SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 46344 46377 chr2L 46433 46481 12 103 2.0 3.0 2.5 3.4 137 chr2L 46344 intron Cda5 - chr2L 46412 intron Cda5 - chr2L 46481 intron Cda5 - chr2L_12_45001 chr2L_45001 EF39_1-HE 2 chr2L 47440 47481 chr2L 52571 52611 jockey 25 5131 12.0 8.0 10.0 2.3 5171 chr2L 47440 intron Cda5 - chr2L 50026 intron Cda5 - chr2L 52611 intron Cda5 - chr2L_25_50001 chr2L_50001 EF39_1-HE 3 chr2L 89692 89738 chr2L 89795 89841 10 103 5.5 3.5 4.5 1.8 149 chr2L 89692 intergenic not near genes chr2L 89766 intergenic not near genes chr2L 89841 intergenic not near genes chr2L_10_85001 chr2L_85001 EF39_1-HE 4 chr2L 297669 297708 chr2L 297795 297834 6 126 1.5 1.5 1.5 2.4 165 chr2L 297669 intergenic Pi3K21B +,Hop + chr2L 297752 intergenic Pi3K21B +,Hop + chr2L 297834 intergenic Pi3K21B +,Hop + chr2L_6_295001 chr2L_295001 EF39_1-HE 5 chr2L 311664 311711 chr2L 311976 312023 4 311 3.0 2.5 2.8 1.1 359 chr2L 311664 intron Plc21C + chr2L 311844 intron Plc21C + chr2L 312023 intron Plc21C + chr2L_4_310001 chr2L_310001 EF39_1-HE 6 chr2L 325112 325147 chr2L 325215 325248 14 103 5.0 8.0 6.5 1.9 136 chr2L 325112 intron Plc21C + chr2L 325180 intron Plc21C + chr2L 325248 intron Plc21C + chr2L_14_325001 chr2L_325001 EF39_1-HE 7 chr2L 332782 332802 chr2L 332917 332937 7 135 2.5 6.0 4.2 1.3 155 chr2L 332782 intron Plc21C + chr2L 332860 intron Plc21C + chr2L 332937 intron Plc21C + chr2L_7_330001 chr2L_330001 EF39_1-HE 8 chr2L 347867 347908 chr2L 355393 355434 blood 11 7526 3.5 4.0 3.8 2.3 7567 chr2L 347867 3` UTR Plc21C + chr2L 351650 intron Plc21C + chr2L 355434 3` UTR Plc21C + chr2L_11_350001 chr2L_350001 EF39_1-HE 9 chr2L 371423 371447 chr2L 371528 371552 7 104 5.0 5.5 5.2 1.1 129 chr2L 371423 intergenic not near genes chr2L 371488 intergenic not near genes chr2L 371552 intergenic not near genes chr2L_7_370001 chr2L_370001 EF39_1-HE 10 chr2L 544807 544846 chr2L 544916 544955 6 109 1.0 2.5 1.8 2.1 148 chr2L 544807 intergenic Ets21C -,Spp -,nAChRbeta3 + chr2L 544881 intergenic Ets21C -,Spp -,nAChRbeta3 + chr2L 544955 3` UTR Ets21C - chr2L_6_540001 chr2L_540001 EF39_1-HE 11 chr2L 681635 681691 chr2L 681744 681800 12 109 4.5 6.0 5.2 1.9 165 chr2L 681635 intron ds - chr2L 681718 intron ds - chr2L 681800 intron ds - chr2L_12_680001 chr2L_680001 EF39_1-HE 12 chr2L 686914 686945 chr2L 695977 696011 roo 8 9066 3.5 6.0 4.8 1.4 9097 chr2L 686914 intron ds - chr2L 691462 intron ds - chr2L 696011 intron ds - chr2L_8_690001 chr2L_690001 EF39_1-HE 13 chr2L 740047 740082 chr2L 740154 740189 12 107 0.0 7.5 3.8 2.5 142 chr2L 740047 intron Eaat2 - chr2L 740118 intron Eaat2 - chr2L 740189 intron Eaat2 - chr2L_12_740001 chr2L_740001 EF39_1-HE 14 chr2L 749576 749618 chr2L 749686 749730 12 110 5.0 4.5 4.8 2.1 154 chr2L 749576 intergenic GABA-B-R3 + chr2L 749653 intergenic GABA-B-R3 + chr2L 749730 intergenic GABA-B-R3 + chr2L_12_745001 chr2L_745001 EF39_1-HE 15 chr2L 764556 764581 chr2L 764658 764688 4 106 1.5 3.0 2.2 1.2 132 chr2L 764556 intergenic not near genes chr2L 764622 intergenic not near genes chr2L 764688 intergenic not near genes chr2L_4_760001 chr2L_760001 EF39_1-HE 16 chr2L 770445 770493 chr2L 772252 772299 Bari1 10 1807 3.5 6.5 5.0 1.7 1854 chr2L 770445 intergenic not near genes chr2L 771372 intergenic not near genes chr2L 772299 intergenic CR44614 + chr2L_10_770001 chr2L_770001 EF39_1-HE 17 chr2L 828620 828645 chr2L 828758 828783 8 138 4.5 2.5 3.5 1.8 163 chr2L 828620 intron dock + chr2L 828702 intron dock + chr2L 828783 intron dock + chr2L_8_825001 chr2L_825001 EF39_1-HE 18 chr2L 853322 853350 chr2L 853410 853462 5 107 2.5 0.0 1.2 2.3 140 chr2L 853322 intron kraken + chr2L 853392 intron kraken + chr2L 853462 intron kraken + chr2L_5_850001 chr2L_850001 EF39_1-HE 19 chr2L 922441 922496 chr2L 922548 922603 13 107 1.5 5.0 3.2 3.1 162 chr2L 922441 intergenic CG4341 + chr2L 922522 intergenic CG4341 + chr2L 922603 intergenic CG4341 + chr2L_13_920001 chr2L_920001 EF39_1-HE 20 chr2L 935935 935973 chr2L 936040 936078 10 105 1.5 4.0 2.8 2.6 143 chr2L 935935 intron CG4341 + chr2L 936006 intron CG4341 + chr2L 936078 intron CG4341 + chr2L_10_935001 chr2L_935001 EF39_1-HE 21 chr2L 953471 953526 chr2L 953581 953637 16 111 1.5 3.0 2.2 5.0 166 chr2L 953471 exon CG4341 + chr2L 953554 intron CG4341 + chr2L 953637 intron CG4341 + chr2L_16_950001 chr2L_950001 EF39_1-HE 22 chr2L 969142 969161 chr2L 969277 969296 7 135 3.5 5.0 4.2 1.3 154 chr2L 969142 intergenic not near genes chr2L 969219 intergenic not near genes chr2L 969296 intergenic not near genes chr2L_7_965001 chr2L_965001 EF39_1-HE 23 chr2L 973848 973871 chr2L 974005 974028 4 156 2.5 3.0 2.8 1.1 180 chr2L 973848 intergenic not near genes chr2L 973938 intergenic not near genes chr2L 974028 intergenic not near genes chr2L_4_970001 chr2L_970001 EF39_1-HE 24 chr2L 976858 976911 chr2L 984520 984573 roo 10 7662 1.5 4.0 2.8 2.6 7715 chr2L 976858 intergenic not near genes chr2L 980716 intergenic not near genes chr2L 984573 intergenic not near genes chr2L_10_980001 chr2L_980001 EF39_1-HE 25 chr2L 996704 996716 chr2L 1005825 1005837 roo 4 9121 1.5 0.0 0.8 2.2 9133 chr2L 996704 intergenic not near genes chr2L 1001270 intergenic not near genes chr2L 1005837 intergenic not near genes chr2L_4_1000001 chr2L_1000001 EF39_1-HE 26 chr2L 1090363 1090387 chr2L 1090479 1090503 5 116 0.0 2.5 1.2 2.3 140 chr2L 1090363 intron CG4629 - chr2L 1090433 intron CG4629 - chr2L 1090503 intron CG4629 - chr2L_5_1090001 chr2L_1090001 EF39_1-HE 27 chr2L 1096522 1096574 chr2L 1096629 1096668 8 105 3.0 0.5 1.8 2.9 146 chr2L 1096522 intron CG4629 - chr2L 1096595 intron CG4629 - chr2L 1096668 intron CG4629 - chr2L_8_1095001 chr2L_1095001 EF39_1-HE 28 chr2L 1122019 1122079 chr2L 1122288 1122347 12 268 0.5 6.0 3.2 2.9 328 chr2L 1122019 intron Pino - chr2L 1122183 intron Pino - chr2L 1122347 intron Pino - chr2L_12_1120001 chr2L_1120001 EF39_1-HE 29 chr2L 1156878 1156890 chr2L 1157025 1157037 4 146 2.5 1.5 2.0 1.3 159 chr2L 1156878 intron capt - chr2L 1156958 intron capt - chr2L 1157037 intron capt - chr2L_4_1155001 chr2L_1155001 EF39_1-HE 30 chr2L 1164230 1164273 chr2L 1164342 1164384 6 112 4.0 3.0 3.5 1.3 154 chr2L 1164230 intergenic IntS14 +,CG5080 - chr2L 1164307 intergenic IntS14 +,CG5080 - chr2L 1164384 intergenic IntS14 +,CG5080 - chr2L_6_1160001 chr2L_1160001 EF39_1-HE 31 chr2L 1199854 1199859 chr2L 1199988 1199993 4 134 5.0 8.5 6.8 0.5 139 chr2L 1199854 3` UTR CG43348 + chr2L 1199924 3` UTR CG43348 + chr2L 1199993 intergenic CG43348 +,CG43349 + chr2L_4_1195001 chr2L_1195001 EF39_1-HE 32 chr2L 1220111 1220124 chr2L 1227603 1227616 blood 5 7492 7.5 3.5 5.5 0.8 7505 chr2L 1220111 intron CG42329 + chr2L 1223864 intron CG42329 + chr2L 1227616 intron CG42329 + chr2L_5_1220001 chr2L_1220001 EF39_1-HE 33 chr2L 1220125 1220157 chr2L 1227596 1227649 blood 10 7490 2.0 3.0 2.5 2.9 7524 chr2L 1220125 intron CG42329 + chr2L 1223887 intron CG42329 + chr2L 1227649 intron CG42329 + chr2L_10_1220001 chr2L_1220001 EF39_1-HE 34 chr2L 1237971 1237998 chr2L 1238081 1238108 12 110 3.5 3.0 3.2 2.9 137 chr2L 1237971 intergenic not near genes chr2L 1238040 intergenic not near genes chr2L 1238108 intergenic not near genes chr2L_12_1235001 chr2L_1235001 EF39_1-HE 35 chr2L 1261209 1261259 chr2L 1261316 1261366 21 107 2.5 6.5 4.5 3.8 157 chr2L 1261209 intron robo3 + chr2L 1261288 intron robo3 + chr2L 1261366 intron robo3 + chr2L_21_1260001 chr2L_1260001 EF39_1-HE 36 chr2L 1312841 1312900 chr2L 1312954 1313013 13 113 6.0 5.0 5.5 2.0 172 chr2L 1312841 intergenic not near genes chr2L 1312927 intergenic not near genes chr2L 1313013 intergenic not near genes chr2L_13_1310001 chr2L_1310001 EF39_1-HE 37 chr2L 1316995 1317038 chr2L 1317309 1317356 12 318 3.0 4.0 3.5 2.7 361 chr2L 1316995 intergenic not near genes chr2L 1317176 intergenic not near genes chr2L 1317356 intergenic not near genes chr2L_12_1315001 chr2L_1315001 EF39_1-HE 38 chr2L 1328390 1328441 chr2L 1328559 1328595 14 167 4.5 2.5 3.5 3.1 205 chr2L 1328390 intergenic not near genes chr2L 1328492 intergenic not near genes chr2L 1328595 intergenic not near genes chr2L_14_1325001 chr2L_1325001 EF39_1-HE 39 chr2L 1333704 1333753 chr2L 1333856 1333904 5 152 0.0 1.0 0.5 3.3 200 chr2L 1333704 intergenic CG5440 + chr2L 1333804 intergenic CG5440 + chr2L 1333904 intergenic CG5440 + chr2L_5_1330001 chr2L_1330001 EF39_1-HE 40 chr2L 1399159 1399193 chr2L 1399283 1399317 14 124 0.5 6.5 3.5 3.1 158 chr2L 1399159 intron lea - chr2L 1399238 intron lea - chr2L 1399317 intron lea - chr2L_14_1395001 chr2L_1395001 EF39_1-HE 41 chr2L 1429113 1429151 chr2L 1429226 1429264 7 113 2.5 2.5 2.5 2.0 151 chr2L 1429113 3` UTR CG43401 + chr2L 1429188 intergenic CG43401 + chr2L 1429264 intergenic CG43401 + chr2L_7_1425001 chr2L_1425001 EF39_1-HE 42 chr2L 1458220 1458263 chr2L 1458323 1458366 12 103 5.0 5.5 5.2 1.9 146 chr2L 1458220 intergenic not near genes chr2L 1458293 intergenic not near genes chr2L 1458366 intergenic not near genes chr2L_12_1455001 chr2L_1455001 EF39_1-HE 43 chr2L 1464067 1464080 chr2L 1464351 1464364 4 284 1.5 3.0 2.2 1.2 297 chr2L 1464067 intergenic not near genes chr2L 1464216 intergenic not near genes chr2L 1464364 intergenic not near genes chr2L_4_1460001 chr2L_1460001 EF39_1-HE 44 chr2L 1468021 1468068 chr2L 1468163 1468204 9 140 4.5 4.5 4.5 1.6 183 chr2L 1468021 intergenic not near genes chr2L 1468112 intergenic not near genes chr2L 1468204 intergenic not near genes chr2L_9_1465001 chr2L_1465001 EF39_1-HE 45 chr2L 1532071 1532082 chr2L 1532173 1532184 5 102 9.0 5.5 7.2 0.6 113 chr2L 1532071 intergenic not near genes chr2L 1532128 intergenic not near genes chr2L 1532184 intergenic not near genes chr2L_5_1530001 chr2L_1530001 EF39_1-HE 46 chr2L 1548691 1548746 chr2L 1548877 1548932 14 186 5.5 3.5 4.5 2.5 241 chr2L 1548691 intergenic not near genes chr2L 1548812 intergenic not near genes chr2L 1548932 intergenic not near genes chr2L_14_1545001 chr2L_1545001 EF39_1-HE 47 chr2L 1570667 1570718 chr2L 1573565 1573616 F-element 25 2897 7.0 10.5 8.8 2.6 2949 chr2L 1570667 intron haf + chr2L 1572142 intron haf + chr2L 1573616 intron haf + chr2L_25_1570001 chr2L_1570001 EF39_1-HE 48 chr2L 1575854 1575908 chr2L 1576014 1576068 24 160 4.0 4.5 4.2 4.6 214 chr2L 1575854 intron haf + chr2L 1575961 intron haf + chr2L 1576068 intron haf + chr2L_24_1575001 chr2L_1575001 EF39_1-HE 49 chr2L 1579567 1579577 chr2L 1579672 1579684 5 107 7.5 0.5 4.0 1.0 117 chr2L 1579567 intron haf + chr2L 1579626 intron haf + chr2L 1579684 intron haf + chr2L_5_1575001 chr2L_1575001 EF39_1-HE 50 chr2L 1615383 1615415 chr2L 1615491 1615523 12 108 1.0 5.0 3.0 3.0 140 chr2L 1615383 intergenic not near genes chr2L 1615453 intergenic not near genes chr2L 1615523 intergenic not near genes chr2L_12_1615001 chr2L_1615001 EF39_1-HE 51 chr2L 1620276 1620294 chr2L 1620365 1620396 8 100 0.0 6.5 3.2 1.9 120 chr2L 1620276 3` UTR CR44603 - chr2L 1620336 3` UTR CR44603 - chr2L 1620396 3` UTR CR44603 - chr2L_8_1620001 chr2L_1620001 EF39_1-HE 52 chr2L 1634745 1634763 chr2L 1634860 1634878 4 115 8.5 11.5 10.0 0.4 133 chr2L 1634745 intergenic not near genes chr2L 1634812 intergenic not near genes chr2L 1634878 intergenic not near genes chr2L_4_1630001 chr2L_1630001 EF39_1-HE 53 chr2L 1636281 1636336 chr2L 1636397 1636452 14 116 4.5 4.0 4.2 2.7 171 chr2L 1636281 intergenic not near genes chr2L 1636366 intergenic not near genes chr2L 1636452 intergenic not near genes chr2L_14_1635001 chr2L_1635001 EF39_1-HE 54 chr2L 1678949 1679004 chr2L 1686440 1686495 blood 18 7491 3.5 6.0 4.8 3.1 7546 chr2L 1678949 intron chinmo + chr2L 1682722 intron chinmo + chr2L 1686495 intron chinmo + chr2L_18_1680001 chr2L_1680001 EF39_1-HE 55 chr2L 1699069 1699082 chr2L 1699185 1699198 8 116 20.5 6.5 13.5 0.6 129 chr2L 1699069 3` UTR chinmo + chr2L 1699134 3` UTR chinmo + chr2L 1699198 3` UTR chinmo + chr2L_8_1695001 chr2L_1695001 EF39_1-HE 56 chr2L 1699083 1699114 chr2L 1699180 1699230 13 115 12.5 5.5 9.0 1.3 147 chr2L 1699083 3` UTR chinmo + chr2L 1699156 3` UTR chinmo + chr2L 1699230 3` UTR chinmo + chr2L_13_1695001 chr2L_1695001 EF39_1-HE 57 chr2L 1711334 1711385 chr2L 1711684 1711735 mdg3 8 350 2.0 1.5 1.8 2.9 401 chr2L 1711334 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711534 3` UTR frtz - chr2L 1711735 3` UTR frtz - chr2L_8_1710001 chr2L_1710001 EF39_1-HE 58 chr2L 1785260 1785311 chr2L 1785425 1785478 5 165 0.5 3.0 1.8 1.8 218 chr2L 1785260 exon Gr22e + chr2L 1785369 intergenic Gr22e + chr2L 1785478 intergenic Gr22e + chr2L_5_1785001 chr2L_1785001 EF39_1-HE 59 chr2L 1946449 1946486 chr2L 1946587 1946624 6 138 2.0 2.5 2.2 1.9 175 chr2L 1946449 exon CG33673 - chr2L 1946536 intron CG33673 - chr2L 1946624 exon CG33673 - chr2L_6_1945001 chr2L_1945001 EF39_1-HE 60 chr2L 1948607 1948658 chr2L 1948738 1948793 5 133 0.0 1.5 0.8 2.8 186 chr2L 1948607 intergenic not near genes chr2L 1948700 intergenic not near genes chr2L 1948793 intergenic not near genes chr2L_5_1945001 chr2L_1945001 EF39_1-HE 61 chr2L 1956397 1956443 chr2L 1956520 1956566 14 123 0.5 0.0 0.2 11.7 169 chr2L 1956397 intron erm - chr2L 1956482 intron erm - chr2L 1956566 intron erm - chr2L_14_1955001 chr2L_1955001 EF39_1-HE 62 chr2L 2025437 2025493 chr2L 2025539 2025595 17 100 4.0 4.5 4.2 3.3 158 chr2L 2025437 intron CG4238 + chr2L 2025516 intron CG4238 + chr2L 2025595 intron CG4238 + chr2L_17_2025001 chr2L_2025001 EF39_1-HE 63 chr2L 2036633 2036674 chr2L 2036762 2036803 18 129 6.0 4.5 5.2 2.9 170 chr2L 2036633 exon lectin-22C - chr2L 2036718 exon lectin-22C - chr2L 2036803 exon lectin-22C - chr2L_18_2035001 chr2L_2035001 EF39_1-HE 64 chr2L 2049198 2049240 chr2L 2049303 2049350 6 108 0.0 4.0 2.0 2.0 152 chr2L 2049198 intergenic not near genes chr2L 2049274 intergenic not near genes chr2L 2049350 intergenic not near genes chr2L_6_2045001 chr2L_2045001 EF39_1-HE 65 chr2L 2073324 2073352 chr2L 2073433 2073461 10 106 7.5 7.5 7.5 1.2 137 chr2L 2073324 intron dpr3 - chr2L 2073392 intron dpr3 - chr2L 2073461 intron dpr3 - chr2L_10_2070001 chr2L_2070001 EF39_1-HE 66 chr2L 2100378 2100400 chr2L 2109547 2109552 roo 7 9164 7.0 8.5 7.8 0.8 9174 chr2L 2100378 intron dpr3 - chr2L 2104965 intron dpr3 - chr2L 2109552 intron dpr3 - chr2L_7_2100001 chr2L_2100001 EF39_1-HE 67 chr2L 2112085 2112143 chr2L 2119773 2119831 opus 17 7687 4.0 5.5 4.8 2.9 7746 chr2L 2112085 intergenic not near genes chr2L 2115958 intergenic not near genes chr2L 2119831 intergenic not near genes chr2L_17_2115001 chr2L_2115001 EF39_1-HE 68 chr2L 2130858 2130882 chr2L 2130985 2131006 8 126 6.0 4.0 5.0 1.3 148 chr2L 2130858 5` UTR GlyP + chr2L 2130932 5` UTR GlyP + chr2L 2131006 5` UTR GlyP + chr2L_8_2130001 chr2L_2130001 EF39_1-HE 69 chr2L 2186950 2187007 chr2L 2187057 2187114 16 107 3.0 2.5 2.8 4.2 164 chr2L 2186950 intergenic CR44066 - chr2L 2187032 3` UTR CR44066 - chr2L 2187114 3` UTR CR44066 - chr2L_16_2185001 chr2L_2185001 EF39_1-HE 70 chr2L 2203929 2203976 chr2L 2204078 2204125 13 149 0.0 3.5 1.8 4.6 196 chr2L 2203929 exon CG31668 - chr2L 2204027 exon CG31668 - chr2L 2204125 exon CG31668 - chr2L_13_2200001 chr2L_2200001 EF39_1-HE 71 chr2L 2207654 2207690 chr2L 2207760 2207797 10 107 3.0 6.5 4.8 1.7 143 chr2L 2207654 exon CG33124 - chr2L 2207726 exon CG33124 - chr2L 2207797 exon CG33124 - chr2L_10_2205001 chr2L_2205001 EF39_1-HE 72 chr2L 2250416 2250426 chr2L 2251209 2251219 4 793 4.5 0.0 2.2 1.2 803 chr2L 2250416 intergenic Ser12 - chr2L 2250818 exon Ser12 - chr2L 2251219 exon Ser12 - chr2L_4_2250001 chr2L_2250001 EF39_1-HE 73 chr2L 2272695 2272744 chr2L 2273120 2273169 15 425 3.0 4.5 3.8 3.1 474 chr2L 2272695 intron CR43753 - chr2L 2272932 intron CR43753 - chr2L 2273169 intron CR43753 - chr2L_15_2270001 chr2L_2270001 EF39_1-HE 74 chr2L 2279747 2279805 chr2L 2279855 2279913 15 107 1.0 3.5 2.2 4.7 166 chr2L 2279747 intergenic CR43753 - chr2L 2279830 intergenic CR43753 - chr2L 2279913 intergenic CR43753 - chr2L_15_2275001 chr2L_2275001 EF39_1-HE 75 chr2L 2293264 2293295 chr2L 2293382 2293413 14 118 5.0 7.0 6.0 2.0 149 chr2L 2293264 intergenic not near genes chr2L 2293338 intergenic not near genes chr2L 2293413 intergenic not near genes chr2L_14_2290001 chr2L_2290001 EF39_1-HE 76 chr2L 2294020 2294072 chr2L 2299251 2299303 copia 10 5231 6.0 6.5 6.2 1.4 5283 chr2L 2294020 intergenic not near genes chr2L 2296662 intergenic not near genes chr2L 2299303 intergenic not near genes chr2L_10_2295001 chr2L_2295001 EF39_1-HE 77 chr2L 2301848 2301870 chr2L 2301944 2301975 8 104 5.0 4.5 4.8 1.4 127 chr2L 2301848 intergenic not near genes chr2L 2301912 intergenic not near genes chr2L 2301975 intergenic not near genes chr2L_8_2300001 chr2L_2300001 EF39_1-HE 78 chr2L 2305388 2305431 chr2L 2305529 2305572 13 141 1.0 2.5 1.8 4.6 184 chr2L 2305388 intergenic not near genes chr2L 2305480 intergenic not near genes chr2L 2305572 intergenic not near genes chr2L_13_2305001 chr2L_2305001 EF39_1-HE 79 chr2L 2309833 2309895 chr2L 2309957 2310017 13 124 4.0 3.0 3.5 2.9 184 chr2L 2309833 intron CG9967 - chr2L 2309925 intron CG9967 - chr2L 2310017 intron CG9967 - chr2L_13_2305001 chr2L_2305001 EF39_1-HE 80 chr2L 2311061 2311090 chr2L 2311183 2311212 7 122 2.5 4.0 3.2 1.7 151 chr2L 2311061 intron CG9967 - chr2L 2311136 intron CG9967 - chr2L 2311212 intron CG9967 - chr2L_7_2310001 chr2L_2310001 EF39_1-HE 81 chr2L 2319412 2319455 chr2L 2319532 2319578 5 116 6.5 0.0 3.2 1.2 166 chr2L 2319412 intron,intron CG9967 -,eys + chr2L 2319495 intron,intron CG9967 -,eys + chr2L 2319578 intron,intron CG9967 -,eys + chr2L_5_2315001 chr2L_2315001 EF39_1-HE 82 chr2L 2332548 2332564 chr2L 2332763 2332779 5 215 0.0 3.5 1.8 1.8 231 chr2L 2332548 intron,intron CG9967 -,eys + chr2L 2332664 intron,intron CG9967 -,eys + chr2L 2332779 intron,intron CG9967 -,eys + chr2L_5_2330001 chr2L_2330001 EF39_1-HE 83 chr2L 2447806 2447854 chr2L 2447912 2447960 17 106 7.5 4.5 6.0 2.4 154 chr2L 2447806 intron dpp + chr2L 2447883 intron dpp + chr2L 2447960 intron dpp + chr2L_17_2445001 chr2L_2445001 EF39_1-HE 84 chr2L 2466376 2466406 chr2L 2466495 2466522 6 118 1.0 0.0 0.5 4.0 146 chr2L 2466376 intergenic not near genes chr2L 2466449 intergenic not near genes chr2L 2466522 intergenic not near genes chr2L_6_2465001 chr2L_2465001 EF39_1-HE 85 chr2L 2503516 2503567 chr2L 2503636 2503689 18 119 2.5 1.0 1.8 6.4 173 chr2L 2503516 intergenic not near genes chr2L 2503602 intergenic not near genes chr2L 2503689 intergenic not near genes chr2L_18_2500001 chr2L_2500001 EF39_1-HE 86 chr2L 2532379 2532432 chr2L 2532905 2532958 7 526 3.5 0.0 1.8 2.5 579 chr2L 2532379 intergenic not near genes chr2L 2532668 intergenic CR44112 - chr2L 2532958 intergenic CR44112 - chr2L_7_2530001 chr2L_2530001 EF39_1-HE 87 chr2L 2534136 2534192 chr2L 2534244 2534300 18 108 3.5 2.5 3.0 4.5 164 chr2L 2534136 intergenic not near genes chr2L 2534218 intergenic not near genes chr2L 2534300 intergenic not near genes chr2L_18_2530001 chr2L_2530001 EF39_1-HE 88 chr2L 2565528 2565559 chr2L 2571627 2571658 297 10 6099 3.0 3.0 3.0 2.5 6130 chr2L 2565528 exon Cyp309a2 - chr2L 2568593 intron Cyp309a2 - chr2L 2571658 exon Cyp309a2 - chr2L_10_2565001 chr2L_2565001 EF39_1-HE 89 chr2L 2589238 2589296 chr2L 2589388 2589446 14 150 2.0 1.0 1.5 5.6 208 chr2L 2589238 intergenic not near genes chr2L 2589342 intergenic not near genes chr2L 2589446 intergenic not near genes chr2L_14_2585001 chr2L_2585001 EF39_1-HE 90 chr2L 2591223 2591272 chr2L 2591326 2591375 23 101 5.0 2.5 3.8 4.8 152 chr2L 2591223 intergenic not near genes chr2L 2591299 intergenic not near genes chr2L 2591375 intergenic CG15394 + chr2L_23_2590001 chr2L_2590001 EF39_1-HE 91 chr2L 2613359 2613416 chr2L 2613470 2613532 12 115 3.5 0.0 1.8 4.3 173 chr2L 2613359 intergenic not near genes chr2L 2613446 intergenic not near genes chr2L 2613532 intergenic not near genes chr2L_12_2610001 chr2L_2610001 EF39_1-HE 92 chr2L 2661189 2661230 chr2L 2663030 2663074 I-element 13 1851 1.5 4.5 3.0 3.2 1885 chr2L 2661189 intergenic not near genes chr2L 2662132 intergenic not near genes chr2L 2663074 intergenic not near genes chr2L_13_2660001 chr2L_2660001 EF39_1-HE 93 chr2L 2728644 2728686 chr2L 2728769 2728812 11 126 1.5 4.0 2.8 2.9 168 chr2L 2728644 intron CG31689 + chr2L 2728728 intron CG31689 + chr2L 2728812 intron CG31689 + chr2L_11_2725001 chr2L_2725001 EF39_1-HE 94 chr2L 2749769 2749816 chr2L 2749873 2749921 7 100 5.0 2.5 3.8 1.5 152 chr2L 2749769 intron Pgk - chr2L 2749845 intron Pgk - chr2L 2749921 intron Pgk - chr2L_7_2745001 chr2L_2745001 EF39_1-HE 95 chr2L 2803974 2804024 chr2L 2804077 2804127 20 103 7.0 5.5 6.2 2.8 153 chr2L 2803974 intergenic not near genes chr2L 2804050 intergenic not near genes chr2L 2804127 intergenic not near genes chr2L_20_2800001 chr2L_2800001 EF39_1-HE 96 chr2L 2826518 2826530 chr2L 2826636 2826648 4 118 4.5 4.5 4.5 0.7 130 chr2L 2826518 intron Duox - chr2L 2826583 intron Duox - chr2L 2826648 intron Duox - chr2L_4_2825001 chr2L_2825001 EF39_1-HE 97 chr2L 2826532 2826570 chr2L 2826632 2826681 11 113 1.0 4.0 2.5 3.1 149 chr2L 2826532 intron Duox - chr2L 2826606 intron Duox - chr2L 2826681 intron Duox - chr2L_11_2825001 chr2L_2825001 EF39_1-HE 98 chr2L 2931967 2932020 chr2L 2932071 2932126 31 105 5.0 6.5 5.8 4.6 159 chr2L 2931967 intron lilli + chr2L 2932046 intron lilli + chr2L 2932126 intron lilli + chr2L_31_2930001 chr2L_2930001 EF39_1-HE 99 chr2L 2932976 2933025 chr2L 2933108 2933157 28 131 8.0 6.0 7.0 3.5 181 chr2L 2932976 intron lilli + chr2L 2933066 intron lilli + chr2L 2933157 intron lilli + chr2L_28_2930001 chr2L_2930001 EF39_1-HE 100 chr2L 2933270 2933319 chr2L 2935483 2935532 pogo 25 2212 7.0 7.5 7.2 3.0 2262 chr2L 2933270 intron lilli + chr2L 2934401 intron lilli + chr2L 2935532 intron lilli + chr2L_25_2930001 chr2L_2930001 EF39_1-HE 101 chr2L 3049233 3049260 chr2L 3049345 3049372 6 112 2.0 3.0 2.5 1.7 139 chr2L 3049233 intron v(2)k05816 + chr2L 3049302 intron v(2)k05816 + chr2L 3049372 intron v(2)k05816 + chr2L_6_3045001 chr2L_3045001 EF39_1-HE 102 chr2L 3073016 3073057 chr2L 3078243 3078286 copia 7 5228 5.0 3.0 4.0 1.4 5270 chr2L 3073016 intron toc - chr2L 3075651 intron toc - chr2L 3078286 intron toc - chr2L_7_3075001 chr2L_3075001 EF39_1-HE 103 chr2L 3106650 3106702 chr2L 3106754 3106806 17 104 5.0 4.0 4.5 3.1 156 chr2L 3106650 intron toc - chr2L 3106728 intron toc - chr2L 3106806 intron toc - chr2L_17_3105001 chr2L_3105001 EF39_1-HE 104 chr2L 3108850 3108897 chr2L 3108944 3109000 22 103 4.5 4.0 4.2 4.2 150 chr2L 3108850 exon toc - chr2L 3108925 intron toc - chr2L 3109000 intron toc - chr2L_22_3105001 chr2L_3105001 EF39_1-HE 105 chr2L 3122898 3122945 chr2L 3123001 3123048 6 103 3.5 2.0 2.8 1.6 150 chr2L 3122898 intron toc - chr2L 3122973 intron toc - chr2L 3123048 intron toc - chr2L_6_3120001 chr2L_3120001 EF39_1-HE 106 chr2L 3139411 3139463 chr2L 3139526 3139578 15 114 0.5 2.0 1.2 6.8 167 chr2L 3139411 intron toc - chr2L 3139494 intron toc - chr2L 3139578 intron toc - chr2L_15_3135001 chr2L_3135001 EF39_1-HE 107 chr2L 3147251 3147302 chr2L 3147354 3147403 25 103 2.5 6.5 4.5 4.5 152 chr2L 3147251 3` UTR Mad - chr2L 3147327 3` UTR Mad - chr2L 3147403 3` UTR Mad - chr2L_25_3145001 chr2L_3145001 EF39_1-HE 108 chr2L 3192188 3192233 chr2L 3192325 3192370 8 137 4.0 6.0 5.0 1.3 182 chr2L 3192188 exon CG34393 - chr2L 3192279 intron CG34393 - chr2L 3192370 intron CG34393 - chr2L_8_3190001 chr2L_3190001 EF39_1-HE 109 chr2L 3194986 3195018 chr2L 3195235 3195266 9 249 0.0 3.0 1.5 3.6 280 chr2L 3194986 intron CG34393 - chr2L 3195126 intron CG34393 - chr2L 3195266 intron CG34393 - chr2L_9_3195001 chr2L_3195001 EF39_1-HE 110 chr2L 3251473 3251501 chr2L 3259064 3259092 springer 9 7591 3.0 0.0 1.5 3.6 7619 chr2L 3251473 intergenic not near genes chr2L 3255282 intergenic not near genes chr2L 3259092 intergenic not near genes chr2L_9_3255001 chr2L_3255001 EF39_1-HE 111 chr2L 3272945 3272963 chr2L 3273047 3273065 4 102 0.0 3.5 1.8 1.4 120 chr2L 3272945 intergenic not near genes chr2L 3273005 intergenic not near genes chr2L 3273065 intergenic not near genes chr2L_4_3270001 chr2L_3270001 EF39_1-HE 112 chr2L 3273696 3273737 chr2L 3273798 3273839 8 102 2.0 3.0 2.5 2.3 143 chr2L 3273696 intergenic not near genes chr2L 3273768 intergenic not near genes chr2L 3273839 intergenic not near genes chr2L_8_3270001 chr2L_3270001 EF39_1-HE 113 chr2L 3291222 3291268 chr2L 3291328 3291374 8 106 3.0 4.0 3.5 1.8 152 chr2L 3291222 intergenic CG9664 - chr2L 3291298 3` UTR CG9664 - chr2L 3291374 3` UTR CG9664 - chr2L_8_3290001 chr2L_3290001 EF39_1-HE 114 chr2L 3337993 3338052 chr2L 3338102 3338161 11 109 4.0 4.5 4.2 2.1 168 chr2L 3337993 intron E23 - chr2L 3338077 intron E23 - chr2L 3338161 intron E23 - chr2L_11_3335001 chr2L_3335001 EF39_1-HE 115 chr2L 3344170 3344196 chr2L 3344274 3344300 7 104 8.0 3.5 5.8 1.0 130 chr2L 3344170 intron E23 - chr2L 3344235 intron E23 - chr2L 3344300 intron E23 - chr2L_7_3340001 chr2L_3340001 EF39_1-HE 116 chr2L 3388579 3388628 chr2L 3388846 3388895 pogo 16 267 4.5 3.0 3.8 3.3 316 chr2L 3388579 intergenic CG42460 - chr2L 3388737 intergenic CG42460 - chr2L 3388895 intergenic CG42460 -,CR44791 + chr2L_16_3385001 chr2L_3385001 EF39_1-HE 117 chr2L 3393757 3393809 chr2L 3393868 3393920 14 110 3.5 6.5 5.0 2.3 163 chr2L 3393757 intergenic not near genes chr2L 3393838 intergenic not near genes chr2L 3393920 intergenic not near genes chr2L_14_3390001 chr2L_3390001 EF39_1-HE 118 chr2L 3395702 3395750 chr2L 3395815 3395863 15 111 4.0 2.5 3.2 3.6 161 chr2L 3395702 intergenic not near genes chr2L 3395782 intergenic not near genes chr2L 3395863 intergenic not near genes chr2L_15_3395001 chr2L_3395001 EF39_1-HE 119 chr2L 3435493 3435550 chr2L 3435603 3435614 9 104 0.5 3.5 2.0 3.0 121 chr2L 3435493 intergenic not near genes chr2L 3435554 intergenic not near genes chr2L 3435614 intergenic not near genes chr2L_9_3435001 chr2L_3435001 EF39_1-HE 120 chr2L 3437134 3437155 chr2L 3437243 3437264 8 109 5.5 3.0 4.2 1.5 130 chr2L 3437134 intergenic not near genes chr2L 3437199 intergenic not near genes chr2L 3437264 intergenic not near genes chr2L_8_3435001 chr2L_3435001 EF39_1-HE 121 chr2L 3480471 3480486 chr2L 3480576 3480591 4 105 4.0 4.5 4.2 0.8 120 chr2L 3480471 intergenic CG15414 - chr2L 3480531 intergenic CG15414 - chr2L 3480591 intergenic CG15414 - chr2L_4_3480001 chr2L_3480001 EF39_1-HE 122 chr2L 3536090 3536127 chr2L 3536204 3536241 11 114 11.0 5.0 8.0 1.2 151 chr2L 3536090 intergenic not near genes chr2L 3536166 intergenic not near genes chr2L 3536241 intergenic not near genes chr2L_11_3535001 chr2L_3535001 EF39_1-HE 123 chr2L 3540314 3540370 chr2L 3540440 3540494 14 126 3.0 2.0 2.5 4.0 180 chr2L 3540314 intron drm + chr2L 3540404 intron drm + chr2L 3540494 intron drm + chr2L_14_3540001 chr2L_3540001 EF39_1-HE 124 chr2L 3582853 3582890 chr2L 3582956 3582993 5 103 2.0 1.5 1.8 1.8 140 chr2L 3582853 intergenic not near genes chr2L 3582923 intergenic not near genes chr2L 3582993 intergenic not near genes chr2L_5_3580001 chr2L_3580001 EF39_1-HE 125 chr2L 3629121 3629173 chr2L 3629227 3629279 6 105 2.5 1.5 2.0 2.0 158 chr2L 3629121 intron for - chr2L 3629200 intron for - chr2L 3629279 intron for - chr2L_6_3625001 chr2L_3625001 EF39_1-HE 126 chr2L 3632239 3632267 chr2L 3632342 3632370 7 103 0.0 0.0 0.0 7.0 131 chr2L 3632239 intron for - chr2L 3632304 intron for - chr2L 3632370 intron for - chr2L_7_3630001 chr2L_3630001 EF39_1-HE 127 chr2L 3649771 3649813 chr2L 3655000 3655042 copia 9 5229 4.0 1.5 2.8 2.4 5271 chr2L 3649771 intron for - chr2L 3652406 intron for - chr2L 3655042 intron for - chr2L_9_3650001 chr2L_3650001 EF39_1-HE 128 chr2L 3735801 3735850 chr2L 3736021 3736070 9 220 2.5 2.5 2.5 2.6 269 chr2L 3735801 intron CG10019 + chr2L 3735936 intron CG10019 + chr2L 3736070 intron CG10019 + chr2L_9_3735001 chr2L_3735001 EF39_1-HE 129 chr2L 3792463 3792495 chr2L 3792580 3792612 9 116 1.5 1.0 1.2 4.1 149 chr2L 3792463 intron CG3921 + chr2L 3792538 intron CG3921 + chr2L 3792612 exon CG3921 + chr2L_9_3790001 chr2L_3790001 EF39_1-HE 130 chr2L 3802504 3802552 chr2L 3802610 3802658 11 106 1.5 3.5 2.5 3.1 154 chr2L 3802504 3` UTR CG3921 + chr2L 3802581 3` UTR CG3921 + chr2L 3802658 3` UTR CG3921 + chr2L_11_3800001 chr2L_3800001 EF39_1-HE 131 chr2L 3819602 3819629 chr2L 3819704 3819731 5 102 4.5 4.5 4.5 0.9 129 chr2L 3819602 intergenic not near genes chr2L 3819666 intergenic not near genes chr2L 3819731 intergenic not near genes chr2L_5_3815001 chr2L_3815001 EF39_1-HE 132 chr2L 3856677 3856687 chr2L 3856785 3856795 4 108 0.0 8.0 4.0 0.8 118 chr2L 3856677 3` UTR CR45450 - chr2L 3856736 3` UTR CR45450 - chr2L 3856795 3` UTR CR45450 - chr2L_4_3855001 chr2L_3855001 EF39_1-HE 133 chr2L 3862401 3862415 chr2L 3862511 3862525 6 110 5.5 0.0 2.8 1.6 124 chr2L 3862401 intergenic CG3964 +,CR44078 - chr2L 3862463 intergenic CG3964 +,CR44078 - chr2L 3862525 intergenic CG3964 +,CR44078 - chr2L_6_3860001 chr2L_3860001 EF39_1-HE 134 chr2L 3898242 3898308 chr2L 3898353 3898412 13 109 0.5 4.0 2.2 4.1 170 chr2L 3898242 intron capu - chr2L 3898327 intron capu - chr2L 3898412 intron capu - chr2L_13_3895001 chr2L_3895001 EF39_1-HE 135 chr2L 3915316 3915321 chr2L 3915478 3915483 4 162 1.5 9.0 5.2 0.6 167 chr2L 3915316 intron fred - chr2L 3915400 intron fred - chr2L 3915483 intron fred - chr2L_4_3915001 chr2L_3915001 EF39_1-HE 136 chr2L 3936602 3936656 chr2L 3936706 3936762 11 105 3.0 3.0 3.0 2.8 160 chr2L 3936602 intron fred - chr2L 3936682 intron fred - chr2L 3936762 intron fred - chr2L_11_3935001 chr2L_3935001 EF39_1-HE 137 chr2L 3943769 3943811 chr2L 3943886 3943928 13 117 4.5 3.0 3.8 2.7 159 chr2L 3943769 intron fred - chr2L 3943848 intron fred - chr2L 3943928 intron fred - chr2L_13_3940001 chr2L_3940001 EF39_1-HE 138 chr2L 3944883 3944920 chr2L 3944987 3945024 12 103 6.0 3.5 4.8 2.1 141 chr2L 3944883 intron fred - chr2L 3944954 intron fred - chr2L 3945024 intron fred - chr2L_12_3940001 chr2L_3940001 EF39_1-HE 139 chr2L 3945881 3945916 chr2L 3945997 3946032 13 116 0.5 8.0 4.2 2.5 151 chr2L 3945881 intron fred - chr2L 3945956 intron fred - chr2L 3946032 intron fred - chr2L_13_3945001 chr2L_3945001 EF39_1-HE 140 chr2L 3961420 3961453 chr2L 3961539 3961572 6 119 4.0 5.5 4.8 1.0 152 chr2L 3961420 intron fred - chr2L 3961496 intron fred - chr2L 3961572 intron fred - chr2L_6_3960001 chr2L_3960001 EF39_1-HE 141 chr2L 3981094 3981145 chr2L 3982582 3982633 13 1485 3.0 11.0 7.0 1.6 1539 chr2L 3981094 intron fred - chr2L 3981864 intron fred - chr2L 3982633 intron fred - chr2L_13_3980001 chr2L_3980001 EF39_1-HE 142 chr2L 3985961 3985985 chr2L 3986065 3986089 7 104 3.5 5.0 4.2 1.3 128 chr2L 3985961 intron fred - chr2L 3986025 intron fred - chr2L 3986089 intron fred - chr2L_7_3985001 chr2L_3985001 EF39_1-HE 143 chr2L 3992059 3992116 chr2L 3992172 3992229 9 113 3.5 3.5 3.5 2.0 170 chr2L 3992059 intergenic fred - chr2L 3992144 intergenic fred - chr2L 3992229 intergenic not near genes chr2L_9_3990001 chr2L_3990001 EF39_1-HE 144 chr2L 4001636 4001689 chr2L 4001760 4001813 10 124 2.0 4.0 3.0 2.5 177 chr2L 4001636 intergenic CR45344 + chr2L 4001724 intergenic CR45344 + chr2L 4001813 intergenic CR45344 + chr2L_10_4000001 chr2L_4000001 EF39_1-HE 145 chr2L 4004512 4004546 chr2L 4004621 4004655 7 109 0.0 7.0 3.5 1.6 143 chr2L 4004512 intergenic CG34176 +,CG15422 + chr2L 4004584 intergenic CG34176 +,CG15422 + chr2L 4004655 intergenic CG34176 +,CG15422 + chr2L_7_4000001 chr2L_4000001 EF39_1-HE 146 chr2L 4016139 4016190 chr2L 4016260 4016311 11 121 1.0 2.5 1.8 3.9 172 chr2L 4016139 intergenic not near genes chr2L 4016225 intergenic not near genes chr2L 4016311 intergenic not near genes chr2L_11_4015001 chr2L_4015001 EF39_1-HE 147 chr2L 4020117 4020141 chr2L 4020750 4020774 5 632 0.0 5.5 2.8 1.3 657 chr2L 4020117 intergenic not near genes chr2L 4020446 intergenic not near genes chr2L 4020774 intergenic not near genes chr2L_5_4020001 chr2L_4020001 EF39_1-HE 148 chr2L 4032892 4032909 chr2L 4033610 4033627 5 718 1.5 1.0 1.2 2.3 735 chr2L 4032892 intron ed + chr2L 4033260 intron ed + chr2L 4033627 intron ed + chr2L_5_4030001 chr2L_4030001 EF39_1-HE 149 chr2L 4037776 4037804 chr2L 4037889 4037917 7 113 0.5 1.0 0.8 3.9 141 chr2L 4037776 intron ed + chr2L 4037846 intron ed + chr2L 4037917 intron ed + chr2L_7_4035001 chr2L_4035001 EF39_1-HE 150 chr2L 4060166 4060186 chr2L 4060268 4060288 4 102 3.0 2.0 2.5 1.1 122 chr2L 4060166 intron ed + chr2L 4060227 intron ed + chr2L 4060288 intron ed + chr2L_4_4060001 chr2L_4060001 EF39_1-HE 151 chr2L 4062974 4063003 chr2L 4063105 4063125 8 129 4.0 5.5 4.8 1.4 151 chr2L 4062974 intron ed + chr2L 4063050 intron ed + chr2L 4063125 intron ed + chr2L_8_4060001 chr2L_4060001 EF39_1-HE 152 chr2L 4066034 4066051 chr2L 4068885 4068902 Juan 6 2851 3.0 7.0 5.0 1.0 2868 chr2L 4066034 intron ed + chr2L 4067468 intron ed + chr2L 4068902 intron ed + chr2L_6_4065001 chr2L_4065001 EF39_1-HE 153 chr2L 4138110 4138164 chr2L 4138216 4138269 11 106 3.0 4.0 3.5 2.4 159 chr2L 4138110 intergenic not near genes chr2L 4138190 intergenic not near genes chr2L 4138269 intergenic not near genes chr2L_11_4135001 chr2L_4135001 EF39_1-HE 154 chr2L 4166352 4166411 chr2L 4166461 4166520 13 109 1.5 5.0 3.2 3.1 168 chr2L 4166352 intergenic Or24a - chr2L 4166436 intergenic Or24a - chr2L 4166520 intergenic Or24a - chr2L_13_4165001 chr2L_4165001 EF39_1-HE 155 chr2L 4180101 4180130 chr2L 4180203 4180232 10 102 3.5 3.5 3.5 2.2 131 chr2L 4180101 intergenic not near genes chr2L 4180166 intergenic not near genes chr2L 4180232 intergenic not near genes chr2L_10_4180001 chr2L_4180001 EF39_1-HE 156 chr2L 4184520 4184554 chr2L 4184637 4184671 8 117 5.5 3.0 4.2 1.5 151 chr2L 4184520 intergenic not near genes chr2L 4184596 intergenic not near genes chr2L 4184671 intergenic not near genes chr2L_8_4180001 chr2L_4180001 EF39_1-HE 157 chr2L 4280289 4280342 chr2L 4280418 4280469 7 127 2.5 2.5 2.5 2.0 180 chr2L 4280289 intron Art2 - chr2L 4280379 intron Art2 - chr2L 4280469 intron Art2 - chr2L_7_4280001 chr2L_4280001 EF39_1-HE 158 chr2L 4285133 4285179 chr2L 4285423 4285469 15 288 5.0 4.5 4.8 2.6 336 chr2L 4285133 intron tutl + chr2L 4285301 intron tutl + chr2L 4285469 intron tutl + chr2L_15_4285001 chr2L_4285001 EF39_1-HE 159 chr2L 4288475 4288526 chr2L 4288591 4288642 16 116 5.5 8.5 7.0 2.0 167 chr2L 4288475 intron tutl + chr2L 4288558 intron tutl + chr2L 4288642 intron tutl + chr2L_16_4285001 chr2L_4285001 EF39_1-HE 160 chr2L 4345470 4345511 chr2L 4345574 4345615 4 104 1.0 0.0 0.5 2.7 145 chr2L 4345470 3` UTR Atet + chr2L 4345542 3` UTR Atet + chr2L 4345615 3` UTR Atet + chr2L_4_4345001 chr2L_4345001 EF39_1-HE 161 chr2L 4360012 4360033 chr2L 4360196 4360217 5 184 5.0 3.5 4.2 1.0 205 chr2L 4360012 intergenic not near genes chr2L 4360114 intergenic not near genes chr2L 4360217 intergenic not near genes chr2L_5_4360001 chr2L_4360001 EF39_1-HE 162 chr2L 4420176 4420198 chr2L 4420340 4420362 6 164 0.0 4.5 2.2 1.9 186 chr2L 4420176 intron CG15431 - chr2L 4420269 intron CG15431 - chr2L 4420362 intron CG15431 - chr2L_6_4420001 chr2L_4420001 EF39_1-HE 163 chr2L 4435054 4435208 chr2L 4435166 4435317 4 110 1.0 1.0 1.0 2.0 263 chr2L 4435054 intron,3` UTR,3` UTR CG15431 -,CG34177 +,CG34178 + chr2L 4435186 intron CG15431 - chr2L 4435317 intron CG15431 - chr2L_4_4435001 chr2L_4435001 EF39_1-HE 164 chr2L 4601679 4601736 chr2L 4609146 4609203 mdg1 15 7467 4.0 2.0 3.0 3.8 7524 chr2L 4601679 intron dp - chr2L 4605441 intron dp - chr2L 4609203 intron dp - chr2L_15_4605001 chr2L_4605001 EF39_1-HE 165 chr2L 4661822 4661852 chr2L 4669428 4669458 opus 4 7606 2.5 4.0 3.2 1.0 7636 chr2L 4661822 intergenic not near genes chr2L 4665640 intergenic not near genes chr2L 4669458 intergenic not near genes chr2L_4_4665001 chr2L_4665001 EF39_1-HE 166 chr2L 4676845 4676885 chr2L 4676950 4676989 7 105 2.5 2.0 2.2 2.2 144 chr2L 4676845 intergenic not near genes chr2L 4676917 intergenic not near genes chr2L 4676989 intergenic not near genes chr2L_7_4675001 chr2L_4675001 EF39_1-HE 167 chr2L 4677552 4677600 chr2L 4677846 4677894 8 294 2.5 4.0 3.2 1.9 342 chr2L 4677552 intergenic not near genes chr2L 4677723 intergenic not near genes chr2L 4677894 intergenic not near genes chr2L_8_4675001 chr2L_4675001 EF39_1-HE 168 chr2L 4697404 4697452 chr2L 4697854 4697899 4 448 4.0 0.0 2.0 1.3 495 chr2L 4697404 intron CG34351 + chr2L 4697652 intron CG34351 + chr2L 4697899 intron CG34351 + chr2L_4_4695001 chr2L_4695001 EF39_1-HE 169 chr2L 4710510 4710549 chr2L 4710653 4710692 8 142 2.0 1.5 1.8 2.9 182 chr2L 4710510 intron CG34351 + chr2L 4710601 intron CG34351 + chr2L 4710692 intron CG34351 + chr2L_8_4710001 chr2L_4710001 EF39_1-HE 170 chr2L 4841047 4841101 chr2L 4841149 4841203 15 102 3.5 1.0 2.2 4.7 156 chr2L 4841047 intron CG12194 + chr2L 4841125 intron CG12194 + chr2L 4841203 3` UTR CG12194 + chr2L_15_4840001 chr2L_4840001 EF39_1-HE 171 chr2L 4925188 4925237 chr2L 4925298 4925347 16 109 1.5 3.0 2.2 5.0 159 chr2L 4925188 intron hoe1 - chr2L 4925268 intron hoe1 - chr2L 4925347 intron hoe1 - chr2L_16_4925001 chr2L_4925001 EF39_1-HE 172 chr2L 4941704 4941729 chr2L 4941808 4941833 7 103 4.0 0.5 2.2 2.2 129 chr2L 4941704 intergenic Sgs1 + chr2L 4941768 intergenic Sgs1 + chr2L 4941833 intergenic Sgs1 + chr2L_7_4940001 chr2L_4940001 EF39_1-HE 173 chr2L 4953488 4953524 chr2L 4953755 4953791 pogo 6 267 1.5 1.0 1.2 2.7 303 chr2L 4953488 intergenic Jon25Bii - chr2L 4953640 intergenic not near genes chr2L 4953791 intergenic Jon25Bi - chr2L_6_4950001 chr2L_4950001 EF39_1-HE 174 chr2L 5104646 5104666 chr2L 5104762 5104781 6 116 0.0 4.0 2.0 2.0 135 chr2L 5104646 intron Msp300 + chr2L 5104714 intron Msp300 + chr2L 5104781 intron Msp300 + chr2L_6_5100001 chr2L_5100001 EF39_1-HE 175 chr2L 5117289 5117320 chr2L 5117397 5117427 5 108 3.5 1.0 2.2 1.6 138 chr2L 5117289 intron Msp300 + chr2L 5117358 intron Msp300 + chr2L 5117427 intron Msp300 + chr2L_5_5115001 chr2L_5115001 EF39_1-HE 176 chr2L 5207894 5207938 chr2L 5208097 5208142 9 203 2.0 2.0 2.0 3.0 248 chr2L 5207894 exon Cyp28d2 + chr2L 5208018 intron Cyp28d2 + chr2L 5208142 exon Cyp28d2 + chr2L_9_5205001 chr2L_5205001 EF39_1-HE 177 chr2L 5208982 5209020 chr2L 5212804 5212842 7 3822 11.0 37.5 24.2 0.3 3860 chr2L 5208982 exon Cyp28d2 + chr2L 5210912 intron Cyp28d1 + chr2L 5212842 intron CG7742 - chr2L_7_5210001 chr2L_5210001 EF39_1-HE 178 chr2L 5240964 5240988 chr2L 5241068 5241095 5 106 2.0 2.0 2.0 1.7 131 chr2L 5240964 intron tkv - chr2L 5241030 intron tkv - chr2L 5241095 intron tkv - chr2L_5_5240001 chr2L_5240001 EF39_1-HE 179 chr2L 5248202 5248248 chr2L 5248317 5248363 11 115 2.5 4.5 3.5 2.4 161 chr2L 5248202 intron tkv - chr2L 5248282 intron tkv - chr2L 5248363 intron tkv - chr2L_11_5245001 chr2L_5245001 EF39_1-HE 180 chr2L 5265749 5265796 chr2L 5265918 5265965 15 169 4.0 2.5 3.2 3.6 216 chr2L 5265749 intron,exon tkv -,Cyp4ac1 + chr2L 5265857 intron,3` UTR tkv -,Cyp4ac1 + chr2L 5265965 intron tkv - chr2L_15_5265001 chr2L_5265001 EF39_1-HE 181 chr2L 5294706 5294755 chr2L 5294836 5294884 17 128 1.0 4.0 2.5 4.9 178 chr2L 5294706 intron vri + chr2L 5294795 intron vri + chr2L 5294884 intron vri + chr2L_17_5290001 chr2L_5290001 EF39_1-HE 182 chr2L 5334756 5334771 chr2L 5334885 5334900 4 129 4.0 3.0 3.5 0.9 144 chr2L 5334756 intron fusl - chr2L 5334828 intron fusl - chr2L 5334900 intron fusl - chr2L_4_5330001 chr2L_5330001 EF39_1-HE 183 chr2L 5334772 5334799 chr2L 5334884 5334927 10 127 3.0 3.0 3.0 2.5 155 chr2L 5334772 intron fusl - chr2L 5334850 intron fusl - chr2L 5334927 intron fusl - chr2L_10_5330001 chr2L_5330001 EF39_1-HE 184 chr2L 5338021 5338066 chr2L 5338723 5338768 9 702 21.5 25.0 23.2 0.4 747 chr2L 5338021 5` UTR fusl - chr2L 5338394 intergenic fusl - chr2L 5338768 intergenic CG12512 - chr2L_9_5335001 chr2L_5335001 EF39_1-HE 185 chr2L 5378403 5378452 chr2L 5378508 5378557 10 105 3.5 2.5 3.0 2.5 154 chr2L 5378403 intergenic not near genes chr2L 5378480 intergenic not near genes chr2L 5378557 intergenic not near genes chr2L_10_5375001 chr2L_5375001 EF39_1-HE 186 chr2L 5386835 5386867 chr2L 5386962 5386997 6 130 5.0 2.0 3.5 1.3 162 chr2L 5386835 intergenic not near genes chr2L 5386916 intergenic not near genes chr2L 5386997 intergenic not near genes chr2L_6_5385001 chr2L_5385001 EF39_1-HE 187 chr2L 5389592 5389625 chr2L 5389697 5389731 14 106 8.5 0.0 4.2 2.7 139 chr2L 5389592 intergenic not near genes chr2L 5389662 intergenic not near genes chr2L 5389731 intergenic not near genes chr2L_14_5385001 chr2L_5385001 EF39_1-HE 188 chr2L 5433060 5433121 chr2L 5433163 5433223 22 102 6.0 11.0 8.5 2.3 163 chr2L 5433060 5` UTR CR43714 + chr2L 5433142 5` UTR CR43714 + chr2L 5433223 5` UTR CR43714 + chr2L_22_5430001 chr2L_5430001 EF39_1-HE 189 chr2L 5436514 5436541 chr2L 5436617 5436644 12 102 12.0 17.5 14.8 0.8 130 chr2L 5436514 3` UTR CR31647 - chr2L 5436579 3` UTR CR31647 - chr2L 5436644 3` UTR CR31647 - chr2L_12_5435001 chr2L_5435001 EF39_1-HE 190 chr2L 5475125 5475163 chr2L 5475256 5475294 9 131 4.0 3.0 3.5 2.0 169 chr2L 5475125 intergenic not near genes chr2L 5475210 intergenic not near genes chr2L 5475294 intergenic not near genes chr2L_9_5475001 chr2L_5475001 EF39_1-HE 191 chr2L 5516633 5516688 chr2L 5516738 5516793 11 105 1.5 1.0 1.2 5.0 160 chr2L 5516633 intergenic not near genes chr2L 5516713 intergenic not near genes chr2L 5516793 intergenic not near genes chr2L_11_5515001 chr2L_5515001 EF39_1-HE 192 chr2L 5594299 5594350 chr2L 5594417 5594468 10 117 3.5 4.0 3.8 2.1 169 chr2L 5594299 intergenic not near genes chr2L 5594384 intergenic not near genes chr2L 5594468 intergenic not near genes chr2L_10_5590001 chr2L_5590001 EF39_1-HE 193 chr2L 5605288 5605337 chr2L 5605534 5605583 13 246 1.5 4.0 2.8 3.4 295 chr2L 5605288 intron CG14010 - chr2L 5605436 intron CG14010 - chr2L 5605583 intron CG14010 - chr2L_13_5605001 chr2L_5605001 EF39_1-HE 194 chr2L 5644332 5644386 chr2L 5644440 5644486 27 107 9.0 7.5 8.2 2.9 154 chr2L 5644332 intron CG31646 - chr2L 5644409 intron CG31646 - chr2L 5644486 intron CG31646 - chr2L_27_5640001 chr2L_5640001 EF39_1-HE 195 chr2L 5666291 5666321 chr2L 5666407 5666437 8 116 4.0 5.5 4.8 1.4 146 chr2L 5666291 intron Hsp60C + chr2L 5666364 intron Hsp60C + chr2L 5666437 intron Hsp60C + chr2L_8_5665001 chr2L_5665001 EF39_1-HE 196 chr2L 5683170 5683217 chr2L 5683293 5683347 12 128 1.0 6.5 3.8 2.5 177 chr2L 5683170 intergenic not near genes chr2L 5683258 intergenic not near genes chr2L 5683347 intergenic not near genes chr2L_12_5680001 chr2L_5680001 EF39_1-HE 197 chr2L 5791874 5791896 chr2L 5791980 5792003 11 106 3.5 5.0 4.2 2.1 129 chr2L 5791874 intron CG9171 - chr2L 5791938 intron CG9171 - chr2L 5792003 intron CG9171 - chr2L_11_5790001 chr2L_5790001 EF39_1-HE 198 chr2L 5807272 5807280 chr2L 5807374 5807381 4 102 9.5 2.5 6.0 0.6 109 chr2L 5807272 exon CG11034 + chr2L 5807326 exon CG11034 + chr2L 5807381 exon CG11034 + chr2L_4_5805001 chr2L_5805001 EF39_1-HE 199 chr2L 5807281 5807327 chr2L 5807371 5807427 19 97 4.0 3.5 3.8 4.0 146 chr2L 5807281 exon CG11034 + chr2L 5807354 exon CG11034 + chr2L 5807427 exon CG11034 + chr2L_19_5805001 chr2L_5805001 EF39_1-HE 200 chr2L 5814760 5814811 chr2L 5814894 5814945 13 133 2.0 4.0 3.0 3.2 185 chr2L 5814760 intergenic not near genes chr2L 5814852 intergenic not near genes chr2L 5814945 intergenic not near genes chr2L_13_5810001 chr2L_5810001 EF39_1-HE 201 chr2L 5827688 5827741 chr2L 5836722 5836775 roo 14 9034 2.0 3.5 2.8 3.7 9087 chr2L 5827688 intron TrissinR + chr2L 5832232 intron TrissinR + chr2L 5836775 intron TrissinR + chr2L_14_5830001 chr2L_5830001 EF39_1-HE 202 chr2L 5941715 5941742 chr2L 5941925 5941952 16 210 9.5 4.5 7.0 2.0 237 chr2L 5941715 intergenic CR45289 + chr2L 5941834 intergenic CR45289 + chr2L 5941952 intergenic CR45289 + chr2L_16_5940001 chr2L_5940001 EF39_1-HE 203 chr2L 5989015 5989021 chr2L 5989117 5989122 4 102 5.5 0.0 2.8 1.1 107 chr2L 5989015 intergenic ifc +,lid - chr2L 5989068 intergenic ifc +,lid - chr2L 5989122 intergenic ifc +,lid - chr2L_4_5985001 chr2L_5985001 EF39_1-HE 204 chr2L 6047882 6047933 chr2L 6048009 6048060 19 126 1.5 3.0 2.2 5.9 178 chr2L 6047882 3` UTR,intron CG34179 -,slmo - chr2L 6047971 3` UTR,intron CG34179 -,slmo - chr2L 6048060 3` UTR,intron,5` UTR CG34179 -,slmo -,CG12393 + chr2L_19_6045001 chr2L_6045001 EF39_1-HE 205 chr2L 6060117 6060168 chr2L 6060220 6060271 9 103 2.0 2.0 2.0 3.0 154 chr2L 6060117 3` UTR CG13995 + chr2L 6060194 intergenic CG13995 +,CG34180 + chr2L 6060271 intergenic CG13995 +,CG34180 + chr2L_9_6060001 chr2L_6060001 EF39_1-HE 206 chr2L 6076487 6076515 chr2L 6076602 6076626 4 111 1.5 2.5 2.0 1.3 139 chr2L 6076487 intergenic not near genes chr2L 6076556 intergenic not near genes chr2L 6076626 intergenic not near genes chr2L_4_6075001 chr2L_6075001 EF39_1-HE 207 chr2L 6103193 6103252 chr2L 6103297 6103355 7 103 1.5 2.5 2.0 2.3 162 chr2L 6103193 intron stai + chr2L 6103274 intron stai + chr2L 6103355 intron stai + chr2L_7_6100001 chr2L_6100001 EF39_1-HE 208 chr2L 6138643 6138658 chr2L 6138856 6138871 4 213 1.0 2.5 1.8 1.4 228 chr2L 6138643 intergenic CR44824 - chr2L 6138757 intergenic CR44824 - chr2L 6138871 3` UTR CR44824 - chr2L_4_6135001 chr2L_6135001 EF39_1-HE 209 chr2L 6242987 6242998 chr2L 6243111 6243122 4 124 0.5 6.0 3.2 1.0 135 chr2L 6242987 intergenic not near genes chr2L 6243054 intergenic not near genes chr2L 6243122 intergenic not near genes chr2L_4_6240001 chr2L_6240001 EF39_1-HE 210 chr2L 6283917 6283970 chr2L 6284054 6284107 15 137 5.5 5.0 5.2 2.4 190 chr2L 6283917 intron Ddr + chr2L 6284012 intron Ddr + chr2L 6284107 intron Ddr + chr2L_15_6280001 chr2L_6280001 EF39_1-HE 211 chr2L 6286363 6286414 chr2L 6286484 6286534 11 120 3.5 4.5 4.0 2.2 171 chr2L 6286363 intron Ddr + chr2L 6286448 intron Ddr + chr2L 6286534 intron Ddr + chr2L_11_6285001 chr2L_6285001 EF39_1-HE 212 chr2L 6361172 6361228 chr2L 6361284 6361340 11 111 4.0 1.0 2.5 3.1 168 chr2L 6361172 5` UTR CR44778 + chr2L 6361256 5` UTR CR44778 + chr2L 6361340 5` UTR CR44778 + chr2L_11_6360001 chr2L_6360001 EF39_1-HE 213 chr2L 6363130 6363168 chr2L 6366078 6366116 Burdock 8 2948 3.5 3.5 3.5 1.8 2986 chr2L 6363130 intergenic not near genes chr2L 6364623 intergenic not near genes chr2L 6366116 intergenic not near genes chr2L_8_6360001 chr2L_6360001 EF39_1-HE 214 chr2L 6371655 6371706 chr2L 6371759 6371810 12 104 4.0 3.0 3.5 2.7 155 chr2L 6371655 intergenic not near genes chr2L 6371732 intergenic not near genes chr2L 6371810 intergenic not near genes chr2L_12_6370001 chr2L_6370001 EF39_1-HE 215 chr2L 6387972 6388019 chr2L 6388077 6388114 6 103 3.0 0.5 1.8 2.1 142 chr2L 6387972 intron CG42368 - chr2L 6388043 intron CG42368 - chr2L 6388114 intron CG42368 - chr2L_6_6385001 chr2L_6385001 EF39_1-HE 216 chr2L 6409863 6409909 chr2L 6410099 6410145 7 236 5.0 3.0 4.0 1.4 282 chr2L 6409863 intron CG42368 - chr2L 6410004 intron CG42368 - chr2L 6410145 intron CG42368 - chr2L_7_6410001 chr2L_6410001 EF39_1-HE 217 chr2L 6426839 6426886 chr2L 6445125 6445172 roo 5 18286 2.0 3.5 2.8 1.3 18333 chr2L 6426839 3` UTR CG9527 - chr2L 6436006 intron CG9527 - chr2L 6445172 exon CG9527 - chr2L_5_6435001 chr2L_6435001 EF39_1-HE 218 chr2L 6504991 6505047 chr2L 6505099 6505155 17 108 2.0 2.0 2.0 5.7 164 chr2L 6504991 intron CG31637 + chr2L 6505073 intron CG31637 + chr2L 6505155 intron CG31637 + chr2L_17_6505001 chr2L_6505001 EF39_1-HE 219 chr2L 6508231 6508265 chr2L 6508343 6508377 9 112 12.5 0.5 6.5 1.2 146 chr2L 6508231 intron,3` UTR CG31637 +,CR44775 - chr2L 6508304 intron,3` UTR CG31637 +,CR44775 - chr2L 6508377 intron,3` UTR CG31637 +,CR44775 - chr2L_9_6505001 chr2L_6505001 EF39_1-HE 220 chr2L 6550427 6550469 chr2L 6550585 6550627 8 158 6.0 4.5 5.2 1.3 200 chr2L 6550427 intergenic not near genes chr2L 6550527 intergenic not near genes chr2L 6550627 intergenic not near genes chr2L_8_6550001 chr2L_6550001 EF39_1-HE 221 chr2L 6587647 6587708 chr2L 6587771 6587830 11 122 3.5 3.5 3.5 2.4 183 chr2L 6587647 intron CG11319 - chr2L 6587738 intron CG11319 - chr2L 6587830 intron CG11319 - chr2L_11_6585001 chr2L_6585001 EF39_1-HE 222 chr2L 6588006 6588032 chr2L 6588204 6588230 12 198 0.5 8.0 4.2 2.3 224 chr2L 6588006 intron CG11319 - chr2L 6588118 intron CG11319 - chr2L 6588230 intron CG11319 - chr2L_12_6585001 chr2L_6585001 EF39_1-HE 223 chr2L 6590202 6590246 chr2L 6590304 6590337 7 100 3.5 0.0 1.8 2.5 135 chr2L 6590202 intron CG11319 - chr2L 6590270 intron CG11319 - chr2L 6590337 intron CG11319 - chr2L_7_6590001 chr2L_6590001 EF39_1-HE 224 chr2L 6601771 6601822 chr2L 6601886 6601937 30 114 4.5 5.0 4.8 5.2 166 chr2L 6601771 intergenic not near genes chr2L 6601854 intergenic not near genes chr2L 6601937 intergenic not near genes chr2L_30_6600001 chr2L_6600001 EF39_1-HE 225 chr2L 6655510 6655552 chr2L 6655895 6655937 7 385 3.5 5.0 4.2 1.3 427 chr2L 6655510 exon CG31633 - chr2L 6655724 exon CG31633 - chr2L 6655937 exon CG31633 - chr2L_7_6655001 chr2L_6655001 EF39_1-HE 226 chr2L 6724502 6724557 chr2L 6724611 6724666 11 105 2.5 6.0 4.2 2.1 164 chr2L 6724502 intron Liprin-alpha + chr2L 6724584 intron Liprin-alpha + chr2L 6724666 intron Liprin-alpha + chr2L_11_6720001 chr2L_6720001 EF39_1-HE 227 chr2L 6771960 6772019 chr2L 6772073 6772132 17 112 4.5 6.0 5.2 2.7 172 chr2L 6771960 intron CG11321 - chr2L 6772046 intron CG11321 - chr2L 6772132 intron CG11321 - chr2L_17_6770001 chr2L_6770001 EF39_1-HE 228 chr2L 6798095 6798149 chr2L 6798205 6798259 18 110 2.5 5.5 4.0 3.6 164 chr2L 6798095 intron nrv2 - chr2L 6798177 intron nrv2 - chr2L 6798259 5` UTR nrv2 - chr2L_18_6795001 chr2L_6795001 EF39_1-HE 229 chr2L 6799514 6799548 chr2L 6799628 6799661 6 114 10.0 2.5 6.2 0.8 147 chr2L 6799514 5` UTR CR43610 + chr2L 6799588 5` UTR CR43610 + chr2L 6799661 intergenic CR43610 +,CG17376 - chr2L_6_6795001 chr2L_6795001 EF39_1-HE 230 chr2L 6818102 6818141 chr2L 6818217 6818254 4 114 0.0 10.0 5.0 0.7 152 chr2L 6818102 intergenic not near genes chr2L 6818178 intergenic not near genes chr2L 6818254 intergenic not near genes chr2L_4_6815001 chr2L_6815001 EF39_1-HE 231 chr2L 6850368 6850415 chr2L 6850500 6850541 9 131 3.0 2.5 2.8 2.4 173 chr2L 6850368 intergenic not near genes chr2L 6850454 intergenic not near genes chr2L 6850541 intergenic not near genes chr2L_9_6850001 chr2L_6850001 EF39_1-HE 232 chr2L 6876752 6876809 chr2L 6882968 6883026 diver 19 6216 3.5 6.0 4.8 3.3 6274 chr2L 6876752 intron Nlg2 + chr2L 6879889 intron Nlg2 + chr2L 6883026 intron Nlg2 + chr2L_19_6875001 chr2L_6875001 EF39_1-HE 233 chr2L 6887542 6887555 chr2L 6887704 6887717 5 162 6.5 5.5 6.0 0.7 175 chr2L 6887542 intron Nlg2 + chr2L 6887630 intron Nlg2 + chr2L 6887717 intron Nlg2 + chr2L_5_6885001 chr2L_6885001 EF39_1-HE 234 chr2L 6902553 6902581 chr2L 6902657 6902685 8 104 5.5 0.5 3.0 2.0 132 chr2L 6902553 exon Nlg2 + chr2L 6902619 intron Nlg2 + chr2L 6902685 intron Nlg2 + chr2L_8_6900001 chr2L_6900001 EF39_1-HE 235 chr2L 6988546 6988599 chr2L 6988684 6988737 6 138 1.0 0.0 0.5 4.0 191 chr2L 6988546 intron uif - chr2L 6988642 intron uif - chr2L 6988737 intron uif - chr2L_6_6985001 chr2L_6985001 EF39_1-HE 236 chr2L 7072643 7072670 chr2L 7072754 7072781 4 111 4.0 4.5 4.2 0.8 138 chr2L 7072643 intron Pvf2 - chr2L 7072712 intron Pvf2 - chr2L 7072781 intron Pvf2 - chr2L_4_7070001 chr2L_7070001 EF39_1-HE 237 chr2L 7081693 7081789 chr2L 7081800 7081894 8 105 2.5 3.0 2.8 2.1 201 chr2L 7081693 intron Pvf2 - chr2L 7081794 intron Pvf2 - chr2L 7081894 intron Pvf2 - chr2L_8_7080001 chr2L_7080001 EF39_1-HE 238 chr2L 7126836 7126852 chr2L 7126941 7126957 4 105 1.5 0.0 0.8 2.2 121 chr2L 7126836 intron Pvf3 - chr2L 7126896 intron Pvf3 - chr2L 7126957 intron Pvf3 - chr2L_4_7125001 chr2L_7125001 EF39_1-HE 239 chr2L 7164542 7164588 chr2L 7164686 7164759 11 164 2.5 0.5 1.5 4.4 217 chr2L 7164542 intergenic not near genes chr2L 7164650 intergenic not near genes chr2L 7164759 intergenic not near genes chr2L_11_7160001 chr2L_7160001 EF39_1-HE 240 chr2L 7198276 7198328 chr2L 7198385 7198434 23 110 5.0 5.5 5.2 3.7 158 chr2L 7198276 intron CG4502 - chr2L 7198355 intron CG4502 - chr2L 7198434 intron CG4502 - chr2L_23_7195001 chr2L_7195001 EF39_1-HE 241 chr2L 7202426 7202473 chr2L 7202569 7202604 5 133 4.0 1.0 2.5 1.4 178 chr2L 7202426 intron CG4502 - chr2L 7202515 intron CG4502 - chr2L 7202604 intron CG4502 - chr2L_5_7200001 chr2L_7200001 EF39_1-HE 242 chr2L 7211556 7211610 chr2L 7211866 7211920 20 311 28.5 21.5 25.0 0.8 364 chr2L 7211556 intron CG13784 - chr2L 7211738 intron CG13784 - chr2L 7211920 intron CG13784 - chr2L_20_7210001 chr2L_7210001 EF39_1-HE 243 chr2L 7247124 7247126 chr2L 7247282 7247284 4 158 8.0 0.0 4.0 0.8 160 chr2L 7247124 intron Ndae1 - chr2L 7247204 intron Ndae1 - chr2L 7247284 intron Ndae1 - chr2L_4_7245001 chr2L_7245001 EF39_1-HE 244 chr2L 7295971 7296017 chr2L 7296135 7296181 8 162 7.0 2.0 4.5 1.5 210 chr2L 7295971 intergenic not near genes chr2L 7296076 intergenic not near genes chr2L 7296181 intergenic not near genes chr2L_8_7295001 chr2L_7295001 EF39_1-HE 245 chr2L 7335188 7335233 chr2L 7335311 7335356 4 123 3.0 3.0 3.0 1.0 168 chr2L 7335188 intron Wnt6 + chr2L 7335272 intron Wnt6 + chr2L 7335356 intron Wnt6 + chr2L_4_7335001 chr2L_7335001 EF39_1-HE 246 chr2L 7343304 7343351 chr2L 7350446 7350493 roo 19 7141 9.5 6.0 7.8 2.2 7189 chr2L 7343304 intron Wnt6 + chr2L 7346898 intron Wnt6 + chr2L 7350493 intron Wnt6 + chr2L_19_7345001 chr2L_7345001 EF39_1-HE 247 chr2L 7371331 7371344 chr2L 7371434 7371447 4 103 3.5 2.5 3.0 1.0 116 chr2L 7371331 intron Wnt10 + chr2L 7371389 intron Wnt10 + chr2L 7371447 intron Wnt10 + chr2L_4_7370001 chr2L_7370001 EF39_1-HE 248 chr2L 7376564 7376618 chr2L 7376803 7376857 11 239 5.5 0.5 3.0 2.8 293 chr2L 7376564 intron Wnt10 + chr2L 7376710 intron Wnt10 + chr2L 7376857 intron Wnt10 + chr2L_11_7375001 chr2L_7375001 EF39_1-HE 249 chr2L 7399283 7399334 chr2L 7399682 7399733 11 399 0.0 7.5 3.8 2.3 450 chr2L 7399283 intergenic not near genes chr2L 7399508 intergenic not near genes chr2L 7399733 intergenic not near genes chr2L_11_7395001 chr2L_7395001 EF39_1-HE 250 chr2L 7436188 7436221 chr2L 7436290 7436341 6 117 3.5 2.5 3.0 1.5 153 chr2L 7436188 intergenic not near genes chr2L 7436264 intergenic not near genes chr2L 7436341 intergenic not near genes chr2L_6_7435001 chr2L_7435001 EF39_1-HE 251 chr2L 7441505 7441553 chr2L 7441781 7441829 9 276 4.5 5.5 5.0 1.5 324 chr2L 7441505 intron CG5973 + chr2L 7441667 intron CG5973 + chr2L 7441829 intron CG5973 + chr2L_9_7440001 chr2L_7440001 EF39_1-HE 252 chr2L 7488448 7488502 chr2L 7488562 7488617 5 114 0.5 0.5 0.5 3.3 169 chr2L 7488448 intron Ziz - chr2L 7488532 intron Ziz - chr2L 7488617 intron Ziz - chr2L_5_7485001 chr2L_7485001 EF39_1-HE 253 chr2L 7493407 7493420 chr2L 7493519 7493532 6 112 0.0 8.5 4.2 1.2 125 chr2L 7493407 intron Ziz - chr2L 7493470 intron Ziz - chr2L 7493532 intron Ziz - chr2L_6_7490001 chr2L_7490001 EF39_1-HE 254 chr2L 7512885 7512924 chr2L 7512992 7513029 12 107 7.0 2.5 4.8 2.1 144 chr2L 7512885 intron RapGAP1 - chr2L 7512957 intron RapGAP1 - chr2L 7513029 intron RapGAP1 - chr2L_12_7510001 chr2L_7510001 EF39_1-HE 255 chr2L 7579169 7579209 chr2L 7579386 7579426 BS 6 217 5.0 0.0 2.5 1.7 257 chr2L 7579169 intergenic RapGAP1 - chr2L 7579298 intergenic RapGAP1 - chr2L 7579426 intergenic RapGAP1 - chr2L_6_7575001 chr2L_7575001 EF39_1-HE 256 chr2L 7585480 7585493 chr2L 7585605 7585618 5 125 5.0 0.0 2.5 1.4 138 chr2L 7585480 intergenic not near genes chr2L 7585549 intergenic not near genes chr2L 7585618 intergenic not near genes chr2L_5_7585001 chr2L_7585001 EF39_1-HE 257 chr2L 7654056 7654088 chr2L 7654161 7654193 8 104 10.5 13.0 11.8 0.6 137 chr2L 7654056 intron Slob - chr2L 7654124 intron Slob - chr2L 7654193 intron Slob - chr2L_8_7650001 chr2L_7650001 EF39_1-HE 258 chr2L 7768840 7768880 chr2L 7768942 7768982 13 102 2.5 4.5 3.5 2.9 142 chr2L 7768840 intron CG7191 + chr2L 7768911 intron CG7191 + chr2L 7768982 intron CG7191 + chr2L_13_7765001 chr2L_7765001 EF39_1-HE 259 chr2L 7811018 7811060 chr2L 7811230 7811272 4 212 0.5 0.0 0.2 3.3 254 chr2L 7811018 intergenic cdc14 -,LanB1 + chr2L 7811145 intergenic LanB1 +,cdc14 - chr2L 7811272 intergenic LanB1 + chr2L_4_7810001 chr2L_7810001 EF39_1-HE 260 chr2L 7836646 7836698 chr2L 7836769 7836821 14 122 4.0 2.5 3.2 3.3 175 chr2L 7836646 intergenic not near genes chr2L 7836734 intergenic not near genes chr2L 7836821 intergenic not near genes chr2L_14_7835001 chr2L_7835001 EF39_1-HE 261 chr2L 7893846 7893863 chr2L 7893956 7893973 10 110 0.0 7.0 3.5 2.2 127 chr2L 7893846 3` UTR Snoo - chr2L 7893910 3` UTR Snoo - chr2L 7893973 3` UTR Snoo - chr2L_10_7890001 chr2L_7890001 EF39_1-HE 262 chr2L 7922716 7922771 chr2L 7922823 7922878 8 106 2.5 1.5 2.0 2.7 162 chr2L 7922716 intron Snoo - chr2L 7922797 intron Snoo - chr2L 7922878 intron Snoo - chr2L_8_7920001 chr2L_7920001 EF39_1-HE 263 chr2L 7923014 7923032 chr2L 7923123 7923140 4 109 2.0 2.5 2.2 1.2 126 chr2L 7923014 intron Snoo - chr2L 7923077 intron Snoo - chr2L 7923140 intron Snoo - chr2L_4_7920001 chr2L_7920001 EF39_1-HE 264 chr2L 7952335 7952345 chr2L 7952439 7952449 7 103 4.5 3.0 3.8 1.5 114 chr2L 7952335 intron Snoo - chr2L 7952392 intron Snoo - chr2L 7952449 intron Snoo - chr2L_7_7950001 chr2L_7950001 EF39_1-HE 265 chr2L 7977057 7977108 chr2L 7984057 7984108 297 9 6998 8.0 6.5 7.2 1.1 7051 chr2L 7977057 intron Snoo - chr2L 7980582 intron Snoo - chr2L 7984108 intron,5` UTR Snoo -,CG7231 + chr2L_9_7980001 chr2L_7980001 EF39_1-HE 266 chr2L 8012775 8012833 chr2L 8012893 8012942 10 117 2.0 0.5 1.2 4.5 167 chr2L 8012775 intron Tg + chr2L 8012858 intron Tg + chr2L 8012942 intron Tg + chr2L_10_8010001 chr2L_8010001 EF39_1-HE 267 chr2L 8013625 8013642 chr2L 8023586 8023603 copia 5 9961 1.5 0.5 1.0 2.5 9978 chr2L 8013625 intron Tg + chr2L 8018614 intron Tg + chr2L 8023603 intron Tg + chr2L_5_8015001 chr2L_8015001 EF39_1-HE 268 chr2L 8044076 8044116 chr2L 8044181 8044221 7 105 2.0 1.5 1.8 2.5 145 chr2L 8044076 intron CG7466 + chr2L 8044148 intron CG7466 + chr2L 8044221 intron CG7466 + chr2L_7_8040001 chr2L_8040001 EF39_1-HE 269 chr2L 8152245 8152298 chr2L 8152347 8152401 6 100 0.5 2.5 1.5 2.4 156 chr2L 8152245 intron,intron CG8552 -,CG43394 + chr2L 8152323 intron,intron CG8552 -,CG43394 + chr2L 8152401 intron,intron CG8552 -,CG43394 + chr2L_6_8150001 chr2L_8150001 EF39_1-HE 270 chr2L 8171285 8171294 chr2L 8171392 8171401 5 107 0.0 8.5 4.2 1.0 116 chr2L 8171285 intron Piezo + chr2L 8171343 intron Piezo + chr2L 8171401 intron Piezo + chr2L_5_8170001 chr2L_8170001 EF39_1-HE 271 chr2L 8184899 8184950 chr2L 8185016 8185067 9 117 1.5 4.5 3.0 2.2 168 chr2L 8184899 intron Piezo + chr2L 8184983 intron Piezo + chr2L 8185067 intron Piezo + chr2L_9_8180001 chr2L_8180001 EF39_1-HE 272 chr2L 8271621 8271643 chr2L 8271723 8271745 4 102 0.0 2.0 1.0 2.0 124 chr2L 8271621 intron Btk29A - chr2L 8271683 intron Btk29A - chr2L 8271745 intron Btk29A - chr2L_4_8270001 chr2L_8270001 EF39_1-HE 273 chr2L 8284996 8285030 chr2L 8285096 8285132 10 102 9.0 5.0 7.0 1.2 136 chr2L 8284996 intron Btk29A - chr2L 8285064 intron Btk29A - chr2L 8285132 intron Btk29A - chr2L_10_8285001 chr2L_8285001 EF39_1-HE 274 chr2L 8351551 8351587 chr2L 8351654 8351690 5 103 0.0 6.0 3.0 1.2 139 chr2L 8351551 intergenic CG7778 + chr2L 8351620 intergenic not near genes chr2L 8351690 intergenic Mur29B + chr2L_5_8350001 chr2L_8350001 EF39_1-HE 275 chr2L 8411754 8411813 chr2L 8411941 8411997 9 187 2.0 1.5 1.8 3.2 243 chr2L 8411754 5` UTR CG13397 - chr2L 8411876 intergenic CG13397 -,CG13398 - chr2L 8411997 intergenic CG13397 -,CG13398 - chr2L_9_8410001 chr2L_8410001 EF39_1-HE 276 chr2L 8445910 8445966 chr2L 8446021 8446077 19 110 3.0 6.5 4.8 3.3 167 chr2L 8445910 3` UTR U26 - chr2L 8445994 3` UTR U26 - chr2L 8446077 3` UTR U26 - chr2L_19_8445001 chr2L_8445001 EF39_1-HE 277 chr2L 8461648 8461688 chr2L 8461786 8461826 9 138 3.0 2.5 2.8 2.4 178 chr2L 8461648 intron fu12 - chr2L 8461737 intron fu12 - chr2L 8461826 intron fu12 - chr2L_9_8460001 chr2L_8460001 EF39_1-HE 278 chr2L 8498184 8498235 chr2L 8498291 8498342 7 106 2.0 0.5 1.2 3.2 158 chr2L 8498184 intron Dh31 - chr2L 8498263 intron Dh31 - chr2L 8498342 intron Dh31 - chr2L_7_8495001 chr2L_8495001 EF39_1-HE 279 chr2L 8508977 8509005 chr2L 8509105 8509133 9 128 0.5 2.5 1.5 3.6 156 chr2L 8508977 intergenic CG13096 - chr2L 8509055 intergenic CG13096 - chr2L 8509133 3` UTR CG13096 - chr2L_9_8505001 chr2L_8505001 EF39_1-HE 280 chr2L 8551410 8551428 chr2L 8551651 8551669 6 241 3.5 2.0 2.8 1.6 259 chr2L 8551410 intron Sema-1a + chr2L 8551540 intron Sema-1a + chr2L 8551669 intron Sema-1a + chr2L_6_8550001 chr2L_8550001 EF39_1-HE 281 chr2L 8554349 8554375 chr2L 8554471 8554497 6 122 6.5 8.0 7.2 0.7 148 chr2L 8554349 intron Sema-1a + chr2L 8554423 intron Sema-1a + chr2L 8554497 intron Sema-1a + chr2L_6_8550001 chr2L_8550001 EF39_1-HE 282 chr2L 8612829 8612870 chr2L 8612932 8612973 10 103 3.5 4.0 3.8 2.1 144 chr2L 8612829 intron Sema-1a + chr2L 8612901 intron Sema-1a + chr2L 8612973 intron Sema-1a + chr2L_10_8610001 chr2L_8610001 EF39_1-HE 283 chr2L 8629239 8629293 chr2L 8629343 8629397 21 104 9.0 6.5 7.8 2.4 158 chr2L 8629239 intron Sema-1a + chr2L 8629318 intron Sema-1a + chr2L 8629397 intron Sema-1a + chr2L_21_8625001 chr2L_8625001 EF39_1-HE 284 chr2L 8640110 8640163 chr2L 8640214 8640267 24 101 6.0 5.5 5.8 3.5 157 chr2L 8640110 intron Sema-1a + chr2L 8640188 intron Sema-1a + chr2L 8640267 intron Sema-1a + chr2L_24_8640001 chr2L_8640001 EF39_1-HE 285 chr2L 8641530 8641551 chr2L 8641631 8641653 6 100 1.0 3.0 2.0 2.0 123 chr2L 8641530 intron Sema-1a + chr2L 8641592 intron Sema-1a + chr2L 8641653 intron Sema-1a + chr2L_6_8640001 chr2L_8640001 EF39_1-HE 286 chr2L 8654207 8654243 chr2L 8654332 8654356 10 128 3.0 4.0 3.5 2.2 149 chr2L 8654207 exon Sema-1a + chr2L 8654282 intron Sema-1a + chr2L 8654356 intron Sema-1a + chr2L_10_8650001 chr2L_8650001 EF39_1-HE 287 chr2L 8723096 8723129 chr2L 8731499 8731532 Tirant 14 8403 4.0 4.5 4.2 2.7 8436 chr2L 8723096 intron raw - chr2L 8727314 intron raw - chr2L 8731532 intron raw - chr2L_14_8725001 chr2L_8725001 EF39_1-HE 288 chr2L 8758729 8758775 chr2L 8758973 8759027 13 246 0.0 3.5 1.8 4.6 298 chr2L 8758729 intergenic not near genes chr2L 8758878 intergenic not near genes chr2L 8759027 intergenic not near genes chr2L_13_8755001 chr2L_8755001 EF39_1-HE 289 chr2L 8788726 8788768 chr2L 8788832 8788876 9 107 3.0 4.5 3.8 1.9 150 chr2L 8788726 intergenic not near genes chr2L 8788801 intergenic not near genes chr2L 8788876 intergenic not near genes chr2L_9_8785001 chr2L_8785001 EF39_1-HE 290 chr2L 8857245 8857297 chr2L 8857412 8857464 20 167 5.0 6.5 5.8 2.9 219 chr2L 8857245 intergenic not near genes chr2L 8857354 intergenic not near genes chr2L 8857464 intergenic not near genes chr2L_20_8855001 chr2L_8855001 EF39_1-HE 291 chr2L 8965329 8965376 chr2L 8965432 8965478 13 103 5.5 3.5 4.5 2.4 149 chr2L 8965329 exon CG32984 + chr2L 8965404 intron CG32984 + chr2L 8965478 exon CG32984 + chr2L_13_8965001 chr2L_8965001 EF39_1-HE 292 chr2L 8980432 8980440 chr2L 8980547 8980555 4 115 8.0 0.0 4.0 0.8 123 chr2L 8980432 intron CG13101 - chr2L 8980494 intron CG13101 - chr2L 8980555 intron CG13101 - chr2L_4_8980001 chr2L_8980001 EF39_1-HE 293 chr2L 8987958 8987987 chr2L 8988072 8988101 4 114 2.5 4.5 3.5 0.9 143 chr2L 8987958 intron rost - chr2L 8988030 intron rost - chr2L 8988101 intron rost - chr2L_4_8985001 chr2L_8985001 EF39_1-HE 294 chr2L 9000262 9000305 chr2L 9007798 9007841 roo 9 7536 4.0 0.0 2.0 3.0 7579 chr2L 9000262 intergenic Try29F + chr2L 9004052 intergenic not near genes chr2L 9007841 intergenic not near genes chr2L_9_9000001 chr2L_9000001 EF39_1-HE 295 chr2L 9010443 9010482 chr2L 9010563 9010602 8 120 2.5 2.5 2.5 2.3 159 chr2L 9010443 intergenic CG9568 + chr2L 9010522 intergenic CG9568 + chr2L 9010602 5` UTR CG9568 + chr2L_8_9010001 chr2L_9010001 EF39_1-HE 296 chr2L 9040863 9040912 chr2L 9040965 9041014 19 100 4.5 3.5 4.0 3.8 151 chr2L 9040863 intergenic not near genes chr2L 9040938 intergenic not near genes chr2L 9041014 intergenic not near genes chr2L_19_9040001 chr2L_9040001 EF39_1-HE 297 chr2L 9053374 9053410 chr2L 9053480 9053516 13 106 9.0 0.0 4.5 2.4 142 chr2L 9053374 exon CG31708 - chr2L 9053445 intron CG31708 - chr2L 9053516 intron CG31708 - chr2L_13_9050001 chr2L_9050001 EF39_1-HE 298 chr2L 9073261 9073300 chr2L 9073373 9073412 11 111 2.5 11.5 7.0 1.4 151 chr2L 9073261 intergenic not near genes chr2L 9073336 intergenic not near genes chr2L 9073412 intergenic not near genes chr2L_11_9070001 chr2L_9070001 EF39_1-HE 299 chr2L 9098144 9098202 chr2L 9098255 9098313 23 111 3.5 5.0 4.2 4.4 169 chr2L 9098144 3` UTR CG31609 + chr2L 9098228 intergenic CG31609 + chr2L 9098313 intergenic CG31609 + chr2L_23_9095001 chr2L_9095001 EF39_1-HE 300 chr2L 9099196 9099240 chr2L 9099327 9099371 6 131 5.0 1.5 3.2 1.4 175 chr2L 9099196 intergenic CR44482 + chr2L 9099284 intergenic CR44482 + chr2L 9099371 intergenic CR44482 + chr2L_6_9095001 chr2L_9095001 EF39_1-HE 301 chr2L 9120053 9120101 chr2L 9120180 9120228 5 127 3.0 4.0 3.5 1.1 175 chr2L 9120053 intergenic CR44617 + chr2L 9120140 intergenic CR44617 + chr2L 9120228 intergenic CR44617 + chr2L_5_9120001 chr2L_9120001 EF39_1-HE 302 chr2L 9122158 9122216 chr2L 9122327 9122384 9 168 2.5 2.0 2.2 2.8 226 chr2L 9122158 intergenic CR44616 - chr2L 9122271 intergenic CR44616 - chr2L 9122384 intergenic CR44616 - chr2L_9_9120001 chr2L_9120001 EF39_1-HE 303 chr2L 9149237 9149263 chr2L 9149368 9149394 7 131 3.5 5.5 4.5 1.3 157 chr2L 9149237 intron CG32982 + chr2L 9149316 intron CG32982 + chr2L 9149394 intron CG32982 + chr2L_7_9145001 chr2L_9145001 EF39_1-HE 304 chr2L 9158768 9158789 chr2L 9158891 9158912 4 123 2.0 0.0 1.0 2.0 144 chr2L 9158768 intron CG32982 + chr2L 9158840 intron CG32982 + chr2L 9158912 intron CG32982 + chr2L_4_9155001 chr2L_9155001 EF39_1-HE 305 chr2L 9170973 9170987 chr2L 9171095 9171109 6 122 6.0 9.5 7.8 0.7 136 chr2L 9170973 intron tai + chr2L 9171041 intron tai + chr2L 9171109 intron tai + chr2L_6_9170001 chr2L_9170001 EF39_1-HE 306 chr2L 9186102 9186152 chr2L 9186371 9186421 17 269 3.0 2.0 2.5 4.9 319 chr2L 9186102 intron tai + chr2L 9186262 intron tai + chr2L 9186421 intron tai + chr2L_17_9185001 chr2L_9185001 EF39_1-HE 307 chr2L 9204719 9204751 chr2L 9204841 9204873 6 122 3.5 0.0 1.8 2.1 154 chr2L 9204719 intron tai + chr2L 9204796 intron tai + chr2L 9204873 intron tai + chr2L_6_9200001 chr2L_9200001 EF39_1-HE 308 chr2L 9210070 9210097 chr2L 9210453 9210482 7 384 4.5 9.0 6.8 0.9 412 chr2L 9210070 intron tai + chr2L 9210276 intron tai + chr2L 9210482 intron tai + chr2L_7_9210001 chr2L_9210001 EF39_1-HE 309 chr2L 9217967 9217975 chr2L 9222780 9222788 Doc 5 4813 4.5 0.0 2.2 1.6 4821 chr2L 9217967 intron tai + chr2L 9220378 intron tai + chr2L 9222788 intron tai + chr2L_5_9220001 chr2L_9220001 EF39_1-HE 310 chr2L 9225412 9225423 chr2L 9225513 9225526 4 103 5.5 10.0 7.8 0.5 114 chr2L 9225412 intron tai + chr2L 9225469 intron tai + chr2L 9225526 intron tai + chr2L_4_9225001 chr2L_9225001 EF39_1-HE 311 chr2L 9225836 9225881 chr2L 9225952 9225997 19 115 7.5 6.0 6.8 2.4 161 chr2L 9225836 intron tai + chr2L 9225916 intron tai + chr2L 9225997 intron tai + chr2L_19_9225001 chr2L_9225001 EF39_1-HE 312 chr2L 9259189 9259243 chr2L 9259308 9259362 13 119 4.0 4.0 4.0 2.6 173 chr2L 9259189 intron Ggamma30A + chr2L 9259276 intron Ggamma30A + chr2L 9259362 intron Ggamma30A + chr2L_13_9255001 chr2L_9255001 EF39_1-HE 313 chr2L 9279967 9279977 chr2L 9280087 9280097 4 120 7.5 2.5 5.0 0.7 130 chr2L 9279967 intron Ggamma30A + chr2L 9280032 intron Ggamma30A + chr2L 9280097 intron Ggamma30A + chr2L_4_9280001 chr2L_9280001 EF39_1-HE 314 chr2L 9279982 9280018 chr2L 9280085 9280138 7 117 2.5 2.5 2.5 2.0 156 chr2L 9279982 intron Ggamma30A + chr2L 9280060 intron Ggamma30A + chr2L 9280138 intron Ggamma30A + chr2L_7_9280001 chr2L_9280001 EF39_1-HE 315 chr2L 9297352 9297404 chr2L 9297455 9297507 24 103 4.0 7.0 5.5 3.7 155 chr2L 9297352 3` UTR Ggamma30A + chr2L 9297430 3` UTR Ggamma30A + chr2L 9297507 3` UTR Ggamma30A + chr2L_24_9295001 chr2L_9295001 EF39_1-HE 316 chr2L 9300673 9300690 chr2L 9300784 9300801 5 111 0.0 0.0 0.0 5.0 128 chr2L 9300673 3` UTR Ggamma30A + chr2L 9300737 3` UTR Ggamma30A + chr2L 9300801 3` UTR Ggamma30A + chr2L_5_9300001 chr2L_9300001 EF39_1-HE 317 chr2L 9302158 9302192 chr2L 9302279 9302313 10 121 4.0 6.5 5.2 1.6 155 chr2L 9302158 3` UTR Ggamma30A + chr2L 9302236 3` UTR Ggamma30A + chr2L 9302313 3` UTR Ggamma30A + chr2L_10_9300001 chr2L_9300001 EF39_1-HE 318 chr2L 9304329 9304372 chr2L 9304439 9304482 8 110 2.5 2.0 2.2 2.5 153 chr2L 9304329 intergenic CR42844 - chr2L 9304406 intergenic CR42844 - chr2L 9304482 3` UTR CR42844 - chr2L_8_9300001 chr2L_9300001 EF39_1-HE 319 chr2L 9310226 9310273 chr2L 9310335 9310386 14 113 3.5 6.5 5.0 2.3 160 chr2L 9310226 intergenic not near genes chr2L 9310306 intergenic not near genes chr2L 9310386 intergenic not near genes chr2L_14_9310001 chr2L_9310001 EF39_1-HE 320 chr2L 9337888 9337901 chr2L 9337991 9338004 6 103 5.0 3.5 4.2 1.2 116 chr2L 9337888 intron Eaat1 + chr2L 9337946 intron Eaat1 + chr2L 9338004 intron Eaat1 + chr2L_6_9335001 chr2L_9335001 EF39_1-HE 321 chr2L 9347606 9347618 chr2L 9347726 9347738 5 120 4.5 4.5 4.5 0.9 132 chr2L 9347606 intergenic not near genes chr2L 9347672 intergenic not near genes chr2L 9347738 intergenic not near genes chr2L_5_9345001 chr2L_9345001 EF39_1-HE 322 chr2L 9387226 9387274 chr2L 9387350 9387398 9 124 2.0 2.5 2.2 2.8 172 chr2L 9387226 intron Shawl - chr2L 9387312 intron Shawl - chr2L 9387398 intron,5` UTR Shawl -,Aldh + chr2L_9_9385001 chr2L_9385001 EF39_1-HE 323 chr2L 9393471 9393525 chr2L 9396464 9396518 jockey 14 2992 1.5 3.5 2.5 4.0 3047 chr2L 9393471 intron Shawl - chr2L 9394994 intron Shawl - chr2L 9396518 intron Shawl - chr2L_14_9390001 chr2L_9390001 EF39_1-HE 324 chr2L 9407882 9407903 chr2L 9407990 9408011 9 108 7.0 5.5 6.2 1.2 129 chr2L 9407882 intron Shawl - chr2L 9407946 intron Shawl - chr2L 9408011 intron Shawl - chr2L_9_9405001 chr2L_9405001 EF39_1-HE 325 chr2L 9439597 9439646 chr2L 9439701 9439749 7 104 2.5 0.0 1.2 3.2 152 chr2L 9439597 intron numb + chr2L 9439673 intron numb + chr2L 9439749 intron numb + chr2L_7_9435001 chr2L_9435001 EF39_1-HE 326 chr2L 9474758 9474803 chr2L 9474878 9474923 9 120 0.5 1.5 1.0 4.5 165 chr2L 9474758 intergenic not near genes chr2L 9474840 intergenic not near genes chr2L 9474923 intergenic not near genes chr2L_9_9470001 chr2L_9470001 EF39_1-HE 327 chr2L 9532895 9532947 chr2L 9533029 9533081 21 132 6.5 10.0 8.2 2.3 186 chr2L 9532895 intron Oatp30B + chr2L 9532988 intron Oatp30B + chr2L 9533081 intron Oatp30B + chr2L_21_9530001 chr2L_9530001 EF39_1-HE 328 chr2L 9685581 9685587 chr2L 9685684 9685690 4 103 0.0 0.0 0.0 4.0 109 chr2L 9685581 intron Pka-C1 - chr2L 9685636 intron Pka-C1 - chr2L 9685690 intron Pka-C1 - chr2L_4_9685001 chr2L_9685001 EF39_1-HE 329 chr2L 9770751 9770778 chr2L 9770880 9770903 1360 5 128 3.5 3.5 3.5 1.1 152 chr2L 9770751 intron ppk18 - chr2L 9770827 intron ppk18 - chr2L 9770903 exon ppk18 - chr2L_5_9770001 chr2L_9770001 EF39_1-HE 330 chr2L 9804685 9804742 chr2L 9805074 9805131 17 389 5.0 4.0 4.5 3.1 446 chr2L 9804685 intron nAChRalpha6 - chr2L 9804908 intron nAChRalpha6 - chr2L 9805131 intron nAChRalpha6 - chr2L_17_9800001 chr2L_9800001 EF39_1-HE 331 chr2L 9886567 9886622 chr2L 9886671 9886725 7 103 2.0 0.5 1.2 3.2 158 chr2L 9886567 intergenic nAChRalpha6 -,CR44701 + chr2L 9886646 intergenic CR44701 +,nAChRalpha6 - chr2L 9886725 intergenic CR44701 +,nAChRalpha6 - chr2L_7_9885001 chr2L_9885001 EF39_1-HE 332 chr2L 9892483 9892527 chr2L 9892585 9892629 7 102 1.5 2.0 1.8 2.5 146 chr2L 9892483 intron mtDNA-helicase - chr2L 9892556 intron mtDNA-helicase - chr2L 9892629 intron mtDNA-helicase - chr2L_7_9890001 chr2L_9890001 EF39_1-HE 333 chr2L 9970851 9970877 chr2L 9970991 9971017 9 140 0.0 0.0 0.0 9.0 166 chr2L 9970851 intergenic not near genes chr2L 9970934 intergenic not near genes chr2L 9971017 intergenic not near genes chr2L_9_9970001 chr2L_9970001 EF39_1-HE 334 chr2L 9973714 9973745 chr2L 9980859 9980884 HMS-Beagle 8 7144 6.0 6.5 6.2 1.1 7170 chr2L 9973714 intergenic not near genes chr2L 9977299 intergenic not near genes chr2L 9980884 intergenic not near genes chr2L_8_9975001 chr2L_9975001 EF39_1-HE 335 chr2L 9986327 9986380 chr2L 9986448 9986501 16 118 3.5 3.0 3.2 3.8 174 chr2L 9986327 intron bib + chr2L 9986414 intron bib + chr2L 9986501 intron bib + chr2L_16_9985001 chr2L_9985001 EF39_1-HE 336 chr2L 10094702 10094727 chr2L 10094818 10094844 4 117 0.0 2.5 1.2 1.8 142 chr2L 10094702 intron CG44153 - chr2L 10094773 intron CG44153 - chr2L 10094844 intron CG44153 - chr2L_4_10090001 chr2L_10090001 EF39_1-HE 337 chr2L 10126553 10126601 chr2L 10126656 10126704 17 103 7.0 5.5 6.2 2.4 151 chr2L 10126553 intron CG44153 - chr2L 10126628 intron CG44153 - chr2L 10126704 intron CG44153 - chr2L_17_10125001 chr2L_10125001 EF39_1-HE 338 chr2L 10138165 10138192 chr2L 10143435 10143462 Rt1c 8 5270 3.5 6.5 5.0 1.3 5297 chr2L 10138165 intron CG44153 - chr2L 10140814 intron CG44153 - chr2L 10143462 intron CG44153 - chr2L_8_10140001 chr2L_10140001 EF39_1-HE 339 chr2L 10156303 10156350 chr2L 10163798 10163845 blood 10 7495 4.5 3.5 4.0 2.0 7542 chr2L 10156303 intron,3` UTR CG44153 -,CG4839 + chr2L 10160074 intron CG44153 - chr2L 10163845 intron CG44153 - chr2L_10_10160001 chr2L_10160001 EF39_1-HE 340 chr2L 10177902 10177930 chr2L 10178005 10178033 6 103 2.5 4.0 3.2 1.4 131 chr2L 10177902 intron CG44153 - chr2L 10177968 intron CG44153 - chr2L 10178033 intron CG44153 - chr2L_6_10175001 chr2L_10175001 EF39_1-HE 341 chr2L 10179899 10179950 chr2L 10180019 10180070 18 120 1.5 4.0 2.8 4.7 171 chr2L 10179899 intron CG44153 - chr2L 10179984 intron CG44153 - chr2L 10180070 intron CG44153 - chr2L_18_10175001 chr2L_10175001 EF39_1-HE 342 chr2L 10232913 10232945 chr2L 10233017 10233049 7 103 2.5 5.5 4.0 1.4 136 chr2L 10232913 intron eEF1delta + chr2L 10232981 intron eEF1delta + chr2L 10233049 intron eEF1delta + chr2L_7_10230001 chr2L_10230001 EF39_1-HE 343 chr2L 10276175 10276208 chr2L 10276279 10276312 10 104 4.0 3.0 3.5 2.2 137 chr2L 10276175 intron Utx - chr2L 10276244 intron Utx - chr2L 10276312 intron Utx - chr2L_10_10275001 chr2L_10275001 EF39_1-HE 344 chr2L 10294654 10294688 chr2L 10294766 10294800 7 112 3.0 5.0 4.0 1.4 146 chr2L 10294654 intron Hand - chr2L 10294727 intron Hand - chr2L 10294800 intron Hand - chr2L_7_10290001 chr2L_10290001 EF39_1-HE 345 chr2L 10458187 10458217 chr2L 10458309 10458339 12 121 0.0 2.5 1.2 5.5 152 chr2L 10458187 intron LM408 + chr2L 10458263 intron LM408 + chr2L 10458339 intron LM408 + chr2L_12_10455001 chr2L_10455001 EF39_1-HE 346 chr2L 10495288 10495420 chr2L 10495391 10495584 9 141 1.0 0.5 0.8 5.0 296 chr2L 10495288 intron Myo31DF - chr2L 10495436 intron Myo31DF - chr2L 10495584 intron Myo31DF - chr2L_9_10495001 chr2L_10495001 EF39_1-HE 347 chr2L 10531589 10531628 chr2L 10531707 10531746 12 118 0.0 2.5 1.2 5.5 157 chr2L 10531589 3` UTR Lip4 + chr2L 10531668 3` UTR Lip4 + chr2L 10531746 3` UTR Lip4 + chr2L_12_10530001 chr2L_10530001 EF39_1-HE 348 chr2L 10549682 10549736 chr2L 10549800 10549854 13 118 2.5 2.0 2.2 4.1 172 chr2L 10549682 intron Trim9 + chr2L 10549768 intron Trim9 + chr2L 10549854 intron Trim9 + chr2L_13_10545001 chr2L_10545001 EF39_1-HE 349 chr2L 10555760 10555790 chr2L 10555842 10555856 15 99 6.5 4.5 5.5 2.3 96 chr2L 10555760 intron Trim9 + chr2L 10555808 intron Trim9 + chr2L 10555856 intron Trim9 + chr2L_15_10555001 chr2L_10555001 EF39_1-HE 350 chr2L 10558523 10558581 chr2L 10558637 10558671 21 109 3.0 1.0 2.0 7.0 148 chr2L 10558523 intron Trim9 + chr2L 10558597 intron Trim9 + chr2L 10558671 intron Trim9 + chr2L_21_10555001 chr2L_10555001 EF39_1-HE 351 chr2L 10574542 10574595 chr2L 10574665 10574718 14 123 5.0 3.5 4.2 2.7 176 chr2L 10574542 intron Trim9 + chr2L 10574630 intron Trim9 + chr2L 10574718 intron Trim9 + chr2L_14_10570001 chr2L_10570001 EF39_1-HE 352 chr2L 10592815 10592864 chr2L 10600503 10600552 opus 8 7688 8.5 5.0 6.8 1.0 7737 chr2L 10592815 intron Trim9 + chr2L 10596684 intron Trim9 + chr2L 10600552 intron Trim9 + chr2L_8_10595001 chr2L_10595001 EF39_1-HE 353 chr2L 10604190 10604218 chr2L 10604298 10604326 14 107 6.5 4.5 5.5 2.2 136 chr2L 10604190 intron Trim9 + chr2L 10604258 intron Trim9 + chr2L 10604326 intron Trim9 + chr2L_14_10600001 chr2L_10600001 EF39_1-HE 354 chr2L 10649999 10650035 chr2L 10650105 10650141 5 106 3.5 1.5 2.5 1.4 142 chr2L 10649999 exon CG17097 + chr2L 10650070 3` UTR CG17097 + chr2L 10650141 3` UTR CG17097 + chr2L_5_10650001 chr2L_10650001 EF39_1-HE 355 chr2L 10656576 10656603 chr2L 10656678 10656705 5 102 3.0 4.5 3.8 1.0 129 chr2L 10656576 intergenic not near genes chr2L 10656640 intergenic not near genes chr2L 10656705 intergenic not near genes chr2L_5_10655001 chr2L_10655001 EF39_1-HE 356 chr2L 10682019 10682046 chr2L 10682152 10682178 13 141 8.5 9.0 8.8 1.3 159 chr2L 10682019 exon CG17107 + chr2L 10682098 exon CG17107 + chr2L 10682178 exon CG17107 + chr2L_13_10680001 chr2L_10680001 EF39_1-HE 357 chr2L 10698102 10698154 chr2L 10698211 10698263 6 109 2.0 2.5 2.2 1.9 161 chr2L 10698102 5` UTR CR44181 + chr2L 10698182 5` UTR CR44181 + chr2L 10698263 intergenic CR44181 +,CG7300 - chr2L_6_10695001 chr2L_10695001 EF39_1-HE 358 chr2L 10704927 10704948 chr2L 10705048 10705069 12 121 1.0 5.0 3.0 3.0 142 chr2L 10704927 intron,3` UTR Lip2 -,CG6415 + chr2L 10704998 intron Lip2 - chr2L 10705069 exon Lip2 - chr2L_12_10700001 chr2L_10700001 EF39_1-HE 359 chr2L 10705440 10705477 chr2L 10705549 10705586 13 109 2.0 4.0 3.0 3.2 146 chr2L 10705440 exon Lip2 - chr2L 10705513 intron Lip2 - chr2L 10705586 intron Lip2 - chr2L_13_10705001 chr2L_10705001 EF39_1-HE 360 chr2L 10752371 10752384 chr2L 10752537 10752550 4 166 4.5 3.0 3.8 0.8 179 chr2L 10752371 intron CG17124 - chr2L 10752460 intron CG17124 - chr2L 10752550 intron CG17124 - chr2L_4_10750001 chr2L_10750001 EF39_1-HE 361 chr2L 10762393 10762429 chr2L 10762496 10762532 7 103 5.5 3.0 4.2 1.3 139 chr2L 10762393 intron CG6495 + chr2L 10762462 intron CG6495 + chr2L 10762532 exon CG6495 + chr2L_7_10760001 chr2L_10760001 EF39_1-HE 362 chr2L 10787959 10788028 chr2L 10788077 10788130 6 105 0.5 1.0 0.8 3.3 171 chr2L 10787959 intron CG31869 - chr2L 10788044 intron CG31869 - chr2L 10788130 intron CG31869 - chr2L_6_10785001 chr2L_10785001 EF39_1-HE 363 chr2L 10793299 10793347 chr2L 10793402 10793450 9 103 1.5 3.5 2.5 2.6 151 chr2L 10793299 intron CG31869 - chr2L 10793374 intron CG31869 - chr2L 10793450 intron CG31869 - chr2L_9_10790001 chr2L_10790001 EF39_1-HE 364 chr2L 10817258 10817277 chr2L 10817365 10817383 5 107 8.5 5.0 6.8 0.6 125 chr2L 10817258 intron Nos - chr2L 10817320 intron Nos - chr2L 10817383 intron Nos - chr2L_5_10815001 chr2L_10815001 EF39_1-HE 365 chr2L 10892425 10892434 chr2L 10892833 10892843 5 409 6.5 1.0 3.8 1.0 418 chr2L 10892425 intergenic not near genes chr2L 10892634 intergenic not near genes chr2L 10892843 intergenic not near genes chr2L_5_10890001 chr2L_10890001 EF39_1-HE 366 chr2L 10946927 10946972 chr2L 10956167 10956213 roo 13 9241 7.0 8.5 7.8 1.5 9286 chr2L 10946927 intron dpr2 - chr2L 10951570 intron dpr2 - chr2L 10956213 intron dpr2 - chr2L_13_10950001 chr2L_10950001 EF39_1-HE 367 chr2L 11083125 11083155 chr2L 11083228 11083258 7 103 8.0 5.5 6.8 0.9 133 chr2L 11083125 intergenic AstCC - chr2L 11083192 intergenic AstCC - chr2L 11083258 intergenic AstCC - chr2L_7_11080001 chr2L_11080001 EF39_1-HE 368 chr2L 11144550 11144594 chr2L 11144713 11144757 5 163 3.0 4.5 3.8 1.0 207 chr2L 11144550 intron Gyc32E - chr2L 11144654 intron,3` UTR Gyc32E -,CG31867 - chr2L 11144757 intron,exon Gyc32E -,CG31867 - chr2L_5_11140001 chr2L_11140001 EF39_1-HE 369 chr2L 11193589 11193596 chr2L 11193709 11193716 4 120 0.0 12.5 6.2 0.6 127 chr2L 11193589 intron Ca-beta - chr2L 11193652 intron Ca-beta - chr2L 11193716 intron Ca-beta - chr2L_4_11190001 chr2L_11190001 EF39_1-HE 370 chr2L 11225255 11225295 chr2L 11225379 11225419 16 123 7.0 5.5 6.2 2.2 164 chr2L 11225255 intron ab + chr2L 11225337 intron ab + chr2L 11225419 intron ab + chr2L_16_11225001 chr2L_11225001 EF39_1-HE 371 chr2L 11315250 11315271 chr2L 11317680 11317701 G2 8 2430 3.5 0.0 1.8 2.9 2451 chr2L 11315250 intergenic not near genes chr2L 11316476 intergenic not near genes chr2L 11317701 intergenic not near genes chr2L_8_11315001 chr2L_11315001 EF39_1-HE 372 chr2L 11450108 11450152 chr2L 11450220 11450260 12 111 0.0 5.5 2.8 3.2 152 chr2L 11450108 intergenic not near genes chr2L 11450184 intergenic not near genes chr2L 11450260 intergenic not near genes chr2L_12_11450001 chr2L_11450001 EF39_1-HE 373 chr2L 11459955 11459994 chr2L 11460069 11460108 11 114 5.0 4.5 4.8 1.9 153 chr2L 11459955 intergenic not near genes chr2L 11460032 intergenic not near genes chr2L 11460108 intergenic not near genes chr2L_11_11460001 chr2L_11460001 EF39_1-HE 374 chr2L 11492989 11492995 chr2L 11493155 11493161 5 166 1.0 4.0 2.5 1.4 172 chr2L 11492989 intergenic not near genes chr2L 11493075 intergenic not near genes chr2L 11493161 intergenic not near genes chr2L_5_11490001 chr2L_11490001 EF39_1-HE 375 chr2L 11494173 11494227 chr2L 11494289 11494343 19 114 4.5 6.5 5.5 2.9 170 chr2L 11494173 intergenic not near genes chr2L 11494258 intergenic not near genes chr2L 11494343 intergenic not near genes chr2L_19_11490001 chr2L_11490001 EF39_1-HE 376 chr2L 11537163 11537185 chr2L 11537270 11537282 8 105 9.5 11.5 10.5 0.7 119 chr2L 11537163 intergenic CG43438 + chr2L 11537222 intergenic CG43438 + chr2L 11537282 intergenic CG43438 + chr2L_8_11535001 chr2L_11535001 EF39_1-HE 377 chr2L 11537725 11537773 chr2L 11537868 11537916 14 143 9.0 2.0 5.5 2.2 191 chr2L 11537725 intergenic not near genes chr2L 11537820 intergenic not near genes chr2L 11537916 intergenic not near genes chr2L_14_11535001 chr2L_11535001 EF39_1-HE 378 chr2L 11540560 11540613 chr2L 11547988 11548041 Tabor 12 7426 2.0 4.0 3.0 3.0 7481 chr2L 11540560 intergenic not near genes chr2L 11544300 intergenic not near genes chr2L 11548041 intergenic not near genes chr2L_12_11540001 chr2L_11540001 EF39_1-HE 379 chr2L 11563617 11563645 chr2L 11568848 11568876 copia 6 5231 6.0 4.0 5.0 1.0 5259 chr2L 11563617 intergenic not near genes chr2L 11566246 intergenic not near genes chr2L 11568876 intergenic not near genes chr2L_6_11565001 chr2L_11565001 EF39_1-HE 380 chr2L 11608916 11608963 chr2L 11609022 11609069 9 106 4.0 4.0 4.0 1.8 153 chr2L 11608916 intron kek2 + chr2L 11608992 intron kek2 + chr2L 11609069 intron kek2 + chr2L_9_11605001 chr2L_11605001 EF39_1-HE 381 chr2L 11614036 11614083 chr2L 11615545 11615604 hopper2 10 1519 2.5 5.0 3.8 2.1 1568 chr2L 11614036 intron kek2 + chr2L 11614820 intron kek2 + chr2L 11615604 intron kek2 + chr2L_10_11610001 chr2L_11610001 EF39_1-HE 382 chr2L 11618525 11618568 chr2L 11618642 11618685 9 116 4.0 0.0 2.0 3.0 160 chr2L 11618525 intron kek2 + chr2L 11618605 intron kek2 + chr2L 11618685 intron kek2 + chr2L_9_11615001 chr2L_11615001 EF39_1-HE 383 chr2L 11638474 11638519 chr2L 11638580 11638625 13 106 4.5 3.0 3.8 2.7 151 chr2L 11638474 intergenic not near genes chr2L 11638550 intergenic not near genes chr2L 11638625 intergenic not near genes chr2L_13_11635001 chr2L_11635001 EF39_1-HE 384 chr2L 11644187 11644222 chr2L 11644291 11644327 13 105 14.5 12.5 13.5 0.9 140 chr2L 11644187 intergenic CG6614 - chr2L 11644257 intergenic CG6614 - chr2L 11644327 intergenic CG6614 - chr2L_13_11640001 chr2L_11640001 EF39_1-HE 385 chr2L 11713487 11713540 chr2L 11720981 11721024 blood 15 7493 1.5 5.0 3.2 3.6 7537 chr2L 11713487 intergenic not near genes chr2L 11717256 intergenic not near genes chr2L 11721024 intergenic CR44143 + chr2L_15_11715001 chr2L_11715001 EF39_1-HE 386 chr2L 11721239 11721288 chr2L 11721346 11721395 23 106 3.0 1.5 2.2 7.2 156 chr2L 11721239 intergenic CR44143 + chr2L 11721317 5` UTR CR44143 + chr2L 11721395 5` UTR CR44143 + chr2L_23_11720001 chr2L_11720001 EF39_1-HE 387 chr2L 11770460 11770501 chr2L 11770695 11770737 8 235 4.5 4.0 4.2 1.5 277 chr2L 11770460 intergenic not near genes chr2L 11770598 intergenic not near genes chr2L 11770737 intergenic not near genes chr2L_8_11770001 chr2L_11770001 EF39_1-HE 388 chr2L 11779442 11779478 chr2L 11779550 11779586 4 108 3.5 3.0 3.2 1.0 144 chr2L 11779442 intergenic not near genes chr2L 11779514 intergenic not near genes chr2L 11779586 intergenic not near genes chr2L_4_11775001 chr2L_11775001 EF39_1-HE 389 chr2L 11786886 11786936 chr2L 11787011 11787061 8 125 2.5 3.0 2.8 2.1 175 chr2L 11786886 intergenic not near genes chr2L 11786974 intergenic not near genes chr2L 11787061 intergenic not near genes chr2L_8_11785001 chr2L_11785001 EF39_1-HE 390 chr2L 11808637 11808694 chr2L 11808741 11808797 13 104 6.0 8.0 7.0 1.6 160 chr2L 11808637 intron crol - chr2L 11808717 intron crol - chr2L 11808797 intron crol - chr2L_13_11805001 chr2L_11805001 EF39_1-HE 391 chr2L 11841322 11841371 chr2L 11841445 11841504 10 125 1.5 0.0 0.8 5.6 182 chr2L 11841322 intron Pde1c - chr2L 11841413 intron Pde1c - chr2L 11841504 intron Pde1c - chr2L_10_11840001 chr2L_11840001 EF39_1-HE 392 chr2L 11895867 11895902 chr2L 11895971 11896006 8 104 1.5 8.5 5.0 1.3 139 chr2L 11895867 intron Pde1c - chr2L 11895936 intron Pde1c - chr2L 11896006 intron Pde1c - chr2L_8_11895001 chr2L_11895001 EF39_1-HE 393 chr2L 11934010 11934061 chr2L 11934639 11934690 6 629 2.5 3.0 2.8 1.6 680 chr2L 11934010 intergenic Or33a + chr2L 11934350 intergenic Or33a + chr2L 11934690 exon Or33a + chr2L_6_11930001 chr2L_11930001 EF39_1-HE 394 chr2L 11948556 11948610 chr2L 11948767 11948821 16 211 2.0 3.0 2.5 4.6 265 chr2L 11948556 3` UTR CG16964 + chr2L 11948688 3` UTR CG16964 + chr2L 11948821 intergenic CG16964 + chr2L_16_11945001 chr2L_11945001 EF39_1-HE 395 chr2L 11951944 11951988 chr2L 11952058 11952102 9 114 0.5 3.0 1.8 3.2 158 chr2L 11951944 intergenic CR43314 - chr2L 11952023 intergenic CR43314 - chr2L 11952102 intergenic CR43314 - chr2L_9_11950001 chr2L_11950001 EF39_1-HE 396 chr2L 12020121 12020154 chr2L 12020488 12020521 8 367 2.0 1.5 1.8 2.9 400 chr2L 12020121 exon CG6734 - chr2L 12020321 exon CG6734 - chr2L 12020521 exon CG6734 - chr2L_8_12020001 chr2L_12020001 EF39_1-HE 397 chr2L 12038429 12038556 chr2L 12038533 12038663 14 107 0.0 0.0 0.0 14.0 234 chr2L 12038429 5` UTR Tom70 - chr2L 12038546 intergenic Tom70 -,CG6766 - chr2L 12038663 3` UTR CG6766 - chr2L_14_12035001 chr2L_12035001 EF39_1-HE 398 chr2L 12067302 12067330 chr2L 12074380 12074408 297 6 7078 3.0 5.5 4.2 1.2 7106 chr2L 12067302 intergenic not near genes chr2L 12070855 intergenic not near genes chr2L 12074408 intergenic not near genes chr2L_6_12070001 chr2L_12070001 EF39_1-HE 399 chr2L 12120086 12120124 chr2L 12120189 12120226 13 103 3.0 4.0 3.5 2.9 140 chr2L 12120086 intron CG17211 + chr2L 12120156 intron CG17211 + chr2L 12120226 intron CG17211 + chr2L_13_12120001 chr2L_12120001 EF39_1-HE 400 chr2L 12132724 12132739 chr2L 12132836 12132851 4 111 0.0 6.5 3.2 1.0 127 chr2L 12132724 intron rho-6 - chr2L 12132788 intron rho-6 - chr2L 12132851 intron rho-6 - chr2L_4_12130001 chr2L_12130001 EF39_1-HE 401 chr2L 12148879 12148919 chr2L 12148986 12149026 8 107 4.5 0.0 2.2 2.5 147 chr2L 12148879 intron CG31760 + chr2L 12148952 intron CG31760 + chr2L 12149026 intron CG31760 + chr2L_8_12145001 chr2L_12145001 EF39_1-HE 402 chr2L 12169603 12169628 chr2L 12169740 12169765 4 137 5.5 7.5 6.5 0.5 162 chr2L 12169603 3` UTR CG31760 + chr2L 12169684 3` UTR CG31760 + chr2L 12169765 3` UTR CG31760 + chr2L_4_12165001 chr2L_12165001 EF39_1-HE 403 chr2L 12187517 12187524 chr2L 12187662 12187669 5 145 5.5 0.0 2.8 1.3 152 chr2L 12187517 intron aret + chr2L 12187593 intron aret + chr2L 12187669 intron aret + chr2L_5_12185001 chr2L_12185001 EF39_1-HE 404 chr2L 12191346 12191376 chr2L 12191453 12191482 11 107 4.5 4.5 4.5 2.0 136 chr2L 12191346 intron aret + chr2L 12191414 intron aret + chr2L 12191482 intron aret + chr2L_11_12190001 chr2L_12190001 EF39_1-HE 405 chr2L 12243220 12243278 chr2L 12243336 12243394 11 116 1.5 4.5 3.0 2.8 174 chr2L 12243220 intron aret + chr2L 12243307 intron aret + chr2L 12243394 intron aret + chr2L_11_12240001 chr2L_12240001 EF39_1-HE 406 chr2L 12264634 12264647 chr2L 12264751 12264764 4 117 0.0 8.0 4.0 0.8 130 chr2L 12264634 intron aret + chr2L 12264699 intron aret + chr2L 12264764 intron aret + chr2L_4_12260001 chr2L_12260001 EF39_1-HE 407 chr2L 12264650 12264656 chr2L 12264731 12264771 4 102 0.0 5.5 2.8 1.1 121 chr2L 12264650 intron aret + chr2L 12264710 intron aret + chr2L 12264771 intron aret + chr2L_4_12260001 chr2L_12260001 EF39_1-HE 408 chr2L 12269388 12269401 chr2L 12269492 12269505 4 104 5.0 5.5 5.2 0.6 117 chr2L 12269388 intron aret + chr2L 12269446 intron aret + chr2L 12269505 intron aret + chr2L_4_12265001 chr2L_12265001 EF39_1-HE 409 chr2L 12272134 12272195 chr2L 12272238 12272297 11 103 4.0 5.0 4.5 2.0 163 chr2L 12272134 intron aret + chr2L 12272216 intron aret + chr2L 12272297 intron aret + chr2L_11_12270001 chr2L_12270001 EF39_1-HE 410 chr2L 12302675 12302733 chr2L 12302806 12302864 27 131 5.0 4.0 4.5 4.9 189 chr2L 12302675 intron aret + chr2L 12302770 intron aret + chr2L 12302864 intron aret + chr2L_27_12300001 chr2L_12300001 EF39_1-HE 411 chr2L 12308625 12308678 chr2L 12308738 12308794 14 114 8.0 0.5 4.2 2.7 169 chr2L 12308625 intron aret + chr2L 12308710 intron aret + chr2L 12308794 intron aret + chr2L_14_12305001 chr2L_12305001 EF39_1-HE 412 chr2L 12341322 12341373 chr2L 12341426 12341477 6 104 1.5 1.5 1.5 2.4 155 chr2L 12341322 intergenic not near genes chr2L 12341400 intergenic not near genes chr2L 12341477 intergenic not near genes chr2L_6_12340001 chr2L_12340001 EF39_1-HE 413 chr2L 12366846 12366881 chr2L 12366958 12366993 7 112 2.0 3.0 2.5 2.0 147 chr2L 12366846 intron bru-2 + chr2L 12366920 intron bru-2 + chr2L 12366993 intron bru-2 + chr2L_7_12365001 chr2L_12365001 EF39_1-HE 414 chr2L 12398645 12398660 chr2L 12398760 12398775 11 115 19.0 15.5 17.2 0.6 130 chr2L 12398645 exon Pkd2 + chr2L 12398710 exon Pkd2 + chr2L 12398775 exon Pkd2 + chr2L_11_12395001 chr2L_12395001 EF39_1-HE 415 chr2L 12398664 12398669 chr2L 12398750 12398784 5 109 15.5 12.5 14.0 0.3 120 chr2L 12398664 exon Pkd2 + chr2L 12398724 exon Pkd2 + chr2L 12398784 exon Pkd2 + chr2L_5_12395001 chr2L_12395001 EF39_1-HE 416 chr2L 12471112 12471127 chr2L 12471215 12471230 6 103 6.0 5.5 5.8 0.9 118 chr2L 12471112 intron bun - chr2L 12471171 intron bun - chr2L 12471230 intron bun - chr2L_6_12470001 chr2L_12470001 EF39_1-HE 417 chr2L 12487869 12487916 chr2L 12487976 12488023 9 107 4.5 5.0 4.8 1.6 154 chr2L 12487869 intron bun - chr2L 12487946 intron bun - chr2L 12488023 intron bun - chr2L_9_12485001 chr2L_12485001 EF39_1-HE 418 chr2L 12495113 12495130 chr2L 12495230 12495247 4 117 8.5 0.5 4.5 0.7 134 chr2L 12495113 intron bun - chr2L 12495180 intron bun - chr2L 12495247 intron bun - chr2L_4_12495001 chr2L_12495001 EF39_1-HE 419 chr2L 12506522 12506542 chr2L 12506625 12506645 4 103 3.0 5.0 4.0 0.8 123 chr2L 12506522 intron bun - chr2L 12506584 intron bun - chr2L 12506645 intron bun - chr2L_4_12505001 chr2L_12505001 EF39_1-HE 420 chr2L 12507257 12507263 chr2L 12507372 12507378 5 115 3.5 0.0 1.8 1.8 121 chr2L 12507257 intron bun - chr2L 12507318 intron bun - chr2L 12507378 intron bun - chr2L_5_12505001 chr2L_12505001 EF39_1-HE 421 chr2L 12516112 12516154 chr2L 12516214 12516256 12 102 3.0 0.0 1.5 4.8 144 chr2L 12516112 intron bun - chr2L 12516184 intron bun - chr2L 12516256 intron bun - chr2L_12_12515001 chr2L_12515001 EF39_1-HE 422 chr2L 12523297 12523332 chr2L 12523400 12523435 12 103 10.0 9.0 9.5 1.1 138 chr2L 12523297 intron bun - chr2L 12523366 intron bun - chr2L 12523435 intron bun - chr2L_12_12520001 chr2L_12520001 EF39_1-HE 423 chr2L 12528955 12528999 chr2L 12529238 12529282 5 283 3.0 2.0 2.5 1.4 327 chr2L 12528955 intron bun - chr2L 12529118 intron bun - chr2L 12529282 intron bun - chr2L_5_12525001 chr2L_12525001 EF39_1-HE 424 chr2L 12551008 12551053 chr2L 12551110 12551155 19 102 6.0 4.5 5.2 3.1 147 chr2L 12551008 intergenic not near genes chr2L 12551082 intergenic not near genes chr2L 12551155 intergenic not near genes chr2L_19_12550001 chr2L_12550001 EF39_1-HE 425 chr2L 12558306 12558348 chr2L 12565461 12565503 HMS-Beagle 13 7155 2.5 3.5 3.0 3.2 7197 chr2L 12558306 intergenic not near genes chr2L 12561904 intergenic not near genes chr2L 12565503 intergenic not near genes chr2L_13_12560001 chr2L_12560001 EF39_1-HE 426 chr2L 12601483 12601518 chr2L 12601584 12601620 8 102 2.0 2.5 2.2 2.5 137 chr2L 12601483 intron nub + chr2L 12601552 intron nub + chr2L 12601620 intron nub + chr2L_8_12600001 chr2L_12600001 EF39_1-HE 427 chr2L 12638766 12638808 chr2L 12638896 12638938 14 130 2.0 1.5 1.8 5.0 172 chr2L 12638766 intron Ref2 - chr2L 12638852 intron Ref2 - chr2L 12638938 intron Ref2 - chr2L_14_12635001 chr2L_12635001 EF39_1-HE 428 chr2L 12653006 12653061 chr2L 12653109 12653164 33 103 10.0 11.0 10.5 2.9 158 chr2L 12653006 intergenic not near genes chr2L 12653085 intergenic not near genes chr2L 12653164 intergenic not near genes chr2L_33_12650001 chr2L_12650001 EF39_1-HE 429 chr2L 12656840 12656892 chr2L 12656952 12656998 24 112 4.0 3.5 3.8 5.0 158 chr2L 12656840 intergenic pdm2 + chr2L 12656919 intergenic pdm2 + chr2L 12656998 intergenic pdm2 + chr2L_24_12655001 chr2L_12655001 EF39_1-HE 430 chr2L 12670710 12670749 chr2L 12670804 12670851 10 101 5.0 5.5 5.2 1.6 141 chr2L 12670710 intron pdm2 + chr2L 12670780 intron pdm2 + chr2L 12670851 intron pdm2 + chr2L_10_12670001 chr2L_12670001 EF39_1-HE 431 chr2L 12728893 12728949 chr2L 12729162 12729218 pogo 18 268 2.0 8.0 5.0 3.0 325 chr2L 12728893 intron MRP + chr2L 12729056 intron MRP + chr2L 12729218 exon MRP + chr2L_18_12725001 chr2L_12725001 EF39_1-HE 432 chr2L 12731030 12731084 chr2L 12735823 12735877 F-element 12 4793 3.0 3.5 3.2 2.9 4847 chr2L 12731030 intron MRP + chr2L 12733454 intron MRP + chr2L 12735877 intron MRP + chr2L_12_12730001 chr2L_12730001 EF39_1-HE 433 chr2L 12739159 12739189 chr2L 12743966 12743996 Doc 10 4807 2.5 3.5 3.0 2.5 4837 chr2L 12739159 exon MRP + chr2L 12741578 intron MRP + chr2L 12743996 exon MRP + chr2L_10_12740001 chr2L_12740001 EF39_1-HE 434 chr2L 12763803 12763815 chr2L 12764041 12764053 BS 4 238 5.5 0.0 2.8 1.1 250 chr2L 12763803 intergenic not near genes chr2L 12763928 intergenic not near genes chr2L 12764053 intergenic not near genes chr2L_4_12760001 chr2L_12760001 EF39_1-HE 435 chr2L 12781778 12781783 chr2L 12789254 12789259 Quasimodo 4 7475 35.0 17.0 26.0 0.1 7481 chr2L 12781778 intergenic not near genes chr2L 12785518 intergenic not near genes chr2L 12789259 intergenic not near genes chr2L_4_12785001 chr2L_12785001 EF39_1-HE 436 chr2L 12781785 12781810 chr2L 12789252 12789286 Quasimodo 13 7475 24.5 16.5 20.5 0.6 7501 chr2L 12781785 intergenic not near genes chr2L 12785536 intergenic not near genes chr2L 12789286 intergenic not near genes chr2L_13_12785001 chr2L_12785001 EF39_1-HE 437 chr2L 12791582 12791631 chr2L 12795283 12795307 F-element 27 3699 13.5 9.0 11.2 2.2 3725 chr2L 12791582 intergenic not near genes chr2L 12793444 intergenic not near genes chr2L 12795307 intergenic not near genes chr2L_27_12790001 chr2L_12790001 EF39_1-HE 438 chr2L 12861687 12861718 chr2L 12863180 12863211 hobo 9 1493 6.5 3.5 5.0 1.5 1524 chr2L 12861687 intergenic not near genes chr2L 12862449 intergenic not near genes chr2L 12863211 intergenic not near genes chr2L_9_12860001 chr2L_12860001 EF39_1-HE 439 chr2L 12891484 12891536 chr2L 12891611 12891662 20 126 9.5 4.5 7.0 2.5 178 chr2L 12891484 intergenic not near genes chr2L 12891573 intergenic not near genes chr2L 12891662 intergenic not near genes chr2L_20_12890001 chr2L_12890001 EF39_1-HE 440 chr2L 12894004 12894048 chr2L 12895497 12895522 hobo 18 1490 5.5 5.0 5.2 2.9 1518 chr2L 12894004 intergenic not near genes chr2L 12894763 intergenic not near genes chr2L 12895522 intergenic not near genes chr2L_18_12890001 chr2L_12890001 EF39_1-HE 441 chr2L 12933826 12933880 chr2L 12941319 12941373 blood 24 7492 4.0 5.0 4.5 4.4 7547 chr2L 12933826 intergenic not near genes chr2L 12937600 intergenic not near genes chr2L 12941373 intergenic not near genes chr2L_24_12935001 chr2L_12935001 EF39_1-HE 442 chr2L 12994491 12994512 chr2L 12994596 12994617 8 105 2.0 1.5 1.8 2.9 126 chr2L 12994491 intron CG12404 - chr2L 12994554 intron CG12404 - chr2L 12994617 intron CG12404 - chr2L_8_12990001 chr2L_12990001 EF39_1-HE 443 chr2L 13033812 13033866 chr2L 13033926 13033980 11 114 0.5 4.5 2.5 3.1 168 chr2L 13033812 intron CG9932 - chr2L 13033896 intron CG9932 - chr2L 13033980 intron CG9932 - chr2L_11_13030001 chr2L_13030001 EF39_1-HE 444 chr2L 13036224 13036259 chr2L 13036492 13036527 X-element 5 268 4.0 0.0 2.0 1.7 303 chr2L 13036224 intron CG9932 - chr2L 13036376 intron CG9932 - chr2L 13036527 intron CG9932 - chr2L_5_13035001 chr2L_13035001 EF39_1-HE 445 chr2L 13051969 13051985 chr2L 13052570 13052586 4 601 6.0 7.5 6.8 0.5 617 chr2L 13051969 intron CG9932 - chr2L 13052278 intron CG9932 - chr2L 13052586 intron CG9932 - chr2L_4_13050001 chr2L_13050001 EF39_1-HE 446 chr2L 13106106 13106132 chr2L 13106208 13106234 18 102 8.0 7.5 7.8 2.0 128 chr2L 13106106 intergenic not near genes chr2L 13106170 intergenic not near genes chr2L 13106234 intergenic not near genes chr2L_18_13105001 chr2L_13105001 EF39_1-HE 447 chr2L 13125000 13125031 chr2L 13125130 13125166 7 133 5.0 4.0 4.5 1.3 166 chr2L 13125000 intergenic not near genes chr2L 13125083 intergenic not near genes chr2L 13125166 intergenic not near genes chr2L_7_13125001 chr2L_13125001 EF39_1-HE 448 chr2L 13149940 13149986 chr2L 13150183 13150225 16 242 3.5 4.5 4.0 3.2 285 chr2L 13149940 intergenic not near genes chr2L 13150082 intergenic not near genes chr2L 13150225 intergenic not near genes chr2L_16_13150001 chr2L_13150001 EF39_1-HE 449 chr2L 13152240 13152295 chr2L 13152350 13152405 10 110 3.0 6.5 4.8 1.7 165 chr2L 13152240 intergenic not near genes chr2L 13152322 intergenic not near genes chr2L 13152405 intergenic not near genes chr2L_10_13150001 chr2L_13150001 EF39_1-HE 450 chr2L 13156445 13156451 chr2L 13156580 13156586 4 135 4.0 2.5 3.2 1.0 141 chr2L 13156445 intergenic not near genes chr2L 13156516 intergenic not near genes chr2L 13156586 intergenic not near genes chr2L_4_13155001 chr2L_13155001 EF39_1-HE 451 chr2L 13255268 13255297 chr2L 13255437 13255466 9 169 0.0 4.5 2.2 2.8 198 chr2L 13255268 intron CG31728 + chr2L 13255367 intron CG31728 + chr2L 13255466 exon CG31728 + chr2L_9_13255001 chr2L_13255001 EF39_1-HE 452 chr2L 13266357 13266410 chr2L 13266471 13266524 18 114 1.5 5.5 3.5 4.0 167 chr2L 13266357 intron CG44085 + chr2L 13266440 intron CG44085 + chr2L 13266524 intron CG44085 + chr2L_18_13265001 chr2L_13265001 EF39_1-HE 453 chr2L 13314798 13314849 chr2L 13314902 13314953 23 104 7.0 4.5 5.8 3.4 155 chr2L 13314798 intron CG43778 - chr2L 13314876 intron CG43778 - chr2L 13314953 intron CG43778 - chr2L_23_13310001 chr2L_13310001 EF39_1-HE 454 chr2L 13405628 13405677 chr2L 13410451 13410500 Doc 14 4822 1.0 3.5 2.2 4.4 4872 chr2L 13405628 exon CG7110 + chr2L 13408064 intron CG7110 + chr2L 13410500 intron CG7110 + chr2L_14_13405001 chr2L_13405001 EF39_1-HE 455 chr2L 13412304 13412343 chr2L 13412457 13412496 4 153 2.5 2.0 2.2 1.2 192 chr2L 13412304 intergenic CG16848 + chr2L 13412400 intergenic CG16848 + chr2L 13412496 intergenic CG16848 + chr2L_4_13410001 chr2L_13410001 EF39_1-HE 456 chr2L 13449447 13449492 chr2L 13456909 13456954 Quasimodo 10 7462 2.0 3.5 2.8 2.6 7507 chr2L 13449447 intron,5` UTR CG42784 +,Hsp60D - chr2L 13453200 intron CG42784 + chr2L 13456954 intron CG42784 + chr2L_10_13450001 chr2L_13450001 EF39_1-HE 457 chr2L 13481431 13481468 chr2L 13482064 13482101 jockey 19 633 12.5 14.5 13.5 1.3 670 chr2L 13481431 intron CG42784 + chr2L 13481766 intron CG42784 + chr2L 13482101 intron CG42784 + chr2L_19_13480001 chr2L_13480001 EF39_1-HE 458 chr2L 13498703 13498756 chr2L 13498818 13498870 17 111 3.5 5.0 4.2 3.3 167 chr2L 13498703 exon CG42784 + chr2L 13498786 exon CG42784 + chr2L 13498870 exon CG42784 + chr2L_17_13495001 chr2L_13495001 EF39_1-HE 459 chr2L 13522261 13522283 chr2L 13527593 13527613 Transpac 4 5332 1.0 3.5 2.2 1.2 5352 chr2L 13522261 intron B4 - chr2L 13524937 intron B4 - chr2L 13527613 intron B4 - chr2L_4_13520001 chr2L_13520001 EF39_1-HE 460 chr2L 13556605 13556608 chr2L 13556712 13556715 4 107 0.0 0.0 0.0 4.0 110 chr2L 13556605 intron kuz + chr2L 13556660 intron kuz + chr2L 13556715 intron kuz + chr2L_4_13555001 chr2L_13555001 EF39_1-HE 461 chr2L 13560389 13560419 chr2L 13565236 13565266 F-element 6 4847 2.5 2.5 2.5 1.7 4877 chr2L 13560389 intron kuz + chr2L 13562828 intron kuz + chr2L 13565266 intron kuz + chr2L_6_13560001 chr2L_13560001 EF39_1-HE 462 chr2L 13587892 13587920 chr2L 13588016 13588044 7 124 3.0 3.5 3.2 1.7 152 chr2L 13587892 intron kuz + chr2L 13587968 intron kuz + chr2L 13588044 intron kuz + chr2L_7_13585001 chr2L_13585001 EF39_1-HE 463 chr2L 13614407 13614443 chr2L 13614513 13614549 8 105 1.5 1.5 1.5 3.2 142 chr2L 13614407 intron kuz + chr2L 13614478 intron kuz + chr2L 13614549 intron kuz + chr2L_8_13610001 chr2L_13610001 EF39_1-HE 464 chr2L 13622124 13622147 chr2L 13622249 13622272 5 125 1.0 0.0 0.5 3.3 148 chr2L 13622124 intron kuz + chr2L 13622198 intron kuz + chr2L 13622272 intron kuz + chr2L_5_13620001 chr2L_13620001 EF39_1-HE 465 chr2L 13692984 13693038 chr2L 13693086 13693140 10 102 4.0 4.0 4.0 2.0 156 chr2L 13692984 intron CG31814 - chr2L 13693062 intron CG31814 - chr2L 13693140 intron CG31814 - chr2L_10_13690001 chr2L_13690001 EF39_1-HE 466 chr2L 13696662 13696716 chr2L 13696774 13696828 9 109 3.5 2.0 2.8 2.4 166 chr2L 13696662 intron CG31814 - chr2L 13696745 intron CG31814 - chr2L 13696828 intron CG31814 - chr2L_9_13695001 chr2L_13695001 EF39_1-HE 467 chr2L 13699530 13699583 chr2L 13699633 13699682 13 103 6.0 4.5 5.2 2.1 152 chr2L 13699530 intron CG31814 - chr2L 13699606 intron CG31814 - chr2L 13699682 intron CG31814 - chr2L_13_13695001 chr2L_13695001 EF39_1-HE 468 chr2L 13713294 13713321 chr2L 13713932 13713959 7 638 1.5 7.5 4.5 1.3 665 chr2L 13713294 intron CG31814 - chr2L 13713626 intron CG31814 - chr2L 13713959 intron CG31814 - chr2L_7_13710001 chr2L_13710001 EF39_1-HE 469 chr2L 13733748 13733785 chr2L 13733892 13733929 6 144 4.5 3.5 4.0 1.2 181 chr2L 13733748 intergenic not near genes chr2L 13733838 intergenic not near genes chr2L 13733929 intergenic not near genes chr2L_6_13730001 chr2L_13730001 EF39_1-HE 470 chr2L 13749187 13749211 chr2L 13749295 13749320 4 109 0.0 0.0 0.0 4.0 133 chr2L 13749187 intron,intron CR44846 +,TM9SF4 + chr2L 13749254 intron,intron CR44846 +,TM9SF4 + chr2L 13749320 intron,intron CR44846 +,TM9SF4 + chr2L_4_13745001 chr2L_13745001 EF39_1-HE 471 chr2L 13761787 13761806 chr2L 13762924 13762943 Doc 11 1137 6.5 5.0 5.8 1.6 1156 chr2L 13761787 intron TM9SF4 + chr2L 13762365 intron TM9SF4 + chr2L 13762943 intron TM9SF4 + chr2L_11_13760001 chr2L_13760001 EF39_1-HE 472 chr2L 13794679 13794726 chr2L 13794805 13794852 9 126 1.5 4.0 2.8 2.4 173 chr2L 13794679 intron Sec71 + chr2L 13794766 intron Sec71 + chr2L 13794852 intron Sec71 + chr2L_9_13790001 chr2L_13790001 EF39_1-HE 473 chr2L 13800167 13800203 chr2L 13800297 13800333 5 130 2.0 5.5 3.8 1.0 166 chr2L 13800167 intergenic Sec71 + chr2L 13800250 intergenic not near genes chr2L 13800333 intergenic not near genes chr2L_5_13800001 chr2L_13800001 EF39_1-HE 474 chr2L 13803031 13803081 chr2L 13803141 13803189 9 109 1.5 3.0 2.2 2.8 158 chr2L 13803031 intergenic not near genes chr2L 13803110 intergenic not near genes chr2L 13803189 intergenic CAH1 + chr2L_9_13800001 chr2L_13800001 EF39_1-HE 475 chr2L 13853063 13853106 chr2L 13862239 13862282 roo 8 9176 5.5 4.0 4.8 1.4 9219 chr2L 13853063 intron CenG1A + chr2L 13857672 intron CenG1A + chr2L 13862282 intron CenG1A + chr2L_8_13855001 chr2L_13855001 EF39_1-HE 476 chr2L 13876818 13876832 chr2L 13876935 13876949 5 117 5.0 2.5 3.8 1.0 131 chr2L 13876818 intron CenG1A + chr2L 13876884 intron CenG1A + chr2L 13876949 intron CenG1A + chr2L_5_13875001 chr2L_13875001 EF39_1-HE 477 chr2L 13917711 13917759 chr2L 13917838 13917886 14 127 3.0 4.0 3.5 3.1 175 chr2L 13917711 intron Ance-3 + chr2L 13917798 intron Ance-3 + chr2L 13917886 intron Ance-3 + chr2L_14_13915001 chr2L_13915001 EF39_1-HE 478 chr2L 13935168 13935178 chr2L 13935282 13935292 4 114 1.5 0.0 0.8 2.2 124 chr2L 13935168 intron Ance-3 + chr2L 13935230 intron Ance-3 + chr2L 13935292 intron Ance-3 + chr2L_4_13935001 chr2L_13935001 EF39_1-HE 479 chr2L 13954961 13954995 chr2L 13955067 13955109 4 112 6.0 0.0 3.0 1.0 148 chr2L 13954961 intron Ance-3 + chr2L 13955035 intron Ance-3 + chr2L 13955109 intron Ance-3 + chr2L_4_13955001 chr2L_13955001 EF39_1-HE 480 chr2L 13988254 13988280 chr2L 13988367 13988393 5 113 6.5 2.0 4.2 1.0 139 chr2L 13988254 intron rk - chr2L 13988324 intron rk - chr2L 13988393 intron rk - chr2L_5_13985001 chr2L_13985001 EF39_1-HE 481 chr2L 14012131 14012181 chr2L 14012281 14012331 33 149 3.0 4.5 3.8 6.9 200 chr2L 14012131 intergenic not near genes chr2L 14012231 intergenic not near genes chr2L 14012331 intergenic not near genes chr2L_33_14010001 chr2L_14010001 EF39_1-HE 482 chr2L 14063842 14063847 chr2L 14063979 14063984 5 137 0.5 5.5 3.0 1.2 142 chr2L 14063842 intron nAChRalpha5 + chr2L 14063913 intron nAChRalpha5 + chr2L 14063984 intron nAChRalpha5 + chr2L_5_14060001 chr2L_14060001 EF39_1-HE 483 chr2L 14086666 14086707 chr2L 14086760 14086813 22 109 0.5 8.0 4.2 4.2 147 chr2L 14086666 intron nAChRalpha5 + chr2L 14086740 intron nAChRalpha5 + chr2L 14086813 intron nAChRalpha5 + chr2L_22_14085001 chr2L_14085001 EF39_1-HE 484 chr2L 14127186 14127236 chr2L 14127298 14127348 22 112 7.0 6.0 6.5 2.9 162 chr2L 14127186 intergenic not near genes chr2L 14127267 intergenic not near genes chr2L 14127348 intergenic not near genes chr2L_22_14125001 chr2L_14125001 EF39_1-HE 485 chr2L 14135209 14135265 chr2L 14135316 14135372 16 107 2.0 0.0 1.0 8.0 163 chr2L 14135209 intron CG17341 + chr2L 14135290 intron CG17341 + chr2L 14135372 intron CG17341 + chr2L_16_14135001 chr2L_14135001 EF39_1-HE 486 chr2L 14160659 14160717 chr2L 14160771 14160829 8 112 4.0 2.5 3.2 1.9 170 chr2L 14160659 intergenic CG17341 +,CG43332 - chr2L 14160744 intergenic CG17341 +,CG43332 - chr2L 14160829 intergenic CG17341 +,CG43332 - chr2L_8_14160001 chr2L_14160001 EF39_1-HE 487 chr2L 14162129 14162140 chr2L 14162257 14162268 4 128 6.0 21.0 13.5 0.3 139 chr2L 14162129 exon CG43332 - chr2L 14162198 exon CG43332 - chr2L 14162268 exon CG43332 - chr2L_4_14160001 chr2L_14160001 EF39_1-HE 488 chr2L 14278513 14278560 chr2L 14278622 14278668 17 108 3.5 1.5 2.5 4.9 155 chr2L 14278513 exon wb + chr2L 14278590 intron wb + chr2L 14278668 intron wb + chr2L_17_14275001 chr2L_14275001 EF39_1-HE 489 chr2L 14301734 14301746 chr2L 14301844 14301856 5 110 6.0 0.0 3.0 1.2 122 chr2L 14301734 intron wb + chr2L 14301795 intron wb + chr2L 14301856 intron wb + chr2L_5_14300001 chr2L_14300001 EF39_1-HE 490 chr2L 14367840 14367873 chr2L 14367946 14367979 4 106 9.0 2.0 5.5 0.6 139 chr2L 14367840 intergenic not near genes chr2L 14367910 intergenic not near genes chr2L 14367979 intergenic not near genes chr2L_4_14365001 chr2L_14365001 EF39_1-HE 491 chr2L 14440841 14440880 chr2L 14440956 14440995 7 115 5.5 2.5 4.0 1.4 154 chr2L 14440841 intergenic not near genes chr2L 14440918 intergenic not near genes chr2L 14440995 intergenic not near genes chr2L_7_14440001 chr2L_14440001 EF39_1-HE 492 chr2L 14455043 14455092 chr2L 14455379 14455411 4 328 0.0 5.0 2.5 1.1 368 chr2L 14455043 intergenic not near genes chr2L 14455227 intergenic not near genes chr2L 14455411 intergenic not near genes chr2L_4_14455001 chr2L_14455001 EF39_1-HE 493 chr2L 14465380 14465438 chr2L 14465549 14465607 10 169 2.5 0.0 1.2 4.5 227 chr2L 14465380 intergenic not near genes chr2L 14465494 intergenic not near genes chr2L 14465607 intergenic not near genes chr2L_10_14465001 chr2L_14465001 EF39_1-HE 494 chr2L 14465574 14465613 chr2L 14469063 14469102 hopper2 8 3489 0.0 4.5 2.2 2.5 3528 chr2L 14465574 intergenic not near genes chr2L 14467338 intergenic not near genes chr2L 14469102 intergenic not near genes chr2L_8_14465001 chr2L_14465001 EF39_1-HE 495 chr2L 14588360 14588417 chr2L 14588540 14588597 9 180 2.0 3.5 2.8 2.4 237 chr2L 14588360 intergenic CG42680 - chr2L 14588478 intergenic CG42680 - chr2L 14588597 intergenic CG42680 - chr2L_9_14585001 chr2L_14585001 EF39_1-HE 496 chr2L 14593075 14593084 chr2L 14593178 14593187 5 103 4.0 1.0 2.5 1.4 112 chr2L 14593075 intergenic not near genes chr2L 14593131 intergenic not near genes chr2L 14593187 intergenic not near genes chr2L_5_14590001 chr2L_14590001 EF39_1-HE 497 chr2L 14659575 14659624 chr2L 14659684 14659733 16 109 2.5 2.0 2.2 5.0 158 chr2L 14659575 intron osp - chr2L 14659654 intron osp - chr2L 14659733 intron osp - chr2L_16_14655001 chr2L_14655001 EF39_1-HE 498 chr2L 14660606 14660649 chr2L 14660879 14660922 17 273 6.5 6.0 6.2 2.4 316 chr2L 14660606 intron osp - chr2L 14660764 intron osp - chr2L 14660922 intron osp - chr2L_17_14660001 chr2L_14660001 EF39_1-HE 499 chr2L 14677073 14677094 chr2L 14677279 14677300 5 206 7.0 5.0 6.0 0.7 227 chr2L 14677073 intron osp - chr2L 14677186 intron osp - chr2L 14677300 intron osp - chr2L_5_14675001 chr2L_14675001 EF39_1-HE 500 chr2L 14677107 14677119 chr2L 14677273 14677325 7 200 4.0 4.5 4.2 1.3 218 chr2L 14677107 intron osp - chr2L 14677216 intron osp - chr2L 14677325 intron osp - chr2L_7_14675001 chr2L_14675001 EF39_1-HE 501 chr2L 14707181 14707238 chr2L 14707327 14707383 4 146 1.5 0.0 0.8 2.2 202 chr2L 14707181 intergenic not near genes chr2L 14707282 intergenic not near genes chr2L 14707383 intergenic not near genes chr2L_4_14705001 chr2L_14705001 EF39_1-HE 502 chr2L 14716573 14716621 chr2L 14716682 14716730 12 109 2.5 3.5 3.0 3.0 157 chr2L 14716573 intergenic not near genes chr2L 14716652 intergenic not near genes chr2L 14716730 intergenic not near genes chr2L_12_14715001 chr2L_14715001 EF39_1-HE 503 chr2L 14759323 14759367 chr2L 14759437 14759481 13 114 3.0 1.5 2.2 4.1 158 chr2L 14759323 intergenic not near genes chr2L 14759402 intergenic not near genes chr2L 14759481 intergenic not near genes chr2L_13_14755001 chr2L_14755001 EF39_1-HE 504 chr2L 14773881 14773932 chr2L 14774061 14774112 25 180 6.0 11.0 8.5 2.6 231 chr2L 14773881 3` UTR CG4650 - chr2L 14773996 3` UTR CG4650 - chr2L 14774112 3` UTR CG4650 - chr2L_25_14770001 chr2L_14770001 EF39_1-HE 505 chr2L 14803864 14803908 chr2L 14809093 14809137 copia 11 5229 2.5 5.0 3.8 2.3 5273 chr2L 14803864 intergenic not near genes chr2L 14806500 intergenic not near genes chr2L 14809137 intergenic not near genes chr2L_11_14805001 chr2L_14805001 EF39_1-HE 506 chr2L 14814922 14814947 chr2L 14815205 14815230 8 283 3.5 1.5 2.5 2.3 308 chr2L 14814922 intergenic not near genes chr2L 14815076 intergenic not near genes chr2L 14815230 intergenic not near genes chr2L_8_14815001 chr2L_14815001 EF39_1-HE 507 chr2L 14833773 14833820 chr2L 14833903 14833950 15 130 1.5 5.5 3.5 3.3 177 chr2L 14833773 intergenic not near genes chr2L 14833862 intergenic not near genes chr2L 14833950 intergenic not near genes chr2L_15_14830001 chr2L_14830001 EF39_1-HE 508 chr2L 14887673 14887701 chr2L 14887776 14887805 9 104 8.0 3.0 5.5 1.4 132 chr2L 14887673 intergenic not near genes chr2L 14887739 intergenic not near genes chr2L 14887805 intergenic not near genes chr2L_9_14885001 chr2L_14885001 EF39_1-HE 509 chr2L 14889930 14889980 chr2L 14890381 14890423 jockey 22 451 4.0 2.5 3.2 5.2 493 chr2L 14889930 intergenic not near genes chr2L 14890176 intergenic not near genes chr2L 14890423 intergenic not near genes chr2L_22_14890001 chr2L_14890001 EF39_1-HE 510 chr2L 14923077 14923136 chr2L 14923183 14923242 18 106 6.5 3.5 5.0 3.0 165 chr2L 14923077 exon CG42313 - chr2L 14923160 intron CG42313 - chr2L 14923242 intron CG42313 - chr2L_18_14920001 chr2L_14920001 EF39_1-HE 511 chr2L 14933353 14933381 chr2L 14933457 14933485 6 104 2.5 4.0 3.2 1.4 132 chr2L 14933353 intron CG42313 - chr2L 14933419 intron CG42313 - chr2L 14933485 intron CG42313 - chr2L_6_14930001 chr2L_14930001 EF39_1-HE 512 chr2L 14945410 14945462 chr2L 14945532 14945584 13 122 2.0 0.0 1.0 6.5 174 chr2L 14945410 intron CG42313 - chr2L 14945497 intron CG42313 - chr2L 14945584 intron CG42313 - chr2L_13_14945001 chr2L_14945001 EF39_1-HE 513 chr2L 14984361 14984398 chr2L 14991989 14992026 opus 8 7627 4.5 3.0 3.8 1.7 7665 chr2L 14984361 intron mol - chr2L 14988194 intron mol - chr2L 14992026 intron mol - chr2L_8_14985001 chr2L_14985001 EF39_1-HE 514 chr2L 15013134 15013181 chr2L 15013258 15013316 12 132 0.5 4.0 2.2 3.8 182 chr2L 15013134 intergenic CR43856 - chr2L 15013225 intergenic not near genes chr2L 15013316 intergenic not near genes chr2L_12_15010001 chr2L_15010001 EF39_1-HE 515 chr2L 15014604 15014619 chr2L 15014704 15014724 4 101 4.0 5.0 4.5 0.7 120 chr2L 15014604 intergenic not near genes chr2L 15014664 intergenic not near genes chr2L 15014724 intergenic not near genes chr2L_4_15010001 chr2L_15010001 EF39_1-HE 516 chr2L 15021415 15021471 chr2L 15021516 15021573 23 102 6.5 5.5 6.0 3.3 158 chr2L 15021415 intron GABA-B-R1 + chr2L 15021494 intron GABA-B-R1 + chr2L 15021573 intron GABA-B-R1 + chr2L_23_15020001 chr2L_15020001 EF39_1-HE 517 chr2L 15072315 15072324 chr2L 15072433 15072442 4 118 10.0 5.0 7.5 0.5 127 chr2L 15072315 intron vas + chr2L 15072378 exon vas + chr2L 15072442 exon vas + chr2L_4_15070001 chr2L_15070001 EF39_1-HE 518 chr2L 15082633 15082686 chr2L 15082753 15082806 18 120 3.5 0.0 1.8 6.4 173 chr2L 15082633 intron CG15270 + chr2L 15082720 intron CG15270 + chr2L 15082806 intron CG15270 + chr2L_18_15080001 chr2L_15080001 EF39_1-HE 519 chr2L 15083771 15083806 chr2L 15083919 15083954 11 148 2.0 7.5 4.8 1.9 183 chr2L 15083771 intron CG15270 + chr2L 15083862 intron CG15270 + chr2L 15083954 intron CG15270 + chr2L_11_15080001 chr2L_15080001 EF39_1-HE 520 chr2L 15087729 15087771 chr2L 15087865 15087907 15 135 4.0 5.0 4.5 2.7 178 chr2L 15087729 exon CG15270 + chr2L 15087818 intron CG15270 + chr2L 15087907 intron CG15270 + chr2L_15_15085001 chr2L_15085001 EF39_1-HE 521 chr2L 15090002 15090040 chr2L 15090122 15090160 17 119 7.5 5.5 6.5 2.3 158 chr2L 15090002 intron CG15270 + chr2L 15090081 intron CG15270 + chr2L 15090160 intron CG15270 + chr2L_17_15090001 chr2L_15090001 EF39_1-HE 522 chr2L 15090041 15090049 chr2L 15090121 15090167 7 114 4.5 5.5 5.0 1.2 126 chr2L 15090041 intron CG15270 + chr2L 15090104 intron CG15270 + chr2L 15090167 intron CG15270 + chr2L_7_15090001 chr2L_15090001 EF39_1-HE 523 chr2L 15098513 15098540 chr2L 15098622 15098646 9 106 11.5 8.0 9.8 0.8 133 chr2L 15098513 intergenic not near genes chr2L 15098580 intergenic not near genes chr2L 15098646 intergenic not near genes chr2L_9_15095001 chr2L_15095001 EF39_1-HE 524 chr2L 15122756 15122790 chr2L 15122862 15122896 9 106 1.5 2.0 1.8 3.2 140 chr2L 15122756 intergenic not near genes chr2L 15122826 intergenic not near genes chr2L 15122896 intergenic not near genes chr2L_9_15120001 chr2L_15120001 EF39_1-HE 525 chr2L 15138759 15138801 chr2L 15138868 15138914 4 111 0.0 4.5 2.2 1.2 155 chr2L 15138759 intergenic not near genes chr2L 15138836 intergenic not near genes chr2L 15138914 intergenic not near genes chr2L_4_15135001 chr2L_15135001 EF39_1-HE 526 chr2L 15197499 15197508 chr2L 15197621 15197630 INE-1 6 121 0.5 12.0 6.2 0.8 131 chr2L 15197499 intron CG4168 - chr2L 15197564 intron CG4168 - chr2L 15197630 intron CG4168 - chr2L_6_15195001 chr2L_15195001 EF39_1-HE 527 chr2L 15226344 15226390 chr2L 15226446 15226492 8 102 3.0 3.5 3.2 1.9 148 chr2L 15226344 intergenic not near genes chr2L 15226418 intergenic not near genes chr2L 15226492 intergenic not near genes chr2L_8_15225001 chr2L_15225001 EF39_1-HE 528 chr2L 15315051 15315069 chr2L 15315177 15315195 4 126 3.0 3.0 3.0 1.0 144 chr2L 15315051 intergenic not near genes chr2L 15315123 intergenic not near genes chr2L 15315195 intergenic not near genes chr2L_4_15315001 chr2L_15315001 EF39_1-HE 529 chr2L 15343510 15343532 chr2L 15343621 15343643 6 111 4.5 0.5 2.5 1.7 133 chr2L 15343510 intergenic not near genes chr2L 15343576 intergenic not near genes chr2L 15343643 intergenic not near genes chr2L_6_15340001 chr2L_15340001 EF39_1-HE 530 chr2L 15350875 15350932 chr2L 15350985 15351042 15 110 5.5 3.5 4.5 2.7 167 chr2L 15350875 intergenic not near genes chr2L 15350958 intergenic not near genes chr2L 15351042 intergenic not near genes chr2L_15_15350001 chr2L_15350001 EF39_1-HE 531 chr2L 15375790 15375845 chr2L 15375928 15375983 16 138 2.5 2.5 2.5 4.6 193 chr2L 15375790 intergenic not near genes chr2L 15375886 intergenic not near genes chr2L 15375983 intergenic not near genes chr2L_16_15375001 chr2L_15375001 EF39_1-HE 532 chr2L 15385423 15385453 chr2L 15385527 15385557 8 104 8.0 5.5 6.8 1.0 134 chr2L 15385423 intergenic not near genes chr2L 15385490 intergenic not near genes chr2L 15385557 intergenic not near genes chr2L_8_15385001 chr2L_15385001 EF39_1-HE 533 chr2L 15395011 15395045 chr2L 15395128 15395162 14 117 3.0 5.5 4.2 2.7 151 chr2L 15395011 intergenic not near genes chr2L 15395086 intergenic not near genes chr2L 15395162 intergenic not near genes chr2L_14_15395001 chr2L_15395001 EF39_1-HE 534 chr2L 15409266 15409284 chr2L 15409383 15409401 7 117 0.5 3.5 2.0 2.3 135 chr2L 15409266 intergenic not near genes chr2L 15409334 intergenic not near genes chr2L 15409401 intergenic not near genes chr2L_7_15405001 chr2L_15405001 EF39_1-HE 535 chr2L 15427259 15427307 chr2L 15427471 15427519 6 212 3.0 0.0 1.5 2.4 260 chr2L 15427259 intergenic not near genes chr2L 15427389 intergenic not near genes chr2L 15427519 intergenic not near genes chr2L_6_15425001 chr2L_15425001 EF39_1-HE 536 chr2L 15443302 15443356 chr2L 15443412 15443466 17 109 1.0 6.0 3.5 3.8 164 chr2L 15443302 intergenic not near genes chr2L 15443384 intergenic not near genes chr2L 15443466 intergenic not near genes chr2L_17_15440001 chr2L_15440001 EF39_1-HE 537 chr2L 15446025 15446069 chr2L 15453520 15453564 blood 12 7495 3.0 4.5 3.8 2.5 7539 chr2L 15446025 intergenic not near genes chr2L 15449794 intergenic not near genes chr2L 15453564 intergenic not near genes chr2L_12_15445001 chr2L_15445001 EF39_1-HE 538 chr2L 15483263 15483314 chr2L 15483374 15483426 18 112 3.0 3.5 3.2 4.3 163 chr2L 15483263 intergenic not near genes chr2L 15483344 intergenic not near genes chr2L 15483426 intergenic not near genes chr2L_18_15480001 chr2L_15480001 EF39_1-HE 539 chr2L 15533246 15533298 chr2L 15533342 15533400 15 101 4.0 3.0 3.5 3.3 154 chr2L 15533246 intergenic not near genes chr2L 15533323 intergenic not near genes chr2L 15533400 intergenic not near genes chr2L_15_15530001 chr2L_15530001 EF39_1-HE 540 chr2L 15564814 15564847 chr2L 15564920 15564953 6 106 5.0 2.5 3.8 1.2 139 chr2L 15564814 intron kek3 + chr2L 15564884 intron kek3 + chr2L 15564953 intron kek3 + chr2L_6_15560001 chr2L_15560001 EF39_1-HE 541 chr2L 15586391 15586442 chr2L 15593469 15593521 297 6 7079 1.5 0.0 0.8 3.3 7130 chr2L 15586391 intergenic not near genes chr2L 15589956 intergenic not near genes chr2L 15593521 intergenic not near genes chr2L_6_15585001 chr2L_15585001 EF39_1-HE 542 chr2L 15606568 15606619 chr2L 15606683 15606733 16 114 2.0 3.0 2.5 4.6 165 chr2L 15606568 intergenic not near genes chr2L 15606650 intergenic not near genes chr2L 15606733 intergenic not near genes chr2L_16_15605001 chr2L_15605001 EF39_1-HE 543 chr2L 15626341 15626393 chr2L 15626446 15626498 21 103 3.0 4.0 3.5 4.7 157 chr2L 15626341 intergenic not near genes chr2L 15626420 intergenic not near genes chr2L 15626498 intergenic not near genes chr2L_21_15625001 chr2L_15625001 EF39_1-HE 544 chr2L 15732487 15732529 chr2L 15732608 15732650 17 121 6.0 3.5 4.8 2.9 163 chr2L 15732487 intron CycE - chr2L 15732568 intron CycE - chr2L 15732650 intron CycE - chr2L_17_15730001 chr2L_15730001 EF39_1-HE 545 chr2L 15734297 15734318 chr2L 15734402 15734422 4 104 0.5 5.5 3.0 1.0 125 chr2L 15734297 intron CycE - chr2L 15734360 intron CycE - chr2L 15734422 intron CycE - chr2L_4_15730001 chr2L_15730001 EF39_1-HE 546 chr2L 15751418 15751461 chr2L 15751521 15751564 4 103 2.5 3.5 3.0 1.0 146 chr2L 15751418 intergenic snRNA:U5:35D -,l(2)35Di - chr2L 15751491 intergenic snRNA:U5:35D -,l(2)35Di - chr2L 15751564 3` UTR snRNA:U5:35D - chr2L_4_15750001 chr2L_15750001 EF39_1-HE 547 chr2L 15797096 15797143 chr2L 15797394 15797441 14 298 3.5 2.0 2.8 3.7 345 chr2L 15797096 intergenic not near genes chr2L 15797268 intergenic not near genes chr2L 15797441 intergenic not near genes chr2L_14_15795001 chr2L_15795001 EF39_1-HE 548 chr2L 15821058 15821079 chr2L 15821184 15821205 5 126 0.0 1.0 0.5 3.3 147 chr2L 15821058 intergenic not near genes chr2L 15821132 intergenic not near genes chr2L 15821205 intergenic not near genes chr2L_5_15820001 chr2L_15820001 EF39_1-HE 549 chr2L 15824690 15824706 chr2L 15824880 15824896 10 190 10.5 9.0 9.8 0.9 206 chr2L 15824690 intergenic not near genes chr2L 15824793 intergenic not near genes chr2L 15824896 intergenic not near genes chr2L_10_15820001 chr2L_15820001 EF39_1-HE 550 chr2L 15824708 15824739 chr2L 15824877 15824929 16 189 4.5 8.5 6.5 2.1 221 chr2L 15824708 intergenic not near genes chr2L 15824818 intergenic not near genes chr2L 15824929 intergenic not near genes chr2L_16_15820001 chr2L_15820001 EF39_1-HE 551 chr2L 15843283 15843316 chr2L 15845812 15845844 11 2529 23.0 27.0 25.0 0.4 2561 chr2L 15843283 intergenic not near genes chr2L 15844564 intergenic not near genes chr2L 15845844 intergenic not near genes chr2L_11_15840001 chr2L_15840001 EF39_1-HE 552 chr2L 15843204 15843245 chr2L 15845890 15845931 13 2686 29.5 30.0 29.8 0.4 2727 chr2L 15843204 intergenic not near genes chr2L 15844568 intergenic not near genes chr2L 15845931 intergenic not near genes chr2L_13_15840001 chr2L_15840001 EF39_1-HE 553 chr2L 15848480 15848522 chr2L 15848924 15848966 11 444 2.5 2.0 2.2 3.4 486 chr2L 15848480 intergenic not near genes chr2L 15848723 intergenic not near genes chr2L 15848966 intergenic not near genes chr2L_11_15845001 chr2L_15845001 EF39_1-HE 554 chr2L 15906156 15906205 chr2L 15906271 15906320 9 115 3.5 2.0 2.8 2.4 164 chr2L 15906156 intron beat-Ib - chr2L 15906238 intron beat-Ib - chr2L 15906320 exon beat-Ib - chr2L_9_15905001 chr2L_15905001 EF39_1-HE 555 chr2L 15907317 15907369 chr2L 15907698 15907750 6 381 0.5 1.0 0.8 3.3 433 chr2L 15907317 intron beat-Ib - chr2L 15907534 intron beat-Ib - chr2L 15907750 intron beat-Ib - chr2L_6_15905001 chr2L_15905001 EF39_1-HE 556 chr2L 15912102 15912107 chr2L 15912221 15912226 4 119 1.5 6.0 3.8 0.8 124 chr2L 15912102 intron beat-Ib - chr2L 15912164 intron beat-Ib - chr2L 15912226 intron beat-Ib - chr2L_4_15910001 chr2L_15910001 EF39_1-HE 557 chr2L 15935176 15935221 chr2L 15935290 15935337 6 115 0.5 0.0 0.2 5.0 161 chr2L 15935176 intron beat-Ib - chr2L 15935256 intron beat-Ib - chr2L 15935337 intron beat-Ib - chr2L_6_15935001 chr2L_15935001 EF39_1-HE 558 chr2L 15956007 15956044 chr2L 15957500 15957537 hobo 10 1493 9.0 7.5 8.2 1.1 1530 chr2L 15956007 intron beat-Ib - chr2L 15956772 intron beat-Ib - chr2L 15957537 intron beat-Ib - chr2L_10_15955001 chr2L_15955001 EF39_1-HE 559 chr2L 16001447 16001494 chr2L 16001561 16001608 19 112 0.0 6.0 3.0 4.8 161 chr2L 16001447 intron beat-Ic + chr2L 16001528 intron beat-Ic + chr2L 16001608 intron beat-Ic + chr2L_19_16000001 chr2L_16000001 EF39_1-HE 560 chr2L 16008694 16008723 chr2L 16008798 16008827 8 104 4.0 5.0 4.5 1.5 133 chr2L 16008694 intron beat-Ic + chr2L 16008760 intron beat-Ic + chr2L 16008827 intron beat-Ic + chr2L_8_16005001 chr2L_16005001 EF39_1-HE 561 chr2L 16021367 16021405 chr2L 16021495 16021533 9 128 4.0 7.0 5.5 1.4 166 chr2L 16021367 intron beat-Ic + chr2L 16021450 intron beat-Ic + chr2L 16021533 intron beat-Ic + chr2L_9_16020001 chr2L_16020001 EF39_1-HE 562 chr2L 16043561 16043588 chr2L 16043672 16043699 7 111 4.0 3.5 3.8 1.5 138 chr2L 16043561 intron,intron BicC +,CG45084 + chr2L 16043630 intron,intron BicC +,CG45084 + chr2L 16043699 intron,intron BicC +,CG45084 + chr2L_7_16040001 chr2L_16040001 EF39_1-HE 563 chr2L 16058112 16058152 chr2L 16058279 16058319 8 167 2.5 4.5 3.5 1.8 207 chr2L 16058112 intron beat-Ia + chr2L 16058216 intron beat-Ia + chr2L 16058319 intron beat-Ia + chr2L_8_16055001 chr2L_16055001 EF39_1-HE 564 chr2L 16098908 16098950 chr2L 16099022 16099064 7 114 0.5 6.0 3.2 1.7 156 chr2L 16098908 intergenic not near genes chr2L 16098986 intergenic not near genes chr2L 16099064 intergenic not near genes chr2L_7_16095001 chr2L_16095001 EF39_1-HE 565 chr2L 16141122 16141189 chr2L 16146369 16146422 copia 9 5237 0.0 6.0 3.0 2.2 5300 chr2L 16141122 intergenic not near genes chr2L 16143772 intergenic not near genes chr2L 16146422 intergenic not near genes chr2L_9_16140001 chr2L_16140001 EF39_1-HE 566 chr2L 16153717 16153760 chr2L 16160811 16160854 297 18 7093 7.5 5.0 6.2 2.5 7137 chr2L 16153717 intergenic not near genes chr2L 16157286 intergenic not near genes chr2L 16160854 intergenic not near genes chr2L_18_16155001 chr2L_16155001 EF39_1-HE 567 chr2L 16207045 16207088 chr2L 16207148 16207191 8 103 1.5 3.5 2.5 2.3 146 chr2L 16207045 intergenic not near genes chr2L 16207118 intergenic not near genes chr2L 16207191 intergenic not near genes chr2L_8_16205001 chr2L_16205001 EF39_1-HE 568 chr2L 16243319 16243360 chr2L 16243425 16243466 10 106 3.0 3.5 3.2 2.4 147 chr2L 16243319 exon CG42818 + chr2L 16243392 exon CG42818 + chr2L 16243466 exon CG42818 + chr2L_10_16240001 chr2L_16240001 EF39_1-HE 569 chr2L 16243695 16243860 chr2L 16243804 16243969 22 119 4.5 5.0 4.8 3.8 274 chr2L 16243695 exon CG42818 + chr2L 16243832 exon CG42818 + chr2L 16243969 exon CG42818 + chr2L_22_16240001 chr2L_16240001 EF39_1-HE 570 chr2L 16254872 16254914 chr2L 16255157 16255199 9 283 1.0 5.5 3.2 2.1 327 chr2L 16254872 intron PRL-1 - chr2L 16255036 intron PRL-1 - chr2L 16255199 intron PRL-1 - chr2L_9_16255001 chr2L_16255001 EF39_1-HE 571 chr2L 16280246 16280285 chr2L 16281429 16281482 1360 11 1196 3.0 5.0 4.0 2.2 1236 chr2L 16280246 intron crp - chr2L 16280864 intron crp - chr2L 16281482 intron crp - chr2L_11_16280001 chr2L_16280001 EF39_1-HE 572 chr2L 16298704 16298748 chr2L 16298809 16298853 6 97 2.5 6.0 4.2 1.2 149 chr2L 16298704 intron heix - chr2L 16298778 intron heix - chr2L 16298853 intron heix - chr2L_6_16295001 chr2L_16295001 EF39_1-HE 573 chr2L 16354557 16354579 chr2L 16354678 16354679 5 115 6.5 0.0 3.2 1.2 122 chr2L 16354557 intergenic CG4455 +,CaBP1 - chr2L 16354618 intergenic CG4455 +,CaBP1 - chr2L 16354679 intergenic CG4455 +,CaBP1 - chr2L_5_16350001 chr2L_16350001 EF39_1-HE 574 chr2L 16360875 16360912 chr2L 16360979 16361016 9 104 3.5 3.5 3.5 2.0 141 chr2L 16360875 intergenic not near genes chr2L 16360946 intergenic not near genes chr2L 16361016 intergenic not near genes chr2L_9_16360001 chr2L_16360001 EF39_1-HE 575 chr2L 16363917 16363963 chr2L 16364189 16364235 13 272 1.0 2.5 1.8 4.6 318 chr2L 16363917 intergenic not near genes chr2L 16364076 intergenic not near genes chr2L 16364235 intergenic not near genes chr2L_13_16360001 chr2L_16360001 EF39_1-HE 576 chr2L 16386737 16386770 chr2L 16386850 16386887 5 115 7.5 3.0 5.2 0.8 150 chr2L 16386737 intergenic not near genes chr2L 16386812 intergenic not near genes chr2L 16386887 intergenic not near genes chr2L_5_16385001 chr2L_16385001 EF39_1-HE 577 chr2L 16391031 16391041 chr2L 16391139 16391149 6 108 0.0 3.0 1.5 2.4 118 chr2L 16391031 intergenic not near genes chr2L 16391090 intergenic not near genes chr2L 16391149 intergenic not near genes chr2L_6_16390001 chr2L_16390001 EF39_1-HE 578 chr2L 16391042 16391082 chr2L 16391135 16391190 9 106 0.0 3.0 1.5 3.6 148 chr2L 16391042 intergenic not near genes chr2L 16391116 intergenic not near genes chr2L 16391190 intergenic not near genes chr2L_9_16390001 chr2L_16390001 EF39_1-HE 579 chr2L 16391787 16391793 chr2L 16391889 16391895 4 102 3.5 0.0 1.8 1.4 108 chr2L 16391787 intergenic not near genes chr2L 16391841 intergenic not near genes chr2L 16391895 intergenic not near genes chr2L_4_16390001 chr2L_16390001 EF39_1-HE 580 chr2L 16407385 16407420 chr2L 16407541 16407576 6 156 4.0 2.5 3.2 1.4 191 chr2L 16407385 intron CG5888 - chr2L 16407480 intron CG5888 - chr2L 16407576 intron CG5888 - chr2L_6_16405001 chr2L_16405001 EF39_1-HE 581 chr2L 16422585 16422636 chr2L 16422699 16422750 24 114 5.5 12.0 8.8 2.4 165 chr2L 16422585 intron CG5888 - chr2L 16422668 intron CG5888 - chr2L 16422750 intron CG5888 - chr2L_24_16420001 chr2L_16420001 EF39_1-HE 582 chr2L 16458804 16458816 chr2L 16459026 16459038 8 222 2.0 4.0 3.0 2.0 234 chr2L 16458804 intergenic not near genes chr2L 16458921 intergenic not near genes chr2L 16459038 intergenic not near genes chr2L_8_16455001 chr2L_16455001 EF39_1-HE 583 chr2L 16487871 16487923 chr2L 16488007 16488059 5 136 2.5 3.0 2.8 1.3 188 chr2L 16487871 intergenic CG4580 + chr2L 16487965 intergenic CG4580 + chr2L 16488059 intergenic CG4580 + chr2L_5_16485001 chr2L_16485001 EF39_1-HE 584 chr2L 16497088 16497145 chr2L 16497190 16497247 8 102 3.5 2.0 2.8 2.1 159 chr2L 16497088 intron Tpr2 + chr2L 16497168 intron Tpr2 + chr2L 16497247 intron Tpr2 + chr2L_8_16495001 chr2L_16495001 EF39_1-HE 585 chr2L 16500453 16500473 chr2L 16500555 16500570 4 101 5.0 3.5 4.2 0.8 117 chr2L 16500453 intron Tpr2 + chr2L 16500512 intron Tpr2 + chr2L 16500570 intron Tpr2 + chr2L_4_16500001 chr2L_16500001 EF39_1-HE 586 chr2L 16508066 16508119 chr2L 16508176 16508229 19 110 2.5 6.0 4.2 3.7 163 chr2L 16508066 intergenic CG5953 -,Tpr2 + chr2L 16508148 3` UTR CG5953 - chr2L 16508229 3` UTR CG5953 - chr2L_19_16505001 chr2L_16505001 EF39_1-HE 587 chr2L 16511941 16511984 chr2L 16519089 16519132 HMS-Beagle 12 7147 4.5 3.0 3.8 2.5 7191 chr2L 16511941 intron CG5953 - chr2L 16515536 intron CG5953 - chr2L 16519132 intron CG5953 - chr2L_12_16515001 chr2L_16515001 EF39_1-HE 588 chr2L 16537309 16537355 chr2L 16537401 16537456 13 101 6.0 3.5 4.8 2.2 147 chr2L 16537309 intergenic not near genes chr2L 16537382 intergenic not near genes chr2L 16537456 intergenic not near genes chr2L_13_16535001 chr2L_16535001 EF39_1-HE 589 chr2L 16594090 16594141 chr2L 16594195 16594257 6 114 3.0 0.0 1.5 2.4 167 chr2L 16594090 intron CG42389 + chr2L 16594174 intron CG42389 + chr2L 16594257 intron CG42389 + chr2L_6_16590001 chr2L_16590001 EF39_1-HE 590 chr2L 16632654 16632707 chr2L 16632759 16632812 13 103 2.5 4.0 3.2 3.1 158 chr2L 16632654 intron CG42389 + chr2L 16632733 intron CG42389 + chr2L 16632812 intron CG42389 + chr2L_13_16630001 chr2L_16630001 EF39_1-HE 591 chr2L 16655208 16655261 chr2L 16655320 16655373 9 112 5.5 4.0 4.8 1.6 165 chr2L 16655208 intron CG42389 + chr2L 16655290 intron CG42389 + chr2L 16655373 intron CG42389 + chr2L_9_16655001 chr2L_16655001 EF39_1-HE 592 chr2L 16694108 16694113 chr2L 16694220 16694225 4 112 15.0 4.0 9.5 0.4 117 chr2L 16694108 intron grp + chr2L 16694166 intron grp + chr2L 16694225 intron grp + chr2L_4_16690001 chr2L_16690001 EF39_1-HE 593 chr2L 16694124 16694158 chr2L 16694218 16694264 11 110 7.5 4.0 5.8 1.6 140 chr2L 16694124 intron grp + chr2L 16694194 intron grp + chr2L 16694264 intron grp + chr2L_11_16690001 chr2L_16690001 EF39_1-HE 594 chr2L 16697045 16697085 chr2L 16697264 16697304 9 219 3.0 5.0 4.0 1.8 259 chr2L 16697045 intron grp + chr2L 16697174 intron grp + chr2L 16697304 intron grp + chr2L_9_16695001 chr2L_16695001 EF39_1-HE 595 chr2L 16709078 16709103 chr2L 16709188 16709213 6 110 3.0 4.0 3.5 1.3 135 chr2L 16709078 intron CG31808 - chr2L 16709146 intron CG31808 - chr2L 16709213 intron CG31808 - chr2L_6_16705001 chr2L_16705001 EF39_1-HE 596 chr2L 16728897 16728954 chr2L 16729558 16729615 14 661 6.0 7.5 6.8 1.8 718 chr2L 16728897 intergenic not near genes chr2L 16729256 intergenic not near genes chr2L 16729615 intergenic CG31812 + chr2L_14_16725001 chr2L_16725001 EF39_1-HE 597 chr2L 16840995 16841039 chr2L 16841097 16841141 7 101 2.5 4.5 3.5 1.6 146 chr2L 16840995 intron,intron SclA +,SclB + chr2L 16841068 intron,intron SclA +,SclB + chr2L 16841141 intron,intron SclA +,SclB + chr2L_7_16840001 chr2L_16840001 EF39_1-HE 598 chr2L 16880805 16880845 chr2L 16880913 16880953 13 108 2.5 2.5 2.5 3.7 148 chr2L 16880805 intron,intron CG31743 +,CG34313 + chr2L 16880879 intron,intron CG31743 +,CG34313 + chr2L 16880953 intron,intron CG31743 +,CG34313 + chr2L_13_16880001 chr2L_16880001 EF39_1-HE 599 chr2L 16958083 16958130 chr2L 16962897 16962944 Doc 10 4814 5.5 4.0 4.8 1.7 4861 chr2L 16958083 intergenic not near genes chr2L 16960514 intergenic not near genes chr2L 16962944 intergenic not near genes chr2L_10_16960001 chr2L_16960001 EF39_1-HE 600 chr2L 17002119 17002168 chr2L 17002229 17002282 8 114 3.0 4.5 3.8 1.7 163 chr2L 17002119 intergenic not near genes chr2L 17002200 intergenic not near genes chr2L 17002282 intergenic not near genes chr2L_8_17000001 chr2L_17000001 EF39_1-HE 601 chr2L 17010907 17010915 chr2L 17011079 17011088 4 173 9.5 4.5 7.0 0.5 181 chr2L 17010907 intergenic not near genes chr2L 17010998 intergenic CG6304 - chr2L 17011088 intergenic CG6304 - chr2L_4_17010001 chr2L_17010001 EF39_1-HE 602 chr2L 17010926 17010966 chr2L 17011077 17011135 24 170 2.0 4.5 3.2 5.7 209 chr2L 17010926 intergenic not near genes chr2L 17011030 intergenic CG6304 - chr2L 17011135 intergenic CG6304 - chr2L_24_17010001 chr2L_17010001 EF39_1-HE 603 chr2L 17020660 17020666 chr2L 17020763 17020769 4 103 8.0 11.5 9.8 0.4 109 chr2L 17020660 intergenic not near genes chr2L 17020714 intergenic not near genes chr2L 17020769 intergenic not near genes chr2L_4_17020001 chr2L_17020001 EF39_1-HE 604 chr2L 17033891 17033938 chr2L 17034002 17034049 16 111 4.5 3.0 3.8 3.3 158 chr2L 17033891 intergenic not near genes chr2L 17033970 intergenic not near genes chr2L 17034049 intergenic not near genes chr2L_16_17030001 chr2L_17030001 EF39_1-HE 605 chr2L 17062730 17062788 chr2L 17062838 17062896 12 108 4.5 3.0 3.8 2.5 166 chr2L 17062730 intergenic not near genes chr2L 17062813 intergenic not near genes chr2L 17062896 intergenic not near genes chr2L_12_17060001 chr2L_17060001 EF39_1-HE 606 chr2L 17089741 17089761 chr2L 17089854 17089874 9 111 5.5 6.5 6.0 1.3 133 chr2L 17089741 intergenic not near genes chr2L 17089808 intergenic not near genes chr2L 17089874 intergenic not near genes chr2L_9_17085001 chr2L_17085001 EF39_1-HE 607 chr2L 17154000 17154053 chr2L 17156304 17156348 15 2298 30.5 31.5 31.0 0.5 2348 chr2L 17154000 intron,intron CG34106 +,beat-IIIa + chr2L 17155174 intron,intron CG34106 +,beat-IIIa + chr2L 17156348 intron,intron CG34106 +,beat-IIIa + chr2L_15_17155001 chr2L_17155001 EF39_1-HE 608 chr2L 17158703 17158752 chr2L 17158832 17158881 9 129 4.5 3.0 3.8 1.9 178 chr2L 17158703 5` UTR,exon CG34106 +,beat-IIIa + chr2L 17158792 intron,intron CG34106 +,beat-IIIa + chr2L 17158881 intron,intron CG34106 +,beat-IIIa + chr2L_9_17155001 chr2L_17155001 EF39_1-HE 609 chr2L 17159831 17159876 chr2L 17159940 17159980 11 108 4.5 3.0 3.8 2.3 149 chr2L 17159831 intron,intron CG34106 +,beat-IIIa + chr2L 17159906 intron,intron CG34106 +,beat-IIIa + chr2L 17159980 intron,intron CG34106 +,beat-IIIa + chr2L_11_17155001 chr2L_17155001 EF39_1-HE 610 chr2L 17167543 17167581 chr2L 17167810 17167848 pogo 16 266 5.0 4.5 4.8 2.8 305 chr2L 17167543 intron,intron CG34106 +,beat-IIIa + chr2L 17167696 intron,intron CG34106 +,beat-IIIa + chr2L 17167848 intron,intron CG34106 +,beat-IIIa + chr2L_16_17165001 chr2L_17165001 EF39_1-HE 611 chr2L 17185402 17185448 chr2L 17185528 17185574 10 126 3.5 3.5 3.5 2.2 172 chr2L 17185402 intergenic not near genes chr2L 17185488 intergenic not near genes chr2L 17185574 intergenic not near genes chr2L_10_17185001 chr2L_17185001 EF39_1-HE 612 chr2L 17195886 17195937 chr2L 17195996 17196047 15 110 5.0 4.5 4.8 2.6 161 chr2L 17195886 intron beat-IIIc - chr2L 17195966 intron beat-IIIc - chr2L 17196047 intron beat-IIIc - chr2L_15_17195001 chr2L_17195001 EF39_1-HE 613 chr2L 17198900 17198949 chr2L 17199011 17199060 16 111 3.0 5.0 4.0 3.2 160 chr2L 17198900 intron beat-IIIc - chr2L 17198980 intron beat-IIIc - chr2L 17199060 intron beat-IIIc - chr2L_16_17195001 chr2L_17195001 EF39_1-HE 614 chr2L 17199147 17199182 chr2L 17200640 17200675 hobo 14 1493 6.0 6.0 6.0 2.0 1528 chr2L 17199147 intron beat-IIIc - chr2L 17199911 intron beat-IIIc - chr2L 17200675 intron beat-IIIc - chr2L_14_17195001 chr2L_17195001 EF39_1-HE 615 chr2L 17214100 17214139 chr2L 17214280 17214319 9 180 5.0 4.0 4.5 1.6 219 chr2L 17214100 intron beat-IIIc - chr2L 17214210 intron beat-IIIc - chr2L 17214319 intron beat-IIIc - chr2L_9_17210001 chr2L_17210001 EF39_1-HE 616 chr2L 17244131 17244178 chr2L 17244277 17244324 14 146 2.5 4.5 3.5 3.1 193 chr2L 17244131 intron beat-IIIc - chr2L 17244228 intron beat-IIIc - chr2L 17244324 intron beat-IIIc - chr2L_14_17240001 chr2L_17240001 EF39_1-HE 617 chr2L 17260855 17260873 chr2L 17260963 17260982 6 109 6.5 3.0 4.8 1.0 127 chr2L 17260855 intergenic beat-IIIc - chr2L 17260918 intergenic beat-IIIc - chr2L 17260982 intergenic beat-IIIc - chr2L_6_17260001 chr2L_17260001 EF39_1-HE 618 chr2L 17273170 17273221 chr2L 17277979 17278029 F-element 16 4808 3.5 1.5 2.5 4.6 4859 chr2L 17273170 intergenic not near genes chr2L 17275600 intergenic not near genes chr2L 17278029 intergenic not near genes chr2L_16_17275001 chr2L_17275001 EF39_1-HE 619 chr2L 17289207 17289252 chr2L 17289311 17289357 17 104 4.5 0.5 2.5 4.9 150 chr2L 17289207 intergenic not near genes chr2L 17289282 intergenic not near genes chr2L 17289357 intergenic not near genes chr2L_17_17285001 chr2L_17285001 EF39_1-HE 620 chr2L 17290632 17290682 chr2L 17290741 17290791 18 108 6.0 4.5 5.2 2.9 159 chr2L 17290632 intergenic CG6380 - chr2L 17290712 intergenic CG6380 - chr2L 17290791 intergenic CG6380 - chr2L_18_17290001 chr2L_17290001 EF39_1-HE 621 chr2L 17292337 17292390 chr2L 17292443 17292497 11 106 4.0 3.5 3.8 2.3 160 chr2L 17292337 intergenic CG6380 - chr2L 17292417 intergenic CG6380 - chr2L 17292497 intergenic CG6380 - chr2L_11_17290001 chr2L_17290001 EF39_1-HE 622 chr2L 17327889 17327925 chr2L 17328001 17328037 12 111 5.5 3.0 4.2 2.3 148 chr2L 17327889 intergenic not near genes chr2L 17327963 intergenic not near genes chr2L 17328037 intergenic not near genes chr2L_12_17325001 chr2L_17325001 EF39_1-HE 623 chr2L 17334613 17334639 chr2L 17335104 17335130 4 491 1.0 5.0 3.0 1.0 517 chr2L 17334613 intergenic not near genes chr2L 17334872 intergenic not near genes chr2L 17335130 intergenic not near genes chr2L_4_17330001 chr2L_17330001 EF39_1-HE 624 chr2L 17335527 17335581 chr2L 17336719 17336772 1360 9 1187 2.5 5.0 3.8 1.9 1245 chr2L 17335527 intergenic not near genes chr2L 17336150 intergenic not near genes chr2L 17336772 intergenic not near genes chr2L_9_17335001 chr2L_17335001 EF39_1-HE 625 chr2L 17339115 17339155 chr2L 17339218 17339258 10 103 1.5 4.5 3.0 2.5 143 chr2L 17339115 intergenic not near genes chr2L 17339186 intergenic not near genes chr2L 17339258 intergenic not near genes chr2L_10_17335001 chr2L_17335001 EF39_1-HE 626 chr2L 17379687 17379706 chr2L 17379798 17379817 15 111 3.5 4.5 4.0 3.0 130 chr2L 17379687 intron Lrch - chr2L 17379752 intron Lrch - chr2L 17379817 intron Lrch - chr2L_15_17375001 chr2L_17375001 EF39_1-HE 627 chr2L 17380587 17380635 chr2L 17380694 17380751 13 109 32.0 36.5 34.2 0.4 164 chr2L 17380587 intron Lrch - chr2L 17380669 intron Lrch - chr2L 17380751 intron Lrch - chr2L_13_17380001 chr2L_17380001 EF39_1-HE 628 chr2L 17420891 17420912 chr2L 17420998 17421019 6 107 0.0 6.0 3.0 1.5 128 chr2L 17420891 intron Dif - chr2L 17420955 intron Dif - chr2L 17421019 intron Dif - chr2L_6_17420001 chr2L_17420001 EF39_1-HE 629 chr2L 17424238 17424284 chr2L 17424422 17424468 6 184 3.0 1.0 2.0 2.0 230 chr2L 17424238 intron Dif - chr2L 17424353 intron Dif - chr2L 17424468 intron Dif - chr2L_6_17420001 chr2L_17420001 EF39_1-HE 630 chr2L 17425741 17425793 chr2L 17425894 17425946 11 153 2.5 1.5 2.0 3.7 205 chr2L 17425741 intron Dif - chr2L 17425844 intron Dif - chr2L 17425946 intron Dif - chr2L_11_17425001 chr2L_17425001 EF39_1-HE 631 chr2L 17432003 17432017 chr2L 17432136 17432150 1360 5 133 0.0 1.0 0.5 3.3 147 chr2L 17432003 intron Dif - chr2L 17432076 intron Dif - chr2L 17432150 intron Dif - chr2L_5_17430001 chr2L_17430001 EF39_1-HE 632 chr2L 17540852 17540907 chr2L 17540975 17541031 9 121 1.0 3.0 2.0 3.0 179 chr2L 17540852 intergenic not near genes chr2L 17540942 intergenic not near genes chr2L 17541031 intergenic not near genes chr2L_9_17540001 chr2L_17540001 EF39_1-HE 633 chr2L 17561747 17561785 chr2L 17561856 17561895 8 110 10.0 7.0 8.5 0.8 148 chr2L 17561747 intergenic not near genes chr2L 17561821 intergenic not near genes chr2L 17561895 intergenic not near genes chr2L_8_17560001 chr2L_17560001 EF39_1-HE 634 chr2L 17577709 17577738 chr2L 17577811 17577840 4 102 1.0 8.5 4.8 0.7 131 chr2L 17577709 intergenic not near genes chr2L 17577774 intergenic not near genes chr2L 17577840 intergenic not near genes chr2L_4_17575001 chr2L_17575001 EF39_1-HE 635 chr2L 17603431 17603475 chr2L 17603546 17603590 15 114 3.0 5.0 4.0 3.0 159 chr2L 17603431 3` UTR Sytalpha + chr2L 17603510 3` UTR Sytalpha + chr2L 17603590 3` UTR Sytalpha + chr2L_15_17600001 chr2L_17600001 EF39_1-HE 636 chr2L 17607458 17607474 chr2L 17607582 17607598 7 124 6.0 1.0 3.5 1.6 140 chr2L 17607458 intergenic CR44412 - chr2L 17607528 intergenic CR44412 - chr2L 17607598 intergenic CR44412 - chr2L_7_17605001 chr2L_17605001 EF39_1-HE 637 chr2L 17616468 17616499 chr2L 17616580 17616611 8 112 4.0 5.5 4.8 1.4 143 chr2L 17616468 intergenic not near genes chr2L 17616540 intergenic not near genes chr2L 17616611 intergenic not near genes chr2L_8_17615001 chr2L_17615001 EF39_1-HE 638 chr2L 17664462 17664517 chr2L 17665108 17665163 17 646 3.0 2.5 2.8 4.5 701 chr2L 17664462 intron CadN - chr2L 17664812 intron CadN - chr2L 17665163 intron CadN - chr2L_17_17660001 chr2L_17660001 EF39_1-HE 639 chr2L 17675252 17675310 chr2L 17675370 17675428 22 117 4.0 5.0 4.5 4.0 176 chr2L 17675252 intron CadN - chr2L 17675340 intron CadN - chr2L 17675428 intron CadN - chr2L_22_17675001 chr2L_17675001 EF39_1-HE 640 chr2L 17687495 17687522 chr2L 17692266 17692293 F-element 14 4771 6.5 4.5 5.5 2.2 4798 chr2L 17687495 intron CadN - chr2L 17689894 intron CadN - chr2L 17692293 intron CadN - chr2L_14_17685001 chr2L_17685001 EF39_1-HE 641 chr2L 17723766 17723801 chr2L 17723885 17723920 6 119 3.5 2.5 3.0 1.5 154 chr2L 17723766 intron CadN - chr2L 17723843 intron CadN - chr2L 17723920 intron CadN - chr2L_6_17720001 chr2L_17720001 EF39_1-HE 642 chr2L 17727843 17727871 chr2L 17729336 17729364 hobo 7 1493 2.0 4.0 3.0 1.8 1521 chr2L 17727843 intron CadN - chr2L 17728604 intron CadN - chr2L 17729364 intron CadN - chr2L_7_17725001 chr2L_17725001 EF39_1-HE 643 chr2L 17741850 17741901 chr2L 17742006 17742057 11 156 2.0 1.5 1.8 3.9 207 chr2L 17741850 intron CadN - chr2L 17741954 intron CadN - chr2L 17742057 intron CadN - chr2L_11_17740001 chr2L_17740001 EF39_1-HE 644 chr2L 17805807 17805852 chr2L 17805916 17805961 12 108 2.0 5.5 3.8 2.5 154 chr2L 17805807 intron CadN2 - chr2L 17805884 intron CadN2 - chr2L 17805961 intron CadN2 - chr2L_12_17805001 chr2L_17805001 EF39_1-HE 645 chr2L 17819899 17819949 chr2L 17825128 17825178 copia 11 5227 5.5 3.5 4.5 2.0 5279 chr2L 17819899 intron CadN2 - chr2L 17822538 intron CadN2 - chr2L 17825178 intron CadN2 - chr2L_11_17820001 chr2L_17820001 EF39_1-HE 646 chr2L 17839295 17839341 chr2L 17839397 17839443 5 102 2.5 5.0 3.8 1.0 148 chr2L 17839295 intron CadN2 - chr2L 17839369 intron CadN2 - chr2L 17839443 intron CadN2 - chr2L_5_17835001 chr2L_17835001 EF39_1-HE 647 chr2L 17843195 17843246 chr2L 17843308 17843359 16 113 2.5 3.0 2.8 4.2 164 chr2L 17843195 intron CadN2 - chr2L 17843277 intron CadN2 - chr2L 17843359 intron CadN2 - chr2L_16_17840001 chr2L_17840001 EF39_1-HE 648 chr2L 17845114 17845165 chr2L 17845233 17845284 6 115 1.5 2.5 2.0 2.0 170 chr2L 17845114 intron CadN2 - chr2L 17845199 intron CadN2 - chr2L 17845284 intron CadN2 - chr2L_6_17845001 chr2L_17845001 EF39_1-HE 649 chr2L 17906746 17906787 chr2L 17906849 17906896 10 107 3.5 6.0 4.8 1.7 150 chr2L 17906746 intergenic not near genes chr2L 17906821 intergenic not near genes chr2L 17906896 intergenic not near genes chr2L_10_17905001 chr2L_17905001 EF39_1-HE 650 chr2L 17911937 17911988 chr2L 17914141 17914192 pogo 13 2204 3.0 6.5 4.8 2.2 2255 chr2L 17911937 intergenic not near genes chr2L 17913064 intergenic not near genes chr2L 17914192 intergenic CG43271 - chr2L_13_17910001 chr2L_17910001 EF39_1-HE 651 chr2L 17950704 17950751 chr2L 17950807 17950854 13 103 3.5 5.0 4.2 2.5 150 chr2L 17950704 intron,3` UTR CR44398 -,CR44397 - chr2L 17950779 intron,3` UTR CR44398 -,CR44397 - chr2L 17950854 intron,3` UTR CR44398 -,CR44397 - chr2L_13_17950001 chr2L_17950001 EF39_1-HE 652 chr2L 17951917 17951971 chr2L 17953410 17953464 hobo 16 1493 5.5 6.0 5.8 2.4 1547 chr2L 17951917 intergenic CR44398 -,CR44397 - chr2L 17952690 intergenic not near genes chr2L 17953464 intergenic not near genes chr2L_16_17950001 chr2L_17950001 EF39_1-HE 653 chr2L 17961676 17961688 chr2L 17961787 17961801 5 111 3.5 3.5 3.5 1.1 125 chr2L 17961676 intergenic not near genes chr2L 17961738 intergenic not near genes chr2L 17961801 intergenic not near genes chr2L_5_17960001 chr2L_17960001 EF39_1-HE 654 chr2L 17984240 17984294 chr2L 17984352 17984403 8 113 3.0 3.0 3.0 2.0 163 chr2L 17984240 intergenic not near genes chr2L 17984322 intergenic not near genes chr2L 17984403 intergenic not near genes chr2L_8_17980001 chr2L_17980001 EF39_1-HE 655 chr2L 17994228 17994288 chr2L 17994333 17994393 21 105 4.5 4.0 4.2 4.0 165 chr2L 17994228 3` UTR CR44767 - chr2L 17994310 intergenic CR44767 - chr2L 17994393 intergenic CR44767 - chr2L_21_17990001 chr2L_17990001 EF39_1-HE 656 chr2L 18016440 18016490 chr2L 18016546 18016596 11 106 1.5 5.0 3.2 2.6 156 chr2L 18016440 intron rdo + chr2L 18016518 intron rdo + chr2L 18016596 intron rdo + chr2L_11_18015001 chr2L_18015001 EF39_1-HE 657 chr2L 18031996 18032037 chr2L 18032132 18032173 12 136 4.0 2.0 3.0 3.0 177 chr2L 18031996 intron rdo + chr2L 18032084 intron rdo + chr2L 18032173 intron rdo + chr2L_12_18030001 chr2L_18030001 EF39_1-HE 658 chr2L 18051850 18051901 chr2L 18061023 18061074 roo 17 9172 4.0 3.5 3.8 3.5 9224 chr2L 18051850 intron rdo + chr2L 18056462 intron rdo + chr2L 18061074 intron rdo + chr2L_17_18055001 chr2L_18055001 EF39_1-HE 659 chr2L 18079792 18079848 chr2L 18079904 18079960 19 112 2.0 1.5 1.8 6.8 168 chr2L 18079792 intron Arr1 + chr2L 18079876 intron Arr1 + chr2L 18079960 exon Arr1 + chr2L_19_18075001 chr2L_18075001 EF39_1-HE 660 chr2L 18111220 18111235 chr2L 18111337 18111352 6 117 7.0 0.0 3.5 1.3 132 chr2L 18111220 intergenic not near genes chr2L 18111286 intergenic not near genes chr2L 18111352 intergenic not near genes chr2L_6_18110001 chr2L_18110001 EF39_1-HE 661 chr2L 18175381 18175437 chr2L 18175508 18175565 11 127 3.5 3.5 3.5 2.4 184 chr2L 18175381 intron CG42750 - chr2L 18175473 intron CG42750 - chr2L 18175565 intron CG42750 - chr2L_11_18175001 chr2L_18175001 EF39_1-HE 662 chr2L 18194287 18194339 chr2L 18194393 18194445 13 103 3.0 3.0 3.0 3.2 158 chr2L 18194287 intron CG42750 - chr2L 18194366 intron CG42750 - chr2L 18194445 intron CG42750 - chr2L_13_18190001 chr2L_18190001 EF39_1-HE 663 chr2L 18208240 18208289 chr2L 18208348 18208397 10 108 3.5 3.0 3.2 2.4 157 chr2L 18208240 intron CG42750 - chr2L 18208318 intron CG42750 - chr2L 18208397 intron CG42750 - chr2L_10_18205001 chr2L_18205001 EF39_1-HE 664 chr2L 18215258 18215309 chr2L 18215382 18215433 16 124 8.5 2.5 5.5 2.5 175 chr2L 18215258 intron CG42750 - chr2L 18215346 intron CG42750 - chr2L 18215433 intron CG42750 - chr2L_16_18215001 chr2L_18215001 EF39_1-HE 665 chr2L 18256287 18256338 chr2L 18256403 18256454 12 116 4.0 4.0 4.0 2.4 167 chr2L 18256287 intron CG42750 - chr2L 18256370 intron CG42750 - chr2L 18256454 intron CG42750 - chr2L_12_18255001 chr2L_18255001 EF39_1-HE 666 chr2L 18264047 18264149 chr2L 18264146 18264263 17 103 9.0 6.0 7.5 2.0 216 chr2L 18264047 intron CG42750 - chr2L 18264155 intron CG42750 - chr2L 18264263 intron CG42750 - chr2L_17_18260001 chr2L_18260001 EF39_1-HE 667 chr2L 18288735 18288777 chr2L 18288918 18288960 7 183 4.0 4.5 4.2 1.3 225 chr2L 18288735 intergenic not near genes chr2L 18288848 intergenic not near genes chr2L 18288960 intergenic not near genes chr2L_7_18285001 chr2L_18285001 EF39_1-HE 668 chr2L 18291503 18291531 chr2L 18291627 18291655 7 124 5.0 0.0 2.5 2.0 152 chr2L 18291503 intergenic CG43362 -,CR44693 +,CR44696 - chr2L 18291579 intergenic CR44693 +,CG43362 -,CR44696 - chr2L 18291655 intergenic CR44693 +,CG43362 -,CR44696 - chr2L_7_18290001 chr2L_18290001 EF39_1-HE 669 chr2L 18307870 18307903 chr2L 18307973 18308001 9 102 6.5 3.5 5.0 1.5 131 chr2L 18307870 intergenic CR43353 - chr2L 18307936 intergenic CR43353 - chr2L 18308001 intergenic CR43353 - chr2L_9_18305001 chr2L_18305001 EF39_1-HE 670 chr2L 18311556 18311570 chr2L 18311666 18311680 4 110 0.0 6.0 3.0 1.0 124 chr2L 18311556 intergenic CR45721 + chr2L 18311618 intergenic CR45721 + chr2L 18311680 intergenic CR45721 + chr2L_4_18310001 chr2L_18310001 EF39_1-HE 671 chr2L 18367992 18368050 chr2L 18368230 18368288 13 237 3.0 5.0 4.0 2.6 296 chr2L 18367992 intron Fas3 + chr2L 18368140 intron Fas3 + chr2L 18368288 intron Fas3 + chr2L_13_18365001 chr2L_18365001 EF39_1-HE 672 chr2L 18394373 18394430 chr2L 18394483 18394539 14 110 2.5 4.0 3.2 3.3 166 chr2L 18394373 intergenic not near genes chr2L 18394456 intergenic not near genes chr2L 18394539 intergenic not near genes chr2L_14_18390001 chr2L_18390001 EF39_1-HE 673 chr2L 18401868 18401917 chr2L 18402062 18402110 11 195 1.5 2.5 2.0 3.7 242 chr2L 18401868 intergenic not near genes chr2L 18401989 intergenic not near genes chr2L 18402110 intergenic not near genes chr2L_11_18400001 chr2L_18400001 EF39_1-HE 674 chr2L 18408015 18408059 chr2L 18412824 18412876 Doc 7 4809 4.5 0.0 2.2 2.2 4861 chr2L 18408015 intergenic not near genes chr2L 18410446 intergenic not near genes chr2L 18412876 intergenic not near genes chr2L_7_18410001 chr2L_18410001 EF39_1-HE 675 chr2L 18421779 18421822 chr2L 18421892 18421936 6 112 2.5 4.5 3.5 1.3 157 chr2L 18421779 intergenic not near genes chr2L 18421858 intergenic not near genes chr2L 18421936 intergenic not near genes chr2L_6_18420001 chr2L_18420001 EF39_1-HE 676 chr2L 18423829 18423874 chr2L 18423946 18423991 8 117 2.5 3.0 2.8 2.1 162 chr2L 18423829 intergenic not near genes chr2L 18423910 intergenic not near genes chr2L 18423991 intergenic not near genes chr2L_8_18420001 chr2L_18420001 EF39_1-HE 677 chr2L 18431158 18431188 chr2L 18431284 18431313 4 126 4.0 2.5 3.2 1.0 155 chr2L 18431158 intergenic not near genes chr2L 18431236 intergenic not near genes chr2L 18431313 intergenic not near genes chr2L_4_18430001 chr2L_18430001 EF39_1-HE 678 chr2L 18431466 18431514 chr2L 18431568 18431611 8 99 2.0 5.0 3.5 1.8 145 chr2L 18431466 intergenic not near genes chr2L 18431538 intergenic not near genes chr2L 18431611 intergenic not near genes chr2L_8_18430001 chr2L_18430001 EF39_1-HE 679 chr2L 18442098 18442375 chr2L 18442256 18442480 15 109 5.5 29.0 17.2 0.8 382 chr2L 18442098 3` UTR RpS26 - chr2L 18442289 3` UTR RpS26 - chr2L 18442480 3` UTR RpS26 - chr2L_15_18440001 chr2L_18440001 EF39_1-HE 680 chr2L 18443357 18443366 chr2L 18443459 18443468 8 102 2.5 4.5 3.5 1.8 111 chr2L 18443357 intergenic RpS26 - chr2L 18443412 intergenic RpS26 - chr2L 18443468 intergenic RpS26 - chr2L_8_18440001 chr2L_18440001 EF39_1-HE 681 chr2L 18475011 18475032 chr2L 18475113 18475134 11 102 2.5 5.0 3.8 2.3 123 chr2L 18475011 intron CG10283 - chr2L 18475072 intron CG10283 - chr2L 18475134 intron CG10283 - chr2L_11_18475001 chr2L_18475001 EF39_1-HE 682 chr2L 18538543 18538599 chr2L 18538651 18538705 14 107 1.0 4.0 2.5 4.0 162 chr2L 18538543 intron Pde11 - chr2L 18538624 intron Pde11 - chr2L 18538705 intron Pde11 - chr2L_14_18535001 chr2L_18535001 EF39_1-HE 683 chr2L 18561540 18561577 chr2L 18561658 18561695 17 118 5.0 4.5 4.8 2.9 155 chr2L 18561540 intron Pde11 - chr2L 18561618 intron Pde11 - chr2L 18561695 intron Pde11 - chr2L_17_18560001 chr2L_18560001 EF39_1-HE 684 chr2L 18621023 18621063 chr2L 18621138 18621178 6 115 4.0 2.0 3.0 1.5 155 chr2L 18621023 intron MESR3 + chr2L 18621100 intron MESR3 + chr2L 18621178 intron MESR3 + chr2L_6_18620001 chr2L_18620001 EF39_1-HE 685 chr2L 18663342 18663395 chr2L 18663448 18663501 13 106 6.0 6.0 6.0 1.9 159 chr2L 18663342 intergenic not near genes chr2L 18663422 intergenic not near genes chr2L 18663501 intergenic not near genes chr2L_13_18660001 chr2L_18660001 EF39_1-HE 686 chr2L 18694016 18694054 chr2L 18694123 18694161 7 107 1.5 2.0 1.8 2.5 145 chr2L 18694016 intron CG10383 - chr2L 18694088 intron CG10383 - chr2L 18694161 intron CG10383 - chr2L_7_18690001 chr2L_18690001 EF39_1-HE 687 chr2L 18721246 18721288 chr2L 18721367 18721409 17 120 6.5 12.0 9.2 1.7 163 chr2L 18721246 intron CG10348 - chr2L 18721328 intron CG10348 - chr2L 18721409 intron CG10348 - chr2L_17_18720001 chr2L_18720001 EF39_1-HE 688 chr2L 18798244 18798285 chr2L 18798347 18798388 16 103 4.0 8.0 6.0 2.3 144 chr2L 18798244 intergenic not near genes chr2L 18798316 intergenic not near genes chr2L 18798388 intergenic not near genes chr2L_16_18795001 chr2L_18795001 EF39_1-HE 689 chr2L 18811393 18811428 chr2L 18811501 18811536 6 108 4.0 0.0 2.0 2.0 143 chr2L 18811393 intergenic CG10570 -,CG42502 - chr2L 18811464 intergenic CG10570 -,CG42502 - chr2L 18811536 intergenic not near genes chr2L_6_18810001 chr2L_18810001 EF39_1-HE 690 chr2L 18898374 18898420 chr2L 18898479 18898528 24 107 7.5 0.0 3.8 5.0 154 chr2L 18898374 intergenic not near genes chr2L 18898451 intergenic not near genes chr2L 18898528 intergenic not near genes chr2L_24_18895001 chr2L_18895001 EF39_1-HE 691 chr2L 18902603 18902648 chr2L 18902910 18902955 12 307 3.0 4.0 3.5 2.7 352 chr2L 18902603 intergenic not near genes chr2L 18902779 intergenic not near genes chr2L 18902955 intergenic not near genes chr2L_12_18900001 chr2L_18900001 EF39_1-HE 692 chr2L 18926571 18926587 chr2L 18926704 18926720 6 133 2.0 3.5 2.8 1.6 149 chr2L 18926571 intron ssp3 - chr2L 18926646 intron ssp3 - chr2L 18926720 intron ssp3 - chr2L_6_18925001 chr2L_18925001 EF39_1-HE 693 chr2L 18981725 18981770 chr2L 18981828 18981873 6 103 5.0 2.5 3.8 1.2 148 chr2L 18981725 intron Swip-1 - chr2L 18981799 intron Swip-1 - chr2L 18981873 intron Swip-1 - chr2L_6_18980001 chr2L_18980001 EF39_1-HE 694 chr2L 18998876 18998902 chr2L 18998984 18999010 9 105 4.5 4.0 4.2 1.7 134 chr2L 18998876 intron CG31792 + chr2L 18998943 exon CG31792 + chr2L 18999010 exon CG31792 + chr2L_9_18995001 chr2L_18995001 EF39_1-HE 695 chr2L 19071846 19071880 chr2L 19071949 19071983 8 103 3.5 3.5 3.5 1.8 137 chr2L 19071846 intron CG17572 - chr2L 19071914 intron CG17572 - chr2L 19071983 intron CG17572 - chr2L_8_19070001 chr2L_19070001 EF39_1-HE 696 chr2L 19099124 19099166 chr2L 19099524 19099566 4 400 4.0 3.5 3.8 0.8 442 chr2L 19099124 intron Lim3 - chr2L 19099345 intron Lim3 - chr2L 19099566 intron Lim3 - chr2L_4_19095001 chr2L_19095001 EF39_1-HE 697 chr2L 19121013 19121066 chr2L 19121117 19121170 16 104 4.5 3.5 4.0 3.2 157 chr2L 19121013 intergenic l(2)37Cc - chr2L 19121092 intergenic l(2)37Cc - chr2L 19121170 intergenic l(2)37Cc - chr2L_16_19120001 chr2L_19120001 EF39_1-HE 698 chr2L 19121534 19121548 chr2L 19121641 19121655 5 107 2.0 8.5 5.2 0.8 121 chr2L 19121534 3` UTR l(2)37Cc - chr2L 19121594 3` UTR l(2)37Cc - chr2L 19121655 3` UTR l(2)37Cc - chr2L_5_19120001 chr2L_19120001 EF39_1-HE 699 chr2L 19121549 19121563 chr2L 19121635 19121670 4 101 2.0 7.0 4.5 0.7 121 chr2L 19121549 3` UTR l(2)37Cc - chr2L 19121610 3` UTR l(2)37Cc - chr2L 19121670 3` UTR l(2)37Cc - chr2L_4_19120001 chr2L_19120001 EF39_1-HE 700 chr2L 19145181 19145184 chr2L 19145294 19145297 5 113 8.5 5.5 7.0 0.6 116 chr2L 19145181 intron brat + chr2L 19145239 intron brat + chr2L 19145297 intron brat + chr2L_5_19145001 chr2L_19145001 EF39_1-HE 701 chr2L 19147342 19147392 chr2L 19154403 19154453 297 19 7061 3.5 6.5 5.0 3.2 7111 chr2L 19147342 intron brat + chr2L 19150898 intron brat + chr2L 19154453 intron brat + chr2L_19_19150001 chr2L_19150001 EF39_1-HE 702 chr2L 19199658 19199704 chr2L 19199761 19199807 16 103 4.5 6.0 5.2 2.6 149 chr2L 19199658 intron drl + chr2L 19199732 intron drl + chr2L 19199807 intron drl + chr2L_16_19195001 chr2L_19195001 EF39_1-HE 703 chr2L 19204437 19204479 chr2L 19204837 19204863 6 395 7.5 13.5 10.5 0.5 426 chr2L 19204437 intron drl + chr2L 19204650 intron drl + chr2L 19204863 intron drl + chr2L_6_19200001 chr2L_19200001 EF39_1-HE 704 chr2L 19226878 19226920 chr2L 19226990 19227032 10 112 4.0 2.0 3.0 2.5 154 chr2L 19226878 intergenic not near genes chr2L 19226955 intergenic not near genes chr2L 19227032 intergenic not near genes chr2L_10_19225001 chr2L_19225001 EF39_1-HE 705 chr2L 19278520 19278563 chr2L 19279082 19279125 5 562 3.0 3.0 3.0 1.2 605 chr2L 19278520 intergenic not near genes chr2L 19278822 intergenic not near genes chr2L 19279125 intergenic not near genes chr2L_5_19275001 chr2L_19275001 EF39_1-HE 706 chr2L 19287752 19287790 chr2L 19287891 19287929 7 138 3.0 5.0 4.0 1.4 177 chr2L 19287752 intergenic not near genes chr2L 19287840 intergenic not near genes chr2L 19287929 intergenic not near genes chr2L_7_19285001 chr2L_19285001 EF39_1-HE 707 chr2L 19316170 19316208 chr2L 19316273 19316311 4 103 3.0 0.5 1.8 1.4 141 chr2L 19316170 intergenic not near genes chr2L 19316240 intergenic not near genes chr2L 19316311 intergenic not near genes chr2L_4_19315001 chr2L_19315001 EF39_1-HE 708 chr2L 19317963 19318017 chr2L 19318067 19318121 9 104 0.0 1.5 0.8 5.0 158 chr2L 19317963 intergenic not near genes chr2L 19318042 intergenic not near genes chr2L 19318121 intergenic not near genes chr2L_9_19315001 chr2L_19315001 EF39_1-HE 709 chr2L 19328412 19328441 chr2L 19328522 19328551 4 104 1.5 4.0 2.8 1.1 139 chr2L 19328412 intergenic CR45258 + chr2L 19328482 intergenic not near genes chr2L 19328551 intergenic not near genes chr2L_4_19325001 chr2L_19325001 EF39_1-HE 710 chr2L 19345001 19345039 chr2L 19357236 19357273 blood 5 12235 3.0 4.0 3.5 1.1 12272 chr2L 19345001 intron dnt - chr2L 19351137 intron dnt - chr2L 19357273 intron dnt - chr2L_5_19350001 chr2L_19350001 EF39_1-HE 711 chr2L 19357519 19357561 chr2L 19357635 19357673 15 116 4.0 2.0 3.0 3.8 154 chr2L 19357519 intron dnt - chr2L 19357596 intron dnt - chr2L 19357673 intron dnt - chr2L_15_19355001 chr2L_19355001 EF39_1-HE 712 chr2L 19405617 19405641 chr2L 19405733 19405757 12 115 1.0 3.0 2.0 4.0 140 chr2L 19405617 intron Pax - chr2L 19405687 intron Pax - chr2L 19405757 intron Pax - chr2L_12_19405001 chr2L_19405001 EF39_1-HE 713 chr2L 19441041 19441073 chr2L 19441144 19441176 5 103 3.5 3.0 3.2 1.2 135 chr2L 19441041 intron CG10237 - chr2L 19441108 intron CG10237 - chr2L 19441176 5` UTR CG10237 - chr2L_5_19440001 chr2L_19440001 EF39_1-HE 714 chr2L 19559532 19559578 chr2L 19559795 19559841 19 263 3.0 2.5 2.8 5.0 309 chr2L 19559532 intron Tep5 + chr2L 19559686 exon Tep5 + chr2L 19559841 exon Tep5 + chr2L_19_19555001 chr2L_19555001 EF39_1-HE 715 chr2L 19559977 19560038 chr2L 19560256 19560316 13 278 4.0 1.5 2.8 3.4 339 chr2L 19559977 exon Tep5 + chr2L 19560146 exon Tep5 + chr2L 19560316 intron Tep5 + chr2L_13_19560001 chr2L_19560001 EF39_1-HE 716 chr2L 19601551 19601598 chr2L 19601654 19601701 5 103 0.5 3.5 2.0 1.7 150 chr2L 19601551 intron,intron Lar +,CR44978 - chr2L 19601626 intron,intron Lar +,CR44978 - chr2L 19601701 intron,intron Lar +,CR44978 - chr2L_5_19600001 chr2L_19600001 EF39_1-HE 717 chr2L 19615280 19615297 chr2L 19615390 19615407 8 110 0.0 9.5 4.8 1.4 127 chr2L 19615280 intron Lar + chr2L 19615344 intron Lar + chr2L 19615407 intron Lar + chr2L_8_19615001 chr2L_19615001 EF39_1-HE 718 chr2L 19620073 19620127 chr2L 19621085 19621141 jockey 30 1015 9.0 6.0 7.5 3.5 1068 chr2L 19620073 intron Lar + chr2L 19620607 intron Lar + chr2L 19621141 intron Lar + chr2L_30_19620001 chr2L_19620001 EF39_1-HE 719 chr2L 19652544 19652599 chr2L 19674006 19674061 opus 13 21461 7.0 3.0 5.0 2.2 21517 chr2L 19652544 intron Lar + chr2L 19663302 intron Lar + chr2L 19674061 intron Lar + chr2L_13_19660001 chr2L_19660001 EF39_1-HE 720 chr2L 19703514 19703568 chr2L 19712676 19712725 roo 29 9161 7.0 7.5 7.2 3.5 9211 chr2L 19703514 intron Lar + chr2L 19708120 intron Lar + chr2L 19712725 intron Lar + chr2L_29_19705001 chr2L_19705001 EF39_1-HE 721 chr2L 19713969 19714009 chr2L 19714073 19714115 19 105 7.5 8.5 8.0 2.1 146 chr2L 19713969 intron Lar + chr2L 19714042 intron Lar + chr2L 19714115 intron Lar + chr2L_19_19710001 chr2L_19710001 EF39_1-HE 722 chr2L 19718492 19718517 chr2L 19718613 19718638 9 118 7.5 12.0 9.8 0.8 146 chr2L 19718492 intron Lar + chr2L 19718565 intron Lar + chr2L 19718638 intron Lar + chr2L_9_19715001 chr2L_19715001 EF39_1-HE 723 chr2L 19737329 19737382 chr2L 19740824 19740877 1360 9 3492 3.5 5.5 4.5 1.6 3548 chr2L 19737329 intergenic Nf-YB + chr2L 19739103 intergenic not near genes chr2L 19740877 intergenic not near genes chr2L_9_19735001 chr2L_19735001 EF39_1-HE 724 chr2L 19762790 19762820 chr2L 19763058 19763088 pogo 4 268 4.5 4.5 4.5 0.7 298 chr2L 19762790 5` UTR fbp - chr2L 19762939 intron fbp - chr2L 19763088 intron fbp - chr2L_4_19760001 chr2L_19760001 EF39_1-HE 725 chr2L 19803840 19803880 chr2L 19803955 19803995 4 115 2.5 2.5 2.5 1.1 155 chr2L 19803840 intron sick + chr2L 19803918 intron sick + chr2L 19803995 intron sick + chr2L_4_19800001 chr2L_19800001 EF39_1-HE 726 chr2L 19837253 19837309 chr2L 19837359 19837426 14 107 3.5 0.0 1.8 5.0 173 chr2L 19837253 intron sick + chr2L 19837340 intron sick + chr2L 19837426 intron sick + chr2L_14_19835001 chr2L_19835001 EF39_1-HE 727 chr2L 19846239 19846277 chr2L 19846346 19846384 17 107 0.0 9.0 4.5 3.1 145 chr2L 19846239 intron sick + chr2L 19846312 intron sick + chr2L 19846384 intron sick + chr2L_17_19845001 chr2L_19845001 EF39_1-HE 728 chr2L 19887776 19887806 chr2L 19887908 19887938 6 132 0.0 7.5 3.8 1.2 162 chr2L 19887776 intron sick + chr2L 19887857 intron sick + chr2L 19887938 intron sick + chr2L_6_19885001 chr2L_19885001 EF39_1-HE 729 chr2L 19890085 19890094 chr2L 19890190 19890199 5 105 2.0 7.0 4.5 0.9 114 chr2L 19890085 intron sick + chr2L 19890142 intron sick + chr2L 19890199 intron sick + chr2L_5_19890001 chr2L_19890001 EF39_1-HE 730 chr2L 19927175 19927231 chr2L 19927514 19927571 9 340 2.5 1.5 2.0 3.0 396 chr2L 19927175 intron sick + chr2L 19927373 intron sick + chr2L 19927571 intron sick + chr2L_9_19925001 chr2L_19925001 EF39_1-HE 731 chr2L 19980663 19980720 chr2L 19980770 19980827 15 107 3.0 3.0 3.0 3.8 164 chr2L 19980663 intron CG43861 - chr2L 19980745 intron CG43861 - chr2L 19980827 intron CG43861 - chr2L_15_19980001 chr2L_19980001 EF39_1-HE 732 chr2L 20005850 20005904 chr2L 20010952 20011006 flea 17 5102 2.5 8.0 5.2 2.7 5156 chr2L 20005850 intron CG43861 - chr2L 20008428 intron CG43861 - chr2L 20011006 intron CG43861 - chr2L_17_20005001 chr2L_20005001 EF39_1-HE 733 chr2L 20041405 20041452 chr2L 20041516 20041563 13 111 6.0 5.5 5.8 1.9 158 chr2L 20041405 intron sNPF + chr2L 20041484 intron sNPF + chr2L 20041563 intron sNPF + chr2L_13_20040001 chr2L_20040001 EF39_1-HE 734 chr2L 20125166 20125193 chr2L 20125268 20125295 8 102 13.0 7.5 10.2 0.7 129 chr2L 20125166 intergenic not near genes chr2L 20125230 intergenic not near genes chr2L 20125295 intergenic not near genes chr2L_8_20125001 chr2L_20125001 EF39_1-HE 735 chr2L 20136414 20136423 chr2L 20136572 20136581 6 158 1.0 5.0 3.0 1.5 167 chr2L 20136414 intergenic not near genes chr2L 20136498 intergenic not near genes chr2L 20136581 intergenic not near genes chr2L_6_20135001 chr2L_20135001 EF39_1-HE 736 chr2L 20257066 20257095 chr2L 20257429 20257458 7 363 1.5 1.0 1.2 3.2 392 chr2L 20257066 5` UTR CG17571 - chr2L 20257262 intergenic CG17571 - chr2L 20257458 intergenic CG17571 - chr2L_7_20255001 chr2L_20255001 EF39_1-HE 737 chr2L 20272087 20272136 chr2L 20282824 20282873 copia 18 10737 2.0 5.5 3.8 3.8 10786 chr2L 20272087 intergenic not near genes chr2L 20277480 intergenic not near genes chr2L 20282873 intergenic not near genes chr2L_18_20275001 chr2L_20275001 EF39_1-HE 738 chr2L 20299975 20300020 chr2L 20300089 20300133 13 107 4.5 7.5 6.0 1.9 158 chr2L 20299975 intergenic not near genes chr2L 20300054 intergenic not near genes chr2L 20300133 intergenic not near genes chr2L_13_20300001 chr2L_20300001 EF39_1-HE 739 chr2L 20303161 20303186 chr2L 20310655 20310680 blood 4 7494 0.0 6.0 3.0 1.0 7519 chr2L 20303161 intergenic not near genes chr2L 20306920 intergenic not near genes chr2L 20310680 intergenic not near genes chr2L_4_20305001 chr2L_20305001 EF39_1-HE 740 chr2L 20320014 20320066 chr2L 20320144 20320207 5 132 8.5 0.5 4.5 0.9 193 chr2L 20320014 intron spir + chr2L 20320110 intron spir + chr2L 20320207 intron spir + chr2L_5_20320001 chr2L_20320001 EF39_1-HE 741 chr2L 20344083 20344128 chr2L 20344197 20344242 16 113 4.5 7.0 5.8 2.4 159 chr2L 20344083 intron spir + chr2L 20344162 intron spir + chr2L 20344242 intron spir + chr2L_16_20340001 chr2L_20340001 EF39_1-HE 742 chr2L 20372198 20372224 chr2L 20372474 20372500 pogo 11 276 2.0 5.0 3.5 2.4 302 chr2L 20372198 intergenic Ugt37a1 - chr2L 20372349 intergenic Ugt37a1 - chr2L 20372500 exon Ugt37a1 - chr2L_11_20370001 chr2L_20370001 EF39_1-HE 743 chr2L 20396780 20396801 chr2L 20396882 20396903 6 102 5.5 0.0 2.8 1.6 123 chr2L 20396780 intron CG10947 - chr2L 20396842 intron CG10947 - chr2L 20396903 intron CG10947 - chr2L_6_20395001 chr2L_20395001 EF39_1-HE 744 chr2L 20421465 20421503 chr2L 20421580 20421616 13 115 2.5 3.0 2.8 3.4 151 chr2L 20421465 intron Arpc2 + chr2L 20421540 intron,5` UTR Arpc2 +,snoRNA:Psi18S-640f + chr2L 20421616 intron,5` UTR Arpc2 +,snoRNA:Psi18S-525i + chr2L_13_20420001 chr2L_20420001 EF39_1-HE 745 chr2L 20438076 20438135 chr2L 20438232 20438291 6 156 1.0 3.5 2.2 1.9 215 chr2L 20438076 intron,intron CG31688 +,CR43607 - chr2L 20438184 intron,intron CG31688 +,CR43607 - chr2L 20438291 intron,intron CG31688 +,CR43607 - chr2L_6_20435001 chr2L_20435001 EF39_1-HE 746 chr2L 20479801 20479855 chr2L 20479913 20479939 16 110 2.5 0.5 1.5 6.4 138 chr2L 20479801 intron CR44980 - chr2L 20479870 intron CR44980 - chr2L 20479939 intron CR44980 - chr2L_16_20475001 chr2L_20475001 EF39_1-HE 747 chr2L 20480853 20480905 chr2L 20480975 20481027 12 122 3.5 4.0 3.8 2.5 174 chr2L 20480853 intron CR44980 - chr2L 20480940 intron CR44980 - chr2L 20481027 intron CR44980 - chr2L_12_20480001 chr2L_20480001 EF39_1-HE 748 chr2L 20498662 20498703 chr2L 20498787 20498828 12 124 5.0 5.5 5.2 1.9 166 chr2L 20498662 intergenic not near genes chr2L 20498745 intergenic not near genes chr2L 20498828 intergenic not near genes chr2L_12_20495001 chr2L_20495001 EF39_1-HE 749 chr2L 20553161 20553209 chr2L 20553263 20553311 17 102 4.5 4.5 4.5 3.1 150 chr2L 20553161 intergenic not near genes chr2L 20553236 intergenic not near genes chr2L 20553311 intergenic not near genes chr2L_17_20550001 chr2L_20550001 EF39_1-HE 750 chr2L 20568639 20568686 chr2L 20569054 20569102 X-element 15 416 4.0 3.0 3.5 3.3 463 chr2L 20568639 intron CR45347 + chr2L 20568870 intron CR45347 + chr2L 20569102 intron CR45347 + chr2L_15_20565001 chr2L_20565001 EF39_1-HE 751 chr2L 20576194 20576252 chr2L 20583688 20583746 blood 12 7493 3.5 2.0 2.8 3.2 7552 chr2L 20576194 intergenic CR45347 + chr2L 20579970 intergenic not near genes chr2L 20583746 3` UTR CR44909 - chr2L_12_20575001 chr2L_20575001 EF39_1-HE 752 chr2L 20639475 20639531 chr2L 20639777 20639833 INE-1 9 302 4.5 5.0 4.8 1.6 358 chr2L 20639475 intergenic not near genes chr2L 20639654 intergenic CG31680 + chr2L 20639833 intergenic CG31680 + chr2L_9_20635001 chr2L_20635001 EF39_1-HE 753 chr2L 20643319 20643337 chr2L 20643477 20643492 5 157 5.5 3.0 4.2 1.0 173 chr2L 20643319 intergenic phr6-4 -,CG17470 - chr2L 20643406 3` UTR phr6-4 - chr2L 20643492 3` UTR phr6-4 - chr2L_5_20640001 chr2L_20640001 EF39_1-HE 754 chr2L 20695769 20695827 chr2L 20695883 20695941 22 114 4.5 2.5 3.5 4.9 172 chr2L 20695769 intron Hr38 - chr2L 20695855 intron Hr38 - chr2L 20695941 intron Hr38 - chr2L_22_20695001 chr2L_20695001 EF39_1-HE 755 chr2L 20726479 20726534 chr2L 20726583 20726638 19 104 3.5 6.0 4.8 3.3 159 chr2L 20726479 5` UTR CG9316 - chr2L 20726558 intergenic CG9316 - chr2L 20726638 intergenic CG9316 - chr2L_19_20725001 chr2L_20725001 EF39_1-HE 756 chr2L 20772364 20772416 chr2L 20772518 20772570 10 153 3.0 2.5 2.8 2.6 206 chr2L 20772364 intron cad + chr2L 20772467 intron cad + chr2L 20772570 intron cad + chr2L_10_20770001 chr2L_20770001 EF39_1-HE 757 chr2L 20783284 20783336 chr2L 20783407 20783459 11 119 4.5 1.5 3.0 2.8 175 chr2L 20783284 intergenic cad + chr2L 20783372 intergenic cad + chr2L 20783459 intergenic cad + chr2L_11_20780001 chr2L_20780001 EF39_1-HE 758 chr2L 20835785 20835840 chr2L 20836528 20836581 Quasimodo 11 742 3.5 5.5 4.5 2.0 796 chr2L 20835785 5` UTR Oseg5 - chr2L 20836183 intergenic Oseg5 -,Spn38F - chr2L 20836581 intergenic Spn38F - chr2L_11_20835001 chr2L_20835001 EF39_1-HE 759 chr2L 20857715 20857771 chr2L 20857814 20857875 11 103 4.0 5.0 4.5 2.0 160 chr2L 20857715 exon CG14400 - chr2L 20857795 exon CG14400 - chr2L 20857875 exon CG14400 - chr2L_11_20855001 chr2L_20855001 EF39_1-HE 760 chr2L 20862584 20862593 chr2L 20862707 20862716 4 123 0.0 3.5 1.8 1.4 132 chr2L 20862584 intergenic not near genes chr2L 20862650 intergenic not near genes chr2L 20862716 intergenic not near genes chr2L_4_20860001 chr2L_20860001 EF39_1-HE 761 chr2L 20891515 20891545 chr2L 20896640 20896672 jockey 9 5127 1.5 5.5 3.5 2.0 5157 chr2L 20891515 intron,intron CG43739 -,sky - chr2L 20894094 intron,intron CG43739 -,sky - chr2L 20896672 intron,intron CG43739 -,sky - chr2L_9_20890001 chr2L_20890001 EF39_1-HE 762 chr2L 20897553 20897600 chr2L 20897664 20897716 14 115 2.5 1.0 1.8 5.0 163 chr2L 20897553 intron,intron CG43739 -,sky - chr2L 20897634 intron,intron CG43739 -,sky - chr2L 20897716 intron,intron CG43739 -,sky - chr2L_14_20895001 chr2L_20895001 EF39_1-HE 763 chr2L 20976637 20976664 chr2L 20981478 20981505 X-element 17 4841 2.5 3.0 2.8 4.5 4868 chr2L 20976637 intron CG42238 - chr2L 20979071 intron CG42238 - chr2L 20981505 intron CG42238 - chr2L_17_20975001 chr2L_20975001 EF39_1-HE 764 chr2L 21004062 21004113 chr2L 21004185 21004204 15 119 6.5 3.0 4.8 2.6 142 chr2L 21004062 intron CG42238 - chr2L 21004133 intron CG42238 - chr2L 21004204 intron CG42238 - chr2L_15_21000001 chr2L_21000001 EF39_1-HE 765 chr2L 21020261 21020301 chr2L 21023964 21024004 NOF 9 3702 3.5 4.0 3.8 1.9 3743 chr2L 21020261 intron CG42238 - chr2L 21022132 intron CG42238 - chr2L 21024004 intron CG42238 - chr2L_9_21020001 chr2L_21020001 EF39_1-HE 766 chr2L 21034119 21034174 chr2L 21034226 21034281 14 107 6.0 7.5 6.8 1.8 162 chr2L 21034119 intron CG42238 - chr2L 21034200 intron CG42238 - chr2L 21034281 intron CG42238 - chr2L_14_21030001 chr2L_21030001 EF39_1-HE 767 chr2L 21152023 21152063 chr2L 21152516 21152556 13 493 7.0 7.0 7.0 1.6 533 chr2L 21152023 intergenic not near genes chr2L 21152290 intergenic not near genes chr2L 21152556 intergenic not near genes chr2L_13_21150001 chr2L_21150001 EF39_1-HE 768 chr2L 21263248 21263305 chr2L 21263366 21263423 15 118 4.0 5.0 4.5 2.7 175 chr2L 21263248 intron CG8671 + chr2L 21263336 intron CG8671 + chr2L 21263423 intron CG8671 + chr2L_15_21260001 chr2L_21260001 EF39_1-HE 769 chr2L 21286599 21286613 chr2L 21286703 21286717 4 104 4.5 3.0 3.8 0.8 118 chr2L 21286599 exon Mio - chr2L 21286658 intron Mio - chr2L 21286717 intron Mio - chr2L_4_21285001 chr2L_21285001 EF39_1-HE 770 chr2L 21307446 21307495 chr2L 21307554 21307603 9 108 2.0 3.0 2.5 2.6 157 chr2L 21307446 intron Mio - chr2L 21307524 intron Mio - chr2L 21307603 intron Mio - chr2L_9_21305001 chr2L_21305001 EF39_1-HE 771 chr2L 21326901 21326956 chr2L 21327004 21327058 16 103 4.0 6.5 5.2 2.6 157 chr2L 21326901 5` UTR CR42696 + chr2L 21326980 5` UTR CR42696 + chr2L 21327058 5` UTR CR42696 + chr2L_16_21325001 chr2L_21325001 EF39_1-HE 772 chr2L 21347528 21347574 chr2L 21355026 21355072 blood 6 7498 3.0 5.0 4.0 1.2 7544 chr2L 21347528 intron Tsp39D + chr2L 21351300 intron Tsp39D + chr2L 21355072 intron Tsp39D + chr2L_6_21350001 chr2L_21350001 EF39_1-HE 773 chr2L 21368514 21368567 chr2L 21368617 21368670 9 103 4.5 1.5 3.0 2.2 156 chr2L 21368514 intron Gr39b - chr2L 21368592 intron Gr39b - chr2L 21368670 intron Gr39b - chr2L_9_21365001 chr2L_21365001 EF39_1-HE 774 chr2L 21597025 21597058 chr2L 21604795 21604828 roo 6 7770 5.0 5.0 5.0 1.0 7803 chr2L 21597025 intergenic not near genes chr2L 21600926 intergenic not near genes chr2L 21604828 intergenic not near genes chr2L_6_21600001 chr2L_21600001 EF39_1-HE 775 chr2L 21607794 21607813 chr2L 21607916 21607935 9 122 6.0 0.0 3.0 2.2 141 chr2L 21607794 intergenic not near genes chr2L 21607864 intergenic not near genes chr2L 21607935 intergenic not near genes chr2L_9_21605001 chr2L_21605001 EF39_1-HE 776 chr2L 21619974 21619999 chr2L 21620086 21620111 4 112 1.5 2.5 2.0 1.3 137 chr2L 21619974 intron CG2201 - chr2L 21620042 intron CG2201 - chr2L 21620111 intron CG2201 - chr2L_4_21620001 chr2L_21620001 EF39_1-HE 777 chr2L 21653171 21653225 chr2L 21656501 21656539 invader4 15 3328 2.5 4.0 3.2 3.6 3368 chr2L 21653171 intergenic not near genes chr2L 21654855 intergenic not near genes chr2L 21656539 intergenic not near genes chr2L_15_21650001 chr2L_21650001 EF39_1-HE 778 chr2L 21691807 21691843 chr2L 21698303 21698340 Burdock 4 6496 5.5 1.0 3.2 1.0 6533 chr2L 21691807 intron CG31619 + chr2L 21695074 intron CG31619 + chr2L 21698340 intron CG31619 + chr2L_4_21695001 chr2L_21695001 EF39_1-HE 779 chr2L 21702676 21702713 chr2L 21702834 21702870 9 158 4.5 5.5 5.0 1.5 194 chr2L 21702676 intron CG31619 + chr2L 21702773 intron CG31619 + chr2L 21702870 intron CG31619 + chr2L_9_21700001 chr2L_21700001 EF39_1-HE 780 chr2L 21747707 21747737 chr2L 21747964 21747994 7 257 2.5 1.0 1.8 2.5 287 chr2L 21747707 intron step - chr2L 21747850 intron step - chr2L 21747994 intron step - chr2L_7_21745001 chr2L_21745001 EF39_1-HE 781 chr2L 21755474 21755522 chr2L 21755624 21755672 11 150 3.5 4.0 3.8 2.3 198 chr2L 21755474 intron step - chr2L 21755573 intron step - chr2L 21755672 intron step - chr2L_11_21755001 chr2L_21755001 EF39_1-HE 782 chr2L 21811190 21811238 chr2L 21811294 21811342 15 104 0.5 2.0 1.2 6.8 152 chr2L 21811190 intergenic not near genes chr2L 21811266 intergenic not near genes chr2L 21811342 intergenic not near genes chr2L_15_21810001 chr2L_21810001 EF39_1-HE 783 chr2L 21819232 21819279 chr2L 21819417 21819464 17 184 1.5 4.5 3.0 4.2 232 chr2L 21819232 intergenic CR44786 + chr2L 21819348 intergenic CR44786 + chr2L 21819464 intergenic CR44786 + chr2L_17_21815001 chr2L_21815001 EF39_1-HE 784 chr2L 21859299 21859346 chr2L 21859405 21859452 15 105 3.5 9.5 6.5 2.0 153 chr2L 21859299 intron CR44917 + chr2L 21859376 intron CR44917 + chr2L 21859452 intron CR44917 + chr2L_15_21855001 chr2L_21855001 EF39_1-HE 785 chr2L 21933905 21933924 chr2L 21934012 21934031 6 107 6.0 7.5 6.8 0.8 126 chr2L 21933905 intergenic not near genes chr2L 21933968 intergenic not near genes chr2L 21934031 intergenic not near genes chr2L_6_21930001 chr2L_21930001 EF39_1-HE 786 chr2L 21963754 21963807 chr2L 21963858 21963911 20 104 5.0 5.5 5.2 3.2 157 chr2L 21963754 intergenic not near genes chr2L 21963832 intergenic not near genes chr2L 21963911 intergenic not near genes chr2L_20_21960001 chr2L_21960001 EF39_1-HE 787 chr2L 21981662 21981708 chr2L 21990853 21990898 roo 11 9191 2.0 2.0 2.0 3.7 9236 chr2L 21981662 exon CG2528 - chr2L 21986280 intron CG2528 - chr2L 21990898 exon CG2528 - chr2L_11_21985001 chr2L_21985001 EF39_1-HE 788 chr2L 21994518 21994565 chr2L 21994639 21994686 14 121 2.0 2.5 2.2 4.4 168 chr2L 21994518 intergenic not near genes chr2L 21994602 intergenic not near genes chr2L 21994686 intergenic not near genes chr2L_14_21990001 chr2L_21990001 EF39_1-HE 789 chr2L 22001620 22001673 chr2L 22001722 22001775 13 102 2.0 2.5 2.2 4.1 155 chr2L 22001620 intergenic not near genes chr2L 22001698 intergenic not near genes chr2L 22001775 intergenic not near genes chr2L_13_22000001 chr2L_22000001 EF39_1-HE 790 chr2L 22011892 22011949 chr2L 22011999 22012056 18 107 3.0 6.0 4.5 3.3 164 chr2L 22011892 intergenic not near genes chr2L 22011974 intergenic not near genes chr2L 22012056 intergenic not near genes chr2L_18_22010001 chr2L_22010001 EF39_1-HE 791 chr2L 22028572 22028601 chr2L 22028683 22028712 4 111 7.0 5.0 6.0 0.6 140 chr2L 22028572 intergenic not near genes chr2L 22028642 intergenic not near genes chr2L 22028712 intergenic not near genes chr2L_4_22025001 chr2L_22025001 EF39_1-HE 792 chr2L 22047230 22047256 chr2L 22047381 22047407 5 151 5.0 5.0 5.0 0.8 177 chr2L 22047230 intergenic not near genes chr2L 22047318 intergenic not near genes chr2L 22047407 intergenic not near genes chr2L_5_22045001 chr2L_22045001 EF39_1-HE 793 chr2L 22165514 22165541 chr2L 22165625 22165652 5 111 1.5 4.0 2.8 1.3 138 chr2L 22165514 3` UTR CG42748 + chr2L 22165583 3` UTR CG42748 + chr2L 22165652 3` UTR CG42748 + chr2L_5_22165001 chr2L_22165001 EF39_1-HE 794 chr2L 22187427 22187443 chr2L 22187561 22187577 5 134 2.0 4.5 3.2 1.2 150 chr2L 22187427 intergenic not near genes chr2L 22187502 intergenic not near genes chr2L 22187577 intergenic not near genes chr2L_5_22185001 chr2L_22185001 EF39_1-HE 795 chr2L 22191997 22192055 chr2L 22192112 22192170 19 115 2.0 4.0 3.0 4.8 173 chr2L 22191997 intron Ir40a - chr2L 22192084 intron Ir40a - chr2L 22192170 intron Ir40a - chr2L_19_22190001 chr2L_22190001 EF39_1-HE 796 chr2L 22195162 22195213 chr2L 22195269 22195320 12 107 5.0 6.0 5.5 1.8 158 chr2L 22195162 intron Ir40a - chr2L 22195241 intron Ir40a - chr2L 22195320 intron Ir40a - chr2L_12_22195001 chr2L_22195001 EF39_1-HE 797 chr2L 22197860 22197899 chr2L 22198085 22198124 11 225 3.5 1.0 2.2 3.4 264 chr2L 22197860 intron Ir40a - chr2L 22197992 intron Ir40a - chr2L 22198124 intron Ir40a - chr2L_11_22195001 chr2L_22195001 EF39_1-HE 798 chr2L 22212111 22212158 chr2L 22212684 22212731 17 573 2.5 4.5 3.5 3.8 620 chr2L 22212111 intron Ir40a - chr2L 22212421 intron Ir40a - chr2L 22212731 exon Ir40a - chr2L_17_22210001 chr2L_22210001 EF39_1-HE 799 chr2L 22215883 22215931 chr2L 22215995 22216043 27 112 8.0 7.0 7.5 3.2 160 chr2L 22215883 intergenic not near genes chr2L 22215963 intergenic not near genes chr2L 22216043 intergenic not near genes chr2L_27_22215001 chr2L_22215001 EF39_1-HE 800 chr2L 22258589 22258634 chr2L 22260740 22260785 G6 10 2151 3.5 6.0 4.8 1.7 2196 chr2L 22258589 intergenic Tif-IA + chr2L 22259687 intergenic not near genes chr2L 22260785 intergenic not near genes chr2L_10_22255001 chr2L_22255001 EF39_1-HE 801 chr2L 22641822 22641872 chr2L 22641953 22642003 24 131 10.0 10.5 10.2 2.1 181 chr2L 22641822 intron CG40006 - chr2L 22641912 intron CG40006 - chr2L 22642003 intron CG40006 - chr2L_24_22640001 chr2L_22640001 EF39_1-HE 802 chr2L 22679801 22679810 chr2L 22684599 22684608 F-element 4 4798 3.0 3.5 3.2 1.0 4807 chr2L 22679801 intron CG40006 - chr2L 22682204 intron CG40006 - chr2L 22684608 intron CG40006 - chr2L_4_22680001 chr2L_22680001 EF39_1-HE 803 chr2L 22692459 22692477 chr2L 22692600 22692618 7 141 2.0 6.0 4.0 1.4 159 chr2L 22692459 intron CG40006 - chr2L 22692538 intron CG40006 - chr2L 22692618 intron CG40006 - chr2L_7_22690001 chr2L_22690001 EF39_1-HE 804 chr2L 22692481 22692501 chr2L 22692591 22692642 8 137 1.5 4.5 3.0 2.0 161 chr2L 22692481 intron CG40006 - chr2L 22692562 intron CG40006 - chr2L 22692642 intron CG40006 - chr2L_8_22690001 chr2L_22690001 EF39_1-HE 805 chr2L 22727604 22727634 chr2L 22727764 22727794 8 160 2.0 1.5 1.8 2.9 190 chr2L 22727604 intron CG40006 - chr2L 22727699 intron CG40006 - chr2L 22727794 intron CG40006 - chr2L_8_22725001 chr2L_22725001 EF39_1-HE 806 chr2L 22776418 22776451 chr2L 22778233 22778266 S-element 10 1815 1.0 5.5 3.2 2.4 1848 chr2L 22776418 intergenic not near genes chr2L 22777342 intergenic not near genes chr2L 22778266 intergenic not near genes chr2L_10_22775001 chr2L_22775001 EF39_1-HE 807 chr2L 23072395 23072451 chr2L 23072496 23072552 13 100 1.0 2.0 1.5 5.2 157 chr2L 23072395 intergenic not near genes chr2L 23072474 intergenic not near genes chr2L 23072552 intergenic not near genes chr2L_13_23070001 chr2L_23070001 EF39_1-HE 808 chr2R 469956 469980 chr2R 473199 473247 F-element 11 3265 5.0 4.5 4.8 1.9 3291 chr2R 469956 intergenic not near genes chr2R 471602 intergenic not near genes chr2R 473247 intergenic not near genes chr2R_11_470001 chr2R_470001 EF39_1-HE 809 chr2R 552732 552778 chr2R 553975 554022 1360 17 1242 5.0 8.5 6.8 2.2 1290 chr2R 552732 intron CG40378 + chr2R 553377 intron CG40378 + chr2R 554022 intron CG40378 + chr2R_17_550001 chr2R_550001 EF39_1-HE 810 chr2R 675264 675317 chr2R 675406 675444 25 140 8.0 5.5 6.8 3.2 180 chr2R 675264 intron CG43676 + chr2R 675354 intron CG43676 + chr2R 675444 intron CG43676 + chr2R_25_675001 chr2R_675001 EF39_1-HE 811 chr2R 1340583 1340588 chr2R 1340873 1340878 4 290 11.5 12.5 12.0 0.3 295 chr2R 1340583 intergenic not near genes chr2R 1340730 intergenic not near genes chr2R 1340878 intergenic not near genes chr2R_4_1340001 chr2R_1340001 EF39_1-HE 812 chr2R 1365749 1365891 chr2R 1365888 1366029 6 146 0.0 0.0 0.0 6.0 280 chr2R 1365749 intron l(2)41Ab + chr2R 1365889 intron l(2)41Ab + chr2R 1366029 intron l(2)41Ab + chr2R_6_1365001 chr2R_1365001 EF39_1-HE 813 chr2R 2015113 2015165 chr2R 2015216 2015267 13 103 3.5 2.0 2.8 3.4 154 chr2R 2015113 intron CG17684 - chr2R 2015190 intron CG17684 - chr2R 2015267 intron CG17684 - chr2R_13_2015001 chr2R_2015001 EF39_1-HE 814 chr2R 2048591 2048596 chr2R 2048700 2048704 4 109 13.5 6.5 10.0 0.4 113 chr2R 2048591 intron CG17684 - chr2R 2048648 intron CG17684 - chr2R 2048704 intron CG17684 - chr2R_4_2045001 chr2R_2045001 EF39_1-HE 815 chr2R 2048599 2048637 chr2R 2048699 2048717 8 102 8.5 6.5 7.5 0.9 118 chr2R 2048599 intron CG17684 - chr2R 2048658 intron CG17684 - chr2R 2048717 intron CG17684 - chr2R_8_2045001 chr2R_2045001 EF39_1-HE 816 chr2R 2110482 2110496 chr2R 2118066 2118080 17.6 8 7584 17.5 8.0 12.8 0.6 7598 chr2R 2110482 intron CG17684 - chr2R 2114281 intron CG17684 - chr2R 2118080 intron CG17684 - chr2R_8_2110001 chr2R_2110001 EF39_1-HE 817 chr2R 2498963 2499014 chr2R 2508136 2508183 roo 11 9172 0.5 1.5 1.0 5.5 9220 chr2R 2498963 intron MFS17 - chr2R 2503573 intron MFS17 - chr2R 2508183 intron MFS17 - chr2R_11_2500001 chr2R_2500001 EF39_1-HE 818 chr2R 2527619 2527650 chr2R 2527730 2527761 7 111 4.0 3.0 3.5 1.6 142 chr2R 2527619 intron MFS17 - chr2R 2527690 intron MFS17 - chr2R 2527761 intron MFS17 - chr2R_7_2525001 chr2R_2525001 EF39_1-HE 819 chr2R 2942267 2942313 chr2R 2942395 2942441 18 128 3.5 3.5 3.5 4.0 174 chr2R 2942267 intron Scp1 - chr2R 2942354 intron Scp1 - chr2R 2942441 intron Scp1 - chr2R_18_2940001 chr2R_2940001 EF39_1-HE 820 chr2R 2943108 2943127 chr2R 2943246 2943265 4 138 1.0 8.5 4.8 0.7 157 chr2R 2943108 intron Scp1 - chr2R 2943186 intron Scp1 - chr2R 2943265 intron Scp1 - chr2R_4_2940001 chr2R_2940001 EF39_1-HE 821 chr2R 2944276 2944330 chr2R 2944899 2944952 21 623 5.0 5.5 5.2 3.4 676 chr2R 2944276 intron Scp1 - chr2R 2944614 intron Scp1 - chr2R 2944952 intron Scp1 - chr2R_21_2940001 chr2R_2940001 EF39_1-HE 822 chr2R 2944951 2944968 chr2R 2945056 2945076 7 107 9.5 5.0 7.2 0.9 125 chr2R 2944951 intron Scp1 - chr2R 2945014 intron Scp1 - chr2R 2945076 intron Scp1 - chr2R_7_2945001 chr2R_2945001 EF39_1-HE 823 chr2R 2944969 2945004 chr2R 2945053 2945112 13 106 3.5 5.0 4.2 2.5 143 chr2R 2944969 intron Scp1 - chr2R 2945040 intron Scp1 - chr2R 2945112 intron Scp1 - chr2R_13_2945001 chr2R_2945001 EF39_1-HE 824 chr2R 2950412 2950466 chr2R 2950560 2950608 11 147 3.5 6.5 5.0 1.8 196 chr2R 2950412 intron Scp1 - chr2R 2950510 intron Scp1 - chr2R 2950608 intron Scp1 - chr2R_11_2950001 chr2R_2950001 EF39_1-HE 825 chr2R 3144069 3144100 chr2R 3393373 3393404 Doc 4 249304 17.5 2.5 10.0 0.4 249335 chr2R 3144069 intron CG42596 + chr2R 3268736 intergenic not near genes chr2R 3393404 intergenic not near genes chr2R_4_3265001 chr2R_3265001 EF39_1-HE 826 chr2R 3291828 3292098 chr2R 3915028 3915285 4 623194 26.0 11.5 18.8 0.2 623457 chr2R 3291828 intergenic not near genes chr2R 3603556 intergenic not near genes chr2R 3915285 intron uex - chr2R_4_3600001 chr2R_3600001 EF39_1-HE 827 chr2R 3702643 3702666 chr2R 3702764 3702787 6 121 6.5 5.0 5.8 0.9 144 chr2R 3702643 intergenic not near genes chr2R 3702715 intergenic not near genes chr2R 3702787 intergenic not near genes chr2R_6_3700001 chr2R_3700001 EF39_1-HE 828 chr2R 469859 469862 chr2R 4141694 4141697 4 3671835 13.0 20.5 16.8 0.2 3671838 chr2R 469859 intergenic not near genes chr2R 2305778 intergenic not near genes chr2R 4141697 intergenic not near genes chr2R_4_2305001 chr2R_2305001 EF39_1-HE 829 chr2R 4312931 4312978 chr2R 4313041 4313088 7 110 2.0 1.0 1.5 2.8 157 chr2R 4312931 intergenic not near genes chr2R 4313010 intergenic not near genes chr2R 4313088 intergenic not near genes chr2R_7_4310001 chr2R_4310001 EF39_1-HE 830 chr2R 4351438 4351489 chr2R 4351547 4351598 20 109 3.5 7.0 5.2 3.2 160 chr2R 4351438 intron Gprk1 - chr2R 4351518 intron Gprk1 - chr2R 4351598 intron Gprk1 - chr2R_20_4350001 chr2R_4350001 EF39_1-HE 831 chr2R 4657863 4657903 chr2R 4657967 4658006 4 102 4.0 4.0 4.0 0.8 143 chr2R 4657863 intergenic not near genes chr2R 4657934 intergenic not near genes chr2R 4658006 intergenic not near genes chr2R_4_4655001 chr2R_4655001 EF39_1-HE 832 chr2R 4688107 4688131 chr2R 4688226 4688250 5 117 1.5 2.5 2.0 1.7 143 chr2R 4688107 intergenic not near genes chr2R 4688178 intergenic not near genes chr2R 4688250 intergenic not near genes chr2R_5_4685001 chr2R_4685001 EF39_1-HE 833 chr2R 4730793 4730815 chr2R 4731211 4731233 13 417 13.0 6.0 9.5 1.2 440 chr2R 4730793 intron CR45471 + chr2R 4731013 5` UTR CR45471 + chr2R 4731233 5` UTR CR45471 + chr2R_13_4730001 chr2R_4730001 EF39_1-HE 834 chr2R 4783392 4783447 chr2R 4783496 4783551 9 104 2.0 2.5 2.2 2.8 159 chr2R 4783392 intergenic not near genes chr2R 4783472 intergenic not near genes chr2R 4783551 intergenic not near genes chr2R_9_4780001 chr2R_4780001 EF39_1-HE 835 chr2R 4838853 4838902 chr2R 4840402 4840451 transib2 9 1549 3.0 5.5 4.2 1.7 1598 chr2R 4838853 intergenic not near genes chr2R 4839652 intergenic not near genes chr2R 4840451 intergenic not near genes chr2R_9_4835001 chr2R_4835001 EF39_1-HE 836 chr2R 4870717 4870726 chr2R 4871254 4871263 R1A1-element 4 537 7.5 3.5 5.5 0.6 546 chr2R 4870717 intergenic not near genes chr2R 4870990 intergenic not near genes chr2R 4871263 intergenic not near genes chr2R_4_4870001 chr2R_4870001 EF39_1-HE 837 chr2R 4887596 4887648 chr2R 4887818 4887870 13 222 3.0 7.0 5.0 2.2 274 chr2R 4887596 intergenic not near genes chr2R 4887733 intergenic not near genes chr2R 4887870 intergenic not near genes chr2R_13_4885001 chr2R_4885001 EF39_1-HE 838 chr2R 4888578 4888592 chr2R 4888691 4888705 8 113 8.5 4.0 6.2 1.1 127 chr2R 4888578 intergenic not near genes chr2R 4888642 intergenic not near genes chr2R 4888705 intergenic not near genes chr2R_8_4885001 chr2R_4885001 EF39_1-HE 839 chr2R 4957005 4957046 chr2R 4957122 4957175 7 127 2.5 4.0 3.2 1.7 170 chr2R 4957005 intron Ir41a + chr2R 4957090 intron Ir41a + chr2R 4957175 intron Ir41a + chr2R_7_4955001 chr2R_4955001 EF39_1-HE 840 chr2R 5009115 5009174 chr2R 5009382 5009441 10 266 2.5 1.5 2.0 3.3 326 chr2R 5009115 intron Ir41a + chr2R 5009278 intron Ir41a + chr2R 5009441 intron Ir41a + chr2R_10_5005001 chr2R_5005001 EF39_1-HE 841 chr2R 5019252 5019304 chr2R 5019364 5019416 14 112 2.5 3.0 2.8 3.7 164 chr2R 5019252 intron Ir41a + chr2R 5019334 intron Ir41a + chr2R 5019416 intron Ir41a + chr2R_14_5015001 chr2R_5015001 EF39_1-HE 842 chr2R 5139677 5139712 chr2R 5139784 5139819 11 106 3.0 1.0 2.0 3.7 142 chr2R 5139677 intergenic not near genes chr2R 5139748 intergenic not near genes chr2R 5139819 intergenic not near genes chr2R_11_5135001 chr2R_5135001 EF39_1-HE 843 chr2R 5180113 5180122 chr2R 5180242 5180251 5 129 6.0 0.0 3.0 1.2 138 chr2R 5180113 intron Nipped-A - chr2R 5180182 intron Nipped-A - chr2R 5180251 intron Nipped-A - chr2R_5_5180001 chr2R_5180001 EF39_1-HE 844 chr2R 5254559 5254609 chr2R 5254665 5254715 9 106 2.5 2.5 2.5 2.6 156 chr2R 5254559 5` UTR CR41443 + chr2R 5254637 5` UTR CR41443 + chr2R 5254715 5` UTR CR41443 + chr2R_9_5250001 chr2R_5250001 EF39_1-HE 845 chr2R 5267408 5267450 chr2R 5267512 5267558 9 107 2.5 2.0 2.2 2.8 150 chr2R 5267408 intron d4 + chr2R 5267483 intron d4 + chr2R 5267558 intron d4 + chr2R_9_5265001 chr2R_5265001 EF39_1-HE 846 chr2R 5364324 5364375 chr2R 5364644 5364681 7 317 3.0 6.5 4.8 1.2 357 chr2R 5364324 5` UTR CR42646 + chr2R 5364502 5` UTR CR42646 + chr2R 5364681 5` UTR CR42646 + chr2R_7_5360001 chr2R_5360001 EF39_1-HE 847 chr2R 5396231 5396285 chr2R 5396495 5396549 12 264 1.0 4.5 2.8 3.2 318 chr2R 5396231 intergenic not near genes chr2R 5396390 intergenic not near genes chr2R 5396549 intergenic not near genes chr2R_12_5395001 chr2R_5395001 EF39_1-HE 848 chr2R 5410290 5410340 chr2R 5410471 5410521 9 181 2.5 2.0 2.2 2.8 231 chr2R 5410290 intergenic not near genes chr2R 5410406 intergenic not near genes chr2R 5410521 intergenic not near genes chr2R_9_5410001 chr2R_5410001 EF39_1-HE 849 chr2R 5417970 5418023 chr2R 5420628 5420680 Burdock 12 2658 4.5 2.0 3.2 2.9 2710 chr2R 5417970 intron laccase2 + chr2R 5419325 intron laccase2 + chr2R 5420680 intron laccase2 + chr2R_12_5415001 chr2R_5415001 EF39_1-HE 850 chr2R 5437653 5437692 chr2R 5437757 5437796 9 104 3.5 4.0 3.8 1.9 143 chr2R 5437653 intron laccase2 + chr2R 5437724 intron laccase2 + chr2R 5437796 intron laccase2 + chr2R_9_5435001 chr2R_5435001 EF39_1-HE 851 chr2R 5472339 5472381 chr2R 5472460 5472502 11 118 2.5 2.0 2.2 3.4 163 chr2R 5472339 intron CG30440 - chr2R 5472420 intron CG30440 - chr2R 5472502 intron CG30440 - chr2R_11_5470001 chr2R_5470001 EF39_1-HE 852 chr2R 5473340 5473399 chr2R 5473461 5473520 8 121 5.5 2.0 3.8 1.7 180 chr2R 5473340 intron CG30440 - chr2R 5473430 intron CG30440 - chr2R 5473520 intron CG30440 - chr2R_8_5470001 chr2R_5470001 EF39_1-HE 853 chr2R 5474669 5474724 chr2R 5474823 5474878 13 154 3.5 3.5 3.5 2.9 209 chr2R 5474669 exon CG30440 - chr2R 5474774 exon CG30440 - chr2R 5474878 exon CG30440 - chr2R_13_5470001 chr2R_5470001 EF39_1-HE 854 chr2R 5475569 5475624 chr2R 5475689 5475744 10 120 1.0 1.0 1.0 5.0 175 chr2R 5475569 intron CG30440 - chr2R 5475656 intron CG30440 - chr2R 5475744 intron CG30440 - chr2R_10_5475001 chr2R_5475001 EF39_1-HE 855 chr2R 5485335 5485368 chr2R 5485517 5485550 8 182 5.5 3.5 4.5 1.5 215 chr2R 5485335 intron CG30440 - chr2R 5485442 intron CG30440 - chr2R 5485550 intron CG30440 - chr2R_8_5485001 chr2R_5485001 EF39_1-HE 856 chr2R 5581401 5581418 chr2R 5627636 5627653 11 46235 4.5 10.5 7.5 1.3 46252 chr2R 5581401 intergenic not near genes chr2R 5604527 intron Fis1 - chr2R 5627653 intergenic not near genes chr2R_11_5600001 chr2R_5600001 EF39_1-HE 857 chr2R 5663904 5663947 chr2R 5664513 5664556 7 609 2.5 4.0 3.2 1.7 652 chr2R 5663904 intergenic CR45472 + chr2R 5664230 5` UTR CR45472 + chr2R 5664556 intron CR45472 + chr2R_7_5660001 chr2R_5660001 EF39_1-HE 858 chr2R 5682380 5682437 chr2R 5682486 5682543 14 106 1.5 2.0 1.8 5.0 163 chr2R 5682380 intron scaf - chr2R 5682462 intron scaf - chr2R 5682543 intron scaf - chr2R_14_5680001 chr2R_5680001 EF39_1-HE 859 chr2R 5727895 5727951 chr2R 5728000 5728056 18 104 2.0 5.5 3.8 3.8 161 chr2R 5727895 intergenic not near genes chr2R 5727976 intergenic not near genes chr2R 5728056 intergenic not near genes chr2R_18_5725001 chr2R_5725001 EF39_1-HE 860 chr2R 5750423 5750451 chr2R 5750541 5750569 7 118 7.0 4.0 5.5 1.1 146 chr2R 5750423 intergenic not near genes chr2R 5750496 intergenic not near genes chr2R 5750569 intergenic not near genes chr2R_7_5750001 chr2R_5750001 EF39_1-HE 861 chr2R 5869260 5869300 chr2R 5874352 5874402 flea 10 5100 5.0 4.0 4.5 1.8 5142 chr2R 5869260 intergenic not near genes chr2R 5871831 intergenic not near genes chr2R 5874402 intergenic not near genes chr2R_10_5870001 chr2R_5870001 EF39_1-HE 862 chr2R 5885342 5885376 chr2R 5885497 5885531 5 155 4.0 3.5 3.8 1.0 189 chr2R 5885342 5` UTR CR44125 + chr2R 5885436 5` UTR CR44125 + chr2R 5885531 5` UTR CR44125 + chr2R_5_5885001 chr2R_5885001 EF39_1-HE 863 chr2R 5896980 5897033 chr2R 5897092 5897145 21 112 7.5 5.0 6.2 2.9 165 chr2R 5896980 intron CG43366 + chr2R 5897062 intron CG43366 + chr2R 5897145 intron CG43366 + chr2R_21_5895001 chr2R_5895001 EF39_1-HE 864 chr2R 5899586 5899623 chr2R 5899714 5899750 25 126 9.0 7.5 8.2 2.7 164 chr2R 5899586 intron CG43366 + chr2R 5899668 intron CG43366 + chr2R 5899750 intron CG43366 + chr2R_25_5895001 chr2R_5895001 EF39_1-HE 865 chr2R 5899624 5899638 chr2R 5899713 5899766 13 124 7.0 7.5 7.2 1.6 142 chr2R 5899624 intron CG43366 + chr2R 5899695 intron CG43366 + chr2R 5899766 intron CG43366 + chr2R_13_5895001 chr2R_5895001 EF39_1-HE 866 chr2R 5902140 5902161 chr2R 5909725 5909746 17.6 6 7585 8.0 3.0 5.5 0.9 7606 chr2R 5902140 intron CG43366 + chr2R 5905943 intron CG43366 + chr2R 5909746 intron CG43366 + chr2R_6_5905001 chr2R_5905001 EF39_1-HE 867 chr2R 5973082 5973135 chr2R 5973195 5973225 12 111 2.5 3.0 2.8 3.2 143 chr2R 5973082 exon BubR1 - chr2R 5973154 intron BubR1 - chr2R 5973225 intron BubR1 - chr2R_12_5970001 chr2R_5970001 EF39_1-HE 868 chr2R 6013658 6013681 chr2R 6013750 6013794 4 108 4.5 2.0 3.2 1.0 136 chr2R 6013658 intergenic Act42A - chr2R 6013726 intergenic Act42A - chr2R 6013794 intergenic Act42A - chr2R_4_6010001 chr2R_6010001 EF39_1-HE 869 chr2R 6015718 6015750 chr2R 6015825 6015857 4 107 2.5 3.5 3.0 1.0 139 chr2R 6015718 intergenic Act42A - chr2R 6015788 intergenic Act42A - chr2R 6015857 intergenic Act42A - chr2R_4_6015001 chr2R_6015001 EF39_1-HE 870 chr2R 6033422 6033475 chr2R 6033528 6033586 17 110 4.0 4.5 4.2 3.3 164 chr2R 6033422 intron SCAP - chr2R 6033504 intron SCAP - chr2R 6033586 intron SCAP - chr2R_17_6030001 chr2R_6030001 EF39_1-HE 871 chr2R 6042124 6042174 chr2R 6042332 6042382 10 208 3.0 1.5 2.2 3.1 258 chr2R 6042124 intergenic Tbce + chr2R 6042253 intergenic Tbce + chr2R 6042382 intergenic Tbce + chr2R_10_6040001 chr2R_6040001 EF39_1-HE 872 chr2R 6050281 6050337 chr2R 6050400 6050452 7 117 2.0 0.0 1.0 3.5 171 chr2R 6050281 5` UTR CG34212 - chr2R 6050366 intergenic CG34212 - chr2R 6050452 intergenic CG34212 -,CCHa2-R + chr2R_7_6050001 chr2R_6050001 EF39_1-HE 873 chr2R 6088345 6088389 chr2R 6088464 6088508 12 119 3.5 2.5 3.0 3.0 163 chr2R 6088345 intergenic not near genes chr2R 6088426 intergenic not near genes chr2R 6088508 intergenic not near genes chr2R_12_6085001 chr2R_6085001 EF39_1-HE 874 chr2R 6096699 6096741 chr2R 6101923 6101965 BS 8 5224 4.0 1.5 2.8 2.1 5266 chr2R 6096699 intron EcR - chr2R 6099332 intron EcR - chr2R 6101965 intron EcR - chr2R_8_6095001 chr2R_6095001 EF39_1-HE 875 chr2R 6108763 6108800 chr2R 6108869 6108906 20 106 10.5 8.0 9.2 2.0 143 chr2R 6108763 intron EcR - chr2R 6108834 intron EcR - chr2R 6108906 intron EcR - chr2R_20_6105001 chr2R_6105001 EF39_1-HE 876 chr2R 6108801 6108812 chr2R 6108868 6108918 6 98 7.5 8.0 7.8 0.7 117 chr2R 6108801 intron EcR - chr2R 6108860 intron EcR - chr2R 6108918 intron EcR - chr2R_6_6105001 chr2R_6105001 EF39_1-HE 877 chr2R 6173525 6173564 chr2R 6173629 6173668 7 104 4.0 3.0 3.5 1.6 143 chr2R 6173525 intergenic Cyp6w1 + chr2R 6173596 intergenic Cyp6w1 + chr2R 6173668 intergenic Cyp6w1 + chr2R_7_6170001 chr2R_6170001 EF39_1-HE 878 chr2R 6178095 6178138 chr2R 6178247 6178290 8 152 1.5 0.5 1.0 4.0 195 chr2R 6178095 intergenic not near genes chr2R 6178192 intergenic not near genes chr2R 6178290 intergenic not near genes chr2R_8_6175001 chr2R_6175001 EF39_1-HE 879 chr2R 6194659 6194683 chr2R 6194768 6194792 7 108 8.0 3.5 5.8 1.0 133 chr2R 6194659 intron Ptr - chr2R 6194726 intron Ptr - chr2R 6194792 intron Ptr - chr2R_7_6190001 chr2R_6190001 EF39_1-HE 880 chr2R 6206768 6206798 chr2R 6206870 6206900 7 102 2.0 1.5 1.8 2.5 132 chr2R 6206768 intergenic CG17994 - chr2R 6206834 intergenic CG17994 - chr2R 6206900 intergenic CG17994 - chr2R_7_6205001 chr2R_6205001 EF39_1-HE 881 chr2R 6223020 6223046 chr2R 6223284 6223310 5 264 3.5 2.5 3.0 1.2 290 chr2R 6223020 intron bin3 + chr2R 6223165 intron bin3 + chr2R 6223310 intron bin3 + chr2R_5_6220001 chr2R_6220001 EF39_1-HE 882 chr2R 6251836 6251872 chr2R 6251938 6251974 18 102 6.0 5.0 5.5 2.8 138 chr2R 6251836 exon Pld + chr2R 6251905 intron Pld + chr2R 6251974 exon Pld + chr2R_18_6250001 chr2R_6250001 EF39_1-HE 883 chr2R 6493473 6493508 chr2R 6493642 6493679 10 171 4.0 9.5 6.8 1.3 206 chr2R 6493473 intergenic not near genes chr2R 6493576 intergenic not near genes chr2R 6493679 intergenic not near genes chr2R_10_6490001 chr2R_6490001 EF39_1-HE 884 chr2R 6494513 6494542 chr2R 6499301 6499330 F-element 4 4788 4.0 1.0 2.5 1.1 4817 chr2R 6494513 intergenic not near genes chr2R 6496922 intergenic not near genes chr2R 6499330 intergenic not near genes chr2R_4_6495001 chr2R_6495001 EF39_1-HE 885 chr2R 6519220 6519266 chr2R 6519329 6519375 9 109 5.0 3.0 4.0 1.8 155 chr2R 6519220 intron jing + chr2R 6519298 intron jing + chr2R 6519375 intron jing + chr2R_9_6515001 chr2R_6515001 EF39_1-HE 886 chr2R 6539795 6539854 chr2R 6539945 6539995 6 142 2.5 0.5 1.5 2.4 200 chr2R 6539795 intron jing + chr2R 6539895 intron jing + chr2R 6539995 intron jing + chr2R_6_6535001 chr2R_6535001 EF39_1-HE 887 chr2R 6579751 6579806 chr2R 6584863 6584902 flea 6 5109 1.5 4.5 3.0 1.5 5151 chr2R 6579751 intron jing + chr2R 6582326 intron jing + chr2R 6584902 intron jing + chr2R_6_6580001 chr2R_6580001 EF39_1-HE 888 chr2R 6712560 6712593 chr2R 6712683 6712716 13 123 5.5 4.5 5.0 2.2 156 chr2R 6712560 intron,intron CG3409 -,CG45092 - chr2R 6712638 intron,intron CG3409 -,CG45092 - chr2R 6712716 intron,intron CG3409 -,CG45092 - chr2R_13_6710001 chr2R_6710001 EF39_1-HE 889 chr2R 6911358 6911398 chr2R 6911475 6911516 12 116 6.0 1.0 3.5 2.7 158 chr2R 6911358 intron CG30158 + chr2R 6911437 intron CG30158 + chr2R 6911516 intron CG30158 + chr2R_12_6910001 chr2R_6910001 EF39_1-HE 890 chr2R 6940941 6940990 chr2R 6941049 6941098 20 108 4.0 3.5 3.8 4.2 157 chr2R 6940941 intron mim - chr2R 6941020 intron mim - chr2R 6941098 intron mim - chr2R_20_6940001 chr2R_6940001 EF39_1-HE 891 chr2R 6952147 6952178 chr2R 6959753 6959784 opus 10 7606 6.5 2.5 4.5 1.8 7637 chr2R 6952147 intron,intron,exon mim -,CheB42c -,ppk25 + chr2R 6955966 intron,intron mim -,CheB42c - chr2R 6959784 intron,intron mim -,CheB42c - chr2R_10_6955001 chr2R_6955001 EF39_1-HE 892 chr2R 6964273 6964316 chr2R 6964376 6964419 8 103 3.5 5.0 4.2 1.5 146 chr2R 6964273 intron,intron mim -,CheB42c - chr2R 6964346 intron,intron mim -,CheB42c - chr2R 6964419 intron,intron mim -,CheB42c - chr2R_8_6960001 chr2R_6960001 EF39_1-HE 893 chr2R 7067598 7067604 chr2R 7067708 7067714 5 110 1.5 4.0 2.8 1.3 116 chr2R 7067598 intergenic not near genes chr2R 7067656 intergenic not near genes chr2R 7067714 intergenic not near genes chr2R_5_7065001 chr2R_7065001 EF39_1-HE 894 chr2R 7068779 7068835 chr2R 7069194 7069250 11 414 1.0 4.0 2.5 3.1 471 chr2R 7068779 intron CG12836 + chr2R 7069014 intron CG12836 + chr2R 7069250 exon CG12836 + chr2R_11_7065001 chr2R_7065001 EF39_1-HE 895 chr2R 7180983 7181000 chr2R 7181083 7181102 5 102 6.5 0.0 3.2 1.2 119 chr2R 7180983 intron pk + chr2R 7181042 intron pk + chr2R 7181102 intron pk + chr2R_5_7180001 chr2R_7180001 EF39_1-HE 896 chr2R 7208778 7208831 chr2R 7208919 7208972 13 141 2.0 3.5 2.8 3.4 194 chr2R 7208778 intron pk + chr2R 7208875 intron pk + chr2R 7208972 intron pk + chr2R_13_7205001 chr2R_7205001 EF39_1-HE 897 chr2R 7235807 7235842 chr2R 7240925 7240960 jockey 8 5118 1.0 4.0 2.5 2.3 5153 chr2R 7235807 intergenic not near genes chr2R 7238384 intergenic not near genes chr2R 7240960 intergenic not near genes chr2R_8_7235001 chr2R_7235001 EF39_1-HE 898 chr2R 7262178 7262209 chr2R 7269265 7269296 297 4 7087 2.5 3.5 3.0 1.0 7118 chr2R 7262178 intergenic not near genes chr2R 7265737 intergenic not near genes chr2R 7269296 intergenic not near genes chr2R_4_7265001 chr2R_7265001 EF39_1-HE 899 chr2R 7350778 7350820 chr2R 7350889 7350931 15 111 1.5 7.5 4.5 2.7 153 chr2R 7350778 intron Dscam1 - chr2R 7350854 intron Dscam1 - chr2R 7350931 intron Dscam1 - chr2R_15_7350001 chr2R_7350001 EF39_1-HE 900 chr2R 7353366 7353404 chr2R 7353498 7353536 15 131 7.0 5.5 6.2 2.1 170 chr2R 7353366 intron Dscam1 - chr2R 7353451 intron Dscam1 - chr2R 7353536 intron Dscam1 - chr2R_15_7350001 chr2R_7350001 EF39_1-HE 901 chr2R 7404570 7404604 chr2R 7404674 7404708 12 104 6.0 0.5 3.2 2.9 138 chr2R 7404570 intron Eaf - chr2R 7404639 intron Eaf - chr2R 7404708 intron Eaf - chr2R_12_7400001 chr2R_7400001 EF39_1-HE 902 chr2R 7417900 7418163 chr2R 7418012 7418268 13 106 2.5 5.5 4.0 2.6 368 chr2R 7417900 intergenic not near genes chr2R 7418084 intergenic not near genes chr2R 7418268 intergenic not near genes chr2R_13_7415001 chr2R_7415001 EF39_1-HE 903 chr2R 7434875 7434906 chr2R 7439202 7439233 Juan 8 4327 6.0 4.5 5.2 1.3 4358 chr2R 7434875 intergenic so + chr2R 7437054 intergenic not near genes chr2R 7439233 intergenic not near genes chr2R_8_7435001 chr2R_7435001 EF39_1-HE 904 chr2R 7452976 7452988 chr2R 7453078 7453088 5 101 2.0 8.0 5.0 0.8 112 chr2R 7452976 intergenic not near genes chr2R 7453032 intergenic not near genes chr2R 7453088 intergenic not near genes chr2R_5_7450001 chr2R_7450001 EF39_1-HE 905 chr2R 7604381 7604433 chr2R 7604499 7604551 8 118 2.0 1.5 1.8 2.9 170 chr2R 7604381 intron CG1358 - chr2R 7604466 intron CG1358 - chr2R 7604551 intron CG1358 - chr2R_8_7600001 chr2R_7600001 EF39_1-HE 906 chr2R 7608387 7608438 chr2R 7613616 7613666 I-element 5 5229 3.5 0.0 1.8 1.8 5279 chr2R 7608387 intron CG1358 - chr2R 7611026 intron CG1358 - chr2R 7613666 intron CG1358 - chr2R_5_7610001 chr2R_7610001 EF39_1-HE 907 chr2R 7687953 7687965 chr2R 7688101 7688113 5 148 6.5 8.0 7.2 0.6 160 chr2R 7687953 intron CG1399 - chr2R 7688033 intron CG1399 - chr2R 7688113 intron CG1399 - chr2R_5_7685001 chr2R_7685001 EF39_1-HE 908 chr2R 7696657 7696689 chr2R 7696832 7696864 7 175 4.0 3.5 3.8 1.5 207 chr2R 7696657 intron CG1399 - chr2R 7696760 intron CG1399 - chr2R 7696864 intron CG1399 - chr2R_7_7695001 chr2R_7695001 EF39_1-HE 909 chr2R 7730065 7730117 chr2R 7730171 7730217 9 105 4.5 5.5 5.0 1.5 152 chr2R 7730065 intron CG18812 - chr2R 7730141 intron CG18812 - chr2R 7730217 intron CG18812 - chr2R_9_7730001 chr2R_7730001 EF39_1-HE 910 chr2R 7737885 7737898 chr2R 7737990 7738003 6 105 11.5 7.0 9.2 0.6 118 chr2R 7737885 intergenic not near genes chr2R 7737944 intergenic not near genes chr2R 7738003 intergenic not near genes chr2R_6_7735001 chr2R_7735001 EF39_1-HE 911 chr2R 7752940 7752998 chr2R 7753098 7753156 21 158 4.0 5.5 4.8 3.6 216 chr2R 7752940 intron,intron CG30497 -,CG45093 - chr2R 7753048 intron,intron CG30497 -,CG45093 - chr2R 7753156 intron,intron CG30497 -,CG45093 - chr2R_21_7750001 chr2R_7750001 EF39_1-HE 912 chr2R 7787863 7787896 chr2R 7787971 7788005 8 108 4.0 3.5 3.8 1.7 142 chr2R 7787863 3` UTR CanB2 + chr2R 7787934 3` UTR CanB2 + chr2R 7788005 3` UTR CanB2 + chr2R_8_7785001 chr2R_7785001 EF39_1-HE 913 chr2R 7869168 7869211 chr2R 7873980 7874023 Doc 17 4812 7.0 6.0 6.5 2.3 4855 chr2R 7869168 intron Dgk - chr2R 7871596 intron Dgk - chr2R 7874023 intron Dgk - chr2R_17_7870001 chr2R_7870001 EF39_1-HE 914 chr2R 8015629 8015676 chr2R 8017678 8017725 22 2049 2.5 9.0 5.8 3.2 2096 chr2R 8015629 intergenic mir-4981 + chr2R 8016677 intergenic not near genes chr2R 8017725 intergenic not near genes chr2R_22_8015001 chr2R_8015001 EF39_1-HE 915 chr2R 8018981 8019033 chr2R 8019125 8019177 19 144 8.0 4.0 6.0 2.7 196 chr2R 8018981 intergenic CR45267 + chr2R 8019079 intergenic CR45267 + chr2R 8019177 5` UTR CR45267 + chr2R_19_8015001 chr2R_8015001 EF39_1-HE 916 chr2R 8025113 8025165 chr2R 8025238 8025290 24 125 3.0 4.0 3.5 5.3 177 chr2R 8025113 5` UTR CR45267 + chr2R 8025202 5` UTR CR45267 + chr2R 8025290 5` UTR CR45267 + chr2R_24_8025001 chr2R_8025001 EF39_1-HE 917 chr2R 8036234 8036287 chr2R 8036342 8036392 10 107 4.0 6.0 5.0 1.7 158 chr2R 8036234 intron Optix + chr2R 8036313 intron Optix + chr2R 8036392 intron Optix + chr2R_10_8035001 chr2R_8035001 EF39_1-HE 918 chr2R 8067042 8067091 chr2R 8067152 8067201 20 110 4.0 5.0 4.5 3.6 159 chr2R 8067042 intron CG17977 - chr2R 8067122 intron CG17977 - chr2R 8067201 exon CG17977 - chr2R_20_8065001 chr2R_8065001 EF39_1-HE 919 chr2R 8124029 8124070 chr2R 8124138 8124179 8 109 1.5 2.5 2.0 2.7 150 chr2R 8124029 exon Nup50 + chr2R 8124104 exon Nup50 + chr2R 8124179 exon Nup50 + chr2R_8_8120001 chr2R_8120001 EF39_1-HE 920 chr2R 8155555 8155609 chr2R 8155670 8155724 20 114 2.5 7.0 4.8 3.4 169 chr2R 8155555 intron,intron Lpin -,kermit - chr2R 8155640 intron,intron Lpin -,kermit - chr2R 8155724 intron,intron Lpin -,kermit - chr2R_20_8155001 chr2R_8155001 EF39_1-HE 921 chr2R 8201280 8201323 chr2R 8201473 8201516 INE-1 7 193 2.5 1.5 2.0 2.3 236 chr2R 8201280 intron LRP1 + chr2R 8201398 intron LRP1 + chr2R 8201516 intron LRP1 + chr2R_7_8200001 chr2R_8200001 EF39_1-HE 922 chr2R 8209582 8209625 chr2R 8209685 8209728 10 102 7.0 6.5 6.8 1.3 146 chr2R 8209582 exon LRP1 + chr2R 8209655 intron LRP1 + chr2R 8209728 exon LRP1 + chr2R_10_8205001 chr2R_8205001 EF39_1-HE 923 chr2R 8317695 8317739 chr2R 8317812 8317852 14 117 2.5 2.0 2.2 4.4 157 chr2R 8317695 intergenic not near genes chr2R 8317774 intergenic not near genes chr2R 8317852 intergenic not near genes chr2R_14_8315001 chr2R_8315001 EF39_1-HE 924 chr2R 8330836 8330889 chr2R 8331348 8331401 roo 32 512 7.5 7.5 7.5 3.8 565 chr2R 8330836 intron pdm3 + chr2R 8331118 intron pdm3 + chr2R 8331401 intron pdm3 + chr2R_32_8330001 chr2R_8330001 EF39_1-HE 925 chr2R 8385808 8385864 chr2R 8385910 8385966 24 102 5.0 5.5 5.2 3.9 158 chr2R 8385808 intron pdm3 + chr2R 8385887 intron pdm3 + chr2R 8385966 intron pdm3 + chr2R_24_8385001 chr2R_8385001 EF39_1-HE 926 chr2R 8398202 8398229 chr2R 8403005 8403036 Doc 12 4807 2.5 3.0 2.8 3.2 4834 chr2R 8398202 intron CG2121 - chr2R 8400619 intron CG2121 - chr2R 8403036 intron CG2121 - chr2R_12_8400001 chr2R_8400001 EF39_1-HE 927 chr2R 8403419 8403456 chr2R 8403528 8403563 6 105 6.0 5.5 5.8 0.9 144 chr2R 8403419 intron CG2121 - chr2R 8403491 intron CG2121 - chr2R 8403563 intron CG2121 - chr2R_6_8400001 chr2R_8400001 EF39_1-HE 928 chr2R 8419342 8419394 chr2R 8419451 8419503 8 109 0.5 1.5 1.0 4.0 161 chr2R 8419342 intergenic not near genes chr2R 8419422 intergenic not near genes chr2R 8419503 intergenic not near genes chr2R_8_8415001 chr2R_8415001 EF39_1-HE 929 chr2R 8426517 8426542 chr2R 8426618 8426647 6 102 3.5 1.5 2.5 1.7 130 chr2R 8426517 intron CSN7 + chr2R 8426582 intron CSN7 + chr2R 8426647 intron CSN7 + chr2R_6_8425001 chr2R_8425001 EF39_1-HE 930 chr2R 8454933 8454988 chr2R 8455850 8455905 7 917 24.0 14.5 19.2 0.3 972 chr2R 8454933 exon Mal-A2 + chr2R 8455419 exon Mal-A2 + chr2R 8455905 intergenic Mal-A3 -,Mal-A2 + chr2R_7_8455001 chr2R_8455001 EF39_1-HE 931 chr2R 8483938 8483989 chr2R 8484040 8484091 14 101 1.5 2.5 2.0 4.7 153 chr2R 8483938 intron mtt - chr2R 8484014 intron mtt - chr2R 8484091 intron mtt - chr2R_14_8480001 chr2R_8480001 EF39_1-HE 932 chr2R 8524923 8524978 chr2R 8525088 8525143 23 164 3.0 3.5 3.2 5.5 220 chr2R 8524923 intron mtt - chr2R 8525033 intron mtt - chr2R 8525143 intron mtt - chr2R_23_8525001 chr2R_8525001 EF39_1-HE 933 chr2R 8595941 8595989 chr2R 8596045 8596093 7 104 2.0 5.5 3.8 1.5 152 chr2R 8595941 intergenic not near genes chr2R 8596017 intergenic not near genes chr2R 8596093 intergenic not near genes chr2R_7_8595001 chr2R_8595001 EF39_1-HE 934 chr2R 8643448 8643501 chr2R 8643673 8643726 16 225 3.0 4.5 3.8 3.3 278 chr2R 8643448 intergenic not near genes chr2R 8643587 intergenic not near genes chr2R 8643726 intergenic not near genes chr2R_16_8640001 chr2R_8640001 EF39_1-HE 935 chr2R 8658215 8658252 chr2R 8658317 8658354 7 102 0.0 4.0 2.0 2.3 139 chr2R 8658215 intron ptc + chr2R 8658284 intron ptc + chr2R 8658354 intron ptc + chr2R_7_8655001 chr2R_8655001 EF39_1-HE 936 chr2R 8704698 8704747 chr2R 8704827 8704875 17 129 2.0 4.5 3.2 4.0 177 chr2R 8704698 intergenic CG12376 + chr2R 8704786 intergenic CG12376 + chr2R 8704875 intergenic CG12376 + chr2R_17_8700001 chr2R_8700001 EF39_1-HE 937 chr2R 8705342 8705381 chr2R 8705494 8705533 8 152 2.5 4.0 3.2 1.9 191 chr2R 8705342 intergenic not near genes chr2R 8705438 intergenic not near genes chr2R 8705533 intergenic not near genes chr2R_8_8705001 chr2R_8705001 EF39_1-HE 938 chr2R 8722740 8722784 chr2R 8723007 8723051 pogo 10 267 3.5 5.5 4.5 1.8 311 chr2R 8722740 intron CG14767 - chr2R 8722896 intron CG14767 - chr2R 8723051 intron CG14767 - chr2R_10_8720001 chr2R_8720001 EF39_1-HE 939 chr2R 8777900 8777942 chr2R 8784130 8784172 diver 4 6230 4.5 4.0 4.2 0.8 6272 chr2R 8777900 intergenic not near genes chr2R 8781036 intergenic not near genes chr2R 8784172 intergenic not near genes chr2R_4_8780001 chr2R_8780001 EF39_1-HE 940 chr2R 8796938 8796993 chr2R 8797051 8797106 18 112 7.0 5.5 6.2 2.5 168 chr2R 8796938 intergenic not near genes chr2R 8797022 intergenic not near genes chr2R 8797106 intergenic not near genes chr2R_18_8795001 chr2R_8795001 EF39_1-HE 941 chr2R 8803813 8803822 chr2R 8803904 8803928 5 102 12.0 5.5 8.8 0.5 115 chr2R 8803813 intron sns + chr2R 8803870 intron sns + chr2R 8803928 intron sns + chr2R_5_8800001 chr2R_8800001 EF39_1-HE 942 chr2R 8964563 8964614 chr2R 8964808 8964859 8 245 2.5 1.0 1.8 2.9 296 chr2R 8964563 intron CG8216 - chr2R 8964711 intron CG8216 - chr2R 8964859 intron CG8216 - chr2R_8_8960001 chr2R_8960001 EF39_1-HE 943 chr2R 8967432 8967701 chr2R 8967605 8967844 9 156 4.5 4.5 4.5 1.6 412 chr2R 8967432 intron CG8216 - chr2R 8967638 intron CG8216 - chr2R 8967844 intron CG8216 - chr2R_9_8965001 chr2R_8965001 EF39_1-HE 944 chr2R 9047314 9047433 chr2R 9047424 9047554 13 119 0.5 0.5 0.5 8.7 240 chr2R 9047314 intron CG13743 - chr2R 9047434 intron CG13743 - chr2R 9047554 intron CG13743 - chr2R_13_9045001 chr2R_9045001 EF39_1-HE 945 chr2R 9048481 9048523 chr2R 9048585 9048627 18 103 7.5 13.0 10.2 1.6 146 chr2R 9048481 intron CG13743 - chr2R 9048554 intron CG13743 - chr2R 9048627 intron CG13743 - chr2R_18_9045001 chr2R_9045001 EF39_1-HE 946 chr2R 9057316 9057366 chr2R 9057427 9057477 12 111 5.5 7.5 6.5 1.6 161 chr2R 9057316 intron CG13743 - chr2R 9057396 intron CG13743 - chr2R 9057477 intron CG13743 - chr2R_12_9055001 chr2R_9055001 EF39_1-HE 947 chr2R 9078461 9078505 chr2R 9078564 9078609 4 104 2.5 1.0 1.8 1.4 148 chr2R 9078461 intergenic CG8083 + chr2R 9078535 intergenic CG8083 + chr2R 9078609 intergenic CG8083 + chr2R_4_9075001 chr2R_9075001 EF39_1-HE 948 chr2R 9122459 9122513 chr2R 9122653 9122707 6 194 2.5 1.5 2.0 2.0 248 chr2R 9122459 intron GstE13 + chr2R 9122583 intron GstE13 + chr2R 9122707 exon GstE13 + chr2R_6_9120001 chr2R_9120001 EF39_1-HE 949 chr2R 9151290 9151332 chr2R 9157786 9157828 Burdock 11 6495 1.5 2.5 2.0 3.7 6538 chr2R 9151290 exon CG30345 + chr2R 9154559 intergenic not near genes chr2R 9157828 intergenic CG8008 - chr2R_11_9150001 chr2R_9150001 EF39_1-HE 950 chr2R 9212670 9212720 chr2R 9213182 9213232 roo 21 512 3.5 5.0 4.2 4.0 562 chr2R 9212670 intergenic CR45309 + chr2R 9212951 intergenic CR45309 + chr2R 9213232 5` UTR CR45309 + chr2R_21_9210001 chr2R_9210001 EF39_1-HE 951 chr2R 9406916 9406972 chr2R 9407026 9407082 19 110 5.5 2.5 4.0 3.8 166 chr2R 9406916 intron wun - chr2R 9406999 intron wun - chr2R 9407082 intron wun - chr2R_19_9405001 chr2R_9405001 EF39_1-HE 952 chr2R 9415886 9415930 chr2R 9415998 9416042 6 112 3.0 6.5 4.8 1.0 156 chr2R 9415886 intron wun2 + chr2R 9415964 intron wun2 + chr2R 9416042 intron wun2 + chr2R_6_9415001 chr2R_9415001 EF39_1-HE 953 chr2R 9439530 9439582 chr2R 9439645 9439697 6 115 3.5 2.0 2.8 1.6 167 chr2R 9439530 intron ced-6 - chr2R 9439614 intron ced-6 - chr2R 9439697 intron ced-6 - chr2R_6_9435001 chr2R_9435001 EF39_1-HE 954 chr2R 9466648 9466687 chr2R 9466755 9466793 8 107 0.5 3.5 2.0 2.7 145 chr2R 9466648 intron Camta + chr2R 9466720 intron Camta + chr2R 9466793 intron Camta + chr2R_8_9465001 chr2R_9465001 EF39_1-HE 955 chr2R 9480057 9480098 chr2R 9490614 9490655 roo 6 10557 3.5 4.0 3.8 1.2 10598 chr2R 9480057 intergenic not near genes chr2R 9485356 intergenic not near genes chr2R 9490655 intergenic not near genes chr2R_6_9485001 chr2R_9485001 EF39_1-HE 956 chr2R 9509409 9509454 chr2R 9509519 9509564 20 108 6.0 11.0 8.5 2.1 155 chr2R 9509409 intron brp + chr2R 9509486 intron brp + chr2R 9509564 intron brp + chr2R_20_9505001 chr2R_9505001 EF39_1-HE 957 chr2R 9510637 9510697 chr2R 9510779 9510839 30 142 8.0 9.5 8.8 3.1 202 chr2R 9510637 exon brp + chr2R 9510738 intron brp + chr2R 9510839 exon brp + chr2R_30_9510001 chr2R_9510001 EF39_1-HE 958 chr2R 9547608 9547629 chr2R 9547711 9547732 6 103 2.0 4.0 3.0 1.5 124 chr2R 9547608 intergenic not near genes chr2R 9547670 intergenic not near genes chr2R 9547732 intergenic not near genes chr2R_6_9545001 chr2R_9545001 EF39_1-HE 959 chr2R 9561803 9561847 chr2R 9561915 9561961 5 112 0.0 2.0 1.0 2.5 158 chr2R 9561803 3` UTR,intron CR45281 -,CG1809 + chr2R 9561882 3` UTR,intron CR45281 -,CG1809 + chr2R 9561961 3` UTR,intron CR45281 -,CG1809 + chr2R_5_9560001 chr2R_9560001 EF39_1-HE 960 chr2R 9606973 9607016 chr2R 9607084 9607127 6 111 5.0 3.5 4.2 1.2 154 chr2R 9606973 3` UTR GstT1 + chr2R 9607050 3` UTR GstT1 + chr2R 9607127 3` UTR GstT1 + chr2R_6_9605001 chr2R_9605001 EF39_1-HE 961 chr2R 9625564 9625615 chr2R 9626306 9626351 11 741 6.0 5.0 5.5 1.7 787 chr2R 9625564 intron Mmp2 - chr2R 9625958 intron Mmp2 - chr2R 9626351 intron Mmp2 - chr2R_11_9625001 chr2R_9625001 EF39_1-HE 962 chr2R 9672026 9672084 chr2R 9672158 9672214 15 131 2.0 1.5 1.8 5.4 188 chr2R 9672026 intron Mmp2 - chr2R 9672120 intron Mmp2 - chr2R 9672214 intron Mmp2 - chr2R_15_9670001 chr2R_9670001 EF39_1-HE 963 chr2R 9700357 9700403 chr2R 9700463 9700509 9 106 4.0 1.5 2.8 2.4 152 chr2R 9700357 intergenic not near genes chr2R 9700433 intergenic not near genes chr2R 9700509 intergenic not near genes chr2R_9_9700001 chr2R_9700001 EF39_1-HE 964 chr2R 9726588 9726640 chr2R 9734166 9734217 17.6 9 7578 6.0 2.0 4.0 1.8 7629 chr2R 9726588 intron sqa - chr2R 9730402 intron sqa - chr2R 9734217 intron sqa - chr2R_9_9730001 chr2R_9730001 EF39_1-HE 965 chr2R 9803105 9803163 chr2R 9803217 9803246 13 105 4.0 4.0 4.0 2.6 141 chr2R 9803105 intron CG1688 - chr2R 9803176 intron CG1688 - chr2R 9803246 intron CG1688 - chr2R_13_9800001 chr2R_9800001 EF39_1-HE 966 chr2R 9807402 9807463 chr2R 9807571 9807633 5 170 0.0 3.0 1.5 2.0 231 chr2R 9807402 intergenic not near genes chr2R 9807518 intergenic not near genes chr2R 9807633 intergenic not near genes chr2R_5_9805001 chr2R_9805001 EF39_1-HE 967 chr2R 9871019 9871069 chr2R 9871531 9871581 roo 10 512 5.0 6.0 5.5 1.5 562 chr2R 9871019 intron cbx - chr2R 9871300 intron cbx - chr2R 9871581 intron,5` UTR cbx -,CG18446 + chr2R_10_9870001 chr2R_9870001 EF39_1-HE 968 chr2R 9945415 9945452 chr2R 9945637 9945674 BS 6 222 5.5 2.0 3.8 1.2 259 chr2R 9945415 intron Mef2 - chr2R 9945544 intron Mef2 - chr2R 9945674 intron Mef2 - chr2R_6_9945001 chr2R_9945001 EF39_1-HE 969 chr2R 9950269 9950328 chr2R 9950372 9950431 11 103 2.5 2.5 2.5 3.1 162 chr2R 9950269 intron Mef2 - chr2R 9950350 intron Mef2 - chr2R 9950431 intron Mef2 - chr2R_11_9950001 chr2R_9950001 EF39_1-HE 970 chr2R 10005531 10005574 chr2R 10005665 10005708 15 134 5.0 4.0 4.5 2.7 177 chr2R 10005531 intron Pka-R2 - chr2R 10005620 intron Pka-R2 - chr2R 10005708 intron Pka-R2 - chr2R_15_10005001 chr2R_10005001 EF39_1-HE 971 chr2R 10005823 10005871 chr2R 10007014 10007062 1360 12 1191 5.0 5.5 5.2 1.9 1239 chr2R 10005823 intron Pka-R2 - chr2R 10006442 intron Pka-R2 - chr2R 10007062 intron Pka-R2 - chr2R_12_10005001 chr2R_10005001 EF39_1-HE 972 chr2R 10015869 10015915 chr2R 10015980 10016026 4 111 3.5 1.5 2.5 1.1 157 chr2R 10015869 intron Pka-R2 - chr2R 10015948 intron Pka-R2 - chr2R 10016026 intron Pka-R2 - chr2R_4_10015001 chr2R_10015001 EF39_1-HE 973 chr2R 10047811 10047836 chr2R 10047919 10047939 7 107 3.5 4.5 4.0 1.4 128 chr2R 10047811 intron oys - chr2R 10047875 intron oys - chr2R 10047939 intron oys - chr2R_7_10045001 chr2R_10045001 EF39_1-HE 974 chr2R 10168331 10168359 chr2R 10168434 10168461 8 102 2.5 7.0 4.8 1.4 130 chr2R 10168331 intron KCNQ - chr2R 10168396 intron KCNQ - chr2R 10168461 intron KCNQ - chr2R_8_10165001 chr2R_10165001 EF39_1-HE 975 chr2R 10176858 10176909 chr2R 10186051 10186102 roo 15 9193 5.0 6.0 5.5 2.3 9244 chr2R 10176858 intron KCNQ - chr2R 10181480 intron KCNQ - chr2R 10186102 intron KCNQ - chr2R_15_10180001 chr2R_10180001 EF39_1-HE 976 chr2R 10203615 10203630 chr2R 10203726 10203741 6 110 4.5 0.0 2.2 1.9 126 chr2R 10203615 intergenic not near genes chr2R 10203678 intergenic not near genes chr2R 10203741 intergenic not near genes chr2R_6_10200001 chr2R_10200001 EF39_1-HE 977 chr2R 10233302 10233354 chr2R 10233408 10233461 19 106 7.0 6.5 6.8 2.4 159 chr2R 10233302 3` UTR,intron CG12912 -,Hr46 - chr2R 10233382 3` UTR,intron CG12912 -,Hr46 - chr2R 10233461 3` UTR,intron CG12912 -,Hr46 - chr2R_19_10230001 chr2R_10230001 EF39_1-HE 978 chr2R 10234956 10234970 chr2R 10235070 10235085 4 114 11.0 0.0 5.5 0.6 129 chr2R 10234956 intron Hr46 - chr2R 10235020 intron Hr46 - chr2R 10235085 intron Hr46 - chr2R_4_10235001 chr2R_10235001 EF39_1-HE 979 chr2R 10257153 10257185 chr2R 10257262 10257302 4 115 0.0 0.0 0.0 4.0 149 chr2R 10257153 intron CG12911 + chr2R 10257228 intron CG12911 + chr2R 10257302 intron CG12911 + chr2R_4_10255001 chr2R_10255001 EF39_1-HE 980 chr2R 10269549 10269601 chr2R 10269669 10269713 12 119 3.5 3.0 3.2 2.9 164 chr2R 10269549 intron CAP + chr2R 10269631 intron CAP + chr2R 10269713 intron CAP + chr2R_12_10265001 chr2R_10265001 EF39_1-HE 981 chr2R 10274795 10274826 chr2R 10274897 10274928 7 102 3.0 0.0 1.5 2.8 133 chr2R 10274795 intron CAP + chr2R 10274862 intron CAP + chr2R 10274928 intron CAP + chr2R_7_10270001 chr2R_10270001 EF39_1-HE 982 chr2R 10300635 10300673 chr2R 10300757 10300795 5 122 0.0 0.5 0.2 4.2 160 chr2R 10300635 intron CAP + chr2R 10300715 intron CAP + chr2R 10300795 intron CAP + chr2R_5_10300001 chr2R_10300001 EF39_1-HE 983 chr2R 10319699 10319720 chr2R 10319817 10319838 4 118 3.0 2.0 2.5 1.1 139 chr2R 10319699 intron Ndg + chr2R 10319768 intron Ndg + chr2R 10319838 intron Ndg + chr2R_4_10315001 chr2R_10315001 EF39_1-HE 984 chr2R 10322056 10322064 chr2R 10322163 10322171 7 108 1.0 1.5 1.2 3.2 115 chr2R 10322056 3` UTR Ndg + chr2R 10322114 intergenic Ndg + chr2R 10322171 intergenic Ndg + chr2R_7_10320001 chr2R_10320001 EF39_1-HE 985 chr2R 10352645 10352704 chr2R 10352748 10352807 16 103 3.5 5.0 4.2 3.1 162 chr2R 10352645 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352726 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352807 intron,exon,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R_16_10350001 chr2R_10350001 EF39_1-HE 986 chr2R 10376133 10376139 chr2R 10376508 10376513 4 375 0.0 0.0 0.0 4.0 380 chr2R 10376133 intron CG42732 - chr2R 10376323 intron CG42732 - chr2R 10376513 intron CG42732 - chr2R_4_10375001 chr2R_10375001 EF39_1-HE 987 chr2R 10421860 10421896 chr2R 10421973 10422009 5 113 1.5 1.0 1.2 2.3 149 chr2R 10421860 intron,5` UTR CG11825 -,CG33474 + chr2R 10421934 intron,5` UTR CG11825 -,CG33474 + chr2R 10422009 intron,5` UTR CG11825 -,CG33474 + chr2R_5_10420001 chr2R_10420001 EF39_1-HE 988 chr2R 10428995 10429036 chr2R 10429098 10429139 7 103 1.5 0.0 0.8 3.9 144 chr2R 10428995 intergenic not near genes chr2R 10429067 intergenic not near genes chr2R 10429139 intergenic not near genes chr2R_7_10425001 chr2R_10425001 EF39_1-HE 989 chr2R 10432127 10432148 chr2R 10432264 10432284 4 137 1.5 3.0 2.2 1.2 157 chr2R 10432127 intron RanBPM + chr2R 10432206 intron RanBPM + chr2R 10432284 intron RanBPM + chr2R_4_10430001 chr2R_10430001 EF39_1-HE 990 chr2R 10453672 10453697 chr2R 10453803 10453828 6 131 5.0 1.0 3.0 1.5 156 chr2R 10453672 intron,intron Galphao +,Cyp49a1 - chr2R 10453750 intron,intron Galphao +,Cyp49a1 - chr2R 10453828 intron,intron Galphao +,Cyp49a1 - chr2R_6_10450001 chr2R_10450001 EF39_1-HE 991 chr2R 10476440 10476497 chr2R 10476546 10476603 13 106 2.0 3.0 2.5 3.7 163 chr2R 10476440 intron whd - chr2R 10476522 intron whd - chr2R 10476603 intron whd - chr2R_13_10475001 chr2R_10475001 EF39_1-HE 992 chr2R 10548106 10548134 chr2R 10548209 10548237 8 102 3.5 9.0 6.2 1.1 131 chr2R 10548106 intergenic not near genes chr2R 10548172 intergenic not near genes chr2R 10548237 intergenic not near genes chr2R_8_10545001 chr2R_10545001 EF39_1-HE 993 chr2R 10563227 10563250 chr2R 10563351 10563374 5 124 0.0 4.5 2.2 1.6 147 chr2R 10563227 intron psq + chr2R 10563300 intron psq + chr2R 10563374 intron psq + chr2R_5_10560001 chr2R_10560001 EF39_1-HE 994 chr2R 10563904 10563907 chr2R 10564121 10564124 4 217 0.0 5.5 2.8 1.1 220 chr2R 10563904 intron psq + chr2R 10564014 intron psq + chr2R 10564124 intron psq + chr2R_4_10560001 chr2R_10560001 EF39_1-HE 995 chr2R 10574601 10574635 chr2R 10574709 10574743 11 108 5.5 4.5 5.0 1.8 142 chr2R 10574601 intron psq + chr2R 10574672 intron psq + chr2R 10574743 intron psq + chr2R_11_10570001 chr2R_10570001 EF39_1-HE 996 chr2R 10637115 10637122 chr2R 10637302 10637316 6 193 0.0 3.0 1.5 2.4 201 chr2R 10637115 intron CG11883 + chr2R 10637216 intron CG11883 + chr2R 10637316 intron CG11883 + chr2R_6_10635001 chr2R_10635001 EF39_1-HE 997 chr2R 10644046 10644085 chr2R 10644150 10644189 7 104 3.5 0.0 1.8 2.5 143 chr2R 10644046 intron Git - chr2R 10644118 intron Git - chr2R 10644189 intron Git - chr2R_7_10640001 chr2R_10640001 EF39_1-HE 998 chr2R 10658711 10658754 chr2R 10658813 10658856 12 102 9.5 6.5 8.0 1.3 145 chr2R 10658711 intergenic not near genes chr2R 10658784 intergenic not near genes chr2R 10658856 intergenic not near genes chr2R_12_10655001 chr2R_10655001 EF39_1-HE 999 chr2R 10668044 10668078 chr2R 10668142 10668180 12 101 8.0 10.0 9.0 1.2 136 chr2R 10668044 intergenic not near genes chr2R 10668112 intergenic not near genes chr2R 10668180 intergenic not near genes chr2R_12_10665001 chr2R_10665001 EF39_1-HE 1000 chr2R 10687732 10687744 chr2R 10687992 10688004 4 260 2.0 5.5 3.8 0.8 272 chr2R 10687732 intron stan + chr2R 10687868 intron stan + chr2R 10688004 intron stan + chr2R_4_10685001 chr2R_10685001 EF39_1-HE 1001 chr2R 10698817 10698864 chr2R 10698930 10698977 14 113 6.0 4.0 5.0 2.3 160 chr2R 10698817 intron stan + chr2R 10698897 intron stan + chr2R 10698977 intron stan + chr2R_14_10695001 chr2R_10695001 EF39_1-HE 1002 chr2R 10761531 10761587 chr2R 10761711 10761767 11 180 2.0 1.5 1.8 3.9 236 chr2R 10761531 intron,5` UTR CG33144 -,CR43605 + chr2R 10761649 intron,5` UTR CG33144 -,CR43605 + chr2R 10761767 intron CG33144 - chr2R_11_10760001 chr2R_10760001 EF39_1-HE 1003 chr2R 10770969 10771023 chr2R 10771076 10771130 5 106 1.5 1.0 1.2 2.3 161 chr2R 10770969 intron CG33144 - chr2R 10771050 intron CG33144 - chr2R 10771130 intron CG33144 - chr2R_5_10770001 chr2R_10770001 EF39_1-HE 1004 chr2R 10806726 10806772 chr2R 10806832 10806878 9 106 2.5 3.0 2.8 2.4 152 chr2R 10806726 intron wde - chr2R 10806802 intron wde - chr2R 10806878 intron wde - chr2R_9_10805001 chr2R_10805001 EF39_1-HE 1005 chr2R 10827306 10827358 chr2R 10827420 10827472 14 114 2.0 2.0 2.0 4.7 166 chr2R 10827306 exon CG12325 + chr2R 10827389 3` UTR CG12325 + chr2R 10827472 3` UTR,3` UTR CG12325 +,CG12344 - chr2R_14_10825001 chr2R_10825001 EF39_1-HE 1006 chr2R 10848300 10848311 chr2R 10848427 10848438 5 127 2.5 5.5 4.0 1.0 138 chr2R 10848300 intron CG30015 - chr2R 10848369 intron CG30015 - chr2R 10848438 intron CG30015 - chr2R_5_10845001 chr2R_10845001 EF39_1-HE 1007 chr2R 10914866 10914877 chr2R 10914988 10915000 6 123 5.0 4.0 4.5 1.1 134 chr2R 10914866 intergenic not near genes chr2R 10914933 intergenic not near genes chr2R 10915000 intergenic not near genes chr2R_6_10910001 chr2R_10910001 EF39_1-HE 1008 chr2R 10922767 10922790 chr2R 10922879 10922898 7 111 0.0 6.5 3.2 1.7 131 chr2R 10922767 intergenic not near genes chr2R 10922832 intergenic not near genes chr2R 10922898 intergenic not near genes chr2R_7_10920001 chr2R_10920001 EF39_1-HE 1009 chr2R 10948019 10948055 chr2R 10955596 10955632 17.6 13 7577 0.0 3.0 1.5 5.2 7613 chr2R 10948019 intergenic not near genes chr2R 10951826 intergenic not near genes chr2R 10955632 intergenic not near genes chr2R_13_10950001 chr2R_10950001 EF39_1-HE 1010 chr2R 10959069 10959101 chr2R 10959174 10959206 8 104 2.5 3.5 3.0 2.0 137 chr2R 10959069 intergenic not near genes chr2R 10959138 intergenic not near genes chr2R 10959206 intergenic not near genes chr2R_8_10955001 chr2R_10955001 EF39_1-HE 1011 chr2R 10976346 10976382 chr2R 10976455 10976491 5 109 3.0 8.0 5.5 0.8 145 chr2R 10976346 intergenic not near genes chr2R 10976418 intergenic not near genes chr2R 10976491 intergenic not near genes chr2R_5_10975001 chr2R_10975001 EF39_1-HE 1012 chr2R 10979633 10979680 chr2R 10980129 10980157 297 7 490 4.0 5.5 4.8 1.2 524 chr2R 10979633 intergenic not near genes chr2R 10979895 intergenic not near genes chr2R 10980157 intergenic not near genes chr2R_7_10975001 chr2R_10975001 EF39_1-HE 1013 chr2R 11019866 11019902 chr2R 11024953 11024994 jockey 9 5091 3.5 4.5 4.0 1.8 5128 chr2R 11019866 intron luna - chr2R 11022430 intron luna - chr2R 11024994 intron luna - chr2R_9_11020001 chr2R_11020001 EF39_1-HE 1014 chr2R 11033726 11033757 chr2R 11033837 11033868 4 111 2.0 8.0 5.0 0.7 142 chr2R 11033726 intron luna - chr2R 11033797 intron luna - chr2R 11033868 intron luna - chr2R_4_11030001 chr2R_11030001 EF39_1-HE 1015 chr2R 11046512 11046563 chr2R 11046761 11046812 7 249 3.0 3.0 3.0 1.8 300 chr2R 11046512 intron luna - chr2R 11046662 intron luna - chr2R 11046812 intron luna - chr2R_7_11045001 chr2R_11045001 EF39_1-HE 1016 chr2R 11050492 11050523 chr2R 11050594 11050625 4 102 3.5 3.5 3.5 0.9 133 chr2R 11050492 intron luna - chr2R 11050558 intron luna - chr2R 11050625 intron luna - chr2R_4_11050001 chr2R_11050001 EF39_1-HE 1017 chr2R 11059864 11059921 chr2R 11059968 11060026 16 104 3.0 8.5 5.8 2.4 162 chr2R 11059864 intron luna - chr2R 11059945 intron luna - chr2R 11060026 intron luna - chr2R_16_11055001 chr2R_11055001 EF39_1-HE 1018 chr2R 11066456 11066463 chr2R 11066559 11066567 4 104 1.0 6.5 3.8 0.8 111 chr2R 11066456 intron luna - chr2R 11066512 intron luna - chr2R 11066567 intron luna - chr2R_4_11065001 chr2R_11065001 EF39_1-HE 1019 chr2R 11118148 11118183 chr2R 11118240 11118286 8 102 0.0 7.5 3.8 1.7 138 chr2R 11118148 3` UTR Cyp12d1-p - chr2R 11118217 3` UTR Cyp12d1-p - chr2R 11118286 3` UTR Cyp12d1-p - chr2R_8_11115001 chr2R_11115001 EF39_1-HE 1020 chr2R 11158554 11158591 chr2R 11158659 11158696 4 105 1.0 2.0 1.5 1.6 142 chr2R 11158554 intron CG13229 - chr2R 11158625 intron CG13229 - chr2R 11158696 intron CG13229 - chr2R_4_11155001 chr2R_11155001 EF39_1-HE 1021 chr2R 11161637 11161641 chr2R 11161803 11161807 4 166 3.5 2.0 2.8 1.1 170 chr2R 11161637 intron,intron CG13229 -,shn + chr2R 11161722 intron,intron CG13229 -,shn + chr2R 11161807 intron,intron CG13229 -,shn + chr2R_4_11160001 chr2R_11160001 EF39_1-HE 1022 chr2R 11179250 11179284 chr2R 11179362 11179396 10 112 7.5 10.5 9.0 1.0 146 chr2R 11179250 intron shn + chr2R 11179323 intron shn + chr2R 11179396 intron shn + chr2R_10_11175001 chr2R_11175001 EF39_1-HE 1023 chr2R 11207809 11207854 chr2R 11208021 11208024 BS 10 211 5.0 5.0 5.0 1.7 215 chr2R 11207809 intron shn + chr2R 11207916 intron shn + chr2R 11208024 intron shn + chr2R_10_11205001 chr2R_11205001 EF39_1-HE 1024 chr2R 11249145 11249201 chr2R 11249297 11249353 8 152 5.0 0.0 2.5 2.3 208 chr2R 11249145 intergenic CG43112 + chr2R 11249249 intergenic CG43112 + chr2R 11249353 intergenic CG43112 + chr2R_8_11245001 chr2R_11245001 EF39_1-HE 1025 chr2R 11265698 11265704 chr2R 11265806 11265812 5 108 21.5 0.0 10.8 0.4 114 chr2R 11265698 exon Cpr47Ee + chr2R 11265755 exon Cpr47Ee + chr2R 11265812 intron Cpr47Ee + chr2R_5_11265001 chr2R_11265001 EF39_1-HE 1026 chr2R 11297613 11297649 chr2R 11301960 11301996 flea 7 4347 2.5 0.0 1.2 3.2 4383 chr2R 11297613 intergenic CG42336 - chr2R 11299804 intergenic not near genes chr2R 11301996 5` UTR CG7741 + chr2R_7_11295001 chr2R_11295001 EF39_1-HE 1027 chr2R 11307527 11307564 chr2R 11307643 11307680 8 116 2.5 0.0 1.2 3.6 153 chr2R 11307527 5` UTR Fpps - chr2R 11307604 intergenic Fpps -,CG7745 + chr2R 11307680 intergenic Fpps -,CG7745 + chr2R_8_11305001 chr2R_11305001 EF39_1-HE 1028 chr2R 11391216 11391263 chr2R 11391318 11391365 11 102 4.5 3.0 3.8 2.3 149 chr2R 11391216 intron sprt - chr2R 11391290 intron sprt - chr2R 11391365 intron sprt - chr2R_11_11390001 chr2R_11390001 EF39_1-HE 1029 chr2R 11415498 11415536 chr2R 11418672 11418711 opus 13 3174 4.5 8.0 6.2 1.8 3213 chr2R 11415498 intron Drip - chr2R 11417104 intron Drip - chr2R 11418711 intron Drip - chr2R_13_11415001 chr2R_11415001 EF39_1-HE 1030 chr2R 11439181 11439215 chr2R 11439283 11439317 11 102 4.5 5.5 5.0 1.8 136 chr2R 11439181 intron CG7777 + chr2R 11439249 intron CG7777 + chr2R 11439317 intron CG7777 + chr2R_11_11435001 chr2R_11435001 EF39_1-HE 1031 chr2R 11472626 11472670 chr2R 11473849 11473893 pogo 12 1222 5.5 3.0 4.2 2.3 1267 chr2R 11472626 intergenic not near genes chr2R 11473260 intergenic not near genes chr2R 11473893 intergenic not near genes chr2R_12_11470001 chr2R_11470001 EF39_1-HE 1032 chr2R 11552165 11552201 chr2R 11552267 11552302 18 101 11.0 5.0 8.0 2.0 137 chr2R 11552165 intergenic not near genes chr2R 11552234 intergenic not near genes chr2R 11552302 intergenic not near genes chr2R_18_11550001 chr2R_11550001 EF39_1-HE 1033 chr2R 11554544 11554552 chr2R 11554647 11554655 5 103 4.5 3.0 3.8 1.0 111 chr2R 11554544 intergenic not near genes chr2R 11554600 intergenic not near genes chr2R 11554655 intergenic not near genes chr2R_5_11550001 chr2R_11550001 EF39_1-HE 1034 chr2R 11555369 11555423 chr2R 11555730 11555784 5 361 2.5 2.5 2.5 1.4 415 chr2R 11555369 intergenic not near genes chr2R 11555576 intergenic not near genes chr2R 11555784 intergenic not near genes chr2R_5_11555001 chr2R_11555001 EF39_1-HE 1035 chr2R 11574488 11574522 chr2R 11574591 11574625 16 103 7.0 5.0 6.0 2.3 137 chr2R 11574488 intergenic not near genes chr2R 11574556 intergenic not near genes chr2R 11574625 intergenic not near genes chr2R_16_11570001 chr2R_11570001 EF39_1-HE 1036 chr2R 11614598 11614796 chr2R 11614712 11614910 19 114 4.5 5.5 5.0 3.2 312 chr2R 11614598 intron tou - chr2R 11614754 intron tou - chr2R 11614910 intron tou - chr2R_19_11610001 chr2R_11610001 EF39_1-HE 1037 chr2R 11637321 11637337 chr2R 11637424 11637440 7 103 2.5 4.5 3.5 1.6 119 chr2R 11637321 intron CG9005 - chr2R 11637380 intron CG9005 - chr2R 11637440 intron CG9005 - chr2R_7_11635001 chr2R_11635001 EF39_1-HE 1038 chr2R 11660347 11660396 chr2R 11660490 11660539 13 143 3.5 4.0 3.8 2.7 192 chr2R 11660347 intron Roc2 - chr2R 11660443 intron Roc2 - chr2R 11660539 intron Roc2 - chr2R_13_11660001 chr2R_11660001 EF39_1-HE 1039 chr2R 11668142 11668177 chr2R 11668247 11668283 4 106 0.0 2.5 1.2 1.8 141 chr2R 11668142 intron,intron Roc2 -,Tret1-1 + chr2R 11668212 intron,intron Roc2 -,Tret1-1 + chr2R 11668283 intron,intron Roc2 -,Tret1-1 + chr2R_4_11665001 chr2R_11665001 EF39_1-HE 1040 chr2R 11672826 11672848 chr2R 11672939 11672961 9 113 3.0 4.5 3.8 1.9 135 chr2R 11672826 intron,exon Roc2 -,Tret1-1 + chr2R 11672894 intron,intron Roc2 -,Tret1-1 + chr2R 11672961 intron,intron Roc2 -,Tret1-1 + chr2R_9_11670001 chr2R_11670001 EF39_1-HE 1041 chr2R 11767578 11767624 chr2R 11767680 11767726 12 102 4.5 4.0 4.2 2.3 148 chr2R 11767578 intron ths + chr2R 11767652 intron ths + chr2R 11767726 intron ths + chr2R_12_11765001 chr2R_11765001 EF39_1-HE 1042 chr2R 11775910 11775966 chr2R 11776019 11776074 19 109 5.0 4.0 4.5 3.5 164 chr2R 11775910 intron ths + chr2R 11775992 intron ths + chr2R 11776074 intron ths + chr2R_19_11775001 chr2R_11775001 EF39_1-HE 1043 chr2R 11822980 11822994 chr2R 11823083 11823097 5 103 0.0 0.0 0.0 5.0 117 chr2R 11822980 intergenic not near genes chr2R 11823038 intergenic not near genes chr2R 11823097 intergenic not near genes chr2R_5_11820001 chr2R_11820001 EF39_1-HE 1044 chr2R 11846834 11846870 chr2R 11846942 11846978 5 108 2.0 5.5 3.8 1.0 144 chr2R 11846834 intron Sln + chr2R 11846906 intron Sln + chr2R 11846978 intron Sln + chr2R_5_11845001 chr2R_11845001 EF39_1-HE 1045 chr2R 11861974 11862020 chr2R 11862085 11862131 8 111 1.5 2.5 2.0 2.7 157 chr2R 11861974 3` UTR CG34230 + chr2R 11862052 intergenic CG34230 +,TwdlBeta - chr2R 11862131 intergenic CG34230 +,TwdlBeta - chr2R_8_11860001 chr2R_11860001 EF39_1-HE 1046 chr2R 11928675 11928709 chr2R 11928779 11928813 7 104 0.0 5.0 2.5 2.0 138 chr2R 11928675 intergenic not near genes chr2R 11928744 intergenic CR44312 - chr2R 11928813 intergenic CR44312 - chr2R_7_11925001 chr2R_11925001 EF39_1-HE 1047 chr2R 11951331 11951375 chr2R 11951434 11951478 10 103 4.0 1.0 2.5 2.9 147 chr2R 11951331 intron CG13188 + chr2R 11951404 intron CG13188 + chr2R 11951478 intron CG13188 + chr2R_10_11950001 chr2R_11950001 EF39_1-HE 1048 chr2R 8518784 8518804 chr2R 12066152 12066172 6 3547368 10.0 9.0 9.5 0.6 3547388 chr2R 8518784 intron mtt - chr2R 10292478 intron CAP + chr2R 12066172 intron CG8888 - chr2R_6_10290001 chr2R_10290001 EF39_1-HE 1049 chr2R 12103237 12103289 chr2R 12103531 12103583 26 293 8.5 8.5 8.5 2.7 346 chr2R 12103237 intron jeb - chr2R 12103410 intron jeb - chr2R 12103583 intron jeb - chr2R_26_12100001 chr2R_12100001 EF39_1-HE 1050 chr2R 12104654 12104702 chr2R 12104760 12104808 24 106 7.0 9.5 8.2 2.6 154 chr2R 12104654 intron jeb - chr2R 12104731 intron jeb - chr2R 12104808 intron jeb - chr2R_24_12100001 chr2R_12100001 EF39_1-HE 1051 chr2R 12120378 12120436 chr2R 12120486 12120544 10 106 2.0 4.5 3.2 2.4 166 chr2R 12120378 intergenic not near genes chr2R 12120461 intergenic not near genes chr2R 12120544 intergenic not near genes chr2R_10_12120001 chr2R_12120001 EF39_1-HE 1052 chr2R 12185976 12186028 chr2R 12186097 12186149 8 121 3.0 3.5 3.2 1.9 173 chr2R 12185976 intron Cyp6g1 + chr2R 12186062 intron Cyp6g1 + chr2R 12186149 intron Cyp6g1 + chr2R_8_12185001 chr2R_12185001 EF39_1-HE 1053 chr2R 12185225 12185243 chr2R 12188128 12188143 11 2899 23.0 79.5 51.2 0.2 2918 chr2R 12185225 3` UTR,exon CG13175 +,CG33964 + chr2R 12186684 exon Cyp6g1 + chr2R 12188143 3` UTR Cyp6g1 + chr2R_11_12185001 chr2R_12185001 EF39_1-HE 1054 chr2R 12187477 12187530 chr2R 12190067 12190122 43 2592 100.0 56.0 78.0 0.5 2645 chr2R 12187477 exon Cyp6g1 + chr2R 12188800 exon Cyp6g2 - chr2R 12190122 exon Cyp6g2 - chr2R_43_12185001 chr2R_12185001 EF39_1-HE 1055 chr2R 12217552 12217599 chr2R 12217659 12217706 13 107 1.5 4.5 3.0 3.2 154 chr2R 12217552 intergenic not near genes chr2R 12217629 intergenic not near genes chr2R 12217706 intergenic not near genes chr2R_13_12215001 chr2R_12215001 EF39_1-HE 1056 chr2R 12228359 12228404 chr2R 12228504 12228549 15 145 0.0 3.0 1.5 6.0 190 chr2R 12228359 intron CG8854 - chr2R 12228454 intron CG8854 - chr2R 12228549 intron CG8854 - chr2R_15_12225001 chr2R_12225001 EF39_1-HE 1057 chr2R 12431210 12431241 chr2R 12431313 12431344 8 103 2.0 4.5 3.2 1.9 134 chr2R 12431210 3` UTR CG43204 + chr2R 12431277 3` UTR CG43204 + chr2R 12431344 intergenic CG43204 +,DUBAI -,Nup54 - chr2R_8_12430001 chr2R_12430001 EF39_1-HE 1058 chr2R 12441823 12441868 chr2R 12441948 12441994 12 125 3.0 5.5 4.2 2.3 171 chr2R 12441823 intron Dyb + chr2R 12441908 intron Dyb + chr2R 12441994 intron Dyb + chr2R_12_12440001 chr2R_12440001 EF39_1-HE 1059 chr2R 12444068 12444121 chr2R 12444189 12444242 20 117 4.5 5.5 5.0 3.3 174 chr2R 12444068 intron Dyb + chr2R 12444155 intron Dyb + chr2R 12444242 intron Dyb + chr2R_20_12440001 chr2R_12440001 EF39_1-HE 1060 chr2R 12481138 12481160 chr2R 12482968 12482990 roo 12 1830 6.5 9.5 8.0 1.3 1852 chr2R 12481138 exon Dh44-R2 + chr2R 12482064 intron Dh44-R2 + chr2R 12482990 intron Dh44-R2 + chr2R_12_12480001 chr2R_12480001 EF39_1-HE 1061 chr2R 12501670 12501714 chr2R 12503851 12503898 Rt1c 10 2183 3.5 3.0 3.2 2.4 2228 chr2R 12501670 intron fdl - chr2R 12502784 intron fdl - chr2R 12503898 intron fdl - chr2R_10_12500001 chr2R_12500001 EF39_1-HE 1062 chr2R 12545252 12545289 chr2R 12545366 12545403 9 114 2.5 3.0 2.8 2.4 151 chr2R 12545252 intron fra + chr2R 12545328 intron fra + chr2R 12545403 intron fra + chr2R_9_12545001 chr2R_12545001 EF39_1-HE 1063 chr2R 12707496 12707543 chr2R 12715888 12715935 roo 15 8392 3.5 2.0 2.8 3.9 8439 chr2R 12707496 intron CG42663 + chr2R 12711716 intron CG42663 + chr2R 12715935 intron CG42663 + chr2R_15_12710001 chr2R_12710001 EF39_1-HE 1064 chr2R 12728850 12728890 chr2R 12728979 12729014 5 127 0.0 2.0 1.0 2.5 164 chr2R 12728850 intron CG42663 + chr2R 12728932 intron CG42663 + chr2R 12729014 intron CG42663 + chr2R_5_12725001 chr2R_12725001 EF39_1-HE 1065 chr2R 12772758 12772791 chr2R 12772871 12772904 5 113 0.0 5.5 2.8 1.3 146 chr2R 12772758 intergenic not near genes chr2R 12772831 intergenic not near genes chr2R 12772904 intergenic not near genes chr2R_5_12770001 chr2R_12770001 EF39_1-HE 1066 chr2R 12777804 12777827 chr2R 12777939 12777962 7 135 0.0 7.0 3.5 1.6 158 chr2R 12777804 5` UTR CR45266 + chr2R 12777883 5` UTR CR45266 + chr2R 12777962 5` UTR CR45266 + chr2R_7_12775001 chr2R_12775001 EF39_1-HE 1067 chr2R 12789275 12789325 chr2R 12797664 12797714 roo 24 8387 3.5 7.5 5.5 3.7 8439 chr2R 12789275 intron,3` UTR sca +,CR45137 - chr2R 12793494 intron,intron sca +,CR45137 - chr2R 12797714 intron,3` UTR sca +,CR45137 - chr2R_24_12790001 chr2R_12790001 EF39_1-HE 1068 chr2R 12808294 12808346 chr2R 12808415 12808467 15 119 4.0 4.0 4.0 3.0 173 chr2R 12808294 intergenic CG17580 + chr2R 12808380 intergenic not near genes chr2R 12808467 intergenic not near genes chr2R_15_12805001 chr2R_12805001 EF39_1-HE 1069 chr2R 12819439 12819478 chr2R 12824532 12824571 jockey 11 5090 4.5 6.5 5.5 1.7 5132 chr2R 12819439 intergenic not near genes chr2R 12822005 intergenic not near genes chr2R 12824571 intergenic not near genes chr2R_11_12820001 chr2R_12820001 EF39_1-HE 1070 chr2R 12910351 12910370 chr2R 12910460 12910479 5 109 0.5 7.0 3.8 1.0 128 chr2R 12910351 intergenic not near genes chr2R 12910415 intergenic not near genes chr2R 12910479 intergenic not near genes chr2R_5_12910001 chr2R_12910001 EF39_1-HE 1071 chr2R 12913220 12913226 chr2R 12913349 12913355 4 129 0.0 3.0 1.5 1.6 135 chr2R 12913220 intergenic not near genes chr2R 12913288 intergenic not near genes chr2R 12913355 intergenic not near genes chr2R_4_12910001 chr2R_12910001 EF39_1-HE 1072 chr2R 12934525 12934572 chr2R 12934694 12934741 13 169 3.0 3.0 3.0 3.2 216 chr2R 12934525 3` UTR CG13322 - chr2R 12934633 3` UTR CG13322 - chr2R 12934741 3` UTR CG13322 - chr2R_13_12930001 chr2R_12930001 EF39_1-HE 1073 chr2R 12950095 12950139 chr2R 12950204 12950248 6 109 4.0 0.0 2.0 2.0 153 chr2R 12950095 intron CG44251 - chr2R 12950172 intron CG44251 - chr2R 12950248 intron CG44251 - chr2R_6_12950001 chr2R_12950001 EF39_1-HE 1074 chr2R 12951639 12951695 chr2R 12951746 12951802 19 105 2.0 4.0 3.0 4.8 163 chr2R 12951639 intron,intron CG44251 -,CG44250 - chr2R 12951720 intron,intron CG44251 -,CG44250 - chr2R 12951802 intron,intron CG44251 -,CG44250 - chr2R_19_12950001 chr2R_12950001 EF39_1-HE 1075 chr2R 13050469 13050527 chr2R 13053756 13053814 15 3286 12.0 15.0 13.5 1.0 3345 chr2R 13050469 intergenic not near genes chr2R 13052142 intergenic not near genes chr2R 13053814 intergenic not near genes chr2R_15_13050001 chr2R_13050001 EF39_1-HE 1076 chr2R 13050264 13050278 chr2R 13054001 13054015 5 3737 12.0 19.0 15.5 0.3 3751 chr2R 13050264 intergenic not near genes chr2R 13052140 intergenic not near genes chr2R 13054015 intergenic not near genes chr2R_5_13050001 chr2R_13050001 EF39_1-HE 1077 chr2R 13057367 13057424 chr2R 13057502 13057559 18 135 3.5 3.0 3.2 4.3 192 chr2R 13057367 3` UTR Drl-2 - chr2R 13057463 3` UTR Drl-2 - chr2R 13057559 3` UTR Drl-2 - chr2R_18_13055001 chr2R_13055001 EF39_1-HE 1078 chr2R 13136820 13136859 chr2R 13141644 13141683 Doc 10 4824 1.0 3.0 2.0 3.3 4863 chr2R 13136820 exon Cap-G + chr2R 13139252 intron Cap-G + chr2R 13141683 intron Cap-G + chr2R_10_13135001 chr2R_13135001 EF39_1-HE 1079 chr2R 13162761 13162799 chr2R 13162871 13162911 4 110 2.5 0.5 1.5 1.6 150 chr2R 13162761 3` UTR Nrk + chr2R 13162836 3` UTR Nrk + chr2R 13162911 3` UTR Nrk + chr2R_4_13160001 chr2R_13160001 EF39_1-HE 1080 chr2R 13170704 13170741 chr2R 13170819 13170856 5 115 2.5 1.5 2.0 1.7 152 chr2R 13170704 3` UTR,3` UTR Spt-I +,CR45142 - chr2R 13170780 intergenic CR45142 -,Spt-I + chr2R 13170856 intergenic CR45142 -,Spt-I + chr2R_5_13170001 chr2R_13170001 EF39_1-HE 1081 chr2R 13175162 13175204 chr2R 13175272 13175314 5 110 11.0 12.5 11.8 0.4 152 chr2R 13175162 intergenic CG33137 +,AGBE + chr2R 13175238 intergenic CG33137 +,AGBE + chr2R 13175314 intergenic CG33137 + chr2R_5_13175001 chr2R_13175001 EF39_1-HE 1082 chr2R 13194834 13194853 chr2R 13194949 13194968 6 113 12.5 4.5 8.5 0.6 134 chr2R 13194834 intergenic not near genes chr2R 13194901 intergenic not near genes chr2R 13194968 intergenic not near genes chr2R_6_13190001 chr2R_13190001 EF39_1-HE 1083 chr2R 13220539 13220561 chr2R 13220642 13220666 6 105 0.0 7.5 3.8 1.2 127 chr2R 13220539 intron CG17059 + chr2R 13220602 intron CG17059 + chr2R 13220666 intron CG17059 + chr2R_6_13220001 chr2R_13220001 EF39_1-HE 1084 chr2R 13245639 13245682 chr2R 13245816 13245859 5 177 1.0 3.0 2.0 1.7 220 chr2R 13245639 intergenic not near genes chr2R 13245749 intergenic not near genes chr2R 13245859 intergenic not near genes chr2R_5_13245001 chr2R_13245001 EF39_1-HE 1085 chr2R 13251708 13251732 chr2R 13251810 13251834 10 102 1.5 8.5 5.0 1.7 126 chr2R 13251708 5` UTR CG4712 - chr2R 13251771 intergenic CG4712 -,CG4714 - chr2R 13251834 intergenic CG4714 -,CG4712 - chr2R_10_13250001 chr2R_13250001 EF39_1-HE 1086 chr2R 13261164 13261175 chr2R 13261285 13261296 5 121 0.0 8.0 4.0 1.0 132 chr2R 13261164 intron CG42319 + chr2R 13261230 intron CG42319 + chr2R 13261296 intron CG42319 + chr2R_5_13260001 chr2R_13260001 EF39_1-HE 1087 chr2R 13309647 13309676 chr2R 13309791 13309820 8 144 3.0 4.5 3.8 1.7 173 chr2R 13309647 intergenic not near genes chr2R 13309734 intergenic not near genes chr2R 13309820 intergenic not near genes chr2R_8_13305001 chr2R_13305001 EF39_1-HE 1088 chr2R 13356125 13356163 chr2R 13356230 13356268 7 105 6.0 2.5 4.2 1.3 143 chr2R 13356125 intergenic not near genes chr2R 13356196 intergenic not near genes chr2R 13356268 intergenic not near genes chr2R_7_13355001 chr2R_13355001 EF39_1-HE 1089 chr2R 13423646 13423691 chr2R 13423751 13423787 9 104 1.5 2.0 1.8 3.2 141 chr2R 13423646 intron,5` UTR CG42321 -,CG30060 - chr2R 13423716 intron CG42321 - chr2R 13423787 intron CG42321 - chr2R_9_13420001 chr2R_13420001 EF39_1-HE 1090 chr2R 13554755 13554773 chr2R 13554866 13554884 5 111 0.5 6.5 3.5 1.1 129 chr2R 13554755 intron Roe1 + chr2R 13554820 intron Roe1 + chr2R 13554884 intron Roe1 + chr2R_5_13550001 chr2R_13550001 EF39_1-HE 1091 chr2R 13601508 13601537 chr2R 13601611 13601629 16 102 8.0 5.0 6.5 2.1 121 chr2R 13601508 intergenic CG43058 - chr2R 13601568 intergenic CG43058 - chr2R 13601629 intergenic not near genes chr2R_16_13600001 chr2R_13600001 EF39_1-HE 1092 chr2R 13629211 13629230 chr2R 13629313 13629332 6 102 0.0 9.0 4.5 1.1 121 chr2R 13629211 intron fas + chr2R 13629272 intron fas + chr2R 13629332 intron fas + chr2R_6_13625001 chr2R_13625001 EF39_1-HE 1093 chr2R 13632290 13632314 chr2R 13632404 13632428 9 114 10.5 12.0 11.2 0.7 138 chr2R 13632290 intron fas + chr2R 13632359 intron fas + chr2R 13632428 intron fas + chr2R_9_13630001 chr2R_13630001 EF39_1-HE 1094 chr2R 13633709 13633745 chr2R 13633824 13633860 10 114 0.0 12.0 6.0 1.4 151 chr2R 13633709 intron fas + chr2R 13633784 intron fas + chr2R 13633860 intron fas + chr2R_10_13630001 chr2R_13630001 EF39_1-HE 1095 chr2R 13646775 13646813 chr2R 13646884 13646922 15 109 9.0 6.5 7.8 1.7 147 chr2R 13646775 intron fas + chr2R 13646848 intron fas + chr2R 13646922 intron fas + chr2R_15_13645001 chr2R_13645001 EF39_1-HE 1096 chr2R 13658621 13658652 chr2R 13658733 13658764 9 112 3.5 5.0 4.2 1.7 143 chr2R 13658621 intron fas + chr2R 13658692 intron fas + chr2R 13658764 intron fas + chr2R_9_13655001 chr2R_13655001 EF39_1-HE 1097 chr2R 13684244 13684268 chr2R 13684348 13684372 10 104 1.0 2.5 1.8 3.6 128 chr2R 13684244 intron fas + chr2R 13684308 intron fas + chr2R 13684372 intron fas + chr2R_10_13680001 chr2R_13680001 EF39_1-HE 1098 chr2R 13685160 13685206 chr2R 13685265 13685311 15 104 3.5 5.5 4.5 2.7 151 chr2R 13685160 intron fas + chr2R 13685236 intron fas + chr2R 13685311 intron fas + chr2R_15_13685001 chr2R_13685001 EF39_1-HE 1099 chr2R 13709811 13709832 chr2R 13709943 13709963 6 132 4.0 4.5 4.2 1.2 152 chr2R 13709811 intron fas + chr2R 13709887 intron fas + chr2R 13709963 intron fas + chr2R_6_13705001 chr2R_13705001 EF39_1-HE 1100 chr2R 13721180 13721224 chr2R 13721289 13721333 13 109 9.5 6.5 8.0 1.4 153 chr2R 13721180 intron fas + chr2R 13721256 intron fas + chr2R 13721333 intron fas + chr2R_13_13720001 chr2R_13720001 EF39_1-HE 1101 chr2R 13728106 13728119 chr2R 13735792 13735805 opus 8 7686 11.0 0.0 5.5 1.2 7699 chr2R 13728106 intron fas + chr2R 13731956 intron fas + chr2R 13735805 intron fas + chr2R_8_13730001 chr2R_13730001 EF39_1-HE 1102 chr2R 13738879 13738936 chr2R 13738996 13739053 8 117 2.5 7.5 5.0 1.3 174 chr2R 13738879 intron fas + chr2R 13738966 intron fas + chr2R 13739053 intron fas + chr2R_8_13735001 chr2R_13735001 EF39_1-HE 1103 chr2R 13768958 13769010 chr2R 13769083 13769135 10 125 5.0 2.5 3.8 2.1 177 chr2R 13768958 intergenic not near genes chr2R 13769046 intergenic not near genes chr2R 13769135 intergenic not near genes chr2R_10_13765001 chr2R_13765001 EF39_1-HE 1104 chr2R 13770513 13770527 chr2R 13770629 13770643 4 116 0.0 4.5 2.2 1.2 130 chr2R 13770513 intron Cpr50Ca + chr2R 13770578 intron Cpr50Ca + chr2R 13770643 intron Cpr50Ca + chr2R_4_13770001 chr2R_13770001 EF39_1-HE 1105 chr2R 13771744 13771761 chr2R 13771876 13771890 6 132 6.0 0.0 3.0 1.5 146 chr2R 13771744 intron Cpr50Ca + chr2R 13771817 intron Cpr50Ca + chr2R 13771890 intron Cpr50Ca + chr2R_6_13770001 chr2R_13770001 EF39_1-HE 1106 chr2R 13785469 13785518 chr2R 13785574 13785618 13 105 6.0 5.5 5.8 1.9 149 chr2R 13785469 intron Cpr50Ca + chr2R 13785544 intron Cpr50Ca + chr2R 13785618 intron Cpr50Ca + chr2R_13_13785001 chr2R_13785001 EF39_1-HE 1107 chr2R 13855957 13856010 chr2R 13856072 13856125 6 115 2.5 1.5 2.0 2.0 168 chr2R 13855957 intergenic CR44367 +,CG6553 -,tum - chr2R 13856041 intergenic tum -,CR44367 +,CG6553 - chr2R 13856125 intergenic tum -,CR44367 +,CG6553 - chr2R_6_13855001 chr2R_13855001 EF39_1-HE 1108 chr2R 13905573 13905632 chr2R 13907581 13907640 Rt1a 14 2008 0.0 7.0 3.5 3.1 2067 chr2R 13905573 intron shot - chr2R 13906606 intron shot - chr2R 13907640 intron shot - chr2R_14_13905001 chr2R_13905001 EF39_1-HE 1109 chr2R 13925823 13925869 chr2R 13926025 13926071 20 202 5.0 5.0 5.0 3.3 248 chr2R 13925823 intron shot - chr2R 13925947 intron shot - chr2R 13926071 intron shot - chr2R_20_13925001 chr2R_13925001 EF39_1-HE 1110 chr2R 13933408 13933440 chr2R 13933516 13933548 13 108 9.5 3.5 6.5 1.7 140 chr2R 13933408 intron shot - chr2R 13933478 intron shot - chr2R 13933548 intron shot - chr2R_13_13930001 chr2R_13930001 EF39_1-HE 1111 chr2R 14050839 14050853 chr2R 14050941 14050956 5 103 4.0 9.5 6.8 0.6 117 chr2R 14050839 intron mam + chr2R 14050898 intron mam + chr2R 14050956 intron mam + chr2R_5_14050001 chr2R_14050001 EF39_1-HE 1112 chr2R 14285033 14285050 chr2R 14285142 14285159 9 109 7.0 2.0 4.5 1.6 126 chr2R 14285033 intron Ih + chr2R 14285096 intron Ih + chr2R 14285159 intron Ih + chr2R_9_14285001 chr2R_14285001 EF39_1-HE 1113 chr2R 14357554 14357568 chr2R 14357670 14357684 5 116 2.0 3.5 2.8 1.3 130 chr2R 14357554 intergenic CG8617 -,Arc1 - chr2R 14357619 intergenic Arc1 -,CG8617 - chr2R 14357684 intergenic Arc1 -,CG8617 - chr2R_5_14355001 chr2R_14355001 EF39_1-HE 1114 chr2R 14400483 14400549 chr2R 14400596 14400654 5 108 1.5 2.0 1.8 1.8 171 chr2R 14400483 intergenic not near genes chr2R 14400568 intergenic not near genes chr2R 14400654 intergenic not near genes chr2R_5_14400001 chr2R_14400001 EF39_1-HE 1115 chr2R 14467267 14467325 chr2R 14476445 14476497 roo 13 9176 1.5 4.0 2.8 3.4 9230 chr2R 14467267 intergenic not near genes chr2R 14471882 intergenic not near genes chr2R 14476497 5` UTR CR44462 + chr2R_13_14470001 chr2R_14470001 EF39_1-HE 1116 chr2R 14497365 14497412 chr2R 14498557 14498604 1360 15 1192 5.0 4.5 4.8 2.6 1239 chr2R 14497365 3` UTR Cpsf160 - chr2R 14497984 intron Cpsf160 - chr2R 14498604 3` UTR Cpsf160 - chr2R_15_14495001 chr2R_14495001 EF39_1-HE 1117 chr2R 14530341 14530375 chr2R 14530456 14530490 14 115 9.5 7.0 8.2 1.5 149 chr2R 14530341 intron ttv + chr2R 14530416 intron ttv + chr2R 14530490 intron ttv + chr2R_14_14530001 chr2R_14530001 EF39_1-HE 1118 chr2R 14550471 14550521 chr2R 14552521 14552554 10 2037 4.0 46.5 25.2 0.4 2083 chr2R 14550471 intron ttv + chr2R 14551512 intron ttv + chr2R 14552554 intron ttv + chr2R_10_14550001 chr2R_14550001 EF39_1-HE 1119 chr2R 14574669 14574702 chr2R 14574788 14574822 6 120 3.5 3.0 3.2 1.4 153 chr2R 14574669 intron,intron ttv +,LamC - chr2R 14574746 intron,intron ttv +,LamC - chr2R 14574822 intron,intron ttv +,LamC - chr2R_6_14570001 chr2R_14570001 EF39_1-HE 1120 chr2R 14653903 14653926 chr2R 14654008 14654030 9 104 11.0 8.0 9.5 0.9 127 chr2R 14653903 intergenic not near genes chr2R 14653966 intergenic not near genes chr2R 14654030 intergenic not near genes chr2R_9_14650001 chr2R_14650001 EF39_1-HE 1121 chr2R 14709598 14709605 chr2R 14709712 14709719 5 113 3.0 8.0 5.5 0.8 121 chr2R 14709598 intron mspo - chr2R 14709658 intron mspo - chr2R 14709719 intron mspo - chr2R_5_14705001 chr2R_14705001 EF39_1-HE 1122 chr2R 14722291 14722296 chr2R 14722421 14722426 4 130 3.0 8.5 5.8 0.6 135 chr2R 14722291 intergenic not near genes chr2R 14722358 intergenic not near genes chr2R 14722426 intergenic not near genes chr2R_4_14720001 chr2R_14720001 EF39_1-HE 1123 chr2R 14747454 14747670 chr2R 14749248 14749458 4 1792 0.5 13.0 6.8 0.5 2004 chr2R 14747454 exon AttA + chr2R 14748456 intergenic AttA + chr2R 14749458 exon AttB + chr2R_4_14745001 chr2R_14745001 EF39_1-HE 1124 chr2R 14803453 14803506 chr2R 14803559 14803612 8 106 0.0 4.5 2.2 2.5 159 chr2R 14803453 intron kn - chr2R 14803532 intron kn - chr2R 14803612 intron kn - chr2R_8_14800001 chr2R_14800001 EF39_1-HE 1125 chr2R 14811615 14811665 chr2R 14811724 14811773 11 109 2.5 3.0 2.8 2.9 158 chr2R 14811615 intergenic not near genes chr2R 14811694 intergenic not near genes chr2R 14811773 intergenic not near genes chr2R_11_14810001 chr2R_14810001 EF39_1-HE 1126 chr2R 14842366 14842395 chr2R 14842488 14842517 9 122 4.0 2.0 3.0 2.2 151 chr2R 14842366 intergenic NaPi-T - chr2R 14842442 intergenic NaPi-T - chr2R 14842517 intergenic NaPi-T - chr2R_9_14840001 chr2R_14840001 EF39_1-HE 1127 chr2R 14889188 14889211 chr2R 14897822 14897845 Max-element 4 8634 6.5 0.0 3.2 1.0 8657 chr2R 14889188 intergenic Cyp6a8 - chr2R 14893516 intergenic not near genes chr2R 14897845 intergenic not near genes chr2R_4_14890001 chr2R_14890001 EF39_1-HE 1128 chr2R 14911680 14911718 chr2R 14911829 14911867 8 148 7.5 3.0 5.2 1.3 187 chr2R 14911680 intron CG10249 - chr2R 14911774 intron CG10249 - chr2R 14911867 intron CG10249 - chr2R_8_14910001 chr2R_14910001 EF39_1-HE 1129 chr2R 14916541 14916555 chr2R 14916647 14916661 4 106 3.5 1.0 2.2 1.2 120 chr2R 14916541 intron CG10249 - chr2R 14916601 intron CG10249 - chr2R 14916661 intron CG10249 - chr2R_4_14915001 chr2R_14915001 EF39_1-HE 1130 chr2R 14919237 14919260 chr2R 14919344 14919367 5 107 0.0 4.0 2.0 1.7 130 chr2R 14919237 intron CG10249 - chr2R 14919302 intron CG10249 - chr2R 14919367 intron CG10249 - chr2R_5_14915001 chr2R_14915001 EF39_1-HE 1131 chr2R 14922119 14922171 chr2R 14922221 14922273 11 102 2.5 3.5 3.0 2.8 154 chr2R 14922119 intron CG10249 - chr2R 14922196 intron CG10249 - chr2R 14922273 intron CG10249 - chr2R_11_14920001 chr2R_14920001 EF39_1-HE 1132 chr2R 14957645 14957666 chr2R 14957766 14957787 8 121 3.5 1.0 2.2 2.5 142 chr2R 14957645 intron aPKC - chr2R 14957716 intron aPKC - chr2R 14957787 intron aPKC - chr2R_8_14955001 chr2R_14955001 EF39_1-HE 1133 chr2R 15004737 15004761 chr2R 15005092 15005116 jockey 7 355 3.0 5.0 4.0 1.4 379 chr2R 15004737 intergenic not near genes chr2R 15004926 intergenic not near genes chr2R 15005116 intergenic not near genes chr2R_7_15000001 chr2R_15000001 EF39_1-HE 1134 chr2R 15013813 15013864 chr2R 15013940 15013991 18 127 3.5 4.5 4.0 3.6 178 chr2R 15013813 intron hbs + chr2R 15013902 intron hbs + chr2R 15013991 intron hbs + chr2R_18_15010001 chr2R_15010001 EF39_1-HE 1135 chr2R 15015433 15015488 chr2R 15022881 15022934 mdg1 8 7446 5.0 1.5 3.2 1.9 7501 chr2R 15015433 intron hbs + chr2R 15019184 intron hbs + chr2R 15022934 intron hbs + chr2R_8_15015001 chr2R_15015001 EF39_1-HE 1136 chr2R 15051061 15051110 chr2R 15051166 15051218 23 108 7.5 8.0 7.8 2.6 157 chr2R 15051061 intergenic not near genes chr2R 15051140 intergenic not near genes chr2R 15051218 intergenic not near genes chr2R_23_15050001 chr2R_15050001 EF39_1-HE 1137 chr2R 15084957 15084996 chr2R 15092032 15092071 297 18 7074 2.0 10.0 6.0 2.6 7114 chr2R 15084957 intergenic not near genes chr2R 15088514 intergenic not near genes chr2R 15092071 5` UTR CR44457 + chr2R_18_15085001 chr2R_15085001 EF39_1-HE 1138 chr2R 15092320 15092367 chr2R 15092433 15092480 7 113 4.0 3.0 3.5 1.6 160 chr2R 15092320 5` UTR CR44457 + chr2R 15092400 5` UTR CR44457 + chr2R 15092480 intergenic CR44457 + chr2R_7_15090001 chr2R_15090001 EF39_1-HE 1139 chr2R 15119295 15119346 chr2R 15127802 15127853 Tirant 18 8507 9.0 7.0 8.0 2.0 8558 chr2R 15119295 intron chn + chr2R 15123574 intron chn + chr2R 15127853 intron chn + chr2R_18_15120001 chr2R_15120001 EF39_1-HE 1140 chr2R 15170082 15170112 chr2R 15170193 15170210 6 108 2.0 9.5 5.8 0.9 128 chr2R 15170082 intron igl + chr2R 15170146 intron igl + chr2R 15170210 intron igl + chr2R_6_15170001 chr2R_15170001 EF39_1-HE 1141 chr2R 15230365 15230374 chr2R 15230666 15230675 4 301 12.0 3.5 7.8 0.5 310 chr2R 15230365 intron,5` UTR Fs -,CR44370 + chr2R 15230520 intron,5` UTR Fs -,CR44370 + chr2R 15230675 intron,5` UTR Fs -,CR44370 + chr2R_4_15230001 chr2R_15230001 EF39_1-HE 1142 chr2R 15308334 15308379 chr2R 15308442 15308488 14 107 2.0 6.5 4.2 2.7 154 chr2R 15308334 intron Trpm - chr2R 15308411 intron Trpm - chr2R 15308488 intron Trpm - chr2R_14_15305001 chr2R_15305001 EF39_1-HE 1143 chr2R 15402568 15402611 chr2R 15402707 15402750 13 139 1.0 2.0 1.5 5.2 182 chr2R 15402568 intron CG43729 + chr2R 15402659 intron CG43729 + chr2R 15402750 intron CG43729 + chr2R_13_15400001 chr2R_15400001 EF39_1-HE 1144 chr2R 15403930 15403980 chr2R 15404033 15404085 16 102 5.0 5.0 5.0 2.7 155 chr2R 15403930 intron CG43729 + chr2R 15404008 intron CG43729 + chr2R 15404085 intron CG43729 + chr2R_16_15400001 chr2R_15400001 EF39_1-HE 1145 chr2R 15477686 15477739 chr2R 15477794 15477846 15 108 2.0 0.5 1.2 6.8 160 chr2R 15477686 intron CG8180 - chr2R 15477766 intron CG8180 - chr2R 15477846 intron CG8180 - chr2R_15_15475001 chr2R_15475001 EF39_1-HE 1146 chr2R 15503774 15503826 chr2R 15503879 15503931 7 105 4.0 2.5 3.2 1.7 157 chr2R 15503774 intergenic Ir52b +,Ir52c + chr2R 15503852 intergenic Ir52b +,Ir52c + chr2R 15503931 intergenic Ir52c +,Ir52b + chr2R_7_15500001 chr2R_15500001 EF39_1-HE 1147 chr2R 15529932 15529979 chr2R 15530047 15530094 10 115 2.5 6.0 4.2 1.9 162 chr2R 15529932 intron Khc-73 - chr2R 15530013 intron Khc-73 - chr2R 15530094 intron Khc-73 - chr2R_10_15530001 chr2R_15530001 EF39_1-HE 1148 chr2R 15706488 15706536 chr2R 15706623 15706671 15 133 2.5 3.0 2.8 3.9 183 chr2R 15706488 intergenic not near genes chr2R 15706580 intergenic not near genes chr2R 15706671 intergenic not near genes chr2R_15_15705001 chr2R_15705001 EF39_1-HE 1149 chr2R 15755204 15755247 chr2R 15755313 15755356 7 107 4.0 2.5 3.2 1.7 152 chr2R 15755204 intron CG30089 + chr2R 15755280 intron CG30089 + chr2R 15755356 intron CG30089 + chr2R_7_15755001 chr2R_15755001 EF39_1-HE 1150 chr2R 15869325 15869365 chr2R 15869431 15869471 4 106 0.5 2.0 1.2 1.8 146 chr2R 15869325 intergenic sli -,Rif1 - chr2R 15869398 intergenic sli -,Rif1 - chr2R 15869471 intergenic sli -,Rif1 - chr2R_4_15865001 chr2R_15865001 EF39_1-HE 1151 chr2R 16009142 16009192 chr2R 16009249 16009297 7 107 0.5 4.0 2.2 2.2 155 chr2R 16009142 intron CG8389 + chr2R 16009220 intron CG8389 + chr2R 16009297 intron CG8389 + chr2R_7_16005001 chr2R_16005001 EF39_1-HE 1152 chr2R 16030565 16030580 chr2R 16030706 16030720 7 141 0.0 8.5 4.2 1.3 155 chr2R 16030565 intergenic CG8401 + chr2R 16030642 intergenic not near genes chr2R 16030720 intergenic not near genes chr2R_7_16030001 chr2R_16030001 EF39_1-HE 1153 chr2R 16054936 16054957 chr2R 16055040 16055064 4 106 11.0 12.0 11.5 0.3 128 chr2R 16054936 intron CG8405 + chr2R 16055000 intron CG8405 + chr2R 16055064 intron CG8405 + chr2R_4_16050001 chr2R_16050001 EF39_1-HE 1154 chr2R 16079224 16079275 chr2R 16079338 16079389 7 114 4.5 1.5 3.0 1.8 165 chr2R 16079224 intergenic CR43415 - chr2R 16079306 intergenic CR43415 - chr2R 16079389 intergenic not near genes chr2R_7_16075001 chr2R_16075001 EF39_1-HE 1155 chr2R 16080449 16080478 chr2R 16080562 16080591 8 113 0.5 4.0 2.2 2.5 142 chr2R 16080449 intergenic not near genes chr2R 16080520 intergenic not near genes chr2R 16080591 intergenic not near genes chr2R_8_16080001 chr2R_16080001 EF39_1-HE 1156 chr2R 16096165 16096191 chr2R 16096272 16096298 6 107 0.5 3.5 2.0 2.0 133 chr2R 16096165 intron Dg - chr2R 16096232 intron Dg - chr2R 16096298 intron Dg - chr2R_6_16095001 chr2R_16095001 EF39_1-HE 1157 chr2R 16123721 16123762 chr2R 16123820 16123868 5 104 0.0 4.5 2.2 1.6 147 chr2R 16123721 intron CG30095 + chr2R 16123794 intron CG30095 + chr2R 16123868 intron CG30095 + chr2R_5_16120001 chr2R_16120001 EF39_1-HE 1158 chr2R 16185995 16186048 chr2R 16186105 16186157 12 110 1.5 2.0 1.8 4.3 162 chr2R 16185995 5` UTR CG8441 - chr2R 16186076 intron CG8441 - chr2R 16186157 intron CG8441 - chr2R_12_16185001 chr2R_16185001 EF39_1-HE 1159 chr2R 16245404 16245427 chr2R 16245523 16245547 4 120 0.5 2.0 1.2 1.8 143 chr2R 16245404 intron CngA - chr2R 16245476 intron CngA - chr2R 16245547 intron CngA - chr2R_4_16245001 chr2R_16245001 EF39_1-HE 1160 chr2R 16300433 16300492 chr2R 16300543 16300594 13 105 0.0 5.0 2.5 3.7 161 chr2R 16300433 3` UTR CR45232 - chr2R 16300514 3` UTR CR45232 - chr2R 16300594 3` UTR CR45232 - chr2R_13_16300001 chr2R_16300001 EF39_1-HE 1161 chr2R 16452759 16452792 chr2R 16452876 16452896 7 115 5.0 1.0 3.0 1.8 137 chr2R 16452759 intergenic not near genes chr2R 16452828 intergenic not near genes chr2R 16452896 intergenic not near genes chr2R_7_16450001 chr2R_16450001 EF39_1-HE 1162 chr2R 16472919 16473173 chr2R 16473033 16473303 16 115 15.5 4.5 10.0 1.5 384 chr2R 16472919 intergenic not near genes chr2R 16473111 intergenic not near genes chr2R 16473303 intergenic not near genes chr2R_16_16470001 chr2R_16470001 EF39_1-HE 1163 chr2R 16487740 16487754 chr2R 16487845 16487859 4 105 10.0 2.5 6.2 0.6 119 chr2R 16487740 exon CG33458 + chr2R 16487800 3` UTR CG33458 + chr2R 16487859 intergenic CG33458 +,CG33459 + chr2R_4_16485001 chr2R_16485001 EF39_1-HE 1164 chr2R 16493355 16493399 chr2R 16493524 16493568 19 167 3.0 5.0 4.0 3.8 213 chr2R 16493355 intergenic S-Lap8 + chr2R 16493462 intergenic S-Lap8 + chr2R 16493568 intergenic S-Lap8 + chr2R_19_16490001 chr2R_16490001 EF39_1-HE 1165 chr2R 16503874 16503900 chr2R 16503964 16504016 9 113 2.0 2.5 2.2 2.8 142 chr2R 16503874 intron Sema-2a + chr2R 16503945 intron Sema-2a + chr2R 16504016 intron Sema-2a + chr2R_9_16500001 chr2R_16500001 EF39_1-HE 1166 chr2R 16520631 16520683 chr2R 16520736 16520788 12 104 2.0 0.5 1.2 5.5 157 chr2R 16520631 intron Sema-2a + chr2R 16520710 intron Sema-2a + chr2R 16520788 intron Sema-2a + chr2R_12_16520001 chr2R_16520001 EF39_1-HE 1167 chr2R 16546979 16547011 chr2R 16547085 16547115 8 105 0.0 0.0 0.0 8.0 136 chr2R 16546979 intergenic not near genes chr2R 16547047 intergenic not near genes chr2R 16547115 intergenic not near genes chr2R_8_16545001 chr2R_16545001 EF39_1-HE 1168 chr2R 16553109 16553160 chr2R 16553211 16553262 11 101 2.5 2.0 2.2 3.4 153 chr2R 16553109 intron Syn2 + chr2R 16553186 intron Syn2 + chr2R 16553262 intron Syn2 + chr2R_11_16550001 chr2R_16550001 EF39_1-HE 1169 chr2R 16618701 16618740 chr2R 16618803 16618842 10 99 0.0 5.0 2.5 2.9 141 chr2R 16618701 intron CG5065 + chr2R 16618772 intron CG5065 + chr2R 16618842 5` UTR CG5065 + chr2R_10_16615001 chr2R_16615001 EF39_1-HE 1170 chr2R 16625222 16625271 chr2R 16625324 16625373 14 102 3.0 6.5 4.8 2.4 151 chr2R 16625222 intergenic Alk -,CG5065 + chr2R 16625298 3` UTR Alk - chr2R 16625373 3` UTR Alk - chr2R_14_16625001 chr2R_16625001 EF39_1-HE 1171 chr2R 16635875 16635934 chr2R 16635999 16636058 11 123 1.5 2.5 2.0 3.7 183 chr2R 16635875 intron Alk - chr2R 16635966 intron Alk - chr2R 16636058 intron Alk - chr2R_11_16635001 chr2R_16635001 EF39_1-HE 1172 chr2R 16638839 16638885 chr2R 16638948 16638951 12 105 3.5 6.0 4.8 2.1 112 chr2R 16638839 intron Alk - chr2R 16638895 intron Alk - chr2R 16638951 intron Alk - chr2R_12_16635001 chr2R_16635001 EF39_1-HE 1173 chr2R 16664305 16664356 chr2R 16664416 16664468 9 112 2.5 0.0 1.2 4.1 163 chr2R 16664305 intron Picot - chr2R 16664386 intron Picot - chr2R 16664468 intron Picot - chr2R_9_16660001 chr2R_16660001 EF39_1-HE 1174 chr2R 16723899 16723948 chr2R 16724005 16724054 14 106 1.5 0.5 1.0 7.0 155 chr2R 16723899 intron CG30463 - chr2R 16723976 intron CG30463 - chr2R 16724054 intron CG30463 - chr2R_14_16720001 chr2R_16720001 EF39_1-HE 1175 chr2R 16739418 16739468 chr2R 16739529 16739577 6 109 5.0 0.0 2.5 1.7 159 chr2R 16739418 intergenic not near genes chr2R 16739498 intergenic not near genes chr2R 16739577 intergenic not near genes chr2R_6_16735001 chr2R_16735001 EF39_1-HE 1176 chr2R 16775635 16775648 chr2R 16775922 16775941 5 292 6.0 2.5 4.2 1.0 306 chr2R 16775635 3` UTR Arp53D + chr2R 16775788 intergenic Arp53D + chr2R 16775941 intergenic Arp53D + chr2R_5_16775001 chr2R_16775001 EF39_1-HE 1177 chr2R 16785108 16785153 chr2R 16785217 16785261 15 108 7.0 6.0 6.5 2.0 153 chr2R 16785108 intron CG5522 + chr2R 16785184 intron CG5522 + chr2R 16785261 intron CG5522 + chr2R_15_16785001 chr2R_16785001 EF39_1-HE 1178 chr2R 16923818 16923828 chr2R 16923923 16923933 5 105 0.0 1.5 0.8 2.8 115 chr2R 16923818 intergenic not near genes chr2R 16923876 intergenic not near genes chr2R 16923933 intergenic not near genes chr2R_5_16920001 chr2R_16920001 EF39_1-HE 1179 chr2R 16923836 16923840 chr2R 16923919 16923945 4 100 0.0 1.5 0.8 2.2 109 chr2R 16923836 intergenic not near genes chr2R 16923890 intergenic not near genes chr2R 16923945 intergenic not near genes chr2R_4_16920001 chr2R_16920001 EF39_1-HE 1180 chr2R 16978463 16978508 chr2R 16978575 16978621 11 113 4.5 6.0 5.2 1.8 158 chr2R 16978463 intron Cbp53E + chr2R 16978542 intron Cbp53E + chr2R 16978621 intron Cbp53E + chr2R_11_16975001 chr2R_16975001 EF39_1-HE 1181 chr2R 17009015 17009058 chr2R 17009605 17009648 11 590 4.5 5.0 4.8 1.9 633 chr2R 17009015 intron Ehbp1 - chr2R 17009332 intron Ehbp1 - chr2R 17009648 intron Ehbp1 - chr2R_11_17005001 chr2R_17005001 EF39_1-HE 1182 chr2R 17074272 17074312 chr2R 17074387 17074427 18 115 7.5 5.0 6.2 2.5 155 chr2R 17074272 intron CG30460 - chr2R 17074350 intron CG30460 - chr2R 17074427 intron CG30460 - chr2R_18_17070001 chr2R_17070001 EF39_1-HE 1183 chr2R 17080056 17080104 chr2R 17080195 17080243 18 139 5.0 1.0 3.0 4.5 187 chr2R 17080056 intron CG30460 - chr2R 17080150 intron CG30460 - chr2R 17080243 intron CG30460 - chr2R_18_17080001 chr2R_17080001 EF39_1-HE 1184 chr2R 17121900 17121947 chr2R 17122013 17122060 11 113 3.5 2.5 3.0 2.8 160 chr2R 17121900 5` UTR CR45272 + chr2R 17121980 5` UTR CR45272 + chr2R 17122060 5` UTR CR45272 + chr2R_11_17120001 chr2R_17120001 EF39_1-HE 1185 chr2R 17122290 17122319 chr2R 17122386 17122429 4 101 1.0 1.0 1.0 2.0 139 chr2R 17122290 5` UTR CR45272 + chr2R 17122360 5` UTR CR45272 + chr2R 17122429 5` UTR CR45272 + chr2R_4_17120001 chr2R_17120001 EF39_1-HE 1186 chr2R 17122933 17122954 chr2R 17123042 17123063 4 109 1.0 2.5 1.8 1.4 130 chr2R 17122933 5` UTR,3` UTR CR45272 +,Spn53F - chr2R 17122998 5` UTR,3` UTR CR45272 +,Spn53F - chr2R 17123063 5` UTR,exon CR45272 +,Spn53F - chr2R_4_17120001 chr2R_17120001 EF39_1-HE 1187 chr2R 17169195 17169229 chr2R 17169309 17169343 9 114 4.0 0.0 2.0 3.0 148 chr2R 17169195 intergenic not near genes chr2R 17169269 intergenic not near genes chr2R 17169343 intergenic not near genes chr2R_9_17165001 chr2R_17165001 EF39_1-HE 1188 chr2R 17188711 17188741 chr2R 17188825 17188854 8 114 2.5 3.5 3.0 2.0 143 chr2R 17188711 intergenic CR44389 - chr2R 17188782 intergenic CR44389 - chr2R 17188854 3` UTR CR44389 - chr2R_8_17185001 chr2R_17185001 EF39_1-HE 1189 chr2R 17236485 17236531 chr2R 17241715 17241761 copia 18 5230 7.0 4.5 5.8 2.6 5276 chr2R 17236485 intron mbl + chr2R 17239123 intron mbl + chr2R 17241761 intron mbl + chr2R_18_17235001 chr2R_17235001 EF39_1-HE 1190 chr2R 17307707 17307751 chr2R 17307810 17307854 9 102 3.0 1.5 2.2 2.8 147 chr2R 17307707 intron mbl + chr2R 17307780 intron mbl + chr2R 17307854 intron mbl + chr2R_9_17305001 chr2R_17305001 EF39_1-HE 1191 chr2R 17395288 17395314 chr2R 17395392 17395418 4 104 1.0 3.0 2.0 1.3 130 chr2R 17395288 intron Sip1 + chr2R 17395353 intron Sip1 + chr2R 17395418 intron Sip1 + chr2R_4_17395001 chr2R_17395001 EF39_1-HE 1192 chr2R 17419915 17419962 chr2R 17420022 17420066 6 105 2.5 0.5 1.5 2.4 151 chr2R 17419915 5` UTR cnk - chr2R 17419990 5` UTR cnk - chr2R 17420066 intergenic cnk -,l(2)k01209 + chr2R_6_17415001 chr2R_17415001 EF39_1-HE 1193 chr2R 17443750 17443797 chr2R 17443851 17443899 16 102 4.0 2.5 3.2 3.8 149 chr2R 17443750 intron EDTP - chr2R 17443824 intron EDTP - chr2R 17443899 intron EDTP - chr2R_16_17440001 chr2R_17440001 EF39_1-HE 1194 chr2R 17485898 17485941 chr2R 17490686 17490727 F-element 4 4787 4.5 1.5 3.0 1.0 4829 chr2R 17485898 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17488312 intron NT5E-2 + chr2R 17490727 intron NT5E-2 + chr2R_4_17485001 chr2R_17485001 EF39_1-HE 1195 chr2R 17532229 17532244 chr2R 17532332 17532347 7 103 11.5 5.0 8.2 0.8 118 chr2R 17532229 intron Patronin - chr2R 17532288 intron Patronin - chr2R 17532347 intron Patronin - chr2R_7_17530001 chr2R_17530001 EF39_1-HE 1196 chr2R 17556420 17556458 chr2R 17556532 17556569 5 112 4.5 1.0 2.8 1.3 149 chr2R 17556420 intergenic MESR4 + chr2R 17556494 intergenic MESR4 + chr2R 17556569 intergenic MESR4 +,Klp54D + chr2R_5_17555001 chr2R_17555001 EF39_1-HE 1197 chr2R 17636053 17636090 chr2R 17636155 17636192 13 102 8.0 3.5 5.8 1.9 139 chr2R 17636053 intron CG10936 - chr2R 17636122 intron CG10936 - chr2R 17636192 intron CG10936 - chr2R_13_17635001 chr2R_17635001 EF39_1-HE 1198 chr2R 17709959 17710012 chr2R 17710076 17710129 12 117 3.0 4.0 3.5 2.7 170 chr2R 17709959 intron CG6424 - chr2R 17710044 intron CG6424 - chr2R 17710129 intron CG6424 - chr2R_12_17710001 chr2R_17710001 EF39_1-HE 1199 chr2R 17782348 17782393 chr2R 17783577 17783622 pogo 7 1229 3.5 0.0 1.8 2.5 1274 chr2R 17782348 intergenic CG33981 -,fab1 - chr2R 17782985 intergenic not near genes chr2R 17783622 intergenic mir-31a - chr2R_7_17780001 chr2R_17780001 EF39_1-HE 1200 chr2R 17783999 17784057 chr2R 17784266 17784323 pogo 18 266 5.0 4.0 4.5 3.3 324 chr2R 17783999 intergenic mir-31a - chr2R 17784161 intergenic mir-31a - chr2R 17784323 intergenic mir-31a - chr2R_18_17780001 chr2R_17780001 EF39_1-HE 1201 chr2R 17807929 17807960 chr2R 17808053 17808084 12 124 6.5 5.5 6.0 1.7 155 chr2R 17807929 intron grh + chr2R 17808006 intron grh + chr2R 17808084 intron grh + chr2R_12_17805001 chr2R_17805001 EF39_1-HE 1202 chr2R 17849795 17849831 chr2R 17849978 17850014 9 183 1.5 2.0 1.8 3.2 219 chr2R 17849795 intron olf186-F + chr2R 17849904 intron olf186-F + chr2R 17850014 intron olf186-F + chr2R_9_17845001 chr2R_17845001 EF39_1-HE 1203 chr2R 17898720 17898771 chr2R 17898835 17898886 18 114 3.5 5.5 4.5 3.3 166 chr2R 17898720 intron Elk + chr2R 17898803 intron Elk + chr2R 17898886 intron Elk + chr2R_18_17895001 chr2R_17895001 EF39_1-HE 1204 chr2R 17904997 17905038 chr2R 17905230 17905278 17 238 6.0 4.0 5.0 2.8 281 chr2R 17904997 intron Elk + chr2R 17905138 intron Elk + chr2R 17905278 intron Elk + chr2R_17_17905001 chr2R_17905001 EF39_1-HE 1205 chr2R 17911749 17911791 chr2R 17911880 17911922 15 131 2.0 5.0 3.5 3.3 173 chr2R 17911749 intron Elk + chr2R 17911836 intron Elk + chr2R 17911922 intron Elk + chr2R_15_17910001 chr2R_17910001 EF39_1-HE 1206 chr2R 17920272 17920310 chr2R 17920500 17920538 11 228 4.5 3.0 3.8 2.3 266 chr2R 17920272 intron Elk + chr2R 17920405 intron Elk + chr2R 17920538 intron Elk + chr2R_11_17920001 chr2R_17920001 EF39_1-HE 1207 chr2R 17937495 17937547 chr2R 17937601 17937653 14 106 3.0 4.0 3.5 3.1 158 chr2R 17937495 intergenic not near genes chr2R 17937574 intergenic not near genes chr2R 17937653 intergenic not near genes chr2R_14_17935001 chr2R_17935001 EF39_1-HE 1208 chr2R 18045677 18045695 chr2R 18046055 18046073 jockey 5 378 3.5 5.5 4.5 0.9 396 chr2R 18045677 intergenic not near genes chr2R 18045875 intergenic not near genes chr2R 18046073 intergenic CG5767 - chr2R_5_18045001 chr2R_18045001 EF39_1-HE 1209 chr2R 18074580 18074618 chr2R 18074682 18074720 12 102 6.5 4.0 5.2 1.9 140 chr2R 18074580 intron CG34386 + chr2R 18074650 intron CG34386 + chr2R 18074720 intron CG34386 + chr2R_12_18070001 chr2R_18070001 EF39_1-HE 1210 chr2R 18075743 18075954 chr2R 18075854 18076074 24 111 12.5 2.0 7.2 2.9 331 chr2R 18075743 intron CG34386 + chr2R 18075908 intron CG34386 + chr2R 18076074 intron CG34386 + chr2R_24_18075001 chr2R_18075001 EF39_1-HE 1211 chr2R 18075959 18075987 chr2R 18076079 18076106 10 118 6.0 6.5 6.2 1.4 147 chr2R 18075959 intron CG34386 + chr2R 18076032 intron CG34386 + chr2R 18076106 intron CG34386 + chr2R_10_18075001 chr2R_18075001 EF39_1-HE 1212 chr2R 18075992 18076002 chr2R 18076112 18076122 4 120 4.0 11.5 7.8 0.5 130 chr2R 18075992 intron CG34386 + chr2R 18076057 intron CG34386 + chr2R 18076122 intron CG34386 + chr2R_4_18075001 chr2R_18075001 EF39_1-HE 1213 chr2R 18111660 18111708 chr2R 18115554 18115602 F-element 7 3894 4.0 0.0 2.0 2.3 3942 chr2R 18111660 intergenic not near genes chr2R 18113631 intergenic not near genes chr2R 18115602 intergenic not near genes chr2R_7_18110001 chr2R_18110001 EF39_1-HE 1214 chr2R 18127492 18127539 chr2R 18127604 18127651 16 112 4.0 1.0 2.5 4.6 159 chr2R 18127492 intron Spn55B + chr2R 18127572 intron Spn55B + chr2R 18127651 intron Spn55B + chr2R_16_18125001 chr2R_18125001 EF39_1-HE 1215 chr2R 18189586 18189641 chr2R 18189699 18189756 7 115 1.5 1.5 1.5 2.8 170 chr2R 18189586 intron,3` UTR CG33958 -,CG14500 + chr2R 18189671 intron CG33958 - chr2R 18189756 intron CG33958 - chr2R_7_18185001 chr2R_18185001 EF39_1-HE 1216 chr2R 18233987 18234031 chr2R 18234100 18234145 23 112 8.5 7.5 8.0 2.6 158 chr2R 18233987 5` UTR fj + chr2R 18234066 5` UTR fj + chr2R 18234145 exon fj + chr2R_23_18230001 chr2R_18230001 EF39_1-HE 1217 chr2R 18263112 18263164 chr2R 18263227 18263279 16 114 2.5 5.5 4.0 3.2 167 chr2R 18263112 intergenic not near genes chr2R 18263196 intergenic not near genes chr2R 18263279 intergenic not near genes chr2R_16_18260001 chr2R_18260001 EF39_1-HE 1218 chr2R 18296862 18296919 chr2R 18296964 18297024 10 104 1.5 1.5 1.5 4.0 162 chr2R 18296862 intron sbb - chr2R 18296943 intron sbb - chr2R 18297024 intron sbb - chr2R_10_18295001 chr2R_18295001 EF39_1-HE 1219 chr2R 18343553 18343606 chr2R 18343657 18343710 12 102 2.5 1.0 1.8 4.3 157 chr2R 18343553 intron sbb - chr2R 18343632 intron sbb - chr2R 18343710 intron sbb - chr2R_12_18340001 chr2R_18340001 EF39_1-HE 1220 chr2R 18358367 18358416 chr2R 18372605 18372654 roo 9 14238 4.0 4.5 4.2 1.7 14287 chr2R 18358367 intergenic not near genes chr2R 18365510 intergenic not near genes chr2R 18372654 intergenic not near genes chr2R_9_18365001 chr2R_18365001 EF39_1-HE 1221 chr2R 18385710 18385760 chr2R 18386191 18386241 5 481 0.5 1.0 0.8 2.8 531 chr2R 18385710 intergenic CG15067 - chr2R 18385976 intergenic CG15067 - chr2R 18386241 intergenic IM2 + chr2R_5_18385001 chr2R_18385001 EF39_1-HE 1222 chr2R 18402807 18402964 chr2R 18402910 18403069 9 104 0.0 0.0 0.0 9.0 262 chr2R 18402807 intergenic GstE4 + chr2R 18402938 intergenic GstE4 + chr2R 18403069 intergenic GstE4 + chr2R_9_18400001 chr2R_18400001 EF39_1-HE 1223 chr2R 18405730 18405773 chr2R 18405836 18405879 5 106 2.5 0.0 1.2 2.3 149 chr2R 18405730 intergenic GstE6 +,GstE5 + chr2R 18405804 intergenic GstE6 +,GstE5 + chr2R 18405879 intergenic GstE6 + chr2R_5_18405001 chr2R_18405001 EF39_1-HE 1224 chr2R 18463037 18463094 chr2R 18463141 18463198 21 102 4.5 3.5 4.0 4.2 161 chr2R 18463037 intron CG30116 - chr2R 18463118 intron CG30116 - chr2R 18463198 intron CG30116 - chr2R_21_18460001 chr2R_18460001 EF39_1-HE 1225 chr2R 18463672 18463687 chr2R 18463799 18463814 4 127 7.5 4.0 5.8 0.6 142 chr2R 18463672 intron CG30116 - chr2R 18463743 intron CG30116 - chr2R 18463814 intron CG30116 - chr2R_4_18460001 chr2R_18460001 EF39_1-HE 1226 chr2R 18481549 18481556 chr2R 18481653 18481659 4 104 3.5 0.0 1.8 1.4 110 chr2R 18481549 intron CG30116 - chr2R 18481604 intron CG30116 - chr2R 18481659 intron CG30116 - chr2R_4_18480001 chr2R_18480001 EF39_1-HE 1227 chr2R 18487817 18487829 chr2R 18495294 18495306 blood 6 7477 5.0 2.0 3.5 1.3 7489 chr2R 18487817 intron CG30116 - chr2R 18491562 intron CG30116 - chr2R 18495306 intron CG30116 - chr2R_6_18490001 chr2R_18490001 EF39_1-HE 1228 chr2R 18510880 18510927 chr2R 18511055 18511102 4 174 2.5 0.0 1.2 1.8 222 chr2R 18510880 intergenic not near genes chr2R 18510991 intergenic not near genes chr2R 18511102 intergenic not near genes chr2R_4_18510001 chr2R_18510001 EF39_1-HE 1229 chr2R 18515319 18515337 chr2R 18515437 18515455 4 118 6.5 3.0 4.8 0.7 136 chr2R 18515319 intron CG43066 + chr2R 18515387 intron CG43066 + chr2R 18515455 intron CG43066 + chr2R_4_18515001 chr2R_18515001 EF39_1-HE 1230 chr2R 18516000 18516053 chr2R 18516115 18516168 6 114 1.5 0.0 0.8 3.3 168 chr2R 18516000 intron CG43066 + chr2R 18516084 intron CG43066 + chr2R 18516168 intron CG43066 + chr2R_6_18515001 chr2R_18515001 EF39_1-HE 1231 chr2R 18519921 18519964 chr2R 18520024 18520067 26 103 8.0 4.0 6.0 3.7 146 chr2R 18519921 intron CG43066 + chr2R 18519994 intron CG43066 + chr2R 18520067 intron CG43066 + chr2R_26_18515001 chr2R_18515001 EF39_1-HE 1232 chr2R 18526884 18526901 chr2R 18527001 18527018 6 117 5.5 3.5 4.5 1.1 134 chr2R 18526884 intergenic CG43066 + chr2R 18526951 intergenic CG10924 + chr2R 18527018 intergenic CG10924 + chr2R_6_18525001 chr2R_18525001 EF39_1-HE 1233 chr2R 18575770 18575819 chr2R 18581984 18582033 3S18 11 6197 3.5 2.5 3.0 2.8 6263 chr2R 18575770 intron GEFmeso - chr2R 18578902 intron GEFmeso - chr2R 18582033 intron GEFmeso - chr2R_11_18575001 chr2R_18575001 EF39_1-HE 1234 chr2R 18590842 18590877 chr2R 18600019 18600055 roo 8 9178 3.5 4.0 3.8 1.7 9213 chr2R 18590842 intron GEFmeso - chr2R 18595448 intron GEFmeso - chr2R 18600055 intron GEFmeso - chr2R_8_18595001 chr2R_18595001 EF39_1-HE 1235 chr2R 18646388 18646434 chr2R 18646559 18646600 13 167 1.5 3.0 2.2 4.1 212 chr2R 18646388 intron SP2637 - chr2R 18646494 intron SP2637 - chr2R 18646600 intron SP2637 - chr2R_13_18645001 chr2R_18645001 EF39_1-HE 1236 chr2R 18690431 18690478 chr2R 18690566 18690613 14 135 2.5 7.5 5.0 2.3 182 chr2R 18690431 intron Sik3 + chr2R 18690522 intron Sik3 + chr2R 18690613 intron Sik3 + chr2R_14_18690001 chr2R_18690001 EF39_1-HE 1237 chr2R 18714622 18714645 chr2R 18714750 18714773 9 128 0.0 3.5 1.8 3.2 151 chr2R 18714622 intergenic not near genes chr2R 18714698 intergenic not near genes chr2R 18714773 intergenic not near genes chr2R_9_18710001 chr2R_18710001 EF39_1-HE 1238 chr2R 18738187 18738238 chr2R 18738289 18738340 10 98 0.5 3.0 1.8 3.6 153 chr2R 18738187 intron Hs3st-A + chr2R 18738264 intron Hs3st-A + chr2R 18738340 intron Hs3st-A + chr2R_10_18735001 chr2R_18735001 EF39_1-HE 1239 chr2R 18769630 18769737 chr2R 18769894 18769947 8 237 0.0 1.5 0.8 4.4 317 chr2R 18769630 intron Mctp + chr2R 18769788 intron Mctp + chr2R 18769947 intron Mctp + chr2R_8_18765001 chr2R_18765001 EF39_1-HE 1240 chr2R 18808136 18808185 chr2R 18808238 18808287 8 102 2.0 4.5 3.2 1.9 151 chr2R 18808136 intergenic CG15096 - chr2R 18808212 intergenic CG15096 - chr2R 18808287 intergenic CG15096 - chr2R_8_18805001 chr2R_18805001 EF39_1-HE 1241 chr2R 18857390 18857400 chr2R 18857492 18857502 6 102 3.5 3.0 3.2 1.4 112 chr2R 18857390 exon Jheh2 - chr2R 18857446 intron Jheh2 - chr2R 18857502 intron Jheh2 - chr2R_6_18855001 chr2R_18855001 EF39_1-HE 1242 chr2R 18862328 18862404 chr2R 18862471 18862514 5 137 0.0 0.0 0.0 5.0 186 chr2R 18862328 intergenic Jheh3 - chr2R 18862421 intergenic Jheh3 -,CG43069 + chr2R 18862514 intergenic CG43069 +,Jheh3 - chr2R_5_18860001 chr2R_18860001 EF39_1-HE 1243 chr2R 18865722 18865776 chr2R 18865833 18865887 11 111 2.0 6.0 4.0 2.2 165 chr2R 18865722 intergenic Dpt + chr2R 18865804 5` UTR Dpt + chr2R 18865887 exon Dpt + chr2R_11_18865001 chr2R_18865001 EF39_1-HE 1244 chr2R 18876608 18876627 chr2R 18877012 18877032 9 405 2.0 1.0 1.5 3.6 424 chr2R 18876608 intergenic not near genes chr2R 18876820 intergenic not near genes chr2R 18877032 intergenic not near genes chr2R_9_18875001 chr2R_18875001 EF39_1-HE 1245 chr2R 18921637 18921683 chr2R 18921758 18921808 15 122 3.0 5.5 4.2 2.9 171 chr2R 18921637 intron sano + chr2R 18921722 intron sano + chr2R 18921808 intron sano + chr2R_15_18920001 chr2R_18920001 EF39_1-HE 1246 chr2R 18926478 18926529 chr2R 18926591 18926642 15 113 4.0 5.5 4.8 2.6 164 chr2R 18926478 intron sano + chr2R 18926560 intron sano + chr2R 18926642 intron sano + chr2R_15_18925001 chr2R_18925001 EF39_1-HE 1247 chr2R 18937729 18937757 chr2R 18937845 18937873 5 116 6.0 2.5 4.2 1.0 144 chr2R 18937729 intron sano + chr2R 18937801 intron sano + chr2R 18937873 intron sano + chr2R_5_18935001 chr2R_18935001 EF39_1-HE 1248 chr2R 18937769 18937771 chr2R 18937830 18937885 4 102 2.5 1.5 2.0 1.3 116 chr2R 18937769 intron sano + chr2R 18937827 intron sano + chr2R 18937885 intron sano + chr2R_4_18935001 chr2R_18935001 EF39_1-HE 1249 chr2R 18948058 18948086 chr2R 18948170 18948195 5 111 3.0 8.5 5.8 0.7 137 chr2R 18948058 intron sano + chr2R 18948126 intron sano + chr2R 18948195 intron sano + chr2R_5_18945001 chr2R_18945001 EF39_1-HE 1250 chr2R 18988862 18989046 chr2R 18988974 18989150 21 105 1.5 1.5 1.5 8.4 288 chr2R 18988862 intron tn + chr2R 18989006 intron tn + chr2R 18989150 intron tn + chr2R_21_18985001 chr2R_18985001 EF39_1-HE 1251 chr2R 19026024 19026054 chr2R 19026151 19026180 8 131 4.5 4.0 4.2 1.5 156 chr2R 19026024 intron 5-HT1B - chr2R 19026102 intron 5-HT1B - chr2R 19026180 intron 5-HT1B - chr2R_8_19025001 chr2R_19025001 EF39_1-HE 1252 chr2R 19040709 19040748 chr2R 19040815 19040854 14 106 0.0 6.0 3.0 3.5 145 chr2R 19040709 intergenic not near genes chr2R 19040782 intergenic not near genes chr2R 19040854 intergenic not near genes chr2R_14_19040001 chr2R_19040001 EF39_1-HE 1253 chr2R 19042669 19042695 chr2R 19042783 19042810 7 112 12.5 6.5 9.5 0.7 141 chr2R 19042669 intergenic not near genes chr2R 19042740 intergenic not near genes chr2R 19042810 intergenic not near genes chr2R_7_19040001 chr2R_19040001 EF39_1-HE 1254 chr2R 19059465 19059523 chr2R 19059568 19059626 13 102 3.5 3.5 3.5 2.9 161 chr2R 19059465 5` UTR CG15109 + chr2R 19059546 intron CG15109 + chr2R 19059626 5` UTR CG15109 + chr2R_13_19055001 chr2R_19055001 EF39_1-HE 1255 chr2R 19067697 19067744 chr2R 19067799 19067846 7 102 1.5 2.5 2.0 2.3 149 chr2R 19067697 intron 5-HT1A + chr2R 19067772 intron 5-HT1A + chr2R 19067846 intron 5-HT1A + chr2R_7_19065001 chr2R_19065001 EF39_1-HE 1256 chr2R 19104512 19104555 chr2R 19104631 19104674 16 119 4.0 2.0 3.0 4.0 162 chr2R 19104512 intron 5-HT1A + chr2R 19104593 intron 5-HT1A + chr2R 19104674 intron 5-HT1A + chr2R_16_19100001 chr2R_19100001 EF39_1-HE 1257 chr2R 19178940 19178965 chr2R 19179043 19179068 4 103 1.0 1.5 1.2 1.8 128 chr2R 19178940 intron hppy + chr2R 19179004 intron hppy + chr2R 19179068 intron hppy + chr2R_4_19175001 chr2R_19175001 EF39_1-HE 1258 chr2R 19221691 19221723 chr2R 19221796 19221828 16 105 9.0 0.5 4.8 2.8 137 chr2R 19221691 intron hppy + chr2R 19221760 intron hppy + chr2R 19221828 intron hppy + chr2R_16_19220001 chr2R_19220001 EF39_1-HE 1259 chr2R 19284388 19284441 chr2R 19289029 19289082 11 4640 1.5 4.0 2.8 2.9 4694 chr2R 19284388 intergenic CG10476 -,CG11906 - chr2R 19286735 intergenic CG10474 - chr2R 19289082 intergenic CG18607 +,CG18606 + chr2R_11_19285001 chr2R_19285001 EF39_1-HE 1260 chr2R 19322513 19322567 chr2R 19322620 19322666 11 106 0.0 3.0 1.5 4.4 153 chr2R 19322513 intron Rgk1 - chr2R 19322590 intron Rgk1 - chr2R 19322666 intron Rgk1 - chr2R_11_19320001 chr2R_19320001 EF39_1-HE 1261 chr2R 19330325 19330368 chr2R 19330445 19330478 14 119 2.0 5.5 3.8 2.9 153 chr2R 19330325 intron Rgk1 - chr2R 19330402 intron Rgk1 - chr2R 19330478 intron Rgk1 - chr2R_14_19330001 chr2R_19330001 EF39_1-HE 1262 chr2R 19349758 19349793 chr2R 19349879 19349914 5 120 2.0 1.5 1.8 1.8 156 chr2R 19349758 5` UTR Rgk1 - chr2R 19349836 5` UTR Rgk1 - chr2R 19349914 intron Rgk1 - chr2R_5_19345001 chr2R_19345001 EF39_1-HE 1263 chr2R 19536317 19536355 chr2R 19536427 19536465 12 109 3.0 3.5 3.2 2.9 148 chr2R 19536317 intron sm - chr2R 19536391 intron sm - chr2R 19536465 intron sm - chr2R_12_19535001 chr2R_19535001 EF39_1-HE 1264 chr2R 19543048 19543102 chr2R 19543159 19543213 17 110 5.0 4.5 4.8 2.9 165 chr2R 19543048 intron sm - chr2R 19543130 intron sm - chr2R 19543213 intron sm - chr2R_17_19540001 chr2R_19540001 EF39_1-HE 1265 chr2R 19572202 19572259 chr2R 19572308 19572365 21 105 5.0 2.0 3.5 4.7 163 chr2R 19572202 intron sm - chr2R 19572284 intron sm - chr2R 19572365 intron sm - chr2R_21_19570001 chr2R_19570001 EF39_1-HE 1266 chr2R 19645910 19645955 chr2R 19646020 19646065 17 111 5.5 7.0 6.2 2.4 155 chr2R 19645910 intergenic not near genes chr2R 19645988 intergenic CG15905 - chr2R 19646065 intergenic CG15905 - chr2R_17_19645001 chr2R_19645001 EF39_1-HE 1267 chr2R 19699870 19699929 chr2R 19699981 19700040 9 111 0.5 2.0 1.2 4.1 170 chr2R 19699870 intergenic Obp56c - chr2R 19699955 intergenic Obp56c - chr2R 19700040 3` UTR Obp56c - chr2R_9_19695001 chr2R_19695001 EF39_1-HE 1268 chr2R 19776569 19776619 chr2R 19779918 19779968 jockey 10 3349 4.0 0.5 2.2 3.1 3399 chr2R 19776569 intergenic not near genes chr2R 19778268 intergenic not near genes chr2R 19779968 intergenic not near genes chr2R_10_19775001 chr2R_19775001 EF39_1-HE 1269 chr2R 19806999 19807055 chr2R 19807120 19807176 18 118 2.5 3.0 2.8 4.7 177 chr2R 19806999 intergenic not near genes chr2R 19807088 intergenic not near genes chr2R 19807176 intergenic not near genes chr2R_18_19805001 chr2R_19805001 EF39_1-HE 1270 chr2R 19840517 19840577 chr2R 19840635 19840695 9 118 3.0 2.5 2.8 2.4 178 chr2R 19840517 intergenic not near genes chr2R 19840606 intergenic not near genes chr2R 19840695 intergenic not near genes chr2R_9_19840001 chr2R_19840001 EF39_1-HE 1271 chr2R 19869560 19869606 chr2R 19869664 19869710 8 104 6.0 4.5 5.2 1.3 150 chr2R 19869560 intergenic CR44460 + chr2R 19869635 intergenic CR44460 + chr2R 19869710 intergenic CR44460 + chr2R_8_19865001 chr2R_19865001 EF39_1-HE 1272 chr2R 19914826 19914872 chr2R 19922262 19922310 mdg1 9 7437 2.0 3.0 2.5 2.6 7484 chr2R 19914826 intergenic not near genes chr2R 19918568 intergenic not near genes chr2R 19922310 intergenic not near genes chr2R_9_19915001 chr2R_19915001 EF39_1-HE 1273 chr2R 19957405 19957462 chr2R 19962633 19962690 copia 22 5227 4.0 3.0 3.5 4.9 5285 chr2R 19957405 intergenic CG44623 + chr2R 19960048 intergenic not near genes chr2R 19962690 intergenic not near genes chr2R_22_19960001 chr2R_19960001 EF39_1-HE 1274 chr2R 20031888 20031925 chr2R 20032010 20032047 9 122 7.0 3.0 5.0 1.5 159 chr2R 20031888 intergenic not near genes chr2R 20031968 intergenic not near genes chr2R 20032047 intergenic not near genes chr2R_9_20030001 chr2R_20030001 EF39_1-HE 1275 chr2R 20045992 20046036 chr2R 20046105 20046149 9 112 3.0 2.5 2.8 2.4 157 chr2R 20045992 intergenic not near genes chr2R 20046070 intergenic not near genes chr2R 20046149 intergenic not near genes chr2R_9_20045001 chr2R_20045001 EF39_1-HE 1276 chr2R 20057182 20057205 chr2R 20057306 20057329 6 124 3.5 0.5 2.0 2.0 147 chr2R 20057182 intergenic not near genes chr2R 20057256 intergenic not near genes chr2R 20057329 intergenic not near genes chr2R_6_20055001 chr2R_20055001 EF39_1-HE 1277 chr2R 20069209 20069255 chr2R 20071874 20071919 opus 6 2664 2.0 2.0 2.0 2.0 2710 chr2R 20069209 intergenic not near genes chr2R 20070564 intergenic not near genes chr2R 20071919 intergenic not near genes chr2R_6_20070001 chr2R_20070001 EF39_1-HE 1278 chr2R 20079176 20079228 chr2R 20079282 20079332 13 106 2.0 2.5 2.2 4.1 156 chr2R 20079176 intergenic not near genes chr2R 20079254 intergenic not near genes chr2R 20079332 intergenic not near genes chr2R_13_20075001 chr2R_20075001 EF39_1-HE 1279 chr2R 20087971 20088020 chr2R 20088105 20088154 8 132 1.0 1.5 1.2 3.6 183 chr2R 20087971 intergenic not near genes chr2R 20088062 intergenic not near genes chr2R 20088154 intergenic not near genes chr2R_8_20085001 chr2R_20085001 EF39_1-HE 1280 chr2R 20142637 20142684 chr2R 20142761 20142808 15 124 2.5 3.5 3.0 3.8 171 chr2R 20142637 intergenic not near genes chr2R 20142722 intergenic not near genes chr2R 20142808 intergenic not near genes chr2R_15_20140001 chr2R_20140001 EF39_1-HE 1281 chr2R 20379131 20379139 chr2R 20379240 20379248 4 109 2.5 0.5 1.5 1.6 117 chr2R 20379131 intergenic not near genes chr2R 20379190 intergenic not near genes chr2R 20379248 intergenic not near genes chr2R_4_20375001 chr2R_20375001 EF39_1-HE 1282 chr2R 20382317 20382358 chr2R 20382428 20382469 6 111 3.5 5.5 4.5 1.1 152 chr2R 20382317 intergenic not near genes chr2R 20382393 intergenic not near genes chr2R 20382469 intergenic not near genes chr2R_6_20380001 chr2R_20380001 EF39_1-HE 1283 chr2R 20384522 20384548 chr2R 20384633 20384659 11 111 1.5 5.5 3.5 2.4 137 chr2R 20384522 intergenic not near genes chr2R 20384590 intergenic not near genes chr2R 20384659 intergenic not near genes chr2R_11_20380001 chr2R_20380001 EF39_1-HE 1284 chr2R 20413293 20413318 chr2R 20413403 20413428 11 110 8.5 6.5 7.5 1.3 135 chr2R 20413293 intergenic not near genes chr2R 20413360 intergenic not near genes chr2R 20413428 intergenic not near genes chr2R_11_20410001 chr2R_20410001 EF39_1-HE 1285 chr2R 20422546 20422590 chr2R 20422651 20422695 8 105 9.5 4.0 6.8 1.0 149 chr2R 20422546 intergenic not near genes chr2R 20422620 intergenic not near genes chr2R 20422695 intergenic not near genes chr2R_8_20420001 chr2R_20420001 EF39_1-HE 1286 chr2R 20432461 20432490 chr2R 20432575 20432612 11 120 4.5 6.0 5.2 1.8 151 chr2R 20432461 intron CG12484 + chr2R 20432536 intron CG12484 + chr2R 20432612 intron CG12484 + chr2R_11_20430001 chr2R_20430001 EF39_1-HE 1287 chr2R 20457431 20457482 chr2R 20457542 20457593 11 110 2.5 5.0 3.8 2.3 162 chr2R 20457431 intron CG12484 + chr2R 20457512 intron CG12484 + chr2R 20457593 intron CG12484 + chr2R_11_20455001 chr2R_20455001 EF39_1-HE 1288 chr2R 20499398 20499414 chr2R 20499675 20499691 7 276 0.0 3.5 1.8 2.5 293 chr2R 20499398 intergenic not near genes chr2R 20499544 intergenic not near genes chr2R 20499691 intergenic not near genes chr2R_7_20495001 chr2R_20495001 EF39_1-HE 1289 chr2R 20555306 20555318 chr2R 20555416 20555428 4 110 1.0 1.0 1.0 2.0 122 chr2R 20555306 intergenic not near genes chr2R 20555367 intergenic not near genes chr2R 20555428 intergenic not near genes chr2R_4_20555001 chr2R_20555001 EF39_1-HE 1290 chr2R 20572568 20572577 chr2R 20572684 20572693 4 116 1.0 0.5 0.8 2.2 125 chr2R 20572568 intron qsm - chr2R 20572630 intron qsm - chr2R 20572693 intron qsm - chr2R_4_20570001 chr2R_20570001 EF39_1-HE 1291 chr2R 20616911 20616940 chr2R 20617020 20617034 12 108 6.0 3.0 4.5 2.2 123 chr2R 20616911 intron Hil - chr2R 20616972 intron Hil - chr2R 20617034 intron Hil - chr2R_12_20615001 chr2R_20615001 EF39_1-HE 1292 chr2R 20739416 20739467 chr2R 20744210 20744261 F-element 16 4794 5.5 1.5 3.5 3.6 4845 chr2R 20739416 intron dpr + chr2R 20741838 intron dpr + chr2R 20744261 intron dpr + chr2R_16_20740001 chr2R_20740001 EF39_1-HE 1293 chr2R 20747891 20747936 chr2R 20748264 20748309 8 373 0.0 5.5 2.8 2.1 418 chr2R 20747891 intron dpr + chr2R 20748100 intron dpr + chr2R 20748309 intron dpr + chr2R_8_20745001 chr2R_20745001 EF39_1-HE 1294 chr2R 20752760 20752806 chr2R 20752875 20752921 9 115 5.5 5.0 5.2 1.5 161 chr2R 20752760 exon CG34202 + chr2R 20752840 exon CG34202 + chr2R 20752921 exon CG34202 + chr2R_9_20750001 chr2R_20750001 EF39_1-HE 1295 chr2R 20759788 20759815 chr2R 20759887 20759917 6 101 0.0 4.5 2.2 1.9 129 chr2R 20759788 intergenic not near genes chr2R 20759852 intergenic not near genes chr2R 20759917 intergenic not near genes chr2R_6_20755001 chr2R_20755001 EF39_1-HE 1296 chr2R 20783289 20783316 chr2R 20788087 20788114 F-element 6 4798 3.5 5.5 4.5 1.1 4825 chr2R 20783289 intergenic not near genes chr2R 20785702 intergenic not near genes chr2R 20788114 intergenic CG43666 - chr2R_6_20785001 chr2R_20785001 EF39_1-HE 1297 chr2R 20838689 20838697 chr2R 20838796 20838804 4 107 0.0 2.0 1.0 2.0 115 chr2R 20838689 5` UTR CR44667 + chr2R 20838746 intergenic CR44667 + chr2R 20838804 intergenic CR44667 + chr2R_4_20835001 chr2R_20835001 EF39_1-HE 1298 chr2R 20865480 20865530 chr2R 20865583 20865633 14 103 7.5 10.0 8.8 1.4 153 chr2R 20865480 intron CG15227 + chr2R 20865556 intron CG15227 + chr2R 20865633 intron CG15227 + chr2R_14_20865001 chr2R_20865001 EF39_1-HE 1299 chr2R 20869744 20869768 chr2R 20869988 20870012 8 244 3.0 0.5 1.8 2.9 268 chr2R 20869744 intergenic IM4 - chr2R 20869878 intergenic not near genes chr2R 20870012 intergenic IM14 + chr2R_8_20865001 chr2R_20865001 EF39_1-HE 1300 chr2R 20895228 20895236 chr2R 20895396 20895404 4 168 4.5 2.0 3.2 1.0 176 chr2R 20895228 intron otp - chr2R 20895316 intron otp - chr2R 20895404 intron otp - chr2R_4_20895001 chr2R_20895001 EF39_1-HE 1301 chr2R 20935801 20935834 chr2R 20935947 20935980 16 146 5.5 7.5 6.5 2.1 179 chr2R 20935801 exon Rx + chr2R 20935890 intron Rx + chr2R 20935980 intron Rx + chr2R_16_20935001 chr2R_20935001 EF39_1-HE 1302 chr2R 20937519 20937593 chr2R 20937655 20937713 18 128 0.5 6.0 3.2 4.3 194 chr2R 20937519 intergenic Rx + chr2R 20937616 intergenic not near genes chr2R 20937713 intergenic not near genes chr2R_18_20935001 chr2R_20935001 EF39_1-HE 1303 chr2R 20978336 20978367 chr2R 20985039 20985069 9 6702 26.0 16.0 21.0 0.4 6733 chr2R 20978336 5` UTR CG15650 - chr2R 20981702 exon CG9313 + chr2R 20985069 exon CG15651 - chr2R_9_20980001 chr2R_20980001 EF39_1-HE 1304 chr2R 21027646 21027679 chr2R 21027766 21027799 6 118 1.0 5.0 3.0 1.5 153 chr2R 21027646 intergenic not near genes chr2R 21027722 intergenic not near genes chr2R 21027799 intergenic not near genes chr2R_6_21025001 chr2R_21025001 EF39_1-HE 1305 chr2R 21031731 21031776 chr2R 21031846 21031891 6 115 2.0 4.0 3.0 1.5 160 chr2R 21031731 intergenic not near genes chr2R 21031811 intergenic not near genes chr2R 21031891 intergenic not near genes chr2R_6_21030001 chr2R_21030001 EF39_1-HE 1306 chr2R 21116472 21116504 chr2R 21116613 21116645 11 141 1.5 0.5 1.0 5.5 173 chr2R 21116472 intron ktub + chr2R 21116558 intron ktub + chr2R 21116645 intron ktub + chr2R_11_21115001 chr2R_21115001 EF39_1-HE 1307 chr2R 21136891 21136914 chr2R 21137001 21137022 5 110 1.5 0.0 0.8 2.8 131 chr2R 21136891 intron Magi - chr2R 21136956 intron Magi - chr2R 21137022 intron Magi - chr2R_5_21135001 chr2R_21135001 EF39_1-HE 1308 chr2R 21237373 21237429 chr2R 21237675 21237731 9 302 1.0 6.0 3.5 2.0 358 chr2R 21237373 intron ASPP - chr2R 21237552 intron ASPP - chr2R 21237731 intron ASPP - chr2R_9_21235001 chr2R_21235001 EF39_1-HE 1309 chr2R 21252362 21252408 chr2R 21252467 21252513 18 105 4.5 8.0 6.2 2.5 151 chr2R 21252362 intergenic not near genes chr2R 21252438 intergenic not near genes chr2R 21252513 intergenic not near genes chr2R_18_21250001 chr2R_21250001 EF39_1-HE 1310 chr2R 21258456 21258502 chr2R 21258558 21258604 13 102 1.5 8.0 4.8 2.2 148 chr2R 21258456 intron Rgk3 + chr2R 21258530 intron Rgk3 + chr2R 21258604 intron Rgk3 + chr2R_13_21255001 chr2R_21255001 EF39_1-HE 1311 chr2R 21285406 21285434 chr2R 21285509 21285537 14 103 8.5 7.5 8.0 1.6 131 chr2R 21285406 3` UTR,3` UTR MFS16 +,CG10505 - chr2R 21285472 3` UTR,3` UTR MFS16 +,CG10505 - chr2R 21285537 3` UTR,3` UTR MFS16 +,CG10505 - chr2R_14_21285001 chr2R_21285001 EF39_1-HE 1312 chr2R 21350840 21350876 chr2R 21350942 21350963 4 98 4.5 0.0 2.2 1.2 123 chr2R 21350840 intergenic CG17974 - chr2R 21350902 intergenic CG17974 - chr2R 21350963 intergenic CG17974 - chr2R_4_21350001 chr2R_21350001 EF39_1-HE 1313 chr2R 21417253 21417272 chr2R 21417379 21417392 7 126 1.5 0.0 0.8 3.9 139 chr2R 21417253 intron Sdc - chr2R 21417322 intron Sdc - chr2R 21417392 intron Sdc - chr2R_7_21415001 chr2R_21415001 EF39_1-HE 1314 chr2R 21457086 21457140 chr2R 21457262 21457316 16 176 5.0 3.5 4.2 3.1 230 chr2R 21457086 intron Sdc - chr2R 21457201 intron Sdc - chr2R 21457316 intron Sdc - chr2R_16_21455001 chr2R_21455001 EF39_1-HE 1315 chr2R 21460134 21460153 chr2R 21460256 21460275 10 122 0.0 0.0 0.0 10.0 141 chr2R 21460134 intron Sdc - chr2R 21460204 intron Sdc - chr2R 21460275 intron Sdc - chr2R_10_21460001 chr2R_21460001 EF39_1-HE 1316 chr2R 21551819 21551842 chr2R 21551972 21551994 5 153 5.5 4.0 4.8 0.9 175 chr2R 21551819 intron Egfr + chr2R 21551906 intron Egfr + chr2R 21551994 intron Egfr + chr2R_5_21550001 chr2R_21550001 EF39_1-HE 1317 chr2R 21580600 21580654 chr2R 21580725 21580779 24 124 2.5 3.0 2.8 6.3 179 chr2R 21580600 intergenic not near genes chr2R 21580690 intergenic not near genes chr2R 21580779 intergenic not near genes chr2R_24_21580001 chr2R_21580001 EF39_1-HE 1318 chr2R 21592820 21592855 chr2R 21592929 21592964 12 108 2.0 5.5 3.8 2.5 144 chr2R 21592820 intergenic not near genes chr2R 21592892 intergenic not near genes chr2R 21592964 intergenic not near genes chr2R_12_21590001 chr2R_21590001 EF39_1-HE 1319 chr2R 21601741 21601759 chr2R 21601841 21601867 6 107 1.5 3.5 2.5 1.7 126 chr2R 21601741 intergenic not near genes chr2R 21601804 intergenic not near genes chr2R 21601867 intergenic not near genes chr2R_6_21600001 chr2R_21600001 EF39_1-HE 1320 chr2R 21609074 21609085 chr2R 21609185 21609196 7 111 7.0 2.0 4.5 1.3 122 chr2R 21609074 intron CG15673 - chr2R 21609135 intron CG15673 - chr2R 21609196 intron CG15673 - chr2R_7_21605001 chr2R_21605001 EF39_1-HE 1321 chr2R 21671524 21671572 chr2R 21671628 21671676 10 104 4.0 4.5 4.2 1.9 152 chr2R 21671524 3` UTR NC2alpha + chr2R 21671600 intergenic NC2alpha +,CG15676 + chr2R 21671676 intergenic CG15676 +,NC2alpha + chr2R_10_21670001 chr2R_21670001 EF39_1-HE 1322 chr2R 21721553 21721608 chr2R 21721667 21721722 18 114 3.0 4.0 3.5 4.0 169 chr2R 21721553 intron LBR + chr2R 21721638 intron LBR + chr2R 21721722 intron LBR + chr2R_18_21720001 chr2R_21720001 EF39_1-HE 1323 chr2R 21725182 21725216 chr2R 21725284 21725318 6 102 0.5 3.0 1.8 2.1 136 chr2R 21725182 intergenic not near genes chr2R 21725250 intergenic not near genes chr2R 21725318 intergenic not near genes chr2R_6_21725001 chr2R_21725001 EF39_1-HE 1324 chr2R 21738253 21738277 chr2R 21747439 21747463 roo 6 9186 7.0 5.0 6.0 0.9 9210 chr2R 21738253 intergenic not near genes chr2R 21742858 intergenic not near genes chr2R 21747463 intergenic not near genes chr2R_6_21740001 chr2R_21740001 EF39_1-HE 1325 chr2R 21753067 21753115 chr2R 21753578 21753626 roo 23 511 1.5 5.5 3.5 5.1 559 chr2R 21753067 intergenic not near genes chr2R 21753346 intergenic not near genes chr2R 21753626 intergenic not near genes chr2R_23_21750001 chr2R_21750001 EF39_1-HE 1326 chr2R 21774677 21774709 chr2R 21774813 21774844 7 136 6.5 1.0 3.8 1.5 167 chr2R 21774677 exon CG4021 + chr2R 21774760 3` UTR CG4021 + chr2R 21774844 3` UTR CG4021 + chr2R_7_21770001 chr2R_21770001 EF39_1-HE 1327 chr2R 21835457 21835517 chr2R 21835575 21835635 15 117 3.0 1.0 2.0 5.0 178 chr2R 21835457 3` UTR CG4377 - chr2R 21835546 exon CG4377 - chr2R 21835635 exon CG4377 - chr2R_15_21835001 chr2R_21835001 EF39_1-HE 1328 chr2R 21857320 21857366 chr2R 21857436 21857483 17 116 7.5 4.0 5.8 2.5 163 chr2R 21857320 intergenic not near genes chr2R 21857402 intergenic not near genes chr2R 21857483 intergenic not near genes chr2R_17_21855001 chr2R_21855001 EF39_1-HE 1329 chr2R 21906247 21906301 chr2R 21906374 21906428 10 126 2.0 1.5 1.8 3.6 181 chr2R 21906247 intron Fili + chr2R 21906338 intron Fili + chr2R 21906428 intron Fili + chr2R_10_21905001 chr2R_21905001 EF39_1-HE 1330 chr2R 21908429 21908484 chr2R 21908535 21908590 11 106 3.5 3.0 3.2 2.6 161 chr2R 21908429 intron Fili + chr2R 21908510 intron Fili + chr2R 21908590 intron Fili + chr2R_11_21905001 chr2R_21905001 EF39_1-HE 1331 chr2R 21916795 21916809 chr2R 21916902 21916916 4 105 8.0 0.0 4.0 0.8 121 chr2R 21916795 intron Fili + chr2R 21916856 intron Fili + chr2R 21916916 intron Fili + chr2R_4_21915001 chr2R_21915001 EF39_1-HE 1332 chr2R 21946747 21946799 chr2R 21946870 21946921 6 122 0.5 6.5 3.5 1.3 174 chr2R 21946747 intergenic Fili + chr2R 21946834 intergenic not near genes chr2R 21946921 intergenic not near genes chr2R_6_21945001 chr2R_21945001 EF39_1-HE 1333 chr2R 21992395 21992428 chr2R 21992498 21992531 15 103 2.0 6.5 4.2 2.9 136 chr2R 21992395 intron CG34370 - chr2R 21992463 intron CG34370 - chr2R 21992531 intron CG34370 - chr2R_15_21990001 chr2R_21990001 EF39_1-HE 1334 chr2R 21999486 21999499 chr2R 21999596 21999610 4 111 3.0 8.5 5.8 0.6 124 chr2R 21999486 intron CG34370 - chr2R 21999548 intron CG34370 - chr2R 21999610 intron CG34370 - chr2R_4_21995001 chr2R_21995001 EF39_1-HE 1335 chr2R 21999502 21999513 chr2R 21999581 21999624 6 105 2.0 6.5 4.2 1.2 122 chr2R 21999502 intron CG34370 - chr2R 21999563 intron CG34370 - chr2R 21999624 intron CG34370 - chr2R_6_21995001 chr2R_21995001 EF39_1-HE 1336 chr2R 22004275 22004315 chr2R 22004395 22004435 5 120 3.0 3.0 3.0 1.2 160 chr2R 22004275 intron CG34370 - chr2R 22004355 intron CG34370 - chr2R 22004435 intron CG34370 - chr2R_5_22000001 chr2R_22000001 EF39_1-HE 1337 chr2R 22035519 22035572 chr2R 22035632 22035685 25 113 40.5 40.5 40.5 0.6 166 chr2R 22035519 intron,exon CG34370 -,CG9308 + chr2R 22035602 intron,3` UTR CG34370 -,CG9308 + chr2R 22035685 intron CG34370 - chr2R_25_22035001 chr2R_22035001 EF39_1-HE 1338 chr2R 22034441 22034450 chr2R 22035999 22036008 6 1558 39.5 19.5 29.5 0.2 1567 chr2R 22034441 intron CG34370 - chr2R 22035224 intron,exon CG34370 -,CG9308 + chr2R 22036008 intron CG34370 - chr2R_6_22035001 chr2R_22035001 EF39_1-HE 1339 chr2R 22036188 22036227 chr2R 22036292 22036331 8 104 3.0 5.0 4.0 1.6 143 chr2R 22036188 intron CG34370 - chr2R 22036260 intron CG34370 - chr2R 22036331 intron CG34370 - chr2R_8_22035001 chr2R_22035001 EF39_1-HE 1340 chr2R 22095015 22095071 chr2R 22095126 22095182 11 111 4.0 4.0 4.0 2.2 167 chr2R 22095015 intron CG11073 - chr2R 22095098 intron CG11073 - chr2R 22095182 intron CG11073 - chr2R_11_22095001 chr2R_22095001 EF39_1-HE 1341 chr2R 22095569 22095595 chr2R 22095674 22095701 5 105 6.5 0.5 3.5 1.1 132 chr2R 22095569 intron CG11073 - chr2R 22095635 intron CG11073 - chr2R 22095701 intron CG11073 - chr2R_5_22095001 chr2R_22095001 EF39_1-HE 1342 chr2R 22120773 22120783 chr2R 22121030 22121040 7 257 1.5 1.5 1.5 2.8 267 chr2R 22120773 intron Vrp1 - chr2R 22120906 intron Vrp1 - chr2R 22121040 intron Vrp1 - chr2R_7_22120001 chr2R_22120001 EF39_1-HE 1343 chr2R 22124283 22124331 chr2R 22124398 22124446 10 115 2.5 2.0 2.2 3.1 163 chr2R 22124283 3` UTR mei-S332 + chr2R 22124364 3` UTR mei-S332 + chr2R 22124446 intergenic mei-S332 +,GM130 - chr2R_10_22120001 chr2R_22120001 EF39_1-HE 1344 chr2R 22260106 22260166 chr2R 22260302 22260362 19 193 2.5 2.5 2.5 5.4 256 chr2R 22260106 intron dve + chr2R 22260234 intron dve + chr2R 22260362 intron dve + chr2R_19_22260001 chr2R_22260001 EF39_1-HE 1345 chr2R 22349670 22349716 chr2R 22351480 22351526 jockey 23 1810 7.0 4.0 5.5 3.5 1856 chr2R 22349670 intron Liprin-gamma - chr2R 22350598 intron Liprin-gamma - chr2R 22351526 intron Liprin-gamma - chr2R_23_22350001 chr2R_22350001 EF39_1-HE 1346 chr2R 22360362 22360370 chr2R 22360821 22360829 jockey 4 459 7.5 3.0 5.2 0.6 467 chr2R 22360362 intron Liprin-gamma - chr2R 22360596 intron Liprin-gamma - chr2R 22360829 intron Liprin-gamma - chr2R_4_22360001 chr2R_22360001 EF39_1-HE 1347 chr2R 22371758 22371792 chr2R 22371868 22371902 13 110 0.5 4.5 2.5 3.7 144 chr2R 22371758 intron Liprin-gamma - chr2R 22371830 intron Liprin-gamma - chr2R 22371902 intron Liprin-gamma - chr2R_13_22370001 chr2R_22370001 EF39_1-HE 1348 chr2R 22380336 22380389 chr2R 22380453 22380506 6 116 3.0 0.5 1.8 2.1 170 chr2R 22380336 intron wrapper + chr2R 22380421 intron wrapper + chr2R 22380506 intron wrapper + chr2R_6_22380001 chr2R_22380001 EF39_1-HE 1349 chr2R 22407605 22407616 chr2R 22407714 22407725 9 109 9.0 4.0 6.5 1.2 120 chr2R 22407605 exon CG6044 + chr2R 22407665 exon CG6044 + chr2R 22407725 exon CG6044 + chr2R_9_22405001 chr2R_22405001 EF39_1-HE 1350 chr2R 22407619 22407629 chr2R 22407713 22407738 7 105 9.0 4.0 6.5 0.9 119 chr2R 22407619 exon CG6044 + chr2R 22407678 exon CG6044 + chr2R 22407738 exon CG6044 + chr2R_7_22405001 chr2R_22405001 EF39_1-HE 1351 chr2R 22407630 22407654 chr2R 22407709 22407763 8 101 4.0 4.0 4.0 1.6 133 chr2R 22407630 exon CG6044 + chr2R 22407696 exon CG6044 + chr2R 22407763 exon CG6044 + chr2R_8_22405001 chr2R_22405001 EF39_1-HE 1352 chr2R 22440972 22440985 chr2R 22441076 22441089 5 104 12.0 14.0 13.0 0.4 117 chr2R 22440972 intergenic not near genes chr2R 22441030 intergenic not near genes chr2R 22441089 intergenic not near genes chr2R_5_22440001 chr2R_22440001 EF39_1-HE 1353 chr2R 22460356 22460405 chr2R 22460461 22460510 13 104 3.5 3.5 3.5 2.9 154 chr2R 22460356 intron CG10384 + chr2R 22460433 intron CG10384 + chr2R 22460510 intron CG10384 + chr2R_13_22460001 chr2R_22460001 EF39_1-HE 1354 chr2R 22465293 22465347 chr2R 22465512 22465571 BS 12 219 3.5 3.0 3.2 2.9 278 chr2R 22465293 intron CG10384 + chr2R 22465432 intron CG10384 + chr2R 22465571 intron CG10384 + chr2R_12_22465001 chr2R_22465001 EF39_1-HE 1355 chr2R 22505037 22505102 chr2R 22505152 22505209 21 110 0.0 5.0 2.5 6.0 172 chr2R 22505037 intron px - chr2R 22505123 intron px - chr2R 22505209 intron px - chr2R_21_22505001 chr2R_22505001 EF39_1-HE 1356 chr2R 22507424 22507445 chr2R 22507531 22507552 10 106 5.5 8.5 7.0 1.2 128 chr2R 22507424 intron px - chr2R 22507488 intron px - chr2R 22507552 intron px - chr2R_10_22505001 chr2R_22505001 EF39_1-HE 1357 chr2R 22525724 22525787 chr2R 22529305 22529376 jockey 13 3584 2.0 0.0 1.0 6.5 3652 chr2R 22525724 intron px - chr2R 22527550 intron px - chr2R 22529376 intron px - chr2R_13_22525001 chr2R_22525001 EF39_1-HE 1358 chr2R 22588131 22588158 chr2R 22588252 22588279 8 121 9.0 8.0 8.5 0.8 148 chr2R 22588131 intron dnr1 - chr2R 22588205 intron dnr1 - chr2R 22588279 intron dnr1 - chr2R_8_22585001 chr2R_22585001 EF39_1-HE 1359 chr2R 22617963 22618010 chr2R 22618997 22619045 5 1033 4.0 0.5 2.2 1.6 1082 chr2R 22617963 intron CG33143 + chr2R 22618504 intron CG33143 + chr2R 22619045 intron CG33143 + chr2R_5_22615001 chr2R_22615001 EF39_1-HE 1360 chr2R 22621529 22621562 chr2R 22621638 22621671 6 109 1.5 2.0 1.8 2.1 142 chr2R 22621529 intron CG33143 + chr2R 22621600 intron CG33143 + chr2R 22621671 intron CG33143 + chr2R_6_22620001 chr2R_22620001 EF39_1-HE 1361 chr2R 22626894 22626932 chr2R 22627002 22627040 5 108 3.0 3.0 3.0 1.2 146 chr2R 22626894 intron CG33143 + chr2R 22626967 intron CG33143 + chr2R 22627040 intron CG33143 + chr2R_5_22625001 chr2R_22625001 EF39_1-HE 1362 chr2R 22663113 22663162 chr2R 22663219 22663268 9 105 2.0 1.5 1.8 3.2 155 chr2R 22663113 3` UTR CG42566 + chr2R 22663190 3` UTR CG42566 + chr2R 22663268 intergenic CG42566 +,CG4250 + chr2R_9_22660001 chr2R_22660001 EF39_1-HE 1363 chr2R 22664681 22664703 chr2R 22664786 22664808 5 105 0.5 1.5 1.0 2.5 127 chr2R 22664681 intergenic CG4250 + chr2R 22664744 intergenic CG4250 + chr2R 22664808 intergenic CG4250 + chr2R_5_22660001 chr2R_22660001 EF39_1-HE 1364 chr2R 22774945 22774987 chr2R 22775390 22775432 jockey 5 445 1.5 1.5 1.5 2.0 487 chr2R 22774945 intron CG42260 - chr2R 22775188 intron CG42260 - chr2R 22775432 intron CG42260 - chr2R_5_22775001 chr2R_22775001 EF39_1-HE 1365 chr2R 22941343 22941397 chr2R 22941542 22941595 9 199 4.5 2.5 3.5 2.0 252 chr2R 22941343 intergenic CG3831 - chr2R 22941469 intergenic CG3831 -,CG42694 + chr2R 22941595 intergenic CG42694 +,CG3831 - chr2R_9_22940001 chr2R_22940001 EF39_1-HE 1366 chr2R 22996936 22996972 chr2R 22997049 22997085 13 113 1.5 4.5 3.0 3.2 149 chr2R 22996936 intron,intron twi +,CG9896 - chr2R 22997010 intron,intron twi +,CG9896 - chr2R 22997085 intron,intron twi +,CG9896 - chr2R_13_22995001 chr2R_22995001 EF39_1-HE 1367 chr2R 23007488 23007527 chr2R 23007585 23007631 9 103 5.0 6.0 5.5 1.4 143 chr2R 23007488 intron twi + chr2R 23007560 intron twi + chr2R 23007631 intron twi + chr2R_9_23005001 chr2R_23005001 EF39_1-HE 1368 chr2R 23029587 23029609 chr2R 23029690 23029712 8 101 10.0 7.5 8.8 0.8 125 chr2R 23029587 intron,intron twi +,CG42741 - chr2R 23029650 intron,intron twi +,CG42741 - chr2R 23029712 intron,intron twi +,CG42741 - chr2R_8_23025001 chr2R_23025001 EF39_1-HE 1369 chr2R 23041177 23041199 chr2R 23041281 23041303 15 104 8.5 18.5 13.5 1.0 126 chr2R 23041177 intron,intron twi +,CG42741 - chr2R 23041240 intron,intron twi +,CG42741 - chr2R 23041303 intron,intron twi +,CG42741 - chr2R_15_23040001 chr2R_23040001 EF39_1-HE 1370 chr2R 23045825 23045836 chr2R 23045936 23045947 4 111 0.0 13.0 6.5 0.5 122 chr2R 23045825 intron twi + chr2R 23045886 intron twi + chr2R 23045947 intron twi + chr2R_4_23045001 chr2R_23045001 EF39_1-HE 1371 chr2R 23045843 23045854 chr2R 23045934 23045965 4 106 0.0 12.5 6.2 0.6 122 chr2R 23045843 intron twi + chr2R 23045904 intron twi + chr2R 23045965 intron twi + chr2R_4_23045001 chr2R_23045001 EF39_1-HE 1372 chr2R 23053976 23054023 chr2R 23054080 23054127 10 104 6.0 0.0 3.0 2.5 151 chr2R 23053976 intergenic not near genes chr2R 23054052 intergenic not near genes chr2R 23054127 intergenic not near genes chr2R_10_23050001 chr2R_23050001 EF39_1-HE 1373 chr2R 23169851 23169901 chr2R 23169960 23170010 22 109 3.5 1.5 2.5 6.3 159 chr2R 23169851 exon CG34371 - chr2R 23169930 intron CG34371 - chr2R 23170010 intron CG34371 - chr2R_22_23165001 chr2R_23165001 EF39_1-HE 1374 chr2R 23190106 23190159 chr2R 23190264 23190317 23 157 4.5 5.0 4.8 4.0 211 chr2R 23190106 intron CG34371 - chr2R 23190212 intron CG34371 - chr2R 23190317 intron CG34371 - chr2R_23_23190001 chr2R_23190001 EF39_1-HE 1375 chr2R 23206277 23206315 chr2R 23206385 23206423 12 108 5.0 10.5 7.8 1.4 146 chr2R 23206277 intergenic not near genes chr2R 23206350 intergenic not near genes chr2R 23206423 intergenic not near genes chr2R_12_23205001 chr2R_23205001 EF39_1-HE 1376 chr2R 23254754 23254812 chr2R 23254865 23254923 20 110 3.0 2.5 2.8 5.3 169 chr2R 23254754 intergenic not near genes chr2R 23254838 intergenic not near genes chr2R 23254923 intergenic not near genes chr2R_20_23250001 chr2R_23250001 EF39_1-HE 1377 chr2R 23291303 23291334 chr2R 23291407 23291438 7 104 4.5 2.0 3.2 1.7 135 chr2R 23291303 3` UTR CR44783 - chr2R 23291370 3` UTR CR44783 - chr2R 23291438 intergenic CR44783 - chr2R_7_23290001 chr2R_23290001 EF39_1-HE 1378 chr2R 23315369 23315409 chr2R 23315567 23315593 10 196 1.5 4.5 3.0 2.5 224 chr2R 23315369 intergenic not near genes chr2R 23315481 intergenic not near genes chr2R 23315593 intergenic not near genes chr2R_10_23315001 chr2R_23315001 EF39_1-HE 1379 chr2R 23412106 23412152 chr2R 23412444 23412493 7 341 1.5 1.0 1.2 3.2 387 chr2R 23412106 intergenic CG9812 - chr2R 23412300 intergenic CG9812 - chr2R 23412493 3` UTR CG9812 - chr2R_7_23410001 chr2R_23410001 EF39_1-HE 1380 chr2R 23455349 23455409 chr2R 23455464 23455524 9 114 0.5 1.0 0.8 5.0 175 chr2R 23455349 intron CG43795 + chr2R 23455436 intron CG43795 + chr2R 23455524 intron CG43795 + chr2R_9_23455001 chr2R_23455001 EF39_1-HE 1381 chr2R 23464106 23464125 chr2R 23464213 23464232 11 106 2.5 6.0 4.2 2.1 126 chr2R 23464106 intron CG43795 + chr2R 23464169 intron CG43795 + chr2R 23464232 intron CG43795 + chr2R_11_23460001 chr2R_23460001 EF39_1-HE 1382 chr2R 23467542 23467550 chr2R 23467688 23467695 4 146 5.5 0.0 2.8 1.1 153 chr2R 23467542 intron CG43795 + chr2R 23467618 intron CG43795 + chr2R 23467695 intron CG43795 + chr2R_4_23465001 chr2R_23465001 EF39_1-HE 1383 chr2R 23487426 23487479 chr2R 23487534 23487587 11 105 1.5 2.5 2.0 3.7 161 chr2R 23487426 intron CG43795 + chr2R 23487506 intron CG43795 + chr2R 23487587 intron CG43795 + chr2R_11_23485001 chr2R_23485001 EF39_1-HE 1384 chr2R 23493648 23493695 chr2R 23493760 23493805 7 112 2.5 4.5 3.5 1.6 157 chr2R 23493648 intergenic not near genes chr2R 23493726 intergenic not near genes chr2R 23493805 intergenic not near genes chr2R_7_23490001 chr2R_23490001 EF39_1-HE 1385 chr2R 23496545 23496602 chr2R 23496799 23496857 6 255 1.0 1.5 1.2 2.7 312 chr2R 23496545 intergenic not near genes chr2R 23496701 intergenic not near genes chr2R 23496857 intergenic not near genes chr2R_6_23495001 chr2R_23495001 EF39_1-HE 1386 chr2R 23529549 23529605 chr2R 23537151 23537207 412 21 7599 3.5 3.5 3.5 4.7 7658 chr2R 23529549 intron bw - chr2R 23533378 intron bw - chr2R 23537207 exon bw - chr2R_21_23530001 chr2R_23530001 EF39_1-HE 1387 chr2R 23607016 23607192 chr2R 23607123 23607311 21 112 0.0 0.0 0.0 21.0 295 chr2R 23607016 intron CG17664 - chr2R 23607164 intron CG17664 - chr2R 23607311 intron CG17664 - chr2R_21_23605001 chr2R_23605001 EF39_1-HE 1388 chr2R 23653251 23653267 chr2R 23653361 23653377 10 110 14.5 0.0 7.2 1.2 126 chr2R 23653251 exon retn + chr2R 23653314 intron retn + chr2R 23653377 intron retn + chr2R_10_23650001 chr2R_23650001 EF39_1-HE 1389 chr2R 23663488 23663520 chr2R 23663602 23663634 14 114 0.0 5.5 2.8 3.7 146 chr2R 23663488 intron Pde8 + chr2R 23663561 intron Pde8 + chr2R 23663634 intron Pde8 + chr2R_14_23660001 chr2R_23660001 EF39_1-HE 1390 chr2R 23745413 23745430 chr2R 23745515 23745532 5 102 1.0 2.0 1.5 2.0 119 chr2R 23745413 intron egl - chr2R 23745472 intron egl - chr2R 23745532 intron egl - chr2R_5_23745001 chr2R_23745001 EF39_1-HE 1391 chr2R 23759891 23759944 chr2R 23760011 23760064 5 120 2.0 4.0 3.0 1.2 173 chr2R 23759891 intron CG9850 - chr2R 23759978 intron CG9850 - chr2R 23760064 intron CG9850 - chr2R_5_23755001 chr2R_23755001 EF39_1-HE 1392 chr2R 23771287 23771303 chr2R 23771391 23771407 12 104 3.0 3.0 3.0 3.0 120 chr2R 23771287 intron CG9850 - chr2R 23771347 intron CG9850 - chr2R 23771407 intron CG9850 - chr2R_12_23770001 chr2R_23770001 EF39_1-HE 1393 chr2R 23784456 23784505 chr2R 23784559 23784608 8 103 3.0 4.5 3.8 1.7 152 chr2R 23784456 intron CG9850 - chr2R 23784532 intron CG9850 - chr2R 23784608 intron CG9850 - chr2R_8_23780001 chr2R_23780001 EF39_1-HE 1394 chr2R 23788390 23788441 chr2R 23788610 23788661 11 220 3.5 4.5 4.0 2.2 271 chr2R 23788390 intron CG9850 - chr2R 23788526 intron CG9850 - chr2R 23788661 intron CG9850 - chr2R_11_23785001 chr2R_23785001 EF39_1-HE 1395 chr2R 23877734 23877746 chr2R 23878225 23878242 297 4 495 2.5 1.5 2.0 1.3 508 chr2R 23877734 intergenic ken +,TM4SF + chr2R 23877988 intergenic TM4SF + chr2R 23878242 5` UTR TM4SF + chr2R_4_23875001 chr2R_23875001 EF39_1-HE 1396 chr2R 23914285 23914320 chr2R 23921935 23921970 412 10 7650 2.5 3.0 2.8 2.6 7685 chr2R 23914285 exon kcc + chr2R 23918128 intron kcc + chr2R 23921970 exon kcc + chr2R_10_23915001 chr2R_23915001 EF39_1-HE 1397 chr2R 24031360 24031404 chr2R 24031469 24031514 12 110 5.0 3.5 4.2 2.3 154 chr2R 24031360 5` UTR CG30172 - chr2R 24031437 intergenic CG30172 -,Chi - chr2R 24031514 intergenic Chi -,CG30172 - chr2R_12_24030001 chr2R_24030001 EF39_1-HE 1398 chr2R 24132849 24132884 chr2R 24132980 24133015 4 131 2.5 3.0 2.8 1.1 166 chr2R 24132849 intron tamo - chr2R 24132932 intron tamo - chr2R 24133015 5` UTR tamo - chr2R_4_24130001 chr2R_24130001 EF39_1-HE 1399 chr2R 24144067 24144086 chr2R 24144185 24144204 5 118 3.0 2.5 2.8 1.3 137 chr2R 24144067 intron Dat + chr2R 24144136 intron Dat + chr2R 24144204 intron Dat + chr2R_5_24140001 chr2R_24140001 EF39_1-HE 1400 chr2R 24147041 24147088 chr2R 24154645 24154692 412 11 7602 6.5 2.0 4.2 2.1 7651 chr2R 24147041 intron Dat + chr2R 24150866 intron Dat + chr2R 24154692 intron Dat + chr2R_11_24150001 chr2R_24150001 EF39_1-HE 1401 chr2R 24177215 24177265 chr2R 24184726 24184776 412 10 7511 2.0 0.0 1.0 5.0 7561 chr2R 24177215 3` UTR Nop60B + chr2R 24180996 intron Nop60B + chr2R 24184776 3` UTR Nop60B + chr2R_10_24180001 chr2R_24180001 EF39_1-HE 1402 chr2R 24353411 24353440 chr2R 24361799 24361828 roo 4 8388 3.0 1.5 2.2 1.2 8417 chr2R 24353411 intron,intron bs +,CR44811 - chr2R 24357620 intron,intron bs +,CR44811 - chr2R 24361828 intron,intron bs +,CR44811 - chr2R_4_24355001 chr2R_24355001 EF39_1-HE 1403 chr2R 24446570 24446616 chr2R 24448898 24448944 9 2328 16.0 8.5 12.2 0.7 2374 chr2R 24446570 exon CG3483 + chr2R 24447757 intergenic not near genes chr2R 24448944 intergenic not near genes chr2R_9_24445001 chr2R_24445001 EF39_1-HE 1404 chr2R 24445996 24446055 chr2R 24448890 24448949 11 2895 28.5 9.0 18.8 0.6 2953 chr2R 24445996 exon CG3483 + chr2R 24447472 intergenic not near genes chr2R 24448949 intergenic not near genes chr2R_11_24445001 chr2R_24445001 EF39_1-HE 1405 chr2R 24454158 24454212 chr2R 24454262 24454316 16 103 4.0 3.5 3.8 3.3 158 chr2R 24454158 intergenic not near genes chr2R 24454237 intergenic not near genes chr2R 24454316 intergenic not near genes chr2R_16_24450001 chr2R_24450001 EF39_1-HE 1406 chr2R 24488165 24488171 chr2R 24488293 24488299 4 128 7.0 4.0 5.5 0.6 134 chr2R 24488165 intron CG13579 + chr2R 24488232 intron CG13579 + chr2R 24488299 intron CG13579 + chr2R_4_24485001 chr2R_24485001 EF39_1-HE 1407 chr2R 24488173 24488207 chr2R 24488290 24488335 10 127 4.5 3.5 4.0 2.0 162 chr2R 24488173 intron CG13579 + chr2R 24488254 intron CG13579 + chr2R 24488335 intron CG13579 + chr2R_10_24485001 chr2R_24485001 EF39_1-HE 1408 chr2R 24493062 24493087 chr2R 24493177 24493202 8 113 2.0 1.5 1.8 2.9 140 chr2R 24493062 intergenic CG13590 -,CG13589 - chr2R 24493132 intergenic CG13590 -,CG13589 - chr2R 24493202 intergenic CG13590 -,CG13589 - chr2R_8_24490001 chr2R_24490001 EF39_1-HE 1409 chr2R 24500315 24500374 chr2R 24500433 24500492 16 118 3.5 3.5 3.5 3.6 177 chr2R 24500315 intergenic Ssl -,Prosalpha4T2 - chr2R 24500404 intergenic Ssl -,Prosalpha4T2 - chr2R 24500492 intergenic Ssl -,Prosalpha4T2 - chr2R_16_24500001 chr2R_24500001 EF39_1-HE 1410 chr2R 24527907 24527957 chr2R 24528016 24528066 10 108 4.0 2.5 3.2 2.4 159 chr2R 24527907 exon Brca2 + chr2R 24527986 exon Brca2 + chr2R 24528066 exon Brca2 + chr2R_10_24525001 chr2R_24525001 EF39_1-HE 1411 chr2R 24550125 24550160 chr2R 24550298 24550333 7 173 4.0 0.0 2.0 2.3 208 chr2R 24550125 intron,intron CG4622 -,ITP + chr2R 24550229 intron,intron CG4622 -,ITP + chr2R 24550333 intron,intron CG4622 -,ITP + chr2R_7_24550001 chr2R_24550001 EF39_1-HE 1412 chr2R 24627347 24627399 chr2R 24627451 24627502 9 103 3.0 3.0 3.0 2.2 155 chr2R 24627347 intron CG13594 - chr2R 24627424 intron CG13594 - chr2R 24627502 intron CG13594 - chr2R_9_24625001 chr2R_24625001 EF39_1-HE 1413 chr2R 24647578 24647610 chr2R 24655161 24655193 412 6 7583 3.5 2.5 3.0 1.5 7615 chr2R 24647578 intergenic not near genes chr2R 24651386 intergenic not near genes chr2R 24655193 intergenic not near genes chr2R_6_24650001 chr2R_24650001 EF39_1-HE 1414 chr2R 24694639 24694686 chr2R 24694747 24694794 13 107 4.5 5.0 4.8 2.2 155 chr2R 24694639 intergenic ST6Gal - chr2R 24694716 intergenic ST6Gal - chr2R 24694794 intergenic ST6Gal - chr2R_13_24690001 chr2R_24690001 EF39_1-HE 1415 chr2R 24727860 24727894 chr2R 24735394 24735428 mdg1 8 7533 4.0 2.0 3.0 2.0 7568 chr2R 24727860 intron Mid1 - chr2R 24731644 intron Mid1 - chr2R 24735428 intron Mid1 - chr2R_8_24730001 chr2R_24730001 EF39_1-HE 1416 chr2R 24763589 24763643 chr2R 24765591 24765645 G2 6 2002 1.5 1.0 1.2 2.7 2056 chr2R 24763589 exon CG3894 + chr2R 24764617 intron CG3894 + chr2R 24765645 exon CG3894 + chr2R_6_24760001 chr2R_24760001 EF39_1-HE 1417 chr2R 24840835 24840890 chr2R 24840937 24840992 15 102 4.0 1.0 2.5 4.3 157 chr2R 24840835 intergenic not near genes chr2R 24840914 intergenic not near genes chr2R 24840992 intergenic not near genes chr2R_15_24840001 chr2R_24840001 EF39_1-HE 1418 chr2R 24882495 24882546 chr2R 24882601 24882653 12 106 4.0 3.5 3.8 2.5 158 chr2R 24882495 intron NKAIN + chr2R 24882574 intron NKAIN + chr2R 24882653 5` UTR NKAIN + chr2R_12_24880001 chr2R_24880001 EF39_1-HE 1419 chr2R 24958283 24958316 chr2R 24958593 24958627 6 310 12.0 14.5 13.2 0.4 344 chr2R 24958283 intergenic not near genes chr2R 24958455 intergenic not near genes chr2R 24958627 intergenic not near genes chr2R_6_24955001 chr2R_24955001 EF39_1-HE 1420 chr2R 25022615 25022667 chr2R 25022725 25022777 19 110 2.5 1.0 1.8 6.8 162 chr2R 25022615 intron uzip + chr2R 25022696 intron uzip + chr2R 25022777 intron uzip + chr2R_19_25020001 chr2R_25020001 EF39_1-HE 1421 chr2R 25101248 25101308 chr2R 25101376 25101436 15 128 1.5 1.5 1.5 6.0 188 chr2R 25101248 intron lov - chr2R 25101342 intron lov - chr2R 25101436 intron lov - chr2R_15_25100001 chr2R_25100001 EF39_1-HE 1422 chr2R 25102497 25102555 chr2R 25102692 25102750 12 192 4.5 5.0 4.8 2.1 253 chr2R 25102497 intron lov - chr2R 25102624 intron lov - chr2R 25102750 intron lov - chr2R_12_25100001 chr2R_25100001 EF39_1-HE 1423 chr2R 25104750 25104807 chr2R 25104901 25104958 13 151 2.5 3.0 2.8 3.4 208 chr2R 25104750 intron lov - chr2R 25104854 intron lov - chr2R 25104958 intron lov - chr2R_13_25100001 chr2R_25100001 EF39_1-HE 1424 chr2R 25141639 25141675 chr2R 25159355 25159391 roo 9 17716 4.0 4.5 4.2 1.7 17752 chr2R 25141639 intergenic not near genes chr2R 25150515 intergenic not near genes chr2R 25159391 intergenic not near genes chr2R_9_25150001 chr2R_25150001 EF39_1-HE 1425 chr3L 44770 44820 chr3L 46783 46833 5 2013 1.0 3.5 2.2 1.6 2063 chr3L 44770 intergenic not near genes chr3L 45802 intergenic not near genes chr3L 46833 intergenic not near genes chr3L_5_45001 chr3L_45001 EF39_1-HE 1426 chr3L 58229 58272 chr3L 58827 58870 9 598 24.5 26.0 25.2 0.3 641 chr3L 58229 intergenic not near genes chr3L 58550 intergenic not near genes chr3L 58870 intergenic not near genes chr3L_9_55001 chr3L_55001 EF39_1-HE 1427 chr3L 68959 69007 chr3L 69072 69120 23 113 6.5 3.0 4.8 4.0 161 chr3L 68959 3` UTR Lsp1gamma + chr3L 69040 intergenic Lsp1gamma +,CR44510 + chr3L 69120 intergenic CR44510 +,Lsp1gamma + chr3L_23_65001 chr3L_65001 EF39_1-HE 1428 chr3L 109677 109719 chr3L 110052 110094 4 375 2.0 3.0 2.5 1.1 417 chr3L 109677 intergenic not near genes chr3L 109886 intergenic not near genes chr3L 110094 intergenic not near genes chr3L_4_105001 chr3L_105001 EF39_1-HE 1429 chr3L 110196 110240 chr3L 119389 119433 roo 10 9193 3.0 4.5 3.8 2.1 9237 chr3L 110196 intergenic not near genes chr3L 114814 intergenic not near genes chr3L 119433 intergenic not near genes chr3L_10_110001 chr3L_110001 EF39_1-HE 1430 chr3L 120315 120368 chr3L 120430 120483 13 114 6.0 3.0 4.5 2.4 168 chr3L 120315 intergenic not near genes chr3L 120399 intergenic not near genes chr3L 120483 intergenic not near genes chr3L_13_120001 chr3L_120001 EF39_1-HE 1431 chr3L 170855 170901 chr3L 171201 171247 11 346 4.5 3.0 3.8 2.3 392 chr3L 170855 intron p130CAS + chr3L 171051 intron p130CAS + chr3L 171247 intron p130CAS + chr3L_11_170001 chr3L_170001 EF39_1-HE 1432 chr3L 338920 338968 chr3L 339024 339072 11 104 5.5 2.5 4.0 2.2 152 chr3L 338920 intron,intron Ptpmeg +,mthl10 - chr3L 338996 intron,intron Ptpmeg +,mthl10 - chr3L 339072 intron,intron Ptpmeg +,mthl10 - chr3L_11_335001 chr3L_335001 EF39_1-HE 1433 chr3L 342952 343004 chr3L 343113 343165 13 161 2.0 1.5 1.8 4.6 213 chr3L 342952 intron Ptpmeg + chr3L 343058 intron Ptpmeg + chr3L 343165 intron Ptpmeg + chr3L_13_340001 chr3L_340001 EF39_1-HE 1434 chr3L 402663 402713 chr3L 409742 409772 297 16 7078 3.0 6.5 4.8 2.8 7109 chr3L 402663 intergenic not near genes chr3L 406218 intergenic not near genes chr3L 409772 intergenic not near genes chr3L_16_405001 chr3L_405001 EF39_1-HE 1435 chr3L 423200 423213 chr3L 423306 423319 6 106 2.5 4.0 3.2 1.4 119 chr3L 423200 intergenic not near genes chr3L 423260 intergenic not near genes chr3L 423319 intergenic not near genes chr3L_6_420001 chr3L_420001 EF39_1-HE 1436 chr3L 445524 445581 chr3L 445626 445692 7 109 7.0 2.5 4.8 1.2 168 chr3L 445524 exon klar - chr3L 445608 intron klar - chr3L 445692 intron klar - chr3L_7_445001 chr3L_445001 EF39_1-HE 1437 chr3L 459874 460005 chr3L 459995 460108 20 104 6.5 11.5 9.0 2.0 234 chr3L 459874 intron klar - chr3L 459991 intron klar - chr3L 460108 intron klar - chr3L_20_455001 chr3L_455001 EF39_1-HE 1438 chr3L 460851 460907 chr3L 461150 461205 29 299 3.5 8.5 6.0 4.1 354 chr3L 460851 intron klar - chr3L 461028 intron klar - chr3L 461205 intron klar - chr3L_29_460001 chr3L_460001 EF39_1-HE 1439 chr3L 514251 514306 chr3L 514354 514409 17 103 2.5 5.0 3.8 3.5 158 chr3L 514251 intron klar - chr3L 514330 intron klar - chr3L 514409 intron klar - chr3L_17_510001 chr3L_510001 EF39_1-HE 1440 chr3L 516136 516190 chr3L 516249 516303 17 113 2.0 2.5 2.2 5.3 167 chr3L 516136 intron klar - chr3L 516220 intron klar - chr3L 516303 intron klar - chr3L_17_515001 chr3L_515001 EF39_1-HE 1441 chr3L 524752 524775 chr3L 524860 524883 5 108 0.0 2.0 1.0 2.5 131 chr3L 524752 intron klar - chr3L 524818 intron klar - chr3L 524883 intron klar - chr3L_5_520001 chr3L_520001 EF39_1-HE 1442 chr3L 535025 535047 chr3L 535133 535155 5 108 8.0 4.0 6.0 0.7 130 chr3L 535025 intron klar - chr3L 535090 intron klar - chr3L 535155 intron klar - chr3L_5_535001 chr3L_535001 EF39_1-HE 1443 chr3L 535048 535077 chr3L 535126 535185 7 104 4.0 3.5 3.8 1.5 137 chr3L 535048 intron klar - chr3L 535116 intron klar - chr3L 535185 intron klar - chr3L_7_535001 chr3L_535001 EF39_1-HE 1444 chr3L 535782 535793 chr3L 536015 536026 5 233 8.0 2.5 5.2 0.8 244 chr3L 535782 intron klar - chr3L 535904 intron klar - chr3L 536026 intron klar - chr3L_5_535001 chr3L_535001 EF39_1-HE 1445 chr3L 535796 535840 chr3L 536022 536073 5 232 1.0 2.5 1.8 1.8 277 chr3L 535796 intron klar - chr3L 535934 intron klar - chr3L 536073 intron klar - chr3L_5_535001 chr3L_535001 EF39_1-HE 1446 chr3L 545107 545151 chr3L 545209 545239 13 104 5.0 5.0 5.0 2.2 132 chr3L 545107 intergenic not near genes chr3L 545173 intergenic not near genes chr3L 545239 intergenic not near genes chr3L_13_545001 chr3L_545001 EF39_1-HE 1447 chr3L 659431 659439 chr3L 659534 659542 4 103 0.0 6.0 3.0 1.0 111 chr3L 659431 intergenic not near genes chr3L 659486 intergenic not near genes chr3L 659542 intergenic not near genes chr3L_4_655001 chr3L_655001 EF39_1-HE 1448 chr3L 662909 662945 chr3L 663016 663052 9 106 3.5 9.5 6.5 1.2 143 chr3L 662909 intergenic not near genes chr3L 662980 intergenic not near genes chr3L 663052 intergenic not near genes chr3L_9_660001 chr3L_660001 EF39_1-HE 1449 chr3L 665848 665880 chr3L 665957 665989 8 109 0.5 5.5 3.0 2.0 141 chr3L 665848 intergenic not near genes chr3L 665918 intergenic not near genes chr3L 665989 intergenic not near genes chr3L_8_665001 chr3L_665001 EF39_1-HE 1450 chr3L 697569 697607 chr3L 697679 697717 8 110 6.5 1.5 4.0 1.6 148 chr3L 697569 intron CG13894 - chr3L 697643 intron CG13894 - chr3L 697717 intron CG13894 - chr3L_8_695001 chr3L_695001 EF39_1-HE 1451 chr3L 701040 701059 chr3L 701318 701337 9 278 7.0 4.5 5.8 1.3 297 chr3L 701040 intergenic not near genes chr3L 701188 intergenic not near genes chr3L 701337 intergenic not near genes chr3L_9_700001 chr3L_700001 EF39_1-HE 1452 chr3L 701064 701072 chr3L 701342 701350 4 278 6.0 8.0 7.0 0.5 286 chr3L 701064 intergenic not near genes chr3L 701207 intergenic not near genes chr3L 701350 intergenic not near genes chr3L_4_700001 chr3L_700001 EF39_1-HE 1453 chr3L 705872 705906 chr3L 705994 706028 7 122 7.5 4.5 6.0 1.0 156 chr3L 705872 intergenic CG13895 -,CR44514 + chr3L 705950 3` UTR CG13895 - chr3L 706028 3` UTR CG13895 - chr3L_7_705001 chr3L_705001 EF39_1-HE 1454 chr3L 719685 719721 chr3L 719814 719851 7 130 3.0 1.5 2.2 2.2 166 chr3L 719685 intergenic not near genes chr3L 719768 intergenic not near genes chr3L 719851 intergenic not near genes chr3L_7_715001 chr3L_715001 EF39_1-HE 1455 chr3L 746468 746526 chr3L 746579 746637 18 111 5.0 4.5 4.8 3.1 169 chr3L 746468 intron hng3 - chr3L 746552 intron hng3 - chr3L 746637 intron hng3 - chr3L_18_745001 chr3L_745001 EF39_1-HE 1456 chr3L 789886 789947 chr3L 790397 790458 roo 21 511 4.5 5.0 4.8 3.6 572 chr3L 789886 intergenic not near genes chr3L 790172 intergenic not near genes chr3L 790458 intergenic not near genes chr3L_21_790001 chr3L_790001 EF39_1-HE 1457 chr3L 857974 858001 chr3L 866481 866508 Tirant 7 8505 8.0 6.0 7.0 0.9 8534 chr3L 857974 intergenic not near genes chr3L 862241 intergenic not near genes chr3L 866508 5` UTR CG12502 + chr3L_7_860001 chr3L_860001 EF39_1-HE 1458 chr3L 917892 917949 chr3L 917999 918057 16 107 2.0 5.0 3.5 3.6 165 chr3L 917892 intron Glut1 + chr3L 917974 intron Glut1 + chr3L 918057 intron Glut1 + chr3L_16_915001 chr3L_915001 EF39_1-HE 1459 chr3L 925163 925193 chr3L 932615 932645 mdg1 7 7452 2.0 1.5 1.8 2.5 7482 chr3L 925163 intron Glut1 + chr3L 928904 intron Glut1 + chr3L 932645 intron Glut1 + chr3L_7_925001 chr3L_925001 EF39_1-HE 1460 chr3L 939274 939296 chr3L 939380 939415 4 114 11.0 9.0 10.0 0.4 141 chr3L 939274 intron Glut1 + chr3L 939344 intron Glut1 + chr3L 939415 intron Glut1 + chr3L_4_935001 chr3L_935001 EF39_1-HE 1461 chr3L 939750 939791 chr3L 940897 940938 jockey 11 1147 4.0 9.0 6.5 1.5 1188 chr3L 939750 intron Glut1 + chr3L 940344 intron Glut1 + chr3L 940938 intron Glut1 + chr3L_11_940001 chr3L_940001 EF39_1-HE 1462 chr3L 968171 968193 chr3L 968276 968298 7 105 4.0 0.0 2.0 2.3 127 chr3L 968171 intron Glut1 + chr3L 968234 intron Glut1 + chr3L 968298 intron Glut1 + chr3L_7_965001 chr3L_965001 EF39_1-HE 1463 chr3L 1012033 1012076 chr3L 1012246 1012289 7 213 1.5 5.5 3.5 1.6 256 chr3L 1012033 intron trio - chr3L 1012161 intron trio - chr3L 1012289 intron trio - chr3L_7_1010001 chr3L_1010001 EF39_1-HE 1464 chr3L 1017122 1017135 chr3L 1018594 1018607 4 1472 0.0 8.0 4.0 0.8 1485 chr3L 1017122 intron trio - chr3L 1017864 intron trio - chr3L 1018607 intron trio - chr3L_4_1015001 chr3L_1015001 EF39_1-HE 1465 chr3L 1034996 1035040 chr3L 1035149 1035172 5 136 17.0 15.0 16.0 0.3 176 chr3L 1034996 intron CG9205 + chr3L 1035084 intron CG9205 + chr3L 1035172 intron CG9205 + chr3L_5_1035001 chr3L_1035001 EF39_1-HE 1466 chr3L 1046036 1046072 chr3L 1046159 1046195 4 123 3.0 1.5 2.2 1.2 159 chr3L 1046036 intron bab1 - chr3L 1046116 intron bab1 - chr3L 1046195 intron bab1 - chr3L_4_1045001 chr3L_1045001 EF39_1-HE 1467 chr3L 1063423 1063472 chr3L 1063534 1063583 9 109 2.0 4.5 3.2 2.1 160 chr3L 1063423 intron bab1 - chr3L 1063503 intron bab1 - chr3L 1063583 intron bab1 - chr3L_9_1060001 chr3L_1060001 EF39_1-HE 1468 chr3L 1084456 1084483 chr3L 1084558 1084585 8 102 11.0 4.5 7.8 0.9 129 chr3L 1084456 intron bab1 - chr3L 1084520 intron bab1 - chr3L 1084585 intron bab1 - chr3L_8_1080001 chr3L_1080001 EF39_1-HE 1469 chr3L 1103991 1104012 chr3L 1104095 1104116 10 104 6.0 0.0 3.0 2.5 125 chr3L 1103991 intergenic not near genes chr3L 1104054 intergenic not near genes chr3L 1104116 intergenic not near genes chr3L_10_1100001 chr3L_1100001 EF39_1-HE 1470 chr3L 1109623 1109666 chr3L 1109737 1109780 17 114 4.0 4.5 4.2 3.3 157 chr3L 1109623 intergenic not near genes chr3L 1109702 intergenic not near genes chr3L 1109780 intergenic not near genes chr3L_17_1105001 chr3L_1105001 EF39_1-HE 1471 chr3L 1154103 1154157 chr3L 1163279 1163333 roo 10 9176 2.0 3.0 2.5 2.9 9230 chr3L 1154103 intron bab2 - chr3L 1158718 intron bab2 - chr3L 1163333 intron bab2 - chr3L_10_1155001 chr3L_1155001 EF39_1-HE 1472 chr3L 1166993 1167006 chr3L 1167103 1167116 4 110 3.5 2.5 3.0 1.0 123 chr3L 1166993 intron bab2 - chr3L 1167054 intron bab2 - chr3L 1167116 intron bab2 - chr3L_4_1165001 chr3L_1165001 EF39_1-HE 1473 chr3L 1169027 1169075 chr3L 1169134 1169181 7 106 1.5 2.0 1.8 2.5 154 chr3L 1169027 intron bab2 - chr3L 1169104 intron bab2 - chr3L 1169181 intron bab2 - chr3L_7_1165001 chr3L_1165001 EF39_1-HE 1474 chr3L 1219570 1219622 chr3L 1227329 1227381 412 8 7759 3.5 2.0 2.8 2.1 7811 chr3L 1219570 intron mwh + chr3L 1223476 intron mwh + chr3L 1227381 intron mwh + chr3L_8_1220001 chr3L_1220001 EF39_1-HE 1475 chr3L 1350903 1350922 chr3L 1351021 1351040 4 118 9.0 5.0 7.0 0.5 137 chr3L 1350903 intron Ptp61F - chr3L 1350972 intron Ptp61F - chr3L 1351040 intron Ptp61F - chr3L_4_1350001 chr3L_1350001 EF39_1-HE 1476 chr3L 1354346 1354398 chr3L 1354450 1354502 17 103 9.5 6.0 7.8 1.9 156 chr3L 1354346 intron Ptp61F - chr3L 1354424 intron Ptp61F - chr3L 1354502 intron Ptp61F - chr3L_17_1350001 chr3L_1350001 EF39_1-HE 1477 chr3L 1356996 1357011 chr3L 1357099 1357114 8 103 11.5 15.5 13.5 0.6 118 chr3L 1356996 intron Ptp61F - chr3L 1357055 intron Ptp61F - chr3L 1357114 intron Ptp61F - chr3L_8_1355001 chr3L_1355001 EF39_1-HE 1478 chr3L 1361271 1361323 chr3L 1361373 1361425 16 102 4.5 7.0 5.8 2.4 154 chr3L 1361271 intron Ptp61F - chr3L 1361348 intron Ptp61F - chr3L 1361425 intron Ptp61F - chr3L_16_1360001 chr3L_1360001 EF39_1-HE 1479 chr3L 1374304 1374363 chr3L 1374410 1374444 6 102 1.0 5.5 3.2 1.4 140 chr3L 1374304 intron,intron Ptp61F -,ru + chr3L 1374374 intron,intron Ptp61F -,ru + chr3L 1374444 intron,intron Ptp61F -,ru + chr3L_6_1370001 chr3L_1370001 EF39_1-HE 1480 chr3L 1396712 1396759 chr3L 1396822 1396865 7 107 3.0 3.5 3.2 1.7 153 chr3L 1396712 intron Ptp61F - chr3L 1396788 intron Ptp61F - chr3L 1396865 intron Ptp61F - chr3L_7_1395001 chr3L_1395001 EF39_1-HE 1481 chr3L 1415747 1415807 chr3L 1415855 1415915 17 107 4.0 4.5 4.2 3.3 168 chr3L 1415747 intron Ptp61F - chr3L 1415831 intron Ptp61F - chr3L 1415915 intron Ptp61F - chr3L_17_1415001 chr3L_1415001 EF39_1-HE 1482 chr3L 1424752 1424771 chr3L 1430022 1430039 Rt1a 6 5268 0.5 8.0 4.2 1.2 5287 chr3L 1424752 intron Ptp61F - chr3L 1427396 intron Ptp61F - chr3L 1430039 intron Ptp61F - chr3L_6_1425001 chr3L_1425001 EF39_1-HE 1483 chr3L 1438713 1438758 chr3L 1438817 1438862 13 103 0.5 5.0 2.8 3.4 149 chr3L 1438713 intron Ptp61F - chr3L 1438788 intron Ptp61F - chr3L 1438862 intron Ptp61F - chr3L_13_1435001 chr3L_1435001 EF39_1-HE 1484 chr3L 1505970 1506028 chr3L 1513593 1513651 17.6 15 7623 4.0 5.0 4.5 2.7 7681 chr3L 1505970 intron,intron Psa +,cue - chr3L 1509810 intron,intron Psa +,cue - chr3L 1513651 intron,intron Psa +,cue - chr3L_15_1505001 chr3L_1505001 EF39_1-HE 1485 chr3L 1584119 1584122 chr3L 1584222 1584230 5 107 0.0 4.5 2.2 1.6 111 chr3L 1584119 intron CG13917 + chr3L 1584174 intron CG13917 + chr3L 1584230 intron CG13917 + chr3L_5_1580001 chr3L_1580001 EF39_1-HE 1486 chr3L 1663682 1663688 chr3L 1663786 1663791 4 104 6.5 2.0 4.2 0.8 109 chr3L 1663682 intron CG7971 - chr3L 1663736 intron CG7971 - chr3L 1663791 intron CG7971 - chr3L_4_1660001 chr3L_1660001 EF39_1-HE 1487 chr3L 1663689 1663735 chr3L 1663785 1663839 15 103 0.5 2.0 1.2 6.8 150 chr3L 1663689 intron CG7971 - chr3L 1663764 intron CG7971 - chr3L 1663839 intron CG7971 - chr3L_15_1660001 chr3L_1660001 EF39_1-HE 1488 chr3L 1704998 1705056 chr3L 1705106 1705163 7 107 2.0 0.0 1.0 3.5 165 chr3L 1704998 intron CG7991 + chr3L 1705080 intron CG7991 + chr3L 1705163 intron CG7991 + chr3L_7_1705001 chr3L_1705001 EF39_1-HE 1489 chr3L 1805671 1805705 chr3L 1805871 1805905 10 200 3.5 1.0 2.2 3.1 234 chr3L 1805671 exon CG42676 + chr3L 1805788 intron CG42676 + chr3L 1805905 intron CG42676 + chr3L_10_1805001 chr3L_1805001 EF39_1-HE 1490 chr3L 1805708 1805712 chr3L 1805908 1805912 4 200 3.0 6.5 4.8 0.7 204 chr3L 1805708 exon CG42676 + chr3L 1805810 intron CG42676 + chr3L 1805912 intron CG42676 + chr3L_4_1805001 chr3L_1805001 EF39_1-HE 1491 chr3L 1809504 1809555 chr3L 1809636 1809687 8 132 3.0 0.5 1.8 2.9 183 chr3L 1809504 intergenic not near genes chr3L 1809596 intergenic not near genes chr3L 1809687 intergenic not near genes chr3L_8_1805001 chr3L_1805001 EF39_1-HE 1492 chr3L 1821615 1821631 chr3L 1821723 1821739 4 108 2.0 3.0 2.5 1.1 124 chr3L 1821615 intron GV1 + chr3L 1821677 intron GV1 + chr3L 1821739 intron GV1 + chr3L_4_1820001 chr3L_1820001 EF39_1-HE 1493 chr3L 1853025 1853048 chr3L 1853133 1853158 8 110 5.0 2.0 3.5 1.8 133 chr3L 1853025 intron CG13936 - chr3L 1853092 intron CG13936 - chr3L 1853158 intron CG13936 - chr3L_8_1850001 chr3L_1850001 EF39_1-HE 1494 chr3L 1885129 1885183 chr3L 1885235 1885289 12 106 2.0 3.0 2.5 3.4 160 chr3L 1885129 intergenic Aprt - chr3L 1885209 intergenic Aprt -,Tmhs + chr3L 1885289 intergenic Aprt -,Tmhs + chr3L_12_1885001 chr3L_1885001 EF39_1-HE 1495 chr3L 1913549 1913557 chr3L 1913652 1913660 6 103 6.5 3.5 5.0 1.0 111 chr3L 1913549 intergenic not near genes chr3L 1913604 intergenic not near genes chr3L 1913660 intergenic not near genes chr3L_6_1910001 chr3L_1910001 EF39_1-HE 1496 chr3L 1922431 1922469 chr3L 1922534 1922572 14 103 10.5 9.0 9.8 1.3 141 chr3L 1922431 intron Dbx + chr3L 1922502 intron Dbx + chr3L 1922572 intron Dbx + chr3L_14_1920001 chr3L_1920001 EF39_1-HE 1497 chr3L 1988079 1988126 chr3L 1988245 1988292 12 166 6.0 4.5 5.2 1.9 213 chr3L 1988079 intergenic not near genes chr3L 1988186 intergenic not near genes chr3L 1988292 intergenic not near genes chr3L_12_1985001 chr3L_1985001 EF39_1-HE 1498 chr3L 1991093 1991136 chr3L 1991198 1991240 7 104 3.5 2.5 3.0 1.8 147 chr3L 1991093 intergenic not near genes chr3L 1991166 intergenic not near genes chr3L 1991240 intergenic not near genes chr3L_7_1990001 chr3L_1990001 EF39_1-HE 1499 chr3L 2013633 2013684 chr3L 2013737 2013788 12 103 3.0 3.5 3.2 2.9 155 chr3L 2013633 intergenic not near genes chr3L 2013710 intergenic not near genes chr3L 2013788 intergenic not near genes chr3L_12_2010001 chr3L_2010001 EF39_1-HE 1500 chr3L 2108226 2108233 chr3L 2113456 2113463 copia 5 5230 1.0 2.0 1.5 2.0 5237 chr3L 2108226 intron sls - chr3L 2110844 intron sls - chr3L 2113463 intron sls - chr3L_5_2110001 chr3L_2110001 EF39_1-HE 1501 chr3L 2139183 2139234 chr3L 2139290 2139341 13 107 2.0 2.5 2.2 4.1 158 chr3L 2139183 intron zormin - chr3L 2139262 intron zormin - chr3L 2139341 intron zormin - chr3L_13_2135001 chr3L_2135001 EF39_1-HE 1502 chr3L 2157985 2158035 chr3L 2158119 2158165 10 131 2.0 5.0 3.5 2.2 180 chr3L 2157985 intron CG15822 - chr3L 2158075 intron CG15822 - chr3L 2158165 intron CG15822 - chr3L_10_2155001 chr3L_2155001 EF39_1-HE 1503 chr3L 2199784 2199812 chr3L 2199886 2199914 14 102 8.0 4.5 6.2 1.9 130 chr3L 2199784 intergenic not near genes chr3L 2199849 intergenic not near genes chr3L 2199914 intergenic not near genes chr3L_14_2195001 chr3L_2195001 EF39_1-HE 1504 chr3L 2217726 2217734 chr3L 2217828 2217836 5 102 6.5 4.5 5.5 0.8 110 chr3L 2217726 intergenic not near genes chr3L 2217781 intergenic not near genes chr3L 2217836 intergenic not near genes chr3L_5_2215001 chr3L_2215001 EF39_1-HE 1505 chr3L 2282898 2283023 chr3L 2283013 2283125 10 119 0.0 0.0 0.0 10.0 227 chr3L 2282898 5` UTR MsR2 + chr3L 2283012 5` UTR MsR2 + chr3L 2283125 5` UTR MsR2 + chr3L_10_2280001 chr3L_2280001 EF39_1-HE 1506 chr3L 2314409 2314463 chr3L 2314513 2314567 13 104 4.0 5.5 4.8 2.2 158 chr3L 2314409 intergenic not near genes chr3L 2314488 intergenic not near genes chr3L 2314567 intergenic not near genes chr3L_13_2310001 chr3L_2310001 EF39_1-HE 1507 chr3L 2322730 2322744 chr3L 2322863 2322877 6 133 8.5 5.0 6.8 0.8 147 chr3L 2322730 5` UTR MsR1 + chr3L 2322804 intron MsR1 + chr3L 2322877 intron MsR1 + chr3L_6_2320001 chr3L_2320001 EF39_1-HE 1508 chr3L 2340215 2340263 chr3L 2340663 2340711 9 447 1.0 0.0 0.5 6.0 496 chr3L 2340215 intron MsR1 + chr3L 2340463 intron MsR1 + chr3L 2340711 intron MsR1 + chr3L_9_2340001 chr3L_2340001 EF39_1-HE 1509 chr3L 2366527 2366582 chr3L 2366635 2366691 13 109 2.5 2.5 2.5 3.7 164 chr3L 2366527 intergenic not near genes chr3L 2366609 intergenic not near genes chr3L 2366691 intergenic not near genes chr3L_13_2365001 chr3L_2365001 EF39_1-HE 1510 chr3L 2382682 2382733 chr3L 2382790 2382841 16 108 3.0 5.0 4.0 3.2 159 chr3L 2382682 intergenic not near genes chr3L 2382762 intergenic not near genes chr3L 2382841 intergenic not near genes chr3L_16_2380001 chr3L_2380001 EF39_1-HE 1511 chr3L 2384943 2384998 chr3L 2385051 2385106 31 108 6.5 5.0 5.8 4.6 163 chr3L 2384943 intergenic not near genes chr3L 2385024 intergenic not near genes chr3L 2385106 intergenic not near genes chr3L_31_2385001 chr3L_2385001 EF39_1-HE 1512 chr3L 2447482 2447524 chr3L 2456664 2456706 roo 9 9182 2.5 1.5 2.0 3.0 9224 chr3L 2447482 intron CG45186 + chr3L 2452094 intron CG45186 + chr3L 2456706 intron CG45186 + chr3L_9_2450001 chr3L_2450001 EF39_1-HE 1513 chr3L 2515375 2515383 chr3L 2515482 2515491 8 108 5.5 4.5 5.0 1.3 116 chr3L 2515375 intron Spn - chr3L 2515433 intron Spn - chr3L 2515491 intron Spn - chr3L_8_2515001 chr3L_2515001 EF39_1-HE 1514 chr3L 2533631 2533669 chr3L 2533739 2533777 6 108 6.5 14.5 10.5 0.5 146 chr3L 2533631 intron Spn - chr3L 2533704 intron Spn - chr3L 2533777 intron Spn - chr3L_6_2530001 chr3L_2530001 EF39_1-HE 1515 chr3L 2554158 2554200 chr3L 2554254 2554306 4 104 1.5 4.5 3.0 1.0 148 chr3L 2554158 5` UTR Spn - chr3L 2554232 5` UTR Spn - chr3L 2554306 intergenic Spn - chr3L_4_2550001 chr3L_2550001 EF39_1-HE 1516 chr3L 2561504 2561561 chr3L 2561607 2561664 15 103 3.5 2.5 3.0 3.8 160 chr3L 2561504 intron msn - chr3L 2561584 intron msn - chr3L 2561664 intron msn - chr3L_15_2560001 chr3L_2560001 EF39_1-HE 1517 chr3L 2565063 2565090 chr3L 2565166 2565193 14 103 6.5 18.5 12.5 1.0 130 chr3L 2565063 intron msn - chr3L 2565128 intron msn - chr3L 2565193 intron msn - chr3L_14_2565001 chr3L_2565001 EF39_1-HE 1518 chr3L 2616476 2616501 chr3L 2616630 2616654 5 154 2.0 8.0 5.0 0.8 178 chr3L 2616476 intron Pxn - chr3L 2616565 intron Pxn - chr3L 2616654 intron Pxn - chr3L_5_2615001 chr3L_2615001 EF39_1-HE 1519 chr3L 2683919 2683954 chr3L 2684020 2684056 11 102 6.0 2.5 4.2 2.1 137 chr3L 2683919 intron Fife - chr3L 2683988 intron Fife - chr3L 2684056 intron Fife - chr3L_11_2680001 chr3L_2680001 EF39_1-HE 1520 chr3L 2692146 2692188 chr3L 2692250 2692292 18 104 6.0 9.0 7.5 2.1 146 chr3L 2692146 intron Fife - chr3L 2692219 intron Fife - chr3L 2692292 intron Fife - chr3L_18_2690001 chr3L_2690001 EF39_1-HE 1521 chr3L 2697213 2697253 chr3L 2697404 2697443 9 190 6.5 2.5 4.5 1.6 230 chr3L 2697213 intron Fife - chr3L 2697328 intron Fife - chr3L 2697443 intron Fife - chr3L_9_2695001 chr3L_2695001 EF39_1-HE 1522 chr3L 2710498 2710513 chr3L 2710648 2710663 4 150 2.0 2.5 2.2 1.2 165 chr3L 2710498 intron Fife - chr3L 2710580 intron Fife - chr3L 2710663 intron Fife - chr3L_4_2710001 chr3L_2710001 EF39_1-HE 1523 chr3L 2725888 2725934 chr3L 2726003 2726049 22 114 5.5 5.5 5.5 3.4 161 chr3L 2725888 intron Mrtf - chr3L 2725968 intron Mrtf - chr3L 2726049 intron Mrtf - chr3L_22_2725001 chr3L_2725001 EF39_1-HE 1524 chr3L 2747867 2747898 chr3L 2747989 2748028 6 126 2.5 0.0 1.2 2.7 161 chr3L 2747867 intron Mrtf - chr3L 2747948 intron Mrtf - chr3L 2748028 intron Mrtf - chr3L_6_2745001 chr3L_2745001 EF39_1-HE 1525 chr3L 2795722 2795748 chr3L 2795871 2795897 4 149 1.5 5.0 3.2 1.0 175 chr3L 2795722 intron CG43444 - chr3L 2795810 intron CG43444 - chr3L 2795897 intron CG43444 - chr3L_4_2795001 chr3L_2795001 EF39_1-HE 1526 chr3L 2841703 2841755 chr3L 2841805 2841857 8 102 1.5 2.5 2.0 2.7 154 chr3L 2841703 intron CG43444 - chr3L 2841780 intron CG43444 - chr3L 2841857 intron CG43444 - chr3L_8_2840001 chr3L_2840001 EF39_1-HE 1527 chr3L 2857343 2857396 chr3L 2857448 2857495 16 102 6.0 5.5 5.8 2.4 152 chr3L 2857343 intron CG43444 - chr3L 2857419 intron CG43444 - chr3L 2857495 intron CG43444 - chr3L_16_2855001 chr3L_2855001 EF39_1-HE 1528 chr3L 2873559 2873574 chr3L 2873665 2873680 7 106 13.5 0.0 6.8 0.9 121 chr3L 2873559 intron CG43444 - chr3L 2873620 intron CG43444 - chr3L 2873680 intron CG43444 - chr3L_7_2870001 chr3L_2870001 EF39_1-HE 1529 chr3L 2882089 2882122 chr3L 2882191 2882223 12 102 10.5 3.5 7.0 1.5 134 chr3L 2882089 intergenic not near genes chr3L 2882156 intergenic not near genes chr3L 2882223 intergenic not near genes chr3L_12_2880001 chr3L_2880001 EF39_1-HE 1530 chr3L 2897407 2897428 chr3L 2897543 2897564 10 136 0.0 1.5 0.8 5.6 157 chr3L 2897407 5` UTR Shab + chr3L 2897486 intron Shab + chr3L 2897564 intron Shab + chr3L_10_2895001 chr3L_2895001 EF39_1-HE 1531 chr3L 2927813 2927868 chr3L 2936116 2936170 Tirant 18 8302 10.5 3.0 6.8 2.3 8357 chr3L 2927813 intron Shab + chr3L 2931992 intron Shab + chr3L 2936170 intron Shab + chr3L_18_2930001 chr3L_2930001 EF39_1-HE 1532 chr3L 2991471 2991502 chr3L 2991573 2991604 7 102 0.0 4.5 2.2 2.2 133 chr3L 2991471 intergenic not near genes chr3L 2991538 intergenic not near genes chr3L 2991604 intergenic not near genes chr3L_7_2990001 chr3L_2990001 EF39_1-HE 1533 chr3L 3051719 3051757 chr3L 3051987 3052027 pogo 7 268 1.5 2.0 1.8 2.5 308 chr3L 3051719 3` UTR CG32485 + chr3L 3051873 intergenic CG32485 + chr3L 3052027 intergenic CG32485 +,CG1271 + chr3L_7_3050001 chr3L_3050001 EF39_1-HE 1534 chr3L 3061261 3061315 chr3L 3069870 3069924 Tirant 28 8608 5.0 5.0 5.0 4.7 8663 chr3L 3061261 intron CG32486 - chr3L 3065592 intron CG32486 - chr3L 3069924 intron CG32486 - chr3L_28_3065001 chr3L_3065001 EF39_1-HE 1535 chr3L 3097112 3097117 chr3L 3097255 3097259 4 142 2.5 1.0 1.8 1.4 147 chr3L 3097112 intron Cht7 - chr3L 3097186 intron Cht7 - chr3L 3097259 intron Cht7 - chr3L_4_3095001 chr3L_3095001 EF39_1-HE 1536 chr3L 3103424 3103465 chr3L 3103526 3103567 6 102 3.0 0.5 1.8 2.1 143 chr3L 3103424 intron Cht7 - chr3L 3103496 intron Cht7 - chr3L 3103567 intron Cht7 - chr3L_6_3100001 chr3L_3100001 EF39_1-HE 1537 chr3L 3124760 3124769 chr3L 3124955 3124964 5 194 1.0 4.0 2.5 1.4 204 chr3L 3124760 intron prominin-like - chr3L 3124862 intron prominin-like - chr3L 3124964 intron prominin-like - chr3L_5_3120001 chr3L_3120001 EF39_1-HE 1538 chr3L 3134641 3134695 chr3L 3134769 3134823 9 128 2.5 3.5 3.0 2.2 182 chr3L 3134641 intron CG11537 - chr3L 3134732 intron CG11537 - chr3L 3134823 intron CG11537 - chr3L_9_3130001 chr3L_3130001 EF39_1-HE 1539 chr3L 3177634 3177663 chr3L 3177741 3177770 6 105 10.0 3.5 6.8 0.8 136 chr3L 3177634 exon CG14964 - chr3L 3177702 intron CG14964 - chr3L 3177770 intron CG14964 - chr3L_6_3175001 chr3L_3175001 EF39_1-HE 1540 chr3L 3247602 3247613 chr3L 3247710 3247721 7 108 3.0 5.0 4.0 1.4 119 chr3L 3247602 intergenic CG43389 + chr3L 3247662 intergenic CG43389 + chr3L 3247721 intergenic CG43389 + chr3L_7_3245001 chr3L_3245001 EF39_1-HE 1541 chr3L 3252314 3252371 chr3L 3252416 3252472 8 100 3.5 3.0 3.2 1.9 158 chr3L 3252314 5` UTR CR43626 + chr3L 3252393 5` UTR CR43626 + chr3L 3252472 5` UTR CR43626 + chr3L_8_3250001 chr3L_3250001 EF39_1-HE 1542 chr3L 3259789 3259829 chr3L 3259915 3259955 16 126 2.0 2.0 2.0 5.3 166 chr3L 3259789 intron ckd + chr3L 3259872 intron ckd + chr3L 3259955 intron ckd + chr3L_16_3255001 chr3L_3255001 EF39_1-HE 1543 chr3L 3263798 3263818 chr3L 3263903 3263923 5 105 0.0 3.5 1.8 1.8 125 chr3L 3263798 intron ckd + chr3L 3263860 intron ckd + chr3L 3263923 intron ckd + chr3L_5_3260001 chr3L_3260001 EF39_1-HE 1544 chr3L 3272292 3272345 chr3L 3272399 3272452 16 106 1.0 1.0 1.0 8.0 160 chr3L 3272292 intron CG14960 + chr3L 3272372 intron CG14960 + chr3L 3272452 intron CG14960 + chr3L_16_3270001 chr3L_3270001 EF39_1-HE 1545 chr3L 3273320 3273355 chr3L 3273428 3273461 4 108 2.5 2.5 2.5 1.1 141 chr3L 3273320 intron CG14960 + chr3L 3273390 intron CG14960 + chr3L 3273461 intron CG14960 + chr3L_4_3270001 chr3L_3270001 EF39_1-HE 1546 chr3L 3281427 3281468 chr3L 3281941 3281990 Doc 16 521 5.5 7.0 6.2 2.2 563 chr3L 3281427 intron CG12017 + chr3L 3281708 intron CG12017 + chr3L 3281990 intron CG12017 + chr3L_16_3280001 chr3L_3280001 EF39_1-HE 1547 chr3L 3294118 3294148 chr3L 3294235 3294263 8 117 4.5 5.0 4.8 1.4 145 chr3L 3294118 intron CG12009 + chr3L 3294190 intron CG12009 + chr3L 3294263 intron CG12009 + chr3L_8_3290001 chr3L_3290001 EF39_1-HE 1548 chr3L 3314113 3314167 chr3L 3314273 3314327 15 160 3.0 7.0 5.0 2.5 214 chr3L 3314113 intergenic ZnT63C +,Drsl2 + chr3L 3314220 intergenic Drsl2 +,ZnT63C + chr3L 3314327 intergenic Drsl2 +,ZnT63C + chr3L_15_3310001 chr3L_3310001 EF39_1-HE 1549 chr3L 3326045 3326082 chr3L 3326173 3326209 5 127 2.5 1.5 2.0 1.7 164 chr3L 3326045 intron CG11526 - chr3L 3326127 intron CG11526 - chr3L 3326209 intron CG11526 - chr3L_5_3325001 chr3L_3325001 EF39_1-HE 1550 chr3L 3365547 3365577 chr3L 3374098 3374127 9 8550 30.5 23.5 27.0 0.3 8580 chr3L 3365547 exon kst + chr3L 3369837 3` UTR Drs + chr3L 3374127 5` UTR YT521-B - chr3L_9_3365001 chr3L_3365001 EF39_1-HE 1551 chr3L 3436261 3436314 chr3L 3436374 3436419 5 111 0.0 4.5 2.2 1.6 158 chr3L 3436261 intron eIF5B - chr3L 3436340 intron eIF5B - chr3L 3436419 intron eIF5B - chr3L_5_3435001 chr3L_3435001 EF39_1-HE 1552 chr3L 3449321 3449352 chr3L 3449428 3449459 9 107 0.5 8.0 4.2 1.7 138 chr3L 3449321 intron eIF5B - chr3L 3449390 intron eIF5B - chr3L 3449459 intron eIF5B - chr3L_9_3445001 chr3L_3445001 EF39_1-HE 1553 chr3L 3451353 3451377 chr3L 3451479 3451503 7 126 3.0 3.5 3.2 1.7 150 chr3L 3451353 intron eIF5B - chr3L 3451428 intron eIF5B - chr3L 3451503 intron eIF5B - chr3L_7_3450001 chr3L_3450001 EF39_1-HE 1554 chr3L 3475052 3475093 chr3L 3475521 3475562 jockey 8 468 6.0 6.0 6.0 1.1 510 chr3L 3475052 intron CG42324 + chr3L 3475307 intron CG42324 + chr3L 3475562 intron CG42324 + chr3L_8_3475001 chr3L_3475001 EF39_1-HE 1555 chr3L 3486642 3486692 chr3L 3486813 3486816 11 175 4.0 1.5 2.8 2.9 174 chr3L 3486642 intron CG42324 + chr3L 3486729 intron CG42324 + chr3L 3486816 intron CG42324 + chr3L_11_3485001 chr3L_3485001 EF39_1-HE 1556 chr3L 3494170 3494207 chr3L 3494273 3494310 16 103 2.5 8.0 5.2 2.6 140 chr3L 3494170 intron CG42324 + chr3L 3494240 intron CG42324 + chr3L 3494310 intron CG42324 + chr3L_16_3490001 chr3L_3490001 EF39_1-HE 1557 chr3L 3495004 3495056 chr3L 3495162 3495214 23 158 5.0 6.5 5.8 3.4 210 chr3L 3495004 intron CG42324 + chr3L 3495109 intron CG42324 + chr3L 3495214 intron CG42324 + chr3L_23_3495001 chr3L_3495001 EF39_1-HE 1558 chr3L 3503967 3503982 chr3L 3504100 3504115 8 133 0.0 0.0 0.0 8.0 148 chr3L 3503967 intron CG42324 + chr3L 3504041 intron CG42324 + chr3L 3504115 intron CG42324 + chr3L_8_3500001 chr3L_3500001 EF39_1-HE 1559 chr3L 3517981 3518021 chr3L 3518089 3518129 4 108 2.5 2.5 2.5 1.1 148 chr3L 3517981 intron Eip63E + chr3L 3518055 intron Eip63E + chr3L 3518129 intron Eip63E + chr3L_4_3515001 chr3L_3515001 EF39_1-HE 1560 chr3L 3522682 3522736 chr3L 3522788 3522838 5 105 1.5 3.5 2.5 1.4 156 chr3L 3522682 intron Eip63E + chr3L 3522760 intron Eip63E + chr3L 3522838 intron Eip63E + chr3L_5_3520001 chr3L_3520001 EF39_1-HE 1561 chr3L 3530676 3530728 chr3L 3530780 3530836 14 106 4.5 0.0 2.2 4.4 160 chr3L 3530676 intron Eip63E + chr3L 3530756 intron Eip63E + chr3L 3530836 intron Eip63E + chr3L_14_3530001 chr3L_3530001 EF39_1-HE 1562 chr3L 3544385 3544418 chr3L 3544521 3544554 11 135 0.0 5.5 2.8 2.9 169 chr3L 3544385 intron Eip63E + chr3L 3544470 intron Eip63E + chr3L 3544554 intron Eip63E + chr3L_11_3540001 chr3L_3540001 EF39_1-HE 1563 chr3L 3566374 3566425 chr3L 3566483 3566534 18 109 3.5 8.0 5.8 2.6 160 chr3L 3566374 intron Eip63E + chr3L 3566454 intron Eip63E + chr3L 3566534 intron Eip63E + chr3L_18_3565001 chr3L_3565001 EF39_1-HE 1564 chr3L 3573143 3573193 chr3L 3573252 3573302 24 109 3.0 4.0 3.5 5.3 159 chr3L 3573143 intron Eip63E + chr3L 3573222 intron Eip63E + chr3L 3573302 intron Eip63E + chr3L_24_3570001 chr3L_3570001 EF39_1-HE 1565 chr3L 3581762 3581775 chr3L 3581873 3581886 4 111 1.0 4.0 2.5 1.1 124 chr3L 3581762 intron Eip63E + chr3L 3581824 intron Eip63E + chr3L 3581886 intron Eip63E + chr3L_4_3580001 chr3L_3580001 EF39_1-HE 1566 chr3L 3593876 3593884 chr3L 3593984 3593992 4 108 5.5 0.0 2.8 1.1 116 chr3L 3593876 intron,5` UTR Eip63E +,snRNA:U7 + chr3L 3593934 intron Eip63E + chr3L 3593992 intron Eip63E + chr3L_4_3590001 chr3L_3590001 EF39_1-HE 1567 chr3L 3601273 3601324 chr3L 3606610 3606661 copia 12 5337 3.0 2.5 2.8 3.2 5388 chr3L 3601273 intron Eip63E + chr3L 3603967 intron Eip63E + chr3L 3606661 intron Eip63E + chr3L_12_3600001 chr3L_3600001 EF39_1-HE 1568 chr3L 3627170 3627213 chr3L 3627276 3627318 7 105 6.0 6.0 6.0 1.0 148 chr3L 3627170 intron dar1 + chr3L 3627244 intron dar1 + chr3L 3627318 intron dar1 + chr3L_7_3625001 chr3L_3625001 EF39_1-HE 1569 chr3L 3662484 3662527 chr3L 3662598 3662641 12 114 0.5 3.0 1.8 4.3 157 chr3L 3662484 intergenic not near genes chr3L 3662562 intergenic not near genes chr3L 3662641 intergenic not near genes chr3L_12_3660001 chr3L_3660001 EF39_1-HE 1570 chr3L 3719700 3719752 chr3L 3719806 3719858 21 106 3.0 5.5 4.2 4.0 158 chr3L 3719700 intron CG32264 - chr3L 3719779 intron CG32264 - chr3L 3719858 intron CG32264 - chr3L_21_3715001 chr3L_3715001 EF39_1-HE 1571 chr3L 3763743 3763778 chr3L 3763850 3763885 12 106 4.5 4.0 4.2 2.3 142 chr3L 3763743 intron CG32264 - chr3L 3763814 intron CG32264 - chr3L 3763885 intron CG32264 - chr3L_12_3760001 chr3L_3760001 EF39_1-HE 1572 chr3L 3783248 3783264 chr3L 3783351 3783367 4 103 7.0 3.5 5.2 0.6 119 chr3L 3783248 intron CG32264 - chr3L 3783308 intron CG32264 - chr3L 3783367 intron CG32264 - chr3L_4_3780001 chr3L_3780001 EF39_1-HE 1573 chr3L 3797224 3797265 chr3L 3797333 3797374 15 109 0.0 3.0 1.5 6.0 150 chr3L 3797224 intron CG32264 - chr3L 3797299 intron CG32264 - chr3L 3797374 intron CG32264 - chr3L_15_3795001 chr3L_3795001 EF39_1-HE 1574 chr3L 3814803 3814841 chr3L 3815204 3815259 4 405 0.0 1.0 0.5 2.7 456 chr3L 3814803 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815031 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815259 intron Scsalpha + chr3L_4_3815001 chr3L_3815001 EF39_1-HE 1575 chr3L 3833715 3833753 chr3L 3833981 3834020 pogo 10 267 6.0 2.0 4.0 2.0 305 chr3L 3833715 intron enc + chr3L 3833868 intron enc + chr3L 3834020 intron enc + chr3L_10_3830001 chr3L_3830001 EF39_1-HE 1576 chr3L 3873880 3873939 chr3L 3873991 3874050 9 110 3.0 1.5 2.2 2.8 170 chr3L 3873880 intergenic not near genes chr3L 3873965 intergenic not near genes chr3L 3874050 intergenic not near genes chr3L_9_3870001 chr3L_3870001 EF39_1-HE 1577 chr3L 3875236 3875269 chr3L 3875342 3875375 10 106 2.5 4.5 3.5 2.2 139 chr3L 3875236 intergenic not near genes chr3L 3875306 intergenic not near genes chr3L 3875375 intergenic not near genes chr3L_10_3875001 chr3L_3875001 EF39_1-HE 1578 chr3L 3977614 3977620 chr3L 3977717 3977723 4 103 21.0 10.0 15.5 0.2 109 chr3L 3977614 intergenic not near genes chr3L 3977668 intergenic not near genes chr3L 3977723 intergenic not near genes chr3L_4_3975001 chr3L_3975001 EF39_1-HE 1579 chr3L 3977621 3977653 chr3L 3977716 3977756 18 102 13.0 10.0 11.5 1.4 135 chr3L 3977621 intergenic not near genes chr3L 3977688 intergenic not near genes chr3L 3977756 intergenic not near genes chr3L_18_3975001 chr3L_3975001 EF39_1-HE 1580 chr3L 4015712 4015762 chr3L 4015820 4015871 25 109 4.5 3.0 3.8 5.2 159 chr3L 4015712 intergenic not near genes chr3L 4015792 intergenic not near genes chr3L 4015871 intergenic not near genes chr3L_25_4015001 chr3L_4015001 EF39_1-HE 1581 chr3L 4030708 4030733 chr3L 4030989 4031014 6 281 4.0 7.0 5.5 0.9 306 chr3L 4030708 3` UTR,exon Gr64b +,Gr64c + chr3L 4030861 3` UTR,exon Gr64b +,Gr64c + chr3L 4031014 3` UTR,exon Gr64b +,Gr64c + chr3L_6_4030001 chr3L_4030001 EF39_1-HE 1582 chr3L 4168210 4168231 chr3L 4168315 4168336 8 105 0.0 7.0 3.5 1.8 126 chr3L 4168210 intergenic CR44529 - chr3L 4168273 3` UTR CR44529 - chr3L 4168336 3` UTR CR44529 - chr3L_8_4165001 chr3L_4165001 EF39_1-HE 1583 chr3L 4210890 4210942 chr3L 4210996 4211047 18 104 0.0 6.0 3.0 4.5 157 chr3L 4210890 intron,3` UTR CG43367 +,Cpr64Ab - chr3L 4210968 intron,3` UTR CG43367 +,Cpr64Ab - chr3L 4211047 intron,exon CG43367 +,Cpr64Ab - chr3L_18_4210001 chr3L_4210001 EF39_1-HE 1584 chr3L 4233067 4233113 chr3L 4233181 4233227 16 114 4.5 2.0 3.2 3.8 160 chr3L 4233067 intron ImpL2 - chr3L 4233147 intron ImpL2 - chr3L 4233227 intron ImpL2 - chr3L_16_4230001 chr3L_4230001 EF39_1-HE 1585 chr3L 4238721 4238745 chr3L 4238834 4238858 4 113 0.0 0.0 0.0 4.0 137 chr3L 4238721 intergenic not near genes chr3L 4238790 intergenic not near genes chr3L 4238858 intergenic not near genes chr3L_4_4235001 chr3L_4235001 EF39_1-HE 1586 chr3L 4328729 4328758 chr3L 4336252 4336279 412 6 7523 5.0 6.0 5.5 0.9 7550 chr3L 4328729 intron Cip4 - chr3L 4332504 intron Cip4 - chr3L 4336279 exon Cip4 - chr3L_6_4330001 chr3L_4330001 EF39_1-HE 1587 chr3L 4342383 4342437 chr3L 4342488 4342542 20 104 4.5 6.0 5.2 3.2 159 chr3L 4342383 intron Cip4 - chr3L 4342462 intron Cip4 - chr3L 4342542 intron Cip4 - chr3L_20_4340001 chr3L_4340001 EF39_1-HE 1588 chr3L 4342730 4342737 chr3L 4342836 4342843 5 106 4.0 17.0 10.5 0.4 113 chr3L 4342730 intron Cip4 - chr3L 4342786 intron Cip4 - chr3L 4342843 intron Cip4 - chr3L_5_4340001 chr3L_4340001 EF39_1-HE 1589 chr3L 4343460 4343520 chr3L 4343567 4343643 5 112 0.5 0.0 0.2 4.2 183 chr3L 4343460 intron Cip4 - chr3L 4343552 intron Cip4 - chr3L 4343643 intron Cip4 - chr3L_5_4340001 chr3L_4340001 EF39_1-HE 1590 chr3L 4360972 4360995 chr3L 4362846 4362868 6 1874 4.5 7.0 5.8 0.9 1896 chr3L 4360972 intron Cip4 - chr3L 4361920 intron Cip4 - chr3L 4362868 intron Cip4 - chr3L_6_4360001 chr3L_4360001 EF39_1-HE 1591 chr3L 4441291 4441327 chr3L 4441516 4441552 5 225 0.5 0.0 0.2 4.2 261 chr3L 4441291 intergenic not near genes chr3L 4441422 intergenic not near genes chr3L 4441552 intergenic not near genes chr3L_5_4440001 chr3L_4440001 EF39_1-HE 1592 chr3L 4536341 4536374 chr3L 4536468 4536501 10 127 3.0 6.0 4.5 1.8 160 chr3L 4536341 exon CG11353 + chr3L 4536421 intron CG11353 + chr3L 4536501 intron CG11353 + chr3L_10_4535001 chr3L_4535001 EF39_1-HE 1593 chr3L 4589516 4589529 chr3L 4589619 4589632 5 103 1.5 4.0 2.8 1.3 116 chr3L 4589516 intron CG42540 + chr3L 4589574 intron CG42540 + chr3L 4589632 intron CG42540 + chr3L_5_4585001 chr3L_4585001 EF39_1-HE 1594 chr3L 4597197 4597248 chr3L 4597304 4597356 8 108 3.0 5.0 4.0 1.6 159 chr3L 4597197 intron Src64B - chr3L 4597276 intron Src64B - chr3L 4597356 intron Src64B - chr3L_8_4595001 chr3L_4595001 EF39_1-HE 1595 chr3L 4607244 4607292 chr3L 4607360 4607409 11 115 2.0 6.0 4.0 2.2 165 chr3L 4607244 intron Src64B - chr3L 4607326 intron Src64B - chr3L 4607409 intron Src64B - chr3L_11_4605001 chr3L_4605001 EF39_1-HE 1596 chr3L 4608145 4608196 chr3L 4608305 4608356 17 160 5.0 6.0 5.5 2.6 211 chr3L 4608145 intron Src64B - chr3L 4608250 intron Src64B - chr3L 4608356 intron Src64B - chr3L_17_4605001 chr3L_4605001 EF39_1-HE 1597 chr3L 4658865 4658905 chr3L 4658975 4659016 14 110 2.0 3.0 2.5 4.0 151 chr3L 4658865 intron axo - chr3L 4658940 intron axo - chr3L 4659016 intron axo - chr3L_14_4655001 chr3L_4655001 EF39_1-HE 1598 chr3L 4680136 4680176 chr3L 4680261 4680300 5 125 3.5 4.0 3.8 1.0 164 chr3L 4680136 intron axo - chr3L 4680218 intron axo - chr3L 4680300 intron axo - chr3L_5_4680001 chr3L_4680001 EF39_1-HE 1599 chr3L 4901106 4901129 chr3L 4907322 4907345 diver 6 6216 5.0 0.0 2.5 1.7 6239 chr3L 4901106 intergenic CG13704 + chr3L 4904226 intergenic not near genes chr3L 4907345 intergenic not near genes chr3L_6_4900001 chr3L_4900001 EF39_1-HE 1600 chr3L 4907895 4907910 chr3L 4908041 4908056 4 146 3.5 1.0 2.2 1.2 161 chr3L 4907895 intergenic not near genes chr3L 4907976 intergenic not near genes chr3L 4908056 intergenic not near genes chr3L_4_4905001 chr3L_4905001 EF39_1-HE 1601 chr3L 4940977 4941029 chr3L 4941081 4941133 14 104 6.5 2.5 4.5 2.5 156 chr3L 4940977 intron Con - chr3L 4941055 intron Con - chr3L 4941133 intron Con - chr3L_14_4940001 chr3L_4940001 EF39_1-HE 1602 chr3L 4957489 4957530 chr3L 4957595 4957636 13 106 3.0 6.5 4.8 2.2 147 chr3L 4957489 intron Con - chr3L 4957562 intron Con - chr3L 4957636 intron Con - chr3L_13_4955001 chr3L_4955001 EF39_1-HE 1603 chr3L 4969522 4969579 chr3L 4969695 4969752 25 172 5.0 6.5 5.8 3.7 230 chr3L 4969522 intron Con - chr3L 4969637 intron Con - chr3L 4969752 intron Con - chr3L_25_4965001 chr3L_4965001 EF39_1-HE 1604 chr3L 4979811 4979831 chr3L 4979913 4979933 9 102 1.5 4.5 3.0 2.2 122 chr3L 4979811 intron Con - chr3L 4979872 intron Con - chr3L 4979933 intron Con - chr3L_9_4975001 chr3L_4975001 EF39_1-HE 1605 chr3L 4985342 4985381 chr3L 4985446 4985485 7 104 4.0 0.5 2.2 2.2 143 chr3L 4985342 intron Con - chr3L 4985414 intron Con - chr3L 4985485 intron Con - chr3L_7_4985001 chr3L_4985001 EF39_1-HE 1606 chr3L 4997015 4997055 chr3L 4997164 4997205 6 150 5.0 2.5 3.8 1.2 190 chr3L 4997015 intron Con - chr3L 4997110 intron Con - chr3L 4997205 intron Con - chr3L_6_4995001 chr3L_4995001 EF39_1-HE 1607 chr3L 5034131 5034181 chr3L 5043309 5043359 roo 12 9178 5.0 2.0 3.5 2.7 9228 chr3L 5034131 intron Con - chr3L 5038745 intron Con - chr3L 5043359 intron Con - chr3L_12_5035001 chr3L_5035001 EF39_1-HE 1608 chr3L 5045440 5045476 chr3L 5050247 5050283 Doc 7 4807 7.5 0.5 4.0 1.4 4843 chr3L 5045440 intron Con - chr3L 5047862 intron Con - chr3L 5050283 intron Con - chr3L_7_5045001 chr3L_5045001 EF39_1-HE 1609 chr3L 5051438 5051474 chr3L 5051552 5051588 11 114 4.0 6.5 5.2 1.8 150 chr3L 5051438 intron,3` UTR Con -,CR43884 - chr3L 5051513 intron Con - chr3L 5051588 intron Con - chr3L_11_5050001 chr3L_5050001 EF39_1-HE 1610 chr3L 5089079 5089136 chr3L 5089192 5089240 9 105 0.0 2.5 1.2 4.1 161 chr3L 5089079 intergenic not near genes chr3L 5089160 intergenic not near genes chr3L 5089240 intergenic not near genes chr3L_9_5085001 chr3L_5085001 EF39_1-HE 1611 chr3L 5101206 5101222 chr3L 5101312 5101328 5 106 0.0 2.0 1.0 2.5 122 chr3L 5101206 intergenic not near genes chr3L 5101267 intergenic not near genes chr3L 5101328 intergenic not near genes chr3L_5_5100001 chr3L_5100001 EF39_1-HE 1612 chr3L 5164611 5164668 chr3L 5164713 5164761 10 101 2.5 4.0 3.2 2.4 150 chr3L 5164611 intron shep - chr3L 5164686 intron shep - chr3L 5164761 intron shep - chr3L_10_5160001 chr3L_5160001 EF39_1-HE 1613 chr3L 5183342 5183380 chr3L 5183451 5183496 8 112 1.0 8.0 4.5 1.5 154 chr3L 5183342 intron shep - chr3L 5183419 intron shep - chr3L 5183496 intron shep - chr3L_8_5180001 chr3L_5180001 EF39_1-HE 1614 chr3L 5203078 5203102 chr3L 5203208 5203232 8 130 0.0 3.5 1.8 2.9 154 chr3L 5203078 intron shep - chr3L 5203155 intron shep - chr3L 5203232 intron shep - chr3L_8_5200001 chr3L_5200001 EF39_1-HE 1615 chr3L 5251846 5251860 chr3L 5251951 5251965 6 105 5.5 9.5 7.5 0.7 119 chr3L 5251846 intron shep - chr3L 5251906 intron shep - chr3L 5251965 intron shep - chr3L_6_5250001 chr3L_5250001 EF39_1-HE 1616 chr3L 5261152 5261174 chr3L 5261257 5261279 5 105 4.5 5.0 4.8 0.9 127 chr3L 5261152 intron shep - chr3L 5261216 intron shep - chr3L 5261279 intron shep - chr3L_5_5260001 chr3L_5260001 EF39_1-HE 1617 chr3L 5271128 5271162 chr3L 5271245 5271285 7 121 0.0 0.5 0.2 5.8 157 chr3L 5271128 intron shep - chr3L 5271206 intron shep - chr3L 5271285 intron shep - chr3L_7_5270001 chr3L_5270001 EF39_1-HE 1618 chr3L 5349924 5349984 chr3L 5350033 5350093 20 109 4.0 3.0 3.5 4.4 169 chr3L 5349924 intron lama - chr3L 5350008 intron lama - chr3L 5350093 intron lama - chr3L_20_5350001 chr3L_5350001 EF39_1-HE 1619 chr3L 5376018 5376032 chr3L 5376123 5376137 4 105 0.0 3.5 1.8 1.4 119 chr3L 5376018 intergenic not near genes chr3L 5376078 intergenic not near genes chr3L 5376137 intergenic not near genes chr3L_4_5375001 chr3L_5375001 EF39_1-HE 1620 chr3L 5396472 5396495 chr3L 5396585 5396607 5 113 0.0 6.0 3.0 1.2 135 chr3L 5396472 intergenic not near genes chr3L 5396540 intergenic not near genes chr3L 5396607 intergenic not near genes chr3L_5_5395001 chr3L_5395001 EF39_1-HE 1621 chr3L 5441243 5441293 chr3L 5441351 5441401 8 108 3.5 1.5 2.5 2.3 158 chr3L 5441243 3` UTR CG34391 + chr3L 5441322 3` UTR CG34391 + chr3L 5441401 3` UTR CG34391 + chr3L_8_5440001 chr3L_5440001 EF39_1-HE 1622 chr3L 5471745 5471796 chr3L 5471863 5471914 20 117 3.0 6.5 4.8 3.4 169 chr3L 5471745 intergenic not near genes chr3L 5471830 intergenic not near genes chr3L 5471914 intergenic not near genes chr3L_20_5470001 chr3L_5470001 EF39_1-HE 1623 chr3L 5504537 5504569 chr3L 5504641 5504673 12 104 3.5 3.0 3.2 2.9 136 chr3L 5504537 intron CG34342 - chr3L 5504605 intron CG34342 - chr3L 5504673 intron CG34342 - chr3L_12_5500001 chr3L_5500001 EF39_1-HE 1624 chr3L 5515836 5515894 chr3L 5515945 5516000 17 107 8.5 3.5 6.0 2.4 164 chr3L 5515836 exon Lkr - chr3L 5515918 intron Lkr - chr3L 5516000 exon Lkr - chr3L_17_5515001 chr3L_5515001 EF39_1-HE 1625 chr3L 5519723 5519831 chr3L 5519826 5519934 8 112 0.0 0.0 0.0 8.0 211 chr3L 5519723 intron Lkr - chr3L 5519828 intron Lkr - chr3L 5519934 intron Lkr - chr3L_8_5515001 chr3L_5515001 EF39_1-HE 1626 chr3L 5524715 5524770 chr3L 5524832 5524887 25 116 3.0 1.0 2.0 8.3 172 chr3L 5524715 intron Lkr - chr3L 5524801 intron Lkr - chr3L 5524887 intron Lkr - chr3L_25_5520001 chr3L_5520001 EF39_1-HE 1627 chr3L 5610249 5610291 chr3L 5610391 5610439 15 148 5.0 4.0 4.5 2.7 190 chr3L 5610249 intergenic not near genes chr3L 5610344 intergenic not near genes chr3L 5610439 intergenic not near genes chr3L_15_5610001 chr3L_5610001 EF39_1-HE 1628 chr3L 5677163 5677186 chr3L 5677265 5677288 6 99 0.0 2.5 1.2 2.7 125 chr3L 5677163 intron sif + chr3L 5677226 intron sif + chr3L 5677288 intron sif + chr3L_6_5675001 chr3L_5675001 EF39_1-HE 1629 chr3L 5744876 5744926 chr3L 5744979 5745029 14 103 4.0 6.0 5.0 2.3 153 chr3L 5744876 intron sif + chr3L 5744952 intron sif + chr3L 5745029 intron sif + chr3L_14_5740001 chr3L_5740001 EF39_1-HE 1630 chr3L 5788682 5788721 chr3L 5788789 5788827 7 107 2.0 4.0 3.0 1.8 145 chr3L 5788682 intergenic not near genes chr3L 5788754 intergenic not near genes chr3L 5788827 intergenic not near genes chr3L_7_5785001 chr3L_5785001 EF39_1-HE 1631 chr3L 5836358 5836403 chr3L 5836465 5836510 12 106 5.5 3.0 4.2 2.3 152 chr3L 5836358 intron vn - chr3L 5836434 intron vn - chr3L 5836510 intron vn - chr3L_12_5835001 chr3L_5835001 EF39_1-HE 1632 chr3L 5841906 5841958 chr3L 5842010 5842063 20 104 7.0 5.5 6.2 2.8 157 chr3L 5841906 intron vn - chr3L 5841984 intron vn - chr3L 5842063 intron vn - chr3L_20_5840001 chr3L_5840001 EF39_1-HE 1633 chr3L 5843331 5843602 chr3L 5843434 5843707 21 103 24.5 11.5 18.0 1.1 376 chr3L 5843331 exon vn - chr3L 5843519 exon vn - chr3L 5843707 5` UTR vn - chr3L_21_5840001 chr3L_5840001 EF39_1-HE 1634 chr3L 5910016 5910031 chr3L 5910283 5910298 pogo 4 267 3.0 4.5 3.8 0.8 282 chr3L 5910016 intron CG13288 + chr3L 5910157 intron CG13288 + chr3L 5910298 intron CG13288 + chr3L_4_5910001 chr3L_5910001 EF39_1-HE 1635 chr3L 5926296 5926335 chr3L 5926512 5926551 BS 7 216 3.0 3.0 3.0 1.8 255 chr3L 5926296 intron Vap-33B + chr3L 5926424 intron Vap-33B + chr3L 5926551 intron Vap-33B + chr3L_7_5925001 chr3L_5925001 EF39_1-HE 1636 chr3L 6001658 6001714 chr3L 6004384 6004440 jockey 18 2726 6.5 1.5 4.0 3.6 2782 chr3L 6001658 intron PVRAP + chr3L 6003049 intron PVRAP + chr3L 6004440 intron PVRAP + chr3L_18_6000001 chr3L_6000001 EF39_1-HE 1637 chr3L 6040343 6040364 chr3L 6042725 6042746 Doc 6 2382 7.5 6.5 7.0 0.8 2403 chr3L 6040343 intergenic Jon65Aiv + chr3L 6041544 intergenic not near genes chr3L 6042746 intergenic not near genes chr3L_6_6040001 chr3L_6040001 EF39_1-HE 1638 chr3L 6040370 6040379 chr3L 6042749 6042761 Doc 6 2380 5.0 10.5 7.8 0.7 2391 chr3L 6040370 intergenic Jon65Aiv + chr3L 6041566 intergenic not near genes chr3L 6042761 intergenic not near genes chr3L_6_6040001 chr3L_6040001 EF39_1-HE 1639 chr3L 6050337 6050381 chr3L 6050445 6050506 6 115 3.0 0.0 1.5 2.4 169 chr3L 6050337 intergenic Jon65Aiii + chr3L 6050422 intergenic Jon65Aiii + chr3L 6050506 intergenic Jon65Aiii + chr3L_6_6050001 chr3L_6050001 EF39_1-HE 1640 chr3L 6052634 6052662 chr3L 6052745 6052773 10 109 8.5 10.5 9.5 1.0 139 chr3L 6052634 exon Jon65Aii + chr3L 6052704 intron Jon65Aii + chr3L 6052773 exon Jon65Aii + chr3L_10_6050001 chr3L_6050001 EF39_1-HE 1641 chr3L 6116674 6116727 chr3L 6116784 6116837 8 104 4.5 9.5 7.0 1.0 163 chr3L 6116674 intron Ets65A + chr3L 6116756 intron Ets65A + chr3L 6116837 intron Ets65A + chr3L_8_6115001 chr3L_6115001 EF39_1-HE 1642 chr3L 6129289 6129328 chr3L 6129395 6129434 11 106 5.5 4.0 4.8 1.9 145 chr3L 6129289 intergenic l(3)mbn - chr3L 6129362 intergenic not near genes chr3L 6129434 intergenic not near genes chr3L_11_6125001 chr3L_6125001 EF39_1-HE 1643 chr3L 6155669 6155699 chr3L 6155781 6155811 7 112 4.5 2.0 3.2 1.7 142 chr3L 6155669 intergenic CR45421 - chr3L 6155740 intergenic not near genes chr3L 6155811 intergenic not near genes chr3L_7_6155001 chr3L_6155001 EF39_1-HE 1644 chr3L 6162351 6162376 chr3L 6162458 6162480 4 106 1.0 5.5 3.2 1.0 129 chr3L 6162351 intergenic CR45744 - chr3L 6162416 intergenic CR45744 - chr3L 6162480 intergenic CR45744 - chr3L_4_6160001 chr3L_6160001 EF39_1-HE 1645 chr3L 6220903 6220935 chr3L 6230081 6230113 roo 8 9178 2.5 3.5 3.0 2.0 9210 chr3L 6220903 5` UTR pncr008:3L + chr3L 6225508 intergenic not near genes chr3L 6230113 intergenic not near genes chr3L_8_6225001 chr3L_6225001 EF39_1-HE 1646 chr3L 6334983 6335028 chr3L 6335480 6335525 297 15 497 7.0 7.5 7.2 1.8 542 chr3L 6334983 intron CG13300 - chr3L 6335254 intron CG13300 - chr3L 6335525 intron CG13300 - chr3L_15_6335001 chr3L_6335001 EF39_1-HE 1647 chr3L 6337405 6337432 chr3L 6337516 6337543 7 110 1.5 5.0 3.2 1.7 138 chr3L 6337405 intron CG13300 - chr3L 6337474 intron CG13300 - chr3L 6337543 intron CG13300 - chr3L_7_6335001 chr3L_6335001 EF39_1-HE 1648 chr3L 6353350 6353375 chr3L 6353455 6353467 8 102 9.0 4.0 6.5 1.1 117 chr3L 6353350 intergenic not near genes chr3L 6353408 intergenic not near genes chr3L 6353467 intergenic not near genes chr3L_8_6350001 chr3L_6350001 EF39_1-HE 1649 chr3L 6389044 6389098 chr3L 6389146 6389200 10 97 0.0 2.0 1.0 5.0 156 chr3L 6389044 intergenic not near genes chr3L 6389122 intergenic not near genes chr3L 6389200 intergenic not near genes chr3L_10_6385001 chr3L_6385001 EF39_1-HE 1650 chr3L 6405650 6405682 chr3L 6432140 6432172 roo 8 26489 5.5 7.0 6.2 1.1 26522 chr3L 6405650 intron CG42747 + chr3L 6418911 intron CG42747 + chr3L 6432172 intron CG42747 + chr3L_8_6415001 chr3L_6415001 EF39_1-HE 1651 chr3L 6525372 6525397 chr3L 6525480 6525505 12 108 8.0 10.5 9.2 1.2 133 chr3L 6525372 intron sfl + chr3L 6525438 intron sfl + chr3L 6525505 intron sfl + chr3L_12_6525001 chr3L_6525001 EF39_1-HE 1652 chr3L 6549245 6549249 chr3L 6549351 6549355 4 106 0.5 14.0 7.2 0.5 110 chr3L 6549245 3` UTR sfl + chr3L 6549300 3` UTR sfl + chr3L 6549355 3` UTR sfl + chr3L_4_6545001 chr3L_6545001 EF39_1-HE 1653 chr3L 6562831 6562862 chr3L 6562937 6562968 10 106 6.5 9.5 8.0 1.1 137 chr3L 6562831 intron CG18769 + chr3L 6562900 intron CG18769 + chr3L 6562968 intron CG18769 + chr3L_10_6560001 chr3L_6560001 EF39_1-HE 1654 chr3L 6585972 6586016 chr3L 6586277 6586321 11 305 3.0 5.5 4.2 2.1 349 chr3L 6585972 intron,intron CG18769 +,jv - chr3L 6586146 intron,intron CG18769 +,jv - chr3L 6586321 intron,intron CG18769 +,jv - chr3L_11_6585001 chr3L_6585001 EF39_1-HE 1655 chr3L 6620586 6620601 chr3L 6621052 6621067 Rt1c 9 466 5.0 13.0 9.0 0.9 481 chr3L 6620586 intergenic not near genes chr3L 6620826 intergenic not near genes chr3L 6621067 intergenic not near genes chr3L_9_6620001 chr3L_6620001 EF39_1-HE 1656 chr3L 6621714 6621753 chr3L 6621923 6621962 11 208 3.0 4.5 3.8 2.3 248 chr3L 6621714 intergenic not near genes chr3L 6621838 intergenic not near genes chr3L 6621962 intergenic not near genes chr3L_11_6620001 chr3L_6620001 EF39_1-HE 1657 chr3L 6639973 6639996 chr3L 6640102 6640129 5 133 5.0 3.5 4.2 1.0 156 chr3L 6639973 intergenic not near genes chr3L 6640051 intergenic not near genes chr3L 6640129 intergenic not near genes chr3L_5_6640001 chr3L_6640001 EF39_1-HE 1658 chr3L 6642861 6642872 chr3L 6642950 6642978 5 101 1.5 0.0 0.8 2.8 117 chr3L 6642861 intergenic CR45239 + chr3L 6642920 intergenic CR45239 + chr3L 6642978 intergenic CR45239 + chr3L_5_6640001 chr3L_6640001 EF39_1-HE 1659 chr3L 6649134 6649185 chr3L 6649252 6649303 15 118 4.0 3.5 3.8 3.1 169 chr3L 6649134 intergenic not near genes chr3L 6649218 intergenic not near genes chr3L 6649303 intergenic not near genes chr3L_15_6645001 chr3L_6645001 EF39_1-HE 1660 chr3L 6687477 6687524 chr3L 6687619 6687666 13 137 5.5 2.5 4.0 2.6 189 chr3L 6687477 intergenic not near genes chr3L 6687572 intergenic not near genes chr3L 6687666 intergenic not near genes chr3L_13_6685001 chr3L_6685001 EF39_1-HE 1661 chr3L 6781097 6781147 chr3L 6783136 6783186 Doc 13 2039 6.5 3.0 4.8 2.2 2089 chr3L 6781097 intergenic not near genes chr3L 6782142 intergenic not near genes chr3L 6783186 intergenic not near genes chr3L_13_6780001 chr3L_6780001 EF39_1-HE 1662 chr3L 6806017 6806072 chr3L 6806177 6806208 25 159 5.0 6.0 5.5 3.8 191 chr3L 6806017 intergenic not near genes chr3L 6806112 intergenic not near genes chr3L 6806208 intergenic not near genes chr3L_25_6805001 chr3L_6805001 EF39_1-HE 1663 chr3L 6832516 6832564 chr3L 6832627 6832675 22 110 9.0 7.5 8.2 2.4 159 chr3L 6832516 intergenic not near genes chr3L 6832596 intergenic not near genes chr3L 6832675 intergenic not near genes chr3L_22_6830001 chr3L_6830001 EF39_1-HE 1664 chr3L 6835904 6835924 chr3L 6836008 6836028 12 104 9.0 4.5 6.8 1.5 124 chr3L 6835904 intergenic not near genes chr3L 6835966 intergenic not near genes chr3L 6836028 intergenic not near genes chr3L_12_6835001 chr3L_6835001 EF39_1-HE 1665 chr3L 6847024 6847062 chr3L 6847124 6847166 15 101 0.0 8.0 4.0 3.0 142 chr3L 6847024 intergenic not near genes chr3L 6847095 intergenic not near genes chr3L 6847166 intergenic not near genes chr3L_15_6845001 chr3L_6845001 EF39_1-HE 1666 chr3L 6855913 6855951 chr3L 6860721 6860762 Doc 7 4807 3.5 4.5 4.0 1.4 4849 chr3L 6855913 intergenic not near genes chr3L 6858338 intergenic not near genes chr3L 6860762 intergenic not near genes chr3L_7_6855001 chr3L_6855001 EF39_1-HE 1667 chr3L 6887491 6887537 chr3L 6895009 6895055 roo 9 7518 2.5 0.0 1.2 4.1 7564 chr3L 6887491 intergenic not near genes chr3L 6891273 intergenic not near genes chr3L 6895055 intergenic not near genes chr3L_9_6890001 chr3L_6890001 EF39_1-HE 1668 chr3L 6907989 6908047 chr3L 6908100 6908151 9 106 3.0 0.0 1.5 3.6 162 chr3L 6907989 intergenic not near genes chr3L 6908070 intergenic not near genes chr3L 6908151 intergenic not near genes chr3L_9_6905001 chr3L_6905001 EF39_1-HE 1669 chr3L 6934326 6934360 chr3L 6934463 6934497 5 137 5.0 3.0 4.0 1.0 171 chr3L 6934326 exon CG14820 + chr3L 6934412 intron CG14820 + chr3L 6934497 exon CG14820 + chr3L_5_6930001 chr3L_6930001 EF39_1-HE 1670 chr3L 6993501 6993529 chr3L 6993609 6993637 9 108 4.0 5.5 4.8 1.6 136 chr3L 6993501 intron bin + chr3L 6993569 intron bin + chr3L 6993637 intron bin + chr3L_9_6990001 chr3L_6990001 EF39_1-HE 1671 chr3L 6994875 6994909 chr3L 6995512 6995546 BS 7 637 0.0 1.5 0.8 3.9 671 chr3L 6994875 intergenic bin + chr3L 6995210 intergenic not near genes chr3L 6995546 intergenic not near genes chr3L_7_6995001 chr3L_6995001 EF39_1-HE 1672 chr3L 7021087 7021132 chr3L 7021211 7021256 14 124 3.0 6.5 4.8 2.4 169 chr3L 7021087 intron Mp + chr3L 7021172 intron Mp + chr3L 7021256 intron Mp + chr3L_14_7020001 chr3L_7020001 EF39_1-HE 1673 chr3L 7041897 7041925 chr3L 7042000 7042028 7 103 1.5 2.5 2.0 2.3 131 chr3L 7041897 intron Mp + chr3L 7041962 intron Mp + chr3L 7042028 intron Mp + chr3L_7_7040001 chr3L_7040001 EF39_1-HE 1674 chr3L 7048954 7049008 chr3L 7049059 7049112 13 103 1.0 4.0 2.5 3.7 158 chr3L 7048954 exon Mp + chr3L 7049033 intron Mp + chr3L 7049112 intron Mp + chr3L_13_7045001 chr3L_7045001 EF39_1-HE 1675 chr3L 7078570 7078616 chr3L 7078691 7078737 17 119 1.5 5.0 3.2 4.0 167 chr3L 7078570 intergenic not near genes chr3L 7078654 intergenic not near genes chr3L 7078737 intergenic not near genes chr3L_17_7075001 chr3L_7075001 EF39_1-HE 1676 chr3L 7104029 7104074 chr3L 7104159 7104204 22 130 6.5 2.5 4.5 4.0 175 chr3L 7104029 intron form3 + chr3L 7104116 intron form3 + chr3L 7104204 intron form3 + chr3L_22_7100001 chr3L_7100001 EF39_1-HE 1677 chr3L 7106333 7106371 chr3L 7106514 7106544 8 179 1.5 2.5 2.0 2.7 211 chr3L 7106333 intron form3 + chr3L 7106438 intron form3 + chr3L 7106544 intron form3 + chr3L_8_7105001 chr3L_7105001 EF39_1-HE 1678 chr3L 7112566 7112607 chr3L 7112678 7112720 7 113 4.5 6.5 5.5 1.1 154 chr3L 7112566 intron form3 + chr3L 7112643 intron form3 + chr3L 7112720 intron form3 + chr3L_7_7110001 chr3L_7110001 EF39_1-HE 1679 chr3L 7129932 7129975 chr3L 7130150 7130193 BS 4 218 3.0 2.0 2.5 1.1 261 chr3L 7129932 intergenic CG15829 + chr3L 7130062 intergenic CG15829 + chr3L 7130193 intergenic not near genes chr3L_4_7130001 chr3L_7130001 EF39_1-HE 1680 chr3L 7150022 7150035 chr3L 7150127 7150140 4 105 0.0 4.5 2.2 1.2 118 chr3L 7150022 intron corn - chr3L 7150081 intron corn - chr3L 7150140 intron corn - chr3L_4_7150001 chr3L_7150001 EF39_1-HE 1681 chr3L 7187385 7187406 chr3L 7187493 7187514 6 108 0.0 0.0 0.0 6.0 129 chr3L 7187385 intron Dscam2 - chr3L 7187450 intron Dscam2 - chr3L 7187514 intron Dscam2 - chr3L_6_7185001 chr3L_7185001 EF39_1-HE 1682 chr3L 7274699 7274716 chr3L 7274829 7274846 6 130 5.0 5.0 5.0 1.0 147 chr3L 7274699 intron unc-13-4A - chr3L 7274772 intron unc-13-4A - chr3L 7274846 intron unc-13-4A - chr3L_6_7270001 chr3L_7270001 EF39_1-HE 1683 chr3L 7308163 7308220 chr3L 7308265 7308304 18 101 3.0 4.5 3.8 3.8 141 chr3L 7308163 intron unc-13-4A - chr3L 7308234 intron unc-13-4A - chr3L 7308304 intron unc-13-4A - chr3L_18_7305001 chr3L_7305001 EF39_1-HE 1684 chr3L 7317995 7318021 chr3L 7318108 7318134 6 113 0.5 8.0 4.2 1.2 139 chr3L 7317995 intergenic not near genes chr3L 7318064 intergenic not near genes chr3L 7318134 intergenic not near genes chr3L_6_7315001 chr3L_7315001 EF39_1-HE 1685 chr3L 7328925 7328975 chr3L 7329032 7329082 8 107 4.0 0.0 2.0 2.7 157 chr3L 7328925 intergenic CG8602 -,CG42307 +,mus312 + chr3L 7329004 intergenic CG42307 +,mus312 +,CG8602 - chr3L 7329082 intergenic CG42307 +,mus312 +,CG8602 - chr3L_8_7325001 chr3L_7325001 EF39_1-HE 1686 chr3L 7366203 7366235 chr3L 7366307 7366344 6 107 4.0 4.0 4.0 1.2 141 chr3L 7366203 intron Sh3beta - chr3L 7366274 intron Sh3beta - chr3L 7366344 intron Sh3beta - chr3L_6_7365001 chr3L_7365001 EF39_1-HE 1687 chr3L 7377293 7377334 chr3L 7380424 7380465 297 7 3131 2.5 3.0 2.8 1.8 3172 chr3L 7377293 intron SMSr - chr3L 7378879 intron SMSr - chr3L 7380465 intron SMSr - chr3L_7_7375001 chr3L_7375001 EF39_1-HE 1688 chr3L 7391774 7391825 chr3L 7391899 7391948 4 124 1.0 1.5 1.2 1.8 174 chr3L 7391774 intron CG8563 + chr3L 7391861 intron CG8563 + chr3L 7391948 intron CG8563 + chr3L_4_7390001 chr3L_7390001 EF39_1-HE 1689 chr3L 7443995 7444020 chr3L 7444119 7444144 4 124 4.5 0.0 2.2 1.2 149 chr3L 7443995 intron CG42458 + chr3L 7444070 intron CG42458 + chr3L 7444144 intron CG42458 + chr3L_4_7440001 chr3L_7440001 EF39_1-HE 1690 chr3L 7480028 7480072 chr3L 7480143 7480187 5 115 1.5 0.0 0.8 2.8 159 chr3L 7480028 intergenic not near genes chr3L 7480108 intergenic not near genes chr3L 7480187 intergenic not near genes chr3L_5_7480001 chr3L_7480001 EF39_1-HE 1691 chr3L 7481688 7481734 chr3L 7481818 7481864 7 130 1.0 2.5 1.8 2.5 176 chr3L 7481688 intergenic not near genes chr3L 7481776 intergenic not near genes chr3L 7481864 intergenic not near genes chr3L_7_7480001 chr3L_7480001 EF39_1-HE 1692 chr3L 7498747 7498785 chr3L 7503544 7503588 F-element 7 4802 6.0 3.0 4.5 1.3 4841 chr3L 7498747 5` UTR CG8539 - chr3L 7501168 intergenic not near genes chr3L 7503588 intergenic not near genes chr3L_7_7500001 chr3L_7500001 EF39_1-HE 1693 chr3L 7505390 7505442 chr3L 7505492 7505544 13 102 2.5 5.0 3.8 2.7 154 chr3L 7505390 intergenic CG7548 - chr3L 7505467 intergenic CG7548 - chr3L 7505544 3` UTR CG7548 - chr3L_13_7505001 chr3L_7505001 EF39_1-HE 1694 chr3L 7507347 7507402 chr3L 7507450 7507506 21 104 4.0 7.5 5.8 3.1 159 chr3L 7507347 intergenic not near genes chr3L 7507426 intergenic not near genes chr3L 7507506 intergenic not near genes chr3L_21_7505001 chr3L_7505001 EF39_1-HE 1695 chr3L 7524148 7524160 chr3L 7524271 7524283 5 123 5.0 0.0 2.5 1.4 135 chr3L 7524148 intron ltl + chr3L 7524216 intron ltl + chr3L 7524283 intron ltl + chr3L_5_7520001 chr3L_7520001 EF39_1-HE 1696 chr3L 7542150 7542170 chr3L 7542443 7542463 5 293 2.0 4.5 3.2 1.2 313 chr3L 7542150 exon CG32376 - chr3L 7542306 exon CG32376 - chr3L 7542463 intergenic CG32376 - chr3L_5_7540001 chr3L_7540001 EF39_1-HE 1697 chr3L 7560636 7560657 chr3L 7560751 7560772 8 115 0.5 10.0 5.2 1.3 136 chr3L 7560636 intergenic not near genes chr3L 7560704 intergenic not near genes chr3L 7560772 intergenic not near genes chr3L_8_7560001 chr3L_7560001 EF39_1-HE 1698 chr3L 7574843 7574851 chr3L 7574946 7574954 4 103 0.0 2.5 1.2 1.8 111 chr3L 7574843 intergenic not near genes chr3L 7574898 intergenic not near genes chr3L 7574954 intergenic not near genes chr3L_4_7570001 chr3L_7570001 EF39_1-HE 1699 chr3L 7576185 7576223 chr3L 7576299 7576337 8 114 5.0 4.5 4.8 1.4 152 chr3L 7576185 intergenic not near genes chr3L 7576261 intergenic not near genes chr3L 7576337 intergenic not near genes chr3L_8_7575001 chr3L_7575001 EF39_1-HE 1700 chr3L 7593681 7593738 chr3L 7593798 7593854 16 117 4.0 3.0 3.5 3.6 173 chr3L 7593681 intron CG33275 + chr3L 7593768 intron CG33275 + chr3L 7593854 intron CG33275 + chr3L_16_7590001 chr3L_7590001 EF39_1-HE 1701 chr3L 7640622 7640670 chr3L 7640725 7640773 7 103 2.5 2.0 2.2 2.2 151 chr3L 7640622 intergenic CG7506 -,CG33276 - chr3L 7640698 intergenic CG7506 -,CG33276 - chr3L 7640773 intergenic CG7506 -,CG33276 - chr3L_7_7640001 chr3L_7640001 EF39_1-HE 1702 chr3L 7745766 7745800 chr3L 7745899 7745933 11 133 4.0 4.5 4.2 2.1 167 chr3L 7745766 intron CG32373 + chr3L 7745850 intron CG32373 + chr3L 7745933 intron CG32373 + chr3L_11_7745001 chr3L_7745001 EF39_1-HE 1703 chr3L 7769267 7769295 chr3L 7769387 7769415 14 120 5.5 2.5 4.0 2.8 148 chr3L 7769267 intron Clk - chr3L 7769341 intron Clk - chr3L 7769415 intron Clk - chr3L_14_7765001 chr3L_7765001 EF39_1-HE 1704 chr3L 7769296 7769306 chr3L 7769416 7769426 8 120 4.5 4.5 4.5 1.5 130 chr3L 7769296 intron Clk - chr3L 7769361 intron Clk - chr3L 7769426 intron Clk - chr3L_8_7765001 chr3L_7765001 EF39_1-HE 1705 chr3L 7793694 7793739 chr3L 7800772 7800817 297 10 7078 4.5 2.5 3.5 2.2 7123 chr3L 7793694 intron CG32369 - chr3L 7797256 intron CG32369 - chr3L 7800817 intron CG32369 - chr3L_10_7795001 chr3L_7795001 EF39_1-HE 1706 chr3L 7822077 7822122 chr3L 7822181 7822225 17 104 9.0 5.0 7.0 2.1 148 chr3L 7822077 intron Pdp1 - chr3L 7822151 intron Pdp1 - chr3L 7822225 intron Pdp1 - chr3L_17_7820001 chr3L_7820001 EF39_1-HE 1707 chr3L 7856543 7856589 chr3L 7856691 7856737 20 148 5.0 8.0 6.5 2.7 194 chr3L 7856543 intron Pdp1 - chr3L 7856640 intron Pdp1 - chr3L 7856737 intron Pdp1 - chr3L_20_7855001 chr3L_7855001 EF39_1-HE 1708 chr3L 7863252 7863271 chr3L 7863356 7863375 10 104 12.5 6.0 9.2 1.0 123 chr3L 7863252 intron Pdp1 - chr3L 7863314 intron Pdp1 - chr3L 7863375 intron Pdp1 - chr3L_10_7860001 chr3L_7860001 EF39_1-HE 1709 chr3L 7886490 7886546 chr3L 7889034 7889089 Stalker4 9 2544 4.5 4.5 4.5 1.6 2599 chr3L 7886490 intron CG32365 + chr3L 7887790 intron CG32365 + chr3L 7889089 intron CG32365 + chr3L_9_7885001 chr3L_7885001 EF39_1-HE 1710 chr3L 7889412 7889445 chr3L 7889515 7889547 4 102 0.0 7.0 3.5 0.9 135 chr3L 7889412 intron CG32365 + chr3L 7889480 intron CG32365 + chr3L 7889547 intron CG32365 + chr3L_4_7885001 chr3L_7885001 EF39_1-HE 1711 chr3L 7916808 7916854 chr3L 7926005 7926051 roo 14 9197 4.0 2.5 3.2 3.3 9243 chr3L 7916808 3` UTR syd - chr3L 7921430 intron syd - chr3L 7926051 3` UTR syd - chr3L_14_7920001 chr3L_7920001 EF39_1-HE 1712 chr3L 7967339 7967343 chr3L 17695510 17695513 4 9728171 14.5 14.5 14.5 0.3 9728174 chr3L 7967339 intergenic not near genes chr3L 12831426 intron CG10960 - chr3L 17695513 intron Ccn + chr3L_4_12830001 chr3L_12830001 EF39_1-HE 1713 chr3L 7985348 7985385 chr3L 7987703 7987740 NOF 12 2355 4.5 5.0 4.8 2.1 2392 chr3L 7985348 intron nmo + chr3L 7986544 intron nmo + chr3L 7987740 intron nmo + chr3L_12_7985001 chr3L_7985001 EF39_1-HE 1714 chr3L 7992746 7992798 chr3L 7992852 7992869 14 103 3.0 3.0 3.0 3.5 123 chr3L 7992746 intron nmo + chr3L 7992808 intron nmo + chr3L 7992869 intron nmo + chr3L_14_7990001 chr3L_7990001 EF39_1-HE 1715 chr3L 7995934 7995981 chr3L 7996068 7996115 25 134 5.5 2.5 4.0 5.0 181 chr3L 7995934 intron nmo + chr3L 7996024 intron nmo + chr3L 7996115 intron nmo + chr3L_25_7995001 chr3L_7995001 EF39_1-HE 1716 chr3L 7997990 7998044 chr3L 7998272 7998324 8 281 2.0 2.5 2.2 2.5 334 chr3L 7997990 intron nmo + chr3L 7998157 intron nmo + chr3L 7998324 intron nmo + chr3L_8_7995001 chr3L_7995001 EF39_1-HE 1717 chr3L 8019692 8019714 chr3L 8024115 8024148 NOF 6 4438 2.0 2.0 2.0 2.0 4456 chr3L 8019692 intron nmo + chr3L 8021920 intron nmo + chr3L 8024148 intron nmo + chr3L_6_8020001 chr3L_8020001 EF39_1-HE 1718 chr3L 8030235 8030294 chr3L 8030350 8030409 11 115 1.0 2.5 1.8 3.9 174 chr3L 8030235 intron nmo + chr3L 8030322 intron nmo + chr3L 8030409 intron nmo + chr3L_11_8030001 chr3L_8030001 EF39_1-HE 1719 chr3L 8035692 8035707 chr3L 8035804 8035819 5 112 10.0 0.0 5.0 0.8 127 chr3L 8035692 intron nmo + chr3L 8035756 intron nmo + chr3L 8035819 intron nmo + chr3L_5_8035001 chr3L_8035001 EF39_1-HE 1720 chr3L 8062829 8062931 chr3L 8062934 8063093 11 115 0.0 0.0 0.0 11.0 264 chr3L 8062829 intergenic not near genes chr3L 8062961 intergenic not near genes chr3L 8063093 intergenic not near genes chr3L_11_8060001 chr3L_8060001 EF39_1-HE 1721 chr3L 8081252 8081311 chr3L 8081381 8081440 11 129 3.0 5.0 4.0 2.2 188 chr3L 8081252 intron Ect4 + chr3L 8081346 intron Ect4 + chr3L 8081440 intron Ect4 + chr3L_11_8080001 chr3L_8080001 EF39_1-HE 1722 chr3L 8211572 8211600 chr3L 8211685 8211713 10 113 3.5 6.0 4.8 1.7 141 chr3L 8211572 intergenic CG8006 + chr3L 8211642 intergenic CG8006 + chr3L 8211713 intergenic CG8006 + chr3L_10_8210001 chr3L_8210001 EF39_1-HE 1723 chr3L 8225254 8225303 chr3L 8225377 8225426 25 123 4.5 6.0 5.2 4.0 172 chr3L 8225254 intergenic not near genes chr3L 8225340 intergenic not near genes chr3L 8225426 intergenic not near genes chr3L_25_8225001 chr3L_8225001 EF39_1-HE 1724 chr3L 8226687 8226701 chr3L 8226812 8226826 4 123 6.0 0.0 3.0 1.0 139 chr3L 8226687 intergenic not near genes chr3L 8226756 intergenic not near genes chr3L 8226826 intergenic not near genes chr3L_4_8225001 chr3L_8225001 EF39_1-HE 1725 chr3L 8233565 8233584 chr3L 8238853 8238872 Rt1a 8 5288 3.5 8.5 6.0 1.1 5307 chr3L 8233565 intron CG7213 - chr3L 8236218 intron CG7213 - chr3L 8238872 intron,intron CG7213 -,Dscam4 + chr3L_8_8235001 chr3L_8235001 EF39_1-HE 1726 chr3L 8274810 8274815 chr3L 8274950 8274955 4 140 7.0 0.0 3.5 0.9 145 chr3L 8274810 intron Dscam4 + chr3L 8274882 intron Dscam4 + chr3L 8274955 intron Dscam4 + chr3L_4_8270001 chr3L_8270001 EF39_1-HE 1727 chr3L 8286889 8286928 chr3L 8286997 8287036 10 108 2.5 3.0 2.8 2.6 147 chr3L 8286889 intron cert - chr3L 8286962 intron cert - chr3L 8287036 intron cert - chr3L_10_8285001 chr3L_8285001 EF39_1-HE 1728 chr3L 8295775 8295818 chr3L 8295959 8296002 12 184 3.0 5.5 4.2 2.3 227 chr3L 8295775 intergenic CG7201 - chr3L 8295888 intergenic not near genes chr3L 8296002 intergenic not near genes chr3L_12_8295001 chr3L_8295001 EF39_1-HE 1729 chr3L 8326586 8326591 chr3L 8326715 8326720 4 129 0.0 11.5 5.8 0.6 134 chr3L 8326586 intron CG34461 + chr3L 8326653 intron CG34461 + chr3L 8326720 intron CG34461 + chr3L_4_8325001 chr3L_8325001 EF39_1-HE 1730 chr3L 8361245 8361287 chr3L 8361383 8361425 11 138 0.5 4.0 2.2 3.4 180 chr3L 8361245 intergenic Idh - chr3L 8361335 intergenic Idh - chr3L 8361425 intergenic not near genes chr3L_11_8360001 chr3L_8360001 EF39_1-HE 1731 chr3L 8412782 8412812 chr3L 8412887 8412916 4 105 5.0 3.0 4.0 0.8 134 chr3L 8412782 5` UTR,exon Oseg1 -,Exo70 + chr3L 8412849 intron Exo70 + chr3L 8412916 intron Exo70 + chr3L_4_8410001 chr3L_8410001 EF39_1-HE 1732 chr3L 8443543 8443572 chr3L 8443650 8443679 5 107 1.5 4.0 2.8 1.3 136 chr3L 8443543 3` UTR CG6983 - chr3L 8443611 3` UTR CG6983 - chr3L 8443679 3` UTR CG6983 - chr3L_5_8440001 chr3L_8440001 EF39_1-HE 1733 chr3L 8445705 8445731 chr3L 8445807 8445833 7 102 1.0 4.5 2.8 1.8 128 chr3L 8445705 intron CG6983 - chr3L 8445769 intron CG6983 - chr3L 8445833 intron CG6983 - chr3L_7_8445001 chr3L_8445001 EF39_1-HE 1734 chr3L 8456448 8456484 chr3L 8456569 8456605 13 121 10.0 11.5 10.8 1.1 157 chr3L 8456448 intron Gug + chr3L 8456526 intron Gug + chr3L 8456605 intron Gug + chr3L_13_8455001 chr3L_8455001 EF39_1-HE 1735 chr3L 8481775 8481806 chr3L 8490960 8490991 roo 10 9185 1.5 2.0 1.8 3.6 9216 chr3L 8481775 intron CG43163 - chr3L 8486383 intron CG43163 - chr3L 8490991 intron CG43163 - chr3L_10_8485001 chr3L_8485001 EF39_1-HE 1736 chr3L 8497881 8497916 chr3L 8498007 8498048 8 131 0.5 1.5 1.0 4.0 167 chr3L 8497881 intron CG43163 - chr3L 8497964 intron CG43163 - chr3L 8498048 intron CG43163 - chr3L_8_8495001 chr3L_8495001 EF39_1-HE 1737 chr3L 8498294 8498328 chr3L 8505788 8505821 blood 8 7493 0.0 3.0 1.5 3.2 7527 chr3L 8498294 intron CG43163 - chr3L 8502058 intron CG43163 - chr3L 8505821 intron CG43163 - chr3L_8_8500001 chr3L_8500001 EF39_1-HE 1738 chr3L 8714156 8714210 chr3L 8714276 8714331 10 120 4.0 3.5 3.8 2.1 175 chr3L 8714156 intergenic not near genes chr3L 8714244 intergenic not near genes chr3L 8714331 intergenic not near genes chr3L_10_8710001 chr3L_8710001 EF39_1-HE 1739 chr3L 8791260 8791267 chr3L 8796706 8796710 I-element 6 5446 5.0 0.0 2.5 1.7 5450 chr3L 8791260 exon Fhos + chr3L 8793985 intron Fhos + chr3L 8796710 intron Fhos + chr3L_6_8790001 chr3L_8790001 EF39_1-HE 1740 chr3L 8791286 8791308 chr3L 8796704 8796753 I-element 7 5437 4.0 0.0 2.0 2.3 5467 chr3L 8791286 exon Fhos + chr3L 8794020 intron Fhos + chr3L 8796753 intron Fhos + chr3L_7_8790001 chr3L_8790001 EF39_1-HE 1741 chr3L 8811836 8811877 chr3L 8811954 8811972 9 116 1.5 1.5 1.5 3.6 136 chr3L 8811836 intergenic not near genes chr3L 8811904 intergenic not near genes chr3L 8811972 intergenic not near genes chr3L_9_8810001 chr3L_8810001 EF39_1-HE 1742 chr3L 8841360 8841420 chr3L 8841513 8841572 20 152 2.5 2.0 2.2 6.2 212 chr3L 8841360 intron dally + chr3L 8841466 intron dally + chr3L 8841572 intron dally + chr3L_20_8840001 chr3L_8840001 EF39_1-HE 1743 chr3L 8842761 8842799 chr3L 8842869 8842907 7 107 2.0 6.0 4.0 1.4 146 chr3L 8842761 intron dally + chr3L 8842834 intron dally + chr3L 8842907 intron dally + chr3L_7_8840001 chr3L_8840001 EF39_1-HE 1744 chr3L 8860012 8860057 chr3L 8860126 8860176 5 117 0.0 4.5 2.2 1.6 164 chr3L 8860012 intron dally + chr3L 8860094 intron dally + chr3L 8860176 intron dally + chr3L_5_8860001 chr3L_8860001 EF39_1-HE 1745 chr3L 8884377 8884389 chr3L 8884602 8884611 4 224 6.0 0.5 3.2 1.0 234 chr3L 8884377 intron dally + chr3L 8884494 intron dally + chr3L 8884611 intron dally + chr3L_4_8880001 chr3L_8880001 EF39_1-HE 1746 chr3L 8921408 8921464 chr3L 8921513 8921569 9 105 2.5 3.5 3.0 2.2 161 chr3L 8921408 intron Tsp66E + chr3L 8921488 intron Tsp66E + chr3L 8921569 intron Tsp66E + chr3L_9_8920001 chr3L_8920001 EF39_1-HE 1747 chr3L 8950535 8950575 chr3L 8950655 8950694 9 118 5.5 4.5 5.0 1.5 159 chr3L 8950535 intron,intron CG43783 -,orb2 - chr3L 8950614 intron,intron CG43783 -,orb2 - chr3L 8950694 intron,intron CG43783 -,orb2 - chr3L_9_8950001 chr3L_8950001 EF39_1-HE 1748 chr3L 8966548 8966600 chr3L 8966653 8966705 9 103 0.0 2.5 1.2 4.1 157 chr3L 8966548 intergenic CG5653 -,CG5021 + chr3L 8966626 intergenic CG5021 +,CG5653 - chr3L 8966705 intergenic CG5021 +,CG5653 - chr3L_9_8965001 chr3L_8965001 EF39_1-HE 1749 chr3L 9003918 9003975 chr3L 9004029 9004086 14 111 3.5 1.5 2.5 4.0 168 chr3L 9003918 intergenic not near genes chr3L 9004002 intergenic not near genes chr3L 9004086 intergenic not near genes chr3L_14_9000001 chr3L_9000001 EF39_1-HE 1750 chr3L 9009940 9009963 chr3L 9010070 9010093 5 130 2.0 1.5 1.8 1.8 153 chr3L 9009940 intergenic CG5194 - chr3L 9010016 intergenic CG5194 - chr3L 9010093 intergenic CG5194 - chr3L_5_9010001 chr3L_9010001 EF39_1-HE 1751 chr3L 9011107 9011141 chr3L 9011220 9011254 7 113 3.0 1.0 2.0 2.3 147 chr3L 9011107 intergenic not near genes chr3L 9011180 intergenic not near genes chr3L 9011254 intergenic not near genes chr3L_7_9010001 chr3L_9010001 EF39_1-HE 1752 chr3L 9018222 9018278 chr3L 9018327 9018383 13 105 2.0 3.0 2.5 3.7 161 chr3L 9018222 intron Doc2 - chr3L 9018302 intron Doc2 - chr3L 9018383 intron Doc2 - chr3L_13_9015001 chr3L_9015001 EF39_1-HE 1753 chr3L 9048592 9048641 chr3L 9048710 9048763 6 121 2.0 1.0 1.5 2.4 171 chr3L 9048592 exon CG5144 + chr3L 9048678 3` UTR CG5144 + chr3L 9048763 intergenic CG5144 +,Argk - chr3L_6_9045001 chr3L_9045001 EF39_1-HE 1754 chr3L 9051475 9051525 chr3L 9051649 9051699 11 173 5.5 4.0 4.8 1.9 224 chr3L 9051475 intron Argk - chr3L 9051587 intron Argk - chr3L 9051699 intron Argk - chr3L_11_9050001 chr3L_9050001 EF39_1-HE 1755 chr3L 9076927 9076955 chr3L 9084513 9084541 412 5 7586 3.5 10.5 7.0 0.6 7614 chr3L 9076927 exon Tequila + chr3L 9080734 intron Tequila + chr3L 9084541 exon Tequila + chr3L_5_9080001 chr3L_9080001 EF39_1-HE 1756 chr3L 9125772 9125786 chr3L 9125875 9125889 5 103 10.0 4.5 7.2 0.6 117 chr3L 9125772 intron bol - chr3L 9125830 intron bol - chr3L 9125889 intron bol - chr3L_5_9125001 chr3L_9125001 EF39_1-HE 1757 chr3L 9130531 9130575 chr3L 9134318 9134362 412 9 3787 6.5 5.5 6.0 1.3 3831 chr3L 9130531 intergenic bol - chr3L 9132446 intergenic not near genes chr3L 9134362 intergenic Dhpr + chr3L_9_9130001 chr3L_9130001 EF39_1-HE 1758 chr3L 9164673 9164701 chr3L 9166163 9166194 hobo 12 1493 11.5 0.0 5.8 1.8 1521 chr3L 9164673 intron Rdl - chr3L 9165434 intron Rdl - chr3L 9166194 intron Rdl - chr3L_12_9165001 chr3L_9165001 EF39_1-HE 1759 chr3L 9180720 9180776 chr3L 9180918 9180967 34 197 11.5 5.0 8.2 3.7 247 chr3L 9180720 intron Rdl - chr3L 9180844 intron Rdl - chr3L 9180967 intron Rdl - chr3L_34_9180001 chr3L_9180001 EF39_1-HE 1760 chr3L 9213216 9213227 chr3L 9213322 9213333 6 106 7.5 1.5 4.5 1.1 117 chr3L 9213216 intron CG4476 + chr3L 9213274 intron CG4476 + chr3L 9213333 intron CG4476 + chr3L_6_9210001 chr3L_9210001 EF39_1-HE 1761 chr3L 9219221 9219267 chr3L 9219918 9219965 jockey 27 697 5.0 6.5 5.8 4.0 744 chr3L 9219221 intergenic not near genes chr3L 9219593 intergenic not near genes chr3L 9219965 intergenic not near genes chr3L_27_9215001 chr3L_9215001 EF39_1-HE 1762 chr3L 9270592 9270645 chr3L 9278373 9278426 roo 14 7779 5.0 3.0 4.0 2.8 7834 chr3L 9270592 intron GluRIB + chr3L 9274509 intron GluRIB + chr3L 9278426 exon GluRIB + chr3L_14_9270001 chr3L_9270001 EF39_1-HE 1763 chr3L 9283427 9283477 chr3L 9283552 9283602 12 125 3.0 1.0 2.0 4.0 175 chr3L 9283427 intron GluRIB + chr3L 9283514 intron GluRIB + chr3L 9283602 intron GluRIB + chr3L_12_9280001 chr3L_9280001 EF39_1-HE 1764 chr3L 9348448 9348465 chr3L 9348976 9348993 6 526 4.5 0.0 2.2 1.9 545 chr3L 9348448 intergenic PGRP-LC + chr3L 9348720 intergenic PGRP-LC + chr3L 9348993 intergenic not near genes chr3L_6_9345001 chr3L_9345001 EF39_1-HE 1765 chr3L 9443491 9443539 chr3L 9445308 9445353 S-element 6 1816 1.5 1.5 1.5 2.4 1862 chr3L 9443491 intron CG33926 + chr3L 9444422 intron CG33926 + chr3L 9445353 intron CG33926 + chr3L_6_9440001 chr3L_9440001 EF39_1-HE 1766 chr3L 9501678 9501733 chr3L 9502187 9502242 roo 4 509 0.5 3.0 1.8 1.4 564 chr3L 9501678 intron path - chr3L 9501960 intron path - chr3L 9502242 intron path - chr3L_4_9500001 chr3L_9500001 EF39_1-HE 1767 chr3L 9515615 9515654 chr3L 9515747 9515787 6 133 3.0 3.0 3.0 1.5 172 chr3L 9515615 intron CG33700 - chr3L 9515701 intron CG33700 - chr3L 9515787 intron CG33700 - chr3L_6_9515001 chr3L_9515001 EF39_1-HE 1768 chr3L 9533731 9533786 chr3L 9541317 9541372 412 14 7586 3.0 5.5 4.2 2.7 7641 chr3L 9533731 intergenic not near genes chr3L 9537552 intergenic not near genes chr3L 9541372 intergenic not near genes chr3L_14_9535001 chr3L_9535001 EF39_1-HE 1769 chr3L 9571885 9571932 chr3L 9572258 9572306 jockey 12 374 6.5 5.0 5.8 1.8 421 chr3L 9571885 intron CG42673 + chr3L 9572096 intron CG42673 + chr3L 9572306 intron CG42673 + chr3L_12_9570001 chr3L_9570001 EF39_1-HE 1770 chr3L 9575884 9575941 chr3L 9580988 9581046 jockey 18 5104 6.5 6.5 6.5 2.4 5162 chr3L 9575884 intron CG42673 + chr3L 9578465 intron CG42673 + chr3L 9581046 intron CG42673 + chr3L_18_9575001 chr3L_9575001 EF39_1-HE 1771 chr3L 9665834 9665887 chr3L 9666073 9666126 8 239 2.0 5.5 3.8 1.7 292 chr3L 9665834 intron fry - chr3L 9665980 intron fry - chr3L 9666126 intron fry - chr3L_8_9665001 chr3L_9665001 EF39_1-HE 1772 chr3L 9697754 9697783 chr3L 9697872 9697901 11 118 7.0 6.0 6.5 1.5 147 chr3L 9697754 intergenic not near genes chr3L 9697828 intergenic not near genes chr3L 9697901 intergenic UbcD4 + chr3L_11_9695001 chr3L_9695001 EF39_1-HE 1773 chr3L 9738585 9738613 chr3L 9738814 9738842 12 229 2.5 1.5 2.0 4.0 257 chr3L 9738585 intron CG42268 - chr3L 9738714 intron CG42268 - chr3L 9738842 intron CG42268 - chr3L_12_9735001 chr3L_9735001 EF39_1-HE 1774 chr3L 9745463 9745518 chr3L 9745575 9745630 18 111 4.5 4.0 4.2 3.5 167 chr3L 9745463 intron CG42268 - chr3L 9745546 intron CG42268 - chr3L 9745630 intron CG42268 - chr3L_18_9745001 chr3L_9745001 EF39_1-HE 1775 chr3L 9809710 9809719 chr3L 9809813 9809822 4 103 5.5 1.5 3.5 0.9 112 chr3L 9809710 intergenic not near genes chr3L 9809766 intergenic not near genes chr3L 9809822 intergenic not near genes chr3L_4_9805001 chr3L_9805001 EF39_1-HE 1776 chr3L 9824129 9824180 chr3L 9824234 9824293 22 104 3.0 0.0 1.5 8.8 164 chr3L 9824129 intron CG43897 + chr3L 9824211 intron CG43897 + chr3L 9824293 intron CG43897 + chr3L_22_9820001 chr3L_9820001 EF39_1-HE 1777 chr3L 9922722 9922766 chr3L 9922840 9922878 8 116 2.5 6.0 4.2 1.5 156 chr3L 9922722 intron CG34356 + chr3L 9922800 intron CG34356 + chr3L 9922878 intron CG34356 + chr3L_8_9920001 chr3L_9920001 EF39_1-HE 1778 chr3L 9983056 9983109 chr3L 9983178 9983232 7 122 3.0 3.0 3.0 1.8 176 chr3L 9983056 intron dpr6 + chr3L 9983144 intron dpr6 + chr3L 9983232 intron dpr6 + chr3L_7_9980001 chr3L_9980001 EF39_1-HE 1779 chr3L 10060097 10060116 chr3L 10067702 10067721 17.6 8 7604 9.0 4.0 6.5 1.1 7624 chr3L 10060097 intron dpr6 + chr3L 10063909 intron dpr6 + chr3L 10067721 intron dpr6 + chr3L_8_10060001 chr3L_10060001 EF39_1-HE 1780 chr3L 10082540 10082579 chr3L 10082648 10082687 7 108 1.0 5.5 3.2 1.7 147 chr3L 10082540 intron dpr6 + chr3L 10082614 intron dpr6 + chr3L 10082687 intron dpr6 + chr3L_7_10080001 chr3L_10080001 EF39_1-HE 1781 chr3L 10085040 10085074 chr3L 10085747 10085781 8 707 3.5 4.5 4.0 1.6 741 chr3L 10085040 intron dpr6 + chr3L 10085410 intron dpr6 + chr3L 10085781 intron dpr6 + chr3L_8_10085001 chr3L_10085001 EF39_1-HE 1782 chr3L 10099060 10099115 chr3L 10099171 10099226 9 111 2.5 4.5 3.5 2.0 166 chr3L 10099060 intron dpr6 + chr3L 10099143 intron dpr6 + chr3L 10099226 intron dpr6 + chr3L_9_10095001 chr3L_10095001 EF39_1-HE 1783 chr3L 10117435 10117464 chr3L 10117733 10117762 10 298 8.0 3.0 5.5 1.5 327 chr3L 10117435 intron dpr6 + chr3L 10117598 intron dpr6 + chr3L 10117762 intron dpr6 + chr3L_10_10115001 chr3L_10115001 EF39_1-HE 1784 chr3L 10132012 10132058 chr3L 10132115 10132161 10 103 4.5 3.5 4.0 2.0 149 chr3L 10132012 intron dpr6 + chr3L 10132086 intron dpr6 + chr3L 10132161 intron dpr6 + chr3L_10_10130001 chr3L_10130001 EF39_1-HE 1785 chr3L 10135270 10135317 chr3L 10135378 10135425 10 108 5.0 4.5 4.8 1.7 155 chr3L 10135270 intron dpr6 + chr3L 10135348 intron dpr6 + chr3L 10135425 intron dpr6 + chr3L_10_10135001 chr3L_10135001 EF39_1-HE 1786 chr3L 10161426 10161458 chr3L 10161531 10161562 9 101 0.0 6.5 3.2 2.1 136 chr3L 10161426 intron dpr10 - chr3L 10161494 intron dpr10 - chr3L 10161562 intron dpr10 - chr3L_9_10160001 chr3L_10160001 EF39_1-HE 1787 chr3L 10214789 10215087 chr3L 10214917 10215197 9 126 8.5 0.0 4.2 1.7 408 chr3L 10214789 intergenic not near genes chr3L 10214993 intergenic not near genes chr3L 10215197 intergenic CG8065 + chr3L_9_10210001 chr3L_10210001 EF39_1-HE 1788 chr3L 10215116 10215116 chr3L 10215206 10215221 4 98 3.5 0.5 2.0 1.3 105 chr3L 10215116 intergenic not near genes chr3L 10215168 intergenic CG8065 + chr3L 10215221 intergenic CG8065 + chr3L_4_10215001 chr3L_10215001 EF39_1-HE 1789 chr3L 10259113 10259167 chr3L 10259225 10259279 18 111 3.5 10.0 6.8 2.3 166 chr3L 10259113 intergenic not near genes chr3L 10259196 intergenic not near genes chr3L 10259279 intergenic not near genes chr3L_18_10255001 chr3L_10255001 EF39_1-HE 1790 chr3L 10298656 10298702 chr3L 10298769 10298815 19 113 1.0 6.0 3.5 4.2 159 chr3L 10298656 intergenic not near genes chr3L 10298736 intergenic not near genes chr3L 10298815 intergenic not near genes chr3L_19_10295001 chr3L_10295001 EF39_1-HE 1791 chr3L 10300063 10300066 chr3L 10300173 10300176 5 110 0.0 6.0 3.0 1.2 113 chr3L 10300063 intergenic not near genes chr3L 10300120 intergenic not near genes chr3L 10300176 intergenic not near genes chr3L_5_10300001 chr3L_10300001 EF39_1-HE 1792 chr3L 10308713 10308765 chr3L 10308816 10308868 13 103 0.5 4.5 2.5 3.7 155 chr3L 10308713 intergenic not near genes chr3L 10308790 intergenic not near genes chr3L 10308868 intergenic not near genes chr3L_13_10305001 chr3L_10305001 EF39_1-HE 1793 chr3L 10328091 10328129 chr3L 10328229 10328267 7 138 4.0 5.0 4.5 1.3 176 chr3L 10328091 intergenic not near genes chr3L 10328179 intergenic not near genes chr3L 10328267 intergenic not near genes chr3L_7_10325001 chr3L_10325001 EF39_1-HE 1794 chr3L 10376460 10376502 chr3L 10376562 10376606 15 104 5.0 7.5 6.2 2.1 146 chr3L 10376460 intergenic not near genes chr3L 10376533 intergenic not near genes chr3L 10376606 intergenic not near genes chr3L_15_10375001 chr3L_10375001 EF39_1-HE 1795 chr3L 10414932 10414971 chr3L 10417330 10417369 Doc 7 2398 3.0 4.5 3.8 1.5 2437 chr3L 10414932 intergenic CG12362 + chr3L 10416150 intergenic not near genes chr3L 10417369 intergenic not near genes chr3L_7_10415001 chr3L_10415001 EF39_1-HE 1796 chr3L 10464552 10464598 chr3L 10464666 10464712 7 114 3.0 3.5 3.2 1.7 160 chr3L 10464552 3` UTR CG32061 + chr3L 10464632 3` UTR CG32061 + chr3L 10464712 intergenic CG32061 +,S-Lap3 + chr3L_7_10460001 chr3L_10460001 EF39_1-HE 1797 chr3L 10493396 10493456 chr3L 10493502 10493563 11 107 4.0 2.5 3.2 2.6 167 chr3L 10493396 intron A2bp1 + chr3L 10493480 intron A2bp1 + chr3L 10493563 intron A2bp1 + chr3L_11_10490001 chr3L_10490001 EF39_1-HE 1798 chr3L 10505647 10505701 chr3L 10505772 10505797 10 118 0.5 2.5 1.5 4.0 150 chr3L 10505647 intron A2bp1 + chr3L 10505722 intron A2bp1 + chr3L 10505797 intron A2bp1 + chr3L_10_10505001 chr3L_10505001 EF39_1-HE 1799 chr3L 10524047 10524096 chr3L 10524159 10524208 15 112 4.5 5.0 4.8 2.6 161 chr3L 10524047 intron A2bp1 + chr3L 10524128 intron A2bp1 + chr3L 10524208 intron A2bp1 + chr3L_15_10520001 chr3L_10520001 EF39_1-HE 1800 chr3L 10537209 10537249 chr3L 10537311 10537351 15 102 1.0 5.5 3.2 3.6 142 chr3L 10537209 intron A2bp1 + chr3L 10537280 intron A2bp1 + chr3L 10537351 intron A2bp1 + chr3L_15_10535001 chr3L_10535001 EF39_1-HE 1801 chr3L 10584253 10584298 chr3L 10584366 10584411 21 113 6.5 5.5 6.0 3.0 158 chr3L 10584253 intron A2bp1 + chr3L 10584332 intron A2bp1 + chr3L 10584411 intron A2bp1 + chr3L_21_10580001 chr3L_10580001 EF39_1-HE 1802 chr3L 10621819 10621878 chr3L 10621932 10621991 11 113 1.0 5.0 3.0 2.8 172 chr3L 10621819 intergenic not near genes chr3L 10621905 intergenic not near genes chr3L 10621991 intergenic not near genes chr3L_11_10620001 chr3L_10620001 EF39_1-HE 1803 chr3L 10658042 10658095 chr3L 10658144 10658197 9 102 4.5 5.5 5.0 1.5 155 chr3L 10658042 intron CG32066 - chr3L 10658120 intron CG32066 - chr3L 10658197 intron CG32066 - chr3L_9_10655001 chr3L_10655001 EF39_1-HE 1804 chr3L 10667255 10667307 chr3L 10667366 10667418 11 110 4.0 4.5 4.2 2.1 163 chr3L 10667255 intron simj + chr3L 10667336 intron simj + chr3L 10667418 intron simj + chr3L_11_10665001 chr3L_10665001 EF39_1-HE 1805 chr3L 10682548 10682598 chr3L 10682651 10682686 20 102 3.5 3.5 3.5 4.4 138 chr3L 10682548 intron simj + chr3L 10682617 intron simj + chr3L 10682686 intron simj + chr3L_20_10680001 chr3L_10680001 EF39_1-HE 1806 chr3L 10718301 10718357 chr3L 10718414 10718470 13 110 2.0 2.5 2.2 4.1 169 chr3L 10718301 intergenic not near genes chr3L 10718386 intergenic not near genes chr3L 10718470 intergenic not near genes chr3L_13_10715001 chr3L_10715001 EF39_1-HE 1807 chr3L 10729776 10729826 chr3L 10729880 10729928 10 104 5.0 0.0 2.5 2.9 152 chr3L 10729776 intergenic not near genes chr3L 10729852 intergenic not near genes chr3L 10729928 intergenic not near genes chr3L_10_10725001 chr3L_10725001 EF39_1-HE 1808 chr3L 10762808 10762862 chr3L 10762918 10762965 16 110 2.5 8.5 5.5 2.5 157 chr3L 10762808 intergenic not near genes chr3L 10762886 intergenic not near genes chr3L 10762965 intergenic not near genes chr3L_16_10760001 chr3L_10760001 EF39_1-HE 1809 chr3L 10935375 10935434 chr3L 10935491 10935550 11 116 1.5 2.5 2.0 3.7 175 chr3L 10935375 intergenic not near genes chr3L 10935462 intergenic not near genes chr3L 10935550 intergenic not near genes chr3L_11_10935001 chr3L_10935001 EF39_1-HE 1810 chr3L 10942037 10942073 chr3L 10942148 10942184 12 111 8.0 6.5 7.2 1.5 147 chr3L 10942037 intergenic not near genes chr3L 10942110 intergenic not near genes chr3L 10942184 intergenic not near genes chr3L_12_10940001 chr3L_10940001 EF39_1-HE 1811 chr3L 10956363 10956386 chr3L 10956482 10956505 8 119 1.5 2.5 2.0 2.7 142 chr3L 10956363 intergenic not near genes chr3L 10956434 intergenic not near genes chr3L 10956505 intergenic not near genes chr3L_8_10955001 chr3L_10955001 EF39_1-HE 1812 chr3L 11053638 11053680 chr3L 11053749 11053785 5 109 0.0 2.0 1.0 2.5 147 chr3L 11053638 intergenic CG7888 + chr3L 11053712 intergenic CG7888 + chr3L 11053785 intergenic CG7888 + chr3L_5_11050001 chr3L_11050001 EF39_1-HE 1813 chr3L 11083434 11083484 chr3L 11083563 11083612 13 129 4.0 4.0 4.0 2.6 178 chr3L 11083434 exon JIL-1 - chr3L 11083523 intron JIL-1 - chr3L 11083612 intron JIL-1 - chr3L_13_11080001 chr3L_11080001 EF39_1-HE 1814 chr3L 11087021 11087087 chr3L 11088853 11088902 S-element 8 1817 0.0 5.0 2.5 2.3 1881 chr3L 11087021 intron JIL-1 - chr3L 11087962 intron JIL-1 - chr3L 11088902 intron JIL-1 - chr3L_8_11085001 chr3L_11085001 EF39_1-HE 1815 chr3L 11105272 11105316 chr3L 11107009 11107053 X-element 10 1736 3.0 3.0 3.0 2.5 1781 chr3L 11105272 intergenic not near genes chr3L 11106162 intergenic not near genes chr3L 11107053 exon CG32073 - chr3L_10_11105001 chr3L_11105001 EF39_1-HE 1816 chr3L 11124433 11124469 chr3L 11124535 11124571 5 102 4.0 2.5 3.2 1.2 138 chr3L 11124433 intron CG42575 + chr3L 11124502 intron CG42575 + chr3L 11124571 intron CG42575 + chr3L_5_11120001 chr3L_11120001 EF39_1-HE 1817 chr3L 11194280 11194323 chr3L 11194424 11194468 10 145 4.0 2.5 3.2 2.4 188 chr3L 11194280 intron GlcAT-P - chr3L 11194374 intron GlcAT-P - chr3L 11194468 intron GlcAT-P - chr3L_10_11190001 chr3L_11190001 EF39_1-HE 1818 chr3L 11241758 11241772 chr3L 11241866 11241880 5 108 2.0 2.5 2.2 1.6 122 chr3L 11241758 intergenic not near genes chr3L 11241819 intergenic not near genes chr3L 11241880 intergenic not near genes chr3L_5_11240001 chr3L_11240001 EF39_1-HE 1819 chr3L 11262977 11263009 chr3L 11263079 11263111 7 102 5.0 4.0 4.5 1.3 134 chr3L 11262977 intergenic not near genes chr3L 11263044 intergenic not near genes chr3L 11263111 intergenic not near genes chr3L_7_11260001 chr3L_11260001 EF39_1-HE 1820 chr3L 11264447 11264476 chr3L 11271425 11271454 17.6 7 6978 6.0 4.5 5.2 1.1 7007 chr3L 11264447 intergenic not near genes chr3L 11267950 intergenic not near genes chr3L 11271454 intergenic not near genes chr3L_7_11265001 chr3L_11265001 EF39_1-HE 1821 chr3L 11277443 11277475 chr3L 11278464 11278496 Rt1a 9 1021 9.0 7.0 8.0 1.0 1053 chr3L 11277443 intergenic not near genes chr3L 11277970 intergenic not near genes chr3L 11278496 intergenic not near genes chr3L_9_11275001 chr3L_11275001 EF39_1-HE 1822 chr3L 11329687 11329717 chr3L 11332918 11332948 jockey 4 3231 2.5 2.5 2.5 1.1 3261 chr3L 11329687 intergenic not near genes chr3L 11331318 intergenic not near genes chr3L 11332948 intergenic not near genes chr3L_4_11330001 chr3L_11330001 EF39_1-HE 1823 chr3L 11334735 11334771 chr3L 11334839 11334875 13 104 2.0 2.0 2.0 4.3 140 chr3L 11334735 intergenic not near genes chr3L 11334805 intergenic not near genes chr3L 11334875 intergenic not near genes chr3L_13_11330001 chr3L_11330001 EF39_1-HE 1824 chr3L 11357228 11357269 chr3L 11357343 11357384 13 112 1.0 3.5 2.2 4.1 156 chr3L 11357228 intergenic not near genes chr3L 11357306 intergenic not near genes chr3L 11357384 intergenic not near genes chr3L_13_11355001 chr3L_11355001 EF39_1-HE 1825 chr3L 11358880 11358924 chr3L 11358983 11359022 9 100 4.5 3.5 4.0 1.8 142 chr3L 11358880 intergenic not near genes chr3L 11358951 intergenic not near genes chr3L 11359022 intergenic not near genes chr3L_9_11355001 chr3L_11355001 EF39_1-HE 1826 chr3L 11405448 11405477 chr3L 11405557 11405586 14 108 11.5 13.5 12.5 1.0 138 chr3L 11405448 intergenic CR44363 + chr3L 11405517 intergenic CR44363 + chr3L 11405586 5` UTR CR44363 + chr3L_14_11405001 chr3L_11405001 EF39_1-HE 1827 chr3L 11456882 11456911 chr3L 11457006 11457035 10 124 6.0 0.0 3.0 2.5 153 chr3L 11456882 intergenic CG12289 - chr3L 11456958 intergenic CG12289 - chr3L 11457035 intergenic CG12289 - chr3L_10_11455001 chr3L_11455001 EF39_1-HE 1828 chr3L 11474601 11474657 chr3L 11474716 11474772 8 115 2.0 0.0 1.0 4.0 171 chr3L 11474601 intergenic Vha16-2 + chr3L 11474686 intergenic Vha16-2 + chr3L 11474772 intergenic Vha16-2 + chr3L_8_11470001 chr3L_11470001 EF39_1-HE 1829 chr3L 11482310 11482318 chr3L 11482412 11482415 4 101 2.5 2.5 2.5 1.1 105 chr3L 11482310 intergenic not near genes chr3L 11482362 intergenic not near genes chr3L 11482415 intergenic not near genes chr3L_4_11480001 chr3L_11480001 EF39_1-HE 1830 chr3L 11488537 11488586 chr3L 11488678 11488729 6 142 3.0 1.0 2.0 2.0 192 chr3L 11488537 exon chrb + chr3L 11488633 intron chrb + chr3L 11488729 intron chrb + chr3L_6_11485001 chr3L_11485001 EF39_1-HE 1831 chr3L 11528230 11528260 chr3L 11528337 11528367 5 107 2.0 3.5 2.8 1.3 137 chr3L 11528230 intron Mob2 - chr3L 11528298 intron Mob2 - chr3L 11528367 intron Mob2 - chr3L_5_11525001 chr3L_11525001 EF39_1-HE 1832 chr3L 11544501 11544532 chr3L 11544610 11544641 10 109 0.0 7.5 3.8 2.1 140 chr3L 11544501 intron Mob2 - chr3L 11544571 intron Mob2 - chr3L 11544641 intron Mob2 - chr3L_10_11540001 chr3L_11540001 EF39_1-HE 1833 chr3L 11548674 11548699 chr3L 11548778 11548803 9 104 0.0 4.5 2.2 2.8 129 chr3L 11548674 intron Mob2 - chr3L 11548738 intron Mob2 - chr3L 11548803 intron Mob2 - chr3L_9_11545001 chr3L_11545001 EF39_1-HE 1834 chr3L 11553701 11553728 chr3L 11553829 11553856 9 128 5.5 3.0 4.2 1.7 155 chr3L 11553701 intron Mob2 - chr3L 11553778 intron Mob2 - chr3L 11553856 intron Mob2 - chr3L_9_11550001 chr3L_11550001 EF39_1-HE 1835 chr3L 11579529 11579583 chr3L 11579661 11579715 28 132 4.5 5.5 5.0 4.7 186 chr3L 11579529 intergenic CG43390 - chr3L 11579622 intergenic CG43390 - chr3L 11579715 intergenic CG43390 - chr3L_28_11575001 chr3L_11575001 EF39_1-HE 1836 chr3L 11580636 11580643 chr3L 11580749 11580757 4 114 0.0 5.0 2.5 1.1 121 chr3L 11580636 intergenic CG43391 - chr3L 11580696 intergenic CG43391 - chr3L 11580757 intergenic CG43391 - chr3L_4_11580001 chr3L_11580001 EF39_1-HE 1837 chr3L 11663755 11663765 chr3L 11663861 11663871 6 106 3.5 0.0 1.8 2.1 116 chr3L 11663755 intron CG32085 - chr3L 11663813 intron CG32085 - chr3L 11663871 intron CG32085 - chr3L_6_11660001 chr3L_11660001 EF39_1-HE 1838 chr3L 11673948 11673974 chr3L 11674050 11674076 5 102 2.5 0.5 1.5 2.0 128 chr3L 11673948 intron CG32085 - chr3L 11674012 intron CG32085 - chr3L 11674076 intron CG32085 - chr3L_5_11670001 chr3L_11670001 EF39_1-HE 1839 chr3L 11723072 11723114 chr3L 11727893 11727935 Doc 12 4821 2.0 2.5 2.2 3.8 4863 chr3L 11723072 3` UTR Bmcp + chr3L 11725504 intron Bmcp + chr3L 11727935 3` UTR Bmcp + chr3L_12_11725001 chr3L_11725001 EF39_1-HE 1840 chr3L 11736452 11736509 chr3L 11736562 11736618 16 110 3.5 2.5 3.0 4.0 166 chr3L 11736452 3` UTR CG6024 - chr3L 11736535 3` UTR CG6024 - chr3L 11736618 3` UTR CG6024 - chr3L_16_11735001 chr3L_11735001 EF39_1-HE 1841 chr3L 11739927 11740155 chr3L 11740031 11740279 29 114 4.0 3.5 3.8 6.0 352 chr3L 11739927 intron CG6024 - chr3L 11740103 intron CG6024 - chr3L 11740279 intron CG6024 - chr3L_29_11740001 chr3L_11740001 EF39_1-HE 1842 chr3L 11743997 11744030 chr3L 11744131 11744164 7 134 6.0 1.5 3.8 1.5 167 chr3L 11743997 exon CG6024 - chr3L 11744080 intron CG6024 - chr3L 11744164 intron CG6024 - chr3L_7_11740001 chr3L_11740001 EF39_1-HE 1843 chr3L 11818994 11819141 chr3L 11819099 11819248 8 106 0.5 0.5 0.5 5.3 254 chr3L 11818994 intron CG5946 - chr3L 11819121 intron CG5946 - chr3L 11819248 intron CG5946 - chr3L_8_11815001 chr3L_11815001 EF39_1-HE 1844 chr3L 11833688 11833705 chr3L 11833818 11833835 5 130 8.5 3.0 5.8 0.7 147 chr3L 11833688 intergenic CycA - chr3L 11833762 intergenic CycA - chr3L 11833835 intergenic CycA - chr3L_5_11830001 chr3L_11830001 EF39_1-HE 1845 chr3L 11838955 11838988 chr3L 11839068 11839101 6 113 2.5 5.0 3.8 1.2 146 chr3L 11838955 intergenic not near genes chr3L 11839028 intergenic not near genes chr3L 11839101 intergenic not near genes chr3L_6_11835001 chr3L_11835001 EF39_1-HE 1846 chr3L 11843734 11843790 chr3L 11843837 11843893 12 102 4.5 2.5 3.5 2.7 159 chr3L 11843734 intergenic not near genes chr3L 11843814 intergenic not near genes chr3L 11843893 intergenic not near genes chr3L_12_11840001 chr3L_11840001 EF39_1-HE 1847 chr3L 11846395 11846418 chr3L 11846529 11846552 8 134 0.5 4.5 2.5 2.3 157 chr3L 11846395 intergenic not near genes chr3L 11846474 intergenic not near genes chr3L 11846552 intergenic not near genes chr3L_8_11845001 chr3L_11845001 EF39_1-HE 1848 chr3L 11854835 11854885 chr3L 11854962 11855012 8 127 3.5 2.0 2.8 2.1 177 chr3L 11854835 exon CG44837 - chr3L 11854924 intron CG44837 - chr3L 11855012 intron CG44837 - chr3L_8_11850001 chr3L_11850001 EF39_1-HE 1849 chr3L 11864535 11864582 chr3L 11865856 11865903 pogo 18 1321 0.0 8.0 4.0 3.6 1368 chr3L 11864535 intron CG44837 - chr3L 11865219 intron CG44837 - chr3L 11865903 intron CG44837 - chr3L_18_11865001 chr3L_11865001 EF39_1-HE 1850 chr3L 11887233 11887268 chr3L 11887356 11887391 6 123 7.0 0.0 3.5 1.3 158 chr3L 11887233 intron CG44837 - chr3L 11887312 intron,3` UTR CG44837 -,CG5897 - chr3L 11887391 intron,3` UTR CG44837 -,CG5897 - chr3L_6_11885001 chr3L_11885001 EF39_1-HE 1851 chr3L 11898960 11899016 chr3L 11899239 11899295 13 279 2.5 3.5 3.0 3.2 335 chr3L 11898960 intron,intron CG44837 -,CR43624 + chr3L 11899128 intron,intron CG44837 -,CR43624 + chr3L 11899295 intron,intron CG44837 -,CR43624 + chr3L_13_11895001 chr3L_11895001 EF39_1-HE 1852 chr3L 11901635 11901689 chr3L 11901752 11901806 24 115 2.5 6.5 4.5 4.4 171 chr3L 11901635 intron CG44837 - chr3L 11901720 intron CG44837 - chr3L 11901806 intron CG44837 - chr3L_24_11900001 chr3L_11900001 EF39_1-HE 1853 chr3L 11943478 11943517 chr3L 11943605 11943644 8 127 1.0 0.5 0.8 4.4 166 chr3L 11943478 3` UTR Rpt4R + chr3L 11943561 intergenic Rpt4R +,CG5883 - chr3L 11943644 3` UTR CG5883 - chr3L_8_11940001 chr3L_11940001 EF39_1-HE 1854 chr3L 12013893 12013937 chr3L 12014010 12014054 4 117 2.0 4.0 3.0 1.0 161 chr3L 12013893 intron rols - chr3L 12013974 intron rols - chr3L 12014054 intron rols - chr3L_4_12010001 chr3L_12010001 EF39_1-HE 1855 chr3L 12052682 12052726 chr3L 12052797 12052841 11 115 3.5 4.5 4.0 2.2 159 chr3L 12052682 intron rols - chr3L 12052762 intron rols - chr3L 12052841 intron rols - chr3L_11_12050001 chr3L_12050001 EF39_1-HE 1856 chr3L 12084487 12084525 chr3L 12084599 12084638 9 111 1.5 4.0 2.8 2.4 151 chr3L 12084487 intergenic not near genes chr3L 12084562 intergenic not near genes chr3L 12084638 intergenic not near genes chr3L_9_12080001 chr3L_12080001 EF39_1-HE 1857 chr3L 12092379 12092421 chr3L 12092482 12092528 6 104 1.5 1.5 1.5 2.4 149 chr3L 12092379 intergenic not near genes chr3L 12092454 intergenic not near genes chr3L 12092528 intergenic not near genes chr3L_6_12090001 chr3L_12090001 EF39_1-HE 1858 chr3L 12094318 12094366 chr3L 12094430 12094474 5 109 1.5 0.0 0.8 2.8 156 chr3L 12094318 intergenic not near genes chr3L 12094396 intergenic not near genes chr3L 12094474 intergenic not near genes chr3L_5_12090001 chr3L_12090001 EF39_1-HE 1859 chr3L 12170754 12170783 chr3L 12170876 12170905 11 122 3.0 3.5 3.2 2.6 151 chr3L 12170754 intron Rh7 - chr3L 12170830 intron Rh7 - chr3L 12170905 intron Rh7 - chr3L_11_12170001 chr3L_12170001 EF39_1-HE 1860 chr3L 12229935 12229978 chr3L 12230072 12230107 19 137 5.0 0.5 2.8 5.0 172 chr3L 12229935 intron app - chr3L 12230021 intron app - chr3L 12230107 intron app - chr3L_19_12230001 chr3L_12230001 EF39_1-HE 1861 chr3L 12235579 12235603 chr3L 12235694 12235718 14 115 7.5 9.0 8.2 1.5 139 chr3L 12235579 intron app - chr3L 12235648 intron app - chr3L 12235718 intron app - chr3L_14_12235001 chr3L_12235001 EF39_1-HE 1862 chr3L 12283524 12283581 chr3L 12283630 12283683 8 106 0.5 2.0 1.2 3.6 159 chr3L 12283524 intergenic not near genes chr3L 12283604 intergenic not near genes chr3L 12283683 intergenic not near genes chr3L_8_12280001 chr3L_12280001 EF39_1-HE 1863 chr3L 12295448 12295497 chr3L 12295597 12295654 7 155 2.5 2.5 2.5 2.0 206 chr3L 12295448 intron CG4328 - chr3L 12295551 intron CG4328 - chr3L 12295654 intron CG4328 - chr3L_7_12295001 chr3L_12295001 EF39_1-HE 1864 chr3L 12312487 12312507 chr3L 12312580 12312611 11 103 5.5 7.5 6.5 1.5 124 chr3L 12312487 intergenic not near genes chr3L 12312549 intergenic not near genes chr3L 12312611 intergenic not near genes chr3L_11_12310001 chr3L_12310001 EF39_1-HE 1865 chr3L 12314000 12314021 chr3L 12314106 12314126 12 106 2.5 8.0 5.2 1.9 126 chr3L 12314000 intergenic not near genes chr3L 12314063 intergenic not near genes chr3L 12314126 intergenic not near genes chr3L_12_12310001 chr3L_12310001 EF39_1-HE 1866 chr3L 12335359 12335407 chr3L 12335464 12335512 11 104 8.0 2.5 5.2 1.8 153 chr3L 12335359 exon CG32105 + chr3L 12335436 3` UTR CG32105 + chr3L 12335512 3` UTR CG32105 + chr3L_11_12335001 chr3L_12335001 EF39_1-HE 1867 chr3L 12342655 12342706 chr3L 12342772 12342823 14 117 3.0 3.0 3.0 3.5 168 chr3L 12342655 intron CrzR - chr3L 12342739 intron CrzR - chr3L 12342823 intron CrzR - chr3L_14_12340001 chr3L_12340001 EF39_1-HE 1868 chr3L 12369510 12369567 chr3L 12369626 12369683 8 116 1.5 6.5 4.0 1.6 173 chr3L 12369510 intron Ncc69 - chr3L 12369596 intron Ncc69 - chr3L 12369683 intron Ncc69 - chr3L_8_12365001 chr3L_12365001 EF39_1-HE 1869 chr3L 12526992 12527015 chr3L 12527216 12527239 4 224 4.0 1.0 2.5 1.1 247 chr3L 12526992 intergenic nst -,eIF-2beta - chr3L 12527116 intergenic nst -,eIF-2beta - chr3L 12527239 3` UTR nst - chr3L_4_12525001 chr3L_12525001 EF39_1-HE 1870 chr3L 12605706 12605741 chr3L 12605811 12605847 8 106 6.0 5.5 5.8 1.2 141 chr3L 12605706 intergenic not near genes chr3L 12605776 intergenic not near genes chr3L 12605847 intergenic not near genes chr3L_8_12605001 chr3L_12605001 EF39_1-HE 1871 chr3L 12613722 12613742 chr3L 12613851 12613871 9 129 10.0 5.0 7.5 1.1 149 chr3L 12613722 intron caup + chr3L 12613796 intron caup + chr3L 12613871 intron caup + chr3L_9_12610001 chr3L_12610001 EF39_1-HE 1872 chr3L 12647923 12647963 chr3L 12648025 12648065 9 102 5.5 2.0 3.8 1.9 142 chr3L 12647923 5` UTR CR32111 + chr3L 12647994 5` UTR CR32111 + chr3L 12648065 5` UTR CR32111 + chr3L_9_12645001 chr3L_12645001 EF39_1-HE 1873 chr3L 12677148 12677173 chr3L 12677253 12677278 7 105 12.0 0.5 6.2 1.0 130 chr3L 12677148 intergenic not near genes chr3L 12677213 intergenic not near genes chr3L 12677278 intergenic not near genes chr3L_7_12675001 chr3L_12675001 EF39_1-HE 1874 chr3L 12728009 12728041 chr3L 12728119 12728151 7 110 1.5 0.5 1.0 3.5 142 chr3L 12728009 intergenic not near genes chr3L 12728080 intergenic not near genes chr3L 12728151 intergenic not near genes chr3L_7_12725001 chr3L_12725001 EF39_1-HE 1875 chr3L 12801956 12801996 chr3L 12802058 12802098 11 102 3.0 3.5 3.2 2.6 142 chr3L 12801956 intron Atg1 - chr3L 12802027 intron Atg1 - chr3L 12802098 intron Atg1 - chr3L_11_12800001 chr3L_12800001 EF39_1-HE 1876 chr3L 12854309 12854366 chr3L 12854412 12854469 28 103 0.5 4.0 2.2 8.8 160 chr3L 12854309 intron Ent3 + chr3L 12854389 intron Ent3 + chr3L 12854469 exon Ent3 + chr3L_28_12850001 chr3L_12850001 EF39_1-HE 1877 chr3L 12870307 12870351 chr3L 12870428 12870472 6 121 2.5 5.0 3.8 1.2 165 chr3L 12870307 intergenic not near genes chr3L 12870390 intergenic not near genes chr3L 12870472 intergenic not near genes chr3L_6_12870001 chr3L_12870001 EF39_1-HE 1878 chr3L 12874914 12874951 chr3L 12877232 12877269 jockey 11 2318 2.5 5.0 3.8 2.3 2355 chr3L 12874914 intergenic not near genes chr3L 12876092 intergenic not near genes chr3L 12877269 intergenic not near genes chr3L_11_12875001 chr3L_12875001 EF39_1-HE 1879 chr3L 12894780 12894808 chr3L 12894884 12894912 5 104 6.0 4.0 5.0 0.8 132 chr3L 12894780 intergenic CG14118 + chr3L 12894846 intergenic CG14118 + chr3L 12894912 intergenic CG14118 + chr3L_5_12890001 chr3L_12890001 EF39_1-HE 1880 chr3L 12908836 12908885 chr3L 12908941 12908987 14 102 5.5 6.0 5.8 2.1 151 chr3L 12908836 intergenic not near genes chr3L 12908912 intergenic not near genes chr3L 12908987 intergenic not near genes chr3L_14_12905001 chr3L_12905001 EF39_1-HE 1881 chr3L 12919251 12919278 chr3L 12924750 12924777 Rt1c 7 5499 9.0 4.5 6.8 0.9 5526 chr3L 12919251 intergenic not near genes chr3L 12922014 intergenic not near genes chr3L 12924777 intergenic not near genes chr3L_7_12920001 chr3L_12920001 EF39_1-HE 1882 chr3L 12943819 12943870 chr3L 12943925 12943976 13 106 4.5 0.0 2.2 4.1 157 chr3L 12943819 intergenic not near genes chr3L 12943898 intergenic not near genes chr3L 12943976 intergenic not near genes chr3L_13_12940001 chr3L_12940001 EF39_1-HE 1883 chr3L 12957761 12957815 chr3L 12962269 12962323 copia 6 4508 2.5 3.0 2.8 1.6 4562 chr3L 12957761 intergenic not near genes chr3L 12960042 intergenic not near genes chr3L 12962323 intergenic not near genes chr3L_6_12960001 chr3L_12960001 EF39_1-HE 1884 chr3L 12979542 12979595 chr3L 12979654 12979707 12 112 2.5 0.0 1.2 5.5 165 chr3L 12979542 intergenic not near genes chr3L 12979624 intergenic not near genes chr3L 12979707 intergenic not near genes chr3L_12_12975001 chr3L_12975001 EF39_1-HE 1885 chr3L 13002239 13002276 chr3L 13002359 13002414 7 135 2.0 4.0 3.0 1.8 175 chr3L 13002239 intergenic not near genes chr3L 13002326 intergenic not near genes chr3L 13002414 intergenic not near genes chr3L_7_13000001 chr3L_13000001 EF39_1-HE 1886 chr3L 13050540 13050587 chr3L 13050645 13050692 7 105 3.5 2.0 2.8 1.8 152 chr3L 13050540 intergenic not near genes chr3L 13050616 intergenic not near genes chr3L 13050692 intergenic not near genes chr3L_7_13050001 chr3L_13050001 EF39_1-HE 1887 chr3L 13056693 13056733 chr3L 13056804 13056844 10 111 0.5 4.5 2.5 2.9 151 chr3L 13056693 intergenic not near genes chr3L 13056768 intergenic not near genes chr3L 13056844 intergenic not near genes chr3L_10_13055001 chr3L_13055001 EF39_1-HE 1888 chr3L 13112530 13112556 chr3L 13112655 13112681 6 125 9.0 1.0 5.0 1.0 151 chr3L 13112530 intergenic not near genes chr3L 13112606 intergenic not near genes chr3L 13112681 intergenic not near genes chr3L_6_13110001 chr3L_13110001 EF39_1-HE 1889 chr3L 13144110 13144144 chr3L 13144213 13144247 6 103 1.0 2.5 1.8 2.1 137 chr3L 13144110 intergenic not near genes chr3L 13144178 intergenic not near genes chr3L 13144247 intergenic not near genes chr3L_6_13140001 chr3L_13140001 EF39_1-HE 1890 chr3L 13159267 13159296 chr3L 13159372 13159401 7 105 7.0 7.0 7.0 0.9 134 chr3L 13159267 intergenic not near genes chr3L 13159334 intergenic not near genes chr3L 13159401 intergenic not near genes chr3L_7_13155001 chr3L_13155001 EF39_1-HE 1891 chr3L 13166159 13166297 chr3L 13166267 13166403 15 106 0.0 0.0 0.0 15.0 244 chr3L 13166159 intergenic not near genes chr3L 13166281 intergenic not near genes chr3L 13166403 intergenic not near genes chr3L_15_13165001 chr3L_13165001 EF39_1-HE 1892 chr3L 13201767 13201775 chr3L 13201892 13201900 5 125 1.0 4.0 2.5 1.4 133 chr3L 13201767 intergenic not near genes chr3L 13201834 intergenic not near genes chr3L 13201900 intergenic not near genes chr3L_5_13200001 chr3L_13200001 EF39_1-HE 1893 chr3L 13214683 13214704 chr3L 13214787 13214802 8 103 9.0 1.5 5.2 1.3 119 chr3L 13214683 intergenic not near genes chr3L 13214742 intergenic not near genes chr3L 13214802 intergenic CR45097 - chr3L_8_13210001 chr3L_13210001 EF39_1-HE 1894 chr3L 13241157 13241184 chr3L 13241269 13241297 5 111 5.0 3.5 4.2 1.0 140 chr3L 13241157 intron caps + chr3L 13241227 intron caps + chr3L 13241297 intron caps + chr3L_5_13240001 chr3L_13240001 EF39_1-HE 1895 chr3L 13267260 13267299 chr3L 13267399 13267438 11 139 7.0 1.5 4.2 2.1 178 chr3L 13267260 intron caps + chr3L 13267349 intron caps + chr3L 13267438 intron caps + chr3L_11_13265001 chr3L_13265001 EF39_1-HE 1896 chr3L 13280279 13280328 chr3L 13280409 13280458 15 130 2.5 3.0 2.8 3.9 179 chr3L 13280279 intergenic not near genes chr3L 13280368 intergenic not near genes chr3L 13280458 intergenic not near genes chr3L_15_13280001 chr3L_13280001 EF39_1-HE 1897 chr3L 13296493 13296544 chr3L 13296610 13296661 22 117 5.0 2.0 3.5 4.9 168 chr3L 13296493 intergenic Sfp70A4 - chr3L 13296577 3` UTR Sfp70A4 - chr3L 13296661 3` UTR Sfp70A4 - chr3L_22_13295001 chr3L_13295001 EF39_1-HE 1898 chr3L 13299365 13299392 chr3L 13299482 13299509 8 117 3.0 3.0 3.0 2.0 144 chr3L 13299365 intergenic CG42481 -,CG43147 - chr3L 13299437 intergenic CG43147 -,CG42481 - chr3L 13299509 intergenic CG43147 -,CG42481 - chr3L_8_13295001 chr3L_13295001 EF39_1-HE 1899 chr3L 13315833 13315865 chr3L 13315946 13315976 5 110 3.5 2.5 3.0 1.2 143 chr3L 13315833 intergenic not near genes chr3L 13315904 intergenic not near genes chr3L 13315976 intergenic not near genes chr3L_5_13315001 chr3L_13315001 EF39_1-HE 1900 chr3L 13338600 13338648 chr3L 13338703 13338751 13 103 6.5 1.5 4.0 2.6 151 chr3L 13338600 intergenic not near genes chr3L 13338676 intergenic not near genes chr3L 13338751 intergenic not near genes chr3L_13_13335001 chr3L_13335001 EF39_1-HE 1901 chr3L 13374233 13374263 chr3L 13374348 13374378 5 115 4.5 2.0 3.2 1.2 145 chr3L 13374233 intergenic not near genes chr3L 13374306 intergenic not near genes chr3L 13374378 intergenic not near genes chr3L_5_13370001 chr3L_13370001 EF39_1-HE 1902 chr3L 13375387 13375445 chr3L 13375523 13375581 10 136 1.0 4.0 2.5 2.9 194 chr3L 13375387 intergenic not near genes chr3L 13375484 intergenic not near genes chr3L 13375581 intergenic not near genes chr3L_10_13375001 chr3L_13375001 EF39_1-HE 1903 chr3L 13475398 13475435 chr3L 13475514 13475551 14 116 4.5 3.0 3.8 2.9 153 chr3L 13475398 intergenic not near genes chr3L 13475474 intergenic not near genes chr3L 13475551 intergenic not near genes chr3L_14_13475001 chr3L_13475001 EF39_1-HE 1904 chr3L 13489891 13489897 chr3L 13489995 13490003 4 106 9.5 9.0 9.2 0.4 112 chr3L 13489891 intron Tgi + chr3L 13489947 intron Tgi + chr3L 13490003 intron Tgi + chr3L_4_13485001 chr3L_13485001 EF39_1-HE 1905 chr3L 13489900 13489912 chr3L 13489992 13490018 7 102 6.5 8.0 7.2 0.9 118 chr3L 13489900 intron Tgi + chr3L 13489959 intron Tgi + chr3L 13490018 intron Tgi + chr3L_7_13485001 chr3L_13485001 EF39_1-HE 1906 chr3L 13491780 13491815 chr3L 13491894 13491929 10 114 3.0 4.5 3.8 2.1 149 chr3L 13491780 intron Tgi + chr3L 13491854 intron Tgi + chr3L 13491929 intron Tgi + chr3L_10_13490001 chr3L_13490001 EF39_1-HE 1907 chr3L 13525141 13525185 chr3L 13532963 13533007 roo 18 7821 4.5 4.5 4.5 3.3 7866 chr3L 13525141 intergenic not near genes chr3L 13529074 intergenic not near genes chr3L 13533007 intergenic not near genes chr3L_18_13525001 chr3L_13525001 EF39_1-HE 1908 chr3L 13574606 13574619 chr3L 13580143 13580156 Rt1c 5 5537 7.5 8.5 8.0 0.6 5550 chr3L 13574606 intron bru-3 - chr3L 13577381 intron bru-3 - chr3L 13580156 intron bru-3 - chr3L_5_13575001 chr3L_13575001 EF39_1-HE 1909 chr3L 13582194 13582234 chr3L 13582310 13582318 11 114 5.0 8.0 6.5 1.5 124 chr3L 13582194 intron bru-3 - chr3L 13582256 intron bru-3 - chr3L 13582318 intron bru-3 - chr3L_11_13580001 chr3L_13580001 EF39_1-HE 1910 chr3L 13629503 13629542 chr3L 13629638 13629677 14 135 4.5 8.0 6.2 1.9 174 chr3L 13629503 intron bru-3 - chr3L 13629590 intron bru-3 - chr3L 13629677 intron bru-3 - chr3L_14_13625001 chr3L_13625001 EF39_1-HE 1911 chr3L 13745265 13745286 chr3L 13745380 13745401 9 115 6.5 0.0 3.2 2.1 136 chr3L 13745265 intron bru-3 - chr3L 13745333 intron bru-3 - chr3L 13745401 intron bru-3 - chr3L_9_13745001 chr3L_13745001 EF39_1-HE 1912 chr3L 13763674 13763706 chr3L 13763782 13763814 13 108 2.0 5.5 3.8 2.7 140 chr3L 13763674 intron bru-3 - chr3L 13763744 intron bru-3 - chr3L 13763814 intron bru-3 - chr3L_13_13760001 chr3L_13760001 EF39_1-HE 1913 chr3L 13804526 13804572 chr3L 13822833 13822884 roo 20 18311 8.0 8.0 8.0 2.2 18358 chr3L 13804526 intergenic not near genes chr3L 13813705 intergenic not near genes chr3L 13822884 intergenic not near genes chr3L_20_13810001 chr3L_13810001 EF39_1-HE 1914 chr3L 13828690 13828718 chr3L 13828792 13828820 13 102 6.0 9.5 7.8 1.5 130 chr3L 13828690 intergenic not near genes chr3L 13828755 intergenic not near genes chr3L 13828820 intergenic not near genes chr3L_13_13825001 chr3L_13825001 EF39_1-HE 1915 chr3L 13884353 13884386 chr3L 13884470 13884503 12 115 12.0 3.5 7.8 1.4 150 chr3L 13884353 intron dysc - chr3L 13884428 intron dysc - chr3L 13884503 intron dysc - chr3L_12_13880001 chr3L_13880001 EF39_1-HE 1916 chr3L 13910235 13910291 chr3L 13910346 13910402 17 111 4.0 4.0 4.0 3.4 167 chr3L 13910235 intron Rgl - chr3L 13910318 intron Rgl - chr3L 13910402 intron Rgl - chr3L_17_13910001 chr3L_13910001 EF39_1-HE 1917 chr3L 13911759 13911815 chr3L 13911882 13911938 13 123 2.5 2.5 2.5 3.7 179 chr3L 13911759 intron Rgl - chr3L 13911848 intron Rgl - chr3L 13911938 intron Rgl - chr3L_13_13910001 chr3L_13910001 EF39_1-HE 1918 chr3L 13920401 13920415 chr3L 13920504 13920518 5 103 0.0 4.5 2.2 1.6 117 chr3L 13920401 intron Rgl - chr3L 13920460 intron Rgl - chr3L 13920518 intron Rgl - chr3L_5_13920001 chr3L_13920001 EF39_1-HE 1919 chr3L 13991786 13991815 chr3L 13991890 13991921 7 104 4.0 6.0 5.0 1.2 135 chr3L 13991786 intron CG17364 - chr3L 13991854 intron CG17364 - chr3L 13991921 intron CG17364 - chr3L_7_13990001 chr3L_13990001 EF39_1-HE 1920 chr3L 13993985 13993992 chr3L 13994091 13994098 5 106 2.5 1.0 1.8 1.8 113 chr3L 13993985 intergenic 26-29-p + chr3L 13994042 intergenic 26-29-p + chr3L 13994098 intergenic 26-29-p + chr3L_5_13990001 chr3L_13990001 EF39_1-HE 1921 chr3L 14076065 14076104 chr3L 14076169 14076209 5 104 0.5 3.5 2.0 1.7 144 chr3L 14076065 3` UTR,intron Pex1 +,btl + chr3L 14076137 intron btl + chr3L 14076209 intron btl + chr3L_5_14075001 chr3L_14075001 EF39_1-HE 1922 chr3L 14102599 14102642 chr3L 14102709 14102754 9 111 0.5 4.5 2.5 2.6 155 chr3L 14102599 intergenic not near genes chr3L 14102676 intergenic not near genes chr3L 14102754 intergenic not near genes chr3L_9_14100001 chr3L_14100001 EF39_1-HE 1923 chr3L 14129472 14129509 chr3L 14129567 14129617 20 105 6.5 2.5 4.5 3.6 145 chr3L 14129472 intron Sox21b - chr3L 14129544 intron Sox21b - chr3L 14129617 intron Sox21b - chr3L_20_14125001 chr3L_14125001 EF39_1-HE 1924 chr3L 14148513 14148555 chr3L 14148623 14148664 17 109 2.0 7.5 4.8 2.9 151 chr3L 14148513 intergenic not near genes chr3L 14148588 intergenic not near genes chr3L 14148664 intergenic not near genes chr3L_17_14145001 chr3L_14145001 EF39_1-HE 1925 chr3L 14158013 14158039 chr3L 14158124 14158150 10 111 8.0 8.5 8.2 1.1 137 chr3L 14158013 intergenic not near genes chr3L 14158082 intergenic not near genes chr3L 14158150 intergenic not near genes chr3L_10_14155001 chr3L_14155001 EF39_1-HE 1926 chr3L 14158048 14158059 chr3L 14158159 14158170 6 111 4.5 14.5 9.5 0.6 122 chr3L 14158048 intergenic not near genes chr3L 14158109 intergenic not near genes chr3L 14158170 intergenic not near genes chr3L_6_14155001 chr3L_14155001 EF39_1-HE 1927 chr3L 14159428 14159450 chr3L 14159531 14159553 8 103 5.0 11.0 8.0 0.9 125 chr3L 14159428 intergenic not near genes chr3L 14159490 intergenic not near genes chr3L 14159553 intergenic not near genes chr3L_8_14155001 chr3L_14155001 EF39_1-HE 1928 chr3L 14180709 14180758 chr3L 14180811 14180856 15 102 3.5 4.0 3.8 3.1 147 chr3L 14180709 intergenic not near genes chr3L 14180782 intergenic not near genes chr3L 14180856 intergenic not near genes chr3L_15_14180001 chr3L_14180001 EF39_1-HE 1929 chr3L 14195276 14195292 chr3L 14195387 14195403 6 111 4.0 13.5 8.8 0.6 127 chr3L 14195276 intron nuf + chr3L 14195340 intron nuf + chr3L 14195403 intron nuf + chr3L_6_14195001 chr3L_14195001 EF39_1-HE 1930 chr3L 14211418 14211460 chr3L 14211522 14211564 16 104 4.0 5.0 4.5 2.9 146 chr3L 14211418 intron nuf + chr3L 14211491 intron nuf + chr3L 14211564 intron nuf + chr3L_16_14210001 chr3L_14210001 EF39_1-HE 1931 chr3L 14214239 14214271 chr3L 14214345 14214377 9 106 4.0 3.5 3.8 1.9 138 chr3L 14214239 intron nuf + chr3L 14214308 intron nuf + chr3L 14214377 intron nuf + chr3L_9_14210001 chr3L_14210001 EF39_1-HE 1932 chr3L 14245544 14245594 chr3L 14245664 14245714 1360 17 119 4.0 2.0 3.0 4.2 170 chr3L 14245544 3` UTR CR44561 - chr3L 14245629 3` UTR CR44561 - chr3L 14245714 intergenic CR44561 -,CR44560 + chr3L_17_14245001 chr3L_14245001 EF39_1-HE 1933 chr3L 14267356 14267387 chr3L 14271822 14271853 F-element 9 4466 4.0 3.5 3.8 1.9 4497 chr3L 14267356 intergenic not near genes chr3L 14269604 intergenic not near genes chr3L 14271853 intergenic not near genes chr3L_9_14265001 chr3L_14265001 EF39_1-HE 1934 chr3L 14287696 14287724 chr3L 14287809 14287837 8 113 1.5 9.0 5.2 1.3 141 chr3L 14287696 intron fz + chr3L 14287766 intron fz + chr3L 14287837 intron fz + chr3L_8_14285001 chr3L_14285001 EF39_1-HE 1935 chr3L 14295957 14296010 chr3L 14296469 14296522 roo 20 510 8.5 6.5 7.5 2.4 565 chr3L 14295957 intron fz + chr3L 14296240 intron fz + chr3L 14296522 intron fz + chr3L_20_14295001 chr3L_14295001 EF39_1-HE 1936 chr3L 14308020 14308071 chr3L 14308175 14308226 16 155 2.5 0.5 1.5 6.4 206 chr3L 14308020 intron fz + chr3L 14308123 intron fz + chr3L 14308226 intron fz + chr3L_16_14305001 chr3L_14305001 EF39_1-HE 1937 chr3L 14311998 14312053 chr3L 14316838 14316893 X-element 15 4840 4.0 10.0 7.0 1.9 4895 chr3L 14311998 exon fz + chr3L 14314446 intron fz + chr3L 14316893 intron fz + chr3L_15_14310001 chr3L_14310001 EF39_1-HE 1938 chr3L 14326678 14326708 chr3L 14326792 14326822 6 114 4.5 7.5 6.0 0.9 144 chr3L 14326678 intron fz + chr3L 14326750 intron fz + chr3L 14326822 intron fz + chr3L_6_14325001 chr3L_14325001 EF39_1-HE 1939 chr3L 14356495 14356514 chr3L 14356601 14356620 6 106 10.0 4.0 7.0 0.8 125 chr3L 14356495 intron fz + chr3L 14356558 intron fz + chr3L 14356620 intron fz + chr3L_6_14355001 chr3L_14355001 EF39_1-HE 1940 chr3L 14356516 14356550 chr3L 14356600 14356656 20 105 4.5 4.0 4.2 3.8 140 chr3L 14356516 intron fz + chr3L 14356586 intron fz + chr3L 14356656 intron fz + chr3L_20_14355001 chr3L_14355001 EF39_1-HE 1941 chr3L 14390120 14390155 chr3L 14390230 14390265 8 110 0.0 5.5 2.8 2.1 145 chr3L 14390120 intergenic not near genes chr3L 14390192 intergenic not near genes chr3L 14390265 intergenic not near genes chr3L_8_14390001 chr3L_14390001 EF39_1-HE 1942 chr3L 14427823 14427868 chr3L 14427976 14428021 13 153 4.5 6.5 5.5 2.0 198 chr3L 14427823 intron bbg - chr3L 14427922 intron bbg - chr3L 14428021 intron bbg - chr3L_13_14425001 chr3L_14425001 EF39_1-HE 1943 chr3L 14441565 14441617 chr3L 14441740 14441792 8 172 2.5 2.0 2.2 2.5 227 chr3L 14441565 intron bbg - chr3L 14441678 intron bbg - chr3L 14441792 intron bbg - chr3L_8_14440001 chr3L_14440001 EF39_1-HE 1944 chr3L 14468428 14468473 chr3L 14473660 14473705 copia 18 5232 5.5 7.0 6.2 2.5 5277 chr3L 14468428 intron bbg - chr3L 14471066 intron bbg - chr3L 14473705 intron bbg - chr3L_18_14470001 chr3L_14470001 EF39_1-HE 1945 chr3L 14473864 14473877 chr3L 14473967 14473980 5 103 11.0 5.0 8.0 0.6 116 chr3L 14473864 intron bbg - chr3L 14473922 intron bbg - chr3L 14473980 intron bbg - chr3L_5_14470001 chr3L_14470001 EF39_1-HE 1946 chr3L 14483946 14483991 chr3L 14484058 14484103 19 112 5.5 8.5 7.0 2.4 157 chr3L 14483946 intron bbg - chr3L 14484024 intron bbg - chr3L 14484103 intron bbg - chr3L_19_14480001 chr3L_14480001 EF39_1-HE 1947 chr3L 14485993 14486160 chr3L 14486108 14486263 25 108 0.0 0.0 0.0 25.0 270 chr3L 14485993 intron bbg - chr3L 14486128 intron bbg - chr3L 14486263 intron bbg - chr3L_25_14485001 chr3L_14485001 EF39_1-HE 1948 chr3L 14524296 14524353 chr3L 14529084 14529138 F-element 7 4787 1.5 1.0 1.2 3.2 4842 chr3L 14524296 intron bbg - chr3L 14526717 intron bbg - chr3L 14529138 intron bbg - chr3L_7_14525001 chr3L_14525001 EF39_1-HE 1949 chr3L 14531213 14531245 chr3L 14531352 14531384 5 139 1.0 3.5 2.2 1.6 171 chr3L 14531213 intron bbg - chr3L 14531298 intron bbg - chr3L 14531384 intron bbg - chr3L_5_14530001 chr3L_14530001 EF39_1-HE 1950 chr3L 14534736 14534754 chr3L 14534839 14534857 10 103 2.5 5.5 4.0 2.0 121 chr3L 14534736 intron bbg - chr3L 14534796 intron bbg - chr3L 14534857 intron bbg - chr3L_10_14530001 chr3L_14530001 EF39_1-HE 1951 chr3L 14546597 14546818 chr3L 14546704 14546925 15 107 2.0 5.0 3.5 3.3 328 chr3L 14546597 intron CG9238 - chr3L 14546761 intron CG9238 - chr3L 14546925 intron CG9238 - chr3L_15_14545001 chr3L_14545001 EF39_1-HE 1952 chr3L 14627186 14627218 chr3L 14627297 14627331 4 112 3.5 4.0 3.8 0.8 145 chr3L 14627186 intron CG9628 + chr3L 14627258 intron CG9628 + chr3L 14627331 intron CG9628 + chr3L_4_14625001 chr3L_14625001 EF39_1-HE 1953 chr3L 14646942 14646986 chr3L 14647045 14647090 11 103 2.5 4.5 3.5 2.4 148 chr3L 14646942 intron dlp + chr3L 14647016 intron dlp + chr3L 14647090 intron dlp + chr3L_11_14645001 chr3L_14645001 EF39_1-HE 1954 chr3L 14660141 14660181 chr3L 14660247 14660285 7 106 5.5 6.5 6.0 1.0 144 chr3L 14660141 intron dlp + chr3L 14660213 intron dlp + chr3L 14660285 intron dlp + chr3L_7_14660001 chr3L_14660001 EF39_1-HE 1955 chr3L 14684599 14684625 chr3L 14684717 14684743 5 118 1.5 3.5 2.5 1.4 144 chr3L 14684599 intron ome + chr3L 14684671 intron ome + chr3L 14684743 intron ome + chr3L_5_14680001 chr3L_14680001 EF39_1-HE 1956 chr3L 14695362 14695417 chr3L 14695483 14695538 22 121 2.0 1.0 1.5 8.8 176 chr3L 14695362 intron ome + chr3L 14695450 intron ome + chr3L 14695538 intron ome + chr3L_22_14695001 chr3L_14695001 EF39_1-HE 1957 chr3L 14721160 14721210 chr3L 14723029 14723079 Rt1c 23 1869 5.5 5.5 5.5 3.5 1919 chr3L 14721160 intron ome + chr3L 14722120 intron ome + chr3L 14723079 intron ome + chr3L_23_14720001 chr3L_14720001 EF39_1-HE 1958 chr3L 14725569 14725594 chr3L 14728590 14728615 Doc 9 3021 7.0 3.0 5.0 1.5 3046 chr3L 14725569 intron ome + chr3L 14727092 intron ome + chr3L 14728615 intron ome + chr3L_9_14725001 chr3L_14725001 EF39_1-HE 1959 chr3L 14782321 14782365 chr3L 14782497 14782541 12 176 2.0 9.0 5.5 1.8 220 chr3L 14782321 intron bmm - chr3L 14782431 intron bmm - chr3L 14782541 intron bmm - chr3L_12_14780001 chr3L_14780001 EF39_1-HE 1960 chr3L 14825135 14825156 chr3L 14832888 14832909 Stalker2 7 7753 1.0 12.0 6.5 0.9 7774 chr3L 14825135 intron CG17839 + chr3L 14829022 intron CG17839 + chr3L 14832909 intron CG17839 + chr3L_7_14825001 chr3L_14825001 EF39_1-HE 1961 chr3L 14839012 14839051 chr3L 14839127 14839166 14 115 5.5 5.0 5.2 2.3 154 chr3L 14839012 intron CG17839 + chr3L 14839089 intron CG17839 + chr3L 14839166 intron CG17839 + chr3L_14_14835001 chr3L_14835001 EF39_1-HE 1962 chr3L 14840335 14840381 chr3L 14840466 14840512 8 131 4.0 0.5 2.2 2.5 177 chr3L 14840335 intron CG17839 + chr3L 14840424 intron CG17839 + chr3L 14840512 intron CG17839 + chr3L_8_14840001 chr3L_14840001 EF39_1-HE 1963 chr3L 14865383 14865433 chr3L 14865505 14865555 16 122 5.5 6.5 6.0 2.3 172 chr3L 14865383 intron CG17839 + chr3L 14865469 intron CG17839 + chr3L 14865555 intron CG17839 + chr3L_16_14865001 chr3L_14865001 EF39_1-HE 1964 chr3L 14866801 14866831 chr3L 14866918 14866948 11 117 2.0 9.0 5.5 1.7 147 chr3L 14866801 exon CG17839 + chr3L 14866874 intron CG17839 + chr3L 14866948 intron CG17839 + chr3L_11_14865001 chr3L_14865001 EF39_1-HE 1965 chr3L 14867648 14867674 chr3L 14867754 14867780 9 106 0.5 6.0 3.2 2.1 132 chr3L 14867648 intron CG17839 + chr3L 14867714 intron CG17839 + chr3L 14867780 intron CG17839 + chr3L_9_14865001 chr3L_14865001 EF39_1-HE 1966 chr3L 14883276 14883529 chr3L 14883382 14883642 14 106 1.5 4.5 3.0 3.5 366 chr3L 14883276 intergenic not near genes chr3L 14883459 intergenic not near genes chr3L 14883642 intergenic not near genes chr3L_14_14880001 chr3L_14880001 EF39_1-HE 1967 chr3L 14954339 14954356 chr3L 14956034 14956051 transib2 5 1695 9.0 0.5 4.8 0.9 1712 chr3L 14954339 intergenic not near genes chr3L 14955195 intergenic not near genes chr3L 14956051 intergenic not near genes chr3L_5_14955001 chr3L_14955001 EF39_1-HE 1968 chr3L 14957979 14957991 chr3L 14958087 14958099 7 108 6.0 2.5 4.2 1.3 120 chr3L 14957979 intergenic not near genes chr3L 14958039 intergenic not near genes chr3L 14958099 intergenic not near genes chr3L_7_14955001 chr3L_14955001 EF39_1-HE 1969 chr3L 14959962 14960015 chr3L 14960072 14960125 25 110 3.5 2.0 2.8 6.6 163 chr3L 14959962 intergenic not near genes chr3L 14960044 intergenic not near genes chr3L 14960125 intergenic not near genes chr3L_25_14960001 chr3L_14960001 EF39_1-HE 1970 chr3L 14966884 14966926 chr3L 14966990 14967033 8 106 0.5 3.5 2.0 2.7 149 chr3L 14966884 intergenic not near genes chr3L 14966958 intergenic not near genes chr3L 14967033 intergenic not near genes chr3L_8_14965001 chr3L_14965001 EF39_1-HE 1971 chr3L 14970745 14970757 chr3L 14971083 14971095 F-element 5 338 3.0 3.0 3.0 1.2 350 chr3L 14970745 intergenic Tom + chr3L 14970920 intergenic not near genes chr3L 14971095 intergenic not near genes chr3L_5_14970001 chr3L_14970001 EF39_1-HE 1972 chr3L 15044552 15044602 chr3L 15044657 15044708 9 105 4.0 2.0 3.0 2.2 156 chr3L 15044552 intron Sytbeta - chr3L 15044630 intron Sytbeta - chr3L 15044708 intron Sytbeta - chr3L_9_15040001 chr3L_15040001 EF39_1-HE 1973 chr3L 15063236 15063278 chr3L 15063349 15063390 13 113 2.5 3.5 3.0 3.2 154 chr3L 15063236 intron Sytbeta - chr3L 15063313 intron Sytbeta - chr3L 15063390 intron Sytbeta - chr3L_13_15060001 chr3L_15060001 EF39_1-HE 1974 chr3L 15085023 15085076 chr3L 15086215 15086268 1360 9 1192 1.5 3.0 2.2 2.8 1245 chr3L 15085023 intron cp309 - chr3L 15085646 intron cp309 - chr3L 15086268 intron cp309 - chr3L_9_15085001 chr3L_15085001 EF39_1-HE 1975 chr3L 15147506 15147555 chr3L 15147609 15147658 17 102 3.5 3.0 3.2 4.0 152 chr3L 15147506 intron FucTA + chr3L 15147582 intron FucTA + chr3L 15147658 intron FucTA + chr3L_17_15145001 chr3L_15145001 EF39_1-HE 1976 chr3L 15161470 15161521 chr3L 15161623 15161674 8 153 3.0 2.5 2.8 2.1 204 chr3L 15161470 intron CG7011 - chr3L 15161572 intron CG7011 - chr3L 15161674 intron CG7011 - chr3L_8_15160001 chr3L_15160001 EF39_1-HE 1977 chr3L 15179532 15179588 chr3L 15179634 15179690 16 100 3.0 2.5 2.8 4.2 158 chr3L 15179532 intergenic not near genes chr3L 15179611 intergenic not near genes chr3L 15179690 intergenic not near genes chr3L_16_15175001 chr3L_15175001 EF39_1-HE 1978 chr3L 15257417 15257449 chr3L 15257656 15257688 4 239 1.0 1.5 1.2 1.8 271 chr3L 15257417 intergenic not near genes chr3L 15257552 intergenic not near genes chr3L 15257688 intergenic not near genes chr3L_4_15255001 chr3L_15255001 EF39_1-HE 1979 chr3L 15284547 15284590 chr3L 15284652 15284695 11 105 8.0 7.0 7.5 1.3 148 chr3L 15284547 intergenic not near genes chr3L 15284621 intergenic not near genes chr3L 15284695 intergenic not near genes chr3L_11_15280001 chr3L_15280001 EF39_1-HE 1980 chr3L 15294719 15294772 chr3L 15295097 15295150 14 378 4.5 2.5 3.5 3.1 431 chr3L 15294719 intergenic not near genes chr3L 15294934 intergenic not near genes chr3L 15295150 intergenic not near genes chr3L_14_15290001 chr3L_15290001 EF39_1-HE 1981 chr3L 15295745 15295754 chr3L 15298614 15298623 gypsy5 5 2869 14.0 5.0 9.5 0.5 2878 chr3L 15295745 intergenic not near genes chr3L 15297184 intergenic not near genes chr3L 15298623 intergenic Best4 + chr3L_5_15295001 chr3L_15295001 EF39_1-HE 1982 chr3L 15295765 15295800 chr3L 15298634 15298668 gypsy5 5 2869 5.5 6.0 5.8 0.7 2903 chr3L 15295765 intergenic not near genes chr3L 15297216 intergenic not near genes chr3L 15298668 intergenic Best4 + chr3L_5_15295001 chr3L_15295001 EF39_1-HE 1983 chr3L 15314117 15314172 chr3L 15314369 15314424 11 251 2.5 3.0 2.8 2.9 307 chr3L 15314117 intergenic not near genes chr3L 15314270 intergenic not near genes chr3L 15314424 intergenic not near genes chr3L_11_15310001 chr3L_15310001 EF39_1-HE 1984 chr3L 15321976 15322018 chr3L 15322120 15322162 19 144 4.5 4.5 4.5 3.5 186 chr3L 15321976 intergenic not near genes chr3L 15322069 intergenic not near genes chr3L 15322162 intergenic not near genes chr3L_19_15320001 chr3L_15320001 EF39_1-HE 1985 chr3L 15333114 15333168 chr3L 15333220 15333276 15 104 2.5 3.0 2.8 3.9 162 chr3L 15333114 intergenic CR43247 + chr3L 15333195 intergenic CR43247 + chr3L 15333276 intergenic CR43247 + chr3L_15_15330001 chr3L_15330001 EF39_1-HE 1986 chr3L 15406004 15406040 chr3L 15406110 15406149 8 108 3.5 6.0 4.8 1.4 145 chr3L 15406004 intergenic not near genes chr3L 15406076 intergenic not near genes chr3L 15406149 intergenic not near genes chr3L_8_15405001 chr3L_15405001 EF39_1-HE 1987 chr3L 15423739 15423783 chr3L 15426609 15426653 opus 13 2870 5.0 6.5 5.8 1.9 2914 chr3L 15423739 intergenic not near genes chr3L 15425196 intergenic not near genes chr3L 15426653 intergenic not near genes chr3L_13_15425001 chr3L_15425001 EF39_1-HE 1988 chr3L 15427798 15427837 chr3L 15427902 15427941 11 104 5.5 4.5 5.0 1.8 143 chr3L 15427798 intergenic not near genes chr3L 15427870 intergenic not near genes chr3L 15427941 intergenic not near genes chr3L_11_15425001 chr3L_15425001 EF39_1-HE 1989 chr3L 15482292 15482344 chr3L 15482420 15482472 9 128 4.5 2.5 3.5 2.0 180 chr3L 15482292 intergenic not near genes chr3L 15482382 intergenic not near genes chr3L 15482472 intergenic not near genes chr3L_9_15480001 chr3L_15480001 EF39_1-HE 1990 chr3L 15491642 15491695 chr3L 15491751 15491804 15 109 3.0 4.5 3.8 3.1 162 chr3L 15491642 intergenic not near genes chr3L 15491723 intergenic not near genes chr3L 15491804 intergenic not near genes chr3L_15_15490001 chr3L_15490001 EF39_1-HE 1991 chr3L 15541593 15541634 chr3L 15541710 15541751 9 117 5.0 0.0 2.5 2.6 158 chr3L 15541593 intron CrebA + chr3L 15541672 intron CrebA + chr3L 15541751 intron CrebA + chr3L_9_15540001 chr3L_15540001 EF39_1-HE 1992 chr3L 15544260 15544290 chr3L 15544386 15544416 10 126 5.5 6.0 5.8 1.5 156 chr3L 15544260 intron CrebA + chr3L 15544338 intron CrebA + chr3L 15544416 intron CrebA + chr3L_10_15540001 chr3L_15540001 EF39_1-HE 1993 chr3L 15554912 15554952 chr3L 15556725 15556765 S-element 14 1813 2.0 5.5 3.8 2.9 1853 chr3L 15554912 intron AGO2 + chr3L 15555838 intron AGO2 + chr3L 15556765 intron AGO2 + chr3L_14_15555001 chr3L_15555001 EF39_1-HE 1994 chr3L 15581390 15581428 chr3L 15581508 15581546 11 118 2.5 2.5 2.5 3.1 156 chr3L 15581390 exon CG12301 + chr3L 15581468 exon CG12301 + chr3L 15581546 exon CG12301 + chr3L_11_15580001 chr3L_15580001 EF39_1-HE 1995 chr3L 15586751 15586799 chr3L 15586875 15586923 11 123 5.0 4.5 4.8 1.9 172 chr3L 15586751 intron CG7656 - chr3L 15586837 intron CG7656 - chr3L 15586923 intron CG7656 - chr3L_11_15585001 chr3L_15585001 EF39_1-HE 1996 chr3L 15590057 15590112 chr3L 15590160 15590215 14 103 3.5 3.0 3.2 3.3 158 chr3L 15590057 intron RhoGAP71E + chr3L 15590136 intron RhoGAP71E + chr3L 15590215 intron RhoGAP71E + chr3L_14_15590001 chr3L_15590001 EF39_1-HE 1997 chr3L 15594924 15594945 chr3L 15595030 15595051 7 106 4.0 5.5 4.8 1.2 127 chr3L 15594924 intron RhoGAP71E + chr3L 15594988 intron RhoGAP71E + chr3L 15595051 intron RhoGAP71E + chr3L_7_15590001 chr3L_15590001 EF39_1-HE 1998 chr3L 15600145 15600196 chr3L 15600255 15600323 11 125 2.0 0.0 1.0 5.5 178 chr3L 15600145 intron RhoGAP71E + chr3L 15600234 intron RhoGAP71E + chr3L 15600323 intron RhoGAP71E + chr3L_11_15600001 chr3L_15600001 EF39_1-HE 1999 chr3L 15628857 15628914 chr3L 15628982 15629039 17 125 4.5 0.5 2.5 4.9 182 chr3L 15628857 intron comm3 - chr3L 15628948 intron comm3 - chr3L 15629039 intron comm3 - chr3L_17_15625001 chr3L_15625001 EF39_1-HE 2000 chr3L 15650400 15650410 chr3L 15650511 15650521 4 111 6.5 0.0 3.2 1.0 121 chr3L 15650400 exon Eig71Eb + chr3L 15650460 3` UTR Eig71Eb + chr3L 15650521 3` UTR Eig71Eb + chr3L_4_15650001 chr3L_15650001 EF39_1-HE 2001 chr3L 15657060 15657087 chr3L 15657171 15657198 8 111 4.5 6.0 5.2 1.3 138 chr3L 15657060 intron Eig71Ef - chr3L 15657129 exon Eig71Ef - chr3L 15657198 exon Eig71Ef - chr3L_8_15655001 chr3L_15655001 EF39_1-HE 2002 chr3L 15658459 15658483 chr3L 15658598 15658622 5 139 0.0 1.5 0.8 2.8 163 chr3L 15658459 intergenic Eig71Eg +,Eig71Eh - chr3L 15658540 intergenic Eig71Eg +,Eig71Eh - chr3L 15658622 intergenic Eig71Eh -,Eig71Eg + chr3L_5_15655001 chr3L_15655001 EF39_1-HE 2003 chr3L 15670630 15670683 chr3L 15670800 15670853 14 170 4.0 5.0 4.5 2.5 223 chr3L 15670630 intergenic not near genes chr3L 15670742 intergenic not near genes chr3L 15670853 intergenic not near genes chr3L_14_15670001 chr3L_15670001 EF39_1-HE 2004 chr3L 15693798 15693814 chr3L 15693934 15693950 5 136 2.5 4.5 3.5 1.1 152 chr3L 15693798 intergenic not near genes chr3L 15693874 intergenic not near genes chr3L 15693950 intergenic not near genes chr3L_5_15690001 chr3L_15690001 EF39_1-HE 2005 chr3L 15840412 15840465 chr3L 15840526 15840576 5 112 3.0 6.5 4.8 0.9 164 chr3L 15840412 intron CG32150 - chr3L 15840494 intron CG32150 - chr3L 15840576 intron CG32150 - chr3L_5_15840001 chr3L_15840001 EF39_1-HE 2006 chr3L 15883168 15883224 chr3L 15883487 15883543 16 319 3.0 4.5 3.8 3.3 375 chr3L 15883168 intron pHCl - chr3L 15883356 intron pHCl - chr3L 15883543 intron pHCl - chr3L_16_15880001 chr3L_15880001 EF39_1-HE 2007 chr3L 15899214 15899231 chr3L 15899806 15899823 jockey 4 592 5.5 5.5 5.5 0.6 609 chr3L 15899214 intergenic pHCl - chr3L 15899518 intergenic pHCl - chr3L 15899823 intergenic sff - chr3L_4_15895001 chr3L_15895001 EF39_1-HE 2008 chr3L 15899243 15899253 chr3L 15899796 15899846 jockey 4 583 2.0 4.5 3.2 1.0 603 chr3L 15899243 intergenic pHCl - chr3L 15899544 intergenic not near genes chr3L 15899846 intergenic sff - chr3L_4_15895001 chr3L_15895001 EF39_1-HE 2009 chr3L 15916515 15916533 chr3L 15916618 15916636 7 103 6.0 5.0 5.5 1.1 121 chr3L 15916515 intron sff - chr3L 15916576 intron sff - chr3L 15916636 intron sff - chr3L_7_15915001 chr3L_15915001 EF39_1-HE 2010 chr3L 15929172 15929229 chr3L 15938345 15938402 roo 4 9173 2.0 1.0 1.5 1.6 9230 chr3L 15929172 intron Pka-C3 - chr3L 15933787 intron Pka-C3 - chr3L 15938402 intron Pka-C3 - chr3L_4_15930001 chr3L_15930001 EF39_1-HE 2011 chr3L 15946479 15946530 chr3L 15946591 15946642 8 112 4.0 0.0 2.0 2.7 163 chr3L 15946479 intron Pka-C3 - chr3L 15946560 intron Pka-C3 - chr3L 15946642 intron Pka-C3 - chr3L_8_15945001 chr3L_15945001 EF39_1-HE 2012 chr3L 16047726 16047746 chr3L 16047829 16047849 4 103 0.0 2.5 1.2 1.8 123 chr3L 16047726 intron th - chr3L 16047788 intron th - chr3L 16047849 intron th - chr3L_4_16045001 chr3L_16045001 EF39_1-HE 2013 chr3L 16149717 16149772 chr3L 16149839 16149894 14 117 4.5 6.5 5.5 2.2 177 chr3L 16149717 intron CG5151 - chr3L 16149806 intron CG5151 - chr3L 16149894 intron CG5151 - chr3L_14_16145001 chr3L_16145001 EF39_1-HE 2014 chr3L 16158781 16158836 chr3L 16158892 16158947 12 111 6.0 10.0 8.0 1.3 166 chr3L 16158781 intron CG5151 - chr3L 16158864 intron CG5151 - chr3L 16158947 intron CG5151 - chr3L_12_16155001 chr3L_16155001 EF39_1-HE 2015 chr3L 16184093 16184134 chr3L 16188930 16188979 X-element 13 4844 4.5 5.0 4.8 2.2 4886 chr3L 16184093 intergenic not near genes chr3L 16186536 intergenic not near genes chr3L 16188979 intergenic not near genes chr3L_13_16185001 chr3L_16185001 EF39_1-HE 2016 chr3L 16192333 16192356 chr3L 16192438 16192460 6 105 1.5 4.0 2.8 1.6 127 chr3L 16192333 intergenic not near genes chr3L 16192396 intergenic not near genes chr3L 16192460 intergenic not near genes chr3L_6_16190001 chr3L_16190001 EF39_1-HE 2017 chr3L 16212807 16212838 chr3L 16212924 16212955 15 116 4.5 5.5 5.0 2.5 148 chr3L 16212807 intergenic CG13073 - chr3L 16212881 intergenic CG13073 - chr3L 16212955 intergenic CG13073 - chr3L_15_16210001 chr3L_16210001 EF39_1-HE 2018 chr3L 16252052 16252105 chr3L 16252203 16252256 16 150 3.5 5.5 4.5 2.9 204 chr3L 16252052 5` UTR CG13055 - chr3L 16252154 5` UTR CG13055 - chr3L 16252256 5` UTR CG13055 - chr3L_16_16250001 chr3L_16250001 EF39_1-HE 2019 chr3L 16407610 16407650 chr3L 16407726 16407763 14 116 4.5 6.0 5.2 2.3 153 chr3L 16407610 intron fax - chr3L 16407686 intron fax - chr3L 16407763 intron fax - chr3L_14_16405001 chr3L_16405001 EF39_1-HE 2020 chr3L 16437764 16437789 chr3L 16437931 16437956 12 167 0.0 9.0 4.5 2.2 192 chr3L 16437764 intron,intron CG33158 +,dsx-c73A - chr3L 16437860 intron,intron CG33158 +,dsx-c73A - chr3L 16437956 intron,intron CG33158 +,dsx-c73A - chr3L_12_16435001 chr3L_16435001 EF39_1-HE 2021 chr3L 16443781 16443794 chr3L 16446513 16446526 Doc 9 2732 14.0 8.0 11.0 0.8 2745 chr3L 16443781 intron,intron CG33158 +,dsx-c73A - chr3L 16445154 intron,intron CG33158 +,dsx-c73A - chr3L 16446526 intron,intron CG33158 +,dsx-c73A - chr3L_9_16445001 chr3L_16445001 EF39_1-HE 2022 chr3L 16450014 16450052 chr3L 16450125 16450163 20 110 0.0 7.0 3.5 4.4 149 chr3L 16450014 intron,intron CG33158 +,dsx-c73A - chr3L 16450088 intron,intron CG33158 +,dsx-c73A - chr3L 16450163 intron,exon CG33158 +,dsx-c73A - chr3L_20_16450001 chr3L_16450001 EF39_1-HE 2023 chr3L 16457500 16457554 chr3L 16457624 16457675 10 122 1.0 5.0 3.0 2.5 175 chr3L 16457500 intron CG33158 + chr3L 16457588 intron CG33158 + chr3L 16457675 intron CG33158 + chr3L_10_16455001 chr3L_16455001 EF39_1-HE 2024 chr3L 16493947 16494005 chr3L 16494490 16494548 jockey 37 543 4.0 9.5 6.8 4.7 601 chr3L 16493947 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494248 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494548 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_37_16490001 chr3L_16490001 EF39_1-HE 2025 chr3L 16503618 16503653 chr3L 16503721 16503756 15 102 12.5 8.0 10.2 1.3 138 chr3L 16503618 intron CG43373 - chr3L 16503687 intron CG43373 - chr3L 16503756 intron CG43373 - chr3L_15_16500001 chr3L_16500001 EF39_1-HE 2026 chr3L 16514539 16514586 chr3L 16514663 16514709 9 124 5.0 1.5 3.2 2.1 170 chr3L 16514539 intron CG43373 - chr3L 16514624 intron CG43373 - chr3L 16514709 intron CG43373 - chr3L_9_16510001 chr3L_16510001 EF39_1-HE 2027 chr3L 16515306 16515335 chr3L 16515416 16515445 7 110 2.5 3.5 3.0 1.8 139 chr3L 16515306 intron CG43373 - chr3L 16515376 intron CG43373 - chr3L 16515445 intron CG43373 - chr3L_7_16515001 chr3L_16515001 EF39_1-HE 2028 chr3L 16533538 16533587 chr3L 16533675 16533724 9 137 2.5 3.0 2.8 2.4 186 chr3L 16533538 intron CG43373 - chr3L 16533631 intron CG43373 - chr3L 16533724 intron CG43373 - chr3L_9_16530001 chr3L_16530001 EF39_1-HE 2029 chr3L 16535910 16535939 chr3L 16536023 16536052 4 113 3.5 0.0 1.8 1.4 142 chr3L 16535910 intron CG43373 - chr3L 16535981 intron CG43373 - chr3L 16536052 intron CG43373 - chr3L_4_16535001 chr3L_16535001 EF39_1-HE 2030 chr3L 16555883 16555929 chr3L 16556017 16556063 6 132 3.0 2.0 2.5 1.7 180 chr3L 16555883 intergenic not near genes chr3L 16555973 intergenic not near genes chr3L 16556063 intergenic not near genes chr3L_6_16555001 chr3L_16555001 EF39_1-HE 2031 chr3L 16558181 16558190 chr3L 16558313 16558322 4 132 2.5 5.0 3.8 0.8 141 chr3L 16558181 intergenic CG4229 + chr3L 16558252 intergenic CG4229 + chr3L 16558322 intergenic CG4229 + chr3L_4_16555001 chr3L_16555001 EF39_1-HE 2032 chr3L 16665502 16665530 chr3L 16665610 16665643 6 112 0.5 6.5 3.5 1.3 141 chr3L 16665502 intron Galphaf - chr3L 16665572 intron Galphaf - chr3L 16665643 intron Galphaf - chr3L_6_16665001 chr3L_16665001 EF39_1-HE 2033 chr3L 16684003 16684037 chr3L 16689260 16689294 copia 12 5257 9.0 13.0 11.0 1.0 5291 chr3L 16684003 intron,intron Lasp -,CG43954 - chr3L 16686648 intron,intron Lasp -,CG43954 - chr3L 16689294 intron,intron,5` UTR Lasp -,CG43954 -,CR45179 + chr3L_12_16685001 chr3L_16685001 EF39_1-HE 2034 chr3L 16690741 16690781 chr3L 16690868 16690908 18 126 9.5 11.0 10.2 1.6 167 chr3L 16690741 intron,intron,intron Lasp -,CG43954 -,CR45179 + chr3L 16690824 intron,intron,intron Lasp -,CG43954 -,CR45179 + chr3L 16690908 intron,intron,intron Lasp -,CG43954 -,CR45179 + chr3L_18_16690001 chr3L_16690001 EF39_1-HE 2035 chr3L 16690784 16690791 chr3L 16690911 16690918 4 127 5.0 18.0 11.5 0.3 134 chr3L 16690784 intron,intron,intron Lasp -,CG43954 -,CR45179 + chr3L 16690851 intron,intron,intron Lasp -,CG43954 -,CR45179 + chr3L 16690918 intron,intron,intron Lasp -,CG43954 -,CR45179 + chr3L_4_16690001 chr3L_16690001 EF39_1-HE 2036 chr3L 16714836 16714869 chr3L 16714946 16714979 11 110 2.0 0.5 1.2 5.0 143 chr3L 16714836 intron Dab + chr3L 16714908 intron Dab + chr3L 16714979 intron Dab + chr3L_11_16710001 chr3L_16710001 EF39_1-HE 2037 chr3L 16757619 16757669 chr3L 16757735 16757785 9 115 6.5 9.0 7.8 1.0 166 chr3L 16757619 intergenic not near genes chr3L 16757702 intergenic not near genes chr3L 16757785 intergenic not near genes chr3L_9_16755001 chr3L_16755001 EF39_1-HE 2038 chr3L 16770444 16770480 chr3L 16770557 16770593 11 113 0.0 1.5 0.8 6.1 149 chr3L 16770444 intron Nrt + chr3L 16770518 intron Nrt + chr3L 16770593 intron Nrt + chr3L_11_16770001 chr3L_16770001 EF39_1-HE 2039 chr3L 16844995 16845041 chr3L 16845134 16845180 12 139 7.0 2.0 4.5 2.2 185 chr3L 16844995 intergenic CG9669 -,CG9715 +,TSG101 + chr3L 16845088 intergenic CG9669 -,CG9715 + chr3L 16845180 intergenic CG9669 -,CG9715 + chr3L_12_16845001 chr3L_16845001 EF39_1-HE 2040 chr3L 16869566 16869825 chr3L 16869674 16869929 6 108 9.0 3.5 6.2 0.8 363 chr3L 16869566 intron Lmpt + chr3L 16869748 intron Lmpt + chr3L 16869929 intron Lmpt + chr3L_6_16865001 chr3L_16865001 EF39_1-HE 2041 chr3L 16873318 16873345 chr3L 16873449 16873476 4 131 4.0 2.5 3.2 1.0 158 chr3L 16873318 intron Lmpt + chr3L 16873397 intron Lmpt + chr3L 16873476 intron Lmpt + chr3L_4_16870001 chr3L_16870001 EF39_1-HE 2042 chr3L 16890619 16890671 chr3L 16890726 16890778 11 107 1.5 4.5 3.0 2.8 159 chr3L 16890619 intron Lmpt + chr3L 16890698 intron Lmpt + chr3L 16890778 intron Lmpt + chr3L_11_16890001 chr3L_16890001 EF39_1-HE 2043 chr3L 16941381 16941409 chr3L 16941508 16941536 10 127 9.5 0.0 4.8 1.7 155 chr3L 16941381 intron Cpr73D - chr3L 16941458 intron Cpr73D - chr3L 16941536 intron Cpr73D - chr3L_10_16940001 chr3L_16940001 EF39_1-HE 2044 chr3L 16945707 16945751 chr3L 16954878 16954910 roo 17 9177 9.0 4.5 6.8 2.2 9203 chr3L 16945707 exon Obp73a + chr3L 16950308 intergenic not near genes chr3L 16954910 5` UTR Nc73EF + chr3L_17_16950001 chr3L_16950001 EF39_1-HE 2045 chr3L 16971025 16971244 chr3L 16971138 16971347 14 108 3.0 1.5 2.2 4.4 322 chr3L 16971025 intron Exn + chr3L 16971186 intron Exn + chr3L 16971347 intron Exn + chr3L_14_16970001 chr3L_16970001 EF39_1-HE 2046 chr3L 16973373 16973390 chr3L 23583084 23583101 4 6609711 3.0 15.0 9.0 0.4 6609728 chr3L 16973373 intron Exn + chr3L 20278237 exon gogo - chr3L 23583101 intron AGO3 + chr3L_4_20275001 chr3L_20275001 EF39_1-HE 2047 chr3L 16973778 16973816 chr3L 16973894 16973932 9 116 1.5 4.5 3.0 2.2 154 chr3L 16973778 intron Exn + chr3L 16973855 intron Exn + chr3L 16973932 intron Exn + chr3L_9_16970001 chr3L_16970001 EF39_1-HE 2048 chr3L 17034923 17034962 chr3L 17035127 17035176 G2 7 213 2.5 1.5 2.0 2.3 253 chr3L 17034923 intergenic not near genes chr3L 17035050 intergenic not near genes chr3L 17035176 intergenic beg + chr3L_7_17035001 chr3L_17035001 EF39_1-HE 2049 chr3L 17084979 17085034 chr3L 17094154 17094209 roo 29 9174 10.5 8.0 9.2 2.8 9230 chr3L 17084979 intron Rbp6 - chr3L 17089594 intron Rbp6 - chr3L 17094209 intron Rbp6 - chr3L_29_17085001 chr3L_17085001 EF39_1-HE 2050 chr3L 17120639 17120680 chr3L 17120741 17120782 9 102 3.0 3.0 3.0 2.2 143 chr3L 17120639 intron Rbp6 - chr3L 17120710 intron Rbp6 - chr3L 17120782 intron Rbp6 - chr3L_9_17120001 chr3L_17120001 EF39_1-HE 2051 chr3L 17149139 17149159 chr3L 17149246 17149266 4 107 9.5 0.0 4.8 0.7 127 chr3L 17149139 intron Rbp6 - chr3L 17149202 intron Rbp6 - chr3L 17149266 intron Rbp6 - chr3L_4_17145001 chr3L_17145001 EF39_1-HE 2052 chr3L 17171292 17171334 chr3L 17171564 17171606 15 272 4.0 1.5 2.8 3.9 314 chr3L 17171292 intron Rbp6 - chr3L 17171449 intron Rbp6 - chr3L 17171606 intron Rbp6 - chr3L_15_17170001 chr3L_17170001 EF39_1-HE 2053 chr3L 17172270 17172322 chr3L 17172377 17172429 7 106 6.5 4.5 5.5 1.1 159 chr3L 17172270 intron Rbp6 - chr3L 17172350 intron Rbp6 - chr3L 17172429 intron Rbp6 - chr3L_7_17170001 chr3L_17170001 EF39_1-HE 2054 chr3L 17230512 17230564 chr3L 17230640 17230692 18 128 1.5 3.5 2.5 5.1 180 chr3L 17230512 intron Rbp6 - chr3L 17230602 intron Rbp6 - chr3L 17230692 intron Rbp6 - chr3L_18_17230001 chr3L_17230001 EF39_1-HE 2055 chr3L 17247484 17247535 chr3L 17248962 17249012 6 1478 2.0 11.5 6.8 0.8 1528 chr3L 17247484 intron CR43870 + chr3L 17248248 intron CR43870 + chr3L 17249012 intron CR43870 + chr3L_6_17245001 chr3L_17245001 EF39_1-HE 2056 chr3L 17247625 17247640 chr3L 17249090 17249104 4 1464 4.0 13.0 8.5 0.4 1479 chr3L 17247625 intron CR43870 + chr3L 17248364 intron CR43870 + chr3L 17249104 intron CR43870 + chr3L_4_17245001 chr3L_17245001 EF39_1-HE 2057 chr3L 17272216 17272257 chr3L 17272375 17272416 4 159 5.0 6.5 5.8 0.6 200 chr3L 17272216 intergenic not near genes chr3L 17272316 intergenic not near genes chr3L 17272416 intergenic not near genes chr3L_4_17270001 chr3L_17270001 EF39_1-HE 2058 chr3L 17305238 17305298 chr3L 17305431 17305491 12 192 4.5 1.0 2.8 3.2 253 chr3L 17305238 intergenic not near genes chr3L 17305364 intergenic not near genes chr3L 17305491 intergenic not near genes chr3L_12_17305001 chr3L_17305001 EF39_1-HE 2059 chr3L 17310048 17310072 chr3L 17310163 17310187 9 115 0.0 0.5 0.2 7.5 139 chr3L 17310048 intergenic not near genes chr3L 17310118 intergenic not near genes chr3L 17310187 intergenic not near genes chr3L_9_17310001 chr3L_17310001 EF39_1-HE 2060 chr3L 17318780 17318804 chr3L 17318910 17318934 4 130 3.0 2.5 2.8 1.1 154 chr3L 17318780 intergenic not near genes chr3L 17318857 intergenic not near genes chr3L 17318934 intergenic not near genes chr3L_4_17315001 chr3L_17315001 EF39_1-HE 2061 chr3L 17332135 17332160 chr3L 17332244 17332269 5 109 2.5 5.0 3.8 1.0 134 chr3L 17332135 intergenic not near genes chr3L 17332202 intergenic not near genes chr3L 17332269 intergenic not near genes chr3L_5_17330001 chr3L_17330001 EF39_1-HE 2062 chr3L 17367424 17367446 chr3L 17367543 17367566 5 119 2.0 1.0 1.5 2.0 142 chr3L 17367424 intergenic CR45688 +,Cad74A - chr3L 17367495 intergenic CR45688 +,Cad74A - chr3L 17367566 intergenic Cad74A -,CR45688 + chr3L_5_17365001 chr3L_17365001 EF39_1-HE 2063 chr3L 17421608 17421635 chr3L 17421744 17421771 12 136 2.0 5.5 3.8 2.5 163 chr3L 17421608 intergenic blot -,Sec3 - chr3L 17421690 intergenic Sec3 -,blot - chr3L 17421771 intergenic Sec3 -,blot - chr3L_12_17420001 chr3L_17420001 EF39_1-HE 2064 chr3L 17483621 17483668 chr3L 17483742 17483789 11 121 3.0 4.5 3.8 2.3 168 chr3L 17483621 intron CG6333 - chr3L 17483705 intron CG6333 - chr3L 17483789 intron CG6333 - chr3L_11_17480001 chr3L_17480001 EF39_1-HE 2065 chr3L 17510718 17510760 chr3L 17510828 17510870 14 110 6.5 5.5 6.0 2.0 152 chr3L 17510718 exon Oatp74D + chr3L 17510794 intron Oatp74D + chr3L 17510870 intron Oatp74D + chr3L_14_17510001 chr3L_17510001 EF39_1-HE 2066 chr3L 17516954 17517006 chr3L 17524538 17524590 412 11 7584 6.0 5.5 5.8 1.6 7636 chr3L 17516954 intron CG7564 + chr3L 17520772 intron CG7564 + chr3L 17524590 3` UTR CG7564 + chr3L_11_17520001 chr3L_17520001 EF39_1-HE 2067 chr3L 17567946 17567987 chr3L 17568058 17568099 14 112 3.5 7.0 5.2 2.3 153 chr3L 17567946 intron Eip74EF - chr3L 17568022 intron Eip74EF - chr3L 17568099 intron Eip74EF - chr3L_14_17565001 chr3L_17565001 EF39_1-HE 2068 chr3L 17602557 17602578 chr3L 17602665 17602682 7 107 3.0 2.5 2.8 1.8 125 chr3L 17602557 intron Eip74EF - chr3L 17602620 intron Eip74EF - chr3L 17602682 5` UTR Eip74EF - chr3L_7_17600001 chr3L_17600001 EF39_1-HE 2069 chr3L 17654901 17654947 chr3L 17655010 17655056 14 109 5.5 3.5 4.5 2.5 155 chr3L 17654901 intron CG7484 + chr3L 17654978 intron CG7484 + chr3L 17655056 intron CG7484 + chr3L_14_17650001 chr3L_17650001 EF39_1-HE 2070 chr3L 17678882 17678892 chr3L 17678992 17679002 4 110 5.5 0.0 2.8 1.1 120 chr3L 17678882 intron CG34251 + chr3L 17678942 intron CG34251 + chr3L 17679002 intron CG34251 + chr3L_4_17675001 chr3L_17675001 EF39_1-HE 2071 chr3L 17689556 17689587 chr3L 17689659 17689673 13 100 8.5 6.0 7.2 1.6 117 chr3L 17689556 intergenic Ccn + chr3L 17689614 intergenic Ccn + chr3L 17689673 intergenic Ccn + chr3L_13_17685001 chr3L_17685001 EF39_1-HE 2072 chr3L 17690827 17690843 chr3L 17690933 17690949 5 106 2.0 3.0 2.5 1.4 122 chr3L 17690827 intron Ccn + chr3L 17690888 intron Ccn + chr3L 17690949 intron Ccn + chr3L_5_17690001 chr3L_17690001 EF39_1-HE 2073 chr3L 17730830 17730880 chr3L 17738186 17738233 mdg1 9 7356 1.0 1.5 1.2 4.1 7403 chr3L 17730830 intron Ccn + chr3L 17734532 intron Ccn + chr3L 17738233 intron Ccn + chr3L_9_17730001 chr3L_17730001 EF39_1-HE 2074 chr3L 17789819 17789877 chr3L 17789921 17789979 19 102 2.0 3.0 2.5 5.4 160 chr3L 17789819 intergenic not near genes chr3L 17789899 intergenic not near genes chr3L 17789979 intergenic not near genes chr3L_19_17785001 chr3L_17785001 EF39_1-HE 2075 chr3L 17790172 17790444 chr3L 17790311 17790606 18 145 6.5 4.0 5.2 2.9 434 chr3L 17790172 intergenic not near genes chr3L 17790389 intergenic not near genes chr3L 17790606 intergenic CG42815 - chr3L_18_17790001 chr3L_17790001 EF39_1-HE 2076 chr3L 17790447 17790622 chr3L 17790614 17790913 17 262 0.0 0.0 0.0 17.0 466 chr3L 17790447 intergenic not near genes chr3L 17790680 intergenic CG42815 - chr3L 17790913 intergenic CG42815 - chr3L_17_17790001 chr3L_17790001 EF39_1-HE 2077 chr3L 17790623 17790633 chr3L 17790914 17790924 4 291 0.0 8.5 4.2 0.8 301 chr3L 17790623 intergenic CG42815 - chr3L 17790774 intergenic CG42815 - chr3L 17790924 intergenic CG42815 - chr3L_4_17790001 chr3L_17790001 EF39_1-HE 2078 chr3L 17799816 17799842 chr3L 17801629 17801655 S-element 4 1813 2.0 4.5 3.2 1.0 1839 chr3L 17799816 intron NUCB1 - chr3L 17800736 intron NUCB1 - chr3L 17801655 intron NUCB1 - chr3L_4_17800001 chr3L_17800001 EF39_1-HE 2079 chr3L 17884666 17884708 chr3L 17884792 17884834 6 126 1.0 0.5 0.8 3.3 168 chr3L 17884666 intergenic CG5506 - chr3L 17884750 intergenic CG5506 - chr3L 17884834 intergenic CG5506 - chr3L_6_17880001 chr3L_17880001 EF39_1-HE 2080 chr3L 17906572 17906604 chr3L 17906698 17906730 4 125 1.5 3.5 2.5 1.1 158 chr3L 17906572 intron Prestin - chr3L 17906651 intron Prestin - chr3L 17906730 intron Prestin - chr3L_4_17905001 chr3L_17905001 EF39_1-HE 2081 chr3L 17918366 17918398 chr3L 17921193 17921227 opus 5 2828 5.0 3.0 4.0 1.0 2861 chr3L 17918366 intergenic not near genes chr3L 17919796 intergenic not near genes chr3L 17921227 intergenic not near genes chr3L_5_17915001 chr3L_17915001 EF39_1-HE 2082 chr3L 17923558 17923590 chr3L 17923661 17923693 7 103 2.5 1.5 2.0 2.3 135 chr3L 17923558 intergenic not near genes chr3L 17923626 intergenic not near genes chr3L 17923693 intergenic not near genes chr3L_7_17920001 chr3L_17920001 EF39_1-HE 2083 chr3L 17926054 17926081 chr3L 17926292 17926319 15 238 4.5 8.0 6.2 2.1 265 chr3L 17926054 intergenic not near genes chr3L 17926186 intergenic not near genes chr3L 17926319 intergenic not near genes chr3L_15_17925001 chr3L_17925001 EF39_1-HE 2084 chr3L 17991551 17991588 chr3L 17991655 17991692 10 104 5.0 7.0 6.0 1.4 141 chr3L 17991551 intron Eip75B - chr3L 17991622 intron Eip75B - chr3L 17991692 intron Eip75B - chr3L_10_17990001 chr3L_17990001 EF39_1-HE 2085 chr3L 18000648 18000701 chr3L 18000751 18000804 22 103 10.5 8.0 9.2 2.2 156 chr3L 18000648 intron Eip75B - chr3L 18000726 intron Eip75B - chr3L 18000804 intron Eip75B - chr3L_22_18000001 chr3L_18000001 EF39_1-HE 2086 chr3L 18013944 18013956 chr3L 18014059 18014071 6 115 7.5 0.5 4.0 1.2 127 chr3L 18013944 intron Eip75B - chr3L 18014008 intron Eip75B - chr3L 18014071 intron Eip75B - chr3L_6_18010001 chr3L_18010001 EF39_1-HE 2087 chr3L 18017737 18017740 chr3L 18017853 18017856 4 116 5.5 10.5 8.0 0.4 119 chr3L 18017737 intron Eip75B - chr3L 18017796 intron Eip75B - chr3L 18017856 intron Eip75B - chr3L_4_18015001 chr3L_18015001 EF39_1-HE 2088 chr3L 18029940 18029965 chr3L 18030043 18030068 6 103 8.0 0.5 4.2 1.2 128 chr3L 18029940 intron Eip75B - chr3L 18030004 intron Eip75B - chr3L 18030068 intron Eip75B - chr3L_6_18030001 chr3L_18030001 EF39_1-HE 2089 chr3L 18047684 18047730 chr3L 18056766 18056812 roo 12 9082 2.5 2.0 2.2 3.8 9128 chr3L 18047684 intron Eip75B - chr3L 18052248 intron Eip75B - chr3L 18056812 intron Eip75B - chr3L_12_18050001 chr3L_18050001 EF39_1-HE 2090 chr3L 18057949 18058007 chr3L 18058075 18058134 13 127 3.0 4.0 3.5 2.9 185 chr3L 18057949 intron Eip75B - chr3L 18058042 intron Eip75B - chr3L 18058134 intron Eip75B - chr3L_13_18055001 chr3L_18055001 EF39_1-HE 2091 chr3L 18064037 18064073 chr3L 18064148 18064185 12 112 2.0 1.5 1.8 4.3 148 chr3L 18064037 intron Eip75B - chr3L 18064111 intron Eip75B - chr3L 18064185 intron Eip75B - chr3L_12_18060001 chr3L_18060001 EF39_1-HE 2092 chr3L 18080526 18080578 chr3L 18080667 18080719 24 140 6.0 11.5 8.8 2.4 193 chr3L 18080526 intergenic not near genes chr3L 18080622 intergenic CR43253 - chr3L 18080719 intergenic CR43253 - chr3L_24_18080001 chr3L_18080001 EF39_1-HE 2093 chr3L 18081007 18081018 chr3L 18081115 18081126 5 108 4.0 5.0 4.5 0.9 119 chr3L 18081007 intergenic CR43253 - chr3L 18081066 intergenic CR43253 - chr3L 18081126 3` UTR CR43253 - chr3L_5_18080001 chr3L_18080001 EF39_1-HE 2094 chr3L 18092779 18092785 chr3L 18092920 18092926 5 141 0.0 0.5 0.2 4.2 147 chr3L 18092779 intron CG13698 - chr3L 18092852 intron CG13698 - chr3L 18092926 intron CG13698 - chr3L_5_18090001 chr3L_18090001 EF39_1-HE 2095 chr3L 18106233 18106265 chr3L 18106378 18106410 6 145 2.0 0.0 1.0 3.0 177 chr3L 18106233 intergenic CG13698 -,mRpS26 + chr3L 18106322 intergenic CG13698 -,mRpS26 + chr3L 18106410 intergenic mRpS26 +,CG13698 - chr3L_6_18105001 chr3L_18105001 EF39_1-HE 2096 chr3L 18119607 18119677 chr3L 18119745 18119801 7 132 0.0 3.0 1.5 2.8 194 chr3L 18119607 intron CG7341 + chr3L 18119704 intron CG7341 + chr3L 18119801 5` UTR CG7341 + chr3L_7_18115001 chr3L_18115001 EF39_1-HE 2097 chr3L 18124399 18124421 chr3L 18124509 18124531 8 110 2.0 4.0 3.0 2.0 132 chr3L 18124399 intergenic not near genes chr3L 18124465 intergenic not near genes chr3L 18124531 intergenic not near genes chr3L_8_18120001 chr3L_18120001 EF39_1-HE 2098 chr3L 18135736 18135754 chr3L 18135842 18135860 5 106 3.0 2.0 2.5 1.4 124 chr3L 18135736 intergenic CR44669 - chr3L 18135798 3` UTR CR44669 - chr3L 18135860 3` UTR CR44669 - chr3L_5_18135001 chr3L_18135001 EF39_1-HE 2099 chr3L 18163959 18164205 chr3L 18164187 18164398 9 224 0.0 0.0 0.0 9.0 439 chr3L 18163959 intergenic not near genes chr3L 18164178 intergenic not near genes chr3L 18164398 intergenic not near genes chr3L_9_18160001 chr3L_18160001 EF39_1-HE 2100 chr3L 18172664 18172703 chr3L 18172766 18172805 6 102 7.5 4.0 5.8 0.9 141 chr3L 18172664 intron W - chr3L 18172734 intron W - chr3L 18172805 intron W - chr3L_6_18170001 chr3L_18170001 EF39_1-HE 2101 chr3L 18186608 18186618 chr3L 18186773 18186780 7 164 9.5 2.0 5.8 1.0 172 chr3L 18186608 intergenic not near genes chr3L 18186694 intergenic not near genes chr3L 18186780 intergenic not near genes chr3L_7_18185001 chr3L_18185001 EF39_1-HE 2102 chr3L 18193876 18193899 chr3L 18193978 18194001 6 102 4.0 2.5 3.2 1.4 125 chr3L 18193876 intergenic not near genes chr3L 18193938 intergenic not near genes chr3L 18194001 intergenic not near genes chr3L_6_18190001 chr3L_18190001 EF39_1-HE 2103 chr3L 18198359 18198415 chr3L 18198480 18198535 10 121 1.0 2.0 1.5 4.0 176 chr3L 18198359 intergenic not near genes chr3L 18198447 intergenic not near genes chr3L 18198535 intergenic not near genes chr3L_10_18195001 chr3L_18195001 EF39_1-HE 2104 chr3L 18207548 18207560 chr3L 18207655 18207667 4 107 4.5 1.0 2.8 1.1 119 chr3L 18207548 intergenic not near genes chr3L 18207608 intergenic not near genes chr3L 18207667 intergenic not near genes chr3L_4_18205001 chr3L_18205001 EF39_1-HE 2105 chr3L 18229793 18229831 chr3L 18230443 18230480 10 650 2.5 3.5 3.0 2.5 687 chr3L 18229793 intergenic not near genes chr3L 18230136 intergenic not near genes chr3L 18230480 intergenic not near genes chr3L_10_18230001 chr3L_18230001 EF39_1-HE 2106 chr3L 18245240 18245270 chr3L 18245348 18245378 12 108 0.0 5.0 2.5 3.4 138 chr3L 18245240 intergenic not near genes chr3L 18245309 intergenic not near genes chr3L 18245378 intergenic not near genes chr3L_12_18245001 chr3L_18245001 EF39_1-HE 2107 chr3L 18258832 18258887 chr3L 18258984 18259039 17 151 3.5 5.5 4.5 3.1 207 chr3L 18258832 intergenic not near genes chr3L 18258936 intergenic not near genes chr3L 18259039 intergenic not near genes chr3L_17_18255001 chr3L_18255001 EF39_1-HE 2108 chr3L 18262444 18262484 chr3L 18262553 18262593 14 109 5.0 2.5 3.8 2.9 149 chr3L 18262444 intergenic not near genes chr3L 18262518 intergenic not near genes chr3L 18262593 intergenic not near genes chr3L_14_18260001 chr3L_18260001 EF39_1-HE 2109 chr3L 18262770 18262820 chr3L 18262894 18262914 13 128 0.0 7.0 3.5 2.9 144 chr3L 18262770 intergenic not near genes chr3L 18262842 intergenic not near genes chr3L 18262914 intergenic not near genes chr3L_13_18260001 chr3L_18260001 EF39_1-HE 2110 chr3L 18276074 18276095 chr3L 18276195 18276216 6 121 3.0 5.5 4.2 1.2 142 chr3L 18276074 intergenic not near genes chr3L 18276145 intergenic not near genes chr3L 18276216 intergenic not near genes chr3L_6_18275001 chr3L_18275001 EF39_1-HE 2111 chr3L 18287559 18287572 chr3L 18288061 18288074 7 502 4.5 5.5 5.0 1.2 515 chr3L 18287559 intergenic not near genes chr3L 18287816 intergenic not near genes chr3L 18288074 intergenic not near genes chr3L_7_18285001 chr3L_18285001 EF39_1-HE 2112 chr3L 18295552 18295608 chr3L 18295657 18295713 12 105 3.0 2.0 2.5 3.4 161 chr3L 18295552 intron CR43306 + chr3L 18295632 5` UTR CR43306 + chr3L 18295713 5` UTR CR43306 + chr3L_12_18295001 chr3L_18295001 EF39_1-HE 2113 chr3L 18359573 18359628 chr3L 18359691 18359746 21 118 4.0 6.5 5.2 3.4 173 chr3L 18359573 intergenic not near genes chr3L 18359660 intergenic not near genes chr3L 18359746 intergenic not near genes chr3L_21_18355001 chr3L_18355001 EF39_1-HE 2114 chr3L 18401634 18401649 chr3L 18401739 18401754 6 105 3.0 2.5 2.8 1.6 120 chr3L 18401634 intergenic not near genes chr3L 18401694 intergenic not near genes chr3L 18401754 intergenic not near genes chr3L_6_18400001 chr3L_18400001 EF39_1-HE 2115 chr3L 18448593 18448605 chr3L 18448711 18448723 6 118 5.0 3.0 4.0 1.2 130 chr3L 18448593 intergenic not near genes chr3L 18448658 intergenic not near genes chr3L 18448723 intergenic not near genes chr3L_6_18445001 chr3L_18445001 EF39_1-HE 2116 chr3L 18456251 18456284 chr3L 18456365 18456398 13 114 7.0 5.5 6.2 1.8 147 chr3L 18456251 intergenic CR44670 - chr3L 18456324 intergenic CR44670 - chr3L 18456398 3` UTR CR44670 - chr3L_13_18455001 chr3L_18455001 EF39_1-HE 2117 chr3L 18479045 18479074 chr3L 18479173 18479202 8 128 1.5 8.5 5.0 1.3 157 chr3L 18479045 5` UTR CR44673 + chr3L 18479124 5` UTR CR44673 + chr3L 18479202 5` UTR CR44673 + chr3L_8_18475001 chr3L_18475001 EF39_1-HE 2118 chr3L 18492316 18492369 chr3L 18492422 18492476 17 105 2.0 4.0 3.0 4.2 160 chr3L 18492316 intron AstC-R2 - chr3L 18492396 intron AstC-R2 - chr3L 18492476 intron AstC-R2 - chr3L_17_18490001 chr3L_18490001 EF39_1-HE 2119 chr3L 18506143 18506158 chr3L 18509632 18509647 F-element 4 3489 3.5 8.0 5.8 0.6 3504 chr3L 18506143 intergenic not near genes chr3L 18507895 intergenic not near genes chr3L 18509647 intergenic not near genes chr3L_4_18505001 chr3L_18505001 EF39_1-HE 2120 chr3L 18514887 18514932 chr3L 18520104 18520149 BS 18 5217 6.0 4.5 5.2 2.9 5262 chr3L 18514887 intergenic not near genes chr3L 18517518 intergenic not near genes chr3L 18520149 intergenic not near genes chr3L_18_18515001 chr3L_18515001 EF39_1-HE 2121 chr3L 18528606 18528653 chr3L 18537793 18537840 roo 14 9187 6.0 3.5 4.8 2.4 9234 chr3L 18528606 intergenic not near genes chr3L 18533223 intergenic not near genes chr3L 18537840 intergenic not near genes chr3L_14_18530001 chr3L_18530001 EF39_1-HE 2122 chr3L 18543158 18543424 chr3L 18543266 18543533 16 107 1.5 0.0 0.8 8.9 375 chr3L 18543158 intergenic not near genes chr3L 18543346 intergenic not near genes chr3L 18543533 intergenic not near genes chr3L_16_18540001 chr3L_18540001 EF39_1-HE 2123 chr3L 18593923 18593949 chr3L 18595929 18595955 Doc 4 2006 3.5 0.5 2.0 1.3 2032 chr3L 18593923 intergenic term - chr3L 18594939 intergenic not near genes chr3L 18595955 intergenic CR45389 + chr3L_4_18590001 chr3L_18590001 EF39_1-HE 2124 chr3L 18710743 18710777 chr3L 18718721 18718755 Stalker2 17 7978 3.5 8.0 5.8 2.5 8012 chr3L 18710743 intergenic not near genes chr3L 18714749 intergenic not near genes chr3L 18718755 intergenic not near genes chr3L_17_18710001 chr3L_18710001 EF39_1-HE 2125 chr3L 18721744 18721803 chr3L 18721861 18721920 9 117 3.5 4.5 4.0 1.8 176 chr3L 18721744 intergenic CG12477 - chr3L 18721832 intergenic CG12477 - chr3L 18721920 3` UTR CG12477 - chr3L_9_18720001 chr3L_18720001 EF39_1-HE 2126 chr3L 18736032 18736057 chr3L 18736153 18736178 11 121 5.0 5.5 5.2 1.8 146 chr3L 18736032 intergenic not near genes chr3L 18736105 intergenic not near genes chr3L 18736178 intergenic not near genes chr3L_11_18735001 chr3L_18735001 EF39_1-HE 2127 chr3L 18737304 18737354 chr3L 18737443 18737490 14 139 3.5 6.0 4.8 2.4 186 chr3L 18737304 intergenic not near genes chr3L 18737397 intergenic not near genes chr3L 18737490 intergenic not near genes chr3L_14_18735001 chr3L_18735001 EF39_1-HE 2128 chr3L 18772386 18772436 chr3L 18781093 18781143 roo 14 8707 4.0 4.0 4.0 2.8 8757 chr3L 18772386 intron ftz-f1 - chr3L 18776764 intron ftz-f1 - chr3L 18781143 intron ftz-f1 - chr3L_14_18775001 chr3L_18775001 EF39_1-HE 2129 chr3L 18784372 18784399 chr3L 18784487 18784514 9 114 3.5 7.5 5.5 1.4 142 chr3L 18784372 intron ftz-f1 - chr3L 18784443 intron ftz-f1 - chr3L 18784514 intron ftz-f1 - chr3L_9_18780001 chr3L_18780001 EF39_1-HE 2130 chr3L 18792551 18792588 chr3L 18792659 18792696 8 108 4.5 6.5 5.5 1.2 145 chr3L 18792551 intron ftz-f1 - chr3L 18792624 intron ftz-f1 - chr3L 18792696 intron ftz-f1 - chr3L_8_18790001 chr3L_18790001 EF39_1-HE 2131 chr3L 18797169 18797336 chr3L 18797322 18797446 10 111 2.0 7.5 4.8 1.7 277 chr3L 18797169 intron ftz-f1 - chr3L 18797308 intron ftz-f1 - chr3L 18797446 intron ftz-f1 - chr3L_10_18795001 chr3L_18795001 EF39_1-HE 2132 chr3L 18831842 18831879 chr3L 18831954 18831991 8 111 1.5 4.5 3.0 2.0 149 chr3L 18831842 intron Indy - chr3L 18831916 intron Indy - chr3L 18831991 intron Indy - chr3L_8_18830001 chr3L_18830001 EF39_1-HE 2133 chr3L 18832592 18832640 chr3L 18832696 18832744 19 103 4.0 8.5 6.2 2.6 152 chr3L 18832592 intron Indy - chr3L 18832668 intron Indy - chr3L 18832744 intron Indy - chr3L_19_18830001 chr3L_18830001 EF39_1-HE 2134 chr3L 18833765 18833810 chr3L 18834955 18835000 1360 12 1190 4.0 3.5 3.8 2.5 1235 chr3L 18833765 intron Indy - chr3L 18834382 intron Indy - chr3L 18835000 intron Indy - chr3L_12_18830001 chr3L_18830001 EF39_1-HE 2135 chr3L 18840842 18840889 chr3L 18841009 18841056 10 166 2.5 3.5 3.0 2.5 214 chr3L 18840842 intron Indy - chr3L 18840949 intron Indy - chr3L 18841056 intron Indy - chr3L_10_18840001 chr3L_18840001 EF39_1-HE 2136 chr3L 18841337 18841386 chr3L 18841471 18841520 18 134 5.0 7.0 6.0 2.6 183 chr3L 18841337 intron Indy - chr3L 18841428 intron Indy - chr3L 18841520 intron Indy - chr3L_18_18840001 chr3L_18840001 EF39_1-HE 2137 chr3L 18868939 18868995 chr3L 18869046 18869102 7 106 1.5 0.0 0.8 3.9 163 chr3L 18868939 3` UTR Dysb + chr3L 18869020 3` UTR Dysb + chr3L 18869102 3` UTR Dysb + chr3L_7_18865001 chr3L_18865001 EF39_1-HE 2138 chr3L 18885962 18886005 chr3L 18886064 18886107 6 102 0.0 0.0 0.0 6.0 145 chr3L 18885962 intron CG3961 - chr3L 18886034 intron CG3961 - chr3L 18886107 intron CG3961 - chr3L_6_18885001 chr3L_18885001 EF39_1-HE 2139 chr3L 18924456 18924504 chr3L 18924558 18924606 6 102 5.5 1.5 3.5 1.3 150 chr3L 18924456 intron CG32204 - chr3L 18924531 intron CG32204 - chr3L 18924606 intron CG32204 - chr3L_6_18920001 chr3L_18920001 EF39_1-HE 2140 chr3L 18933600 18933653 chr3L 18933720 18933772 9 120 3.0 2.0 2.5 2.6 172 chr3L 18933600 intron CG32204 - chr3L 18933686 intron CG32204 - chr3L 18933772 intron CG32204 - chr3L_9_18930001 chr3L_18930001 EF39_1-HE 2141 chr3L 18946301 18946329 chr3L 18948697 18948725 7 2396 20.0 18.5 19.2 0.3 2424 chr3L 18946301 intergenic CG32204 - chr3L 18947513 intergenic not near genes chr3L 18948725 intergenic not near genes chr3L_7_18945001 chr3L_18945001 EF39_1-HE 2142 chr3L 18962043 18962066 chr3L 18962153 18962176 7 110 6.5 8.5 7.5 0.8 133 chr3L 18962043 intergenic not near genes chr3L 18962110 intergenic not near genes chr3L 18962176 intergenic not near genes chr3L_7_18960001 chr3L_18960001 EF39_1-HE 2143 chr3L 18969523 18969575 chr3L 18969625 18969677 24 102 4.0 4.0 4.0 4.8 154 chr3L 18969523 intergenic not near genes chr3L 18969600 intergenic not near genes chr3L 18969677 intergenic not near genes chr3L_24_18965001 chr3L_18965001 EF39_1-HE 2144 chr3L 19008822 19008870 chr3L 19009185 19009234 jockey 18 362 3.5 3.5 3.5 4.0 412 chr3L 19008822 intron nkd - chr3L 19009028 intron nkd - chr3L 19009234 intron nkd - chr3L_18_19005001 chr3L_19005001 EF39_1-HE 2145 chr3L 19015151 19015216 chr3L 19015261 19015322 11 109 2.5 4.5 3.5 2.4 171 chr3L 19015151 intron nkd - chr3L 19015236 intron nkd - chr3L 19015322 intron nkd - chr3L_11_19015001 chr3L_19015001 EF39_1-HE 2146 chr3L 19018803 19018857 chr3L 19018920 19018974 17 117 7.0 8.5 7.8 1.9 171 chr3L 19018803 intron nkd - chr3L 19018888 intron nkd - chr3L 19018974 intron nkd - chr3L_17_19015001 chr3L_19015001 EF39_1-HE 2147 chr3L 19068520 19068567 chr3L 19068639 19068686 12 118 5.5 6.0 5.8 1.8 166 chr3L 19068520 3` UTR Mkp3 - chr3L 19068603 3` UTR Mkp3 - chr3L 19068686 3` UTR Mkp3 - chr3L_12_19065001 chr3L_19065001 EF39_1-HE 2148 chr3L 19082019 19082064 chr3L 19082147 19082192 13 128 3.5 5.5 4.5 2.4 173 chr3L 19082019 intron Mkp3 - chr3L 19082106 intron Mkp3 - chr3L 19082192 intron Mkp3 - chr3L_13_19080001 chr3L_19080001 EF39_1-HE 2149 chr3L 19097902 19097958 chr3L 19101542 19101598 18 3640 27.5 24.5 26.0 0.7 3696 chr3L 19097902 intergenic CG14079 +,CG10424 - chr3L 19099750 exon Gem2 - chr3L 19101598 intergenic not near genes chr3L_18_19095001 chr3L_19095001 EF39_1-HE 2150 chr3L 19115636 19115672 chr3L 19115840 19115875 BS 9 204 2.5 5.0 3.8 1.9 239 chr3L 19115636 intron CG14082 - chr3L 19115756 intron CG14082 - chr3L 19115875 intron CG14082 - chr3L_9_19115001 chr3L_19115001 EF39_1-HE 2151 chr3L 19117019 19117076 chr3L 19124492 19124549 mdg1 24 7472 3.0 2.0 2.5 6.9 7530 chr3L 19117019 intron CG14082 - chr3L 19120784 intron CG14082 - chr3L 19124549 intron CG14082 - chr3L_24_19120001 chr3L_19120001 EF39_1-HE 2152 chr3L 19137663 19137712 chr3L 19137872 19137919 11 209 5.0 4.0 4.5 2.0 256 chr3L 19137663 intron CG14082 - chr3L 19137791 intron CG14082 - chr3L 19137919 intron CG14082 - chr3L_11_19135001 chr3L_19135001 EF39_1-HE 2153 chr3L 19154206 19154248 chr3L 19154835 19154876 16 628 44.5 38.0 41.2 0.4 670 chr3L 19154206 intron fz2 - chr3L 19154541 intron fz2 - chr3L 19154876 intron fz2 - chr3L_16_19150001 chr3L_19150001 EF39_1-HE 2154 chr3L 19182367 19182409 chr3L 19182473 19182516 10 107 2.0 1.5 1.8 3.6 149 chr3L 19182367 intron fz2 - chr3L 19182442 intron fz2 - chr3L 19182516 intron fz2 - chr3L_10_19180001 chr3L_19180001 EF39_1-HE 2155 chr3L 19206773 19206835 chr3L 19206879 19206941 15 106 2.0 0.0 1.0 7.5 168 chr3L 19206773 intron fz2 - chr3L 19206857 intron fz2 - chr3L 19206941 intron fz2 - chr3L_15_19205001 chr3L_19205001 EF39_1-HE 2156 chr3L 19208034 19208086 chr3L 19209434 19209451 Doc 20 1397 9.0 3.0 6.0 2.9 1417 chr3L 19208034 intron fz2 - chr3L 19208742 intron fz2 - chr3L 19209451 intron fz2 - chr3L_20_19205001 chr3L_19205001 EF39_1-HE 2157 chr3L 19210105 19210138 chr3L 19210227 19210261 11 122 0.0 9.5 4.8 1.9 156 chr3L 19210105 intron fz2 - chr3L 19210183 intron fz2 - chr3L 19210261 intron fz2 - chr3L_11_19210001 chr3L_19210001 EF39_1-HE 2158 chr3L 19238716 19238749 chr3L 19238849 19238882 11 133 4.5 5.5 5.0 1.8 166 chr3L 19238716 intergenic not near genes chr3L 19238799 intergenic not near genes chr3L 19238882 intergenic not near genes chr3L_11_19235001 chr3L_19235001 EF39_1-HE 2159 chr3L 19269794 19269838 chr3L 19270023 19270045 6 226 4.5 2.0 3.2 1.4 251 chr3L 19269794 intron,exon CG14085 +,CG14088 - chr3L 19269920 intron,exon CG14085 +,CG14088 - chr3L 19270045 intron,exon CG14085 +,CG14088 - chr3L_6_19265001 chr3L_19265001 EF39_1-HE 2160 chr3L 19319614 19319639 chr3L 19319716 19319741 8 102 2.0 2.5 2.2 2.5 127 chr3L 19319614 intron pip - chr3L 19319678 intron pip - chr3L 19319741 intron pip - chr3L_8_19315001 chr3L_19315001 EF39_1-HE 2161 chr3L 19325383 19325433 chr3L 19325480 19325535 12 102 3.0 4.5 3.8 2.5 152 chr3L 19325383 intron pip - chr3L 19325459 intron pip - chr3L 19325535 intron pip - chr3L_12_19325001 chr3L_19325001 EF39_1-HE 2162 chr3L 19398916 19398929 chr3L 19403659 19403672 F-element 4 4743 4.0 6.0 5.0 0.7 4756 chr3L 19398916 intron CG32206 - chr3L 19401294 intron CG32206 - chr3L 19403672 intron CG32206 - chr3L_4_19400001 chr3L_19400001 EF39_1-HE 2163 chr3L 19413665 19413713 chr3L 19413907 19413955 12 242 2.5 7.5 5.0 2.0 290 chr3L 19413665 intergenic not near genes chr3L 19413810 intergenic not near genes chr3L 19413955 intergenic not near genes chr3L_12_19410001 chr3L_19410001 EF39_1-HE 2164 chr3L 19439161 19439193 chr3L 19439265 19439298 14 105 3.5 2.0 2.8 3.7 137 chr3L 19439161 intergenic not near genes chr3L 19439230 intergenic not near genes chr3L 19439298 intergenic not near genes chr3L_14_19435001 chr3L_19435001 EF39_1-HE 2165 chr3L 19452748 19452807 chr3L 19452900 19452959 8 152 1.0 1.0 1.0 4.0 211 chr3L 19452748 intergenic not near genes chr3L 19452854 intergenic not near genes chr3L 19452959 intergenic not near genes chr3L_8_19450001 chr3L_19450001 EF39_1-HE 2166 chr3L 19561321 19561355 chr3L 19561498 19561532 8 176 1.5 3.5 2.5 2.3 211 chr3L 19561321 intergenic CR44676 - chr3L 19561426 intergenic CR44676 - chr3L 19561532 intergenic CR44676 - chr3L_8_19560001 chr3L_19560001 EF39_1-HE 2167 chr3L 19643227 19643273 chr3L 19643352 19643398 11 125 0.0 7.0 3.5 2.4 171 chr3L 19643227 intergenic CG8786 - chr3L 19643312 intergenic CG8786 - chr3L 19643398 intergenic not near genes chr3L_11_19640001 chr3L_19640001 EF39_1-HE 2168 chr3L 19666179 19666223 chr3L 19666383 19666427 17 204 2.5 4.5 3.5 3.8 248 chr3L 19666179 intergenic not near genes chr3L 19666303 intergenic not near genes chr3L 19666427 intergenic not near genes chr3L_17_19665001 chr3L_19665001 EF39_1-HE 2169 chr3L 19697782 19697841 chr3L 19697901 19697956 14 119 7.5 6.5 7.0 1.8 174 chr3L 19697782 intergenic not near genes chr3L 19697869 intergenic not near genes chr3L 19697956 intergenic not near genes chr3L_14_19695001 chr3L_19695001 EF39_1-HE 2170 chr3L 19820272 19820306 chr3L 19827847 19827881 412 9 7575 3.5 2.5 3.0 2.2 7609 chr3L 19820272 intron Deaf1 + chr3L 19824076 intron Deaf1 + chr3L 19827881 intron Deaf1 + chr3L_9_19820001 chr3L_19820001 EF39_1-HE 2171 chr3L 19861799 19861846 chr3L 19863613 19863660 S-element 6 1814 2.5 3.0 2.8 1.6 1861 chr3L 19861799 5` UTR CR45433 + chr3L 19862730 intergenic not near genes chr3L 19863660 intergenic not near genes chr3L_6_19860001 chr3L_19860001 EF39_1-HE 2172 chr3L 19933512 19933557 chr3L 19934360 19934405 11 848 7.5 2.0 4.8 1.9 893 chr3L 19933512 intergenic CR45678 + chr3L 19933958 5` UTR CR45678 + chr3L 19934405 intergenic CR45678 + chr3L_11_19930001 chr3L_19930001 EF39_1-HE 2173 chr3L 19981182 19981225 chr3L 19981288 19981331 10 103 2.5 3.5 3.0 2.5 149 chr3L 19981182 intergenic not near genes chr3L 19981256 intergenic CG17732 + chr3L 19981331 intergenic CG17732 + chr3L_10_19980001 chr3L_19980001 EF39_1-HE 2174 chr3L 20058762 20058816 chr3L 20058864 20058918 13 102 6.0 4.0 5.0 2.2 156 chr3L 20058762 3` UTR sNPF-R - chr3L 20058840 3` UTR sNPF-R - chr3L 20058918 3` UTR sNPF-R - chr3L_13_20055001 chr3L_20055001 EF39_1-HE 2175 chr3L 20113460 20113493 chr3L 20113581 20113614 5 121 3.0 5.0 4.0 1.0 154 chr3L 20113460 intergenic not near genes chr3L 20113537 intergenic not near genes chr3L 20113614 intergenic not near genes chr3L_5_20110001 chr3L_20110001 EF39_1-HE 2176 chr3L 20113650 20113677 chr3L 20122933 20122960 roo 5 9283 4.0 3.0 3.5 1.1 9310 chr3L 20113650 intergenic not near genes chr3L 20118305 intergenic not near genes chr3L 20122960 intergenic not near genes chr3L_5_20115001 chr3L_20115001 EF39_1-HE 2177 chr3L 20148264 20148312 chr3L 20148380 20148428 8 114 4.0 3.5 3.8 1.7 164 chr3L 20148264 intergenic not near genes chr3L 20148346 intergenic not near genes chr3L 20148428 intergenic not near genes chr3L_8_20145001 chr3L_20145001 EF39_1-HE 2178 chr3L 20187443 20187462 chr3L 20187549 20187561 4 104 2.5 2.0 2.2 1.2 118 chr3L 20187443 intron CG42674 - chr3L 20187502 intron CG42674 - chr3L 20187561 intron CG42674 - chr3L_4_20185001 chr3L_20185001 EF39_1-HE 2179 chr3L 20232629 20232684 chr3L 20232736 20232791 15 107 1.5 4.0 2.8 3.9 162 chr3L 20232629 exon CG13813 + chr3L 20232710 exon CG13813 + chr3L 20232791 exon CG13813 + chr3L_15_20230001 chr3L_20230001 EF39_1-HE 2180 chr3L 20257308 20257362 chr3L 20258454 20258508 pogo 18 1146 3.0 2.5 2.8 4.7 1200 chr3L 20257308 intron rdgC + chr3L 20257908 intron rdgC + chr3L 20258508 intron rdgC + chr3L_18_20255001 chr3L_20255001 EF39_1-HE 2181 chr3L 20295374 20295428 chr3L 20295644 20295698 19 270 6.0 3.0 4.5 3.5 324 chr3L 20295374 intergenic gogo -,FRG1 - chr3L 20295536 intergenic FRG1 -,gogo - chr3L 20295698 intergenic FRG1 - chr3L_19_20295001 chr3L_20295001 EF39_1-HE 2182 chr3L 20315625 20315672 chr3L 20315731 20315778 7 106 2.0 2.0 2.0 2.3 153 chr3L 20315625 3` UTR,intron alphaSnap +,CR43875 - chr3L 20315702 3` UTR,intron alphaSnap +,CR43875 - chr3L 20315778 3` UTR,intron alphaSnap +,CR43875 - chr3L_7_20315001 chr3L_20315001 EF39_1-HE 2183 chr3L 20345593 20345632 chr3L 20345694 20345739 13 106 0.0 5.0 2.5 3.7 146 chr3L 20345593 intergenic Rbbp5 - chr3L 20345666 intergenic Rbbp5 - chr3L 20345739 3` UTR Rbbp5 - chr3L_13_20345001 chr3L_20345001 EF39_1-HE 2184 chr3L 20476737 20476777 chr3L 20484362 20484402 springer 6 7625 4.0 3.5 3.8 1.2 7665 chr3L 20476737 3` UTR isoQC + chr3L 20480570 intergenic not near genes chr3L 20484402 3` UTR ZnT77C - chr3L_6_20480001 chr3L_20480001 EF39_1-HE 2185 chr3L 20590039 20590097 chr3L 20590604 20590662 412 29 564 7.0 5.5 6.2 4.0 623 chr3L 20590039 intergenic not near genes chr3L 20590350 intergenic not near genes chr3L 20590662 intergenic not near genes chr3L_29_20590001 chr3L_20590001 EF39_1-HE 2186 chr3L 20695693 20695736 chr3L 20695877 20695920 17 184 10.0 5.0 7.5 2.0 227 chr3L 20695693 intergenic kni - chr3L 20695806 intergenic kni - chr3L 20695920 intergenic not near genes chr3L_17_20695001 chr3L_20695001 EF39_1-HE 2187 chr3L 20739476 20739495 chr3L 20739617 20739636 4 141 5.0 2.0 3.5 0.9 160 chr3L 20739476 intron CG13252 + chr3L 20739556 intron CG13252 + chr3L 20739636 intron CG13252 + chr3L_4_20735001 chr3L_20735001 EF39_1-HE 2188 chr3L 20821270 20821307 chr3L 20824765 20824802 NOF 6 3495 3.0 4.5 3.8 1.2 3532 chr3L 20821270 intron Pka-R1 + chr3L 20823036 intron Pka-R1 + chr3L 20824802 intron Pka-R1 + chr3L_6_20820001 chr3L_20820001 EF39_1-HE 2189 chr3L 20830960 20831015 chr3L 20831081 20831135 11 121 3.5 3.5 3.5 2.4 175 chr3L 20830960 intron Pka-R1 + chr3L 20831048 intron Pka-R1 + chr3L 20831135 intron Pka-R1 + chr3L_11_20830001 chr3L_20830001 EF39_1-HE 2190 chr3L 20849246 20849288 chr3L 20849351 20849393 12 104 3.5 5.5 4.5 2.2 147 chr3L 20849246 intron CG32432 - chr3L 20849320 intron CG32432 - chr3L 20849393 intron CG32432 - chr3L_12_20845001 chr3L_20845001 EF39_1-HE 2191 chr3L 20876362 20876418 chr3L 20876481 20876493 25 110 4.0 5.5 4.8 4.3 131 chr3L 20876362 intron CG32432 - chr3L 20876428 intron CG32432 - chr3L 20876493 intron CG32432 - chr3L_25_20875001 chr3L_20875001 EF39_1-HE 2192 chr3L 20931769 20931825 chr3L 20931883 20931938 8 113 2.0 1.0 1.5 3.2 169 chr3L 20931769 intron fng - chr3L 20931854 intron fng - chr3L 20931938 intron fng - chr3L_8_20930001 chr3L_20930001 EF39_1-HE 2193 chr3L 21014894 21014947 chr3L 21023401 21023454 Tirant 28 8506 5.5 9.0 7.2 3.4 8560 chr3L 21014894 intron skd - chr3L 21019174 intron skd - chr3L 21023454 intron skd - chr3L_28_21015001 chr3L_21015001 EF39_1-HE 2194 chr3L 21044169 21044217 chr3L 21044276 21044324 22 107 7.0 7.0 7.0 2.8 155 chr3L 21044169 intron siz + chr3L 21044246 intron siz + chr3L 21044324 intron siz + chr3L_22_21040001 chr3L_21040001 EF39_1-HE 2195 chr3L 21067945 21067980 chr3L 21068033 21068086 10 104 3.0 3.0 3.0 2.5 141 chr3L 21067945 intron siz + chr3L 21068016 intron siz + chr3L 21068086 intron siz + chr3L_10_21065001 chr3L_21065001 EF39_1-HE 2196 chr3L 21103057 21103114 chr3L 21103171 21103183 11 104 2.0 2.5 2.2 3.4 126 chr3L 21103057 intron ko - chr3L 21103120 intron ko - chr3L 21103183 intron ko - chr3L_11_21100001 chr3L_21100001 EF39_1-HE 2197 chr3L 21151844 21151897 chr3L 21156954 21157007 flea 15 5110 4.0 4.5 4.2 2.9 5163 chr3L 21151844 intron Ac78C - chr3L 21154426 intron Ac78C - chr3L 21157007 intron Ac78C - chr3L_15_21150001 chr3L_21150001 EF39_1-HE 2198 chr3L 21160684 21160741 chr3L 21160787 21160844 23 103 4.0 5.0 4.5 4.2 160 chr3L 21160684 5` UTR Ac78C - chr3L 21160764 5` UTR Ac78C - chr3L 21160844 5` UTR Ac78C - chr3L_23_21160001 chr3L_21160001 EF39_1-HE 2199 chr3L 21298583 21298629 chr3L 21298685 21298731 18 101 7.5 7.5 7.5 2.1 148 chr3L 21298583 intergenic CG43702 + chr3L 21298657 intergenic CG43702 + chr3L 21298731 intron CG43702 + chr3L_18_21295001 chr3L_21295001 EF39_1-HE 2200 chr3L 21306135 21306178 chr3L 21315320 21315363 roo 8 9184 6.0 5.5 5.8 1.2 9228 chr3L 21306135 3` UTR CG7632 + chr3L 21310749 intron Pc - chr3L 21315363 3` UTR Pc - chr3L_8_21310001 chr3L_21310001 EF39_1-HE 2201 chr3L 21386123 21386180 chr3L 21386803 21386860 20 680 2.5 2.0 2.2 6.2 737 chr3L 21386123 intron rgn + chr3L 21386492 intron rgn + chr3L 21386860 intron rgn + chr3L_20_21385001 chr3L_21385001 EF39_1-HE 2202 chr3L 21406983 21407020 chr3L 21407088 21407125 8 105 4.0 4.0 4.0 1.6 142 chr3L 21406983 intron rgn + chr3L 21407054 intron rgn + chr3L 21407125 intron rgn + chr3L_8_21405001 chr3L_21405001 EF39_1-HE 2203 chr3L 21414515 21414544 chr3L 21414617 21414645 6 102 2.0 9.0 5.5 0.9 130 chr3L 21414515 intron rgn + chr3L 21414580 intron rgn + chr3L 21414645 intron rgn + chr3L_6_21410001 chr3L_21410001 EF39_1-HE 2204 chr3L 21415437 21415476 chr3L 21415531 21415581 17 103 3.5 5.0 4.2 3.3 144 chr3L 21415437 intron rgn + chr3L 21415509 intron rgn + chr3L 21415581 intron rgn + chr3L_17_21415001 chr3L_21415001 EF39_1-HE 2205 chr3L 21417851 21417870 chr3L 21418115 21418125 5 262 15.0 0.0 7.5 0.6 274 chr3L 21417851 intron rgn + chr3L 21417988 intron rgn + chr3L 21418125 intron rgn + chr3L_5_21415001 chr3L_21415001 EF39_1-HE 2206 chr3L 21459836 21459887 chr3L 21459940 21459991 23 104 6.0 5.0 5.5 3.5 155 chr3L 21459836 intergenic not near genes chr3L 21459914 intergenic not near genes chr3L 21459991 intergenic not near genes chr3L_23_21455001 chr3L_21455001 EF39_1-HE 2207 chr3L 21488970 21489010 chr3L 21493446 21493486 13 4475 13.5 28.0 20.8 0.6 4516 chr3L 21488970 intron Neu2 - chr3L 21491228 intergenic CG7202 - chr3L 21493486 exon CG7519 + chr3L_13_21490001 chr3L_21490001 EF39_1-HE 2208 chr3L 21498829 21498861 chr3L 21500491 21500523 1360 9 1661 3.5 5.0 4.2 1.7 1694 chr3L 21498829 5` UTR,intron CR43933 +,Glg1 - chr3L 21499676 intron Glg1 - chr3L 21500523 intron Glg1 - chr3L_9_21495001 chr3L_21495001 EF39_1-HE 2209 chr3L 21501150 21501167 chr3L 21501270 21501287 1360 4 120 1.0 8.0 4.5 0.7 137 chr3L 21501150 intron Glg1 - chr3L 21501218 intron Glg1 - chr3L 21501287 intron Glg1 - chr3L_4_21500001 chr3L_21500001 EF39_1-HE 2210 chr3L 21536377 21536432 chr3L 21536653 21536707 9 276 1.5 2.5 2.0 3.0 330 chr3L 21536377 intron ppk5 + chr3L 21536542 intron ppk5 + chr3L 21536707 intron ppk5 + chr3L_9_21535001 chr3L_21535001 EF39_1-HE 2211 chr3L 21637301 21637349 chr3L 21637414 21637461 10 112 5.0 4.0 4.5 1.8 160 chr3L 21637301 exon CG32444 + chr3L 21637381 intron CG32444 + chr3L 21637461 intron CG32444 + chr3L_10_21635001 chr3L_21635001 EF39_1-HE 2212 chr3L 21749304 21749338 chr3L 21754482 21754524 Doc 6 5184 4.5 4.5 4.5 1.1 5220 chr3L 21749304 intron Syn1 - chr3L 21751914 intron Syn1 - chr3L 21754524 intron Syn1 - chr3L_6_21750001 chr3L_21750001 EF39_1-HE 2213 chr3L 21771990 21772024 chr3L 21772203 21772237 5 213 4.0 2.5 3.2 1.2 247 chr3L 21771990 intron CG42689 + chr3L 21772114 intron CG42689 + chr3L 21772237 intron CG42689 + chr3L_5_21770001 chr3L_21770001 EF39_1-HE 2214 chr3L 21776667 21776693 chr3L 21776780 21776806 8 113 2.5 10.5 6.5 1.1 139 chr3L 21776667 intron,intron CG42689 +,CG42552 + chr3L 21776736 intron,intron CG42689 +,CG42552 + chr3L 21776806 intron,intron CG42689 +,CG42552 + chr3L_8_21775001 chr3L_21775001 EF39_1-HE 2215 chr3L 21798749 21798771 chr3L 21798864 21798886 6 115 4.5 4.5 4.5 1.1 137 chr3L 21798749 intergenic not near genes chr3L 21798818 intergenic not near genes chr3L 21798886 intergenic not near genes chr3L_6_21795001 chr3L_21795001 EF39_1-HE 2216 chr3L 21809945 21809961 chr3L 21810066 21810081 4 120 9.5 12.5 11.0 0.3 136 chr3L 21809945 intron eg + chr3L 21810013 intron eg + chr3L 21810081 intron eg + chr3L_4_21810001 chr3L_21810001 EF39_1-HE 2217 chr3L 21836721 21836754 chr3L 21836833 21836866 7 112 0.5 5.0 2.8 1.8 145 chr3L 21836721 3` UTR P5CDh1 - chr3L 21836794 3` UTR P5CDh1 - chr3L 21836866 3` UTR P5CDh1 - chr3L_7_21835001 chr3L_21835001 EF39_1-HE 2218 chr3L 21849475 21849533 chr3L 21849583 21849641 26 108 5.0 9.0 7.0 3.2 166 chr3L 21849475 intron mub + chr3L 21849558 intron mub + chr3L 21849641 intron mub + chr3L_26_21845001 chr3L_21845001 EF39_1-HE 2219 chr3L 21882761 21882806 chr3L 21882866 21882911 6 105 1.5 5.5 3.5 1.3 150 chr3L 21882761 intron mub + chr3L 21882836 intron mub + chr3L 21882911 intron mub + chr3L_6_21880001 chr3L_21880001 EF39_1-HE 2220 chr3L 21935725 21935779 chr3L 21936490 21936544 1360 16 764 3.0 4.5 3.8 3.3 819 chr3L 21935725 intron CG7442 + chr3L 21936134 intron CG7442 + chr3L 21936544 intron CG7442 + chr3L_16_21935001 chr3L_21935001 EF39_1-HE 2221 chr3L 21976145 21976195 chr3L 21976258 21976308 14 111 3.5 4.5 4.0 2.8 163 chr3L 21976145 intron CG7470 + chr3L 21976226 intron CG7470 + chr3L 21976308 exon CG7470 + chr3L_14_21975001 chr3L_21975001 EF39_1-HE 2222 chr3L 22002560 22002616 chr3L 22002815 22002871 33 255 4.5 9.5 7.0 4.1 311 chr3L 22002560 intergenic not near genes chr3L 22002716 intergenic not near genes chr3L 22002871 intergenic not near genes chr3L_33_22000001 chr3L_22000001 EF39_1-HE 2223 chr3L 22009974 22010028 chr3L 22010083 22010137 24 109 5.0 5.5 5.2 3.9 163 chr3L 22009974 intergenic not near genes chr3L 22010056 intergenic not near genes chr3L 22010137 intergenic not near genes chr3L_24_22010001 chr3L_22010001 EF39_1-HE 2224 chr3L 22033667 22033716 chr3L 22033771 22033820 15 103 4.5 2.5 3.5 3.3 153 chr3L 22033667 intergenic not near genes chr3L 22033744 intergenic not near genes chr3L 22033820 intergenic not near genes chr3L_15_22030001 chr3L_22030001 EF39_1-HE 2225 chr3L 22046155 22046208 chr3L 22046284 22046337 28 129 9.0 6.0 7.5 3.3 182 chr3L 22046155 intron Oct-TyrR + chr3L 22046246 intron Oct-TyrR + chr3L 22046337 intron Oct-TyrR + chr3L_28_22045001 chr3L_22045001 EF39_1-HE 2226 chr3L 22045950 22046002 chr3L 22050192 22050244 10 4242 34.0 28.0 31.0 0.3 4294 chr3L 22045950 intron Oct-TyrR + chr3L 22048097 intron Oct-TyrR + chr3L 22050244 intron Oct-TyrR + chr3L_10_22045001 chr3L_22045001 EF39_1-HE 2227 chr3L 22099669 22099700 chr3L 22105881 22105912 3S18 10 6212 3.5 2.5 3.0 2.5 6243 chr3L 22099669 intergenic not near genes chr3L 22102790 intergenic not near genes chr3L 22105912 intergenic not near genes chr3L_10_22100001 chr3L_22100001 EF39_1-HE 2228 chr3L 22114775 22114807 chr3L 22114879 22114911 10 104 4.5 3.5 4.0 2.0 136 chr3L 22114775 intergenic not near genes chr3L 22114843 intergenic not near genes chr3L 22114911 intergenic not near genes chr3L_10_22110001 chr3L_22110001 EF39_1-HE 2229 chr3L 22193429 22193477 chr3L 22193534 22193582 13 104 1.5 3.0 2.2 4.1 153 chr3L 22193429 intron olf413 + chr3L 22193506 intron olf413 + chr3L 22193582 intron olf413 + chr3L_13_22190001 chr3L_22190001 EF39_1-HE 2230 chr3L 22194302 22194320 chr3L 22194405 22194423 4 103 5.5 4.5 5.0 0.7 121 chr3L 22194302 intron olf413 + chr3L 22194362 intron olf413 + chr3L 22194423 intron olf413 + chr3L_4_22190001 chr3L_22190001 EF39_1-HE 2231 chr3L 22195874 22195916 chr3L 22195980 22196022 14 106 5.5 7.0 6.2 1.9 148 chr3L 22195874 intron olf413 + chr3L 22195948 intron olf413 + chr3L 22196022 intron olf413 + chr3L_14_22195001 chr3L_22195001 EF39_1-HE 2232 chr3L 22274067 22274120 chr3L 22274196 22274218 10 126 4.0 3.5 3.8 2.1 151 chr3L 22274067 5` UTR srpk79D + chr3L 22274142 5` UTR srpk79D + chr3L 22274218 5` UTR srpk79D + chr3L_10_22270001 chr3L_22270001 EF39_1-HE 2233 chr3L 22348573 22348617 chr3L 22348750 22348794 12 177 1.5 2.5 2.0 4.0 221 chr3L 22348573 intron Ten-m - chr3L 22348684 intron Ten-m - chr3L 22348794 intron Ten-m - chr3L_12_22345001 chr3L_22345001 EF39_1-HE 2234 chr3L 22366689 22366741 chr3L 22366793 22366845 19 103 2.5 9.0 5.8 2.8 156 chr3L 22366689 intron Ten-m - chr3L 22366767 intron Ten-m - chr3L 22366845 intron Ten-m - chr3L_19_22365001 chr3L_22365001 EF39_1-HE 2235 chr3L 22409869 22409923 chr3L 22409984 22410038 9 115 3.5 2.5 3.0 2.2 169 chr3L 22409869 intergenic not near genes chr3L 22409954 intergenic not near genes chr3L 22410038 intergenic not near genes chr3L_9_22405001 chr3L_22405001 EF39_1-HE 2236 chr3L 22418837 22418887 chr3L 22418951 22419001 8 114 1.0 4.5 2.8 2.1 164 chr3L 22418837 intergenic not near genes chr3L 22418919 intergenic not near genes chr3L 22419001 intergenic not near genes chr3L_8_22415001 chr3L_22415001 EF39_1-HE 2237 chr3L 22435559 22435605 chr3L 22435661 22435707 21 102 7.0 5.5 6.2 2.9 148 chr3L 22435559 intergenic not near genes chr3L 22435633 intergenic not near genes chr3L 22435707 intergenic not near genes chr3L_21_22435001 chr3L_22435001 EF39_1-HE 2238 chr3L 22444391 22444436 chr3L 22444506 22444556 11 120 4.5 6.5 5.5 1.7 165 chr3L 22444391 intergenic not near genes chr3L 22444474 intergenic not near genes chr3L 22444556 intergenic not near genes chr3L_11_22440001 chr3L_22440001 EF39_1-HE 2239 chr3L 22445871 22446104 chr3L 22445986 22446238 18 121 5.0 5.0 5.0 3.0 367 chr3L 22445871 intergenic not near genes chr3L 22446054 intergenic not near genes chr3L 22446238 intergenic not near genes chr3L_18_22445001 chr3L_22445001 EF39_1-HE 2240 chr3L 22539860 22539906 chr3L 22540069 22540115 10 208 4.0 1.0 2.5 2.9 255 chr3L 22539860 intergenic not near genes chr3L 22539988 intergenic not near genes chr3L 22540115 intergenic not near genes chr3L_10_22535001 chr3L_22535001 EF39_1-HE 2241 chr3L 22540188 22540235 chr3L 22540306 22540353 12 117 2.5 3.0 2.8 3.2 165 chr3L 22540188 intergenic not near genes chr3L 22540270 intergenic not near genes chr3L 22540353 intergenic not near genes chr3L_12_22540001 chr3L_22540001 EF39_1-HE 2242 chr3L 22555744 22555800 chr3L 22563240 22563286 blood 14 7494 4.5 3.5 4.0 2.8 7542 chr3L 22555744 intergenic not near genes chr3L 22559515 intergenic not near genes chr3L 22563286 intergenic not near genes chr3L_14_22555001 chr3L_22555001 EF39_1-HE 2243 chr3L 22577601 22577644 chr3L 22582415 22582458 Doc 7 4814 5.5 5.0 5.2 1.1 4857 chr3L 22577601 intergenic not near genes chr3L 22580030 intergenic not near genes chr3L 22582458 3` UTR CG14459 - chr3L_7_22580001 chr3L_22580001 EF39_1-HE 2244 chr3L 22598872 22598924 chr3L 22598979 22599034 17 110 6.0 4.5 5.2 2.7 162 chr3L 22598872 intron CG14459 - chr3L 22598953 intron CG14459 - chr3L 22599034 intron CG14459 - chr3L_17_22595001 chr3L_22595001 EF39_1-HE 2245 chr3L 22617173 22617216 chr3L 22624651 22624691 blood 8 7478 1.0 2.5 1.8 2.9 7518 chr3L 22617173 intron CG14459 - chr3L 22620932 intron CG14459 - chr3L 22624691 intron CG14459 - chr3L_8_22620001 chr3L_22620001 EF39_1-HE 2246 chr3L 22629174 22629222 chr3L 22629299 22629347 17 124 5.0 2.0 3.5 3.8 173 chr3L 22629174 intron CG14459 - chr3L 22629260 intron CG14459 - chr3L 22629347 intron CG14459 - chr3L_17_22625001 chr3L_22625001 EF39_1-HE 2247 chr3L 22678053 22678082 chr3L 22678172 22678201 4 119 4.0 3.5 3.8 0.8 148 chr3L 22678053 intron CG14457 + chr3L 22678127 intron CG14457 + chr3L 22678201 intron CG14457 + chr3L_4_22675001 chr3L_22675001 EF39_1-HE 2248 chr3L 22705031 22705073 chr3L 22705137 22705179 6 106 2.0 1.0 1.5 2.4 148 chr3L 22705031 intergenic not near genes chr3L 22705105 intergenic not near genes chr3L 22705179 intergenic not near genes chr3L_6_22705001 chr3L_22705001 EF39_1-HE 2249 chr3L 22737783 22737831 chr3L 22737890 22737938 14 106 2.5 0.5 1.5 5.6 155 chr3L 22737783 intron CG11241 - chr3L 22737860 intron CG11241 - chr3L 22737938 intron CG11241 - chr3L_14_22735001 chr3L_22735001 EF39_1-HE 2250 chr3L 22761363 22761406 chr3L 22766823 22766866 Ivk 16 5460 8.5 6.5 7.5 1.9 5503 chr3L 22761363 intron SPoCk + chr3L 22764114 intron SPoCk + chr3L 22766866 intron SPoCk + chr3L_16_22760001 chr3L_22760001 EF39_1-HE 2251 chr3L 22773244 22773278 chr3L 22773350 22773384 12 106 6.0 6.0 6.0 1.7 140 chr3L 22773244 intron SPoCk + chr3L 22773314 intron SPoCk + chr3L 22773384 intron SPoCk + chr3L_12_22770001 chr3L_22770001 EF39_1-HE 2252 chr3L 22852245 22852294 chr3L 22852353 22852402 10 108 3.0 2.5 2.8 2.6 157 chr3L 22852245 intron CR43426 + chr3L 22852324 intron,3` UTR CR43426 +,CG32462 - chr3L 22852402 intron,exon CR43426 +,CG32462 - chr3L_10_22850001 chr3L_22850001 EF39_1-HE 2253 chr3L 22853889 22853933 chr3L 22854022 22854066 8 133 3.0 1.5 2.2 2.5 177 chr3L 22853889 5` UTR CR43426 + chr3L 22853978 5` UTR CR43426 + chr3L 22854066 5` UTR CR43426 + chr3L_8_22850001 chr3L_22850001 EF39_1-HE 2254 chr3L 22924921 22924976 chr3L 22925023 22925080 4 103 2.0 1.5 1.8 1.4 159 chr3L 22924921 intergenic not near genes chr3L 22925000 intergenic not near genes chr3L 22925080 intergenic not near genes chr3L_4_22925001 chr3L_22925001 EF39_1-HE 2255 chr3L 22926533 22926569 chr3L 22926639 22926674 4 106 4.0 3.0 3.5 0.9 141 chr3L 22926533 intergenic not near genes chr3L 22926604 intergenic not near genes chr3L 22926674 intergenic not near genes chr3L_4_22925001 chr3L_22925001 EF39_1-HE 2256 chr3L 22953297 22953352 chr3L 22953432 22953487 9 135 2.0 2.5 2.2 2.8 190 chr3L 22953297 intergenic not near genes chr3L 22953392 intergenic not near genes chr3L 22953487 intergenic not near genes chr3L_9_22950001 chr3L_22950001 EF39_1-HE 2257 chr3L 22965205 22965234 chr3L 22965563 22965591 15 358 9.5 8.5 9.0 1.5 386 chr3L 22965205 intergenic not near genes chr3L 22965398 intergenic not near genes chr3L 22965591 intergenic not near genes chr3L_15_22965001 chr3L_22965001 EF39_1-HE 2258 chr3L 22965237 22965264 chr3L 22965595 22965622 14 358 4.5 13.5 9.0 1.4 385 chr3L 22965237 intergenic not near genes chr3L 22965430 intergenic not near genes chr3L 22965622 intergenic not near genes chr3L_14_22965001 chr3L_22965001 EF39_1-HE 2259 chr3L 22975223 22975255 chr3L 22975340 22975372 16 117 7.0 6.0 6.5 2.1 149 chr3L 22975223 intergenic not near genes chr3L 22975298 intergenic not near genes chr3L 22975372 intergenic not near genes chr3L_16_22975001 chr3L_22975001 EF39_1-HE 2260 chr3L 22989839 22989894 chr3L 22996839 22996893 297 13 7000 3.0 2.0 2.5 3.7 7054 chr3L 22989839 intergenic not near genes chr3L 22993366 intergenic not near genes chr3L 22996893 intergenic not near genes chr3L_13_22990001 chr3L_22990001 EF39_1-HE 2261 chr3L 23468021 23468029 chr3L 23468162 23468170 4 141 18.5 16.0 17.2 0.2 149 chr3L 23468021 intergenic not near genes chr3L 23468096 intergenic not near genes chr3L 23468170 intergenic not near genes chr3L_4_23465001 chr3L_23465001 EF39_1-HE 2262 chr3L 23535517 23535538 chr3L 23535696 23535718 5 179 10.5 3.0 6.8 0.6 201 chr3L 23535517 intergenic not near genes chr3L 23535618 intergenic not near genes chr3L 23535718 intergenic not near genes chr3L_5_23535001 chr3L_23535001 EF39_1-HE 2263 chr3L 23535929 23535977 chr3L 23536037 23536085 12 107 1.5 4.0 2.8 3.2 156 chr3L 23535929 intergenic not near genes chr3L 23536007 intergenic not near genes chr3L 23536085 intergenic not near genes chr3L_12_23535001 chr3L_23535001 EF39_1-HE 2264 chr3L 23611208 23611226 chr3L 23613251 23613269 4 2043 9.5 9.5 9.5 0.4 2061 chr3L 23611208 intron AGO3 + chr3L 23612238 intron AGO3 + chr3L 23613269 intron AGO3 + chr3L_4_23610001 chr3L_23610001 EF39_1-HE 2265 chr3L 23665508 23665528 chr3L 23665624 23665644 gypsy8 24 116 21.0 22.0 21.5 1.1 136 chr3L 23665508 intron AGO3 + chr3L 23665576 intron AGO3 + chr3L 23665644 intron AGO3 + chr3L_24_23665001 chr3L_23665001 EF39_1-HE 2266 chr3L 23824003 23824035 chr3L 23824442 23824474 5 439 1.5 2.5 2.0 1.7 471 chr3L 23824003 intergenic not near genes chr3L 23824238 intergenic not near genes chr3L 23824474 intergenic not near genes chr3L_5_23820001 chr3L_23820001 EF39_1-HE 2267 chr3L 23848816 23848839 chr3L 23849666 23849689 R1A1-element 4 850 12.5 7.0 9.8 0.4 873 chr3L 23848816 intron CG40470 - chr3L 23849252 intron CG40470 - chr3L 23849689 intron CG40470 - chr3L_4_23845001 chr3L_23845001 EF39_1-HE 2268 chr3L 23940842 23940876 chr3L 23940948 23940982 6 106 2.5 1.5 2.0 2.0 140 chr3L 23940842 intron CG40470 - chr3L 23940912 intron CG40470 - chr3L 23940982 intron CG40470 - chr3L_6_23940001 chr3L_23940001 EF39_1-HE 2269 chr3L 24009640 24009686 chr3L 24009848 24009894 8 208 0.5 2.0 1.2 3.6 254 chr3L 24009640 intergenic CR40053 - chr3L 24009767 intergenic CR40053 - chr3L 24009894 intergenic CR40053 - chr3L_8_24005001 chr3L_24005001 EF39_1-HE 2270 chr3L 24012382 24012424 chr3L 24020749 24020791 roo 7 8367 1.5 0.5 1.0 3.5 8409 chr3L 24012382 intergenic not near genes chr3L 24016586 intergenic not near genes chr3L 24020791 intergenic not near genes chr3L_7_24015001 chr3L_24015001 EF39_1-HE 2271 chr3L 24168761 24168822 chr3L 24176115 24176175 ZAM 20 7354 2.0 3.5 2.8 5.3 7414 chr3L 24168761 intron Snap25 + chr3L 24172468 intron Snap25 + chr3L 24176175 intron Snap25 + chr3L_20_24170001 chr3L_24170001 EF39_1-HE 2272 chr3L 24363218 24363260 chr3L 24363322 24363364 12 104 4.5 4.0 4.2 2.3 146 chr3L 24363218 intron nvd + chr3L 24363291 intron nvd + chr3L 24363364 intron nvd + chr3L_12_24360001 chr3L_24360001 EF39_1-HE 2273 chr3L 24791877 24791901 chr3L 24796681 24796706 Doc 7 4805 5.0 2.0 3.5 1.6 4829 chr3L 24791877 intergenic not near genes chr3L 24794292 intergenic not near genes chr3L 24796706 intergenic not near genes chr3L_7_24790001 chr3L_24790001 EF39_1-HE 2274 chr3L 25331610 25331653 chr3L 25331727 25331769 9 115 6.0 9.0 7.5 1.1 159 chr3L 25331610 intergenic not near genes chr3L 25331690 intergenic not near genes chr3L 25331769 intergenic not near genes chr3L_9_25330001 chr3L_25330001 EF39_1-HE 2275 chr3L 25464012 25464049 chr3L 25464120 25464159 8 110 2.0 3.5 2.8 2.1 147 chr3L 25464012 intergenic not near genes chr3L 25464086 intergenic not near genes chr3L 25464159 intergenic not near genes chr3L_8_25460001 chr3L_25460001 EF39_1-HE 2276 chr3L 25512791 25512806 chr3L 25512889 25512910 6 103 9.5 9.5 9.5 0.6 119 chr3L 25512791 intron CG41343 - chr3L 25512850 intron CG41343 - chr3L 25512910 intron CG41343 - chr3L_6_25510001 chr3L_25510001 EF39_1-HE 2277 chr3L 25513554 25513567 chr3L 25513659 25513672 7 105 18.0 6.0 12.0 0.5 118 chr3L 25513554 intron CG41343 - chr3L 25513613 intron CG41343 - chr3L 25513672 intron CG41343 - chr3L_7_25510001 chr3L_25510001 EF39_1-HE 2278 chr3L 25513569 25513609 chr3L 25513655 25513714 23 102 8.5 5.0 6.8 2.9 145 chr3L 25513569 intron CG41343 - chr3L 25513642 intron CG41343 - chr3L 25513714 intron CG41343 - chr3L_23_25510001 chr3L_25510001 EF39_1-HE 2279 chr3L 25627821 25627827 chr3L 25627933 25627939 4 112 3.0 10.0 6.5 0.5 118 chr3L 25627821 intron CG41343 - chr3L 25627880 intron CG41343 - chr3L 25627939 intron CG41343 - chr3L_4_25625001 chr3L_25625001 EF39_1-HE 2280 chr3L 25628482 25628520 chr3L 25633279 25633317 F-element 11 4795 8.5 5.0 6.8 1.4 4835 chr3L 25628482 intron CG41343 - chr3L 25630900 intron CG41343 - chr3L 25633317 intron CG41343 - chr3L_11_25630001 chr3L_25630001 EF39_1-HE 2281 chr3L 25824653 25824658 chr3L 27273496 27273501 F-element 4 1448843 45.0 16.5 30.8 0.1 1448848 chr3L 25824653 intron CG40178 - chr3L 26549077 intergenic not near genes chr3L 27273501 intergenic not near genes chr3L_4_26545001 chr3L_26545001 EF39_1-HE 2282 chr3L 25842482 25842500 chr3L 25842594 25842612 8 112 5.5 12.5 9.0 0.8 130 chr3L 25842482 intron CG40178 - chr3L 25842547 intron CG40178 - chr3L 25842612 intron CG40178 - chr3L_8_25840001 chr3L_25840001 EF39_1-HE 2283 chr3L 26009398 26009454 chr3L 26009515 26009522 6 109 1.0 2.5 1.8 2.1 124 chr3L 26009398 intron CG40178 - chr3L 26009460 intron CG40178 - chr3L 26009522 intron CG40178 - chr3L_6_26005001 chr3L_26005001 EF39_1-HE 2284 chr3L 26694907 26694945 chr3L 26695013 26695051 12 106 3.5 1.5 2.5 3.4 144 chr3L 26694907 intergenic not near genes chr3L 26694979 intergenic not near genes chr3L 26695051 intergenic not near genes chr3L_12_26690001 chr3L_26690001 EF39_1-HE 2285 chr3L 27356094 27356100 chr3L 27357319 27357325 1360 4 1225 6.5 1.5 4.0 0.8 1231 chr3L 27356094 intron Dbp80 + chr3L 27356710 intron Dbp80 + chr3L 27357325 intron Dbp80 + chr3L_4_27355001 chr3L_27355001 EF39_1-HE 2286 chr3L 27368859 27368866 chr3L 27369430 27369437 4 570 9.0 1.0 5.0 0.7 578 chr3L 27368859 intron Dbp80 + chr3L 27369148 intron Dbp80 + chr3L 27369437 intron Dbp80 + chr3L_4_27365001 chr3L_27365001 EF39_1-HE 2287 chr3L 27368872 27368884 chr3L 27369443 27369455 4 571 6.5 1.5 4.0 0.8 583 chr3L 27368872 intron Dbp80 + chr3L 27369164 intron Dbp80 + chr3L 27369455 intron Dbp80 + chr3L_4_27365001 chr3L_27365001 EF39_1-HE 2288 chr3L 27390436 27390710 chr3L 27390683 27390815 16 114 55.5 59.0 57.2 0.3 379 chr3L 27390436 intron Dbp80 + chr3L 27390626 intron Dbp80 + chr3L 27390815 intron Dbp80 + chr3L_16_27390001 chr3L_27390001 EF39_1-HE 2289 chr3R 1062361 1062415 chr3R 1062545 1062599 15 184 1.5 4.5 3.0 3.8 238 chr3R 1062361 intron CG15831 + chr3R 1062480 intron CG15831 + chr3R 1062599 intron CG15831 + chr3R_15_1060001 chr3R_1060001 EF39_1-HE 2290 chr3R 1443409 1443456 chr3R 1443510 1443562 10 102 7.5 5.5 6.5 1.3 153 chr3R 1443409 intron CG40155 + chr3R 1443486 intron CG40155 + chr3R 1443562 intron CG40155 + chr3R_10_1440001 chr3R_1440001 EF39_1-HE 2291 chr3R 1521173 1521181 chr3R 1521287 1521295 4 114 6.5 4.5 5.5 0.6 122 chr3R 1521173 intergenic not near genes chr3R 1521234 intergenic not near genes chr3R 1521295 intergenic not near genes chr3R_4_1520001 chr3R_1520001 EF39_1-HE 2292 chr3R 1861058 1861096 chr3R 1861183 1861221 8 124 2.0 4.0 3.0 2.0 163 chr3R 1861058 intron CG42623 + chr3R 1861140 intron CG42623 + chr3R 1861221 exon CG42623 + chr3R_8_1860001 chr3R_1860001 EF39_1-HE 2293 chr3R 2534112 2534159 chr3R 2541707 2541748 19 7595 45.0 13.5 29.2 0.6 7636 chr3R 2534112 intergenic not near genes chr3R 2537930 intergenic not near genes chr3R 2541748 intergenic not near genes chr3R_19_2535001 chr3R_2535001 EF39_1-HE 2294 chr3R 3737873 3737924 chr3R 3737983 3738033 10 110 1.5 2.0 1.8 3.6 160 chr3R 3737873 intron Tim17b + chr3R 3737953 intron Tim17b + chr3R 3738033 intron Tim17b + chr3R_10_3735001 chr3R_3735001 EF39_1-HE 2295 chr3R 3915268 3915320 chr3R 3915595 3915647 8 327 1.5 2.5 2.0 2.7 379 chr3R 3915268 intergenic not near genes chr3R 3915458 intergenic not near genes chr3R 3915647 intergenic not near genes chr3R_8_3915001 chr3R_3915001 EF39_1-HE 2296 chr3R 4063784 4063803 chr3R 4069090 4069109 4 5306 11.5 16.0 13.8 0.3 5325 chr3R 4063784 intergenic not near genes chr3R 4066446 intergenic not near genes chr3R 4069109 intergenic not near genes chr3R_4_4065001 chr3R_4065001 EF39_1-HE 2297 chr3R 4065081 4065123 chr3R 4065319 4065361 8 238 2.0 3.0 2.5 2.3 280 chr3R 4065081 intergenic not near genes chr3R 4065221 intergenic not near genes chr3R 4065361 intergenic not near genes chr3R_8_4065001 chr3R_4065001 EF39_1-HE 2298 chr3R 4206060 4206101 chr3R 4211661 4211702 mdg3 7 5601 2.0 2.5 2.2 2.2 5642 chr3R 4206060 intron CG14636 - chr3R 4208881 intron CG14636 - chr3R 4211702 intron CG14636 - chr3R_7_4205001 chr3R_4205001 EF39_1-HE 2299 chr3R 4230039 4230073 chr3R 4230150 4230184 4 111 0.5 3.0 1.8 1.4 145 chr3R 4230039 intergenic not near genes chr3R 4230112 intergenic not near genes chr3R 4230184 intergenic not near genes chr3R_4_4230001 chr3R_4230001 EF39_1-HE 2300 chr3R 4237355 4237407 chr3R 4237464 4237516 9 108 5.0 1.5 3.2 2.1 161 chr3R 4237355 intron Gel + chr3R 4237436 intron Gel + chr3R 4237516 intron Gel + chr3R_9_4235001 chr3R_4235001 EF39_1-HE 2301 chr3R 4366738 4366787 chr3R 4375147 4375193 roo 16 8409 5.5 3.5 4.5 2.9 8455 chr3R 4366738 3` UTR CG1090 + chr3R 4370966 intergenic not near genes chr3R 4375193 5` UTR CR44922 + chr3R_16_4370001 chr3R_4370001 EF39_1-HE 2302 chr3R 4408388 4408425 chr3R 4412718 4412722 Juan 7 4325 4.5 4.0 4.2 1.3 4334 chr3R 4408388 intron CG32944 - chr3R 4410555 intron CG32944 - chr3R 4412722 intron CG32944 - chr3R_7_4410001 chr3R_4410001 EF39_1-HE 2303 chr3R 4480044 4480055 chr3R 4480171 4480182 4 127 3.5 9.0 6.2 0.6 138 chr3R 4480044 intergenic not near genes chr3R 4480113 intergenic not near genes chr3R 4480182 intergenic not near genes chr3R_4_4480001 chr3R_4480001 EF39_1-HE 2304 chr3R 4598749 4598790 chr3R 4602747 4602801 18 3999 33.0 28.5 30.8 0.6 4052 chr3R 4598749 intron CR44317 - chr3R 4600775 intergenic not near genes chr3R 4602801 intergenic not near genes chr3R_18_4600001 chr3R_4600001 EF39_1-HE 2305 chr3R 4606743 4606762 chr3R 4607118 4607137 6 375 5.0 2.5 3.8 1.2 394 chr3R 4606743 intergenic not near genes chr3R 4606940 intergenic not near genes chr3R 4607137 intergenic not near genes chr3R_6_4605001 chr3R_4605001 EF39_1-HE 2306 chr3R 4609523 4609578 chr3R 4610713 4610768 1360 13 1188 3.5 5.0 4.2 2.5 1245 chr3R 4609523 intergenic not near genes chr3R 4610146 intergenic not near genes chr3R 4610768 intergenic not near genes chr3R_13_4610001 chr3R_4610001 EF39_1-HE 2307 chr3R 4623602 4623656 chr3R 4623734 4623788 13 132 5.5 5.0 5.2 2.1 186 chr3R 4623602 exon 5-HT2A + chr3R 4623695 intron 5-HT2A + chr3R 4623788 intron 5-HT2A + chr3R_13_4620001 chr3R_4620001 EF39_1-HE 2308 chr3R 4753225 4753263 chr3R 4757554 4757591 F-element 10 4329 5.0 6.5 5.8 1.5 4366 chr3R 4753225 intron,intron atms +,CG44098 - chr3R 4755408 intron,intron atms +,CG44098 - chr3R 4757591 intron,exon atms +,CG44098 - chr3R_10_4755001 chr3R_4755001 EF39_1-HE 2309 chr3R 4759702 4759744 chr3R 4761225 4761260 hopper2 6 1522 3.5 5.0 4.2 1.2 1558 chr3R 4759702 intron,intron atms +,CG44098 - chr3R 4760481 intron,intron atms +,CG44098 - chr3R 4761260 intron,intron atms +,CG44098 - chr3R_6_4760001 chr3R_4760001 EF39_1-HE 2310 chr3R 4763819 4763866 chr3R 4763939 4763986 14 120 7.0 6.5 6.8 1.8 167 chr3R 4763819 intron,intron atms +,CG44098 - chr3R 4763902 intron,intron atms +,CG44098 - chr3R 4763986 intron,intron atms +,CG44098 - chr3R_14_4760001 chr3R_4760001 EF39_1-HE 2311 chr3R 4769137 4769191 chr3R 4769241 4769295 16 103 3.5 3.0 3.2 3.8 158 chr3R 4769137 intron,intron atms +,CG44098 - chr3R 4769216 intron,intron atms +,CG44098 - chr3R 4769295 intron,intron atms +,CG44098 - chr3R_16_4765001 chr3R_4765001 EF39_1-HE 2312 chr3R 4785650 4785680 chr3R 4785752 4785782 6 102 1.5 3.0 2.2 1.9 132 chr3R 4785650 intergenic not near genes chr3R 4785716 intergenic not near genes chr3R 4785782 intergenic not near genes chr3R_6_4785001 chr3R_4785001 EF39_1-HE 2313 chr3R 4858827 4858884 chr3R 4859095 4859147 9 267 1.0 2.0 1.5 3.6 320 chr3R 4858827 intron opa + chr3R 4858987 intron opa + chr3R 4859147 intron opa + chr3R_9_4855001 chr3R_4855001 EF39_1-HE 2314 chr3R 4861540 4861597 chr3R 4861647 4861704 11 106 4.0 4.0 4.0 2.2 164 chr3R 4861540 intron opa + chr3R 4861622 intron opa + chr3R 4861704 intron opa + chr3R_11_4860001 chr3R_4860001 EF39_1-HE 2315 chr3R 4871054 4871062 chr3R 4871160 4871168 5 106 6.5 5.0 5.8 0.7 114 chr3R 4871054 intergenic not near genes chr3R 4871111 intergenic not near genes chr3R 4871168 intergenic not near genes chr3R_5_4870001 chr3R_4870001 EF39_1-HE 2316 chr3R 4871063 4871086 chr3R 4871157 4871192 7 104 5.0 4.5 4.8 1.2 129 chr3R 4871063 intergenic not near genes chr3R 4871128 intergenic not near genes chr3R 4871192 intergenic not near genes chr3R_7_4870001 chr3R_4870001 EF39_1-HE 2317 chr3R 4887451 4887502 chr3R 4894854 4894905 rover 15 7400 5.0 3.0 4.0 3.0 7454 chr3R 4887451 intergenic not near genes chr3R 4891178 intergenic not near genes chr3R 4894905 intergenic not near genes chr3R_15_4890001 chr3R_4890001 EF39_1-HE 2318 chr3R 4948379 4948392 chr3R 4949027 4949040 4 648 6.5 15.5 11.0 0.3 661 chr3R 4948379 intergenic snRNA:U1:82Eb -,UbcD6 - chr3R 4948710 intergenic UbcD6 - chr3R 4949040 3` UTR UbcD6 - chr3R_4_4945001 chr3R_4945001 EF39_1-HE 2319 chr3R 4965993 4966034 chr3R 4966111 4966152 10 118 4.5 5.0 4.8 1.7 159 chr3R 4965993 intron CG1124 + chr3R 4966072 intron CG1124 + chr3R 4966152 intron CG1124 + chr3R_10_4965001 chr3R_4965001 EF39_1-HE 2320 chr3R 5045841 5045871 chr3R 5052969 5052999 HMS-Beagle 5 7128 2.5 6.0 4.2 1.0 7158 chr3R 5045841 intron CR43635 - chr3R 5049420 intergenic not near genes chr3R 5052999 intergenic CR45588 - chr3R_5_5045001 chr3R_5045001 EF39_1-HE 2321 chr3R 5067964 5068010 chr3R 5073507 5073553 mdg3 21 5543 3.0 7.0 5.0 3.5 5589 chr3R 5067964 intergenic not near genes chr3R 5070758 intergenic not near genes chr3R 5073553 intergenic not near genes chr3R_21_5070001 chr3R_5070001 EF39_1-HE 2322 chr3R 5104363 5104417 chr3R 5104695 5104749 20 332 4.5 2.5 3.5 4.4 386 chr3R 5104363 intergenic not near genes chr3R 5104556 intergenic not near genes chr3R 5104749 intergenic not near genes chr3R_20_5100001 chr3R_5100001 EF39_1-HE 2323 chr3R 5124053 5124111 chr3R 5124176 5124234 17 122 4.5 3.0 3.8 3.5 181 chr3R 5124053 intergenic not near genes chr3R 5124144 intergenic not near genes chr3R 5124234 intergenic not near genes chr3R_17_5120001 chr3R_5120001 EF39_1-HE 2324 chr3R 5278069 5278117 chr3R 5278176 5278224 8 107 2.5 3.0 2.8 2.1 155 chr3R 5278069 intron mtd - chr3R 5278146 intron mtd - chr3R 5278224 intron mtd - chr3R_8_5275001 chr3R_5275001 EF39_1-HE 2325 chr3R 5326921 5326927 chr3R 5327018 5327030 4 102 1.0 1.0 1.0 2.0 109 chr3R 5326921 intron mtd - chr3R 5326976 intron mtd - chr3R 5327030 intron mtd - chr3R_4_5325001 chr3R_5325001 EF39_1-HE 2326 chr3R 5338375 5338422 chr3R 5343578 5343603 Rt1c 15 5201 8.0 6.5 7.2 1.8 5228 chr3R 5338375 intron mtd - chr3R 5340989 intron mtd - chr3R 5343603 intron mtd - chr3R_15_5340001 chr3R_5340001 EF39_1-HE 2327 chr3R 5445947 5445987 chr3R 5452433 5452472 Burdock 10 6486 2.0 2.5 2.2 3.1 6525 chr3R 5445947 intron CG14669 + chr3R 5449210 intron CG14669 + chr3R 5452472 intron CG14669 + chr3R_10_5445001 chr3R_5445001 EF39_1-HE 2328 chr3R 5554931 5554935 chr3R 5554995 5555042 4 96 2.5 1.5 2.0 1.3 111 chr3R 5554931 intergenic Snm1 + chr3R 5554986 intergenic Snm1 + chr3R 5555042 intergenic Snm1 + chr3R_4_5550001 chr3R_5550001 EF39_1-HE 2329 chr3R 5573124 5573182 chr3R 5573235 5573293 10 111 2.5 6.5 4.5 1.8 169 chr3R 5573124 intron CRMP + chr3R 5573208 intron CRMP + chr3R 5573293 intron CRMP + chr3R_10_5570001 chr3R_5570001 EF39_1-HE 2330 chr3R 5626994 5627035 chr3R 5627136 5627177 6 138 2.5 2.5 2.5 1.7 183 chr3R 5626994 intergenic not near genes chr3R 5627086 intergenic not near genes chr3R 5627177 intergenic not near genes chr3R_6_5625001 chr3R_5625001 EF39_1-HE 2331 chr3R 5696132 5696140 chr3R 5696254 5696262 4 122 1.0 6.0 3.5 0.9 130 chr3R 5696132 intron plx + chr3R 5696197 intron plx + chr3R 5696262 intron plx + chr3R_4_5695001 chr3R_5695001 EF39_1-HE 2332 chr3R 5789008 5789063 chr3R 5789114 5789169 11 106 1.0 3.0 2.0 3.7 161 chr3R 5789008 intron CG2051 - chr3R 5789088 intron CG2051 - chr3R 5789169 intron CG2051 - chr3R_11_5785001 chr3R_5785001 EF39_1-HE 2333 chr3R 5809086 5809142 chr3R 5809353 5809409 pogo 17 266 3.5 2.5 3.0 4.2 323 chr3R 5809086 3` UTR CG11000 + chr3R 5809248 3` UTR CG11000 + chr3R 5809409 3` UTR CG11000 + chr3R_17_5805001 chr3R_5805001 EF39_1-HE 2334 chr3R 5822360 5822406 chr3R 5823552 5823599 1360 14 1193 3.0 1.0 2.0 4.7 1239 chr3R 5822360 3` UTR CG2023 - chr3R 5822980 3` UTR CG2023 - chr3R 5823599 3` UTR CG2023 - chr3R_14_5820001 chr3R_5820001 EF39_1-HE 2335 chr3R 5872763 5872818 chr3R 5872882 5872937 18 118 2.5 4.5 3.5 4.0 174 chr3R 5872763 intron CG34113 - chr3R 5872850 intron CG34113 - chr3R 5872937 intron CG34113 - chr3R_18_5870001 chr3R_5870001 EF39_1-HE 2336 chr3R 5896945 5896997 chr3R 5897330 5897382 27 384 8.5 7.5 8.0 3.0 437 chr3R 5896945 intron CG34113 - chr3R 5897164 intron CG34113 - chr3R 5897382 intron CG34113 - chr3R_27_5895001 chr3R_5895001 EF39_1-HE 2337 chr3R 5925947 5925984 chr3R 5926149 5926186 12 202 6.5 5.5 6.0 1.7 239 chr3R 5925947 intron CG34113 - chr3R 5926066 intron CG34113 - chr3R 5926186 intron CG34113 - chr3R_12_5925001 chr3R_5925001 EF39_1-HE 2338 chr3R 5927542 5927590 chr3R 5927808 5927856 pogo 10 263 3.5 5.5 4.5 1.8 314 chr3R 5927542 intron CG34113 - chr3R 5927699 intron CG34113 - chr3R 5927856 intron CG34113 - chr3R_10_5925001 chr3R_5925001 EF39_1-HE 2339 chr3R 5931438 5931458 chr3R 5931552 5931571 6 114 4.0 8.0 6.0 0.9 133 chr3R 5931438 intron CG34113 - chr3R 5931504 intron CG34113 - chr3R 5931571 intron CG34113 - chr3R_6_5930001 chr3R_5930001 EF39_1-HE 2340 chr3R 5935690 5935732 chr3R 5935783 5935834 10 101 5.0 7.0 6.0 1.4 144 chr3R 5935690 intron CG34113 - chr3R 5935762 intron CG34113 - chr3R 5935834 intron CG34113 - chr3R_10_5935001 chr3R_5935001 EF39_1-HE 2341 chr3R 5998417 5998460 chr3R 5998979 5999015 19 562 3.5 4.0 3.8 4.0 598 chr3R 5998417 intergenic not near genes chr3R 5998716 intergenic not near genes chr3R 5999015 intergenic not near genes chr3R_19_5995001 chr3R_5995001 EF39_1-HE 2342 chr3R 6015939 6015990 chr3R 6024446 6024494 Tirant 20 8507 5.0 5.0 5.0 3.3 8555 chr3R 6015939 intergenic not near genes chr3R 6020216 intergenic not near genes chr3R 6024494 intergenic not near genes chr3R_20_6020001 chr3R_6020001 EF39_1-HE 2343 chr3R 6043393 6043449 chr3R 6043501 6043557 18 108 3.0 2.5 2.8 4.7 164 chr3R 6043393 intergenic not near genes chr3R 6043475 intergenic not near genes chr3R 6043557 intergenic not near genes chr3R_18_6040001 chr3R_6040001 EF39_1-HE 2344 chr3R 6090856 6090889 chr3R 6090966 6090999 9 110 1.0 3.5 2.2 2.8 143 chr3R 6090856 intron Gasp - chr3R 6090928 intron Gasp - chr3R 6090999 intron Gasp - chr3R_9_6090001 chr3R_6090001 EF39_1-HE 2345 chr3R 6112706 6112755 chr3R 6112833 6112875 23 121 0.5 9.5 5.0 3.8 169 chr3R 6112706 intergenic Obp83g - chr3R 6112790 intergenic Obp83g - chr3R 6112875 intergenic not near genes chr3R_23_6110001 chr3R_6110001 EF39_1-HE 2346 chr3R 6115493 6115534 chr3R 6115604 6115645 22 111 7.0 4.5 5.8 3.2 152 chr3R 6115493 intergenic not near genes chr3R 6115569 intergenic not near genes chr3R 6115645 intergenic not near genes chr3R_22_6115001 chr3R_6115001 EF39_1-HE 2347 chr3R 6121165 6121180 chr3R 6121409 6121424 BS 8 243 0.0 10.0 5.0 1.3 259 chr3R 6121165 intergenic not near genes chr3R 6121294 intergenic not near genes chr3R 6121424 intergenic not near genes chr3R_8_6120001 chr3R_6120001 EF39_1-HE 2348 chr3R 6127214 6127255 chr3R 6127329 6127370 21 113 0.5 7.0 3.8 4.4 156 chr3R 6127214 intergenic CR43487 -,CR43486 - chr3R 6127292 3` UTR CR43487 - chr3R 6127370 3` UTR CR43487 - chr3R_21_6125001 chr3R_6125001 EF39_1-HE 2349 chr3R 6145187 6145236 chr3R 6145381 6145417 10 191 1.0 2.5 1.8 3.6 230 chr3R 6145187 intergenic not near genes chr3R 6145302 intergenic not near genes chr3R 6145417 intergenic not near genes chr3R_10_6145001 chr3R_6145001 EF39_1-HE 2350 chr3R 6158487 6158527 chr3R 6167096 6167136 Tirant 14 8608 6.0 4.5 5.2 2.3 8649 chr3R 6158487 intergenic not near genes chr3R 6162812 intergenic not near genes chr3R 6167136 intergenic CG1077 + chr3R_14_6160001 chr3R_6160001 EF39_1-HE 2351 chr3R 6206264 6206301 chr3R 6206507 6206544 BS 8 242 5.5 4.0 4.8 1.4 280 chr3R 6206264 exon Osi24 + chr3R 6206404 intron Osi24 + chr3R 6206544 intron Osi24 + chr3R_8_6205001 chr3R_6205001 EF39_1-HE 2352 chr3R 6286507 6286554 chr3R 6286609 6286656 7 102 4.5 4.0 4.2 1.3 149 chr3R 6286507 intergenic not near genes chr3R 6286582 intergenic not near genes chr3R 6286656 intergenic not near genes chr3R_7_6285001 chr3R_6285001 EF39_1-HE 2353 chr3R 6303977 6304030 chr3R 6304087 6304140 14 110 3.5 4.5 4.0 2.8 163 chr3R 6303977 intergenic Osi15 + chr3R 6304058 intergenic Osi15 + chr3R 6304140 intergenic Osi15 + chr3R_14_6300001 chr3R_6300001 EF39_1-HE 2354 chr3R 6461553 6461612 chr3R 6461660 6461718 6 106 2.5 4.5 3.5 1.3 165 chr3R 6461553 intergenic not near genes chr3R 6461636 intergenic not near genes chr3R 6461718 intergenic not near genes chr3R_6_6460001 chr3R_6460001 EF39_1-HE 2355 chr3R 6510003 6510049 chr3R 6515110 6515156 jockey 8 5107 3.0 2.0 2.5 2.3 5153 chr3R 6510003 intergenic not near genes chr3R 6512580 intergenic not near genes chr3R 6515156 intergenic not near genes chr3R_8_6510001 chr3R_6510001 EF39_1-HE 2356 chr3R 6523318 6523347 chr3R 6523720 6523749 10 402 0.5 5.0 2.8 2.6 431 chr3R 6523318 intergenic not near genes chr3R 6523534 intergenic not near genes chr3R 6523749 intergenic not near genes chr3R_10_6520001 chr3R_6520001 EF39_1-HE 2357 chr3R 6532081 6532133 chr3R 6532481 6532533 15 400 4.5 3.5 4.0 3.0 452 chr3R 6532081 intron dpr11 - chr3R 6532307 intron dpr11 - chr3R 6532533 intron dpr11 - chr3R_15_6530001 chr3R_6530001 EF39_1-HE 2358 chr3R 6596106 6596156 chr3R 6596209 6596259 12 103 5.0 1.5 3.2 2.9 153 chr3R 6596106 intergenic not near genes chr3R 6596182 intergenic CG1138 - chr3R 6596259 intergenic CG1138 - chr3R_12_6595001 chr3R_6595001 EF39_1-HE 2359 chr3R 6616378 6616426 chr3R 6616524 6616559 15 149 3.0 0.5 1.8 5.4 181 chr3R 6616378 intergenic not near genes chr3R 6616468 intergenic not near genes chr3R 6616559 intergenic not near genes chr3R_15_6615001 chr3R_6615001 EF39_1-HE 2360 chr3R 6639885 6639903 chr3R 6639989 6640007 4 104 7.0 0.0 3.5 0.9 122 chr3R 6639885 intergenic not near genes chr3R 6639946 intergenic not near genes chr3R 6640007 intergenic not near genes chr3R_4_6635001 chr3R_6635001 EF39_1-HE 2361 chr3R 6689335 6689365 chr3R 6689443 6689473 8 108 2.5 3.0 2.8 2.1 138 chr3R 6689335 intergenic Ccp84Af - chr3R 6689404 intergenic Ccp84Af - chr3R 6689473 intergenic Ccp84Af - chr3R_8_6685001 chr3R_6685001 EF39_1-HE 2362 chr3R 6693968 6694009 chr3R 6694088 6694129 6 120 2.0 1.5 1.8 2.1 161 chr3R 6693968 intergenic Ccp84Ad + chr3R 6694048 intergenic not near genes chr3R 6694129 intergenic not near genes chr3R_6_6690001 chr3R_6690001 EF39_1-HE 2363 chr3R 6705679 6705706 chr3R 6705929 6705956 7 250 0.0 3.5 1.8 2.5 277 chr3R 6705679 intergenic not near genes chr3R 6705818 intergenic not near genes chr3R 6705956 intergenic not near genes chr3R_7_6705001 chr3R_6705001 EF39_1-HE 2364 chr3R 6725148 6725189 chr3R 6725309 6725350 14 161 6.5 8.5 7.5 1.6 202 chr3R 6725148 intron pb - chr3R 6725249 intron pb - chr3R 6725350 intron pb - chr3R_14_6725001 chr3R_6725001 EF39_1-HE 2365 chr3R 6737481 6737484 chr3R 6739293 6739297 Doc 4 1813 10.0 6.5 8.2 0.4 1816 chr3R 6737481 intron pb - chr3R 6738389 intron pb - chr3R 6739297 intron pb - chr3R_4_6735001 chr3R_6735001 EF39_1-HE 2366 chr3R 6737486 6737529 chr3R 6739286 6739342 Doc 10 1810 2.0 5.0 3.5 2.2 1856 chr3R 6737486 intron pb - chr3R 6738414 intron pb - chr3R 6739342 intron pb - chr3R_10_6735001 chr3R_6735001 EF39_1-HE 2367 chr3R 6780427 6780480 chr3R 6780536 6780589 11 109 3.5 7.0 5.2 1.8 162 chr3R 6780427 intergenic not near genes chr3R 6780508 intergenic not near genes chr3R 6780589 intergenic not near genes chr3R_11_6780001 chr3R_6780001 EF39_1-HE 2368 chr3R 6782415 6782467 chr3R 6782520 6782572 10 105 6.5 8.0 7.2 1.2 157 chr3R 6782415 intergenic not near genes chr3R 6782494 intergenic not near genes chr3R 6782572 intergenic not near genes chr3R_10_6780001 chr3R_6780001 EF39_1-HE 2369 chr3R 6803739 6803745 chr3R 6803841 6803847 5 102 0.0 2.5 1.2 2.3 108 chr3R 6803739 intergenic not near genes chr3R 6803793 intergenic not near genes chr3R 6803847 intergenic not near genes chr3R_5_6800001 chr3R_6800001 EF39_1-HE 2370 chr3R 6856362 6856399 chr3R 6856505 6856542 11 143 3.5 5.0 4.2 2.1 180 chr3R 6856362 intergenic not near genes chr3R 6856452 intergenic not near genes chr3R 6856542 intergenic not near genes chr3R_11_6855001 chr3R_6855001 EF39_1-HE 2371 chr3R 6890182 6890237 chr3R 6890394 6890449 17 212 0.5 5.5 3.0 4.2 267 chr3R 6890182 intergenic not near genes chr3R 6890316 intergenic not near genes chr3R 6890449 intergenic not near genes chr3R_17_6890001 chr3R_6890001 EF39_1-HE 2372 chr3R 6941818 6941873 chr3R 6941925 6941980 22 106 9.0 6.0 7.5 2.6 162 chr3R 6941818 intron Antp - chr3R 6941899 intron Antp - chr3R 6941980 intron Antp - chr3R_22_6940001 chr3R_6940001 EF39_1-HE 2373 chr3R 6958900 6958952 chr3R 6959137 6959189 23 236 1.5 5.0 3.2 5.5 289 chr3R 6958900 intron Antp - chr3R 6959044 intron Antp - chr3R 6959189 intron Antp - chr3R_23_6955001 chr3R_6955001 EF39_1-HE 2374 chr3R 6961164 6961195 chr3R 6961269 6961300 6 105 5.5 11.5 8.5 0.6 136 chr3R 6961164 intron Antp - chr3R 6961232 intron Antp - chr3R 6961300 intron Antp - chr3R_6_6960001 chr3R_6960001 EF39_1-HE 2375 chr3R 7008711 7008762 chr3R 7008828 7008879 10 117 9.5 4.5 7.0 1.2 168 chr3R 7008711 intergenic not near genes chr3R 7008795 intergenic not near genes chr3R 7008879 intergenic not near genes chr3R_10_7005001 chr3R_7005001 EF39_1-HE 2376 chr3R 7047718 7047762 chr3R 7047829 7047873 10 111 5.5 4.5 5.0 1.7 155 chr3R 7047718 intergenic not near genes chr3R 7047796 intergenic not near genes chr3R 7047873 intergenic not near genes chr3R_10_7045001 chr3R_7045001 EF39_1-HE 2377 chr3R 7103913 7103962 chr3R 7104038 7104087 14 125 4.0 4.0 4.0 2.8 174 chr3R 7103913 intron Alh - chr3R 7104000 intron Alh - chr3R 7104087 intron Alh - chr3R_14_7100001 chr3R_7100001 EF39_1-HE 2378 chr3R 7173661 7173707 chr3R 7173767 7173813 20 105 4.5 5.0 4.8 3.4 152 chr3R 7173661 intron sas + chr3R 7173737 intron sas + chr3R 7173813 intron sas + chr3R_20_7170001 chr3R_7170001 EF39_1-HE 2379 chr3R 7180727 7180778 chr3R 7184215 7184266 24 3489 59.0 35.0 47.0 0.5 3539 chr3R 7180727 intron sas + chr3R 7182496 exon sas + chr3R 7184266 3` UTR CG10055 - chr3R_24_7180001 chr3R_7180001 EF39_1-HE 2380 chr3R 7290676 7290724 chr3R 7290784 7290832 16 108 5.5 1.5 3.5 3.6 156 chr3R 7290676 intron rn - chr3R 7290754 intron rn - chr3R 7290832 intron rn - chr3R_16_7290001 chr3R_7290001 EF39_1-HE 2381 chr3R 7331952 7331991 chr3R 7332058 7332097 15 106 8.0 6.0 7.0 1.9 145 chr3R 7331952 5` UTR CR44337 + chr3R 7332024 intergenic CR44337 + chr3R 7332097 intergenic CR44337 + chr3R_15_7330001 chr3R_7330001 EF39_1-HE 2382 chr3R 7355466 7355477 chr3R 7355577 7355588 5 111 0.0 6.0 3.0 1.2 122 chr3R 7355466 intergenic not near genes chr3R 7355527 intergenic not near genes chr3R 7355588 intergenic not near genes chr3R_5_7355001 chr3R_7355001 EF39_1-HE 2383 chr3R 7386981 7386998 chr3R 7387108 7387126 7 128 5.5 3.0 4.2 1.3 145 chr3R 7386981 intergenic CR45560 + chr3R 7387054 intergenic CR45560 + chr3R 7387126 intergenic CR45560 + chr3R_7_7385001 chr3R_7385001 EF39_1-HE 2384 chr3R 7396348 7396370 chr3R 7396477 7396499 4 129 4.0 4.0 4.0 0.8 151 chr3R 7396348 intergenic not near genes chr3R 7396424 intergenic not near genes chr3R 7396499 intergenic not near genes chr3R_4_7395001 chr3R_7395001 EF39_1-HE 2385 chr3R 7428695 7428748 chr3R 7428898 7428950 10 202 3.0 0.5 1.8 3.6 255 chr3R 7428695 intergenic not near genes chr3R 7428822 intergenic not near genes chr3R 7428950 intergenic not near genes chr3R_10_7425001 chr3R_7425001 EF39_1-HE 2386 chr3R 7447965 7447981 chr3R 7448069 7448085 5 104 5.5 3.5 4.5 0.9 120 chr3R 7447965 intergenic not near genes chr3R 7448025 intergenic not near genes chr3R 7448085 intergenic not near genes chr3R_5_7445001 chr3R_7445001 EF39_1-HE 2387 chr3R 7526263 7526319 chr3R 7526371 7526427 18 108 5.0 4.0 4.5 3.3 164 chr3R 7526263 intron alpha-Est6 - chr3R 7526345 intron alpha-Est6 - chr3R 7526427 intron alpha-Est6 - chr3R_18_7525001 chr3R_7525001 EF39_1-HE 2388 chr3R 7550733 7550785 chr3R 7550838 7550890 15 103 1.0 3.5 2.2 4.7 157 chr3R 7550733 intergenic not near genes chr3R 7550812 intergenic not near genes chr3R 7550890 intergenic not near genes chr3R_15_7550001 chr3R_7550001 EF39_1-HE 2389 chr3R 7621503 7621559 chr3R 7621619 7621675 10 116 3.5 4.0 3.8 2.1 172 chr3R 7621503 intron CG34127 - chr3R 7621589 intron CG34127 - chr3R 7621675 intron CG34127 - chr3R_10_7620001 chr3R_7620001 EF39_1-HE 2390 chr3R 7677888 7677943 chr3R 7678027 7678082 11 139 2.5 2.0 2.2 3.4 194 chr3R 7677888 intron Nlg1 + chr3R 7677985 intron Nlg1 + chr3R 7678082 intron Nlg1 + chr3R_11_7675001 chr3R_7675001 EF39_1-HE 2391 chr3R 7694554 7694604 chr3R 7713641 7713691 invader3 9 19087 3.5 4.0 3.8 1.9 19137 chr3R 7694554 3` UTR Nlg1 + chr3R 7704122 intergenic not near genes chr3R 7713691 intergenic not near genes chr3R_9_7700001 chr3R_7700001 EF39_1-HE 2392 chr3R 7721451 7721488 chr3R 7721554 7721591 8 103 2.5 2.5 2.5 2.3 140 chr3R 7721451 intergenic CR44260 + chr3R 7721521 intergenic CR44260 + chr3R 7721591 intergenic CR44260 + chr3R_8_7720001 chr3R_7720001 EF39_1-HE 2393 chr3R 7729446 7729493 chr3R 7737410 7737457 Stalker2 25 7963 8.5 5.0 6.8 3.2 8011 chr3R 7729446 intergenic not near genes chr3R 7733452 intergenic not near genes chr3R 7737457 intergenic not near genes chr3R_25_7730001 chr3R_7730001 EF39_1-HE 2394 chr3R 7849622 7849676 chr3R 7850815 7850857 1360 5 1191 0.5 1.5 1.0 2.5 1235 chr3R 7849622 intron CG34384 + chr3R 7850240 intron CG34384 + chr3R 7850857 intron CG34384 + chr3R_5_7850001 chr3R_7850001 EF39_1-HE 2395 chr3R 7883109 7883142 chr3R 7883213 7883246 8 103 8.5 8.0 8.2 0.9 137 chr3R 7883109 intron CG17816 - chr3R 7883178 intron CG17816 - chr3R 7883246 intron CG17816 - chr3R_8_7880001 chr3R_7880001 EF39_1-HE 2396 chr3R 7947661 7947705 chr3R 7948007 7948056 10 350 3.5 4.0 3.8 2.1 395 chr3R 7947661 intron dsx - chr3R 7947858 intron dsx - chr3R 7948056 intron dsx - chr3R_10_7945001 chr3R_7945001 EF39_1-HE 2397 chr3R 7963924 7963960 chr3R 7964093 7964129 6 168 3.5 6.0 4.8 1.0 205 chr3R 7963924 intron dsx - chr3R 7964026 intron dsx - chr3R 7964129 intron dsx - chr3R_6_7960001 chr3R_7960001 EF39_1-HE 2398 chr3R 7973305 7973330 chr3R 7974393 7974418 1360 5 1088 8.5 2.5 5.5 0.8 1113 chr3R 7973305 intergenic not near genes chr3R 7973862 intergenic not near genes chr3R 7974418 3` UTR CD98hc - chr3R_5_7970001 chr3R_7970001 EF39_1-HE 2399 chr3R 8040650 8040674 chr3R 8040760 8040784 13 110 11.0 13.0 12.0 1.0 134 chr3R 8040650 intergenic not near genes chr3R 8040717 intergenic not near genes chr3R 8040784 intergenic CG43060 + chr3R_13_8040001 chr3R_8040001 EF39_1-HE 2400 chr3R 8090541 8090552 chr3R 8094044 8094054 297 8 3503 11.0 16.5 13.8 0.5 3513 chr3R 8090541 intergenic CR44330 + chr3R 8092298 intergenic not near genes chr3R 8094054 intergenic CG7900 + chr3R_8_8090001 chr3R_8090001 EF39_1-HE 2401 chr3R 8090553 8090567 chr3R 8094042 8094070 297 10 3502 9.0 14.5 11.8 0.8 3517 chr3R 8090553 intergenic CR44330 + chr3R 8092312 intergenic not near genes chr3R 8094070 intergenic CG7900 + chr3R_10_8090001 chr3R_8090001 EF39_1-HE 2402 chr3R 8094387 8094431 chr3R 8099717 8099762 Transpac 15 5331 3.5 3.5 3.5 3.3 5375 chr3R 8094387 intron CG7900 + chr3R 8097074 intron CG7900 + chr3R 8099762 intron CG7900 + chr3R_15_8095001 chr3R_8095001 EF39_1-HE 2403 chr3R 8101742 8101787 chr3R 8104851 8104896 G2 9 3110 6.5 5.5 6.0 1.3 3154 chr3R 8101742 exon CG7900 + chr3R 8103319 intron CG7900 + chr3R 8104896 3` UTR CG7900 + chr3R_9_8100001 chr3R_8100001 EF39_1-HE 2404 chr3R 8158003 8158049 chr3R 8158110 8158157 12 108 10.0 2.0 6.0 1.7 154 chr3R 8158003 intron grn - chr3R 8158080 intron grn - chr3R 8158157 intron grn - chr3R_12_8155001 chr3R_8155001 EF39_1-HE 2405 chr3R 8187447 8187499 chr3R 8187550 8187602 20 101 5.5 5.5 5.5 3.1 155 chr3R 8187447 intergenic not near genes chr3R 8187524 intergenic not near genes chr3R 8187602 intergenic not near genes chr3R_20_8185001 chr3R_8185001 EF39_1-HE 2406 chr3R 8207533 8207568 chr3R 8208404 8208439 F-element 11 871 2.5 4.0 3.2 2.6 906 chr3R 8207533 intergenic not near genes chr3R 8207986 intergenic not near genes chr3R 8208439 intergenic not near genes chr3R_11_8205001 chr3R_8205001 EF39_1-HE 2407 chr3R 8260967 8261016 chr3R 8267984 8268033 8 7018 19.0 23.0 21.0 0.4 7066 chr3R 8260967 intergenic mtg + chr3R 8264500 intergenic RpA-70 -,Mcm2 + chr3R 8268033 exon CG9630 - chr3R_8_8260001 chr3R_8260001 EF39_1-HE 2408 chr3R 8326520 8326567 chr3R 8326643 8326691 14 123 2.5 4.0 3.2 3.3 171 chr3R 8326520 intron Poxm - chr3R 8326606 intron Poxm - chr3R 8326691 intron Poxm - chr3R_14_8325001 chr3R_8325001 EF39_1-HE 2409 chr3R 8402981 8403037 chr3R 8412172 8412225 roo 40 9192 11.5 13.5 12.5 3.0 9244 chr3R 8402981 intron CG45263 - chr3R 8407603 intron CG45263 - chr3R 8412225 intron CG45263 - chr3R_40_8405001 chr3R_8405001 EF39_1-HE 2410 chr3R 8414258 8414312 chr3R 8414361 8414416 30 104 8.5 8.0 8.2 3.3 158 chr3R 8414258 intron CG45263 - chr3R 8414337 intron CG45263 - chr3R 8414416 intron CG45263 - chr3R_30_8410001 chr3R_8410001 EF39_1-HE 2411 chr3R 8570452 8570504 chr3R 8575114 8575166 HMS-Beagle 10 4661 3.5 3.5 3.5 2.2 4714 chr3R 8570452 intergenic not near genes chr3R 8572809 intergenic not near genes chr3R 8575166 intergenic not near genes chr3R_10_8570001 chr3R_8570001 EF39_1-HE 2412 chr3R 8581424 8581467 chr3R 8581544 8581587 8 120 2.5 2.0 2.2 2.5 163 chr3R 8581424 intron 5-HT2B + chr3R 8581506 intron 5-HT2B + chr3R 8581587 intron 5-HT2B + chr3R_8_8580001 chr3R_8580001 EF39_1-HE 2413 chr3R 8601762 8601798 chr3R 8610941 8610977 roo 16 9179 5.0 6.0 5.5 2.5 9215 chr3R 8601762 intron 5-HT2B + chr3R 8606370 intron 5-HT2B + chr3R 8610977 intron 5-HT2B + chr3R_16_8605001 chr3R_8605001 EF39_1-HE 2414 chr3R 8629512 8629566 chr3R 8629617 8629673 13 107 2.5 1.5 2.0 4.3 161 chr3R 8629512 3` UTR 5-HT2B + chr3R 8629592 3` UTR 5-HT2B + chr3R 8629673 3` UTR 5-HT2B + chr3R_13_8625001 chr3R_8625001 EF39_1-HE 2415 chr3R 8630877 8630926 chr3R 8631009 8631058 13 132 2.0 1.5 1.8 4.6 181 chr3R 8630877 intergenic not near genes chr3R 8630968 intergenic not near genes chr3R 8631058 intergenic not near genes chr3R_13_8630001 chr3R_8630001 EF39_1-HE 2416 chr3R 8671386 8671438 chr3R 8671496 8671548 10 110 2.5 5.0 3.8 2.1 162 chr3R 8671386 intron CG8036 + chr3R 8671467 intron CG8036 + chr3R 8671548 intron CG8036 + chr3R_10_8670001 chr3R_8670001 EF39_1-HE 2417 chr3R 8706583 8706633 chr3R 8706702 8706752 21 119 7.0 2.0 4.5 3.8 169 chr3R 8706583 intergenic not near genes chr3R 8706668 intergenic not near genes chr3R 8706752 intergenic not near genes chr3R_21_8705001 chr3R_8705001 EF39_1-HE 2418 chr3R 8707335 8707380 chr3R 8709802 8709847 jockey 14 2466 7.0 8.5 7.8 1.6 2512 chr3R 8707335 intergenic not near genes chr3R 8708591 intergenic not near genes chr3R 8709847 intergenic not near genes chr3R_14_8705001 chr3R_8705001 EF39_1-HE 2419 chr3R 8823273 8823323 chr3R 8823389 8823439 16 116 4.0 4.5 4.2 3.1 166 chr3R 8823273 3` UTR CG9836 - chr3R 8823356 3` UTR CG9836 - chr3R 8823439 exon CG9836 - chr3R_16_8820001 chr3R_8820001 EF39_1-HE 2420 chr3R 8852677 8852726 chr3R 8852780 8852819 15 102 3.0 4.5 3.8 3.1 142 chr3R 8852677 intron pyd - chr3R 8852748 intron pyd - chr3R 8852819 intron pyd - chr3R_15_8850001 chr3R_8850001 EF39_1-HE 2421 chr3R 8893286 8893341 chr3R 8893399 8893454 19 113 2.0 6.5 4.2 3.7 168 chr3R 8893286 intron pyd - chr3R 8893370 intron pyd - chr3R 8893454 intron pyd - chr3R_19_8890001 chr3R_8890001 EF39_1-HE 2422 chr3R 8894859 8894873 chr3R 8896041 8896055 1360 4 1182 7.0 8.0 7.5 0.5 1196 chr3R 8894859 intron pyd - chr3R 8895457 intron pyd - chr3R 8896055 intron pyd - chr3R_4_8895001 chr3R_8895001 EF39_1-HE 2423 chr3R 8898196 8898213 chr3R 8913803 8913821 297 6 15606 12.5 5.5 9.0 0.6 15625 chr3R 8898196 intron pyd - chr3R 8906008 intron pyd - chr3R 8913821 intron pyd - chr3R_6_8905001 chr3R_8905001 EF39_1-HE 2424 chr3R 8979863 8979910 chr3R 8979972 8980019 8 109 1.0 2.5 1.8 2.9 156 chr3R 8979863 intergenic not near genes chr3R 8979941 intergenic not near genes chr3R 8980019 intergenic not near genes chr3R_8_8975001 chr3R_8975001 EF39_1-HE 2425 chr3R 9025954 9025994 chr3R 9026062 9026102 8 105 0.5 4.0 2.2 2.5 148 chr3R 9025954 intron neur - chr3R 9026028 intron neur - chr3R 9026102 intron neur - chr3R_8_9025001 chr3R_9025001 EF39_1-HE 2426 chr3R 9075025 9075073 chr3R 9075127 9075175 18 102 5.0 7.0 6.0 2.6 150 chr3R 9075025 intron pum - chr3R 9075100 intron pum - chr3R 9075175 intron pum - chr3R_18_9075001 chr3R_9075001 EF39_1-HE 2427 chr3R 9098952 9099001 chr3R 9099065 9099114 21 113 3.0 6.0 4.5 3.8 162 chr3R 9098952 intron pum - chr3R 9099033 intron pum - chr3R 9099114 intron pum - chr3R_21_9095001 chr3R_9095001 EF39_1-HE 2428 chr3R 9101817 9101865 chr3R 9101941 9101989 15 124 4.5 3.0 3.8 3.1 172 chr3R 9101817 intron pum - chr3R 9101903 intron pum - chr3R 9101989 intron pum - chr3R_15_9100001 chr3R_9100001 EF39_1-HE 2429 chr3R 9108840 9108883 chr3R 9108942 9108985 22 102 3.5 2.5 3.0 5.5 145 chr3R 9108840 intron pum - chr3R 9108912 intron pum - chr3R 9108985 intron pum - chr3R_22_9105001 chr3R_9105001 EF39_1-HE 2430 chr3R 9141114 9141171 chr3R 9141224 9141280 25 110 5.0 4.5 4.8 4.3 166 chr3R 9141114 intron pum - chr3R 9141197 intron pum - chr3R 9141280 intron pum - chr3R_25_9140001 chr3R_9140001 EF39_1-HE 2431 chr3R 9159891 9159916 chr3R 9160003 9160028 18 112 9.5 8.5 9.0 1.8 137 chr3R 9159891 intron pum - chr3R 9159960 intron pum - chr3R 9160028 intron pum - chr3R_18_9155001 chr3R_9155001 EF39_1-HE 2432 chr3R 9204221 9204274 chr3R 9204334 9204387 35 113 6.0 4.0 5.0 5.8 166 chr3R 9204221 intron pum - chr3R 9204304 intron pum - chr3R 9204387 intron pum - chr3R_35_9200001 chr3R_9200001 EF39_1-HE 2433 chr3R 9204276 9204279 chr3R 9204389 9204392 4 113 3.5 13.5 8.5 0.4 116 chr3R 9204276 intron pum - chr3R 9204334 intron pum - chr3R 9204392 intron pum - chr3R_4_9200001 chr3R_9200001 EF39_1-HE 2434 chr3R 9251410 9251455 chr3R 9251516 9251561 11 106 1.5 2.5 2.0 3.7 151 chr3R 9251410 3` UTR CG8420 + chr3R 9251486 intergenic CG8420 +,St2 + chr3R 9251561 intergenic CG8420 +,St2 + chr3R_11_9250001 chr3R_9250001 EF39_1-HE 2435 chr3R 9278770 9278804 chr3R 9284055 9284090 Rt1a 13 5285 1.0 8.0 4.5 2.4 5320 chr3R 9278770 intergenic not near genes chr3R 9281430 intergenic not near genes chr3R 9284090 intergenic not near genes chr3R_13_9280001 chr3R_9280001 EF39_1-HE 2436 chr3R 9304503 9304512 chr3R 9311815 9311825 Stalker4 5 7312 9.0 5.5 7.2 0.6 7322 chr3R 9304503 intron CG8861 - chr3R 9308164 intron CG8861 - chr3R 9311825 intron CG8861 - chr3R_5_9305001 chr3R_9305001 EF39_1-HE 2437 chr3R 9319552 9319599 chr3R 9320013 9320060 jockey 11 461 6.5 3.0 4.8 1.9 508 chr3R 9319552 intron CG8861 - chr3R 9319806 intron CG8861 - chr3R 9320060 intron CG8861 - chr3R_11_9315001 chr3R_9315001 EF39_1-HE 2438 chr3R 9330251 9330306 chr3R 9330412 9330467 10 161 3.0 2.5 2.8 2.6 216 chr3R 9330251 exon CG12951 - chr3R 9330359 intergenic CG12951 - chr3R 9330467 intergenic CG12951 -,CG16749 - chr3R_10_9330001 chr3R_9330001 EF39_1-HE 2439 chr3R 9361804 9361845 chr3R 9362071 9362112 pogo 10 267 4.5 7.5 6.0 1.4 308 chr3R 9361804 3` UTR CG45050 + chr3R 9361958 3` UTR CG45050 + chr3R 9362112 3` UTR CG45050 + chr3R_10_9360001 chr3R_9360001 EF39_1-HE 2440 chr3R 9379161 9379172 chr3R 9379269 9379280 7 108 0.0 6.5 3.2 1.7 119 chr3R 9379161 intron FER - chr3R 9379220 intron FER - chr3R 9379280 intron FER - chr3R_7_9375001 chr3R_9375001 EF39_1-HE 2441 chr3R 9381048 9381090 chr3R 9381161 9381203 5 113 8.0 3.5 5.8 0.7 155 chr3R 9381048 intron FER - chr3R 9381126 intron FER - chr3R 9381203 intron FER - chr3R_5_9380001 chr3R_9380001 EF39_1-HE 2442 chr3R 9434668 9434718 chr3R 9434781 9434831 18 113 5.0 4.0 4.5 3.3 163 chr3R 9434668 intron ps + chr3R 9434750 intron ps + chr3R 9434831 intron ps + chr3R_18_9430001 chr3R_9430001 EF39_1-HE 2443 chr3R 9475864 9475906 chr3R 9475975 9476017 22 109 5.5 6.5 6.0 3.1 153 chr3R 9475864 intron CG16779 - chr3R 9475940 intron CG16779 - chr3R 9476017 intron CG16779 - chr3R_22_9475001 chr3R_9475001 EF39_1-HE 2444 chr3R 9517165 9517216 chr3R 9517325 9517376 12 160 4.0 3.0 3.5 2.7 211 chr3R 9517165 intron,intron CG8176 +,JHDM2 + chr3R 9517270 intron,intron CG8176 +,JHDM2 + chr3R 9517376 intron,intron CG8176 +,JHDM2 + chr3R_12_9515001 chr3R_9515001 EF39_1-HE 2445 chr3R 9611851 9611887 chr3R 9611959 9611995 10 108 3.0 0.0 1.5 4.0 144 chr3R 9611851 intron CG8312 + chr3R 9611923 intron CG8312 + chr3R 9611995 intron CG8312 + chr3R_10_9610001 chr3R_9610001 EF39_1-HE 2446 chr3R 9699957 9700001 chr3R 9700063 9700116 1360 9 114 2.0 1.5 1.8 3.2 159 chr3R 9699957 intron Unc-115a - chr3R 9700036 intron Unc-115a - chr3R 9700116 intron Unc-115a - chr3R_9_9700001 chr3R_9700001 EF39_1-HE 2447 chr3R 9702259 9702271 chr3R 9702359 9702373 4 102 2.0 6.0 4.0 0.8 114 chr3R 9702259 intron Unc-115a - chr3R 9702316 intron Unc-115a - chr3R 9702373 intron Unc-115a - chr3R_4_9700001 chr3R_9700001 EF39_1-HE 2448 chr3R 9702272 9702289 chr3R 9702357 9702390 6 98 2.5 6.0 4.2 1.2 118 chr3R 9702272 intron Unc-115a - chr3R 9702331 intron Unc-115a - chr3R 9702390 intron Unc-115a - chr3R_6_9700001 chr3R_9700001 EF39_1-HE 2449 chr3R 9740533 9740542 chr3R 9740645 9740654 4 112 4.5 1.5 3.0 1.0 121 chr3R 9740533 intergenic Pnn + chr3R 9740594 intergenic Pnn + chr3R 9740654 intergenic Pnn + chr3R_4_9740001 chr3R_9740001 EF39_1-HE 2450 chr3R 9786430 9786472 chr3R 9786556 9786598 14 126 8.5 6.0 7.2 1.7 168 chr3R 9786430 exon CG8500 + chr3R 9786514 intron CG8500 + chr3R 9786598 exon CG8500 + chr3R_14_9785001 chr3R_9785001 EF39_1-HE 2451 chr3R 9829379 9829435 chr3R 9829490 9829546 20 111 3.0 2.5 2.8 5.3 167 chr3R 9829379 intron Teh1 - chr3R 9829462 intron Teh1 - chr3R 9829546 intron Teh1 - chr3R_20_9825001 chr3R_9825001 EF39_1-HE 2452 chr3R 9836846 9836890 chr3R 9836960 9837004 18 114 5.5 9.5 7.5 2.1 158 chr3R 9836846 intron Teh1 - chr3R 9836925 intron Teh1 - chr3R 9837004 intron Teh1 - chr3R_18_9835001 chr3R_9835001 EF39_1-HE 2453 chr3R 9877994 9878027 chr3R 9878108 9878139 17 114 6.0 4.0 5.0 2.8 145 chr3R 9877994 intron,intron Glut4EF +,CR45029 - chr3R 9878066 intron,intron Glut4EF +,CR45029 - chr3R 9878139 intron,3` UTR Glut4EF +,CR45029 - chr3R_17_9875001 chr3R_9875001 EF39_1-HE 2454 chr3R 9905361 9905367 chr3R 9905511 9905517 4 150 6.0 0.0 3.0 1.0 156 chr3R 9905361 intron Glut4EF + chr3R 9905439 intron Glut4EF + chr3R 9905517 intron Glut4EF + chr3R_4_9905001 chr3R_9905001 EF39_1-HE 2455 chr3R 9908714 9908766 chr3R 9908835 9908887 12 121 1.5 0.5 1.0 6.0 173 chr3R 9908714 intron Glut4EF + chr3R 9908800 intron Glut4EF + chr3R 9908887 intron Glut4EF + chr3R_12_9905001 chr3R_9905001 EF39_1-HE 2456 chr3R 9938638 9938677 chr3R 9938747 9938783 11 113 7.5 2.0 4.8 1.9 145 chr3R 9938638 intron Glut4EF + chr3R 9938710 intron Glut4EF + chr3R 9938783 intron Glut4EF + chr3R_11_9935001 chr3R_9935001 EF39_1-HE 2457 chr3R 9942294 9942331 chr3R 9942399 9942426 7 103 3.5 2.0 2.8 1.8 132 chr3R 9942294 intron Glut4EF + chr3R 9942360 intron Glut4EF + chr3R 9942426 intron Glut4EF + chr3R_7_9940001 chr3R_9940001 EF39_1-HE 2458 chr3R 10110431 10110485 chr3R 10110557 10110611 20 126 4.0 0.5 2.2 6.2 180 chr3R 10110431 intergenic Fmr1 - chr3R 10110521 intergenic Fmr1 - chr3R 10110611 intergenic Fmr1 - chr3R_20_10110001 chr3R_10110001 EF39_1-HE 2459 chr3R 10140410 10140466 chr3R 10140524 10140583 11 116 3.5 3.5 3.5 2.4 173 chr3R 10140410 3` UTR TAF1B - chr3R 10140496 3` UTR TAF1B - chr3R 10140583 3` UTR TAF1B - chr3R_11_10140001 chr3R_10140001 EF39_1-HE 2460 chr3R 10231758 10231808 chr3R 10237361 10237411 mdg3 9 5603 3.5 4.5 4.0 1.8 5653 chr3R 10231758 intron CG42795 + chr3R 10234584 intron CG42795 + chr3R 10237411 intron CG42795 + chr3R_9_10230001 chr3R_10230001 EF39_1-HE 2461 chr3R 10255357 10255379 chr3R 10260823 10260845 I-element 5 5466 5.0 2.0 3.5 1.1 5488 chr3R 10255357 3` UTR Sirt6 - chr3R 10258101 intron Sirt6 - chr3R 10260845 exon Sirt6 - chr3R_5_10255001 chr3R_10255001 EF39_1-HE 2462 chr3R 10277105 10277165 chr3R 10277211 10277271 21 106 2.5 6.0 4.2 4.0 166 chr3R 10277105 intron CG43143 + chr3R 10277188 intron CG43143 + chr3R 10277271 intron CG43143 + chr3R_21_10275001 chr3R_10275001 EF39_1-HE 2463 chr3R 10399575 10399629 chr3R 10399758 10399812 14 183 4.5 2.5 3.5 3.1 237 chr3R 10399575 3` UTR cwo + chr3R 10399694 3` UTR cwo + chr3R 10399812 3` UTR cwo + chr3R_14_10395001 chr3R_10395001 EF39_1-HE 2464 chr3R 10531841 10531893 chr3R 10531947 10531996 24 107 5.5 1.5 3.5 5.3 155 chr3R 10531841 intron hth - chr3R 10531918 intron hth - chr3R 10531996 intron hth - chr3R_24_10530001 chr3R_10530001 EF39_1-HE 2465 chr3R 10535308 10535316 chr3R 10535434 10535442 5 126 4.0 6.0 5.0 0.8 134 chr3R 10535308 intron hth - chr3R 10535375 intron hth - chr3R 10535442 intron hth - chr3R_5_10535001 chr3R_10535001 EF39_1-HE 2466 chr3R 10561797 10561857 chr3R 10561903 10561963 17 106 3.5 3.0 3.2 4.0 166 chr3R 10561797 intron hth - chr3R 10561880 intron hth - chr3R 10561963 exon hth - chr3R_17_10560001 chr3R_10560001 EF39_1-HE 2467 chr3R 10627589 10627627 chr3R 10627727 10627761 4 135 2.0 5.0 3.5 0.9 172 chr3R 10627589 intergenic not near genes chr3R 10627675 intergenic not near genes chr3R 10627761 intergenic not near genes chr3R_4_10625001 chr3R_10625001 EF39_1-HE 2468 chr3R 10646079 10646133 chr3R 10646255 10646310 10 177 3.0 0.5 1.8 3.6 231 chr3R 10646079 intergenic CR44018 + chr3R 10646194 intergenic CR44018 + chr3R 10646310 intergenic not near genes chr3R_10_10645001 chr3R_10645001 EF39_1-HE 2469 chr3R 10649716 10649731 chr3R 10649818 10649833 6 102 11.0 2.0 6.5 0.8 117 chr3R 10649716 intergenic not near genes chr3R 10649774 intergenic not near genes chr3R 10649833 intergenic not near genes chr3R_6_10645001 chr3R_10645001 EF39_1-HE 2470 chr3R 10651785 10651837 chr3R 10651910 10651962 19 125 5.5 3.0 4.2 3.7 177 chr3R 10651785 intergenic not near genes chr3R 10651874 intergenic not near genes chr3R 10651962 intergenic not near genes chr3R_19_10650001 chr3R_10650001 EF39_1-HE 2471 chr3R 10660922 10660968 chr3R 10661066 10661112 27 144 2.5 7.0 4.8 4.7 190 chr3R 10660922 intergenic not near genes chr3R 10661017 intergenic not near genes chr3R 10661112 intergenic not near genes chr3R_27_10660001 chr3R_10660001 EF39_1-HE 2472 chr3R 10714423 10714465 chr3R 10714538 10714579 17 114 5.0 5.5 5.2 2.7 156 chr3R 10714423 intergenic CG4073 + chr3R 10714501 intergenic CG4073 + chr3R 10714579 intergenic CG4073 + chr3R_17_10710001 chr3R_10710001 EF39_1-HE 2473 chr3R 10804148 10804194 chr3R 10811706 10811752 17.6 9 7558 2.0 2.0 2.0 3.0 7604 chr3R 10804148 intergenic CG14692 - chr3R 10807950 intergenic not near genes chr3R 10811752 3` UTR CG14693 - chr3R_9_10805001 chr3R_10805001 EF39_1-HE 2474 chr3R 10823926 10823967 chr3R 10824065 10824106 13 139 7.0 7.0 7.0 1.6 180 chr3R 10823926 intergenic not near genes chr3R 10824016 intergenic not near genes chr3R 10824106 intergenic not near genes chr3R_13_10820001 chr3R_10820001 EF39_1-HE 2475 chr3R 10836633 10836692 chr3R 10836763 10836822 19 129 4.0 5.5 4.8 3.3 189 chr3R 10836633 intron Cad86C + chr3R 10836728 intron Cad86C + chr3R 10836822 intron Cad86C + chr3R_19_10835001 chr3R_10835001 EF39_1-HE 2476 chr3R 10856461 10856493 chr3R 10856564 10856596 8 103 1.0 3.0 2.0 2.7 135 chr3R 10856461 intergenic CG4511 +,CG4570 + chr3R 10856528 intergenic CG4511 +,CG4570 + chr3R 10856596 intergenic CG4511 +,CG4570 + chr3R_8_10855001 chr3R_10855001 EF39_1-HE 2477 chr3R 10868590 10868606 chr3R 10868694 10868710 4 102 4.0 3.5 3.8 0.8 120 chr3R 10868590 5` UTR SelR - chr3R 10868650 intergenic SelR -,Tsp86D + chr3R 10868710 5` UTR Tsp86D + chr3R_4_10865001 chr3R_10865001 EF39_1-HE 2478 chr3R 10886855 10886903 chr3R 10886961 10887009 6 106 2.5 2.5 2.5 1.7 154 chr3R 10886855 intron Leash + chr3R 10886932 intron Leash + chr3R 10887009 intron Leash + chr3R_6_10885001 chr3R_10885001 EF39_1-HE 2479 chr3R 10900430 10900469 chr3R 10900532 10900572 4 103 3.0 3.5 3.2 1.0 142 chr3R 10900430 intergenic not near genes chr3R 10900501 intergenic not near genes chr3R 10900572 intergenic not near genes chr3R_4_10900001 chr3R_10900001 EF39_1-HE 2480 chr3R 10919659 10919718 chr3R 10919763 10919822 16 104 4.0 3.0 3.5 3.6 163 chr3R 10919659 intergenic not near genes chr3R 10919740 intergenic not near genes chr3R 10919822 intergenic not near genes chr3R_16_10915001 chr3R_10915001 EF39_1-HE 2481 chr3R 10920024 10920063 chr3R 10920128 10920167 9 104 7.0 5.0 6.0 1.3 143 chr3R 10920024 intergenic not near genes chr3R 10920096 intergenic not near genes chr3R 10920167 intergenic not near genes chr3R_9_10920001 chr3R_10920001 EF39_1-HE 2482 chr3R 10957860 10957881 chr3R 10963263 10963284 Rt1c 8 5403 11.0 5.0 8.0 0.9 5424 chr3R 10957860 intergenic not near genes chr3R 10960572 intergenic not near genes chr3R 10963284 intergenic not near genes chr3R_8_10960001 chr3R_10960001 EF39_1-HE 2483 chr3R 10984374 10984404 chr3R 10984486 10984538 8 125 8.5 4.0 6.2 1.1 164 chr3R 10984374 intron CG34114 + chr3R 10984456 intron CG34114 + chr3R 10984538 intron CG34114 + chr3R_8_10980001 chr3R_10980001 EF39_1-HE 2484 chr3R 11032693 11032753 chr3R 11033029 11033053 23 333 5.0 6.5 5.8 3.4 360 chr3R 11032693 intron CG34114 + chr3R 11032873 intron CG34114 + chr3R 11033053 intron CG34114 + chr3R_23_11030001 chr3R_11030001 EF39_1-HE 2485 chr3R 11085452 11085477 chr3R 11085555 11085571 4 100 2.5 3.5 3.0 1.0 119 chr3R 11085452 3` UTR CR44940 - chr3R 11085512 intergenic CR44940 - chr3R 11085571 intergenic CR44940 - chr3R_4_11085001 chr3R_11085001 EF39_1-HE 2486 chr3R 11102316 11102328 chr3R 11102423 11102435 6 107 9.0 8.5 8.8 0.6 119 chr3R 11102316 intergenic not near genes chr3R 11102376 intergenic not near genes chr3R 11102435 intergenic not near genes chr3R_6_11100001 chr3R_11100001 EF39_1-HE 2487 chr3R 11103143 11103441 chr3R 11103251 11103547 13 107 4.5 0.0 2.2 4.1 404 chr3R 11103143 intergenic not near genes chr3R 11103345 intergenic not near genes chr3R 11103547 intergenic not near genes chr3R_13_11100001 chr3R_11100001 EF39_1-HE 2488 chr3R 11103443 11103478 chr3R 11103549 11103584 7 106 3.0 9.0 6.0 1.0 141 chr3R 11103443 intergenic not near genes chr3R 11103514 intergenic not near genes chr3R 11103584 intergenic not near genes chr3R_7_11100001 chr3R_11100001 EF39_1-HE 2489 chr3R 11284695 11284732 chr3R 11284783 11284823 16 106 5.0 6.0 5.5 2.5 128 chr3R 11284695 intron CR31386 - chr3R 11284759 intron CR31386 - chr3R 11284823 intron CR31386 - chr3R_16_11280001 chr3R_11280001 EF39_1-HE 2490 chr3R 11302258 11302309 chr3R 11302377 11302428 15 119 6.0 7.0 6.5 2.0 170 chr3R 11302258 intron CR31386 - chr3R 11302343 intron CR31386 - chr3R 11302428 intron CR31386 - chr3R_15_11300001 chr3R_11300001 EF39_1-HE 2491 chr3R 11303514 11303552 chr3R 11303633 11303671 15 118 5.0 9.5 7.2 1.8 157 chr3R 11303514 intron CR31386 - chr3R 11303592 intron CR31386 - chr3R 11303671 intron CR31386 - chr3R_15_11300001 chr3R_11300001 EF39_1-HE 2492 chr3R 11379211 11379251 chr3R 11388392 11388432 roo 19 9181 11.0 9.5 10.2 1.7 9221 chr3R 11379211 intron pros + chr3R 11383822 intron pros + chr3R 11388432 intron pros + chr3R_19_11380001 chr3R_11380001 EF39_1-HE 2493 chr3R 11408730 11408786 chr3R 11408850 11408899 14 120 5.5 4.5 5.0 2.3 169 chr3R 11408730 3` UTR mRpL40 + chr3R 11408814 3` UTR mgr - chr3R 11408899 3` UTR mgr - chr3R_14_11405001 chr3R_11405001 EF39_1-HE 2494 chr3R 11419511 11419562 chr3R 11421475 11421526 6 1964 14.0 12.5 13.2 0.4 2015 chr3R 11419511 exon ninaG - chr3R 11420518 exon ninaG - chr3R 11421526 exon ninaG - chr3R_6_11420001 chr3R_11420001 EF39_1-HE 2495 chr3R 11445538 11445545 chr3R 11445655 11445662 4 116 2.0 5.0 3.5 0.9 124 chr3R 11445538 intron,intron sals -,CG17230 + chr3R 11445600 intron,intron sals -,CG17230 + chr3R 11445662 intron,intron sals -,CG17230 + chr3R_4_11445001 chr3R_11445001 EF39_1-HE 2496 chr3R 11518792 11518842 chr3R 11518909 11518959 11 117 5.0 4.5 4.8 1.9 167 chr3R 11518792 intergenic not near genes chr3R 11518876 intergenic not near genes chr3R 11518959 intergenic not near genes chr3R_11_11515001 chr3R_11515001 EF39_1-HE 2497 chr3R 11613433 11613488 chr3R 11613537 11613592 27 103 0.0 4.0 2.0 9.0 159 chr3R 11613433 intron Jupiter - chr3R 11613512 intron Jupiter - chr3R 11613592 intron Jupiter - chr3R_27_11610001 chr3R_11610001 EF39_1-HE 2498 chr3R 11664765 11664816 chr3R 11664883 11664934 15 118 1.0 3.0 2.0 5.0 169 chr3R 11664765 intron CG42327 + chr3R 11664850 intron CG42327 + chr3R 11664934 intron CG42327 + chr3R_15_11660001 chr3R_11660001 EF39_1-HE 2499 chr3R 11694718 11694756 chr3R 11694837 11694875 7 116 1.0 4.5 2.8 1.8 157 chr3R 11694718 intergenic Fer3 - chr3R 11694796 intergenic Fer3 - chr3R 11694875 intergenic not near genes chr3R_7_11690001 chr3R_11690001 EF39_1-HE 2500 chr3R 11812903 11812959 chr3R 11813016 11813072 17 112 7.5 6.5 7.0 2.1 169 chr3R 11812903 intron ClC-a - chr3R 11812988 intron ClC-a - chr3R 11813072 5` UTR ClC-a - chr3R_17_11810001 chr3R_11810001 EF39_1-HE 2501 chr3R 11830324 11830352 chr3R 11830434 11830462 7 110 5.5 4.5 5.0 1.2 138 chr3R 11830324 intron CG6959 - chr3R 11830393 intron CG6959 - chr3R 11830462 intron CG6959 - chr3R_7_11830001 chr3R_11830001 EF39_1-HE 2502 chr3R 11841045 11841090 chr3R 11846275 11846320 BS 12 5230 2.5 4.0 3.2 2.9 5275 chr3R 11841045 intron CG6959 - chr3R 11843682 intron CG6959 - chr3R 11846320 intron CG6959 - chr3R_12_11840001 chr3R_11840001 EF39_1-HE 2503 chr3R 11850296 11850340 chr3R 11850401 11850445 15 105 5.0 4.5 4.8 2.6 149 chr3R 11850296 intron CG6959 - chr3R 11850370 intron CG6959 - chr3R 11850445 intron CG6959 - chr3R_15_11850001 chr3R_11850001 EF39_1-HE 2504 chr3R 11853742 11853793 chr3R 11853873 11853924 20 131 7.5 4.0 5.8 2.9 182 chr3R 11853742 intron CG6959 - chr3R 11853833 intron CG6959 - chr3R 11853924 intron CG6959 - chr3R_20_11850001 chr3R_11850001 EF39_1-HE 2505 chr3R 11914348 11914397 chr3R 11914459 11914508 13 111 3.0 4.0 3.5 2.9 160 chr3R 11914348 intron Cad87A - chr3R 11914428 intron Cad87A - chr3R 11914508 intron Cad87A - chr3R_13_11910001 chr3R_11910001 EF39_1-HE 2506 chr3R 12022858 12022910 chr3R 12025061 12025113 pogo 7 2203 2.5 3.5 3.0 1.8 2255 chr3R 12022858 intergenic not near genes chr3R 12023986 intergenic not near genes chr3R 12025113 intergenic not near genes chr3R_7_12020001 chr3R_12020001 EF39_1-HE 2507 chr3R 12045150 12045173 chr3R 12045252 12045275 6 102 4.5 4.5 4.5 1.1 125 chr3R 12045150 intergenic not near genes chr3R 12045212 intergenic not near genes chr3R 12045275 intergenic not near genes chr3R_6_12045001 chr3R_12045001 EF39_1-HE 2508 chr3R 12098758 12098774 chr3R 12098868 12098884 5 110 6.0 5.0 5.5 0.8 126 chr3R 12098758 intron dpr17 + chr3R 12098821 intron dpr17 + chr3R 12098884 intron dpr17 + chr3R_5_12095001 chr3R_12095001 EF39_1-HE 2509 chr3R 12102861 12102879 chr3R 12102976 12102994 6 115 7.0 8.0 7.5 0.7 133 chr3R 12102861 intron dpr17 + chr3R 12102928 intron dpr17 + chr3R 12102994 intron dpr17 + chr3R_6_12100001 chr3R_12100001 EF39_1-HE 2510 chr3R 12155735 12155758 chr3R 12155965 12155988 4 230 4.0 5.5 4.8 0.7 253 chr3R 12155735 intron dpr15 - chr3R 12155862 intron dpr15 - chr3R 12155988 intron dpr15 - chr3R_4_12155001 chr3R_12155001 EF39_1-HE 2511 chr3R 12258594 12258651 chr3R 12258725 12258782 17 131 5.5 4.5 5.0 2.8 188 chr3R 12258594 intergenic CG44037 +,svp + chr3R 12258688 intergenic CG44037 +,svp + chr3R 12258782 5` UTR,5` UTR CG44037 +,svp + chr3R_17_12255001 chr3R_12255001 EF39_1-HE 2512 chr3R 12297626 12297645 chr3R 12297729 12297747 10 103 11.0 12.5 11.8 0.8 121 chr3R 12297626 intron svp + chr3R 12297686 intron svp + chr3R 12297747 intron svp + chr3R_10_12295001 chr3R_12295001 EF39_1-HE 2513 chr3R 12359299 12359337 chr3R 12359400 12359448 17 106 2.0 2.5 2.2 5.3 149 chr3R 12359299 intergenic not near genes chr3R 12359374 intergenic not near genes chr3R 12359448 intergenic not near genes chr3R_17_12355001 chr3R_12355001 EF39_1-HE 2514 chr3R 12370397 12370438 chr3R 12378371 12378412 5 7974 31.0 15.0 23.0 0.2 8015 chr3R 12370397 intergenic not near genes chr3R 12374404 exon GstD4 + chr3R 12378412 intergenic GstD7 + chr3R_5_12370001 chr3R_12370001 EF39_1-HE 2515 chr3R 12439877 12439911 chr3R 12440151 12440185 6 274 1.5 2.5 2.0 2.0 308 chr3R 12439877 intron Desat1 + chr3R 12440031 intron Desat1 + chr3R 12440185 intron Desat1 + chr3R_6_12440001 chr3R_12440001 EF39_1-HE 2516 chr3R 12522326 12522383 chr3R 12522438 12522495 23 111 4.5 3.5 4.0 4.6 169 chr3R 12522326 5` UTR Octbeta3R - chr3R 12522410 5` UTR Octbeta3R - chr3R 12522495 5` UTR Octbeta3R - chr3R_23_12520001 chr3R_12520001 EF39_1-HE 2517 chr3R 12552035 12552092 chr3R 12552326 12552383 13 290 2.0 4.5 3.2 3.1 348 chr3R 12552035 3` UTR Octbeta2R - chr3R 12552209 3` UTR Octbeta2R - chr3R 12552383 3` UTR Octbeta2R - chr3R_13_12550001 chr3R_12550001 EF39_1-HE 2518 chr3R 12585780 12585814 chr3R 12586048 12586083 11 269 4.0 7.0 5.5 1.7 303 chr3R 12585780 intron Octbeta2R - chr3R 12585932 intron Octbeta2R - chr3R 12586083 intron Octbeta2R - chr3R_11_12585001 chr3R_12585001 EF39_1-HE 2519 chr3R 12586678 12586731 chr3R 12586781 12586834 16 103 6.5 2.5 4.5 2.9 156 chr3R 12586678 intron Octbeta2R - chr3R 12586756 intron Octbeta2R - chr3R 12586834 intron Octbeta2R - chr3R_16_12585001 chr3R_12585001 EF39_1-HE 2520 chr3R 12669523 12669574 chr3R 12669635 12669686 10 112 2.0 1.0 1.5 4.0 163 chr3R 12669523 intron CG14395 + chr3R 12669604 intron CG14395 + chr3R 12669686 intron CG14395 + chr3R_10_12665001 chr3R_12665001 EF39_1-HE 2521 chr3R 12733449 12733505 chr3R 12733552 12733608 19 103 4.0 4.0 4.0 3.8 159 chr3R 12733449 intergenic not near genes chr3R 12733528 intergenic not near genes chr3R 12733608 intergenic not near genes chr3R_19_12730001 chr3R_12730001 EF39_1-HE 2522 chr3R 12735682 12735722 chr3R 12735806 12735846 5 125 4.5 3.0 3.8 1.0 164 chr3R 12735682 intergenic not near genes chr3R 12735764 intergenic not near genes chr3R 12735846 intergenic not near genes chr3R_5_12735001 chr3R_12735001 EF39_1-HE 2523 chr3R 12749192 12749224 chr3R 12749301 12749333 5 109 1.0 7.5 4.2 1.0 141 chr3R 12749192 intron beat-Vc - chr3R 12749262 intron beat-Vc - chr3R 12749333 intron beat-Vc - chr3R_5_12745001 chr3R_12745001 EF39_1-HE 2524 chr3R 12763103 12763151 chr3R 12763206 12763254 9 103 1.0 2.5 1.8 3.2 151 chr3R 12763103 intron beat-Vc - chr3R 12763178 intron beat-Vc - chr3R 12763254 intron beat-Vc - chr3R_9_12760001 chr3R_12760001 EF39_1-HE 2525 chr3R 12787925 12787955 chr3R 12788034 12788064 10 109 4.5 3.5 4.0 2.0 139 chr3R 12787925 intergenic not near genes chr3R 12787994 intergenic not near genes chr3R 12788064 intergenic not near genes chr3R_10_12785001 chr3R_12785001 EF39_1-HE 2526 chr3R 12792486 12792499 chr3R 12792599 12792612 8 113 2.5 2.0 2.2 2.5 126 chr3R 12792486 intergenic not near genes chr3R 12792549 intergenic not near genes chr3R 12792612 intergenic not near genes chr3R_8_12790001 chr3R_12790001 EF39_1-HE 2527 chr3R 12819002 12819039 chr3R 12819111 12819148 11 109 4.0 2.0 3.0 2.8 146 chr3R 12819002 intergenic not near genes chr3R 12819075 intergenic not near genes chr3R 12819148 intergenic not near genes chr3R_11_12815001 chr3R_12815001 EF39_1-HE 2528 chr3R 12858716 12858760 chr3R 12858823 12858867 11 107 2.0 3.0 2.5 3.1 151 chr3R 12858716 intron CG10126 - chr3R 12858792 intron CG10126 - chr3R 12858867 intron CG10126 - chr3R_11_12855001 chr3R_12855001 EF39_1-HE 2529 chr3R 12864527 12864569 chr3R 12865055 12865097 roo 6 528 2.0 2.0 2.0 2.0 570 chr3R 12864527 intergenic not near genes chr3R 12864812 intergenic not near genes chr3R 12865097 intergenic not near genes chr3R_6_12860001 chr3R_12860001 EF39_1-HE 2530 chr3R 12867750 12867799 chr3R 12867876 12867925 11 126 3.0 4.0 3.5 2.4 175 chr3R 12867750 intergenic not near genes chr3R 12867838 intergenic not near genes chr3R 12867925 intergenic not near genes chr3R_11_12865001 chr3R_12865001 EF39_1-HE 2531 chr3R 12920137 12920182 chr3R 12925362 12925411 copia 12 5228 2.5 5.5 4.0 2.4 5274 chr3R 12920137 intron beat-Vb + chr3R 12922774 intron beat-Vb + chr3R 12925411 intron beat-Vb + chr3R_12_12920001 chr3R_12920001 EF39_1-HE 2532 chr3R 12931193 12931246 chr3R 12931296 12931349 16 103 5.0 5.5 5.2 2.6 156 chr3R 12931193 intron,3` UTR beat-Vb +,CR44236 - chr3R 12931271 intron,3` UTR beat-Vb +,CR44236 - chr3R 12931349 intron beat-Vb + chr3R_16_12930001 chr3R_12930001 EF39_1-HE 2533 chr3R 12935327 12935344 chr3R 12935457 12935474 4 130 1.5 0.0 0.8 2.2 147 chr3R 12935327 intergenic not near genes chr3R 12935400 intergenic not near genes chr3R 12935474 intergenic not near genes chr3R_4_12935001 chr3R_12935001 EF39_1-HE 2534 chr3R 13066989 13067007 chr3R 13067102 13067120 6 113 1.5 2.0 1.8 2.1 131 chr3R 13066989 intron sim + chr3R 13067054 intron sim + chr3R 13067120 intron sim + chr3R_6_13065001 chr3R_13065001 EF39_1-HE 2535 chr3R 13071715 13071763 chr3R 13071818 13071866 15 103 2.0 4.0 3.0 3.8 151 chr3R 13071715 intron sim + chr3R 13071790 intron sim + chr3R 13071866 intron sim + chr3R_15_13070001 chr3R_13070001 EF39_1-HE 2536 chr3R 13090679 13090731 chr3R 13090863 13090915 14 184 5.0 6.5 5.8 2.1 236 chr3R 13090679 intron timeout + chr3R 13090797 intron timeout + chr3R 13090915 intron timeout + chr3R_14_13090001 chr3R_13090001 EF39_1-HE 2537 chr3R 13118421 13118446 chr3R 13118534 13118559 9 113 5.0 6.0 5.5 1.4 138 chr3R 13118421 intron timeout + chr3R 13118490 intron timeout + chr3R 13118559 intron timeout + chr3R_9_13115001 chr3R_13115001 EF39_1-HE 2538 chr3R 13135814 13135850 chr3R 13138005 13138041 pogo 16 2191 6.0 3.0 4.5 2.9 2227 chr3R 13135814 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13136928 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138041 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_16_13135001 chr3R_13135001 EF39_1-HE 2539 chr3R 13143031 13143066 chr3R 13148623 13148667 mdg3 9 5600 4.0 6.0 5.0 1.5 5636 chr3R 13143031 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145849 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148667 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_9_13145001 chr3R_13145001 EF39_1-HE 2540 chr3R 13195958 13195983 chr3R 13196054 13196104 7 117 3.5 2.0 2.8 1.8 146 chr3R 13195958 intergenic not near genes chr3R 13196031 intergenic not near genes chr3R 13196104 intergenic not near genes chr3R_7_13195001 chr3R_13195001 EF39_1-HE 2541 chr3R 13325212 13325236 chr3R 13325318 13325342 8 106 2.0 4.0 3.0 2.0 130 chr3R 13325212 intergenic not near genes chr3R 13325277 intergenic not near genes chr3R 13325342 intergenic not near genes chr3R_8_13325001 chr3R_13325001 EF39_1-HE 2542 chr3R 13378816 13378854 chr3R 13378932 13378971 7 117 2.5 1.5 2.0 2.3 155 chr3R 13378816 intron CG9813 - chr3R 13378894 intron CG9813 - chr3R 13378971 intron CG9813 - chr3R_7_13375001 chr3R_13375001 EF39_1-HE 2543 chr3R 13378858 13378870 chr3R 13378929 13378987 4 106 1.5 1.5 1.5 1.6 129 chr3R 13378858 intron CG9813 - chr3R 13378922 intron CG9813 - chr3R 13378987 intron CG9813 - chr3R_4_13375001 chr3R_13375001 EF39_1-HE 2544 chr3R 13439559 13439600 chr3R 13439666 13439708 8 107 3.5 4.0 3.8 1.7 149 chr3R 13439559 intergenic CR42756 - chr3R 13439634 intergenic CR42756 - chr3R 13439708 intergenic CR42756 - chr3R_8_13435001 chr3R_13435001 EF39_1-HE 2545 chr3R 13484089 13484102 chr3R 13484204 13484217 9 115 10.0 6.5 8.2 1.0 128 chr3R 13484089 intergenic not near genes chr3R 13484153 intergenic not near genes chr3R 13484217 intergenic not near genes chr3R_9_13480001 chr3R_13480001 EF39_1-HE 2546 chr3R 13517204 13517251 chr3R 13520047 13520094 jockey 18 2843 2.5 3.0 2.8 4.7 2890 chr3R 13517204 intergenic not near genes chr3R 13518649 intergenic not near genes chr3R 13520094 intergenic not near genes chr3R_18_13515001 chr3R_13515001 EF39_1-HE 2547 chr3R 13522345 13522371 chr3R 13522467 13522493 5 122 9.0 2.5 5.8 0.7 148 chr3R 13522345 intergenic not near genes chr3R 13522419 intergenic not near genes chr3R 13522493 intergenic CG12538 - chr3R_5_13520001 chr3R_13520001 EF39_1-HE 2548 chr3R 13563327 13563356 chr3R 13563430 13563459 4 103 7.0 2.0 4.5 0.7 132 chr3R 13563327 intergenic not near genes chr3R 13563393 intergenic not near genes chr3R 13563459 intergenic not near genes chr3R_4_13560001 chr3R_13560001 EF39_1-HE 2549 chr3R 13580815 13580831 chr3R 13580924 13580940 6 109 17.0 18.0 17.5 0.3 125 chr3R 13580815 intergenic not near genes chr3R 13580878 intergenic not near genes chr3R 13580940 intergenic not near genes chr3R_6_13580001 chr3R_13580001 EF39_1-HE 2550 chr3R 13599191 13599239 chr3R 13599328 13599373 7 137 2.0 3.0 2.5 2.0 182 chr3R 13599191 intergenic not near genes chr3R 13599282 intergenic not near genes chr3R 13599373 intergenic not near genes chr3R_7_13595001 chr3R_13595001 EF39_1-HE 2551 chr3R 13612258 13612306 chr3R 13612360 13612408 12 98 6.0 3.5 4.8 2.1 150 chr3R 13612258 exon CG9757 - chr3R 13612333 exon CG9757 - chr3R 13612408 5` UTR CG9757 - chr3R_12_13610001 chr3R_13610001 EF39_1-HE 2552 chr3R 13625670 13625722 chr3R 13625777 13625829 7 107 0.5 2.5 1.5 2.8 159 chr3R 13625670 intergenic not near genes chr3R 13625750 intergenic not near genes chr3R 13625829 intergenic not near genes chr3R_7_13625001 chr3R_13625001 EF39_1-HE 2553 chr3R 13706234 13706281 chr3R 13706338 13706373 7 105 1.0 0.5 0.8 3.9 139 chr3R 13706234 intergenic not near genes chr3R 13706304 intergenic Adgf-C + chr3R 13706373 intergenic Adgf-C + chr3R_7_13705001 chr3R_13705001 EF39_1-HE 2554 chr3R 13826502 13826548 chr3R 13826772 13826818 8 268 2.5 1.5 2.0 2.7 316 chr3R 13826502 intergenic not near genes chr3R 13826660 intergenic Mst87F - chr3R 13826818 intergenic Mst87F - chr3R_8_13825001 chr3R_13825001 EF39_1-HE 2555 chr3R 13941393 13941458 chr3R 13941510 13941564 4 112 0.0 1.5 0.8 2.2 171 chr3R 13941393 intergenic not near genes chr3R 13941478 intergenic not near genes chr3R 13941564 intergenic not near genes chr3R_4_13940001 chr3R_13940001 EF39_1-HE 2556 chr3R 14021623 14021662 chr3R 14023466 14023505 S-element 10 1843 5.0 5.0 5.0 1.7 1882 chr3R 14021623 intron rdx - chr3R 14022564 intron rdx - chr3R 14023505 intron rdx - chr3R_10_14020001 chr3R_14020001 EF39_1-HE 2557 chr3R 14035294 14035335 chr3R 14035401 14035442 14 107 3.5 5.0 4.2 2.7 148 chr3R 14035294 intron CG9922 - chr3R 14035368 intron CG9922 - chr3R 14035442 intron CG9922 - chr3R_14_14035001 chr3R_14035001 EF39_1-HE 2558 chr3R 8760373 8760375 chr3R 14035507 14035508 4 5275133 20.5 13.5 17.0 0.2 5275135 chr3R 8760373 intron,intron CG11768 -,CG34135 - chr3R 11397940 3` UTR pros + chr3R 14035508 exon CG9922 - chr3R_4_11395001 chr3R_11395001 EF39_1-HE 2559 chr3R 14045870 14045918 chr3R 14045979 14046027 4 109 9.0 3.5 6.2 0.6 157 chr3R 14045870 intergenic not near genes chr3R 14045948 intergenic not near genes chr3R 14046027 intergenic not near genes chr3R_4_14045001 chr3R_14045001 EF39_1-HE 2560 chr3R 14048809 14048871 chr3R 14049152 14049220 5 347 7.0 2.5 4.8 0.9 411 chr3R 14048809 intergenic not near genes chr3R 14049014 intergenic not near genes chr3R 14049220 intergenic not near genes chr3R_5_14045001 chr3R_14045001 EF39_1-HE 2561 chr3R 14054441 14054485 chr3R 14054575 14054619 11 134 0.5 7.5 4.0 2.2 178 chr3R 14054441 intergenic not near genes chr3R 14054530 intergenic not near genes chr3R 14054619 intergenic not near genes chr3R_11_14050001 chr3R_14050001 EF39_1-HE 2562 chr3R 14056252 14056297 chr3R 14056386 14056439 17 141 4.0 5.0 4.5 3.1 187 chr3R 14056252 intergenic not near genes chr3R 14056346 intergenic not near genes chr3R 14056439 intergenic not near genes chr3R_17_14055001 chr3R_14055001 EF39_1-HE 2563 chr3R 14070102 14070137 chr3R 14070209 14070244 14 107 8.5 6.0 7.2 1.7 142 chr3R 14070102 intron foxo + chr3R 14070173 intron foxo + chr3R 14070244 intron foxo + chr3R_14_14070001 chr3R_14070001 EF39_1-HE 2564 chr3R 14083394 14083414 chr3R 14083521 14083541 8 127 9.5 0.0 4.8 1.4 147 chr3R 14083394 intron foxo + chr3R 14083468 intron foxo + chr3R 14083541 intron foxo + chr3R_8_14080001 chr3R_14080001 EF39_1-HE 2565 chr3R 14095749 14095799 chr3R 14095884 14095934 11 133 2.5 4.0 3.2 2.6 185 chr3R 14095749 intron CCHa1 - chr3R 14095842 intron CCHa1 - chr3R 14095934 intron CCHa1 - chr3R_11_14095001 chr3R_14095001 EF39_1-HE 2566 chr3R 14097157 14097209 chr3R 14097269 14097330 12 116 3.0 0.0 1.5 4.8 173 chr3R 14097157 intergenic CG9920 -,CCHa1 - chr3R 14097244 intergenic CG9920 -,CCHa1 - chr3R 14097330 3` UTR CG9920 - chr3R_12_14095001 chr3R_14095001 EF39_1-HE 2567 chr3R 14170125 14170171 chr3R 14170241 14170287 7 115 2.0 3.0 2.5 2.0 162 chr3R 14170125 3` UTR Dop1R1 - chr3R 14170206 3` UTR Dop1R1 - chr3R 14170287 3` UTR Dop1R1 - chr3R_7_14170001 chr3R_14170001 EF39_1-HE 2568 chr3R 14180785 14180845 chr3R 14185576 14185636 F-element 7 4791 4.0 2.5 3.2 1.7 4851 chr3R 14180785 intron Dop1R1 - chr3R 14183210 intron Dop1R1 - chr3R 14185636 intron Dop1R1 - chr3R_7_14180001 chr3R_14180001 EF39_1-HE 2569 chr3R 14210219 14210252 chr3R 14210326 14210359 10 107 3.0 4.0 3.5 2.2 140 chr3R 14210219 intron Dop1R1 - chr3R 14210289 intron Dop1R1 - chr3R 14210359 intron Dop1R1 - chr3R_10_14210001 chr3R_14210001 EF39_1-HE 2570 chr3R 14246401 14246416 chr3R 14247891 14247938 jockey 4 1512 2.0 3.0 2.5 1.1 1537 chr3R 14246401 intergenic not near genes chr3R 14247170 intergenic not near genes chr3R 14247938 intergenic not near genes chr3R_4_14245001 chr3R_14245001 EF39_1-HE 2571 chr3R 14327666 14327725 chr3R 14327774 14327833 16 106 3.5 4.5 4.0 3.2 167 chr3R 14327666 3` UTR CG3321 + chr3R 14327750 intergenic CG3321 +,spn-B + chr3R 14327833 intergenic CG3321 +,spn-B + chr3R_16_14325001 chr3R_14325001 EF39_1-HE 2572 chr3R 14442539 14442583 chr3R 14442646 14442690 9 107 2.5 3.0 2.8 2.4 151 chr3R 14442539 intron cv-c - chr3R 14442614 intron cv-c - chr3R 14442690 intron cv-c - chr3R_9_14440001 chr3R_14440001 EF39_1-HE 2573 chr3R 14539151 14539170 chr3R 14539259 14539278 4 108 0.5 5.0 2.8 1.1 127 chr3R 14539151 intron Pde6 - chr3R 14539214 intron Pde6 - chr3R 14539278 intron Pde6 - chr3R_4_14535001 chr3R_14535001 EF39_1-HE 2574 chr3R 14608448 14608475 chr3R 14608566 14608593 5 118 1.5 3.5 2.5 1.4 145 chr3R 14608448 intergenic stumps + chr3R 14608520 intergenic stumps + chr3R 14608593 intergenic not near genes chr3R_5_14605001 chr3R_14605001 EF39_1-HE 2575 chr3R 14662296 14662336 chr3R 14662403 14662443 13 107 4.5 6.5 5.5 2.0 147 chr3R 14662296 exon Rad17 - chr3R 14662370 intron Rad17 - chr3R 14662443 exon Rad17 - chr3R_13_14660001 chr3R_14660001 EF39_1-HE 2576 chr3R 14704362 14704415 chr3R 14704465 14704518 18 103 6.5 8.5 7.5 2.1 156 chr3R 14704362 intron kibra - chr3R 14704440 intron kibra - chr3R 14704518 intron kibra - chr3R_18_14700001 chr3R_14700001 EF39_1-HE 2577 chr3R 14714617 14714632 chr3R 14714736 14714751 4 119 9.5 8.0 8.8 0.4 134 chr3R 14714617 intron kibra - chr3R 14714684 intron kibra - chr3R 14714751 intron kibra - chr3R_4_14710001 chr3R_14710001 EF39_1-HE 2578 chr3R 14866098 14866138 chr3R 14866202 14866240 12 104 4.5 3.5 4.0 2.4 142 chr3R 14866098 intron btsz - chr3R 14866169 intron btsz - chr3R 14866240 intron btsz - chr3R_12_14865001 chr3R_14865001 EF39_1-HE 2579 chr3R 14869837 14869893 chr3R 14869954 14870010 9 116 2.0 2.5 2.2 2.8 173 chr3R 14869837 intron btsz - chr3R 14869924 intron btsz - chr3R 14870010 intron btsz - chr3R_9_14865001 chr3R_14865001 EF39_1-HE 2580 chr3R 14910086 14910129 chr3R 14910208 14910252 9 123 3.0 2.5 2.8 2.4 166 chr3R 14910086 intergenic not near genes chr3R 14910169 intergenic not near genes chr3R 14910252 intergenic not near genes chr3R_9_14910001 chr3R_14910001 EF39_1-HE 2581 chr3R 14955125 14955174 chr3R 14955241 14955289 11 115 4.5 3.0 3.8 2.3 164 chr3R 14955125 intergenic not near genes chr3R 14955207 intergenic not near genes chr3R 14955289 intergenic not near genes chr3R_11_14955001 chr3R_14955001 EF39_1-HE 2582 chr3R 14979269 14979299 chr3R 14979357 14979394 4 91 4.0 2.5 3.2 1.0 125 chr3R 14979269 intergenic not near genes chr3R 14979332 intergenic not near genes chr3R 14979394 intergenic not near genes chr3R_4_14975001 chr3R_14975001 EF39_1-HE 2583 chr3R 15010818 15010870 chr3R 15010932 15010984 19 114 3.5 3.0 3.2 4.5 166 chr3R 15010818 intergenic not near genes chr3R 15010901 intergenic not near genes chr3R 15010984 intergenic not near genes chr3R_19_15010001 chr3R_15010001 EF39_1-HE 2584 chr3R 15041402 15041456 chr3R 15045196 15045250 Doc 13 3794 1.0 4.5 2.8 3.4 3848 chr3R 15041402 intergenic not near genes chr3R 15043326 intergenic not near genes chr3R 15045250 intergenic not near genes chr3R_13_15040001 chr3R_15040001 EF39_1-HE 2585 chr3R 15079788 15079838 chr3R 15080055 15080105 pogo 11 267 3.5 5.5 4.5 2.0 317 chr3R 15079788 3` UTR CG6966 - chr3R 15079946 3` UTR CG6966 - chr3R 15080105 3` UTR CG6966 - chr3R_11_15075001 chr3R_15075001 EF39_1-HE 2586 chr3R 15087434 15087473 chr3R 15088381 15088420 7 947 2.0 4.5 3.2 1.7 986 chr3R 15087434 intron CG6966 - chr3R 15087927 intron CG6966 - chr3R 15088420 intron CG6966 - chr3R_7_15085001 chr3R_15085001 EF39_1-HE 2587 chr3R 15102487 15102531 chr3R 15109769 15109811 412 6 7281 4.0 3.0 3.5 1.3 7324 chr3R 15102487 intron CG42788 - chr3R 15106149 intron CG42788 - chr3R 15109811 intron CG42788 - chr3R_6_15105001 chr3R_15105001 EF39_1-HE 2588 chr3R 15114901 15114929 chr3R 15115004 15115032 15 103 5.5 1.5 3.5 3.3 131 chr3R 15114901 intron CG42788 - chr3R 15114966 intron CG42788 - chr3R 15115032 intron CG42788 - chr3R_15_15110001 chr3R_15110001 EF39_1-HE 2589 chr3R 15127755 15127810 chr3R 15127861 15127916 18 106 4.0 3.5 3.8 3.8 161 chr3R 15127755 intron CG42788 - chr3R 15127836 intron CG42788 - chr3R 15127916 intron CG42788 - chr3R_18_15125001 chr3R_15125001 EF39_1-HE 2590 chr3R 15132045 15132076 chr3R 15135131 15135162 Juan 20 3086 9.0 13.0 11.0 1.7 3117 chr3R 15132045 intergenic CG42788 - chr3R 15133604 intergenic not near genes chr3R 15135162 3` UTR CG6912 - chr3R_20_15130001 chr3R_15130001 EF39_1-HE 2591 chr3R 15156200 15156241 chr3R 15156373 15156414 6 173 5.0 0.5 2.8 1.6 214 chr3R 15156200 intron Gyc88E + chr3R 15156307 intron Gyc88E + chr3R 15156414 intron Gyc88E + chr3R_6_15155001 chr3R_15155001 EF39_1-HE 2592 chr3R 15162527 15162547 chr3R 15167320 15167340 F-element 5 4792 8.0 4.5 6.2 0.7 4813 chr3R 15162527 intron Gyc88E + chr3R 15164934 intron Gyc88E + chr3R 15167340 intron Gyc88E + chr3R_5_15160001 chr3R_15160001 EF39_1-HE 2593 chr3R 15302482 15302534 chr3R 15302586 15302637 19 103 5.0 5.5 5.2 3.1 155 chr3R 15302482 intron Tm1 + chr3R 15302560 intron Tm1 + chr3R 15302637 intron Tm1 + chr3R_19_15300001 chr3R_15300001 EF39_1-HE 2594 chr3R 15311251 15311288 chr3R 15311380 15311417 12 129 3.0 2.5 2.8 3.2 166 chr3R 15311251 intron Tm2 + chr3R 15311334 intron Tm2 + chr3R 15311417 intron Tm2 + chr3R_12_15310001 chr3R_15310001 EF39_1-HE 2595 chr3R 15406123 15406157 chr3R 15406230 15406264 7 107 3.5 2.0 2.8 1.8 141 chr3R 15406123 intron CG6125 - chr3R 15406194 intron CG6125 - chr3R 15406264 intron CG6125 - chr3R_7_15405001 chr3R_15405001 EF39_1-HE 2596 chr3R 15500734 15500781 chr3R 15500850 15500897 11 115 7.0 7.0 7.0 1.4 163 chr3R 15500734 intergenic not near genes chr3R 15500816 intergenic not near genes chr3R 15500897 intergenic not near genes chr3R_11_15500001 chr3R_15500001 EF39_1-HE 2597 chr3R 15521312 15521343 chr3R 15521471 15521524 8 177 5.5 0.5 3.0 2.0 212 chr3R 15521312 intergenic not near genes chr3R 15521418 intergenic not near genes chr3R 15521524 intergenic not near genes chr3R_8_15520001 chr3R_15520001 EF39_1-HE 2598 chr3R 15586805 15586859 chr3R 15586987 15587028 13 180 2.5 5.0 3.8 2.7 223 chr3R 15586805 intergenic not near genes chr3R 15586916 intergenic not near genes chr3R 15587028 intergenic not near genes chr3R_13_15585001 chr3R_15585001 EF39_1-HE 2599 chr3R 15594660 15594673 chr3R 15594767 15594782 5 109 0.0 7.5 3.8 1.0 122 chr3R 15594660 intergenic not near genes chr3R 15594721 intergenic not near genes chr3R 15594782 intergenic not near genes chr3R_5_15590001 chr3R_15590001 EF39_1-HE 2600 chr3R 15601171 15601193 chr3R 15608686 15608741 412 7 7543 5.0 2.0 3.5 1.6 7570 chr3R 15601171 intergenic not near genes chr3R 15604956 intergenic not near genes chr3R 15608741 intergenic not near genes chr3R_7_15600001 chr3R_15600001 EF39_1-HE 2601 chr3R 15615689 15615741 chr3R 15615798 15615849 11 109 4.5 2.5 3.5 2.4 160 chr3R 15615689 intergenic not near genes chr3R 15615769 intergenic not near genes chr3R 15615849 intergenic not near genes chr3R_11_15615001 chr3R_15615001 EF39_1-HE 2602 chr3R 15618727 15618735 chr3R 15626227 15626235 blood 5 7500 7.5 3.0 5.2 0.8 7508 chr3R 15618727 intergenic not near genes chr3R 15622481 intergenic not near genes chr3R 15626235 intergenic not near genes chr3R_5_15620001 chr3R_15620001 EF39_1-HE 2603 chr3R 15630894 15630927 chr3R 15631009 15631042 14 115 11.5 5.5 8.5 1.5 148 chr3R 15630894 intergenic not near genes chr3R 15630968 intergenic not near genes chr3R 15631042 intergenic not near genes chr3R_14_15630001 chr3R_15630001 EF39_1-HE 2604 chr3R 15630929 15630950 chr3R 15631007 15631065 11 112 7.0 5.0 6.0 1.6 136 chr3R 15630929 intergenic not near genes chr3R 15630997 intergenic not near genes chr3R 15631065 intergenic not near genes chr3R_11_15630001 chr3R_15630001 EF39_1-HE 2605 chr3R 15691287 15691339 chr3R 15691427 15691480 14 141 4.0 4.0 4.0 2.8 193 chr3R 15691287 intergenic not near genes chr3R 15691384 intergenic not near genes chr3R 15691480 intergenic not near genes chr3R_14_15690001 chr3R_15690001 EF39_1-HE 2606 chr3R 15734150 15734192 chr3R 15734267 15734309 13 117 10.5 9.5 10.0 1.2 159 chr3R 15734150 intergenic not near genes chr3R 15734230 intergenic not near genes chr3R 15734309 intergenic not near genes chr3R_13_15730001 chr3R_15730001 EF39_1-HE 2607 chr3R 15735226 15735235 chr3R 15739972 15739981 F-element 4 4746 3.5 8.0 5.8 0.6 4755 chr3R 15735226 intergenic not near genes chr3R 15737604 intergenic not near genes chr3R 15739981 intergenic not near genes chr3R_4_15735001 chr3R_15735001 EF39_1-HE 2608 chr3R 15744096 15744115 chr3R 15744211 15744230 11 115 2.5 12.5 7.5 1.3 134 chr3R 15744096 intergenic not near genes chr3R 15744163 intergenic CG4520 + chr3R 15744230 intergenic CG4520 + chr3R_11_15740001 chr3R_15740001 EF39_1-HE 2609 chr3R 15790108 15790261 chr3R 15790242 15790405 45 138 14.0 14.5 14.2 3.0 297 chr3R 15790108 exon c(3)G - chr3R 15790256 exon c(3)G - chr3R 15790405 exon c(3)G - chr3R_45_15790001 chr3R_15790001 EF39_1-HE 2610 chr3R 15790278 15790401 chr3R 15790398 15790633 29 262 9.0 9.5 9.2 2.8 355 chr3R 15790278 exon c(3)G - chr3R 15790456 exon c(3)G - chr3R 15790633 exon c(3)G - chr3R_29_15790001 chr3R_15790001 EF39_1-HE 2611 chr3R 15790619 15790844 chr3R 15790737 15790986 16 140 32.0 60.0 46.0 0.3 367 chr3R 15790619 exon c(3)G - chr3R 15790802 exon c(3)G - chr3R 15790986 exon c(3)G - chr3R_16_15790001 chr3R_15790001 EF39_1-HE 2612 chr3R 15790845 15790873 chr3R 15790987 15790987 14 140 19.5 37.0 28.2 0.5 142 chr3R 15790845 exon c(3)G - chr3R 15790916 intron c(3)G - chr3R 15790987 exon c(3)G - chr3R_14_15790001 chr3R_15790001 EF39_1-HE 2613 chr3R 15880400 15880425 chr3R 15881730 15881755 5 1330 2.0 2.0 2.0 1.7 1355 chr3R 15880400 intergenic not near genes chr3R 15881078 intergenic not near genes chr3R 15881755 intergenic not near genes chr3R_5_15880001 chr3R_15880001 EF39_1-HE 2614 chr3R 15890900 15890943 chr3R 15891026 15891069 13 125 2.5 3.0 2.8 3.4 169 chr3R 15890900 intron CG14877 - chr3R 15890984 intron CG14877 - chr3R 15891069 intron CG14877 - chr3R_13_15890001 chr3R_15890001 EF39_1-HE 2615 chr3R 15948278 15948316 chr3R 15948605 15948643 7 326 2.0 5.0 3.5 1.6 365 chr3R 15948278 intron Sap47 + chr3R 15948460 intron Sap47 + chr3R 15948643 intron Sap47 + chr3R_7_15945001 chr3R_15945001 EF39_1-HE 2616 chr3R 16033386 16033440 chr3R 16033493 16033547 13 107 3.0 3.5 3.2 3.1 161 chr3R 16033386 intron pnr + chr3R 16033466 intron pnr + chr3R 16033547 intron pnr + chr3R_13_16030001 chr3R_16030001 EF39_1-HE 2617 chr3R 16078658 16078707 chr3R 16078761 16078810 12 102 2.0 3.5 2.8 3.2 152 chr3R 16078658 intron Mhcl - chr3R 16078734 intron Mhcl - chr3R 16078810 intron Mhcl - chr3R_12_16075001 chr3R_16075001 EF39_1-HE 2618 chr3R 16137319 16137350 chr3R 16137450 16137481 12 130 8.5 4.5 6.5 1.6 162 chr3R 16137319 intron Sb + chr3R 16137400 intron Sb + chr3R 16137481 intron Sb + chr3R_12_16135001 chr3R_16135001 EF39_1-HE 2619 chr3R 16144139 16144191 chr3R 16144257 16144309 13 118 3.5 3.5 3.5 2.9 170 chr3R 16144139 exon Sb + chr3R 16144224 intron Sb + chr3R 16144309 intron Sb + chr3R_13_16140001 chr3R_16140001 EF39_1-HE 2620 chr3R 16189387 16189426 chr3R 16189814 16189853 invader4 5 427 6.5 1.5 4.0 1.0 466 chr3R 16189387 intron sra + chr3R 16189620 intron sra + chr3R 16189853 intron sra + chr3R_5_16185001 chr3R_16185001 EF39_1-HE 2621 chr3R 16206386 16206436 chr3R 16206499 16206549 11 113 2.0 4.5 3.2 2.6 163 chr3R 16206386 intergenic not near genes chr3R 16206468 intergenic not near genes chr3R 16206549 intergenic not near genes chr3R_11_16205001 chr3R_16205001 EF39_1-HE 2622 chr3R 16217614 16217655 chr3R 16217715 16217758 6 103 2.5 3.0 2.8 1.6 144 chr3R 16217614 intergenic not near genes chr3R 16217686 intergenic not near genes chr3R 16217758 intergenic not near genes chr3R_6_16215001 chr3R_16215001 EF39_1-HE 2623 chr3R 16225066 16225114 chr3R 16225177 16225225 7 111 2.5 3.0 2.8 1.8 159 chr3R 16225066 intergenic not near genes chr3R 16225146 intergenic not near genes chr3R 16225225 intergenic tara + chr3R_7_16225001 chr3R_16225001 EF39_1-HE 2624 chr3R 16237936 16237987 chr3R 16238063 16238114 18 127 6.0 5.5 5.8 2.6 178 chr3R 16237936 intron tara + chr3R 16238025 intron tara + chr3R 16238114 intron tara + chr3R_18_16235001 chr3R_16235001 EF39_1-HE 2625 chr3R 16246525 16246554 chr3R 16246627 16246656 5 102 2.0 7.0 4.5 0.9 131 chr3R 16246525 intron tara + chr3R 16246590 intron tara + chr3R 16246656 intron tara + chr3R_5_16245001 chr3R_16245001 EF39_1-HE 2626 chr3R 16256561 16256616 chr3R 16256677 16256744 11 126 2.0 0.0 1.0 5.5 183 chr3R 16256561 intron tara + chr3R 16256652 intron tara + chr3R 16256744 intron tara + chr3R_11_16255001 chr3R_16255001 EF39_1-HE 2627 chr3R 16284868 16284919 chr3R 16284972 16285024 21 104 11.5 5.0 8.2 2.3 156 chr3R 16284868 intron gish + chr3R 16284946 intron gish + chr3R 16285024 intron gish + chr3R_21_16280001 chr3R_16280001 EF39_1-HE 2628 chr3R 16472565 16472591 chr3R 16472667 16472693 9 102 8.5 6.0 7.2 1.1 128 chr3R 16472565 intergenic Gyc-89Da + chr3R 16472629 5` UTR Gyc-89Da + chr3R 16472693 5` UTR Gyc-89Da + chr3R_9_16470001 chr3R_16470001 EF39_1-HE 2629 chr3R 16582883 16582916 chr3R 16582988 16583021 13 105 6.0 6.5 6.2 1.8 138 chr3R 16582883 intron Scp2 - chr3R 16582952 intron Scp2 - chr3R 16583021 intron Scp2 - chr3R_13_16580001 chr3R_16580001 EF39_1-HE 2630 chr3R 16620363 16620391 chr3R 16620529 16620557 6 166 0.5 2.0 1.2 2.7 194 chr3R 16620363 intergenic CG14893 +,CG17560 + chr3R 16620460 intergenic CG14893 + chr3R 16620557 intergenic CG14893 + chr3R_6_16620001 chr3R_16620001 EF39_1-HE 2631 chr3R 16633670 16633681 chr3R 16633796 16633807 6 126 14.0 14.0 14.0 0.4 137 chr3R 16633670 intron Fas1 + chr3R 16633738 intron Fas1 + chr3R 16633807 intron Fas1 + chr3R_6_16630001 chr3R_16630001 EF39_1-HE 2632 chr3R 16702340 16702379 chr3R 16702594 16702633 13 254 2.0 4.5 3.2 3.1 293 chr3R 16702340 intron Ubx - chr3R 16702486 intron Ubx - chr3R 16702633 intron Ubx - chr3R_13_16700001 chr3R_16700001 EF39_1-HE 2633 chr3R 16732133 16732158 chr3R 16732255 16732280 6 122 0.0 1.5 0.8 3.3 147 chr3R 16732133 intron Ubx - chr3R 16732206 intron Ubx - chr3R 16732280 intron Ubx - chr3R_6_16730001 chr3R_16730001 EF39_1-HE 2634 chr3R 16734858 16734878 chr3R 16734967 16734987 6 109 0.0 4.0 2.0 2.0 129 chr3R 16734858 intergenic Ubx - chr3R 16734922 intergenic Ubx - chr3R 16734987 intergenic not near genes chr3R_6_16730001 chr3R_16730001 EF39_1-HE 2635 chr3R 16736339 16736372 chr3R 16736438 16736475 6 102 0.0 2.0 1.0 3.0 136 chr3R 16736339 intergenic not near genes chr3R 16736407 intergenic not near genes chr3R 16736475 intergenic not near genes chr3R_6_16735001 chr3R_16735001 EF39_1-HE 2636 chr3R 16756299 16756354 chr3R 16762514 16762556 diver 13 6216 4.0 4.5 4.2 2.5 6257 chr3R 16756299 intron bxd - chr3R 16759428 intron bxd - chr3R 16762556 intron bxd - chr3R_13_16755001 chr3R_16755001 EF39_1-HE 2637 chr3R 16811024 16811061 chr3R 16811152 16811189 6 128 5.5 3.5 4.5 1.1 165 chr3R 16811024 intron abd-A - chr3R 16811106 intron abd-A - chr3R 16811189 intron abd-A - chr3R_6_16810001 chr3R_16810001 EF39_1-HE 2638 chr3R 16936923 16936980 chr3R 16937045 16937102 22 122 6.0 6.0 6.0 3.1 179 chr3R 16936923 intron Abd-B - chr3R 16937012 intron Abd-B - chr3R 16937102 intron Abd-B - chr3R_22_16935001 chr3R_16935001 EF39_1-HE 2639 chr3R 17023985 17023996 chr3R 17024164 17024175 4 179 7.0 0.0 3.5 0.9 190 chr3R 17023985 intron Pxd + chr3R 17024080 intron Pxd + chr3R 17024175 intron Pxd + chr3R_4_17020001 chr3R_17020001 EF39_1-HE 2640 chr3R 17027721 17027768 chr3R 17031124 17031171 9 3403 16.5 7.0 11.8 0.7 3450 chr3R 17027721 exon Pxd + chr3R 17029446 intron CG5225 + chr3R 17031171 intergenic CG5225 + chr3R_9_17025001 chr3R_17025001 EF39_1-HE 2641 chr3R 17125647 17125674 chr3R 17128137 17128164 5 2490 6.5 13.5 10.0 0.5 2517 chr3R 17125647 intergenic cher -,CG17477 - chr3R 17126906 exon CG17477 - chr3R 17128164 3` UTR CG31269 + chr3R_5_17125001 chr3R_17125001 EF39_1-HE 2642 chr3R 17184710 17184756 chr3R 17184812 17184858 10 102 1.5 2.5 2.0 3.3 148 chr3R 17184710 intron Mur89F - chr3R 17184784 intron Mur89F - chr3R 17184858 intron Mur89F - chr3R_10_17180001 chr3R_17180001 EF39_1-HE 2643 chr3R 17195536 17195561 chr3R 17195638 17195663 6 102 4.5 8.5 6.5 0.8 127 chr3R 17195536 intron Mur89F - chr3R 17195600 intron Mur89F - chr3R 17195663 intron Mur89F - chr3R_6_17195001 chr3R_17195001 EF39_1-HE 2644 chr3R 17209688 17209704 chr3R 17209802 17209810 5 112 8.0 6.0 7.0 0.6 122 chr3R 17209688 intergenic not near genes chr3R 17209749 intergenic not near genes chr3R 17209810 intergenic not near genes chr3R_5_17205001 chr3R_17205001 EF39_1-HE 2645 chr3R 17290416 17290465 chr3R 17290528 17290577 20 112 1.5 5.0 3.2 4.8 161 chr3R 17290416 intergenic not near genes chr3R 17290496 intergenic not near genes chr3R 17290577 intergenic not near genes chr3R_20_17290001 chr3R_17290001 EF39_1-HE 2646 chr3R 17294649 17294689 chr3R 17295103 17295142 BS 10 454 2.5 2.5 2.5 2.9 493 chr3R 17294649 intergenic not near genes chr3R 17294896 intergenic not near genes chr3R 17295142 intergenic not near genes chr3R_10_17290001 chr3R_17290001 EF39_1-HE 2647 chr3R 17326480 17326531 chr3R 17326588 17326639 4 108 2.5 0.0 1.2 1.8 159 chr3R 17326480 intron beat-IIa - chr3R 17326560 intron beat-IIa - chr3R 17326639 intron beat-IIa - chr3R_4_17325001 chr3R_17325001 EF39_1-HE 2648 chr3R 17346668 17346714 chr3R 17348257 17348303 F-element 8 1589 1.5 6.0 3.8 1.7 1635 chr3R 17346668 intron beat-IIa - chr3R 17347486 intron beat-IIa - chr3R 17348303 intron beat-IIa - chr3R_8_17345001 chr3R_17345001 EF39_1-HE 2649 chr3R 17351250 17351314 chr3R 17351367 17351423 12 114 1.0 3.5 2.2 3.8 173 chr3R 17351250 intron beat-IIa - chr3R 17351336 intron beat-IIa - chr3R 17351423 intron beat-IIa - chr3R_12_17350001 chr3R_17350001 EF39_1-HE 2650 chr3R 17369873 17369914 chr3R 17370009 17370050 6 136 2.5 2.0 2.2 1.9 177 chr3R 17369873 intergenic not near genes chr3R 17369962 intergenic not near genes chr3R 17370050 intergenic not near genes chr3R_6_17365001 chr3R_17365001 EF39_1-HE 2651 chr3R 17377969 17377995 chr3R 17379658 17379684 7 1689 29.0 19.5 24.2 0.3 1715 chr3R 17377969 intron Brf - chr3R 17378826 intron Brf - chr3R 17379684 intron Brf - chr3R_7_17375001 chr3R_17375001 EF39_1-HE 2652 chr3R 17409802 17409851 chr3R 17415229 17415268 10 5422 34.0 9.0 21.5 0.4 5466 chr3R 17409802 exon CG5860 + chr3R 17412535 3` UTR CG5863 + chr3R 17415268 intergenic CG5866 + chr3R_10_17410001 chr3R_17410001 EF39_1-HE 2653 chr3R 17452642 17452697 chr3R 17452744 17452799 6 102 1.5 3.5 2.5 1.7 157 chr3R 17452642 intergenic not near genes chr3R 17452720 intergenic not near genes chr3R 17452799 intergenic not near genes chr3R_6_17450001 chr3R_17450001 EF39_1-HE 2654 chr3R 17463131 17463183 chr3R 17463236 17463294 17 110 3.0 1.0 2.0 5.7 163 chr3R 17463131 intergenic not near genes chr3R 17463212 intergenic not near genes chr3R 17463294 intergenic not near genes chr3R_17_17460001 chr3R_17460001 EF39_1-HE 2655 chr3R 17467194 17467205 chr3R 17467693 17467704 4 499 1.0 1.0 1.0 2.0 510 chr3R 17467194 intergenic not near genes chr3R 17467449 intergenic not near genes chr3R 17467704 intergenic not near genes chr3R_4_17465001 chr3R_17465001 EF39_1-HE 2656 chr3R 17497944 17497982 chr3R 17498056 17498094 10 112 4.0 6.5 5.2 1.6 150 chr3R 17497944 intron Dscam3 - chr3R 17498019 intron Dscam3 - chr3R 17498094 intron Dscam3 - chr3R_10_17495001 chr3R_17495001 EF39_1-HE 2657 chr3R 17507424 17507477 chr3R 17507528 17507581 8 104 2.5 3.0 2.8 2.1 157 chr3R 17507424 intergenic not near genes chr3R 17507502 intergenic not near genes chr3R 17507581 intergenic not near genes chr3R_8_17505001 chr3R_17505001 EF39_1-HE 2658 chr3R 17518094 17518141 chr3R 17518200 17518247 9 106 3.0 0.5 1.8 3.2 153 chr3R 17518094 intergenic CR44349 - chr3R 17518170 intergenic CR44349 - chr3R 17518247 3` UTR CR44349 - chr3R_9_17515001 chr3R_17515001 EF39_1-HE 2659 chr3R 17527374 17527421 chr3R 17528164 17528214 14 792 37.5 31.5 34.5 0.4 840 chr3R 17527374 intergenic not near genes chr3R 17527794 intergenic not near genes chr3R 17528214 intergenic not near genes chr3R_14_17525001 chr3R_17525001 EF39_1-HE 2660 chr3R 17553357 17553365 chr3R 17553459 17553467 5 102 0.5 10.5 5.5 0.8 110 chr3R 17553357 intergenic not near genes chr3R 17553412 intergenic not near genes chr3R 17553467 intergenic not near genes chr3R_5_17550001 chr3R_17550001 EF39_1-HE 2661 chr3R 17591270 17591301 chr3R 17591732 17591763 F-element 7 462 5.0 2.5 3.8 1.5 493 chr3R 17591270 intergenic not near genes chr3R 17591516 intergenic not near genes chr3R 17591763 intergenic not near genes chr3R_7_17590001 chr3R_17590001 EF39_1-HE 2662 chr3R 17611974 17611996 chr3R 17612091 17612113 5 117 0.5 3.0 1.8 1.8 139 chr3R 17611974 intergenic Edg91 - chr3R 17612044 intergenic not near genes chr3R 17612113 intergenic not near genes chr3R_5_17610001 chr3R_17610001 EF39_1-HE 2663 chr3R 17638312 17638345 chr3R 17638824 17638857 roo 9 512 4.5 7.5 6.0 1.3 545 chr3R 17638312 intron CG43175 + chr3R 17638584 intron CG43175 + chr3R 17638857 intron,intron CG43175 +,CR45222 + chr3R_9_17635001 chr3R_17635001 EF39_1-HE 2664 chr3R 17663322 17663346 chr3R 17663494 17663518 8 172 0.0 10.0 5.0 1.3 196 chr3R 17663322 exon CG14322 + chr3R 17663420 exon CG14322 + chr3R 17663518 exon CG14322 + chr3R_8_17660001 chr3R_17660001 EF39_1-HE 2665 chr3R 17682551 17682604 chr3R 17682661 17682714 9 110 0.0 1.5 0.8 5.0 163 chr3R 17682551 intergenic alt -,CG7655 + chr3R 17682632 intergenic CG7655 +,alt - chr3R 17682714 5` UTR CG7655 + chr3R_9_17680001 chr3R_17680001 EF39_1-HE 2666 chr3R 17695756 17695794 chr3R 17695862 17695898 13 106 3.5 2.0 2.8 3.4 142 chr3R 17695756 intron osa - chr3R 17695827 intron osa - chr3R 17695898 intron osa - chr3R_13_17695001 chr3R_17695001 EF39_1-HE 2667 chr3R 17734090 17734133 chr3R 17734204 17734248 13 115 3.5 3.5 3.5 2.9 158 chr3R 17734090 3` UTR CG14321 + chr3R 17734169 3` UTR CG14321 + chr3R 17734248 3` UTR CG14321 + chr3R_13_17730001 chr3R_17730001 EF39_1-HE 2668 chr3R 17734822 17734860 chr3R 17734961 17734999 13 139 2.5 0.5 1.5 5.2 177 chr3R 17734822 intergenic CG14321 + chr3R 17734910 intergenic not near genes chr3R 17734999 intergenic not near genes chr3R_13_17730001 chr3R_17730001 EF39_1-HE 2669 chr3R 17753165 17753224 chr3R 17753414 17753473 14 249 6.0 3.0 4.5 2.5 308 chr3R 17753165 intron TyrR - chr3R 17753319 intron TyrR - chr3R 17753473 intron TyrR - chr3R_14_17750001 chr3R_17750001 EF39_1-HE 2670 chr3R 17758200 17758235 chr3R 17758310 17758345 9 110 3.0 2.0 2.5 2.6 145 chr3R 17758200 intron TyrR - chr3R 17758272 intron TyrR - chr3R 17758345 intron TyrR - chr3R_9_17755001 chr3R_17755001 EF39_1-HE 2671 chr3R 17773356 17773386 chr3R 17773477 17773507 6 121 4.0 9.0 6.5 0.8 151 chr3R 17773356 exon CG43102 - chr3R 17773432 intron CG43102 - chr3R 17773507 exon CG43102 - chr3R_6_17770001 chr3R_17770001 EF39_1-HE 2672 chr3R 17780989 17781043 chr3R 17781093 17781147 12 103 3.5 5.5 4.5 2.2 158 chr3R 17780989 intron CG43102 - chr3R 17781068 intron CG43102 - chr3R 17781147 intron CG43102 - chr3R_12_17780001 chr3R_17780001 EF39_1-HE 2673 chr3R 17790125 17790155 chr3R 17790237 17790267 9 111 2.5 5.0 3.8 1.9 142 chr3R 17790125 intron CG43102 - chr3R 17790196 intron CG43102 - chr3R 17790267 intron CG43102 - chr3R_9_17790001 chr3R_17790001 EF39_1-HE 2674 chr3R 17824199 17824230 chr3R 17824324 17824355 12 123 9.0 8.0 8.5 1.3 156 chr3R 17824199 intron tinc + chr3R 17824277 intron tinc + chr3R 17824355 intron tinc + chr3R_12_17820001 chr3R_17820001 EF39_1-HE 2675 chr3R 17842050 17842088 chr3R 17842382 17842421 9 332 4.5 3.5 4.0 1.8 371 chr3R 17842050 intron tinc + chr3R 17842236 intron tinc + chr3R 17842421 intron tinc + chr3R_9_17840001 chr3R_17840001 EF39_1-HE 2676 chr3R 17861672 17861720 chr3R 17861795 17861844 13 124 7.0 0.5 3.8 2.7 172 chr3R 17861672 intron tinc + chr3R 17861758 intron tinc + chr3R 17861844 intron tinc + chr3R_13_17860001 chr3R_17860001 EF39_1-HE 2677 chr3R 17925831 17925874 chr3R 17927324 17927367 hobo 18 1493 12.0 9.0 10.5 1.6 1536 chr3R 17925831 intron cpo + chr3R 17926599 intron cpo + chr3R 17927367 intron cpo + chr3R_18_17925001 chr3R_17925001 EF39_1-HE 2678 chr3R 17955783 17955834 chr3R 17955885 17955936 11 102 6.0 0.0 3.0 2.8 153 chr3R 17955783 intron cpo + chr3R 17955860 intron cpo + chr3R 17955936 intron cpo + chr3R_11_17955001 chr3R_17955001 EF39_1-HE 2679 chr3R 17960444 17960495 chr3R 17960550 17960601 22 106 5.0 5.5 5.2 3.5 157 chr3R 17960444 intron cpo + chr3R 17960522 intron cpo + chr3R 17960601 intron cpo + chr3R_22_17960001 chr3R_17960001 EF39_1-HE 2680 chr3R 17968079 17968131 chr3R 17968183 17968235 10 104 3.0 3.5 3.2 2.4 156 chr3R 17968079 intron cpo + chr3R 17968157 intron cpo + chr3R 17968235 intron cpo + chr3R_10_17965001 chr3R_17965001 EF39_1-HE 2681 chr3R 17983199 17983226 chr3R 17983314 17983333 9 113 3.5 0.0 1.8 3.2 134 chr3R 17983199 intron cpo + chr3R 17983266 intron cpo + chr3R 17983333 intron cpo + chr3R_9_17980001 chr3R_17980001 EF39_1-HE 2682 chr3R 18003010 18003038 chr3R 18003132 18003160 17 122 11.5 0.0 5.8 2.5 150 chr3R 18003010 intron cpo + chr3R 18003085 intron cpo + chr3R 18003160 intron cpo + chr3R_17_18000001 chr3R_18000001 EF39_1-HE 2683 chr3R 18008322 18008346 chr3R 18008433 18008457 5 111 0.0 6.0 3.0 1.2 135 chr3R 18008322 intron cpo + chr3R 18008390 intron cpo + chr3R 18008457 intron cpo + chr3R_5_18005001 chr3R_18005001 EF39_1-HE 2684 chr3R 18032783 18032809 chr3R 18040477 18040501 opus 4 7694 0.5 4.0 2.2 1.2 7718 chr3R 18032783 intergenic not near genes chr3R 18036642 intergenic not near genes chr3R 18040501 intergenic not near genes chr3R_4_18035001 chr3R_18035001 EF39_1-HE 2685 chr3R 18041741 18041758 chr3R 18041844 18041861 6 103 3.0 0.0 1.5 2.4 120 chr3R 18041741 intergenic not near genes chr3R 18041801 intergenic not near genes chr3R 18041861 intergenic not near genes chr3R_6_18040001 chr3R_18040001 EF39_1-HE 2686 chr3R 18049717 18049742 chr3R 18049828 18049849 5 110 1.5 1.5 1.5 2.0 132 chr3R 18049717 intron htl - chr3R 18049783 intron htl - chr3R 18049849 intron htl - chr3R_5_18045001 chr3R_18045001 EF39_1-HE 2687 chr3R 18061586 18061601 chr3R 18063187 18063202 F-element 4 1601 4.5 5.5 5.0 0.7 1616 chr3R 18061586 intergenic not near genes chr3R 18062394 intergenic not near genes chr3R 18063202 intergenic not near genes chr3R_4_18060001 chr3R_18060001 EF39_1-HE 2688 chr3R 18066775 18066825 chr3R 18066907 18066957 14 130 4.5 5.5 5.0 2.3 182 chr3R 18066775 intergenic not near genes chr3R 18066866 intergenic not near genes chr3R 18066957 intergenic not near genes chr3R_14_18065001 chr3R_18065001 EF39_1-HE 2689 chr3R 18112344 18112393 chr3R 18112453 18112501 8 109 0.5 3.5 2.0 2.7 157 chr3R 18112344 intron sr + chr3R 18112422 intron sr + chr3R 18112501 intron sr + chr3R_8_18110001 chr3R_18110001 EF39_1-HE 2690 chr3R 18143471 18143512 chr3R 18143584 18143626 7 114 4.0 0.5 2.2 2.2 155 chr3R 18143471 intergenic not near genes chr3R 18143548 intergenic not near genes chr3R 18143626 intergenic not near genes chr3R_7_18140001 chr3R_18140001 EF39_1-HE 2691 chr3R 18157463 18157615 chr3R 18157582 18157749 4 130 0.0 0.0 0.0 4.0 286 chr3R 18157463 intergenic CR45103 + chr3R 18157606 intergenic CR45103 + chr3R 18157749 5` UTR CR45103 + chr3R_4_18155001 chr3R_18155001 EF39_1-HE 2692 chr3R 18262731 18262781 chr3R 18262836 18262889 8 108 1.5 3.0 2.2 2.5 158 chr3R 18262731 intergenic not near genes chr3R 18262810 intergenic not near genes chr3R 18262889 intergenic not near genes chr3R_8_18260001 chr3R_18260001 EF39_1-HE 2693 chr3R 18326832 18326844 chr3R 18326950 18326965 4 120 3.5 1.0 2.2 1.2 133 chr3R 18326832 intron CG31235 - chr3R 18326898 intron CG31235 - chr3R 18326965 intron CG31235 - chr3R_4_18325001 chr3R_18325001 EF39_1-HE 2694 chr3R 18328562 18328590 chr3R 18328679 18328708 9 118 2.0 10.0 6.0 1.3 146 chr3R 18328562 intron CG31235 - chr3R 18328635 intron CG31235 - chr3R 18328708 intron CG31235 - chr3R_9_18325001 chr3R_18325001 EF39_1-HE 2695 chr3R 18350800 18350857 chr3R 18350921 18350978 25 121 3.0 2.5 2.8 6.6 178 chr3R 18350800 intron CG15803 - chr3R 18350889 intron CG15803 - chr3R 18350978 intron CG15803 - chr3R_25_18350001 chr3R_18350001 EF39_1-HE 2696 chr3R 18352547 18352599 chr3R 18352666 18352718 15 119 9.5 5.0 7.2 1.8 171 chr3R 18352547 intron CG15803 - chr3R 18352632 intron CG15803 - chr3R 18352718 intron CG15803 - chr3R_15_18350001 chr3R_18350001 EF39_1-HE 2697 chr3R 18373445 18373471 chr3R 18373656 18373682 6 211 3.0 3.0 3.0 1.5 237 chr3R 18373445 intergenic CG14310 + chr3R 18373564 intergenic CG14310 + chr3R 18373682 intergenic CG14310 + chr3R_6_18370001 chr3R_18370001 EF39_1-HE 2698 chr3R 18394447 18394501 chr3R 18394550 18394603 9 103 2.5 3.0 2.8 2.4 156 chr3R 18394447 intron Vha100-2 - chr3R 18394525 intron Vha100-2 - chr3R 18394603 intron Vha100-2 - chr3R_9_18390001 chr3R_18390001 EF39_1-HE 2699 chr3R 18472264 18472298 chr3R 18472391 18472425 7 127 1.0 4.0 2.5 2.0 161 chr3R 18472264 intron fru - chr3R 18472344 intron fru - chr3R 18472425 intron fru - chr3R_7_18470001 chr3R_18470001 EF39_1-HE 2700 chr3R 18473234 18473248 chr3R 18473347 18473361 5 113 0.0 6.0 3.0 1.2 127 chr3R 18473234 intron fru - chr3R 18473298 intron fru - chr3R 18473361 intron fru - chr3R_5_18470001 chr3R_18470001 EF39_1-HE 2701 chr3R 18606507 18606533 chr3R 18610753 18610780 F-element 8 4247 0.5 3.0 1.8 2.9 4273 chr3R 18606507 intron,intron qin +,CG14304 - chr3R 18608644 intron,intron qin +,CG14304 - chr3R 18610780 intron,intron qin +,CG14304 - chr3R_8_18605001 chr3R_18605001 EF39_1-HE 2702 chr3R 18618241 18618280 chr3R 18618352 18618391 14 111 3.0 1.5 2.2 4.4 150 chr3R 18618241 intron,intron qin +,CG14304 - chr3R 18618316 intron,intron qin +,CG14304 - chr3R 18618391 intron,intron qin +,CG14304 - chr3R_14_18615001 chr3R_18615001 EF39_1-HE 2703 chr3R 18620068 18620124 chr3R 18620195 18620251 15 127 5.5 2.0 3.8 3.1 183 chr3R 18620068 intron,intron qin +,CG14304 - chr3R 18620160 intron,intron qin +,CG14304 - chr3R 18620251 intron,intron qin +,CG14304 - chr3R_15_18620001 chr3R_18620001 EF39_1-HE 2704 chr3R 18649904 18649932 chr3R 18650011 18650039 5 107 6.5 2.0 4.2 1.0 135 chr3R 18649904 3` UTR qin + chr3R 18649972 3` UTR qin + chr3R 18650039 3` UTR qin + chr3R_5_18645001 chr3R_18645001 EF39_1-HE 2705 chr3R 18695738 18695748 chr3R 18695848 18695858 4 110 15.0 0.0 7.5 0.5 120 chr3R 18695738 3` UTR CG34282 + chr3R 18695798 intergenic CG34282 + chr3R 18695858 intergenic CG34282 + chr3R_4_18695001 chr3R_18695001 EF39_1-HE 2706 chr3R 18703259 18703283 chr3R 18703393 18703417 6 134 6.0 0.0 3.0 1.5 158 chr3R 18703259 intergenic not near genes chr3R 18703338 intergenic not near genes chr3R 18703417 intergenic not near genes chr3R_6_18700001 chr3R_18700001 EF39_1-HE 2707 chr3R 18729998 18730037 chr3R 18730100 18730139 13 99 3.5 4.5 4.0 2.6 141 chr3R 18729998 exon Cha + chr3R 18730068 intron Cha + chr3R 18730139 exon Cha + chr3R_13_18730001 chr3R_18730001 EF39_1-HE 2708 chr3R 18763032 18763086 chr3R 18763158 18763212 19 126 1.5 4.5 3.0 4.8 180 chr3R 18763032 intron CG7720 - chr3R 18763122 intron CG7720 - chr3R 18763212 intron CG7720 - chr3R_19_18760001 chr3R_18760001 EF39_1-HE 2709 chr3R 18766798 18766814 chr3R 18766900 18766916 9 102 8.5 5.0 6.8 1.2 118 chr3R 18766798 intron CG7720 - chr3R 18766857 intron CG7720 - chr3R 18766916 intron CG7720 - chr3R_9_18765001 chr3R_18765001 EF39_1-HE 2710 chr3R 18807303 18807331 chr3R 18807406 18807434 13 103 7.5 0.0 3.8 2.7 131 chr3R 18807303 intron CG18208 - chr3R 18807368 intron CG18208 - chr3R 18807434 intron CG18208 - chr3R_13_18805001 chr3R_18805001 EF39_1-HE 2711 chr3R 18812069 18812101 chr3R 18812173 18812205 14 104 7.5 8.0 7.8 1.6 136 chr3R 18812069 intron CG18208 - chr3R 18812137 intron CG18208 - chr3R 18812205 intron CG18208 - chr3R_14_18810001 chr3R_18810001 EF39_1-HE 2712 chr3R 18817482 18817538 chr3R 18817606 18817662 21 124 1.0 0.5 0.8 11.7 180 chr3R 18817482 intron CG18208 - chr3R 18817572 intron CG18208 - chr3R 18817662 intron CG18208 - chr3R_21_18815001 chr3R_18815001 EF39_1-HE 2713 chr3R 18839786 18839835 chr3R 18839896 18839945 17 110 5.5 3.5 4.5 3.1 159 chr3R 18839786 intron CG18208 - chr3R 18839866 intron CG18208 - chr3R 18839945 intron CG18208 - chr3R_17_18835001 chr3R_18835001 EF39_1-HE 2714 chr3R 18865315 18865347 chr3R 18865618 18865650 5 303 4.5 4.0 4.2 1.0 335 chr3R 18865315 intergenic not near genes chr3R 18865482 intergenic not near genes chr3R 18865650 intergenic not near genes chr3R_5_18865001 chr3R_18865001 EF39_1-HE 2715 chr3R 18865360 18865367 chr3R 18865617 18865670 4 289 2.5 4.0 3.2 1.0 310 chr3R 18865360 intergenic not near genes chr3R 18865515 intergenic not near genes chr3R 18865670 intergenic not near genes chr3R_4_18865001 chr3R_18865001 EF39_1-HE 2716 chr3R 18879819 18879843 chr3R 18879930 18879954 9 111 4.0 6.0 5.0 1.5 135 chr3R 18879819 intergenic not near genes chr3R 18879886 intergenic not near genes chr3R 18879954 intergenic not near genes chr3R_9_18875001 chr3R_18875001 EF39_1-HE 2717 chr3R 18883257 18883294 chr3R 18883364 18883401 11 107 9.5 8.5 9.0 1.1 144 chr3R 18883257 intergenic not near genes chr3R 18883329 intergenic not near genes chr3R 18883401 intergenic not near genes chr3R_11_18880001 chr3R_18880001 EF39_1-HE 2718 chr3R 18948110 18948154 chr3R 18948215 18948258 13 105 2.0 4.5 3.2 3.1 148 chr3R 18948110 intron CG42613 + chr3R 18948184 intron CG42613 + chr3R 18948258 intron CG42613 + chr3R_13_18945001 chr3R_18945001 EF39_1-HE 2719 chr3R 18952283 18952337 chr3R 18952391 18952445 9 107 3.0 2.0 2.5 2.6 162 chr3R 18952283 intron,intron CG42613 +,CG43732 + chr3R 18952364 intron,intron CG42613 +,CG43732 + chr3R 18952445 intron,intron CG42613 +,CG43732 + chr3R_9_18950001 chr3R_18950001 EF39_1-HE 2720 chr3R 18961959 18961997 chr3R 18962062 18962100 17 102 11.0 10.5 10.8 1.4 141 chr3R 18961959 intron,intron CG42613 +,CG43732 + chr3R 18962030 intron,intron CG42613 +,CG43732 + chr3R 18962100 intron,intron CG42613 +,CG43732 + chr3R_17_18960001 chr3R_18960001 EF39_1-HE 2721 chr3R 18965178 18965230 chr3R 18965397 18965449 19 219 5.0 7.5 6.2 2.6 271 chr3R 18965178 intron,intron CG42613 +,CG43732 + chr3R 18965314 intron,intron CG42613 +,CG43732 + chr3R 18965449 intron,intron CG42613 +,CG43732 + chr3R_19_18965001 chr3R_18965001 EF39_1-HE 2722 chr3R 18988688 18988700 chr3R 18988847 18988859 5 159 0.0 5.0 2.5 1.4 171 chr3R 18988688 intron gukh + chr3R 18988774 intron gukh + chr3R 18988859 intron gukh + chr3R_5_18985001 chr3R_18985001 EF39_1-HE 2723 chr3R 19057512 19057718 chr3R 19057633 19057830 21 119 12.0 2.5 7.2 2.6 318 chr3R 19057512 intron cdi - chr3R 19057671 intron cdi - chr3R 19057830 intron cdi - chr3R_21_19055001 chr3R_19055001 EF39_1-HE 2724 chr3R 19062816 19062867 chr3R 19062946 19062997 10 130 2.5 4.5 3.5 2.2 181 chr3R 19062816 intron cdi - chr3R 19062906 intron cdi - chr3R 19062997 intron cdi - chr3R_10_19060001 chr3R_19060001 EF39_1-HE 2725 chr3R 19080685 19080688 chr3R 22455897 22455900 4 3375212 19.0 6.0 12.5 0.3 3375215 chr3R 19080685 intron cdi - chr3R 20768292 intron Syp + chr3R 22455900 intron CG34376 + chr3R_4_20765001 chr3R_20765001 EF39_1-HE 2726 chr3R 19113134 19113166 chr3R 19113252 19113284 7 117 4.5 3.5 4.0 1.4 150 chr3R 19113134 intron CG6040 + chr3R 19113209 intron CG6040 + chr3R 19113284 intron CG6040 + chr3R_7_19110001 chr3R_19110001 EF39_1-HE 2727 chr3R 19116994 19117050 chr3R 19117111 19117168 22 118 2.5 7.5 5.0 3.7 174 chr3R 19116994 intron CG6040 + chr3R 19117081 intron CG6040 + chr3R 19117168 intron CG6040 + chr3R_22_19115001 chr3R_19115001 EF39_1-HE 2728 chr3R 19120764 19120803 chr3R 19120900 19120938 10 136 3.5 6.5 5.0 1.7 174 chr3R 19120764 intron CG6040 + chr3R 19120851 intron CG6040 + chr3R 19120938 intron CG6040 + chr3R_10_19120001 chr3R_19120001 EF39_1-HE 2729 chr3R 19137070 19137103 chr3R 19138878 19138919 Bari1 5 1813 4.0 0.5 2.2 1.6 1849 chr3R 19137070 exon Cyp12a4 + chr3R 19137994 intergenic not near genes chr3R 19138919 intergenic Ppcs - chr3R_5_19135001 chr3R_19135001 EF39_1-HE 2730 chr3R 19183411 19183456 chr3R 19183516 19183561 11 105 4.0 1.5 2.8 2.9 150 chr3R 19183411 intron CG31475 + chr3R 19183486 intron CG31475 + chr3R 19183561 intron CG31475 + chr3R_11_19180001 chr3R_19180001 EF39_1-HE 2731 chr3R 19205340 19205399 chr3R 19205520 19205580 17 179 4.5 5.5 5.0 2.8 240 chr3R 19205340 intergenic not near genes chr3R 19205460 intergenic not near genes chr3R 19205580 intergenic not near genes chr3R_17_19205001 chr3R_19205001 EF39_1-HE 2732 chr3R 19220000 19220045 chr3R 19220113 19220158 11 112 4.0 2.0 3.0 2.8 158 chr3R 19220000 intron vib - chr3R 19220079 intron vib - chr3R 19220158 intron vib - chr3R_11_19220001 chr3R_19220001 EF39_1-HE 2733 chr3R 19310753 19310779 chr3R 19310861 19310887 7 108 10.0 7.5 8.8 0.7 134 chr3R 19310753 intron Dl - chr3R 19310820 intron Dl - chr3R 19310887 intron Dl - chr3R_7_19310001 chr3R_19310001 EF39_1-HE 2734 chr3R 19337188 19337206 chr3R 19337297 19337315 9 109 9.0 12.5 10.8 0.8 127 chr3R 19337188 intergenic not near genes chr3R 19337252 intergenic not near genes chr3R 19337315 intergenic not near genes chr3R_9_19335001 chr3R_19335001 EF39_1-HE 2735 chr3R 19344642 19344695 chr3R 19344803 19344856 12 161 3.0 6.5 4.8 2.1 214 chr3R 19344642 intergenic not near genes chr3R 19344749 intergenic not near genes chr3R 19344856 intergenic not near genes chr3R_12_19340001 chr3R_19340001 EF39_1-HE 2736 chr3R 19377404 19377447 chr3R 19377512 19377554 18 108 4.0 8.5 6.2 2.5 150 chr3R 19377404 intron Ino80 - chr3R 19377479 intron Ino80 - chr3R 19377554 intron Ino80 - chr3R_18_19375001 chr3R_19375001 EF39_1-HE 2737 chr3R 19474843 19474897 chr3R 19475004 19475058 14 161 5.5 3.5 4.5 2.5 215 chr3R 19474843 intron Dys + chr3R 19474950 intron Dys + chr3R 19475058 intron Dys + chr3R_14_19470001 chr3R_19470001 EF39_1-HE 2738 chr3R 19494386 19494404 chr3R 19494492 19494510 9 106 5.0 6.5 5.8 1.3 124 chr3R 19494386 intron Dys + chr3R 19494448 intron Dys + chr3R 19494510 intron Dys + chr3R_9_19490001 chr3R_19490001 EF39_1-HE 2739 chr3R 19541954 19541958 chr3R 19542188 19542192 4 234 5.5 11.5 8.5 0.4 238 chr3R 19541954 intron Dys + chr3R 19542073 intron Dys + chr3R 19542192 intron Dys + chr3R_4_19540001 chr3R_19540001 EF39_1-HE 2740 chr3R 19564967 19564997 chr3R 19565072 19565085 6 102 2.5 2.0 2.2 1.9 118 chr3R 19564967 intron Dys + chr3R 19565026 intron Dys + chr3R 19565085 intron Dys + chr3R_6_19565001 chr3R_19565001 EF39_1-HE 2741 chr3R 19568351 19568375 chr3R 19568554 19568578 13 202 4.5 4.0 4.2 2.5 227 chr3R 19568351 intron Dys + chr3R 19568464 intron Dys + chr3R 19568578 intron Dys + chr3R_13_19565001 chr3R_19565001 EF39_1-HE 2742 chr3R 19593478 19593515 chr3R 19593589 19593626 11 111 6.0 4.5 5.2 1.8 148 chr3R 19593478 intron Dys + chr3R 19593552 intron Dys + chr3R 19593626 intron Dys + chr3R_11_19590001 chr3R_19590001 EF39_1-HE 2743 chr3R 19602715 19602749 chr3R 19602874 19602908 5 159 4.0 6.0 5.0 0.8 193 chr3R 19602715 intergenic CG7333 + chr3R 19602812 intergenic CG7333 + chr3R 19602908 intergenic CG7333 +,CG7342 + chr3R_5_19600001 chr3R_19600001 EF39_1-HE 2744 chr3R 19611993 19612049 chr3R 19616000 19616057 9 4007 29.0 9.0 19.0 0.5 4064 chr3R 19611993 exon CG17752 + chr3R 19614025 exon CG16727 + chr3R 19616057 3` UTR CG6231 - chr3R_9_19610001 chr3R_19610001 EF39_1-HE 2745 chr3R 19702296 19702354 chr3R 19702404 19702462 12 106 2.0 3.5 2.8 3.2 166 chr3R 19702296 intergenic not near genes chr3R 19702379 intergenic not near genes chr3R 19702462 intergenic not near genes chr3R_12_19700001 chr3R_19700001 EF39_1-HE 2746 chr3R 19718900 19718934 chr3R 19719006 19719040 10 106 0.0 6.5 3.2 2.4 140 chr3R 19718900 intergenic not near genes chr3R 19718970 intergenic not near genes chr3R 19719040 intergenic not near genes chr3R_10_19715001 chr3R_19715001 EF39_1-HE 2747 chr3R 19785607 19785653 chr3R 19785719 19785765 14 112 3.0 3.5 3.2 3.3 158 chr3R 19785607 intergenic CG11453 + chr3R 19785686 intergenic CG11453 + chr3R 19785765 intergenic CG11453 + chr3R_14_19785001 chr3R_19785001 EF39_1-HE 2748 chr3R 19825015 19825048 chr3R 19825122 19825155 10 107 6.5 4.0 5.2 1.6 140 chr3R 19825015 intron bnl - chr3R 19825085 intron bnl - chr3R 19825155 intron bnl - chr3R_10_19825001 chr3R_19825001 EF39_1-HE 2749 chr3R 19894774 19894831 chr3R 19894876 19894933 8 102 3.0 6.0 4.5 1.5 159 chr3R 19894774 intron CG4733 + chr3R 19894854 intron CG4733 + chr3R 19894933 intron CG4733 + chr3R_8_19890001 chr3R_19890001 EF39_1-HE 2750 chr3R 19955330 19955379 chr3R 19955457 19955506 6 127 6.0 8.0 7.0 0.8 176 chr3R 19955330 intron Hs6st - chr3R 19955418 intron Hs6st - chr3R 19955506 intron Hs6st - chr3R_6_19955001 chr3R_19955001 EF39_1-HE 2751 chr3R 19967553 19967592 chr3R 19967662 19967701 13 109 0.0 4.5 2.2 4.1 148 chr3R 19967553 intron Hs6st - chr3R 19967627 intron Hs6st - chr3R 19967701 intron Hs6st - chr3R_13_19965001 chr3R_19965001 EF39_1-HE 2752 chr3R 20059440 20059495 chr3R 20059546 20059601 12 103 4.0 3.0 3.5 2.7 161 chr3R 20059440 intron CG4390 - chr3R 20059520 intron CG4390 - chr3R 20059601 exon CG4390 - chr3R_12_20055001 chr3R_20055001 EF39_1-HE 2753 chr3R 20066093 20066147 chr3R 20066309 20066362 12 215 4.0 0.0 2.0 4.0 269 chr3R 20066093 intergenic not near genes chr3R 20066228 intergenic not near genes chr3R 20066362 intergenic not near genes chr3R_12_20065001 chr3R_20065001 EF39_1-HE 2754 chr3R 20066530 20066574 chr3R 20066792 20066836 13 262 3.5 3.5 3.5 2.9 306 chr3R 20066530 intergenic not near genes chr3R 20066683 intergenic not near genes chr3R 20066836 intergenic not near genes chr3R_13_20065001 chr3R_20065001 EF39_1-HE 2755 chr3R 20109517 20109565 chr3R 20114747 20114797 copia 12 5232 5.0 7.5 6.2 1.7 5280 chr3R 20109517 intergenic not near genes chr3R 20112157 intergenic not near genes chr3R 20114797 intergenic CG10887 + chr3R_12_20110001 chr3R_20110001 EF39_1-HE 2756 chr3R 20147098 20147154 chr3R 20147332 20147388 16 233 2.0 1.5 1.8 5.7 290 chr3R 20147098 intergenic not near genes chr3R 20147243 intergenic not near genes chr3R 20147388 intergenic not near genes chr3R_16_20145001 chr3R_20145001 EF39_1-HE 2757 chr3R 20156673 20156717 chr3R 20165868 20165913 roo 12 9196 3.0 3.0 3.0 3.0 9240 chr3R 20156673 intergenic not near genes chr3R 20161293 intergenic not near genes chr3R 20165913 intergenic not near genes chr3R_12_20160001 chr3R_20160001 EF39_1-HE 2758 chr3R 20203923 20203934 chr3R 20204030 20204041 4 107 2.0 2.0 2.0 1.3 118 chr3R 20203923 intergenic not near genes chr3R 20203982 intergenic not near genes chr3R 20204041 intergenic not near genes chr3R_4_20200001 chr3R_20200001 EF39_1-HE 2759 chr3R 20205378 20205584 chr3R 20205521 20205732 25 145 0.0 0.0 0.0 25.0 354 chr3R 20205378 intron Nlg4 + chr3R 20205555 intron Nlg4 + chr3R 20205732 intron Nlg4 + chr3R_25_20205001 chr3R_20205001 EF39_1-HE 2760 chr3R 20222228 20222281 chr3R 20222337 20222390 6 109 1.5 2.0 1.8 2.1 162 chr3R 20222228 intron Nlg4 + chr3R 20222309 intron Nlg4 + chr3R 20222390 intron Nlg4 + chr3R_6_20220001 chr3R_20220001 EF39_1-HE 2761 chr3R 20245260 20245306 chr3R 20248896 20248942 F-element 10 3636 7.5 0.5 4.0 2.0 3682 chr3R 20245260 3` UTR Nlg4 + chr3R 20247101 intergenic not near genes chr3R 20248942 intergenic not near genes chr3R_10_20245001 chr3R_20245001 EF39_1-HE 2762 chr3R 20251726 20251743 chr3R 20251964 20251980 6 238 10.5 5.0 7.8 0.7 254 chr3R 20251726 intergenic not near genes chr3R 20251853 intergenic not near genes chr3R 20251980 intergenic not near genes chr3R_6_20250001 chr3R_20250001 EF39_1-HE 2763 chr3R 20266502 20266541 chr3R 20272999 20273038 Burdock 14 6497 3.0 3.5 3.2 3.3 6536 chr3R 20266502 intron cic + chr3R 20269770 intron cic + chr3R 20273038 intron cic + chr3R_14_20265001 chr3R_20265001 EF39_1-HE 2764 chr3R 20296471 20296522 chr3R 20296651 20296702 22 180 8.5 6.0 7.2 2.7 231 chr3R 20296471 exon cic + chr3R 20296586 intron cic + chr3R 20296702 intron cic + chr3R_22_20295001 chr3R_20295001 EF39_1-HE 2765 chr3R 20308173 20308213 chr3R 20308287 20308338 4 120 2.0 0.0 1.0 2.0 165 chr3R 20308173 intergenic not near genes chr3R 20308256 intergenic not near genes chr3R 20308338 intergenic not near genes chr3R_4_20305001 chr3R_20305001 EF39_1-HE 2766 chr3R 20330978 20331027 chr3R 20331490 20331539 roo 12 512 3.5 3.0 3.2 2.9 561 chr3R 20330978 intergenic Sirt2 + chr3R 20331258 intergenic Sirt2 + chr3R 20331539 intergenic not near genes chr3R_12_20330001 chr3R_20330001 EF39_1-HE 2767 chr3R 20376580 20376621 chr3R 20376695 20376739 11 115 1.5 6.5 4.0 2.2 159 chr3R 20376580 intergenic not near genes chr3R 20376660 intergenic not near genes chr3R 20376739 intergenic not near genes chr3R_11_20375001 chr3R_20375001 EF39_1-HE 2768 chr3R 20410264 20410308 chr3R 20410370 20410414 18 106 0.0 6.0 3.0 4.5 150 chr3R 20410264 intron Gfrl - chr3R 20410339 intron Gfrl - chr3R 20410414 intron Gfrl - chr3R_18_20410001 chr3R_20410001 EF39_1-HE 2769 chr3R 20411190 20411244 chr3R 20411431 20411485 17 240 2.0 4.0 3.0 4.2 295 chr3R 20411190 exon Gfrl - chr3R 20411338 intron Gfrl - chr3R 20411485 intron Gfrl - chr3R_17_20410001 chr3R_20410001 EF39_1-HE 2770 chr3R 20434818 20434863 chr3R 20435029 20435074 12 211 4.0 1.5 2.8 3.2 256 chr3R 20434818 intron Gfrl - chr3R 20434946 intron Gfrl - chr3R 20435074 intron Gfrl - chr3R_12_20430001 chr3R_20430001 EF39_1-HE 2771 chr3R 20467056 20467107 chr3R 20467158 20467209 19 102 6.5 8.0 7.2 2.3 153 chr3R 20467056 intron Gfrl - chr3R 20467132 intron Gfrl - chr3R 20467209 intron Gfrl - chr3R_19_20465001 chr3R_20465001 EF39_1-HE 2772 chr3R 20469429 20469476 chr3R 20469538 20469585 15 109 5.0 4.0 4.5 2.7 156 chr3R 20469429 intron Gfrl - chr3R 20469507 intron Gfrl - chr3R 20469585 intron Gfrl - chr3R_15_20465001 chr3R_20465001 EF39_1-HE 2773 chr3R 20475195 20475245 chr3R 20475315 20475365 9 120 1.5 1.5 1.5 3.6 170 chr3R 20475195 intron Gfrl - chr3R 20475280 intron Gfrl - chr3R 20475365 intron Gfrl - chr3R_9_20475001 chr3R_20475001 EF39_1-HE 2774 chr3R 20491773 20491800 chr3R 20491877 20491904 7 104 2.0 3.0 2.5 2.0 131 chr3R 20491773 intergenic not near genes chr3R 20491838 intergenic not near genes chr3R 20491904 intergenic not near genes chr3R_7_20490001 chr3R_20490001 EF39_1-HE 2775 chr3R 20506587 20506612 chr3R 20507415 20507441 BS 5 829 3.5 9.5 6.5 0.7 854 chr3R 20506587 intergenic Or92a + chr3R 20507014 intergenic CG4288 - chr3R 20507441 3` UTR CG4288 - chr3R_5_20505001 chr3R_20505001 EF39_1-HE 2776 chr3R 20510102 20510149 chr3R 20510237 20510285 10 135 2.0 1.5 1.8 3.6 183 chr3R 20510102 intron CG4288 - chr3R 20510194 intron CG4288 - chr3R 20510285 intron CG4288 - chr3R_10_20510001 chr3R_20510001 EF39_1-HE 2777 chr3R 20512994 20513026 chr3R 20515723 20515755 opus 6 2729 3.5 2.5 3.0 1.5 2761 chr3R 20512994 intergenic not near genes chr3R 20514374 intergenic not near genes chr3R 20515755 intergenic not near genes chr3R_6_20510001 chr3R_20510001 EF39_1-HE 2778 chr3R 20518426 20518485 chr3R 20518541 20518600 12 115 2.0 0.5 1.2 5.5 174 chr3R 20518426 intergenic not near genes chr3R 20518513 intergenic not near genes chr3R 20518600 intergenic not near genes chr3R_12_20515001 chr3R_20515001 EF39_1-HE 2779 chr3R 20657299 20657343 chr3R 20657467 20657511 6 168 2.0 0.5 1.2 2.7 212 chr3R 20657299 intron Nep4 - chr3R 20657405 intron Nep4 - chr3R 20657511 intron Nep4 - chr3R_6_20655001 chr3R_20655001 EF39_1-HE 2780 chr3R 20684197 20684241 chr3R 20684307 20684351 7 110 2.5 1.5 2.0 2.3 154 chr3R 20684197 intergenic not near genes chr3R 20684274 intergenic not near genes chr3R 20684351 intergenic not near genes chr3R_7_20680001 chr3R_20680001 EF39_1-HE 2781 chr3R 20717079 20717089 chr3R 20717188 20717196 5 107 6.0 2.0 4.0 1.0 117 chr3R 20717079 intergenic not near genes chr3R 20717138 intergenic not near genes chr3R 20717196 intergenic not near genes chr3R_5_20715001 chr3R_20715001 EF39_1-HE 2782 chr3R 20730904 20731056 chr3R 20731030 20731170 6 118 0.0 0.0 0.0 6.0 266 chr3R 20730904 intergenic not near genes chr3R 20731037 intergenic not near genes chr3R 20731170 intergenic CG31205 + chr3R_6_20730001 chr3R_20730001 EF39_1-HE 2783 chr3R 20739484 20739533 chr3R 20739737 20739786 10 253 3.5 2.0 2.8 2.6 302 chr3R 20739484 intergenic CG17267 - chr3R 20739635 intergenic CG42322 + chr3R 20739786 intergenic CG42322 + chr3R_10_20735001 chr3R_20735001 EF39_1-HE 2784 chr3R 20763781 20763833 chr3R 20763897 20763949 26 115 9.5 4.5 7.0 3.2 168 chr3R 20763781 intron Syp + chr3R 20763865 intron Syp + chr3R 20763949 intron Syp + chr3R_26_20760001 chr3R_20760001 EF39_1-HE 2785 chr3R 20789335 20789387 chr3R 20789470 20789522 33 135 11.0 12.0 11.5 2.6 187 chr3R 20789335 intron Syp + chr3R 20789428 intron Syp + chr3R 20789522 intron Syp + chr3R_33_20785001 chr3R_20785001 EF39_1-HE 2786 chr3R 20849982 20850001 chr3R 20850172 20850191 5 190 3.5 2.5 3.0 1.2 209 chr3R 20849982 intergenic not near genes chr3R 20850086 intergenic RpS30 + chr3R 20850191 intergenic RpS30 + chr3R_5_20850001 chr3R_20850001 EF39_1-HE 2787 chr3R 20854467 20854510 chr3R 20859282 20859326 Doc 13 4816 0.0 2.5 1.2 5.9 4859 chr3R 20854467 intron Ir93a - chr3R 20856896 intron Ir93a - chr3R 20859326 exon Ir93a - chr3R_13_20855001 chr3R_20855001 EF39_1-HE 2788 chr3R 20935971 20936105 chr3R 20936084 20936208 8 109 0.0 0.0 0.0 8.0 237 chr3R 20935971 intron CG31191 - chr3R 20936090 intron CG31191 - chr3R 20936208 intron CG31191 - chr3R_8_20935001 chr3R_20935001 EF39_1-HE 2789 chr3R 21049856 21049905 chr3R 21050075 21050124 5 219 3.0 3.5 3.2 1.2 268 chr3R 21049856 intergenic CG17279 - chr3R 21049990 intergenic CG17279 - chr3R 21050124 exon CG17279 - chr3R_5_21045001 chr3R_21045001 EF39_1-HE 2790 chr3R 21075083 21075138 chr3R 21075189 21075244 14 106 1.0 3.5 2.2 4.4 161 chr3R 21075083 intron dmrt93B + chr3R 21075164 intron dmrt93B + chr3R 21075244 intron dmrt93B + chr3R_14_21075001 chr3R_21075001 EF39_1-HE 2791 chr3R 21141649 21141705 chr3R 21150156 21150211 Tirant 10 8507 3.0 4.0 3.5 2.2 8562 chr3R 21141649 intron SNF4Agamma + chr3R 21145930 intron SNF4Agamma + chr3R 21150211 intron SNF4Agamma + chr3R_10_21145001 chr3R_21145001 EF39_1-HE 2792 chr3R 21154527 21154562 chr3R 21154758 21154803 4 238 0.0 0.0 0.0 4.0 276 chr3R 21154527 intron SNF4Agamma + chr3R 21154665 intron SNF4Agamma + chr3R 21154803 intron SNF4Agamma + chr3R_4_21150001 chr3R_21150001 EF39_1-HE 2793 chr3R 21245832 21245849 chr3R 21245942 21245959 4 109 4.0 2.5 3.2 1.0 127 chr3R 21245832 intergenic CG5892 + chr3R 21245896 intergenic CG5892 + chr3R 21245959 intergenic not near genes chr3R_4_21245001 chr3R_21245001 EF39_1-HE 2794 chr3R 21251749 21251777 chr3R 21251889 21251917 8 140 5.0 3.0 4.0 1.6 168 chr3R 21251749 intron ETHR + chr3R 21251833 intron ETHR + chr3R 21251917 intron ETHR + chr3R_8_21250001 chr3R_21250001 EF39_1-HE 2795 chr3R 21408526 21408822 chr3R 21408629 21408927 6 104 0.5 3.5 2.0 2.0 401 chr3R 21408526 intergenic CheB93a + chr3R 21408726 intergenic CheB93b +,CheB93a + chr3R 21408927 intergenic CheB93b + chr3R_6_21405001 chr3R_21405001 EF39_1-HE 2796 chr3R 21408825 21408867 chr3R 21408930 21408972 12 105 0.5 6.0 3.2 2.9 147 chr3R 21408825 intergenic CheB93b + chr3R 21408898 intergenic CheB93b + chr3R 21408972 intergenic CheB93b + chr3R_12_21405001 chr3R_21405001 EF39_1-HE 2797 chr3R 21411317 21411373 chr3R 21411423 21411479 12 106 3.5 3.5 3.5 2.7 162 chr3R 21411317 intron lbl - chr3R 21411398 intron lbl - chr3R 21411479 intron lbl - chr3R_12_21410001 chr3R_21410001 EF39_1-HE 2798 chr3R 21426381 21426397 chr3R 21426491 21426507 8 110 0.0 8.5 4.2 1.5 126 chr3R 21426381 intron lbl - chr3R 21426444 intron lbl - chr3R 21426507 intron lbl - chr3R_8_21425001 chr3R_21425001 EF39_1-HE 2799 chr3R 21457779 21457831 chr3R 21457891 21457943 12 112 5.5 4.0 4.8 2.1 164 chr3R 21457779 intergenic not near genes chr3R 21457861 intergenic not near genes chr3R 21457943 intergenic not near genes chr3R_12_21455001 chr3R_21455001 EF39_1-HE 2800 chr3R 21471993 21472033 chr3R 21472100 21472139 10 107 5.0 3.0 4.0 2.0 146 chr3R 21471993 intergenic not near genes chr3R 21472066 intergenic not near genes chr3R 21472139 intergenic not near genes chr3R_10_21470001 chr3R_21470001 EF39_1-HE 2801 chr3R 21519968 21520133 chr3R 21520095 21520253 19 124 2.0 1.5 1.8 6.8 285 chr3R 21519968 intergenic not near genes chr3R 21520110 intergenic not near genes chr3R 21520253 intergenic not near genes chr3R_19_21520001 chr3R_21520001 EF39_1-HE 2802 chr3R 21545581 21545621 chr3R 21545682 21545724 7 102 6.0 3.5 4.8 1.2 143 chr3R 21545581 intergenic not near genes chr3R 21545652 intergenic not near genes chr3R 21545724 intergenic not near genes chr3R_7_21545001 chr3R_21545001 EF39_1-HE 2803 chr3R 21596411 21596468 chr3R 21596514 21596571 24 103 3.5 4.5 4.0 4.8 160 chr3R 21596411 intron InR - chr3R 21596491 intron InR - chr3R 21596571 intron InR - chr3R_24_21595001 chr3R_21595001 EF39_1-HE 2804 chr3R 21608989 21609034 chr3R 21611648 21611694 NOF 8 2660 6.0 5.0 5.5 1.2 2705 chr3R 21608989 intron InR - chr3R 21610342 intron InR - chr3R 21611694 intron InR - chr3R_8_21610001 chr3R_21610001 EF39_1-HE 2805 chr3R 21624084 21624113 chr3R 21624204 21624233 10 120 6.5 5.0 5.8 1.5 149 chr3R 21624084 exon E2f - chr3R 21624158 intron E2f - chr3R 21624233 intron E2f - chr3R_10_21620001 chr3R_21620001 EF39_1-HE 2806 chr3R 21628429 21628461 chr3R 21628603 21628635 15 173 2.0 2.5 2.2 4.7 206 chr3R 21628429 intron E2f - chr3R 21628532 intron E2f - chr3R 21628635 intron E2f - chr3R_15_21625001 chr3R_21625001 EF39_1-HE 2807 chr3R 21633203 21633229 chr3R 21633314 21633340 9 111 3.5 0.0 1.8 3.2 137 chr3R 21633203 intron E2f - chr3R 21633272 intron E2f - chr3R 21633340 intron E2f - chr3R_9_21630001 chr3R_21630001 EF39_1-HE 2808 chr3R 21651217 21651267 chr3R 21651321 21651371 11 104 2.5 5.5 4.0 2.2 154 chr3R 21651217 intron E2f - chr3R 21651294 intron E2f - chr3R 21651371 intron E2f - chr3R_11_21650001 chr3R_21650001 EF39_1-HE 2809 chr3R 21662367 21662372 chr3R 21662467 21662474 5 102 0.0 0.0 0.0 5.0 107 chr3R 21662367 intron CG6353 - chr3R 21662420 intron CG6353 - chr3R 21662474 intron CG6353 - chr3R_5_21660001 chr3R_21660001 EF39_1-HE 2810 chr3R 21718171 21718200 chr3R 21718291 21718320 11 120 2.0 8.5 5.2 1.8 149 chr3R 21718171 intron CG31176 - chr3R 21718246 intron CG31176 - chr3R 21718320 exon CG31176 - chr3R_11_21715001 chr3R_21715001 EF39_1-HE 2811 chr3R 21725655 21725683 chr3R 21725817 21725845 4 162 0.0 6.0 3.0 1.0 190 chr3R 21725655 intergenic not near genes chr3R 21725750 intergenic not near genes chr3R 21725845 intergenic not near genes chr3R_4_21725001 chr3R_21725001 EF39_1-HE 2812 chr3R 21731819 21731835 chr3R 21731952 21731967 9 133 2.0 0.0 1.0 4.5 148 chr3R 21731819 intergenic not near genes chr3R 21731893 intergenic not near genes chr3R 21731967 intergenic not near genes chr3R_9_21730001 chr3R_21730001 EF39_1-HE 2813 chr3R 21761108 21761148 chr3R 21768526 21768566 mdg1 10 7418 4.0 2.5 3.2 2.4 7458 chr3R 21761108 exon CG42335 + chr3R 21764837 intron CG42335 + chr3R 21768566 exon CG42335 + chr3R_10_21760001 chr3R_21760001 EF39_1-HE 2814 chr3R 21769137 21769176 chr3R 21769242 21769281 6 104 1.0 3.0 2.0 2.0 144 chr3R 21769137 exon CG42335 + chr3R 21769209 exon CG42335 + chr3R 21769281 exon CG42335 + chr3R_6_21765001 chr3R_21765001 EF39_1-HE 2815 chr3R 21784816 21784874 chr3R 21784920 21784979 4 105 0.5 3.5 2.0 1.3 163 chr3R 21784816 3` UTR,3` UTR CASK -,CRG - chr3R 21784898 3` UTR,3` UTR CASK -,CRG - chr3R 21784979 3` UTR,3` UTR CASK -,CRG - chr3R_4_21780001 chr3R_21780001 EF39_1-HE 2816 chr3R 21944372 21944402 chr3R 21944475 21944505 10 103 9.5 3.5 6.5 1.3 133 chr3R 21944372 intergenic not near genes chr3R 21944438 intergenic not near genes chr3R 21944505 intergenic not near genes chr3R_10_21940001 chr3R_21940001 EF39_1-HE 2817 chr3R 21976533 21976574 chr3R 21976643 21976684 12 110 9.0 3.0 6.0 1.7 151 chr3R 21976533 intron Eip93F + chr3R 21976608 intron Eip93F + chr3R 21976684 intron Eip93F + chr3R_12_21975001 chr3R_21975001 EF39_1-HE 2818 chr3R 22047938 22047981 chr3R 22048043 22048086 10 105 5.5 4.0 4.8 1.7 148 chr3R 22047938 intron how + chr3R 22048012 intron how + chr3R 22048086 intron how + chr3R_10_22045001 chr3R_22045001 EF39_1-HE 2819 chr3R 22084581 22084621 chr3R 22084696 22084735 4 115 0.0 2.0 1.0 2.0 154 chr3R 22084581 intergenic not near genes chr3R 22084658 intergenic not near genes chr3R 22084735 intergenic not near genes chr3R_4_22080001 chr3R_22080001 EF39_1-HE 2820 chr3R 22091332 22091383 chr3R 22091589 22091640 7 257 1.5 1.0 1.2 3.2 308 chr3R 22091332 intron CG5778 - chr3R 22091486 intron CG5778 - chr3R 22091640 intron CG5778 - chr3R_7_22090001 chr3R_22090001 EF39_1-HE 2821 chr3R 22142203 22142227 chr3R 22142307 22142331 7 104 1.0 3.5 2.2 2.2 128 chr3R 22142203 5` UTR SKIP + chr3R 22142267 intron SKIP + chr3R 22142331 intron SKIP + chr3R_7_22140001 chr3R_22140001 EF39_1-HE 2822 chr3R 22154946 22154994 chr3R 22155060 22155108 18 114 6.5 4.0 5.2 2.9 162 chr3R 22154946 intron SKIP + chr3R 22155027 intron SKIP + chr3R 22155108 intron SKIP + chr3R_18_22155001 chr3R_22155001 EF39_1-HE 2823 chr3R 22234667 22234704 chr3R 22236012 22236049 pogo 9 1345 2.5 5.0 3.8 1.9 1382 chr3R 22234667 intron SKIP + chr3R 22235358 intron SKIP + chr3R 22236049 intron SKIP + chr3R_9_22235001 chr3R_22235001 EF39_1-HE 2824 chr3R 22239474 22239518 chr3R 22248560 22248592 roo 4 9077 2.0 1.5 1.8 1.4 9118 chr3R 22239474 intron SKIP + chr3R 22244033 intron SKIP + chr3R 22248592 intron SKIP + chr3R_4_22240001 chr3R_22240001 EF39_1-HE 2825 chr3R 22282916 22282964 chr3R 22283043 22283091 6 127 5.5 3.0 4.2 1.2 175 chr3R 22282916 intron SKIP + chr3R 22283004 intron SKIP + chr3R 22283091 intron SKIP + chr3R_6_22280001 chr3R_22280001 EF39_1-HE 2826 chr3R 22286127 22286155 chr3R 22286229 22286256 12 101 3.0 3.5 3.2 2.9 129 chr3R 22286127 intron SKIP + chr3R 22286192 intron SKIP + chr3R 22286256 intron SKIP + chr3R_12_22285001 chr3R_22285001 EF39_1-HE 2827 chr3R 22318957 22319010 chr3R 22319073 22319125 5 116 2.5 4.5 3.5 1.1 168 chr3R 22318957 5` UTR CG34377 - chr3R 22319041 intron CG34377 - chr3R 22319125 intron CG34377 - chr3R_5_22315001 chr3R_22315001 EF39_1-HE 2828 chr3R 22331036 22331050 chr3R 22331156 22331170 9 120 3.5 2.5 3.0 2.2 134 chr3R 22331036 intergenic CG33721 +,CG7080 + chr3R 22331103 exon CG33721 + chr3R 22331170 intron CG33721 + chr3R_9_22330001 chr3R_22330001 EF39_1-HE 2829 chr3R 22346158 22346213 chr3R 22346270 22346318 4 110 2.5 5.0 3.8 0.8 160 chr3R 22346158 intergenic not near genes chr3R 22346238 intergenic not near genes chr3R 22346318 intergenic not near genes chr3R_4_22345001 chr3R_22345001 EF39_1-HE 2830 chr3R 22433082 22433097 chr3R 22433203 22433223 10 126 5.5 4.0 4.8 1.7 141 chr3R 22433082 intron CG13847 - chr3R 22433152 intron CG13847 - chr3R 22433223 intron CG13847 - chr3R_10_22430001 chr3R_22430001 EF39_1-HE 2831 chr3R 22437785 22437818 chr3R 22437901 22437934 5 116 0.0 4.0 2.0 1.7 149 chr3R 22437785 intergenic not near genes chr3R 22437860 intergenic not near genes chr3R 22437934 intergenic not near genes chr3R_5_22435001 chr3R_22435001 EF39_1-HE 2832 chr3R 22450519 22450570 chr3R 22453185 22453236 NOF 16 2663 5.0 6.0 5.5 2.5 2717 chr3R 22450519 intron CG34376 + chr3R 22451878 intron CG34376 + chr3R 22453236 intron CG34376 + chr3R_16_22450001 chr3R_22450001 EF39_1-HE 2833 chr3R 22500000 22500045 chr3R 22500134 22500179 9 134 1.5 3.0 2.2 2.8 179 chr3R 22500000 intron Octbeta1R + chr3R 22500090 intron Octbeta1R + chr3R 22500179 intron Octbeta1R + chr3R_9_22500001 chr3R_22500001 EF39_1-HE 2834 chr3R 22531687 22531717 chr3R 22531802 22531832 6 115 0.0 4.0 2.0 2.0 145 chr3R 22531687 intron CG33093 - chr3R 22531760 exon CG33093 - chr3R 22531832 exon CG33093 - chr3R_6_22530001 chr3R_22530001 EF39_1-HE 2835 chr3R 22591638 22591685 chr3R 22591744 22591791 9 106 6.0 2.5 4.2 1.7 153 chr3R 22591638 intron Efa6 + chr3R 22591714 intron Efa6 + chr3R 22591791 intron Efa6 + chr3R_9_22590001 chr3R_22590001 EF39_1-HE 2836 chr3R 22606185 22606201 chr3R 22606290 22606306 5 105 5.5 4.5 5.0 0.8 121 chr3R 22606185 intron Efa6 + chr3R 22606246 intron Efa6 + chr3R 22606306 intron Efa6 + chr3R_5_22605001 chr3R_22605001 EF39_1-HE 2837 chr3R 22636625 22636682 chr3R 22636728 22636785 9 103 5.0 0.5 2.8 2.4 160 chr3R 22636625 intron loco - chr3R 22636705 intron loco - chr3R 22636785 intron loco - chr3R_9_22635001 chr3R_22635001 EF39_1-HE 2838 chr3R 22645021 22645037 chr3R 22645151 22645167 6 130 5.5 5.0 5.2 1.0 146 chr3R 22645021 intron wake + chr3R 22645094 intron wake + chr3R 22645167 intron wake + chr3R_6_22645001 chr3R_22645001 EF39_1-HE 2839 chr3R 22672290 22672326 chr3R 22672409 22672445 7 119 2.0 7.0 4.5 1.3 155 chr3R 22672290 intron wake + chr3R 22672368 intron wake + chr3R 22672445 intron wake + chr3R_7_22670001 chr3R_22670001 EF39_1-HE 2840 chr3R 22818109 22818128 chr3R 22818217 22818219 7 105 8.5 7.0 7.8 0.8 110 chr3R 22818109 intergenic not near genes chr3R 22818164 intergenic not near genes chr3R 22818219 intergenic not near genes chr3R_7_22815001 chr3R_22815001 EF39_1-HE 2841 chr3R 22818129 22818154 chr3R 22818215 22818261 6 102 7.0 7.0 7.0 0.8 132 chr3R 22818129 intergenic not near genes chr3R 22818195 intergenic not near genes chr3R 22818261 intergenic not near genes chr3R_6_22815001 chr3R_22815001 EF39_1-HE 2842 chr3R 22827394 22827443 chr3R 22827495 22827545 17 102 2.5 6.0 4.2 3.3 151 chr3R 22827394 intergenic CR44350 - chr3R 22827470 intergenic CR44350 - chr3R 22827545 intergenic CR44350 - chr3R_17_22825001 chr3R_22825001 EF39_1-HE 2843 chr3R 22834438 22834495 chr3R 22834540 22834593 17 102 4.5 3.5 4.0 3.4 155 chr3R 22834438 intergenic not near genes chr3R 22834516 intergenic not near genes chr3R 22834593 intergenic not near genes chr3R_17_22830001 chr3R_22830001 EF39_1-HE 2844 chr3R 22837026 22837080 chr3R 22837336 22837390 10 310 1.0 0.0 0.5 6.7 364 chr3R 22837026 intergenic not near genes chr3R 22837208 intergenic not near genes chr3R 22837390 intergenic not near genes chr3R_10_22835001 chr3R_22835001 EF39_1-HE 2845 chr3R 22871407 22871460 chr3R 22871566 22871619 15 159 5.0 4.0 4.5 2.7 212 chr3R 22871407 intergenic not near genes chr3R 22871513 intergenic not near genes chr3R 22871619 intergenic not near genes chr3R_15_22870001 chr3R_22870001 EF39_1-HE 2846 chr3R 22881214 22881232 chr3R 22884945 22884963 Doc 5 3731 2.0 4.0 3.0 1.2 3749 chr3R 22881214 intergenic not near genes chr3R 22883088 intergenic not near genes chr3R 22884963 intergenic not near genes chr3R_5_22880001 chr3R_22880001 EF39_1-HE 2847 chr3R 22905336 22905381 chr3R 22905802 22905847 9 466 2.5 5.0 3.8 1.9 511 chr3R 22905336 intron klg + chr3R 22905592 intron klg + chr3R 22905847 intron klg + chr3R_9_22905001 chr3R_22905001 EF39_1-HE 2848 chr3R 22928458 22928503 chr3R 22928591 22928634 9 129 2.0 5.0 3.5 2.0 176 chr3R 22928458 intron klg + chr3R 22928546 intron klg + chr3R 22928634 intron klg + chr3R_9_22925001 chr3R_22925001 EF39_1-HE 2849 chr3R 22944901 22944953 chr3R 22945006 22945057 8 104 0.0 4.5 2.2 2.5 156 chr3R 22944901 intron klg + chr3R 22944979 intron klg + chr3R 22945057 intron klg + chr3R_8_22940001 chr3R_22940001 EF39_1-HE 2850 chr3R 22974259 22974306 chr3R 22974369 22974416 11 110 0.0 3.0 1.5 4.4 157 chr3R 22974259 intergenic not near genes chr3R 22974338 intergenic not near genes chr3R 22974416 intergenic not near genes chr3R_11_22970001 chr3R_22970001 EF39_1-HE 2851 chr3R 23035157 23035206 chr3R 23035271 23035320 15 113 3.5 2.0 2.8 3.9 163 chr3R 23035157 intron CG13833 - chr3R 23035238 intron CG13833 - chr3R 23035320 intron CG13833 - chr3R_15_23035001 chr3R_23035001 EF39_1-HE 2852 chr3R 23039318 23039373 chr3R 23039420 23039476 12 102 6.5 4.0 5.2 1.9 158 chr3R 23039318 intergenic not near genes chr3R 23039397 intergenic not near genes chr3R 23039476 intergenic not near genes chr3R_12_23035001 chr3R_23035001 EF39_1-HE 2853 chr3R 23070634 23070662 chr3R 23070740 23070773 5 106 4.5 0.0 2.2 1.6 139 chr3R 23070634 3` UTR CG13830 - chr3R 23070704 3` UTR CG13830 - chr3R 23070773 3` UTR CG13830 - chr3R_5_23070001 chr3R_23070001 EF39_1-HE 2854 chr3R 23100391 23100439 chr3R 23100498 23100546 12 106 5.5 2.0 3.8 2.5 155 chr3R 23100391 intron,exon CG13830 -,CG6738 + chr3R 23100468 intron,exon CG13830 -,CG6738 + chr3R 23100546 intron,exon CG13830 -,CG6738 + chr3R_12_23100001 chr3R_23100001 EF39_1-HE 2855 chr3R 23179692 23179725 chr3R 23179821 23179854 4 129 0.0 7.5 3.8 0.8 162 chr3R 23179692 intron Irk1 + chr3R 23179773 intron Irk1 + chr3R 23179854 intron Irk1 + chr3R_4_23175001 chr3R_23175001 EF39_1-HE 2856 chr3R 23182665 23182686 chr3R 23182774 23182794 4 109 5.0 2.5 3.8 0.8 129 chr3R 23182665 intron Irk1 + chr3R 23182730 intron Irk1 + chr3R 23182794 intron Irk1 + chr3R_4_23180001 chr3R_23180001 EF39_1-HE 2857 chr3R 23185974 23186022 chr3R 23186091 23186139 8 117 1.0 3.5 2.2 2.5 165 chr3R 23185974 intergenic Irk1 +,cnc - chr3R 23186056 intergenic cnc -,Irk1 + chr3R 23186139 intergenic cnc -,Irk1 + chr3R_8_23185001 chr3R_23185001 EF39_1-HE 2858 chr3R 23319659 23319674 chr3R 23319763 23319778 5 104 0.0 5.0 2.5 1.4 119 chr3R 23319659 intron pnt - chr3R 23319718 intron pnt - chr3R 23319778 intron pnt - chr3R_5_23315001 chr3R_23315001 EF39_1-HE 2859 chr3R 23324007 23324057 chr3R 23324119 23324169 15 112 7.5 7.5 7.5 1.8 162 chr3R 23324007 intron pnt - chr3R 23324088 intron pnt - chr3R 23324169 intron pnt - chr3R_15_23320001 chr3R_23320001 EF39_1-HE 2860 chr3R 23335417 23335452 chr3R 23335521 23335542 5 100 8.5 2.5 5.5 0.8 125 chr3R 23335417 intron pnt - chr3R 23335480 intron pnt - chr3R 23335542 intron pnt - chr3R_5_23335001 chr3R_23335001 EF39_1-HE 2861 chr3R 23558372 23558429 chr3R 23560179 23560236 Bari1 15 1807 6.0 1.5 3.8 3.1 1864 chr3R 23558372 intron beat-IV + chr3R 23559304 intron beat-IV + chr3R 23560236 intron beat-IV + chr3R_15_23555001 chr3R_23555001 EF39_1-HE 2862 chr3R 23627526 23627639 chr3R 23627629 23627743 8 108 0.0 0.0 0.0 8.0 217 chr3R 23627526 intron CG31145 - chr3R 23627634 intron CG31145 - chr3R 23627743 intron CG31145 - chr3R_8_23625001 chr3R_23625001 EF39_1-HE 2863 chr3R 23629797 23629850 chr3R 23629902 23629955 22 105 3.5 7.0 5.2 3.5 158 chr3R 23629797 intron CG31145 - chr3R 23629876 intron CG31145 - chr3R 23629955 intron CG31145 - chr3R_22_23625001 chr3R_23625001 EF39_1-HE 2864 chr3R 23673590 23673643 chr3R 23673725 23673770 7 136 0.5 1.5 1.0 3.5 180 chr3R 23673590 intergenic not near genes chr3R 23673680 intergenic not near genes chr3R 23673770 intergenic not near genes chr3R_7_23670001 chr3R_23670001 EF39_1-HE 2865 chr3R 23678524 23678563 chr3R 23678620 23678669 5 104 3.0 0.0 1.5 2.0 145 chr3R 23678524 intergenic CG13822 +,CG10157 + chr3R 23678596 intergenic CG13822 +,CG10157 + chr3R 23678669 intergenic CG10157 +,CG13822 + chr3R_5_23675001 chr3R_23675001 EF39_1-HE 2866 chr3R 23682832 23682872 chr3R 23682960 23682993 18 126 4.5 5.0 4.8 3.1 161 chr3R 23682832 exon CG16710 + chr3R 23682912 exon CG16710 + chr3R 23682993 exon CG16710 + chr3R_18_23680001 chr3R_23680001 EF39_1-HE 2867 chr3R 23684670 23684722 chr3R 23685182 23685231 roo 22 512 6.5 5.0 5.8 3.2 561 chr3R 23684670 exon CG18754 + chr3R 23684950 intron CG18754 + chr3R 23685231 exon CG18754 + chr3R_22_23680001 chr3R_23680001 EF39_1-HE 2868 chr3R 23720225 23720266 chr3R 23720464 23720505 13 238 2.5 5.0 3.8 2.7 280 chr3R 23720225 exon CG10232 - chr3R 23720365 exon CG10232 - chr3R 23720505 exon CG10232 - chr3R_13_23720001 chr3R_23720001 EF39_1-HE 2869 chr3R 23767322 23767378 chr3R 23767427 23767483 4 105 2.0 2.0 2.0 1.3 161 chr3R 23767322 exon CG10214 - chr3R 23767402 5` UTR CG10214 - chr3R 23767483 5` UTR CG10214 - chr3R_4_23765001 chr3R_23765001 EF39_1-HE 2870 chr3R 23829799 23829839 chr3R 23829908 23829950 14 111 5.5 4.0 4.8 2.4 151 chr3R 23829799 intron CG34355 + chr3R 23829874 intron CG34355 + chr3R 23829950 intron CG34355 + chr3R_14_23825001 chr3R_23825001 EF39_1-HE 2871 chr3R 23832319 23832335 chr3R 23832455 23832471 5 136 4.5 8.5 6.5 0.7 152 chr3R 23832319 intron CG34355 + chr3R 23832395 intron CG34355 + chr3R 23832471 intron CG34355 + chr3R_5_23830001 chr3R_23830001 EF39_1-HE 2872 chr3R 23835387 23835436 chr3R 23844563 23844610 roo 6 9175 4.0 0.5 2.2 1.9 9223 chr3R 23835387 intron CG34355 + chr3R 23839998 intron CG34355 + chr3R 23844610 intron CG34355 + chr3R_6_23835001 chr3R_23835001 EF39_1-HE 2873 chr3R 23851066 23851087 chr3R 23858759 23858780 opus 4 7693 2.5 8.0 5.2 0.6 7714 chr3R 23851066 3` UTR CG34355 + chr3R 23854923 intergenic not near genes chr3R 23858780 intergenic not near genes chr3R_4_23850001 chr3R_23850001 EF39_1-HE 2874 chr3R 23873936 23873966 chr3R 23874066 23874096 23 128 8.0 8.5 8.2 2.5 160 chr3R 23873936 intron Pli - chr3R 23874016 intron Pli - chr3R 23874096 intron Pli - chr3R_23_23870001 chr3R_23870001 EF39_1-HE 2875 chr3R 23888066 23888112 chr3R 23888178 23888223 11 112 5.5 4.5 5.0 1.8 157 chr3R 23888066 intron Pli - chr3R 23888144 intron Pli - chr3R 23888223 intron Pli - chr3R_11_23885001 chr3R_23885001 EF39_1-HE 2876 chr3R 23907765 23907820 chr3R 23907879 23907927 12 113 1.5 2.0 1.8 4.3 162 chr3R 23907765 intron sba - chr3R 23907846 intron sba - chr3R 23907927 intron sba - chr3R_12_23905001 chr3R_23905001 EF39_1-HE 2877 chr3R 23944884 23944934 chr3R 23944995 23945045 21 111 3.5 5.5 4.5 3.8 161 chr3R 23944884 intron CG12268 - chr3R 23944964 intron CG12268 - chr3R 23945045 exon CG12268 - chr3R_21_23940001 chr3R_23940001 EF39_1-HE 2878 chr3R 24004255 24004271 chr3R 24004363 24004379 5 108 0.5 3.5 2.0 1.7 124 chr3R 24004255 intron KrT95D - chr3R 24004317 intron KrT95D - chr3R 24004379 intron KrT95D - chr3R_5_24000001 chr3R_24000001 EF39_1-HE 2879 chr3R 24011646 24011673 chr3R 24011755 24011782 9 108 2.0 8.0 5.0 1.5 136 chr3R 24011646 intron KrT95D - chr3R 24011714 intron KrT95D - chr3R 24011782 intron KrT95D - chr3R_9_24010001 chr3R_24010001 EF39_1-HE 2880 chr3R 24072064 24072074 chr3R 24072527 24072538 jockey 6 464 0.5 0.0 0.2 5.0 474 chr3R 24072064 intron 4EHP - chr3R 24072301 intron 4EHP - chr3R 24072538 intron 4EHP - chr3R_6_24070001 chr3R_24070001 EF39_1-HE 2881 chr3R 24074541 24074586 chr3R 24074643 24074688 4 102 7.0 3.0 5.0 0.7 147 chr3R 24074541 intron 4EHP - chr3R 24074614 intron 4EHP - chr3R 24074688 intron 4EHP - chr3R_4_24070001 chr3R_24070001 EF39_1-HE 2882 chr3R 24076894 24076939 chr3R 24078387 24078423 hobo 12 1492 8.0 4.5 6.2 1.7 1529 chr3R 24076894 intron 4EHP - chr3R 24077658 intron 4EHP - chr3R 24078423 intron 4EHP - chr3R_12_24075001 chr3R_24075001 EF39_1-HE 2883 chr3R 24086231 24086278 chr3R 24086337 24086384 13 106 2.0 4.0 3.0 3.2 153 chr3R 24086231 intron 4EHP - chr3R 24086308 intron 4EHP - chr3R 24086384 intron 4EHP - chr3R_13_24085001 chr3R_24085001 EF39_1-HE 2884 chr3R 24096154 24096196 chr3R 24096278 24096320 15 124 3.5 5.0 4.2 2.9 166 chr3R 24096154 intron 4EHP - chr3R 24096237 intron 4EHP - chr3R 24096320 intron 4EHP - chr3R_15_24095001 chr3R_24095001 EF39_1-HE 2885 chr3R 24113942 24113965 chr3R 24114046 24114069 7 104 1.0 3.0 2.0 2.3 127 chr3R 24113942 intron Rootletin + chr3R 24114006 intron Rootletin + chr3R 24114069 intron,3` UTR Rootletin +,CG13607 - chr3R_7_24110001 chr3R_24110001 EF39_1-HE 2886 chr3R 24228847 24228896 chr3R 24229001 24229050 17 153 4.0 5.0 4.5 3.1 203 chr3R 24228847 3` UTR Spase22-23 - chr3R 24228948 3` UTR Spase22-23 - chr3R 24229050 3` UTR,intron Spase22-23 -,Acp95EF + chr3R_17_24225001 chr3R_24225001 EF39_1-HE 2887 chr3R 24282462 24282494 chr3R 24282571 24282603 11 108 6.0 11.0 8.5 1.2 141 chr3R 24282462 intergenic CR45662 - chr3R 24282532 intergenic CR45662 - chr3R 24282603 intergenic CR45662 - chr3R_11_24280001 chr3R_24280001 EF39_1-HE 2888 chr3R 24382647 24382688 chr3R 24382854 24382895 5 206 3.0 0.0 1.5 2.0 248 chr3R 24382647 intergenic CG17780 - chr3R 24382771 intergenic CG17780 - chr3R 24382895 intergenic CG17780 - chr3R_5_24380001 chr3R_24380001 EF39_1-HE 2889 chr3R 24434260 24434309 chr3R 24434368 24434417 13 108 0.0 6.0 3.0 3.2 157 chr3R 24434260 intron nAChRalpha1 - chr3R 24434338 intron nAChRalpha1 - chr3R 24434417 intron nAChRalpha1 - chr3R_13_24430001 chr3R_24430001 EF39_1-HE 2890 chr3R 24475054 24475100 chr3R 24475186 24475232 12 132 5.0 3.0 4.0 2.4 178 chr3R 24475054 intergenic not near genes chr3R 24475143 intergenic not near genes chr3R 24475232 intergenic not near genes chr3R_12_24475001 chr3R_24475001 EF39_1-HE 2891 chr3R 24491603 24491661 chr3R 24491706 24491765 11 103 6.0 0.5 3.2 2.6 162 chr3R 24491603 intergenic nAChRalpha2 + chr3R 24491684 intergenic not near genes chr3R 24491765 intergenic not near genes chr3R_11_24490001 chr3R_24490001 EF39_1-HE 2892 chr3R 24493266 24493311 chr3R 24493522 24493566 BS 9 255 5.5 7.0 6.2 1.2 300 chr3R 24493266 intergenic not near genes chr3R 24493416 intergenic not near genes chr3R 24493566 intergenic not near genes chr3R_9_24490001 chr3R_24490001 EF39_1-HE 2893 chr3R 24548533 24548586 chr3R 24548643 24548692 17 110 3.5 4.5 4.0 3.4 159 chr3R 24548533 intron Esyt2 + chr3R 24548612 intron Esyt2 + chr3R 24548692 intron Esyt2 + chr3R_17_24545001 chr3R_24545001 EF39_1-HE 2894 chr3R 24667580 24667621 chr3R 24667683 24667697 7 99 3.5 0.0 1.8 2.5 117 chr3R 24667580 intron slo + chr3R 24667638 intron slo + chr3R 24667697 intron slo + chr3R_7_24665001 chr3R_24665001 EF39_1-HE 2895 chr3R 24670158 24670195 chr3R 24670269 24670306 14 110 2.5 8.0 5.2 2.3 148 chr3R 24670158 intron slo + chr3R 24670232 intron slo + chr3R 24670306 intron slo + chr3R_14_24670001 chr3R_24670001 EF39_1-HE 2896 chr3R 24730076 24730094 chr3R 24732480 24732498 Doc 4 2404 3.0 0.0 1.5 1.6 2422 chr3R 24730076 intron tok + chr3R 24731287 intron tok + chr3R 24732498 intron tok + chr3R_4_24730001 chr3R_24730001 EF39_1-HE 2897 chr3R 24765505 24765561 chr3R 24765612 24765668 18 106 4.5 6.0 5.2 2.9 163 chr3R 24765505 intergenic AstA - chr3R 24765586 intergenic not near genes chr3R 24765668 intergenic not near genes chr3R_18_24765001 chr3R_24765001 EF39_1-HE 2898 chr3R 24811892 24811917 chr3R 24812012 24812037 4 120 4.0 2.5 3.2 1.0 145 chr3R 24811892 intron CG5807 - chr3R 24811964 intron CG5807 - chr3R 24812037 intron CG5807 - chr3R_4_24810001 chr3R_24810001 EF39_1-HE 2899 chr3R 24927115 24927144 chr3R 24931932 24931961 Doc 7 4817 3.5 3.5 3.5 1.6 4846 chr3R 24927115 intergenic Trf4-2 + chr3R 24929538 intergenic not near genes chr3R 24931961 intergenic CG11771 + chr3R_7_24925001 chr3R_24925001 EF39_1-HE 2900 chr3R 24973931 24973974 chr3R 24974033 24974076 7 102 6.0 4.0 5.0 1.2 145 chr3R 24973931 intergenic not near genes chr3R 24974004 intergenic not near genes chr3R 24974076 intergenic not near genes chr3R_7_24970001 chr3R_24970001 EF39_1-HE 2901 chr3R 25027515 25027563 chr3R 25027754 25027802 12 239 3.5 2.5 3.0 3.0 287 chr3R 25027515 intron Hr96 + chr3R 25027658 intron Hr96 + chr3R 25027802 intron Hr96 + chr3R_12_25025001 chr3R_25025001 EF39_1-HE 2902 chr3R 25077877 25077905 chr3R 25078141 25078169 6 264 4.5 7.5 6.0 0.9 292 chr3R 25077877 intergenic not near genes chr3R 25078023 intergenic not near genes chr3R 25078169 intergenic not near genes chr3R_6_25075001 chr3R_25075001 EF39_1-HE 2903 chr3R 25078353 25078400 chr3R 25078465 25078511 16 112 2.5 3.5 3.0 4.0 158 chr3R 25078353 intergenic not near genes chr3R 25078432 intergenic not near genes chr3R 25078511 intergenic not near genes chr3R_16_25075001 chr3R_25075001 EF39_1-HE 2904 chr3R 25086035 25086044 chr3R 25086137 25086146 5 102 6.5 5.5 6.0 0.7 111 chr3R 25086035 intergenic not near genes chr3R 25086090 intergenic not near genes chr3R 25086146 intergenic not near genes chr3R_5_25085001 chr3R_25085001 EF39_1-HE 2905 chr3R 25166337 25166376 chr3R 25166439 25166478 13 102 10.0 3.0 6.5 1.7 141 chr3R 25166337 intergenic not near genes chr3R 25166408 intergenic not near genes chr3R 25166478 intergenic not near genes chr3R_13_25165001 chr3R_25165001 EF39_1-HE 2906 chr3R 25279913 25279959 chr3R 25280015 25280061 8 102 2.5 5.0 3.8 1.7 148 chr3R 25279913 intergenic CG10514 - chr3R 25279987 intergenic CG10514 - chr3R 25280061 intergenic CG10514 - chr3R_8_25275001 chr3R_25275001 EF39_1-HE 2907 chr3R 25284695 25284731 chr3R 25285308 25285344 10 613 2.0 1.0 1.5 4.0 649 chr3R 25284695 exon CG31300 + chr3R 25285020 exon CG31300 + chr3R 25285344 intergenic CG31300 +,CG31104 + chr3R_10_25285001 chr3R_25285001 EF39_1-HE 2908 chr3R 25300643 25300692 chr3R 25300784 25300834 10 142 5.5 2.0 3.8 2.1 191 chr3R 25300643 intergenic CG13659 + chr3R 25300738 intergenic CG13659 + chr3R 25300834 intergenic CG13659 + chr3R_10_25300001 chr3R_25300001 EF39_1-HE 2909 chr3R 25324368 25324377 chr3R 25328959 25328968 Doc 5 4591 3.5 7.5 5.5 0.8 4600 chr3R 25324368 exon CHKov1 - chr3R 25326668 intron CHKov1 - chr3R 25328968 exon CHKov1 - chr3R_5_25325001 chr3R_25325001 EF39_1-HE 2910 chr3R 25368457 25368479 chr3R 25368601 25368623 5 144 3.5 0.0 1.8 1.8 166 chr3R 25368457 intron Fur1 - chr3R 25368540 intron Fur1 - chr3R 25368623 intron Fur1 - chr3R_5_25365001 chr3R_25365001 EF39_1-HE 2911 chr3R 25374832 25374854 chr3R 25374936 25374958 4 104 2.5 7.0 4.8 0.7 126 chr3R 25374832 intron Fur1 - chr3R 25374895 intron Fur1 - chr3R 25374958 intron Fur1 - chr3R_4_25370001 chr3R_25370001 EF39_1-HE 2912 chr3R 25410455 25410507 chr3R 25410882 25410934 6 427 2.0 3.0 2.5 1.7 479 chr3R 25410455 intron Fur1 - chr3R 25410694 intron Fur1 - chr3R 25410934 intron Fur1 - chr3R_6_25410001 chr3R_25410001 EF39_1-HE 2913 chr3R 25426029 25426050 chr3R 25426132 25426153 8 103 5.5 8.0 6.8 1.0 124 chr3R 25426029 intron Fur1 - chr3R 25426091 intron Fur1 - chr3R 25426153 intron Fur1 - chr3R_8_25425001 chr3R_25425001 EF39_1-HE 2914 chr3R 25436464 25436521 chr3R 25436584 25436641 12 116 2.5 3.5 3.0 3.0 177 chr3R 25436464 intron Fur1 - chr3R 25436552 intron Fur1 - chr3R 25436641 intron Fur1 - chr3R_12_25435001 chr3R_25435001 EF39_1-HE 2915 chr3R 25443435 25443484 chr3R 25443570 25443587 17 133 4.5 2.0 3.2 4.0 152 chr3R 25443435 intron Fur1 - chr3R 25443511 intron Fur1 - chr3R 25443587 intron Fur1 - chr3R_17_25440001 chr3R_25440001 EF39_1-HE 2916 chr3R 25514413 25514450 chr3R 25514520 25514556 4 107 0.0 6.0 3.0 1.0 143 chr3R 25514413 intergenic not near genes chr3R 25514484 intergenic not near genes chr3R 25514556 intergenic not near genes chr3R_4_25510001 chr3R_25510001 EF39_1-HE 2917 chr3R 25528013 25528040 chr3R 25528142 25528169 8 129 9.0 2.5 5.8 1.2 156 chr3R 25528013 intron msi + chr3R 25528091 intron msi + chr3R 25528169 intron msi + chr3R_8_25525001 chr3R_25525001 EF39_1-HE 2918 chr3R 25604090 25604104 chr3R 25604199 25604220 5 115 3.0 3.0 3.0 1.2 130 chr3R 25604090 3` UTR,intron msi +,ymp - chr3R 25604155 3` UTR,intron msi +,ymp - chr3R 25604220 3` UTR,intron msi +,ymp - chr3R_5_25600001 chr3R_25600001 EF39_1-HE 2919 chr3R 25631634 25631688 chr3R 25631737 25631791 16 103 5.5 3.0 4.2 3.1 157 chr3R 25631634 intergenic not near genes chr3R 25631712 intergenic not near genes chr3R 25631791 intergenic not near genes chr3R_16_25630001 chr3R_25630001 EF39_1-HE 2920 chr3R 25669040 25669084 chr3R 25669159 25669204 18 120 4.0 4.5 4.2 3.5 164 chr3R 25669040 intron Lgr3 + chr3R 25669122 intron Lgr3 + chr3R 25669204 exon Lgr3 + chr3R_18_25665001 chr3R_25665001 EF39_1-HE 2921 chr3R 25691666 25691725 chr3R 25692141 25692200 6 475 3.5 3.5 3.5 1.3 534 chr3R 25691666 intergenic not near genes chr3R 25691933 intergenic not near genes chr3R 25692200 intergenic not near genes chr3R_6_25690001 chr3R_25690001 EF39_1-HE 2922 chr3R 25765853 25765901 chr3R 25765958 25766005 17 104 9.5 5.5 7.5 2.0 152 chr3R 25765853 intergenic not near genes chr3R 25765929 intergenic not near genes chr3R 25766005 intergenic not near genes chr3R_17_25765001 chr3R_25765001 EF39_1-HE 2923 chr3R 25767660 25767674 chr3R 25767768 25767782 4 108 8.0 1.5 4.8 0.7 122 chr3R 25767660 intergenic not near genes chr3R 25767721 intergenic not near genes chr3R 25767782 intergenic not near genes chr3R_4_25765001 chr3R_25765001 EF39_1-HE 2924 chr3R 25832673 25832720 chr3R 25841881 25841927 roo 12 9208 5.0 5.0 5.0 2.0 9254 chr3R 25832673 exon alpha4GT2 + chr3R 25837300 intron alpha4GT2 + chr3R 25841927 exon alpha4GT2 + chr3R_12_25835001 chr3R_25835001 EF39_1-HE 2925 chr3R 25843619 25843667 chr3R 25843775 25843822 16 156 3.0 2.0 2.5 4.6 203 chr3R 25843619 intergenic CR45653 + chr3R 25843720 intergenic CR45653 + chr3R 25843822 intergenic CR45653 + chr3R_16_25840001 chr3R_25840001 EF39_1-HE 2926 chr3R 25861859 25861911 chr3R 25861970 25862022 13 111 2.0 0.5 1.2 5.9 163 chr3R 25861859 intron CG5890 + chr3R 25861940 intron CG5890 + chr3R 25862022 intron CG5890 + chr3R_13_25860001 chr3R_25860001 EF39_1-HE 2927 chr3R 25869184 25869226 chr3R 25869404 25869446 13 220 4.0 3.5 3.8 2.7 262 chr3R 25869184 intron CG5890 + chr3R 25869315 intron CG5890 + chr3R 25869446 intron CG5890 + chr3R_13_25865001 chr3R_25865001 EF39_1-HE 2928 chr3R 25905611 25905651 chr3R 25905757 25905797 7 146 5.5 2.0 3.8 1.5 186 chr3R 25905611 intron CR43259 - chr3R 25905704 intron CR43259 - chr3R 25905797 intron CR43259 - chr3R_7_25905001 chr3R_25905001 EF39_1-HE 2929 chr3R 25923748 25923793 chr3R 25923915 25923960 13 166 2.0 3.0 2.5 3.7 212 chr3R 25923748 3` UTR CCAP-R - chr3R 25923854 3` UTR CCAP-R - chr3R 25923960 3` UTR CCAP-R - chr3R_13_25920001 chr3R_25920001 EF39_1-HE 2930 chr3R 26030832 26030865 chr3R 26030939 26030956 16 105 11.5 16.0 13.8 1.1 124 chr3R 26030832 intergenic not near genes chr3R 26030894 intergenic not near genes chr3R 26030956 intergenic not near genes chr3R_16_26030001 chr3R_26030001 EF39_1-HE 2931 chr3R 26038348 26038395 chr3R 26038460 26038506 10 112 2.5 2.5 2.5 2.9 158 chr3R 26038348 intergenic E(spl)m7-HLH + chr3R 26038427 intergenic E(spl)m7-HLH + chr3R 26038506 intergenic E(spl)m7-HLH + chr3R_10_26035001 chr3R_26035001 EF39_1-HE 2932 chr3R 26038982 26038997 chr3R 26039145 26039160 5 163 2.0 1.0 1.5 2.0 178 chr3R 26038982 intergenic not near genes chr3R 26039071 intergenic not near genes chr3R 26039160 intergenic not near genes chr3R_5_26035001 chr3R_26035001 EF39_1-HE 2933 chr3R 26088778 26088824 chr3R 26088880 26088926 10 102 3.5 5.5 4.5 1.8 148 chr3R 26088778 intron dys - chr3R 26088852 intron dys - chr3R 26088926 intron dys - chr3R_10_26085001 chr3R_26085001 EF39_1-HE 2934 chr3R 26124614 26124669 chr3R 26124846 26124901 17 232 0.5 2.5 1.5 6.8 287 chr3R 26124614 exon CG31324 + chr3R 26124758 intron CG31324 + chr3R 26124901 intron CG31324 + chr3R_17_26120001 chr3R_26120001 EF39_1-HE 2935 chr3R 26142535 26142584 chr3R 26142641 26142690 6 106 1.5 4.0 2.8 1.6 155 chr3R 26142535 intergenic not near genes chr3R 26142612 intergenic not near genes chr3R 26142690 intergenic not near genes chr3R_6_26140001 chr3R_26140001 EF39_1-HE 2936 chr3R 26156627 26156648 chr3R 26156732 26156753 4 105 6.5 3.5 5.0 0.7 126 chr3R 26156627 intergenic not near genes chr3R 26156690 intergenic not near genes chr3R 26156753 intergenic not near genes chr3R_4_26155001 chr3R_26155001 EF39_1-HE 2937 chr3R 26157733 26157774 chr3R 26157832 26157881 7 106 3.5 1.0 2.2 2.2 148 chr3R 26157733 intergenic not near genes chr3R 26157807 intergenic not near genes chr3R 26157881 intergenic not near genes chr3R_7_26155001 chr3R_26155001 EF39_1-HE 2938 chr3R 26203120 26203172 chr3R 26203245 26203297 19 125 5.0 4.0 4.5 3.5 177 chr3R 26203120 intron CR44320 + chr3R 26203208 intron CR44320 + chr3R 26203297 intron CR44320 + chr3R_19_26200001 chr3R_26200001 EF39_1-HE 2939 chr3R 26235483 26235518 chr3R 26235591 26235626 6 108 0.5 5.0 2.8 1.6 143 chr3R 26235483 5` UTR CR42745 + chr3R 26235554 5` UTR CR42745 + chr3R 26235626 intron CR42745 + chr3R_6_26235001 chr3R_26235001 EF39_1-HE 2940 chr3R 26241686 26241733 chr3R 26241799 26241846 14 113 2.5 5.0 3.8 2.9 160 chr3R 26241686 intron CR42745 + chr3R 26241766 intron CR42745 + chr3R 26241846 intron CR42745 + chr3R_14_26240001 chr3R_26240001 EF39_1-HE 2941 chr3R 26243995 26244049 chr3R 26244110 26244164 18 114 4.5 4.5 4.5 3.3 169 chr3R 26243995 intron CR42745 + chr3R 26244080 intron CR42745 + chr3R 26244164 intron CR42745 + chr3R_18_26240001 chr3R_26240001 EF39_1-HE 2942 chr3R 26248751 26248805 chr3R 26248854 26248908 17 102 3.5 6.0 4.8 2.9 157 chr3R 26248751 intron CR42745 + chr3R 26248830 intron CR42745 + chr3R 26248908 intron CR42745 + chr3R_17_26245001 chr3R_26245001 EF39_1-HE 2943 chr3R 26326353 26326407 chr3R 26326483 26326537 9 129 2.5 4.5 3.5 2.0 184 chr3R 26326353 intron CG33970 + chr3R 26326445 intron CG33970 + chr3R 26326537 intron CG33970 + chr3R_9_26325001 chr3R_26325001 EF39_1-HE 2944 chr3R 26338653 26338705 chr3R 26338757 26338809 16 104 3.5 7.0 5.2 2.6 156 chr3R 26338653 intron CG33970 + chr3R 26338731 intron CG33970 + chr3R 26338809 intron CG33970 + chr3R_16_26335001 chr3R_26335001 EF39_1-HE 2945 chr3R 26370316 26370360 chr3R 26370426 26370470 17 109 0.5 3.5 2.0 5.7 154 chr3R 26370316 intergenic not near genes chr3R 26370393 intergenic not near genes chr3R 26370470 intergenic not near genes chr3R_17_26370001 chr3R_26370001 EF39_1-HE 2946 chr3R 26376312 26376342 chr3R 26385498 26385528 roo 11 9186 6.5 0.0 3.2 2.6 9216 chr3R 26376312 intergenic not near genes chr3R 26380920 intergenic not near genes chr3R 26385528 intergenic not near genes chr3R_11_26380001 chr3R_26380001 EF39_1-HE 2947 chr3R 26472347 26472380 chr3R 26472513 26472547 9 167 6.0 7.5 6.8 1.2 200 chr3R 26472347 3` UTR plum - chr3R 26472447 3` UTR plum - chr3R 26472547 3` UTR plum - chr3R_9_26470001 chr3R_26470001 EF39_1-HE 2948 chr3R 26502673 26502708 chr3R 26502785 26502820 16 112 6.5 5.0 5.8 2.4 147 chr3R 26502673 intron plum - chr3R 26502746 intron plum - chr3R 26502820 intron plum - chr3R_16_26500001 chr3R_26500001 EF39_1-HE 2949 chr3R 26510496 26510531 chr3R 26519577 26519612 roo 6 9081 3.0 2.0 2.5 1.7 9116 chr3R 26510496 intron plum - chr3R 26515054 intron plum - chr3R 26519612 intron,5` UTR plum -,CR45226 + chr3R_6_26515001 chr3R_26515001 EF39_1-HE 2950 chr3R 26523371 26523384 chr3R 26523481 26523494 4 110 3.0 1.5 2.2 1.2 123 chr3R 26523371 intron plum - chr3R 26523432 intron plum - chr3R 26523494 intron plum - chr3R_4_26520001 chr3R_26520001 EF39_1-HE 2951 chr3R 26529319 26529375 chr3R 26529428 26529484 13 109 4.5 0.0 2.2 4.1 165 chr3R 26529319 intron plum - chr3R 26529402 intron plum - chr3R 26529484 intron plum - chr3R_13_26525001 chr3R_26525001 EF39_1-HE 2952 chr3R 26540973 26541029 chr3R 26541079 26541134 8 106 1.5 1.0 1.2 3.6 161 chr3R 26540973 intron scrib + chr3R 26541054 intron scrib + chr3R 26541134 intron scrib + chr3R_8_26540001 chr3R_26540001 EF39_1-HE 2953 chr3R 26558306 26558356 chr3R 26565644 26565694 Stalker4 8 7338 5.0 5.0 5.0 1.3 7388 chr3R 26558306 intron scrib + chr3R 26562000 intron scrib + chr3R 26565694 intron scrib + chr3R_8_26560001 chr3R_26560001 EF39_1-HE 2954 chr3R 26607714 26607740 chr3R 26607814 26607842 8 101 2.5 2.0 2.2 2.5 128 chr3R 26607714 5` UTR CR44951 + chr3R 26607778 5` UTR CR44951 + chr3R 26607842 5` UTR CR44951 + chr3R_8_26605001 chr3R_26605001 EF39_1-HE 2955 chr3R 26611322 26611358 chr3R 26611424 26611460 6 102 2.5 1.0 1.8 2.1 138 chr3R 26611322 intergenic not near genes chr3R 26611391 intergenic not near genes chr3R 26611460 intergenic not near genes chr3R_6_26610001 chr3R_26610001 EF39_1-HE 2956 chr3R 26641621 26641662 chr3R 26641734 26641775 10 113 3.0 1.0 2.0 3.3 154 chr3R 26641621 intergenic not near genes chr3R 26641698 intergenic not near genes chr3R 26641775 intergenic not near genes chr3R_10_26640001 chr3R_26640001 EF39_1-HE 2957 chr3R 26642718 26642752 chr3R 26643132 26643171 jockey 10 418 4.5 2.0 3.2 2.4 453 chr3R 26642718 intergenic not near genes chr3R 26642944 intergenic not near genes chr3R 26643171 intergenic not near genes chr3R_10_26640001 chr3R_26640001 EF39_1-HE 2958 chr3R 26655068 26655122 chr3R 26655184 26655238 9 116 1.5 4.0 2.8 2.4 170 chr3R 26655068 intron beat-VII - chr3R 26655153 intron beat-VII - chr3R 26655238 intron beat-VII - chr3R_9_26655001 chr3R_26655001 EF39_1-HE 2959 chr3R 26710803 26710857 chr3R 26710913 26710967 12 110 1.5 1.5 1.5 4.8 164 chr3R 26710803 intron amon - chr3R 26710885 intron amon - chr3R 26710967 intron amon - chr3R_12_26710001 chr3R_26710001 EF39_1-HE 2960 chr3R 26712393 26712438 chr3R 26712960 26713005 11 567 3.5 4.0 3.8 2.3 612 chr3R 26712393 intron amon - chr3R 26712699 intron amon - chr3R 26713005 intron amon - chr3R_11_26710001 chr3R_26710001 EF39_1-HE 2961 chr3R 26740892 26740936 chr3R 26741089 26741129 13 196 3.5 6.0 4.8 2.2 237 chr3R 26740892 intergenic not near genes chr3R 26741010 intergenic not near genes chr3R 26741129 intergenic not near genes chr3R_13_26740001 chr3R_26740001 EF39_1-HE 2962 chr3R 26770215 26770270 chr3R 26770318 26770373 20 103 7.5 5.0 6.2 2.8 158 chr3R 26770215 intergenic CR45563 + chr3R 26770294 intergenic CR45563 + chr3R 26770373 intergenic not near genes chr3R_20_26770001 chr3R_26770001 EF39_1-HE 2963 chr3R 26786463 26786520 chr3R 26786581 26786638 9 118 2.5 3.0 2.8 2.4 175 chr3R 26786463 intergenic not near genes chr3R 26786550 intergenic not near genes chr3R 26786638 intergenic not near genes chr3R_9_26785001 chr3R_26785001 EF39_1-HE 2964 chr3R 26810527 26810557 chr3R 26811038 26811068 roo 9 511 8.0 7.0 7.5 1.1 541 chr3R 26810527 intron Tl + chr3R 26810798 intron Tl + chr3R 26811068 intron Tl + chr3R_9_26810001 chr3R_26810001 EF39_1-HE 2965 chr3R 26810558 26810577 chr3R 26811069 26811088 roo 4 511 5.0 12.5 8.8 0.4 530 chr3R 26810558 intron Tl + chr3R 26810823 intron Tl + chr3R 26811088 intron Tl + chr3R_4_26810001 chr3R_26810001 EF39_1-HE 2966 chr3R 26816717 26816748 chr3R 26816836 26816867 13 119 8.5 4.0 6.2 1.8 150 chr3R 26816717 intron Tl + chr3R 26816792 intron Tl + chr3R 26816867 intron Tl + chr3R_13_26815001 chr3R_26815001 EF39_1-HE 2967 chr3R 26825041 26825082 chr3R 26825143 26825184 5 102 7.5 5.0 6.2 0.7 143 chr3R 26825041 intron Tl + chr3R 26825112 intron Tl + chr3R 26825184 intron Tl + chr3R_5_26825001 chr3R_26825001 EF39_1-HE 2968 chr3R 26831745 26831788 chr3R 26831935 26831978 8 190 4.0 2.5 3.2 1.9 233 chr3R 26831745 intron Tl + chr3R 26831862 intron Tl + chr3R 26831978 intron Tl + chr3R_8_26830001 chr3R_26830001 EF39_1-HE 2969 chr3R 26915742 26915787 chr3R 26915854 26915899 8 112 2.0 1.5 1.8 2.9 157 chr3R 26915742 intergenic sda + chr3R 26915820 5` UTR sda + chr3R 26915899 5` UTR sda + chr3R_8_26915001 chr3R_26915001 EF39_1-HE 2970 chr3R 27007384 27007432 chr3R 27016545 27016593 roo 13 9160 5.0 5.5 5.2 2.1 9209 chr3R 27007384 intron RYa-R + chr3R 27011988 intron RYa-R + chr3R 27016593 intron RYa-R + chr3R_13_27010001 chr3R_27010001 EF39_1-HE 2971 chr3R 27027655 27027700 chr3R 27027765 27027808 13 109 5.5 6.0 5.8 1.9 153 chr3R 27027655 intron RYa-R + chr3R 27027732 intron RYa-R + chr3R 27027808 intron RYa-R + chr3R_13_27025001 chr3R_27025001 EF39_1-HE 2972 chr3R 27028703 27028744 chr3R 27028808 27028849 13 105 3.0 1.5 2.2 4.1 146 chr3R 27028703 intron RYa-R + chr3R 27028776 intron RYa-R + chr3R 27028849 intron RYa-R + chr3R_13_27025001 chr3R_27025001 EF39_1-HE 2973 chr3R 27037817 27037873 chr3R 27037952 27038008 19 135 5.5 3.5 4.5 3.5 191 chr3R 27037817 intron RYa-R + chr3R 27037912 intron RYa-R + chr3R 27038008 intron RYa-R + chr3R_19_27035001 chr3R_27035001 EF39_1-HE 2974 chr3R 27054539 27054589 chr3R 27054655 27054705 14 116 2.0 1.0 1.5 5.6 166 chr3R 27054539 intron RYa-R + chr3R 27054622 intron RYa-R + chr3R 27054705 intron RYa-R + chr3R_14_27050001 chr3R_27050001 EF39_1-HE 2975 chr3R 27076657 27076703 chr3R 27076793 27076843 13 137 0.5 9.5 5.0 2.2 186 chr3R 27076657 intron CG14257 + chr3R 27076750 intron CG14257 + chr3R 27076843 intron CG14257 + chr3R_13_27075001 chr3R_27075001 EF39_1-HE 2976 chr3R 27176599 27176638 chr3R 27176706 27176745 5 107 2.0 3.0 2.5 1.4 146 chr3R 27176599 intron Ser - chr3R 27176672 intron Ser - chr3R 27176745 intron Ser - chr3R_5_27175001 chr3R_27175001 EF39_1-HE 2977 chr3R 27218704 27218738 chr3R 27218816 27218849 7 112 2.0 3.0 2.5 2.0 145 chr3R 27218704 intergenic not near genes chr3R 27218776 intergenic not near genes chr3R 27218849 intergenic not near genes chr3R_7_27215001 chr3R_27215001 EF39_1-HE 2978 chr3R 27300836 27300856 chr3R 27300954 27300974 7 118 3.5 3.0 3.2 1.7 138 chr3R 27300836 intron CG3339 - chr3R 27300905 intron CG3339 - chr3R 27300974 intron CG3339 - chr3R_7_27300001 chr3R_27300001 EF39_1-HE 2979 chr3R 27329447 27329482 chr3R 27329550 27329585 7 103 1.0 1.5 1.2 3.2 138 chr3R 27329447 intergenic CG3330 - chr3R 27329516 intergenic CG3330 - chr3R 27329585 intergenic CG3330 - chr3R_7_27325001 chr3R_27325001 EF39_1-HE 2980 chr3R 27342771 27342821 chr3R 27351378 27351428 Tirant 5 8604 0.5 2.5 1.5 2.0 8657 chr3R 27342771 intron CG42534 + chr3R 27347100 intron CG42534 + chr3R 27351428 intron CG42534 + chr3R_5_27345001 chr3R_27345001 EF39_1-HE 2981 chr3R 27377461 27377502 chr3R 27377559 27377616 17 113 1.5 3.0 2.2 5.3 155 chr3R 27377461 3` UTR side - chr3R 27377538 3` UTR side - chr3R 27377616 3` UTR side - chr3R_17_27375001 chr3R_27375001 EF39_1-HE 2982 chr3R 27403161 27403184 chr3R 27403264 27403287 11 103 6.0 5.0 5.5 1.7 126 chr3R 27403161 intron side - chr3R 27403224 intron side - chr3R 27403287 intron side - chr3R_11_27400001 chr3R_27400001 EF39_1-HE 2983 chr3R 27404927 27404957 chr3R 27405033 27405063 7 104 3.0 8.0 5.5 1.1 136 chr3R 27404927 intron side - chr3R 27404995 intron side - chr3R 27405063 intron side - chr3R_7_27400001 chr3R_27400001 EF39_1-HE 2984 chr3R 27492353 27492386 chr3R 27492465 27492499 15 113 4.5 3.0 3.8 3.1 146 chr3R 27492353 intergenic not near genes chr3R 27492426 intergenic not near genes chr3R 27492499 intergenic not near genes chr3R_15_27490001 chr3R_27490001 EF39_1-HE 2985 chr3R 27506277 27506284 chr3R 27506385 27506392 4 108 2.5 4.0 3.2 1.0 115 chr3R 27506277 intergenic not near genes chr3R 27506334 intergenic not near genes chr3R 27506392 intergenic not near genes chr3R_4_27505001 chr3R_27505001 EF39_1-HE 2986 chr3R 27521138 27521188 chr3R 27530373 27530423 roo 5 9233 1.0 2.5 1.8 1.8 9285 chr3R 27521138 intron CG12885 + chr3R 27525780 intron CG12885 + chr3R 27530423 intron CG12885 + chr3R_5_27525001 chr3R_27525001 EF39_1-HE 2987 chr3R 27558088 27558100 chr3R 27558223 27558235 4 135 7.5 3.0 5.2 0.6 147 chr3R 27558088 intron Klp98A - chr3R 27558162 intron Klp98A - chr3R 27558235 intron Klp98A - chr3R_4_27555001 chr3R_27555001 EF39_1-HE 2988 chr3R 27648562 27648586 chr3R 27648671 27648694 12 108 11.5 0.5 6.0 1.7 132 chr3R 27648562 intron tau - chr3R 27648628 intron tau - chr3R 27648694 intron tau - chr3R_12_27645001 chr3R_27645001 EF39_1-HE 2989 chr3R 27648821 27648870 chr3R 27648924 27648973 24 102 5.5 5.0 5.2 3.9 152 chr3R 27648821 intron tau - chr3R 27648897 intron tau - chr3R 27648973 intron tau - chr3R_24_27645001 chr3R_27645001 EF39_1-HE 2990 chr3R 27683907 27683959 chr3R 27684019 27684071 6 112 3.0 1.0 2.0 2.0 164 chr3R 27683907 intergenic not near genes chr3R 27683989 intergenic not near genes chr3R 27684071 intergenic not near genes chr3R_6_27680001 chr3R_27680001 EF39_1-HE 2991 chr3R 27706751 27706802 chr3R 27706854 27706905 7 103 3.0 3.0 3.0 1.8 154 chr3R 27706751 5` UTR CG12428 - chr3R 27706828 intergenic CG12428 -,CG12877 + chr3R 27706905 intergenic CG12428 -,CG12877 + chr3R_7_27705001 chr3R_27705001 EF39_1-HE 2992 chr3R 27717765 27717787 chr3R 27717974 27718002 12 213 1.5 4.0 2.8 3.2 237 chr3R 27717765 intergenic not near genes chr3R 27717884 intergenic not near genes chr3R 27718002 intergenic not near genes chr3R_12_27715001 chr3R_27715001 EF39_1-HE 2993 chr3R 27718551 27718597 chr3R 27718656 27718702 7 105 6.0 5.5 5.8 1.0 151 chr3R 27718551 intergenic not near genes chr3R 27718626 intergenic not near genes chr3R 27718702 intergenic not near genes chr3R_7_27715001 chr3R_27715001 EF39_1-HE 2994 chr3R 27743530 27743571 chr3R 27743644 27743684 4 114 2.0 4.0 3.0 1.0 154 chr3R 27743530 intron Ets98B + chr3R 27743607 intron Ets98B + chr3R 27743684 intron Ets98B + chr3R_4_27740001 chr3R_27740001 EF39_1-HE 2995 chr3R 27779245 27779290 chr3R 27779348 27779393 13 103 9.0 6.5 7.8 1.5 148 chr3R 27779245 exon CG34353 - chr3R 27779319 intron CG34353 - chr3R 27779393 intron CG34353 - chr3R_13_27775001 chr3R_27775001 EF39_1-HE 2996 chr3R 27799919 27799962 chr3R 27800026 27800070 16 108 3.0 5.0 4.0 3.2 151 chr3R 27799919 intron CG34353 - chr3R 27799994 intron CG34353 - chr3R 27800070 intron CG34353 - chr3R_16_27795001 chr3R_27795001 EF39_1-HE 2997 chr3R 27840231 27840269 chr3R 27840379 27840417 8 148 0.0 5.0 2.5 2.3 186 chr3R 27840231 intron CG34353 - chr3R 27840324 intron CG34353 - chr3R 27840417 intron CG34353 - chr3R_8_27840001 chr3R_27840001 EF39_1-HE 2998 chr3R 27847474 27847528 chr3R 27847576 27847630 12 101 1.0 4.5 2.8 3.2 156 chr3R 27847474 intron CG34353 - chr3R 27847552 intron CG34353 - chr3R 27847630 intron CG34353 - chr3R_12_27845001 chr3R_27845001 EF39_1-HE 2999 chr3R 27854183 27854227 chr3R 27854286 27854332 11 103 3.5 4.0 3.8 2.3 149 chr3R 27854183 intron CG34353 - chr3R 27854258 intron CG34353 - chr3R 27854332 intron CG34353 - chr3R_11_27850001 chr3R_27850001 EF39_1-HE 3000 chr3R 27856741 27856788 chr3R 27858250 27858292 hopper2 17 1508 9.5 9.5 9.5 1.6 1551 chr3R 27856741 intron CG34353 - chr3R 27857516 intron CG34353 - chr3R 27858292 intron CG34353 - chr3R_17_27855001 chr3R_27855001 EF39_1-HE 3001 chr3R 27862932 27862985 chr3R 27868263 27868316 Transpac 18 5331 0.5 3.5 2.0 6.0 5384 chr3R 27862932 intron CG34353 - chr3R 27865624 intron CG34353 - chr3R 27868316 intron CG34353 - chr3R_18_27865001 chr3R_27865001 EF39_1-HE 3002 chr3R 27875693 27875722 chr3R 27882774 27882803 297 7 7081 8.5 7.5 8.0 0.8 7110 chr3R 27875693 intron CG34353 - chr3R 27879248 intron CG34353 - chr3R 27882803 intron CG34353 - chr3R_7_27875001 chr3R_27875001 EF39_1-HE 3003 chr3R 27905094 27905114 chr3R 27905201 27905227 7 112 2.0 5.0 3.5 1.6 133 chr3R 27905094 5` UTR CG34353 - chr3R 27905160 5` UTR CG34353 - chr3R 27905227 5` UTR CG34353 - chr3R_7_27905001 chr3R_27905001 EF39_1-HE 3004 chr3R 27911225 27911258 chr3R 27911329 27911362 10 104 2.5 4.0 3.2 2.4 137 chr3R 27911225 intergenic not near genes chr3R 27911294 intergenic not near genes chr3R 27911362 intergenic not near genes chr3R_10_27910001 chr3R_27910001 EF39_1-HE 3005 chr3R 27926967 27927015 chr3R 27927392 27927441 11 423 2.0 3.0 2.5 3.1 474 chr3R 27926967 intron mino + chr3R 27927204 intron mino + chr3R 27927441 intron,3` UTR mino +,CG31053 - chr3R_11_27925001 chr3R_27925001 EF39_1-HE 3006 chr3R 27968248 27968302 chr3R 27968355 27968409 18 106 1.0 4.5 2.8 4.7 161 chr3R 27968248 intron betaTub97EF - chr3R 27968328 intron betaTub97EF - chr3R 27968409 intron betaTub97EF - chr3R_18_27965001 chr3R_27965001 EF39_1-HE 3007 chr3R 27999949 27999974 chr3R 28000052 28000077 6 103 7.0 6.0 6.5 0.8 128 chr3R 27999949 intergenic not near genes chr3R 28000013 intergenic not near genes chr3R 28000077 intergenic not near genes chr3R_6_28000001 chr3R_28000001 EF39_1-HE 3008 chr3R 28012084 28012128 chr3R 28012277 28012321 11 193 3.0 2.0 2.5 3.1 237 chr3R 28012084 intergenic not near genes chr3R 28012202 intergenic not near genes chr3R 28012321 intergenic not near genes chr3R_11_28010001 chr3R_28010001 EF39_1-HE 3009 chr3R 28019577 28019589 chr3R 28019695 28019707 5 118 0.0 7.0 3.5 1.1 130 chr3R 28019577 intergenic not near genes chr3R 28019642 intergenic not near genes chr3R 28019707 intergenic not near genes chr3R_5_28015001 chr3R_28015001 EF39_1-HE 3010 chr3R 28035464 28035515 chr3R 28035565 28035618 7 100 2.0 3.0 2.5 2.0 154 chr3R 28035464 intron CG34362 + chr3R 28035541 intron CG34362 + chr3R 28035618 intron CG34362 + chr3R_7_28035001 chr3R_28035001 EF39_1-HE 3011 chr3R 28068483 28068523 chr3R 28073951 28073991 I-element 8 5468 0.0 6.0 3.0 2.0 5508 chr3R 28068483 intron CG34362 + chr3R 28071237 intron CG34362 + chr3R 28073991 intron CG34362 + chr3R_8_28070001 chr3R_28070001 EF39_1-HE 3012 chr3R 28076492 28076553 chr3R 28076754 28076809 10 257 0.0 3.0 1.5 4.0 317 chr3R 28076492 intron CG34362 + chr3R 28076650 intron CG34362 + chr3R 28076809 intron CG34362 + chr3R_10_28075001 chr3R_28075001 EF39_1-HE 3013 chr3R 28101794 28101844 chr3R 28101920 28101970 16 126 3.0 4.5 3.8 3.3 176 chr3R 28101794 intergenic not near genes chr3R 28101882 intergenic not near genes chr3R 28101970 intergenic not near genes chr3R_16_28100001 chr3R_28100001 EF39_1-HE 3014 chr3R 28131519 28131579 chr3R 28131802 28131861 13 282 30.0 26.5 28.2 0.4 342 chr3R 28131519 intergenic not near genes chr3R 28131690 intergenic not near genes chr3R 28131861 intergenic not near genes chr3R_13_28130001 chr3R_28130001 EF39_1-HE 3015 chr3R 28133690 28133743 chr3R 28133881 28133934 7 189 7.5 1.0 4.2 1.3 244 chr3R 28133690 intergenic not near genes chr3R 28133812 intergenic not near genes chr3R 28133934 intergenic not near genes chr3R_7_28130001 chr3R_28130001 EF39_1-HE 3016 chr3R 28173657 28173702 chr3R 28181113 28181158 mdg1 9 7456 2.0 3.0 2.5 2.6 7501 chr3R 28173657 intron CG34354 + chr3R 28177408 intron CG34354 + chr3R 28181158 intron CG34354 + chr3R_9_28175001 chr3R_28175001 EF39_1-HE 3017 chr3R 28253316 28253321 chr3R 28255852 28255857 jockey 5 2536 14.0 5.0 9.5 0.5 2541 chr3R 28253316 intergenic not near genes chr3R 28254586 intergenic not near genes chr3R 28255857 intergenic not near genes chr3R_5_28250001 chr3R_28250001 EF39_1-HE 3018 chr3R 28253324 28253337 chr3R 28255860 28255873 jockey 5 2536 11.0 5.0 8.0 0.6 2549 chr3R 28253324 intergenic not near genes chr3R 28254598 intergenic not near genes chr3R 28255873 intergenic not near genes chr3R_5_28250001 chr3R_28250001 EF39_1-HE 3019 chr3R 28253340 28253367 chr3R 28255850 28255903 jockey 12 2533 5.5 5.0 5.2 1.9 2563 chr3R 28253340 intergenic not near genes chr3R 28254622 intergenic not near genes chr3R 28255903 intergenic not near genes chr3R_12_28250001 chr3R_28250001 EF39_1-HE 3020 chr3R 28282362 28282413 chr3R 28282464 28282515 14 102 6.5 7.5 7.0 1.8 153 chr3R 28282362 intergenic CG34436 + chr3R 28282438 intergenic CG34436 + chr3R 28282515 intergenic CG34436 + chr3R_14_28280001 chr3R_28280001 EF39_1-HE 3021 chr3R 28300183 28300238 chr3R 28300368 28300417 16 185 3.0 1.5 2.2 5.0 234 chr3R 28300183 intergenic not near genes chr3R 28300300 intergenic not near genes chr3R 28300417 intergenic not near genes chr3R_16_28300001 chr3R_28300001 EF39_1-HE 3022 chr3R 28302096 28302117 chr3R 28302564 28302585 jockey 6 468 3.5 6.0 4.8 1.0 489 chr3R 28302096 intergenic not near genes chr3R 28302340 intergenic not near genes chr3R 28302585 intergenic not near genes chr3R_6_28300001 chr3R_28300001 EF39_1-HE 3023 chr3R 28344047 28344092 chr3R 28344150 28344181 7 100 5.0 2.5 3.8 1.5 134 chr3R 28344047 exon Moca-cyp + chr3R 28344114 exon Moca-cyp + chr3R 28344181 exon Moca-cyp + chr3R_7_28340001 chr3R_28340001 EF39_1-HE 3024 chr3R 28345628 28345673 chr3R 28345730 28345775 11 102 2.5 2.0 2.2 3.4 147 chr3R 28345628 intergenic Moca-cyp + chr3R 28345702 intergenic not near genes chr3R 28345775 intergenic not near genes chr3R_11_28345001 chr3R_28345001 EF39_1-HE 3025 chr3R 28368975 28369015 chr3R 28369085 28369125 6 110 2.0 5.5 3.8 1.2 150 chr3R 28368975 intergenic not near genes chr3R 28369050 intergenic not near genes chr3R 28369125 intergenic not near genes chr3R_6_28365001 chr3R_28365001 EF39_1-HE 3026 chr3R 28390089 28390134 chr3R 28390193 28390238 7 102 0.5 1.5 1.0 3.5 149 chr3R 28390089 intergenic not near genes chr3R 28390164 intergenic not near genes chr3R 28390238 intergenic not near genes chr3R_7_28390001 chr3R_28390001 EF39_1-HE 3027 chr3R 28411092 28411133 chr3R 28411193 28411235 7 102 5.0 2.5 3.8 1.5 143 chr3R 28411092 intergenic not near genes chr3R 28411164 intergenic not near genes chr3R 28411235 intergenic not near genes chr3R_7_28410001 chr3R_28410001 EF39_1-HE 3028 chr3R 28415250 28415287 chr3R 28415361 28415385 15 108 1.0 6.5 3.8 3.1 135 chr3R 28415250 intergenic not near genes chr3R 28415318 intergenic not near genes chr3R 28415385 intergenic not near genes chr3R_15_28415001 chr3R_28415001 EF39_1-HE 3029 chr3R 28424145 28424199 chr3R 28424260 28424314 10 115 2.5 2.0 2.2 3.1 169 chr3R 28424145 intron beat-VI + chr3R 28424230 intron beat-VI + chr3R 28424314 intron beat-VI + chr3R_10_28420001 chr3R_28420001 EF39_1-HE 3030 chr3R 28441968 28442005 chr3R 28442080 28442126 14 118 3.0 7.5 5.2 2.3 158 chr3R 28441968 intron beat-VI + chr3R 28442047 intron beat-VI + chr3R 28442126 intron beat-VI + chr3R_14_28440001 chr3R_28440001 EF39_1-HE 3031 chr3R 28484353 28484401 chr3R 28486244 28486292 20 1892 20.0 22.5 21.2 0.9 1939 chr3R 28484353 intergenic CG1894 + chr3R 28485322 exon CG1894 + chr3R 28486292 intergenic CG1894 + chr3R_20_28485001 chr3R_28485001 EF39_1-HE 3032 chr3R 28506580 28506633 chr3R 28506686 28506739 14 106 3.0 1.5 2.2 4.4 159 chr3R 28506580 exon Dhc98D + chr3R 28506660 intron Dhc98D + chr3R 28506739 intron Dhc98D + chr3R_14_28505001 chr3R_28505001 EF39_1-HE 3033 chr3R 28518183 28518212 chr3R 28518290 28518319 6 107 6.0 3.5 4.8 1.0 136 chr3R 28518183 exon Dhc98D + chr3R 28518251 intron Dhc98D + chr3R 28518319 intron Dhc98D + chr3R_6_28515001 chr3R_28515001 EF39_1-HE 3034 chr3R 28633172 28633218 chr3R 28633278 28633324 16 106 2.5 7.5 5.0 2.7 152 chr3R 28633172 intron CG10011 - chr3R 28633248 intron CG10011 - chr3R 28633324 intron CG10011 - chr3R_16_28630001 chr3R_28630001 EF39_1-HE 3035 chr3R 28655122 28655173 chr3R 28655307 28655358 14 184 2.5 2.5 2.5 4.0 236 chr3R 28655122 intergenic not near genes chr3R 28655240 intergenic not near genes chr3R 28655358 intergenic not near genes chr3R_14_28655001 chr3R_28655001 EF39_1-HE 3036 chr3R 28736426 28736480 chr3R 28736534 28736588 16 108 5.5 3.5 4.5 2.9 162 chr3R 28736426 intergenic not near genes chr3R 28736507 intergenic not near genes chr3R 28736588 intergenic not near genes chr3R_16_28735001 chr3R_28735001 EF39_1-HE 3037 chr3R 28758260 28758279 chr3R 28763903 28763922 roo 6 5643 11.5 0.5 6.0 0.9 5662 chr3R 28758260 intergenic aqrs - chr3R 28761091 intergenic not near genes chr3R 28763922 intergenic not near genes chr3R_6_28760001 chr3R_28760001 EF39_1-HE 3038 chr3R 28758296 28758305 chr3R 28771329 28771338 Stalker4 4 13033 5.5 0.0 2.8 1.1 13042 chr3R 28758296 intergenic aqrs - chr3R 28764817 intergenic not near genes chr3R 28771338 intergenic not near genes chr3R_4_28760001 chr3R_28760001 EF39_1-HE 3039 chr3R 28792857 28792899 chr3R 28797977 28798020 jockey 9 5120 3.5 2.0 2.8 2.4 5163 chr3R 28792857 intergenic not near genes chr3R 28795438 intergenic not near genes chr3R 28798020 intergenic not near genes chr3R_9_28795001 chr3R_28795001 EF39_1-HE 3040 chr3R 28830871 28830920 chr3R 28830975 28831024 12 103 3.0 5.0 4.0 2.4 153 chr3R 28830871 intron WASp - chr3R 28830948 intron WASp - chr3R 28831024 intron WASp - chr3R_12_28830001 chr3R_28830001 EF39_1-HE 3041 chr3R 28898680 28898710 chr3R 28898799 28898829 7 119 6.0 5.0 5.5 1.1 149 chr3R 28898680 intron Doa + chr3R 28898754 intron Doa + chr3R 28898829 intron Doa + chr3R_7_28895001 chr3R_28895001 EF39_1-HE 3042 chr3R 28985020 28985027 chr3R 28985128 28985135 5 108 1.5 2.0 1.8 1.8 115 chr3R 28985020 intergenic not near genes chr3R 28985078 intergenic not near genes chr3R 28985135 intergenic not near genes chr3R_5_28985001 chr3R_28985001 EF39_1-HE 3043 chr3R 28989877 28989933 chr3R 28990078 28990134 17 200 6.0 5.0 5.5 2.6 257 chr3R 28989877 intergenic not near genes chr3R 28990006 intergenic not near genes chr3R 28990134 intergenic not near genes chr3R_17_28990001 chr3R_28990001 EF39_1-HE 3044 chr3R 28992739 28992793 chr3R 28992843 28992897 16 103 8.0 6.0 7.0 2.0 158 chr3R 28992739 intergenic wat - chr3R 28992818 intergenic wat - chr3R 28992897 intergenic wat - chr3R_16_28990001 chr3R_28990001 EF39_1-HE 3045 chr3R 29017836 29017848 chr3R 29017939 29017951 5 103 10.5 8.0 9.2 0.5 115 chr3R 29017836 intron wat - chr3R 29017894 intron wat - chr3R 29017951 intron wat - chr3R_5_29015001 chr3R_29015001 EF39_1-HE 3046 chr3R 29032727 29032775 chr3R 29032830 29032878 13 101 3.0 4.0 3.5 2.9 151 chr3R 29032727 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032802 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032878 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R_13_29030001 chr3R_29030001 EF39_1-HE 3047 chr3R 29034072 29034097 chr3R 29034493 29034518 6 421 1.5 4.0 2.8 1.6 446 chr3R 29034072 5` UTR CR45044 + chr3R 29034295 intergenic CR45044 +,Cpsf100 +,beta4GalNAcTB - chr3R 29034518 intergenic Cpsf100 +,CR45044 + chr3R_6_29030001 chr3R_29030001 EF39_1-HE 3048 chr3R 29050968 29051023 chr3R 29051379 29051440 8 416 2.0 1.5 1.8 2.9 472 chr3R 29050968 intergenic CG11841 +,CG11837 + chr3R 29051204 intron CG11841 + chr3R 29051440 exon CG11841 + chr3R_8_29050001 chr3R_29050001 EF39_1-HE 3049 chr3R 29066248 29066295 chr3R 29066395 29066440 17 147 6.0 4.0 5.0 2.8 192 chr3R 29066248 intron CG11873 + chr3R 29066344 intron CG11873 + chr3R 29066440 intron CG11873 + chr3R_17_29065001 chr3R_29065001 EF39_1-HE 3050 chr3R 29079360 29079410 chr3R 29080754 29080808 NOF 18 1398 2.5 4.0 3.2 4.3 1448 chr3R 29079360 intron CG11873 + chr3R 29080084 intron CG11873 + chr3R 29080808 intron CG11873 + chr3R_18_29080001 chr3R_29080001 EF39_1-HE 3051 chr3R 29091406 29091437 chr3R 29091520 29091547 11 113 5.0 5.5 5.2 1.8 141 chr3R 29091406 intron CG11873 + chr3R 29091476 intron CG11873 + chr3R 29091547 intron CG11873 + chr3R_11_29090001 chr3R_29090001 EF39_1-HE 3052 chr3R 29113833 29113860 chr3R 29113950 29113977 8 117 0.0 9.0 4.5 1.5 144 chr3R 29113833 intron CG11876 + chr3R 29113905 intron CG11876 + chr3R 29113977 intron CG11876 + chr3R_8_29110001 chr3R_29110001 EF39_1-HE 3053 chr3R 29176107 29176136 chr3R 29176222 29176250 9 115 5.0 1.0 3.0 2.2 143 chr3R 29176107 intron CG14509 - chr3R 29176178 intron CG14509 - chr3R 29176250 intron CG14509 - chr3R_9_29175001 chr3R_29175001 EF39_1-HE 3054 chr3R 29237242 29237258 chr3R 29239289 29239305 4 2047 12.0 2.5 7.2 0.5 2063 chr3R 29237242 exon CG11951 - chr3R 29238274 intron CG11951 - chr3R 29239305 exon CG31427 - chr3R_4_29235001 chr3R_29235001 EF39_1-HE 3055 chr3R 29239212 29239238 chr3R 29245529 29245555 4 6315 1.0 19.5 10.2 0.4 6343 chr3R 29239212 exon CG31427 - chr3R 29242384 exon CG31445 - chr3R 29245555 exon SP1029 - chr3R_4_29240001 chr3R_29240001 EF39_1-HE 3056 chr3R 29256243 29256299 chr3R 29256348 29256405 19 105 3.5 6.0 4.8 3.3 162 chr3R 29256243 intergenic CG45544 +,stg - chr3R 29256324 intergenic CG45544 + chr3R 29256405 intergenic CG45544 + chr3R_19_29255001 chr3R_29255001 EF39_1-HE 3057 chr3R 29264194 29264213 chr3R 29264322 29264339 7 128 0.0 9.0 4.5 1.3 145 chr3R 29264194 intergenic not near genes chr3R 29264266 intergenic not near genes chr3R 29264339 intergenic not near genes chr3R_7_29260001 chr3R_29260001 EF39_1-HE 3058 chr3R 29287219 29287261 chr3R 29287321 29287363 12 102 0.0 8.0 4.0 2.4 144 chr3R 29287219 intergenic not near genes chr3R 29287291 intergenic not near genes chr3R 29287363 intergenic not near genes chr3R_12_29285001 chr3R_29285001 EF39_1-HE 3059 chr3R 29313348 29313399 chr3R 29313561 29313612 7 213 2.0 0.5 1.2 3.2 264 chr3R 29313348 intergenic not near genes chr3R 29313480 intergenic not near genes chr3R 29313612 intergenic not near genes chr3R_7_29310001 chr3R_29310001 EF39_1-HE 3060 chr3R 29319809 29319828 chr3R 29320154 29320173 jockey 4 345 7.0 5.5 6.2 0.6 364 chr3R 29319809 intergenic Cnx99A - chr3R 29319991 intergenic Cnx99A - chr3R 29320173 intergenic not near genes chr3R_4_29315001 chr3R_29315001 EF39_1-HE 3061 chr3R 29319839 29319852 chr3R 29320145 29320197 jockey 6 338 4.0 5.0 4.5 1.1 358 chr3R 29319839 intergenic Cnx99A - chr3R 29320018 intergenic Cnx99A - chr3R 29320197 intergenic not near genes chr3R_6_29320001 chr3R_29320001 EF39_1-HE 3062 chr3R 29376338 29376364 chr3R 29376452 29376478 6 114 2.0 0.0 1.0 3.0 140 chr3R 29376338 intergenic not near genes chr3R 29376408 intergenic not near genes chr3R 29376478 intergenic not near genes chr3R_6_29375001 chr3R_29375001 EF39_1-HE 3063 chr3R 29384158 29384183 chr3R 29384261 29384286 11 103 9.0 6.5 7.8 1.2 128 chr3R 29384158 intron Ptp99A + chr3R 29384222 intron Ptp99A + chr3R 29384286 intron Ptp99A + chr3R_11_29380001 chr3R_29380001 EF39_1-HE 3064 chr3R 29389346 29389363 chr3R 29389461 29389471 4 113 2.5 6.0 4.2 0.8 125 chr3R 29389346 intron Ptp99A + chr3R 29389408 intron Ptp99A + chr3R 29389471 intron Ptp99A + chr3R_4_29385001 chr3R_29385001 EF39_1-HE 3065 chr3R 29406612 29406637 chr3R 29407924 29407949 jockey 6 1312 3.5 3.5 3.5 1.3 1337 chr3R 29406612 intron Ptp99A + chr3R 29407280 intron Ptp99A + chr3R 29407949 intron Ptp99A + chr3R_6_29405001 chr3R_29405001 EF39_1-HE 3066 chr3R 29447792 29447845 chr3R 29447925 29447978 20 133 1.0 3.0 2.0 6.7 186 chr3R 29447792 intron Ptp99A + chr3R 29447885 intron Ptp99A + chr3R 29447978 intron Ptp99A + chr3R_20_29445001 chr3R_29445001 EF39_1-HE 3067 chr3R 29448248 29448294 chr3R 29449303 29449349 11 1054 5.5 3.0 4.2 2.1 1101 chr3R 29448248 intron Ptp99A + chr3R 29448798 intron Ptp99A + chr3R 29449349 intron Ptp99A + chr3R_11_29445001 chr3R_29445001 EF39_1-HE 3068 chr3R 29449332 29449391 chr3R 29449436 29449495 26 104 4.5 4.5 4.5 4.7 163 chr3R 29449332 intron Ptp99A + chr3R 29449414 intron Ptp99A + chr3R 29449495 intron Ptp99A + chr3R_26_29445001 chr3R_29445001 EF39_1-HE 3069 chr3R 29474447 29474530 chr3R 29474574 29474636 10 116 0.5 2.5 1.5 4.0 189 chr3R 29474447 intron Ptp99A + chr3R 29474542 intron Ptp99A + chr3R 29474636 intron Ptp99A + chr3R_10_29470001 chr3R_29470001 EF39_1-HE 3070 chr3R 29475197 29475235 chr3R 29475315 29475353 4 118 2.5 3.0 2.8 1.1 156 chr3R 29475197 intron Ptp99A + chr3R 29475275 intron Ptp99A + chr3R 29475353 intron Ptp99A + chr3R_4_29475001 chr3R_29475001 EF39_1-HE 3071 chr3R 29477249 29477290 chr3R 29477365 29477406 8 116 1.5 3.5 2.5 2.3 157 chr3R 29477249 intron Ptp99A + chr3R 29477328 intron Ptp99A + chr3R 29477406 intron Ptp99A + chr3R_8_29475001 chr3R_29475001 EF39_1-HE 3072 chr3R 29543124 29543178 chr3R 29543242 29543276 10 116 2.5 0.0 1.2 4.5 152 chr3R 29543124 intergenic not near genes chr3R 29543200 intergenic not near genes chr3R 29543276 intergenic not near genes chr3R_10_29540001 chr3R_29540001 EF39_1-HE 3073 chr3R 29563939 29563981 chr3R 29564052 29564094 22 113 6.5 3.0 4.8 3.8 155 chr3R 29563939 intron Dr + chr3R 29564016 intron Dr + chr3R 29564094 intron Dr + chr3R_22_29560001 chr3R_29560001 EF39_1-HE 3074 chr3R 29592711 29592751 chr3R 29592815 29592855 8 104 4.5 3.0 3.8 1.7 144 chr3R 29592711 intron alph + chr3R 29592783 intron alph + chr3R 29592855 intron alph + chr3R_8_29590001 chr3R_29590001 EF39_1-HE 3075 chr3R 29621028 29621071 chr3R 29621140 29621183 7 112 3.5 2.0 2.8 1.8 155 chr3R 29621028 intergenic CG1907 + chr3R 29621106 intergenic CG1907 + chr3R 29621183 intergenic CG1907 + chr3R_7_29620001 chr3R_29620001 EF39_1-HE 3076 chr3R 29627669 29627706 chr3R 29627871 29627908 7 202 1.5 2.5 2.0 2.3 239 chr3R 29627669 intergenic not near genes chr3R 29627788 intergenic not near genes chr3R 29627908 intergenic not near genes chr3R_7_29625001 chr3R_29625001 EF39_1-HE 3077 chr3R 29719385 29719430 chr3R 29719497 29719542 15 112 2.5 2.5 2.5 4.3 157 chr3R 29719385 intron CG15506 + chr3R 29719464 intron CG15506 + chr3R 29719542 intron CG15506 + chr3R_15_29715001 chr3R_29715001 EF39_1-HE 3078 chr3R 29738242 29738289 chr3R 29739735 29739782 hobo 4 1493 2.5 5.5 4.0 0.8 1540 chr3R 29738242 intergenic CG1969 +,CG7598 + chr3R 29739012 intron CG1969 + chr3R 29739782 5` UTR CG1969 + chr3R_4_29735001 chr3R_29735001 EF39_1-HE 3079 chr3R 29768450 29768606 chr3R 29768568 29768708 18 109 2.0 0.0 1.0 9.0 258 chr3R 29768450 intron kay + chr3R 29768579 intron kay + chr3R 29768708 intron kay + chr3R_18_29765001 chr3R_29765001 EF39_1-HE 3080 chr3R 29773848 29773894 chr3R 29773965 29774011 15 117 7.0 0.5 3.8 3.1 163 chr3R 29773848 intron kay + chr3R 29773930 intron kay + chr3R 29774011 intron kay + chr3R_15_29770001 chr3R_29770001 EF39_1-HE 3081 chr3R 29881995 29882049 chr3R 29891178 29891232 roo 6 9183 3.0 2.5 2.8 1.6 9237 chr3R 29881995 intron CG31038 + chr3R 29886614 intron CG31038 + chr3R 29891232 intron CG31038 + chr3R_6_29885001 chr3R_29885001 EF39_1-HE 3082 chr3R 29966033 29966069 chr3R 29966139 29966159 6 102 4.5 10.0 7.2 0.7 126 chr3R 29966033 intron TkR99D - chr3R 29966096 intron TkR99D - chr3R 29966159 intron TkR99D - chr3R_6_29965001 chr3R_29965001 EF39_1-HE 3083 chr3R 30009008 30009040 chr3R 30009110 30009142 4 102 0.5 5.5 3.0 1.0 134 chr3R 30009008 intron,intron Nlp +,CG7912 - chr3R 30009075 intron,5` UTR Nlp +,CG7912 - chr3R 30009142 intron,5` UTR Nlp +,CG7912 - chr3R_4_30005001 chr3R_30005001 EF39_1-HE 3084 chr3R 30024011 30024069 chr3R 30024129 30024187 8 118 2.5 1.5 2.0 2.7 176 chr3R 30024011 intron Axn + chr3R 30024099 intron Axn + chr3R 30024187 intron Axn + chr3R_8_30020001 chr3R_30020001 EF39_1-HE 3085 chr3R 30032141 30032150 chr3R 30032246 30032255 4 105 12.5 4.0 8.2 0.4 114 chr3R 30032141 intron Axn + chr3R 30032198 intron Axn + chr3R 30032255 intron Axn + chr3R_4_30030001 chr3R_30030001 EF39_1-HE 3086 chr3R 30061838 30061851 chr3R 30061942 30061955 4 104 6.0 1.0 3.5 0.9 117 chr3R 30061838 intron sima + chr3R 30061896 intron sima + chr3R 30061955 intron sima + chr3R_4_30060001 chr3R_30060001 EF39_1-HE 3087 chr3R 30069971 30070016 chr3R 30070100 30070144 10 129 2.0 7.0 4.5 1.8 173 chr3R 30069971 intron sima + chr3R 30070058 intron sima + chr3R 30070144 intron sima + chr3R_10_30070001 chr3R_30070001 EF39_1-HE 3088 chr3R 30084866 30084880 chr3R 30086359 30086368 hobo 6 1491 0.0 5.5 2.8 1.6 1502 chr3R 30084866 intron sima + chr3R 30085617 intron sima + chr3R 30086368 intron sima + chr3R_6_30085001 chr3R_30085001 EF39_1-HE 3089 chr3R 30132803 30132850 chr3R 30132911 30132958 9 108 1.5 3.0 2.2 2.8 155 chr3R 30132803 intergenic Tpi -,CG31029 - chr3R 30132880 intergenic Tpi -,CG31029 - chr3R 30132958 intergenic Tpi - chr3R_9_30130001 chr3R_30130001 EF39_1-HE 3090 chr3R 30181332 30181364 chr3R 30181444 30181483 6 116 6.0 0.0 3.0 1.5 151 chr3R 30181332 3` UTR Bet5 + chr3R 30181408 3` UTR Bet5 + chr3R 30181483 3` UTR Bet5 + chr3R_6_30180001 chr3R_30180001 EF39_1-HE 3091 chr3R 30201272 30201325 chr3R 30201380 30201421 12 107 5.0 2.0 3.5 2.7 149 chr3R 30201272 intron CG9743 - chr3R 30201346 intron CG9743 - chr3R 30201421 intron CG9743 - chr3R_12_30200001 chr3R_30200001 EF39_1-HE 3092 chr3R 30210594 30210670 chr3R 30210733 30210776 9 117 0.0 6.0 3.0 2.2 182 chr3R 30210594 intergenic Anp +,CecA1 + chr3R 30210685 intergenic CecA1 +,Anp + chr3R 30210776 intergenic CecA1 +,Anp + chr3R_9_30210001 chr3R_30210001 EF39_1-HE 3093 chr3R 30238742 30238770 chr3R 30239932 30239961 1360 4 1190 2.0 0.5 1.2 1.8 1219 chr3R 30238742 intergenic not near genes chr3R 30239352 intergenic not near genes chr3R 30239961 intergenic not near genes chr3R_4_30235001 chr3R_30235001 EF39_1-HE 3094 chr3R 30246306 30246603 chr3R 30246411 30246480 9 107 10.0 4.0 7.0 1.1 174 chr3R 30246306 intron CG9733 - chr3R 30246393 intron CG9733 - chr3R 30246480 intron CG9733 - chr3R_9_30245001 chr3R_30245001 EF39_1-HE 3095 chr3R 30267963 30267999 chr3R 30268075 30268110 7 112 3.0 6.0 4.5 1.3 147 chr3R 30267963 intergenic not near genes chr3R 30268036 intergenic not near genes chr3R 30268110 intergenic not near genes chr3R_7_30265001 chr3R_30265001 EF39_1-HE 3096 chr3R 30269615 30269665 chr3R 30269724 30269774 9 109 0.0 1.5 0.8 5.0 159 chr3R 30269615 intergenic not near genes chr3R 30269694 intergenic not near genes chr3R 30269774 intergenic not near genes chr3R_9_30265001 chr3R_30265001 EF39_1-HE 3097 chr3R 30287751 30287772 chr3R 30287860 30287881 7 109 2.5 6.0 4.2 1.3 130 chr3R 30287751 intron hdc + chr3R 30287816 intron hdc + chr3R 30287881 intron hdc + chr3R_7_30285001 chr3R_30285001 EF39_1-HE 3098 chr3R 30317327 30317349 chr3R 30324945 30324967 roo 7 7618 3.5 5.5 4.5 1.3 7640 chr3R 30317327 intron hdc + chr3R 30321147 intron hdc + chr3R 30324967 intron hdc + chr3R_7_30320001 chr3R_30320001 EF39_1-HE 3099 chr3R 30347004 30347031 chr3R 30347118 30347144 7 113 13.5 9.5 11.5 0.6 140 chr3R 30347004 intron hdc + chr3R 30347074 intron hdc + chr3R 30347144 intron hdc + chr3R_7_30345001 chr3R_30345001 EF39_1-HE 3100 chr3R 30396190 30396242 chr3R 30404482 30404534 roo 17 8292 5.0 5.0 5.0 2.8 8344 chr3R 30396190 intergenic not near genes chr3R 30400362 intergenic not near genes chr3R 30404534 5` UTR CR45570 + chr3R_17_30400001 chr3R_30400001 EF39_1-HE 3101 chr3R 30413043 30413091 chr3R 30413145 30413193 7 102 4.5 2.0 3.2 1.7 150 chr3R 30413043 intergenic not near genes chr3R 30413118 intergenic not near genes chr3R 30413193 intergenic not near genes chr3R_7_30410001 chr3R_30410001 EF39_1-HE 3102 chr3R 30480454 30480494 chr3R 30482948 30482988 jockey 7 2494 2.5 3.0 2.8 1.8 2534 chr3R 30480454 intron PH4alphaEFB + chr3R 30481721 intron PH4alphaEFB + chr3R 30482988 intron PH4alphaEFB + chr3R_7_30480001 chr3R_30480001 EF39_1-HE 3103 chr3R 30485029 30485060 chr3R 30485131 30485162 6 102 4.0 1.0 2.5 1.7 133 chr3R 30485029 intron PH4alphaEFB + chr3R 30485096 intron PH4alphaEFB + chr3R 30485162 intron PH4alphaEFB + chr3R_6_30485001 chr3R_30485001 EF39_1-HE 3104 chr3R 30498400 30498432 chr3R 30498626 30498658 8 226 0.0 1.5 0.8 4.4 258 chr3R 30498400 intron PH4alphaNE1 - chr3R 30498529 intron PH4alphaNE1 - chr3R 30498658 intron PH4alphaNE1 - chr3R_8_30495001 chr3R_30495001 EF39_1-HE 3105 chr3R 30522783 30522842 chr3R 30522890 30522949 18 107 4.0 3.0 3.5 4.0 166 chr3R 30522783 intron jdp - chr3R 30522866 intron jdp - chr3R 30522949 intron jdp - chr3R_18_30520001 chr3R_30520001 EF39_1-HE 3106 chr3R 30548987 30549038 chr3R 30549105 30549156 19 118 3.5 4.5 4.0 3.8 169 chr3R 30548987 intron tmod + chr3R 30549072 intron tmod + chr3R 30549156 intron tmod + chr3R_19_30545001 chr3R_30545001 EF39_1-HE 3107 chr3R 30558124 30558153 chr3R 30558231 30558260 7 107 3.5 4.0 3.8 1.5 136 chr3R 30558124 intron,intron tmod +,CG34155 - chr3R 30558192 intron,intron tmod +,CG34155 - chr3R 30558260 intron,intron tmod +,CG34155 - chr3R_7_30555001 chr3R_30555001 EF39_1-HE 3108 chr3R 30627584 30627632 chr3R 30627690 30627738 11 106 4.5 5.0 4.8 1.9 154 chr3R 30627584 3` UTR CG2267 - chr3R 30627661 exon CG2267 - chr3R 30627738 exon CG2267 - chr3R_11_30625001 chr3R_30625001 EF39_1-HE 3109 chr3R 30677867 30677873 chr3R 30678001 30678007 5 133 3.0 6.5 4.8 0.9 140 chr3R 30677867 intergenic not near genes chr3R 30677937 intergenic not near genes chr3R 30678007 intergenic not near genes chr3R_5_30675001 chr3R_30675001 EF39_1-HE 3110 chr3R 30679494 30679550 chr3R 30686989 30687045 blood 9 7495 2.5 3.5 3.0 2.2 7551 chr3R 30679494 intergenic not near genes chr3R 30683270 intergenic not near genes chr3R 30687045 intergenic not near genes chr3R_9_30680001 chr3R_30680001 EF39_1-HE 3111 chr3R 30798044 30798336 chr3R 30798173 30798444 17 107 4.5 11.0 7.8 1.9 400 chr3R 30798044 intron wts - chr3R 30798244 intron wts - chr3R 30798444 intron wts - chr3R_17_30795001 chr3R_30795001 EF39_1-HE 3112 chr3R 30818793 30818842 chr3R 30820383 30820433 1360 13 1591 3.5 3.5 3.5 2.9 1640 chr3R 30818793 intron cindr + chr3R 30819613 intron cindr + chr3R 30820433 intron cindr + chr3R_13_30815001 chr3R_30815001 EF39_1-HE 3113 chr3R 30850214 30850262 chr3R 30850332 30850380 20 118 4.0 2.5 3.2 4.8 166 chr3R 30850214 intergenic not near genes chr3R 30850297 intergenic not near genes chr3R 30850380 intergenic not near genes chr3R_20_30850001 chr3R_30850001 EF39_1-HE 3114 chr3R 30924508 30924550 chr3R 30924634 30924660 13 123 8.0 3.0 5.5 2.0 152 chr3R 30924508 exon Ptx1 + chr3R 30924584 intron Ptx1 + chr3R 30924660 intron Ptx1 + chr3R_13_30920001 chr3R_30920001 EF39_1-HE 3115 chr3R 30982574 30982623 chr3R 30982688 30982741 10 117 4.5 5.0 4.8 1.7 167 chr3R 30982574 intron 5-HT7 - chr3R 30982658 intron 5-HT7 - chr3R 30982741 intron 5-HT7 - chr3R_10_30980001 chr3R_30980001 EF39_1-HE 3116 chr3R 31055503 31055514 chr3R 31055638 31055649 4 135 4.0 6.5 5.2 0.6 146 chr3R 31055503 3` UTR dco - chr3R 31055576 3` UTR dco - chr3R 31055649 3` UTR dco - chr3R_4_31055001 chr3R_31055001 EF39_1-HE 3117 chr3R 31084894 31084930 chr3R 31084996 31085032 4 102 0.5 2.0 1.2 1.8 138 chr3R 31084894 intergenic not near genes chr3R 31084963 intergenic not near genes chr3R 31085032 intergenic not near genes chr3R_4_31080001 chr3R_31080001 EF39_1-HE 3118 chr3R 31135110 31135150 chr3R 31135245 31135285 17 135 2.0 3.5 2.8 4.5 175 chr3R 31135110 intron Gycbeta100B + chr3R 31135198 intron Gycbeta100B + chr3R 31135285 intron Gycbeta100B + chr3R_17_31135001 chr3R_31135001 EF39_1-HE 3119 chr3R 31150240 31150293 chr3R 31150346 31150378 13 99 1.5 4.5 3.0 3.2 138 chr3R 31150240 intron Gycbeta100B + chr3R 31150309 intron Gycbeta100B + chr3R 31150378 intron Gycbeta100B + chr3R_13_31150001 chr3R_31150001 EF39_1-HE 3120 chr3R 31268792 31268809 chr3R 31268911 31268928 4 119 2.5 0.0 1.2 1.8 136 chr3R 31268792 intergenic ppk24 + chr3R 31268860 intergenic ppk24 + chr3R 31268928 intergenic ppk24 + chr3R_4_31265001 chr3R_31265001 EF39_1-HE 3121 chr3R 31279351 31279409 chr3R 31285568 31285626 diver 10 6216 2.0 5.5 3.8 2.1 6275 chr3R 31279351 intergenic not near genes chr3R 31282488 intergenic not near genes chr3R 31285626 intergenic not near genes chr3R_10_31280001 chr3R_31280001 EF39_1-HE 3122 chr3R 31294128 31294158 chr3R 31294667 31294697 8 536 2.0 4.0 3.0 2.0 569 chr3R 31294128 intergenic not near genes chr3R 31294412 intergenic not near genes chr3R 31294697 intergenic not near genes chr3R_8_31290001 chr3R_31290001 EF39_1-HE 3123 chr3R 31347205 31347248 chr3R 31347316 31347359 20 110 6.5 4.5 5.5 3.1 154 chr3R 31347205 intron CG34347 + chr3R 31347282 intron CG34347 + chr3R 31347359 intron CG34347 + chr3R_20_31345001 chr3R_31345001 EF39_1-HE 3124 chr3R 31354820 31354870 chr3R 31354925 31354976 14 106 9.0 5.0 7.0 1.8 156 chr3R 31354820 intron CG34347 + chr3R 31354898 intron CG34347 + chr3R 31354976 intron CG34347 + chr3R_14_31350001 chr3R_31350001 EF39_1-HE 3125 chr3R 31413073 31413123 chr3R 31418299 31418316 copia 8 5220 1.5 2.0 1.8 2.9 5243 chr3R 31413073 intron Gprk2 + chr3R 31415694 intron Gprk2 + chr3R 31418316 intron Gprk2 + chr3R_8_31415001 chr3R_31415001 EF39_1-HE 3126 chr3R 31418762 31418804 chr3R 31418906 31418946 11 142 1.5 2.0 1.8 3.9 184 chr3R 31418762 intron Gprk2 + chr3R 31418854 intron Gprk2 + chr3R 31418946 intron Gprk2 + chr3R_11_31415001 chr3R_31415001 EF39_1-HE 3127 chr3R 31420554 31420573 chr3R 31420666 31420677 5 109 4.5 4.5 4.5 0.9 123 chr3R 31420554 intron Gprk2 + chr3R 31420616 intron Gprk2 + chr3R 31420677 intron Gprk2 + chr3R_5_31420001 chr3R_31420001 EF39_1-HE 3128 chr3R 31421203 31421241 chr3R 31421315 31421353 10 112 5.0 5.0 5.0 1.7 150 chr3R 31421203 intron Gprk2 + chr3R 31421278 intron Gprk2 + chr3R 31421353 intron Gprk2 + chr3R_10_31420001 chr3R_31420001 EF39_1-HE 3129 chr3R 31422623 31422659 chr3R 31422811 31422847 5 188 0.5 0.0 0.2 4.2 224 chr3R 31422623 intron Gprk2 + chr3R 31422735 intron Gprk2 + chr3R 31422847 intron Gprk2 + chr3R_5_31420001 chr3R_31420001 EF39_1-HE 3130 chr3R 31426859 31426907 chr3R 31426977 31427025 6 118 2.0 2.0 2.0 2.0 166 chr3R 31426859 intron Gprk2 + chr3R 31426942 intron Gprk2 + chr3R 31427025 intron Gprk2 + chr3R_6_31425001 chr3R_31425001 EF39_1-HE 3131 chr3R 31510414 31510433 chr3R 31510569 31510588 4 155 3.5 3.5 3.5 0.9 174 chr3R 31510414 intergenic not near genes chr3R 31510501 intergenic not near genes chr3R 31510588 intergenic not near genes chr3R_4_31510001 chr3R_31510001 EF39_1-HE 3132 chr3R 31530819 31530830 chr3R 31531154 31531182 7 345 3.5 3.5 3.5 1.6 363 chr3R 31530819 intergenic not near genes chr3R 31531000 intergenic not near genes chr3R 31531182 intergenic not near genes chr3R_7_31530001 chr3R_31530001 EF39_1-HE 3133 chr3R 31530837 31530847 chr3R 31531144 31531199 5 341 1.0 3.0 2.0 1.7 362 chr3R 31530837 intergenic not near genes chr3R 31531018 intergenic not near genes chr3R 31531199 intergenic not near genes chr3R_5_31530001 chr3R_31530001 EF39_1-HE 3134 chr3R 31553871 31553913 chr3R 31553994 31554043 8 129 5.0 5.0 5.0 1.3 172 chr3R 31553871 intron nyo + chr3R 31553957 intron nyo + chr3R 31554043 intron nyo + chr3R_8_31550001 chr3R_31550001 EF39_1-HE 3135 chr3R 31599729 31599752 chr3R 31599845 31599868 5 116 1.0 2.0 1.5 2.0 139 chr3R 31599729 intron CycG - chr3R 31599798 intron CycG - chr3R 31599868 intron CycG - chr3R_5_31595001 chr3R_31595001 EF39_1-HE 3136 chr3R 31606114 31606125 chr3R 31606323 31606334 5 209 5.5 0.0 2.8 1.3 220 chr3R 31606114 intron CycG - chr3R 31606224 intron CycG - chr3R 31606334 intron CycG - chr3R_5_31605001 chr3R_31605001 EF39_1-HE 3137 chr3R 31610091 31610141 chr3R 31610203 31610252 12 112 2.0 1.0 1.5 4.8 161 chr3R 31610091 intron CycG - chr3R 31610172 intron CycG - chr3R 31610252 intron CycG - chr3R_12_31610001 chr3R_31610001 EF39_1-HE 3138 chr3R 31621183 31621238 chr3R 31622205 31622254 17 1017 25.5 24.0 24.8 0.7 1071 chr3R 31621183 3` UTR pasha + chr3R 31621718 intron pasha + chr3R 31622254 5` UTR kek6 + chr3R_17_31620001 chr3R_31620001 EF39_1-HE 3139 chr3R 31623299 31623355 chr3R 31623412 31623462 15 112 2.5 3.0 2.8 3.9 163 chr3R 31623299 intron kek6 + chr3R 31623380 intron kek6 + chr3R 31623462 intron kek6 + chr3R_15_31620001 chr3R_31620001 EF39_1-HE 3140 chr3R 31630039 31630083 chr3R 31630170 31630214 10 131 4.0 11.5 7.8 1.1 175 chr3R 31630039 intron kek6 + chr3R 31630126 intron kek6 + chr3R 31630214 intron kek6 + chr3R_10_31630001 chr3R_31630001 EF39_1-HE 3141 chr3R 31632848 31632907 chr3R 31633229 31633288 19 380 5.5 4.5 5.0 3.2 440 chr3R 31632848 intron kek6 + chr3R 31633068 intron kek6 + chr3R 31633288 intron kek6 + chr3R_19_31630001 chr3R_31630001 EF39_1-HE 3142 chr3R 31691508 31691563 chr3R 31696300 31696355 Doc 20 4792 3.5 3.5 3.5 4.4 4847 chr3R 31691508 intergenic not near genes chr3R 31693932 intergenic not near genes chr3R 31696355 intergenic not near genes chr3R_20_31690001 chr3R_31690001 EF39_1-HE 3143 chr3R 31699700 31699739 chr3R 31699808 31699811 10 104 10.0 4.0 7.0 1.2 111 chr3R 31699700 intergenic not near genes chr3R 31699756 intergenic not near genes chr3R 31699811 intergenic not near genes chr3R_10_31695001 chr3R_31695001 EF39_1-HE 3144 chr3R 31828735 31828786 chr3R 31828956 31829009 9 223 1.5 7.0 4.2 1.7 274 chr3R 31828735 intron RhoGAP100F + chr3R 31828872 intron RhoGAP100F + chr3R 31829009 intron RhoGAP100F + chr3R_9_31825001 chr3R_31825001 EF39_1-HE 3145 chr3R 31860645 31860700 chr3R 31860753 31860808 16 108 3.5 4.5 4.0 3.2 163 chr3R 31860645 intron heph - chr3R 31860726 intron heph - chr3R 31860808 intron heph - chr3R_16_31860001 chr3R_31860001 EF39_1-HE 3146 chr3R 31917409 31917464 chr3R 31917513 31917568 7 104 3.0 1.5 2.2 2.2 159 chr3R 31917409 intron heph - chr3R 31917488 intron heph - chr3R 31917568 intron heph - chr3R_7_31915001 chr3R_31915001 EF39_1-HE 3147 chr3R 31920754 31920802 chr3R 31920862 31920910 8 108 1.5 2.5 2.0 2.7 156 chr3R 31920754 intron heph - chr3R 31920832 intron heph - chr3R 31920910 intron heph - chr3R_8_31920001 chr3R_31920001 EF39_1-HE 3148 chr3R 31954900 31954948 chr3R 31955839 31955887 17 939 3.0 5.0 4.0 3.4 987 chr3R 31954900 intron heph - chr3R 31955394 intron heph - chr3R 31955887 intron heph - chr3R_17_31955001 chr3R_31955001 EF39_1-HE 3149 chr3R 31997966 31998016 chr3R 32005462 32005512 blood 16 7496 3.5 2.0 2.8 4.2 7546 chr3R 31997966 intron heph - chr3R 32001739 intron heph - chr3R 32005512 intron heph - chr3R_16_32000001 chr3R_32000001 EF39_1-HE 3150 chr3R 32022951 32022987 chr3R 32023520 32023555 9 569 34.5 21.5 28.0 0.3 604 chr3R 32022951 5` UTR CR45557 + chr3R 32023253 5` UTR CR45557 + chr3R 32023555 5` UTR CR45557 + chr3R_9_32020001 chr3R_32020001 EF39_1-HE 3151 chr4 76472 76513 chr4 81941 81981 I-element 18 5469 10.0 4.5 7.2 2.2 5509 chr4 76472 intron pan + chr4 79226 intron pan + chr4 81981 intron pan + chr4_18_75001 chr4_75001 EF39_1-HE 3152 chr4 97176 97216 chr4 97282 97322 6 106 15.5 18.0 16.8 0.3 146 chr4 97176 intron pan + chr4 97249 intron pan + chr4 97322 intron pan + chr4_6_95001 chr4_95001 EF39_1-HE 3153 chr4 158739 158787 chr4 158930 158978 8 191 8.0 8.0 8.0 0.9 239 chr4 158739 intron CG33978 - chr4 158858 intron CG33978 - chr4 158978 intron CG33978 - chr4_8_155001 chr4_155001 EF39_1-HE 3154 chr4 319967 320000 chr4 328169 328202 Stalker2 6 8202 4.5 2.0 3.2 1.4 8235 chr4 319967 3` UTR CG32850 + chr4 324084 intron CG32850 + chr4 328202 3` UTR,3` UTR CG32850 +,PMCA - chr4_6_320001 chr4_320001 EF39_1-HE 3155 chr4 336235 336279 chr4 336428 336469 12 193 15.0 16.0 15.5 0.7 234 chr4 336235 intron PMCA - chr4 336352 intron PMCA - chr4 336469 intron PMCA - chr4_12_335001 chr4_335001 EF39_1-HE 3156 chr4 418137 418180 chr4 418243 418286 8 106 29.0 25.0 27.0 0.3 149 chr4 418137 intergenic not near genes chr4 418212 intergenic not near genes chr4 418286 intergenic not near genes chr4_8_415001 chr4_415001 EF39_1-HE 3157 chr4 419463 419519 chr4 419668 419724 9 205 47.5 43.5 45.5 0.2 261 chr4 419463 intergenic not near genes chr4 419594 intergenic not near genes chr4 419724 intergenic not near genes chr4_9_415001 chr4_415001 EF39_1-HE 3158 chr4 518088 518138 chr4 518195 518244 7 105 21.5 15.5 18.5 0.4 156 chr4 518088 intron zfh2 + chr4 518166 intron zfh2 + chr4 518244 intron zfh2 + chr4_7_515001 chr4_515001 EF39_1-HE 3159 chr4 671581 671628 chr4 680190 680237 Tirant 32 8609 8.5 12.5 10.5 2.8 8656 chr4 671581 intron CG11360 + chr4 675909 intron CG11360 + chr4 680237 intron CG11360 + chr4_32_675001 chr4_675001 EF39_1-HE 3160 chr4 688249 688299 chr4 688366 688416 12 117 12.0 17.5 14.8 0.8 167 chr4 688249 3` UTR CG11360 + chr4 688332 3` UTR CG11360 + chr4 688416 3` UTR CG11360 + chr4_12_685001 chr4_685001 EF39_1-HE 3161 chr4 694881 694931 chr4 694988 695038 8 107 12.0 16.0 14.0 0.5 157 chr4 694881 intron myo - chr4 694960 intron myo - chr4 695038 intron myo - chr4_8_690001 chr4_690001 EF39_1-HE 3162 chr4 847072 847103 chr4 847294 847325 11 222 8.5 3.5 6.0 1.6 253 chr4 847072 intergenic not near genes chr4 847198 intergenic not near genes chr4 847325 intergenic not near genes chr4_11_845001 chr4_845001 EF39_1-HE 3163 chr4 959609 959645 chr4 959814 959850 6 205 14.5 15.0 14.8 0.4 241 chr4 959609 intergenic CR44030 +,CR45201 - chr4 959730 5` UTR CR44030 + chr4 959850 5` UTR CR44030 + chr4_6_955001 chr4_955001 EF39_1-HE 3164 chr4 972483 972526 chr4 972591 972634 8 108 11.5 17.0 14.2 0.5 151 chr4 972483 intron fuss - chr4 972558 intron fuss - chr4 972634 intron fuss - chr4_8_970001 chr4_970001 EF39_1-HE 3165 chr4 1077688 1077734 chr4 1077831 1077877 18 143 16.0 17.0 16.5 1.0 189 chr4 1077688 3` UTR Actbeta - chr4 1077782 3` UTR Actbeta - chr4 1077877 intron Actbeta - chr4_18_1075001 chr4_1075001 EF39_1-HE 3166 chr4 1171925 1171969 chr4 1172215 1172260 10 291 12.0 7.0 9.5 1.0 335 chr4 1171925 intergenic not near genes chr4 1172092 intergenic pho - chr4 1172260 intergenic pho - chr4_10_1170001 chr4_1170001 EF39_1-HE 3167 chr4 1181791 1181845 chr4 1182171 1182225 10 380 23.0 39.0 31.0 0.3 434 chr4 1181791 intergenic pho - chr4 1182008 intergenic pho - chr4 1182225 intergenic not near genes chr4_10_1180001 chr4_1180001 EF39_1-HE 3168 chr4 1250539 1250573 chr4 1250651 1250685 7 112 5.0 1.5 3.2 1.7 146 chr4 1250539 intron Caps + chr4 1250612 intron Caps + chr4 1250685 intron Caps + chr4_7_1250001 chr4_1250001 EF39_1-HE 3169 chrX 295830 295879 chrX 303476 303525 412 19 7646 5.0 7.5 6.2 2.6 7695 chrX 295830 intron CG3777 + chrX 299678 intron CG3777 + chrX 303525 intron CG3777 + chrX_19_295001 chrX_295001 EF39_1-HE 3170 chrX 318451 318496 chrX 323563 323608 flea 29 5112 8.5 9.0 8.8 3.0 5157 chrX 318451 intron,intron CG3777 +,CG32816 - chrX 321030 intron,intron CG3777 +,CG32816 - chrX 323608 intron,intron CG3777 +,CG32816 - chrX_29_320001 chrX_320001 EF39_1-HE 3171 chrX 383291 383345 chrX 383399 383453 24 108 5.5 5.0 5.2 3.9 162 chrX 383291 intron CG32816 - chrX 383372 intron CG32816 - chrX 383453 intron CG32816 - chrX_24_380001 chrX_380001 EF39_1-HE 3172 chrX 428399 428407 chrX 434610 434618 3S18 4 6211 5.5 3.0 4.2 0.8 6219 chrX 428399 intron CG32816 - chrX 431508 intron CG32816 - chrX 434618 intron CG32816 - chrX_4_430001 chrX_430001 EF39_1-HE 3173 chrX 428412 428442 chrX 434623 434653 3S18 8 6211 3.5 4.5 4.0 1.6 6241 chrX 428412 intron CG32816 - chrX 431532 intron CG32816 - chrX 434653 intron CG32816 - chrX_8_430001 chrX_430001 EF39_1-HE 3174 chrX 450341 450392 chrX 450445 450496 10 104 8.0 5.0 6.5 1.3 155 chrX 450341 intron CG32816 - chrX 450418 intron CG32816 - chrX 450496 intron CG32816 - chrX_10_450001 chrX_450001 EF39_1-HE 3175 chrX 545727 545781 chrX 545875 545929 30 148 11.5 5.5 8.5 3.2 202 chrX 545727 intron Appl + chrX 545828 intron Appl + chrX 545929 intron Appl + chrX_30_545001 chrX_545001 EF39_1-HE 3176 chrX 547605 547663 chrX 547875 547933 34 270 5.5 8.0 6.8 4.4 328 chrX 547605 intron Appl + chrX 547769 intron Appl + chrX 547933 intron Appl + chrX_34_545001 chrX_545001 EF39_1-HE 3177 chrX 551403 551455 chrX 558990 559043 412 29 7586 6.5 7.5 7.0 3.6 7640 chrX 551403 intron Appl + chrX 555223 intron Appl + chrX 559043 intron Appl + chrX_29_555001 chrX_555001 EF39_1-HE 3178 chrX 667624 667663 chrX 667734 667773 14 110 6.5 1.0 3.8 2.9 149 chrX 667624 intergenic not near genes chrX 667698 intergenic not near genes chrX 667773 intergenic not near genes chrX_14_665001 chrX_665001 EF39_1-HE 3179 chrX 680823 680868 chrX 680932 680977 14 108 2.5 4.0 3.2 3.3 154 chrX 680823 intergenic not near genes chrX 680900 intergenic not near genes chrX 680977 intergenic not near genes chrX_14_680001 chrX_680001 EF39_1-HE 3180 chrX 706773 706824 chrX 707164 707214 10 391 0.0 7.5 3.8 2.1 441 chrX 706773 intron sdk + chrX 706994 intron sdk + chrX 707214 intron sdk + chrX_10_705001 chrX_705001 EF39_1-HE 3181 chrX 708753 708798 chrX 708879 708917 13 125 3.0 3.0 3.0 3.2 164 chrX 708753 intron sdk + chrX 708835 intron sdk + chrX 708917 intron sdk + chrX_13_705001 chrX_705001 EF39_1-HE 3182 chrX 765674 765720 chrX 765959 766005 12 285 2.5 2.5 2.5 3.4 331 chrX 765674 5` UTR CR44966 + chrX 765840 5` UTR CR44966 + chrX 766005 5` UTR CR44966 + chrX_12_765001 chrX_765001 EF39_1-HE 3183 chrX 778107 778154 chrX 778223 778270 13 116 4.5 0.0 2.2 4.1 163 chrX 778107 intron fz3 + chrX 778188 intron fz3 + chrX 778270 intron fz3 + chrX_13_775001 chrX_775001 EF39_1-HE 3184 chrX 806745 806778 chrX 806879 806890 5 130 0.0 1.0 0.5 3.3 145 chrX 806745 intron Sec22 + chrX 806818 intron Sec22 + chrX 806890 intron Sec22 + chrX_5_805001 chrX_805001 EF39_1-HE 3185 chrX 812248 812287 chrX 817907 817946 297 10 5659 3.5 3.5 3.5 2.2 5698 chrX 812248 intron CG43867 - chrX 815097 intron CG43867 - chrX 817946 intron CG43867 - chrX_10_815001 chrX_815001 EF39_1-HE 3186 chrX 827581 827631 chrX 835399 835449 roo 14 7818 7.0 4.0 5.5 2.2 7868 chrX 827581 intron CG43867 - chrX 831515 intron CG43867 - chrX 835449 intron CG43867 - chrX_14_830001 chrX_830001 EF39_1-HE 3187 chrX 868478 868506 chrX 868581 868609 7 102 3.5 8.0 5.8 1.0 131 chrX 868478 intron CG43867 - chrX 868544 intron CG43867 - chrX 868609 intron CG43867 - chrX_7_865001 chrX_865001 EF39_1-HE 3188 chrX 906687 906733 chrX 908502 908548 S-element 16 1813 5.0 6.5 5.8 2.4 1861 chrX 906687 intron CG43867 - chrX 907618 intron CG43867 - chrX 908548 intron CG43867 - chrX_16_905001 chrX_905001 EF39_1-HE 3189 chrX 1141152 1141211 chrX 1141378 1141437 12 226 2.0 4.5 3.2 2.9 285 chrX 1141152 intergenic not near genes chrX 1141294 intergenic not near genes chrX 1141437 intergenic not near genes chrX_12_1140001 chrX_1140001 EF39_1-HE 3190 chrX 1142174 1142177 chrX 1142281 1142284 4 107 6.0 5.0 5.5 0.6 110 chrX 1142174 intergenic not near genes chrX 1142229 intergenic not near genes chrX 1142284 intergenic not near genes chrX_4_1140001 chrX_1140001 EF39_1-HE 3191 chrX 1153170 1153217 chrX 1153279 1153326 17 109 6.5 11.5 9.0 1.7 156 chrX 1153170 intergenic not near genes chrX 1153248 intergenic not near genes chrX 1153326 intergenic not near genes chrX_17_1150001 chrX_1150001 EF39_1-HE 3192 chrX 1169201 1169235 chrX 1169305 1169332 13 103 7.5 8.5 8.0 1.4 131 chrX 1169201 intergenic not near genes chrX 1169266 intergenic not near genes chrX 1169332 intergenic not near genes chrX_13_1165001 chrX_1165001 EF39_1-HE 3193 chrX 1185538 1185575 chrX 1185643 1185680 17 105 8.0 8.5 8.2 1.8 142 chrX 1185538 intron CG14626 + chrX 1185609 intron CG14626 + chrX 1185680 intron CG14626 + chrX_17_1185001 chrX_1185001 EF39_1-HE 3194 chrX 1266026 1266046 chrX 1266129 1266149 10 103 5.0 5.5 5.2 1.6 123 chrX 1266026 intron Atf3 - chrX 1266088 intron Atf3 - chrX 1266149 intron Atf3 - chrX_10_1265001 chrX_1265001 EF39_1-HE 3195 chrX 1317465 1317518 chrX 1317623 1317676 11 160 22.5 21.5 22.0 0.5 211 chrX 1317465 intron DAAM - chrX 1317570 intron DAAM - chrX 1317676 intron DAAM - chrX_11_1315001 chrX_1315001 EF39_1-HE 3196 chrX 1357755 1357802 chrX 1367951 1367998 Doc 11 10196 4.0 7.5 5.8 1.6 10243 chrX 1357755 intergenic png - chrX 1362876 intergenic not near genes chrX 1367998 intergenic not near genes chrX_11_1360001 chrX_1360001 EF39_1-HE 3197 chrX 1373965 1373996 chrX 1374255 1374286 7 290 4.0 4.0 4.0 1.4 321 chrX 1373965 3` UTR ssx + chrX 1374126 3` UTR ssx + chrX 1374286 3` UTR ssx + chrX_7_1370001 chrX_1370001 EF39_1-HE 3198 chrX 1387002 1387031 chrX 1387106 1387135 7 103 9.5 9.0 9.2 0.7 133 chrX 1387002 intron CG32813 + chrX 1387068 intron CG32813 + chrX 1387135 intron CG32813 + chrX_7_1385001 chrX_1385001 EF39_1-HE 3199 chrX 1627289 1627305 chrX 1627392 1627408 10 103 20.0 22.5 21.2 0.5 119 chrX 1627289 intron,intron Mur2B -,br + chrX 1627348 intron,intron Mur2B -,br + chrX 1627408 intron,intron Mur2B -,br + chrX_10_1625001 chrX_1625001 EF39_1-HE 3200 chrX 1627965 1627975 chrX 1635451 1635469 gtwin 9 7492 16.0 8.5 12.2 0.7 7504 chrX 1627965 intron,intron Mur2B -,br + chrX 1631717 intron,intron Mur2B -,br + chrX 1635469 intron,intron Mur2B -,br + chrX_9_1630001 chrX_1630001 EF39_1-HE 3201 chrX 1657746 1657785 chrX 1657851 1657890 9 105 3.5 2.5 3.0 2.2 144 chrX 1657746 intron Mur2B - chrX 1657818 intron Mur2B - chrX 1657890 intron Mur2B - chrX_9_1655001 chrX_1655001 EF39_1-HE 3202 chrX 1813213 1813255 chrX 1813336 1813378 13 123 8.0 9.0 8.5 1.4 165 chrX 1813213 intron CG42666 + chrX 1813296 intron CG42666 + chrX 1813378 intron CG42666 + chrX_13_1810001 chrX_1810001 EF39_1-HE 3203 chrX 1837288 1837309 chrX 1837399 1837420 9 111 7.0 5.0 6.0 1.3 132 chrX 1837288 intron CG42666 + chrX 1837354 intron CG42666 + chrX 1837420 intron CG42666 + chrX_9_1835001 chrX_1835001 EF39_1-HE 3204 chrX 1837312 1837332 chrX 1837389 1837443 9 107 3.0 3.5 3.2 2.1 131 chrX 1837312 intron CG42666 + chrX 1837378 intron CG42666 + chrX 1837443 intron CG42666 + chrX_9_1835001 chrX_1835001 EF39_1-HE 3205 chrX 1930514 1930567 chrX 1938111 1938164 opus 7 7597 2.0 1.5 1.8 2.5 7650 chrX 1930514 3` UTR CG11596 + chrX 1934339 intergenic not near genes chrX 1938164 3` UTR CG3857 - chrX_7_1930001 chrX_1930001 EF39_1-HE 3206 chrX 1954861 1954915 chrX 1962827 1962880 Stalker2 6 7964 3.5 4.0 3.8 1.2 8019 chrX 1954861 intron Hr4 + chrX 1958870 intron Hr4 + chrX 1962880 intron Hr4 + chrX_6_1955001 chrX_1955001 EF39_1-HE 3207 chrX 2095909 2095940 chrX 2096011 2096042 12 102 4.5 0.0 2.2 3.8 133 chrX 2095909 intron csw + chrX 2095976 intron csw + chrX 2096042 intron csw + chrX_12_2095001 chrX_2095001 EF39_1-HE 3208 chrX 2164368 2164395 chrX 2164481 2164508 6 112 8.0 7.0 7.5 0.7 140 chrX 2164368 intron CG3630 + chrX 2164438 intron CG3630 + chrX 2164508 intron CG3630 + chrX_6_2160001 chrX_2160001 EF39_1-HE 3209 chrX 2301221 2301275 chrX 2301367 2301421 10 146 2.5 4.5 3.5 2.2 200 chrX 2301221 intron phl + chrX 2301321 intron phl + chrX 2301421 intron phl + chrX_10_2300001 chrX_2300001 EF39_1-HE 3210 chrX 2308125 2308175 chrX 2308486 2308536 19 361 8.0 4.5 6.2 2.6 411 chrX 2308125 intron phl + chrX 2308330 intron phl + chrX 2308536 intron phl + chrX_19_2305001 chrX_2305001 EF39_1-HE 3211 chrX 2335129 2335155 chrX 2335232 2335258 7 103 10.5 4.5 7.5 0.8 129 chrX 2335129 intron phl + chrX 2335194 intron phl + chrX 2335258 intron phl + chrX_7_2335001 chrX_2335001 EF39_1-HE 3212 chrX 2385705 2385752 chrX 2385810 2385857 10 105 4.5 2.5 3.5 2.2 152 chrX 2385705 exon PsGEF - chrX 2385781 intron PsGEF - chrX 2385857 intron PsGEF - chrX_10_2385001 chrX_2385001 EF39_1-HE 3213 chrX 2393723 2393759 chrX 2393845 2393881 24 122 7.0 7.5 7.2 2.9 158 chrX 2393723 intergenic not near genes chrX 2393802 intergenic not near genes chrX 2393881 intergenic not near genes chrX_24_2390001 chrX_2390001 EF39_1-HE 3214 chrX 2399818 2399871 chrX 2408197 2408238 roo 9 8375 4.0 0.0 2.0 3.0 8420 chrX 2399818 intergenic not near genes chrX 2404028 intergenic not near genes chrX 2408238 intergenic not near genes chrX_9_2400001 chrX_2400001 EF39_1-HE 3215 chrX 2440949 2441003 chrX 2441128 2441169 14 173 1.0 2.5 1.8 5.0 220 chrX 2440949 intergenic not near genes chrX 2441059 intergenic not near genes chrX 2441169 intergenic not near genes chrX_14_2440001 chrX_2440001 EF39_1-HE 3216 chrX 2516053 2516064 chrX 2516159 2516170 7 105 4.5 6.5 5.5 1.1 117 chrX 2516053 intron trol - chrX 2516112 intron trol - chrX 2516170 intron trol - chrX_7_2515001 chrX_2515001 EF39_1-HE 3217 chrX 2517499 2517532 chrX 12419821 12419821 5 9902312 7.0 2.0 4.5 0.9 9902322 chrX 2517499 intron trol - chrX 7468660 intergenic not near genes chrX 12419821 intergenic not near genes chrX_5_7465001 chrX_7465001 EF39_1-HE 3218 chrX 2521926 2521945 chrX 2522030 2522049 7 103 5.5 1.0 3.2 1.7 123 chrX 2521926 intron trol - chrX 2521988 intron trol - chrX 2522049 intron trol - chrX_7_2520001 chrX_2520001 EF39_1-HE 3219 chrX 2578542 2578826 chrX 2578729 2578944 8 127 3.0 13.5 8.2 0.9 402 chrX 2578542 3` UTR Pdfr + chrX 2578743 intergenic Pdfr +,Vha36-3 - chrX 2578944 intergenic Vha36-3 -,Pdfr + chrX_8_2575001 chrX_2575001 EF39_1-HE 3220 chrX 2664349 2664402 chrX 2665531 2665590 1360 25 1182 8.5 0.0 4.2 4.8 1241 chrX 2664349 intron sgg + chrX 2664970 intron sgg + chrX 2665590 intron sgg + chrX_25_2660001 chrX_2660001 EF39_1-HE 3221 chrX 2741965 2742009 chrX 2742084 2742134 7 121 1.0 0.0 0.5 4.7 169 chrX 2741965 exon,intron Syx4 -,kirre + chrX 2742050 intron,intron Syx4 -,kirre + chrX 2742134 intron,intron Syx4 -,kirre + chrX_7_2740001 chrX_2740001 EF39_1-HE 3222 chrX 2841266 2841299 chrX 2841380 2841413 8 115 4.0 0.0 2.0 2.7 147 chrX 2841266 intron kirre + chrX 2841340 intron kirre + chrX 2841413 intron kirre + chrX_8_2840001 chrX_2840001 EF39_1-HE 3223 chrX 2844883 2844932 chrX 2852318 2852368 mdg1 22 7436 5.0 7.5 6.2 3.1 7485 chrX 2844883 intron kirre + chrX 2848626 intron kirre + chrX 2852368 intron kirre + chrX_22_2845001 chrX_2845001 EF39_1-HE 3224 chrX 2874969 2875000 chrX 2875072 2875103 10 103 5.0 7.5 6.2 1.4 134 chrX 2874969 intron kirre + chrX 2875036 intron kirre + chrX 2875103 intron kirre + chrX_10_2875001 chrX_2875001 EF39_1-HE 3225 chrX 2959288 2959340 chrX 2959392 2959444 9 104 2.0 2.0 2.0 3.0 156 chrX 2959288 intron,intron kirre +,rst - chrX 2959366 intron,intron kirre +,rst - chrX 2959444 intron,intron kirre +,rst - chrX_9_2955001 chrX_2955001 EF39_1-HE 3226 chrX 2965936 2965993 chrX 2966039 2966095 15 103 2.5 4.5 3.5 3.3 159 chrX 2965936 intron,intron kirre +,rst - chrX 2966016 intron,5` UTR kirre +,rst - chrX 2966095 intron,intron kirre +,rst - chrX_15_2965001 chrX_2965001 EF39_1-HE 3227 chrX 3057998 3058046 chrX 3058265 3058313 pogo 9 267 5.0 1.0 3.0 2.2 315 chrX 3057998 intron kirre + chrX 3058156 intron kirre + chrX 3058313 intron kirre + chrX_9_3055001 chrX_3055001 EF39_1-HE 3228 chrX 3075606 3075663 chrX 3080940 3080995 Transpac 15 5333 2.5 2.5 2.5 4.3 5389 chrX 3075606 intron kirre + chrX 3078300 intron kirre + chrX 3080995 intron kirre + chrX_15_3075001 chrX_3075001 EF39_1-HE 3229 chrX 3120636 3120642 chrX 3120739 3120745 5 103 5.0 2.0 3.5 1.1 109 chrX 3120636 intron kirre + chrX 3120690 intron kirre + chrX 3120745 intron kirre + chrX_5_3120001 chrX_3120001 EF39_1-HE 3230 chrX 3193299 3193311 chrX 3193405 3193417 4 106 3.0 0.5 1.8 1.4 118 chrX 3193299 intron dnc + chrX 3193358 intron dnc + chrX 3193417 intron dnc + chrX_4_3190001 chrX_3190001 EF39_1-HE 3231 chrX 3218489 3218534 chrX 3227664 3227709 roo 5 9175 1.0 1.5 1.2 2.3 9220 chrX 3218489 intron dnc + chrX 3223099 intron dnc + chrX 3227709 intron dnc + chrX_5_3220001 chrX_3220001 EF39_1-HE 3232 chrX 3230809 3230847 chrX 3230920 3230958 4 111 2.0 3.0 2.5 1.1 149 chrX 3230809 intron dnc + chrX 3230884 intron dnc + chrX 3230958 intron dnc + chrX_4_3230001 chrX_3230001 EF39_1-HE 3233 chrX 3235624 3235652 chrX 3236009 3236037 8 384 5.0 1.5 3.2 1.9 413 chrX 3235624 intron dnc + chrX 3235830 intron dnc + chrX 3236037 intron dnc + chrX_8_3235001 chrX_3235001 EF39_1-HE 3234 chrX 3275503 3275551 chrX 3275616 3275664 11 113 3.0 5.0 4.0 2.2 161 chrX 3275503 intron dnc + chrX 3275584 intron dnc + chrX 3275664 intron dnc + chrX_11_3275001 chrX_3275001 EF39_1-HE 3235 chrX 3280239 3280251 chrX 3280342 3280354 7 102 14.0 9.0 11.5 0.6 115 chrX 3280239 intron dnc + chrX 3280296 intron dnc + chrX 3280354 intron dnc + chrX_7_3280001 chrX_3280001 EF39_1-HE 3236 chrX 3288902 3288924 chrX 3289005 3289027 11 103 6.5 4.5 5.5 1.7 125 chrX 3288902 intron dnc + chrX 3288964 intron dnc + chrX 3289027 intron dnc + chrX_11_3285001 chrX_3285001 EF39_1-HE 3237 chrX 3295677 3295715 chrX 3295800 3295836 9 121 4.0 1.5 2.8 2.4 159 chrX 3295677 intron dnc + chrX 3295756 intron dnc + chrX 3295836 intron dnc + chrX_9_3295001 chrX_3295001 EF39_1-HE 3238 chrX 3351775 3351803 chrX 3351892 3351921 7 112 2.0 2.5 2.2 2.2 146 chrX 3351775 intergenic not near genes chrX 3351848 intergenic not near genes chrX 3351921 intergenic not near genes chrX_7_3350001 chrX_3350001 EF39_1-HE 3239 chrX 3364076 3364104 chrX 3364187 3364215 4 111 5.5 0.0 2.8 1.1 139 chrX 3364076 intergenic not near genes chrX 3364146 intergenic not near genes chrX 3364215 intergenic not near genes chrX_4_3360001 chrX_3360001 EF39_1-HE 3240 chrX 3415019 3415048 chrX 3421230 3421259 3S18 5 6211 1.5 2.5 2.0 1.7 6240 chrX 3415019 intron,intron CR44999 +,CG12535 - chrX 3418139 intron,intron CR44999 +,CG12535 - chrX 3421259 intron,intron CR44999 +,CG12535 - chrX_5_3415001 chrX_3415001 EF39_1-HE 3241 chrX 3421226 3421270 chrX 3421330 3421374 16 104 2.5 1.0 1.8 5.7 148 chrX 3421226 intron,intron CR44999 +,CG12535 - chrX 3421300 intron,intron CR44999 +,CG12535 - chrX 3421374 intron,intron CR44999 +,CG12535 - chrX_16_3420001 chrX_3420001 EF39_1-HE 3242 chrX 3433402 3433430 chrX 3433513 3433541 8 109 6.5 9.5 8.0 0.9 139 chrX 3433402 intron,intron CR44999 +,CG12535 - chrX 3433472 intron,intron CR44999 +,CG12535 - chrX 3433541 intron,intron CR44999 +,CG12535 - chrX_8_3430001 chrX_3430001 EF39_1-HE 3243 chrX 3476314 3476368 chrX 3476423 3476479 7 110 3.0 1.5 2.2 2.2 165 chrX 3476314 intron CR44999 + chrX 3476396 intron CR44999 + chrX 3476479 intron,3` UTR CR44999 +,CG10804 - chrX_7_3475001 chrX_3475001 EF39_1-HE 3244 chrX 3493065 3493111 chrX 3502249 3502296 roo 11 9185 4.0 1.5 2.8 2.9 9231 chrX 3493065 intron,intron CR44999 +,Gas8 - chrX 3497680 intron,intron CR44999 +,Gas8 - chrX 3502296 intron,intron CR44999 +,Gas8 - chrX_11_3495001 chrX_3495001 EF39_1-HE 3245 chrX 3535379 3535433 chrX 3535497 3535555 7 114 2.0 0.0 1.0 3.5 176 chrX 3535379 intron CG32791 - chrX 3535467 intron CG32791 - chrX 3535555 intron CG32791 - chrX_7_3535001 chrX_3535001 EF39_1-HE 3246 chrX 3574531 3574547 chrX 3574638 3574654 4 107 1.0 0.0 0.5 2.7 123 chrX 3574531 intergenic AstA-R1 + chrX 3574592 5` UTR AstA-R1 + chrX 3574654 5` UTR AstA-R1 + chrX_4_3570001 chrX_3570001 EF39_1-HE 3247 chrX 3597086 3597131 chrX 3597200 3597244 16 114 0.0 3.0 1.5 6.4 158 chrX 3597086 intron AstA-R1 + chrX 3597165 intron AstA-R1 + chrX 3597244 intron AstA-R1 + chrX_16_3595001 chrX_3595001 EF39_1-HE 3248 chrX 3597532 3597583 chrX 3619726 3619779 roo 11 22194 6.0 4.5 5.2 1.8 22247 chrX 3597532 intron AstA-R1 + chrX 3608656 intron AstA-R1 + chrX 3619779 intron AstA-R1 + chrX_11_3605001 chrX_3605001 EF39_1-HE 3249 chrX 3622284 3622327 chrX 3622389 3622432 8 105 3.0 1.5 2.2 2.5 148 chrX 3622284 intron AstA-R1 + chrX 3622358 intron AstA-R1 + chrX 3622432 intron AstA-R1 + chrX_8_3620001 chrX_3620001 EF39_1-HE 3250 chrX 3629824 3629880 chrX 3629935 3629990 21 111 5.0 0.0 2.5 6.0 166 chrX 3629824 intron AstA-R1 + chrX 3629907 intron AstA-R1 + chrX 3629990 intron AstA-R1 + chrX_21_3625001 chrX_3625001 EF39_1-HE 3251 chrX 3660681 3660729 chrX 3660802 3660850 8 121 4.5 4.0 4.2 1.5 169 chrX 3660681 intron AstA-R1 + chrX 3660766 intron AstA-R1 + chrX 3660850 intron AstA-R1 + chrX_8_3660001 chrX_3660001 EF39_1-HE 3252 chrX 3662466 3662484 chrX 3662576 3662594 4 110 3.5 0.0 1.8 1.4 128 chrX 3662466 intron AstA-R1 + chrX 3662530 intron AstA-R1 + chrX 3662594 intron AstA-R1 + chrX_4_3660001 chrX_3660001 EF39_1-HE 3253 chrX 3726741 3726774 chrX 3730164 3730197 NOF 5 3422 4.0 0.0 2.0 1.7 3456 chrX 3726741 intron tlk + chrX 3728469 intron tlk + chrX 3730197 intron tlk + chrX_5_3725001 chrX_3725001 EF39_1-HE 3254 chrX 3733919 3733946 chrX 3734022 3734049 11 103 5.5 4.0 4.8 1.9 130 chrX 3733919 intron tlk + chrX 3733984 intron tlk + chrX 3734049 intron tlk + chrX_11_3730001 chrX_3730001 EF39_1-HE 3255 chrX 3768253 3768283 chrX 3768355 3768363 4 96 3.5 3.5 3.5 0.9 110 chrX 3768253 intron tlk + chrX 3768308 intron tlk + chrX 3768363 intron tlk + chrX_4_3765001 chrX_3765001 EF39_1-HE 3256 chrX 3832088 3832094 chrX 3832194 3832195 4 105 4.5 13.5 9.0 0.4 107 chrX 3832088 intron ec + chrX 3832142 intron ec + chrX 3832195 intron ec + chrX_4_3830001 chrX_3830001 EF39_1-HE 3257 chrX 3841539 3841593 chrX 3841644 3841698 10 102 6.0 0.0 3.0 2.5 159 chrX 3841539 intron ec + chrX 3841618 intron ec + chrX 3841698 intron ec + chrX_10_3840001 chrX_3840001 EF39_1-HE 3258 chrX 3842330 3842346 chrX 3842569 3842585 pogo 6 239 7.0 2.0 4.5 1.1 255 chrX 3842330 intron ec + chrX 3842458 intron ec + chrX 3842585 intron ec + chrX_6_3840001 chrX_3840001 EF39_1-HE 3259 chrX 3866082 3866121 chrX 3866186 3866225 10 104 3.5 3.0 3.2 2.4 143 chrX 3866082 intron yin - chrX 3866154 intron yin - chrX 3866225 intron yin - chrX_10_3865001 chrX_3865001 EF39_1-HE 3260 chrX 3930019 3930054 chrX 3930126 3930238 7 129 5.5 0.5 3.0 1.8 219 chrX 3930019 5` UTR CG42541 - chrX 3930128 5` UTR CG42541 - chrX 3930238 5` UTR CG42541 - chrX_7_3930001 chrX_3930001 EF39_1-HE 3261 chrX 3986860 3986878 chrX 3994518 3994535 412 6 7658 7.0 0.0 3.5 1.3 7675 chrX 3986860 intergenic not near genes chrX 3990698 intergenic not near genes chrX 3994535 intergenic not near genes chrX_6_3990001 chrX_3990001 EF39_1-HE 3262 chrX 4101849 4101888 chrX 4101954 4101994 7 104 3.5 5.5 4.5 1.3 145 chrX 4101849 exon CG15375 + chrX 4101922 exon CG15375 + chrX 4101994 exon CG15375 + chrX_7_4100001 chrX_4100001 EF39_1-HE 3263 chrX 4115186 4115235 chrX 4115291 4115340 16 103 3.0 1.0 2.0 5.3 154 chrX 4115186 exon Tip60 - chrX 4115263 intron Tip60 - chrX 4115340 exon Tip60 - chrX_16_4115001 chrX_4115001 EF39_1-HE 3264 chrX 4157866 4157870 chrX 4164931 4164935 297 4 7065 11.0 1.5 6.2 0.6 7069 chrX 4157866 intron Fas2 - chrX 4161400 intron Fas2 - chrX 4164935 intron Fas2 - chrX_4_4160001 chrX_4160001 EF39_1-HE 3265 chrX 4157889 4157921 chrX 4164954 4164983 297 13 7065 2.5 1.5 2.0 4.3 7094 chrX 4157889 intron Fas2 - chrX 4161436 intron Fas2 - chrX 4164983 intron Fas2 - chrX_13_4160001 chrX_4160001 EF39_1-HE 3266 chrX 4170445 4170492 chrX 4170548 4170595 18 103 10.0 11.5 10.8 1.5 150 chrX 4170445 intron Fas2 - chrX 4170520 intron Fas2 - chrX 4170595 intron Fas2 - chrX_18_4170001 chrX_4170001 EF39_1-HE 3267 chrX 4174643 4174702 chrX 4175089 4175148 23 444 4.0 3.5 3.8 4.8 505 chrX 4174643 intron Fas2 - chrX 4174896 intron Fas2 - chrX 4175148 intron Fas2 - chrX_23_4170001 chrX_4170001 EF39_1-HE 3268 chrX 4245123 4245169 chrX 4245247 4245293 36 124 6.5 11.0 8.8 3.7 170 chrX 4245123 exon Muc4B - chrX 4245208 exon Muc4B - chrX 4245293 exon Muc4B - chrX_36_4245001 chrX_4245001 EF39_1-HE 3269 chrX 4256035 4256081 chrX 4256153 4256199 15 117 3.5 4.0 3.8 3.1 164 chrX 4256035 intergenic not near genes chrX 4256117 intergenic not near genes chrX 4256199 intergenic not near genes chrX_15_4255001 chrX_4255001 EF39_1-HE 3270 chrX 4262739 4262788 chrX 4262864 4262913 27 125 3.5 9.5 6.5 3.6 174 chrX 4262739 intergenic not near genes chrX 4262826 intergenic not near genes chrX 4262913 intergenic not near genes chrX_27_4260001 chrX_4260001 EF39_1-HE 3271 chrX 4293142 4293164 chrX 4293258 4293280 7 116 4.0 4.0 4.0 1.4 138 chrX 4293142 intergenic not near genes chrX 4293211 intergenic not near genes chrX 4293280 intergenic not near genes chrX_7_4290001 chrX_4290001 EF39_1-HE 3272 chrX 4294470 4294516 chrX 4294594 4294640 10 124 3.5 6.5 5.0 1.7 170 chrX 4294470 intergenic not near genes chrX 4294555 intergenic not near genes chrX 4294640 intergenic not near genes chrX_10_4290001 chrX_4290001 EF39_1-HE 3273 chrX 4295944 4295996 chrX 4296057 4296109 8 112 2.0 5.5 3.8 1.7 165 chrX 4295944 intergenic not near genes chrX 4296026 intergenic not near genes chrX 4296109 intergenic not near genes chrX_8_4295001 chrX_4295001 EF39_1-HE 3274 chrX 4324365 4324410 chrX 4324468 4324513 6 103 3.5 4.0 3.8 1.2 148 chrX 4324365 intron norpA + chrX 4324439 intron norpA + chrX 4324513 intron norpA + chrX_6_4320001 chrX_4320001 EF39_1-HE 3275 chrX 4361416 4361447 chrX 4361521 4361552 11 105 7.0 5.5 6.2 1.5 136 chrX 4361416 intron norpA + chrX 4361484 intron norpA + chrX 4361552 intron norpA + chrX_11_4360001 chrX_4360001 EF39_1-HE 3276 chrX 4388274 4388284 chrX 4388437 4388448 4 164 3.5 3.5 3.5 0.9 174 chrX 4388274 intron CR32773 - chrX 4388361 intron CR32773 - chrX 4388448 intron CR32773 - chrX_4_4385001 chrX_4385001 EF39_1-HE 3277 chrX 4397800 4397815 chrX 4397902 4397920 9 105 0.0 13.0 6.5 1.2 120 chrX 4397800 intron CR32773 - chrX 4397860 intron CR32773 - chrX 4397920 intron CR32773 - chrX_9_4395001 chrX_4395001 EF39_1-HE 3278 chrX 4399452 4399502 chrX 4399566 4399616 12 113 3.5 6.0 4.8 2.1 164 chrX 4399452 intron CR32773 - chrX 4399534 intron CR32773 - chrX 4399616 intron CR32773 - chrX_12_4395001 chrX_4395001 EF39_1-HE 3279 chrX 4417782 4417794 chrX 4417886 4417898 6 104 0.0 0.0 0.0 6.0 116 chrX 4417782 intron,intron CR32773 -,bi + chrX 4417840 intron,intron CR32773 -,bi + chrX 4417898 intron,intron CR32773 -,bi + chrX_6_4415001 chrX_4415001 EF39_1-HE 3280 chrX 4424777 4424829 chrX 4424909 4424961 14 131 3.0 5.5 4.2 2.7 184 chrX 4424777 intron,intron CR32773 -,bi + chrX 4424869 intron,intron CR32773 -,bi + chrX 4424961 intron,intron CR32773 -,bi + chrX_14_4420001 chrX_4420001 EF39_1-HE 3281 chrX 4429483 4429511 chrX 4429592 4429620 11 108 3.0 1.5 2.2 3.4 137 chrX 4429483 intron,exon CR32773 -,bi + chrX 4429552 intron,intron CR32773 -,bi + chrX 4429620 intron,intron CR32773 -,bi + chrX_11_4425001 chrX_4425001 EF39_1-HE 3282 chrX 4436478 4436496 chrX 4436594 4436610 7 116 0.5 8.5 4.5 1.3 132 chrX 4436478 intron,intron CR32773 -,bi + chrX 4436544 intron,intron CR32773 -,bi + chrX 4436610 intron,intron CR32773 -,bi + chrX_7_4435001 chrX_4435001 EF39_1-HE 3283 chrX 4436782 4436817 chrX 4436885 4436920 8 102 6.5 7.0 6.8 1.0 138 chrX 4436782 intron,intron CR32773 -,bi + chrX 4436851 intron,intron CR32773 -,bi + chrX 4436920 intron,intron CR32773 -,bi + chrX_8_4435001 chrX_4435001 EF39_1-HE 3284 chrX 4468206 4468253 chrX 4468305 4468358 4 104 0.0 8.0 4.0 0.8 152 chrX 4468206 intron,intron CR32773 -,bi + chrX 4468282 intron,intron CR32773 -,bi + chrX 4468358 intron,intron CR32773 -,bi + chrX_4_4465001 chrX_4465001 EF39_1-HE 3285 chrX 4525045 4525051 chrX 4525151 4525157 4 106 13.5 0.0 6.8 0.5 112 chrX 4525045 intron CR32773 - chrX 4525101 intron CR32773 - chrX 4525157 intron CR32773 - chrX_4_4525001 chrX_4525001 EF39_1-HE 3286 chrX 4613525 4613565 chrX 4613641 4613681 13 115 3.5 4.0 3.8 2.7 156 chrX 4613525 intergenic not near genes chrX 4613603 intergenic not near genes chrX 4613681 intergenic not near genes chrX_13_4610001 chrX_4610001 EF39_1-HE 3287 chrX 4660801 4660821 chrX 4660926 4660946 5 125 6.5 0.0 3.2 1.2 145 chrX 4660801 intron CG3009 - chrX 4660874 intron CG3009 - chrX 4660946 intron CG3009 - chrX_5_4660001 chrX_4660001 EF39_1-HE 3288 chrX 4699479 4699507 chrX 4699596 4699624 6 117 5.5 4.0 4.8 1.0 145 chrX 4699479 3` UTR ctp + chrX 4699552 3` UTR ctp + chrX 4699624 3` UTR ctp + chrX_6_4695001 chrX_4695001 EF39_1-HE 3289 chrX 4700369 4700418 chrX 4700738 4700787 jockey 9 369 3.5 2.5 3.0 2.2 418 chrX 4700369 3` UTR ctp + chrX 4700578 3` UTR ctp + chrX 4700787 3` UTR ctp + chrX_9_4700001 chrX_4700001 EF39_1-HE 3290 chrX 4744137 4744170 chrX 4744261 4744294 6 124 0.5 5.0 2.8 1.6 157 chrX 4744137 intergenic not near genes chrX 4744216 intergenic not near genes chrX 4744294 intergenic not near genes chrX_6_4740001 chrX_4740001 EF39_1-HE 3291 chrX 4755380 4755438 chrX 4755483 4755541 11 103 0.0 1.5 0.8 6.1 161 chrX 4755380 intergenic not near genes chrX 4755460 intergenic not near genes chrX 4755541 intergenic not near genes chrX_11_4755001 chrX_4755001 EF39_1-HE 3292 chrX 4763233 4763284 chrX 4763747 4763796 Stalker4 8 512 4.0 2.5 3.2 1.9 563 chrX 4763233 intergenic not near genes chrX 4763514 intergenic not near genes chrX 4763796 intergenic not near genes chrX_8_4760001 chrX_4760001 EF39_1-HE 3293 chrX 4787053 4787073 chrX 4787177 4787197 5 124 3.5 2.0 2.8 1.3 144 chrX 4787053 intergenic not near genes chrX 4787125 intergenic not near genes chrX 4787197 intergenic not near genes chrX_5_4785001 chrX_4785001 EF39_1-HE 3294 chrX 4827948 4827995 chrX 4835345 4835392 Stalker4 20 7394 8.5 7.0 7.8 2.3 7444 chrX 4827948 intergenic not near genes chrX 4831670 intergenic not near genes chrX 4835392 intergenic not near genes chrX_20_4830001 chrX_4830001 EF39_1-HE 3295 chrX 4849460 4849491 chrX 4849576 4849599 19 115 5.5 5.5 5.5 2.9 139 chrX 4849460 intron CG42594 + chrX 4849530 intron CG42594 + chrX 4849599 intron CG42594 + chrX_19_4845001 chrX_4845001 EF39_1-HE 3296 chrX 4965533 4965586 chrX 4965639 4965692 15 106 6.5 5.0 5.8 2.2 159 chrX 4965533 intron CR44833 - chrX 4965612 intron CR44833 - chrX 4965692 intron CR44833 - chrX_15_4965001 chrX_4965001 EF39_1-HE 3297 chrX 4967916 4967937 chrX 4968030 4968050 5 114 0.0 4.0 2.0 1.7 134 chrX 4967916 intron CR44833 - chrX 4967983 intron CR44833 - chrX 4968050 intron CR44833 - chrX_5_4965001 chrX_4965001 EF39_1-HE 3298 chrX 4990028 4990073 chrX 4997268 4997313 roo 12 7239 1.5 9.0 5.2 1.9 7285 chrX 4990028 intron CR44833 - chrX 4993670 intron CR44833 - chrX 4997313 intron CR44833 - chrX_12_4990001 chrX_4990001 EF39_1-HE 3299 chrX 5088498 5088785 chrX 5088739 5088966 25 212 0.0 0.0 0.0 25.0 468 chrX 5088498 intron,intron CG15465 +,rg + chrX 5088732 intron,intron CG15465 +,rg + chrX 5088966 intron,intron CG15465 +,rg + chrX_25_5085001 chrX_5085001 EF39_1-HE 3300 chrX 5096265 5096305 chrX 5103856 5103896 springer 10 7591 0.5 9.0 4.8 1.7 7631 chrX 5096265 intron,intron CG15465 +,rg + chrX 5100080 intron,intron CG15465 +,rg + chrX 5103896 intron,intron CG15465 +,rg + chrX_10_5100001 chrX_5100001 EF39_1-HE 3301 chrX 5126500 5126554 chrX 5126695 5126749 10 195 4.0 5.0 4.5 1.8 249 chrX 5126500 intron,intron CG15465 +,rg + chrX 5126624 intron,intron CG15465 +,rg + chrX 5126749 intron,intron CG15465 +,rg + chrX_10_5125001 chrX_5125001 EF39_1-HE 3302 chrX 5180237 5180247 chrX 5180342 5180352 5 105 9.5 4.5 7.0 0.6 115 chrX 5180237 intron,intron,3` UTR CG15465 +,rg +,CG5062 - chrX 5180294 intron,intron,3` UTR CG15465 +,rg +,CG5062 - chrX 5180352 intron,intron,3` UTR CG15465 +,rg +,CG5062 - chrX_5_5180001 chrX_5180001 EF39_1-HE 3303 chrX 5270230 5270262 chrX 5270349 5270381 8 119 6.5 6.0 6.2 1.1 151 chrX 5270230 intergenic not near genes chrX 5270306 intergenic not near genes chrX 5270381 intergenic not near genes chrX_8_5270001 chrX_5270001 EF39_1-HE 3304 chrX 5338681 5338727 chrX 5339960 5340005 jockey 18 1279 4.5 4.0 4.2 3.5 1324 chrX 5338681 intergenic not near genes chrX 5339343 intergenic not near genes chrX 5340005 intergenic SK + chrX_18_5335001 chrX_5335001 EF39_1-HE 3305 chrX 5347456 5347514 chrX 5347570 5347628 27 114 2.5 2.0 2.2 8.4 172 chrX 5347456 intron SK + chrX 5347542 intron SK + chrX 5347628 intron SK + chrX_27_5345001 chrX_5345001 EF39_1-HE 3306 chrX 5349254 5349306 chrX 5349356 5349409 12 102 3.5 0.0 1.8 4.3 155 chrX 5349254 intron SK + chrX 5349332 intron SK + chrX 5349409 intron SK + chrX_12_5345001 chrX_5345001 EF39_1-HE 3307 chrX 5367394 5367438 chrX 5367497 5367541 18 102 8.5 7.5 8.0 2.0 147 chrX 5367394 intron SK + chrX 5367468 intron SK + chrX 5367541 intron SK + chrX_18_5365001 chrX_5365001 EF39_1-HE 3308 chrX 5400730 5400755 chrX 5400884 5400909 10 153 5.5 5.0 5.2 1.6 179 chrX 5400730 intron SK + chrX 5400820 intron SK + chrX 5400909 intron SK + chrX_10_5400001 chrX_5400001 EF39_1-HE 3309 chrX 5438208 5438257 chrX 5438348 5438396 13 140 2.0 1.5 1.8 4.6 188 chrX 5438208 intergenic not near genes chrX 5438302 intergenic not near genes chrX 5438396 intergenic not near genes chrX_13_5435001 chrX_5435001 EF39_1-HE 3310 chrX 5473561 5473569 chrX 5473663 5473671 6 102 11.0 0.5 5.8 0.9 110 chrX 5473561 intron SPR + chrX 5473616 intron SPR + chrX 5473671 intron SPR + chrX_6_5470001 chrX_5470001 EF39_1-HE 3311 chrX 5512058 5512081 chrX 5512170 5512193 5 111 2.5 4.0 3.2 1.2 135 chrX 5512058 intergenic not near genes chrX 5512126 intergenic not near genes chrX 5512193 intergenic not near genes chrX_5_5510001 chrX_5510001 EF39_1-HE 3312 chrX 5524641 5524691 chrX 5524748 5524780 11 104 3.0 0.5 1.8 3.9 139 chrX 5524641 intergenic snoRNA:Psi28S-3342 - chrX 5524710 intergenic snoRNA:Psi28S-3342 - chrX 5524780 intergenic snoRNA:Psi28S-3342 - chrX_11_5520001 chrX_5520001 EF39_1-HE 3313 chrX 5566785 5566786 chrX 5566888 5566889 4 103 11.0 21.0 16.0 0.2 104 chrX 5566785 intergenic not near genes chrX 5566837 intergenic not near genes chrX 5566889 intergenic not near genes chrX_4_5565001 chrX_5565001 EF39_1-HE 3314 chrX 5648192 5648235 chrX 5648298 5648341 13 106 4.0 4.5 4.2 2.5 149 chrX 5648192 intron CG42492 - chrX 5648266 intron CG42492 - chrX 5648341 intron CG42492 - chrX_13_5645001 chrX_5645001 EF39_1-HE 3315 chrX 5727399 5727411 chrX 5732164 5732176 Doc 4 4765 1.5 1.5 1.5 1.6 4777 chrX 5727399 intron CG32758 - chrX 5729788 intron CG32758 - chrX 5732176 intron CG32758 - chrX_4_5725001 chrX_5725001 EF39_1-HE 3316 chrX 5835369 5835382 chrX 5835482 5835494 4 113 9.0 0.0 4.5 0.7 125 chrX 5835369 intron CG15765 + chrX 5835432 intron CG15765 + chrX 5835494 intron CG15765 + chrX_4_5835001 chrX_5835001 EF39_1-HE 3317 chrX 5856390 5856449 chrX 5856518 5856577 24 130 38.5 39.5 39.0 0.6 187 chrX 5856390 intergenic not near genes chrX 5856484 intergenic not near genes chrX 5856577 intergenic not near genes chrX_24_5855001 chrX_5855001 EF39_1-HE 3318 chrX 5883784 5883839 chrX 5884051 5884106 pogo 15 267 2.5 1.5 2.0 5.0 322 chrX 5883784 intron CR45668 - chrX 5883945 intron CR45668 - chrX 5884106 intron CR45668 - chrX_15_5880001 chrX_5880001 EF39_1-HE 3319 chrX 5884155 5884193 chrX 5884422 5884460 pogo 5 267 0.5 5.0 2.8 1.3 305 chrX 5884155 intron CR45668 - chrX 5884308 intron CR45668 - chrX 5884460 intron CR45668 - chrX_5_5880001 chrX_5880001 EF39_1-HE 3320 chrX 5886445 5886473 chrX 5886557 5886585 7 112 8.0 0.0 4.0 1.4 140 chrX 5886445 intron CR45668 - chrX 5886515 intron CR45668 - chrX 5886585 intron CR45668 - chrX_7_5885001 chrX_5885001 EF39_1-HE 3321 chrX 6135195 6135251 chrX 6135304 6135360 42 109 9.5 14.5 12.0 3.2 165 chrX 6135195 intron Ca-alpha1T - chrX 6135278 intron Ca-alpha1T - chrX 6135360 intron Ca-alpha1T - chrX_42_6135001 chrX_6135001 EF39_1-HE 3322 chrX 6169111 6169146 chrX 6169215 6169250 16 104 7.5 5.0 6.2 2.2 139 chrX 6169111 intron Ca-alpha1T - chrX 6169180 intron Ca-alpha1T - chrX 6169250 intron Ca-alpha1T - chrX_16_6165001 chrX_6165001 EF39_1-HE 3323 chrX 6171563 6171609 chrX 6179022 6179068 Quasimodo 14 7457 9.5 8.5 9.0 1.4 7505 chrX 6171563 intron Ca-alpha1T - chrX 6175316 intron Ca-alpha1T - chrX 6179068 intron Ca-alpha1T - chrX_14_6175001 chrX_6175001 EF39_1-HE 3324 chrX 6209939 6209953 chrX 6210032 6210056 4 100 3.0 2.5 2.8 1.1 117 chrX 6209939 intergenic not near genes chrX 6209998 intergenic not near genes chrX 6210056 intergenic not near genes chrX_4_6205001 chrX_6205001 EF39_1-HE 3325 chrX 6213695 6213718 chrX 6213800 6213826 5 106 1.5 4.0 2.8 1.3 131 chrX 6213695 intergenic not near genes chrX 6213760 intergenic not near genes chrX 6213826 intergenic not near genes chrX_5_6210001 chrX_6210001 EF39_1-HE 3326 chrX 6215503 6215531 chrX 6215609 6215638 10 107 7.5 5.5 6.5 1.3 135 chrX 6215503 intergenic not near genes chrX 6215570 intergenic not near genes chrX 6215638 intergenic not near genes chrX_10_6215001 chrX_6215001 EF39_1-HE 3327 chrX 6232710 6232740 chrX 6232860 6232890 16 150 5.5 11.0 8.2 1.7 180 chrX 6232710 3` UTR CG14446 + chrX 6232800 3` UTR CG14446 + chrX 6232890 3` UTR CG14446 + chrX_16_6230001 chrX_6230001 EF39_1-HE 3328 chrX 6315554 6315605 chrX 6315688 6315739 13 134 8.0 1.0 4.5 2.4 185 chrX 6315554 intron CG15894 + chrX 6315646 intron CG15894 + chrX 6315739 intron CG15894 + chrX_13_6315001 chrX_6315001 EF39_1-HE 3329 chrX 6322122 6322153 chrX 6322324 6322355 19 201 11.0 8.0 9.5 1.8 233 chrX 6322122 intron CG15894 + chrX 6322238 intron CG15894 + chrX 6322355 intron CG15894 + chrX_19_6320001 chrX_6320001 EF39_1-HE 3330 chrX 6335181 6335242 chrX 6337719 6337778 Tirant 12 2536 2.5 3.5 3.0 3.0 2597 chrX 6335181 intergenic not near genes chrX 6336480 intergenic not near genes chrX 6337778 5` UTR CG3842 + chrX_12_6335001 chrX_6335001 EF39_1-HE 3331 chrX 6392857 6392881 chrX 6397648 6397668 Doc 6 4790 2.5 4.0 3.2 1.4 4811 chrX 6392857 intergenic not near genes chrX 6395262 intergenic not near genes chrX 6397668 intergenic not near genes chrX_6_6395001 chrX_6395001 EF39_1-HE 3332 chrX 6429977 6429993 chrX 6435478 6435485 Rt1c 11 5500 11.5 14.0 12.8 0.8 5508 chrX 6429977 intron CG42340 - chrX 6432731 intron CG42340 - chrX 6435485 intron CG42340 - chrX_11_6430001 chrX_6430001 EF39_1-HE 3333 chrX 6509885 6509945 chrX 6509990 6510050 35 104 6.5 8.0 7.2 4.3 165 chrX 6509885 intron CG42340 - chrX 6509968 intron CG42340 - chrX 6510050 intron CG42340 - chrX_35_6505001 chrX_6505001 EF39_1-HE 3334 chrX 6520747 6520779 chrX 6520837 6520881 12 97 1.5 5.5 3.5 2.7 134 chrX 6520747 intron CG42340 - chrX 6520814 intron CG42340 - chrX 6520881 intron CG42340 - chrX_12_6520001 chrX_6520001 EF39_1-HE 3335 chrX 6545167 6545176 chrX 6545281 6545286 5 113 0.0 13.0 6.5 0.7 119 chrX 6545167 intron CG34417 + chrX 6545226 intron CG34417 + chrX 6545286 intron CG34417 + chrX_5_6545001 chrX_6545001 EF39_1-HE 3336 chrX 6562799 6562848 chrX 6571307 6571356 Tirant 17 8507 3.5 5.5 4.5 3.1 8557 chrX 6562799 intron CG34417 + chrX 6567078 intron CG34417 + chrX 6571356 intron CG34417 + chrX_17_6565001 chrX_6565001 EF39_1-HE 3337 chrX 6574116 6574167 chrX 6574224 6574275 19 107 7.5 4.0 5.8 2.8 159 chrX 6574116 intron CG34417 + chrX 6574196 intron CG34417 + chrX 6574275 intron CG34417 + chrX_19_6570001 chrX_6570001 EF39_1-HE 3338 chrX 6601966 6601989 chrX 6602070 6602093 7 104 5.0 4.5 4.8 1.2 127 chrX 6601966 intron pigs + chrX 6602030 intron pigs + chrX 6602093 intron pigs + chrX_7_6600001 chrX_6600001 EF39_1-HE 3339 chrX 6601998 6602021 chrX 6602067 6602125 9 100 4.0 4.5 4.2 1.7 127 chrX 6601998 intron pigs + chrX 6602062 intron pigs + chrX 6602125 intron pigs + chrX_9_6600001 chrX_6600001 EF39_1-HE 3340 chrX 6733431 6733672 chrX 6733534 6733775 17 103 8.0 8.0 8.0 1.9 344 chrX 6733431 intron,intron CG3168 -,CR43461 + chrX 6733603 intron,intron CG3168 -,CR43461 + chrX 6733775 intron,intron CG3168 -,CR43461 + chrX_17_6730001 chrX_6730001 EF39_1-HE 3341 chrX 6734624 6734655 chrX 6734730 6734760 15 105 4.0 8.5 6.2 2.1 136 chrX 6734624 intron,intron CG3168 -,CR43461 + chrX 6734692 intron,intron CG3168 -,CR43461 + chrX 6734760 intron,intron CG3168 -,CR43461 + chrX_15_6730001 chrX_6730001 EF39_1-HE 3342 chrX 6778930 6778986 chrX 6779042 6779097 11 112 6.0 0.0 3.0 2.8 167 chrX 6778930 intron shf - chrX 6779014 intron shf - chrX 6779097 intron shf - chrX_11_6775001 chrX_6775001 EF39_1-HE 3343 chrX 6779756 6779806 chrX 6779865 6779915 8 109 3.5 9.0 6.2 1.1 159 chrX 6779756 intergenic shf - chrX 6779836 intergenic shf - chrX 6779915 intergenic shf - chrX_8_6775001 chrX_6775001 EF39_1-HE 3344 chrX 6794981 6795028 chrX 6795093 6795127 28 111 7.0 8.5 7.8 3.2 146 chrX 6794981 intron C3G - chrX 6795054 intron C3G - chrX 6795127 intron C3G - chrX_28_6795001 chrX_6795001 EF39_1-HE 3345 chrX 6814233 6814266 chrX 6814357 6814390 6 122 2.0 1.5 1.8 2.1 157 chrX 6814233 exon iav + chrX 6814312 intron iav + chrX 6814390 intron iav + chrX_6_6810001 chrX_6810001 EF39_1-HE 3346 chrX 6865765 6865794 chrX 6865872 6865901 16 107 16.5 17.0 16.8 0.9 136 chrX 6865765 intron CG14434 - chrX 6865833 intron CG14434 - chrX 6865901 intron CG14434 - chrX_16_6865001 chrX_6865001 EF39_1-HE 3347 chrX 6897667 6897701 chrX 6897803 6897837 8 135 1.0 4.0 2.5 2.3 170 chrX 6897667 intergenic not near genes chrX 6897752 intergenic not near genes chrX 6897837 intergenic not near genes chrX_8_6895001 chrX_6895001 EF39_1-HE 3348 chrX 6906075 6906106 chrX 6906177 6906209 9 103 3.5 7.0 5.2 1.5 134 chrX 6906075 intergenic not near genes chrX 6906142 intergenic not near genes chrX 6906209 intergenic not near genes chrX_9_6905001 chrX_6905001 EF39_1-HE 3349 chrX 6924422 6924465 chrX 6924532 6924575 9 110 5.0 2.5 3.8 1.9 153 chrX 6924422 intron CG14431 + chrX 6924498 intron CG14431 + chrX 6924575 intron CG14431 + chrX_9_6920001 chrX_6920001 EF39_1-HE 3350 chrX 6989481 6989530 chrX 6989594 6989643 10 113 5.5 4.0 4.8 1.7 162 chrX 6989481 intron ogre - chrX 6989562 intron ogre - chrX 6989643 intron ogre - chrX_10_6985001 chrX_6985001 EF39_1-HE 3351 chrX 7023577 7023628 chrX 7030993 7031044 Tabor 9 7415 3.5 2.5 3.0 2.2 7467 chrX 7023577 intron CG12541 - chrX 7027310 intron CG12541 - chrX 7031044 intron CG12541 - chrX_9_7025001 chrX_7025001 EF39_1-HE 3352 chrX 7065279 7065319 chrX 7065385 7065425 13 106 2.0 1.5 1.8 4.6 146 chrX 7065279 intron CG12541 - chrX 7065352 intron CG12541 - chrX 7065425 intron CG12541 - chrX_13_7065001 chrX_7065001 EF39_1-HE 3353 chrX 7148952 7148980 chrX 7149070 7149098 13 118 4.5 1.0 2.8 3.4 146 chrX 7148952 intron,intron CG9650 +,CR32730 - chrX 7149025 intron,intron CG9650 +,CR32730 - chrX 7149098 intron,intron CG9650 +,CR32730 - chrX_13_7145001 chrX_7145001 EF39_1-HE 3354 chrX 7217923 7217972 chrX 7218040 7218089 20 117 2.5 5.5 4.0 4.0 166 chrX 7217923 intron,intron CG9650 +,CR44357 - chrX 7218006 intron,intron CG9650 +,CR44357 - chrX 7218089 intron,intron CG9650 +,CR44357 - chrX_20_7215001 chrX_7215001 EF39_1-HE 3355 chrX 7297651 7297668 chrX 7297760 7297778 4 109 0.5 0.0 0.2 3.3 127 chrX 7297651 intron,intron CR44357 -,CG1677 - chrX 7297714 intron,intron CR44357 -,CG1677 - chrX 7297778 intron,intron CR44357 -,CG1677 - chrX_4_7295001 chrX_7295001 EF39_1-HE 3356 chrX 7298181 7298207 chrX 7298302 7298328 5 119 3.5 3.5 3.5 1.1 147 chrX 7298181 intron,intron CR44357 -,CG1677 - chrX 7298254 intron,intron CR44357 -,CG1677 - chrX 7298328 intron,intron CR44357 -,CG1677 - chrX_5_7295001 chrX_7295001 EF39_1-HE 3357 chrX 7310543 7310563 chrX 7310646 7310665 9 103 11.0 12.5 11.8 0.7 122 chrX 7310543 intron,intron,exon CR44357 -,CG1677 -,brk + chrX 7310604 intron,intron,3` UTR CR44357 -,CG1677 -,brk + chrX 7310665 intron,intron,3` UTR CR44357 -,CG1677 -,brk + chrX_9_7310001 chrX_7310001 EF39_1-HE 3358 chrX 7391075 7391078 chrX 7391179 7391182 4 104 2.5 10.0 6.2 0.6 107 chrX 7391075 intron,intron CR44357 -,CG1677 - chrX 7391128 intron,intron CR44357 -,CG1677 - chrX 7391182 intron,intron CR44357 -,CG1677 - chrX_4_7390001 chrX_7390001 EF39_1-HE 3359 chrX 7570611 7570664 chrX 7570771 7570824 20 160 7.0 8.5 7.8 2.3 213 chrX 7570611 intergenic not near genes chrX 7570718 intergenic not near genes chrX 7570824 intergenic not near genes chrX_20_7570001 chrX_7570001 EF39_1-HE 3360 chrX 7681724 7681737 chrX 7681834 7681847 5 110 3.0 0.0 1.5 2.0 123 chrX 7681724 intergenic CR45665 - chrX 7681786 intergenic not near genes chrX 7681847 intergenic CHES-1-like - chrX_5_7680001 chrX_7680001 EF39_1-HE 3361 chrX 7702897 7702926 chrX 7703361 7703389 jockey 17 465 11.5 0.0 5.8 2.5 492 chrX 7702897 intron CHES-1-like - chrX 7703143 intron CHES-1-like - chrX 7703389 intron CHES-1-like - chrX_17_7700001 chrX_7700001 EF39_1-HE 3362 chrX 7703627 7703682 chrX 7703741 7703783 15 112 5.0 0.0 2.5 4.3 156 chrX 7703627 intron CHES-1-like - chrX 7703705 intron CHES-1-like - chrX 7703783 intron CHES-1-like - chrX_15_7700001 chrX_7700001 EF39_1-HE 3363 chrX 7733797 7733849 chrX 7733914 7733966 15 116 2.5 4.5 3.5 3.3 169 chrX 7733797 intron Pdp - chrX 7733882 intron Pdp - chrX 7733966 intron Pdp - chrX_15_7730001 chrX_7730001 EF39_1-HE 3364 chrX 7747120 7747132 chrX 7747222 7747234 5 102 10.0 5.0 7.5 0.6 114 chrX 7747120 intergenic not near genes chrX 7747177 intergenic not near genes chrX 7747234 intergenic not near genes chrX_5_7745001 chrX_7745001 EF39_1-HE 3365 chrX 7747136 7747174 chrX 7747219 7747275 17 97 5.5 5.5 5.5 2.6 139 chrX 7747136 intergenic not near genes chrX 7747206 intergenic not near genes chrX 7747275 intergenic not near genes chrX_17_7745001 chrX_7745001 EF39_1-HE 3366 chrX 7784141 7784174 chrX 7784263 7784545 jockey 8 215 8.5 0.0 4.2 1.5 404 chrX 7784141 intergenic not near genes chrX 7784343 intergenic not near genes chrX 7784545 intergenic not near genes chrX_8_7780001 chrX_7780001 EF39_1-HE 3367 chrX 7834383 7834385 chrX 20271022 20271024 4 12436639 14.5 4.5 9.5 0.4 12436641 chrX 7834383 intron CG1402 + chrX 14052704 intergenic Ste:CG33240 -,Ste:CG33237 -,Ste:CG33239 -,Ste:CG33241 -,Ste:CG33242 -,Ste:CG33244 -,Ste:CG33245 - chrX 20271024 intergenic not near genes chrX_4_14050001 chrX_14050001 EF39_1-HE 3368 chrX 7845699 7845754 chrX 7847216 7847271 hopper2 16 1516 7.0 6.5 6.8 2.1 1572 chrX 7845699 intergenic not near genes chrX 7846485 intergenic not near genes chrX 7847271 intergenic not near genes chrX_16_7845001 chrX_7845001 EF39_1-HE 3369 chrX 7881826 7881879 chrX 7881936 7881987 6 109 0.5 1.5 1.0 3.0 161 chrX 7881826 intergenic Ir7f -,Ir7e - chrX 7881906 intergenic Ir7f -,Ir7e - chrX 7881987 3` UTR Ir7f - chrX_6_7880001 chrX_7880001 EF39_1-HE 3370 chrX 7931586 7931605 chrX 7931696 7931715 4 110 1.0 3.5 2.2 1.2 129 chrX 7931586 intergenic CG10778 -,CG10777 - chrX 7931650 intergenic CG10778 -,CG10777 - chrX 7931715 intergenic CG10778 -,CG10777 - chrX_4_7930001 chrX_7930001 EF39_1-HE 3371 chrX 7993142 7993149 chrX 7993357 7993365 6 215 31.0 37.0 34.0 0.2 223 chrX 7993142 intergenic not near genes chrX 7993254 intergenic not near genes chrX 7993365 intergenic not near genes chrX_6_7990001 chrX_7990001 EF39_1-HE 3372 chrX 7993138 7993192 chrX 7993366 7993407 11 217 33.5 36.5 35.0 0.3 269 chrX 7993138 intergenic not near genes chrX 7993272 intergenic not near genes chrX 7993407 intergenic not near genes chrX_11_7990001 chrX_7990001 EF39_1-HE 3373 chrX 8012049 8012096 chrX 8012156 8012203 10 107 5.5 4.0 4.8 1.7 154 chrX 8012049 intron Tbh + chrX 8012126 intron Tbh + chrX 8012203 intron Tbh + chrX_10_8010001 chrX_8010001 EF39_1-HE 3374 chrX 8024629 8024661 chrX 8024731 8024763 9 101 12.0 6.0 9.0 0.9 134 chrX 8024629 intron Tbh + chrX 8024696 intron Tbh + chrX 8024763 intron Tbh + chrX_9_8020001 chrX_8020001 EF39_1-HE 3375 chrX 8031402 8031449 chrX 8035737 8035784 Juan 15 4335 6.5 7.0 6.8 1.9 4382 chrX 8031402 intergenic not near genes chrX 8033593 intergenic not near genes chrX 8035784 3` UTR CG2233 - chrX_15_8030001 chrX_8030001 EF39_1-HE 3376 chrX 8085547 8085580 chrX 8085659 8085687 10 109 2.5 4.0 3.2 2.4 140 chrX 8085547 intron,5` UTR CG2256 -,CR45535 + chrX 8085617 intron,5` UTR CG2256 -,CR45535 + chrX 8085687 intron,5` UTR CG2256 -,CR45535 + chrX_10_8085001 chrX_8085001 EF39_1-HE 3377 chrX 8215847 8215879 chrX 8215963 8215995 11 116 6.5 5.0 5.8 1.6 148 chrX 8215847 intron sdt + chrX 8215921 intron sdt + chrX 8215995 intron sdt + chrX_11_8215001 chrX_8215001 EF39_1-HE 3378 chrX 8231530 8231565 chrX 8231643 8231678 10 113 5.0 5.5 5.2 1.6 148 chrX 8231530 intron sdt + chrX 8231604 intron sdt + chrX 8231678 intron sdt + chrX_10_8230001 chrX_8230001 EF39_1-HE 3379 chrX 8288095 8288114 chrX 8288203 8288222 6 108 0.5 2.0 1.2 2.7 127 chrX 8288095 intron nAChRalpha3 - chrX 8288158 intron nAChRalpha3 - chrX 8288222 intron nAChRalpha3 - chrX_6_8285001 chrX_8285001 EF39_1-HE 3380 chrX 8358655 8358695 chrX 8359124 8359165 8 470 4.5 4.5 4.5 1.5 510 chrX 8358655 intron nAChRalpha3 - chrX 8358910 intron nAChRalpha3 - chrX 8359165 intron nAChRalpha3 - chrX_8_8355001 chrX_8355001 EF39_1-HE 3381 chrX 8363337 8363387 chrX 8363459 8363509 18 121 5.5 4.0 4.8 3.1 172 chrX 8363337 intron nAChRalpha3 - chrX 8363423 intron nAChRalpha3 - chrX 8363509 intron nAChRalpha3 - chrX_18_8360001 chrX_8360001 EF39_1-HE 3382 chrX 8364809 8364866 chrX 8365239 8365296 BS 7 430 1.0 6.5 3.8 1.5 487 chrX 8364809 intron nAChRalpha3 - chrX 8365052 intron nAChRalpha3 - chrX 8365296 intron nAChRalpha3 - chrX_7_8365001 chrX_8365001 EF39_1-HE 3383 chrX 8417224 8417255 chrX 8417339 8417370 6 115 5.0 7.0 6.0 0.9 146 chrX 8417224 intron Trf2 + chrX 8417297 intron Trf2 + chrX 8417370 intron Trf2 + chrX_6_8415001 chrX_8415001 EF39_1-HE 3384 chrX 8424350 8424399 chrX 8424468 8424517 14 118 6.0 4.0 5.0 2.3 167 chrX 8424350 intron Trf2 + chrX 8424434 exon Trf2 + chrX 8424517 exon Trf2 + chrX_14_8420001 chrX_8420001 EF39_1-HE 3385 chrX 8433926 8433976 chrX 8434051 8434093 4 123 7.5 0.0 3.8 0.8 167 chrX 8433926 3` UTR CG12125 - chrX 8434010 3` UTR CG12125 - chrX 8434093 3` UTR CG12125 - chrX_4_8430001 chrX_8430001 EF39_1-HE 3386 chrX 8450992 8451007 chrX 8451095 8451110 6 103 5.0 15.0 10.0 0.5 118 chrX 8450992 intron org-1 - chrX 8451051 intron org-1 - chrX 8451110 exon org-1 - chrX_6_8450001 chrX_8450001 EF39_1-HE 3387 chrX 8466967 8467004 chrX 8467316 8467358 8 353 2.5 3.0 2.8 2.1 391 chrX 8466967 intron CG33223 - chrX 8467162 intron CG33223 - chrX 8467358 intron CG33223 - chrX_8_8465001 chrX_8465001 EF39_1-HE 3388 chrX 8536739 8536776 chrX 8536841 8536878 25 101 13.0 12.0 12.5 1.9 139 chrX 8536739 intron Nrg + chrX 8536808 intron Nrg + chrX 8536878 intron Nrg + chrX_25_8535001 chrX_8535001 EF39_1-HE 3389 chrX 8635888 8635909 chrX 8636044 8636065 6 156 5.0 5.0 5.0 1.0 177 chrX 8635888 intron oc - chrX 8635976 intron oc - chrX 8636065 intron oc - chrX_6_8635001 chrX_8635001 EF39_1-HE 3390 chrX 8639934 8639962 chrX 8640036 8640064 6 102 7.5 4.0 5.8 0.9 130 chrX 8639934 intron oc - chrX 8639999 intron oc - chrX 8640064 intron oc - chrX_6_8635001 chrX_8635001 EF39_1-HE 3391 chrX 8654250 8654257 chrX 8654354 8654361 5 104 0.0 0.0 0.0 5.0 111 chrX 8654250 intergenic not near genes chrX 8654306 intergenic not near genes chrX 8654361 intergenic not near genes chrX_5_8650001 chrX_8650001 EF39_1-HE 3392 chrX 8708691 8708773 chrX 8708848 8708955 15 160 25.5 20.5 23.0 0.6 264 chrX 8708691 intergenic not near genes chrX 8708823 intergenic not near genes chrX 8708955 intergenic not near genes chrX_15_8705001 chrX_8705001 EF39_1-HE 3393 chrX 8727508 8727558 chrX 8727663 8727712 4 155 1.5 0.5 1.0 2.0 204 chrX 8727508 intergenic not near genes chrX 8727610 intergenic not near genes chrX 8727712 intergenic not near genes chrX_4_8725001 chrX_8725001 EF39_1-HE 3394 chrX 8834440 8834466 chrX 8834547 8834558 6 106 2.0 1.5 1.8 2.1 118 chrX 8834440 intergenic not near genes chrX 8834499 intergenic not near genes chrX 8834558 intergenic not near genes chrX_6_8830001 chrX_8830001 EF39_1-HE 3395 chrX 8849335 8849367 chrX 8849443 8849444 4 100 5.0 6.0 5.5 0.6 109 chrX 8849335 intron CG12075 + chrX 8849390 intron CG12075 + chrX 8849444 intron CG12075 + chrX_4_8845001 chrX_8845001 EF39_1-HE 3396 chrX 8860774 8860801 chrX 8860884 8860911 9 110 0.0 5.5 2.8 2.4 137 chrX 8860774 intron CG12075 + chrX 8860842 intron CG12075 + chrX 8860911 intron CG12075 + chrX_9_8860001 chrX_8860001 EF39_1-HE 3397 chrX 8881712 8881768 chrX 8881819 8881877 6 108 0.0 4.0 2.0 2.0 165 chrX 8881712 intron Moe - chrX 8881794 intron Moe - chrX 8881877 intron Moe - chrX_6_8880001 chrX_8880001 EF39_1-HE 3398 chrX 8896671 8896719 chrX 8896786 8896821 12 114 4.0 2.0 3.0 3.0 150 chrX 8896671 intron Moe - chrX 8896746 intron Moe - chrX 8896821 intron Moe - chrX_12_8895001 chrX_8895001 EF39_1-HE 3399 chrX 8922305 8922358 chrX 8922765 8922818 jockey 16 460 7.5 5.5 6.5 2.1 513 chrX 8922305 intron rdgA + chrX 8922562 intron rdgA + chrX 8922818 intron rdgA + chrX_16_8920001 chrX_8920001 EF39_1-HE 3400 chrX 8927561 8927611 chrX 8929857 8929907 NOF 12 2296 3.0 2.5 2.8 3.2 2346 chrX 8927561 intron rdgA + chrX 8928734 intron rdgA + chrX 8929907 intron rdgA + chrX_12_8925001 chrX_8925001 EF39_1-HE 3401 chrX 8948739 8948787 chrX 8956275 8956323 roo 11 7535 0.0 3.5 1.8 3.9 7584 chrX 8948739 intron rdgA + chrX 8952531 intron rdgA + chrX 8956323 intron rdgA + chrX_11_8950001 chrX_8950001 EF39_1-HE 3402 chrX 8973352 8973397 chrX 8973454 8973499 6 102 5.0 10.5 7.8 0.7 147 chrX 8973352 intron,exon,3` UTR rdgA +,CG10962 -,CR43836 - chrX 8973426 intron,intron,intron rdgA +,CG10962 -,CR43836 - chrX 8973499 intron,intron,intron rdgA +,CG10962 -,CR43836 - chrX_6_8970001 chrX_8970001 EF39_1-HE 3403 chrX 8979969 8979977 chrX 8980076 8980084 6 107 3.5 0.0 1.8 2.1 115 chrX 8979969 intron,intron rdgA +,CR43836 - chrX 8980026 intron,intron rdgA +,CR43836 - chrX 8980084 intron,intron rdgA +,CR43836 - chrX_6_8980001 chrX_8980001 EF39_1-HE 3404 chrX 9220196 9220251 chrX 9220306 9220361 13 110 2.5 5.5 4.0 2.6 165 chrX 9220196 intron t - chrX 9220278 intron t - chrX 9220361 intron t - chrX_13_9220001 chrX_9220001 EF39_1-HE 3405 chrX 9336638 9336672 chrX 9336758 9336791 13 120 5.5 8.5 7.0 1.6 153 chrX 9336638 intron CG34449 - chrX 9336714 intron CG34449 - chrX 9336791 intron CG34449 - chrX_13_9335001 chrX_9335001 EF39_1-HE 3406 chrX 9340091 9340115 chrX 9340194 9340218 10 102 7.0 12.0 9.5 1.0 127 chrX 9340091 intron CG34449 - chrX 9340154 intron CG34449 - chrX 9340218 intron CG34449 - chrX_10_9340001 chrX_9340001 EF39_1-HE 3407 chrX 9387742 9387776 chrX 9387854 9387888 5 112 2.0 3.0 2.5 1.4 146 chrX 9387742 intron mgl - chrX 9387815 intron mgl - chrX 9387888 intron mgl - chrX_5_9385001 chrX_9385001 EF39_1-HE 3408 chrX 9403836 9403891 chrX 9403942 9403997 19 106 7.0 6.0 6.5 2.5 161 chrX 9403836 intron mgl - chrX 9403916 intron mgl - chrX 9403997 intron mgl - chrX_19_9400001 chrX_9400001 EF39_1-HE 3409 chrX 9443108 9443157 chrX 9443219 9443267 11 111 3.5 4.5 4.0 2.2 159 chrX 9443108 intron mgl - chrX 9443188 intron mgl - chrX 9443267 intron mgl - chrX_11_9440001 chrX_9440001 EF39_1-HE 3410 chrX 9464458 9464497 chrX 9464558 9464599 7 101 3.0 0.0 1.5 2.8 141 chrX 9464458 intron mgl - chrX 9464528 intron mgl - chrX 9464599 intron mgl - chrX_7_9460001 chrX_9460001 EF39_1-HE 3411 chrX 9508146 9508166 chrX 9509690 9509699 jockey 9 1543 2.0 6.5 4.2 1.7 1553 chrX 9508146 intron CG32700 - chrX 9508922 intron CG32700 - chrX 9509699 intron CG32700 - chrX_9_9505001 chrX_9505001 EF39_1-HE 3412 chrX 9511106 9511163 chrX 9511230 9511287 7 124 2.5 1.0 1.8 2.5 181 chrX 9511106 intron CG32700 - chrX 9511196 intron CG32700 - chrX 9511287 intron CG32700 - chrX_7_9510001 chrX_9510001 EF39_1-HE 3413 chrX 9512252 9512292 chrX 9512380 9512421 11 129 4.0 3.5 3.8 2.3 169 chrX 9512252 intron CG32700 - chrX 9512336 intron CG32700 - chrX 9512421 intron CG32700 - chrX_11_9510001 chrX_9510001 EF39_1-HE 3414 chrX 9537202 9537231 chrX 9537303 9537333 8 102 2.5 6.0 4.2 1.5 131 chrX 9537202 intron CG32700 - chrX 9537268 intron CG32700 - chrX 9537333 intron CG32700 - chrX_8_9535001 chrX_9535001 EF39_1-HE 3415 chrX 9540421 9540460 chrX 9540524 9540564 16 104 4.5 5.5 5.0 2.7 143 chrX 9540421 intron CG32700 - chrX 9540492 intron CG32700 - chrX 9540564 intron CG32700 - chrX_16_9540001 chrX_9540001 EF39_1-HE 3416 chrX 9575769 9575790 chrX 9576119 9576139 mdg3 7 350 7.0 0.5 3.8 1.5 370 chrX 9575769 intron,exon CG32699 -,CG42395 - chrX 9575954 intron,intron CG32699 -,CG42395 - chrX 9576139 intron,5` UTR CG32699 -,CG42395 - chrX_7_9575001 chrX_9575001 EF39_1-HE 3417 chrX 9575791 9575821 chrX 9576115 9576171 mdg3 10 340 3.5 0.5 2.0 3.3 380 chrX 9575791 intron,exon CG32699 -,CG42395 - chrX 9575981 intron,intron CG32699 -,CG42395 - chrX 9576171 intron,5` UTR CG32699 -,CG42395 - chrX_10_9575001 chrX_9575001 EF39_1-HE 3418 chrX 9596396 9596422 chrX 9596506 9596532 12 110 2.0 3.5 2.8 3.2 136 chrX 9596396 intergenic not near genes chrX 9596464 intergenic not near genes chrX 9596532 intergenic not near genes chrX_12_9595001 chrX_9595001 EF39_1-HE 3419 chrX 9632016 9632044 chrX 9632212 9632240 4 196 3.0 0.0 1.5 1.6 224 chrX 9632016 intron l(1)G0232 - chrX 9632128 intron l(1)G0232 - chrX 9632240 intron l(1)G0232 - chrX_4_9630001 chrX_9630001 EF39_1-HE 3420 chrX 9691943 9691958 chrX 9692047 9692062 10 104 5.0 4.0 4.5 1.8 119 chrX 9691943 3` UTR CR44016 - chrX 9692002 3` UTR CR44016 - chrX 9692062 3` UTR CR44016 - chrX_10_9690001 chrX_9690001 EF39_1-HE 3421 chrX 9758003 9758032 chrX 9758156 9758185 10 153 4.5 0.0 2.2 3.1 182 chrX 9758003 intergenic not near genes chrX 9758094 intergenic not near genes chrX 9758185 intergenic not near genes chrX_10_9755001 chrX_9755001 EF39_1-HE 3422 chrX 9763095 9763106 chrX 9763198 9763209 6 103 1.0 0.0 0.5 4.0 114 chrX 9763095 intergenic not near genes chrX 9763152 intergenic not near genes chrX 9763209 intergenic not near genes chrX_6_9760001 chrX_9760001 EF39_1-HE 3423 chrX 9834964 9834968 chrX 9835065 9835091 4 118 5.0 11.5 8.2 0.4 127 chrX 9834964 intron CG32698 + chrX 9835028 intron CG32698 + chrX 9835091 intron CG32698 + chrX_4_9835001 chrX_9835001 EF39_1-HE 3424 chrX 9839324 9839367 chrX 9839433 9839475 4 108 0.0 4.5 2.2 1.2 151 chrX 9839324 intron CG32698 + chrX 9839400 intron CG32698 + chrX 9839475 intron CG32698 + chrX_4_9835001 chrX_9835001 EF39_1-HE 3425 chrX 9848790 9848800 chrX 9848900 9848910 5 110 2.0 6.5 4.2 1.0 120 chrX 9848790 intron CG32698 + chrX 9848850 intron CG32698 + chrX 9848910 exon CG32698 + chrX_5_9845001 chrX_9845001 EF39_1-HE 3426 chrX 9854435 9854484 chrX 9854542 9854591 9 107 2.0 1.5 1.8 3.2 156 chrX 9854435 intergenic not near genes chrX 9854513 intergenic not near genes chrX 9854591 intergenic not near genes chrX_9_9850001 chrX_9850001 EF39_1-HE 3427 chrX 9860627 9860679 chrX 9860735 9860787 8 108 3.5 7.0 5.2 1.3 160 chrX 9860627 intergenic not near genes chrX 9860707 intergenic not near genes chrX 9860787 intergenic not near genes chrX_8_9860001 chrX_9860001 EF39_1-HE 3428 chrX 9899870 9899888 chrX 9900023 9900041 6 153 5.5 3.0 4.2 1.2 171 chrX 9899870 intergenic CG15249 - chrX 9899956 intergenic CG15249 - chrX 9900041 intergenic CG15249 - chrX_6_9895001 chrX_9895001 EF39_1-HE 3429 chrX 9925510 9925560 chrX 9925618 9925668 18 108 5.5 3.5 4.5 3.3 158 chrX 9925510 intergenic not near genes chrX 9925589 intergenic not near genes chrX 9925668 intergenic not near genes chrX_18_9925001 chrX_9925001 EF39_1-HE 3430 chrX 9932854 9932908 chrX 9932956 9933010 27 102 7.0 5.0 6.0 3.9 156 chrX 9932854 intergenic not near genes chrX 9932932 intergenic not near genes chrX 9933010 intergenic not near genes chrX_27_9930001 chrX_9930001 EF39_1-HE 3431 chrX 9940129 9940154 chrX 9940231 9940255 7 102 3.0 0.5 1.8 2.5 126 chrX 9940129 intergenic not near genes chrX 9940192 intergenic not near genes chrX 9940255 intergenic not near genes chrX_7_9940001 chrX_9940001 EF39_1-HE 3432 chrX 9985621 9985659 chrX 9985717 9985764 11 104 0.0 0.0 0.0 11.0 143 chrX 9985621 intergenic not near genes chrX 9985692 intergenic not near genes chrX 9985764 intergenic not near genes chrX_11_9985001 chrX_9985001 EF39_1-HE 3433 chrX 10128041 10128089 chrX 10128172 10128220 19 131 3.5 7.0 5.2 3.1 179 chrX 10128041 intron,intron RhoU +,CR44894 - chrX 10128130 intron,intron RhoU +,CR44894 - chrX 10128220 intron,intron RhoU +,CR44894 - chrX_19_10125001 chrX_10125001 EF39_1-HE 3434 chrX 10130758 10130809 chrX 10130861 10130915 16 105 2.5 4.5 3.5 3.6 157 chrX 10130758 intron,intron RhoU +,CR44894 - chrX 10130836 intron,intron RhoU +,CR44894 - chrX 10130915 intron,intron RhoU +,CR44894 - chrX_16_10130001 chrX_10130001 EF39_1-HE 3435 chrX 10138195 10138233 chrX 10145725 10145763 412 17 7530 4.5 6.5 5.5 2.6 7568 chrX 10138195 intron,intron RhoU +,CR44894 - chrX 10141979 intron,intron RhoU +,CR44894 - chrX 10145763 intron,intron RhoU +,CR44894 - chrX_17_10140001 chrX_10140001 EF39_1-HE 3436 chrX 10168575 10168612 chrX 10168682 10168719 8 107 2.5 4.5 3.5 1.8 144 chrX 10168575 intron,intron CR44894 -,CG43902 + chrX 10168647 intron,intron CR44894 -,CG43902 + chrX 10168719 intron,intron CR44894 -,CG43902 + chrX_8_10165001 chrX_10165001 EF39_1-HE 3437 chrX 10182988 10183002 chrX 10183090 10183109 5 106 14.0 6.5 10.2 0.4 121 chrX 10182988 intron,intron CR44894 -,CG43902 + chrX 10183048 intron,intron CR44894 -,CG43902 + chrX 10183109 intron,intron CR44894 -,CG43902 + chrX_5_10180001 chrX_10180001 EF39_1-HE 3438 chrX 10199137 10199165 chrX 10199242 10199270 8 102 0.0 2.5 1.2 3.6 133 chrX 10199137 intron CR44894 - chrX 10199204 intron CR44894 - chrX 10199270 intron CR44894 - chrX_8_10195001 chrX_10195001 EF39_1-HE 3439 chrX 10198896 10198913 chrX 10199285 10199315 5 392 15.0 3.0 9.0 0.5 419 chrX 10198896 intron CR44894 - chrX 10199106 intron CR44894 - chrX 10199315 intron CR44894 - chrX_5_10195001 chrX_10195001 EF39_1-HE 3440 chrX 10216822 10216852 chrX 10216929 10216959 9 106 9.5 15.5 12.5 0.7 137 chrX 10216822 3` UTR l(1)G0230 + chrX 10216890 3` UTR l(1)G0230 + chrX 10216959 3` UTR l(1)G0230 + chrX_9_10215001 chrX_10215001 EF39_1-HE 3441 chrX 10219283 10219327 chrX 10219449 10219493 20 165 3.0 0.0 1.5 8.0 210 chrX 10219283 5` UTR CR45629 + chrX 10219388 intergenic CR45629 +,CG15308 - chrX 10219493 intergenic CR45629 +,CG15308 - chrX_20_10215001 chrX_10215001 EF39_1-HE 3442 chrX 10222892 10222917 chrX 10223482 10223507 8 590 5.5 5.0 5.2 1.3 615 chrX 10222892 intron CG34408 + chrX 10223200 exon CG34408 + chrX 10223507 intron CG34408 + chrX_8_10220001 chrX_10220001 EF39_1-HE 3443 chrX 10222918 10222947 chrX 10223480 10223537 14 588 3.5 5.0 4.2 2.7 619 chrX 10222918 exon CG34408 + chrX 10223228 exon CG34408 + chrX 10223537 intron CG34408 + chrX_14_10220001 chrX_10220001 EF39_1-HE 3444 chrX 10267296 10267325 chrX 10276472 10276501 roo 5 9176 1.0 5.5 3.2 1.2 9205 chrX 10267296 3` UTR alpha-Man-I - chrX 10271898 intron alpha-Man-I - chrX 10276501 3` UTR alpha-Man-I - chrX_5_10270001 chrX_10270001 EF39_1-HE 3445 chrX 10286326 10286363 chrX 10286430 10286466 11 103 5.0 4.5 4.8 1.9 140 chrX 10286326 intron alpha-Man-I - chrX 10286396 intron alpha-Man-I - chrX 10286466 intron alpha-Man-I - chrX_11_10285001 chrX_10285001 EF39_1-HE 3446 chrX 10289390 10289437 chrX 10289494 10289541 9 104 4.0 4.5 4.2 1.7 151 chrX 10289390 intron alpha-Man-I - chrX 10289466 intron alpha-Man-I - chrX 10289541 intron alpha-Man-I - chrX_9_10285001 chrX_10285001 EF39_1-HE 3447 chrX 10290510 10290542 chrX 10290641 10290672 5 131 0.0 8.0 4.0 1.0 162 chrX 10290510 intron alpha-Man-I - chrX 10290591 intron alpha-Man-I - chrX 10290672 intron alpha-Man-I - chrX_5_10290001 chrX_10290001 EF39_1-HE 3448 chrX 10317530 10317577 chrX 10317634 10317681 9 104 0.0 1.0 0.5 6.0 151 chrX 10317530 intron alpha-Man-I - chrX 10317606 intron alpha-Man-I - chrX 10317681 intron alpha-Man-I - chrX_9_10315001 chrX_10315001 EF39_1-HE 3449 chrX 10403499 10403551 chrX 10403617 10403669 20 118 5.0 2.5 3.8 4.2 170 chrX 10403499 intron flw + chrX 10403584 intron flw + chrX 10403669 intron flw + chrX_20_10400001 chrX_10400001 EF39_1-HE 3450 chrX 10431310 10431366 chrX 10431416 10431472 12 106 2.5 6.0 4.2 2.3 162 chrX 10431310 intron CG32683 - chrX 10431391 intron CG32683 - chrX 10431472 intron CG32683 - chrX_12_10430001 chrX_10430001 EF39_1-HE 3451 chrX 10502910 10502940 chrX 10503020 10503050 10 110 6.5 3.5 5.0 1.7 140 chrX 10502910 intron spri - chrX 10502980 intron spri - chrX 10503050 intron spri - chrX_10_10500001 chrX_10500001 EF39_1-HE 3452 chrX 10532486 10532525 chrX 10532590 10532630 13 105 6.5 9.0 7.8 1.5 144 chrX 10532486 intron spri - chrX 10532558 intron spri - chrX 10532630 intron spri - chrX_13_10530001 chrX_10530001 EF39_1-HE 3453 chrX 10533389 10533430 chrX 10533506 10533547 14 116 3.0 5.5 4.2 2.7 158 chrX 10533389 intron spri - chrX 10533468 intron spri - chrX 10533547 intron spri - chrX_14_10530001 chrX_10530001 EF39_1-HE 3454 chrX 10537138 10537186 chrX 10537247 10537295 10 109 3.0 3.5 3.2 2.4 157 chrX 10537138 intron spri - chrX 10537216 intron spri - chrX 10537295 intron spri - chrX_10_10535001 chrX_10535001 EF39_1-HE 3455 chrX 10550835 10550884 chrX 10552328 10552377 hobo 17 1491 7.5 5.0 6.2 2.4 1542 chrX 10550835 intron spri - chrX 10551606 intron spri - chrX 10552377 intron spri - chrX_17_10550001 chrX_10550001 EF39_1-HE 3456 chrX 10563254 10563295 chrX 10563357 10563398 8 103 2.0 4.0 3.0 2.0 144 chrX 10563254 intron spri - chrX 10563326 intron spri - chrX 10563398 intron spri - chrX_8_10560001 chrX_10560001 EF39_1-HE 3457 chrX 10651623 10651644 chrX 10651765 10651786 4 142 3.5 3.0 3.2 1.0 163 chrX 10651623 intron X11Lbeta + chrX 10651704 intron X11Lbeta + chrX 10651786 intron X11Lbeta + chrX_4_10650001 chrX_10650001 EF39_1-HE 3458 chrX 10686029 10686083 chrX 10691191 10691246 roo 11 5163 5.0 2.5 3.8 2.3 5217 chrX 10686029 intron X11Lbeta + chrX 10688638 intron X11Lbeta + chrX 10691246 intron X11Lbeta + chrX_11_10685001 chrX_10685001 EF39_1-HE 3459 chrX 10694129 10694159 chrX 10694232 10694265 17 105 9.5 6.5 8.0 1.9 136 chrX 10694129 intron X11Lbeta + chrX 10694197 intron X11Lbeta + chrX 10694265 intron X11Lbeta + chrX_17_10690001 chrX_10690001 EF39_1-HE 3460 chrX 10719132 10719139 chrX 10719235 10719249 5 108 0.0 6.0 3.0 1.2 117 chrX 10719132 intron CG32676 - chrX 10719190 intron CG32676 - chrX 10719249 intron CG32676 - chrX_5_10715001 chrX_10715001 EF39_1-HE 3461 chrX 10735418 10735444 chrX 10735535 10735561 12 117 6.5 3.5 5.0 2.0 143 chrX 10735418 intron CG32676 - chrX 10735490 intron CG32676 - chrX 10735561 intron CG32676 - chrX_12_10735001 chrX_10735001 EF39_1-HE 3462 chrX 10772649 10772695 chrX 10772758 10772804 Tirant 10 109 5.0 2.0 3.5 2.2 155 chrX 10772649 intron CG15211 + chrX 10772726 intron CG15211 + chrX 10772804 intron CG15211 + chrX_10_10770001 chrX_10770001 EF39_1-HE 3463 chrX 10803006 10803038 chrX 10803122 10803154 16 115 7.0 7.0 7.0 2.0 148 chrX 10803006 intron Imp - chrX 10803080 intron Imp - chrX 10803154 intron Imp - chrX_16_10800001 chrX_10800001 EF39_1-HE 3464 chrX 10811114 10811163 chrX 10811218 10811267 17 103 5.0 4.5 4.8 2.9 153 chrX 10811114 intron Imp - chrX 10811190 intron Imp - chrX 10811267 intron Imp - chrX_17_10810001 chrX_10810001 EF39_1-HE 3465 chrX 10866620 10866668 chrX 10866730 10866778 14 109 3.5 7.5 5.5 2.2 158 chrX 10866620 intergenic CG2186 + chrX 10866699 intergenic CG2186 + chrX 10866778 intergenic not near genes chrX_14_10865001 chrX_10865001 EF39_1-HE 3466 chrX 10933893 10933936 chrX 10934007 10934050 6 114 0.0 1.5 0.8 3.3 157 chrX 10933893 intron Myo10A + chrX 10933972 intron Myo10A + chrX 10934050 intron Myo10A + chrX_6_10930001 chrX_10930001 EF39_1-HE 3467 chrX 10978637 10978678 chrX 10978743 10978777 5 105 2.5 6.0 4.2 1.0 140 chrX 10978637 intron CG42339 - chrX 10978707 intron CG42339 - chrX 10978777 intron CG42339 - chrX_5_10975001 chrX_10975001 EF39_1-HE 3468 chrX 11021918 11021952 chrX 11022024 11022059 8 107 2.5 4.0 3.2 1.9 141 chrX 11021918 intron CG42339 - chrX 11021988 intron CG42339 - chrX 11022059 intron CG42339 - chrX_8_11020001 chrX_11020001 EF39_1-HE 3469 chrX 11084839 11084866 chrX 11084977 11085004 10 138 4.5 4.0 4.2 1.9 165 chrX 11084839 intron sev - chrX 11084922 intron sev - chrX 11085004 intron sev - chrX_10_11080001 chrX_11080001 EF39_1-HE 3470 chrX 11095988 11096029 chrX 11103116 11103157 HMS-Beagle 10 7127 0.0 4.0 2.0 3.3 7169 chrX 11095988 intergenic not near genes chrX 11099572 intergenic not near genes chrX 11103157 intron CG42249 + chrX_10_11095001 chrX_11095001 EF39_1-HE 3471 chrX 11141951 11142062 chrX 11142053 11142164 12 102 0.0 1.0 0.5 8.0 213 chrX 11141951 intergenic CG15199 - chrX 11142058 intergenic CG15199 -,CG15202 + chrX 11142164 intergenic CG15199 -,CG15202 + chrX_12_11140001 chrX_11140001 EF39_1-HE 3472 chrX 11170801 11170833 chrX 11170906 11170938 5 105 0.0 0.0 0.0 5.0 137 chrX 11170801 intergenic CG1394 - chrX 11170870 intergenic CG1394 - chrX 11170938 intergenic CG1394 - chrX_5_11170001 chrX_11170001 EF39_1-HE 3473 chrX 11184225 11184250 chrX 11189330 11189349 flea 4 5104 7.5 4.5 6.0 0.6 5124 chrX 11184225 intergenic not near genes chrX 11186787 intergenic not near genes chrX 11189349 intergenic not near genes chrX_4_11185001 chrX_11185001 EF39_1-HE 3474 chrX 11191868 11191923 chrX 11191972 11192027 13 104 3.5 2.5 3.0 3.2 159 chrX 11191868 intergenic not near genes chrX 11191948 intergenic not near genes chrX 11192027 intergenic not near genes chrX_13_11190001 chrX_11190001 EF39_1-HE 3475 chrX 11255039 11255091 chrX 11255144 11255196 25 105 5.0 8.0 6.5 3.3 157 chrX 11255039 intron CG44422 - chrX 11255118 intron CG44422 - chrX 11255196 intron CG44422 - chrX_25_11255001 chrX_11255001 EF39_1-HE 3476 chrX 11263215 11263249 chrX 11263337 11263371 8 122 1.5 4.0 2.8 2.1 156 chrX 11263215 intron CG44422 - chrX 11263293 intron CG44422 - chrX 11263371 intron CG44422 - chrX_8_11260001 chrX_11260001 EF39_1-HE 3477 chrX 11268542 11268594 chrX 11270061 11270113 hopper2 14 1518 4.0 8.5 6.2 1.9 1571 chrX 11268542 intron CG44422 - chrX 11269328 intron CG44422 - chrX 11270113 intron CG44422 - chrX_14_11265001 chrX_11265001 EF39_1-HE 3478 chrX 11291355 11291406 chrX 11291462 11291513 12 107 4.5 3.0 3.8 2.5 158 chrX 11291355 intron CG44422 - chrX 11291434 intron CG44422 - chrX 11291513 intron CG44422 - chrX_12_11290001 chrX_11290001 EF39_1-HE 3479 chrX 11307345 11307367 chrX 11307448 11307463 8 102 4.5 8.0 6.2 1.1 118 chrX 11307345 intergenic not near genes chrX 11307404 intergenic not near genes chrX 11307463 intergenic not near genes chrX_8_11305001 chrX_11305001 EF39_1-HE 3480 chrX 11312037 11312076 chrX 11319416 11319455 Stalker2 7 7378 3.0 5.5 4.2 1.3 7418 chrX 11312037 intergenic not near genes chrX 11315746 intergenic not near genes chrX 11319455 intergenic not near genes chrX_7_11315001 chrX_11315001 EF39_1-HE 3481 chrX 11383910 11383956 chrX 11384013 11384059 17 103 5.5 4.5 5.0 2.8 149 chrX 11383910 intron dlg1 + chrX 11383984 intron dlg1 + chrX 11384059 intron dlg1 + chrX_17_11380001 chrX_11380001 EF39_1-HE 3482 chrX 11441981 11441999 chrX 11442085 11442103 6 104 0.0 2.0 1.0 3.0 122 chrX 11441981 intron Evi5 - chrX 11442042 intron Evi5 - chrX 11442103 intron Evi5 - chrX_6_11440001 chrX_11440001 EF39_1-HE 3483 chrX 11535016 11535033 chrX 11541512 11541529 Burdock 4 6496 5.0 1.5 3.2 1.0 6513 chrX 11535016 intron Drak + chrX 11538272 intron Drak + chrX 11541529 intron Drak + chrX_4_11535001 chrX_11535001 EF39_1-HE 3484 chrX 11571435 11571442 chrX 11571702 11571709 pogo 5 267 8.0 5.0 6.5 0.7 274 chrX 11571435 3` UTR Kmn1 - chrX 11571572 3` UTR Kmn1 - chrX 11571709 3` UTR Kmn1 - chrX_5_11570001 chrX_11570001 EF39_1-HE 3485 chrX 11571444 11571483 chrX 11571701 11571750 pogo 8 266 3.0 5.0 4.0 1.6 306 chrX 11571444 3` UTR Kmn1 - chrX 11571597 3` UTR Kmn1 - chrX 11571750 3` UTR Kmn1 - chrX_8_11570001 chrX_11570001 EF39_1-HE 3486 chrX 11633411 11633445 chrX 11640495 11640529 297 14 7084 1.5 8.5 5.0 2.3 7118 chrX 11633411 intron Ptp10D + chrX 11636970 intron Ptp10D + chrX 11640529 intron Ptp10D + chrX_14_11635001 chrX_11635001 EF39_1-HE 3487 chrX 11645095 11645126 chrX 11648291 11648322 NOF 11 3195 4.5 5.5 5.0 1.8 3227 chrX 11645095 intron Ptp10D + chrX 11646708 intron Ptp10D + chrX 11648322 intron Ptp10D + chrX_11_11645001 chrX_11645001 EF39_1-HE 3488 chrX 11645127 11645139 chrX 11648277 11648335 NOF 9 3191 2.0 3.5 2.8 2.4 3208 chrX 11645127 intron Ptp10D + chrX 11646731 intron Ptp10D + chrX 11648335 intron Ptp10D + chrX_9_11645001 chrX_11645001 EF39_1-HE 3489 chrX 11658666 11658680 chrX 11658770 11658784 6 104 8.5 7.0 7.8 0.7 118 chrX 11658666 intron Ptp10D + chrX 11658725 intron Ptp10D + chrX 11658784 intron Ptp10D + chrX_6_11655001 chrX_11655001 EF39_1-HE 3490 chrX 11801569 11801574 chrX 11801671 11801676 4 102 3.5 1.0 2.2 1.2 107 chrX 11801569 3` UTR CkIIbeta + chrX 11801622 intergenic CkIIbeta +,Hsc70-3 - chrX 11801676 intergenic Hsc70-3 -,CkIIbeta + chrX_4_11800001 chrX_11800001 EF39_1-HE 3491 chrX 11807280 11807325 chrX 11807390 11807435 9 110 1.5 2.5 2.0 3.0 155 chrX 11807280 intergenic Hsc70-3 - chrX 11807358 intergenic Hsc70-3 - chrX 11807435 intergenic Hsc70-3 - chrX_9_11805001 chrX_11805001 EF39_1-HE 3492 chrX 11880901 11880913 chrX 11881009 11881021 5 108 6.5 3.0 4.8 0.9 120 chrX 11880901 exon CG10353 - chrX 11880961 intron CG10353 - chrX 11881021 intron CG10353 - chrX_5_11880001 chrX_11880001 EF39_1-HE 3493 chrX 11922362 11922382 chrX 11922540 11922560 6 178 3.5 3.5 3.5 1.3 198 chrX 11922362 exon Sclp - chrX 11922461 intron Sclp - chrX 11922560 intron Sclp - chrX_6_11920001 chrX_11920001 EF39_1-HE 3494 chrX 12129238 12129255 chrX 12129348 12129365 6 110 2.5 3.0 2.8 1.6 127 chrX 12129238 intron Ten-a + chrX 12129302 intron Ten-a + chrX 12129365 intron Ten-a + chrX_6_12125001 chrX_12125001 EF39_1-HE 3495 chrX 12159591 12159639 chrX 12159693 12159741 8 99 1.0 2.0 1.5 3.2 150 chrX 12159591 intron Ten-a + chrX 12159666 intron Ten-a + chrX 12159741 intron Ten-a + chrX_8_12155001 chrX_12155001 EF39_1-HE 3496 chrX 12168112 12168152 chrX 12173580 12173620 I-element 14 5468 3.0 3.5 3.2 3.3 5508 chrX 12168112 intron Ten-a + chrX 12170866 intron Ten-a + chrX 12173620 intron Ten-a + chrX_14_12170001 chrX_12170001 EF39_1-HE 3497 chrX 12231184 12231224 chrX 12231297 12231337 6 113 0.5 4.0 2.2 1.9 153 chrX 12231184 intron Ten-a + chrX 12231260 intron Ten-a + chrX 12231337 intron Ten-a + chrX_6_12230001 chrX_12230001 EF39_1-HE 3498 chrX 12294977 12295031 chrX 12295090 12295166 16 126 4.0 0.0 2.0 5.3 189 chrX 12294977 intron Ten-a + chrX 12295072 intron Ten-a + chrX 12295166 intron Ten-a + chrX_16_12295001 chrX_12295001 EF39_1-HE 3499 chrX 12301934 12301962 chrX 12303266 12303294 X-element 6 1332 2.5 0.0 1.2 2.7 1360 chrX 12301934 intron Ten-a + chrX 12302614 intron Ten-a + chrX 12303294 intron Ten-a + chrX_6_12300001 chrX_12300001 EF39_1-HE 3500 chrX 12347505 12347558 chrX 12347776 12347829 21 270 3.0 8.0 5.5 3.2 324 chrX 12347505 intergenic not near genes chrX 12347667 intergenic not near genes chrX 12347829 intergenic not near genes chrX_21_12345001 chrX_12345001 EF39_1-HE 3501 chrX 12375468 12375500 chrX 12375593 12375620 9 124 8.5 3.5 6.0 1.3 152 chrX 12375468 intergenic Ir11a - chrX 12375544 intergenic Ir11a - chrX 12375620 exon Ir11a - chrX_9_12375001 chrX_12375001 EF39_1-HE 3502 chrX 12381849 12381901 chrX 12385788 12385829 flea 4 3936 0.0 4.0 2.0 1.3 3980 chrX 12381849 intergenic not near genes chrX 12383839 intergenic not near genes chrX 12385829 intergenic not near genes chrX_4_12380001 chrX_12380001 EF39_1-HE 3503 chrX 12395015 12395067 chrX 12395123 12395175 7 108 2.0 4.0 3.0 1.8 160 chrX 12395015 intergenic not near genes chrX 12395095 intergenic not near genes chrX 12395175 intergenic not near genes chrX_7_12395001 chrX_12395001 EF39_1-HE 3504 chrX 12430934 12431164 chrX 12431038 12431273 12 106 4.0 6.5 5.2 1.9 339 chrX 12430934 intergenic not near genes chrX 12431104 intergenic not near genes chrX 12431273 intergenic not near genes chrX_12_12430001 chrX_12430001 EF39_1-HE 3505 chrX 12454332 12454383 chrX 12454436 12454487 23 103 4.0 3.0 3.5 5.1 155 chrX 12454332 intergenic CG15927 + chrX 12454410 intergenic CG15927 + chrX 12454487 intergenic CG15927 + chrX_23_12450001 chrX_12450001 EF39_1-HE 3506 chrX 12464958 12465012 chrX 12465070 12465124 18 112 3.5 4.0 3.8 3.8 166 chrX 12464958 intron CG42258 + chrX 12465041 intron CG42258 + chrX 12465124 intron CG42258 + chrX_18_12465001 chrX_12465001 EF39_1-HE 3507 chrX 12469587 12469642 chrX 12469746 12469801 18 159 5.0 1.5 3.2 4.3 214 chrX 12469587 intron CG42258 + chrX 12469694 intron CG42258 + chrX 12469801 intron CG42258 + chrX_18_12465001 chrX_12465001 EF39_1-HE 3508 chrX 12510833 12510847 chrX 12510965 12511002 5 150 2.0 7.0 4.5 0.9 169 chrX 12510833 intron CG2556 + chrX 12510918 intron CG2556 + chrX 12511002 intron CG2556 + chrX_5_12510001 chrX_12510001 EF39_1-HE 3509 chrX 12511296 12511342 chrX 12511406 12511454 5 111 0.0 1.0 0.5 3.3 158 chrX 12511296 intron CG2556 + chrX 12511375 intron CG2556 + chrX 12511454 intron CG2556 + chrX_5_12510001 chrX_12510001 EF39_1-HE 3510 chrX 12531694 12531705 chrX 12531802 12531813 6 108 1.0 2.5 1.8 2.1 119 chrX 12531694 intron CG43921 - chrX 12531754 intron CG43921 - chrX 12531813 intron CG43921 - chrX_6_12530001 chrX_12530001 EF39_1-HE 3511 chrX 12531710 12531739 chrX 12531793 12531847 6 104 1.0 2.0 1.5 2.4 137 chrX 12531710 intron CG43921 - chrX 12531778 intron CG43921 - chrX 12531847 intron CG43921 - chrX_6_12530001 chrX_12530001 EF39_1-HE 3512 chrX 12537519 12537568 chrX 12537621 12537670 9 102 1.5 2.5 2.0 3.0 151 chrX 12537519 intron CG43921 - chrX 12537594 intron CG43921 - chrX 12537670 intron CG43921 - chrX_9_12535001 chrX_12535001 EF39_1-HE 3513 chrX 12557132 12557162 chrX 12557234 12557264 8 102 5.0 9.5 7.2 1.0 132 chrX 12557132 intron CG43921 - chrX 12557198 intron CG43921 - chrX 12557264 intron CG43921 - chrX_8_12555001 chrX_12555001 EF39_1-HE 3514 chrX 12595817 12595888 chrX 12595952 12596009 12 130 0.0 4.5 2.2 3.8 192 chrX 12595817 intergenic CG1824 -,Sec16 + chrX 12595913 intergenic Sec16 +,CG1824 - chrX 12596009 intergenic Sec16 +,CG1824 - chrX_12_12595001 chrX_12595001 EF39_1-HE 3515 chrX 12646870 12646891 chrX 12647004 12647027 4 134 6.5 9.5 8.0 0.4 157 chrX 12646870 intron Tomosyn + chrX 12646948 intron Tomosyn + chrX 12647027 intron Tomosyn + chrX_4_12645001 chrX_12645001 EF39_1-HE 3516 chrX 12670609 12670666 chrX 12670722 12670779 18 113 6.0 4.0 5.0 3.0 170 chrX 12670609 intron Tis11 + chrX 12670694 intron Tis11 + chrX 12670779 intron Tis11 + chrX_18_12670001 chrX_12670001 EF39_1-HE 3517 chrX 12694164 12694201 chrX 12694271 12694308 9 106 7.5 3.5 5.5 1.4 144 chrX 12694164 intron Smr - chrX 12694236 intron Smr - chrX 12694308 intron Smr - chrX_9_12690001 chrX_12690001 EF39_1-HE 3518 chrX 12772718 12772760 chrX 12772820 12772862 10 102 3.5 2.0 2.8 2.6 144 chrX 12772718 3` UTR,3` UTR CG3812 +,CG32647 - chrX 12772790 3` UTR,3` UTR CG3812 +,CG32647 - chrX 12772862 3` UTR CG32647 - chrX_10_12770001 chrX_12770001 EF39_1-HE 3519 chrX 12822198 12822247 chrX 12822355 12822404 10 157 4.0 4.0 4.0 2.0 206 chrX 12822198 intron Pde9 - chrX 12822301 intron Pde9 - chrX 12822404 intron Pde9 - chrX_10_12820001 chrX_12820001 EF39_1-HE 3520 chrX 12825730 12825788 chrX 12825832 12825890 24 101 6.0 7.0 6.5 3.2 160 chrX 12825730 intron Pde9 - chrX 12825810 intron Pde9 - chrX 12825890 intron Pde9 - chrX_24_12825001 chrX_12825001 EF39_1-HE 3521 chrX 12858242 12858271 chrX 12858350 12858379 12 108 3.5 2.5 3.0 3.0 137 chrX 12858242 intron Pde9 - chrX 12858310 intron Pde9 - chrX 12858379 intron Pde9 - chrX_12_12855001 chrX_12855001 EF39_1-HE 3522 chrX 12930573 12930599 chrX 12937715 12937741 HMS-Beagle 5 7142 1.0 5.0 3.0 1.2 7168 chrX 12930573 intron fne + chrX 12934157 intron fne + chrX 12937741 intron fne + chrX_5_12930001 chrX_12930001 EF39_1-HE 3523 chrX 12953864 12953919 chrX 12954028 12954083 8 164 4.0 4.5 4.2 1.5 219 chrX 12953864 intron hec - chrX 12953974 intron hec - chrX 12954083 intron hec - chrX_8_12950001 chrX_12950001 EF39_1-HE 3524 chrX 12977044 12977061 chrX 12977146 12977163 4 102 4.0 7.5 5.8 0.6 119 chrX 12977044 intergenic not near genes chrX 12977104 intergenic not near genes chrX 12977163 intergenic not near genes chrX_4_12975001 chrX_12975001 EF39_1-HE 3525 chrX 12990406 12990461 chrX 12990520 12990580 4 118 1.0 4.5 2.8 1.1 174 chrX 12990406 intron rad + chrX 12990493 intron rad + chrX 12990580 intron rad + chrX_4_12990001 chrX_12990001 EF39_1-HE 3526 chrX 12993672 12993705 chrX 12993815 12993819 4 136 2.0 3.0 2.5 1.1 147 chrX 12993672 intron rad + chrX 12993746 intron rad + chrX 12993819 intron rad + chrX_4_12990001 chrX_12990001 EF39_1-HE 3527 chrX 13067862 13067868 chrX 13067974 13067981 4 112 7.0 0.0 3.5 0.9 119 chrX 13067862 intron rad + chrX 13067922 intron rad + chrX 13067981 intron rad + chrX_4_13065001 chrX_13065001 EF39_1-HE 3528 chrX 13146572 13146625 chrX 13146686 13146737 13 113 6.0 2.0 4.0 2.6 165 chrX 13146572 intron CG32645 + chrX 13146654 intron CG32645 + chrX 13146737 intron CG32645 + chrX_13_13145001 chrX_13145001 EF39_1-HE 3529 chrX 13172323 13172376 chrX 13172425 13172478 15 102 5.0 3.5 4.2 2.9 155 chrX 13172323 exon CG34411 - chrX 13172400 intron CG34411 - chrX 13172478 intron CG34411 - chrX_15_13170001 chrX_13170001 EF39_1-HE 3530 chrX 13210013 13210061 chrX 13210139 13210186 4 125 4.5 2.0 3.2 1.0 173 chrX 13210013 intron sno - chrX 13210100 intron sno - chrX 13210186 intron sno - chrX_4_13210001 chrX_13210001 EF39_1-HE 3531 chrX 13227278 13227299 chrX 13227382 13227403 5 104 1.5 2.5 2.0 1.7 125 chrX 13227278 intron mew - chrX 13227340 intron mew - chrX 13227403 intron mew - chrX_5_13225001 chrX_13225001 EF39_1-HE 3532 chrX 13229866 13229886 chrX 13229970 13229990 7 104 0.0 3.5 1.8 2.5 124 chrX 13229866 intron mew - chrX 13229928 intron mew - chrX 13229990 intron mew - chrX_7_13225001 chrX_13225001 EF39_1-HE 3533 chrX 13239398 13239421 chrX 13239518 13239550 6 125 0.0 3.5 1.8 2.1 152 chrX 13239398 intron mew - chrX 13239474 intron mew - chrX 13239550 intron mew - chrX_6_13235001 chrX_13235001 EF39_1-HE 3534 chrX 13239724 13239754 chrX 13239830 13239861 11 107 3.5 5.5 4.5 2.0 137 chrX 13239724 intron mew - chrX 13239792 intron mew - chrX 13239861 intron mew - chrX_11_13235001 chrX_13235001 EF39_1-HE 3535 chrX 13255198 13255216 chrX 13255306 13255331 4 112 1.0 3.0 2.0 1.3 133 chrX 13255198 intron mew - chrX 13255264 intron mew - chrX 13255331 intron mew - chrX_4_13255001 chrX_13255001 EF39_1-HE 3536 chrX 13269200 13269213 chrX 13269302 13269315 4 102 0.0 0.0 0.0 4.0 115 chrX 13269200 intron HDAC4 - chrX 13269258 intron HDAC4 - chrX 13269315 intron HDAC4 - chrX_4_13265001 chrX_13265001 EF39_1-HE 3537 chrX 13278155 13278171 chrX 13278264 13278280 6 109 5.0 8.0 6.5 0.8 125 chrX 13278155 intron HDAC4 - chrX 13278218 intron HDAC4 - chrX 13278280 intron HDAC4 - chrX_6_13275001 chrX_13275001 EF39_1-HE 3538 chrX 13320617 13320653 chrX 13320832 13320868 10 215 5.5 4.0 4.8 1.7 251 chrX 13320617 intron IP3K2 + chrX 13320742 intron IP3K2 + chrX 13320868 intron IP3K2 + chrX_10_13320001 chrX_13320001 EF39_1-HE 3539 chrX 13336691 13336741 chrX 13336821 13336870 10 128 3.5 4.0 3.8 2.1 179 chrX 13336691 intron RpS15Aa - chrX 13336780 intron RpS15Aa - chrX 13336870 intron RpS15Aa - chrX_10_13335001 chrX_13335001 EF39_1-HE 3540 chrX 13342401 13342414 chrX 13342504 13342517 4 104 5.0 0.5 2.8 1.1 116 chrX 13342401 intergenic not near genes chrX 13342459 intergenic not near genes chrX 13342517 intergenic not near genes chrX_4_13340001 chrX_13340001 EF39_1-HE 3541 chrX 13401464 13401508 chrX 13401842 13401886 jockey 5 378 3.0 0.5 1.8 1.8 422 chrX 13401464 intergenic CG1673 +,CG12725 - chrX 13401675 intergenic CG12725 -,CG1673 + chrX 13401886 3` UTR CG12725 - chrX_5_13400001 chrX_13400001 EF39_1-HE 3542 chrX 13403000 13403043 chrX 13403153 13403194 X-element 8 153 5.0 3.5 4.2 1.5 194 chrX 13403000 intergenic CG12725 - chrX 13403097 intergenic CG12725 - chrX 13403194 intergenic CG12725 - chrX_8_13400001 chrX_13400001 EF39_1-HE 3543 chrX 13429273 13429325 chrX 13429384 13429436 7 111 2.5 0.0 1.2 3.2 163 chrX 13429273 intergenic not near genes chrX 13429354 intergenic not near genes chrX 13429436 intergenic not near genes chrX_7_13425001 chrX_13425001 EF39_1-HE 3544 chrX 13429469 13429488 chrX 13430644 13430663 jockey 4 1175 0.0 8.0 4.0 0.8 1194 chrX 13429469 intergenic not near genes chrX 13430066 intergenic not near genes chrX 13430663 intergenic not near genes chrX_4_13430001 chrX_13430001 EF39_1-HE 3545 chrX 13441115 13441148 chrX 13441218 13441251 6 103 2.5 9.5 6.0 0.9 136 chrX 13441115 intergenic not near genes chrX 13441183 intergenic not near genes chrX 13441251 intergenic not near genes chrX_6_13440001 chrX_13440001 EF39_1-HE 3546 chrX 13443385 13443410 chrX 13443488 13443513 4 103 9.5 4.5 7.0 0.5 128 chrX 13443385 intergenic not near genes chrX 13443449 intergenic not near genes chrX 13443513 intergenic not near genes chrX_4_13440001 chrX_13440001 EF39_1-HE 3547 chrX 13458631 13458642 chrX 13458737 13458748 4 106 7.0 0.0 3.5 0.9 117 chrX 13458631 intron Neto + chrX 13458690 intron Neto + chrX 13458748 intron Neto + chrX_4_13455001 chrX_13455001 EF39_1-HE 3548 chrX 13463627 13463666 chrX 13469230 13469269 mdg3 10 5603 4.0 4.0 4.0 2.0 5642 chrX 13463627 intron Neto + chrX 13466448 intron Neto + chrX 13469269 intron Neto + chrX_10_13465001 chrX_13465001 EF39_1-HE 3549 chrX 13482168 13482214 chrX 13482303 13482349 9 134 3.5 3.0 3.2 2.1 181 chrX 13482168 intron Neto + chrX 13482258 intron Neto + chrX 13482349 intron Neto + chrX_9_13480001 chrX_13480001 EF39_1-HE 3550 chrX 13513876 13513909 chrX 13513990 13514023 13 114 11.0 1.5 6.2 1.8 147 chrX 13513876 intron Neto + chrX 13513950 intron Neto + chrX 13514023 intron Neto + chrX_13_13510001 chrX_13510001 EF39_1-HE 3551 chrX 13563395 13563448 chrX 13563501 13563554 21 106 3.0 4.0 3.5 4.7 159 chrX 13563395 intergenic CG32633 +,Tango13 + chrX 13563474 intergenic CG32633 +,Tango13 + chrX 13563554 intergenic CG32633 +,Tango13 + chrX_21_13560001 chrX_13560001 EF39_1-HE 3552 chrX 13577733 13577776 chrX 13577835 13577878 11 102 5.5 3.5 4.5 2.0 145 chrX 13577733 intron Tango13 + chrX 13577806 intron Tango13 + chrX 13577878 intron Tango13 + chrX_11_13575001 chrX_13575001 EF39_1-HE 3553 chrX 13628414 13628471 chrX 13628524 13628581 10 110 5.0 2.5 3.8 2.1 167 chrX 13628414 intron NFAT + chrX 13628498 intron NFAT + chrX 13628581 intron NFAT + chrX_10_13625001 chrX_13625001 EF39_1-HE 3554 chrX 13642210 13642220 chrX 13642375 13642385 5 164 8.0 3.5 5.8 0.7 175 chrX 13642210 intron NFAT + chrX 13642298 intron NFAT + chrX 13642385 intron NFAT + chrX_5_13640001 chrX_13640001 EF39_1-HE 3555 chrX 13653585 13653629 chrX 13653691 13653737 14 107 7.5 0.5 4.0 2.8 152 chrX 13653585 intron NFAT + chrX 13653661 intron NFAT + chrX 13653737 intron NFAT + chrX_14_13650001 chrX_13650001 EF39_1-HE 3556 chrX 13739003 13739060 chrX 13739110 13739167 21 107 4.5 5.5 5.0 3.5 164 chrX 13739003 intron,exon Grip91 -,CG11134 + chrX 13739085 intron,3` UTR Grip91 -,CG11134 + chrX 13739167 intron,3` UTR Grip91 -,CG11134 + chrX_21_13735001 chrX_13735001 EF39_1-HE 3557 chrX 13764462 13764514 chrX 13764593 13764645 10 131 4.0 3.5 3.8 2.1 183 chrX 13764462 intron rdgB + chrX 13764554 intron rdgB + chrX 13764645 intron rdgB + chrX_10_13760001 chrX_13760001 EF39_1-HE 3558 chrX 13789053 13789100 chrX 13789173 13789220 12 120 5.0 5.5 5.2 1.9 167 chrX 13789053 intron inaE + chrX 13789136 intron inaE + chrX 13789220 intron inaE + chrX_12_13785001 chrX_13785001 EF39_1-HE 3559 chrX 13798229 13798279 chrX 13798433 13798483 17 204 2.0 5.0 3.5 3.8 254 chrX 13798229 intron inaE + chrX 13798356 intron inaE + chrX 13798483 intron inaE + chrX_17_13795001 chrX_13795001 EF39_1-HE 3560 chrX 13908771 13908792 chrX 13908875 13908896 7 104 6.5 10.5 8.5 0.7 125 chrX 13908771 intron mamo - chrX 13908834 intron mamo - chrX 13908896 intron mamo - chrX_7_13905001 chrX_13905001 EF39_1-HE 3561 chrX 13921557 13921562 chrX 13921658 13921665 4 102 12.0 0.5 6.2 0.6 108 chrX 13921557 intron mamo - chrX 13921611 intron mamo - chrX 13921665 intron mamo - chrX_4_13920001 chrX_13920001 EF39_1-HE 3562 chrX 13937961 13937997 chrX 13941258 13941294 I-element 13 3297 3.0 3.0 3.0 3.2 3333 chrX 13937961 intron mamo - chrX 13939628 intron mamo - chrX 13941294 intron mamo - chrX_13_13935001 chrX_13935001 EF39_1-HE 3563 chrX 13961630 13961671 chrX 13962043 13962084 8 413 1.0 3.0 2.0 2.7 454 chrX 13961630 intron mamo - chrX 13961857 intron mamo - chrX 13962084 intron mamo - chrX_8_13960001 chrX_13960001 EF39_1-HE 3564 chrX 13964274 13964325 chrX 13964380 13964431 6 106 3.0 2.5 2.8 1.6 157 chrX 13964274 intron mamo - chrX 13964352 intron mamo - chrX 13964431 intron mamo - chrX_6_13960001 chrX_13960001 EF39_1-HE 3565 chrX 13975876 13975903 chrX 13975979 13976006 7 103 0.0 8.0 4.0 1.4 130 chrX 13975876 intron mamo - chrX 13975941 intron mamo - chrX 13976006 intron mamo - chrX_7_13975001 chrX_13975001 EF39_1-HE 3566 chrX 13991423 13991433 chrX 13991527 13991542 4 108 0.0 6.0 3.0 1.0 119 chrX 13991423 intergenic CR44655 + chrX 13991482 intergenic CR44655 + chrX 13991542 intergenic CR44655 + chrX_4_13990001 chrX_13990001 EF39_1-HE 3567 chrX 13997015 13997060 chrX 13997118 13997160 5 103 2.0 2.5 2.2 1.6 145 chrX 13997015 intron ben + chrX 13997088 intron ben + chrX 13997160 intron ben + chrX_5_13995001 chrX_13995001 EF39_1-HE 3568 chrX 14101746 14101802 chrX 14101966 14102022 11 220 2.5 5.0 3.8 2.3 276 chrX 14101746 intergenic not near genes chrX 14101884 intergenic not near genes chrX 14102022 intergenic not near genes chrX_11_14100001 chrX_14100001 EF39_1-HE 3569 chrX 14104997 14105021 chrX 14114174 14114198 roo 4 9177 8.0 4.5 6.2 0.6 9201 chrX 14104997 intergenic not near genes chrX 14109598 intergenic not near genes chrX 14114198 5` UTR CR44657 + chrX_4_14105001 chrX_14105001 EF39_1-HE 3570 chrX 14105024 14105051 chrX 14114192 14114218 roo 11 9175 4.5 6.5 5.5 1.7 9194 chrX 14105024 intergenic not near genes chrX 14109621 intergenic not near genes chrX 14114218 5` UTR CR44657 + chrX_11_14105001 chrX_14105001 EF39_1-HE 3571 chrX 14126969 14126981 chrX 14127074 14127086 5 105 3.0 2.5 2.8 1.3 117 chrX 14126969 intergenic not near genes chrX 14127028 intergenic not near genes chrX 14127086 intergenic not near genes chrX_5_14125001 chrX_14125001 EF39_1-HE 3572 chrX 14142862 14142876 chrX 14142965 14142979 8 103 8.5 4.5 6.5 1.1 117 chrX 14142862 intergenic not near genes chrX 14142920 intergenic not near genes chrX 14142979 intergenic not near genes chrX_8_14140001 chrX_14140001 EF39_1-HE 3573 chrX 14142877 14142902 chrX 14142980 14143005 18 103 6.0 5.0 5.5 2.8 128 chrX 14142877 intergenic not near genes chrX 14142941 intergenic not near genes chrX 14143005 intergenic not near genes chrX_18_14140001 chrX_14140001 EF39_1-HE 3574 chrX 14175132 14175151 chrX 14175238 14175257 5 106 7.0 9.5 8.2 0.5 125 chrX 14175132 exon CG1368 + chrX 14175194 exon CG1368 + chrX 14175257 exon CG1368 + chrX_5_14175001 chrX_14175001 EF39_1-HE 3575 chrX 14189849 14189890 chrX 14189970 14190008 6 120 2.5 1.0 1.8 2.1 159 chrX 14189849 exon CG11585 + chrX 14189928 exon CG11585 + chrX 14190008 exon CG11585 + chrX_6_14185001 chrX_14185001 EF39_1-HE 3576 chrX 14348906 14348956 chrX 14349047 14349097 8 141 1.0 3.0 2.0 2.7 191 chrX 14348906 intron dpr8 + chrX 14349002 intron dpr8 + chrX 14349097 intron dpr8 + chrX_8_14345001 chrX_14345001 EF39_1-HE 3577 chrX 14362107 14362129 chrX 14362235 14362257 5 128 7.0 0.5 3.8 1.0 150 chrX 14362107 intron dpr8 + chrX 14362182 intron dpr8 + chrX 14362257 intron dpr8 + chrX_5_14360001 chrX_14360001 EF39_1-HE 3578 chrX 14401529 14401570 chrX 14401664 14401705 10 134 3.0 3.0 3.0 2.5 176 chrX 14401529 intron dpr8 + chrX 14401617 intron dpr8 + chrX 14401705 intron dpr8 + chrX_10_14400001 chrX_14400001 EF39_1-HE 3579 chrX 14404995 14405026 chrX 14405099 14405106 4 98 2.5 4.0 3.2 1.0 111 chrX 14404995 intron dpr8 + chrX 14405050 intron dpr8 + chrX 14405106 intron dpr8 + chrX_4_14405001 chrX_14405001 EF39_1-HE 3580 chrX 14407249 14407511 chrX 14407357 14407622 5 109 3.5 0.5 2.0 1.7 373 chrX 14407249 intron dpr8 + chrX 14407436 intron dpr8 + chrX 14407622 intron dpr8 + chrX_5_14405001 chrX_14405001 EF39_1-HE 3581 chrX 14416286 14416334 chrX 14421080 14421127 F-element 11 4794 2.5 9.0 5.8 1.6 4841 chrX 14416286 intron dpr8 + chrX 14418706 intron dpr8 + chrX 14421127 intron dpr8 + chrX_11_14415001 chrX_14415001 EF39_1-HE 3582 chrX 14499648 14499673 chrX 14499756 14499781 6 107 3.5 2.5 3.0 1.5 133 chrX 14499648 intergenic not near genes chrX 14499714 intergenic not near genes chrX 14499781 intergenic not near genes chrX_6_14495001 chrX_14495001 EF39_1-HE 3583 chrX 14530627 14530666 chrX 14530730 14530769 17 103 6.0 6.5 6.2 2.4 142 chrX 14530627 intergenic not near genes chrX 14530698 intergenic not near genes chrX 14530769 intergenic not near genes chrX_17_14530001 chrX_14530001 EF39_1-HE 3584 chrX 14544334 14544391 chrX 14544448 14544505 21 114 4.5 3.5 4.0 4.2 171 chrX 14544334 intergenic not near genes chrX 14544420 intergenic not near genes chrX 14544505 intergenic not near genes chrX_21_14540001 chrX_14540001 EF39_1-HE 3585 chrX 14571765 14571821 chrX 14571870 14571926 18 105 1.5 5.0 3.2 4.3 161 chrX 14571765 intergenic not near genes chrX 14571846 intergenic not near genes chrX 14571926 intergenic not near genes chrX_18_14570001 chrX_14570001 EF39_1-HE 3586 chrX 14582333 14582386 chrX 14582453 14582506 21 120 1.5 3.5 2.5 6.0 173 chrX 14582333 exon mRpS25 - chrX 14582420 intron mRpS25 - chrX 14582506 exon mRpS25 - chrX_21_14580001 chrX_14580001 EF39_1-HE 3587 chrX 14589687 14589695 chrX 14589954 14589956 pogo 4 264 2.5 3.5 3.0 1.0 269 chrX 14589687 intron CG9413 - chrX 14589822 intron CG9413 - chrX 14589956 intron CG9413 - chrX_4_14585001 chrX_14585001 EF39_1-HE 3588 chrX 14590755 14590783 chrX 14590887 14590915 8 132 0.0 6.0 3.0 2.0 160 chrX 14590755 intron CG9413 - chrX 14590835 intron CG9413 - chrX 14590915 intron CG9413 - chrX_8_14590001 chrX_14590001 EF39_1-HE 3589 chrX 14593791 14593821 chrX 14593899 14593929 6 108 1.0 4.5 2.8 1.6 138 chrX 14593791 intron CG9413 - chrX 14593860 intron CG9413 - chrX 14593929 intron CG9413 - chrX_6_14590001 chrX_14590001 EF39_1-HE 3590 chrX 14597717 14597736 chrX 14597820 14597839 8 103 9.0 6.0 7.5 0.9 122 chrX 14597717 intron CG9413 - chrX 14597778 intron CG9413 - chrX 14597839 intron CG9413 - chrX_8_14595001 chrX_14595001 EF39_1-HE 3591 chrX 14620865 14620889 chrX 14620980 14621004 9 115 5.0 0.0 2.5 2.6 139 chrX 14620865 exon NetA - chrX 14620934 intron NetA - chrX 14621004 intron NetA - chrX_9_14620001 chrX_14620001 EF39_1-HE 3592 chrX 14636448 14636476 chrX 14641915 14641943 I-element 11 5466 8.5 6.5 7.5 1.3 5495 chrX 14636448 intron NetA - chrX 14639196 intron NetA - chrX 14641943 intron NetA - chrX_11_14635001 chrX_14635001 EF39_1-HE 3593 chrX 14649293 14649333 chrX 14649395 14649435 6 102 1.5 7.0 4.2 1.2 142 chrX 14649293 intron NetA - chrX 14649364 intron NetA - chrX 14649435 intron NetA - chrX_6_14645001 chrX_14645001 EF39_1-HE 3594 chrX 14674963 14675021 chrX 14675085 14675143 20 121 3.5 4.0 3.8 4.2 180 chrX 14674963 intergenic not near genes chrX 14675053 intergenic not near genes chrX 14675143 intergenic not near genes chrX_20_14675001 chrX_14675001 EF39_1-HE 3595 chrX 14684698 14684728 chrX 14684808 14684843 7 112 8.0 0.0 4.0 1.4 145 chrX 14684698 intergenic not near genes chrX 14684770 intergenic not near genes chrX 14684843 intergenic not near genes chrX_7_14680001 chrX_14680001 EF39_1-HE 3596 chrX 14693201 14693238 chrX 14693356 14693394 15 156 4.5 8.0 6.2 2.1 193 chrX 14693201 intron NetB - chrX 14693298 intron NetB - chrX 14693394 intron NetB - chrX_15_14690001 chrX_14690001 EF39_1-HE 3597 chrX 14726646 14726689 chrX 14726803 14726846 21 155 2.5 3.5 3.0 5.2 200 chrX 14726646 intron NetB - chrX 14726746 intron NetB - chrX 14726846 intron NetB - chrX_21_14725001 chrX_14725001 EF39_1-HE 3598 chrX 14742888 14742947 chrX 14743000 14743059 24 112 4.0 7.5 5.8 3.5 171 chrX 14742888 intron NetB - chrX 14742974 intron NetB - chrX 14743059 intron NetB - chrX_24_14740001 chrX_14740001 EF39_1-HE 3599 chrX 14774961 14775248 chrX 14775064 14775363 30 109 4.0 3.5 3.8 6.2 402 chrX 14774961 intergenic CG5334 + chrX 14775162 intergenic CG5334 + chrX 14775363 exon CG5334 + chrX_30_14775001 chrX_14775001 EF39_1-HE 3600 chrX 14778015 14778034 chrX 14782838 14782857 Doc 5 4823 6.5 5.5 6.0 0.7 4842 chrX 14778015 intergenic CG5347 + chrX 14780436 intergenic not near genes chrX 14782857 intergenic Ag5r2 - chrX_5_14780001 chrX_14780001 EF39_1-HE 3601 chrX 14790995 14791114 chrX 14791108 14791216 13 117 0.0 0.0 0.0 13.0 221 chrX 14790995 intron rut - chrX 14791106 intron rut - chrX 14791216 intron rut - chrX_13_14790001 chrX_14790001 EF39_1-HE 3602 chrX 14806731 14806772 chrX 14806845 14806886 21 114 4.0 0.0 2.0 7.0 155 chrX 14806731 intron rut - chrX 14806808 intron rut - chrX 14806886 intron rut - chrX_21_14805001 chrX_14805001 EF39_1-HE 3603 chrX 14811771 14811817 chrX 14811873 14811919 15 102 6.0 6.5 6.2 2.1 148 chrX 14811771 intron rut - chrX 14811845 intron rut - chrX 14811919 intron rut - chrX_15_14810001 chrX_14810001 EF39_1-HE 3604 chrX 14818736 14818793 chrX 14823966 14824023 copia 9 5228 3.5 3.0 3.2 2.1 5287 chrX 14818736 intron rut - chrX 14821380 intron rut - chrX 14824023 intron rut - chrX_9_14820001 chrX_14820001 EF39_1-HE 3605 chrX 14866508 14866572 chrX 14866612 14866677 8 104 2.5 1.0 1.8 2.9 169 chrX 14866508 intron,intron Flo2 +,CG9518 - chrX 14866592 intron,intron Flo2 +,CG9518 - chrX 14866677 intron,intron Flo2 +,CG9518 - chrX_8_14865001 chrX_14865001 EF39_1-HE 3606 chrX 14884815 14884870 chrX 14884917 14884973 12 103 3.0 5.5 4.2 2.3 158 chrX 14884815 intron Flo2 + chrX 14884894 intron Flo2 + chrX 14884973 intron Flo2 + chrX_12_14880001 chrX_14880001 EF39_1-HE 3607 chrX 14936822 14936891 chrX 14946115 14946194 roo 6 9298 0.5 0.0 0.2 5.0 9372 chrX 14936822 intron pdgy - chrX 14941508 intron pdgy - chrX 14946194 intron pdgy - chrX_6_14940001 chrX_14940001 EF39_1-HE 3608 chrX 14966017 14966071 chrX 14966152 14966206 31 134 7.0 7.5 7.2 3.8 189 chrX 14966017 intron eag + chrX 14966112 intron eag + chrX 14966206 intron eag + chrX_31_14965001 chrX_14965001 EF39_1-HE 3609 chrX 14970195 14970250 chrX 14970303 14970353 11 104 5.5 5.5 5.5 1.7 158 chrX 14970195 intron eag + chrX 14970274 intron eag + chrX 14970353 intron eag + chrX_11_14970001 chrX_14970001 EF39_1-HE 3610 chrX 14970640 14970694 chrX 14970744 14970798 17 104 3.0 2.5 2.8 4.5 158 chrX 14970640 intron eag + chrX 14970719 intron eag + chrX 14970798 intron eag + chrX_17_14970001 chrX_14970001 EF39_1-HE 3611 chrX 14981704 14981739 chrX 14981809 14981844 13 105 10.5 8.0 9.2 1.3 140 chrX 14981704 intron eag + chrX 14981774 intron eag + chrX 14981844 intron eag + chrX_13_14980001 chrX_14980001 EF39_1-HE 3612 chrX 14995119 14995155 chrX 14995226 14995262 22 106 25.0 7.5 16.2 1.3 143 chrX 14995119 intron eag + chrX 14995190 intron eag + chrX 14995262 intron eag + chrX_22_14995001 chrX_14995001 EF39_1-HE 3613 chrX 15024213 15024240 chrX 15024323 15024350 6 110 2.5 2.5 2.5 1.7 137 chrX 15024213 intron hiw - chrX 15024282 intron hiw - chrX 15024350 intron hiw - chrX_6_15020001 chrX_15020001 EF39_1-HE 3614 chrX 15029478 15029511 chrX 15029585 15029618 13 106 4.0 4.5 4.2 2.5 140 chrX 15029478 intron,intron hiw -,be + chrX 15029548 intron,intron hiw -,be + chrX 15029618 intron,intron hiw -,be + chrX_13_15025001 chrX_15025001 EF39_1-HE 3615 chrX 15090977 15091030 chrX 15091087 15091142 18 112 5.0 9.5 7.2 2.2 165 chrX 15090977 intron Rab3-GEF + chrX 15091060 intron Rab3-GEF + chrX 15091142 intron Rab3-GEF + chrX_18_15090001 chrX_15090001 EF39_1-HE 3616 chrX 15127211 15127238 chrX 15127329 15127356 6 118 0.5 4.5 2.5 1.7 145 chrX 15127211 intron drd + chrX 15127284 intron drd + chrX 15127356 intron drd + chrX_6_15125001 chrX_15125001 EF39_1-HE 3617 chrX 15190469 15190483 chrX 15190590 15190604 4 121 0.0 0.5 0.2 3.3 135 chrX 15190469 intergenic not near genes chrX 15190536 intergenic not near genes chrX 15190604 intergenic not near genes chrX_4_15190001 chrX_15190001 EF39_1-HE 3618 chrX 15229289 15229341 chrX 15229392 15229444 6 103 6.5 2.0 4.2 1.2 155 chrX 15229289 exon CG9101 - chrX 15229366 intron CG9101 - chrX 15229444 exon CG9101 - chrX_6_15225001 chrX_15225001 EF39_1-HE 3619 chrX 15247231 15247289 chrX 15247343 15247400 8 111 2.0 1.5 1.8 2.9 169 chrX 15247231 intergenic not near genes chrX 15247316 intergenic not near genes chrX 15247400 intergenic not near genes chrX_8_15245001 chrX_15245001 EF39_1-HE 3620 chrX 15248245 15248290 chrX 15248343 15248391 12 101 5.5 5.0 5.2 1.9 146 chrX 15248245 intergenic not near genes chrX 15248318 intergenic not near genes chrX 15248391 intergenic not near genes chrX_12_15245001 chrX_15245001 EF39_1-HE 3621 chrX 15261108 15261165 chrX 15261230 15261280 21 115 1.0 5.0 3.0 5.2 172 chrX 15261108 intergenic not near genes chrX 15261194 intergenic not near genes chrX 15261280 intergenic not near genes chrX_21_15260001 chrX_15260001 EF39_1-HE 3622 chrX 15273688 15273738 chrX 15274881 15274931 1360 12 1192 1.0 6.0 3.5 2.7 1243 chrX 15273688 intergenic not near genes chrX 15274310 intergenic not near genes chrX 15274931 intergenic not near genes chrX_12_15270001 chrX_15270001 EF39_1-HE 3623 chrX 15276637 15276689 chrX 15276757 15276809 16 118 4.0 2.5 3.2 3.8 172 chrX 15276637 intergenic not near genes chrX 15276723 intergenic not near genes chrX 15276809 intergenic not near genes chrX_16_15275001 chrX_15275001 EF39_1-HE 3624 chrX 15282444 15282504 chrX 15282600 15282658 5 154 1.0 1.5 1.2 2.3 214 chrX 15282444 intergenic not near genes chrX 15282551 intergenic not near genes chrX 15282658 intergenic not near genes chrX_5_15280001 chrX_15280001 EF39_1-HE 3625 chrX 15284458 15284464 chrX 15284563 15284569 5 105 3.0 0.0 1.5 2.0 111 chrX 15284458 intergenic not near genes chrX 15284514 intergenic not near genes chrX 15284569 intergenic not near genes chrX_5_15280001 chrX_15280001 EF39_1-HE 3626 chrX 15306693 15306712 chrX 15306797 15306816 5 104 10.0 4.5 7.2 0.6 123 chrX 15306693 intron gce + chrX 15306754 intron gce + chrX 15306816 intron gce + chrX_5_15305001 chrX_15305001 EF39_1-HE 3627 chrX 15369806 15369860 chrX 15369915 15369969 18 109 6.5 9.0 7.8 2.0 163 chrX 15369806 intron acj6 - chrX 15369888 intron acj6 - chrX 15369969 intron acj6 - chrX_18_15365001 chrX_15365001 EF39_1-HE 3628 chrX 15413032 15413044 chrX 15417360 15417368 Juan 6 4327 18.0 9.0 13.5 0.4 4336 chrX 15413032 intron Cngl - chrX 15415200 intron Cngl - chrX 15417368 intron Cngl - chrX_6_15415001 chrX_15415001 EF39_1-HE 3629 chrX 15413046 15413084 chrX 15417352 15417412 Juan 20 4327 9.0 7.5 8.2 2.2 4366 chrX 15413046 intron Cngl - chrX 15415229 intron Cngl - chrX 15417412 intron Cngl - chrX_20_15415001 chrX_15415001 EF39_1-HE 3630 chrX 15421898 15421947 chrX 15423431 15423484 pogo 18 1536 7.0 2.0 4.5 3.3 1586 chrX 15421898 intron Cngl - chrX 15422691 intron Cngl - chrX 15423484 intron Cngl - chrX_18_15420001 chrX_15420001 EF39_1-HE 3631 chrX 15425364 15425371 chrX 15425467 15425474 7 103 15.0 16.0 15.5 0.4 110 chrX 15425364 intron Cngl - chrX 15425419 intron Cngl - chrX 15425474 intron Cngl - chrX_7_15425001 chrX_15425001 EF39_1-HE 3632 chrX 15435689 15435702 chrX 15436148 15436161 rover 9 459 0.0 12.5 6.2 1.2 472 chrX 15435689 intron Cngl - chrX 15435925 intron Cngl - chrX 15436161 intron Cngl - chrX_9_15435001 chrX_15435001 EF39_1-HE 3633 chrX 15497575 15497618 chrX 15497691 15497734 13 116 2.0 5.5 3.8 2.7 159 chrX 15497575 intron,3` UTR Gmap +,CR44888 - chrX 15497654 intron,3` UTR Gmap +,CR44888 - chrX 15497734 intron,3` UTR Gmap +,CR44888 - chrX_13_15495001 chrX_15495001 EF39_1-HE 3634 chrX 15510581 15510623 chrX 15512891 15512933 14 2310 15.0 20.5 17.8 0.7 2352 chrX 15510581 3` UTR Gmap + chrX 15511757 3` UTR Ac13E - chrX 15512933 exon Ac13E - chrX_14_15510001 chrX_15510001 EF39_1-HE 3635 chrX 15654473 15654530 chrX 15654577 15654633 17 103 1.5 2.0 1.8 6.1 160 chrX 15654473 intergenic not near genes chrX 15654553 intergenic not near genes chrX 15654633 intergenic not near genes chrX_17_15650001 chrX_15650001 EF39_1-HE 3636 chrX 15696648 15696655 chrX 15696818 15696824 4 170 5.0 5.5 5.2 0.6 176 chrX 15696648 intergenic not near genes chrX 15696736 intergenic not near genes chrX 15696824 intergenic not near genes chrX_4_15695001 chrX_15695001 EF39_1-HE 3637 chrX 15696656 15696685 chrX 15696816 15696855 16 169 2.5 5.0 3.8 3.3 199 chrX 15696656 intergenic not near genes chrX 15696756 intergenic not near genes chrX 15696855 intergenic not near genes chrX_16_15695001 chrX_15695001 EF39_1-HE 3638 chrX 15809033 15809052 chrX 15809134 15809159 6 104 1.5 4.0 2.8 1.6 126 chrX 15809033 intron sd + chrX 15809096 intron sd + chrX 15809159 intron sd + chrX_6_15805001 chrX_15805001 EF39_1-HE 3639 chrX 15816434 15816494 chrX 15816541 15816598 10 106 1.0 1.5 1.2 4.5 164 chrX 15816434 intron sd + chrX 15816516 intron sd + chrX 15816598 intron sd + chrX_10_15815001 chrX_15815001 EF39_1-HE 3640 chrX 15898413 15898461 chrX 15898593 15898642 16 180 2.0 7.0 4.5 2.9 229 chrX 15898413 intron shi + chrX 15898528 intron shi + chrX 15898642 intron shi + chrX_16_15895001 chrX_15895001 EF39_1-HE 3641 chrX 15939244 15939302 chrX 15939355 15939413 6 111 3.0 3.0 3.0 1.5 169 chrX 15939244 intron Stim - chrX 15939328 intron Stim - chrX 15939413 intron Stim - chrX_6_15935001 chrX_15935001 EF39_1-HE 3642 chrX 15959516 15959557 chrX 15959630 15959671 17 114 2.0 2.0 2.0 5.7 155 chrX 15959516 intron mmd - chrX 15959594 intron mmd - chrX 15959671 intron mmd - chrX_17_15955001 chrX_15955001 EF39_1-HE 3643 chrX 15970888 15970897 chrX 15970990 15970993 7 101 7.5 3.0 5.2 1.1 105 chrX 15970888 intron mmd - chrX 15970940 intron mmd - chrX 15970993 intron mmd - chrX_7_15970001 chrX_15970001 EF39_1-HE 3644 chrX 16100532 16100591 chrX 16100637 16100697 8 105 3.0 2.5 2.8 2.1 165 chrX 16100532 intron,intron CG42353 -,CG42354 - chrX 16100614 intron,intron CG42353 -,CG42354 - chrX 16100697 intron,intron CG42353 -,CG42354 - chrX_8_16100001 chrX_16100001 EF39_1-HE 3645 chrX 16166280 16166295 chrX 16166396 16166411 4 116 5.0 0.0 2.5 1.1 131 chrX 16166280 intergenic not near genes chrX 16166346 intergenic not near genes chrX 16166411 intergenic not near genes chrX_4_16165001 chrX_16165001 EF39_1-HE 3646 chrX 16169603 16169660 chrX 16169709 16169766 18 106 3.0 2.5 2.8 4.7 163 chrX 16169603 intergenic not near genes chrX 16169684 intergenic not near genes chrX 16169766 intergenic not near genes chrX_18_16165001 chrX_16165001 EF39_1-HE 3647 chrX 16193908 16193953 chrX 16194023 16194068 10 115 0.0 6.0 3.0 2.5 160 chrX 16193908 intergenic not near genes chrX 16193988 intergenic not near genes chrX 16194068 intergenic not near genes chrX_10_16190001 chrX_16190001 EF39_1-HE 3648 chrX 16221103 16221141 chrX 16221205 16221243 11 102 10.0 7.5 8.8 1.1 140 chrX 16221103 intergenic not near genes chrX 16221173 intergenic not near genes chrX 16221243 intergenic not near genes chrX_11_16220001 chrX_16220001 EF39_1-HE 3649 chrX 16222764 16222810 chrX 16231141 16231186 roo 8 8377 0.5 5.5 3.0 2.0 8422 chrX 16222764 intergenic not near genes chrX 16226975 intergenic not near genes chrX 16231186 intergenic not near genes chrX_8_16225001 chrX_16225001 EF39_1-HE 3650 chrX 16237639 16237650 chrX 16237751 16237762 8 111 2.0 0.5 1.2 3.6 123 chrX 16237639 intergenic not near genes chrX 16237700 intergenic not near genes chrX 16237762 intergenic not near genes chrX_8_16235001 chrX_16235001 EF39_1-HE 3651 chrX 16307214 16307260 chrX 16312579 16312624 9 5364 30.0 33.0 31.5 0.3 5410 chrX 16307214 3` UTR,exon,5` UTR CG3679 +,CG9914 -,CR45485 + chrX 16309919 3` UTR CG9915 - chrX 16312624 exon CG9915 - chrX_9_16305001 chrX_16305001 EF39_1-HE 3652 chrX 16329318 16329366 chrX 16329435 16329513 10 128 4.0 0.0 2.0 3.3 195 chrX 16329318 exon CG9919 - chrX 16329416 intron CG9919 - chrX 16329513 intron CG9919 - chrX_10_16325001 chrX_16325001 EF39_1-HE 3653 chrX 16340659 16340696 chrX 16349840 16349879 roo 4 9182 0.0 5.0 2.5 1.1 9220 chrX 16340659 intergenic Dsp1 + chrX 16345269 intergenic not near genes chrX 16349879 intergenic sl + chrX_4_16345001 chrX_16345001 EF39_1-HE 3654 chrX 16356500 16356544 chrX 16356644 16356688 12 144 0.5 2.5 1.5 4.8 188 chrX 16356500 intergenic sl +,U2af50 - chrX 16356594 intergenic U2af50 -,sl + chrX 16356688 intergenic U2af50 -,sl + chrX_12_16355001 chrX_16355001 EF39_1-HE 3655 chrX 16362920 16362970 chrX 16363037 16363087 8 117 2.0 1.0 1.5 3.2 167 chrX 16362920 intron nonA + chrX 16363004 intron nonA + chrX 16363087 intron nonA + chrX_8_16360001 chrX_16360001 EF39_1-HE 3656 chrX 16365749 16365795 chrX 16365856 16365902 9 107 4.0 4.0 4.0 1.8 153 chrX 16365749 intron nonA + chrX 16365826 intron nonA + chrX 16365902 intron nonA + chrX_9_16365001 chrX_16365001 EF39_1-HE 3657 chrX 16428106 16428140 chrX 16428221 16428255 9 115 3.0 4.5 3.8 1.9 149 chrX 16428106 intron hang + chrX 16428180 intron hang + chrX 16428255 intron hang + chrX_9_16425001 chrX_16425001 EF39_1-HE 3658 chrX 16450588 16450601 chrX 16450893 16450906 8 305 6.0 2.5 4.2 1.5 318 chrX 16450588 intron Rbp2 + chrX 16450747 intron Rbp2 + chrX 16450906 intron Rbp2 + chrX_8_16450001 chrX_16450001 EF39_1-HE 3659 chrX 16490750 16490804 chrX 16490854 16490907 11 103 6.5 5.0 5.8 1.6 157 chrX 16490750 intron para - chrX 16490828 intron para - chrX 16490907 intron para - chrX_11_16490001 chrX_16490001 EF39_1-HE 3660 chrX 16492620 16492673 chrX 16498223 16498276 mdg3 29 5601 4.0 6.5 5.2 4.7 5656 chrX 16492620 intron para - chrX 16495448 intron para - chrX 16498276 exon para - chrX_29_16495001 chrX_16495001 EF39_1-HE 3661 chrX 16505842 16505871 chrX 16505950 16505979 22 108 19.0 19.5 19.2 1.1 137 chrX 16505842 intron para - chrX 16505910 intron para - chrX 16505979 exon para - chrX_22_16505001 chrX_16505001 EF39_1-HE 3662 chrX 16678048 16678109 chrX 16678153 16678214 11 105 1.0 0.5 0.8 6.1 166 chrX 16678048 intergenic CG13010 - chrX 16678131 intergenic CG13010 - chrX 16678214 intergenic CG13010 - chrX_11_16675001 chrX_16675001 EF39_1-HE 3663 chrX 16689607 16689651 chrX 16689719 16689763 10 112 6.0 3.0 4.5 1.8 156 chrX 16689607 intron Sep4 - chrX 16689685 intron Sep4 - chrX 16689763 intron Sep4 - chrX_10_16685001 chrX_16685001 EF39_1-HE 3664 chrX 16690433 16690472 chrX 16690540 16690577 6 105 2.5 3.0 2.8 1.6 144 chrX 16690433 intron Sep4 - chrX 16690505 intron Sep4 - chrX 16690577 intron Sep4 - chrX_6_16690001 chrX_16690001 EF39_1-HE 3665 chrX 16691093 16691114 chrX 16691318 16691339 5 225 3.5 0.0 1.8 1.8 246 chrX 16691093 intron Sep4 - chrX 16691216 intron Sep4 - chrX 16691339 intron Sep4 - chrX_5_16690001 chrX_16690001 EF39_1-HE 3666 chrX 16700516 16700558 chrX 16700622 16700666 10 105 3.0 3.5 3.2 2.4 150 chrX 16700516 intron,3` UTR CG4678 +,spheroide - chrX 16700591 intron,3` UTR CG4678 +,spheroide - chrX 16700666 intron,3` UTR CG4678 +,spheroide - chrX_10_16700001 chrX_16700001 EF39_1-HE 3667 chrX 16727162 16727183 chrX 16727265 16727286 5 103 1.5 5.5 3.5 1.1 124 chrX 16727162 intergenic CG9634 -,CG32572 + chrX 16727224 intergenic CG9634 -,CG32572 + chrX 16727286 intergenic CG9634 -,CG32572 + chrX_5_16725001 chrX_16725001 EF39_1-HE 3668 chrX 16776787 16776831 chrX 16776890 16776933 17 102 12.5 8.0 10.2 1.5 146 chrX 16776787 intron if - chrX 16776860 intron if - chrX 16776933 intron if - chrX_17_16775001 chrX_16775001 EF39_1-HE 3669 chrX 16830462 16830510 chrX 16830567 16830615 21 105 4.5 6.5 5.5 3.2 153 chrX 16830462 intron CG13004 - chrX 16830538 intron CG13004 - chrX 16830615 intron CG13004 - chrX_21_16830001 chrX_16830001 EF39_1-HE 3670 chrX 16833178 16833214 chrX 16833289 16833325 14 111 10.5 4.0 7.2 1.7 147 chrX 16833178 intron CG13004 - chrX 16833252 intron CG13004 - chrX 16833325 intron CG13004 - chrX_14_16830001 chrX_16830001 EF39_1-HE 3671 chrX 16838550 16838573 chrX 16838660 16838685 7 111 6.0 4.0 5.0 1.2 135 chrX 16838550 3` UTR RSG7 - chrX 16838618 3` UTR RSG7 - chrX 16838685 3` UTR RSG7 - chrX_7_16835001 chrX_16835001 EF39_1-HE 3672 chrX 16879271 16879279 chrX 16879381 16879389 4 110 7.0 0.0 3.5 0.9 118 chrX 16879271 intergenic not near genes chrX 16879330 intergenic not near genes chrX 16879389 intergenic not near genes chrX_4_16875001 chrX_16875001 EF39_1-HE 3673 chrX 16897351 16897370 chrX 16897454 16897473 4 103 0.5 8.5 4.5 0.7 122 chrX 16897351 intergenic CG33252 - chrX 16897412 intergenic CG33252 - chrX 16897473 intergenic CG33252 - chrX_4_16895001 chrX_16895001 EF39_1-HE 3674 chrX 16936002 16936027 chrX 16936446 16936469 jockey 4 442 2.5 4.0 3.2 1.0 467 chrX 16936002 intron CG4928 + chrX 16936236 intron CG4928 + chrX 16936469 intron CG4928 + chrX_4_16935001 chrX_16935001 EF39_1-HE 3675 chrX 16948657 16948690 chrX 16948760 16948793 8 103 4.0 2.5 3.2 1.9 136 chrX 16948657 intron RhoGAP15B + chrX 16948725 intron RhoGAP15B + chrX 16948793 intron RhoGAP15B + chrX_8_16945001 chrX_16945001 EF39_1-HE 3676 chrX 17011941 17011995 chrX 17012050 17012104 16 108 4.5 3.0 3.8 3.3 163 chrX 17011941 intron CG45002 - chrX 17012022 intron CG45002 - chrX 17012104 intron CG45002 - chrX_16_17010001 chrX_17010001 EF39_1-HE 3677 chrX 17044736 17044792 chrX 17045403 17045458 13 667 4.0 2.0 3.0 3.2 722 chrX 17044736 intron CG45002 - chrX 17045097 intron CG45002 - chrX 17045458 intron CG45002 - chrX_13_17045001 chrX_17045001 EF39_1-HE 3678 chrX 17063157 17063208 chrX 17063265 17063321 18 113 2.5 3.5 3.0 4.5 164 chrX 17063157 intron CG45002 - chrX 17063239 intron CG45002 - chrX 17063321 intron CG45002 - chrX_18_17060001 chrX_17060001 EF39_1-HE 3679 chrX 17126080 17126117 chrX 17126188 17126225 4 108 4.0 2.5 3.2 1.0 145 chrX 17126080 exon CG5004 + chrX 17126152 intron CG5004 + chrX 17126225 intron CG5004 + chrX_4_17125001 chrX_17125001 EF39_1-HE 3680 chrX 17195195 17195230 chrX 17200306 17200341 flea 9 5111 4.0 3.5 3.8 1.9 5146 chrX 17195195 3` UTR baz + chrX 17197768 3` UTR baz + chrX 17200341 3` UTR baz + chrX_9_17195001 chrX_17195001 EF39_1-HE 3681 chrX 17205823 17205853 chrX 17205939 17205969 10 116 3.0 4.5 3.8 2.1 146 chrX 17205823 intergenic not near genes chrX 17205896 intergenic not near genes chrX 17205969 intergenic CG32564 + chrX_10_17205001 chrX_17205001 EF39_1-HE 3682 chrX 17229932 17229935 chrX 17230061 17230064 4 129 9.5 3.0 6.2 0.6 132 chrX 17229932 intergenic CG10597 - chrX 17229998 intergenic CG10597 - chrX 17230064 intergenic CG10597 - chrX_4_17225001 chrX_17225001 EF39_1-HE 3683 chrX 17236843 17236893 chrX 17236950 17237000 14 107 2.5 3.5 3.0 3.5 157 chrX 17236843 intron f + chrX 17236922 intron f + chrX 17237000 intron f + chrX_14_17235001 chrX_17235001 EF39_1-HE 3684 chrX 17289955 17290008 chrX 17290066 17290120 10 112 1.5 2.5 2.0 3.3 165 chrX 17289955 intron,intron CG5445 +,Fim - chrX 17290038 intron,intron CG5445 +,Fim - chrX 17290120 intron,intron CG5445 +,Fim - chrX_10_17290001 chrX_17290001 EF39_1-HE 3685 chrX 17313860 17313908 chrX 17313967 17314015 19 107 3.5 1.5 2.5 5.4 155 chrX 17313860 intergenic not near genes chrX 17313938 intergenic not near genes chrX 17314015 intergenic not near genes chrX_19_17310001 chrX_17310001 EF39_1-HE 3686 chrX 17316343 17316377 chrX 17316453 17316487 9 110 5.0 0.0 2.5 2.6 144 chrX 17316343 intron B-H2 + chrX 17316415 intron B-H2 + chrX 17316487 intron B-H2 + chrX_9_17315001 chrX_17315001 EF39_1-HE 3687 chrX 17324672 17324688 chrX 17324819 17324835 6 147 9.0 0.0 4.5 1.1 163 chrX 17324672 intergenic B-H2 + chrX 17324754 intergenic not near genes chrX 17324835 intergenic not near genes chrX_6_17320001 chrX_17320001 EF39_1-HE 3688 chrX 17335147 17335190 chrX 17335252 17335295 10 105 5.0 5.5 5.2 1.6 148 chrX 17335147 intergenic not near genes chrX 17335221 intergenic not near genes chrX 17335295 intergenic not near genes chrX_10_17335001 chrX_17335001 EF39_1-HE 3689 chrX 17349845 17349877 chrX 17350063 17350095 13 217 3.5 2.5 3.0 3.2 250 chrX 17349845 intergenic not near genes chrX 17349970 intergenic not near genes chrX 17350095 intergenic not near genes chrX_13_17345001 chrX_17345001 EF39_1-HE 3690 chrX 17391022 17391049 chrX 17391132 17391159 9 110 6.5 0.0 3.2 2.1 137 chrX 17391022 intergenic not near genes chrX 17391090 intergenic not near genes chrX 17391159 intergenic not near genes chrX_9_17390001 chrX_17390001 EF39_1-HE 3691 chrX 17427021 17427073 chrX 17427134 17427186 20 113 3.5 6.0 4.8 3.4 165 chrX 17427021 intron,intron CG12994 -,CG5613 + chrX 17427104 intron,intron CG12994 -,CG5613 + chrX 17427186 intron,intron CG12994 -,CG5613 + chrX_20_17425001 chrX_17425001 EF39_1-HE 3692 chrX 17479919 17479936 chrX 17480030 17480054 5 117 5.0 7.0 6.0 0.7 135 chrX 17479919 intron CG43658 - chrX 17479986 intron CG43658 - chrX 17480054 intron CG43658 - chrX_5_17475001 chrX_17475001 EF39_1-HE 3693 chrX 17501359 17501385 chrX 17501472 17501498 8 113 9.5 4.5 7.0 1.0 139 chrX 17501359 intron CG43658 - chrX 17501428 intron CG43658 - chrX 17501498 intron CG43658 - chrX_8_17500001 chrX_17500001 EF39_1-HE 3694 chrX 17523645 17523660 chrX 17523747 17523762 8 102 7.0 0.0 3.5 1.8 117 chrX 17523645 intron CG43658 - chrX 17523704 intron CG43658 - chrX 17523762 intron CG43658 - chrX_8_17520001 chrX_17520001 EF39_1-HE 3695 chrX 17530684 17530733 chrX 17530811 17530860 11 127 3.0 3.5 3.2 2.6 176 chrX 17530684 intron CG43658 - chrX 17530772 intron CG43658 - chrX 17530860 intron CG43658 - chrX_11_17530001 chrX_17530001 EF39_1-HE 3696 chrX 17552196 17552251 chrX 17552553 17552608 19 356 4.5 2.5 3.5 4.2 412 chrX 17552196 intron CG43658 - chrX 17552402 intron CG43658 - chrX 17552608 intron CG43658 - chrX_19_17550001 chrX_17550001 EF39_1-HE 3697 chrX 17675101 17675145 chrX 17675294 17675338 10 193 0.0 2.5 1.2 4.5 237 chrX 17675101 intron chas - chrX 17675220 intron chas - chrX 17675338 exon chas - chrX_10_17675001 chrX_17675001 EF39_1-HE 3698 chrX 17685448 17685473 chrX 17685551 17685582 8 108 5.5 4.0 4.8 1.4 134 chrX 17685448 intron chas - chrX 17685515 intron chas - chrX 17685582 intron chas - chrX_8_17685001 chrX_17685001 EF39_1-HE 3699 chrX 17711346 17711374 chrX 17711458 17711486 7 112 4.0 3.0 3.5 1.6 140 chrX 17711346 intron CG42684 + chrX 17711416 intron CG42684 + chrX 17711486 intron CG42684 + chrX_7_17710001 chrX_17710001 EF39_1-HE 3700 chrX 17741355 17741393 chrX 17741465 17741503 12 110 1.5 5.5 3.5 2.7 148 chrX 17741355 intron CG42684 + chrX 17741429 intron CG42684 + chrX 17741503 intron CG42684 + chrX_12_17740001 chrX_17740001 EF39_1-HE 3701 chrX 17782194 17782238 chrX 17782318 17782362 12 124 2.0 4.0 3.0 3.0 168 chrX 17782194 intergenic not near genes chrX 17782278 intergenic not near genes chrX 17782362 intergenic not near genes chrX_12_17780001 chrX_17780001 EF39_1-HE 3702 chrX 17792929 17792976 chrX 17796253 17796300 flea 12 3324 3.5 3.5 3.5 2.7 3371 chrX 17792929 intron OdsH + chrX 17794614 intron OdsH + chrX 17796300 intron OdsH + chrX_12_17790001 chrX_17790001 EF39_1-HE 3703 chrX 17965691 17965739 chrX 17965794 17965842 4 103 3.0 0.0 1.5 1.6 151 chrX 17965691 intron Sh - chrX 17965766 intron Sh - chrX 17965842 intron Sh - chrX_4_17965001 chrX_17965001 EF39_1-HE 3704 chrX 17978526 17978572 chrX 17978630 17978676 17 102 8.5 10.0 9.2 1.7 150 chrX 17978526 intron Sh - chrX 17978601 intron Sh - chrX 17978676 intron Sh - chrX_17_17975001 chrX_17975001 EF39_1-HE 3705 chrX 17985826 17985875 chrX 17985929 17985978 17 103 3.5 6.0 4.8 2.9 152 chrX 17985826 intron Sh - chrX 17985902 intron Sh - chrX 17985978 intron Sh - chrX_17_17985001 chrX_17985001 EF39_1-HE 3706 chrX 17987888 17987944 chrX 17987994 17988049 21 106 10.0 7.0 8.5 2.2 161 chrX 17987888 intron Sh - chrX 17987968 intron Sh - chrX 17988049 intron Sh - chrX_21_17985001 chrX_17985001 EF39_1-HE 3707 chrX 17999154 17999204 chrX 17999283 17999338 16 133 3.0 5.0 4.0 3.2 184 chrX 17999154 intron Sh - chrX 17999246 intron Sh - chrX 17999338 intron Sh - chrX_16_17995001 chrX_17995001 EF39_1-HE 3708 chrX 18029160 18029184 chrX 18029267 18029291 8 107 3.0 0.0 1.5 3.2 131 chrX 18029160 intron Sh - chrX 18029226 intron Sh - chrX 18029291 intron Sh - chrX_8_18025001 chrX_18025001 EF39_1-HE 3709 chrX 18030133 18030167 chrX 18030287 18030321 10 154 2.0 3.5 2.8 2.6 188 chrX 18030133 intron Sh - chrX 18030227 intron Sh - chrX 18030321 intron Sh - chrX_10_18030001 chrX_18030001 EF39_1-HE 3710 chrX 18122792 18122849 chrX 18122894 18122951 32 101 6.5 2.5 4.5 5.8 159 chrX 18122792 5` UTR CR45606 + chrX 18122872 5` UTR CR45606 + chrX 18122951 intergenic CR45606 + chrX_32_18120001 chrX_18120001 EF39_1-HE 3711 chrX 18145471 18145497 chrX 18145575 18145601 15 104 5.5 3.5 4.5 2.7 130 chrX 18145471 intergenic not near genes chrX 18145536 intergenic not near genes chrX 18145601 intergenic not near genes chrX_15_18145001 chrX_18145001 EF39_1-HE 3712 chrX 18148624 18148647 chrX 18148753 18148772 7 128 0.0 5.0 2.5 2.0 148 chrX 18148624 intergenic not near genes chrX 18148698 intergenic not near genes chrX 18148772 intergenic not near genes chrX_7_18145001 chrX_18145001 EF39_1-HE 3713 chrX 18170434 18170473 chrX 18170605 18170644 11 171 3.0 6.0 4.5 2.0 210 chrX 18170434 3` UTR Frq1 + chrX 18170539 3` UTR Frq1 + chrX 18170644 3` UTR Frq1 + chrX_11_18170001 chrX_18170001 EF39_1-HE 3714 chrX 18177004 18177043 chrX 18177123 18177162 5 119 2.0 0.5 1.2 2.3 158 chrX 18177004 intergenic not near genes chrX 18177083 intergenic not near genes chrX 18177162 intergenic Frq2 + chrX_5_18175001 chrX_18175001 EF39_1-HE 3715 chrX 18194050 18194101 chrX 18194611 18194646 BS 24 560 3.5 10.0 6.8 3.1 596 chrX 18194050 intron Frq2 + chrX 18194348 intron Frq2 + chrX 18194646 intron Frq2 + chrX_24_18190001 chrX_18190001 EF39_1-HE 3716 chrX 18216291 18216339 chrX 18216449 18216497 6 158 4.0 2.5 3.2 1.4 206 chrX 18216291 intron CG33639 - chrX 18216394 intron CG33639 - chrX 18216497 intron CG33639 - chrX_6_18215001 chrX_18215001 EF39_1-HE 3717 chrX 18274603 18274651 chrX 18274932 18274979 9 329 2.0 3.5 2.8 2.4 376 chrX 18274603 intergenic not near genes chrX 18274791 intergenic not near genes chrX 18274979 intergenic not near genes chrX_9_18270001 chrX_18270001 EF39_1-HE 3718 chrX 18286125 18286176 chrX 18286248 18286299 6 123 2.0 1.0 1.5 2.4 174 chrX 18286125 intergenic not near genes chrX 18286212 intergenic not near genes chrX 18286299 intergenic not near genes chrX_6_18285001 chrX_18285001 EF39_1-HE 3719 chrX 18297549 18297565 chrX 18297652 18297670 7 105 3.0 15.5 9.2 0.7 121 chrX 18297549 intergenic not near genes chrX 18297610 intergenic not near genes chrX 18297670 intergenic not near genes chrX_7_18295001 chrX_18295001 EF39_1-HE 3720 chrX 18299624 18299683 chrX 18299750 18299809 12 126 3.0 2.0 2.5 3.4 185 chrX 18299624 intergenic not near genes chrX 18299716 intergenic not near genes chrX 18299809 intergenic not near genes chrX_12_18295001 chrX_18295001 EF39_1-HE 3721 chrX 18320486 18320502 chrX 18320644 18320660 9 157 0.0 9.5 4.8 1.6 174 chrX 18320486 intron CG6023 - chrX 18320573 intron CG6023 - chrX 18320660 intron CG6023 - chrX_9_18320001 chrX_18320001 EF39_1-HE 3722 chrX 18335488 18335503 chrX 18335593 18335609 6 106 7.0 11.5 9.2 0.6 121 chrX 18335488 intron CG6123 - chrX 18335548 intron CG6123 - chrX 18335609 intron CG6123 - chrX_6_18335001 chrX_18335001 EF39_1-HE 3723 chrX 18342763 18342782 chrX 18342880 18342899 8 117 11.5 8.0 9.8 0.7 136 chrX 18342763 intron CG6123 - chrX 18342831 intron CG6123 - chrX 18342899 intron CG6123 - chrX_8_18340001 chrX_18340001 EF39_1-HE 3724 chrX 18344181 18344243 chrX 18344310 18344369 13 127 1.5 0.0 0.8 7.2 188 chrX 18344181 intron CG6123 - chrX 18344275 intron CG6123 - chrX 18344369 intron CG6123 - chrX_13_18340001 chrX_18340001 EF39_1-HE 3725 chrX 18419908 18419910 chrX 18420012 18420014 4 104 8.5 0.0 4.2 0.8 106 chrX 18419908 intergenic not near genes chrX 18419961 intergenic not near genes chrX 18420014 intergenic not near genes chrX_4_18415001 chrX_18415001 EF39_1-HE 3726 chrX 18429479 18429517 chrX 18434816 18434854 Transpac 12 5337 2.0 8.5 5.2 1.9 5375 chrX 18429479 intergenic not near genes chrX 18432166 intergenic not near genes chrX 18434854 intergenic not near genes chrX_12_18430001 chrX_18430001 EF39_1-HE 3727 chrX 18443027 18443031 chrX 18443130 18443133 5 103 0.0 8.5 4.2 1.0 106 chrX 18443027 3` UTR CG32547 - chrX 18443080 3` UTR CG32547 - chrX 18443133 3` UTR CG32547 - chrX_5_18440001 chrX_18440001 EF39_1-HE 3728 chrX 18446446 18446494 chrX 18446557 18446605 10 110 3.0 4.0 3.5 2.2 159 chrX 18446446 intron CG32547 - chrX 18446526 intron CG32547 - chrX 18446605 intron CG32547 - chrX_10_18445001 chrX_18445001 EF39_1-HE 3729 chrX 18454228 18454286 chrX 18454373 18454425 19 144 2.0 4.0 3.0 4.8 197 chrX 18454228 intron CG32547 - chrX 18454326 intron CG32547 - chrX 18454425 intron CG32547 - chrX_19_18450001 chrX_18450001 EF39_1-HE 3730 chrX 18486080 18486130 chrX 18486195 18486245 9 115 5.5 4.5 5.0 1.5 165 chrX 18486080 exon psh - chrX 18486162 intron psh - chrX 18486245 intron psh - chrX_9_18485001 chrX_18485001 EF39_1-HE 3731 chrX 18490256 18490270 chrX 18490542 18490556 6 286 11.0 0.0 5.5 0.9 300 chrX 18490256 intergenic not near genes chrX 18490406 intergenic not near genes chrX 18490556 intergenic not near genes chrX_6_18490001 chrX_18490001 EF39_1-HE 3732 chrX 18524333 18524369 chrX 18524438 18524474 6 105 3.0 2.0 2.5 1.7 141 chrX 18524333 intron Bx + chrX 18524404 intron Bx + chrX 18524474 intron Bx + chrX_6_18520001 chrX_18520001 EF39_1-HE 3733 chrX 18559458 18559502 chrX 18559573 18559617 16 112 5.5 4.5 5.0 2.7 159 chrX 18559458 intron Bx + chrX 18559538 intron Bx + chrX 18559617 intron Bx + chrX_16_18555001 chrX_18555001 EF39_1-HE 3734 chrX 18645000 18645041 chrX 18645124 18645165 11 123 4.0 2.5 3.2 2.6 165 chrX 18645000 intron Rip11 - chrX 18645082 intron Rip11 - chrX 18645165 intron Rip11 - chrX_11_18645001 chrX_18645001 EF39_1-HE 3735 chrX 18680731 18680768 chrX 18680869 18680906 15 137 6.5 3.5 5.0 2.5 175 chrX 18680731 intergenic not near genes chrX 18680818 intergenic not near genes chrX 18680906 intergenic not near genes chrX_15_18680001 chrX_18680001 EF39_1-HE 3736 chrX 18698819 18698877 chrX 18698962 18699020 14 143 4.0 1.5 2.8 3.7 201 chrX 18698819 intergenic not near genes chrX 18698920 intergenic not near genes chrX 18699020 intergenic not near genes chrX_14_18695001 chrX_18695001 EF39_1-HE 3737 chrX 18748502 18748542 chrX 18748608 18748652 11 109 3.5 3.0 3.2 2.6 150 chrX 18748502 intergenic CG12609 - chrX 18748577 intergenic CG12609 - chrX 18748652 intergenic CG12609 - chrX_11_18745001 chrX_18745001 EF39_1-HE 3738 chrX 18767140 18767172 chrX 18767297 18767329 12 156 4.0 3.5 3.8 2.5 189 chrX 18767140 intron CCKLR-17D3 - chrX 18767234 intron CCKLR-17D3 - chrX 18767329 intron CCKLR-17D3 - chrX_12_18765001 chrX_18765001 EF39_1-HE 3739 chrX 18912831 18912884 chrX 18912943 18912996 10 112 2.0 1.0 1.5 4.0 165 chrX 18912831 intergenic CR44708 + chrX 18912914 intergenic CR44708 + chrX 18912996 intergenic CR44708 + chrX_10_18910001 chrX_18910001 EF39_1-HE 3740 chrX 18922775 18922815 chrX 18923028 18923068 6 253 5.5 4.5 5.0 1.0 293 chrX 18922775 intergenic not near genes chrX 18922922 intergenic not near genes chrX 18923068 intergenic not near genes chrX_6_18920001 chrX_18920001 EF39_1-HE 3741 chrX 18957059 18957095 chrX 18965748 18965752 roo 9 8685 0.0 3.5 1.8 3.2 8693 chrX 18957059 intron CG43759 + chrX 18961406 intron CG43759 + chrX 18965752 intron CG43759 + chrX_9_18960001 chrX_18960001 EF39_1-HE 3742 chrX 18967445 18967490 chrX 18967550 18967595 16 105 3.5 5.0 4.2 3.1 150 chrX 18967445 intron CG43759 + chrX 18967520 intron CG43759 + chrX 18967595 intron CG43759 + chrX_16_18965001 chrX_18965001 EF39_1-HE 3743 chrX 18986862 18986897 chrX 18986981 18987016 12 119 5.0 3.5 4.2 2.3 154 chrX 18986862 intron CG43759 + chrX 18986939 intron CG43759 + chrX 18987016 intron CG43759 + chrX_12_18985001 chrX_18985001 EF39_1-HE 3744 chrX 18988282 18988511 chrX 18988465 18988624 10 155 0.0 0.0 0.0 10.0 342 chrX 18988282 intron CG43759 + chrX 18988453 intron CG43759 + chrX 18988624 intron CG43759 + chrX_10_18985001 chrX_18985001 EF39_1-HE 3745 chrX 19004764 19004820 chrX 19005072 19005125 7 303 0.0 1.5 0.8 3.9 361 chrX 19004764 intron CG43759 + chrX 19004944 intron CG43759 + chrX 19005125 intron CG43759 + chrX_7_19000001 chrX_19000001 EF39_1-HE 3746 chrX 19014336 19014374 chrX 19014441 19014479 6 105 3.5 4.0 3.8 1.2 143 chrX 19014336 intron CG43759 + chrX 19014408 intron CG43759 + chrX 19014479 intron CG43759 + chrX_6_19010001 chrX_19010001 EF39_1-HE 3747 chrX 19020514 19020570 chrX 19020643 19020699 18 129 3.0 8.0 5.5 2.8 185 chrX 19020514 intron CG43759 + chrX 19020606 intron CG43759 + chrX 19020699 intron CG43759 + chrX_18_19020001 chrX_19020001 EF39_1-HE 3748 chrX 19027589 19027609 chrX 19027698 19027718 7 109 0.0 3.5 1.8 2.5 129 chrX 19027589 3` UTR CG43759 + chrX 19027654 3` UTR CG43759 + chrX 19027718 3` UTR CG43759 + chrX_7_19025001 chrX_19025001 EF39_1-HE 3749 chrX 19044074 19044126 chrX 19044178 19044237 16 104 2.5 3.0 2.8 4.2 163 chrX 19044074 intergenic not near genes chrX 19044156 intergenic not near genes chrX 19044237 intergenic not near genes chrX_16_19040001 chrX_19040001 EF39_1-HE 3750 chrX 19060377 19060428 chrX 19065187 19065238 Doc 15 4810 8.5 4.0 6.2 2.1 4861 chrX 19060377 intron CG14190 + chrX 19062808 intron CG14190 + chrX 19065238 intron CG14190 + chrX_15_19060001 chrX_19060001 EF39_1-HE 3751 chrX 19084084 19084126 chrX 19084230 19084272 15 146 3.0 6.5 4.8 2.6 188 chrX 19084084 intergenic CR45503 + chrX 19084178 intergenic CR45503 + chrX 19084272 intergenic CR45503 + chrX_15_19080001 chrX_19080001 EF39_1-HE 3752 chrX 19098738 19098774 chrX 19098836 19098878 11 103 3.0 4.5 3.8 2.3 140 chrX 19098738 intergenic not near genes chrX 19098808 intergenic not near genes chrX 19098878 intergenic not near genes chrX_11_19095001 chrX_19095001 EF39_1-HE 3753 chrX 19125665 19125711 chrX 19125819 19125866 31 155 9.0 5.5 7.2 3.8 201 chrX 19125665 intron tgy - chrX 19125766 intron tgy - chrX 19125866 intron tgy - chrX_31_19125001 chrX_19125001 EF39_1-HE 3754 chrX 19127531 19127589 chrX 19127645 19127703 27 113 7.5 5.5 6.5 3.6 172 chrX 19127531 intergenic tgy - chrX 19127617 intergenic tgy - chrX 19127703 intergenic tgy - chrX_27_19125001 chrX_19125001 EF39_1-HE 3755 chrX 19136538 19136559 chrX 19143483 19143504 412 5 6945 4.5 0.0 2.2 1.6 6966 chrX 19136538 intergenic not near genes chrX 19140021 intergenic not near genes chrX 19143504 3` UTR RhoGAP18B - chrX_5_19140001 chrX_19140001 EF39_1-HE 3756 chrX 19187489 19187542 chrX 19187597 19187650 13 108 3.0 5.0 4.0 2.6 161 chrX 19187489 intergenic CG33253 + chrX 19187570 intergenic CG33253 +,Mec2 + chrX 19187650 intergenic CG33253 +,Mec2 + chrX_13_19185001 chrX_19185001 EF39_1-HE 3757 chrX 19223041 19223094 chrX 19223286 19223339 28 245 5.0 4.5 4.8 4.8 298 chrX 19223041 intron CG7884 + chrX 19223190 intron CG7884 + chrX 19223339 intron CG7884 + chrX_28_19220001 chrX_19220001 EF39_1-HE 3758 chrX 19223355 19223362 chrX 19223538 19223545 5 183 8.0 0.0 4.0 1.0 190 chrX 19223355 intron CG7884 + chrX 19223450 intron CG7884 + chrX 19223545 intron CG7884 + chrX_5_19220001 chrX_19220001 EF39_1-HE 3759 chrX 19250178 19250218 chrX 19250284 19250324 13 106 5.0 1.5 3.2 3.1 146 chrX 19250178 exon Hs3st-B + chrX 19250251 intron Hs3st-B + chrX 19250324 intron Hs3st-B + chrX_13_19250001 chrX_19250001 EF39_1-HE 3760 chrX 19265958 19265999 chrX 19266061 19266103 6 104 6.5 1.5 4.0 1.2 145 chrX 19265958 intron Vav + chrX 19266030 intron Vav + chrX 19266103 intron Vav + chrX_6_19265001 chrX_19265001 EF39_1-HE 3761 chrX 19316439 19316475 chrX 19316549 19316585 12 110 6.5 1.0 3.8 2.5 146 chrX 19316439 intron out - chrX 19316512 intron out - chrX 19316585 intron out - chrX_12_19315001 chrX_19315001 EF39_1-HE 3762 chrX 19317448 19317499 chrX 19317560 19317611 19 112 6.5 5.5 6.0 2.7 163 chrX 19317448 intron out - chrX 19317530 intron out - chrX 19317611 intron out - chrX_19_19315001 chrX_19315001 EF39_1-HE 3763 chrX 19356964 19357013 chrX 19358430 19358480 NOF 21 1467 6.5 7.5 7.0 2.6 1516 chrX 19356964 intron kek5 + chrX 19357722 intron kek5 + chrX 19358480 intron kek5 + chrX_21_19355001 chrX_19355001 EF39_1-HE 3764 chrX 19380144 19380186 chrX 19380412 19380454 pogo 16 268 3.5 9.0 6.2 2.2 310 chrX 19380144 intron kek5 + chrX 19380299 intron kek5 + chrX 19380454 intron kek5 + chrX_16_19380001 chrX_19380001 EF39_1-HE 3765 chrX 19386233 19386285 chrX 19386337 19386389 10 104 5.0 3.0 4.0 2.0 156 chrX 19386233 intron kek5 + chrX 19386311 intron kek5 + chrX 19386389 intron kek5 + chrX_10_19385001 chrX_19385001 EF39_1-HE 3766 chrX 19406605 19406661 chrX 19406713 19406769 32 108 5.5 8.5 7.0 4.0 164 chrX 19406605 intron kek5 + chrX 19406687 intron kek5 + chrX 19406769 intron kek5 + chrX_32_19405001 chrX_19405001 EF39_1-HE 3767 chrX 19414791 19414812 chrX 19414898 19414919 15 106 16.5 12.5 14.5 1.0 128 chrX 19414791 intron kek5 + chrX 19414855 intron kek5 + chrX 19414919 intron kek5 + chrX_15_19410001 chrX_19410001 EF39_1-HE 3768 chrX 19426152 19426174 chrX 19426255 19426277 9 103 2.5 3.5 3.0 2.2 125 chrX 19426152 intron kek5 + chrX 19426214 intron kek5 + chrX 19426277 intron kek5 + chrX_9_19425001 chrX_19425001 EF39_1-HE 3769 chrX 19430519 19430565 chrX 19430643 19430689 15 124 2.5 3.0 2.8 3.9 170 chrX 19430519 intron kek5 + chrX 19430604 intron kek5 + chrX 19430689 intron kek5 + chrX_15_19430001 chrX_19430001 EF39_1-HE 3770 chrX 19458600 19458642 chrX 19458706 19458748 12 105 5.0 8.0 6.5 1.6 148 chrX 19458600 intron kek5 + chrX 19458674 intron kek5 + chrX 19458748 intron kek5 + chrX_12_19455001 chrX_19455001 EF39_1-HE 3771 chrX 19472120 19472130 chrX 19472716 19472726 jockey 4 596 0.0 2.0 1.0 2.0 606 chrX 19472120 intergenic kek5 + chrX 19472423 intergenic not near genes chrX 19472726 intergenic not near genes chrX_4_19470001 chrX_19470001 EF39_1-HE 3772 chrX 19500532 19500749 chrX 19500635 19500862 30 106 2.0 4.0 3.0 7.5 330 chrX 19500532 intron,intron CG14200 +,Pfrx + chrX 19500697 intron,intron CG14200 +,Pfrx + chrX 19500862 intron,intron CG14200 +,Pfrx + chrX_30_19500001 chrX_19500001 EF39_1-HE 3773 chrX 19541407 19541440 chrX 19541513 19541546 7 106 0.5 3.5 2.0 2.3 139 chrX 19541407 intron CG32532 - chrX 19541476 intron CG32532 - chrX 19541546 intron CG32532 - chrX_7_19540001 chrX_19540001 EF39_1-HE 3774 chrX 19547631 19547677 chrX 19547748 19547794 25 117 6.0 0.5 3.2 6.0 163 chrX 19547631 intergenic CG32532 - chrX 19547712 intergenic CG32532 - chrX 19547794 intergenic CG32532 - chrX_25_19545001 chrX_19545001 EF39_1-HE 3775 chrX 19576532 19576591 chrX 19576636 19576695 14 103 0.0 2.5 1.2 6.4 163 chrX 19576532 intron Tao - chrX 19576614 intron Tao - chrX 19576695 exon Tao - chrX_14_19575001 chrX_19575001 EF39_1-HE 3776 chrX 19586362 19586398 chrX 19586465 19586505 9 108 3.0 5.5 4.2 1.7 143 chrX 19586362 exon CG14204 + chrX 19586434 exon CG14204 + chrX 19586505 exon CG14204 + chrX_9_19585001 chrX_19585001 EF39_1-HE 3777 chrX 19593927 19593967 chrX 19594038 19594078 17 111 5.5 8.0 6.8 2.2 151 chrX 19593927 exon CG14205 + chrX 19594002 intron CG14205 + chrX 19594078 intron CG14205 + chrX_17_19590001 chrX_19590001 EF39_1-HE 3778 chrX 19599720 19599755 chrX 19599831 19599866 5 111 3.0 7.0 5.0 0.8 146 chrX 19599720 3` UTR RpS10b + chrX 19599793 3` UTR RpS10b + chrX 19599866 3` UTR CG14220 - chrX_5_19595001 chrX_19595001 EF39_1-HE 3779 chrX 19689382 19689427 chrX 19689486 19689502 4 97 2.5 2.0 2.2 1.2 120 chrX 19689382 intergenic Mer -,CG14227 - chrX 19689442 intergenic Mer -,CG14227 - chrX 19689502 intergenic Mer - chrX_4_19685001 chrX_19685001 EF39_1-HE 3780 chrX 19710049 19710099 chrX 19711861 19711911 S-element 12 1812 9.0 5.0 7.0 1.5 1862 chrX 19710049 intron meso18E - chrX 19710980 intron meso18E - chrX 19711911 intron meso18E - chrX_12_19710001 chrX_19710001 EF39_1-HE 3781 chrX 19724151 19724185 chrX 19724259 19724304 12 114 10.0 0.0 5.0 2.0 153 chrX 19724151 intron CG12531 + chrX 19724228 intron CG12531 + chrX 19724304 intron CG12531 + chrX_12_19720001 chrX_19720001 EF39_1-HE 3782 chrX 19769485 19769504 chrX 19769588 19769607 6 103 12.0 1.5 6.8 0.8 122 chrX 19769485 exon vfl - chrX 19769546 intron vfl - chrX 19769607 intron vfl - chrX_6_19765001 chrX_19765001 EF39_1-HE 3783 chrX 19790417 19790475 chrX 19790524 19790582 12 107 6.0 19.0 12.5 0.9 165 chrX 19790417 intergenic not near genes chrX 19790500 intergenic not near genes chrX 19790582 intergenic not near genes chrX_12_19790001 chrX_19790001 EF39_1-HE 3784 chrX 19791236 19791290 chrX 19791356 19791410 26 120 8.5 2.5 5.5 4.0 174 chrX 19791236 intergenic not near genes chrX 19791323 intergenic not near genes chrX 19791410 intergenic not near genes chrX_26_19790001 chrX_19790001 EF39_1-HE 3785 chrX 19797324 19797340 chrX 19804663 19804679 Stalker4 12 7339 24.5 10.0 17.2 0.7 7355 chrX 19797324 intergenic not near genes chrX 19801002 intergenic not near genes chrX 19804679 intergenic not near genes chrX_12_19800001 chrX_19800001 EF39_1-HE 3786 chrX 19817446 19817494 chrX 19817569 19817617 20 123 10.5 5.5 8.0 2.2 171 chrX 19817446 intergenic not near genes chrX 19817532 intergenic not near genes chrX 19817617 intergenic not near genes chrX_20_19815001 chrX_19815001 EF39_1-HE 3787 chrX 19821601 19821750 chrX 19821711 19821861 16 111 0.0 0.0 0.0 16.0 260 chrX 19821601 intergenic not near genes chrX 19821731 intergenic not near genes chrX 19821861 intergenic not near genes chrX_16_19820001 chrX_19820001 EF39_1-HE 3788 chrX 19822550 19822561 chrX 19822651 19822663 7 102 1.0 2.5 1.8 2.5 113 chrX 19822550 intergenic not near genes chrX 19822606 intergenic not near genes chrX 19822663 intergenic not near genes chrX_7_19820001 chrX_19820001 EF39_1-HE 3789 chrX 19822806 19822860 chrX 19822999 19823053 27 191 5.0 5.5 5.2 4.4 247 chrX 19822806 intergenic not near genes chrX 19822930 intergenic skpE - chrX 19823053 intergenic skpE - chrX_27_19820001 chrX_19820001 EF39_1-HE 3790 chrX 19838481 19838516 chrX 19838585 19838620 5 104 5.5 3.5 4.5 0.9 139 chrX 19838481 intron pico - chrX 19838550 intron pico - chrX 19838620 intron pico - chrX_5_19835001 chrX_19835001 EF39_1-HE 3791 chrX 19871627 19871673 chrX 19871732 19871780 14 107 2.0 1.5 1.8 5.0 153 chrX 19871627 intron Hers + chrX 19871704 intron Hers + chrX 19871780 intron Hers + chrX_14_19870001 chrX_19870001 EF39_1-HE 3792 chrX 19897376 19897411 chrX 19897479 19897514 13 102 7.5 6.0 6.8 1.7 138 chrX 19897376 intron Hers + chrX 19897445 intron Hers + chrX 19897514 intron Hers + chrX_13_19895001 chrX_19895001 EF39_1-HE 3793 chrX 19970379 19970394 chrX 19970485 19970500 4 106 3.5 5.5 4.5 0.7 121 chrX 19970379 intergenic not near genes chrX 19970440 intergenic not near genes chrX 19970500 intergenic not near genes chrX_4_19970001 chrX_19970001 EF39_1-HE 3794 chrX 19971175 19971213 chrX 19971287 19971325 7 112 1.5 5.5 3.5 1.6 150 chrX 19971175 intergenic not near genes chrX 19971250 intergenic not near genes chrX 19971325 intergenic not near genes chrX_7_19970001 chrX_19970001 EF39_1-HE 3795 chrX 19971797 19971817 chrX 19971900 19971920 4 103 4.0 10.0 7.0 0.5 123 chrX 19971797 intergenic not near genes chrX 19971858 intergenic not near genes chrX 19971920 intergenic not near genes chrX_4_19970001 chrX_19970001 EF39_1-HE 3796 chrX 19992396 19992428 chrX 19992498 19992499 6 96 5.0 4.5 4.8 1.0 103 chrX 19992396 intergenic not near genes chrX 19992448 intergenic not near genes chrX 19992499 intergenic not near genes chrX_6_19990001 chrX_19990001 EF39_1-HE 3797 chrX 20012741 20012791 chrX 20012878 20012930 19 138 3.5 7.0 5.2 3.1 189 chrX 20012741 intron Dop2R - chrX 20012836 intron Dop2R - chrX 20012930 intron Dop2R - chrX_19_20010001 chrX_20010001 EF39_1-HE 3798 chrX 20041505 20041555 chrX 20041611 20041660 14 106 4.5 1.5 3.0 3.5 155 chrX 20041505 intron Dop2R - chrX 20041582 intron Dop2R - chrX 20041660 intron Dop2R - chrX_14_20040001 chrX_20040001 EF39_1-HE 3799 chrX 20056614 20056632 chrX 20056717 20056735 7 103 0.0 0.5 0.2 5.8 121 chrX 20056614 intron Dop2R - chrX 20056674 intron Dop2R - chrX 20056735 intron Dop2R - chrX_7_20055001 chrX_20055001 EF39_1-HE 3800 chrX 20065711 20065752 chrX 20065816 20065857 14 105 3.0 3.5 3.2 3.3 146 chrX 20065711 intergenic not near genes chrX 20065784 intergenic not near genes chrX 20065857 intergenic not near genes chrX_14_20065001 chrX_20065001 EF39_1-HE 3801 chrX 20067542 20067599 chrX 20067945 20067982 18 399 3.0 7.5 5.2 2.9 440 chrX 20067542 intergenic not near genes chrX 20067762 intergenic not near genes chrX 20067982 intergenic not near genes chrX_18_20065001 chrX_20065001 EF39_1-HE 3802 chrX 20068599 20068614 chrX 20068707 20068722 7 108 4.5 11.5 8.0 0.8 123 chrX 20068599 intergenic not near genes chrX 20068660 intergenic not near genes chrX 20068722 intergenic not near genes chrX_7_20065001 chrX_20065001 EF39_1-HE 3803 chrX 20070465 20070518 chrX 20070580 20070619 10 114 5.0 2.5 3.8 2.1 154 chrX 20070465 intergenic not near genes chrX 20070542 intergenic not near genes chrX 20070619 intergenic not near genes chrX_10_20070001 chrX_20070001 EF39_1-HE 3804 chrX 20081168 20081199 chrX 20081271 20081314 5 113 0.0 5.5 2.8 1.3 146 chrX 20081168 intergenic not near genes chrX 20081241 intergenic not near genes chrX 20081314 intergenic not near genes chrX_5_20080001 chrX_20080001 EF39_1-HE 3805 chrX 20090575 20090609 chrX 20090680 20090705 7 102 6.0 6.0 6.0 1.0 130 chrX 20090575 intergenic CR45628 + chrX 20090640 intergenic CR45628 + chrX 20090705 5` UTR CR45628 + chrX_7_20090001 chrX_20090001 EF39_1-HE 3806 chrX 20093075 20093098 chrX 20093240 20093264 5 166 2.0 3.5 2.8 1.3 189 chrX 20093075 intergenic not near genes chrX 20093170 intergenic not near genes chrX 20093264 intergenic not near genes chrX_5_20090001 chrX_20090001 EF39_1-HE 3807 chrX 20131150 20131175 chrX 20131253 20131278 9 103 9.0 5.5 7.2 1.1 128 chrX 20131150 5` UTR CG42582 - chrX 20131214 5` UTR CG42582 - chrX 20131278 5` UTR CG42582 - chrX_9_20130001 chrX_20130001 EF39_1-HE 3808 chrX 20133857 20133878 chrX 20133966 20133987 5 109 6.5 9.0 7.8 0.6 130 chrX 20133857 5` UTR CG15322 + chrX 20133922 5` UTR CG15322 + chrX 20133987 5` UTR CG15322 + chrX_5_20130001 chrX_20130001 EF39_1-HE 3809 chrX 20144643 20144700 chrX 20144750 20144807 12 107 3.0 4.5 3.8 2.5 164 chrX 20144643 intergenic not near genes chrX 20144725 intergenic not near genes chrX 20144807 intergenic not near genes chrX_12_20140001 chrX_20140001 EF39_1-HE 3810 chrX 20262882 20262905 chrX 20263018 20263041 4 136 4.0 4.0 4.0 0.8 159 chrX 20262882 intergenic not near genes chrX 20262962 intergenic not near genes chrX 20263041 intergenic not near genes chrX_4_20260001 chrX_20260001 EF39_1-HE 3811 chrX 20263400 20263424 chrX 20263516 20263540 5 115 4.0 1.5 2.8 1.3 140 chrX 20263400 intergenic not near genes chrX 20263470 intergenic not near genes chrX 20263540 intergenic not near genes chrX_5_20260001 chrX_20260001 EF39_1-HE 3812 chrX 20271490 20271513 chrX 20271608 20271630 4 118 4.0 0.0 2.0 1.3 140 chrX 20271490 intergenic not near genes chrX 20271560 intergenic not near genes chrX 20271630 intergenic not near genes chrX_4_20270001 chrX_20270001 EF39_1-HE 3813 chrX 20320279 20320308 chrX 20320382 20320410 4 103 1.0 2.0 1.5 1.6 131 chrX 20320279 intron CG1504 - chrX 20320344 intron CG1504 - chrX 20320410 intron CG1504 - chrX_4_20320001 chrX_20320001 EF39_1-HE 3814 chrX 20362636 20362694 chrX 20362740 20362806 23 106 0.0 0.0 0.0 23.0 170 chrX 20362636 intergenic not near genes chrX 20362721 intergenic not near genes chrX 20362806 intergenic not near genes chrX_23_20360001 chrX_20360001 EF39_1-HE 3815 chrX 20367656 20367720 chrX 20367765 20367820 20 105 6.5 3.5 5.0 3.3 164 chrX 20367656 intergenic not near genes chrX 20367738 intergenic not near genes chrX 20367820 intergenic not near genes chrX_20_20365001 chrX_20365001 EF39_1-HE 3816 chrX 20374066 20374127 chrX 20374168 20374229 12 102 5.5 4.0 4.8 2.1 163 chrX 20374066 intergenic not near genes chrX 20374148 intergenic not near genes chrX 20374229 intergenic not near genes chrX_12_20370001 chrX_20370001 EF39_1-HE 3817 chrX 20386411 20386458 chrX 20386612 20386659 7 201 2.0 3.0 2.5 2.0 248 chrX 20386411 intergenic not near genes chrX 20386535 intergenic not near genes chrX 20386659 intergenic not near genes chrX_7_20385001 chrX_20385001 EF39_1-HE 3818 chrX 20426178 20426236 chrX 20428346 20428404 27 2171 45.5 38.0 41.8 0.6 2226 chrX 20426178 exon cactin + chrX 20427291 intergenic CG11710 -,CG15456 - chrX 20428404 exon CG11710 - chrX_27_20425001 chrX_20425001 EF39_1-HE 3819 chrX 20448945 20449147 chrX 20449112 20449253 9 133 0.0 0.0 0.0 9.0 308 chrX 20448945 intergenic CG32506 + chrX 20449099 intergenic CG32506 + chrX 20449253 intergenic CG32506 + chrX_9_20445001 chrX_20445001 EF39_1-HE 3820 chrX 20483855 20483896 chrX 20483966 20484007 10 111 3.5 4.0 3.8 2.1 152 chrX 20483855 intron RhoGAP19D - chrX 20483931 intron RhoGAP19D - chrX 20484007 intron RhoGAP19D - chrX_10_20480001 chrX_20480001 EF39_1-HE 3821 chrX 20488103 20488123 chrX 20488205 20488218 9 101 8.0 19.0 13.5 0.6 115 chrX 20488103 intron RhoGAP19D - chrX 20488160 intron RhoGAP19D - chrX 20488218 intron RhoGAP19D - chrX_9_20485001 chrX_20485001 EF39_1-HE 3822 chrX 20493885 20493930 chrX 20494070 20494117 8 187 0.0 4.5 2.2 2.5 232 chrX 20493885 intron RhoGAP19D - chrX 20494001 intron RhoGAP19D - chrX 20494117 intron RhoGAP19D - chrX_8_20490001 chrX_20490001 EF39_1-HE 3823 chrX 20497647 20497678 chrX 20497755 20497783 6 106 5.5 12.0 8.8 0.6 136 chrX 20497647 intron RhoGAP19D - chrX 20497715 intron RhoGAP19D - chrX 20497783 intron RhoGAP19D - chrX_6_20495001 chrX_20495001 EF39_1-HE 3824 chrX 20504106 20504157 chrX 20505653 20505704 transib2 6 1547 2.5 2.0 2.2 1.9 1598 chrX 20504106 intron RhoGAP19D - chrX 20504905 intron RhoGAP19D - chrX 20505704 intron RhoGAP19D - chrX_6_20500001 chrX_20500001 EF39_1-HE 3825 chrX 20528586 20528618 chrX 20528960 20528992 11 372 3.5 2.5 3.0 2.8 406 chrX 20528586 intergenic not near genes chrX 20528789 intergenic not near genes chrX 20528992 intergenic not near genes chrX_11_20525001 chrX_20525001 EF39_1-HE 3826 chrX 20559019 20559146 chrX 20559122 20559260 9 113 0.0 0.0 0.0 9.0 241 chrX 20559019 intron RunxB + chrX 20559140 intron RunxB + chrX 20559260 intron RunxB + chrX_9_20555001 chrX_20555001 EF39_1-HE 3827 chrX 20563635 20563666 chrX 20563752 20563783 12 117 3.5 4.5 4.0 2.4 148 chrX 20563635 intron RunxB + chrX 20563709 intron RunxB + chrX 20563783 intron RunxB + chrX_12_20560001 chrX_20560001 EF39_1-HE 3828 chrX 20578051 20578108 chrX 20578156 20578212 7 105 5.5 2.5 4.0 1.4 161 chrX 20578051 intergenic not near genes chrX 20578132 intergenic not near genes chrX 20578212 intergenic not near genes chrX_7_20575001 chrX_20575001 EF39_1-HE 3829 chrX 20583712 20583759 chrX 20583833 20583880 15 121 4.0 4.0 4.0 3.0 168 chrX 20583712 intergenic not near genes chrX 20583796 intergenic not near genes chrX 20583880 intergenic not near genes chrX_15_20580001 chrX_20580001 EF39_1-HE 3830 chrX 20622823 20622870 chrX 20622948 20622995 14 125 5.0 3.0 4.0 2.8 172 chrX 20622823 intron RunxA - chrX 20622909 intron RunxA - chrX 20622995 intron RunxA - chrX_14_20620001 chrX_20620001 EF39_1-HE 3831 chrX 20626272 20626315 chrX 20626390 20626434 24 118 4.5 6.0 5.2 3.9 162 chrX 20626272 intergenic not near genes chrX 20626353 intergenic not near genes chrX 20626434 intergenic not near genes chrX_24_20625001 chrX_20625001 EF39_1-HE 3832 chrX 20704145 20704184 chrX 20704433 20704472 7 286 1.0 1.5 1.2 3.2 327 chrX 20704145 intergenic not near genes chrX 20704308 intergenic not near genes chrX 20704472 intergenic not near genes chrX_7_20700001 chrX_20700001 EF39_1-HE 3833 chrX 20710414 20710438 chrX 20710518 20710542 6 104 0.5 0.5 0.5 4.0 128 chrX 20710414 intergenic not near genes chrX 20710478 intergenic not near genes chrX 20710542 intergenic not near genes chrX_6_20710001 chrX_20710001 EF39_1-HE 3834 chrX 20751274 20751326 chrX 20751393 20751438 7 113 1.0 0.5 0.8 3.9 164 chrX 20751274 intergenic not near genes chrX 20751356 intergenic not near genes chrX 20751438 intergenic not near genes chrX_7_20750001 chrX_20750001 EF39_1-HE 3835 chrX 20774433 20774476 chrX 20774538 20774581 11 104 5.5 1.5 3.5 2.4 148 chrX 20774433 intron shakB - chrX 20774507 intron shakB - chrX 20774581 intron shakB - chrX_11_20770001 chrX_20770001 EF39_1-HE 3836 chrX 20790358 20790402 chrX 20790462 20790506 10 104 3.5 4.0 3.8 2.1 148 chrX 20790358 intron shakB - chrX 20790432 intron shakB - chrX 20790506 intron shakB - chrX_10_20790001 chrX_20790001 EF39_1-HE 3837 chrX 20836711 20836758 chrX 20844339 20844386 roo 4 7628 1.0 2.0 1.5 1.6 7675 chrX 20836711 intron shakB - chrX 20840548 intron shakB - chrX 20844386 intron shakB - chrX_4_20840001 chrX_20840001 EF39_1-HE 3838 chrX 20876038 20876057 chrX 20876142 20876165 9 108 5.5 7.5 6.5 1.2 127 chrX 20876038 intron shakB - chrX 20876102 intron shakB - chrX 20876165 intron shakB - chrX_9_20875001 chrX_20875001 EF39_1-HE 3839 chrX 20881616 20881624 chrX 20881753 20881761 5 137 6.5 8.5 7.5 0.6 145 chrX 20881616 intron shakB - chrX 20881688 intron shakB - chrX 20881761 intron shakB - chrX_5_20880001 chrX_20880001 EF39_1-HE 3840 chrX 20928117 20928169 chrX 20928308 20928361 9 192 2.0 1.0 1.5 3.6 244 chrX 20928117 intergenic not near genes chrX 20928239 intergenic not near genes chrX 20928361 intergenic not near genes chrX_9_20925001 chrX_20925001 EF39_1-HE 3841 chrX 20940698 20940733 chrX 20942193 20942228 hobo 17 1494 6.5 0.5 3.5 3.8 1530 chrX 20940698 intergenic not near genes chrX 20941463 intergenic not near genes chrX 20942228 intergenic not near genes chrX_17_20940001 chrX_20940001 EF39_1-HE 3842 chrX 20956987 20957002 chrX 20962455 20962470 I-element 5 5468 0.0 3.5 1.8 1.8 5483 chrX 20956987 intergenic not near genes chrX 20959728 intergenic not near genes chrX 20962470 intergenic Ser6 - chrX_5_20955001 chrX_20955001 EF39_1-HE 3843 chrX 20974160 20974202 chrX 20974359 20974401 13 199 1.0 5.0 3.0 3.2 241 chrX 20974160 intergenic not near genes chrX 20974280 intergenic not near genes chrX 20974401 intergenic not near genes chrX_13_20970001 chrX_20970001 EF39_1-HE 3844 chrX 21008631 21008689 chrX 21008745 21008803 7 114 6.0 5.5 5.8 1.0 172 chrX 21008631 intergenic not near genes chrX 21008717 intergenic not near genes chrX 21008803 intergenic not near genes chrX_7_21005001 chrX_21005001 EF39_1-HE 3845 chrX 21009823 21009881 chrX 21009933 21009992 9 111 6.0 6.0 6.0 1.3 169 chrX 21009823 intergenic not near genes chrX 21009908 intergenic not near genes chrX 21009992 intergenic not near genes chrX_9_21005001 chrX_21005001 EF39_1-HE 3846 chrX 21016340 21016368 chrX 21016445 21016464 15 103 10.5 20.5 15.5 0.9 124 chrX 21016340 intergenic not near genes chrX 21016402 intergenic not near genes chrX 21016464 intergenic not near genes chrX_15_21015001 chrX_21015001 EF39_1-HE 3847 chrX 21029161 21029178 chrX 21029396 21029421 5 241 1.5 4.5 3.0 1.2 260 chrX 21029161 3` UTR CG1529 - chrX 21029291 3` UTR CG1529 - chrX 21029421 3` UTR CG1529 - chrX_5_21025001 chrX_21025001 EF39_1-HE 3848 chrX 21032413 21032438 chrX 21032526 21032551 8 116 0.5 3.5 2.0 2.7 138 chrX 21032413 intergenic CG1529 - chrX 21032482 intergenic not near genes chrX 21032551 intergenic not near genes chrX_8_21030001 chrX_21030001 EF39_1-HE 3849 chrX 21046496 21046542 chrX 21046628 21046674 7 132 0.0 3.5 1.8 2.5 178 chrX 21046496 intron Cbs + chrX 21046585 intron Cbs + chrX 21046674 intron Cbs + chrX_7_21045001 chrX_21045001 EF39_1-HE 3850 chrX 21058653 21058678 chrX 21058769 21058794 6 116 4.0 10.0 7.0 0.8 141 chrX 21058653 intron bves + chrX 21058724 intron bves + chrX 21058794 intron bves + chrX_6_21055001 chrX_21055001 EF39_1-HE 3851 chrX 21061853 21061890 chrX 21062365 21062402 roo 4 512 5.5 4.0 4.8 0.7 549 chrX 21061853 intron bves + chrX 21062128 intron bves + chrX 21062402 intron,3` UTR bves +,CG32512 - chrX_4_21060001 chrX_21060001 EF39_1-HE 3852 chrX 21077571 21077630 chrX 21077685 21077742 20 112 1.5 3.5 2.5 5.7 171 chrX 21077571 intron bves + chrX 21077656 intron bves + chrX 21077742 intron bves + chrX_20_21075001 chrX_21075001 EF39_1-HE 3853 chrX 21078746 21078766 chrX 21078850 21078870 8 104 4.5 3.5 4.0 1.6 124 chrX 21078746 intron bves + chrX 21078808 intron bves + chrX 21078870 intron bves + chrX_8_21075001 chrX_21075001 EF39_1-HE 3854 chrX 20144552 20144556 chrX 21085239 21085247 5 940688 10.0 25.5 17.8 0.3 940695 chrX 20144552 intergenic not near genes chrX 20614900 intron RunxA - chrX 21085247 intergenic not near genes chrX_5_20610001 chrX_20610001 EF39_1-HE 3855 chrX 21086103 21086156 chrX 21087158 21087211 jockey 23 1055 3.5 3.5 3.5 5.1 1108 chrX 21086103 intergenic not near genes chrX 21086657 intergenic not near genes chrX 21087211 intergenic not near genes chrX_23_21085001 chrX_21085001 EF39_1-HE 3856 chrX 21166115 21166165 chrX 21166219 21166272 5 105 1.5 1.5 1.5 2.0 157 chrX 21166115 intergenic not near genes chrX 21166194 intergenic not near genes chrX 21166272 intergenic not near genes chrX_5_21165001 chrX_21165001 EF39_1-HE 3857 chrX 21253267 21253289 chrX 21253370 21253392 8 103 10.0 7.0 8.5 0.8 125 chrX 21253267 intron CG32521 - chrX 21253330 intron CG32521 - chrX 21253392 intron CG32521 - chrX_8_21250001 chrX_21250001 EF39_1-HE 3858 chrX 21257339 21257358 chrX 21257477 21257486 5 133 3.5 14.0 8.8 0.5 147 chrX 21257339 intron CG32521 - chrX 21257412 intron CG32521 - chrX 21257486 intron CG32521 - chrX_5_21255001 chrX_21255001 EF39_1-HE 3859 chrX 21258812 21258852 chrX 21258938 21258978 10 126 3.5 0.5 2.0 3.3 166 chrX 21258812 intron CG32521 - chrX 21258895 intron CG32521 - chrX 21258978 intron CG32521 - chrX_10_21255001 chrX_21255001 EF39_1-HE 3860 chrX 21275146 21275178 chrX 21275250 21275282 12 104 1.5 2.5 2.0 4.0 136 chrX 21275146 intron CG32521 - chrX 21275214 intron CG32521 - chrX 21275282 intron CG32521 - chrX_12_21275001 chrX_21275001 EF39_1-HE 3861 chrX 21308866 21308923 chrX 21308983 21309060 10 130 4.5 0.0 2.2 3.1 194 chrX 21308866 exon CG1801 - chrX 21308963 intron CG1801 - chrX 21309060 intron CG1801 - chrX_10_21305001 chrX_21305001 EF39_1-HE 3862 chrX 21311640 21311674 chrX 21311767 21311801 5 127 1.5 0.0 0.8 2.8 161 chrX 21311640 intron CG1801 - chrX 21311720 intron CG1801 - chrX 21311801 intron CG1801 - chrX_5_21310001 chrX_21310001 EF39_1-HE 3863 chrX 21343283 21343400 chrX 21343391 21343505 28 106 0.0 0.0 0.0 28.0 222 chrX 21343283 intron fliI + chrX 21343394 intron fliI + chrX 21343505 exon fliI + chrX_28_21340001 chrX_21340001 EF39_1-HE 3864 chrX 21398177 21398214 chrX 21398279 21398316 14 102 0.0 5.0 2.5 4.0 139 chrX 21398177 intergenic not near genes chrX 21398246 intergenic not near genes chrX 21398316 intergenic not near genes chrX_14_21395001 chrX_21395001 EF39_1-HE 3865 chrX 21398859 21398908 chrX 21398962 21399011 11 102 3.5 5.5 4.5 2.0 152 chrX 21398859 intergenic not near genes chrX 21398935 intergenic not near genes chrX 21399011 intergenic not near genes chrX_11_21395001 chrX_21395001 EF39_1-HE 3866 chrX 21410633 21410672 chrX 21410738 21410777 4 105 0.0 2.0 1.0 2.0 144 chrX 21410633 intergenic CR45003 - chrX 21410705 intergenic CR45003 - chrX 21410777 intergenic CR45003 - chrX_4_21410001 chrX_21410001 EF39_1-HE 3867 chrX 21429981 21430028 chrX 21430085 21430132 8 104 0.5 0.0 0.2 6.7 151 chrX 21429981 intron CG42343 - chrX 21430056 intron CG42343 - chrX 21430132 intron CG42343 - chrX_8_21430001 chrX_21430001 EF39_1-HE 3868 chrX 21449241 21449262 chrX 21449346 21449362 5 104 7.5 11.0 9.2 0.5 121 chrX 21449241 intron CG42343 - chrX 21449302 intron CG42343 - chrX 21449362 intron CG42343 - chrX_5_21445001 chrX_21445001 EF39_1-HE 3869 chrX 21454842 21454872 chrX 21454952 21454982 7 110 2.5 2.0 2.2 2.2 140 chrX 21454842 intron CG42343 - chrX 21454912 intron CG42343 - chrX 21454982 intron CG42343 - chrX_7_21450001 chrX_21450001 EF39_1-HE 3870 chrX 21455218 21455234 chrX 21455431 21455447 5 213 1.0 5.5 3.2 1.2 229 chrX 21455218 intron CG42343 - chrX 21455332 intron CG42343 - chrX 21455447 intron CG42343 - chrX_5_21455001 chrX_21455001 EF39_1-HE 3871 chrX 21458691 21458722 chrX 21464153 21464184 Ivk 14 5462 4.5 1.5 3.0 3.5 5493 chrX 21458691 intergenic not near genes chrX 21461438 intergenic not near genes chrX 21464184 intergenic not near genes chrX_14_21460001 chrX_21460001 EF39_1-HE 3872 chrX 21464920 21464965 chrX 21465025 21465070 14 105 3.5 1.0 2.2 4.4 150 chrX 21464920 intergenic not near genes chrX 21464995 intergenic not near genes chrX 21465070 intergenic not near genes chrX_14_21460001 chrX_21460001 EF39_1-HE 3873 chrX 21466987 21467016 chrX 21467097 21467126 11 110 6.5 3.0 4.8 1.9 139 chrX 21466987 intergenic CR45507 - chrX 21467056 intergenic CR45507 - chrX 21467126 intergenic CR45507 - chrX_11_21465001 chrX_21465001 EF39_1-HE 3874 chrX 21467027 21467044 chrX 21467136 21467154 4 110 3.5 5.0 4.2 0.8 127 chrX 21467027 intergenic CR45507 - chrX 21467090 intergenic CR45507 - chrX 21467154 3` UTR CR45507 - chrX_4_21465001 chrX_21465001 EF39_1-HE 3875 chrX 21474385 21474432 chrX 21474777 21474824 1731 5 392 3.5 2.0 2.8 1.3 439 chrX 21474385 intergenic not near genes chrX 21474604 intergenic not near genes chrX 21474824 intergenic not near genes chrX_5_21470001 chrX_21470001 EF39_1-HE 3876 chrX 21492247 21492306 chrX 21492386 21492445 13 137 0.0 3.0 1.5 5.2 198 chrX 21492247 intergenic not near genes chrX 21492346 intergenic not near genes chrX 21492445 intergenic not near genes chrX_13_21490001 chrX_21490001 EF39_1-HE 3877 chrX 21561641 21561660 chrX 21561747 21561767 9 106 24.0 13.0 18.5 0.5 126 chrX 21561641 intergenic not near genes chrX 21561704 intergenic not near genes chrX 21561767 intergenic not near genes chrX_9_21560001 chrX_21560001 EF39_1-HE 3878 chrX 21565397 21565439 chrX 21565500 21565543 19 104 5.0 6.0 5.5 2.9 146 chrX 21565397 intergenic not near genes chrX 21565470 intergenic not near genes chrX 21565543 intergenic not near genes chrX_19_21565001 chrX_21565001 EF39_1-HE 3879 chrX 21567925 21567950 chrX 21568038 21568063 12 113 10.0 0.5 5.2 1.9 138 chrX 21567925 intergenic not near genes chrX 21567994 intergenic not near genes chrX 21568063 intergenic not near genes chrX_12_21565001 chrX_21565001 EF39_1-HE 3880 chrX 2912197 2912213 chrX 21583075 21583093 4 18670878 12.5 14.5 13.5 0.3 18670896 chrX 2912197 intron kirre + chrX 12247645 intron Ten-a + chrX 21583093 intergenic not near genes chrX_4_12245001 chrX_12245001 EF39_1-HE 3881 chrX 21624892 21624921 chrX 21625007 21625037 7 116 3.0 0.5 1.8 2.5 145 chrX 21624892 3` UTR DIP1 - chrX 21624964 3` UTR DIP1 - chrX 21625037 3` UTR DIP1 - chrX_7_21620001 chrX_21620001 EF39_1-HE 3882 chrX 21668235 21668283 chrX 21668346 21668394 21 111 1.5 0.0 0.8 11.7 159 chrX 21668235 intergenic not near genes chrX 21668314 intergenic not near genes chrX 21668394 intergenic not near genes chrX_21_21665001 chrX_21665001 EF39_1-HE 3883 chrX 22426869 22426924 chrX 22426971 22427026 6 102 1.0 0.0 0.5 4.0 157 chrX 22426869 intergenic not near genes chrX 22426948 intergenic not near genes chrX 22427026 intergenic not near genes chrX_6_22425001 chrX_22425001 EF39_1-HE 3884 chrX 22478875 22478892 chrX 22479034 22479051 5 159 0.0 7.0 3.5 1.1 176 chrX 22478875 intron CG12576 - chrX 22478963 intron CG12576 - chrX 22479051 intron CG12576 - chrX_5_22475001 chrX_22475001 EF39_1-HE 3885 chrX 22517956 22518007 chrX 22518091 22518142 12 135 3.0 4.0 3.5 2.7 186 chrX 22517956 intron CG17600 + chrX 22518049 intron CG17600 + chrX 22518142 intron CG17600 + chrX_12_22515001 chrX_22515001 EF39_1-HE 3886 chrX 22522605 22522634 chrX 22525451 22525480 NOF 4 2846 2.0 2.0 2.0 1.3 2875 chrX 22522605 intron CG17600 + chrX 22524042 intron CG17600 + chrX 22525480 intron CG17600 + chrX_4_22520001 chrX_22520001 EF39_1-HE 3887 chrX 22601345 22601392 chrX 22601448 22601490 5 102 1.5 2.0 1.8 1.8 145 chrX 22601345 intron Cda4 - chrX 22601418 intron Cda4 - chrX 22601490 intron Cda4 - chrX_5_22600001 chrX_22600001 EF39_1-HE 3888 chrX 22664682 22664705 chrX 22664770 22664821 11 113 2.5 5.5 4.0 2.2 139 chrX 22664682 intron CR44997 + chrX 22664752 intron CR44997 + chrX 22664821 intron CR44997 + chrX_11_22660001 chrX_22660001 EF39_1-HE 3889 chrX 22667253 22667277 chrX 22667392 22667416 7 139 9.0 0.5 4.8 1.2 163 chrX 22667253 intron CR44997 + chrX 22667334 intron CR44997 + chrX 22667416 intron CR44997 + chrX_7_22665001 chrX_22665001 EF39_1-HE 3890 chrX 22675598 22675639 chrX 22675705 22675747 16 108 7.0 1.5 4.2 3.1 149 chrX 22675598 intron CR44997 + chrX 22675672 intron CR44997 + chrX 22675747 intron CR44997 + chrX_16_22675001 chrX_22675001 EF39_1-HE 3891 chrX 22681460 22681509 chrX 22688944 22688993 HMS-Beagle2 22 7483 9.5 8.5 9.0 2.2 7533 chrX 22681460 intron CR44997 + chrX 22685226 intron CR44997 + chrX 22688993 intron CR44997 + chrX_22_22685001 chrX_22685001 EF39_1-HE 3892 chrX 22690463 22690504 chrX 22690584 22690625 13 121 4.0 12.0 8.0 1.4 162 chrX 22690463 intron CR44997 + chrX 22690544 intron CR44997 + chrX 22690625 intron CR44997 + chrX_13_22690001 chrX_22690001 EF39_1-HE 3893 chrX 22694297 22694346 chrX 22694413 22694463 6 116 2.0 3.5 2.8 1.6 166 chrX 22694297 intron CR44997 + chrX 22694380 intron CR44997 + chrX 22694463 intron CR44997 + chrX_6_22690001 chrX_22690001 EF39_1-HE 3894 chrX 22697476 22697516 chrX 22701799 22701837 Juan 19 4323 9.0 9.5 9.2 1.9 4361 chrX 22697476 intron CR44997 + chrX 22699656 intron CR44997 + chrX 22701837 intron CR44997 + chrX_19_22695001 chrX_22695001 EF39_1-HE 3895 chrX 22734435 22734449 chrX 22734540 22734554 7 105 3.0 4.0 3.5 1.6 119 chrX 22734435 intron CR44997 + chrX 22734494 intron CR44997 + chrX 22734554 intron CR44997 + chrX_7_22730001 chrX_22730001 EF39_1-HE 3896 chrX 22764350 22764400 chrX 22764472 22764522 12 122 3.5 7.0 5.2 1.9 172 chrX 22764350 intron CR44997 + chrX 22764436 intron CR44997 + chrX 22764522 intron CR44997 + chrX_12_22760001 chrX_22760001 EF39_1-HE 3897 chrX 22771483 22771534 chrX 22774800 22774851 297 7 3317 2.0 6.0 4.0 1.4 3368 chrX 22771483 intron CR44997 + chrX 22773167 intron CR44997 + chrX 22774851 intron CR44997 + chrX_7_22770001 chrX_22770001 EF39_1-HE 3898 chrX 22780018 22780042 chrX 22780126 22780150 10 108 0.5 5.0 2.8 2.6 132 chrX 22780018 intron CR44997 + chrX 22780084 intron CR44997 + chrX 22780150 intron CR44997 + chrX_10_22780001 chrX_22780001 EF39_1-HE 3899 chrX 22811973 22812003 chrX 22816771 22816801 F-element 9 4798 7.5 8.5 8.0 1.0 4828 chrX 22811973 intergenic CG12446 - chrX 22814387 intergenic not near genes chrX 22816801 intergenic not near genes chrX_9_22810001 chrX_22810001 EF39_1-HE 3900 chrX 22870843 22870896 chrX 22870960 22871013 13 115 1.0 6.5 3.8 2.7 170 chrX 22870843 intron,3` UTR CG42346 +,CR43656 - chrX 22870928 intron,3` UTR CG42346 +,CR43656 - chrX 22871013 intron,3` UTR CG42346 +,CR43656 - chrX_13_22870001 chrX_22870001 EF39_1-HE 3901 chrX 22987093 22987126 chrX 22989778 22989811 Burdock 4 2684 0.0 0.5 0.2 3.3 2718 chrX 22987093 intron,intron stnA -,stnB - chrX 22988452 intron,intron stnA -,stnB - chrX 22989811 intron,intron stnA -,stnB - chrX_4_22985001 chrX_22985001 EF39_1-HE 3902 chrX 23029676 23029833 chrX 23029802 23029997 6 148 0.0 0.0 0.0 6.0 321 chrX 23029676 intron zyd + chrX 23029836 intron zyd + chrX 23029997 intron zyd + chrX_6_23025001 chrX_23025001 EF39_1-HE 3903 chrX 21097501 21097511 chrX 23182765 23182773 jockey2 4 2085262 3.5 7.5 5.5 0.6 2085272 chrX 21097501 intron,intron,intron CG11566 +,stg1 +,CG15446 - chrX 22140137 intergenic not near genes chrX 23182773 intergenic not near genes chrX_4_22140001 chrX_22140001 EF39_1-HE