SV# Chr Chr_coord_5p Chr_coord_3p TE TE_coord_start TE_coord_end Reads_collapsed Chr_Coord_Dist Symmetry avg_blat_score Norm_RefGen_Reads Coverage_Ratio classification comments insert_code loci_code Sym_score libname 1 chr2L 171264 171342 FB 18 33 5 78 '2-3 67.53 1.0 2.5 intron spen + chr2L_5_170001 chr2L_170001 0.40 EF39_1-HE 2 chr2L 400912 400975 I-element 4876 5317 17 63 '8-9 67.27 7.4 2.0 exon CG4213 - chr2L_17_400001 chr2L_400001 0.47 EF39_1-HE 3 chr2L 924536 924593 Stalker2 7610 7651 11 57 '6-5 69.74 6.0 1.6 intron CG4341 + chr2L_11_920001 chr2L_920001 0.55 EF39_1-HE 4 chr2L 1522896 1523003 hobo 2928 5 14 107 '7-7 59.29 1.7 5.2 exon Or22b + chr2L_14_1520001 chr2L_1520001 0.50 EF39_1-HE 5 chr2L 2222543 2222672 pogo 2095 2 19 129 '8-11 67.12 4.3 3.6 intron papi + chr2L_19_2220001 chr2L_2220001 0.42 EF39_1-HE 6 chr2L 2502681 2502805 roo 8673 409 22 124 '6-16 65.43 5.9 3.2 intergenic not near genes chr2L_22_2500001 chr2L_2500001 0.27 EF39_1-HE 7 chr2L 2520771 2521049 412 7127 494 27 278 '2-25 66.86 6.4 3.6 intergenic not near genes chr2L_27_2520001 chr2L_2520001 0.07 EF39_1-HE 8 chr2L 2561672 2561759 mdg1 413 36 6 87 '5-1 58.56 3.3 1.4 intergenic not near genes chr2L_6_2560001 chr2L_2560001 0.83 EF39_1-HE 9 chr2L 2790165 2790294 hobo 3 2709 11 129 '5-6 71.32 7.9 1.2 intron Syt1 - chr2L_11_2790001 chr2L_2790001 0.45 EF39_1-HE 10 chr2L 2874755 2874784 BS 4995 5024 5 29 '2-3 60.40 1.9 1.7 intergenic CG8814 +,CG31694 - chr2L_5_2870001 chr2L_2870001 0.40 EF39_1-HE 11 chr2L 4118353 4118486 roo 407 8662 43 133 '28-15 67.73 7.3 5.2 intergenic not near genes chr2L_43_4115001 chr2L_4115001 0.65 EF39_1-HE 12 chr2L 4693092 4693253 roo 389 8664 44 161 '25-19 66.70 4.7 7.7 intergenic not near genes chr2L_44_4690001 chr2L_4690001 0.57 EF39_1-HE 13 chr2L 4735767 4735900 roo 8662 407 25 133 '13-12 67.54 2.9 6.4 exon CG15630 - chr2L_25_4735001 chr2L_4735001 0.52 EF39_1-HE 14 chr2L 5353809 5353937 flea 4756 5008 36 128 '16-20 67.81 5.8 5.3 intron nompC + chr2L_36_5350001 chr2L_5350001 0.44 EF39_1-HE 15 chr2L 5577874 5578001 opus 7492 111 19 127 '9-10 67.15 4.5 3.5 intergenic not near genes chr2L_19_5575001 chr2L_5575001 0.47 EF39_1-HE 16 chr2L 5758061 5758188 Stalker2 398 7249 38 127 '15-23 65.09 4.4 7.0 intron CG11030 + chr2L_38_5755001 chr2L_5755001 0.39 EF39_1-HE 17 chr2L 5851893 5851931 Doc 59 21 13 38 '6-7 63.09 8.2 1.4 intron TrissinR + chr2L_13_5850001 chr2L_5850001 0.46 EF39_1-HE 18 chr2L 5877073 5877192 invader3 5190 271 17 119 '8-9 63.58 2.3 5.2 intron rau - chr2L_17_5875001 chr2L_5875001 0.47 EF39_1-HE 19 chr2L 6079961 6080411 1360 3285 11 28 450 '1-27 65.35 3.8 5.8 5` UTR CR44773 + chr2L_28_6075001 chr2L_6075001 0.04 EF39_1-HE 20 chr2L 6184318 6184652 412 7221 1 28 334 '1-27 64.99 3.4 6.4 intron CG34380 + chr2L_28_6180001 chr2L_6180001 0.04 EF39_1-HE 21 chr2L 6533414 6533532 pogo 2099 11 9 118 '2-7 68.10 2.8 2.4 intron eya - chr2L_9_6530001 chr2L_6530001 0.22 EF39_1-HE 22 chr2L 6567098 6567218 gypsy12 5 10189 13 120 '7-6 61.22 5.0 2.2 intergenic not near genes chr2L_13_6565001 chr2L_6565001 0.54 EF39_1-HE 23 chr2L 6912087 6912455 1360 3 3232 25 368 '24-1 68.08 6.9 3.2 intron Wee1 - chr2L_25_6910001 chr2L_6910001 0.96 EF39_1-HE 24 chr2L 7113891 7114088 I-element 363 5346 10 197 '2-8 67.79 5.0 1.7 intron Pvf3 - chr2L_10_7110001 chr2L_7110001 0.20 EF39_1-HE 25 chr2L 7211869 7211918 jockey 4526 4982 10 49 '6-4 69.09 12.8 0.7 intron CG13784 - chr2L_10_7210001 chr2L_7210001 0.60 EF39_1-HE 26 chr2L 7469676 7469804 hobo 2708 3 20 128 '10-10 68.61 4.0 4.0 intron CG6055 + chr2L_20_7465001 chr2L_7465001 0.50 EF39_1-HE 27 chr2L 7546424 7546533 roo 23 408 30 109 '15-15 65.90 5.0 5.0 intron RapGAP1 - chr2L_30_7545001 chr2L_7545001 0.50 EF39_1-HE 28 chr2L 7680115 7680236 Transpac 5221 4924 29 121 '17-12 61.47 5.7 4.3 intron Myo28B1 + chr2L_29_7680001 chr2L_7680001 0.59 EF39_1-HE 29 chr2L 7723420 7723529 412 7 7536 11 109 '1-10 62.65 3.8 2.3 3` UTR CG13795 - chr2L_11_7720001 chr2L_7720001 0.09 EF39_1-HE 30 chr2L 7973117 7973250 roo 2 411 25 133 '5-20 63.45 5.0 4.2 intron Snoo - chr2L_25_7970001 chr2L_7970001 0.20 EF39_1-HE 31 chr2L 7991469 7991774 Tirant 115 8499 22 305 '1-21 65.91 7.6 2.6 exon pes - chr2L_22_7990001 chr2L_7990001 0.05 EF39_1-HE 32 chr2L 8009822 8009937 Juan 1 4206 9 115 '6-3 67.07 5.2 1.5 exon CG34010 - chr2L_9_8005001 chr2L_8005001 0.67 EF39_1-HE 33 chr2L 8959888 8960002 Ivk 5082 5367 8 114 '5-3 61.83 3.8 1.7 3` UTR CG9525 - chr2L_8_8955001 chr2L_8955001 0.62 EF39_1-HE 34 chr2L 9330451 9330576 pogo 2094 4 21 125 '9-12 69.46 3.9 4.3 intergenic CG17005 +,Cks30A + chr2L_21_9330001 chr2L_9330001 0.43 EF39_1-HE 35 chr2L 9365931 9366072 roo 409 8663 37 141 '27-10 63.66 5.1 6.1 intergenic not near genes chr2L_37_9365001 chr2L_9365001 0.73 EF39_1-HE 36 chr2L 9405009 9405100 flea 4770 226 16 91 '8-8 69.78 5.4 2.5 intron Shawl - chr2L_16_9405001 chr2L_9405001 0.50 EF39_1-HE 37 chr2L 9668167 9668294 1360 3 1 26 127 '14-12 67.36 4.5 4.7 intergenic not near genes chr2L_26_9665001 chr2L_9665001 0.54 EF39_1-HE 38 chr2L 9728275 9728665 412 7478 494 39 390 '1-38 65.09 9.7 3.6 intron Nckx30C - chr2L_39_9725001 chr2L_9725001 0.03 EF39_1-HE 39 chr2L 10028055 10028299 blood 357 455 32 244 '31-1 62.86 7.0 4.0 exon CG13127 + chr2L_32_10025001 chr2L_10025001 0.97 EF39_1-HE 40 chr2L 10132656 10132700 copia 3 47 10 44 '8-2 65.94 6.0 1.4 intron CG44153 - chr2L_10_10130001 chr2L_10130001 0.80 EF39_1-HE 41 chr2L 10154559 10154668 jockey 8 4982 14 109 '5-9 61.87 7.6 1.6 intron,intron CG44153 -,CG4839 + chr2L_14_10150001 chr2L_10150001 0.36 EF39_1-HE 42 chr2L 10183815 10183907 jockey 4687 4988 7 92 '5-2 61.76 3.8 1.5 intron Sur - chr2L_7_10180001 chr2L_10180001 0.71 EF39_1-HE 43 chr2L 10795486 10795537 G2 2824 2773 7 51 '3-4 63.55 5.7 1.0 intron CG31869 - chr2L_7_10795001 chr2L_10795001 0.43 EF39_1-HE 44 chr2L 10889961 10890052 I-element 5350 4 7 91 '1-6 59.01 1.1 3.3 intergenic not near genes chr2L_7_10885001 chr2L_10885001 0.14 EF39_1-HE 45 chr2L 10942272 10942401 Burdock 6390 6138 11 129 '4-7 66.79 2.9 2.8 intron dpr2 - chr2L_11_10940001 chr2L_10940001 0.36 EF39_1-HE 46 chr2L 11489576 11489623 412 7495 7542 10 47 '4-6 61.59 3.4 2.3 intergenic not near genes chr2L_10_11485001 chr2L_11485001 0.40 EF39_1-HE 47 chr2L 11532238 11532349 roo 8677 400 15 111 '5-10 65.24 4.0 3.0 exon,3` UTR CG34162 +,CR42743 - chr2L_15_11530001 chr2L_11530001 0.33 EF39_1-HE 48 chr2L 11573872 11573998 invader3 4 5460 9 126 '3-6 70.37 3.6 2.0 intergenic not near genes chr2L_9_11570001 chr2L_11570001 0.33 EF39_1-HE 49 chr2L 11640757 11640885 flea 4758 251 28 128 '10-18 64.38 6.8 3.6 intergenic not near genes chr2L_28_11640001 chr2L_11640001 0.36 EF39_1-HE 50 chr2L 11840507 11840545 I-element 5302 5340 4 38 '2-2 64.11 3.6 0.9 intron,3` UTR Pde1c -,CR43936 - chr2L_4_11840001 chr2L_11840001 0.50 EF39_1-HE 51 chr2L 12256264 12256484 1360 3276 1 20 220 '1-19 66.38 2.0 6.7 intron aret + chr2L_20_12255001 chr2L_12255001 0.05 EF39_1-HE 52 chr2L 12772384 12772469 hopper 44 4 13 85 '2-11 63.11 1.1 6.2 intergenic not near genes chr2L_13_12770001 chr2L_12770001 0.15 EF39_1-HE 53 chr2L 12776884 12776929 Doc 50 5 15 45 '9-6 68.67 13.2 1.1 intergenic not near genes chr2L_15_12775001 chr2L_12775001 0.60 EF39_1-HE 54 chr2L 12834808 12834929 hopper 8 1413 19 121 '4-15 65.86 4.9 3.2 intergenic not near genes chr2L_19_12830001 chr2L_12830001 0.21 EF39_1-HE 55 chr2L 12987816 12987911 hobo 2923 19 8 95 '4-4 57.68 0.0 8.0 intergenic not near genes chr2L_8_12985001 chr2L_12985001 0.50 EF39_1-HE 56 chr2L 13215631 13215736 jockey 14 4981 13 105 '6-7 64.52 3.6 2.8 intergenic snRNA:U2:34ABb +,snRNA:U2:34ABc +,kek4 - chr2L_13_13215001 chr2L_13215001 0.46 EF39_1-HE 57 chr2L 13333649 13333775 412 3 7542 31 126 '17-14 65.37 6.4 4.2 intergenic not near genes chr2L_31_13330001 chr2L_13330001 0.55 EF39_1-HE 58 chr2L 13511647 13511784 Tirant 8109 400 35 137 '20-15 66.23 9.4 3.4 intron B4 - chr2L_35_13510001 chr2L_13510001 0.57 EF39_1-HE 59 chr2L 13573063 13573161 FB 6 11 5 98 '1-4 56.24 0.8 2.8 intron kuz + chr2L_5_13570001 chr2L_13570001 0.20 EF39_1-HE 60 chr2L 13593178 13593229 jockey 11 62 9 51 '5-4 70.56 7.0 1.1 intron kuz + chr2L_9_13590001 chr2L_13590001 0.56 EF39_1-HE 61 chr2L 13598166 13598284 pogo 10 2093 16 118 '9-7 64.11 2.3 4.8 intron kuz + chr2L_16_13595001 chr2L_13595001 0.56 EF39_1-HE 62 chr2L 13603020 13603109 hopper 21 1391 11 89 '7-4 56.57 1.2 5.0 intron kuz + chr2L_11_13600001 chr2L_13600001 0.64 EF39_1-HE 63 chr2L 13701055 13701180 copia 2 250 18 125 '9-9 67.65 3.1 4.4 intron CG31814 - chr2L_18_13700001 chr2L_13700001 0.50 EF39_1-HE 64 chr2L 13730785 13730831 Juan 4161 4207 6 46 '2-4 69.81 2.3 1.8 intergenic not near genes chr2L_6_13730001 chr2L_13730001 0.33 EF39_1-HE 65 chr2L 13767948 13768073 Max-element 8236 8529 36 125 '31-5 65.27 5.7 5.4 intron TM9SF4 + chr2L_36_13765001 chr2L_13765001 0.86 EF39_1-HE 66 chr2L 14252310 14252404 jockey 4972 8 12 94 '7-5 62.63 4.8 2.1 intergenic not near genes chr2L_12_14250001 chr2L_14250001 0.58 EF39_1-HE 67 chr2L 14950193 14950222 Doc 59 30 20 29 '9-11 60.58 10.4 1.8 intron CG42313 - chr2L_20_14950001 chr2L_14950001 0.45 EF39_1-HE 68 chr2L 15106526 15106647 opus 4 489 24 121 '13-11 66.16 7.6 2.8 intergenic not near genes chr2L_24_15105001 chr2L_15105001 0.54 EF39_1-HE 69 chr2L 15142213 15142335 hopper 3 1407 25 122 '13-12 63.98 6.8 3.2 intergenic not near genes chr2L_25_15140001 chr2L_15140001 0.52 EF39_1-HE 70 chr2L 15146320 15146438 Juan 4205 4002 19 118 '4-15 66.70 5.8 2.8 intergenic not near genes chr2L_19_15145001 chr2L_15145001 0.21 EF39_1-HE 71 chr2L 15233612 15233724 hobo 7 2928 13 112 '8-5 68.18 4.7 2.3 intron ZnT35C - chr2L_13_15230001 chr2L_15230001 0.62 EF39_1-HE 72 chr2L 15234457 15234514 jockey 64 5 10 57 '3-7 71.88 6.2 1.4 intron ZnT35C - chr2L_10_15230001 chr2L_15230001 0.30 EF39_1-HE 73 chr2L 15320397 15320554 Burdock 6362 3 21 157 '14-7 65.50 4.9 3.6 intergenic not near genes chr2L_21_15320001 chr2L_15320001 0.67 EF39_1-HE 74 chr2L 15792081 15792203 hobo 2932 1 16 122 '14-2 63.20 7.7 1.8 intergenic not near genes chr2L_16_15790001 chr2L_15790001 0.88 EF39_1-HE 75 chr2L 16068374 16068494 copia 253 4878 20 120 '11-9 66.67 5.9 2.9 intron beat-Ia + chr2L_20_16065001 chr2L_16065001 0.55 EF39_1-HE 76 chr2L 16197430 16197549 invader3 4 268 24 119 '12-12 64.30 5.8 3.5 intergenic not near genes chr2L_24_16195001 chr2L_16195001 0.50 EF39_1-HE 77 chr2L 16227064 16227193 roo 409 4 26 129 '19-7 67.77 5.7 3.9 intergenic not near genes chr2L_26_16225001 chr2L_16225001 0.73 EF39_1-HE 78 chr2L 16250298 16250419 pogo 2 2088 9 121 '8-1 73.54 3.1 2.2 intron PRL-1 - chr2L_9_16250001 chr2L_16250001 0.89 EF39_1-HE 79 chr2L 16256969 16257081 pogo 15 2092 25 112 '10-15 63.31 5.3 4.0 intron PRL-1 - chr2L_25_16255001 chr2L_16255001 0.40 EF39_1-HE 80 chr2L 16330423 16330537 copia 244 4876 17 114 '8-9 66.70 2.9 4.4 3` UTR CG4440 + chr2L_17_16330001 chr2L_16330001 0.47 EF39_1-HE 81 chr2L 16551781 16551894 hobo 2937 14 23 113 '11-12 64.93 4.9 3.9 intron CG42389 + chr2L_23_16550001 chr2L_16550001 0.48 EF39_1-HE 82 chr2L 16971730 16971828 I-element 5332 2 35 98 '10-25 63.57 7.9 3.9 intergenic not near genes chr2L_35_16970001 chr2L_16970001 0.29 EF39_1-HE 83 chr2L 16975876 16975989 mdg1 7049 412 15 113 '7-8 61.76 3.8 3.1 intron beat-IIIb + chr2L_15_16975001 chr2L_16975001 0.47 EF39_1-HE 84 chr2L 17004741 17004861 Quasimodo 7358 3 9 120 '1-8 72.17 7.1 1.1 intergenic not near genes chr2L_9_17000001 chr2L_17000001 0.11 EF39_1-HE 85 chr2L 17048657 17048782 3S18 339 5771 31 125 '13-18 65.52 4.3 5.8 intergenic CG15136 - chr2L_31_17045001 chr2L_17045001 0.42 EF39_1-HE 86 chr2L 17197480 17197601 hobo 2935 4 35 121 '16-19 62.55 6.7 4.5 intron beat-IIIc - chr2L_35_17195001 chr2L_17195001 0.46 EF39_1-HE 87 chr2L 17296965 17297007 Juan 4068 4027 7 42 '4-3 63.03 2.5 2.0 intergenic not near genes chr2L_7_17295001 chr2L_17295001 0.57 EF39_1-HE 88 chr2L 17311054 17311177 S-element 1708 1712 6 123 '3-3 69.09 1.4 2.5 intergenic CG34170 - chr2L_6_17310001 chr2L_17310001 0.50 EF39_1-HE 89 chr2L 17322030 17322136 roo 407 25 18 106 '14-4 58.91 4.8 3.1 intergenic not near genes chr2L_18_17320001 chr2L_17320001 0.78 EF39_1-HE 90 chr2L 17363911 17364038 invader3 5459 2 23 127 '14-9 66.91 6.3 3.2 exon CG31804 + chr2L_23_17360001 chr2L_17360001 0.61 EF39_1-HE 91 chr2L 17626892 17627003 mdg1 7440 2 12 111 '8-4 66.25 3.3 2.8 intergenic not near genes chr2L_12_17625001 chr2L_17625001 0.67 EF39_1-HE 92 chr2L 17631056 17631189 copia 4869 256 14 133 '10-4 68.59 4.9 2.4 intergenic not near genes chr2L_14_17630001 chr2L_17630001 0.71 EF39_1-HE 93 chr2L 17729535 17729582 jockey 4805 4758 6 47 '2-4 64.21 1.1 2.9 intron CadN - chr2L_6_17725001 chr2L_17725001 0.33 EF39_1-HE 94 chr2L 17730824 17730939 hobo 11 2933 14 115 '12-2 64.93 2.6 3.9 intron CadN - chr2L_14_17730001 chr2L_17730001 0.86 EF39_1-HE 95 chr2L 17732800 17732898 hobo 2935 28 11 98 '3-8 69.05 2.1 3.5 intron CadN - chr2L_11_17730001 chr2L_17730001 0.27 EF39_1-HE 96 chr2L 17871959 17872087 mdg3 246 5256 26 128 '18-8 64.11 5.2 4.2 intron CadN2 - chr2L_26_17870001 chr2L_17870001 0.69 EF39_1-HE 97 chr2L 17884312 17884367 G2 2845 2900 19 55 '12-7 65.91 7.9 2.1 intergenic not near genes chr2L_19_17880001 chr2L_17880001 0.63 EF39_1-HE 98 chr2L 18077953 18078003 G2 2829 2779 12 50 '6-6 61.52 3.0 3.0 intergenic Arr1 + chr2L_12_18075001 chr2L_18075001 0.50 EF39_1-HE 99 chr2L 18213162 18213317 hobo 8 21 38 155 '24-14 64.50 7.8 4.3 intron CG42750 - chr2L_38_18210001 chr2L_18210001 0.63 EF39_1-HE 100 chr2L 18568353 18568474 pogo 2088 6 25 121 '5-20 62.57 5.0 4.2 intron Pde11 - chr2L_25_18565001 chr2L_18565001 0.20 EF39_1-HE 101 chr2L 18643912 18643968 Doc 59 3 22 56 '13-9 63.95 12.7 1.6 intron MESR3 + chr2L_22_18640001 chr2L_18640001 0.59 EF39_1-HE 102 chr2L 18704541 18704671 pogo 21 57 13 130 '4-9 64.49 3.1 3.2 intergenic Jwa -,CG10343 + chr2L_13_18700001 chr2L_18700001 0.31 EF39_1-HE 103 chr2L 18945241 18945332 Juan 4033 4196 8 91 '5-3 62.01 2.8 2.1 intergenic CR44740 + chr2L_8_18945001 chr2L_18945001 0.62 EF39_1-HE 104 chr2L 19285260 19285514 412 489 7446 14 254 '13-1 64.83 3.7 3.0 intergenic not near genes chr2L_14_19285001 chr2L_19285001 0.93 EF39_1-HE 105 chr2L 19333655 19333728 roo 49 399 6 73 '1-5 66.78 2.5 1.7 intergenic not near genes chr2L_6_19330001 chr2L_19330001 0.17 EF39_1-HE 106 chr2L 19416979 19417108 hopper 2 1413 23 129 '16-7 65.53 4.2 4.4 intron Pax - chr2L_23_19415001 chr2L_19415001 0.70 EF39_1-HE 107 chr2L 19680976 19681091 hobo 6 2930 31 115 '21-10 66.94 5.8 4.6 intron Lar + chr2L_31_19680001 chr2L_19680001 0.68 EF39_1-HE 108 chr2L 19898076 19898107 Doc 32 63 16 31 '10-6 61.41 12.2 1.2 intron sick + chr2L_16_19895001 chr2L_19895001 0.62 EF39_1-HE 109 chr2L 20228201 20228233 hopper 1378 1410 4 32 '2-2 62.88 2.2 1.2 intergenic not near genes chr2L_4_20225001 chr2L_20225001 0.50 EF39_1-HE 110 chr2L 20238249 20238385 mdg1 7044 7459 22 136 '9-13 65.91 0.8 12.2 intergenic not near genes chr2L_22_20235001 chr2L_20235001 0.41 EF39_1-HE 111 chr2L 20254743 20254792 F-element 11 51 13 49 '8-5 60.98 10.0 1.2 intergenic CR40465 - chr2L_13_20250001 chr2L_20250001 0.62 EF39_1-HE 112 chr2L 20287438 20287561 hobo 5 2937 46 123 '22-24 67.41 7.0 5.8 intergenic not near genes chr2L_46_20285001 chr2L_20285001 0.48 EF39_1-HE 113 chr2L 20506383 20506507 412 494 10 20 124 '12-8 63.52 6.5 2.7 intergenic not near genes chr2L_20_20505001 chr2L_20505001 0.60 EF39_1-HE 114 chr2L 20648696 20648736 412 7110 7070 9 40 '4-5 61.79 1.6 3.5 intron Uhg3 + chr2L_9_20645001 chr2L_20645001 0.44 EF39_1-HE 115 chr2L 20862348 20862452 transib2 2818 23 8 104 '4-4 64.98 3.8 1.7 intergenic not near genes chr2L_8_20860001 chr2L_20860001 0.50 EF39_1-HE 116 chr2L 20881391 20881517 1360 2 3 32 126 '20-12 65.45 6.6 4.2 intron,intron CG43739 -,sky - chr2L_32_20880001 chr2L_20880001 0.62 EF39_1-HE 117 chr2L 21049399 21049508 FB 12 3 11 109 '3-8 60.82 0.9 5.8 intron CG42238 - chr2L_11_21045001 chr2L_21045001 0.27 EF39_1-HE 118 chr2L 21074928 21074959 BS 5079 5049 10 31 '4-6 63.30 8.5 1.1 intergenic tadr + chr2L_10_21070001 chr2L_21070001 0.40 EF39_1-HE 119 chr2L 21332432 21332538 BS 5078 5058 7 106 '4-3 58.42 4.7 1.2 intron dimm + chr2L_7_21330001 chr2L_21330001 0.57 EF39_1-HE 120 chr2L 21400731 21400811 Doc3-element 64 4715 4 80 '2-2 51.48 5.4 0.6 intergenic not near genes chr2L_4_21400001 chr2L_21400001 0.50 EF39_1-HE 121 chr2L 21687112 21687160 mariner2 841 889 7 48 '4-3 68.26 2.8 1.8 intron CG31619 + chr2L_7_21685001 chr2L_21685001 0.57 EF39_1-HE 122 chr2L 21909583 21909715 1731 316 4313 28 132 '20-8 67.42 7.7 3.2 intergenic not near genes chr2L_28_21905001 chr2L_21905001 0.71 EF39_1-HE 123 chr2L 22198328 22198420 HMS-Beagle 3 7003 26 92 '15-11 67.65 7.1 3.2 intron Ir40a - chr2L_26_22195001 chr2L_22195001 0.58 EF39_1-HE 124 chr2L 22214890 22214942 blood 7337 374 14 52 '8-6 62.88 23.2 0.6 intergenic not near genes chr2L_14_22210001 chr2L_22210001 0.57 EF39_1-HE 125 chr2L 22217433 22217518 Quasimodo 11 7329 8 85 '7-1 68.67 18.5 0.4 intergenic not near genes chr2L_8_22215001 chr2L_22215001 0.88 EF39_1-HE 126 chr2L 22546202 22546329 pogo 2099 7 24 127 '13-11 64.03 4.5 4.4 intron CG17490 + chr2L_24_22545001 chr2L_22545001 0.54 EF39_1-HE 127 chr2L 22780830 22780951 HMS-Beagle2 301 6885 13 121 '3-10 67.63 1.8 4.6 intergenic not near genes chr2L_13_22780001 chr2L_22780001 0.23 EF39_1-HE 128 chr2L 23295810 23295886 micropia 407 8 11 76 '5-6 66.05 4.6 2.0 intergenic not near genes chr2L_11_23295001 chr2L_23295001 0.45 EF39_1-HE 129 chr2L 23313640 23313769 S-element 2 1707 4 129 '3-1 73.02 2.0 1.3 intergenic CG40042 - chr2L_4_23310001 chr2L_23310001 0.75 EF39_1-HE 130 chr2R 603613 603656 F-element 175 132 16 43 '6-10 61.65 13.3 1.1 intron CG40378 + chr2R_16_600001 chr2R_600001 0.38 EF39_1-HE 131 chr2R 1076510 1076557 FB 246 293 15 47 '6-9 62.29 1.4 6.2 intron rl + chr2R_15_1075001 chr2R_1075001 0.40 EF39_1-HE 132 chr2R 1983256 1983311 G-element 8 63 25 55 '15-10 65.10 11.8 2.0 intron CG17684 - chr2R_25_1980001 chr2R_1980001 0.60 EF39_1-HE 133 chr2R 2048591 2048719 Tc3 1646 1711 8 128 '5-3 69.87 6.1 1.1 intron CG17684 - chr2R_8_2045001 chr2R_2045001 0.62 EF39_1-HE 134 chr2R 2122605 2122644 Tirant 5 8150 30 39 '16-14 67.39 47.1 0.6 intron CG17684 - chr2R_30_2120001 chr2R_2120001 0.53 EF39_1-HE 135 chr2R 2879431 2879475 Stalker 88 132 8 44 '1-7 57.55 20.6 0.4 intergenic not near genes chr2R_8_2875001 chr2R_2875001 0.12 EF39_1-HE 136 chr2R 3106177 3106216 G2 2637 2896 6 39 '3-3 60.89 5.8 0.9 intron CG42596 + chr2R_6_3105001 chr2R_3105001 0.50 EF39_1-HE 137 chr2R 4260467 4260496 1360 2 31 11 29 '5-6 62.20 10.4 1.0 intergenic not near genes chr2R_11_4260001 chr2R_4260001 0.45 EF39_1-HE 138 chr2R 4339481 4339517 G5A 2756 2792 6 36 '3-3 80.36 7.5 0.7 intron Gprk1 - chr2R_6_4335001 chr2R_4335001 0.50 EF39_1-HE 139 chr2R 5179562 5179673 1360 3385 16 19 111 '12-7 67.52 6.4 2.6 intron Nipped-A - chr2R_19_5175001 chr2R_5175001 0.63 EF39_1-HE 140 chr2R 5200856 5201023 1360 3339 3380 20 167 '14-6 64.22 2.6 5.6 intron Nipped-A - chr2R_20_5200001 chr2R_5200001 0.70 EF39_1-HE 141 chr2R 5303987 5304115 roo 4 408 19 128 '6-13 66.08 2.8 5.0 intergenic not near genes chr2R_19_5300001 chr2R_5300001 0.32 EF39_1-HE 142 chr2R 5486130 5486162 transib2 27 59 7 32 '4-3 55.45 6.5 0.9 intron CG30440 - chr2R_7_5485001 chr2R_5485001 0.57 EF39_1-HE 143 chr2R 5648648 5648916 Bari1 1668 1680 14 268 '13-1 67.05 3.2 3.3 intron CG11665 - chr2R_14_5645001 chr2R_5645001 0.93 EF39_1-HE 144 chr2R 5756310 5756433 opus 7 494 12 123 '6-6 64.94 4.5 2.2 3` UTR l(2)09851 + chr2R_12_5755001 chr2R_5755001 0.50 EF39_1-HE 145 chr2R 5969147 5969266 pogo 9 2093 14 119 '4-10 65.48 4.1 2.7 3` UTR BubR1 - chr2R_14_5965001 chr2R_5965001 0.29 EF39_1-HE 146 chr2R 6085998 6086183 1360 248 16 4 185 '3-1 77.23 3.6 0.9 intergenic Ars2 - chr2R_4_6085001 chr2R_6085001 0.75 EF39_1-HE 147 chr2R 6271494 6271588 Burdock 247 6168 7 94 '3-4 67.19 16.2 0.4 intergenic not near genes chr2R_7_6270001 chr2R_6270001 0.43 EF39_1-HE 148 chr2R 6488152 6488223 pogo 36 2090 9 71 '1-8 62.68 4.5 1.6 intergenic not near genes chr2R_9_6485001 chr2R_6485001 0.11 EF39_1-HE 149 chr2R 6529413 6529532 I-element 1 5350 36 119 '30-6 62.69 8.5 3.8 intron jing + chr2R_36_6525001 chr2R_6525001 0.83 EF39_1-HE 150 chr2R 6868111 6868229 opus 7115 7494 18 118 '6-12 65.02 4.4 3.3 intron coro - chr2R_18_6865001 chr2R_6865001 0.33 EF39_1-HE 151 chr2R 7047302 7047431 roo 405 8749 21 129 '12-9 64.27 4.7 3.7 exon Tsp42El + chr2R_21_7045001 chr2R_7045001 0.57 EF39_1-HE 152 chr2R 7103703 7103827 1360 5 3387 37 124 '20-17 65.38 6.9 4.7 intron esn + chr2R_37_7100001 chr2R_7100001 0.54 EF39_1-HE 153 chr2R 7302391 7302509 Tirant 8107 8488 21 118 '15-6 67.67 5.5 3.2 intergenic not near genes chr2R_21_7300001 chr2R_7300001 0.71 EF39_1-HE 154 chr2R 7605064 7605114 jockey 66 13 11 50 '5-6 66.41 7.4 1.3 intron CG1358 - chr2R_11_7605001 chr2R_7605001 0.45 EF39_1-HE 155 chr2R 7678583 7678709 Bari1 5 1702 22 126 '7-15 66.15 3.6 4.8 exon CG1399 - chr2R_22_7675001 chr2R_7675001 0.32 EF39_1-HE 156 chr2R 7727729 7727845 roo 412 25 30 116 '22-8 66.23 6.8 3.8 intron CG18812 - chr2R_30_7725001 chr2R_7725001 0.73 EF39_1-HE 157 chr2R 8151628 8151755 pogo 2094 2 19 127 '8-11 67.62 4.1 3.7 intron,intron Lpin -,kermit - chr2R_19_8150001 chr2R_8150001 0.42 EF39_1-HE 158 chr2R 8208371 8208476 roo 8666 9046 17 105 '7-10 67.58 4.2 3.3 intron LRP1 + chr2R_17_8205001 chr2R_8205001 0.41 EF39_1-HE 159 chr2R 8280375 8280499 Quasimodo 7 7364 10 124 '5-5 66.54 7.3 1.2 intergenic not near genes chr2R_10_8280001 chr2R_8280001 0.50 EF39_1-HE 160 chr2R 8601746 8601859 297 6958 6585 13 113 '6-7 69.09 4.7 2.3 intron rgr + chr2R_13_8600001 chr2R_8600001 0.46 EF39_1-HE 161 chr2R 8642881 8642995 Doc2-element 4761 4691 15 114 '7-8 61.32 2.5 4.3 intergenic not near genes chr2R_15_8640001 chr2R_8640001 0.47 EF39_1-HE 162 chr2R 8677185 8677307 pogo 2100 13 21 122 '13-8 67.68 4.6 3.8 intron Acsl + chr2R_21_8675001 chr2R_8675001 0.62 EF39_1-HE 163 chr2R 8941326 8941366 412 7101 8 10 40 '6-4 66.64 2.5 2.9 intergenic CG13748 +,CR44273 + chr2R_10_8940001 chr2R_8940001 0.60 EF39_1-HE 164 chr2R 9218259 9218387 mdg1 7457 7042 11 128 '7-4 65.44 3.7 2.3 intergenic not near genes chr2R_11_9215001 chr2R_9215001 0.64 EF39_1-HE 165 chr2R 9445110 9445239 diver 221 5888 15 129 '8-7 66.60 6.4 2.0 intergenic ced-6 -,CR45321 - chr2R_15_9445001 chr2R_9445001 0.53 EF39_1-HE 166 chr2R 9538767 9538889 roo 400 8666 21 122 '11-10 66.75 3.7 4.5 3` UTR brp + chr2R_21_9535001 chr2R_9535001 0.52 EF39_1-HE 167 chr2R 9610957 9611009 jockey 4814 4762 9 52 '3-6 62.49 4.8 1.6 5` UTR CR44069 + chr2R_9_9610001 chr2R_9610001 0.33 EF39_1-HE 168 chr2R 9870845 9870944 roo 22 9067 26 99 '9-17 68.01 6.4 3.5 intron cbx - chr2R_26_9870001 chr2R_9870001 0.35 EF39_1-HE 169 chr2R 9950669 9950791 S-element 6 8 12 122 '8-4 67.83 2.5 3.4 intron Mef2 - chr2R_12_9950001 chr2R_9950001 0.67 EF39_1-HE 170 chr2R 10153718 10153836 1360 3381 5 28 118 '13-15 68.11 7.4 3.3 intron,5` UTR KCNQ -,CR45133 + chr2R_28_10150001 chr2R_10150001 0.46 EF39_1-HE 171 chr2R 10371963 10372048 roo 9 9033 17 85 '9-8 69.37 3.3 4.0 intron CG42732 - chr2R_17_10370001 chr2R_10370001 0.53 EF39_1-HE 172 chr2R 10423631 10423751 1360 4 3383 7 120 '4-3 71.01 3.6 1.5 5` UTR CG11825 - chr2R_7_10420001 chr2R_10420001 0.57 EF39_1-HE 173 chr2R 10670396 10670477 Stalker4 7002 408 11 81 '3-8 69.03 3.7 2.3 intergenic not near genes chr2R_11_10670001 chr2R_10670001 0.27 EF39_1-HE 174 chr2R 10920608 10920784 X-element 4416 5 16 176 '1-15 63.32 4.9 2.7 intergenic not near genes chr2R_16_10920001 chr2R_10920001 0.06 EF39_1-HE 175 chr2R 10985097 10985198 I-element 4 5323 9 101 '5-4 54.02 4.2 1.7 intron luna - chr2R_9_10985001 chr2R_10985001 0.56 EF39_1-HE 176 chr2R 11203313 11203444 Tirant 8107 399 38 131 '30-8 67.89 11.9 2.9 intron shn + chr2R_38_11200001 chr2R_11200001 0.79 EF39_1-HE 177 chr2R 11379762 11379807 jockey 4723 4678 4 45 '2-2 64.85 1.5 1.6 intergenic not near genes chr2R_4_11375001 chr2R_11375001 0.50 EF39_1-HE 178 chr2R 11415254 11415381 roo 408 8670 25 127 '16-9 63.88 7.3 3.0 intron,exon Drip -,CG7763 + chr2R_25_11415001 chr2R_11415001 0.64 EF39_1-HE 179 chr2R 11943919 11944050 pogo 1 2097 21 131 '12-9 66.59 4.9 3.6 intron CG13188 + chr2R_21_11940001 chr2R_11940001 0.57 EF39_1-HE 180 chr2R 11997531 11997574 P-element 2829 2874 8 43 '5-3 40.69 7.0 1.0 intergenic not near genes chr2R_8_11995001 chr2R_11995001 0.62 EF39_1-HE 181 chr2R 12185308 12185421 accord 7376 13 15 113 '13-2 66.37 7.8 1.7 3` UTR,3` UTR CG13175 +,CG33964 + chr2R_15_12185001 chr2R_12185001 0.87 EF39_1-HE 182 chr2R 12253291 12253338 BS 4690 4643 10 47 '9-1 66.14 0.0 10.0 intergenic not near genes chr2R_10_12250001 chr2R_12250001 0.90 EF39_1-HE 183 chr2R 12365055 12365137 1360 3342 3387 15 82 '3-12 63.61 3.6 3.3 intergenic not near genes chr2R_15_12365001 chr2R_12365001 0.20 EF39_1-HE 184 chr2R 12837811 12837930 hobo 6 232 45 119 '20-25 61.18 6.8 5.8 intergenic not near genes chr2R_45_12835001 chr2R_12835001 0.44 EF39_1-HE 185 chr2R 13242335 13242384 297 2 51 16 49 '11-5 67.14 4.7 2.8 intergenic not near genes chr2R_16_13240001 chr2R_13240001 0.69 EF39_1-HE 186 chr2R 13248689 13248800 Quasimodo 7363 11 10 111 '3-7 68.81 3.4 2.3 intron Mp20 + chr2R_10_13245001 chr2R_13245001 0.30 EF39_1-HE 187 chr2R 13305581 13305620 hobo 43 4 12 39 '6-6 64.77 2.6 3.3 intergenic not near genes chr2R_12_13305001 chr2R_13305001 0.50 EF39_1-HE 188 chr2R 13500380 13500489 FB 6 14 11 109 '8-3 69.04 1.4 4.6 intron drk - chr2R_11_13500001 chr2R_13500001 0.73 EF39_1-HE 189 chr2R 13558050 13558130 P-element 2877 2847 19 80 '11-8 37.39 4.7 3.3 3` UTR snoRNA:2R:9445410 - chr2R_19_13555001 chr2R_13555001 0.58 EF39_1-HE 190 chr2R 13677273 13677386 hobo 13 2938 18 113 '8-10 65.07 3.2 4.3 intron fas + chr2R_18_13675001 chr2R_13675001 0.44 EF39_1-HE 191 chr2R 13687825 13687942 Quasimodo 7366 16 9 117 '3-6 69.24 7.3 1.1 intron fas + chr2R_9_13685001 chr2R_13685001 0.33 EF39_1-HE 192 chr2R 13695402 13695515 412 481 7 25 113 '9-16 62.30 5.9 3.6 intron fas + chr2R_25_13695001 chr2R_13695001 0.36 EF39_1-HE 193 chr2R 13805677 13805768 Ivk 5354 5315 19 91 '7-12 65.44 6.3 2.6 intergenic stj +,Cpr50Cb + chr2R_19_13805001 chr2R_13805001 0.37 EF39_1-HE 194 chr2R 14001567 14001696 flea 4758 252 28 129 '11-17 66.99 4.1 5.5 intron mam + chr2R_28_14000001 chr2R_14000001 0.39 EF39_1-HE 195 chr2R 14281786 14281817 hobo 49 2889 9 31 '3-6 75.25 5.9 1.3 intron Ih + chr2R_9_14280001 chr2R_14280001 0.33 EF39_1-HE 196 chr2R 14442592 14442620 hobo 3 31 14 28 '7-7 60.70 18.0 0.7 exon Oaz + chr2R_14_14440001 chr2R_14440001 0.50 EF39_1-HE 197 chr2R 14579403 14579441 jockey 20 59 11 38 '8-3 63.86 9.2 1.1 intron ttv + chr2R_11_14575001 chr2R_14575001 0.73 EF39_1-HE 198 chr2R 14683913 14684009 1360 16 3370 23 96 '13-10 65.82 8.6 2.4 intron mspo - chr2R_23_14680001 chr2R_14680001 0.57 EF39_1-HE 199 chr2R 15003899 15004019 hobo 4 2933 26 120 '12-14 64.68 3.9 5.3 intergenic not near genes chr2R_26_15000001 chr2R_15000001 0.46 EF39_1-HE 200 chr2R 15158438 15158563 invader3 5 276 32 125 '13-19 64.83 4.7 5.6 intron igl + chr2R_32_15155001 chr2R_15155001 0.41 EF39_1-HE 201 chr2R 16321056 16321163 pogo 2082 10 10 107 '3-7 65.02 1.7 3.7 3` UTR CG30096 - chr2R_10_16320001 chr2R_16320001 0.30 EF39_1-HE 202 chr2R 16411355 16411484 Tabor 1 484 12 129 '11-1 59.62 7.4 1.4 intron Sema-2b + chr2R_12_16410001 chr2R_16410001 0.92 EF39_1-HE 203 chr2R 16927134 16927230 hopper 1412 34 18 96 '15-3 64.31 4.4 3.3 intron Pkc53E + chr2R_18_16925001 chr2R_16925001 0.83 EF39_1-HE 204 chr2R 17011498 17011613 flea 4763 5002 29 115 '10-19 69.49 7.0 3.6 exon Ehbp1 - chr2R_29_17010001 chr2R_17010001 0.34 EF39_1-HE 205 chr2R 17111317 17111442 1360 1 5 19 125 '9-10 68.40 3.8 4.0 intron CG15611 + chr2R_19_17110001 chr2R_17110001 0.47 EF39_1-HE 206 chr2R 17168439 17168559 hobo 2599 5 14 120 '8-6 64.31 2.5 4.0 intergenic not near genes chr2R_14_17165001 chr2R_17165001 0.57 EF39_1-HE 207 chr2R 17206307 17206462 hobo 4 2565 20 155 '15-5 64.90 6.2 2.8 intergenic not near genes chr2R_20_17205001 chr2R_17205001 0.75 EF39_1-HE 208 chr2R 17300204 17300327 invader3 8 275 34 123 '10-24 64.50 6.7 4.4 intron mbl + chr2R_34_17300001 chr2R_17300001 0.29 EF39_1-HE 209 chr2R 17344930 17345052 hobo 2933 2 17 122 '12-5 63.33 8.0 1.9 intron mbl + chr2R_17_17340001 chr2R_17340001 0.71 EF39_1-HE 210 chr2R 17390945 17391043 invader3 273 31 25 98 '19-6 65.39 5.0 4.2 intergenic not near genes chr2R_25_17390001 chr2R_17390001 0.76 EF39_1-HE 211 chr2R 17402689 17402815 invader4 2765 324 21 126 '7-14 66.73 4.0 4.2 intron Sip1 + chr2R_21_17400001 chr2R_17400001 0.33 EF39_1-HE 212 chr2R 17437135 17437421 mdg3 5255 5254 30 286 '1-29 65.12 7.8 3.4 intron EDTP - chr2R_30_17435001 chr2R_17435001 0.03 EF39_1-HE 213 chr2R 17484577 17484705 Burdock 6138 6388 17 128 '5-12 63.68 3.2 4.0 5` UTR CG43110 - chr2R_17_17480001 chr2R_17480001 0.29 EF39_1-HE 214 chr2R 17636376 17636499 roo 9071 1 20 123 '18-2 66.54 3.3 4.7 intron CG10936 - chr2R_20_17635001 chr2R_17635001 0.90 EF39_1-HE 215 chr2R 17649927 17650045 1360 3381 5 18 118 '11-7 61.89 2.4 5.3 intron CCHa1-R - chr2R_18_17645001 chr2R_17645001 0.61 EF39_1-HE 216 chr2R 17734526 17734575 Stalker4 370 419 24 49 '9-15 63.75 19.2 1.2 3` UTR CG6406 - chr2R_24_17730001 chr2R_17730001 0.38 EF39_1-HE 217 chr2R 17876351 17876434 jockey 4963 4759 17 83 '7-10 68.68 4.2 3.3 intron Elk + chr2R_17_17875001 chr2R_17875001 0.41 EF39_1-HE 218 chr2R 17977405 17977460 invader4 3031 327 30 55 '17-13 69.31 10.0 2.7 intron dpr13 - chr2R_30_17975001 chr2R_17975001 0.57 EF39_1-HE 219 chr2R 18290608 18290738 pogo 3 2098 31 130 '19-12 66.16 3.4 7.0 intron,intron sbb -,CG14502 + chr2R_31_18290001 chr2R_18290001 0.61 EF39_1-HE 220 chr2R 18393255 18393363 roo 24 408 12 108 '5-7 70.65 2.3 3.6 intergenic Idgf5 + chr2R_12_18390001 chr2R_18390001 0.42 EF39_1-HE 221 chr2R 18649378 18649503 flea 250 4756 20 125 '12-8 58.96 4.5 3.6 intron SP2637 - chr2R_20_18645001 chr2R_18645001 0.60 EF39_1-HE 222 chr2R 18764840 18764957 flea 255 4768 20 117 '9-11 64.53 6.0 2.9 intron Mctp + chr2R_20_18760001 chr2R_18760001 0.45 EF39_1-HE 223 chr2R 19052036 19052148 mdg1 7457 7050 24 112 '21-3 66.45 6.2 3.3 intergenic not near genes chr2R_24_19050001 chr2R_19050001 0.88 EF39_1-HE 224 chr2R 19083761 19083874 hobo 7 2931 9 113 '2-7 65.37 5.0 1.5 intron 5-HT1A + chr2R_9_19080001 chr2R_19080001 0.22 EF39_1-HE 225 chr2R 19185525 19185633 FB 16 4 6 108 '2-4 67.93 0.8 3.3 intron hppy + chr2R_6_19185001 chr2R_19185001 0.33 EF39_1-HE 226 chr2R 19296360 19296481 pogo 6 8 11 121 '4-7 65.23 3.8 2.3 intron Tab2 + chr2R_11_19295001 chr2R_19295001 0.36 EF39_1-HE 227 chr2R 19535044 19535170 412 3 491 36 126 '29-7 65.64 4.3 6.8 intron sm - chr2R_36_19535001 chr2R_19535001 0.81 EF39_1-HE 228 chr2R 19560146 19560197 hopper 1362 2 15 51 '5-10 66.03 1.9 5.2 intron sm - chr2R_15_19560001 chr2R_19560001 0.33 EF39_1-HE 229 chr2R 20142486 20142604 pogo 14 2097 13 118 '8-5 64.69 3.8 2.7 intergenic not near genes chr2R_13_20140001 chr2R_20140001 0.62 EF39_1-HE 230 chr2R 20360146 20360244 hobo 2915 8 21 98 '7-14 63.47 1.8 7.5 intergenic not near genes chr2R_21_20360001 chr2R_20360001 0.33 EF39_1-HE 231 chr2R 20506839 20506960 flea 4758 5003 23 121 '16-7 63.20 3.3 5.3 5` UTR CR44645 + chr2R_23_20505001 chr2R_20505001 0.70 EF39_1-HE 232 chr2R 20570217 20570312 FB 7 27 4 95 '3-1 65.25 4.7 0.7 intron qsm - chr2R_4_20570001 chr2R_20570001 0.75 EF39_1-HE 233 chr2R 20813823 20813935 hobo 2928 8 15 112 '4-11 61.64 4.7 2.6 intergenic not near genes chr2R_15_20810001 chr2R_20810001 0.27 EF39_1-HE 234 chr2R 20877278 20877382 roo 404 24 18 104 '14-4 66.27 4.1 3.5 exon Ipk1 + chr2R_18_20875001 chr2R_20875001 0.78 EF39_1-HE 235 chr2R 20966653 20966761 hobo 10 2928 23 108 '13-10 65.41 4.3 4.3 intergenic not near genes chr2R_23_20965001 chr2R_20965001 0.57 EF39_1-HE 236 chr2R 21280675 21280798 opus 7 7498 7 123 '4-3 67.05 3.7 1.5 3` UTR Rgk3 + chr2R_7_21280001 chr2R_21280001 0.57 EF39_1-HE 237 chr2R 21379450 21379505 P-element 2885 2830 13 55 '8-5 52.86 8.7 1.3 5` UTR cv-2 - chr2R_13_21375001 chr2R_21375001 0.62 EF39_1-HE 238 chr2R 21474137 21474318 Tirant 2 96 35 181 '27-8 66.61 4.8 6.0 intron Sdc - chr2R_35_21470001 chr2R_21470001 0.77 EF39_1-HE 239 chr2R 21911237 21911372 blood 7012 380 33 135 '27-6 65.78 7.8 3.7 intron Fili + chr2R_33_21910001 chr2R_21910001 0.82 EF39_1-HE 240 chr2R 22037750 22037880 roo 8663 405 30 130 '10-20 63.09 5.0 5.0 intron CG34370 - chr2R_30_22035001 chr2R_22035001 0.33 EF39_1-HE 241 chr2R 22524070 22524358 opus 7058 148 9 288 '1-8 60.37 8.0 1.0 intron px - chr2R_9_22520001 chr2R_22520001 0.11 EF39_1-HE 242 chr2R 22613956 22614086 hobo 2709 1 25 130 '11-14 62.82 4.3 4.7 intergenic CG33143 + chr2R_25_22610001 chr2R_22610001 0.44 EF39_1-HE 243 chr2R 23072135 23072253 pogo 10 8 6 118 '4-2 67.00 1.6 2.3 intergenic l(2)k09913 + chr2R_6_23070001 chr2R_23070001 0.67 EF39_1-HE 244 chr2R 23259810 23259919 Juan 4202 4025 12 109 '3-9 62.68 5.5 1.8 intergenic not near genes chr2R_12_23255001 chr2R_23255001 0.25 EF39_1-HE 245 chr2R 23658042 23658165 hobo 6 2938 20 123 '11-9 63.99 6.6 2.6 intergenic not near genes chr2R_20_23655001 chr2R_23655001 0.55 EF39_1-HE 246 chr2R 24216296 24216420 Stalker4 2 402 33 124 '7-26 65.18 9.0 3.3 intron CG30419 - chr2R_33_24215001 chr2R_24215001 0.21 EF39_1-HE 247 chr2R 24216298 24216377 Stalker 6853 7208 8 79 '6-2 68.20 8.2 0.9 intron CG30419 - chr2R_8_24215001 chr2R_24215001 0.75 EF39_1-HE 248 chr2R 24555637 24555720 hopper 19 1410 12 83 '6-6 70.23 2.5 3.4 intron,intron CG4622 -,ITP + chr2R_12_24555001 chr2R_24555001 0.50 EF39_1-HE 249 chr2R 25203747 25203794 1360 9 3333 17 47 '7-10 64.14 8.3 1.8 intron CG9380 - chr2R_17_25200001 chr2R_25200001 0.41 EF39_1-HE 250 chr3L 153552 153920 1360 3387 3351 36 368 '35-1 62.86 5.1 5.9 intron p130CAS + chr3L_36_150001 chr3L_150001 0.97 EF39_1-HE 251 chr3L 746969 747063 Bica 337 337 4 94 '1-3 75.67 3.9 0.8 intron hng3 - chr3L_4_745001 chr3L_745001 0.25 EF39_1-HE 252 chr3L 1123150 1123250 blood 7009 342 26 100 '19-7 67.48 10.1 2.3 intergenic not near genes chr3L_26_1120001 chr3L_1120001 0.73 EF39_1-HE 253 chr3L 1256006 1256132 297 3 395 25 126 '13-12 68.77 1.6 9.6 intergenic CG9130 +,CG9133 +,CG9134 + chr3L_25_1255001 chr3L_1255001 0.52 EF39_1-HE 254 chr3L 1258166 1258303 roo 36 411 18 137 '4-14 69.56 1.0 9.0 intron CG9134 + chr3L_18_1255001 chr3L_1255001 0.22 EF39_1-HE 255 chr3L 1580706 1580798 opus 495 38 19 92 '16-3 63.96 4.0 3.8 intron CG13917 + chr3L_19_1580001 chr3L_1580001 0.84 EF39_1-HE 256 chr3L 1854378 1854433 jockey 4672 4698 7 55 '5-2 63.64 6.2 1.0 intron CG13936 - chr3L_7_1850001 chr3L_1850001 0.71 EF39_1-HE 257 chr3L 2106895 2107018 pogo 2090 2 9 123 '4-5 65.53 3.4 2.0 intron sls - chr3L_9_2105001 chr3L_2105001 0.44 EF39_1-HE 258 chr3L 2144663 2144787 mdg3 5255 5491 18 124 '8-10 63.38 5.4 2.8 intron zormin - chr3L_18_2140001 chr3L_2140001 0.44 EF39_1-HE 259 chr3L 2416899 2417019 roo 397 8665 21 120 '10-11 64.97 3.4 4.8 intron CG45186 + chr3L_21_2415001 chr3L_2415001 0.48 EF39_1-HE 260 chr3L 2702884 2702930 G6 11 57 20 46 '7-13 63.60 9.9 1.8 intron Fife - chr3L_20_2700001 chr3L_2700001 0.35 EF39_1-HE 261 chr3L 2889392 2889524 Stalker2 7246 401 21 132 '12-9 65.06 8.1 2.3 intron spz5 - chr3L_21_2885001 chr3L_2885001 0.57 EF39_1-HE 262 chr3L 3345111 3345196 FB 16 28 4 85 '1-3 64.50 1.7 1.5 intron kst + chr3L_4_3345001 chr3L_3345001 0.25 EF39_1-HE 263 chr3L 3822399 3822524 S-element 7 4 12 125 '5-7 66.59 2.2 3.8 intron enc + chr3L_12_3820001 chr3L_3820001 0.42 EF39_1-HE 264 chr3L 3849327 3849436 copia 4880 245 14 109 '8-6 60.26 5.5 2.2 intron Awh + chr3L_14_3845001 chr3L_3845001 0.57 EF39_1-HE 265 chr3L 4738822 4738895 jockey 5 64 16 73 '13-3 50.48 7.1 2.0 intron RhoGEF64C + chr3L_16_4735001 chr3L_4735001 0.81 EF39_1-HE 266 chr3L 4935841 4935950 opus 7482 6 25 109 '15-10 63.37 5.0 4.2 intergenic not near genes chr3L_25_4935001 chr3L_4935001 0.60 EF39_1-HE 267 chr3L 5279756 5279846 3S18 4 6069 17 90 '14-3 63.38 2.7 4.6 intergenic not near genes chr3L_17_5275001 chr3L_5275001 0.82 EF39_1-HE 268 chr3L 5859902 5860035 hobo 2706 2 32 133 '22-10 68.05 5.1 5.2 intergenic not near genes chr3L_32_5855001 chr3L_5855001 0.69 EF39_1-HE 269 chr3L 5936688 5936771 hobo 2906 13 6 83 '2-4 63.97 3.6 1.3 intron CG33993 - chr3L_6_5935001 chr3L_5935001 0.33 EF39_1-HE 270 chr3L 5976365 5976453 hobo 2903 6 27 88 '10-17 64.25 10.6 2.3 intergenic CG10479 - chr3L_27_5975001 chr3L_5975001 0.37 EF39_1-HE 271 chr3L 6051824 6051952 297 6580 391 5 128 '4-1 73.57 4.2 1.0 intergenic Jon65Aiii +,Jon65Aii + chr3L_5_6050001 chr3L_6050001 0.80 EF39_1-HE 272 chr3L 6218331 6218450 copia 15 257 22 119 '6-16 65.35 3.5 4.9 intergenic LanA - chr3L_22_6215001 chr3L_6215001 0.27 EF39_1-HE 273 chr3L 6240518 6240552 Juan 4172 4206 6 34 '3-3 58.91 6.3 0.8 3` UTR Mdr65 - chr3L_6_6240001 chr3L_6240001 0.50 EF39_1-HE 274 chr3L 6540247 6540627 hobo 6 2874 29 380 '27-2 64.14 6.4 3.9 intron sfl + chr3L_29_6540001 chr3L_6540001 0.93 EF39_1-HE 275 chr3L 6667995 6668051 jockey 4815 4759 10 56 '4-6 70.43 5.1 1.6 intergenic CG32395 - chr3L_10_6665001 chr3L_6665001 0.40 EF39_1-HE 276 chr3L 6697843 6697975 Transpac 310 2 22 132 '9-13 68.57 5.3 3.5 intron SP1173 - chr3L_22_6695001 chr3L_6695001 0.41 EF39_1-HE 277 chr3L 7017947 7018060 hopper 1412 9 8 113 '4-4 63.34 5.4 1.2 intron Mp + chr3L_8_7015001 chr3L_7015001 0.50 EF39_1-HE 278 chr3L 7295103 7295236 412 1 494 40 133 '20-20 65.43 6.9 5.1 intron unc-13-4A - chr3L_40_7295001 chr3L_7295001 0.50 EF39_1-HE 279 chr3L 7478416 7478735 I-element 5307 4940 5 319 '4-1 65.17 3.9 1.0 intergenic not near genes chr3L_5_7475001 chr3L_7475001 0.80 EF39_1-HE 280 chr3L 7865206 7865334 Transpac 4923 308 31 128 '13-18 65.78 4.0 6.2 intron Pdp1 - chr3L_31_7865001 chr3L_7865001 0.42 EF39_1-HE 281 chr3L 8055686 8055732 412 9 7108 14 46 '7-7 62.59 5.8 2.1 intron bip1 - chr3L_14_8055001 chr3L_8055001 0.50 EF39_1-HE 282 chr3L 8251977 8252110 hobo 2 2710 20 133 '3-17 65.57 4.4 3.7 intron Dscam4 + chr3L_20_8250001 chr3L_8250001 0.15 EF39_1-HE 283 chr3L 8395213 8395296 invader4 324 38 8 83 '6-2 64.11 4.0 1.6 intergenic not near genes chr3L_8_8395001 chr3L_8395001 0.75 EF39_1-HE 284 chr3L 8528724 8528851 roo 408 4 16 127 '13-3 61.08 2.9 4.1 intron foi + chr3L_16_8525001 chr3L_8525001 0.81 EF39_1-HE 285 chr3L 8763297 8763410 S-element 1689 8 4 113 '1-3 50.49 1.2 1.8 intron Fhos + chr3L_4_8760001 chr3L_8760001 0.25 EF39_1-HE 286 chr3L 9120610 9120661 Doc 53 8 26 51 '15-11 69.14 13.2 1.8 intron bol - chr3L_26_9120001 chr3L_9120001 0.58 EF39_1-HE 287 chr3L 9290541 9290658 hobo 2936 2 16 117 '10-6 62.49 5.6 2.4 intergenic not near genes chr3L_16_9290001 chr3L_9290001 0.62 EF39_1-HE 288 chr3L 9291671 9291799 invader3 278 6 12 128 '10-2 68.07 4.1 2.4 intergenic not near genes chr3L_12_9290001 chr3L_9290001 0.83 EF39_1-HE 289 chr3L 9616726 9616835 opus 15 7493 13 109 '5-8 66.99 3.5 2.9 intron LanB2 + chr3L_13_9615001 chr3L_9615001 0.38 EF39_1-HE 290 chr3L 9907328 9907372 BS 5042 4998 7 44 '2-5 66.34 0.3 5.4 intergenic not near genes chr3L_7_9905001 chr3L_9905001 0.29 EF39_1-HE 291 chr3L 10042343 10042743 invader3 281 142 29 400 '27-2 62.91 4.5 5.3 intron dpr6 + chr3L_29_10040001 chr3L_10040001 0.93 EF39_1-HE 292 chr3L 10301317 10301442 roo 411 6 30 125 '20-10 69.59 5.3 4.8 intergenic not near genes chr3L_30_10300001 chr3L_10300001 0.67 EF39_1-HE 293 chr3L 10412662 10412746 Tc3 315 312 4 84 '3-1 56.69 2.2 1.2 intergenic CG12362 +,CR43990 - chr3L_4_10410001 chr3L_10410001 0.75 EF39_1-HE 294 chr3L 10971680 10971717 I-element 5311 5348 6 37 '3-3 68.26 6.3 0.8 intergenic not near genes chr3L_6_10970001 chr3L_10970001 0.50 EF39_1-HE 295 chr3L 11070499 11070594 hobo 25 2928 11 95 '3-8 57.08 3.4 2.5 intergenic Mocs1 + chr3L_11_11070001 chr3L_11070001 0.27 EF39_1-HE 296 chr3L 11086206 11086326 297 6591 394 15 120 '10-5 67.72 5.0 2.5 intron JIL-1 - chr3L_15_11085001 chr3L_11085001 0.67 EF39_1-HE 297 chr3L 11247534 11247647 P-element 12 5 26 113 '17-9 53.12 5.4 4.1 3` UTR CR44715 - chr3L_26_11245001 chr3L_11245001 0.65 EF39_1-HE 298 chr3L 11257351 11257421 1360 3377 3379 12 70 '6-6 54.37 4.7 2.1 intergenic not near genes chr3L_12_11255001 chr3L_11255001 0.50 EF39_1-HE 299 chr3L 11298478 11298562 jockey 4574 4866 17 84 '13-4 63.14 5.0 2.8 intergenic not near genes chr3L_17_11295001 chr3L_11295001 0.76 EF39_1-HE 300 chr3L 11523496 11523604 roo 12 9059 16 108 '4-12 63.53 3.5 3.6 intergenic not near genes chr3L_16_11520001 chr3L_11520001 0.25 EF39_1-HE 301 chr3L 11840534 11840668 opus 488 7113 24 134 '12-12 63.20 6.0 3.4 intergenic not near genes chr3L_24_11840001 chr3L_11840001 0.50 EF39_1-HE 302 chr3L 11912511 11912578 jockey 4758 4796 12 67 '7-5 65.78 6.0 1.7 intron CG44837 - chr3L_12_11910001 chr3L_11910001 0.58 EF39_1-HE 303 chr3L 12226225 12226263 roo 9017 391 17 38 '11-6 63.11 7.5 2.0 intron app - chr3L_17_12225001 chr3L_12225001 0.65 EF39_1-HE 304 chr3L 12634204 12634259 BS 5049 4994 13 55 '10-3 72.97 3.8 2.7 intron CR32111 + chr3L_13_12630001 chr3L_12630001 0.77 EF39_1-HE 305 chr3L 12871296 12871563 hobo 2 2895 19 267 '16-3 60.08 4.5 3.5 intergenic not near genes chr3L_19_12870001 chr3L_12870001 0.84 EF39_1-HE 306 chr3L 13364527 13364616 hopper 1390 17 5 89 '3-2 53.31 1.8 1.8 intergenic not near genes chr3L_5_13360001 chr3L_13360001 0.60 EF39_1-HE 307 chr3L 13366411 13366457 hopper 1365 4 9 46 '5-4 64.03 1.7 3.3 intergenic not near genes chr3L_9_13365001 chr3L_13365001 0.56 EF39_1-HE 308 chr3L 13429195 13429327 opus 498 2 14 132 '2-12 66.55 7.7 1.6 3` UTR CG10713 - chr3L_14_13425001 chr3L_13425001 0.14 EF39_1-HE 309 chr3L 13615882 13615984 jockey 6 4760 25 102 '22-3 65.19 12.0 1.9 intron bru-3 - chr3L_25_13615001 chr3L_13615001 0.88 EF39_1-HE 310 chr3L 13690124 13690253 mdg1 420 3 28 129 '18-10 63.68 4.7 4.9 intron bru-3 - chr3L_28_13690001 chr3L_13690001 0.64 EF39_1-HE 311 chr3L 13745840 13745963 412 2 484 31 123 '15-16 66.20 4.9 5.3 intron bru-3 - chr3L_31_13745001 chr3L_13745001 0.48 EF39_1-HE 312 chr3L 13992872 13992912 HMS-Beagle 205 246 6 40 '4-2 63.95 7.0 0.8 5` UTR CG17364 - chr3L_6_13990001 chr3L_13990001 0.67 EF39_1-HE 313 chr3L 14124992 14125117 opus 8 497 23 125 '7-16 64.62 7.4 2.7 intron Sox21b - chr3L_23_14120001 chr3L_14120001 0.30 EF39_1-HE 314 chr3L 14200974 14201088 roo 395 5 44 114 '21-23 64.81 10.5 3.8 intron nuf + chr3L_44_14200001 chr3L_14200001 0.48 EF39_1-HE 315 chr3L 14572086 14572216 Tirant 2 8503 39 130 '27-12 64.12 7.7 4.5 intergenic not near genes chr3L_39_14570001 chr3L_14570001 0.69 EF39_1-HE 316 chr3L 14991927 14991979 X-element 4664 4716 4 52 '2-2 68.84 3.7 0.9 intergenic mnd +,Zip71B + chr3L_4_14990001 chr3L_14990001 0.50 EF39_1-HE 317 chr3L 15026658 15026781 flea 4768 252 23 123 '3-20 67.77 4.8 4.0 intron Sytbeta - chr3L_23_15025001 chr3L_15025001 0.13 EF39_1-HE 318 chr3L 15099552 15099645 G4 3815 3806 10 93 '5-5 52.87 5.9 1.4 intron CTPsyn + chr3L_10_15095001 chr3L_15095001 0.50 EF39_1-HE 319 chr3L 15278440 15278568 hopper 1412 1413 22 128 '4-18 66.29 6.9 2.8 intergenic not near genes chr3L_22_15275001 chr3L_15275001 0.18 EF39_1-HE 320 chr3L 15292180 15292292 Juan 1 4203 17 112 '7-10 70.01 9.5 1.6 intergenic not near genes chr3L_17_15290001 chr3L_15290001 0.41 EF39_1-HE 321 chr3L 15323403 15324003 Transpac 335 4824 30 600 '28-2 68.58 8.8 3.1 intergenic not near genes chr3L_30_15320001 chr3L_15320001 0.93 EF39_1-HE 322 chr3L 15452654 15452947 accord 6958 7363 34 293 '1-33 64.45 9.2 3.3 intergenic not near genes chr3L_34_15450001 chr3L_15450001 0.03 EF39_1-HE 323 chr3L 15544823 15544963 hobo 2934 398 18 140 '12-6 64.89 6.7 2.3 intron CrebA + chr3L_18_15540001 chr3L_15540001 0.67 EF39_1-HE 324 chr3L 15741481 15741632 Doc 53 180 13 151 '12-1 65.77 6.6 1.7 intergenic not near genes chr3L_13_15740001 chr3L_15740001 0.92 EF39_1-HE 325 chr3L 15875253 15875366 hobo 2927 5 28 113 '12-16 66.87 8.2 3.0 intron pHCl - chr3L_28_15875001 chr3L_15875001 0.43 EF39_1-HE 326 chr3L 16013213 16013268 flea 256 4961 12 55 '9-3 45.96 4.6 2.1 intergenic not near genes chr3L_12_16010001 chr3L_16010001 0.75 EF39_1-HE 327 chr3L 16155264 16155302 Juan 4166 4203 6 38 '4-2 62.99 3.6 1.3 intron CG5151 - chr3L_6_16155001 chr3L_16155001 0.67 EF39_1-HE 328 chr3L 16541203 16541333 hopper 1413 1 20 130 '11-9 66.02 4.6 3.6 intron CG43373 - chr3L_20_16540001 chr3L_16540001 0.55 EF39_1-HE 329 chr3L 16893402 16893526 1360 3384 2 19 124 '13-6 65.94 4.1 3.7 intron Lmpt + chr3L_19_16890001 chr3L_16890001 0.68 EF39_1-HE 330 chr3L 16893780 16893905 roo 6 407 18 125 '8-10 65.40 4.9 3.1 intron Lmpt + chr3L_18_16890001 chr3L_16890001 0.44 EF39_1-HE 331 chr3L 16973363 16973472 S-element 1536 1708 10 109 '6-4 59.31 2.1 3.2 intron Exn + chr3L_10_16970001 chr3L_16970001 0.60 EF39_1-HE 332 chr3L 17133786 17134060 jockey 4675 4984 25 274 '14-11 64.07 3.7 5.3 intron Rbp6 - chr3L_25_17130001 chr3L_17130001 0.56 EF39_1-HE 333 chr3L 17407232 17407285 jockey 4938 4991 15 53 '6-9 62.91 5.5 2.3 intron blot - chr3L_15_17405001 chr3L_17405001 0.40 EF39_1-HE 334 chr3L 17599702 17599783 pogo 2096 50 10 81 '7-3 67.83 4.8 1.7 intron Eip74EF - chr3L_10_17595001 chr3L_17595001 0.70 EF39_1-HE 335 chr3L 18004623 18004962 mdg3 5277 5485 36 339 '2-34 64.26 5.7 5.4 intron Eip75B - chr3L_36_18000001 chr3L_18000001 0.06 EF39_1-HE 336 chr3L 18045625 18045744 Quasimodo 9 7363 16 119 '7-9 66.23 8.3 1.7 intron Eip75B - chr3L_16_18045001 chr3L_18045001 0.44 EF39_1-HE 337 chr3L 18403585 18403721 S-element 2 1709 26 136 '18-8 64.51 3.5 5.8 intergenic not near genes chr3L_26_18400001 chr3L_18400001 0.69 EF39_1-HE 338 chr3L 18737194 18737230 X-element 4662 4698 10 36 '6-4 65.45 3.7 2.1 intergenic not near genes chr3L_10_18735001 chr3L_18735001 0.60 EF39_1-HE 339 chr3L 18789707 18789765 jockey 4759 4802 20 58 '13-7 67.94 6.4 2.7 intron ftz-f1 - chr3L_20_18785001 chr3L_18785001 0.65 EF39_1-HE 340 chr3L 18948885 18948986 Juan 4206 1 16 101 '11-5 63.06 4.0 3.2 intergenic not near genes chr3L_16_18945001 chr3L_18945001 0.69 EF39_1-HE 341 chr3L 19161928 19162047 412 10 7546 23 119 '10-13 63.91 7.7 2.6 intron fz2 - chr3L_23_19160001 chr3L_19160001 0.43 EF39_1-HE 342 chr3L 19274793 19274903 transib2 20 2821 11 110 '8-3 64.09 3.2 2.6 intergenic not near genes chr3L_11_19270001 chr3L_19270001 0.73 EF39_1-HE 343 chr3L 19339394 19339448 Tc1 60 7 14 54 '9-5 65.26 6.5 1.9 intergenic not near genes chr3L_14_19335001 chr3L_19335001 0.64 EF39_1-HE 344 chr3L 19349917 19350018 1360 2 3207 17 101 '11-6 60.07 5.5 2.6 intron CG32206 - chr3L_17_19345001 chr3L_19345001 0.65 EF39_1-HE 345 chr3L 19457080 19457211 hopper 1414 1414 11 131 '9-2 71.11 2.5 3.1 intergenic not near genes chr3L_11_19455001 chr3L_19455001 0.82 EF39_1-HE 346 chr3L 20108254 20108297 G2 135 178 18 43 '11-7 61.98 1.8 6.4 intergenic Ir76b - chr3L_18_20105001 chr3L_20105001 0.61 EF39_1-HE 347 chr3L 20194199 20194322 FB 2 4 7 123 '4-3 68.46 1.5 2.8 intron CG42674 - chr3L_7_20190001 chr3L_20190001 0.57 EF39_1-HE 348 chr3L 20224119 20224242 Chimpo 186 10 15 123 '5-10 69.07 2.9 3.8 intron CG17147 + chr3L_15_20220001 chr3L_20220001 0.33 EF39_1-HE 349 chr3L 20711634 20711719 jockey 4991 4758 10 85 '1-9 64.84 5.6 1.5 intergenic not near genes chr3L_10_20710001 chr3L_20710001 0.10 EF39_1-HE 350 chr3L 20881995 20882115 roo 8668 400 36 120 '16-20 66.12 8.3 3.9 intron CG32432 - chr3L_36_20880001 chr3L_20880001 0.44 EF39_1-HE 351 chr3L 21266403 21266527 mdg1 7458 8 14 124 '11-3 67.59 3.5 3.1 3` UTR Eip78C + chr3L_14_21265001 chr3L_21265001 0.79 EF39_1-HE 352 chr3L 21301324 21301451 roo 402 8663 25 127 '14-11 66.65 4.7 4.4 intergenic CR45432 +,Cpr78Cc +,CG11309 - chr3L_25_21300001 chr3L_21300001 0.56 EF39_1-HE 353 chr3L 21326972 21327064 hopper 1375 1414 18 92 '8-10 66.52 4.5 3.3 intron Rab26 + chr3L_18_21325001 chr3L_21325001 0.44 EF39_1-HE 354 chr3L 21852478 21852583 jockey 4987 4674 27 105 '13-14 63.06 6.7 3.5 intron mub + chr3L_27_21850001 chr3L_21850001 0.48 EF39_1-HE 355 chr3L 21912241 21912364 Bari1 12 1705 41 123 '13-28 67.59 9.6 3.9 intron mub + chr3L_41_21910001 chr3L_21910001 0.32 EF39_1-HE 356 chr3L 21916889 21917026 412 4 5 4 137 '1-3 76.20 18.8 0.2 intron mub + chr3L_4_21915001 chr3L_21915001 0.25 EF39_1-HE 357 chr3L 22469832 22469960 Burdock 251 6138 8 128 '4-4 68.57 2.9 2.1 3` UTR CG11437 + chr3L_8_22465001 chr3L_22465001 0.50 EF39_1-HE 358 chr3L 22564512 22564548 Doc 54 18 21 36 '12-9 60.04 9.2 2.1 intergenic not near genes chr3L_21_22560001 chr3L_22560001 0.57 EF39_1-HE 359 chr3L 22597800 22597921 roo 8675 408 36 121 '12-24 66.14 7.1 4.4 intron CG14459 - chr3L_36_22595001 chr3L_22595001 0.33 EF39_1-HE 360 chr3L 22616954 22617080 hopper 4 3 11 126 '3-8 64.59 3.6 2.4 intron CG14459 - chr3L_11_22615001 chr3L_22615001 0.27 EF39_1-HE 361 chr3L 22633712 22633818 hopper 5 23 12 106 '6-6 62.79 3.6 2.6 intron CG14459 - chr3L_12_22630001 chr3L_22630001 0.50 EF39_1-HE 362 chr3L 22897488 22897569 jockey 4988 11 17 81 '8-9 62.94 5.4 2.7 intergenic not near genes chr3L_17_22895001 chr3L_22895001 0.47 EF39_1-HE 363 chr3L 23094690 23094749 1360 387 325 5 59 '3-2 74.80 8.8 0.5 exon RpL10 - chr3L_5_23090001 chr3L_23090001 0.60 EF39_1-HE 364 chr3L 23678116 23678155 Osvaldo 36 17 18 39 '7-11 72.18 14.8 1.1 intron AGO3 + chr3L_18_23675001 chr3L_23675001 0.39 EF39_1-HE 365 chr3L 23866756 23866796 diver 6 5933 6 40 '3-3 60.76 0.0 6.0 intron CG40470 - chr3L_6_23865001 chr3L_23865001 0.50 EF39_1-HE 366 chr3L 24029157 24029242 S-element 6 1671 6 85 '5-1 66.17 1.9 2.1 intron CG40045 + chr3L_6_24025001 chr3L_24025001 0.83 EF39_1-HE 367 chr3L 24916563 24916690 Porto1 57 149 8 127 '5-3 58.42 3.3 1.9 intergenic not near genes chr3L_8_24915001 chr3L_24915001 0.62 EF39_1-HE 368 chr3L 25232764 25232871 accord2 176 7437 14 107 '10-4 56.08 4.0 2.8 intergenic not near genes chr3L_14_25230001 chr3L_25230001 0.71 EF39_1-HE 369 chr3L 25272521 25272574 1360 10 89 7 53 '3-4 67.01 1.6 2.7 intron CG40467 - chr3L_7_25270001 chr3L_25270001 0.43 EF39_1-HE 370 chr3L 26719128 26719159 Tc1-2 4 35 4 31 '3-1 56.93 3.7 0.9 intergenic not near genes chr3L_4_26715001 chr3L_26715001 0.75 EF39_1-HE 371 chr3L 27104968 27105081 gypsy 7008 462 19 113 '4-15 62.58 2.9 4.9 intergenic not near genes chr3L_19_27100001 chr3L_27100001 0.21 EF39_1-HE 372 chr3L 27391724 27391778 invader4 2684 2630 35 54 '17-18 60.35 13.0 2.5 intron Dbp80 + chr3L_35_27390001 chr3L_27390001 0.49 EF39_1-HE 373 chr3L 27396086 27396118 invader4 2797 6 18 32 '9-9 52.32 7.6 2.1 intron Dbp80 + chr3L_18_27395001 chr3L_27395001 0.50 EF39_1-HE 374 chr3L 27415200 27415323 transib2 2822 8 17 123 '8-9 62.88 4.1 3.3 intron Dbp80 + chr3L_17_27415001 chr3L_27415001 0.47 EF39_1-HE 375 chr3R 435918 435946 1360 2989 3017 11 28 '3-8 57.88 2.4 3.2 intergenic not near genes chr3R_11_435001 chr3R_435001 0.27 EF39_1-HE 376 chr3R 1357224 1357260 Max-element 8249 8285 5 36 '2-3 64.34 5.1 0.8 intron CG40155 + chr3R_5_1355001 chr3R_1355001 0.40 EF39_1-HE 377 chr3R 1440148 1440276 McClintock 477 4 40 128 '15-25 69.03 9.4 3.8 intron CG40155 + chr3R_40_1440001 chr3R_1440001 0.38 EF39_1-HE 378 chr3R 1440643 1440824 McClintock 129 153 4 181 '2-2 67.58 18.4 0.2 intron CG40155 + chr3R_4_1440001 chr3R_1440001 0.50 EF39_1-HE 379 chr3R 2472894 2473006 invader4 2775 320 9 112 '2-7 65.29 8.0 1.0 intergenic not near genes chr3R_9_2470001 chr3R_2470001 0.22 EF39_1-HE 380 chr3R 2474271 2474338 Juan 4211 4018 16 67 '12-4 62.09 6.2 2.2 intergenic not near genes chr3R_16_2470001 chr3R_2470001 0.75 EF39_1-HE 381 chr3R 2557658 2557705 Cr1a 4446 4399 9 47 '4-5 60.41 10.6 0.8 intron CG41056 - chr3R_9_2555001 chr3R_2555001 0.44 EF39_1-HE 382 chr3R 2559971 2560093 mdg1 7075 7066 5 122 '2-3 68.77 3.3 1.2 intron CG41056 - chr3R_5_2555001 chr3R_2555001 0.40 EF39_1-HE 383 chr3R 2689420 2689566 diver2 4465 4563 5 146 '4-1 63.10 11.8 0.4 intron CG41056 - chr3R_5_2685001 chr3R_2685001 0.80 EF39_1-HE 384 chr3R 3257893 3257949 1360 31 3347 4 56 '3-1 69.23 3.0 1.0 intron CG42617 - chr3R_4_3255001 chr3R_3255001 0.75 EF39_1-HE 385 chr3R 3267340 3267469 gypsy5 6942 7347 31 129 '17-14 67.62 5.1 5.1 intergenic not near genes chr3R_31_3265001 chr3R_3265001 0.55 EF39_1-HE 386 chr3R 3355266 3355352 gypsy5 373 10 27 86 '6-21 68.70 7.0 3.4 intergenic not near genes chr3R_27_3355001 chr3R_3355001 0.22 EF39_1-HE 387 chr3R 4561253 4561289 Doc 40 5 6 36 '3-3 66.01 6.4 0.8 intergenic not near genes chr3R_6_4560001 chr3R_4560001 0.50 EF39_1-HE 388 chr3R 4600819 4600868 Doc 1 50 18 49 '8-10 66.40 25.8 0.7 intergenic not near genes chr3R_18_4600001 chr3R_4600001 0.44 EF39_1-HE 389 chr3R 4601065 4601414 297 6771 385 11 349 '1-10 63.09 11.3 0.9 intergenic not near genes chr3R_11_4600001 chr3R_4600001 0.09 EF39_1-HE 390 chr3R 4609417 4609506 R1A1-element 4860 5335 25 89 '12-13 67.01 5.9 3.6 intergenic not near genes chr3R_25_4605001 chr3R_4605001 0.48 EF39_1-HE 391 chr3R 4769931 4770054 copia 5 251 16 123 '9-7 66.01 5.5 2.5 intron,intron atms +,CG44098 - chr3R_16_4765001 chr3R_4765001 0.56 EF39_1-HE 392 chr3R 4831749 4831851 Juan 4211 8 12 102 '8-4 60.02 6.6 1.6 intergenic CG14659 - chr3R_12_4830001 chr3R_4830001 0.67 EF39_1-HE 393 chr3R 5103749 5103882 blood 380 7014 41 133 '20-21 64.18 7.6 4.8 intergenic not near genes chr3R_41_5100001 chr3R_5100001 0.49 EF39_1-HE 394 chr3R 5208130 5208239 hopper 1397 1409 19 109 '10-9 67.81 4.1 3.7 intron cno - chr3R_19_5205001 chr3R_5205001 0.53 EF39_1-HE 395 chr3R 5400339 5400415 Juan 16 4184 6 76 '2-4 62.69 4.0 1.2 intergenic CG2663 - chr3R_6_5400001 chr3R_5400001 0.33 EF39_1-HE 396 chr3R 5594927 5595041 1360 3380 8 12 114 '8-4 63.37 5.0 2.0 3` UTR Vha26 + chr3R_12_5590001 chr3R_5590001 0.67 EF39_1-HE 397 chr3R 5644525 5644639 HMS-Beagle 5 7027 18 114 '14-4 62.63 5.3 2.9 intron MTA1-like - chr3R_18_5640001 chr3R_5640001 0.78 EF39_1-HE 398 chr3R 5773129 5773210 Stalker 6854 362 10 81 '8-2 66.50 6.0 1.4 intron CG2082 - chr3R_10_5770001 chr3R_5770001 0.80 EF39_1-HE 399 chr3R 5773130 5773253 Stalker4 6 406 22 123 '12-10 65.57 5.2 3.5 intron CG2082 - chr3R_22_5770001 chr3R_5770001 0.55 EF39_1-HE 400 chr3R 5774325 5774556 pogo 2067 7 20 231 '2-18 67.57 5.7 3.0 intron CG2082 - chr3R_20_5770001 chr3R_5770001 0.10 EF39_1-HE 401 chr3R 5833392 5833521 roo 8665 406 22 129 '10-12 65.58 4.5 4.0 intron CG1208 + chr3R_22_5830001 chr3R_5830001 0.45 EF39_1-HE 402 chr3R 5990522 5990563 mdg1 7457 378 5 41 '3-2 68.72 5.0 0.8 intergenic CR44927 + chr3R_5_5990001 chr3R_5990001 0.60 EF39_1-HE 403 chr3R 6044854 6044904 Doc 3 53 21 50 '11-10 67.15 14.2 1.4 intergenic not near genes chr3R_21_6040001 chr3R_6040001 0.52 EF39_1-HE 404 chr3R 6088797 6088912 412 7536 8 20 115 '14-6 63.52 4.9 3.4 intergenic Gasp - chr3R_20_6085001 chr3R_6085001 0.70 EF39_1-HE 405 chr3R 6280349 6280393 I-element 5306 5350 8 44 '4-4 66.83 7.8 0.9 intron Osi12 + chr3R_8_6280001 chr3R_6280001 0.50 EF39_1-HE 406 chr3R 6427831 6427952 pogo 14 2100 24 121 '8-16 67.82 6.1 3.4 intron gpp + chr3R_24_6425001 chr3R_6425001 0.33 EF39_1-HE 407 chr3R 6561728 6561851 copia 252 6 22 123 '13-9 68.14 4.0 4.4 intron dpr11 - chr3R_22_6560001 chr3R_6560001 0.59 EF39_1-HE 408 chr3R 6609749 6609868 pogo 13 2097 28 119 '16-12 68.43 5.4 4.4 intergenic not near genes chr3R_28_6605001 chr3R_6605001 0.57 EF39_1-HE 409 chr3R 6635108 6635224 roo 410 17 19 116 '9-10 64.62 4.3 3.6 intergenic not near genes chr3R_19_6635001 chr3R_6635001 0.47 EF39_1-HE 410 chr3R 6635279 6635408 Tabor 1 7321 25 129 '9-16 65.93 3.0 6.2 intergenic not near genes chr3R_25_6635001 chr3R_6635001 0.36 EF39_1-HE 411 chr3R 6722520 6722645 opus 490 113 12 125 '4-8 67.71 10.3 1.1 intron pb - chr3R_12_6720001 chr3R_6720001 0.33 EF39_1-HE 412 chr3R 7058635 7058754 pogo 14 2098 12 119 '4-8 66.50 2.7 3.2 3` UTR CG1979 + chr3R_12_7055001 chr3R_7055001 0.33 EF39_1-HE 413 chr3R 7128834 7128944 FB 6 13 7 110 '6-1 64.50 2.0 2.3 5` UTR CR42875 + chr3R_7_7125001 chr3R_7125001 0.86 EF39_1-HE 414 chr3R 7382849 7382963 Tabor 7312 7 25 114 '8-17 62.65 6.7 3.2 intergenic not near genes chr3R_25_7380001 chr3R_7380001 0.32 EF39_1-HE 415 chr3R 7403944 7403994 X-element 69 19 11 50 '5-6 62.49 8.5 1.2 intergenic not near genes chr3R_11_7400001 chr3R_7400001 0.45 EF39_1-HE 416 chr3R 7485089 7485190 jockey 330 4984 17 101 '8-9 67.50 5.5 2.6 intergenic not near genes chr3R_17_7485001 chr3R_7485001 0.47 EF39_1-HE 417 chr3R 7521899 7521956 Doc 59 3 20 57 '10-10 65.29 7.2 2.4 intron alpha-Est7 - chr3R_20_7520001 chr3R_7520001 0.50 EF39_1-HE 418 chr3R 7625033 7625079 I-element 5 51 22 46 '9-13 65.11 17.1 1.2 intron CG34127 - chr3R_22_7625001 chr3R_7625001 0.41 EF39_1-HE 419 chr3R 7649763 7649892 Quasimodo 7363 1 14 129 '5-9 64.41 4.9 2.4 intergenic not near genes chr3R_14_7645001 chr3R_7645001 0.36 EF39_1-HE 420 chr3R 7872524 7872571 invader3 5188 5235 16 47 '9-7 65.65 8.6 1.7 intron CG17816 - chr3R_16_7870001 chr3R_7870001 0.56 EF39_1-HE 421 chr3R 7872599 7872647 hobo 50 2 24 48 '12-12 63.33 9.9 2.2 intron CG17816 - chr3R_24_7870001 chr3R_7870001 0.50 EF39_1-HE 422 chr3R 7940745 7940791 G-element 2 49 25 46 '10-15 59.99 13.3 1.7 intron dsx - chr3R_25_7940001 chr3R_7940001 0.40 EF39_1-HE 423 chr3R 8191973 8192003 Doc 31 62 18 30 '8-10 64.16 14.3 1.2 intergenic not near genes chr3R_18_8190001 chr3R_8190001 0.44 EF39_1-HE 424 chr3R 8198764 8198888 roo 8671 407 14 124 '6-8 69.84 4.8 2.4 intergenic not near genes chr3R_14_8195001 chr3R_8195001 0.43 EF39_1-HE 425 chr3R 8446210 8446262 jockey 10 63 15 52 '8-7 67.41 7.5 1.8 intron CG45263 - chr3R_15_8445001 chr3R_8445001 0.53 EF39_1-HE 426 chr3R 8548079 8548207 Quasimodo 2 7363 13 128 '9-4 67.33 4.0 2.6 intergenic not near genes chr3R_13_8545001 chr3R_8545001 0.69 EF39_1-HE 427 chr3R 8631775 8631902 297 6970 4 13 127 '9-4 69.16 5.3 2.1 intergenic not near genes chr3R_13_8630001 chr3R_8630001 0.69 EF39_1-HE 428 chr3R 8876795 8876925 roo 8664 406 42 130 '19-23 69.98 6.8 5.4 intron pyd - chr3R_42_8875001 chr3R_8875001 0.45 EF39_1-HE 429 chr3R 9054509 9054612 P-element 2875 14 4 103 '2-2 65.84 4.3 0.8 intron Kdm2 + chr3R_4_9050001 chr3R_9050001 0.50 EF39_1-HE 430 chr3R 9275270 9275365 hobo 2922 4 22 95 '6-16 63.57 5.6 3.3 intergenic not near genes chr3R_22_9275001 chr3R_9275001 0.27 EF39_1-HE 431 chr3R 9287993 9288114 Stalker2 6 404 29 121 '18-11 63.87 6.8 3.7 intergenic not near genes chr3R_29_9285001 chr3R_9285001 0.62 EF39_1-HE 432 chr3R 9565991 9566112 pogo 2098 12 11 121 '3-8 67.51 3.5 2.4 3` UTR Vps45 + chr3R_11_9565001 chr3R_9565001 0.27 EF39_1-HE 433 chr3R 9951921 9952054 297 393 6580 26 133 '6-20 71.21 7.6 3.0 intron Glut4EF + chr3R_26_9950001 chr3R_9950001 0.23 EF39_1-HE 434 chr3R 10030698 10030792 BS 5079 5019 20 94 '9-11 62.35 5.0 3.3 intron Mical - chr3R_20_10030001 chr3R_10030001 0.45 EF39_1-HE 435 chr3R 10095096 10095134 Rt1b 5010 4972 7 38 '3-4 65.35 7.9 0.8 5` UTR CR43459 + chr3R_7_10095001 chr3R_10095001 0.43 EF39_1-HE 436 chr3R 10193082 10193203 invader3 5188 5454 45 121 '11-34 65.39 7.9 5.1 intron Syn + chr3R_45_10190001 chr3R_10190001 0.24 EF39_1-HE 437 chr3R 10417514 10417629 mdg3 5259 5487 24 115 '14-10 64.45 5.9 3.5 intergenic not near genes chr3R_24_10415001 chr3R_10415001 0.58 EF39_1-HE 438 chr3R 10434530 10434652 1360 3382 2 31 122 '18-13 64.90 6.1 4.4 intergenic Cyp12e1 + chr3R_31_10430001 chr3R_10430001 0.58 EF39_1-HE 439 chr3R 10445493 10445580 hopper 10 36 19 87 '17-2 62.50 6.7 2.5 intergenic not near genes chr3R_19_10445001 chr3R_10445001 0.89 EF39_1-HE 440 chr3R 10593320 10593369 hobo 4 53 15 49 '7-8 67.53 7.2 1.8 intron hth - chr3R_15_10590001 chr3R_10590001 0.47 EF39_1-HE 441 chr3R 10708271 10708385 1360 10 3386 12 114 '6-6 64.91 4.8 2.1 5` UTR CG31278 - chr3R_12_10705001 chr3R_10705001 0.50 EF39_1-HE 442 chr3R 10718022 10718115 Juan 4026 4190 11 93 '6-5 64.54 4.7 1.9 intergenic not near genes chr3R_11_10715001 chr3R_10715001 0.55 EF39_1-HE 443 chr3R 10741066 10741148 1360 3 3359 21 82 '12-9 55.40 6.9 2.7 intron TkR86C - chr3R_21_10740001 chr3R_10740001 0.57 EF39_1-HE 444 chr3R 11005351 11005510 X-element 61 274 11 159 '10-1 66.16 3.1 2.7 intron CG34114 + chr3R_11_11005001 chr3R_11005001 0.91 EF39_1-HE 445 chr3R 11062213 11062354 mdg1 276 370 19 141 '1-18 64.88 10.9 1.6 intergenic not near genes chr3R_19_11060001 chr3R_11060001 0.05 EF39_1-HE 446 chr3R 11087076 11087414 mdg1 10 7455 24 338 '23-1 62.74 6.4 3.2 intergenic not near genes chr3R_24_11085001 chr3R_11085001 0.96 EF39_1-HE 447 chr3R 11105192 11105238 mdg3 5259 53 11 46 '5-6 66.72 7.5 1.3 intergenic not near genes chr3R_11_11105001 chr3R_11105001 0.45 EF39_1-HE 448 chr3R 11131682 11131805 Stalker2 397 4 20 123 '9-11 64.09 4.4 3.7 intergenic not near genes chr3R_20_11130001 chr3R_11130001 0.45 EF39_1-HE 449 chr3R 11151798 11151923 mdg3 238 5252 24 125 '16-8 65.68 4.9 4.1 3` UTR Ugt86Di - chr3R_24_11150001 chr3R_11150001 0.67 EF39_1-HE 450 chr3R 11182847 11182942 roo 402 20 15 95 '10-5 66.92 2.9 3.8 intergenic not near genes chr3R_15_11180001 chr3R_11180001 0.67 EF39_1-HE 451 chr3R 11195669 11195788 roo 14 408 12 119 '4-8 60.95 2.5 3.4 intergenic CG18577 + chr3R_12_11195001 chr3R_11195001 0.33 EF39_1-HE 452 chr3R 11321665 11321770 hobo 2929 15 20 105 '8-12 63.52 4.2 3.8 intergenic not near genes chr3R_20_11320001 chr3R_11320001 0.40 EF39_1-HE 453 chr3R 11515384 11515431 hobo 2709 2894 4 47 '2-2 74.01 9.1 0.4 intergenic not near genes chr3R_4_11515001 chr3R_11515001 0.50 EF39_1-HE 454 chr3R 11569231 11569334 hobo 2920 8 13 103 '7-6 59.56 3.0 3.2 intergenic Mrp4 + chr3R_13_11565001 chr3R_11565001 0.54 EF39_1-HE 455 chr3R 11612005 11612130 opus 4 7498 32 125 '16-16 69.06 13.1 2.3 intron Jupiter - chr3R_32_11610001 chr3R_11610001 0.50 EF39_1-HE 456 chr3R 11618500 11618693 412 4 7469 27 193 '18-9 65.35 4.9 4.6 intron Jupiter - chr3R_27_11615001 chr3R_11615001 0.67 EF39_1-HE 457 chr3R 11731584 11731720 opus 499 3 14 136 '5-9 67.61 4.0 2.8 intron CG12594 + chr3R_14_11730001 chr3R_11730001 0.36 EF39_1-HE 458 chr3R 11732203 11732253 roo 9024 410 18 50 '10-8 66.48 5.5 2.8 3` UTR CG12594 + chr3R_18_11730001 chr3R_11730001 0.56 EF39_1-HE 459 chr3R 11761436 11761562 FB 1 2 12 126 '11-1 67.99 3.5 2.7 intron Lk6 - chr3R_12_11760001 chr3R_11760001 0.92 EF39_1-HE 460 chr3R 11993992 11994111 mdg1 7050 419 15 119 '6-9 61.59 3.1 3.7 intergenic Tk - chr3R_15_11990001 chr3R_11990001 0.40 EF39_1-HE 461 chr3R 12005416 12005523 hobo 8 2924 15 107 '10-5 64.76 5.4 2.3 5` UTR Tk - chr3R_15_12005001 chr3R_12005001 0.67 EF39_1-HE 462 chr3R 12167551 12167608 jockey 4675 4732 20 57 '11-9 62.69 11.0 1.7 intergenic not near genes chr3R_20_12165001 chr3R_12165001 0.55 EF39_1-HE 463 chr3R 12366323 12366443 Tabor 7321 6849 36 120 '17-19 62.90 6.0 5.1 exon GstD9 - chr3R_36_12365001 chr3R_12365001 0.47 EF39_1-HE 464 chr3R 12372890 12373020 flea 4757 5011 16 130 '9-7 67.58 8.1 1.8 intergenic GstD3 +,GstD2 + chr3R_16_12370001 chr3R_12370001 0.56 EF39_1-HE 465 chr3R 12379131 12379259 3S18 341 5 24 128 '15-9 64.57 3.6 5.2 exon GstD7 + chr3R_24_12375001 chr3R_12375001 0.62 EF39_1-HE 466 chr3R 13173175 13173279 I-element 9 5344 25 104 '24-1 64.57 7.2 3.0 intergenic not near genes chr3R_25_13170001 chr3R_13170001 0.96 EF39_1-HE 467 chr3R 13364543 13364651 pogo 2088 15 17 108 '8-9 66.92 5.0 2.8 intron poly - chr3R_17_13360001 chr3R_13360001 0.47 EF39_1-HE 468 chr3R 13467651 13467819 Transpac 9 5221 16 168 '8-8 65.76 5.4 2.5 intergenic not near genes chr3R_16_13465001 chr3R_13465001 0.50 EF39_1-HE 469 chr3R 13535596 13535725 diver 5887 220 32 129 '18-14 65.80 5.1 5.2 intergenic not near genes chr3R_32_13535001 chr3R_13535001 0.56 EF39_1-HE 470 chr3R 14098636 14098738 jockey 4680 4988 23 102 '13-10 63.65 7.2 2.8 intergenic not near genes chr3R_23_14095001 chr3R_14095001 0.57 EF39_1-HE 471 chr3R 14193876 14194000 pogo 9 2098 28 124 '12-16 67.30 5.2 4.5 intron Dop1R1 - chr3R_28_14190001 chr3R_14190001 0.43 EF39_1-HE 472 chr3R 14334280 14334328 roo 351 400 14 48 '4-10 61.39 3.7 3.0 intron NK7.1 - chr3R_14_14330001 chr3R_14330001 0.29 EF39_1-HE 473 chr3R 14406584 14406715 mdg1 7038 419 39 131 '22-17 67.01 7.3 4.7 intron cv-c - chr3R_39_14405001 chr3R_14405001 0.56 EF39_1-HE 474 chr3R 14676652 14676769 mdg3 5251 5482 33 117 '16-17 64.03 5.1 5.4 intron Meltrin - chr3R_33_14675001 chr3R_14675001 0.48 EF39_1-HE 475 chr3R 14750598 14750709 roo 402 4 26 111 '9-17 71.77 2.2 8.1 intron,intron jvl +,smp-30 - chr3R_26_14750001 chr3R_14750001 0.35 EF39_1-HE 476 chr3R 14857224 14857349 flea 4758 5011 26 125 '18-8 68.25 6.4 3.5 intron btsz - chr3R_26_14855001 chr3R_14855001 0.69 EF39_1-HE 477 chr3R 14860132 14860240 BS 5085 4996 15 108 '4-11 64.34 2.4 4.4 intron btsz - chr3R_15_14860001 chr3R_14860001 0.27 EF39_1-HE 478 chr3R 14907001 14907105 roo 2 407 12 104 '9-3 55.41 2.7 3.2 intergenic not near genes chr3R_12_14905001 chr3R_14905001 0.75 EF39_1-HE 479 chr3R 15626655 15626769 I-element 5346 1 28 114 '3-25 65.90 6.6 3.7 intergenic not near genes chr3R_28_15625001 chr3R_15625001 0.11 EF39_1-HE 480 chr3R 15767883 15768003 297 6580 6960 22 120 '14-8 69.39 5.3 3.5 intergenic CG5623 - chr3R_22_15765001 chr3R_15765001 0.64 EF39_1-HE 481 chr3R 15790054 15790157 flea 4703 4696 68 103 '37-31 56.55 9.4 6.5 exon c(3)G - chr3R_68_15790001 chr3R_15790001 0.54 EF39_1-HE 482 chr3R 16503917 16503952 Transpac 4957 3 13 35 '4-9 53.43 2.4 3.8 intron CG42342 + chr3R_13_16500001 chr3R_16500001 0.31 EF39_1-HE 483 chr3R 17018651 17018704 G6 54 1 7 53 '4-3 68.42 4.7 1.2 intron Pxd + chr3R_7_17015001 chr3R_17015001 0.57 EF39_1-HE 484 chr3R 17181531 17181646 hobo 3 2927 21 115 '9-12 64.01 6.2 2.9 intron Mur89F - chr3R_21_17180001 chr3R_17180001 0.43 EF39_1-HE 485 chr3R 17374943 17375070 hopper 3 2 25 127 '8-17 65.22 4.7 4.4 3` UTR Brf - chr3R_25_17370001 chr3R_17370001 0.32 EF39_1-HE 486 chr3R 17725048 17725188 flea 4760 225 15 140 '10-5 62.19 3.8 3.1 intergenic Atg8b - chr3R_15_17725001 chr3R_17725001 0.67 EF39_1-HE 487 chr3R 17759706 17759836 HMS-Beagle2 7195 4 37 130 '13-24 67.23 6.0 5.3 intron TyrR - chr3R_37_17755001 chr3R_17755001 0.35 EF39_1-HE 488 chr3R 17855248 17855394 hobo 2645 2936 15 146 '5-10 67.05 6.5 2.0 intron tinc + chr3R_15_17855001 chr3R_17855001 0.33 EF39_1-HE 489 chr3R 18349466 18349567 roo 10 387 30 101 '14-16 69.01 5.3 4.8 intron CG15803 - chr3R_30_18345001 chr3R_18345001 0.47 EF39_1-HE 490 chr3R 18541194 18541304 hobo 5 2924 23 110 '12-11 64.80 6.9 2.9 intron fru - chr3R_23_18540001 chr3R_18540001 0.52 EF39_1-HE 491 chr3R 18557264 18557376 copia 248 4882 23 112 '17-6 64.33 4.9 3.9 intergenic not near genes chr3R_23_18555001 chr3R_18555001 0.74 EF39_1-HE 492 chr3R 18910219 18910337 3S18 2 328 32 118 '20-12 62.87 4.3 6.0 3` UTR EndoA + chr3R_32_18910001 chr3R_18910001 0.62 EF39_1-HE 493 chr3R 18917845 18917875 S2 1677 1707 5 30 '2-3 80.20 4.5 0.9 intron Xrp1 + chr3R_5_18915001 chr3R_18915001 0.40 EF39_1-HE 494 chr3R 18995372 18995491 hobo 2938 6 21 119 '7-14 63.44 6.3 2.9 intron gukh + chr3R_21_18995001 chr3R_18995001 0.33 EF39_1-HE 495 chr3R 19294778 19294909 F-element 4672 4670 4 131 '2-2 56.19 2.3 1.2 intergenic not near genes chr3R_4_19290001 chr3R_19290001 0.50 EF39_1-HE 496 chr3R 19589897 19589951 BS 4995 5049 18 54 '11-7 63.15 8.3 1.9 intron Dys + chr3R_18_19585001 chr3R_19585001 0.61 EF39_1-HE 497 chr3R 19725720 19725849 hopper 1412 1 21 129 '9-12 62.97 2.0 7.0 intergenic not near genes chr3R_21_19725001 chr3R_19725001 0.43 EF39_1-HE 498 chr3R 20124352 20124484 roo 409 8665 24 132 '16-8 65.45 4.0 4.8 intergenic not near genes chr3R_24_20120001 chr3R_20120001 0.67 EF39_1-HE 499 chr3R 20562916 20563042 invader3 5186 5456 17 126 '7-10 62.69 4.7 3.0 intron,exon CG5191 +,CG10877 - chr3R_17_20560001 chr3R_20560001 0.41 EF39_1-HE 500 chr3R 21054643 21054760 1360 3381 6 17 117 '7-10 66.90 4.6 3.0 intron Mvl - chr3R_17_21050001 chr3R_21050001 0.41 EF39_1-HE 501 chr3R 21827572 21827728 Tc3 78 77 5 156 '1-4 76.84 6.0 0.7 intergenic not near genes chr3R_5_21825001 chr3R_21825001 0.20 EF39_1-HE 502 chr3R 21988063 21988366 jockey 4794 4722 18 303 '1-17 66.84 12.9 1.3 intron Eip93F + chr3R_18_21985001 chr3R_21985001 0.06 EF39_1-HE 503 chr3R 22272446 22272566 invader3 5459 9 37 120 '24-13 65.79 9.8 3.4 intron SKIP + chr3R_37_22270001 chr3R_22270001 0.65 EF39_1-HE 504 chr3R 22779568 22779609 I-element 5349 5308 9 41 '2-7 60.40 5.6 1.4 intron,3` UTR CG7029 +,CR43654 - chr3R_9_22775001 chr3R_22775001 0.22 EF39_1-HE 505 chr3R 22976172 22976676 I-element 5136 4 20 504 '2-18 63.97 3.5 4.4 intergenic not near genes chr3R_20_22975001 chr3R_22975001 0.10 EF39_1-HE 506 chr3R 23045306 23045462 hobo 2935 211 17 156 '7-10 65.65 5.9 2.5 exon CG17121 - chr3R_17_23045001 chr3R_23045001 0.41 EF39_1-HE 507 chr3R 23066634 23066670 Quasimodo 7321 7357 4 36 '1-3 68.81 7.1 0.5 intron CG17111 - chr3R_4_23065001 chr3R_23065001 0.25 EF39_1-HE 508 chr3R 23407194 23407320 mdg1 420 6 17 126 '13-4 67.22 6.2 2.4 exon Ir94e + chr3R_17_23405001 chr3R_23405001 0.76 EF39_1-HE 509 chr3R 23676842 23676952 I-element 5344 2 16 110 '5-11 61.51 6.0 2.3 intergenic not near genes chr3R_16_23675001 chr3R_23675001 0.31 EF39_1-HE 510 chr3R 23740664 23740760 pogo 2068 7 14 96 '6-8 67.65 4.7 2.5 intron Hmgcr + chr3R_14_23740001 chr3R_23740001 0.43 EF39_1-HE 511 chr3R 23962498 23962618 hobo 3 2931 10 120 '7-3 67.96 2.5 2.9 3` UTR AP-1sigma + chr3R_10_23960001 chr3R_23960001 0.70 EF39_1-HE 512 chr3R 24301557 24301680 copia 252 6 14 123 '9-5 64.15 1.9 4.8 intron crb + chr3R_14_24300001 chr3R_24300001 0.64 EF39_1-HE 513 chr3R 24303084 24303164 FB 16 33 9 80 '6-3 60.50 1.9 3.1 intron crb + chr3R_9_24300001 chr3R_24300001 0.67 EF39_1-HE 514 chr3R 24512928 24513051 G3 4506 4507 4 123 '2-2 65.51 3.8 0.8 intron nAChRbeta2 - chr3R_4_24510001 chr3R_24510001 0.50 EF39_1-HE 515 chr3R 24732731 24732768 Juan 4066 4029 10 37 '1-9 63.18 2.7 2.7 intron tok + chr3R_10_24730001 chr3R_24730001 0.10 EF39_1-HE 516 chr3R 25155500 25155626 hobo 2 2937 17 126 '11-6 64.25 6.0 2.4 intergenic not near genes chr3R_17_25155001 chr3R_25155001 0.65 EF39_1-HE 517 chr3R 25354682 25354805 hopper 3 1414 10 123 '6-4 63.67 3.3 2.3 intron Fur1 - chr3R_10_25350001 chr3R_25350001 0.60 EF39_1-HE 518 chr3R 25362849 25362895 X-element 61 17 8 46 '7-1 58.15 4.6 1.4 intron Fur1 - chr3R_8_25360001 chr3R_25360001 0.88 EF39_1-HE 519 chr3R 25379349 25379699 invader3 5218 5462 30 350 '1-29 64.96 4.6 5.4 intron Fur1 - chr3R_30_25375001 chr3R_25375001 0.03 EF39_1-HE 520 chr3R 25416882 25417003 hopper 1407 1411 14 121 '6-8 63.30 1.9 4.8 intron Fur1 - chr3R_14_25415001 chr3R_25415001 0.43 EF39_1-HE 521 chr3R 25715559 25715729 Transpac 5173 5227 11 170 '4-7 65.22 4.9 1.9 intron LpR2 - chr3R_11_25715001 chr3R_25715001 0.36 EF39_1-HE 522 chr3R 25795991 25796092 BS 5000 5077 19 101 '9-10 63.30 3.9 3.9 intergenic not near genes chr3R_19_25795001 chr3R_25795001 0.47 EF39_1-HE 523 chr3R 25824241 25824326 hobo 15 2909 11 85 '7-4 64.55 4.4 2.0 3` UTR CR44949 - chr3R_11_25820001 chr3R_25820001 0.64 EF39_1-HE 524 chr3R 26070613 26070928 Doc 193 417 22 315 '21-1 66.25 7.9 2.5 3` UTR CR44950 - chr3R_22_26070001 chr3R_26070001 0.95 EF39_1-HE 525 chr3R 26167212 26167337 1360 2 4 16 125 '9-7 68.53 3.5 3.6 intergenic not near genes chr3R_16_26165001 chr3R_26165001 0.56 EF39_1-HE 526 chr3R 26305068 26305180 pogo 2089 12 11 112 '5-6 65.44 3.6 2.4 intergenic not near genes chr3R_11_26305001 chr3R_26305001 0.45 EF39_1-HE 527 chr3R 26689058 26689161 hobo 2924 12 15 103 '4-11 62.43 4.3 2.8 intergenic not near genes chr3R_15_26685001 chr3R_26685001 0.27 EF39_1-HE 528 chr3R 26770896 26770932 I-element 5309 5345 9 36 '3-6 64.36 9.2 0.9 intergenic not near genes chr3R_9_26770001 chr3R_26770001 0.33 EF39_1-HE 529 chr3R 27020201 27020302 1360 1 29 19 101 '11-8 67.08 6.8 2.4 intron RYa-R + chr3R_19_27020001 chr3R_27020001 0.58 EF39_1-HE 530 chr3R 27088413 27088451 X-element 4247 4285 9 38 '4-5 62.44 5.6 1.4 intergenic not near genes chr3R_9_27085001 chr3R_27085001 0.44 EF39_1-HE 531 chr3R 27140407 27140505 FB 2 34 4 98 '1-3 70.05 2.1 1.3 intron CG6051 - chr3R_4_27140001 chr3R_27140001 0.25 EF39_1-HE 532 chr3R 27315876 27315959 roo 41 400 16 83 '3-13 62.77 1.9 5.5 intron CG3339 - chr3R_16_27315001 chr3R_27315001 0.19 EF39_1-HE 533 chr3R 27340178 27340295 roo 407 14 20 117 '11-9 66.39 4.0 4.0 intergenic CG42534 + chr3R_20_27340001 chr3R_27340001 0.55 EF39_1-HE 534 chr3R 27376225 27376351 blood 5 7387 29 126 '12-17 65.80 8.9 2.9 3` UTR side - chr3R_29_27375001 chr3R_27375001 0.41 EF39_1-HE 535 chr3R 27448903 27449008 hobo 1 2915 18 105 '12-6 66.89 2.3 5.5 intergenic not near genes chr3R_18_27445001 chr3R_27445001 0.67 EF39_1-HE 536 chr3R 27504968 27505087 hobo 4 2932 19 119 '9-10 62.07 4.9 3.2 intergenic not near genes chr3R_19_27500001 chr3R_27500001 0.47 EF39_1-HE 537 chr3R 27954173 27954271 flea 4779 243 6 98 '3-3 61.23 2.1 1.9 intergenic CG4951 - chr3R_6_27950001 chr3R_27950001 0.50 EF39_1-HE 538 chr3R 28197045 28197116 hobo 41 2921 15 71 '9-6 71.97 7.7 1.7 intron CG34354 + chr3R_15_28195001 chr3R_28195001 0.60 EF39_1-HE 539 chr3R 28430561 28430684 1731 6 312 23 123 '12-11 67.06 4.8 4.0 intron beat-VI + chr3R_23_28430001 chr3R_28430001 0.52 EF39_1-HE 540 chr3R 28485424 28485519 I-element 1 5327 15 95 '11-4 63.95 26.9 0.5 exon CG1894 + chr3R_15_28485001 chr3R_28485001 0.73 EF39_1-HE 541 chr3R 28607912 28608197 Quasimodo 9 120 15 285 '14-1 65.72 6.6 2.0 3` UTR CG9986 + chr3R_15_28605001 chr3R_28605001 0.93 EF39_1-HE 542 chr3R 28664617 28664740 297 391 8 38 123 '16-22 70.19 8.4 4.0 intergenic not near genes chr3R_38_28660001 chr3R_28660001 0.42 EF39_1-HE 543 chr3R 28877251 28877377 blood 7015 7386 17 126 '9-8 64.30 7.2 2.1 intron,exon CG33203 -,CG14528 + chr3R_17_28875001 chr3R_28875001 0.53 EF39_1-HE 544 chr3R 29089855 29089986 copia 255 1 36 131 '22-14 66.22 7.9 4.0 intron CG11873 + chr3R_36_29085001 chr3R_29085001 0.61 EF39_1-HE 545 chr3R 29207516 29207559 copia 4871 4914 5 43 '3-2 68.52 5.8 0.7 intergenic not near genes chr3R_5_29205001 chr3R_29205001 0.60 EF39_1-HE 546 chr3R 29421905 29421992 hobo 4 2900 5 87 '3-2 68.43 4.7 0.9 intron Ptp99A + chr3R_5_29420001 chr3R_29420001 0.60 EF39_1-HE 547 chr3R 29513745 29513862 mdg1 7452 7038 20 117 '1-19 62.84 4.9 3.4 intergenic not near genes chr3R_20_29510001 chr3R_29510001 0.05 EF39_1-HE 548 chr3R 29650551 29650663 hobo 3 2924 25 112 '18-7 64.61 1.6 9.6 intron Dop1R2 - chr3R_25_29650001 chr3R_29650001 0.72 EF39_1-HE 549 chr3R 29659665 29659707 jockey 4939 4981 6 42 '2-4 64.69 2.2 1.9 intron Dop1R2 - chr3R_6_29655001 chr3R_29655001 0.33 EF39_1-HE 550 chr3R 29759645 29759723 412 492 7107 16 78 '7-9 67.15 5.7 2.4 intergenic not near genes chr3R_16_29755001 chr3R_29755001 0.44 EF39_1-HE 551 chr3R 29763951 29764082 blood 374 7009 29 131 '9-20 67.22 7.1 3.6 intergenic not near genes chr3R_29_29760001 chr3R_29760001 0.31 EF39_1-HE 552 chr3R 29980365 29980479 I-element 1 5350 12 114 '9-3 67.78 6.6 1.6 intergenic not near genes chr3R_12_29980001 chr3R_29980001 0.75 EF39_1-HE 553 chr3R 30216278 30216490 opus 7476 473 12 212 '1-11 59.78 6.0 1.7 intergenic CecC + chr3R_12_30215001 chr3R_30215001 0.08 EF39_1-HE 554 chr3R 30528380 30528494 hobo 1 2937 23 114 '11-12 65.46 3.8 4.8 3` UTR CR45552 - chr3R_23_30525001 chr3R_30525001 0.48 EF39_1-HE 555 chr3R 30796292 30796424 mdg3 247 5252 26 132 '9-17 59.91 2.1 8.4 intron wts - chr3R_26_30795001 chr3R_30795001 0.35 EF39_1-HE 556 chr3R 30906199 30906559 I-element 5347 264 23 360 '20-3 57.32 5.6 3.5 intergenic not near genes chr3R_23_30905001 chr3R_30905001 0.87 EF39_1-HE 557 chr3R 31109222 31109343 Burdock 247 4 28 121 '13-15 62.23 6.0 4.0 intergenic CG11318 - chr3R_28_31105001 chr3R_31105001 0.46 EF39_1-HE 558 chr3R 31213325 31213378 BS 4996 5049 9 53 '4-5 63.25 6.8 1.2 5` UTR Zwilch - chr3R_9_31210001 chr3R_31210001 0.44 EF39_1-HE 559 chr3R 31428484 31428598 jockey 4984 6 39 114 '14-25 61.03 9.2 3.8 intron Gprk2 + chr3R_39_31425001 chr3R_31425001 0.36 EF39_1-HE 560 chr3R 31489577 31489704 copia 3 256 20 127 '12-8 68.29 6.3 2.7 intergenic not near genes chr3R_20_31485001 chr3R_31485001 0.60 EF39_1-HE 561 chr3R 32031537 32031658 412 7545 11 16 121 '13-3 70.09 5.3 2.5 intergenic not near genes chr3R_16_32030001 chr3R_32030001 0.81 EF39_1-HE 562 chr4 353410 353464 BS3 1752 1687 5 54 '4-1 65.55 9.1 0.5 intron PMCA - chr4_5_350001 chr4_350001 0.80 EF39_1-HE 563 chr4 474732 474843 pogo 2083 7 16 111 '7-9 65.37 14.6 1.0 exon Asator - chr4_16_470001 chr4_470001 0.44 EF39_1-HE 564 chr4 490233 490340 pogo 24 2096 16 107 '7-9 65.34 10.2 1.4 intergenic not near genes chr4_16_490001 chr4_490001 0.44 EF39_1-HE 565 chr4 829294 829449 INE-1 89 78 5 155 '1-4 76.79 15.4 0.3 intron Sox102F - chr4_5_825001 chr4_825001 0.20 EF39_1-HE 566 chr4 835427 835539 opus 474 111 20 112 '8-12 64.46 7.1 2.5 intergenic not near genes chr4_20_835001 chr4_835001 0.40 EF39_1-HE 567 chr4 868623 868749 roo 3 405 32 126 '12-20 67.29 11.8 2.5 5` UTR CR43425 + chr4_32_865001 chr4_865001 0.38 EF39_1-HE 568 chr4 880282 880410 pogo 2096 3 15 128 '7-8 68.58 7.0 1.9 intron,5` UTR unc-13 -,CR44029 + chr4_15_880001 chr4_880001 0.47 EF39_1-HE 569 chr4 909129 909161 1360 3300 3332 7 32 '4-3 60.12 14.9 0.4 5` UTR unc-13 - chr4_7_905001 chr4_905001 0.57 EF39_1-HE 570 chr4 1023646 1023674 Idefix 2 30 5 28 '2-3 68.87 5.9 0.7 5` UTR PlexA - chr4_5_1020001 chr4_1020001 0.40 EF39_1-HE 571 chrX 872086 872140 hobo 2710 2888 8 54 '1-7 71.68 6.8 1.0 intron CG43867 - chrX_8_870001 chrX_870001 0.12 EF39_1-HE 572 chrX 877427 877522 412 7517 9 28 95 '15-13 63.18 9.8 2.6 intron CG43867 - chrX_28_875001 chrX_875001 0.54 EF39_1-HE 573 chrX 983298 983401 Juan 4200 3802 36 103 '12-24 63.19 9.4 3.5 intergenic not near genes chrX_36_980001 chrX_980001 0.33 EF39_1-HE 574 chrX 1018345 1018471 hopper 1409 1413 21 126 '8-13 67.81 5.5 3.2 intron,intron su(w[a]) +,CG11638 - chrX_21_1015001 chrX_1015001 0.38 EF39_1-HE 575 chrX 1131435 1131550 roo 399 8672 24 115 '13-11 66.46 5.1 3.9 intron CG3655 - chrX_24_1130001 chrX_1130001 0.54 EF39_1-HE 576 chrX 1196962 1197091 Transpac 4923 309 27 129 '9-18 67.17 5.0 4.5 intergenic CG11380 + chrX_27_1195001 chrX_1195001 0.33 EF39_1-HE 577 chrX 1664441 1664572 blood 7009 7386 9 131 '7-2 68.07 1.9 3.1 intron Mur2B - chrX_9_1660001 chrX_1660001 0.78 EF39_1-HE 578 chrX 1725149 1725258 I-element 2 5349 15 109 '11-4 66.02 6.5 2.0 intergenic not near genes chrX_15_1725001 chrX_1725001 0.73 EF39_1-HE 579 chrX 1798308 1798341 hopper 1380 1413 7 33 '4-3 56.17 6.4 0.9 intron CG42666 + chrX_7_1795001 chrX_1795001 0.57 EF39_1-HE 580 chrX 1830100 1830228 roo 8667 407 44 128 '13-31 66.42 6.2 6.1 intron CG42666 + chrX_44_1830001 chrX_1830001 0.30 EF39_1-HE 581 chrX 1903948 1903999 jockey 18 71 9 51 '2-7 68.95 6.8 1.2 3` UTR Edem1 - chrX_9_1900001 chrX_1900001 0.22 EF39_1-HE 582 chrX 2530436 2530596 pogo 2097 2 19 160 '11-8 60.58 4.8 3.3 intron trol - chrX_19_2530001 chrX_2530001 0.58 EF39_1-HE 583 chrX 2657285 2657408 pogo 2089 1 31 123 '12-19 66.50 7.0 3.9 intron sgg + chrX_31_2655001 chrX_2655001 0.39 EF39_1-HE 584 chrX 2804782 2804834 hopper 1362 1414 18 52 '7-11 66.60 3.5 4.0 intron kirre + chrX_18_2800001 chrX_2800001 0.39 EF39_1-HE 585 chrX 3333378 3333489 pogo 2094 11 5 111 '4-1 66.68 1.5 2.0 intron,intron dnc +,CR44886 - chrX_5_3330001 chrX_3330001 0.80 EF39_1-HE 586 chrX 3635970 3636056 mdg1 7458 46 9 86 '5-4 67.99 5.9 1.3 intron AstA-R1 + chrX_9_3635001 chrX_3635001 0.56 EF39_1-HE 587 chrX 3658627 3658744 hobo 7 2935 11 117 '5-6 65.48 3.3 2.6 intron AstA-R1 + chrX_11_3655001 chrX_3655001 0.45 EF39_1-HE 588 chrX 3689068 3689190 P-element 1 2880 47 122 '29-18 48.56 6.8 6.0 intron Mnt + chrX_47_3685001 chrX_3685001 0.62 EF39_1-HE 589 chrX 3722822 3723095 FB 16 485 7 273 '6-1 62.98 1.2 3.2 intron tlk + chrX_7_3720001 chrX_3720001 0.86 EF39_1-HE 590 chrX 4133526 4133760 412 55 7179 10 234 '9-1 63.86 2.7 2.7 3` UTR Fas2 - chrX_10_4130001 chrX_4130001 0.90 EF39_1-HE 591 chrX 4211666 4211790 FB 1 4 8 124 '4-4 65.30 1.6 3.1 intergenic not near genes chrX_8_4210001 chrX_4210001 0.50 EF39_1-HE 592 chrX 4338574 4338692 flea 248 4765 27 118 '13-14 68.18 6.1 3.8 intron norpA + chrX_27_4335001 chrX_4335001 0.48 EF39_1-HE 593 chrX 4792812 4792858 jockey 4567 4521 9 46 '5-4 64.80 4.1 1.8 intergenic not near genes chrX_9_4790001 chrX_4790001 0.56 EF39_1-HE 594 chrX 5113258 5113382 hobo 2709 5 14 124 '2-12 63.90 5.4 2.2 intron,intron CG15465 +,rg + chrX_14_5110001 chrX_5110001 0.14 EF39_1-HE 595 chrX 5148641 5148760 invader3 5189 5463 30 119 '7-23 64.18 5.1 4.9 intron,intron CG15465 +,rg + chrX_30_5145001 chrX_5145001 0.23 EF39_1-HE 596 chrX 5244849 5244967 hobo 2936 5 21 118 '8-13 63.35 6.8 2.7 intron,intron CG15465 +,rg + chrX_21_5240001 chrX_5240001 0.38 EF39_1-HE 597 chrX 5518609 5518713 412 468 4 13 104 '7-6 64.88 3.6 2.8 3` UTR CG12730 + chrX_13_5515001 chrX_5515001 0.54 EF39_1-HE 598 chrX 5831587 5831718 roo 8665 408 27 131 '9-18 67.72 4.5 4.9 intron CG15765 + chrX_27_5830001 chrX_5830001 0.33 EF39_1-HE 599 chrX 5886894 5887011 P-element 10 3 34 117 '16-18 48.10 3.9 6.9 intron CR45668 - chrX_34_5885001 chrX_5885001 0.47 EF39_1-HE 600 chrX 6186097 6186135 Doc 4461 4499 12 38 '9-3 60.87 10.2 1.1 intron Ca-alpha1T - chrX_12_6185001 chrX_6185001 0.75 EF39_1-HE 601 chrX 6737615 6737740 hopper 4 1412 18 125 '7-11 61.83 5.5 2.8 intron CG3168 - chrX_18_6735001 chrX_6735001 0.39 EF39_1-HE 602 chrX 6883899 6884019 1360 3385 5 25 120 '12-13 68.94 5.9 3.6 intergenic not near genes chrX_25_6880001 chrX_6880001 0.48 EF39_1-HE 603 chrX 7060446 7060551 hobo 2919 2 10 105 '9-1 65.22 5.9 1.4 intron CG12541 - chrX_10_7060001 chrX_7060001 0.90 EF39_1-HE 604 chrX 7154121 7154192 hobo 2887 3 13 71 '2-11 64.43 2.8 3.4 intron CG9650 + chrX_13_7150001 chrX_7150001 0.15 EF39_1-HE 605 chrX 7456890 7457204 jockey 11 4783 32 314 '31-1 60.99 5.7 4.8 intergenic not near genes chrX_32_7455001 chrX_7455001 0.97 EF39_1-HE 606 chrX 7621996 7622252 Ivk 5374 5 69 256 '68-1 67.40 14.5 4.5 intron ct + chrX_69_7620001 chrX_7620001 0.99 EF39_1-HE 607 chrX 7742199 7742320 hobo 2709 11 18 121 '7-11 64.69 4.9 3.1 intergenic not near genes chrX_18_7740001 chrX_7740001 0.39 EF39_1-HE 608 chrX 7855177 7855283 roo 8666 409 11 106 '5-6 53.32 4.5 2.0 intergenic not near genes chrX_11_7855001 chrX_7855001 0.45 EF39_1-HE 609 chrX 8027415 8027519 Juan 4203 6 11 104 '6-5 63.96 5.2 1.8 intergenic Tbh + chrX_11_8025001 chrX_8025001 0.55 EF39_1-HE 610 chrX 8038394 8038494 Stalker4 6958 386 5 100 '3-2 60.80 3.1 1.2 3` UTR fs(1)h - chrX_5_8035001 chrX_8035001 0.60 EF39_1-HE 611 chrX 8234006 8234125 invader4 319 11 20 119 '13-7 58.89 3.7 4.3 intron sdt + chrX_20_8230001 chrX_8230001 0.65 EF39_1-HE 612 chrX 8325664 8325768 roo 23 403 23 104 '7-16 67.53 2.2 7.2 intron nAChRalpha3 - chrX_23_8325001 chrX_8325001 0.30 EF39_1-HE 613 chrX 8336563 8336700 FB 690 8 5 137 '3-2 70.50 1.1 2.4 intron nAChRalpha3 - chrX_5_8335001 chrX_8335001 0.60 EF39_1-HE 614 chrX 8894089 8894247 P-element 2875 2867 10 158 '3-7 43.39 2.7 2.7 intron Moe - chrX_10_8890001 chrX_8890001 0.30 EF39_1-HE 615 chrX 8911917 8912029 pogo 2080 1 7 112 '3-4 55.32 1.0 3.5 intron rdgA + chrX_7_8910001 chrX_8910001 0.43 EF39_1-HE 616 chrX 8938071 8938205 roo 410 8664 32 134 '26-6 65.52 6.5 4.3 intron rdgA + chrX_32_8935001 chrX_8935001 0.81 EF39_1-HE 617 chrX 9387447 9387568 hobo 2 2932 13 121 '7-6 66.11 1.4 5.4 intron mgl - chrX_13_9385001 chrX_9385001 0.54 EF39_1-HE 618 chrX 9816721 9816848 1731 4316 4623 42 127 '13-29 62.94 9.5 4.0 intron CG32698 + chrX_42_9815001 chrX_9815001 0.31 EF39_1-HE 619 chrX 9902562 9902849 hobo 2467 7 15 287 '1-14 65.25 4.1 2.9 intergenic not near genes chrX_15_9900001 chrX_9900001 0.07 EF39_1-HE 620 chrX 10181767 10181877 297 387 10 21 110 '16-5 65.89 2.4 6.2 intron,intron CR44894 -,CG43902 + chrX_21_10180001 chrX_10180001 0.76 EF39_1-HE 621 chrX 10637596 10637684 roo 9052 25 7 88 '5-2 58.84 1.3 3.0 intron X11Lbeta + chrX_7_10635001 chrX_10635001 0.71 EF39_1-HE 622 chrX 10638950 10639056 FB 15 8 11 106 '6-5 62.26 1.6 4.2 intron X11Lbeta + chrX_11_10635001 chrX_10635001 0.55 EF39_1-HE 623 chrX 11009921 11010017 hobo 2916 11 9 96 '5-4 68.74 5.0 1.5 intron CG42339 - chrX_9_11005001 chrX_11005001 0.56 EF39_1-HE 624 chrX 11025476 11025601 hopper 5 3 34 125 '18-16 63.77 6.4 4.6 intron CG42339 - chrX_34_11025001 chrX_11025001 0.53 EF39_1-HE 625 chrX 11042564 11042615 jockey 78 26 11 51 '8-3 64.06 7.3 1.3 intergenic not near genes chrX_11_11040001 chrX_11040001 0.73 EF39_1-HE 626 chrX 11206468 11206599 HMS-Beagle 7040 6797 19 131 '14-5 67.76 2.5 5.4 intergenic not near genes chrX_19_11205001 chrX_11205001 0.74 EF39_1-HE 627 chrX 11233066 11233176 hopper 1395 1412 20 110 '10-10 62.07 4.1 3.9 intron CG44422 - chrX_20_11230001 chrX_11230001 0.50 EF39_1-HE 628 chrX 11366212 11366339 pogo 3 2095 28 127 '13-15 64.72 4.3 5.3 intron hop - chrX_28_11365001 chrX_11365001 0.46 EF39_1-HE 629 chrX 11472200 11472243 mdg3 5459 250 14 43 '8-6 56.16 5.5 2.2 intron CG43155 + chrX_14_11470001 chrX_11470001 0.57 EF39_1-HE 630 chrX 11759425 11759545 gypsy 7436 6988 18 120 '4-14 65.95 5.5 2.8 intron m + chrX_18_11755001 chrX_11755001 0.22 EF39_1-HE 631 chrX 12117703 12117820 flea 5011 4765 20 117 '14-6 64.26 4.9 3.4 intron Ten-a + chrX_20_12115001 chrX_12115001 0.70 EF39_1-HE 632 chrX 12231083 12231194 roo 19 405 19 111 '2-17 65.03 3.0 4.8 intron Ten-a + chrX_19_12230001 chrX_12230001 0.11 EF39_1-HE 633 chrX 12419849 12419978 mdg1 420 7041 21 129 '11-10 65.60 1.6 8.1 intergenic not near genes chrX_21_12415001 chrX_12415001 0.52 EF39_1-HE 634 chrX 12539228 12539337 accord 7100 7029 4 109 '2-2 65.10 5.2 0.6 intron CG43921 - chrX_4_12535001 chrX_12535001 0.50 EF39_1-HE 635 chrX 12696095 12696147 jockey 15 68 12 52 '8-4 66.11 11.5 1.0 intron Smr - chrX_12_12695001 chrX_12695001 0.67 EF39_1-HE 636 chrX 12703184 12703484 Tirant 79 8498 39 300 '1-38 68.99 9.7 3.6 intron Smr - chrX_39_12700001 chrX_12700001 0.03 EF39_1-HE 637 chrX 12881919 12882021 hopper 18 3 4 102 '3-1 60.96 1.4 1.7 intron Pde9 - chrX_4_12880001 chrX_12880001 0.75 EF39_1-HE 638 chrX 12919745 12919785 jockey 6 10 11 40 '6-5 58.76 12.4 0.8 intron fne + chrX_11_12915001 chrX_12915001 0.55 EF39_1-HE 639 chrX 13134833 13134940 BS 5085 5012 15 107 '7-8 56.17 4.0 3.0 intergenic CG15717 +,MFS10 + chrX_15_13130001 chrX_13130001 0.47 EF39_1-HE 640 chrX 13505405 13505436 I-element 5343 5312 8 31 '4-4 59.78 10.7 0.7 intron Neto + chrX_8_13505001 chrX_13505001 0.50 EF39_1-HE 641 chrX 13573563 13573944 3S18 37 5879 8 381 '7-1 66.70 2.9 2.1 intron Tango13 + chrX_8_13570001 chrX_13570001 0.88 EF39_1-HE 642 chrX 14772121 14772179 jockey 4724 4666 13 58 '4-9 64.61 8.1 1.4 intergenic not near genes chrX_13_14770001 chrX_14770001 0.31 EF39_1-HE 643 chrX 14908233 14908353 roo 8661 406 14 120 '13-1 53.28 4.9 2.4 intron,exon Flo2 +,CG9509 - chrX_14_14905001 chrX_14905001 0.93 EF39_1-HE 644 chrX 14957023 14957079 jockey 4729 4673 17 56 '8-9 62.40 7.6 2.0 intron eag + chrX_17_14955001 chrX_14955001 0.47 EF39_1-HE 645 chrX 14989077 14989123 hobo 4 50 13 46 '5-8 66.42 36.5 0.3 intron eag + chrX_13_14985001 chrX_14985001 0.38 EF39_1-HE 646 chrX 15047681 15047807 roo 8663 401 7 126 '4-3 67.05 4.4 1.3 intron,intron hiw -,CG5541 + chrX_7_15045001 chrX_15045001 0.57 EF39_1-HE 647 chrX 15247775 15247896 roo 5 402 32 121 '11-21 65.26 6.2 4.4 intergenic not near genes chrX_32_15245001 chrX_15245001 0.34 EF39_1-HE 648 chrX 15276377 15276501 hobo 2935 2 16 124 '15-1 64.48 6.4 2.2 intergenic not near genes chrX_16_15275001 chrX_15275001 0.94 EF39_1-HE 649 chrX 15371329 15371456 invader3 5462 5192 25 127 '16-9 60.51 6.5 3.3 intron acj6 - chrX_25_15370001 chrX_15370001 0.64 EF39_1-HE 650 chrX 15819381 15819676 hobo 2709 430 22 295 '20-2 66.82 5.7 3.3 intron sd + chrX_22_15815001 chrX_15815001 0.91 EF39_1-HE 651 chrX 16420663 16420796 opus 494 110 13 133 '8-5 67.68 3.8 2.7 intron AnxB11 - chrX_13_16420001 chrX_16420001 0.62 EF39_1-HE 652 chrX 16520614 16520736 412 2 491 51 122 '29-22 63.89 13.8 3.4 intron para - chrX_51_16520001 chrX_16520001 0.57 EF39_1-HE 653 chrX 16911470 16911852 Transpac 4 276 39 382 '38-1 66.97 9.0 3.9 intron CR44754 - chrX_39_16910001 chrX_16910001 0.97 EF39_1-HE 654 chrX 17332791 17332926 HMS-Beagle 6796 247 46 135 '25-21 67.59 8.2 5.0 intergenic not near genes chrX_46_17330001 chrX_17330001 0.54 EF39_1-HE 655 chrX 17698676 17698796 P-element 2880 2886 19 120 '6-13 51.61 4.1 3.7 5` UTR chas - chrX_19_17695001 chrX_17695001 0.32 EF39_1-HE 656 chrX 17816601 17816738 INE-1 549 552 4 137 '1-3 51.22 2.5 1.1 intergenic not near genes chrX_4_17815001 chrX_17815001 0.25 EF39_1-HE 657 chrX 18150512 18150546 hobo 36 2 12 34 '10-2 63.50 8.8 1.2 intergenic not near genes chrX_12_18150001 chrX_18150001 0.83 EF39_1-HE 658 chrX 18171927 18172047 hobo 2935 5 30 120 '14-16 64.83 7.4 3.6 3` UTR Frq1 + chrX_30_18170001 chrX_18170001 0.47 EF39_1-HE 659 chrX 18243582 18243649 P-element 2826 2885 20 67 '8-12 49.99 8.9 2.0 intergenic upd2 - chrX_20_18240001 chrX_18240001 0.40 EF39_1-HE 660 chrX 18318512 18318647 roo 8662 409 31 135 '7-24 67.92 7.3 3.7 intron CG6023 - chrX_31_18315001 chrX_18315001 0.23 EF39_1-HE 661 chrX 18319977 18320091 jockey 4993 109 35 114 '7-28 65.54 9.2 3.4 intron CG6023 - chrX_35_18315001 chrX_18315001 0.20 EF39_1-HE 662 chrX 18420262 18420390 roo 407 8664 28 128 '17-11 69.52 8.2 3.0 intergenic not near genes chrX_28_18420001 chrX_18420001 0.61 EF39_1-HE 663 chrX 18924127 18924257 pogo 2098 3 22 130 '13-9 67.46 4.2 4.2 intergenic not near genes chrX_22_18920001 chrX_18920001 0.59 EF39_1-HE 664 chrX 18934307 18934352 Doc 6 52 15 45 '7-8 65.12 12.6 1.1 intron CG43759 + chrX_15_18930001 chrX_18930001 0.47 EF39_1-HE 665 chrX 19034082 19034213 hopper 1 1414 10 131 '4-6 64.83 4.4 1.9 intergenic not near genes chrX_10_19030001 chrX_19030001 0.40 EF39_1-HE 666 chrX 19375142 19375171 Quasimodo 10 39 12 29 '6-6 65.60 22.3 0.5 intron kek5 + chrX_12_19375001 chrX_19375001 0.50 EF39_1-HE 667 chrX 19402131 19402174 297 6625 6582 20 43 '8-12 69.30 12.1 1.5 intron kek5 + chrX_20_19400001 chrX_19400001 0.40 EF39_1-HE 668 chrX 19472054 19472099 jockey 12 58 10 45 '8-2 61.92 4.4 1.9 intergenic kek5 + chrX_10_19470001 chrX_19470001 0.80 EF39_1-HE 669 chrX 19740234 19740364 pogo 2 2097 11 130 '6-5 69.55 4.1 2.2 3` UTR CG14234 + chrX_11_19740001 chrX_19740001 0.55 EF39_1-HE 670 chrX 19820623 19820789 Rt1b 4967 4980 11 166 '4-7 69.63 9.5 1.0 intergenic not near genes chrX_11_19820001 chrX_19820001 0.36 EF39_1-HE 671 chrX 19992971 19993092 hopper 1414 3 17 121 '8-9 59.79 6.2 2.4 intergenic not near genes chrX_17_19990001 chrX_19990001 0.47 EF39_1-HE 672 chrX 20122721 20122854 blood 7388 7010 19 133 '11-8 67.02 6.5 2.5 intron CG34331 + chrX_19_20120001 chrX_20120001 0.58 EF39_1-HE 673 chrX 20760926 20761053 flea 4755 5006 27 127 '13-14 67.10 6.4 3.6 3` UTR CR43838 - chrX_27_20760001 chrX_20760001 0.48 EF39_1-HE 674 chrX 20999508 20999602 BS 5076 1 23 94 '2-21 63.99 6.2 3.2 intergenic not near genes chrX_23_20995001 chrX_20995001 0.09 EF39_1-HE 675 chrX 21073779 21073834 G-element 4303 4246 21 55 '14-7 65.06 9.5 2.0 intron bves + chrX_21_21070001 chrX_21070001 0.67 EF39_1-HE 676 chrX 21087563 21087680 mdg3 5260 240 19 117 '18-1 62.34 0.7 11.2 intergenic not near genes chrX_19_21085001 chrX_21085001 0.95 EF39_1-HE 677 chrX 21907789 21907830 Stalker 227 185 6 41 '3-3 64.41 0.0 6.0 intergenic not near genes chrX_6_21905001 chrX_21905001 0.50 EF39_1-HE 678 chrX 21933186 21933322 gtwin 477 6916 37 136 '22-15 65.58 2.5 10.6 intergenic not near genes chrX_37_21930001 chrX_21930001 0.59 EF39_1-HE 679 chrX 22426159 22426232 1731 296 4352 5 73 '2-3 63.96 4.6 0.9 intergenic not near genes chrX_5_22425001 chrX_22425001 0.40 EF39_1-HE 680 chrX 22484907 22485102 INE-1 93 543 4 195 '3-1 71.79 1.8 1.4 intron Cp110 + chrX_4_22480001 chrX_22480001 0.75 EF39_1-HE 681 chrX 22576297 22576488 Burdock 192 6288 4 191 '1-3 72.42 1.3 1.7 intergenic not near genes chrX_4_22575001 chrX_22575001 0.25 EF39_1-HE 682 chrX 22777307 22777428 roo 8662 407 8 121 '4-4 62.26 1.4 3.3 intron CR44997 + chrX_8_22775001 chrX_22775001 0.50 EF39_1-HE 683 chrX 22782295 22782422 hopper 1413 1411 22 127 '7-15 66.21 7.5 2.6 intron CR44997 + chrX_22_22780001 chrX_22780001 0.32 EF39_1-HE 684 chrX 23108307 23108338 BS3 1441 1410 10 31 '4-6 57.92 11.9 0.8 3` UTR ATbp + chrX_10_23105001 chrX_23105001 0.40 EF39_1-HE 685 chrY 424972 425019 McClintock 470 422 6 47 '3-3 66.78 0.0 6.0 intergenic not near genes chrY_6_420001 chrY_420001 0.50 EF39_1-HE