SV#	Chr_5p	Chr_coord_5p_start	Chr_coord_5p_end	Chr_3p	Chr_coord_3p_start	Chr_coord_3p_end	repName	Reads_collapsed	avg_del_len	RefGen_3prime	Refgen_5prime	RefGen_Avg	Coverage_Ratio	size	Chr_5p	Chr_coord_5p	classification_5p	comment_5p	Chr_mid	Chr_coord_mid	classification_mid	comment_mid	Chr_3p	Chr_coord_3p	classification_3p	comment_3p	depletion_code	loci_code	libname
2	chr2L	47457	47491	chr2L	52563	52597	jockey	25	5106	12.0	13.0	12.5	1.9	5140	chr2L	47457	intron	Cda5 -	chr2L	50027	intron	Cda5 -	chr2L	52597	intron	Cda5 -	chr2L_25_50001	chr2L_50001	W2
3	chr2L	45955	45990	chr2L	53388	53423	jockey	20	7433	37.5	29.5	33.5	0.6	7468	chr2L	45955	intron	Cda5 -	chr2L	49689	intron	Cda5 -	chr2L	53423	intron	Cda5 -	chr2L_20_45001	chr2L_45001	W2
6	chr2L	347885	347913	chr2L	355386	355414	blood	11	7501	6.5	8.0	7.2	1.3	7529	chr2L	347885	3` UTR	Plc21C +	chr2L	351650	intron	Plc21C +	chr2L	355414	3` UTR	Plc21C +	chr2L_11_350001	chr2L_350001	W2
9	chr2L	686923	686944	chr2L	695958	695985	roo	7	9040	2.0	2.5	2.2	2.2	9062	chr2L	686923	intron	ds -	chr2L	691454	intron	ds -	chr2L	695985	intron	ds -	chr2L_7_690001	chr2L_690001	W2
12	chr2L	770462	770489	chr2L	772244	772271	Bari1	14	1782	5.0	2.5	3.8	2.9	1809	chr2L	770462	intergenic	not near genes	chr2L	771366	intergenic	not near genes	chr2L	772271	intergenic	CR44614 +	chr2L_14_770001	chr2L_770001	W2
18	chr2L	976883	976909	chr2L	984514	984546	roo	14	7637	1.0	1.5	1.2	6.4	7663	chr2L	976883	intergenic	not near genes	chr2L	980714	intergenic	not near genes	chr2L	984546	intergenic	not near genes	chr2L_14_980001	chr2L_980001	W2
19	chr2L	996727	996754	chr2L	1005823	1005850	roo	10	9096	2.0	5.5	3.8	2.1	9123	chr2L	996727	intergenic	not near genes	chr2L	1001288	intergenic	not near genes	chr2L	1005850	intergenic	not near genes	chr2L_10_1000001	chr2L_1000001	W2
26	chr2L	1220129	1220157	chr2L	1227596	1227624	blood	15	7467	10.5	6.0	8.2	1.6	7495	chr2L	1220129	intron	CG42329 +	chr2L	1223876	intron	CG42329 +	chr2L	1227624	intron	CG42329 +	chr2L_15_1220001	chr2L_1220001	W2
34	chr2L	1570694	1570717	chr2L	1573567	1573590	F-element	9	2873	5.5	7.0	6.2	1.2	2896	chr2L	1570694	intron	haf +	chr2L	1572142	intron	haf +	chr2L	1573590	intron	haf +	chr2L_9_1570001	chr2L_1570001	W2
36	chr2L	1678996	1679008	chr2L	1686462	1686474	blood	5	7466	0.5	11.5	6.0	0.7	7478	chr2L	1678996	intron	chinmo +	chr2L	1682735	intron	chinmo +	chr2L	1686474	intron	chinmo +	chr2L_5_1680001	chr2L_1680001	W2
37	chr2L	1711353	1711387	chr2L	1711678	1711712	mdg3	20	325	16.0	11.0	13.5	1.4	359	chr2L	1711353	3` UTR,3` UTR	mRpL48 +,frtz -	chr2L	1711532	3` UTR	frtz -	chr2L	1711712	3` UTR	frtz -	chr2L_20_1710001	chr2L_1710001	W2
44	chr2L	2100375	2100408	chr2L	2109527	2109550	roo	13	9151	7.5	7.0	7.2	1.6	9175	chr2L	2100375	intron	dpr3 -	chr2L	2104962	intron	dpr3 -	chr2L	2109550	intron	dpr3 -	chr2L_13_2100001	chr2L_2100001	W2
45	chr2L	2112110	2112144	chr2L	2119773	2119807	opus	12	7661	6.0	6.0	6.0	1.7	7697	chr2L	2112110	intergenic	not near genes	chr2L	2115958	intergenic	not near genes	chr2L	2119807	intergenic	not near genes	chr2L_12_2115001	chr2L_2115001	W2
49	chr2L	2294039	2294075	chr2L	2299245	2299281	copia	16	5206	3.0	4.5	3.8	3.3	5242	chr2L	2294039	intergenic	not near genes	chr2L	2296660	intergenic	not near genes	chr2L	2299281	intergenic	not near genes	chr2L_16_2295001	chr2L_2295001	W2
55	chr2L	2565538	2565569	chr2L	2571607	2571638	297	8	6068	2.0	9.0	5.5	1.2	6100	chr2L	2565538	exon	Cyp309a2 -	chr2L	2568588	intron	Cyp309a2 -	chr2L	2571638	intron	Cyp309a2 -	chr2L_8_2565001	chr2L_2565001	W2
60	chr2L	2661194	2661230	chr2L	2663033	2663069	I-element	11	1839	2.5	4.5	3.5	2.4	1875	chr2L	2661194	intergenic	not near genes	chr2L	2662132	intergenic	not near genes	chr2L	2663069	intergenic	not near genes	chr2L_11_2660001	chr2L_2660001	W2
62	chr2L	2772612	2772627	chr2L	2779195	2779210	297	8	6583	8.5	7.5	8.0	0.9	6598	chr2L	2772612	3` UTR	Syt1 -	chr2L	2775911	intron	Syt1 -	chr2L	2779210	3` UTR	Syt1 -	chr2L_8_2775001	chr2L_2775001	W2
68	chr2L	3073031	3073065	chr2L	3078235	3078269	copia	14	5204	3.0	8.0	5.5	2.2	5238	chr2L	3073031	intron	toc -	chr2L	3075650	intron	toc -	chr2L	3078269	intron	toc -	chr2L_14_3075001	chr2L_3075001	W2
74	chr2L	3202742	3202767	chr2L	3210172	3210197	mdg1	14	7430	4.5	7.0	5.8	2.1	7455	chr2L	3202742	intergenic	not near genes	chr2L	3206470	intergenic	not near genes	chr2L	3210197	intergenic	CR45336 +	chr2L_14_3205001	chr2L_3205001	W2
76	chr2L	3251496	3251525	chr2L	3259062	3259091	springer	10	7566	4.0	4.0	4.0	2.0	7595	chr2L	3251496	intergenic	not near genes	chr2L	3255294	intergenic	not near genes	chr2L	3259091	intergenic	not near genes	chr2L_10_3255001	chr2L_3255001	W2
87	chr2L	3649786	3649820	chr2L	3654990	3655024	copia	16	5204	2.5	6.0	4.2	3.1	5238	chr2L	3649786	intron	for -	chr2L	3652405	intron	for -	chr2L	3655024	intron	for -	chr2L_16_3650001	chr2L_3650001	W2
96	chr2L	4066043	4066061	chr2L	4068869	4068887	Juan	7	2826	5.0	7.5	6.2	1.0	2844	chr2L	4066043	intron	ed +	chr2L	4067465	intron	ed +	chr2L	4068887	intron	ed +	chr2L_7_4065001	chr2L_4065001	W2
103	chr2L	4181297	4181305	chr2L	4183919	4183938	Burdock	5	2628	3.0	7.5	5.2	0.8	2641	chr2L	4181297	intergenic	not near genes	chr2L	4182618	intergenic	not near genes	chr2L	4183938	intergenic	not near genes	chr2L_5_4180001	chr2L_4180001	W2
111	chr2L	4601720	4601737	chr2L	4609162	4609179	mdg1	7	7442	13.5	11.0	12.2	0.5	7459	chr2L	4601720	intron	dp -	chr2L	4605450	intron	dp -	chr2L	4609179	intron	dp -	chr2L_7_4605001	chr2L_4605001	W2
112	chr2L	4661843	4661858	chr2L	4669424	4669439	opus	4	7581	1.0	5.5	3.2	1.0	7596	chr2L	4661843	intergenic	not near genes	chr2L	4665641	intergenic	not near genes	chr2L	4669439	intergenic	not near genes	chr2L_4_4665001	chr2L_4665001	W2
115	chr2L	4918165	4918198	chr2L	4923239	4923272	jockey	12	5074	4.5	6.0	5.2	1.9	5107	chr2L	4918165	intron	hoe1 -	chr2L	4920718	intron	hoe1 -	chr2L	4923272	intron	hoe1 -	chr2L_12_4920001	chr2L_4920001	W2
117	chr2L	5827709	5827740	chr2L	5836718	5836749	roo	12	9009	11.5	14.5	13.0	0.9	9040	chr2L	5827709	intron	TrissinR +	chr2L	5832229	intron	TrissinR +	chr2L	5836749	intron	TrissinR +	chr2L_12_5830001	chr2L_5830001	W2
134	chr2L	6279643	6279651	chr2L	6279723	6279731	INE-1	5	80	9.5	1.5	5.5	0.8	88	chr2L	6279643	intron	Ddr +	chr2L	6279687	intron	Ddr +	chr2L	6279731	intron	Ddr +	chr2L_5_6275001	chr2L_6275001	W2
140	chr2L	6363153	6363182	chr2L	6366080	6366109	Burdock	18	2927	6.5	7.0	6.8	2.3	2956	chr2L	6363153	intergenic	not near genes	chr2L	6364631	intergenic	not near genes	chr2L	6366109	intergenic	not near genes	chr2L_18_6360001	chr2L_6360001	W2
142	chr2L	6426855	6426884	chr2L	6445116	6445145	roo	21	18261	6.0	7.5	6.8	2.7	18290	chr2L	6426855	3` UTR	CG9527 -	chr2L	6436000	intron	CG9527 -	chr2L	6445145	exon	CG9527 -	chr2L_21_6435001	chr2L_6435001	W2
153	chr2L	6876773	6876810	chr2L	6882965	6883002	diver	23	6191	4.5	2.0	3.2	5.5	6229	chr2L	6876773	intron	Nlg2 +	chr2L	6879888	intron	Nlg2 +	chr2L	6883002	intron	Nlg2 +	chr2L_23_6875001	chr2L_6875001	W2
166	chr2L	7343322	7343352	chr2L	7350439	7350469	roo	11	7115	6.5	5.5	6.0	1.6	7147	chr2L	7343322	intron	Wnt6 +	chr2L	7346896	intron	Wnt6 +	chr2L	7350469	intron	Wnt6 +	chr2L_11_7345001	chr2L_7345001	W2
180	chr2L	7959043	7959064	chr2L	7960455	7960465	pogo	14	1411	4.5	2.5	3.5	3.1	1422	chr2L	7959043	intron	Snoo -	chr2L	7959754	intron	Snoo -	chr2L	7960465	intron	Snoo -	chr2L_14_7955001	chr2L_7955001	W2
181	chr2L	7977089	7977111	chr2L	7984066	7984088	297	8	6977	7.0	8.5	7.8	0.9	6999	chr2L	7977089	intron	Snoo -	chr2L	7980588	intron	Snoo -	chr2L	7984088	intron,5` UTR	Snoo -,CG7231 +	chr2L_8_7980001	chr2L_7980001	W2
184	chr2L	8013613	8013633	chr2L	8018818	8018838	copia	8	5204	6.0	0.0	3.0	2.0	5225	chr2L	8013613	intron	Tg +	chr2L	8016226	intron	Tg +	chr2L	8018838	intron	Tg +	chr2L_8_8015001	chr2L_8015001	W2
185	chr2L	8018822	8018836	chr2L	8023607	8023621	Doc	11	4785	0.0	3.5	1.8	3.9	4799	chr2L	8018822	intron	Tg +	chr2L	8021222	intron	Tg +	chr2L	8023621	intron	Tg +	chr2L_11_8020001	chr2L_8020001	W2
194	chr2L	8452417	8452449	chr2L	8461589	8461621	roo	18	9172	3.0	4.5	3.8	3.8	9204	chr2L	8452417	intron	fu12 -	chr2L	8457019	intron	fu12 -	chr2L	8461621	intron	fu12 -	chr2L_18_8455001	chr2L_8455001	W2
200	chr2L	8594467	8594497	chr2L	8601522	8601546	297	14	7055	3.5	2.0	2.8	3.7	7079	chr2L	8594467	intron,3` UTR	Sema-1a +,CR43855 -	chr2L	8598006	intron	Sema-1a +	chr2L	8601546	intron	Sema-1a +	chr2L_14_8595001	chr2L_8595001	W2
203	chr2L	8723112	8723147	chr2L	8731490	8731525	Tirant	16	8378	4.0	5.5	4.8	2.8	8413	chr2L	8723112	intron	raw -	chr2L	8727318	intron	raw -	chr2L	8731525	intron	raw -	chr2L_16_8725001	chr2L_8725001	W2
211	chr2L	9000276	9000312	chr2L	9007787	9007823	roo	7	7511	5.0	4.5	4.8	1.2	7547	chr2L	9000276	intergenic	Try29F +	chr2L	9004050	intergenic	not near genes	chr2L	9007823	intergenic	not near genes	chr2L_7_9000001	chr2L_9000001	W2
219	chr2L	9217965	9218001	chr2L	9222753	9222789	Doc	6	4788	3.5	0.0	1.8	2.1	4824	chr2L	9217965	intron	tai +	chr2L	9220377	intron	tai +	chr2L	9222789	intron	tai +	chr2L_6_9220001	chr2L_9220001	W2
229	chr2L	9393497	9393531	chr2L	9396465	9396499	jockey	8	2968	1.5	5.0	3.2	1.9	3002	chr2L	9393497	intron	Shawl -	chr2L	9394998	intron	Shawl -	chr2L	9396499	intron	Shawl -	chr2L_8_9390001	chr2L_9390001	W2
247	chr2L	9973728	9973756	chr2L	9980848	9980876	HMS-Beagle	17	7120	7.5	6.0	6.8	2.2	7148	chr2L	9973728	intergenic	not near genes	chr2L	9977302	intergenic	not near genes	chr2L	9980876	intergenic	not near genes	chr2L_17_9975001	chr2L_9975001	W2
250	chr2L	10156236	10156273	chr2L	10164087	10164124	blood	18	7851	2.0	2.5	2.2	5.6	7888	chr2L	10156236	intron,3` UTR	CG44153 -,CG4839 +	chr2L	10160180	intron	CG44153 -	chr2L	10164124	intron	CG44153 -	chr2L_18_10160001	chr2L_10160001	W2
264	chr2L	10592852	10592873	chr2L	10600515	10600536	opus	5	7663	1.5	7.5	4.5	0.9	7684	chr2L	10592852	intron	Trim9 +	chr2L	10596694	intron	Trim9 +	chr2L	10600536	intron	Trim9 +	chr2L_5_10595001	chr2L_10595001	W2
271	chr2L	10862842	10862868	chr2L	10864456	10864483	Rt1c	14	1614	5.5	8.5	7.0	1.8	1641	chr2L	10862842	3` UTR	CR43807 -	chr2L	10863662	intron	CR43807 -	chr2L	10864483	3` UTR	CR43807 -	chr2L_14_10860001	chr2L_10860001	W2
275	chr2L	10946949	10946976	chr2L	10956165	10956192	roo	10	9216	5.0	5.5	5.2	1.6	9243	chr2L	10946949	intron	dpr2 -	chr2L	10951570	intron	dpr2 -	chr2L	10956192	intron	dpr2 -	chr2L_10_10950001	chr2L_10950001	W2
285	chr2L	11540587	11540611	chr2L	11547990	11548014	Tabor	10	7403	2.5	5.0	3.8	2.1	7427	chr2L	11540587	intergenic	not near genes	chr2L	11544300	intergenic	not near genes	chr2L	11548014	intergenic	not near genes	chr2L_10_11540001	chr2L_11540001	W2
287	chr2L	11563633	11563668	chr2L	11568838	11568873	copia	15	5204	4.5	5.0	4.8	2.6	5240	chr2L	11563633	intergenic	not near genes	chr2L	11566253	intergenic	not near genes	chr2L	11568873	intergenic	not near genes	chr2L_15_11565001	chr2L_11565001	W2
289	chr2L	11614052	11614082	chr2L	11615548	11615578	hopper2	9	1496	3.0	6.0	4.5	1.6	1526	chr2L	11614052	intron	kek2 +	chr2L	11614815	intron	kek2 +	chr2L	11615578	intron	kek2 +	chr2L_9_11610001	chr2L_11610001	W2
291	chr2L	11713509	11713536	chr2L	11720978	11721005	blood	12	7469	6.0	7.0	6.5	1.6	7496	chr2L	11713509	intergenic	not near genes	chr2L	11717257	intergenic	not near genes	chr2L	11721005	intergenic	CR44143 +	chr2L_12_11715001	chr2L_11715001	W2
298	chr2L	12067328	12067360	chr2L	12074381	12074413	297	11	7053	6.5	1.5	4.0	2.2	7085	chr2L	12067328	intergenic	not near genes	chr2L	12070870	intergenic	not near genes	chr2L	12074413	intergenic	not near genes	chr2L_11_12070001	chr2L_12070001	W2
313	chr2L	12558317	12558352	chr2L	12565447	12565482	HMS-Beagle	13	7130	5.0	7.0	6.0	1.9	7165	chr2L	12558317	intergenic	not near genes	chr2L	12561900	intergenic	not near genes	chr2L	12565482	intergenic	not near genes	chr2L_13_12560001	chr2L_12560001	W2
320	chr2L	12728922	12728945	chr2L	12729163	12729186	pogo	11	241	3.0	2.5	2.8	2.9	264	chr2L	12728922	intron	MRP +	chr2L	12729054	intron	MRP +	chr2L	12729186	exon	MRP +	chr2L_11_12725001	chr2L_12725001	W2
321	chr2L	12731055	12731070	chr2L	12735823	12735838	F-element	7	4768	5.0	7.0	6.0	1.0	4783	chr2L	12731055	intron	MRP +	chr2L	12733446	intron	MRP +	chr2L	12735838	intron	MRP +	chr2L_7_12730001	chr2L_12730001	W2
322	chr2L	12739173	12739204	chr2L	12743955	12743986	Doc	14	4782	3.0	7.5	5.2	2.3	4813	chr2L	12739173	exon	MRP +	chr2L	12741580	intron	MRP +	chr2L	12743986	exon	MRP +	chr2L_14_12740001	chr2L_12740001	W2
325	chr2L	12763863	12763870	chr2L	12764064	12764071	BS	7	201	0.0	3.5	1.8	2.5	208	chr2L	12763863	intergenic	not near genes	chr2L	12763967	intergenic	not near genes	chr2L	12764071	intergenic	not near genes	chr2L_7_12760001	chr2L_12760001	W2
328	chr2L	12791604	12791632	chr2L	12795280	12795308	F-element	12	3676	5.0	3.0	4.0	2.4	3704	chr2L	12791604	intergenic	not near genes	chr2L	12793456	intergenic	not near genes	chr2L	12795308	intergenic	not near genes	chr2L_12_12790001	chr2L_12790001	W2
333	chr2L	12861692	12861728	chr2L	12863160	12863196	hobo	19	1468	2.5	2.5	2.5	5.4	1504	chr2L	12861692	intergenic	not near genes	chr2L	12862444	intergenic	not near genes	chr2L	12863196	intergenic	not near genes	chr2L_19_12860001	chr2L_12860001	W2
335	chr2L	12894018	12894021	chr2L	12895486	12895489	hobo	5	1468	15.0	7.0	11.0	0.4	1471	chr2L	12894018	intergenic	not near genes	chr2L	12894754	intergenic	not near genes	chr2L	12895489	intergenic	not near genes	chr2L_5_12890001	chr2L_12890001	W2
336	chr2L	12894026	12894054	chr2L	12895483	12895522	hobo	25	1467	8.5	6.5	7.5	2.9	1496	chr2L	12894026	intergenic	not near genes	chr2L	12894774	intergenic	not near genes	chr2L	12895522	intergenic	not near genes	chr2L_25_12890001	chr2L_12890001	W2
337	chr2L	12933851	12933882	chr2L	12941319	12941350	blood	14	7468	3.5	9.0	6.2	1.9	7499	chr2L	12933851	intergenic	not near genes	chr2L	12937600	intergenic	not near genes	chr2L	12941350	intergenic	not near genes	chr2L_14_12935001	chr2L_12935001	W2
340	chr2L	13036249	13036272	chr2L	13036492	13036515	X-element	5	243	9.5	13.0	11.2	0.4	266	chr2L	13036249	intron	CG9932 -	chr2L	13036382	intron	CG9932 -	chr2L	13036515	intron	CG9932 -	chr2L_5_13035001	chr2L_13035001	W2
350	chr2L	13241958	13241970	chr2L	13244343	13244355	BS	6	2385	11.5	7.5	9.5	0.6	2397	chr2L	13241958	5` UTR	CR45330 +	chr2L	13243156	intron	CR45330 +	chr2L	13244355	5` UTR	CR45330 +	chr2L_6_13240001	chr2L_13240001	W2
354	chr2L	13405647	13405672	chr2L	13410445	13410470	Doc	12	4798	5.0	4.0	4.5	2.2	4823	chr2L	13405647	exon	CG7110 +	chr2L	13408058	intron	CG7110 +	chr2L	13410470	intron	CG7110 +	chr2L_12_13405001	chr2L_13405001	W2
355	chr2L	13449460	13449496	chr2L	13456897	13456933	Quasimodo	20	7437	4.5	7.5	6.0	2.9	7473	chr2L	13449460	intron,5` UTR	CG42784 +,Hsp60D -	chr2L	13453196	intron	CG42784 +	chr2L	13456933	intron	CG42784 +	chr2L_20_13450001	chr2L_13450001	W2
356	chr2L	13481449	13481472	chr2L	13482057	13482080	jockey	16	608	10.0	8.5	9.2	1.6	631	chr2L	13481449	intron	CG42784 +	chr2L	13481764	intron	CG42784 +	chr2L	13482080	intron	CG42784 +	chr2L_16_13480001	chr2L_13480001	W2
357	chr2L	13522131	13522165	chr2L	13527650	13527684	Transpac	17	5519	4.0	5.0	4.5	3.1	5553	chr2L	13522131	intron	B4 -	chr2L	13524908	intron	B4 -	chr2L	13527684	intron	B4 -	chr2L_17_13520001	chr2L_13520001	W2
363	chr2L	13761803	13761825	chr2L	13762915	13762937	Doc	7	1111	7.5	3.0	5.2	1.1	1134	chr2L	13761803	intron	TM9SF4 +	chr2L	13762370	intron	TM9SF4 +	chr2L	13762937	intron	TM9SF4 +	chr2L_7_13760001	chr2L_13760001	W2
365	chr2L	13853082	13853117	chr2L	13862233	13862268	roo	17	9151	4.5	5.0	4.8	2.9	9186	chr2L	13853082	intron	CenG1A +	chr2L	13857675	intron	CenG1A +	chr2L	13862268	intron	CenG1A +	chr2L_17_13855001	chr2L_13855001	W2
375	chr2L	14465611	14465618	chr2L	14469089	14469096	hopper2	4	3478	2.5	2.5	2.5	1.1	3485	chr2L	14465611	intergenic	not near genes	chr2L	14467354	intergenic	not near genes	chr2L	14469096	intergenic	not near genes	chr2L_4_14465001	chr2L_14465001	W2
381	chr2L	14642570	14642603	chr2L	14651734	14651767	roo	15	9164	5.5	6.5	6.0	2.1	9197	chr2L	14642570	intron	osp -	chr2L	14647168	intron	osp -	chr2L	14651767	intron	osp -	chr2L_15_14645001	chr2L_14645001	W2
384	chr2L	14803880	14803912	chr2L	14809084	14809116	copia	13	5204	6.0	4.5	5.2	2.1	5236	chr2L	14803880	intergenic	not near genes	chr2L	14806498	intergenic	not near genes	chr2L	14809116	intergenic	not near genes	chr2L_13_14805001	chr2L_14805001	W2
387	chr2L	14889950	14889987	chr2L	14890376	14890413	jockey	18	426	6.0	6.5	6.2	2.5	463	chr2L	14889950	intergenic	not near genes	chr2L	14890182	intergenic	not near genes	chr2L	14890413	intergenic	not near genes	chr2L_18_14890001	chr2L_14890001	W2
389	chr2L	14984383	14984399	chr2L	14991986	14992002	opus	10	7603	5.5	3.0	4.2	1.9	7619	chr2L	14984383	intron	mol -	chr2L	14988192	intron	mol -	chr2L	14992002	intron	mol -	chr2L_10_14985001	chr2L_14985001	W2
408	chr2L	15446048	15446080	chr2L	15453518	15453550	blood	18	7470	3.0	4.0	3.5	4.0	7502	chr2L	15446048	intergenic	not near genes	chr2L	15449799	intergenic	not near genes	chr2L	15453550	intergenic	not near genes	chr2L_18_15445001	chr2L_15445001	W2
413	chr2L	15586407	15586438	chr2L	15593460	15593491	297	14	7053	3.5	1.0	2.2	4.4	7084	chr2L	15586407	intergenic	not near genes	chr2L	15589949	intergenic	not near genes	chr2L	15593491	intergenic	not near genes	chr2L_14_15585001	chr2L_15585001	W2
420	chr2L	15956021	15956055	chr2L	15957489	15957523	hobo	12	1468	5.5	3.0	4.2	2.3	1502	chr2L	15956021	intron	beat-Ib -	chr2L	15956772	intron	beat-Ib -	chr2L	15957523	intron	beat-Ib -	chr2L_12_15955001	chr2L_15955001	W2
427	chr2L	16071771	16071771	chr2L	16217660	16217660	copia	20	145889	20.5	22.0	21.2	0.9	145889	chr2L	16071771	intron	beat-Ia +	chr2L	16144716	intergenic	not near genes	chr2L	16217660	intergenic	not near genes	chr2L_20_16140001	chr2L_16140001	W2
429	chr2L	16141168	16141191	chr2L	16146376	16146399	copia	14	5208	0.0	2.0	1.0	7.0	5231	chr2L	16141168	intergenic	not near genes	chr2L	16143784	intergenic	not near genes	chr2L	16146399	intergenic	not near genes	chr2L_14_16140001	chr2L_16140001	W2
430	chr2L	16153733	16153757	chr2L	16160788	16160812	297	15	7055	6.0	3.5	4.8	2.6	7079	chr2L	16153733	intergenic	not near genes	chr2L	16157272	intergenic	not near genes	chr2L	16160812	intergenic	not near genes	chr2L_15_16155001	chr2L_16155001	W2
432	chr2L	16071771	16071771	chr2L	16217660	16217660	copia	17	145889	20.5	22.0	21.2	0.8	145889	chr2L	16071771	intron	beat-Ia +	chr2L	16144716	intergenic	not near genes	chr2L	16217660	intergenic	not near genes	chr2L_17_16140001	chr2L_16140001	W2
433	chr2L	16280253	16280286	chr2L	16281425	16281458	1360	12	1172	1.5	4.5	3.0	3.0	1205	chr2L	16280253	intron	crp -	chr2L	16280856	intron	crp -	chr2L	16281458	intron	crp -	chr2L_12_16280001	chr2L_16280001	W2
439	chr2L	16511984	16511995	chr2L	16519112	16519123	HMS-Beagle	6	7128	4.0	3.0	3.5	1.3	7139	chr2L	16511984	intron	CG5953 -	chr2L	16515554	intron	CG5953 -	chr2L	16519123	intron	CG5953 -	chr2L_6_16515001	chr2L_16515001	W2
444	chr2L	16958100	16958127	chr2L	16962889	16962916	Doc	11	4789	4.5	4.0	4.2	2.1	4816	chr2L	16958100	intergenic	not near genes	chr2L	16960508	intergenic	not near genes	chr2L	16962916	intergenic	not near genes	chr2L_11_16960001	chr2L_16960001	W2
453	chr2L	17167584	17167594	chr2L	17167825	17167835	pogo	5	241	4.0	1.5	2.8	1.3	251	chr2L	17167584	intron,intron	CG34106 +,beat-IIIa +	chr2L	17167710	intron,intron	CG34106 +,beat-IIIa +	chr2L	17167835	intron,intron	CG34106 +,beat-IIIa +	chr2L_5_17165001	chr2L_17165001	W2
456	chr2L	17199159	17199184	chr2L	17200627	17200652	hobo	6	1468	4.5	1.5	3.0	1.5	1493	chr2L	17199159	intron	beat-IIIc -	chr2L	17199906	intron	beat-IIIc -	chr2L	17200652	intron	beat-IIIc -	chr2L_6_17195001	chr2L_17195001	W2
458	chr2L	17273188	17273226	chr2L	17277972	17278010	F-element	17	4784	4.0	4.5	4.2	3.3	4822	chr2L	17273188	intergenic	not near genes	chr2L	17275599	intergenic	not near genes	chr2L	17278010	intergenic	not near genes	chr2L_17_17275001	chr2L_17275001	W2
465	chr2L	17819922	17819955	chr2L	17825126	17825159	copia	15	5204	4.0	4.0	4.0	3.0	5237	chr2L	17819922	intron	CadN2 -	chr2L	17822540	intron	CadN2 -	chr2L	17825159	intron	CadN2 -	chr2L_15_17820001	chr2L_17820001	W2
467	chr2L	17911955	17911988	chr2L	17914142	17914175	pogo	18	2187	9.0	5.5	7.2	2.2	2220	chr2L	17911955	intergenic	not near genes	chr2L	17913065	intergenic	not near genes	chr2L	17914175	intergenic	CG43271 -	chr2L_18_17910001	chr2L_17910001	W2
469	chr2L	17951951	17951980	chr2L	17953419	17953448	hobo	15	1468	3.5	5.5	4.5	2.7	1497	chr2L	17951951	intergenic	CR44398 -,CR44397 -	chr2L	17952700	intergenic	not near genes	chr2L	17953448	intergenic	not near genes	chr2L_15_17950001	chr2L_17950001	W2
470	chr2L	18051873	18051894	chr2L	18061021	18061042	roo	9	9148	10.0	3.5	6.8	1.2	9169	chr2L	18051873	intron	rdo +	chr2L	18056458	intron	rdo +	chr2L	18061042	intron	rdo +	chr2L_9_18055001	chr2L_18055001	W2
477	chr2L	18408022	18408054	chr2L	18412807	18412839	Doc	17	4785	4.5	0.0	2.2	5.3	4817	chr2L	18408022	intergenic	not near genes	chr2L	18410430	intergenic	not near genes	chr2L	18412839	intergenic	not near genes	chr2L_17_18410001	chr2L_18410001	W2
487	chr2L	19147367	19147401	chr2L	19154403	19154437	297	13	7036	5.5	2.5	4.0	2.6	7070	chr2L	19147367	intron	brat +	chr2L	19150902	intron	brat +	chr2L	19154437	intron	brat +	chr2L_13_19150001	chr2L_19150001	W2
489	chr2L	19345016	19345044	chr2L	19357226	19357254	blood	13	12210	4.5	9.5	7.0	1.6	12238	chr2L	19345016	intron	dnt -	chr2L	19351135	intron	dnt -	chr2L	19357254	intron	dnt -	chr2L_13_19350001	chr2L_19350001	W2
503	chr2L	19620089	19620132	chr2L	19621079	19621122	jockey	18	990	3.5	3.0	3.2	4.3	1033	chr2L	19620089	intron	Lar +	chr2L	19620606	intron	Lar +	chr2L	19621122	intron	Lar +	chr2L_18_19620001	chr2L_19620001	W2
505	chr2L	19652567	19652601	chr2L	19674004	19674038	opus	13	21437	2.0	4.5	3.2	3.1	21471	chr2L	19652567	intron	Lar +	chr2L	19663302	intron	Lar +	chr2L	19674038	intron	Lar +	chr2L_13_19660001	chr2L_19660001	W2
509	chr2L	19703535	19703567	chr2L	19712672	19712704	roo	17	9137	3.0	7.5	5.2	2.7	9169	chr2L	19703535	intron	Lar +	chr2L	19708120	intron	Lar +	chr2L	19712704	intron	Lar +	chr2L_17_19705001	chr2L_19705001	W2
510	chr2L	19737356	19737368	chr2L	19740826	19740838	1360	4	3470	11.0	6.5	8.8	0.4	3482	chr2L	19737356	intergenic	Nf-YB +	chr2L	19739097	intergenic	not near genes	chr2L	19740838	intergenic	not near genes	chr2L_4_19735001	chr2L_19735001	W2
511	chr2L	19737370	19737385	chr2L	19740824	19740855	1360	9	3468	8.0	5.5	6.8	1.2	3485	chr2L	19737370	intergenic	Nf-YB +	chr2L	19739112	intergenic	not near genes	chr2L	19740855	intergenic	not near genes	chr2L_9_19735001	chr2L_19735001	W2
512	chr2L	19762813	19762840	chr2L	19763056	19763083	pogo	11	243	8.5	9.0	8.8	1.1	270	chr2L	19762813	5` UTR	fbp -	chr2L	19762948	intron	fbp -	chr2L	19763083	intron	fbp -	chr2L_11_19760001	chr2L_19760001	W2
519	chr2L	20005870	20005892	chr2L	20010947	20010969	flea	13	5077	4.0	5.0	4.5	2.4	5099	chr2L	20005870	intron	CG43861 -	chr2L	20008420	intron	CG43861 -	chr2L	20010969	intron	CG43861 -	chr2L_13_20005001	chr2L_20005001	W2
526	chr2L	20272109	20272143	chr2L	20282821	20282855	copia	16	10712	6.5	11.5	9.0	1.6	10746	chr2L	20272109	intergenic	not near genes	chr2L	20277482	intergenic	not near genes	chr2L	20282855	intergenic	not near genes	chr2L_16_20275001	chr2L_20275001	W2
528	chr2L	20303159	20303190	chr2L	20310628	20310659	blood	13	7469	4.5	6.5	5.5	2.0	7500	chr2L	20303159	intergenic	not near genes	chr2L	20306909	intergenic	not near genes	chr2L	20310659	intergenic	not near genes	chr2L_13_20305001	chr2L_20305001	W2
531	chr2L	20568660	20568687	chr2L	20569051	20569078	X-element	13	391	2.5	5.0	3.8	2.7	418	chr2L	20568660	intron	CR45347 +	chr2L	20568869	intron	CR45347 +	chr2L	20569078	intron	CR45347 +	chr2L_13_20565001	chr2L_20565001	W2
532	chr2L	20576238	20576248	chr2L	20583708	20583718	blood	6	7470	7.5	6.5	7.0	0.8	7480	chr2L	20576238	intergenic	not near genes	chr2L	20579978	intergenic	not near genes	chr2L	20583718	3` UTR	CR44909 -	chr2L_6_20575001	chr2L_20575001	W2
535	chr2L	20639510	20639526	chr2L	20639787	20639803	INE-1	6	277	5.0	8.0	6.5	0.8	293	chr2L	20639510	intergenic	not near genes	chr2L	20639656	intergenic	CG31680 +	chr2L	20639803	intergenic	CG31680 +	chr2L_6_20635001	chr2L_20635001	W2
543	chr2L	20891533	20891545	chr2L	20896635	20896647	jockey	8	5102	3.5	6.5	5.0	1.3	5114	chr2L	20891533	intron,intron	CG43739 -,sky -	chr2L	20894090	intron,intron	CG43739 -,sky -	chr2L	20896647	intron,intron	CG43739 -,sky -	chr2L_8_20890001	chr2L_20890001	W2
544	chr2L	20901470	20901483	chr2L	20902635	20902648	1360	5	1165	4.5	0.5	2.5	1.4	1178	chr2L	20901470	intron,intron	CG43739 -,sky -	chr2L	20902059	intron,intron	CG43739 -,sky -	chr2L	20902648	intron,intron	CG43739 -,sky -	chr2L_5_20900001	chr2L_20900001	W2
549	chr2L	20976641	20976676	chr2L	20981457	20981492	X-element	13	4816	4.5	3.5	4.0	2.6	4851	chr2L	20976641	intron	CG42238 -	chr2L	20979066	intron	CG42238 -	chr2L	20981492	intron	CG42238 -	chr2L_13_20975001	chr2L_20975001	W2
551	chr2L	21020271	21020308	chr2L	21023949	21023986	NOF	13	3678	5.0	2.0	3.5	2.9	3715	chr2L	21020271	intron	CG42238 -	chr2L	21022128	intron	CG42238 -	chr2L	21023986	intron	CG42238 -	chr2L_13_21020001	chr2L_21020001	W2
552	chr2L	21041132	21041166	chr2L	21049394	21049428	Tirant	12	8262	3.5	3.0	3.2	2.9	8296	chr2L	21041132	intron	CG42238 -	chr2L	21045280	intron	CG42238 -	chr2L	21049428	intron	CG42238 -	chr2L_12_21045001	chr2L_21045001	W2
559	chr2L	21347551	21347582	chr2L	21355024	21355034	blood	13	7471	5.0	5.0	5.0	2.2	7483	chr2L	21347551	intron	Tsp39D +	chr2L	21351292	intron	Tsp39D +	chr2L	21355034	intron	Tsp39D +	chr2L_13_21350001	chr2L_21350001	W2
562	chr2L	21597029	21597063	chr2L	21604774	21604808	roo	15	7745	4.0	7.0	5.5	2.3	7779	chr2L	21597029	intergenic	not near genes	chr2L	21600918	intergenic	not near genes	chr2L	21604808	intergenic	not near genes	chr2L_15_21600001	chr2L_21600001	W2
563	chr2L	21691827	21691856	chr2L	21698298	21698327	Burdock	13	6471	3.0	0.5	1.8	4.6	6500	chr2L	21691827	intron	CG31619 +	chr2L	21695077	intron	CG31619 +	chr2L	21698327	intron	CG31619 +	chr2L_13_21695001	chr2L_21695001	W2
569	chr2L	21981682	21981707	chr2L	21990848	21990873	roo	14	9166	7.0	5.5	6.2	1.9	9191	chr2L	21981682	exon	CG2528 -	chr2L	21986278	intron	CG2528 -	chr2L	21990873	exon	CG2528 -	chr2L_14_21985001	chr2L_21985001	W2
580	chr2L	22258614	22258647	chr2L	22260739	22260772	G6	17	2125	5.0	5.0	5.0	2.8	2158	chr2L	22258614	intergenic	Tif-IA +	chr2L	22259693	intergenic	not near genes	chr2L	22260772	intergenic	not near genes	chr2L_17_22255001	chr2L_22255001	W2
581	chr2L	22548925	22548945	chr2L	22550151	22550171	1360	9	1226	0.0	7.5	3.8	1.9	1246	chr2L	22548925	intergenic	CG17490 +	chr2L	22549548	intergenic	not near genes	chr2L	22550171	intergenic	CG17493 +	chr2L_9_22545001	chr2L_22545001	W2
582	chr2L	22581969	22581998	chr2L	22583759	22583788	S-element	13	1790	3.5	3.5	3.5	2.9	1819	chr2L	22581969	intron	CG17494 +	chr2L	22582878	intron	CG17494 +	chr2L	22583788	intron	CG17494 +	chr2L_13_22580001	chr2L_22580001	W2
584	chr2L	22776427	22776446	chr2L	22778217	22778236	S-element	10	1790	6.0	6.0	6.0	1.4	1809	chr2L	22776427	intergenic	not near genes	chr2L	22777332	intergenic	not near genes	chr2L	22778236	intergenic	not near genes	chr2L_10_22775001	chr2L_22775001	W2
589	chr2R	529322	529356	chr2R	537948	537982	Max-element	11	8626	4.5	1.0	2.8	2.9	8660	chr2R	529322	intron	CG40378 +	chr2R	533652	intron	CG40378 +	chr2R	537982	intron	CG40378 +	chr2R_11_530001	chr2R_530001	W2
590	chr2R	1082365	1082384	chr2R	1087142	1087161	Doc	11	4777	8.5	5.0	6.8	1.4	4796	chr2R	1082365	intron	rl +	chr2R	1084763	intron	rl +	chr2R	1087161	intron	rl +	chr2R_11_1080001	chr2R_1080001	W2
592	chr2R	2498982	2499006	chr2R	2508130	2508154	roo	8	9148	9.0	4.0	6.5	1.1	9172	chr2R	2498982	intron	MFS17 -	chr2R	2503568	intron	MFS17 -	chr2R	2508154	intron	MFS17 -	chr2R_8_2500001	chr2R_2500001	W2
593	chr2R	2591545	2591558	chr2R	2594222	2594235	roo	7	2677	15.5	14.0	14.8	0.4	2690	chr2R	2591545	intergenic	not near genes	chr2R	2592890	intergenic	not near genes	chr2R	2594235	intergenic	not near genes	chr2R_7_2590001	chr2R_2590001	W2
594	chr2R	3144094	3144106	chr2R	3393373	3393385	Doc	7	249279	28.5	21.5	25.0	0.3	249291	chr2R	3144094	intron	CG42596 +	chr2R	3268740	intergenic	not near genes	chr2R	3393385	intergenic	not near genes	chr2R_7_3265001	chr2R_3265001	W2
597	chr2R	3526647	3526655	chr2R	3531378	3531386	F-element	5	4731	3.0	3.5	3.2	1.2	4739	chr2R	3526647	intergenic	not near genes	chr2R	3529016	intergenic	not near genes	chr2R	3531386	intergenic	not near genes	chr2R_5_3525001	chr2R_3525001	W2
599	chr2R	4838869	4838888	chr2R	4840393	4840412	transib2	6	1524	10.0	9.0	9.5	0.6	1543	chr2R	4838869	intergenic	not near genes	chr2R	4839640	intergenic	not near genes	chr2R	4840412	intergenic	not near genes	chr2R_6_4835001	chr2R_4835001	W2
613	chr2R	5417992	5418024	chr2R	5420625	5420657	Burdock	10	2632	5.5	5.0	5.2	1.6	2665	chr2R	5417992	intron	laccase2 +	chr2R	5419324	intron	laccase2 +	chr2R	5420657	intron	laccase2 +	chr2R_10_5415001	chr2R_5415001	W2
619	chr2R	5647826	5647838	chr2R	5648123	5648135	INE-1	4	297	11.0	3.0	7.0	0.5	309	chr2R	5647826	intron	CG11665 -	chr2R	5647980	intron	CG11665 -	chr2R	5648135	intron	CG11665 -	chr2R_4_5645001	chr2R_5645001	W2
623	chr2R	5869279	5869305	chr2R	5874356	5874382	flea	11	5077	3.5	4.0	3.8	2.3	5103	chr2R	5869279	intergenic	not near genes	chr2R	5871830	intergenic	not near genes	chr2R	5874382	intergenic	not near genes	chr2R_11_5870001	chr2R_5870001	W2
626	chr2R	5902154	5902180	chr2R	5909714	5909740	17.6	8	7560	8.5	3.5	6.0	1.1	7586	chr2R	5902154	intron	CG43366 +	chr2R	5905947	intron	CG43366 +	chr2R	5909740	intron	CG43366 +	chr2R_8_5905001	chr2R_5905001	W2
628	chr2R	6096718	6096752	chr2R	6101917	6101951	BS	16	5199	6.0	6.0	6.0	2.3	5233	chr2R	6096718	intron	EcR -	chr2R	6099334	intron	EcR -	chr2R	6101951	intron	EcR -	chr2R_16_6095001	chr2R_6095001	W2
635	chr2R	6494524	6494554	chr2R	6499286	6499317	F-element	6	4763	3.5	4.0	3.8	1.2	4793	chr2R	6494524	intergenic	not near genes	chr2R	6496920	intergenic	not near genes	chr2R	6499317	intergenic	not near genes	chr2R_6_6495001	chr2R_6495001	W2
638	chr2R	6579774	6579806	chr2R	6584861	6584893	flea	15	5087	4.5	3.5	4.0	3.0	5119	chr2R	6579774	intron	jing +	chr2R	6582334	intron	jing +	chr2R	6584893	intron	jing +	chr2R_15_6580001	chr2R_6580001	W2
641	chr2R	6952164	6952184	chr2R	6959745	6959765	opus	5	7581	3.5	4.5	4.0	1.0	7601	chr2R	6952164	intron,intron	mim -,CheB42c -	chr2R	6955964	intron,intron	mim -,CheB42c -	chr2R	6959765	intron,intron	mim -,CheB42c -	chr2R_5_6955001	chr2R_6955001	W2
647	chr2R	7196566	7196602	chr2R	7201342	7201378	F-element	12	4776	5.5	6.0	5.8	1.8	4812	chr2R	7196566	intron	pk +	chr2R	7198972	intron	pk +	chr2R	7201378	intron	pk +	chr2R_12_7195001	chr2R_7195001	W2
649	chr2R	7209869	7209874	chr2R	7217631	7217636	roo	4	7762	0.0	3.0	1.5	1.6	7767	chr2R	7209869	intron	pk +	chr2R	7213752	intron	pk +	chr2R	7217636	intron	pk +	chr2R_4_7210001	chr2R_7210001	W2
650	chr2R	7235814	7235852	chr2R	7240907	7240945	jockey	32	5092	6.5	6.5	6.5	4.3	5131	chr2R	7235814	intergenic	not near genes	chr2R	7238380	intergenic	not near genes	chr2R	7240945	intergenic	not near genes	chr2R_32_7235001	chr2R_7235001	W2
656	chr2R	7434898	7434913	chr2R	7439199	7439215	Juan	8	4302	7.0	8.0	7.5	0.9	4317	chr2R	7434898	intergenic	so +	chr2R	7437056	intergenic	not near genes	chr2R	7439215	intergenic	not near genes	chr2R_8_7435001	chr2R_7435001	W2
660	chr2R	7608405	7608436	chr2R	7613609	7613640	I-element	11	5204	5.5	6.5	6.0	1.6	5235	chr2R	7608405	intron	CG1358 -	chr2R	7611022	intron	CG1358 -	chr2R	7613640	intron	CG1358 -	chr2R_11_7610001	chr2R_7610001	W2
666	chr2R	7815672	7815701	chr2R	7822142	7822171	Burdock	17	6470	6.0	7.0	6.5	2.3	6499	chr2R	7815672	intergenic	CG1882 +	chr2R	7818922	intergenic	not near genes	chr2R	7822171	3` UTR	cathD -	chr2R_17_7815001	chr2R_7815001	W2
668	chr2R	7869187	7869215	chr2R	7873974	7874002	Doc	9	4787	4.0	4.5	4.2	1.7	4815	chr2R	7869187	intron	Dgk -	chr2R	7871594	intron	Dgk -	chr2R	7874002	intron	Dgk -	chr2R_9_7870001	chr2R_7870001	W2
675	chr2R	8330861	8330890	chr2R	8331347	8331377	roo	15	487	5.0	3.5	4.2	2.9	516	chr2R	8330861	intron	pdm3 +	chr2R	8331119	intron	pdm3 +	chr2R	8331377	intron	pdm3 +	chr2R_15_8330001	chr2R_8330001	W2
677	chr2R	8398207	8398244	chr2R	8402989	8403026	Doc	22	4782	6.0	3.5	4.8	3.8	4819	chr2R	8398207	intron	CG2121 -	chr2R	8400616	intron	CG2121 -	chr2R	8403026	intron	CG2121 -	chr2R_22_8400001	chr2R_8400001	W2
681	chr2R	8722763	8722793	chr2R	8723005	8723035	pogo	18	242	5.0	6.5	5.8	2.6	272	chr2R	8722763	intron	CG14767 -	chr2R	8722899	intron	CG14767 -	chr2R	8723035	intron	CG14767 -	chr2R_18_8720001	chr2R_8720001	W2
682	chr2R	8777929	8777945	chr2R	8784134	8784150	diver	9	6205	2.0	6.0	4.0	1.8	6221	chr2R	8777929	intergenic	not near genes	chr2R	8781040	intergenic	not near genes	chr2R	8784150	intergenic	not near genes	chr2R_9_8780001	chr2R_8780001	W2
687	chr2R	9151299	9151333	chr2R	9157770	9157804	Burdock	21	6471	4.0	5.5	4.8	3.6	6505	chr2R	9151299	exon	CG30345 +	chr2R	9154552	intergenic	not near genes	chr2R	9157804	intergenic	CG8008 -	chr2R_21_9150001	chr2R_9150001	W2
688	chr2R	9212692	9212723	chr2R	9213179	9213210	roo	13	487	7.5	6.0	6.8	1.7	518	chr2R	9212692	intergenic	CR45309 +	chr2R	9212951	intergenic	CR45309 +	chr2R	9213210	5` UTR	CR45309 +	chr2R_13_9210001	chr2R_9210001	W2
689	chr2R	9352254	9352255	chr2R	9361404	9361405	roo	4	9150	3.5	8.5	6.0	0.6	9151	chr2R	9352254	intron	CG13954 -	chr2R	9356830	intron	CG13954 -	chr2R	9361405	intron	CG13954 -	chr2R_4_9355001	chr2R_9355001	W2
693	chr2R	9480076	9480110	chr2R	9490608	9490642	roo	18	10532	7.0	4.5	5.8	2.6	10566	chr2R	9480076	intergenic	not near genes	chr2R	9485359	intergenic	not near genes	chr2R	9490642	intergenic	not near genes	chr2R_18_9485001	chr2R_9485001	W2
702	chr2R	9726613	9726645	chr2R	9734165	9734197	17.6	10	7552	1.0	6.0	3.5	2.2	7584	chr2R	9726613	intron	sqa -	chr2R	9730405	intron	sqa -	chr2R	9734197	intron	sqa -	chr2R_10_9730001	chr2R_9730001	W2
704	chr2R	9871037	9871074	chr2R	9871524	9871561	roo	12	486	2.0	1.5	1.8	4.3	524	chr2R	9871037	intron	cbx -	chr2R	9871299	intron	cbx -	chr2R	9871561	intron,5` UTR	cbx -,CG18446 +	chr2R_12_9870001	chr2R_9870001	W2
706	chr2R	9945438	9945471	chr2R	9945635	9945668	BS	11	197	6.5	3.0	4.8	1.9	230	chr2R	9945438	intron	Mef2 -	chr2R	9945553	intron	Mef2 -	chr2R	9945668	intron	Mef2 -	chr2R_11_9945001	chr2R_9945001	W2
708	chr2R	10005850	10005881	chr2R	10007016	10007046	1360	12	1166	4.0	8.0	6.0	1.7	1196	chr2R	10005850	intron	Pka-R2 -	chr2R	10006448	intron	Pka-R2 -	chr2R	10007046	intron	Pka-R2 -	chr2R_12_10005001	chr2R_10005001	W2
713	chr2R	10176877	10176913	chr2R	10186045	10186081	roo	13	9168	5.0	3.0	4.0	2.6	9204	chr2R	10176877	intron	KCNQ -	chr2R	10181479	intron	KCNQ -	chr2R	10186081	intron	KCNQ -	chr2R_13_10180001	chr2R_10180001	W2
733	chr2R	10585574	10585583	chr2R	10594158	10594167	Tirant	5	8584	7.5	8.0	7.8	0.6	8593	chr2R	10585574	intron	psq +	chr2R	10589870	intron	psq +	chr2R	10594167	intron	psq +	chr2R_5_10585001	chr2R_10585001	W2
734	chr2R	10622349	10622380	chr2R	10637115	10637146	mdg1	11	14766	6.5	5.5	6.0	1.6	14797	chr2R	10622349	intron	CG11883 +	chr2R	10629748	intron	CG11883 +	chr2R	10637146	intron	CG11883 +	chr2R_11_10625001	chr2R_10625001	W2
741	chr2R	10979663	10979679	chr2R	10980134	10980150	297	7	471	5.0	5.5	5.2	1.1	487	chr2R	10979663	intergenic	not near genes	chr2R	10979906	intergenic	not near genes	chr2R	10980150	intergenic	not near genes	chr2R_7_10975001	chr2R_10975001	W2
743	chr2R	11009818	11009848	chr2R	11018993	11019023	roo	17	9175	3.5	2.5	3.0	4.2	9205	chr2R	11009818	intron	luna -	chr2R	11014420	intron	luna -	chr2R	11019023	intron	luna -	chr2R_17_11010001	chr2R_11010001	W2
744	chr2R	11019876	11019912	chr2R	11024943	11024979	jockey	21	5067	4.0	4.5	4.2	4.0	5103	chr2R	11019876	intron	luna -	chr2R	11022428	intron	luna -	chr2R	11024979	intron	luna -	chr2R_21_11020001	chr2R_11020001	W2
749	chr2R	11207811	11207848	chr2R	11208005	11208042	BS	9	194	6.5	5.5	6.0	1.3	231	chr2R	11207811	intron	shn +	chr2R	11207926	intron	shn +	chr2R	11208042	intron	shn +	chr2R_9_11205001	chr2R_11205001	W2
752	chr2R	11297618	11297651	chr2R	11301940	11301973	flea	24	4322	9.0	9.0	9.0	2.4	4355	chr2R	11297618	intergenic	CG42336 -	chr2R	11299796	intergenic	not near genes	chr2R	11301973	5` UTR	CG7741 +	chr2R_24_11295001	chr2R_11295001	W2
753	chr2R	11415515	11415551	chr2R	11418665	11418701	opus	25	3150	7.5	4.0	5.8	3.7	3186	chr2R	11415515	intron	Drip -	chr2R	11417108	intron	Drip -	chr2R	11418701	intron	Drip -	chr2R_25_11415001	chr2R_11415001	W2
756	chr2R	11472646	11472679	chr2R	11473844	11473877	pogo	14	1198	5.0	6.0	5.5	2.2	1231	chr2R	11472646	intergenic	not near genes	chr2R	11473262	intergenic	not near genes	chr2R	11473877	intergenic	not near genes	chr2R_14_11470001	chr2R_11470001	W2
771	chr2R	12481142	12481169	chr2R	12482947	12482974	roo	7	1805	3.5	9.5	6.5	0.9	1832	chr2R	12481142	exon	Dh44-R2 +	chr2R	12482058	intron	Dh44-R2 +	chr2R	12482974	intron	Dh44-R2 +	chr2R_7_12480001	chr2R_12480001	W2
772	chr2R	12501688	12501724	chr2R	12503851	12503887	Rt1c	14	2163	1.5	6.0	3.8	2.9	2199	chr2R	12501688	intron	fdl -	chr2R	12502788	intron	fdl -	chr2R	12503887	intron	fdl -	chr2R_14_12500001	chr2R_12500001	W2
778	chr2R	12707517	12707548	chr2R	12715884	12715915	roo	7	8367	2.0	3.0	2.5	2.0	8398	chr2R	12707517	intron	CG42663 +	chr2R	12711716	intron	CG42663 +	chr2R	12715915	intron	CG42663 +	chr2R_7_12710001	chr2R_12710001	W2
782	chr2R	12789292	12789328	chr2R	12797656	12797691	roo	21	8364	1.5	5.0	3.2	5.0	8399	chr2R	12789292	intron,3` UTR	sca +,CR45137 -	chr2R	12793492	intron,intron	sca +,CR45137 -	chr2R	12797691	intron,3` UTR	sca +,CR45137 -	chr2R_21_12790001	chr2R_12790001	W2
784	chr2R	12819448	12819477	chr2R	12824526	12824555	jockey	10	5077	4.5	5.0	4.8	1.7	5107	chr2R	12819448	intergenic	not near genes	chr2R	12822002	intergenic	not near genes	chr2R	12824555	intergenic	not near genes	chr2R_10_12820001	chr2R_12820001	W2
786	chr2R	13136839	13136866	chr2R	13141638	13141665	Doc	12	4799	3.0	7.0	5.0	2.0	4826	chr2R	13136839	exon	Cap-G +	chr2R	13139252	intron	Cap-G +	chr2R	13141665	intron	Cap-G +	chr2R_12_13135001	chr2R_13135001	W2
799	chr2R	13580505	13580531	chr2R	13580856	13580882	jockey	13	351	0.5	6.0	3.2	3.1	377	chr2R	13580505	3` UTR	CG6191 -	chr2R	13580694	3` UTR,3` UTR	CG6191 -,CG45088 -	chr2R	13580882	3` UTR,3` UTR	CG6191 -,CG45088 -	chr2R_13_13580001	chr2R_13580001	W2
808	chr2R	13728131	13728156	chr2R	13735789	13735814	opus	14	7658	5.0	3.5	4.2	2.7	7683	chr2R	13728131	intron	fas +	chr2R	13731972	intron	fas +	chr2R	13735814	intron	fas +	chr2R_14_13730001	chr2R_13730001	W2
814	chr2R	13905605	13905628	chr2R	13907588	13907611	Rt1a	12	1983	6.5	9.0	7.8	1.4	2006	chr2R	13905605	intron	shot -	chr2R	13906608	intron	shot -	chr2R	13907611	intron	shot -	chr2R_12_13905001	chr2R_13905001	W2
825	chr2R	14394228	14394247	chr2R	14399018	14399037	Doc	9	4790	7.0	6.5	6.8	1.2	4809	chr2R	14394228	intergenic	not near genes	chr2R	14396632	intergenic	not near genes	chr2R	14399037	intergenic	not near genes	chr2R_9_14395001	chr2R_14395001	W2
826	chr2R	14467305	14467323	chr2R	14476464	14476482	roo	10	9159	5.0	4.0	4.5	1.8	9177	chr2R	14467305	intergenic	not near genes	chr2R	14471894	intergenic	not near genes	chr2R	14476482	5` UTR	CR44462 +	chr2R_10_14470001	chr2R_14470001	W2
839	chr2R	14889208	14889230	chr2R	14897817	14897839	Max-element	10	8609	5.0	1.0	3.0	2.5	8631	chr2R	14889208	intergenic	Cyp6a8 -	chr2R	14893524	intergenic	not near genes	chr2R	14897839	intergenic	not near genes	chr2R_10_14890001	chr2R_14890001	W2
845	chr2R	15004722	15004760	chr2R	15005052	15005090	jockey	14	330	5.5	4.5	5.0	2.3	368	chr2R	15004722	intergenic	not near genes	chr2R	15004906	intergenic	not near genes	chr2R	15005090	intergenic	not near genes	chr2R_14_15000001	chr2R_15000001	W2
847	chr2R	15015456	15015485	chr2R	15022879	15022910	mdg1	7	7425	5.0	2.5	3.8	1.5	7454	chr2R	15015456	intron	hbs +	chr2R	15019183	intron	hbs +	chr2R	15022910	intron	hbs +	chr2R_7_15015001	chr2R_15015001	W2
849	chr2R	15084977	15085005	chr2R	15092027	15092055	297	20	7050	8.0	3.0	5.5	3.1	7078	chr2R	15084977	intergenic	not near genes	chr2R	15088516	intergenic	not near genes	chr2R	15092055	5` UTR	CR44457 +	chr2R_20_15085001	chr2R_15085001	W2
851	chr2R	15119318	15119345	chr2R	15127800	15127827	Tirant	18	8482	10.0	5.5	7.8	2.0	8509	chr2R	15119318	intron	chn +	chr2R	15123572	intron	chn +	chr2R	15127827	intron	chn +	chr2R_18_15120001	chr2R_15120001	W2
881	chr2R	16539635	16539671	chr2R	16544845	16544881	copia	11	5210	3.5	2.5	3.0	2.8	5246	chr2R	16539635	intergenic	not near genes	chr2R	16542258	intergenic	not near genes	chr2R	16544881	intergenic	not near genes	chr2R_11_16540001	chr2R_16540001	W2
893	chr2R	17147241	17147268	chr2R	17152273	17152300	jockey	10	5032	6.5	6.0	6.2	1.4	5059	chr2R	17147241	intergenic	not near genes	chr2R	17149770	intergenic	not near genes	chr2R	17152300	intergenic	not near genes	chr2R_10_17145001	chr2R_17145001	W2
895	chr2R	17176353	17176388	chr2R	17182544	17182579	diver	21	6191	2.0	4.5	3.2	5.0	6226	chr2R	17176353	intergenic	not near genes	chr2R	17179466	intergenic	not near genes	chr2R	17182579	intergenic	not near genes	chr2R_21_17175001	chr2R_17175001	W2
897	chr2R	17236505	17236541	chr2R	17241710	17241746	copia	15	5205	3.0	5.0	4.0	3.0	5241	chr2R	17236505	intron	mbl +	chr2R	17239126	intron	mbl +	chr2R	17241746	intron	mbl +	chr2R_15_17235001	chr2R_17235001	W2
899	chr2R	17277236	17277242	chr2R	17277645	17277651	jockey	4	409	7.5	9.0	8.2	0.4	415	chr2R	17277236	intron	mbl +	chr2R	17277444	intron	mbl +	chr2R	17277651	intron	mbl +	chr2R_4_17275001	chr2R_17275001	W2
903	chr2R	17485914	17485946	chr2R	17490677	17490709	F-element	13	4763	6.5	8.0	7.2	1.6	4795	chr2R	17485914	5` UTR,intron	CG43110 -,NT5E-2 +	chr2R	17488312	intron	NT5E-2 +	chr2R	17490709	intron	NT5E-2 +	chr2R_13_17485001	chr2R_17485001	W2
915	chr2R	17782361	17782390	chr2R	17783565	17783594	pogo	4	1204	4.5	2.5	3.5	0.9	1233	chr2R	17782361	intergenic	CG33981 -,fab1 -	chr2R	17782978	intergenic	not near genes	chr2R	17783594	intergenic	mir-31a -	chr2R_4_17780001	chr2R_17780001	W2
916	chr2R	17784024	17784057	chr2R	17784266	17784299	pogo	18	242	2.5	6.5	4.5	3.3	275	chr2R	17784024	intergenic	mir-31a -	chr2R	17784162	intergenic	mir-31a -	chr2R	17784299	intergenic	mir-31a -	chr2R_18_17780001	chr2R_17780001	W2
922	chr2R	18111690	18111716	chr2R	18115559	18115585	F-element	12	3869	3.0	4.0	3.5	2.7	3895	chr2R	18111690	intergenic	not near genes	chr2R	18113638	intergenic	not near genes	chr2R	18115585	intergenic	not near genes	chr2R_12_18110001	chr2R_18110001	W2
930	chr2R	18358386	18358422	chr2R	18372599	18372635	roo	17	14213	5.0	7.0	6.0	2.4	14249	chr2R	18358386	intergenic	not near genes	chr2R	18365510	intergenic	not near genes	chr2R	18372635	intergenic	not near genes	chr2R_17_18365001	chr2R_18365001	W2
934	chr2R	18487846	18487853	chr2R	18495317	18495324	blood	7	7471	0.0	10.5	5.2	1.1	7478	chr2R	18487846	intron	CG30116 -	chr2R	18491585	intron	CG30116 -	chr2R	18495324	intron	CG30116 -	chr2R_7_18490001	chr2R_18490001	W2
936	chr2R	18575801	18575830	chr2R	18581990	18582019	3S18	12	6188	4.0	9.0	6.5	1.6	6218	chr2R	18575801	intron	GEFmeso -	chr2R	18578910	intron	GEFmeso -	chr2R	18582019	intron	GEFmeso -	chr2R_12_18575001	chr2R_18575001	W2
937	chr2R	18590864	18590901	chr2R	18600017	18600054	roo	14	9153	5.0	2.5	3.8	2.9	9190	chr2R	18590864	intron	GEFmeso -	chr2R	18595459	intron	GEFmeso -	chr2R	18600054	intron	GEFmeso -	chr2R_14_18595001	chr2R_18595001	W2
951	chr2R	19776593	19776630	chr2R	19779917	19779954	jockey	19	3324	1.5	5.0	3.2	4.5	3361	chr2R	19776593	intergenic	not near genes	chr2R	19778274	intergenic	not near genes	chr2R	19779954	intergenic	not near genes	chr2R_19_19775001	chr2R_19775001	W2
955	chr2R	19914843	19914874	chr2R	19922256	19922287	mdg1	9	7413	10.0	6.5	8.2	1.0	7444	chr2R	19914843	intergenic	not near genes	chr2R	19918565	intergenic	not near genes	chr2R	19922287	intergenic	not near genes	chr2R_9_19915001	chr2R_19915001	W2
958	chr2R	19957427	19957461	chr2R	19962630	19962664	copia	8	5203	1.5	3.0	2.2	2.5	5237	chr2R	19957427	intergenic	CG44623 +	chr2R	19960046	intergenic	not near genes	chr2R	19962664	intergenic	not near genes	chr2R_8_19960001	chr2R_19960001	W2
959	chr2R	20069241	20069271	chr2R	20071872	20071902	opus	12	2631	3.0	3.5	3.2	2.9	2661	chr2R	20069241	intergenic	not near genes	chr2R	20070572	intergenic	not near genes	chr2R	20071902	intergenic	not near genes	chr2R_12_20070001	chr2R_20070001	W2
971	chr2R	20739443	20739476	chr2R	20744212	20744245	F-element	11	4769	6.0	6.0	6.0	1.6	4802	chr2R	20739443	intron	dpr +	chr2R	20741844	intron	dpr +	chr2R	20744245	intron	dpr +	chr2R_11_20740001	chr2R_20740001	W2
972	chr2R	20783310	20783332	chr2R	20788083	20788105	F-element	12	4773	1.5	7.5	4.5	2.2	4795	chr2R	20783310	intergenic	not near genes	chr2R	20785708	intergenic	not near genes	chr2R	20788105	intergenic	CG43666 -	chr2R_12_20785001	chr2R_20785001	W2
980	chr2R	21151114	21151146	chr2R	21153748	21153780	opus	11	2634	4.0	2.0	3.0	2.8	2666	chr2R	21151114	intron	CG30389 -	chr2R	21152447	intron	CG30389 -	chr2R	21153780	intron	CG30389 -	chr2R_11_21150001	chr2R_21150001	W2
986	chr2R	21738275	21738304	chr2R	21747436	21747465	roo	6	9161	12.5	11.0	11.8	0.5	9190	chr2R	21738275	intergenic	not near genes	chr2R	21742870	intergenic	not near genes	chr2R	21747465	intergenic	not near genes	chr2R_6_21740001	chr2R_21740001	W2
987	chr2R	21753081	21753116	chr2R	21753567	21753602	roo	8	486	15.0	10.0	12.5	0.6	521	chr2R	21753081	intergenic	not near genes	chr2R	21753342	intergenic	not near genes	chr2R	21753602	intergenic	not near genes	chr2R_8_21750001	chr2R_21750001	W2
1001	chr2R	22349691	22349721	chr2R	22351476	22351506	jockey	14	1785	4.5	4.5	4.5	2.5	1815	chr2R	22349691	intron	Liprin-gamma -	chr2R	22350598	intron	Liprin-gamma -	chr2R	22351506	intron	Liprin-gamma -	chr2R_14_22350001	chr2R_22350001	W2
1002	chr2R	22360380	22360391	chr2R	22360814	22360825	jockey	9	434	8.5	2.5	5.5	1.4	445	chr2R	22360380	intron	Liprin-gamma -	chr2R	22360602	intron	Liprin-gamma -	chr2R	22360825	intron	Liprin-gamma -	chr2R_9_22360001	chr2R_22360001	W2
1006	chr2R	22525745	22525779	chr2R	22529301	22529335	jockey	14	3556	4.5	4.5	4.5	2.5	3590	chr2R	22525745	intron	px -	chr2R	22527540	intron	px -	chr2R	22529335	intron	px -	chr2R_14_22525001	chr2R_22525001	W2
1012	chr2R	22774960	22774999	chr2R	22775380	22775419	jockey	13	420	3.5	2.5	3.0	3.2	459	chr2R	22774960	intron	CG42260 -	chr2R	22775190	intron	CG42260 -	chr2R	22775419	intron	CG42260 -	chr2R_13_22775001	chr2R_22775001	W2
1014	chr2R	22843024	22843053	chr2R	22844987	22845016	flea	14	1963	5.0	8.0	6.5	1.9	1992	chr2R	22843024	intergenic	CG9826 +	chr2R	22844020	intergenic	not near genes	chr2R	22845016	intergenic	not near genes	chr2R_14_22840001	chr2R_22840001	W2
1029	chr2R	23402610	23402639	chr2R	23407687	23407716	flea	12	5077	5.5	7.5	6.5	1.6	5106	chr2R	23402610	intergenic	CG3520 -	chr2R	23405163	intergenic	not near genes	chr2R	23407716	intergenic	not near genes	chr2R_12_23405001	chr2R_23405001	W2
1036	chr2R	23529578	23529607	chr2R	23537150	23537184	412	15	7577	4.0	4.0	4.0	3.0	7606	chr2R	23529578	intron	bw -	chr2R	23533381	intron	bw -	chr2R	23537184	exon	bw -	chr2R_15_23530001	chr2R_23530001	W2
1045	chr2R	23914309	23914327	chr2R	23921934	23921952	412	6	7625	4.5	9.0	6.8	0.8	7643	chr2R	23914309	exon	kcc +	chr2R	23918130	intron	kcc +	chr2R	23921952	intron	kcc +	chr2R_6_23915001	chr2R_23915001	W2
1050	chr2R	24147065	24147093	chr2R	24154644	24154672	412	12	7579	7.0	4.0	5.5	1.8	7607	chr2R	24147065	intron	Dat +	chr2R	24150868	intron	Dat +	chr2R	24154672	intron	Dat +	chr2R_12_24150001	chr2R_24150001	W2
1051	chr2R	24177237	24177265	chr2R	24184723	24184751	412	12	7486	5.5	3.5	4.5	2.2	7514	chr2R	24177237	3` UTR	Nop60B +	chr2R	24180994	intron	Nop60B +	chr2R	24184751	3` UTR	Nop60B +	chr2R_12_24180001	chr2R_24180001	W2
1056	chr2R	24353429	24353458	chr2R	24361792	24361815	roo	14	8363	2.0	4.5	3.2	3.3	8386	chr2R	24353429	intron,intron	bs +,CR44811 -	chr2R	24357622	intron,intron	bs +,CR44811 -	chr2R	24361815	intron,intron	bs +,CR44811 -	chr2R_14_24355001	chr2R_24355001	W2
1066	chr2R	24647597	24647614	chr2R	24655155	24655172	412	4	7558	17.5	15.0	16.2	0.2	7575	chr2R	24647597	intergenic	not near genes	chr2R	24651384	intergenic	not near genes	chr2R	24655172	intergenic	not near genes	chr2R_4_24650001	chr2R_24650001	W2
1068	chr2R	24727881	24727912	chr2R	24735390	24735421	mdg1	12	7508	8.0	9.0	8.5	1.3	7540	chr2R	24727881	intron	Mid1 -	chr2R	24731651	intron	Mid1 -	chr2R	24735421	intron	Mid1 -	chr2R_12_24730001	chr2R_24730001	W2
1070	chr2R	24763608	24763644	chr2R	24765585	24765621	G2	21	1977	5.0	5.0	5.0	3.5	2013	chr2R	24763608	exon	CG3894 +	chr2R	24764614	intron	CG3894 +	chr2R	24765621	exon	CG3894 +	chr2R_21_24760001	chr2R_24760001	W2
1079	chr2R	25141651	25141677	chr2R	25159342	25159368	roo	8	17691	10.0	10.0	10.0	0.7	17717	chr2R	25141651	intergenic	not near genes	chr2R	25150510	intergenic	not near genes	chr2R	25159368	intergenic	not near genes	chr2R_8_25150001	chr2R_25150001	W2
1089	chr3L	110208	110244	chr3L	119376	119412	roo	20	9168	6.0	4.0	5.0	3.3	9204	chr3L	110208	intergenic	not near genes	chr3L	114810	intergenic	not near genes	chr3L	119412	intergenic	not near genes	chr3L_20_110001	chr3L_110001	W2
1094	chr3L	402686	402718	chr3L	409740	409772	297	14	7052	5.5	4.0	4.8	2.4	7086	chr3L	402686	intergenic	not near genes	chr3L	406229	intergenic	not near genes	chr3L	409772	intergenic	not near genes	chr3L_14_405001	chr3L_405001	W2
1106	chr3L	789914	789947	chr3L	790400	790433	roo	7	486	2.5	1.5	2.0	2.3	519	chr3L	789914	intergenic	not near genes	chr3L	790174	intergenic	not near genes	chr3L	790433	intergenic	not near genes	chr3L_7_790001	chr3L_790001	W2
1109	chr3L	857997	858031	chr3L	866479	866513	Tirant	14	8482	5.0	5.0	5.0	2.3	8516	chr3L	857997	intergenic	not near genes	chr3L	862255	intergenic	not near genes	chr3L	866513	5` UTR	CG12502 +	chr3L_14_860001	chr3L_860001	W2
1110	chr3L	925177	925206	chr3L	932604	932633	mdg1	6	7427	5.5	5.0	5.2	1.0	7456	chr3L	925177	intron	Glut1 +	chr3L	928905	intron	Glut1 +	chr3L	932633	intron	Glut1 +	chr3L_6_925001	chr3L_925001	W2
1113	chr3L	939771	939801	chr3L	940893	940923	jockey	18	1121	6.5	7.0	6.8	2.3	1152	chr3L	939771	intron	Glut1 +	chr3L	940347	intron	Glut1 +	chr3L	940923	intron	Glut1 +	chr3L_18_940001	chr3L_940001	W2
1120	chr3L	1047354	1047383	chr3L	1055167	1055196	412	16	7813	4.0	1.5	2.8	4.2	7842	chr3L	1047354	intron	bab1 -	chr3L	1051275	intron	bab1 -	chr3L	1055196	intron	bab1 -	chr3L_16_1050001	chr3L_1050001	W2
1123	chr3L	1154129	1154163	chr3L	1163280	1163314	roo	13	9151	2.0	4.5	3.2	3.1	9185	chr3L	1154129	intron	bab2 -	chr3L	1158722	intron	bab2 -	chr3L	1163314	intron	bab2 -	chr3L_13_1155001	chr3L_1155001	W2
1126	chr3L	1219593	1219625	chr3L	1227327	1227359	412	12	7734	2.5	2.0	2.2	3.8	7766	chr3L	1219593	intron	mwh +	chr3L	1223476	intron	mwh +	chr3L	1227359	intron	mwh +	chr3L_12_1220001	chr3L_1220001	W2
1135	chr3L	1505995	1506033	chr3L	1513593	1513631	17.6	21	7598	3.5	3.0	3.2	5.0	7636	chr3L	1505995	intron,intron	Psa +,cue -	chr3L	1509813	intron,intron	Psa +,cue -	chr3L	1513631	intron,intron	Psa +,cue -	chr3L_21_1505001	chr3L_1505001	W2
1142	chr3L	1740852	1740885	chr3L	1741096	1741129	pogo	17	244	7.0	7.0	7.0	2.1	277	chr3L	1740852	intron	Gk +	chr3L	1740990	intron	Gk +	chr3L	1741129	intron	Gk +	chr3L_17_1740001	chr3L_1740001	W2
1147	chr3L	2108249	2108279	chr3L	2113454	2113484	copia	9	5205	5.0	5.5	5.2	1.5	5235	chr3L	2108249	intron	sls -	chr3L	2110866	intron	sls -	chr3L	2113484	intron	sls -	chr3L_9_2110001	chr3L_2110001	W2
1155	chr3L	2447510	2447537	chr3L	2456661	2456694	roo	16	9157	5.5	4.0	4.8	2.8	9184	chr3L	2447510	intron	CG45186 +	chr3L	2452102	intron	CG45186 +	chr3L	2456694	intron	CG45186 +	chr3L_16_2450001	chr3L_2450001	W2
1169	chr3L	2927836	2927872	chr3L	2936114	2936150	Tirant	20	8278	4.5	3.5	4.0	4.0	8314	chr3L	2927836	intron	Shab +	chr3L	2931993	intron	Shab +	chr3L	2936150	intron	Shab +	chr3L_20_2930001	chr3L_2930001	W2
1170	chr3L	3061282	3061317	chr3L	3069866	3069901	Tirant	16	8584	4.0	4.5	4.2	3.1	8619	chr3L	3061282	intron	CG32486 -	chr3L	3065592	intron	CG32486 -	chr3L	3069901	intron	CG32486 -	chr3L_16_3065001	chr3L_3065001	W2
1175	chr3L	3281441	3281473	chr3L	3281932	3281970	Doc	16	497	4.0	5.0	4.5	2.9	529	chr3L	3281441	intron	CG12017 +	chr3L	3281706	intron	CG12017 +	chr3L	3281970	intron	CG12017 +	chr3L_16_3280001	chr3L_3280001	W2
1181	chr3L	3475073	3475110	chr3L	3475518	3475555	jockey	21	445	4.0	4.0	4.0	4.2	482	chr3L	3475073	intron	CG42324 +	chr3L	3475314	intron	CG42324 +	chr3L	3475555	intron	CG42324 +	chr3L_21_3475001	chr3L_3475001	W2
1188	chr3L	3601297	3601331	chr3L	3606609	3606643	copia	11	5312	4.5	7.0	5.8	1.6	5346	chr3L	3601297	intron	Eip63E +	chr3L	3603970	intron	Eip63E +	chr3L	3606643	intron	Eip63E +	chr3L_11_3600001	chr3L_3600001	W2
1198	chr3L	3833744	3833770	chr3L	3833986	3834012	pogo	13	242	3.5	2.0	2.8	3.4	268	chr3L	3833744	intron	enc +	chr3L	3833878	intron	enc +	chr3L	3834012	intron	enc +	chr3L_13_3830001	chr3L_3830001	W2
1205	chr3L	4328754	4328764	chr3L	4336252	4336262	412	6	7498	2.0	8.5	5.2	1.0	7508	chr3L	4328754	intron	Cip4 -	chr3L	4332508	intron	Cip4 -	chr3L	4336262	intron	Cip4 -	chr3L_6_4330001	chr3L_4330001	W2
1230	chr3L	4901126	4901155	chr3L	4907317	4907346	diver	11	6191	2.5	1.5	2.0	3.7	6220	chr3L	4901126	intergenic	CG13704 +	chr3L	4904236	intergenic	not near genes	chr3L	4907346	intergenic	not near genes	chr3L_11_4900001	chr3L_4900001	W2
1233	chr3L	5034162	5034189	chr3L	5043315	5043336	roo	7	9152	5.0	3.0	4.0	1.4	9174	chr3L	5034162	intron	Con -	chr3L	5038749	intron	Con -	chr3L	5043336	intron	Con -	chr3L_7_5035001	chr3L_5035001	W2
1234	chr3L	5045455	5045487	chr3L	5050237	5050269	Doc	13	4782	6.0	5.5	5.8	1.9	4814	chr3L	5045455	intron	Con -	chr3L	5047862	intron	Con -	chr3L	5050269	intron	Con -	chr3L_13_5045001	chr3L_5045001	W2
1251	chr3L	5537719	5537755	chr3L	5538062	5538098	jockey	14	342	4.5	7.0	5.8	2.1	379	chr3L	5537719	intergenic	not near genes	chr3L	5537908	intergenic	not near genes	chr3L	5538098	intergenic	CG10625 -	chr3L_14_5535001	chr3L_5535001	W2
1254	chr3L	5910032	5910062	chr3L	5910274	5910304	pogo	8	242	6.5	4.5	5.5	1.2	272	chr3L	5910032	intron	CG13288 +	chr3L	5910168	intron	CG13288 +	chr3L	5910304	intron	CG13288 +	chr3L_8_5910001	chr3L_5910001	W2
1256	chr3L	5926312	5926348	chr3L	5926503	5926539	BS	15	191	4.0	6.0	5.0	2.5	227	chr3L	5926312	intron	Vap-33B +	chr3L	5926426	intron	Vap-33B +	chr3L	5926539	intron	Vap-33B +	chr3L_15_5925001	chr3L_5925001	W2
1260	chr3L	6001682	6001698	chr3L	6004383	6004399	jockey	5	2701	4.0	1.5	2.8	1.3	2717	chr3L	6001682	intron	PVRAP +	chr3L	6003040	intron	PVRAP +	chr3L	6004399	intron	PVRAP +	chr3L_5_6000001	chr3L_6000001	W2
1261	chr3L	6040365	6040390	chr3L	6042722	6042747	Doc	10	2357	4.5	2.5	3.5	2.2	2382	chr3L	6040365	intergenic	Jon65Aiv +	chr3L	6041556	intergenic	not near genes	chr3L	6042747	intergenic	not near genes	chr3L_10_6040001	chr3L_6040001	W2
1268	chr3L	6220911	6220947	chr3L	6230064	6230100	roo	18	9153	5.5	4.0	4.8	3.1	9189	chr3L	6220911	5` UTR	pncr008:3L +	chr3L	6225506	intergenic	not near genes	chr3L	6230100	intergenic	not near genes	chr3L_18_6225001	chr3L_6225001	W2
1273	chr3L	6335009	6335043	chr3L	6335481	6335515	297	17	472	2.5	3.5	3.0	4.2	506	chr3L	6335009	intron	CG13300 -	chr3L	6335262	intron	CG13300 -	chr3L	6335515	intron	CG13300 -	chr3L_17_6335001	chr3L_6335001	W2
1276	chr3L	6405656	6405690	chr3L	6432121	6432155	roo	13	26465	4.5	5.0	4.8	2.2	26499	chr3L	6405656	intron	CG42747 +	chr3L	6418906	intron	CG42747 +	chr3L	6432155	intron	CG42747 +	chr3L_13_6415001	chr3L_6415001	W2
1290	chr3L	6781120	6781155	chr3L	6783134	6783169	Doc	15	2014	5.5	6.5	6.0	2.1	2049	chr3L	6781120	intergenic	not near genes	chr3L	6782144	intergenic	not near genes	chr3L	6783169	intergenic	not near genes	chr3L_15_6780001	chr3L_6780001	W2
1292	chr3L	6855934	6855956	chr3L	6860719	6860742	Doc	11	4785	2.5	6.5	4.5	2.0	4808	chr3L	6855934	intergenic	not near genes	chr3L	6858338	intergenic	not near genes	chr3L	6860742	intergenic	not near genes	chr3L_11_6855001	chr3L_6855001	W2
1293	chr3L	6887517	6887551	chr3L	6895010	6895044	roo	18	7493	4.0	8.0	6.0	2.6	7527	chr3L	6887517	intergenic	not near genes	chr3L	6891280	intergenic	not near genes	chr3L	6895044	intergenic	not near genes	chr3L_18_6890001	chr3L_6890001	W2
1297	chr3L	6994888	6994910	chr3L	6995500	6995521	BS	4	612	1.0	0.0	0.5	2.7	633	chr3L	6994888	intergenic	bin +	chr3L	6995204	intergenic	not near genes	chr3L	6995521	intergenic	not near genes	chr3L_4_6995001	chr3L_6995001	W2
1308	chr3L	7377314	7377348	chr3L	7380420	7380454	297	9	3106	2.5	7.5	5.0	1.5	3140	chr3L	7377314	intron	SMSr -	chr3L	7378884	intron	SMSr -	chr3L	7380454	intron	SMSr -	chr3L_9_7375001	chr3L_7375001	W2
1312	chr3L	7498759	7498790	chr3L	7503537	7503568	F-element	12	4778	4.5	7.0	5.8	1.8	4809	chr3L	7498759	5` UTR	CG8539 -	chr3L	7501164	intergenic	not near genes	chr3L	7503568	intergenic	not near genes	chr3L_12_7500001	chr3L_7500001	W2
1324	chr3L	7793711	7793739	chr3L	7800764	7800792	297	8	7053	3.0	7.0	5.0	1.3	7081	chr3L	7793711	intron	CG32369 -	chr3L	7797252	intron	CG32369 -	chr3L	7800792	intron	CG32369 -	chr3L_8_7795001	chr3L_7795001	W2
1329	chr3L	7886522	7886545	chr3L	7889041	7889064	Stalker4	8	2519	2.0	4.0	3.0	2.0	2542	chr3L	7886522	intron	CG32365 +	chr3L	7887793	intron	CG32365 +	chr3L	7889064	intron	CG32365 +	chr3L_8_7885001	chr3L_7885001	W2
1332	chr3L	7916830	7916862	chr3L	7926002	7926034	roo	18	9172	3.0	4.0	3.5	4.0	9204	chr3L	7916830	3` UTR	syd -	chr3L	7921432	intron	syd -	chr3L	7926034	3` UTR	syd -	chr3L_18_7920001	chr3L_7920001	W2
1334	chr3L	7985360	7985398	chr3L	7987689	7987727	NOF	17	2329	4.5	5.0	4.8	2.9	2367	chr3L	7985360	intron	nmo +	chr3L	7986544	intron	nmo +	chr3L	7987727	intron	nmo +	chr3L_17_7985001	chr3L_7985001	W2
1342	chr3L	8481769	8481796	chr3L	8490929	8490956	roo	12	9157	6.5	4.5	5.5	1.8	9187	chr3L	8481769	intron	CG43163 -	chr3L	8486362	intron	CG43163 -	chr3L	8490956	intron	CG43163 -	chr3L_12_8485001	chr3L_8485001	W2
1343	chr3L	8498294	8498325	chr3L	8505762	8505793	blood	14	7468	6.0	5.0	5.5	2.2	7499	chr3L	8498294	intron	CG43163 -	chr3L	8502044	intron	CG43163 -	chr3L	8505793	intron	CG43163 -	chr3L_14_8500001	chr3L_8500001	W2
1348	chr3L	8791273	8791289	chr3L	8796694	8796710	I-element	6	5421	8.0	0.0	4.0	1.2	5437	chr3L	8791273	exon	Fhos +	chr3L	8793992	intron	Fhos +	chr3L	8796710	intron	Fhos +	chr3L_6_8790001	chr3L_8790001	W2
1361	chr3L	9076926	9076960	chr3L	9084487	9084521	412	13	7561	6.0	6.5	6.2	1.8	7595	chr3L	9076926	exon	Tequila +	chr3L	9080724	intron	Tequila +	chr3L	9084521	exon	Tequila +	chr3L_13_9080001	chr3L_9080001	W2
1365	chr3L	9130557	9130582	chr3L	9134319	9134344	412	13	3762	3.5	4.0	3.8	2.7	3787	chr3L	9130557	intergenic	bol -	chr3L	9132450	intergenic	not near genes	chr3L	9134344	intergenic	Dhpr +	chr3L_13_9130001	chr3L_9130001	W2
1366	chr3L	9164701	9164727	chr3L	9166169	9166195	hobo	10	1468	5.0	3.5	4.2	1.9	1494	chr3L	9164701	intron	Rdl -	chr3L	9165448	intron	Rdl -	chr3L	9166195	intron	Rdl -	chr3L_10_9165001	chr3L_9165001	W2
1367	chr3L	9219241	9219276	chr3L	9219914	9219930	jockey	18	672	9.0	3.5	6.2	2.5	689	chr3L	9219241	intergenic	not near genes	chr3L	9219586	intergenic	not near genes	chr3L	9219930	intergenic	not near genes	chr3L_18_9215001	chr3L_9215001	W2
1369	chr3L	9270631	9270647	chr3L	9278383	9278399	roo	6	7752	3.0	7.5	5.2	1.0	7768	chr3L	9270631	intron	GluRIB +	chr3L	9274515	intron	GluRIB +	chr3L	9278399	exon	GluRIB +	chr3L_6_9270001	chr3L_9270001	W2
1377	chr3L	9443510	9443539	chr3L	9445302	9445331	S-element	12	1791	6.0	9.5	7.8	1.4	1821	chr3L	9443510	intron	CG33926 +	chr3L	9444420	intron	CG33926 +	chr3L	9445331	intron	CG33926 +	chr3L_12_9440001	chr3L_9440001	W2
1380	chr3L	9501697	9501730	chr3L	9502184	9502217	roo	7	487	5.0	1.5	3.2	1.7	520	chr3L	9501697	intron	path -	chr3L	9501957	intron	path -	chr3L	9502217	intron	path -	chr3L_7_9500001	chr3L_9500001	W2
1382	chr3L	9526482	9526511	chr3L	9528163	9528192	Doc	6	1681	3.5	2.5	3.0	1.5	1710	chr3L	9526482	intergenic	not near genes	chr3L	9527337	intergenic	not near genes	chr3L	9528192	intergenic	not near genes	chr3L_6_9525001	chr3L_9525001	W2
1383	chr3L	9533752	9533786	chr3L	9541313	9541347	412	13	7560	4.0	7.5	5.8	1.9	7595	chr3L	9533752	intergenic	not near genes	chr3L	9537550	intergenic	not near genes	chr3L	9541347	intergenic	not near genes	chr3L_13_9535001	chr3L_9535001	W2
1384	chr3L	9571900	9571935	chr3L	9572249	9572284	jockey	18	348	5.0	7.0	6.0	2.6	384	chr3L	9571900	intron	CG42673 +	chr3L	9572092	intron	CG42673 +	chr3L	9572284	intron	CG42673 +	chr3L_18_9570001	chr3L_9570001	W2
1385	chr3L	9575905	9575940	chr3L	9580984	9581012	jockey	12	5078	7.0	5.0	6.0	1.7	5107	chr3L	9575905	intron	CG42673 +	chr3L	9578458	intron	CG42673 +	chr3L	9581012	intron	CG42673 +	chr3L_12_9575001	chr3L_9575001	W2
1395	chr3L	9929680	9929700	chr3L	9938461	9938481	roo	9	8781	10.0	14.0	12.0	0.7	8801	chr3L	9929680	intron	CG34356 +	chr3L	9934080	intron	CG34356 +	chr3L	9938481	intron	CG34356 +	chr3L_9_9930001	chr3L_9930001	W2
1407	chr3L	10414942	10414974	chr3L	10417315	10417347	Doc	14	2373	4.5	6.5	5.5	2.2	2405	chr3L	10414942	intergenic	CG12362 +	chr3L	10416144	intergenic	not near genes	chr3L	10417347	intergenic	not near genes	chr3L_14_10415001	chr3L_10415001	W2
1422	chr3L	11087058	11087090	chr3L	11088847	11088880	S-element	9	1790	1.0	4.5	2.8	2.4	1822	chr3L	11087058	intron	JIL-1 -	chr3L	11087969	intron	JIL-1 -	chr3L	11088880	intron	JIL-1 -	chr3L_9_11085001	chr3L_11085001	W2
1428	chr3L	11264461	11264496	chr3L	11271414	11271449	17.6	19	6953	4.5	3.0	3.8	4.0	6988	chr3L	11264461	intergenic	not near genes	chr3L	11267955	intergenic	not near genes	chr3L	11271449	intergenic	not near genes	chr3L_19_11265001	chr3L_11265001	W2
1431	chr3L	11329688	11329723	chr3L	11332894	11332929	jockey	17	3206	5.0	4.5	4.8	2.9	3241	chr3L	11329688	intergenic	not near genes	chr3L	11331308	intergenic	not near genes	chr3L	11332929	intergenic	not near genes	chr3L_17_11330001	chr3L_11330001	W2
1439	chr3L	11564794	11564811	chr3L	11572420	11572437	412	8	7626	7.0	10.5	8.8	0.8	7643	chr3L	11564794	exon	CG33267 +	chr3L	11568616	intron	CG33267 +	chr3L	11572437	exon	CG33267 +	chr3L_8_11565001	chr3L_11565001	W2
1443	chr3L	11723082	11723116	chr3L	11727878	11727912	Doc	13	4796	2.5	7.5	5.0	2.2	4830	chr3L	11723082	3` UTR	Bmcp +	chr3L	11725497	intron	Bmcp +	chr3L	11727912	3` UTR	Bmcp +	chr3L_13_11725001	chr3L_11725001	W2
1456	chr3L	11864552	11864582	chr3L	11865848	11865878	pogo	22	1296	4.0	6.5	5.2	3.5	1326	chr3L	11864552	intron	CG44837 -	chr3L	11865215	intron	CG44837 -	chr3L	11865878	intron	CG44837 -	chr3L_22_11865001	chr3L_11865001	W2
1488	chr3L	12874926	12874959	chr3L	12877219	12877252	jockey	11	2293	0.5	4.5	2.5	3.1	2326	chr3L	12874926	intergenic	not near genes	chr3L	12876089	intergenic	not near genes	chr3L	12877252	intergenic	not near genes	chr3L_11_12875001	chr3L_12875001	W2
1490	chr3L	12919274	12919305	chr3L	12924748	12924778	Rt1c	15	5474	8.5	6.0	7.2	1.8	5504	chr3L	12919274	intergenic	not near genes	chr3L	12922026	intergenic	not near genes	chr3L	12924778	intergenic	not near genes	chr3L_15_12920001	chr3L_12920001	W2
1491	chr3L	12957787	12957817	chr3L	12962270	12962300	copia	14	4483	5.0	5.0	5.0	2.3	4513	chr3L	12957787	intergenic	not near genes	chr3L	12960044	intergenic	not near genes	chr3L	12962300	intergenic	not near genes	chr3L_14_12960001	chr3L_12960001	W2
1509	chr3L	13525161	13525186	chr3L	13532958	13532977	roo	10	7796	2.5	6.5	4.5	1.8	7816	chr3L	13525161	intergenic	not near genes	chr3L	13529069	intergenic	not near genes	chr3L	13532977	intergenic	not near genes	chr3L_10_13525001	chr3L_13525001	W2
1517	chr3L	13804543	13804576	chr3L	13822830	13822863	roo	19	18287	4.0	6.5	5.2	3.1	18320	chr3L	13804543	intergenic	not near genes	chr3L	13813703	intergenic	not near genes	chr3L	13822863	intergenic	not near genes	chr3L_19_13810001	chr3L_13810001	W2
1533	chr3L	14245565	14245593	chr3L	14245660	14245688	1360	15	95	6.0	3.0	4.5	2.7	123	chr3L	14245565	3` UTR	CR44561 -	chr3L	14245626	3` UTR	CR44561 -	chr3L	14245688	3` UTR	CR44561 -	chr3L_15_14245001	chr3L_14245001	W2
1534	chr3L	14267376	14267391	chr3L	14271817	14271832	F-element	7	4441	5.0	3.0	4.0	1.4	4456	chr3L	14267376	intergenic	not near genes	chr3L	14269604	intergenic	not near genes	chr3L	14271832	intergenic	not near genes	chr3L_7_14265001	chr3L_14265001	W2
1538	chr3L	14295980	14296016	chr3L	14296467	14296503	roo	16	487	9.0	6.0	7.5	1.9	523	chr3L	14295980	intron	fz +	chr3L	14296242	intron	fz +	chr3L	14296503	intron	fz +	chr3L_16_14295001	chr3L_14295001	W2
1539	chr3L	14312027	14312058	chr3L	14316835	14316873	X-element	15	4814	3.5	2.5	3.0	3.8	4846	chr3L	14312027	exon	fz +	chr3L	14314450	intron	fz +	chr3L	14316873	intron	fz +	chr3L_15_14310001	chr3L_14310001	W2
1542	chr3L	14468450	14468476	chr3L	14473657	14473683	copia	9	5207	2.0	3.5	2.8	2.4	5233	chr3L	14468450	intron	bbg -	chr3L	14471066	intron	bbg -	chr3L	14473683	intron	bbg -	chr3L_9_14470001	chr3L_14470001	W2
1549	chr3L	14721184	14721210	chr3L	14723028	14723054	Rt1c	13	1844	6.5	8.5	7.5	1.5	1870	chr3L	14721184	intron	ome +	chr3L	14722119	intron	ome +	chr3L	14723054	intron	ome +	chr3L_13_14720001	chr3L_14720001	W2
1551	chr3L	14725600	14725623	chr3L	14728595	14728618	Doc	6	2995	1.5	5.0	3.2	1.4	3018	chr3L	14725600	intron	ome +	chr3L	14727109	intron	ome +	chr3L	14728618	intron	ome +	chr3L_6_14725001	chr3L_14725001	W2
1561	chr3L	15085046	15085085	chr3L	15086213	15086252	1360	7	1167	4.5	4.5	4.5	1.3	1206	chr3L	15085046	intron	cp309 -	chr3L	15085649	intron	cp309 -	chr3L	15086252	intron	cp309 -	chr3L_7_15085001	chr3L_15085001	W2
1567	chr3L	15295765	15295798	chr3L	15298609	15298642	gypsy5	13	2844	3.5	6.0	4.8	2.2	2877	chr3L	15295765	intergenic	not near genes	chr3L	15297204	intergenic	not near genes	chr3L	15298642	intergenic	Best4 +	chr3L_13_15295001	chr3L_15295001	W2
1574	chr3L	15423758	15423781	chr3L	15426603	15426626	opus	11	2845	7.0	4.5	5.8	1.6	2868	chr3L	15423758	intergenic	not near genes	chr3L	15425192	intergenic	not near genes	chr3L	15426626	intergenic	not near genes	chr3L_11_15425001	chr3L_15425001	W2
1579	chr3L	15554919	15554934	chr3L	15556707	15556722	S-element	6	1788	9.0	11.5	10.2	0.5	1803	chr3L	15554919	intron	AGO2 +	chr3L	15555820	intron	AGO2 +	chr3L	15556722	intron	AGO2 +	chr3L_6_15555001	chr3L_15555001	W2
1591	chr3L	15899222	15899261	chr3L	15899790	15899828	jockey	15	568	3.5	6.0	4.8	2.6	606	chr3L	15899222	intergenic	pHCl -	chr3L	15899525	intergenic	pHCl -	chr3L	15899828	intergenic	sff -	chr3L_15_15895001	chr3L_15895001	W2
1594	chr3L	15929199	15929230	chr3L	15938347	15938378	roo	9	9148	2.0	8.5	5.2	1.5	9179	chr3L	15929199	intron	Pka-C3 -	chr3L	15933788	intron	Pka-C3 -	chr3L	15938378	intron	Pka-C3 -	chr3L_9_15930001	chr3L_15930001	W2
1601	chr3L	16184102	16184136	chr3L	16188922	16188956	X-element	9	4820	2.0	6.5	4.2	1.7	4854	chr3L	16184102	intergenic	not near genes	chr3L	16186529	intergenic	not near genes	chr3L	16188956	intergenic	not near genes	chr3L_9_16185001	chr3L_16185001	W2
1612	chr3L	16443847	16443874	chr3L	16446188	16446215	Doc	11	2341	4.5	5.0	4.8	1.9	2368	chr3L	16443847	intron,intron	CG33158 +,dsx-c73A -	chr3L	16445031	intron,intron	CG33158 +,dsx-c73A -	chr3L	16446215	intron,intron	CG33158 +,dsx-c73A -	chr3L_11_16445001	chr3L_16445001	W2
1613	chr3L	16493974	16494008	chr3L	16494492	16494526	jockey	12	518	6.0	5.5	5.8	1.8	552	chr3L	16493974	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L	16494250	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L	16494526	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L_12_16490001	chr3L_16490001	W2
1619	chr3L	16616508	16616543	chr3L	16621837	16621870	297	18	5329	3.0	7.0	5.0	3.0	5362	chr3L	16616508	3` UTR	Abl -	chr3L	16619189	3` UTR	Abl -	chr3L	16621870	3` UTR	Abl -	chr3L_18_16615001	chr3L_16615001	W2
1622	chr3L	16684021	16684052	chr3L	16689243	16689274	copia	8	5222	2.0	1.5	1.8	2.9	5253	chr3L	16684021	intron,intron	Lasp -,CG43954 -	chr3L	16686648	intron,intron	Lasp -,CG43954 -	chr3L	16689274	intron,intron,5` UTR	Lasp -,CG43954 -,CR45179 +	chr3L_8_16685001	chr3L_16685001	W2
1636	chr3L	16945724	16945761	chr3L	16954878	16954915	roo	22	9154	6.0	2.0	4.0	4.4	9191	chr3L	16945724	exon	Obp73a +	chr3L	16950320	intergenic	not near genes	chr3L	16954915	5` UTR	Nc73EF +	chr3L_22_16950001	chr3L_16950001	W2
1642	chr3L	17034940	17034969	chr3L	17035128	17035158	G2	6	189	5.0	3.0	4.0	1.2	218	chr3L	17034940	intergenic	not near genes	chr3L	17035049	intergenic	not near genes	chr3L	17035158	intergenic	not near genes	chr3L_6_17035001	chr3L_17035001	W2
1644	chr3L	17085002	17085033	chr3L	17094152	17094183	roo	16	9150	7.5	4.5	6.0	2.3	9181	chr3L	17085002	intron	Rbp6 -	chr3L	17089592	intron	Rbp6 -	chr3L	17094183	intron	Rbp6 -	chr3L_16_17085001	chr3L_17085001	W2
1656	chr3L	17516980	17517013	chr3L	17524539	17524572	412	16	7559	5.5	7.5	6.5	2.1	7592	chr3L	17516980	intron	CG7564 +	chr3L	17520776	intron	CG7564 +	chr3L	17524572	3` UTR	CG7564 +	chr3L_16_17520001	chr3L_17520001	W2
1662	chr3L	17730847	17730882	chr3L	17738178	17738213	mdg1	8	7331	4.0	3.0	3.5	1.8	7366	chr3L	17730847	intron	Ccn +	chr3L	17734530	intron	Ccn +	chr3L	17738213	intron	Ccn +	chr3L_8_17730001	chr3L_17730001	W2
1666	chr3L	17799810	17799837	chr3L	17801598	17801625	S-element	7	1788	3.5	3.5	3.5	1.6	1815	chr3L	17799810	intron	NUCB1 -	chr3L	17800718	intron	NUCB1 -	chr3L	17801625	intron	NUCB1 -	chr3L_7_17800001	chr3L_17800001	W2
1669	chr3L	17918369	17918405	chr3L	17921173	17921209	opus	12	2803	4.0	4.0	4.0	2.4	2840	chr3L	17918369	intergenic	not near genes	chr3L	17919789	intergenic	not near genes	chr3L	17921209	intergenic	not near genes	chr3L_12_17915001	chr3L_17915001	W2
1675	chr3L	18047704	18047741	chr3L	18056762	18056799	roo	22	9058	2.5	2.5	2.5	6.3	9095	chr3L	18047704	intron	Eip75B -	chr3L	18052252	intron	Eip75B -	chr3L	18056799	intron	Eip75B -	chr3L_22_18050001	chr3L_18050001	W2
1694	chr3L	18506130	18506158	chr3L	18509594	18509622	F-element	14	3464	4.5	4.0	4.2	2.7	3492	chr3L	18506130	intergenic	not near genes	chr3L	18507876	intergenic	not near genes	chr3L	18509622	intergenic	not near genes	chr3L_14_18505001	chr3L_18505001	W2
1695	chr3L	18528628	18528661	chr3L	18537790	18537823	roo	17	9162	5.0	3.5	4.2	3.3	9195	chr3L	18528628	intergenic	not near genes	chr3L	18533226	intergenic	not near genes	chr3L	18537823	intergenic	not near genes	chr3L_17_18530001	chr3L_18530001	W2
1696	chr3L	18593948	18593982	chr3L	18595929	18595963	Doc	20	1981	2.5	3.5	3.0	5.0	2015	chr3L	18593948	intergenic	term -	chr3L	18594956	intergenic	not near genes	chr3L	18595963	intergenic	CR45389 +	chr3L_20_18590001	chr3L_18590001	W2
1700	chr3L	18710763	18710792	chr3L	18718716	18718745	Stalker2	14	7953	2.5	3.0	2.8	3.7	7982	chr3L	18710763	intergenic	not near genes	chr3L	18714754	intergenic	not near genes	chr3L	18718745	intergenic	not near genes	chr3L_14_18710001	chr3L_18710001	W2
1703	chr3L	18772409	18772442	chr3L	18781091	18781124	roo	12	8682	3.0	4.0	3.5	2.7	8715	chr3L	18772409	intron	ftz-f1 -	chr3L	18776766	intron	ftz-f1 -	chr3L	18781124	intron	ftz-f1 -	chr3L_12_18775001	chr3L_18775001	W2
1706	chr3L	18833776	18833805	chr3L	18834941	18834970	1360	4	1165	11.5	11.5	11.5	0.3	1194	chr3L	18833776	intron	Indy -	chr3L	18834373	intron	Indy -	chr3L	18834970	intron	Indy -	chr3L_4_18830001	chr3L_18830001	W2
1717	chr3L	19008836	19008872	chr3L	19009176	19009211	jockey	13	339	5.0	3.0	4.0	2.6	375	chr3L	19008836	intron	nkd -	chr3L	19009024	intron	nkd -	chr3L	19009211	intron	nkd -	chr3L_13_19005001	chr3L_19005001	W2
1721	chr3L	19115637	19115670	chr3L	19115818	19115849	BS	18	180	4.5	4.5	4.5	3.3	212	chr3L	19115637	intron	CG14082 -	chr3L	19115743	intron	CG14082 -	chr3L	19115849	intron	CG14082 -	chr3L_18_19115001	chr3L_19115001	W2
1722	chr3L	19117040	19117076	chr3L	19124488	19124524	mdg1	15	7448	7.5	6.5	7.0	1.9	7484	chr3L	19117040	intron	CG14082 -	chr3L	19120782	intron	CG14082 -	chr3L	19124524	intron	CG14082 -	chr3L_15_19120001	chr3L_19120001	W2
1727	chr3L	19208057	19208090	chr3L	19209432	19209465	Doc	17	1375	2.0	5.0	3.5	3.8	1408	chr3L	19208057	intron	fz2 -	chr3L	19208761	intron	fz2 -	chr3L	19209465	intron	fz2 -	chr3L_17_19205001	chr3L_19205001	W2
1748	chr3L	19820301	19820319	chr3L	19827851	19827869	412	8	7550	5.5	4.5	5.0	1.3	7568	chr3L	19820301	intron	Deaf1 +	chr3L	19824085	intron	Deaf1 +	chr3L	19827869	intron	Deaf1 +	chr3L_8_19820001	chr3L_19820001	W2
1749	chr3L	19848502	19848532	chr3L	19857693	19857723	roo	9	9191	6.5	7.0	6.8	1.2	9221	chr3L	19848502	intron	Papss +	chr3L	19853112	intron	Papss +	chr3L	19857723	intron	Papss +	chr3L_9_19850001	chr3L_19850001	W2
1750	chr3L	19861821	19861853	chr3L	19863610	19863642	S-element	16	1789	3.0	4.5	3.8	3.3	1821	chr3L	19861821	5` UTR	CR45433 +	chr3L	19862732	intergenic	not near genes	chr3L	19863642	intergenic	not near genes	chr3L_16_19860001	chr3L_19860001	W2
1756	chr3L	20113657	20113690	chr3L	20122915	20122948	roo	17	9258	0.5	4.0	2.2	5.3	9291	chr3L	20113657	intergenic	not near genes	chr3L	20118302	intergenic	not near genes	chr3L	20122948	intergenic	not near genes	chr3L_17_20115001	chr3L_20115001	W2
1764	chr3L	20257340	20257360	chr3L	20258461	20258481	pogo	9	1121	6.0	10.5	8.2	1.0	1141	chr3L	20257340	intron	rdgC +	chr3L	20257910	intron	rdgC +	chr3L	20258481	intron	rdgC +	chr3L_9_20255001	chr3L_20255001	W2
1770	chr3L	20476751	20476775	chr3L	20484351	20484375	springer	8	7600	9.0	6.5	7.8	0.9	7624	chr3L	20476751	3` UTR	isoQC +	chr3L	20480563	intergenic	not near genes	chr3L	20484375	3` UTR	ZnT77C -	chr3L_8_20480001	chr3L_20480001	W2
1772	chr3L	20590061	20590096	chr3L	20590601	20590636	412	17	540	5.5	5.5	5.5	2.6	575	chr3L	20590061	intergenic	not near genes	chr3L	20590348	intergenic	not near genes	chr3L	20590636	intergenic	not near genes	chr3L_17_20590001	chr3L_20590001	W2
1779	chr3L	21014914	21014948	chr3L	21023396	21023430	Tirant	15	8482	3.5	4.0	3.8	3.1	8516	chr3L	21014914	intron	skd -	chr3L	21019172	intron	skd -	chr3L	21023430	intron	skd -	chr3L_15_21015001	chr3L_21015001	W2
1784	chr3L	21151862	21151889	chr3L	21156947	21156973	flea	15	5085	4.5	4.0	4.2	2.9	5111	chr3L	21151862	intron	Ac78C -	chr3L	21154418	intron	Ac78C -	chr3L	21156973	intron	Ac78C -	chr3L_15_21150001	chr3L_21150001	W2
1787	chr3L	21243745	21243767	chr3L	21251309	21251331	412	10	7564	7.5	5.0	6.2	1.4	7586	chr3L	21243745	intron	Eip78C +	chr3L	21247538	intron	Eip78C +	chr3L	21251331	intron	Eip78C +	chr3L_10_21245001	chr3L_21245001	W2
1789	chr3L	21306144	21306180	chr3L	21315304	21315340	roo	11	9160	8.0	3.5	5.8	1.6	9196	chr3L	21306144	3` UTR,3` UTR	CG7632 +,Pc -	chr3L	21310742	intron	Pc -	chr3L	21315340	3` UTR	Pc -	chr3L_11_21310001	chr3L_21310001	W2
1791	chr3L	21372720	21372747	chr3L	21379229	21379256	McClintock	12	6509	3.0	5.5	4.2	2.3	6536	chr3L	21372720	intergenic	not near genes	chr3L	21375988	intergenic	not near genes	chr3L	21379256	intergenic	not near genes	chr3L_12_21375001	chr3L_21375001	W2
1794	chr3L	21498831	21498869	chr3L	21500468	21500506	1360	18	1636	6.0	5.0	5.5	2.8	1675	chr3L	21498831	intron	Glg1 -	chr3L	21499668	intron	Glg1 -	chr3L	21500506	intron	Glg1 -	chr3L_18_21495001	chr3L_21495001	W2
1795	chr3L	21501170	21501172	chr3L	21501265	21501267	1360	4	95	5.5	10.0	7.8	0.5	97	chr3L	21501170	intron	Glg1 -	chr3L	21501218	intron	Glg1 -	chr3L	21501267	intron	Glg1 -	chr3L_4_21500001	chr3L_21500001	W2
1798	chr3L	21749315	21749342	chr3L	21754476	21754503	Doc	13	5161	4.5	7.5	6.0	1.9	5188	chr3L	21749315	intron	Syn1 -	chr3L	21751909	intron	Syn1 -	chr3L	21754503	intron	Syn1 -	chr3L_13_21750001	chr3L_21750001	W2
1811	chr3L	22099678	22099707	chr3L	22105865	22105894	3S18	12	6187	5.5	8.0	6.8	1.5	6216	chr3L	22099678	intergenic	not near genes	chr3L	22102786	intergenic	not near genes	chr3L	22105894	intergenic	not near genes	chr3L_12_22100001	chr3L_22100001	W2
1823	chr3L	22555776	22555802	chr3L	22563246	22563273	blood	12	7471	4.5	7.0	5.8	1.8	7497	chr3L	22555776	intergenic	not near genes	chr3L	22559524	intergenic	not near genes	chr3L	22563273	intergenic	not near genes	chr3L_12_22555001	chr3L_22555001	W2
1825	chr3L	22577620	22577647	chr3L	22582409	22582436	Doc	14	4789	5.0	3.0	4.0	2.8	4816	chr3L	22577620	intergenic	not near genes	chr3L	22580028	intergenic	not near genes	chr3L	22582436	3` UTR	CG14459 -	chr3L_14_22580001	chr3L_22580001	W2
1826	chr3L	22617190	22617222	chr3L	22624642	22624675	blood	12	7453	5.0	8.0	6.5	1.6	7485	chr3L	22617190	intron	CG14459 -	chr3L	22620932	intron	CG14459 -	chr3L	22624675	intron	CG14459 -	chr3L_12_22620001	chr3L_22620001	W2
1832	chr3L	22761384	22761420	chr3L	22766819	22766855	Ivk	15	5435	4.0	3.0	3.5	3.3	5471	chr3L	22761384	intron	SPoCk +	chr3L	22764120	intron	SPoCk +	chr3L	22766855	intron	SPoCk +	chr3L_15_22760001	chr3L_22760001	W2
1834	chr3L	22865980	22866014	chr3L	22867114	22867148	Doc	20	1134	5.0	4.5	4.8	3.4	1168	chr3L	22865980	intron	CG33170 +	chr3L	22866564	intron	CG33170 +	chr3L	22867148	intron	CG33170 +	chr3L_20_22865001	chr3L_22865001	W2
1843	chr3L	22989870	22989895	chr3L	22996844	22996870	297	10	6975	6.0	6.0	6.0	1.4	7000	chr3L	22989870	intergenic	not near genes	chr3L	22993370	intergenic	not near genes	chr3L	22996870	intergenic	not near genes	chr3L_10_22990001	chr3L_22990001	W2
1852	chr3L	24021288	24021312	chr3L	24022446	24022470	1360	6	1158	11.0	12.5	11.8	0.5	1182	chr3L	24021288	intergenic	not near genes	chr3L	24021879	intergenic	not near genes	chr3L	24022470	intergenic	not near genes	chr3L_6_24020001	chr3L_24020001	W2
1854	chr3L	24168785	24168821	chr3L	24176114	24176150	ZAM	14	7328	2.5	4.0	3.2	3.3	7365	chr3L	24168785	intron	Snap25 +	chr3L	24172468	intron	Snap25 +	chr3L	24176150	intron	Snap25 +	chr3L_14_24170001	chr3L_24170001	W2
1860	chr3L	24791894	24791924	chr3L	24796674	24796704	Doc	12	4780	5.0	6.5	5.8	1.8	4810	chr3L	24791894	intergenic	not near genes	chr3L	24794299	intergenic	not near genes	chr3L	24796704	intergenic	not near genes	chr3L_12_24790001	chr3L_24790001	W2
1866	chr3L	25628497	25628529	chr3L	25633269	25633301	F-element	14	4772	14.5	7.5	11.0	1.2	4804	chr3L	25628497	intron	CG41343 -	chr3L	25630899	intron	CG41343 -	chr3L	25633301	intron	CG41343 -	chr3L_14_25630001	chr3L_25630001	W2
1872	chr3L	27727641	27727653	chr3L	27728749	27728761	G-element	4	1108	7.5	12.0	9.8	0.4	1120	chr3L	27727641	intergenic	not near genes	chr3L	27728201	intergenic	not near genes	chr3L	27728761	intergenic	not near genes	chr3L_4_27725001	chr3L_27725001	W2
1873	chr3L	27980723	27980726	chr3L	27985522	27985525	Doc	4	4799	8.5	6.0	7.2	0.5	4802	chr3L	27980723	intron	CG17514 -	chr3L	27983124	intron	CG17514 -	chr3L	27985525	intron	CG17514 -	chr3L_4_27980001	chr3L_27980001	W2
1877	chr3R	1867170	1867174	chr3R	1954916	1954926	Doc3-element	4	87750	10.0	9.5	9.8	0.4	87756	chr3R	1867170	intron	CG42623 +	chr3R	1911048	intron	CG42623 +	chr3R	1954926	intergenic	not near genes	chr3R_4_1910001	chr3R_1910001	W2
1887	chr3R	4105039	4105062	chr3R	4110244	4110267	copia	6	5205	3.5	6.0	4.8	1.0	5228	chr3R	4105039	intergenic	not near genes	chr3R	4107653	intergenic	not near genes	chr3R	4110267	intergenic	not near genes	chr3R_6_4105001	chr3R_4105001	W2
1888	chr3R	4366767	4366781	chr3R	4375151	4375165	roo	11	8384	5.5	7.0	6.2	1.5	8398	chr3R	4366767	3` UTR	CG1090 +	chr3R	4370966	intergenic	not near genes	chr3R	4375165	5` UTR	CR44922 +	chr3R_11_4370001	chr3R_4370001	W2
1890	chr3R	4408404	4408442	chr3R	4412709	4412747	Juan	13	4305	6.5	9.0	7.8	1.5	4343	chr3R	4408404	intron	CG32944 -	chr3R	4410576	intron	CG32944 -	chr3R	4412747	intron	CG32944 -	chr3R_13_4410001	chr3R_4410001	W2
1892	chr3R	4538900	4538912	chr3R	4540161	4540173	1360	5	1261	2.0	7.5	4.8	0.9	1273	chr3R	4538900	intron	CG34357 -	chr3R	4539536	intron	CG34357 -	chr3R	4540173	intron	CG34357 -	chr3R_5_4535001	chr3R_4535001	W2
1894	chr3R	4609544	4609581	chr3R	4610709	4610746	1360	12	1165	5.0	3.0	4.0	2.4	1202	chr3R	4609544	intergenic	not near genes	chr3R	4610145	intergenic	not near genes	chr3R	4610746	intergenic	not near genes	chr3R_12_4610001	chr3R_4610001	W2
1897	chr3R	4753237	4753273	chr3R	4757541	4757577	F-element	10	4304	6.5	6.5	6.5	1.3	4340	chr3R	4753237	intron,intron	atms +,CG44098 -	chr3R	4755407	intron,intron	atms +,CG44098 -	chr3R	4757577	intron,exon	atms +,CG44098 -	chr3R_10_4755001	chr3R_4755001	W2
1900	chr3R	4887481	4887503	chr3R	4894859	4894880	rover	9	7378	4.0	5.5	4.8	1.6	7399	chr3R	4887481	intergenic	not near genes	chr3R	4891180	intergenic	not near genes	chr3R	4894880	intergenic	not near genes	chr3R_9_4890001	chr3R_4890001	W2
1906	chr3R	5045845	5045858	chr3R	5052948	5052961	HMS-Beagle	4	7103	6.5	4.0	5.2	0.6	7116	chr3R	5045845	intron	CR43635 -	chr3R	5049403	intergenic	not near genes	chr3R	5052961	intergenic	CR45588 -	chr3R_4_5045001	chr3R_5045001	W2
1907	chr3R	5067978	5068012	chr3R	5073496	5073530	mdg3	12	5518	6.0	4.5	5.2	1.9	5552	chr3R	5067978	intergenic	not near genes	chr3R	5070754	intergenic	not near genes	chr3R	5073530	intergenic	not near genes	chr3R_12_5070001	chr3R_5070001	W2
1917	chr3R	5445958	5445993	chr3R	5452419	5452454	Burdock	10	6461	2.5	2.0	2.2	3.1	6496	chr3R	5445958	intron	CG14669 +	chr3R	5449206	intron	CG14669 +	chr3R	5452454	intron	CG14669 +	chr3R_10_5445001	chr3R_5445001	W2
1923	chr3R	5746015	5746046	chr3R	5746257	5746288	pogo	13	242	8.5	3.5	6.0	1.9	273	chr3R	5746015	3` UTR	Madm +	chr3R	5746152	3` UTR	Madm +	chr3R	5746288	3` UTR	Madm +	chr3R_13_5745001	chr3R_5745001	W2
1924	chr3R	5747009	5747047	chr3R	5753201	5753237	diver	16	6192	3.5	7.0	5.2	2.6	6228	chr3R	5747009	intergenic	Madm +	chr3R	5750123	intergenic	not near genes	chr3R	5753237	intergenic	CG2091 -	chr3R_16_5750001	chr3R_5750001	W2
1926	chr3R	5809115	5809145	chr3R	5809357	5809387	pogo	11	242	2.5	3.5	3.0	2.8	272	chr3R	5809115	3` UTR	CG11000 +	chr3R	5809251	3` UTR	CG11000 +	chr3R	5809387	3` UTR	CG11000 +	chr3R_11_5805001	chr3R_5805001	W2
1928	chr3R	5927565	5927586	chr3R	5927800	5927827	pogo	13	241	5.0	4.5	4.8	2.2	262	chr3R	5927565	intron	CG34113 -	chr3R	5927696	intron	CG34113 -	chr3R	5927827	intron	CG34113 -	chr3R_13_5925001	chr3R_5925001	W2
1933	chr3R	6015959	6015995	chr3R	6024441	6024477	Tirant	16	8482	4.5	2.5	3.5	3.6	8518	chr3R	6015959	intergenic	not near genes	chr3R	6020218	intergenic	not near genes	chr3R	6024477	intergenic	not near genes	chr3R_16_6020001	chr3R_6020001	W2
1934	chr3R	6121164	6121187	chr3R	6121383	6121406	BS	14	219	0.0	5.0	2.5	4.0	242	chr3R	6121164	intergenic	not near genes	chr3R	6121285	intergenic	not near genes	chr3R	6121406	intergenic	not near genes	chr3R_14_6120001	chr3R_6120001	W2
1935	chr3R	6158507	6158541	chr3R	6167091	6167125	Tirant	11	8584	6.0	2.5	4.2	2.1	8618	chr3R	6158507	intergenic	not near genes	chr3R	6162816	intergenic	not near genes	chr3R	6167125	intergenic	CG1077 +	chr3R_11_6160001	chr3R_6160001	W2
1936	chr3R	6175173	6175207	chr3R	6182446	6182480	HMS-Beagle2	16	7273	1.0	6.0	3.5	3.6	7307	chr3R	6175173	intergenic	Osi1 +	chr3R	6178826	intron	CR45194 +	chr3R	6182480	intergenic	CR45194 +	chr3R_16_6175001	chr3R_6175001	W2
1938	chr3R	6206283	6206310	chr3R	6206501	6206528	BS	10	218	4.0	5.0	4.5	1.8	245	chr3R	6206283	exon	Osi24 +	chr3R	6206406	intron	Osi24 +	chr3R	6206528	intron	Osi24 +	chr3R_10_6205001	chr3R_6205001	W2
1943	chr3R	6510022	6510055	chr3R	6515104	6515137	jockey	12	5082	4.5	2.0	3.2	2.9	5115	chr3R	6510022	intergenic	not near genes	chr3R	6512580	intergenic	not near genes	chr3R	6515137	intergenic	not near genes	chr3R_12_6510001	chr3R_6510001	W2
1947	chr3R	6737496	6737531	chr3R	6739284	6739319	Doc	14	1788	5.5	4.5	5.0	2.3	1823	chr3R	6737496	intron	pb -	chr3R	6738408	intron	pb -	chr3R	6739319	intron	pb -	chr3R_14_6735001	chr3R_6735001	W2
1973	chr3R	7694575	7694607	chr3R	7713637	7713669	invader3	12	19062	3.0	5.0	4.0	2.4	19094	chr3R	7694575	3` UTR	Nlg1 +	chr3R	7704122	intergenic	not near genes	chr3R	7713669	intergenic	not near genes	chr3R_12_7700001	chr3R_7700001	W2
1974	chr3R	7729464	7729496	chr3R	7737403	7737435	Stalker2	15	7939	6.0	7.0	6.5	2.0	7971	chr3R	7729464	intergenic	not near genes	chr3R	7733450	intergenic	not near genes	chr3R	7737435	intergenic	not near genes	chr3R_15_7730001	chr3R_7730001	W2
1978	chr3R	7849645	7849674	chr3R	7850813	7850842	1360	14	1167	3.0	5.0	4.0	2.8	1197	chr3R	7849645	intron	CG34384 +	chr3R	7850244	intron	CG34384 +	chr3R	7850842	intron	CG34384 +	chr3R_14_7850001	chr3R_7850001	W2
1981	chr3R	8094407	8094441	chr3R	8099713	8099747	Transpac	16	5306	8.0	6.5	7.2	2.0	5340	chr3R	8094407	intron	CG7900 +	chr3R	8097077	intron	CG7900 +	chr3R	8099747	intron	CG7900 +	chr3R_16_8095001	chr3R_8095001	W2
1982	chr3R	8101761	8101793	chr3R	8104846	8104878	G2	12	3085	4.0	4.5	4.2	2.3	3117	chr3R	8101761	exon	CG7900 +	chr3R	8103320	intron	CG7900 +	chr3R	8104878	3` UTR	CG7900 +	chr3R_12_8100001	chr3R_8100001	W2
1985	chr3R	8207553	8207590	chr3R	8208399	8208436	F-element	11	845	1.5	3.5	2.5	3.1	883	chr3R	8207553	intergenic	not near genes	chr3R	8207994	intergenic	not near genes	chr3R	8208436	intergenic	not near genes	chr3R_11_8205001	chr3R_8205001	W2
1988	chr3R	8403004	8403041	chr3R	8412171	8412208	roo	24	9166	4.5	6.5	5.5	3.7	9204	chr3R	8403004	intron	CG45263 -	chr3R	8407606	intron	CG45263 -	chr3R	8412208	intron	CG45263 -	chr3R_24_8405001	chr3R_8405001	W2
1991	chr3R	8570478	8570511	chr3R	8575115	8575148	HMS-Beagle	15	4637	4.5	4.5	4.5	2.7	4670	chr3R	8570478	intergenic	not near genes	chr3R	8572813	intergenic	not near genes	chr3R	8575148	intergenic	not near genes	chr3R_15_8570001	chr3R_8570001	W2
1992	chr3R	8601771	8601800	chr3R	8610925	8610954	roo	8	9154	7.5	6.0	6.8	1.0	9183	chr3R	8601771	intron	5-HT2B +	chr3R	8606362	intron	5-HT2B +	chr3R	8610954	intron	5-HT2B +	chr3R_8_8605001	chr3R_8605001	W2
1998	chr3R	8707359	8707385	chr3R	8709801	8709827	jockey	12	2442	6.5	6.0	6.2	1.7	2468	chr3R	8707359	intergenic	not near genes	chr3R	8708593	intergenic	not near genes	chr3R	8709827	intergenic	not near genes	chr3R_12_8705001	chr3R_8705001	W2
2006	chr3R	9304526	9304533	chr3R	9311814	9311821	Stalker4	6	7288	12.5	2.5	7.5	0.7	7295	chr3R	9304526	intron	CG8861 -	chr3R	9308174	intron	CG8861 -	chr3R	9311821	intron	CG8861 -	chr3R_6_9305001	chr3R_9305001	W2
2007	chr3R	9319573	9319609	chr3R	9320009	9320045	jockey	20	436	2.0	6.5	4.2	3.8	472	chr3R	9319573	intron	CG8861 -	chr3R	9319809	intron	CG8861 -	chr3R	9320045	intron	CG8861 -	chr3R_20_9315001	chr3R_9315001	W2
2008	chr3R	9361815	9361845	chr3R	9362057	9362087	pogo	9	242	4.0	5.5	4.8	1.6	272	chr3R	9361815	3` UTR	CG45050 +	chr3R	9361951	3` UTR	CG45050 +	chr3R	9362087	3` UTR	CG45050 +	chr3R_9_9360001	chr3R_9360001	W2
2030	chr3R	10231780	10231813	chr3R	10237358	10237391	mdg3	13	5578	9.0	4.5	6.8	1.7	5611	chr3R	10231780	intron	CG42795 +	chr3R	10234586	intron	CG42795 +	chr3R	10237391	intron	CG42795 +	chr3R_13_10230001	chr3R_10230001	W2
2031	chr3R	10255380	10255386	chr3R	10260821	10260827	I-element	4	5441	10.5	6.0	8.2	0.4	5447	chr3R	10255380	exon	Sirt6 -	chr3R	10258104	intron	Sirt6 -	chr3R	10260827	exon	Sirt6 -	chr3R_4_10255001	chr3R_10255001	W2
2044	chr3R	10804170	10804207	chr3R	10811703	10811740	17.6	20	7533	4.5	5.0	4.8	3.4	7570	chr3R	10804170	intergenic	CG14692 -	chr3R	10807955	intergenic	not near genes	chr3R	10811740	3` UTR	CG14693 -	chr3R_20_10805001	chr3R_10805001	W2
2049	chr3R	11379233	11379263	chr3R	11388389	11388419	roo	15	9156	6.5	2.0	4.2	2.9	9186	chr3R	11379233	intron	pros +	chr3R	11383826	intron	pros +	chr3R	11388419	intron	pros +	chr3R_15_11380001	chr3R_11380001	W2
2054	chr3R	11841058	11841097	chr3R	11846250	11846289	BS	19	5191	4.0	5.0	4.5	3.5	5231	chr3R	11841058	intron	CG6959 -	chr3R	11843674	intron	CG6959 -	chr3R	11846289	intron	CG6959 -	chr3R_19_11840001	chr3R_11840001	W2
2055	chr3R	11957854	11957879	chr3R	11958138	11958163	S-element	10	284	2.5	0.0	1.2	4.5	309	chr3R	11957854	intergenic	not near genes	chr3R	11958008	intergenic	not near genes	chr3R	11958163	intergenic	not near genes	chr3R_10_11955001	chr3R_11955001	W2
2082	chr3R	12920151	12920184	chr3R	12925355	12925372	copia	13	5203	4.5	5.5	5.0	2.2	5221	chr3R	12920151	intron	beat-Vb +	chr3R	12922762	intron	beat-Vb +	chr3R	12925372	intron	beat-Vb +	chr3R_13_12920001	chr3R_12920001	W2
2090	chr3R	13135826	13135859	chr3R	13138002	13138035	pogo	10	2176	7.0	2.5	4.8	1.7	2209	chr3R	13135826	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13136930	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13138035	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R_10_13135001	chr3R_13135001	W2
2091	chr3R	13143042	13143060	chr3R	13148619	13148637	mdg3	9	5577	6.5	10.5	8.5	0.9	5595	chr3R	13143042	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13145840	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13148637	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R_9_13145001	chr3R_13145001	W2
2098	chr3R	13314112	13314129	chr3R	13318885	13318918	Doc	6	4786	2.0	2.0	2.0	2.0	4806	chr3R	13314112	intergenic	not near genes	chr3R	13316515	intergenic	not near genes	chr3R	13318918	intergenic	CG45080 -	chr3R_6_13315001	chr3R_13315001	W2
2101	chr3R	13517222	13517237	chr3R	13520040	13520044	jockey	4	2815	4.5	0.0	2.2	1.2	2822	chr3R	13517222	intergenic	not near genes	chr3R	13518633	intergenic	not near genes	chr3R	13520044	intergenic	not near genes	chr3R_4_13515001	chr3R_13515001	W2
2119	chr3R	14021646	14021673	chr3R	14023464	14023491	S-element	9	1818	11.5	7.5	9.5	0.9	1845	chr3R	14021646	intron	rdx -	chr3R	14022568	intron	rdx -	chr3R	14023491	intron	rdx -	chr3R_9_14020001	chr3R_14020001	W2
2127	chr3R	14180811	14180842	chr3R	14185577	14185607	F-element	12	4766	4.5	3.5	4.0	2.4	4796	chr3R	14180811	intron	Dop1R1 -	chr3R	14183209	intron	Dop1R1 -	chr3R	14185607	intron	Dop1R1 -	chr3R_12_14180001	chr3R_14180001	W2
2128	chr3R	14194426	14194457	chr3R	14203576	14203607	roo	7	9150	6.5	1.0	3.8	1.5	9181	chr3R	14194426	intron	Dop1R1 -	chr3R	14199016	intron	Dop1R1 -	chr3R	14203607	intron	Dop1R1 -	chr3R_7_14195001	chr3R_14195001	W2
2130	chr3R	14246389	14246408	chr3R	14247886	14247905	jockey	12	1497	9.5	4.5	7.0	1.5	1516	chr3R	14246389	intergenic	not near genes	chr3R	14247147	intergenic	not near genes	chr3R	14247905	intergenic	not near genes	chr3R_12_14245001	chr3R_14245001	W2
2159	chr3R	15041402	15041453	chr3R	15045187	15045222	Doc	7	3771	0.5	5.5	3.0	1.8	3820	chr3R	15041402	intergenic	not near genes	chr3R	15043312	intergenic	not near genes	chr3R	15045222	intergenic	not near genes	chr3R_7_15040001	chr3R_15040001	W2
2160	chr3R	15059277	15059477	chr3R	15059472	15059565	BS	6	124	0.0	0.0	0.0	6.0	288	chr3R	15059277	intron	dpr9 -	chr3R	15059421	intron	dpr9 -	chr3R	15059565	intron	dpr9 -	chr3R_6_15055001	chr3R_15055001	W2
2161	chr3R	15079805	15079839	chr3R	15080047	15080081	pogo	17	242	5.5	1.5	3.5	3.8	276	chr3R	15079805	3` UTR	CG6966 -	chr3R	15079943	3` UTR	CG6966 -	chr3R	15080081	3` UTR	CG6966 -	chr3R_17_15075001	chr3R_15075001	W2
2164	chr3R	15102498	15102530	chr3R	15109754	15109785	412	9	7254	2.5	2.0	2.2	2.8	7287	chr3R	15102498	intron	CG42788 -	chr3R	15106142	intron	CG42788 -	chr3R	15109785	intron	CG42788 -	chr3R_9_15105001	chr3R_15105001	W2
2167	chr3R	15132055	15132084	chr3R	15135116	15135145	Juan	8	3061	5.5	12.5	9.0	0.8	3090	chr3R	15132055	intergenic	CG42788 -	chr3R	15133600	intergenic	not near genes	chr3R	15135145	3` UTR	CG6912 -	chr3R_8_15130001	chr3R_15130001	W2
2171	chr3R	15162539	15162563	chr3R	15167308	15167332	F-element	10	4769	6.0	0.0	3.0	2.5	4793	chr3R	15162539	intron	Gyc88E +	chr3R	15164936	intron	Gyc88E +	chr3R	15167332	intron	Gyc88E +	chr3R_10_15160001	chr3R_15160001	W2
2181	chr3R	15601164	15601196	chr3R	15608687	15608719	412	17	7523	10.0	2.5	6.2	2.4	7555	chr3R	15601164	intergenic	not near genes	chr3R	15604942	intergenic	not near genes	chr3R	15608719	intergenic	not near genes	chr3R_17_15600001	chr3R_15600001	W2
2182	chr3R	15618729	15618764	chr3R	15626204	15626239	blood	10	7475	2.0	2.5	2.2	3.1	7510	chr3R	15618729	intergenic	not near genes	chr3R	15622484	intergenic	not near genes	chr3R	15626239	intergenic	not near genes	chr3R_10_15620001	chr3R_15620001	W2
2193	chr3R	16189408	16189443	chr3R	16189812	16189847	invader4	8	404	13.0	6.5	9.8	0.7	439	chr3R	16189408	intron	sra +	chr3R	16189628	intron	sra +	chr3R	16189847	intron	sra +	chr3R_8_16185001	chr3R_16185001	W2
2208	chr3R	16756316	16756349	chr3R	16762508	16762541	diver	12	6192	2.0	6.5	4.2	2.3	6225	chr3R	16756316	intron	bxd -	chr3R	16759428	intron	bxd -	chr3R	16762541	intron	bxd -	chr3R_12_16755001	chr3R_16755001	W2
2218	chr3R	17294666	17294698	chr3R	17295095	17295127	BS	19	429	3.0	4.5	3.8	4.0	461	chr3R	17294666	intergenic	not near genes	chr3R	17294896	intergenic	not near genes	chr3R	17295127	intergenic	not near genes	chr3R_19_17290001	chr3R_17290001	W2
2222	chr3R	17346690	17346718	chr3R	17348254	17348274	F-element	10	1563	4.5	4.0	4.2	1.9	1584	chr3R	17346690	intron	beat-IIa -	chr3R	17347482	intron	beat-IIa -	chr3R	17348274	intron	beat-IIa -	chr3R_10_17345001	chr3R_17345001	W2
2233	chr3R	17591284	17591319	chr3R	17591721	17591756	F-element	8	437	6.5	7.5	7.0	1.0	472	chr3R	17591284	intergenic	not near genes	chr3R	17591520	intergenic	not near genes	chr3R	17591756	intergenic	not near genes	chr3R_8_17590001	chr3R_17590001	W2
2234	chr3R	17638316	17638351	chr3R	17638803	17638838	roo	16	487	2.5	3.0	2.8	4.2	522	chr3R	17638316	intron	CG43175 +	chr3R	17638577	intron	CG43175 +	chr3R	17638838	intron,intron	CG43175 +,CR45222 +	chr3R_16_17635001	chr3R_17635001	W2
2240	chr3R	17763160	17763165	chr3R	17763647	17763652	roo	4	487	10.0	5.5	7.8	0.5	492	chr3R	17763160	5` UTR	TyrR -	chr3R	17763406	intergenic	TyrR -	chr3R	17763652	intergenic	TyrR -	chr3R_4_17760001	chr3R_17760001	W2
2246	chr3R	17925859	17925885	chr3R	17927327	17927353	hobo	14	1468	5.5	6.5	6.0	2.0	1494	chr3R	17925859	intron	cpo +	chr3R	17926606	intron	cpo +	chr3R	17927353	intron	cpo +	chr3R_14_17925001	chr3R_17925001	W2
2248	chr3R	18032783	18032802	chr3R	18040457	18040476	opus	7	7674	0.0	6.5	3.2	1.7	7693	chr3R	18032783	intergenic	not near genes	chr3R	18036630	intergenic	not near genes	chr3R	18040476	intergenic	not near genes	chr3R_7_18035001	chr3R_18035001	W2
2251	chr3R	18061573	18061614	chr3R	18063148	18063183	F-element	11	1570	2.0	1.5	1.8	3.9	1610	chr3R	18061573	intergenic	not near genes	chr3R	18062378	intergenic	not near genes	chr3R	18063183	intergenic	not near genes	chr3R_11_18060001	chr3R_18060001	W2
2258	chr3R	18331780	18331789	chr3R	18333275	18333284	hopper2	5	1495	8.5	3.0	5.8	0.7	1504	chr3R	18331780	3` UTR	CG15803 -	chr3R	18332532	intron	CG15803 -	chr3R	18333284	3` UTR	CG15803 -	chr3R_5_18330001	chr3R_18330001	W2
2267	chr3R	18606512	18606528	chr3R	18610739	18610761	F-element	7	4232	3.5	5.0	4.2	1.3	4249	chr3R	18606512	intron,intron	qin +,CG14304 -	chr3R	18608636	intron,intron	qin +,CG14304 -	chr3R	18610761	intron,intron	qin +,CG14304 -	chr3R_7_18605001	chr3R_18605001	W2
2321	chr3R	20109535	20109570	chr3R	20114742	20114777	copia	10	5207	1.0	4.0	2.5	2.9	5242	chr3R	20109535	intergenic	not near genes	chr3R	20112156	intergenic	not near genes	chr3R	20114777	intergenic	CG10887 +	chr3R_10_20110001	chr3R_20110001	W2
2326	chr3R	20156692	20156721	chr3R	20165863	20165892	roo	14	9171	4.5	4.0	4.2	2.7	9200	chr3R	20156692	intergenic	not near genes	chr3R	20161292	intergenic	not near genes	chr3R	20165892	intergenic	not near genes	chr3R_14_20160001	chr3R_20160001	W2
2332	chr3R	20245280	20245298	chr3R	20248891	20248909	F-element	6	3611	4.5	2.5	3.5	1.3	3629	chr3R	20245280	3` UTR	Nlg4 +	chr3R	20247094	intergenic	not near genes	chr3R	20248909	intergenic	not near genes	chr3R_6_20245001	chr3R_20245001	W2
2334	chr3R	20266516	20266548	chr3R	20272988	20273020	Burdock	12	6472	1.0	5.0	3.0	3.0	6504	chr3R	20266516	intron	cic +	chr3R	20269768	intron	cic +	chr3R	20273020	intron	cic +	chr3R_12_20265001	chr3R_20265001	W2
2337	chr3R	20330995	20331032	chr3R	20331482	20331519	roo	11	487	4.0	5.5	4.8	1.9	524	chr3R	20330995	intergenic	Sirt2 +	chr3R	20331257	intergenic	Sirt2 +	chr3R	20331519	intergenic	not near genes	chr3R_11_20330001	chr3R_20330001	W2
2346	chr3R	20506584	20506615	chr3R	20507388	20507419	BS	12	804	5.5	4.5	5.0	2.0	835	chr3R	20506584	intergenic	Or92a +	chr3R	20507002	intergenic	CG4288 -	chr3R	20507419	3` UTR	CG4288 -	chr3R_12_20505001	chr3R_20505001	W2
2347	chr3R	20513007	20513032	chr3R	20515711	20515736	opus	4	2704	8.0	12.5	10.2	0.4	2729	chr3R	20513007	intergenic	not near genes	chr3R	20514372	intergenic	not near genes	chr3R	20515736	intergenic	not near genes	chr3R_4_20510001	chr3R_20510001	W2
2364	chr3R	20854474	20854512	chr3R	20859270	20859303	Doc	13	4791	2.0	5.0	3.5	2.9	4829	chr3R	20854474	intron	Ir93a -	chr3R	20856888	intron	Ir93a -	chr3R	20859303	exon	Ir93a -	chr3R_13_20855001	chr3R_20855001	W2
2374	chr3R	21141697	21141700	chr3R	21150155	21150183	Tirant	4	8476	6.0	2.0	4.0	0.8	8486	chr3R	21141697	intron	SNF4Agamma +	chr3R	21145940	intron	SNF4Agamma +	chr3R	21150183	intron	SNF4Agamma +	chr3R_4_21145001	chr3R_21145001	W2
2397	chr3R	21761116	21761153	chr3R	21768509	21768546	mdg1	22	7393	6.5	3.0	4.8	3.8	7430	chr3R	21761116	exon	CG42335 +	chr3R	21764831	intron	CG42335 +	chr3R	21768546	exon	CG42335 +	chr3R_22_21760001	chr3R_21760001	W2
2416	chr3R	22234688	22234708	chr3R	22236008	22236028	pogo	10	1320	8.5	10.0	9.2	1.0	1340	chr3R	22234688	intron	SKIP +	chr3R	22235358	intron	SKIP +	chr3R	22236028	intron	SKIP +	chr3R_10_22235001	chr3R_22235001	W2
2417	chr3R	22239489	22239519	chr3R	22248550	22248580	roo	6	9061	7.0	3.0	5.0	1.0	9091	chr3R	22239489	intron	SKIP +	chr3R	22244034	intron	SKIP +	chr3R	22248580	intron	SKIP +	chr3R_6_22240001	chr3R_22240001	W2
2425	chr3R	22450540	22450577	chr3R	22453181	22453218	NOF	17	2641	2.5	3.0	2.8	4.5	2678	chr3R	22450540	intron	CG34376 +	chr3R	22451879	intron	CG34376 +	chr3R	22453218	intron	CG34376 +	chr3R_17_22450001	chr3R_22450001	W2
2437	chr3R	22881195	22881218	chr3R	22884902	22884925	Doc	9	3707	5.5	3.5	4.5	1.6	3730	chr3R	22881195	intergenic	not near genes	chr3R	22883060	intergenic	not near genes	chr3R	22884925	intergenic	not near genes	chr3R_9_22880001	chr3R_22880001	W2
2454	chr3R	23558399	23558427	chr3R	23560181	23560209	Bari1	20	1782	2.5	6.5	4.5	3.6	1810	chr3R	23558399	intron	beat-IV +	chr3R	23559304	intron	beat-IV +	chr3R	23560209	intron	beat-IV +	chr3R_20_23555001	chr3R_23555001	W2
2458	chr3R	23684695	23684728	chr3R	23685182	23685215	roo	18	486	5.5	8.5	7.0	2.2	520	chr3R	23684695	exon	CG18754 +	chr3R	23684955	intron	CG18754 +	chr3R	23685215	exon	CG18754 +	chr3R_18_23680001	chr3R_23680001	W2
2462	chr3R	23835403	23835434	chr3R	23844554	23844585	roo	10	9151	5.0	4.0	4.5	1.8	9182	chr3R	23835403	intron	CG34355 +	chr3R	23839994	intron	CG34355 +	chr3R	23844585	intron	CG34355 +	chr3R_10_23835001	chr3R_23835001	W2
2469	chr3R	24072083	24072112	chr3R	24072522	24072551	jockey	11	439	8.0	2.5	5.2	1.8	468	chr3R	24072083	intron	4EHP -	chr3R	24072317	intron	4EHP -	chr3R	24072551	intron	4EHP -	chr3R_11_24070001	chr3R_24070001	W2
2470	chr3R	24076914	24076948	chr3R	24078382	24078416	hobo	11	1468	7.0	6.5	6.8	1.4	1502	chr3R	24076914	intron	4EHP -	chr3R	24077665	intron	4EHP -	chr3R	24078416	intron	4EHP -	chr3R_11_24075001	chr3R_24075001	W2
2473	chr3R	24207217	24207245	chr3R	24212294	24212322	flea	17	5077	8.5	11.0	9.8	1.6	5105	chr3R	24207217	intron	twin -	chr3R	24209770	intron	twin -	chr3R	24212322	intron	twin -	chr3R_17_24205001	chr3R_24205001	W2
2477	chr3R	24493277	24493302	chr3R	24493507	24493532	BS	6	230	9.5	3.5	6.5	0.8	255	chr3R	24493277	intergenic	not near genes	chr3R	24493404	intergenic	not near genes	chr3R	24493532	intergenic	not near genes	chr3R_6_24490001	chr3R_24490001	W2
2482	chr3R	24730089	24730111	chr3R	24732468	24732490	Doc	8	2379	9.5	0.5	5.0	1.3	2401	chr3R	24730089	intron	tok +	chr3R	24731290	intron	tok +	chr3R	24732490	intron	tok +	chr3R_8_24730001	chr3R_24730001	W2
2486	chr3R	24927122	24927158	chr3R	24931914	24931950	Doc	13	4792	3.0	3.0	3.0	3.2	4828	chr3R	24927122	intergenic	Trf4-2 +	chr3R	24929536	intergenic	not near genes	chr3R	24931950	intergenic	CG11771 +	chr3R_13_24925001	chr3R_24925001	W2
2510	chr3R	25725827	25725862	chr3R	25734988	25735023	roo	9	9161	2.0	2.5	2.2	2.8	9196	chr3R	25725827	intron	LpR2 -	chr3R	25730425	intron	LpR2 -	chr3R	25735023	intron	LpR2 -	chr3R_9_25730001	chr3R_25730001	W2
2516	chr3R	25832692	25832723	chr3R	25841875	25841906	roo	13	9183	2.5	8.0	5.2	2.1	9214	chr3R	25832692	exon	alpha4GT2 +	chr3R	25837299	intron	alpha4GT2 +	chr3R	25841906	exon	alpha4GT2 +	chr3R_13_25835001	chr3R_25835001	W2
2523	chr3R	26108826	26108840	chr3R	26117410	26117424	Tirant	8	8584	6.5	0.5	3.5	1.8	8598	chr3R	26108826	5` UTR	CG31324 +	chr3R	26113125	intron	CG31324 +	chr3R	26117424	intron	CG31324 +	chr3R_8_26110001	chr3R_26110001	W2
2532	chr3R	26376321	26376357	chr3R	26385482	26385518	roo	11	9161	4.5	0.0	2.2	3.4	9197	chr3R	26376321	intergenic	not near genes	chr3R	26380920	intergenic	not near genes	chr3R	26385518	intergenic	not near genes	chr3R_11_26380001	chr3R_26380001	W2
2534	chr3R	26510508	26510526	chr3R	26519570	26519588	roo	7	9062	10.5	10.5	10.5	0.6	9080	chr3R	26510508	intron	plum -	chr3R	26515048	intron	plum -	chr3R	26519588	intron,5` UTR	plum -,CR45226 +	chr3R_7_26515001	chr3R_26515001	W2
2536	chr3R	26558324	26558361	chr3R	26565638	26565674	Stalker4	7	7312	3.0	3.5	3.2	1.7	7350	chr3R	26558324	intron	scrib +	chr3R	26561999	intron	scrib +	chr3R	26565674	intron	scrib +	chr3R_7_26560001	chr3R_26560001	W2
2540	chr3R	26642729	26642762	chr3R	26643123	26643156	jockey	13	394	7.0	4.0	5.5	2.0	427	chr3R	26642729	intergenic	not near genes	chr3R	26642942	intergenic	not near genes	chr3R	26643156	intergenic	not near genes	chr3R_13_26640001	chr3R_26640001	W2
2546	chr3R	26810552	26810582	chr3R	26811038	26811068	roo	8	486	2.0	8.5	5.2	1.3	516	chr3R	26810552	intron	Tl +	chr3R	26810810	intron	Tl +	chr3R	26811068	intron	Tl +	chr3R_8_26810001	chr3R_26810001	W2
2552	chr3R	27007404	27007438	chr3R	27016540	27016574	roo	16	9136	4.5	5.5	5.0	2.7	9170	chr3R	27007404	intron	RYa-R +	chr3R	27011989	intron	RYa-R +	chr3R	27016574	intron	RYa-R +	chr3R_16_27010001	chr3R_27010001	W2
2556	chr3R	27140513	27140548	chr3R	27148124	27148159	412	15	7611	2.5	4.0	3.2	3.6	7646	chr3R	27140513	intron	CG6051 -	chr3R	27144336	intron	CG6051 -	chr3R	27148159	intron	CG6051 -	chr3R_15_27140001	chr3R_27140001	W2
2559	chr3R	27342796	27342823	chr3R	27351378	27351405	Tirant	13	8582	5.0	7.0	6.0	1.9	8609	chr3R	27342796	intron	CG42534 +	chr3R	27347100	intron	CG42534 +	chr3R	27351405	intron	CG42534 +	chr3R_13_27345001	chr3R_27345001	W2
2562	chr3R	27521159	27521171	chr3R	27530369	27530381	roo	6	9210	12.5	8.0	10.2	0.5	9222	chr3R	27521159	intron	CG12885 +	chr3R	27525770	intron	CG12885 +	chr3R	27530381	intron	CG12885 +	chr3R_6_27525001	chr3R_27525001	W2
2568	chr3R	27725562	27725597	chr3R	27731005	27731040	I-element	10	5443	5.5	3.5	4.5	1.8	5478	chr3R	27725562	intergenic	not near genes	chr3R	27728301	intergenic	not near genes	chr3R	27731040	intergenic	not near genes	chr3R_10_27725001	chr3R_27725001	W2
2574	chr3R	27856759	27856780	chr3R	27858243	27858264	hopper2	7	1484	15.5	8.0	11.8	0.5	1505	chr3R	27856759	intron	CG34353 -	chr3R	27857512	intron	CG34353 -	chr3R	27858264	intron	CG34353 -	chr3R_7_27855001	chr3R_27855001	W2
2575	chr3R	27862951	27862978	chr3R	27868257	27868284	Transpac	18	5306	4.5	6.0	5.2	2.9	5333	chr3R	27862951	intron	CG34353 -	chr3R	27865618	intron	CG34353 -	chr3R	27868284	intron	CG34353 -	chr3R_18_27865001	chr3R_27865001	W2
2577	chr3R	27875698	27875733	chr3R	27882754	27882789	297	13	7056	3.5	2.5	3.0	3.2	7091	chr3R	27875698	intron	CG34353 -	chr3R	27879244	intron	CG34353 -	chr3R	27882789	intron	CG34353 -	chr3R_13_27875001	chr3R_27875001	W2
2581	chr3R	28068490	28068526	chr3R	28073933	28073969	I-element	9	5443	3.5	2.5	3.0	2.2	5479	chr3R	28068490	intron	CG34362 +	chr3R	28071230	intron	CG34362 +	chr3R	28073969	intron	CG34362 +	chr3R_9_28070001	chr3R_28070001	W2
2589	chr3R	28173672	28173704	chr3R	28181103	28181135	mdg1	5	7431	4.0	3.0	3.5	1.1	7463	chr3R	28173672	intron	CG34354 +	chr3R	28177404	intron	CG34354 +	chr3R	28181135	intron	CG34354 +	chr3R_5_28175001	chr3R_28175001	W2
2593	chr3R	28253347	28253367	chr3R	28255852	28255878	jockey	8	2510	6.0	7.0	6.5	1.1	2531	chr3R	28253347	intergenic	not near genes	chr3R	28254612	intergenic	not near genes	chr3R	28255878	intergenic	not near genes	chr3R_8_28250001	chr3R_28250001	W2
2596	chr3R	28302106	28302139	chr3R	28302546	28302579	jockey	11	439	1.5	5.5	3.5	2.4	473	chr3R	28302106	intergenic	not near genes	chr3R	28302342	intergenic	not near genes	chr3R	28302579	intergenic	not near genes	chr3R_11_28300001	chr3R_28300001	W2
2612	chr3R	28758282	28758299	chr3R	28763900	28763917	roo	10	5617	7.0	0.0	3.5	2.2	5635	chr3R	28758282	intergenic	aqrs -	chr3R	28761100	intergenic	not near genes	chr3R	28763917	intergenic	not near genes	chr3R_10_28760001	chr3R_28760001	W2
2613	chr3R	28763901	28763922	chr3R	28771345	28771366	Stalker4	7	7444	0.0	3.0	1.5	2.8	7465	chr3R	28763901	intergenic	not near genes	chr3R	28767634	intergenic	not near genes	chr3R	28771366	intergenic	not near genes	chr3R_7_28765001	chr3R_28765001	W2
2614	chr3R	28792873	28792902	chr3R	28797962	28797992	jockey	17	5095	4.5	6.0	5.2	2.7	5119	chr3R	28792873	intergenic	not near genes	chr3R	28795432	intergenic	not near genes	chr3R	28797992	intergenic	not near genes	chr3R_17_28795001	chr3R_28795001	W2
2628	chr3R	29079384	29079401	chr3R	29080757	29080774	NOF	16	1373	4.0	3.0	3.5	3.6	1390	chr3R	29079384	intron	CG11873 +	chr3R	29080079	intron	CG11873 +	chr3R	29080774	intron	CG11873 +	chr3R_16_29080001	chr3R_29080001	W2
2636	chr3R	29319821	29319858	chr3R	29320141	29320178	jockey	18	320	3.0	7.0	5.0	3.0	357	chr3R	29319821	intergenic	Cnx99A -	chr3R	29320000	intergenic	Cnx99A -	chr3R	29320178	intergenic	not near genes	chr3R_18_29315001	chr3R_29315001	W2
2638	chr3R	29406618	29406645	chr3R	29407905	29407932	jockey	11	1286	9.0	2.5	5.8	1.6	1314	chr3R	29406618	intron	Ptp99A +	chr3R	29407275	intron	Ptp99A +	chr3R	29407932	intron	Ptp99A +	chr3R_11_29405001	chr3R_29405001	W2
2653	chr3R	29738268	29738301	chr3R	29739736	29739769	hobo	7	1468	2.5	2.0	2.2	2.2	1501	chr3R	29738268	intergenic	CG1969 +,CG7598 +	chr3R	29739018	intron	CG1969 +	chr3R	29739769	5` UTR	CG1969 +	chr3R_7_29735001	chr3R_29735001	W2
2655	chr3R	29760361	29760392	chr3R	29761563	29761594	pogo	24	1202	4.5	4.0	4.2	4.6	1233	chr3R	29760361	intergenic	not near genes	chr3R	29760978	intergenic	not near genes	chr3R	29761594	intergenic	not near genes	chr3R_24_29760001	chr3R_29760001	W2
2661	chr3R	29882018	29882050	chr3R	29891176	29891208	roo	11	9158	2.0	4.0	3.0	2.8	9190	chr3R	29882018	intron	CG31038 +	chr3R	29886613	intron	CG31038 +	chr3R	29891208	intron	CG31038 +	chr3R_11_29885001	chr3R_29885001	W2
2669	chr3R	30084849	30084882	chr3R	30086317	30086350	hobo	18	1468	1.5	3.0	2.2	5.6	1501	chr3R	30084849	intron	sima +	chr3R	30085600	intron	sima +	chr3R	30086350	intron	sima +	chr3R_18_30085001	chr3R_30085001	W2
2674	chr3R	30238758	30238793	chr3R	30239923	30239959	1360	15	1165	1.5	3.0	2.2	4.7	1201	chr3R	30238758	intergenic	not near genes	chr3R	30239358	intergenic	not near genes	chr3R	30239959	intergenic	not near genes	chr3R_15_30235001	chr3R_30235001	W2
2676	chr3R	30317326	30317355	chr3R	30324919	30324948	roo	10	7593	0.5	4.5	2.5	2.9	7622	chr3R	30317326	intron	hdc +	chr3R	30321137	intron	hdc +	chr3R	30324948	intron	hdc +	chr3R_10_30320001	chr3R_30320001	W2
2678	chr3R	30375544	30375565	chr3R	30383168	30383189	412	4	7624	3.0	2.0	2.5	1.1	7645	chr3R	30375544	intergenic	not near genes	chr3R	30379366	intergenic	not near genes	chr3R	30383189	intergenic	not near genes	chr3R_4_30375001	chr3R_30375001	W2
2679	chr3R	30396219	30396247	chr3R	30404486	30404514	roo	10	8267	3.0	5.0	4.0	2.0	8295	chr3R	30396219	intergenic	not near genes	chr3R	30400366	intergenic	not near genes	chr3R	30404514	5` UTR	CR45570 +	chr3R_10_30400001	chr3R_30400001	W2
2684	chr3R	30480484	30480512	chr3R	30482953	30482981	jockey	11	2469	3.5	2.5	3.0	2.8	2497	chr3R	30480484	intron	PH4alphaEFB +	chr3R	30481732	intron	PH4alphaEFB +	chr3R	30482981	intron	PH4alphaEFB +	chr3R_11_30480001	chr3R_30480001	W2
2687	chr3R	30679519	30679522	chr3R	30686989	30686992	blood	4	7470	4.0	2.0	3.0	1.0	7473	chr3R	30679519	intergenic	not near genes	chr3R	30683256	intergenic	not near genes	chr3R	30686992	intergenic	not near genes	chr3R_4_30680001	chr3R_30680001	W2
2688	chr3R	30818816	30818846	chr3R	30820382	30820412	1360	8	1566	1.5	4.5	3.0	2.0	1596	chr3R	30818816	intron	cindr +	chr3R	30819614	intron	cindr +	chr3R	30820412	intron	cindr +	chr3R_8_30815001	chr3R_30815001	W2
2699	chr3R	31074232	31074262	chr3R	31081831	31081861	springer	11	7599	3.0	2.5	2.8	2.9	7629	chr3R	31074232	intron	Sox100B +	chr3R	31078046	intron	Sox100B +	chr3R	31081861	intron	Sox100B +	chr3R_11_31075001	chr3R_31075001	W2
2700	chr3R	31279377	31279395	chr3R	31285569	31285587	diver	5	6192	2.0	4.0	3.0	1.2	6210	chr3R	31279377	intergenic	not near genes	chr3R	31282482	intergenic	not near genes	chr3R	31285587	intergenic	not near genes	chr3R_5_31280001	chr3R_31280001	W2
2701	chr3R	31413088	31413120	chr3R	31418289	31418321	copia	12	5201	3.0	0.5	1.8	4.3	5233	chr3R	31413088	intron	Gprk2 +	chr3R	31415704	intron	Gprk2 +	chr3R	31418321	intron	Gprk2 +	chr3R_12_31415001	chr3R_31415001	W2
2707	chr3R	31691529	31691558	chr3R	31696296	31696325	Doc	10	4767	5.0	3.5	4.2	1.9	4796	chr3R	31691529	intergenic	not near genes	chr3R	31693927	intergenic	not near genes	chr3R	31696325	intergenic	not near genes	chr3R_10_31690001	chr3R_31690001	W2
2713	chr4	76494	76517	chr4	81938	81961	I-element	6	5444	2.0	3.0	2.5	1.7	5467	chr4	76494	intron	pan +	chr4	79228	intron	pan +	chr4	81961	intron	pan +	chr4_6_75001	chr4_75001	W2
2714	chr4	319988	320018	chr4	328165	328195	Stalker2	11	8177	5.0	1.0	3.0	2.8	8207	chr4	319988	3` UTR	CG32850 +	chr4	324092	intron	CG32850 +	chr4	328195	3` UTR,3` UTR	CG32850 +,PMCA -	chr4_11_320001	chr4_320001	W2
2715	chr4	671602	671633	chr4	680186	680217	Tirant	15	8583	2.5	6.0	4.2	2.9	8615	chr4	671602	intron	CG11360 +	chr4	675910	intron	CG11360 +	chr4	680217	intron	CG11360 +	chr4_15_675001	chr4_675001	W2
2719	chrX	295859	295876	chrX	303480	303497	412	5	7621	4.5	3.5	4.0	1.0	7638	chrX	295859	intron	CG3777 +	chrX	299678	intron	CG3777 +	chrX	303497	intron	CG3777 +	chrX_5_295001	chrX_295001	W2
2721	chrX	428415	428450	chrX	434601	434636	3S18	5	6186	4.5	3.0	3.8	1.0	6221	chrX	428415	intron	CG32816 -	chrX	431526	intron	CG32816 -	chrX	434636	intron	CG32816 -	chrX_5_430001	chrX_430001	W2
2722	chrX	551420	551454	chrX	558983	559017	412	10	7563	2.5	5.0	3.8	2.1	7597	chrX	551420	intron	Appl +	chrX	555218	intron	Appl +	chrX	559017	intron	Appl +	chrX_10_555001	chrX_555001	W2
2723	chrX	812273	812291	chrX	817905	817923	297	5	5632	2.5	3.0	2.8	1.3	5650	chrX	812273	intron	CG43867 -	chrX	815098	intron	CG43867 -	chrX	817923	intron	CG43867 -	chrX_5_815001	chrX_815001	W2
2724	chrX	827603	827634	chrX	835396	835427	roo	10	7793	1.0	2.5	1.8	3.6	7824	chrX	827603	intron	CG43867 -	chrX	831515	intron	CG43867 -	chrX	835427	intron	CG43867 -	chrX_10_830001	chrX_830001	W2
2725	chrX	906705	906734	chrX	908495	908524	S-element	8	1790	5.0	4.0	4.5	1.5	1819	chrX	906705	intron	CG43867 -	chrX	907614	intron	CG43867 -	chrX	908524	intron	CG43867 -	chrX_8_905001	chrX_905001	W2
2727	chrX	1357775	1357806	chrX	1367946	1367977	Doc	8	10171	4.5	3.5	4.0	1.6	10202	chrX	1357775	intergenic	png -	chrX	1362876	intergenic	not near genes	chrX	1367977	intergenic	not near genes	chrX_8_1360001	chrX_1360001	W2
2729	chrX	1518040	1518073	chrX	1523443	1523476	jockey	12	5403	2.5	3.5	3.0	3.0	5436	chrX	1518040	intergenic	inc +	chrX	1520758	intergenic	not near genes	chrX	1523476	intergenic	not near genes	chrX_12_1520001	chrX_1520001	W2
2730	chrX	1627971	1627999	chrX	1635440	1635468	gtwin	6	7469	4.5	1.5	3.0	1.5	7497	chrX	1627971	intron,intron	Mur2B -,br +	chrX	1631720	intron,intron	Mur2B -,br +	chrX	1635468	intron,intron	Mur2B -,br +	chrX_6_1630001	chrX_1630001	W2
2733	chrX	1930534	1930569	chrX	1938106	1938141	opus	7	7572	2.5	6.0	4.2	1.3	7607	chrX	1930534	intergenic	CG11596 +	chrX	1934338	intergenic	not near genes	chrX	1938141	3` UTR	CG3857 -	chrX_7_1930001	chrX_1930001	W2
2734	chrX	1954883	1954915	chrX	1962824	1962856	Stalker2	6	7941	1.5	2.0	1.8	2.1	7973	chrX	1954883	intron	Hr4 +	chrX	1958870	intron	Hr4 +	chrX	1962856	intron	Hr4 +	chrX_6_1955001	chrX_1955001	W2
2737	chrX	2399835	2399866	chrX	2408189	2408209	roo	10	8353	2.5	2.5	2.5	2.9	8374	chrX	2399835	intergenic	not near genes	chrX	2404022	intergenic	not near genes	chrX	2408209	intergenic	not near genes	chrX_10_2400001	chrX_2400001	W2
2742	chrX	2844899	2844922	chrX	2852310	2852333	mdg1	6	7411	4.0	4.0	4.0	1.2	7434	chrX	2844899	intron	kirre +	chrX	2848616	intron	kirre +	chrX	2852333	intron	kirre +	chrX_6_2845001	chrX_2845001	W2
2751	chrX	3415023	3415045	chrX	3421209	3421231	3S18	10	6186	0.0	3.5	1.8	3.6	6208	chrX	3415023	intron,intron	CR44999 +,CG12535 -	chrX	3418127	intron,intron	CR44999 +,CG12535 -	chrX	3421231	intron,intron	CR44999 +,CG12535 -	chrX_10_3415001	chrX_3415001	W2
2752	chrX	3493088	3493122	chrX	3502248	3502282	roo	10	9160	1.5	1.0	1.2	4.5	9194	chrX	3493088	intron,intron	CR44999 +,Gas8 -	chrX	3497685	intron,intron	CR44999 +,Gas8 -	chrX	3502282	intron,intron	CR44999 +,Gas8 -	chrX_10_3495001	chrX_3495001	W2
2754	chrX	3597555	3597579	chrX	3619724	3619748	roo	7	22169	3.0	3.5	3.2	1.7	22193	chrX	3597555	intron	AstA-R1 +	chrX	3608652	intron	AstA-R1 +	chrX	3619748	intron	AstA-R1 +	chrX_7_3605001	chrX_3605001	W2
2758	chrX	3726769	3726797	chrX	3730156	3730195	NOF	10	3397	2.0	0.0	1.0	5.0	3426	chrX	3726769	intron	tlk +	chrX	3728482	intron	tlk +	chrX	3730195	intron	tlk +	chrX_10_3725001	chrX_3725001	W2
2763	chrX	3986865	3986895	chrX	3994499	3994529	412	5	7634	4.0	3.0	3.5	1.1	7664	chrX	3986865	intergenic	not near genes	chrX	3990697	intergenic	not near genes	chrX	3994529	intergenic	not near genes	chrX_5_3990001	chrX_3990001	W2
2765	chrX	4157895	4157921	chrX	4164949	4164975	297	8	7054	4.0	1.5	2.8	2.1	7080	chrX	4157895	intron	Fas2 -	chrX	4161435	intron	Fas2 -	chrX	4164975	intron	Fas2 -	chrX_8_4160001	chrX_4160001	W2
2773	chrX	4700403	4700425	chrX	4700736	4700769	jockey	9	343	3.0	3.0	3.0	2.2	366	chrX	4700403	3` UTR	ctp +	chrX	4700586	3` UTR	ctp +	chrX	4700769	3` UTR	ctp +	chrX_9_4700001	chrX_4700001	W2
2775	chrX	4763252	4763283	chrX	4763741	4763772	Stalker4	7	489	1.5	2.5	2.0	2.3	520	chrX	4763252	intergenic	not near genes	chrX	4763512	intergenic	not near genes	chrX	4763772	intergenic	not near genes	chrX_7_4760001	chrX_4760001	W2
2776	chrX	4792385	4792406	chrX	4792819	4792840	jockey	9	434	2.5	4.0	3.2	2.1	455	chrX	4792385	intergenic	not near genes	chrX	4792612	intergenic	not near genes	chrX	4792840	intergenic	not near genes	chrX_9_4790001	chrX_4790001	W2
2777	chrX	4827965	4827993	chrX	4835337	4835364	Stalker4	8	7370	4.0	0.5	2.2	2.5	7399	chrX	4827965	intergenic	not near genes	chrX	4831664	intergenic	not near genes	chrX	4835364	intergenic	not near genes	chrX_8_4830001	chrX_4830001	W2
2780	chrX	5096275	5096306	chrX	5103841	5103872	springer	8	7566	3.0	3.0	3.0	2.0	7597	chrX	5096275	intron,intron	CG15465 +,rg +	chrX	5100074	intron,intron	CG15465 +,rg +	chrX	5103872	intron,intron	CG15465 +,rg +	chrX_8_5100001	chrX_5100001	W2
2785	chrX	5338710	5338727	chrX	5339964	5339981	jockey	7	1254	3.0	3.0	3.0	1.8	1271	chrX	5338710	intergenic	not near genes	chrX	5339346	intergenic	not near genes	chrX	5339981	intergenic	SK +	chrX_7_5335001	chrX_5335001	W2
2789	chrX	5524839	5524870	chrX	5528703	5528734	412	6	3864	2.0	3.5	2.8	1.6	3895	chrX	5524839	intergenic	snoRNA:Psi28S-3342 -	chrX	5526786	intergenic	not near genes	chrX	5528734	intergenic	Vsx2 -	chrX_6_5525001	chrX_5525001	W2
2793	chrX	5883810	5883841	chrX	5884052	5884083	pogo	5	242	1.0	7.5	4.2	1.0	273	chrX	5883810	intron	CR45668 -	chrX	5883946	intron	CR45668 -	chrX	5884083	intron	CR45668 -	chrX_5_5880001	chrX_5880001	W2
2794	chrX	5884161	5884192	chrX	5884403	5884434	pogo	6	242	2.0	3.5	2.8	1.6	273	chrX	5884161	intron	CR45668 -	chrX	5884298	intron	CR45668 -	chrX	5884434	intron	CR45668 -	chrX_6_5880001	chrX_5880001	W2
2796	chrX	6171583	6171616	chrX	6179017	6179050	Quasimodo	7	7434	2.0	2.0	2.0	2.3	7467	chrX	6171583	intron	Ca-alpha1T -	chrX	6175316	intron	Ca-alpha1T -	chrX	6179050	intron	Ca-alpha1T -	chrX_7_6175001	chrX_6175001	W2
2797	chrX	6335233	6335244	chrX	6337728	6337755	Tirant	4	2507	0.0	3.0	1.5	1.6	2522	chrX	6335233	intergenic	not near genes	chrX	6336494	intergenic	not near genes	chrX	6337755	intergenic	CG3842 +	chrX_4_6335001	chrX_6335001	W2
2800	chrX	6392879	6392899	chrX	6397645	6397665	Doc	9	4766	3.5	7.0	5.2	1.5	4786	chrX	6392879	intergenic	not near genes	chrX	6395272	intergenic	not near genes	chrX	6397665	intergenic	not near genes	chrX_9_6395001	chrX_6395001	W2
2802	chrX	6562819	6562848	chrX	6571302	6571331	Tirant	7	8483	3.5	3.0	3.2	1.7	8512	chrX	6562819	intron	CG34417 +	chrX	6567075	intron	CG34417 +	chrX	6571331	intron	CG34417 +	chrX_7_6565001	chrX_6565001	W2
2806	chrX	7023604	7023631	chrX	7030995	7031022	Tabor	7	7391	3.0	1.5	2.2	2.2	7418	chrX	7023604	intron	CG12541 -	chrX	7027313	intron	CG12541 -	chrX	7031022	intron	CG12541 -	chrX_7_7025001	chrX_7025001	W2
2808	chrX	7125249	7125267	chrX	7134409	7134427	roo	6	9160	2.5	3.5	3.0	1.5	9178	chrX	7125249	intergenic	not near genes	chrX	7129838	intergenic	not near genes	chrX	7134427	intergenic	not near genes	chrX_6_7125001	chrX_7125001	W2
2810	chrX	7845723	7845759	chrX	7847215	7847251	hopper2	4	1492	2.5	2.0	2.2	1.2	1528	chrX	7845723	intergenic	not near genes	chrX	7846487	intergenic	not near genes	chrX	7847251	intergenic	not near genes	chrX_4_7845001	chrX_7845001	W2
2813	chrX	8031427	8031453	chrX	8035737	8035763	Juan	11	4310	3.5	8.0	5.8	1.6	4336	chrX	8031427	intergenic	not near genes	chrX	8033595	intergenic	not near genes	chrX	8035763	3` UTR	CG2233 -	chrX_11_8030001	chrX_8030001	W2
2816	chrX	8364845	8364876	chrX	8365243	8365274	BS	7	398	1.0	2.0	1.5	2.8	429	chrX	8364845	intron	nAChRalpha3 -	chrX	8365060	intron	nAChRalpha3 -	chrX	8365274	intron	nAChRalpha3 -	chrX_7_8365001	chrX_8365001	W2
2824	chrX	8922338	8922361	chrX	8922773	8922796	jockey	5	435	0.5	4.5	2.5	1.4	458	chrX	8922338	intron	rdgA +	chrX	8922567	intron	rdgA +	chrX	8922796	intron	rdgA +	chrX_5_8920001	chrX_8920001	W2
2825	chrX	8948769	8948784	chrX	8956280	8956295	roo	4	7511	2.5	4.0	3.2	1.0	7526	chrX	8948769	intron	rdgA +	chrX	8952532	intron	rdgA +	chrX	8956295	intron	rdgA +	chrX_4_8950001	chrX_8950001	W2
2831	chrX	9508140	9508166	chrX	9509659	9509685	jockey	11	1519	1.5	3.0	2.2	3.4	1545	chrX	9508140	intron	CG32700 -	chrX	9508912	intron	CG32700 -	chrX	9509685	intron	CG32700 -	chrX_11_9505001	chrX_9505001	W2
2832	chrX	9575789	9575811	chrX	9576114	9576136	mdg3	7	325	6.0	6.5	6.2	1.0	347	chrX	9575789	intron,exon	CG32699 -,CG42395 -	chrX	9575962	intron,intron	CG32699 -,CG42395 -	chrX	9576136	intron,5` UTR	CG32699 -,CG42395 -	chrX_7_9575001	chrX_9575001	W2
2840	chrX	10138223	10138242	chrX	10145728	10145747	412	5	7505	5.5	0.5	3.0	1.2	7524	chrX	10138223	intron,intron	RhoU +,CR44894 -	chrX	10141985	intron,intron	RhoU +,CR44894 -	chrX	10145747	intron,intron	RhoU +,CR44894 -	chrX_5_10140001	chrX_10140001	W2
2841	chrX	10267305	10267329	chrX	10276456	10276480	roo	6	9151	0.0	1.0	0.5	4.0	9175	chrX	10267305	3` UTR	alpha-Man-I -	chrX	10271892	intron	alpha-Man-I -	chrX	10276480	3` UTR	alpha-Man-I -	chrX_6_10270001	chrX_10270001	W2
2845	chrX	10348800	10348829	chrX	10356366	10356395	springer	4	7566	6.0	7.0	6.5	0.5	7595	chrX	10348800	intergenic	snoRNA:U3:9B +	chrX	10352598	intergenic	not near genes	chrX	10356395	intergenic	l(1)G0289 -	chrX_4_10350001	chrX_10350001	W2
2847	chrX	10550853	10550888	chrX	10552321	10552356	hobo	12	1468	2.0	1.5	1.8	4.3	1503	chrX	10550853	intron	spri -	chrX	10551604	intron	spri -	chrX	10552356	intron	spri -	chrX_12_10550001	chrX_10550001	W2
2848	chrX	10686055	10686082	chrX	10691193	10691220	roo	7	5138	5.0	3.0	4.0	1.4	5165	chrX	10686055	intron	X11Lbeta +	chrX	10688638	intron	X11Lbeta +	chrX	10691220	intron	X11Lbeta +	chrX_7_10685001	chrX_10685001	W2
2849	chrX	10772675	10772696	chrX	10772759	10772780	Tirant	9	83	1.0	3.0	2.0	3.0	105	chrX	10772675	intron	CG15211 +	chrX	10772728	intron	CG15211 +	chrX	10772780	intron	CG15211 +	chrX_9_10770001	chrX_10770001	W2
2851	chrX	11095996	11096020	chrX	11103099	11103123	HMS-Beagle	10	7102	4.0	3.5	3.8	2.1	7127	chrX	11095996	intergenic	not near genes	chrX	11099560	intergenic	not near genes	chrX	11103123	intron	CG42249 +	chrX_10_11095001	chrX_11095001	W2
2853	chrX	11184258	11184273	chrX	11189335	11189350	flea	5	5077	4.5	6.5	5.5	0.8	5092	chrX	11184258	intergenic	not near genes	chrX	11186804	intergenic	not near genes	chrX	11189350	intergenic	not near genes	chrX_5_11185001	chrX_11185001	W2
2855	chrX	11194451	11194461	chrX	11201873	11201883	gypsy5	4	7422	2.5	5.5	4.0	0.8	7432	chrX	11194451	intergenic	not near genes	chrX	11198167	intergenic	not near genes	chrX	11201883	intergenic	CG11106 +	chrX_4_11195001	chrX_11195001	W2
2856	chrX	11312055	11312082	chrX	11319409	11319436	Stalker2	5	7354	5.5	1.5	3.5	1.1	7381	chrX	11312055	intergenic	not near genes	chrX	11315746	intergenic	not near genes	chrX	11319436	intergenic	not near genes	chrX_5_11315001	chrX_11315001	W2
2859	chrX	11633414	11633448	chrX	11640469	11640503	297	6	7055	1.5	1.5	1.5	2.4	7089	chrX	11633414	intron	Ptp10D +	chrX	11636958	intron	Ptp10D +	chrX	11640503	intron	Ptp10D +	chrX_6_11635001	chrX_11635001	W2
2860	chrX	11645111	11645137	chrX	11648281	11648308	NOF	7	3170	1.0	2.0	1.5	2.8	3197	chrX	11645111	intron	Ptp10D +	chrX	11646710	intron	Ptp10D +	chrX	11648308	intron	Ptp10D +	chrX_7_11645001	chrX_11645001	W2
2866	chrX	12381875	12381901	chrX	12385776	12385783	flea	5	3898	2.5	2.0	2.2	1.6	3908	chrX	12381875	intergenic	not near genes	chrX	12383829	intergenic	not near genes	chrX	12385783	intergenic	not near genes	chrX_5_12380001	chrX_12380001	W2
2878	chrX	13429460	13429494	chrX	13430610	13430644	jockey	8	1150	2.5	3.0	2.8	2.1	1184	chrX	13429460	intergenic	not near genes	chrX	13430052	intergenic	not near genes	chrX	13430644	intergenic	not near genes	chrX_8_13430001	chrX_13430001	W2
2881	chrX	13463643	13463676	chrX	13469221	13469253	mdg3	10	5578	6.5	4.0	5.2	1.6	5610	chrX	13463643	intron	Neto +	chrX	13466448	intron	Neto +	chrX	13469253	intron	Neto +	chrX_10_13465001	chrX_13465001	W2
2887	chrX	13937982	13937994	chrX	13941254	13941266	I-element	5	3272	1.0	3.5	2.2	1.6	3284	chrX	13937982	intron	mamo -	chrX	13939624	intron	mamo -	chrX	13941266	intron	mamo -	chrX_5_13935001	chrX_13935001	W2
2889	chrX	14105020	14105053	chrX	14114172	14114204	roo	10	9152	2.5	4.0	3.2	2.4	9184	chrX	14105020	intergenic	not near genes	chrX	14109612	intergenic	not near genes	chrX	14114204	5` UTR	CR44657 +	chrX_10_14105001	chrX_14105001	W2
2891	chrX	14157595	14157610	chrX	14163253	14163268	297	5	5658	4.0	2.5	3.2	1.2	5673	chrX	14157595	intergenic	not near genes	chrX	14160432	intergenic	not near genes	chrX	14163268	intergenic	not near genes	chrX_5_14160001	chrX_14160001	W2
2894	chrX	14416306	14416332	chrX	14421074	14421100	F-element	8	4768	2.0	2.0	2.0	2.7	4794	chrX	14416306	intron	dpr8 +	chrX	14418703	intron	dpr8 +	chrX	14421100	intron	dpr8 +	chrX_8_14415001	chrX_14415001	W2
2897	chrX	14636461	14636493	chrX	14641903	14641935	I-element	10	5442	2.0	3.0	2.5	2.9	5474	chrX	14636461	intron	NetA -	chrX	14639198	intron	NetA -	chrX	14641935	intron	NetA -	chrX_10_14635001	chrX_14635001	W2
2901	chrX	14778034	14778054	chrX	14782832	14782852	Doc	4	4798	3.5	4.5	4.0	0.8	4818	chrX	14778034	intergenic	CG5347 +	chrX	14780443	intergenic	not near genes	chrX	14782852	intergenic	Ag5r2 -	chrX_4_14780001	chrX_14780001	W2
2902	chrX	14818764	14818795	chrX	14823969	14824000	copia	9	5205	4.0	1.5	2.8	2.4	5236	chrX	14818764	intron	rut -	chrX	14821382	intron	rut -	chrX	14824000	intron	rut -	chrX_9_14820001	chrX_14820001	W2
2904	chrX	14936857	14936885	chrX	14946115	14946143	roo	4	9258	2.0	3.5	2.8	1.1	9286	chrX	14936857	intron	pdgy -	chrX	14941500	intron	pdgy -	chrX	14946143	intron	pdgy -	chrX_4_14940001	chrX_14940001	W2
2912	chrX	15273706	15273733	chrX	15274874	15274901	1360	6	1168	1.5	4.5	3.0	1.5	1195	chrX	15273706	intergenic	not near genes	chrX	15274304	intergenic	not near genes	chrX	15274901	intergenic	not near genes	chrX_6_15270001	chrX_15270001	W2
2914	chrX	15413050	15413081	chrX	15417353	15417384	Juan	6	4303	4.5	2.0	3.2	1.4	4334	chrX	15413050	intron	Cngl -	chrX	15415217	intron	Cngl -	chrX	15417384	intron	Cngl -	chrX_6_15415001	chrX_15415001	W2
2919	chrX	16222779	16222802	chrX	16231130	16231153	roo	4	8351	3.5	2.0	2.8	1.1	8374	chrX	16222779	intergenic	not near genes	chrX	16226966	intergenic	not near genes	chrX	16231153	intergenic	not near genes	chrX_4_16225001	chrX_16225001	W2
2922	chrX	16492643	16492679	chrX	16498221	16498257	mdg3	13	5578	8.0	4.0	6.0	1.9	5614	chrX	16492643	intron	para -	chrX	16495450	intron	para -	chrX	16498257	intron	para -	chrX_13_16495001	chrX_16495001	W2
2928	chrX	17195216	17195234	chrX	17200302	17200319	flea	4	5085	5.0	3.5	4.2	0.8	5103	chrX	17195216	3` UTR	baz +	chrX	17197768	3` UTR	baz +	chrX	17200319	3` UTR	baz +	chrX_4_17195001	chrX_17195001	W2
2934	chrX	17556940	17556958	chrX	17557440	17557458	mdg1	4	500	4.5	2.5	3.5	0.9	518	chrX	17556940	intron	CG43658 -	chrX	17557199	intron	CG43658 -	chrX	17557458	intron	CG43658 -	chrX_4_17555001	chrX_17555001	W2
2938	chrX	17792949	17792983	chrX	17796248	17796281	flea	9	3299	1.5	2.5	2.0	3.0	3332	chrX	17792949	intron	OdsH +	chrX	17794615	intron	OdsH +	chrX	17796281	intron	OdsH +	chrX_9_17790001	chrX_17790001	W2
2944	chrX	18194066	18194103	chrX	18194602	18194639	BS	11	536	2.5	2.0	2.2	3.4	573	chrX	18194066	intron	Frq2 +	chrX	18194352	intron	Frq2 +	chrX	18194639	intron	Frq2 +	chrX_11_18190001	chrX_18190001	W2
2948	chrX	18429491	18429527	chrX	18434803	18434839	Transpac	8	5312	1.5	4.0	2.8	2.1	5348	chrX	18429491	intergenic	not near genes	chrX	18432165	intergenic	not near genes	chrX	18434839	intergenic	not near genes	chrX_8_18430001	chrX_18430001	W2
2959	chrX	18957076	18957102	chrX	18965740	18965766	roo	4	8664	2.0	5.0	3.5	0.9	8690	chrX	18957076	intron	CG43759 +	chrX	18961421	intron	CG43759 +	chrX	18965766	intron	CG43759 +	chrX_4_18960001	chrX_18960001	W2
2961	chrX	19060407	19060432	chrX	19065192	19065217	Doc	7	4785	4.0	5.5	4.8	1.2	4810	chrX	19060407	intron	CG14190 +	chrX	19062812	intron	CG14190 +	chrX	19065217	intron	CG14190 +	chrX_7_19060001	chrX_19060001	W2
2965	chrX	19136557	19136585	chrX	19143478	19143505	412	5	6921	4.0	2.5	3.2	1.2	6948	chrX	19136557	intergenic	not near genes	chrX	19140031	intergenic	not near genes	chrX	19143505	3` UTR	RhoGAP18B -	chrX_5_19140001	chrX_19140001	W2
2970	chrX	19356992	19357016	chrX	19358434	19358458	NOF	10	1442	5.5	1.0	3.2	2.4	1466	chrX	19356992	intron	kek5 +	chrX	19357725	intron	kek5 +	chrX	19358458	intron	kek5 +	chrX_10_19355001	chrX_19355001	W2
2971	chrX	19380155	19380188	chrX	19380397	19380430	pogo	9	240	1.0	1.5	1.2	4.1	275	chrX	19380155	intron	kek5 +	chrX	19380292	intron	kek5 +	chrX	19380430	intron	kek5 +	chrX_9_19380001	chrX_19380001	W2
2973	chrX	19472126	19472139	chrX	19472697	19472710	jockey	5	571	4.0	4.5	4.2	1.0	584	chrX	19472126	intergenic	kek5 +	chrX	19472418	intergenic	not near genes	chrX	19472710	intergenic	not near genes	chrX_5_19470001	chrX_19470001	W2
2974	chrX	19472144	19472156	chrX	19472696	19472727	jockey	5	567	2.5	4.5	3.5	1.1	583	chrX	19472144	intergenic	kek5 +	chrX	19472436	intergenic	not near genes	chrX	19472727	intergenic	not near genes	chrX_5_19470001	chrX_19470001	W2
2978	chrX	19710071	19710091	chrX	19711858	19711878	S-element	5	1787	3.0	3.0	3.0	1.2	1807	chrX	19710071	intron	meso18E -	chrX	19710974	intron	meso18E -	chrX	19711878	intron	meso18E -	chrX_5_19710001	chrX_19710001	W2
2989	chrX	20377330	20377348	chrX	20378798	20378816	hobo	6	1468	5.5	4.5	5.0	1.0	1486	chrX	20377330	intergenic	not near genes	chrX	20378073	intergenic	not near genes	chrX	20378816	intergenic	not near genes	chrX_6_20375001	chrX_20375001	W2
2996	chrX	20504127	20504158	chrX	20505649	20505680	transib2	14	1522	2.5	3.5	3.0	3.5	1553	chrX	20504127	intron	RhoGAP19D -	chrX	20504904	intron	RhoGAP19D -	chrX	20505680	intron	RhoGAP19D -	chrX_14_20500001	chrX_20500001	W2
3001	chrX	20940729	20940745	chrX	20942199	20942215	hobo	6	1470	3.0	3.0	3.0	1.5	1486	chrX	20940729	intergenic	not near genes	chrX	20941472	intergenic	not near genes	chrX	20942215	intergenic	not near genes	chrX_6_20940001	chrX_20940001	W2
3002	chrX	20957008	20957015	chrX	20962451	20962458	I-element	5	5443	0.0	4.5	2.2	1.6	5450	chrX	20957008	intergenic	not near genes	chrX	20959733	intergenic	not near genes	chrX	20962458	intergenic	Ser6 -	chrX_5_20955001	chrX_20955001	W2
3008	chrX	22522626	22522655	chrX	22525447	22525455	NOF	10	2819	4.5	0.0	2.2	3.1	2829	chrX	22522626	intron	CG17600 +	chrX	22524040	intron	CG17600 +	chrX	22525455	intron	CG17600 +	chrX_10_22520001	chrX_22520001	W2
3010	chrX	22564559	22564566	chrX	22575130	22575137	jockey	4	10571	10.0	6.0	8.0	0.4	10578	chrX	22564559	intergenic	not near genes	chrX	22569848	intergenic	not near genes	chrX	22575137	intergenic	not near genes	chrX_4_22565001	chrX_22565001	W2
3013	chrX	22697499	22697520	chrX	22701797	22701818	Juan	4	4298	3.5	4.0	3.8	0.8	4319	chrX	22697499	intron	CR44997 +	chrX	22699658	intron	CR44997 +	chrX	22701818	intron	CR44997 +	chrX_4_22695001	chrX_22695001	W2
3014	chrX	22771506	22771533	chrX	22774798	22774825	297	6	3292	2.5	2.5	2.5	1.7	3319	chrX	22771506	intron	CR44997 +	chrX	22773166	intron	CR44997 +	chrX	22774825	intron	CR44997 +	chrX_6_22770001	chrX_22770001	W2
3018	chrX	22987111	22987135	chrX	22989771	22989795	Burdock	5	2660	2.5	2.5	2.5	1.4	2684	chrX	22987111	intron,intron	stnA -,stnB -	chrX	22988453	intron,intron	stnA -,stnB -	chrX	22989795	intron,intron	stnA -,stnB -	chrX_5_22985001	chrX_22985001	W2
3019	chrX	22996310	22996339	chrX	23003545	23003574	roo	7	7235	1.5	4.0	2.8	1.8	7264	chrX	22996310	intron,intron	stnA -,stnB -	chrX	22999942	intron,intron	stnA -,stnB -	chrX	23003574	intron,intron	stnA -,stnB -	chrX_7_22995001	chrX_22995001	W2
3022	chrY	1431369	1431373	chrY	1447406	1447410	Doc	7	16037	3.5	9.5	6.5	0.9	16041	chrY	1431369	intergenic	not near genes	chrY	1439390	intergenic	not near genes	chrY	1447410	intergenic	not near genes	chrY_7_1435001	chrY_1435001	W2