SV#	Chr_5p	Chr_coord_5p_start	Chr_coord_5p_end	Chr_3p	Chr_coord_3p_start	Chr_coord_3p_end	repName	Reads_collapsed	avg_del_len	RefGen_3prime	Refgen_5prime	RefGen_Avg	Coverage_Ratio	size	Chr_5p	Chr_coord_5p	classification_5p	comment_5p	Chr_mid	Chr_coord_mid	classification_mid	comment_mid	Chr_3p	Chr_coord_3p	classification_3p	comment_3p	depletion_code	loci_code	libname
2	chr2L	47457	47491	chr2L	52563	52597	jockey	37	5106	14.5	15.5	15.0	2.3	5140	chr2L	47457	intron	Cda5 -	chr2L	50027	intron	Cda5 -	chr2L	52597	intron	Cda5 -	chr2L_37_50001	chr2L_50001	CK1_1-HE
13	chr2L	347886	347914	chr2L	355387	355415	blood	12	7501	2.0	4.5	3.2	2.9	7529	chr2L	347886	3` UTR	Plc21C +	chr2L	351650	intron	Plc21C +	chr2L	355415	3` UTR	Plc21C +	chr2L_12_350001	chr2L_350001	CK1_1-HE
18	chr2L	686919	686952	chr2L	695960	695993	roo	12	9041	0.5	3.5	2.0	4.0	9074	chr2L	686919	intron	ds -	chr2L	691456	intron	ds -	chr2L	695993	intron	ds -	chr2L_12_690001	chr2L_690001	CK1_1-HE
28	chr2L	976880	976910	chr2L	984517	984547	roo	13	7637	4.5	4.0	4.2	2.5	7667	chr2L	976880	intergenic	not near genes	chr2L	980714	intergenic	not near genes	chr2L	984547	intergenic	not near genes	chr2L_13_980001	chr2L_980001	CK1_1-HE
32	chr2L	1220129	1220156	chr2L	1227596	1227623	blood	10	7467	5.5	1.0	3.2	2.4	7494	chr2L	1220129	intron	CG42329 +	chr2L	1223876	intron	CG42329 +	chr2L	1227623	intron	CG42329 +	chr2L_10_1220001	chr2L_1220001	CK1_1-HE
38	chr2L	1301751	1301784	chr2L	1302289	1302324	gypsy	9	540	0.0	11.0	5.5	1.4	573	chr2L	1301751	intergenic	not near genes	chr2L	1302038	intergenic	not near genes	chr2L	1302324	intergenic	not near genes	chr2L_9_1300001	chr2L_1300001	CK1_1-HE
46	chr2L	1570683	1570718	chr2L	1573556	1573591	F-element	28	2873	5.0	14.5	9.8	2.6	2908	chr2L	1570683	intron	haf +	chr2L	1572137	intron	haf +	chr2L	1573591	intron	haf +	chr2L_28_1570001	chr2L_1570001	CK1_1-HE
52	chr2L	1678974	1679006	chr2L	1686440	1686472	blood	28	7466	10.5	14.0	12.2	2.1	7498	chr2L	1678974	intron	chinmo +	chr2L	1682723	intron	chinmo +	chr2L	1686472	intron	chinmo +	chr2L_28_1680001	chr2L_1680001	CK1_1-HE
62	chr2L	2100375	2100403	chr2L	2109527	2109555	roo	14	9151	9.0	5.5	7.2	1.7	9180	chr2L	2100375	intron	dpr3 -	chr2L	2104965	intron	dpr3 -	chr2L	2109555	intron	dpr3 -	chr2L_14_2100001	chr2L_2100001	CK1_1-HE
63	chr2L	2112119	2112145	chr2L	2119775	2119808	opus	14	7662	7.0	5.0	6.0	2.0	7689	chr2L	2112119	intergenic	not near genes	chr2L	2115964	intergenic	not near genes	chr2L	2119808	intergenic	not near genes	chr2L_14_2115001	chr2L_2115001	CK1_1-HE
71	chr2L	2294039	2294075	chr2L	2299245	2299281	copia	8	5206	5.0	5.0	5.0	1.3	5242	chr2L	2294039	intergenic	not near genes	chr2L	2296660	intergenic	not near genes	chr2L	2299281	intergenic	not near genes	chr2L_8_2295001	chr2L_2295001	CK1_1-HE
83	chr2L	2565556	2565562	chr2L	2571630	2571636	297	4	6074	2.5	0.5	1.5	1.6	6080	chr2L	2565556	exon	Cyp309a2 -	chr2L	2568596	intron	Cyp309a2 -	chr2L	2571636	intron	Cyp309a2 -	chr2L_4_2565001	chr2L_2565001	CK1_1-HE
86	chr2L	2661194	2661231	chr2L	2663032	2663070	I-element	14	1839	4.0	3.5	3.8	2.9	1876	chr2L	2661194	intergenic	not near genes	chr2L	2662132	intergenic	not near genes	chr2L	2663070	intergenic	not near genes	chr2L_14_2660001	chr2L_2660001	CK1_1-HE
93	chr2L	2772609	2772628	chr2L	2779194	2779213	297	7	6584	1.5	5.0	3.2	1.7	6604	chr2L	2772609	3` UTR	Syt1 -	chr2L	2775911	intron	Syt1 -	chr2L	2779213	3` UTR	Syt1 -	chr2L_7_2775001	chr2L_2775001	CK1_1-HE
96	chr2L	2933298	2933322	chr2L	2935478	2935499	pogo	19	2180	10.5	15.5	13.0	1.4	2201	chr2L	2933298	intron	lilli +	chr2L	2934398	intron	lilli +	chr2L	2935499	intron	lilli +	chr2L_19_2930001	chr2L_2930001	CK1_1-HE
97	chr2L	3073029	3073054	chr2L	3078233	3078258	copia	11	5204	2.5	0.0	1.2	5.0	5229	chr2L	3073029	intron	toc -	chr2L	3075644	intron	toc -	chr2L	3078258	intron	toc -	chr2L_11_3075001	chr2L_3075001	CK1_1-HE
101	chr2L	3251499	3251526	chr2L	3259065	3259092	springer	7	7566	5.0	5.0	5.0	1.2	7593	chr2L	3251499	intergenic	not near genes	chr2L	3255296	intergenic	not near genes	chr2L	3259092	intergenic	not near genes	chr2L_7_3255001	chr2L_3255001	CK1_1-HE
110	chr2L	3388599	3388631	chr2L	3388841	3388873	pogo	10	242	4.5	6.5	5.5	1.5	274	chr2L	3388599	intergenic	CG42460 -	chr2L	3388736	intergenic	CG42460 -	chr2L	3388873	intergenic	CG42460 -,CR44791 +	chr2L_10_3385001	chr2L_3385001	CK1_1-HE
124	chr2L	3649788	3649805	chr2L	3654991	3655008	copia	11	5203	0.5	5.5	3.0	2.8	5220	chr2L	3649788	intron	for -	chr2L	3652398	intron	for -	chr2L	3655008	intron	for -	chr2L_11_3650001	chr2L_3650001	CK1_1-HE
138	chr2L	4066039	4066064	chr2L	4068865	4068890	Juan	19	2826	16.0	11.0	13.5	1.3	2851	chr2L	4066039	intron	ed +	chr2L	4067464	intron	ed +	chr2L	4068890	intron	ed +	chr2L_19_4065001	chr2L_4065001	CK1_1-HE
154	chr2L	4601705	4601736	chr2L	4609147	4609178	mdg1	8	7442	2.5	4.5	3.5	1.8	7473	chr2L	4601705	intron	dp -	chr2L	4605442	intron	dp -	chr2L	4609178	intron	dp -	chr2L_8_4605001	chr2L_4605001	CK1_1-HE
177	chr2L	5827718	5827737	chr2L	5836727	5836746	roo	7	9009	4.5	5.5	5.0	1.2	9028	chr2L	5827718	intron	TrissinR +	chr2L	5832232	intron	TrissinR +	chr2L	5836746	intron	TrissinR +	chr2L_7_5830001	chr2L_5830001	CK1_1-HE
190	chr2L	6363155	6363170	chr2L	6366078	6366093	Burdock	5	2923	3.0	1.0	2.0	1.7	2938	chr2L	6363155	intergenic	not near genes	chr2L	6364624	intergenic	not near genes	chr2L	6366093	intergenic	not near genes	chr2L_5_6360001	chr2L_6360001	CK1_1-HE
191	chr2L	6426852	6426878	chr2L	6445113	6445139	roo	4	18261	1.5	0.5	1.0	2.0	18287	chr2L	6426852	3` UTR	CG9527 -	chr2L	6435996	intron	CG9527 -	chr2L	6445139	exon	CG9527 -	chr2L_4_6435001	chr2L_6435001	CK1_1-HE
204	chr2L	6876775	6876809	chr2L	6882967	6882991	diver	14	6191	5.5	4.0	4.8	2.4	6216	chr2L	6876775	intron	Nlg2 +	chr2L	6879883	intron	Nlg2 +	chr2L	6882991	intron	Nlg2 +	chr2L_14_6875001	chr2L_6875001	CK1_1-HE
214	chr2L	7343322	7343345	chr2L	7350439	7350462	roo	12	7117	14.5	8.5	11.5	1.0	7140	chr2L	7343322	intron	Wnt6 +	chr2L	7346892	intron	Wnt6 +	chr2L	7350462	intron	Wnt6 +	chr2L_12_7345001	chr2L_7345001	CK1_1-HE
227	chr2L	7579203	7579210	chr2L	7579395	7579402	BS	4	192	4.5	1.0	2.8	1.1	199	chr2L	7579203	intergenic	RapGAP1 -	chr2L	7579302	intergenic	RapGAP1 -	chr2L	7579402	intergenic	RapGAP1 -	chr2L_4_7575001	chr2L_7575001	CK1_1-HE
244	chr2L	7959039	7959072	chr2L	7960451	7960484	pogo	12	1412	2.0	2.5	2.2	3.8	1445	chr2L	7959039	intron	Snoo -	chr2L	7959762	intron	Snoo -	chr2L	7960484	intron	Snoo -	chr2L_12_7955001	chr2L_7955001	CK1_1-HE
245	chr2L	7977077	7977113	chr2L	7984052	7984088	297	10	6975	8.5	5.5	7.0	1.2	7011	chr2L	7977077	intron	Snoo -	chr2L	7980582	intron	Snoo -	chr2L	7984088	intron,5` UTR	Snoo -,CG7231 +	chr2L_10_7980001	chr2L_7980001	CK1_1-HE
257	chr2L	8452425	8452451	chr2L	8461597	8461623	roo	13	9172	2.0	5.5	3.8	2.7	9198	chr2L	8452425	intron	fu12 -	chr2L	8457024	intron	fu12 -	chr2L	8461623	intron	fu12 -	chr2L_13_8455001	chr2L_8455001	CK1_1-HE
263	chr2L	8594462	8594471	chr2L	8601517	8601526	297	4	7055	13.0	0.0	6.5	0.5	7064	chr2L	8594462	intron,3` UTR	Sema-1a +,CR43855 -	chr2L	8597994	intron	Sema-1a +	chr2L	8601526	intron	Sema-1a +	chr2L_4_8595001	chr2L_8595001	CK1_1-HE
269	chr2L	8723112	8723148	chr2L	8731490	8731526	Tirant	19	8378	2.5	5.0	3.8	4.0	8414	chr2L	8723112	intron	raw -	chr2L	8727319	intron	raw -	chr2L	8731526	intron	raw -	chr2L_19_8725001	chr2L_8725001	CK1_1-HE
273	chr2L	9000276	9000296	chr2L	9007787	9007807	roo	7	7511	6.5	2.5	4.5	1.3	7531	chr2L	9000276	intergenic	Try29F +	chr2L	9004042	intergenic	not near genes	chr2L	9007807	intergenic	not near genes	chr2L_7_9000001	chr2L_9000001	CK1_1-HE
281	chr2L	9217984	9217993	chr2L	9222782	9222791	Doc	11	4798	17.5	0.0	8.8	1.1	4807	chr2L	9217984	intron	tai +	chr2L	9220388	intron	tai +	chr2L	9222791	intron	tai +	chr2L_11_9220001	chr2L_9220001	CK1_1-HE
304	chr2L	9973724	9973758	chr2L	9980844	9980878	HMS-Beagle	10	7120	2.0	4.0	3.0	2.5	7154	chr2L	9973724	intergenic	not near genes	chr2L	9977301	intergenic	not near genes	chr2L	9980878	intergenic	not near genes	chr2L_10_9975001	chr2L_9975001	CK1_1-HE
310	chr2L	10156321	10156355	chr2L	10163792	10163826	blood	11	7471	4.0	3.0	3.5	2.4	7505	chr2L	10156321	intron,3` UTR	CG44153 -,CG4839 +	chr2L	10160074	intron	CG44153 -	chr2L	10163826	intron	CG44153 -	chr2L_11_10160001	chr2L_10160001	CK1_1-HE
323	chr2L	10592839	10592875	chr2L	10600502	10600538	opus	19	7663	5.5	8.0	6.8	2.4	7699	chr2L	10592839	intron	Trim9 +	chr2L	10596688	intron	Trim9 +	chr2L	10600538	intron	Trim9 +	chr2L_19_10595001	chr2L_10595001	CK1_1-HE
332	chr2L	10862839	10862869	chr2L	10864454	10864484	Rt1c	9	1615	2.0	1.0	1.5	3.6	1645	chr2L	10862839	3` UTR	CR43807 -	chr2L	10863662	intron	CR43807 -	chr2L	10864484	3` UTR	CR43807 -	chr2L_9_10860001	chr2L_10860001	CK1_1-HE
337	chr2L	10946951	10946974	chr2L	10956167	10956190	roo	20	9216	6.5	13.5	10.0	1.8	9239	chr2L	10946951	intron	dpr2 -	chr2L	10951570	intron	dpr2 -	chr2L	10956190	intron	dpr2 -	chr2L_20_10950001	chr2L_10950001	CK1_1-HE
356	chr2L	11540580	11540616	chr2L	11547983	11548019	Tabor	14	7403	6.5	7.5	7.0	1.8	7439	chr2L	11540580	intergenic	not near genes	chr2L	11544300	intergenic	not near genes	chr2L	11548019	intergenic	not near genes	chr2L_14_11540001	chr2L_11540001	CK1_1-HE
357	chr2L	11563635	11563668	chr2L	11568840	11568873	copia	14	5205	3.5	5.5	4.5	2.5	5238	chr2L	11563635	intergenic	not near genes	chr2L	11566254	intergenic	not near genes	chr2L	11568873	intergenic	not near genes	chr2L_14_11565001	chr2L_11565001	CK1_1-HE
358	chr2L	11614049	11614083	chr2L	11615545	11615579	hopper2	10	1496	2.5	4.5	3.5	2.2	1530	chr2L	11614049	intron	kek2 +	chr2L	11614814	intron	kek2 +	chr2L	11615579	intron	kek2 +	chr2L_10_11610001	chr2L_11610001	CK1_1-HE
361	chr2L	11713507	11713531	chr2L	11720976	11721000	blood	10	7469	3.5	2.5	3.0	2.5	7493	chr2L	11713507	intergenic	not near genes	chr2L	11717254	intergenic	not near genes	chr2L	11721000	intergenic	CR44143 +	chr2L_10_11715001	chr2L_11715001	CK1_1-HE
395	chr2L	12558321	12558353	chr2L	12565451	12565483	HMS-Beagle	10	7130	3.0	7.0	5.0	1.7	7162	chr2L	12558321	intergenic	not near genes	chr2L	12561902	intergenic	not near genes	chr2L	12565483	intergenic	not near genes	chr2L_10_12560001	chr2L_12560001	CK1_1-HE
402	chr2L	12728920	12728947	chr2L	12729162	12729189	pogo	25	242	6.5	8.0	7.2	3.0	269	chr2L	12728920	intron	MRP +	chr2L	12729054	intron	MRP +	chr2L	12729189	exon	MRP +	chr2L_25_12725001	chr2L_12725001	CK1_1-HE
403	chr2L	12731054	12731087	chr2L	12735822	12735855	F-element	6	4768	6.0	2.5	4.2	1.2	4801	chr2L	12731054	intron	MRP +	chr2L	12733454	intron	MRP +	chr2L	12735855	intron	MRP +	chr2L_6_12730001	chr2L_12730001	CK1_1-HE
405	chr2L	12739174	12739201	chr2L	12743956	12743983	Doc	9	4782	1.5	4.5	3.0	2.2	4809	chr2L	12739174	exon	MRP +	chr2L	12741578	intron	MRP +	chr2L	12743983	exon	MRP +	chr2L_9_12740001	chr2L_12740001	CK1_1-HE
406	chr2L	12763863	12763872	chr2L	12764064	12764073	BS	9	201	0.0	5.0	2.5	2.6	210	chr2L	12763863	intergenic	not near genes	chr2L	12763968	intergenic	not near genes	chr2L	12764073	intergenic	not near genes	chr2L_9_12760001	chr2L_12760001	CK1_1-HE
408	chr2L	12781795	12781815	chr2L	12789246	12789266	Quasimodo	20	7451	29.0	13.0	21.0	0.9	7471	chr2L	12781795	intergenic	not near genes	chr2L	12785530	intergenic	not near genes	chr2L	12789266	intergenic	not near genes	chr2L_20_12785001	chr2L_12785001	CK1_1-HE
409	chr2L	12791602	12791633	chr2L	12795276	12795309	F-element	36	3676	15.0	7.5	11.2	3.0	3707	chr2L	12791602	intergenic	not near genes	chr2L	12793456	intergenic	not near genes	chr2L	12795309	intergenic	not near genes	chr2L_36_12790001	chr2L_12790001	CK1_1-HE
412	chr2L	12894019	12894048	chr2L	12895487	12895516	hobo	16	1468	1.5	5.0	3.2	3.8	1497	chr2L	12894019	intergenic	not near genes	chr2L	12894768	intergenic	not near genes	chr2L	12895516	intergenic	not near genes	chr2L_16_12890001	chr2L_12890001	CK1_1-HE
414	chr2L	12933847	12933877	chr2L	12941315	12941345	blood	11	7468	5.0	4.5	4.8	1.9	7498	chr2L	12933847	intergenic	not near genes	chr2L	12937596	intergenic	not near genes	chr2L	12941345	intergenic	not near genes	chr2L_11_12935001	chr2L_12935001	CK1_1-HE
418	chr2L	13036240	13036274	chr2L	13036483	13036517	X-element	17	243	5.5	0.5	3.0	4.2	277	chr2L	13036240	intron	CG9932 -	chr2L	13036378	intron	CG9932 -	chr2L	13036517	intron	CG9932 -	chr2L_17_13035001	chr2L_13035001	CK1_1-HE
420	chr2L	13405646	13405651	chr2L	13410444	13410449	Doc	5	4798	7.5	1.0	4.2	1.0	4803	chr2L	13405646	exon	CG7110 +	chr2L	13408048	intron	CG7110 +	chr2L	13410449	intron	CG7110 +	chr2L_5_13405001	chr2L_13405001	CK1_1-HE
421	chr2L	13481448	13481478	chr2L	13482056	13482086	jockey	34	608	16.5	21.0	18.8	1.7	638	chr2L	13481448	intron	CG42784 +	chr2L	13481767	intron	CG42784 +	chr2L	13482086	intron	CG42784 +	chr2L_34_13480001	chr2L_13480001	CK1_1-HE
423	chr2L	13560392	13560421	chr2L	13565214	13565243	F-element	21	4822	9.5	7.5	8.5	2.2	4851	chr2L	13560392	intron	kuz +	chr2L	13562818	intron	kuz +	chr2L	13565243	intron	kuz +	chr2L_21_13560001	chr2L_13560001	CK1_1-HE
430	chr2L	13761810	13761830	chr2L	13762922	13762942	Doc	5	1112	6.5	3.5	5.0	0.8	1132	chr2L	13761810	intron	TM9SF4 +	chr2L	13762376	intron	TM9SF4 +	chr2L	13762942	intron	TM9SF4 +	chr2L_5_13760001	chr2L_13760001	CK1_1-HE
431	chr2L	13853089	13853116	chr2L	13862240	13862267	roo	24	9151	6.5	9.0	7.8	2.7	9178	chr2L	13853089	intron	CenG1A +	chr2L	13857678	intron	CenG1A +	chr2L	13862267	intron	CenG1A +	chr2L_24_13855001	chr2L_13855001	CK1_1-HE
446	chr2L	14642567	14642574	chr2L	14651731	14651738	roo	6	9164	10.5	0.0	5.2	1.0	9171	chr2L	14642567	intron	osp -	chr2L	14647152	intron	osp -	chr2L	14651738	intron	osp -	chr2L_6_14645001	chr2L_14645001	CK1_1-HE
454	chr2L	14803877	14803913	chr2L	14809081	14809117	copia	9	5204	4.0	5.5	4.8	1.6	5240	chr2L	14803877	intergenic	not near genes	chr2L	14806497	intergenic	not near genes	chr2L	14809117	intergenic	not near genes	chr2L_9_14805001	chr2L_14805001	CK1_1-HE
456	chr2L	14889950	14889988	chr2L	14890376	14890414	jockey	26	426	5.0	5.0	5.0	4.3	464	chr2L	14889950	intergenic	not near genes	chr2L	14890182	intergenic	not near genes	chr2L	14890414	intergenic	not near genes	chr2L_26_14890001	chr2L_14890001	CK1_1-HE
461	chr2L	14984381	14984405	chr2L	14991984	14992008	opus	14	7603	7.5	6.0	6.8	1.8	7627	chr2L	14984381	intron	mol -	chr2L	14988194	intron	mol -	chr2L	14992008	intron	mol -	chr2L_14_14985001	chr2L_14985001	CK1_1-HE
474	chr2L	15446052	15446084	chr2L	15453522	15453554	blood	7	7470	3.0	5.0	4.0	1.4	7502	chr2L	15446052	intergenic	not near genes	chr2L	15449803	intergenic	not near genes	chr2L	15453554	intergenic	not near genes	chr2L_7_15445001	chr2L_15445001	CK1_1-HE
490	chr2L	15956021	15956057	chr2L	15957489	15957525	hobo	14	1468	9.5	9.0	9.2	1.4	1504	chr2L	15956021	intron	beat-Ib -	chr2L	15956773	intron	beat-Ib -	chr2L	15957525	intron	beat-Ib -	chr2L_14_15955001	chr2L_15955001	CK1_1-HE
496	chr2L	16141148	16141191	chr2L	16146370	16146399	copia	10	5211	0.0	5.5	2.8	2.6	5251	chr2L	16141148	intergenic	not near genes	chr2L	16143774	intergenic	not near genes	chr2L	16146399	intergenic	not near genes	chr2L_10_16140001	chr2L_16140001	CK1_1-HE
498	chr2L	16153741	16153762	chr2L	16160810	16160831	297	16	7069	6.0	5.0	5.5	2.5	7090	chr2L	16153741	intergenic	not near genes	chr2L	16157286	intergenic	not near genes	chr2L	16160831	intergenic	not near genes	chr2L_16_16155001	chr2L_16155001	CK1_1-HE
502	chr2L	16280253	16280286	chr2L	16281425	16281458	1360	21	1171	2.0	4.5	3.2	5.0	1205	chr2L	16280253	intron	crp -	chr2L	16280856	intron	crp -	chr2L	16281458	intron	crp -	chr2L_21_16280001	chr2L_16280001	CK1_1-HE
508	chr2L	16511986	16511996	chr2L	16519114	16519124	HMS-Beagle	7	7128	4.5	5.5	5.0	1.2	7138	chr2L	16511986	intron	CG5953 -	chr2L	16515555	intron	CG5953 -	chr2L	16519124	intron	CG5953 -	chr2L_7_16515001	chr2L_16515001	CK1_1-HE
530	chr2L	16958103	16958136	chr2L	16962892	16962925	Doc	35	4789	8.0	9.5	8.8	3.6	4822	chr2L	16958103	intergenic	not near genes	chr2L	16960514	intergenic	not near genes	chr2L	16962925	intergenic	not near genes	chr2L_35_16960001	chr2L_16960001	CK1_1-HE
546	chr2L	17167563	17167593	chr2L	17167805	17167835	pogo	20	242	10.0	6.0	8.0	2.2	272	chr2L	17167563	intron,intron	CG34106 +,beat-IIIa +	chr2L	17167699	intron,intron	CG34106 +,beat-IIIa +	chr2L	17167835	intron,intron	CG34106 +,beat-IIIa +	chr2L_20_17165001	chr2L_17165001	CK1_1-HE
548	chr2L	17199161	17199191	chr2L	17200629	17200659	hobo	19	1468	8.5	6.5	7.5	2.2	1498	chr2L	17199161	intron	beat-IIIc -	chr2L	17199910	intron	beat-IIIc -	chr2L	17200659	intron	beat-IIIc -	chr2L_19_17195001	chr2L_17195001	CK1_1-HE
551	chr2L	17273189	17273226	chr2L	17277973	17278010	F-element	34	4784	5.0	8.5	6.8	4.4	4821	chr2L	17273189	intergenic	not near genes	chr2L	17275600	intergenic	not near genes	chr2L	17278010	intergenic	not near genes	chr2L_34_17275001	chr2L_17275001	CK1_1-HE
553	chr2L	17335547	17335578	chr2L	17336714	17336745	1360	13	1165	3.0	6.0	4.5	2.4	1198	chr2L	17335547	intergenic	not near genes	chr2L	17336146	intergenic	not near genes	chr2L	17336745	intergenic	not near genes	chr2L_13_17335001	chr2L_17335001	CK1_1-HE
560	chr2L	17432020	17432031	chr2L	17432128	17432139	1360	7	108	0.0	7.0	3.5	1.6	119	chr2L	17432020	intron	Dif -	chr2L	17432080	intron	Dif -	chr2L	17432139	intron	Dif -	chr2L_7_17430001	chr2L_17430001	CK1_1-HE
571	chr2L	17687515	17687521	chr2L	17692261	17692267	F-element	6	4746	11.5	10.0	10.8	0.5	4752	chr2L	17687515	intron	CadN -	chr2L	17689891	intron	CadN -	chr2L	17692267	intron	CadN -	chr2L_6_17685001	chr2L_17685001	CK1_1-HE
573	chr2L	17727867	17727881	chr2L	17729335	17729349	hobo	17	1467	8.0	23.5	15.8	1.0	1482	chr2L	17727867	intron	CadN -	chr2L	17728608	intron	CadN -	chr2L	17729349	intron	CadN -	chr2L_17_17725001	chr2L_17725001	CK1_1-HE
577	chr2L	17819921	17819956	chr2L	17825125	17825160	copia	20	5203	3.5	7.0	5.2	3.2	5239	chr2L	17819921	intron	CadN2 -	chr2L	17822540	intron	CadN2 -	chr2L	17825160	intron	CadN2 -	chr2L_20_17820001	chr2L_17820001	CK1_1-HE
580	chr2L	17911956	17911990	chr2L	17914135	17914169	pogo	18	2179	5.5	4.5	5.0	3.0	2213	chr2L	17911956	intergenic	not near genes	chr2L	17913062	intergenic	not near genes	chr2L	17914169	intergenic	CG43271 -	chr2L_18_17910001	chr2L_17910001	CK1_1-HE
582	chr2L	17951947	17951979	chr2L	17953415	17953447	hobo	9	1468	5.0	12.5	8.8	0.9	1500	chr2L	17951947	intergenic	CR44398 -,CR44397 -	chr2L	17952697	intergenic	not near genes	chr2L	17953447	intergenic	not near genes	chr2L_9_17950001	chr2L_17950001	CK1_1-HE
586	chr2L	18051873	18051907	chr2L	18061020	18061055	roo	27	9148	5.5	4.5	5.0	4.5	9182	chr2L	18051873	intron	rdo +	chr2L	18056464	intron	rdo +	chr2L	18061055	intron	rdo +	chr2L_27_18055001	chr2L_18055001	CK1_1-HE
596	chr2L	18408021	18408056	chr2L	18412806	18412841	Doc	24	4785	10.0	0.0	5.0	4.0	4820	chr2L	18408021	intergenic	not near genes	chr2L	18410431	intergenic	not near genes	chr2L	18412841	intergenic	not near genes	chr2L_24_18410001	chr2L_18410001	CK1_1-HE
615	chr2L	19147367	19147401	chr2L	19154403	19154437	297	28	7036	7.5	14.0	10.8	2.4	7070	chr2L	19147367	intron	brat +	chr2L	19150902	intron	brat +	chr2L	19154437	intron	brat +	chr2L_28_19150001	chr2L_19150001	CK1_1-HE
620	chr2L	19345018	19345046	chr2L	19357228	19357256	blood	13	12210	5.0	5.5	5.2	2.1	12238	chr2L	19345018	intron	dnt -	chr2L	19351137	intron	dnt -	chr2L	19357256	intron	dnt -	chr2L_13_19350001	chr2L_19350001	CK1_1-HE
630	chr2L	19620088	19620131	chr2L	19621078	19621121	jockey	46	989	17.0	6.5	11.8	3.6	1033	chr2L	19620088	intron	Lar +	chr2L	19620604	intron	Lar +	chr2L	19621121	intron	Lar +	chr2L_46_19620001	chr2L_19620001	CK1_1-HE
632	chr2L	19652574	19652597	chr2L	19674011	19674034	opus	19	21437	5.5	5.0	5.2	3.1	21460	chr2L	19652574	intron	Lar +	chr2L	19663304	intron	Lar +	chr2L	19674034	intron	Lar +	chr2L_19_19660001	chr2L_19660001	CK1_1-HE
633	chr2L	19703536	19703570	chr2L	19712673	19712707	roo	14	9137	7.5	10.0	8.8	1.4	9171	chr2L	19703536	intron	Lar +	chr2L	19708122	intron	Lar +	chr2L	19712707	intron	Lar +	chr2L_14_19705001	chr2L_19705001	CK1_1-HE
634	chr2L	19737353	19737388	chr2L	19740822	19740858	1360	8	3468	2.5	3.0	2.8	2.1	3505	chr2L	19737353	intergenic	Nf-YB +	chr2L	19739106	intergenic	not near genes	chr2L	19740858	intergenic	not near genes	chr2L_8_19735001	chr2L_19735001	CK1_1-HE
635	chr2L	19762806	19762830	chr2L	19763049	19763073	pogo	7	243	4.0	0.0	2.0	2.3	267	chr2L	19762806	5` UTR	fbp -	chr2L	19762940	intron	fbp -	chr2L	19763073	intron	fbp -	chr2L_7_19760001	chr2L_19760001	CK1_1-HE
645	chr2L	20005869	20005888	chr2L	20010946	20010965	flea	12	5077	8.0	3.0	5.5	1.8	5096	chr2L	20005869	intron	CG43861 -	chr2L	20008417	intron	CG43861 -	chr2L	20010965	intron	CG43861 -	chr2L_12_20005001	chr2L_20005001	CK1_1-HE
650	chr2L	20272109	20272142	chr2L	20282821	20282854	copia	15	10712	5.0	4.0	4.5	2.7	10745	chr2L	20272109	intergenic	not near genes	chr2L	20277482	intergenic	not near genes	chr2L	20282854	intergenic	not near genes	chr2L_15_20275001	chr2L_20275001	CK1_1-HE
653	chr2L	20303164	20303191	chr2L	20310633	20310660	blood	10	7469	0.5	5.0	2.8	2.6	7496	chr2L	20303164	intergenic	not near genes	chr2L	20306912	intergenic	not near genes	chr2L	20310660	intergenic	not near genes	chr2L_10_20305001	chr2L_20305001	CK1_1-HE
661	chr2L	20568667	20568687	chr2L	20569058	20569078	X-element	11	391	3.5	2.5	3.0	2.8	411	chr2L	20568667	intron	CR45347 +	chr2L	20568872	intron	CR45347 +	chr2L	20569078	intron	CR45347 +	chr2L_11_20565001	chr2L_20565001	CK1_1-HE
662	chr2L	20576218	20576241	chr2L	20583687	20583710	blood	5	7469	5.0	2.0	3.5	1.1	7492	chr2L	20576218	intergenic	CR45347 +	chr2L	20579964	intergenic	not near genes	chr2L	20583710	3` UTR	CR44909 -	chr2L_5_20575001	chr2L_20575001	CK1_1-HE
674	chr2L	20835805	20835835	chr2L	20836523	20836553	Quasimodo	15	718	7.0	3.0	5.0	2.5	748	chr2L	20835805	5` UTR	Oseg5 -	chr2L	20836179	intergenic	Oseg5 -,Spn38F -	chr2L	20836553	intergenic	Spn38F -	chr2L_15_20835001	chr2L_20835001	CK1_1-HE
675	chr2L	20891536	20891546	chr2L	20896638	20896648	jockey	4	5102	5.0	5.0	5.0	0.7	5112	chr2L	20891536	intron,intron	CG43739 -,sky -	chr2L	20894092	intron,intron	CG43739 -,sky -	chr2L	20896648	intron,intron	CG43739 -,sky -	chr2L_4_20890001	chr2L_20890001	CK1_1-HE
677	chr2L	20976643	20976677	chr2L	20981459	20981493	X-element	20	4816	7.5	7.0	7.2	2.4	4850	chr2L	20976643	intron	CG42238 -	chr2L	20979068	intron	CG42238 -	chr2L	20981493	intron	CG42238 -	chr2L_20_20975001	chr2L_20975001	CK1_1-HE
678	chr2L	21020271	21020311	chr2L	21023949	21023989	NOF	40	3677	7.5	8.0	7.8	4.5	3718	chr2L	21020271	intron	CG42238 -	chr2L	21022130	intron	CG42238 -	chr2L	21023989	intron	CG42238 -	chr2L_40_21020001	chr2L_21020001	CK1_1-HE
679	chr2L	21041132	21041167	chr2L	21049394	21049429	Tirant	36	8262	9.0	4.0	6.5	4.8	8297	chr2L	21041132	intron	CG42238 -	chr2L	21045280	intron	CG42238 -	chr2L	21049429	intron	CG42238 -	chr2L_36_21045001	chr2L_21045001	CK1_1-HE
686	chr2L	21347551	21347578	chr2L	21355024	21355051	blood	13	7473	6.0	6.0	6.0	1.9	7500	chr2L	21347551	intron	Tsp39D +	chr2L	21351301	intron	Tsp39D +	chr2L	21355051	intron	Tsp39D +	chr2L_13_21350001	chr2L_21350001	CK1_1-HE
688	chr2L	21597027	21597063	chr2L	21604772	21604808	roo	27	7745	5.0	6.5	5.8	4.0	7781	chr2L	21597027	intergenic	not near genes	chr2L	21600918	intergenic	not near genes	chr2L	21604808	intergenic	not near genes	chr2L_27_21600001	chr2L_21600001	CK1_1-HE
690	chr2L	21653190	21653224	chr2L	21656494	21656529	invader4	15	3305	6.0	7.0	6.5	2.0	3339	chr2L	21653190	intergenic	not near genes	chr2L	21654860	intergenic	not near genes	chr2L	21656529	intergenic	not near genes	chr2L_15_21650001	chr2L_21650001	CK1_1-HE
691	chr2L	21691831	21691856	chr2L	21698302	21698327	Burdock	19	6471	4.5	0.5	2.5	5.4	6496	chr2L	21691831	intron	CG31619 +	chr2L	21695079	intron	CG31619 +	chr2L	21698327	intron	CG31619 +	chr2L_19_21695001	chr2L_21695001	CK1_1-HE
703	chr2L	21981682	21981715	chr2L	21990848	21990881	roo	17	9166	4.0	6.0	5.0	2.8	9199	chr2L	21981682	exon	CG2528 -	chr2L	21986282	intron	CG2528 -	chr2L	21990881	exon	CG2528 -	chr2L_17_21985001	chr2L_21985001	CK1_1-HE
716	chr2L	22258614	22258647	chr2L	22260739	22260772	G6	20	2125	7.5	8.5	8.0	2.2	2158	chr2L	22258614	intergenic	Tif-IA +	chr2L	22259693	intergenic	not near genes	chr2L	22260772	intergenic	not near genes	chr2L_20_22255001	chr2L_22255001	CK1_1-HE
717	chr2L	22581969	22582000	chr2L	22583759	22583790	S-element	6	1790	3.0	1.5	2.2	1.9	1821	chr2L	22581969	intron	CG17494 +	chr2L	22582880	intron	CG17494 +	chr2L	22583790	intron	CG17494 +	chr2L_6_22580001	chr2L_22580001	CK1_1-HE
718	chr2L	22679806	22679828	chr2L	22684579	22684601	F-element	9	4773	1.5	4.5	3.0	2.2	4795	chr2L	22679806	intron	CG40006 -	chr2L	22682204	intron	CG40006 -	chr2L	22684601	intron	CG40006 -	chr2L_9_22680001	chr2L_22680001	CK1_1-HE
720	chr2L	22776418	22776450	chr2L	22778208	22778240	S-element	13	1790	3.0	2.0	2.5	3.7	1822	chr2L	22776418	intergenic	not near genes	chr2L	22777329	intergenic	not near genes	chr2L	22778240	intergenic	not near genes	chr2L_13_22775001	chr2L_22775001	CK1_1-HE
724	chr2R	469957	469978	chr2R	473199	473220	F-element	8	3242	3.5	1.0	2.2	2.5	3263	chr2R	469957	intergenic	not near genes	chr2R	471588	intergenic	not near genes	chr2R	473220	intergenic	not near genes	chr2R_8_470001	chr2R_470001	CK1_1-HE
725	chr2R	529320	529357	chr2R	537946	537983	Max-element	13	8626	2.5	3.5	3.0	3.2	8663	chr2R	529320	intron	CG40378 +	chr2R	533652	intron	CG40378 +	chr2R	537983	intron	CG40378 +	chr2R_13_530001	chr2R_530001	CK1_1-HE
726	chr2R	552751	552786	chr2R	553970	554005	1360	34	1218	8.0	10.0	9.0	3.4	1254	chr2R	552751	intron	CG40378 +	chr2R	553378	intron	CG40378 +	chr2R	554005	intron	CG40378 +	chr2R_34_550001	chr2R_550001	CK1_1-HE
729	chr2R	1082365	1082383	chr2R	1087142	1087160	Doc	6	4777	5.0	5.0	5.0	1.0	4795	chr2R	1082365	intron	rl +	chr2R	1084762	intron	rl +	chr2R	1087160	intron	rl +	chr2R_6_1080001	chr2R_1080001	CK1_1-HE
737	chr2R	2498984	2499016	chr2R	2508132	2508164	roo	15	9148	7.0	3.5	5.2	2.4	9180	chr2R	2498984	intron	MFS17 -	chr2R	2503574	intron	MFS17 -	chr2R	2508164	intron	MFS17 -	chr2R_15_2500001	chr2R_2500001	CK1_1-HE
739	chr2R	2856609	2856624	chr2R	2857033	2857048	297	9	424	4.5	5.5	5.0	1.5	439	chr2R	2856609	intergenic	not near genes	chr2R	2856828	intergenic	not near genes	chr2R	2857048	intergenic	not near genes	chr2R_9_2855001	chr2R_2855001	CK1_1-HE
740	chr2R	2875382	2875394	chr2R	2878897	2878910	HMS-Beagle	9	3515	34.0	52.5	43.2	0.2	3528	chr2R	2875382	intergenic	not near genes	chr2R	2877146	intergenic	not near genes	chr2R	2878910	intergenic	not near genes	chr2R_9_2875001	chr2R_2875001	CK1_1-HE
748	chr2R	4622950	4622987	chr2R	4624110	4624147	1360	18	1160	5.5	8.5	7.0	2.2	1197	chr2R	4622950	intergenic	CR44101 -	chr2R	4623548	intergenic	not near genes	chr2R	4624147	intergenic	not near genes	chr2R_18_4620001	chr2R_4620001	CK1_1-HE
751	chr2R	4838869	4838888	chr2R	4840393	4840412	transib2	11	1524	11.0	8.0	9.5	1.0	1543	chr2R	4838869	intergenic	not near genes	chr2R	4839640	intergenic	not near genes	chr2R	4840412	intergenic	not near genes	chr2R_11_4835001	chr2R_4835001	CK1_1-HE
763	chr2R	5417993	5418023	chr2R	5420626	5420656	Burdock	8	2633	3.5	3.0	3.2	1.9	2663	chr2R	5417993	intron	laccase2 +	chr2R	5419324	intron	laccase2 +	chr2R	5420656	intron	laccase2 +	chr2R_8_5415001	chr2R_5415001	CK1_1-HE
770	chr2R	5543198	5543223	chr2R	5547283	5547308	invader1	13	4085	0.0	2.5	1.2	5.9	4110	chr2R	5543198	intron	CG30438 +	chr2R	5545253	intron	CG30438 +	chr2R	5547308	intron	CG30438 +	chr2R_13_5545001	chr2R_5545001	CK1_1-HE
779	chr2R	5869273	5869309	chr2R	5874350	5874386	flea	16	5077	4.0	4.0	4.0	3.2	5113	chr2R	5869273	intergenic	not near genes	chr2R	5871830	intergenic	not near genes	chr2R	5874386	intergenic	not near genes	chr2R_16_5870001	chr2R_5870001	CK1_1-HE
783	chr2R	5902156	5902185	chr2R	5909716	5909745	17.6	11	7560	1.0	5.0	3.0	2.8	7589	chr2R	5902156	intron	CG43366 +	chr2R	5905950	intron	CG43366 +	chr2R	5909745	intron	CG43366 +	chr2R_11_5905001	chr2R_5905001	CK1_1-HE
794	chr2R	6096713	6096751	chr2R	6101912	6101944	BS	24	5198	7.5	9.0	8.2	2.6	5231	chr2R	6096713	intron	EcR -	chr2R	6099328	intron	EcR -	chr2R	6101944	intron	EcR -	chr2R_24_6095001	chr2R_6095001	CK1_1-HE
807	chr2R	6494525	6494555	chr2R	6499288	6499318	F-element	19	4763	4.5	5.0	4.8	3.3	4793	chr2R	6494525	intergenic	not near genes	chr2R	6496922	intergenic	not near genes	chr2R	6499318	intergenic	not near genes	chr2R_19_6495001	chr2R_6495001	CK1_1-HE
810	chr2R	6579771	6579806	chr2R	6584858	6584893	flea	17	5087	2.5	6.0	4.2	3.3	5122	chr2R	6579771	intron	jing +	chr2R	6582332	intron	jing +	chr2R	6584893	intron	jing +	chr2R_17_6580001	chr2R_6580001	CK1_1-HE
827	chr2R	7235819	7235849	chr2R	7240912	7240942	jockey	6	5093	2.0	1.0	1.5	2.4	5123	chr2R	7235819	intergenic	not near genes	chr2R	7238380	intergenic	not near genes	chr2R	7240942	intergenic	not near genes	chr2R_6_7235001	chr2R_7235001	CK1_1-HE
833	chr2R	7608406	7608433	chr2R	7613610	7613637	I-element	12	5204	4.0	0.0	2.0	4.0	5231	chr2R	7608406	intron	CG1358 -	chr2R	7611022	intron	CG1358 -	chr2R	7613637	intron	CG1358 -	chr2R_12_7610001	chr2R_7610001	CK1_1-HE
841	chr2R	7869191	7869214	chr2R	7873978	7874001	Doc	8	4786	5.0	4.0	4.5	1.5	4810	chr2R	7869191	intron	Dgk -	chr2R	7871596	intron	Dgk -	chr2R	7874001	intron	Dgk -	chr2R_8_7870001	chr2R_7870001	CK1_1-HE
852	chr2R	8160936	8160952	chr2R	8161027	8161043	1360	7	91	2.5	8.5	5.5	1.1	107	chr2R	8160936	intron	CG8708 -	chr2R	8160990	intron	CG8708 -	chr2R	8161043	intron	CG8708 -	chr2R_7_8160001	chr2R_8160001	CK1_1-HE
856	chr2R	8330860	8330892	chr2R	8331347	8331379	roo	14	487	4.5	8.5	6.5	1.9	519	chr2R	8330860	intron	pdm3 +	chr2R	8331120	intron	pdm3 +	chr2R	8331379	intron	pdm3 +	chr2R_14_8330001	chr2R_8330001	CK1_1-HE
857	chr2R	8398207	8398243	chr2R	8402989	8403025	Doc	19	4782	1.0	3.5	2.2	5.9	4818	chr2R	8398207	intron	CG2121 -	chr2R	8400616	intron	CG2121 -	chr2R	8403025	intron	CG2121 -	chr2R_19_8400001	chr2R_8400001	CK1_1-HE
868	chr2R	8566030	8566061	chr2R	8566983	8567014	1360	6	953	4.0	2.0	3.0	1.5	984	chr2R	8566030	5` UTR	Cyp6a14 -	chr2R	8566522	5` UTR	Cyp6a14 -	chr2R	8567014	5` UTR	Cyp6a14 -	chr2R_6_8565001	chr2R_8565001	CK1_1-HE
874	chr2R	8722761	8722786	chr2R	8723003	8723028	pogo	11	242	7.0	3.0	5.0	1.8	267	chr2R	8722761	intron	CG14767 -	chr2R	8722894	intron	CG14767 -	chr2R	8723028	intron	CG14767 -	chr2R_11_8720001	chr2R_8720001	CK1_1-HE
877	chr2R	8777929	8777946	chr2R	8784134	8784151	diver	15	6205	0.0	7.0	3.5	3.3	6222	chr2R	8777929	intergenic	not near genes	chr2R	8781040	intergenic	not near genes	chr2R	8784151	intergenic	not near genes	chr2R_15_8780001	chr2R_8780001	CK1_1-HE
886	chr2R	9151302	9151330	chr2R	9157773	9157801	Burdock	5	6471	2.0	2.5	2.2	1.6	6499	chr2R	9151302	exon	CG30345 +	chr2R	9154552	intergenic	not near genes	chr2R	9157801	intergenic	CG8008 -	chr2R_5_9150001	chr2R_9150001	CK1_1-HE
888	chr2R	9212695	9212721	chr2R	9213182	9213208	roo	5	487	2.5	3.5	3.0	1.2	513	chr2R	9212695	intergenic	CR45309 +	chr2R	9212952	intergenic	CR45309 +	chr2R	9213208	5` UTR	CR45309 +	chr2R_5_9210001	chr2R_9210001	CK1_1-HE
901	chr2R	9480077	9480109	chr2R	9490609	9490641	roo	5	10532	4.5	6.0	5.2	0.8	10564	chr2R	9480077	intergenic	not near genes	chr2R	9485359	intergenic	not near genes	chr2R	9490641	intergenic	not near genes	chr2R_5_9485001	chr2R_9485001	CK1_1-HE
903	chr2R	9726609	9726641	chr2R	9734163	9734195	17.6	7	7554	4.5	7.0	5.8	1.0	7586	chr2R	9726609	intron	sqa -	chr2R	9730402	intron	sqa -	chr2R	9734195	intron	sqa -	chr2R_7_9730001	chr2R_9730001	CK1_1-HE
904	chr2R	9871040	9871074	chr2R	9871527	9871561	roo	18	487	5.0	10.5	7.8	2.0	521	chr2R	9871040	intron	cbx -	chr2R	9871300	intron	cbx -	chr2R	9871561	intron,5` UTR	cbx -,CG18446 +	chr2R_18_9870001	chr2R_9870001	CK1_1-HE
905	chr2R	9945432	9945468	chr2R	9945629	9945665	BS	36	197	7.0	7.5	7.2	4.4	233	chr2R	9945432	intron	Mef2 -	chr2R	9945548	intron	Mef2 -	chr2R	9945665	intron	Mef2 -	chr2R_36_9945001	chr2R_9945001	CK1_1-HE
908	chr2R	10005848	10005881	chr2R	10007014	10007047	1360	18	1165	5.5	5.5	5.5	2.8	1199	chr2R	10005848	intron	Pka-R2 -	chr2R	10006448	intron	Pka-R2 -	chr2R	10007047	intron	Pka-R2 -	chr2R_18_10005001	chr2R_10005001	CK1_1-HE
913	chr2R	10176878	10176903	chr2R	10186047	10186072	roo	22	9169	14.0	7.5	10.8	1.9	9194	chr2R	10176878	intron	KCNQ -	chr2R	10181475	intron	KCNQ -	chr2R	10186072	intron	KCNQ -	chr2R_22_10180001	chr2R_10180001	CK1_1-HE
931	chr2R	10585573	10585589	chr2R	10594157	10594173	Tirant	19	8584	14.0	19.5	16.8	1.1	8600	chr2R	10585573	intron	psq +	chr2R	10589873	intron	psq +	chr2R	10594173	intron	psq +	chr2R_19_10585001	chr2R_10585001	CK1_1-HE
933	chr2R	10622349	10622355	chr2R	10637115	10637121	mdg1	4	14766	3.5	0.5	2.0	1.3	14772	chr2R	10622349	intron	CG11883 +	chr2R	10629735	intron	CG11883 +	chr2R	10637121	intron	CG11883 +	chr2R_4_10625001	chr2R_10625001	CK1_1-HE
941	chr2R	10948037	10948060	chr2R	10955586	10955608	17.6	8	7549	0.0	6.5	3.2	1.9	7571	chr2R	10948037	intergenic	not near genes	chr2R	10951822	intergenic	not near genes	chr2R	10955608	intergenic	not near genes	chr2R_8_10950001	chr2R_10950001	CK1_1-HE
944	chr2R	10979660	10979684	chr2R	10980133	10980150	297	8	472	0.5	3.0	1.8	2.9	490	chr2R	10979660	intergenic	not near genes	chr2R	10979905	intergenic	not near genes	chr2R	10980150	intergenic	not near genes	chr2R_8_10975001	chr2R_10975001	CK1_1-HE
945	chr2R	11009813	11009847	chr2R	11018988	11019021	roo	22	9175	5.0	5.5	5.2	3.5	9208	chr2R	11009813	intron	luna -	chr2R	11014417	intron	luna -	chr2R	11019021	intron	luna -	chr2R_22_11010001	chr2R_11010001	CK1_1-HE
946	chr2R	11019876	11019907	chr2R	11024943	11024974	jockey	19	5067	4.5	3.5	4.0	3.8	5098	chr2R	11019876	intron	luna -	chr2R	11022425	intron	luna -	chr2R	11024974	intron	luna -	chr2R_19_11020001	chr2R_11020001	CK1_1-HE
956	chr2R	11207812	11207850	chr2R	11208006	11208044	BS	41	194	16.5	7.5	12.0	3.2	232	chr2R	11207812	intron	shn +	chr2R	11207928	intron	shn +	chr2R	11208044	intron	shn +	chr2R_41_11205001	chr2R_11205001	CK1_1-HE
961	chr2R	11415515	11415551	chr2R	11418665	11418701	opus	7	3150	3.5	4.0	3.8	1.5	3186	chr2R	11415515	intron	Drip -	chr2R	11417108	intron	Drip -	chr2R	11418701	intron	Drip -	chr2R_7_11415001	chr2R_11415001	CK1_1-HE
965	chr2R	11472650	11472679	chr2R	11473848	11473877	pogo	8	1198	5.5	3.5	4.5	1.5	1227	chr2R	11472650	intergenic	not near genes	chr2R	11473264	intergenic	not near genes	chr2R	11473877	intergenic	not near genes	chr2R_8_11470001	chr2R_11470001	CK1_1-HE
989	chr2R	12481138	12481169	chr2R	12482943	12482973	roo	11	1805	3.0	4.0	3.5	2.4	1835	chr2R	12481138	exon	Dh44-R2 +	chr2R	12482056	intron	Dh44-R2 +	chr2R	12482973	intron	Dh44-R2 +	chr2R_11_12480001	chr2R_12480001	CK1_1-HE
990	chr2R	12501696	12501727	chr2R	12503859	12503890	Rt1c	12	2163	4.5	3.5	4.0	2.4	2194	chr2R	12501696	intron	fdl -	chr2R	12502793	intron	fdl -	chr2R	12503890	intron	fdl -	chr2R_12_12500001	chr2R_12500001	CK1_1-HE
993	chr2R	12707520	12707549	chr2R	12715887	12715916	roo	15	8367	5.0	5.0	5.0	2.5	8396	chr2R	12707520	intron	CG42663 +	chr2R	12711718	intron	CG42663 +	chr2R	12715916	intron	CG42663 +	chr2R_15_12710001	chr2R_12710001	CK1_1-HE
998	chr2R	12789291	12789328	chr2R	12797655	12797692	roo	16	8364	2.0	3.5	2.8	4.2	8401	chr2R	12789291	intron,3` UTR	sca +,CR45137 -	chr2R	12793492	intron,intron	sca +,CR45137 -	chr2R	12797692	intron,3` UTR	sca +,CR45137 -	chr2R_16_12790001	chr2R_12790001	CK1_1-HE
999	chr2R	12819443	12819474	chr2R	12824517	12824548	jockey	11	5074	4.0	7.0	5.5	1.7	5105	chr2R	12819443	intergenic	not near genes	chr2R	12821996	intergenic	not near genes	chr2R	12824548	intergenic	not near genes	chr2R_11_12820001	chr2R_12820001	CK1_1-HE
1022	chr2R	13905603	13905633	chr2R	13907586	13907616	Rt1a	18	1983	9.0	3.0	6.0	2.6	2013	chr2R	13905603	intron	shot -	chr2R	13906610	intron	shot -	chr2R	13907616	intron	shot -	chr2R_18_13905001	chr2R_13905001	CK1_1-HE
1029	chr2R	14467295	14467319	chr2R	14476448	14476472	roo	9	9153	4.5	4.0	4.2	1.7	9177	chr2R	14467295	intergenic	not near genes	chr2R	14471884	intergenic	not near genes	chr2R	14476472	5` UTR	CR44462 +	chr2R_9_14470001	chr2R_14470001	CK1_1-HE
1030	chr2R	14497387	14497422	chr2R	14498554	14498589	1360	16	1167	0.0	4.0	2.0	5.3	1202	chr2R	14497387	3` UTR	Cpsf160 -	chr2R	14497988	intron	Cpsf160 -	chr2R	14498589	3` UTR	Cpsf160 -	chr2R_16_14495001	chr2R_14495001	CK1_1-HE
1036	chr2R	14889206	14889236	chr2R	14897815	14897845	Max-element	12	8609	3.5	0.0	1.8	4.3	8639	chr2R	14889206	intergenic	Cyp6a8 -	chr2R	14893526	intergenic	not near genes	chr2R	14897845	intergenic	not near genes	chr2R_12_14890001	chr2R_14890001	CK1_1-HE
1044	chr2R	15004725	15004763	chr2R	15005055	15005093	jockey	22	330	5.5	0.0	2.8	5.8	368	chr2R	15004725	intergenic	not near genes	chr2R	15004909	intergenic	not near genes	chr2R	15005093	intergenic	not near genes	chr2R_22_15000001	chr2R_15000001	CK1_1-HE
1045	chr2R	15015453	15015471	chr2R	15022878	15022896	mdg1	5	7425	11.5	3.0	7.2	0.6	7443	chr2R	15015453	intron	hbs +	chr2R	15019174	intron	hbs +	chr2R	15022896	intron	hbs +	chr2R_5_15015001	chr2R_15015001	CK1_1-HE
1048	chr2R	15084976	15084999	chr2R	15092026	15092049	297	16	7050	5.0	5.5	5.2	2.6	7073	chr2R	15084976	intergenic	not near genes	chr2R	15088512	intergenic	not near genes	chr2R	15092049	5` UTR	CR44457 +	chr2R_16_15085001	chr2R_15085001	CK1_1-HE
1050	chr2R	15119315	15119351	chr2R	15127797	15127833	Tirant	38	8482	9.5	14.5	12.0	2.9	8518	chr2R	15119315	intron	chn +	chr2R	15123574	intron	chn +	chr2R	15127833	intron	chn +	chr2R_38_15120001	chr2R_15120001	CK1_1-HE
1099	chr2R	17236505	17236537	chr2R	17241710	17241742	copia	21	5205	10.0	7.0	8.5	2.2	5237	chr2R	17236505	intron	mbl +	chr2R	17239124	intron	mbl +	chr2R	17241742	intron	mbl +	chr2R_21_17235001	chr2R_17235001	CK1_1-HE
1100	chr2R	17277240	17277244	chr2R	17277639	17277653	jockey	8	408	12.0	12.0	12.0	0.6	413	chr2R	17277240	intron	mbl +	chr2R	17277446	intron	mbl +	chr2R	17277653	intron	mbl +	chr2R_8_17275001	chr2R_17275001	CK1_1-HE
1114	chr2R	17782363	17782391	chr2R	17783567	17783595	pogo	10	1204	3.5	1.0	2.2	3.1	1232	chr2R	17782363	intergenic	CG33981 -,fab1 -	chr2R	17782979	intergenic	not near genes	chr2R	17783595	intergenic	mir-31a -	chr2R_10_17780001	chr2R_17780001	CK1_1-HE
1115	chr2R	17784032	17784049	chr2R	17784272	17784291	pogo	4	241	7.0	8.0	7.5	0.5	259	chr2R	17784032	intergenic	mir-31a -	chr2R	17784162	intergenic	mir-31a -	chr2R	17784291	intergenic	mir-31a -	chr2R_4_17780001	chr2R_17780001	CK1_1-HE
1124	chr2R	18045665	18045690	chr2R	18046018	18046043	jockey	6	353	3.0	3.5	3.2	1.4	378	chr2R	18045665	intergenic	not near genes	chr2R	18045854	intergenic	not near genes	chr2R	18046043	intergenic	CG5767 -	chr2R_6_18045001	chr2R_18045001	CK1_1-HE
1128	chr2R	18111690	18111715	chr2R	18115559	18115584	F-element	11	3869	3.0	9.5	6.2	1.5	3894	chr2R	18111690	intergenic	not near genes	chr2R	18113637	intergenic	not near genes	chr2R	18115584	intergenic	not near genes	chr2R_11_18110001	chr2R_18110001	CK1_1-HE
1133	chr2R	18358395	18358424	chr2R	18372608	18372637	roo	25	14213	5.5	13.0	9.2	2.5	14242	chr2R	18358395	intergenic	not near genes	chr2R	18365516	intergenic	not near genes	chr2R	18372637	intergenic	not near genes	chr2R_25_18365001	chr2R_18365001	CK1_1-HE
1136	chr2R	18575808	18575831	chr2R	18581991	18582020	3S18	10	6186	4.5	3.0	3.8	2.1	6212	chr2R	18575808	intron	GEFmeso -	chr2R	18578914	intron	GEFmeso -	chr2R	18582020	intron	GEFmeso -	chr2R_10_18575001	chr2R_18575001	CK1_1-HE
1137	chr2R	18590872	18590886	chr2R	18600025	18600039	roo	8	9153	2.5	3.0	2.8	2.1	9167	chr2R	18590872	intron	GEFmeso -	chr2R	18595456	intron	GEFmeso -	chr2R	18600039	intron	GEFmeso -	chr2R_8_18595001	chr2R_18595001	CK1_1-HE
1178	chr2R	19715852	19715857	chr2R	19723322	19723327	blood	6	7470	3.0	2.5	2.8	1.6	7475	chr2R	19715852	intergenic	not near genes	chr2R	19719590	intergenic	not near genes	chr2R	19723327	intergenic	not near genes	chr2R_6_19715001	chr2R_19715001	CK1_1-HE
1179	chr2R	19776592	19776627	chr2R	19779916	19779951	jockey	8	3324	1.0	2.5	1.8	2.9	3359	chr2R	19776592	intergenic	not near genes	chr2R	19778272	intergenic	not near genes	chr2R	19779951	intergenic	not near genes	chr2R_8_19775001	chr2R_19775001	CK1_1-HE
1182	chr2R	19914845	19914862	chr2R	19922258	19922275	mdg1	8	7413	8.5	2.5	5.5	1.2	7430	chr2R	19914845	intergenic	not near genes	chr2R	19918560	intergenic	not near genes	chr2R	19922275	intergenic	not near genes	chr2R_8_19915001	chr2R_19915001	CK1_1-HE
1185	chr2R	19957427	19957462	chr2R	19962630	19962659	copia	15	5203	5.5	4.5	5.0	2.5	5232	chr2R	19957427	intergenic	CG44623 +	chr2R	19960043	intergenic	not near genes	chr2R	19962659	intergenic	not near genes	chr2R_15_19960001	chr2R_19960001	CK1_1-HE
1213	chr2R	20739441	20739478	chr2R	20744210	20744247	F-element	28	4769	5.5	8.5	7.0	3.5	4806	chr2R	20739441	intron	dpr +	chr2R	20741844	intron	dpr +	chr2R	20744247	intron	dpr +	chr2R_28_20740001	chr2R_20740001	CK1_1-HE
1236	chr2R	21753081	21753093	chr2R	21753567	21753579	roo	10	486	14.5	4.5	9.5	1.0	498	chr2R	21753081	intergenic	not near genes	chr2R	21753330	intergenic	not near genes	chr2R	21753579	intergenic	not near genes	chr2R_10_21750001	chr2R_21750001	CK1_1-HE
1249	chr2R	22349692	22349725	chr2R	22351477	22351510	jockey	25	1785	4.5	10.0	7.2	3.0	1818	chr2R	22349692	intron	Liprin-gamma -	chr2R	22350601	intron	Liprin-gamma -	chr2R	22351510	intron	Liprin-gamma -	chr2R_25_22350001	chr2R_22350001	CK1_1-HE
1250	chr2R	22360379	22360397	chr2R	22360813	22360831	jockey	10	434	9.0	2.0	5.5	1.5	452	chr2R	22360379	intron	Liprin-gamma -	chr2R	22360605	intron	Liprin-gamma -	chr2R	22360831	intron	Liprin-gamma -	chr2R_10_22360001	chr2R_22360001	CK1_1-HE
1252	chr2R	22465318	22465348	chr2R	22465512	22465548	BS	7	197	0.0	4.0	2.0	2.3	230	chr2R	22465318	intron	CG10384 +	chr2R	22465433	intron	CG10384 +	chr2R	22465548	intron	CG10384 +	chr2R_7_22465001	chr2R_22465001	CK1_1-HE
1256	chr2R	22525745	22525781	chr2R	22529301	22529337	jockey	21	3556	6.5	7.0	6.8	2.7	3592	chr2R	22525745	intron	px -	chr2R	22527541	intron	px -	chr2R	22529337	intron	px -	chr2R_21_22525001	chr2R_22525001	CK1_1-HE
1261	chr2R	22729458	22729465	chr2R	22729667	22729674	INE-1	4	209	1.5	1.0	1.2	1.8	216	chr2R	22729458	intron	jbug -	chr2R	22729566	intron	jbug -	chr2R	22729674	intron	jbug -	chr2R_4_22725001	chr2R_22725001	CK1_1-HE
1263	chr2R	22774959	22775001	chr2R	22775379	22775421	jockey	29	420	5.5	6.5	6.0	4.1	462	chr2R	22774959	intron	CG42260 -	chr2R	22775190	intron	CG42260 -	chr2R	22775421	intron	CG42260 -	chr2R_29_22775001	chr2R_22775001	CK1_1-HE
1265	chr2R	22843022	22843039	chr2R	22844985	22845002	flea	5	1963	4.0	3.0	3.5	1.1	1980	chr2R	22843022	intergenic	CG9826 +	chr2R	22844012	intergenic	not near genes	chr2R	22845002	intergenic	not near genes	chr2R_5_22840001	chr2R_22840001	CK1_1-HE
1298	chr2R	24147071	24147090	chr2R	24154650	24154669	412	7	7579	3.0	3.5	3.2	1.7	7598	chr2R	24147071	intron	Dat +	chr2R	24150870	intron	Dat +	chr2R	24154669	intron	Dat +	chr2R_7_24150001	chr2R_24150001	CK1_1-HE
1300	chr2R	24177244	24177265	chr2R	24184730	24184751	412	4	7486	3.0	0.5	1.8	1.4	7507	chr2R	24177244	3` UTR	Nop60B +	chr2R	24180998	intron	Nop60B +	chr2R	24184751	3` UTR	Nop60B +	chr2R_4_24180001	chr2R_24180001	CK1_1-HE
1312	chr2R	24727883	24727916	chr2R	24735392	24735425	mdg1	12	7508	3.5	6.0	4.8	2.1	7542	chr2R	24727883	intron	Mid1 -	chr2R	24731654	intron	Mid1 -	chr2R	24735425	intron	Mid1 -	chr2R_12_24730001	chr2R_24730001	CK1_1-HE
1323	chr2R	25141651	25141684	chr2R	25159342	25159375	roo	15	17691	4.0	6.0	5.0	2.5	17724	chr2R	25141651	intergenic	not near genes	chr2R	25150513	intergenic	not near genes	chr2R	25159375	intergenic	not near genes	chr2R_15_25150001	chr2R_25150001	CK1_1-HE
1328	chr3L	110208	110238	chr3L	119376	119406	roo	8	9168	6.0	5.0	5.5	1.2	9198	chr3L	110208	intergenic	not near genes	chr3L	114807	intergenic	not near genes	chr3L	119406	intergenic	not near genes	chr3L_8_110001	chr3L_110001	CK1_1-HE
1330	chr3L	402686	402718	chr3L	409740	409772	297	26	7054	7.5	14.5	11.0	2.2	7086	chr3L	402686	intergenic	not near genes	chr3L	406229	intergenic	not near genes	chr3L	409772	intergenic	not near genes	chr3L_26_405001	chr3L_405001	CK1_1-HE
1338	chr3L	789911	789944	chr3L	790397	790430	roo	21	486	4.0	11.0	7.5	2.5	519	chr3L	789911	intergenic	not near genes	chr3L	790170	intergenic	not near genes	chr3L	790430	intergenic	not near genes	chr3L_21_790001	chr3L_790001	CK1_1-HE
1339	chr3L	857996	858026	chr3L	866478	866508	Tirant	8	8482	4.0	1.5	2.8	2.1	8512	chr3L	857996	intergenic	not near genes	chr3L	862252	intergenic	not near genes	chr3L	866508	5` UTR	CG12502 +	chr3L_8_860001	chr3L_860001	CK1_1-HE
1341	chr3L	925186	925210	chr3L	932613	932637	mdg1	9	7427	0.0	8.0	4.0	1.8	7451	chr3L	925186	intron	Glut1 +	chr3L	928912	intron	Glut1 +	chr3L	932637	intron	Glut1 +	chr3L_9_925001	chr3L_925001	CK1_1-HE
1342	chr3L	939774	939801	chr3L	940896	940923	jockey	17	1122	6.0	8.0	7.0	2.1	1149	chr3L	939774	intron	Glut1 +	chr3L	940348	intron	Glut1 +	chr3L	940923	intron	Glut1 +	chr3L_17_940001	chr3L_940001	CK1_1-HE
1348	chr3L	1047351	1047378	chr3L	1055164	1055191	412	7	7811	4.0	4.0	4.0	1.4	7840	chr3L	1047351	intron	bab1 -	chr3L	1051271	intron	bab1 -	chr3L	1055191	intron	bab1 -	chr3L_7_1050001	chr3L_1050001	CK1_1-HE
1352	chr3L	1154142	1154160	chr3L	1163293	1163311	roo	8	9151	0.0	6.0	3.0	2.0	9169	chr3L	1154142	intron	bab2 -	chr3L	1158726	intron	bab2 -	chr3L	1163311	intron	bab2 -	chr3L_8_1155001	chr3L_1155001	CK1_1-HE
1353	chr3L	1219604	1219624	chr3L	1227338	1227358	412	5	7734	1.0	0.5	0.8	2.8	7754	chr3L	1219604	intron	mwh +	chr3L	1223481	intron	mwh +	chr3L	1227358	intron	mwh +	chr3L_5_1220001	chr3L_1220001	CK1_1-HE
1358	chr3L	1505994	1506032	chr3L	1513592	1513630	17.6	16	7598	2.5	4.0	3.2	3.8	7636	chr3L	1505994	intron,intron	Psa +,cue -	chr3L	1509812	intron,intron	Psa +,cue -	chr3L	1513630	intron,intron	Psa +,cue -	chr3L_16_1505001	chr3L_1505001	CK1_1-HE
1376	chr3L	2447502	2447532	chr3L	2456659	2456689	roo	5	9157	1.0	2.0	1.5	2.0	9187	chr3L	2447502	intron	CG45186 +	chr3L	2452096	intron	CG45186 +	chr3L	2456689	intron	CG45186 +	chr3L_5_2450001	chr3L_2450001	CK1_1-HE
1388	chr3L	2751453	2751461	chr3L	2755749	2755757	F-element	9	4296	10.5	16.0	13.2	0.6	4304	chr3L	2751453	intron	Mrtf -	chr3L	2753605	intron	Mrtf -	chr3L	2755757	intron	Mrtf -	chr3L_9_2750001	chr3L_2750001	CK1_1-HE
1394	chr3L	2927836	2927870	chr3L	2936114	2936148	Tirant	30	8278	6.0	6.0	6.0	4.3	8312	chr3L	2927836	intron	Shab +	chr3L	2931992	intron	Shab +	chr3L	2936148	intron	Shab +	chr3L_30_2930001	chr3L_2930001	CK1_1-HE
1398	chr3L	3061282	3061317	chr3L	3069866	3069901	Tirant	45	8583	12.0	13.5	12.8	3.3	8619	chr3L	3061282	intron	CG32486 -	chr3L	3065592	intron	CG32486 -	chr3L	3069901	intron	CG32486 -	chr3L_45_3065001	chr3L_3065001	CK1_1-HE
1406	chr3L	3281436	3281473	chr3L	3281933	3281970	Doc	19	496	5.5	4.0	4.8	3.3	534	chr3L	3281436	intron	CG12017 +	chr3L	3281703	intron	CG12017 +	chr3L	3281970	intron	CG12017 +	chr3L_19_3280001	chr3L_3280001	CK1_1-HE
1410	chr3L	3475074	3475113	chr3L	3475519	3475558	jockey	11	444	2.5	3.0	2.8	2.9	484	chr3L	3475074	intron	CG42324 +	chr3L	3475316	intron	CG42324 +	chr3L	3475558	intron	CG42324 +	chr3L_11_3475001	chr3L_3475001	CK1_1-HE
1415	chr3L	3601295	3601331	chr3L	3606607	3606643	copia	26	5312	4.0	11.0	7.5	3.1	5348	chr3L	3601295	intron	Eip63E +	chr3L	3603969	intron	Eip63E +	chr3L	3606643	intron	Eip63E +	chr3L_26_3600001	chr3L_3600001	CK1_1-HE
1422	chr3L	3833736	3833769	chr3L	3833978	3834011	pogo	18	242	9.5	4.5	7.0	2.2	275	chr3L	3833736	intron	enc +	chr3L	3833874	intron	enc +	chr3L	3834011	intron	enc +	chr3L_18_3830001	chr3L_3830001	CK1_1-HE
1429	chr3L	4328736	4328764	chr3L	4336235	4336263	412	15	7498	2.5	8.0	5.2	2.4	7527	chr3L	4328736	intron	Cip4 -	chr3L	4332500	intron	Cip4 -	chr3L	4336263	intron	Cip4 -	chr3L_15_4330001	chr3L_4330001	CK1_1-HE
1446	chr3L	4901142	4901150	chr3L	4907333	4907341	diver	5	6191	2.0	3.5	2.8	1.3	6199	chr3L	4901142	intergenic	CG13704 +	chr3L	4904242	intergenic	not near genes	chr3L	4907341	intergenic	not near genes	chr3L_5_4900001	chr3L_4900001	CK1_1-HE
1452	chr3L	5034155	5034164	chr3L	5043308	5043317	roo	6	9153	8.0	0.5	4.2	1.2	9162	chr3L	5034155	intron	Con -	chr3L	5038736	intron	Con -	chr3L	5043317	intron	Con -	chr3L_6_5035001	chr3L_5035001	CK1_1-HE
1454	chr3L	5045454	5045484	chr3L	5050236	5050266	Doc	27	4782	8.5	5.5	7.0	3.4	4812	chr3L	5045454	intron	Con -	chr3L	5047860	intron	Con -	chr3L	5050266	intron	Con -	chr3L_27_5045001	chr3L_5045001	CK1_1-HE
1466	chr3L	5299149	5299184	chr3L	5306586	5306621	Quasimodo	13	7437	4.5	1.0	2.8	3.4	7472	chr3L	5299149	intergenic	not near genes	chr3L	5302885	intergenic	not near genes	chr3L	5306621	intergenic	not near genes	chr3L_13_5300001	chr3L_5300001	CK1_1-HE
1480	chr3L	5537723	5537744	chr3L	5538066	5538087	jockey	8	343	3.0	2.0	2.5	2.3	364	chr3L	5537723	intergenic	not near genes	chr3L	5537905	intergenic	not near genes	chr3L	5538087	intergenic	CG10625 -	chr3L_8_5535001	chr3L_5535001	CK1_1-HE
1492	chr3L	5926315	5926349	chr3L	5926506	5926540	BS	9	191	1.0	1.5	1.2	4.1	225	chr3L	5926315	intron	Vap-33B +	chr3L	5926428	intron	Vap-33B +	chr3L	5926540	intron	Vap-33B +	chr3L_9_5925001	chr3L_5925001	CK1_1-HE
1495	chr3L	6001678	6001717	chr3L	6004379	6004418	jockey	30	2701	5.0	8.5	6.8	3.8	2740	chr3L	6001678	intron	PVRAP +	chr3L	6003048	intron	PVRAP +	chr3L	6004418	intron	PVRAP +	chr3L_30_6000001	chr3L_6000001	CK1_1-HE
1497	chr3L	6040369	6040384	chr3L	6042726	6042741	Doc	9	2357	0.0	1.5	0.8	5.0	2372	chr3L	6040369	intergenic	Jon65Aiv +	chr3L	6041555	intergenic	not near genes	chr3L	6042741	intergenic	not near genes	chr3L_9_6040001	chr3L_6040001	CK1_1-HE
1504	chr3L	6220916	6220946	chr3L	6230069	6230099	roo	8	9153	0.0	3.0	1.5	3.2	9183	chr3L	6220916	5` UTR	pncr008:3L +	chr3L	6225508	intergenic	not near genes	chr3L	6230099	intergenic	not near genes	chr3L_8_6225001	chr3L_6225001	CK1_1-HE
1510	chr3L	6335007	6335043	chr3L	6335479	6335515	297	22	472	6.0	8.0	7.0	2.8	508	chr3L	6335007	intron	CG13300 -	chr3L	6335261	intron	CG13300 -	chr3L	6335515	intron	CG13300 -	chr3L_22_6335001	chr3L_6335001	CK1_1-HE
1513	chr3L	6405656	6405690	chr3L	6432121	6432155	roo	21	26465	4.5	5.5	5.0	3.5	26499	chr3L	6405656	intron	CG42747 +	chr3L	6418906	intron	CG42747 +	chr3L	6432155	intron	CG42747 +	chr3L_21_6415001	chr3L_6415001	CK1_1-HE
1518	chr3L	6781123	6781139	chr3L	6783137	6783153	Doc	7	2014	8.5	0.0	4.2	1.3	2030	chr3L	6781123	intergenic	not near genes	chr3L	6782138	intergenic	not near genes	chr3L	6783153	intergenic	not near genes	chr3L_7_6780001	chr3L_6780001	CK1_1-HE
1521	chr3L	6855940	6855950	chr3L	6860719	6860735	Doc	7	4784	7.5	16.0	11.8	0.5	4795	chr3L	6855940	intergenic	not near genes	chr3L	6858338	intergenic	not near genes	chr3L	6860735	intergenic	not near genes	chr3L_7_6855001	chr3L_6855001	CK1_1-HE
1524	chr3L	6887517	6887550	chr3L	6895010	6895043	roo	14	7493	2.5	1.5	2.0	4.7	7526	chr3L	6887517	intergenic	not near genes	chr3L	6891280	intergenic	not near genes	chr3L	6895043	intergenic	not near genes	chr3L_14_6890001	chr3L_6890001	CK1_1-HE
1527	chr3L	6994886	6994893	chr3L	6995499	6995506	BS	6	613	0.0	7.5	3.8	1.2	620	chr3L	6994886	intergenic	bin +	chr3L	6995196	intergenic	not near genes	chr3L	6995506	intergenic	not near genes	chr3L_6_6995001	chr3L_6995001	CK1_1-HE
1541	chr3L	7498763	7498788	chr3L	7503541	7503566	F-element	10	4778	4.5	4.5	4.5	1.8	4803	chr3L	7498763	5` UTR	CG8539 -	chr3L	7501164	intergenic	not near genes	chr3L	7503566	intergenic	not near genes	chr3L_10_7500001	chr3L_7500001	CK1_1-HE
1552	chr3L	7793711	7793744	chr3L	7800764	7800797	297	27	7053	8.0	11.5	9.8	2.5	7086	chr3L	7793711	intron	CG32369 -	chr3L	7797254	intron	CG32369 -	chr3L	7800797	intron	CG32369 -	chr3L_27_7795001	chr3L_7795001	CK1_1-HE
1557	chr3L	7886510	7886547	chr3L	7889029	7889066	Stalker4	38	2519	7.5	5.0	6.2	5.3	2556	chr3L	7886510	intron	CG32365 +	chr3L	7887788	intron	CG32365 +	chr3L	7889066	intron	CG32365 +	chr3L_38_7885001	chr3L_7885001	CK1_1-HE
1558	chr3L	7916829	7916860	chr3L	7926001	7926032	roo	6	9172	1.0	3.0	2.0	2.0	9203	chr3L	7916829	3` UTR	syd -	chr3L	7921430	intron	syd -	chr3L	7926032	3` UTR	syd -	chr3L_6_7920001	chr3L_7920001	CK1_1-HE
1559	chr3L	7985376	7985398	chr3L	7987706	7987728	NOF	10	2330	4.5	5.5	5.0	1.7	2352	chr3L	7985376	intron	nmo +	chr3L	7986552	intron	nmo +	chr3L	7987728	intron	nmo +	chr3L_10_7985001	chr3L_7985001	CK1_1-HE
1575	chr3L	8498295	8498316	chr3L	8505763	8505784	blood	6	7468	0.5	1.5	1.0	3.0	7489	chr3L	8498295	intron	CG43163 -	chr3L	8502040	intron	CG43163 -	chr3L	8505784	intron	CG43163 -	chr3L_6_8500001	chr3L_8500001	CK1_1-HE
1580	chr3L	8791275	8791289	chr3L	8796696	8796710	I-element	7	5421	5.0	0.0	2.5	2.0	5435	chr3L	8791275	exon	Fhos +	chr3L	8793992	intron	Fhos +	chr3L	8796710	intron	Fhos +	chr3L_7_8790001	chr3L_8790001	CK1_1-HE
1590	chr3L	9076925	9076958	chr3L	9084486	9084519	412	16	7561	5.0	8.5	6.8	2.1	7594	chr3L	9076925	exon	Tequila +	chr3L	9080722	intron	Tequila +	chr3L	9084519	exon	Tequila +	chr3L_16_9080001	chr3L_9080001	CK1_1-HE
1591	chr3L	9130555	9130582	chr3L	9134317	9134344	412	24	3762	8.0	13.0	10.5	2.1	3789	chr3L	9130555	intergenic	bol -	chr3L	9132450	intergenic	not near genes	chr3L	9134344	intergenic	Dhpr +	chr3L_24_9130001	chr3L_9130001	CK1_1-HE
1592	chr3L	9164694	9164730	chr3L	9166162	9166198	hobo	36	1468	11.5	10.0	10.8	3.1	1504	chr3L	9164694	intron	Rdl -	chr3L	9165446	intron	Rdl -	chr3L	9166198	intron	Rdl -	chr3L_36_9165001	chr3L_9165001	CK1_1-HE
1593	chr3L	9219239	9219275	chr3L	9219912	9219948	jockey	29	673	4.5	5.5	5.0	4.8	709	chr3L	9219239	intergenic	not near genes	chr3L	9219594	intergenic	not near genes	chr3L	9219948	intergenic	not near genes	chr3L_29_9215001	chr3L_9215001	CK1_1-HE
1594	chr3L	9270614	9270651	chr3L	9278370	9278401	roo	16	7755	3.0	5.0	4.0	3.2	7787	chr3L	9270614	intron	GluRIB +	chr3L	9274508	intron	GluRIB +	chr3L	9278401	exon	GluRIB +	chr3L_16_9270001	chr3L_9270001	CK1_1-HE
1598	chr3L	9443506	9443541	chr3L	9445298	9445333	S-element	8	1792	2.5	3.5	3.0	2.0	1827	chr3L	9443506	intron	CG33926 +	chr3L	9444420	intron	CG33926 +	chr3L	9445333	intron	CG33926 +	chr3L_8_9440001	chr3L_9440001	CK1_1-HE
1599	chr3L	9501700	9501734	chr3L	9502187	9502221	roo	7	487	2.0	3.0	2.5	2.0	521	chr3L	9501700	intron	path -	chr3L	9501960	intron	path -	chr3L	9502221	intron	path -	chr3L_7_9500001	chr3L_9500001	CK1_1-HE
1600	chr3L	9533752	9533786	chr3L	9541313	9541347	412	21	7561	6.0	5.0	5.5	3.2	7595	chr3L	9533752	intergenic	not near genes	chr3L	9537550	intergenic	not near genes	chr3L	9541347	intergenic	not near genes	chr3L_21_9535001	chr3L_9535001	CK1_1-HE
1601	chr3L	9571900	9571925	chr3L	9572249	9572274	jockey	13	349	12.0	0.5	6.2	1.8	374	chr3L	9571900	intron	CG42673 +	chr3L	9572087	intron	CG42673 +	chr3L	9572274	intron	CG42673 +	chr3L_13_9570001	chr3L_9570001	CK1_1-HE
1602	chr3L	9575903	9575935	chr3L	9580984	9581016	jockey	21	5081	11.0	6.0	8.5	2.2	5113	chr3L	9575903	intron	CG42673 +	chr3L	9578460	intron	CG42673 +	chr3L	9581016	intron	CG42673 +	chr3L_21_9575001	chr3L_9575001	CK1_1-HE
1614	chr3L	9929665	9929684	chr3L	9938445	9938466	roo	15	8781	8.0	4.0	6.0	2.1	8801	chr3L	9929665	intron	CG34356 +	chr3L	9934066	intron	CG34356 +	chr3L	9938466	intron	CG34356 +	chr3L_15_9930001	chr3L_9930001	CK1_1-HE
1615	chr3L	9929694	9929701	chr3L	9938475	9938482	roo	6	8781	4.5	9.5	7.0	0.8	8788	chr3L	9929694	intron	CG34356 +	chr3L	9934088	intron	CG34356 +	chr3L	9938482	intron	CG34356 +	chr3L_6_9930001	chr3L_9930001	CK1_1-HE
1632	chr3L	10414943	10414979	chr3L	10417316	10417352	Doc	11	2373	1.0	5.5	3.2	2.6	2409	chr3L	10414943	intergenic	CG12362 +	chr3L	10416148	intergenic	not near genes	chr3L	10417352	intergenic	not near genes	chr3L_11_10415001	chr3L_10415001	CK1_1-HE
1660	chr3L	11087062	11087089	chr3L	11088852	11088879	S-element	15	1790	2.5	1.5	2.0	5.0	1817	chr3L	11087062	intron	JIL-1 -	chr3L	11087970	intron	JIL-1 -	chr3L	11088879	intron	JIL-1 -	chr3L_15_11085001	chr3L_11085001	CK1_1-HE
1661	chr3L	11105290	11105329	chr3L	11107002	11107041	X-element	6	1712	1.0	3.0	2.0	2.0	1751	chr3L	11105290	intergenic	not near genes	chr3L	11106166	intergenic	not near genes	chr3L	11107041	exon	CG32073 -	chr3L_6_11105001	chr3L_11105001	CK1_1-HE
1667	chr3L	11264464	11264497	chr3L	11271417	11271450	17.6	15	6953	7.0	6.0	6.5	2.0	6986	chr3L	11264464	intergenic	not near genes	chr3L	11267957	intergenic	not near genes	chr3L	11271450	intergenic	not near genes	chr3L_15_11265001	chr3L_11265001	CK1_1-HE
1668	chr3L	11277460	11277483	chr3L	11278456	11278479	Rt1a	9	996	16.5	8.0	12.2	0.7	1019	chr3L	11277460	intergenic	not near genes	chr3L	11277970	intergenic	not near genes	chr3L	11278479	intergenic	not near genes	chr3L_9_11275001	chr3L_11275001	CK1_1-HE
1672	chr3L	11329688	11329724	chr3L	11332894	11332930	jockey	19	3206	9.5	4.5	7.0	2.4	3242	chr3L	11329688	intergenic	not near genes	chr3L	11331309	intergenic	not near genes	chr3L	11332930	intergenic	not near genes	chr3L_19_11330001	chr3L_11330001	CK1_1-HE
1683	chr3L	11564789	11564811	chr3L	11572415	11572437	412	7	7626	3.5	6.5	5.0	1.2	7648	chr3L	11564789	exon	CG33267 +	chr3L	11568613	intron	CG33267 +	chr3L	11572437	exon	CG33267 +	chr3L_7_11565001	chr3L_11565001	CK1_1-HE
1689	chr3L	11723085	11723115	chr3L	11727881	11727911	Doc	9	4796	1.5	5.5	3.5	2.0	4826	chr3L	11723085	3` UTR	Bmcp +	chr3L	11725498	intron	Bmcp +	chr3L	11727911	3` UTR	Bmcp +	chr3L_9_11725001	chr3L_11725001	CK1_1-HE
1698	chr3L	11864554	11864585	chr3L	11865850	11865881	pogo	20	1296	3.0	9.5	6.2	2.8	1327	chr3L	11864554	intron	CG44837 -	chr3L	11865218	intron	CG44837 -	chr3L	11865881	intron	CG44837 -	chr3L_20_11865001	chr3L_11865001	CK1_1-HE
1721	chr3L	12874923	12874957	chr3L	12877216	12877250	jockey	20	2293	6.0	8.5	7.2	2.4	2327	chr3L	12874923	intergenic	not near genes	chr3L	12876086	intergenic	not near genes	chr3L	12877250	intergenic	not near genes	chr3L_20_12875001	chr3L_12875001	CK1_1-HE
1728	chr3L	12919273	12919304	chr3L	12924747	12924778	Rt1c	22	5474	7.0	5.0	6.0	3.1	5505	chr3L	12919273	intergenic	not near genes	chr3L	12922026	intergenic	not near genes	chr3L	12924778	intergenic	not near genes	chr3L_22_12920001	chr3L_12920001	CK1_1-HE
1730	chr3L	12957784	12957819	chr3L	12962267	12962302	copia	17	4482	4.5	6.5	5.5	2.6	4518	chr3L	12957784	intergenic	not near genes	chr3L	12960043	intergenic	not near genes	chr3L	12962302	intergenic	not near genes	chr3L_17_12960001	chr3L_12960001	CK1_1-HE
1751	chr3L	13525153	13525186	chr3L	13532950	13532983	roo	30	7797	10.0	11.0	10.5	2.6	7830	chr3L	13525153	intergenic	not near genes	chr3L	13529068	intergenic	not near genes	chr3L	13532983	intergenic	not near genes	chr3L_30_13525001	chr3L_13525001	CK1_1-HE
1763	chr3L	13804542	13804576	chr3L	13822829	13822863	roo	35	18287	7.0	20.5	13.8	2.4	18321	chr3L	13804542	intergenic	not near genes	chr3L	13813702	intergenic	not near genes	chr3L	13822863	intergenic	not near genes	chr3L_35_13810001	chr3L_13810001	CK1_1-HE
1776	chr3L	14245567	14245594	chr3L	14245662	14245689	1360	13	95	11.0	8.5	9.8	1.2	122	chr3L	14245567	3` UTR	CR44561 -	chr3L	14245628	3` UTR	CR44561 -	chr3L	14245689	3` UTR	CR44561 -	chr3L_13_14245001	chr3L_14245001	CK1_1-HE
1777	chr3L	14267369	14267398	chr3L	14271810	14271839	F-element	9	4441	5.0	2.5	3.8	1.9	4470	chr3L	14267369	intergenic	not near genes	chr3L	14269604	intergenic	not near genes	chr3L	14271839	intergenic	not near genes	chr3L_9_14265001	chr3L_14265001	CK1_1-HE
1779	chr3L	14295979	14296016	chr3L	14296466	14296503	roo	48	487	9.0	9.5	9.2	4.7	524	chr3L	14295979	intron	fz +	chr3L	14296241	intron	fz +	chr3L	14296503	intron	fz +	chr3L_48_14295001	chr3L_14295001	CK1_1-HE
1780	chr3L	14312019	14312057	chr3L	14316834	14316872	X-element	33	4815	9.0	5.5	7.2	4.0	4853	chr3L	14312019	exon	fz +	chr3L	14314446	intron	fz +	chr3L	14316872	intron	fz +	chr3L_33_14310001	chr3L_14310001	CK1_1-HE
1789	chr3L	14468445	14468478	chr3L	14473652	14473685	copia	44	5207	8.5	14.5	11.5	3.5	5240	chr3L	14468445	intron	bbg -	chr3L	14471065	intron	bbg -	chr3L	14473685	intron	bbg -	chr3L_44_14470001	chr3L_14470001	CK1_1-HE
1797	chr3L	14721184	14721209	chr3L	14723028	14723053	Rt1c	13	1844	5.5	9.0	7.2	1.6	1869	chr3L	14721184	intron	ome +	chr3L	14722118	intron	ome +	chr3L	14723053	intron	ome +	chr3L_13_14720001	chr3L_14720001	CK1_1-HE
1798	chr3L	14725600	14725627	chr3L	14728595	14728622	Doc	12	2995	6.0	9.5	7.8	1.4	3022	chr3L	14725600	intron	ome +	chr3L	14727111	intron	ome +	chr3L	14728622	intron	ome +	chr3L_12_14725001	chr3L_14725001	CK1_1-HE
1806	chr3L	14954366	14954399	chr3L	14956036	14956069	transib2	20	1670	6.5	6.0	6.2	2.8	1703	chr3L	14954366	intergenic	not near genes	chr3L	14955218	intergenic	not near genes	chr3L	14956069	intergenic	not near genes	chr3L_20_14955001	chr3L_14955001	CK1_1-HE
1810	chr3L	15085047	15085075	chr3L	15086214	15086241	1360	8	1167	4.0	1.0	2.5	2.3	1194	chr3L	15085047	intron	cp309 -	chr3L	15085644	intron	cp309 -	chr3L	15086241	intron	cp309 -	chr3L_8_15085001	chr3L_15085001	CK1_1-HE
1819	chr3L	15295768	15295801	chr3L	15298612	15298645	gypsy5	27	2844	8.0	10.5	9.2	2.6	2877	chr3L	15295768	intergenic	not near genes	chr3L	15297206	intergenic	not near genes	chr3L	15298645	intergenic	Best4 +	chr3L_27_15295001	chr3L_15295001	CK1_1-HE
1822	chr3L	15423758	15423783	chr3L	15426603	15426628	opus	21	2845	12.5	6.0	9.2	2.1	2870	chr3L	15423758	intergenic	not near genes	chr3L	15425193	intergenic	not near genes	chr3L	15426628	intergenic	not near genes	chr3L_21_15425001	chr3L_15425001	CK1_1-HE
1823	chr3L	15422934	15422941	chr3L	15427015	15427229	opus	4	4192	44.0	41.5	42.8	0.1	4295	chr3L	15422934	intergenic	not near genes	chr3L	15425082	intergenic	not near genes	chr3L	15427229	intergenic	not near genes	chr3L_4_15425001	chr3L_15425001	CK1_1-HE
1846	chr3L	15899223	15899259	chr3L	15899791	15899827	jockey	13	567	2.5	4.5	3.5	2.9	604	chr3L	15899223	intergenic	pHCl -	chr3L	15899525	intergenic	pHCl -	chr3L	15899827	intergenic	sff -	chr3L_13_15895001	chr3L_15895001	CK1_1-HE
1847	chr3L	15929194	15929229	chr3L	15938341	15938377	roo	10	9148	4.5	2.0	3.2	2.4	9183	chr3L	15929194	intron	Pka-C3 -	chr3L	15933786	intron	Pka-C3 -	chr3L	15938377	intron	Pka-C3 -	chr3L_10_15930001	chr3L_15930001	CK1_1-HE
1852	chr3L	16184084	16184122	chr3L	16188929	16188967	X-element	38	4845	9.0	8.0	8.5	4.0	4883	chr3L	16184084	intergenic	not near genes	chr3L	16186526	intergenic	not near genes	chr3L	16188967	intergenic	not near genes	chr3L_38_16185001	chr3L_16185001	CK1_1-HE
1862	chr3L	16443847	16443879	chr3L	16446188	16446220	Doc	31	2341	6.5	11.0	8.8	3.2	2373	chr3L	16443847	intron,intron	CG33158 +,dsx-c73A -	chr3L	16445034	intron,intron	CG33158 +,dsx-c73A -	chr3L	16446220	intron,intron	CG33158 +,dsx-c73A -	chr3L_31_16445001	chr3L_16445001	CK1_1-HE
1864	chr3L	16493972	16494012	chr3L	16494490	16494530	jockey	26	518	4.0	8.5	6.2	3.6	558	chr3L	16493972	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L	16494251	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L	16494530	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L_26_16490001	chr3L_16490001	CK1_1-HE
1868	chr3L	16616507	16616540	chr3L	16621836	16621869	297	6	5329	2.0	3.0	2.5	1.7	5362	chr3L	16616507	3` UTR	Abl -	chr3L	16619188	3` UTR	Abl -	chr3L	16621869	3` UTR	Abl -	chr3L_6_16615001	chr3L_16615001	CK1_1-HE
1871	chr3L	16684016	16684052	chr3L	16689238	16689274	copia	33	5222	11.5	13.5	12.5	2.4	5258	chr3L	16684016	intron,intron	Lasp -,CG43954 -	chr3L	16686645	intron,intron	Lasp -,CG43954 -	chr3L	16689274	intron,intron,5` UTR	Lasp -,CG43954 -,CR45179 +	chr3L_33_16685001	chr3L_16685001	CK1_1-HE
1879	chr3L	16945725	16945760	chr3L	16954879	16954914	roo	29	9154	11.5	12.5	12.0	2.2	9189	chr3L	16945725	exon	Obp73a +	chr3L	16950320	intergenic	not near genes	chr3L	16954914	5` UTR	Nc73EF +	chr3L_29_16950001	chr3L_16950001	CK1_1-HE
1882	chr3L	17034934	17034962	chr3L	17035123	17035151	G2	4	189	2.0	1.0	1.5	1.6	217	chr3L	17034934	intergenic	not near genes	chr3L	17035042	intergenic	not near genes	chr3L	17035151	intergenic	not near genes	chr3L_4_17035001	chr3L_17035001	CK1_1-HE
1883	chr3L	17085002	17085033	chr3L	17094152	17094183	roo	24	9150	12.5	11.5	12.0	1.8	9181	chr3L	17085002	intron	Rbp6 -	chr3L	17089592	intron	Rbp6 -	chr3L	17094183	intron	Rbp6 -	chr3L_24_17085001	chr3L_17085001	CK1_1-HE
1897	chr3L	17516979	17517012	chr3L	17524538	17524571	412	8	7559	6.0	7.0	6.5	1.1	7592	chr3L	17516979	intron	CG7564 +	chr3L	17520775	intron	CG7564 +	chr3L	17524571	3` UTR	CG7564 +	chr3L_8_17520001	chr3L_17520001	CK1_1-HE
1907	chr3L	17730858	17730880	chr3L	17738189	17738211	mdg1	8	7331	1.5	2.5	2.0	2.7	7353	chr3L	17730858	intron	Ccn +	chr3L	17734534	intron	Ccn +	chr3L	17738211	intron	Ccn +	chr3L_8_17730001	chr3L_17730001	CK1_1-HE
1911	chr3L	17799808	17799836	chr3L	17801596	17801624	S-element	7	1788	1.5	1.0	1.2	3.2	1816	chr3L	17799808	intron	NUCB1 -	chr3L	17800716	intron	NUCB1 -	chr3L	17801624	intron	NUCB1 -	chr3L_7_17800001	chr3L_17800001	CK1_1-HE
1914	chr3L	17918380	17918398	chr3L	17921183	17921202	opus	6	2804	4.5	3.0	3.8	1.2	2822	chr3L	17918380	intergenic	not near genes	chr3L	17919791	intergenic	not near genes	chr3L	17921202	intergenic	not near genes	chr3L_6_17915001	chr3L_17915001	CK1_1-HE
1921	chr3L	18047713	18047734	chr3L	18056771	18056792	roo	8	9058	4.5	5.5	5.0	1.3	9079	chr3L	18047713	intron	Eip75B -	chr3L	18052252	intron	Eip75B -	chr3L	18056792	intron	Eip75B -	chr3L_8_18050001	chr3L_18050001	CK1_1-HE
1938	chr3L	18506133	18506158	chr3L	18509597	18509622	F-element	6	3464	3.0	3.0	3.0	1.5	3489	chr3L	18506133	intergenic	not near genes	chr3L	18507878	intergenic	not near genes	chr3L	18509622	intergenic	not near genes	chr3L_6_18505001	chr3L_18505001	CK1_1-HE
1939	chr3L	18514902	18514934	chr3L	18520097	18520126	BS	4	5194	0.0	1.5	0.8	2.2	5224	chr3L	18514902	intergenic	not near genes	chr3L	18517514	intergenic	not near genes	chr3L	18520126	intergenic	not near genes	chr3L_4_18515001	chr3L_18515001	CK1_1-HE
1940	chr3L	18528639	18528656	chr3L	18537824	18537841	roo	14	9185	5.0	8.0	6.5	1.9	9202	chr3L	18528639	intergenic	not near genes	chr3L	18533240	intergenic	not near genes	chr3L	18537841	intergenic	not near genes	chr3L_14_18530001	chr3L_18530001	CK1_1-HE
1944	chr3L	18593954	18593972	chr3L	18595935	18595953	Doc	6	1981	6.5	2.0	4.2	1.2	1999	chr3L	18593954	intergenic	term -	chr3L	18594954	intergenic	not near genes	chr3L	18595953	intergenic	CR45389 +	chr3L_6_18590001	chr3L_18590001	CK1_1-HE
1951	chr3L	18710756	18710792	chr3L	18718709	18718745	Stalker2	36	7953	4.5	9.0	6.8	4.6	7989	chr3L	18710756	intergenic	not near genes	chr3L	18714750	intergenic	not near genes	chr3L	18718745	intergenic	not near genes	chr3L_36_18710001	chr3L_18710001	CK1_1-HE
1954	chr3L	18772407	18772442	chr3L	18781089	18781124	roo	59	8682	13.5	15.0	14.2	3.9	8717	chr3L	18772407	intron	ftz-f1 -	chr3L	18776766	intron	ftz-f1 -	chr3L	18781124	intron	ftz-f1 -	chr3L_59_18775001	chr3L_18775001	CK1_1-HE
1960	chr3L	18833776	18833815	chr3L	18834941	18834968	1360	23	1164	5.0	6.0	5.5	3.5	1192	chr3L	18833776	intron	Indy -	chr3L	18834372	intron	Indy -	chr3L	18834968	intron	Indy -	chr3L_23_18830001	chr3L_18830001	CK1_1-HE
1969	chr3L	19008836	19008873	chr3L	19009176	19009212	jockey	18	339	6.5	9.0	7.8	2.0	376	chr3L	19008836	intron	nkd -	chr3L	19009024	intron	nkd -	chr3L	19009212	intron	nkd -	chr3L_18_19005001	chr3L_19005001	CK1_1-HE
1974	chr3L	19115633	19115669	chr3L	19115813	19115849	BS	16	180	4.5	3.0	3.8	3.3	216	chr3L	19115633	intron	CG14082 -	chr3L	19115741	intron	CG14082 -	chr3L	19115849	intron	CG14082 -	chr3L_16_19115001	chr3L_19115001	CK1_1-HE
1975	chr3L	19117041	19117075	chr3L	19124489	19124523	mdg1	13	7448	2.5	7.5	5.0	2.2	7482	chr3L	19117041	intron	CG14082 -	chr3L	19120782	intron	CG14082 -	chr3L	19124523	intron	CG14082 -	chr3L_13_19120001	chr3L_19120001	CK1_1-HE
1977	chr3L	19208056	19208090	chr3L	19209431	19209465	Doc	28	1375	8.5	9.5	9.0	2.8	1409	chr3L	19208056	intron	fz2 -	chr3L	19208760	intron	fz2 -	chr3L	19209465	intron	fz2 -	chr3L_28_19205001	chr3L_19205001	CK1_1-HE
1992	chr3L	19820299	19820317	chr3L	19827849	19827867	412	6	7550	2.5	1.0	1.8	2.1	7568	chr3L	19820299	intron	Deaf1 +	chr3L	19824083	intron	Deaf1 +	chr3L	19827867	intron	Deaf1 +	chr3L_6_19820001	chr3L_19820001	CK1_1-HE
1995	chr3L	20040522	20040550	chr3L	20041061	20041089	invader3	13	539	6.0	8.0	7.0	1.6	567	chr3L	20040522	intergenic	not near genes	chr3L	20040806	intergenic	not near genes	chr3L	20041089	intergenic	not near genes	chr3L_13_20040001	chr3L_20040001	CK1_1-HE
1999	chr3L	20113661	20113690	chr3L	20122919	20122948	roo	8	9258	2.5	0.0	1.2	3.6	9287	chr3L	20113661	intergenic	not near genes	chr3L	20118304	intergenic	not near genes	chr3L	20122948	intergenic	not near genes	chr3L_8_20115001	chr3L_20115001	CK1_1-HE
2003	chr3L	20257332	20257359	chr3L	20258453	20258480	pogo	13	1121	3.0	4.5	3.8	2.7	1148	chr3L	20257332	intron	rdgC +	chr3L	20257906	intron	rdgC +	chr3L	20258480	intron	rdgC +	chr3L_13_20255001	chr3L_20255001	CK1_1-HE
2007	chr3L	20476752	20476786	chr3L	20484352	20484386	springer	8	7600	3.0	2.5	2.8	2.1	7634	chr3L	20476752	3` UTR	isoQC +	chr3L	20480569	intergenic	not near genes	chr3L	20484386	3` UTR	ZnT77C -	chr3L_8_20480001	chr3L_20480001	CK1_1-HE
2010	chr3L	20590062	20590097	chr3L	20590602	20590626	412	20	538	6.5	7.0	6.8	2.6	564	chr3L	20590062	intergenic	not near genes	chr3L	20590344	intergenic	not near genes	chr3L	20590626	intergenic	not near genes	chr3L_20_20590001	chr3L_20590001	CK1_1-HE
2015	chr3L	20821293	20821307	chr3L	20824763	20824777	NOF	6	3470	2.0	4.5	3.2	1.4	3484	chr3L	20821293	intron	Pka-R1 +	chr3L	20823035	intron	Pka-R1 +	chr3L	20824777	intron	Pka-R1 +	chr3L_6_20820001	chr3L_20820001	CK1_1-HE
2022	chr3L	21014912	21014948	chr3L	21023394	21023430	Tirant	49	8481	15.5	18.5	17.0	2.7	8518	chr3L	21014912	intron	skd -	chr3L	21019171	intron	skd -	chr3L	21023430	intron	skd -	chr3L_49_21015001	chr3L_21015001	CK1_1-HE
2027	chr3L	21151864	21151897	chr3L	21156949	21156982	flea	23	5084	2.5	4.5	3.5	5.1	5118	chr3L	21151864	intron	Ac78C -	chr3L	21154423	intron	Ac78C -	chr3L	21156982	intron	Ac78C -	chr3L_23_21150001	chr3L_21150001	CK1_1-HE
2031	chr3L	21306145	21306181	chr3L	21315305	21315341	roo	15	9160	4.5	3.5	4.0	3.0	9196	chr3L	21306145	3` UTR,3` UTR	CG7632 +,Pc -	chr3L	21310743	intron	Pc -	chr3L	21315341	3` UTR	Pc -	chr3L_15_21310001	chr3L_21310001	CK1_1-HE
2033	chr3L	21372725	21372751	chr3L	21379234	21379260	McClintock	14	6509	7.5	7.0	7.2	1.7	6535	chr3L	21372725	intergenic	not near genes	chr3L	21375992	intergenic	not near genes	chr3L	21379260	intergenic	not near genes	chr3L_14_21375001	chr3L_21375001	CK1_1-HE
2037	chr3L	21498842	21498870	chr3L	21500479	21500507	1360	13	1636	4.0	8.5	6.2	1.8	1665	chr3L	21498842	intron	Glg1 -	chr3L	21499674	intron	Glg1 -	chr3L	21500507	intron	Glg1 -	chr3L_13_21495001	chr3L_21495001	CK1_1-HE
2042	chr3L	21749315	21749344	chr3L	21754476	21754505	Doc	14	5161	2.0	5.0	3.5	3.1	5190	chr3L	21749315	intron	Syn1 -	chr3L	21751910	intron	Syn1 -	chr3L	21754505	intron	Syn1 -	chr3L_14_21750001	chr3L_21750001	CK1_1-HE
2050	chr3L	22099673	22099705	chr3L	22105860	22105892	3S18	8	6187	3.0	6.0	4.5	1.5	6219	chr3L	22099673	intergenic	not near genes	chr3L	22102782	intergenic	not near genes	chr3L	22105892	intergenic	not near genes	chr3L_8_22100001	chr3L_22100001	CK1_1-HE
2068	chr3L	22555769	22555803	chr3L	22563240	22563274	blood	11	7471	4.5	4.5	4.5	2.0	7505	chr3L	22555769	intergenic	not near genes	chr3L	22559522	intergenic	not near genes	chr3L	22563274	intergenic	not near genes	chr3L_11_22555001	chr3L_22555001	CK1_1-HE
2069	chr3L	22577618	22577645	chr3L	22582407	22582434	Doc	11	4789	6.5	6.5	6.5	1.5	4816	chr3L	22577618	intergenic	not near genes	chr3L	22580026	intergenic	not near genes	chr3L	22582434	3` UTR	CG14459 -	chr3L_11_22580001	chr3L_22580001	CK1_1-HE
2070	chr3L	22617187	22617223	chr3L	22624640	22624676	blood	7	7453	3.0	1.5	2.2	2.2	7489	chr3L	22617187	intron	CG14459 -	chr3L	22620932	intron	CG14459 -	chr3L	22624676	intron	CG14459 -	chr3L_7_22620001	chr3L_22620001	CK1_1-HE
2075	chr3L	22761387	22761419	chr3L	22766822	22766854	Ivk	15	5435	6.0	9.0	7.5	1.8	5467	chr3L	22761387	intron	SPoCk +	chr3L	22764120	intron	SPoCk +	chr3L	22766854	intron	SPoCk +	chr3L_15_22760001	chr3L_22760001	CK1_1-HE
2076	chr3L	22775854	22775888	chr3L	22776684	22776718	INE-1	11	830	24.5	19.5	22.0	0.5	864	chr3L	22775854	intron	SPoCk +	chr3L	22776286	intron	SPoCk +	chr3L	22776718	intron	SPoCk +	chr3L_11_22775001	chr3L_22775001	CK1_1-HE
2078	chr3L	22857350	22857375	chr3L	22857761	22857786	INE-1	7	411	5.0	2.5	3.8	1.5	436	chr3L	22857350	intergenic	not near genes	chr3L	22857568	intergenic	not near genes	chr3L	22857786	intergenic	not near genes	chr3L_7_22855001	chr3L_22855001	CK1_1-HE
2079	chr3L	22865979	22866001	chr3L	22867113	22867135	Doc	5	1134	3.5	1.5	2.5	1.4	1156	chr3L	22865979	intron	CG33170 +	chr3L	22866557	intron	CG33170 +	chr3L	22867135	intron	CG33170 +	chr3L_5_22865001	chr3L_22865001	CK1_1-HE
2084	chr3L	22989859	22989894	chr3L	22996834	22996869	297	19	6975	7.0	4.0	5.5	2.9	7010	chr3L	22989859	intergenic	not near genes	chr3L	22993364	intergenic	not near genes	chr3L	22996869	intergenic	not near genes	chr3L_19_22990001	chr3L_22990001	CK1_1-HE
2085	chr3L	23042223	23042251	chr3L	23048977	23049005	gypsy6	8	6754	1.5	1.0	1.2	3.6	6782	chr3L	23042223	intergenic	not near genes	chr3L	23045614	intergenic	not near genes	chr3L	23049005	intergenic	not near genes	chr3L_8_23045001	chr3L_23045001	CK1_1-HE
2090	chr3L	23290488	23290516	chr3L	23295322	23295350	X-element	21	4834	8.0	9.5	8.8	2.1	4862	chr3L	23290488	intergenic	not near genes	chr3L	23292919	intergenic	not near genes	chr3L	23295350	intergenic	not near genes	chr3L_21_23290001	chr3L_23290001	CK1_1-HE
2095	chr3L	23973985	23974009	chr3L	23974461	23974485	Dm88	10	476	15.0	20.0	17.5	0.5	500	chr3L	23973985	intron	CG40470 -	chr3L	23974235	intron	CG40470 -	chr3L	23974485	intron	CG40470 -	chr3L_10_23970001	chr3L_23970001	CK1_1-HE
2096	chr3L	24021275	24021308	chr3L	24022433	24022466	1360	9	1158	2.0	1.0	1.5	3.6	1191	chr3L	24021275	intergenic	not near genes	chr3L	24021870	intergenic	not near genes	chr3L	24022466	intergenic	not near genes	chr3L_9_24020001	chr3L_24020001	CK1_1-HE
2099	chr3L	24168788	24168822	chr3L	24176114	24176151	ZAM	27	7327	4.5	7.0	5.8	4.0	7363	chr3L	24168788	intron	Snap25 +	chr3L	24172470	intron	Snap25 +	chr3L	24176151	intron	Snap25 +	chr3L_27_24170001	chr3L_24170001	CK1_1-HE
2103	chr3L	24791899	24791918	chr3L	24796679	24796698	Doc	6	4780	5.0	2.0	3.5	1.3	4799	chr3L	24791899	intergenic	not near genes	chr3L	24794298	intergenic	not near genes	chr3L	24796698	intergenic	not near genes	chr3L_6_24790001	chr3L_24790001	CK1_1-HE
2107	chr3L	25628498	25628527	chr3L	25633270	25633299	F-element	21	4772	14.5	11.0	12.8	1.5	4801	chr3L	25628498	intron	CG41343 -	chr3L	25630898	intron	CG41343 -	chr3L	25633299	intron	CG41343 -	chr3L_21_25630001	chr3L_25630001	CK1_1-HE
2108	chr3L	25824677	25824680	chr3L	27273495	27273498	F-element	7	1448818	96.5	15.0	55.8	0.1	1448821	chr3L	25824677	intron	CG40178 -	chr3L	26549088	intergenic	not near genes	chr3L	27273498	intergenic	not near genes	chr3L_7_26545001	chr3L_26545001	CK1_1-HE
2115	chr3L	27858906	27859078	chr3L	27859374	27859408	INE-1	6	353	55.0	59.5	57.2	0.1	502	chr3L	27858906	intergenic	not near genes	chr3L	27859157	intergenic	not near genes	chr3L	27859408	intergenic	not near genes	chr3L_6_27855001	chr3L_27855001	CK1_1-HE
2116	chr3L	27980695	27980730	chr3L	27985494	27985529	Doc	13	4799	0.0	4.0	2.0	4.3	4834	chr3L	27980695	intron	CG17514 -	chr3L	27983112	intron	CG17514 -	chr3L	27985529	intron	CG17514 -	chr3L_13_27980001	chr3L_27980001	CK1_1-HE
2129	chr3R	4105041	4105046	chr3R	4110246	4110251	copia	4	5205	5.0	2.5	3.8	0.8	5210	chr3R	4105041	intergenic	not near genes	chr3R	4107646	intergenic	not near genes	chr3R	4110251	intergenic	not near genes	chr3R_4_4105001	chr3R_4105001	CK1_1-HE
2132	chr3R	4206083	4206088	chr3R	4211659	4211664	mdg3	4	5576	1.0	2.5	1.8	1.4	5581	chr3R	4206083	intron	CG14636 -	chr3R	4208874	intron	CG14636 -	chr3R	4211664	intron	CG14636 -	chr3R_4_4205001	chr3R_4205001	CK1_1-HE
2133	chr3R	4366754	4366790	chr3R	4375138	4375174	roo	14	8384	2.0	5.0	3.5	3.1	8420	chr3R	4366754	3` UTR	CG1090 +	chr3R	4370964	intergenic	not near genes	chr3R	4375174	5` UTR	CR44922 +	chr3R_14_4370001	chr3R_4370001	CK1_1-HE
2134	chr3R	4408411	4408440	chr3R	4412716	4412745	Juan	10	4305	4.0	3.5	3.8	2.1	4334	chr3R	4408411	intron	CG32944 -	chr3R	4410578	intron	CG32944 -	chr3R	4412745	intron	CG32944 -	chr3R_10_4410001	chr3R_4410001	CK1_1-HE
2136	chr3R	4538900	4538912	chr3R	4540161	4540173	1360	15	1261	6.0	13.5	9.8	1.4	1273	chr3R	4538900	intron	CG34357 -	chr3R	4539536	intron	CG34357 -	chr3R	4540173	intron	CG34357 -	chr3R_15_4535001	chr3R_4535001	CK1_1-HE
2140	chr3R	4609544	4609582	chr3R	4610709	4610747	1360	23	1165	9.0	6.5	7.8	2.6	1203	chr3R	4609544	intergenic	not near genes	chr3R	4610146	intergenic	not near genes	chr3R	4610747	intergenic	not near genes	chr3R_23_4610001	chr3R_4610001	CK1_1-HE
2142	chr3R	4636600	4636614	chr3R	4637021	4637035	INE-1	6	421	7.0	4.0	5.5	0.9	435	chr3R	4636600	intergenic	not near genes	chr3R	4636818	intergenic	not near genes	chr3R	4637035	intergenic	not near genes	chr3R_6_4635001	chr3R_4635001	CK1_1-HE
2143	chr3R	4636622	4636626	chr3R	4637043	4637047	INE-1	4	421	4.5	9.0	6.8	0.5	425	chr3R	4636622	intergenic	not near genes	chr3R	4636834	intergenic	not near genes	chr3R	4637047	intergenic	not near genes	chr3R_4_4635001	chr3R_4635001	CK1_1-HE
2145	chr3R	4753239	4753268	chr3R	4757543	4757572	F-element	20	4304	5.5	3.5	4.5	3.6	4333	chr3R	4753239	intron,intron	atms +,CG44098 -	chr3R	4755406	intron,intron	atms +,CG44098 -	chr3R	4757572	intron,exon	atms +,CG44098 -	chr3R_20_4755001	chr3R_4755001	CK1_1-HE
2146	chr3R	4759723	4759741	chr3R	4761221	4761239	hopper2	7	1498	4.5	6.0	5.2	1.1	1516	chr3R	4759723	intron,intron	atms +,CG44098 -	chr3R	4760481	intron,intron	atms +,CG44098 -	chr3R	4761239	intron,intron	atms +,CG44098 -	chr3R_7_4760001	chr3R_4760001	CK1_1-HE
2151	chr3R	4887477	4887512	chr3R	4894855	4894890	rover	17	7378	4.0	9.5	6.8	2.2	7413	chr3R	4887477	intergenic	not near genes	chr3R	4891184	intergenic	not near genes	chr3R	4894890	intergenic	not near genes	chr3R_17_4890001	chr3R_4890001	CK1_1-HE
2157	chr3R	5045843	5045871	chr3R	5052946	5052974	HMS-Beagle	17	7103	4.5	2.5	3.5	3.8	7131	chr3R	5045843	intron	CR43635 -	chr3R	5049408	intergenic	not near genes	chr3R	5052974	intergenic	CR45588 -	chr3R_17_5045001	chr3R_5045001	CK1_1-HE
2158	chr3R	5067980	5068014	chr3R	5073498	5073532	mdg3	22	5518	4.5	2.0	3.2	5.2	5552	chr3R	5067980	intergenic	not near genes	chr3R	5070756	intergenic	not near genes	chr3R	5073532	intergenic	not near genes	chr3R_22_5070001	chr3R_5070001	CK1_1-HE
2163	chr3R	5338395	5338396	chr3R	5343573	5343574	Rt1c	4	5178	31.0	12.5	21.8	0.2	5179	chr3R	5338395	intron	mtd -	chr3R	5340984	intron	mtd -	chr3R	5343574	intron	mtd -	chr3R_4_5340001	chr3R_5340001	CK1_1-HE
2164	chr3R	5338400	5338429	chr3R	5343578	5343607	Rt1c	19	5178	12.5	15.0	13.8	1.3	5207	chr3R	5338400	intron	mtd -	chr3R	5341004	intron	mtd -	chr3R	5343607	intron	mtd -	chr3R_19_5340001	chr3R_5340001	CK1_1-HE
2166	chr3R	5445963	5445983	chr3R	5452424	5452444	Burdock	5	6461	2.0	1.0	1.5	2.0	6481	chr3R	5445963	intron	CG14669 +	chr3R	5449204	intron	CG14669 +	chr3R	5452444	intron	CG14669 +	chr3R_5_5445001	chr3R_5445001	CK1_1-HE
2168	chr3R	5747024	5747047	chr3R	5753216	5753239	diver	4	6192	0.5	0.5	0.5	2.7	6215	chr3R	5747024	intergenic	Madm +	chr3R	5750132	intergenic	not near genes	chr3R	5753239	intergenic	CG2091 -	chr3R_4_5750001	chr3R_5750001	CK1_1-HE
2169	chr3R	5809118	5809145	chr3R	5809360	5809387	pogo	10	242	3.5	2.5	3.0	2.5	269	chr3R	5809118	3` UTR	CG11000 +	chr3R	5809252	3` UTR	CG11000 +	chr3R	5809387	3` UTR	CG11000 +	chr3R_10_5805001	chr3R_5805001	CK1_1-HE
2170	chr3R	5822376	5822413	chr3R	5823544	5823581	1360	10	1168	2.5	0.0	1.2	4.5	1205	chr3R	5822376	3` UTR	CG2023 -	chr3R	5822978	3` UTR	CG2023 -	chr3R	5823581	3` UTR	CG2023 -	chr3R_10_5820001	chr3R_5820001	CK1_1-HE
2173	chr3R	5927560	5927588	chr3R	5927801	5927829	pogo	7	240	2.0	2.0	2.0	2.3	269	chr3R	5927560	intron	CG34113 -	chr3R	5927694	intron	CG34113 -	chr3R	5927829	intron	CG34113 -	chr3R_7_5925001	chr3R_5925001	CK1_1-HE
2174	chr3R	6015960	6015993	chr3R	6024442	6024475	Tirant	12	8482	4.5	3.5	4.0	2.4	8515	chr3R	6015960	intergenic	not near genes	chr3R	6020218	intergenic	not near genes	chr3R	6024475	intergenic	not near genes	chr3R_12_6020001	chr3R_6020001	CK1_1-HE
2178	chr3R	6158509	6158542	chr3R	6167093	6167126	Tirant	11	8583	1.5	4.5	3.0	2.8	8617	chr3R	6158509	intergenic	not near genes	chr3R	6162818	intergenic	not near genes	chr3R	6167126	intergenic	CG1077 +	chr3R_11_6160001	chr3R_6160001	CK1_1-HE
2179	chr3R	6175175	6175199	chr3R	6182448	6182472	HMS-Beagle2	4	7273	5.0	2.5	3.8	0.8	7297	chr3R	6175175	intergenic	Osi1 +	chr3R	6178824	intron	CR45194 +	chr3R	6182472	intergenic	CR45194 +	chr3R_4_6175001	chr3R_6175001	CK1_1-HE
2180	chr3R	6206291	6206315	chr3R	6206509	6206533	BS	8	218	2.0	3.0	2.5	2.3	242	chr3R	6206291	exon	Osi24 +	chr3R	6206412	intron	Osi24 +	chr3R	6206533	intron	Osi24 +	chr3R_8_6205001	chr3R_6205001	CK1_1-HE
2187	chr3R	6510025	6510054	chr3R	6515107	6515136	jockey	16	5082	5.5	3.5	4.5	2.9	5111	chr3R	6510025	intergenic	not near genes	chr3R	6512580	intergenic	not near genes	chr3R	6515136	intergenic	not near genes	chr3R_16_6510001	chr3R_6510001	CK1_1-HE
2197	chr3R	6737496	6737527	chr3R	6739284	6739315	Doc	11	1788	4.0	4.5	4.2	2.1	1819	chr3R	6737496	intron	pb -	chr3R	6738406	intron	pb -	chr3R	6739315	intron	pb -	chr3R_11_6735001	chr3R_6735001	CK1_1-HE
2226	chr3R	7694574	7694610	chr3R	7713636	7713672	invader3	11	19062	2.0	3.0	2.5	3.1	19098	chr3R	7694574	3` UTR	Nlg1 +	chr3R	7704123	intergenic	not near genes	chr3R	7713672	intergenic	not near genes	chr3R_11_7700001	chr3R_7700001	CK1_1-HE
2228	chr3R	7729463	7729498	chr3R	7737402	7737437	Stalker2	28	7939	10.0	12.0	11.0	2.3	7974	chr3R	7729463	intergenic	not near genes	chr3R	7733450	intergenic	not near genes	chr3R	7737437	intergenic	not near genes	chr3R_28_7730001	chr3R_7730001	CK1_1-HE
2231	chr3R	7849642	7849673	chr3R	7850810	7850841	1360	14	1168	3.5	4.0	3.8	2.9	1199	chr3R	7849642	intron	CG34384 +	chr3R	7850242	intron	CG34384 +	chr3R	7850841	intron	CG34384 +	chr3R_14_7850001	chr3R_7850001	CK1_1-HE
2234	chr3R	7973320	7973341	chr3R	7974383	7974404	1360	6	1063	2.5	5.0	3.8	1.2	1084	chr3R	7973320	intergenic	not near genes	chr3R	7973862	intergenic	not near genes	chr3R	7974404	intergenic	CD98hc -	chr3R_6_7970001	chr3R_7970001	CK1_1-HE
2236	chr3R	8090565	8090571	chr3R	8094043	8094049	297	6	3478	11.0	19.0	15.0	0.4	3484	chr3R	8090565	intergenic	CR44330 +	chr3R	8092307	intergenic	not near genes	chr3R	8094049	intergenic	CG7900 +	chr3R_6_8090001	chr3R_8090001	CK1_1-HE
2237	chr3R	8094409	8094441	chr3R	8099715	8099747	Transpac	16	5306	5.5	7.0	6.2	2.2	5338	chr3R	8094409	intron	CG7900 +	chr3R	8097078	intron	CG7900 +	chr3R	8099747	intron	CG7900 +	chr3R_16_8095001	chr3R_8095001	CK1_1-HE
2238	chr3R	8101763	8101793	chr3R	8104847	8104878	G2	15	3085	7.0	8.0	7.5	1.8	3115	chr3R	8101763	exon	CG7900 +	chr3R	8103320	intron	CG7900 +	chr3R	8104878	3` UTR	CG7900 +	chr3R_15_8100001	chr3R_8100001	CK1_1-HE
2241	chr3R	8207552	8207583	chr3R	8208398	8208429	F-element	13	844	2.0	2.5	2.2	4.1	877	chr3R	8207552	intergenic	not near genes	chr3R	8207990	intergenic	not near genes	chr3R	8208429	intergenic	not near genes	chr3R_13_8205001	chr3R_8205001	CK1_1-HE
2244	chr3R	8403004	8403040	chr3R	8412171	8412207	roo	36	9167	13.0	16.5	14.8	2.3	9203	chr3R	8403004	intron	CG45263 -	chr3R	8407606	intron	CG45263 -	chr3R	8412207	intron	CG45263 -	chr3R_36_8405001	chr3R_8405001	CK1_1-HE
2249	chr3R	8570477	8570501	chr3R	8575114	8575138	HMS-Beagle	4	4637	5.0	0.5	2.8	1.1	4661	chr3R	8570477	intergenic	not near genes	chr3R	8572808	intergenic	not near genes	chr3R	8575138	intergenic	not near genes	chr3R_4_8570001	chr3R_8570001	CK1_1-HE
2251	chr3R	8601770	8601797	chr3R	8610924	8610951	roo	10	9154	6.0	7.0	6.5	1.3	9181	chr3R	8601770	intron	5-HT2B +	chr3R	8606360	intron	5-HT2B +	chr3R	8610951	intron	5-HT2B +	chr3R_10_8605001	chr3R_8605001	CK1_1-HE
2252	chr3R	8707354	8707385	chr3R	8709796	8709827	jockey	30	2442	15.5	12.0	13.8	2.0	2473	chr3R	8707354	intergenic	not near genes	chr3R	8708590	intergenic	not near genes	chr3R	8709827	intergenic	not near genes	chr3R_30_8705001	chr3R_8705001	CK1_1-HE
2256	chr3R	8894869	8894904	chr3R	8896026	8896061	1360	31	1157	10.0	12.0	11.0	2.6	1192	chr3R	8894869	intron	pyd -	chr3R	8895465	intron	pyd -	chr3R	8896061	intron	pyd -	chr3R_31_8895001	chr3R_8895001	CK1_1-HE
2272	chr3R	9278780	9278808	chr3R	9284041	9284069	Rt1a	9	5261	3.5	3.0	3.2	2.1	5289	chr3R	9278780	intergenic	not near genes	chr3R	9281424	intergenic	not near genes	chr3R	9284069	intergenic	not near genes	chr3R_9_9280001	chr3R_9280001	CK1_1-HE
2276	chr3R	9304529	9304540	chr3R	9311817	9311828	Stalker4	5	7288	9.0	4.0	6.5	0.7	7299	chr3R	9304529	intron	CG8861 -	chr3R	9308178	intron	CG8861 -	chr3R	9311828	intron	CG8861 -	chr3R_5_9305001	chr3R_9305001	CK1_1-HE
2277	chr3R	9319569	9319603	chr3R	9320005	9320039	jockey	14	436	9.5	4.5	7.0	1.8	470	chr3R	9319569	intron	CG8861 -	chr3R	9319804	intron	CG8861 -	chr3R	9320039	intron	CG8861 -	chr3R_14_9315001	chr3R_9315001	CK1_1-HE
2280	chr3R	9361814	9361843	chr3R	9362056	9362085	pogo	18	242	10.0	6.0	8.0	2.0	271	chr3R	9361814	3` UTR	CG45050 +	chr3R	9361950	3` UTR	CG45050 +	chr3R	9362085	3` UTR	CG45050 +	chr3R_18_9360001	chr3R_9360001	CK1_1-HE
2287	chr3R	9699971	9700002	chr3R	9700061	9700092	1360	10	90	4.5	5.0	4.8	1.7	121	chr3R	9699971	intron	Unc-115a -	chr3R	9700032	intron	Unc-115a -	chr3R	9700092	intron	Unc-115a -	chr3R_10_9700001	chr3R_9700001	CK1_1-HE
2293	chr3R	10231791	10231815	chr3R	10237369	10237393	mdg3	10	5578	1.0	2.5	1.8	3.6	5602	chr3R	10231791	intron	CG42795 +	chr3R	10234592	intron	CG42795 +	chr3R	10237393	intron	CG42795 +	chr3R_10_10230001	chr3R_10230001	CK1_1-HE
2323	chr3R	11379233	11379269	chr3R	11388389	11388425	roo	38	9155	11.0	8.0	9.5	3.6	9192	chr3R	11379233	intron	pros +	chr3R	11383829	intron	pros +	chr3R	11388425	intron	pros +	chr3R_38_11380001	chr3R_11380001	CK1_1-HE
2336	chr3R	11841060	11841098	chr3R	11846252	11846290	BS	21	5192	6.5	9.5	8.0	2.3	5230	chr3R	11841060	intron	CG6959 -	chr3R	11843675	intron	CG6959 -	chr3R	11846290	intron	CG6959 -	chr3R_21_11840001	chr3R_11840001	CK1_1-HE
2343	chr3R	12022893	12022907	chr3R	12025071	12025085	pogo	5	2178	3.0	4.5	3.8	1.0	2192	chr3R	12022893	intergenic	not near genes	chr3R	12023989	intergenic	not near genes	chr3R	12025085	intergenic	not near genes	chr3R_5_12020001	chr3R_12020001	CK1_1-HE
2356	chr3R	12572177	12572181	chr3R	20947072	20947075	diver	4	8374895	17.5	17.5	17.5	0.2	8374898	chr3R	12572177	intron	Octbeta2R -	chr3R	16759626	intron	bxd -	chr3R	20947075	intergenic	not near genes	chr3R_4_16755001	chr3R_16755001	CK1_1-HE
2362	chr3R	12920149	12920180	chr3R	12925353	12925384	copia	16	5204	9.5	8.5	9.0	1.6	5235	chr3R	12920149	intron	beat-Vb +	chr3R	12922766	intron	beat-Vb +	chr3R	12925384	intron	beat-Vb +	chr3R_16_12920001	chr3R_12920001	CK1_1-HE
2371	chr3R	13135826	13135858	chr3R	13138002	13138034	pogo	9	2176	4.0	3.5	3.8	1.9	2208	chr3R	13135826	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13136930	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13138034	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R_9_13135001	chr3R_13135001	CK1_1-HE
2372	chr3R	13143030	13143066	chr3R	13148608	13148644	mdg3	28	5578	5.0	6.5	5.8	4.1	5614	chr3R	13143030	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13145837	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13148644	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R_28_13145001	chr3R_13145001	CK1_1-HE
2381	chr3R	13517230	13517240	chr3R	13520037	13520058	jockey	6	2816	6.0	6.5	6.2	0.8	2828	chr3R	13517230	intergenic	not near genes	chr3R	13518644	intergenic	not near genes	chr3R	13520058	intergenic	not near genes	chr3R_6_13515001	chr3R_13515001	CK1_1-HE
2396	chr3R	14021646	14021680	chr3R	14023464	14023498	S-element	28	1818	8.5	8.0	8.2	3.0	1852	chr3R	14021646	intron	rdx -	chr3R	14022572	intron	rdx -	chr3R	14023498	intron	rdx -	chr3R_28_14020001	chr3R_14020001	CK1_1-HE
2405	chr3R	14180810	14180837	chr3R	14185576	14185603	F-element	14	4766	3.5	0.0	1.8	5.0	4793	chr3R	14180810	intron	Dop1R1 -	chr3R	14183206	intron	Dop1R1 -	chr3R	14185603	intron	Dop1R1 -	chr3R_14_14180001	chr3R_14180001	CK1_1-HE
2406	chr3R	14246400	14246417	chr3R	14247897	14247914	jockey	6	1497	2.0	4.0	3.0	1.5	1514	chr3R	14246400	intergenic	not near genes	chr3R	14247157	intergenic	not near genes	chr3R	14247914	intergenic	not near genes	chr3R_6_14245001	chr3R_14245001	CK1_1-HE
2432	chr3R	15041424	15041459	chr3R	15045193	15045228	Doc	23	3769	4.5	6.0	5.2	3.7	3804	chr3R	15041424	intergenic	not near genes	chr3R	15043326	intergenic	not near genes	chr3R	15045228	intergenic	not near genes	chr3R_23_15040001	chr3R_15040001	CK1_1-HE
2436	chr3R	15079805	15079836	chr3R	15080047	15080078	pogo	9	242	4.0	6.0	5.0	1.5	273	chr3R	15079805	3` UTR	CG6966 -	chr3R	15079942	3` UTR	CG6966 -	chr3R	15080078	3` UTR	CG6966 -	chr3R_9_15075001	chr3R_15075001	CK1_1-HE
2437	chr3R	15102521	15102531	chr3R	15109776	15109786	412	5	7255	5.0	3.5	4.2	1.0	7265	chr3R	15102521	intron	CG42788 -	chr3R	15106154	intron	CG42788 -	chr3R	15109786	intron	CG42788 -	chr3R_5_15105001	chr3R_15105001	CK1_1-HE
2439	chr3R	15132058	15132075	chr3R	15135119	15135136	Juan	18	3061	17.5	22.0	19.8	0.9	3078	chr3R	15132058	intergenic	CG42788 -	chr3R	15133597	intergenic	not near genes	chr3R	15135136	intergenic	CG6912 -	chr3R_18_15130001	chr3R_15130001	CK1_1-HE
2440	chr3R	15132076	15132085	chr3R	15135116	15135146	Juan	13	3059	12.0	21.0	16.5	0.7	3070	chr3R	15132076	intergenic	CG42788 -	chr3R	15133611	intergenic	not near genes	chr3R	15135146	3` UTR	CG6912 -	chr3R_13_15130001	chr3R_15130001	CK1_1-HE
2442	chr3R	15162544	15162562	chr3R	15167313	15167331	F-element	16	4769	12.0	5.0	8.5	1.7	4787	chr3R	15162544	intron	Gyc88E +	chr3R	15164938	intron	Gyc88E +	chr3R	15167331	intron	Gyc88E +	chr3R_16_15160001	chr3R_15160001	CK1_1-HE
2452	chr3R	15601162	15601196	chr3R	15608685	15608719	412	23	7523	5.5	7.0	6.2	3.2	7557	chr3R	15601162	intergenic	not near genes	chr3R	15604940	intergenic	not near genes	chr3R	15608719	intergenic	not near genes	chr3R_23_15600001	chr3R_15600001	CK1_1-HE
2454	chr3R	15618749	15618763	chr3R	15626224	15626238	blood	11	7475	3.5	6.5	5.0	1.8	7489	chr3R	15618749	intergenic	not near genes	chr3R	15622494	intergenic	not near genes	chr3R	15626238	intergenic	not near genes	chr3R_11_15620001	chr3R_15620001	CK1_1-HE
2468	chr3R	16189408	16189443	chr3R	16189812	16189847	invader4	13	404	2.5	0.0	1.2	5.9	439	chr3R	16189408	intron	sra +	chr3R	16189628	intron	sra +	chr3R	16189847	intron	sra +	chr3R_13_16185001	chr3R_16185001	CK1_1-HE
2483	chr3R	16756323	16756341	chr3R	16762515	16762533	diver	11	6192	8.0	2.5	5.2	1.8	6210	chr3R	16756323	intron	bxd -	chr3R	16759428	intron	bxd -	chr3R	16762533	intron	bxd -	chr3R_11_16755001	chr3R_16755001	CK1_1-HE
2495	chr3R	17294664	17294693	chr3R	17295093	17295122	BS	7	429	5.0	3.0	4.0	1.4	458	chr3R	17294664	intergenic	not near genes	chr3R	17294893	intergenic	not near genes	chr3R	17295122	intergenic	not near genes	chr3R_7_17290001	chr3R_17290001	CK1_1-HE
2497	chr3R	17346688	17346716	chr3R	17348252	17348280	F-element	22	1564	4.0	8.5	6.2	3.1	1592	chr3R	17346688	intron	beat-IIa -	chr3R	17347484	intron	beat-IIa -	chr3R	17348280	intron	beat-IIa -	chr3R_22_17345001	chr3R_17345001	CK1_1-HE
2506	chr3R	17591284	17591314	chr3R	17591721	17591751	F-element	8	437	4.0	3.0	3.5	1.8	467	chr3R	17591284	intergenic	not near genes	chr3R	17591518	intergenic	not near genes	chr3R	17591751	intergenic	not near genes	chr3R_8_17590001	chr3R_17590001	CK1_1-HE
2507	chr3R	17638314	17638351	chr3R	17638801	17638838	roo	22	487	1.0	6.5	3.8	4.6	524	chr3R	17638314	intron	CG43175 +	chr3R	17638576	intron	CG43175 +	chr3R	17638838	intron,intron	CG43175 +,CR45222 +	chr3R_22_17635001	chr3R_17635001	CK1_1-HE
2509	chr3R	17657651	17657659	chr3R	17657803	17657811	INE-1	8	152	0.0	12.0	6.0	1.1	160	chr3R	17657651	intron	CG14322 +	chr3R	17657731	intron	CG14322 +	chr3R	17657811	intron	CG14322 +	chr3R_8_17655001	chr3R_17655001	CK1_1-HE
2512	chr3R	17763160	17763165	chr3R	17763647	17763652	roo	4	487	13.0	7.5	10.2	0.4	492	chr3R	17763160	5` UTR	TyrR -	chr3R	17763406	intergenic	TyrR -	chr3R	17763652	intergenic	TyrR -	chr3R_4_17760001	chr3R_17760001	CK1_1-HE
2518	chr3R	17925852	17925889	chr3R	17927320	17927357	hobo	26	1468	18.0	8.5	13.2	1.8	1505	chr3R	17925852	intron	cpo +	chr3R	17926604	intron	cpo +	chr3R	17927357	intron	cpo +	chr3R_26_17925001	chr3R_17925001	CK1_1-HE
2525	chr3R	18032785	18032803	chr3R	18040459	18040477	opus	9	7674	1.5	12.0	6.8	1.2	7692	chr3R	18032785	intergenic	not near genes	chr3R	18036631	intergenic	not near genes	chr3R	18040477	intergenic	not near genes	chr3R_9_18035001	chr3R_18035001	CK1_1-HE
2526	chr3R	18061583	18061613	chr3R	18063152	18063182	F-element	11	1569	9.5	4.0	6.8	1.4	1599	chr3R	18061583	intergenic	not near genes	chr3R	18062382	intergenic	not near genes	chr3R	18063182	intergenic	not near genes	chr3R_11_18060001	chr3R_18060001	CK1_1-HE
2561	chr3R	19193002	19193011	chr3R	19197307	19197316	F-element	5	4305	3.0	11.5	7.2	0.6	4314	chr3R	19193002	intron	CG31475 +	chr3R	19195159	intron	CG31475 +	chr3R	19197316	intron	CG31475 +	chr3R_5_19195001	chr3R_19195001	CK1_1-HE
2586	chr3R	20109538	20109571	chr3R	20114745	20114778	copia	11	5207	4.0	5.0	4.5	2.0	5240	chr3R	20109538	intergenic	not near genes	chr3R	20112158	intergenic	not near genes	chr3R	20114778	intergenic	CG10887 +	chr3R_11_20110001	chr3R_20110001	CK1_1-HE
2588	chr3R	20156690	20156721	chr3R	20165861	20165892	roo	10	9171	4.0	4.0	4.0	2.0	9202	chr3R	20156690	intergenic	not near genes	chr3R	20161291	intergenic	not near genes	chr3R	20165892	intergenic	not near genes	chr3R_10_20160001	chr3R_20160001	CK1_1-HE
2592	chr3R	20245278	20245303	chr3R	20248901	20248926	F-element	18	3623	4.5	5.0	4.8	3.1	3648	chr3R	20245278	3` UTR	Nlg4 +	chr3R	20247102	intergenic	not near genes	chr3R	20248926	intergenic	not near genes	chr3R_18_20245001	chr3R_20245001	CK1_1-HE
2595	chr3R	20266513	20266549	chr3R	20272985	20273021	Burdock	35	6472	8.0	15.0	11.5	2.8	6508	chr3R	20266513	intron	cic +	chr3R	20269767	intron	cic +	chr3R	20273021	intron	cic +	chr3R_35_20265001	chr3R_20265001	CK1_1-HE
2599	chr3R	20331002	20331029	chr3R	20331489	20331516	roo	8	487	2.5	3.0	2.8	2.1	514	chr3R	20331002	intergenic	Sirt2 +	chr3R	20331259	intergenic	Sirt2 +	chr3R	20331516	intergenic	not near genes	chr3R_8_20330001	chr3R_20330001	CK1_1-HE
2608	chr3R	20506586	20506614	chr3R	20507390	20507418	BS	6	804	3.5	5.0	4.2	1.2	832	chr3R	20506586	intergenic	Or92a +	chr3R	20507002	intergenic	CG4288 -	chr3R	20507418	3` UTR	CG4288 -	chr3R_6_20505001	chr3R_20505001	CK1_1-HE
2609	chr3R	20513001	20513026	chr3R	20515705	20515730	opus	4	2704	2.5	1.5	2.0	1.3	2729	chr3R	20513001	intergenic	not near genes	chr3R	20514366	intergenic	not near genes	chr3R	20515730	intergenic	not near genes	chr3R_4_20510001	chr3R_20510001	CK1_1-HE
2623	chr3R	20854470	20854518	chr3R	20859266	20859309	Doc	7	4793	0.0	3.0	1.5	2.8	4839	chr3R	20854470	intron	Ir93a -	chr3R	20856890	intron	Ir93a -	chr3R	20859309	exon	Ir93a -	chr3R_7_20855001	chr3R_20855001	CK1_1-HE
2633	chr3R	21141671	21141705	chr3R	21150153	21150187	Tirant	18	8482	7.0	5.0	6.0	2.6	8516	chr3R	21141671	intron	SNF4Agamma +	chr3R	21145929	intron	SNF4Agamma +	chr3R	21150187	intron	SNF4Agamma +	chr3R_18_21145001	chr3R_21145001	CK1_1-HE
2650	chr3R	21609003	21609041	chr3R	21611638	21611675	NOF	47	2634	4.0	14.5	9.2	4.6	2672	chr3R	21609003	intron	InR -	chr3R	21610339	intron	InR -	chr3R	21611675	intron	InR -	chr3R_47_21610001	chr3R_21610001	CK1_1-HE
2655	chr3R	21761118	21761155	chr3R	21768511	21768548	mdg1	8	7393	1.5	1.5	1.5	3.2	7430	chr3R	21761118	exon	CG42335 +	chr3R	21764833	intron	CG42335 +	chr3R	21768548	exon	CG42335 +	chr3R_8_21760001	chr3R_21760001	CK1_1-HE
2671	chr3R	22234692	22234714	chr3R	22236012	22236034	pogo	15	1320	8.5	13.5	11.0	1.2	1342	chr3R	22234692	intron	SKIP +	chr3R	22235363	intron	SKIP +	chr3R	22236034	intron	SKIP +	chr3R_15_22235001	chr3R_22235001	CK1_1-HE
2672	chr3R	22239489	22239499	chr3R	22248550	22248560	roo	4	9061	11.5	0.0	5.8	0.6	9071	chr3R	22239489	intron	SKIP +	chr3R	22244024	intron	SKIP +	chr3R	22248560	intron	SKIP +	chr3R_4_22240001	chr3R_22240001	CK1_1-HE
2676	chr3R	22450543	22450570	chr3R	22453184	22453211	NOF	10	2641	6.5	2.5	4.5	1.8	2668	chr3R	22450543	intron	CG34376 +	chr3R	22451877	intron	CG34376 +	chr3R	22453211	intron	CG34376 +	chr3R_10_22450001	chr3R_22450001	CK1_1-HE
2696	chr3R	22881201	22881209	chr3R	22884908	22884916	Doc	8	3707	5.0	0.5	2.8	2.1	3715	chr3R	22881201	intergenic	not near genes	chr3R	22883058	intergenic	not near genes	chr3R	22884916	intergenic	not near genes	chr3R_8_22880001	chr3R_22880001	CK1_1-HE
2719	chr3R	23684694	23684729	chr3R	23685181	23685216	roo	8	487	4.0	4.0	4.0	1.6	522	chr3R	23684694	exon	CG18754 +	chr3R	23684955	intron	CG18754 +	chr3R	23685216	exon	CG18754 +	chr3R_8_23680001	chr3R_23680001	CK1_1-HE
2724	chr3R	23835403	23835423	chr3R	23844554	23844574	roo	10	9151	8.5	0.5	4.5	1.8	9171	chr3R	23835403	intron	CG34355 +	chr3R	23839988	intron	CG34355 +	chr3R	23844574	intron	CG34355 +	chr3R_10_23835001	chr3R_23835001	CK1_1-HE
2736	chr3R	24072082	24072114	chr3R	24072521	24072553	jockey	31	439	16.0	15.5	15.8	1.8	471	chr3R	24072082	intron	4EHP -	chr3R	24072318	intron	4EHP -	chr3R	24072553	intron	4EHP -	chr3R_31_24070001	chr3R_24070001	CK1_1-HE
2738	chr3R	24076915	24076948	chr3R	24078383	24078416	hobo	26	1468	12.0	5.0	8.5	2.7	1501	chr3R	24076915	intron	4EHP -	chr3R	24077666	intron	4EHP -	chr3R	24078416	intron	4EHP -	chr3R_26_24075001	chr3R_24075001	CK1_1-HE
2743	chr3R	24207217	24207247	chr3R	24212294	24212324	flea	12	5077	7.5	6.0	6.8	1.5	5107	chr3R	24207217	intron	twin -	chr3R	24209770	intron	twin -	chr3R	24212324	intron	twin -	chr3R_12_24205001	chr3R_24205001	CK1_1-HE
2747	chr3R	24493273	24493310	chr3R	24493503	24493540	BS	28	230	3.5	6.5	5.0	4.7	267	chr3R	24493273	intergenic	not near genes	chr3R	24493406	intergenic	not near genes	chr3R	24493540	intergenic	not near genes	chr3R_28_24490001	chr3R_24490001	CK1_1-HE
2755	chr3R	24730096	24730116	chr3R	24732475	24732495	Doc	6	2379	4.0	0.5	2.2	1.9	2399	chr3R	24730096	intron	tok +	chr3R	24731296	intron	tok +	chr3R	24732495	intron	tok +	chr3R_6_24730001	chr3R_24730001	CK1_1-HE
2758	chr3R	24927125	24927134	chr3R	24931917	24931926	Doc	4	4792	3.5	1.0	2.2	1.2	4801	chr3R	24927125	intergenic	Trf4-2 +	chr3R	24929526	intergenic	not near genes	chr3R	24931926	intergenic	CG11771 +	chr3R_4_24925001	chr3R_24925001	CK1_1-HE
2777	chr3R	25725828	25725862	chr3R	25734989	25735023	roo	5	9161	1.5	3.0	2.2	1.6	9195	chr3R	25725828	intron	LpR2 -	chr3R	25730426	intron	LpR2 -	chr3R	25735023	intron	LpR2 -	chr3R_5_25730001	chr3R_25730001	CK1_1-HE
2779	chr3R	25832698	25832724	chr3R	25841881	25841907	roo	11	9183	2.5	7.0	4.8	1.9	9209	chr3R	25832698	exon	alpha4GT2 +	chr3R	25837302	intron	alpha4GT2 +	chr3R	25841907	exon	alpha4GT2 +	chr3R_11_25835001	chr3R_25835001	CK1_1-HE
2783	chr3R	26108823	26108841	chr3R	26117407	26117425	Tirant	6	8584	17.5	1.5	9.5	0.6	8602	chr3R	26108823	5` UTR	CG31324 +	chr3R	26113124	intron	CG31324 +	chr3R	26117425	intron	CG31324 +	chr3R_6_26110001	chr3R_26110001	CK1_1-HE
2796	chr3R	26376324	26376352	chr3R	26385485	26385513	roo	10	9161	7.5	0.5	4.0	2.0	9189	chr3R	26376324	intergenic	not near genes	chr3R	26380918	intergenic	not near genes	chr3R	26385513	intergenic	not near genes	chr3R_10_26380001	chr3R_26380001	CK1_1-HE
2801	chr3R	26510504	26510530	chr3R	26519566	26519592	roo	17	9062	7.5	9.0	8.2	1.8	9088	chr3R	26510504	intron	plum -	chr3R	26515048	intron	plum -	chr3R	26519592	intron,5` UTR	plum -,CR45226 +	chr3R_17_26515001	chr3R_26515001	CK1_1-HE
2804	chr3R	26558324	26558361	chr3R	26565637	26565674	Stalker4	14	7313	1.0	3.5	2.2	4.4	7350	chr3R	26558324	intron	scrib +	chr3R	26561999	intron	scrib +	chr3R	26565674	intron	scrib +	chr3R_14_26560001	chr3R_26560001	CK1_1-HE
2807	chr3R	26642731	26642756	chr3R	26643125	26643150	jockey	4	394	1.5	0.5	1.0	2.0	419	chr3R	26642731	intergenic	not near genes	chr3R	26642940	intergenic	not near genes	chr3R	26643150	intergenic	not near genes	chr3R_4_26640001	chr3R_26640001	CK1_1-HE
2811	chr3R	26810550	26810583	chr3R	26811036	26811069	roo	15	485	10.0	6.0	8.0	1.7	519	chr3R	26810550	intron	Tl +	chr3R	26810810	intron	Tl +	chr3R	26811069	intron	Tl +	chr3R_15_26810001	chr3R_26810001	CK1_1-HE
2817	chr3R	27007404	27007433	chr3R	27016540	27016569	roo	12	9136	5.5	6.5	6.0	1.7	9165	chr3R	27007404	intron	RYa-R +	chr3R	27011986	intron	RYa-R +	chr3R	27016569	intron	RYa-R +	chr3R_12_27010001	chr3R_27010001	CK1_1-HE
2823	chr3R	27140516	27140540	chr3R	27148127	27148151	412	11	7611	7.0	5.5	6.2	1.5	7635	chr3R	27140516	intron	CG6051 -	chr3R	27144334	intron	CG6051 -	chr3R	27148151	intron	CG6051 -	chr3R_11_27140001	chr3R_27140001	CK1_1-HE
2829	chr3R	27342801	27342825	chr3R	27351383	27351407	Tirant	4	8582	2.5	4.0	3.2	1.0	8606	chr3R	27342801	intron	CG42534 +	chr3R	27347104	intron	CG42534 +	chr3R	27351407	intron	CG42534 +	chr3R_4_27345001	chr3R_27345001	CK1_1-HE
2847	chr3R	27856756	27856789	chr3R	27858240	27858273	hopper2	30	1484	8.0	11.0	9.5	2.9	1517	chr3R	27856756	intron	CG34353 -	chr3R	27857514	intron	CG34353 -	chr3R	27858273	intron	CG34353 -	chr3R_30_27855001	chr3R_27855001	CK1_1-HE
2848	chr3R	27862952	27862987	chr3R	27868258	27868293	Transpac	17	5306	5.0	11.0	8.0	1.9	5341	chr3R	27862952	intron	CG34353 -	chr3R	27865622	intron	CG34353 -	chr3R	27868293	intron	CG34353 -	chr3R_17_27865001	chr3R_27865001	CK1_1-HE
2850	chr3R	27875697	27875732	chr3R	27882753	27882788	297	20	7056	4.5	8.0	6.2	2.8	7091	chr3R	27875697	intron	CG34353 -	chr3R	27879242	intron	CG34353 -	chr3R	27882788	intron	CG34353 -	chr3R_20_27875001	chr3R_27875001	CK1_1-HE
2853	chr3R	28068492	28068522	chr3R	28073935	28073965	I-element	5	5443	3.0	5.0	4.0	1.0	5473	chr3R	28068492	intron	CG34362 +	chr3R	28071228	intron	CG34362 +	chr3R	28073965	intron	CG34362 +	chr3R_5_28070001	chr3R_28070001	CK1_1-HE
2854	chr3R	28173670	28173705	chr3R	28181101	28181136	mdg1	7	7431	1.0	0.0	0.5	4.7	7466	chr3R	28173670	intron	CG34354 +	chr3R	28177403	intron	CG34354 +	chr3R	28181136	intron	CG34354 +	chr3R_7_28175001	chr3R_28175001	CK1_1-HE
2855	chr3R	28253336	28253370	chr3R	28255847	28255881	jockey	18	2511	7.0	2.5	4.8	3.1	2545	chr3R	28253336	intergenic	not near genes	chr3R	28254608	intergenic	not near genes	chr3R	28255881	intergenic	not near genes	chr3R_18_28250001	chr3R_28250001	CK1_1-HE
2866	chr3R	28758290	28758305	chr3R	28763908	28763923	roo	4	5618	6.5	0.0	3.2	1.0	5633	chr3R	28758290	intergenic	aqrs -	chr3R	28761106	intergenic	not near genes	chr3R	28763923	intergenic	not near genes	chr3R_4_28760001	chr3R_28760001	CK1_1-HE
2867	chr3R	28763901	28763919	chr3R	28771345	28771363	Stalker4	6	7444	0.0	0.5	0.2	5.0	7462	chr3R	28763901	intergenic	not near genes	chr3R	28767632	intergenic	not near genes	chr3R	28771363	intergenic	not near genes	chr3R_6_28765001	chr3R_28765001	CK1_1-HE
2869	chr3R	28792875	28792904	chr3R	28797971	28798000	jockey	6	5096	3.0	4.0	3.5	1.3	5125	chr3R	28792875	intergenic	not near genes	chr3R	28795438	intergenic	not near genes	chr3R	28798000	intergenic	not near genes	chr3R_6_28795001	chr3R_28795001	CK1_1-HE
2883	chr3R	29079382	29079412	chr3R	29080755	29080785	NOF	14	1373	10.0	5.0	7.5	1.6	1403	chr3R	29079382	intron	CG11873 +	chr3R	29080084	intron	CG11873 +	chr3R	29080785	intron	CG11873 +	chr3R_14_29080001	chr3R_29080001	CK1_1-HE
2891	chr3R	29319829	29319860	chr3R	29320149	29320181	jockey	5	321	4.5	3.0	3.8	1.0	352	chr3R	29319829	intergenic	Cnx99A -	chr3R	29320005	intergenic	Cnx99A -	chr3R	29320181	intergenic	not near genes	chr3R_5_29320001	chr3R_29320001	CK1_1-HE
2897	chr3R	29406616	29406646	chr3R	29407903	29407933	jockey	8	1287	2.5	3.0	2.8	2.1	1317	chr3R	29406616	intron	Ptp99A +	chr3R	29407274	intron	Ptp99A +	chr3R	29407933	intron	Ptp99A +	chr3R_8_29405001	chr3R_29405001	CK1_1-HE
2914	chr3R	29738262	29738297	chr3R	29739730	29739765	hobo	10	1468	1.5	1.0	1.2	4.5	1503	chr3R	29738262	intergenic	CG1969 +,CG7598 +	chr3R	29739014	intron	CG1969 +	chr3R	29739765	5` UTR	CG1969 +	chr3R_10_29735001	chr3R_29735001	CK1_1-HE
2918	chr3R	29882019	29882049	chr3R	29891177	29891207	roo	5	9158	2.0	5.5	3.8	1.0	9188	chr3R	29882019	intron	CG31038 +	chr3R	29886613	intron	CG31038 +	chr3R	29891207	intron	CG31038 +	chr3R_5_29885001	chr3R_29885001	CK1_1-HE
2922	chr3R	30084848	30084885	chr3R	30086316	30086353	hobo	18	1468	3.5	5.5	4.5	3.3	1505	chr3R	30084848	intron	sima +	chr3R	30085600	intron	sima +	chr3R	30086353	intron	sima +	chr3R_18_30085001	chr3R_30085001	CK1_1-HE
2928	chr3R	30238758	30238794	chr3R	30239923	30239960	1360	15	1165	1.5	0.0	0.8	8.3	1202	chr3R	30238758	intergenic	not near genes	chr3R	30239359	intergenic	not near genes	chr3R	30239960	intergenic	not near genes	chr3R_15_30235001	chr3R_30235001	CK1_1-HE
2933	chr3R	30317330	30317359	chr3R	30324923	30324952	roo	17	7593	0.5	4.5	2.5	4.9	7622	chr3R	30317330	intron	hdc +	chr3R	30321141	intron	hdc +	chr3R	30324952	intron	hdc +	chr3R_17_30320001	chr3R_30320001	CK1_1-HE
2937	chr3R	30375553	30375571	chr3R	30383177	30383195	412	4	7624	5.0	6.5	5.8	0.6	7642	chr3R	30375553	intergenic	not near genes	chr3R	30379374	intergenic	not near genes	chr3R	30383195	intergenic	not near genes	chr3R_4_30375001	chr3R_30375001	CK1_1-HE
2938	chr3R	30396220	30396247	chr3R	30404487	30404514	roo	12	8266	3.5	11.0	7.2	1.5	8294	chr3R	30396220	intergenic	not near genes	chr3R	30400367	intergenic	not near genes	chr3R	30404514	5` UTR	CR45570 +	chr3R_12_30400001	chr3R_30400001	CK1_1-HE
2944	chr3R	30480477	30480497	chr3R	30482946	30482966	jockey	4	2469	2.0	4.0	3.0	1.0	2489	chr3R	30480477	intron	PH4alphaEFB +	chr3R	30481722	intron	PH4alphaEFB +	chr3R	30482966	intron	PH4alphaEFB +	chr3R_4_30480001	chr3R_30480001	CK1_1-HE
2952	chr3R	30679544	30679552	chr3R	30687014	30687022	blood	7	7470	2.0	5.5	3.8	1.5	7478	chr3R	30679544	intergenic	not near genes	chr3R	30683283	intergenic	not near genes	chr3R	30687022	intergenic	not near genes	chr3R_7_30680001	chr3R_30680001	CK1_1-HE
2955	chr3R	30818807	30818844	chr3R	30820373	30820410	1360	28	1566	6.0	5.5	5.8	4.1	1603	chr3R	30818807	intron	cindr +	chr3R	30819608	intron	cindr +	chr3R	30820410	intron	cindr +	chr3R_28_30815001	chr3R_30815001	CK1_1-HE
2963	chr3R	31074228	31074252	chr3R	31081827	31081851	springer	5	7599	7.0	0.0	3.5	1.1	7623	chr3R	31074228	intron	Sox100B +	chr3R	31078040	intron	Sox100B +	chr3R	31081851	intron	Sox100B +	chr3R_5_31075001	chr3R_31075001	CK1_1-HE
2968	chr3R	31279371	31279409	chr3R	31285563	31285601	diver	9	6192	2.5	1.5	2.0	3.0	6230	chr3R	31279371	intergenic	not near genes	chr3R	31282486	intergenic	not near genes	chr3R	31285601	intergenic	not near genes	chr3R_9_31280001	chr3R_31280001	CK1_1-HE
2969	chr3R	31413108	31413112	chr3R	31418309	31418313	copia	4	5201	2.5	1.5	2.0	1.3	5205	chr3R	31413108	intron	Gprk2 +	chr3R	31415710	intron	Gprk2 +	chr3R	31418313	intron	Gprk2 +	chr3R_4_31415001	chr3R_31415001	CK1_1-HE
2976	chr3R	31691529	31691564	chr3R	31696296	31696331	Doc	16	4767	4.5	6.5	5.5	2.5	4802	chr3R	31691529	intergenic	not near genes	chr3R	31693930	intergenic	not near genes	chr3R	31696331	intergenic	not near genes	chr3R_16_31690001	chr3R_31690001	CK1_1-HE
2989	chr3R	31997994	31998020	chr3R	32005465	32005491	blood	15	7471	4.5	13.0	8.8	1.5	7497	chr3R	31997994	intron	heph -	chr3R	32001742	intron	heph -	chr3R	32005491	intron	heph -	chr3R_15_32000001	chr3R_32000001	CK1_1-HE
2992	chr4	76492	76516	chr4	81936	81960	I-element	12	5444	15.5	8.0	11.8	0.9	5468	chr4	76492	intron	pan +	chr4	79226	intron	pan +	chr4	81960	intron	pan +	chr4_12_75001	chr4_75001	CK1_1-HE
2997	chr4	319988	320017	chr4	328165	328194	Stalker2	5	8177	4.0	4.0	4.0	1.0	8206	chr4	319988	3` UTR	CG32850 +	chr4	324091	intron	CG32850 +	chr4	328194	3` UTR,3` UTR	CG32850 +,PMCA -	chr4_5_320001	chr4_320001	CK1_1-HE
2999	chr4	671602	671635	chr4	680186	680219	Tirant	27	8584	9.0	19.5	14.2	1.8	8617	chr4	671602	intron	CG11360 +	chr4	675910	intron	CG11360 +	chr4	680219	intron	CG11360 +	chr4_27_675001	chr4_675001	CK1_1-HE
3006	chrX	295855	295881	chrX	303476	303502	412	26	7621	11.0	10.0	10.5	2.3	7647	chrX	295855	intron	CG3777 +	chrX	299678	intron	CG3777 +	chrX	303502	intron	CG3777 +	chrX_26_295001	chrX_295001	CK1_1-HE
3007	chrX	318468	318500	chrX	323555	323587	flea	28	5087	11.5	15.0	13.2	2.0	5119	chrX	318468	intron,intron	CG3777 +,CG32816 -	chrX	321028	intron,intron	CG3777 +,CG32816 -	chrX	323587	intron,intron	CG3777 +,CG32816 -	chrX_28_320001	chrX_320001	CK1_1-HE
3009	chrX	428416	428451	chrX	434602	434637	3S18	24	6186	5.0	3.5	4.2	4.6	6221	chrX	428416	intron	CG32816 -	chrX	431526	intron	CG32816 -	chrX	434637	intron	CG32816 -	chrX_24_430001	chrX_430001	CK1_1-HE
3013	chrX	551419	551455	chrX	558982	559018	412	28	7562	7.0	6.0	6.5	3.7	7599	chrX	551419	intron	Appl +	chrX	555218	intron	Appl +	chrX	559018	intron	Appl +	chrX_28_555001	chrX_555001	CK1_1-HE
3022	chrX	812266	812298	chrX	817900	817932	297	4	5634	1.5	2.0	1.8	1.4	5666	chrX	812266	intron	CG43867 -	chrX	815099	intron	CG43867 -	chrX	817932	intron	CG43867 -	chrX_4_815001	chrX_815001	CK1_1-HE
3023	chrX	827605	827635	chrX	835398	835422	roo	5	7792	1.0	4.0	2.5	1.4	7817	chrX	827605	intron	CG43867 -	chrX	831514	intron	CG43867 -	chrX	835422	intron	CG43867 -	chrX_5_830001	chrX_830001	CK1_1-HE
3028	chrX	906704	906717	chrX	908494	908507	S-element	5	1790	3.5	7.0	5.2	0.8	1803	chrX	906704	intron	CG43867 -	chrX	907606	intron	CG43867 -	chrX	908507	intron	CG43867 -	chrX_5_905001	chrX_905001	CK1_1-HE
3036	chrX	1357776	1357808	chrX	1367947	1367979	Doc	10	10171	2.0	2.5	2.2	3.1	10203	chrX	1357776	intergenic	png -	chrX	1362878	intergenic	not near genes	chrX	1367979	intergenic	not near genes	chrX_10_1360001	chrX_1360001	CK1_1-HE
3038	chrX	1518037	1518071	chrX	1523440	1523474	jockey	5	5403	1.0	5.0	3.0	1.2	5437	chrX	1518037	intergenic	inc +	chrX	1520756	intergenic	not near genes	chrX	1523474	intergenic	not near genes	chrX_5_1520001	chrX_1520001	CK1_1-HE
3040	chrX	1627972	1628001	chrX	1635441	1635470	gtwin	37	7469	14.5	15.0	14.8	2.3	7498	chrX	1627972	intron,intron	Mur2B -,br +	chrX	1631721	intron,intron	Mur2B -,br +	chrX	1635470	intron,intron	Mur2B -,br +	chrX_37_1630001	chrX_1630001	CK1_1-HE
3045	chrX	1930548	1930558	chrX	1938120	1938130	opus	4	7572	3.5	2.0	2.8	1.1	7582	chrX	1930548	intergenic	CG11596 +	chrX	1934339	intergenic	not near genes	chrX	1938130	3` UTR	CG3857 -	chrX_4_1930001	chrX_1930001	CK1_1-HE
3047	chrX	1954887	1954918	chrX	1962828	1962859	Stalker2	11	7941	5.0	1.5	3.2	2.6	7972	chrX	1954887	intron	Hr4 +	chrX	1958873	intron	Hr4 +	chrX	1962859	intron	Hr4 +	chrX_11_1955001	chrX_1955001	CK1_1-HE
3053	chrX	2399842	2399862	chrX	2408194	2408216	roo	12	8352	7.0	0.0	3.5	2.7	8374	chrX	2399842	intergenic	not near genes	chrX	2404029	intergenic	not near genes	chrX	2408216	intergenic	not near genes	chrX_12_2400001	chrX_2400001	CK1_1-HE
3058	chrX	2664395	2664404	chrX	2665549	2665561	1360	17	1156	0.0	27.5	13.8	1.1	1166	chrX	2664395	intron	sgg +	chrX	2664978	intron	sgg +	chrX	2665561	intron	sgg +	chrX_17_2660001	chrX_2660001	CK1_1-HE
3061	chrX	2844896	2844932	chrX	2852307	2852343	mdg1	46	7411	14.0	10.5	12.2	3.5	7447	chrX	2844896	intron	kirre +	chrX	2848620	intron	kirre +	chrX	2852343	intron	kirre +	chrX_46_2845001	chrX_2845001	CK1_1-HE
3068	chrX	3058019	3058050	chrX	3058261	3058292	pogo	14	242	6.0	10.0	8.0	1.6	273	chrX	3058019	intron	kirre +	chrX	3058156	intron	kirre +	chrX	3058292	intron	kirre +	chrX_14_3055001	chrX_3055001	CK1_1-HE
3069	chrX	3075631	3075666	chrX	3080938	3080973	Transpac	14	5307	2.5	4.0	3.2	3.3	5342	chrX	3075631	intron	kirre +	chrX	3078302	intron	kirre +	chrX	3080973	intron	kirre +	chrX_14_3075001	chrX_3075001	CK1_1-HE
3086	chrX	3415018	3415050	chrX	3421204	3421236	3S18	15	6186	2.5	11.0	6.8	1.9	6218	chrX	3415018	intron,intron	CR44999 +,CG12535 -	chrX	3418127	intron,intron	CR44999 +,CG12535 -	chrX	3421236	intron,intron	CR44999 +,CG12535 -	chrX_15_3415001	chrX_3415001	CK1_1-HE
3090	chrX	3493088	3493124	chrX	3502248	3502284	roo	15	9160	3.5	3.0	3.2	3.6	9196	chrX	3493088	intron,intron	CR44999 +,Gas8 -	chrX	3497686	intron,intron	CR44999 +,Gas8 -	chrX	3502284	intron,intron	CR44999 +,Gas8 -	chrX_15_3495001	chrX_3495001	CK1_1-HE
3097	chrX	3597552	3597583	chrX	3619721	3619752	roo	21	22169	7.5	8.0	7.8	2.4	22200	chrX	3597552	intron	AstA-R1 +	chrX	3608652	intron	AstA-R1 +	chrX	3619752	intron	AstA-R1 +	chrX_21_3605001	chrX_3605001	CK1_1-HE
3107	chrX	3726757	3726797	chrX	3730155	3730195	NOF	52	3398	18.5	0.5	9.5	5.0	3438	chrX	3726757	intron	tlk +	chrX	3728476	intron	tlk +	chrX	3730195	intron	tlk +	chrX_52_3725001	chrX_3725001	CK1_1-HE
3114	chrX	3986878	3986895	chrX	3994512	3994529	412	12	7634	8.0	0.0	4.0	2.4	7651	chrX	3986878	intergenic	not near genes	chrX	3990704	intergenic	not near genes	chrX	3994529	intergenic	not near genes	chrX_12_3990001	chrX_3990001	CK1_1-HE
3120	chrX	4157889	4157925	chrX	4164925	4164961	297	31	7036	14.5	11.5	13.0	2.2	7072	chrX	4157889	intron	Fas2 -	chrX	4161425	intron	Fas2 -	chrX	4164961	intron	Fas2 -	chrX_31_4160001	chrX_4160001	CK1_1-HE
3131	chrX	4700390	4700428	chrX	4700734	4700772	jockey	25	344	4.0	3.0	3.5	5.6	382	chrX	4700390	3` UTR	ctp +	chrX	4700581	3` UTR	ctp +	chrX	4700772	3` UTR	ctp +	chrX_25_4700001	chrX_4700001	CK1_1-HE
3132	chrX	4731813	4731830	chrX	4736907	4736924	jockey	10	5094	7.5	1.5	4.5	1.8	5111	chrX	4731813	intergenic	not near genes	chrX	4734368	intergenic	not near genes	chrX	4736924	intergenic	not near genes	chrX_10_4730001	chrX_4730001	CK1_1-HE
3135	chrX	4763250	4763281	chrX	4763739	4763770	Stalker4	6	489	4.5	3.0	3.8	1.2	520	chrX	4763250	intergenic	not near genes	chrX	4763510	intergenic	not near genes	chrX	4763770	intergenic	not near genes	chrX_6_4760001	chrX_4760001	CK1_1-HE
3138	chrX	4792381	4792409	chrX	4792815	4792843	jockey	11	434	3.5	6.5	5.0	1.8	462	chrX	4792381	intergenic	not near genes	chrX	4792612	intergenic	not near genes	chrX	4792843	intergenic	not near genes	chrX_11_4790001	chrX_4790001	CK1_1-HE
3139	chrX	4827967	4828002	chrX	4835339	4835374	Stalker4	33	7372	7.5	7.5	7.5	3.9	7407	chrX	4827967	intergenic	not near genes	chrX	4831670	intergenic	not near genes	chrX	4835374	intergenic	not near genes	chrX_33_4830001	chrX_4830001	CK1_1-HE
3147	chrX	4990041	4990076	chrX	4997256	4997291	roo	24	7215	5.5	7.5	6.5	3.2	7250	chrX	4990041	intron	CR44833 -	chrX	4993666	intron	CR44833 -	chrX	4997291	intron	CR44833 -	chrX_24_4990001	chrX_4990001	CK1_1-HE
3150	chrX	5096272	5096306	chrX	5103838	5103872	springer	39	7566	13.5	8.0	10.8	3.3	7600	chrX	5096272	intron,intron	CG15465 +,rg +	chrX	5100072	intron,intron	CG15465 +,rg +	chrX	5103872	intron,intron	CG15465 +,rg +	chrX_39_5100001	chrX_5100001	CK1_1-HE
3156	chrX	5338702	5338736	chrX	5339956	5339958	jockey	26	1253	3.0	6.5	4.8	4.5	1256	chrX	5338702	intergenic	not near genes	chrX	5339330	intergenic	not near genes	chrX	5339958	intergenic	SK +	chrX_26_5335001	chrX_5335001	CK1_1-HE
3165	chrX	5481064	5481092	chrX	5485033	5485061	I-element	25	3969	0.5	0.0	0.2	20.8	3997	chrX	5481064	intron	SPR +	chrX	5483062	intron	SPR +	chrX	5485061	intron	SPR +	chrX_25_5480001	chrX_5480001	CK1_1-HE
3168	chrX	5524854	5524872	chrX	5528718	5528736	412	7	3864	0.5	2.0	1.2	3.2	3882	chrX	5524854	intergenic	snoRNA:Psi28S-3342 -	chrX	5526795	intergenic	not near genes	chrX	5528736	intergenic	Vsx2 -	chrX_7_5525001	chrX_5525001	CK1_1-HE
3181	chrX	5883808	5883837	chrX	5884050	5884079	pogo	7	242	3.0	4.0	3.5	1.6	271	chrX	5883808	intron	CR45668 -	chrX	5883944	intron	CR45668 -	chrX	5884079	intron	CR45668 -	chrX_7_5880001	chrX_5880001	CK1_1-HE
3182	chrX	5884159	5884191	chrX	5884401	5884433	pogo	7	242	4.0	4.5	4.2	1.3	274	chrX	5884159	intron	CR45668 -	chrX	5884296	intron	CR45668 -	chrX	5884433	intron	CR45668 -	chrX_7_5880001	chrX_5880001	CK1_1-HE
3184	chrX	6171587	6171612	chrX	6179019	6179044	Quasimodo	12	7432	3.5	9.5	6.5	1.6	7457	chrX	6171587	intron	Ca-alpha1T -	chrX	6175316	intron	Ca-alpha1T -	chrX	6179044	intron	Ca-alpha1T -	chrX_12_6175001	chrX_6175001	CK1_1-HE
3187	chrX	6335212	6335242	chrX	6337723	6337753	Tirant	18	2511	8.0	6.5	7.2	2.2	2541	chrX	6335212	intergenic	not near genes	chrX	6336482	intergenic	not near genes	chrX	6337753	intergenic	CG3842 +	chrX_18_6335001	chrX_6335001	CK1_1-HE
3189	chrX	6392867	6392894	chrX	6397633	6397660	Doc	12	4766	7.0	7.0	7.0	1.5	4793	chrX	6392867	intergenic	not near genes	chrX	6395264	intergenic	not near genes	chrX	6397660	intergenic	not near genes	chrX_12_6395001	chrX_6395001	CK1_1-HE
3190	chrX	6445318	6445335	chrX	6451077	6451094	297	9	5759	9.5	17.5	13.5	0.6	5776	chrX	6445318	intron	CG42340 -	chrX	6448206	intron	CG42340 -	chrX	6451094	intron	CG42340 -	chrX_9_6445001	chrX_6445001	CK1_1-HE
3193	chrX	6562815	6562851	chrX	6571298	6571334	Tirant	20	8483	4.0	8.5	6.2	2.8	8519	chrX	6562815	intron	CG34417 +	chrX	6567074	intron	CG34417 +	chrX	6571334	intron	CG34417 +	chrX_20_6565001	chrX_6565001	CK1_1-HE
3208	chrX	7023600	7023631	chrX	7030991	7031022	Tabor	13	7391	4.5	3.0	3.8	2.7	7422	chrX	7023600	intron	CG12541 -	chrX	7027311	intron	CG12541 -	chrX	7031022	intron	CG12541 -	chrX_13_7025001	chrX_7025001	CK1_1-HE
3213	chrX	7125243	7125276	chrX	7134403	7134436	roo	12	9160	6.5	0.0	3.2	2.9	9193	chrX	7125243	intergenic	not near genes	chrX	7129840	intergenic	not near genes	chrX	7134436	intergenic	not near genes	chrX_12_7125001	chrX_7125001	CK1_1-HE
3227	chrX	7702902	7702929	chrX	7703342	7703369	jockey	35	439	22.0	18.0	20.0	1.7	467	chrX	7702902	intron	CHES-1-like -	chrX	7703136	intron	CHES-1-like -	chrX	7703369	intron	CHES-1-like -	chrX_35_7700001	chrX_7700001	CK1_1-HE
3229	chrX	7784234	7784242	chrX	7784537	7784545	jockey	7	303	12.5	12.0	12.2	0.5	311	chrX	7784234	intergenic	not near genes	chrX	7784390	intergenic	not near genes	chrX	7784545	intergenic	not near genes	chrX_7_7780001	chrX_7780001	CK1_1-HE
3238	chrX	8031451	8031466	chrX	8035761	8035776	Juan	8	4310	6.5	10.0	8.2	0.9	4325	chrX	8031451	intergenic	not near genes	chrX	8033614	intergenic	not near genes	chrX	8035776	3` UTR	CG2233 -	chrX_8_8030001	chrX_8030001	CK1_1-HE
3244	chrX	8364835	8364868	chrX	8365240	8365266	BS	23	405	7.5	6.0	6.8	2.9	431	chrX	8364835	intron	nAChRalpha3 -	chrX	8365050	intron	nAChRalpha3 -	chrX	8365266	intron	nAChRalpha3 -	chrX_23_8365001	chrX_8365001	CK1_1-HE
3258	chrX	8922325	8922328	chrX	8922760	8922763	jockey	5	435	25.5	9.0	17.2	0.3	438	chrX	8922325	intron	rdgA +	chrX	8922544	intron	rdgA +	chrX	8922763	intron	rdgA +	chrX_5_8920001	chrX_8920001	CK1_1-HE
3259	chrX	8922329	8922363	chrX	8922758	8922798	jockey	45	435	9.0	8.0	8.5	4.7	469	chrX	8922329	intron	rdgA +	chrX	8922564	intron	rdgA +	chrX	8922798	intron	rdgA +	chrX_45_8920001	chrX_8920001	CK1_1-HE
3260	chrX	8927580	8927616	chrX	8929851	8929887	NOF	26	2271	6.5	4.0	5.2	4.2	2307	chrX	8927580	intron	rdgA +	chrX	8928734	intron	rdgA +	chrX	8929887	intron	rdgA +	chrX_26_8925001	chrX_8925001	CK1_1-HE
3261	chrX	8948747	8948768	chrX	8956267	8956288	roo	14	7520	0.0	4.0	2.0	4.7	7541	chrX	8948747	intron	rdgA +	chrX	8952518	intron	rdgA +	chrX	8956288	intron	rdgA +	chrX_14_8950001	chrX_8950001	CK1_1-HE
3276	chrX	9508144	9508163	chrX	9509663	9509682	jockey	15	1519	5.0	14.5	9.8	1.4	1538	chrX	9508144	intron	CG32700 -	chrX	9508913	intron	CG32700 -	chrX	9509682	intron	CG32700 -	chrX_15_9505001	chrX_9505001	CK1_1-HE
3279	chrX	9575789	9575823	chrX	9576114	9576148	mdg3	21	325	7.5	3.5	5.5	3.2	359	chrX	9575789	intron,exon	CG32699 -,CG42395 -	chrX	9575968	intron,intron	CG32699 -,CG42395 -	chrX	9576148	intron,5` UTR	CG32699 -,CG42395 -	chrX_21_9575001	chrX_9575001	CK1_1-HE
3294	chrX	10267299	10267336	chrX	10276450	10276487	roo	10	9151	3.5	5.5	4.5	1.8	9188	chrX	10267299	3` UTR	alpha-Man-I -	chrX	10271893	intron	alpha-Man-I -	chrX	10276487	3` UTR	alpha-Man-I -	chrX_10_10270001	chrX_10270001	CK1_1-HE
3307	chrX	10550852	10550887	chrX	10552320	10552355	hobo	34	1468	8.5	11.0	9.8	3.1	1503	chrX	10550852	intron	spri -	chrX	10551604	intron	spri -	chrX	10552355	intron	spri -	chrX_34_10550001	chrX_10550001	CK1_1-HE
3311	chrX	10686066	10686084	chrX	10691213	10691231	roo	18	5147	10.0	5.0	7.5	2.1	5165	chrX	10686066	intron	X11Lbeta +	chrX	10688648	intron	X11Lbeta +	chrX	10691231	intron	X11Lbeta +	chrX_18_10685001	chrX_10685001	CK1_1-HE
3315	chrX	10772686	10772695	chrX	10772758	10772779	Tirant	10	83	4.0	3.5	3.8	2.1	93	chrX	10772686	intron	CG15211 +	chrX	10772732	intron	CG15211 +	chrX	10772779	intron	CG15211 +	chrX_10_10770001	chrX_10770001	CK1_1-HE
3322	chrX	11184253	11184284	chrX	11189330	11189361	flea	9	5077	3.0	5.5	4.2	1.7	5108	chrX	11184253	intergenic	not near genes	chrX	11186807	intergenic	not near genes	chrX	11189361	intergenic	not near genes	chrX_9_11185001	chrX_11185001	CK1_1-HE
3323	chrX	11194449	11194457	chrX	11201871	11201879	gypsy5	8	7422	1.0	15.5	8.2	0.9	7430	chrX	11194449	intergenic	not near genes	chrX	11198164	intergenic	not near genes	chrX	11201879	intergenic	CG11106 +	chrX_8_11195001	chrX_11195001	CK1_1-HE
3324	chrX	11194458	11194461	chrX	11201864	11201883	gypsy5	8	7420	1.0	12.5	6.8	1.0	7425	chrX	11194458	intergenic	not near genes	chrX	11198170	intergenic	not near genes	chrX	11201883	intergenic	CG11106 +	chrX_8_11195001	chrX_11195001	CK1_1-HE
3328	chrX	11268559	11268590	chrX	11270053	11270060	hopper2	16	1492	13.0	0.0	6.5	2.1	1501	chrX	11268559	intron	CG44422 -	chrX	11269310	intron	CG44422 -	chrX	11270060	intron	CG44422 -	chrX_16_11265001	chrX_11265001	CK1_1-HE
3332	chrX	11312061	11312091	chrX	11319415	11319444	Stalker2	7	7353	0.5	6.5	3.5	1.6	7383	chrX	11312061	intergenic	not near genes	chrX	11315752	intergenic	not near genes	chrX	11319444	intergenic	not near genes	chrX_7_11315001	chrX_11315001	CK1_1-HE
3336	chrX	11633425	11633427	chrX	11640469	11640471	297	4	7044	14.0	4.0	9.0	0.4	7046	chrX	11633425	intron	Ptp10D +	chrX	11636948	intron	Ptp10D +	chrX	11640471	intron	Ptp10D +	chrX_4_11635001	chrX_11635001	CK1_1-HE
3337	chrX	11645106	11645140	chrX	11648276	11648311	NOF	18	3171	11.5	8.0	9.8	1.7	3205	chrX	11645106	intron	Ptp10D +	chrX	11646708	intron	Ptp10D +	chrX	11648311	intron	Ptp10D +	chrX_18_11645001	chrX_11645001	CK1_1-HE
3345	chrX	12168131	12168166	chrX	12173574	12173609	I-element	12	5443	9.0	8.5	8.8	1.2	5478	chrX	12168131	intron	Ten-a +	chrX	12170870	intron	Ten-a +	chrX	12173609	intron	Ten-a +	chrX_12_12170001	chrX_12170001	CK1_1-HE
3352	chrX	12301954	12301982	chrX	12303261	12303289	X-element	8	1307	2.0	3.0	2.5	2.3	1335	chrX	12301954	intron	Ten-a +	chrX	12302622	intron	Ten-a +	chrX	12303289	intron	Ten-a +	chrX_8_12300001	chrX_12300001	CK1_1-HE
3376	chrX	12930595	12930610	chrX	12937712	12937727	HMS-Beagle	10	7116	4.5	14.0	9.2	1.0	7132	chrX	12930595	intron	fne +	chrX	12934161	intron	fne +	chrX	12937727	intron	fne +	chrX_10_12930001	chrX_12930001	CK1_1-HE
3392	chrX	13401483	13401522	chrX	13401836	13401874	jockey	6	353	3.5	3.0	3.2	1.4	391	chrX	13401483	intergenic	CG1673 +,CG12725 -	chrX	13401678	intergenic	CG12725 -,CG1673 +	chrX	13401874	3` UTR	CG12725 -	chrX_6_13400001	chrX_13400001	CK1_1-HE
3393	chrX	13403019	13403043	chrX	13403147	13403171	X-element	11	128	2.5	3.5	3.0	2.8	152	chrX	13403019	intergenic	CG12725 -	chrX	13403095	intergenic	CG12725 -	chrX	13403171	intergenic	CG12725 -	chrX_11_13400001	chrX_13400001	CK1_1-HE
3395	chrX	13429466	13429493	chrX	13430616	13430643	jockey	12	1150	2.0	4.5	3.2	2.9	1177	chrX	13429466	intergenic	not near genes	chrX	13430054	intergenic	not near genes	chrX	13430643	intergenic	not near genes	chrX_12_13430001	chrX_13430001	CK1_1-HE
3397	chrX	13463642	13463675	chrX	13469220	13469253	mdg3	13	5578	5.5	4.0	4.8	2.2	5611	chrX	13463642	intron	Neto +	chrX	13466448	intron	Neto +	chrX	13469253	intron	Neto +	chrX_13_13465001	chrX_13465001	CK1_1-HE
3413	chrX	13937973	13938001	chrX	13941245	13941273	I-element	8	3272	8.0	4.5	6.2	1.1	3300	chrX	13937973	intron	mamo -	chrX	13939623	intron	mamo -	chrX	13941273	intron	mamo -	chrX_8_13935001	chrX_13935001	CK1_1-HE
3416	chrX	14030776	14030784	chrX	14035364	14035372	copia	5	4588	0.0	11.5	5.8	0.7	4596	chrX	14030776	intergenic	not near genes	chrX	14033074	intergenic	not near genes	chrX	14035372	intergenic	not near genes	chrX_5_14030001	chrX_14030001	CK1_1-HE
3417	chrX	14105020	14105053	chrX	14114172	14114204	roo	15	9152	4.5	7.5	6.0	2.1	9184	chrX	14105020	intergenic	not near genes	chrX	14109612	intergenic	not near genes	chrX	14114204	5` UTR	CR44657 +	chrX_15_14105001	chrX_14105001	CK1_1-HE
3419	chrX	14157592	14157611	chrX	14163250	14163269	297	6	5658	6.5	4.0	5.2	1.0	5677	chrX	14157592	intergenic	not near genes	chrX	14160430	intergenic	not near genes	chrX	14163269	intergenic	not near genes	chrX_6_14160001	chrX_14160001	CK1_1-HE
3426	chrX	14416304	14416341	chrX	14421073	14421109	F-element	19	4769	6.5	5.0	5.8	2.8	4805	chrX	14416304	intron	dpr8 +	chrX	14418706	intron	dpr8 +	chrX	14421109	intron	dpr8 +	chrX_19_14415001	chrX_14415001	CK1_1-HE
3434	chrX	14589685	14589706	chrX	14589927	14589948	pogo	14	242	4.5	2.0	3.2	3.3	263	chrX	14589685	intron	CG9413 -	chrX	14589816	intron	CG9413 -	chrX	14589948	intron	CG9413 -	chrX_14_14585001	chrX_14585001	CK1_1-HE
3438	chrX	14636460	14636493	chrX	14641902	14641935	I-element	29	5442	10.0	5.0	7.5	3.4	5475	chrX	14636460	intron	NetA -	chrX	14639198	intron	NetA -	chrX	14641935	intron	NetA -	chrX_29_14635001	chrX_14635001	CK1_1-HE
3442	chrX	14778024	14778059	chrX	14782822	14782857	Doc	11	4798	1.5	4.0	2.8	2.9	4833	chrX	14778024	intergenic	CG5347 +	chrX	14780440	intergenic	not near genes	chrX	14782857	intergenic	Ag5r2 -	chrX_11_14780001	chrX_14780001	CK1_1-HE
3443	chrX	14818761	14818798	chrX	14823966	14824003	copia	19	5203	6.0	4.0	5.0	3.2	5242	chrX	14818761	intron	rut -	chrX	14821382	intron	rut -	chrX	14824003	intron	rut -	chrX_19_14820001	chrX_14820001	CK1_1-HE
3448	chrX	14936844	14936875	chrX	14946116	14946133	roo	4	9262	0.0	0.0	0.0	4.0	9289	chrX	14936844	intron	pdgy -	chrX	14941488	intron	pdgy -	chrX	14946133	intron	pdgy -	chrX_4_14940001	chrX_14940001	CK1_1-HE
3464	chrX	15273703	15273738	chrX	15274871	15274906	1360	21	1168	8.0	13.0	10.5	1.8	1203	chrX	15273703	intergenic	not near genes	chrX	15274304	intergenic	not near genes	chrX	15274906	intergenic	not near genes	chrX_21_15270001	chrX_15270001	CK1_1-HE
3467	chrX	15413047	15413083	chrX	15417350	15417386	Juan	48	4303	14.5	15.0	14.8	3.0	4339	chrX	15413047	intron	Cngl -	chrX	15415216	intron	Cngl -	chrX	15417386	intron	Cngl -	chrX_48_15415001	chrX_15415001	CK1_1-HE
3468	chrX	15421918	15421952	chrX	15423430	15423464	pogo	30	1512	8.0	12.5	10.2	2.7	1546	chrX	15421918	intron	Cngl -	chrX	15422691	intron	Cngl -	chrX	15423464	intron	Cngl -	chrX_30_15420001	chrX_15420001	CK1_1-HE
3469	chrX	15435687	15435692	chrX	15436121	15436126	rover	9	434	0.0	31.5	15.8	0.5	439	chrX	15435687	intron	Cngl -	chrX	15435906	intron	Cngl -	chrX	15436126	intron	Cngl -	chrX_9_15435001	chrX_15435001	CK1_1-HE
3470	chrX	15435693	15435705	chrX	15436114	15436139	rover	20	433	0.0	29.5	14.8	1.3	446	chrX	15435693	intron	Cngl -	chrX	15435916	intron	Cngl -	chrX	15436139	intron	Cngl -	chrX_20_15435001	chrX_15435001	CK1_1-HE
3492	chrX	16222783	16222790	chrX	16231134	16231141	roo	4	8351	1.5	4.5	3.0	1.0	8358	chrX	16222783	intergenic	not near genes	chrX	16226962	intergenic	not near genes	chrX	16231141	intergenic	not near genes	chrX_4_16225001	chrX_16225001	CK1_1-HE
3493	chrX	16340693	16340696	chrX	16349851	16349854	roo	4	9158	0.0	5.0	2.5	1.1	9161	chrX	16340693	intergenic	Dsp1 +	chrX	16345274	intergenic	not near genes	chrX	16349854	intergenic	sl +	chrX_4_16345001	chrX_16345001	CK1_1-HE
3497	chrX	16492643	16492679	chrX	16498221	16498257	mdg3	24	5578	6.5	10.5	8.5	2.5	5614	chrX	16492643	intron	para -	chrX	16495450	intron	para -	chrX	16498257	intron	para -	chrX_24_16495001	chrX_16495001	CK1_1-HE
3513	chrX	17057933	17057963	chrX	17058175	17058205	pogo	8	242	0.0	4.0	2.0	2.7	272	chrX	17057933	intron	CG45002 -	chrX	17058069	intron	CG45002 -	chrX	17058205	intron	CG45002 -	chrX_8_17055001	chrX_17055001	CK1_1-HE
3520	chrX	17195210	17195235	chrX	17200296	17200321	flea	7	5086	1.5	2.0	1.8	2.5	5111	chrX	17195210	3` UTR	baz +	chrX	17197766	3` UTR	baz +	chrX	17200321	3` UTR	baz +	chrX_7_17195001	chrX_17195001	CK1_1-HE
3534	chrX	17556942	17556958	chrX	17557442	17557458	mdg1	9	500	6.0	6.0	6.0	1.3	516	chrX	17556942	intron	CG43658 -	chrX	17557200	intron	CG43658 -	chrX	17557458	intron	CG43658 -	chrX_9_17555001	chrX_17555001	CK1_1-HE
3543	chrX	17792967	17792984	chrX	17796265	17796282	flea	14	3298	7.0	12.5	9.8	1.3	3315	chrX	17792967	intron	OdsH +	chrX	17794624	intron	OdsH +	chrX	17796282	intron	OdsH +	chrX_14_17790001	chrX_17790001	CK1_1-HE
3555	chrX	18194064	18194104	chrX	18194600	18194640	BS	26	536	8.5	8.0	8.2	2.8	576	chrX	18194064	intron	Frq2 +	chrX	18194352	intron	Frq2 +	chrX	18194640	intron	Frq2 +	chrX_26_18190001	chrX_18190001	CK1_1-HE
3563	chrX	18429494	18429527	chrX	18434806	18434839	Transpac	8	5312	2.0	2.5	2.2	2.5	5345	chrX	18429494	intergenic	not near genes	chrX	18432166	intergenic	not near genes	chrX	18434839	intergenic	not near genes	chrX_8_18430001	chrX_18430001	CK1_1-HE
3569	chrX	18555375	18555412	chrX	18556898	18556935	transib2	19	1523	4.0	4.5	4.2	3.7	1560	chrX	18555375	intron	Bx +	chrX	18556155	intron	Bx +	chrX	18556935	intron	Bx +	chrX_19_18555001	chrX_18555001	CK1_1-HE
3574	chrX	18754332	18754344	chrX	18758000	18758012	297	4	3668	5.5	3.0	4.2	0.8	3680	chrX	18754332	intergenic	not near genes	chrX	18756172	intergenic	not near genes	chrX	18758012	intergenic	not near genes	chrX_4_18755001	chrX_18755001	CK1_1-HE
3583	chrX	18957069	18957101	chrX	18965732	18965765	roo	13	8664	0.5	4.5	2.5	3.7	8696	chrX	18957069	intron	CG43759 +	chrX	18961417	intron	CG43759 +	chrX	18965765	intron	CG43759 +	chrX_13_18960001	chrX_18960001	CK1_1-HE
3588	chrX	19060402	19060438	chrX	19065187	19065223	Doc	14	4785	3.0	8.5	5.8	2.1	4821	chrX	19060402	intron	CG14190 +	chrX	19062812	intron	CG14190 +	chrX	19065223	intron	CG14190 +	chrX_14_19060001	chrX_19060001	CK1_1-HE
3595	chrX	19136555	19136584	chrX	19143475	19143504	412	12	6920	2.0	3.0	2.5	3.4	6949	chrX	19136555	intergenic	not near genes	chrX	19140030	intergenic	not near genes	chrX	19143504	3` UTR	RhoGAP18B -	chrX_12_19140001	chrX_19140001	CK1_1-HE
3604	chrX	19356985	19357014	chrX	19358427	19358456	NOF	20	1442	11.0	0.0	5.5	3.1	1471	chrX	19356985	intron	kek5 +	chrX	19357720	intron	kek5 +	chrX	19358456	intron	kek5 +	chrX_20_19355001	chrX_19355001	CK1_1-HE
3605	chrX	19380167	19380188	chrX	19380410	19380431	pogo	15	243	9.0	12.5	10.8	1.3	264	chrX	19380167	intron	kek5 +	chrX	19380299	intron	kek5 +	chrX	19380431	intron	kek5 +	chrX_15_19380001	chrX_19380001	CK1_1-HE
3609	chrX	19472126	19472153	chrX	19472697	19472724	jockey	5	570	1.5	1.5	1.5	2.0	598	chrX	19472126	intergenic	kek5 +	chrX	19472425	intergenic	not near genes	chrX	19472724	intergenic	not near genes	chrX_5_19470001	chrX_19470001	CK1_1-HE
3616	chrX	19710071	19710103	chrX	19711858	19711890	S-element	15	1787	2.5	3.5	3.0	3.8	1819	chrX	19710071	intron	meso18E -	chrX	19710980	intron	meso18E -	chrX	19711890	intron	meso18E -	chrX_15_19710001	chrX_19710001	CK1_1-HE
3623	chrX	19812748	19812758	chrX	19816037	19816047	Gypsy12A_LTR	10	3289	68.0	38.5	53.2	0.2	3299	chrX	19812748	5` UTR	skpD +	chrX	19814398	intergenic	not near genes	chrX	19816047	intergenic	skpC +	chrX_10_19810001	chrX_19810001	CK1_1-HE
3625	chrX	19821495	19821734	chrX	19821598	19821820	TAHRE	5	93	7.5	4.5	6.0	0.7	325	chrX	19821495	intergenic	not near genes	chrX	19821658	intergenic	not near genes	chrX	19821820	intergenic	not near genes	chrX_5_19820001	chrX_19820001	CK1_1-HE
3647	chrX	20377330	20377350	chrX	20378798	20378818	hobo	5	1468	5.5	1.5	3.5	1.1	1488	chrX	20377330	intergenic	not near genes	chrX	20378074	intergenic	not near genes	chrX	20378818	intergenic	not near genes	chrX_5_20375001	chrX_20375001	CK1_1-HE
3654	chrX	20504125	20504154	chrX	20505647	20505676	transib2	12	1522	5.5	3.5	4.5	2.2	1551	chrX	20504125	intron	RhoGAP19D -	chrX	20504900	intron	RhoGAP19D -	chrX	20505676	intron	RhoGAP19D -	chrX_12_20500001	chrX_20500001	CK1_1-HE
3666	chrX	20836725	20836751	chrX	20844328	20844354	roo	13	7603	0.0	0.0	0.0	13.0	7629	chrX	20836725	intron	shakB -	chrX	20840540	intron	shakB -	chrX	20844354	intron	shakB -	chrX_13_20840001	chrX_20840001	CK1_1-HE
3672	chrX	20940716	20940756	chrX	20942186	20942226	hobo	24	1470	3.0	4.5	3.8	5.0	1510	chrX	20940716	intergenic	not near genes	chrX	20941471	intergenic	not near genes	chrX	20942226	intergenic	not near genes	chrX_24_20940001	chrX_20940001	CK1_1-HE
3673	chrX	20956988	20957009	chrX	20962431	20962452	I-element	7	5443	1.5	3.0	2.2	2.2	5464	chrX	20956988	intergenic	not near genes	chrX	20959720	intergenic	not near genes	chrX	20962452	intergenic	Ser6 -	chrX_7_20955001	chrX_20955001	CK1_1-HE
3680	chrX	21061871	21061895	chrX	21062356	21062380	roo	12	486	2.5	1.5	2.0	4.0	509	chrX	21061871	intron	bves +	chrX	21062126	intron	bves +	chrX	21062380	intron,3` UTR	bves +,CG32512 -	chrX_12_21060001	chrX_21060001	CK1_1-HE
3698	chrX	21458691	21458727	chrX	21464128	21464164	Ivk	23	5437	0.0	5.5	2.8	6.1	5473	chrX	21458691	intergenic	not near genes	chrX	21461428	intergenic	not near genes	chrX	21464164	intergenic	not near genes	chrX_23_21460001	chrX_21460001	CK1_1-HE
3700	chrX	21474405	21474432	chrX	21474772	21474799	1731	14	367	4.0	4.0	4.0	2.8	394	chrX	21474405	intergenic	not near genes	chrX	21474602	intergenic	not near genes	chrX	21474799	intergenic	not near genes	chrX_14_21470001	chrX_21470001	CK1_1-HE
3702	chrX	21555661	21555689	chrX	21555923	21555951	Copia1_DM	9	262	2.0	7.0	4.5	1.6	290	chrX	21555661	intergenic	not near genes	chrX	21555806	intergenic	not near genes	chrX	21555951	intergenic	not near genes	chrX_9_21555001	chrX_21555001	CK1_1-HE
3709	chrX	22522630	22522652	chrX	22525451	22525473	NOF	7	2821	3.5	3.5	3.5	1.6	2843	chrX	22522630	intron	CG17600 +	chrX	22524052	intron	CG17600 +	chrX	22525473	intron	CG17600 +	chrX_7_22520001	chrX_22520001	CK1_1-HE
3720	chrX	22681480	22681514	chrX	22688939	22688973	HMS-Beagle2	17	7459	11.5	10.5	11.0	1.4	7493	chrX	22681480	intron	CR44997 +	chrX	22685226	intron	CR44997 +	chrX	22688973	intron	CR44997 +	chrX_17_22685001	chrX_22685001	CK1_1-HE
3722	chrX	22697496	22697522	chrX	22701794	22701820	Juan	14	4298	9.5	12.5	11.0	1.2	4324	chrX	22697496	intron	CR44997 +	chrX	22699658	intron	CR44997 +	chrX	22701820	intron	CR44997 +	chrX_14_22695001	chrX_22695001	CK1_1-HE
3723	chrX	22771504	22771530	chrX	22774796	22774822	297	7	3292	3.0	8.0	5.5	1.1	3318	chrX	22771504	intron	CR44997 +	chrX	22773163	intron	CR44997 +	chrX	22774822	intron	CR44997 +	chrX_7_22770001	chrX_22770001	CK1_1-HE
3726	chrX	22837842	22837873	chrX	22839427	22839458	INE-1	10	1585	2.5	5.0	3.8	2.1	1616	chrX	22837842	intron,intron	fog -,CG42346 +	chrX	22838650	intron,intron	fog -,CG42346 +	chrX	22839458	intron,intron	fog -,CG42346 +	chrX_10_22835001	chrX_22835001	CK1_1-HE
3732	chrX	22908989	22908995	chrX	22913215	22913221	Burdock	4	4226	4.5	10.0	7.2	0.5	4232	chrX	22908989	intergenic	not near genes	chrX	22911105	intergenic	not near genes	chrX	22913221	intergenic	not near genes	chrX_4_22910001	chrX_22910001	CK1_1-HE
3735	chrX	22987109	22987134	chrX	22989769	22989794	Burdock	5	2660	2.5	0.5	1.5	2.0	2685	chrX	22987109	intron,intron	stnA -,stnB -	chrX	22988452	intron,intron	stnA -,stnB -	chrX	22989794	intron,intron	stnA -,stnB -	chrX_5_22985001	chrX_22985001	CK1_1-HE
3737	chrX	22996313	22996331	chrX	23003547	23003565	roo	10	7234	1.5	5.0	3.2	2.4	7252	chrX	22996313	intron,intron	stnA -,stnB -	chrX	22999939	intron,intron	stnA -,stnB -	chrX	23003565	intron,intron	stnA -,stnB -	chrX_10_22995001	chrX_22995001	CK1_1-HE
3738	chrX	23036380	23036413	chrX	23037782	23037815	pogo	17	1402	1.5	2.5	2.0	5.7	1435	chrX	23036380	intron	CG12061 +	chrX	23037098	intron	CG12061 +	chrX	23037815	intron	CG12061 +	chrX_17_23035001	chrX_23035001	CK1_1-HE