SV#	Chr_5p	Chr_coord_5p_start	Chr_coord_5p_end	Chr_3p	Chr_coord_3p_start	Chr_coord_3p_end	repName	Reads_collapsed	avg_del_len	RefGen_3prime	Refgen_5prime	RefGen_Avg	Coverage_Ratio	size	Chr_5p	Chr_coord_5p	classification_5p	comment_5p	Chr_mid	Chr_coord_mid	classification_mid	comment_mid	Chr_3p	Chr_coord_3p	classification_3p	comment_3p	depletion_code	loci_code	libname
2	chr2L	47440	47481	chr2L	52570	52611	jockey	28	5130	10.5	10.0	10.2	2.5	5171	chr2L	47440	intron	Cda5 -	chr2L	50026	intron	Cda5 -	chr2L	52611	intron	Cda5 -	chr2L_28_50001	chr2L_50001	Sg4
3	chr2L	45963	46010	chr2L	53372	53419	jockey	17	7410	27.5	22.0	24.8	0.7	7456	chr2L	45963	intron	Cda5 -	chr2L	49691	intron	Cda5 -	chr2L	53419	intron	Cda5 -	chr2L_17_45001	chr2L_45001	Sg4
7	chr2L	347868	347912	chr2L	355393	355437	blood	10	7525	4.0	2.0	3.0	2.5	7569	chr2L	347868	3` UTR	Plc21C +	chr2L	351652	intron	Plc21C +	chr2L	355437	3` UTR	Plc21C +	chr2L_10_350001	chr2L_350001	Sg4
12	chr2L	686913	686939	chr2L	695978	696004	roo	6	9065	5.0	4.5	4.8	1.0	9091	chr2L	686913	intron	ds -	chr2L	691458	intron	ds -	chr2L	696004	intron	ds -	chr2L_6_690001	chr2L_690001	Sg4
15	chr2L	770438	770488	chr2L	772244	772294	Bari1	17	1805	2.0	4.5	3.2	4.0	1856	chr2L	770438	intergenic	not near genes	chr2L	771366	intergenic	not near genes	chr2L	772294	intergenic	CR44614 +	chr2L_17_770001	chr2L_770001	Sg4
20	chr2L	976855	976913	chr2L	984516	984574	roo	4	7661	0.5	2.5	1.5	1.6	7719	chr2L	976855	intergenic	not near genes	chr2L	980714	intergenic	not near genes	chr2L	984574	intergenic	not near genes	chr2L_4_980001	chr2L_980001	Sg4
21	chr2L	996706	996742	chr2L	1005826	1005862	roo	6	9118	1.0	2.0	1.5	2.4	9156	chr2L	996706	intergenic	not near genes	chr2L	1001284	intergenic	not near genes	chr2L	1005862	intergenic	not near genes	chr2L_6_1000001	chr2L_1000001	Sg4
27	chr2L	1220107	1220152	chr2L	1227598	1227643	blood	13	7491	9.0	6.0	7.5	1.5	7536	chr2L	1220107	intron	CG42329 +	chr2L	1223875	intron	CG42329 +	chr2L	1227643	intron	CG42329 +	chr2L_13_1220001	chr2L_1220001	Sg4
35	chr2L	1570669	1570717	chr2L	1573566	1573614	F-element	16	2896	5.5	5.5	5.5	2.5	2945	chr2L	1570669	intron	haf +	chr2L	1572142	intron	haf +	chr2L	1573614	intron	haf +	chr2L_16_1570001	chr2L_1570001	Sg4
39	chr2L	1678932	1679002	chr2L	1686440	1686491	blood	11	7501	0.5	3.0	1.8	3.9	7559	chr2L	1678932	intron	chinmo +	chr2L	1682712	intron	chinmo +	chr2L	1686491	intron	chinmo +	chr2L_11_1680001	chr2L_1680001	Sg4
40	chr2L	1711336	1711339	chr2L	1711685	1711688	mdg3	5	349	16.5	8.5	12.5	0.4	352	chr2L	1711336	3` UTR,3` UTR	mRpL48 +,frtz -	chr2L	1711512	3` UTR	frtz -	chr2L	1711688	3` UTR	frtz -	chr2L_5_1710001	chr2L_1710001	Sg4
41	chr2L	1711344	1711388	chr2L	1711682	1711731	mdg3	23	346	9.5	8.5	9.0	2.3	387	chr2L	1711344	3` UTR,3` UTR	mRpL48 +,frtz -	chr2L	1711538	3` UTR	frtz -	chr2L	1711731	3` UTR	frtz -	chr2L_23_1710001	chr2L_1710001	Sg4
50	chr2L	2100382	2100388	chr2L	2109546	2109554	roo	4	9168	6.5	8.0	7.2	0.5	9172	chr2L	2100382	intron	dpr3 -	chr2L	2104968	intron	dpr3 -	chr2L	2109554	intron	dpr3 -	chr2L_4_2100001	chr2L_2100001	Sg4
51	chr2L	2100389	2100405	chr2L	2109545	2109551	roo	8	9163	4.0	8.0	6.0	1.1	9162	chr2L	2100389	intron	dpr3 -	chr2L	2104970	intron	dpr3 -	chr2L	2109551	intron	dpr3 -	chr2L_8_2100001	chr2L_2100001	Sg4
52	chr2L	2112119	2112146	chr2L	2119775	2119775	opus	9	7663	1.5	6.0	3.8	1.9	7656	chr2L	2112119	intergenic	not near genes	chr2L	2115947	intergenic	not near genes	chr2L	2119775	intergenic	not near genes	chr2L_9_2115001	chr2L_2115001	Sg4
56	chr2L	2294030	2294075	chr2L	2299245	2299272	copia	19	5221	3.5	5.0	4.2	3.7	5242	chr2L	2294030	intergenic	not near genes	chr2L	2296651	intergenic	not near genes	chr2L	2299272	intergenic	not near genes	chr2L_19_2295001	chr2L_2295001	Sg4
63	chr2L	2565534	2565566	chr2L	2571620	2571659	297	9	6091	8.0	3.0	5.5	1.4	6125	chr2L	2565534	exon	Cyp309a2 -	chr2L	2568596	intron	Cyp309a2 -	chr2L	2571659	exon	Cyp309a2 -	chr2L_9_2565001	chr2L_2565001	Sg4
67	chr2L	2661183	2661227	chr2L	2663045	2663055	I-element	15	1854	3.0	5.5	4.2	2.9	1872	chr2L	2661183	intergenic	not near genes	chr2L	2662119	intergenic	not near genes	chr2L	2663055	intergenic	not near genes	chr2L_15_2660001	chr2L_2660001	Sg4
69	chr2L	2772603	2772622	chr2L	2779210	2779231	297	4	6607	4.5	8.5	6.5	0.5	6628	chr2L	2772603	3` UTR	Syt1 -	chr2L	2775917	intron	Syt1 -	chr2L	2779231	3` UTR	Syt1 -	chr2L_4_2775001	chr2L_2775001	Sg4
75	chr2L	3073009	3073054	chr2L	3078237	3078282	copia	14	5227	7.0	4.5	5.8	2.1	5273	chr2L	3073009	intron	toc -	chr2L	3075646	intron	toc -	chr2L	3078282	intron	toc -	chr2L_14_3075001	chr2L_3075001	Sg4
84	chr2L	3202721	3202761	chr2L	3210175	3210211	mdg1	17	7453	3.0	6.5	4.8	2.9	7490	chr2L	3202721	intergenic	not near genes	chr2L	3206466	intergenic	not near genes	chr2L	3210211	intergenic	CR45336 +	chr2L_17_3205001	chr2L_3205001	Sg4
86	chr2L	3251479	3251519	chr2L	3259059	3259109	springer	10	7588	4.0	4.0	4.0	2.0	7630	chr2L	3251479	intergenic	not near genes	chr2L	3255294	intergenic	not near genes	chr2L	3259109	intergenic	not near genes	chr2L_10_3255001	chr2L_3255001	Sg4
90	chr2L	3388585	3388622	chr2L	3388848	3388887	pogo	5	265	1.0	3.5	2.2	1.6	302	chr2L	3388585	intergenic	CG42460 -	chr2L	3388736	intergenic	CG42460 -	chr2L	3388887	intergenic	CG42460 -,CR44791 +	chr2L_5_3385001	chr2L_3385001	Sg4
108	chr2L	4181301	4181303	chr2L	4183958	4183960	Burdock	4	2657	4.5	18.0	11.2	0.3	2659	chr2L	4181301	intergenic	not near genes	chr2L	4182630	intergenic	not near genes	chr2L	4183960	intergenic	not near genes	chr2L_4_4180001	chr2L_4180001	Sg4
110	chr2L	4661824	4661853	chr2L	4669429	4669458	opus	9	7605	5.5	5.0	5.2	1.5	7634	chr2L	4661824	intergenic	not near genes	chr2L	4665641	intergenic	not near genes	chr2L	4669458	intergenic	not near genes	chr2L_9_4665001	chr2L_4665001	Sg4
127	chr2L	6279620	6279653	chr2L	6279724	6279757	INE-1	11	104	4.0	0.0	2.0	3.7	137	chr2L	6279620	intron	Ddr +	chr2L	6279688	intron	Ddr +	chr2L	6279757	intron	Ddr +	chr2L_11_6275001	chr2L_6275001	Sg4
133	chr2L	6363125	6363174	chr2L	6366076	6366125	Burdock	20	2951	2.5	4.5	3.5	4.4	3000	chr2L	6363125	intergenic	not near genes	chr2L	6364625	intergenic	not near genes	chr2L	6366125	intergenic	not near genes	chr2L_20_6360001	chr2L_6360001	Sg4
134	chr2L	6426834	6426882	chr2L	6445119	6445131	roo	17	18283	4.5	7.5	6.0	2.4	18297	chr2L	6426834	3` UTR	CG9527 -	chr2L	6435982	intron	CG9527 -	chr2L	6445131	exon	CG9527 -	chr2L_17_6435001	chr2L_6435001	Sg4
156	chr2L	7343302	7343352	chr2L	7350443	7350493	roo	20	7141	5.0	7.5	6.2	2.8	7191	chr2L	7343302	intron	Wnt6 +	chr2L	7346898	intron	Wnt6 +	chr2L	7350493	intron	Wnt6 +	chr2L_20_7345001	chr2L_7345001	Sg4
168	chr2L	7959019	7959072	chr2L	7960455	7960510	pogo	9	1436	4.5	2.5	3.5	2.0	1491	chr2L	7959019	intron	Snoo -	chr2L	7959764	intron	Snoo -	chr2L	7960510	intron	Snoo -	chr2L_9_7955001	chr2L_7955001	Sg4
169	chr2L	7977079	7977112	chr2L	7984080	7984113	297	11	7000	6.0	6.0	6.0	1.6	7034	chr2L	7977079	intron	Snoo -	chr2L	7980596	intron	Snoo -	chr2L	7984113	intron,5` UTR	Snoo -,CG7231 +	chr2L_11_7980001	chr2L_7980001	Sg4
172	chr2L	8013597	8013606	chr2L	8018826	8018835	copia	7	5229	8.0	0.0	4.0	1.4	5238	chr2L	8013597	intron	Tg +	chr2L	8016216	intron	Tg +	chr2L	8018835	intron	Tg +	chr2L_7_8015001	chr2L_8015001	Sg4
180	chr2L	8452398	8452447	chr2L	8461594	8461632	roo	14	9195	2.5	7.0	4.8	2.4	9234	chr2L	8452398	intron	fu12 -	chr2L	8457015	intron	fu12 -	chr2L	8461632	intron	fu12 -	chr2L_14_8455001	chr2L_8455001	Sg4
182	chr2L	8594442	8594477	chr2L	8601521	8601556	297	8	7079	3.5	2.5	3.0	2.0	7114	chr2L	8594442	intron,3` UTR	Sema-1a +,CR43855 -	chr2L	8597999	intron	Sema-1a +	chr2L	8601556	intron	Sema-1a +	chr2L_8_8595001	chr2L_8595001	Sg4
187	chr2L	8723093	8723135	chr2L	8731495	8731537	Tirant	9	8402	4.0	7.5	5.8	1.3	8444	chr2L	8723093	intron	raw -	chr2L	8727315	intron	raw -	chr2L	8731537	intron	raw -	chr2L_9_8725001	chr2L_8725001	Sg4
197	chr2L	9000259	9000302	chr2L	9007794	9007837	roo	14	7535	3.5	1.0	2.2	4.4	7578	chr2L	9000259	intergenic	Try29F +	chr2L	9004048	intergenic	not near genes	chr2L	9007837	intergenic	not near genes	chr2L_14_9000001	chr2L_9000001	Sg4
212	chr2L	9393473	9393524	chr2L	9396465	9396516	jockey	9	2991	2.0	1.5	1.8	3.2	3043	chr2L	9393473	intron	Shawl -	chr2L	9394994	intron	Shawl -	chr2L	9396516	intron	Shawl -	chr2L_9_9390001	chr2L_9390001	Sg4
235	chr2L	9973701	9973757	chr2L	9980845	9980901	HMS-Beagle	22	7142	5.0	4.5	4.8	3.8	7200	chr2L	9973701	intergenic	not near genes	chr2L	9977301	intergenic	not near genes	chr2L	9980901	intergenic	not near genes	chr2L_22_9975001	chr2L_9975001	Sg4
240	chr2L	10156212	10156266	chr2L	10164087	10164141	blood	16	7872	4.5	3.5	4.0	3.2	7929	chr2L	10156212	intron,3` UTR	CG44153 -,CG4839 +	chr2L	10160176	intron	CG44153 -	chr2L	10164141	intron	CG44153 -	chr2L_16_10160001	chr2L_10160001	Sg4
256	chr2L	10592818	10592855	chr2L	10600504	10600533	opus	6	7685	3.0	4.0	3.5	1.3	7715	chr2L	10592818	intron	Trim9 +	chr2L	10596676	intron	Trim9 +	chr2L	10600533	intron	Trim9 +	chr2L_6_10595001	chr2L_10595001	Sg4
261	chr2L	10862862	10862869	chr2L	10864451	10864508	Rt1c	4	1621	4.5	4.5	4.5	0.7	1646	chr2L	10862862	3` UTR	CR43807 -	chr2L	10863685	intron	CR43807 -	chr2L	10864508	3` UTR	CR43807 -	chr2L_4_10860001	chr2L_10860001	Sg4
263	chr2L	10946929	10946969	chr2L	10956169	10956209	roo	17	9240	5.5	8.0	6.8	2.2	9280	chr2L	10946929	intron	dpr2 -	chr2L	10951569	intron	dpr2 -	chr2L	10956209	intron	dpr2 -	chr2L_17_10950001	chr2L_10950001	Sg4
274	chr2L	11315245	11315272	chr2L	11317674	11317701	G2	8	2428	2.0	2.0	2.0	2.7	2456	chr2L	11315245	intergenic	not near genes	chr2L	11316473	intergenic	not near genes	chr2L	11317701	intergenic	not near genes	chr2L_8_11315001	chr2L_11315001	Sg4
283	chr2L	11563618	11563659	chr2L	11568847	11568888	copia	12	5228	6.0	4.0	5.0	2.0	5270	chr2L	11563618	intergenic	not near genes	chr2L	11566253	intergenic	not near genes	chr2L	11568888	intergenic	not near genes	chr2L_12_11565001	chr2L_11565001	Sg4
284	chr2L	11614038	11614063	chr2L	11615557	11615562	hopper2	4	1510	4.0	3.0	3.5	0.9	1524	chr2L	11614038	intron	kek2 +	chr2L	11614800	intron	kek2 +	chr2L	11615562	intron	kek2 +	chr2L_4_11610001	chr2L_11610001	Sg4
285	chr2L	11614071	11614085	chr2L	11615550	11615605	hopper2	4	1505	1.0	2.0	1.5	1.6	1534	chr2L	11614071	intron	kek2 +	chr2L	11614838	intron	kek2 +	chr2L	11615605	intron	kek2 +	chr2L_4_11610001	chr2L_11610001	Sg4
288	chr2L	11713505	11713521	chr2L	11720973	11721014	blood	7	7486	5.0	3.5	4.2	1.3	7509	chr2L	11713505	intergenic	not near genes	chr2L	11717260	intergenic	not near genes	chr2L	11721014	intergenic	CR44143 +	chr2L_7_11715001	chr2L_11715001	Sg4
298	chr2L	12067318	12067349	chr2L	12074395	12074426	297	9	7077	2.0	3.5	2.8	2.4	7108	chr2L	12067318	intergenic	not near genes	chr2L	12070872	intergenic	not near genes	chr2L	12074426	intergenic	not near genes	chr2L_9_12070001	chr2L_12070001	Sg4
310	chr2L	12558306	12558344	chr2L	12565449	12565498	HMS-Beagle	9	7151	1.0	2.5	1.8	3.2	7192	chr2L	12558306	intergenic	not near genes	chr2L	12561902	intergenic	not near genes	chr2L	12565498	intergenic	not near genes	chr2L_9_12560001	chr2L_12560001	Sg4
312	chr2L	12728900	12728947	chr2L	12729165	12729212	pogo	11	265	5.0	3.0	4.0	2.2	312	chr2L	12728900	intron	MRP +	chr2L	12729056	intron	MRP +	chr2L	12729212	exon	MRP +	chr2L_11_12725001	chr2L_12725001	Sg4
313	chr2L	12731036	12731078	chr2L	12735828	12735859	F-element	7	4789	6.0	3.5	4.8	1.2	4823	chr2L	12731036	intron	MRP +	chr2L	12733448	intron	MRP +	chr2L	12735859	intron	MRP +	chr2L_7_12730001	chr2L_12730001	Sg4
314	chr2L	12739163	12739196	chr2L	12743968	12744002	Doc	14	4805	3.0	6.0	4.5	2.5	4839	chr2L	12739163	exon	MRP +	chr2L	12741582	intron	MRP +	chr2L	12744002	exon	MRP +	chr2L_14_12740001	chr2L_12740001	Sg4
319	chr2L	12861677	12861728	chr2L	12863169	12863203	hobo	13	1490	3.5	6.0	4.8	2.2	1526	chr2L	12861677	intergenic	not near genes	chr2L	12862440	intergenic	not near genes	chr2L	12863203	intergenic	not near genes	chr2L_13_12860001	chr2L_12860001	Sg4
320	chr2L	12894005	12894037	chr2L	12895497	12895529	hobo	11	1492	7.5	7.5	7.5	1.3	1524	chr2L	12894005	intergenic	not near genes	chr2L	12894767	intergenic	not near genes	chr2L	12895529	intergenic	not near genes	chr2L_11_12890001	chr2L_12890001	Sg4
323	chr2L	12933827	12933876	chr2L	12941319	12941368	blood	15	7491	4.0	7.0	5.5	2.3	7541	chr2L	12933827	intergenic	not near genes	chr2L	12937598	intergenic	not near genes	chr2L	12941368	intergenic	not near genes	chr2L_15_12935001	chr2L_12935001	Sg4
331	chr2L	13405634	13405679	chr2L	13410452	13410501	Doc	7	4820	8.5	3.0	5.8	1.0	4867	chr2L	13405634	exon	CG7110 +	chr2L	13408068	intron	CG7110 +	chr2L	13410501	intron	CG7110 +	chr2L_7_13405001	chr2L_13405001	Sg4
332	chr2L	13449445	13449496	chr2L	13456899	13456957	Quasimodo	9	7460	3.0	5.5	4.2	1.7	7512	chr2L	13449445	intron,5` UTR	CG42784 +,Hsp60D -	chr2L	13453201	intron	CG42784 +	chr2L	13456957	intron	CG42784 +	chr2L_9_13450001	chr2L_13450001	Sg4
333	chr2L	13481433	13481465	chr2L	13482065	13482097	jockey	10	632	5.0	7.5	6.2	1.4	664	chr2L	13481433	intron	CG42784 +	chr2L	13481765	intron	CG42784 +	chr2L	13482097	intron	CG42784 +	chr2L_10_13480001	chr2L_13480001	Sg4
336	chr2L	13560378	13560410	chr2L	13565224	13565256	F-element	8	4846	2.5	3.5	3.0	2.0	4878	chr2L	13560378	intron	kuz +	chr2L	13562817	intron	kuz +	chr2L	13565256	intron	kuz +	chr2L_8_13560001	chr2L_13560001	Sg4
342	chr2L	13761787	13761828	chr2L	13762923	13762964	Doc	7	1136	4.0	4.0	4.0	1.4	1177	chr2L	13761787	intron	TM9SF4 +	chr2L	13762376	intron	TM9SF4 +	chr2L	13762964	intron	TM9SF4 +	chr2L_7_13760001	chr2L_13760001	Sg4
343	chr2L	13853072	13853104	chr2L	13862246	13862279	roo	9	9174	6.5	5.5	6.0	1.3	9207	chr2L	13853072	intron	CenG1A +	chr2L	13857676	intron	CenG1A +	chr2L	13862279	intron	CenG1A +	chr2L_9_13855001	chr2L_13855001	Sg4
360	chr2L	14642550	14642592	chr2L	14651738	14651780	roo	12	9188	3.0	7.5	5.2	1.9	9230	chr2L	14642550	intron	osp -	chr2L	14647165	intron	osp -	chr2L	14651780	intron	osp -	chr2L_12_14645001	chr2L_14645001	Sg4
367	chr2L	14803861	14803904	chr2L	14809089	14809132	copia	15	5228	6.0	4.5	5.2	2.4	5271	chr2L	14803861	intergenic	not near genes	chr2L	14806496	intergenic	not near genes	chr2L	14809132	intergenic	not near genes	chr2L_15_14805001	chr2L_14805001	Sg4
373	chr2L	14889931	14889977	chr2L	14890381	14890427	jockey	7	449	3.5	5.0	4.2	1.3	496	chr2L	14889931	intergenic	not near genes	chr2L	14890179	intergenic	not near genes	chr2L	14890427	intergenic	not near genes	chr2L_7_14890001	chr2L_14890001	Sg4
374	chr2L	14984362	14984405	chr2L	14991989	14992032	opus	10	7627	3.0	3.5	3.2	2.4	7670	chr2L	14984362	intron	mol -	chr2L	14988197	intron	mol -	chr2L	14992032	intron	mol -	chr2L_10_14985001	chr2L_14985001	Sg4
387	chr2L	15446026	15446075	chr2L	15453520	15453569	blood	13	7494	3.0	2.5	2.8	3.4	7543	chr2L	15446026	intergenic	not near genes	chr2L	15449798	intergenic	not near genes	chr2L	15453569	intergenic	not near genes	chr2L_13_15445001	chr2L_15445001	Sg4
390	chr2L	15586390	15586433	chr2L	15593462	15593509	297	4	7075	1.5	1.5	1.5	1.6	7119	chr2L	15586390	intergenic	not near genes	chr2L	15589950	intergenic	not near genes	chr2L	15593509	intergenic	not near genes	chr2L_4_15585001	chr2L_15585001	Sg4
393	chr2L	15826871	15826879	chr2L	15829290	15829298	Tabor	4	2418	0.0	3.5	1.8	1.4	2427	chr2L	15826871	intergenic	not near genes	chr2L	15828084	intergenic	not near genes	chr2L	15829298	intergenic	not near genes	chr2L_4_15825001	chr2L_15825001	Sg4
395	chr2L	15956016	15956057	chr2L	15957508	15957534	hobo	10	1484	3.5	5.0	4.2	1.9	1518	chr2L	15956016	intron	beat-Ib -	chr2L	15956775	intron	beat-Ib -	chr2L	15957534	intron	beat-Ib -	chr2L_10_15955001	chr2L_15955001	Sg4
397	chr2L	16071771	16071771	chr2L	16217660	16217660	copia	19	145889	25.0	20.0	22.5	0.8	145889	chr2L	16071771	intron	beat-Ia +	chr2L	16144716	intergenic	not near genes	chr2L	16217660	intergenic	not near genes	chr2L_19_16140001	chr2L_16140001	Sg4
398	chr2L	16141148	16141194	chr2L	16146380	16146426	copia	15	5232	5.5	6.5	6.0	2.1	5278	chr2L	16141148	intergenic	not near genes	chr2L	16143787	intergenic	not near genes	chr2L	16146426	intergenic	not near genes	chr2L_15_16140001	chr2L_16140001	Sg4
399	chr2L	16153715	16153767	chr2L	16160794	16160846	297	20	7078	6.0	8.5	7.2	2.4	7131	chr2L	16153715	intergenic	not near genes	chr2L	16157280	intergenic	not near genes	chr2L	16160846	intergenic	not near genes	chr2L_20_16155001	chr2L_16155001	Sg4
402	chr2L	16071771	16071771	chr2L	16217660	16217660	copia	15	145889	25.0	20.0	22.5	0.6	145889	chr2L	16071771	intron	beat-Ia +	chr2L	16144716	intergenic	not near genes	chr2L	16217660	intergenic	not near genes	chr2L_15_16140001	chr2L_16140001	Sg4
404	chr2L	16280235	16280285	chr2L	16281431	16281481	1360	19	1195	4.0	5.5	4.8	3.3	1246	chr2L	16280235	intron	crp -	chr2L	16280858	intron	crp -	chr2L	16281481	intron	crp -	chr2L_19_16280001	chr2L_16280001	Sg4
410	chr2L	16511944	16511989	chr2L	16519083	16519128	HMS-Beagle	11	7139	0.5	1.5	1.0	5.5	7184	chr2L	16511944	intron	CG5953 -	chr2L	16515536	intron	CG5953 -	chr2L	16519128	intron	CG5953 -	chr2L_11_16515001	chr2L_16515001	Sg4
416	chr2L	16958083	16958134	chr2L	16962896	16962947	Doc	9	4813	2.0	3.5	2.8	2.4	4864	chr2L	16958083	intergenic	not near genes	chr2L	16960515	intergenic	not near genes	chr2L	16962947	intergenic	not near genes	chr2L_9_16960001	chr2L_16960001	Sg4
427	chr2L	17167541	17167595	chr2L	17167807	17167861	pogo	13	265	3.0	3.5	3.2	3.1	320	chr2L	17167541	intron,intron	CG34106 +,beat-IIIa +	chr2L	17167701	intron,intron	CG34106 +,beat-IIIa +	chr2L	17167861	intron,intron	CG34106 +,beat-IIIa +	chr2L_13_17165001	chr2L_17165001	Sg4
428	chr2L	17199144	17199181	chr2L	17200636	17200673	hobo	4	1492	2.0	0.0	1.0	2.0	1529	chr2L	17199144	intron	beat-IIIc -	chr2L	17199908	intron	beat-IIIc -	chr2L	17200673	intron	beat-IIIc -	chr2L_4_17195001	chr2L_17195001	Sg4
429	chr2L	17273172	17273220	chr2L	17277980	17278028	F-element	16	4808	3.0	4.5	3.8	3.3	4856	chr2L	17273172	intergenic	not near genes	chr2L	17275600	intergenic	not near genes	chr2L	17278028	intergenic	not near genes	chr2L_16_17275001	chr2L_17275001	Sg4
442	chr2L	17687491	17687515	chr2L	17692261	17692285	F-element	7	4770	4.5	2.5	3.5	1.6	4794	chr2L	17687491	intron	CadN -	chr2L	17689888	intron	CadN -	chr2L	17692285	intron	CadN -	chr2L_7_17685001	chr2L_17685001	Sg4
443	chr2L	17727844	17727868	chr2L	17729336	17729340	hobo	4	1487	1.5	6.5	4.0	0.8	1496	chr2L	17727844	intron	CadN -	chr2L	17728592	intron	CadN -	chr2L	17729340	intron	CadN -	chr2L_4_17725001	chr2L_17725001	Sg4
445	chr2L	17819899	17819956	chr2L	17825125	17825179	copia	17	5227	2.5	1.5	2.0	5.7	5280	chr2L	17819899	intron	CadN2 -	chr2L	17822539	intron	CadN2 -	chr2L	17825179	intron	CadN2 -	chr2L_17_17820001	chr2L_17820001	Sg4
451	chr2L	17911938	17911988	chr2L	17914143	17914199	pogo	18	2210	5.0	4.5	4.8	3.1	2261	chr2L	17911938	intergenic	not near genes	chr2L	17913068	intergenic	not near genes	chr2L	17914199	intergenic	CG43271 -	chr2L_18_17910001	chr2L_17910001	Sg4
454	chr2L	17951927	17951970	chr2L	17953419	17953462	hobo	9	1492	2.0	2.5	2.2	2.8	1535	chr2L	17951927	intergenic	CR44398 -,CR44397 -	chr2L	17952694	intergenic	not near genes	chr2L	17953462	intergenic	not near genes	chr2L_9_17950001	chr2L_17950001	Sg4
456	chr2L	18051868	18051894	chr2L	18061040	18061065	roo	7	9172	6.5	7.0	6.8	0.9	9197	chr2L	18051868	intron	rdo +	chr2L	18056466	intron	rdo +	chr2L	18061065	intron	rdo +	chr2L_7_18055001	chr2L_18055001	Sg4
463	chr2L	18408006	18408050	chr2L	18412815	18412859	Doc	8	4809	8.5	5.5	7.0	1.0	4853	chr2L	18408006	intergenic	not near genes	chr2L	18410432	intergenic	not near genes	chr2L	18412859	intergenic	not near genes	chr2L_8_18410001	chr2L_18410001	Sg4
477	chr2L	19147352	19147392	chr2L	19154412	19154452	297	4	7057	5.5	7.0	6.2	0.6	7100	chr2L	19147352	intron	brat +	chr2L	19150902	intron	brat +	chr2L	19154452	intron	brat +	chr2L_4_19150001	chr2L_19150001	Sg4
481	chr2L	19345007	19345040	chr2L	19357241	19357274	blood	7	12233	1.0	7.0	4.0	1.4	12267	chr2L	19345007	intron	dnt -	chr2L	19351140	intron	dnt -	chr2L	19357274	intron	dnt -	chr2L_7_19350001	chr2L_19350001	Sg4
487	chr2L	19620073	19620124	chr2L	19621087	19621138	jockey	15	1012	6.5	3.0	4.8	2.6	1065	chr2L	19620073	intron	Lar +	chr2L	19620606	intron	Lar +	chr2L	19621138	intron	Lar +	chr2L_15_19620001	chr2L_19620001	Sg4
488	chr2L	19652543	19652599	chr2L	19674004	19674054	opus	11	21456	1.0	4.0	2.5	3.1	21511	chr2L	19652543	intron	Lar +	chr2L	19663298	intron	Lar +	chr2L	19674054	intron	Lar +	chr2L_11_19660001	chr2L_19660001	Sg4
492	chr2L	19703519	19703568	chr2L	19712680	19712728	roo	12	9157	5.5	2.5	4.0	2.4	9209	chr2L	19703519	intron	Lar +	chr2L	19708124	intron	Lar +	chr2L	19712728	intron	Lar +	chr2L_12_19705001	chr2L_19705001	Sg4
493	chr2L	19737353	19737387	chr2L	19740837	19740841	1360	14	3486	3.0	6.0	4.5	2.5	3488	chr2L	19737353	intergenic	Nf-YB +	chr2L	19739097	intergenic	not near genes	chr2L	19740841	intergenic	not near genes	chr2L_14_19735001	chr2L_19735001	Sg4
494	chr2L	19762782	19762837	chr2L	19763049	19763104	pogo	10	266	7.0	2.5	4.8	1.7	322	chr2L	19762782	exon	fbp -	chr2L	19762943	intron	fbp -	chr2L	19763104	intron	fbp -	chr2L_10_19760001	chr2L_19760001	Sg4
502	chr2L	20005850	20005902	chr2L	20010951	20011003	flea	12	5101	1.5	4.0	2.8	3.2	5153	chr2L	20005850	intron	CG43861 -	chr2L	20008426	intron	CG43861 -	chr2L	20011003	intron	CG43861 -	chr2L_12_20005001	chr2L_20005001	Sg4
510	chr2L	20272095	20272142	chr2L	20282831	20282878	copia	10	10736	2.5	4.0	3.2	2.4	10783	chr2L	20272095	intergenic	not near genes	chr2L	20277486	intergenic	not near genes	chr2L	20282878	intergenic	not near genes	chr2L_10_20275001	chr2L_20275001	Sg4
514	chr2L	20302249	20302304	chr2L	20311728	20311776	blood	7	9477	4.5	6.5	5.5	1.1	9527	chr2L	20302249	intergenic	not near genes	chr2L	20307012	intergenic	not near genes	chr2L	20311776	5` UTR	spir +	chr2L_7_20305001	chr2L_20305001	Sg4
522	chr2L	20568655	20568687	chr2L	20569070	20569091	X-element	7	413	4.0	10.0	7.0	0.9	436	chr2L	20568655	intron	CR45347 +	chr2L	20568873	intron	CR45347 +	chr2L	20569091	intron	CR45347 +	chr2L_7_20565001	chr2L_20565001	Sg4
523	chr2L	20576216	20576239	chr2L	20583710	20583733	blood	4	7494	1.0	6.5	3.8	0.8	7517	chr2L	20576216	intergenic	CR45347 +	chr2L	20579974	intergenic	not near genes	chr2L	20583733	3` UTR	CR44909 -	chr2L_4_20575001	chr2L_20575001	Sg4
526	chr2L	20639490	20639532	chr2L	20639791	20639833	INE-1	9	301	4.0	5.5	4.8	1.6	343	chr2L	20639490	intergenic	not near genes	chr2L	20639662	intergenic	CG31680 +	chr2L	20639833	intergenic	CG31680 +	chr2L_9_20635001	chr2L_20635001	Sg4
532	chr2L	20835791	20835840	chr2L	20836533	20836582	Quasimodo	10	742	1.0	4.5	2.8	2.6	791	chr2L	20835791	5` UTR	Oseg5 -	chr2L	20836186	intergenic	Oseg5 -,Spn38F -	chr2L	20836582	intergenic	Spn38F -	chr2L_10_20835001	chr2L_20835001	Sg4
536	chr2L	20891525	20891545	chr2L	20896651	20896671	jockey	6	5126	3.5	3.5	3.5	1.3	5146	chr2L	20891525	intron,intron	CG43739 -,sky -	chr2L	20894098	intron,intron	CG43739 -,sky -	chr2L	20896671	intron,intron	CG43739 -,sky -	chr2L_6_20890001	chr2L_20890001	Sg4
537	chr2L	20901428	20901439	chr2L	20902617	20902628	1360	5	1189	12.0	2.5	7.2	0.6	1200	chr2L	20901428	intron,intron	CG43739 -,sky -	chr2L	20902028	intron,intron	CG43739 -,sky -	chr2L	20902628	intron,intron	CG43739 -,sky -	chr2L_5_20900001	chr2L_20900001	Sg4
539	chr2L	19505799	19505833	chr2L	20914118	20914152	1360	10	1408321	29.5	14.0	21.8	0.4	1408353	chr2L	19505799	exon	CG10188 -	chr2L	20209976	intergenic	not near genes	chr2L	20914152	intron,intron	CG43739 -,sky -	chr2L_10_20205001	chr2L_20205001	Sg4
543	chr2L	20976638	20976666	chr2L	20981478	20981506	X-element	5	4840	1.5	4.5	3.0	1.2	4868	chr2L	20976638	intron	CG42238 -	chr2L	20979072	intron	CG42238 -	chr2L	20981506	intron	CG42238 -	chr2L_5_20975001	chr2L_20975001	Sg4
545	chr2L	21020252	21020299	chr2L	21023954	21024001	NOF	8	3701	3.5	5.5	4.5	1.5	3749	chr2L	21020252	intron	CG42238 -	chr2L	21022126	intron	CG42238 -	chr2L	21024001	intron	CG42238 -	chr2L_8_21020001	chr2L_21020001	Sg4
546	chr2L	21041112	21041157	chr2L	21049398	21049422	Tirant	9	8284	3.0	2.5	2.8	2.4	8310	chr2L	21041112	intron	CG42238 -	chr2L	21045267	intron	CG42238 -	chr2L	21049422	intron	CG42238 -	chr2L_9_21045001	chr2L_21045001	Sg4
553	chr2L	21347527	21347578	chr2L	21355024	21355074	blood	11	7497	2.5	1.5	2.0	3.7	7547	chr2L	21347527	intron	Tsp39D +	chr2L	21351300	intron	Tsp39D +	chr2L	21355074	intron	Tsp39D +	chr2L_11_21350001	chr2L_21350001	Sg4
555	chr2L	21597031	21597043	chr2L	21604800	21604812	roo	4	7768	6.5	4.0	5.2	0.6	7781	chr2L	21597031	intergenic	not near genes	chr2L	21600922	intergenic	not near genes	chr2L	21604812	intergenic	not near genes	chr2L_4_21600001	chr2L_21600001	Sg4
556	chr2L	21691808	21691840	chr2L	21698303	21698305	Burdock	4	6488	2.5	1.0	1.8	1.4	6497	chr2L	21691808	intron	CG31619 +	chr2L	21695056	intron	CG31619 +	chr2L	21698305	intron	CG31619 +	chr2L_4_21695001	chr2L_21695001	Sg4
566	chr2L	21981667	21981704	chr2L	21990857	21990884	roo	8	9189	2.5	4.0	3.2	1.9	9217	chr2L	21981667	exon	CG2528 -	chr2L	21986276	intron	CG2528 -	chr2L	21990884	exon	CG2528 -	chr2L_8_21985001	chr2L_21985001	Sg4
576	chr2L	22258596	22258641	chr2L	22260745	22260790	G6	17	2149	3.5	5.0	4.2	3.3	2194	chr2L	22258596	intergenic	Tif-IA +	chr2L	22259693	intergenic	not near genes	chr2L	22260790	intergenic	not near genes	chr2L_17_22255001	chr2L_22255001	Sg4
579	chr2L	22581951	22582002	chr2L	22583765	22583816	S-element	6	1814	1.5	3.0	2.2	1.9	1865	chr2L	22581951	intron	CG17494 +	chr2L	22582884	intron	CG17494 +	chr2L	22583816	intron	CG17494 +	chr2L_6_22580001	chr2L_22580001	Sg4
581	chr2L	22776399	22776435	chr2L	22778213	22778249	S-element	6	1814	3.0	0.5	1.8	2.1	1850	chr2L	22776399	intergenic	not near genes	chr2L	22777324	intergenic	not near genes	chr2L	22778249	intergenic	not near genes	chr2L_6_22775001	chr2L_22775001	Sg4
583	chr2R	469945	469971	chr2R	473211	473237	F-element	4	3266	2.5	4.5	3.5	0.9	3292	chr2R	469945	intergenic	not near genes	chr2R	471591	intergenic	not near genes	chr2R	473237	intergenic	not near genes	chr2R_4_470001	chr2R_470001	Sg4
584	chr2R	529325	529350	chr2R	537960	538000	Max-element	5	8647	6.0	5.0	5.5	0.8	8675	chr2R	529325	intron	CG40378 +	chr2R	533662	intron	CG40378 +	chr2R	538000	intron	CG40378 +	chr2R_5_530001	chr2R_530001	Sg4
585	chr2R	1516580	1516599	chr2R	1521333	1521352	1731	14	4753	40.5	35.0	37.8	0.4	4772	chr2R	1516580	exon	Maf1 -	chr2R	1518966	intron	Maf1 -	chr2R	1521352	5` UTR	Maf1 -	chr2R_14_1515001	chr2R_1515001	Sg4
593	chr2R	4622948	4622988	chr2R	4624117	4624118	1360	10	1171	2.0	3.5	2.8	2.6	1170	chr2R	4622948	intergenic	CR44101 -	chr2R	4623533	intergenic	not near genes	chr2R	4624118	intergenic	not near genes	chr2R_10_4620001	chr2R_4620001	Sg4
596	chr2R	4750323	4750368	chr2R	4751505	4751526	1360	4	1176	3.5	2.0	2.8	1.1	1203	chr2R	4750323	intron	conu +	chr2R	4750924	intron	conu +	chr2R	4751526	intron	conu +	chr2R_4_4750001	chr2R_4750001	Sg4
610	chr2R	5417972	5418024	chr2R	5420629	5420681	Burdock	9	2657	2.0	2.5	2.2	2.8	2709	chr2R	5417972	intron	laccase2 +	chr2R	5419326	intron	laccase2 +	chr2R	5420681	intron	laccase2 +	chr2R_9_5415001	chr2R_5415001	Sg4
611	chr2R	5450098	5450116	chr2R	5451012	5451044	baggins	5	916	5.5	3.5	4.5	0.9	946	chr2R	5450098	intron	laccase2 +	chr2R	5450571	intron	laccase2 +	chr2R	5451044	intron	laccase2 +	chr2R_5_5450001	chr2R_5450001	Sg4
627	chr2R	5869250	5869304	chr2R	5874351	5874405	flea	20	5101	5.0	4.0	4.5	3.6	5155	chr2R	5869250	intergenic	not near genes	chr2R	5871828	intergenic	not near genes	chr2R	5874405	intergenic	not near genes	chr2R_20_5870001	chr2R_5870001	Sg4
630	chr2R	5902143	5902188	chr2R	5909727	5909772	17.6	7	7583	4.5	5.0	4.8	1.2	7629	chr2R	5902143	intron	CG43366 +	chr2R	5905958	intron	CG43366 +	chr2R	5909772	intron	CG43366 +	chr2R_7_5905001	chr2R_5905001	Sg4
634	chr2R	6096700	6096750	chr2R	6101923	6101941	BS	13	5220	6.0	7.5	6.8	1.7	5241	chr2R	6096700	intron	EcR -	chr2R	6099320	intron	EcR -	chr2R	6101941	intron	EcR -	chr2R_13_6095001	chr2R_6095001	Sg4
639	chr2R	6494507	6494544	chr2R	6499294	6499331	F-element	8	4787	6.0	1.5	3.8	1.7	4824	chr2R	6494507	intergenic	not near genes	chr2R	6496919	intergenic	not near genes	chr2R	6499331	intergenic	not near genes	chr2R_8_6495001	chr2R_6495001	Sg4
640	chr2R	6579776	6579798	chr2R	6584888	6584910	flea	5	5112	4.0	3.0	3.5	1.1	5134	chr2R	6579776	intron	jing +	chr2R	6582343	intron	jing +	chr2R	6584910	intron	jing +	chr2R_5_6580001	chr2R_6580001	Sg4
650	chr2R	6952148	6952185	chr2R	6959748	6959790	opus	9	7604	4.5	0.5	2.5	2.6	7642	chr2R	6952148	intron,intron,exon	mim -,CheB42c -,ppk25 +	chr2R	6955969	intron,intron	mim -,CheB42c -	chr2R	6959790	intron,intron	mim -,CheB42c -	chr2R_9_6955001	chr2R_6955001	Sg4
653	chr2R	7139945	7139952	chr2R	7141462	7141469	hopper2	5	1517	3.5	13.0	8.2	0.5	1524	chr2R	7139945	intergenic	not near genes	chr2R	7140707	intergenic	not near genes	chr2R	7141469	intergenic	not near genes	chr2R_5_7140001	chr2R_7140001	Sg4
655	chr2R	7196555	7196589	chr2R	7201355	7201388	F-element	7	4800	2.5	3.5	3.0	1.8	4833	chr2R	7196555	intron	pk +	chr2R	7198972	intron	pk +	chr2R	7201388	intron	pk +	chr2R_7_7195001	chr2R_7195001	Sg4
656	chr2R	7209850	7209859	chr2R	7217623	7217632	roo	5	7773	2.0	7.5	4.8	0.9	7782	chr2R	7209850	intron	pk +	chr2R	7213741	intron	pk +	chr2R	7217632	intron	pk +	chr2R_5_7210001	chr2R_7210001	Sg4
657	chr2R	7235797	7235851	chr2R	7240914	7240948	jockey	16	5114	2.5	5.0	3.8	3.3	5151	chr2R	7235797	intergenic	not near genes	chr2R	7238372	intergenic	not near genes	chr2R	7240948	intergenic	not near genes	chr2R_16_7235001	chr2R_7235001	Sg4
658	chr2R	7262181	7262208	chr2R	7269269	7269294	297	7	7086	2.5	7.5	5.0	1.2	7113	chr2R	7262181	intergenic	not near genes	chr2R	7265738	intergenic	not near genes	chr2R	7269294	intergenic	not near genes	chr2R_7_7265001	chr2R_7265001	Sg4
663	chr2R	7434873	7434908	chr2R	7439199	7439234	Juan	13	4325	15.0	7.0	11.0	1.1	4361	chr2R	7434873	intergenic	so +	chr2R	7437054	intergenic	not near genes	chr2R	7439234	intergenic	not near genes	chr2R_13_7435001	chr2R_7435001	Sg4
665	chr2R	7608383	7608444	chr2R	7613611	7613671	I-element	8	5228	3.5	0.0	1.8	2.9	5288	chr2R	7608383	intron	CG1358 -	chr2R	7611027	intron	CG1358 -	chr2R	7613671	intron	CG1358 -	chr2R_8_7610001	chr2R_7610001	Sg4
674	chr2R	7815653	7815695	chr2R	7822147	7822189	Burdock	9	6494	6.5	4.5	5.5	1.4	6536	chr2R	7815653	intergenic	CG1882 +	chr2R	7818921	intergenic	not near genes	chr2R	7822189	3` UTR	cathD -	chr2R_9_7815001	chr2R_7815001	Sg4
675	chr2R	7869191	7869200	chr2R	7873997	7874011	Doc	4	4810	5.5	4.5	5.0	0.7	4820	chr2R	7869191	intron	Dgk -	chr2R	7871601	intron	Dgk -	chr2R	7874011	intron	Dgk -	chr2R_4_7870001	chr2R_7870001	Sg4
684	chr2R	8330855	8330887	chr2R	8331352	8331398	roo	13	510	5.0	7.5	6.2	1.8	543	chr2R	8330855	intron	pdm3 +	chr2R	8331126	intron	pdm3 +	chr2R	8331398	intron	pdm3 +	chr2R_13_8330001	chr2R_8330001	Sg4
689	chr2R	8398188	8398224	chr2R	8402994	8403030	Doc	8	4804	8.5	4.0	6.2	1.1	4842	chr2R	8398188	intron	CG2121 -	chr2R	8400609	intron	CG2121 -	chr2R	8403030	intron	CG2121 -	chr2R_8_8400001	chr2R_8400001	Sg4
690	chr2R	8398226	8398241	chr2R	8402987	8403047	Doc	8	4800	4.5	3.5	4.0	1.6	4821	chr2R	8398226	intron	CG2121 -	chr2R	8400636	intron	CG2121 -	chr2R	8403047	intron	CG2121 -	chr2R_8_8400001	chr2R_8400001	Sg4
696	chr2R	8722743	8722794	chr2R	8723009	8723053	pogo	16	262	4.5	2.5	3.5	3.6	310	chr2R	8722743	intron	CG14767 -	chr2R	8722898	intron	CG14767 -	chr2R	8723053	intron	CG14767 -	chr2R_16_8720001	chr2R_8720001	Sg4
706	chr2R	9151276	9151324	chr2R	9157771	9157819	Burdock	15	6495	7.5	5.0	6.2	2.1	6543	chr2R	9151276	exon	CG30345 +	chr2R	9154548	intergenic	not near genes	chr2R	9157819	intergenic	CG8008 -	chr2R_15_9150001	chr2R_9150001	Sg4
707	chr2R	9212671	9212717	chr2R	9213182	9213228	roo	18	510	8.5	4.5	6.5	2.4	557	chr2R	9212671	intergenic	CR45309 +	chr2R	9212950	intergenic	CR45309 +	chr2R	9213228	5` UTR	CR45309 +	chr2R_18_9210001	chr2R_9210001	Sg4
719	chr2R	9726594	9726643	chr2R	9734170	9734219	17.6	11	7576	4.0	4.5	4.2	2.1	7625	chr2R	9726594	intron	sqa -	chr2R	9730406	intron	sqa -	chr2R	9734219	intron	sqa -	chr2R_11_9730001	chr2R_9730001	Sg4
720	chr2R	9871028	9871071	chr2R	9871539	9871582	roo	11	511	0.0	9.5	4.8	1.9	554	chr2R	9871028	intron	cbx -	chr2R	9871305	intron	cbx -	chr2R	9871582	intron,5` UTR	cbx -,CG18446 +	chr2R_11_9870001	chr2R_9870001	Sg4
721	chr2R	9945423	9945465	chr2R	9945634	9945686	BS	14	218	3.5	4.5	4.0	2.8	263	chr2R	9945423	intron	Mef2 -	chr2R	9945554	intron	Mef2 -	chr2R	9945686	intron	Mef2 -	chr2R_14_9945001	chr2R_9945001	Sg4
724	chr2R	10005828	10005839	chr2R	10007018	10007029	1360	5	1189	13.0	5.0	9.0	0.5	1201	chr2R	10005828	intron	Pka-R2 -	chr2R	10006428	intron	Pka-R2 -	chr2R	10007029	intron	Pka-R2 -	chr2R_5_10005001	chr2R_10005001	Sg4
725	chr2R	10005841	10005878	chr2R	10007017	10007018	1360	16	1171	5.5	5.0	5.2	2.6	1177	chr2R	10005841	intron	Pka-R2 -	chr2R	10006430	intron	Pka-R2 -	chr2R	10007018	intron	Pka-R2 -	chr2R_16_10005001	chr2R_10005001	Sg4
736	chr2R	10176854	10176903	chr2R	10186049	10186098	roo	7	9195	4.0	4.0	4.0	1.4	9244	chr2R	10176854	intron	KCNQ -	chr2R	10181476	intron	KCNQ -	chr2R	10186098	intron	KCNQ -	chr2R_7_10180001	chr2R_10180001	Sg4
751	chr2R	10622331	10622341	chr2R	10637120	10637130	mdg1	4	14789	6.5	6.5	6.5	0.5	14799	chr2R	10622331	intron	CG11883 +	chr2R	10629730	intron	CG11883 +	chr2R	10637130	intron	CG11883 +	chr2R_4_10625001	chr2R_10625001	Sg4
761	chr2R	10948026	10948062	chr2R	10955591	10955623	17.6	17	7572	0.0	7.5	3.8	3.5	7597	chr2R	10948026	intergenic	not near genes	chr2R	10951824	intergenic	not near genes	chr2R	10955623	intergenic	not near genes	chr2R_17_10950001	chr2R_10950001	Sg4
762	chr2R	11009793	11009839	chr2R	11018991	11019028	roo	7	9197	4.5	4.0	4.2	1.3	9235	chr2R	11009793	intron	luna -	chr2R	11014410	intron	luna -	chr2R	11019028	intron	luna -	chr2R_7_11010001	chr2R_11010001	Sg4
763	chr2R	11019860	11019888	chr2R	11024951	11024979	jockey	7	5089	7.5	3.5	5.5	1.1	5119	chr2R	11019860	intron	luna -	chr2R	11022420	intron	luna -	chr2R	11024979	intron	luna -	chr2R_7_11020001	chr2R_11020001	Sg4
764	chr2R	11019897	11019911	chr2R	11024943	11024944	jockey	5	5066	4.0	2.5	3.2	1.2	5047	chr2R	11019897	intron	luna -	chr2R	11022420	intron	luna -	chr2R	11024944	intron	luna -	chr2R_5_11020001	chr2R_11020001	Sg4
765	chr2R	11134092	11134140	chr2R	11134358	11134406	pogo	9	266	2.5	4.0	3.2	2.1	314	chr2R	11134092	intergenic	not near genes	chr2R	11134249	intergenic	not near genes	chr2R	11134406	intergenic	not near genes	chr2R_9_11130001	chr2R_11130001	Sg4
768	chr2R	11207794	11207843	chr2R	11208011	11208060	BS	10	216	5.0	3.5	4.2	1.9	266	chr2R	11207794	intron	shn +	chr2R	11207927	intron	shn +	chr2R	11208060	intron	shn +	chr2R_10_11205001	chr2R_11205001	Sg4
772	chr2R	11297614	11297639	chr2R	11301960	11301985	flea	10	4346	4.5	2.5	3.5	2.2	4371	chr2R	11297614	intergenic	CG42336 -	chr2R	11299800	intergenic	not near genes	chr2R	11301985	5` UTR	CG7741 +	chr2R_10_11295001	chr2R_11295001	Sg4
775	chr2R	11415506	11415549	chr2R	11418679	11418723	opus	19	3170	7.0	7.0	7.0	2.4	3217	chr2R	11415506	intron	Drip -	chr2R	11417114	intron	Drip -	chr2R	11418723	intron	Drip -	chr2R_19_11415001	chr2R_11415001	Sg4
776	chr2R	11472625	11472635	chr2R	11473847	11473857	pogo	11	1222	13.0	5.5	9.2	1.1	1232	chr2R	11472625	intergenic	not near genes	chr2R	11473241	intergenic	not near genes	chr2R	11473857	intergenic	not near genes	chr2R_11_11470001	chr2R_11470001	Sg4
777	chr2R	11472636	11472679	chr2R	11473846	11473901	pogo	14	1220	6.5	5.5	6.0	2.0	1265	chr2R	11472636	intergenic	not near genes	chr2R	11473268	intergenic	not near genes	chr2R	11473901	intergenic	not near genes	chr2R_14_11470001	chr2R_11470001	Sg4
781	chr2R	12707505	12707532	chr2R	12715884	12715923	roo	6	8389	5.0	2.0	3.5	1.3	8418	chr2R	12707505	intron	CG42663 +	chr2R	12711714	intron	CG42663 +	chr2R	12715923	intron	CG42663 +	chr2R_6_12710001	chr2R_12710001	Sg4
782	chr2R	12789274	12789327	chr2R	12797656	12797714	roo	17	8383	4.5	3.0	3.8	3.5	8440	chr2R	12789274	intron,3` UTR	sca +,CR45137 -	chr2R	12793494	intron,intron	sca +,CR45137 -	chr2R	12797714	intron,3` UTR	sca +,CR45137 -	chr2R_17_12790001	chr2R_12790001	Sg4
786	chr2R	13136821	13136862	chr2R	13141644	13141685	Doc	24	4823	5.0	8.5	6.8	3.1	4864	chr2R	13136821	exon	Cap-G +	chr2R	13139253	intron	Cap-G +	chr2R	13141685	intron	Cap-G +	chr2R_24_13135001	chr2R_13135001	Sg4
802	chr2R	14394208	14394222	chr2R	14399022	14399036	Doc	6	4814	8.5	1.5	5.0	1.0	4828	chr2R	14394208	intergenic	not near genes	chr2R	14396622	intergenic	not near genes	chr2R	14399036	intergenic	not near genes	chr2R_6_14395001	chr2R_14395001	Sg4
803	chr2R	14467289	14467325	chr2R	14476472	14476503	roo	13	9182	1.0	4.5	2.8	3.4	9214	chr2R	14467289	intergenic	not near genes	chr2R	14471896	intergenic	not near genes	chr2R	14476503	5` UTR	CR44462 +	chr2R_13_14470001	chr2R_14470001	Sg4
804	chr2R	14497368	14497405	chr2R	14498559	14498596	1360	9	1191	3.5	6.0	4.8	1.6	1228	chr2R	14497368	3` UTR	Cpsf160 -	chr2R	14497982	intron	Cpsf160 -	chr2R	14498596	3` UTR	Cpsf160 -	chr2R_9_14495001	chr2R_14495001	Sg4
811	chr2R	14889186	14889211	chr2R	14897819	14897844	Max-element	8	8633	5.0	0.0	2.5	2.3	8658	chr2R	14889186	intergenic	Cyp6a8 -	chr2R	14893515	intergenic	not near genes	chr2R	14897844	intergenic	not near genes	chr2R_8_14890001	chr2R_14890001	Sg4
816	chr2R	15004708	15004748	chr2R	15005057	15005102	jockey	14	353	4.0	4.0	4.0	2.8	394	chr2R	15004708	intergenic	not near genes	chr2R	15004905	intergenic	not near genes	chr2R	15005102	intergenic	not near genes	chr2R_14_15000001	chr2R_15000001	Sg4
818	chr2R	15015434	15015488	chr2R	15022883	15022933	mdg1	7	7446	2.5	5.5	4.0	1.4	7499	chr2R	15015434	intron	hbs +	chr2R	15019184	intron	hbs +	chr2R	15022933	intron	hbs +	chr2R_7_15015001	chr2R_15015001	Sg4
820	chr2R	15084953	15084996	chr2R	15092027	15092070	297	8	7074	7.0	3.5	5.2	1.3	7117	chr2R	15084953	intergenic	not near genes	chr2R	15088512	intergenic	not near genes	chr2R	15092070	5` UTR	CR44457 +	chr2R_8_15085001	chr2R_15085001	Sg4
822	chr2R	15119299	15119341	chr2R	15127798	15127847	Tirant	14	8503	7.0	4.5	5.8	2.1	8548	chr2R	15119299	intron	chn +	chr2R	15123573	intron	chn +	chr2R	15127847	intron	chn +	chr2R_14_15120001	chr2R_15120001	Sg4
847	chr2R	16539617	16539659	chr2R	16544851	16544893	copia	8	5233	3.5	3.5	3.5	1.8	5276	chr2R	16539617	intergenic	not near genes	chr2R	16542255	intergenic	not near genes	chr2R	16544893	intergenic	not near genes	chr2R_8_16540001	chr2R_16540001	Sg4
862	chr2R	17147221	17147258	chr2R	17152277	17152314	jockey	10	5056	5.0	5.5	5.2	1.6	5093	chr2R	17147221	intergenic	not near genes	chr2R	17149768	intergenic	not near genes	chr2R	17152314	intergenic	not near genes	chr2R_10_17145001	chr2R_17145001	Sg4
869	chr2R	17485899	17485947	chr2R	17490694	17490740	F-element	14	4794	3.0	2.5	2.8	3.7	4841	chr2R	17485899	5` UTR,intron	CG43110 -,NT5E-2 +	chr2R	17488320	intron	NT5E-2 +	chr2R	17490740	intron	NT5E-2 +	chr2R_14_17485001	chr2R_17485001	Sg4
874	chr2R	17782341	17782392	chr2R	17783569	17783620	pogo	10	1228	1.0	0.5	0.8	5.6	1279	chr2R	17782341	intergenic	CG33981 -,fab1 -	chr2R	17782980	intergenic	not near genes	chr2R	17783620	intergenic	mir-31a -	chr2R_10_17780001	chr2R_17780001	Sg4
875	chr2R	17784006	17784012	chr2R	17784270	17784276	pogo	4	264	12.5	9.5	11.0	0.3	270	chr2R	17784006	intergenic	mir-31a -	chr2R	17784141	intergenic	mir-31a -	chr2R	17784276	intergenic	mir-31a -	chr2R_4_17780001	chr2R_17780001	Sg4
876	chr2R	17784016	17784054	chr2R	17784268	17784312	pogo	14	261	7.0	9.5	8.2	1.5	296	chr2R	17784016	intergenic	mir-31a -	chr2R	17784164	intergenic	mir-31a -	chr2R	17784312	intergenic	mir-31a -	chr2R_14_17780001	chr2R_17780001	Sg4
881	chr2R	18045647	18045697	chr2R	18046024	18046074	jockey	8	377	2.0	1.0	1.5	3.2	427	chr2R	18045647	intergenic	not near genes	chr2R	18045860	intergenic	not near genes	chr2R	18046074	intergenic	CG5767 -	chr2R_8_18045001	chr2R_18045001	Sg4
882	chr2R	18111690	18111707	chr2R	18115583	18115600	F-element	4	3893	2.5	7.0	4.8	0.7	3910	chr2R	18111690	intergenic	not near genes	chr2R	18113645	intergenic	not near genes	chr2R	18115600	intergenic	not near genes	chr2R_4_18110001	chr2R_18110001	Sg4
889	chr2R	18487814	18487852	chr2R	18495290	18495347	blood	9	7477	0.5	5.5	3.0	2.2	7533	chr2R	18487814	intron	CG30116 -	chr2R	18491580	intron	CG30116 -	chr2R	18495347	intron	CG30116 -	chr2R_9_18490001	chr2R_18490001	Sg4
892	chr2R	18575808	18575826	chr2R	18581988	18582039	3S18	6	6191	2.5	5.5	4.0	1.2	6231	chr2R	18575808	intron	GEFmeso -	chr2R	18578924	intron	GEFmeso -	chr2R	18582039	intron	GEFmeso -	chr2R_6_18575001	chr2R_18575001	Sg4
893	chr2R	18590882	18590897	chr2R	18600035	18600039	roo	7	9168	2.5	7.5	5.0	1.2	9157	chr2R	18590882	intron	GEFmeso -	chr2R	18595460	intron	GEFmeso -	chr2R	18600039	intron	GEFmeso -	chr2R_7_18595001	chr2R_18595001	Sg4
915	chr2R	19715831	19715857	chr2R	19723325	19723351	blood	9	7493	8.5	9.0	8.8	0.9	7520	chr2R	19715831	intergenic	not near genes	chr2R	19719591	intergenic	not near genes	chr2R	19723351	intergenic	not near genes	chr2R_9_19715001	chr2R_19715001	Sg4
916	chr2R	19776572	19776617	chr2R	19779920	19779965	jockey	15	3348	5.0	5.0	5.0	2.5	3393	chr2R	19776572	intergenic	not near genes	chr2R	19778268	intergenic	not near genes	chr2R	19779965	intergenic	not near genes	chr2R_15_19775001	chr2R_19775001	Sg4
917	chr2R	19914825	19914870	chr2R	19922262	19922307	mdg1	5	7435	9.5	4.5	7.0	0.6	7482	chr2R	19914825	intergenic	not near genes	chr2R	19918566	intergenic	not near genes	chr2R	19922307	intergenic	not near genes	chr2R_5_19915001	chr2R_19915001	Sg4
919	chr2R	19957407	19957461	chr2R	19962634	19962688	copia	10	5226	4.0	2.0	3.0	2.5	5281	chr2R	19957407	intergenic	CG44623 +	chr2R	19960048	intergenic	not near genes	chr2R	19962688	intergenic	not near genes	chr2R_10_19960001	chr2R_19960001	Sg4
921	chr2R	20069229	20069274	chr2R	20071884	20071929	opus	14	2654	3.5	4.5	4.0	2.8	2700	chr2R	20069229	intergenic	not near genes	chr2R	20070579	intergenic	not near genes	chr2R	20071929	intergenic	not near genes	chr2R_14_20070001	chr2R_20070001	Sg4
934	chr2R	20739418	20739472	chr2R	20744211	20744265	F-element	15	4793	5.5	1.5	3.5	3.3	4847	chr2R	20739418	intron	dpr +	chr2R	20741842	intron	dpr +	chr2R	20744265	intron	dpr +	chr2R_15_20740001	chr2R_20740001	Sg4
935	chr2R	20783287	20783322	chr2R	20788084	20788119	F-element	6	4796	2.5	4.5	3.5	1.3	4832	chr2R	20783287	intergenic	not near genes	chr2R	20785703	intergenic	not near genes	chr2R	20788119	intergenic	CG43666 -	chr2R_6_20785001	chr2R_20785001	Sg4
957	chr2R	21738283	21738306	chr2R	21747448	21747491	roo	10	9172	1.5	5.0	3.2	2.4	9208	chr2R	21738283	intergenic	not near genes	chr2R	21742887	intergenic	not near genes	chr2R	21747491	intergenic	not near genes	chr2R_10_21740001	chr2R_21740001	Sg4
958	chr2R	21753061	21753108	chr2R	21753571	21753618	roo	9	510	2.5	5.5	4.0	1.8	557	chr2R	21753061	intergenic	not near genes	chr2R	21753340	intergenic	not near genes	chr2R	21753618	intergenic	not near genes	chr2R_9_21750001	chr2R_21750001	Sg4
961	chr2R	21809502	21809544	chr2R	21817767	21817809	roo	13	8264	6.0	3.0	4.5	2.4	8307	chr2R	21809502	intergenic	not near genes	chr2R	21813656	intergenic	not near genes	chr2R	21817809	intergenic	not near genes	chr2R_13_21810001	chr2R_21810001	Sg4
973	chr2R	22349672	22349684	chr2R	22351481	22351483	jockey	6	1807	14.0	6.5	10.2	0.5	1811	chr2R	22349672	intron	Liprin-gamma -	chr2R	22350578	intron	Liprin-gamma -	chr2R	22351483	intron	Liprin-gamma -	chr2R_6_22350001	chr2R_22350001	Sg4
974	chr2R	22349687	22349712	chr2R	22351476	22351521	jockey	4	1804	10.5	6.0	8.2	0.4	1834	chr2R	22349687	intron	Liprin-gamma -	chr2R	22350604	intron	Liprin-gamma -	chr2R	22351521	intron	Liprin-gamma -	chr2R_4_22350001	chr2R_22350001	Sg4
975	chr2R	22360363	22360371	chr2R	22360821	22360829	jockey	4	458	12.0	5.5	8.8	0.4	466	chr2R	22360363	intron	Liprin-gamma -	chr2R	22360596	intron	Liprin-gamma -	chr2R	22360829	intron	Liprin-gamma -	chr2R_4_22360001	chr2R_22360001	Sg4
981	chr2R	22525732	22525773	chr2R	22529312	22529353	jockey	13	3579	3.5	6.0	4.8	2.2	3621	chr2R	22525732	intron	px -	chr2R	22527542	intron	px -	chr2R	22529353	intron	px -	chr2R_13_22525001	chr2R_22525001	Sg4
985	chr2R	22580429	22580443	chr2R	22586604	22586618	diver	5	6175	0.0	3.0	1.5	2.0	6189	chr2R	22580429	intron	dnr1 -	chr2R	22583524	intron	dnr1 -	chr2R	22586618	intron	dnr1 -	chr2R_5_22580001	chr2R_22580001	Sg4
992	chr2R	22774950	22774991	chr2R	22775394	22775435	jockey	10	444	6.5	4.5	5.5	1.5	485	chr2R	22774950	intron	CG42260 -	chr2R	22775192	intron	CG42260 -	chr2R	22775435	intron	CG42260 -	chr2R_10_22775001	chr2R_22775001	Sg4
994	chr2R	22843022	22843046	chr2R	22845009	22845033	flea	4	1987	3.5	4.0	3.8	0.8	2011	chr2R	22843022	intergenic	CG9826 +	chr2R	22844028	intergenic	not near genes	chr2R	22845033	intergenic	not near genes	chr2R_4_22840001	chr2R_22840001	Sg4
1018	chr2R	23529550	23529606	chr2R	23537148	23537187	412	21	7596	6.5	12.0	9.2	2.1	7637	chr2R	23529550	intron	bw -	chr2R	23533368	intron	bw -	chr2R	23537187	exon	bw -	chr2R_21_23530001	chr2R_23530001	Sg4
1026	chr2R	23914279	23914326	chr2R	23921928	23921975	412	18	7648	7.5	5.0	6.2	2.5	7696	chr2R	23914279	exon	kcc +	chr2R	23918127	intron	kcc +	chr2R	23921975	exon	kcc +	chr2R_18_23915001	chr2R_23915001	Sg4
1031	chr2R	24147044	24147066	chr2R	24154647	24154659	412	5	7601	10.0	7.5	8.8	0.5	7615	chr2R	24147044	intron	Dat +	chr2R	24150852	intron	Dat +	chr2R	24154659	intron	Dat +	chr2R_5_24150001	chr2R_24150001	Sg4
1032	chr2R	24147069	24147074	chr2R	24154646	24154672	412	4	7595	7.5	7.5	7.5	0.5	7603	chr2R	24147069	intron	Dat +	chr2R	24150870	intron	Dat +	chr2R	24154672	intron	Dat +	chr2R_4_24150001	chr2R_24150001	Sg4
1034	chr2R	24177210	24177265	chr2R	24184720	24184775	412	12	7510	1.5	0.0	0.8	6.7	7565	chr2R	24177210	3` UTR	Nop60B +	chr2R	24180992	intron	Nop60B +	chr2R	24184775	3` UTR	Nop60B +	chr2R_12_24180001	chr2R_24180001	Sg4
1039	chr2R	24353405	24353436	chr2R	24361791	24361823	roo	7	8387	0.0	2.0	1.0	3.5	8418	chr2R	24353405	intron,intron	bs +,CR44811 -	chr2R	24357614	intron,intron	bs +,CR44811 -	chr2R	24361823	intron,intron	bs +,CR44811 -	chr2R_7_24355001	chr2R_24355001	Sg4
1040	chr2R	24647567	24647618	chr2R	24655149	24655200	412	9	7581	3.0	4.5	3.8	1.9	7633	chr2R	24647567	intergenic	not near genes	chr2R	24651384	intergenic	not near genes	chr2R	24655200	intergenic	not near genes	chr2R_9_24650001	chr2R_24650001	Sg4
1041	chr2R	24727865	24727915	chr2R	24735398	24735448	mdg1	14	7528	6.0	7.0	6.5	1.9	7583	chr2R	24727865	intron	Mid1 -	chr2R	24731656	intron	Mid1 -	chr2R	24735448	intron	Mid1 -	chr2R_14_24730001	chr2R_24730001	Sg4
1042	chr2R	24763587	24763642	chr2R	24765588	24765638	G2	25	1999	5.0	6.0	5.5	3.8	2051	chr2R	24763587	exon	CG3894 +	chr2R	24764612	intron	CG3894 +	chr2R	24765638	exon	CG3894 +	chr2R_25_24760001	chr2R_24760001	Sg4
1055	chr2R	25141635	25141682	chr2R	25159345	25159397	roo	13	17715	4.5	1.5	3.0	3.2	17762	chr2R	25141635	intergenic	not near genes	chr2R	25150516	intergenic	not near genes	chr2R	25159397	intergenic	not near genes	chr2R_13_25150001	chr2R_25150001	Sg4
1057	chr3L	110195	110241	chr3L	119387	119433	roo	5	9192	3.0	4.0	3.5	1.1	9238	chr3L	110195	intergenic	not near genes	chr3L	114814	intergenic	not near genes	chr3L	119433	intergenic	not near genes	chr3L_5_110001	chr3L_110001	Sg4
1064	chr3L	402664	402716	chr3L	409742	409794	297	16	7077	5.0	4.5	4.8	2.8	7130	chr3L	402664	intergenic	not near genes	chr3L	406229	intergenic	not near genes	chr3L	409794	intergenic	not near genes	chr3L_16_405001	chr3L_405001	Sg4
1073	chr3L	789892	789946	chr3L	790402	790457	roo	5	511	2.5	0.5	1.5	2.0	565	chr3L	789892	intergenic	not near genes	chr3L	790174	intergenic	not near genes	chr3L	790457	intergenic	not near genes	chr3L_5_790001	chr3L_790001	Sg4
1076	chr3L	857975	857991	chr3L	866481	866491	Tirant	4	8504	8.0	2.5	5.2	0.6	8516	chr3L	857975	intergenic	not near genes	chr3L	862233	intergenic	not near genes	chr3L	866491	intergenic	CG12502 +	chr3L_4_860001	chr3L_860001	Sg4
1077	chr3L	857992	858024	chr3L	866478	866519	Tirant	10	8497	5.5	2.5	4.0	2.0	8527	chr3L	857992	intergenic	not near genes	chr3L	862256	intergenic	not near genes	chr3L	866519	5` UTR	CG12502 +	chr3L_10_860001	chr3L_860001	Sg4
1081	chr3L	939753	939795	chr3L	940899	940941	jockey	15	1145	9.0	4.5	6.8	1.9	1188	chr3L	939753	intron	Glut1 +	chr3L	940347	intron	Glut1 +	chr3L	940941	intron	Glut1 +	chr3L_15_940001	chr3L_940001	Sg4
1088	chr3L	1047339	1047385	chr3L	1055176	1055212	412	9	7829	3.5	3.0	3.2	2.1	7873	chr3L	1047339	intron	bab1 -	chr3L	1051276	intron	bab1 -	chr3L	1055212	intron	bab1 -	chr3L_9_1050001	chr3L_1050001	Sg4
1089	chr3L	1154117	1154157	chr3L	1163292	1163332	roo	9	9175	2.5	2.5	2.5	2.6	9215	chr3L	1154117	intron	bab2 -	chr3L	1158724	intron	bab2 -	chr3L	1163332	intron	bab2 -	chr3L_9_1155001	chr3L_1155001	Sg4
1092	chr3L	1219577	1219618	chr3L	1227335	1227376	412	14	7750	3.5	7.0	5.2	2.3	7799	chr3L	1219577	intron	mwh +	chr3L	1223476	intron	mwh +	chr3L	1227376	intron	mwh +	chr3L_14_1220001	chr3L_1220001	Sg4
1100	chr3L	1485724	1485739	chr3L	1486918	1486929	1360	4	1192	7.5	14.5	11.0	0.3	1205	chr3L	1485724	intron	stet -	chr3L	1486326	intron	stet -	chr3L	1486929	intron	stet -	chr3L_4_1485001	chr3L_1485001	Sg4
1101	chr3L	1505979	1506032	chr3L	1513601	1513654	17.6	21	7621	4.0	2.5	3.2	5.0	7675	chr3L	1505979	intron,intron	Psa +,cue -	chr3L	1509816	intron,intron	Psa +,cue -	chr3L	1513654	intron,intron	Psa +,cue -	chr3L_21_1505001	chr3L_1505001	Sg4
1104	chr3L	1740836	1740879	chr3L	1741104	1741146	pogo	13	268	4.0	5.5	4.8	2.2	310	chr3L	1740836	intron	Gk +	chr3L	1740991	intron	Gk +	chr3L	1741146	intron	Gk +	chr3L_13_1740001	chr3L_1740001	Sg4
1111	chr3L	2447495	2447532	chr3L	2456662	2456702	roo	10	9177	2.5	2.0	2.2	3.1	9207	chr3L	2447495	intron	CG45186 +	chr3L	2452098	intron	CG45186 +	chr3L	2456702	intron	CG45186 +	chr3L_10_2450001	chr3L_2450001	Sg4
1123	chr3L	3051718	3051744	chr3L	3051985	3052011	pogo	11	267	6.5	3.5	5.0	1.8	293	chr3L	3051718	3` UTR	CG32485 +	chr3L	3051864	intergenic	CG32485 +	chr3L	3052011	intergenic	CG32485 +	chr3L_11_3050001	chr3L_3050001	Sg4
1124	chr3L	3061265	3061313	chr3L	3069867	3069921	Tirant	15	8604	3.0	3.0	3.0	3.8	8656	chr3L	3061265	intron	CG32486 -	chr3L	3065593	intron	CG32486 -	chr3L	3069921	intron	CG32486 -	chr3L_15_3065001	chr3L_3065001	Sg4
1136	chr3L	3601279	3601297	chr3L	3606615	3606633	copia	6	5336	6.5	5.5	6.0	0.9	5354	chr3L	3601279	intron	Eip63E +	chr3L	3603956	intron	Eip63E +	chr3L	3606633	intron	Eip63E +	chr3L_6_3600001	chr3L_3600001	Sg4
1137	chr3L	3601310	3601331	chr3L	3606610	3606667	copia	5	5329	3.5	4.0	3.8	1.0	5357	chr3L	3601310	intron	Eip63E +	chr3L	3603988	intron	Eip63E +	chr3L	3606667	intron	Eip63E +	chr3L_5_3600001	chr3L_3600001	Sg4
1143	chr3L	3833722	3833740	chr3L	3833982	3834006	pogo	6	265	7.0	1.5	4.2	1.2	284	chr3L	3833722	intron	enc +	chr3L	3833864	intron	enc +	chr3L	3834006	intron	enc +	chr3L_6_3830001	chr3L_3830001	Sg4
1148	chr3L	4328712	4328748	chr3L	4336235	4336271	412	6	7523	3.0	1.0	2.0	2.0	7559	chr3L	4328712	intron	Cip4 -	chr3L	4332492	intron	Cip4 -	chr3L	4336271	exon	Cip4 -	chr3L_6_4330001	chr3L_4330001	Sg4
1159	chr3L	4901113	4901144	chr3L	4907328	4907359	diver	8	6215	4.5	10.5	7.5	0.9	6246	chr3L	4901113	intergenic	CG13704 +	chr3L	4904236	intergenic	not near genes	chr3L	4907359	intergenic	not near genes	chr3L_8_4900001	chr3L_4900001	Sg4
1161	chr3L	5034136	5034186	chr3L	5043312	5043363	roo	9	9175	3.5	0.5	2.0	3.0	9227	chr3L	5034136	intron	Con -	chr3L	5038750	intron	Con -	chr3L	5043363	intron	Con -	chr3L_9_5035001	chr3L_5035001	Sg4
1162	chr3L	5045440	5045476	chr3L	5050246	5050282	Doc	6	4806	3.0	2.5	2.8	1.6	4842	chr3L	5045440	intron	Con -	chr3L	5047861	intron	Con -	chr3L	5050282	intron	Con -	chr3L_6_5045001	chr3L_5045001	Sg4
1173	chr3L	5458059	5458089	chr3L	5466673	5466716	Max-element	4	8624	5.0	3.5	4.2	0.8	8657	chr3L	5458059	intergenic	not near genes	chr3L	5462388	intergenic	not near genes	chr3L	5466716	intergenic	not near genes	chr3L_4_5460001	chr3L_5460001	Sg4
1182	chr3L	5910016	5910058	chr3L	5910282	5910324	pogo	10	266	3.0	5.5	4.2	1.9	308	chr3L	5910016	intron	CG13288 +	chr3L	5910170	intron	CG13288 +	chr3L	5910324	intron	CG13288 +	chr3L_10_5910001	chr3L_5910001	Sg4
1184	chr3L	5926305	5926336	chr3L	5926510	5926551	BS	10	213	6.5	4.0	5.2	1.6	246	chr3L	5926305	intron	Vap-33B +	chr3L	5926428	intron	Vap-33B +	chr3L	5926551	intron	Vap-33B +	chr3L_10_5925001	chr3L_5925001	Sg4
1187	chr3L	6001659	6001710	chr3L	6004384	6004420	jockey	4	2721	6.0	0.5	3.2	1.0	2761	chr3L	6001659	intron	PVRAP +	chr3L	6003040	intron	PVRAP +	chr3L	6004420	intron	PVRAP +	chr3L_4_6000001	chr3L_6000001	Sg4
1189	chr3L	6040340	6040387	chr3L	6042721	6042762	Doc	10	2380	1.0	1.5	1.2	4.5	2422	chr3L	6040340	intergenic	Jon65Aiv +	chr3L	6041551	intergenic	not near genes	chr3L	6042762	intergenic	not near genes	chr3L_10_6040001	chr3L_6040001	Sg4
1193	chr3L	6220892	6220939	chr3L	6230069	6230116	roo	10	9177	3.0	4.0	3.5	2.2	9224	chr3L	6220892	5` UTR	pncr008:3L +	chr3L	6225504	intergenic	not near genes	chr3L	6230116	intergenic	not near genes	chr3L_10_6225001	chr3L_6225001	Sg4
1196	chr3L	6334985	6335013	chr3L	6335481	6335499	297	13	495	5.0	2.0	3.5	2.9	514	chr3L	6334985	intron	CG13300 -	chr3L	6335242	intron	CG13300 -	chr3L	6335499	intron	CG13300 -	chr3L_13_6335001	chr3L_6335001	Sg4
1197	chr3L	6335014	6335038	chr3L	6335480	6335534	297	7	488	3.0	2.0	2.5	2.0	520	chr3L	6335014	intron	CG13300 -	chr3L	6335274	intron	CG13300 -	chr3L	6335534	intron	CG13300 -	chr3L_7_6335001	chr3L_6335001	Sg4
1199	chr3L	6405644	6405677	chr3L	6432133	6432166	roo	6	26489	5.0	4.0	4.5	1.1	26522	chr3L	6405644	intron	CG42747 +	chr3L	6418905	intron	CG42747 +	chr3L	6432166	intron	CG42747 +	chr3L_6_6415001	chr3L_6415001	Sg4
1202	chr3L	6620591	6620605	chr3L	6621054	6621069	Rt1c	5	464	4.0	13.0	8.5	0.5	478	chr3L	6620591	intergenic	not near genes	chr3L	6620830	intergenic	not near genes	chr3L	6621069	intergenic	not near genes	chr3L_5_6620001	chr3L_6620001	Sg4
1206	chr3L	6781105	6781154	chr3L	6783143	6783189	Doc	4	2035	0.5	0.0	0.2	3.3	2084	chr3L	6781105	intergenic	not near genes	chr3L	6782147	intergenic	not near genes	chr3L	6783189	intergenic	not near genes	chr3L_4_6780001	chr3L_6780001	Sg4
1209	chr3L	6855906	6855951	chr3L	6860716	6860761	Doc	9	4810	5.0	3.0	4.0	1.8	4855	chr3L	6855906	intergenic	not near genes	chr3L	6858334	intergenic	not near genes	chr3L	6860761	intergenic	not near genes	chr3L_9_6855001	chr3L_6855001	Sg4
1210	chr3L	6887506	6887542	chr3L	6895023	6895059	roo	8	7517	2.5	3.5	3.0	2.0	7553	chr3L	6887506	intergenic	not near genes	chr3L	6891282	intergenic	not near genes	chr3L	6895059	intergenic	not near genes	chr3L_8_6890001	chr3L_6890001	Sg4
1223	chr3L	7377295	7377341	chr3L	7380419	7380471	297	15	3128	5.0	5.5	5.2	2.4	3176	chr3L	7377295	intron	SMSr -	chr3L	7378883	intron	SMSr -	chr3L	7380471	intron	SMSr -	chr3L_15_7375001	chr3L_7375001	Sg4
1228	chr3L	7498747	7498785	chr3L	7503549	7503585	F-element	8	4802	3.5	4.5	4.0	1.6	4838	chr3L	7498747	5` UTR	CG8539 -	chr3L	7501166	intergenic	not near genes	chr3L	7503585	intergenic	not near genes	chr3L_8_7500001	chr3L_7500001	Sg4
1232	chr3L	7793696	7793735	chr3L	7800773	7800812	297	7	7077	1.0	3.5	2.2	2.2	7116	chr3L	7793696	intron	CG32369 -	chr3L	7797254	intron	CG32369 -	chr3L	7800812	intron	CG32369 -	chr3L_7_7795001	chr3L_7795001	Sg4
1238	chr3L	7886502	7886544	chr3L	7889045	7889087	Stalker4	5	2543	3.5	4.0	3.8	1.0	2585	chr3L	7886502	intron	CG32365 +	chr3L	7887794	intron	CG32365 +	chr3L	7889087	intron	CG32365 +	chr3L_5_7885001	chr3L_7885001	Sg4
1240	chr3L	7916810	7916851	chr3L	7926006	7926047	roo	9	9196	0.0	1.0	0.5	6.0	9237	chr3L	7916810	3` UTR	syd -	chr3L	7921428	intron	syd -	chr3L	7926047	3` UTR	syd -	chr3L_9_7920001	chr3L_7920001	Sg4
1242	chr3L	7985351	7985387	chr3L	7987704	7987740	NOF	11	2353	3.0	5.0	4.0	2.2	2389	chr3L	7985351	intron	nmo +	chr3L	7986546	intron	nmo +	chr3L	7987740	intron	nmo +	chr3L_11_7985001	chr3L_7985001	Sg4
1249	chr3L	8233569	8233588	chr3L	8238856	8238875	Rt1a	4	5287	5.0	7.0	6.0	0.6	5306	chr3L	8233569	intron	CG7213 -	chr3L	8236222	intron	CG7213 -	chr3L	8238875	intron,intron	CG7213 -,Dscam4 +	chr3L_4_8235001	chr3L_8235001	Sg4
1257	chr3L	8481792	8481799	chr3L	8490946	8490956	roo	4	9160	6.5	11.0	8.8	0.4	9164	chr3L	8481792	intron	CG43163 -	chr3L	8486374	intron	CG43163 -	chr3L	8490956	intron	CG43163 -	chr3L_4_8485001	chr3L_8485001	Sg4
1259	chr3L	8498296	8498321	chr3L	8505788	8505813	blood	7	7492	0.0	5.0	2.5	2.0	7517	chr3L	8498296	intron	CG43163 -	chr3L	8502054	intron	CG43163 -	chr3L	8505813	intron	CG43163 -	chr3L_7_8500001	chr3L_8500001	Sg4
1261	chr3L	8791257	8791286	chr3L	8796702	8796731	I-element	14	5445	7.5	7.5	7.5	1.6	5474	chr3L	8791257	exon	Fhos +	chr3L	8793994	intron	Fhos +	chr3L	8796731	intron	Fhos +	chr3L_14_8790001	chr3L_8790001	Sg4
1268	chr3L	9076902	9076948	chr3L	9084487	9084533	412	15	7584	8.5	7.0	7.8	1.7	7631	chr3L	9076902	exon	Tequila +	chr3L	9080718	intron	Tequila +	chr3L	9084533	exon	Tequila +	chr3L_15_9080001	chr3L_9080001	Sg4
1272	chr3L	9130531	9130570	chr3L	9134317	9134355	412	19	3784	2.5	4.5	3.5	4.2	3824	chr3L	9130531	intergenic	bol -	chr3L	9132443	intergenic	not near genes	chr3L	9134355	intergenic	Dhpr +	chr3L_19_9130001	chr3L_9130001	Sg4
1273	chr3L	9164672	9164708	chr3L	9166164	9166200	hobo	7	1492	5.0	0.0	2.5	2.0	1528	chr3L	9164672	intron	Rdl -	chr3L	9165436	intron	Rdl -	chr3L	9166200	intron	Rdl -	chr3L_7_9165001	chr3L_9165001	Sg4
1275	chr3L	9219221	9219267	chr3L	9219918	9219964	jockey	20	696	7.5	8.0	7.8	2.3	743	chr3L	9219221	intergenic	not near genes	chr3L	9219592	intergenic	not near genes	chr3L	9219964	intergenic	not near genes	chr3L_20_9215001	chr3L_9215001	Sg4
1276	chr3L	9270597	9270641	chr3L	9278377	9278403	roo	7	7776	4.0	4.0	4.0	1.4	7806	chr3L	9270597	intron	GluRIB +	chr3L	9274500	intron	GluRIB +	chr3L	9278403	exon	GluRIB +	chr3L_7_9270001	chr3L_9270001	Sg4
1277	chr3L	9501711	9501733	chr3L	9502219	9502241	roo	8	508	5.0	7.0	6.0	1.1	530	chr3L	9501711	intron	path -	chr3L	9501976	intron	path -	chr3L	9502241	intron	path -	chr3L_8_9500001	chr3L_9500001	Sg4
1281	chr3L	9526472	9526514	chr3L	9528172	9528210	Doc	5	1702	1.5	3.0	2.2	1.6	1738	chr3L	9526472	intergenic	not near genes	chr3L	9527341	intergenic	not near genes	chr3L	9528210	intergenic	not near genes	chr3L_5_9525001	chr3L_9525001	Sg4
1283	chr3L	9533727	9533762	chr3L	9541312	9541347	412	8	7584	4.5	18.0	11.2	0.7	7620	chr3L	9533727	intergenic	not near genes	chr3L	9537537	intergenic	not near genes	chr3L	9541347	intergenic	not near genes	chr3L_8_9535001	chr3L_9535001	Sg4
1284	chr3L	9571882	9571922	chr3L	9572255	9572295	jockey	7	373	3.0	2.0	2.5	2.0	413	chr3L	9571882	intron	CG42673 +	chr3L	9572088	intron	CG42673 +	chr3L	9572295	intron	CG42673 +	chr3L_7_9570001	chr3L_9570001	Sg4
1286	chr3L	9575886	9575941	chr3L	9580988	9581046	jockey	9	5100	6.0	3.0	4.5	1.6	5160	chr3L	9575886	intron	CG42673 +	chr3L	9578466	intron	CG42673 +	chr3L	9581046	intron	CG42673 +	chr3L_9_9575001	chr3L_9575001	Sg4
1292	chr3L	9929650	9929693	chr3L	9938447	9938497	roo	11	8803	1.5	4.0	2.8	2.9	8847	chr3L	9929650	intron	CG34356 +	chr3L	9934074	intron	CG34356 +	chr3L	9938497	intron	CG34356 +	chr3L_11_9930001	chr3L_9930001	Sg4
1304	chr3L	10414928	10414972	chr3L	10417320	10417369	Doc	10	2396	2.5	5.5	4.0	2.0	2441	chr3L	10414928	intergenic	CG12362 +	chr3L	10416148	intergenic	not near genes	chr3L	10417369	intergenic	not near genes	chr3L_10_10415001	chr3L_10415001	Sg4
1321	chr3L	11087043	11087088	chr3L	11088856	11088902	S-element	9	1814	3.0	3.0	3.0	2.2	1859	chr3L	11087043	intron	JIL-1 -	chr3L	11087972	intron	JIL-1 -	chr3L	11088902	intron	JIL-1 -	chr3L_9_11085001	chr3L_11085001	Sg4
1322	chr3L	11105272	11105319	chr3L	11107008	11107025	X-element	11	1733	3.5	5.5	4.5	2.0	1753	chr3L	11105272	intergenic	not near genes	chr3L	11106148	intergenic	not near genes	chr3L	11107025	3` UTR	CG32073 -	chr3L_11_11105001	chr3L_11105001	Sg4
1327	chr3L	11264448	11264487	chr3L	11271425	11271464	17.6	12	6976	6.5	2.0	4.2	2.3	7016	chr3L	11264448	intergenic	not near genes	chr3L	11267956	intergenic	not near genes	chr3L	11271464	intergenic	not near genes	chr3L_12_11265001	chr3L_11265001	Sg4
1330	chr3L	11329672	11329723	chr3L	11332897	11332953	jockey	9	3229	3.5	2.0	2.8	2.4	3281	chr3L	11329672	intergenic	not near genes	chr3L	11331312	intergenic	not near genes	chr3L	11332953	intergenic	not near genes	chr3L_9_11330001	chr3L_11330001	Sg4
1340	chr3L	11723063	11723108	chr3L	11727883	11727928	Doc	12	4820	3.0	2.0	2.5	3.4	4865	chr3L	11723063	3` UTR	Bmcp +	chr3L	11725496	intron	Bmcp +	chr3L	11727928	3` UTR	Bmcp +	chr3L_12_11725001	chr3L_11725001	Sg4
1351	chr3L	11864539	11864571	chr3L	11865848	11865891	pogo	15	1318	10.0	5.0	7.5	1.8	1352	chr3L	11864539	intron	CG44837 -	chr3L	11865215	intron	CG44837 -	chr3L	11865891	intron	CG44837 -	chr3L_15_11865001	chr3L_11865001	Sg4
1377	chr3L	12874900	12874954	chr3L	12877217	12877271	jockey	11	2317	3.0	2.5	2.8	2.9	2371	chr3L	12874900	intergenic	not near genes	chr3L	12876086	intergenic	not near genes	chr3L	12877271	intergenic	not near genes	chr3L_11_12875001	chr3L_12875001	Sg4
1380	chr3L	12919269	12919300	chr3L	12924749	12924762	Rt1c	7	5486	5.5	3.0	4.2	1.3	5493	chr3L	12919269	intergenic	not near genes	chr3L	12922016	intergenic	not near genes	chr3L	12924762	intergenic	not near genes	chr3L_7_12920001	chr3L_12920001	Sg4
1383	chr3L	12957764	12957810	chr3L	12962271	12962317	copia	8	4506	5.5	6.5	6.0	1.1	4553	chr3L	12957764	intergenic	not near genes	chr3L	12960040	intergenic	not near genes	chr3L	12962317	intergenic	not near genes	chr3L_8_12960001	chr3L_12960001	Sg4
1398	chr3L	13525137	13525186	chr3L	13532958	13533007	roo	20	7820	3.0	6.0	4.5	3.6	7870	chr3L	13525137	intergenic	not near genes	chr3L	13529072	intergenic	not near genes	chr3L	13533007	intergenic	not near genes	chr3L_20_13525001	chr3L_13525001	Sg4
1405	chr3L	13804526	13804549	chr3L	13822837	13822860	roo	5	18311	5.0	3.0	4.0	1.0	18334	chr3L	13804526	intergenic	not near genes	chr3L	13813693	intergenic	not near genes	chr3L	13822860	intergenic	not near genes	chr3L_5_13810001	chr3L_13810001	Sg4
1418	chr3L	14245554	14245587	chr3L	14245673	14245706	1360	8	119	6.5	2.5	4.5	1.5	152	chr3L	14245554	3` UTR	CR44561 -	chr3L	14245630	3` UTR	CR44561 -	chr3L	14245706	intergenic	CR44561 -,CR44560 +	chr3L_8_14245001	chr3L_14245001	Sg4
1419	chr3L	14267357	14267393	chr3L	14271822	14271822	F-element	4	4456	3.0	3.5	3.2	1.0	4465	chr3L	14267357	intergenic	not near genes	chr3L	14269590	intergenic	not near genes	chr3L	14271822	intergenic	not near genes	chr3L_4_14265001	chr3L_14265001	Sg4
1422	chr3L	14295962	14296011	chr3L	14296473	14296522	roo	13	510	5.5	10.0	7.8	1.5	560	chr3L	14295962	intron	fz +	chr3L	14296242	intron	fz +	chr3L	14296522	intron	fz +	chr3L_13_14295001	chr3L_14295001	Sg4
1423	chr3L	14312011	14312055	chr3L	14316836	14316848	X-element	14	4826	2.5	4.0	3.2	3.3	4837	chr3L	14312011	exon	fz +	chr3L	14314430	intron	fz +	chr3L	14316848	intron	fz +	chr3L_14_14310001	chr3L_14310001	Sg4
1429	chr3L	14468435	14468475	chr3L	14473666	14473706	copia	11	5230	4.5	5.5	5.0	1.8	5271	chr3L	14468435	intron	bbg -	chr3L	14471070	intron	bbg -	chr3L	14473706	intron	bbg -	chr3L_11_14470001	chr3L_14470001	Sg4
1435	chr3L	14721164	14721206	chr3L	14723032	14723074	Rt1c	22	1867	4.5	4.0	4.2	4.2	1910	chr3L	14721164	intron	ome +	chr3L	14722119	intron	ome +	chr3L	14723074	intron	ome +	chr3L_22_14720001	chr3L_14720001	Sg4
1437	chr3L	14825138	14825152	chr3L	14832890	14832904	Stalker2	4	7752	0.5	9.0	4.8	0.7	7766	chr3L	14825138	intron	CG17839 +	chr3L	14829021	intron	CG17839 +	chr3L	14832904	intron	CG17839 +	chr3L_4_14825001	chr3L_14825001	Sg4
1440	chr3L	15085025	15085081	chr3L	15086216	15086269	1360	12	1185	1.5	3.5	2.5	3.4	1244	chr3L	15085025	intron	cp309 -	chr3L	15085647	intron	cp309 -	chr3L	15086269	intron	cp309 -	chr3L_12_15085001	chr3L_15085001	Sg4
1451	chr3L	15423746	15423779	chr3L	15426615	15426648	opus	7	2869	1.5	2.5	2.0	2.3	2902	chr3L	15423746	intergenic	not near genes	chr3L	15425197	intergenic	not near genes	chr3L	15426648	intergenic	not near genes	chr3L_7_15425001	chr3L_15425001	Sg4
1465	chr3L	15899203	15899259	chr3L	15899795	15899844	jockey	12	587	3.0	5.0	4.0	2.4	641	chr3L	15899203	intergenic	pHCl -	chr3L	15899524	intergenic	pHCl -	chr3L	15899844	intergenic	sff -	chr3L_12_15895001	chr3L_15895001	Sg4
1466	chr3L	15929173	15929223	chr3L	15938345	15938395	roo	15	9172	1.5	2.5	2.0	5.0	9222	chr3L	15929173	intron	Pka-C3 -	chr3L	15933784	intron	Pka-C3 -	chr3L	15938395	intron	Pka-C3 -	chr3L_15_15930001	chr3L_15930001	Sg4
1472	chr3L	16184087	16184130	chr3L	16188931	16188974	X-element	8	4844	2.5	3.5	3.0	2.0	4887	chr3L	16184087	intergenic	not near genes	chr3L	16186530	intergenic	not near genes	chr3L	16188974	intergenic	not near genes	chr3L_8_16185001	chr3L_16185001	Sg4
1477	chr3L	16443825	16443878	chr3L	16446190	16446232	Doc	15	2364	4.0	5.0	4.5	2.7	2407	chr3L	16443825	intron,intron	CG33158 +,dsx-c73A -	chr3L	16445028	intron,intron	CG33158 +,dsx-c73A -	chr3L	16446232	intron,intron	CG33158 +,dsx-c73A -	chr3L_15_16445001	chr3L_16445001	Sg4
1481	chr3L	16493951	16494007	chr3L	16494493	16494548	jockey	15	541	6.0	4.0	5.0	2.5	597	chr3L	16493951	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L	16494250	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L	16494548	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L_15_16490001	chr3L_16490001	Sg4
1485	chr3L	16616486	16616540	chr3L	16621839	16621893	297	8	5353	5.0	2.5	3.8	1.7	5407	chr3L	16616486	3` UTR	Abl -	chr3L	16619190	3` UTR	Abl -	chr3L	16621893	3` UTR	Abl -	chr3L_8_16615001	chr3L_16615001	Sg4
1486	chr3L	16683997	16684035	chr3L	16689243	16689281	copia	4	5246	2.0	3.5	2.8	1.1	5284	chr3L	16683997	intron,intron	Lasp -,CG43954 -	chr3L	16686639	intron,intron	Lasp -,CG43954 -	chr3L	16689281	intron,intron,5` UTR	Lasp -,CG43954 -,CR45179 +	chr3L_4_16685001	chr3L_16685001	Sg4
1493	chr3L	16945712	16945747	chr3L	16954889	16954896	roo	19	9174	10.0	6.0	8.0	2.1	9184	chr3L	16945712	exon	Obp73a +	chr3L	16950304	intergenic	not near genes	chr3L	16954896	5` UTR	Nc73EF +	chr3L_19_16950001	chr3L_16950001	Sg4
1497	chr3L	17034908	17034967	chr3L	17035121	17035175	G2	8	212	1.5	1.5	1.5	3.2	267	chr3L	17034908	intergenic	not near genes	chr3L	17035042	intergenic	not near genes	chr3L	17035175	intergenic	beg +	chr3L_8_17035001	chr3L_17035001	Sg4
1498	chr3L	17084986	17085026	chr3L	17094160	17094200	roo	12	9174	4.0	4.0	4.0	2.4	9214	chr3L	17084986	intron	Rbp6 -	chr3L	17089593	intron	Rbp6 -	chr3L	17094200	intron	Rbp6 -	chr3L_12_17085001	chr3L_17085001	Sg4
1512	chr3L	17516960	17517003	chr3L	17524543	17524586	412	11	7583	1.5	5.5	3.5	2.4	7626	chr3L	17516960	intron	CG7564 +	chr3L	17520773	intron	CG7564 +	chr3L	17524586	3` UTR	CG7564 +	chr3L_11_17520001	chr3L_17520001	Sg4
1517	chr3L	17730830	17730862	chr3L	17738185	17738217	mdg1	5	7355	2.5	2.0	2.2	1.6	7387	chr3L	17730830	intron	Ccn +	chr3L	17734524	intron	Ccn +	chr3L	17738217	intron	Ccn +	chr3L_5_17730001	chr3L_17730001	Sg4
1522	chr3L	17799793	17799830	chr3L	17801605	17801642	S-element	5	1810	4.0	1.5	2.8	1.3	1849	chr3L	17799793	intron	NUCB1 -	chr3L	17800718	intron	NUCB1 -	chr3L	17801642	intron	NUCB1 -	chr3L_5_17800001	chr3L_17800001	Sg4
1527	chr3L	17918353	17918384	chr3L	17921174	17921212	opus	5	2827	6.5	3.5	5.0	0.8	2859	chr3L	17918353	intergenic	not near genes	chr3L	17919782	intergenic	not near genes	chr3L	17921212	intergenic	not near genes	chr3L_5_17915001	chr3L_17915001	Sg4
1534	chr3L	18047685	18047741	chr3L	18056767	18056782	roo	6	9075	2.0	0.5	1.2	2.7	9097	chr3L	18047685	intron	Eip75B -	chr3L	18052234	intron	Eip75B -	chr3L	18056782	intron	Eip75B -	chr3L_6_18050001	chr3L_18050001	Sg4
1552	chr3L	18506123	18506160	chr3L	18509611	18509648	F-element	6	3488	0.5	2.0	1.2	2.7	3525	chr3L	18506123	intergenic	not near genes	chr3L	18507886	intergenic	not near genes	chr3L	18509648	intergenic	not near genes	chr3L_6_18505001	chr3L_18505001	Sg4
1553	chr3L	18528605	18528641	chr3L	18537791	18537827	roo	6	9186	2.5	1.5	2.0	2.0	9222	chr3L	18528605	intergenic	not near genes	chr3L	18533216	intergenic	not near genes	chr3L	18537827	intergenic	not near genes	chr3L_6_18530001	chr3L_18530001	Sg4
1555	chr3L	18593933	18593961	chr3L	18595938	18595960	Doc	9	2004	5.0	1.5	3.2	2.1	2027	chr3L	18593933	intergenic	term -	chr3L	18594946	intergenic	not near genes	chr3L	18595960	intergenic	CR45389 +	chr3L_9_18590001	chr3L_18590001	Sg4
1557	chr3L	18710769	18710792	chr3L	18718744	18718767	Stalker2	6	7975	2.0	1.0	1.5	2.4	7998	chr3L	18710769	intergenic	not near genes	chr3L	18714768	intergenic	not near genes	chr3L	18718767	intergenic	not near genes	chr3L_6_18710001	chr3L_18710001	Sg4
1562	chr3L	18772386	18772432	chr3L	18781092	18781138	roo	8	8705	3.5	3.0	3.2	1.9	8752	chr3L	18772386	intron	ftz-f1 -	chr3L	18776762	intron	ftz-f1 -	chr3L	18781138	intron	ftz-f1 -	chr3L_8_18775001	chr3L_18775001	Sg4
1573	chr3L	19115620	19115663	chr3L	19115825	19115858	BS	10	203	4.0	2.5	3.2	2.4	238	chr3L	19115620	intron	CG14082 -	chr3L	19115739	intron	CG14082 -	chr3L	19115858	intron	CG14082 -	chr3L_10_19115001	chr3L_19115001	Sg4
1574	chr3L	19117020	19117072	chr3L	19124492	19124544	mdg1	11	7470	4.0	3.5	3.8	2.3	7524	chr3L	19117020	intron	CG14082 -	chr3L	19120782	intron	CG14082 -	chr3L	19124544	intron	CG14082 -	chr3L_11_19120001	chr3L_19120001	Sg4
1575	chr3L	19208036	19208088	chr3L	19209435	19209487	Doc	12	1399	4.0	1.5	2.8	3.2	1451	chr3L	19208036	intron	fz2 -	chr3L	19208762	intron	fz2 -	chr3L	19209487	intron	fz2 -	chr3L_12_19205001	chr3L_19205001	Sg4
1593	chr3L	19820275	19820316	chr3L	19827849	19827885	412	13	7574	4.5	2.0	3.2	3.1	7610	chr3L	19820275	intron	Deaf1 +	chr3L	19824080	intron	Deaf1 +	chr3L	19827885	intron	Deaf1 +	chr3L_13_19820001	chr3L_19820001	Sg4
1594	chr3L	19848483	19848524	chr3L	19857698	19857739	roo	5	9215	4.5	4.0	4.2	1.0	9256	chr3L	19848483	intron	Papss +	chr3L	19853111	intron	Papss +	chr3L	19857739	intron	Papss +	chr3L_5_19850001	chr3L_19850001	Sg4
1602	chr3L	20113638	20113683	chr3L	20122920	20122963	roo	17	9281	4.0	5.5	4.8	2.9	9325	chr3L	20113638	intergenic	not near genes	chr3L	20118300	intergenic	not near genes	chr3L	20122963	intergenic	not near genes	chr3L_17_20115001	chr3L_20115001	Sg4
1609	chr3L	20257318	20257338	chr3L	20258459	20258479	pogo	9	1141	10.5	13.0	11.8	0.7	1161	chr3L	20257318	intron	rdgC +	chr3L	20257898	intron	rdgC +	chr3L	20258479	intron	rdgC +	chr3L_9_20255001	chr3L_20255001	Sg4
1610	chr3L	20257343	20257363	chr3L	20258458	20258504	pogo	14	1139	6.0	13.0	9.5	1.3	1161	chr3L	20257343	intron	rdgC +	chr3L	20257924	intron	rdgC +	chr3L	20258504	intron	rdgC +	chr3L_14_20255001	chr3L_20255001	Sg4
1612	chr3L	20321090	20321129	chr3L	20342876	20342910	17.6	7	21782	16.5	25.5	21.0	0.3	21820	chr3L	20321090	exon	Spn77Bb +	chr3L	20332000	intergenic	not near genes	chr3L	20342910	exon	Spn77Bc +	chr3L_7_20330001	chr3L_20330001	Sg4
1615	chr3L	20476736	20476778	chr3L	20484360	20484402	springer	13	7624	6.5	4.5	5.5	2.0	7666	chr3L	20476736	3` UTR	isoQC +	chr3L	20480569	intergenic	not near genes	chr3L	20484402	3` UTR	ZnT77C -	chr3L_13_20480001	chr3L_20480001	Sg4
1616	chr3L	20487643	20487669	chr3L	20488119	20488145	INE-1	14	476	8.0	9.0	8.5	1.5	502	chr3L	20487643	intron	ZnT77C -	chr3L	20487894	intron	ZnT77C -	chr3L	20488145	exon	ZnT77C -	chr3L_14_20485001	chr3L_20485001	Sg4
1617	chr3L	20590042	20590094	chr3L	20590606	20590658	412	22	563	4.0	4.5	4.2	4.2	616	chr3L	20590042	intergenic	not near genes	chr3L	20590350	intergenic	not near genes	chr3L	20590658	intergenic	not near genes	chr3L_22_20590001	chr3L_20590001	Sg4
1620	chr3L	20821275	20821300	chr3L	20824769	20824794	NOF	8	3493	2.0	5.0	3.5	1.8	3519	chr3L	20821275	intron	Pka-R1 +	chr3L	20823034	intron	Pka-R1 +	chr3L	20824794	intron	Pka-R1 +	chr3L_8_20820001	chr3L_20820001	Sg4
1625	chr3L	21014889	21014947	chr3L	21023395	21023453	Tirant	17	8506	3.5	5.0	4.2	3.3	8564	chr3L	21014889	intron	skd -	chr3L	21019171	intron	skd -	chr3L	21023453	intron	skd -	chr3L_17_21015001	chr3L_21015001	Sg4
1627	chr3L	21151844	21151891	chr3L	21156953	21157000	flea	10	5109	3.0	3.5	3.2	2.4	5156	chr3L	21151844	intron	Ac78C -	chr3L	21154422	intron	Ac78C -	chr3L	21157000	intron	Ac78C -	chr3L_10_21150001	chr3L_21150001	Sg4
1628	chr3L	21243732	21243754	chr3L	21251310	21251331	412	5	7580	8.5	3.0	5.8	0.7	7599	chr3L	21243732	intron	Eip78C +	chr3L	21247532	intron	Eip78C +	chr3L	21251331	intron	Eip78C +	chr3L_5_21245001	chr3L_21245001	Sg4
1629	chr3L	21306127	21306178	chr3L	21315311	21315362	roo	19	9182	3.5	2.0	2.8	5.0	9235	chr3L	21306127	3` UTR	CG7632 +	chr3L	21310744	intron	Pc -	chr3L	21315362	3` UTR	Pc -	chr3L_19_21310001	chr3L_21310001	Sg4
1630	chr3L	21372724	21372746	chr3L	21379257	21379279	McClintock	4	6533	2.0	4.5	3.2	1.0	6555	chr3L	21372724	intergenic	not near genes	chr3L	21376002	intergenic	not near genes	chr3L	21379279	intergenic	not near genes	chr3L_4_21375001	chr3L_21375001	Sg4
1633	chr3L	21498829	21498869	chr3L	21500484	21500525	1360	6	1658	3.0	9.0	6.0	0.9	1696	chr3L	21498829	5` UTR,intron	CR43933 +,Glg1 -	chr3L	21499677	intron	Glg1 -	chr3L	21500525	intron	Glg1 -	chr3L_6_21495001	chr3L_21495001	Sg4
1634	chr3L	21501148	21501154	chr3L	21501267	21501273	1360	6	119	5.0	7.5	6.2	0.8	125	chr3L	21501148	intron	Glg1 -	chr3L	21501210	intron	Glg1 -	chr3L	21501273	intron	Glg1 -	chr3L_6_21500001	chr3L_21500001	Sg4
1639	chr3L	21749293	21749340	chr3L	21754478	21754482	Doc	7	5173	10.5	5.0	7.8	0.8	5189	chr3L	21749293	intron	Syn1 -	chr3L	21751888	intron	Syn1 -	chr3L	21754482	intron	Syn1 -	chr3L_7_21750001	chr3L_21750001	Sg4
1653	chr3L	22099681	22099703	chr3L	22105864	22105914	3S18	4	6204	4.0	4.5	4.2	0.8	6233	chr3L	22099681	intergenic	not near genes	chr3L	22102798	intergenic	not near genes	chr3L	22105914	intergenic	not near genes	chr3L_4_22100001	chr3L_22100001	Sg4
1669	chr3L	22555746	22555801	chr3L	22563241	22563296	blood	17	7492	2.0	5.5	3.8	3.5	7550	chr3L	22555746	intergenic	not near genes	chr3L	22559521	intergenic	not near genes	chr3L	22563296	intergenic	not near genes	chr3L_17_22555001	chr3L_22555001	Sg4
1671	chr3L	22577598	22577645	chr3L	22582411	22582458	Doc	13	4812	3.5	2.5	3.0	3.2	4860	chr3L	22577598	intergenic	not near genes	chr3L	22580028	intergenic	not near genes	chr3L	22582458	3` UTR	CG14459 -	chr3L_13_22580001	chr3L_22580001	Sg4
1672	chr3L	22617169	22617216	chr3L	22624645	22624693	blood	15	7477	4.5	5.5	5.0	2.5	7524	chr3L	22617169	intron	CG14459 -	chr3L	22620931	intron	CG14459 -	chr3L	22624693	intron	CG14459 -	chr3L_15_22620001	chr3L_22620001	Sg4
1675	chr3L	22761373	22761413	chr3L	22766832	22766872	Ivk	8	5458	3.5	6.0	4.8	1.4	5499	chr3L	22761373	intron	SPoCk +	chr3L	22764122	intron	SPoCk +	chr3L	22766872	intron	SPoCk +	chr3L_8_22760001	chr3L_22760001	Sg4
1683	chr3L	22989842	22989894	chr3L	22996840	22996893	297	18	6999	5.0	4.0	4.5	3.3	7051	chr3L	22989842	intergenic	not near genes	chr3L	22993368	intergenic	not near genes	chr3L	22996893	intergenic	not near genes	chr3L_18_22990001	chr3L_22990001	Sg4
1689	chr3L	24012390	24012430	chr3L	24020756	24020796	roo	8	8366	4.0	2.0	3.0	2.0	8406	chr3L	24012390	intergenic	not near genes	chr3L	24016593	intergenic	not near genes	chr3L	24020796	intergenic	not near genes	chr3L_8_24015001	chr3L_24015001	Sg4
1690	chr3L	24168773	24168820	chr3L	24176126	24176173	ZAM	16	7352	5.0	6.0	5.5	2.5	7400	chr3L	24168773	intron	Snap25 +	chr3L	24172473	intron	Snap25 +	chr3L	24176173	intron	Snap25 +	chr3L_16_24170001	chr3L_24170001	Sg4
1692	chr3L	24791888	24791911	chr3L	24796692	24796715	Doc	7	4804	5.5	3.5	4.5	1.3	4827	chr3L	24791888	intergenic	not near genes	chr3L	24794302	intergenic	not near genes	chr3L	24796715	intergenic	not near genes	chr3L_7_24790001	chr3L_24790001	Sg4
1696	chr3L	25628497	25628516	chr3L	25633282	25633312	F-element	7	4794	4.5	7.0	5.8	1.0	4815	chr3L	25628497	intron	CG41343 -	chr3L	25630904	intron	CG41343 -	chr3L	25633312	intron	CG41343 -	chr3L_7_25630001	chr3L_25630001	Sg4
1708	chr3R	3989303	3989307	chr3R	4068947	4068951	mdg1	4	79644	18.0	12.5	15.2	0.2	79648	chr3R	3989303	intergenic	not near genes	chr3R	4029127	intergenic	not near genes	chr3R	4068951	intergenic	not near genes	chr3R_4_4025001	chr3R_4025001	Sg4
1710	chr3R	4206047	4206101	chr3R	4211647	4211701	mdg3	9	5597	3.5	1.5	2.5	2.6	5654	chr3R	4206047	intron	CG14636 -	chr3R	4208874	intron	CG14636 -	chr3R	4211701	intron	CG14636 -	chr3R_9_4205001	chr3R_4205001	Sg4
1712	chr3R	4366737	4366778	chr3R	4375145	4375186	roo	7	8408	6.5	3.0	4.8	1.2	8449	chr3R	4366737	3` UTR	CG1090 +	chr3R	4370962	intergenic	not near genes	chr3R	4375186	5` UTR	CR44922 +	chr3R_7_4370001	chr3R_4370001	Sg4
1713	chr3R	4408390	4408435	chr3R	4412719	4412764	Juan	14	4329	6.5	5.0	5.8	2.1	4374	chr3R	4408390	intron	CG32944 -	chr3R	4410577	intron	CG32944 -	chr3R	4412764	intron	CG32944 -	chr3R_14_4410001	chr3R_4410001	Sg4
1721	chr3R	4753225	4753260	chr3R	4757553	4757587	F-element	18	4327	7.0	10.5	8.8	1.8	4362	chr3R	4753225	intron,intron	atms +,CG44098 -	chr3R	4755406	intron,intron	atms +,CG44098 -	chr3R	4757587	intron,exon	atms +,CG44098 -	chr3R_18_4755001	chr3R_4755001	Sg4
1724	chr3R	4887456	4887508	chr3R	4894858	4894910	rover	19	7401	1.5	5.5	3.5	4.2	7454	chr3R	4887456	intergenic	not near genes	chr3R	4891183	intergenic	not near genes	chr3R	4894910	intergenic	not near genes	chr3R_19_4890001	chr3R_4890001	Sg4
1733	chr3R	5045822	5045867	chr3R	5052949	5052994	HMS-Beagle	16	7127	4.5	3.0	3.8	3.3	7172	chr3R	5045822	3` UTR	CR43635 -	chr3R	5049408	intergenic	not near genes	chr3R	5052994	intergenic	CR45588 -	chr3R_16_5045001	chr3R_5045001	Sg4
1734	chr3R	5067959	5068013	chr3R	5073501	5073555	mdg3	15	5542	2.5	6.5	4.5	2.7	5596	chr3R	5067959	intergenic	not near genes	chr3R	5070757	intergenic	not near genes	chr3R	5073555	intergenic	not near genes	chr3R_15_5070001	chr3R_5070001	Sg4
1742	chr3R	5445935	5445985	chr3R	5452420	5452470	Burdock	10	6485	4.5	4.5	4.5	1.8	6535	chr3R	5445935	intron	CG14669 +	chr3R	5449202	intron	CG14669 +	chr3R	5452470	intron	CG14669 +	chr3R_10_5445001	chr3R_5445001	Sg4
1750	chr3R	5746001	5746037	chr3R	5746267	5746303	pogo	13	266	3.5	4.0	3.8	2.7	302	chr3R	5746001	3` UTR	Madm +	chr3R	5746152	3` UTR	Madm +	chr3R	5746303	3` UTR	Madm +	chr3R_13_5745001	chr3R_5745001	Sg4
1751	chr3R	5746997	5747045	chr3R	5753213	5753256	diver	4	6215	3.5	4.0	3.8	0.8	6259	chr3R	5746997	intergenic	Madm +	chr3R	5750126	intergenic	not near genes	chr3R	5753256	intergenic	CG2091 -	chr3R_4_5750001	chr3R_5750001	Sg4
1753	chr3R	5809098	5809136	chr3R	5809353	5809402	pogo	16	264	4.5	3.5	4.0	3.2	304	chr3R	5809098	3` UTR	CG11000 +	chr3R	5809250	3` UTR	CG11000 +	chr3R	5809402	3` UTR	CG11000 +	chr3R_16_5805001	chr3R_5805001	Sg4
1756	chr3R	5927562	5927578	chr3R	5927800	5927822	pogo	6	257	5.5	5.5	5.5	0.9	260	chr3R	5927562	intron	CG34113 -	chr3R	5927692	intron	CG34113 -	chr3R	5927822	intron	CG34113 -	chr3R_6_5925001	chr3R_5925001	Sg4
1761	chr3R	6015956	6015991	chr3R	6024442	6024497	Tirant	10	8503	4.5	6.5	5.5	1.5	8541	chr3R	6015956	intergenic	not near genes	chr3R	6020226	intergenic	not near genes	chr3R	6024497	intergenic	not near genes	chr3R_10_6020001	chr3R_6020001	Sg4
1762	chr3R	6158493	6158536	chr3R	6167101	6167144	Tirant	8	8608	3.5	6.0	4.8	1.4	8651	chr3R	6158493	intergenic	not near genes	chr3R	6162818	intergenic	not near genes	chr3R	6167144	intergenic	CG1077 +	chr3R_8_6160001	chr3R_6160001	Sg4
1763	chr3R	6175147	6175206	chr3R	6182444	6182498	HMS-Beagle2	8	7292	2.0	2.5	2.2	2.5	7351	chr3R	6175147	intergenic	Osi1 +	chr3R	6178822	intron	CR45194 +	chr3R	6182498	intergenic	CR45194 +	chr3R_8_6175001	chr3R_6175001	Sg4
1765	chr3R	6206270	6206296	chr3R	6206507	6206538	BS	9	241	9.0	5.5	7.2	1.1	268	chr3R	6206270	exon	Osi24 +	chr3R	6206404	intron	Osi24 +	chr3R	6206538	intron	Osi24 +	chr3R_9_6205001	chr3R_6205001	Sg4
1775	chr3R	6737482	6737523	chr3R	6739294	6739335	Doc	7	1809	5.0	6.5	5.8	1.0	1853	chr3R	6737482	intron	pb -	chr3R	6738408	intron	pb -	chr3R	6739335	intron	pb -	chr3R_7_6735001	chr3R_6735001	Sg4
1800	chr3R	7694557	7694609	chr3R	7713643	7713695	invader3	12	19086	4.5	2.5	3.5	2.7	19138	chr3R	7694557	3` UTR	Nlg1 +	chr3R	7704126	intergenic	not near genes	chr3R	7713695	intergenic	not near genes	chr3R_12_7700001	chr3R_7700001	Sg4
1801	chr3R	7729443	7729493	chr3R	7737406	7737456	Stalker2	19	7960	2.5	4.5	3.5	4.2	8013	chr3R	7729443	intergenic	not near genes	chr3R	7733450	intergenic	not near genes	chr3R	7737456	intergenic	not near genes	chr3R_19_7730001	chr3R_7730001	Sg4
1806	chr3R	8090541	8090560	chr3R	8094043	8094061	297	5	3502	3.5	13.5	8.5	0.5	3520	chr3R	8090541	intergenic	CR44330 +	chr3R	8092301	intergenic	not near genes	chr3R	8094061	intergenic	CG7900 +	chr3R_5_8090001	chr3R_8090001	Sg4
1807	chr3R	8094393	8094436	chr3R	8099723	8099766	Transpac	16	5330	4.0	3.5	3.8	3.3	5373	chr3R	8094393	intron	CG7900 +	chr3R	8097080	intron	CG7900 +	chr3R	8099766	intron	CG7900 +	chr3R_16_8095001	chr3R_8095001	Sg4
1808	chr3R	8101738	8101772	chr3R	8104847	8104881	G2	6	3108	6.5	7.5	7.0	0.8	3143	chr3R	8101738	exon	CG7900 +	chr3R	8103310	intron	CG7900 +	chr3R	8104881	3` UTR	CG7900 +	chr3R_6_8100001	chr3R_8100001	Sg4
1811	chr3R	8207552	8207587	chr3R	8208404	8208413	F-element	13	864	5.5	0.5	3.0	3.2	861	chr3R	8207552	intergenic	not near genes	chr3R	8207982	intergenic	not near genes	chr3R	8208413	intergenic	not near genes	chr3R_13_8205001	chr3R_8205001	Sg4
1815	chr3R	8402993	8403039	chr3R	8412174	8412230	roo	15	9183	6.5	7.0	6.8	1.9	9237	chr3R	8402993	intron	CG45263 -	chr3R	8407612	intron	CG45263 -	chr3R	8412230	intron	CG45263 -	chr3R_15_8405001	chr3R_8405001	Sg4
1818	chr3R	8570456	8570507	chr3R	8575116	8575168	HMS-Beagle	17	4659	5.5	3.5	4.5	3.1	4712	chr3R	8570456	intergenic	not near genes	chr3R	8572812	intergenic	not near genes	chr3R	8575168	intergenic	not near genes	chr3R_17_8570001	chr3R_8570001	Sg4
1819	chr3R	8601751	8601800	chr3R	8610929	8610952	roo	9	9174	3.5	3.5	3.5	2.0	9201	chr3R	8601751	intron	5-HT2B +	chr3R	8606352	intron	5-HT2B +	chr3R	8610952	intron	5-HT2B +	chr3R_9_8605001	chr3R_8605001	Sg4
1824	chr3R	8707333	8707382	chr3R	8709799	8709847	jockey	16	2465	4.5	1.5	3.0	4.0	2514	chr3R	8707333	intergenic	not near genes	chr3R	8708590	intergenic	not near genes	chr3R	8709847	intergenic	not near genes	chr3R_16_8705001	chr3R_8705001	Sg4
1827	chr3R	8894854	8894902	chr3R	8896035	8896082	1360	5	1181	2.5	5.0	3.8	1.0	1228	chr3R	8894854	intron	pyd -	chr3R	8895468	intron	pyd -	chr3R	8896082	intron	pyd -	chr3R_5_8895001	chr3R_8895001	Sg4
1828	chr3R	8898197	8898213	chr3R	8913802	8913818	297	6	15604	8.5	5.5	7.0	0.8	15621	chr3R	8898197	intron	pyd -	chr3R	8906008	intron	pyd -	chr3R	8913818	intron	pyd -	chr3R_6_8905001	chr3R_8905001	Sg4
1838	chr3R	9278763	9278796	chr3R	9284048	9284081	Rt1a	14	5285	7.5	7.0	7.2	1.7	5318	chr3R	9278763	intergenic	not near genes	chr3R	9281422	intergenic	not near genes	chr3R	9284081	intergenic	not near genes	chr3R_14_9280001	chr3R_9280001	Sg4
1839	chr3R	9319557	9319600	chr3R	9320016	9320060	jockey	14	460	4.0	4.5	4.2	2.7	503	chr3R	9319557	intron	CG8861 -	chr3R	9319808	intron	CG8861 -	chr3R	9320060	intron	CG8861 -	chr3R_14_9315001	chr3R_9315001	Sg4
1840	chr3R	9361804	9361839	chr3R	9362070	9362105	pogo	8	266	4.5	5.0	4.8	1.4	301	chr3R	9361804	3` UTR	CG45050 +	chr3R	9361954	3` UTR	CG45050 +	chr3R	9362105	3` UTR	CG45050 +	chr3R_8_9360001	chr3R_9360001	Sg4
1853	chr3R	10231759	10231811	chr3R	10237361	10237413	mdg3	12	5600	1.5	3.5	2.5	3.4	5654	chr3R	10231759	intron	CG42795 +	chr3R	10234586	intron	CG42795 +	chr3R	10237413	intron	CG42795 +	chr3R_12_10230001	chr3R_10230001	Sg4
1864	chr3R	10804149	10804198	chr3R	10811705	10811755	17.6	11	7557	2.5	4.5	3.5	2.4	7606	chr3R	10804149	intergenic	CG14692 -	chr3R	10807952	intergenic	not near genes	chr3R	10811755	3` UTR	CG14693 -	chr3R_11_10805001	chr3R_10805001	Sg4
1879	chr3R	11379216	11379257	chr3R	11388395	11388427	roo	4	9177	3.5	6.5	5.0	0.7	9211	chr3R	11379216	intron	pros +	chr3R	11383822	intron	pros +	chr3R	11388427	intron	pros +	chr3R_4_11380001	chr3R_11380001	Sg4
1890	chr3R	11841040	11841087	chr3R	11846256	11846303	BS	13	5216	7.5	6.5	7.0	1.6	5263	chr3R	11841040	intron	CG6959 -	chr3R	11843672	intron	CG6959 -	chr3R	11846303	intron	CG6959 -	chr3R_13_11840001	chr3R_11840001	Sg4
1896	chr3R	11957845	11957860	chr3R	11958153	11958168	S-element	6	308	2.0	0.0	1.0	3.0	323	chr3R	11957845	intergenic	not near genes	chr3R	11958006	intergenic	not near genes	chr3R	11958168	intergenic	not near genes	chr3R_6_11955001	chr3R_11955001	Sg4
1899	chr3R	12022877	12022912	chr3R	12025073	12025114	pogo	7	2201	0.5	6.0	3.2	1.7	2237	chr3R	12022877	intergenic	not near genes	chr3R	12023996	intergenic	not near genes	chr3R	12025114	intergenic	not near genes	chr3R_7_12020001	chr3R_12020001	Sg4
1920	chr3R	12864572	12864588	chr3R	12865082	12865098	roo	4	509	0.0	2.0	1.0	2.0	526	chr3R	12864572	intergenic	not near genes	chr3R	12864835	intergenic	not near genes	chr3R	12865098	intergenic	not near genes	chr3R_4_12860001	chr3R_12860001	Sg4
1922	chr3R	12920137	12920181	chr3R	12925365	12925403	copia	12	5226	3.0	3.5	3.2	2.9	5266	chr3R	12920137	intron	beat-Vb +	chr3R	12922770	intron	beat-Vb +	chr3R	12925403	intron	beat-Vb +	chr3R_12_12920001	chr3R_12920001	Sg4
1927	chr3R	13135807	13135850	chr3R	13138007	13138050	pogo	10	2199	3.5	2.5	3.0	2.5	2243	chr3R	13135807	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13136928	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13138050	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R_10_13135001	chr3R_13135001	Sg4
1928	chr3R	13143020	13143066	chr3R	13148611	13148657	mdg3	9	5597	3.5	4.5	4.0	1.8	5637	chr3R	13143020	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13145838	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13148657	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R_9_13145001	chr3R_13145001	Sg4
1930	chr3R	13314070	13314121	chr3R	13318884	13318934	Doc	4	4813	1.0	3.5	2.2	1.2	4864	chr3R	13314070	intergenic	not near genes	chr3R	13316502	intergenic	not near genes	chr3R	13318934	intergenic	CG45080 -	chr3R_4_13315001	chr3R_13315001	Sg4
1935	chr3R	13517200	13517253	chr3R	13520042	13520085	jockey	4	2839	2.5	0.0	1.2	1.8	2885	chr3R	13517200	intergenic	not near genes	chr3R	13518642	intergenic	not near genes	chr3R	13520085	intergenic	not near genes	chr3R_4_13515001	chr3R_13515001	Sg4
1946	chr3R	14194422	14194455	chr3R	14203576	14203629	roo	4	9169	4.0	2.0	3.0	1.0	9207	chr3R	14194422	intron	Dop1R1 -	chr3R	14199026	intron	Dop1R1 -	chr3R	14203629	intron	Dop1R1 -	chr3R_4_14195001	chr3R_14195001	Sg4
1949	chr3R	15162533	15162573	chr3R	15167324	15167365	F-element	11	4791	5.0	1.5	3.2	2.6	4832	chr3R	15162533	intron	Gyc88E +	chr3R	15164949	intron	Gyc88E +	chr3R	15167365	intron	Gyc88E +	chr3R_11_15160001	chr3R_15160001	Sg4
1952	chr3R	15601163	15601192	chr3R	15608710	15608739	412	4	7547	3.0	6.5	4.8	0.7	7576	chr3R	15601163	intergenic	not near genes	chr3R	15604951	intergenic	not near genes	chr3R	15608739	intergenic	not near genes	chr3R_4_15600001	chr3R_15600001	Sg4
1971	chr3R	16756296	16756337	chr3R	16762512	16762553	diver	14	6216	2.5	2.0	2.2	4.4	6257	chr3R	16756296	intron	bxd -	chr3R	16759424	intron	bxd -	chr3R	16762553	intron	bxd -	chr3R_14_16755001	chr3R_16755001	Sg4
1980	chr3R	17294646	17294695	chr3R	17295099	17295148	BS	9	450	3.0	2.0	2.5	2.6	502	chr3R	17294646	intergenic	not near genes	chr3R	17294897	intergenic	not near genes	chr3R	17295148	intergenic	not near genes	chr3R_9_17290001	chr3R_17290001	Sg4
1982	chr3R	17346707	17346711	chr3R	17348295	17348299	F-element	4	1588	4.0	5.0	4.5	0.7	1592	chr3R	17346707	intron	beat-IIa -	chr3R	17347503	intron	beat-IIa -	chr3R	17348299	intron	beat-IIa -	chr3R_4_17345001	chr3R_17345001	Sg4
1988	chr3R	17591262	17591301	chr3R	17591723	17591762	F-element	12	458	2.0	2.5	2.2	3.8	500	chr3R	17591262	intergenic	not near genes	chr3R	17591512	intergenic	not near genes	chr3R	17591762	intergenic	not near genes	chr3R_12_17590001	chr3R_17590001	Sg4
1989	chr3R	17638310	17638335	chr3R	17638821	17638846	roo	4	511	1.5	1.0	1.2	1.8	536	chr3R	17638310	intron	CG43175 +	chr3R	17638578	intron	CG43175 +	chr3R	17638846	intron,intron	CG43175 +,CR45222 +	chr3R_4_17635001	chr3R_17635001	Sg4
1993	chr3R	17925835	17925867	chr3R	17927327	17927359	hobo	6	1491	7.0	1.0	4.0	1.2	1524	chr3R	17925835	intron	cpo +	chr3R	17926597	intron	cpo +	chr3R	17927359	intron	cpo +	chr3R_6_17925001	chr3R_17925001	Sg4
1995	chr3R	18061571	18061609	chr3R	18063164	18063202	F-element	5	1591	2.5	2.0	2.2	1.6	1631	chr3R	18061571	intergenic	not near genes	chr3R	18062386	intergenic	not near genes	chr3R	18063202	intergenic	not near genes	chr3R_5_18060001	chr3R_18060001	Sg4
2004	chr3R	18606490	18606524	chr3R	18610747	18610781	F-element	4	4257	2.5	4.5	3.5	0.9	4291	chr3R	18606490	intron,intron	qin +,CG14304 -	chr3R	18608636	intron,intron	qin +,CG14304 -	chr3R	18610781	intron,intron	qin +,CG14304 -	chr3R_4_18605001	chr3R_18605001	Sg4
2038	chr3R	20109515	20109554	chr3R	20114746	20114785	copia	6	5231	2.0	3.5	2.8	1.6	5270	chr3R	20109515	intergenic	not near genes	chr3R	20112150	intergenic	not near genes	chr3R	20114785	intergenic	CG10887 +	chr3R_6_20110001	chr3R_20110001	Sg4
2040	chr3R	20156677	20156719	chr3R	20165865	20165914	roo	14	9194	2.5	2.0	2.2	4.4	9237	chr3R	20156677	intergenic	not near genes	chr3R	20161296	intergenic	not near genes	chr3R	20165914	intergenic	not near genes	chr3R_14_20160001	chr3R_20160001	Sg4
2042	chr3R	20245266	20245303	chr3R	20248901	20248938	F-element	5	3635	0.0	0.5	0.2	4.2	3672	chr3R	20245266	3` UTR	Nlg4 +	chr3R	20247102	intergenic	not near genes	chr3R	20248938	intergenic	not near genes	chr3R_5_20245001	chr3R_20245001	Sg4
2045	chr3R	20266500	20266537	chr3R	20272996	20273033	Burdock	10	6494	2.5	1.5	2.0	3.3	6533	chr3R	20266500	intron	cic +	chr3R	20269766	intron	cic +	chr3R	20273033	intron	cic +	chr3R_10_20265001	chr3R_20265001	Sg4
2049	chr3R	20330983	20331014	chr3R	20331494	20331525	roo	8	511	7.0	3.5	5.2	1.3	542	chr3R	20330983	intergenic	Sirt2 +	chr3R	20331254	intergenic	Sirt2 +	chr3R	20331525	intergenic	not near genes	chr3R_8_20330001	chr3R_20330001	Sg4
2055	chr3R	20506567	20506610	chr3R	20507395	20507438	BS	13	828	0.0	3.5	1.8	4.6	871	chr3R	20506567	intergenic	Or92a +	chr3R	20507002	intergenic	CG4288 -	chr3R	20507438	3` UTR	CG4288 -	chr3R_13_20505001	chr3R_20505001	Sg4
2056	chr3R	20512993	20513034	chr3R	20515721	20515762	opus	5	2728	2.5	4.5	3.5	1.1	2769	chr3R	20512993	intergenic	not near genes	chr3R	20514378	intergenic	not near genes	chr3R	20515762	intergenic	not near genes	chr3R_5_20510001	chr3R_20510001	Sg4
2062	chr3R	20854465	20854516	chr3R	20859280	20859308	Doc	5	4808	4.0	3.5	3.8	1.0	4843	chr3R	20854465	intron	Ir93a -	chr3R	20856886	intron	Ir93a -	chr3R	20859308	exon	Ir93a -	chr3R_5_20855001	chr3R_20855001	Sg4
2074	chr3R	21141650	21141705	chr3R	21150156	21150210	Tirant	14	8502	7.5	9.0	8.2	1.5	8560	chr3R	21141650	intron	SNF4Agamma +	chr3R	21145930	intron	SNF4Agamma +	chr3R	21150210	intron	SNF4Agamma +	chr3R_14_21145001	chr3R_21145001	Sg4
2103	chr3R	22234659	22234703	chr3R	22236003	22236047	pogo	8	1340	4.5	5.0	4.8	1.4	1388	chr3R	22234659	intron	SKIP +	chr3R	22235353	intron	SKIP +	chr3R	22236047	intron	SKIP +	chr3R_8_22235001	chr3R_22235001	Sg4
2104	chr3R	22239473	22239524	chr3R	22248558	22248597	roo	5	9075	3.5	3.0	3.2	1.2	9124	chr3R	22239473	intron	SKIP +	chr3R	22244035	intron	SKIP +	chr3R	22248597	intron	SKIP +	chr3R_5_22240001	chr3R_22240001	Sg4
2107	chr3R	22450527	22450573	chr3R	22453192	22453238	NOF	10	2664	2.5	7.5	5.0	1.7	2711	chr3R	22450527	intron	CG34376 +	chr3R	22451882	intron	CG34376 +	chr3R	22453238	intron	CG34376 +	chr3R_10_22450001	chr3R_22450001	Sg4
2118	chr3R	22881189	22881218	chr3R	22884920	22884948	Doc	4	3730	1.5	1.0	1.2	1.8	3759	chr3R	22881189	intergenic	not near genes	chr3R	22883068	intergenic	not near genes	chr3R	22884948	intergenic	not near genes	chr3R_4_22880001	chr3R_22880001	Sg4
2126	chr3R	23558377	23558429	chr3R	23560183	23560235	Bari1	11	1806	2.0	4.5	3.2	2.6	1858	chr3R	23558377	intron	beat-IV +	chr3R	23559306	intron	beat-IV +	chr3R	23560235	intron	beat-IV +	chr3R_11_23555001	chr3R_23555001	Sg4
2131	chr3R	23684672	23684723	chr3R	23685182	23685234	roo	19	509	7.5	7.5	7.5	2.2	562	chr3R	23684672	exon	CG18754 +	chr3R	23684953	intron	CG18754 +	chr3R	23685234	exon	CG18754 +	chr3R_19_23680001	chr3R_23680001	Sg4
2136	chr3R	23851062	23851083	chr3R	23858754	23858775	opus	5	7691	3.5	6.5	5.0	0.8	7713	chr3R	23851062	3` UTR	CG34355 +	chr3R	23854918	intergenic	not near genes	chr3R	23858775	intergenic	not near genes	chr3R_5_23850001	chr3R_23850001	Sg4
2142	chr3R	24072063	24072074	chr3R	24072526	24072537	jockey	5	463	15.0	0.0	7.5	0.6	474	chr3R	24072063	intron	4EHP -	chr3R	24072300	intron	4EHP -	chr3R	24072537	intron	4EHP -	chr3R_5_24070001	chr3R_24070001	Sg4
2143	chr3R	24072076	24072082	chr3R	24072524	24072525	jockey	4	449	14.0	0.0	7.0	0.5	449	chr3R	24072076	intron	4EHP -	chr3R	24072300	intron	4EHP -	chr3R	24072525	intron	4EHP -	chr3R_4_24070001	chr3R_24070001	Sg4
2144	chr3R	24072084	24072123	chr3R	24072522	24072584	jockey	10	448	6.5	0.0	3.2	2.4	500	chr3R	24072084	intron	4EHP -	chr3R	24072334	intron	4EHP -	chr3R	24072584	intron	4EHP -	chr3R_10_24070001	chr3R_24070001	Sg4
2145	chr3R	24076895	24076946	chr3R	24078387	24078438	hobo	10	1487	4.0	7.0	5.5	1.5	1543	chr3R	24076895	intron	4EHP -	chr3R	24077666	intron	4EHP -	chr3R	24078438	intron	4EHP -	chr3R_10_24075001	chr3R_24075001	Sg4
2152	chr3R	24207197	24207227	chr3R	24212298	24212328	flea	7	5100	7.5	6.5	7.0	0.9	5131	chr3R	24207197	intron	twin -	chr3R	24209762	intron	twin -	chr3R	24212328	intron	twin -	chr3R_7_24205001	chr3R_24205001	Sg4
2162	chr3R	24927107	24927158	chr3R	24931923	24931964	Doc	5	4813	3.5	6.0	4.8	0.9	4857	chr3R	24927107	intergenic	Trf4-2 +	chr3R	24929536	intergenic	not near genes	chr3R	24931964	intergenic	CG11771 +	chr3R_5_24925001	chr3R_24925001	Sg4
2182	chr3R	25725814	25725857	chr3R	25734999	25735042	roo	12	9185	5.5	3.5	4.5	2.2	9228	chr3R	25725814	intron	LpR2 -	chr3R	25730428	intron	LpR2 -	chr3R	25735042	intron	LpR2 -	chr3R_12_25730001	chr3R_25730001	Sg4
2183	chr3R	25832683	25832719	chr3R	25841890	25841926	roo	12	9207	5.5	6.5	6.0	1.7	9243	chr3R	25832683	exon	alpha4GT2 +	chr3R	25837304	intron	alpha4GT2 +	chr3R	25841926	exon	alpha4GT2 +	chr3R_12_25835001	chr3R_25835001	Sg4
2201	chr3R	26376304	26376338	chr3R	26385488	26385522	roo	9	9184	4.0	0.5	2.2	2.8	9218	chr3R	26376304	intergenic	not near genes	chr3R	26380913	intergenic	not near genes	chr3R	26385522	intergenic	not near genes	chr3R_9_26380001	chr3R_26380001	Sg4
2204	chr3R	26510497	26510533	chr3R	26519577	26519613	roo	9	9079	1.5	4.5	3.0	2.2	9116	chr3R	26510497	intron	plum -	chr3R	26515055	intron	plum -	chr3R	26519613	intron,5` UTR	plum -,CR45226 +	chr3R_9_26515001	chr3R_26515001	Sg4
2208	chr3R	26558304	26558355	chr3R	26565642	26565676	Stalker4	14	7332	3.0	3.5	3.2	3.3	7372	chr3R	26558304	intron	scrib +	chr3R	26561990	intron	scrib +	chr3R	26565676	intron	scrib +	chr3R_14_26560001	chr3R_26560001	Sg4
2212	chr3R	26642718	26642755	chr3R	26643135	26643172	jockey	6	418	6.5	3.5	5.0	1.0	454	chr3R	26642718	intergenic	not near genes	chr3R	26642945	intergenic	not near genes	chr3R	26643172	intergenic	not near genes	chr3R_6_26640001	chr3R_26640001	Sg4
2222	chr3R	26810534	26810559	chr3R	26811038	26811062	roo	6	504	2.5	3.5	3.0	1.5	528	chr3R	26810534	intron	Tl +	chr3R	26810798	intron	Tl +	chr3R	26811062	intron	Tl +	chr3R_6_26810001	chr3R_26810001	Sg4
2226	chr3R	27007381	27007437	chr3R	27016541	27016597	roo	9	9149	1.5	2.5	2.0	3.0	9216	chr3R	27007381	intron	RYa-R +	chr3R	27011989	intron	RYa-R +	chr3R	27016597	intron	RYa-R +	chr3R_9_27010001	chr3R_27010001	Sg4
2233	chr3R	27140499	27140542	chr3R	27148134	27148177	412	12	7635	5.0	4.0	4.5	2.2	7678	chr3R	27140499	intron	CG6051 -	chr3R	27144338	intron	CG6051 -	chr3R	27148177	intron	CG6051 -	chr3R_12_27140001	chr3R_27140001	Sg4
2235	chr3R	27342767	27342824	chr3R	27351373	27351430	Tirant	18	8606	5.5	3.5	4.5	3.3	8663	chr3R	27342767	intron	CG42534 +	chr3R	27347098	intron	CG42534 +	chr3R	27351430	intron	CG42534 +	chr3R_18_27345001	chr3R_27345001	Sg4
2241	chr3R	27521143	27521183	chr3R	27530377	27530417	roo	8	9233	2.5	1.5	2.0	2.7	9274	chr3R	27521143	intron	CG12885 +	chr3R	27525780	intron	CG12885 +	chr3R	27530417	intron	CG12885 +	chr3R_8_27525001	chr3R_27525001	Sg4
2249	chr3R	27856752	27856776	chr3R	27858249	27858284	hopper2	8	1502	5.0	1.5	3.2	1.9	1532	chr3R	27856752	intron	CG34353 -	chr3R	27857518	intron	CG34353 -	chr3R	27858284	intron	CG34353 -	chr3R_8_27855001	chr3R_27855001	Sg4
2250	chr3R	27862941	27862979	chr3R	27868271	27868308	Transpac	8	5329	2.0	1.5	1.8	2.9	5367	chr3R	27862941	intron	CG34353 -	chr3R	27865624	intron	CG34353 -	chr3R	27868308	intron	CG34353 -	chr3R_8_27865001	chr3R_27865001	Sg4
2251	chr3R	27875676	27875723	chr3R	27882756	27882803	297	13	7079	4.0	5.5	4.8	2.2	7127	chr3R	27875676	intron	CG34353 -	chr3R	27879240	intron	CG34353 -	chr3R	27882803	intron	CG34353 -	chr3R_13_27875001	chr3R_27875001	Sg4
2254	chr3R	28068483	28068524	chr3R	28073950	28073991	I-element	10	5467	0.0	4.5	2.2	3.1	5508	chr3R	28068483	intron	CG34362 +	chr3R	28071237	intron	CG34362 +	chr3R	28073991	intron	CG34362 +	chr3R_10_28070001	chr3R_28070001	Sg4
2257	chr3R	28253330	28253369	chr3R	28255860	28255904	jockey	16	2534	2.0	4.0	3.0	4.0	2574	chr3R	28253330	intergenic	not near genes	chr3R	28254617	intergenic	not near genes	chr3R	28255904	intergenic	not near genes	chr3R_16_28250001	chr3R_28250001	Sg4
2259	chr3R	28302082	28302125	chr3R	28302546	28302589	jockey	18	464	4.5	5.5	5.0	3.0	507	chr3R	28302082	intergenic	not near genes	chr3R	28302336	intergenic	not near genes	chr3R	28302589	intergenic	not near genes	chr3R_18_28300001	chr3R_28300001	Sg4
2267	chr3R	28758300	28758312	chr3R	28771332	28771344	Stalker4	4	13032	3.5	2.0	2.8	1.1	13044	chr3R	28758300	intergenic	aqrs -	chr3R	28764822	intergenic	not near genes	chr3R	28771344	intergenic	not near genes	chr3R_4_28760001	chr3R_28760001	Sg4
2268	chr3R	28792870	28792902	chr3R	28797970	28798012	jockey	11	5114	1.5	4.5	3.0	2.8	5142	chr3R	28792870	intergenic	not near genes	chr3R	28795441	intergenic	not near genes	chr3R	28798012	intergenic	not near genes	chr3R_11_28795001	chr3R_28795001	Sg4
2273	chr3R	29079384	29079407	chr3R	29080776	29080804	NOF	10	1396	3.5	8.5	6.0	1.4	1420	chr3R	29079384	intron	CG11873 +	chr3R	29080094	intron	CG11873 +	chr3R	29080804	intron	CG11873 +	chr3R_10_29080001	chr3R_29080001	Sg4
2285	chr3R	29319812	29319850	chr3R	29320156	29320179	jockey	9	342	8.0	10.5	9.2	0.9	367	chr3R	29319812	intergenic	Cnx99A -	chr3R	29319996	intergenic	Cnx99A -	chr3R	29320179	intergenic	not near genes	chr3R_9_29315001	chr3R_29315001	Sg4
2287	chr3R	29406596	29406646	chr3R	29407907	29407957	jockey	10	1310	4.0	6.5	5.2	1.6	1361	chr3R	29406596	intron	Ptp99A +	chr3R	29407276	intron	Ptp99A +	chr3R	29407957	intron	Ptp99A +	chr3R_10_29405001	chr3R_29405001	Sg4
2299	chr3R	29738244	29738295	chr3R	29739736	29739787	hobo	10	1492	1.0	3.0	2.0	3.3	1543	chr3R	29738244	intergenic	CG1969 +,CG7598 +	chr3R	29739016	intron	CG1969 +	chr3R	29739787	5` UTR	CG1969 +	chr3R_10_29735001	chr3R_29735001	Sg4
2302	chr3R	29760335	29760387	chr3R	29761561	29761613	pogo	18	1226	4.5	2.5	3.5	4.0	1278	chr3R	29760335	intergenic	not near genes	chr3R	29760974	intergenic	not near genes	chr3R	29761613	intergenic	not near genes	chr3R_18_29760001	chr3R_29760001	Sg4
2306	chr3R	29881996	29882050	chr3R	29891178	29891232	roo	15	9182	4.5	4.0	4.2	2.9	9236	chr3R	29881996	intron	CG31038 +	chr3R	29886614	intron	CG31038 +	chr3R	29891232	intron	CG31038 +	chr3R_15_29885001	chr3R_29885001	Sg4
2313	chr3R	30084828	30084873	chr3R	30086320	30086365	hobo	12	1492	8.5	2.0	5.2	1.9	1537	chr3R	30084828	intron	sima +	chr3R	30085596	intron	sima +	chr3R	30086365	intron	sima +	chr3R_12_30085001	chr3R_30085001	Sg4
2321	chr3R	30238736	30238794	chr3R	30239925	30239983	1360	8	1188	1.5	1.0	1.2	3.6	1247	chr3R	30238736	intergenic	not near genes	chr3R	30239360	intergenic	not near genes	chr3R	30239983	intergenic	not near genes	chr3R_8_30235001	chr3R_30235001	Sg4
2324	chr3R	30317329	30317342	chr3R	30324946	30324953	roo	4	7616	0.0	1.0	0.5	2.7	7624	chr3R	30317329	intron	hdc +	chr3R	30321141	intron	hdc +	chr3R	30324953	intron	hdc +	chr3R_4_30320001	chr3R_30320001	Sg4
2326	chr3R	30396191	30396246	chr3R	30404482	30404537	roo	7	8291	1.5	3.5	2.5	2.0	8346	chr3R	30396191	intergenic	not near genes	chr3R	30400364	intergenic	not near genes	chr3R	30404537	5` UTR	CR45570 +	chr3R_7_30400001	chr3R_30400001	Sg4
2330	chr3R	30480456	30480510	chr3R	30482949	30483003	jockey	21	2493	4.5	6.5	5.5	3.2	2547	chr3R	30480456	intron	PH4alphaEFB +	chr3R	30481730	intron	PH4alphaEFB +	chr3R	30483003	intron	PH4alphaEFB +	chr3R_21_30480001	chr3R_30480001	Sg4
2337	chr3R	30679509	30679549	chr3R	30687003	30687029	blood	8	7492	2.0	4.5	3.2	1.9	7520	chr3R	30679509	intergenic	not near genes	chr3R	30683269	intergenic	not near genes	chr3R	30687029	intergenic	not near genes	chr3R_8_30680001	chr3R_30680001	Sg4
2343	chr3R	30818786	30818828	chr3R	30820376	30820418	1360	9	1589	3.0	2.5	2.8	2.4	1632	chr3R	30818786	intron	cindr +	chr3R	30819602	intron	cindr +	chr3R	30820418	intron	cindr +	chr3R_9_30815001	chr3R_30815001	Sg4
2348	chr3R	31074219	31074250	chr3R	31081842	31081873	springer	5	7623	5.5	4.5	5.0	0.8	7654	chr3R	31074219	intron	Sox100B +	chr3R	31078046	intron	Sox100B +	chr3R	31081873	intron	Sox100B +	chr3R_5_31075001	chr3R_31075001	Sg4
2354	chr3R	31279349	31279396	chr3R	31285565	31285612	diver	13	6215	6.5	1.0	3.8	2.7	6263	chr3R	31279349	intergenic	not near genes	chr3R	31282480	intergenic	not near genes	chr3R	31285612	intergenic	not near genes	chr3R_13_31280001	chr3R_31280001	Sg4
2355	chr3R	31413069	31413083	chr3R	31418294	31418308	copia	4	5225	6.0	0.0	3.0	1.0	5239	chr3R	31413069	intron	Gprk2 +	chr3R	31415688	intron	Gprk2 +	chr3R	31418308	intron	Gprk2 +	chr3R_4_31415001	chr3R_31415001	Sg4
2356	chr3R	31413092	31413121	chr3R	31418290	31418315	copia	7	5209	2.5	0.0	1.2	3.2	5223	chr3R	31413092	intron	Gprk2 +	chr3R	31415704	intron	Gprk2 +	chr3R	31418315	intron	Gprk2 +	chr3R_7_31415001	chr3R_31415001	Sg4
2366	chr3R	31691515	31691559	chr3R	31696299	31696350	Doc	19	4790	4.5	7.0	5.8	2.8	4835	chr3R	31691515	intergenic	not near genes	chr3R	31693932	intergenic	not near genes	chr3R	31696350	intergenic	not near genes	chr3R_19_31690001	chr3R_31690001	Sg4
2376	chr3R	31997966	31998017	chr3R	32005461	32005512	blood	11	7494	5.0	2.5	3.8	2.3	7546	chr3R	31997966	intron	heph -	chr3R	32001739	intron	heph -	chr3R	32005512	intron	heph -	chr3R_11_32000001	chr3R_32000001	Sg4
2377	chr4	76476	76513	chr4	81944	81981	I-element	7	5468	2.0	2.0	2.0	2.3	5505	chr4	76476	intron	pan +	chr4	79228	intron	pan +	chr4	81981	intron	pan +	chr4_7_75001	chr4_75001	Sg4
2378	chr4	319978	320015	chr4	328179	328215	Stalker2	5	8200	1.5	3.0	2.2	1.6	8237	chr4	319978	3` UTR	CG32850 +	chr4	324096	intron	CG32850 +	chr4	328215	3` UTR,3` UTR	CG32850 +,PMCA -	chr4_5_320001	chr4_320001	Sg4
2380	chr4	671580	671592	chr4	680188	680200	Tirant	6	8608	26.0	8.0	17.0	0.3	8620	chr4	671580	intron	CG11360 +	chr4	675890	intron	CG11360 +	chr4	680200	intron	CG11360 +	chr4_6_675001	chr4_675001	Sg4
2381	chr4	671599	671630	chr4	680186	680238	Tirant	19	8605	13.5	6.5	10.0	1.7	8639	chr4	671599	intron	CG11360 +	chr4	675918	intron	CG11360 +	chr4	680238	intron	CG11360 +	chr4_19_675001	chr4_675001	Sg4
2382	chr4	654363	654409	chr4	699539	699585	Tirant	5	45177	20.5	21.0	20.8	0.2	45222	chr4	654363	intron	gw -	chr4	676974	intron	CG11360 +	chr4	699585	intron	ey +	chr4_5_675001	chr4_675001	Sg4
2386	chrX	295832	295880	chrX	303477	303525	412	4	7645	1.0	1.0	1.0	2.0	7693	chrX	295832	intron	CG3777 +	chrX	299678	intron	CG3777 +	chrX	303525	intron	CG3777 +	chrX_4_295001	chrX_295001	Sg4
2388	chrX	428402	428446	chrX	434612	434656	3S18	6	6210	1.0	1.0	1.0	3.0	6254	chrX	428402	intron	CG32816 -	chrX	431529	intron	CG32816 -	chrX	434656	intron	CG32816 -	chrX_6_430001	chrX_430001	Sg4
2389	chrX	551402	551454	chrX	558989	559022	412	20	7583	2.0	2.0	2.0	6.7	7620	chrX	551402	intron	Appl +	chrX	555212	intron	Appl +	chrX	559022	intron	Appl +	chrX_20_555001	chrX_555001	Sg4
2394	chrX	827579	827620	chrX	835396	835437	roo	7	7817	1.0	1.5	1.2	3.2	7858	chrX	827579	intron	CG43867 -	chrX	831508	intron	CG43867 -	chrX	835437	intron	CG43867 -	chrX_7_830001	chrX_830001	Sg4
2395	chrX	906690	906723	chrX	908504	908537	S-element	6	1812	5.0	4.5	4.8	1.0	1847	chrX	906690	intron	CG43867 -	chrX	907614	intron	CG43867 -	chrX	908537	intron	CG43867 -	chrX_6_905001	chrX_905001	Sg4
2401	chrX	1357764	1357805	chrX	1367959	1368000	Doc	5	10195	3.5	2.0	2.8	1.3	10236	chrX	1357764	intergenic	png -	chrX	1362882	intergenic	not near genes	chrX	1368000	intergenic	not near genes	chrX_5_1360001	chrX_1360001	Sg4
2402	chrX	1514004	1514008	chrX	1514458	1514468	1360	4	457	0.0	3.5	1.8	1.4	464	chrX	1514004	intron	inc +	chrX	1514236	intron	inc +	chrX	1514468	intron	inc +	chrX_4_1510001	chrX_1510001	Sg4
2403	chrX	1518017	1518059	chrX	1523444	1523479	jockey	7	5423	2.0	4.0	3.0	1.8	5462	chrX	1518017	intergenic	inc +	chrX	1520748	intergenic	not near genes	chrX	1523479	intergenic	not near genes	chrX_7_1520001	chrX_1520001	Sg4
2405	chrX	1954863	1954916	chrX	1962828	1962871	Stalker2	6	7962	2.0	3.0	2.5	1.7	8008	chrX	1954863	intron	Hr4 +	chrX	1958867	intron	Hr4 +	chrX	1962871	intron	Hr4 +	chrX_6_1955001	chrX_1955001	Sg4
2407	chrX	2399823	2399866	chrX	2408190	2408223	roo	6	8367	2.5	4.0	3.2	1.4	8400	chrX	2399823	intergenic	not near genes	chrX	2404023	intergenic	not near genes	chrX	2408223	intergenic	not near genes	chrX_6_2400001	chrX_2400001	Sg4
2413	chrX	3058003	3058051	chrX	3058269	3058317	pogo	4	265	2.0	3.5	2.8	1.1	314	chrX	3058003	intron	kirre +	chrX	3058160	intron	kirre +	chrX	3058317	intron	kirre +	chrX_4_3055001	chrX_3055001	Sg4
2416	chrX	3493071	3493110	chrX	3502255	3502294	roo	6	9184	2.0	1.0	1.5	2.4	9223	chrX	3493071	intron,intron	CR44999 +,Gas8 -	chrX	3497682	intron,intron	CR44999 +,Gas8 -	chrX	3502294	intron,intron	CR44999 +,Gas8 -	chrX_6_3495001	chrX_3495001	Sg4
2420	chrX	3597529	3597535	chrX	3619722	3619728	roo	4	22193	6.5	2.5	4.5	0.7	22199	chrX	3597529	intron	AstA-R1 +	chrX	3608628	intron	AstA-R1 +	chrX	3619728	intron	AstA-R1 +	chrX_4_3605001	chrX_3605001	Sg4
2421	chrX	3726738	3726784	chrX	3730160	3730196	NOF	7	3421	1.0	0.0	0.5	4.7	3458	chrX	3726738	intron	tlk +	chrX	3728467	intron	tlk +	chrX	3730196	intron	tlk +	chrX_7_3725001	chrX_3725001	Sg4
2426	chrX	3986843	3986862	chrX	3994501	3994519	412	7	7658	2.5	0.0	1.2	3.2	7676	chrX	3986843	intergenic	not near genes	chrX	3990681	intergenic	not near genes	chrX	3994519	intergenic	not near genes	chrX_7_3990001	chrX_3990001	Sg4
2428	chrX	4157874	4157917	chrX	4164952	4164995	297	4	7078	2.5	2.0	2.2	1.2	7121	chrX	4157874	intron	Fas2 -	chrX	4161434	intron	Fas2 -	chrX	4164995	intron	Fas2 -	chrX_4_4160001	chrX_4160001	Sg4
2434	chrX	4700376	4700424	chrX	4700744	4700792	jockey	4	368	1.0	1.5	1.2	1.8	416	chrX	4700376	3` UTR	ctp +	chrX	4700584	3` UTR	ctp +	chrX	4700792	3` UTR	ctp +	chrX_4_4700001	chrX_4700001	Sg4
2436	chrX	4763237	4763274	chrX	4763750	4763787	Stalker4	6	507	1.5	2.0	1.8	2.1	550	chrX	4763237	intergenic	not near genes	chrX	4763512	intergenic	not near genes	chrX	4763787	intergenic	not near genes	chrX_6_4760001	chrX_4760001	Sg4
2437	chrX	4792362	4792396	chrX	4792819	4792853	jockey	9	458	3.0	2.0	2.5	2.6	491	chrX	4792362	intergenic	not near genes	chrX	4792608	intergenic	not near genes	chrX	4792853	intergenic	not near genes	chrX_9_4790001	chrX_4790001	Sg4
2440	chrX	4990051	4990059	chrX	4997290	4997298	roo	4	7239	1.0	4.5	2.8	1.1	7247	chrX	4990051	intron	CR44833 -	chrX	4993674	intron	CR44833 -	chrX	4997298	intron	CR44833 -	chrX_4_4990001	chrX_4990001	Sg4
2441	chrX	5096260	5096304	chrX	5103849	5103887	springer	8	7586	1.0	5.5	3.2	1.9	7627	chrX	5096260	intron,intron	CG15465 +,rg +	chrX	5100074	intron,intron	CG15465 +,rg +	chrX	5103887	intron,intron	CG15465 +,rg +	chrX_8_5100001	chrX_5100001	Sg4
2445	chrX	5338687	5338723	chrX	5339965	5339996	jockey	5	1277	3.0	2.5	2.8	1.3	1309	chrX	5338687	intergenic	not near genes	chrX	5339342	intergenic	not near genes	chrX	5339996	intergenic	SK +	chrX_5_5335001	chrX_5335001	Sg4
2450	chrX	5727399	5727415	chrX	5732163	5732179	Doc	5	4764	1.0	2.0	1.5	2.0	4780	chrX	5727399	intron	CG32758 -	chrX	5729789	intron	CG32758 -	chrX	5732179	intron	CG32758 -	chrX_5_5725001	chrX_5725001	Sg4
2452	chrX	5883786	5883834	chrX	5884052	5884100	pogo	5	266	2.0	2.0	2.0	1.7	314	chrX	5883786	intron	CR45668 -	chrX	5883943	intron	CR45668 -	chrX	5884100	intron	CR45668 -	chrX_5_5880001	chrX_5880001	Sg4
2453	chrX	5884146	5884186	chrX	5884412	5884452	pogo	10	266	1.0	3.0	2.0	3.3	306	chrX	5884146	intron	CR45668 -	chrX	5884299	intron	CR45668 -	chrX	5884452	intron	CR45668 -	chrX_10_5880001	chrX_5880001	Sg4
2456	chrX	6171594	6171608	chrX	6179026	6179066	Quasimodo	4	7452	1.0	0.5	0.8	2.2	7472	chrX	6171594	intron	Ca-alpha1T -	chrX	6175330	intron	Ca-alpha1T -	chrX	6179066	intron	Ca-alpha1T -	chrX_4_6175001	chrX_6175001	Sg4
2458	chrX	6392850	6392896	chrX	6397640	6397686	Doc	6	4790	1.5	2.0	1.8	2.1	4836	chrX	6392850	intergenic	not near genes	chrX	6395268	intergenic	not near genes	chrX	6397686	intergenic	not near genes	chrX_6_6395001	chrX_6395001	Sg4
2461	chrX	6562797	6562850	chrX	6571304	6571341	Tirant	14	8505	5.0	7.0	6.0	2.0	8544	chrX	6562797	intron	CG34417 +	chrX	6567069	intron	CG34417 +	chrX	6571341	intron	CG34417 +	chrX_14_6565001	chrX_6565001	Sg4
2466	chrX	7023576	7023624	chrX	7030991	7031039	Tabor	5	7415	5.0	1.0	3.0	1.2	7463	chrX	7023576	intron	CG12541 -	chrX	7027308	intron	CG12541 -	chrX	7031039	intron	CG12541 -	chrX_5_7025001	chrX_7025001	Sg4
2468	chrX	7125225	7125272	chrX	7134409	7134456	roo	4	9184	0.0	0.5	0.2	3.3	9231	chrX	7125225	intergenic	not near genes	chrX	7129840	intergenic	not near genes	chrX	7134456	intergenic	not near genes	chrX_4_7125001	chrX_7125001	Sg4
2469	chrX	7845700	7845750	chrX	7847216	7847266	hopper2	7	1516	4.0	1.5	2.8	1.8	1566	chrX	7845700	intergenic	not near genes	chrX	7846483	intergenic	not near genes	chrX	7847266	intergenic	not near genes	chrX_7_7845001	chrX_7845001	Sg4
2470	chrX	8031411	8031455	chrX	8035745	8035779	Juan	8	4333	1.0	7.5	4.2	1.5	4368	chrX	8031411	intergenic	not near genes	chrX	8033595	intergenic	not near genes	chrX	8035779	3` UTR	CG2233 -	chrX_8_8030001	chrX_8030001	Sg4
2473	chrX	8364836	8364871	chrX	8365253	8365293	BS	5	421	2.0	5.0	3.5	1.1	457	chrX	8364836	intron	nAChRalpha3 -	chrX	8365064	intron	nAChRalpha3 -	chrX	8365293	intron	nAChRalpha3 -	chrX_5_8365001	chrX_8365001	Sg4
2479	chrX	8922308	8922352	chrX	8922767	8922803	jockey	10	457	3.5	4.0	3.8	2.1	495	chrX	8922308	intron	rdgA +	chrX	8922556	intron	rdgA +	chrX	8922803	intron	rdgA +	chrX_10_8920001	chrX_8920001	Sg4
2480	chrX	8948748	8948786	chrX	8956283	8956321	roo	4	7535	1.5	1.5	1.5	1.6	7573	chrX	8948748	intron	rdgA +	chrX	8952534	intron	rdgA +	chrX	8956321	intron	rdgA +	chrX_4_8950001	chrX_8950001	Sg4
2484	chrX	9508116	9508160	chrX	9509659	9509703	jockey	7	1543	3.5	2.5	3.0	1.8	1587	chrX	9508116	intron	CG32700 -	chrX	9508910	intron	CG32700 -	chrX	9509703	intron	CG32700 -	chrX_7_9505001	chrX_9505001	Sg4
2485	chrX	9575770	9575819	chrX	9576119	9576168	mdg3	5	347	4.5	0.5	2.5	1.4	398	chrX	9575770	intron,exon	CG32699 -,CG42395 -	chrX	9575969	intron,intron	CG32699 -,CG42395 -	chrX	9576168	intron,5` UTR	CG32699 -,CG42395 -	chrX_5_9575001	chrX_9575001	Sg4
2491	chrX	10267302	10267324	chrX	10276476	10276499	roo	5	9175	0.0	0.5	0.2	4.2	9197	chrX	10267302	3` UTR	alpha-Man-I -	chrX	10271900	intron	alpha-Man-I -	chrX	10276499	3` UTR	alpha-Man-I -	chrX_5_10270001	chrX_10270001	Sg4
2496	chrX	10550835	10550880	chrX	10552327	10552372	hobo	7	1492	1.5	1.5	1.5	2.8	1537	chrX	10550835	intron	spri -	chrX	10551604	intron	spri -	chrX	10552372	intron	spri -	chrX_7_10550001	chrX_10550001	Sg4
2497	chrX	10686029	10686082	chrX	10691188	10691244	roo	9	5161	1.5	0.5	1.0	4.5	5215	chrX	10686029	intron	X11Lbeta +	chrX	10688636	intron	X11Lbeta +	chrX	10691244	intron	X11Lbeta +	chrX_9_10685001	chrX_10685001	Sg4
2498	chrX	10772649	10772696	chrX	10772757	10772803	Tirant	9	106	2.0	2.5	2.2	2.8	154	chrX	10772649	intron	CG15211 +	chrX	10772726	intron	CG15211 +	chrX	10772803	intron	CG15211 +	chrX_9_10770001	chrX_10770001	Sg4
2500	chrX	11095975	11096023	chrX	11103102	11103150	HMS-Beagle	8	7127	1.5	1.5	1.5	3.2	7175	chrX	11095975	intergenic	not near genes	chrX	11099562	intergenic	not near genes	chrX	11103150	intron	CG42249 +	chrX_8_11095001	chrX_11095001	Sg4
2502	chrX	11184228	11184277	chrX	11189329	11189378	flea	4	5101	3.5	2.0	2.8	1.1	5150	chrX	11184228	intergenic	not near genes	chrX	11186803	intergenic	not near genes	chrX	11189378	intergenic	not near genes	chrX_4_11185001	chrX_11185001	Sg4
2504	chrX	11312042	11312081	chrX	11319420	11319444	Stalker2	6	7370	2.0	4.0	3.0	1.5	7402	chrX	11312042	intergenic	not near genes	chrX	11315743	intergenic	not near genes	chrX	11319444	intergenic	not near genes	chrX_6_11315001	chrX_11315001	Sg4
2507	chrX	11633400	11633446	chrX	11640479	11640525	297	7	7079	4.5	3.5	4.0	1.4	7125	chrX	11633400	intron	Ptp10D +	chrX	11636962	intron	Ptp10D +	chrX	11640525	intron	Ptp10D +	chrX_7_11635001	chrX_11635001	Sg4
2508	chrX	11645092	11645134	chrX	11648286	11648329	NOF	4	3194	1.0	1.0	1.0	2.0	3237	chrX	11645092	intron	Ptp10D +	chrX	11646710	intron	Ptp10D +	chrX	11648329	intron	Ptp10D +	chrX_4_11645001	chrX_11645001	Sg4
2514	chrX	12168119	12168153	chrX	12173586	12173620	I-element	10	5466	1.0	4.5	2.8	2.6	5501	chrX	12168119	intron	Ten-a +	chrX	12170870	intron	Ten-a +	chrX	12173620	intron	Ten-a +	chrX_10_12170001	chrX_12170001	Sg4
2519	chrX	12930576	12930605	chrX	12937717	12937746	HMS-Beagle	4	7141	2.0	7.0	4.5	0.7	7170	chrX	12930576	intron	fne +	chrX	12934161	intron	fne +	chrX	12937746	intron	fne +	chrX_4_12930001	chrX_12930001	Sg4
2526	chrX	13401475	13401519	chrX	13401852	13401896	jockey	4	377	1.0	1.5	1.2	1.8	421	chrX	13401475	intergenic	CG1673 +,CG12725 -	chrX	13401686	intergenic	CG12725 -,CG1673 +	chrX	13401896	3` UTR	CG12725 -	chrX_4_13400001	chrX_13400001	Sg4
2527	chrX	13429457	13429485	chrX	13430631	13430659	jockey	5	1174	1.0	1.0	1.0	2.5	1202	chrX	13429457	intergenic	not near genes	chrX	13430058	intergenic	not near genes	chrX	13430659	intergenic	not near genes	chrX_5_13430001	chrX_13430001	Sg4
2530	chrX	13463624	13463676	chrX	13469226	13469278	mdg3	11	5602	1.5	2.0	1.8	3.9	5654	chrX	13463624	intron	Neto +	chrX	13466451	intron	Neto +	chrX	13469278	intron	Neto +	chrX_11_13465001	chrX_13465001	Sg4
2536	chrX	13937968	13937995	chrX	13941264	13941291	I-element	5	3296	1.0	3.5	2.2	1.6	3323	chrX	13937968	intron	mamo -	chrX	13939630	intron	mamo -	chrX	13941291	intron	mamo -	chrX_5_13935001	chrX_13935001	Sg4
2538	chrX	14105002	14105044	chrX	14114178	14114220	roo	7	9176	3.0	5.5	4.2	1.3	9218	chrX	14105002	intergenic	not near genes	chrX	14109611	intergenic	not near genes	chrX	14114220	5` UTR	CR44657 +	chrX_7_14105001	chrX_14105001	Sg4
2544	chrX	14778017	14778052	chrX	14782839	14782874	Doc	5	4822	1.5	1.5	1.5	2.0	4857	chrX	14778017	intergenic	CG5347 +	chrX	14780446	intergenic	not near genes	chrX	14782874	intergenic	Ag5r2 -	chrX_5_14780001	chrX_14780001	Sg4
2546	chrX	14818740	14818793	chrX	14823969	14824022	copia	5	5229	4.0	4.0	4.0	1.0	5282	chrX	14818740	intron	rut -	chrX	14821381	intron	rut -	chrX	14824022	intron	rut -	chrX_5_14820001	chrX_14820001	Sg4
2547	chrX	14936839	14936886	chrX	14946121	14946168	roo	5	9282	1.0	1.0	1.0	2.5	9329	chrX	14936839	intron	pdgy -	chrX	14941504	intron	pdgy -	chrX	14946168	intron	pdgy -	chrX_5_14940001	chrX_14940001	Sg4
2554	chrX	15273704	15273730	chrX	15274896	15274905	1360	6	1187	6.0	4.0	5.0	1.0	1201	chrX	15273704	intergenic	not near genes	chrX	15274304	intergenic	not near genes	chrX	15274905	intergenic	not near genes	chrX_6_15270001	chrX_15270001	Sg4
2555	chrX	15413038	15413074	chrX	15417364	15417401	Juan	6	4326	6.0	3.5	4.8	1.0	4363	chrX	15413038	intron	Cngl -	chrX	15415220	intron	Cngl -	chrX	15417401	intron	Cngl -	chrX_6_15415001	chrX_15415001	Sg4
2556	chrX	15421895	15421949	chrX	15423431	15423485	pogo	6	1536	0.5	0.0	0.2	5.0	1590	chrX	15421895	intron	Cngl -	chrX	15422690	intron	Cngl -	chrX	15423485	intron	Cngl -	chrX_6_15420001	chrX_15420001	Sg4
2563	chrX	16340658	16340696	chrX	16349838	16349878	roo	4	9181	0.0	0.5	0.2	3.3	9220	chrX	16340658	intergenic	Dsp1 +	chrX	16345268	intergenic	not near genes	chrX	16349878	intergenic	sl +	chrX_4_16345001	chrX_16345001	Sg4
2564	chrX	16492629	16492675	chrX	16498224	16498277	mdg3	14	5601	2.5	4.0	3.2	3.3	5648	chrX	16492629	intron	para -	chrX	16495453	intron	para -	chrX	16498277	exon	para -	chrX_14_16495001	chrX_16495001	Sg4
2566	chrX	17057913	17057943	chrX	17058179	17058209	pogo	4	266	2.5	1.0	1.8	1.4	296	chrX	17057913	intron	CG45002 -	chrX	17058061	intron	CG45002 -	chrX	17058209	intron	CG45002 -	chrX_4_17055001	chrX_17055001	Sg4
2567	chrX	17195192	17195231	chrX	17200303	17200342	flea	6	5110	2.0	2.0	2.0	2.0	5150	chrX	17195192	3` UTR	baz +	chrX	17197767	3` UTR	baz +	chrX	17200342	3` UTR	baz +	chrX_6_17195001	chrX_17195001	Sg4
2575	chrX	18194071	18194100	chrX	18194631	18194658	BS	5	560	2.5	6.0	4.2	1.0	587	chrX	18194071	intron	Frq2 +	chrX	18194364	intron	Frq2 +	chrX	18194658	intron	Frq2 +	chrX_5_18190001	chrX_18190001	Sg4
2577	chrX	18429483	18429494	chrX	18434819	18434830	Transpac	4	5336	4.5	2.5	3.5	0.9	5347	chrX	18429483	intergenic	not near genes	chrX	18432156	intergenic	not near genes	chrX	18434830	intergenic	not near genes	chrX_4_18430001	chrX_18430001	Sg4
2586	chrX	19060386	19060436	chrX	19065195	19065245	Doc	7	4809	1.0	2.5	1.8	2.5	4859	chrX	19060386	intron	CG14190 +	chrX	19062816	intron	CG14190 +	chrX	19065245	intron	CG14190 +	chrX_7_19060001	chrX_19060001	Sg4
2590	chrX	19136528	19136579	chrX	19143473	19143523	412	7	6944	3.0	2.0	2.5	2.0	6995	chrX	19136528	intergenic	not near genes	chrX	19140026	intergenic	not near genes	chrX	19143523	3` UTR	RhoGAP18B -	chrX_7_19140001	chrX_19140001	Sg4
2593	chrX	19380138	19380166	chrX	19380404	19380432	pogo	6	265	3.5	0.5	2.0	2.0	294	chrX	19380138	intron	kek5 +	chrX	19380285	intron	kek5 +	chrX	19380432	intron	kek5 +	chrX_6_19380001	chrX_19380001	Sg4
2596	chrX	19472104	19472154	chrX	19472699	19472748	jockey	7	584	2.0	2.5	2.2	2.2	644	chrX	19472104	intergenic	kek5 +	chrX	19472426	intergenic	not near genes	chrX	19472748	intergenic	not near genes	chrX_7_19470001	chrX_19470001	Sg4
2601	chrX	19710050	19710097	chrX	19711861	19711908	S-element	13	1810	5.5	2.0	3.8	2.7	1858	chrX	19710050	intron	meso18E -	chrX	19710979	intron	meso18E -	chrX	19711908	intron	meso18E -	chrX_13_19710001	chrX_19710001	Sg4
2605	chrX	19797325	19797337	chrX	19804663	19804675	Stalker4	5	7336	4.5	0.0	2.2	1.6	7350	chrX	19797325	intergenic	not near genes	chrX	19801000	intergenic	not near genes	chrX	19804675	intergenic	not near genes	chrX_5_19800001	chrX_19800001	Sg4
2618	chrX	20504105	20504153	chrX	20505651	20505699	transib2	12	1546	2.0	2.5	2.2	3.8	1594	chrX	20504105	intron	RhoGAP19D -	chrX	20504902	intron	RhoGAP19D -	chrX	20505699	intron	RhoGAP19D -	chrX_12_20500001	chrX_20500001	Sg4
2621	chrX	20836704	20836737	chrX	20844331	20844364	roo	5	7627	1.0	0.5	0.8	2.8	7660	chrX	20836704	intron	shakB -	chrX	20840534	intron	shakB -	chrX	20844364	intron	shakB -	chrX_5_20840001	chrX_20840001	Sg4
2623	chrX	20940699	20940739	chrX	20942193	20942233	hobo	5	1494	3.0	0.5	1.8	1.8	1534	chrX	20940699	intergenic	not near genes	chrX	20941466	intergenic	not near genes	chrX	20942233	intergenic	not near genes	chrX_5_20940001	chrX_20940001	Sg4
2625	chrX	22996293	22996337	chrX	23003549	23003596	roo	8	7259	2.0	2.0	2.0	2.7	7303	chrX	22996293	intron,intron	stnA -,stnB -	chrX	22999944	intron,intron	stnA -,stnB -	chrX	23003596	intron,intron	stnA -,stnB -	chrX_8_22995001	chrX_22995001	Sg4