 11920967 11920994 12 180 5.0 4.0 4.5 2.2 207 chr3L 11920787 intron CG44837 - chr3L 11920890 intron CG44837 - chr3L 11920994 intron CG44837 - chr3L_12_11920001 chr3L_11920001 KN35_1-HE 1766 chr3L 11943495 11943518 chr3L 11943597 11943620 7 102 2.5 3.5 3.0 1.8 125 chr3L 11943495 intergenic Rpt4R +,CG5883 - chr3L 11943558 intergenic Rpt4R +,CG5883 - chr3L 11943620 intergenic CG5883 -,Rpt4R + chr3L_7_11940001 chr3L_11940001 KN35_1-HE 1767 chr3L 11984083 11984110 chr3L 11984162 11984189 5 76 4.0 4.0 4.0 1.0 106 chr3L 11984083 intergenic CG43896 + chr3L 11984136 intergenic CG43896 + chr3L 11984189 intergenic CG43896 + chr3L_5_11980001 chr3L_11980001 KN35_1-HE 1768 chr3L 12032933 12032959 chr3L 12033011 12033037 13 78 7.0 0.0 3.5 2.9 104 chr3L 12032933 intron,3` UTR rols -,CG43993 + chr3L 12032985 intron,3` UTR rols -,CG43993 + chr3L 12033037 intron rols - chr3L_13_12030001 chr3L_12030001 KN35_1-HE 1769 chr3L 12075425 12075439 chr3L 12075515 12075529 4 90 6.0 0.0 3.0 1.0 104 chr3L 12075425 intron Sema-5c - chr3L 12075477 intron Sema-5c - chr3L 12075529 intron Sema-5c - chr3L_4_12075001 chr3L_12075001 KN35_1-HE 1770 chr3L 12092403 12092421 chr3L 12092481 12092499 6 78 0.5 3.0 1.8 2.1 96 chr3L 12092403 intergenic not near genes chr3L 12092451 intergenic not near genes chr3L 12092499 intergenic not near genes chr3L_6_12090001 chr3L_12090001 KN35_1-HE 1771 chr3L 12170791 12170825 chr3L 12170874 12170908 12 83 1.0 4.5 2.8 3.2 117 chr3L 12170791 intron Rh7 - chr3L 12170850 intron Rh7 - chr3L 12170908 intron Rh7 - chr3L_12_12170001 chr3L_12170001 KN35_1-HE 1772 chr3L 12222116 12222121 chr3L 12222200 12222205 5 84 0.0 13.5 6.8 0.6 89 chr3L 12222116 intron app - chr3L 12222160 intron app - chr3L 12222205 intron app - chr3L_5_12220001 chr3L_12220001 KN35_1-HE 1773 chr3L 12247155 12247180 chr3L 12247453 12247478 10 298 6.5 0.0 3.2 2.4 323 chr3L 12247155 intron app - chr3L 12247316 intron app - chr3L 12247478 intron app - chr3L_10_12245001 chr3L_12245001 KN35_1-HE 1774 chr3L 12300828 12300860 chr3L 12300916 12300948 18 88 1.0 1.0 1.0 9.0 120 chr3L 12300828 intergenic CR44550 + chr3L 12300888 intergenic CR44550 + chr3L 12300948 intergenic CR44550 + chr3L_18_12300001 chr3L_12300001 KN35_1-HE 1775 chr3L 12327437 12327469 chr3L 12327519 12327554 16 83 3.0 1.0 2.0 5.3 117 chr3L 12327437 intergenic not near genes chr3L 12327496 intergenic not near genes chr3L 12327554 intergenic not near genes chr3L_16_12325001 chr3L_12325001 KN35_1-HE 1776 chr3L 12335393 12335417 chr3L 12335473 12335497 9 75 4.5 4.5 4.5 1.6 104 chr3L 12335393 exon CG32105 + chr3L 12335445 3` UTR CG32105 + chr3L 12335497 3` UTR CG32105 + chr3L_9_12335001 chr3L_12335001 KN35_1-HE 1777 chr3L 12344967 12345001 chr3L 12345052 12345086 11 85 5.0 2.0 3.5 2.4 119 chr3L 12344967 intron CrzR - chr3L 12345026 intron CrzR - chr3L 12345086 intron CrzR - chr3L_11_12345001 chr3L_12345001 KN35_1-HE 1778 chr3L 12369527 12369530 chr3L 12369702 12369705 4 175 10.0 0.0 5.0 0.7 178 chr3L 12369527 intron Ncc69 - chr3L 12369616 intron Ncc69 - chr3L 12369705 intron Ncc69 - chr3L_4_12365001 chr3L_12365001 KN35_1-HE 1779 chr3L 12378507 12378541 chr3L 12378584 12378618 9 77 5.0 4.5 4.8 1.6 111 chr3L 12378507 intron Ncc69 - chr3L 12378562 intron Ncc69 - chr3L 12378618 intron Ncc69 - chr3L_9_12375001 chr3L_12375001 KN35_1-HE 1780 chr3L 12381541 12381553 chr3L 12381620 12381632 11 79 1.0 0.5 0.8 6.1 91 chr3L 12381541 intron Ncc69 - chr3L 12381586 intron Ncc69 - chr3L 12381632 intron Ncc69 - chr3L_11_12380001 chr3L_12380001 KN35_1-HE 1781 chr3L 12388075 12388102 chr3L 12388160 12388187 10 85 6.0 6.0 6.0 1.4 112 chr3L 12388075 intron Ncc69 - chr3L 12388131 intron Ncc69 - chr3L 12388187 intron Ncc69 - chr3L_10_12385001 chr3L_12385001 KN35_1-HE 1782 chr3L 12446269 12446300 chr3L 12446348 12446379 15 77 2.0 3.0 2.5 4.3 110 chr3L 12446269 intergenic not near genes chr3L 12446324 intergenic not near genes chr3L 12446379 intergenic not near genes chr3L_15_12445001 chr3L_12445001 KN35_1-HE 1783 chr3L 12460015 12460314 chr3L 12460106 12460392 15 89 0.0 2.0 1.0 7.5 377 chr3L 12460015 intergenic not near genes chr3L 12460204 intergenic not near genes chr3L 12460392 intergenic not near genes chr3L_15_12460001 chr3L_12460001 KN35_1-HE 1784 chr3L 12460315 12460343 chr3L 12460393 12460421 14 78 0.0 4.0 2.0 4.7 106 chr3L 12460315 intergenic not near genes chr3L 12460368 intergenic not near genes chr3L 12460421 intergenic not near genes chr3L_14_12460001 chr3L_12460001 KN35_1-HE 1785 chr3L 12467273 12467284 chr3L 12467359 12467370 7 86 0.0 10.5 5.2 1.1 97 chr3L 12467273 intron eyg - chr3L 12467322 intron eyg - chr3L 12467370 intron eyg - chr3L_7_12465001 chr3L_12465001 KN35_1-HE 1786 chr3L 12541516 12541813 chr3L 12541612 12541903 6 94 10.0 0.0 5.0 1.0 387 chr3L 12541516 intron sowah - chr3L 12541710 intron,5` UTR sowah -,CR43612 + chr3L 12541903 intron,5` UTR sowah -,CR43612 + chr3L_6_12540001 chr3L_12540001 KN35_1-HE 1787 chr3L 12575613 12575644 chr3L 12575690 12575721 12 77 8.0 3.5 5.8 1.8 108 chr3L 12575613 intergenic not near genes chr3L 12575667 intergenic not near genes chr3L 12575721 intergenic not near genes chr3L_12_12575001 chr3L_12575001 KN35_1-HE 1788 chr3L 12587350 12587384 chr3L 12587434 12587468 8 84 1.5 0.0 0.8 4.4 118 chr3L 12587350 intron ara + chr3L 12587409 intron ara + chr3L 12587468 intron ara + chr3L_8_12585001 chr3L_12585001 KN35_1-HE 1789 chr3L 12625360 12625372 chr3L 12625439 12625451 5 79 5.0 2.5 3.8 1.0 91 chr3L 12625360 intergenic not near genes chr3L 12625406 intergenic not near genes chr3L 12625451 intergenic not near genes chr3L_5_12625001 chr3L_12625001 KN35_1-HE 1790 chr3L 12626152 12626165 chr3L 12626262 12626275 12 110 1.0 3.5 2.2 3.8 123 chr3L 12626152 intergenic not near genes chr3L 12626214 intergenic not near genes chr3L 12626275 intergenic not near genes chr3L_12_12625001 chr3L_12625001 KN35_1-HE 1791 chr3L 12676215 12676230 chr3L 12676381 12676396 7 166 1.0 3.0 2.0 2.3 181 chr3L 12676215 intergenic not near genes chr3L 12676306 intergenic not near genes chr3L 12676396 intergenic not near genes chr3L_7_12675001 chr3L_12675001 KN35_1-HE 1792 chr3L 12682976 12683008 chr3L 12683053 12683085 22 77 6.5 9.0 7.8 2.5 109 chr3L 12682976 intergenic not near genes chr3L 12683030 intergenic not near genes chr3L 12683085 intergenic not near genes chr3L_22_12680001 chr3L_12680001 KN35_1-HE 1793 chr3L 12743275 12743288 chr3L 12743354 12743367 6 79 0.5 0.0 0.2 5.0 92 chr3L 12743275 intron CG32112 + chr3L 12743321 intron CG32112 + chr3L 12743367 intron CG32112 + chr3L_6_12740001 chr3L_12740001 KN35_1-HE 1794 chr3L 12801983 12802011 chr3L 12802060 12802088 8 77 0.5 3.0 1.8 2.9 105 chr3L 12801983 intron Atg1 - chr3L 12802036 intron Atg1 - chr3L 12802088 intron Atg1 - chr3L_8_12800001 chr3L_12800001 KN35_1-HE 1795 chr3L 12854330 12854365 chr3L 12854408 12854443 17 78 1.5 4.0 2.8 4.5 113 chr3L 12854330 intron Ent3 + chr3L 12854386 intron Ent3 + chr3L 12854443 intron Ent3 + chr3L_17_12850001 chr3L_12850001 KN35_1-HE 1796 chr3L 12857996 12858002 chr3L 12858091 12858097 5 95 4.0 1.5 2.8 1.3 101 chr3L 12857996 3` UTR CG32107 - chr3L 12858046 3` UTR CG32107 - chr3L 12858097 3` UTR CG32107 - chr3L_5_12855001 chr3L_12855001 KN35_1-HE 1797 chr3L 12874923 12874960 chr3L 12877216 12877253 jockey 20 2293 3.0 5.0 4.0 4.0 2330 chr3L 12874923 intergenic not near genes chr3L 12876088 intergenic not near genes chr3L 12877253 intergenic not near genes chr3L_20_12875001 chr3L_12875001 KN35_1-HE 1798 chr3L 12894809 12894818 chr3L 12894888 12894897 9 79 5.5 5.0 5.2 1.5 88 chr3L 12894809 intergenic CG14118 + chr3L 12894853 intergenic CG14118 + chr3L 12894897 intergenic CG14118 + chr3L_9_12890001 chr3L_12890001 KN35_1-HE 1799 chr3L 12896236 12896268 chr3L 12896315 12896326 4 74 3.5 1.0 2.2 1.2 90 chr3L 12896236 intergenic not near genes chr3L 12896281 intergenic not near genes chr3L 12896326 intergenic not near genes chr3L_4_12895001 chr3L_12895001 KN35_1-HE 1800 chr3L 12897495 12897524 chr3L 12897635 12897664 15 140 4.0 5.0 4.5 2.7 169 chr3L 12897495 intergenic not near genes chr3L 12897580 intergenic not near genes chr3L 12897664 intergenic not near genes chr3L_15_12895001 chr3L_12895001 KN35_1-HE 1801 chr3L 12919273 12919303 chr3L 12924747 12924777 Rt1c 20 5474 4.5 9.0 6.8 2.6 5504 chr3L 12919273 intergenic not near genes chr3L 12922025 intergenic not near genes chr3L 12924777 intergenic not near genes chr3L_20_12920001 chr3L_12920001 KN35_1-HE 1802 chr3L 12927309 12927343 chr3L 12927402 12927436 19 93 5.5 6.5 6.0 2.7 127 chr3L 12927309 intergenic not near genes chr3L 12927372 intergenic not near genes chr3L 12927436 intergenic not near genes chr3L_19_12925001 chr3L_12925001 KN35_1-HE 1803 chr3L 12957784 12957820 chr3L 12962267 12962303 copia 14 4483 5.5 10.5 8.0 1.6 4519 chr3L 12957784 intergenic not near genes chr3L 12960044 intergenic not near genes chr3L 12962303 intergenic not near genes chr3L_14_12960001 chr3L_12960001 KN35_1-HE 1804 chr3L 12977455 12977490 chr3L 12977533 12977568 22 78 8.5 7.0 7.8 2.5 113 chr3L 12977455 intergenic not near genes chr3L 12977512 intergenic not near genes chr3L 12977568 intergenic not near genes chr3L_22_12975001 chr3L_12975001 KN35_1-HE 1805 chr3L 12978319 12978349 chr3L 12978417 12978447 13 98 3.5 5.5 4.5 2.4 128 chr3L 12978319 intergenic not near genes chr3L 12978383 intergenic not near genes chr3L 12978447 intergenic not near genes chr3L_13_12975001 chr3L_12975001 KN35_1-HE 1806 chr3L 13092065 13092100 chr3L 13092143 13092178 18 78 7.0 2.0 4.5 3.3 113 chr3L 13092065 intergenic not near genes chr3L 13092122 intergenic not near genes chr3L 13092178 intergenic not near genes chr3L_18_13090001 chr3L_13090001 KN35_1-HE 1807 chr3L 13094568 13094711 chr3L 13094659 13094792 42 85 2.0 2.0 2.0 14.0 224 chr3L 13094568 intergenic not near genes chr3L 13094680 intergenic not near genes chr3L 13094792 intergenic not near genes chr3L_42_13090001 chr3L_13090001 KN35_1-HE 1808 chr3L 13112563 13112573 chr3L 13112663 13112673 6 100 4.0 0.0 2.0 2.0 110 chr3L 13112563 intergenic not near genes chr3L 13112618 intergenic not near genes chr3L 13112673 intergenic not near genes chr3L_6_13110001 chr3L_13110001 KN35_1-HE 1809 chr3L 13152464 13152497 chr3L 13152543 13152576 21 79 5.0 5.5 5.2 3.4 112 chr3L 13152464 intergenic not near genes chr3L 13152520 intergenic not near genes chr3L 13152576 intergenic not near genes chr3L_21_13150001 chr3L_13150001 KN35_1-HE 1810 chr3L 13161770 13161796 chr3L 13161847 13161873 16 77 8.0 9.0 8.5 1.7 103 chr3L 13161770 intergenic not near genes chr3L 13161822 intergenic not near genes chr3L 13161873 intergenic not near genes chr3L_16_13160001 chr3L_13160001 KN35_1-HE 1811 chr3L 13194064 13194101 chr3L 13194144 13194181 21 80 3.0 5.5 4.2 4.0 117 chr3L 13194064 intergenic not near genes chr3L 13194122 intergenic not near genes chr3L 13194181 intergenic not near genes chr3L_21_13190001 chr3L_13190001 KN35_1-HE 1812 chr3L 13236561 13236568 chr3L 13236639 13236646 7 78 0.0 9.5 4.8 1.2 85 chr3L 13236561 intron caps + chr3L 13236604 intron caps + chr3L 13236646 intron caps + chr3L_7_13235001 chr3L_13235001 KN35_1-HE 1813 chr3L 13264792 13264801 chr3L 13264869 13264878 7 77 10.0 4.0 7.0 0.9 86 chr3L 13264792 intron caps + chr3L 13264835 intron caps + chr3L 13264878 intron caps + chr3L_7_13260001 chr3L_13260001 KN35_1-HE 1814 chr3L 13267284 13267317 chr3L 13267398 13267431 12 114 2.5 3.5 3.0 3.0 147 chr3L 13267284 intron caps + chr3L 13267358 intron caps + chr3L 13267431 intron caps + chr3L_12_13265001 chr3L_13265001 KN35_1-HE 1815 chr3L 13296519 13296549 chr3L 13296611 13296641 18 92 5.0 10.0 7.5 2.1 122 chr3L 13296519 intergenic Sfp70A4 -,CR45253 + chr3L 13296580 3` UTR Sfp70A4 - chr3L 13296641 3` UTR Sfp70A4 - chr3L_18_13295001 chr3L_13295001 KN35_1-HE 1816 chr3L 13301251 13301276 chr3L 13301334 13301359 14 83 0.0 0.0 0.0 14.0 108 chr3L 13301251 intergenic SP + chr3L 13301305 intergenic SP + chr3L 13301359 intergenic SP + chr3L_14_13300001 chr3L_13300001 KN35_1-HE 1817 chr3L 13315939 13315953 chr3L 13316204 13316218 4 265 0.0 7.5 3.8 0.8 279 chr3L 13315939 intergenic not near genes chr3L 13316078 intergenic not near genes chr3L 13316218 intergenic not near genes chr3L_4_13315001 chr3L_13315001 KN35_1-HE 1818 chr3L 13365049 13365070 chr3L 13365128 13365149 11 79 7.0 0.0 3.5 2.4 100 chr3L 13365049 intergenic not near genes chr3L 13365099 intergenic not near genes chr3L 13365149 intergenic not near genes chr3L_11_13365001 chr3L_13365001 KN35_1-HE 1819 chr3L 13374244 13374278 chr3L 13374334 13374368 16 90 5.0 3.5 4.2 3.1 124 chr3L 13374244 intergenic not near genes chr3L 13374306 intergenic not near genes chr3L 13374368 intergenic not near genes chr3L_16_13370001 chr3L_13370001 KN35_1-HE 1820 chr3L 13379674 13379678 chr3L 13379870 13379874 4 196 1.5 7.0 4.2 0.8 200 chr3L 13379674 intron CG14111 + chr3L 13379774 intron CG14111 + chr3L 13379874 intron CG14111 + chr3L_4_13375001 chr3L_13375001 KN35_1-HE 1821 chr3L 13409344 13409373 chr3L 13409432 13409461 18 88 2.0 5.0 3.5 4.0 117 chr3L 13409344 intergenic not near genes chr3L 13409402 intergenic not near genes chr3L 13409461 intergenic not near genes chr3L_18_13405001 chr3L_13405001 KN35_1-HE 1822 chr3L 13422603 13422618 chr3L 13423046 13423061 15 443 7.0 7.0 7.0 1.9 458 chr3L 13422603 intergenic CG32121 - chr3L 13422832 intergenic CG33263 -,CG32121 - chr3L 13423061 intergenic CG33263 - chr3L_15_13420001 chr3L_13420001 KN35_1-HE 1823 chr3L 13493873 13493910 chr3L 13493961 13493998 22 88 5.5 4.0 4.8 3.8 125 chr3L 13493873 intron Tgi + chr3L 13493936 intron Tgi + chr3L 13493998 intron Tgi + chr3L_22_13490001 chr3L_13490001 KN35_1-HE 1824 chr3L 13496877 13496901 chr3L 13496984 13497008 12 107 4.0 7.5 5.8 1.8 131 chr3L 13496877 intron Tgi + chr3L 13496942 intron Tgi + chr3L 13497008 intron Tgi + chr3L_12_13495001 chr3L_13495001 KN35_1-HE 1825 chr3L 13525153 13525186 chr3L 13532950 13532982 roo 9 7797 7.5 5.5 6.5 1.2 7829 chr3L 13525153 intergenic not near genes chr3L 13529068 intergenic not near genes chr3L 13532982 intergenic not near genes chr3L_9_13525001 chr3L_13525001 KN35_1-HE 1826 chr3L 13596034 13596072 chr3L 13596150 13596188 26 116 6.5 4.5 5.5 4.0 154 chr3L 13596034 intron bru-3 - chr3L 13596111 intron bru-3 - chr3L 13596188 intron bru-3 - chr3L_26_13595001 chr3L_13595001 KN35_1-HE 1827 chr3L 13629527 13629549 chr3L 13629639 13629661 16 112 8.5 13.5 11.0 1.3 134 chr3L 13629527 intron bru-3 - chr3L 13629594 intron bru-3 - chr3L 13629661 intron bru-3 - chr3L_16_13625001 chr3L_13625001 KN35_1-HE 1828 chr3L 13677527 13677626 chr3L 13677605 13677784 17 111 0.0 0.0 0.0 17.0 257 chr3L 13677527 intron bru-3 - chr3L 13677656 intron bru-3 - chr3L 13677784 intron bru-3 - chr3L_17_13675001 chr3L_13675001 KN35_1-HE 1829 chr3L 13714403 13714440 chr3L 13714493 13714529 16 90 6.5 1.0 3.8 3.3 126 chr3L 13714403 intron bru-3 - chr3L 13714466 intron bru-3 - chr3L 13714529 intron bru-3 - chr3L_16_13710001 chr3L_13710001 KN35_1-HE 1830 chr3L 13740036 13740065 chr3L 13740126 13740155 20 90 4.5 6.5 5.5 3.1 119 chr3L 13740036 intron bru-3 - chr3L 13740096 intron bru-3 - chr3L 13740155 intron bru-3 - chr3L_20_13740001 chr3L_13740001 KN35_1-HE 1831 chr3L 13741556 13741591 chr3L 13741635 13741670 14 79 4.5 5.0 4.8 2.4 114 chr3L 13741556 intron bru-3 - chr3L 13741613 intron bru-3 - chr3L 13741670 intron bru-3 - chr3L_14_13740001 chr3L_13740001 KN35_1-HE 1832 chr3L 13745290 13745306 chr3L 13745380 13745396 9 89 3.0 0.0 1.5 3.6 106 chr3L 13745290 intron bru-3 - chr3L 13745343 intron bru-3 - chr3L 13745396 intron bru-3 - chr3L_9_13745001 chr3L_13745001 KN35_1-HE 1833 chr3L 13767910 13767943 chr3L 13767992 13768025 22 82 2.5 3.5 3.0 5.5 115 chr3L 13767910 intron bru-3 - chr3L 13767968 intron bru-3 - chr3L 13768025 intron bru-3 - chr3L_22_13765001 chr3L_13765001 KN35_1-HE 1834 chr3L 13785499 13785504 chr3L 13785580 13785585 4 81 8.5 2.0 5.2 0.6 86 chr3L 13785499 intron bru-3 - chr3L 13785542 intron bru-3 - chr3L 13785585 intron bru-3 - chr3L_4_13785001 chr3L_13785001 KN35_1-HE 1835 chr3L 13804545 13804574 chr3L 13822832 13822861 roo 22 18287 7.0 5.5 6.2 3.1 18316 chr3L 13804545 intergenic not near genes chr3L 13813703 intergenic not near genes chr3L 13822861 intergenic not near genes chr3L_22_13810001 chr3L_13810001 KN35_1-HE 1836 chr3L 13837264 13837295 chr3L 13837342 13837373 11 78 0.0 2.0 1.0 5.5 109 chr3L 13837264 intergenic CG43184 + chr3L 13837318 intergenic CG43184 + chr3L 13837373 intergenic CG43184 + chr3L_11_13835001 chr3L_13835001 KN35_1-HE 1837 chr3L 13884380 13884386 chr3L 13884472 13884478 5 92 8.0 7.0 7.5 0.6 98 chr3L 13884380 intron dysc - chr3L 13884429 intron dysc - chr3L 13884478 intron dysc - chr3L_5_13880001 chr3L_13880001 KN35_1-HE 1838 chr3L 13910258 13910290 chr3L 13910344 13910376 14 86 8.0 2.0 5.0 2.3 118 chr3L 13910258 intron Rgl - chr3L 13910317 intron Rgl - chr3L 13910376 intron Rgl - chr3L_14_13910001 chr3L_13910001 KN35_1-HE 1839 chr3L 13912312 13912340 chr3L 13912581 13912609 7 269 4.5 7.5 6.0 1.0 297 chr3L 13912312 intron Rgl - chr3L 13912460 intron Rgl - chr3L 13912609 intron Rgl - chr3L_7_13910001 chr3L_13910001 KN35_1-HE 1840 chr3L 13920421 13920432 chr3L 13920502 13920513 4 81 3.0 7.5 5.2 0.6 92 chr3L 13920421 intron Rgl - chr3L 13920467 intron Rgl - chr3L 13920513 intron Rgl - chr3L_4_13920001 chr3L_13920001 KN35_1-HE 1841 chr3L 13943151 13943164 chr3L 13943260 13943273 7 109 9.0 4.0 6.5 0.9 122 chr3L 13943151 intron CG32137 + chr3L 13943212 intron CG32137 + chr3L 13943273 intron CG32137 + chr3L_7_13940001 chr3L_13940001 KN35_1-HE 1842 chr3L 13948796 13948825 chr3L 13948879 13948908 6 82 8.0 1.5 4.8 1.0 112 chr3L 13948796 intron CG32137 + chr3L 13948852 intron CG32137 + chr3L 13948908 intron CG32137 + chr3L_6_13945001 chr3L_13945001 KN35_1-HE 1843 chr3L 13958437 13958472 chr3L 13958523 13958556 12 85 1.5 5.0 3.2 2.9 119 chr3L 13958437 intron CG32137 + chr3L 13958496 intron CG32137 + chr3L 13958556 intron CG32137 + chr3L_12_13955001 chr3L_13955001 KN35_1-HE 1844 chr3L 13988470 13988501 chr3L 13988592 13988623 12 122 1.0 4.0 2.5 3.4 153 chr3L 13988470 intron,3` UTR CG17364 -,CG9040 + chr3L 13988546 intron,3` UTR CG17364 -,CG9040 + chr3L 13988623 intron,3` UTR CG17364 -,CG9040 + chr3L_12_13985001 chr3L_13985001 KN35_1-HE 1845 chr3L 14002403 14002425 chr3L 14002498 14002520 10 95 7.5 4.5 6.0 1.4 117 chr3L 14002403 intron upSET + chr3L 14002462 intron upSET + chr3L 14002520 intron upSET + chr3L_10_14000001 chr3L_14000001 KN35_1-HE 1846 chr3L 14141409 14141413 chr3L 14141497 14141501 4 88 4.0 0.0 2.0 1.3 92 chr3L 14141409 intergenic not near genes chr3L 14141455 intergenic not near genes chr3L 14141501 intergenic not near genes chr3L_4_14140001 chr3L_14140001 KN35_1-HE 1847 chr3L 14185156 14185171 chr3L 14185232 14185248 5 77 4.5 3.5 4.0 1.0 92 chr3L 14185156 intergenic not near genes chr3L 14185202 intergenic not near genes chr3L 14185248 intergenic not near genes chr3L_5_14185001 chr3L_14185001 KN35_1-HE 1848 chr3L 14194723 14194742 chr3L 14194800 14194819 8 76 4.0 4.5 4.2 1.5 96 chr3L 14194723 intron nuf + chr3L 14194771 intron nuf + chr3L 14194819 intron nuf + chr3L_8_14190001 chr3L_14190001 KN35_1-HE 1849 chr3L 14196417 14196446 chr3L 14196503 14196532 12 86 3.0 9.5 6.2 1.7 115 chr3L 14196417 intron nuf + chr3L 14196474 intron nuf + chr3L 14196532 intron nuf + chr3L_12_14195001 chr3L_14195001 KN35_1-HE 1850 chr3L 14234841 14234856 chr3L 14234939 14234954 9 98 13.0 6.5 9.8 0.8 113 chr3L 14234841 intergenic CG34244 -,CG7924 + chr3L 14234898 intergenic CG34244 -,CG7924 + chr3L 14234954 intergenic CG34244 -,CG7924 + chr3L_9_14230001 chr3L_14230001 KN35_1-HE 1851 chr3L 14236771 14236775 chr3L 14236859 14236863 4 88 7.0 0.0 3.5 0.9 92 chr3L 14236771 exon CG7906 + chr3L 14236817 intron CG7906 + chr3L 14236863 intron CG7906 + chr3L_4_14235001 chr3L_14235001 KN35_1-HE 1852 chr3L 14245565 14245594 chr3L 14245660 14245689 1360 19 95 12.0 7.0 9.5 1.8 124 chr3L 14245565 3` UTR CR44561 - chr3L 14245627 3` UTR CR44561 - chr3L 14245689 3` UTR CR44561 - chr3L_19_14245001 chr3L_14245001 KN35_1-HE 1853 chr3L 14267368 14267398 chr3L 14271809 14271839 F-element 13 4441 4.0 5.5 4.8 2.2 4471 chr3L 14267368 intergenic not near genes chr3L 14269604 intergenic not near genes chr3L 14271839 intergenic not near genes chr3L_13_14265001 chr3L_14265001 KN35_1-HE 1854 chr3L 14282588 14282606 chr3L 14282669 14282687 12 81 8.5 11.5 10.0 1.1 99 chr3L 14282588 intron fz + chr3L 14282638 intron fz + chr3L 14282687 intron fz + chr3L_12_14280001 chr3L_14280001 KN35_1-HE 1855 chr3L 14295979 14296013 chr3L 14296466 14296500 roo 16 487 11.0 6.0 8.5 1.7 521 chr3L 14295979 intron fz + chr3L 14296240 intron fz + chr3L 14296500 intron fz + chr3L_16_14295001 chr3L_14295001 KN35_1-HE 1856 chr3L 14312020 14312058 chr3L 14316834 14316873 X-element 26 4814 5.0 3.5 4.2 5.0 4853 chr3L 14312020 exon fz + chr3L 14314446 intron fz + chr3L 14316873 intron fz + chr3L_26_14310001 chr3L_14310001 KN35_1-HE 1857 chr3L 14338297 14338331 chr3L 14338394 14338428 18 97 8.0 6.0 7.0 2.2 131 chr3L 14338297 intron fz + chr3L 14338362 intron fz + chr3L 14338428 intron fz + chr3L_18_14335001 chr3L_14335001 KN35_1-HE 1858 chr3L 14341411 14341415 chr3L 14341547 14341551 4 136 0.0 0.0 0.0 4.0 140 chr3L 14341411 intron fz + chr3L 14341481 intron fz + chr3L 14341551 intron fz + chr3L_4_14340001 chr3L_14340001 KN35_1-HE 1859 chr3L 14399175 14399191 chr3L 14399265 14399281 9 90 7.5 0.0 3.8 1.9 106 chr3L 14399175 intergenic not near genes chr3L 14399228 intergenic not near genes chr3L 14399281 intergenic not near genes chr3L_9_14395001 chr3L_14395001 KN35_1-HE 1860 chr3L 14455368 14455374 chr3L 14455450 14455456 5 82 8.0 0.0 4.0 1.0 88 chr3L 14455368 intron bbg - chr3L 14455412 intron bbg - chr3L 14455456 intron bbg - chr3L_5_14455001 chr3L_14455001 KN35_1-HE 1861 chr3L 14458126 14458158 chr3L 14458207 14458239 12 81 3.5 4.0 3.8 2.5 113 chr3L 14458126 intron bbg - chr3L 14458182 intron bbg - chr3L 14458239 intron bbg - chr3L_12_14455001 chr3L_14455001 KN35_1-HE 1862 chr3L 14462883 14462906 chr3L 14462972 14462995 16 89 0.0 5.5 2.8 4.2 112 chr3L 14462883 intron bbg - chr3L 14462939 intron bbg - chr3L 14462995 intron bbg - chr3L_16_14460001 chr3L_14460001 KN35_1-HE 1863 chr3L 14467709 14467747 chr3L 14467804 14467842 29 95 8.0 11.0 9.5 2.8 133 chr3L 14467709 intron bbg - chr3L 14467776 intron bbg - chr3L 14467842 intron bbg - chr3L_29_14465001 chr3L_14465001 KN35_1-HE 1864 chr3L 14468448 14468477 chr3L 14473655 14473684 copia 18 5207 8.5 7.5 8.0 2.0 5236 chr3L 14468448 intron bbg - chr3L 14471066 intron bbg - chr3L 14473684 intron bbg - chr3L_18_14470001 chr3L_14470001 KN35_1-HE 1865 chr3L 14486014 14486049 chr3L 14486096 14486131 24 82 8.0 5.0 6.5 3.2 117 chr3L 14486014 intron bbg - chr3L 14486072 intron bbg - chr3L 14486131 intron bbg - chr3L_24_14485001 chr3L_14485001 KN35_1-HE 1866 chr3L 14487616 14487624 chr3L 14487693 14487701 9 77 14.0 0.0 7.0 1.1 85 chr3L 14487616 intron bbg - chr3L 14487658 intron bbg - chr3L 14487701 intron bbg - chr3L_9_14485001 chr3L_14485001 KN35_1-HE 1867 chr3L 14522107 14522130 chr3L 14522207 14522230 9 100 3.0 6.5 4.8 1.6 123 chr3L 14522107 intron bbg - chr3L 14522168 intron bbg - chr3L 14522230 intron bbg - chr3L_9_14520001 chr3L_14520001 KN35_1-HE 1868 chr3L 14553319 14553353 chr3L 14553812 14553846 22 493 6.0 4.5 5.2 3.5 527 chr3L 14553319 intergenic not near genes chr3L 14553582 intergenic not near genes chr3L 14553846 intergenic not near genes chr3L_22_14550001 chr3L_14550001 KN35_1-HE 1869 chr3L 14596126 14596143 chr3L 14596207 14596224 9 81 0.0 8.5 4.2 1.7 98 chr3L 14596126 intron HGTX - chr3L 14596175 intron HGTX - chr3L 14596224 intron HGTX - chr3L_9_14595001 chr3L_14595001 KN35_1-HE 1870 chr3L 14603075 14603083 chr3L 14603153 14603161 10 78 0.0 0.0 0.0 10.0 86 chr3L 14603075 intergenic not near genes chr3L 14603118 intergenic not near genes chr3L 14603161 intergenic not near genes chr3L_10_14600001 chr3L_14600001 KN35_1-HE 1871 chr3L 14642470 14642502 chr3L 14642550 14642582 21 80 6.0 6.5 6.2 2.9 112 chr3L 14642470 intron dlp + chr3L 14642526 intron dlp + chr3L 14642582 intron dlp + chr3L_21_14640001 chr3L_14640001 KN35_1-HE 1872 chr3L 14665027 14665059 chr3L 14665153 14665185 18 126 4.5 4.5 4.5 3.3 158 chr3L 14665027 exon dlp + chr3L 14665106 intron dlp + chr3L 14665185 intron dlp + chr3L_18_14665001 chr3L_14665001 KN35_1-HE 1873 chr3L 14681457 14681485 chr3L 14684361 14684389 16 2906 34.0 27.5 30.8 0.5 2932 chr3L 14681457 intron ome + chr3L 14682923 intron ome + chr3L 14684389 intron ome + chr3L_16_14680001 chr3L_14680001 KN35_1-HE 1874 chr3L 14721182 14721203 chr3L 14723026 14723047 Rt1c 9 1844 5.5 6.0 5.8 1.3 1865 chr3L 14721182 intron ome + chr3L 14722114 intron ome + chr3L 14723047 intron ome + chr3L_9_14720001 chr3L_14720001 KN35_1-HE 1875 chr3L 14725598 14725620 chr3L 14728593 14728615 Doc 5 2995 3.0 7.5 5.2 0.8 3017 chr3L 14725598 intron ome + chr3L 14727106 intron ome + chr3L 14728615 intron ome + chr3L_5_14725001 chr3L_14725001 KN35_1-HE 1876 chr3L 14842910 14842926 chr3L 14842988 14843004 9 78 0.0 10.0 5.0 1.5 94 chr3L 14842910 intron CG17839 + chr3L 14842957 intron CG17839 + chr3L 14843004 intron CG17839 + chr3L_9_14840001 chr3L_14840001 KN35_1-HE 1877 chr3L 14866825 14866834 chr3L 14866917 14866926 4 92 4.5 9.5 7.0 0.5 101 chr3L 14866825 exon CG17839 + chr3L 14866876 intron CG17839 + chr3L 14866926 intron CG17839 + chr3L_4_14865001 chr3L_14865001 KN35_1-HE 1878 chr3L 14907414 14907442 chr3L 14907514 14907542 11 100 3.5 7.0 5.2 1.8 128 chr3L 14907414 intron DCX-EMAP + chr3L 14907478 intron DCX-EMAP + chr3L 14907542 intron DCX-EMAP + chr3L_11_14905001 chr3L_14905001 KN35_1-HE 1879 chr3L 14917659 14917696 chr3L 14917743 14917780 25 84 8.5 6.5 7.5 2.9 121 chr3L 14917659 intron DCX-EMAP + chr3L 14917720 intron DCX-EMAP + chr3L 14917780 intron DCX-EMAP + chr3L_25_14915001 chr3L_14915001 KN35_1-HE 1880 chr3L 14933447 14933455 chr3L 14933530 14933538 5 83 6.0 5.5 5.8 0.7 91 chr3L 14933447 intron DCX-EMAP + chr3L 14933492 intron DCX-EMAP + chr3L 14933538 intron DCX-EMAP + chr3L_5_14930001 chr3L_14930001 KN35_1-HE 1881 chr3L 15021650 15021677 chr3L 15021745 15021772 15 95 7.0 2.5 4.8 2.6 122 chr3L 15021650 intron Sytbeta - chr3L 15021711 intron Sytbeta - chr3L 15021772 intron Sytbeta - chr3L_15_15020001 chr3L_15020001 KN35_1-HE 1882 chr3L 15085052 15085085 chr3L 15086219 15086252 1360 23 1167 4.0 5.0 4.5 4.2 1200 chr3L 15085052 intron cp309 - chr3L 15085652 intron cp309 - chr3L 15086252 intron cp309 - chr3L_23_15085001 chr3L_15085001 KN35_1-HE 1883 chr3L 15165036 15165047 chr3L 15165136 15165147 5 100 0.0 0.0 0.0 5.0 111 chr3L 15165036 intergenic not near genes chr3L 15165092 intergenic not near genes chr3L 15165147 intergenic not near genes chr3L_5_15165001 chr3L_15165001 KN35_1-HE 1884 chr3L 15257434 15257441 chr3L 15257648 15257655 4 214 3.5 2.5 3.0 1.0 221 chr3L 15257434 intergenic not near genes chr3L 15257544 intergenic not near genes chr3L 15257655 intergenic not near genes chr3L_4_15255001 chr3L_15255001 KN35_1-HE 1885 chr3L 15358361 15358395 chr3L 15358493 15358527 23 132 7.0 7.5 7.2 2.8 166 chr3L 15358361 intergenic not near genes chr3L 15358444 intergenic not near genes chr3L 15358527 intergenic not near genes chr3L_23_15355001 chr3L_15355001 KN35_1-HE 1886 chr3L 15400809 15400844 chr3L 15400936 15400971 26 127 7.0 5.5 6.2 3.6 162 chr3L 15400809 intergenic not near genes chr3L 15400890 intergenic not near genes chr3L 15400971 intergenic not near genes chr3L_26_15400001 chr3L_15400001 KN35_1-HE 1887 chr3L 15406021 15406056 chr3L 15406105 15406140 15 82 3.5 4.5 4.0 3.0 119 chr3L 15406021 intergenic not near genes chr3L 15406080 intergenic not near genes chr3L 15406140 intergenic not near genes chr3L_15_15405001 chr3L_15405001 KN35_1-HE 1888 chr3L 15423759 15423784 chr3L 15426604 15426629 opus 21 2845 6.0 7.5 6.8 2.7 2870 chr3L 15423759 intergenic not near genes chr3L 15425194 intergenic not near genes chr3L 15426629 intergenic not near genes chr3L_21_15425001 chr3L_15425001 KN35_1-HE 1889 chr3L 15452313 15452320 chr3L 15452410 15452417 7 97 6.0 20.5 13.2 0.5 104 chr3L 15452313 intergenic not near genes chr3L 15452365 intergenic not near genes chr3L 15452417 intergenic not near genes chr3L_7_15450001 chr3L_15450001 KN35_1-HE 1890 chr3L 15460281 15460303 chr3L 15460558 15460586 18 286 44.5 25.0 34.8 0.5 305 chr3L 15460281 intergenic not near genes chr3L 15460434 intergenic not near genes chr3L 15460586 intergenic not near genes chr3L_18_15460001 chr3L_15460001 KN35_1-HE 1891 chr3L 15461704 15461733 chr3L 15461786 15461815 11 82 6.0 5.0 5.5 1.7 111 chr3L 15461704 intergenic not near genes chr3L 15461760 intergenic not near genes chr3L 15461815 intergenic not near genes chr3L_11_15460001 chr3L_15460001 KN35_1-HE 1892 chr3L 15466036 15466137 chr3L 15466119 15466234 13 86 0.0 0.0 0.0 13.0 198 chr3L 15466036 intergenic not near genes chr3L 15466135 intergenic not near genes chr3L 15466234 intergenic not near genes chr3L_13_15465001 chr3L_15465001 KN35_1-HE 1893 chr3L 15466517 15466551 chr3L 15466602 15466636 14 85 3.0 1.5 2.2 4.4 119 chr3L 15466517 intergenic not near genes chr3L 15466576 intergenic not near genes chr3L 15466636 intergenic not near genes chr3L_14_15465001 chr3L_15465001 KN35_1-HE 1894 chr3L 15515649 15515678 chr3L 15515796 15515825 12 147 3.0 2.5 2.8 3.2 176 chr3L 15515649 intergenic not near genes chr3L 15515737 intergenic not near genes chr3L 15515825 intergenic not near genes chr3L_12_15515001 chr3L_15515001 KN35_1-HE 1895 chr3L 15541619 15541651 chr3L 15541711 15541743 12 92 5.0 5.5 5.2 1.9 124 chr3L 15541619 intron CrebA + chr3L 15541681 intron CrebA + chr3L 15541743 intron CrebA + chr3L_12_15540001 chr3L_15540001 KN35_1-HE 1896 chr3L 15541947 15541981 chr3L 15542042 15542076 17 95 2.5 4.5 3.5 3.8 129 chr3L 15541947 intron CrebA + chr3L 15542012 intron CrebA + chr3L 15542076 intron CrebA + chr3L_17_15540001 chr3L_15540001 KN35_1-HE 1897 chr3L 15633180 15633216 chr3L 15633261 15633297 16 81 1.0 1.0 1.0 8.0 117 chr3L 15633180 intron comm3 - chr3L 15633238 intron comm3 - chr3L 15633297 intron comm3 - chr3L_16_15630001 chr3L_15630001 KN35_1-HE 1898 chr3L 15641807 15641814 chr3L 15641893 15641900 6 86 0.0 5.0 2.5 1.7 93 chr3L 15641807 intron comm3 - chr3L 15641854 intron comm3 - chr3L 15641900 intron comm3 - chr3L_6_15640001 chr3L_15640001 KN35_1-HE 1899 chr3L 15691431 15691445 chr3L 15691503 15691507 13 78 6.5 7.0 6.8 1.7 76 chr3L 15691431 intron CG34451 - chr3L 15691469 intron CG34451 - chr3L 15691507 intron CG34451 - chr3L_13_15690001 chr3L_15690001 KN35_1-HE 1900 chr3L 15732123 15732139 chr3L 15732205 15732221 14 82 13.0 0.0 6.5 1.9 98 chr3L 15732123 intergenic not near genes chr3L 15732172 intergenic not near genes chr3L 15732221 intergenic not near genes chr3L_14_15730001 chr3L_15730001 KN35_1-HE 1901 chr3L 15769001 15769008 chr3L 15769113 15769120 5 112 4.0 0.0 2.0 1.7 119 chr3L 15769001 intergenic not near genes chr3L 15769060 intergenic not near genes chr3L 15769120 intergenic not near genes chr3L_5_15765001 chr3L_15765001 KN35_1-HE 1902 chr3L 15776772 15776782 chr3L 15776849 15776859 5 77 5.0 8.0 6.5 0.7 87 chr3L 15776772 intergenic not near genes chr3L 15776816 intergenic not near genes chr3L 15776859 intergenic not near genes chr3L_5_15775001 chr3L_15775001 KN35_1-HE 1903 chr3L 15781683 15781688 chr3L 15781833 15781838 6 150 0.0 0.0 0.0 6.0 155 chr3L 15781683 intergenic not near genes chr3L 15781760 intergenic not near genes chr3L 15781838 intergenic not near genes chr3L_6_15780001 chr3L_15780001 KN35_1-HE 1904 chr3L 15840433 15840469 chr3L 15840522 15840555 6 88 3.5 1.5 2.5 1.7 122 chr3L 15840433 intron CG32150 - chr3L 15840494 intron CG32150 - chr3L 15840555 intron CG32150 - chr3L_6_15840001 chr3L_15840001 KN35_1-HE 1905 chr3L 15871591 15871614 chr3L 15871676 15871699 17 85 5.0 0.0 2.5 4.9 108 chr3L 15871591 intron pHCl - chr3L 15871645 intron pHCl - chr3L 15871699 intron pHCl - chr3L_17_15870001 chr3L_15870001 KN35_1-HE 1906 chr3L 15891205 15891235 chr3L 15891322 15891352 10 117 4.5 3.5 4.0 2.0 147 chr3L 15891205 intron pHCl - chr3L 15891278 intron pHCl - chr3L 15891352 intron pHCl - chr3L_10_15890001 chr3L_15890001 KN35_1-HE 1907 chr3L 15899233 15899260 chr3L 15899797 15899828 jockey 7 567 0.5 6.5 3.5 1.6 595 chr3L 15899233 intergenic pHCl - chr3L 15899530 intergenic not near genes chr3L 15899828 intergenic sff - chr3L_7_15895001 chr3L_15895001 KN35_1-HE 1908 chr3L 15929222 15929230 chr3L 15938370 15938378 roo 6 9148 0.0 6.5 3.2 1.4 9156 chr3L 15929222 intron Pka-C3 - chr3L 15933800 intron Pka-C3 - chr3L 15938378 intron Pka-C3 - chr3L_6_15930001 chr3L_15930001 KN35_1-HE 1909 chr3L 16057040 16057055 chr3L 16057201 16057216 10 161 3.0 6.0 4.5 1.8 176 chr3L 16057040 intron Mbs + chr3L 16057128 intron Mbs + chr3L 16057216 intron Mbs + chr3L_10_16055001 chr3L_16055001 KN35_1-HE 1910 chr3L 16070740 16070760 chr3L 16070818 16070838 12 78 6.5 5.5 6.0 1.7 98 chr3L 16070740 intron Mbs + chr3L 16070789 intron Mbs + chr3L 16070838 exon Mbs + chr3L_12_16070001 chr3L_16070001 KN35_1-HE 1911 chr3L 16154871 16154905 chr3L 16155008 16155041 13 136 4.5 3.5 4.0 2.6 170 chr3L 16154871 intron CG5151 - chr3L 16154956 intron CG5151 - chr3L 16155041 intron CG5151 - chr3L_13_16150001 chr3L_16150001 KN35_1-HE 1912 chr3L 16162594 16162628 chr3L 16162679 16162713 14 85 6.0 9.0 7.5 1.6 119 chr3L 16162594 intron CG5151 - chr3L 16162654 intron CG5151 - chr3L 16162713 intron CG5151 - chr3L_14_16160001 chr3L_16160001 KN35_1-HE 1913 chr3L 16184103 16184132 chr3L 16188923 16188952 X-element 15 4820 9.0 9.0 9.0 1.5 4849 chr3L 16184103 intergenic not near genes chr3L 16186528 intergenic not near genes chr3L 16188952 intergenic not near genes chr3L_15_16185001 chr3L_16185001 KN35_1-HE 1914 chr3L 16212811 16212843 chr3L 16212903 16212935 17 92 3.0 3.5 3.2 4.0 124 chr3L 16212811 intergenic CG13073 - chr3L 16212873 intergenic CG13073 - chr3L 16212935 intergenic CG13073 - chr3L_17_16210001 chr3L_16210001 KN35_1-HE 1915 chr3L 16235001 16235036 chr3L 16235091 16235126 12 90 4.0 1.5 2.8 3.2 125 chr3L 16235001 intron l(3)72Dp + chr3L 16235064 intron l(3)72Dp + chr3L 16235126 intron l(3)72Dp + chr3L_12_16235001 chr3L_16235001 KN35_1-HE 1916 chr3L 16273058 16273088 chr3L 16273153 16273183 8 95 3.0 4.0 3.5 1.8 125 chr3L 16273058 intron CG13066 + chr3L 16273120 intron CG13066 + chr3L 16273183 exon CG13066 + chr3L_8_16270001 chr3L_16270001 KN35_1-HE 1917 chr3L 16289654 16289690 chr3L 16289735 16289771 23 81 5.0 2.5 3.8 4.8 117 chr3L 16289654 intergenic CG13045 - chr3L 16289712 3` UTR CG13045 - chr3L 16289771 3` UTR CG13045 - chr3L_23_16285001 chr3L_16285001 KN35_1-HE 1918 chr3L 16304866 16304892 chr3L 16304945 16304971 12 79 3.5 3.5 3.5 2.7 105 chr3L 16304866 intergenic CG43249 +,CG13043 - chr3L 16304918 intergenic CG43249 +,CG13043 - chr3L 16304971 intergenic CG13043 -,CG43249 + chr3L_12_16300001 chr3L_16300001 KN35_1-HE 1919 chr3L 16364347 16364379 chr3L 16364438 16364470 15 91 3.5 3.0 3.2 3.6 123 chr3L 16364347 intergenic not near genes chr3L 16364408 intergenic Cpr72Eb + chr3L 16364470 intergenic Cpr72Eb + chr3L_15_16360001 chr3L_16360001 KN35_1-HE 1920 chr3L 16437067 16437094 chr3L 16437147 16437173 12 80 5.5 5.0 5.2 1.9 106 chr3L 16437067 intron,intron CG33158 +,dsx-c73A - chr3L 16437120 intron,intron CG33158 +,dsx-c73A - chr3L 16437173 intron,intron CG33158 +,dsx-c73A - chr3L_12_16435001 chr3L_16435001 KN35_1-HE 1921 chr3L 16443847 16443879 chr3L 16446188 16446220 Doc 27 2341 6.5 7.5 7.0 3.4 2373 chr3L 16443847 intron,intron CG33158 +,dsx-c73A - chr3L 16445034 intron,intron CG33158 +,dsx-c73A - chr3L 16446220 intron,intron CG33158 +,dsx-c73A - chr3L_27_16445001 chr3L_16445001 KN35_1-HE 1922 chr3L 16493973 16494012 chr3L 16494491 16494530 jockey 26 518 7.5 6.5 7.0 3.2 557 chr3L 16493973 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494252 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494530 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_26_16490001 chr3L_16490001 KN35_1-HE 1923 chr3L 16503625 16503658 chr3L 16503703 16503736 9 78 5.0 2.0 3.5 2.0 111 chr3L 16503625 intron CG43373 - chr3L 16503680 intron CG43373 - chr3L 16503736 intron CG43373 - chr3L_9_16500001 chr3L_16500001 KN35_1-HE 1924 chr3L 16540051 16540087 chr3L 16540140 16540176 10 89 4.0 2.5 3.2 2.4 125 chr3L 16540051 intron CG43373 - chr3L 16540114 intron CG43373 - chr3L 16540176 intron CG43373 - chr3L_10_16540001 chr3L_16540001 KN35_1-HE 1925 chr3L 16563235 16563257 chr3L 16563317 16563339 13 82 4.0 0.0 2.0 4.3 104 chr3L 16563235 intergenic Mipp1 - chr3L 16563287 intergenic Mipp1 - chr3L 16563339 intergenic Mipp1 - chr3L_13_16560001 chr3L_16560001 KN35_1-HE 1926 chr3L 16616508 16616537 chr3L 16621837 16621866 297 7 5329 4.0 2.0 3.0 1.8 5358 chr3L 16616508 3` UTR Abl - chr3L 16619187 3` UTR Abl - chr3L 16621866 3` UTR Abl - chr3L_7_16615001 chr3L_16615001 KN35_1-HE 1927 chr3L 16684018 16684052 chr3L 16689240 16689274 copia 23 5222 7.5 13.0 10.2 2.1 5256 chr3L 16684018 intron,intron Lasp -,CG43954 - chr3L 16686646 intron,intron Lasp -,CG43954 - chr3L 16689274 intron,intron,5` UTR Lasp -,CG43954 -,CR45179 + chr3L_23_16685001 chr3L_16685001 KN35_1-HE 1928 chr3L 16772491 16772513 chr3L 16772582 16772604 13 91 4.5 6.5 5.5 2.0 113 chr3L 16772491 intron Nrt + chr3L 16772548 intron Nrt + chr3L 16772604 intron Nrt + chr3L_13_16770001 chr3L_16770001 KN35_1-HE 1929 chr3L 16808043 16808067 chr3L 16808120 16808144 10 77 4.5 0.0 2.2 3.1 101 chr3L 16808043 intron nudC + chr3L 16808094 intron nudC + chr3L 16808144 intron nudC + chr3L_10_16805001 chr3L_16805001 KN35_1-HE 1930 chr3L 16817873 16817908 chr3L 16818014 16818049 13 141 6.0 4.0 5.0 2.2 176 chr3L 16817873 intron,intron nudC +,CG13024 - chr3L 16817961 intron,intron nudC +,CG13024 - chr3L 16818049 intron,intron nudC +,CG13024 - chr3L_13_16815001 chr3L_16815001 KN35_1-HE 1931 chr3L 16845024 16845042 chr3L 16845134 16845156 7 113 9.0 9.0 9.0 0.7 132 chr3L 16845024 intergenic CG9669 -,CG9715 +,TSG101 + chr3L 16845090 intergenic CG9669 -,CG9715 + chr3L 16845156 intergenic CG9669 -,CG9715 + chr3L_7_16845001 chr3L_16845001 KN35_1-HE 1932 chr3L 16861029 16861052 chr3L 16861132 16861155 7 103 3.5 6.5 5.0 1.2 126 chr3L 16861029 intron,exon Rh4 -,CG13029 + chr3L 16861092 intron,intron Rh4 -,CG13029 + chr3L 16861155 intron,exon Rh4 -,CG13029 + chr3L_7_16860001 chr3L_16860001 KN35_1-HE 1933 chr3L 16873338 16873357 chr3L 16873444 16873463 6 106 7.5 5.0 6.2 0.8 125 chr3L 16873338 intron Lmpt + chr3L 16873400 intron Lmpt + chr3L 16873463 intron Lmpt + chr3L_6_16870001 chr3L_16870001 KN35_1-HE 1934 chr3L 16945727 16945758 chr3L 16954881 16954912 roo 24 9154 10.0 5.5 7.8 2.7 9185 chr3L 16945727 exon Obp73a + chr3L 16950320 intergenic not near genes chr3L 16954912 5` UTR Nc73EF + chr3L_24_16950001 chr3L_16950001 KN35_1-HE 1935 chr3L 17000807 17000842 chr3L 17001258 17001293 18 451 33.0 32.5 32.8 0.5 486 chr3L 17000807 intron CG3764 - chr3L 17001050 intron CG3764 - chr3L 17001293 intron CG3764 - chr3L_18_17000001 chr3L_17000001 KN35_1-HE 1936 chr3L 17034937 17034962 chr3L 17035126 17035151 G2 7 189 4.5 3.5 4.0 1.4 214 chr3L 17034937 intergenic not near genes chr3L 17035044 intergenic not near genes chr3L 17035151 intergenic not near genes chr3L_7_17035001 chr3L_17035001 KN35_1-HE 1937 chr3L 17085001 17085037 chr3L 17094151 17094187 roo 31 9150 8.0 8.0 8.0 3.4 9186 chr3L 17085001 intron Rbp6 - chr3L 17089594 intron Rbp6 - chr3L 17094187 intron Rbp6 - chr3L_31_17085001 chr3L_17085001 KN35_1-HE 1938 chr3L 17141092 17141112 chr3L 17141170 17141190 9 78 0.5 4.0 2.2 2.8 98 chr3L 17141092 intron Rbp6 - chr3L 17141141 intron Rbp6 - chr3L 17141190 intron Rbp6 - chr3L_9_17140001 chr3L_17140001 KN35_1-HE 1939 chr3L 17149162 17149182 chr3L 17149244 17149264 13 82 5.0 0.0 2.5 3.7 102 chr3L 17149162 intron Rbp6 - chr3L 17149213 intron Rbp6 - chr3L 17149264 intron Rbp6 - chr3L_13_17145001 chr3L_17145001 KN35_1-HE 1940 chr3L 17174084 17174109 chr3L 17174168 17174193 16 84 2.5 4.5 3.5 3.6 109 chr3L 17174084 intron Rbp6 - chr3L 17174138 intron Rbp6 - chr3L 17174193 intron Rbp6 - chr3L_16_17170001 chr3L_17170001 KN35_1-HE 1941 chr3L 17261521 17261550 chr3L 17261602 17261631 16 81 3.5 4.0 3.8 3.3 110 chr3L 17261521 intron CR43870 + chr3L 17261576 intron CR43870 + chr3L 17261631 intron CR43870 + chr3L_16_17260001 chr3L_17260001 KN35_1-HE 1942 chr3L 17272241 17272261 chr3L 17272375 17272395 7 134 4.0 2.5 3.2 1.7 154 chr3L 17272241 intergenic not near genes chr3L 17272318 intergenic not near genes chr3L 17272395 intergenic not near genes chr3L_7_17270001 chr3L_17270001 KN35_1-HE 1943 chr3L 14145945 14145947 chr3L 17358189 17358191 4 3212244 14.5 6.0 10.2 0.4 3212246 chr3L 14145945 intergenic not near genes chr3L 15752068 intergenic not near genes chr3L 17358191 intergenic CG7692 + chr3L_4_15750001 chr3L_15750001 KN35_1-HE 1944 chr3L 17367438 17367453 chr3L 17367533 17367548 6 95 4.0 4.5 4.2 1.2 110 chr3L 17367438 intergenic CR45688 +,Cad74A - chr3L 17367493 intergenic CR45688 +,Cad74A - chr3L 17367548 intergenic CR45688 +,Cad74A - chr3L_6_17365001 chr3L_17365001 KN35_1-HE 1945 chr3L 17418352 17418375 chr3L 17418733 17418756 10 381 6.0 8.0 7.0 1.2 404 chr3L 17418352 intron blot - chr3L 17418554 intron blot - chr3L 17418756 intron blot - chr3L_10_17415001 chr3L_17415001 KN35_1-HE 1946 chr3L 17461108 17461124 chr3L 17461195 17461211 8 87 7.5 7.0 7.2 1.0 103 chr3L 17461108 intergenic not near genes chr3L 17461160 intergenic not near genes chr3L 17461211 intergenic not near genes chr3L_8_17460001 chr3L_17460001 KN35_1-HE 1947 chr3L 17498099 17498114 chr3L 17498177 17498192 16 78 6.0 3.5 4.8 2.8 93 chr3L 17498099 intron Oatp74D + chr3L 17498146 intron Oatp74D + chr3L 17498192 intron Oatp74D + chr3L_16_17495001 chr3L_17495001 KN35_1-HE 1948 chr3L 17501509 17501544 chr3L 17501586 17501621 11 77 1.5 3.0 2.2 3.4 112 chr3L 17501509 intron Oatp74D + chr3L 17501565 intron Oatp74D + chr3L 17501621 intron Oatp74D + chr3L_11_17500001 chr3L_17500001 KN35_1-HE 1949 chr3L 17510745 17510766 chr3L 17510830 17510851 8 85 4.5 8.5 6.5 1.1 106 chr3L 17510745 exon Oatp74D + chr3L 17510798 intron Oatp74D + chr3L 17510851 intron Oatp74D + chr3L_8_17510001 chr3L_17510001 KN35_1-HE 1950 chr3L 17516977 17517010 chr3L 17524536 17524569 412 14 7559 5.5 1.0 3.2 3.3 7592 chr3L 17516977 intron CG7564 + chr3L 17520773 intron CG7564 + chr3L 17524569 3` UTR CG7564 + chr3L_14_17520001 chr3L_17520001 KN35_1-HE 1951 chr3L 17645298 17645335 chr3L 17645376 17645413 14 78 3.0 5.0 4.0 2.8 115 chr3L 17645298 intergenic CG43085 -,Pep - chr3L 17645356 intergenic CG43085 -,Pep - chr3L 17645413 intergenic CG43085 -,Pep - chr3L_14_17645001 chr3L_17645001 KN35_1-HE 1952 chr3L 17786823 17786948 chr3L 17786926 17787026 17 79 5.0 15.5 10.2 1.5 203 chr3L 17786823 intergenic not near genes chr3L 17786924 intergenic not near genes chr3L 17787026 intergenic not near genes chr3L_17_17785001 chr3L_17785001 KN35_1-HE 1953 chr3L 17790451 17790623 chr3L 17790593 17790889 16 150 0.0 0.0 0.0 16.0 438 chr3L 17790451 intergenic not near genes chr3L 17790670 intergenic CG42815 - chr3L 17790889 intergenic CG42815 - chr3L_16_17790001 chr3L_17790001 KN35_1-HE 1954 chr3L 17790627 17790633 chr3L 17790893 17790899 6 266 0.0 10.0 5.0 1.0 272 chr3L 17790627 intergenic CG42815 - chr3L 17790763 intergenic CG42815 - chr3L 17790899 intergenic CG42815 - chr3L_6_17790001 chr3L_17790001 KN35_1-HE 1955 chr3L 17791201 17791224 chr3L 17791607 17791630 9 406 2.0 2.5 2.2 2.8 429 chr3L 17791201 exon CG42815 - chr3L 17791416 exon CG42815 - chr3L 17791630 intergenic CG42815 -,CG42816 - chr3L_9_17790001 chr3L_17790001 KN35_1-HE 1956 chr3L 17799808 17799841 chr3L 17801596 17801629 S-element 19 1788 4.5 3.0 3.8 4.0 1821 chr3L 17799808 intron NUCB1 - chr3L 17800718 intron NUCB1 - chr3L 17801629 intron NUCB1 - chr3L_19_17800001 chr3L_17800001 KN35_1-HE 1957 chr3L 17823697 17823723 chr3L 17825178 17825204 6 1481 1.0 4.5 2.8 1.6 1507 chr3L 17823697 intron Grd + chr3L 17824450 intron Grd + chr3L 17825204 intron Grd + chr3L_6_17820001 chr3L_17820001 KN35_1-HE 1958 chr3L 17834320 17834358 chr3L 17834485 17834523 20 165 6.0 7.0 6.5 2.7 203 chr3L 17834320 intron Grd + chr3L 17834422 intron Grd + chr3L 17834523 intron Grd + chr3L_20_17830001 chr3L_17830001 KN35_1-HE 1959 chr3L 17837623 17837656 chr3L 17837712 17837745 17 89 3.0 4.0 3.5 3.8 122 chr3L 17837623 exon Grd + chr3L 17837684 intron Grd + chr3L 17837745 exon Grd + chr3L_17_17835001 chr3L_17835001 KN35_1-HE 1960 chr3L 17918374 17918380 chr3L 17921177 17921183 opus 4 2804 8.5 2.0 5.2 0.6 2809 chr3L 17918374 intergenic not near genes chr3L 17919778 intergenic not near genes chr3L 17921183 intergenic not near genes chr3L_4_17915001 chr3L_17915001 KN35_1-HE 1961 chr3L 17957053 17957077 chr3L 17957144 17957168 10 91 3.5 3.5 3.5 2.2 115 chr3L 17957053 intron Eip75B - chr3L 17957110 intron Eip75B - chr3L 17957168 intron Eip75B - chr3L_10_17955001 chr3L_17955001 KN35_1-HE 1962 chr3L 17968134 17968167 chr3L 17968216 17968249 23 82 2.0 6.0 4.0 4.6 115 chr3L 17968134 intron Eip75B - chr3L 17968192 intron Eip75B - chr3L 17968249 intron Eip75B - chr3L_23_17965001 chr3L_17965001 KN35_1-HE 1963 chr3L 18006219 18006251 chr3L 18006344 18006376 13 125 2.0 5.0 3.5 2.9 157 chr3L 18006219 intron Eip75B - chr3L 18006298 intron Eip75B - chr3L 18006376 intron Eip75B - chr3L_13_18005001 chr3L_18005001 KN35_1-HE 1964 chr3L 18029959 18029986 chr3L 18030037 18030064 13 78 3.0 0.0 1.5 5.2 105 chr3L 18029959 intron Eip75B - chr3L 18030012 intron Eip75B - chr3L 18030064 intron Eip75B - chr3L_13_18030001 chr3L_18030001 KN35_1-HE 1965 chr3L 18047705 18047740 chr3L 18056763 18056798 roo 7 9058 4.0 5.5 4.8 1.2 9093 chr3L 18047705 intron Eip75B - chr3L 18052252 intron Eip75B - chr3L 18056798 intron Eip75B - chr3L_7_18050001 chr3L_18050001 KN35_1-HE 1966 chr3L 18092779 18092805 chr3L 18092895 18092921 17 116 5.0 0.0 2.5 4.9 142 chr3L 18092779 intron CG13698 - chr3L 18092850 intron CG13698 - chr3L 18092921 intron CG13698 - chr3L_17_18090001 chr3L_18090001 KN35_1-HE 1967 chr3L 18135696 18135705 chr3L 18135788 18135797 4 92 2.5 0.0 1.2 1.8 101 chr3L 18135696 intergenic CR44669 - chr3L 18135746 intergenic CR44669 - chr3L 18135797 3` UTR CR44669 - chr3L_4_18135001 chr3L_18135001 KN35_1-HE 1968 chr3L 18150317 18150344 chr3L 18150415 18150442 15 98 4.0 6.0 5.0 2.5 125 chr3L 18150317 intron CG7330 + chr3L 18150380 intron CG7330 + chr3L 18150442 intron CG7330 + chr3L_15_18150001 chr3L_18150001 KN35_1-HE 1969 chr3L 18152747 18152750 chr3L 18152855 18152861 7 111 3.0 5.0 4.0 1.4 114 chr3L 18152747 intron CG7330 + chr3L 18152804 intron CG7330 + chr3L 18152861 intron CG7330 + chr3L_7_18150001 chr3L_18150001 KN35_1-HE 1970 chr3L 18172688 18172701 chr3L 18172765 18172778 11 77 9.5 9.5 9.5 1.0 90 chr3L 18172688 intron W - chr3L 18172733 intron W - chr3L 18172778 intron W - chr3L_11_18170001 chr3L_18170001 KN35_1-HE 1971 chr3L 18175814 18175836 chr3L 18176054 18176076 10 240 3.0 3.5 3.2 2.4 262 chr3L 18175814 intron W - chr3L 18175945 intron W - chr3L 18176076 intron W - chr3L_10_18175001 chr3L_18175001 KN35_1-HE 1972 chr3L 18203594 18203605 chr3L 18203690 18203701 6 96 7.5 0.0 3.8 1.2 107 chr3L 18203594 3` UTR CG7320 + chr3L 18203648 intergenic CG7320 + chr3L 18203701 intergenic CG7320 + chr3L_6_18200001 chr3L_18200001 KN35_1-HE 1973 chr3L 18208296 18208323 chr3L 18208385 18208412 14 89 7.0 4.0 5.5 2.2 116 chr3L 18208296 intergenic not near genes chr3L 18208354 intergenic not near genes chr3L 18208412 intergenic not near genes chr3L_14_18205001 chr3L_18205001 KN35_1-HE 1974 chr3L 18210740 18210750 chr3L 18210817 18210827 10 77 2.0 10.0 6.0 1.4 87 chr3L 18210740 intergenic not near genes chr3L 18210784 intergenic not near genes chr3L 18210827 intergenic not near genes chr3L_10_18210001 chr3L_18210001 KN35_1-HE 1975 chr3L 18223165 18223174 chr3L 18223249 18223258 6 84 0.0 0.0 0.0 6.0 93 chr3L 18223165 intergenic not near genes chr3L 18223212 intergenic not near genes chr3L 18223258 intergenic not near genes chr3L_6_18220001 chr3L_18220001 KN35_1-HE 1976 chr3L 18247814 18247818 chr3L 18247893 18247897 4 79 0.0 0.0 0.0 4.0 83 chr3L 18247814 intergenic not near genes chr3L 18247856 intergenic not near genes chr3L 18247897 intergenic not near genes chr3L_4_18245001 chr3L_18245001 KN35_1-HE 1977 chr3L 18248951 18248985 chr3L 18249050 18249084 16 99 1.0 4.5 2.8 4.2 133 chr3L 18248951 intergenic not near genes chr3L 18249018 intergenic not near genes chr3L 18249084 intergenic not near genes chr3L_16_18245001 chr3L_18245001 KN35_1-HE 1978 chr3L 18262472 18262489 chr3L 18262556 18262573 7 84 3.0 6.0 4.5 1.3 101 chr3L 18262472 intergenic not near genes chr3L 18262522 intergenic not near genes chr3L 18262573 intergenic not near genes chr3L_7_18260001 chr3L_18260001 KN35_1-HE 1979 chr3L 18321082 18321105 chr3L 18321170 18321193 14 88 5.0 10.0 7.5 1.6 111 chr3L 18321082 intergenic not near genes chr3L 18321138 intergenic not near genes chr3L 18321193 intergenic not near genes chr3L_14_18320001 chr3L_18320001 KN35_1-HE 1980 chr3L 18359592 18359630 chr3L 18359685 18359723 26 93 6.0 5.5 5.8 3.8 131 chr3L 18359592 intergenic not near genes chr3L 18359658 intergenic not near genes chr3L 18359723 intergenic not near genes chr3L_26_18355001 chr3L_18355001 KN35_1-HE 1981 chr3L 18408744 18408756 chr3L 18408831 18408843 9 87 0.0 12.5 6.2 1.2 99 chr3L 18408744 intergenic not near genes chr3L 18408794 intergenic not near genes chr3L 18408843 intergenic not near genes chr3L_9_18405001 chr3L_18405001 KN35_1-HE 1982 chr3L 18436059 18436090 chr3L 18436158 18436189 8 99 3.0 5.5 4.2 1.5 130 chr3L 18436059 intergenic not near genes chr3L 18436124 intergenic not near genes chr3L 18436189 intergenic not near genes chr3L_8_18435001 chr3L_18435001 KN35_1-HE 1983 chr3L 18445248 18445283 chr3L 18445327 18445362 12 79 3.0 0.5 1.8 4.3 114 chr3L 18445248 intergenic not near genes chr3L 18445305 intergenic not near genes chr3L 18445362 intergenic not near genes chr3L_12_18445001 chr3L_18445001 KN35_1-HE 1984 chr3L 18456271 18456302 chr3L 18456360 18456391 17 89 9.0 5.0 7.0 2.1 120 chr3L 18456271 intergenic CR44670 - chr3L 18456331 intergenic CR44670 - chr3L 18456391 intergenic CR44670 - chr3L_17_18455001 chr3L_18455001 KN35_1-HE 1985 chr3L 18500859 18500888 chr3L 18500939 18500968 18 79 4.0 6.5 5.2 2.9 109 chr3L 18500859 intron AstC-R2 - chr3L 18500914 intron AstC-R2 - chr3L 18500968 intron AstC-R2 - chr3L_18_18500001 chr3L_18500001 KN35_1-HE 1986 chr3L 18506132 18506163 chr3L 18509596 18509627 F-element 14 3464 4.0 2.5 3.2 3.3 3495 chr3L 18506132 intergenic not near genes chr3L 18507880 intergenic not near genes chr3L 18509627 intergenic not near genes chr3L_14_18505001 chr3L_18505001 KN35_1-HE 1987 chr3L 18528624 18528661 chr3L 18537786 18537823 roo 21 9162 7.0 8.0 7.5 2.5 9199 chr3L 18528624 intergenic not near genes chr3L 18533224 intergenic not near genes chr3L 18537823 intergenic not near genes chr3L_21_18530001 chr3L_18530001 KN35_1-HE 1988 chr3L 18582216 18582245 chr3L 18582302 18582331 12 86 8.0 3.0 5.5 1.8 115 chr3L 18582216 intergenic not near genes chr3L 18582274 intergenic not near genes chr3L 18582331 intergenic not near genes chr3L_12_18580001 chr3L_18580001 KN35_1-HE 1989 chr3L 18593945 18593981 chr3L 18595926 18595962 Doc 13 1981 4.5 0.0 2.2 4.1 2017 chr3L 18593945 intergenic term - chr3L 18594954 intergenic not near genes chr3L 18595962 intergenic CR45389 + chr3L_13_18590001 chr3L_18590001 KN35_1-HE 1990 chr3L 18638576 18638602 chr3L 18638671 18638697 6 95 0.5 4.0 2.2 1.9 121 chr3L 18638576 intron MYPT-75D + chr3L 18638636 intron MYPT-75D + chr3L 18638697 intron MYPT-75D + chr3L_6_18635001 chr3L_18635001 KN35_1-HE 1991 chr3L 18656181 18656218 chr3L 18656267 18656304 17 86 5.5 4.0 4.8 2.9 123 chr3L 18656181 intron MYPT-75D + chr3L 18656242 intron MYPT-75D + chr3L 18656304 intron MYPT-75D + chr3L_17_18655001 chr3L_18655001 KN35_1-HE 1992 chr3L 18675189 18675224 chr3L 18675318 18675353 22 129 3.0 2.0 2.5 6.3 164 chr3L 18675189 intron GNBP2 - chr3L 18675271 exon GNBP2 - chr3L 18675353 5` UTR GNBP2 - chr3L_22_18675001 chr3L_18675001 KN35_1-HE 1993 chr3L 18677884 18677919 chr3L 18677980 18678015 7 96 2.0 2.5 2.2 2.2 131 chr3L 18677884 intergenic GNBP1 + chr3L 18677950 intergenic GNBP1 + chr3L 18678015 intergenic GNBP1 + chr3L_7_18675001 chr3L_18675001 KN35_1-HE 1994 chr3L 18696072 18696101 chr3L 18696192 18696221 15 120 5.5 4.5 5.0 2.5 149 chr3L 18696072 intergenic Dic4 -,CG6893 + chr3L 18696146 intergenic Dic4 -,CG6893 + chr3L 18696221 intergenic Dic4 - chr3L_15_18695001 chr3L_18695001 KN35_1-HE 1995 chr3L 18710756 18710792 chr3L 18718709 18718745 Stalker2 20 7953 2.5 4.5 3.5 4.4 7989 chr3L 18710756 intergenic not near genes chr3L 18714750 intergenic not near genes chr3L 18718745 intergenic not near genes chr3L_20_18710001 chr3L_18710001 KN35_1-HE 1996 chr3L 18721769 18721805 chr3L 18721861 18721897 17 92 3.5 6.5 5.0 2.8 128 chr3L 18721769 intergenic CG12477 - chr3L 18721833 intergenic CG12477 - chr3L 18721897 3` UTR CG12477 - chr3L_17_18720001 chr3L_18720001 KN35_1-HE 1997 chr3L 18733577 18733609 chr3L 18733697 18733730 9 121 5.0 10.0 7.5 1.1 153 chr3L 18733577 intergenic not near genes chr3L 18733654 intergenic not near genes chr3L 18733730 intergenic not near genes chr3L_9_18730001 chr3L_18730001 KN35_1-HE 1998 chr3L 18772408 18772441 chr3L 18781090 18781123 roo 23 8682 9.5 6.5 8.0 2.6 8715 chr3L 18772408 intron ftz-f1 - chr3L 18776766 intron ftz-f1 - chr3L 18781123 intron ftz-f1 - chr3L_23_18775001 chr3L_18775001 KN35_1-HE 1999 chr3L 18797327 18797334 chr3L 18797412 18797419 5 85 3.5 10.0 6.8 0.6 92 chr3L 18797327 intron ftz-f1 - chr3L 18797373 intron ftz-f1 - chr3L 18797419 intron ftz-f1 - chr3L_5_18795001 chr3L_18795001 KN35_1-HE 2000 chr3L 18896770 18896788 chr3L 18896899 18896924 7 135 2.5 5.0 3.8 1.5 154 chr3L 18896770 intron CG3902 - chr3L 18896847 intron CG3902 - chr3L 18896924 intron CG3902 - chr3L_7_18895001 chr3L_18895001 KN35_1-HE 2001 chr3L 18963980 18964014 chr3L 18964077 18964111 22 96 2.0 5.0 3.5 4.9 131 chr3L 18963980 intergenic not near genes chr3L 18964046 intergenic not near genes chr3L 18964111 intergenic not near genes chr3L_22_18960001 chr3L_18960001 KN35_1-HE 2002 chr3L 18969548 18969577 chr3L 18969625 18969654 18 77 4.0 3.5 3.8 3.8 106 chr3L 18969548 intergenic not near genes chr3L 18969601 intergenic not near genes chr3L 18969654 intergenic not near genes chr3L_18_18965001 chr3L_18965001 KN35_1-HE 2003 chr3L 18974007 18974043 chr3L 18974235 18974271 15 228 3.0 4.5 3.8 3.1 264 chr3L 18974007 intergenic not near genes chr3L 18974139 intergenic not near genes chr3L 18974271 intergenic not near genes chr3L_15_18970001 chr3L_18970001 KN35_1-HE 2004 chr3L 19008844 19008867 chr3L 19009183 19009206 jockey 15 339 15.0 8.0 11.5 1.2 362 chr3L 19008844 intron nkd - chr3L 19009025 intron nkd - chr3L 19009206 intron nkd - chr3L_15_19005001 chr3L_19005001 KN35_1-HE 2005 chr3L 19074749 19074777 chr3L 19074890 19074918 9 141 5.0 3.0 4.0 1.8 169 chr3L 19074749 intron Mkp3 - chr3L 19074834 intron Mkp3 - chr3L 19074918 intron Mkp3 - chr3L_9_19070001 chr3L_19070001 KN35_1-HE 2006 chr3L 19082038 19082071 chr3L 19082141 19082174 15 103 9.5 9.5 9.5 1.4 136 chr3L 19082038 intron Mkp3 - chr3L 19082106 intron Mkp3 - chr3L 19082174 intron Mkp3 - chr3L_15_19080001 chr3L_19080001 KN35_1-HE 2007 chr3L 19117039 19117076 chr3L 19124487 19124524 mdg1 18 7447 6.5 6.5 6.5 2.4 7485 chr3L 19117039 intron CG14082 - chr3L 19120782 intron CG14082 - chr3L 19124524 intron CG14082 - chr3L_18_19120001 chr3L_19120001 KN35_1-HE 2008 chr3L 19127364 19127398 chr3L 19127441 19127475 18 76 3.0 4.0 3.5 4.0 111 chr3L 19127364 intron CG14082 - chr3L 19127420 intron CG14082 - chr3L 19127475 intron CG14082 - chr3L_18_19125001 chr3L_19125001 KN35_1-HE 2009 chr3L 19127729 19127755 chr3L 19127818 19127844 13 89 4.5 5.0 4.8 2.2 115 chr3L 19127729 intron CG14082 - chr3L 19127786 intron CG14082 - chr3L 19127844 intron CG14082 - chr3L_13_19125001 chr3L_19125001 KN35_1-HE 2010 chr3L 19182385 19182420 chr3L 19182467 19182502 23 82 4.0 3.5 3.8 4.8 117 chr3L 19182385 intron fz2 - chr3L 19182444 intron fz2 - chr3L 19182502 intron fz2 - chr3L_23_19180001 chr3L_19180001 KN35_1-HE 2011 chr3L 19192782 19192819 chr3L 19192866 19192903 12 84 5.0 2.0 3.5 2.7 121 chr3L 19192782 intron fz2 - chr3L 19192842 intron fz2 - chr3L 19192903 intron fz2 - chr3L_12_19190001 chr3L_19190001 KN35_1-HE 2012 chr3L 19207323 19207339 chr3L 19207497 19207513 13 174 6.0 0.5 3.2 3.1 190 chr3L 19207323 intron fz2 - chr3L 19207418 intron fz2 - chr3L 19207513 intron fz2 - chr3L_13_19205001 chr3L_19205001 KN35_1-HE 2013 chr3L 19208055 19208084 chr3L 19209430 19209459 Doc 7 1375 10.0 3.0 6.5 0.9 1404 chr3L 19208055 intron fz2 - chr3L 19208757 intron fz2 - chr3L 19209459 intron fz2 - chr3L_7_19205001 chr3L_19205001 KN35_1-HE 2014 chr3L 19210116 19210130 chr3L 19210213 19210227 12 97 0.0 6.5 3.2 2.9 111 chr3L 19210116 intron fz2 - chr3L 19210172 intron fz2 - chr3L 19210227 intron fz2 - chr3L_12_19210001 chr3L_19210001 KN35_1-HE 2015 chr3L 19210132 19210140 chr3L 19210229 19210237 7 97 0.0 10.5 5.2 1.1 105 chr3L 19210132 intron fz2 - chr3L 19210184 intron fz2 - chr3L 19210237 intron fz2 - chr3L_7_19210001 chr3L_19210001 KN35_1-HE 2016 chr3L 19248865 19248900 chr3L 19249180 19249215 10 315 4.5 4.0 4.2 1.9 350 chr3L 19248865 intergenic not near genes chr3L 19249040 intergenic not near genes chr3L 19249215 intergenic not near genes chr3L_10_19245001 chr3L_19245001 KN35_1-HE 2017 chr3L 19269815 19269835 chr3L 19270020 19270040 5 205 4.5 2.0 3.2 1.2 225 chr3L 19269815 intron,exon CG14085 +,CG14088 - chr3L 19269928 intron,exon CG14085 +,CG14088 - chr3L 19270040 intron,exon CG14085 +,CG14088 - chr3L_5_19265001 chr3L_19265001 KN35_1-HE 2018 chr3L 19277043 19277069 chr3L 19277168 19277194 12 125 7.5 5.5 6.5 1.6 151 chr3L 19277043 intron CG14086 + chr3L 19277118 intron CG14086 + chr3L 19277194 intron CG14086 + chr3L_12_19275001 chr3L_19275001 KN35_1-HE 2019 chr3L 19342761 19342777 chr3L 19342853 19342869 12 92 7.5 7.5 7.5 1.4 108 chr3L 19342761 3` UTR CG32206 - chr3L 19342815 3` UTR CG32206 - chr3L 19342869 3` UTR CG32206 - chr3L_12_19340001 chr3L_19340001 KN35_1-HE 2020 chr3L 19365919 19365929 chr3L 19366017 19366027 7 98 0.0 9.5 4.8 1.2 108 chr3L 19365919 intron CG32206 - chr3L 19365973 intron CG32206 - chr3L 19366027 intron CG32206 - chr3L_7_19365001 chr3L_19365001 KN35_1-HE 2021 chr3L 19377403 19377422 chr3L 19377511 19377530 7 108 0.5 10.5 5.5 1.1 127 chr3L 19377403 intron CG32206 - chr3L 19377466 intron CG32206 - chr3L 19377530 intron CG32206 - chr3L_7_19375001 chr3L_19375001 KN35_1-HE 2022 chr3L 19423052 19423081 chr3L 19423144 19423173 15 91 7.0 10.0 8.5 1.6 121 chr3L 19423052 3` UTR CR32205 - chr3L 19423112 3` UTR CR32205 - chr3L 19423173 3` UTR CR32205 - chr3L_15_19420001 chr3L_19420001 KN35_1-HE 2023 chr3L 19426746 19426780 chr3L 19426825 19426859 22 79 6.0 3.0 4.5 4.0 113 chr3L 19426746 intergenic not near genes chr3L 19426802 intergenic not near genes chr3L 19426859 intergenic not near genes chr3L_22_19425001 chr3L_19425001 KN35_1-HE 2024 chr3L 19430406 19430435 chr3L 19430485 19430514 13 79 0.0 5.5 2.8 3.4 108 chr3L 19430406 intergenic not near genes chr3L 19430460 intergenic not near genes chr3L 19430514 intergenic not near genes chr3L_13_19430001 chr3L_19430001 KN35_1-HE 2025 chr3L 19433174 19433210 chr3L 19433255 19433291 21 81 2.5 6.5 4.5 3.8 117 chr3L 19433174 intergenic not near genes chr3L 19433232 intergenic not near genes chr3L 19433291 intergenic not near genes chr3L_21_19430001 chr3L_19430001 KN35_1-HE 2026 chr3L 19488476 19488495 chr3L 19488559 19488578 7 83 7.5 2.0 4.8 1.2 102 chr3L 19488476 intergenic pncr009:3L -,CG32212 + chr3L 19488527 intergenic pncr009:3L -,CG32212 + chr3L 19488578 intergenic pncr009:3L -,CG32212 + chr3L_7_19485001 chr3L_19485001 KN35_1-HE 2027 chr3L 19554822 19554853 chr3L 19554918 19554948 6 95 3.0 4.5 3.8 1.2 126 chr3L 19554822 intergenic CG9300 + chr3L 19554885 intergenic CG9300 + chr3L 19554948 intergenic CG9300 + chr3L_6_19550001 chr3L_19550001 KN35_1-HE 2028 chr3L 19669488 19669518 chr3L 19669579 19669606 7 89 4.5 7.5 6.0 1.0 118 chr3L 19669488 intergenic not near genes chr3L 19669547 intergenic not near genes chr3L 19669606 intergenic not near genes chr3L_7_19665001 chr3L_19665001 KN35_1-HE 2029 chr3L 19688047 19688070 chr3L 19688124 19688147 17 77 2.5 5.0 3.8 3.5 100 chr3L 19688047 intron Gbeta76C + chr3L 19688097 intron Gbeta76C + chr3L 19688147 intron Gbeta76C + chr3L_17_19685001 chr3L_19685001 KN35_1-HE 2030 chr3L 19792361 19792373 chr3L 19792457 19792469 9 96 11.5 12.0 11.8 0.7 108 chr3L 19792361 intron,intron CG42637 -,Gyc76C - chr3L 19792415 intron,intron CG42637 -,Gyc76C - chr3L 19792469 intron,intron CG42637 -,Gyc76C - chr3L_9_19790001 chr3L_19790001 KN35_1-HE 2031 chr3L 19820298 19820319 chr3L 19827848 19827869 412 10 7550 5.0 5.5 5.2 1.6 7571 chr3L 19820298 intron Deaf1 + chr3L 19824084 intron Deaf1 + chr3L 19827869 intron Deaf1 + chr3L_10_19820001 chr3L_19820001 KN35_1-HE 2032 chr3L 19848502 19848534 chr3L 19857693 19857725 roo 5 9191 4.5 4.5 4.5 0.9 9223 chr3L 19848502 intron Papss + chr3L 19853114 intron Papss + chr3L 19857725 intron Papss + chr3L_5_19850001 chr3L_19850001 KN35_1-HE 2033 chr3L 19861830 19861852 chr3L 19863619 19863641 S-element 9 1789 6.5 3.0 4.8 1.6 1811 chr3L 19861830 5` UTR CR45433 + chr3L 19862736 intergenic not near genes chr3L 19863641 intergenic not near genes chr3L_9_19860001 chr3L_19860001 KN35_1-HE 2034 chr3L 19949756 19949785 chr3L 19949835 19949864 21 79 8.0 5.0 6.5 2.8 108 chr3L 19949756 intron Ac76E + chr3L 19949810 intron Ac76E + chr3L 19949864 intron Ac76E + chr3L_21_19945001 chr3L_19945001 KN35_1-HE 2035 chr3L 19981202 19981229 chr3L 19981283 19981310 13 81 7.0 4.0 5.5 2.0 108 chr3L 19981202 intergenic CG17732 + chr3L 19981256 intergenic CG17732 + chr3L 19981310 intergenic CG17732 + chr3L_13_19980001 chr3L_19980001 KN35_1-HE 2036 chr3L 20030343 20030357 chr3L 20030424 20030438 4 81 4.5 5.0 4.8 0.7 95 chr3L 20030343 intergenic not near genes chr3L 20030390 intergenic not near genes chr3L 20030438 intergenic not near genes chr3L_4_20030001 chr3L_20030001 KN35_1-HE 2037 chr3L 20086784 20086814 chr3L 20086863 20086893 15 79 3.0 0.0 1.5 6.0 109 chr3L 20086784 intron sNPF-R - chr3L 20086838 intron sNPF-R - chr3L 20086893 intron sNPF-R - chr3L_15_20085001 chr3L_20085001 KN35_1-HE 2038 chr3L 20096085 20096094 chr3L 20096190 20096199 4 105 6.5 1.5 4.0 0.8 114 chr3L 20096085 intergenic not near genes chr3L 20096142 intergenic not near genes chr3L 20096199 intergenic not near genes chr3L_4_20095001 chr3L_20095001 KN35_1-HE 2039 chr3L 20097737 20097740 chr3L 20097855 20097858 4 118 3.0 6.5 4.8 0.7 121 chr3L 20097737 intergenic CG14186 - chr3L 20097798 intergenic CG14186 - chr3L 20097858 intergenic CG14186 - chr3L_4_20095001 chr3L_20095001 KN35_1-HE 2040 chr3L 20113656 20113691 chr3L 20122913 20122949 roo 19 9258 2.0 1.0 1.5 7.6 9293 chr3L 20113656 intergenic not near genes chr3L 20118302 intergenic not near genes chr3L 20122949 intergenic not near genes chr3L_19_20115001 chr3L_20115001 KN35_1-HE 2041 chr3L 20145556 20145588 chr3L 20145885 20145917 7 329 0.5 3.5 2.0 2.3 361 chr3L 20145556 intergenic not near genes chr3L 20145736 intergenic not near genes chr3L 20145917 intergenic not near genes chr3L_7_20145001 chr3L_20145001 KN35_1-HE 2042 chr3L 20156163 20156193 chr3L 20156286 20156316 14 123 9.0 6.0 7.5 1.6 153 chr3L 20156163 intron CG42674 - chr3L 20156240 intron CG42674 - chr3L 20156316 intron CG42674 - chr3L_14_20155001 chr3L_20155001 KN35_1-HE 2043 chr3L 20257338 20257363 chr3L 20258459 20258484 pogo 19 1121 3.5 5.0 4.2 3.7 1146 chr3L 20257338 intron rdgC + chr3L 20257911 intron rdgC + chr3L 20258484 intron rdgC + chr3L_19_20255001 chr3L_20255001 KN35_1-HE 2044 chr3L 20307447 20307483 chr3L 20307528 20307564 8 81 3.0 2.5 2.8 2.1 117 chr3L 20307447 intron CG6597 + chr3L 20307506 intron CG6597 + chr3L 20307564 intron CG6597 + chr3L_8_20305001 chr3L_20305001 KN35_1-HE 2045 chr3L 20476751 20476786 chr3L 20484351 20484386 springer 12 7600 6.0 4.0 5.0 2.0 7635 chr3L 20476751 3` UTR isoQC + chr3L 20480568 intergenic not near genes chr3L 20484386 3` UTR ZnT77C - chr3L_12_20480001 chr3L_20480001 KN35_1-HE 2046 chr3L 20491960 20491993 chr3L 20492050 20492083 21 89 3.5 5.5 4.5 3.8 123 chr3L 20491960 intron ZnT77C - chr3L 20492022 intron ZnT77C - chr3L 20492083 intron,5` UTR ZnT77C -,CG6020 + chr3L_21_20490001 chr3L_20490001 KN35_1-HE 2047 chr3L 20536305 20536338 chr3L 20536387 20536420 15 82 6.0 2.0 4.0 3.0 115 chr3L 20536305 intron Rcd2 - chr3L 20536362 intron Rcd2 - chr3L 20536420 intron Rcd2 - chr3L_15_20535001 chr3L_20535001 KN35_1-HE 2048 chr3L 20548362 20548388 chr3L 20548452 20548478 12 90 4.0 3.5 3.8 2.5 116 chr3L 20548362 intergenic not near genes chr3L 20548420 intergenic not near genes chr3L 20548478 intergenic not near genes chr3L_12_20545001 chr3L_20545001 KN35_1-HE 2049 chr3L 20590061 20590097 chr3L 20590601 20590637 412 21 540 8.5 3.5 6.0 3.0 576 chr3L 20590061 intergenic not near genes chr3L 20590349 intergenic not near genes chr3L 20590637 intergenic not near genes chr3L_21_20590001 chr3L_20590001 KN35_1-HE 2050 chr3L 20666344 20666363 chr3L 20666422 20666441 8 78 4.5 4.5 4.5 1.5 97 chr3L 20666344 intergenic not near genes chr3L 20666392 intergenic not near genes chr3L 20666441 intergenic not near genes chr3L_8_20665001 chr3L_20665001 KN35_1-HE 2051 chr3L 20723205 20723239 chr3L 20723499 20723533 15 294 0.5 5.0 2.8 3.9 328 chr3L 20723205 intergenic not near genes chr3L 20723369 intergenic not near genes chr3L 20723533 intergenic not near genes chr3L_15_20720001 chr3L_20720001 KN35_1-HE 2052 chr3L 20729000 20729017 chr3L 20729213 20729230 10 213 6.0 5.0 5.5 1.5 230 chr3L 20729000 intergenic CR43945 - chr3L 20729115 intergenic CR43945 - chr3L 20729230 intergenic CR43945 - chr3L_10_20725001 chr3L_20725001 KN35_1-HE 2053 chr3L 20739493 20739506 chr3L 20739609 20739622 5 116 4.0 5.5 4.8 0.9 129 chr3L 20739493 intron CG13252 + chr3L 20739558 intron CG13252 + chr3L 20739622 intron CG13252 + chr3L_5_20735001 chr3L_20735001 KN35_1-HE 2054 chr3L 20781390 20781422 chr3L 20781467 20781499 11 77 4.5 4.5 4.5 2.0 109 chr3L 20781390 3` UTR CG11399 - chr3L 20781444 3` UTR CG11399 - chr3L 20781499 3` UTR CG11399 - chr3L_11_20780001 chr3L_20780001 KN35_1-HE 2055 chr3L 20821299 20821309 chr3L 20824769 20824777 NOF 6 3470 2.0 6.5 4.2 1.2 3478 chr3L 20821299 intron Pka-R1 + chr3L 20823038 intron Pka-R1 + chr3L 20824777 intron Pka-R1 + chr3L_6_20820001 chr3L_20820001 KN35_1-HE 2056 chr3L 20849269 20849300 chr3L 20849349 20849380 21 80 7.5 6.0 6.8 2.7 111 chr3L 20849269 intron CG32432 - chr3L 20849324 intron CG32432 - chr3L 20849380 intron CG32432 - chr3L_21_20845001 chr3L_20845001 KN35_1-HE 2057 chr3L 20906664 20906695 chr3L 20906747 20906778 21 83 5.0 5.5 5.2 3.4 114 chr3L 20906664 intergenic CG11458 + chr3L 20906721 intergenic CG11458 + chr3L 20906778 intergenic CG11458 + chr3L_21_20905001 chr3L_20905001 KN35_1-HE 2058 chr3L 21014913 21014948 chr3L 21023395 21023430 Tirant 15 8479 3.0 5.5 4.2 2.9 8517 chr3L 21014913 intron skd - chr3L 21019172 intron skd - chr3L 21023430 intron skd - chr3L_15_21015001 chr3L_21015001 KN35_1-HE 2059 chr3L 21093784 21093814 chr3L 21093898 21093928 17 114 5.0 5.0 5.0 2.8 144 chr3L 21093784 intron ko - chr3L 21093856 intron ko - chr3L 21093928 intron ko - chr3L_17_21090001 chr3L_21090001 KN35_1-HE 2060 chr3L 21151861 21151893 chr3L 21156946 21156978 flea 19 5085 9.0 5.5 7.2 2.3 5117 chr3L 21151861 intron Ac78C - chr3L 21154420 intron Ac78C - chr3L 21156978 intron Ac78C - chr3L_19_21150001 chr3L_21150001 KN35_1-HE 2061 chr3L 21163244 21163275 chr3L 21163317 21163354 6 77 0.0 3.0 1.5 2.4 110 chr3L 21163244 intron Ac78C - chr3L 21163299 intron Ac78C - chr3L 21163354 intron Ac78C - chr3L_6_21160001 chr3L_21160001 KN35_1-HE 2062 chr3L 21294839 21294872 chr3L 21294931 21294964 13 92 4.0 2.0 3.0 3.2 125 chr3L 21294839 5` UTR Cpr78Cb + chr3L 21294902 5` UTR Cpr78Cb + chr3L 21294964 5` UTR Cpr78Cb + chr3L_13_21290001 chr3L_21290001 KN35_1-HE 2063 chr3L 21303707 21303741 chr3L 21303795 21303829 15 88 3.5 5.5 4.5 2.7 122 chr3L 21303707 intron CG11309 - chr3L 21303768 intron CG11309 - chr3L 21303829 intron CG11309 - chr3L_15_21300001 chr3L_21300001 KN35_1-HE 2064 chr3L 21306147 21306171 chr3L 21315307 21315331 roo 7 9160 8.0 2.5 5.2 1.1 9184 chr3L 21306147 3` UTR,3` UTR CG7632 +,Pc - chr3L 21310739 intron Pc - chr3L 21315331 3` UTR Pc - chr3L_7_21310001 chr3L_21310001 KN35_1-HE 2065 chr3L 21361729 21361753 chr3L 21362684 21362708 G2 6 955 3.5 3.0 3.2 1.4 979 chr3L 21361729 intergenic CG32440 + chr3L 21362218 intergenic not near genes chr3L 21362708 intergenic not near genes chr3L_6_21360001 chr3L_21360001 KN35_1-HE 2066 chr3L 21372721 21372751 chr3L 21379230 21379260 McClintock 17 6509 6.5 8.0 7.2 2.1 6539 chr3L 21372721 intergenic not near genes chr3L 21375990 intergenic not near genes chr3L 21379260 intergenic not near genes chr3L_17_21375001 chr3L_21375001 KN35_1-HE 2067 chr3L 21406992 21407027 chr3L 21407072 21407107 10 80 6.0 5.0 5.5 1.5 115 chr3L 21406992 intron rgn + chr3L 21407050 intron rgn + chr3L 21407107 intron rgn + chr3L_10_21405001 chr3L_21405001 KN35_1-HE 2068 chr3L 21414535 21414545 chr3L 21414612 21414622 5 77 8.0 6.5 7.2 0.6 87 chr3L 21414535 intron rgn + chr3L 21414578 intron rgn + chr3L 21414622 intron rgn + chr3L_5_21410001 chr3L_21410001 KN35_1-HE 2069 chr3L 21437601 21437629 chr3L 21437709 21437737 14 108 4.5 4.5 4.5 2.5 136 chr3L 21437601 3` UTR Aef1 + chr3L 21437669 3` UTR Aef1 + chr3L 21437737 3` UTR Aef1 + chr3L_14_21435001 chr3L_21435001 KN35_1-HE 2070 chr3L 21498834 21498868 chr3L 21500471 21500505 1360 18 1635 2.5 6.5 4.5 3.3 1671 chr3L 21498834 intron Glg1 - chr3L 21499670 intron Glg1 - chr3L 21500505 intron Glg1 - chr3L_18_21495001 chr3L_21495001 KN35_1-HE 2071 chr3L 21593912 21593946 chr3L 21594051 21594085 24 139 3.5 3.5 3.5 5.3 173 chr3L 21593912 intron TfAP-2 + chr3L 21593998 intron TfAP-2 + chr3L 21594085 intron TfAP-2 + chr3L_24_21590001 chr3L_21590001 KN35_1-HE 2072 chr3L 21637324 21637353 chr3L 21637412 21637441 13 88 3.0 3.0 3.0 3.2 117 chr3L 21637324 intron CG32444 + chr3L 21637382 intron CG32444 + chr3L 21637441 intron CG32444 + chr3L_13_21635001 chr3L_21635001 KN35_1-HE 2073 chr3L 21671055 21671088 chr3L 21671203 21671237 18 149 4.5 4.0 4.2 3.5 182 chr3L 21671055 intergenic not near genes chr3L 21671146 intergenic not near genes chr3L 21671237 intergenic not near genes chr3L_18_21670001 chr3L_21670001 KN35_1-HE 2074 chr3L 21736344 21736375 chr3L 21736546 21736577 13 202 0.0 2.5 1.2 5.9 233 chr3L 21736344 intergenic CR43888 + chr3L 21736460 intergenic CR43888 + chr3L 21736577 intergenic CR43888 + chr3L_13_21735001 chr3L_21735001 KN35_1-HE 2075 chr3L 21749315 21749343 chr3L 21754476 21754503 Doc 8 5160 2.5 6.5 4.5 1.5 5188 chr3L 21749315 intron Syn1 - chr3L 21751909 intron Syn1 - chr3L 21754503 intron Syn1 - chr3L_8_21750001 chr3L_21750001 KN35_1-HE 2076 chr3L 21758503 21758505 chr3L 21758899 21758901 5 396 48.0 19.5 33.8 0.1 398 chr3L 21758503 intron Syn1 - chr3L 21758702 intron Syn1 - chr3L 21758901 intron Syn1 - chr3L_5_21755001 chr3L_21755001 KN35_1-HE 2077 chr3L 21769052 21769085 chr3L 21769140 21769173 15 88 3.0 4.5 3.8 3.1 121 chr3L 21769052 intron,intron Syn1 -,CG42689 + chr3L 21769112 intron,intron Syn1 -,CG42689 + chr3L 21769173 intron,intron Syn1 -,CG42689 + chr3L_15_21765001 chr3L_21765001 KN35_1-HE 2078 chr3L 21776670 21776696 chr3L 21776758 21776784 16 88 5.0 4.5 4.8 2.8 114 chr3L 21776670 intron,intron CG42689 +,CG42552 + chr3L 21776727 intron,intron CG42689 +,CG42552 + chr3L 21776784 intron,intron CG42689 +,CG42552 + chr3L_16_21775001 chr3L_21775001 KN35_1-HE 2079 chr3L 21798765 21798796 chr3L 21798855 21798886 7 90 3.0 3.0 3.0 1.8 121 chr3L 21798765 intergenic not near genes chr3L 21798826 intergenic not near genes chr3L 21798886 intergenic not near genes chr3L_7_21795001 chr3L_21795001 KN35_1-HE 2080 chr3L 21799846 21799870 chr3L 21799935 21799954 11 89 6.0 10.0 8.0 1.2 108 chr3L 21799846 intergenic not near genes chr3L 21799900 intergenic not near genes chr3L 21799954 intergenic not near genes chr3L_11_21795001 chr3L_21795001 KN35_1-HE 2081 chr3L 21975689 21975712 chr3L 21975924 21975947 7 235 1.5 5.0 3.2 1.7 258 chr3L 21975689 intron CG7470 + chr3L 21975818 intron CG7470 + chr3L 21975947 intron CG7470 + chr3L_7_21975001 chr3L_21975001 KN35_1-HE 2082 chr3L 21994436 21994471 chr3L 21994518 21994553 18 82 2.0 4.5 3.2 4.3 117 chr3L 21994436 intergenic not near genes chr3L 21994494 intergenic not near genes chr3L 21994553 intergenic not near genes chr3L_18_21990001 chr3L_21990001 KN35_1-HE 2083 chr3L 22023219 22023244 chr3L 22023311 22023337 9 92 6.5 4.0 5.2 1.5 118 chr3L 22023219 intergenic not near genes chr3L 22023278 intergenic not near genes chr3L 22023337 intergenic not near genes chr3L_9_22020001 chr3L_22020001 KN35_1-HE 2084 chr3L 22038401 22038436 chr3L 22038591 22038626 18 189 5.0 2.0 3.5 4.0 225 chr3L 22038401 intron Oct-TyrR + chr3L 22038514 intron Oct-TyrR + chr3L 22038626 intron Oct-TyrR + chr3L_18_22035001 chr3L_22035001 KN35_1-HE 2085 chr3L 22045994 22046012 chr3L 22046286 22046304 14 292 6.0 9.0 7.5 1.6 310 chr3L 22045994 intron Oct-TyrR + chr3L 22046149 intron Oct-TyrR + chr3L 22046304 intron Oct-TyrR + chr3L_14_22045001 chr3L_22045001 KN35_1-HE 2086 chr3L 22047228 22047255 chr3L 22047509 22047536 12 281 4.5 2.5 3.5 2.7 308 chr3L 22047228 intron Oct-TyrR + chr3L 22047382 intron Oct-TyrR + chr3L 22047536 intron Oct-TyrR + chr3L_12_22045001 chr3L_22045001 KN35_1-HE 2087 chr3L 22097798 22097832 chr3L 22097942 22097977 21 144 3.5 6.5 5.0 3.5 179 chr3L 22097798 intergenic not near genes chr3L 22097888 intergenic not near genes chr3L 22097977 intergenic not near genes chr3L_21_22095001 chr3L_22095001 KN35_1-HE 2088 chr3L 22099674 22099708 chr3L 22105861 22105895 3S18 22 6187 9.0 6.0 7.5 2.6 6221 chr3L 22099674 intergenic not near genes chr3L 22102784 intergenic not near genes chr3L 22105895 intergenic not near genes chr3L_22_22100001 chr3L_22100001 KN35_1-HE 2089 chr3L 22105940 22105975 chr3L 22106034 22106070 23 95 4.5 3.5 4.0 4.6 130 chr3L 22105940 intergenic not near genes chr3L 22106005 intergenic not near genes chr3L 22106070 intergenic not near genes chr3L_23_22105001 chr3L_22105001 KN35_1-HE 2090 chr3L 22114778 22114816 chr3L 22114857 22114895 17 79 3.5 6.0 4.8 2.9 117 chr3L 22114778 intergenic not near genes chr3L 22114836 intergenic not near genes chr3L 22114895 intergenic not near genes chr3L_17_22110001 chr3L_22110001 KN35_1-HE 2091 chr3L 22120054 22120086 chr3L 22120167 22120199 15 113 4.0 4.5 4.2 2.9 145 chr3L 22120054 intergenic not near genes chr3L 22120126 intergenic not near genes chr3L 22120199 intergenic not near genes chr3L_15_22120001 chr3L_22120001 KN35_1-HE 2092 chr3L 22137521 22137554 chr3L 22137599 22137632 18 78 2.5 6.5 4.5 3.3 111 chr3L 22137521 intron olf413 + chr3L 22137576 intron olf413 + chr3L 22137632 intron olf413 + chr3L_18_22135001 chr3L_22135001 KN35_1-HE 2093 chr3L 22224562 22224598 chr3L 22224792 22224828 31 230 6.0 8.5 7.2 3.8 266 chr3L 22224562 intron olf413 + chr3L 22224695 intron olf413 + chr3L 22224828 intron olf413 + chr3L_31_22220001 chr3L_22220001 KN35_1-HE 2094 chr3L 22231577 22231595 chr3L 22231668 22231686 13 91 9.0 13.0 11.0 1.1 109 chr3L 22231577 intron olf413 + chr3L 22231632 intron olf413 + chr3L 22231686 intron olf413 + chr3L_13_22230001 chr3L_22230001 KN35_1-HE 2095 chr3L 22305070 22305102 chr3L 22305148 22305179 19 77 9.5 5.5 7.5 2.2 109 chr3L 22305070 intron Ten-m - chr3L 22305124 intron Ten-m - chr3L 22305179 intron Ten-m - chr3L_19_22305001 chr3L_22305001 KN35_1-HE 2096 chr3L 22357795 22357834 chr3L 22357875 22357914 19 79 5.0 4.0 4.5 3.5 119 chr3L 22357795 intron Ten-m - chr3L 22357854 intron Ten-m - chr3L 22357914 intron Ten-m - chr3L_19_22355001 chr3L_22355001 KN35_1-HE 2097 chr3L 22359325 22359351 chr3L 22359439 22359465 17 114 7.5 3.5 5.5 2.6 140 chr3L 22359325 intron Ten-m - chr3L 22359395 intron Ten-m - chr3L 22359465 intron Ten-m - chr3L_17_22355001 chr3L_22355001 KN35_1-HE 2098 chr3L 22397109 22397140 chr3L 22397197 22397228 18 87 3.5 5.0 4.2 3.5 119 chr3L 22397109 intron Ten-m - chr3L 22397168 intron Ten-m - chr3L 22397228 intron Ten-m - chr3L_18_22395001 chr3L_22395001 KN35_1-HE 2099 chr3L 22413870 22413899 chr3L 22413955 22413984 13 85 3.5 4.0 3.8 2.7 114 chr3L 22413870 intergenic not near genes chr3L 22413927 intergenic not near genes chr3L 22413984 intergenic not near genes chr3L_13_22410001 chr3L_22410001 KN35_1-HE 2100 chr3L 22435578 22435611 chr3L 22435655 22435687 17 77 7.5 7.0 7.2 2.1 109 chr3L 22435578 intergenic not near genes chr3L 22435632 intergenic not near genes chr3L 22435687 intergenic not near genes chr3L_17_22435001 chr3L_22435001 KN35_1-HE 2101 chr3L 22445105 22445135 chr3L 22445220 22445247 12 115 2.5 4.5 3.5 2.7 142 chr3L 22445105 intergenic not near genes chr3L 22445176 intergenic not near genes chr3L 22445247 intergenic not near genes chr3L_12_22445001 chr3L_22445001 KN35_1-HE 2102 chr3L 22447572 22447594 chr3L 22447661 22447683 9 89 6.0 1.5 3.8 1.9 111 chr3L 22447572 intergenic not near genes chr3L 22447628 intergenic not near genes chr3L 22447683 intergenic not near genes chr3L_9_22445001 chr3L_22445001 KN35_1-HE 2103 chr3L 22464594 22464618 chr3L 22464671 22464695 10 77 4.0 4.0 4.0 2.0 101 chr3L 22464594 intergenic not near genes chr3L 22464644 intergenic not near genes chr3L 22464695 intergenic not near genes chr3L_10_22460001 chr3L_22460001 KN35_1-HE 2104 chr3L 22522696 22522729 chr3L 22522774 22522807 30 78 7.5 6.0 6.8 3.8 111 chr3L 22522696 intergenic not near genes chr3L 22522752 intergenic not near genes chr3L 22522807 intergenic not near genes chr3L_30_22520001 chr3L_22520001 KN35_1-HE 2105 chr3L 22528691 22528725 chr3L 22528796 22528830 17 103 6.5 6.5 6.5 2.3 139 chr3L 22528691 intergenic not near genes chr3L 22528760 intergenic not near genes chr3L 22528830 intergenic not near genes chr3L_17_22525001 chr3L_22525001 KN35_1-HE 2106 chr3L 22537453 22537474 chr3L 22537554 22537575 10 101 3.5 0.5 2.0 3.3 122 chr3L 22537453 intergenic not near genes chr3L 22537514 intergenic not near genes chr3L 22537575 intergenic not near genes chr3L_10_22535001 chr3L_22535001 KN35_1-HE 2107 chr3L 22539695 22539719 chr3L 22539978 22540002 7 283 2.0 7.0 4.5 1.3 307 chr3L 22539695 intergenic not near genes chr3L 22539848 intergenic not near genes chr3L 22540002 intergenic not near genes chr3L_7_22535001 chr3L_22535001 KN35_1-HE 2108 chr3L 22555767 22555798 chr3L 22563238 22563269 blood 20 7471 5.5 0.5 3.0 5.0 7502 chr3L 22555767 intergenic not near genes chr3L 22559518 intergenic not near genes chr3L 22563269 intergenic not near genes chr3L_20_22555001 chr3L_22555001 KN35_1-HE 2109 chr3L 22577618 22577641 chr3L 22582407 22582430 Doc 4 4789 5.0 7.5 6.2 0.6 4812 chr3L 22577618 intergenic not near genes chr3L 22580024 intergenic not near genes chr3L 22582430 3` UTR CG14459 - chr3L_4_22580001 chr3L_22580001 KN35_1-HE 2110 chr3L 22617187 22617222 chr3L 22624640 22624675 blood 13 7453 6.0 4.0 5.0 2.2 7488 chr3L 22617187 intron CG14459 - chr3L 22620931 intron CG14459 - chr3L 22624675 intron CG14459 - chr3L_13_22620001 chr3L_22620001 KN35_1-HE 2111 chr3L 22690683 22690706 chr3L 22690989 22691012 5 306 3.0 1.5 2.2 1.6 329 chr3L 22690683 intergenic not near genes chr3L 22690848 intergenic not near genes chr3L 22691012 intergenic not near genes chr3L_5_22690001 chr3L_22690001 KN35_1-HE 2112 chr3L 22738098 22738130 chr3L 22738187 22738219 5 89 2.0 2.5 2.2 1.6 121 chr3L 22738098 intron CG11241 - chr3L 22738158 intron CG11241 - chr3L 22738219 intron CG11241 - chr3L_5_22735001 chr3L_22735001 KN35_1-HE 2113 chr3L 22761388 22761416 chr3L 22766823 22766851 Ivk 10 5435 7.0 8.0 7.5 1.2 5463 chr3L 22761388 intron SPoCk + chr3L 22764120 intron SPoCk + chr3L 22766851 intron SPoCk + chr3L_10_22760001 chr3L_22760001 KN35_1-HE 2114 chr3L 22770523 22770555 chr3L 22770943 22770975 15 420 5.0 3.0 4.0 3.0 452 chr3L 22770523 intron SPoCk + chr3L 22770749 intron SPoCk + chr3L 22770975 intron SPoCk + chr3L_15_22770001 chr3L_22770001 KN35_1-HE 2115 chr3L 22853911 22853947 chr3L 22854019 22854055 14 108 0.5 3.0 1.8 5.0 144 chr3L 22853911 5` UTR CR43426 + chr3L 22853983 5` UTR CR43426 + chr3L 22854055 5` UTR CR43426 + chr3L_14_22850001 chr3L_22850001 KN35_1-HE 2116 chr3L 22865982 22866013 chr3L 22867116 22867147 Doc 11 1134 3.5 2.5 3.0 2.8 1165 chr3L 22865982 intron CG33170 + chr3L 22866564 intron CG33170 + chr3L 22867147 intron CG33170 + chr3L_11_22865001 chr3L_22865001 KN35_1-HE 2117 chr3L 22949199 22949220 chr3L 22949288 22949309 8 89 5.0 3.0 4.0 1.6 110 chr3L 22949199 intron Mes2 + chr3L 22949254 intron Mes2 + chr3L 22949309 intron Mes2 + chr3L_8_22945001 chr3L_22945001 KN35_1-HE 2118 chr3L 22963223 22963236 chr3L 22963326 22963339 11 103 4.5 13.0 8.8 1.1 116 chr3L 22963223 intergenic not near genes chr3L 22963281 intergenic not near genes chr3L 22963339 intergenic not near genes chr3L_11_22960001 chr3L_22960001 KN35_1-HE 2119 chr3L 22989859 22989890 chr3L 22996834 22996865 297 9 6975 3.5 3.0 3.2 2.1 7006 chr3L 22989859 intergenic not near genes chr3L 22993362 intergenic not near genes chr3L 22996865 intergenic not near genes chr3L_9_22990001 chr3L_22990001 KN35_1-HE 2120 chr3L 23004901 23004941 chr3L 23005228 23005268 20 327 4.0 3.0 3.5 4.4 367 chr3L 23004901 intron nrm + chr3L 23005084 intron nrm + chr3L 23005268 intron nrm + chr3L_20_23005001 chr3L_23005001 KN35_1-HE 2121 chr3L 23042227 23042257 chr3L 23048981 23049011 gypsy6 12 6754 3.0 5.0 4.0 2.4 6784 chr3L 23042227 intergenic not near genes chr3L 23045619 intergenic not near genes chr3L 23049011 intergenic not near genes chr3L_12_23045001 chr3L_23045001 KN35_1-HE 2122 chr3L 23227779 23227800 chr3L 23228022 23228043 6 244 16.0 14.5 15.2 0.4 264 chr3L 23227779 intron nAChRalpha4 + chr3L 23227911 intron nAChRalpha4 + chr3L 23228043 intron nAChRalpha4 + chr3L_6_23225001 chr3L_23225001 KN35_1-HE 2123 chr3L 23253330 23253367 chr3L 23253416 23253453 22 86 4.5 4.0 4.2 4.2 123 chr3L 23253330 intron nAChRalpha4 + chr3L 23253392 intron nAChRalpha4 + chr3L 23253453 intron nAChRalpha4 + chr3L_22_23250001 chr3L_23250001 KN35_1-HE 2124 chr3L 23280148 23280179 chr3L 23280257 23280288 16 108 5.0 7.5 6.2 2.2 140 chr3L 23280148 intron nAChRalpha4 + chr3L 23280218 intron nAChRalpha4 + chr3L 23280288 intron nAChRalpha4 + chr3L_16_23280001 chr3L_23280001 KN35_1-HE 2125 chr3L 23353228 23353243 chr3L 23353344 23353359 9 116 3.5 5.0 4.2 1.7 131 chr3L 23353228 intergenic not near genes chr3L 23353294 intergenic not near genes chr3L 23353359 intergenic not near genes chr3L_9_23350001 chr3L_23350001 KN35_1-HE 2126 chr3L 23455561 23455593 chr3L 23455713 23455745 15 150 6.0 5.5 5.8 2.2 184 chr3L 23455561 intergenic not near genes chr3L 23455653 intergenic not near genes chr3L 23455745 intergenic not near genes chr3L_15_23455001 chr3L_23455001 KN35_1-HE 2127 chr3L 23532575 23532605 chr3L 23532666 23532696 13 91 6.0 3.5 4.8 2.2 121 chr3L 23532575 intergenic not near genes chr3L 23532636 intergenic not near genes chr3L 23532696 intergenic not near genes chr3L_13_23530001 chr3L_23530001 KN35_1-HE 2128 chr3L 23536252 23536261 chr3L 23797105 23797114 gypsy8 5 260853 21.5 13.0 17.2 0.3 260862 chr3L 23536252 intergenic not near genes chr3L 23666683 intron AGO3 + chr3L 23797114 intergenic not near genes chr3L_5_23665001 chr3L_23665001 KN35_1-HE 2129 chr3L 23590212 23590240 chr3L 23590312 23590340 10 100 23.5 23.0 23.2 0.4 128 chr3L 23590212 intron AGO3 + chr3L 23590276 intron AGO3 + chr3L 23590340 intron AGO3 + chr3L_10_23590001 chr3L_23590001 KN35_1-HE 2130 chr3L 23770589 23770619 chr3L 23770670 23770700 14 81 1.5 4.5 3.0 3.5 111 chr3L 23770589 intergenic not near genes chr3L 23770644 intergenic not near genes chr3L 23770700 intergenic not near genes chr3L_14_23770001 chr3L_23770001 KN35_1-HE 2131 chr3L 23798111 23798144 chr3L 23798202 23798235 9 91 1.0 1.5 1.2 4.1 124 chr3L 23798111 intergenic not near genes chr3L 23798173 intergenic not near genes chr3L 23798235 intergenic not near genes chr3L_9_23795001 chr3L_23795001 KN35_1-HE 2132 chr3L 23868801 23868812 chr3L 23869151 23869162 7 350 32.0 40.5 36.2 0.2 361 chr3L 23868801 intron CG40470 - chr3L 23868982 intron CG40470 - chr3L 23869162 intron CG40470 - chr3L_7_23865001 chr3L_23865001 KN35_1-HE 2133 chr3L 23933544 23933556 chr3L 23933642 23933643 5 96 4.5 5.0 4.8 0.9 99 chr3L 23933544 intron CG40470 - chr3L 23933594 intron CG40470 - chr3L 23933643 intron CG40470 - chr3L_5_23930001 chr3L_23930001 KN35_1-HE 2134 chr3L 23941850 23941886 chr3L 23941987 23942023 12 135 2.5 5.0 3.8 2.5 173 chr3L 23941850 intron CG40470 - chr3L 23941936 intron CG40470 - chr3L 23942023 intron CG40470 - chr3L_12_23940001 chr3L_23940001 KN35_1-HE 2135 chr3L 24009667 24009699 chr3L 24009850 24009882 12 183 4.5 2.5 3.5 2.7 215 chr3L 24009667 intergenic CR40053 - chr3L 24009774 intergenic CR40053 - chr3L 24009882 intergenic CR40053 - chr3L_12_24005001 chr3L_24005001 KN35_1-HE 2136 chr3L 24012405 24012433 chr3L 24020747 24020775 roo 10 8342 2.0 1.5 1.8 3.6 8370 chr3L 24012405 intergenic not near genes chr3L 24016590 intergenic not near genes chr3L 24020775 intergenic not near genes chr3L_10_24015001 chr3L_24015001 KN35_1-HE 2137 chr3L 24021275 24021304 chr3L 24022433 24022461 1360 5 1158 2.0 2.5 2.2 1.6 1186 chr3L 24021275 intergenic not near genes chr3L 24021868 intergenic not near genes chr3L 24022461 intergenic not near genes chr3L_5_24020001 chr3L_24020001 KN35_1-HE 2138 chr3L 24152791 24152807 chr3L 24153195 24153211 6 404 6.0 8.0 7.0 0.8 420 chr3L 24152791 intron Snap25 + chr3L 24153001 intron Snap25 + chr3L 24153211 intron Snap25 + chr3L_6_24150001 chr3L_24150001 KN35_1-HE 2139 chr3L 24168789 24168819 chr3L 24176118 24176148 ZAM 12 7326 3.0 5.5 4.2 2.3 7359 chr3L 24168789 intron Snap25 + chr3L 24172468 intron Snap25 + chr3L 24176148 intron Snap25 + chr3L_12_24170001 chr3L_24170001 KN35_1-HE 2140 chr3L 24565173 24565198 chr3L 24565441 24565466 12 268 14.5 6.0 10.2 1.1 293 chr3L 24565173 intergenic not near genes chr3L 24565320 intergenic not near genes chr3L 24565466 intergenic not near genes chr3L_12_24565001 chr3L_24565001 KN35_1-HE 2141 chr3L 24791894 24791925 chr3L 24796674 24796705 Doc 14 4780 3.5 6.5 5.0 2.3 4811 chr3L 24791894 intergenic not near genes chr3L 24794300 intergenic not near genes chr3L 24796705 intergenic not near genes chr3L_14_24790001 chr3L_24790001 KN35_1-HE 2142 chr3L 25331634 25331652 chr3L 25331726 25331742 15 91 8.0 4.5 6.2 2.1 108 chr3L 25331634 intergenic not near genes chr3L 25331688 intergenic not near genes chr3L 25331742 intergenic not near genes chr3L_15_25330001 chr3L_25330001 KN35_1-HE 2143 chr3L 25464019 25464099 chr3L 25464107 25464198 20 93 5.5 3.0 4.2 3.8 179 chr3L 25464019 intergenic not near genes chr3L 25464108 intergenic not near genes chr3L 25464198 intergenic not near genes chr3L_20_25460001 chr3L_25460001 KN35_1-HE 2144 chr3L 25512788 25512807 chr3L 25512867 25512886 22 79 10.5 15.5 13.0 1.6 98 chr3L 25512788 intron CG41343 - chr3L 25512837 intron CG41343 - chr3L 25512886 intron CG41343 - chr3L_22_25510001 chr3L_25510001 KN35_1-HE 2145 chr3L 25513576 25513609 chr3L 25513656 25513689 24 80 7.0 10.5 8.8 2.4 113 chr3L 25513576 intron CG41343 - chr3L 25513632 intron CG41343 - chr3L 25513689 intron CG41343 - chr3L_24_25510001 chr3L_25510001 KN35_1-HE 2146 chr3L 25627819 25627829 chr3L 25627906 25627916 6 87 8.0 8.0 8.0 0.7 97 chr3L 25627819 intron CG41343 - chr3L 25627868 intron CG41343 - chr3L 25627916 intron CG41343 - chr3L_6_25625001 chr3L_25625001 KN35_1-HE 2147 chr3L 25628497 25628529 chr3L 25633269 25633301 F-element 11 4772 0.5 3.5 2.0 3.7 4804 chr3L 25628497 intron CG41343 - chr3L 25630899 intron CG41343 - chr3L 25633301 intron CG41343 - chr3L_11_25630001 chr3L_25630001 KN35_1-HE 2148 chr3L 25842480 25842498 chr3L 25842560 25842585 14 86 4.0 5.5 4.8 2.4 105 chr3L 25842480 intron CG40178 - chr3L 25842532 intron CG40178 - chr3L 25842585 intron CG40178 - chr3L_14_25840001 chr3L_25840001 KN35_1-HE 2149 chr3L 23282481 23282485 chr3L 25911586 25911589 4 2629104 20.0 22.5 21.2 0.2 2629108 chr3L 23282481 intron nAChRalpha4 + chr3L 24597035 intergenic not near genes chr3L 25911589 intron CG40178 - chr3L_4_24595001 chr3L_24595001 KN35_1-HE 2150 chr3L 26009429 26009453 chr3L 26009521 26009545 9 90 4.5 5.0 4.8 1.6 116 chr3L 26009429 intron CG40178 - chr3L 26009487 intron CG40178 - chr3L 26009545 intron CG40178 - chr3L_9_26005001 chr3L_26005001 KN35_1-HE 2151 chr3L 26694924 26694959 chr3L 26695005 26695040 14 80 5.0 2.0 3.5 3.1 116 chr3L 26694924 intergenic not near genes chr3L 26694982 intergenic not near genes chr3L 26695040 intergenic not near genes chr3L_14_26690001 chr3L_26690001 KN35_1-HE 2152 chr3L 27115778 27115798 chr3L 27115898 27115918 5 120 4.0 2.0 3.0 1.2 140 chr3L 27115778 intergenic not near genes chr3L 27115848 intergenic not near genes chr3L 27115918 intergenic not near genes chr3L_5_27115001 chr3L_27115001 KN35_1-HE 2153 chr3L 27368877 27368910 chr3L 27369423 27369456 20 546 3.5 3.0 3.2 4.8 579 chr3L 27368877 intron Dbp80 + chr3L 27369166 intron Dbp80 + chr3L 27369456 intron Dbp80 + chr3L_20_27365001 chr3L_27365001 KN35_1-HE 2154 chr3L 27390694 27390705 chr3L 27390774 27390785 6 79 39.0 45.5 42.2 0.1 91 chr3L 27390694 intron Dbp80 + chr3L 27390740 intron Dbp80 + chr3L 27390785 intron Dbp80 + chr3L_6_27390001 chr3L_27390001 KN35_1-HE 2155 chr3L 27980696 27980731 chr3L 27985495 27985530 Doc 6 4799 1.0 1.5 1.2 2.7 4834 chr3L 27980696 intron CG17514 - chr3L 27983113 intron CG17514 - chr3L 27985530 intron CG17514 - chr3L_6_27980001 chr3L_27980001 KN35_1-HE 2156 chr3R 758865 758896 chr3R 758971 759002 6 106 3.5 1.5 2.5 1.7 137 chr3R 758865 intergenic not near genes chr3R 758934 intergenic not near genes chr3R 759002 intergenic not near genes chr3R_6_755001 chr3R_755001 KN35_1-HE 2157 chr3R 1443430 1443450 chr3R 1443507 1443527 9 77 3.5 1.5 2.5 2.6 97 chr3R 1443430 intron CG40155 + chr3R 1443478 intron CG40155 + chr3R 1443527 intron CG40155 + chr3R_9_1440001 chr3R_1440001 KN35_1-HE 2158 chr3R 1521166 1521180 chr3R 1521255 1521269 7 89 10.0 9.5 9.8 0.6 103 chr3R 1521166 intergenic not near genes chr3R 1521218 intergenic not near genes chr3R 1521269 intergenic not near genes chr3R_7_1520001 chr3R_1520001 KN35_1-HE 2159 chr3R 2534142 2534163 chr3R 2541711 2541731 8 7570 38.0 25.5 31.8 0.2 7589 chr3R 2534142 intergenic not near genes chr3R 2537936 intergenic not near genes chr3R 2541731 intergenic not near genes chr3R_8_2535001 chr3R_2535001 KN35_1-HE 2160 chr3R 2555883 2555906 chr3R 2556053 2556076 5 170 4.0 6.5 5.2 0.8 193 chr3R 2555883 intron CG41056 - chr3R 2555980 intron CG41056 - chr3R 2556076 intron CG41056 - chr3R_5_2555001 chr3R_2555001 KN35_1-HE 2161 chr3R 2559839 2559856 chr3R 2560127 2560144 7 288 4.5 2.0 3.2 1.7 305 chr3R 2559839 intron CG41056 - chr3R 2559992 intron CG41056 - chr3R 2560144 intron CG41056 - chr3R_7_2555001 chr3R_2555001 KN35_1-HE 2162 chr3R 2682419 2682449 chr3R 2685498 2685528 S-element 4 3079 9.5 5.0 7.2 0.5 3109 chr3R 2682419 intron CG41056 - chr3R 2683974 intron CG41056 - chr3R 2685528 intron CG41056 - chr3R_4_2680001 chr3R_2680001 KN35_1-HE 2163 chr3R 3178701 3178712 chr3R 3595186 3595197 7 416485 7.0 2.5 4.8 1.2 416496 chr3R 3178701 intron CG42617 - chr3R 3386949 intergenic not near genes chr3R 3595197 intergenic not near genes chr3R_7_3385001 chr3R_3385001 KN35_1-HE 2164 chr3R 3524118 3524147 chr3R 3524202 3524231 11 84 5.0 5.5 5.2 1.8 113 chr3R 3524118 intron Parp - chr3R 3524174 intron Parp - chr3R 3524231 intron Parp - chr3R_11_3520001 chr3R_3520001 KN35_1-HE 2165 chr3R 3880275 3880300 chr3R 3880364 3880389 13 88 6.5 5.5 6.0 1.9 114 chr3R 3880275 intergenic not near genes chr3R 3880332 intergenic not near genes chr3R 3880389 intergenic not near genes chr3R_13_3880001 chr3R_3880001 KN35_1-HE 2166 chr3R 4063808 4063828 chr3R 4069089 4069109 10 5281 9.5 24.0 16.8 0.6 5301 chr3R 4063808 intergenic not near genes chr3R 4066458 intergenic not near genes chr3R 4069109 intergenic not near genes chr3R_10_4065001 chr3R_4065001 KN35_1-HE 2167 chr3R 4105037 4105065 chr3R 4110242 4110270 copia 6 5205 2.0 3.5 2.8 1.6 5233 chr3R 4105037 intergenic not near genes chr3R 4107654 intergenic not near genes chr3R 4110270 intergenic not near genes chr3R_6_4105001 chr3R_4105001 KN35_1-HE 2168 chr3R 4129733 4129761 chr3R 4130279 4130307 14 546 3.0 4.0 3.5 3.1 574 chr3R 4129733 intron Gfat1 + chr3R 4130020 intron Gfat1 + chr3R 4130307 intron Gfat1 + chr3R_14_4130001 chr3R_4130001 KN35_1-HE 2169 chr3R 4163783 4163809 chr3R 4163929 4163955 10 146 5.0 4.5 4.8 1.7 172 chr3R 4163783 intergenic not near genes chr3R 4163869 intergenic not near genes chr3R 4163955 intergenic not near genes chr3R_10_4160001 chr3R_4160001 KN35_1-HE 2170 chr3R 4206070 4206102 chr3R 4211646 4211678 mdg3 10 5576 6.0 1.0 3.5 2.2 5608 chr3R 4206070 intron CG14636 - chr3R 4208874 intron CG14636 - chr3R 4211678 intron CG14636 - chr3R_10_4205001 chr3R_4205001 KN35_1-HE 2171 chr3R 4355780 4355791 chr3R 4355886 4355897 4 106 5.5 4.5 5.0 0.7 117 chr3R 4355780 intergenic not near genes chr3R 4355838 intergenic not near genes chr3R 4355897 intergenic not near genes chr3R_4_4355001 chr3R_4355001 KN35_1-HE 2172 chr3R 4366760 4366791 chr3R 4375144 4375175 roo 16 8384 6.5 8.5 7.5 1.9 8415 chr3R 4366760 3` UTR CG1090 + chr3R 4370968 intergenic not near genes chr3R 4375175 5` UTR CR44922 + chr3R_16_4370001 chr3R_4370001 KN35_1-HE 2173 chr3R 4404229 4404259 chr3R 4404421 4404451 10 192 3.0 1.0 2.0 3.3 222 chr3R 4404229 intron lost + chr3R 4404340 intron lost + chr3R 4404451 intron lost + chr3R_10_4400001 chr3R_4400001 KN35_1-HE 2174 chr3R 4408408 4408440 chr3R 4412713 4412745 Juan 12 4303 7.0 7.5 7.2 1.5 4337 chr3R 4408408 intron CG32944 - chr3R 4410576 intron CG32944 - chr3R 4412745 intron CG32944 - chr3R_12_4410001 chr3R_4410001 KN35_1-HE 2175 chr3R 4477940 4477963 chr3R 4478018 4478041 15 78 36.0 36.5 36.2 0.4 101 chr3R 4477940 intron CG31523 - chr3R 4477990 intron CG31523 - chr3R 4478041 intron CG31523 - chr3R_15_4475001 chr3R_4475001 KN35_1-HE 2176 chr3R 4538903 4538912 chr3R 4540164 4540173 1360 12 1261 5.0 20.0 12.5 0.9 1270 chr3R 4538903 intron CG34357 - chr3R 4539538 intron CG34357 - chr3R 4540173 intron CG34357 - chr3R_12_4535001 chr3R_4535001 KN35_1-HE 2177 chr3R 4540611 4540638 chr3R 4540802 4540835 20 194 3.0 12.5 7.8 2.3 224 chr3R 4540611 intron CG34357 - chr3R 4540723 intron CG34357 - chr3R 4540835 intron CG34357 - chr3R_20_4540001 chr3R_4540001 KN35_1-HE 2178 chr3R 4609545 4609582 chr3R 4610710 4610747 1360 20 1165 7.5 5.5 6.5 2.7 1202 chr3R 4609545 intergenic not near genes chr3R 4610146 intergenic not near genes chr3R 4610747 intergenic not near genes chr3R_20_4610001 chr3R_4610001 KN35_1-HE 2179 chr3R 4683178 4683209 chr3R 4684938 4684969 S-element 16 1760 8.5 10.5 9.5 1.5 1791 chr3R 4683178 intron CG43427 + chr3R 4684074 intron CG43427 + chr3R 4684969 intron CG43427 + chr3R_16_4680001 chr3R_4680001 KN35_1-HE 2180 chr3R 4687689 4687723 chr3R 4687771 4687805 36 82 8.0 8.0 8.0 4.0 116 chr3R 4687689 intron CG43427 + chr3R 4687747 intron CG43427 + chr3R 4687805 intron CG43427 + chr3R_36_4685001 chr3R_4685001 KN35_1-HE 2181 chr3R 4689126 4689143 chr3R 4689317 4689333 12 191 12.5 9.5 11.0 1.0 207 chr3R 4689126 intron CG43427 + chr3R 4689230 intron CG43427 + chr3R 4689333 intron CG43427 + chr3R_12_4685001 chr3R_4685001 KN35_1-HE 2182 chr3R 4689145 4689160 chr3R 4689336 4689351 11 191 6.0 15.5 10.8 0.9 206 chr3R 4689145 intron CG43427 + chr3R 4689248 intron CG43427 + chr3R 4689351 intron CG43427 + chr3R_11_4685001 chr3R_4685001 KN35_1-HE 2183 chr3R 4728954 4728980 chr3R 4729036 4729062 19 82 8.0 5.0 6.5 2.5 108 chr3R 4728954 intron Nep2 - chr3R 4729008 intron Nep2 - chr3R 4729062 intron Nep2 - chr3R_19_4725001 chr3R_4725001 KN35_1-HE 2184 chr3R 4753239 4753264 chr3R 4757543 4757568 F-element 11 4304 8.5 6.0 7.2 1.3 4329 chr3R 4753239 intron,intron atms +,CG44098 - chr3R 4755404 intron,intron atms +,CG44098 - chr3R 4757568 intron,exon atms +,CG44098 - chr3R_11_4755001 chr3R_4755001 KN35_1-HE 2185 chr3R 4759719 4759751 chr3R 4761217 4761240 hopper2 16 1497 5.0 8.5 6.8 2.1 1521 chr3R 4759719 intron,intron atms +,CG44098 - chr3R 4760480 intron,intron atms +,CG44098 - chr3R 4761240 intron,intron atms +,CG44098 - chr3R_16_4760001 chr3R_4760001 KN35_1-HE 2186 chr3R 4769159 4769189 chr3R 4769238 4769268 14 79 2.0 4.5 3.2 3.3 109 chr3R 4769159 intron,intron atms +,CG44098 - chr3R 4769214 intron,intron atms +,CG44098 - chr3R 4769268 intron,intron atms +,CG44098 - chr3R_14_4765001 chr3R_4765001 KN35_1-HE 2187 chr3R 4861565 4861596 chr3R 4861647 4861678 9 82 4.0 9.0 6.5 1.2 113 chr3R 4861565 intron opa + chr3R 4861622 intron opa + chr3R 4861678 intron opa + chr3R_9_4860001 chr3R_4860001 KN35_1-HE 2188 chr3R 4887476 4887512 chr3R 4894854 4894887 rover 6 7378 3.5 5.0 4.2 1.2 7411 chr3R 4887476 intergenic not near genes chr3R 4891182 intergenic not near genes chr3R 4894887 intergenic not near genes chr3R_6_4890001 chr3R_4890001 KN35_1-HE 2189 chr3R 4922341 4922363 chr3R 4922421 4922443 10 80 6.0 5.0 5.5 1.5 102 chr3R 4922341 intron Cdep + chr3R 4922392 intron Cdep + chr3R 4922443 intron Cdep + chr3R_10_4920001 chr3R_4920001 KN35_1-HE 2190 chr3R 4943610 4943618 chr3R 4943716 4943724 6 106 11.5 5.0 8.2 0.7 114 chr3R 4943610 intron Cdep + chr3R 4943667 intron Cdep + chr3R 4943724 intron Cdep + chr3R_6_4940001 chr3R_4940001 KN35_1-HE 2191 chr3R 4963424 4963460 chr3R 4963545 4963582 12 121 3.0 4.5 3.8 2.5 158 chr3R 4963424 intergenic not near genes chr3R 4963503 intergenic not near genes chr3R 4963582 intergenic not near genes chr3R_12_4960001 chr3R_4960001 KN35_1-HE 2192 chr3R 4966017 4966035 chr3R 4966110 4966128 9 93 4.5 3.5 4.0 1.8 111 chr3R 4966017 intron CG1124 + chr3R 4966072 intron CG1124 + chr3R 4966128 intron CG1124 + chr3R_9_4965001 chr3R_4965001 KN35_1-HE 2193 chr3R 4975932 4975967 chr3R 4976034 4976069 35 102 3.5 6.0 4.8 6.0 137 chr3R 4975932 intergenic not near genes chr3R 4976000 intergenic not near genes chr3R 4976069 intergenic not near genes chr3R_35_4975001 chr3R_4975001 KN35_1-HE 2194 chr3R 4981408 4981441 chr3R 4981488 4981521 6 80 5.5 1.5 3.5 1.3 113 chr3R 4981408 intergenic not near genes chr3R 4981464 intergenic not near genes chr3R 4981521 intergenic CG14662 - chr3R_6_4980001 chr3R_4980001 KN35_1-HE 2195 chr3R 5045842 5045878 chr3R 5052945 5052981 HMS-Beagle 21 7103 5.5 3.5 4.5 3.8 7139 chr3R 5045842 intron CR43635 - chr3R 5049412 intergenic not near genes chr3R 5052981 intergenic CR45588 - chr3R_21_5045001 chr3R_5045001 KN35_1-HE 2196 chr3R 5067978 5068014 chr3R 5073496 5073532 mdg3 27 5518 7.5 6.0 6.8 3.5 5554 chr3R 5067978 intergenic not near genes chr3R 5070755 intergenic not near genes chr3R 5073532 intergenic not near genes chr3R_27_5070001 chr3R_5070001 KN35_1-HE 2197 chr3R 5105555 5105572 chr3R 5105638 5105645 5 80 5.5 6.5 6.0 0.7 90 chr3R 5105555 intergenic not near genes chr3R 5105600 intergenic not near genes chr3R 5105645 intergenic not near genes chr3R_5_5105001 chr3R_5105001 KN35_1-HE 2198 chr3R 5236217 5236246 chr3R 5236346 5236375 15 129 4.0 3.0 3.5 3.3 158 chr3R 5236217 3` UTR,3` UTR Mms19 +,rtp - chr3R 5236296 3` UTR rtp - chr3R 5236375 3` UTR rtp - chr3R_15_5235001 chr3R_5235001 KN35_1-HE 2199 chr3R 5250881 5250915 chr3R 5250994 5251026 5 111 2.5 3.0 2.8 1.3 145 chr3R 5250881 intron CG12163 - chr3R 5250954 intron CG12163 - chr3R 5251026 intron CG12163 - chr3R_5_5250001 chr3R_5250001 KN35_1-HE 2200 chr3R 5278089 5278121 chr3R 5278171 5278203 18 82 2.0 2.5 2.2 5.6 114 chr3R 5278089 intron mtd - chr3R 5278146 intron mtd - chr3R 5278203 intron mtd - chr3R_18_5275001 chr3R_5275001 KN35_1-HE 2201 chr3R 5338395 5338427 chr3R 5343573 5343605 Rt1c 18 5178 4.5 6.0 5.2 2.9 5210 chr3R 5338395 intron mtd - chr3R 5341000 intron mtd - chr3R 5343605 intron mtd - chr3R_18_5340001 chr3R_5340001 KN35_1-HE 2202 chr3R 5385971 5386006 chr3R 5386143 5386176 4 172 1.0 3.5 2.2 1.2 205 chr3R 5385971 intron kkv - chr3R 5386074 intron kkv - chr3R 5386176 intron kkv - chr3R_4_5385001 chr3R_5385001 KN35_1-HE 2203 chr3R 5445959 5445987 chr3R 5452420 5452448 Burdock 7 6461 5.0 4.0 4.5 1.3 6489 chr3R 5445959 intron CG14669 + chr3R 5449204 intron CG14669 + chr3R 5452448 intron CG14669 + chr3R_7_5445001 chr3R_5445001 KN35_1-HE 2204 chr3R 5680784 5680819 chr3R 5680869 5680904 10 85 3.5 5.5 4.5 1.8 120 chr3R 5680784 3` UTR Rab23 - chr3R 5680844 3` UTR Rab23 - chr3R 5680904 3` UTR Rab23 - chr3R_10_5680001 chr3R_5680001 KN35_1-HE 2205 chr3R 5688779 5688811 chr3R 5688901 5688933 13 122 3.5 3.5 3.5 2.9 154 chr3R 5688779 intron plx + chr3R 5688856 intron plx + chr3R 5688933 intron plx + chr3R_13_5685001 chr3R_5685001 KN35_1-HE 2206 chr3R 5746021 5746043 chr3R 5746263 5746285 pogo 6 242 2.5 4.0 3.2 1.4 264 chr3R 5746021 3` UTR Madm + chr3R 5746153 3` UTR Madm + chr3R 5746285 3` UTR Madm + chr3R_6_5745001 chr3R_5745001 KN35_1-HE 2207 chr3R 5747013 5747042 chr3R 5753205 5753234 diver 9 6192 3.5 2.0 2.8 2.4 6221 chr3R 5747013 intergenic Madm + chr3R 5750124 intergenic not near genes chr3R 5753234 intergenic CG2091 - chr3R_9_5750001 chr3R_5750001 KN35_1-HE 2208 chr3R 5809110 5809138 chr3R 5809361 5809389 pogo 13 251 2.5 3.0 2.8 3.4 279 chr3R 5809110 3` UTR CG11000 + chr3R 5809250 3` UTR CG11000 + chr3R 5809389 3` UTR CG11000 + chr3R_13_5805001 chr3R_5805001 KN35_1-HE 2209 chr3R 5822377 5822393 chr3R 5823545 5823561 1360 6 1168 4.0 2.5 3.2 1.4 1184 chr3R 5822377 3` UTR CG2023 - chr3R 5822969 3` UTR CG2023 - chr3R 5823561 3` UTR CG2023 - chr3R_6_5820001 chr3R_5820001 KN35_1-HE 2210 chr3R 5822402 5822413 chr3R 5823570 5823581 1360 7 1168 3.0 6.0 4.5 1.3 1179 chr3R 5822402 3` UTR CG2023 - chr3R 5822992 3` UTR CG2023 - chr3R 5823581 3` UTR CG2023 - chr3R_7_5820001 chr3R_5820001 KN35_1-HE 2211 chr3R 5927560 5927587 chr3R 5927799 5927826 pogo 14 239 0.5 4.5 2.5 4.0 266 chr3R 5927560 intron CG34113 - chr3R 5927693 intron CG34113 - chr3R 5927826 intron CG34113 - chr3R_14_5925001 chr3R_5925001 KN35_1-HE 2212 chr3R 5945297 5945306 chr3R 5945378 5945387 5 81 6.5 8.0 7.2 0.6 90 chr3R 5945297 intron CG34113 - chr3R 5945342 intron CG34113 - chr3R 5945387 intron CG34113 - chr3R_5_5945001 chr3R_5945001 KN35_1-HE 2213 chr3R 6015960 6015991 chr3R 6024442 6024473 Tirant 14 8481 5.5 2.0 3.8 2.9 8513 chr3R 6015960 intergenic not near genes chr3R 6020216 intergenic not near genes chr3R 6024473 intergenic not near genes chr3R_14_6020001 chr3R_6020001 KN35_1-HE 2214 chr3R 6121164 6121188 chr3R 6121383 6121407 BS 5 219 0.0 3.5 1.8 1.8 243 chr3R 6121164 intergenic not near genes chr3R 6121286 intergenic not near genes chr3R 6121407 intergenic not near genes chr3R_5_6120001 chr3R_6120001 KN35_1-HE 2215 chr3R 6124227 6124259 chr3R 6124312 6124344 16 85 6.0 5.5 5.8 2.4 117 chr3R 6124227 3` UTR Vha14-2 + chr3R 6124286 3` UTR Vha14-2 + chr3R 6124344 3` UTR Vha14-2 + chr3R_16_6120001 chr3R_6120001 KN35_1-HE 2216 chr3R 6158509 6158539 chr3R 6167092 6167123 Tirant 8 8581 7.5 1.5 4.5 1.5 8614 chr3R 6158509 intergenic not near genes chr3R 6162816 intergenic not near genes chr3R 6167123 intergenic CG1077 + chr3R_8_6160001 chr3R_6160001 KN35_1-HE 2217 chr3R 6170535 6170562 chr3R 6170630 6170657 8 95 2.5 0.0 1.2 3.6 122 chr3R 6170535 intergenic CG1077 + chr3R 6170596 intergenic CG1077 + chr3R 6170657 intergenic CG1077 + chr3R_8_6170001 chr3R_6170001 KN35_1-HE 2218 chr3R 6175170 6175206 chr3R 6182443 6182479 HMS-Beagle2 9 7273 1.5 2.5 2.0 3.0 7309 chr3R 6175170 intergenic Osi1 + chr3R 6178824 intron CR45194 + chr3R 6182479 intergenic CR45194 + chr3R_9_6175001 chr3R_6175001 KN35_1-HE 2219 chr3R 6187736 6187774 chr3R 6195512 6195550 8 7776 24.5 16.5 20.5 0.4 7814 chr3R 6187736 intron NPFR + chr3R 6191643 intron NPFR + chr3R 6195550 intergenic NPFR + chr3R_8_6190001 chr3R_6190001 KN35_1-HE 2220 chr3R 6206285 6206316 chr3R 6206502 6206534 BS 8 218 5.0 5.0 5.0 1.3 249 chr3R 6206285 exon Osi24 + chr3R 6206410 intron Osi24 + chr3R 6206534 intron Osi24 + chr3R_8_6205001 chr3R_6205001 KN35_1-HE 2221 chr3R 6222311 6222337 chr3R 6222393 6222419 9 82 4.5 1.0 2.8 2.4 108 chr3R 6222311 intergenic not near genes chr3R 6222365 intergenic not near genes chr3R 6222419 intergenic not near genes chr3R_9_6220001 chr3R_6220001 KN35_1-HE 2222 chr3R 6232268 6232275 chr3R 6232350 6232357 7 82 12.0 4.5 8.2 0.8 89 chr3R 6232268 intergenic not near genes chr3R 6232312 intergenic not near genes chr3R 6232357 intergenic not near genes chr3R_7_6230001 chr3R_6230001 KN35_1-HE 2223 chr3R 6428810 6428844 chr3R 6428913 6428946 19 103 1.5 3.0 2.2 5.9 136 chr3R 6428810 intron gpp + chr3R 6428878 intron gpp + chr3R 6428946 intron gpp + chr3R_19_6425001 chr3R_6425001 KN35_1-HE 2224 chr3R 6444815 6444827 chr3R 6444893 6444905 6 78 8.5 6.0 7.2 0.7 90 chr3R 6444815 intron gpp + chr3R 6444860 intron gpp + chr3R 6444905 intron gpp + chr3R_6_6440001 chr3R_6440001 KN35_1-HE 2225 chr3R 6444828 6444836 chr3R 6444892 6444914 4 74 6.5 5.5 6.0 0.6 86 chr3R 6444828 intron gpp + chr3R 6444871 intron gpp + chr3R 6444914 intron gpp + chr3R_4_6440001 chr3R_6440001 KN35_1-HE 2226 chr3R 6461576 6461612 chr3R 6461658 6461693 21 81 9.0 4.5 6.8 2.7 117 chr3R 6461576 intergenic not near genes chr3R 6461634 intergenic not near genes chr3R 6461693 intergenic not near genes chr3R_21_6460001 chr3R_6460001 KN35_1-HE 2227 chr3R 6479936 6479972 chr3R 6480012 6480049 18 77 2.5 5.5 4.0 3.6 113 chr3R 6479936 intron CG15186 + chr3R 6479992 intron CG15186 + chr3R 6480049 intron CG15186 + chr3R_18_6475001 chr3R_6475001 KN35_1-HE 2228 chr3R 6510024 6510055 chr3R 6515106 6515137 jockey 18 5081 3.0 4.0 3.5 4.0 5113 chr3R 6510024 intergenic not near genes chr3R 6512580 intergenic not near genes chr3R 6515137 intergenic not near genes chr3R_18_6510001 chr3R_6510001 KN35_1-HE 2229 chr3R 6523315 6523348 chr3R 6523692 6523725 12 377 3.5 5.0 4.2 2.3 410 chr3R 6523315 intergenic not near genes chr3R 6523520 intergenic not near genes chr3R 6523725 intergenic not near genes chr3R_12_6520001 chr3R_6520001 KN35_1-HE 2230 chr3R 6532103 6532140 chr3R 6532478 6532515 20 375 7.0 6.0 6.5 2.7 412 chr3R 6532103 intron dpr11 - chr3R 6532309 intron dpr11 - chr3R 6532515 intron dpr11 - chr3R_20_6530001 chr3R_6530001 KN35_1-HE 2231 chr3R 6534032 6534046 chr3R 6534121 6534135 8 89 0.0 13.5 6.8 1.0 103 chr3R 6534032 intron dpr11 - chr3R 6534084 intron dpr11 - chr3R 6534135 intron dpr11 - chr3R_8_6530001 chr3R_6530001 KN35_1-HE 2232 chr3R 6561946 6561982 chr3R 6562031 6562067 18 85 4.0 2.5 3.2 4.3 121 chr3R 6561946 intron dpr11 - chr3R 6562006 intron dpr11 - chr3R 6562067 intron dpr11 - chr3R_18_6560001 chr3R_6560001 KN35_1-HE 2233 chr3R 6639911 6639934 chr3R 6639990 6640013 12 78 4.5 0.0 2.2 3.8 102 chr3R 6639911 intergenic not near genes chr3R 6639962 intergenic not near genes chr3R 6640013 intergenic not near genes chr3R_12_6635001 chr3R_6635001 KN35_1-HE 2234 chr3R 6689337 6689371 chr3R 6689420 6689454 14 83 3.0 3.0 3.0 3.5 117 chr3R 6689337 intergenic Ccp84Af - chr3R 6689396 intergenic Ccp84Af - chr3R 6689454 intergenic Ccp84Af - chr3R_14_6685001 chr3R_6685001 KN35_1-HE 2235 chr3R 6693644 6693673 chr3R 6693732 6693761 10 88 3.0 4.0 3.5 2.2 117 chr3R 6693644 intergenic Ccp84Ad + chr3R 6693702 intergenic Ccp84Ad + chr3R 6693761 intergenic Ccp84Ad + chr3R_10_6690001 chr3R_6690001 KN35_1-HE 2236 chr3R 6693980 6694016 chr3R 6694075 6694111 13 95 1.0 4.0 2.5 3.7 131 chr3R 6693980 intergenic Ccp84Ad + chr3R 6694046 intergenic not near genes chr3R 6694111 intergenic not near genes chr3R_13_6690001 chr3R_6690001 KN35_1-HE 2237 chr3R 6705700 6705715 chr3R 6705925 6705940 8 225 2.0 6.0 4.0 1.6 240 chr3R 6705700 intergenic not near genes chr3R 6705820 intergenic not near genes chr3R 6705940 intergenic not near genes chr3R_8_6705001 chr3R_6705001 KN35_1-HE 2238 chr3R 6725158 6725192 chr3R 6725294 6725328 23 136 4.0 9.0 6.5 3.1 170 chr3R 6725158 intron pb - chr3R 6725243 intron pb - chr3R 6725328 intron pb - chr3R_23_6725001 chr3R_6725001 KN35_1-HE 2239 chr3R 6737497 6737531 chr3R 6739285 6739319 Doc 9 1788 2.0 2.5 2.2 2.8 1822 chr3R 6737497 intron pb - chr3R 6738408 intron pb - chr3R 6739319 intron pb - chr3R_9_6735001 chr3R_6735001 KN35_1-HE 2240 chr3R 6757124 6757149 chr3R 6757215 6757240 14 91 40.5 43.5 42.0 0.3 116 chr3R 6757124 intron bcd - chr3R 6757182 intron bcd - chr3R 6757240 intron bcd - chr3R_14_6755001 chr3R_6755001 KN35_1-HE 2241 chr3R 6797171 6797198 chr3R 6797260 6797287 15 89 3.5 3.0 3.2 3.6 116 chr3R 6797171 intron Dfd + chr3R 6797229 intron Dfd + chr3R 6797287 intron Dfd + chr3R_15_6795001 chr3R_6795001 KN35_1-HE 2242 chr3R 6835366 6835397 chr3R 6835495 6835526 10 129 3.0 2.5 2.8 2.6 160 chr3R 6835366 intron Scr - chr3R 6835446 intron Scr - chr3R 6835526 intron Scr - chr3R_10_6835001 chr3R_6835001 KN35_1-HE 2243 chr3R 6856383 6856400 chr3R 6856501 6856518 7 118 4.0 6.0 5.0 1.2 135 chr3R 6856383 intergenic not near genes chr3R 6856450 intergenic not near genes chr3R 6856518 intergenic not near genes chr3R_7_6855001 chr3R_6855001 KN35_1-HE 2244 chr3R 6890202 6890240 chr3R 6890389 6890427 22 187 3.5 4.5 4.0 4.4 225 chr3R 6890202 intergenic not near genes chr3R 6890314 intergenic not near genes chr3R 6890427 intergenic not near genes chr3R_22_6890001 chr3R_6890001 KN35_1-HE 2245 chr3R 6891243 6891269 chr3R 6891320 6891346 11 77 4.5 3.0 3.8 2.3 103 chr3R 6891243 intergenic not near genes chr3R 6891294 intergenic not near genes chr3R 6891346 intergenic not near genes chr3R_11_6890001 chr3R_6890001 KN35_1-HE 2246 chr3R 6912100 6912131 chr3R 6912212 6912243 26 112 8.0 5.0 6.5 3.5 143 chr3R 6912100 intron Antp - chr3R 6912172 intron Antp - chr3R 6912243 intron Antp - chr3R_26_6910001 chr3R_6910001 KN35_1-HE 2247 chr3R 6914106 6914136 chr3R 6914184 6914214 23 78 3.5 4.5 4.0 4.6 108 chr3R 6914106 intron Antp - chr3R 6914160 intron Antp - chr3R 6914214 intron Antp - chr3R_23_6910001 chr3R_6910001 KN35_1-HE 2248 chr3R 6918060 6918093 chr3R 6918139 6918172 17 79 5.5 4.5 5.0 2.8 112 chr3R 6918060 intron Antp - chr3R 6918116 intron Antp - chr3R 6918172 intron Antp - chr3R_17_6915001 chr3R_6915001 KN35_1-HE 2249 chr3R 6939125 6939157 chr3R 6939207 6939238 20 82 6.5 3.5 5.0 3.3 113 chr3R 6939125 intron Antp - chr3R 6939182 intron Antp - chr3R 6939238 intron Antp - chr3R_20_6935001 chr3R_6935001 KN35_1-HE 2250 chr3R 6961183 6961193 chr3R 6961263 6961273 4 80 5.5 14.0 9.8 0.4 90 chr3R 6961183 intron Antp - chr3R 6961228 intron Antp - chr3R 6961273 intron Antp - chr3R_4_6960001 chr3R_6960001 KN35_1-HE 2251 chr3R 6961194 6961204 chr3R 6961262 6961284 6 78 5.0 13.0 9.0 0.6 90 chr3R 6961194 intron Antp - chr3R 6961239 intron Antp - chr3R 6961284 intron Antp - chr3R_6_6960001 chr3R_6960001 KN35_1-HE 2252 chr3R 7060259 7060288 chr3R 7060341 7060370 7 82 1.5 0.0 0.8 3.9 111 chr3R 7060259 3` UTR dj + chr3R 7060314 3` UTR dj + chr3R 7060370 3` UTR dj + chr3R_7_7060001 chr3R_7060001 KN35_1-HE 2253 chr3R 7103282 7103317 chr3R 7103359 7103378 32 76 13.0 8.0 10.5 2.8 96 chr3R 7103282 intron Alh - chr3R 7103330 intron Alh - chr3R 7103378 intron Alh - chr3R_32_7100001 chr3R_7100001 KN35_1-HE 2254 chr3R 7126504 7126534 chr3R 7126600 7126630 12 96 4.0 2.0 3.0 3.0 126 chr3R 7126504 3` UTR CG10068 - chr3R 7126567 3` UTR CG10068 - chr3R 7126630 3` UTR CG10068 - chr3R_12_7125001 chr3R_7125001 KN35_1-HE 2255 chr3R 7173678 7173709 chr3R 7173758 7173790 21 81 6.0 12.0 9.0 2.1 112 chr3R 7173678 intron sas + chr3R 7173734 intron sas + chr3R 7173790 intron sas + chr3R_21_7170001 chr3R_7170001 KN35_1-HE 2256 chr3R 7217460 7217489 chr3R 7217682 7217711 9 222 2.5 5.0 3.8 1.9 251 chr3R 7217460 intergenic CG14605 -,CG14606 - chr3R 7217586 intergenic CG14605 - chr3R 7217711 3` UTR CG14605 - chr3R_9_7215001 chr3R_7215001 KN35_1-HE 2257 chr3R 7396371 7396387 chr3R 7396475 7396491 4 104 9.0 5.5 7.2 0.5 120 chr3R 7396371 intergenic not near genes chr3R 7396431 intergenic not near genes chr3R 7396491 intergenic not near genes chr3R_4_7395001 chr3R_7395001 KN35_1-HE 2258 chr3R 7402170 7402203 chr3R 7402277 7402310 14 106 6.0 3.0 4.5 2.5 140 chr3R 7402170 intergenic not near genes chr3R 7402240 intergenic not near genes chr3R 7402310 intergenic not near genes chr3R_14_7400001 chr3R_7400001 KN35_1-HE 2259 chr3R 7447992 7448008 chr3R 7448071 7448087 8 79 5.0 6.5 5.8 1.2 95 chr3R 7447992 intergenic not near genes chr3R 7448040 intergenic not near genes chr3R 7448087 intergenic not near genes chr3R_8_7445001 chr3R_7445001 KN35_1-HE 2260 chr3R 7511765 7511797 chr3R 7511847 7511878 8 82 4.0 7.5 5.8 1.2 113 chr3R 7511765 intron alpha-Est8 - chr3R 7511822 intron alpha-Est8 - chr3R 7511878 intron alpha-Est8 - chr3R_8_7510001 chr3R_7510001 KN35_1-HE 2261 chr3R 7589792 7589828 chr3R 7589914 7589950 19 122 3.0 2.0 2.5 5.4 158 chr3R 7589792 intron CG34127 - chr3R 7589871 intron CG34127 - chr3R 7589950 intron CG34127 - chr3R_19_7585001 chr3R_7585001 KN35_1-HE 2262 chr3R 7625299 7625319 chr3R 7625748 7625768 13 449 4.5 2.5 3.5 2.9 469 chr3R 7625299 intron CG34127 - chr3R 7625534 intron CG34127 - chr3R 7625768 intron CG34127 - chr3R_13_7625001 chr3R_7625001 KN35_1-HE 2263 chr3R 7655003 7655039 chr3R 7655086 7655122 13 83 4.5 4.0 4.2 2.5 119 chr3R 7655003 intergenic not near genes chr3R 7655062 intergenic not near genes chr3R 7655122 intergenic not near genes chr3R_13_7655001 chr3R_7655001 KN35_1-HE 2264 chr3R 7677913 7677946 chr3R 7678027 7678060 14 114 1.5 5.0 3.2 3.3 147 chr3R 7677913 intron Nlg1 + chr3R 7677986 intron Nlg1 + chr3R 7678060 intron Nlg1 + chr3R_14_7675001 chr3R_7675001 KN35_1-HE 2265 chr3R 7680843 7680870 chr3R 7681475 7681502 10 631 3.5 0.5 2.0 3.3 659 chr3R 7680843 intron Nlg1 + chr3R 7681172 intron Nlg1 + chr3R 7681502 intron Nlg1 + chr3R_10_7680001 chr3R_7680001 KN35_1-HE 2266 chr3R 7694574 7694610 chr3R 7713636 7713672 invader3 14 19062 5.0 1.5 3.2 3.3 19098 chr3R 7694574 3` UTR Nlg1 + chr3R 7704123 intergenic not near genes chr3R 7713672 intergenic not near genes chr3R_14_7700001 chr3R_7700001 KN35_1-HE 2267 chr3R 7729465 7729498 chr3R 7737404 7737437 Stalker2 18 7939 5.5 7.5 6.5 2.4 7972 chr3R 7729465 intergenic not near genes chr3R 7733451 intergenic not near genes chr3R 7737437 intergenic not near genes chr3R_18_7730001 chr3R_7730001 KN35_1-HE 2268 chr3R 7834678 7834703 chr3R 7834836 7834861 12 158 3.5 6.5 5.0 2.0 183 chr3R 7834678 intron CG34384 + chr3R 7834770 intron CG34384 + chr3R 7834861 intron CG34384 + chr3R_12_7830001 chr3R_7830001 KN35_1-HE 2269 chr3R 7836385 7836419 chr3R 7836580 7836614 5 195 4.0 5.0 4.5 0.9 229 chr3R 7836385 intron CG34384 + chr3R 7836500 intron CG34384 + chr3R 7836614 intron CG34384 + chr3R_5_7835001 chr3R_7835001 KN35_1-HE 2270 chr3R 7849641 7849673 chr3R 7850809 7850841 1360 17 1168 2.0 4.5 3.2 4.0 1200 chr3R 7849641 intron CG34384 + chr3R 7850241 intron CG34384 + chr3R 7850841 intron CG34384 + chr3R_17_7850001 chr3R_7850001 KN35_1-HE 2271 chr3R 7944052 7944082 chr3R 7944224 7944255 11 172 2.0 6.0 4.0 2.2 203 chr3R 7944052 intron dsx - chr3R 7944154 intron dsx - chr3R 7944255 intron dsx - chr3R_11_7940001 chr3R_7940001 KN35_1-HE 2272 chr3R 7948445 7948469 chr3R 7948523 7948547 7 76 3.5 4.0 3.8 1.5 102 chr3R 7948445 intron dsx - chr3R 7948496 intron dsx - chr3R 7948547 intron dsx - chr3R_7_7945001 chr3R_7945001 KN35_1-HE 2273 chr3R 7956631 7956659 chr3R 7956725 7956753 10 94 3.0 6.5 4.8 1.7 122 chr3R 7956631 intron dsx - chr3R 7956692 intron dsx - chr3R 7956753 intron dsx - chr3R_10_7955001 chr3R_7955001 KN35_1-HE 2274 chr3R 7965308 7965346 chr3R 7965397 7965435 15 89 5.0 7.0 6.0 2.1 127 chr3R 7965308 intron dsx - chr3R 7965372 intron dsx - chr3R 7965435 intron dsx - chr3R_15_7965001 chr3R_7965001 KN35_1-HE 2275 chr3R 7973311 7973345 chr3R 7974374 7974408 1360 16 1063 5.0 3.0 4.0 3.2 1097 chr3R 7973311 intergenic not near genes chr3R 7973860 intergenic not near genes chr3R 7974408 3` UTR CD98hc - chr3R_16_7970001 chr3R_7970001 KN35_1-HE 2276 chr3R 8033140 8033160 chr3R 8033221 8033241 5 81 5.5 1.5 3.5 1.1 101 chr3R 8033140 intergenic CG11035 -,unc-45 + chr3R 8033190 intergenic unc-45 +,CG11035 - chr3R 8033241 intergenic unc-45 +,CG11035 - chr3R_5_8030001 chr3R_8030001 KN35_1-HE 2277 chr3R 8069996 8070009 chr3R 8070103 8070116 10 107 0.0 10.0 5.0 1.7 120 chr3R 8069996 intron mAChR-B + chr3R 8070056 intron mAChR-B + chr3R 8070116 intron mAChR-B + chr3R_10_8070001 chr3R_8070001 KN35_1-HE 2278 chr3R 8070911 8070926 chr3R 8070993 8071008 7 82 11.0 9.0 10.0 0.6 97 chr3R 8070911 intron mAChR-B + chr3R 8070960 intron mAChR-B + chr3R 8071008 intron mAChR-B + chr3R_7_8070001 chr3R_8070001 KN35_1-HE 2279 chr3R 8090566 8090570 chr3R 8094044 8094048 297 5 3478 9.0 14.0 11.5 0.4 3482 chr3R 8090566 intergenic CR44330 + chr3R 8092307 intergenic not near genes chr3R 8094048 intergenic CG7900 + chr3R_5_8090001 chr3R_8090001 KN35_1-HE 2280 chr3R 8094407 8094441 chr3R 8099713 8099747 Transpac 17 5306 4.5 5.0 4.8 2.9 5340 chr3R 8094407 intron CG7900 + chr3R 8097077 intron CG7900 + chr3R 8099747 intron CG7900 + chr3R_17_8095001 chr3R_8095001 KN35_1-HE 2281 chr3R 8101763 8101789 chr3R 8104848 8104874 G2 12 3085 3.0 6.0 4.5 2.2 3111 chr3R 8101763 exon CG7900 + chr3R 8103318 intron CG7900 + chr3R 8104874 3` UTR CG7900 + chr3R_12_8100001 chr3R_8100001 KN35_1-HE 2282 chr3R 8144763 8144785 chr3R 8144848 8144870 11 85 5.5 5.5 5.5 1.7 107 chr3R 8144763 intergenic not near genes chr3R 8144816 intergenic not near genes chr3R 8144870 intergenic not near genes chr3R_11_8140001 chr3R_8140001 KN35_1-HE 2283 chr3R 8207554 8207585 chr3R 8208400 8208431 F-element 11 846 2.5 5.5 4.0 2.2 877 chr3R 8207554 intergenic not near genes chr3R 8207992 intergenic not near genes chr3R 8208431 intergenic not near genes chr3R_11_8205001 chr3R_8205001 KN35_1-HE 2284 chr3R 8293995 8294014 chr3R 8294174 8294193 7 179 1.5 9.5 5.5 1.1 198 chr3R 8293995 3` UTR CG9626 - chr3R 8294094 3` UTR CG9626 - chr3R 8294193 3` UTR CG9626 - chr3R_7_8290001 chr3R_8290001 KN35_1-HE 2285 chr3R 8403009 8403041 chr3R 8412176 8412208 roo 29 9166 12.5 16.5 14.5 1.9 9199 chr3R 8403009 intron CG45263 - chr3R 8407608 intron CG45263 - chr3R 8412208 intron CG45263 - chr3R_29_8405001 chr3R_8405001 KN35_1-HE 2286 chr3R 8412424 8412462 chr3R 8412550 8412588 24 126 6.0 7.0 6.5 3.2 164 chr3R 8412424 intron CG45263 - chr3R 8412506 intron CG45263 - chr3R 8412588 intron CG45263 - chr3R_24_8410001 chr3R_8410001 KN35_1-HE 2287 chr3R 8478079 8478110 chr3R 8478160 8478191 14 81 2.0 5.0 3.5 3.1 112 chr3R 8478079 intergenic CG45263 - chr3R 8478135 intergenic not near genes chr3R 8478191 intergenic not near genes chr3R_14_8475001 chr3R_8475001 KN35_1-HE 2288 chr3R 8482897 8482930 chr3R 8482974 8483007 11 74 2.5 5.5 4.0 2.2 110 chr3R 8482897 intergenic not near genes chr3R 8482952 intergenic not near genes chr3R 8483007 intergenic not near genes chr3R_11_8480001 chr3R_8480001 KN35_1-HE 2289 chr3R 8538348 8538366 chr3R 8538432 8538450 6 84 3.5 2.5 3.0 1.5 102 chr3R 8538348 intergenic not near genes chr3R 8538399 intergenic not near genes chr3R 8538450 intergenic not near genes chr3R_6_8535001 chr3R_8535001 KN35_1-HE 2290 chr3R 8570476 8570510 chr3R 8575113 8575147 HMS-Beagle 11 4636 5.5 2.5 4.0 2.2 4671 chr3R 8570476 intergenic not near genes chr3R 8572812 intergenic not near genes chr3R 8575147 intergenic not near genes chr3R_11_8570001 chr3R_8570001 KN35_1-HE 2291 chr3R 8601770 8601799 chr3R 8610924 8610953 roo 13 9154 7.0 6.0 6.5 1.7 9183 chr3R 8601770 intron 5-HT2B + chr3R 8606362 intron 5-HT2B + chr3R 8610953 intron 5-HT2B + chr3R_13_8605001 chr3R_8605001 KN35_1-HE 2292 chr3R 8621539 8621555 chr3R 8621617 8621633 11 78 6.5 7.5 7.0 1.4 94 chr3R 8621539 intron 5-HT2B + chr3R 8621586 intron 5-HT2B + chr3R 8621633 intron 5-HT2B + chr3R_11_8620001 chr3R_8620001 KN35_1-HE 2293 chr3R 8638060 8638093 chr3R 8638172 8638205 9 112 2.0 4.0 3.0 2.2 145 chr3R 8638060 intergenic not near genes chr3R 8638132 intergenic not near genes chr3R 8638205 intergenic not near genes chr3R_9_8635001 chr3R_8635001 KN35_1-HE 2294 chr3R 8707356 8707385 chr3R 8709798 8709827 jockey 10 2442 4.5 9.0 6.8 1.3 2471 chr3R 8707356 intergenic not near genes chr3R 8708592 intergenic not near genes chr3R 8709827 intergenic not near genes chr3R_10_8705001 chr3R_8705001 KN35_1-HE 2295 chr3R 8761363 8761388 chr3R 8761582 8761607 12 219 2.0 4.5 3.2 2.9 244 chr3R 8761363 intron,intron CG11768 -,CG34135 - chr3R 8761485 intron,intron CG11768 -,CG34135 - chr3R 8761607 intron,intron CG11768 -,CG34135 - chr3R_12_8760001 chr3R_8760001 KN35_1-HE 2296 chr3R 8799620 8799656 chr3R 8799736 8799772 15 116 4.5 3.0 3.8 3.1 152 chr3R 8799620 intron,intron Pif1A -,Pif1B - chr3R 8799696 intron,intron Pif1A -,Pif1B - chr3R 8799772 intron,intron Pif1A -,Pif1B - chr3R_15_8795001 chr3R_8795001 KN35_1-HE 2297 chr3R 8894870 8894905 chr3R 8896027 8896062 1360 18 1157 5.5 7.5 6.5 2.4 1192 chr3R 8894870 intron pyd - chr3R 8895466 intron pyd - chr3R 8896062 intron pyd - chr3R_18_8895001 chr3R_8895001 KN35_1-HE 2298 chr3R 8917892 8917908 chr3R 8917973 8917989 10 81 8.0 8.5 8.2 1.1 97 chr3R 8917892 intron pyd - chr3R 8917940 intron pyd - chr3R 8917989 intron pyd - chr3R_10_8915001 chr3R_8915001 KN35_1-HE 2299 chr3R 9036376 9036407 chr3R 9036455 9036486 12 79 6.5 5.5 6.0 1.7 110 chr3R 9036376 intron neur - chr3R 9036431 intron neur - chr3R 9036486 intron neur - chr3R_12_9035001 chr3R_9035001 KN35_1-HE 2300 chr3R 9101839 9101870 chr3R 9101938 9101969 15 99 2.5 7.5 5.0 2.5 130 chr3R 9101839 intron pum - chr3R 9101904 intron pum - chr3R 9101969 intron pum - chr3R_15_9100001 chr3R_9100001 KN35_1-HE 2301 chr3R 9104477 9104498 chr3R 9104568 9104589 9 91 3.5 2.0 2.8 2.4 112 chr3R 9104477 intron pum - chr3R 9104533 intron pum - chr3R 9104589 intron pum - chr3R_9_9100001 chr3R_9100001 KN35_1-HE 2302 chr3R 9141140 9141173 chr3R 9141225 9141258 22 85 4.0 6.5 5.2 3.5 118 chr3R 9141140 intron pum - chr3R 9141199 intron pum - chr3R 9141258 intron pum - chr3R_22_9140001 chr3R_9140001 KN35_1-HE 2303 chr3R 9151069 9151105 chr3R 9151152 9151188 20 83 4.5 9.0 6.8 2.6 119 chr3R 9151069 intron pum - chr3R 9151128 intron pum - chr3R 9151188 intron pum - chr3R_20_9150001 chr3R_9150001 KN35_1-HE 2304 chr3R 9251430 9251464 chr3R 9251511 9251545 15 81 4.5 2.5 3.5 3.3 115 chr3R 9251430 3` UTR CG8420 + chr3R 9251488 intergenic CG8420 +,St2 + chr3R 9251545 intergenic CG8420 +,St2 + chr3R_15_9250001 chr3R_9250001 KN35_1-HE 2305 chr3R 9264776 9264806 chr3R 9265004 9265034 15 228 2.0 6.0 4.0 3.0 258 chr3R 9264776 intergenic Aats-trp - chr3R 9264905 intergenic Aats-trp - chr3R 9265034 3` UTR Aats-trp - chr3R_15_9260001 chr3R_9260001 KN35_1-HE 2306 chr3R 9278779 9278811 chr3R 9284040 9284072 Rt1a 13 5261 5.5 3.5 4.5 2.4 5293 chr3R 9278779 intergenic not near genes chr3R 9281426 intergenic not near genes chr3R 9284072 intergenic not near genes chr3R_13_9280001 chr3R_9280001 KN35_1-HE 2307 chr3R 9304528 9304539 chr3R 9311816 9311827 Stalker4 5 7288 12.5 2.0 7.2 0.6 7299 chr3R 9304528 intron CG8861 - chr3R 9308178 intron CG8861 - chr3R 9311827 intron CG8861 - chr3R_5_9305001 chr3R_9305001 KN35_1-HE 2308 chr3R 9313186 9313214 chr3R 9313275 9313303 9 89 4.0 3.5 3.8 1.9 117 chr3R 9313186 intron CG8861 - chr3R 9313244 intron CG8861 - chr3R 9313303 intron CG8861 - chr3R_9_9310001 chr3R_9310001 KN35_1-HE 2309 chr3R 9319578 9319607 chr3R 9320005 9320040 jockey 13 435 7.5 5.5 6.5 1.7 462 chr3R 9319578 intron CG8861 - chr3R 9319809 intron CG8861 - chr3R 9320040 intron CG8861 - chr3R_13_9315001 chr3R_9315001 KN35_1-HE 2310 chr3R 9361819 9361843 chr3R 9362061 9362085 pogo 11 242 2.5 5.0 3.8 2.3 266 chr3R 9361819 3` UTR CG45050 + chr3R 9361952 3` UTR CG45050 + chr3R 9362085 3` UTR CG45050 + chr3R_11_9360001 chr3R_9360001 KN35_1-HE 2311 chr3R 9379169 9379177 chr3R 9379252 9379260 5 83 0.0 6.5 3.2 1.2 91 chr3R 9379169 intron FER - chr3R 9379214 intron FER - chr3R 9379260 intron FER - chr3R_5_9375001 chr3R_9375001 KN35_1-HE 2312 chr3R 9477354 9477380 chr3R 9477431 9477457 18 76 2.5 7.0 4.8 3.1 103 chr3R 9477354 intron CG16779 - chr3R 9477406 intron CG16779 - chr3R 9477457 intron CG16779 - chr3R_18_9475001 chr3R_9475001 KN35_1-HE 2313 chr3R 9488753 9488788 chr3R 9488876 9488911 26 123 6.0 10.0 8.0 2.9 158 chr3R 9488753 intron CG16779 - chr3R 9488832 intron CG16779 - chr3R 9488911 intron CG16779 - chr3R_26_9485001 chr3R_9485001 KN35_1-HE 2314 chr3R 9545919 9545954 chr3R 9546029 9546064 24 110 4.5 8.5 6.5 3.2 145 chr3R 9545919 intron mura - chr3R 9545992 intron mura - chr3R 9546064 intron mura - chr3R_24_9545001 chr3R_9545001 KN35_1-HE 2315 chr3R 9570267 9570296 chr3R 9570407 9570436 12 140 3.5 4.0 3.8 2.5 169 chr3R 9570267 intergenic CG16790 -,CG9396 - chr3R 9570352 intergenic CG9396 -,CG16790 - chr3R 9570436 3` UTR CG9396 - chr3R_12_9570001 chr3R_9570001 KN35_1-HE 2316 chr3R 9611879 9611905 chr3R 9611962 9611988 9 83 4.0 0.0 2.0 3.0 109 chr3R 9611879 intron CG8312 + chr3R 9611934 intron CG8312 + chr3R 9611988 intron CG8312 + chr3R_9_9610001 chr3R_9610001 KN35_1-HE 2317 chr3R 9699973 9699999 chr3R 9700063 9700089 1360 10 90 7.0 7.5 7.2 1.2 116 chr3R 9699973 intron Unc-115a - chr3R 9700031 intron Unc-115a - chr3R 9700089 intron Unc-115a - chr3R_10_9700001 chr3R_9700001 KN35_1-HE 2318 chr3R 10018698 10018712 chr3R 10018780 10018794 4 82 3.0 5.5 4.2 0.8 96 chr3R 10018698 intron Mical - chr3R 10018746 intron Mical - chr3R 10018794 intron Mical - chr3R_4_10015001 chr3R_10015001 KN35_1-HE 2319 chr3R 10216569 10216589 chr3R 10216682 10216702 14 113 6.5 3.0 4.8 2.4 133 chr3R 10216569 intron Syn + chr3R 10216636 intron Syn + chr3R 10216702 intron Syn + chr3R_14_10215001 chr3R_10215001 KN35_1-HE 2320 chr3R 10231785 10231814 chr3R 10237363 10237392 mdg3 9 5578 2.5 6.0 4.2 1.7 5607 chr3R 10231785 intron CG42795 + chr3R 10234588 intron CG42795 + chr3R 10237392 intron CG42795 + chr3R_9_10230001 chr3R_10230001 KN35_1-HE 2321 chr3R 10291419 10291458 chr3R 10291511 10291550 37 92 7.0 8.0 7.5 4.4 131 chr3R 10291419 exon CG43143 + chr3R 10291484 intron CG43143 + chr3R 10291550 intron CG43143 + chr3R_37_10290001 chr3R_10290001 KN35_1-HE 2322 chr3R 10450657 10450680 chr3R 10450754 10450777 11 97 7.5 2.0 4.8 1.9 120 chr3R 10450657 intergenic not near genes chr3R 10450717 intergenic not near genes chr3R 10450777 intergenic not near genes chr3R_11_10450001 chr3R_10450001 KN35_1-HE 2323 chr3R 10460515 10460540 chr3R 10460616 10460641 11 101 2.0 2.5 2.2 3.4 126 chr3R 10460515 intergenic not near genes chr3R 10460578 intergenic CR44939 + chr3R 10460641 intergenic CR44939 + chr3R_11_10460001 chr3R_10460001 KN35_1-HE 2324 chr3R 10531867 10531899 chr3R 10531949 10531981 27 82 5.5 0.5 3.0 6.8 114 chr3R 10531867 intron hth - chr3R 10531924 intron hth - chr3R 10531981 intron hth - chr3R_27_10530001 chr3R_10530001 KN35_1-HE 2325 chr3R 10621731 10621761 chr3R 10621823 10621853 16 92 6.5 7.0 6.8 2.1 122 chr3R 10621731 intergenic not near genes chr3R 10621792 intergenic not near genes chr3R 10621853 intergenic not near genes chr3R_16_10620001 chr3R_10620001 KN35_1-HE 2326 chr3R 10700073 10700108 chr3R 10700161 10700196 16 88 5.0 4.0 4.5 2.9 123 chr3R 10700073 exon pug + chr3R 10700134 intron pug + chr3R 10700196 intron pug + chr3R_16_10700001 chr3R_10700001 KN35_1-HE 2327 chr3R 10716306 10716336 chr3R 10716650 10716680 12 344 4.0 2.5 3.2 2.9 374 chr3R 10716306 intergenic CG4073 + chr3R 10716493 intergenic not near genes chr3R 10716680 intergenic not near genes chr3R_12_10715001 chr3R_10715001 KN35_1-HE 2328 chr3R 10728388 10728423 chr3R 10728475 10728510 17 87 3.5 1.0 2.2 5.3 122 chr3R 10728388 intergenic not near genes chr3R 10728449 intergenic not near genes chr3R 10728510 intergenic not near genes chr3R_17_10725001 chr3R_10725001 KN35_1-HE 2329 chr3R 10785809 10785842 chr3R 10785889 10785922 11 80 3.5 4.0 3.8 2.3 113 chr3R 10785809 intron Rbp1 + chr3R 10785866 intron Rbp1 + chr3R 10785922 intron Rbp1 + chr3R_11_10785001 chr3R_10785001 KN35_1-HE 2330 chr3R 10801923 10801959 chr3R 10802028 10802064 15 105 5.0 2.5 3.8 3.1 141 chr3R 10801923 exon CG14692 - chr3R 10801994 exon CG14692 - chr3R 10802064 exon CG14692 - chr3R_15_10800001 chr3R_10800001 KN35_1-HE 2331 chr3R 10804170 10804206 chr3R 10811703 10811739 17.6 14 7533 3.5 1.5 2.5 4.0 7569 chr3R 10804170 intergenic CG14692 - chr3R 10807954 intergenic not near genes chr3R 10811739 3` UTR CG14693 - chr3R_14_10805001 chr3R_10805001 KN35_1-HE 2332 chr3R 10817218 10817248 chr3R 10817302 10817332 18 84 4.0 4.5 4.2 3.5 114 chr3R 10817218 3` UTR CG4089 + chr3R 10817275 3` UTR CG4089 + chr3R 10817332 3` UTR CG4089 + chr3R_18_10815001 chr3R_10815001 KN35_1-HE 2333 chr3R 10833715 10833751 chr3R 10833810 10833846 26 95 5.5 8.0 6.8 3.3 131 chr3R 10833715 intron Cad86C + chr3R 10833780 intron Cad86C + chr3R 10833846 intron Cad86C + chr3R_26_10830001 chr3R_10830001 KN35_1-HE 2334 chr3R 10886872 10886899 chr3R 10886953 10886980 10 81 6.5 1.5 4.0 2.0 108 chr3R 10886872 intron Leash + chr3R 10886926 intron Leash + chr3R 10886980 intron Leash + chr3R_10_10885001 chr3R_10885001 KN35_1-HE 2335 chr3R 10937847 10937858 chr3R 10937934 10937945 6 87 8.0 0.0 4.0 1.2 98 chr3R 10937847 intergenic not near genes chr3R 10937896 intergenic not near genes chr3R 10937945 intergenic not near genes chr3R_6_10935001 chr3R_10935001 KN35_1-HE 2336 chr3R 10957867 10957885 chr3R 10963253 10963271 Rt1c 4 5386 7.5 3.5 5.5 0.6 5404 chr3R 10957867 intergenic not near genes chr3R 10960569 intergenic not near genes chr3R 10963271 intergenic not near genes chr3R_4_10960001 chr3R_10960001 KN35_1-HE 2337 chr3R 11030447 11030468 chr3R 11030716 11030737 14 269 40.0 53.0 46.5 0.3 290 chr3R 11030447 intron CG34114 + chr3R 11030592 intron CG34114 + chr3R 11030737 intron CG34114 + chr3R_14_11030001 chr3R_11030001 KN35_1-HE 2338 chr3R 11056893 11056908 chr3R 11056972 11056987 11 79 5.0 0.0 2.5 3.1 94 chr3R 11056893 intergenic not near genes chr3R 11056940 intergenic not near genes chr3R 11056987 intergenic not near genes chr3R_11_11055001 chr3R_11055001 KN35_1-HE 2339 chr3R 11065584 11065609 chr3R 11071241 11071266 297 7 5657 6.5 8.5 7.5 0.8 5682 chr3R 11065584 intergenic not near genes chr3R 11068425 intergenic not near genes chr3R 11071266 intergenic not near genes chr3R_7_11065001 chr3R_11065001 KN35_1-HE 2340 chr3R 11085460 11085618 chr3R 11085538 11085708 28 83 4.5 6.0 5.2 4.5 248 chr3R 11085460 3` UTR CR44940 - chr3R 11085584 intergenic CR44940 - chr3R 11085708 intergenic CR44940 - chr3R_28_11085001 chr3R_11085001 KN35_1-HE 2341 chr3R 11103169 11103177 chr3R 11103252 11103260 6 83 6.5 0.0 3.2 1.4 91 chr3R 11103169 intergenic not near genes chr3R 11103214 intergenic not near genes chr3R 11103260 intergenic not near genes chr3R_6_11100001 chr3R_11100001 KN35_1-HE 2342 chr3R 11131068 11131103 chr3R 11131180 11131215 14 112 4.5 3.0 3.8 2.9 147 chr3R 11131068 intergenic not near genes chr3R 11131142 intergenic not near genes chr3R 11131215 intergenic not near genes chr3R_14_11130001 chr3R_11130001 KN35_1-HE 2343 chr3R 11151810 11151832 chr3R 11151903 11151925 8 93 4.5 5.0 4.8 1.4 115 chr3R 11151810 3` UTR Ugt86Di - chr3R 11151868 3` UTR Ugt86Di - chr3R 11151925 3` UTR Ugt86Di - chr3R_8_11150001 chr3R_11150001 KN35_1-HE 2344 chr3R 11154355 11154387 chr3R 11154790 11154822 14 435 1.5 6.5 4.0 2.8 467 chr3R 11154355 intergenic Ugt86Dc + chr3R 11154588 intergenic Ugt86Dc + chr3R 11154822 exon Ugt86Dc + chr3R_14_11150001 chr3R_11150001 KN35_1-HE 2345 chr3R 11174605 11174617 chr3R 11175320 11175332 5 715 15.5 20.5 18.0 0.3 727 chr3R 11174605 exon Ugt86Dj - chr3R 11174968 intron Ugt86Dj - chr3R 11175332 exon Ugt86Dj - chr3R_5_11170001 chr3R_11170001 KN35_1-HE 2346 chr3R 11269446 11269478 chr3R 11269572 11269604 10 126 6.0 1.0 3.5 2.2 158 chr3R 11269446 3` UTR CR31386 - chr3R 11269525 3` UTR CR31386 - chr3R 11269604 3` UTR CR31386 - chr3R_10_11265001 chr3R_11265001 KN35_1-HE 2347 chr3R 11277194 11277230 chr3R 11277360 11277396 24 165 6.0 6.0 6.0 3.4 202 chr3R 11277194 intron CR31386 - chr3R 11277295 intron CR31386 - chr3R 11277396 intron CR31386 - chr3R_24_11275001 chr3R_11275001 KN35_1-HE 2348 chr3R 11282384 11282392 chr3R 11282463 11282471 10 79 5.0 10.5 7.8 1.1 87 chr3R 11282384 intron CR31386 - chr3R 11282428 intron CR31386 - chr3R 11282471 intron CR31386 - chr3R_10_11280001 chr3R_11280001 KN35_1-HE 2349 chr3R 11335740 11335775 chr3R 11335826 11335861 30 84 7.5 2.5 5.0 5.0 121 chr3R 11335740 intron pros + chr3R 11335800 intron pros + chr3R 11335861 intron pros + chr3R_30_11335001 chr3R_11335001 KN35_1-HE 2350 chr3R 11379233 11379269 chr3R 11388389 11388425 roo 18 9156 6.5 10.5 8.5 1.9 9192 chr3R 11379233 intron pros + chr3R 11383829 intron pros + chr3R 11388425 intron pros + chr3R_18_11380001 chr3R_11380001 KN35_1-HE 2351 chr3R 11472494 11472522 chr3R 11472596 11472620 10 100 0.5 4.0 2.2 3.1 126 chr3R 11472494 intergenic not near genes chr3R 11472557 intergenic not near genes chr3R 11472620 intergenic not near genes chr3R_10_11470001 chr3R_11470001 KN35_1-HE 2352 chr3R 11473938 11473969 chr3R 11474020 11474051 13 82 2.5 6.0 4.2 2.5 113 chr3R 11473938 intergenic not near genes chr3R 11473994 intergenic not near genes chr3R 11474051 intergenic not near genes chr3R_13_11470001 chr3R_11470001 KN35_1-HE 2353 chr3R 11476949 11476970 chr3R 11477052 11477073 6 103 3.0 4.5 3.8 1.2 124 chr3R 11476949 intergenic not near genes chr3R 11477011 intergenic not near genes chr3R 11477073 intergenic not near genes chr3R_6_11475001 chr3R_11475001 KN35_1-HE 2354 chr3R 11485986 11486011 chr3R 11486067 11486092 11 81 2.0 4.0 3.0 2.8 106 chr3R 11485986 intergenic not near genes chr3R 11486039 intergenic not near genes chr3R 11486092 intergenic not near genes chr3R_11_11485001 chr3R_11485001 KN35_1-HE 2355 chr3R 11563619 11563652 chr3R 11563705 11563738 9 86 4.0 5.5 4.8 1.6 119 chr3R 11563619 intron,intron fabp -,sea - chr3R 11563678 intron,intron fabp -,sea - chr3R 11563738 intron,intron fabp -,sea - chr3R_9_11560001 chr3R_11560001 KN35_1-HE 2356 chr3R 11694723 11694750 chr3R 11694817 11694844 14 94 6.0 7.5 6.8 1.8 121 chr3R 11694723 intergenic Fer3 - chr3R 11694784 intergenic Fer3 - chr3R 11694844 intergenic not near genes chr3R_14_11690001 chr3R_11690001 KN35_1-HE 2357 chr3R 11695738 11695773 chr3R 11695820 11695855 17 82 3.0 5.5 4.2 3.3 117 chr3R 11695738 intergenic not near genes chr3R 11695796 intergenic not near genes chr3R 11695855 intergenic not near genes chr3R_17_11695001 chr3R_11695001 KN35_1-HE 2358 chr3R 11710204 11710232 chr3R 11710283 11710311 16 79 4.5 5.0 4.8 2.8 107 chr3R 11710204 intergenic not near genes chr3R 11710258 intergenic not near genes chr3R 11710311 intergenic not near genes chr3R_16_11710001 chr3R_11710001 KN35_1-HE 2359 chr3R 11728175 11728205 chr3R 11728257 11728282 9 81 2.0 4.5 3.2 2.1 107 chr3R 11728175 intron CG12594 + chr3R 11728228 intron CG12594 + chr3R 11728282 intron CG12594 + chr3R_9_11725001 chr3R_11725001 KN35_1-HE 2360 chr3R 11733158 11733194 chr3R 11733304 11733340 9 146 1.5 3.5 2.5 2.6 182 chr3R 11733158 intergenic not near genes chr3R 11733249 intergenic not near genes chr3R 11733340 intergenic not near genes chr3R_9_11730001 chr3R_11730001 KN35_1-HE 2361 chr3R 11738345 11738367 chr3R 11742104 11742126 7 3760 26.0 9.0 17.5 0.4 3781 chr3R 11738345 exon Blm - chr3R 11740236 exon Blm - chr3R 11742126 5` UTR CG14722 + chr3R_7_11740001 chr3R_11740001 KN35_1-HE 2362 chr3R 11830989 11831000 chr3R 11831120 11831131 7 131 7.0 6.0 6.5 0.9 142 chr3R 11830989 intron CG6959 - chr3R 11831060 intron CG6959 - chr3R 11831131 intron CG6959 - chr3R_7_11830001 chr3R_11830001 KN35_1-HE 2363 chr3R 11841058 11841097 chr3R 11846250 11846289 BS 20 5192 6.5 5.5 6.0 2.9 5231 chr3R 11841058 intron CG6959 - chr3R 11843674 intron CG6959 - chr3R 11846289 intron CG6959 - chr3R_20_11840001 chr3R_11840001 KN35_1-HE 2364 chr3R 11851585 11851594 chr3R 11851664 11851673 4 79 14.0 9.0 11.5 0.3 88 chr3R 11851585 intron CG6959 - chr3R 11851629 intron CG6959 - chr3R 11851673 intron CG6959 - chr3R_4_11850001 chr3R_11850001 KN35_1-HE 2365 chr3R 11949343 11949370 chr3R 11949434 11949461 5 91 2.0 3.5 2.8 1.3 118 chr3R 11949343 intergenic Cad87A -,CG31211 + chr3R 11949402 intergenic Cad87A -,CG31211 + chr3R 11949461 intergenic CG31211 +,Cad87A - chr3R_5_11945001 chr3R_11945001 KN35_1-HE 2366 chr3R 11987697 11987728 chr3R 11987782 11987813 12 85 5.0 3.0 4.0 2.4 116 chr3R 11987697 intron mfas - chr3R 11987755 intron mfas - chr3R 11987813 intron mfas - chr3R_12_11985001 chr3R_11985001 KN35_1-HE 2367 chr3R 12022882 12022911 chr3R 12025060 12025089 pogo 8 2178 4.5 7.0 5.8 1.2 2207 chr3R 12022882 intergenic not near genes chr3R 12023986 intergenic not near genes chr3R 12025089 intergenic not near genes chr3R_8_12020001 chr3R_12020001 KN35_1-HE 2368 chr3R 12051871 12051904 chr3R 12051949 12051982 11 78 5.0 4.5 4.8 1.9 111 chr3R 12051871 intergenic not near genes chr3R 12051926 intergenic not near genes chr3R 12051982 intergenic not near genes chr3R_11_12050001 chr3R_12050001 KN35_1-HE 2369 chr3R 12065874 12065907 chr3R 12065978 12066011 16 104 3.5 5.5 4.5 2.9 137 chr3R 12065874 intergenic not near genes chr3R 12065942 intergenic not near genes chr3R 12066011 intergenic not near genes chr3R_16_12065001 chr3R_12065001 KN35_1-HE 2370 chr3R 12088085 12088115 chr3R 12088174 12088204 14 89 0.0 1.5 0.8 7.8 119 chr3R 12088085 intron CG14741 - chr3R 12088144 intron CG14741 - chr3R 12088204 intron CG14741 - chr3R_14_12085001 chr3R_12085001 KN35_1-HE 2371 chr3R 12165862 12165896 chr3R 12165941 12165975 21 79 5.5 5.5 5.5 3.2 113 chr3R 12165862 intron Cpn - chr3R 12165918 intron Cpn - chr3R 12165975 intron Cpn - chr3R_21_12165001 chr3R_12165001 KN35_1-HE 2372 chr3R 12214343 12214371 chr3R 12214435 12214463 13 92 1.5 4.0 2.8 3.4 120 chr3R 12214343 3` UTR CG4848 - chr3R 12214403 3` UTR CG4848 - chr3R 12214463 3` UTR CG4848 - chr3R_13_12210001 chr3R_12210001 KN35_1-HE 2373 chr3R 12240646 12240676 chr3R 12240741 12240771 8 93 4.0 0.5 2.2 2.5 125 chr3R 12240646 intergenic CR44036 + chr3R 12240708 intergenic CR44036 + chr3R 12240771 intergenic CR44036 + chr3R_8_12240001 chr3R_12240001 KN35_1-HE 2374 chr3R 12247141 12247174 chr3R 12247227 12247260 14 86 3.5 3.5 3.5 3.1 119 chr3R 12247141 intergenic not near genes chr3R 12247200 intergenic not near genes chr3R 12247260 intergenic not near genes chr3R_14_12245001 chr3R_12245001 KN35_1-HE 2375 chr3R 12267855 12267889 chr3R 12267936 12267970 9 81 2.5 3.5 3.0 2.2 115 chr3R 12267855 intron svp + chr3R 12267912 intron svp + chr3R 12267970 intron svp + chr3R_9_12265001 chr3R_12265001 KN35_1-HE 2376 chr3R 12287334 12287371 chr3R 12287420 12287457 15 86 3.0 3.0 3.0 3.8 123 chr3R 12287334 intron svp + chr3R 12287396 intron svp + chr3R 12287457 intron svp + chr3R_15_12285001 chr3R_12285001 KN35_1-HE 2377 chr3R 12316422 12316455 chr3R 12316514 12316547 13 92 4.5 5.0 4.8 2.2 125 chr3R 12316422 intergenic not near genes chr3R 12316484 intergenic not near genes chr3R 12316547 intergenic not near genes chr3R_13_12315001 chr3R_12315001 KN35_1-HE 2378 chr3R 12350062 12350096 chr3R 12350152 12350185 7 90 2.5 2.0 2.2 2.2 123 chr3R 12350062 intron CG10038 - chr3R 12350124 intron CG10038 - chr3R 12350185 intron CG10038 - chr3R_7_12350001 chr3R_12350001 KN35_1-HE 2379 chr3R 12379282 12379293 chr3R 12379364 12379375 6 82 3.5 4.0 3.8 1.2 93 chr3R 12379282 intergenic GstD7 + chr3R 12379328 intergenic GstD7 + chr3R 12379375 intergenic GstD7 + chr3R_6_12375001 chr3R_12375001 KN35_1-HE 2380 chr3R 12385095 12385111 chr3R 12385176 12385192 5 81 3.5 5.5 4.5 0.9 97 chr3R 12385095 intron GstD11 + chr3R 12385144 intron GstD11 + chr3R 12385192 intron GstD11 + chr3R_5_12385001 chr3R_12385001 KN35_1-HE 2381 chr3R 12450415 12450448 chr3R 12450661 12450691 8 245 1.5 3.0 2.2 2.5 276 chr3R 12450415 intron CG18549 + chr3R 12450553 intron CG18549 + chr3R 12450691 intron CG18549 + chr3R_8_12450001 chr3R_12450001 KN35_1-HE 2382 chr3R 12594259 12594284 chr3R 12594341 12594366 11 82 3.5 3.0 3.2 2.6 107 chr3R 12594259 intergenic Octbeta2R - chr3R 12594312 intergenic Octbeta2R - chr3R 12594366 intergenic Octbeta2R - chr3R_11_12590001 chr3R_12590001 KN35_1-HE 2383 chr3R 12748962 12748995 chr3R 12749056 12749089 14 94 2.5 4.5 3.5 3.1 127 chr3R 12748962 intron beat-Vc - chr3R 12749026 intron beat-Vc - chr3R 12749089 intron beat-Vc - chr3R_14_12745001 chr3R_12745001 KN35_1-HE 2384 chr3R 12864566 12864591 chr3R 12865052 12865077 roo 8 486 2.0 4.0 3.0 2.0 511 chr3R 12864566 intergenic not near genes chr3R 12864822 intergenic not near genes chr3R 12865077 intergenic not near genes chr3R_8_12860001 chr3R_12860001 KN35_1-HE 2385 chr3R 12866486 12866520 chr3R 12866638 12866672 18 152 3.0 5.5 4.2 3.5 186 chr3R 12866486 intergenic not near genes chr3R 12866579 intergenic not near genes chr3R 12866672 intergenic not near genes chr3R_18_12865001 chr3R_12865001 KN35_1-HE 2386 chr3R 12880115 12880151 chr3R 12880192 12880228 16 77 3.5 4.0 3.8 3.3 113 chr3R 12880115 intergenic not near genes chr3R 12880172 intergenic not near genes chr3R 12880228 intergenic not near genes chr3R_16_12880001 chr3R_12880001 KN35_1-HE 2387 chr3R 12920153 12920183 chr3R 12925357 12925384 copia 18 5203 6.0 6.0 6.0 2.6 5231 chr3R 12920153 intron beat-Vb + chr3R 12922768 intron beat-Vb + chr3R 12925384 intron beat-Vb + chr3R_18_12920001 chr3R_12920001 KN35_1-HE 2388 chr3R 12935352 12935370 chr3R 12935457 12935475 6 105 2.0 0.0 1.0 3.0 123 chr3R 12935352 intergenic not near genes chr3R 12935414 intergenic not near genes chr3R 12935475 intergenic not near genes chr3R_6_12935001 chr3R_12935001 KN35_1-HE 2389 chr3R 12948809 12948833 chr3R 12948899 12948923 9 90 3.5 5.5 4.5 1.6 114 chr3R 12948809 intergenic not near genes chr3R 12948866 intergenic not near genes chr3R 12948923 intergenic not near genes chr3R_9_12945001 chr3R_12945001 KN35_1-HE 2390 chr3R 13059964 13059973 chr3R 13060160 13060169 8 196 6.0 5.0 5.5 1.2 205 chr3R 13059964 intron sim + chr3R 13060066 intron sim + chr3R 13060169 intron sim + chr3R_8_13060001 chr3R_13060001 KN35_1-HE 2391 chr3R 13061878 13061899 chr3R 13061974 13061995 8 96 7.0 2.5 4.8 1.4 117 chr3R 13061878 intron sim + chr3R 13061936 intron sim + chr3R 13061995 intron sim + chr3R_8_13060001 chr3R_13060001 KN35_1-HE 2392 chr3R 13064767 13064792 chr3R 13064866 13064891 14 99 1.5 1.0 1.2 6.4 124 chr3R 13064767 intron sim + chr3R 13064829 intron sim + chr3R 13064891 intron sim + chr3R_14_13060001 chr3R_13060001 KN35_1-HE 2393 chr3R 13073288 13073312 chr3R 13073383 13073407 12 95 2.5 3.0 2.8 3.2 119 chr3R 13073288 intron sim + chr3R 13073348 intron sim + chr3R 13073407 intron sim + chr3R_12_13070001 chr3R_13070001 KN35_1-HE 2394 chr3R 13075361 13075383 chr3R 13075443 13075465 11 82 4.0 10.0 7.0 1.4 104 chr3R 13075361 intron sim + chr3R 13075413 intron sim + chr3R 13075465 intron sim + chr3R_11_13075001 chr3R_13075001 KN35_1-HE 2395 chr3R 13143038 13143065 chr3R 13148615 13148642 mdg3 10 5577 4.0 6.0 5.0 1.7 5604 chr3R 13143038 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145840 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148642 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_10_13145001 chr3R_13145001 KN35_1-HE 2396 chr3R 13157676 13157688 chr3R 13157875 13157887 5 199 5.0 6.5 5.8 0.7 211 chr3R 13157676 intron timeout + chr3R 13157782 intron timeout + chr3R 13157887 intron timeout + chr3R_5_13155001 chr3R_13155001 KN35_1-HE 2397 chr3R 13273900 13273930 chr3R 13274074 13274103 10 173 4.5 1.5 3.0 2.5 203 chr3R 13273900 intergenic not near genes chr3R 13274002 intergenic not near genes chr3R 13274103 intergenic not near genes chr3R_10_13270001 chr3R_13270001 KN35_1-HE 2398 chr3R 13274213 13274249 chr3R 13274293 13274329 6 80 3.5 2.5 3.0 1.5 116 chr3R 13274213 intergenic not near genes chr3R 13274271 intergenic not near genes chr3R 13274329 intergenic not near genes chr3R_6_13270001 chr3R_13270001 KN35_1-HE 2399 chr3R 13330280 13330308 chr3R 13330374 13330404 12 95 3.0 4.0 3.5 2.7 124 chr3R 13330280 exon PK2-R2 - chr3R 13330342 intron PK2-R2 - chr3R 13330404 intron PK2-R2 - chr3R_12_13330001 chr3R_13330001 KN35_1-HE 2400 chr3R 13349047 13349081 chr3R 13349134 13349168 12 87 6.5 2.5 4.5 2.2 121 chr3R 13349047 intergenic not near genes chr3R 13349108 intergenic not near genes chr3R 13349168 intergenic not near genes chr3R_12_13345001 chr3R_13345001 KN35_1-HE 2401 chr3R 13441497 13441536 chr3R 13441577 13441616 28 80 5.5 4.5 5.0 4.7 119 chr3R 13441497 intergenic not near genes chr3R 13441556 intergenic not near genes chr3R 13441616 intergenic not near genes chr3R_28_13440001 chr3R_13440001 KN35_1-HE 2402 chr3R 13444468 13444489 chr3R 13444552 13444573 8 84 4.5 3.5 4.0 1.6 105 chr3R 13444468 intergenic CR45679 - chr3R 13444520 intergenic CR45679 - chr3R 13444573 intergenic CR45679 - chr3R_8_13440001 chr3R_13440001 KN35_1-HE 2403 chr3R 13491229 13491236 chr3R 13491306 13491313 8 77 8.0 0.0 4.0 1.6 84 chr3R 13491229 intergenic not near genes chr3R 13491271 intergenic not near genes chr3R 13491313 intergenic not near genes chr3R_8_13490001 chr3R_13490001 KN35_1-HE 2404 chr3R 13517229 13517258 chr3R 13520050 13520080 jockey 8 2821 2.5 4.5 3.5 1.8 2851 chr3R 13517229 intergenic not near genes chr3R 13518654 intergenic not near genes chr3R 13520080 intergenic not near genes chr3R_8_13515001 chr3R_13515001 KN35_1-HE 2405 chr3R 13555685 13555704 chr3R 13555764 13555783 11 79 6.5 0.0 3.2 2.6 98 chr3R 13555685 intergenic not near genes chr3R 13555734 intergenic not near genes chr3R 13555783 intergenic not near genes chr3R_11_13555001 chr3R_13555001 KN35_1-HE 2406 chr3R 13573702 13573737 chr3R 13573874 13573899 20 172 5.0 6.0 5.5 3.1 197 chr3R 13573702 intergenic not near genes chr3R 13573800 intergenic not near genes chr3R 13573899 intergenic not near genes chr3R_20_13570001 chr3R_13570001 KN35_1-HE 2407 chr3R 13603055 13603077 chr3R 13603147 13603169 12 92 2.5 3.0 2.8 3.2 114 chr3R 13603055 intergenic not near genes chr3R 13603112 intergenic not near genes chr3R 13603169 intergenic not near genes chr3R_12_13600001 chr3R_13600001 KN35_1-HE 2408 chr3R 13629015 13629046 chr3R 13629104 13629123 8 88 3.0 4.5 3.8 1.7 108 chr3R 13629015 intergenic not near genes chr3R 13629069 intergenic not near genes chr3R 13629123 intergenic not near genes chr3R_8_13625001 chr3R_13625001 KN35_1-HE 2409 chr3R 13659727 13659848 chr3R 13659833 13659938 5 97 0.0 0.0 0.0 5.0 211 chr3R 13659727 intron Hrb87F - chr3R 13659832 intron Hrb87F - chr3R 13659938 intron Hrb87F - chr3R_5_13655001 chr3R_13655001 KN35_1-HE 2410 chr3R 13672938 13672977 chr3R 13673017 13673056 20 79 2.5 5.0 3.8 4.2 118 chr3R 13672938 intron Task6 - chr3R 13672997 intron Task6 - chr3R 13673056 intron Task6 - chr3R_20_13670001 chr3R_13670001 KN35_1-HE 2411 chr3R 13721880 13721914 chr3R 13721960 13721994 18 80 4.0 6.0 5.0 3.0 114 chr3R 13721880 intron CG34383 + chr3R 13721937 intron CG34383 + chr3R 13721994 intron CG34383 + chr3R_18_13720001 chr3R_13720001 KN35_1-HE 2412 chr3R 13804883 13804887 chr3R 13804969 13804973 5 86 2.0 12.5 7.2 0.6 90 chr3R 13804883 intergenic not near genes chr3R 13804928 intergenic not near genes chr3R 13804973 intergenic not near genes chr3R_5_13800001 chr3R_13800001 KN35_1-HE 2413 chr3R 13816362 13816381 chr3R 13816443 13816462 11 81 4.5 8.0 6.2 1.5 100 chr3R 13816362 5` UTR CR43642 + chr3R 13816412 5` UTR CR43642 + chr3R 13816462 5` UTR CR43642 + chr3R_11_13815001 chr3R_13815001 KN35_1-HE 2414 chr3R 13828847 13828873 chr3R 13828934 13828960 10 87 3.5 0.0 1.8 3.6 113 chr3R 13828847 intergenic CR43300 + chr3R 13828904 intergenic CR43300 + chr3R 13828960 intergenic not near genes chr3R_10_13825001 chr3R_13825001 KN35_1-HE 2415 chr3R 13830751 13830765 chr3R 13830916 13830930 7 165 6.5 4.0 5.2 1.1 179 chr3R 13830751 intergenic not near genes chr3R 13830840 intergenic not near genes chr3R 13830930 intergenic not near genes chr3R_7_13830001 chr3R_13830001 KN35_1-HE 2416 chr3R 13948235 13948256 chr3R 13948315 13948335 8 79 0.5 2.0 1.2 3.6 100 chr3R 13948235 intergenic CG31517 + chr3R 13948285 intergenic CG31517 + chr3R 13948335 intergenic CG31517 + chr3R_8_13945001 chr3R_13945001 KN35_1-HE 2417 chr3R 13975371 13975406 chr3R 13975452 13975487 13 80 6.5 2.5 4.5 2.4 116 chr3R 13975371 intron rdx - chr3R 13975429 intron rdx - chr3R 13975487 intron rdx - chr3R_13_13975001 chr3R_13975001 KN35_1-HE 2418 chr3R 14014271 14014301 chr3R 14014404 14014434 6 133 5.0 0.0 2.5 1.7 163 chr3R 14014271 intron rdx - chr3R 14014352 intron rdx - chr3R 14014434 intron rdx - chr3R_6_14010001 chr3R_14010001 KN35_1-HE 2419 chr3R 14021648 14021680 chr3R 14023466 14023498 S-element 20 1818 3.0 2.0 2.5 5.7 1850 chr3R 14021648 intron rdx - chr3R 14022573 intron rdx - chr3R 14023498 intron rdx - chr3R_20_14020001 chr3R_14020001 KN35_1-HE 2420 chr3R 14047770 14047805 chr3R 14047862 14047896 10 91 0.0 4.0 2.0 3.3 126 chr3R 14047770 intergenic not near genes chr3R 14047833 intergenic not near genes chr3R 14047896 intergenic not near genes chr3R_10_14045001 chr3R_14045001 KN35_1-HE 2421 chr3R 14067141 14067156 chr3R 14067221 14067236 16 80 6.0 3.5 4.8 2.8 95 chr3R 14067141 exon foxo + chr3R 14067188 intron foxo + chr3R 14067236 intron foxo + chr3R_16_14065001 chr3R_14065001 KN35_1-HE 2422 chr3R 14083403 14083437 chr3R 14083505 14083539 27 102 11.5 0.0 5.8 4.0 136 chr3R 14083403 intron foxo + chr3R 14083471 intron foxo + chr3R 14083539 intron foxo + chr3R_27_14080001 chr3R_14080001 KN35_1-HE 2423 chr3R 14096448 14096483 chr3R 14096543 14096578 11 95 3.5 1.5 2.5 3.1 130 chr3R 14096448 intron CCHa1 - chr3R 14096513 intron CCHa1 - chr3R 14096578 intron CCHa1 - chr3R_11_14095001 chr3R_14095001 KN35_1-HE 2424 chr3R 14117442 14117472 chr3R 14117519 14117546 16 77 2.5 6.5 4.5 2.9 104 chr3R 14117442 intron Kif19A - chr3R 14117494 intron Kif19A - chr3R 14117546 intron Kif19A - chr3R_16_14115001 chr3R_14115001 KN35_1-HE 2425 chr3R 14154015 14154039 chr3R 14154098 14154122 10 83 4.5 2.0 3.2 2.4 107 chr3R 14154015 intergenic CG9722 - chr3R 14154068 intergenic CG9722 - chr3R 14154122 intergenic CG9722 - chr3R_10_14150001 chr3R_14150001 KN35_1-HE 2426 chr3R 14169737 14169768 chr3R 14169821 14169852 11 84 0.0 2.5 1.2 5.0 115 chr3R 14169737 3` UTR Dop1R1 - chr3R 14169794 3` UTR Dop1R1 - chr3R 14169852 3` UTR Dop1R1 - chr3R_11_14165001 chr3R_14165001 KN35_1-HE 2427 chr3R 14170150 14170173 chr3R 14170241 14170264 7 91 5.0 3.5 4.2 1.3 114 chr3R 14170150 3` UTR Dop1R1 - chr3R 14170207 3` UTR Dop1R1 - chr3R 14170264 3` UTR Dop1R1 - chr3R_7_14170001 chr3R_14170001 KN35_1-HE 2428 chr3R 14180810 14180836 chr3R 14185576 14185602 F-element 18 4766 7.5 8.5 8.0 2.0 4792 chr3R 14180810 intron Dop1R1 - chr3R 14183206 intron Dop1R1 - chr3R 14185602 intron Dop1R1 - chr3R_18_14180001 chr3R_14180001 KN35_1-HE 2429 chr3R 14229468 14229499 chr3R 14229613 14229644 12 145 1.5 5.0 3.2 2.9 176 chr3R 14229468 intergenic CG9624 - chr3R 14229556 intergenic CG9624 - chr3R 14229644 intergenic CG9624 - chr3R_12_14225001 chr3R_14225001 KN35_1-HE 2430 chr3R 14246395 14246416 chr3R 14247892 14247913 jockey 4 1497 2.5 2.5 2.5 1.1 1518 chr3R 14246395 intergenic not near genes chr3R 14247154 intergenic not near genes chr3R 14247913 intergenic not near genes chr3R_4_14245001 chr3R_14245001 KN35_1-HE 2431 chr3R 14249997 14250031 chr3R 14250075 14250109 15 78 7.0 2.0 4.5 2.7 112 chr3R 14249997 intergenic not near genes chr3R 14250053 intergenic not near genes chr3R 14250109 intergenic not near genes chr3R_15_14250001 chr3R_14250001 KN35_1-HE 2432 chr3R 14278419 14278452 chr3R 14278502 14278535 16 83 3.0 2.5 2.8 4.2 116 chr3R 14278419 intron trx - chr3R 14278477 intron trx - chr3R 14278535 intron trx - chr3R_16_14275001 chr3R_14275001 KN35_1-HE 2433 chr3R 14294038 14294069 chr3R 14294117 14294148 15 79 2.0 7.5 4.8 2.6 110 chr3R 14294038 intron CG12207 + chr3R 14294093 intron CG12207 + chr3R 14294148 intron CG12207 + chr3R_15_14290001 chr3R_14290001 KN35_1-HE 2434 chr3R 14440738 14440755 chr3R 14440815 14440832 5 77 0.5 4.0 2.2 1.6 94 chr3R 14440738 intron cv-c - chr3R 14440785 intron cv-c - chr3R 14440832 intron cv-c - chr3R_5_14440001 chr3R_14440001 KN35_1-HE 2435 chr3R 14458901 14458913 chr3R 14458983 14458995 6 82 0.0 6.0 3.0 1.5 94 chr3R 14458901 intron cv-c - chr3R 14458948 intron cv-c - chr3R 14458995 intron cv-c - chr3R_6_14455001 chr3R_14455001 KN35_1-HE 2436 chr3R 14528125 14528149 chr3R 14528242 14528267 8 118 2.0 3.0 2.5 2.3 142 chr3R 14528125 intron Pde6 - chr3R 14528196 intron Pde6 - chr3R 14528267 intron Pde6 - chr3R_8_14525001 chr3R_14525001 KN35_1-HE 2437 chr3R 14577956 14577990 chr3R 14578073 14578107 9 117 4.5 4.0 4.2 1.7 151 chr3R 14577956 intron stumps + chr3R 14578032 intron stumps + chr3R 14578107 intron stumps + chr3R_9_14575001 chr3R_14575001 KN35_1-HE 2438 chr3R 14662314 14662340 chr3R 14662396 14662422 19 82 3.5 3.5 3.5 4.2 108 chr3R 14662314 exon Rad17 - chr3R 14662368 intron Rad17 - chr3R 14662422 exon Rad17 - chr3R_19_14660001 chr3R_14660001 KN35_1-HE 2439 chr3R 14704381 14704419 chr3R 14704459 14704497 24 78 6.5 6.5 6.5 3.2 116 chr3R 14704381 intron kibra - chr3R 14704439 intron kibra - chr3R 14704497 intron kibra - chr3R_24_14700001 chr3R_14700001 KN35_1-HE 2440 chr3R 14759471 14759491 chr3R 14759556 14759576 11 85 5.0 3.0 4.0 2.2 105 chr3R 14759471 intron jvl + chr3R 14759524 intron jvl + chr3R 14759576 intron jvl + chr3R_11_14755001 chr3R_14755001 KN35_1-HE 2441 chr3R 14779065 14779097 chr3R 14779146 14779178 8 80 4.0 5.0 4.5 1.5 113 chr3R 14779065 intron jvl + chr3R 14779122 intron jvl + chr3R 14779178 intron jvl + chr3R_8_14775001 chr3R_14775001 KN35_1-HE 2442 chr3R 14882812 14882839 chr3R 14882895 14882922 13 83 1.5 3.5 2.5 3.7 110 chr3R 14882812 intron Rrp6 - chr3R 14882867 intron Rrp6 - chr3R 14882922 exon Rrp6 - chr3R_13_14880001 chr3R_14880001 KN35_1-HE 2443 chr3R 14943818 14943845 chr3R 14943901 14943902 22 82 3.5 7.0 5.2 3.5 84 chr3R 14943818 intergenic not near genes chr3R 14943860 intergenic not near genes chr3R 14943902 intergenic not near genes chr3R_22_14940001 chr3R_14940001 KN35_1-HE 2444 chr3R 14954162 14954173 chr3R 14954308 14954319 9 146 3.0 4.0 3.5 2.0 157 chr3R 14954162 intergenic not near genes chr3R 14954240 intergenic not near genes chr3R 14954319 intergenic not near genes chr3R_9_14950001 chr3R_14950001 KN35_1-HE 2445 chr3R 14955150 14955182 chr3R 14955241 14955273 10 91 2.5 7.5 5.0 1.7 123 chr3R 14955150 intergenic not near genes chr3R 14955212 intergenic not near genes chr3R 14955273 intergenic not near genes chr3R_10_14955001 chr3R_14955001 KN35_1-HE 2446 chr3R 14971346 14971378 chr3R 14971433 14971466 15 88 4.5 2.0 3.2 3.6 120 chr3R 14971346 intergenic not near genes chr3R 14971406 intergenic not near genes chr3R 14971466 intergenic not near genes chr3R_15_14970001 chr3R_14970001 KN35_1-HE 2447 chr3R 15026499 15026515 chr3R 15026563 15026596 7 79 6.5 2.0 4.2 1.3 97 chr3R 15026499 intergenic not near genes chr3R 15026548 intergenic not near genes chr3R 15026596 intergenic not near genes chr3R_7_15025001 chr3R_15025001 KN35_1-HE 2448 chr3R 15041420 15041459 chr3R 15045189 15045228 Doc 16 3769 3.0 7.0 5.0 2.7 3808 chr3R 15041420 intergenic not near genes chr3R 15043324 intergenic not near genes chr3R 15045228 intergenic not near genes chr3R_16_15040001 chr3R_15040001 KN35_1-HE 2449 chr3R 15075970 15075987 chr3R 15076057 15076074 9 87 6.5 2.0 4.2 1.7 104 chr3R 15075970 intron dpr9 - chr3R 15076022 intron dpr9 - chr3R 15076074 intron dpr9 - chr3R_9_15075001 chr3R_15075001 KN35_1-HE 2450 chr3R 15076656 15076688 chr3R 15076741 15076773 6 85 2.0 2.0 2.0 2.0 117 chr3R 15076656 intron dpr9 - chr3R 15076714 intron dpr9 - chr3R 15076773 intron dpr9 - chr3R_6_15075001 chr3R_15075001 KN35_1-HE 2451 chr3R 15079815 15079839 chr3R 15080057 15080081 pogo 10 242 2.5 8.0 5.2 1.6 266 chr3R 15079815 3` UTR CG6966 - chr3R 15079948 3` UTR CG6966 - chr3R 15080081 3` UTR CG6966 - chr3R_10_15075001 chr3R_15075001 KN35_1-HE 2452 chr3R 15102494 15102531 chr3R 15109751 15109787 412 11 7256 5.5 3.5 4.5 2.0 7293 chr3R 15102494 intron CG42788 - chr3R 15106140 intron CG42788 - chr3R 15109787 intron CG42788 - chr3R_11_15105001 chr3R_15105001 KN35_1-HE 2453 chr3R 15114918 15114948 chr3R 15114996 15115026 17 78 1.5 5.0 3.2 4.0 108 chr3R 15114918 intron CG42788 - chr3R 15114972 intron CG42788 - chr3R 15115026 intron CG42788 - chr3R_17_15110001 chr3R_15110001 KN35_1-HE 2454 chr3R 15115317 15115347 chr3R 15115462 15115492 21 145 8.5 4.0 6.2 2.9 175 chr3R 15115317 intron CG42788 - chr3R 15115404 intron CG42788 - chr3R 15115492 intron CG42788 - chr3R_21_15115001 chr3R_15115001 KN35_1-HE 2455 chr3R 15126491 15126512 chr3R 15126589 15126616 10 103 5.5 7.0 6.2 1.4 125 chr3R 15126491 intron CG42788 - chr3R 15126554 intron CG42788 - chr3R 15126616 intron CG42788 - chr3R_10_15125001 chr3R_15125001 KN35_1-HE 2456 chr3R 15127780 15127810 chr3R 15127861 15127891 15 81 0.0 2.0 1.0 7.5 111 chr3R 15127780 intron CG42788 - chr3R 15127836 intron CG42788 - chr3R 15127891 intron CG42788 - chr3R_15_15125001 chr3R_15125001 KN35_1-HE 2457 chr3R 15130250 15130284 chr3R 15130393 15130427 33 142 12.5 7.0 9.8 3.1 177 chr3R 15130250 intron CG42788 - chr3R 15130338 intron CG42788 - chr3R 15130427 intron CG42788 - chr3R_33_15130001 chr3R_15130001 KN35_1-HE 2458 chr3R 15132058 15132083 chr3R 15135119 15135144 Juan 18 3061 12.0 15.0 13.5 1.2 3086 chr3R 15132058 intergenic CG42788 - chr3R 15133601 intergenic not near genes chr3R 15135144 3` UTR CG6912 - chr3R_18_15130001 chr3R_15130001 KN35_1-HE 2459 chr3R 15159319 15159356 chr3R 15159403 15159440 13 84 4.5 2.5 3.5 2.9 121 chr3R 15159319 intron Gyc88E + chr3R 15159380 intron Gyc88E + chr3R 15159440 intron Gyc88E + chr3R_13_15155001 chr3R_15155001 KN35_1-HE 2460 chr3R 15162539 15162558 chr3R 15167308 15167327 F-element 8 4768 10.5 0.0 5.2 1.3 4788 chr3R 15162539 intron Gyc88E + chr3R 15164933 intron Gyc88E + chr3R 15167327 intron Gyc88E + chr3R_8_15160001 chr3R_15160001 KN35_1-HE 2461 chr3R 15167804 15167838 chr3R 15167962 15167996 10 158 3.0 2.5 2.8 2.6 192 chr3R 15167804 intron Gyc88E + chr3R 15167900 intron Gyc88E + chr3R 15167996 intron Gyc88E + chr3R_10_15165001 chr3R_15165001 KN35_1-HE 2462 chr3R 15257559 15257592 chr3R 15257639 15257672 12 80 0.5 2.0 1.2 5.5 113 chr3R 15257559 3` UTR CG42404 + chr3R 15257616 3` UTR CG42404 + chr3R 15257672 3` UTR CG42404 + chr3R_12_15255001 chr3R_15255001 KN35_1-HE 2463 chr3R 15376161 15376196 chr3R 15376242 15376277 22 81 8.0 5.0 6.5 2.9 116 chr3R 15376161 intron Rbp + chr3R 15376219 intron Rbp + chr3R 15376277 intron Rbp + chr3R_22_15375001 chr3R_15375001 KN35_1-HE 2464 chr3R 15376606 15376640 chr3R 15377105 15377139 21 502 32.0 35.0 33.5 0.6 533 chr3R 15376606 intron Rbp + chr3R 15376872 intron Rbp + chr3R 15377139 intron Rbp + chr3R_21_15375001 chr3R_15375001 KN35_1-HE 2465 chr3R 15433164 15433181 chr3R 15433252 15433269 9 88 6.5 3.0 4.8 1.6 105 chr3R 15433164 intron CG6118 - chr3R 15433216 intron CG6118 - chr3R 15433269 intron CG6118 - chr3R_9_15430001 chr3R_15430001 KN35_1-HE 2466 chr3R 15435862 15435900 chr3R 15435946 15435980 4 83 1.5 2.0 1.8 1.4 118 chr3R 15435862 intergenic not near genes chr3R 15435921 intergenic not near genes chr3R 15435980 intergenic not near genes chr3R_4_15435001 chr3R_15435001 KN35_1-HE 2467 chr3R 15541956 15541986 chr3R 15542171 15542201 11 210 6.5 3.0 4.8 1.9 245 chr3R 15541956 exon CG18519 - chr3R 15542078 intron CG18519 - chr3R 15542201 exon CG18519 - chr3R_11_15540001 chr3R_15540001 KN35_1-HE 2468 chr3R 15601162 15601195 chr3R 15608685 15608718 412 22 7523 7.0 9.5 8.2 2.4 7556 chr3R 15601162 intergenic not near genes chr3R 15604940 intergenic not near genes chr3R 15608718 intergenic not near genes chr3R_22_15600001 chr3R_15600001 KN35_1-HE 2469 chr3R 15618749 15618763 chr3R 15626224 15626238 blood 7 7475 0.5 10.0 5.2 1.1 7489 chr3R 15618749 intergenic not near genes chr3R 15622494 intergenic not near genes chr3R 15626238 intergenic not near genes chr3R_7_15620001 chr3R_15620001 KN35_1-HE 2470 chr3R 15635231 15635238 chr3R 15635344 15635351 6 113 0.0 9.0 4.5 1.1 120 chr3R 15635231 intergenic CG43335 + chr3R 15635291 intergenic CG43335 + chr3R 15635351 intergenic CG43335 + chr3R_6_15635001 chr3R_15635001 KN35_1-HE 2471 chr3R 15747301 15747328 chr3R 15748340 15748368 7 1039 2.5 13.5 8.0 0.8 1067 chr3R 15747301 intergenic not near genes chr3R 15747834 intergenic not near genes chr3R 15748368 intergenic not near genes chr3R_7_15745001 chr3R_15745001 KN35_1-HE 2472 chr3R 15747712 15747745 chr3R 15748631 15748666 5 920 6.0 21.5 13.8 0.3 954 chr3R 15747712 intergenic not near genes chr3R 15748189 intergenic not near genes chr3R 15748666 intergenic not near genes chr3R_5_15745001 chr3R_15745001 KN35_1-HE 2473 chr3R 15937422 15937448 chr3R 15937510 15937536 9 87 8.0 7.5 7.8 1.0 114 chr3R 15937422 intron Sap47 + chr3R 15937479 intron Sap47 + chr3R 15937536 intron Sap47 + chr3R_9_15935001 chr3R_15935001 KN35_1-HE 2474 chr3R 16013131 16013158 chr3R 16013220 16013247 11 89 4.0 6.5 5.2 1.8 116 chr3R 16013131 intron GATAe + chr3R 16013189 intron GATAe + chr3R 16013247 intron GATAe + chr3R_11_16010001 chr3R_16010001 KN35_1-HE 2475 chr3R 16021730 16021737 chr3R 16021819 16021826 5 89 5.5 3.5 4.5 0.9 96 chr3R 16021730 intergenic not near genes chr3R 16021778 intergenic not near genes chr3R 16021826 intergenic not near genes chr3R_5_16020001 chr3R_16020001 KN35_1-HE 2476 chr3R 16037780 16037806 chr3R 16037873 16037899 6 93 3.5 1.5 2.5 1.7 119 chr3R 16037780 intron pnr + chr3R 16037840 intron pnr + chr3R 16037899 intron pnr + chr3R_6_16035001 chr3R_16035001 KN35_1-HE 2477 chr3R 16154548 16154567 chr3R 16154637 16154657 7 88 6.0 2.5 4.2 1.3 109 chr3R 16154548 intergenic CG6006 + chr3R 16154602 intergenic CG6006 + chr3R 16154657 intergenic CG6006 + chr3R_7_16150001 chr3R_16150001 KN35_1-HE 2478 chr3R 16159768 16159774 chr3R 16159853 16159859 6 85 9.5 5.5 7.5 0.7 91 chr3R 16159768 intron CG6006 + chr3R 16159814 intron CG6006 + chr3R 16159859 intron CG6006 + chr3R_6_16155001 chr3R_16155001 KN35_1-HE 2479 chr3R 16167814 16167842 chr3R 16167903 16167931 14 89 7.5 6.5 7.0 1.8 117 chr3R 16167814 intron CG6006 + chr3R 16167872 intron CG6006 + chr3R 16167931 intron CG6006 + chr3R_14_16165001 chr3R_16165001 KN35_1-HE 2480 chr3R 16189408 16189442 chr3R 16189811 16189846 invader4 20 404 2.5 0.5 1.5 8.0 438 chr3R 16189408 intron sra + chr3R 16189627 intron sra + chr3R 16189846 intron sra + chr3R_20_16185001 chr3R_16185001 KN35_1-HE 2481 chr3R 16213845 16213879 chr3R 16213927 16213961 8 82 1.5 3.5 2.5 2.3 116 chr3R 16213845 intergenic CR45642 +,CR45641 + chr3R 16213903 intergenic CR45642 +,CR45641 + chr3R 16213961 intergenic CR45642 +,CR45641 + chr3R_8_16210001 chr3R_16210001 KN35_1-HE 2482 chr3R 16225087 16225119 chr3R 16225173 16225205 7 86 2.0 2.5 2.2 2.2 118 chr3R 16225087 intergenic not near genes chr3R 16225146 intergenic not near genes chr3R 16225205 intergenic tara + chr3R_7_16225001 chr3R_16225001 KN35_1-HE 2483 chr3R 16256583 16256592 chr3R 16256674 16256683 4 91 9.5 0.5 5.0 0.7 100 chr3R 16256583 intron tara + chr3R 16256633 intron tara + chr3R 16256683 intron tara + chr3R_4_16255001 chr3R_16255001 KN35_1-HE 2484 chr3R 16386198 16386228 chr3R 16386280 16386309 17 81 4.0 7.5 5.8 2.5 111 chr3R 16386198 intron ss - chr3R 16386254 intron ss - chr3R 16386309 intron ss - chr3R_17_16385001 chr3R_16385001 KN35_1-HE 2485 chr3R 16472577 16472599 chr3R 16472654 16472676 6 77 7.5 8.0 7.8 0.7 99 chr3R 16472577 intergenic Gyc-89Da + chr3R 16472626 5` UTR Gyc-89Da + chr3R 16472676 5` UTR Gyc-89Da + chr3R_6_16470001 chr3R_16470001 KN35_1-HE 2486 chr3R 16490667 16490698 chr3R 16490748 16490779 8 81 1.5 2.5 2.0 2.7 112 chr3R 16490667 exon Cad89D - chr3R 16490723 exon Cad89D - chr3R 16490779 intron Cad89D - chr3R_8_16490001 chr3R_16490001 KN35_1-HE 2487 chr3R 16495951 16495985 chr3R 16496029 16496063 14 78 2.0 4.5 3.2 3.3 112 chr3R 16495951 intergenic not near genes chr3R 16496007 intergenic not near genes chr3R 16496063 intergenic not near genes chr3R_14_16495001 chr3R_16495001 KN35_1-HE 2488 chr3R 16519927 16519932 chr3R 16520021 16520026 4 94 7.5 4.5 6.0 0.6 99 chr3R 16519927 intron CG42342 + chr3R 16519976 intron CG42342 + chr3R 16520026 intron CG42342 + chr3R_4_16515001 chr3R_16515001 KN35_1-HE 2489 chr3R 16620385 16620403 chr3R 16620526 16620544 7 141 3.5 3.0 3.2 1.7 159 chr3R 16620385 intergenic CG14893 + chr3R 16620464 intergenic CG14893 + chr3R 16620544 intergenic CG14893 + chr3R_7_16620001 chr3R_16620001 KN35_1-HE 2490 chr3R 16667085 16667112 chr3R 16667168 16667195 12 83 1.0 3.5 2.2 3.8 110 chr3R 16667085 intron Ubx - chr3R 16667140 intron Ubx - chr3R 16667195 intron Ubx - chr3R_12_16665001 chr3R_16665001 KN35_1-HE 2491 chr3R 16671242 16671262 chr3R 16671322 16671342 10 80 3.0 6.0 4.5 1.8 100 chr3R 16671242 intron Ubx - chr3R 16671292 intron Ubx - chr3R 16671342 intron Ubx - chr3R_10_16670001 chr3R_16670001 KN35_1-HE 2492 chr3R 16732147 16732179 chr3R 16732244 16732276 11 97 3.5 7.0 5.2 1.8 129 chr3R 16732147 intron Ubx - chr3R 16732212 intron Ubx - chr3R 16732276 intron Ubx - chr3R_11_16730001 chr3R_16730001 KN35_1-HE 2493 chr3R 16736340 16736374 chr3R 16736418 16736452 10 78 0.0 1.5 0.8 5.6 112 chr3R 16736340 intergenic not near genes chr3R 16736396 intergenic not near genes chr3R 16736452 intergenic not near genes chr3R_10_16735001 chr3R_16735001 KN35_1-HE 2494 chr3R 16756317 16756352 chr3R 16762509 16762544 diver 15 6192 4.0 4.0 4.0 3.0 6227 chr3R 16756317 intron bxd - chr3R 16759430 intron bxd - chr3R 16762544 intron bxd - chr3R_15_16755001 chr3R_16755001 KN35_1-HE 2495 chr3R 16794421 16794457 chr3R 16794515 16794552 7 94 1.0 3.0 2.0 2.3 131 chr3R 16794421 intergenic not near genes chr3R 16794486 intergenic not near genes chr3R 16794552 intergenic not near genes chr3R_7_16790001 chr3R_16790001 KN35_1-HE 2496 chr3R 16856615 16856631 chr3R 16856725 16856741 10 110 3.5 0.0 1.8 3.6 126 chr3R 16856615 intron iab-8 - chr3R 16856678 intron iab-8 - chr3R 16856741 intron iab-8 - chr3R_10_16855001 chr3R_16855001 KN35_1-HE 2497 chr3R 16886358 16886389 chr3R 16886451 16886482 11 93 5.0 3.0 4.0 2.2 124 chr3R 16886358 intron iab-8 - chr3R 16886420 intron iab-8 - chr3R 16886482 intron iab-8 - chr3R_11_16885001 chr3R_16885001 KN35_1-HE 2498 chr3R 16910416 16910445 chr3R 16910496 16910525 12 80 6.0 3.5 4.8 2.1 109 chr3R 16910416 intron iab-8 - chr3R 16910470 intron iab-8 - chr3R 16910525 intron iab-8 - chr3R_12_16910001 chr3R_16910001 KN35_1-HE 2499 chr3R 17054953 17054980 chr3R 17055038 17055064 6 85 4.0 4.0 4.0 1.2 111 chr3R 17054953 intron Dad + chr3R 17055008 intron Dad + chr3R 17055064 5` UTR Dad + chr3R_6_17055001 chr3R_17055001 KN35_1-HE 2500 chr3R 17082096 17082132 chr3R 17082176 17082212 14 80 5.5 5.0 5.2 2.3 116 chr3R 17082096 intron kuk + chr3R 17082154 intron kuk + chr3R 17082212 intron kuk + chr3R_14_17080001 chr3R_17080001 KN35_1-HE 2501 chr3R 17120643 17120670 chr3R 17120791 17120818 9 148 8.0 5.5 6.8 1.2 175 chr3R 17120643 intron,exon cher -,CG34278 + chr3R 17120730 intron,exon cher -,CG34278 + chr3R 17120818 intron cher - chr3R_9_17120001 chr3R_17120001 KN35_1-HE 2502 chr3R 17209704 17209720 chr3R 17209793 17209809 4 89 7.5 11.5 9.5 0.4 105 chr3R 17209704 intergenic not near genes chr3R 17209756 intergenic not near genes chr3R 17209809 intergenic not near genes chr3R_4_17205001 chr3R_17205001 KN35_1-HE 2503 chr3R 17210626 17210658 chr3R 17210743 17210775 18 117 2.5 4.5 3.5 4.0 149 chr3R 17210626 intergenic not near genes chr3R 17210700 intergenic not near genes chr3R 17210775 intergenic not near genes chr3R_18_17210001 chr3R_17210001 KN35_1-HE 2504 chr3R 17215017 17215049 chr3R 17215115 17215146 5 98 5.5 0.0 2.8 1.3 129 chr3R 17215017 intergenic not near genes chr3R 17215082 intergenic not near genes chr3R 17215146 intergenic not near genes chr3R_5_17215001 chr3R_17215001 KN35_1-HE 2505 chr3R 17225523 17225555 chr3R 17225607 17225639 7 84 2.0 2.0 2.0 2.3 116 chr3R 17225523 intergenic not near genes chr3R 17225581 intergenic not near genes chr3R 17225639 intergenic not near genes chr3R_7_17225001 chr3R_17225001 KN35_1-HE 2506 chr3R 17228288 17228318 chr3R 17228369 17228393 12 80 4.0 4.0 4.0 2.4 105 chr3R 17228288 intergenic not near genes chr3R 17228340 intergenic not near genes chr3R 17228393 intergenic not near genes chr3R_12_17225001 chr3R_17225001 KN35_1-HE 2507 chr3R 17266877 17266899 chr3R 17266983 17267005 9 106 0.0 3.5 1.8 3.2 128 chr3R 17266877 intergenic not near genes chr3R 17266941 intergenic not near genes chr3R 17267005 intergenic not near genes chr3R_9_17265001 chr3R_17265001 KN35_1-HE 2508 chr3R 17275990 17276021 chr3R 17276092 17276123 11 102 3.5 0.0 1.8 3.9 133 chr3R 17275990 intergenic not near genes chr3R 17276056 intergenic not near genes chr3R 17276123 intergenic not near genes chr3R_11_17275001 chr3R_17275001 KN35_1-HE 2509 chr3R 17290441 17290474 chr3R 17290528 17290561 23 87 4.0 3.0 3.5 5.1 120 chr3R 17290441 intergenic not near genes chr3R 17290501 intergenic not near genes chr3R 17290561 intergenic not near genes chr3R_23_17290001 chr3R_17290001 KN35_1-HE 2510 chr3R 17294668 17294700 chr3R 17295097 17295129 BS 8 429 4.0 2.0 3.0 2.0 461 chr3R 17294668 intergenic not near genes chr3R 17294898 intergenic not near genes chr3R 17295129 intergenic not near genes chr3R_8_17290001 chr3R_17290001 KN35_1-HE 2511 chr3R 17336134 17336165 chr3R 17336222 17336253 27 87 6.5 5.0 5.8 4.0 119 chr3R 17336134 intron beat-IIa - chr3R 17336194 intron beat-IIa - chr3R 17336253 intron beat-IIa - chr3R_27_17335001 chr3R_17335001 KN35_1-HE 2512 chr3R 17346686 17346717 chr3R 17348250 17348281 F-element 14 1564 4.5 7.0 5.8 2.1 1595 chr3R 17346686 intron beat-IIa - chr3R 17347484 intron beat-IIa - chr3R 17348281 intron beat-IIa - chr3R_14_17345001 chr3R_17345001 KN35_1-HE 2513 chr3R 17355491 17355521 chr3R 17355570 17355600 16 78 3.0 7.5 5.2 2.6 109 chr3R 17355491 intron beat-IIa - chr3R 17355546 intron beat-IIa - chr3R 17355600 intron beat-IIa - chr3R_16_17355001 chr3R_17355001 KN35_1-HE 2514 chr3R 17498775 17498793 chr3R 17498853 17498871 11 78 11.5 9.5 10.5 1.0 96 chr3R 17498775 intron Dscam3 - chr3R 17498823 intron Dscam3 - chr3R 17498871 intron Dscam3 - chr3R_11_17495001 chr3R_17495001 KN35_1-HE 2515 chr3R 17522213 17522229 chr3R 17522307 17522323 6 94 3.0 0.0 1.5 2.4 110 chr3R 17522213 intergenic not near genes chr3R 17522268 intergenic not near genes chr3R 17522323 intergenic not near genes chr3R_6_17520001 chr3R_17520001 KN35_1-HE 2516 chr3R 17530192 17530194 chr3R 17530287 17530289 4 95 10.0 5.5 7.8 0.5 97 chr3R 17530192 intergenic not near genes chr3R 17530240 intergenic not near genes chr3R 17530289 intergenic not near genes chr3R_4_17530001 chr3R_17530001 KN35_1-HE 2517 chr3R 17591284 17591312 chr3R 17591721 17591749 F-element 9 437 4.5 1.5 3.0 2.2 465 chr3R 17591284 intergenic not near genes chr3R 17591516 intergenic not near genes chr3R 17591749 intergenic not near genes chr3R_9_17590001 chr3R_17590001 KN35_1-HE 2518 chr3R 17638314 17638330 chr3R 17638801 17638817 roo 7 487 0.0 0.5 0.2 5.8 503 chr3R 17638314 intron CG43175 + chr3R 17638566 intron CG43175 + chr3R 17638817 intron,intron CG43175 +,CR45222 + chr3R_7_17635001 chr3R_17635001 KN35_1-HE 2519 chr3R 17714581 17714687 chr3R 17714474 17714745 11 79 6.5 30.0 18.2 0.6 164 chr3R 17714581 intron osa - chr3R 17714663 intron osa - chr3R 17714745 intron osa - chr3R_11_17710001 chr3R_17710001 KN35_1-HE 2520 chr3R 17725075 17725085 chr3R 17725170 17725180 4 95 4.5 0.0 2.2 1.2 105 chr3R 17725075 intergenic Atg8b - chr3R 17725128 intergenic Atg8b - chr3R 17725180 intergenic Atg8b - chr3R_4_17725001 chr3R_17725001 KN35_1-HE 2521 chr3R 17734843 17734856 chr3R 17734958 17734971 5 115 4.5 2.5 3.5 1.1 128 chr3R 17734843 intergenic CG14321 + chr3R 17734907 intergenic not near genes chr3R 17734971 intergenic not near genes chr3R_5_17730001 chr3R_17730001 KN35_1-HE 2522 chr3R 17749060 17749085 chr3R 17749144 17749145 7 80 5.0 0.0 2.5 2.0 85 chr3R 17749060 intergenic not near genes chr3R 17749102 intergenic not near genes chr3R 17749145 intergenic not near genes chr3R_7_17745001 chr3R_17745001 KN35_1-HE 2523 chr3R 17773391 17773393 chr3R 17773472 17773474 4 81 6.0 7.0 6.5 0.5 83 chr3R 17773391 intron CG43102 - chr3R 17773432 intron CG43102 - chr3R 17773474 intron CG43102 - chr3R_4_17770001 chr3R_17770001 KN35_1-HE 2524 chr3R 17812088 17812101 chr3R 17812165 17812178 5 77 2.5 0.0 1.2 2.3 90 chr3R 17812088 intron tinc + chr3R 17812133 intron tinc + chr3R 17812178 intron tinc + chr3R_5_17810001 chr3R_17810001 KN35_1-HE 2525 chr3R 17822128 17822161 chr3R 17822207 17822240 13 79 5.5 2.5 4.0 2.6 112 chr3R 17822128 intron tinc + chr3R 17822184 intron tinc + chr3R 17822240 intron tinc + chr3R_13_17820001 chr3R_17820001 KN35_1-HE 2526 chr3R 17823217 17823235 chr3R 17823303 17823321 17 86 4.5 9.5 7.0 2.1 104 chr3R 17823217 intron tinc + chr3R 17823269 intron tinc + chr3R 17823321 intron tinc + chr3R_17_17820001 chr3R_17820001 KN35_1-HE 2527 chr3R 17899088 17899106 chr3R 17899167 17899185 10 79 13.5 7.5 10.5 0.9 97 chr3R 17899088 intron Rim - chr3R 17899136 intron Rim - chr3R 17899185 intron Rim - chr3R_10_17895001 chr3R_17895001 KN35_1-HE 2528 chr3R 17925852 17925887 chr3R 17927320 17927355 hobo 29 1468 6.5 13.0 9.8 2.7 1503 chr3R 17925852 intron cpo + chr3R 17926604 intron cpo + chr3R 17927355 intron cpo + chr3R_29_17925001 chr3R_17925001 KN35_1-HE 2529 chr3R 18030477 18030481 chr3R 18030562 18030566 4 85 3.0 3.0 3.0 1.0 89 chr3R 18030477 intergenic not near genes chr3R 18030522 intergenic not near genes chr3R 18030566 intergenic not near genes chr3R_4_18030001 chr3R_18030001 KN35_1-HE 2530 chr3R 18041758 18041778 chr3R 18041836 18041856 10 78 0.0 0.5 0.2 8.3 98 chr3R 18041758 intergenic not near genes chr3R 18041807 intergenic not near genes chr3R 18041856 intergenic not near genes chr3R_10_18040001 chr3R_18040001 KN35_1-HE 2531 chr3R 18061583 18061609 chr3R 18063152 18063178 F-element 17 1569 8.0 8.0 8.0 1.9 1595 chr3R 18061583 intergenic not near genes chr3R 18062380 intergenic not near genes chr3R 18063178 intergenic not near genes chr3R_17_18060001 chr3R_18060001 KN35_1-HE 2532 chr3R 18078152 18078176 chr3R 18078232 18078256 8 80 3.5 0.0 1.8 2.9 104 chr3R 18078152 intergenic not near genes chr3R 18078204 intergenic not near genes chr3R 18078256 intergenic not near genes chr3R_8_18075001 chr3R_18075001 KN35_1-HE 2533 chr3R 15801081 15801082 chr3R 18210438 18210439 4 2409357 22.5 3.5 13.0 0.3 2409358 chr3R 15801081 3` UTR nsl1 + chr3R 17005760 exon Irc + chr3R 18210439 intron CG7985 + chr3R_4_17005001 chr3R_17005001 KN35_1-HE 2534 chr3R 18291847 18291882 chr3R 18291931 18291966 23 84 5.0 3.0 4.0 4.6 119 chr3R 18291847 intron l(3)05822 - chr3R 18291906 intron l(3)05822 - chr3R 18291966 intron l(3)05822 - chr3R_23_18290001 chr3R_18290001 KN35_1-HE 2535 chr3R 18331780 18331788 chr3R 18333275 18333283 hopper2 6 1495 10.0 3.5 6.8 0.8 1503 chr3R 18331780 3` UTR CG15803 - chr3R 18332532 intron CG15803 - chr3R 18333283 3` UTR CG15803 - chr3R_6_18330001 chr3R_18330001 KN35_1-HE 2536 chr3R 18347061 18347089 chr3R 18347348 18347376 12 287 7.0 5.0 6.0 1.7 315 chr3R 18347061 intron CG15803 - chr3R 18347218 intron CG15803 - chr3R 18347376 intron CG15803 - chr3R_12_18345001 chr3R_18345001 KN35_1-HE 2537 chr3R 18394471 18394504 chr3R 18394548 18394582 14 78 4.5 5.5 5.0 2.3 111 chr3R 18394471 intron Vha100-2 - chr3R 18394526 intron Vha100-2 - chr3R 18394582 intron Vha100-2 - chr3R_14_18390001 chr3R_18390001 KN35_1-HE 2538 chr3R 18395348 18395382 chr3R 18395634 18395668 8 286 2.5 0.5 1.5 3.2 320 chr3R 18395348 intron Vha100-2 - chr3R 18395508 intron Vha100-2 - chr3R 18395668 intron Vha100-2 - chr3R_8_18395001 chr3R_18395001 KN35_1-HE 2539 chr3R 18464331 18464338 chr3R 18464471 18464478 6 140 0.0 11.5 5.8 0.9 147 chr3R 18464331 intron fru - chr3R 18464404 intron fru - chr3R 18464478 intron fru - chr3R_6_18460001 chr3R_18460001 KN35_1-HE 2540 chr3R 18472285 18472299 chr3R 18472387 18472401 8 102 4.0 2.0 3.0 2.0 116 chr3R 18472285 intron fru - chr3R 18472343 intron fru - chr3R 18472401 intron fru - chr3R_8_18470001 chr3R_18470001 KN35_1-HE 2541 chr3R 18473234 18473255 chr3R 18473322 18473343 13 88 0.0 2.5 1.2 5.9 109 chr3R 18473234 intron fru - chr3R 18473288 intron fru - chr3R 18473343 intron fru - chr3R_13_18470001 chr3R_18470001 KN35_1-HE 2542 chr3R 18500735 18500738 chr3R 18500857 18500860 5 122 0.5 3.5 2.0 1.7 125 chr3R 18500735 intron fru - chr3R 18500798 intron fru - chr3R 18500860 intron fru - chr3R_5_18500001 chr3R_18500001 KN35_1-HE 2543 chr3R 18501592 18501629 chr3R 18501674 18501711 26 82 5.0 12.0 8.5 2.7 119 chr3R 18501592 intron fru - chr3R 18501652 intron fru - chr3R 18501711 intron fru - chr3R_26_18500001 chr3R_18500001 KN35_1-HE 2544 chr3R 18559506 18559519 chr3R 18559655 18559668 5 149 0.0 7.0 3.5 1.1 162 chr3R 18559506 intergenic CG7691 + chr3R 18559587 intergenic CG7691 + chr3R 18559668 intergenic CG7691 + chr3R_5_18555001 chr3R_18555001 KN35_1-HE 2545 chr3R 18606510 18606534 chr3R 18610743 18610767 F-element 20 4233 4.5 8.0 6.2 2.8 4257 chr3R 18606510 intron,intron qin +,CG14304 - chr3R 18608638 intron,intron qin +,CG14304 - chr3R 18610767 intron,intron qin +,CG14304 - chr3R_20_18605001 chr3R_18605001 KN35_1-HE 2546 chr3R 18617712 18617744 chr3R 18617793 18617825 14 81 2.5 7.0 4.8 2.4 113 chr3R 18617712 intron,intron qin +,CG14304 - chr3R 18617768 intron,intron qin +,CG14304 - chr3R 18617825 intron,intron qin +,CG14304 - chr3R_14_18615001 chr3R_18615001 KN35_1-HE 2547 chr3R 18618264 18618297 chr3R 18618350 18618383 18 86 2.0 2.5 2.2 5.6 119 chr3R 18618264 intron,intron qin +,CG14304 - chr3R 18618324 intron,intron qin +,CG14304 - chr3R 18618383 intron,intron qin +,CG14304 - chr3R_18_18615001 chr3R_18615001 KN35_1-HE 2548 chr3R 18670380 18670413 chr3R 18670474 18670507 11 94 2.5 2.5 2.5 3.1 127 chr3R 18670380 intron CG7702 + chr3R 18670444 intron CG7702 + chr3R 18670507 intron CG7702 + chr3R_11_18670001 chr3R_18670001 KN35_1-HE 2549 chr3R 18698062 18698083 chr3R 18698151 18698171 13 89 0.0 13.0 6.5 1.7 109 chr3R 18698062 intergenic not near genes chr3R 18698116 intergenic not near genes chr3R 18698171 intergenic not near genes chr3R_13_18695001 chr3R_18695001 KN35_1-HE 2550 chr3R 18703286 18703314 chr3R 18703395 18703423 11 109 2.5 0.0 1.2 5.0 137 chr3R 18703286 intergenic not near genes chr3R 18703354 intergenic not near genes chr3R 18703423 intergenic not near genes chr3R_11_18700001 chr3R_18700001 KN35_1-HE 2551 chr3R 18730024 18730037 chr3R 18730101 18730114 8 77 4.5 8.0 6.2 1.1 90 chr3R 18730024 intron Cha + chr3R 18730069 intron Cha + chr3R 18730114 exon Cha + chr3R_8_18730001 chr3R_18730001 KN35_1-HE 2552 chr3R 18739745 18739778 chr3R 18739824 18739857 10 79 1.5 2.0 1.8 3.6 112 chr3R 18739745 intron Mekk1 - chr3R 18739801 intron Mekk1 - chr3R 18739857 intron Mekk1 - chr3R_10_18735001 chr3R_18735001 KN35_1-HE 2553 chr3R 18770291 18770318 chr3R 18770374 18770401 9 83 3.5 4.5 4.0 1.8 110 chr3R 18770291 intron CG7720 - chr3R 18770346 intron CG7720 - chr3R 18770401 intron CG7720 - chr3R_9_18770001 chr3R_18770001 KN35_1-HE 2554 chr3R 18773295 18773331 chr3R 18773372 18773408 16 77 2.0 3.0 2.5 4.6 113 chr3R 18773295 intron CG7720 - chr3R 18773352 intron CG7720 - chr3R 18773408 intron CG7720 - chr3R_16_18770001 chr3R_18770001 KN35_1-HE 2555 chr3R 18781699 18781726 chr3R 18781776 18781803 13 76 5.5 6.5 6.0 1.9 104 chr3R 18781699 intron CG7720 - chr3R 18781751 intron CG7720 - chr3R 18781803 intron CG7720 - chr3R_13_18780001 chr3R_18780001 KN35_1-HE 2556 chr3R 18783592 18783622 chr3R 18783764 18783794 13 172 30.5 33.5 32.0 0.4 202 chr3R 18783592 intron CG7720 - chr3R 18783693 intron CG7720 - chr3R 18783794 intron CG7720 - chr3R_13_18780001 chr3R_18780001 KN35_1-HE 2557 chr3R 18784545 18784573 chr3R 18784630 18784658 15 85 1.0 7.0 4.0 3.0 113 chr3R 18784545 intron CG7720 - chr3R 18784602 intron CG7720 - chr3R 18784658 intron CG7720 - chr3R_15_18780001 chr3R_18780001 KN35_1-HE 2558 chr3R 18802126 18802158 chr3R 18802212 18802244 13 86 3.5 5.0 4.2 2.5 118 chr3R 18802126 3` UTR CG18208 - chr3R 18802185 3` UTR CG18208 - chr3R 18802244 3` UTR CG18208 - chr3R_13_18800001 chr3R_18800001 KN35_1-HE 2559 chr3R 18839811 18839837 chr3R 18839896 18839922 9 85 4.0 6.0 5.0 1.5 111 chr3R 18839811 intron CG18208 - chr3R 18839866 intron CG18208 - chr3R 18839922 intron CG18208 - chr3R_9_18835001 chr3R_18835001 KN35_1-HE 2560 chr3R 18894778 18894815 chr3R 18894861 18894898 17 83 7.0 10.0 8.5 1.8 120 chr3R 18894778 intergenic not near genes chr3R 18894838 intergenic not near genes chr3R 18894898 intergenic not near genes chr3R_17_18890001 chr3R_18890001 KN35_1-HE 2561 chr3R 18895401 18895585 chr3R 18895479 18895671 43 81 6.0 4.0 5.0 7.2 270 chr3R 18895401 intergenic not near genes chr3R 18895536 intergenic not near genes chr3R 18895671 intergenic not near genes chr3R_43_18895001 chr3R_18895001 KN35_1-HE 2562 chr3R 18946263 18946287 chr3R 18946368 18946392 25 105 6.0 9.5 7.8 2.8 129 chr3R 18946263 intron CG42613 + chr3R 18946328 intron CG42613 + chr3R 18946392 intron CG42613 + chr3R_25_18945001 chr3R_18945001 KN35_1-HE 2563 chr3R 18968116 18968118 chr3R 24430382 24430384 6 5462266 12.5 36.5 24.5 0.2 5462268 chr3R 18968116 intron,intron CG42613 +,CG43732 + chr3R 21699250 intron CG31176 - chr3R 24430384 intron nAChRalpha1 - chr3R_6_21695001 chr3R_21695001 KN35_1-HE 2564 chr3R 19106819 19106829 chr3R 19106910 19106920 4 91 4.0 0.5 2.2 1.2 101 chr3R 19106819 intron CG6040 + chr3R 19106870 intron CG6040 + chr3R 19106920 intron CG6040 + chr3R_4_19105001 chr3R_19105001 KN35_1-HE 2565 chr3R 19188227 19188262 chr3R 19188337 19188372 14 110 3.5 6.5 5.0 2.3 145 chr3R 19188227 intron CG31475 + chr3R 19188300 intron CG31475 + chr3R 19188372 intron CG31475 + chr3R_14_19185001 chr3R_19185001 KN35_1-HE 2566 chr3R 19193004 19193014 chr3R 19197309 19197319 F-element 5 4305 1.5 9.0 5.2 0.8 4315 chr3R 19193004 intron CG31475 + chr3R 19195162 intron CG31475 + chr3R 19197319 intron CG31475 + chr3R_5_19195001 chr3R_19195001 KN35_1-HE 2567 chr3R 19246660 19246688 chr3R 19246747 19246775 18 87 0.0 6.5 3.2 4.3 115 chr3R 19246660 intergenic CG5217 - chr3R 19246718 intergenic CG5217 - chr3R 19246775 intergenic CG5217 - chr3R_18_19245001 chr3R_19245001 KN35_1-HE 2568 chr3R 19276934 19276949 chr3R 19277015 19277030 4 81 3.5 6.0 4.8 0.7 96 chr3R 19276934 intergenic not near genes chr3R 19276982 intergenic not near genes chr3R 19277030 intergenic not near genes chr3R_4_19275001 chr3R_19275001 KN35_1-HE 2569 chr3R 19340395 19340427 chr3R 19340473 19340505 19 78 2.0 3.5 2.8 5.0 110 chr3R 19340395 intergenic not near genes chr3R 19340450 intergenic not near genes chr3R 19340505 intergenic not near genes chr3R_19_19340001 chr3R_19340001 KN35_1-HE 2570 chr3R 19341263 19341291 chr3R 19341343 19341371 13 80 6.5 5.0 5.8 1.9 108 chr3R 19341263 intergenic not near genes chr3R 19341317 intergenic not near genes chr3R 19341371 intergenic not near genes chr3R_13_19340001 chr3R_19340001 KN35_1-HE 2571 chr3R 19344671 19344683 chr3R 19344807 19344819 8 136 11.0 2.5 6.8 1.0 148 chr3R 19344671 intergenic not near genes chr3R 19344745 intergenic not near genes chr3R 19344819 intergenic not near genes chr3R_8_19340001 chr3R_19340001 KN35_1-HE 2572 chr3R 19426074 19426111 chr3R 19426253 19426290 19 179 3.5 4.5 4.0 3.8 216 chr3R 19426074 intron CG31221 + chr3R 19426182 intron CG31221 + chr3R 19426290 intron CG31221 + chr3R_19_19425001 chr3R_19425001 KN35_1-HE 2573 chr3R 19532995 19533011 chr3R 19533188 19533204 8 193 7.0 0.0 3.5 1.8 209 chr3R 19532995 intron Dys + chr3R 19533100 intron Dys + chr3R 19533204 intron Dys + chr3R_8_19530001 chr3R_19530001 KN35_1-HE 2574 chr3R 19582161 19582190 chr3R 19582240 19582269 16 79 0.0 5.5 2.8 4.2 108 chr3R 19582161 intron Dys + chr3R 19582215 intron Dys + chr3R 19582269 intron Dys + chr3R_16_19580001 chr3R_19580001 KN35_1-HE 2575 chr3R 19593505 19593517 chr3R 19593591 19593603 10 86 5.0 4.5 4.8 1.7 98 chr3R 19593505 intron Dys + chr3R 19593554 intron Dys + chr3R 19593603 intron Dys + chr3R_10_19590001 chr3R_19590001 KN35_1-HE 2576 chr3R 19598730 19598761 chr3R 19598813 19598844 17 83 3.5 6.0 4.8 2.9 114 chr3R 19598730 intron Cpr92A - chr3R 19598787 intron Cpr92A - chr3R 19598844 5` UTR Cpr92A - chr3R_17_19595001 chr3R_19595001 KN35_1-HE 2577 chr3R 19602755 19602787 chr3R 19602834 19602866 18 79 3.0 3.5 3.2 4.3 111 chr3R 19602755 intergenic CG7333 + chr3R 19602810 intergenic CG7333 + chr3R 19602866 intergenic CG7333 + chr3R_18_19600001 chr3R_19600001 KN35_1-HE 2578 chr3R 19603465 19603502 chr3R 19603925 19603962 24 460 3.0 4.0 3.5 5.3 497 chr3R 19603465 intron CG7342 + chr3R 19603714 intron CG7342 + chr3R 19603962 5` UTR CG7342 + chr3R_24_19600001 chr3R_19600001 KN35_1-HE 2579 chr3R 19619460 19619493 chr3R 19619906 19619939 14 446 5.5 5.0 5.2 2.3 479 chr3R 19619460 intron CG6231 - chr3R 19619700 intron CG6231 - chr3R 19619939 intron CG6231 - chr3R_14_19615001 chr3R_19615001 KN35_1-HE 2580 chr3R 19690102 19690138 chr3R 19690190 19690226 13 88 4.5 5.0 4.8 2.2 124 chr3R 19690102 intron Naam + chr3R 19690164 intron Naam + chr3R 19690226 intron Naam + chr3R_13_19690001 chr3R_19690001 KN35_1-HE 2581 chr3R 19702319 19702355 chr3R 19702402 19702438 25 83 3.0 6.0 4.5 4.5 119 chr3R 19702319 intergenic not near genes chr3R 19702378 intergenic not near genes chr3R 19702438 intergenic not near genes chr3R_25_19700001 chr3R_19700001 KN35_1-HE 2582 chr3R 19716214 19716248 chr3R 19716292 19716326 20 78 3.5 0.0 1.8 7.1 112 chr3R 19716214 intergenic CG34286 - chr3R 19716270 intergenic CG34286 - chr3R 19716326 intergenic CG34286 - chr3R_20_19715001 chr3R_19715001 KN35_1-HE 2583 chr3R 19718901 19718935 chr3R 19718982 19719016 10 81 0.0 5.5 2.8 2.6 115 chr3R 19718901 intergenic not near genes chr3R 19718958 intergenic not near genes chr3R 19719016 intergenic not near genes chr3R_10_19715001 chr3R_19715001 KN35_1-HE 2584 chr3R 19750042 19750071 chr3R 19750123 19750152 17 80 7.5 7.5 7.5 2.0 110 chr3R 19750042 intron GluClalpha + chr3R 19750097 intron GluClalpha + chr3R 19750152 intron GluClalpha + chr3R_17_19750001 chr3R_19750001 KN35_1-HE 2585 chr3R 19777306 19777310 chr3R 19777473 19777477 4 167 6.0 4.0 5.0 0.7 171 chr3R 19777306 intergenic CG11659 - chr3R 19777392 intergenic CG11659 - chr3R 19777477 intergenic CG11659 - chr3R_4_19775001 chr3R_19775001 KN35_1-HE 2586 chr3R 19785786 19785801 chr3R 19785873 19785888 7 87 7.0 0.0 3.5 1.6 102 chr3R 19785786 intergenic CG11453 + chr3R 19785837 intergenic CG11453 + chr3R 19785888 intergenic CG11453 + chr3R_7_19785001 chr3R_19785001 KN35_1-HE 2587 chr3R 19800687 19800709 chr3R 19800759 19800787 8 76 3.5 3.0 3.2 1.9 100 chr3R 19800687 intron bnl - chr3R 19800737 intron bnl - chr3R 19800787 intron bnl - chr3R_8_19800001 chr3R_19800001 KN35_1-HE 2588 chr3R 19914146 19914185 chr3R 19914225 19914264 15 79 5.0 2.5 3.8 3.1 118 chr3R 19914146 3` UTR RhoGAP92B + chr3R 19914205 3` UTR RhoGAP92B + chr3R 19914264 3` UTR RhoGAP92B + chr3R_15_19910001 chr3R_19910001 KN35_1-HE 2589 chr3R 19949443 19949463 chr3R 19949575 19949595 5 132 0.5 3.0 1.8 1.8 152 chr3R 19949443 intron Hs6st - chr3R 19949519 intron Hs6st - chr3R 19949595 intron Hs6st - chr3R_5_19945001 chr3R_19945001 KN35_1-HE 2590 chr3R 20045705 20045724 chr3R 20045790 20045810 4 86 0.5 2.5 1.5 1.6 105 chr3R 20045705 intron,5` UTR,3` UTR CG17193 -,CG33934 +,Indy-2 + chr3R 20045758 intron,5` UTR,3` UTR CG17193 -,CG33934 +,Indy-2 + chr3R 20045810 intron,5` UTR,3` UTR CG17193 -,CG33934 +,Indy-2 + chr3R_4_20045001 chr3R_20045001 KN35_1-HE 2591 chr3R 20063282 20063310 chr3R 20063363 20063391 10 81 5.0 5.5 5.2 1.6 109 chr3R 20063282 intergenic not near genes chr3R 20063336 intergenic not near genes chr3R 20063391 intergenic not near genes chr3R_10_20060001 chr3R_20060001 KN35_1-HE 2592 chr3R 20109537 20109570 chr3R 20114744 20114777 copia 18 5207 3.0 7.0 5.0 3.0 5240 chr3R 20109537 intergenic not near genes chr3R 20112157 intergenic not near genes chr3R 20114777 intergenic CG10887 + chr3R_18_20110001 chr3R_20110001 KN35_1-HE 2593 chr3R 20145260 20145294 chr3R 20145342 20145376 15 82 7.0 3.0 5.0 2.5 116 chr3R 20145260 intergenic not near genes chr3R 20145318 intergenic not near genes chr3R 20145376 intergenic not near genes chr3R_15_20145001 chr3R_20145001 KN35_1-HE 2594 chr3R 20155607 20155643 chr3R 20155685 20155721 11 78 5.5 3.5 4.5 2.0 114 chr3R 20155607 intergenic not near genes chr3R 20155664 intergenic not near genes chr3R 20155721 intergenic not near genes chr3R_11_20155001 chr3R_20155001 KN35_1-HE 2595 chr3R 20156691 20156719 chr3R 20165862 20165890 roo 18 9171 5.5 7.5 6.5 2.4 9199 chr3R 20156691 intergenic not near genes chr3R 20161290 intergenic not near genes chr3R 20165890 intergenic not near genes chr3R_18_20160001 chr3R_20160001 KN35_1-HE 2596 chr3R 20181275 20181296 chr3R 20181384 20181405 10 109 4.0 4.0 4.0 2.0 130 chr3R 20181275 intergenic not near genes chr3R 20181340 intergenic not near genes chr3R 20181405 intergenic not near genes chr3R_10_20180001 chr3R_20180001 KN35_1-HE 2597 chr3R 20240267 20240300 chr3R 20240617 20240650 17 350 3.0 6.5 4.8 2.9 383 chr3R 20240267 intron Nlg4 + chr3R 20240458 intron Nlg4 + chr3R 20240650 intron Nlg4 + chr3R_17_20240001 chr3R_20240001 KN35_1-HE 2598 chr3R 20245276 20245305 chr3R 20248887 20248916 F-element 13 3611 4.5 4.5 4.5 2.4 3640 chr3R 20245276 3` UTR Nlg4 + chr3R 20247096 intergenic not near genes chr3R 20248916 intergenic not near genes chr3R_13_20245001 chr3R_20245001 KN35_1-HE 2599 chr3R 20256850 20256870 chr3R 20256928 20256949 11 79 0.0 10.0 5.0 1.8 99 chr3R 20256850 intron cic + chr3R 20256900 intron cic + chr3R 20256949 intron cic + chr3R_11_20255001 chr3R_20255001 KN35_1-HE 2600 chr3R 12183404 12183405 chr3R 20257593 20257616 4 8074197 12.0 23.0 17.5 0.2 8074212 chr3R 12183404 intergenic not near genes chr3R 16220510 intergenic not near genes chr3R 20257616 intron cic + chr3R_4_16220001 chr3R_16220001 KN35_1-HE 2601 chr3R 20266513 20266548 chr3R 20272985 20273020 Burdock 31 6472 2.0 5.0 3.5 6.9 6507 chr3R 20266513 intron cic + chr3R 20269766 intron cic + chr3R 20273020 intron cic + chr3R_31_20265001 chr3R_20265001 KN35_1-HE 2602 chr3R 20282274 20282308 chr3R 20282351 20282385 16 77 1.0 7.0 4.0 3.2 111 chr3R 20282274 intron cic + chr3R 20282330 intron cic + chr3R 20282385 intron cic + chr3R_16_20280001 chr3R_20280001 KN35_1-HE 2603 chr3R 12396234 12396236 chr3R 20285456 20285459 5 7889222 13.5 0.0 6.8 0.6 7889225 chr3R 12396234 intron CG34402 + chr3R 16340846 exon SF2 - chr3R 20285459 intron cic + chr3R_5_16340001 chr3R_16340001 KN35_1-HE 2604 chr3R 20330995 20331025 chr3R 20331482 20331512 roo 15 487 4.0 5.5 4.8 2.6 517 chr3R 20330995 intergenic Sirt2 + chr3R 20331254 intergenic Sirt2 + chr3R 20331512 intergenic not near genes chr3R_15_20330001 chr3R_20330001 KN35_1-HE 2605 chr3R 20434844 20434855 chr3R 20435030 20435041 6 186 9.5 1.0 5.2 1.0 197 chr3R 20434844 intron Gfrl - chr3R 20434942 intron Gfrl - chr3R 20435041 intron Gfrl - chr3R_6_20430001 chr3R_20430001 KN35_1-HE 2606 chr3R 20506587 20506616 chr3R 20507391 20507420 BS 6 804 6.0 3.5 4.8 1.0 833 chr3R 20506587 intergenic Or92a + chr3R 20507004 intergenic CG4288 - chr3R 20507420 3` UTR CG4288 - chr3R_6_20505001 chr3R_20505001 KN35_1-HE 2607 chr3R 20513001 20513032 chr3R 20515705 20515736 opus 15 2704 7.0 3.0 5.0 2.5 2735 chr3R 20513001 intergenic not near genes chr3R 20514368 intergenic not near genes chr3R 20515736 intergenic not near genes chr3R_15_20510001 chr3R_20510001 KN35_1-HE 2608 chr3R 20518451 20518485 chr3R 20518541 20518575 13 90 3.0 3.0 3.0 3.2 124 chr3R 20518451 intergenic not near genes chr3R 20518513 intergenic not near genes chr3R 20518575 intergenic not near genes chr3R_13_20515001 chr3R_20515001 KN35_1-HE 2609 chr3R 20545978 20546010 chr3R 20546061 20546096 10 85 2.5 2.5 2.5 2.9 118 chr3R 20545978 intron Stat92E - chr3R 20546037 intron Stat92E - chr3R 20546096 intron Stat92E - chr3R_10_20545001 chr3R_20545001 KN35_1-HE 2610 chr3R 20594479 20594510 chr3R 20594570 20594601 16 91 4.5 0.0 2.2 5.0 122 chr3R 20594479 intron bon + chr3R 20594540 intron bon + chr3R 20594601 intron bon + chr3R_16_20590001 chr3R_20590001 KN35_1-HE 2611 chr3R 20664239 20664257 chr3R 20664379 20664397 4 140 1.5 5.0 3.2 1.0 158 chr3R 20664239 intergenic not near genes chr3R 20664318 intergenic not near genes chr3R 20664397 intergenic not near genes chr3R_4_20660001 chr3R_20660001 KN35_1-HE 2612 chr3R 20703479 20703515 chr3R 20703874 20703910 23 395 6.0 3.0 4.5 4.2 431 chr3R 20703479 intron Oamb - chr3R 20703694 intron Oamb - chr3R 20703910 intron Oamb - chr3R_23_20700001 chr3R_20700001 KN35_1-HE 2613 chr3R 20707744 20707772 chr3R 20707960 20707988 16 216 7.0 6.0 6.5 2.1 244 chr3R 20707744 intron Oamb - chr3R 20707866 intron Oamb - chr3R 20707988 intron Oamb - chr3R_16_20705001 chr3R_20705001 KN35_1-HE 2614 chr3R 20730930 20731059 chr3R 20731031 20731148 13 96 0.0 0.0 0.0 13.0 218 chr3R 20730930 intergenic not near genes chr3R 20731039 intergenic not near genes chr3R 20731148 intergenic CG31205 + chr3R_13_20730001 chr3R_20730001 KN35_1-HE 2615 chr3R 20787438 20787457 chr3R 20787530 20787549 9 92 9.0 8.5 8.8 0.9 111 chr3R 20787438 intron Syp + chr3R 20787494 intron Syp + chr3R 20787549 intron Syp + chr3R_9_20785001 chr3R_20785001 KN35_1-HE 2616 chr3R 20835293 20835321 chr3R 20835430 20835458 16 137 4.0 6.0 5.0 2.7 165 chr3R 20835293 exon Synd + chr3R 20835376 intron Synd + chr3R 20835458 intron Synd + chr3R_16_20835001 chr3R_20835001 KN35_1-HE 2617 chr3R 20848350 20848358 chr3R 20848441 20848449 5 91 4.0 3.0 3.5 1.1 99 chr3R 20848350 intergenic not near genes chr3R 20848400 intergenic not near genes chr3R 20848449 intergenic not near genes chr3R_5_20845001 chr3R_20845001 KN35_1-HE 2618 chr3R 20850084 20850108 chr3R 20850170 20850194 9 86 6.0 2.0 4.0 1.8 110 chr3R 20850084 intergenic RpS30 + chr3R 20850139 intergenic RpS30 + chr3R 20850194 intergenic RpS30 + chr3R_9_20850001 chr3R_20850001 KN35_1-HE 2619 chr3R 20854484 20854518 chr3R 20859275 20859309 Doc 7 4791 8.0 8.5 8.2 0.8 4825 chr3R 20854484 intron Ir93a - chr3R 20856896 intron Ir93a - chr3R 20859309 exon Ir93a - chr3R_7_20855001 chr3R_20855001 KN35_1-HE 2620 chr3R 20870254 20870282 chr3R 20870340 20870368 20 86 4.0 8.5 6.2 2.8 114 chr3R 20870254 intergenic not near genes chr3R 20870311 intergenic not near genes chr3R 20870368 intergenic not near genes chr3R_20_20870001 chr3R_20870001 KN35_1-HE 2621 chr3R 20872322 20872342 chr3R 20872415 20872435 11 93 12.0 14.5 13.2 0.8 113 chr3R 20872322 intergenic not near genes chr3R 20872378 intergenic not near genes chr3R 20872435 intergenic not near genes chr3R_11_20870001 chr3R_20870001 KN35_1-HE 2622 chr3R 20899920 20899944 chr3R 20900017 20900041 8 97 2.0 6.0 4.0 1.6 121 chr3R 20899920 intergenic not near genes chr3R 20899980 intergenic not near genes chr3R 20900041 intergenic not near genes chr3R_8_20895001 chr3R_20895001 KN35_1-HE 2623 chr3R 20936085 20936095 chr3R 20936163 20936173 6 78 4.0 0.5 2.2 1.9 88 chr3R 20936085 intron CG31191 - chr3R 20936129 intron CG31191 - chr3R 20936173 intron CG31191 - chr3R_6_20935001 chr3R_20935001 KN35_1-HE 2624 chr3R 20994980 20994981 chr3R 20995036 20995062 7 69 2.5 4.5 3.5 1.6 82 chr3R 20994980 intron Calx + chr3R 20995021 intron Calx + chr3R 20995062 intron Calx + chr3R_7_20995001 chr3R_20995001 KN35_1-HE 2625 chr3R 21020398 21020433 chr3R 21020475 21020510 22 77 3.5 3.5 3.5 4.9 112 chr3R 21020398 3` UTR Rlip + chr3R 21020454 3` UTR Rlip + chr3R 21020510 3` UTR Rlip + chr3R_22_21020001 chr3R_21020001 KN35_1-HE 2626 chr3R 21074806 21074830 chr3R 21075028 21075052 8 222 2.0 5.5 3.8 1.7 246 chr3R 21074806 intron dmrt93B + chr3R 21074929 intron dmrt93B + chr3R 21075052 intron dmrt93B + chr3R_8_21070001 chr3R_21070001 KN35_1-HE 2627 chr3R 21108040 21108065 chr3R 21108300 21108327 13 262 2.5 1.0 1.8 4.6 287 chr3R 21108040 intergenic Sec15 -,rtet + chr3R 21108184 intergenic Sec15 -,rtet + chr3R 21108327 intergenic rtet +,Sec15 - chr3R_13_21105001 chr3R_21105001 KN35_1-HE 2628 chr3R 21141675 21141702 chr3R 21150155 21150184 Tirant 10 8481 4.0 4.0 4.0 2.0 8509 chr3R 21141675 intron SNF4Agamma + chr3R 21145930 intron SNF4Agamma + chr3R 21150184 intron SNF4Agamma + chr3R_10_21145001 chr3R_21145001 KN35_1-HE 2629 chr3R 21154549 21154586 chr3R 21154755 21154802 12 211 3.5 0.0 1.8 4.3 253 chr3R 21154549 intron SNF4Agamma + chr3R 21154676 intron SNF4Agamma + chr3R 21154802 intron SNF4Agamma + chr3R_12_21150001 chr3R_21150001 KN35_1-HE 2630 chr3R 21183245 21183263 chr3R 21183324 21183342 9 79 5.5 6.0 5.8 1.3 97 chr3R 21183245 intron SNF4Agamma + chr3R 21183294 intron SNF4Agamma + chr3R 21183342 intron SNF4Agamma + chr3R_9_21180001 chr3R_21180001 KN35_1-HE 2631 chr3R 21214743 21214761 chr3R 21214916 21214934 11 173 4.5 2.5 3.5 2.4 191 chr3R 21214743 intergenic CG5862 + chr3R 21214838 intergenic CG5862 + chr3R 21214934 intergenic CG5862 + chr3R_11_21210001 chr3R_21210001 KN35_1-HE 2632 chr3R 21240443 21240479 chr3R 21240536 21240572 13 93 3.5 4.5 4.0 2.6 129 chr3R 21240443 intergenic not near genes chr3R 21240508 intergenic not near genes chr3R 21240572 intergenic not near genes chr3R_13_21240001 chr3R_21240001 KN35_1-HE 2633 chr3R 21383270 21383296 chr3R 21383351 21383377 13 81 0.0 8.0 4.0 2.6 107 chr3R 21383270 intergenic not near genes chr3R 21383324 intergenic not near genes chr3R 21383377 intergenic not near genes chr3R_13_21380001 chr3R_21380001 KN35_1-HE 2634 chr3R 21385929 21385964 chr3R 21386007 21386042 14 78 3.0 2.0 2.5 4.0 113 chr3R 21385929 intergenic not near genes chr3R 21385986 intergenic not near genes chr3R 21386042 intergenic not near genes chr3R_14_21385001 chr3R_21385001 KN35_1-HE 2635 chr3R 21392301 21392328 chr3R 21392380 21392407 7 79 1.5 4.0 2.8 1.8 106 chr3R 21392301 intergenic not near genes chr3R 21392354 intergenic not near genes chr3R 21392407 intergenic not near genes chr3R_7_21390001 chr3R_21390001 KN35_1-HE 2636 chr3R 21408857 21408871 chr3R 21408937 21408951 9 80 3.5 5.0 4.2 1.7 94 chr3R 21408857 intergenic CheB93b + chr3R 21408904 intergenic CheB93b + chr3R 21408951 intergenic CheB93b + chr3R_9_21405001 chr3R_21405001 KN35_1-HE 2637 chr3R 21419102 21419118 chr3R 21419183 21419199 6 81 0.0 2.5 1.2 2.7 97 chr3R 21419102 intron lbl - chr3R 21419150 intron lbl - chr3R 21419199 intron lbl - chr3R_6_21415001 chr3R_21415001 KN35_1-HE 2638 chr3R 21435183 21435217 chr3R 21435419 21435453 8 236 0.5 3.0 1.8 2.9 270 chr3R 21435183 intergenic not near genes chr3R 21435318 intergenic not near genes chr3R 21435453 intergenic not near genes chr3R_8_21435001 chr3R_21435001 KN35_1-HE 2639 chr3R 21469814 21469840 chr3R 21469899 21469925 8 85 4.0 3.5 3.8 1.7 111 chr3R 21469814 intergenic not near genes chr3R 21469870 intergenic not near genes chr3R 21469925 intergenic not near genes chr3R_8_21465001 chr3R_21465001 KN35_1-HE 2640 chr3R 21472016 21472028 chr3R 21472098 21472110 5 82 6.5 2.0 4.2 1.0 94 chr3R 21472016 intergenic not near genes chr3R 21472063 intergenic not near genes chr3R 21472110 intergenic not near genes chr3R_5_21470001 chr3R_21470001 KN35_1-HE 2641 chr3R 21481385 21481393 chr3R 21481477 21481485 6 92 10.0 0.0 5.0 1.0 100 chr3R 21481385 intergenic not near genes chr3R 21481435 intergenic not near genes chr3R 21481485 intergenic not near genes chr3R_6_21480001 chr3R_21480001 KN35_1-HE 2642 chr3R 21506870 21506913 chr3R 21506957 21506994 10 83 0.0 5.5 2.8 2.6 124 chr3R 21506870 intron C15 + chr3R 21506932 intron C15 + chr3R 21506994 intron C15 + chr3R_10_21505001 chr3R_21505001 KN35_1-HE 2643 chr3R 21518017 21518269 chr3R 21518147 21518354 6 92 0.0 0.0 0.0 6.0 337 chr3R 21518017 intergenic not near genes chr3R 21518186 intergenic not near genes chr3R 21518354 intergenic not near genes chr3R_6_21515001 chr3R_21515001 KN35_1-HE 2644 chr3R 21519988 21520136 chr3R 21520090 21520231 22 99 3.5 3.5 3.5 4.9 243 chr3R 21519988 intergenic not near genes chr3R 21520110 intergenic not near genes chr3R 21520231 intergenic not near genes chr3R_22_21520001 chr3R_21520001 KN35_1-HE 2645 chr3R 21662363 21662370 chr3R 21662440 21662447 4 77 0.0 0.0 0.0 4.0 84 chr3R 21662363 intron CG6353 - chr3R 21662405 intron CG6353 - chr3R 21662447 intron CG6353 - chr3R_4_21660001 chr3R_21660001 KN35_1-HE 2646 chr3R 21751135 21751166 chr3R 21753930 21753961 5 2798 28.5 23.5 26.0 0.2 2826 chr3R 21751135 exon CG31233 + chr3R 21752548 exon CG31233 + chr3R 21753961 intergenic CG31198 + chr3R_5_21750001 chr3R_21750001 KN35_1-HE 2647 chr3R 21761117 21761154 chr3R 21768510 21768547 mdg1 8 7391 3.0 2.5 2.8 2.1 7430 chr3R 21761117 exon CG42335 + chr3R 21764832 intron CG42335 + chr3R 21768547 exon CG42335 + chr3R_8_21760001 chr3R_21760001 KN35_1-HE 2648 chr3R 21790957 21790990 chr3R 21791043 21791076 24 85 5.5 8.5 7.0 3.0 119 chr3R 21790957 intron CASK - chr3R 21791016 intron CASK - chr3R 21791076 intron CASK - chr3R_24_21790001 chr3R_21790001 KN35_1-HE 2649 chr3R 21903628 21903635 chr3R 21903726 21903733 5 98 0.0 3.0 1.5 2.0 105 chr3R 21903628 intron CG6678 + chr3R 21903680 intron CG6678 + chr3R 21903733 intron CG6678 + chr3R_5_21900001 chr3R_21900001 KN35_1-HE 2650 chr3R 21927362 21927392 chr3R 21927804 21927824 15 441 4.5 6.5 5.5 2.3 462 chr3R 21927362 intergenic not near genes chr3R 21927593 intergenic not near genes chr3R 21927824 intergenic not near genes chr3R_15_21925001 chr3R_21925001 KN35_1-HE 2651 chr3R 21938063 21938083 chr3R 21938222 21938242 7 159 0.5 5.0 2.8 1.8 179 chr3R 21938063 intergenic not near genes chr3R 21938152 intergenic not near genes chr3R 21938242 intergenic not near genes chr3R_7_21935001 chr3R_21935001 KN35_1-HE 2652 chr3R 21985226 21985262 chr3R 21985332 21985368 17 106 6.0 3.5 4.8 2.9 142 chr3R 21985226 intron Eip93F + chr3R 21985297 intron Eip93F + chr3R 21985368 intron Eip93F + chr3R_17_21985001 chr3R_21985001 KN35_1-HE 2653 chr3R 22055107 22055122 chr3R 22055202 22055217 6 95 9.5 7.5 8.5 0.6 110 chr3R 22055107 intron how + chr3R 22055162 intron how + chr3R 22055217 intron how + chr3R_6_22055001 chr3R_22055001 KN35_1-HE 2654 chr3R 22074876 22074887 chr3R 22082951 22082979 12 8076 44.0 31.0 37.5 0.3 8103 chr3R 22074876 3` UTR how + chr3R 22078928 3` UTR how + chr3R 22082979 exon CG13408 + chr3R_12_22075001 chr3R_22075001 KN35_1-HE 2655 chr3R 22234085 22234098 chr3R 22234163 22234176 16 78 4.0 10.0 7.0 2.0 91 chr3R 22234085 intron SKIP + chr3R 22234130 intron SKIP + chr3R 22234176 intron SKIP + chr3R_16_22230001 chr3R_22230001 KN35_1-HE 2656 chr3R 22234681 22234715 chr3R 22236001 22236035 pogo 19 1320 3.5 6.5 5.0 3.2 1354 chr3R 22234681 intron SKIP + chr3R 22235358 intron SKIP + chr3R 22236035 intron SKIP + chr3R_19_22235001 chr3R_22235001 KN35_1-HE 2657 chr3R 22328444 22328466 chr3R 22328527 22328549 16 83 9.0 5.0 7.0 2.0 105 chr3R 22328444 intergenic not near genes chr3R 22328496 intergenic not near genes chr3R 22328549 intergenic not near genes chr3R_16_22325001 chr3R_22325001 KN35_1-HE 2658 chr3R 22328468 22328477 chr3R 22328551 22328560 7 83 5.5 14.0 9.8 0.6 92 chr3R 22328468 intergenic not near genes chr3R 22328514 intergenic not near genes chr3R 22328560 intergenic not near genes chr3R_7_22325001 chr3R_22325001 KN35_1-HE 2659 chr3R 22339575 22339606 chr3R 22339661 22339689 20 89 3.0 6.0 4.5 3.6 114 chr3R 22339575 intron CG5388 - chr3R 22339632 intron CG5388 - chr3R 22339689 intron CG5388 - chr3R_20_22335001 chr3R_22335001 KN35_1-HE 2660 chr3R 22433088 22433101 chr3R 22433189 22433202 12 100 7.0 5.0 6.0 1.7 114 chr3R 22433088 intron CG13847 - chr3R 22433145 intron CG13847 - chr3R 22433202 intron CG13847 - chr3R_12_22430001 chr3R_22430001 KN35_1-HE 2661 chr3R 22450543 22450579 chr3R 22453184 22453220 NOF 22 2641 3.5 3.5 3.5 4.9 2677 chr3R 22450543 intron CG34376 + chr3R 22451882 intron CG34376 + chr3R 22453220 intron CG34376 + chr3R_22_22450001 chr3R_22450001 KN35_1-HE 2662 chr3R 22718753 22718779 chr3R 22718847 22718873 11 94 4.0 5.0 4.5 2.0 120 chr3R 22718753 intron wge - chr3R 22718813 intron wge - chr3R 22718873 intron wge - chr3R_11_22715001 chr3R_22715001 KN35_1-HE 2663 chr3R 22797758 22797938 chr3R 22797845 22798035 40 93 0.0 0.0 0.0 40.0 277 chr3R 22797758 intergenic not near genes chr3R 22797896 intergenic not near genes chr3R 22798035 intergenic not near genes chr3R_40_22795001 chr3R_22795001 KN35_1-HE 2664 chr3R 22821735 22821770 chr3R 22821882 22821917 15 147 3.0 3.5 3.2 3.6 182 chr3R 22821735 intergenic not near genes chr3R 22821826 intergenic not near genes chr3R 22821917 intergenic not near genes chr3R_15_22820001 chr3R_22820001 KN35_1-HE 2665 chr3R 22853296 22853298 chr3R 22853374 22853376 5 78 6.0 12.5 9.2 0.5 80 chr3R 22853296 intergenic not near genes chr3R 22853336 intergenic not near genes chr3R 22853376 intergenic not near genes chr3R_5_22850001 chr3R_22850001 KN35_1-HE 2666 chr3R 22880935 22880960 chr3R 22881074 22881099 11 139 6.0 7.0 6.5 1.5 164 chr3R 22880935 intergenic not near genes chr3R 22881017 intergenic not near genes chr3R 22881099 intergenic not near genes chr3R_11_22880001 chr3R_22880001 KN35_1-HE 2667 chr3R 22881190 22881216 chr3R 22884897 22884923 Doc 11 3707 5.5 1.5 3.5 2.4 3733 chr3R 22881190 intergenic not near genes chr3R 22883056 intergenic not near genes chr3R 22884923 intergenic not near genes chr3R_11_22880001 chr3R_22880001 KN35_1-HE 2668 chr3R 22901275 22901281 chr3R 22901359 22901365 6 84 4.5 10.5 7.5 0.7 90 chr3R 22901275 intron klg + chr3R 22901320 intron klg + chr3R 22901365 intron klg + chr3R_6_22900001 chr3R_22900001 KN35_1-HE 2669 chr3R 22979761 22979779 chr3R 22979843 22979861 10 81 4.5 6.5 5.5 1.5 100 chr3R 22979761 intergenic not near genes chr3R 22979811 intergenic not near genes chr3R 22979861 intergenic not near genes chr3R_10_22975001 chr3R_22975001 KN35_1-HE 2670 chr3R 23019728 23019747 chr3R 23019797 23019831 5 80 1.5 1.5 1.5 2.0 103 chr3R 23019728 intergenic not near genes chr3R 23019780 intergenic not near genes chr3R 23019831 intergenic not near genes chr3R_5_23015001 chr3R_23015001 KN35_1-HE 2671 chr3R 23040463 23040490 chr3R 23040543 23040570 5 80 4.0 4.0 4.0 1.0 107 chr3R 23040463 intergenic CR44226 + chr3R 23040516 intergenic CR44226 + chr3R 23040570 intergenic CR44226 + chr3R_5_23040001 chr3R_23040001 KN35_1-HE 2672 chr3R 23086105 23086134 chr3R 23086237 23086266 17 132 4.0 3.0 3.5 3.8 161 chr3R 23086105 intron CG13830 - chr3R 23086186 intron CG13830 - chr3R 23086266 intron CG13830 - chr3R_17_23085001 chr3R_23085001 KN35_1-HE 2673 chr3R 23110047 23110066 chr3R 23110126 23110127 5 75 0.5 4.0 2.2 1.6 80 chr3R 23110047 intron CG13830 - chr3R 23110087 intron CG13830 - chr3R 23110127 intron CG13830 - chr3R_5_23110001 chr3R_23110001 KN35_1-HE 2674 chr3R 23171790 23171822 chr3R 23171871 23171903 9 81 4.0 4.5 4.2 1.7 113 chr3R 23171790 intron Irk1 + chr3R 23171846 intron Irk1 + chr3R 23171903 intron Irk1 + chr3R_9_23170001 chr3R_23170001 KN35_1-HE 2675 chr3R 23181093 23181101 chr3R 23181178 23181186 6 85 0.5 5.0 2.8 1.6 93 chr3R 23181093 intron Irk1 + chr3R 23181140 intron Irk1 + chr3R 23181186 intron Irk1 + chr3R_6_23180001 chr3R_23180001 KN35_1-HE 2676 chr3R 23182491 23182624 chr3R 23182612 23182706 18 113 0.0 0.0 0.0 18.0 215 chr3R 23182491 intron Irk1 + chr3R 23182598 intron Irk1 + chr3R 23182706 intron Irk1 + chr3R_18_23180001 chr3R_23180001 KN35_1-HE 2677 chr3R 23260959 23260988 chr3R 23261042 23261071 13 83 5.0 4.0 4.5 2.4 112 chr3R 23260959 3` UTR orb - chr3R 23261015 3` UTR orb - chr3R 23261071 3` UTR orb - chr3R_13_23260001 chr3R_23260001 KN35_1-HE 2678 chr3R 23291272 23291308 chr3R 23291361 23291397 19 88 2.0 4.0 3.0 4.8 125 chr3R 23291272 3` UTR pnt - chr3R 23291334 3` UTR pnt - chr3R 23291397 exon pnt - chr3R_19_23290001 chr3R_23290001 KN35_1-HE 2679 chr3R 23316975 23317005 chr3R 23317055 23317085 11 80 7.0 4.0 5.5 1.7 110 chr3R 23316975 intron pnt - chr3R 23317030 intron pnt - chr3R 23317085 intron pnt - chr3R_11_23315001 chr3R_23315001 KN35_1-HE 2680 chr3R 23335431 23335466 chr3R 23335510 23335545 14 79 5.5 3.5 4.5 2.5 114 chr3R 23335431 intron pnt - chr3R 23335488 intron pnt - chr3R 23335545 intron pnt - chr3R_14_23335001 chr3R_23335001 KN35_1-HE 2681 chr3R 23336250 23336283 chr3R 23336329 23336362 17 79 4.0 5.5 4.8 2.9 112 chr3R 23336250 intron pnt - chr3R 23336306 intron pnt - chr3R 23336362 intron pnt - chr3R_17_23335001 chr3R_23335001 KN35_1-HE 2682 chr3R 23337022 23337037 chr3R 23337104 23337119 7 82 9.5 1.5 5.5 1.1 97 chr3R 23337022 intron pnt - chr3R 23337070 intron pnt - chr3R 23337119 intron pnt - chr3R_7_23335001 chr3R_23335001 KN35_1-HE 2683 chr3R 23360180 23360196 chr3R 23360257 23360273 5 77 0.0 5.5 2.8 1.3 93 chr3R 23360180 3` UTR RpS3 + chr3R 23360226 intergenic RpS3 + chr3R 23360273 intergenic RpS3 + chr3R_5_23360001 chr3R_23360001 KN35_1-HE 2684 chr3R 23375274 23375306 chr3R 23375399 23375431 10 125 3.0 5.5 4.2 1.9 157 chr3R 23375274 intergenic not near genes chr3R 23375352 intergenic not near genes chr3R 23375431 intergenic CG4393 - chr3R_10_23375001 chr3R_23375001 KN35_1-HE 2685 chr3R 23546295 23546327 chr3R 23546979 23547011 12 684 31.0 37.0 34.0 0.3 716 chr3R 23546295 intergenic not near genes chr3R 23546653 intergenic not near genes chr3R 23547011 intergenic not near genes chr3R_12_23545001 chr3R_23545001 KN35_1-HE 2686 chr3R 23558397 23558429 chr3R 23560179 23560211 Bari1 19 1782 5.5 10.0 7.8 2.2 1814 chr3R 23558397 intron beat-IV + chr3R 23559304 intron beat-IV + chr3R 23560211 intron beat-IV + chr3R_19_23555001 chr3R_23555001 KN35_1-HE 2687 chr3R 23573629 23573664 chr3R 23573713 23573725 17 81 5.5 3.0 4.2 3.3 96 chr3R 23573629 exon beat-IV + chr3R 23573677 exon beat-IV + chr3R 23573725 exon beat-IV + chr3R_17_23570001 chr3R_23570001 KN35_1-HE 2688 chr3R 23627554 23627642 chr3R 23627626 23627722 14 77 0.0 0.0 0.0 14.0 168 chr3R 23627554 intron CG31145 - chr3R 23627638 intron CG31145 - chr3R 23627722 intron CG31145 - chr3R_14_23625001 chr3R_23625001 KN35_1-HE 2689 chr3R 23684693 23684728 chr3R 23685180 23685215 roo 17 485 2.0 4.0 3.0 4.2 522 chr3R 23684693 exon CG18754 + chr3R 23684954 intron CG18754 + chr3R 23685215 exon CG18754 + chr3R_17_23680001 chr3R_23680001 KN35_1-HE 2690 chr3R 23790063 23790085 chr3R 23790146 23790168 12 83 2.0 8.0 5.0 2.0 105 chr3R 23790063 intron mbc + chr3R 23790116 intron mbc + chr3R 23790168 intron mbc + chr3R_12_23790001 chr3R_23790001 KN35_1-HE 2691 chr3R 23835402 23835424 chr3R 23844553 23844575 roo 11 9151 5.5 0.0 2.8 2.9 9173 chr3R 23835402 intron CG34355 + chr3R 23839988 intron CG34355 + chr3R 23844575 intron CG34355 + chr3R_11_23835001 chr3R_23835001 KN35_1-HE 2692 chr3R 23859040 23859079 chr3R 23859131 23859170 18 91 3.5 7.0 5.2 2.9 130 chr3R 23859040 intergenic not near genes chr3R 23859105 intergenic not near genes chr3R 23859170 intergenic not near genes chr3R_18_23855001 chr3R_23855001 KN35_1-HE 2693 chr3R 23893778 23893817 chr3R 23893883 23893922 20 105 1.5 7.0 4.2 3.8 144 chr3R 23893778 intergenic tbrd-1 -,sba - chr3R 23893850 intergenic sba -,tbrd-1 - chr3R 23893922 intergenic sba - chr3R_20_23890001 chr3R_23890001 KN35_1-HE 2694 chr3R 23907796 23907819 chr3R 23907885 23907908 12 89 3.0 5.5 4.2 2.3 112 chr3R 23907796 intron sba - chr3R 23907852 intron sba - chr3R 23907908 intron sba - chr3R_12_23905001 chr3R_23905001 KN35_1-HE 2695 chr3R 23944909 23944936 chr3R 23944995 23945022 11 86 6.0 2.0 4.0 2.2 113 chr3R 23944909 intron CG12268 - chr3R 23944966 intron CG12268 - chr3R 23945022 exon CG12268 - chr3R_11_23940001 chr3R_23940001 KN35_1-HE 2696 chr3R 23949039 23949074 chr3R 23949117 23949152 18 78 2.0 1.5 1.8 6.4 113 chr3R 23949039 intergenic not near genes chr3R 23949096 intergenic not near genes chr3R 23949152 intergenic not near genes chr3R_18_23945001 chr3R_23945001 KN35_1-HE 2697 chr3R 23970002 23970017 chr3R 23970118 23970133 9 116 0.0 6.5 3.2 2.1 131 chr3R 23970002 intron CG31140 + chr3R 23970068 intron CG31140 + chr3R 23970133 intron CG31140 + chr3R_9_23970001 chr3R_23970001 KN35_1-HE 2698 chr3R 23985754 23985782 chr3R 23985852 23985880 10 98 3.5 1.5 2.5 2.9 126 chr3R 23985754 intron CG13603 - chr3R 23985817 intron CG13603 - chr3R 23985880 exon CG13603 - chr3R_10_23985001 chr3R_23985001 KN35_1-HE 2699 chr3R 24011668 24011678 chr3R 24011752 24011762 6 84 4.0 10.0 7.0 0.8 94 chr3R 24011668 intron KrT95D - chr3R 24011715 intron KrT95D - chr3R 24011762 intron KrT95D - chr3R_6_24010001 chr3R_24010001 KN35_1-HE 2700 chr3R 24021624 24021751 chr3R 24021715 24021965 35 137 0.0 0.0 0.0 35.0 341 chr3R 24021624 intron KrT95D - chr3R 24021794 intron KrT95D - chr3R 24021965 intron KrT95D - chr3R_35_24020001 chr3R_24020001 KN35_1-HE 2701 chr3R 24072082 24072101 chr3R 24072521 24072540 jockey 11 438 11.0 0.5 5.8 1.6 458 chr3R 24072082 intron 4EHP - chr3R 24072311 intron 4EHP - chr3R 24072540 intron 4EHP - chr3R_11_24070001 chr3R_24070001 KN35_1-HE 2702 chr3R 24076915 24076948 chr3R 24078383 24078416 hobo 14 1468 3.5 5.0 4.2 2.7 1501 chr3R 24076915 intron 4EHP - chr3R 24077666 intron 4EHP - chr3R 24078416 intron 4EHP - chr3R_14_24075001 chr3R_24075001 KN35_1-HE 2703 chr3R 24100457 24100485 chr3R 24100553 24100581 11 96 1.5 2.0 1.8 3.9 124 chr3R 24100457 intron 4EHP - chr3R 24100519 intron 4EHP - chr3R 24100581 intron 4EHP - chr3R_11_24100001 chr3R_24100001 KN35_1-HE 2704 chr3R 24186118 24186153 chr3R 24186212 24186247 13 94 2.0 1.5 1.8 4.6 129 chr3R 24186118 intergenic CHORD + chr3R 24186182 intergenic CHORD + chr3R 24186247 intergenic CHORD + chr3R_13_24185001 chr3R_24185001 KN35_1-HE 2705 chr3R 24207215 24207246 chr3R 24212292 24212323 flea 17 5077 6.0 7.5 6.8 2.2 5108 chr3R 24207215 intron twin - chr3R 24209769 intron twin - chr3R 24212323 intron twin - chr3R_17_24205001 chr3R_24205001 KN35_1-HE 2706 chr3R 24282486 24282498 chr3R 24282570 24282582 12 84 6.5 16.0 11.2 1.0 96 chr3R 24282486 intergenic CR45662 - chr3R 24282534 intergenic CR45662 - chr3R 24282582 intergenic CR45662 - chr3R_12_24280001 chr3R_24280001 KN35_1-HE 2707 chr3R 24289959 24289989 chr3R 24290042 24290072 11 83 2.5 1.5 2.0 3.7 113 chr3R 24289959 intergenic CG34290 -,CG6364 + chr3R 24290016 intergenic CG6364 +,CG34290 - chr3R 24290072 intergenic CG6364 +,CG34290 - chr3R_11_24290001 chr3R_24290001 KN35_1-HE 2708 chr3R 24377782 24377802 chr3R 24377905 24377925 11 123 4.0 0.0 2.0 3.7 143 chr3R 24377782 intergenic CG33342 + chr3R 24377854 intergenic CG33342 + chr3R 24377925 intergenic CG33342 + chr3R_11_24375001 chr3R_24375001 KN35_1-HE 2709 chr3R 24431618 24431624 chr3R 24431698 24431704 8 80 8.5 8.5 8.5 0.8 86 chr3R 24431618 intron nAChRalpha1 - chr3R 24431661 intron nAChRalpha1 - chr3R 24431704 intron nAChRalpha1 - chr3R_8_24430001 chr3R_24430001 KN35_1-HE 2710 chr3R 24453500 24453527 chr3R 24453581 24453608 13 81 2.5 5.0 3.8 2.7 108 chr3R 24453500 intron nAChRalpha1 - chr3R 24453554 intron nAChRalpha1 - chr3R 24453608 intron nAChRalpha1 - chr3R_13_24450001 chr3R_24450001 KN35_1-HE 2711 chr3R 24493287 24493311 chr3R 24493518 24493542 BS 17 230 6.5 13.5 10.0 1.5 255 chr3R 24493287 intergenic not near genes chr3R 24493414 intergenic not near genes chr3R 24493542 intergenic not near genes chr3R_17_24490001 chr3R_24490001 KN35_1-HE 2712 chr3R 24507856 24507888 chr3R 24507933 24507965 14 77 2.0 1.5 1.8 5.0 109 chr3R 24507856 intergenic not near genes chr3R 24507910 intergenic not near genes chr3R 24507965 intergenic not near genes chr3R_14_24505001 chr3R_24505001 KN35_1-HE 2713 chr3R 24665385 24665413 chr3R 24665563 24665591 15 178 4.0 9.5 6.8 1.9 206 chr3R 24665385 5` UTR slo + chr3R 24665488 intron slo + chr3R 24665591 intron slo + chr3R_15_24665001 chr3R_24665001 KN35_1-HE 2714 chr3R 24667604 24667630 chr3R 24667682 24667708 12 78 5.0 0.0 2.5 3.4 104 chr3R 24667604 intron slo + chr3R 24667656 intron slo + chr3R 24667708 intron slo + chr3R_12_24665001 chr3R_24665001 KN35_1-HE 2715 chr3R 24730089 24730119 chr3R 24732467 24732498 Doc 6 2379 0.0 0.0 0.0 6.0 2409 chr3R 24730089 intron tok + chr3R 24731294 intron tok + chr3R 24732498 intron tok + chr3R_6_24730001 chr3R_24730001 KN35_1-HE 2716 chr3R 24893464 24893490 chr3R 24893545 24893571 11 81 0.5 3.0 1.8 3.9 107 chr3R 24893464 intron CG31121 - chr3R 24893518 intron CG31121 - chr3R 24893571 intron CG31121 - chr3R_11_24890001 chr3R_24890001 KN35_1-HE 2717 chr3R 24909063 24909091 chr3R 24909171 24909199 13 108 7.0 5.5 6.2 1.8 136 chr3R 24909063 intergenic not near genes chr3R 24909131 intergenic not near genes chr3R 24909199 intergenic not near genes chr3R_13_24905001 chr3R_24905001 KN35_1-HE 2718 chr3R 24925319 24925352 chr3R 24925401 24925435 7 82 2.0 5.0 3.5 1.6 116 chr3R 24925319 5` UTR Trf4-2 + chr3R 24925377 5` UTR Trf4-2 + chr3R 24925435 5` UTR Trf4-2 + chr3R_7_24925001 chr3R_24925001 KN35_1-HE 2719 chr3R 24927120 24927155 chr3R 24931912 24931947 Doc 11 4792 1.5 1.0 1.2 5.0 4827 chr3R 24927120 intergenic Trf4-2 + chr3R 24929534 intergenic not near genes chr3R 24931947 intergenic CG11771 + chr3R_11_24925001 chr3R_24925001 KN35_1-HE 2720 chr3R 25004899 25004920 chr3R 25004983 25005004 11 84 2.0 2.5 2.2 3.4 105 chr3R 25004899 intron tnc + chr3R 25004952 intron tnc + chr3R 25005004 intron tnc + chr3R_11_25000001 chr3R_25000001 KN35_1-HE 2721 chr3R 25027537 25027570 chr3R 25027750 25027784 11 214 4.5 4.0 4.2 2.1 247 chr3R 25027537 intron Hr96 + chr3R 25027660 intron Hr96 + chr3R 25027784 intron Hr96 + chr3R_11_25025001 chr3R_25025001 KN35_1-HE 2722 chr3R 25053147 25053163 chr3R 25053233 25053249 6 86 0.0 5.0 2.5 1.7 102 chr3R 25053147 intergenic CG11791 +,CG31109 - chr3R 25053198 intergenic CG11791 +,CG31109 - chr3R 25053249 intergenic CG31109 -,CG11791 + chr3R_6_25050001 chr3R_25050001 KN35_1-HE 2723 chr3R 25101926 25101962 chr3R 25102007 25102043 11 81 4.0 3.0 3.5 2.4 117 chr3R 25101926 3` UTR,3` UTR CG33095 +,CG33096 + chr3R 25101984 3` UTR,3` UTR CG33095 +,CG33096 + chr3R 25102043 3` UTR,3` UTR CG33095 +,CG33096 + chr3R_11_25100001 chr3R_25100001 KN35_1-HE 2724 chr3R 25239197 25239231 chr3R 25239292 25239326 21 95 5.0 2.0 3.5 4.7 129 chr3R 25239197 intergenic CG11852 + chr3R 25239262 intergenic CG11852 + chr3R 25239326 intergenic CG11852 + chr3R_21_25235001 chr3R_25235001 KN35_1-HE 2725 chr3R 25277676 25277695 chr3R 25277774 25277793 8 98 0.0 6.0 3.0 2.0 117 chr3R 25277676 intergenic CG10513 - chr3R 25277734 intergenic not near genes chr3R 25277793 intergenic not near genes chr3R_8_25275001 chr3R_25275001 KN35_1-HE 2726 chr3R 25310953 25310983 chr3R 25311034 25311064 16 81 6.5 3.5 5.0 2.7 111 chr3R 25310953 intergenic CG31099 -,CG31087 - chr3R 25311008 intergenic CG31087 -,CG31099 - chr3R 25311064 3` UTR CG31087 - chr3R_16_25310001 chr3R_25310001 KN35_1-HE 2727 chr3R 25368475 25368503 chr3R 25368594 25368622 14 119 4.5 0.0 2.2 4.4 147 chr3R 25368475 intron Fur1 - chr3R 25368548 intron Fur1 - chr3R 25368622 intron Fur1 - chr3R_14_25365001 chr3R_25365001 KN35_1-HE 2728 chr3R 25431015 25431050 chr3R 25431414 25431449 12 398 2.0 1.0 1.5 4.8 434 chr3R 25431015 intron Fur1 - chr3R 25431232 intron Fur1 - chr3R 25431449 intron Fur1 - chr3R_12_25430001 chr3R_25430001 KN35_1-HE 2729 chr3R 25441834 25441872 chr3R 25442079 25442117 17 245 6.0 2.5 4.2 3.3 283 chr3R 25441834 intron Fur1 - chr3R 25441976 intron Fur1 - chr3R 25442117 intron Fur1 - chr3R_17_25440001 chr3R_25440001 KN35_1-HE 2730 chr3R 25465054 25465058 chr3R 25465132 25465136 4 78 7.5 0.0 3.8 0.8 82 chr3R 25465054 intron Fur1 - chr3R 25465095 intron Fur1 - chr3R 25465136 intron Fur1 - chr3R_4_25465001 chr3R_25465001 KN35_1-HE 2731 chr3R 25520985 25520992 chr3R 25521085 25521092 4 100 6.5 10.0 8.2 0.4 107 chr3R 25520985 intron msi + chr3R 25521038 intron msi + chr3R 25521092 intron msi + chr3R_4_25520001 chr3R_25520001 KN35_1-HE 2732 chr3R 25529608 25529644 chr3R 25529886 25529922 18 278 0.0 5.0 2.5 5.1 314 chr3R 25529608 intron msi + chr3R 25529765 intron msi + chr3R 25529922 intron msi + chr3R_18_25525001 chr3R_25525001 KN35_1-HE 2733 chr3R 25588320 25588356 chr3R 25588401 25588437 26 81 8.5 4.5 6.5 3.5 117 chr3R 25588320 intron msi + chr3R 25588378 intron msi + chr3R 25588437 intron msi + chr3R_26_25585001 chr3R_25585001 KN35_1-HE 2734 chr3R 25612911 25612937 chr3R 25612989 25613015 8 78 4.5 8.5 6.5 1.1 104 chr3R 25612911 intron Npl4 - chr3R 25612963 intron Npl4 - chr3R 25613015 intron Npl4 - chr3R_8_25610001 chr3R_25610001 KN35_1-HE 2735 chr3R 25669065 25669098 chr3R 25669160 25669193 24 95 3.0 6.0 4.5 4.4 128 chr3R 25669065 intron Lgr3 + chr3R 25669129 intron Lgr3 + chr3R 25669193 exon Lgr3 + chr3R_24_25665001 chr3R_25665001 KN35_1-HE 2736 chr3R 25671243 25671273 chr3R 25671342 25671374 8 100 5.0 7.5 6.2 1.1 131 chr3R 25671243 intron Lgr3 + chr3R 25671308 intron Lgr3 + chr3R 25671374 intron Lgr3 + chr3R_8_25670001 chr3R_25670001 KN35_1-HE 2737 chr3R 18120866 18120870 chr3R 25673379 25673383 4 7552513 10.5 25.0 17.8 0.2 7552517 chr3R 18120866 intron sr + chr3R 21897124 intron CG6678 + chr3R 25673383 intron Lgr3 + chr3R_4_21895001 chr3R_21895001 KN35_1-HE 2738 chr3R 25683848 25683856 chr3R 25683925 25683933 4 77 7.5 0.0 3.8 0.8 85 chr3R 25683848 3` UTR RpL27 - chr3R 25683890 3` UTR RpL27 - chr3R 25683933 3` UTR RpL27 - chr3R_4_25680001 chr3R_25680001 KN35_1-HE 2739 chr3R 25725017 25725043 chr3R 25725224 25725250 12 207 2.0 6.0 4.0 2.4 233 chr3R 25725017 intron LpR2 - chr3R 25725134 intron LpR2 - chr3R 25725250 intron LpR2 - chr3R_12_25725001 chr3R_25725001 KN35_1-HE 2740 chr3R 25725825 25725860 chr3R 25734986 25735021 roo 15 9161 3.0 3.0 3.0 3.8 9196 chr3R 25725825 intron LpR2 - chr3R 25730423 intron LpR2 - chr3R 25735021 intron LpR2 - chr3R_15_25730001 chr3R_25730001 KN35_1-HE 2741 chr3R 25806557 25806564 chr3R 25806636 25806643 10 79 0.0 6.5 3.2 2.4 86 chr3R 25806557 intron BG642167 + chr3R 25806600 intron BG642167 + chr3R 25806643 intron BG642167 + chr3R_10_25805001 chr3R_25805001 KN35_1-HE 2742 chr3R 25832692 25832724 chr3R 25841875 25841907 roo 17 9183 4.0 4.0 4.0 3.4 9215 chr3R 25832692 exon alpha4GT2 + chr3R 25837300 intron alpha4GT2 + chr3R 25841907 exon alpha4GT2 + chr3R_17_25835001 chr3R_25835001 KN35_1-HE 2743 chr3R 25843635 25843647 chr3R 25843766 25843778 5 131 6.0 3.0 4.5 0.9 143 chr3R 25843635 intergenic CR45653 + chr3R 25843706 intergenic CR45653 + chr3R 25843778 intergenic CR45653 + chr3R_5_25840001 chr3R_25840001 KN35_1-HE 2744 chr3R 25848669 25848702 chr3R 25848759 25848792 13 89 2.0 1.0 1.5 5.2 123 chr3R 25848669 intergenic CR45657 + chr3R 25848730 intergenic CR45657 + chr3R 25848792 intergenic CR45657 + chr3R_13_25845001 chr3R_25845001 KN35_1-HE 2745 chr3R 25861829 25861843 chr3R 25861907 25861921 5 78 6.0 3.0 4.5 0.9 92 chr3R 25861829 intron CG5890 + chr3R 25861875 intron CG5890 + chr3R 25861921 intron CG5890 + chr3R_5_25860001 chr3R_25860001 KN35_1-HE 2746 chr3R 25879283 25879312 chr3R 25879376 25879405 14 93 1.5 2.5 2.0 4.7 122 chr3R 25879283 intron Tsp96F - chr3R 25879344 intron Tsp96F - chr3R 25879405 intron Tsp96F - chr3R_14_25875001 chr3R_25875001 KN35_1-HE 2747 chr3R 25907226 25907243 chr3R 25907307 25907324 4 81 3.5 1.0 2.2 1.2 98 chr3R 25907226 intron CG42235 + chr3R 25907275 intron CG42235 + chr3R 25907324 intron CG42235 + chr3R_4_25905001 chr3R_25905001 KN35_1-HE 2748 chr3R 26006909 26006942 chr3R 26007017 26007050 12 106 5.0 4.0 4.5 2.2 141 chr3R 26006909 3` UTR CR45039 - chr3R 26006980 3` UTR CR45039 - chr3R 26007050 3` UTR CR45039 - chr3R_12_26005001 chr3R_26005001 KN35_1-HE 2749 chr3R 26038362 26038397 chr3R 26038449 26038483 7 86 3.5 4.0 3.8 1.5 121 chr3R 26038362 intergenic E(spl)m7-HLH + chr3R 26038422 intergenic E(spl)m7-HLH + chr3R 26038483 intergenic E(spl)m7-HLH + chr3R_7_26035001 chr3R_26035001 KN35_1-HE 2750 chr3R 26071177 26071199 chr3R 26071261 26071283 6 84 2.0 4.0 3.0 1.5 106 chr3R 26071177 3` UTR CR44950 - chr3R 26071230 3` UTR CR44950 - chr3R 26071283 intron CR44950 - chr3R_6_26070001 chr3R_26070001 KN35_1-HE 2751 chr3R 26108823 26108856 chr3R 26117407 26117421 Tirant 13 8582 3.0 0.5 1.8 4.6 8598 chr3R 26108823 5` UTR CG31324 + chr3R 26113122 intron CG31324 + chr3R 26117421 intron CG31324 + chr3R_13_26110001 chr3R_26110001 KN35_1-HE 2752 chr3R 26122463 26122476 chr3R 26122540 26122544 8 74 8.5 2.5 5.5 1.2 81 chr3R 26122463 intron CG31324 + chr3R 26122504 intron CG31324 + chr3R 26122544 intron CG31324 + chr3R_8_26120001 chr3R_26120001 KN35_1-HE 2753 chr3R 26126468 26126497 chr3R 26126623 26126652 12 155 2.5 3.5 3.0 3.0 184 chr3R 26126468 intron CG31324 + chr3R 26126560 intron CG31324 + chr3R 26126652 intron CG31324 + chr3R_12_26125001 chr3R_26125001 KN35_1-HE 2754 chr3R 26151138 26151167 chr3R 26151265 26151293 4 126 2.0 1.5 1.8 1.4 155 chr3R 26151138 intergenic not near genes chr3R 26151216 intergenic not near genes chr3R 26151293 intergenic not near genes chr3R_4_26150001 chr3R_26150001 KN35_1-HE 2755 chr3R 26176867 26176901 chr3R 26177270 26177304 13 403 2.0 2.5 2.2 4.1 437 chr3R 26176867 intron CG31323 + chr3R 26177086 intron CG31323 + chr3R 26177304 intron CG31323 + chr3R_13_26175001 chr3R_26175001 KN35_1-HE 2756 chr3R 26203051 26203081 chr3R 26203388 26203418 8 337 3.5 2.5 3.0 2.0 367 chr3R 26203051 intron CR44320 + chr3R 26203234 intron CR44320 + chr3R 26203418 intron CR44320 + chr3R_8_26200001 chr3R_26200001 KN35_1-HE 2757 chr3R 26215784 26215798 chr3R 26221745 26221759 297 9 5961 5.0 5.0 5.0 1.5 5975 chr3R 26215784 intergenic not near genes chr3R 26218772 intergenic not near genes chr3R 26221759 intergenic not near genes chr3R_9_26215001 chr3R_26215001 KN35_1-HE 2758 chr3R 26292116 26292140 chr3R 26292197 26292221 9 81 3.0 4.5 3.8 1.9 105 chr3R 26292116 intergenic not near genes chr3R 26292168 intergenic not near genes chr3R 26292221 intergenic not near genes chr3R_9_26290001 chr3R_26290001 KN35_1-HE 2759 chr3R 26307068 26307091 chr3R 26307266 26307289 12 198 2.5 1.5 2.0 4.0 221 chr3R 26307068 intergenic not near genes chr3R 26307178 intergenic not near genes chr3R 26307289 intergenic not near genes chr3R_12_26305001 chr3R_26305001 KN35_1-HE 2760 chr3R 26348694 26348729 chr3R 26348775 26348810 17 81 3.5 3.0 3.2 4.0 116 chr3R 26348694 intron CG33970 + chr3R 26348752 intron CG33970 + chr3R 26348810 intron CG33970 + chr3R_17_26345001 chr3R_26345001 KN35_1-HE 2761 chr3R 26370342 26370353 chr3R 26370428 26370439 7 86 0.0 3.0 1.5 2.8 97 chr3R 26370342 intergenic not near genes chr3R 26370390 intergenic not near genes chr3R 26370439 intergenic not near genes chr3R_7_26370001 chr3R_26370001 KN35_1-HE 2762 chr3R 26376321 26376358 chr3R 26385482 26385519 roo 23 9161 2.5 4.5 3.5 5.1 9198 chr3R 26376321 intergenic not near genes chr3R 26380920 intergenic not near genes chr3R 26385519 intergenic not near genes chr3R_23_26380001 chr3R_26380001 KN35_1-HE 2763 chr3R 26405922 26405938 chr3R 26405999 26406015 9 77 4.0 6.0 5.0 1.5 93 chr3R 26405922 intergenic not near genes chr3R 26405968 intergenic not near genes chr3R 26406015 intergenic not near genes chr3R_9_26405001 chr3R_26405001 KN35_1-HE 2764 chr3R 26407470 26407478 chr3R 26407550 26407558 6 80 3.5 0.0 1.8 2.1 88 chr3R 26407470 intergenic not near genes chr3R 26407514 intergenic not near genes chr3R 26407558 intergenic not near genes chr3R_6_26405001 chr3R_26405001 KN35_1-HE 2765 chr3R 26444370 26444380 chr3R 26444449 26444459 5 79 2.0 1.0 1.5 2.0 89 chr3R 26444370 intron tx + chr3R 26444414 intron tx + chr3R 26444459 intron tx + chr3R_5_26440001 chr3R_26440001 KN35_1-HE 2766 chr3R 26460964 26460983 chr3R 26461043 26461062 6 79 3.0 2.5 2.8 1.6 98 chr3R 26460964 3` UTR CG14238 + chr3R 26461013 intergenic CG14238 + chr3R 26461062 intergenic CG14238 +,CG5455 + chr3R_6_26460001 chr3R_26460001 KN35_1-HE 2767 chr3R 26510499 26510534 chr3R 26519561 26519596 roo 24 9062 6.5 8.0 7.2 2.9 9097 chr3R 26510499 intron plum - chr3R 26515048 intron plum - chr3R 26519596 intron,5` UTR plum -,CR45226 + chr3R_24_26515001 chr3R_26515001 KN35_1-HE 2768 chr3R 26558324 26558359 chr3R 26565637 26565672 Stalker4 17 7313 6.5 6.5 6.5 2.3 7348 chr3R 26558324 intron scrib + chr3R 26561998 intron scrib + chr3R 26565672 intron scrib + chr3R_17_26560001 chr3R_26560001 KN35_1-HE 2769 chr3R 26611346 26611376 chr3R 26611423 26611446 8 76 1.0 3.0 2.0 2.7 100 chr3R 26611346 intergenic not near genes chr3R 26611396 intergenic not near genes chr3R 26611446 intergenic not near genes chr3R_8_26610001 chr3R_26610001 KN35_1-HE 2770 chr3R 26641638 26641658 chr3R 26641726 26641746 9 88 6.0 2.5 4.2 1.7 108 chr3R 26641638 intergenic not near genes chr3R 26641692 intergenic not near genes chr3R 26641746 intergenic not near genes chr3R_9_26640001 chr3R_26640001 KN35_1-HE 2771 chr3R 26642730 26642754 chr3R 26643124 26643149 jockey 4 395 4.0 3.0 3.5 0.9 419 chr3R 26642730 intergenic not near genes chr3R 26642940 intergenic not near genes chr3R 26643149 intergenic not near genes chr3R_4_26640001 chr3R_26640001 KN35_1-HE 2772 chr3R 26650036 26650065 chr3R 26650230 26650259 13 194 2.0 3.0 2.5 3.7 223 chr3R 26650036 intron beat-VII - chr3R 26650148 intron beat-VII - chr3R 26650259 intron beat-VII - chr3R_13_26650001 chr3R_26650001 KN35_1-HE 2773 chr3R 26740307 26740321 chr3R 26740384 26740398 8 77 0.0 5.5 2.8 2.1 91 chr3R 26740307 intergenic not near genes chr3R 26740352 intergenic not near genes chr3R 26740398 intergenic not near genes chr3R_8_26740001 chr3R_26740001 KN35_1-HE 2774 chr3R 26770240 26770273 chr3R 26770318 26770351 16 78 3.0 5.5 4.2 3.1 111 chr3R 26770240 intergenic CR45563 + chr3R 26770296 intergenic CR45563 + chr3R 26770351 intergenic not near genes chr3R_16_26770001 chr3R_26770001 KN35_1-HE 2775 chr3R 26781770 26781807 chr3R 26781848 26781885 22 77 3.5 5.0 4.2 4.2 115 chr3R 26781770 intergenic not near genes chr3R 26781828 intergenic not near genes chr3R 26781885 intergenic not near genes chr3R_22_26780001 chr3R_26780001 KN35_1-HE 2776 chr3R 26810550 26810584 chr3R 26811036 26811070 roo 15 486 8.5 8.5 8.5 1.6 520 chr3R 26810550 intron Tl + chr3R 26810810 intron Tl + chr3R 26811070 intron Tl + chr3R_15_26810001 chr3R_26810001 KN35_1-HE 2777 chr3R 26981086 26981117 chr3R 26981172 26981203 11 86 2.0 3.5 2.8 2.9 117 chr3R 26981086 intron CG14253 + chr3R 26981144 intron CG14253 + chr3R 26981203 intron CG14253 + chr3R_11_26980001 chr3R_26980001 KN35_1-HE 2778 chr3R 27007402 27007438 chr3R 27016538 27016574 roo 21 9136 5.0 7.5 6.2 2.9 9172 chr3R 27007402 intron RYa-R + chr3R 27011988 intron RYa-R + chr3R 27016574 intron RYa-R + chr3R_21_27010001 chr3R_27010001 KN35_1-HE 2779 chr3R 27027687 27027705 chr3R 27027770 27027788 12 83 8.5 6.5 7.5 1.4 101 chr3R 27027687 intron RYa-R + chr3R 27027738 intron RYa-R + chr3R 27027788 intron RYa-R + chr3R_12_27025001 chr3R_27025001 KN35_1-HE 2780 chr3R 27028720 27028755 chr3R 27028800 27028835 16 80 4.5 3.0 3.8 3.3 115 chr3R 27028720 intron RYa-R + chr3R 27028778 intron RYa-R + chr3R 27028835 intron RYa-R + chr3R_16_27025001 chr3R_27025001 KN35_1-HE 2781 chr3R 27036399 27036422 chr3R 27036513 27036536 12 114 6.5 0.0 3.2 2.9 137 chr3R 27036399 intron RYa-R + chr3R 27036468 intron RYa-R + chr3R 27036536 intron RYa-R + chr3R_12_27035001 chr3R_27035001 KN35_1-HE 2782 chr3R 27041814 27041842 chr3R 27041905 27041933 13 91 3.0 5.0 4.0 2.6 119 chr3R 27041814 intron RYa-R + chr3R 27041874 intron RYa-R + chr3R 27041933 intron RYa-R + chr3R_13_27040001 chr3R_27040001 KN35_1-HE 2783 chr3R 27133520 27133546 chr3R 27133638 27133664 13 118 3.5 4.5 4.0 2.6 144 chr3R 27133520 intron CG6051 - chr3R 27133592 intron CG6051 - chr3R 27133664 intron CG6051 - chr3R_13_27130001 chr3R_27130001 KN35_1-HE 2784 chr3R 27140512 27140545 chr3R 27148123 27148156 412 17 7611 6.5 6.0 6.2 2.4 7644 chr3R 27140512 intron CG6051 - chr3R 27144334 intron CG6051 - chr3R 27148156 intron CG6051 - chr3R_17_27140001 chr3R_27140001 KN35_1-HE 2785 chr3R 27176615 27176642 chr3R 27176697 27176724 13 82 3.5 1.0 2.2 4.1 109 chr3R 27176615 intron Ser - chr3R 27176670 intron Ser - chr3R 27176724 intron Ser - chr3R_13_27175001 chr3R_27175001 KN35_1-HE 2786 chr3R 27191046 27191079 chr3R 27191142 27191174 11 96 4.0 2.0 3.0 2.8 128 chr3R 27191046 intron Ser - chr3R 27191110 intron Ser - chr3R 27191174 intron Ser - chr3R_11_27190001 chr3R_27190001 KN35_1-HE 2787 chr3R 27292281 27292300 chr3R 27292394 27292413 4 113 0.5 3.0 1.8 1.4 132 chr3R 27292281 intergenic CG3348 - chr3R 27292347 intergenic CG3348 - chr3R 27292413 intergenic CG3348 - chr3R_4_27290001 chr3R_27290001 KN35_1-HE 2788 chr3R 27293742 27293763 chr3R 27293951 27293972 5 209 3.5 1.5 2.5 1.4 230 chr3R 27293742 intergenic not near genes chr3R 27293857 intergenic CG3339 - chr3R 27293972 intergenic CG3339 - chr3R_5_27290001 chr3R_27290001 KN35_1-HE 2789 chr3R 27300862 27300864 chr3R 27300954 27300957 4 93 2.0 2.5 2.2 1.2 95 chr3R 27300862 intron CG3339 - chr3R 27300910 intron CG3339 - chr3R 27300957 intron CG3339 - chr3R_4_27300001 chr3R_27300001 KN35_1-HE 2790 chr3R 27301270 27301307 chr3R 27301358 27301395 17 88 2.0 3.0 2.5 4.9 125 chr3R 27301270 intron CG3339 - chr3R 27301332 intron CG3339 - chr3R 27301395 intron CG3339 - chr3R_17_27300001 chr3R_27300001 KN35_1-HE 2791 chr3R 27329479 27329501 chr3R 27329557 27329579 6 78 2.0 4.5 3.2 1.4 100 chr3R 27329479 intergenic CG3330 - chr3R 27329529 intergenic CG3330 - chr3R 27329579 intergenic CG3330 - chr3R_6_27325001 chr3R_27325001 KN35_1-HE 2792 chr3R 27335948 27335962 chr3R 27336030 27336044 9 82 0.0 0.5 0.2 7.5 96 chr3R 27335948 intergenic not near genes chr3R 27335996 intergenic not near genes chr3R 27336044 intergenic not near genes chr3R_9_27335001 chr3R_27335001 KN35_1-HE 2793 chr3R 27342792 27342824 chr3R 27351374 27351406 Tirant 15 8582 4.5 4.5 4.5 2.7 8614 chr3R 27342792 intron CG42534 + chr3R 27347099 intron CG42534 + chr3R 27351406 intron CG42534 + chr3R_15_27345001 chr3R_27345001 KN35_1-HE 2794 chr3R 27352500 27352525 chr3R 27352779 27352804 6 279 2.5 6.5 4.5 1.1 304 chr3R 27352500 intron CG42534 + chr3R 27352652 intron CG42534 + chr3R 27352804 intron CG42534 + chr3R_6_27350001 chr3R_27350001 KN35_1-HE 2795 chr3R 27364303 27364332 chr3R 27364471 27364500 9 168 4.5 2.5 3.5 2.0 197 chr3R 27364303 exon CG42534 + chr3R 27364402 intron CG42534 + chr3R 27364500 intron CG42534 + chr3R_9_27360001 chr3R_27360001 KN35_1-HE 2796 chr3R 27469255 27469287 chr3R 27469333 27469365 23 78 5.0 2.0 3.5 5.1 110 chr3R 27469255 intergenic not near genes chr3R 27469310 intergenic not near genes chr3R 27469365 intergenic not near genes chr3R_23_27465001 chr3R_27465001 KN35_1-HE 2797 chr3R 27473890 27473923 chr3R 27473969 27474002 19 79 6.0 3.0 4.5 3.5 112 chr3R 27473890 intergenic not near genes chr3R 27473946 intergenic not near genes chr3R 27474002 intergenic not near genes chr3R_19_27470001 chr3R_27470001 KN35_1-HE 2798 chr3R 27492378 27492391 chr3R 27492466 27492479 7 88 7.5 0.5 4.0 1.4 101 chr3R 27492378 intergenic not near genes chr3R 27492428 intergenic not near genes chr3R 27492479 intergenic not near genes chr3R_7_27490001 chr3R_27490001 KN35_1-HE 2799 chr3R 27492394 27492410 chr3R 27492482 27492498 11 88 3.0 0.5 1.8 3.9 104 chr3R 27492394 intergenic not near genes chr3R 27492446 intergenic not near genes chr3R 27492498 intergenic not near genes chr3R_11_27490001 chr3R_27490001 KN35_1-HE 2800 chr3R 27493634 27493662 chr3R 27493716 27493744 17 82 4.0 11.5 7.8 1.9 110 chr3R 27493634 intergenic not near genes chr3R 27493689 intergenic not near genes chr3R 27493744 intergenic not near genes chr3R_17_27490001 chr3R_27490001 KN35_1-HE 2801 chr3R 27521157 27521187 chr3R 27530367 27530397 roo 8 9210 1.5 5.0 3.2 1.9 9240 chr3R 27521157 intron CG12885 + chr3R 27525777 intron CG12885 + chr3R 27530397 intron CG12885 + chr3R_8_27525001 chr3R_27525001 KN35_1-HE 2802 chr3R 27648840 27648870 chr3R 27648918 27648948 14 78 5.0 4.0 4.5 2.5 108 chr3R 27648840 intron tau - chr3R 27648894 intron tau - chr3R 27648948 intron tau - chr3R_14_27645001 chr3R_27645001 KN35_1-HE 2803 chr3R 27654536 27654573 chr3R 27654620 27654657 18 84 3.5 6.0 4.8 3.1 121 chr3R 27654536 intron tau - chr3R 27654596 intron tau - chr3R 27654657 intron tau - chr3R_18_27650001 chr3R_27650001 KN35_1-HE 2804 chr3R 27703431 27703453 chr3R 27703513 27703535 9 82 2.0 0.0 1.0 4.5 104 chr3R 27703431 3` UTR,3` UTR btz +,CG12428 - chr3R 27703483 3` UTR CG12428 - chr3R 27703535 3` UTR CG12428 - chr3R_9_27700001 chr3R_27700001 KN35_1-HE 2805 chr3R 27705356 27705387 chr3R 27705436 27705468 17 79 3.0 2.5 2.8 4.5 112 chr3R 27705356 exon CG12428 - chr3R 27705412 intron CG12428 - chr3R 27705468 exon CG12428 - chr3R_17_27705001 chr3R_27705001 KN35_1-HE 2806 chr3R 27709359 27709380 chr3R 27709437 27709458 10 78 4.5 3.5 4.0 2.0 99 chr3R 27709359 exon CG12877 + chr3R 27709408 intron CG12877 + chr3R 27709458 intron CG12877 + chr3R_10_27705001 chr3R_27705001 KN35_1-HE 2807 chr3R 27743555 27743563 chr3R 27743644 27743652 10 89 7.0 1.0 4.0 2.0 97 chr3R 27743555 intron Ets98B + chr3R 27743604 intron Ets98B + chr3R 27743652 intron Ets98B + chr3R_10_27740001 chr3R_27740001 KN35_1-HE 2808 chr3R 27760128 27760160 chr3R 27760234 27760266 24 106 3.5 1.5 2.5 6.9 138 chr3R 27760128 intergenic not near genes chr3R 27760197 intergenic not near genes chr3R 27760266 intergenic not near genes chr3R_24_27760001 chr3R_27760001 KN35_1-HE 2809 chr3R 27779269 27779286 chr3R 27779350 27779367 11 81 7.0 13.0 10.0 1.0 98 chr3R 27779269 exon CG34353 - chr3R 27779318 intron CG34353 - chr3R 27779367 intron CG34353 - chr3R_11_27775001 chr3R_27775001 KN35_1-HE 2810 chr3R 27799939 27799963 chr3R 27800022 27800046 18 83 4.5 3.5 4.0 3.6 107 chr3R 27799939 intron CG34353 - chr3R 27799992 intron CG34353 - chr3R 27800046 intron CG34353 - chr3R_18_27795001 chr3R_27795001 KN35_1-HE 2811 chr3R 27829899 27829915 chr3R 27829979 27829995 14 80 8.5 0.0 4.2 2.7 96 chr3R 27829899 intron CG34353 - chr3R 27829947 intron CG34353 - chr3R 27829995 intron CG34353 - chr3R_14_27825001 chr3R_27825001 KN35_1-HE 2812 chr3R 27840252 27840256 chr3R 27840375 27840379 4 123 9.0 0.0 4.5 0.7 127 chr3R 27840252 intron CG34353 - chr3R 27840316 intron CG34353 - chr3R 27840379 intron CG34353 - chr3R_4_27840001 chr3R_27840001 KN35_1-HE 2813 chr3R 27847502 27847532 chr3R 27847579 27847609 19 77 3.5 8.5 6.0 2.7 107 chr3R 27847502 intron CG34353 - chr3R 27847556 intron CG34353 - chr3R 27847609 intron CG34353 - chr3R_19_27845001 chr3R_27845001 KN35_1-HE 2814 chr3R 27856759 27856791 chr3R 27858243 27858275 hopper2 18 1484 8.5 7.5 8.0 2.0 1516 chr3R 27856759 intron CG34353 - chr3R 27857517 intron CG34353 - chr3R 27858275 intron CG34353 - chr3R_18_27855001 chr3R_27855001 KN35_1-HE 2815 chr3R 27862952 27862957 chr3R 27868259 27868264 Transpac 4 5307 0.0 6.5 3.2 1.0 5312 chr3R 27862952 intron CG34353 - chr3R 27865608 intron CG34353 - chr3R 27868264 intron CG34353 - chr3R_4_27865001 chr3R_27865001 KN35_1-HE 2816 chr3R 27875697 27875733 chr3R 27882753 27882789 297 19 7056 7.0 9.5 8.2 2.1 7092 chr3R 27875697 intron CG34353 - chr3R 27879243 intron CG34353 - chr3R 27882789 intron CG34353 - chr3R_19_27875001 chr3R_27875001 KN35_1-HE 2817 chr3R 27943241 27943264 chr3R 27943341 27943364 9 100 1.0 4.0 2.5 2.6 123 chr3R 27943241 3` UTR mfrn - chr3R 27943302 3` UTR mfrn - chr3R 27943364 3` UTR mfrn - chr3R_9_27940001 chr3R_27940001 KN35_1-HE 2818 chr3R 27970837 27970849 chr3R 27970928 27970933 8 90 6.5 4.5 5.5 1.2 96 chr3R 27970837 intron betaTub97EF - chr3R 27970885 intron betaTub97EF - chr3R 27970933 intron betaTub97EF - chr3R_8_27970001 chr3R_27970001 KN35_1-HE 2819 chr3R 27989000 27989018 chr3R 27989137 27989155 7 137 3.0 2.0 2.5 2.0 155 chr3R 27989000 intergenic not near genes chr3R 27989078 intergenic not near genes chr3R 27989155 intergenic not near genes chr3R_7_27985001 chr3R_27985001 KN35_1-HE 2820 chr3R 28058374 28058413 chr3R 28058454 28058493 7 80 3.0 2.0 2.5 2.0 119 chr3R 28058374 intron CG34362 + chr3R 28058434 intron CG34362 + chr3R 28058493 intron CG34362 + chr3R_7_28055001 chr3R_28055001 KN35_1-HE 2821 chr3R 28068494 28068525 chr3R 28073937 28073968 I-element 9 5443 1.0 6.0 3.5 2.0 5474 chr3R 28068494 intron CG34362 + chr3R 28071231 intron CG34362 + chr3R 28073968 intron CG34362 + chr3R_9_28070001 chr3R_28070001 KN35_1-HE 2822 chr3R 28131427 28131452 chr3R 28131610 28131635 14 183 7.5 2.0 4.8 2.4 208 chr3R 28131427 intergenic not near genes chr3R 28131531 intergenic not near genes chr3R 28131635 intergenic not near genes chr3R_14_28130001 chr3R_28130001 KN35_1-HE 2823 chr3R 28173671 28173686 chr3R 28181102 28181117 mdg1 8 7431 3.5 2.5 3.0 2.0 7446 chr3R 28173671 intron CG34354 + chr3R 28177394 intron CG34354 + chr3R 28181117 intron CG34354 + chr3R_8_28175001 chr3R_28175001 KN35_1-HE 2824 chr3R 28203200 28203232 chr3R 28203325 28203358 17 124 4.0 4.0 4.0 3.4 158 chr3R 28203200 intron CG34354 + chr3R 28203279 intron CG34354 + chr3R 28203358 intron CG34354 + chr3R_17_28200001 chr3R_28200001 KN35_1-HE 2825 chr3R 28214849 28214880 chr3R 28215195 28215226 13 346 1.5 2.5 2.0 4.3 377 chr3R 28214849 intron CG34354 + chr3R 28215038 intron CG34354 + chr3R 28215226 intron CG34354 + chr3R_13_28215001 chr3R_28215001 KN35_1-HE 2826 chr3R 28253340 28253371 chr3R 28255851 28255882 jockey 16 2511 3.0 6.0 4.5 2.9 2542 chr3R 28253340 intergenic not near genes chr3R 28254611 intergenic not near genes chr3R 28255882 intergenic not near genes chr3R_16_28250001 chr3R_28250001 KN35_1-HE 2827 chr3R 28260424 28260459 chr3R 28260511 28260546 11 87 3.0 3.5 3.2 2.6 122 chr3R 28260424 intergenic not near genes chr3R 28260485 intergenic not near genes chr3R 28260546 intergenic not near genes chr3R_11_28260001 chr3R_28260001 KN35_1-HE 2828 chr3R 28299308 28299340 chr3R 28299568 28299600 15 260 2.0 5.5 3.8 3.1 292 chr3R 28299308 intergenic not near genes chr3R 28299454 intergenic not near genes chr3R 28299600 intergenic not near genes chr3R_15_28295001 chr3R_28295001 KN35_1-HE 2829 chr3R 28345647 28345675 chr3R 28345724 28345752 12 77 4.5 3.5 4.0 2.4 105 chr3R 28345647 intergenic Moca-cyp + chr3R 28345700 intergenic not near genes chr3R 28345752 intergenic not near genes chr3R_12_28345001 chr3R_28345001 KN35_1-HE 2830 chr3R 28346240 28346248 chr3R 28346319 28346327 7 79 0.0 11.5 5.8 1.0 87 chr3R 28346240 intergenic not near genes chr3R 28346284 intergenic not near genes chr3R 28346327 intergenic not near genes chr3R_7_28345001 chr3R_28345001 KN35_1-HE 2831 chr3R 28353424 28353455 chr3R 28353533 28353564 9 109 6.5 4.5 5.5 1.4 140 chr3R 28353424 exon Or98b + chr3R 28353494 exon Or98b + chr3R 28353564 intergenic Or98b + chr3R_9_28350001 chr3R_28350001 KN35_1-HE 2832 chr3R 28419537 28419558 chr3R 28419609 28419646 8 83 4.5 5.0 4.8 1.4 109 chr3R 28419537 intron beat-VI + chr3R 28419592 intron beat-VI + chr3R 28419646 intron beat-VI + chr3R_8_28415001 chr3R_28415001 KN35_1-HE 2833 chr3R 28431508 28431544 chr3R 28431595 28431631 18 87 2.5 7.5 5.0 3.0 123 chr3R 28431508 intron beat-VI + chr3R 28431570 intron beat-VI + chr3R 28431631 intron beat-VI + chr3R_18_28430001 chr3R_28430001 KN35_1-HE 2834 chr3R 28646623 28646638 chr3R 28646982 28646997 6 358 7.0 5.0 6.0 0.9 374 chr3R 28646623 intergenic not near genes chr3R 28646810 intergenic not near genes chr3R 28646997 intergenic not near genes chr3R_6_28645001 chr3R_28645001 KN35_1-HE 2835 chr3R 28732654 28732667 chr3R 28732738 28732751 4 84 4.0 4.0 4.0 0.8 97 chr3R 28732654 intron htt + chr3R 28732702 intron htt + chr3R 28732751 intron htt + chr3R_4_28730001 chr3R_28730001 KN35_1-HE 2836 chr3R 28742484 28742512 chr3R 28742561 28742589 19 77 4.0 6.0 5.0 3.2 105 chr3R 28742484 intron AstA-R2 - chr3R 28742536 intron AstA-R2 - chr3R 28742589 intron AstA-R2 - chr3R_19_28740001 chr3R_28740001 KN35_1-HE 2837 chr3R 28758288 28758304 chr3R 28763906 28763922 roo 7 5618 8.5 0.5 4.5 1.3 5634 chr3R 28758288 intergenic aqrs - chr3R 28761105 intergenic not near genes chr3R 28763922 intergenic not near genes chr3R_7_28760001 chr3R_28760001 KN35_1-HE 2838 chr3R 28763901 28763922 chr3R 28771345 28771366 Stalker4 14 7444 0.0 1.5 0.8 7.8 7465 chr3R 28763901 intergenic not near genes chr3R 28767634 intergenic not near genes chr3R 28771366 intergenic not near genes chr3R_14_28765001 chr3R_28765001 KN35_1-HE 2839 chr3R 28781810 28781842 chr3R 28781891 28781923 12 81 3.5 4.0 3.8 2.5 113 chr3R 28781810 intergenic not near genes chr3R 28781866 intergenic not near genes chr3R 28781923 intergenic not near genes chr3R_12_28780001 chr3R_28780001 KN35_1-HE 2840 chr3R 28792877 28792904 chr3R 28797973 28798000 jockey 7 5096 2.0 5.5 3.8 1.5 5123 chr3R 28792877 intergenic not near genes chr3R 28795438 intergenic not near genes chr3R 28798000 intergenic not near genes chr3R_7_28795001 chr3R_28795001 KN35_1-HE 2841 chr3R 28800275 28800294 chr3R 28800355 28800374 5 80 0.5 3.5 2.0 1.7 99 chr3R 28800275 intergenic not near genes chr3R 28800324 intergenic not near genes chr3R 28800374 intergenic not near genes chr3R_5_28800001 chr3R_28800001 KN35_1-HE 2842 chr3R 28803267 28803293 chr3R 28803413 28803439 8 146 5.0 5.5 5.2 1.3 172 chr3R 28803267 intergenic not near genes chr3R 28803353 intergenic not near genes chr3R 28803439 intergenic not near genes chr3R_8_28800001 chr3R_28800001 KN35_1-HE 2843 chr3R 28829527 28829542 chr3R 28829617 28829632 9 88 2.0 0.0 1.0 4.5 105 chr3R 28829527 intron WASp - chr3R 28829580 intron WASp - chr3R 28829632 intron WASp - chr3R_9_28825001 chr3R_28825001 KN35_1-HE 2844 chr3R 28960508 28960526 chr3R 28960594 28960612 8 86 4.5 2.0 3.2 1.9 104 chr3R 28960508 intron CG14521 - chr3R 28960560 intron CG14521 - chr3R 28960612 intron CG14521 - chr3R_8_28960001 chr3R_28960001 KN35_1-HE 2845 chr3R 29032742 29032771 chr3R 29032820 29032849 8 78 3.0 2.0 2.5 2.3 107 chr3R 29032742 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032796 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032849 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R_8_29030001 chr3R_29030001 KN35_1-HE 2846 chr3R 29070054 29070079 chr3R 29070136 29070161 10 82 2.5 3.0 2.8 2.6 107 chr3R 29070054 intron CG11873 + chr3R 29070108 intron CG11873 + chr3R 29070161 intron CG11873 + chr3R_10_29070001 chr3R_29070001 KN35_1-HE 2847 chr3R 29079377 29079411 chr3R 29080750 29080784 NOF 16 1373 7.5 9.5 8.5 1.7 1407 chr3R 29079377 intron CG11873 + chr3R 29080080 intron CG11873 + chr3R 29080784 intron CG11873 + chr3R_16_29080001 chr3R_29080001 KN35_1-HE 2848 chr3R 29176130 29176140 chr3R 29176220 29176230 4 90 9.5 4.0 6.8 0.5 100 chr3R 29176130 intron CG14509 - chr3R 29176180 intron CG14509 - chr3R 29176230 intron CG14509 - chr3R_4_29175001 chr3R_29175001 KN35_1-HE 2849 chr3R 29237261 29237279 chr3R 29239283 29239301 4 2022 16.0 4.5 10.2 0.4 2040 chr3R 29237261 exon CG11951 - chr3R 29238281 intron CG11951 - chr3R 29239301 exon CG31427 - chr3R_4_29235001 chr3R_29235001 KN35_1-HE 2850 chr3R 29240490 29240505 chr3R 29240575 29240590 4 85 0.5 2.5 1.5 1.6 100 chr3R 29240490 intergenic CG31445 -,CG31427 - chr3R 29240540 intergenic CG31445 -,CG31427 - chr3R 29240590 3` UTR CG31445 - chr3R_4_29240001 chr3R_29240001 KN35_1-HE 2851 chr3R 29294902 29294938 chr3R 29294980 29295016 21 76 5.0 7.0 6.0 3.0 114 chr3R 29294902 3` UTR CG14506 - chr3R 29294959 3` UTR CG14506 - chr3R 29295016 3` UTR CG14506 - chr3R_21_29290001 chr3R_29290001 KN35_1-HE 2852 chr3R 29319820 29319859 chr3R 29320140 29320178 jockey 14 320 3.0 3.0 3.0 3.5 358 chr3R 29319820 intergenic Cnx99A - chr3R 29319999 intergenic Cnx99A - chr3R 29320178 intergenic not near genes chr3R_14_29315001 chr3R_29315001 KN35_1-HE 2853 chr3R 29334230 29334243 chr3R 29334308 29334321 12 78 13.5 16.0 14.8 0.8 91 chr3R 29334230 intergenic not near genes chr3R 29334276 intergenic not near genes chr3R 29334321 intergenic not near genes chr3R_12_29330001 chr3R_29330001 KN35_1-HE 2854 chr3R 29356064 29356082 chr3R 29356146 29356164 12 82 3.5 7.0 5.2 1.9 100 chr3R 29356064 intergenic CR45547 - chr3R 29356114 intergenic CR45547 - chr3R 29356164 3` UTR CR45547 - chr3R_12_29355001 chr3R_29355001 KN35_1-HE 2855 chr3R 29371360 29371368 chr3R 29371442 29371450 4 82 14.0 4.0 9.0 0.4 90 chr3R 29371360 intergenic not near genes chr3R 29371405 intergenic not near genes chr3R 29371450 intergenic not near genes chr3R_4_29370001 chr3R_29370001 KN35_1-HE 2856 chr3R 29371372 29371391 chr3R 29371441 29371474 10 81 5.0 3.5 4.2 1.9 102 chr3R 29371372 intergenic not near genes chr3R 29371423 intergenic not near genes chr3R 29371474 intergenic not near genes chr3R_10_29370001 chr3R_29370001 KN35_1-HE 2857 chr3R 29375985 29376230 chr3R 29376068 29376307 16 79 0.0 5.5 2.8 4.2 322 chr3R 29375985 intergenic not near genes chr3R 29376146 intergenic not near genes chr3R 29376307 intergenic not near genes chr3R_16_29375001 chr3R_29375001 KN35_1-HE 2858 chr3R 29406625 29406649 chr3R 29407898 29407936 jockey 6 1280 3.5 7.0 5.2 1.0 1311 chr3R 29406625 intron Ptp99A + chr3R 29407280 intron Ptp99A + chr3R 29407936 intron Ptp99A + chr3R_6_29405001 chr3R_29405001 KN35_1-HE 2859 chr3R 29429786 29429804 chr3R 29429865 29429883 4 79 1.5 3.5 2.5 1.1 97 chr3R 29429786 intron Ptp99A + chr3R 29429834 intron Ptp99A + chr3R 29429883 intron Ptp99A + chr3R_4_29425001 chr3R_29425001 KN35_1-HE 2860 chr3R 29447822 29447834 chr3R 29447930 29447942 7 106 7.0 3.5 5.2 1.1 120 chr3R 29447822 intron Ptp99A + chr3R 29447882 intron Ptp99A + chr3R 29447942 intron Ptp99A + chr3R_7_29445001 chr3R_29445001 KN35_1-HE 2861 chr3R 29449354 29449388 chr3R 29449433 29449467 19 79 5.5 5.0 5.2 3.1 113 chr3R 29449354 intron Ptp99A + chr3R 29449410 intron Ptp99A + chr3R 29449467 intron Ptp99A + chr3R_19_29445001 chr3R_29445001 KN35_1-HE 2862 chr3R 29472316 29472330 chr3R 29472403 29472417 5 87 5.5 3.5 4.5 0.9 101 chr3R 29472316 intron Ptp99A + chr3R 29472366 intron Ptp99A + chr3R 29472417 intron Ptp99A + chr3R_5_29470001 chr3R_29470001 KN35_1-HE 2863 chr3R 29472332 29472347 chr3R 29472401 29472434 5 83 1.5 3.0 2.2 1.6 102 chr3R 29472332 intron Ptp99A + chr3R 29472383 intron Ptp99A + chr3R 29472434 intron Ptp99A + chr3R_5_29470001 chr3R_29470001 KN35_1-HE 2864 chr3R 29583878 29583905 chr3R 29583956 29583976 11 77 5.0 1.5 3.2 2.6 98 chr3R 29583878 intergenic not near genes chr3R 29583927 intergenic not near genes chr3R 29583976 intergenic not near genes chr3R_11_29580001 chr3R_29580001 KN35_1-HE 2865 chr3R 29655650 29655674 chr3R 29655730 29655754 12 80 4.5 0.5 2.5 3.4 104 chr3R 29655650 intron Dop1R2 - chr3R 29655702 intron Dop1R2 - chr3R 29655754 intron Dop1R2 - chr3R_12_29655001 chr3R_29655001 KN35_1-HE 2866 chr3R 29691968 29692005 chr3R 29692047 29692084 16 79 3.0 2.5 2.8 4.2 116 chr3R 29691968 intergenic not near genes chr3R 29692026 intergenic not near genes chr3R 29692084 intergenic not near genes chr3R_16_29690001 chr3R_29690001 KN35_1-HE 2867 chr3R 28240551 28240553 chr3R 29701551 29701553 4 1461000 15.0 15.0 15.0 0.2 1461002 chr3R 28240551 intergenic CG34354 + chr3R 28971052 5` UTR CR45669 + chr3R 29701553 intergenic not near genes chr3R_4_28970001 chr3R_28970001 KN35_1-HE 2868 chr3R 29719401 29719427 chr3R 29719488 29719514 11 87 9.0 5.5 7.2 1.3 113 chr3R 29719401 intron CG15506 + chr3R 29719458 intron CG15506 + chr3R 29719514 intron CG15506 + chr3R_11_29715001 chr3R_29715001 KN35_1-HE 2869 chr3R 29738261 29738297 chr3R 29739729 29739765 hobo 10 1468 3.5 5.0 4.2 1.9 1504 chr3R 29738261 intergenic CG1969 +,CG7598 + chr3R 29739013 intron CG1969 + chr3R 29739765 5` UTR CG1969 + chr3R_10_29735001 chr3R_29735001 KN35_1-HE 2870 chr3R 29760155 29760171 chr3R 29760243 29760259 5 88 23.0 28.0 25.5 0.2 104 chr3R 29760155 intergenic not near genes chr3R 29760207 intergenic not near genes chr3R 29760259 intergenic not near genes chr3R_5_29760001 chr3R_29760001 KN35_1-HE 2871 chr3R 29768475 29768600 chr3R 29768568 29768677 13 86 0.0 0.5 0.2 10.8 202 chr3R 29768475 intron kay + chr3R 29768576 intron kay + chr3R 29768677 intron kay + chr3R_13_29765001 chr3R_29765001 KN35_1-HE 2872 chr3R 29773873 29773905 chr3R 29773965 29773974 19 90 4.0 0.5 2.2 5.9 101 chr3R 29773873 intron kay + chr3R 29773924 intron kay + chr3R 29773974 intron kay + chr3R_19_29770001 chr3R_29770001 KN35_1-HE 2873 chr3R 29843879 29843890 chr3R 29843960 29843971 9 81 6.5 6.0 6.2 1.2 92 chr3R 29843879 intron Cad99C + chr3R 29843925 intron Cad99C + chr3R 29843971 intron Cad99C + chr3R_9_29840001 chr3R_29840001 KN35_1-HE 2874 chr3R 29854826 29854858 chr3R 29854907 29854939 12 81 3.0 3.5 3.2 2.9 113 chr3R 29854826 3` UTR dgt1 - chr3R 29854882 exon dgt1 - chr3R 29854939 exon dgt1 - chr3R_12_29850001 chr3R_29850001 KN35_1-HE 2875 chr3R 29882019 29882040 chr3R 29891177 29891198 roo 12 9158 6.0 2.5 4.2 2.3 9179 chr3R 29882019 intron CG31038 + chr3R 29886608 intron CG31038 + chr3R 29891198 intron CG31038 + chr3R_12_29885001 chr3R_29885001 KN35_1-HE 2876 chr3R 29966061 29966069 chr3R 29966139 29966147 7 78 4.5 12.0 8.2 0.8 86 chr3R 29966061 intron TkR99D - chr3R 29966104 intron TkR99D - chr3R 29966147 intron TkR99D - chr3R_7_29965001 chr3R_29965001 KN35_1-HE 2877 chr3R 30026973 30027271 chr3R 30027052 30027349 6 78 0.5 0.0 0.2 5.0 376 chr3R 30026973 intron Axn + chr3R 30027161 intron Axn + chr3R 30027349 intron Axn + chr3R_6_30025001 chr3R_30025001 KN35_1-HE 2878 chr3R 30027277 30027285 chr3R 30027340 30027363 6 74 0.5 7.5 4.0 1.2 86 chr3R 30027277 intron Axn + chr3R 30027320 intron Axn + chr3R 30027363 intron Axn + chr3R_6_30025001 chr3R_30025001 KN35_1-HE 2879 chr3R 30032161 30032177 chr3R 30032241 30032257 11 80 7.0 3.0 5.0 1.8 96 chr3R 30032161 intron Axn + chr3R 30032209 intron Axn + chr3R 30032257 intron Axn + chr3R_11_30030001 chr3R_30030001 KN35_1-HE 2880 chr3R 30056304 30056340 chr3R 30056397 30056433 10 93 1.0 2.5 1.8 3.6 129 chr3R 30056304 exon CG15526 + chr3R 30056368 exon CG15526 + chr3R 30056433 exon CG15526 + chr3R_10_30055001 chr3R_30055001 KN35_1-HE 2881 chr3R 30075194 30075229 chr3R 30075276 30075311 27 82 5.5 9.0 7.2 3.3 117 chr3R 30075194 intron sima + chr3R 30075252 intron sima + chr3R 30075311 intron sima + chr3R_27_30075001 chr3R_30075001 KN35_1-HE 2882 chr3R 30082986 30083015 chr3R 30083063 30083092 18 77 5.5 2.0 3.8 3.8 106 chr3R 30082986 intron sima + chr3R 30083039 intron sima + chr3R 30083092 intron sima + chr3R_18_30080001 chr3R_30080001 KN35_1-HE 2883 chr3R 30084846 30084883 chr3R 30086314 30086351 hobo 12 1468 4.0 2.5 3.2 2.9 1505 chr3R 30084846 intron sima + chr3R 30085598 intron sima + chr3R 30086351 intron sima + chr3R_12_30085001 chr3R_30085001 KN35_1-HE 2884 chr3R 30097627 30097662 chr3R 30097767 30097802 22 140 4.5 5.0 4.8 3.8 175 chr3R 30097627 intron sima + chr3R 30097714 intron sima + chr3R 30097802 intron sima + chr3R_22_30095001 chr3R_30095001 KN35_1-HE 2885 chr3R 30211532 30211545 chr3R 30211611 30211624 7 79 0.0 1.0 0.5 4.7 92 chr3R 30211532 intergenic CecA1 + chr3R 30211578 intergenic CecA1 + chr3R 30211624 intergenic CecA1 + chr3R_7_30210001 chr3R_30210001 KN35_1-HE 2886 chr3R 30267978 30268003 chr3R 30268060 30268090 10 86 3.0 5.5 4.2 1.9 112 chr3R 30267978 intergenic not near genes chr3R 30268034 intergenic not near genes chr3R 30268090 intergenic not near genes chr3R_10_30265001 chr3R_30265001 KN35_1-HE 2887 chr3R 30271065 30271081 chr3R 30271152 30271160 10 85 6.0 4.0 5.0 1.7 95 chr3R 30271065 intergenic not near genes chr3R 30271112 intergenic not near genes chr3R 30271160 intergenic not near genes chr3R_10_30270001 chr3R_30270001 KN35_1-HE 2888 chr3R 30298548 30298574 chr3R 30298640 30298666 13 91 0.0 8.0 4.0 2.6 118 chr3R 30298548 intron hdc + chr3R 30298607 intron hdc + chr3R 30298666 intron hdc + chr3R_13_30295001 chr3R_30295001 KN35_1-HE 2889 chr3R 30317327 30317359 chr3R 30324920 30324952 roo 14 7593 0.5 2.5 1.5 5.6 7625 chr3R 30317327 intron hdc + chr3R 30321140 intron hdc + chr3R 30324952 intron hdc + chr3R_14_30320001 chr3R_30320001 KN35_1-HE 2890 chr3R 30330489 30330523 chr3R 30330570 30330601 26 80 0.0 3.5 1.8 9.3 112 chr3R 30330489 intron hdc + chr3R 30330545 intron hdc + chr3R 30330601 intron hdc + chr3R_26_30330001 chr3R_30330001 KN35_1-HE 2891 chr3R 30340303 30340310 chr3R 30340408 30340415 4 105 0.0 7.5 3.8 0.8 112 chr3R 30340303 intron hdc + chr3R 30340359 intron hdc + chr3R 30340415 intron hdc + chr3R_4_30340001 chr3R_30340001 KN35_1-HE 2892 chr3R 30375542 30375569 chr3R 30383168 30383195 412 9 7626 7.5 8.0 7.8 1.0 7653 chr3R 30375542 intergenic not near genes chr3R 30379368 intergenic not near genes chr3R 30383195 intergenic not near genes chr3R_9_30375001 chr3R_30375001 KN35_1-HE 2893 chr3R 30413058 30413092 chr3R 30413136 30413170 12 78 5.5 5.5 5.5 1.8 112 chr3R 30413058 intergenic not near genes chr3R 30413114 intergenic not near genes chr3R 30413170 intergenic not near genes chr3R_12_30410001 chr3R_30410001 KN35_1-HE 2894 chr3R 30422943 30422974 chr3R 30423035 30423073 10 97 3.5 1.5 2.5 2.9 130 chr3R 30422943 5` UTR,5` UTR CG2217 -,CG42740 - chr3R 30423008 intergenic CG15535 -,CG2217 -,CG42740 - chr3R 30423073 3` UTR CG15535 - chr3R_10_30420001 chr3R_30420001 KN35_1-HE 2895 chr3R 30480497 30480511 chr3R 30482966 30482980 jockey 6 2469 2.5 4.5 3.5 1.3 2483 chr3R 30480497 intron PH4alphaEFB + chr3R 30481738 intron PH4alphaEFB + chr3R 30482980 intron PH4alphaEFB + chr3R_6_30480001 chr3R_30480001 KN35_1-HE 2896 chr3R 30485041 30485070 chr3R 30485118 30485147 11 77 2.0 5.0 3.5 2.4 106 chr3R 30485041 intron PH4alphaEFB + chr3R 30485094 intron PH4alphaEFB + chr3R 30485147 intron PH4alphaEFB + chr3R_11_30485001 chr3R_30485001 KN35_1-HE 2897 chr3R 30499687 30499709 chr3R 30499765 30499787 8 78 4.0 4.0 4.0 1.6 100 chr3R 30499687 intron PH4alphaNE1 - chr3R 30499737 intron PH4alphaNE1 - chr3R 30499787 intron PH4alphaNE1 - chr3R_8_30495001 chr3R_30495001 KN35_1-HE 2898 chr3R 30571698 30571722 chr3R 30571779 30571803 12 81 3.0 2.0 2.5 3.4 105 chr3R 30571698 intron tmod + chr3R 30571750 intron tmod + chr3R 30571803 intron tmod + chr3R_12_30570001 chr3R_30570001 KN35_1-HE 2899 chr3R 30581178 30581211 chr3R 30581603 30581636 10 425 4.5 4.0 4.2 1.9 458 chr3R 30581178 exon CG9702 + chr3R 30581407 exon CG9702 + chr3R 30581636 exon CG9702 + chr3R_10_30580001 chr3R_30580001 KN35_1-HE 2900 chr3R 30583909 30583935 chr3R 30583986 30584012 8 77 1.0 2.5 1.8 2.9 103 chr3R 30583909 intergenic CG9717 -,Rpt6R - chr3R 30583960 intergenic CG9717 -,Rpt6R - chr3R 30584012 intergenic CG9717 -,Rpt6R - chr3R_8_30580001 chr3R_30580001 KN35_1-HE 2901 chr3R 30624118 30624139 chr3R 30624201 30624222 13 83 2.5 3.5 3.0 3.2 104 chr3R 30624118 intergenic not near genes chr3R 30624170 intergenic not near genes chr3R 30624222 intergenic not near genes chr3R_13_30620001 chr3R_30620001 KN35_1-HE 2902 chr3R 30627601 30627638 chr3R 30627682 30627719 18 81 6.0 4.0 5.0 3.0 118 chr3R 30627601 3` UTR CG2267 - chr3R 30627660 exon CG2267 - chr3R 30627719 exon CG2267 - chr3R_18_30625001 chr3R_30625001 KN35_1-HE 2903 chr3R 30679516 30679552 chr3R 30686986 30687022 blood 18 7470 5.0 4.5 4.8 3.1 7506 chr3R 30679516 intergenic not near genes chr3R 30683269 intergenic not near genes chr3R 30687022 intergenic not near genes chr3R_18_30680001 chr3R_30680001 KN35_1-HE 2904 chr3R 30752451 30752484 chr3R 30752536 30752569 16 85 3.0 5.0 4.0 3.2 118 chr3R 30752451 intergenic not near genes chr3R 30752510 intergenic not near genes chr3R 30752569 intergenic not near genes chr3R_16_30750001 chr3R_30750001 KN35_1-HE 2905 chr3R 30818807 30818846 chr3R 30820373 30820412 1360 25 1566 3.5 6.0 4.8 4.3 1605 chr3R 30818807 intron cindr + chr3R 30819610 intron cindr + chr3R 30820412 intron cindr + chr3R_25_30815001 chr3R_30815001 KN35_1-HE 2906 chr3R 30898244 30898260 chr3R 30898331 30898347 12 87 3.5 9.0 6.2 1.7 103 chr3R 30898244 intron Cyp4c3 + chr3R 30898296 intron Cyp4c3 + chr3R 30898347 intron Cyp4c3 + chr3R_12_30895001 chr3R_30895001 KN35_1-HE 2907 chr3R 30946374 30946415 chr3R 30946471 30946500 7 88 0.0 1.5 0.8 3.9 126 chr3R 30946374 intergenic not near genes chr3R 30946437 intergenic not near genes chr3R 30946500 intergenic not near genes chr3R_7_30945001 chr3R_30945001 KN35_1-HE 2908 chr3R 31029181 31029205 chr3R 31030198 31030222 15 1017 6.0 5.5 5.8 2.2 1041 chr3R 31029181 intergenic not near genes chr3R 31029702 intergenic not near genes chr3R 31030222 intergenic not near genes chr3R_15_31025001 chr3R_31025001 KN35_1-HE 2909 chr3R 31074230 31074251 chr3R 31081829 31081850 springer 10 7599 5.0 0.0 2.5 2.9 7620 chr3R 31074230 intron Sox100B + chr3R 31078040 intron Sox100B + chr3R 31081850 intron Sox100B + chr3R_10_31075001 chr3R_31075001 KN35_1-HE 2910 chr3R 31084905 31084935 chr3R 31084982 31085012 10 77 1.0 2.5 1.8 3.6 107 chr3R 31084905 intergenic not near genes chr3R 31084958 intergenic not near genes chr3R 31085012 intergenic not near genes chr3R_10_31080001 chr3R_31080001 KN35_1-HE 2911 chr3R 31144745 31144771 chr3R 31144836 31144862 11 91 4.5 6.5 5.5 1.7 117 chr3R 31144745 intron Gycbeta100B + chr3R 31144804 intron Gycbeta100B + chr3R 31144862 intron Gycbeta100B + chr3R_11_31140001 chr3R_31140001 KN35_1-HE 2912 chr3R 31146825 31146855 chr3R 31147180 31147210 15 355 4.0 4.5 4.2 2.9 385 chr3R 31146825 intron Gycbeta100B + chr3R 31147018 intron Gycbeta100B + chr3R 31147210 intron Gycbeta100B + chr3R_15_31145001 chr3R_31145001 KN35_1-HE 2913 chr3R 31260236 31260266 chr3R 31260326 31260356 16 90 4.5 2.5 3.5 3.6 120 chr3R 31260236 intergenic CG18672 +,CG3669 + chr3R 31260296 5` UTR CG18672 + chr3R 31260356 5` UTR CG18672 + chr3R_16_31260001 chr3R_31260001 KN35_1-HE 2914 chr3R 31270897 31270930 chr3R 31270980 31271013 7 83 4.0 0.0 2.0 2.3 116 chr3R 31270897 intergenic not near genes chr3R 31270955 intergenic not near genes chr3R 31271013 intergenic not near genes chr3R_7_31270001 chr3R_31270001 KN35_1-HE 2915 chr3R 31338218 31338244 chr3R 31338303 31338329 9 85 4.0 0.0 2.0 3.0 111 chr3R 31338218 intron CG34347 + chr3R 31338274 intron CG34347 + chr3R 31338329 intron CG34347 + chr3R_9_31335001 chr3R_31335001 KN35_1-HE 2916 chr3R 31359601 31359606 chr3R 31359711 31359716 4 110 6.0 0.0 3.0 1.0 115 chr3R 31359601 intron CG34347 + chr3R 31359658 intron CG34347 + chr3R 31359716 intron CG34347 + chr3R_4_31355001 chr3R_31355001 KN35_1-HE 2917 chr3R 31412315 31412348 chr3R 31412410 31412443 8 95 0.5 1.5 1.0 4.0 128 chr3R 31412315 intron Gprk2 + chr3R 31412379 intron Gprk2 + chr3R 31412443 intron Gprk2 + chr3R_8_31410001 chr3R_31410001 KN35_1-HE 2918 chr3R 31413089 31413123 chr3R 31418290 31418324 copia 9 5201 2.5 0.5 1.5 3.6 5235 chr3R 31413089 intron Gprk2 + chr3R 31415706 intron Gprk2 + chr3R 31418324 intron Gprk2 + chr3R_9_31415001 chr3R_31415001 KN35_1-HE 2919 chr3R 31435361 31435389 chr3R 31435514 31435542 7 153 7.0 3.0 5.0 1.2 181 chr3R 31435361 intron Gprk2 + chr3R 31435452 intron Gprk2 + chr3R 31435542 intron Gprk2 + chr3R_7_31435001 chr3R_31435001 KN35_1-HE 2920 chr3R 31530816 31530847 chr3R 31531144 31531175 8 324 3.0 5.0 4.0 1.6 359 chr3R 31530816 intergenic not near genes chr3R 31530996 intergenic not near genes chr3R 31531175 intergenic not near genes chr3R_8_31530001 chr3R_31530001 KN35_1-HE 2921 chr3R 31538484 31538522 chr3R 31538563 31538601 16 79 1.0 4.0 2.5 4.6 117 chr3R 31538484 intergenic not near genes chr3R 31538542 intergenic not near genes chr3R 31538601 intergenic not near genes chr3R_16_31535001 chr3R_31535001 KN35_1-HE 2922 chr3R 31609962 31609968 chr3R 31610070 31610076 4 108 13.0 18.0 15.5 0.2 114 chr3R 31609962 intron CycG - chr3R 31610019 intron CycG - chr3R 31610076 intron CycG - chr3R_4_31610001 chr3R_31610001 KN35_1-HE 2923 chr3R 31650683 31650701 chr3R 31650764 31650768 9 79 5.5 4.0 4.8 1.6 85 chr3R 31650683 intron kek6 + chr3R 31650726 intron kek6 + chr3R 31650768 intron kek6 + chr3R_9_31650001 chr3R_31650001 KN35_1-HE 2924 chr3R 31691530 31691561 chr3R 31696297 31696328 Doc 16 4767 4.5 7.0 5.8 2.4 4798 chr3R 31691530 intergenic not near genes chr3R 31693929 intergenic not near genes chr3R 31696328 intergenic not near genes chr3R_16_31690001 chr3R_31690001 KN35_1-HE 2925 chr3R 31816450 31816464 chr3R 31816540 31816554 10 90 1.5 5.5 3.5 2.2 104 chr3R 31816450 intron RhoGAP100F + chr3R 31816502 intron RhoGAP100F + chr3R 31816554 intron RhoGAP100F + chr3R_10_31815001 chr3R_31815001 KN35_1-HE 2926 chr3R 31829969 31830006 chr3R 31830245 31830282 14 276 4.5 3.5 4.0 2.8 313 chr3R 31829969 intron RhoGAP100F + chr3R 31830126 intron RhoGAP100F + chr3R 31830282 intron RhoGAP100F + chr3R_14_31830001 chr3R_31830001 KN35_1-HE 2927 chr3R 31858760 31858781 chr3R 31858832 31858868 8 85 5.5 5.5 5.5 1.2 108 chr3R 31858760 intron heph - chr3R 31858814 intron heph - chr3R 31858868 intron heph - chr3R_8_31855001 chr3R_31855001 KN35_1-HE 2928 chr3R 31904115 31904140 chr3R 31904183 31904217 5 75 4.0 3.5 3.8 1.0 102 chr3R 31904115 intron heph - chr3R 31904166 intron heph - chr3R 31904217 intron heph - chr3R_5_31900001 chr3R_31900001 KN35_1-HE 2929 chr3R 31933276 31933304 chr3R 31933354 31933382 16 78 3.0 7.5 5.2 2.6 106 chr3R 31933276 intron heph - chr3R 31933329 intron heph - chr3R 31933382 intron heph - chr3R_16_31930001 chr3R_31930001 KN35_1-HE 2930 chr3R 31972479 31972483 chr3R 31972564 31972568 4 85 0.0 0.5 0.2 3.3 89 chr3R 31972479 intron heph - chr3R 31972524 intron heph - chr3R 31972568 intron heph - chr3R_4_31970001 chr3R_31970001 KN35_1-HE 2931 chr3R 31997991 31998025 chr3R 32005462 32005496 blood 13 7471 5.0 6.5 5.8 1.9 7505 chr3R 31997991 intron heph - chr3R 32001744 intron heph - chr3R 32005496 intron heph - chr3R_13_32000001 chr3R_32000001 KN35_1-HE 2932 chr3R 32030261 32030282 chr3R 32030347 32030368 8 86 4.0 6.5 5.2 1.3 107 chr3R 32030261 intergenic not near genes chr3R 32030314 intergenic not near genes chr3R 32030368 intergenic not near genes chr3R_8_32030001 chr3R_32030001 KN35_1-HE 2933 chr4 76491 76516 chr4 81935 81960 I-element 13 5444 9.0 5.0 7.0 1.6 5469 chr4 76491 intron pan + chr4 79226 intron pan + chr4 81960 intron pan + chr4_13_75001 chr4_75001 KN35_1-HE 2934 chr4 97203 97228 chr4 97284 97310 5 81 1.0 3.5 2.2 1.6 107 chr4 97203 intron pan + chr4 97256 intron pan + chr4 97310 intron pan + chr4_5_95001 chr4_95001 KN35_1-HE 2935 chr4 189661 189673 chr4 192488 192500 INE-1 5 2827 19.0 29.5 24.2 0.2 2839 chr4 189661 intron CG2316 - chr4 191080 intron CG2316 - chr4 192500 intron CG2316 - chr4_5_190001 chr4_190001 KN35_1-HE 2936 chr4 194710 194716 chr4 195852 195858 4 1142 4.0 5.0 4.5 0.7 1148 chr4 194710 intergenic CR44441 + chr4 195284 5` UTR CR44441 + chr4 195858 intergenic CR44441 + chr4_4_195001 chr4_195001 KN35_1-HE 2937 chr4 257403 257436 chr4 257574 257607 15 171 4.0 2.0 3.0 3.8 204 chr4 257403 exon RhoGAP102A + chr4 257505 intron RhoGAP102A + chr4 257607 intron RhoGAP102A + chr4_15_255001 chr4_255001 KN35_1-HE 2938 chr4 279099 279131 chr4 279178 279210 13 79 5.0 2.5 3.8 2.7 111 chr4 279099 3` UTR Syt7 - chr4 279154 3` UTR Syt7 - chr4 279210 3` UTR Syt7 - chr4_13_275001 chr4_275001 KN35_1-HE 2939 chr4 280802 280836 chr4 281433 281467 8 631 4.0 6.0 5.0 1.3 665 chr4 280802 intron Syt7 - chr4 281134 intron Syt7 - chr4 281467 intron Syt7 - chr4_8_280001 chr4_280001 KN35_1-HE 2940 chr4 319989 320022 chr4 328166 328199 Stalker2 11 8177 1.0 1.5 1.2 5.0 8210 chr4 319989 3` UTR CG32850 + chr4 324094 intron CG32850 + chr4 328199 3` UTR,3` UTR CG32850 +,PMCA - chr4_11_320001 chr4_320001 KN35_1-HE 2941 chr4 401384 401416 chr4 401473 401505 20 89 12.5 2.5 7.5 2.4 121 chr4 401384 intergenic not near genes chr4 401444 intergenic not near genes chr4 401505 intergenic not near genes chr4_20_400001 chr4_400001 KN35_1-HE 2942 chr4 419462 419466 chr4 419692 419696 5 230 24.0 29.0 26.5 0.2 234 chr4 419462 intergenic not near genes chr4 419579 intergenic not near genes chr4 419696 intergenic not near genes chr4_5_415001 chr4_415001 KN35_1-HE 2943 chr4 671606 671636 chr4 680190 680220 Tirant 26 8584 9.5 12.5 11.0 2.2 8614 chr4 671606 intron CG11360 + chr4 675913 intron CG11360 + chr4 680220 intron CG11360 + chr4_26_675001 chr4_675001 KN35_1-HE 2944 chr4 896784 896814 chr4 896862 896892 6 78 5.0 3.0 4.0 1.2 108 chr4 896784 intron unc-13 - chr4 896838 intron unc-13 - chr4 896892 intron unc-13 - chr4_6_895001 chr4_895001 KN35_1-HE 2945 chr4 905564 905596 chr4 905647 905679 27 83 3.5 4.0 3.8 5.6 115 chr4 905564 5` UTR unc-13 - chr4 905622 5` UTR unc-13 - chr4 905679 5` UTR unc-13 - chr4_27_905001 chr4_905001 KN35_1-HE 2946 chr4 1134162 1134191 chr4 1135073 1135102 8 911 4.5 4.5 4.5 1.5 940 chr4 1134162 intron CG11155 + chr4 1134632 intron CG11155 + chr4 1135102 exon CG11155 + chr4_8_1130001 chr4_1130001 KN35_1-HE 2947 chr4 1163773 1163778 chr4 1164864 1164869 5 1091 21.0 9.0 15.0 0.3 1096 chr4 1163773 intron Kif3C + chr4 1164321 intron Kif3C + chr4 1164869 intron Kif3C + chr4_5_1160001 chr4_1160001 KN35_1-HE 2948 chr4 1250559 1250578 chr4 1250646 1250665 6 87 1.5 2.0 1.8 2.1 106 chr4 1250559 intron Caps + chr4 1250612 intron Caps + chr4 1250665 intron Caps + chr4_6_1250001 chr4_1250001 KN35_1-HE 2949 chrX 157363 157387 chrX 157500 157524 8 137 3.5 5.0 4.2 1.5 161 chrX 157363 intron tyn + chrX 157444 intron tyn + chrX 157524 intron tyn + chrX_8_155001 chrX_155001 KN35_1-HE 2950 chrX 186994 187004 chrX 187128 187143 7 138 7.0 7.0 7.0 0.9 149 chrX 186994 intron tyn + chrX 187068 intron tyn + chrX 187143 intron tyn + chrX_7_185001 chrX_185001 KN35_1-HE 2951 chrX 295862 295882 chrX 303483 303503 412 13 7621 6.5 8.5 7.5 1.5 7641 chrX 295862 intron CG3777 + chrX 299682 intron CG3777 + chrX 303503 intron CG3777 + chrX_13_295001 chrX_295001 KN35_1-HE 2952 chrX 318469 318501 chrX 323556 323588 flea 18 5087 9.5 13.0 11.2 1.5 5119 chrX 318469 intron,intron CG3777 +,CG32816 - chrX 321028 intron,intron CG3777 +,CG32816 - chrX 323588 intron,intron CG3777 +,CG32816 - chrX_18_320001 chrX_320001 KN35_1-HE 2953 chrX 389828 389862 chrX 390149 390183 22 321 7.0 3.5 5.2 3.5 355 chrX 389828 intron CG32816 - chrX 390006 intron CG32816 - chrX 390183 intron CG32816 - chrX_22_390001 chrX_390001 KN35_1-HE 2954 chrX 400137 400168 chrX 400219 400250 14 82 5.0 5.0 5.0 2.3 113 chrX 400137 intron CG32816 - chrX 400194 intron CG32816 - chrX 400250 intron CG32816 - chrX_14_400001 chrX_400001 KN35_1-HE 2955 chrX 428417 428451 chrX 434618 434652 3S18 18 6201 4.5 3.5 4.0 3.6 6235 chrX 428417 intron CG32816 - chrX 431534 intron CG32816 - chrX 434652 intron CG32816 - chrX_18_430001 chrX_430001 KN35_1-HE 2956 chrX 450366 450387 chrX 450445 450466 11 79 8.5 3.0 5.8 1.6 100 chrX 450366 intron CG32816 - chrX 450416 intron CG32816 - chrX 450466 intron CG32816 - chrX_11_450001 chrX_450001 KN35_1-HE 2957 chrX 551423 551454 chrX 558983 559015 412 25 7561 8.5 7.0 7.8 2.8 7592 chrX 551423 intron Appl + chrX 555219 intron Appl + chrX 559015 intron Appl + chrX_25_555001 chrX_555001 KN35_1-HE 2958 chrX 664927 664939 chrX 665167 665179 6 240 2.0 3.0 2.5 1.7 252 chrX 664927 intergenic not near genes chrX 665053 intergenic not near genes chrX 665179 intergenic not near genes chrX_6_665001 chrX_665001 KN35_1-HE 2959 chrX 680838 680866 chrX 680922 680950 14 84 4.0 3.5 3.8 2.9 112 chrX 680838 intergenic not near genes chrX 680894 intergenic not near genes chrX 680950 intergenic not near genes chrX_14_680001 chrX_680001 KN35_1-HE 2960 chrX 778125 778160 chrX 778216 778251 16 91 5.5 0.5 3.0 4.0 126 chrX 778125 intron fz3 + chrX 778188 intron fz3 + chrX 778251 intron fz3 + chrX_16_775001 chrX_775001 KN35_1-HE 2961 chrX 812276 812291 chrX 817910 817925 297 6 5634 9.5 4.0 6.8 0.8 5649 chrX 812276 intron CG43867 - chrX 815100 intron CG43867 - chrX 817925 intron CG43867 - chrX_6_815001 chrX_815001 KN35_1-HE 2962 chrX 827598 827623 chrX 835391 835416 roo 14 7793 6.5 4.5 5.5 2.2 7818 chrX 827598 intron CG43867 - chrX 831507 intron CG43867 - chrX 835416 intron CG43867 - chrX_14_830001 chrX_830001 KN35_1-HE 2963 chrX 867679 867707 chrX 867773 867801 8 94 3.5 6.0 4.8 1.4 122 chrX 867679 intron CG43867 - chrX 867740 intron CG43867 - chrX 867801 intron CG43867 - chrX_8_865001 chrX_865001 KN35_1-HE 2964 chrX 868495 868518 chrX 868573 868596 14 78 1.0 8.0 4.5 2.5 101 chrX 868495 intron CG43867 - chrX 868546 intron CG43867 - chrX 868596 intron CG43867 - chrX_14_865001 chrX_865001 KN35_1-HE 2965 chrX 886590 886622 chrX 886679 886711 15 89 2.0 5.0 3.5 3.3 121 chrX 886590 intron CG43867 - chrX 886650 intron CG43867 - chrX 886711 intron CG43867 - chrX_15_885001 chrX_885001 KN35_1-HE 2966 chrX 906712 906734 chrX 908502 908524 S-element 12 1790 3.0 12.5 7.8 1.4 1812 chrX 906712 intron CG43867 - chrX 907618 intron CG43867 - chrX 908524 intron CG43867 - chrX_12_905001 chrX_905001 KN35_1-HE 2967 chrX 959950 959962 chrX 960042 960060 7 97 2.5 4.0 3.2 1.7 110 chrX 959950 intergenic not near genes chrX 960005 intergenic not near genes chrX 960060 intergenic not near genes chrX_7_960001 chrX_960001 KN35_1-HE 2968 chrX 990222 990247 chrX 990303 990325 11 75 1.5 3.0 2.2 3.4 103 chrX 990222 intergenic CG18823 + chrX 990274 intergenic CG18823 + chrX 990325 intergenic CG18823 + chrX_11_990001 chrX_990001 KN35_1-HE 2969 chrX 1051073 1051091 chrX 1051152 1051170 9 79 4.5 6.5 5.5 1.4 97 chrX 1051073 intron CR44779 + chrX 1051122 intron CR44779 + chrX 1051170 intron CR44779 + chrX_9_1050001 chrX_1050001 KN35_1-HE 2970 chrX 1095155 1095177 chrX 1095245 1095267 19 90 5.0 9.5 7.2 2.3 112 chrX 1095155 intron CG3655 - chrX 1095211 intron CG3655 - chrX 1095267 intron CG3655 - chrX_19_1095001 chrX_1095001 KN35_1-HE 2971 chrX 1236935 1236943 chrX 1237040 1237048 10 105 10.0 8.5 9.2 1.0 113 chrX 1236935 3` UTR CG11403 - chrX 1236992 3` UTR CG11403 - chrX 1237048 3` UTR CG11403 - chrX_10_1235001 chrX_1235001 KN35_1-HE 2972 chrX 1263615 1263646 chrX 1263728 1263759 18 113 4.0 2.5 3.2 4.3 144 chrX 1263615 intron Atf3 - chrX 1263687 intron Atf3 - chrX 1263759 intron Atf3 - chrX_18_1260001 chrX_1260001 KN35_1-HE 2973 chrX 1357778 1357807 chrX 1367949 1367978 Doc 12 10171 5.0 8.5 6.8 1.5 10200 chrX 1357778 intergenic png - chrX 1362878 intergenic not near genes chrX 1367978 intergenic not near genes chrX_12_1360001 chrX_1360001 KN35_1-HE 2974 chrX 1497323 1497353 chrX 1497404 1497433 15 80 4.5 7.0 5.8 2.2 110 chrX 1497323 intron,intron inc +,Nmdar2 - chrX 1497378 intron,intron inc +,Nmdar2 - chrX 1497433 intron,intron inc +,Nmdar2 - chrX_15_1495001 chrX_1495001 KN35_1-HE 2975 chrX 1627971 1627996 chrX 1635440 1635465 gtwin 15 7468 15.0 9.0 12.0 1.2 7494 chrX 1627971 intron,intron Mur2B -,br + chrX 1631718 intron,intron Mur2B -,br + chrX 1635465 intron,intron Mur2B -,br + chrX_15_1630001 chrX_1630001 KN35_1-HE 2976 chrX 1701110 1701138 chrX 1701187 1701217 8 79 2.5 4.0 3.2 1.9 107 chrX 1701110 intergenic not near genes chrX 1701164 intergenic not near genes chrX 1701217 intergenic not near genes chrX_8_1700001 chrX_1700001 KN35_1-HE 2977 chrX 1712259 1712270 chrX 1712338 1712349 4 76 5.5 10.5 8.0 0.4 90 chrX 1712259 intergenic not near genes chrX 1712304 intergenic not near genes chrX 1712349 intergenic not near genes chrX_4_1710001 chrX_1710001 KN35_1-HE 2978 chrX 1818483 1818493 chrX 1818603 1818613 6 120 10.0 0.0 5.0 1.0 130 chrX 1818483 intron CG42666 + chrX 1818548 intron CG42666 + chrX 1818613 intron CG42666 + chrX_6_1815001 chrX_1815001 KN35_1-HE 2979 chrX 1819213 1819224 chrX 1821279 1821290 4 2066 55.0 40.5 47.8 0.1 2077 chrX 1819213 intron CG42666 + chrX 1820252 intron,intron CG42666 +,CG14810 - chrX 1821290 intron CG42666 + chrX_4_1820001 chrX_1820001 KN35_1-HE 2980 chrX 1930542 1930561 chrX 1938114 1938133 opus 7 7572 3.5 3.5 3.5 1.6 7591 chrX 1930542 intergenic CG11596 + chrX 1934338 intergenic not near genes chrX 1938133 3` UTR CG3857 - chrX_7_1930001 chrX_1930001 KN35_1-HE 2981 chrX 1954885 1954910 chrX 1962826 1962851 Stalker2 8 7940 3.0 1.0 2.0 2.7 7966 chrX 1954885 intron Hr4 + chrX 1958868 intron Hr4 + chrX 1962851 intron Hr4 + chrX_8_1955001 chrX_1955001 KN35_1-HE 2982 chrX 2076049 2076083 chrX 2076132 2076167 11 83 0.0 4.5 2.2 3.4 118 chrX 2076049 intergenic CG4045 - chrX 2076108 intergenic CG4045 - chrX 2076167 intergenic CG4045 - chrX_11_2075001 chrX_2075001 KN35_1-HE 2983 chrX 2189405 2189432 chrX 2189482 2189509 9 77 3.5 2.5 3.0 2.2 104 chrX 2189405 5` UTR Mct1 + chrX 2189457 intron Mct1 + chrX 2189509 intron Mct1 + chrX_9_2185001 chrX_2185001 KN35_1-HE 2984 chrX 2399835 2399860 chrX 2408189 2408208 roo 14 8353 7.0 0.0 3.5 3.1 8373 chrX 2399835 intergenic not near genes chrX 2404022 intergenic not near genes chrX 2408208 intergenic not near genes chrX_14_2400001 chrX_2400001 KN35_1-HE 2985 chrX 2493258 2493282 chrX 2493338 2493362 8 80 0.0 7.5 3.8 1.7 104 chrX 2493258 intron trol - chrX 2493310 intron trol - chrX 2493362 intron trol - chrX_8_2490001 chrX_2490001 KN35_1-HE 2986 chrX 2513436 2513454 chrX 2513501 2513532 7 76 3.0 3.5 3.2 1.7 96 chrX 2513436 intron trol - chrX 2513484 intron trol - chrX 2513532 intron trol - chrX_7_2510001 chrX_2510001 KN35_1-HE 2987 chrX 2578808 2578843 chrX 2578901 2578936 15 93 1.5 2.5 2.0 5.0 128 chrX 2578808 intergenic Pdfr +,Vha36-3 - chrX 2578872 intergenic Vha36-3 -,Pdfr + chrX 2578936 intergenic Vha36-3 -,Pdfr + chrX_15_2575001 chrX_2575001 KN35_1-HE 2988 chrX 2635372 2635400 chrX 2635482 2635510 7 110 3.0 4.0 3.5 1.6 138 chrX 2635372 intron sgg + chrX 2635441 intron sgg + chrX 2635510 intron sgg + chrX_7_2635001 chrX_2635001 KN35_1-HE 2989 chrX 2644340 2644372 chrX 2644424 2644454 18 84 6.0 3.5 4.8 3.1 114 chrX 2644340 intron sgg + chrX 2644397 intron sgg + chrX 2644454 intron sgg + chrX_18_2640001 chrX_2640001 KN35_1-HE 2990 chrX 2664226 2664265 chrX 2664304 2664343 31 78 10.5 7.5 9.0 3.1 117 chrX 2664226 intron sgg + chrX 2664284 intron sgg + chrX 2664343 intron sgg + chrX_31_2660001 chrX_2660001 KN35_1-HE 2991 chrX 2664372 2664404 chrX 2665528 2665561 1360 23 1156 6.5 0.0 3.2 5.5 1189 chrX 2664372 intron sgg + chrX 2664966 intron sgg + chrX 2665561 intron sgg + chrX_23_2660001 chrX_2660001 KN35_1-HE 2992 chrX 2675684 2675704 chrX 2675771 2675791 11 87 10.5 5.0 7.8 1.2 107 chrX 2675684 intron,5` UTR sgg +,CR45197 + chrX 2675738 intron,5` UTR sgg +,CR45197 + chrX 2675791 intron,5` UTR sgg +,CR45197 + chrX_11_2675001 chrX_2675001 KN35_1-HE 2993 chrX 2733947 2733978 chrX 2734883 2734914 11 941 15.0 32.0 23.5 0.4 967 chrX 2733947 exon CG2712 + chrX 2734430 3` UTR crm - chrX 2734914 3` UTR crm - chrX_11_2730001 chrX_2730001 KN35_1-HE 2994 chrX 2798181 2798205 chrX 2798261 2798285 11 80 3.0 4.0 3.5 2.4 104 chrX 2798181 intron kirre + chrX 2798233 intron kirre + chrX 2798285 intron kirre + chrX_11_2795001 chrX_2795001 KN35_1-HE 2995 chrX 2844896 2844932 chrX 2852307 2852343 mdg1 18 7411 5.0 6.5 5.8 2.6 7447 chrX 2844896 intron kirre + chrX 2848620 intron kirre + chrX 2852343 intron kirre + chrX_18_2845001 chrX_2845001 KN35_1-HE 2996 chrX 2917094 2917121 chrX 2917174 2917202 16 81 3.0 0.5 1.8 5.7 108 chrX 2917094 intron kirre + chrX 2917148 intron kirre + chrX 2917202 intron kirre + chrX_16_2915001 chrX_2915001 KN35_1-HE 2997 chrX 2938407 2938428 chrX 2938515 2938536 16 108 6.5 3.5 5.0 2.7 129 chrX 2938407 intron kirre + chrX 2938472 intron kirre + chrX 2938536 intron kirre + chrX_16_2935001 chrX_2935001 KN35_1-HE 2998 chrX 2941033 2941057 chrX 2941113 2941139 12 82 7.0 8.5 7.8 1.4 106 chrX 2941033 intron kirre + chrX 2941086 intron kirre + chrX 2941139 intron kirre + chrX_12_2940001 chrX_2940001 KN35_1-HE 2999 chrX 2942951 2942985 chrX 2943032 2943066 17 81 2.5 3.5 3.0 4.2 115 chrX 2942951 intron kirre + chrX 2943008 intron kirre + chrX 2943066 intron kirre + chrX_17_2940001 chrX_2940001 KN35_1-HE 3000 chrX 2978712 2978745 chrX 2978799 2978832 6 87 1.0 1.5 1.2 2.7 120 chrX 2978712 intron kirre + chrX 2978772 intron kirre + chrX 2978832 intron kirre + chrX_6_2975001 chrX_2975001 KN35_1-HE 3001 chrX 3026042 3026046 chrX 3026194 3026198 5 152 7.5 13.5 10.5 0.4 156 chrX 3026042 intron kirre + chrX 3026120 intron kirre + chrX 3026198 intron kirre + chrX_5_3025001 chrX_3025001 KN35_1-HE 3002 chrX 3058020 3058052 chrX 3058262 3058294 pogo 13 242 5.5 2.0 3.8 2.7 274 chrX 3058020 intron kirre + chrX 3058157 intron kirre + chrX 3058294 intron kirre + chrX_13_3055001 chrX_3055001 KN35_1-HE 3003 chrX 3075635 3075649 chrX 3080943 3080957 Transpac 6 5308 11.0 0.5 5.8 0.9 5322 chrX 3075635 intron kirre + chrX 3078296 intron kirre + chrX 3080957 intron kirre + chrX_6_3075001 chrX_3075001 KN35_1-HE 3004 chrX 3109449 3109476 chrX 3109527 3109554 14 78 2.5 3.5 3.0 3.5 105 chrX 3109449 intron kirre + chrX 3109502 intron kirre + chrX 3109554 intron kirre + chrX_14_3105001 chrX_3105001 KN35_1-HE 3005 chrX 3111073 3111084 chrX 3111154 3111165 4 81 3.5 0.0 1.8 1.4 92 chrX 3111073 intron kirre + chrX 3111119 intron kirre + chrX 3111165 intron kirre + chrX_4_3110001 chrX_3110001 KN35_1-HE 3006 chrX 3120077 3120097 chrX 3120156 3120176 10 79 0.0 5.0 2.5 2.9 99 chrX 3120077 intron kirre + chrX 3120126 intron kirre + chrX 3120176 intron kirre + chrX_10_3120001 chrX_3120001 KN35_1-HE 3007 chrX 3128874 3128882 chrX 3128958 3128966 5 84 3.0 12.0 7.5 0.6 92 chrX 3128874 intron kirre + chrX 3128920 intron kirre + chrX 3128966 intron kirre + chrX_5_3125001 chrX_3125001 KN35_1-HE 3008 chrX 3206489 3206504 chrX 3206569 3206584 5 80 0.0 7.5 3.8 1.0 95 chrX 3206489 intron dnc + chrX 3206536 intron dnc + chrX 3206584 intron dnc + chrX_5_3205001 chrX_3205001 KN35_1-HE 3009 chrX 3311540 3311552 chrX 3311617 3311629 6 76 2.5 6.5 4.5 1.1 89 chrX 3311540 intron dnc + chrX 3311584 intron dnc + chrX 3311629 intron dnc + chrX_6_3310001 chrX_3310001 KN35_1-HE 3010 chrX 3364828 3364859 chrX 3364911 3364942 10 83 3.0 2.5 2.8 2.6 114 chrX 3364828 intergenic not near genes chrX 3364885 intergenic not near genes chrX 3364942 intergenic not near genes chrX_10_3360001 chrX_3360001 KN35_1-HE 3011 chrX 3398143 3398377 chrX 3398225 3398456 6 82 2.5 3.5 3.0 1.5 313 chrX 3398143 intron,intron CR44999 +,CG12535 - chrX 3398300 intron,intron CR44999 +,CG12535 - chrX 3398456 intron,intron CR44999 +,CG12535 - chrX_6_3395001 chrX_3395001 KN35_1-HE 3012 chrX 3415014 3415048 chrX 3421200 3421233 3S18 12 6186 1.0 3.0 2.0 4.0 6219 chrX 3415014 intron,intron CR44999 +,CG12535 - chrX 3418124 intron,intron CR44999 +,CG12535 - chrX 3421233 intron,intron CR44999 +,CG12535 - chrX_12_3415001 chrX_3415001 KN35_1-HE 3013 chrX 3493092 3493125 chrX 3502253 3502286 roo 12 9161 6.0 2.0 4.0 2.4 9194 chrX 3493092 intron,intron CR44999 +,Gas8 - chrX 3497689 intron,intron CR44999 +,Gas8 - chrX 3502286 intron,intron CR44999 +,Gas8 - chrX_12_3495001 chrX_3495001 KN35_1-HE 3014 chrX 3567286 3567309 chrX 3567372 3567395 20 86 0.0 6.5 3.2 4.8 109 chrX 3567286 intron,intron CG32791 -,ppk8 + chrX 3567340 intron,intron CG32791 -,ppk8 + chrX 3567395 intron,intron CG32791 -,ppk8 + chrX_20_3565001 chrX_3565001 KN35_1-HE 3015 chrX 3597547 3597580 chrX 3619716 3619749 roo 18 22169 6.5 4.0 5.2 2.9 22202 chrX 3597547 intron AstA-R1 + chrX 3608648 intron AstA-R1 + chrX 3619749 intron AstA-R1 + chrX_18_3605001 chrX_3605001 KN35_1-HE 3016 chrX 3660711 3660724 chrX 3660793 3660806 4 82 1.5 0.0 0.8 2.2 95 chrX 3660711 intron AstA-R1 + chrX 3660758 intron AstA-R1 + chrX 3660806 intron AstA-R1 + chrX_4_3660001 chrX_3660001 KN35_1-HE 3017 chrX 3726762 3726795 chrX 3730160 3730193 NOF 16 3398 4.5 0.5 2.5 4.6 3431 chrX 3726762 intron tlk + chrX 3728478 intron tlk + chrX 3730193 intron tlk + chrX_16_3725001 chrX_3725001 KN35_1-HE 3018 chrX 3768275 3768285 chrX 3768353 3768363 5 78 5.5 7.0 6.2 0.7 88 chrX 3768275 intron tlk + chrX 3768319 intron tlk + chrX 3768363 intron tlk + chrX_5_3765001 chrX_3765001 KN35_1-HE 3019 chrX 3771766 3771781 chrX 3771860 3771875 8 94 5.0 5.0 5.0 1.3 109 chrX 3771766 intron tlk + chrX 3771820 intron tlk + chrX 3771875 intron tlk + chrX_8_3770001 chrX_3770001 KN35_1-HE 3020 chrX 3774280 3774310 chrX 3774362 3774392 9 82 6.0 6.0 6.0 1.3 112 chrX 3774280 intron tlk + chrX 3774336 intron tlk + chrX 3774392 intron tlk + chrX_9_3770001 chrX_3770001 KN35_1-HE 3021 chrX 3841583 3841600 chrX 3841664 3841681 13 81 2.5 0.0 1.2 5.9 98 chrX 3841583 intron ec + chrX 3841632 intron ec + chrX 3841681 intron ec + chrX_13_3840001 chrX_3840001 KN35_1-HE 3022 chrX 3880461 3880489 chrX 3880548 3880576 12 87 0.0 7.0 3.5 2.7 115 chrX 3880461 intergenic VhaAC39-1 + chrX 3880518 intergenic VhaAC39-1 + chrX 3880576 intergenic VhaAC39-1 + chrX_12_3880001 chrX_3880001 KN35_1-HE 3023 chrX 3912337 3912363 chrX 3912425 3912451 10 88 1.0 4.0 2.5 2.9 114 chrX 3912337 intron CG42541 - chrX 3912394 intron CG42541 - chrX 3912451 intron CG42541 - chrX_10_3910001 chrX_3910001 KN35_1-HE 3024 chrX 3980886 3980888 chrX 3980958 3980966 4 76 14.5 18.0 16.2 0.2 80 chrX 3980886 intergenic not near genes chrX 3980926 intergenic not near genes chrX 3980966 intergenic not near genes chrX_4_3980001 chrX_3980001 KN35_1-HE 3025 chrX 3986881 3986893 chrX 3994515 3994527 412 8 7634 5.0 0.0 2.5 2.3 7646 chrX 3986881 intergenic not near genes chrX 3990704 intergenic not near genes chrX 3994527 intergenic not near genes chrX_8_3990001 chrX_3990001 KN35_1-HE 3026 chrX 4055395 4055423 chrX 4055507 4055535 15 112 6.0 4.5 5.2 2.4 140 chrX 4055395 intergenic not near genes chrX 4055465 intergenic not near genes chrX 4055535 intergenic not near genes chrX_15_4055001 chrX_4055001 KN35_1-HE 3027 chrX 4157895 4157922 chrX 4164931 4164958 297 15 7036 12.0 12.0 12.0 1.2 7063 chrX 4157895 intron Fas2 - chrX 4161426 intron Fas2 - chrX 4164958 intron Fas2 - chrX_15_4160001 chrX_4160001 KN35_1-HE 3028 chrX 4226096 4226126 chrX 4226197 4226227 8 100 5.5 5.5 5.5 1.2 131 chrX 4226096 intergenic not near genes chrX 4226162 intergenic not near genes chrX 4226227 intergenic not near genes chrX_8_4225001 chrX_4225001 KN35_1-HE 3029 chrX 4252946 4252979 chrX 4253035 4253068 13 89 4.5 4.5 4.5 2.4 122 chrX 4252946 intergenic CG15576 - chrX 4253007 intergenic CG15576 - chrX 4253068 intergenic CG15576 - chrX_13_4250001 chrX_4250001 KN35_1-HE 3030 chrX 4259900 4259933 chrX 4259984 4260017 26 84 2.0 10.0 6.0 3.7 117 chrX 4259900 intergenic not near genes chrX 4259958 intergenic not near genes chrX 4260017 intergenic not near genes chrX_26_4255001 chrX_4255001 KN35_1-HE 3031 chrX 4262752 4262788 chrX 4262852 4262888 25 100 2.5 4.5 3.5 5.6 136 chrX 4262752 intergenic not near genes chrX 4262820 intergenic not near genes chrX 4262888 intergenic not near genes chrX_25_4260001 chrX_4260001 KN35_1-HE 3032 chrX 4401058 4401086 chrX 4401138 4401166 20 80 0.0 1.0 0.5 13.3 108 chrX 4401058 intron CR32773 - chrX 4401112 intron CR32773 - chrX 4401166 intron CR32773 - chrX_20_4400001 chrX_4400001 KN35_1-HE 3033 chrX 4417778 4417792 chrX 4417855 4417869 10 77 0.5 0.0 0.2 8.3 91 chrX 4417778 intron,intron CR32773 -,bi + chrX 4417824 intron,intron CR32773 -,bi + chrX 4417869 intron,intron CR32773 -,bi + chrX_10_4415001 chrX_4415001 KN35_1-HE 3034 chrX 4436456 4436463 chrX 4436533 4436540 7 77 7.5 1.0 4.2 1.3 84 chrX 4436456 intron,intron CR32773 -,bi + chrX 4436498 intron,intron CR32773 -,bi + chrX 4436540 intron,intron CR32773 -,bi + chrX_7_4435001 chrX_4435001 KN35_1-HE 3035 chrX 4503650 4503664 chrX 4503730 4503744 6 80 8.0 0.0 4.0 1.2 94 chrX 4503650 intron CR32773 - chrX 4503697 intron CR32773 - chrX 4503744 intron CR32773 - chrX_6_4500001 chrX_4500001 KN35_1-HE 3036 chrX 4510774 4510808 chrX 4510972 4511006 14 198 1.0 3.5 2.2 4.4 232 chrX 4510774 intron CR32773 - chrX 4510890 intron CR32773 - chrX 4511006 intron CR32773 - chrX_14_4510001 chrX_4510001 KN35_1-HE 3037 chrX 4610980 4610997 chrX 4611072 4611089 6 92 1.0 5.5 3.2 1.4 109 chrX 4610980 3` UTR CR32773 - chrX 4611034 3` UTR CR32773 - chrX 4611089 3` UTR CR32773 - chrX_6_4610001 chrX_4610001 KN35_1-HE 3038 chrX 4660820 4660839 chrX 4660920 4660939 6 100 7.0 0.0 3.5 1.3 119 chrX 4660820 intron CG3009 - chrX 4660880 intron CG3009 - chrX 4660939 intron CG3009 - chrX_6_4660001 chrX_4660001 KN35_1-HE 3039 chrX 4670918 4670944 chrX 4671048 4671074 8 130 5.0 2.0 3.5 1.8 156 chrX 4670918 intron rap - chrX 4670996 intron rap - chrX 4671074 intron rap - chrX_8_4670001 chrX_4670001 KN35_1-HE 3040 chrX 4698060 4698085 chrX 4698154 4698179 18 94 5.5 8.5 7.0 2.2 119 chrX 4698060 intron ctp + chrX 4698120 intron ctp + chrX 4698179 intron ctp + chrX_18_4695001 chrX_4695001 KN35_1-HE 3041 chrX 4700389 4700425 chrX 4700733 4700769 jockey 12 344 6.5 4.5 5.5 1.8 380 chrX 4700389 3` UTR ctp + chrX 4700579 3` UTR ctp + chrX 4700769 3` UTR ctp + chrX_12_4700001 chrX_4700001 KN35_1-HE 3042 chrX 4723574 4723585 chrX 4723655 4723666 4 81 5.5 6.0 5.8 0.6 92 chrX 4723574 intron Proc-R + chrX 4723620 intron Proc-R + chrX 4723666 intron Proc-R + chrX_4_4720001 chrX_4720001 KN35_1-HE 3043 chrX 4731812 4731830 chrX 4736906 4736924 jockey 12 5094 9.5 0.5 5.0 2.0 5112 chrX 4731812 intergenic not near genes chrX 4734368 intergenic not near genes chrX 4736924 intergenic not near genes chrX_12_4730001 chrX_4730001 KN35_1-HE 3044 chrX 4744155 4744174 chrX 4744254 4744273 18 99 5.5 3.0 4.2 3.5 118 chrX 4744155 intergenic not near genes chrX 4744214 intergenic not near genes chrX 4744273 intergenic not near genes chrX_18_4740001 chrX_4740001 KN35_1-HE 3045 chrX 4744799 4744810 chrX 4744885 4744896 10 86 10.0 6.5 8.2 1.1 97 chrX 4744799 intergenic not near genes chrX 4744848 intergenic not near genes chrX 4744896 intergenic not near genes chrX_10_4740001 chrX_4740001 KN35_1-HE 3046 chrX 4755420 4755438 chrX 4755498 4755516 14 78 0.0 11.5 5.8 2.1 96 chrX 4755420 intergenic not near genes chrX 4755468 intergenic not near genes chrX 4755516 intergenic not near genes chrX_14_4755001 chrX_4755001 KN35_1-HE 3047 chrX 4763249 4763279 chrX 4763738 4763768 Stalker4 10 489 7.0 4.5 5.8 1.5 519 chrX 4763249 intergenic not near genes chrX 4763508 intergenic not near genes chrX 4763768 intergenic not near genes chrX_10_4760001 chrX_4760001 KN35_1-HE 3048 chrX 4792388 4792410 chrX 4792822 4792844 jockey 8 434 4.5 6.0 5.2 1.3 456 chrX 4792388 intergenic not near genes chrX 4792616 intergenic not near genes chrX 4792844 intergenic not near genes chrX_8_4790001 chrX_4790001 KN35_1-HE 3049 chrX 4827970 4827975 chrX 4835342 4835347 Stalker4 4 7372 16.5 4.0 10.2 0.4 7377 chrX 4827970 intergenic not near genes chrX 4831658 intergenic not near genes chrX 4835347 intergenic not near genes chrX_4_4830001 chrX_4830001 KN35_1-HE 3050 chrX 4827988 4828002 chrX 4835337 4835374 Stalker4 16 7369 7.0 3.5 5.2 2.6 7386 chrX 4827988 intergenic not near genes chrX 4831681 intergenic not near genes chrX 4835374 intergenic not near genes chrX_16_4830001 chrX_4830001 KN35_1-HE 3051 chrX 4847475 4847505 chrX 4847596 4847624 21 121 4.5 5.5 5.0 3.5 149 chrX 4847475 intron CG42594 + chrX 4847550 intron CG42594 + chrX 4847624 intron CG42594 + chrX_21_4845001 chrX_4845001 KN35_1-HE 3052 chrX 4965563 4965595 chrX 4965656 4965688 16 93 4.5 3.0 3.8 3.3 125 chrX 4965563 intron CR44833 - chrX 4965626 intron CR44833 - chrX 4965688 intron CR44833 - chrX_16_4965001 chrX_4965001 KN35_1-HE 3053 chrX 4986074 4986109 chrX 4986648 4986683 19 574 4.0 4.5 4.2 3.7 609 chrX 4986074 intron CR44833 - chrX 4986378 intron CR44833 - chrX 4986683 intron CR44833 - chrX_19_4985001 chrX_4985001 KN35_1-HE 3054 chrX 4990043 4990074 chrX 4997258 4997289 roo 9 7215 6.5 7.0 6.8 1.2 7246 chrX 4990043 intron CR44833 - chrX 4993666 intron CR44833 - chrX 4997289 intron CR44833 - chrX_9_4990001 chrX_4990001 KN35_1-HE 3055 chrX 5002083 5002096 chrX 5002153 5002182 5 83 1.5 7.5 4.5 0.9 99 chrX 5002083 intron CR44833 - chrX 5002132 intron CR44833 - chrX 5002182 intron CR44833 - chrX_5_5000001 chrX_5000001 KN35_1-HE 3056 chrX 5050143 5050166 chrX 5050220 5050243 6 77 0.5 2.0 1.2 2.7 100 chrX 5050143 intron,intron CR44833 -,ovo + chrX 5050193 intron,intron CR44833 -,ovo + chrX 5050243 intron,intron CR44833 -,ovo + chrX_6_5050001 chrX_5050001 KN35_1-HE 3057 chrX 5096286 5096306 chrX 5103852 5103872 springer 10 7566 0.0 7.0 3.5 2.2 7586 chrX 5096286 intron,intron CG15465 +,rg + chrX 5100079 intron,intron CG15465 +,rg + chrX 5103872 intron,intron CG15465 +,rg + chrX_10_5100001 chrX_5100001 KN35_1-HE 3058 chrX 5155265 5155277 chrX 5155347 5155359 5 82 3.5 4.5 4.0 1.0 94 chrX 5155265 intron,intron CG15465 +,rg + chrX 5155312 intron,intron CG15465 +,rg + chrX 5155359 intron,intron CG15465 +,rg + chrX_5_5155001 chrX_5155001 KN35_1-HE 3059 chrX 5162195 5162222 chrX 5162441 5162468 21 246 2.5 6.0 4.2 4.0 273 chrX 5162195 intron,intron CG15465 +,rg + chrX 5162332 intron,intron CG15465 +,rg + chrX 5162468 intron,intron CG15465 +,rg + chrX_21_5160001 chrX_5160001 KN35_1-HE 3060 chrX 5204673 5204700 chrX 5204757 5204783 6 84 6.5 7.5 7.0 0.8 110 chrX 5204673 intron,intron CG15465 +,rg + chrX 5204728 intron,intron CG15465 +,rg + chrX 5204783 intron,intron CG15465 +,rg + chrX_6_5200001 chrX_5200001 KN35_1-HE 3061 chrX 5284467 5284487 chrX 5284566 5284586 11 100 42.5 46.0 44.2 0.2 119 chrX 5284467 intergenic not near genes chrX 5284526 intergenic not near genes chrX 5284586 intergenic not near genes chrX_11_5280001 chrX_5280001 KN35_1-HE 3062 chrX 5291349 5291513 chrX 5291427 5291600 13 80 7.0 6.0 6.5 1.7 251 chrX 5291349 intergenic not near genes chrX 5291474 intergenic not near genes chrX 5291600 intergenic not near genes chrX_13_5290001 chrX_5290001 KN35_1-HE 3063 chrX 5338706 5338740 chrX 5339960 5339968 jockey 13 1252 3.5 8.0 5.8 1.9 1262 chrX 5338706 intergenic not near genes chrX 5339337 intergenic not near genes chrX 5339968 intergenic SK + chrX_13_5335001 chrX_5335001 KN35_1-HE 3064 chrX 5374650 5374663 chrX 5374758 5374771 8 108 9.5 7.0 8.2 0.9 121 chrX 5374650 intron SK + chrX 5374710 intron SK + chrX 5374771 intron SK + chrX_8_5370001 chrX_5370001 KN35_1-HE 3065 chrX 5456599 5456630 chrX 5456680 5456711 15 81 3.0 2.5 2.8 3.9 112 chrX 5456599 intron SPR + chrX 5456655 intron SPR + chrX 5456711 intron SPR + chrX_15_5455001 chrX_5455001 KN35_1-HE 3066 chrX 5474311 5474339 chrX 5474449 5474477 22 138 5.5 4.5 5.0 3.7 166 chrX 5474311 intron SPR + chrX 5474394 intron SPR + chrX 5474477 intron SPR + chrX_22_5470001 chrX_5470001 KN35_1-HE 3067 chrX 5497108 5497121 chrX 5497194 5497207 8 85 4.5 3.5 4.0 1.6 99 chrX 5497108 intergenic not near genes chrX 5497158 intergenic not near genes chrX 5497207 intergenic not near genes chrX_8_5495001 chrX_5495001 KN35_1-HE 3068 chrX 5524670 5524701 chrX 5524752 5524783 12 82 2.0 3.0 2.5 3.4 113 chrX 5524670 intergenic snoRNA:Psi28S-3342 - chrX 5524726 intergenic snoRNA:Psi28S-3342 - chrX 5524783 intergenic snoRNA:Psi28S-3342 - chrX_12_5520001 chrX_5520001 KN35_1-HE 3069 chrX 5524849 5524869 chrX 5528707 5528733 412 5 3863 3.0 2.5 2.8 1.3 3884 chrX 5524849 intergenic snoRNA:Psi28S-3342 - chrX 5526791 intergenic not near genes chrX 5528733 intergenic Vsx2 - chrX_5_5525001 chrX_5525001 KN35_1-HE 3070 chrX 5566774 5566787 chrX 5566856 5566871 11 83 5.5 13.5 9.5 1.0 97 chrX 5566774 intergenic not near genes chrX 5566822 intergenic not near genes chrX 5566871 intergenic not near genes chrX_11_5565001 chrX_5565001 KN35_1-HE 3071 chrX 5716055 5716071 chrX 5716134 5716150 4 79 0.0 6.5 3.2 1.0 95 chrX 5716055 intron CG33080 - chrX 5716102 intron CG33080 - chrX 5716150 intron CG33080 - chrX_4_5715001 chrX_5715001 KN35_1-HE 3072 chrX 5841833 5841863 chrX 5841910 5841940 8 77 0.5 0.0 0.2 6.7 107 chrX 5841833 intergenic not near genes chrX 5841886 intergenic not near genes chrX 5841940 intergenic not near genes chrX_8_5840001 chrX_5840001 KN35_1-HE 3073 chrX 5883826 5883841 chrX 5884068 5884083 pogo 5 242 5.0 8.0 6.5 0.7 257 chrX 5883826 intron CR45668 - chrX 5883954 intron CR45668 - chrX 5884083 intron CR45668 - chrX_5_5880001 chrX_5880001 KN35_1-HE 3074 chrX 5884162 5884173 chrX 5884404 5884415 pogo 7 242 4.0 2.0 3.0 1.8 253 chrX 5884162 intron CR45668 - chrX 5884288 intron CR45668 - chrX 5884415 intron CR45668 - chrX_7_5880001 chrX_5880001 KN35_1-HE 3075 chrX 5884174 5884192 chrX 5884403 5884434 pogo 10 240 0.5 2.0 1.2 4.5 260 chrX 5884174 intron CR45668 - chrX 5884304 intron CR45668 - chrX 5884434 intron CR45668 - chrX_10_5880001 chrX_5880001 KN35_1-HE 3076 chrX 5886459 5886497 chrX 5886546 5886584 23 87 2.5 0.0 1.2 10.5 125 chrX 5886459 intron CR45668 - chrX 5886522 intron CR45668 - chrX 5886584 intron CR45668 - chrX_23_5885001 chrX_5885001 KN35_1-HE 3077 chrX 6093321 6093330 chrX 6093401 6093410 4 80 1.5 4.0 2.8 1.1 89 chrX 6093321 intron Nep1 + chrX 6093366 intron Nep1 + chrX 6093410 intron Nep1 + chrX_4_6090001 chrX_6090001 KN35_1-HE 3078 chrX 6171584 6171615 chrX 6179016 6179047 Quasimodo 16 7432 4.0 7.5 5.8 2.4 7463 chrX 6171584 intron Ca-alpha1T - chrX 6175316 intron Ca-alpha1T - chrX 6179047 intron Ca-alpha1T - chrX_16_6175001 chrX_6175001 KN35_1-HE 3079 chrX 6179581 6179616 chrX 6179661 6179696 19 80 4.0 5.5 4.8 3.3 115 chrX 6179581 intron Ca-alpha1T - chrX 6179638 intron Ca-alpha1T - chrX 6179696 intron Ca-alpha1T - chrX_19_6175001 chrX_6175001 KN35_1-HE 3080 chrX 6232655 6232660 chrX 6232735 6232740 4 80 7.0 0.0 3.5 0.9 85 chrX 6232655 3` UTR CG14446 + chrX 6232698 3` UTR CG14446 + chrX 6232740 3` UTR CG14446 + chrX_4_6230001 chrX_6230001 KN35_1-HE 3081 chrX 6279978 6279999 chrX 6280060 6280081 9 82 2.5 0.5 1.5 3.6 103 chrX 6279978 5` UTR CR45530 + chrX 6280030 intergenic CR45530 +,Ubi-p5E - chrX 6280081 intergenic CR45530 +,Ubi-p5E - chrX_9_6280001 chrX_6280001 KN35_1-HE 3082 chrX 6335216 6335240 chrX 6337727 6337751 Tirant 14 2511 0.5 3.0 1.8 5.0 2535 chrX 6335216 intergenic not near genes chrX 6336484 intergenic not near genes chrX 6337751 intergenic CG3842 + chrX_14_6335001 chrX_6335001 KN35_1-HE 3083 chrX 6390204 6390216 chrX 6390286 6390296 6 81 6.5 9.0 7.8 0.7 92 chrX 6390204 intergenic not near genes chrX 6390250 intergenic not near genes chrX 6390296 intergenic not near genes chrX_6_6390001 chrX_6390001 KN35_1-HE 3084 chrX 6392868 6392903 chrX 6397634 6397669 Doc 9 4766 5.0 0.0 2.5 2.6 4801 chrX 6392868 intergenic not near genes chrX 6395268 intergenic not near genes chrX 6397669 intergenic not near genes chrX_9_6395001 chrX_6395001 KN35_1-HE 3085 chrX 6410083 6410120 chrX 6410173 6410210 8 90 0.0 2.5 1.2 3.6 127 chrX 6410083 intergenic not near genes chrX 6410146 intergenic not near genes chrX 6410210 intergenic not near genes chrX_8_6410001 chrX_6410001 KN35_1-HE 3086 chrX 6445325 6445332 chrX 6451084 6451091 297 4 5759 6.5 12.0 9.2 0.4 5766 chrX 6445325 intron CG42340 - chrX 6448208 intron CG42340 - chrX 6451091 intron CG42340 - chrX_4_6445001 chrX_6445001 KN35_1-HE 3087 chrX 6468632 6468646 chrX 6468713 6468727 6 81 8.5 2.0 5.2 1.0 95 chrX 6468632 intron CG42340 - chrX 6468680 intron CG42340 - chrX 6468727 intron CG42340 - chrX_6_6465001 chrX_6465001 KN35_1-HE 3088 chrX 6513203 6513232 chrX 6513660 6513689 19 456 7.0 4.5 5.8 2.8 486 chrX 6513203 intron CG42340 - chrX 6513446 intron CG42340 - chrX 6513689 intron CG42340 - chrX_19_6510001 chrX_6510001 KN35_1-HE 3089 chrX 6562816 6562847 chrX 6571299 6571330 Tirant 11 8483 3.5 4.0 3.8 2.3 8514 chrX 6562816 intron CG34417 + chrX 6567073 intron CG34417 + chrX 6571330 intron CG34417 + chrX_11_6565001 chrX_6565001 KN35_1-HE 3090 chrX 6629784 6629795 chrX 6629872 6629883 7 88 6.0 4.5 5.2 1.1 99 chrX 6629784 intron pigs + chrX 6629834 intron pigs + chrX 6629883 intron pigs + chrX_7_6625001 chrX_6625001 KN35_1-HE 3091 chrX 6737517 6737552 chrX 6737600 6737617 20 82 3.0 5.0 4.0 4.0 100 chrX 6737517 intron CG3168 - chrX 6737567 intron CG3168 - chrX 6737617 intron CG3168 - chrX_20_6735001 chrX_6735001 KN35_1-HE 3092 chrX 6865788 6865795 chrX 6865870 6865877 8 82 13.5 13.5 13.5 0.6 89 chrX 6865788 intron CG14434 - chrX 6865832 intron CG14434 - chrX 6865877 intron CG14434 - chrX_8_6865001 chrX_6865001 KN35_1-HE 3093 chrX 6887410 6887426 chrX 6887489 6887506 4 80 1.0 0.0 0.5 2.7 96 chrX 6887410 intergenic not near genes chrX 6887458 intergenic not near genes chrX 6887506 intergenic not near genes chrX_4_6885001 chrX_6885001 KN35_1-HE 3094 chrX 6897695 6897708 chrX 6897806 6897819 6 111 2.0 2.0 2.0 2.0 124 chrX 6897695 intergenic not near genes chrX 6897757 intergenic not near genes chrX 6897819 intergenic not near genes chrX_6_6895001 chrX_6895001 KN35_1-HE 3095 chrX 6979766 6979794 chrX 6979853 6979854 21 85 7.0 4.0 5.5 3.2 88 chrX 6979766 intron ogre - chrX 6979810 intron ogre - chrX 6979854 intron ogre - chrX_21_6975001 chrX_6975001 KN35_1-HE 3096 chrX 6989500 6989532 chrX 6989588 6989620 14 88 3.5 2.5 3.0 3.5 120 chrX 6989500 intron ogre - chrX 6989560 intron ogre - chrX 6989620 intron ogre - chrX_14_6985001 chrX_6985001 KN35_1-HE 3097 chrX 7023604 7023630 chrX 7030995 7031021 Tabor 9 7391 6.0 4.5 5.2 1.5 7417 chrX 7023604 intron CG12541 - chrX 7027312 intron CG12541 - chrX 7031021 intron CG12541 - chrX_9_7025001 chrX_7025001 KN35_1-HE 3098 chrX 7050882 7050909 chrX 7050962 7050971 9 78 7.5 6.0 6.8 1.2 89 chrX 7050882 intron CG12541 - chrX 7050926 intron CG12541 - chrX 7050971 intron CG12541 - chrX_9_7050001 chrX_7050001 KN35_1-HE 3099 chrX 7062467 7062473 chrX 7062548 7062554 4 81 0.5 5.0 2.8 1.1 87 chrX 7062467 intron CG12541 - chrX 7062510 intron CG12541 - chrX 7062554 intron CG12541 - chrX_4_7060001 chrX_7060001 KN35_1-HE 3100 chrX 7125245 7125278 chrX 7134405 7134438 roo 12 9160 4.0 9.0 6.5 1.6 9193 chrX 7125245 intergenic not near genes chrX 7129842 intergenic not near genes chrX 7134438 intergenic not near genes chrX_12_7125001 chrX_7125001 KN35_1-HE 3101 chrX 7156059 7156070 chrX 7156137 7156148 9 78 6.0 8.0 7.0 1.1 89 chrX 7156059 intron CG9650 + chrX 7156104 intron CG9650 + chrX 7156148 intron CG9650 + chrX_9_7155001 chrX_7155001 KN35_1-HE 3102 chrX 7560158 7560185 chrX 7560244 7560271 10 85 5.0 4.5 4.8 1.7 113 chrX 7560158 intergenic not near genes chrX 7560214 intergenic not near genes chrX 7560271 intergenic not near genes chrX_10_7560001 chrX_7560001 KN35_1-HE 3103 chrX 7681258 7681266 chrX 7681342 7681350 7 84 0.5 7.5 4.0 1.4 92 chrX 7681258 3` UTR CR45665 - chrX 7681304 intergenic CR45665 - chrX 7681350 intergenic CR45665 - chrX_7_7680001 chrX_7680001 KN35_1-HE 3104 chrX 7702503 7702526 chrX 7702602 7702625 16 99 8.5 9.5 9.0 1.6 122 chrX 7702503 intron CHES-1-like - chrX 7702564 intron CHES-1-like - chrX 7702625 intron CHES-1-like - chrX_16_7700001 chrX_7700001 KN35_1-HE 3105 chrX 7702905 7702940 chrX 7703345 7703380 jockey 28 440 9.0 12.0 10.5 2.4 475 chrX 7702905 intron CHES-1-like - chrX 7703142 intron CHES-1-like - chrX 7703380 intron CHES-1-like - chrX_28_7700001 chrX_7700001 KN35_1-HE 3106 chrX 7737164 7737184 chrX 7737247 7737267 9 83 8.5 6.0 7.2 1.1 103 chrX 7737164 5` UTR Tom40 + chrX 7737216 intron Tom40 + chrX 7737267 intron Tom40 + chrX_9_7735001 chrX_7735001 KN35_1-HE 3107 chrX 7784233 7784247 chrX 7784536 7784539 jockey 7 301 6.5 4.5 5.5 1.1 306 chrX 7784233 intergenic not near genes chrX 7784386 intergenic not near genes chrX 7784539 intergenic not near genes chrX_7_7780001 chrX_7780001 KN35_1-HE 3108 chrX 7845723 7845757 chrX 7847215 7847249 hopper2 10 1492 3.0 6.0 4.5 1.8 1526 chrX 7845723 intergenic not near genes chrX 7846486 intergenic not near genes chrX 7847249 intergenic not near genes chrX_10_7845001 chrX_7845001 KN35_1-HE 3109 chrX 7976133 7976137 chrX 7976309 7976315 4 178 3.0 9.0 6.0 0.6 182 chrX 7976133 intron sn + chrX 7976224 intron sn + chrX 7976315 intron sn + chrX_4_7975001 chrX_7975001 KN35_1-HE 3110 chrX 8013242 8013266 chrX 8013355 8013379 10 113 7.0 1.5 4.2 1.9 137 chrX 8013242 intron Tbh + chrX 8013310 intron Tbh + chrX 8013379 intron Tbh + chrX_10_8010001 chrX_8010001 KN35_1-HE 3111 chrX 8024277 8024311 chrX 8024386 8024420 18 109 3.0 4.0 3.5 4.0 143 chrX 8024277 exon Tbh + chrX 8024348 intron Tbh + chrX 8024420 intron Tbh + chrX_18_8020001 chrX_8020001 KN35_1-HE 3112 chrX 8031428 8031459 chrX 8035738 8035769 Juan 9 4310 7.0 5.5 6.2 1.2 4341 chrX 8031428 intergenic not near genes chrX 8033598 intergenic not near genes chrX 8035769 3` UTR CG2233 - chrX_9_8030001 chrX_8030001 KN35_1-HE 3113 chrX 8112554 8112581 chrX 8112650 8112677 5 96 4.0 4.0 4.0 1.0 123 chrX 8112554 intron Gclc - chrX 8112616 intron Gclc - chrX 8112677 intron Gclc - chrX_5_8110001 chrX_8110001 KN35_1-HE 3114 chrX 8138821 8138835 chrX 8138920 8138934 4 99 3.5 3.5 3.5 0.9 113 chrX 8138821 3` UTR Smox - chrX 8138878 3` UTR Smox - chrX 8138934 3` UTR Smox - chrX_4_8135001 chrX_8135001 KN35_1-HE 3115 chrX 8163863 8163883 chrX 8163954 8163973 10 91 0.5 6.5 3.5 2.2 110 chrX 8163863 intergenic CR45536 +,Or7a - chrX 8163918 intergenic Or7a -,CR45536 + chrX 8163973 intergenic Or7a -,CR45536 + chrX_10_8160001 chrX_8160001 KN35_1-HE 3116 chrX 8211231 8211239 chrX 8211309 8211317 9 78 11.0 8.5 9.8 0.8 86 chrX 8211231 intron sdt + chrX 8211274 intron sdt + chrX 8211317 intron sdt + chrX_9_8210001 chrX_8210001 KN35_1-HE 3117 chrX 8226555 8226587 chrX 8226856 8226888 16 301 4.0 3.0 3.5 3.6 333 chrX 8226555 intron sdt + chrX 8226722 intron sdt + chrX 8226888 intron sdt + chrX_16_8225001 chrX_8225001 KN35_1-HE 3118 chrX 8364842 8364876 chrX 8365240 8365274 BS 13 398 5.5 4.5 5.0 2.2 432 chrX 8364842 intron nAChRalpha3 - chrX 8365058 intron nAChRalpha3 - chrX 8365274 intron nAChRalpha3 - chrX_13_8365001 chrX_8365001 KN35_1-HE 3119 chrX 8371153 8371167 chrX 8371316 8371321 5 161 4.0 0.0 2.0 1.7 168 chrX 8371153 intergenic not near genes chrX 8371237 intergenic not near genes chrX 8371321 intergenic not near genes chrX_5_8370001 chrX_8370001 KN35_1-HE 3120 chrX 8393043 8393080 chrX 8393130 8393180 9 90 4.0 0.0 2.0 3.0 137 chrX 8393043 intergenic not near genes chrX 8393112 intergenic not near genes chrX 8393180 intergenic not near genes chrX_9_8390001 chrX_8390001 KN35_1-HE 3121 chrX 8515062 8515091 chrX 8515146 8515175 10 84 2.0 2.0 2.0 3.3 113 chrX 8515062 intron CG33181 + chrX 8515118 intron CG33181 + chrX 8515175 intron CG33181 + chrX_10_8515001 chrX_8515001 KN35_1-HE 3122 chrX 8544157 8544163 chrX 8544237 8544243 6 80 0.5 6.0 3.2 1.4 86 chrX 8544157 intron Nrg + chrX 8544200 intron Nrg + chrX 8544243 intron Nrg + chrX_6_8540001 chrX_8540001 KN35_1-HE 3123 chrX 8708692 8708717 chrX 8708874 8708899 16 182 17.0 15.0 16.0 0.9 207 chrX 8708692 intergenic not near genes chrX 8708796 intergenic not near genes chrX 8708899 intergenic not near genes chrX_16_8705001 chrX_8705001 KN35_1-HE 3124 chrX 8730448 8730468 chrX 8730525 8730545 15 77 0.0 8.5 4.2 2.9 97 chrX 8730448 intergenic not near genes chrX 8730496 intergenic not near genes chrX 8730545 intergenic not near genes chrX_15_8730001 chrX_8730001 KN35_1-HE 3125 chrX 8813322 8813331 chrX 8813400 8813409 4 78 7.5 5.5 6.5 0.5 87 chrX 8813322 intergenic not near genes chrX 8813366 intergenic not near genes chrX 8813409 intergenic not near genes chrX_4_8810001 chrX_8810001 KN35_1-HE 3126 chrX 8885678 8885716 chrX 8885942 8885980 19 264 46.5 53.5 50.0 0.4 302 chrX 8885678 intron Moe - chrX 8885829 intron Moe - chrX 8885980 intron Moe - chrX_19_8885001 chrX_8885001 KN35_1-HE 3127 chrX 8922324 8922363 chrX 8922759 8922798 jockey 31 435 6.5 5.5 6.0 4.4 474 chrX 8922324 intron rdgA + chrX 8922561 intron rdgA + chrX 8922798 intron rdgA + chrX_31_8920001 chrX_8920001 KN35_1-HE 3128 chrX 8927580 8927613 chrX 8929851 8929884 NOF 16 2271 4.5 5.5 5.0 2.7 2304 chrX 8927580 intron rdgA + chrX 8928732 intron rdgA + chrX 8929884 intron rdgA + chrX_16_8925001 chrX_8925001 KN35_1-HE 3129 chrX 8948760 8948792 chrX 8956271 8956303 roo 15 7511 3.5 4.5 4.0 3.0 7543 chrX 8948760 intron rdgA + chrX 8952532 intron rdgA + chrX 8956303 intron rdgA + chrX_15_8950001 chrX_8950001 KN35_1-HE 3130 chrX 8956606 8956637 chrX 8956687 8956718 8 81 2.0 3.5 2.8 2.1 112 chrX 8956606 intron rdgA + chrX 8956662 intron rdgA + chrX 8956718 intron rdgA + chrX_8_8955001 chrX_8955001 KN35_1-HE 3131 chrX 8958044 8958069 chrX 8958125 8958148 10 81 1.0 4.5 2.8 2.6 104 chrX 8958044 intron rdgA + chrX 8958096 intron rdgA + chrX 8958148 intron rdgA + chrX_10_8955001 chrX_8955001 KN35_1-HE 3132 chrX 8968846 8968860 chrX 8968942 8968956 7 96 8.5 8.5 8.5 0.7 110 chrX 8968846 intron rdgA + chrX 8968901 intron rdgA + chrX 8968956 intron rdgA + chrX_7_8965001 chrX_8965001 KN35_1-HE 3133 chrX 8979995 8980003 chrX 8980077 8980085 5 82 7.5 0.0 3.8 1.0 90 chrX 8979995 intron,intron rdgA +,CR43836 - chrX 8980040 intron,intron rdgA +,CR43836 - chrX 8980085 intron,intron rdgA +,CR43836 - chrX_5_8980001 chrX_8980001 KN35_1-HE 3134 chrX 8994885 8994902 chrX 8994968 8994985 9 83 1.5 4.0 2.8 2.4 100 chrX 8994885 intron,intron rdgA +,CR43836 - chrX 8994935 intron,intron rdgA +,CR43836 - chrX 8994985 intron,intron rdgA +,CR43836 - chrX_9_8990001 chrX_8990001 KN35_1-HE 3135 chrX 9004103 9004125 chrX 9004184 9004206 5 81 2.0 6.0 4.0 1.0 103 chrX 9004103 intron,intron rdgA +,CR43836 - chrX 9004154 intron,intron rdgA +,CR43836 - chrX 9004206 intron,intron rdgA +,CR43836 - chrX_5_9000001 chrX_9000001 KN35_1-HE 3136 chrX 9131004 9131009 chrX 9131112 9131117 7 108 0.0 12.5 6.2 1.0 113 chrX 9131004 intron fend - chrX 9131060 intron fend - chrX 9131117 intron fend - chrX_7_9130001 chrX_9130001 KN35_1-HE 3137 chrX 9214976 9215006 chrX 9215057 9215087 13 81 0.0 3.0 1.5 5.2 111 chrX 9214976 intron Obp8a + chrX 9215032 intron Obp8a + chrX 9215087 intron Obp8a + chrX_13_9215001 chrX_9215001 KN35_1-HE 3138 chrX 9292446 9292458 chrX 9292620 9292632 4 174 0.0 4.5 2.2 1.2 186 chrX 9292446 intron lz + chrX 9292539 intron lz + chrX 9292632 intron lz + chrX_4_9290001 chrX_9290001 KN35_1-HE 3139 chrX 9337939 9337973 chrX 9338032 9338066 17 93 4.5 4.5 4.5 3.1 127 chrX 9337939 intron CG34449 - chrX 9338002 intron CG34449 - chrX 9338066 exon CG34449 - chrX_17_9335001 chrX_9335001 KN35_1-HE 3140 chrX 9508135 9508166 chrX 9509654 9509685 jockey 9 1518 4.0 7.5 5.8 1.3 1550 chrX 9508135 intron CG32700 - chrX 9508910 intron CG32700 - chrX 9509685 intron CG32700 - chrX_9_9505001 chrX_9505001 KN35_1-HE 3141 chrX 9575788 9575824 chrX 9576113 9576149 mdg3 11 325 4.0 4.0 4.0 2.2 361 chrX 9575788 intron,exon CG32699 -,CG42395 - chrX 9575968 intron,intron CG32699 -,CG42395 - chrX 9576149 intron,5` UTR CG32699 -,CG42395 - chrX_11_9575001 chrX_9575001 KN35_1-HE 3142 chrX 9592371 9592394 chrX 9592458 9592481 6 87 4.5 4.0 4.2 1.2 110 chrX 9592371 intergenic not near genes chrX 9592426 intergenic not near genes chrX 9592481 intergenic not near genes chrX_6_9590001 chrX_9590001 KN35_1-HE 3143 chrX 9706397 9706428 chrX 9706476 9706507 15 79 2.5 2.0 2.2 4.7 110 chrX 9706397 intergenic not near genes chrX 9706452 intergenic not near genes chrX 9706507 intergenic not near genes chrX_15_9705001 chrX_9705001 KN35_1-HE 3144 chrX 9744055 9744058 chrX 12649914 12649914 gypsy5 4 2905858 21.0 9.0 15.0 0.2 2905859 chrX 9744055 intron Sp1 + chrX 11196984 intergenic not near genes chrX 12649914 intron Tomosyn + chrX_4_11195001 chrX_11195001 KN35_1-HE 3145 chrX 9770496 9770508 chrX 9770577 9770589 5 81 0.0 2.5 1.2 2.3 93 chrX 9770496 intergenic not near genes chrX 9770542 intergenic not near genes chrX 9770589 intergenic not near genes chrX_5_9770001 chrX_9770001 KN35_1-HE 3146 chrX 9839375 9839380 chrX 9839459 9839464 5 84 0.0 7.0 3.5 1.1 89 chrX 9839375 intron CG32698 + chrX 9839420 intron CG32698 + chrX 9839464 intron CG32698 + chrX_5_9835001 chrX_9835001 KN35_1-HE 3147 chrX 9855637 9855668 chrX 9855737 9855768 9 100 2.0 2.0 2.0 3.0 131 chrX 9855637 intergenic not near genes chrX 9855702 intergenic not near genes chrX 9855768 intergenic not near genes chrX_9_9855001 chrX_9855001 KN35_1-HE 3148 chrX 9864178 9864210 chrX 9864274 9864306 12 96 3.5 6.0 4.8 2.1 128 chrX 9864178 intergenic not near genes chrX 9864242 intergenic not near genes chrX 9864306 intergenic not near genes chrX_12_9860001 chrX_9860001 KN35_1-HE 3149 chrX 9899894 9899925 chrX 9900022 9900053 21 128 6.5 3.0 4.8 3.6 159 chrX 9899894 intergenic CG15249 - chrX 9899974 intergenic CG15249 - chrX 9900053 intergenic CG15249 - chrX_21_9895001 chrX_9895001 KN35_1-HE 3150 chrX 9912447 9912466 chrX 9912526 9912545 13 79 5.0 6.5 5.8 1.9 98 chrX 9912447 intergenic not near genes chrX 9912496 intergenic not near genes chrX 9912545 intergenic not near genes chrX_13_9910001 chrX_9910001 KN35_1-HE 3151 chrX 9947093 9947096 chrX 22442905 22442908 5 12495812 10.0 16.5 13.2 0.4 12495815 chrX 9947093 intergenic not near genes chrX 16195000 intergenic not near genes chrX 22442908 intergenic not near genes chrX_5_16195001 chrX_16195001 KN35_1-HE 3152 chrX 10130778 10130812 chrX 10130856 10130893 14 76 1.5 2.0 1.8 5.0 115 chrX 10130778 intron,intron RhoU +,CR44894 - chrX 10130836 intron,intron RhoU +,CR44894 - chrX 10130893 intron,intron RhoU +,CR44894 - chrX_14_10130001 chrX_10130001 KN35_1-HE 3153 chrX 10138214 10138248 chrX 10145719 10145753 412 10 7505 5.5 2.0 3.8 2.1 7539 chrX 10138214 intron,intron RhoU +,CR44894 - chrX 10141984 intron,intron RhoU +,CR44894 - chrX 10145753 intron,intron RhoU +,CR44894 - chrX_10_10140001 chrX_10140001 KN35_1-HE 3154 chrX 10154283 10154313 chrX 10154360 10154390 15 77 4.5 3.0 3.8 3.1 107 chrX 10154283 intron,intron CR44894 -,CG12645 + chrX 10154336 intron,intron CR44894 -,CG12645 + chrX 10154390 intron,exon CR44894 -,CG12645 + chrX_15_10150001 chrX_10150001 KN35_1-HE 3155 chrX 10162638 10162663 chrX 10163021 10163046 14 383 5.0 4.5 4.8 2.4 408 chrX 10162638 intron,intron CR44894 -,CG43902 + chrX 10162842 intron,intron CR44894 -,CG43902 + chrX 10163046 intron,intron CR44894 -,CG43902 + chrX_14_10160001 chrX_10160001 KN35_1-HE 3156 chrX 10178676 10178706 chrX 10178769 10178799 16 92 3.0 4.0 3.5 3.6 123 chrX 10178676 intron,intron CR44894 -,CG43902 + chrX 10178738 intron,intron CR44894 -,CG43902 + chrX 10178799 intron,intron CR44894 -,CG43902 + chrX_16_10175001 chrX_10175001 KN35_1-HE 3157 chrX 10182991 10183002 chrX 10183079 10183090 7 88 7.5 6.0 6.8 0.9 99 chrX 10182991 intron,intron CR44894 -,CG43902 + chrX 10183040 intron,intron CR44894 -,CG43902 + chrX 10183090 intron,intron CR44894 -,CG43902 + chrX_7_10180001 chrX_10180001 KN35_1-HE 3158 chrX 10243023 10243046 chrX 10243113 10243136 13 90 6.5 6.5 6.5 1.7 113 chrX 10243023 intron Hk - chrX 10243080 intron Hk - chrX 10243136 intron Hk - chrX_13_10240001 chrX_10240001 KN35_1-HE 3159 chrX 10248637 10248663 chrX 10248715 10248741 10 78 2.0 4.0 3.0 2.5 104 chrX 10248637 intron Hk - chrX 10248689 intron Hk - chrX 10248741 intron Hk - chrX_10_10245001 chrX_10245001 KN35_1-HE 3160 chrX 10267301 10267336 chrX 10276452 10276487 roo 23 9151 2.5 5.0 3.8 4.8 9186 chrX 10267301 3` UTR alpha-Man-I - chrX 10271894 intron alpha-Man-I - chrX 10276487 3` UTR alpha-Man-I - chrX_23_10270001 chrX_10270001 KN35_1-HE 3161 chrX 10286354 10286364 chrX 10286433 10286443 10 79 3.0 5.0 4.0 2.0 89 chrX 10286354 intron alpha-Man-I - chrX 10286398 intron alpha-Man-I - chrX 10286443 intron alpha-Man-I - chrX_10_10285001 chrX_10285001 KN35_1-HE 3162 chrX 10317556 10317582 chrX 10317635 10317661 9 79 1.0 0.5 0.8 5.0 105 chrX 10317556 intron alpha-Man-I - chrX 10317608 intron alpha-Man-I - chrX 10317661 intron alpha-Man-I - chrX_9_10315001 chrX_10315001 KN35_1-HE 3163 chrX 10333436 10333464 chrX 10333526 10333553 4 90 2.0 3.5 2.8 1.1 117 chrX 10333436 intergenic CG43740 + chrX 10333494 intergenic CG43740 + chrX 10333553 intergenic CG43740 + chrX_4_10330001 chrX_10330001 KN35_1-HE 3164 chrX 10364608 10364636 chrX 10364710 10364738 11 102 2.0 5.0 3.5 2.4 130 chrX 10364608 intron l(1)G0289 - chrX 10364673 intron l(1)G0289 - chrX 10364738 intron l(1)G0289 - chrX_11_10360001 chrX_10360001 KN35_1-HE 3165 chrX 10420223 10420239 chrX 10420309 10420325 10 86 0.0 6.5 3.2 2.4 102 chrX 10420223 intron CG32683 - chrX 10420274 intron CG32683 - chrX 10420325 intron CG32683 - chrX_10_10420001 chrX_10420001 KN35_1-HE 3166 chrX 10431335 10431366 chrX 10431416 10431447 7 81 3.5 2.5 3.0 1.8 112 chrX 10431335 intron CG32683 - chrX 10431391 intron CG32683 - chrX 10431447 intron CG32683 - chrX_7_10430001 chrX_10430001 KN35_1-HE 3167 chrX 10487607 10487617 chrX 10487704 10487715 8 98 2.5 1.0 1.8 2.9 108 chrX 10487607 intergenic CG32687 - chrX 10487661 intergenic CG32687 - chrX 10487715 intergenic not near genes chrX_8_10485001 chrX_10485001 KN35_1-HE 3168 chrX 10506499 10506528 chrX 10506587 10506616 11 88 2.5 4.0 3.2 2.6 117 chrX 10506499 intron spri - chrX 10506558 intron spri - chrX 10506616 intron spri - chrX_11_10505001 chrX_10505001 KN35_1-HE 3169 chrX 10532502 10532528 chrX 10532582 10532608 14 80 8.0 5.0 6.5 1.9 106 chrX 10532502 intron spri - chrX 10532555 intron spri - chrX 10532608 intron spri - chrX_14_10530001 chrX_10530001 KN35_1-HE 3170 chrX 10536655 10536688 chrX 10536808 10536849 4 155 1.5 0.5 1.0 2.0 194 chrX 10536655 intron spri - chrX 10536752 intron spri - chrX 10536849 intron spri - chrX_4_10535001 chrX_10535001 KN35_1-HE 3171 chrX 10550344 10550366 chrX 10550423 10550445 11 79 3.0 7.0 5.0 1.8 101 chrX 10550344 intron spri - chrX 10550394 intron spri - chrX 10550445 intron spri - chrX_11_10550001 chrX_10550001 KN35_1-HE 3172 chrX 10550852 10550883 chrX 10552320 10552351 hobo 15 1468 5.5 3.0 4.2 2.9 1499 chrX 10550852 intron spri - chrX 10551602 intron spri - chrX 10552351 intron spri - chrX_15_10550001 chrX_10550001 KN35_1-HE 3173 chrX 10580120 10580137 chrX 10580198 10580215 8 78 4.5 2.0 3.2 1.9 95 chrX 10580120 intron spri - chrX 10580168 intron spri - chrX 10580215 intron spri - chrX_8_10580001 chrX_10580001 KN35_1-HE 3174 chrX 10651630 10651646 chrX 10651747 10651763 10 117 1.5 8.5 5.0 1.7 133 chrX 10651630 intron X11Lbeta + chrX 10651696 intron X11Lbeta + chrX 10651763 intron X11Lbeta + chrX_10_10650001 chrX_10650001 KN35_1-HE 3175 chrX 10664442 10664477 chrX 10664523 10664558 15 81 5.5 4.5 5.0 2.5 116 chrX 10664442 intron X11Lbeta + chrX 10664500 intron X11Lbeta + chrX 10664558 intron X11Lbeta + chrX_15_10660001 chrX_10660001 KN35_1-HE 3176 chrX 10686063 10686082 chrX 10691193 10691212 roo 10 5130 6.0 1.0 3.5 2.2 5149 chrX 10686063 intron X11Lbeta + chrX 10688638 intron X11Lbeta + chrX 10691212 intron X11Lbeta + chrX_10_10685001 chrX_10685001 KN35_1-HE 3177 chrX 10694149 10694184 chrX 10694230 10694265 25 81 7.5 8.5 8.0 2.8 116 chrX 10694149 intron X11Lbeta + chrX 10694207 intron X11Lbeta + chrX 10694265 intron X11Lbeta + chrX_25_10690001 chrX_10690001 KN35_1-HE 3178 chrX 10723591 10723626 chrX 10723674 10723709 11 83 2.0 1.0 1.5 4.4 118 chrX 10723591 intron CG32676 - chrX 10723650 intron CG32676 - chrX 10723709 intron CG32676 - chrX_11_10720001 chrX_10720001 KN35_1-HE 3179 chrX 10772680 10772693 chrX 10772760 10772777 Tirant 5 83 4.0 0.5 2.2 1.6 97 chrX 10772680 intron CG15211 + chrX 10772728 intron CG15211 + chrX 10772777 intron CG15211 + chrX_5_10770001 chrX_10770001 KN35_1-HE 3180 chrX 10803038 10803049 chrX 10803118 10803128 5 80 9.0 7.5 8.2 0.5 90 chrX 10803038 intron Imp - chrX 10803083 intron Imp - chrX 10803128 intron Imp - chrX_5_10800001 chrX_10800001 KN35_1-HE 3181 chrX 10874040 10874068 chrX 10874125 10874153 10 85 2.5 3.0 2.8 2.6 113 chrX 10874040 intron CG1637 - chrX 10874096 intron CG1637 - chrX 10874153 intron CG1637 - chrX_10_10870001 chrX_10870001 KN35_1-HE 3182 chrX 11082186 11082217 chrX 11082541 11082572 11 355 2.0 5.5 3.8 2.3 386 chrX 11082186 intron sev - chrX 11082379 intron sev - chrX 11082572 intron sev - chrX_11_11080001 chrX_11080001 KN35_1-HE 3183 chrX 11124044 11124055 chrX 11124121 11124132 4 76 3.0 5.5 4.2 0.8 88 chrX 11124044 5` UTR CG11122 - chrX 11124088 5` UTR CG11122 - chrX 11124132 5` UTR CG11122 - chrX_4_11120001 chrX_11120001 KN35_1-HE 3184 chrX 11141988 11142092 chrX 11142065 11142169 8 77 0.0 0.0 0.0 8.0 181 chrX 11141988 intergenic CG15199 - chrX 11142078 intergenic CG15199 -,CG15202 + chrX 11142169 intergenic CG15199 -,CG15202 + chrX_8_11140001 chrX_11140001 KN35_1-HE 3185 chrX 11184260 11184283 chrX 11189337 11189360 flea 6 5075 5.5 8.0 6.8 0.8 5100 chrX 11184260 intergenic not near genes chrX 11186810 intergenic not near genes chrX 11189360 intergenic not near genes chrX_6_11185001 chrX_11185001 KN35_1-HE 3186 chrX 11194452 11194460 chrX 11201858 11201882 gypsy5 5 7419 3.0 9.0 6.0 0.7 7430 chrX 11194452 intergenic not near genes chrX 11198167 intergenic not near genes chrX 11201882 intergenic CG11106 + chrX_5_11195001 chrX_11195001 KN35_1-HE 3187 chrX 11268559 11268594 chrX 11270053 11270088 hopper2 16 1494 3.5 8.5 6.0 2.3 1529 chrX 11268559 intron CG44422 - chrX 11269324 intron CG44422 - chrX 11270088 intron CG44422 - chrX_16_11265001 chrX_11265001 KN35_1-HE 3188 chrX 11287173 11287203 chrX 11287260 11287290 6 87 1.5 3.5 2.5 1.7 117 chrX 11287173 intron CG44422 - chrX 11287232 intron CG44422 - chrX 11287290 intron CG44422 - chrX_6_11285001 chrX_11285001 KN35_1-HE 3189 chrX 11307359 11307367 chrX 11307446 11307454 6 87 5.5 12.5 9.0 0.6 95 chrX 11307359 intergenic not near genes chrX 11307406 intergenic not near genes chrX 11307454 intergenic not near genes chrX_6_11305001 chrX_11305001 KN35_1-HE 3190 chrX 11312072 11312092 chrX 11319425 11319438 Stalker2 10 7351 2.5 7.5 5.0 1.7 7366 chrX 11312072 intergenic not near genes chrX 11315755 intergenic not near genes chrX 11319438 intergenic not near genes chrX_10_11315001 chrX_11315001 KN35_1-HE 3191 chrX 11385504 11385533 chrX 11385584 11385613 13 80 6.5 4.5 5.5 2.0 109 chrX 11385504 intron dlg1 + chrX 11385558 intron dlg1 + chrX 11385613 intron dlg1 + chrX_13_11385001 chrX_11385001 KN35_1-HE 3192 chrX 11431612 11431629 chrX 11431700 11431717 5 88 0.0 4.5 2.2 1.6 105 chrX 11431612 3` UTR Evi5 - chrX 11431664 3` UTR Evi5 - chrX 11431717 3` UTR Evi5 - chrX_5_11430001 chrX_11430001 KN35_1-HE 3193 chrX 11442006 11442024 chrX 11442084 11442102 5 78 1.0 2.0 1.5 2.0 96 chrX 11442006 intron Evi5 - chrX 11442054 intron Evi5 - chrX 11442102 intron Evi5 - chrX_5_11440001 chrX_11440001 KN35_1-HE 3194 chrX 11535041 11535044 chrX 11541512 11541514 Burdock 5 6471 9.5 5.0 7.2 0.6 6473 chrX 11535041 intron Drak + chrX 11538278 intron Drak + chrX 11541514 intron Drak + chrX_5_11535001 chrX_11535001 KN35_1-HE 3195 chrX 11571452 11571485 chrX 11571694 11571727 pogo 15 242 2.0 5.5 3.8 3.1 275 chrX 11571452 3` UTR Kmn1 - chrX 11571590 3` UTR Kmn1 - chrX 11571727 3` UTR Kmn1 - chrX_15_11570001 chrX_11570001 KN35_1-HE 3196 chrX 11610897 11610928 chrX 11610994 11611025 11 97 1.5 2.5 2.0 3.7 128 chrX 11610897 intron CG2247 - chrX 11610961 intron CG2247 - chrX 11611025 intron CG2247 - chrX_11_11610001 chrX_11610001 KN35_1-HE 3197 chrX 11627187 11627222 chrX 11627265 11627302 6 79 0.0 1.5 0.8 3.3 115 chrX 11627187 intron Ptp10D + chrX 11627244 intron Ptp10D + chrX 11627302 intron Ptp10D + chrX_6_11625001 chrX_11625001 KN35_1-HE 3198 chrX 11628512 11628535 chrX 11628608 11628631 6 96 2.0 8.5 5.2 1.0 119 chrX 11628512 intron Ptp10D + chrX 11628572 intron Ptp10D + chrX 11628631 intron Ptp10D + chrX_6_11625001 chrX_11625001 KN35_1-HE 3199 chrX 11633434 11633442 chrX 11640493 11640501 297 6 7059 5.5 5.5 5.5 0.9 7067 chrX 11633434 intron Ptp10D + chrX 11636968 intron Ptp10D + chrX 11640501 intron Ptp10D + chrX_6_11635001 chrX_11635001 KN35_1-HE 3200 chrX 11641011 11641046 chrX 11641108 11641143 30 97 1.5 6.5 4.0 6.0 132 chrX 11641011 intron Ptp10D + chrX 11641077 intron Ptp10D + chrX 11641143 intron Ptp10D + chrX_30_11640001 chrX_11640001 KN35_1-HE 3201 chrX 11645138 11645144 chrX 11648306 11648312 NOF 5 3168 3.0 3.0 3.0 1.2 3174 chrX 11645138 intron Ptp10D + chrX 11646725 intron Ptp10D + chrX 11648312 intron Ptp10D + chrX_5_11645001 chrX_11645001 KN35_1-HE 3202 chrX 11655643 11655677 chrX 11655726 11655760 18 82 5.5 3.0 4.2 3.5 117 chrX 11655643 intron Ptp10D + chrX 11655702 intron Ptp10D + chrX 11655760 intron Ptp10D + chrX_18_11655001 chrX_11655001 KN35_1-HE 3203 chrX 11670066 11670095 chrX 11670177 11670206 16 111 5.5 3.0 4.2 3.1 140 chrX 11670066 intron Ptp10D + chrX 11670136 intron Ptp10D + chrX 11670206 intron Ptp10D + chrX_16_11670001 chrX_11670001 KN35_1-HE 3204 chrX 11672031 11672038 chrX 11672164 11672171 5 133 1.5 0.0 0.8 2.8 140 chrX 11672031 intron Ptp10D + chrX 11672101 intron Ptp10D + chrX 11672171 intron Ptp10D + chrX_5_11670001 chrX_11670001 KN35_1-HE 3205 chrX 11715702 11715736 chrX 11715780 11715814 21 78 2.5 5.0 3.8 4.4 112 chrX 11715702 intergenic CR45618 - chrX 11715758 intergenic CR45618 - chrX 11715814 intergenic CR45618 - chrX_21_11715001 chrX_11715001 KN35_1-HE 3206 chrX 11787018 11787053 chrX 11787111 11787146 24 93 6.0 9.0 7.5 2.8 128 chrX 11787018 intergenic Karl + chrX 11787082 intergenic Karl + chrX 11787146 intergenic Karl + chrX_24_11785001 chrX_11785001 KN35_1-HE 3207 chrX 11799017 11799038 chrX 11799104 11799125 9 87 3.5 10.0 6.8 1.2 108 chrX 11799017 intron CkIIbeta + chrX 11799071 intron CkIIbeta + chrX 11799125 intron CkIIbeta + chrX_9_11795001 chrX_11795001 KN35_1-HE 3208 chrX 11801592 11801596 chrX 11801669 11801673 5 77 3.5 4.5 4.0 1.0 81 chrX 11801592 intergenic CkIIbeta +,Hsc70-3 - chrX 11801632 intergenic CkIIbeta +,Hsc70-3 - chrX 11801673 intergenic Hsc70-3 -,CkIIbeta + chrX_5_11800001 chrX_11800001 KN35_1-HE 3209 chrX 11848768 11848794 chrX 11848849 11848875 13 81 0.0 0.0 0.0 13.0 107 chrX 11848768 intergenic not near genes chrX 11848822 intergenic not near genes chrX 11848875 intergenic not near genes chrX_13_11845001 chrX_11845001 KN35_1-HE 3210 chrX 11963752 11963754 chrX 11963843 11963847 4 92 13.5 0.0 6.8 0.5 95 chrX 11963752 intron cac - chrX 11963800 intron cac - chrX 11963847 intron cac - chrX_4_11960001 chrX_11960001 KN35_1-HE 3211 chrX 11999758 11999781 chrX 11999842 11999865 12 83 4.0 5.0 4.5 2.2 107 chrX 11999758 intron fw - chrX 11999812 intron fw - chrX 11999865 intron fw - chrX_12_11995001 chrX_11995001 KN35_1-HE 3212 chrX 12014060 12014277 chrX 12014153 12014356 10 90 3.0 3.0 3.0 2.5 296 chrX 12014060 intron regucalcin + chrX 12014208 intron regucalcin + chrX 12014356 intron regucalcin + chrX_10_12010001 chrX_12010001 KN35_1-HE 3213 chrX 12043699 12043704 chrX 12043936 12043941 4 237 7.0 26.0 16.5 0.2 242 chrX 12043699 5` UTR,5` UTR CR43960 +,Ten-a + chrX 12043820 5` UTR,5` UTR CR43960 +,Ten-a + chrX 12043941 5` UTR,5` UTR CR43960 +,Ten-a + chrX_4_12040001 chrX_12040001 KN35_1-HE 3214 chrX 12054930 12054942 chrX 12055016 12055025 6 86 8.5 5.5 7.0 0.8 95 chrX 12054930 intron,intron CR43960 +,Ten-a + chrX 12054978 intron,intron CR43960 +,Ten-a + chrX 12055025 intron,intron CR43960 +,Ten-a + chrX_6_12050001 chrX_12050001 KN35_1-HE 3215 chrX 12090374 12090389 chrX 12090458 12090473 6 84 0.0 12.0 6.0 0.9 99 chrX 12090374 intron,intron CR43960 +,Ten-a + chrX 12090424 intron,intron CR43960 +,Ten-a + chrX 12090473 intron,intron CR43960 +,Ten-a + chrX_6_12090001 chrX_12090001 KN35_1-HE 3216 chrX 12168136 12168166 chrX 12173579 12173609 I-element 12 5442 7.5 10.0 8.8 1.2 5473 chrX 12168136 intron Ten-a + chrX 12170872 intron Ten-a + chrX 12173609 intron Ten-a + chrX_12_12170001 chrX_12170001 KN35_1-HE 3217 chrX 12178977 12179013 chrX 12179142 12179177 24 165 4.5 6.0 5.2 3.9 200 chrX 12178977 intron Ten-a + chrX 12179077 intron Ten-a + chrX 12179177 intron Ten-a + chrX_24_12175001 chrX_12175001 KN35_1-HE 3218 chrX 12200561 12200573 chrX 12200640 12200653 6 80 6.5 4.0 5.2 1.0 92 chrX 12200561 intron Ten-a + chrX 12200607 intron Ten-a + chrX 12200653 intron Ten-a + chrX_6_12200001 chrX_12200001 KN35_1-HE 3219 chrX 12202293 12202323 chrX 12202385 12202415 19 92 5.0 0.0 2.5 5.4 122 chrX 12202293 intron Ten-a + chrX 12202354 intron Ten-a + chrX 12202415 intron Ten-a + chrX_19_12200001 chrX_12200001 KN35_1-HE 3220 chrX 12202769 12202800 chrX 12202854 12202885 9 85 2.5 4.0 3.2 2.1 116 chrX 12202769 intron Ten-a + chrX 12202827 intron Ten-a + chrX 12202885 intron Ten-a + chrX_9_12200001 chrX_12200001 KN35_1-HE 3221 chrX 12301955 12301971 chrX 12303262 12303278 X-element 5 1307 4.5 1.5 3.0 1.2 1323 chrX 12301955 intron Ten-a + chrX 12302616 intron Ten-a + chrX 12303278 intron Ten-a + chrX_5_12300001 chrX_12300001 KN35_1-HE 3222 chrX 12375494 12375503 chrX 12375593 12375602 7 98 0.0 4.0 2.0 2.3 108 chrX 12375494 intergenic Ir11a - chrX 12375548 intergenic Ir11a - chrX 12375602 exon Ir11a - chrX_7_12375001 chrX_12375001 KN35_1-HE 3223 chrX 12392807 12392830 chrX 12392889 12392912 9 82 3.5 2.0 2.8 2.4 105 chrX 12392807 intergenic not near genes chrX 12392860 intergenic not near genes chrX 12392912 intergenic not near genes chrX_9_12390001 chrX_12390001 KN35_1-HE 3224 chrX 12405479 12405495 chrX 12405864 12405880 6 385 5.0 9.5 7.2 0.7 401 chrX 12405479 intron CG32651 - chrX 12405680 3` UTR CG32651 - chrX 12405880 3` UTR CG32651 - chrX_6_12405001 chrX_12405001 KN35_1-HE 3225 chrX 12423308 12423347 chrX 12423389 12423428 7 81 8.0 2.5 5.2 1.1 120 chrX 12423308 intergenic not near genes chrX 12423368 intergenic not near genes chrX 12423428 intergenic not near genes chrX_7_12420001 chrX_12420001 KN35_1-HE 3226 chrX 12430946 12430961 chrX 12431025 12431040 4 79 2.0 5.5 3.8 0.8 94 chrX 12430946 intergenic not near genes chrX 12430993 intergenic not near genes chrX 12431040 intergenic not near genes chrX_4_12430001 chrX_12430001 KN35_1-HE 3227 chrX 12436339 12436350 chrX 12436417 12436428 9 78 0.5 0.0 0.2 7.5 89 chrX 12436339 intron Pkcdelta + chrX 12436384 intron Pkcdelta + chrX 12436428 intron Pkcdelta + chrX_9_12435001 chrX_12435001 KN35_1-HE 3228 chrX 12438798 12438825 chrX 12438878 12438905 10 80 3.0 2.0 2.5 2.9 107 chrX 12438798 intron Pkcdelta + chrX 12438852 intron Pkcdelta + chrX 12438905 intron Pkcdelta + chrX_10_12435001 chrX_12435001 KN35_1-HE 3229 chrX 12442084 12442117 chrX 12442167 12442200 19 83 2.5 0.0 1.2 8.6 116 chrX 12442084 intron Pkcdelta + chrX 12442142 intron Pkcdelta + chrX 12442200 intron Pkcdelta + chrX_19_12440001 chrX_12440001 KN35_1-HE 3230 chrX 12511324 12511342 chrX 12511414 12511432 6 90 4.5 4.0 4.2 1.2 108 chrX 12511324 intron CG2556 + chrX 12511378 intron CG2556 + chrX 12511432 intron CG2556 + chrX_6_12510001 chrX_12510001 KN35_1-HE 3231 chrX 12536000 12536002 chrX 12536085 12536087 4 85 0.0 6.0 3.0 1.0 87 chrX 12536000 intron CG43921 - chrX 12536044 intron CG43921 - chrX 12536087 intron CG43921 - chrX_4_12535001 chrX_12535001 KN35_1-HE 3232 chrX 12641950 12641969 chrX 12642072 12642091 20 122 29.5 45.0 37.2 0.5 141 chrX 12641950 intron Tomosyn + chrX 12642020 intron Tomosyn + chrX 12642091 intron Tomosyn + chrX_20_12640001 chrX_12640001 KN35_1-HE 3233 chrX 12643231 12643264 chrX 12643326 12643359 21 95 7.0 3.5 5.2 3.4 128 chrX 12643231 intron Tomosyn + chrX 12643295 intron Tomosyn + chrX 12643359 intron Tomosyn + chrX_21_12640001 chrX_12640001 KN35_1-HE 3234 chrX 12670630 12670662 chrX 12670718 12670749 16 88 8.0 2.0 5.0 2.7 119 chrX 12670630 intron Tis11 + chrX 12670690 intron Tis11 + chrX 12670749 intron Tis11 + chrX_16_12670001 chrX_12670001 KN35_1-HE 3235 chrX 12709695 12709732 chrX 12709773 12709792 12 76 4.5 2.5 3.5 2.7 97 chrX 12709695 intron Smr - chrX 12709744 intron Smr - chrX 12709792 intron Smr - chrX_12_12705001 chrX_12705001 KN35_1-HE 3236 chrX 12752282 12752310 chrX 12752370 12752398 18 88 5.5 5.0 5.2 2.9 116 chrX 12752282 5` UTR CR44619 + chrX 12752340 5` UTR CR44619 + chrX 12752398 5` UTR CR44619 + chrX_18_12750001 chrX_12750001 KN35_1-HE 3237 chrX 12785423 12785456 chrX 12785501 12785534 15 78 4.0 4.5 4.2 2.9 111 chrX 12785423 intergenic Pde9 -,CG32647 - chrX 12785478 intergenic Pde9 - chrX 12785534 intergenic Pde9 - chrX_15_12785001 chrX_12785001 KN35_1-HE 3238 chrX 12804619 12804654 chrX 12804701 12804736 22 82 6.0 0.0 3.0 5.5 117 chrX 12804619 intron Pde9 - chrX 12804678 intron Pde9 - chrX 12804736 intron Pde9 - chrX_22_12800001 chrX_12800001 KN35_1-HE 3239 chrX 12825754 12825788 chrX 12825831 12825865 15 77 6.0 2.5 4.2 2.9 111 chrX 12825754 intron Pde9 - chrX 12825810 intron Pde9 - chrX 12825865 intron Pde9 - chrX_15_12825001 chrX_12825001 KN35_1-HE 3240 chrX 12836464 12836497 chrX 12836559 12836592 18 94 1.0 4.5 2.8 4.7 128 chrX 12836464 intron Pde9 - chrX 12836528 intron Pde9 - chrX 12836592 intron Pde9 - chrX_18_12835001 chrX_12835001 KN35_1-HE 3241 chrX 12844285 12844312 chrX 12844375 12844402 16 90 3.5 3.5 3.5 3.6 117 chrX 12844285 intron Pde9 - chrX 12844344 intron Pde9 - chrX 12844402 intron Pde9 - chrX_16_12840001 chrX_12840001 KN35_1-HE 3242 chrX 12858263 12858272 chrX 12858346 12858355 5 83 6.5 12.0 9.2 0.5 92 chrX 12858263 intron Pde9 - chrX 12858309 intron Pde9 - chrX 12858355 intron Pde9 - chrX_5_12855001 chrX_12855001 KN35_1-HE 3243 chrX 12864024 12864051 chrX 12864101 12864128 10 77 4.0 2.5 3.2 2.4 104 chrX 12864024 intron Pde9 - chrX 12864076 intron Pde9 - chrX 12864128 intron Pde9 - chrX_10_12860001 chrX_12860001 KN35_1-HE 3244 chrX 12893919 12893946 chrX 12894005 12894032 7 86 1.0 2.0 1.5 2.8 113 chrX 12893919 intron Pde9 - chrX 12893976 intron Pde9 - chrX 12894032 intron Pde9 - chrX_7_12890001 chrX_12890001 KN35_1-HE 3245 chrX 12912630 12912659 chrX 12912728 12912757 10 98 3.5 1.0 2.2 3.1 127 chrX 12912630 5` UTR CR45625 + chrX 12912694 5` UTR CR45625 + chrX 12912757 5` UTR CR45625 + chrX_10_12910001 chrX_12910001 KN35_1-HE 3246 chrX 12930595 12930606 chrX 12937712 12937723 HMS-Beagle 4 7117 4.5 10.0 7.2 0.5 7128 chrX 12930595 intron fne + chrX 12934159 intron fne + chrX 12937723 intron fne + chrX_4_12930001 chrX_12930001 KN35_1-HE 3247 chrX 12949975 12949978 chrX 12950059 12950062 4 84 4.5 1.0 2.8 1.1 87 chrX 12949975 3` UTR fne + chrX 12950018 3` UTR fne + chrX 12950062 3` UTR fne + chrX_4_12950001 chrX_12950001 KN35_1-HE 3248 chrX 12953890 12953926 chrX 12954029 12954065 16 139 5.0 2.5 3.8 3.3 175 chrX 12953890 intron hec - chrX 12953978 intron hec - chrX 12954065 intron hec - chrX_16_12950001 chrX_12950001 KN35_1-HE 3249 chrX 13018519 13018530 chrX 13018604 13018615 8 85 5.5 2.5 4.0 1.6 96 chrX 13018519 intron rad + chrX 13018567 intron rad + chrX 13018615 intron rad + chrX_8_13015001 chrX_13015001 KN35_1-HE 3250 chrX 13035500 13035517 chrX 13035577 13035594 15 77 4.0 5.5 4.8 2.6 94 chrX 13035500 intron rad + chrX 13035547 intron rad + chrX 13035594 intron rad + chrX_15_13035001 chrX_13035001 KN35_1-HE 3251 chrX 13109340 13109370 chrX 13109432 13109461 5 92 1.5 3.5 2.5 1.4 121 chrX 13109340 intron CG43313 - chrX 13109400 intron CG43313 - chrX 13109461 intron CG43313 - chrX_5_13105001 chrX_13105001 KN35_1-HE 3252 chrX 13146595 13146631 chrX 13146684 13146720 17 89 4.5 2.0 3.2 4.0 125 chrX 13146595 intron CG32645 + chrX 13146658 intron CG32645 + chrX 13146720 intron CG32645 + chrX_17_13145001 chrX_13145001 KN35_1-HE 3253 chrX 13172349 13172381 chrX 13172426 13172458 21 77 4.5 3.5 4.0 4.2 109 chrX 13172349 exon CG34411 - chrX 13172404 intron CG34411 - chrX 13172458 intron CG34411 - chrX_21_13170001 chrX_13170001 KN35_1-HE 3254 chrX 13210050 13210063 chrX 13210151 13210164 8 101 1.0 6.0 3.5 1.8 114 chrX 13210050 intron sno - chrX 13210107 intron sno - chrX 13210164 intron sno - chrX_8_13210001 chrX_13210001 KN35_1-HE 3255 chrX 13224511 13224548 chrX 13224598 13224635 14 87 4.5 3.5 4.0 2.8 124 chrX 13224511 intron mew - chrX 13224573 intron mew - chrX 13224635 intron mew - chrX_14_13220001 chrX_13220001 KN35_1-HE 3256 chrX 13374839 13374869 chrX 13374920 13374950 12 81 3.5 0.0 1.8 4.3 111 chrX 13374839 intron CG1640 + chrX 13374894 intron CG1640 + chrX 13374950 intron CG1640 + chrX_12_13370001 chrX_13370001 KN35_1-HE 3257 chrX 13401481 13401521 chrX 13401834 13401874 jockey 8 353 3.0 1.5 2.2 2.5 393 chrX 13401481 intergenic CG1673 +,CG12725 - chrX 13401678 intergenic CG12725 -,CG1673 + chrX 13401874 3` UTR CG12725 - chrX_8_13400001 chrX_13400001 KN35_1-HE 3258 chrX 13429469 13429492 chrX 13430619 13430642 jockey 11 1150 0.0 3.5 1.8 3.9 1173 chrX 13429469 intergenic not near genes chrX 13430056 intergenic not near genes chrX 13430642 intergenic not near genes chrX_11_13430001 chrX_13430001 KN35_1-HE 3259 chrX 13442142 13442164 chrX 13442234 13442256 5 92 4.0 3.0 3.5 1.1 114 chrX 13442142 intergenic not near genes chrX 13442199 intergenic not near genes chrX 13442256 intergenic not near genes chrX_5_13440001 chrX_13440001 KN35_1-HE 3260 chrX 13443410 13443419 chrX 13443488 13443497 4 78 7.0 7.0 7.0 0.5 87 chrX 13443410 intergenic not near genes chrX 13443454 intergenic not near genes chrX 13443497 intergenic not near genes chrX_4_13440001 chrX_13440001 KN35_1-HE 3261 chrX 13463649 13463672 chrX 13469227 13469250 mdg3 10 5578 4.0 6.0 5.0 1.7 5601 chrX 13463649 intron Neto + chrX 13466450 intron Neto + chrX 13469250 intron Neto + chrX_10_13465001 chrX_13465001 KN35_1-HE 3262 chrX 13628440 13628468 chrX 13628525 13628553 9 85 4.5 2.0 3.2 2.1 113 chrX 13628440 intron NFAT + chrX 13628496 intron NFAT + chrX 13628553 intron NFAT + chrX_9_13625001 chrX_13625001 KN35_1-HE 3263 chrX 13653608 13653634 chrX 13653690 13653716 18 82 10.5 6.0 8.2 2.0 108 chrX 13653608 intron NFAT + chrX 13653662 intron NFAT + chrX 13653716 intron NFAT + chrX_18_13650001 chrX_13650001 KN35_1-HE 3264 chrX 13663704 13663740 chrX 13663825 13663861 13 121 2.0 1.0 1.5 5.2 157 chrX 13663704 intergenic NFAT + chrX 13663782 intergenic NFAT + chrX 13663861 intergenic NFAT + chrX_13_13660001 chrX_13660001 KN35_1-HE 3265 chrX 13698221 13698249 chrX 13698410 13698438 24 189 4.5 7.0 5.8 3.5 217 chrX 13698221 intron,intron CG9940 -,NnaD + chrX 13698330 intron,intron CG9940 -,NnaD + chrX 13698438 intron,intron CG9940 -,NnaD + chrX_24_13695001 chrX_13695001 KN35_1-HE 3266 chrX 13734099 13734112 chrX 13734196 13734209 8 96 6.5 16.0 11.2 0.7 110 chrX 13734099 intron g - chrX 13734154 intron g - chrX 13734209 intron g - chrX_8_13730001 chrX_13730001 KN35_1-HE 3267 chrX 13739026 13739061 chrX 13739107 13739143 20 82 4.0 7.5 5.8 2.9 117 chrX 13739026 intron,exon Grip91 -,CG11134 + chrX 13739084 intron,3` UTR Grip91 -,CG11134 + chrX 13739143 intron,3` UTR Grip91 -,CG11134 + chrX_20_13735001 chrX_13735001 KN35_1-HE 3268 chrX 13770357 13770371 chrX 13770434 13770448 6 77 7.0 7.5 7.2 0.7 91 chrX 13770357 intron rdgB + chrX 13770402 intron rdgB + chrX 13770448 intron rdgB + chrX_6_13770001 chrX_13770001 KN35_1-HE 3269 chrX 13875959 13875989 chrX 13876044 13876074 16 85 0.0 0.0 0.0 16.0 115 chrX 13875959 intron mamo - chrX 13876016 intron mamo - chrX 13876074 intron mamo - chrX_16_13875001 chrX_13875001 KN35_1-HE 3270 chrX 13895072 13895104 chrX 13895182 13895199 21 109 8.0 8.0 8.0 2.3 127 chrX 13895072 intron mamo - chrX 13895136 intron mamo - chrX 13895199 intron mamo - chrX_21_13895001 chrX_13895001 KN35_1-HE 3271 chrX 13898340 13898357 chrX 13898448 13898465 8 108 7.0 17.5 12.2 0.6 125 chrX 13898340 intron mamo - chrX 13898402 intron mamo - chrX 13898465 intron mamo - chrX_8_13895001 chrX_13895001 KN35_1-HE 3272 chrX 13908798 13908811 chrX 13908877 13908890 7 79 1.5 12.0 6.8 0.9 92 chrX 13908798 intron mamo - chrX 13908844 intron mamo - chrX 13908890 intron mamo - chrX_7_13905001 chrX_13905001 KN35_1-HE 3273 chrX 13915424 13915450 chrX 13915504 13915530 5 80 2.5 0.0 1.2 2.3 106 chrX 13915424 intron mamo - chrX 13915477 intron mamo - chrX 13915530 intron mamo - chrX_5_13915001 chrX_13915001 KN35_1-HE 3274 chrX 13932365 13932372 chrX 13932444 13932452 5 78 10.0 10.0 10.0 0.5 87 chrX 13932365 intron mamo - chrX 13932408 intron mamo - chrX 13932452 intron mamo - chrX_5_13930001 chrX_13930001 KN35_1-HE 3275 chrX 13937993 13938008 chrX 13941265 13941280 I-element 6 3272 0.0 8.0 4.0 1.2 3287 chrX 13937993 intron mamo - chrX 13939636 intron mamo - chrX 13941280 intron mamo - chrX_6_13935001 chrX_13935001 KN35_1-HE 3276 chrX 13941903 13941928 chrX 13942010 13942034 7 106 7.0 0.0 3.5 1.6 131 chrX 13941903 intron mamo - chrX 13941968 intron mamo - chrX 13942034 intron mamo - chrX_7_13940001 chrX_13940001 KN35_1-HE 3277 chrX 13979643 13979675 chrX 13979721 13979753 26 78 5.0 5.0 5.0 4.3 110 chrX 13979643 intron mamo - chrX 13979698 intron mamo - chrX 13979753 intron mamo - chrX_26_13975001 chrX_13975001 KN35_1-HE 3278 chrX 13982741 13982771 chrX 13982818 13982848 13 77 6.0 4.5 5.2 2.1 107 chrX 13982741 intron mamo - chrX 13982794 intron mamo - chrX 13982848 intron mamo - chrX_13_13980001 chrX_13980001 KN35_1-HE 3279 chrX 13991235 13991438 chrX 13991364 13991522 13 103 0.0 0.0 0.0 13.0 287 chrX 13991235 5` UTR CR44655 + chrX 13991378 5` UTR CR44655 + chrX 13991522 intergenic CR44655 + chrX_13_13990001 chrX_13990001 KN35_1-HE 3280 chrX 14070622 14070637 chrX 14070708 14070723 4 86 0.0 3.5 1.8 1.4 101 chrX 14070622 intergenic not near genes chrX 14070672 intergenic not near genes chrX 14070723 intergenic not near genes chrX_4_14070001 chrX_14070001 KN35_1-HE 3281 chrX 14105020 14105053 chrX 14114171 14114205 roo 16 9152 4.0 2.5 3.2 3.8 9185 chrX 14105020 intergenic not near genes chrX 14109612 intergenic not near genes chrX 14114205 5` UTR CR44657 + chrX_16_14105001 chrX_14105001 KN35_1-HE 3282 chrX 14127001 14127009 chrX 14127079 14127087 4 78 0.0 5.5 2.8 1.1 86 chrX 14127001 intergenic not near genes chrX 14127044 intergenic not near genes chrX 14127087 intergenic not near genes chrX_4_14125001 chrX_14125001 KN35_1-HE 3283 chrX 14157590 14157617 chrX 14163248 14163275 297 10 5658 6.5 3.0 4.8 1.7 5685 chrX 14157590 intergenic not near genes chrX 14160432 intergenic not near genes chrX 14163275 intergenic not near genes chrX_10_14160001 chrX_14160001 KN35_1-HE 3284 chrX 14188013 14188044 chrX 14188149 14188180 9 136 1.5 3.0 2.2 2.8 167 chrX 14188013 intergenic CG12481 + chrX 14188096 intergenic CG12481 + chrX 14188180 intergenic CG12481 + chrX_9_14185001 chrX_14185001 KN35_1-HE 3285 chrX 14330954 14330983 chrX 14331048 14331076 13 94 4.0 8.0 6.0 1.9 122 chrX 14330954 intron dpr8 + chrX 14331015 intron dpr8 + chrX 14331076 intron dpr8 + chrX_13_14330001 chrX_14330001 KN35_1-HE 3286 chrX 14366536 14366541 chrX 14366617 14366622 7 81 5.5 3.0 4.2 1.3 86 chrX 14366536 intron dpr8 + chrX 14366579 intron dpr8 + chrX 14366622 intron dpr8 + chrX_7_14365001 chrX_14365001 KN35_1-HE 3287 chrX 14405013 14405022 chrX 14405092 14405101 6 79 7.5 11.0 9.2 0.6 88 chrX 14405013 intron dpr8 + chrX 14405057 intron dpr8 + chrX 14405101 intron dpr8 + chrX_6_14405001 chrX_14405001 KN35_1-HE 3288 chrX 14416305 14416339 chrX 14421074 14421107 F-element 10 4769 5.0 9.5 7.2 1.2 4802 chrX 14416305 intron dpr8 + chrX 14418706 intron dpr8 + chrX 14421107 intron dpr8 + chrX_10_14415001 chrX_14415001 KN35_1-HE 3289 chrX 14444553 14444581 chrX 14444630 14444664 9 78 0.0 0.0 0.0 9.0 111 chrX 14444553 intron dpr8 + chrX 14444608 intron dpr8 + chrX 14444664 intron dpr8 + chrX_9_14440001 chrX_14440001 KN35_1-HE 3290 chrX 14539208 14539224 chrX 14539294 14539310 9 86 8.5 4.0 6.2 1.2 102 chrX 14539208 intergenic not near genes chrX 14539259 intergenic not near genes chrX 14539310 intergenic not near genes chrX_9_14535001 chrX_14535001 KN35_1-HE 3291 chrX 14542829 14542863 chrX 14542921 14542955 15 92 5.5 10.0 7.8 1.7 126 chrX 14542829 intergenic not near genes chrX 14542892 intergenic not near genes chrX 14542955 intergenic not near genes chrX_15_14540001 chrX_14540001 KN35_1-HE 3292 chrX 14566439 14566452 chrX 14566734 14566747 9 295 1.5 9.0 5.2 1.5 308 chrX 14566439 intergenic not near genes chrX 14566593 intergenic not near genes chrX 14566747 intergenic not near genes chrX_9_14565001 chrX_14565001 KN35_1-HE 3293 chrX 14589685 14589708 chrX 14589927 14589950 pogo 17 242 4.0 0.5 2.2 5.3 265 chrX 14589685 intron CG9413 - chrX 14589818 intron CG9413 - chrX 14589950 intron CG9413 - chrX_17_14585001 chrX_14585001 KN35_1-HE 3294 chrX 14597733 14597750 chrX 14597811 14597828 7 78 8.5 6.5 7.5 0.8 95 chrX 14597733 intron CG9413 - chrX 14597780 intron CG9413 - chrX 14597828 intron CG9413 - chrX_7_14595001 chrX_14595001 KN35_1-HE 3295 chrX 14636460 14636491 chrX 14641902 14641933 I-element 15 5442 10.0 6.0 8.0 1.7 5473 chrX 14636460 intron NetA - chrX 14639196 intron NetA - chrX 14641933 intron NetA - chrX_15_14635001 chrX_14635001 KN35_1-HE 3296 chrX 14658294 14658311 chrX 14658392 14658409 5 98 1.0 3.5 2.2 1.6 115 chrX 14658294 intergenic not near genes chrX 14658352 intergenic not near genes chrX 14658409 intergenic not near genes chrX_5_14655001 chrX_14655001 KN35_1-HE 3297 chrX 14714048 14714065 chrX 14714131 14714148 10 83 7.0 7.0 7.0 1.2 100 chrX 14714048 intron NetB - chrX 14714098 intron NetB - chrX 14714148 intron NetB - chrX_10_14710001 chrX_14710001 KN35_1-HE 3298 chrX 14778026 14778061 chrX 14782824 14782859 Doc 16 4798 4.5 5.5 5.0 2.7 4833 chrX 14778026 intergenic CG5347 + chrX 14780442 intergenic not near genes chrX 14782859 intergenic Ag5r2 - chrX_16_14780001 chrX_14780001 KN35_1-HE 3299 chrX 14799706 14799741 chrX 14799791 14799826 16 85 4.5 8.0 6.2 2.2 120 chrX 14799706 intron rut - chrX 14799766 intron rut - chrX 14799826 intron rut - chrX_16_14795001 chrX_14795001 KN35_1-HE 3300 chrX 14814885 14814892 chrX 14814966 14814973 4 81 5.5 0.5 3.0 1.0 88 chrX 14814885 intron rut - chrX 14814929 intron rut - chrX 14814973 intron rut - chrX_4_14810001 chrX_14810001 KN35_1-HE 3301 chrX 14814894 14814902 chrX 14814962 14814982 6 76 4.0 0.5 2.2 1.9 88 chrX 14814894 intron rut - chrX 14814938 intron rut - chrX 14814982 intron rut - chrX_6_14810001 chrX_14810001 KN35_1-HE 3302 chrX 14818769 14818797 chrX 14823974 14824002 copia 9 5205 4.5 7.0 5.8 1.3 5233 chrX 14818769 intron rut - chrX 14821386 intron rut - chrX 14824002 intron rut - chrX_9_14820001 chrX_14820001 KN35_1-HE 3303 chrX 14849750 14849766 chrX 14849858 14849874 6 107 3.0 4.0 3.5 1.3 124 chrX 14849750 intron Flo2 + chrX 14849812 intron Flo2 + chrX 14849874 intron Flo2 + chrX_6_14845001 chrX_14845001 KN35_1-HE 3304 chrX 14931649 14931678 chrX 14931737 14931766 20 88 0.0 7.0 3.5 4.4 117 chrX 14931649 intron Flo2 + chrX 14931708 intron Flo2 + chrX 14931766 intron Flo2 + chrX_20_14930001 chrX_14930001 KN35_1-HE 3305 chrX 14963687 14963718 chrX 14963766 14963797 17 79 2.0 3.0 2.5 4.9 110 chrX 14963687 intron eag + chrX 14963742 intron eag + chrX 14963797 intron eag + chrX_17_14960001 chrX_14960001 KN35_1-HE 3306 chrX 14968083 14968100 chrX 14968163 14968180 14 80 0.0 8.0 4.0 2.8 97 chrX 14968083 intron eag + chrX 14968132 intron eag + chrX 14968180 intron eag + chrX_14_14965001 chrX_14965001 KN35_1-HE 3307 chrX 14970665 14970694 chrX 14970744 14970773 14 79 1.5 4.5 3.0 3.5 108 chrX 14970665 intron eag + chrX 14970719 intron eag + chrX 14970773 intron eag + chrX_14_14970001 chrX_14970001 KN35_1-HE 3308 chrX 14976423 14976443 chrX 14976513 14976537 6 89 4.0 4.5 4.2 1.2 114 chrX 14976423 intron eag + chrX 14976480 intron eag + chrX 14976537 intron eag + chrX_6_14975001 chrX_14975001 KN35_1-HE 3309 chrX 14981705 14981740 chrX 14981785 14981820 48 80 6.5 0.0 3.2 11.4 115 chrX 14981705 intron eag + chrX 14981762 intron eag + chrX 14981820 intron eag + chrX_48_14980001 chrX_14980001 KN35_1-HE 3310 chrX 15082169 15082187 chrX 15082406 15082421 7 234 40.5 32.0 36.2 0.2 252 chrX 15082169 exon CG33177 + chrX 15082295 3` UTR CG33177 + chrX 15082421 intergenic CG33177 +,CR44960 -,CG33178 + chrX_7_15080001 chrX_15080001 KN35_1-HE 3311 chrX 15123764 15123768 chrX 15123845 15123849 5 81 3.5 3.5 3.5 1.1 85 chrX 15123764 intergenic not near genes chrX 15123806 intergenic not near genes chrX 15123849 intergenic not near genes chrX_5_15120001 chrX_15120001 KN35_1-HE 3312 chrX 15125191 15125205 chrX 15125290 15125304 6 99 1.0 9.5 5.2 1.0 113 chrX 15125191 intergenic not near genes chrX 15125248 intergenic not near genes chrX 15125304 intergenic drd + chrX_6_15125001 chrX_15125001 KN35_1-HE 3313 chrX 15191726 15191758 chrX 15191804 15191836 15 78 4.5 3.5 4.0 3.0 110 chrX 15191726 intergenic not near genes chrX 15191781 intergenic not near genes chrX 15191836 intergenic not near genes chrX_15_15190001 chrX_15190001 KN35_1-HE 3314 chrX 15210220 15210230 chrX 15210303 15210313 4 83 3.0 1.5 2.2 1.2 93 chrX 15210220 intergenic CG5662 + chrX 15210266 intergenic CG5662 + chrX 15210313 intergenic CG5662 + chrX_4_15210001 chrX_15210001 KN35_1-HE 3315 chrX 15247269 15247293 chrX 15247355 15247378 16 86 1.0 2.0 1.5 6.4 109 chrX 15247269 intergenic not near genes chrX 15247324 intergenic not near genes chrX 15247378 intergenic not near genes chrX_16_15245001 chrX_15245001 KN35_1-HE 3316 chrX 15273701 15273738 chrX 15274869 15274906 1360 8 1168 5.0 3.5 4.2 1.5 1205 chrX 15273701 intergenic not near genes chrX 15274304 intergenic not near genes chrX 15274906 intergenic not near genes chrX_8_15270001 chrX_15270001 KN35_1-HE 3317 chrX 15340769 15340776 chrX 15340847 15340852 4 78 13.0 11.0 12.0 0.3 83 chrX 15340769 exon CG9123 - chrX 15340810 exon CG9123 - chrX 15340852 exon CG9123 - chrX_4_15340001 chrX_15340001 KN35_1-HE 3318 chrX 15413049 15413087 chrX 15417352 15417390 Juan 22 4303 7.5 2.0 4.8 3.8 4341 chrX 15413049 intron Cngl - chrX 15415220 intron Cngl - chrX 15417390 intron Cngl - chrX_22_15415001 chrX_15415001 KN35_1-HE 3319 chrX 15421939 15421949 chrX 15423451 15423461 pogo 6 1512 3.0 9.5 6.2 0.8 1522 chrX 15421939 intron Cngl - chrX 15422700 intron Cngl - chrX 15423461 intron Cngl - chrX_6_15420001 chrX_15420001 KN35_1-HE 3320 chrX 15426151 15426186 chrX 15426234 15426269 19 83 7.5 4.5 6.0 2.7 118 chrX 15426151 intron Cngl - chrX 15426210 intron Cngl - chrX 15426269 intron Cngl - chrX_19_15425001 chrX_15425001 KN35_1-HE 3321 chrX 15435687 15435704 chrX 15436121 15436138 rover 13 434 11.5 9.5 10.5 1.1 451 chrX 15435687 intron Cngl - chrX 15435912 intron Cngl - chrX 15436138 intron Cngl - chrX_13_15435001 chrX_15435001 KN35_1-HE 3322 chrX 15442298 15442327 chrX 15442379 15442408 6 81 5.0 2.5 3.8 1.2 110 chrX 15442298 intergenic not near genes chrX 15442353 intergenic not near genes chrX 15442408 intergenic not near genes chrX_6_15440001 chrX_15440001 KN35_1-HE 3323 chrX 15483642 15483669 chrX 15483719 15483746 16 77 4.0 6.0 5.0 2.7 104 chrX 15483642 intron CG6340 + chrX 15483694 intron CG6340 + chrX 15483746 intron CG6340 + chrX_16_15480001 chrX_15480001 KN35_1-HE 3324 chrX 15519805 15519824 chrX 15519884 15519903 8 79 3.5 4.5 4.0 1.6 98 chrX 15519805 intron Ac13E - chrX 15519854 intron Ac13E - chrX 15519903 intron Ac13E - chrX_8_15515001 chrX_15515001 KN35_1-HE 3325 chrX 15542500 15542520 chrX 15542580 15542600 15 80 0.0 9.5 4.8 2.6 100 chrX 15542500 intron Ac13E - chrX 15542550 intron Ac13E - chrX 15542600 intron Ac13E - chrX_15_15540001 chrX_15540001 KN35_1-HE 3326 chrX 15549174 15549195 chrX 15549275 15549296 16 101 5.0 5.5 5.2 2.6 122 chrX 15549174 intron Ac13E - chrX 15549235 intron Ac13E - chrX 15549296 intron Ac13E - chrX_16_15545001 chrX_15545001 KN35_1-HE 3327 chrX 15614291 15614310 chrX 15614371 15614398 9 87 7.5 5.5 6.5 1.2 107 chrX 15614291 intron sog - chrX 15614344 intron sog - chrX 15614398 intron sog - chrX_9_15610001 chrX_15610001 KN35_1-HE 3328 chrX 15647574 15647605 chrX 15647657 15647688 9 83 4.5 0.5 2.5 2.6 114 chrX 15647574 intergenic not near genes chrX 15647631 intergenic not near genes chrX 15647688 intergenic not near genes chrX_9_15645001 chrX_15645001 KN35_1-HE 3329 chrX 13023121 13023124 chrX 15696056 15696059 4 2672935 0.0 9.0 4.5 0.7 2672938 chrX 13023121 intron rad + chrX 14359590 intron dpr8 + chrX 15696059 intergenic not near genes chrX_4_14355001 chrX_14355001 KN35_1-HE 3330 chrX 15696793 15697039 chrX 15840011 15840261 8 143220 4.0 17.0 10.5 0.7 143468 chrX 15696793 intergenic not near genes chrX 15768527 exon CG17209 + chrX 15840261 intron CG8565 + chrX_8_15765001 chrX_15765001 KN35_1-HE 3331 chrX 15809018 15809044 chrX 15809109 15809135 9 91 0.0 5.0 2.5 2.6 117 chrX 15809018 intron sd + chrX 15809076 intron sd + chrX 15809135 intron sd + chrX_9_15805001 chrX_15805001 KN35_1-HE 3332 chrX 15818772 15818809 chrX 15818849 15818886 25 77 4.5 6.0 5.2 4.0 114 chrX 15818772 intron sd + chrX 15818829 intron sd + chrX 15818886 intron sd + chrX_25_15815001 chrX_15815001 KN35_1-HE 3333 chrX 15826493 15826496 chrX 18009199 18009202 4 2182706 14.5 7.5 11.0 0.3 2182709 chrX 15826493 intergenic not near genes chrX 16917848 intron CG4928 + chrX 18009202 intron Sh - chrX_4_16915001 chrX_16915001 KN35_1-HE 3334 chrX 15898440 15898458 chrX 15898595 15898613 8 155 9.5 5.5 7.5 0.9 173 chrX 15898440 intron shi + chrX 15898526 intron shi + chrX 15898613 intron shi + chrX_8_15895001 chrX_15895001 KN35_1-HE 3335 chrX 15989687 15989721 chrX 15989798 15989832 8 111 1.0 3.5 2.2 2.5 145 chrX 15989687 intron eIF5 - chrX 15989760 intron eIF5 - chrX 15989832 intron eIF5 - chrX_8_15985001 chrX_15985001 KN35_1-HE 3336 chrX 16082983 16082994 chrX 16083073 16083084 5 90 4.0 4.5 4.2 1.0 101 chrX 16082983 intron Tob - chrX 16083034 intron Tob - chrX 16083084 intron Tob - chrX_5_16080001 chrX_16080001 KN35_1-HE 3337 chrX 16136623 16136625 chrX 19541388 19541390 4 3404765 2.0 11.0 6.5 0.5 3404767 chrX 16136623 intron disco-r - chrX 17839006 intron CG6398 + chrX 19541390 intron CG32532 - chrX_4_17835001 chrX_17835001 KN35_1-HE 3338 chrX 16222780 16222805 chrX 16231131 16231156 roo 15 8351 3.0 5.0 4.0 3.0 8376 chrX 16222780 intergenic not near genes chrX 16226968 intergenic not near genes chrX 16231156 intergenic not near genes chrX_15_16225001 chrX_16225001 KN35_1-HE 3339 chrX 16236709 16236724 chrX 16236800 16236815 10 91 11.5 0.0 5.8 1.5 106 chrX 16236709 intergenic not near genes chrX 16236762 intergenic not near genes chrX 16236815 intergenic not near genes chrX_10_16235001 chrX_16235001 KN35_1-HE 3340 chrX 14317413 14317416 chrX 16262249 16262252 4 1944836 12.0 0.0 6.0 0.6 1944839 chrX 14317413 intergenic betaNACtes6 - chrX 15289832 intergenic CR44663 +,CR44664 + chrX 16262252 intergenic not near genes chrX_4_15285001 chrX_15285001 KN35_1-HE 3341 chrX 16329437 16329448 chrX 16329517 16329532 4 83 0.0 4.5 2.2 1.2 95 chrX 16329437 intron CG9919 - chrX 16329484 intron CG9919 - chrX 16329532 exon CG9919 - chrX_4_16325001 chrX_16325001 KN35_1-HE 3342 chrX 16340689 16340701 chrX 16349847 16349859 roo 7 9158 3.5 4.0 3.8 1.5 9170 chrX 16340689 intergenic Dsp1 + chrX 16345274 intergenic not near genes chrX 16349859 intergenic sl + chrX_7_16345001 chrX_16345001 KN35_1-HE 3343 chrX 16362940 16362972 chrX 16363032 16363064 11 90 1.0 5.5 3.2 2.6 124 chrX 16362940 intron nonA + chrX 16363002 intron nonA + chrX 16363064 intron nonA + chrX_11_16360001 chrX_16360001 KN35_1-HE 3344 chrX 16365063 16365091 chrX 16365146 16365174 9 83 0.0 4.5 2.2 2.8 111 chrX 16365063 intron nonA + chrX 16365118 intron nonA + chrX 16365174 intron nonA + chrX_9_16365001 chrX_16365001 KN35_1-HE 3345 chrX 16409353 16409363 chrX 16409436 16409446 5 83 3.0 8.0 5.5 0.8 93 chrX 16409353 intron CG4301 + chrX 16409400 intron CG4301 + chrX 16409446 intron CG4301 + chrX_5_16405001 chrX_16405001 KN35_1-HE 3346 chrX 16437604 16437632 chrX 16437692 16437720 10 88 3.5 3.5 3.5 2.2 116 chrX 16437604 3` UTR,3` UTR hang +,CG9947 - chrX 16437662 3` UTR,3` UTR hang +,CG9947 - chrX 16437720 3` UTR,3` UTR hang +,CG9947 - chrX_10_16435001 chrX_16435001 KN35_1-HE 3347 chrX 16492643 16492678 chrX 16498221 16498256 mdg3 25 5578 7.5 5.5 6.5 3.3 5613 chrX 16492643 intron para - chrX 16495450 intron para - chrX 16498256 intron para - chrX_25_16495001 chrX_16495001 KN35_1-HE 3348 chrX 16529425 16529436 chrX 16529537 16529548 7 112 0.0 19.0 9.5 0.7 123 chrX 16529425 intron para - chrX 16529486 intron para - chrX 16529548 intron para - chrX_7_16525001 chrX_16525001 KN35_1-HE 3349 chrX 16529440 16529444 chrX 16529531 16529548 6 107 0.0 17.5 8.8 0.6 108 chrX 16529440 intron para - chrX 16529494 intron para - chrX 16529548 intron para - chrX_6_16525001 chrX_16525001 KN35_1-HE 3350 chrX 16570871 16570905 chrX 16570950 16570986 11 81 4.0 4.5 4.2 2.1 115 chrX 16570871 intron CanA-14F - chrX 16570928 intron CanA-14F - chrX 16570986 intron CanA-14F - chrX_11_16570001 chrX_16570001 KN35_1-HE 3351 chrX 16574817 16574850 chrX 16575257 16575290 16 440 3.5 4.5 4.0 3.2 473 chrX 16574817 intron CanA-14F - chrX 16575054 intron CanA-14F - chrX 16575290 intron CanA-14F - chrX_16_16575001 chrX_16575001 KN35_1-HE 3352 chrX 16681632 16681662 chrX 16681709 16681739 14 77 5.0 2.5 3.8 2.9 107 chrX 16681632 3` UTR,intron sing +,Axs - chrX 16681686 3` UTR,intron sing +,Axs - chrX 16681739 3` UTR,intron sing +,Axs - chrX_14_16680001 chrX_16680001 KN35_1-HE 3353 chrX 16689623 16689641 chrX 16689710 16689715 12 85 4.5 1.5 3.0 3.0 92 chrX 16689623 intron Sep4 - chrX 16689669 intron Sep4 - chrX 16689715 intron Sep4 - chrX_12_16685001 chrX_16685001 KN35_1-HE 3354 chrX 16690454 16690478 chrX 16690534 16690558 6 80 2.0 4.5 3.2 1.4 104 chrX 16690454 intron Sep4 - chrX 16690506 intron Sep4 - chrX 16690558 intron Sep4 - chrX_6_16690001 chrX_16690001 KN35_1-HE 3355 chrX 16785273 16785298 chrX 16785378 16785403 14 105 6.0 7.0 6.5 1.9 130 chrX 16785273 3` UTR CG9609 - chrX 16785338 3` UTR CG9609 - chrX 16785403 3` UTR CG9609 - chrX_14_16785001 chrX_16785001 KN35_1-HE 3356 chrX 16806458 16806475 chrX 16806558 16806575 15 100 12.0 6.5 9.2 1.5 117 chrX 16806458 3` UTR,exon CR44053 -,ppk28 + chrX 16806516 3` UTR,intron CR44053 -,ppk28 + chrX 16806575 intron,intron CR44053 -,ppk28 + chrX_15_16805001 chrX_16805001 KN35_1-HE 3357 chrX 16809170 16809254 chrX 16812080 16812133 4 2894 0.0 5.0 2.5 1.1 2963 chrX 16809170 3` UTR CR44053 - chrX 16810652 intergenic not near genes chrX 16812133 intron CG4829 + chrX_4_16810001 chrX_16810001 KN35_1-HE 3358 chrX 16815365 16815378 chrX 16815442 16815455 8 77 9.5 0.0 4.8 1.4 90 chrX 16815365 intron CG4829 + chrX 16815410 intron CG4829 + chrX 16815455 intron CG4829 + chrX_8_16815001 chrX_16815001 KN35_1-HE 3359 chrX 16819153 16819157 chrX 16819425 16819429 7 272 8.5 3.0 5.8 1.0 276 chrX 16819153 intron CG4829 + chrX 16819291 intron CG4829 + chrX 16819429 intron CG4829 + chrX_7_16815001 chrX_16815001 KN35_1-HE 3360 chrX 16862692 16862724 chrX 16862769 16862801 10 76 2.0 4.0 3.0 2.5 109 chrX 16862692 intron CG13003 - chrX 16862746 intron CG13003 - chrX 16862801 intron CG13003 - chrX_10_16860001 chrX_16860001 KN35_1-HE 3361 chrX 16936005 16936034 chrX 16936424 16936453 jockey 8 419 1.0 6.0 3.5 1.8 448 chrX 16936005 intron CG4928 + chrX 16936229 intron CG4928 + chrX 16936453 intron CG4928 + chrX_8_16935001 chrX_16935001 KN35_1-HE 3362 chrX 17011963 17011999 chrX 17012047 17012083 17 83 3.5 3.0 3.2 4.0 120 chrX 17011963 intron CG45002 - chrX 17012023 intron CG45002 - chrX 17012083 intron CG45002 - chrX_17_17010001 chrX_17010001 KN35_1-HE 3363 chrX 17041035 17041046 chrX 17041122 17041133 5 87 1.0 0.0 0.5 3.3 98 chrX 17041035 intron CG45002 - chrX 17041084 intron CG45002 - chrX 17041133 intron CG45002 - chrX_5_17040001 chrX_17040001 KN35_1-HE 3364 chrX 17057939 17057966 chrX 17058181 17058208 pogo 7 242 0.5 3.5 2.0 2.3 269 chrX 17057939 intron CG45002 - chrX 17058074 intron CG45002 - chrX 17058208 intron CG45002 - chrX_7_17055001 chrX_17055001 KN35_1-HE 3365 chrX 17100552 17100572 chrX 17100692 17100712 18 140 6.5 9.0 7.8 2.0 160 chrX 17100552 intron CG4991 + chrX 17100632 intron CG4991 + chrX 17100712 intron CG4991 + chrX_18_17100001 chrX_17100001 KN35_1-HE 3366 chrX 17110302 17110337 chrX 17110425 17110460 10 123 0.0 2.0 1.0 5.0 158 chrX 17110302 intron CG5004 + chrX 17110381 intron CG5004 + chrX 17110460 intron CG5004 + chrX_10_17110001 chrX_17110001 KN35_1-HE 3367 chrX 17205847 17205858 chrX 17205938 17205949 7 91 4.0 8.5 6.2 1.0 102 chrX 17205847 intergenic not near genes chrX 17205898 intergenic not near genes chrX 17205949 intergenic CG32564 + chrX_7_17205001 chrX_17205001 KN35_1-HE 3368 chrX 17221826 17221860 chrX 17221913 17221947 13 87 3.5 7.0 5.2 2.1 121 chrX 17221826 intron CG5172 + chrX 17221886 intron CG5172 + chrX 17221947 intron CG5172 + chrX_13_17220001 chrX_17220001 KN35_1-HE 3369 chrX 17229961 17229966 chrX 17230065 17230070 8 104 0.0 3.0 1.5 3.2 109 chrX 17229961 intergenic CG10597 - chrX 17230016 intergenic CG10597 - chrX 17230070 intergenic CG10597 - chrX_8_17230001 chrX_17230001 KN35_1-HE 3370 chrX 17282882 17282905 chrX 17282961 17282984 14 79 3.0 0.0 1.5 5.6 102 chrX 17282882 intron CG5445 + chrX 17282933 5` UTR CG5445 + chrX 17282984 intron CG5445 + chrX_14_17280001 chrX_17280001 KN35_1-HE 3371 chrX 17290063 17290097 chrX 17290140 17290174 11 77 2.5 4.5 3.5 2.4 111 chrX 17290063 intron,intron CG5445 +,Fim - chrX 17290118 intron,intron CG5445 +,Fim - chrX 17290174 intron,intron CG5445 +,Fim - chrX_11_17290001 chrX_17290001 KN35_1-HE 3372 chrX 17316374 17316398 chrX 17316459 17316483 11 85 5.0 0.0 2.5 3.1 109 chrX 17316374 intron B-H2 + chrX 17316428 intron B-H2 + chrX 17316483 intron B-H2 + chrX_11_17315001 chrX_17315001 KN35_1-HE 3373 chrX 17344628 17344652 chrX 17344746 17344775 18 123 4.0 3.0 3.5 4.0 147 chrX 17344628 intergenic not near genes chrX 17344702 intergenic not near genes chrX 17344775 intergenic not near genes chrX_18_17340001 chrX_17340001 KN35_1-HE 3374 chrX 17389638 17389662 chrX 17389728 17389752 9 90 4.5 4.5 4.5 1.6 114 chrX 17389638 intergenic not near genes chrX 17389695 intergenic not near genes chrX 17389752 intergenic not near genes chrX_9_17385001 chrX_17385001 KN35_1-HE 3375 chrX 17393259 17393295 chrX 17393338 17393374 18 79 3.5 5.0 4.2 3.5 115 chrX 17393259 intergenic not near genes chrX 17393316 intergenic not near genes chrX 17393374 intergenic not near genes chrX_18_17390001 chrX_17390001 KN35_1-HE 3376 chrX 17401326 17401330 chrX 17401406 17401410 5 80 0.0 9.5 4.8 0.9 84 chrX 17401326 intron B-H1 + chrX 17401368 intron B-H1 + chrX 17401410 intron B-H1 + chrX_5_17400001 chrX_17400001 KN35_1-HE 3377 chrX 17405442 17405475 chrX 17405531 17405564 21 89 0.0 2.5 1.2 9.5 122 chrX 17405442 intergenic not near genes chrX 17405503 intergenic not near genes chrX 17405564 intergenic not near genes chrX_21_17405001 chrX_17405001 KN35_1-HE 3378 chrX 17429158 17429191 chrX 17429256 17429289 14 98 5.0 0.0 2.5 4.0 131 chrX 17429158 intron CG12994 - chrX 17429224 intron CG12994 - chrX 17429289 intron CG12994 - chrX_14_17425001 chrX_17425001 KN35_1-HE 3379 chrX 17434427 17434446 chrX 17434521 17434540 5 94 3.0 2.5 2.8 1.3 113 chrX 17434427 intron CG12994 - chrX 17434484 intron CG12994 - chrX 17434540 intron CG12994 - chrX_5_17430001 chrX_17430001 KN35_1-HE 3380 chrX 17443489 17443522 chrX 17443578 17443611 8 89 0.0 4.5 2.2 2.5 122 chrX 17443489 intron CG12994 - chrX 17443550 intron CG12994 - chrX 17443611 intron CG12994 - chrX_8_17440001 chrX_17440001 KN35_1-HE 3381 chrX 17502351 17502366 chrX 17502432 17502447 10 81 5.5 5.5 5.5 1.5 96 chrX 17502351 intron CG43658 - chrX 17502399 intron CG43658 - chrX 17502447 intron CG43658 - chrX_10_17500001 chrX_17500001 KN35_1-HE 3382 chrX 17536348 17536374 chrX 17536428 17536454 12 80 4.0 13.0 8.5 1.3 106 chrX 17536348 intron CG43658 - chrX 17536401 intron CG43658 - chrX 17536454 intron CG43658 - chrX_12_17535001 chrX_17535001 KN35_1-HE 3383 chrX 17545808 17545819 chrX 17545892 17545903 9 84 0.0 9.0 4.5 1.6 95 chrX 17545808 intron CG43658 - chrX 17545856 intron CG43658 - chrX 17545903 intron CG43658 - chrX_9_17545001 chrX_17545001 KN35_1-HE 3384 chrX 17556951 17556958 chrX 17557451 17557458 mdg1 5 500 8.0 11.5 9.8 0.5 507 chrX 17556951 intron CG43658 - chrX 17557204 intron CG43658 - chrX 17557458 intron CG43658 - chrX_5_17555001 chrX_17555001 KN35_1-HE 3385 chrX 17568040 17568068 chrX 17568153 17568181 20 113 5.5 5.0 5.2 3.2 141 chrX 17568040 exon ppk23 - chrX 17568110 intron ppk23 - chrX 17568181 exon ppk23 - chrX_20_17565001 chrX_17565001 KN35_1-HE 3386 chrX 17617112 17617131 chrX 17617207 17617226 10 95 2.0 2.5 2.2 3.1 114 chrX 17617112 intergenic not near genes chrX 17617169 intergenic not near genes chrX 17617226 intergenic not near genes chrX_10_17615001 chrX_17615001 KN35_1-HE 3387 chrX 17655452 17655486 chrX 17655531 17655565 17 79 4.0 1.5 2.8 4.5 113 chrX 17655452 exon IntS2 - chrX 17655508 intron IntS2 - chrX 17655565 intron IntS2 - chrX_17_17655001 chrX_17655001 KN35_1-HE 3388 chrX 17741369 17741396 chrX 17741454 17741481 15 85 3.0 3.0 3.0 3.8 112 chrX 17741369 intron CG42684 + chrX 17741425 intron CG42684 + chrX 17741481 intron CG42684 + chrX_15_17740001 chrX_17740001 KN35_1-HE 3389 chrX 17788281 17788318 chrX 17788360 17788397 23 79 3.5 3.5 3.5 5.1 116 chrX 17788281 intergenic not near genes chrX 17788339 intergenic not near genes chrX 17788397 intergenic not near genes chrX_23_17785001 chrX_17785001 KN35_1-HE 3390 chrX 17792949 17792979 chrX 17796248 17796278 flea 17 3299 7.5 6.0 6.8 2.2 3329 chrX 17792949 intron OdsH + chrX 17794614 intron OdsH + chrX 17796278 intron OdsH + chrX_17_17790001 chrX_17790001 KN35_1-HE 3391 chrX 17851755 17851761 chrX 17851837 17851843 5 82 1.0 7.0 4.0 1.0 88 chrX 17851755 3` UTR CG6506 + chrX 17851799 3` UTR CG6506 + chrX 17851843 3` UTR CG6506 + chrX_5_17850001 chrX_17850001 KN35_1-HE 3392 chrX 17965709 17965740 chrX 17965787 17965818 20 78 5.0 2.0 3.5 4.4 109 chrX 17965709 intron Sh - chrX 17965764 intron Sh - chrX 17965818 intron Sh - chrX_20_17965001 chrX_17965001 KN35_1-HE 3393 chrX 17985870 17985886 chrX 17985948 17985964 9 78 0.0 13.5 6.8 1.2 94 chrX 17985870 intron Sh - chrX 17985917 intron Sh - chrX 17985964 intron Sh - chrX_9_17985001 chrX_17985001 KN35_1-HE 3394 chrX 18005558 18005593 chrX 18005638 18005673 24 80 3.5 4.5 4.0 4.8 115 chrX 18005558 intron Sh - chrX 18005616 intron Sh - chrX 18005673 intron Sh - chrX_24_18005001 chrX_18005001 KN35_1-HE 3395 chrX 18039630 18039663 chrX 18040345 18040378 30 715 56.0 55.5 55.8 0.5 748 chrX 18039630 5` UTR Sh - chrX 18040004 5` UTR Sh - chrX 18040378 5` UTR Sh - chrX_30_18040001 chrX_18040001 KN35_1-HE 3396 chrX 18093445 18093478 chrX 18093526 18093559 13 81 1.5 2.5 2.0 4.3 114 chrX 18093445 5` UTR RhoGAP16F + chrX 18093502 intron RhoGAP16F + chrX 18093559 5` UTR RhoGAP16F + chrX_13_18090001 chrX_18090001 KN35_1-HE 3397 chrX 18126007 18126038 chrX 18126100 18126131 18 92 2.5 4.0 3.2 4.3 124 chrX 18126007 intron CG32553 - chrX 18126069 intron CG32553 - chrX 18126131 intron CG32553 - chrX_18_18125001 chrX_18125001 KN35_1-HE 3398 chrX 18161511 18161522 chrX 18161702 18161713 5 191 5.0 4.0 4.5 0.9 202 chrX 18161511 intron Frq1 + chrX 18161612 intron Frq1 + chrX 18161713 intron Frq1 + chrX_5_18160001 chrX_18160001 KN35_1-HE 3399 chrX 18178434 18178451 chrX 18178514 18178531 8 80 4.0 4.0 4.0 1.6 97 chrX 18178434 intron Frq2 + chrX 18178482 intron Frq2 + chrX 18178531 intron,3` UTR Frq2 +,Andorra - chrX_8_18175001 chrX_18175001 KN35_1-HE 3400 chrX 18194064 18194103 chrX 18194600 18194639 BS 21 536 5.5 9.0 7.2 2.6 575 chrX 18194064 intron Frq2 + chrX 18194352 intron Frq2 + chrX 18194639 intron Frq2 + chrX_21_18190001 chrX_18190001 KN35_1-HE 3401 chrX 18206518 18206552 chrX 18206595 18206629 14 77 2.0 1.5 1.8 5.0 111 chrX 18206518 intergenic not near genes chrX 18206574 intergenic not near genes chrX 18206629 intergenic not near genes chrX_14_18205001 chrX_18205001 KN35_1-HE 3402 chrX 18283040 18283049 chrX 18283160 18283169 4 120 9.0 0.0 4.5 0.7 129 chrX 18283040 intron upd3 + chrX 18283104 intron upd3 + chrX 18283169 intron upd3 + chrX_4_18280001 chrX_18280001 KN35_1-HE 3403 chrX 18291056 18291091 chrX 18291136 18291164 18 75 10.0 11.0 10.5 1.6 108 chrX 18291056 intergenic not near genes chrX 18291110 intergenic not near genes chrX 18291164 intergenic not near genes chrX_18_18290001 chrX_18290001 KN35_1-HE 3404 chrX 18297552 18297570 chrX 18297632 18297650 15 80 2.0 4.0 3.0 3.8 98 chrX 18297552 intergenic not near genes chrX 18297601 intergenic not near genes chrX 18297650 intergenic not near genes chrX_15_18295001 chrX_18295001 KN35_1-HE 3405 chrX 18320489 18320501 chrX 18320622 18320634 6 133 0.0 4.5 2.2 1.9 145 chrX 18320489 intron CG6023 - chrX 18320562 intron CG6023 - chrX 18320634 intron CG6023 - chrX_6_18320001 chrX_18320001 KN35_1-HE 3406 chrX 18429491 18429527 chrX 18434803 18434839 Transpac 20 5312 5.5 7.5 6.5 2.7 5348 chrX 18429491 intergenic not near genes chrX 18432165 intergenic not near genes chrX 18434839 intergenic not near genes chrX_20_18430001 chrX_18430001 KN35_1-HE 3407 chrX 18455232 18455242 chrX 18455313 18455323 9 81 5.5 9.5 7.5 1.1 91 chrX 18455232 intron CG32547 - chrX 18455278 intron CG32547 - chrX 18455323 intron CG32547 - chrX_9_18455001 chrX_18455001 KN35_1-HE 3408 chrX 18523547 18523570 chrX 18523650 18523673 6 103 3.0 4.5 3.8 1.2 126 chrX 18523547 intron Bx + chrX 18523610 intron Bx + chrX 18523673 intron Bx + chrX_6_18520001 chrX_18520001 KN35_1-HE 3409 chrX 18555381 18555409 chrX 18556905 18556933 transib2 10 1524 0.5 2.0 1.2 4.5 1552 chrX 18555381 intron Bx + chrX 18556157 intron Bx + chrX 18556933 intron Bx + chrX_10_18555001 chrX_18555001 KN35_1-HE 3410 chrX 18632057 18632063 chrX 18632150 18632156 4 93 0.0 1.0 0.5 2.7 99 chrX 18632057 intron wgn - chrX 18632106 intron wgn - chrX 18632156 intron wgn - chrX_4_18630001 chrX_18630001 KN35_1-HE 3411 chrX 18645012 18645048 chrX 18645111 18645147 22 99 1.0 1.5 1.2 10.0 135 chrX 18645012 intron Rip11 - chrX 18645080 intron Rip11 - chrX 18645147 intron Rip11 - chrX_22_18645001 chrX_18645001 KN35_1-HE 3412 chrX 18680765 18680768 chrX 18680876 18680879 4 111 10.5 6.0 8.2 0.4 114 chrX 18680765 intergenic not near genes chrX 18680822 intergenic not near genes chrX 18680879 intergenic not near genes chrX_4_18680001 chrX_18680001 KN35_1-HE 3413 chrX 18698936 18698971 chrX 18699013 18699048 8 77 3.5 4.5 4.0 1.6 112 chrX 18698936 intergenic not near genes chrX 18698992 intergenic not near genes chrX 18699048 intergenic not near genes chrX_8_18695001 chrX_18695001 KN35_1-HE 3414 chrX 18790388 18790421 chrX 18790472 18790505 6 84 3.5 1.5 2.5 1.7 117 chrX 18790388 intron Pk17E + chrX 18790446 intron Pk17E + chrX 18790505 intron Pk17E + chrX_6_18790001 chrX_18790001 KN35_1-HE 3415 chrX 18823819 18823825 chrX 18823896 18823902 4 77 10.0 0.0 5.0 0.7 83 chrX 18823819 intron CG42450 + chrX 18823860 intron CG42450 + chrX 18823902 intron CG42450 + chrX_4_18820001 chrX_18820001 KN35_1-HE 3416 chrX 18943653 18943665 chrX 18943738 18943750 5 85 0.0 10.0 5.0 0.8 97 chrX 18943653 intron CG43759 + chrX 18943702 intron CG43759 + chrX 18943750 intron CG43759 + chrX_5_18940001 chrX_18940001 KN35_1-HE 3417 chrX 18953377 18953396 chrX 18953457 18953476 7 80 0.0 5.0 2.5 2.0 99 chrX 18953377 intron CG43759 + chrX 18953426 intron CG43759 + chrX 18953476 intron CG43759 + chrX_7_18950001 chrX_18950001 KN35_1-HE 3418 chrX 19014358 19014394 chrX 19014438 19014474 17 80 3.5 2.5 3.0 4.2 116 chrX 19014358 intron CG43759 + chrX 19014416 intron CG43759 + chrX 19014474 intron CG43759 + chrX_17_19010001 chrX_19010001 KN35_1-HE 3419 chrX 19020587 19020623 chrX 19020666 19020702 19 79 4.5 8.0 6.2 2.6 115 chrX 19020587 intron CG43759 + chrX 19020644 intron CG43759 + chrX 19020702 intron CG43759 + chrX_19_19020001 chrX_19020001 KN35_1-HE 3420 chrX 19060402 19060436 chrX 19065187 19065221 Doc 18 4785 5.5 5.0 5.2 2.9 4819 chrX 19060402 intron CG14190 + chrX 19062812 intron CG14190 + chrX 19065221 intron CG14190 + chrX_18_19060001 chrX_19060001 KN35_1-HE 3421 chrX 19073685 19073693 chrX 19073773 19073781 4 88 10.5 5.5 8.0 0.4 96 chrX 19073685 intergenic not near genes chrX 19073733 intergenic not near genes chrX 19073781 intergenic not near genes chrX_4_19070001 chrX_19070001 KN35_1-HE 3422 chrX 19080326 19080358 chrX 19080433 19080465 11 107 5.5 5.5 5.5 1.7 139 chrX 19080326 intergenic not near genes chrX 19080396 intergenic not near genes chrX 19080465 intergenic not near genes chrX_11_19080001 chrX_19080001 KN35_1-HE 3423 chrX 19098759 19098779 chrX 19098838 19098858 10 79 1.5 2.5 2.0 3.3 99 chrX 19098759 intergenic not near genes chrX 19098808 intergenic not near genes chrX 19098858 intergenic not near genes chrX_10_19095001 chrX_19095001 KN35_1-HE 3424 chrX 19136551 19136585 chrX 19143472 19143505 412 7 6920 1.5 5.0 3.2 1.7 6954 chrX 19136551 intergenic not near genes chrX 19140028 intergenic not near genes chrX 19143505 3` UTR RhoGAP18B - chrX_7_19140001 chrX_19140001 KN35_1-HE 3425 chrX 19221708 19221741 chrX 19221788 19221821 17 80 2.0 2.5 2.2 5.3 113 chrX 19221708 intron CG7884 + chrX 19221764 intron CG7884 + chrX 19221821 intron CG7884 + chrX_17_19220001 chrX_19220001 KN35_1-HE 3426 chrX 19244936 19244956 chrX 19245024 19245044 7 88 2.0 2.5 2.2 2.2 108 chrX 19244936 3` UTR CG7889 + chrX 19244990 3` UTR CG7889 + chrX 19245044 3` UTR CG7889 + chrX_7_19240001 chrX_19240001 KN35_1-HE 3427 chrX 19258545 19258563 chrX 19258660 19258678 6 115 2.0 7.5 4.8 1.0 133 chrX 19258545 intron rictor - chrX 19258612 intron rictor - chrX 19258678 intron rictor - chrX_6_19255001 chrX_19255001 KN35_1-HE 3428 chrX 19289954 19289965 chrX 19290037 19290048 8 83 0.0 8.0 4.0 1.6 94 chrX 19289954 intron CG8034 - chrX 19290001 intron CG8034 - chrX 19290048 intron CG8034 - chrX_8_19290001 chrX_19290001 KN35_1-HE 3429 chrX 19339745 19339772 chrX 19339822 19339849 16 77 3.5 3.0 3.2 3.8 104 chrX 19339745 intron nAChRalpha7 - chrX 19339797 intron nAChRalpha7 - chrX 19339849 intron nAChRalpha7 - chrX_16_19335001 chrX_19335001 KN35_1-HE 3430 chrX 19356986 19357017 chrX 19358428 19358531 NOF 9 1498 9.5 0.0 4.8 1.6 1545 chrX 19356986 intron kek5 + chrX 19357758 intron kek5 + chrX 19358531 intron kek5 + chrX_9_19355001 chrX_19355001 KN35_1-HE 3431 chrX 19358426 19358435 chrX 19358556 19358565 8 130 0.0 7.5 3.8 1.7 139 chrX 19358426 intron kek5 + chrX 19358496 intron kek5 + chrX 19358565 intron kek5 + chrX_8_19355001 chrX_19355001 KN35_1-HE 3432 chrX 19380167 19380188 chrX 19380410 19380431 pogo 10 243 7.5 6.0 6.8 1.3 264 chrX 19380167 intron kek5 + chrX 19380299 intron kek5 + chrX 19380431 intron kek5 + chrX_10_19380001 chrX_19380001 KN35_1-HE 3433 chrX 19382618 19382631 chrX 19382705 19382718 6 87 0.0 8.5 4.2 1.2 100 chrX 19382618 intron kek5 + chrX 19382668 intron kek5 + chrX 19382718 intron kek5 + chrX_6_19380001 chrX_19380001 KN35_1-HE 3434 chrX 19396191 19396224 chrX 19396276 19396302 20 85 3.5 4.5 4.0 4.0 111 chrX 19396191 intron kek5 + chrX 19396246 intron kek5 + chrX 19396302 intron kek5 + chrX_20_19395001 chrX_19395001 KN35_1-HE 3435 chrX 19402589 19402616 chrX 19402670 19402697 18 81 0.5 7.0 3.8 3.8 108 chrX 19402589 intron kek5 + chrX 19402643 intron kek5 + chrX 19402697 intron kek5 + chrX_18_19400001 chrX_19400001 KN35_1-HE 3436 chrX 19459790 19459796 chrX 19459872 19459878 9 82 1.0 9.5 5.2 1.5 88 chrX 19459790 intron kek5 + chrX 19459834 intron kek5 + chrX 19459878 intron kek5 + chrX_9_19455001 chrX_19455001 KN35_1-HE 3437 chrX 19472121 19472157 chrX 19472692 19472728 jockey 14 571 3.5 8.0 5.8 2.1 607 chrX 19472121 intergenic kek5 + chrX 19472424 intergenic not near genes chrX 19472728 intergenic not near genes chrX_14_19470001 chrX_19470001 KN35_1-HE 3438 chrX 19500557 19500750 chrX 19500635 19500838 32 83 0.0 5.0 2.5 9.1 281 chrX 19500557 intron,intron CG14200 +,Pfrx + chrX 19500698 intron,intron CG14200 +,Pfrx + chrX 19500838 intron,intron CG14200 +,Pfrx + chrX_32_19500001 chrX_19500001 KN35_1-HE 3439 chrX 16136740 16136743 chrX 19541387 19541390 4 3404647 18.5 11.5 15.0 0.2 3404650 chrX 16136740 intron disco-r - chrX 17839065 intron CG6398 + chrX 19541390 intron CG32532 - chrX_4_17835001 chrX_17835001 KN35_1-HE 3440 chrX 19541436 19541448 chrX 19541517 19541529 8 81 2.0 1.0 1.5 3.2 93 chrX 19541436 intron CG32532 - chrX 19541482 intron CG32532 - chrX 19541529 intron CG32532 - chrX_8_19540001 chrX_19540001 KN35_1-HE 3441 chrX 19542047 19542081 chrX 19542127 19542161 12 80 0.5 4.0 2.2 3.8 114 chrX 19542047 intron CG32532 - chrX 19542104 intron CG32532 - chrX 19542161 intron CG32532 - chrX_12_19540001 chrX_19540001 KN35_1-HE 3442 chrX 19576558 19576592 chrX 19576637 19576671 13 79 1.5 2.5 2.0 4.3 113 chrX 19576558 intron Tao - chrX 19576614 intron Tao - chrX 19576671 intron Tao - chrX_13_19575001 chrX_19575001 KN35_1-HE 3443 chrX 19586376 19586406 chrX 19586460 19586490 18 84 4.0 4.0 4.0 3.6 114 chrX 19586376 exon CG14204 + chrX 19586433 exon CG14204 + chrX 19586490 exon CG14204 + chrX_18_19585001 chrX_19585001 KN35_1-HE 3444 chrX 19593945 19593975 chrX 19594031 19594061 16 86 5.5 2.5 4.0 3.2 116 chrX 19593945 exon CG14205 + chrX 19594003 intron CG14205 + chrX 19594061 intron CG14205 + chrX_16_19590001 chrX_19590001 KN35_1-HE 3445 chrX 19595731 19595740 chrX 19595826 19595835 5 95 2.0 4.5 3.2 1.2 104 chrX 19595731 intergenic CG14205 + chrX 19595783 intergenic CG14205 + chrX 19595835 intergenic CG14205 + chrX_5_19595001 chrX_19595001 KN35_1-HE 3446 chrX 19603672 19603688 chrX 19603755 19603771 15 83 0.0 4.5 2.2 4.7 99 chrX 19603672 intergenic not near genes chrX 19603722 intergenic not near genes chrX 19603771 intergenic not near genes chrX_15_19600001 chrX_19600001 KN35_1-HE 3447 chrX 19673512 19673541 chrX 19673591 19673620 6 79 0.5 2.0 1.2 2.7 108 chrX 19673512 intron et - chrX 19673566 intron et - chrX 19673620 intron et - chrX_6_19670001 chrX_19670001 KN35_1-HE 3448 chrX 19689402 19689433 chrX 19689481 19689512 13 79 0.5 3.0 1.8 4.6 110 chrX 19689402 intergenic Mer -,CG14227 - chrX 19689457 intergenic Mer - chrX 19689512 intergenic Mer - chrX_13_19685001 chrX_19685001 KN35_1-HE 3449 chrX 19693750 19693788 chrX 19693836 19693874 16 86 2.5 0.0 1.2 7.3 124 chrX 19693750 intergenic CG14229 -,Mer - chrX 19693812 intergenic CG14229 -,Mer - chrX 19693874 intergenic CG14229 -,Mer - chrX_16_19690001 chrX_19690001 KN35_1-HE 3450 chrX 19710071 19710103 chrX 19711858 19711889 S-element 9 1787 4.0 5.0 4.5 1.6 1818 chrX 19710071 intron meso18E - chrX 19710980 intron meso18E - chrX 19711889 intron meso18E - chrX_9_19710001 chrX_19710001 KN35_1-HE 3451 chrX 19724161 19724173 chrX 19724244 19724256 16 83 14.0 12.5 13.2 1.1 95 chrX 19724161 intron CG12531 + chrX 19724208 intron CG12531 + chrX 19724256 intron CG12531 + chrX_16_19720001 chrX_19720001 KN35_1-HE 3452 chrX 19738080 19738109 chrX 19738161 19738190 17 81 0.0 2.5 1.2 7.7 110 chrX 19738080 intron CG14234 + chrX 19738135 intron CG14234 + chrX 19738190 intron CG14234 + chrX_17_19735001 chrX_19735001 KN35_1-HE 3453 chrX 19755525 19755552 chrX 19755617 19755644 10 92 1.5 4.5 3.0 2.5 119 chrX 19755525 intron Pmp70 + chrX 19755584 intron Pmp70 + chrX 19755644 intron Pmp70 + chrX_10_19755001 chrX_19755001 KN35_1-HE 3454 chrX 19791259 19791284 chrX 19791354 19791379 13 95 10.0 5.5 7.8 1.5 120 chrX 19791259 intergenic not near genes chrX 19791319 intergenic not near genes chrX 19791379 intergenic not near genes chrX_13_19790001 chrX_19790001 KN35_1-HE 3455 chrX 19810255 19810286 chrX 19810356 19810387 28 101 5.0 6.5 5.8 4.1 132 chrX 19810255 intergenic not near genes chrX 19810321 intergenic not near genes chrX 19810387 intergenic not near genes chrX_28_19810001 chrX_19810001 KN35_1-HE 3456 chrX 19812740 19812759 chrX 19816029 19816048 Gypsy12A_LTR 5 3289 49.0 24.0 36.5 0.1 3308 chrX 19812740 5` UTR skpD + chrX 19814394 intergenic not near genes chrX 19816048 intergenic skpC + chrX_5_19810001 chrX_19810001 KN35_1-HE 3457 chrX 19822826 19822862 chrX 19822994 19823030 18 168 5.5 5.5 5.5 2.8 204 chrX 19822826 intergenic not near genes chrX 19822928 intergenic skpE - chrX 19823030 intergenic skpE - chrX_18_19820001 chrX_19820001 KN35_1-HE 3458 chrX 19829834 19829865 chrX 19830052 19830083 9 218 2.5 0.0 1.2 4.1 249 chrX 19829834 intergenic not near genes chrX 19829958 intergenic not near genes chrX 19830083 intergenic not near genes chrX_9_19825001 chrX_19825001 KN35_1-HE 3459 chrX 19891780 19891813 chrX 19891885 19891917 9 105 3.5 5.5 4.5 1.6 137 chrX 19891780 intron Hers + chrX 19891848 intron Hers + chrX 19891917 intron Hers + chrX_9_19890001 chrX_19890001 KN35_1-HE 3460 chrX 19897378 19897415 chrX 19897456 19897493 14 78 5.5 3.5 4.5 2.5 115 chrX 19897378 intron Hers + chrX 19897436 intron Hers + chrX 19897493 intron Hers + chrX_14_19895001 chrX_19895001 KN35_1-HE 3461 chrX 19898418 19898450 chrX 19898498 19898531 9 81 5.0 3.5 4.2 1.7 113 chrX 19898418 intron Hers + chrX 19898474 intron Hers + chrX 19898531 intron Hers + chrX_9_19895001 chrX_19895001 KN35_1-HE 3462 chrX 19983865 19983896 chrX 19983946 19983977 13 81 1.0 5.0 3.0 3.2 112 chrX 19983865 intergenic not near genes chrX 19983921 intergenic not near genes chrX 19983977 intergenic not near genes chrX_13_19980001 chrX_19980001 KN35_1-HE 3463 chrX 20038887 20038915 chrX 20038975 20039003 7 87 3.5 6.5 5.0 1.2 116 chrX 20038887 intron Dop2R - chrX 20038945 intron Dop2R - chrX 20039003 intron Dop2R - chrX_7_20035001 chrX_20035001 KN35_1-HE 3464 chrX 20056610 20056632 chrX 20056688 20056710 5 78 0.0 3.0 1.5 2.0 100 chrX 20056610 intron Dop2R - chrX 20056660 intron Dop2R - chrX 20056710 intron Dop2R - chrX_5_20055001 chrX_20055001 KN35_1-HE 3465 chrX 20070001 20070035 chrX 20070083 20070117 15 82 4.0 5.5 4.8 2.6 116 chrX 20070001 intergenic not near genes chrX 20070059 intergenic not near genes chrX 20070117 intergenic not near genes chrX_15_20070001 chrX_20070001 KN35_1-HE 3466 chrX 20082752 20082782 chrX 20082835 20082865 9 81 1.0 5.5 3.2 2.1 113 chrX 20082752 intergenic not near genes chrX 20082808 intergenic not near genes chrX 20082865 intergenic not near genes chrX_9_20080001 chrX_20080001 KN35_1-HE 3467 chrX 20093093 20093127 chrX 20093234 20093268 12 141 3.0 2.0 2.5 3.4 175 chrX 20093093 intergenic not near genes chrX 20093180 intergenic not near genes chrX 20093268 intergenic not near genes chrX_12_20090001 chrX_20090001 KN35_1-HE 3468 chrX 20097004 20097028 chrX 20111693 20111727 4 14694 14.0 0.0 7.0 0.5 14723 chrX 20097004 intergenic not near genes chrX 20104366 intergenic not near genes chrX 20111727 intergenic not near genes chrX_4_20100001 chrX_20100001 KN35_1-HE 3469 chrX 20117800 20117832 chrX 20117877 20117909 18 77 2.5 1.5 2.0 6.0 109 chrX 20117800 intergenic not near genes chrX 20117854 intergenic not near genes chrX 20117909 intergenic not near genes chrX_18_20115001 chrX_20115001 KN35_1-HE 3470 chrX 20130586 20130617 chrX 20130672 20130703 22 86 2.5 0.0 1.2 10.0 117 chrX 20130586 intergenic CG42582 - chrX 20130644 intergenic CG42582 - chrX 20130703 3` UTR CG42582 - chrX_22_20130001 chrX_20130001 KN35_1-HE 3471 chrX 20137149 20137169 chrX 20137235 20137255 11 86 2.0 3.0 2.5 3.1 106 chrX 20137149 intron CG15322 + chrX 20137202 intron CG15322 + chrX 20137255 intron CG15322 + chrX_11_20135001 chrX_20135001 KN35_1-HE 3472 chrX 20150374 20150393 chrX 20150471 20150490 8 97 0.0 4.5 2.2 2.5 116 chrX 20150374 intron CG9572 + chrX 20150432 intron CG9572 + chrX 20150490 intron CG9572 + chrX_8_20150001 chrX_20150001 KN35_1-HE 3473 chrX 20269931 20269955 chrX 20270014 20270038 6 83 4.0 0.5 2.2 1.9 107 chrX 20269931 intergenic Inx6 - chrX 20269984 intergenic Inx6 - chrX 20270038 intergenic Inx6 - chrX_6_20265001 chrX_20265001 KN35_1-HE 3474 chrX 20312879 20312908 chrX 20312958 20312987 22 79 3.5 4.0 3.8 4.6 108 chrX 20312879 intron CG1504 - chrX 20312933 intron CG1504 - chrX 20312987 intron CG1504 - chrX_22_20310001 chrX_20310001 KN35_1-HE 3475 chrX 20326505 20326539 chrX 20326596 20326630 27 91 3.5 3.0 3.2 6.4 125 chrX 20326505 intron CG1504 - chrX 20326568 intron CG1504 - chrX 20326630 intron CG1504 - chrX_27_20325001 chrX_20325001 KN35_1-HE 3476 chrX 20331203 20331482 chrX 20331373 20331561 17 159 0.0 1.0 0.5 11.3 358 chrX 20331203 intergenic not near genes chrX 20331382 intergenic not near genes chrX 20331561 intergenic not near genes chrX_17_20330001 chrX_20330001 KN35_1-HE 3477 chrX 20356226 20356246 chrX 20356326 20356346 21 100 6.5 7.0 6.8 2.7 120 chrX 20356226 intergenic not near genes chrX 20356286 intergenic not near genes chrX 20356346 intergenic not near genes chrX_21_20355001 chrX_20355001 KN35_1-HE 3478 chrX 20365145 20365173 chrX 20365228 20365277 9 85 2.5 0.0 1.2 4.1 132 chrX 20365145 intergenic not near genes chrX 20365211 intergenic not near genes chrX 20365277 intergenic not near genes chrX_9_20365001 chrX_20365001 KN35_1-HE 3479 chrX 20377326 20377345 chrX 20378792 20378813 hobo 8 1468 1.5 5.5 3.5 1.8 1487 chrX 20377326 intergenic not near genes chrX 20378070 intergenic not near genes chrX 20378813 intergenic not near genes chrX_8_20375001 chrX_20375001 KN35_1-HE 3480 chrX 20383783 20383809 chrX 20384304 20384330 17 521 39.5 34.5 37.0 0.4 547 chrX 20383783 intergenic not near genes chrX 20384056 intergenic not near genes chrX 20384330 intergenic not near genes chrX_17_20380001 chrX_20380001 KN35_1-HE 3481 chrX 20437985 20438017 chrX 20438071 20438103 18 86 7.0 4.0 5.5 2.8 118 chrX 20437985 intron CG1695 + chrX 20438044 intron CG1695 + chrX 20438103 intron CG1695 + chrX_18_20435001 chrX_20435001 KN35_1-HE 3482 chrX 20476960 20476976 chrX 20477051 20477067 9 91 12.0 5.5 8.8 0.9 107 chrX 20476960 intron RhoGAP19D - chrX 20477014 intron RhoGAP19D - chrX 20477067 intron RhoGAP19D - chrX_9_20475001 chrX_20475001 KN35_1-HE 3483 chrX 20483872 20483904 chrX 20483958 20483989 22 86 4.5 3.5 4.0 4.4 117 chrX 20483872 intron RhoGAP19D - chrX 20483930 intron RhoGAP19D - chrX 20483989 intron RhoGAP19D - chrX_22_20480001 chrX_20480001 KN35_1-HE 3484 chrX 20498092 20498117 chrX 20498169 20498194 14 77 4.5 7.5 6.0 2.0 102 chrX 20498092 intron RhoGAP19D - chrX 20498143 intron RhoGAP19D - chrX 20498194 intron RhoGAP19D - chrX_14_20495001 chrX_20495001 KN35_1-HE 3485 chrX 20498892 20498898 chrX 20499071 20499078 4 180 7.0 10.5 8.8 0.4 186 chrX 20498892 intron RhoGAP19D - chrX 20498985 intron RhoGAP19D - chrX 20499078 intron RhoGAP19D - chrX_4_20495001 chrX_20495001 KN35_1-HE 3486 chrX 20504122 20504158 chrX 20505644 20505680 transib2 25 1522 4.5 3.5 4.0 5.0 1558 chrX 20504122 intron RhoGAP19D - chrX 20504901 intron RhoGAP19D - chrX 20505680 intron RhoGAP19D - chrX_25_20500001 chrX_20500001 KN35_1-HE 3487 chrX 20512389 20512418 chrX 20512467 20512496 4 78 6.0 6.0 6.0 0.6 107 chrX 20512389 intron CG1812 + chrX 20512442 intron CG1812 + chrX 20512496 intron CG1812 + chrX_4_20510001 chrX_20510001 KN35_1-HE 3488 chrX 20526473 20526716 chrX 20526590 20526800 13 87 2.5 0.0 1.2 5.9 327 chrX 20526473 intergenic not near genes chrX 20526636 intergenic not near genes chrX 20526800 intergenic not near genes chrX_13_20525001 chrX_20525001 KN35_1-HE 3489 chrX 20528418 20528452 chrX 20528591 20528625 9 173 2.0 0.0 1.0 4.5 207 chrX 20528418 intergenic CG42579 + chrX 20528522 intergenic CG42579 + chrX 20528625 intergenic not near genes chrX_9_20525001 chrX_20525001 KN35_1-HE 3490 chrX 20559046 20559058 chrX 20559124 20559136 8 78 1.0 3.0 2.0 2.7 90 chrX 20559046 intron RunxB + chrX 20559091 intron RunxB + chrX 20559136 intron RunxB + chrX_8_20555001 chrX_20555001 KN35_1-HE 3491 chrX 20588775 20588949 chrX 20588854 20589045 32 85 4.5 9.5 7.0 4.0 270 chrX 20588775 intergenic not near genes chrX 20588910 intergenic not near genes chrX 20589045 intergenic not near genes chrX_32_20585001 chrX_20585001 KN35_1-HE 3492 chrX 20622749 20622876 chrX 20622831 20622976 34 90 0.0 0.0 0.0 34.0 227 chrX 20622749 intron RunxA - chrX 20622862 intron RunxA - chrX 20622976 intron RunxA - chrX_34_20620001 chrX_20620001 KN35_1-HE 3493 chrX 20638716 20638736 chrX 20638809 20638829 7 93 4.0 0.0 2.0 2.3 113 chrX 20638716 intergenic not near genes chrX 20638772 intergenic not near genes chrX 20638829 intergenic not near genes chrX_7_20635001 chrX_20635001 KN35_1-HE 3494 chrX 20645268 20645361 chrX 20645347 20645558 12 138 0.0 0.0 0.0 12.0 290 chrX 20645268 intergenic not near genes chrX 20645413 intergenic not near genes chrX 20645558 intergenic not near genes chrX_12_20645001 chrX_20645001 KN35_1-HE 3495 chrX 20654403 20654434 chrX 20654486 20654517 9 83 1.5 0.5 1.0 4.5 114 chrX 20654403 intergenic not near genes chrX 20654460 intergenic not near genes chrX 20654517 intergenic not near genes chrX_9_20650001 chrX_20650001 KN35_1-HE 3496 chrX 20662315 20662330 chrX 20662399 20662414 8 84 7.0 0.0 3.5 1.8 99 chrX 20662315 intron CG1835 + chrX 20662364 intron CG1835 + chrX 20662414 intron CG1835 + chrX_8_20660001 chrX_20660001 KN35_1-HE 3497 chrX 20665770 20665787 chrX 20665858 20665875 10 88 4.0 0.0 2.0 3.3 105 chrX 20665770 intron CG1835 + chrX 20665822 intron CG1835 + chrX 20665875 intron CG1835 + chrX_10_20665001 chrX_20665001 KN35_1-HE 3498 chrX 20668985 20669001 chrX 20669062 20669078 6 77 9.0 0.0 4.5 1.1 93 chrX 20668985 intron CG1835 + chrX 20669032 intron CG1835 + chrX 20669078 intron CG1835 + chrX_6_20665001 chrX_20665001 KN35_1-HE 3499 chrX 20754339 20754372 chrX 20754440 20754473 20 101 7.5 5.0 6.2 2.8 134 chrX 20754339 intergenic not near genes chrX 20754406 intergenic not near genes chrX 20754473 intergenic not near genes chrX_20_20750001 chrX_20750001 KN35_1-HE 3500 chrX 20761836 20761860 chrX 20761921 20761945 13 85 5.5 4.5 5.0 2.2 109 chrX 20761836 3` UTR shakB - chrX 20761890 3` UTR shakB - chrX 20761945 3` UTR shakB - chrX_13_20760001 chrX_20760001 KN35_1-HE 3501 chrX 20812563 20812598 chrX 20812654 20812689 19 91 3.5 3.0 3.2 4.5 126 chrX 20812563 intron shakB - chrX 20812626 intron shakB - chrX 20812689 intron shakB - chrX_19_20810001 chrX_20810001 KN35_1-HE 3502 chrX 20836736 20836749 chrX 20844328 20844352 roo 7 7601 2.5 0.5 1.5 2.8 7616 chrX 20836736 intron shakB - chrX 20840544 intron shakB - chrX 20844352 intron shakB - chrX_7_20840001 chrX_20840001 KN35_1-HE 3503 chrX 20870664 20870681 chrX 20870756 20870773 8 92 3.5 9.0 6.2 1.1 109 chrX 20870664 intron shakB - chrX 20870718 intron shakB - chrX 20870773 intron shakB - chrX_8_20870001 chrX_20870001 KN35_1-HE 3504 chrX 20911902 20911917 chrX 20911988 20911996 8 85 10.5 7.0 8.8 0.8 94 chrX 20911902 intron shakB - chrX 20911949 intron shakB - chrX 20911996 intron shakB - chrX_8_20910001 chrX_20910001 KN35_1-HE 3505 chrX 20940716 20940750 chrX 20942186 20942234 hobo 5 1476 5.0 0.5 2.8 1.3 1518 chrX 20940716 intergenic not near genes chrX 20941475 intergenic not near genes chrX 20942234 intergenic not near genes chrX_5_20940001 chrX_20940001 KN35_1-HE 3506 chrX 20948326 20948354 chrX 20948411 20948439 17 85 0.0 0.5 0.2 14.2 113 chrX 20948326 intergenic not near genes chrX 20948382 intergenic not near genes chrX 20948439 intergenic not near genes chrX_17_20945001 chrX_20945001 KN35_1-HE 3507 chrX 20956987 20957007 chrX 20962430 20962450 I-element 9 5443 0.0 8.0 4.0 1.8 5463 chrX 20956987 intergenic not near genes chrX 20959718 intergenic not near genes chrX 20962450 intergenic Ser6 - chrX_9_20955001 chrX_20955001 KN35_1-HE 3508 chrX 20966018 20966052 chrX 20966102 20966137 13 85 5.0 3.0 4.0 2.6 119 chrX 20966018 intergenic not near genes chrX 20966078 intergenic not near genes chrX 20966137 intergenic not near genes chrX_13_20965001 chrX_20965001 KN35_1-HE 3509 chrX 20980842 20980872 chrX 20980919 20980949 8 77 3.5 5.0 4.2 1.5 107 chrX 20980842 intergenic not near genes chrX 20980896 intergenic not near genes chrX 20980949 intergenic not near genes chrX_8_20980001 chrX_20980001 KN35_1-HE 3510 chrX 20996640 20996664 chrX 20996810 20996834 12 170 0.0 3.5 1.8 4.3 194 chrX 20996640 intergenic not near genes chrX 20996737 intergenic not near genes chrX 20996834 intergenic not near genes chrX_12_20995001 chrX_20995001 KN35_1-HE 3511 chrX 21009853 21009884 chrX 21009938 21009970 12 86 3.0 6.5 4.8 2.1 117 chrX 21009853 intergenic not near genes chrX 21009912 intergenic not near genes chrX 21009970 intergenic not near genes chrX_12_21005001 chrX_21005001 KN35_1-HE 3512 chrX 21029173 21029182 chrX 21029392 21029401 8 219 0.0 7.0 3.5 1.8 228 chrX 21029173 3` UTR CG1529 - chrX 21029287 3` UTR CG1529 - chrX 21029401 3` UTR CG1529 - chrX_8_21025001 chrX_21025001 KN35_1-HE 3513 chrX 21044747 21044767 chrX 21044832 21044852 5 85 3.5 3.0 3.2 1.2 105 chrX 21044747 intergenic Cbs + chrX 21044800 intergenic Cbs + chrX 21044852 intergenic Cbs + chrX_5_21040001 chrX_21040001 KN35_1-HE 3514 chrX 21058670 21058678 chrX 21058769 21058777 5 99 4.5 2.0 3.2 1.2 107 chrX 21058670 intron bves + chrX 21058724 intron bves + chrX 21058777 intron bves + chrX_5_21055001 chrX_21055001 KN35_1-HE 3515 chrX 21076327 21076357 chrX 21076407 21076438 9 81 8.0 7.0 7.5 1.1 111 chrX 21076327 intron bves + chrX 21076382 intron bves + chrX 21076438 intron bves + chrX_9_21075001 chrX_21075001 KN35_1-HE 3516 chrX 20144573 20144578 chrX 21085285 21085290 5 940712 13.5 26.5 20.0 0.2 940717 chrX 20144573 intergenic not near genes chrX 20614932 intron RunxA - chrX 21085290 intergenic not near genes chrX_5_20610001 chrX_20610001 KN35_1-HE 3517 chrX 21086127 21086165 chrX 21087157 21087192 jockey 23 1030 3.5 7.0 5.2 3.7 1065 chrX 21086127 intergenic not near genes chrX 21086660 intergenic not near genes chrX 21087192 intergenic not near genes chrX_23_21085001 chrX_21085001 KN35_1-HE 3518 chrX 21098688 21098702 chrX 21099066 21099080 9 378 4.0 0.0 2.0 3.0 392 chrX 21098688 intron,intron,intron CG11566 +,stg1 +,CG15446 - chrX 21098884 intron,intron,intron CG11566 +,stg1 +,CG15446 - chrX 21099080 intron,intron,intron CG11566 +,stg1 +,CG15446 - chrX_9_21095001 chrX_21095001 KN35_1-HE 3519 chrX 21131612 21131644 chrX 21131693 21131725 16 81 1.5 5.0 3.2 3.8 113 chrX 21131612 intron CG34120 + chrX 21131668 intron CG34120 + chrX 21131725 intron CG34120 + chrX_16_21130001 chrX_21130001 KN35_1-HE 3520 chrX 21187798 21187803 chrX 21187886 21187891 4 88 4.5 2.5 3.5 0.9 93 chrX 21187798 intergenic CR45506 + chrX 21187844 intergenic CR45506 + chrX 21187891 intergenic CR45506 + chrX_4_21185001 chrX_21185001 KN35_1-HE 3521 chrX 21255493 21255512 chrX 21255620 21255632 13 126 4.5 0.0 2.2 4.1 139 chrX 21255493 intron CG32521 - chrX 21255562 intron CG32521 - chrX 21255632 intron CG32521 - chrX_13_21255001 chrX_21255001 KN35_1-HE 3522 chrX 21268071 21268086 chrX 21268153 21268168 8 82 1.0 6.0 3.5 1.8 97 chrX 21268071 intron CG32521 - chrX 21268120 intron CG32521 - chrX 21268168 intron CG32521 - chrX_8_21265001 chrX_21265001 KN35_1-HE 3523 chrX 21343276 21343282 chrX 21343359 21343365 8 83 0.0 7.5 3.8 1.7 89 chrX 21343276 intron fliI + chrX 21343320 intron fliI + chrX 21343365 intron fliI + chrX_8_21340001 chrX_21340001 KN35_1-HE 3524 chrX 21345114 21345145 chrX 21345196 21345227 19 82 4.0 3.5 3.8 4.0 113 chrX 21345114 intergenic fliI +,dod + chrX 21345170 intergenic fliI +,dod + chrX 21345227 intergenic dod +,fliI + chrX_19_21345001 chrX_21345001 KN35_1-HE 3525 chrX 21392043 21392057 chrX 21392123 21392137 4 80 5.0 3.5 4.2 0.8 94 chrX 21392043 intergenic not near genes chrX 21392090 intergenic not near genes chrX 21392137 intergenic not near genes chrX_4_21390001 chrX_21390001 KN35_1-HE 3526 chrX 21393455 21393489 chrX 21393545 21393579 17 90 2.0 4.0 3.0 4.2 124 chrX 21393455 intergenic not near genes chrX 21393517 intergenic not near genes chrX 21393579 intergenic not near genes chrX_17_21390001 chrX_21390001 KN35_1-HE 3527 chrX 21397602 21397630 chrX 21397685 21397713 15 83 5.0 5.0 5.0 2.5 111 chrX 21397602 intergenic lcs - chrX 21397658 intergenic lcs - chrX 21397713 intergenic lcs - chrX_15_21395001 chrX_21395001 KN35_1-HE 3528 chrX 21399417 21399454 chrX 21399495 21399532 19 78 7.0 5.0 6.0 2.7 115 chrX 21399417 intergenic not near genes chrX 21399474 intergenic not near genes chrX 21399532 intergenic CR45500 - chrX_19_21395001 chrX_21395001 KN35_1-HE 3529 chrX 21399900 21399917 chrX 21400312 21400329 8 412 4.5 9.0 6.8 1.0 429 chrX 21399900 intergenic CR45500 - chrX 21400114 3` UTR CR45500 - chrX 21400329 3` UTR CR45500 - chrX_8_21400001 chrX_21400001 KN35_1-HE 3530 chrX 21401686 21401696 chrX 21401763 21401773 5 77 6.5 4.0 5.2 0.8 87 chrX 21401686 intergenic not near genes chrX 21401730 intergenic not near genes chrX 21401773 intergenic not near genes chrX_5_21400001 chrX_21400001 KN35_1-HE 3531 chrX 21408103 21408117 chrX 21408180 21408194 9 77 5.5 1.0 3.2 2.1 91 chrX 21408103 intergenic not near genes chrX 21408148 intergenic not near genes chrX 21408194 intergenic not near genes chrX_9_21405001 chrX_21405001 KN35_1-HE 3532 chrX 21410643 21410672 chrX 21410723 21410752 9 80 3.5 2.0 2.8 2.4 109 chrX 21410643 intergenic CR45003 - chrX 21410698 intergenic CR45003 - chrX 21410752 intergenic CR45003 - chrX_9_21410001 chrX_21410001 KN35_1-HE 3533 chrX 21455212 21455245 chrX 21455392 21455425 10 180 1.0 1.0 1.0 5.0 213 chrX 21455212 intron CG42343 - chrX 21455318 intron CG42343 - chrX 21455425 intron CG42343 - chrX_10_21455001 chrX_21455001 KN35_1-HE 3534 chrX 21458694 21458724 chrX 21464131 21464161 Ivk 14 5437 5.0 5.5 5.2 2.3 5467 chrX 21458694 intergenic not near genes chrX 21461428 intergenic not near genes chrX 21464161 intergenic not near genes chrX_14_21460001 chrX_21460001 KN35_1-HE 3535 chrX 21472753 21472784 chrX 21472831 21472862 10 78 5.0 4.0 4.5 1.8 109 chrX 21472753 intergenic not near genes chrX 21472808 intergenic not near genes chrX 21472862 intergenic not near genes chrX_10_21470001 chrX_21470001 KN35_1-HE 3536 chrX 21474404 21474431 chrX 21474771 21474798 1731 9 367 5.0 0.5 2.8 2.4 394 chrX 21474404 intergenic not near genes chrX 21474601 intergenic not near genes chrX 21474798 intergenic not near genes chrX_9_21470001 chrX_21470001 KN35_1-HE 3537 chrX 21493872 21493883 chrX 21493950 21493955 13 77 9.5 18.5 14.0 0.9 83 chrX 21493872 intergenic not near genes chrX 21493914 intergenic not near genes chrX 21493955 intergenic not near genes chrX_13_21490001 chrX_21490001 KN35_1-HE 3538 chrX 21510524 21510550 chrX 21510606 21510629 7 82 2.0 0.0 1.0 3.5 105 chrX 21510524 intron CR45082 - chrX 21510576 intron CR45082 - chrX 21510629 intron CR45082 - chrX_7_21510001 chrX_21510001 KN35_1-HE 3539 chrX 21565415 21565445 chrX 21565494 21565524 16 79 6.5 7.0 6.8 2.1 109 chrX 21565415 intergenic not near genes chrX 21565470 intergenic not near genes chrX 21565524 intergenic not near genes chrX_16_21565001 chrX_21565001 KN35_1-HE 3540 chrX 21656219 21656246 chrX 21656318 21656345 10 97 3.0 5.0 4.0 2.0 126 chrX 21656219 intergenic not near genes chrX 21656282 intergenic not near genes chrX 21656345 intergenic not near genes chrX_10_21655001 chrX_21655001 KN35_1-HE 3541 chrX 21668254 21668290 chrX 21668340 21668376 40 86 40.0 38.0 39.0 1.0 122 chrX 21668254 intergenic not near genes chrX 21668315 intergenic not near genes chrX 21668376 intergenic not near genes chrX_40_21665001 chrX_21665001 KN35_1-HE 3542 chrX 22495004 22495024 chrX 22495086 22495106 6 81 3.5 7.0 5.2 1.0 102 chrX 22495004 intron l(1)G0196 + chrX 22495055 intron l(1)G0196 + chrX 22495106 intron l(1)G0196 + chrX_6_22495001 chrX_22495001 KN35_1-HE 3543 chrX 22504691 22504720 chrX 22504789 22504818 5 98 2.0 0.5 1.2 2.3 127 chrX 22504691 intron l(1)G0196 + chrX 22504754 intron l(1)G0196 + chrX 22504818 intron l(1)G0196 + chrX_5_22500001 chrX_22500001 KN35_1-HE 3544 chrX 22522637 22522661 chrX 22525457 22525482 NOF 17 2821 2.5 2.5 2.5 4.9 2845 chrX 22522637 intron CG17600 + chrX 22524060 intron CG17600 + chrX 22525482 intron CG17600 + chrX_17_22520001 chrX_22520001 KN35_1-HE 3545 chrX 22535262 22535296 chrX 22535363 22535397 16 101 3.5 2.0 2.8 4.2 135 chrX 22535262 intron,3` UTR,3` UTR CG17600 +,S6kII +,CG17598 - chrX 22535330 intron,3` UTR,3` UTR CG17600 +,S6kII +,CG17598 - chrX 22535397 intron,3` UTR,3` UTR CG17600 +,S6kII +,CG17598 - chrX_16_22535001 chrX_22535001 KN35_1-HE 3546 chrX 22538970 22539002 chrX 22539150 22539182 10 180 3.5 2.5 3.0 2.5 212 chrX 22538970 intron,intron CG17600 +,CG17598 - chrX 22539076 intron,intron CG17600 +,CG17598 - chrX 22539182 intron,intron CG17600 +,CG17598 - chrX_10_22535001 chrX_22535001 KN35_1-HE 3547 chrX 22542212 22542240 chrX 22542290 22542318 11 78 5.0 4.0 4.5 2.0 106 chrX 22542212 intergenic CG17599 -,CG17600 + chrX 22542265 intergenic CG17599 -,CG17600 + chrX 22542318 intergenic CG17599 -,CG17600 + chrX_11_22540001 chrX_22540001 KN35_1-HE 3548 chrX 22563868 22563898 chrX 22564204 22564234 18 336 1.5 5.0 3.2 4.3 366 chrX 22563868 intergenic not near genes chrX 22564051 intergenic not near genes chrX 22564234 intergenic not near genes chrX_18_22560001 chrX_22560001 KN35_1-HE 3549 chrX 22584336 22584366 chrX 22584428 22584458 14 92 2.5 4.5 3.5 3.1 122 chrX 22584336 intron Cda4 - chrX 22584397 intron Cda4 - chrX 22584458 intron Cda4 - chrX_14_22580001 chrX_22580001 KN35_1-HE 3550 chrX 22585504 22585526 chrX 22585588 22585610 9 84 5.5 2.0 3.8 1.9 106 chrX 22585504 intron Cda4 - chrX 22585557 intron Cda4 - chrX 22585610 intron Cda4 - chrX_9_22585001 chrX_22585001 KN35_1-HE 3551 chrX 22620496 22620519 chrX 22626764 22626787 297 8 6267 1.5 3.5 2.5 2.3 6291 chrX 22620496 intron Cda4 - chrX 22623642 intron Cda4 - chrX 22626787 intron Cda4 - chrX_8_22620001 chrX_22620001 KN35_1-HE 3552 chrX 22631773 22631806 chrX 22631872 22631905 12 99 1.0 2.0 1.5 4.8 132 chrX 22631773 intron Cda4 - chrX 22631839 intron Cda4 - chrX 22631905 intron Cda4 - chrX_12_22630001 chrX_22630001 KN35_1-HE 3553 chrX 22643121 22643143 chrX 22644038 22644060 16 917 2.5 9.5 6.0 2.3 939 chrX 22643121 intergenic not near genes chrX 22643590 intergenic not near genes chrX 22644060 intergenic not near genes chrX_16_22640001 chrX_22640001 KN35_1-HE 3554 chrX 22586019 22586033 chrX 22645335 22645349 7 59316 13.0 5.5 9.2 0.7 59330 chrX 22586019 intron Cda4 - chrX 22615684 intron Cda4 - chrX 22645349 intergenic not near genes chrX_7_22615001 chrX_22615001 KN35_1-HE 3555 chrX 22681479 22681515 chrX 22688938 22688974 HMS-Beagle2 4 7459 0.0 7.0 3.5 0.9 7495 chrX 22681479 intron CR44997 + chrX 22685226 intron CR44997 + chrX 22688974 intron CR44997 + chrX_4_22685001 chrX_22685001 KN35_1-HE 3556 chrX 22690490 22690504 chrX 22690586 22690600 5 96 7.5 13.0 10.2 0.4 110 chrX 22690490 intron CR44997 + chrX 22690545 intron CR44997 + chrX 22690600 intron CR44997 + chrX_5_22690001 chrX_22690001 KN35_1-HE 3557 chrX 22692452 22692489 chrX 22692531 22692568 17 79 3.5 2.5 3.0 4.2 116 chrX 22692452 intron CR44997 + chrX 22692510 intron CR44997 + chrX 22692568 intron CR44997 + chrX_17_22690001 chrX_22690001 KN35_1-HE 3558 chrX 22696163 22696199 chrX 22696241 22696277 14 78 2.0 4.0 3.0 3.5 114 chrX 22696163 intron CR44997 + chrX 22696220 intron CR44997 + chrX 22696277 intron CR44997 + chrX_14_22695001 chrX_22695001 KN35_1-HE 3559 chrX 22697496 22697523 chrX 22701794 22701821 Juan 18 4298 5.5 10.0 7.8 2.0 4325 chrX 22697496 intron CR44997 + chrX 22699658 intron CR44997 + chrX 22701821 intron CR44997 + chrX_18_22695001 chrX_22695001 KN35_1-HE 3560 chrX 22771506 22771534 chrX 22774798 22774826 297 7 3292 5.5 3.0 4.2 1.3 3320 chrX 22771506 intron CR44997 + chrX 22773166 intron CR44997 + chrX 22774826 intron CR44997 + chrX_7_22770001 chrX_22770001 KN35_1-HE 3561 chrX 22798751 22798767 chrX 22798916 22798933 11 166 0.0 4.0 2.0 3.7 182 chrX 22798751 intergenic not near genes chrX 22798842 intergenic not near genes chrX 22798933 intergenic not near genes chrX_11_22795001 chrX_22795001 KN35_1-HE 3562 chrX 22811990 22812002 chrX 22816764 22816776 F-element 7 4774 14.0 8.0 11.0 0.6 4786 chrX 22811990 intergenic CG12446 - chrX 22814383 intergenic not near genes chrX 22816776 intergenic not near genes chrX_7_22810001 chrX_22810001 KN35_1-HE 3563 chrX 22841751 22841778 chrX 22841845 22841872 12 94 1.5 0.0 0.8 6.7 121 chrX 22841751 intron,intron fog -,CG42346 + chrX 22841812 intron,intron fog -,CG42346 + chrX 22841872 intron,intron fog -,CG42346 + chrX_12_22840001 chrX_22840001 KN35_1-HE 3564 chrX 22864698 22864728 chrX 22864776 22864806 18 78 4.0 0.0 2.0 6.0 108 chrX 22864698 intron CG42346 + chrX 22864752 intron CG42346 + chrX 22864806 intron CG42346 + chrX_18_22860001 chrX_22860001 KN35_1-HE 3565 chrX 22876550 22876579 chrX 22876737 22876766 13 187 2.5 12.5 7.5 1.5 216 chrX 22876550 intron CG42346 + chrX 22876658 intron CG42346 + chrX 22876766 intron CG42346 + chrX_13_22875001 chrX_22875001 KN35_1-HE 3566 chrX 22889655 22889684 chrX 22889955 22889984 11 300 3.0 6.0 4.5 2.0 329 chrX 22889655 intergenic not near genes chrX 22889820 intergenic not near genes chrX 22889984 intergenic not near genes chrX_11_22885001 chrX_22885001 KN35_1-HE 3567 chrX 22890906 22890931 chrX 22890988 22891013 7 82 2.5 3.5 3.0 1.8 107 chrX 22890906 intergenic not near genes chrX 22890960 intergenic not near genes chrX 22891013 intergenic not near genes chrX_7_22890001 chrX_22890001 KN35_1-HE 3568 chrX 22894402 22894409 chrX 22895109 22895116 4 707 9.0 4.5 6.8 0.5 714 chrX 22894402 intergenic not near genes chrX 22894759 intergenic not near genes chrX 22895116 intergenic not near genes chrX_4_22890001 chrX_22890001 KN35_1-HE 3569 chrX 22908987 22908995 chrX 22913213 22913221 Burdock 6 4226 2.0 9.5 5.8 0.9 4234 chrX 22908987 intergenic not near genes chrX 22911104 intergenic not near genes chrX 22913221 intergenic not near genes chrX_6_22910001 chrX_22910001 KN35_1-HE 3570 chrX 22927101 22927107 chrX 22927806 22927812 4 705 7.0 6.5 6.8 0.5 711 chrX 22927101 intergenic not near genes chrX 22927456 intergenic not near genes chrX 22927812 intergenic not near genes chrX_4_22925001 chrX_22925001 KN35_1-HE 3571 chrX 22967393 22967517 chrX 23154542 23154688 diver 5 187155 2.0 10.5 6.2 0.7 187295 chrX 22967393 intergenic not near genes chrX 23061040 intergenic not near genes chrX 23154688 intergenic not near genes chrX_5_23060001 chrX_23060001 KN35_1-HE 3572 chrX 22987101 22987134 chrX 22989760 22989794 Burdock 11 2660 0.5 2.0 1.2 5.0 2693 chrX 22987101 intron,intron stnA -,stnB - chrX 22988448 intron,intron stnA -,stnB - chrX 22989794 intron,intron stnA -,stnB - chrX_11_22985001 chrX_22985001 KN35_1-HE 3573 chrX 22996314 22996338 chrX 23003547 23003571 roo 11 7233 1.5 4.0 2.8 2.9 7257 chrX 22996314 intron,intron stnA -,stnB - chrX 22999942 intron,intron stnA -,stnB - chrX 23003571 intron,intron stnA -,stnB - chrX_11_22995001 chrX_22995001 KN35_1-HE 3574 chrX 23045247 23045250 chrX 23045334 23045337 4 87 8.0 4.5 6.2 0.6 90 chrX 23045247 intron CG12061 + chrX 23045292 intron CG12061 + chrX 23045337 intron CG12061 + chrX_4_23045001 chrX_23045001 KN35_1-HE 3575 chrX 23066043 23066072 chrX 23066185 23066214 12 142 1.5 5.5 3.5 2.7 171 chrX 23066043 intergenic not near genes chrX 23066128 intergenic not near genes chrX 23066214 intergenic not near genes chrX_12_23065001 chrX_23065001 KN35_1-HE 3576 chrX 23086474 23086496 chrX 23086658 23086680 8 184 2.0 3.0 2.5 2.3 206 chrX 23086474 3` UTR,3` UTR CG17159 -,CG17162 - chrX 23086577 3` UTR,3` UTR CG17159 -,CG17162 - chrX 23086680 3` UTR,3` UTR CG17159 -,CG17162 - chrX_8_23085001 chrX_23085001 KN35_1-HE 3577 chrY 311341 311345 chrY 311459 311463 7 118 2.0 0.0 1.0 3.5 122 chrY 311341 intergenic not near genes chrY 311402 intergenic not near genes chrY 311463 intergenic not near genes chrY_7_310001 chrY_310001 KN35_1-HE