SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 12973 13015 chr2L 13134 13176 9 162 29.5 18.0 23.8 0.4 203 chr2L 12973 intron l(2)gl - chr2L 13074 intron l(2)gl - chr2L 13176 intron l(2)gl - chr2L_9_10001 chr2L_10001 Sg4 2 chr2L 47440 47481 chr2L 52570 52611 jockey 28 5130 10.5 10.0 10.2 2.5 5171 chr2L 47440 intron Cda5 - chr2L 50026 intron Cda5 - chr2L 52611 intron Cda5 - chr2L_28_50001 chr2L_50001 Sg4 3 chr2L 45963 46010 chr2L 53372 53419 jockey 17 7410 27.5 22.0 24.8 0.7 7456 chr2L 45963 intron Cda5 - chr2L 49691 intron Cda5 - chr2L 53419 intron Cda5 - chr2L_17_45001 chr2L_45001 Sg4 4 chr2L 128073 128125 chr2L 128290 128342 17 212 2.0 5.0 3.5 3.8 269 chr2L 128073 intron,intron CG11455 +,CG3164 - chr2L 128208 intron,intron CG11455 +,CG3164 - chr2L 128342 intron,intron CG11455 +,CG3164 - chr2L_17_125001 chr2L_125001 Sg4 5 chr2L 314258 314288 chr2L 314369 314399 5 111 5.0 1.0 3.0 1.2 141 chr2L 314258 intron Plc21C + chr2L 314328 intron Plc21C + chr2L 314399 intron Plc21C + chr2L_5_310001 chr2L_310001 Sg4 6 chr2L 325133 325150 chr2L 325207 325242 4 90 5.0 3.5 4.2 0.8 109 chr2L 325133 intron Plc21C + chr2L 325188 intron Plc21C + chr2L 325242 intron Plc21C + chr2L_4_325001 chr2L_325001 Sg4 7 chr2L 347868 347912 chr2L 355393 355437 blood 10 7525 4.0 2.0 3.0 2.5 7569 chr2L 347868 3` UTR Plc21C + chr2L 351652 intron Plc21C + chr2L 355437 3` UTR Plc21C + chr2L_10_350001 chr2L_350001 Sg4 8 chr2L 371422 371458 chr2L 371526 371562 9 104 2.0 3.0 2.5 2.6 140 chr2L 371422 intergenic not near genes chr2L 371492 intergenic not near genes chr2L 371562 intergenic not near genes chr2L_9_370001 chr2L_370001 Sg4 9 chr2L 467337 467359 chr2L 467461 467483 10 124 5.0 15.5 10.2 0.9 146 chr2L 467337 intron CG4297 - chr2L 467410 intron CG4297 - chr2L 467483 intron CG4297 - chr2L_10_465001 chr2L_465001 Sg4 10 chr2L 602249 602275 chr2L 602387 602413 7 138 3.0 7.0 5.0 1.2 164 chr2L 602249 intergenic not near genes chr2L 602331 intergenic CG13689 + chr2L 602413 intergenic CG13689 + chr2L_7_600001 chr2L_600001 Sg4 11 chr2L 666258 666306 chr2L 666359 666405 12 101 2.0 0.0 1.0 6.0 147 chr2L 666258 intron ds - chr2L 666332 intron ds - chr2L 666405 intron ds - chr2L_12_665001 chr2L_665001 Sg4 12 chr2L 686913 686939 chr2L 695978 696004 roo 6 9065 5.0 4.5 4.8 1.0 9091 chr2L 686913 intron ds - chr2L 691458 intron ds - chr2L 696004 intron ds - chr2L_6_690001 chr2L_690001 Sg4 13 chr2L 736865 736901 chr2L 736995 737031 12 130 1.5 5.0 3.2 2.9 166 chr2L 736865 intergenic Eaat2 - chr2L 736948 intergenic Eaat2 - chr2L 737031 intergenic Eaat2 - chr2L_12_735001 chr2L_735001 Sg4 14 chr2L 764531 764575 chr2L 764656 764700 13 125 2.0 4.5 3.2 3.1 169 chr2L 764531 intergenic not near genes chr2L 764616 intergenic not near genes chr2L 764700 intergenic not near genes chr2L_13_760001 chr2L_760001 Sg4 15 chr2L 770438 770488 chr2L 772244 772294 Bari1 17 1805 2.0 4.5 3.2 4.0 1856 chr2L 770438 intergenic not near genes chr2L 771366 intergenic not near genes chr2L 772294 intergenic CR44614 + chr2L_17_770001 chr2L_770001 Sg4 16 chr2L 795242 795252 chr2L 795372 795372 4 124 7.5 0.0 3.8 0.8 130 chr2L 795242 intergenic not near genes chr2L 795307 intergenic not near genes chr2L 795372 intergenic not near genes chr2L_4_795001 chr2L_795001 Sg4 17 chr2L 877819 877823 chr2L 877925 877929 5 106 13.5 4.0 8.8 0.5 110 chr2L 877819 3` UTR,exon CG15824 -,ninaA + chr2L 877874 3` UTR,intron CG15824 -,ninaA + chr2L 877929 3` UTR,intron CG15824 -,ninaA + chr2L_5_875001 chr2L_875001 Sg4 18 chr2L 877825 877877 chr2L 877921 877983 11 105 2.0 4.0 3.0 2.8 158 chr2L 877825 3` UTR,exon CG15824 -,ninaA + chr2L 877904 3` UTR,intron CG15824 -,ninaA + chr2L 877983 3` UTR,exon CG15824 -,ninaA + chr2L_11_875001 chr2L_875001 Sg4 19 chr2L 964548 964574 chr2L 964657 964683 10 109 1.5 3.5 2.5 2.9 135 chr2L 964548 intergenic not near genes chr2L 964616 intergenic not near genes chr2L 964683 intergenic not near genes chr2L_10_960001 chr2L_960001 Sg4 20 chr2L 976855 976913 chr2L 984516 984574 roo 4 7661 0.5 2.5 1.5 1.6 7719 chr2L 976855 intergenic not near genes chr2L 980714 intergenic not near genes chr2L 984574 intergenic not near genes chr2L_4_980001 chr2L_980001 Sg4 21 chr2L 996706 996742 chr2L 1005826 1005862 roo 6 9118 1.0 2.0 1.5 2.4 9156 chr2L 996706 intergenic not near genes chr2L 1001284 intergenic not near genes chr2L 1005862 intergenic not near genes chr2L_6_1000001 chr2L_1000001 Sg4 22 chr2L 1026174 1026180 chr2L 1026275 1026281 4 101 5.0 4.5 4.8 0.7 107 chr2L 1026174 intron,3` UTR IA-2 -,CG4375 - chr2L 1026228 intron,3` UTR IA-2 -,CG4375 - chr2L 1026281 intron,exon IA-2 -,CG4375 - chr2L_4_1025001 chr2L_1025001 Sg4 23 chr2L 1028840 1028871 chr2L 1028948 1028996 13 110 3.0 2.0 2.5 3.7 156 chr2L 1028840 intron IA-2 - chr2L 1028918 intron IA-2 - chr2L 1028996 intron IA-2 - chr2L_13_1025001 chr2L_1025001 Sg4 24 chr2L 1035534 1035588 chr2L 1035636 1035690 17 102 3.5 4.0 3.8 3.5 156 chr2L 1035534 intron IA-2 - chr2L 1035612 intron IA-2 - chr2L 1035690 intron IA-2 - chr2L_17_1035001 chr2L_1035001 Sg4 25 chr2L 1156460 1156513 chr2L 1156707 1156760 16 246 6.0 2.0 4.0 3.2 300 chr2L 1156460 intron capt - chr2L 1156610 intron capt - chr2L 1156760 intron capt - chr2L_16_1155001 chr2L_1155001 Sg4 26 chr2L 1157606 1157660 chr2L 1159292 1159346 26 1693 38.5 55.0 46.8 0.5 1740 chr2L 1157606 intron capt - chr2L 1158476 intergenic CR43767 -,Tango14 +,capt - chr2L 1159346 3` UTR,exon CR43767 -,Tango14 + chr2L_26_1155001 chr2L_1155001 Sg4 27 chr2L 1220107 1220152 chr2L 1227598 1227643 blood 13 7491 9.0 6.0 7.5 1.5 7536 chr2L 1220107 intron CG42329 + chr2L 1223875 intron CG42329 + chr2L 1227643 intron CG42329 + chr2L_13_1220001 chr2L_1220001 Sg4 28 chr2L 1261136 1261243 chr2L 1261243 1261349 12 106 0.0 0.0 0.0 12.0 213 chr2L 1261136 intron robo3 + chr2L 1261242 intron robo3 + chr2L 1261349 intron robo3 + chr2L_12_1260001 chr2L_1260001 Sg4 29 chr2L 1275832 1275885 chr2L 1278897 1278949 15 3065 4.5 4.0 4.2 2.9 3117 chr2L 1275832 intron robo3 + chr2L 1277390 intron robo3 + chr2L 1278949 intron robo3 + chr2L_15_1275001 chr2L_1275001 Sg4 30 chr2L 1321999 1322047 chr2L 1322113 1322116 13 106 1.5 4.0 2.8 3.4 117 chr2L 1321999 intergenic not near genes chr2L 1322058 intergenic not near genes chr2L 1322116 intergenic not near genes chr2L_13_1320001 chr2L_1320001 Sg4 31 chr2L 1343509 1343555 chr2L 1343727 1343773 12 218 4.0 4.0 4.0 2.4 264 chr2L 1343509 exon CG33922 - chr2L 1343641 intron CG33922 - chr2L 1343773 exon CG33922 - chr2L_12_1340001 chr2L_1340001 Sg4 32 chr2L 1503408 1503447 chr2L 1503511 1503550 9 103 4.5 4.5 4.5 1.6 142 chr2L 1503408 intron CR44064 + chr2L 1503479 intron CR44064 + chr2L 1503550 intron CR44064 + chr2L_9_1500001 chr2L_1500001 Sg4 33 chr2L 1536470 1536523 chr2L 1536627 1536680 11 156 0.0 4.0 2.0 3.7 210 chr2L 1536470 intergenic not near genes chr2L 1536575 intergenic not near genes chr2L 1536680 intergenic not near genes chr2L_11_1535001 chr2L_1535001 Sg4 34 chr2L 1564450 1564483 chr2L 1564562 1564593 8 112 4.0 4.0 4.0 1.6 143 chr2L 1564450 intron haf + chr2L 1564522 intron haf + chr2L 1564593 intron haf + chr2L_8_1560001 chr2L_1560001 Sg4 35 chr2L 1570669 1570717 chr2L 1573566 1573614 F-element 16 2896 5.5 5.5 5.5 2.5 2945 chr2L 1570669 intron haf + chr2L 1572142 intron haf + chr2L 1573614 intron haf + chr2L_16_1570001 chr2L_1570001 Sg4 36 chr2L 1634740 1634751 chr2L 1634856 1634867 6 115 9.0 4.0 6.5 0.8 127 chr2L 1634740 intergenic not near genes chr2L 1634804 intergenic not near genes chr2L 1634867 intergenic not near genes chr2L_6_1630001 chr2L_1630001 Sg4 37 chr2L 1635393 1635427 chr2L 1635554 1635588 5 160 1.0 7.5 4.2 1.0 195 chr2L 1635393 intergenic not near genes chr2L 1635490 intergenic not near genes chr2L 1635588 intergenic not near genes chr2L_5_1635001 chr2L_1635001 Sg4 38 chr2L 1662008 1662023 chr2L 1662118 1662133 6 110 5.5 4.5 5.0 1.0 125 chr2L 1662008 intron chinmo + chr2L 1662070 intron chinmo + chr2L 1662133 intron chinmo + chr2L_6_1660001 chr2L_1660001 Sg4 39 chr2L 1678932 1679002 chr2L 1686440 1686491 blood 11 7501 0.5 3.0 1.8 3.9 7559 chr2L 1678932 intron chinmo + chr2L 1682712 intron chinmo + chr2L 1686491 intron chinmo + chr2L_11_1680001 chr2L_1680001 Sg4 40 chr2L 1711336 1711339 chr2L 1711685 1711688 mdg3 5 349 16.5 8.5 12.5 0.4 352 chr2L 1711336 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711512 3` UTR frtz - chr2L 1711688 3` UTR frtz - chr2L_5_1710001 chr2L_1710001 Sg4 41 chr2L 1711344 1711388 chr2L 1711682 1711731 mdg3 23 346 9.5 8.5 9.0 2.3 387 chr2L 1711344 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711538 3` UTR frtz - chr2L 1711731 3` UTR frtz - chr2L_23_1710001 chr2L_1710001 Sg4 42 chr2L 1721813 1721848 chr2L 1721922 1721957 4 109 0.0 6.5 3.2 1.0 144 chr2L 1721813 intron Rim2 - chr2L 1721885 intron Rim2 - chr2L 1721957 intron Rim2 - chr2L_4_1720001 chr2L_1720001 Sg4 43 chr2L 1831778 1831833 chr2L 1832850 1832906 15 1072 4.0 4.0 4.0 3.0 1128 chr2L 1831778 3` UTR,3` UTR c-cup -,mir-2280 - chr2L 1832342 exon c-cup - chr2L 1832906 intergenic c-cup - chr2L_15_1830001 chr2L_1830001 Sg4 44 chr2L 1878220 1878263 chr2L 1878369 1878412 13 149 2.5 1.0 1.8 4.6 192 chr2L 1878220 intron CG31663 - chr2L 1878316 intron CG31663 - chr2L 1878412 intron CG31663 - chr2L_13_1875001 chr2L_1875001 Sg4 45 chr2L 1883396 1883447 chr2L 1884003 1884052 11 606 1.5 1.0 1.2 5.0 656 chr2L 1883396 intron CG15358 - chr2L 1883724 intron CG15358 - chr2L 1884052 exon CG15358 - chr2L_11_1880001 chr2L_1880001 Sg4 46 chr2L 1910514 1910567 chr2L 1910628 1910679 8 114 3.5 2.5 3.0 2.0 165 chr2L 1910514 intron CG7337 + chr2L 1910596 intron CG7337 + chr2L 1910679 intron CG7337 + chr2L_8_1910001 chr2L_1910001 Sg4 47 chr2L 1957926 1957954 chr2L 1958032 1958060 10 106 5.5 7.0 6.2 1.4 134 chr2L 1957926 intron erm - chr2L 1957993 intron erm - chr2L 1958060 intron erm - chr2L_10_1955001 chr2L_1955001 Sg4 48 chr2L 2004817 2004874 chr2L 2005285 2005342 12 468 2.5 2.0 2.2 3.8 525 chr2L 2004817 intron CG33543 - chr2L 2005080 intron CG33543 - chr2L 2005342 intron CG33543 - chr2L_12_2005001 chr2L_2005001 Sg4 49 chr2L 2073323 2073338 chr2L 2073431 2073446 4 108 10.5 15.5 13.0 0.3 123 chr2L 2073323 intron dpr3 - chr2L 2073384 intron dpr3 - chr2L 2073446 intron dpr3 - chr2L_4_2070001 chr2L_2070001 Sg4 50 chr2L 2100382 2100388 chr2L 2109546 2109554 roo 4 9168 6.5 8.0 7.2 0.5 9172 chr2L 2100382 intron dpr3 - chr2L 2104968 intron dpr3 - chr2L 2109554 intron dpr3 - chr2L_4_2100001 chr2L_2100001 Sg4 51 chr2L 2100389 2100405 chr2L 2109545 2109551 roo 8 9163 4.0 8.0 6.0 1.1 9162 chr2L 2100389 intron dpr3 - chr2L 2104970 intron dpr3 - chr2L 2109551 intron dpr3 - chr2L_8_2100001 chr2L_2100001 Sg4 52 chr2L 2112119 2112146 chr2L 2119775 2119775 opus 9 7663 1.5 6.0 3.8 1.9 7656 chr2L 2112119 intergenic not near genes chr2L 2115947 intergenic not near genes chr2L 2119775 intergenic not near genes chr2L_9_2115001 chr2L_2115001 Sg4 53 chr2L 2250393 2250441 chr2L 2251185 2251223 9 789 4.5 0.0 2.2 2.8 830 chr2L 2250393 intergenic Ser12 - chr2L 2250808 exon Ser12 - chr2L 2251223 exon Ser12 - chr2L_9_2250001 chr2L_2250001 Sg4 54 chr2L 2256447 2256478 chr2L 2256552 2256582 7 105 2.5 6.5 4.5 1.3 135 chr2L 2256447 intergenic not near genes chr2L 2256514 intergenic not near genes chr2L 2256582 intergenic not near genes chr2L_7_2255001 chr2L_2255001 Sg4 55 chr2L 2260789 2260833 chr2L 2260900 2260944 15 110 3.0 5.0 4.0 3.0 155 chr2L 2260789 intergenic not near genes chr2L 2260866 intergenic not near genes chr2L 2260944 intergenic not near genes chr2L_15_2260001 chr2L_2260001 Sg4 56 chr2L 2294030 2294075 chr2L 2299245 2299272 copia 19 5221 3.5 5.0 4.2 3.7 5242 chr2L 2294030 intergenic not near genes chr2L 2296651 intergenic not near genes chr2L 2299272 intergenic not near genes chr2L_19_2295001 chr2L_2295001 Sg4 57 chr2L 2348088 2348130 chr2L 2348195 2348237 9 100 4.0 2.0 3.0 2.2 149 chr2L 2348088 intron,intron CG9967 -,eys + chr2L 2348162 intron,intron CG9967 -,eys + chr2L 2348237 intron,intron CG9967 -,eys + chr2L_9_2345001 chr2L_2345001 Sg4 58 chr2L 2361413 2361466 chr2L 2361779 2361832 14 365 3.0 8.0 5.5 2.2 419 chr2L 2361413 exon Rab5 - chr2L 2361622 intron Rab5 - chr2L 2361832 intron Rab5 - chr2L_14_2360001 chr2L_2360001 Sg4 59 chr2L 2372339 2372370 chr2L 2372450 2372481 7 111 3.0 4.5 3.8 1.5 142 chr2L 2372339 intergenic CG3609 - chr2L 2372410 intergenic CG3609 - chr2L 2372481 3` UTR CG3609 - chr2L_7_2370001 chr2L_2370001 Sg4 60 chr2L 2475657 2475701 chr2L 2475767 2475811 12 100 2.0 2.0 2.0 4.0 154 chr2L 2475657 intergenic not near genes chr2L 2475734 intergenic not near genes chr2L 2475811 intergenic not near genes chr2L_12_2475001 chr2L_2475001 Sg4 61 chr2L 2504214 2504233 chr2L 2504307 2504336 6 101 2.5 7.0 4.8 1.0 122 chr2L 2504214 intergenic not near genes chr2L 2504275 intergenic not near genes chr2L 2504336 intergenic not near genes chr2L_6_2500001 chr2L_2500001 Sg4 62 chr2L 2543455 2543506 chr2L 2543588 2543639 15 132 4.0 3.5 3.8 3.1 184 chr2L 2543455 intergenic not near genes chr2L 2543547 intergenic not near genes chr2L 2543639 intergenic not near genes chr2L_15_2540001 chr2L_2540001 Sg4 63 chr2L 2565534 2565566 chr2L 2571620 2571659 297 9 6091 8.0 3.0 5.5 1.4 6125 chr2L 2565534 exon Cyp309a2 - chr2L 2568596 intron Cyp309a2 - chr2L 2571659 exon Cyp309a2 - chr2L_9_2565001 chr2L_2565001 Sg4 64 chr2L 2587791 2587846 chr2L 2587895 2587950 22 100 2.0 4.5 3.2 5.2 159 chr2L 2587791 intergenic not near genes chr2L 2587870 intergenic not near genes chr2L 2587950 intergenic not near genes chr2L_22_2585001 chr2L_2585001 Sg4 65 chr2L 2618020 2618048 chr2L 2618124 2618152 6 104 5.5 3.5 4.5 1.1 132 chr2L 2618020 intergenic not near genes chr2L 2618086 intergenic not near genes chr2L 2618152 intergenic not near genes chr2L_6_2615001 chr2L_2615001 Sg4 66 chr2L 2618334 2618378 chr2L 2618458 2618502 13 123 4.5 7.5 6.0 1.9 168 chr2L 2618334 intergenic not near genes chr2L 2618418 intergenic not near genes chr2L 2618502 intergenic not near genes chr2L_13_2615001 chr2L_2615001 Sg4 67 chr2L 2661183 2661227 chr2L 2663045 2663055 I-element 15 1854 3.0 5.5 4.2 2.9 1872 chr2L 2661183 intergenic not near genes chr2L 2662119 intergenic not near genes chr2L 2663055 intergenic not near genes chr2L_15_2660001 chr2L_2660001 Sg4 68 chr2L 2698840 2698895 chr2L 2698952 2699006 18 111 0.0 3.0 1.5 7.2 166 chr2L 2698840 intron CG31690 + chr2L 2698923 intron CG31690 + chr2L 2699006 intron CG31690 + chr2L_18_2695001 chr2L_2695001 Sg4 69 chr2L 2772603 2772622 chr2L 2779210 2779231 297 4 6607 4.5 8.5 6.5 0.5 6628 chr2L 2772603 3` UTR Syt1 - chr2L 2775917 intron Syt1 - chr2L 2779231 3` UTR Syt1 - chr2L_4_2775001 chr2L_2775001 Sg4 70 chr2L 2793920 2793958 chr2L 2794025 2794063 9 105 7.5 2.5 5.0 1.5 143 chr2L 2793920 intron Syt1 - chr2L 2793992 intron Syt1 - chr2L 2794063 intron Syt1 - chr2L_9_2790001 chr2L_2790001 Sg4 71 chr2L 2826513 2826575 chr2L 2826630 2826685 10 115 3.0 2.0 2.5 2.9 172 chr2L 2826513 intron Duox - chr2L 2826599 intron Duox - chr2L 2826685 intron Duox - chr2L_10_2825001 chr2L_2825001 Sg4 72 chr2L 2937396 2937448 chr2L 2937497 2937550 8 102 1.5 3.0 2.2 2.5 154 chr2L 2937396 intron lilli + chr2L 2937473 intron lilli + chr2L 2937550 intron lilli + chr2L_8_2935001 chr2L_2935001 Sg4 73 chr2L 3026214 3026266 chr2L 3026870 3026897 17 639 32.0 40.5 36.2 0.5 683 chr2L 3026214 3` UTR CG3542 + chr2L 3026556 3` UTR CG3605 - chr2L 3026897 exon CG3605 - chr2L_17_3025001 chr2L_3025001 Sg4 74 chr2L 3044879 3044928 chr2L 3045001 3045050 20 117 6.0 6.0 6.0 2.9 171 chr2L 3044879 intron v(2)k05816 + chr2L 3044964 intron v(2)k05816 + chr2L 3045050 intron v(2)k05816 + chr2L_20_3040001 chr2L_3040001 Sg4 75 chr2L 3073009 3073054 chr2L 3078237 3078282 copia 14 5227 7.0 4.5 5.8 2.1 5273 chr2L 3073009 intron toc - chr2L 3075646 intron toc - chr2L 3078282 intron toc - chr2L_14_3075001 chr2L_3075001 Sg4 76 chr2L 3087356 3087407 chr2L 3087489 3087539 7 125 6.0 3.0 4.5 1.3 183 chr2L 3087356 intron toc - chr2L 3087448 intron toc - chr2L 3087539 intron toc - chr2L_7_3085001 chr2L_3085001 Sg4 77 chr2L 3134271 3134291 chr2L 3134372 3134392 4 101 3.0 9.5 6.2 0.6 121 chr2L 3134271 intron toc - chr2L 3134332 intron toc - chr2L 3134392 intron toc - chr2L_4_3130001 chr2L_3130001 Sg4 78 chr2L 3137158 3137204 chr2L 3137295 3137332 7 130 5.0 4.5 4.8 1.2 174 chr2L 3137158 intron toc - chr2L 3137245 intron toc - chr2L 3137332 intron toc - chr2L_7_3135001 chr2L_3135001 Sg4 79 chr2L 3147250 3147306 chr2L 3147352 3147408 15 102 7.0 4.0 5.5 2.3 158 chr2L 3147250 3` UTR Mad - chr2L 3147329 3` UTR Mad - chr2L 3147408 3` UTR Mad - chr2L_15_3145001 chr2L_3145001 Sg4 80 chr2L 3156506 3156564 chr2L 3156627 3156686 9 122 0.0 1.5 0.8 5.0 180 chr2L 3156506 intron Mad - chr2L 3156596 intron Mad - chr2L 3156686 intron Mad - chr2L_9_3155001 chr2L_3155001 Sg4 81 chr2L 3164304 3164362 chr2L 3169662 3169720 21 5357 4.5 1.0 2.8 5.5 5416 chr2L 3164304 intron Hydr2 + chr2L 3167012 exon Hydr2 + chr2L 3169720 intergenic CG44002 -,Hydr2 + chr2L_21_3165001 chr2L_3165001 Sg4 82 chr2L 3191418 3191459 chr2L 3191539 3191580 7 121 3.0 1.5 2.2 2.2 162 chr2L 3191418 intron CG34393 - chr2L 3191499 intron CG34393 - chr2L 3191580 intron CG34393 - chr2L_7_3190001 chr2L_3190001 Sg4 83 chr2L 3193810 3193857 chr2L 3193921 3193961 8 110 4.5 2.5 3.5 1.8 151 chr2L 3193810 intron CG34393 - chr2L 3193886 intron CG34393 - chr2L 3193961 intron CG34393 - chr2L_8_3190001 chr2L_3190001 Sg4 84 chr2L 3202721 3202761 chr2L 3210175 3210211 mdg1 17 7453 3.0 6.5 4.8 2.9 7490 chr2L 3202721 intergenic not near genes chr2L 3206466 intergenic not near genes chr2L 3210211 intergenic CR45336 + chr2L_17_3205001 chr2L_3205001 Sg4 85 chr2L 3221485 3221519 chr2L 3221725 3221759 8 240 2.5 4.5 3.5 1.8 274 chr2L 3221485 intergenic not near genes chr2L 3221622 intergenic not near genes chr2L 3221759 intergenic not near genes chr2L_8_3220001 chr2L_3220001 Sg4 86 chr2L 3251479 3251519 chr2L 3259059 3259109 springer 10 7588 4.0 4.0 4.0 2.0 7630 chr2L 3251479 intergenic not near genes chr2L 3255294 intergenic not near genes chr2L 3259109 intergenic not near genes chr2L_10_3255001 chr2L_3255001 Sg4 87 chr2L 3261356 3261509 chr2L 3261499 3261626 8 118 0.0 0.0 0.0 8.0 270 chr2L 3261356 intergenic CR45337 -,CR45338 - chr2L 3261491 intergenic CR45338 -,CR45337 - chr2L 3261626 intergenic CR45338 -,CR45337 - chr2L_8_3260001 chr2L_3260001 Sg4 88 chr2L 3291213 3291270 chr2L 3291318 3291375 8 105 1.5 6.0 3.8 1.7 162 chr2L 3291213 intergenic CG9664 - chr2L 3291294 3` UTR CG9664 - chr2L 3291375 3` UTR CG9664 - chr2L_8_3290001 chr2L_3290001 Sg4 89 chr2L 3322037 3322092 chr2L 3324823 3324850 5 2774 62.5 37.5 50.0 0.1 2813 chr2L 3322037 exon CG8837 + chr2L 3323444 intergenic CG8837 + chr2L 3324850 exon CG33281 + chr2L_5_3320001 chr2L_3320001 Sg4 90 chr2L 3388585 3388622 chr2L 3388848 3388887 pogo 5 265 1.0 3.5 2.2 1.6 302 chr2L 3388585 intergenic CG42460 - chr2L 3388736 intergenic CG42460 - chr2L 3388887 intergenic CG42460 -,CR44791 + chr2L_5_3385001 chr2L_3385001 Sg4 91 chr2L 3508352 3508375 chr2L 3508440 3508478 7 101 0.0 5.0 2.5 2.0 126 chr2L 3508352 intergenic tim -,CR45299 + chr2L 3508415 intergenic CR45299 +,tim - chr2L 3508478 intergenic CR45299 +,tim - chr2L_7_3505001 chr2L_3505001 Sg4 92 chr2L 3523018 3523054 chr2L 3523146 3523182 8 134 2.0 3.0 2.5 2.3 164 chr2L 3523018 exon Sr-CIV - chr2L 3523100 intron Sr-CIV - chr2L 3523182 exon Sr-CIV - chr2L_8_3520001 chr2L_3520001 Sg4 93 chr2L 3601061 3601104 chr2L 3601171 3601209 5 108 3.5 1.0 2.2 1.6 148 chr2L 3601061 intergenic not near genes chr2L 3601135 intergenic not near genes chr2L 3601209 intergenic not near genes chr2L_5_3600001 chr2L_3600001 Sg4 94 chr2L 3634083 3634130 chr2L 3634190 3634237 14 107 4.5 5.0 4.8 2.4 154 chr2L 3634083 intron for - chr2L 3634160 intron for - chr2L 3634237 intron for - chr2L_14_3630001 chr2L_3630001 Sg4 95 chr2L 3734639 3734685 chr2L 3734735 3734779 10 100 3.0 0.5 1.8 3.6 140 chr2L 3734639 intron CG10019 + chr2L 3734709 intron CG10019 + chr2L 3734779 intron CG10019 + chr2L_10_3730001 chr2L_3730001 Sg4 96 chr2L 3819601 3819624 chr2L 3819702 3819724 6 101 0.0 4.5 2.2 1.9 123 chr2L 3819601 intergenic not near genes chr2L 3819662 intergenic not near genes chr2L 3819724 intergenic not near genes chr2L_6_3815001 chr2L_3815001 Sg4 97 chr2L 3831813 3831862 chr2L 3831919 3831968 13 106 2.5 3.0 2.8 3.4 155 chr2L 3831813 intergenic not near genes chr2L 3831890 intergenic not near genes chr2L 3831968 intergenic not near genes chr2L_13_3830001 chr2L_3830001 Sg4 98 chr2L 3862404 3862522 chr2L 3862512 3862634 4 108 0.0 0.0 0.0 4.0 230 chr2L 3862404 intergenic CG3964 +,CR44078 - chr2L 3862519 intergenic CG3964 +,CR44078 - chr2L 3862634 intergenic CG3964 + chr2L_4_3860001 chr2L_3860001 Sg4 99 chr2L 3891868 3891913 chr2L 3891978 3892018 9 109 1.5 3.0 2.2 2.8 150 chr2L 3891868 intron capu - chr2L 3891943 intron capu - chr2L 3892018 intron capu - chr2L_9_3890001 chr2L_3890001 Sg4 100 chr2L 3933913 3933951 chr2L 3934238 3934288 10 333 3.0 6.0 4.5 1.8 375 chr2L 3933913 intron fred - chr2L 3934100 intron fred - chr2L 3934288 intron fred - chr2L_10_3930001 chr2L_3930001 Sg4 101 chr2L 3947398 3947442 chr2L 3947627 3947671 7 229 2.5 1.0 1.8 2.5 273 chr2L 3947398 intron fred - chr2L 3947534 intron fred - chr2L 3947671 intron fred - chr2L_7_3945001 chr2L_3945001 Sg4 102 chr2L 3950060 3950104 chr2L 3950161 3950205 10 101 1.0 1.0 1.0 5.0 145 chr2L 3950060 intron fred - chr2L 3950132 intron fred - chr2L 3950205 intron fred - chr2L_10_3950001 chr2L_3950001 Sg4 103 chr2L 4037783 4037807 chr2L 4037895 4037919 7 112 2.0 4.0 3.0 1.8 136 chr2L 4037783 intron ed + chr2L 4037851 intron ed + chr2L 4037919 intron ed + chr2L_7_4035001 chr2L_4035001 Sg4 104 chr2L 4112170 4112210 chr2L 4112537 4112577 4 364 5.5 3.5 4.5 0.7 407 chr2L 4112170 intron ed + chr2L 4112374 intron ed + chr2L 4112577 intron ed + chr2L_4_4110001 chr2L_4110001 Sg4 105 chr2L 4136360 4136413 chr2L 4136472 4136525 14 110 1.0 4.0 2.5 4.0 165 chr2L 4136360 intergenic not near genes chr2L 4136442 intergenic not near genes chr2L 4136525 intergenic not near genes chr2L_14_4135001 chr2L_4135001 Sg4 106 chr2L 4150623 4150650 chr2L 4150728 4150755 9 105 1.5 5.5 3.5 2.0 132 chr2L 4150623 exon CG2955 + chr2L 4150689 exon CG2955 + chr2L 4150755 exon CG2955 + chr2L_9_4150001 chr2L_4150001 Sg4 107 chr2L 4166360 4166404 chr2L 4166468 4166512 10 108 3.0 6.5 4.8 1.7 152 chr2L 4166360 intergenic Or24a - chr2L 4166436 intergenic Or24a - chr2L 4166512 intergenic Or24a - chr2L_10_4165001 chr2L_4165001 Sg4 108 chr2L 4181301 4181303 chr2L 4183958 4183960 Burdock 4 2657 4.5 18.0 11.2 0.3 2659 chr2L 4181301 intergenic not near genes chr2L 4182630 intergenic not near genes chr2L 4183960 intergenic not near genes chr2L_4_4180001 chr2L_4180001 Sg4 109 chr2L 4184449 4184501 chr2L 4184793 4184845 6 344 2.5 3.5 3.0 1.5 396 chr2L 4184449 intergenic not near genes chr2L 4184647 intergenic not near genes chr2L 4184845 intergenic not near genes chr2L_6_4180001 chr2L_4180001 Sg4 110 chr2L 4661824 4661853 chr2L 4669429 4669458 opus 9 7605 5.5 5.0 5.2 1.5 7634 chr2L 4661824 intergenic not near genes chr2L 4665641 intergenic not near genes chr2L 4669458 intergenic not near genes chr2L_9_4665001 chr2L_4665001 Sg4 111 chr2L 4808956 4808992 chr2L 4811689 4811724 4 2732 3.0 8.0 5.5 0.6 2768 chr2L 4808956 intergenic not near genes chr2L 4810340 intergenic not near genes chr2L 4811724 3` UTR CR45297 - chr2L_4_4810001 chr2L_4810001 Sg4 112 chr2L 4858454 4858474 chr2L 4858567 4858587 4 113 2.5 4.0 3.2 1.0 133 chr2L 4858454 intron pog + chr2L 4858520 intron pog + chr2L 4858587 intron pog + chr2L_4_4855001 chr2L_4855001 Sg4 113 chr2L 4889411 4889446 chr2L 4889521 4889556 7 110 3.5 8.5 6.0 1.0 145 chr2L 4889411 intergenic not near genes chr2L 4889484 intergenic not near genes chr2L 4889556 intergenic CG15625 + chr2L_7_4885001 chr2L_4885001 Sg4 114 chr2L 5902610 5902615 chr2L 5902707 5902717 5 101 22.0 20.5 21.2 0.2 107 chr2L 5902610 intergenic not near genes chr2L 5902664 intergenic not near genes chr2L 5902717 intergenic CG9021 - chr2L_5_5900001 chr2L_5900001 Sg4 115 chr2L 5902617 5902632 chr2L 5902714 5902734 11 101 19.5 24.5 22.0 0.5 117 chr2L 5902617 intergenic not near genes chr2L 5902676 intergenic not near genes chr2L 5902734 intergenic CG9021 - chr2L_11_5900001 chr2L_5900001 Sg4 116 chr2L 5902119 5902147 chr2L 5910946 5910974 10 8827 22.5 27.5 25.0 0.4 8855 chr2L 5902119 intergenic not near genes chr2L 5906546 intergenic CR43808 - chr2L 5910974 exon bchs + chr2L_10_5905001 chr2L_5905001 Sg4 117 chr2L 5922695 5922913 chr2L 5922818 5923016 5 115 4.5 4.5 4.5 0.9 321 chr2L 5922695 3` UTR bchs + chr2L 5922856 intergenic CG9016 -,bchs + chr2L 5923016 3` UTR CG9016 - chr2L_5_5920001 chr2L_5920001 Sg4 118 chr2L 5926581 5926623 chr2L 5926685 5926727 7 104 4.0 0.0 2.0 2.3 146 chr2L 5926581 intron dsf + chr2L 5926654 intron dsf + chr2L 5926727 intron dsf + chr2L_7_5925001 chr2L_5925001 Sg4 119 chr2L 5931293 5931328 chr2L 5931430 5931465 11 137 3.0 5.0 4.0 2.2 172 chr2L 5931293 intron dsf + chr2L 5931379 intron dsf + chr2L 5931465 intron dsf + chr2L_11_5930001 chr2L_5930001 Sg4 120 chr2L 5944551 5944586 chr2L 5948968 5949003 8 4419 46.0 17.5 31.8 0.2 4452 chr2L 5944551 intron Gpdh + chr2L 5946777 intron Gpdh + chr2L 5949003 intergenic Gpdh +,CG9044 + chr2L_8_5945001 chr2L_5945001 Sg4 121 chr2L 5989019 5989047 chr2L 5989114 5989148 9 100 7.0 0.0 3.5 2.0 129 chr2L 5989019 intergenic ifc +,lid - chr2L 5989084 intergenic ifc +,lid - chr2L 5989148 intergenic lid -,ifc + chr2L_9_5985001 chr2L_5985001 Sg4 122 chr2L 6025380 6025427 chr2L 6025481 6025528 10 101 3.5 6.0 4.8 1.7 148 chr2L 6025380 intergenic CG9109 - chr2L 6025454 intergenic CG9109 - chr2L 6025528 intergenic CG9109 - chr2L_10_6025001 chr2L_6025001 Sg4 123 chr2L 6050417 6050458 chr2L 6050546 6050587 10 129 7.0 2.5 4.8 1.7 170 chr2L 6050417 3` UTR CG12393 + chr2L 6050502 intergenic CG12393 +,CG9135 + chr2L 6050587 intergenic CG12393 +,CG9135 + chr2L_10_6050001 chr2L_6050001 Sg4 124 chr2L 6185438 6185443 chr2L 6185541 6185546 4 103 5.0 6.5 5.8 0.6 108 chr2L 6185438 intron CG34380 + chr2L 6185492 intron CG34380 + chr2L 6185546 intron CG34380 + chr2L_4_6185001 chr2L_6185001 Sg4 125 chr2L 6185449 6185466 chr2L 6185522 6185569 12 92 4.0 4.5 4.2 2.3 120 chr2L 6185449 intron CG34380 + chr2L 6185509 intron CG34380 + chr2L 6185569 intron CG34380 + chr2L_12_6185001 chr2L_6185001 Sg4 126 chr2L 6242952 6242975 chr2L 6243075 6243098 11 123 5.0 0.5 2.8 2.9 146 chr2L 6242952 intergenic not near genes chr2L 6243025 intergenic not near genes chr2L 6243098 intergenic not near genes chr2L_11_6240001 chr2L_6240001 Sg4 127 chr2L 6279620 6279653 chr2L 6279724 6279757 INE-1 11 104 4.0 0.0 2.0 3.7 137 chr2L 6279620 intron Ddr + chr2L 6279688 intron Ddr + chr2L 6279757 intron Ddr + chr2L_11_6275001 chr2L_6275001 Sg4 128 chr2L 6283925 6283975 chr2L 6284061 6284111 10 136 1.5 0.5 1.0 5.0 186 chr2L 6283925 intron Ddr + chr2L 6284018 intron Ddr + chr2L 6284111 intron Ddr + chr2L_10_6280001 chr2L_6280001 Sg4 129 chr2L 6285873 6285923 chr2L 6286064 6286114 8 188 3.0 5.0 4.0 1.6 241 chr2L 6285873 intron Ddr + chr2L 6285994 intron Ddr + chr2L 6286114 intron Ddr + chr2L_8_6285001 chr2L_6285001 Sg4 130 chr2L 6308286 6308337 chr2L 6308394 6308445 15 107 2.0 3.5 2.8 3.9 159 chr2L 6308286 intron Ddr + chr2L 6308366 intron Ddr + chr2L 6308445 intron,3` UTR Ddr +,CG43922 - chr2L_15_6305001 chr2L_6305001 Sg4 131 chr2L 6318709 6318764 chr2L 6318888 6318943 10 179 3.0 2.5 2.8 2.6 234 chr2L 6318709 intron Ddr + chr2L 6318826 intron Ddr + chr2L 6318943 intron Ddr + chr2L_10_6315001 chr2L_6315001 Sg4 132 chr2L 6349054 6349067 chr2L 6349157 6349170 4 103 5.0 2.0 3.5 0.9 116 chr2L 6349054 intergenic CG9498 - chr2L 6349112 intergenic CG9498 - chr2L 6349170 intergenic CG9498 - chr2L_4_6345001 chr2L_6345001 Sg4 133 chr2L 6363125 6363174 chr2L 6366076 6366125 Burdock 20 2951 2.5 4.5 3.5 4.4 3000 chr2L 6363125 intergenic not near genes chr2L 6364625 intergenic not near genes chr2L 6366125 intergenic not near genes chr2L_20_6360001 chr2L_6360001 Sg4 134 chr2L 6426834 6426882 chr2L 6445119 6445131 roo 17 18283 4.5 7.5 6.0 2.4 18297 chr2L 6426834 3` UTR CG9527 - chr2L 6435982 intron CG9527 - chr2L 6445131 exon CG9527 - chr2L_17_6435001 chr2L_6435001 Sg4 135 chr2L 6564832 6564881 chr2L 6564950 6564998 9 118 1.0 4.0 2.5 2.6 166 chr2L 6564832 3` UTR CG13766 - chr2L 6564915 3` UTR CG13766 - chr2L 6564998 3` UTR CG13766 - chr2L_9_6560001 chr2L_6560001 Sg4 136 chr2L 6626864 6626915 chr2L 6626974 6627025 15 109 2.5 5.0 3.8 3.1 161 chr2L 6626864 intron Oatp26F - chr2L 6626944 intron Oatp26F - chr2L 6627025 intron Oatp26F - chr2L_15_6625001 chr2L_6625001 Sg4 137 chr2L 6640882 6640935 chr2L 6641002 6641055 18 120 3.0 6.5 4.8 3.1 173 chr2L 6640882 exon CG31635 - chr2L 6640968 intron CG31635 - chr2L 6641055 intron CG31635 - chr2L_18_6640001 chr2L_6640001 Sg4 138 chr2L 6655500 6655547 chr2L 6655887 6655931 19 384 8.0 4.0 6.0 2.7 431 chr2L 6655500 exon CG31633 - chr2L 6655716 exon CG31633 - chr2L 6655931 exon CG31633 - chr2L_19_6655001 chr2L_6655001 Sg4 139 chr2L 6771576 6771593 chr2L 6771698 6771715 4 122 2.5 0.0 1.2 1.8 139 chr2L 6771576 intron CG11321 - chr2L 6771646 intron CG11321 - chr2L 6771715 intron CG11321 - chr2L_4_6770001 chr2L_6770001 Sg4 140 chr2L 6772571 6772596 chr2L 6772677 6772702 4 102 5.0 12.5 8.8 0.4 131 chr2L 6772571 5` UTR CG11321 - chr2L 6772636 5` UTR CG11321 - chr2L 6772702 5` UTR CG11321 - chr2L_4_6770001 chr2L_6770001 Sg4 141 chr2L 6823274 6823311 chr2L 6873395 6873432 9 50121 14.5 20.5 17.5 0.5 50158 chr2L 6823274 intron sens-2 + chr2L 6848353 intergenic not near genes chr2L 6873432 5` UTR CR44914 + chr2L_9_6845001 chr2L_6845001 Sg4 142 chr2L 6950133 6950191 chr2L 6950363 6950421 16 227 3.0 6.5 4.8 2.8 288 chr2L 6950133 5` UTR Gas41 - chr2L 6950277 intergenic Gas41 -,SA + chr2L 6950421 5` UTR SA + chr2L_16_6950001 chr2L_6950001 Sg4 143 chr2L 7043491 7043530 chr2L 7043603 7043642 9 112 3.5 1.0 2.2 2.8 151 chr2L 7043491 intron milt + chr2L 7043566 intron milt + chr2L 7043642 intron milt + chr2L_9_7040001 chr2L_7040001 Sg4 144 chr2L 7051147 7051163 chr2L 7051248 7051257 5 99 0.0 0.0 0.0 5.0 110 chr2L 7051147 intron milt + chr2L 7051202 intron milt + chr2L 7051257 intron milt + chr2L_5_7050001 chr2L_7050001 Sg4 145 chr2L 7125766 7125802 chr2L 7125907 7125943 4 141 3.0 2.0 2.5 1.1 177 chr2L 7125766 intron Pvf3 - chr2L 7125854 intron Pvf3 - chr2L 7125943 intron Pvf3 - chr2L_4_7125001 chr2L_7125001 Sg4 146 chr2L 7126835 7126874 chr2L 7126939 7126978 6 104 2.5 0.0 1.2 2.7 143 chr2L 7126835 intron Pvf3 - chr2L 7126906 intron Pvf3 - chr2L 7126978 intron Pvf3 - chr2L_6_7125001 chr2L_7125001 Sg4 147 chr2L 7156247 7156255 chr2L 7156349 7156356 4 102 22.5 9.5 16.0 0.2 109 chr2L 7156247 exon Pvf3 - chr2L 7156302 exon Pvf3 - chr2L 7156356 exon Pvf3 - chr2L_4_7155001 chr2L_7155001 Sg4 148 chr2L 7156256 7156268 chr2L 7156348 7156364 7 99 19.5 9.5 14.5 0.5 108 chr2L 7156256 exon Pvf3 - chr2L 7156310 exon Pvf3 - chr2L 7156364 exon Pvf3 - chr2L_7_7155001 chr2L_7155001 Sg4 149 chr2L 7156269 7156271 chr2L 7156346 7156373 4 95 16.5 9.0 12.8 0.3 104 chr2L 7156269 exon Pvf3 - chr2L 7156321 exon Pvf3 - chr2L 7156373 exon Pvf3 - chr2L_4_7155001 chr2L_7155001 Sg4 150 chr2L 7156272 7156297 chr2L 7156344 7156399 20 94 10.0 9.5 9.8 1.9 127 chr2L 7156272 exon Pvf3 - chr2L 7156336 exon Pvf3 - chr2L 7156399 exon Pvf3 - chr2L_20_7155001 chr2L_7155001 Sg4 151 chr2L 7160170 7160225 chr2L 7160284 7160329 20 112 3.5 4.5 4.0 4.0 159 chr2L 7160170 intergenic not near genes chr2L 7160250 intergenic not near genes chr2L 7160329 intergenic not near genes chr2L_20_7160001 chr2L_7160001 Sg4 152 chr2L 7254520 7254544 chr2L 7254623 7254647 6 103 0.0 2.5 1.2 2.7 127 chr2L 7254520 intergenic not near genes chr2L 7254584 intergenic not near genes chr2L 7254647 intergenic not near genes chr2L_6_7250001 chr2L_7250001 Sg4 153 chr2L 7270591 7270622 chr2L 7270692 7270723 9 100 4.5 6.5 5.5 1.4 132 chr2L 7270591 intron Wnt4 - chr2L 7270657 intron Wnt4 - chr2L 7270723 intron Wnt4 - chr2L_9_7270001 chr2L_7270001 Sg4 154 chr2L 7295972 7296023 chr2L 7296135 7296188 11 164 2.0 1.5 1.8 3.9 216 chr2L 7295972 intergenic not near genes chr2L 7296080 intergenic not near genes chr2L 7296188 intergenic not near genes chr2L_11_7295001 chr2L_7295001 Sg4 155 chr2L 7325890 7325939 chr2L 7326000 7326049 8 110 6.0 2.5 4.2 1.5 159 chr2L 7325890 intergenic not near genes chr2L 7325970 intergenic not near genes chr2L 7326049 intergenic not near genes chr2L_8_7325001 chr2L_7325001 Sg4 156 chr2L 7343302 7343352 chr2L 7350443 7350493 roo 20 7141 5.0 7.5 6.2 2.8 7191 chr2L 7343302 intron Wnt6 + chr2L 7346898 intron Wnt6 + chr2L 7350493 intron Wnt6 + chr2L_20_7345001 chr2L_7345001 Sg4 157 chr2L 7422808 7422841 chr2L 7423320 7423349 5 509 9.5 12.5 11.0 0.4 541 chr2L 7422808 intergenic chm + chr2L 7423078 intergenic chm + chr2L 7423349 intergenic CR43857 + chr2L_5_7420001 chr2L_7420001 Sg4 158 chr2L 7436186 7436212 chr2L 7436298 7436325 5 111 3.5 3.5 3.5 1.1 139 chr2L 7436186 intergenic not near genes chr2L 7436256 intergenic not near genes chr2L 7436325 intergenic not near genes chr2L_5_7435001 chr2L_7435001 Sg4 159 chr2L 7493411 7493420 chr2L 7493517 7493531 4 110 0.0 6.5 3.2 1.0 120 chr2L 7493411 intron Ziz - chr2L 7493471 intron Ziz - chr2L 7493531 intron Ziz - chr2L_4_7490001 chr2L_7490001 Sg4 160 chr2L 7502711 7502762 chr2L 7502812 7502853 20 98 4.0 3.0 3.5 4.4 142 chr2L 7502711 intron RapGAP1 - chr2L 7502782 intron RapGAP1 - chr2L 7502853 intron RapGAP1 - chr2L_20_7500001 chr2L_7500001 Sg4 161 chr2L 7555192 7555229 chr2L 7555294 7555309 6 96 0.0 1.0 0.5 4.0 117 chr2L 7555192 intron RapGAP1 - chr2L 7555250 intron RapGAP1 - chr2L 7555309 intron RapGAP1 - chr2L_6_7555001 chr2L_7555001 Sg4 162 chr2L 7640402 7640412 chr2L 7640516 7640526 4 114 4.0 4.5 4.2 0.8 124 chr2L 7640402 intergenic not near genes chr2L 7640464 intergenic not near genes chr2L 7640526 intergenic not near genes chr2L_4_7640001 chr2L_7640001 Sg4 163 chr2L 7650477 7650512 chr2L 7650589 7650626 6 114 3.5 5.5 4.5 1.1 149 chr2L 7650477 intron Slob - chr2L 7650552 intron Slob - chr2L 7650626 intron Slob - chr2L_6_7650001 chr2L_7650001 Sg4 164 chr2L 7766606 7766645 chr2L 7766706 7766746 8 100 3.0 2.0 2.5 2.3 140 chr2L 7766606 intergenic not near genes chr2L 7766676 intergenic not near genes chr2L 7766746 intergenic not near genes chr2L_8_7765001 chr2L_7765001 Sg4 165 chr2L 7867547 7867594 chr2L 7867666 7867713 4 118 3.5 4.0 3.8 0.8 166 chr2L 7867547 intron Proc - chr2L 7867630 intron Proc - chr2L 7867713 intron Proc - chr2L_4_7865001 chr2L_7865001 Sg4 166 chr2L 7922724 7922760 chr2L 7922830 7922860 12 106 7.5 3.5 5.5 1.8 136 chr2L 7922724 intron Snoo - chr2L 7922792 intron Snoo - chr2L 7922860 intron Snoo - chr2L_12_7920001 chr2L_7920001 Sg4 167 chr2L 7941181 7941195 chr2L 7941285 7941299 4 103 3.5 12.5 8.0 0.4 118 chr2L 7941181 intron Snoo - chr2L 7941240 intron Snoo - chr2L 7941299 intron Snoo - chr2L_4_7940001 chr2L_7940001 Sg4 168 chr2L 7959019 7959072 chr2L 7960455 7960510 pogo 9 1436 4.5 2.5 3.5 2.0 1491 chr2L 7959019 intron Snoo - chr2L 7959764 intron Snoo - chr2L 7960510 intron Snoo - chr2L_9_7955001 chr2L_7955001 Sg4 169 chr2L 7977079 7977112 chr2L 7984080 7984113 297 11 7000 6.0 6.0 6.0 1.6 7034 chr2L 7977079 intron Snoo - chr2L 7980596 intron Snoo - chr2L 7984113 intron,5` UTR Snoo -,CG7231 + chr2L_11_7980001 chr2L_7980001 Sg4 170 chr2L 7997015 7997065 chr2L 7997140 7997190 7 125 1.0 2.0 1.5 2.8 175 chr2L 7997015 intron CG7227 - chr2L 7997102 intron CG7227 - chr2L 7997190 intron CG7227 - chr2L_7_7995001 chr2L_7995001 Sg4 171 chr2L 8003048 8003054 chr2L 8003155 8003161 4 107 0.0 6.5 3.2 1.0 113 chr2L 8003048 intron Wwox - chr2L 8003104 intron Wwox - chr2L 8003161 intron Wwox - chr2L_4_8000001 chr2L_8000001 Sg4 172 chr2L 8013597 8013606 chr2L 8018826 8018835 copia 7 5229 8.0 0.0 4.0 1.4 5238 chr2L 8013597 intron Tg + chr2L 8016216 intron Tg + chr2L 8018835 intron Tg + chr2L_7_8015001 chr2L_8015001 Sg4 173 chr2L 8044071 8044118 chr2L 8044175 8044222 15 101 8.0 5.0 6.5 2.0 151 chr2L 8044071 exon CG7466 + chr2L 8044146 intron CG7466 + chr2L 8044222 intron CG7466 + chr2L_15_8040001 chr2L_8040001 Sg4 174 chr2L 8105006 8105035 chr2L 8105352 8105381 6 346 2.0 2.0 2.0 2.0 375 chr2L 8105006 intron Bsg + chr2L 8105194 intron Bsg + chr2L 8105381 intron Bsg + chr2L_6_8105001 chr2L_8105001 Sg4 175 chr2L 8164561 8164611 chr2L 8164668 8164718 7 107 1.5 6.0 3.8 1.5 157 chr2L 8164561 intron Piezo + chr2L 8164640 intron Piezo + chr2L 8164718 intron Piezo + chr2L_7_8160001 chr2L_8160001 Sg4 176 chr2L 8288656 8288699 chr2L 8288771 8288820 6 119 3.0 2.0 2.5 1.7 164 chr2L 8288656 intron Btk29A - chr2L 8288738 intron Btk29A - chr2L 8288820 intron Btk29A - chr2L_6_8285001 chr2L_8285001 Sg4 177 chr2L 8336931 8336967 chr2L 8337035 8337071 7 101 0.0 6.0 3.0 1.8 140 chr2L 8336931 intergenic not near genes chr2L 8337001 intergenic not near genes chr2L 8337071 intergenic not near genes chr2L_7_8335001 chr2L_8335001 Sg4 178 chr2L 8349583 8349630 chr2L 8349713 8349750 20 129 5.0 5.5 5.2 3.2 167 chr2L 8349583 exon CG7778 + chr2L 8349666 intron CG7778 + chr2L 8349750 exon CG7778 + chr2L_20_8345001 chr2L_8345001 Sg4 179 chr2L 8351539 8351587 chr2L 8351641 8351689 8 102 0.0 4.5 2.2 2.5 150 chr2L 8351539 intergenic CG7778 + chr2L 8351614 intergenic not near genes chr2L 8351689 intergenic Mur29B + chr2L_8_8350001 chr2L_8350001 Sg4 180 chr2L 8452398 8452447 chr2L 8461594 8461632 roo 14 9195 2.5 7.0 4.8 2.4 9234 chr2L 8452398 intron fu12 - chr2L 8457015 intron fu12 - chr2L 8461632 intron fu12 - chr2L_14_8455001 chr2L_8455001 Sg4 181 chr2L 8588479 8588520 chr2L 8588842 8588883 12 362 4.0 2.0 3.0 3.0 404 chr2L 8588479 intron Sema-1a + chr2L 8588681 intron Sema-1a + chr2L 8588883 intron Sema-1a + chr2L_12_8585001 chr2L_8585001 Sg4 182 chr2L 8594442 8594477 chr2L 8601521 8601556 297 8 7079 3.5 2.5 3.0 2.0 7114 chr2L 8594442 intron,3` UTR Sema-1a +,CR43855 - chr2L 8597999 intron Sema-1a + chr2L 8601556 intron Sema-1a + chr2L_8_8595001 chr2L_8595001 Sg4 183 chr2L 8604952 8604999 chr2L 8605070 8605122 14 122 3.0 5.0 4.0 2.8 170 chr2L 8604952 intron Sema-1a + chr2L 8605037 intron Sema-1a + chr2L 8605122 intron Sema-1a + chr2L_14_8605001 chr2L_8605001 Sg4 184 chr2L 8689681 8689734 chr2L 8689797 8689855 25 121 3.0 7.0 5.0 4.2 174 chr2L 8689681 intron Hnf4 - chr2L 8689768 intron Hnf4 - chr2L 8689855 exon Hnf4 - chr2L_25_8685001 chr2L_8685001 Sg4 185 chr2L 8698300 8698351 chr2L 8698464 8698514 10 164 5.0 0.0 2.5 2.9 214 chr2L 8698300 intron Hnf4 - chr2L 8698407 intron Hnf4 - chr2L 8698514 intron Hnf4 - chr2L_10_8695001 chr2L_8695001 Sg4 186 chr2L 8717067 8717099 chr2L 8719754 8719786 6 2687 0.0 5.5 2.8 1.6 2719 chr2L 8717067 intron raw - chr2L 8718426 intron raw - chr2L 8719786 intron raw - chr2L_6_8715001 chr2L_8715001 Sg4 187 chr2L 8723093 8723135 chr2L 8731495 8731537 Tirant 9 8402 4.0 7.5 5.8 1.3 8444 chr2L 8723093 intron raw - chr2L 8727315 intron raw - chr2L 8731537 intron raw - chr2L_9_8725001 chr2L_8725001 Sg4 188 chr2L 8784679 8784718 chr2L 8784815 8784854 8 136 0.5 1.0 0.8 4.4 175 chr2L 8784679 intergenic not near genes chr2L 8784766 intergenic not near genes chr2L 8784854 intergenic not near genes chr2L_8_8780001 chr2L_8780001 Sg4 189 chr2L 8786529 8786571 chr2L 8786641 8786683 7 110 1.0 6.5 3.8 1.5 154 chr2L 8786529 intergenic not near genes chr2L 8786606 intergenic not near genes chr2L 8786683 intergenic not near genes chr2L_7_8785001 chr2L_8785001 Sg4 190 chr2L 8788728 8788781 chr2L 8788844 8788897 4 116 1.0 0.5 0.8 2.2 169 chr2L 8788728 intergenic not near genes chr2L 8788812 intergenic not near genes chr2L 8788897 intergenic not near genes chr2L_4_8785001 chr2L_8785001 Sg4 191 chr2L 8799780 8799832 chr2L 8799915 8799943 9 130 2.5 3.0 2.8 2.4 163 chr2L 8799780 intergenic not near genes chr2L 8799862 intergenic not near genes chr2L 8799943 intergenic not near genes chr2L_9_8795001 chr2L_8795001 Sg4 192 chr2L 8811815 8811866 chr2L 8811920 8811969 9 103 5.0 1.5 3.2 2.1 154 chr2L 8811815 intergenic not near genes chr2L 8811892 intergenic not near genes chr2L 8811969 intergenic not near genes chr2L_9_8810001 chr2L_8810001 Sg4 193 chr2L 8813841 8813856 chr2L 8813943 8813958 6 102 4.0 12.0 8.0 0.7 117 chr2L 8813841 intergenic not near genes chr2L 8813900 intergenic not near genes chr2L 8813958 intergenic not near genes chr2L_6_8810001 chr2L_8810001 Sg4 194 chr2L 8910698 8910747 chr2L 8910814 8910863 11 116 2.5 2.0 2.2 3.4 165 chr2L 8910698 intron CG34398 + chr2L 8910780 intron CG34398 + chr2L 8910863 intron CG34398 + chr2L_11_8910001 chr2L_8910001 Sg4 195 chr2L 8946227 8946270 chr2L 8947672 8947715 4 1445 14.0 19.5 16.8 0.2 1488 chr2L 8946227 intron C1GalTA - chr2L 8946971 intron C1GalTA - chr2L 8947715 intron C1GalTA - chr2L_4_8945001 chr2L_8945001 Sg4 196 chr2L 8956201 8956231 chr2L 8956303 8956333 12 102 4.0 0.0 2.0 4.0 132 chr2L 8956201 intron CG31886 - chr2L 8956267 intron CG31886 - chr2L 8956333 intron CG31886 - chr2L_12_8955001 chr2L_8955001 Sg4 197 chr2L 9000259 9000302 chr2L 9007794 9007837 roo 14 7535 3.5 1.0 2.2 4.4 7578 chr2L 9000259 intergenic Try29F + chr2L 9004048 intergenic not near genes chr2L 9007837 intergenic not near genes chr2L_14_9000001 chr2L_9000001 Sg4 198 chr2L 9084339 9084340 chr2L 16217660 16217661 13 7133321 10.5 20.0 15.2 0.8 7133322 chr2L 9084339 intron Toll-4 + chr2L 12651000 intergenic not near genes chr2L 16217661 intergenic not near genes chr2L_13_12650001 chr2L_12650001 Sg4 199 chr2L 9150692 9150727 chr2L 9150890 9150925 5 198 0.5 3.5 2.0 1.7 233 chr2L 9150692 intron CG32982 + chr2L 9150808 intron CG32982 + chr2L 9150925 intron CG32982 + chr2L_5_9150001 chr2L_9150001 Sg4 200 chr2L 9151133 9151182 chr2L 9151234 9151283 14 101 2.0 2.0 2.0 4.7 150 chr2L 9151133 intron CG32982 + chr2L 9151208 intron CG32982 + chr2L 9151283 intron CG32982 + chr2L_14_9150001 chr2L_9150001 Sg4 201 chr2L 9156656 9156708 chr2L 9156759 9156811 13 103 3.5 3.0 3.2 3.1 155 chr2L 9156656 intron CG32982 + chr2L 9156734 intron CG32982 + chr2L 9156811 intron CG32982 + chr2L_13_9155001 chr2L_9155001 Sg4 202 chr2L 9195854 9195881 chr2L 9195956 9195989 8 107 3.5 5.5 4.5 1.5 135 chr2L 9195854 intron tai + chr2L 9195922 intron tai + chr2L 9195989 intron tai + chr2L_8_9195001 chr2L_9195001 Sg4 203 chr2L 9225403 9225425 chr2L 9225491 9225525 7 101 1.5 5.0 3.2 1.7 122 chr2L 9225403 intron tai + chr2L 9225464 intron tai + chr2L 9225525 intron tai + chr2L_7_9225001 chr2L_9225001 Sg4 204 chr2L 9251121 9251175 chr2L 9251243 9251297 14 120 0.5 6.0 3.2 3.3 176 chr2L 9251121 intergenic aust -,borr - chr2L 9251209 intergenic aust -,borr - chr2L 9251297 intergenic borr -,aust - chr2L_14_9250001 chr2L_9250001 Sg4 205 chr2L 9256215 9256269 chr2L 9256439 9256493 12 223 10.0 9.0 9.5 1.1 278 chr2L 9256215 intergenic Ggamma30A + chr2L 9256354 intergenic Ggamma30A + chr2L 9256493 intergenic Ggamma30A + chr2L_12_9255001 chr2L_9255001 Sg4 206 chr2L 9259200 9259247 chr2L 9259307 9259360 15 114 1.5 3.0 2.2 4.7 160 chr2L 9259200 intron Ggamma30A + chr2L 9259280 intron Ggamma30A + chr2L 9259360 intron Ggamma30A + chr2L_15_9255001 chr2L_9255001 Sg4 207 chr2L 9287298 9287351 chr2L 9287420 9287468 13 122 4.0 4.0 4.0 2.6 170 chr2L 9287298 intron Ggamma30A + chr2L 9287383 intron Ggamma30A + chr2L 9287468 intron Ggamma30A + chr2L_13_9285001 chr2L_9285001 Sg4 208 chr2L 9297361 9297393 chr2L 9297462 9297495 10 101 5.5 5.0 5.2 1.6 134 chr2L 9297361 3` UTR Ggamma30A + chr2L 9297428 3` UTR Ggamma30A + chr2L 9297495 3` UTR Ggamma30A + chr2L_10_9295001 chr2L_9295001 Sg4 209 chr2L 9357232 9357271 chr2L 9357338 9357377 7 106 2.0 1.5 1.8 2.5 145 chr2L 9357232 intergenic not near genes chr2L 9357304 intergenic not near genes chr2L 9357377 intergenic not near genes chr2L_7_9355001 chr2L_9355001 Sg4 210 chr2L 9364281 9364328 chr2L 9364403 9364445 6 120 0.0 3.5 1.8 2.1 164 chr2L 9364281 intergenic CR43404 + chr2L 9364363 intron CR43404 + chr2L 9364445 intron CR43404 + chr2L_6_9360001 chr2L_9360001 Sg4 211 chr2L 9380218 9380253 chr2L 9380338 9380373 8 120 5.0 5.0 5.0 1.3 155 chr2L 9380218 exon Shawl - chr2L 9380296 intron Shawl - chr2L 9380373 intron Shawl - chr2L_8_9380001 chr2L_9380001 Sg4 212 chr2L 9393473 9393524 chr2L 9396465 9396516 jockey 9 2991 2.0 1.5 1.8 3.2 3043 chr2L 9393473 intron Shawl - chr2L 9394994 intron Shawl - chr2L 9396516 intron Shawl - chr2L_9_9390001 chr2L_9390001 Sg4 213 chr2L 9401848 9401853 chr2L 9401916 9401962 4 94 0.5 6.5 3.5 0.9 114 chr2L 9401848 intron Shawl - chr2L 9401905 intron Shawl - chr2L 9401962 intron Shawl - chr2L_4_9400001 chr2L_9400001 Sg4 214 chr2L 9407892 9407906 chr2L 9407999 9408013 6 107 3.0 3.0 3.0 1.5 121 chr2L 9407892 intron Shawl - chr2L 9407952 intron Shawl - chr2L 9408013 intron Shawl - chr2L_6_9405001 chr2L_9405001 Sg4 215 chr2L 9412121 9412164 chr2L 9412246 9412289 7 125 5.0 7.5 6.2 1.0 168 chr2L 9412121 intron Shawl - chr2L 9412205 intron Shawl - chr2L 9412289 intron Shawl - chr2L_7_9410001 chr2L_9410001 Sg4 216 chr2L 9438568 9438600 chr2L 9438703 9438735 14 135 7.5 3.5 5.5 2.2 167 chr2L 9438568 intron numb + chr2L 9438652 intron numb + chr2L 9438735 intron numb + chr2L_14_9435001 chr2L_9435001 Sg4 217 chr2L 9454951 9455007 chr2L 9455078 9455136 11 127 4.5 1.5 3.0 2.8 185 chr2L 9454951 intron numb + chr2L 9455044 intron numb + chr2L 9455136 intron numb + chr2L_11_9455001 chr2L_9455001 Sg4 218 chr2L 9457054 9457104 chr2L 9457156 9457206 15 101 5.5 5.5 5.5 2.3 152 chr2L 9457054 intron numb + chr2L 9457130 intron numb + chr2L 9457206 intron numb + chr2L_15_9455001 chr2L_9455001 Sg4 219 chr2L 9474757 9474803 chr2L 9474876 9474919 8 118 1.5 1.0 1.2 3.6 162 chr2L 9474757 intergenic not near genes chr2L 9474838 intergenic not near genes chr2L 9474919 intergenic not near genes chr2L_8_9470001 chr2L_9470001 Sg4 220 chr2L 9493223 9493275 chr2L 9493332 9493384 16 107 3.5 3.0 3.2 3.8 161 chr2L 9493223 intron Gdi - chr2L 9493304 intron Gdi - chr2L 9493384 intron Gdi - chr2L_16_9490001 chr2L_9490001 Sg4 221 chr2L 9506404 9506459 chr2L 9506579 9506634 15 175 3.5 4.5 4.0 3.0 230 chr2L 9506404 intron CG33298 + chr2L 9506519 intron CG33298 + chr2L 9506634 intron CG33298 + chr2L_15_9505001 chr2L_9505001 Sg4 222 chr2L 9509303 9509349 chr2L 9509409 9509456 10 107 0.0 1.5 0.8 5.6 153 chr2L 9509303 intron CG33298 + chr2L 9509380 intron CG33298 + chr2L 9509456 intron CG33298 + chr2L_10_9505001 chr2L_9505001 Sg4 223 chr2L 9527297 9527312 chr2L 9527404 9527419 6 106 1.0 1.5 1.2 2.7 122 chr2L 9527297 intron Oatp30B + chr2L 9527358 intron Oatp30B + chr2L 9527419 intron Oatp30B + chr2L_6_9525001 chr2L_9525001 Sg4 224 chr2L 9556868 9556916 chr2L 9556983 9557011 5 108 1.5 2.5 2.0 1.7 143 chr2L 9556868 intron jp - chr2L 9556940 intron jp - chr2L 9557011 intron jp - chr2L_5_9555001 chr2L_9555001 Sg4 225 chr2L 9558308 9558327 chr2L 9558420 9558430 7 111 0.0 1.5 0.8 3.9 122 chr2L 9558308 intron jp - chr2L 9558369 intron jp - chr2L 9558430 intron jp - chr2L_7_9555001 chr2L_9555001 Sg4 226 chr2L 9575987 9576033 chr2L 9577087 9577122 6 1099 24.0 12.0 18.0 0.3 1135 chr2L 9575987 exon Mtpalpha - chr2L 9576554 5` UTR Mtpalpha - chr2L 9577122 intergenic Mtpalpha - chr2L_6_9575001 chr2L_9575001 Sg4 227 chr2L 9593333 9593390 chr2L 9593440 9593496 14 107 1.5 4.0 2.8 3.7 163 chr2L 9593333 intergenic not near genes chr2L 9593414 intergenic not near genes chr2L 9593496 intergenic not near genes chr2L_14_9590001 chr2L_9590001 Sg4 228 chr2L 9618868 9618911 chr2L 9618970 9619013 10 102 2.5 2.5 2.5 2.9 145 chr2L 9618868 intron GlcAT-S + chr2L 9618940 intron GlcAT-S + chr2L 9619013 intron GlcAT-S + chr2L_10_9615001 chr2L_9615001 Sg4 229 chr2L 9719760 9719779 chr2L 9719867 9719886 5 106 0.0 3.0 1.5 2.0 126 chr2L 9719760 intron Nckx30C - chr2L 9719823 intron Nckx30C - chr2L 9719886 intron Nckx30C - chr2L_5_9715001 chr2L_9715001 Sg4 230 chr2L 9730951 9731005 chr2L 9731059 9731113 33 107 5.5 5.5 5.5 5.1 162 chr2L 9730951 intron Nckx30C - chr2L 9731032 intron Nckx30C - chr2L 9731113 intron Nckx30C - chr2L_33_9730001 chr2L_9730001 Sg4 231 chr2L 9770744 9770763 chr2L 9770874 9770893 10 130 8.0 13.0 10.5 0.9 149 chr2L 9770744 intron ppk18 - chr2L 9770818 intron ppk18 - chr2L 9770893 exon ppk18 - chr2L_10_9770001 chr2L_9770001 Sg4 232 chr2L 9828238 9828271 chr2L 9828343 9828376 11 105 2.0 11.0 6.5 1.5 138 chr2L 9828238 intron nAChRalpha6 - chr2L 9828307 intron nAChRalpha6 - chr2L 9828376 intron nAChRalpha6 - chr2L_11_9825001 chr2L_9825001 Sg4 233 chr2L 9829551 9829603 chr2L 9829778 9829830 12 227 3.5 3.5 3.5 2.7 279 chr2L 9829551 intron nAChRalpha6 - chr2L 9829690 intron nAChRalpha6 - chr2L 9829830 intron nAChRalpha6 - chr2L_12_9825001 chr2L_9825001 Sg4 234 chr2L 9871501 9871532 chr2L 9871610 9871641 7 109 3.0 1.0 2.0 2.3 140 chr2L 9871501 intron nAChRalpha6 - chr2L 9871571 intron nAChRalpha6 - chr2L 9871641 intron nAChRalpha6 - chr2L_7_9870001 chr2L_9870001 Sg4 235 chr2L 9973701 9973757 chr2L 9980845 9980901 HMS-Beagle 22 7142 5.0 4.5 4.8 3.8 7200 chr2L 9973701 intergenic not near genes chr2L 9977301 intergenic not near genes chr2L 9980901 intergenic not near genes chr2L_22_9975001 chr2L_9975001 Sg4 236 chr2L 10051701 10051727 chr2L 10051810 10051820 10 108 11.0 9.0 10.0 0.9 119 chr2L 10051701 5` UTR CR44874 + chr2L 10051760 5` UTR CR44874 + chr2L 10051820 5` UTR CR44874 + chr2L_10_10050001 chr2L_10050001 Sg4 237 chr2L 10051736 10051753 chr2L 10051809 10051832 13 92 5.5 9.0 7.2 1.6 96 chr2L 10051736 5` UTR CR44874 + chr2L 10051784 5` UTR CR44874 + chr2L 10051832 5` UTR CR44874 + chr2L_13_10050001 chr2L_10050001 Sg4 238 chr2L 10095608 10095661 chr2L 10095713 10095765 14 105 2.5 3.0 2.8 3.7 157 chr2L 10095608 intron CG44153 - chr2L 10095686 intron CG44153 - chr2L 10095765 intron CG44153 - chr2L_14_10095001 chr2L_10095001 Sg4 239 chr2L 10105259 10105311 chr2L 10105360 10105412 15 101 5.0 5.5 5.2 2.4 153 chr2L 10105259 intron,intron CG44153 -,CG34109 + chr2L 10105336 intron,intron CG44153 -,CG34109 + chr2L 10105412 intron,intron CG44153 -,CG34109 + chr2L_15_10105001 chr2L_10105001 Sg4 240 chr2L 10156212 10156266 chr2L 10164087 10164141 blood 16 7872 4.5 3.5 4.0 3.2 7929 chr2L 10156212 intron,3` UTR CG44153 -,CG4839 + chr2L 10160176 intron CG44153 - chr2L 10164141 intron CG44153 - chr2L_16_10160001 chr2L_10160001 Sg4 241 chr2L 10176023 10176024 chr2L 16071771 16071771 8 5895747 17.0 24.5 20.8 0.4 5895748 chr2L 10176023 intron CG44153 - chr2L 13123897 intergenic not near genes chr2L 16071771 intron beat-Ia + chr2L_8_13120001 chr2L_13120001 Sg4 242 chr2L 10180558 10180606 chr2L 10180670 10180700 13 101 5.5 0.0 2.8 3.4 142 chr2L 10180558 intergenic CG44153 - chr2L 10180629 intergenic CG44153 - chr2L 10180700 intergenic CG44153 - chr2L_13_10180001 chr2L_10180001 Sg4 243 chr2L 10204478 10204521 chr2L 10204586 10204629 12 108 2.0 1.0 1.5 4.8 151 chr2L 10204478 intergenic CG34159 -,CG5734 - chr2L 10204554 intergenic CG5734 -,CG34159 - chr2L 10204629 intergenic CG5734 -,CG34159 - chr2L_12_10200001 chr2L_10200001 Sg4 244 chr2L 10209830 10209844 chr2L 10209932 10209946 5 102 2.5 1.5 2.0 1.7 116 chr2L 10209830 intergenic CG5727 -,CR44845 +,CG5731 - chr2L 10209888 3` UTR CG5727 - chr2L 10209946 3` UTR CG5727 - chr2L_5_10205001 chr2L_10205001 Sg4 245 chr2L 10226010 10226023 chr2L 10226266 10226279 6 256 11.5 21.0 16.2 0.3 269 chr2L 10226010 intron CG5708 - chr2L 10226144 intron CG5708 - chr2L 10226279 intron CG5708 - chr2L_6_10225001 chr2L_10225001 Sg4 246 chr2L 10258410 10258429 chr2L 10258520 10258539 9 110 1.5 5.0 3.2 2.1 129 chr2L 10258410 intron Pten - chr2L 10258474 intron Pten - chr2L 10258539 intron Pten - chr2L_9_10255001 chr2L_10255001 Sg4 247 chr2L 10340747 10340928 chr2L 10340880 10341054 5 127 12.5 16.5 14.5 0.3 307 chr2L 10340747 exon SamDC + chr2L 10340900 exon SamDC + chr2L 10341054 exon SamDC + chr2L_5_10340001 chr2L_10340001 Sg4 248 chr2L 10421313 10421322 chr2L 10421377 10421395 5 69 21.0 13.0 17.0 0.3 82 chr2L 10421313 exon pie - chr2L 10421354 exon pie - chr2L 10421395 exon pie - chr2L_5_10420001 chr2L_10420001 Sg4 249 chr2L 10480021 10480061 chr2L 10480130 10480170 5 109 3.0 0.0 1.5 2.0 149 chr2L 10480021 intron RluA-2 + chr2L 10480096 intron RluA-2 + chr2L 10480170 intron RluA-2 + chr2L_5_10480001 chr2L_10480001 Sg4 250 chr2L 10495284 10495464 chr2L 10495386 10495575 17 106 1.5 4.5 3.0 4.2 291 chr2L 10495284 intron Myo31DF - chr2L 10495430 intron Myo31DF - chr2L 10495575 intron Myo31DF - chr2L_17_10495001 chr2L_10495001 Sg4 251 chr2L 10515337 10515381 chr2L 10515455 10515499 16 118 2.0 3.0 2.5 4.6 162 chr2L 10515337 intron,intron CG45083 -,Fatp - chr2L 10515418 intron,intron CG45083 -,Fatp - chr2L 10515499 intron,intron CG45083 -,Fatp - chr2L_16_10515001 chr2L_10515001 Sg4 252 chr2L 10531590 10531626 chr2L 10531707 10531743 4 117 0.0 1.0 0.5 2.7 153 chr2L 10531590 3` UTR Lip4 + chr2L 10531666 3` UTR Lip4 + chr2L 10531743 3` UTR Lip4 + chr2L_4_10530001 chr2L_10530001 Sg4 253 chr2L 10563896 10563939 chr2L 10564014 10564057 7 117 3.0 1.5 2.2 2.2 161 chr2L 10563896 intron Trim9 + chr2L 10563976 intron Trim9 + chr2L 10564057 intron Trim9 + chr2L_7_10560001 chr2L_10560001 Sg4 254 chr2L 10572681 10572730 chr2L 10572787 10572836 12 106 4.5 2.5 3.5 2.7 155 chr2L 10572681 intron Trim9 + chr2L 10572758 intron Trim9 + chr2L 10572836 intron Trim9 + chr2L_12_10570001 chr2L_10570001 Sg4 255 chr2L 10582465 10582477 chr2L 10583080 10583092 6 615 4.0 11.5 7.8 0.7 627 chr2L 10582465 intron Trim9 + chr2L 10582778 intron Trim9 + chr2L 10583092 intron Trim9 + chr2L_6_10580001 chr2L_10580001 Sg4 256 chr2L 10592818 10592855 chr2L 10600504 10600533 opus 6 7685 3.0 4.0 3.5 1.3 7715 chr2L 10592818 intron Trim9 + chr2L 10596676 intron Trim9 + chr2L 10600533 intron Trim9 + chr2L_6_10595001 chr2L_10595001 Sg4 257 chr2L 10640622 10640671 chr2L 10640734 10640785 21 114 2.5 3.0 2.8 5.5 163 chr2L 10640622 exon CG31872 + chr2L 10640704 exon CG31872 + chr2L 10640785 exon CG31872 + chr2L_21_10640001 chr2L_10640001 Sg4 258 chr2L 10704893 10704948 chr2L 10705013 10705068 4 120 3.5 2.5 3.0 1.0 175 chr2L 10704893 intron,exon Lip2 -,CG6415 + chr2L 10704980 intron Lip2 - chr2L 10705068 exon Lip2 - chr2L_4_10700001 chr2L_10700001 Sg4 259 chr2L 10785039 10785086 chr2L 10785140 10785187 11 97 6.5 5.5 6.0 1.6 148 chr2L 10785039 intron CG31869 - chr2L 10785113 intron CG31869 - chr2L 10785187 intron CG31869 - chr2L_11_10785001 chr2L_10785001 Sg4 260 chr2L 10791833 10791893 chr2L 10791938 10791998 27 105 4.5 4.5 4.5 4.9 165 chr2L 10791833 intron CG31869 - chr2L 10791916 intron CG31869 - chr2L 10791998 intron CG31869 - chr2L_27_10790001 chr2L_10790001 Sg4 261 chr2L 10862862 10862869 chr2L 10864451 10864508 Rt1c 4 1621 4.5 4.5 4.5 0.7 1646 chr2L 10862862 3` UTR CR43807 - chr2L 10863685 intron CR43807 - chr2L 10864508 3` UTR CR43807 - chr2L_4_10860001 chr2L_10860001 Sg4 262 chr2L 10912966 10912998 chr2L 10913070 10913091 7 102 8.0 4.0 6.0 1.0 125 chr2L 10912966 intergenic not near genes chr2L 10913028 intergenic not near genes chr2L 10913091 intergenic not near genes chr2L_7_10910001 chr2L_10910001 Sg4 263 chr2L 10946929 10946969 chr2L 10956169 10956209 roo 17 9240 5.5 8.0 6.8 2.2 9280 chr2L 10946929 intron dpr2 - chr2L 10951569 intron dpr2 - chr2L 10956209 intron dpr2 - chr2L_17_10950001 chr2L_10950001 Sg4 264 chr2L 11065853 11065895 chr2L 11066814 11066857 8 962 3.0 4.0 3.5 1.8 1004 chr2L 11065853 intron Samuel - chr2L 11066355 intron Samuel - chr2L 11066857 5` UTR Samuel - chr2L_8_11065001 chr2L_11065001 Sg4 265 chr2L 11183766 11183804 chr2L 11183887 11183920 8 120 2.0 1.0 1.5 3.2 154 chr2L 11183766 intron Ca-beta - chr2L 11183843 intron Ca-beta - chr2L 11183920 intron Ca-beta - chr2L_8_11180001 chr2L_11180001 Sg4 266 chr2L 11224047 11224091 chr2L 11224183 11224227 12 136 2.0 6.5 4.2 2.3 180 chr2L 11224047 intron ab + chr2L 11224137 intron ab + chr2L 11224227 intron ab + chr2L_12_11220001 chr2L_11220001 Sg4 267 chr2L 11245247 11245257 chr2L 11245337 11245361 4 100 5.5 6.0 5.8 0.6 114 chr2L 11245247 intron ab + chr2L 11245304 intron ab + chr2L 11245361 intron ab + chr2L_4_11245001 chr2L_11245001 Sg4 268 chr2L 11245260 11245268 chr2L 11245333 11245372 6 97 4.0 5.0 4.5 1.1 112 chr2L 11245260 intron ab + chr2L 11245316 intron ab + chr2L 11245372 intron ab + chr2L_6_11245001 chr2L_11245001 Sg4 269 chr2L 11281905 11281927 chr2L 11282007 11282029 8 102 3.0 1.5 2.2 2.5 124 chr2L 11281905 3` UTR Ppt2 + chr2L 11281967 intergenic Ppt2 +,mre11 + chr2L 11282029 intergenic mre11 +,Ppt2 + chr2L_8_11280001 chr2L_11280001 Sg4 270 chr2L 11292359 11292402 chr2L 11292461 11292509 15 106 3.5 6.0 4.8 2.6 150 chr2L 11292359 intergenic not near genes chr2L 11292434 intergenic not near genes chr2L 11292509 intergenic not near genes chr2L_15_11290001 chr2L_11290001 Sg4 271 chr2L 11298799 11298849 chr2L 11298901 11298950 5 102 1.5 0.0 0.8 2.8 151 chr2L 11298799 intergenic not near genes chr2L 11298874 intergenic not near genes chr2L 11298950 intergenic not near genes chr2L_5_11295001 chr2L_11295001 Sg4 272 chr2L 11308982 11309022 chr2L 11309115 11309155 11 131 4.5 1.5 3.0 2.8 173 chr2L 11308982 intergenic not near genes chr2L 11309068 intergenic not near genes chr2L 11309155 intergenic not near genes chr2L_11_11305001 chr2L_11305001 Sg4 273 chr2L 11313094 11313129 chr2L 11313197 11313233 5 103 10.5 6.5 8.5 0.5 139 chr2L 11313094 intergenic not near genes chr2L 11313164 intergenic not near genes chr2L 11313233 intergenic not near genes chr2L_5_11310001 chr2L_11310001 Sg4 274 chr2L 11315245 11315272 chr2L 11317674 11317701 G2 8 2428 2.0 2.0 2.0 2.7 2456 chr2L 11315245 intergenic not near genes chr2L 11316473 intergenic not near genes chr2L 11317701 intergenic not near genes chr2L_8_11315001 chr2L_11315001 Sg4 275 chr2L 11404764 11404810 chr2L 11404865 11404911 11 101 1.5 2.0 1.8 3.9 147 chr2L 11404764 intergenic not near genes chr2L 11404838 intergenic not near genes chr2L 11404911 intergenic not near genes chr2L_11_11400001 chr2L_11400001 Sg4 276 chr2L 11413269 11413319 chr2L 11413418 11413468 7 149 5.0 2.5 3.8 1.5 199 chr2L 11413269 intergenic not near genes chr2L 11413368 intergenic not near genes chr2L 11413468 intergenic not near genes chr2L_7_11410001 chr2L_11410001 Sg4 277 chr2L 11418639 11418681 chr2L 11418738 11418785 15 103 4.0 6.0 5.0 2.5 146 chr2L 11418639 intergenic not near genes chr2L 11418712 intergenic not near genes chr2L 11418785 intergenic not near genes chr2L_15_11415001 chr2L_11415001 Sg4 278 chr2L 11450105 11450153 chr2L 11450216 11450260 7 110 0.0 2.5 1.2 3.2 155 chr2L 11450105 intergenic not near genes chr2L 11450182 intergenic not near genes chr2L 11450260 intergenic not near genes chr2L_7_11450001 chr2L_11450001 Sg4 279 chr2L 11478663 11478706 chr2L 11478775 11478818 13 112 1.5 3.5 2.5 3.7 155 chr2L 11478663 intergenic not near genes chr2L 11478740 intergenic not near genes chr2L 11478818 intergenic not near genes chr2L_13_11475001 chr2L_11475001 Sg4 280 chr2L 11496613 11496652 chr2L 11496716 11496751 7 102 3.0 3.0 3.0 1.8 138 chr2L 11496613 intergenic CG6488 - chr2L 11496682 intergenic CG6488 - chr2L 11496751 intergenic CG6488 - chr2L_7_11495001 chr2L_11495001 Sg4 281 chr2L 11540311 11540338 chr2L 11540496 11540523 5 185 3.0 3.0 3.0 1.2 212 chr2L 11540311 intergenic not near genes chr2L 11540417 intergenic not near genes chr2L 11540523 intergenic not near genes chr2L_5_11540001 chr2L_11540001 Sg4 282 chr2L 11550612 11550666 chr2L 11550726 11550780 6 114 1.0 1.5 1.2 2.7 168 chr2L 11550612 intergenic not near genes chr2L 11550696 intergenic not near genes chr2L 11550780 intergenic not near genes chr2L_6_11550001 chr2L_11550001 Sg4 283 chr2L 11563618 11563659 chr2L 11568847 11568888 copia 12 5228 6.0 4.0 5.0 2.0 5270 chr2L 11563618 intergenic not near genes chr2L 11566253 intergenic not near genes chr2L 11568888 intergenic not near genes chr2L_12_11565001 chr2L_11565001 Sg4 284 chr2L 11614038 11614063 chr2L 11615557 11615562 hopper2 4 1510 4.0 3.0 3.5 0.9 1524 chr2L 11614038 intron kek2 + chr2L 11614800 intron kek2 + chr2L 11615562 intron kek2 + chr2L_4_11610001 chr2L_11610001 Sg4 285 chr2L 11614071 11614085 chr2L 11615550 11615605 hopper2 4 1505 1.0 2.0 1.5 1.6 1534 chr2L 11614071 intron kek2 + chr2L 11614838 intron kek2 + chr2L 11615605 intron kek2 + chr2L_4_11610001 chr2L_11610001 Sg4 286 chr2L 11672112 11672136 chr2L 11672244 11672268 6 132 3.0 2.0 2.5 1.7 156 chr2L 11672112 intergenic not near genes chr2L 11672190 intergenic not near genes chr2L 11672268 intergenic not near genes chr2L_6_11670001 chr2L_11670001 Sg4 287 chr2L 11710138 11710151 chr2L 11710238 11710252 4 101 2.5 0.0 1.2 1.8 114 chr2L 11710138 intergenic not near genes chr2L 11710195 intergenic not near genes chr2L 11710252 intergenic not near genes chr2L_4_11710001 chr2L_11710001 Sg4 288 chr2L 11713505 11713521 chr2L 11720973 11721014 blood 7 7486 5.0 3.5 4.2 1.3 7509 chr2L 11713505 intergenic not near genes chr2L 11717260 intergenic not near genes chr2L 11721014 intergenic CR44143 + chr2L_7_11715001 chr2L_11715001 Sg4 289 chr2L 11736514 11736551 chr2L 11736620 11736657 9 106 6.5 3.5 5.0 1.5 143 chr2L 11736514 5` UTR CR44145 + chr2L 11736586 5` UTR CR44145 + chr2L 11736657 5` UTR CR44145 + chr2L_9_11735001 chr2L_11735001 Sg4 290 chr2L 11825681 11825696 chr2L 11825785 11825800 6 104 8.0 0.0 4.0 1.2 119 chr2L 11825681 intron Pde1c - chr2L 11825740 intron Pde1c - chr2L 11825800 intron Pde1c - chr2L_6_11825001 chr2L_11825001 Sg4 291 chr2L 11841346 11841395 chr2L 11841449 11841490 6 101 2.0 0.5 1.2 2.7 144 chr2L 11841346 intron Pde1c - chr2L 11841418 intron Pde1c - chr2L 11841490 intron Pde1c - chr2L_6_11840001 chr2L_11840001 Sg4 292 chr2L 11886430 11886450 chr2L 11886554 11886574 5 124 6.0 5.5 5.8 0.7 144 chr2L 11886430 intron Pde1c - chr2L 11886502 intron Pde1c - chr2L 11886574 intron Pde1c - chr2L_5_11885001 chr2L_11885001 Sg4 293 chr2L 11889404 11889448 chr2L 11889772 11889816 10 368 3.0 3.5 3.2 2.4 412 chr2L 11889404 intron Pde1c - chr2L 11889610 intron Pde1c - chr2L 11889816 intron Pde1c - chr2L_10_11885001 chr2L_11885001 Sg4 294 chr2L 11892520 11892560 chr2L 11892634 11892674 9 114 1.5 2.0 1.8 3.2 154 chr2L 11892520 intron Pde1c - chr2L 11892597 intron Pde1c - chr2L 11892674 intron Pde1c - chr2L_9_11890001 chr2L_11890001 Sg4 295 chr2L 11976073 11976116 chr2L 11976175 11976218 8 102 4.5 1.0 2.8 2.1 145 chr2L 11976073 intergenic not near genes chr2L 11976146 intergenic not near genes chr2L 11976218 intergenic not near genes chr2L_8_11975001 chr2L_11975001 Sg4 296 chr2L 12031376 12031415 chr2L 12031482 12031520 6 106 2.0 1.5 1.8 2.1 144 chr2L 12031376 intron dmGlut + chr2L 12031448 intron dmGlut + chr2L 12031520 intron dmGlut + chr2L_6_12030001 chr2L_12030001 Sg4 297 chr2L 12033573 12033629 chr2L 12033677 12033733 17 104 3.5 1.5 2.5 4.9 160 chr2L 12033573 3` UTR dmGlut + chr2L 12033653 3` UTR dmGlut + chr2L 12033733 3` UTR dmGlut + chr2L_17_12030001 chr2L_12030001 Sg4 298 chr2L 12067318 12067349 chr2L 12074395 12074426 297 9 7077 2.0 3.5 2.8 2.4 7108 chr2L 12067318 intergenic not near genes chr2L 12070872 intergenic not near genes chr2L 12074426 intergenic not near genes chr2L_9_12070001 chr2L_12070001 Sg4 299 chr2L 12106783 12106808 chr2L 12107179 12107204 5 396 15.0 9.0 12.0 0.4 421 chr2L 12106783 3` UTR Aats-thr + chr2L 12106994 3` UTR Aats-thr + chr2L 12107204 intergenic Rab6 -,Aats-thr + chr2L_5_12105001 chr2L_12105001 Sg4 300 chr2L 12171444 12171456 chr2L 12171546 12171558 4 102 1.5 4.5 3.0 1.0 114 chr2L 12171444 3` UTR CG6583 - chr2L 12171501 3` UTR CG6583 - chr2L 12171558 3` UTR CG6583 - chr2L_4_12170001 chr2L_12170001 Sg4 301 chr2L 12175789 12175847 chr2L 12175895 12175954 6 106 4.0 0.0 2.0 2.0 165 chr2L 12175789 intron,intron aret +,atilla - chr2L 12175872 intron,intron aret +,atilla - chr2L 12175954 intron,intron aret +,atilla - chr2L_6_12175001 chr2L_12175001 Sg4 302 chr2L 12210023 12210041 chr2L 12210137 12210151 8 113 3.5 2.0 2.8 2.1 128 chr2L 12210023 intron aret + chr2L 12210087 intron aret + chr2L 12210151 intron aret + chr2L_8_12210001 chr2L_12210001 Sg4 303 chr2L 12272136 12272197 chr2L 12272239 12272295 13 101 2.0 2.0 2.0 4.3 159 chr2L 12272136 intron aret + chr2L 12272216 intron aret + chr2L 12272295 intron aret + chr2L_13_12270001 chr2L_12270001 Sg4 304 chr2L 12287800 12287814 chr2L 12287900 12287915 4 100 1.0 3.5 2.2 1.2 115 chr2L 12287800 intron aret + chr2L 12287858 intron aret + chr2L 12287915 intron aret + chr2L_4_12285001 chr2L_12285001 Sg4 305 chr2L 12366843 12366882 chr2L 12366954 12366993 6 111 3.5 2.0 2.8 1.6 150 chr2L 12366843 intron bru-2 + chr2L 12366918 intron bru-2 + chr2L 12366993 intron bru-2 + chr2L_6_12365001 chr2L_12365001 Sg4 306 chr2L 12398644 12398684 chr2L 12398758 12398785 13 108 8.0 13.0 10.5 1.1 141 chr2L 12398644 exon Pkd2 + chr2L 12398714 exon Pkd2 + chr2L 12398785 exon Pkd2 + chr2L_13_12395001 chr2L_12395001 Sg4 307 chr2L 12410983 12411025 chr2L 12411087 12411127 7 104 2.5 0.0 1.2 3.2 144 chr2L 12410983 intron vir-1 - chr2L 12411055 intron vir-1 - chr2L 12411127 intron vir-1 - chr2L_7_12410001 chr2L_12410001 Sg4 308 chr2L 12474928 12474969 chr2L 12475131 12475172 6 203 4.0 2.5 3.2 1.4 244 chr2L 12474928 intron bun - chr2L 12475050 intron bun - chr2L 12475172 intron bun - chr2L_6_12475001 chr2L_12475001 Sg4 309 chr2L 12487875 12487915 chr2L 12487968 12488021 16 104 7.5 6.5 7.0 2.0 146 chr2L 12487875 intron bun - chr2L 12487948 intron bun - chr2L 12488021 intron bun - chr2L_16_12485001 chr2L_12485001 Sg4 310 chr2L 12558306 12558344 chr2L 12565449 12565498 HMS-Beagle 9 7151 1.0 2.5 1.8 3.2 7192 chr2L 12558306 intergenic not near genes chr2L 12561902 intergenic not near genes chr2L 12565498 intergenic not near genes chr2L_9_12560001 chr2L_12560001 Sg4 311 chr2L 12647578 12647616 chr2L 12647714 12647757 9 141 0.0 7.0 3.5 2.0 179 chr2L 12647578 intergenic not near genes chr2L 12647668 intergenic not near genes chr2L 12647757 intergenic not near genes chr2L_9_12645001 chr2L_12645001 Sg4 312 chr2L 12728900 12728947 chr2L 12729165 12729212 pogo 11 265 5.0 3.0 4.0 2.2 312 chr2L 12728900 intron MRP + chr2L 12729056 intron MRP + chr2L 12729212 exon MRP + chr2L_11_12725001 chr2L_12725001 Sg4 313 chr2L 12731036 12731078 chr2L 12735828 12735859 F-element 7 4789 6.0 3.5 4.8 1.2 4823 chr2L 12731036 intron MRP + chr2L 12733448 intron MRP + chr2L 12735859 intron MRP + chr2L_7_12730001 chr2L_12730001 Sg4 314 chr2L 12739163 12739196 chr2L 12743968 12744002 Doc 14 4805 3.0 6.0 4.5 2.5 4839 chr2L 12739163 exon MRP + chr2L 12741582 intron MRP + chr2L 12744002 exon MRP + chr2L_14_12740001 chr2L_12740001 Sg4 315 chr2L 12746473 12746500 chr2L 12800951 12800978 4 54478 9.5 13.0 11.2 0.3 54505 chr2L 12746473 intergenic not near genes chr2L 12773726 intergenic not near genes chr2L 12800978 intergenic not near genes chr2L_4_12770001 chr2L_12770001 Sg4 316 chr2L 12748270 12748324 chr2L 12748373 12748427 12 101 3.5 1.5 2.5 3.4 157 chr2L 12748270 intergenic not near genes chr2L 12748348 intergenic not near genes chr2L 12748427 intergenic not near genes chr2L_12_12745001 chr2L_12745001 Sg4 317 chr2L 12763145 12763189 chr2L 12763261 12763305 8 112 0.5 3.5 2.0 2.7 160 chr2L 12763145 intergenic not near genes chr2L 12763225 intergenic not near genes chr2L 12763305 intergenic not near genes chr2L_8_12760001 chr2L_12760001 Sg4 318 chr2L 12833041 12833071 chr2L 12833146 12833178 10 107 3.0 5.0 4.0 2.0 137 chr2L 12833041 intergenic not near genes chr2L 12833110 intergenic not near genes chr2L 12833178 intergenic not near genes chr2L_10_12830001 chr2L_12830001 Sg4 319 chr2L 12861677 12861728 chr2L 12863169 12863203 hobo 13 1490 3.5 6.0 4.8 2.2 1526 chr2L 12861677 intergenic not near genes chr2L 12862440 intergenic not near genes chr2L 12863203 intergenic not near genes chr2L_13_12860001 chr2L_12860001 Sg4 320 chr2L 12894005 12894037 chr2L 12895497 12895529 hobo 11 1492 7.5 7.5 7.5 1.3 1524 chr2L 12894005 intergenic not near genes chr2L 12894767 intergenic not near genes chr2L 12895529 intergenic not near genes chr2L_11_12890001 chr2L_12890001 Sg4 321 chr2L 12905451 12905499 chr2L 12905560 12905608 11 109 3.0 2.0 2.5 3.1 157 chr2L 12905451 intergenic not near genes chr2L 12905530 intergenic not near genes chr2L 12905608 intergenic not near genes chr2L_11_12905001 chr2L_12905001 Sg4 322 chr2L 12930469 12930496 chr2L 12930570 12930587 6 99 5.5 2.5 4.0 1.2 118 chr2L 12930469 intergenic not near genes chr2L 12930528 intergenic not near genes chr2L 12930587 intergenic not near genes chr2L_6_12930001 chr2L_12930001 Sg4 323 chr2L 12933827 12933876 chr2L 12941319 12941368 blood 15 7491 4.0 7.0 5.5 2.3 7541 chr2L 12933827 intergenic not near genes chr2L 12937598 intergenic not near genes chr2L 12941368 intergenic not near genes chr2L_15_12935001 chr2L_12935001 Sg4 324 chr2L 12963769 12963820 chr2L 12963896 12963947 12 126 4.5 5.0 4.8 2.1 178 chr2L 12963769 intergenic not near genes chr2L 12963858 intergenic not near genes chr2L 12963947 intergenic not near genes chr2L_12_12960001 chr2L_12960001 Sg4 325 chr2L 13093833 13093861 chr2L 13093936 13093964 6 103 4.0 2.5 3.2 1.4 131 chr2L 13093833 intergenic not near genes chr2L 13093898 intergenic not near genes chr2L 13093964 intergenic not near genes chr2L_6_13090001 chr2L_13090001 Sg4 326 chr2L 13154096 13154121 chr2L 13154199 13154224 4 103 2.0 2.5 2.2 1.2 128 chr2L 13154096 intergenic not near genes chr2L 13154160 intergenic not near genes chr2L 13154224 intergenic not near genes chr2L_4_13150001 chr2L_13150001 Sg4 327 chr2L 13212427 13212467 chr2L 13216554 13216599 15 4130 3.0 4.0 3.5 3.3 4172 chr2L 13212427 3` UTR kek4 - chr2L 13214513 exon kek4 - chr2L 13216599 3` UTR CG9426 - chr2L_15_13210001 chr2L_13210001 Sg4 328 chr2L 13253875 13253915 chr2L 13253988 13254028 11 113 3.0 6.0 4.5 2.0 153 chr2L 13253875 intron CG31728 + chr2L 13253952 intron CG31728 + chr2L 13254028 intron CG31728 + chr2L_11_13250001 chr2L_13250001 Sg4 329 chr2L 13255263 13255299 chr2L 13255431 13255467 9 168 1.0 6.0 3.5 2.0 204 chr2L 13255263 intron CG31728 + chr2L 13255365 intron CG31728 + chr2L 13255467 exon CG31728 + chr2L_9_13255001 chr2L_13255001 Sg4 330 chr2L 13400124 13400168 chr2L 13400633 13400677 16 509 2.0 2.5 2.2 5.0 553 chr2L 13400124 intron CG7110 + chr2L 13400400 intron CG7110 + chr2L 13400677 intron CG7110 + chr2L_16_13400001 chr2L_13400001 Sg4 331 chr2L 13405634 13405679 chr2L 13410452 13410501 Doc 7 4820 8.5 3.0 5.8 1.0 4867 chr2L 13405634 exon CG7110 + chr2L 13408068 intron CG7110 + chr2L 13410501 intron CG7110 + chr2L_7_13405001 chr2L_13405001 Sg4 332 chr2L 13449445 13449496 chr2L 13456899 13456957 Quasimodo 9 7460 3.0 5.5 4.2 1.7 7512 chr2L 13449445 intron,5` UTR CG42784 +,Hsp60D - chr2L 13453201 intron CG42784 + chr2L 13456957 intron CG42784 + chr2L_9_13450001 chr2L_13450001 Sg4 333 chr2L 13481433 13481465 chr2L 13482065 13482097 jockey 10 632 5.0 7.5 6.2 1.4 664 chr2L 13481433 intron CG42784 + chr2L 13481765 intron CG42784 + chr2L 13482097 intron CG42784 + chr2L_10_13480001 chr2L_13480001 Sg4 334 chr2L 13493306 13493359 chr2L 13493614 13493665 12 306 4.0 1.0 2.5 3.4 359 chr2L 13493306 intron CG42784 + chr2L 13493486 intron CG42784 + chr2L 13493665 intron CG42784 + chr2L_12_13490001 chr2L_13490001 Sg4 335 chr2L 13558795 13558838 chr2L 13558910 13558950 7 115 5.0 2.5 3.8 1.5 155 chr2L 13558795 intron kuz + chr2L 13558872 intron kuz + chr2L 13558950 intron kuz + chr2L_7_13555001 chr2L_13555001 Sg4 336 chr2L 13560378 13560410 chr2L 13565224 13565256 F-element 8 4846 2.5 3.5 3.0 2.0 4878 chr2L 13560378 intron kuz + chr2L 13562817 intron kuz + chr2L 13565256 intron kuz + chr2L_8_13560001 chr2L_13560001 Sg4 337 chr2L 13605025 13605075 chr2L 13605127 13605141 5 88 6.5 2.0 4.2 1.0 116 chr2L 13605025 intron kuz + chr2L 13605083 intron kuz + chr2L 13605141 intron kuz + chr2L_5_13605001 chr2L_13605001 Sg4 338 chr2L 13620084 13620136 chr2L 13620335 13620387 23 250 7.0 7.0 7.0 2.9 303 chr2L 13620084 intron kuz + chr2L 13620236 intron kuz + chr2L 13620387 intron kuz + chr2L_23_13620001 chr2L_13620001 Sg4 339 chr2L 13615711 13615724 chr2L 13620400 13620413 4 4689 31.0 16.0 23.5 0.2 4702 chr2L 13615711 intron kuz + chr2L 13618062 intron kuz + chr2L 13620413 intron kuz + chr2L_4_13615001 chr2L_13615001 Sg4 340 chr2L 13622111 13622166 chr2L 13622235 13622264 11 115 4.5 1.5 3.0 2.8 153 chr2L 13622111 intron kuz + chr2L 13622188 intron kuz + chr2L 13622264 intron kuz + chr2L_11_13620001 chr2L_13620001 Sg4 341 chr2L 13701862 13701900 chr2L 13701967 13702005 7 105 2.5 5.0 3.8 1.5 143 chr2L 13701862 intron CG31814 - chr2L 13701934 intron CG31814 - chr2L 13702005 intron CG31814 - chr2L_7_13700001 chr2L_13700001 Sg4 342 chr2L 13761787 13761828 chr2L 13762923 13762964 Doc 7 1136 4.0 4.0 4.0 1.4 1177 chr2L 13761787 intron TM9SF4 + chr2L 13762376 intron TM9SF4 + chr2L 13762964 intron TM9SF4 + chr2L_7_13760001 chr2L_13760001 Sg4 343 chr2L 13853072 13853104 chr2L 13862246 13862279 roo 9 9174 6.5 5.5 6.0 1.3 9207 chr2L 13853072 intron CenG1A + chr2L 13857676 intron CenG1A + chr2L 13862279 intron CenG1A + chr2L_9_13855001 chr2L_13855001 Sg4 344 chr2L 13913566 13913603 chr2L 13913704 13913735 9 137 4.0 7.0 5.5 1.4 169 chr2L 13913566 intergenic not near genes chr2L 13913650 intergenic not near genes chr2L 13913735 intergenic not near genes chr2L_9_13910001 chr2L_13910001 Sg4 345 chr2L 13981498 13981529 chr2L 13981614 13981642 9 116 9.5 4.0 6.8 1.2 144 chr2L 13981498 exon NimC2 + chr2L 13981570 intron NimC2 + chr2L 13981642 intron NimC2 + chr2L_9_13980001 chr2L_13980001 Sg4 346 chr2L 14000027 14000080 chr2L 14000139 14000146 11 107 2.0 5.0 3.5 2.4 119 chr2L 14000027 intron rk - chr2L 14000086 intron rk - chr2L 14000146 intron rk - chr2L_11_14000001 chr2L_14000001 Sg4 347 chr2L 14071978 14072007 chr2L 14072182 14072211 4 204 10.0 5.5 7.8 0.5 233 chr2L 14071978 intron nAChRalpha5 + chr2L 14072094 intron nAChRalpha5 + chr2L 14072211 intron nAChRalpha5 + chr2L_4_14070001 chr2L_14070001 Sg4 348 chr2L 14072010 14072023 chr2L 14072177 14072227 5 196 6.5 5.0 5.8 0.7 217 chr2L 14072010 intron nAChRalpha5 + chr2L 14072118 intron nAChRalpha5 + chr2L 14072227 intron nAChRalpha5 + chr2L_5_14070001 chr2L_14070001 Sg4 349 chr2L 14246284 14246315 chr2L 14246387 14246427 7 107 0.0 0.0 0.0 7.0 143 chr2L 14246284 intergenic not near genes chr2L 14246356 intergenic not near genes chr2L 14246427 intergenic not near genes chr2L_7_14245001 chr2L_14245001 Sg4 350 chr2L 14333904 14333921 chr2L 14334023 14334041 5 123 3.5 4.5 4.0 1.0 137 chr2L 14333904 intergenic ms(2)34Fe +,CG33090 + chr2L 14333972 intergenic ms(2)34Fe +,CG33090 + chr2L 14334041 intergenic CG33090 +,ms(2)34Fe + chr2L_5_14330001 chr2L_14330001 Sg4 351 chr2L 14369121 14369160 chr2L 14369246 14369296 9 139 1.5 4.5 3.0 2.2 175 chr2L 14369121 intergenic not near genes chr2L 14369208 intergenic not near genes chr2L 14369296 intergenic not near genes chr2L_9_14365001 chr2L_14365001 Sg4 352 chr2L 14429408 14429453 chr2L 14429514 14429559 14 101 1.5 2.5 2.0 4.7 151 chr2L 14429408 3` UTR CR44732 - chr2L 14429484 3` UTR CR44732 - chr2L 14429559 3` UTR CR44732 - chr2L_14_14425001 chr2L_14425001 Sg4 353 chr2L 14487129 14487182 chr2L 14487254 14487307 19 125 3.5 5.0 4.2 3.7 178 chr2L 14487129 intergenic CR44731 + chr2L 14487218 intergenic CR44731 + chr2L 14487307 intergenic not near genes chr2L_19_14485001 chr2L_14485001 Sg4 354 chr2L 14564175 14564189 chr2L 14564276 14564285 5 100 11.0 7.0 9.0 0.5 110 chr2L 14564175 intergenic CG3473 - chr2L 14564230 intergenic not near genes chr2L 14564285 intergenic not near genes chr2L_5_14560001 chr2L_14560001 Sg4 355 chr2L 14564195 14564231 chr2L 14564273 14564327 9 95 5.0 7.0 6.0 1.3 132 chr2L 14564195 intergenic CG3473 - chr2L 14564261 intergenic not near genes chr2L 14564327 intergenic not near genes chr2L_9_14560001 chr2L_14560001 Sg4 356 chr2L 14565843 14565893 chr2L 14565951 14566000 7 108 2.0 4.0 3.0 1.8 157 chr2L 14565843 intergenic not near genes chr2L 14565922 intergenic not near genes chr2L 14566000 intergenic not near genes chr2L_7_14565001 chr2L_14565001 Sg4 357 chr2L 14570539 14570585 chr2L 14570875 14570927 22 340 4.0 5.5 4.8 3.8 388 chr2L 14570539 intergenic not near genes chr2L 14570733 intergenic not near genes chr2L 14570927 intergenic not near genes chr2L_22_14570001 chr2L_14570001 Sg4 358 chr2L 14588366 14588420 chr2L 14588545 14588562 10 172 3.0 2.5 2.8 2.6 196 chr2L 14588366 intergenic CG42680 - chr2L 14588464 intergenic CG42680 - chr2L 14588562 intergenic CG42680 - chr2L_10_14585001 chr2L_14585001 Sg4 359 chr2L 14621360 14621404 chr2L 14621474 14621529 11 123 5.5 2.5 4.0 2.2 169 chr2L 14621360 intron osp - chr2L 14621444 intron osp - chr2L 14621529 intron osp - chr2L_11_14620001 chr2L_14620001 Sg4 360 chr2L 14642550 14642592 chr2L 14651738 14651780 roo 12 9188 3.0 7.5 5.2 1.9 9230 chr2L 14642550 intron osp - chr2L 14647165 intron osp - chr2L 14651780 intron osp - chr2L_12_14645001 chr2L_14645001 Sg4 361 chr2L 14694238 14694285 chr2L 14694386 14694434 13 148 2.5 5.0 3.8 2.7 196 chr2L 14694238 intergenic not near genes chr2L 14694336 intergenic not near genes chr2L 14694434 intergenic not near genes chr2L_13_14690001 chr2L_14690001 Sg4 362 chr2L 14726555 14726568 chr2L 14726662 14726675 6 107 3.5 4.5 4.0 1.2 120 chr2L 14726555 intron CG42685 - chr2L 14726615 intron CG42685 - chr2L 14726675 intron CG42685 - chr2L_6_14725001 chr2L_14725001 Sg4 363 chr2L 14768913 14768948 chr2L 14769016 14769051 10 103 0.0 1.5 0.8 5.6 138 chr2L 14768913 intergenic not near genes chr2L 14768982 intergenic not near genes chr2L 14769051 intergenic not near genes chr2L_10_14765001 chr2L_14765001 Sg4 364 chr2L 14773208 14773262 chr2L 14773323 14773374 10 112 5.5 5.0 5.2 1.6 166 chr2L 14773208 intergenic not near genes chr2L 14773291 intergenic not near genes chr2L 14773374 intergenic CG4650 - chr2L_10_14770001 chr2L_14770001 Sg4 365 chr2L 14778791 14778794 chr2L 14779104 14779107 4 313 9.0 7.5 8.2 0.4 316 chr2L 14778791 intergenic not near genes chr2L 14778949 intergenic not near genes chr2L 14779107 intergenic not near genes chr2L_4_14775001 chr2L_14775001 Sg4 366 chr2L 14778800 14778836 chr2L 14779098 14779149 7 309 4.0 7.0 5.5 1.1 349 chr2L 14778800 intergenic not near genes chr2L 14778974 intergenic not near genes chr2L 14779149 intergenic not near genes chr2L_7_14775001 chr2L_14775001 Sg4 367 chr2L 14803861 14803904 chr2L 14809089 14809132 copia 15 5228 6.0 4.5 5.2 2.4 5271 chr2L 14803861 intergenic not near genes chr2L 14806496 intergenic not near genes chr2L 14809132 intergenic not near genes chr2L_15_14805001 chr2L_14805001 Sg4 368 chr2L 14823209 14823249 chr2L 14823319 14823359 13 110 0.0 5.5 2.8 3.4 150 chr2L 14823209 intergenic not near genes chr2L 14823284 intergenic not near genes chr2L 14823359 intergenic not near genes chr2L_13_14820001 chr2L_14820001 Sg4 369 chr2L 14839738 14839778 chr2L 14839839 14839879 14 101 1.5 3.0 2.2 4.4 141 chr2L 14839738 intergenic not near genes chr2L 14839808 intergenic not near genes chr2L 14839879 intergenic not near genes chr2L_14_14835001 chr2L_14835001 Sg4 370 chr2L 14840950 14841008 chr2L 14841063 14841120 8 112 2.0 2.0 2.0 2.7 170 chr2L 14840950 3` UTR CR43805 - chr2L 14841035 3` UTR CR43805 - chr2L 14841120 3` UTR CR43805 - chr2L_8_14840001 chr2L_14840001 Sg4 371 chr2L 14854580 14854612 chr2L 14854688 14854722 8 110 4.5 1.5 3.0 2.0 142 chr2L 14854580 intergenic not near genes chr2L 14854651 intergenic not near genes chr2L 14854722 intergenic not near genes chr2L_8_14850001 chr2L_14850001 Sg4 372 chr2L 14859197 14859246 chr2L 14859298 14859347 4 101 3.5 1.5 2.5 1.1 150 chr2L 14859197 intergenic not near genes chr2L 14859272 intergenic not near genes chr2L 14859347 intergenic not near genes chr2L_4_14855001 chr2L_14855001 Sg4 373 chr2L 14889931 14889977 chr2L 14890381 14890427 jockey 7 449 3.5 5.0 4.2 1.3 496 chr2L 14889931 intergenic not near genes chr2L 14890179 intergenic not near genes chr2L 14890427 intergenic not near genes chr2L_7_14890001 chr2L_14890001 Sg4 374 chr2L 14984362 14984405 chr2L 14991989 14992032 opus 10 7627 3.0 3.5 3.2 2.4 7670 chr2L 14984362 intron mol - chr2L 14988197 intron mol - chr2L 14992032 intron mol - chr2L_10_14985001 chr2L_14985001 Sg4 375 chr2L 15013140 15013177 chr2L 15013269 15013311 4 130 2.5 7.0 4.8 0.7 171 chr2L 15013140 intergenic CR43856 - chr2L 15013226 intergenic not near genes chr2L 15013311 intergenic not near genes chr2L_4_15010001 chr2L_15010001 Sg4 376 chr2L 15021424 15021465 chr2L 15021520 15021565 7 99 7.0 2.5 4.8 1.2 141 chr2L 15021424 intron GABA-B-R1 + chr2L 15021494 intron GABA-B-R1 + chr2L 15021565 intron GABA-B-R1 + chr2L_7_15020001 chr2L_15020001 Sg4 377 chr2L 15044685 15044728 chr2L 15044786 15044829 12 101 2.5 1.5 2.0 4.0 144 chr2L 15044685 intergenic ck - chr2L 15044757 intergenic ck - chr2L 15044829 intergenic ck - chr2L_12_15040001 chr2L_15040001 Sg4 378 chr2L 15078047 15078095 chr2L 15078160 15078205 12 113 1.5 2.0 1.8 4.3 158 chr2L 15078047 intron CG15270 + chr2L 15078126 intron CG15270 + chr2L 15078205 intron CG15270 + chr2L_12_15075001 chr2L_15075001 Sg4 379 chr2L 15098513 15098539 chr2L 15098618 15098644 10 104 7.0 3.0 5.0 1.7 131 chr2L 15098513 intergenic not near genes chr2L 15098578 intergenic not near genes chr2L 15098644 intergenic not near genes chr2L_10_15095001 chr2L_15095001 Sg4 380 chr2L 15122749 15122797 chr2L 15122854 15122902 10 105 3.0 1.0 2.0 3.3 153 chr2L 15122749 intergenic not near genes chr2L 15122826 intergenic not near genes chr2L 15122902 intergenic not near genes chr2L_10_15120001 chr2L_15120001 Sg4 381 chr2L 15163922 15163931 chr2L 15164024 15164033 6 102 1.5 5.0 3.2 1.4 111 chr2L 15163922 intron CG4168 - chr2L 15163978 intron CG4168 - chr2L 15164033 intron CG4168 - chr2L_6_15160001 chr2L_15160001 Sg4 382 chr2L 15226346 15226393 chr2L 15226447 15226494 12 100 3.5 1.5 2.5 3.4 148 chr2L 15226346 intergenic not near genes chr2L 15226420 intergenic not near genes chr2L 15226494 intergenic not near genes chr2L_12_15225001 chr2L_15225001 Sg4 383 chr2L 15309334 15309368 chr2L 15309462 15309496 8 128 4.0 1.0 2.5 2.3 162 chr2L 15309334 intergenic not near genes chr2L 15309415 intergenic not near genes chr2L 15309496 intergenic not near genes chr2L_8_15305001 chr2L_15305001 Sg4 384 chr2L 15314280 15314313 chr2L 15314389 15314422 7 109 5.0 3.0 4.0 1.4 142 chr2L 15314280 intergenic not near genes chr2L 15314351 intergenic not near genes chr2L 15314422 intergenic not near genes chr2L_7_15310001 chr2L_15310001 Sg4 385 chr2L 15332212 15332236 chr2L 15332598 15332607 5 381 5.0 0.0 2.5 1.4 395 chr2L 15332212 intergenic not near genes chr2L 15332410 intergenic not near genes chr2L 15332607 intergenic not near genes chr2L_5_15330001 chr2L_15330001 Sg4 386 chr2L 15375794 15375840 chr2L 15375931 15375977 7 137 0.5 4.5 2.5 2.0 183 chr2L 15375794 intergenic not near genes chr2L 15375886 intergenic not near genes chr2L 15375977 intergenic not near genes chr2L_7_15375001 chr2L_15375001 Sg4 387 chr2L 15446026 15446075 chr2L 15453520 15453569 blood 13 7494 3.0 2.5 2.8 3.4 7543 chr2L 15446026 intergenic not near genes chr2L 15449798 intergenic not near genes chr2L 15453569 intergenic not near genes chr2L_13_15445001 chr2L_15445001 Sg4 388 chr2L 15510909 15510963 chr2L 15511028 15511082 12 118 1.5 2.0 1.8 4.3 173 chr2L 15510909 intergenic not near genes chr2L 15510996 intergenic not near genes chr2L 15511082 intergenic not near genes chr2L_12_15510001 chr2L_15510001 Sg4 389 chr2L 15514302 15514326 chr2L 15514411 15514435 7 109 5.5 3.0 4.2 1.3 133 chr2L 15514302 intergenic not near genes chr2L 15514368 intergenic not near genes chr2L 15514435 intergenic not near genes chr2L_7_15510001 chr2L_15510001 Sg4 390 chr2L 15586390 15586433 chr2L 15593462 15593509 297 4 7075 1.5 1.5 1.5 1.6 7119 chr2L 15586390 intergenic not near genes chr2L 15589950 intergenic not near genes chr2L 15593509 intergenic not near genes chr2L_4_15585001 chr2L_15585001 Sg4 391 chr2L 15736970 15736996 chr2L 15737062 15737106 6 105 3.5 1.0 2.2 1.9 136 chr2L 15736970 intron CycE - chr2L 15737038 intron CycE - chr2L 15737106 intron CycE - chr2L_6_15735001 chr2L_15735001 Sg4 392 chr2L 15821061 15821079 chr2L 15821186 15821204 5 125 0.0 1.5 0.8 2.8 143 chr2L 15821061 intergenic not near genes chr2L 15821132 intergenic not near genes chr2L 15821204 intergenic not near genes chr2L_5_15820001 chr2L_15820001 Sg4 393 chr2L 15826871 15826879 chr2L 15829290 15829298 Tabor 4 2418 0.0 3.5 1.8 1.4 2427 chr2L 15826871 intergenic not near genes chr2L 15828084 intergenic not near genes chr2L 15829298 intergenic not near genes chr2L_4_15825001 chr2L_15825001 Sg4 394 chr2L 15887695 15887745 chr2L 15887853 15887903 13 156 1.0 3.0 2.0 4.3 208 chr2L 15887695 intergenic not near genes chr2L 15887799 intergenic not near genes chr2L 15887903 intergenic not near genes chr2L_13_15885001 chr2L_15885001 Sg4 395 chr2L 15956016 15956057 chr2L 15957508 15957534 hobo 10 1484 3.5 5.0 4.2 1.9 1518 chr2L 15956016 intron beat-Ib - chr2L 15956775 intron beat-Ib - chr2L 15957534 intron beat-Ib - chr2L_10_15955001 chr2L_15955001 Sg4 396 chr2L 16001444 16001493 chr2L 16001557 16001606 12 113 0.0 1.0 0.5 8.0 162 chr2L 16001444 intron beat-Ic + chr2L 16001525 intron beat-Ic + chr2L 16001606 intron beat-Ic + chr2L_12_16000001 chr2L_16000001 Sg4 397 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 19 145889 25.0 20.0 22.5 0.8 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_19_16140001 chr2L_16140001 Sg4 398 chr2L 16141148 16141194 chr2L 16146380 16146426 copia 15 5232 5.5 6.5 6.0 2.1 5278 chr2L 16141148 intergenic not near genes chr2L 16143787 intergenic not near genes chr2L 16146426 intergenic not near genes chr2L_15_16140001 chr2L_16140001 Sg4 399 chr2L 16153715 16153767 chr2L 16160794 16160846 297 20 7078 6.0 8.5 7.2 2.4 7131 chr2L 16153715 intergenic not near genes chr2L 16157280 intergenic not near genes chr2L 16160846 intergenic not near genes chr2L_20_16155001 chr2L_16155001 Sg4 400 chr2L 16197966 16197988 chr2L 16198125 16198147 6 159 1.5 5.5 3.5 1.3 181 chr2L 16197966 intergenic not near genes chr2L 16198056 intergenic not near genes chr2L 16198147 intergenic not near genes chr2L_6_16195001 chr2L_16195001 Sg4 401 chr2L 9084336 9084340 chr2L 16217660 16217660 13 7133321 10.5 20.0 15.2 0.8 7133324 chr2L 9084336 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_13_12650001 chr2L_12650001 Sg4 402 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 15 145889 25.0 20.0 22.5 0.6 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_15_16140001 chr2L_16140001 Sg4 403 chr2L 16224925 16224954 chr2L 16225078 16225088 5 145 4.0 9.5 6.8 0.6 163 chr2L 16224925 intergenic not near genes chr2L 16225006 intergenic not near genes chr2L 16225088 intergenic not near genes chr2L_5_16225001 chr2L_16225001 Sg4 404 chr2L 16280235 16280285 chr2L 16281431 16281481 1360 19 1195 4.0 5.5 4.8 3.3 1246 chr2L 16280235 intron crp - chr2L 16280858 intron crp - chr2L 16281481 intron crp - chr2L_19_16280001 chr2L_16280001 Sg4 405 chr2L 16363916 16363964 chr2L 16364187 16364235 8 271 1.0 4.0 2.5 2.3 319 chr2L 16363916 intergenic not near genes chr2L 16364076 intergenic not near genes chr2L 16364235 intergenic not near genes chr2L_8_16360001 chr2L_16360001 Sg4 406 chr2L 16391778 16391830 chr2L 16391879 16391931 5 101 2.0 0.0 1.0 2.5 153 chr2L 16391778 intergenic not near genes chr2L 16391854 intergenic not near genes chr2L 16391931 intergenic not near genes chr2L_5_16390001 chr2L_16390001 Sg4 407 chr2L 16407386 16407422 chr2L 16407541 16407576 11 155 3.0 3.0 3.0 2.8 190 chr2L 16407386 intron CG5888 - chr2L 16407481 intron CG5888 - chr2L 16407576 intron CG5888 - chr2L_11_16405001 chr2L_16405001 Sg4 408 chr2L 16408095 16408154 chr2L 16408227 16408281 5 131 0.0 2.5 1.2 2.3 186 chr2L 16408095 intron CG5888 - chr2L 16408188 intron CG5888 - chr2L 16408281 intron CG5888 - chr2L_5_16405001 chr2L_16405001 Sg4 409 chr2L 16468322 16468331 chr2L 16468438 16468447 5 115 0.0 3.5 1.8 1.8 125 chr2L 16468322 intron dac - chr2L 16468384 intron dac - chr2L 16468447 intron dac - chr2L_5_16465001 chr2L_16465001 Sg4 410 chr2L 16511944 16511989 chr2L 16519083 16519128 HMS-Beagle 11 7139 0.5 1.5 1.0 5.5 7184 chr2L 16511944 intron CG5953 - chr2L 16515536 intron CG5953 - chr2L 16519128 intron CG5953 - chr2L_11_16515001 chr2L_16515001 Sg4 411 chr2L 16589794 16589819 chr2L 16589909 16589934 6 115 2.5 4.5 3.5 1.3 140 chr2L 16589794 intron CG42389 + chr2L 16589864 intron CG42389 + chr2L 16589934 intron CG42389 + chr2L_6_16585001 chr2L_16585001 Sg4 412 chr2L 16629475 16629494 chr2L 16629585 16629634 8 136 0.0 1.5 0.8 4.4 159 chr2L 16629475 intron CG42389 + chr2L 16629554 intron CG42389 + chr2L 16629634 intron CG42389 + chr2L_8_16625001 chr2L_16625001 Sg4 413 chr2L 16654683 16654733 chr2L 16654801 16654851 11 116 5.5 3.5 4.5 2.0 168 chr2L 16654683 intron CG42389 + chr2L 16654767 intron CG42389 + chr2L 16654851 intron CG42389 + chr2L_11_16650001 chr2L_16650001 Sg4 414 chr2L 16764946 16764976 chr2L 16765051 16765065 6 102 3.0 2.5 2.8 1.6 119 chr2L 16764946 intergenic not near genes chr2L 16765006 intergenic not near genes chr2L 16765065 intergenic not near genes chr2L_6_16765001 chr2L_16765001 Sg4 415 chr2L 16952660 16952715 chr2L 16952793 16952849 11 134 2.0 1.5 1.8 3.9 189 chr2L 16952660 intergenic not near genes chr2L 16952754 intergenic not near genes chr2L 16952849 intergenic not near genes chr2L_11_16950001 chr2L_16950001 Sg4 416 chr2L 16958083 16958134 chr2L 16962896 16962947 Doc 9 4813 2.0 3.5 2.8 2.4 4864 chr2L 16958083 intergenic not near genes chr2L 16960515 intergenic not near genes chr2L 16962947 intergenic not near genes chr2L_9_16960001 chr2L_16960001 Sg4 417 chr2L 17032477 17032515 chr2L 17032587 17032625 7 109 3.0 4.0 3.5 1.6 148 chr2L 17032477 intergenic not near genes chr2L 17032551 intergenic not near genes chr2L 17032625 intergenic not near genes chr2L_7_17030001 chr2L_17030001 Sg4 418 chr2L 17050026 17050047 chr2L 17050113 17050129 4 98 1.0 2.0 1.5 1.6 103 chr2L 17050026 intergenic not near genes chr2L 17050078 intergenic not near genes chr2L 17050129 intergenic not near genes chr2L_4_17050001 chr2L_17050001 Sg4 419 chr2L 17052385 17052443 chr2L 17052522 17052580 8 137 1.5 4.5 3.0 2.0 195 chr2L 17052385 intergenic not near genes chr2L 17052482 intergenic not near genes chr2L 17052580 intergenic not near genes chr2L_8_17050001 chr2L_17050001 Sg4 420 chr2L 17062732 17062787 chr2L 17062839 17062894 7 107 4.0 3.0 3.5 1.6 162 chr2L 17062732 intergenic not near genes chr2L 17062813 intergenic not near genes chr2L 17062894 intergenic not near genes chr2L_7_17060001 chr2L_17060001 Sg4 421 chr2L 17070169 17070205 chr2L 17070304 17070340 5 135 4.0 3.0 3.5 1.1 171 chr2L 17070169 intergenic not near genes chr2L 17070254 intergenic not near genes chr2L 17070340 intergenic not near genes chr2L_5_17070001 chr2L_17070001 Sg4 422 chr2L 17095819 17095866 chr2L 17095965 17096012 16 145 1.0 3.0 2.0 5.3 193 chr2L 17095819 intergenic not near genes chr2L 17095916 intergenic not near genes chr2L 17096012 intergenic not near genes chr2L_16_17095001 chr2L_17095001 Sg4 423 chr2L 17097794 17097840 chr2L 17097898 17097944 9 104 3.5 1.5 2.5 2.6 150 chr2L 17097794 intergenic not near genes chr2L 17097869 intergenic not near genes chr2L 17097944 intergenic not near genes chr2L_9_17095001 chr2L_17095001 Sg4 424 chr2L 17121819 17121838 chr2L 17121923 17121942 6 104 4.0 6.5 5.2 1.0 123 chr2L 17121819 intergenic not near genes chr2L 17121880 intergenic not near genes chr2L 17121942 intergenic not near genes chr2L_6_17120001 chr2L_17120001 Sg4 425 chr2L 17122749 17122804 chr2L 17122859 17122914 22 110 3.0 4.5 3.8 4.6 165 chr2L 17122749 intergenic not near genes chr2L 17122832 intergenic CG31784 - chr2L 17122914 intergenic CG31784 - chr2L_22_17120001 chr2L_17120001 Sg4 426 chr2L 17164050 17164070 chr2L 17165299 17165342 10 1269 1.0 1.5 1.2 4.5 1292 chr2L 17164050 intron,intron CG34106 +,beat-IIIa + chr2L 17164696 intron,intron CG34106 +,beat-IIIa + chr2L 17165342 intron,intron CG34106 +,beat-IIIa + chr2L_10_17160001 chr2L_17160001 Sg4 427 chr2L 17167541 17167595 chr2L 17167807 17167861 pogo 13 265 3.0 3.5 3.2 3.1 320 chr2L 17167541 intron,intron CG34106 +,beat-IIIa + chr2L 17167701 intron,intron CG34106 +,beat-IIIa + chr2L 17167861 intron,intron CG34106 +,beat-IIIa + chr2L_13_17165001 chr2L_17165001 Sg4 428 chr2L 17199144 17199181 chr2L 17200636 17200673 hobo 4 1492 2.0 0.0 1.0 2.0 1529 chr2L 17199144 intron beat-IIIc - chr2L 17199908 intron beat-IIIc - chr2L 17200673 intron beat-IIIc - chr2L_4_17195001 chr2L_17195001 Sg4 429 chr2L 17273172 17273220 chr2L 17277980 17278028 F-element 16 4808 3.0 4.5 3.8 3.3 4856 chr2L 17273172 intergenic not near genes chr2L 17275600 intergenic not near genes chr2L 17278028 intergenic not near genes chr2L_16_17275001 chr2L_17275001 Sg4 430 chr2L 17332342 17332394 chr2L 17332464 17332516 8 122 3.0 1.5 2.2 2.5 174 chr2L 17332342 intergenic not near genes chr2L 17332429 intergenic not near genes chr2L 17332516 intergenic not near genes chr2L_8_17330001 chr2L_17330001 Sg4 431 chr2L 17359998 17360041 chr2L 17360201 17360244 8 203 3.0 0.0 1.5 3.2 246 chr2L 17359998 intergenic not near genes chr2L 17360121 intergenic not near genes chr2L 17360244 intergenic not near genes chr2L_8_17360001 chr2L_17360001 Sg4 432 chr2L 17403429 17403478 chr2L 17403541 17403590 15 111 2.0 3.5 2.8 3.9 161 chr2L 17403429 intron CLIP-190 + chr2L 17403510 intron CLIP-190 + chr2L 17403590 intron CLIP-190 + chr2L_15_17400001 chr2L_17400001 Sg4 433 chr2L 17424684 17424731 chr2L 17424821 17424867 9 137 1.0 1.5 1.2 4.1 183 chr2L 17424684 intron Dif - chr2L 17424776 intron Dif - chr2L 17424867 intron Dif - chr2L_9_17420001 chr2L_17420001 Sg4 434 chr2L 17425748 17425796 chr2L 17425900 17425943 8 151 1.5 4.5 3.0 2.0 195 chr2L 17425748 intron Dif - chr2L 17425846 intron Dif - chr2L 17425943 intron Dif - chr2L_8_17425001 chr2L_17425001 Sg4 435 chr2L 17432934 17432971 chr2L 17433055 17433092 10 120 5.5 3.0 4.2 1.9 158 chr2L 17432934 5` UTR Dif - chr2L 17433013 5` UTR Dif - chr2L 17433092 5` UTR Dif - chr2L_10_17430001 chr2L_17430001 Sg4 436 chr2L 17564131 17564148 chr2L 17564241 17564258 4 110 0.5 1.0 0.8 2.2 127 chr2L 17564131 intergenic not near genes chr2L 17564194 intergenic not near genes chr2L 17564258 intergenic not near genes chr2L_4_17560001 chr2L_17560001 Sg4 437 chr2L 17571149 17571162 chr2L 17571257 17571270 4 108 0.0 6.0 3.0 1.0 121 chr2L 17571149 intergenic not near genes chr2L 17571210 intergenic not near genes chr2L 17571270 intergenic not near genes chr2L_4_17570001 chr2L_17570001 Sg4 438 chr2L 17579864 17579909 chr2L 17579967 17580011 9 103 2.5 3.0 2.8 2.4 147 chr2L 17579864 5` UTR CR45698 + chr2L 17579938 5` UTR CR45698 + chr2L 17580011 intergenic CR45698 + chr2L_9_17575001 chr2L_17575001 Sg4 439 chr2L 17597768 17597816 chr2L 17597869 17597917 10 100 4.5 3.5 4.0 2.0 149 chr2L 17597768 intron Sytalpha + chr2L 17597842 intron Sytalpha + chr2L 17597917 intron Sytalpha + chr2L_10_17595001 chr2L_17595001 Sg4 440 chr2L 17623648 17623699 chr2L 17623903 17623954 11 255 1.5 4.5 3.0 2.8 306 chr2L 17623648 intergenic not near genes chr2L 17623801 intergenic not near genes chr2L 17623954 intergenic not near genes chr2L_11_17620001 chr2L_17620001 Sg4 441 chr2L 17665963 17666016 chr2L 17666072 17666125 12 109 2.5 0.0 1.2 5.5 162 chr2L 17665963 intron CadN - chr2L 17666044 intron CadN - chr2L 17666125 intron CadN - chr2L_12_17665001 chr2L_17665001 Sg4 442 chr2L 17687491 17687515 chr2L 17692261 17692285 F-element 7 4770 4.5 2.5 3.5 1.6 4794 chr2L 17687491 intron CadN - chr2L 17689888 intron CadN - chr2L 17692285 intron CadN - chr2L_7_17685001 chr2L_17685001 Sg4 443 chr2L 17727844 17727868 chr2L 17729336 17729340 hobo 4 1487 1.5 6.5 4.0 0.8 1496 chr2L 17727844 intron CadN - chr2L 17728592 intron CadN - chr2L 17729340 intron CadN - chr2L_4_17725001 chr2L_17725001 Sg4 444 chr2L 17730963 17730975 chr2L 17731135 17731147 4 172 2.0 7.0 4.5 0.7 184 chr2L 17730963 intron CadN - chr2L 17731055 intron CadN - chr2L 17731147 intron CadN - chr2L_4_17730001 chr2L_17730001 Sg4 445 chr2L 17819899 17819956 chr2L 17825125 17825179 copia 17 5227 2.5 1.5 2.0 5.7 5280 chr2L 17819899 intron CadN2 - chr2L 17822539 intron CadN2 - chr2L 17825179 intron CadN2 - chr2L_17_17820001 chr2L_17820001 Sg4 446 chr2L 17842397 17842437 chr2L 17842595 17842635 11 197 9.0 7.0 8.0 1.2 238 chr2L 17842397 intron CadN2 - chr2L 17842516 intron CadN2 - chr2L 17842635 intron CadN2 - chr2L_11_17840001 chr2L_17840001 Sg4 447 chr2L 17842664 17842678 chr2L 17842915 17842929 5 251 9.0 10.5 9.8 0.5 265 chr2L 17842664 intron CadN2 - chr2L 17842796 intron CadN2 - chr2L 17842929 intron CadN2 - chr2L_5_17840001 chr2L_17840001 Sg4 448 chr2L 17855475 17855511 chr2L 17855578 17855614 13 102 7.0 3.5 5.2 2.1 139 chr2L 17855475 intron CadN2 - chr2L 17855544 intron CadN2 - chr2L 17855614 intron CadN2 - chr2L_13_17855001 chr2L_17855001 Sg4 449 chr2L 17879977 17880031 chr2L 17880084 17880143 10 111 0.5 2.5 1.5 4.0 166 chr2L 17879977 intergenic not near genes chr2L 17880060 intergenic not near genes chr2L 17880143 intergenic not near genes chr2L_10_17880001 chr2L_17880001 Sg4 450 chr2L 17880575 17880614 chr2L 17880712 17880751 7 137 5.0 4.5 4.8 1.2 176 chr2L 17880575 intergenic not near genes chr2L 17880663 intergenic not near genes chr2L 17880751 intergenic not near genes chr2L_7_17880001 chr2L_17880001 Sg4 451 chr2L 17911938 17911988 chr2L 17914143 17914199 pogo 18 2210 5.0 4.5 4.8 3.1 2261 chr2L 17911938 intergenic not near genes chr2L 17913068 intergenic not near genes chr2L 17914199 intergenic CG43271 - chr2L_18_17910001 chr2L_17910001 Sg4 452 chr2L 17931376 17931415 chr2L 17931564 17931607 14 199 3.0 3.5 3.2 3.3 231 chr2L 17931376 intergenic not near genes chr2L 17931492 intergenic not near genes chr2L 17931607 intergenic not near genes chr2L_14_17930001 chr2L_17930001 Sg4 453 chr2L 17935401 17935442 chr2L 17935522 17935563 7 121 1.0 1.5 1.2 3.2 162 chr2L 17935401 intergenic not near genes chr2L 17935482 intergenic not near genes chr2L 17935563 intergenic not near genes chr2L_7_17935001 chr2L_17935001 Sg4 454 chr2L 17951927 17951970 chr2L 17953419 17953462 hobo 9 1492 2.0 2.5 2.2 2.8 1535 chr2L 17951927 intergenic CR44398 -,CR44397 - chr2L 17952694 intergenic not near genes chr2L 17953462 intergenic not near genes chr2L_9_17950001 chr2L_17950001 Sg4 455 chr2L 17987214 17987248 chr2L 17992421 17992455 6 5207 18.5 14.0 16.2 0.3 5241 chr2L 17987214 exon CG5681 + chr2L 17989834 intergenic not near genes chr2L 17992455 intergenic not near genes chr2L_6_17985001 chr2L_17985001 Sg4 456 chr2L 18051868 18051894 chr2L 18061040 18061065 roo 7 9172 6.5 7.0 6.8 0.9 9197 chr2L 18051868 intron rdo + chr2L 18056466 intron rdo + chr2L 18061065 intron rdo + chr2L_7_18055001 chr2L_18055001 Sg4 457 chr2L 18095568 18095590 chr2L 18095672 18095696 7 106 4.0 1.5 2.8 1.8 128 chr2L 18095568 intergenic not near genes chr2L 18095632 intergenic not near genes chr2L 18095696 intergenic not near genes chr2L_7_18095001 chr2L_18095001 Sg4 458 chr2L 18111217 18111237 chr2L 18111333 18111353 9 115 10.0 5.5 7.8 1.0 136 chr2L 18111217 intergenic not near genes chr2L 18111285 intergenic not near genes chr2L 18111353 intergenic not near genes chr2L_9_18110001 chr2L_18110001 Sg4 459 chr2L 18263071 18263120 chr2L 18263191 18263240 17 119 4.5 1.5 3.0 4.2 169 chr2L 18263071 intron CG42750 - chr2L 18263156 intron CG42750 - chr2L 18263240 intron CG42750 - chr2L_17_18260001 chr2L_18260001 Sg4 460 chr2L 18285966 18286020 chr2L 18286622 18286676 8 651 2.5 2.0 2.2 2.5 710 chr2L 18285966 intergenic CG31787 - chr2L 18286321 intergenic not near genes chr2L 18286676 intergenic not near genes chr2L_8_18285001 chr2L_18285001 Sg4 461 chr2L 18307878 18307913 chr2L 18307980 18308015 5 102 0.5 4.5 2.5 1.4 137 chr2L 18307878 intergenic CR43353 - chr2L 18307946 intergenic CR43353 - chr2L 18308015 intergenic CR43353 - chr2L_5_18305001 chr2L_18305001 Sg4 462 chr2L 18331037 18331088 chr2L 18331181 18331232 7 142 0.5 3.0 1.8 2.5 195 chr2L 18331037 intron Fas3 + chr2L 18331134 intron Fas3 + chr2L 18331232 intron Fas3 + chr2L_7_18330001 chr2L_18330001 Sg4 463 chr2L 18408006 18408050 chr2L 18412815 18412859 Doc 8 4809 8.5 5.5 7.0 1.0 4853 chr2L 18408006 intergenic not near genes chr2L 18410432 intergenic not near genes chr2L 18412859 intergenic not near genes chr2L_8_18410001 chr2L_18410001 Sg4 464 chr2L 18449465 18449517 chr2L 18449577 18449629 12 111 1.0 6.5 3.8 2.5 164 chr2L 18449465 intergenic bsf - chr2L 18449547 3` UTR bsf - chr2L 18449629 3` UTR bsf - chr2L_12_18445001 chr2L_18445001 Sg4 465 chr2L 18552029 18552089 chr2L 18552134 18552192 7 105 1.5 3.5 2.5 2.0 163 chr2L 18552029 intron Pde11 - chr2L 18552110 intron Pde11 - chr2L 18552192 intron Pde11 - chr2L_7_18550001 chr2L_18550001 Sg4 466 chr2L 18584756 18584775 chr2L 18584861 18584885 5 109 1.0 8.5 4.8 0.9 129 chr2L 18584756 intron Pde11 - chr2L 18584820 intron Pde11 - chr2L 18584885 intron Pde11 - chr2L_5_18580001 chr2L_18580001 Sg4 467 chr2L 16217660 16217660 chr2L 18622718 18622719 5 2405058 19.5 20.5 20.0 0.2 2405059 chr2L 16217660 intergenic not near genes chr2L 17420190 intron Dif - chr2L 18622719 intron MESR3 + chr2L_5_17420001 chr2L_17420001 Sg4 468 chr2L 18629344 18629401 chr2L 18629454 18629501 21 109 6.5 2.0 4.2 4.0 157 chr2L 18629344 intron MESR3 + chr2L 18629422 intron MESR3 + chr2L 18629501 intron MESR3 + chr2L_21_18625001 chr2L_18625001 Sg4 469 chr2L 18665139 18665178 chr2L 18677253 18677292 8 12114 35.5 18.5 27.0 0.3 12153 chr2L 18665139 intergenic not near genes chr2L 18671216 5` UTR CG43338 - chr2L 18677292 5` UTR CG31751 + chr2L_8_18670001 chr2L_18670001 Sg4 470 chr2L 18758862 18758910 chr2L 18758967 18759015 19 104 4.0 4.5 4.2 3.7 153 chr2L 18758862 intergenic not near genes chr2L 18758938 intergenic not near genes chr2L 18759015 intergenic not near genes chr2L_19_18755001 chr2L_18755001 Sg4 471 chr2L 18811412 18811438 chr2L 18811519 18811545 4 107 5.0 0.5 2.8 1.1 133 chr2L 18811412 intergenic CG10570 -,CG42502 - chr2L 18811478 intergenic CG10570 -,CG42502 - chr2L 18811545 intergenic not near genes chr2L_4_18810001 chr2L_18810001 Sg4 472 chr2L 18812540 18812578 chr2L 18812828 18812866 8 288 1.0 3.5 2.2 2.5 326 chr2L 18812540 intergenic CG17325 +,CG42305 + chr2L 18812703 5` UTR,5` UTR CG17325 +,CG42305 + chr2L 18812866 5` UTR,5` UTR CG17325 +,CG42305 + chr2L_8_18810001 chr2L_18810001 Sg4 473 chr2L 18883831 18883884 chr2L 18883936 18883991 19 107 3.5 3.5 3.5 4.2 160 chr2L 18883831 intergenic not near genes chr2L 18883911 intergenic not near genes chr2L 18883991 intergenic not near genes chr2L_19_18880001 chr2L_18880001 Sg4 474 chr2L 18902598 18902657 chr2L 18902904 18902963 11 306 2.0 1.0 1.5 4.4 365 chr2L 18902598 intergenic not near genes chr2L 18902780 intergenic not near genes chr2L 18902963 intergenic not near genes chr2L_11_18900001 chr2L_18900001 Sg4 475 chr2L 18981367 18981418 chr2L 18981475 18981525 18 107 3.0 4.0 3.5 4.0 158 chr2L 18981367 intron Swip-1 - chr2L 18981446 intron Swip-1 - chr2L 18981525 intron Swip-1 - chr2L_18_18980001 chr2L_18980001 Sg4 476 chr2L 18991054 18991104 chr2L 18992959 18993009 17 1904 5.0 4.0 4.5 3.1 1955 chr2L 18991054 5` UTR CG15169 + chr2L 18992032 exon CG15169 + chr2L 18993009 intergenic CG10650 - chr2L_17_18990001 chr2L_18990001 Sg4 477 chr2L 19147352 19147392 chr2L 19154412 19154452 297 4 7057 5.5 7.0 6.2 0.6 7100 chr2L 19147352 intron brat + chr2L 19150902 intron brat + chr2L 19154452 intron brat + chr2L_4_19150001 chr2L_19150001 Sg4 478 chr2L 19165095 19165139 chr2L 19165202 19165246 12 107 2.0 1.5 1.8 4.3 151 chr2L 19165095 intron brat + chr2L 19165170 intron brat + chr2L 19165246 intron brat + chr2L_12_19165001 chr2L_19165001 Sg4 479 chr2L 19193285 19193331 chr2L 19193839 19193885 5 554 25.0 20.0 22.5 0.2 600 chr2L 19193285 intron drl + chr2L 19193585 intron drl + chr2L 19193885 intron drl + chr2L_5_19190001 chr2L_19190001 Sg4 480 chr2L 19331641 19331696 chr2L 19331745 19331800 13 100 3.5 4.0 3.8 2.7 159 chr2L 19331641 intergenic not near genes chr2L 19331720 intergenic not near genes chr2L 19331800 intergenic not near genes chr2L_13_19330001 chr2L_19330001 Sg4 481 chr2L 19345007 19345040 chr2L 19357241 19357274 blood 7 12233 1.0 7.0 4.0 1.4 12267 chr2L 19345007 intron dnt - chr2L 19351140 intron dnt - chr2L 19357274 intron dnt - chr2L_7_19350001 chr2L_19350001 Sg4 482 chr2L 19357529 19357569 chr2L 19357639 19357683 10 113 2.5 7.5 5.0 1.7 154 chr2L 19357529 intron dnt - chr2L 19357606 intron dnt - chr2L 19357683 intron dnt - chr2L_10_19355001 chr2L_19355001 Sg4 483 chr2L 19401790 19401841 chr2L 19401898 19401948 8 108 0.5 1.0 0.8 4.4 158 chr2L 19401790 intron Pax - chr2L 19401869 intron Pax - chr2L 19401948 intron Pax - chr2L_8_19400001 chr2L_19400001 Sg4 484 chr2L 19437498 19437523 chr2L 19437614 19437640 10 117 5.5 4.5 5.0 1.7 142 chr2L 19437498 intron CG10237 - chr2L 19437569 intron CG10237 - chr2L 19437640 intron CG10237 - chr2L_10_19435001 chr2L_19435001 Sg4 485 chr2L 19563705 19563732 chr2L 19564313 19564335 6 607 6.5 8.5 7.5 0.7 630 chr2L 19563705 intergenic CG13078 + chr2L 19564020 intron CG13078 + chr2L 19564335 5` UTR CG13078 + chr2L_6_19560001 chr2L_19560001 Sg4 486 chr2L 19601548 19601597 chr2L 19601650 19601699 11 101 1.5 0.5 1.0 5.5 151 chr2L 19601548 intron,intron Lar +,CR44978 - chr2L 19601624 intron,intron Lar +,CR44978 - chr2L 19601699 intron,intron Lar +,CR44978 - chr2L_11_19600001 chr2L_19600001 Sg4 487 chr2L 19620073 19620124 chr2L 19621087 19621138 jockey 15 1012 6.5 3.0 4.8 2.6 1065 chr2L 19620073 intron Lar + chr2L 19620606 intron Lar + chr2L 19621138 intron Lar + chr2L_15_19620001 chr2L_19620001 Sg4 488 chr2L 19652543 19652599 chr2L 19674004 19674054 opus 11 21456 1.0 4.0 2.5 3.1 21511 chr2L 19652543 intron Lar + chr2L 19663298 intron Lar + chr2L 19674054 intron Lar + chr2L_11_19660001 chr2L_19660001 Sg4 489 chr2L 19683202 19683259 chr2L 19683305 19683351 21 100 4.0 3.5 3.8 4.4 149 chr2L 19683202 intron Lar + chr2L 19683276 intron Lar + chr2L 19683351 intron Lar + chr2L_21_19680001 chr2L_19680001 Sg4 490 chr2L 19688370 19688396 chr2L 19688893 19688919 4 523 15.0 3.5 9.2 0.4 549 chr2L 19688370 intron Lar + chr2L 19688644 intron Lar + chr2L 19688919 intron Lar + chr2L_4_19685001 chr2L_19685001 Sg4 491 chr2L 19696516 19696567 chr2L 19696642 19696693 7 124 3.5 2.5 3.0 1.8 177 chr2L 19696516 intron Lar + chr2L 19696604 intron Lar + chr2L 19696693 intron Lar + chr2L_7_19695001 chr2L_19695001 Sg4 492 chr2L 19703519 19703568 chr2L 19712680 19712728 roo 12 9157 5.5 2.5 4.0 2.4 9209 chr2L 19703519 intron Lar + chr2L 19708124 intron Lar + chr2L 19712728 intron Lar + chr2L_12_19705001 chr2L_19705001 Sg4 493 chr2L 19737353 19737387 chr2L 19740837 19740841 1360 14 3486 3.0 6.0 4.5 2.5 3488 chr2L 19737353 intergenic Nf-YB + chr2L 19739097 intergenic not near genes chr2L 19740841 intergenic not near genes chr2L_14_19735001 chr2L_19735001 Sg4 494 chr2L 19762782 19762837 chr2L 19763049 19763104 pogo 10 266 7.0 2.5 4.8 1.7 322 chr2L 19762782 exon fbp - chr2L 19762943 intron fbp - chr2L 19763104 intron fbp - chr2L_10_19760001 chr2L_19760001 Sg4 495 chr2L 19773142 19773186 chr2L 19773254 19773298 16 111 2.5 2.5 2.5 4.6 156 chr2L 19773142 intergenic not near genes chr2L 19773220 intergenic not near genes chr2L 19773298 intergenic not near genes chr2L_16_19770001 chr2L_19770001 Sg4 496 chr2L 19776642 19776660 chr2L 19776747 19776765 9 105 4.5 3.0 3.8 1.9 123 chr2L 19776642 3` UTR CdGAPr - chr2L 19776704 3` UTR CdGAPr - chr2L 19776765 3` UTR CdGAPr - chr2L_9_19775001 chr2L_19775001 Sg4 497 chr2L 19824410 19824424 chr2L 19824518 19824531 5 108 2.5 4.5 3.5 1.1 121 chr2L 19824410 intron sick + chr2L 19824470 intron sick + chr2L 19824531 intron sick + chr2L_5_19820001 chr2L_19820001 Sg4 498 chr2L 19837254 19837299 chr2L 19837359 19837404 12 105 5.5 4.5 5.0 2.0 150 chr2L 19837254 intron sick + chr2L 19837329 intron sick + chr2L 19837404 intron sick + chr2L_12_19835001 chr2L_19835001 Sg4 499 chr2L 19846236 19846273 chr2L 19846342 19846379 8 106 0.5 8.0 4.2 1.5 143 chr2L 19846236 intron sick + chr2L 19846308 intron sick + chr2L 19846379 intron sick + chr2L_8_19845001 chr2L_19845001 Sg4 500 chr2L 19901465 19901507 chr2L 19901593 19901635 8 128 2.5 4.0 3.2 1.9 170 chr2L 19901465 intron sick + chr2L 19901550 intron sick + chr2L 19901635 intron sick + chr2L_8_19900001 chr2L_19900001 Sg4 501 chr2L 19911264 19911322 chr2L 19911377 19911435 25 113 5.5 7.5 6.5 3.3 171 chr2L 19911264 intron,3` UTR sick +,CR43097 - chr2L 19911350 intron,3` UTR sick +,CR43097 - chr2L 19911435 intron,3` UTR sick +,CR43097 - chr2L_25_19910001 chr2L_19910001 Sg4 502 chr2L 20005850 20005902 chr2L 20010951 20011003 flea 12 5101 1.5 4.0 2.8 3.2 5153 chr2L 20005850 intron CG43861 - chr2L 20008426 intron CG43861 - chr2L 20011003 intron CG43861 - chr2L_12_20005001 chr2L_20005001 Sg4 503 chr2L 20035658 20035697 chr2L 20035910 20035939 8 251 1.5 6.5 4.0 1.6 281 chr2L 20035658 intron sNPF + chr2L 20035798 intron sNPF + chr2L 20035939 intron sNPF + chr2L_8_20035001 chr2L_20035001 Sg4 504 chr2L 20036510 20036555 chr2L 20036619 20036664 5 109 2.0 2.5 2.2 1.6 154 chr2L 20036510 intron sNPF + chr2L 20036587 intron sNPF + chr2L 20036664 intron sNPF + chr2L_5_20035001 chr2L_20035001 Sg4 505 chr2L 20069522 20069552 chr2L 20069608 20069657 9 100 4.5 2.0 3.2 2.1 135 chr2L 20069522 intron bwa + chr2L 20069590 intron bwa + chr2L 20069657 intron bwa + chr2L_9_20065001 chr2L_20065001 Sg4 506 chr2L 20079500 20079545 chr2L 20079646 20079691 5 146 2.5 1.0 1.8 1.8 191 chr2L 20079500 intron,intron neb +,fok - chr2L 20079596 intron,intron neb +,fok - chr2L 20079691 intron,intron neb +,fok - chr2L_5_20075001 chr2L_20075001 Sg4 507 chr2L 20124307 20124360 chr2L 20124410 20124463 4 103 1.5 2.5 2.0 1.3 156 chr2L 20124307 intergenic not near genes chr2L 20124385 intergenic not near genes chr2L 20124463 intergenic not near genes chr2L_4_20120001 chr2L_20120001 Sg4 508 chr2L 20246721 20246746 chr2L 20246833 20246858 8 110 12.0 2.0 7.0 1.0 137 chr2L 20246721 intergenic not near genes chr2L 20246790 intergenic not near genes chr2L 20246858 intergenic not near genes chr2L_8_20245001 chr2L_20245001 Sg4 509 chr2L 20271237 20271270 chr2L 20271345 20271378 5 107 4.0 4.5 4.2 1.0 141 chr2L 20271237 intergenic not near genes chr2L 20271308 intergenic not near genes chr2L 20271378 intergenic not near genes chr2L_5_20270001 chr2L_20270001 Sg4 510 chr2L 20272095 20272142 chr2L 20282831 20282878 copia 10 10736 2.5 4.0 3.2 2.4 10783 chr2L 20272095 intergenic not near genes chr2L 20277486 intergenic not near genes chr2L 20282878 intergenic not near genes chr2L_10_20275001 chr2L_20275001 Sg4 511 chr2L 20296499 20296539 chr2L 20296605 20296645 7 106 1.5 3.0 2.2 2.2 146 chr2L 20296499 intergenic CR43414 - chr2L 20296572 intergenic CR43414 - chr2L 20296645 3` UTR CR43414 - chr2L_7_20295001 chr2L_20295001 Sg4 512 chr2L 20299399 20299445 chr2L 20299547 20299593 15 143 0.0 7.5 3.8 3.1 194 chr2L 20299399 intergenic not near genes chr2L 20299496 intergenic not near genes chr2L 20299593 intergenic not near genes chr2L_15_20295001 chr2L_20295001 Sg4 513 chr2L 20299975 20300014 chr2L 20300088 20300096 9 102 8.5 2.0 5.2 1.5 121 chr2L 20299975 intergenic not near genes chr2L 20300036 intergenic not near genes chr2L 20300096 intergenic not near genes chr2L_9_20300001 chr2L_20300001 Sg4 514 chr2L 20302249 20302304 chr2L 20311728 20311776 blood 7 9477 4.5 6.5 5.5 1.1 9527 chr2L 20302249 intergenic not near genes chr2L 20307012 intergenic not near genes chr2L 20311776 5` UTR spir + chr2L_7_20305001 chr2L_20305001 Sg4 515 chr2L 20336053 20336086 chr2L 20336163 20336196 15 110 7.0 2.0 4.5 2.7 143 chr2L 20336053 intron spir + chr2L 20336124 intron spir + chr2L 20336196 intron spir + chr2L_15_20335001 chr2L_20335001 Sg4 516 chr2L 20344806 20344854 chr2L 20344907 20344955 7 101 0.5 3.0 1.8 2.5 149 chr2L 20344806 intron spir + chr2L 20344880 intron spir + chr2L 20344955 intron spir + chr2L_7_20340001 chr2L_20340001 Sg4 517 chr2L 20420105 20420144 chr2L 20420207 20420231 8 99 2.0 4.0 3.0 2.0 126 chr2L 20420105 intron Arpc2 + chr2L 20420168 intron Arpc2 + chr2L 20420231 intron Arpc2 + chr2L_8_20420001 chr2L_20420001 Sg4 518 chr2L 20429650 20429658 chr2L 20429789 20429797 4 138 6.0 1.5 3.8 0.8 147 chr2L 20429650 intron CG31688 + chr2L 20429724 intron CG31688 + chr2L 20429797 intron CG31688 + chr2L_4_20425001 chr2L_20425001 Sg4 519 chr2L 20480524 20480551 chr2L 20480672 20480699 4 148 3.5 2.0 2.8 1.1 175 chr2L 20480524 intron CR44980 - chr2L 20480612 intron CR44980 - chr2L 20480699 intron CR44980 - chr2L_4_20480001 chr2L_20480001 Sg4 520 chr2L 20498674 20498708 chr2L 20498798 20498832 7 124 5.5 5.0 5.2 1.1 158 chr2L 20498674 intergenic not near genes chr2L 20498753 intergenic not near genes chr2L 20498832 intergenic not near genes chr2L_7_20495001 chr2L_20495001 Sg4 521 chr2L 20530746 20530794 chr2L 20530910 20530952 9 160 1.5 2.0 1.8 3.2 206 chr2L 20530746 intergenic CG44270 + chr2L 20530849 intergenic CG44270 + chr2L 20530952 intergenic CG44270 + chr2L_9_20530001 chr2L_20530001 Sg4 522 chr2L 20568655 20568687 chr2L 20569070 20569091 X-element 7 413 4.0 10.0 7.0 0.9 436 chr2L 20568655 intron CR45347 + chr2L 20568873 intron CR45347 + chr2L 20569091 intron CR45347 + chr2L_7_20565001 chr2L_20565001 Sg4 523 chr2L 20576216 20576239 chr2L 20583710 20583733 blood 4 7494 1.0 6.5 3.8 0.8 7517 chr2L 20576216 intergenic CR45347 + chr2L 20579974 intergenic not near genes chr2L 20583733 3` UTR CR44909 - chr2L_4_20575001 chr2L_20575001 Sg4 524 chr2L 20601760 20601813 chr2L 20601863 20601916 10 103 2.0 0.5 1.2 4.5 156 chr2L 20601760 intron CR44909 - chr2L 20601838 intron CR44909 - chr2L 20601916 intron CR44909 - chr2L_10_20600001 chr2L_20600001 Sg4 525 chr2L 20611203 20611263 chr2L 20611320 20611352 8 110 0.0 2.0 1.0 4.0 149 chr2L 20611203 intron CR44909 - chr2L 20611278 intron CR44909 - chr2L 20611352 intron CR44909 - chr2L_8_20610001 chr2L_20610001 Sg4 526 chr2L 20639490 20639532 chr2L 20639791 20639833 INE-1 9 301 4.0 5.5 4.8 1.6 343 chr2L 20639490 intergenic not near genes chr2L 20639662 intergenic CG31680 + chr2L 20639833 intergenic CG31680 + chr2L_9_20635001 chr2L_20635001 Sg4 527 chr2L 20643322 20643333 chr2L 20643479 20643490 5 157 2.5 4.0 3.2 1.2 168 chr2L 20643322 intergenic phr6-4 -,CG17470 - chr2L 20643406 3` UTR phr6-4 - chr2L 20643490 3` UTR phr6-4 - chr2L_5_20640001 chr2L_20640001 Sg4 528 chr2L 20668669 20668715 chr2L 20668770 20668816 15 100 4.5 3.5 4.0 3.0 147 chr2L 20668669 intron CG31678 - chr2L 20668742 intron CG31678 - chr2L 20668816 intron CG31678 - chr2L_15_20665001 chr2L_20665001 Sg4 529 chr2L 20695774 20695829 chr2L 20695882 20695940 11 112 5.0 3.0 4.0 2.2 166 chr2L 20695774 intron Hr38 - chr2L 20695857 intron Hr38 - chr2L 20695940 intron Hr38 - chr2L_11_20695001 chr2L_20695001 Sg4 530 chr2L 20801656 20801665 chr2L 20801760 20801762 6 102 4.0 0.0 2.0 2.0 106 chr2L 20801656 intron CG9328 + chr2L 20801709 intron CG9328 + chr2L 20801762 intron CG9328 + chr2L_6_20800001 chr2L_20800001 Sg4 531 chr2L 20801670 20801676 chr2L 20801759 20801780 5 98 3.0 0.0 1.5 2.0 110 chr2L 20801670 intron CG9328 + chr2L 20801725 intron CG9328 + chr2L 20801780 intron CG9328 + chr2L_5_20800001 chr2L_20800001 Sg4 532 chr2L 20835791 20835840 chr2L 20836533 20836582 Quasimodo 10 742 1.0 4.5 2.8 2.6 791 chr2L 20835791 5` UTR Oseg5 - chr2L 20836186 intergenic Oseg5 -,Spn38F - chr2L 20836582 intergenic Spn38F - chr2L_10_20835001 chr2L_20835001 Sg4 533 chr2L 20840004 20840056 chr2L 20840241 20840293 8 236 5.0 3.5 4.2 1.5 289 chr2L 20840004 intergenic not near genes chr2L 20840148 intergenic not near genes chr2L 20840293 intergenic CG31676 + chr2L_8_20840001 chr2L_20840001 Sg4 534 chr2L 20846737 20846789 chr2L 20846846 20846876 10 104 5.0 1.0 3.0 2.5 139 chr2L 20846737 intron CG31676 + chr2L 20846806 intron CG31676 + chr2L 20846876 intron CG31676 + chr2L_10_20845001 chr2L_20845001 Sg4 535 chr2L 20881871 20881914 chr2L 20881983 20882031 15 114 4.0 9.0 6.5 2.0 160 chr2L 20881871 intron,intron CG43739 -,sky - chr2L 20881951 intron,intron CG43739 -,sky - chr2L 20882031 3` UTR,exon CG43739 -,sky - chr2L_15_20880001 chr2L_20880001 Sg4 536 chr2L 20891525 20891545 chr2L 20896651 20896671 jockey 6 5126 3.5 3.5 3.5 1.3 5146 chr2L 20891525 intron,intron CG43739 -,sky - chr2L 20894098 intron,intron CG43739 -,sky - chr2L 20896671 intron,intron CG43739 -,sky - chr2L_6_20890001 chr2L_20890001 Sg4 537 chr2L 20901428 20901439 chr2L 20902617 20902628 1360 5 1189 12.0 2.5 7.2 0.6 1200 chr2L 20901428 intron,intron CG43739 -,sky - chr2L 20902028 intron,intron CG43739 -,sky - chr2L 20902628 intron,intron CG43739 -,sky - chr2L_5_20900001 chr2L_20900001 Sg4 538 chr2L 20911006 20911059 chr2L 20911107 20911160 16 99 9.0 2.5 5.8 2.4 154 chr2L 20911006 intron,intron CG43739 -,sky - chr2L 20911083 intron,intron CG43739 -,sky - chr2L 20911160 intron,intron CG43739 -,sky - chr2L_16_20910001 chr2L_20910001 Sg4 539 chr2L 19505799 19505833 chr2L 20914118 20914152 1360 10 1408321 29.5 14.0 21.8 0.4 1408353 chr2L 19505799 exon CG10188 - chr2L 20209976 intergenic not near genes chr2L 20914152 intron,intron CG43739 -,sky - chr2L_10_20205001 chr2L_20205001 Sg4 540 chr2L 20946927 20946953 chr2L 20947034 20947051 4 104 4.0 5.0 4.5 0.7 124 chr2L 20946927 intergenic CR44606 - chr2L 20946989 intergenic CR44606 - chr2L 20947051 intergenic CR44606 - chr2L_4_20945001 chr2L_20945001 Sg4 541 chr2L 20964710 20964736 chr2L 20965189 20965213 5 477 9.0 11.5 10.2 0.4 503 chr2L 20964710 intergenic not near genes chr2L 20964962 intergenic not near genes chr2L 20965213 intergenic CG42238 - chr2L_5_20960001 chr2L_20960001 Sg4 542 chr2L 20967061 20967106 chr2L 20967172 20967217 11 110 1.5 3.0 2.2 3.4 156 chr2L 20967061 3` UTR CG42238 - chr2L 20967139 3` UTR CG42238 - chr2L 20967217 3` UTR CG42238 - chr2L_11_20965001 chr2L_20965001 Sg4 543 chr2L 20976638 20976666 chr2L 20981478 20981506 X-element 5 4840 1.5 4.5 3.0 1.2 4868 chr2L 20976638 intron CG42238 - chr2L 20979072 intron CG42238 - chr2L 20981506 intron CG42238 - chr2L_5_20975001 chr2L_20975001 Sg4 544 chr2L 20991014 20991065 chr2L 20991117 20991168 17 103 2.5 2.5 2.5 4.9 154 chr2L 20991014 intron CG42238 - chr2L 20991091 intron CG42238 - chr2L 20991168 intron CG42238 - chr2L_17_20990001 chr2L_20990001 Sg4 545 chr2L 21020252 21020299 chr2L 21023954 21024001 NOF 8 3701 3.5 5.5 4.5 1.5 3749 chr2L 21020252 intron CG42238 - chr2L 21022126 intron CG42238 - chr2L 21024001 intron CG42238 - chr2L_8_21020001 chr2L_21020001 Sg4 546 chr2L 21041112 21041157 chr2L 21049398 21049422 Tirant 9 8284 3.0 2.5 2.8 2.4 8310 chr2L 21041112 intron CG42238 - chr2L 21045267 intron CG42238 - chr2L 21049422 intron CG42238 - chr2L_9_21045001 chr2L_21045001 Sg4 547 chr2L 21074909 21074951 chr2L 21075025 21075067 5 116 2.0 3.5 2.8 1.3 158 chr2L 21074909 intergenic tadr + chr2L 21074988 intergenic tadr + chr2L 21075067 intergenic tadr + chr2L_5_21070001 chr2L_21070001 Sg4 548 chr2L 21086417 21086455 chr2L 21086557 21086595 8 140 1.5 5.0 3.2 1.9 178 chr2L 21086417 5` UTR CG33509 - chr2L 21086506 5` UTR CG33509 - chr2L 21086595 intergenic CG33509 -,ppk13 - chr2L_8_21085001 chr2L_21085001 Sg4 549 chr2L 21088895 21088947 chr2L 21089003 21089055 4 108 1.0 2.5 1.8 1.4 160 chr2L 21088895 intergenic ppk13 -,CG9259 + chr2L 21088975 intergenic ppk13 -,CG9259 + chr2L 21089055 intergenic ppk13 -,CG9259 + chr2L_4_21085001 chr2L_21085001 Sg4 550 chr2L 21158855 21158906 chr2L 21158957 21159008 14 102 5.0 3.5 4.2 2.7 153 chr2L 21158855 intergenic CG9248 +,CG9249 - chr2L 21158932 5` UTR CG9248 + chr2L 21159008 5` UTR CG9248 + chr2L_14_21155001 chr2L_21155001 Sg4 551 chr2L 21245259 21245306 chr2L 21245520 21245552 11 264 0.0 7.0 3.5 2.4 293 chr2L 21245259 intron Hr39 + chr2L 21245406 intron Hr39 + chr2L 21245552 intron Hr39 + chr2L_11_21245001 chr2L_21245001 Sg4 552 chr2L 21286584 21286617 chr2L 21286687 21286720 4 102 6.0 1.0 3.5 0.9 136 chr2L 21286584 exon Mio - chr2L 21286652 intron Mio - chr2L 21286720 intron Mio - chr2L_4_21285001 chr2L_21285001 Sg4 553 chr2L 21347527 21347578 chr2L 21355024 21355074 blood 11 7497 2.5 1.5 2.0 3.7 7547 chr2L 21347527 intron Tsp39D + chr2L 21351300 intron Tsp39D + chr2L 21355074 intron Tsp39D + chr2L_11_21350001 chr2L_21350001 Sg4 554 chr2L 21392191 21392231 chr2L 21392302 21392341 5 110 2.0 3.0 2.5 1.4 150 chr2L 21392191 3` UTR nrv3 + chr2L 21392266 3` UTR nrv3 + chr2L 21392341 3` UTR nrv3 + chr2L_5_21390001 chr2L_21390001 Sg4 555 chr2L 21597031 21597043 chr2L 21604800 21604812 roo 4 7768 6.5 4.0 5.2 0.6 7781 chr2L 21597031 intergenic not near genes chr2L 21600922 intergenic not near genes chr2L 21604812 intergenic not near genes chr2L_4_21600001 chr2L_21600001 Sg4 556 chr2L 21691808 21691840 chr2L 21698303 21698305 Burdock 4 6488 2.5 1.0 1.8 1.4 6497 chr2L 21691808 intron CG31619 + chr2L 21695056 intron CG31619 + chr2L 21698305 intron CG31619 + chr2L_4_21695001 chr2L_21695001 Sg4 557 chr2L 21750077 21750128 chr2L 21750422 21750476 9 345 1.5 2.5 2.0 3.0 399 chr2L 21750077 intron step - chr2L 21750276 intron step - chr2L 21750476 intron step - chr2L_9_21750001 chr2L_21750001 Sg4 558 chr2L 21754642 21754679 chr2L 21754748 21754785 8 106 2.0 2.5 2.2 2.5 143 chr2L 21754642 intron step - chr2L 21754714 intron step - chr2L 21754785 intron step - chr2L_8_21750001 chr2L_21750001 Sg4 559 chr2L 21771959 21772000 chr2L 21772063 21772104 7 104 4.5 3.0 3.8 1.5 145 chr2L 21771959 intron CG31612 - chr2L 21772032 intron CG31612 - chr2L 21772104 intron CG31612 - chr2L_7_21770001 chr2L_21770001 Sg4 560 chr2L 21819311 21819359 chr2L 21819424 21819472 11 111 3.0 4.0 3.5 2.4 161 chr2L 21819311 intergenic CR44786 + chr2L 21819392 intergenic CR44786 + chr2L 21819472 intergenic CR44786 + chr2L_11_21815001 chr2L_21815001 Sg4 561 chr2L 21824107 21824153 chr2L 21824214 21824265 7 111 0.0 0.5 0.2 5.8 158 chr2L 21824107 intergenic not near genes chr2L 21824186 intergenic not near genes chr2L 21824265 intergenic not near genes chr2L_7_21820001 chr2L_21820001 Sg4 562 chr2L 21869067 21869082 chr2L 21869181 21869189 4 111 15.5 10.0 12.8 0.3 122 chr2L 21869067 5` UTR CR44917 + chr2L 21869128 5` UTR CR44917 + chr2L 21869189 5` UTR CR44917 + chr2L_4_21865001 chr2L_21865001 Sg4 563 chr2L 21869086 21869104 chr2L 21869179 21869212 5 106 10.0 9.5 9.8 0.5 126 chr2L 21869086 5` UTR CR44917 + chr2L 21869149 5` UTR CR44917 + chr2L 21869212 5` UTR CR44917 + chr2L_5_21865001 chr2L_21865001 Sg4 564 chr2L 21953794 21953816 chr2L 21954680 21954693 6 882 26.0 35.0 30.5 0.2 899 chr2L 21953794 intergenic not near genes chr2L 21954244 intergenic not near genes chr2L 21954693 intergenic not near genes chr2L_6_21950001 chr2L_21950001 Sg4 565 chr2L 21953793 21953830 chr2L 21954694 21954706 8 885 29.5 32.5 31.0 0.2 913 chr2L 21953793 intergenic not near genes chr2L 21954250 intergenic not near genes chr2L 21954706 intergenic not near genes chr2L_8_21950001 chr2L_21950001 Sg4 566 chr2L 21981667 21981704 chr2L 21990857 21990884 roo 8 9189 2.5 4.0 3.2 1.9 9217 chr2L 21981667 exon CG2528 - chr2L 21986276 intron CG2528 - chr2L 21990884 exon CG2528 - chr2L_8_21985001 chr2L_21985001 Sg4 567 chr2L 21996918 21996973 chr2L 21997024 21997079 10 106 4.0 3.0 3.5 2.2 161 chr2L 21996918 intergenic not near genes chr2L 21996998 intergenic not near genes chr2L 21997079 intergenic not near genes chr2L_10_21995001 chr2L_21995001 Sg4 568 chr2L 22001632 22001673 chr2L 22001733 22001774 8 100 2.0 1.5 1.8 2.9 142 chr2L 22001632 intergenic not near genes chr2L 22001703 intergenic not near genes chr2L 22001774 intergenic not near genes chr2L_8_22000001 chr2L_22000001 Sg4 569 chr2L 22007906 22007943 chr2L 22008013 22008045 6 104 6.5 2.5 4.5 1.1 139 chr2L 22007906 intergenic not near genes chr2L 22007976 intergenic not near genes chr2L 22008045 intergenic not near genes chr2L_6_22005001 chr2L_22005001 Sg4 570 chr2L 22025803 22025850 chr2L 22025907 22025954 8 104 2.5 2.5 2.5 2.3 151 chr2L 22025803 intergenic tio + chr2L 22025878 intergenic tio + chr2L 22025954 intergenic tio + chr2L_8_22025001 chr2L_22025001 Sg4 571 chr2L 22047231 22047257 chr2L 22047381 22047407 8 148 3.0 7.5 5.2 1.3 176 chr2L 22047231 intergenic not near genes chr2L 22047319 intergenic not near genes chr2L 22047407 intergenic not near genes chr2L_8_22045001 chr2L_22045001 Sg4 572 chr2L 22107349 22107361 chr2L 22107501 22107513 6 152 8.0 0.5 4.2 1.2 164 chr2L 22107349 intergenic CG10834 - chr2L 22107431 intergenic CG10834 - chr2L 22107513 intergenic CG10834 - chr2L_6_22105001 chr2L_22105001 Sg4 573 chr2L 22212111 22212159 chr2L 22212683 22212731 6 572 1.5 1.0 1.2 2.7 620 chr2L 22212111 intron Ir40a - chr2L 22212421 intron Ir40a - chr2L 22212731 exon Ir40a - chr2L_6_22210001 chr2L_22210001 Sg4 574 chr2L 22215891 22215935 chr2L 22216001 22216046 11 110 2.5 4.5 3.5 2.4 155 chr2L 22215891 intergenic not near genes chr2L 22215968 intergenic not near genes chr2L 22216046 intergenic not near genes chr2L_11_22215001 chr2L_22215001 Sg4 575 chr2L 22239407 22239459 chr2L 22239513 22239565 15 103 4.0 6.0 5.0 2.5 158 chr2L 22239407 intron CR43765 - chr2L 22239486 3` UTR CR43765 - chr2L 22239565 3` UTR CR43765 - chr2L_15_22235001 chr2L_22235001 Sg4 576 chr2L 22258596 22258641 chr2L 22260745 22260790 G6 17 2149 3.5 5.0 4.2 3.3 2194 chr2L 22258596 intergenic Tif-IA + chr2L 22259693 intergenic not near genes chr2L 22260790 intergenic not near genes chr2L_17_22255001 chr2L_22255001 Sg4 577 chr2L 22294351 22294382 chr2L 22294463 22294495 4 113 2.5 1.5 2.0 1.3 144 chr2L 22294351 intergenic not near genes chr2L 22294423 intergenic not near genes chr2L 22294495 intergenic not near genes chr2L_4_22290001 chr2L_22290001 Sg4 578 chr2L 22538328 22538351 chr2L 22538611 22538634 4 283 9.0 8.0 8.5 0.4 306 chr2L 22538328 intron CG17490 + chr2L 22538481 intron CG17490 + chr2L 22538634 intron CG17490 + chr2L_4_22535001 chr2L_22535001 Sg4 579 chr2L 22581951 22582002 chr2L 22583765 22583816 S-element 6 1814 1.5 3.0 2.2 1.9 1865 chr2L 22581951 intron CG17494 + chr2L 22582884 intron CG17494 + chr2L 22583816 intron CG17494 + chr2L_6_22580001 chr2L_22580001 Sg4 580 chr2L 22706781 22706827 chr2L 22706909 22706955 7 128 3.0 2.0 2.5 2.0 174 chr2L 22706781 intron CG40006 - chr2L 22706868 intron CG40006 - chr2L 22706955 intron CG40006 - chr2L_7_22705001 chr2L_22705001 Sg4 581 chr2L 22776399 22776435 chr2L 22778213 22778249 S-element 6 1814 3.0 0.5 1.8 2.1 1850 chr2L 22776399 intergenic not near genes chr2L 22777324 intergenic not near genes chr2L 22778249 intergenic not near genes chr2L_6_22775001 chr2L_22775001 Sg4 582 chr2L 23181378 23181396 chr2L 23181512 23181530 4 134 3.5 2.0 2.8 1.1 152 chr2L 23181378 intergenic not near genes chr2L 23181454 intergenic not near genes chr2L 23181530 intergenic not near genes chr2L_4_23180001 chr2L_23180001 Sg4 583 chr2R 469945 469971 chr2R 473211 473237 F-element 4 3266 2.5 4.5 3.5 0.9 3292 chr2R 469945 intergenic not near genes chr2R 471591 intergenic not near genes chr2R 473237 intergenic not near genes chr2R_4_470001 chr2R_470001 Sg4 584 chr2R 529325 529350 chr2R 537960 538000 Max-element 5 8647 6.0 5.0 5.5 0.8 8675 chr2R 529325 intron CG40378 + chr2R 533662 intron CG40378 + chr2R 538000 intron CG40378 + chr2R_5_530001 chr2R_530001 Sg4 585 chr2R 1516580 1516599 chr2R 1521333 1521352 1731 14 4753 40.5 35.0 37.8 0.4 4772 chr2R 1516580 exon Maf1 - chr2R 1518966 intron Maf1 - chr2R 1521352 5` UTR Maf1 - chr2R_14_1515001 chr2R_1515001 Sg4 586 chr2R 1919577 1919610 chr2R 1920028 1920061 5 451 4.0 4.5 4.2 1.0 484 chr2R 1919577 intron CG17684 - chr2R 1919819 intron CG17684 - chr2R 1920061 intron CG17684 - chr2R_5_1915001 chr2R_1915001 Sg4 587 chr2R 3293731 3293756 chr2R 3293834 3293854 12 102 0.5 0.0 0.2 10.0 123 chr2R 3293731 intergenic not near genes chr2R 3293792 intergenic not near genes chr2R 3293854 intergenic not near genes chr2R_12_3290001 chr2R_3290001 Sg4 588 chr2R 4247800 4247836 chr2R 4247911 4247922 13 99 16.0 18.5 17.2 0.7 122 chr2R 4247800 intergenic not near genes chr2R 4247861 intergenic not near genes chr2R 4247922 intergenic not near genes chr2R_13_4245001 chr2R_4245001 Sg4 589 chr2R 4265282 4265291 chr2R 4265390 4265394 6 106 18.0 13.0 15.5 0.4 112 chr2R 4265282 intergenic not near genes chr2R 4265338 intergenic not near genes chr2R 4265394 intergenic not near genes chr2R_6_4265001 chr2R_4265001 Sg4 590 chr2R 4580167 4580224 chr2R 4580819 4580821 13 647 3.0 2.5 2.8 3.4 654 chr2R 4580167 intergenic not near genes chr2R 4580494 intergenic not near genes chr2R 4580821 intergenic not near genes chr2R_13_4580001 chr2R_4580001 Sg4 591 chr2R 4604529 4604537 chr2R 4604633 4604641 4 104 12.0 2.5 7.2 0.5 112 chr2R 4604529 intron p120ctn + chr2R 4604585 intron p120ctn + chr2R 4604641 intron p120ctn + chr2R_4_4600001 chr2R_4600001 Sg4 592 chr2R 4604550 4604582 chr2R 4604627 4604687 6 99 5.0 4.5 4.8 1.0 137 chr2R 4604550 intron p120ctn + chr2R 4604618 intron p120ctn + chr2R 4604687 intron p120ctn + chr2R_6_4600001 chr2R_4600001 Sg4 593 chr2R 4622948 4622988 chr2R 4624117 4624118 1360 10 1171 2.0 3.5 2.8 2.6 1170 chr2R 4622948 intergenic CR44101 - chr2R 4623533 intergenic not near genes chr2R 4624118 intergenic not near genes chr2R_10_4620001 chr2R_4620001 Sg4 594 chr2R 4656756 4656810 chr2R 4656991 4657010 21 229 32.5 34.5 33.5 0.6 254 chr2R 4656756 intergenic not near genes chr2R 4656883 intergenic not near genes chr2R 4657010 intergenic not near genes chr2R_21_4655001 chr2R_4655001 Sg4 595 chr2R 4688102 4688130 chr2R 4688220 4688242 10 117 2.5 7.5 5.0 1.7 140 chr2R 4688102 intergenic not near genes chr2R 4688172 intergenic not near genes chr2R 4688242 intergenic not near genes chr2R_10_4685001 chr2R_4685001 Sg4 596 chr2R 4750323 4750368 chr2R 4751505 4751526 1360 4 1176 3.5 2.0 2.8 1.1 1203 chr2R 4750323 intron conu + chr2R 4750924 intron conu + chr2R 4751526 intron conu + chr2R_4_4750001 chr2R_4750001 Sg4 597 chr2R 4819821 4819874 chr2R 4819935 4819988 13 114 2.0 2.0 2.0 4.3 167 chr2R 4819821 exon CG17528 - chr2R 4819904 exon CG17528 - chr2R 4819988 intron CG17528 - chr2R_13_4815001 chr2R_4815001 Sg4 598 chr2R 4940936 4940955 chr2R 4943411 4943430 6 2475 22.5 29.0 25.8 0.2 2494 chr2R 4940936 intron Ir41a + chr2R 4942183 intron Ir41a + chr2R 4943430 intron Ir41a + chr2R_6_4940001 chr2R_4940001 Sg4 599 chr2R 5019261 5019309 chr2R 5019372 5019420 9 111 3.0 4.0 3.5 2.0 159 chr2R 5019261 intron Ir41a + chr2R 5019340 intron Ir41a + chr2R 5019420 intron Ir41a + chr2R_9_5015001 chr2R_5015001 Sg4 600 chr2R 5038510 5038536 chr2R 5039332 5039343 4 818 3.5 2.0 2.8 1.1 833 chr2R 5038510 intergenic not near genes chr2R 5038926 intergenic not near genes chr2R 5039343 intergenic not near genes chr2R_4_5035001 chr2R_5035001 Sg4 601 chr2R 5075199 5075217 chr2R 5075352 5075370 7 153 6.5 0.0 3.2 1.7 171 chr2R 5075199 intergenic not near genes chr2R 5075284 intergenic not near genes chr2R 5075370 intergenic not near genes chr2R_7_5075001 chr2R_5075001 Sg4 602 chr2R 5075240 5075372 chr2R 5075756 5075813 10 478 0.0 4.5 2.2 3.1 573 chr2R 5075240 intergenic not near genes chr2R 5075526 intergenic not near genes chr2R 5075813 intergenic not near genes chr2R_10_5075001 chr2R_5075001 Sg4 603 chr2R 5080767 5080818 chr2R 5080878 5080934 7 113 1.5 3.0 2.2 2.2 167 chr2R 5080767 intergenic not near genes chr2R 5080850 intergenic not near genes chr2R 5080934 intergenic not near genes chr2R_7_5080001 chr2R_5080001 Sg4 604 chr2R 5144905 5144925 chr2R 5145006 5145026 5 102 2.5 0.5 1.5 2.0 121 chr2R 5144905 intron Atf6 + chr2R 5144966 intron Atf6 + chr2R 5145026 intron Atf6 + chr2R_5_5140001 chr2R_5140001 Sg4 605 chr2R 5192709 5192718 chr2R 5192811 5192816 5 101 1.5 2.5 2.0 1.7 107 chr2R 5192709 intron Nipped-A - chr2R 5192762 intron Nipped-A - chr2R 5192816 intron Nipped-A - chr2R_5_5190001 chr2R_5190001 Sg4 606 chr2R 5209763 5209812 chr2R 5210321 5210369 13 557 1.5 1.5 1.5 5.2 606 chr2R 5209763 intron Nipped-A - chr2R 5210066 intron Nipped-A - chr2R 5210369 intron Nipped-A - chr2R_13_5210001 chr2R_5210001 Sg4 607 chr2R 5303463 5303519 chr2R 5303576 5303632 11 112 16.5 19.5 18.0 0.6 169 chr2R 5303463 intergenic not near genes chr2R 5303548 intergenic not near genes chr2R 5303632 intergenic not near genes chr2R_11_5300001 chr2R_5300001 Sg4 608 chr2R 5342802 5342853 chr2R 5342924 5342975 7 121 2.0 4.5 3.2 1.7 173 chr2R 5342802 intergenic not near genes chr2R 5342888 intergenic not near genes chr2R 5342975 intergenic not near genes chr2R_7_5340001 chr2R_5340001 Sg4 609 chr2R 5363470 5363507 chr2R 5363573 5363617 8 105 3.5 1.5 2.5 2.3 147 chr2R 5363470 5` UTR CR42646 + chr2R 5363544 intron CR42646 + chr2R 5363617 intron CR42646 + chr2R_8_5360001 chr2R_5360001 Sg4 610 chr2R 5417972 5418024 chr2R 5420629 5420681 Burdock 9 2657 2.0 2.5 2.2 2.8 2709 chr2R 5417972 intron laccase2 + chr2R 5419326 intron laccase2 + chr2R 5420681 intron laccase2 + chr2R_9_5415001 chr2R_5415001 Sg4 611 chr2R 5450098 5450116 chr2R 5451012 5451044 baggins 5 916 5.5 3.5 4.5 0.9 946 chr2R 5450098 intron laccase2 + chr2R 5450571 intron laccase2 + chr2R 5451044 intron laccase2 + chr2R_5_5450001 chr2R_5450001 Sg4 612 chr2R 5455756 5455763 chr2R 5455859 5455866 4 103 3.5 3.0 3.2 1.0 110 chr2R 5455756 3` UTR laccase2 + chr2R 5455811 3` UTR laccase2 + chr2R 5455866 3` UTR laccase2 + chr2R_4_5455001 chr2R_5455001 Sg4 613 chr2R 5455765 5455800 chr2R 5455857 5455903 14 100 0.0 3.0 1.5 5.6 138 chr2R 5455765 3` UTR laccase2 + chr2R 5455834 3` UTR laccase2 + chr2R 5455903 3` UTR laccase2 + chr2R_14_5455001 chr2R_5455001 Sg4 614 chr2R 5463258 5463259 chr2R 5468680 5468711 4 5430 23.0 17.0 20.0 0.2 5453 chr2R 5463258 intergenic not near genes chr2R 5465984 intergenic not near genes chr2R 5468711 intron CG30440 - chr2R_4_5465001 chr2R_5465001 Sg4 615 chr2R 5472344 5472392 chr2R 5472464 5472512 11 119 4.0 2.5 3.2 2.6 168 chr2R 5472344 intron CG30440 - chr2R 5472428 intron CG30440 - chr2R 5472512 intron CG30440 - chr2R_11_5470001 chr2R_5470001 Sg4 616 chr2R 5491703 5491729 chr2R 5491869 5491895 6 166 5.0 4.0 4.5 1.1 192 chr2R 5491703 intron CG30440 - chr2R 5491799 intron CG30440 - chr2R 5491895 intron CG30440 - chr2R_6_5490001 chr2R_5490001 Sg4 617 chr2R 5603166 5603216 chr2R 5603273 5603323 16 106 3.0 2.0 2.5 4.6 157 chr2R 5603166 intergenic Fis1 - chr2R 5603244 intergenic Fis1 - chr2R 5603323 intergenic Fis1 - chr2R_16_5600001 chr2R_5600001 Sg4 618 chr2R 5652405 5652458 chr2R 5652827 5652880 5 421 11.5 8.5 10.0 0.5 475 chr2R 5652405 intron CG11665 - chr2R 5652642 5` UTR CG11665 - chr2R 5652880 intergenic CG11665 - chr2R_5_5650001 chr2R_5650001 Sg4 619 chr2R 5710626 5710681 chr2R 5710728 5710783 11 102 2.5 1.5 2.0 3.7 157 chr2R 5710626 intron ap - chr2R 5710704 intron ap - chr2R 5710783 intron ap - chr2R_11_5710001 chr2R_5710001 Sg4 620 chr2R 5750426 5750450 chr2R 5750543 5750567 9 114 4.5 3.5 4.0 1.8 141 chr2R 5750426 intergenic not near genes chr2R 5750496 intergenic not near genes chr2R 5750567 intergenic not near genes chr2R_9_5750001 chr2R_5750001 Sg4 621 chr2R 5772503 5772541 chr2R 5772622 5772660 7 116 2.5 1.0 1.8 2.5 157 chr2R 5772503 3` UTR Gp210 + chr2R 5772582 3` UTR Gp210 + chr2R 5772660 3` UTR Gp210 + chr2R_7_5770001 chr2R_5770001 Sg4 622 chr2R 5772816 5772854 chr2R 5772923 5772961 7 107 2.5 3.5 3.0 1.8 145 chr2R 5772816 3` UTR Gp210 + chr2R 5772888 3` UTR Gp210 + chr2R 5772961 3` UTR Gp210 + chr2R_7_5770001 chr2R_5770001 Sg4 623 chr2R 5790438 5790491 chr2R 5790548 5790601 6 110 2.5 2.5 2.5 1.7 163 chr2R 5790438 intergenic not near genes chr2R 5790520 intergenic not near genes chr2R 5790601 intergenic not near genes chr2R_6_5790001 chr2R_5790001 Sg4 624 chr2R 5797175 5797212 chr2R 5797588 5797625 7 412 13.5 15.5 14.5 0.5 450 chr2R 5797175 intergenic Or42b -,Tsp42A + chr2R 5797400 exon Or42b - chr2R 5797625 exon Or42b - chr2R_7_5795001 chr2R_5795001 Sg4 625 chr2R 5859961 5860009 chr2R 5860097 5860144 16 133 2.5 4.5 3.5 3.6 183 chr2R 5859961 3` UTR dpr12 + chr2R 5860052 3` UTR dpr12 + chr2R 5860144 3` UTR dpr12 + chr2R_16_5860001 chr2R_5860001 Sg4 626 chr2R 5868048 5868093 chr2R 5868183 5868238 12 144 0.5 3.5 2.0 4.0 190 chr2R 5868048 intergenic not near genes chr2R 5868143 intergenic not near genes chr2R 5868238 intergenic not near genes chr2R_12_5865001 chr2R_5865001 Sg4 627 chr2R 5869250 5869304 chr2R 5874351 5874405 flea 20 5101 5.0 4.0 4.5 3.6 5155 chr2R 5869250 intergenic not near genes chr2R 5871828 intergenic not near genes chr2R 5874405 intergenic not near genes chr2R_20_5870001 chr2R_5870001 Sg4 628 chr2R 5878906 5878951 chr2R 5879011 5879056 7 105 2.0 4.0 3.0 1.8 150 chr2R 5878906 intergenic CG44438 - chr2R 5878981 intergenic CG44438 - chr2R 5879056 intergenic CG44438 - chr2R_7_5875001 chr2R_5875001 Sg4 629 chr2R 5885231 5885372 chr2R 5885317 5885526 18 121 0.0 0.0 0.0 18.0 295 chr2R 5885231 5` UTR CR44125 + chr2R 5885378 5` UTR CR44125 + chr2R 5885526 5` UTR CR44125 + chr2R_18_5885001 chr2R_5885001 Sg4 630 chr2R 5902143 5902188 chr2R 5909727 5909772 17.6 7 7583 4.5 5.0 4.8 1.2 7629 chr2R 5902143 intron CG43366 + chr2R 5905958 intron CG43366 + chr2R 5909772 intron CG43366 + chr2R_7_5905001 chr2R_5905001 Sg4 631 chr2R 5947054 5947081 chr2R 5947200 5947227 5 146 3.0 4.0 3.5 1.1 173 chr2R 5947054 intergenic not near genes chr2R 5947140 intergenic not near genes chr2R 5947227 intergenic not near genes chr2R_5_5945001 chr2R_5945001 Sg4 632 chr2R 5990512 5990563 chr2R 5991061 5991112 9 549 6.0 2.5 4.2 1.7 600 chr2R 5990512 intron Src42A + chr2R 5990812 intron Src42A + chr2R 5991112 intron Src42A + chr2R_9_5990001 chr2R_5990001 Sg4 633 chr2R 6024993 6025193 chr2R 6025136 6025426 18 202 0.5 0.5 0.5 12.0 433 chr2R 6024993 intergenic not near genes chr2R 6025210 intergenic not near genes chr2R 6025426 intergenic not near genes chr2R_18_6025001 chr2R_6025001 Sg4 634 chr2R 6096700 6096750 chr2R 6101923 6101941 BS 13 5220 6.0 7.5 6.8 1.7 5241 chr2R 6096700 intron EcR - chr2R 6099320 intron EcR - chr2R 6101941 intron EcR - chr2R_13_6095001 chr2R_6095001 Sg4 635 chr2R 6129299 6129349 chr2R 6129402 6129452 20 102 3.0 5.5 4.2 3.8 153 chr2R 6129299 intron EcR - chr2R 6129376 intron EcR - chr2R 6129452 intron EcR - chr2R_20_6125001 chr2R_6125001 Sg4 636 chr2R 6175570 6175611 chr2R 6175683 6175724 8 111 2.5 2.0 2.2 2.5 154 chr2R 6175570 3` UTR Cyp6w1 + chr2R 6175647 3` UTR Cyp6w1 + chr2R 6175724 3` UTR Cyp6w1 + chr2R_8_6175001 chr2R_6175001 Sg4 637 chr2R 6178657 6178712 chr2R 6178769 6178824 11 112 4.0 1.5 2.8 2.9 167 chr2R 6178657 intergenic not near genes chr2R 6178740 intergenic not near genes chr2R 6178824 intergenic not near genes chr2R_11_6175001 chr2R_6175001 Sg4 638 chr2R 6194664 6194685 chr2R 6194772 6194782 10 107 6.5 6.5 6.5 1.3 118 chr2R 6194664 intron Ptr - chr2R 6194723 intron Ptr - chr2R 6194782 intron Ptr - chr2R_10_6190001 chr2R_6190001 Sg4 639 chr2R 6494507 6494544 chr2R 6499294 6499331 F-element 8 4787 6.0 1.5 3.8 1.7 4824 chr2R 6494507 intergenic not near genes chr2R 6496919 intergenic not near genes chr2R 6499331 intergenic not near genes chr2R_8_6495001 chr2R_6495001 Sg4 640 chr2R 6579776 6579798 chr2R 6584888 6584910 flea 5 5112 4.0 3.0 3.5 1.1 5134 chr2R 6579776 intron jing + chr2R 6582343 intron jing + chr2R 6584910 intron jing + chr2R_5_6580001 chr2R_6580001 Sg4 641 chr2R 6691107 6691148 chr2R 6691206 6691252 17 103 3.5 2.0 2.8 4.5 145 chr2R 6691107 intron CG9422 + chr2R 6691180 intron CG9422 + chr2R 6691252 intron CG9422 + chr2R_17_6690001 chr2R_6690001 Sg4 642 chr2R 6696590 6696632 chr2R 6696698 6696733 15 106 5.5 7.5 6.5 2.0 143 chr2R 6696590 5` UTR Mob4 - chr2R 6696662 intergenic Mob4 -,Rab2 + chr2R 6696733 intergenic Rab2 +,Mob4 - chr2R_15_6695001 chr2R_6695001 Sg4 643 chr2R 6699565 6699623 chr2R 6699675 6699733 8 109 3.5 2.0 2.8 2.1 168 chr2R 6699565 intergenic Rab2 + chr2R 6699649 intergenic Rab2 + chr2R 6699733 intergenic Rab2 +,CG3409 -,CG45092 - chr2R_8_6695001 chr2R_6695001 Sg4 644 chr2R 6706943 6706998 chr2R 6707229 6707284 5 286 4.0 3.0 3.5 1.1 341 chr2R 6706943 intron,intron CG3409 -,CG45092 - chr2R 6707114 intron,intron CG3409 -,CG45092 - chr2R 6707284 intron,intron CG3409 -,CG45092 - chr2R_5_6705001 chr2R_6705001 Sg4 645 chr2R 6712561 6712599 chr2R 6712683 6712721 10 122 5.5 4.5 5.0 1.7 160 chr2R 6712561 intron,intron CG3409 -,CG45092 - chr2R 6712641 intron,intron CG3409 -,CG45092 - chr2R 6712721 intron,intron CG3409 -,CG45092 - chr2R_10_6710001 chr2R_6710001 Sg4 646 chr2R 6797055 6797110 chr2R 6797173 6797222 13 114 5.0 8.5 6.8 1.7 167 chr2R 6797055 5` UTR Epac - chr2R 6797138 5` UTR Epac - chr2R 6797222 5` UTR Epac - chr2R_13_6795001 chr2R_6795001 Sg4 647 chr2R 6801292 6801343 chr2R 6801394 6801445 16 100 6.5 5.5 6.0 2.3 153 chr2R 6801292 intergenic not near genes chr2R 6801368 intergenic not near genes chr2R 6801445 intergenic not near genes chr2R_16_6800001 chr2R_6800001 Sg4 648 chr2R 6825433 6825467 chr2R 6825551 6825585 9 118 2.0 5.5 3.8 1.9 152 chr2R 6825433 intergenic not near genes chr2R 6825509 intergenic not near genes chr2R 6825585 intergenic not near genes chr2R_9_6825001 chr2R_6825001 Sg4 649 chr2R 6890635 6890677 chr2R 6890747 6890796 15 117 5.0 2.0 3.5 3.3 161 chr2R 6890635 intergenic not near genes chr2R 6890716 intergenic not near genes chr2R 6890796 intergenic not near genes chr2R_15_6890001 chr2R_6890001 Sg4 650 chr2R 6952148 6952185 chr2R 6959748 6959790 opus 9 7604 4.5 0.5 2.5 2.6 7642 chr2R 6952148 intron,intron,exon mim -,CheB42c -,ppk25 + chr2R 6955969 intron,intron mim -,CheB42c - chr2R 6959790 intron,intron mim -,CheB42c - chr2R_9_6955001 chr2R_6955001 Sg4 651 chr2R 6961865 6961902 chr2R 6961975 6962012 7 110 4.5 4.5 4.5 1.3 147 chr2R 6961865 intron,intron mim -,CheB42c - chr2R 6961938 intron,intron mim -,CheB42c - chr2R 6962012 intron,intron mim -,CheB42c - chr2R_7_6960001 chr2R_6960001 Sg4 652 chr2R 7091195 7091235 chr2R 7091302 7091342 10 107 3.0 3.5 3.2 2.4 147 chr2R 7091195 intron esn + chr2R 7091268 intron esn + chr2R 7091342 intron esn + chr2R_10_7090001 chr2R_7090001 Sg4 653 chr2R 7139945 7139952 chr2R 7141462 7141469 hopper2 5 1517 3.5 13.0 8.2 0.5 1524 chr2R 7139945 intergenic not near genes chr2R 7140707 intergenic not near genes chr2R 7141469 intergenic not near genes chr2R_5_7140001 chr2R_7140001 Sg4 654 chr2R 7171245 7171269 chr2R 7171356 7171380 5 110 3.5 6.0 4.8 0.9 135 chr2R 7171245 intron pk + chr2R 7171312 intron pk + chr2R 7171380 intron pk + chr2R_5_7170001 chr2R_7170001 Sg4 655 chr2R 7196555 7196589 chr2R 7201355 7201388 F-element 7 4800 2.5 3.5 3.0 1.8 4833 chr2R 7196555 intron pk + chr2R 7198972 intron pk + chr2R 7201388 intron pk + chr2R_7_7195001 chr2R_7195001 Sg4 656 chr2R 7209850 7209859 chr2R 7217623 7217632 roo 5 7773 2.0 7.5 4.8 0.9 7782 chr2R 7209850 intron pk + chr2R 7213741 intron pk + chr2R 7217632 intron pk + chr2R_5_7210001 chr2R_7210001 Sg4 657 chr2R 7235797 7235851 chr2R 7240914 7240948 jockey 16 5114 2.5 5.0 3.8 3.3 5151 chr2R 7235797 intergenic not near genes chr2R 7238372 intergenic not near genes chr2R 7240948 intergenic not near genes chr2R_16_7235001 chr2R_7235001 Sg4 658 chr2R 7262181 7262208 chr2R 7269269 7269294 297 7 7086 2.5 7.5 5.0 1.2 7113 chr2R 7262181 intergenic not near genes chr2R 7265738 intergenic not near genes chr2R 7269294 intergenic not near genes chr2R_7_7265001 chr2R_7265001 Sg4 659 chr2R 7328105 7328151 chr2R 7328241 7328287 9 136 0.5 2.0 1.2 4.1 182 chr2R 7328105 intron,intron Dscam1 -,CR45129 + chr2R 7328196 intron,intron Dscam1 -,CR45129 + chr2R 7328287 intron,intron Dscam1 -,CR45129 + chr2R_9_7325001 chr2R_7325001 Sg4 660 chr2R 7353372 7353418 chr2R 7353503 7353549 11 131 1.5 4.5 3.0 2.8 177 chr2R 7353372 intron Dscam1 - chr2R 7353460 intron Dscam1 - chr2R 7353549 intron Dscam1 - chr2R_11_7350001 chr2R_7350001 Sg4 661 chr2R 7414231 7414248 chr2R 7414552 7414569 6 320 22.5 14.5 18.5 0.3 338 chr2R 7414231 intergenic not near genes chr2R 7414400 intergenic not near genes chr2R 7414569 intergenic not near genes chr2R_6_7410001 chr2R_7410001 Sg4 662 chr2R 7417882 7418167 chr2R 7417993 7418271 19 105 3.5 5.5 4.5 3.5 389 chr2R 7417882 intergenic not near genes chr2R 7418076 intergenic not near genes chr2R 7418271 intergenic not near genes chr2R_19_7415001 chr2R_7415001 Sg4 663 chr2R 7434873 7434908 chr2R 7439199 7439234 Juan 13 4325 15.0 7.0 11.0 1.1 4361 chr2R 7434873 intergenic so + chr2R 7437054 intergenic not near genes chr2R 7439234 intergenic not near genes chr2R_13_7435001 chr2R_7435001 Sg4 664 chr2R 7473925 7473980 chr2R 7474027 7474082 14 102 4.5 5.5 5.0 2.3 157 chr2R 7473925 intron Aldh-III - chr2R 7474004 intron Aldh-III - chr2R 7474082 intron Aldh-III - chr2R_14_7470001 chr2R_7470001 Sg4 665 chr2R 7608383 7608444 chr2R 7613611 7613671 I-element 8 5228 3.5 0.0 1.8 2.9 5288 chr2R 7608383 intron CG1358 - chr2R 7611027 intron CG1358 - chr2R 7613671 intron CG1358 - chr2R_8_7610001 chr2R_7610001 Sg4 666 chr2R 7615139 7615145 chr2R 7615544 7615585 4 423 0.5 4.0 2.2 1.2 446 chr2R 7615139 intron CG1358 - chr2R 7615362 intron CG1358 - chr2R 7615585 intron CG1358 - chr2R_4_7615001 chr2R_7615001 Sg4 667 chr2R 7642844 7642885 chr2R 7642949 7642990 16 105 6.0 4.5 5.2 2.6 146 chr2R 7642844 intron CG43340 + chr2R 7642917 intron CG43340 + chr2R 7642990 intron CG43340 + chr2R_16_7640001 chr2R_7640001 Sg4 668 chr2R 7655427 7655479 chr2R 7655569 7655611 15 142 20.0 26.5 23.2 0.6 184 chr2R 7655427 exon CG30491 + chr2R 7655519 intron CG30491 + chr2R 7655611 exon CG30491 + chr2R_15_7655001 chr2R_7655001 Sg4 669 chr2R 7687122 7687172 chr2R 7687311 7687361 19 187 5.5 3.0 4.2 3.7 239 chr2R 7687122 intron CG1399 - chr2R 7687242 intron CG1399 - chr2R 7687361 intron CG1399 - chr2R_19_7685001 chr2R_7685001 Sg4 670 chr2R 7690643 7690673 chr2R 7690741 7690776 8 102 5.0 2.5 3.8 1.7 133 chr2R 7690643 intron CG1399 - chr2R 7690710 intron CG1399 - chr2R 7690776 intron CG1399 - chr2R_8_7690001 chr2R_7690001 Sg4 671 chr2R 7691992 7692038 chr2R 7692098 7692144 13 105 2.5 3.5 3.0 3.2 152 chr2R 7691992 intron CG1399 - chr2R 7692068 intron CG1399 - chr2R 7692144 intron CG1399 - chr2R_13_7690001 chr2R_7690001 Sg4 672 chr2R 7742604 7742639 chr2R 7742878 7742914 11 279 4.5 3.5 4.0 2.2 310 chr2R 7742604 intron,intron CG30497 -,CG45093 - chr2R 7742759 intron,intron CG30497 -,CG45093 - chr2R 7742914 intron,intron CG30497 -,CG45093 - chr2R_11_7740001 chr2R_7740001 Sg4 673 chr2R 7769725 7769762 chr2R 7769827 7769864 5 102 2.0 2.5 2.2 1.6 139 chr2R 7769725 intron,intron CG30497 -,CG45093 - chr2R 7769794 intron,intron CG30497 -,CG45093 - chr2R 7769864 intron,intron CG30497 -,CG45093 - chr2R_5_7765001 chr2R_7765001 Sg4 674 chr2R 7815653 7815695 chr2R 7822147 7822189 Burdock 9 6494 6.5 4.5 5.5 1.4 6536 chr2R 7815653 intergenic CG1882 + chr2R 7818921 intergenic not near genes chr2R 7822189 3` UTR cathD - chr2R_9_7815001 chr2R_7815001 Sg4 675 chr2R 7869191 7869200 chr2R 7873997 7874011 Doc 4 4810 5.5 4.5 5.0 0.7 4820 chr2R 7869191 intron Dgk - chr2R 7871601 intron Dgk - chr2R 7874011 intron Dgk - chr2R_4_7870001 chr2R_7870001 Sg4 676 chr2R 7897137 7897151 chr2R 7897251 7897265 6 113 0.0 13.5 6.8 0.8 128 chr2R 7897137 intron CG30377 + chr2R 7897201 intron CG30377 + chr2R 7897265 intron CG30377 + chr2R_6_7895001 chr2R_7895001 Sg4 677 chr2R 8015629 8015678 chr2R 8017677 8017700 9 2044 2.0 3.5 2.8 2.4 2071 chr2R 8015629 intergenic mir-4981 + chr2R 8016664 intergenic not near genes chr2R 8017700 intergenic not near genes chr2R_9_8015001 chr2R_8015001 Sg4 678 chr2R 8089230 8089284 chr2R 8089341 8089395 18 111 2.5 6.0 4.2 3.5 165 chr2R 8089230 3` UTR sut2 + chr2R 8089312 intergenic sut2 +,sut3 + chr2R 8089395 intergenic sut3 +,sut2 + chr2R_18_8085001 chr2R_8085001 Sg4 679 chr2R 8209590 8209628 chr2R 8209682 8209730 10 94 10.5 13.5 12.0 0.8 140 chr2R 8209590 exon LRP1 + chr2R 8209660 intron LRP1 + chr2R 8209730 exon LRP1 + chr2R_10_8205001 chr2R_8205001 Sg4 680 chr2R 8236018 8236050 chr2R 8236124 8236155 4 104 3.5 2.0 2.8 1.1 137 chr2R 8236018 intergenic not near genes chr2R 8236086 intergenic not near genes chr2R 8236155 intergenic not near genes chr2R_4_8235001 chr2R_8235001 Sg4 681 chr2R 8243381 8243427 chr2R 8243511 8243557 4 130 5.0 3.0 4.0 0.8 176 chr2R 8243381 3` UTR CR44445 - chr2R 8243469 3` UTR CR44445 - chr2R 8243557 intergenic CR44445 - chr2R_4_8240001 chr2R_8240001 Sg4 682 chr2R 8254037 8254070 chr2R 8254136 8254185 14 110 5.5 3.0 4.2 2.7 148 chr2R 8254037 intergenic CG14760 + chr2R 8254111 intergenic CG14760 + chr2R 8254185 intergenic CG14760 + chr2R_14_8250001 chr2R_8250001 Sg4 683 chr2R 8294744 8294800 chr2R 8295112 8295158 15 363 4.0 2.5 3.2 3.6 414 chr2R 8294744 intergenic not near genes chr2R 8294951 intergenic not near genes chr2R 8295158 intergenic not near genes chr2R_15_8290001 chr2R_8290001 Sg4 684 chr2R 8330855 8330887 chr2R 8331352 8331398 roo 13 510 5.0 7.5 6.2 1.8 543 chr2R 8330855 intron pdm3 + chr2R 8331126 intron pdm3 + chr2R 8331398 intron pdm3 + chr2R_13_8330001 chr2R_8330001 Sg4 685 chr2R 8334262 8334314 chr2R 8334372 8334424 15 109 2.5 2.0 2.2 4.7 162 chr2R 8334262 intron pdm3 + chr2R 8334343 intron pdm3 + chr2R 8334424 intron pdm3 + chr2R_15_8330001 chr2R_8330001 Sg4 686 chr2R 8338616 8338662 chr2R 8338723 8338769 12 107 0.0 5.5 2.8 3.2 153 chr2R 8338616 intron pdm3 + chr2R 8338692 intron pdm3 + chr2R 8338769 intron pdm3 + chr2R_12_8335001 chr2R_8335001 Sg4 687 chr2R 8368171 8368207 chr2R 8368269 8368312 12 104 3.0 4.5 3.8 2.5 141 chr2R 8368171 intron pdm3 + chr2R 8368242 intron pdm3 + chr2R 8368312 intron pdm3 + chr2R_12_8365001 chr2R_8365001 Sg4 688 chr2R 8379762 8379817 chr2R 8379883 8379938 10 120 2.5 1.0 1.8 3.6 176 chr2R 8379762 intron pdm3 + chr2R 8379850 intron pdm3 + chr2R 8379938 intron pdm3 + chr2R_10_8375001 chr2R_8375001 Sg4 689 chr2R 8398188 8398224 chr2R 8402994 8403030 Doc 8 4804 8.5 4.0 6.2 1.1 4842 chr2R 8398188 intron CG2121 - chr2R 8400609 intron CG2121 - chr2R 8403030 intron CG2121 - chr2R_8_8400001 chr2R_8400001 Sg4 690 chr2R 8398226 8398241 chr2R 8402987 8403047 Doc 8 4800 4.5 3.5 4.0 1.6 4821 chr2R 8398226 intron CG2121 - chr2R 8400636 intron CG2121 - chr2R 8403047 intron CG2121 - chr2R_8_8400001 chr2R_8400001 Sg4 691 chr2R 8416224 8416276 chr2R 8416332 8416384 11 107 4.0 5.0 4.5 2.0 160 chr2R 8416224 intergenic not near genes chr2R 8416304 intergenic not near genes chr2R 8416384 intergenic not near genes chr2R_11_8415001 chr2R_8415001 Sg4 692 chr2R 8452008 8452062 chr2R 8452116 8452170 13 108 4.0 2.5 3.2 3.1 162 chr2R 8452008 intergenic Mal-A1 - chr2R 8452089 intergenic Mal-A1 - chr2R 8452170 intergenic Mal-A1 - chr2R_13_8450001 chr2R_8450001 Sg4 693 chr2R 8545675 8545726 chr2R 8545783 8545834 9 108 2.0 3.0 2.5 2.6 159 chr2R 8545675 intergenic not near genes chr2R 8545754 intergenic not near genes chr2R 8545834 intergenic not near genes chr2R_9_8545001 chr2R_8545001 Sg4 694 chr2R 8658234 8658247 chr2R 8658335 8658335 4 98 2.0 5.0 3.5 0.9 101 chr2R 8658234 intron ptc + chr2R 8658284 intron ptc + chr2R 8658335 intron ptc + chr2R_4_8655001 chr2R_8655001 Sg4 695 chr2R 8714710 8714722 chr2R 8714822 8714834 6 111 0.0 9.0 4.5 1.1 124 chr2R 8714710 3` UTR PGRP-SC1b + chr2R 8714772 3` UTR PGRP-SC1b + chr2R 8714834 3` UTR PGRP-SC1b + chr2R_6_8710001 chr2R_8710001 Sg4 696 chr2R 8722743 8722794 chr2R 8723009 8723053 pogo 16 262 4.5 2.5 3.5 3.6 310 chr2R 8722743 intron CG14767 - chr2R 8722898 intron CG14767 - chr2R 8723053 intron CG14767 - chr2R_16_8720001 chr2R_8720001 Sg4 697 chr2R 8849207 8849258 chr2R 8849310 8849361 6 103 2.5 1.0 1.8 2.1 154 chr2R 8849207 intron sns + chr2R 8849284 intron sns + chr2R 8849361 intron sns + chr2R_6_8845001 chr2R_8845001 Sg4 698 chr2R 8893349 8893383 chr2R 8893692 8893726 6 343 14.0 13.0 13.5 0.4 377 chr2R 8893349 intergenic Dmn +,Sec31 + chr2R 8893538 intergenic Sec31 +,Dmn + chr2R 8893726 5` UTR Sec31 + chr2R_6_8890001 chr2R_8890001 Sg4 699 chr2R 8964831 8964873 chr2R 8964938 8964980 8 107 1.5 3.0 2.2 2.5 149 chr2R 8964831 intron CG8216 - chr2R 8964906 intron CG8216 - chr2R 8964980 intron CG8216 - chr2R_8_8960001 chr2R_8960001 Sg4 700 chr2R 9043933 9043963 chr2R 9047257 9047286 10 3326 57.0 20.5 38.8 0.3 3353 chr2R 9043933 exon PPO2 - chr2R 9045610 3` UTR CG13743 - chr2R 9047286 intron CG13743 - chr2R_10_9045001 chr2R_9045001 Sg4 701 chr2R 9047397 9047436 chr2R 9047517 9047556 13 120 4.0 3.0 3.5 2.9 159 chr2R 9047397 intron CG13743 - chr2R 9047476 intron CG13743 - chr2R 9047556 intron CG13743 - chr2R_13_9045001 chr2R_9045001 Sg4 702 chr2R 9052685 9052735 chr2R 9052789 9052841 8 104 0.0 3.0 1.5 3.2 156 chr2R 9052685 intron CG13743 - chr2R 9052763 intron CG13743 - chr2R 9052841 intron CG13743 - chr2R_8_9050001 chr2R_9050001 Sg4 703 chr2R 9063110 9063159 chr2R 9063419 9063468 15 309 4.0 4.0 4.0 3.0 358 chr2R 9063110 intron ana + chr2R 9063289 intron ana + chr2R 9063468 intron ana + chr2R_15_9060001 chr2R_9060001 Sg4 704 chr2R 9075877 9075933 chr2R 9076037 9076093 19 160 5.5 2.0 3.8 4.0 216 chr2R 9075877 exon ana + chr2R 9075985 intron ana + chr2R 9076093 intron ana + chr2R_19_9075001 chr2R_9075001 Sg4 705 chr2R 9078462 9078509 chr2R 9078565 9078612 11 103 3.5 2.5 3.0 2.8 150 chr2R 9078462 intergenic CG8083 + chr2R 9078537 intergenic CG8083 + chr2R 9078612 intergenic CG8083 + chr2R_11_9075001 chr2R_9075001 Sg4 706 chr2R 9151276 9151324 chr2R 9157771 9157819 Burdock 15 6495 7.5 5.0 6.2 2.1 6543 chr2R 9151276 exon CG30345 + chr2R 9154548 intergenic not near genes chr2R 9157819 intergenic CG8008 - chr2R_15_9150001 chr2R_9150001 Sg4 707 chr2R 9212671 9212717 chr2R 9213182 9213228 roo 18 510 8.5 4.5 6.5 2.4 557 chr2R 9212671 intergenic CR45309 + chr2R 9212950 intergenic CR45309 + chr2R 9213228 5` UTR CR45309 + chr2R_18_9210001 chr2R_9210001 Sg4 708 chr2R 9237194 9237247 chr2R 9237584 9237637 14 390 1.0 5.5 3.2 3.3 443 chr2R 9237194 intron hig - chr2R 9237416 intron hig - chr2R 9237637 intron,exon hig -,Cyp4p2 + chr2R_14_9235001 chr2R_9235001 Sg4 709 chr2R 9368115 9368142 chr2R 9368201 9368220 14 96 10.0 0.5 5.2 2.3 105 chr2R 9368115 intron CG13954 - chr2R 9368168 intron CG13954 - chr2R 9368220 intron CG13954 - chr2R_14_9365001 chr2R_9365001 Sg4 710 chr2R 9389964 9389974 chr2R 9390113 9390123 4 149 9.0 5.0 7.0 0.5 159 chr2R 9389964 intergenic l(2)03659 +,CG13954 - chr2R 9390044 intergenic l(2)03659 + chr2R 9390123 intergenic l(2)03659 + chr2R_4_9390001 chr2R_9390001 Sg4 711 chr2R 9391031 9391089 chr2R 9391617 9391675 16 586 1.5 3.0 2.2 5.0 644 chr2R 9391031 exon l(2)03659 + chr2R 9391353 exon l(2)03659 + chr2R 9391675 exon l(2)03659 + chr2R_16_9390001 chr2R_9390001 Sg4 712 chr2R 9542305 9542364 chr2R 9542407 9542441 5 92 13.5 13.0 13.2 0.4 136 chr2R 9542305 3` UTR CG1888 - chr2R 9542373 3` UTR CG1888 - chr2R 9542441 3` UTR CG1888 - chr2R_5_9540001 chr2R_9540001 Sg4 713 chr2R 9561806 9561834 chr2R 9561918 9561947 4 113 0.5 3.5 2.0 1.3 141 chr2R 9561806 3` UTR,intron CR45281 -,CG1809 + chr2R 9561876 3` UTR,intron CR45281 -,CG1809 + chr2R 9561947 3` UTR,intron CR45281 -,CG1809 + chr2R_4_9560001 chr2R_9560001 Sg4 714 chr2R 9565517 9565543 chr2R 9565619 9565645 11 102 9.0 8.5 8.8 1.1 128 chr2R 9565517 intergenic CR45281 - chr2R 9565581 intergenic CR45281 - chr2R 9565645 intergenic CR45281 -,Not1 - chr2R_11_9565001 chr2R_9565001 Sg4 715 chr2R 9535104 9535141 chr2R 9568249 9568284 5 33140 35.5 21.5 28.5 0.2 33180 chr2R 9535104 exon brp + chr2R 9551694 intergenic not near genes chr2R 9568284 intron Not1 - chr2R_5_9550001 chr2R_9550001 Sg4 716 chr2R 9590469 9590515 chr2R 9590636 9590682 6 167 3.0 1.5 2.2 1.9 213 chr2R 9590469 intron clos - chr2R 9590576 intron clos - chr2R 9590682 intron clos - chr2R_6_9590001 chr2R_9590001 Sg4 717 chr2R 9656245 9656289 chr2R 9657055 9657099 7 810 12.0 11.5 11.8 0.5 854 chr2R 9656245 intron Mmp2 - chr2R 9656672 intron Mmp2 - chr2R 9657099 intron Mmp2 - chr2R_7_9655001 chr2R_9655001 Sg4 718 chr2R 9699383 9699437 chr2R 9699495 9699549 10 111 5.0 4.0 4.5 1.8 166 chr2R 9699383 intergenic not near genes chr2R 9699466 intergenic not near genes chr2R 9699549 intergenic not near genes chr2R_10_9695001 chr2R_9695001 Sg4 719 chr2R 9726594 9726643 chr2R 9734170 9734219 17.6 11 7576 4.0 4.5 4.2 2.1 7625 chr2R 9726594 intron sqa - chr2R 9730406 intron sqa - chr2R 9734219 intron sqa - chr2R_11_9730001 chr2R_9730001 Sg4 720 chr2R 9871028 9871071 chr2R 9871539 9871582 roo 11 511 0.0 9.5 4.8 1.9 554 chr2R 9871028 intron cbx - chr2R 9871305 intron cbx - chr2R 9871582 intron,5` UTR cbx -,CG18446 + chr2R_11_9870001 chr2R_9870001 Sg4 721 chr2R 9945423 9945465 chr2R 9945634 9945686 BS 14 218 3.5 4.5 4.0 2.8 263 chr2R 9945423 intron Mef2 - chr2R 9945554 intron Mef2 - chr2R 9945686 intron Mef2 - chr2R_14_9945001 chr2R_9945001 Sg4 722 chr2R 9998078 9998089 chr2R 9998197 9998208 6 119 6.0 11.0 8.5 0.6 130 chr2R 9998078 intron Pka-R2 - chr2R 9998143 intron Pka-R2 - chr2R 9998208 intron Pka-R2 - chr2R_6_9995001 chr2R_9995001 Sg4 723 chr2R 10005533 10005576 chr2R 10005655 10005698 13 122 5.0 3.0 4.0 2.6 165 chr2R 10005533 intron Pka-R2 - chr2R 10005616 intron Pka-R2 - chr2R 10005698 intron Pka-R2 - chr2R_13_10005001 chr2R_10005001 Sg4 724 chr2R 10005828 10005839 chr2R 10007018 10007029 1360 5 1189 13.0 5.0 9.0 0.5 1201 chr2R 10005828 intron Pka-R2 - chr2R 10006428 intron Pka-R2 - chr2R 10007029 intron Pka-R2 - chr2R_5_10005001 chr2R_10005001 Sg4 725 chr2R 10005841 10005878 chr2R 10007017 10007018 1360 16 1171 5.5 5.0 5.2 2.6 1177 chr2R 10005841 intron Pka-R2 - chr2R 10006430 intron Pka-R2 - chr2R 10007018 intron Pka-R2 - chr2R_16_10005001 chr2R_10005001 Sg4 726 chr2R 10008553 10008598 chr2R 10008656 10008711 5 107 0.0 0.0 0.0 5.0 158 chr2R 10008553 intron Pka-R2 - chr2R 10008632 intron Pka-R2 - chr2R 10008711 intron Pka-R2 - chr2R_5_10005001 chr2R_10005001 Sg4 727 chr2R 10037710 10037762 chr2R 10037814 10037866 18 104 3.5 1.5 2.5 5.1 156 chr2R 10037710 exon oys - chr2R 10037788 intron oys - chr2R 10037866 intron oys - chr2R_18_10035001 chr2R_10035001 Sg4 728 chr2R 10047803 10047830 chr2R 10047911 10047938 10 108 5.0 4.5 4.8 1.7 135 chr2R 10047803 intron oys - chr2R 10047870 intron oys - chr2R 10047938 intron oys - chr2R_10_10045001 chr2R_10045001 Sg4 729 chr2R 10053516 10053540 chr2R 10053644 10053668 10 128 6.0 4.5 5.2 1.6 152 chr2R 10053516 intron magu + chr2R 10053592 intron magu + chr2R 10053668 intron magu + chr2R_10_10050001 chr2R_10050001 Sg4 730 chr2R 10086898 10086933 chr2R 10087020 10087055 11 122 9.5 7.0 8.2 1.2 157 chr2R 10086898 intron,exon CG2269 +,sut4 - chr2R 10086976 intron,5` UTR CG2269 +,sut4 - chr2R 10087055 intron,5` UTR CG2269 +,sut4 - chr2R_11_10085001 chr2R_10085001 Sg4 731 chr2R 10122717 10122741 chr2R 10122952 10122976 8 234 4.0 1.0 2.5 2.3 259 chr2R 10122717 intergenic Ccs - chr2R 10122846 intergenic Ccs - chr2R 10122976 intergenic Ccs - chr2R_8_10120001 chr2R_10120001 Sg4 732 chr2R 10156238 10156293 chr2R 10157189 10157204 21 941 4.0 16.5 10.2 1.9 966 chr2R 10156238 intron,3` UTR KCNQ -,mlt - chr2R 10156721 intron,exon KCNQ -,mlt - chr2R 10157204 intron,exon KCNQ -,mlt - chr2R_21_10155001 chr2R_10155001 Sg4 733 chr2R 10160287 10160296 chr2R 10160629 10160638 5 342 9.5 11.0 10.2 0.4 351 chr2R 10160287 intron KCNQ - chr2R 10160462 intron KCNQ - chr2R 10160638 intron KCNQ - chr2R_5_10160001 chr2R_10160001 Sg4 734 chr2R 10162587 10162644 chr2R 10162693 10162740 26 105 4.0 4.5 4.2 5.0 153 chr2R 10162587 intron KCNQ - chr2R 10162664 intron KCNQ - chr2R 10162740 intron KCNQ - chr2R_26_10160001 chr2R_10160001 Sg4 735 chr2R 10171088 10171145 chr2R 10171197 10171254 15 109 1.5 4.5 3.0 3.8 166 chr2R 10171088 intron KCNQ - chr2R 10171171 intron KCNQ - chr2R 10171254 intron KCNQ - chr2R_15_10170001 chr2R_10170001 Sg4 736 chr2R 10176854 10176903 chr2R 10186049 10186098 roo 7 9195 4.0 4.0 4.0 1.4 9244 chr2R 10176854 intron KCNQ - chr2R 10181476 intron KCNQ - chr2R 10186098 intron KCNQ - chr2R_7_10180001 chr2R_10180001 Sg4 737 chr2R 10203615 10203659 chr2R 10203725 10203769 9 110 4.0 4.5 4.2 1.7 154 chr2R 10203615 intergenic not near genes chr2R 10203692 intergenic not near genes chr2R 10203769 intergenic not near genes chr2R_9_10200001 chr2R_10200001 Sg4 738 chr2R 10216169 10216217 chr2R 10216271 10216318 6 102 4.0 2.5 3.2 1.4 149 chr2R 10216169 intron,intron CG12912 -,Hr46 - chr2R 10216244 intron,intron CG12912 -,Hr46 - chr2R 10216318 intron,intron CG12912 -,Hr46 - chr2R_6_10215001 chr2R_10215001 Sg4 739 chr2R 10225706 10225749 chr2R 10225813 10225846 11 106 4.0 5.5 4.8 1.9 140 chr2R 10225706 intron,intron CG12912 -,Hr46 - chr2R 10225776 intron,intron CG12912 -,Hr46 - chr2R 10225846 intron,intron CG12912 -,Hr46 - chr2R_11_10225001 chr2R_10225001 Sg4 740 chr2R 10266474 10266527 chr2R 10266585 10266623 11 109 10.0 5.0 7.5 1.3 149 chr2R 10266474 intron CG12910 + chr2R 10266548 intron CG12910 + chr2R 10266623 intron CG12910 + chr2R_11_10265001 chr2R_10265001 Sg4 741 chr2R 10274800 10274814 chr2R 10274901 10274915 6 100 6.5 0.0 3.2 1.4 115 chr2R 10274800 intron CAP + chr2R 10274858 intron CAP + chr2R 10274915 intron CAP + chr2R_6_10270001 chr2R_10270001 Sg4 742 chr2R 10318498 10318522 chr2R 10318609 10318633 10 110 0.0 6.5 3.2 2.4 135 chr2R 10318498 intron Ndg + chr2R 10318566 intron Ndg + chr2R 10318633 intron Ndg + chr2R_10_10315001 chr2R_10315001 Sg4 743 chr2R 10319691 10319739 chr2R 10319808 10319856 21 117 5.5 4.5 5.0 3.5 165 chr2R 10319691 intron Ndg + chr2R 10319774 intron Ndg + chr2R 10319856 intron,3` UTR Ndg +,CG34222 - chr2R_21_10315001 chr2R_10315001 Sg4 744 chr2R 10352649 10352704 chr2R 10352751 10352806 16 102 7.5 6.0 6.8 2.1 157 chr2R 10352649 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352728 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352806 intron,exon,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R_16_10350001 chr2R_10350001 Sg4 745 chr2R 10376124 10376138 chr2R 10376498 10376512 5 374 0.0 5.0 2.5 1.4 388 chr2R 10376124 intron CG42732 - chr2R 10376318 intron CG42732 - chr2R 10376512 intron CG42732 - chr2R_5_10375001 chr2R_10375001 Sg4 746 chr2R 10387977 10388001 chr2R 10388099 10388123 5 122 0.0 15.0 7.5 0.6 146 chr2R 10387977 intron CG42732 - chr2R 10388050 intron CG42732 - chr2R 10388123 intron CG42732 - chr2R_5_10385001 chr2R_10385001 Sg4 747 chr2R 10409037 10409076 chr2R 10409139 10409177 7 101 0.0 3.0 1.5 2.8 140 chr2R 10409037 intron CG42732 - chr2R 10409107 intron CG42732 - chr2R 10409177 intron,exon CG42732 -,CG33477 - chr2R_7_10405001 chr2R_10405001 Sg4 748 chr2R 10454097 10454125 chr2R 10454174 10454227 11 90 6.0 3.0 4.5 2.0 130 chr2R 10454097 intron,intron Galphao +,Cyp49a1 - chr2R 10454162 intron,intron Galphao +,Cyp49a1 - chr2R 10454227 intron,intron Galphao +,Cyp49a1 - chr2R_11_10450001 chr2R_10450001 Sg4 749 chr2R 10484192 10484228 chr2R 10532056 10532092 6 47864 19.5 24.0 21.8 0.3 47900 chr2R 10484192 exon,exon pre-lola-G -,lola - chr2R 10508142 intron lola - chr2R 10532092 exon lola - chr2R_6_10505001 chr2R_10505001 Sg4 750 chr2R 10533436 10533479 chr2R 10533578 10533621 6 142 32.0 34.5 33.2 0.2 185 chr2R 10533436 exon lola - chr2R 10533528 intron lola - chr2R 10533621 exon lola - chr2R_6_10530001 chr2R_10530001 Sg4 751 chr2R 10622331 10622341 chr2R 10637120 10637130 mdg1 4 14789 6.5 6.5 6.5 0.5 14799 chr2R 10622331 intron CG11883 + chr2R 10629730 intron CG11883 + chr2R 10637130 intron CG11883 + chr2R_4_10625001 chr2R_10625001 Sg4 752 chr2R 10644033 10644084 chr2R 10644136 10644187 18 103 5.0 0.0 2.5 5.1 154 chr2R 10644033 intron Git - chr2R 10644110 intron Git - chr2R 10644187 intron Git - chr2R_18_10640001 chr2R_10640001 Sg4 753 chr2R 10678463 10678523 chr2R 10678592 10678634 11 121 5.5 4.0 4.8 1.9 171 chr2R 10678463 intron stan + chr2R 10678548 intron stan + chr2R 10678634 intron stan + chr2R_11_10675001 chr2R_10675001 Sg4 754 chr2R 10691086 10691131 chr2R 10691191 10691235 14 105 1.5 5.5 3.5 3.1 149 chr2R 10691086 intron stan + chr2R 10691160 intron stan + chr2R 10691235 intron stan + chr2R_14_10690001 chr2R_10690001 Sg4 755 chr2R 10720262 10720317 chr2R 10720362 10720418 11 101 4.0 6.0 5.0 1.8 156 chr2R 10720262 3` UTR stan + chr2R 10720340 3` UTR stan + chr2R 10720418 3` UTR stan + chr2R_11_10720001 chr2R_10720001 Sg4 756 chr2R 10782729 10782782 chr2R 10782836 10782874 20 104 3.5 8.0 5.8 2.9 145 chr2R 10782729 intron CG33144 - chr2R 10782802 intron CG33144 - chr2R 10782874 intron CG33144 - chr2R_20_10780001 chr2R_10780001 Sg4 757 chr2R 10790123 10790175 chr2R 10790236 10790288 9 112 2.0 6.5 4.2 1.7 165 chr2R 10790123 intron CG33144 - chr2R 10790206 intron CG33144 - chr2R 10790288 intron CG33144 - chr2R_9_10790001 chr2R_10790001 Sg4 758 chr2R 10794887 10794943 chr2R 10794990 10795046 9 102 2.5 4.0 3.2 2.1 159 chr2R 10794887 intron CG33144 - chr2R 10794966 intron CG33144 - chr2R 10795046 intron CG33144 - chr2R_9_10790001 chr2R_10790001 Sg4 759 chr2R 10924556 10924559 chr2R 10924653 10924661 5 101 0.0 9.5 4.8 0.9 105 chr2R 10924556 intergenic not near genes chr2R 10924608 intergenic not near genes chr2R 10924661 intergenic not near genes chr2R_5_10920001 chr2R_10920001 Sg4 760 chr2R 10947070 10947076 chr2R 10947182 10947188 6 112 8.0 0.0 4.0 1.2 118 chr2R 10947070 5` UTR CR45228 + chr2R 10947129 intergenic CR45228 + chr2R 10947188 intergenic CR45228 + chr2R_6_10945001 chr2R_10945001 Sg4 761 chr2R 10948026 10948062 chr2R 10955591 10955623 17.6 17 7572 0.0 7.5 3.8 3.5 7597 chr2R 10948026 intergenic not near genes chr2R 10951824 intergenic not near genes chr2R 10955623 intergenic not near genes chr2R_17_10950001 chr2R_10950001 Sg4 762 chr2R 11009793 11009839 chr2R 11018991 11019028 roo 7 9197 4.5 4.0 4.2 1.3 9235 chr2R 11009793 intron luna - chr2R 11014410 intron luna - chr2R 11019028 intron luna - chr2R_7_11010001 chr2R_11010001 Sg4 763 chr2R 11019860 11019888 chr2R 11024951 11024979 jockey 7 5089 7.5 3.5 5.5 1.1 5119 chr2R 11019860 intron luna - chr2R 11022420 intron luna - chr2R 11024979 intron luna - chr2R_7_11020001 chr2R_11020001 Sg4 764 chr2R 11019897 11019911 chr2R 11024943 11024944 jockey 5 5066 4.0 2.5 3.2 1.2 5047 chr2R 11019897 intron luna - chr2R 11022420 intron luna - chr2R 11024944 intron luna - chr2R_5_11020001 chr2R_11020001 Sg4 765 chr2R 11134092 11134140 chr2R 11134358 11134406 pogo 9 266 2.5 4.0 3.2 2.1 314 chr2R 11134092 intergenic not near genes chr2R 11134249 intergenic not near genes chr2R 11134406 intergenic not near genes chr2R_9_11130001 chr2R_11130001 Sg4 766 chr2R 11179250 11179285 chr2R 11179361 11179396 5 109 0.0 9.0 4.5 0.9 146 chr2R 11179250 intron shn + chr2R 11179323 intron shn + chr2R 11179396 intron shn + chr2R_5_11175001 chr2R_11175001 Sg4 767 chr2R 11202678 11202716 chr2R 11202840 11202869 5 161 27.5 22.0 24.8 0.2 191 chr2R 11202678 intron shn + chr2R 11202774 intron shn + chr2R 11202869 intron shn + chr2R_5_11200001 chr2R_11200001 Sg4 768 chr2R 11207794 11207843 chr2R 11208011 11208060 BS 10 216 5.0 3.5 4.2 1.9 266 chr2R 11207794 intron shn + chr2R 11207927 intron shn + chr2R 11208060 intron shn + chr2R_10_11205001 chr2R_11205001 Sg4 769 chr2R 11253213 11253264 chr2R 11253314 11253355 29 98 9.0 6.0 7.5 3.4 142 chr2R 11253213 intron Cpr47Ea - chr2R 11253284 intron Cpr47Ea - chr2R 11253355 intron Cpr47Ea - chr2R_29_11250001 chr2R_11250001 Sg4 770 chr2R 11262175 11262223 chr2R 11262288 11262336 20 105 4.5 6.0 5.2 3.2 161 chr2R 11262175 intergenic Cpr47Ed - chr2R 11262256 intergenic Cpr47Ed - chr2R 11262336 intergenic not near genes chr2R_20_11260001 chr2R_11260001 Sg4 771 chr2R 11276780 11276819 chr2R 11276973 11276992 10 190 3.5 4.5 4.0 2.0 212 chr2R 11276780 intergenic not near genes chr2R 11276886 intergenic not near genes chr2R 11276992 intergenic not near genes chr2R_10_11275001 chr2R_11275001 Sg4 772 chr2R 11297614 11297639 chr2R 11301960 11301985 flea 10 4346 4.5 2.5 3.5 2.2 4371 chr2R 11297614 intergenic CG42336 - chr2R 11299800 intergenic not near genes chr2R 11301985 5` UTR CG7741 + chr2R_10_11295001 chr2R_11295001 Sg4 773 chr2R 11344145 11344181 chr2R 11344266 11344298 6 120 0.0 9.5 4.8 1.0 153 chr2R 11344145 intergenic alphaTry - chr2R 11344222 intergenic alphaTry - chr2R 11344298 3` UTR alphaTry - chr2R_6_11340001 chr2R_11340001 Sg4 774 chr2R 11388250 11388297 chr2R 11388453 11388500 6 203 15.5 15.0 15.2 0.4 250 chr2R 11388250 intron,exon sprt -,CG30022 - chr2R 11388375 intron,5` UTR sprt -,CG30022 - chr2R 11388500 intron,5` UTR sprt -,CG30022 - chr2R_6_11385001 chr2R_11385001 Sg4 775 chr2R 11415506 11415549 chr2R 11418679 11418723 opus 19 3170 7.0 7.0 7.0 2.4 3217 chr2R 11415506 intron Drip - chr2R 11417114 intron Drip - chr2R 11418723 intron Drip - chr2R_19_11415001 chr2R_11415001 Sg4 776 chr2R 11472625 11472635 chr2R 11473847 11473857 pogo 11 1222 13.0 5.5 9.2 1.1 1232 chr2R 11472625 intergenic not near genes chr2R 11473241 intergenic not near genes chr2R 11473857 intergenic not near genes chr2R_11_11470001 chr2R_11470001 Sg4 777 chr2R 11472636 11472679 chr2R 11473846 11473901 pogo 14 1220 6.5 5.5 6.0 2.0 1265 chr2R 11472636 intergenic not near genes chr2R 11473268 intergenic not near genes chr2R 11473901 intergenic not near genes chr2R_14_11470001 chr2R_11470001 Sg4 778 chr2R 11480785 11480811 chr2R 11480893 11480919 6 108 0.0 3.5 1.8 2.1 134 chr2R 11480785 intron inv + chr2R 11480852 intron inv + chr2R 11480919 intron inv + chr2R_6_11480001 chr2R_11480001 Sg4 779 chr2R 11587854 11587874 chr2R 11680014 11680034 5 92161 31.0 17.5 24.2 0.2 92180 chr2R 11587854 exon tou - chr2R 11633944 intron CG9005 - chr2R 11680034 intron Buffy + chr2R_5_11630001 chr2R_11630001 Sg4 780 chr2R 12080057 12080102 chr2R 12082494 12082539 6 2437 11.0 14.0 12.5 0.4 2482 chr2R 12080057 intergenic not near genes chr2R 12081298 5` UTR CG13186 + chr2R 12082539 intergenic CG13186 + chr2R_6_12080001 chr2R_12080001 Sg4 781 chr2R 12707505 12707532 chr2R 12715884 12715923 roo 6 8389 5.0 2.0 3.5 1.3 8418 chr2R 12707505 intron CG42663 + chr2R 12711714 intron CG42663 + chr2R 12715923 intron CG42663 + chr2R_6_12710001 chr2R_12710001 Sg4 782 chr2R 12789274 12789327 chr2R 12797656 12797714 roo 17 8383 4.5 3.0 3.8 3.5 8440 chr2R 12789274 intron,3` UTR sca +,CR45137 - chr2R 12793494 intron,intron sca +,CR45137 - chr2R 12797714 intron,3` UTR sca +,CR45137 - chr2R_17_12790001 chr2R_12790001 Sg4 783 chr2R 12988256 12988422 chr2R 12988393 12988551 5 124 0.0 0.0 0.0 5.0 295 chr2R 12988256 intergenic not near genes chr2R 12988404 intergenic not near genes chr2R 12988551 intergenic not near genes chr2R_5_12985001 chr2R_12985001 Sg4 784 chr2R 13089055 13089106 chr2R 13089209 13089263 10 157 2.0 1.5 1.8 3.6 208 chr2R 13089055 intergenic not near genes chr2R 13089159 intergenic not near genes chr2R 13089263 intergenic not near genes chr2R_10_13085001 chr2R_13085001 Sg4 785 chr2R 13125686 13125699 chr2R 13125794 13125807 4 108 3.0 3.5 3.2 1.0 121 chr2R 13125686 exon CG13325 + chr2R 13125746 3` UTR CG13325 + chr2R 13125807 intergenic CG13325 + chr2R_4_13125001 chr2R_13125001 Sg4 786 chr2R 13136821 13136862 chr2R 13141644 13141685 Doc 24 4823 5.0 8.5 6.8 3.1 4864 chr2R 13136821 exon Cap-G + chr2R 13139253 intron Cap-G + chr2R 13141685 intron Cap-G + chr2R_24_13135001 chr2R_13135001 Sg4 787 chr2R 13194827 13194850 chr2R 13194949 13194972 10 120 25.5 12.5 19.0 0.5 145 chr2R 13194827 intergenic not near genes chr2R 13194900 intergenic not near genes chr2R 13194972 intergenic not near genes chr2R_10_13190001 chr2R_13190001 Sg4 788 chr2R 13309647 13309682 chr2R 13309790 13309825 8 143 1.0 2.0 1.5 3.2 178 chr2R 13309647 intergenic not near genes chr2R 13309736 intergenic not near genes chr2R 13309825 intergenic not near genes chr2R_8_13305001 chr2R_13305001 Sg4 789 chr2R 13348607 13348652 chr2R 13349563 13349609 8 955 19.5 18.5 19.0 0.4 1002 chr2R 13348607 intron CR44206 - chr2R 13349108 intron CR44206 - chr2R 13349609 intron CR44206 - chr2R_8_13345001 chr2R_13345001 Sg4 790 chr2R 13428184 13428228 chr2R 13428915 13428957 6 730 21.5 17.0 19.2 0.3 773 chr2R 13428184 intron CG42321 - chr2R 13428570 intron CG42321 - chr2R 13428957 intron CG42321 - chr2R_6_13425001 chr2R_13425001 Sg4 791 chr2R 13934495 13934525 chr2R 13938865 13938895 6 4368 14.5 13.0 13.8 0.4 4400 chr2R 13934495 intron shot - chr2R 13936695 intron shot - chr2R 13938895 intron shot - chr2R_6_13935001 chr2R_13935001 Sg4 792 chr2R 14050834 14050845 chr2R 14050948 14050959 10 113 9.5 13.5 11.5 0.8 125 chr2R 14050834 intron mam + chr2R 14050896 intron mam + chr2R 14050959 intron mam + chr2R_10_14050001 chr2R_14050001 Sg4 793 chr2R 14135482 14135523 chr2R 14135780 14135831 10 304 6.0 4.5 5.2 1.6 349 chr2R 14135482 intron Prosap - chr2R 14135656 intron Prosap - chr2R 14135831 intron Prosap - chr2R_10_14135001 chr2R_14135001 Sg4 794 chr2R 14141936 14141942 chr2R 14142066 14142072 4 130 4.5 9.0 6.8 0.5 136 chr2R 14141936 intergenic not near genes chr2R 14142004 intergenic not near genes chr2R 14142072 intergenic not near genes chr2R_4_14140001 chr2R_14140001 Sg4 795 chr2R 14142419 14142474 chr2R 14142534 14142589 10 115 5.5 1.0 3.2 2.4 170 chr2R 14142419 intergenic not near genes chr2R 14142504 intergenic not near genes chr2R 14142589 intergenic not near genes chr2R_10_14140001 chr2R_14140001 Sg4 796 chr2R 14248251 14248303 chr2R 14248677 14248729 4 426 16.0 27.5 21.8 0.2 478 chr2R 14248251 intron Mdr50 + chr2R 14248490 exon Mdr50 + chr2R 14248729 intron Mdr50 + chr2R_4_14245001 chr2R_14245001 Sg4 797 chr2R 14277554 14277607 chr2R 14277661 14277714 17 106 5.0 3.0 4.0 3.4 160 chr2R 14277554 5` UTR Ih + chr2R 14277634 5` UTR Ih + chr2R 14277714 5` UTR Ih + chr2R_17_14275001 chr2R_14275001 Sg4 798 chr2R 14285032 14285046 chr2R 14285144 14285168 8 121 3.0 2.0 2.5 2.3 136 chr2R 14285032 intron Ih + chr2R 14285100 intron Ih + chr2R 14285168 intron Ih + chr2R_8_14285001 chr2R_14285001 Sg4 799 chr2R 14290268 14290325 chr2R 14290385 14290421 13 112 4.0 3.0 3.5 2.9 153 chr2R 14290268 intron Ih + chr2R 14290344 intron Ih + chr2R 14290421 intron Ih + chr2R_13_14290001 chr2R_14290001 Sg4 800 chr2R 14300400 14300451 chr2R 14301553 14301608 18 1156 3.0 5.0 4.0 3.6 1208 chr2R 14300400 intron tej - chr2R 14301004 exon tej - chr2R 14301608 intron tej - chr2R_18_14300001 chr2R_14300001 Sg4 801 chr2R 14357541 14357576 chr2R 14357656 14357691 6 112 2.0 2.5 2.2 1.9 150 chr2R 14357541 intergenic CG8617 -,Arc1 - chr2R 14357616 intergenic Arc1 -,CG8617 - chr2R 14357691 intergenic Arc1 -,CG8617 - chr2R_6_14355001 chr2R_14355001 Sg4 802 chr2R 14394208 14394222 chr2R 14399022 14399036 Doc 6 4814 8.5 1.5 5.0 1.0 4828 chr2R 14394208 intergenic not near genes chr2R 14396622 intergenic not near genes chr2R 14399036 intergenic not near genes chr2R_6_14395001 chr2R_14395001 Sg4 803 chr2R 14467289 14467325 chr2R 14476472 14476503 roo 13 9182 1.0 4.5 2.8 3.4 9214 chr2R 14467289 intergenic not near genes chr2R 14471896 intergenic not near genes chr2R 14476503 5` UTR CR44462 + chr2R_13_14470001 chr2R_14470001 Sg4 804 chr2R 14497368 14497405 chr2R 14498559 14498596 1360 9 1191 3.5 6.0 4.8 1.6 1228 chr2R 14497368 3` UTR Cpsf160 - chr2R 14497982 intron Cpsf160 - chr2R 14498596 3` UTR Cpsf160 - chr2R_9_14495001 chr2R_14495001 Sg4 805 chr2R 14514457 14514493 chr2R 14514578 14514626 5 126 1.0 3.5 2.2 1.6 169 chr2R 14514457 intron,intron Cpr51A -,CG30197 + chr2R 14514542 intron,intron Cpr51A -,CG30197 + chr2R 14514626 intron,intron Cpr51A -,CG30197 + chr2R_5_14510001 chr2R_14510001 Sg4 806 chr2R 14565536 14565589 chr2R 14565638 14565692 6 102 4.5 3.0 3.8 1.2 156 chr2R 14565536 intron ttv + chr2R 14565614 intron ttv + chr2R 14565692 intron ttv + chr2R_6_14565001 chr2R_14565001 Sg4 807 chr2R 14610229 14610279 chr2R 14610339 14610396 16 113 4.5 3.5 4.0 3.2 167 chr2R 14610229 exon Su(var)2-HP2 - chr2R 14610312 exon Su(var)2-HP2 - chr2R 14610396 exon Su(var)2-HP2 - chr2R_16_14610001 chr2R_14610001 Sg4 808 chr2R 14722286 14722301 chr2R 14722415 14722430 5 128 7.0 8.0 7.5 0.6 144 chr2R 14722286 intergenic not near genes chr2R 14722358 intergenic not near genes chr2R 14722430 intergenic not near genes chr2R_5_14720001 chr2R_14720001 Sg4 809 chr2R 14748842 14748851 chr2R 14748966 14748975 7 124 4.5 3.5 4.0 1.4 133 chr2R 14748842 intergenic AttB + chr2R 14748908 intergenic AttB + chr2R 14748975 intergenic AttB + chr2R_7_14745001 chr2R_14745001 Sg4 810 chr2R 14855009 14855034 chr2R 14855126 14855151 4 117 8.5 0.5 4.5 0.7 142 chr2R 14855009 5` UTR Ciao1 - chr2R 14855080 intergenic Ciao1 -,HPS1 + chr2R 14855151 intergenic Ciao1 -,HPS1 + chr2R_4_14855001 chr2R_14855001 Sg4 811 chr2R 14889186 14889211 chr2R 14897819 14897844 Max-element 8 8633 5.0 0.0 2.5 2.3 8658 chr2R 14889186 intergenic Cyp6a8 - chr2R 14893515 intergenic not near genes chr2R 14897844 intergenic not near genes chr2R_8_14890001 chr2R_14890001 Sg4 812 chr2R 14911683 14911703 chr2R 14911831 14911851 5 148 5.5 2.5 4.0 1.0 168 chr2R 14911683 intron CG10249 - chr2R 14911767 intron CG10249 - chr2R 14911851 intron CG10249 - chr2R_5_14910001 chr2R_14910001 Sg4 813 chr2R 14917825 14917880 chr2R 14917935 14917990 20 109 4.5 6.0 5.2 3.2 165 chr2R 14917825 intron CG10249 - chr2R 14917908 intron CG10249 - chr2R 14917990 intron CG10249 - chr2R_20_14915001 chr2R_14915001 Sg4 814 chr2R 14922121 14922173 chr2R 14922222 14922271 14 98 5.5 1.5 3.5 3.1 150 chr2R 14922121 intron CG10249 - chr2R 14922196 intron CG10249 - chr2R 14922271 intron CG10249 - chr2R_14_14920001 chr2R_14920001 Sg4 815 chr2R 14987361 14987414 chr2R 14987530 14987583 4 169 2.5 1.5 2.0 1.3 222 chr2R 14987361 intron pcs + chr2R 14987472 intron pcs + chr2R 14987583 intron pcs + chr2R_4_14985001 chr2R_14985001 Sg4 816 chr2R 15004708 15004748 chr2R 15005057 15005102 jockey 14 353 4.0 4.0 4.0 2.8 394 chr2R 15004708 intergenic not near genes chr2R 15004905 intergenic not near genes chr2R 15005102 intergenic not near genes chr2R_14_15000001 chr2R_15000001 Sg4 817 chr2R 15012782 15012838 chr2R 15012893 15012949 12 111 2.0 3.0 2.5 3.4 167 chr2R 15012782 intron hbs + chr2R 15012866 intron hbs + chr2R 15012949 intron hbs + chr2R_12_15010001 chr2R_15010001 Sg4 818 chr2R 15015434 15015488 chr2R 15022883 15022933 mdg1 7 7446 2.5 5.5 4.0 1.4 7499 chr2R 15015434 intron hbs + chr2R 15019184 intron hbs + chr2R 15022933 intron hbs + chr2R_7_15015001 chr2R_15015001 Sg4 819 chr2R 15054752 15054763 chr2R 15054834 15054865 4 94 7.0 7.5 7.2 0.5 113 chr2R 15054752 intergenic not near genes chr2R 15054808 intergenic not near genes chr2R 15054865 intergenic not near genes chr2R_4_15050001 chr2R_15050001 Sg4 820 chr2R 15084953 15084996 chr2R 15092027 15092070 297 8 7074 7.0 3.5 5.2 1.3 7117 chr2R 15084953 intergenic not near genes chr2R 15088512 intergenic not near genes chr2R 15092070 5` UTR CR44457 + chr2R_8_15085001 chr2R_15085001 Sg4 821 chr2R 15092389 15092435 chr2R 15092496 15092540 12 113 0.5 1.5 1.0 6.0 151 chr2R 15092389 5` UTR CR44457 + chr2R 15092464 intergenic CR44457 + chr2R 15092540 intergenic CR44457 + chr2R_12_15090001 chr2R_15090001 Sg4 822 chr2R 15119299 15119341 chr2R 15127798 15127847 Tirant 14 8503 7.0 4.5 5.8 2.1 8548 chr2R 15119299 intron chn + chr2R 15123573 intron chn + chr2R 15127847 intron chn + chr2R_14_15120001 chr2R_15120001 Sg4 823 chr2R 15168251 15168296 chr2R 15168369 15168409 13 118 5.0 3.0 4.0 2.6 158 chr2R 15168251 intron igl + chr2R 15168330 intron igl + chr2R 15168409 intron igl + chr2R_13_15165001 chr2R_15165001 Sg4 824 chr2R 15196072 15196123 chr2R 15196193 15196244 11 120 4.5 2.0 3.2 2.6 172 chr2R 15196072 intergenic not near genes chr2R 15196158 intergenic not near genes chr2R 15196244 intergenic not near genes chr2R_11_15195001 chr2R_15195001 Sg4 825 chr2R 15230369 15230375 chr2R 15230671 15230677 4 302 14.0 0.0 7.0 0.5 308 chr2R 15230369 intron,5` UTR Fs -,CR44370 + chr2R 15230523 intron,5` UTR Fs -,CR44370 + chr2R 15230677 intron,5` UTR Fs -,CR44370 + chr2R_4_15230001 chr2R_15230001 Sg4 826 chr2R 15259051 15259077 chr2R 15259160 15259179 4 107 4.0 2.0 3.0 1.0 128 chr2R 15259051 intron ItgalphaPS4 + chr2R 15259115 intron ItgalphaPS4 + chr2R 15259179 intron ItgalphaPS4 + chr2R_4_15255001 chr2R_15255001 Sg4 827 chr2R 15295835 15295890 chr2R 15296007 15296061 20 171 2.5 3.0 2.8 5.3 226 chr2R 15295835 intron Trpm - chr2R 15295948 intron Trpm - chr2R 15296061 intron Trpm - chr2R_20_15295001 chr2R_15295001 Sg4 828 chr2R 15296139 15296148 chr2R 15296247 15296256 4 108 9.5 3.0 6.2 0.6 117 chr2R 15296139 intron Trpm - chr2R 15296198 intron Trpm - chr2R 15296256 intron Trpm - chr2R_4_15295001 chr2R_15295001 Sg4 829 chr2R 15296151 15296173 chr2R 15296244 15296281 13 103 4.0 3.0 3.5 2.9 130 chr2R 15296151 intron Trpm - chr2R 15296216 intron Trpm - chr2R 15296281 intron Trpm - chr2R_13_15295001 chr2R_15295001 Sg4 830 chr2R 15374790 15375055 chr2R 15374897 15375190 5 119 8.0 3.5 5.8 0.7 400 chr2R 15374790 intergenic not near genes chr2R 15374990 intergenic not near genes chr2R 15375190 intergenic not near genes chr2R_5_15370001 chr2R_15370001 Sg4 831 chr2R 15404092 15404121 chr2R 15404215 15404226 5 112 5.5 4.0 4.8 0.9 134 chr2R 15404092 intron CG43729 + chr2R 15404159 intron CG43729 + chr2R 15404226 intron CG43729 + chr2R_5_15400001 chr2R_15400001 Sg4 832 chr2R 15471564 15471609 chr2R 15471694 15471739 15 131 45.0 34.0 39.5 0.4 175 chr2R 15471564 3` UTR CG43729 + chr2R 15471652 3` UTR CG43729 + chr2R 15471739 3` UTR CG43729 + chr2R_15_15470001 chr2R_15470001 Sg4 833 chr2R 15534654 15534693 chr2R 15534758 15534797 7 104 2.0 3.0 2.5 2.0 143 chr2R 15534654 intron CG30471 + chr2R 15534726 intron CG30471 + chr2R 15534797 intron CG30471 + chr2R_7_15530001 chr2R_15530001 Sg4 834 chr2R 15785277 15785322 chr2R 15806539 15806584 6 21264 27.5 30.5 29.0 0.2 21307 chr2R 15785277 intron Zasp52 - chr2R 15795930 intron,intron Zasp52 -,tun + chr2R 15806584 intron,intron Zasp52 -,tun + chr2R_6_15795001 chr2R_15795001 Sg4 835 chr2R 15828127 15828156 chr2R 15828312 15828341 6 185 0.0 3.5 1.8 2.1 214 chr2R 15828127 intron,intron tun +,Poxn - chr2R 15828234 intron,intron tun +,Poxn - chr2R 15828341 intron,intron tun +,Poxn - chr2R_6_15825001 chr2R_15825001 Sg4 836 chr2R 15845135 15845184 chr2R 15845239 15845288 4 104 1.0 3.5 2.2 1.2 153 chr2R 15845135 intron,intron tun +,CG8249 - chr2R 15845212 intron,intron tun +,CG8249 - chr2R 15845288 intron,intron tun +,CG8249 - chr2R_4_15845001 chr2R_15845001 Sg4 837 chr2R 15869320 15869369 chr2R 15869425 15869474 7 105 3.5 2.5 3.0 1.8 154 chr2R 15869320 intergenic Rif1 -,sli - chr2R 15869397 intergenic sli -,Rif1 - chr2R 15869474 intergenic sli -,Rif1 - chr2R_7_15865001 chr2R_15865001 Sg4 838 chr2R 15891794 15891836 chr2R 15891895 15891937 5 101 3.0 3.0 3.0 1.2 143 chr2R 15891794 intron sli - chr2R 15891866 intron sli - chr2R 15891937 intron sli - chr2R_5_15890001 chr2R_15890001 Sg4 839 chr2R 15898856 15898906 chr2R 15898979 15899029 11 122 3.5 3.5 3.5 2.4 173 chr2R 15898856 intron sli - chr2R 15898942 intron sli - chr2R 15899029 intron sli - chr2R_11_15895001 chr2R_15895001 Sg4 840 chr2R 15951835 15951860 chr2R 15951936 15951958 10 100 0.5 13.0 6.8 1.3 123 chr2R 15951835 intron Strn-Mlck - chr2R 15951896 intron Strn-Mlck - chr2R 15951958 intron Strn-Mlck - chr2R_10_15950001 chr2R_15950001 Sg4 841 chr2R 16033329 16033376 chr2R 16033442 16033489 7 113 2.5 4.0 3.2 1.7 160 chr2R 16033329 intron SP2353 + chr2R 16033409 intron SP2353 + chr2R 16033489 intron SP2353 + chr2R_7_16030001 chr2R_16030001 Sg4 842 chr2R 16054938 16054961 chr2R 16055041 16055069 11 105 9.0 7.0 8.0 1.2 131 chr2R 16054938 intron CG8405 + chr2R 16055004 intron CG8405 + chr2R 16055069 intron CG8405 + chr2R_11_16055001 chr2R_16055001 Sg4 843 chr2R 16380111 16380137 chr2R 16380220 16380260 7 121 2.5 1.0 1.8 2.5 149 chr2R 16380111 5` UTR,3` UTR CR45316 +,CR45317 - chr2R 16380186 3` UTR CR45317 - chr2R 16380260 intergenic CR45317 -,CR45316 +,CG43187 + chr2R_7_16380001 chr2R_16380001 Sg4 844 chr2R 16392299 16392323 chr2R 16392408 16392432 5 109 5.0 3.0 4.0 1.0 133 chr2R 16392299 intron Sema-2b + chr2R 16392366 intron Sema-2b + chr2R 16392432 intron Sema-2b + chr2R_5_16390001 chr2R_16390001 Sg4 845 chr2R 16521476 16521517 chr2R 16521583 16521624 9 106 0.5 6.0 3.2 2.1 148 chr2R 16521476 intron Sema-2a + chr2R 16521550 intron Sema-2a + chr2R 16521624 intron Sema-2a + chr2R_9_16520001 chr2R_16520001 Sg4 846 chr2R 16538067 16538083 chr2R 16538186 16538202 4 119 5.0 3.0 4.0 0.8 135 chr2R 16538067 intergenic not near genes chr2R 16538134 intergenic not near genes chr2R 16538202 intergenic not near genes chr2R_4_16535001 chr2R_16535001 Sg4 847 chr2R 16539617 16539659 chr2R 16544851 16544893 copia 8 5233 3.5 3.5 3.5 1.8 5276 chr2R 16539617 intergenic not near genes chr2R 16542255 intergenic not near genes chr2R 16544893 intergenic not near genes chr2R_8_16540001 chr2R_16540001 Sg4 848 chr2R 16554088 16554137 chr2R 16554465 16554514 10 375 3.5 2.5 3.0 2.5 426 chr2R 16554088 intron Syn2 + chr2R 16554301 intron Syn2 + chr2R 16554514 intron Syn2 + chr2R_10_16550001 chr2R_16550001 Sg4 849 chr2R 16571848 16571905 chr2R 16571968 16572025 14 120 0.5 1.0 0.8 7.8 177 chr2R 16571848 intergenic CG4927 + chr2R 16571936 intergenic CG4927 + chr2R 16572025 intergenic CG4927 + chr2R_14_16570001 chr2R_16570001 Sg4 850 chr2R 16586855 16586908 chr2R 16586958 16587011 5 103 6.0 3.5 4.8 0.9 156 chr2R 16586855 intergenic RpLP2 +,CG8311 - chr2R 16586933 intergenic CG8311 -,RpLP2 + chr2R 16587011 intergenic CG8311 -,RpLP2 + chr2R_5_16585001 chr2R_16585001 Sg4 851 chr2R 16593549 16593590 chr2R 16593769 16593810 12 220 2.5 2.0 2.2 3.8 261 chr2R 16593549 intron CG8306 - chr2R 16593680 intron CG8306 - chr2R 16593810 intron CG8306 - chr2R_12_16590001 chr2R_16590001 Sg4 852 chr2R 16689131 16689176 chr2R 16689485 16689530 12 347 3.0 3.0 3.0 3.0 399 chr2R 16689131 intron CG30463 - chr2R 16689330 intron CG30463 - chr2R 16689530 intron CG30463 - chr2R_12_16685001 chr2R_16685001 Sg4 853 chr2R 16701706 16701727 chr2R 16701839 16701860 4 133 3.5 0.0 1.8 1.4 154 chr2R 16701706 intron CG30463 - chr2R 16701783 intron CG30463 - chr2R 16701860 intron CG30463 - chr2R_4_16700001 chr2R_16700001 Sg4 854 chr2R 16732603 16732648 chr2R 16732715 16732760 12 111 2.0 2.0 2.0 4.0 157 chr2R 16732603 5` UTR CG30463 - chr2R 16732682 5` UTR CG30463 - chr2R 16732760 5` UTR CG30463 - chr2R_12_16730001 chr2R_16730001 Sg4 855 chr2R 16737114 16737159 chr2R 16737237 16737284 21 124 6.5 5.0 5.8 3.1 170 chr2R 16737114 3` UTR CG43104 - chr2R 16737199 3` UTR CG43104 - chr2R 16737284 exon CG43104 - chr2R_21_16735001 chr2R_16735001 Sg4 856 chr2R 16782297 16782541 chr2R 16782420 16782424 10 120 21.0 14.5 17.8 0.5 127 chr2R 16782297 exon resilin + chr2R 16782360 exon resilin + chr2R 16782424 exon resilin + chr2R_10_16780001 chr2R_16780001 Sg4 857 chr2R 16938222 16938254 chr2R 16938584 16938614 9 361 2.5 3.5 3.0 2.2 392 chr2R 16938222 intron Pkc53E + chr2R 16938418 intron Pkc53E + chr2R 16938614 intron Pkc53E + chr2R_9_16935001 chr2R_16935001 Sg4 858 chr2R 17090708 17090747 chr2R 17090822 17090861 21 113 5.5 6.0 5.8 3.1 153 chr2R 17090708 intron Sply - chr2R 17090784 intron Sply - chr2R 17090861 intron Sply - chr2R_21_17090001 chr2R_17090001 Sg4 859 chr2R 17101037 17101084 chr2R 17101222 17101269 20 184 6.0 5.0 5.5 3.1 232 chr2R 17101037 intron CG30456 + chr2R 17101153 intron CG30456 + chr2R 17101269 intron CG30456 + chr2R_20_17100001 chr2R_17100001 Sg4 860 chr2R 17102677 17102732 chr2R 17102780 17102835 21 103 11.0 10.5 10.8 1.8 158 chr2R 17102677 5` UTR CG30456 + chr2R 17102756 5` UTR CG30456 + chr2R 17102835 5` UTR CG30456 + chr2R_21_17100001 chr2R_17100001 Sg4 861 chr2R 17083033 17083063 chr2R 17115740 17115770 10 32707 32.0 27.5 29.8 0.3 32737 chr2R 17083033 intron CG30460 - chr2R 17099402 intergenic not near genes chr2R 17115770 intergenic not near genes chr2R_10_17095001 chr2R_17095001 Sg4 862 chr2R 17147221 17147258 chr2R 17152277 17152314 jockey 10 5056 5.0 5.5 5.2 1.6 5093 chr2R 17147221 intergenic not near genes chr2R 17149768 intergenic not near genes chr2R 17152314 intergenic not near genes chr2R_10_17145001 chr2R_17145001 Sg4 863 chr2R 17183454 17183460 chr2R 17183572 17183578 4 118 1.0 3.5 2.2 1.2 124 chr2R 17183454 intergenic not near genes chr2R 17183516 intergenic not near genes chr2R 17183578 intergenic not near genes chr2R_4_17180001 chr2R_17180001 Sg4 864 chr2R 17226412 17226463 chr2R 17226781 17226826 9 368 3.5 4.0 3.8 1.9 414 chr2R 17226412 intron mbl + chr2R 17226619 intron mbl + chr2R 17226826 intron mbl + chr2R_9_17225001 chr2R_17225001 Sg4 865 chr2R 17250668 17250717 chr2R 17250777 17250826 10 108 0.5 2.5 1.5 4.0 158 chr2R 17250668 intron mbl + chr2R 17250747 intron mbl + chr2R 17250826 intron mbl + chr2R_10_17250001 chr2R_17250001 Sg4 866 chr2R 17259107 17259161 chr2R 17259250 17259302 6 143 0.0 1.0 0.5 4.0 195 chr2R 17259107 intron mbl + chr2R 17259204 intron mbl + chr2R 17259302 intron mbl + chr2R_6_17255001 chr2R_17255001 Sg4 867 chr2R 17389252 17389302 chr2R 17389367 17389409 17 113 5.0 9.5 7.2 2.1 157 chr2R 17389252 intergenic CR44344 - chr2R 17389330 intergenic CR44344 - chr2R 17389409 intergenic CR44344 - chr2R_17_17385001 chr2R_17385001 Sg4 868 chr2R 17470334 17470354 chr2R 17470439 17470461 7 108 0.0 2.0 1.0 3.5 127 chr2R 17470334 intron qkr54B + chr2R 17470398 intron qkr54B + chr2R 17470461 intron qkr54B + chr2R_7_17470001 chr2R_17470001 Sg4 869 chr2R 17485899 17485947 chr2R 17490694 17490740 F-element 14 4794 3.0 2.5 2.8 3.7 4841 chr2R 17485899 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17488320 intron NT5E-2 + chr2R 17490740 intron NT5E-2 + chr2R_14_17485001 chr2R_17485001 Sg4 870 chr2R 17627723 17627782 chr2R 17628075 17628134 15 351 3.0 4.0 3.5 3.3 411 chr2R 17627723 intron CG10936 - chr2R 17627928 intron CG10936 - chr2R 17628134 intron CG10936 - chr2R_15_17625001 chr2R_17625001 Sg4 871 chr2R 17655207 17655233 chr2R 17655276 17655335 7 82 4.5 3.0 3.8 1.5 128 chr2R 17655207 intron CCHa1-R - chr2R 17655271 intron CCHa1-R - chr2R 17655335 intron CCHa1-R - chr2R_7_17655001 chr2R_17655001 Sg4 872 chr2R 17703182 17703240 chr2R 17703287 17703345 11 105 2.5 3.0 2.8 2.9 163 chr2R 17703182 intron Uhg1 + chr2R 17703264 5` UTR Uhg1 + chr2R 17703345 3` UTR CG6424 - chr2R_11_17700001 chr2R_17700001 Sg4 873 chr2R 17709664 17709957 chr2R 17709774 17710073 6 112 5.5 3.5 4.5 1.1 409 chr2R 17709664 intron CG6424 - chr2R 17709868 intron CG6424 - chr2R 17710073 intron CG6424 - chr2R_6_17705001 chr2R_17705001 Sg4 874 chr2R 17782341 17782392 chr2R 17783569 17783620 pogo 10 1228 1.0 0.5 0.8 5.6 1279 chr2R 17782341 intergenic CG33981 -,fab1 - chr2R 17782980 intergenic not near genes chr2R 17783620 intergenic mir-31a - chr2R_10_17780001 chr2R_17780001 Sg4 875 chr2R 17784006 17784012 chr2R 17784270 17784276 pogo 4 264 12.5 9.5 11.0 0.3 270 chr2R 17784006 intergenic mir-31a - chr2R 17784141 intergenic mir-31a - chr2R 17784276 intergenic mir-31a - chr2R_4_17780001 chr2R_17780001 Sg4 876 chr2R 17784016 17784054 chr2R 17784268 17784312 pogo 14 261 7.0 9.5 8.2 1.5 296 chr2R 17784016 intergenic mir-31a - chr2R 17784164 intergenic mir-31a - chr2R 17784312 intergenic mir-31a - chr2R_14_17780001 chr2R_17780001 Sg4 877 chr2R 17860149 17860199 chr2R 17860256 17860306 5 107 0.0 2.0 1.0 2.5 157 chr2R 17860149 3` UTR olf186-F + chr2R 17860228 3` UTR olf186-F + chr2R 17860306 3` UTR olf186-F + chr2R_5_17860001 chr2R_17860001 Sg4 878 chr2R 17921435 17921456 chr2R 17921542 17921563 9 107 2.0 2.0 2.0 3.0 128 chr2R 17921435 intron Elk + chr2R 17921499 intron Elk + chr2R 17921563 intron Elk + chr2R_9_17920001 chr2R_17920001 Sg4 879 chr2R 17938904 17938925 chr2R 17938997 17939021 6 92 3.5 4.0 3.8 1.2 117 chr2R 17938904 intergenic not near genes chr2R 17938962 intergenic not near genes chr2R 17939021 intergenic not near genes chr2R_6_17935001 chr2R_17935001 Sg4 880 chr2R 18033611 18033662 chr2R 18033766 18033818 12 152 2.0 3.0 2.5 3.4 207 chr2R 18033611 intergenic not near genes chr2R 18033714 intergenic not near genes chr2R 18033818 intergenic not near genes chr2R_12_18030001 chr2R_18030001 Sg4 881 chr2R 18045647 18045697 chr2R 18046024 18046074 jockey 8 377 2.0 1.0 1.5 3.2 427 chr2R 18045647 intergenic not near genes chr2R 18045860 intergenic not near genes chr2R 18046074 intergenic CG5767 - chr2R_8_18045001 chr2R_18045001 Sg4 882 chr2R 18111690 18111707 chr2R 18115583 18115600 F-element 4 3893 2.5 7.0 4.8 0.7 3910 chr2R 18111690 intergenic not near genes chr2R 18113645 intergenic not near genes chr2R 18115600 intergenic not near genes chr2R_4_18110001 chr2R_18110001 Sg4 883 chr2R 18219607 18219656 chr2R 18219714 18219763 11 107 4.5 2.5 3.5 2.4 156 chr2R 18219607 intergenic not near genes chr2R 18219685 intergenic not near genes chr2R 18219763 intergenic not near genes chr2R_11_18215001 chr2R_18215001 Sg4 884 chr2R 18308267 18308317 chr2R 18308398 18308448 10 131 3.5 2.0 2.8 2.6 181 chr2R 18308267 intron sbb - chr2R 18308358 intron sbb - chr2R 18308448 intron sbb - chr2R_10_18305001 chr2R_18305001 Sg4 885 chr2R 18358151 18358160 chr2R 18358260 18358269 4 109 4.5 10.0 7.2 0.5 118 chr2R 18358151 intergenic not near genes chr2R 18358210 intergenic not near genes chr2R 18358269 intergenic not near genes chr2R_4_18355001 chr2R_18355001 Sg4 886 chr2R 18390864 18390888 chr2R 18390977 18391001 4 113 1.0 1.0 1.0 2.0 137 chr2R 18390864 intergenic CG15068 - chr2R 18390932 intergenic CG15068 - chr2R 18391001 intergenic CG15068 - chr2R_4_18390001 chr2R_18390001 Sg4 887 chr2R 18398137 18398190 chr2R 18398257 18398309 10 119 1.5 0.5 1.0 5.0 172 chr2R 18398137 intron GstE10 - chr2R 18398223 intron GstE10 - chr2R 18398309 intron GstE10 - chr2R_10_18395001 chr2R_18395001 Sg4 888 chr2R 18408258 18408314 chr2R 18408404 18408460 17 146 4.0 2.0 3.0 4.2 202 chr2R 18408258 exon GstE8 + chr2R 18408359 exon GstE8 + chr2R 18408460 exon GstE8 + chr2R_17_18405001 chr2R_18405001 Sg4 889 chr2R 18487814 18487852 chr2R 18495290 18495347 blood 9 7477 0.5 5.5 3.0 2.2 7533 chr2R 18487814 intron CG30116 - chr2R 18491580 intron CG30116 - chr2R 18495347 intron CG30116 - chr2R_9_18490001 chr2R_18490001 Sg4 890 chr2R 18528178 18528215 chr2R 18528278 18528312 13 98 4.5 4.0 4.2 2.5 134 chr2R 18528178 intron CG10924 + chr2R 18528245 intron CG10924 + chr2R 18528312 intron CG10924 + chr2R_13_18525001 chr2R_18525001 Sg4 891 chr2R 18547624 18547668 chr2R 18547725 18547763 10 103 2.0 3.5 2.8 2.6 139 chr2R 18547624 3` UTR Rgk2 + chr2R 18547694 3` UTR Rgk2 + chr2R 18547763 3` UTR Rgk2 + chr2R_10_18545001 chr2R_18545001 Sg4 892 chr2R 18575808 18575826 chr2R 18581988 18582039 3S18 6 6191 2.5 5.5 4.0 1.2 6231 chr2R 18575808 intron GEFmeso - chr2R 18578924 intron GEFmeso - chr2R 18582039 intron GEFmeso - chr2R_6_18575001 chr2R_18575001 Sg4 893 chr2R 18590882 18590897 chr2R 18600035 18600039 roo 7 9168 2.5 7.5 5.0 1.2 9157 chr2R 18590882 intron GEFmeso - chr2R 18595460 intron GEFmeso - chr2R 18600039 intron GEFmeso - chr2R_7_18595001 chr2R_18595001 Sg4 894 chr2R 18609931 18609964 chr2R 18611554 18611586 10 1623 3.5 1.5 2.5 2.9 1655 chr2R 18609931 intron GEFmeso - chr2R 18610758 5` UTR GEFmeso - chr2R 18611586 5` UTR GEFmeso - chr2R_10_18610001 chr2R_18610001 Sg4 895 chr2R 18646387 18646436 chr2R 18646556 18646606 13 169 2.5 5.5 4.0 2.6 219 chr2R 18646387 intron SP2637 - chr2R 18646496 intron SP2637 - chr2R 18646606 intron SP2637 - chr2R_13_18645001 chr2R_18645001 Sg4 896 chr2R 18707029 18707063 chr2R 18707755 18707799 5 734 20.0 26.0 23.0 0.2 770 chr2R 18707029 intron CG15073 + chr2R 18707414 exon CG15073 + chr2R 18707799 exon CG15073 + chr2R_5_18705001 chr2R_18705001 Sg4 897 chr2R 18769628 18769733 chr2R 18769914 18769965 8 252 0.0 3.5 1.8 2.9 337 chr2R 18769628 intron Mctp + chr2R 18769796 intron Mctp + chr2R 18769965 intron Mctp + chr2R_8_18765001 chr2R_18765001 Sg4 898 chr2R 18785897 18785942 chr2R 18786001 18786046 14 103 7.5 5.0 6.2 1.9 149 chr2R 18785897 intron CG15080 + chr2R 18785972 intron CG15080 + chr2R 18786046 intron CG15080 + chr2R_14_18785001 chr2R_18785001 Sg4 899 chr2R 18863291 18863349 chr2R 18863398 18863456 27 105 3.5 4.0 3.8 5.6 165 chr2R 18863291 intergenic CG43069 + chr2R 18863374 intergenic CG43069 + chr2R 18863456 intergenic CG43069 +,CG43070 + chr2R_27_18860001 chr2R_18860001 Sg4 900 chr2R 18871632 18871678 chr2R 18871737 18871781 14 105 4.0 1.5 2.8 3.7 149 chr2R 18871632 intergenic not near genes chr2R 18871706 intergenic not near genes chr2R 18871781 intergenic not near genes chr2R_14_18870001 chr2R_18870001 Sg4 901 chr2R 18926480 18926520 chr2R 18926592 18926632 9 112 3.0 0.0 1.5 3.6 152 chr2R 18926480 intron sano + chr2R 18926556 intron sano + chr2R 18926632 intron sano + chr2R_9_18925001 chr2R_18925001 Sg4 902 chr2R 18953153 18953186 chr2R 18953265 18953298 8 112 1.0 4.5 2.8 2.1 145 chr2R 18953153 intron sano + chr2R 18953226 intron sano + chr2R 18953298 intron sano + chr2R_8_18950001 chr2R_18950001 Sg4 903 chr2R 18964904 18964949 chr2R 18965005 18965050 15 100 4.0 3.0 3.5 3.3 146 chr2R 18964904 intergenic not near genes chr2R 18964977 intergenic not near genes chr2R 18965050 intergenic not near genes chr2R_15_18960001 chr2R_18960001 Sg4 904 chr2R 18991996 18992049 chr2R 18992162 18992215 15 165 0.5 3.0 1.8 5.4 219 chr2R 18991996 intron tn + chr2R 18992106 intron tn + chr2R 18992215 intron tn + chr2R_15_18990001 chr2R_18990001 Sg4 905 chr2R 19007078 19007133 chr2R 19007203 19007248 14 121 3.0 1.5 2.2 4.4 170 chr2R 19007078 intron tn + chr2R 19007163 intron tn + chr2R 19007248 intron tn + chr2R_14_19005001 chr2R_19005001 Sg4 906 chr2R 19012947 19012965 chr2R 19013035 19013082 7 114 3.0 3.0 3.0 1.8 135 chr2R 19012947 intergenic not near genes chr2R 19013014 intergenic not near genes chr2R 19013082 intergenic not near genes chr2R_7_19010001 chr2R_19010001 Sg4 907 chr2R 19026032 19026061 chr2R 19026158 19026187 6 126 5.5 2.5 4.0 1.2 155 chr2R 19026032 intron 5-HT1B - chr2R 19026110 intron 5-HT1B - chr2R 19026187 intron 5-HT1B - chr2R_6_19025001 chr2R_19025001 Sg4 908 chr2R 19222103 19222135 chr2R 19222544 19222597 11 459 3.5 3.5 3.5 2.4 494 chr2R 19222103 intron hppy + chr2R 19222350 intron hppy + chr2R 19222597 intron hppy + chr2R_11_19220001 chr2R_19220001 Sg4 909 chr2R 19250613 19250658 chr2R 19250798 19250843 7 185 19.5 14.0 16.8 0.4 230 chr2R 19250613 exon wbl + chr2R 19250728 exon wbl + chr2R 19250843 3` UTR wbl + chr2R_7_19250001 chr2R_19250001 Sg4 910 chr2R 19528093 19528122 chr2R 19528195 19528224 5 101 1.5 0.5 1.0 2.5 131 chr2R 19528093 3` UTR sm - chr2R 19528158 3` UTR sm - chr2R 19528224 3` UTR sm - chr2R_5_19525001 chr2R_19525001 Sg4 911 chr2R 19535072 19535127 chr2R 19535314 19535369 7 242 2.5 2.5 2.5 2.0 297 chr2R 19535072 intron sm - chr2R 19535220 intron sm - chr2R 19535369 intron sm - chr2R_7_19535001 chr2R_19535001 Sg4 912 chr2R 19537124 19537173 chr2R 19537238 19537274 18 109 3.0 0.0 1.5 7.2 150 chr2R 19537124 intron sm - chr2R 19537199 intron sm - chr2R 19537274 intron sm - chr2R_18_19535001 chr2R_19535001 Sg4 913 chr2R 19539725 19539758 chr2R 19539864 19539888 6 136 6.0 3.5 4.8 1.0 163 chr2R 19539725 intron sm - chr2R 19539806 intron sm - chr2R 19539888 intron sm - chr2R_6_19535001 chr2R_19535001 Sg4 914 chr2R 19641760 19641792 chr2R 19641890 19641922 6 129 0.5 2.5 1.5 2.4 162 chr2R 19641760 intergenic not near genes chr2R 19641841 intergenic not near genes chr2R 19641922 intergenic not near genes chr2R_6_19640001 chr2R_19640001 Sg4 915 chr2R 19715831 19715857 chr2R 19723325 19723351 blood 9 7493 8.5 9.0 8.8 0.9 7520 chr2R 19715831 intergenic not near genes chr2R 19719591 intergenic not near genes chr2R 19723351 intergenic not near genes chr2R_9_19715001 chr2R_19715001 Sg4 916 chr2R 19776572 19776617 chr2R 19779920 19779965 jockey 15 3348 5.0 5.0 5.0 2.5 3393 chr2R 19776572 intergenic not near genes chr2R 19778268 intergenic not near genes chr2R 19779965 intergenic not near genes chr2R_15_19775001 chr2R_19775001 Sg4 917 chr2R 19914825 19914870 chr2R 19922262 19922307 mdg1 5 7435 9.5 4.5 7.0 0.6 7482 chr2R 19914825 intergenic not near genes chr2R 19918566 intergenic not near genes chr2R 19922307 intergenic not near genes chr2R_5_19915001 chr2R_19915001 Sg4 918 chr2R 19943281 19943289 chr2R 19943388 19943399 4 109 0.5 6.5 3.5 0.9 118 chr2R 19943281 intergenic not near genes chr2R 19943340 intergenic not near genes chr2R 19943399 intergenic not near genes chr2R_4_19940001 chr2R_19940001 Sg4 919 chr2R 19957407 19957461 chr2R 19962634 19962688 copia 10 5226 4.0 2.0 3.0 2.5 5281 chr2R 19957407 intergenic CG44623 + chr2R 19960048 intergenic not near genes chr2R 19962688 intergenic not near genes chr2R_10_19960001 chr2R_19960001 Sg4 920 chr2R 20027568 20027601 chr2R 20027651 20027708 4 101 15.0 17.0 16.0 0.2 140 chr2R 20027568 intergenic not near genes chr2R 20027638 intergenic not near genes chr2R 20027708 intergenic not near genes chr2R_4_20025001 chr2R_20025001 Sg4 921 chr2R 20069229 20069274 chr2R 20071884 20071929 opus 14 2654 3.5 4.5 4.0 2.8 2700 chr2R 20069229 intergenic not near genes chr2R 20070579 intergenic not near genes chr2R 20071929 intergenic not near genes chr2R_14_20070001 chr2R_20070001 Sg4 922 chr2R 20079815 20079871 chr2R 20079916 20079958 7 102 0.5 2.0 1.2 3.2 143 chr2R 20079815 intergenic not near genes chr2R 20079886 intergenic not near genes chr2R 20079958 intergenic not near genes chr2R_7_20075001 chr2R_20075001 Sg4 923 chr2R 20118848 20118904 chr2R 20118961 20118977 14 110 2.0 2.5 2.2 4.4 129 chr2R 20118848 intergenic not near genes chr2R 20118912 intergenic not near genes chr2R 20118977 intergenic not near genes chr2R_14_20115001 chr2R_20115001 Sg4 924 chr2R 20125728 20125748 chr2R 20125829 20125849 7 101 3.5 8.0 5.8 1.0 121 chr2R 20125728 intergenic not near genes chr2R 20125788 intergenic not near genes chr2R 20125849 intergenic not near genes chr2R_7_20125001 chr2R_20125001 Sg4 925 chr2R 20142424 20142465 chr2R 20142528 20142566 7 104 1.0 3.0 2.0 2.3 142 chr2R 20142424 intergenic not near genes chr2R 20142495 intergenic not near genes chr2R 20142566 intergenic not near genes chr2R_7_20140001 chr2R_20140001 Sg4 926 chr2R 20161901 20161907 chr2R 20161999 20162010 6 102 0.0 10.5 5.2 1.0 109 chr2R 20161901 intergenic not near genes chr2R 20161956 intergenic not near genes chr2R 20162010 intergenic not near genes chr2R_6_20160001 chr2R_20160001 Sg4 927 chr2R 20337168 20337223 chr2R 20337282 20337336 10 114 3.0 3.5 3.2 2.4 168 chr2R 20337168 intergenic not near genes chr2R 20337252 intergenic not near genes chr2R 20337336 intergenic not near genes chr2R_10_20335001 chr2R_20335001 Sg4 928 chr2R 20415618 20415661 chr2R 20415723 20415766 9 105 2.5 2.5 2.5 2.6 148 chr2R 20415618 intergenic not near genes chr2R 20415692 intergenic not near genes chr2R 20415766 intergenic not near genes chr2R_9_20415001 chr2R_20415001 Sg4 929 chr2R 20523021 20523071 chr2R 20523157 20523205 25 134 5.0 7.0 6.0 3.6 184 chr2R 20523021 intergenic not near genes chr2R 20523113 intergenic not near genes chr2R 20523205 intergenic not near genes chr2R_25_20520001 chr2R_20520001 Sg4 930 chr2R 20572547 20572587 chr2R 20572661 20572702 8 112 4.5 3.5 4.0 1.6 155 chr2R 20572547 intron qsm - chr2R 20572624 intron qsm - chr2R 20572702 intron qsm - chr2R_8_20570001 chr2R_20570001 Sg4 931 chr2R 20590649 20590669 chr2R 20590752 20590773 6 104 1.5 5.0 3.2 1.4 124 chr2R 20590649 intron bl + chr2R 20590711 intron bl + chr2R 20590773 intron bl + chr2R_6_20590001 chr2R_20590001 Sg4 932 chr2R 20616918 20616943 chr2R 20617026 20617051 5 108 4.5 1.5 3.0 1.2 133 chr2R 20616918 intron Hil - chr2R 20616984 intron Hil - chr2R 20617051 intron Hil - chr2R_5_20615001 chr2R_20615001 Sg4 933 chr2R 20667341 20667347 chr2R 20667478 20667483 4 137 11.5 12.0 11.8 0.3 142 chr2R 20667341 intergenic Fem-1 -,exu - chr2R 20667412 intergenic exu -,Fem-1 - chr2R 20667483 3` UTR exu - chr2R_4_20665001 chr2R_20665001 Sg4 934 chr2R 20739418 20739472 chr2R 20744211 20744265 F-element 15 4793 5.5 1.5 3.5 3.3 4847 chr2R 20739418 intron dpr + chr2R 20741842 intron dpr + chr2R 20744265 intron dpr + chr2R_15_20740001 chr2R_20740001 Sg4 935 chr2R 20783287 20783322 chr2R 20788084 20788119 F-element 6 4796 2.5 4.5 3.5 1.3 4832 chr2R 20783287 intergenic not near genes chr2R 20785703 intergenic not near genes chr2R 20788119 intergenic CG43666 - chr2R_6_20785001 chr2R_20785001 Sg4 936 chr2R 20817503 20817515 chr2R 20818033 20818045 7 528 7.5 4.5 6.0 1.0 542 chr2R 20817503 intergenic not near genes chr2R 20817774 intergenic not near genes chr2R 20818045 intergenic not near genes chr2R_7_20815001 chr2R_20815001 Sg4 937 chr2R 20865689 20865742 chr2R 20865797 20865850 7 108 1.5 3.0 2.2 2.2 161 chr2R 20865689 intron CG15227 + chr2R 20865770 intron CG15227 + chr2R 20865850 intron CG15227 + chr2R_7_20865001 chr2R_20865001 Sg4 938 chr2R 20962885 20962937 chr2R 20963004 20963060 23 123 3.5 4.0 3.8 4.8 175 chr2R 20962885 intergenic not near genes chr2R 20962972 intergenic not near genes chr2R 20963060 intergenic not near genes chr2R_23_20960001 chr2R_20960001 Sg4 939 chr2R 21034260 21034299 chr2R 21034398 21034436 7 137 4.5 2.5 3.5 1.6 176 chr2R 21034260 intergenic not near genes chr2R 21034348 intergenic not near genes chr2R 21034436 intergenic not near genes chr2R_7_21030001 chr2R_21030001 Sg4 940 chr2R 21045640 21045692 chr2R 21045963 21046015 10 323 1.0 4.0 2.5 2.9 375 chr2R 21045640 intergenic not near genes chr2R 21045828 intergenic not near genes chr2R 21046015 intergenic not near genes chr2R_10_21045001 chr2R_21045001 Sg4 941 chr2R 21064689 21064734 chr2R 21093140 21093185 5 28451 16.5 20.5 18.5 0.3 28496 chr2R 21064689 exon Cht12 - chr2R 21078937 intron Treh + chr2R 21093185 intron CG34396 + chr2R_5_21075001 chr2R_21075001 Sg4 942 chr2R 21141106 21141150 chr2R 21141227 21141271 9 120 1.0 1.5 1.2 4.1 165 chr2R 21141106 intron Magi - chr2R 21141188 intron Magi - chr2R 21141271 intron Magi - chr2R_9_21140001 chr2R_21140001 Sg4 943 chr2R 21180546 21180600 chr2R 21180758 21180812 12 212 4.5 3.5 4.0 2.4 266 chr2R 21180546 intron Pu + chr2R 21180679 intron Pu + chr2R 21180812 intron Pu + chr2R_12_21180001 chr2R_21180001 Sg4 944 chr2R 21188197 21188250 chr2R 21188303 21188356 5 106 4.0 2.0 3.0 1.2 159 chr2R 21188197 exon tud + chr2R 21188276 intron tud + chr2R 21188356 intron tud + chr2R_5_21185001 chr2R_21185001 Sg4 945 chr2R 21232620 21232660 chr2R 21232815 21232855 4 195 5.5 0.0 2.8 1.1 235 chr2R 21232620 intron ASPP - chr2R 21232738 intron ASPP - chr2R 21232855 intron ASPP - chr2R_4_21230001 chr2R_21230001 Sg4 946 chr2R 21259640 21259664 chr2R 21259744 21259768 10 101 6.0 7.0 6.5 1.3 128 chr2R 21259640 intron Rgk3 + chr2R 21259704 intron Rgk3 + chr2R 21259768 intron Rgk3 + chr2R_10_21255001 chr2R_21255001 Sg4 947 chr2R 21322916 21322969 chr2R 21323025 21323078 25 106 6.5 4.5 5.5 3.8 162 chr2R 21322916 5` UTR CG30394 - chr2R 21322997 5` UTR CG30394 - chr2R 21323078 intron CG30394 - chr2R_25_21320001 chr2R_21320001 Sg4 948 chr2R 21412680 21412731 chr2R 21415614 21415665 11 2934 6.0 4.5 5.2 1.8 2985 chr2R 21412680 intron Sdc - chr2R 21414172 intron Sdc - chr2R 21415665 intron Sdc - chr2R_11_21410001 chr2R_21410001 Sg4 949 chr2R 21421313 21421352 chr2R 21421417 21421456 7 103 5.5 6.5 6.0 1.0 143 chr2R 21421313 intron Sdc - chr2R 21421384 intron Sdc - chr2R 21421456 intron Sdc - chr2R_7_21420001 chr2R_21420001 Sg4 950 chr2R 21522036 21522079 chr2R 21522191 21522238 7 158 3.0 3.0 3.0 1.8 202 chr2R 21522036 intergenic CG30289 -,Egfr + chr2R 21522137 intergenic Egfr +,CG30289 - chr2R 21522238 intergenic Egfr +,CG30289 - chr2R_7_21520001 chr2R_21520001 Sg4 951 chr2R 21546765 21546813 chr2R 21546871 21546919 5 93 6.5 6.0 6.2 0.7 154 chr2R 21546765 intron Egfr + chr2R 21546842 intron Egfr + chr2R 21546919 intron Egfr + chr2R_5_21545001 chr2R_21545001 Sg4 952 chr2R 21592826 21592852 chr2R 21592934 21592960 9 107 11.0 8.5 9.8 0.8 134 chr2R 21592826 intergenic not near genes chr2R 21592893 intergenic not near genes chr2R 21592960 intergenic not near genes chr2R_9_21590001 chr2R_21590001 Sg4 953 chr2R 21593558 21593607 chr2R 21594283 21594331 20 727 8.0 7.5 7.8 2.3 773 chr2R 21593558 intergenic not near genes chr2R 21593944 intergenic not near genes chr2R 21594331 intergenic not near genes chr2R_20_21590001 chr2R_21590001 Sg4 954 chr2R 21665584 21665613 chr2R 21665931 21665960 6 347 3.0 3.0 3.0 1.5 376 chr2R 21665584 3` UTR,exon CG42362 +,CG42363 + chr2R 21665772 3` UTR,3` UTR CG42362 +,CG42363 + chr2R 21665960 3` UTR,3` UTR,exon CG42362 +,CG42363 +,CG42364 + chr2R_6_21665001 chr2R_21665001 Sg4 955 chr2R 21700131 21700173 chr2R 21700242 21700284 15 109 5.5 4.5 5.0 2.5 153 chr2R 21700131 intron HmgZ - chr2R 21700208 intron HmgZ - chr2R 21700284 intron HmgZ - chr2R_15_21700001 chr2R_21700001 Sg4 956 chr2R 21721551 21721606 chr2R 21721664 21721719 14 113 3.5 2.0 2.8 3.7 168 chr2R 21721551 intron LBR + chr2R 21721635 intron LBR + chr2R 21721719 intron LBR + chr2R_14_21720001 chr2R_21720001 Sg4 957 chr2R 21738283 21738306 chr2R 21747448 21747491 roo 10 9172 1.5 5.0 3.2 2.4 9208 chr2R 21738283 intergenic not near genes chr2R 21742887 intergenic not near genes chr2R 21747491 intergenic not near genes chr2R_10_21740001 chr2R_21740001 Sg4 958 chr2R 21753061 21753108 chr2R 21753571 21753618 roo 9 510 2.5 5.5 4.0 1.8 557 chr2R 21753061 intergenic not near genes chr2R 21753340 intergenic not near genes chr2R 21753618 intergenic not near genes chr2R_9_21750001 chr2R_21750001 Sg4 959 chr2R 21785521 21785540 chr2R 21785624 21785642 4 103 0.0 6.5 3.2 1.0 121 chr2R 21785521 intergenic not near genes chr2R 21785582 intergenic not near genes chr2R 21785642 intergenic not near genes chr2R_4_21785001 chr2R_21785001 Sg4 960 chr2R 21796433 21796483 chr2R 21796541 21796591 16 108 3.0 4.0 3.5 3.6 158 chr2R 21796433 5` UTR CG34204 + chr2R 21796512 5` UTR CG34204 + chr2R 21796591 exon CG34204 + chr2R_16_21795001 chr2R_21795001 Sg4 961 chr2R 21809502 21809544 chr2R 21817767 21817809 roo 13 8264 6.0 3.0 4.5 2.4 8307 chr2R 21809502 intergenic not near genes chr2R 21813656 intergenic not near genes chr2R 21817809 intergenic not near genes chr2R_13_21810001 chr2R_21810001 Sg4 962 chr2R 21839979 21839990 chr2R 21840095 21840106 5 116 14.0 2.0 8.0 0.6 127 chr2R 21839979 intergenic not near genes chr2R 21840042 intergenic not near genes chr2R 21840106 intergenic not near genes chr2R_5_21840001 chr2R_21840001 Sg4 963 chr2R 21857321 21857360 chr2R 21857437 21857476 11 115 6.5 2.5 4.5 2.0 155 chr2R 21857321 intergenic not near genes chr2R 21857398 intergenic not near genes chr2R 21857476 intergenic not near genes chr2R_11_21855001 chr2R_21855001 Sg4 964 chr2R 21889282 21889307 chr2R 21889530 21889555 6 248 9.0 0.0 4.5 1.1 273 chr2R 21889282 intron Fili + chr2R 21889418 intron Fili + chr2R 21889555 intron Fili + chr2R_6_21885001 chr2R_21885001 Sg4 965 chr2R 21906245 21906303 chr2R 21906372 21906414 13 125 4.5 4.5 4.5 2.4 169 chr2R 21906245 intron Fili + chr2R 21906330 intron Fili + chr2R 21906414 intron Fili + chr2R_13_21905001 chr2R_21905001 Sg4 966 chr2R 21911811 21911859 chr2R 21911943 21911991 10 132 5.0 5.0 5.0 1.7 180 chr2R 21911811 intron Fili + chr2R 21911901 intron Fili + chr2R 21911991 intron Fili + chr2R_10_21910001 chr2R_21910001 Sg4 967 chr2R 21955163 21955174 chr2R 21955292 21955304 4 130 0.0 5.5 2.8 1.1 141 chr2R 21955163 intergenic CG13494 - chr2R 21955234 intergenic CG13494 - chr2R 21955304 intergenic CG13494 - chr2R_4_21955001 chr2R_21955001 Sg4 968 chr2R 21963180 21963219 chr2R 21963289 21963304 5 100 2.5 2.5 2.5 1.4 124 chr2R 21963180 intergenic not near genes chr2R 21963242 intergenic not near genes chr2R 21963304 intergenic not near genes chr2R_5_21960001 chr2R_21960001 Sg4 969 chr2R 22003066 22003110 chr2R 22003174 22003221 15 109 2.0 0.0 1.0 7.5 155 chr2R 22003066 intron CG34370 - chr2R 22003144 intron CG34370 - chr2R 22003221 intron CG34370 - chr2R_15_22000001 chr2R_22000001 Sg4 970 chr2R 22012970 22013007 chr2R 22013090 22013127 14 120 2.5 3.0 2.8 3.7 157 chr2R 22012970 intron CG34370 - chr2R 22013048 intron CG34370 - chr2R 22013127 intron CG34370 - chr2R_14_22010001 chr2R_22010001 Sg4 971 chr2R 22033802 22033858 chr2R 22033912 22033969 13 109 1.0 4.0 2.5 3.7 167 chr2R 22033802 intron CG34370 - chr2R 22033886 intron CG34370 - chr2R 22033969 intron CG34370 - chr2R_13_22030001 chr2R_22030001 Sg4 972 chr2R 22048826 22048849 chr2R 22049061 22049084 5 235 3.5 3.5 3.5 1.1 258 chr2R 22048826 intergenic not near genes chr2R 22048955 intergenic not near genes chr2R 22049084 intergenic not near genes chr2R_5_22045001 chr2R_22045001 Sg4 973 chr2R 22349672 22349684 chr2R 22351481 22351483 jockey 6 1807 14.0 6.5 10.2 0.5 1811 chr2R 22349672 intron Liprin-gamma - chr2R 22350578 intron Liprin-gamma - chr2R 22351483 intron Liprin-gamma - chr2R_6_22350001 chr2R_22350001 Sg4 974 chr2R 22349687 22349712 chr2R 22351476 22351521 jockey 4 1804 10.5 6.0 8.2 0.4 1834 chr2R 22349687 intron Liprin-gamma - chr2R 22350604 intron Liprin-gamma - chr2R 22351521 intron Liprin-gamma - chr2R_4_22350001 chr2R_22350001 Sg4 975 chr2R 22360363 22360371 chr2R 22360821 22360829 jockey 4 458 12.0 5.5 8.8 0.4 466 chr2R 22360363 intron Liprin-gamma - chr2R 22360596 intron Liprin-gamma - chr2R 22360829 intron Liprin-gamma - chr2R_4_22360001 chr2R_22360001 Sg4 976 chr2R 22374614 22374624 chr2R 22374726 22374736 5 112 7.5 3.0 5.2 0.8 122 chr2R 22374614 3` UTR CR44759 - chr2R 22374675 3` UTR CR44759 - chr2R 22374736 3` UTR CR44759 - chr2R_5_22370001 chr2R_22370001 Sg4 977 chr2R 22377785 22377840 chr2R 22377896 22377949 11 109 2.0 1.5 1.8 3.9 164 chr2R 22377785 3` UTR Rtf1 + chr2R 22377867 3` UTR Rtf1 + chr2R 22377949 3` UTR Rtf1 + chr2R_11_22375001 chr2R_22375001 Sg4 978 chr2R 22460362 22460404 chr2R 22460466 22460508 14 104 4.0 5.5 4.8 2.4 146 chr2R 22460362 intron CG10384 + chr2R 22460435 intron CG10384 + chr2R 22460508 intron CG10384 + chr2R_14_22460001 chr2R_22460001 Sg4 979 chr2R 22477552 22477609 chr2R 22477682 22477739 21 128 6.5 2.5 4.5 3.8 187 chr2R 22477552 intergenic CG45063 - chr2R 22477646 intergenic CG45063 - chr2R 22477739 intergenic CG45063 - chr2R_21_22475001 chr2R_22475001 Sg4 980 chr2R 22503854 22503897 chr2R 22503974 22504016 6 119 0.5 4.0 2.2 1.9 162 chr2R 22503854 intron px - chr2R 22503935 intron px - chr2R 22504016 intron px - chr2R_6_22500001 chr2R_22500001 Sg4 981 chr2R 22525732 22525773 chr2R 22529312 22529353 jockey 13 3579 3.5 6.0 4.8 2.2 3621 chr2R 22525732 intron px - chr2R 22527542 intron px - chr2R 22529353 intron px - chr2R_13_22525001 chr2R_22525001 Sg4 982 chr2R 22545600 22545645 chr2R 22545704 22545749 14 104 2.0 3.5 2.8 3.7 149 chr2R 22545600 intron px - chr2R 22545674 intron px - chr2R 22545749 intron px - chr2R_14_22545001 chr2R_22545001 Sg4 983 chr2R 22568857 22568910 chr2R 22569087 22569140 9 228 2.0 3.5 2.8 2.4 283 chr2R 22568857 intron dnr1 - chr2R 22568998 intron dnr1 - chr2R 22569140 intron dnr1 - chr2R_9_22565001 chr2R_22565001 Sg4 984 chr2R 22575710 22575760 chr2R 22576129 22576179 12 417 3.5 3.0 3.2 2.9 469 chr2R 22575710 intron dnr1 - chr2R 22575944 intron dnr1 - chr2R 22576179 intron dnr1 - chr2R_12_22575001 chr2R_22575001 Sg4 985 chr2R 22580429 22580443 chr2R 22586604 22586618 diver 5 6175 0.0 3.0 1.5 2.0 6189 chr2R 22580429 intron dnr1 - chr2R 22583524 intron dnr1 - chr2R 22586618 intron dnr1 - chr2R_5_22580001 chr2R_22580001 Sg4 986 chr2R 22588128 22588157 chr2R 22588248 22588277 8 120 9.0 8.5 8.8 0.8 149 chr2R 22588128 intron dnr1 - chr2R 22588202 intron dnr1 - chr2R 22588277 intron dnr1 - chr2R_8_22585001 chr2R_22585001 Sg4 987 chr2R 22596229 22596243 chr2R 22596326 22596347 4 102 3.5 4.5 4.0 0.8 118 chr2R 22596229 3` UTR CG3927 + chr2R 22596288 3` UTR CG3927 + chr2R 22596347 3` UTR CG3927 + chr2R_4_22595001 chr2R_22595001 Sg4 988 chr2R 22620805 22620858 chr2R 22620930 22620983 16 124 2.0 2.0 2.0 5.3 178 chr2R 22620805 5` UTR CG33143 + chr2R 22620894 5` UTR CG33143 + chr2R 22620983 5` UTR CG33143 + chr2R_16_22620001 chr2R_22620001 Sg4 989 chr2R 22623431 22623481 chr2R 22623596 22623646 22 164 3.5 3.5 3.5 4.9 215 chr2R 22623431 intron CG33143 + chr2R 22623538 intron CG33143 + chr2R 22623646 intron CG33143 + chr2R_22_22620001 chr2R_22620001 Sg4 990 chr2R 22663109 22663156 chr2R 22663214 22663261 13 105 4.5 1.0 2.8 3.4 152 chr2R 22663109 3` UTR CG42566 + chr2R 22663185 3` UTR CG42566 + chr2R 22663261 intergenic CG42566 +,CG4250 + chr2R_13_22660001 chr2R_22660001 Sg4 991 chr2R 22756527 22756577 chr2R 22756629 22756679 24 102 6.0 4.5 5.2 3.9 152 chr2R 22756527 intron,intron CG42260 -,CR30267 + chr2R 22756603 intron,intron CG42260 -,CR30267 + chr2R 22756679 intron,intron CG42260 -,CR30267 + chr2R_24_22755001 chr2R_22755001 Sg4 992 chr2R 22774950 22774991 chr2R 22775394 22775435 jockey 10 444 6.5 4.5 5.5 1.5 485 chr2R 22774950 intron CG42260 - chr2R 22775192 intron CG42260 - chr2R 22775435 intron CG42260 - chr2R_10_22775001 chr2R_22775001 Sg4 993 chr2R 22780627 22780677 chr2R 22780758 22780808 15 131 2.5 2.0 2.2 4.7 181 chr2R 22780627 intron CG42260 - chr2R 22780718 intron CG42260 - chr2R 22780808 intron CG42260 - chr2R_15_22780001 chr2R_22780001 Sg4 994 chr2R 22843022 22843046 chr2R 22845009 22845033 flea 4 1987 3.5 4.0 3.8 0.8 2011 chr2R 22843022 intergenic CG9826 + chr2R 22844028 intergenic not near genes chr2R 22845033 intergenic not near genes chr2R_4_22840001 chr2R_22840001 Sg4 995 chr2R 22905009 22905048 chr2R 22905169 22905208 9 160 7.5 0.0 3.8 1.9 199 chr2R 22905009 intron nahoda + chr2R 22905108 intron nahoda + chr2R 22905208 intron nahoda + chr2R_9_22905001 chr2R_22905001 Sg4 996 chr2R 22940093 22940142 chr2R 22940334 22940383 15 241 5.0 5.5 5.2 2.4 290 chr2R 22940093 intron CG3831 - chr2R 22940238 intron CG3831 - chr2R 22940383 exon CG3831 - chr2R_15_22940001 chr2R_22940001 Sg4 997 chr2R 22957027 22957058 chr2R 22957131 22957162 9 103 4.0 6.0 5.0 1.5 135 chr2R 22957027 intergenic CR44780 - chr2R 22957094 intergenic CR44780 - chr2R 22957162 intergenic CR44780 - chr2R_9_22955001 chr2R_22955001 Sg4 998 chr2R 22988295 22988317 chr2R 22988393 22988423 8 104 4.5 4.0 4.2 1.5 128 chr2R 22988295 intron twi + chr2R 22988359 intron twi + chr2R 22988423 intron twi + chr2R_8_22985001 chr2R_22985001 Sg4 999 chr2R 23052633 23052681 chr2R 23052734 23052782 20 101 2.0 4.5 3.2 4.8 149 chr2R 23052633 intergenic not near genes chr2R 23052708 intergenic not near genes chr2R 23052782 intergenic not near genes chr2R_20_23050001 chr2R_23050001 Sg4 1000 chr2R 23053991 23054028 chr2R 23054084 23054131 14 100 3.5 0.0 1.8 5.0 140 chr2R 23053991 intergenic not near genes chr2R 23054061 intergenic not near genes chr2R 23054131 intergenic not near genes chr2R_14_23050001 chr2R_23050001 Sg4 1001 chr2R 23061730 23061758 chr2R 23061872 23061900 7 142 3.0 10.0 6.5 0.9 170 chr2R 23061730 3` UTR l(2)06496 - chr2R 23061815 3` UTR l(2)06496 - chr2R 23061900 3` UTR l(2)06496 - chr2R_7_23060001 chr2R_23060001 Sg4 1002 chr2R 23158325 23158355 chr2R 23158427 23158442 7 97 6.0 5.5 5.8 1.0 117 chr2R 23158325 intron CG9899 + chr2R 23158384 intron CG9899 + chr2R 23158442 intron CG9899 + chr2R_7_23155001 chr2R_23155001 Sg4 1003 chr2R 23175012 23175067 chr2R 23175114 23175169 18 96 5.0 3.5 4.2 3.5 157 chr2R 23175012 intron CG34371 - chr2R 23175090 intron CG34371 - chr2R 23175169 intron CG34371 - chr2R_18_23175001 chr2R_23175001 Sg4 1004 chr2R 23188570 23188578 chr2R 23188673 23188681 4 103 3.5 5.5 4.5 0.7 111 chr2R 23188570 intron CG34371 - chr2R 23188626 intron CG34371 - chr2R 23188681 intron CG34371 - chr2R_4_23185001 chr2R_23185001 Sg4 1005 chr2R 23207830 23207852 chr2R 23207934 23207956 5 104 9.0 1.5 5.2 0.8 126 chr2R 23207830 intergenic not near genes chr2R 23207893 intergenic not near genes chr2R 23207956 intergenic not near genes chr2R_5_23205001 chr2R_23205001 Sg4 1006 chr2R 23228273 23228322 chr2R 23228398 23228421 16 124 6.5 3.0 4.8 2.8 148 chr2R 23228273 intergenic not near genes chr2R 23228347 intergenic not near genes chr2R 23228421 intergenic not near genes chr2R_16_23225001 chr2R_23225001 Sg4 1007 chr2R 23254681 23254731 chr2R 23255113 23255152 16 429 4.0 5.0 4.5 2.9 471 chr2R 23254681 intergenic not near genes chr2R 23254916 intergenic not near genes chr2R 23255152 intergenic not near genes chr2R_16_23250001 chr2R_23250001 Sg4 1008 chr2R 23295393 23295442 chr2R 23295525 23295574 13 131 1.5 3.0 2.2 4.1 181 chr2R 23295393 intergenic not near genes chr2R 23295484 intergenic not near genes chr2R 23295574 intergenic not near genes chr2R_13_23295001 chr2R_23295001 Sg4 1009 chr2R 23303823 23303876 chr2R 23304079 23304107 18 231 1.0 4.5 2.8 4.7 284 chr2R 23303823 intergenic not near genes chr2R 23303965 intergenic not near genes chr2R 23304107 intergenic not near genes chr2R_18_23300001 chr2R_23300001 Sg4 1010 chr2R 23331807 23331861 chr2R 23331932 23331986 11 124 2.5 1.5 2.0 3.7 179 chr2R 23331807 intergenic not near genes chr2R 23331896 intergenic not near genes chr2R 23331986 intergenic not near genes chr2R_11_23330001 chr2R_23330001 Sg4 1011 chr2R 23356253 23356306 chr2R 23356367 23356420 20 111 5.5 3.0 4.2 3.8 167 chr2R 23356253 3` UTR Rpi + chr2R 23356336 3` UTR Rpi + chr2R 23356420 3` UTR,3` UTR Rpi +,CG3500 - chr2R_20_23355001 chr2R_23355001 Sg4 1012 chr2R 23422626 23422665 chr2R 23422731 23422764 18 105 8.5 5.5 7.0 2.2 138 chr2R 23422626 intron CG9815 - chr2R 23422695 intron CG9815 - chr2R 23422764 intron CG9815 - chr2R_18_23420001 chr2R_23420001 Sg4 1013 chr2R 23436706 23436759 chr2R 23436815 23436868 18 108 4.5 7.5 6.0 2.6 162 chr2R 23436706 intergenic not near genes chr2R 23436787 intergenic not near genes chr2R 23436868 intergenic not near genes chr2R_18_23435001 chr2R_23435001 Sg4 1014 chr2R 23437206 23437240 chr2R 23437308 23437335 5 100 6.5 2.0 4.2 1.0 129 chr2R 23437206 intergenic not near genes chr2R 23437270 intergenic not near genes chr2R 23437335 intergenic not near genes chr2R_5_23435001 chr2R_23435001 Sg4 1015 chr2R 23448933 23448988 chr2R 23449044 23449098 24 111 8.0 7.5 7.8 2.7 165 chr2R 23448933 intron CG43795 + chr2R 23449016 intron CG43795 + chr2R 23449098 intron CG43795 + chr2R_24_23445001 chr2R_23445001 Sg4 1016 chr2R 23508902 23508938 chr2R 23509044 23509080 12 142 6.5 3.5 5.0 2.0 178 chr2R 23508902 intergenic not near genes chr2R 23508991 intergenic not near genes chr2R 23509080 intergenic not near genes chr2R_12_23505001 chr2R_23505001 Sg4 1017 chr2R 23518173 23518210 chr2R 23518276 23518313 12 103 3.0 0.0 1.5 4.8 140 chr2R 23518173 intergenic not near genes chr2R 23518243 intergenic not near genes chr2R 23518313 intergenic not near genes chr2R_12_23515001 chr2R_23515001 Sg4 1018 chr2R 23529550 23529606 chr2R 23537148 23537187 412 21 7596 6.5 12.0 9.2 2.1 7637 chr2R 23529550 intron bw - chr2R 23533368 intron bw - chr2R 23537187 exon bw - chr2R_21_23530001 chr2R_23530001 Sg4 1019 chr2R 23571063 23571092 chr2R 23571351 23571401 13 304 2.0 1.5 1.8 4.6 338 chr2R 23571063 intron apt + chr2R 23571232 intron apt + chr2R 23571401 intron apt + chr2R_13_23570001 chr2R_23570001 Sg4 1020 chr2R 23619147 23619195 chr2R 23619300 23619348 6 153 5.0 3.5 4.2 1.2 201 chr2R 23619147 intergenic not near genes chr2R 23619248 intergenic not near genes chr2R 23619348 intergenic not near genes chr2R_6_23615001 chr2R_23615001 Sg4 1021 chr2R 23758305 23758327 chr2R 23758406 23758428 13 101 13.0 7.0 10.0 1.2 123 chr2R 23758305 intron CG9850 - chr2R 23758366 intron CG9850 - chr2R 23758428 intron CG9850 - chr2R_13_23755001 chr2R_23755001 Sg4 1022 chr2R 23758330 23758358 chr2R 23758401 23758459 13 99 6.0 5.5 5.8 1.9 129 chr2R 23758330 intron CG9850 - chr2R 23758394 intron CG9850 - chr2R 23758459 intron CG9850 - chr2R_13_23755001 chr2R_23755001 Sg4 1023 chr2R 23819117 23819136 chr2R 23819237 23819256 7 120 8.0 2.5 5.2 1.1 139 chr2R 23819117 intergenic not near genes chr2R 23819186 intergenic not near genes chr2R 23819256 intergenic not near genes chr2R_7_23815001 chr2R_23815001 Sg4 1024 chr2R 23819887 23819945 chr2R 23820003 23820060 11 115 4.5 6.5 5.5 1.7 173 chr2R 23819887 intergenic CG5549 + chr2R 23819974 intergenic CG5549 + chr2R 23820060 intergenic CG5549 + chr2R_11_23815001 chr2R_23815001 Sg4 1025 chr2R 23832859 23832909 chr2R 23832983 23833012 22 120 3.5 8.0 5.8 3.2 153 chr2R 23832859 intron CG5549 + chr2R 23832936 intron CG5549 + chr2R 23833012 intron CG5549 + chr2R_22_23830001 chr2R_23830001 Sg4 1026 chr2R 23914279 23914326 chr2R 23921928 23921975 412 18 7648 7.5 5.0 6.2 2.5 7696 chr2R 23914279 exon kcc + chr2R 23918127 intron kcc + chr2R 23921975 exon kcc + chr2R_18_23915001 chr2R_23915001 Sg4 1027 chr2R 23926807 23926850 chr2R 23926914 23926957 16 107 3.5 2.5 3.0 4.0 150 chr2R 23926807 3` UTR,3` UTR Ca-P60A -,CG2812 + chr2R 23926882 3` UTR,3` UTR Ca-P60A -,CG2812 + chr2R 23926957 3` UTR Ca-P60A - chr2R_16_23925001 chr2R_23925001 Sg4 1028 chr2R 23986491 23986539 chr2R 23986596 23986644 13 105 2.5 3.5 3.0 3.2 153 chr2R 23986491 intron Phm - chr2R 23986568 intron Phm - chr2R 23986644 intron,5` UTR Phm -,CG30178 + chr2R_13_23985001 chr2R_23985001 Sg4 1029 chr2R 24025693 24025739 chr2R 24025820 24025850 8 125 4.5 1.0 2.8 2.1 157 chr2R 24025693 3` UTR,3` UTR CR45350 -,Adk2 + chr2R 24025772 3` UTR,3` UTR CR45350 -,Adk2 + chr2R 24025850 3` UTR Adk2 + chr2R_8_24025001 chr2R_24025001 Sg4 1030 chr2R 24031355 24031413 chr2R 24031464 24031522 11 108 2.0 3.5 2.8 2.9 167 chr2R 24031355 5` UTR CG30172 - chr2R 24031438 intergenic CG30172 -,Chi - chr2R 24031522 intergenic Chi -,CG30172 - chr2R_11_24030001 chr2R_24030001 Sg4 1031 chr2R 24147044 24147066 chr2R 24154647 24154659 412 5 7601 10.0 7.5 8.8 0.5 7615 chr2R 24147044 intron Dat + chr2R 24150852 intron Dat + chr2R 24154659 intron Dat + chr2R_5_24150001 chr2R_24150001 Sg4 1032 chr2R 24147069 24147074 chr2R 24154646 24154672 412 4 7595 7.5 7.5 7.5 0.5 7603 chr2R 24147069 intron Dat + chr2R 24150870 intron Dat + chr2R 24154672 intron Dat + chr2R_4_24150001 chr2R_24150001 Sg4 1033 chr2R 24166646 24166692 chr2R 24166753 24166799 7 106 3.0 2.0 2.5 2.0 153 chr2R 24166646 intron CG3328 + chr2R 24166722 intron CG3328 + chr2R 24166799 intron CG3328 + chr2R_7_24165001 chr2R_24165001 Sg4 1034 chr2R 24177210 24177265 chr2R 24184720 24184775 412 12 7510 1.5 0.0 0.8 6.7 7565 chr2R 24177210 3` UTR Nop60B + chr2R 24180992 intron Nop60B + chr2R 24184775 3` UTR Nop60B + chr2R_12_24180001 chr2R_24180001 Sg4 1035 chr2R 24228369 24228426 chr2R 24228475 24228529 17 94 1.0 6.0 3.5 3.8 160 chr2R 24228369 intron CG30419 - chr2R 24228449 intron CG30419 - chr2R 24228529 intron CG30419 - chr2R_17_24225001 chr2R_24225001 Sg4 1036 chr2R 24278298 24278354 chr2R 24278405 24278457 18 108 6.0 5.0 5.5 2.8 159 chr2R 24278298 intron nvy + chr2R 24278378 intron nvy + chr2R 24278457 intron nvy + chr2R_18_24275001 chr2R_24275001 Sg4 1037 chr2R 24292493 24292525 chr2R 24292603 24292635 15 110 5.5 7.5 6.5 2.0 142 chr2R 24292493 intergenic not near genes chr2R 24292564 intergenic not near genes chr2R 24292635 intergenic not near genes chr2R_15_24290001 chr2R_24290001 Sg4 1038 chr2R 24320167 24320205 chr2R 24320263 24320298 16 98 4.0 6.0 5.0 2.7 131 chr2R 24320167 intergenic not near genes chr2R 24320232 intergenic not near genes chr2R 24320298 intergenic not near genes chr2R_16_24320001 chr2R_24320001 Sg4 1039 chr2R 24353405 24353436 chr2R 24361791 24361823 roo 7 8387 0.0 2.0 1.0 3.5 8418 chr2R 24353405 intron,intron bs +,CR44811 - chr2R 24357614 intron,intron bs +,CR44811 - chr2R 24361823 intron,intron bs +,CR44811 - chr2R_7_24355001 chr2R_24355001 Sg4 1040 chr2R 24647567 24647618 chr2R 24655149 24655200 412 9 7581 3.0 4.5 3.8 1.9 7633 chr2R 24647567 intergenic not near genes chr2R 24651384 intergenic not near genes chr2R 24655200 intergenic not near genes chr2R_9_24650001 chr2R_24650001 Sg4 1041 chr2R 24727865 24727915 chr2R 24735398 24735448 mdg1 14 7528 6.0 7.0 6.5 1.9 7583 chr2R 24727865 intron Mid1 - chr2R 24731656 intron Mid1 - chr2R 24735448 intron Mid1 - chr2R_14_24730001 chr2R_24730001 Sg4 1042 chr2R 24763587 24763642 chr2R 24765588 24765638 G2 25 1999 5.0 6.0 5.5 3.8 2051 chr2R 24763587 exon CG3894 + chr2R 24764612 intron CG3894 + chr2R 24765638 exon CG3894 + chr2R_25_24760001 chr2R_24760001 Sg4 1043 chr2R 24813393 24813445 chr2R 24813516 24813568 7 123 3.0 1.0 2.0 2.3 175 chr2R 24813393 intergenic not near genes chr2R 24813480 intergenic not near genes chr2R 24813568 intergenic not near genes chr2R_7_24810001 chr2R_24810001 Sg4 1044 chr2R 24859818 24859856 chr2R 24859929 24859967 11 110 6.0 2.0 4.0 2.2 149 chr2R 24859818 5` UTR CR44829 + chr2R 24859892 5` UTR CR44829 + chr2R 24859967 5` UTR CR44829 + chr2R_11_24855001 chr2R_24855001 Sg4 1045 chr2R 24884036 24884078 chr2R 24884143 24884185 19 107 1.5 5.5 3.5 4.2 149 chr2R 24884036 intron NKAIN + chr2R 24884110 intron NKAIN + chr2R 24884185 intron NKAIN + chr2R_19_24880001 chr2R_24880001 Sg4 1046 chr2R 24893087 24893100 chr2R 24893195 24893200 4 106 11.5 8.5 10.0 0.4 113 chr2R 24893087 intron NaCP60E + chr2R 24893144 intron NaCP60E + chr2R 24893200 intron NaCP60E + chr2R_4_24890001 chr2R_24890001 Sg4 1047 chr2R 24893102 24893132 chr2R 24893189 24893242 10 104 4.0 7.5 5.8 1.5 140 chr2R 24893102 intron NaCP60E + chr2R 24893172 intron NaCP60E + chr2R 24893242 intron NaCP60E + chr2R_10_24890001 chr2R_24890001 Sg4 1048 chr2R 24919065 24919115 chr2R 24919339 24919394 18 278 5.5 2.5 4.0 3.6 329 chr2R 24919065 3` UTR NaCP60E + chr2R 24919230 3` UTR NaCP60E + chr2R 24919394 3` UTR NaCP60E + chr2R_18_24915001 chr2R_24915001 Sg4 1049 chr2R 25004873 25004915 chr2R 25004976 25005018 11 100 5.0 5.0 5.0 1.8 145 chr2R 25004873 intron zip - chr2R 25004946 intron zip - chr2R 25005018 intron zip - chr2R_11_25000001 chr2R_25000001 Sg4 1050 chr2R 25014520 25014571 chr2R 25014621 25014672 17 99 3.0 3.5 3.2 4.0 152 chr2R 25014520 intron uzip + chr2R 25014596 intron uzip + chr2R 25014672 intron uzip + chr2R_17_25010001 chr2R_25010001 Sg4 1051 chr2R 25018314 25018374 chr2R 25018440 25018476 22 124 4.5 7.0 5.8 3.2 162 chr2R 25018314 intron uzip + chr2R 25018395 intron uzip + chr2R 25018476 intron uzip + chr2R_22_25015001 chr2R_25015001 Sg4 1052 chr2R 25022621 25022664 chr2R 25022730 25022773 9 109 5.0 6.0 5.5 1.4 152 chr2R 25022621 intron uzip + chr2R 25022697 intron uzip + chr2R 25022773 intron uzip + chr2R_9_25020001 chr2R_25020001 Sg4 1053 chr2R 25081583 25081639 chr2R 25082704 25082760 20 1119 5.5 3.0 4.2 3.8 1177 chr2R 25081583 intron gol - chr2R 25082172 intron gol - chr2R 25082760 intron gol - chr2R_20_25080001 chr2R_25080001 Sg4 1054 chr2R 25101255 25101304 chr2R 25101377 25101431 14 125 4.5 4.5 4.5 2.5 176 chr2R 25101255 intron lov - chr2R 25101343 intron lov - chr2R 25101431 intron lov - chr2R_14_25100001 chr2R_25100001 Sg4 1055 chr2R 25141635 25141682 chr2R 25159345 25159397 roo 13 17715 4.5 1.5 3.0 3.2 17762 chr2R 25141635 intergenic not near genes chr2R 25150516 intergenic not near genes chr2R 25159397 intergenic not near genes chr2R_13_25150001 chr2R_25150001 Sg4 1056 chr2R 25234742 25234797 chr2R 25234847 25234902 16 105 1.5 2.0 1.8 5.7 160 chr2R 25234742 intron CG9380 - chr2R 25234822 intron CG9380 - chr2R 25234902 intron CG9380 - chr2R_16_25230001 chr2R_25230001 Sg4 1057 chr3L 110195 110241 chr3L 119387 119433 roo 5 9192 3.0 4.0 3.5 1.1 9238 chr3L 110195 intergenic not near genes chr3L 114814 intergenic not near genes chr3L 119433 intergenic not near genes chr3L_5_110001 chr3L_110001 Sg4 1058 chr3L 161684 161718 chr3L 162534 162569 7 851 0.5 6.5 3.5 1.6 885 chr3L 161684 intron p130CAS + chr3L 162126 intron p130CAS + chr3L 162569 intron p130CAS + chr3L_7_160001 chr3L_160001 Sg4 1059 chr3L 274218 274272 chr3L 274328 274382 28 109 11.0 12.5 11.8 2.2 164 chr3L 274218 exon miple2 + chr3L 274300 intron miple2 + chr3L 274382 intron miple2 + chr3L_28_270001 chr3L_270001 Sg4 1060 chr3L 232296 232328 chr3L 276384 276416 14 44088 29.0 30.0 29.5 0.5 44120 chr3L 232296 exon CG34454 - chr3L 254356 exon DIP2 - chr3L 276416 exon ttm2 + chr3L_14_250001 chr3L_250001 Sg4 1061 chr3L 339440 339469 chr3L 339542 339577 7 107 1.5 4.0 2.8 1.8 137 chr3L 339440 intron,intron Ptpmeg +,mthl10 - chr3L 339508 intron,intron Ptpmeg +,mthl10 - chr3L 339577 intron,intron Ptpmeg +,mthl10 - chr3L_7_335001 chr3L_335001 Sg4 1062 chr3L 343168 343177 chr3L 343316 343325 4 148 6.0 5.5 5.8 0.6 157 chr3L 343168 intron Ptpmeg + chr3L 343246 intron Ptpmeg + chr3L 343325 intron Ptpmeg + chr3L_4_340001 chr3L_340001 Sg4 1063 chr3L 349356 349410 chr3L 349469 349523 22 113 2.5 3.0 2.8 5.8 167 chr3L 349356 intron Ptpmeg + chr3L 349440 intron Ptpmeg + chr3L 349523 intron Ptpmeg + chr3L_22_345001 chr3L_345001 Sg4 1064 chr3L 402664 402716 chr3L 409742 409794 297 16 7077 5.0 4.5 4.8 2.8 7130 chr3L 402664 intergenic not near genes chr3L 406229 intergenic not near genes chr3L 409794 intergenic not near genes chr3L_16_405001 chr3L_405001 Sg4 1065 chr3L 477868 477890 chr3L 477974 477998 7 108 3.5 0.0 1.8 2.5 130 chr3L 477868 intron klar - chr3L 477933 intron klar - chr3L 477998 intron klar - chr3L_7_475001 chr3L_475001 Sg4 1066 chr3L 535023 535078 chr3L 535130 535185 15 106 2.5 1.0 1.8 5.4 162 chr3L 535023 intron klar - chr3L 535104 intron klar - chr3L 535185 intron klar - chr3L_15_535001 chr3L_535001 Sg4 1067 chr3L 592952 592967 chr3L 593053 593068 4 101 3.0 5.0 4.0 0.8 116 chr3L 592952 intergenic MED14 + chr3L 593010 intergenic MED14 + chr3L 593068 intergenic MED14 + chr3L_4_590001 chr3L_590001 Sg4 1068 chr3L 642882 642939 chr3L 643079 643153 14 210 10.0 0.0 5.0 2.3 271 chr3L 642882 5` UTR CR43334 + chr3L 643018 5` UTR CR43334 + chr3L 643153 5` UTR CR43334 + chr3L_14_640001 chr3L_640001 Sg4 1069 chr3L 670395 670453 chr3L 670559 670591 31 163 7.0 5.5 6.2 4.3 196 chr3L 670395 intergenic not near genes chr3L 670493 intergenic not near genes chr3L 670591 intergenic not near genes chr3L_31_670001 chr3L_670001 Sg4 1070 chr3L 705885 705919 chr3L 706006 706040 10 121 4.5 3.0 3.8 2.1 155 chr3L 705885 intergenic CG13895 -,CR44514 + chr3L 705962 3` UTR CG13895 - chr3L 706040 3` UTR CG13895 - chr3L_10_705001 chr3L_705001 Sg4 1071 chr3L 732796 732846 chr3L 733043 733093 15 243 2.0 3.0 2.5 4.3 297 chr3L 732796 intergenic not near genes chr3L 732944 intergenic not near genes chr3L 733093 intergenic not near genes chr3L_15_730001 chr3L_730001 Sg4 1072 chr3L 750907 750947 chr3L 751336 751376 10 428 4.0 5.0 4.5 1.8 469 chr3L 750907 intron,intron hng3 -,emc + chr3L 751142 intron,intron hng3 -,emc + chr3L 751376 intron,intron hng3 -,emc + chr3L_10_750001 chr3L_750001 Sg4 1073 chr3L 789892 789946 chr3L 790402 790457 roo 5 511 2.5 0.5 1.5 2.0 565 chr3L 789892 intergenic not near genes chr3L 790174 intergenic not near genes chr3L 790457 intergenic not near genes chr3L_5_790001 chr3L_790001 Sg4 1074 chr3L 822061 822095 chr3L 822166 822198 14 105 0.5 4.5 2.5 4.0 137 chr3L 822061 intergenic not near genes chr3L 822130 intergenic not near genes chr3L 822198 intergenic not near genes chr3L_14_820001 chr3L_820001 Sg4 1075 chr3L 843702 843752 chr3L 843808 843841 5 103 2.5 0.0 1.2 2.3 139 chr3L 843702 intergenic Gr61a +,CG13889 + chr3L 843772 intergenic Gr61a +,CG13889 + chr3L 843841 intergenic CG13889 +,Gr61a + chr3L_5_840001 chr3L_840001 Sg4 1076 chr3L 857975 857991 chr3L 866481 866491 Tirant 4 8504 8.0 2.5 5.2 0.6 8516 chr3L 857975 intergenic not near genes chr3L 862233 intergenic not near genes chr3L 866491 intergenic CG12502 + chr3L_4_860001 chr3L_860001 Sg4 1077 chr3L 857992 858024 chr3L 866478 866519 Tirant 10 8497 5.5 2.5 4.0 2.0 8527 chr3L 857992 intergenic not near genes chr3L 862256 intergenic not near genes chr3L 866519 5` UTR CG12502 + chr3L_10_860001 chr3L_860001 Sg4 1078 chr3L 899996 900018 chr3L 900105 900127 7 109 0.0 4.5 2.2 2.2 131 chr3L 899996 intergenic not near genes chr3L 900062 intergenic not near genes chr3L 900127 intergenic not near genes chr3L_7_900001 chr3L_900001 Sg4 1079 chr3L 905073 905094 chr3L 905182 905203 6 109 0.0 5.5 2.8 1.6 130 chr3L 905073 intergenic not near genes chr3L 905138 intergenic not near genes chr3L 905203 intergenic not near genes chr3L_6_905001 chr3L_905001 Sg4 1080 chr3L 933884 933942 chr3L 934013 934070 12 127 2.5 5.5 4.0 2.4 186 chr3L 933884 intron Glut1 + chr3L 933977 intron Glut1 + chr3L 934070 intron Glut1 + chr3L_12_930001 chr3L_930001 Sg4 1081 chr3L 939753 939795 chr3L 940899 940941 jockey 15 1145 9.0 4.5 6.8 1.9 1188 chr3L 939753 intron Glut1 + chr3L 940347 intron Glut1 + chr3L 940941 intron Glut1 + chr3L_15_940001 chr3L_940001 Sg4 1082 chr3L 958291 958348 chr3L 958400 958457 16 108 2.0 3.5 2.8 4.2 166 chr3L 958291 intron Glut1 + chr3L 958374 intron Glut1 + chr3L 958457 intron Glut1 + chr3L_16_955001 chr3L_955001 Sg4 1083 chr3L 960994 961030 chr3L 961112 961148 10 117 2.0 2.5 2.2 3.1 154 chr3L 960994 intron Glut1 + chr3L 961071 intron Glut1 + chr3L 961148 intron Glut1 + chr3L_10_960001 chr3L_960001 Sg4 1084 chr3L 1015002 1015041 chr3L 1015139 1015162 9 135 3.5 7.0 5.2 1.5 160 chr3L 1015002 intron trio - chr3L 1015082 intron trio - chr3L 1015162 intron trio - chr3L_9_1015001 chr3L_1015001 Sg4 1085 chr3L 1021350 1021404 chr3L 1021454 1021509 21 104 4.5 4.0 4.2 4.0 159 chr3L 1021350 intron trio - chr3L 1021430 intron trio - chr3L 1021509 intron trio - chr3L_21_1020001 chr3L_1020001 Sg4 1086 chr3L 1031554 1031608 chr3L 1031655 1031697 20 98 4.5 3.5 4.0 4.0 143 chr3L 1031554 intron trio - chr3L 1031626 intron trio - chr3L 1031697 intron trio - chr3L_20_1030001 chr3L_1030001 Sg4 1087 chr3L 1040534 1040578 chr3L 1040633 1040687 8 107 4.0 5.5 4.8 1.4 153 chr3L 1040534 intron bab1 - chr3L 1040610 intron bab1 - chr3L 1040687 intron bab1 - chr3L_8_1040001 chr3L_1040001 Sg4 1088 chr3L 1047339 1047385 chr3L 1055176 1055212 412 9 7829 3.5 3.0 3.2 2.1 7873 chr3L 1047339 intron bab1 - chr3L 1051276 intron bab1 - chr3L 1055212 intron bab1 - chr3L_9_1050001 chr3L_1050001 Sg4 1089 chr3L 1154117 1154157 chr3L 1163292 1163332 roo 9 9175 2.5 2.5 2.5 2.6 9215 chr3L 1154117 intron bab2 - chr3L 1158724 intron bab2 - chr3L 1163332 intron bab2 - chr3L_9_1155001 chr3L_1155001 Sg4 1090 chr3L 1167000 1167007 chr3L 1167102 1167109 5 102 3.5 3.0 3.2 1.2 109 chr3L 1167000 intron bab2 - chr3L 1167054 intron bab2 - chr3L 1167109 intron bab2 - chr3L_5_1165001 chr3L_1165001 Sg4 1091 chr3L 1175715 1175748 chr3L 1175872 1175905 10 156 3.0 5.5 4.2 1.9 190 chr3L 1175715 intron bab2 - chr3L 1175810 intron bab2 - chr3L 1175905 intron bab2 - chr3L_10_1175001 chr3L_1175001 Sg4 1092 chr3L 1219577 1219618 chr3L 1227335 1227376 412 14 7750 3.5 7.0 5.2 2.3 7799 chr3L 1219577 intron mwh + chr3L 1223476 intron mwh + chr3L 1227376 intron mwh + chr3L_14_1220001 chr3L_1220001 Sg4 1093 chr3L 1236215 1236237 chr3L 1236317 1236339 7 102 5.0 0.0 2.5 2.0 124 chr3L 1236215 intron CG9194 + chr3L 1236277 intron CG9194 + chr3L 1236339 intron CG9194 + chr3L_7_1235001 chr3L_1235001 Sg4 1094 chr3L 1260127 1260156 chr3L 1260232 1260261 5 104 5.0 3.5 4.2 1.0 134 chr3L 1260127 intron CG9134 + chr3L 1260194 intron CG9134 + chr3L 1260261 intron CG9134 + chr3L_5_1260001 chr3L_1260001 Sg4 1095 chr3L 1276332 1276372 chr3L 1276452 1276489 12 111 3.0 1.0 2.0 4.0 157 chr3L 1276332 intron CG32333 + chr3L 1276410 intron CG32333 + chr3L 1276489 intron CG32333 + chr3L_12_1275001 chr3L_1275001 Sg4 1096 chr3L 1347135 1347193 chr3L 1347245 1347292 22 107 6.0 5.0 5.5 3.4 157 chr3L 1347135 intron Ptp61F - chr3L 1347214 intron Ptp61F - chr3L 1347292 intron Ptp61F - chr3L_22_1345001 chr3L_1345001 Sg4 1097 chr3L 1364017 1364064 chr3L 1364120 1364175 6 110 0.0 4.0 2.0 2.0 158 chr3L 1364017 intron Ptp61F - chr3L 1364096 intron Ptp61F - chr3L 1364175 intron Ptp61F - chr3L_6_1360001 chr3L_1360001 Sg4 1098 chr3L 1385149 1385200 chr3L 1385262 1385313 15 113 4.5 4.5 4.5 2.7 164 chr3L 1385149 intron,intron Ptp61F -,ru + chr3L 1385231 intron,intron Ptp61F -,ru + chr3L 1385313 intron,intron Ptp61F -,ru + chr3L_15_1385001 chr3L_1385001 Sg4 1099 chr3L 1396713 1396752 chr3L 1396822 1396837 11 102 13.0 13.0 13.0 0.8 124 chr3L 1396713 intron Ptp61F - chr3L 1396775 intron Ptp61F - chr3L 1396837 intron Ptp61F - chr3L_11_1395001 chr3L_1395001 Sg4 1100 chr3L 1485724 1485739 chr3L 1486918 1486929 1360 4 1192 7.5 14.5 11.0 0.3 1205 chr3L 1485724 intron stet - chr3L 1486326 intron stet - chr3L 1486929 intron stet - chr3L_4_1485001 chr3L_1485001 Sg4 1101 chr3L 1505979 1506032 chr3L 1513601 1513654 17.6 21 7621 4.0 2.5 3.2 5.0 7675 chr3L 1505979 intron,intron Psa +,cue - chr3L 1509816 intron,intron Psa +,cue - chr3L 1513654 intron,intron Psa +,cue - chr3L_21_1505001 chr3L_1505001 Sg4 1102 chr3L 1569500 1569530 chr3L 1569601 1569631 13 100 4.0 5.0 4.5 2.4 131 chr3L 1569500 5` UTR CG12004 + chr3L 1569566 intron CG12004 + chr3L 1569631 intron CG12004 + chr3L_13_1565001 chr3L_1565001 Sg4 1103 chr3L 1684012 1684033 chr3L 1684099 1684100 9 95 3.0 3.0 3.0 2.2 88 chr3L 1684012 intron CG7991 + chr3L 1684056 intron CG7991 + chr3L 1684100 intron CG7991 + chr3L_9_1680001 chr3L_1680001 Sg4 1104 chr3L 1740836 1740879 chr3L 1741104 1741146 pogo 13 268 4.0 5.5 4.8 2.2 310 chr3L 1740836 intron Gk + chr3L 1740991 intron Gk + chr3L 1741146 intron Gk + chr3L_13_1740001 chr3L_1740001 Sg4 1105 chr3L 1848620 1848668 chr3L 1848723 1848771 18 103 0.5 5.5 3.0 4.5 151 chr3L 1848620 intergenic not near genes chr3L 1848696 intergenic not near genes chr3L 1848771 intergenic not near genes chr3L_18_1845001 chr3L_1845001 Sg4 1106 chr3L 1984692 1984723 chr3L 1984796 1984827 9 104 2.5 3.0 2.8 2.4 135 chr3L 1984692 intergenic not near genes chr3L 1984760 intergenic not near genes chr3L 1984827 intergenic not near genes chr3L_9_1980001 chr3L_1980001 Sg4 1107 chr3L 1994564 1994614 chr3L 1994670 1994720 9 106 6.5 2.5 4.5 1.6 156 chr3L 1994564 intergenic not near genes chr3L 1994642 intergenic not near genes chr3L 1994720 intergenic not near genes chr3L_9_1990001 chr3L_1990001 Sg4 1108 chr3L 2168754 2168799 chr3L 2168870 2168915 6 116 6.0 4.0 5.0 1.0 161 chr3L 2168754 exon CG15879 - chr3L 2168834 intron CG15879 - chr3L 2168915 intron CG15879 - chr3L_6_2165001 chr3L_2165001 Sg4 1109 chr3L 2199794 2199815 chr3L 2199895 2199916 12 101 4.0 7.0 5.5 1.8 122 chr3L 2199794 intergenic not near genes chr3L 2199855 intergenic not near genes chr3L 2199916 intergenic not near genes chr3L_12_2195001 chr3L_2195001 Sg4 1110 chr3L 2307979 2308026 chr3L 2308110 2308157 16 131 1.5 3.5 2.5 4.6 178 chr3L 2307979 intergenic not near genes chr3L 2308068 intergenic not near genes chr3L 2308157 intergenic not near genes chr3L_16_2305001 chr3L_2305001 Sg4 1111 chr3L 2447495 2447532 chr3L 2456662 2456702 roo 10 9177 2.5 2.0 2.2 3.1 9207 chr3L 2447495 intron CG45186 + chr3L 2452098 intron CG45186 + chr3L 2456702 intron CG45186 + chr3L_10_2450001 chr3L_2450001 Sg4 1112 chr3L 2683923 2683969 chr3L 2684024 2684070 13 101 7.5 5.0 6.2 1.8 147 chr3L 2683923 intron Fife - chr3L 2683996 intron Fife - chr3L 2684070 intron Fife - chr3L_13_2680001 chr3L_2680001 Sg4 1113 chr3L 2692137 2692186 chr3L 2692240 2692289 15 103 3.5 4.0 3.8 3.1 152 chr3L 2692137 intron Fife - chr3L 2692213 intron Fife - chr3L 2692289 intron Fife - chr3L_15_2690001 chr3L_2690001 Sg4 1114 chr3L 2719511 2719555 chr3L 2719638 2719682 10 125 2.5 1.5 2.0 3.3 171 chr3L 2719511 3` UTR Mrtf - chr3L 2719596 3` UTR Mrtf - chr3L 2719682 3` UTR Mrtf - chr3L_10_2715001 chr3L_2715001 Sg4 1115 chr3L 2795704 2795743 chr3L 2795852 2795891 5 148 3.0 1.5 2.2 1.6 187 chr3L 2795704 intron CG43444 - chr3L 2795798 intron CG43444 - chr3L 2795891 intron CG43444 - chr3L_5_2795001 chr3L_2795001 Sg4 1116 chr3L 2850130 2850180 chr3L 2850252 2850300 9 122 2.5 6.0 4.2 1.7 170 chr3L 2850130 intron CG43444 - chr3L 2850215 intron CG43444 - chr3L 2850300 intron CG43444 - chr3L_9_2850001 chr3L_2850001 Sg4 1117 chr3L 2897394 2897428 chr3L 2897525 2897559 12 131 2.5 2.0 2.2 3.8 165 chr3L 2897394 5` UTR Shab + chr3L 2897476 intron Shab + chr3L 2897559 intron Shab + chr3L_12_2895001 chr3L_2895001 Sg4 1118 chr3L 2906187 2906245 chr3L 2906297 2906355 6 109 3.5 4.0 3.8 1.2 168 chr3L 2906187 intron Shab + chr3L 2906271 intron Shab + chr3L 2906355 intron Shab + chr3L_6_2905001 chr3L_2905001 Sg4 1119 chr3L 2980033 2980081 chr3L 2982792 2982840 21 2762 24.0 50.5 37.2 0.5 2807 chr3L 2980033 intergenic not near genes chr3L 2981436 exon CG2107 + chr3L 2982840 exon CG2107 + chr3L_21_2980001 chr3L_2980001 Sg4 1120 chr3L 3027582 3027624 chr3L 3028608 3028650 13 1024 4.5 2.0 3.2 3.1 1068 chr3L 3027582 intergenic not near genes chr3L 3028116 intergenic not near genes chr3L 3028650 intergenic not near genes chr3L_13_3025001 chr3L_3025001 Sg4 1121 chr3L 3028982 3029016 chr3L 3029093 3029127 4 111 2.5 0.0 1.2 1.8 145 chr3L 3028982 intergenic not near genes chr3L 3029054 intergenic not near genes chr3L 3029127 intergenic not near genes chr3L_4_3025001 chr3L_3025001 Sg4 1122 chr3L 3031556 3031575 chr3L 3031669 3031688 6 113 3.5 0.0 1.8 2.1 132 chr3L 3031556 intergenic not near genes chr3L 3031622 intergenic not near genes chr3L 3031688 intergenic not near genes chr3L_6_3030001 chr3L_3030001 Sg4 1123 chr3L 3051718 3051744 chr3L 3051985 3052011 pogo 11 267 6.5 3.5 5.0 1.8 293 chr3L 3051718 3` UTR CG32485 + chr3L 3051864 intergenic CG32485 + chr3L 3052011 intergenic CG32485 + chr3L_11_3050001 chr3L_3050001 Sg4 1124 chr3L 3061265 3061313 chr3L 3069867 3069921 Tirant 15 8604 3.0 3.0 3.0 3.8 8656 chr3L 3061265 intron CG32486 - chr3L 3065593 intron CG32486 - chr3L 3069921 intron CG32486 - chr3L_15_3065001 chr3L_3065001 Sg4 1125 chr3L 3140811 3140854 chr3L 3141369 3141412 8 558 0.5 5.5 3.0 2.0 601 chr3L 3140811 intron CG11537 - chr3L 3141112 intron CG11537 - chr3L 3141412 intron CG11537 - chr3L_8_3140001 chr3L_3140001 Sg4 1126 chr3L 3284416 3284469 chr3L 3284525 3284578 14 109 3.5 4.0 3.8 2.9 162 chr3L 3284416 intron CG12017 + chr3L 3284497 intron CG12017 + chr3L 3284578 intron CG12017 + chr3L_14_3280001 chr3L_3280001 Sg4 1127 chr3L 3306497 3306549 chr3L 3306610 3306662 17 113 1.5 3.5 2.5 4.9 165 chr3L 3306497 intron ZnT63C + chr3L 3306580 intron ZnT63C + chr3L 3306662 intron ZnT63C + chr3L_17_3305001 chr3L_3305001 Sg4 1128 chr3L 3317507 3317565 chr3L 3317611 3317664 21 103 0.5 2.5 1.5 8.4 157 chr3L 3317507 intergenic Drsl5 + chr3L 3317586 intergenic PIG-C -,Drsl5 + chr3L 3317664 intergenic PIG-C - chr3L_21_3315001 chr3L_3315001 Sg4 1129 chr3L 3436266 3436315 chr3L 3436370 3436419 33 103 6.0 7.0 6.5 4.4 153 chr3L 3436266 intron eIF5B - chr3L 3436342 intron eIF5B - chr3L 3436419 intron eIF5B - chr3L_33_3435001 chr3L_3435001 Sg4 1130 chr3L 3405713 3405752 chr3L 3449413 3449452 11 43700 28.0 21.0 24.5 0.4 43739 chr3L 3405713 intron sty - chr3L 3427582 intergenic not near genes chr3L 3449452 intron eIF5B - chr3L_11_3425001 chr3L_3425001 Sg4 1131 chr3L 3451351 3451382 chr3L 3451476 3451507 8 125 3.0 2.0 2.5 2.3 156 chr3L 3451351 intron eIF5B - chr3L 3451429 intron eIF5B - chr3L 3451507 intron eIF5B - chr3L_8_3450001 chr3L_3450001 Sg4 1132 chr3L 3487044 3487092 chr3L 3487147 3487195 7 102 4.0 1.5 2.8 1.8 151 chr3L 3487044 intron CG42324 + chr3L 3487120 intron CG42324 + chr3L 3487195 intron CG42324 + chr3L_7_3485001 chr3L_3485001 Sg4 1133 chr3L 3494172 3494201 chr3L 3494273 3494303 9 102 0.0 2.5 1.2 4.1 131 chr3L 3494172 intron CG42324 + chr3L 3494238 intron CG42324 + chr3L 3494303 intron CG42324 + chr3L_9_3490001 chr3L_3490001 Sg4 1134 chr3L 3512934 3512977 chr3L 3513039 3513082 9 104 1.5 1.5 1.5 3.6 148 chr3L 3512934 intergenic ImpE2 - chr3L 3513008 intergenic ImpE2 - chr3L 3513082 intergenic ImpE2 - chr3L_9_3510001 chr3L_3510001 Sg4 1135 chr3L 3581728 3581771 chr3L 3581836 3581881 5 110 2.5 0.5 1.5 2.0 153 chr3L 3581728 intron Eip63E + chr3L 3581804 intron Eip63E + chr3L 3581881 intron Eip63E + chr3L_5_3580001 chr3L_3580001 Sg4 1136 chr3L 3601279 3601297 chr3L 3606615 3606633 copia 6 5336 6.5 5.5 6.0 0.9 5354 chr3L 3601279 intron Eip63E + chr3L 3603956 intron Eip63E + chr3L 3606633 intron Eip63E + chr3L_6_3600001 chr3L_3600001 Sg4 1137 chr3L 3601310 3601331 chr3L 3606610 3606667 copia 5 5329 3.5 4.0 3.8 1.0 5357 chr3L 3601310 intron Eip63E + chr3L 3603988 intron Eip63E + chr3L 3606667 intron Eip63E + chr3L_5_3600001 chr3L_3600001 Sg4 1138 chr3L 3619379 3619434 chr3L 3619498 3619553 13 118 4.0 4.0 4.0 2.6 174 chr3L 3619379 intergenic not near genes chr3L 3619466 intergenic not near genes chr3L 3619553 intergenic not near genes chr3L_13_3615001 chr3L_3615001 Sg4 1139 chr3L 3709440 3709446 chr3L 3709547 3709553 4 107 5.0 6.0 5.5 0.6 113 chr3L 3709440 intergenic CR45675 + chr3L 3709496 intergenic CR45675 + chr3L 3709553 intergenic not near genes chr3L_4_3705001 chr3L_3705001 Sg4 1140 chr3L 3766716 3766744 chr3L 3766827 3766855 7 111 4.0 0.0 2.0 2.3 139 chr3L 3766716 intron CG32264 - chr3L 3766786 intron CG32264 - chr3L 3766855 intron CG32264 - chr3L_7_3765001 chr3L_3765001 Sg4 1141 chr3L 3797228 3797257 chr3L 3797336 3797365 6 108 0.5 5.0 2.8 1.6 137 chr3L 3797228 intron CG32264 - chr3L 3797296 intron CG32264 - chr3L 3797365 intron CG32264 - chr3L_6_3795001 chr3L_3795001 Sg4 1142 chr3L 3815032 3815082 chr3L 3815132 3815177 14 104 3.0 4.5 3.8 2.9 145 chr3L 3815032 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815104 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815177 intron,intron Scsalpha +,CR43932 - chr3L_14_3815001 chr3L_3815001 Sg4 1143 chr3L 3833722 3833740 chr3L 3833982 3834006 pogo 6 265 7.0 1.5 4.2 1.2 284 chr3L 3833722 intron enc + chr3L 3833864 intron enc + chr3L 3834006 intron enc + chr3L_6_3830001 chr3L_3830001 Sg4 1144 chr3L 3877440 3877464 chr3L 3877588 3877612 4 147 0.0 2.5 1.2 1.8 172 chr3L 3877440 intergenic not near genes chr3L 3877526 intergenic not near genes chr3L 3877612 intergenic not near genes chr3L_4_3875001 chr3L_3875001 Sg4 1145 chr3L 3935802 3935848 chr3L 3935905 3935951 10 103 0.0 5.0 2.5 2.9 149 chr3L 3935802 5` UTR Eip63F-2 + chr3L 3935876 5` UTR Eip63F-2 + chr3L 3935951 5` UTR Eip63F-2 + chr3L_10_3935001 chr3L_3935001 Sg4 1146 chr3L 4044725 4044775 chr3L 4045046 4045096 13 320 3.0 4.0 3.5 2.9 371 chr3L 4044725 intergenic not near genes chr3L 4044910 intergenic not near genes chr3L 4045096 intergenic not near genes chr3L_13_4040001 chr3L_4040001 Sg4 1147 chr3L 4298543 4298578 chr3L 4298648 4298683 13 104 12.0 4.0 8.0 1.4 140 chr3L 4298543 exon dyl - chr3L 4298613 5` UTR dyl - chr3L 4298683 5` UTR dyl - chr3L_13_4295001 chr3L_4295001 Sg4 1148 chr3L 4328712 4328748 chr3L 4336235 4336271 412 6 7523 3.0 1.0 2.0 2.0 7559 chr3L 4328712 intron Cip4 - chr3L 4332492 intron Cip4 - chr3L 4336271 exon Cip4 - chr3L_6_4330001 chr3L_4330001 Sg4 1149 chr3L 4343485 4343521 chr3L 4343587 4343623 9 102 2.0 0.5 1.2 4.1 138 chr3L 4343485 intron Cip4 - chr3L 4343554 intron Cip4 - chr3L 4343623 intron Cip4 - chr3L_9_4340001 chr3L_4340001 Sg4 1150 chr3L 4364208 4364228 chr3L 4364322 4364342 5 114 2.0 5.0 3.5 1.1 134 chr3L 4364208 intergenic Cip4 -,mRpS6 + chr3L 4364275 intergenic Cip4 -,mRpS6 + chr3L 4364342 intergenic mRpS6 +,Cip4 - chr3L_5_4360001 chr3L_4360001 Sg4 1151 chr3L 4519399 4519439 chr3L 4519501 4519539 6 100 2.0 0.0 1.0 3.0 140 chr3L 4519399 intron Tie - chr3L 4519469 intron Tie - chr3L 4519539 intron Tie - chr3L_6_4515001 chr3L_4515001 Sg4 1152 chr3L 4521051 4521095 chr3L 4521438 4521490 14 377 2.5 3.5 3.0 3.5 439 chr3L 4521051 intron Tie - chr3L 4521270 intron Tie - chr3L 4521490 intron Tie - chr3L_14_4520001 chr3L_4520001 Sg4 1153 chr3L 4536336 4536387 chr3L 4536462 4536513 12 126 4.0 2.0 3.0 3.0 177 chr3L 4536336 exon CG11353 + chr3L 4536424 intron CG11353 + chr3L 4536513 intron CG11353 + chr3L_12_4535001 chr3L_4535001 Sg4 1154 chr3L 4607240 4607291 chr3L 4607356 4607407 12 116 5.0 4.5 4.8 2.1 167 chr3L 4607240 intron Src64B - chr3L 4607324 intron Src64B - chr3L 4607407 intron Src64B - chr3L_12_4605001 chr3L_4605001 Sg4 1155 chr3L 4652554 4652567 chr3L 4652662 4652669 5 107 9.0 3.0 6.0 0.7 115 chr3L 4652554 intron axo - chr3L 4652612 intron axo - chr3L 4652669 intron axo - chr3L_5_4650001 chr3L_4650001 Sg4 1156 chr3L 4652568 4652601 chr3L 4652659 4652710 7 106 4.0 3.0 3.5 1.6 142 chr3L 4652568 intron axo - chr3L 4652639 intron axo - chr3L 4652710 intron axo - chr3L_7_4650001 chr3L_4650001 Sg4 1157 chr3L 4797940 4797990 chr3L 4798044 4798095 19 103 0.0 8.5 4.2 3.7 155 chr3L 4797940 intergenic not near genes chr3L 4798018 intergenic not near genes chr3L 4798095 intergenic not near genes chr3L_19_4795001 chr3L_4795001 Sg4 1158 chr3L 4858289 4858335 chr3L 4858398 4858450 34 113 7.5 11.0 9.2 3.3 161 chr3L 4858289 intergenic not near genes chr3L 4858370 intergenic not near genes chr3L 4858450 intergenic not near genes chr3L_34_4855001 chr3L_4855001 Sg4 1159 chr3L 4901113 4901144 chr3L 4907328 4907359 diver 8 6215 4.5 10.5 7.5 0.9 6246 chr3L 4901113 intergenic CG13704 + chr3L 4904236 intergenic not near genes chr3L 4907359 intergenic not near genes chr3L_8_4900001 chr3L_4900001 Sg4 1160 chr3L 4990722 4990774 chr3L 4990861 4990913 11 138 4.0 3.5 3.8 2.3 191 chr3L 4990722 intron Con - chr3L 4990818 intron Con - chr3L 4990913 intron Con - chr3L_11_4990001 chr3L_4990001 Sg4 1161 chr3L 5034136 5034186 chr3L 5043312 5043363 roo 9 9175 3.5 0.5 2.0 3.0 9227 chr3L 5034136 intron Con - chr3L 5038750 intron Con - chr3L 5043363 intron Con - chr3L_9_5035001 chr3L_5035001 Sg4 1162 chr3L 5045440 5045476 chr3L 5050246 5050282 Doc 6 4806 3.0 2.5 2.8 1.6 4842 chr3L 5045440 intron Con - chr3L 5047861 intron Con - chr3L 5050282 intron Con - chr3L_6_5045001 chr3L_5045001 Sg4 1163 chr3L 5101173 5101224 chr3L 5101277 5101329 8 104 1.5 3.5 2.5 2.3 156 chr3L 5101173 intergenic not near genes chr3L 5101251 intergenic not near genes chr3L 5101329 intergenic not near genes chr3L_8_5100001 chr3L_5100001 Sg4 1164 chr3L 5104462 5104511 chr3L 5124621 5124670 8 20159 0.0 2.0 1.0 4.0 20208 chr3L 5104462 intergenic not near genes chr3L 5114566 intergenic not near genes chr3L 5124670 intergenic not near genes chr3L_8_5110001 chr3L_5110001 Sg4 1165 chr3L 5228409 5228636 chr3L 5228514 5228745 15 102 25.0 9.5 17.2 0.8 336 chr3L 5228409 intron shep - chr3L 5228577 intron shep - chr3L 5228745 intron shep - chr3L_15_5225001 chr3L_5225001 Sg4 1166 chr3L 5251855 5251871 chr3L 5251959 5251975 5 104 0.5 6.5 3.5 1.1 120 chr3L 5251855 intron shep - chr3L 5251915 intron shep - chr3L 5251975 intron shep - chr3L_5_5250001 chr3L_5250001 Sg4 1167 chr3L 5271167 5271201 chr3L 5271270 5271279 7 99 0.0 0.0 0.0 7.0 112 chr3L 5271167 intron shep - chr3L 5271223 intron shep - chr3L 5271279 intron shep - chr3L_7_5270001 chr3L_5270001 Sg4 1168 chr3L 5327443 5327477 chr3L 5327553 5327587 9 109 6.5 2.0 4.2 1.7 144 chr3L 5327443 intergenic not near genes chr3L 5327515 intergenic not near genes chr3L 5327587 intergenic not near genes chr3L_9_5325001 chr3L_5325001 Sg4 1169 chr3L 5339815 5339852 chr3L 5340074 5340121 10 268 5.0 4.5 4.8 1.7 306 chr3L 5339815 intergenic not near genes chr3L 5339968 intergenic not near genes chr3L 5340121 intergenic not near genes chr3L_10_5335001 chr3L_5335001 Sg4 1170 chr3L 5376023 5376040 chr3L 5376127 5376144 4 104 0.0 1.5 0.8 2.2 121 chr3L 5376023 intergenic not near genes chr3L 5376084 intergenic not near genes chr3L 5376144 intergenic not near genes chr3L_4_5375001 chr3L_5375001 Sg4 1171 chr3L 5384293 5384340 chr3L 5384389 5384445 12 102 1.0 4.5 2.8 3.2 152 chr3L 5384293 intergenic not near genes chr3L 5384369 intergenic not near genes chr3L 5384445 intergenic not near genes chr3L_12_5380001 chr3L_5380001 Sg4 1172 chr3L 5388179 5388232 chr3L 5388528 5388581 10 349 6.5 4.0 5.2 1.6 402 chr3L 5388179 intergenic not near genes chr3L 5388380 intergenic not near genes chr3L 5388581 intergenic not near genes chr3L_10_5385001 chr3L_5385001 Sg4 1173 chr3L 5458059 5458089 chr3L 5466673 5466716 Max-element 4 8624 5.0 3.5 4.2 0.8 8657 chr3L 5458059 intergenic not near genes chr3L 5462388 intergenic not near genes chr3L 5466716 intergenic not near genes chr3L_4_5460001 chr3L_5460001 Sg4 1174 chr3L 5498377 5498414 chr3L 5498481 5498516 4 108 0.0 1.5 0.8 2.2 139 chr3L 5498377 exon blanks - chr3L 5498446 exon blanks - chr3L 5498516 exon blanks - chr3L_4_5495001 chr3L_5495001 Sg4 1175 chr3L 5537139 5537183 chr3L 5537271 5537315 13 131 3.5 3.5 3.5 2.9 176 chr3L 5537139 intergenic not near genes chr3L 5537227 intergenic not near genes chr3L 5537315 intergenic not near genes chr3L_13_5535001 chr3L_5535001 Sg4 1176 chr3L 5558609 5558648 chr3L 5558748 5558784 13 139 5.0 6.0 5.5 2.0 175 chr3L 5558609 intergenic not near genes chr3L 5558696 intergenic not near genes chr3L 5558784 intergenic not near genes chr3L_13_5555001 chr3L_5555001 Sg4 1177 chr3L 5597645 5597680 chr3L 5597958 5598011 6 325 1.5 0.0 0.8 3.3 366 chr3L 5597645 intergenic CG5150 + chr3L 5597828 intergenic CG5150 + chr3L 5598011 intergenic not near genes chr3L_6_5595001 chr3L_5595001 Sg4 1178 chr3L 5641224 5641230 chr3L 5641322 5641333 6 102 10.5 5.5 8.0 0.7 109 chr3L 5641224 intron Blimp-1 + chr3L 5641278 intron Blimp-1 + chr3L 5641333 intron Blimp-1 + chr3L_6_5640001 chr3L_5640001 Sg4 1179 chr3L 5641242 5641260 chr3L 5641314 5641361 11 97 3.5 4.5 4.0 2.2 119 chr3L 5641242 intron Blimp-1 + chr3L 5641302 intron Blimp-1 + chr3L 5641361 intron Blimp-1 + chr3L_11_5640001 chr3L_5640001 Sg4 1180 chr3L 5838904 5838955 chr3L 5839117 5839167 12 212 0.0 6.0 3.0 3.0 263 chr3L 5838904 intron vn - chr3L 5839036 intron vn - chr3L 5839167 intron vn - chr3L_12_5835001 chr3L_5835001 Sg4 1181 chr3L 5854449 5854488 chr3L 5854766 5854808 11 313 4.0 7.5 5.8 1.6 359 chr3L 5854449 intergenic not near genes chr3L 5854628 intergenic not near genes chr3L 5854808 intergenic not near genes chr3L_11_5850001 chr3L_5850001 Sg4 1182 chr3L 5910016 5910058 chr3L 5910282 5910324 pogo 10 266 3.0 5.5 4.2 1.9 308 chr3L 5910016 intron CG13288 + chr3L 5910170 intron CG13288 + chr3L 5910324 intron CG13288 + chr3L_10_5910001 chr3L_5910001 Sg4 1183 chr3L 5926297 5926301 chr3L 5926511 5926516 4 215 11.0 4.5 7.8 0.5 219 chr3L 5926297 intron Vap-33B + chr3L 5926406 intron Vap-33B + chr3L 5926516 intron Vap-33B + chr3L_4_5925001 chr3L_5925001 Sg4 1184 chr3L 5926305 5926336 chr3L 5926510 5926551 BS 10 213 6.5 4.0 5.2 1.6 246 chr3L 5926305 intron Vap-33B + chr3L 5926428 intron Vap-33B + chr3L 5926551 intron Vap-33B + chr3L_10_5925001 chr3L_5925001 Sg4 1185 chr3L 5983806 5983866 chr3L 5983952 5984012 18 146 6.5 0.0 3.2 4.3 206 chr3L 5983806 3` UTR CR45439 - chr3L 5983909 intergenic CR45439 -,CR45440 - chr3L 5984012 intergenic CR45440 -,CR45439 - chr3L_18_5980001 chr3L_5980001 Sg4 1186 chr3L 5992577 5992621 chr3L 5992704 5992748 11 127 4.0 4.0 4.0 2.2 171 chr3L 5992577 intergenic not near genes chr3L 5992662 intergenic not near genes chr3L 5992748 intergenic not near genes chr3L_11_5990001 chr3L_5990001 Sg4 1187 chr3L 6001659 6001710 chr3L 6004384 6004420 jockey 4 2721 6.0 0.5 3.2 1.0 2761 chr3L 6001659 intron PVRAP + chr3L 6003040 intron PVRAP + chr3L 6004420 intron PVRAP + chr3L_4_6000001 chr3L_6000001 Sg4 1188 chr3L 6022319 6022349 chr3L 6022423 6022453 12 104 0.0 7.0 3.5 2.7 134 chr3L 6022319 intron PVRAP + chr3L 6022386 intron PVRAP + chr3L 6022453 intron PVRAP + chr3L_12_6020001 chr3L_6020001 Sg4 1189 chr3L 6040340 6040387 chr3L 6042721 6042762 Doc 10 2380 1.0 1.5 1.2 4.5 2422 chr3L 6040340 intergenic Jon65Aiv + chr3L 6041551 intergenic not near genes chr3L 6042762 intergenic not near genes chr3L_10_6040001 chr3L_6040001 Sg4 1190 chr3L 6052643 6052667 chr3L 6052738 6052772 15 107 6.5 10.5 8.5 1.6 129 chr3L 6052643 exon Jon65Aii + chr3L 6052708 intron Jon65Aii + chr3L 6052772 exon Jon65Aii + chr3L_15_6050001 chr3L_6050001 Sg4 1191 chr3L 6064996 6065039 chr3L 6065098 6065141 5 102 2.0 2.0 2.0 1.7 145 chr3L 6064996 intergenic not near genes chr3L 6065068 intergenic not near genes chr3L 6065141 intergenic not near genes chr3L_5_6065001 chr3L_6065001 Sg4 1192 chr3L 6169106 6169129 chr3L 6169211 6169235 11 105 8.0 5.0 6.5 1.5 129 chr3L 6169106 3` UTR CG10289 - chr3L 6169170 3` UTR CG10289 - chr3L 6169235 3` UTR CG10289 - chr3L_11_6165001 chr3L_6165001 Sg4 1193 chr3L 6220892 6220939 chr3L 6230069 6230116 roo 10 9177 3.0 4.0 3.5 2.2 9224 chr3L 6220892 5` UTR pncr008:3L + chr3L 6225504 intergenic not near genes chr3L 6230116 intergenic not near genes chr3L_10_6225001 chr3L_6225001 Sg4 1194 chr3L 6231149 6231358 chr3L 6231255 6231469 5 108 1.5 3.0 2.2 1.6 320 chr3L 6231149 intergenic not near genes chr3L 6231309 intergenic CG13299 - chr3L 6231469 intergenic CG13299 - chr3L_5_6230001 chr3L_6230001 Sg4 1195 chr3L 6334637 6334677 chr3L 6334746 6334786 18 108 6.0 6.5 6.2 2.5 149 chr3L 6334637 intron CG13300 - chr3L 6334712 intron CG13300 - chr3L 6334786 intron CG13300 - chr3L_18_6330001 chr3L_6330001 Sg4 1196 chr3L 6334985 6335013 chr3L 6335481 6335499 297 13 495 5.0 2.0 3.5 2.9 514 chr3L 6334985 intron CG13300 - chr3L 6335242 intron CG13300 - chr3L 6335499 intron CG13300 - chr3L_13_6335001 chr3L_6335001 Sg4 1197 chr3L 6335014 6335038 chr3L 6335480 6335534 297 7 488 3.0 2.0 2.5 2.0 520 chr3L 6335014 intron CG13300 - chr3L 6335274 intron CG13300 - chr3L 6335534 intron CG13300 - chr3L_7_6335001 chr3L_6335001 Sg4 1198 chr3L 6358609 6358651 chr3L 6358711 6358753 7 102 4.5 3.5 4.0 1.4 144 chr3L 6358609 intergenic not near genes chr3L 6358681 intergenic not near genes chr3L 6358753 intergenic not near genes chr3L_7_6355001 chr3L_6355001 Sg4 1199 chr3L 6405644 6405677 chr3L 6432133 6432166 roo 6 26489 5.0 4.0 4.5 1.1 26522 chr3L 6405644 intron CG42747 + chr3L 6418905 intron CG42747 + chr3L 6432166 intron CG42747 + chr3L_6_6415001 chr3L_6415001 Sg4 1200 chr3L 6503972 6504032 chr3L 6505580 6505635 27 1607 4.5 2.0 3.2 6.4 1663 chr3L 6503972 intron sfl + chr3L 6504804 intron sfl + chr3L 6505635 intron sfl + chr3L_27_6500001 chr3L_6500001 Sg4 1201 chr3L 6559704 6559756 chr3L 6559939 6559991 9 234 4.0 5.0 4.5 1.6 287 chr3L 6559704 intron CG18769 + chr3L 6559848 intron CG18769 + chr3L 6559991 intron CG18769 + chr3L_9_6555001 chr3L_6555001 Sg4 1202 chr3L 6620591 6620605 chr3L 6621054 6621069 Rt1c 5 464 4.0 13.0 8.5 0.5 478 chr3L 6620591 intergenic not near genes chr3L 6620830 intergenic not near genes chr3L 6621069 intergenic not near genes chr3L_5_6620001 chr3L_6620001 Sg4 1203 chr3L 6623462 6623506 chr3L 6623578 6623627 10 119 4.5 6.0 5.2 1.6 165 chr3L 6623462 intergenic not near genes chr3L 6623544 intergenic GluRIA + chr3L 6623627 intergenic GluRIA + chr3L_10_6620001 chr3L_6620001 Sg4 1204 chr3L 6713116 6713143 chr3L 6713801 6713828 5 685 11.5 4.5 8.0 0.6 712 chr3L 6713116 intergenic ple - chr3L 6713472 3` UTR ple - chr3L 6713828 3` UTR ple - chr3L_5_6710001 chr3L_6710001 Sg4 1205 chr3L 6727764 6727811 chr3L 6727887 6727934 7 123 1.5 0.5 1.0 3.5 170 chr3L 6727764 intergenic CR45417 + chr3L 6727849 intergenic CR45417 + chr3L 6727934 intergenic CR45417 + chr3L_7_6725001 chr3L_6725001 Sg4 1206 chr3L 6781105 6781154 chr3L 6783143 6783189 Doc 4 2035 0.5 0.0 0.2 3.3 2084 chr3L 6781105 intergenic not near genes chr3L 6782147 intergenic not near genes chr3L 6783189 intergenic not near genes chr3L_4_6780001 chr3L_6780001 Sg4 1207 chr3L 6826200 6826218 chr3L 6826301 6826308 6 99 9.5 10.0 9.8 0.6 108 chr3L 6826200 intergenic not near genes chr3L 6826254 intergenic not near genes chr3L 6826308 intergenic not near genes chr3L_6_6825001 chr3L_6825001 Sg4 1208 chr3L 6829234 6829278 chr3L 6829352 6829395 9 118 0.0 0.0 0.0 9.0 161 chr3L 6829234 intergenic not near genes chr3L 6829314 intergenic not near genes chr3L 6829395 intergenic not near genes chr3L_9_6825001 chr3L_6825001 Sg4 1209 chr3L 6855906 6855951 chr3L 6860716 6860761 Doc 9 4810 5.0 3.0 4.0 1.8 4855 chr3L 6855906 intergenic not near genes chr3L 6858334 intergenic not near genes chr3L 6860761 intergenic not near genes chr3L_9_6855001 chr3L_6855001 Sg4 1210 chr3L 6887506 6887542 chr3L 6895023 6895059 roo 8 7517 2.5 3.5 3.0 2.0 7553 chr3L 6887506 intergenic not near genes chr3L 6891282 intergenic not near genes chr3L 6895059 intergenic not near genes chr3L_8_6890001 chr3L_6890001 Sg4 1211 chr3L 6942046 6942084 chr3L 6942170 6942193 5 121 3.5 4.5 4.0 1.0 147 chr3L 6942046 intergenic not near genes chr3L 6942120 intergenic not near genes chr3L 6942193 intergenic not near genes chr3L_5_6940001 chr3L_6940001 Sg4 1212 chr3L 6989270 6989323 chr3L 6989373 6989422 6 102 3.0 3.0 3.0 1.5 152 chr3L 6989270 intergenic not near genes chr3L 6989346 intergenic not near genes chr3L 6989422 intergenic not near genes chr3L_6_6985001 chr3L_6985001 Sg4 1213 chr3L 7033155 7033185 chr3L 7033260 7033290 20 103 6.5 6.0 6.2 2.8 135 chr3L 7033155 intron Mp + chr3L 7033222 intron Mp + chr3L 7033290 intron Mp + chr3L_20_7030001 chr3L_7030001 Sg4 1214 chr3L 7041899 7041915 chr3L 7042001 7042017 7 102 3.5 2.5 3.0 1.8 118 chr3L 7041899 intron Mp + chr3L 7041958 intron Mp + chr3L 7042017 intron Mp + chr3L_7_7040001 chr3L_7040001 Sg4 1215 chr3L 7100409 7100466 chr3L 7100521 7100548 11 104 2.0 3.5 2.8 2.9 139 chr3L 7100409 intron form3 + chr3L 7100478 intron form3 + chr3L 7100548 intron form3 + chr3L_11_7100001 chr3L_7100001 Sg4 1216 chr3L 7216089 7216137 chr3L 7216192 7216228 11 102 5.5 3.5 4.5 2.0 139 chr3L 7216089 intergenic not near genes chr3L 7216158 intergenic not near genes chr3L 7216228 intergenic not near genes chr3L_11_7215001 chr3L_7215001 Sg4 1217 chr3L 7217899 7217938 chr3L 7218040 7218079 12 140 3.5 6.0 4.8 2.1 180 chr3L 7217899 intergenic not near genes chr3L 7217989 intergenic not near genes chr3L 7218079 intergenic not near genes chr3L_12_7215001 chr3L_7215001 Sg4 1218 chr3L 7236607 7236621 chr3L 7236808 7236822 6 201 3.5 4.0 3.8 1.2 215 chr3L 7236607 intergenic CG14829 - chr3L 7236714 intergenic CG14829 - chr3L 7236822 3` UTR CG14829 - chr3L_6_7235001 chr3L_7235001 Sg4 1219 chr3L 7258981 7259033 chr3L 7259125 7259177 10 141 0.0 3.5 1.8 3.6 196 chr3L 7258981 intron CG14830 - chr3L 7259079 intron CG14830 - chr3L 7259177 intron CG14830 - chr3L_10_7255001 chr3L_7255001 Sg4 1220 chr3L 7285428 7285476 chr3L 7285531 7285579 9 103 0.5 3.0 1.8 3.2 151 chr3L 7285428 intron unc-13-4A - chr3L 7285504 intron unc-13-4A - chr3L 7285579 intron unc-13-4A - chr3L_9_7285001 chr3L_7285001 Sg4 1221 chr3L 7288382 7288407 chr3L 7288492 7288517 5 110 0.0 4.0 2.0 1.7 135 chr3L 7288382 intron unc-13-4A - chr3L 7288450 intron unc-13-4A - chr3L 7288517 intron unc-13-4A - chr3L_5_7285001 chr3L_7285001 Sg4 1222 chr3L 7358270 7358322 chr3L 7359579 7359631 13 1306 25.0 32.0 28.5 0.4 1361 chr3L 7358270 exon pst - chr3L 7358950 exon pst - chr3L 7359631 intron pst - chr3L_13_7355001 chr3L_7355001 Sg4 1223 chr3L 7377295 7377341 chr3L 7380419 7380471 297 15 3128 5.0 5.5 5.2 2.4 3176 chr3L 7377295 intron SMSr - chr3L 7378883 intron SMSr - chr3L 7380471 intron SMSr - chr3L_15_7375001 chr3L_7375001 Sg4 1224 chr3L 7411649 7411701 chr3L 7411761 7411813 11 112 2.5 3.5 3.0 2.8 164 chr3L 7411649 intergenic not near genes chr3L 7411731 intergenic not near genes chr3L 7411813 intergenic not near genes chr3L_11_7410001 chr3L_7410001 Sg4 1225 chr3L 7416871 7416922 chr3L 7418598 7418647 10 1724 2.0 2.5 2.2 3.1 1776 chr3L 7416871 intergenic not near genes chr3L 7417759 intergenic not near genes chr3L 7418647 intergenic not near genes chr3L_10_7415001 chr3L_7415001 Sg4 1226 chr3L 7495858 7495904 chr3L 7495959 7496005 9 101 1.5 2.5 2.0 3.0 147 chr3L 7495858 intron Cyp4d8 - chr3L 7495932 intron Cyp4d8 - chr3L 7496005 intron Cyp4d8 - chr3L_9_7495001 chr3L_7495001 Sg4 1227 chr3L 7496569 7496623 chr3L 7497330 7497384 8 761 1.5 3.5 2.5 2.3 815 chr3L 7496569 intergenic Cyp4d8 - chr3L 7496976 intergenic CG8539 - chr3L 7497384 3` UTR CG8539 - chr3L_8_7495001 chr3L_7495001 Sg4 1228 chr3L 7498747 7498785 chr3L 7503549 7503585 F-element 8 4802 3.5 4.5 4.0 1.6 4838 chr3L 7498747 5` UTR CG8539 - chr3L 7501166 intergenic not near genes chr3L 7503585 intergenic not near genes chr3L_8_7500001 chr3L_7500001 Sg4 1229 chr3L 7508653 7508703 chr3L 7508762 7508798 15 107 3.0 0.0 1.5 6.0 145 chr3L 7508653 intergenic not near genes chr3L 7508726 intergenic not near genes chr3L 7508798 intergenic not near genes chr3L_15_7505001 chr3L_7505001 Sg4 1230 chr3L 7591131 7591146 chr3L 7591247 7591262 4 115 7.5 4.0 5.8 0.6 131 chr3L 7591131 intergenic CG7716 - chr3L 7591196 intergenic CG7716 - chr3L 7591262 intergenic CG7716 - chr3L_4_7590001 chr3L_7590001 Sg4 1231 chr3L 7591147 7591174 chr3L 7591246 7591290 9 109 5.5 4.0 4.8 1.6 143 chr3L 7591147 intergenic CG7716 - chr3L 7591218 intergenic CG7716 - chr3L 7591290 intergenic CG7716 - chr3L_9_7590001 chr3L_7590001 Sg4 1232 chr3L 7793696 7793735 chr3L 7800773 7800812 297 7 7077 1.0 3.5 2.2 2.2 7116 chr3L 7793696 intron CG32369 - chr3L 7797254 intron CG32369 - chr3L 7800812 intron CG32369 - chr3L_7_7795001 chr3L_7795001 Sg4 1233 chr3L 7801715 7801769 chr3L 7801979 7802033 9 264 4.0 2.0 3.0 2.2 318 chr3L 7801715 intron CG32369 - chr3L 7801874 intron CG32369 - chr3L 7802033 intron CG32369 - chr3L_9_7800001 chr3L_7800001 Sg4 1234 chr3L 7822272 7822303 chr3L 7822395 7822426 7 123 1.0 0.5 0.8 3.9 154 chr3L 7822272 intron Pdp1 - chr3L 7822349 intron Pdp1 - chr3L 7822426 intron Pdp1 - chr3L_7_7820001 chr3L_7820001 Sg4 1235 chr3L 7835396 7835444 chr3L 7835499 7835547 22 103 6.0 3.5 4.8 3.8 151 chr3L 7835396 intron Pdp1 - chr3L 7835472 intron Pdp1 - chr3L 7835547 intron Pdp1 - chr3L_22_7835001 chr3L_7835001 Sg4 1236 chr3L 7875002 7875047 chr3L 7876857 7876902 5 1855 6.5 13.5 10.0 0.5 1900 chr3L 7875002 intron CG32365 + chr3L 7875952 intron CG32365 + chr3L 7876902 intron CG32365 + chr3L_5_7875001 chr3L_7875001 Sg4 1237 chr3L 7883720 7883745 chr3L 7883902 7883927 5 182 2.0 0.0 1.0 2.5 207 chr3L 7883720 intron CG32365 + chr3L 7883824 intron CG32365 + chr3L 7883927 intron CG32365 + chr3L_5_7880001 chr3L_7880001 Sg4 1238 chr3L 7886502 7886544 chr3L 7889045 7889087 Stalker4 5 2543 3.5 4.0 3.8 1.0 2585 chr3L 7886502 intron CG32365 + chr3L 7887794 intron CG32365 + chr3L 7889087 intron CG32365 + chr3L_5_7885001 chr3L_7885001 Sg4 1239 chr3L 7916538 7916582 chr3L 7916646 7916690 6 108 1.0 2.5 1.8 2.1 152 chr3L 7916538 intergenic syd - chr3L 7916614 intergenic syd - chr3L 7916690 3` UTR syd - chr3L_6_7915001 chr3L_7915001 Sg4 1240 chr3L 7916810 7916851 chr3L 7926006 7926047 roo 9 9196 0.0 1.0 0.5 6.0 9237 chr3L 7916810 3` UTR syd - chr3L 7921428 intron syd - chr3L 7926047 3` UTR syd - chr3L_9_7920001 chr3L_7920001 Sg4 1241 chr3L 7939444 7939467 chr3L 7939551 7939574 9 107 2.5 5.0 3.8 1.9 130 chr3L 7939444 intergenic not near genes chr3L 7939509 intergenic not near genes chr3L 7939574 intergenic not near genes chr3L_9_7935001 chr3L_7935001 Sg4 1242 chr3L 7985351 7985387 chr3L 7987704 7987740 NOF 11 2353 3.0 5.0 4.0 2.2 2389 chr3L 7985351 intron nmo + chr3L 7986546 intron nmo + chr3L 7987740 intron nmo + chr3L_11_7985001 chr3L_7985001 Sg4 1243 chr3L 8026471 8026512 chr3L 8026658 8026699 7 187 1.5 2.0 1.8 2.5 228 chr3L 8026471 intron nmo + chr3L 8026585 intron nmo + chr3L 8026699 intron nmo + chr3L_7_8025001 chr3L_8025001 Sg4 1244 chr3L 8062833 8062858 chr3L 8062926 8062962 9 102 6.0 3.0 4.5 1.6 129 chr3L 8062833 intergenic not near genes chr3L 8062898 intergenic not near genes chr3L 8062962 intergenic not near genes chr3L_9_8060001 chr3L_8060001 Sg4 1245 chr3L 8064656 8064668 chr3L 8064817 8064823 7 160 2.0 4.0 3.0 1.8 167 chr3L 8064656 intron Ect4 + chr3L 8064740 intron Ect4 + chr3L 8064823 intron Ect4 + chr3L_7_8060001 chr3L_8060001 Sg4 1246 chr3L 8081410 8081447 chr3L 8081517 8081555 9 108 5.0 3.0 4.0 1.8 145 chr3L 8081410 intron Ect4 + chr3L 8081482 intron Ect4 + chr3L 8081555 intron Ect4 + chr3L_9_8080001 chr3L_8080001 Sg4 1247 chr3L 8149745 8149775 chr3L 8149876 8149906 5 131 5.0 1.0 3.0 1.2 161 chr3L 8149745 intron CG13676 - chr3L 8149826 intron CG13676 - chr3L 8149906 intron CG13676 - chr3L_5_8145001 chr3L_8145001 Sg4 1248 chr3L 8208104 8208152 chr3L 8208261 8208303 12 156 6.5 4.5 5.5 1.8 199 chr3L 8208104 intergenic not near genes chr3L 8208204 intergenic not near genes chr3L 8208303 intergenic not near genes chr3L_12_8205001 chr3L_8205001 Sg4 1249 chr3L 8233569 8233588 chr3L 8238856 8238875 Rt1a 4 5287 5.0 7.0 6.0 0.6 5306 chr3L 8233569 intron CG7213 - chr3L 8236222 intron CG7213 - chr3L 8238875 intron,intron CG7213 -,Dscam4 + chr3L_4_8235001 chr3L_8235001 Sg4 1250 chr3L 8255928 8255957 chr3L 8256206 8256250 4 289 8.5 3.5 6.0 0.6 322 chr3L 8255928 intron Dscam4 + chr3L 8256089 intron Dscam4 + chr3L 8256250 intron Dscam4 + chr3L_4_8255001 chr3L_8255001 Sg4 1251 chr3L 8295783 8295813 chr3L 8295966 8295996 7 183 8.5 7.0 7.8 0.8 213 chr3L 8295783 intergenic CG7201 - chr3L 8295890 intergenic not near genes chr3L 8295996 intergenic not near genes chr3L_7_8295001 chr3L_8295001 Sg4 1252 chr3L 8327471 8327517 chr3L 8329886 8329932 12 2414 5.0 3.5 4.2 2.3 2461 chr3L 8327471 3` UTR CG34461 + chr3L 8328702 exon CG34462 + chr3L 8329932 exon CG34462 + chr3L_12_8325001 chr3L_8325001 Sg4 1253 chr3L 8413841 8413860 chr3L 8413945 8413964 9 104 1.5 1.5 1.5 3.6 123 chr3L 8413841 intron,3` UTR Exo70 +,mtrm + chr3L 8413902 intron,3` UTR Exo70 +,mtrm + chr3L 8413964 intron,3` UTR Exo70 +,mtrm + chr3L_9_8410001 chr3L_8410001 Sg4 1254 chr3L 8442896 8442905 chr3L 8442997 8443006 4 100 0.0 2.5 1.2 1.8 110 chr3L 8442896 intergenic CG6983 - chr3L 8442951 intergenic CG6983 - chr3L 8443006 intergenic CG6983 - chr3L_4_8440001 chr3L_8440001 Sg4 1255 chr3L 8443571 8443581 chr3L 8443678 8443688 4 106 3.5 4.5 4.0 0.8 117 chr3L 8443571 3` UTR CG6983 - chr3L 8443630 3` UTR CG6983 - chr3L 8443688 3` UTR CG6983 - chr3L_4_8440001 chr3L_8440001 Sg4 1256 chr3L 8456459 8456482 chr3L 8456575 8456598 11 114 5.5 9.0 7.2 1.3 139 chr3L 8456459 intron Gug + chr3L 8456528 intron Gug + chr3L 8456598 intron Gug + chr3L_11_8455001 chr3L_8455001 Sg4 1257 chr3L 8481792 8481799 chr3L 8490946 8490956 roo 4 9160 6.5 11.0 8.8 0.4 9164 chr3L 8481792 intron CG43163 - chr3L 8486374 intron CG43163 - chr3L 8490956 intron CG43163 - chr3L_4_8485001 chr3L_8485001 Sg4 1258 chr3L 8497880 8497922 chr3L 8498011 8498053 7 131 2.5 0.5 1.5 2.8 173 chr3L 8497880 intron CG43163 - chr3L 8497966 intron CG43163 - chr3L 8498053 intron CG43163 - chr3L_7_8495001 chr3L_8495001 Sg4 1259 chr3L 8498296 8498321 chr3L 8505788 8505813 blood 7 7492 0.0 5.0 2.5 2.0 7517 chr3L 8498296 intron CG43163 - chr3L 8502054 intron CG43163 - chr3L 8505813 intron CG43163 - chr3L_7_8500001 chr3L_8500001 Sg4 1260 chr3L 8576251 8576273 chr3L 8576369 8576392 6 119 2.5 3.5 3.0 1.5 141 chr3L 8576251 intergenic CG6638 - chr3L 8576322 intergenic CG6638 -,CG43078 + chr3L 8576392 intergenic CG6638 -,CG43078 + chr3L_6_8575001 chr3L_8575001 Sg4 1261 chr3L 8791257 8791286 chr3L 8796702 8796731 I-element 14 5445 7.5 7.5 7.5 1.6 5474 chr3L 8791257 exon Fhos + chr3L 8793994 intron Fhos + chr3L 8796731 intron Fhos + chr3L_14_8790001 chr3L_8790001 Sg4 1262 chr3L 8839721 8839739 chr3L 8839826 8839844 6 104 2.0 4.0 3.0 1.5 123 chr3L 8839721 intron dally + chr3L 8839782 intron dally + chr3L 8839844 intron dally + chr3L_6_8835001 chr3L_8835001 Sg4 1263 chr3L 8865003 8865029 chr3L 8865289 8865294 12 280 5.0 9.5 7.2 1.5 291 chr3L 8865003 intron dally + chr3L 8865148 intron dally + chr3L 8865294 intron dally + chr3L_12_8865001 chr3L_8865001 Sg4 1264 chr3L 8924405 8924459 chr3L 8924513 8924567 10 107 2.5 2.0 2.2 3.1 162 chr3L 8924405 intron Tsp66E + chr3L 8924486 intron Tsp66E + chr3L 8924567 intron Tsp66E + chr3L_10_8920001 chr3L_8920001 Sg4 1265 chr3L 8928247 8928296 chr3L 8928348 8928396 6 100 3.0 1.5 2.2 1.9 149 chr3L 8928247 intron Tsp66E + chr3L 8928322 intron Tsp66E + chr3L 8928396 intron Tsp66E + chr3L_6_8925001 chr3L_8925001 Sg4 1266 chr3L 8928617 8928656 chr3L 8928705 8928761 9 100 2.5 5.5 4.0 1.8 144 chr3L 8928617 intron Tsp66E + chr3L 8928689 intron Tsp66E + chr3L 8928761 intron Tsp66E + chr3L_9_8925001 chr3L_8925001 Sg4 1267 chr3L 9003919 9003976 chr3L 9004029 9004086 19 109 4.5 3.0 3.8 4.0 167 chr3L 9003919 intergenic not near genes chr3L 9004002 intergenic not near genes chr3L 9004086 intergenic not near genes chr3L_19_9000001 chr3L_9000001 Sg4 1268 chr3L 9076902 9076948 chr3L 9084487 9084533 412 15 7584 8.5 7.0 7.8 1.7 7631 chr3L 9076902 exon Tequila + chr3L 9080718 intron Tequila + chr3L 9084533 exon Tequila + chr3L_15_9080001 chr3L_9080001 Sg4 1269 chr3L 9111128 9111179 chr3L 9111229 9111280 5 101 1.5 5.5 3.5 1.1 152 chr3L 9111128 intron bol - chr3L 9111204 intron bol - chr3L 9111280 intron bol - chr3L_5_9110001 chr3L_9110001 Sg4 1270 chr3L 9125771 9125798 chr3L 9125873 9125900 7 102 4.0 4.5 4.2 1.3 129 chr3L 9125771 intron bol - chr3L 9125836 intron bol - chr3L 9125900 intron bol - chr3L_7_9125001 chr3L_9125001 Sg4 1271 chr3L 9129169 9129223 chr3L 9129273 9129323 12 104 3.0 4.0 3.5 2.7 154 chr3L 9129169 intron bol - chr3L 9129246 intron bol - chr3L 9129323 intron bol - chr3L_12_9125001 chr3L_9125001 Sg4 1272 chr3L 9130531 9130570 chr3L 9134317 9134355 412 19 3784 2.5 4.5 3.5 4.2 3824 chr3L 9130531 intergenic bol - chr3L 9132443 intergenic not near genes chr3L 9134355 intergenic Dhpr + chr3L_19_9130001 chr3L_9130001 Sg4 1273 chr3L 9164672 9164708 chr3L 9166164 9166200 hobo 7 1492 5.0 0.0 2.5 2.0 1528 chr3L 9164672 intron Rdl - chr3L 9165436 intron Rdl - chr3L 9166200 intron Rdl - chr3L_7_9165001 chr3L_9165001 Sg4 1274 chr3L 9167262 9167304 chr3L 9167368 9167410 4 106 3.0 1.0 2.0 1.3 148 chr3L 9167262 intron Rdl - chr3L 9167336 intron Rdl - chr3L 9167410 intron Rdl - chr3L_4_9165001 chr3L_9165001 Sg4 1275 chr3L 9219221 9219267 chr3L 9219918 9219964 jockey 20 696 7.5 8.0 7.8 2.3 743 chr3L 9219221 intergenic not near genes chr3L 9219592 intergenic not near genes chr3L 9219964 intergenic not near genes chr3L_20_9215001 chr3L_9215001 Sg4 1276 chr3L 9270597 9270641 chr3L 9278377 9278403 roo 7 7776 4.0 4.0 4.0 1.4 7806 chr3L 9270597 intron GluRIB + chr3L 9274500 intron GluRIB + chr3L 9278403 exon GluRIB + chr3L_7_9270001 chr3L_9270001 Sg4 1277 chr3L 9501711 9501733 chr3L 9502219 9502241 roo 8 508 5.0 7.0 6.0 1.1 530 chr3L 9501711 intron path - chr3L 9501976 intron path - chr3L 9502241 intron path - chr3L_8_9500001 chr3L_9500001 Sg4 1278 chr3L 9502594 9502640 chr3L 9502699 9502745 4 105 3.0 2.5 2.8 1.1 151 chr3L 9502594 intron path - chr3L 9502670 intron path - chr3L 9502745 intron path - chr3L_4_9500001 chr3L_9500001 Sg4 1279 chr3L 9503439 9503457 chr3L 9503553 9503571 8 114 0.5 2.5 1.5 3.2 132 chr3L 9503439 intron path - chr3L 9503505 intron path - chr3L 9503571 intron path - chr3L_8_9500001 chr3L_9500001 Sg4 1280 chr3L 9515502 9515551 chr3L 9515807 9515856 15 304 1.5 4.0 2.8 3.9 354 chr3L 9515502 intron CG33700 - chr3L 9515679 intron CG33700 - chr3L 9515856 intron CG33700 - chr3L_15_9515001 chr3L_9515001 Sg4 1281 chr3L 9526472 9526514 chr3L 9528172 9528210 Doc 5 1702 1.5 3.0 2.2 1.6 1738 chr3L 9526472 intergenic not near genes chr3L 9527341 intergenic not near genes chr3L 9528210 intergenic not near genes chr3L_5_9525001 chr3L_9525001 Sg4 1282 chr3L 9532479 9532515 chr3L 9532594 9532636 5 120 1.0 4.5 2.8 1.3 157 chr3L 9532479 intergenic not near genes chr3L 9532558 intergenic not near genes chr3L 9532636 intergenic not near genes chr3L_5_9530001 chr3L_9530001 Sg4 1283 chr3L 9533727 9533762 chr3L 9541312 9541347 412 8 7584 4.5 18.0 11.2 0.7 7620 chr3L 9533727 intergenic not near genes chr3L 9537537 intergenic not near genes chr3L 9541347 intergenic not near genes chr3L_8_9535001 chr3L_9535001 Sg4 1284 chr3L 9571882 9571922 chr3L 9572255 9572295 jockey 7 373 3.0 2.0 2.5 2.0 413 chr3L 9571882 intron CG42673 + chr3L 9572088 intron CG42673 + chr3L 9572295 intron CG42673 + chr3L_7_9570001 chr3L_9570001 Sg4 1285 chr3L 9572273 9572327 chr3L 9572377 9572431 11 103 2.0 0.5 1.2 5.0 158 chr3L 9572273 intron CG42673 + chr3L 9572352 intron CG42673 + chr3L 9572431 intron CG42673 + chr3L_11_9570001 chr3L_9570001 Sg4 1286 chr3L 9575886 9575941 chr3L 9580988 9581046 jockey 9 5100 6.0 3.0 4.5 1.6 5160 chr3L 9575886 intron CG42673 + chr3L 9578466 intron CG42673 + chr3L 9581046 intron CG42673 + chr3L_9_9575001 chr3L_9575001 Sg4 1287 chr3L 9639272 9639285 chr3L 9639583 9639583 7 315 9.5 2.5 6.0 1.0 311 chr3L 9639272 intron,5` UTR fry -,CG18179 + chr3L 9639428 intron,exon fry -,CG18179 + chr3L 9639583 intron,exon fry -,CG18179 + chr3L_7_9635001 chr3L_9635001 Sg4 1288 chr3L 9639287 9639307 chr3L 9639579 9639620 14 311 7.5 2.0 4.8 2.4 333 chr3L 9639287 intron,5` UTR fry -,CG18179 + chr3L 9639454 intron,exon fry -,CG18179 + chr3L 9639620 intron,exon fry -,CG18179 + chr3L_14_9635001 chr3L_9635001 Sg4 1289 chr3L 9689482 9689527 chr3L 9689587 9689632 17 105 5.5 7.0 6.2 2.4 150 chr3L 9689482 intron CG6767 - chr3L 9689557 intron CG6767 - chr3L 9689632 intron CG6767 - chr3L_17_9685001 chr3L_9685001 Sg4 1290 chr3L 9697754 9697801 chr3L 9697871 9697918 12 117 1.5 3.5 2.5 3.4 164 chr3L 9697754 intergenic not near genes chr3L 9697836 intergenic UbcD4 + chr3L 9697918 intergenic UbcD4 + chr3L_12_9695001 chr3L_9695001 Sg4 1291 chr3L 9918855 9918910 chr3L 9918975 9919030 13 120 5.0 3.0 4.0 2.6 175 chr3L 9918855 intron CG34356 + chr3L 9918942 intron CG34356 + chr3L 9919030 intron CG34356 + chr3L_13_9915001 chr3L_9915001 Sg4 1292 chr3L 9929650 9929693 chr3L 9938447 9938497 roo 11 8803 1.5 4.0 2.8 2.9 8847 chr3L 9929650 intron CG34356 + chr3L 9934074 intron CG34356 + chr3L 9938497 intron CG34356 + chr3L_11_9930001 chr3L_9930001 Sg4 1293 chr3L 9951179 9951231 chr3L 9951291 9951343 15 111 3.0 6.0 4.5 2.7 164 chr3L 9951179 intron CG34356 + chr3L 9951261 intron CG34356 + chr3L 9951343 intron CG34356 + chr3L_15_9950001 chr3L_9950001 Sg4 1294 chr3L 10077742 10077772 chr3L 10077847 10077850 6 97 2.0 0.0 1.0 3.0 108 chr3L 10077742 intron dpr6 + chr3L 10077796 intron dpr6 + chr3L 10077850 intron dpr6 + chr3L_6_10075001 chr3L_10075001 Sg4 1295 chr3L 10106527 10106578 chr3L 10108747 10108798 8 2220 21.0 4.0 12.5 0.6 2271 chr3L 10106527 intron dpr6 + chr3L 10107662 intron dpr6 + chr3L 10108798 intron dpr6 + chr3L_8_10105001 chr3L_10105001 Sg4 1296 chr3L 10127722 10127746 chr3L 10127824 10127848 10 101 6.0 0.0 3.0 2.5 126 chr3L 10127722 intron dpr6 + chr3L 10127785 intron dpr6 + chr3L 10127848 intron dpr6 + chr3L_10_10125001 chr3L_10125001 Sg4 1297 chr3L 10214717 10214831 chr3L 10214829 10214958 6 136 0.0 0.0 0.0 6.0 241 chr3L 10214717 intergenic not near genes chr3L 10214838 intergenic not near genes chr3L 10214958 intergenic not near genes chr3L_6_10210001 chr3L_10210001 Sg4 1298 chr3L 10222746 10222767 chr3L 10222851 10222872 5 104 1.0 8.0 4.5 0.9 126 chr3L 10222746 intron scramb1 - chr3L 10222809 intron scramb1 - chr3L 10222872 intron scramb1 - chr3L_5_10220001 chr3L_10220001 Sg4 1299 chr3L 10250316 10250337 chr3L 10250427 10250453 7 115 0.0 5.0 2.5 2.0 137 chr3L 10250316 intergenic not near genes chr3L 10250384 intergenic not near genes chr3L 10250453 intergenic not near genes chr3L_7_10250001 chr3L_10250001 Sg4 1300 chr3L 10298650 10298695 chr3L 10298762 10298807 7 111 0.0 3.0 1.5 2.8 157 chr3L 10298650 intergenic not near genes chr3L 10298728 intergenic not near genes chr3L 10298807 intergenic not near genes chr3L_7_10295001 chr3L_10295001 Sg4 1301 chr3L 10308713 10308766 chr3L 10308815 10308868 18 101 0.5 1.5 1.0 9.0 155 chr3L 10308713 intergenic not near genes chr3L 10308790 intergenic not near genes chr3L 10308868 intergenic not near genes chr3L_18_10305001 chr3L_10305001 Sg4 1302 chr3L 10328090 10328121 chr3L 10328227 10328258 9 137 2.0 3.0 2.5 2.6 168 chr3L 10328090 intergenic not near genes chr3L 10328174 intergenic not near genes chr3L 10328258 intergenic not near genes chr3L_9_10325001 chr3L_10325001 Sg4 1303 chr3L 10386383 10386418 chr3L 10386474 10386514 9 100 4.0 7.5 5.8 1.3 131 chr3L 10386383 intergenic CR45245 + chr3L 10386448 intergenic CR45245 + chr3L 10386514 5` UTR CR45245 + chr3L_9_10385001 chr3L_10385001 Sg4 1304 chr3L 10414928 10414972 chr3L 10417320 10417369 Doc 10 2396 2.5 5.5 4.0 2.0 2441 chr3L 10414928 intergenic CG12362 + chr3L 10416148 intergenic not near genes chr3L 10417369 intergenic not near genes chr3L_10_10415001 chr3L_10415001 Sg4 1305 chr3L 10417548 10417577 chr3L 10417650 10417679 9 101 8.0 3.5 5.8 1.3 131 chr3L 10417548 intergenic not near genes chr3L 10417614 intergenic not near genes chr3L 10417679 intergenic not near genes chr3L_9_10415001 chr3L_10415001 Sg4 1306 chr3L 10553077 10553128 chr3L 10553184 10553235 15 104 2.5 2.5 2.5 4.3 158 chr3L 10553077 intron A2bp1 + chr3L 10553156 intron A2bp1 + chr3L 10553235 intron A2bp1 + chr3L_15_10550001 chr3L_10550001 Sg4 1307 chr3L 10581973 10581983 chr3L 10582042 10582062 5 81 10.0 11.5 10.8 0.4 89 chr3L 10581973 intron A2bp1 + chr3L 10582018 intron A2bp1 + chr3L 10582062 intron A2bp1 + chr3L_5_10580001 chr3L_10580001 Sg4 1308 chr3L 10584259 10584302 chr3L 10584371 10584414 15 111 3.0 2.0 2.5 4.3 155 chr3L 10584259 intron A2bp1 + chr3L 10584336 intron A2bp1 + chr3L 10584414 intron A2bp1 + chr3L_15_10580001 chr3L_10580001 Sg4 1309 chr3L 10600435 10600477 chr3L 10600542 10600584 7 107 2.5 1.5 2.0 2.3 149 chr3L 10600435 intergenic not near genes chr3L 10600510 intergenic not near genes chr3L 10600584 intergenic not near genes chr3L_7_10600001 chr3L_10600001 Sg4 1310 chr3L 10621825 10621868 chr3L 10621937 10621980 7 112 3.0 3.5 3.2 1.7 155 chr3L 10621825 intergenic not near genes chr3L 10621902 intergenic not near genes chr3L 10621980 intergenic not near genes chr3L_7_10620001 chr3L_10620001 Sg4 1311 chr3L 10645178 10645233 chr3L 10646681 10646736 24 1497 3.5 5.0 4.2 4.6 1558 chr3L 10645178 intron CG32066 - chr3L 10645957 intron CG32066 - chr3L 10646736 intron CG32066 - chr3L_24_10645001 chr3L_10645001 Sg4 1312 chr3L 10658080 10658211 chr3L 10658182 10658363 20 134 0.0 0.0 0.0 20.0 283 chr3L 10658080 intron CG32066 - chr3L 10658222 intron CG32066 - chr3L 10658363 intron CG32066 - chr3L_20_10655001 chr3L_10655001 Sg4 1313 chr3L 10705557 10705603 chr3L 10705655 10705706 16 101 2.5 2.5 2.5 4.6 149 chr3L 10705557 intergenic not near genes chr3L 10705632 intergenic not near genes chr3L 10705706 intergenic not near genes chr3L_16_10705001 chr3L_10705001 Sg4 1314 chr3L 10762816 10762864 chr3L 10762917 10762942 15 104 4.5 7.0 5.8 2.2 126 chr3L 10762816 intergenic not near genes chr3L 10762879 intergenic not near genes chr3L 10762942 intergenic not near genes chr3L_15_10760001 chr3L_10760001 Sg4 1315 chr3L 10856271 10856329 chr3L 10856557 10856610 20 285 5.5 3.0 4.2 3.8 339 chr3L 10856271 intergenic not near genes chr3L 10856440 intergenic not near genes chr3L 10856610 intergenic not near genes chr3L_20_10855001 chr3L_10855001 Sg4 1316 chr3L 10896570 10896594 chr3L 10896802 10896826 4 232 14.0 18.5 16.2 0.2 256 chr3L 10896570 exon Aps - chr3L 10896698 intron Aps - chr3L 10896826 exon Aps - chr3L_4_10895001 chr3L_10895001 Sg4 1317 chr3L 10958183 10958225 chr3L 10958290 10958320 7 104 2.0 0.0 1.0 3.5 137 chr3L 10958183 intergenic not near genes chr3L 10958252 intergenic not near genes chr3L 10958320 intergenic not near genes chr3L_7_10955001 chr3L_10955001 Sg4 1318 chr3L 11018558 11018577 chr3L 11018669 11018688 10 111 1.5 6.0 3.8 2.1 130 chr3L 11018558 intergenic not near genes chr3L 11018623 intergenic not near genes chr3L 11018688 intergenic not near genes chr3L_10_11015001 chr3L_11015001 Sg4 1319 chr3L 11021262 11021320 chr3L 11021453 11021482 17 188 4.0 6.0 5.0 2.8 220 chr3L 11021262 intergenic not near genes chr3L 11021372 intergenic not near genes chr3L 11021482 intergenic not near genes chr3L_17_11020001 chr3L_11020001 Sg4 1320 chr3L 11029411 11029440 chr3L 11029547 11029576 6 136 4.0 4.0 4.0 1.2 165 chr3L 11029411 3` UTR CG32081 + chr3L 11029494 intergenic CG32081 + chr3L 11029576 intergenic CG32081 + chr3L_6_11025001 chr3L_11025001 Sg4 1321 chr3L 11087043 11087088 chr3L 11088856 11088902 S-element 9 1814 3.0 3.0 3.0 2.2 1859 chr3L 11087043 intron JIL-1 - chr3L 11087972 intron JIL-1 - chr3L 11088902 intron JIL-1 - chr3L_9_11085001 chr3L_11085001 Sg4 1322 chr3L 11105272 11105319 chr3L 11107008 11107025 X-element 11 1733 3.5 5.5 4.5 2.0 1753 chr3L 11105272 intergenic not near genes chr3L 11106148 intergenic not near genes chr3L 11107025 3` UTR CG32073 - chr3L_11_11105001 chr3L_11105001 Sg4 1323 chr3L 11134343 11134383 chr3L 11134465 11134505 8 121 4.0 1.0 2.5 2.3 162 chr3L 11134343 3` UTR CG42575 + chr3L 11134424 3` UTR CG42575 + chr3L 11134505 3` UTR CG42575 + chr3L_8_11130001 chr3L_11130001 Sg4 1324 chr3L 11145534 11145557 chr3L 11145649 11145657 8 112 0.0 3.5 1.8 2.9 123 chr3L 11145534 intron CG32082 + chr3L 11145596 intron CG32082 + chr3L 11145657 intron CG32082 + chr3L_8_11145001 chr3L_11145001 Sg4 1325 chr3L 11180634 11180653 chr3L 11180767 11180786 7 133 3.0 5.0 4.0 1.4 152 chr3L 11180634 intron GlcAT-P - chr3L 11180710 intron GlcAT-P - chr3L 11180786 intron GlcAT-P - chr3L_7_11180001 chr3L_11180001 Sg4 1326 chr3L 11241758 11241782 chr3L 11241865 11241889 4 107 0.0 1.5 0.8 2.2 131 chr3L 11241758 intergenic not near genes chr3L 11241824 intergenic not near genes chr3L 11241889 intergenic not near genes chr3L_4_11240001 chr3L_11240001 Sg4 1327 chr3L 11264448 11264487 chr3L 11271425 11271464 17.6 12 6976 6.5 2.0 4.2 2.3 7016 chr3L 11264448 intergenic not near genes chr3L 11267956 intergenic not near genes chr3L 11271464 intergenic not near genes chr3L_12_11265001 chr3L_11265001 Sg4 1328 chr3L 11285184 11285233 chr3L 11285360 11285409 8 174 3.5 3.5 3.5 1.8 225 chr3L 11285184 intergenic CR45404 + chr3L 11285296 intergenic CR45404 + chr3L 11285409 intergenic CR45404 + chr3L_8_11285001 chr3L_11285001 Sg4 1329 chr3L 11290600 11290652 chr3L 11290948 11290999 15 347 3.0 2.0 2.5 4.3 399 chr3L 11290600 intron CG6175 - chr3L 11290800 intron CG6175 - chr3L 11290999 intron CG6175 - chr3L_15_11290001 chr3L_11290001 Sg4 1330 chr3L 11329672 11329723 chr3L 11332897 11332953 jockey 9 3229 3.5 2.0 2.8 2.4 3281 chr3L 11329672 intergenic not near genes chr3L 11331312 intergenic not near genes chr3L 11332953 intergenic not near genes chr3L_9_11330001 chr3L_11330001 Sg4 1331 chr3L 11383951 11383997 chr3L 11384040 11384059 6 86 3.5 3.5 3.5 1.3 108 chr3L 11383951 intron CR42755 - chr3L 11384005 3` UTR CR42755 - chr3L 11384059 3` UTR CR42755 - chr3L_6_11380001 chr3L_11380001 Sg4 1332 chr3L 11397565 11397593 chr3L 11397678 11397713 6 118 3.5 8.5 6.0 0.9 148 chr3L 11397565 exon CG44362 + chr3L 11397639 exon CG44362 + chr3L 11397713 exon CG44362 + chr3L_6_11395001 chr3L_11395001 Sg4 1333 chr3L 11435535 11435591 chr3L 11435729 11435785 18 194 5.5 5.0 5.2 2.9 250 chr3L 11435535 intergenic CG6149 -,CR44548 + chr3L 11435660 5` UTR CR44548 + chr3L 11435785 5` UTR CR44548 + chr3L_18_11435001 chr3L_11435001 Sg4 1334 chr3L 11553706 11553725 chr3L 11553833 11553847 5 126 8.0 3.5 5.8 0.7 141 chr3L 11553706 intron Mob2 - chr3L 11553776 intron Mob2 - chr3L 11553847 intron Mob2 - chr3L_5_11550001 chr3L_11550001 Sg4 1335 chr3L 11579535 11579582 chr3L 11579666 11579713 11 131 2.0 2.0 2.0 3.7 178 chr3L 11579535 intergenic CG43390 - chr3L 11579624 intergenic CG43390 - chr3L 11579713 intergenic CG43390 - chr3L_11_11575001 chr3L_11575001 Sg4 1336 chr3L 11587911 11587950 chr3L 11588012 11588051 5 101 3.0 2.5 2.8 1.3 140 chr3L 11587911 intergenic rt - chr3L 11587981 intergenic rt - chr3L 11588051 intergenic rt - chr3L_5_11585001 chr3L_11585001 Sg4 1337 chr3L 11588709 11588750 chr3L 11588890 11588931 12 181 5.5 2.5 4.0 2.4 222 chr3L 11588709 intergenic not near genes chr3L 11588820 intergenic not near genes chr3L 11588931 intergenic not near genes chr3L_12_11585001 chr3L_11585001 Sg4 1338 chr3L 11597602 11597655 chr3L 11598286 11598310 15 675 9.0 16.0 12.5 1.1 708 chr3L 11597602 intron CG7368 + chr3L 11597956 intron CG7368 + chr3L 11598310 intron CG7368 + chr3L_15_11595001 chr3L_11595001 Sg4 1339 chr3L 11695641 11695691 chr3L 11695793 11695803 9 146 6.5 6.5 6.5 1.2 162 chr3L 11695641 intron CG11652 - chr3L 11695722 intron CG11652 - chr3L 11695803 intron CG11652 - chr3L_9_11695001 chr3L_11695001 Sg4 1340 chr3L 11723063 11723108 chr3L 11727883 11727928 Doc 12 4820 3.0 2.0 2.5 3.4 4865 chr3L 11723063 3` UTR Bmcp + chr3L 11725496 intron Bmcp + chr3L 11727928 3` UTR Bmcp + chr3L_12_11725001 chr3L_11725001 Sg4 1341 chr3L 11744001 11744045 chr3L 11744134 11744178 8 133 1.5 4.0 2.8 2.1 177 chr3L 11744001 exon CG6024 - chr3L 11744090 intron CG6024 - chr3L 11744178 intron CG6024 - chr3L_8_11740001 chr3L_11740001 Sg4 1342 chr3L 802565 802566 chr3L 11777678 11777678 5 10975113 23.5 25.5 24.5 0.2 10975113 chr3L 802565 intergenic not near genes chr3L 6290122 intergenic not near genes chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_5_6290001 chr3L_6290001 Sg4 1343 chr3L 7749470 7749471 chr3L 11777678 11777678 10 4028207 9.5 25.5 17.5 0.5 4028208 chr3L 7749470 intron,3` UTR CG32373 +,CG13685 + chr3L 9763574 5` UTR CG8177 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_10_9760001 chr3L_9760001 Sg4 1344 chr3L 11777678 11777678 chr3L 12163305 12163305 12 385627 21.0 16.0 18.5 0.6 385627 chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L 11970492 exon Muc68E - chr3L 12163305 intron CG9760 - chr3L_12_11970001 chr3L_11970001 Sg4 1345 chr3L 11796563 11796601 chr3L 11796667 11796712 8 108 4.5 0.0 2.2 2.5 149 chr3L 11796563 exon Klp68D + chr3L 11796638 intron Klp68D + chr3L 11796712 intron Klp68D + chr3L_8_11795001 chr3L_11795001 Sg4 1346 chr3L 11837397 11837586 chr3L 11837582 11837678 6 114 0.0 0.0 0.0 6.0 281 chr3L 11837397 intergenic not near genes chr3L 11837538 intergenic not near genes chr3L 11837678 intergenic not near genes chr3L_6_11835001 chr3L_11835001 Sg4 1347 chr3L 11846395 11846413 chr3L 11846528 11846540 8 132 1.0 4.5 2.8 2.1 145 chr3L 11846395 intergenic not near genes chr3L 11846468 intergenic not near genes chr3L 11846540 intergenic not near genes chr3L_8_11845001 chr3L_11845001 Sg4 1348 chr3L 11847143 11847161 chr3L 11847258 11847276 5 115 5.5 0.0 2.8 1.3 133 chr3L 11847143 intergenic CG12521 - chr3L 11847210 intergenic CG12521 - chr3L 11847276 intergenic CG12521 - chr3L_5_11845001 chr3L_11845001 Sg4 1349 chr3L 11849307 11849356 chr3L 11849432 11849480 12 124 4.0 3.0 3.5 2.7 173 chr3L 11849307 intergenic not near genes chr3L 11849394 intergenic not near genes chr3L 11849480 intergenic not near genes chr3L_12_11845001 chr3L_11845001 Sg4 1350 chr3L 11858807 11858823 chr3L 11858910 11858926 8 103 4.5 3.0 3.8 1.7 119 chr3L 11858807 intron CG44837 - chr3L 11858866 intron CG44837 - chr3L 11858926 intron CG44837 - chr3L_8_11855001 chr3L_11855001 Sg4 1351 chr3L 11864539 11864571 chr3L 11865848 11865891 pogo 15 1318 10.0 5.0 7.5 1.8 1352 chr3L 11864539 intron CG44837 - chr3L 11865215 intron CG44837 - chr3L 11865891 intron CG44837 - chr3L_15_11865001 chr3L_11865001 Sg4 1352 chr3L 11929043 11929094 chr3L 11929174 11929224 13 131 2.5 3.5 3.0 3.2 181 chr3L 11929043 intron,intron CG44837 -,byn + chr3L 11929134 intron,intron CG44837 -,byn + chr3L 11929224 intron,intron CG44837 -,byn + chr3L_13_11925001 chr3L_11925001 Sg4 1353 chr3L 11931369 11931382 chr3L 11931477 11931488 4 106 9.0 8.0 8.5 0.4 119 chr3L 11931369 intron,intron CG44837 -,byn + chr3L 11931428 intron,intron CG44837 -,byn + chr3L 11931488 intron,intron CG44837 -,byn + chr3L_4_11930001 chr3L_11930001 Sg4 1354 chr3L 11931383 11931388 chr3L 11931476 11931486 6 99 6.0 8.0 7.0 0.8 103 chr3L 11931383 intron,intron CG44837 -,byn + chr3L 11931434 intron,intron CG44837 -,byn + chr3L 11931486 intron,intron CG44837 -,byn + chr3L_6_11930001 chr3L_11930001 Sg4 1355 chr3L 11943469 11943521 chr3L 11943595 11943647 11 126 0.5 5.0 2.8 2.9 178 chr3L 11943469 3` UTR Rpt4R + chr3L 11943558 intergenic Rpt4R +,CG5883 - chr3L 11943647 3` UTR CG5883 - chr3L_11_11940001 chr3L_11940001 Sg4 1356 chr3L 11984541 11984598 chr3L 11984657 11984722 15 119 6.5 1.5 4.0 3.0 181 chr3L 11984541 intergenic CG6938 + chr3L 11984632 intergenic CG6938 + chr3L 11984722 intergenic CG6938 + chr3L_15_11980001 chr3L_11980001 Sg4 1357 chr3L 12066344 12066400 chr3L 12066606 12066662 28 262 7.0 4.0 5.5 4.3 318 chr3L 12066344 intergenic not near genes chr3L 12066503 intergenic not near genes chr3L 12066662 intergenic not near genes chr3L_28_12065001 chr3L_12065001 Sg4 1358 chr3L 12075412 12075453 chr3L 12075526 12075562 4 112 1.5 0.0 0.8 2.2 150 chr3L 12075412 intron Sema-5c - chr3L 12075487 intron Sema-5c - chr3L 12075562 intron Sema-5c - chr3L_4_12075001 chr3L_12075001 Sg4 1359 chr3L 12092387 12092402 chr3L 12092489 12092504 4 102 1.5 4.0 2.8 1.1 117 chr3L 12092387 intergenic not near genes chr3L 12092446 intergenic not near genes chr3L 12092504 intergenic not near genes chr3L_4_12090001 chr3L_12090001 Sg4 1360 chr3L 12186342 12186400 chr3L 12186461 12186536 4 129 2.0 0.0 1.0 2.0 194 chr3L 12186342 intron CG6910 + chr3L 12186439 intron CG6910 + chr3L 12186536 exon CG6910 + chr3L_4_12185001 chr3L_12185001 Sg4 1361 chr3L 12304074 12304118 chr3L 12304167 12304219 13 99 7.0 4.5 5.8 1.9 145 chr3L 12304074 intergenic not near genes chr3L 12304146 intergenic not near genes chr3L 12304219 intergenic not near genes chr3L_13_12300001 chr3L_12300001 Sg4 1362 chr3L 12352108 12352154 chr3L 12352234 12352278 19 122 2.5 7.0 4.8 3.3 170 chr3L 12352108 intergenic not near genes chr3L 12352193 intergenic not near genes chr3L 12352278 intergenic not near genes chr3L_19_12350001 chr3L_12350001 Sg4 1363 chr3L 12356445 12356501 chr3L 12356621 12356678 13 175 3.5 4.0 3.8 2.7 233 chr3L 12356445 intergenic not near genes chr3L 12356562 intergenic not near genes chr3L 12356678 intergenic not near genes chr3L_13_12355001 chr3L_12355001 Sg4 1364 chr3L 12364250 12364269 chr3L 12366806 12366825 7 2556 2.0 0.5 1.2 3.2 2575 chr3L 12364250 intergenic not near genes chr3L 12365538 intergenic not near genes chr3L 12366825 intergenic not near genes chr3L_7_12365001 chr3L_12365001 Sg4 1365 chr3L 12369510 12369567 chr3L 12369625 12369682 12 115 0.5 1.0 0.8 6.7 172 chr3L 12369510 intron Ncc69 - chr3L 12369596 intron Ncc69 - chr3L 12369682 intron Ncc69 - chr3L_12_12365001 chr3L_12365001 Sg4 1366 chr3L 12479503 12479523 chr3L 12479597 12479627 11 103 2.0 6.0 4.0 2.2 124 chr3L 12479503 intron CG10663 - chr3L 12479565 intron CG10663 - chr3L 12479627 intron CG10663 - chr3L_11_12475001 chr3L_12475001 Sg4 1367 chr3L 12491704 12491709 chr3L 12491787 12491817 5 97 0.0 4.0 2.0 1.7 113 chr3L 12491704 intergenic CG10657 -,CR45682 + chr3L 12491760 intergenic CG10657 -,CR45682 + chr3L 12491817 intergenic CG10657 -,CR45682 + chr3L_5_12490001 chr3L_12490001 Sg4 1368 chr3L 12565388 12565436 chr3L 12565493 12565541 10 104 1.5 2.5 2.0 3.3 153 chr3L 12565388 intron sowah - chr3L 12565464 intron sowah - chr3L 12565541 intron sowah - chr3L_10_12565001 chr3L_12565001 Sg4 1369 chr3L 12576038 12576081 chr3L 12576590 12576633 5 552 10.0 8.5 9.2 0.5 595 chr3L 12576038 intergenic not near genes chr3L 12576336 intergenic not near genes chr3L 12576633 intergenic not near genes chr3L_5_12575001 chr3L_12575001 Sg4 1370 chr3L 12610996 12611027 chr3L 12611267 12611298 7 271 0.0 6.0 3.0 1.8 302 chr3L 12610996 intron caup + chr3L 12611147 intron caup + chr3L 12611298 intron caup + chr3L_7_12610001 chr3L_12610001 Sg4 1371 chr3L 12626127 12626155 chr3L 12626261 12626289 6 134 2.0 1.5 1.8 2.1 162 chr3L 12626127 intergenic not near genes chr3L 12626208 intergenic not near genes chr3L 12626289 intergenic not near genes chr3L_6_12625001 chr3L_12625001 Sg4 1372 chr3L 12647934 12647953 chr3L 12648035 12648054 7 101 6.0 3.0 4.5 1.3 120 chr3L 12647934 5` UTR CR32111 + chr3L 12647994 5` UTR CR32111 + chr3L 12648054 5` UTR CR32111 + chr3L_7_12645001 chr3L_12645001 Sg4 1373 chr3L 12706623 12706652 chr3L 12706775 12706804 12 152 3.5 2.0 2.8 3.2 181 chr3L 12706623 intron mirr + chr3L 12706714 intron mirr + chr3L 12706804 intron mirr + chr3L_12_12705001 chr3L_12705001 Sg4 1374 chr3L 12803575 12803599 chr3L 12803695 12803719 7 120 5.5 2.0 3.8 1.5 144 chr3L 12803575 intron Atg1 - chr3L 12803647 intron Atg1 - chr3L 12803719 intron Atg1 - chr3L_7_12800001 chr3L_12800001 Sg4 1375 chr3L 12827920 12827936 chr3L 12828030 12828046 7 109 2.5 0.0 1.2 3.2 126 chr3L 12827920 intron CG10960 - chr3L 12827983 intron CG10960 - chr3L 12828046 intron CG10960 - chr3L_7_12825001 chr3L_12825001 Sg4 1376 chr3L 12857974 12858002 chr3L 12858094 12858122 6 120 2.5 0.5 1.5 2.4 148 chr3L 12857974 3` UTR CG32107 - chr3L 12858048 3` UTR CG32107 - chr3L 12858122 3` UTR CG32107 - chr3L_6_12855001 chr3L_12855001 Sg4 1377 chr3L 12874900 12874954 chr3L 12877217 12877271 jockey 11 2317 3.0 2.5 2.8 2.9 2371 chr3L 12874900 intergenic not near genes chr3L 12876086 intergenic not near genes chr3L 12877271 intergenic not near genes chr3L_11_12875001 chr3L_12875001 Sg4 1378 chr3L 12894782 12894810 chr3L 12894884 12894913 12 103 2.5 8.0 5.2 1.9 131 chr3L 12894782 intergenic CG14118 + chr3L 12894848 intergenic CG14118 + chr3L 12894913 intergenic CG14118 + chr3L_12_12890001 chr3L_12890001 Sg4 1379 chr3L 12910218 12910274 chr3L 12910380 12910436 16 162 1.5 6.5 4.0 3.2 218 chr3L 12910218 intergenic not near genes chr3L 12910327 intergenic not near genes chr3L 12910436 intergenic not near genes chr3L_16_12910001 chr3L_12910001 Sg4 1380 chr3L 12919269 12919300 chr3L 12924749 12924762 Rt1c 7 5486 5.5 3.0 4.2 1.3 5493 chr3L 12919269 intergenic not near genes chr3L 12922016 intergenic not near genes chr3L 12924762 intergenic not near genes chr3L_7_12920001 chr3L_12920001 Sg4 1381 chr3L 12929706 12929744 chr3L 12930047 12930085 12 341 0.0 5.5 2.8 3.2 379 chr3L 12929706 intergenic not near genes chr3L 12929896 intergenic not near genes chr3L 12930085 intergenic not near genes chr3L_12_12925001 chr3L_12925001 Sg4 1382 chr3L 12955109 12955159 chr3L 12955210 12955260 13 100 3.5 3.5 3.5 2.9 151 chr3L 12955109 intergenic CG10752 - chr3L 12955184 intergenic not near genes chr3L 12955260 intergenic not near genes chr3L_13_12955001 chr3L_12955001 Sg4 1383 chr3L 12957764 12957810 chr3L 12962271 12962317 copia 8 4506 5.5 6.5 6.0 1.1 4553 chr3L 12957764 intergenic not near genes chr3L 12960040 intergenic not near genes chr3L 12962317 intergenic not near genes chr3L_8_12960001 chr3L_12960001 Sg4 1384 chr3L 12985180 12985220 chr3L 12985287 12985327 5 105 3.5 4.5 4.0 1.0 147 chr3L 12985180 intergenic not near genes chr3L 12985254 intergenic not near genes chr3L 12985327 intergenic not near genes chr3L_5_12985001 chr3L_12985001 Sg4 1385 chr3L 13085447 13085499 chr3L 13085572 13085624 18 125 3.0 2.5 2.8 4.7 177 chr3L 13085447 intergenic not near genes chr3L 13085536 intergenic not near genes chr3L 13085624 intergenic not near genes chr3L_18_13085001 chr3L_13085001 Sg4 1386 chr3L 13090709 13090755 chr3L 13091181 13091223 6 467 0.0 5.5 2.8 1.6 514 chr3L 13090709 intergenic not near genes chr3L 13090966 intergenic not near genes chr3L 13091223 intergenic not near genes chr3L_6_13090001 chr3L_13090001 Sg4 1387 chr3L 13122492 13122545 chr3L 13122593 13122646 8 101 3.5 8.0 5.8 1.2 154 chr3L 13122492 intergenic not near genes chr3L 13122569 intergenic not near genes chr3L 13122646 intergenic not near genes chr3L_8_13120001 chr3L_13120001 Sg4 1388 chr3L 13159269 13159296 chr3L 13159373 13159400 4 104 2.5 4.5 3.5 0.9 131 chr3L 13159269 intergenic not near genes chr3L 13159334 intergenic not near genes chr3L 13159400 intergenic not near genes chr3L_4_13155001 chr3L_13155001 Sg4 1389 chr3L 13159739 13159787 chr3L 13160025 13160076 15 287 4.0 3.0 3.5 3.3 337 chr3L 13159739 intergenic not near genes chr3L 13159908 intergenic not near genes chr3L 13160076 intergenic not near genes chr3L_15_13155001 chr3L_13155001 Sg4 1390 chr3L 13223415 13223424 chr3L 13223525 13223534 4 112 4.0 0.0 2.0 1.3 119 chr3L 13223415 intergenic not near genes chr3L 13223474 intergenic not near genes chr3L 13223534 intergenic not near genes chr3L_4_13220001 chr3L_13220001 Sg4 1391 chr3L 13261790 13261834 chr3L 13261905 13261949 10 115 3.5 3.5 3.5 2.2 159 chr3L 13261790 intron caps + chr3L 13261870 intron caps + chr3L 13261949 intron caps + chr3L_10_13260001 chr3L_13260001 Sg4 1392 chr3L 13267260 13267317 chr3L 13267398 13267455 13 135 3.5 5.0 4.2 2.5 195 chr3L 13267260 intron caps + chr3L 13267358 intron caps + chr3L 13267455 intron caps + chr3L_13_13265001 chr3L_13265001 Sg4 1393 chr3L 13375888 13375912 chr3L 13375993 13376017 6 105 4.5 4.0 4.2 1.2 129 chr3L 13375888 intergenic not near genes chr3L 13375952 intergenic not near genes chr3L 13376017 intergenic not near genes chr3L_6_13375001 chr3L_13375001 Sg4 1394 chr3L 13382491 13382526 chr3L 13382620 13382630 5 124 7.5 1.5 4.5 0.9 139 chr3L 13382491 intergenic ImpL1 + chr3L 13382560 intergenic ImpL1 + chr3L 13382630 intergenic ImpL1 + chr3L_5_13380001 chr3L_13380001 Sg4 1395 chr3L 13382528 13382540 chr3L 13382619 13382669 14 109 5.0 1.5 3.2 3.3 141 chr3L 13382528 intergenic ImpL1 + chr3L 13382598 intergenic ImpL1 + chr3L 13382669 intergenic ImpL1 + chr3L_14_13380001 chr3L_13380001 Sg4 1396 chr3L 13441354 13441403 chr3L 13443523 13443572 4 2169 4.0 17.5 10.8 0.3 2218 chr3L 13441354 intron CG14109 + chr3L 13442463 intergenic CG14109 +,CG10732 + chr3L 13443572 intron CG10732 + chr3L_4_13440001 chr3L_13440001 Sg4 1397 chr3L 13477002 13477035 chr3L 13477104 13477137 6 101 0.0 3.5 1.8 2.1 135 chr3L 13477002 intergenic not near genes chr3L 13477070 intergenic stv + chr3L 13477137 intergenic stv + chr3L_6_13475001 chr3L_13475001 Sg4 1398 chr3L 13525137 13525186 chr3L 13532958 13533007 roo 20 7820 3.0 6.0 4.5 3.6 7870 chr3L 13525137 intergenic not near genes chr3L 13529072 intergenic not near genes chr3L 13533007 intergenic not near genes chr3L_20_13525001 chr3L_13525001 Sg4 1399 chr3L 13629504 13629542 chr3L 13629640 13629678 16 136 4.5 5.5 5.0 2.7 174 chr3L 13629504 intron bru-3 - chr3L 13629591 intron bru-3 - chr3L 13629678 intron bru-3 - chr3L_16_13625001 chr3L_13625001 Sg4 1400 chr3L 13677507 13677562 chr3L 13677609 13677664 11 102 2.0 1.0 1.5 4.4 157 chr3L 13677507 intron bru-3 - chr3L 13677586 intron bru-3 - chr3L 13677664 intron bru-3 - chr3L_11_13675001 chr3L_13675001 Sg4 1401 chr3L 13740010 13740052 chr3L 13740126 13740169 6 116 2.0 4.5 3.2 1.4 159 chr3L 13740010 intron bru-3 - chr3L 13740090 intron bru-3 - chr3L 13740169 intron bru-3 - chr3L_6_13740001 chr3L_13740001 Sg4 1402 chr3L 13752765 13752805 chr3L 13752877 13752925 10 115 4.0 5.0 4.5 1.8 160 chr3L 13752765 intron bru-3 - chr3L 13752845 intron bru-3 - chr3L 13752925 intron bru-3 - chr3L_10_13750001 chr3L_13750001 Sg4 1403 chr3L 13778295 13778340 chr3L 13778452 13778495 6 156 3.0 4.0 3.5 1.3 200 chr3L 13778295 5` UTR bru-3 - chr3L 13778395 intron bru-3 - chr3L 13778495 intron bru-3 - chr3L_6_13775001 chr3L_13775001 Sg4 1404 chr3L 13800038 13800061 chr3L 13800365 13800388 6 327 4.0 1.0 2.5 1.7 350 chr3L 13800038 intron bru-3 - chr3L 13800213 intron bru-3 - chr3L 13800388 intron bru-3 - chr3L_6_13800001 chr3L_13800001 Sg4 1405 chr3L 13804526 13804549 chr3L 13822837 13822860 roo 5 18311 5.0 3.0 4.0 1.0 18334 chr3L 13804526 intergenic not near genes chr3L 13813693 intergenic not near genes chr3L 13822860 intergenic not near genes chr3L_5_13810001 chr3L_13810001 Sg4 1406 chr3L 13828672 13828711 chr3L 13828773 13828812 11 101 3.5 3.5 3.5 2.4 140 chr3L 13828672 intergenic not near genes chr3L 13828742 intergenic not near genes chr3L 13828812 intergenic not near genes chr3L_11_13825001 chr3L_13825001 Sg4 1407 chr3L 13833994 13834007 chr3L 13834091 13834146 4 128 5.0 5.0 5.0 0.7 152 chr3L 13833994 intergenic not near genes chr3L 13834070 intergenic not near genes chr3L 13834146 intergenic not near genes chr3L_4_13830001 chr3L_13830001 Sg4 1408 chr3L 13884360 13884382 chr3L 13884476 13884498 8 116 7.0 3.0 5.0 1.3 138 chr3L 13884360 intron dysc - chr3L 13884429 intron dysc - chr3L 13884498 intron dysc - chr3L_8_13880001 chr3L_13880001 Sg4 1409 chr3L 13901551 13901600 chr3L 13901648 13901699 20 100 5.0 6.0 5.5 3.1 148 chr3L 13901551 intron dysc - chr3L 13901625 intron dysc - chr3L 13901699 5` UTR dysc - chr3L_20_13900001 chr3L_13900001 Sg4 1410 chr3L 13920401 13920424 chr3L 13920505 13920529 8 105 3.5 2.0 2.8 2.1 128 chr3L 13920401 intron Rgl - chr3L 13920465 intron Rgl - chr3L 13920529 intron Rgl - chr3L_8_13920001 chr3L_13920001 Sg4 1411 chr3L 13931310 13931369 chr3L 13931440 13931499 6 130 2.5 0.0 1.2 2.7 189 chr3L 13931310 intron Gl + chr3L 13931404 intron Gl + chr3L 13931499 intron Gl + chr3L_6_13930001 chr3L_13930001 Sg4 1412 chr3L 13994445 13994463 chr3L 13994553 13994571 5 108 6.5 3.0 4.8 0.9 126 chr3L 13994445 intron 26-29-p + chr3L 13994508 intron 26-29-p + chr3L 13994571 intron 26-29-p + chr3L_5_13990001 chr3L_13990001 Sg4 1413 chr3L 14036653 14036699 chr3L 14036771 14036817 12 118 4.0 3.0 3.5 2.7 164 chr3L 14036653 3` UTR,exon pncr014:3L -,CG6661 + chr3L 14036735 3` UTR,3` UTR pncr014:3L -,CG6661 + chr3L 14036817 3` UTR pncr014:3L - chr3L_12_14035001 chr3L_14035001 Sg4 1414 chr3L 14219113 14219155 chr3L 14219337 14219384 13 227 2.0 2.5 2.2 4.1 271 chr3L 14219113 intron nuf + chr3L 14219248 intron nuf + chr3L 14219384 intron nuf + chr3L_13_14215001 chr3L_14215001 Sg4 1415 chr3L 14222760 14222798 chr3L 14222866 14222904 12 104 2.0 2.5 2.2 3.8 144 chr3L 14222760 intron nuf + chr3L 14222832 intron nuf + chr3L 14222904 intron nuf + chr3L_12_14220001 chr3L_14220001 Sg4 1416 chr3L 14229844 14229882 chr3L 14230025 14230063 14 177 5.5 6.0 5.8 2.1 219 chr3L 14229844 intron nuf + chr3L 14229954 intron nuf + chr3L 14230063 intron nuf + chr3L_14_14225001 chr3L_14225001 Sg4 1417 chr3L 14236027 14236056 chr3L 14236189 14236218 7 162 6.0 1.0 3.5 1.6 191 chr3L 14236027 intergenic CG34244 - chr3L 14236122 intergenic CG34244 - chr3L 14236218 intergenic CG34244 -,CG7906 + chr3L_7_14235001 chr3L_14235001 Sg4 1418 chr3L 14245554 14245587 chr3L 14245673 14245706 1360 8 119 6.5 2.5 4.5 1.5 152 chr3L 14245554 3` UTR CR44561 - chr3L 14245630 3` UTR CR44561 - chr3L 14245706 intergenic CR44561 -,CR44560 + chr3L_8_14245001 chr3L_14245001 Sg4 1419 chr3L 14267357 14267393 chr3L 14271822 14271822 F-element 4 4456 3.0 3.5 3.2 1.0 4465 chr3L 14267357 intergenic not near genes chr3L 14269590 intergenic not near genes chr3L 14271822 intergenic not near genes chr3L_4_14265001 chr3L_14265001 Sg4 1420 chr3L 14277392 14277436 chr3L 14278034 14278083 8 646 3.0 2.0 2.5 2.3 691 chr3L 14277392 intron fz + chr3L 14277738 intron fz + chr3L 14278083 intron fz + chr3L_8_14275001 chr3L_14275001 Sg4 1421 chr3L 14282561 14282603 chr3L 14282666 14282708 12 105 6.0 8.0 7.0 1.5 147 chr3L 14282561 intron fz + chr3L 14282634 intron fz + chr3L 14282708 intron fz + chr3L_12_14280001 chr3L_14280001 Sg4 1422 chr3L 14295962 14296011 chr3L 14296473 14296522 roo 13 510 5.5 10.0 7.8 1.5 560 chr3L 14295962 intron fz + chr3L 14296242 intron fz + chr3L 14296522 intron fz + chr3L_13_14295001 chr3L_14295001 Sg4 1423 chr3L 14312011 14312055 chr3L 14316836 14316848 X-element 14 4826 2.5 4.0 3.2 3.3 4837 chr3L 14312011 exon fz + chr3L 14314430 intron fz + chr3L 14316848 intron fz + chr3L_14_14310001 chr3L_14310001 Sg4 1424 chr3L 14320024 14320074 chr3L 14320211 14320260 9 186 0.5 4.5 2.5 2.6 236 chr3L 14320024 intron fz + chr3L 14320142 intron fz + chr3L 14320260 intron fz + chr3L_9_14320001 chr3L_14320001 Sg4 1425 chr3L 14356500 14356542 chr3L 14356605 14356647 8 105 3.0 2.0 2.5 2.3 147 chr3L 14356500 intron fz + chr3L 14356574 intron fz + chr3L 14356647 intron fz + chr3L_8_14355001 chr3L_14355001 Sg4 1426 chr3L 14441582 14441626 chr3L 14441756 14441800 7 172 1.5 2.0 1.8 2.5 218 chr3L 14441582 intron bbg - chr3L 14441691 intron bbg - chr3L 14441800 intron bbg - chr3L_7_14440001 chr3L_14440001 Sg4 1427 chr3L 14444696 14444739 chr3L 14444895 14444934 8 199 2.5 4.5 3.5 1.8 238 chr3L 14444696 intron bbg - chr3L 14444815 intron bbg - chr3L 14444934 intron bbg - chr3L_8_14440001 chr3L_14440001 Sg4 1428 chr3L 14467104 14467152 chr3L 14467213 14467265 15 111 4.0 3.5 3.8 3.1 161 chr3L 14467104 intron bbg - chr3L 14467184 intron bbg - chr3L 14467265 intron bbg - chr3L_15_14465001 chr3L_14465001 Sg4 1429 chr3L 14468435 14468475 chr3L 14473666 14473706 copia 11 5230 4.5 5.5 5.0 1.8 5271 chr3L 14468435 intron bbg - chr3L 14471070 intron bbg - chr3L 14473706 intron bbg - chr3L_11_14470001 chr3L_14470001 Sg4 1430 chr3L 14486000 14486047 chr3L 14486101 14486153 8 105 2.5 5.0 3.8 1.7 153 chr3L 14486000 intron bbg - chr3L 14486076 intron bbg - chr3L 14486153 intron bbg - chr3L_8_14485001 chr3L_14485001 Sg4 1431 chr3L 14522077 14522126 chr3L 14522201 14522245 14 123 1.0 1.5 1.2 6.4 168 chr3L 14522077 intron bbg - chr3L 14522161 intron bbg - chr3L 14522245 intron bbg - chr3L_14_14520001 chr3L_14520001 Sg4 1432 chr3L 14546804 14546807 chr3L 14546930 14546933 4 126 0.0 7.0 3.5 0.9 129 chr3L 14546804 intron CG9238 - chr3L 14546868 intron CG9238 - chr3L 14546933 intron CG9238 - chr3L_4_14545001 chr3L_14545001 Sg4 1433 chr3L 14641281 14641337 chr3L 14641444 14641500 11 163 0.5 0.0 0.2 9.2 219 chr3L 14641281 intron dlp + chr3L 14641390 intron dlp + chr3L 14641500 intron dlp + chr3L_11_14640001 chr3L_14640001 Sg4 1434 chr3L 14653884 14653941 chr3L 14654046 14654103 16 158 2.5 0.5 1.5 6.4 219 chr3L 14653884 intron dlp + chr3L 14653994 intron dlp + chr3L 14654103 intron dlp + chr3L_16_14650001 chr3L_14650001 Sg4 1435 chr3L 14721164 14721206 chr3L 14723032 14723074 Rt1c 22 1867 4.5 4.0 4.2 4.2 1910 chr3L 14721164 intron ome + chr3L 14722119 intron ome + chr3L 14723074 intron ome + chr3L_22_14720001 chr3L_14720001 Sg4 1436 chr3L 14741121 14741165 chr3L 14741224 14741268 11 103 4.0 3.0 3.5 2.4 147 chr3L 14741121 intron ome + chr3L 14741194 intron ome + chr3L 14741268 intron ome + chr3L_11_14740001 chr3L_14740001 Sg4 1437 chr3L 14825138 14825152 chr3L 14832890 14832904 Stalker2 4 7752 0.5 9.0 4.8 0.7 7766 chr3L 14825138 intron CG17839 + chr3L 14829021 intron CG17839 + chr3L 14832904 intron CG17839 + chr3L_4_14825001 chr3L_14825001 Sg4 1438 chr3L 14876769 14876824 chr3L 14877523 14877576 23 753 4.5 4.5 4.5 4.2 807 chr3L 14876769 intron CG17839 + chr3L 14877172 intron CG17839 + chr3L 14877576 exon CG17839 + chr3L_23_14875001 chr3L_14875001 Sg4 1439 chr3L 14922080 14922133 chr3L 14922211 14922266 11 128 4.5 2.0 3.2 2.6 186 chr3L 14922080 intron DCX-EMAP + chr3L 14922173 intron DCX-EMAP + chr3L 14922266 intron DCX-EMAP + chr3L_11_14920001 chr3L_14920001 Sg4 1440 chr3L 15085025 15085081 chr3L 15086216 15086269 1360 12 1185 1.5 3.5 2.5 3.4 1244 chr3L 15085025 intron cp309 - chr3L 15085647 intron cp309 - chr3L 15086269 intron cp309 - chr3L_12_15085001 chr3L_15085001 Sg4 1441 chr3L 15099544 15099589 chr3L 15099870 15099915 11 326 1.0 1.5 1.2 5.0 371 chr3L 15099544 intron CTPsyn + chr3L 15099730 intron CTPsyn + chr3L 15099915 intron CTPsyn + chr3L_11_15095001 chr3L_15095001 Sg4 1442 chr3L 15136842 15136902 chr3L 15137231 15137249 20 386 3.5 2.5 3.0 5.0 407 chr3L 15136842 5` UTR CG12316 - chr3L 15137046 intergenic CG12316 - chr3L 15137249 intergenic CG12316 -,Pdi - chr3L_20_15135001 chr3L_15135001 Sg4 1443 chr3L 15209042 15209078 chr3L 15209153 15209181 8 110 3.5 0.0 1.8 2.9 139 chr3L 15209042 intergenic CG6888 + chr3L 15209112 intergenic not near genes chr3L 15209181 intergenic not near genes chr3L_8_15205001 chr3L_15205001 Sg4 1444 chr3L 15231374 15231417 chr3L 15231492 15231524 16 114 6.5 1.5 4.0 3.2 150 chr3L 15231374 intergenic not near genes chr3L 15231449 intergenic not near genes chr3L 15231524 intergenic not near genes chr3L_16_15230001 chr3L_15230001 Sg4 1445 chr3L 15233539 15233576 chr3L 15233645 15233682 6 106 0.5 2.0 1.2 2.7 143 chr3L 15233539 intergenic not near genes chr3L 15233610 intergenic not near genes chr3L 15233682 intergenic not near genes chr3L_6_15230001 chr3L_15230001 Sg4 1446 chr3L 15259445 15259474 chr3L 15259592 15259621 7 146 5.5 2.0 3.8 1.5 176 chr3L 15259445 intergenic not near genes chr3L 15259533 intergenic not near genes chr3L 15259621 intergenic not near genes chr3L_7_15255001 chr3L_15255001 Sg4 1447 chr3L 15264045 15264086 chr3L 15264146 15264156 6 96 0.0 0.5 0.2 5.0 111 chr3L 15264045 intergenic not near genes chr3L 15264100 intergenic not near genes chr3L 15264156 intergenic not near genes chr3L_6_15260001 chr3L_15260001 Sg4 1448 chr3L 15282695 15282743 chr3L 15282850 15282898 8 155 3.0 2.5 2.8 2.1 203 chr3L 15282695 intergenic not near genes chr3L 15282796 intergenic not near genes chr3L 15282898 intergenic not near genes chr3L_8_15280001 chr3L_15280001 Sg4 1449 chr3L 15284549 15284593 chr3L 15284653 15284696 7 102 6.5 5.0 5.8 1.0 147 chr3L 15284549 intergenic not near genes chr3L 15284622 intergenic not near genes chr3L 15284696 intergenic not near genes chr3L_7_15280001 chr3L_15280001 Sg4 1450 chr3L 15393649 15393689 chr3L 15393876 15393916 10 227 4.0 2.5 3.2 2.4 267 chr3L 15393649 intergenic not near genes chr3L 15393782 intergenic not near genes chr3L 15393916 intergenic not near genes chr3L_10_15390001 chr3L_15390001 Sg4 1451 chr3L 15423746 15423779 chr3L 15426615 15426648 opus 7 2869 1.5 2.5 2.0 2.3 2902 chr3L 15423746 intergenic not near genes chr3L 15425197 intergenic not near genes chr3L 15426648 intergenic not near genes chr3L_7_15425001 chr3L_15425001 Sg4 1452 chr3L 15431597 15431641 chr3L 15431786 15431835 11 192 1.0 4.0 2.5 3.1 238 chr3L 15431597 intergenic not near genes chr3L 15431716 intergenic not near genes chr3L 15431835 intergenic not near genes chr3L_11_15430001 chr3L_15430001 Sg4 1453 chr3L 15439043 15439080 chr3L 15440114 15440151 9 1070 2.0 5.5 3.8 1.9 1108 chr3L 15439043 intergenic not near genes chr3L 15439597 intergenic not near genes chr3L 15440151 intergenic not near genes chr3L_9_15435001 chr3L_15435001 Sg4 1454 chr3L 15444627 15444682 chr3L 15444746 15444801 15 118 4.0 8.5 6.2 2.1 174 chr3L 15444627 intergenic not near genes chr3L 15444714 intergenic not near genes chr3L 15444801 intergenic not near genes chr3L_15_15440001 chr3L_15440001 Sg4 1455 chr3L 15493290 15493346 chr3L 15493410 15493466 4 120 1.5 0.0 0.8 2.2 176 chr3L 15493290 exon CG12355 - chr3L 15493378 intron CG12355 - chr3L 15493466 intron CG12355 - chr3L_4_15490001 chr3L_15490001 Sg4 1456 chr3L 15511792 15511835 chr3L 15511958 15512001 7 166 3.0 3.5 3.2 1.7 209 chr3L 15511792 intron Eip71CD + chr3L 15511896 intron Eip71CD + chr3L 15512001 intron Eip71CD + chr3L_7_15510001 chr3L_15510001 Sg4 1457 chr3L 15600175 15600195 chr3L 15600301 15600320 5 126 3.0 1.0 2.0 1.7 145 chr3L 15600175 intron RhoGAP71E + chr3L 15600248 intron RhoGAP71E + chr3L 15600320 intron RhoGAP71E + chr3L_5_15600001 chr3L_15600001 Sg4 1458 chr3L 15643570 15643617 chr3L 15643882 15643929 11 311 3.5 4.0 3.8 2.3 359 chr3L 15643570 intron comm3 - chr3L 15643750 intron comm3 - chr3L 15643929 intron comm3 - chr3L_11_15640001 chr3L_15640001 Sg4 1459 chr3L 15691393 15691443 chr3L 15691500 15691550 9 95 0.0 3.0 1.5 3.6 157 chr3L 15691393 intron CG34451 - chr3L 15691472 intron CG34451 - chr3L 15691550 intron CG34451 - chr3L_9_15690001 chr3L_15690001 Sg4 1460 chr3L 15737371 15737396 chr3L 15737484 15737511 6 115 2.0 5.0 3.5 1.3 140 chr3L 15737371 intergenic not near genes chr3L 15737441 intergenic not near genes chr3L 15737511 intergenic not near genes chr3L_6_15735001 chr3L_15735001 Sg4 1461 chr3L 15809150 15809177 chr3L 15809259 15809286 6 109 2.5 3.5 3.0 1.5 136 chr3L 15809150 intergenic CG6244 +,CG13445 + chr3L 15809218 intergenic CG13445 +,CG6244 + chr3L 15809286 intergenic CG13445 +,CG6244 + chr3L_6_15805001 chr3L_15805001 Sg4 1462 chr3L 15832231 15832275 chr3L 15832337 15832381 8 106 3.5 3.0 3.2 1.9 150 chr3L 15832231 intergenic dbo +,CG12713 + chr3L 15832306 intergenic CG12713 +,dbo + chr3L 15832381 intergenic CG12713 +,dbo + chr3L_8_15830001 chr3L_15830001 Sg4 1463 chr3L 15840408 15840469 chr3L 15840521 15840579 9 112 3.0 2.0 2.5 2.6 171 chr3L 15840408 intron CG32150 - chr3L 15840494 intron CG32150 - chr3L 15840579 intron CG32150 - chr3L_9_15840001 chr3L_15840001 Sg4 1464 chr3L 15883179 15883212 chr3L 15883497 15883519 8 313 3.0 3.5 3.2 1.9 340 chr3L 15883179 intron pHCl - chr3L 15883349 intron pHCl - chr3L 15883519 intron pHCl - chr3L_8_15880001 chr3L_15880001 Sg4 1465 chr3L 15899203 15899259 chr3L 15899795 15899844 jockey 12 587 3.0 5.0 4.0 2.4 641 chr3L 15899203 intergenic pHCl - chr3L 15899524 intergenic pHCl - chr3L 15899844 intergenic sff - chr3L_12_15895001 chr3L_15895001 Sg4 1466 chr3L 15929173 15929223 chr3L 15938345 15938395 roo 15 9172 1.5 2.5 2.0 5.0 9222 chr3L 15929173 intron Pka-C3 - chr3L 15933784 intron Pka-C3 - chr3L 15938395 intron Pka-C3 - chr3L_15_15930001 chr3L_15930001 Sg4 1467 chr3L 15989212 15989225 chr3L 15989320 15989333 6 108 4.5 3.5 4.0 1.2 121 chr3L 15989212 intron Hip14 + chr3L 15989272 intron Hip14 + chr3L 15989333 intron Hip14 + chr3L_6_15985001 chr3L_15985001 Sg4 1468 chr3L 16051176 16051224 chr3L 16051566 16051614 13 390 1.5 1.0 1.2 5.9 438 chr3L 16051176 intergenic th - chr3L 16051395 intergenic th - chr3L 16051614 intergenic Mbs + chr3L_13_16050001 chr3L_16050001 Sg4 1469 chr3L 16162589 16162617 chr3L 16162686 16162726 10 108 4.0 3.5 3.8 2.1 137 chr3L 16162589 intron CG5151 - chr3L 16162658 intron CG5151 - chr3L 16162726 intron CG5151 - chr3L_10_16160001 chr3L_16160001 Sg4 1470 chr3L 16144222 16144272 chr3L 16175477 16175527 9 31256 18.0 25.0 21.5 0.4 31305 chr3L 16144222 intron CG5151 - chr3L 16159874 intron CG5151 - chr3L 16175527 intergenic not near genes chr3L_9_16155001 chr3L_16155001 Sg4 1471 chr3L 16182061 16182094 chr3L 16182186 16182239 10 143 0.0 3.5 1.8 3.6 178 chr3L 16182061 intergenic not near genes chr3L 16182150 intergenic not near genes chr3L 16182239 intergenic not near genes chr3L_10_16180001 chr3L_16180001 Sg4 1472 chr3L 16184087 16184130 chr3L 16188931 16188974 X-element 8 4844 2.5 3.5 3.0 2.0 4887 chr3L 16184087 intergenic not near genes chr3L 16186530 intergenic not near genes chr3L 16188974 intergenic not near genes chr3L_8_16185001 chr3L_16185001 Sg4 1473 chr3L 16293011 16293052 chr3L 16293271 16293312 10 252 6.5 3.5 5.0 1.7 301 chr3L 16293011 intergenic not near genes chr3L 16293162 intergenic not near genes chr3L 16293312 intergenic not near genes chr3L_10_16290001 chr3L_16290001 Sg4 1474 chr3L 16366750 16366762 chr3L 16366918 16366930 4 168 16.0 9.0 12.5 0.3 180 chr3L 16366750 exon Cpr72Ec - chr3L 16366840 exon Cpr72Ec - chr3L 16366930 exon Cpr72Ec - chr3L_4_16365001 chr3L_16365001 Sg4 1475 chr3L 16366767 16366796 chr3L 16366916 16366959 17 159 4.0 9.0 6.5 2.3 192 chr3L 16366767 exon Cpr72Ec - chr3L 16366863 exon Cpr72Ec - chr3L 16366959 exon Cpr72Ec - chr3L_17_16365001 chr3L_16365001 Sg4 1476 chr3L 16431804 16431858 chr3L 16431923 16431978 4 118 2.5 0.0 1.2 1.8 174 chr3L 16431804 intron,intron CG33158 +,dsx-c73A - chr3L 16431891 intron,intron CG33158 +,dsx-c73A - chr3L 16431978 intron,intron CG33158 +,dsx-c73A - chr3L_4_16430001 chr3L_16430001 Sg4 1477 chr3L 16443825 16443878 chr3L 16446190 16446232 Doc 15 2364 4.0 5.0 4.5 2.7 2407 chr3L 16443825 intron,intron CG33158 +,dsx-c73A - chr3L 16445028 intron,intron CG33158 +,dsx-c73A - chr3L 16446232 intron,intron CG33158 +,dsx-c73A - chr3L_15_16445001 chr3L_16445001 Sg4 1478 chr3L 16457503 16457552 chr3L 16457624 16457672 9 119 2.0 3.0 2.5 2.6 169 chr3L 16457503 intron CG33158 + chr3L 16457588 intron CG33158 + chr3L 16457672 intron CG33158 + chr3L_9_16455001 chr3L_16455001 Sg4 1479 chr3L 16474910 16474964 chr3L 16475218 16475272 12 308 2.0 4.5 3.2 2.9 362 chr3L 16474910 intron,intron CG33158 +,aos - chr3L 16475091 intron,intron CG33158 +,aos - chr3L 16475272 intron,intron CG33158 +,aos - chr3L_12_16475001 chr3L_16475001 Sg4 1480 chr3L 16487427 16487483 chr3L 16487529 16487584 9 100 5.0 3.5 4.2 1.7 157 chr3L 16487427 intron CG33158 + chr3L 16487506 intron CG33158 + chr3L 16487584 intron CG33158 + chr3L_9_16485001 chr3L_16485001 Sg4 1481 chr3L 16493951 16494007 chr3L 16494493 16494548 jockey 15 541 6.0 4.0 5.0 2.5 597 chr3L 16493951 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494250 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494548 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_15_16490001 chr3L_16490001 Sg4 1482 chr3L 16540031 16540084 chr3L 16540144 16540197 16 112 2.0 2.0 2.0 5.3 166 chr3L 16540031 intron CG43373 - chr3L 16540114 intron CG43373 - chr3L 16540197 intron CG43373 - chr3L_16_16540001 chr3L_16540001 Sg4 1483 chr3L 16563208 16563232 chr3L 16563314 16563337 7 105 5.5 0.0 2.8 1.8 129 chr3L 16563208 intergenic Mipp1 - chr3L 16563272 intergenic Mipp1 - chr3L 16563337 intergenic Mipp1 - chr3L_7_16560001 chr3L_16560001 Sg4 1484 chr3L 16610664 16610705 chr3L 16610774 16610815 10 110 3.0 6.5 4.8 1.7 151 chr3L 16610664 3` UTR Su(P) - chr3L 16610740 exon Su(P) - chr3L 16610815 exon Su(P) - chr3L_10_16610001 chr3L_16610001 Sg4 1485 chr3L 16616486 16616540 chr3L 16621839 16621893 297 8 5353 5.0 2.5 3.8 1.7 5407 chr3L 16616486 3` UTR Abl - chr3L 16619190 3` UTR Abl - chr3L 16621893 3` UTR Abl - chr3L_8_16615001 chr3L_16615001 Sg4 1486 chr3L 16683997 16684035 chr3L 16689243 16689281 copia 4 5246 2.0 3.5 2.8 1.1 5284 chr3L 16683997 intron,intron Lasp -,CG43954 - chr3L 16686639 intron,intron Lasp -,CG43954 - chr3L 16689281 intron,intron,5` UTR Lasp -,CG43954 -,CR45179 + chr3L_4_16685001 chr3L_16685001 Sg4 1487 chr3L 16728076 16728101 chr3L 16728186 16728219 4 116 4.0 0.0 2.0 1.3 143 chr3L 16728076 intergenic PGRP-SB1 -,Dbp73D - chr3L 16728148 intergenic PGRP-SB1 -,Dbp73D - chr3L 16728219 intergenic PGRP-SB1 -,Dbp73D - chr3L_4_16725001 chr3L_16725001 Sg4 1488 chr3L 16746840 16746854 chr3L 16746923 16746940 12 104 3.5 7.0 5.2 1.9 100 chr3L 16746840 intergenic not near genes chr3L 16746890 intergenic not near genes chr3L 16746940 intergenic not near genes chr3L_12_16745001 chr3L_16745001 Sg4 1489 chr3L 16786973 16786996 chr3L 16787074 16787074 6 96 0.5 5.5 3.0 1.5 101 chr3L 16786973 intergenic Int6 - chr3L 16787024 intergenic Int6 - chr3L 16787074 intergenic Int6 -,CG9674 - chr3L_6_16785001 chr3L_16785001 Sg4 1490 chr3L 16817857 16817897 chr3L 16818017 16818052 12 163 4.5 4.5 4.5 2.2 195 chr3L 16817857 intron,intron nudC +,CG13024 - chr3L 16817954 intron,intron nudC +,CG13024 - chr3L 16818052 intron,intron nudC +,CG13024 - chr3L_12_16815001 chr3L_16815001 Sg4 1491 chr3L 16830751 16830783 chr3L 16830859 16830891 5 105 5.0 1.5 3.2 1.2 140 chr3L 16830751 intergenic not near genes chr3L 16830821 intergenic not near genes chr3L 16830891 intergenic not near genes chr3L_5_16830001 chr3L_16830001 Sg4 1492 chr3L 16873319 16873343 chr3L 16873449 16873473 11 130 4.5 1.0 2.8 2.9 154 chr3L 16873319 intron Lmpt + chr3L 16873396 intron Lmpt + chr3L 16873473 intron Lmpt + chr3L_11_16870001 chr3L_16870001 Sg4 1493 chr3L 16945712 16945747 chr3L 16954889 16954896 roo 19 9174 10.0 6.0 8.0 2.1 9184 chr3L 16945712 exon Obp73a + chr3L 16950304 intergenic not near genes chr3L 16954896 5` UTR Nc73EF + chr3L_19_16950001 chr3L_16950001 Sg4 1494 chr3L 16966242 16966299 chr3L 16967659 16967716 10 1411 12.0 15.5 13.8 0.7 1474 chr3L 16966242 exon Nc73EF + chr3L 16966979 intron Nc73EF + chr3L 16967716 3` UTR Nc73EF + chr3L_10_16965001 chr3L_16965001 Sg4 1495 chr3L 17026764 17026811 chr3L 17026870 17026917 8 105 8.0 3.5 5.8 1.2 153 chr3L 17026764 exon Fit2 + chr3L 17026840 3` UTR Fit2 + chr3L 17026917 3` UTR Fit2 + chr3L_8_17025001 chr3L_17025001 Sg4 1496 chr3L 17027149 17027180 chr3L 17027266 17027297 8 116 2.0 2.5 2.2 2.5 148 chr3L 17027149 intergenic Fit2 +,CG7730 + chr3L 17027223 intergenic Fit2 +,CG7730 + chr3L 17027297 intergenic Fit2 +,CG7730 + chr3L_8_17025001 chr3L_17025001 Sg4 1497 chr3L 17034908 17034967 chr3L 17035121 17035175 G2 8 212 1.5 1.5 1.5 3.2 267 chr3L 17034908 intergenic not near genes chr3L 17035042 intergenic not near genes chr3L 17035175 intergenic beg + chr3L_8_17035001 chr3L_17035001 Sg4 1498 chr3L 17084986 17085026 chr3L 17094160 17094200 roo 12 9174 4.0 4.0 4.0 2.4 9214 chr3L 17084986 intron Rbp6 - chr3L 17089593 intron Rbp6 - chr3L 17094200 intron Rbp6 - chr3L_12_17085001 chr3L_17085001 Sg4 1499 chr3L 17120633 17120684 chr3L 17120733 17120785 13 101 1.5 4.5 3.0 3.2 152 chr3L 17120633 intron Rbp6 - chr3L 17120709 intron Rbp6 - chr3L 17120785 intron Rbp6 - chr3L_13_17120001 chr3L_17120001 Sg4 1500 chr3L 17122848 17122897 chr3L 17122982 17123031 11 133 3.0 4.0 3.5 2.4 183 chr3L 17122848 intron Rbp6 - chr3L 17122940 intron Rbp6 - chr3L 17123031 intron Rbp6 - chr3L_11_17120001 chr3L_17120001 Sg4 1501 chr3L 17149141 17149159 chr3L 17149247 17149265 7 106 8.5 0.0 4.2 1.3 124 chr3L 17149141 intron Rbp6 - chr3L 17149203 intron Rbp6 - chr3L 17149265 intron Rbp6 - chr3L_7_17145001 chr3L_17145001 Sg4 1502 chr3L 17190972 17191018 chr3L 17191079 17191114 8 100 1.5 4.0 2.8 2.1 142 chr3L 17190972 intron Rbp6 - chr3L 17191043 intron Rbp6 - chr3L 17191114 intron Rbp6 - chr3L_8_17190001 chr3L_17190001 Sg4 1503 chr3L 17214277 17214297 chr3L 17214382 17214401 5 105 7.0 10.0 8.5 0.5 124 chr3L 17214277 intron Rbp6 - chr3L 17214339 intron Rbp6 - chr3L 17214401 intron Rbp6 - chr3L_5_17210001 chr3L_17210001 Sg4 1504 chr3L 17237358 17237412 chr3L 17237535 17237589 4 177 3.0 2.0 2.5 1.1 231 chr3L 17237358 intron Rbp6 - chr3L 17237474 intron Rbp6 - chr3L 17237589 intron Rbp6 - chr3L_4_17235001 chr3L_17235001 Sg4 1505 chr3L 17264972 17265014 chr3L 17265082 17265124 15 110 1.5 2.0 1.8 5.4 152 chr3L 17264972 3` UTR CG13723 + chr3L 17265048 intergenic CG13723 + chr3L 17265124 intergenic CG13723 + chr3L_15_17265001 chr3L_17265001 Sg4 1506 chr3L 17272230 17272264 chr3L 17272376 17272422 6 156 3.0 3.5 3.2 1.4 192 chr3L 17272230 intergenic not near genes chr3L 17272326 intergenic not near genes chr3L 17272422 intergenic not near genes chr3L_6_17270001 chr3L_17270001 Sg4 1507 chr3L 17284227 17284282 chr3L 17284418 17284473 13 191 8.5 7.5 8.0 1.4 246 chr3L 17284227 intergenic not near genes chr3L 17284350 intergenic not near genes chr3L 17284473 intergenic not near genes chr3L_13_17280001 chr3L_17280001 Sg4 1508 chr3L 17281150 17281186 chr3L 17285544 17285580 9 4395 15.5 23.5 19.5 0.4 4430 chr3L 17281150 intergenic not near genes chr3L 17283365 intergenic not near genes chr3L 17285580 intergenic not near genes chr3L_9_17280001 chr3L_17280001 Sg4 1509 chr3L 17331045 17331080 chr3L 17331160 17331195 5 115 3.5 0.5 2.0 1.7 150 chr3L 17331045 intergenic not near genes chr3L 17331120 intergenic not near genes chr3L 17331195 intergenic not near genes chr3L_5_17330001 chr3L_17330001 Sg4 1510 chr3L 17408898 17408910 chr3L 17408999 17409011 4 101 5.5 6.5 6.0 0.6 113 chr3L 17408898 intron blot - chr3L 17408954 intron blot - chr3L 17409011 intron blot - chr3L_4_17405001 chr3L_17405001 Sg4 1511 chr3L 17492482 17492491 chr3L 17492811 17492825 5 333 3.5 4.5 4.0 1.0 343 chr3L 17492482 intron Oatp74D + chr3L 17492654 intron Oatp74D + chr3L 17492825 intron Oatp74D + chr3L_5_17490001 chr3L_17490001 Sg4 1512 chr3L 17516960 17517003 chr3L 17524543 17524586 412 11 7583 1.5 5.5 3.5 2.4 7626 chr3L 17516960 intron CG7564 + chr3L 17520773 intron CG7564 + chr3L 17524586 3` UTR CG7564 + chr3L_11_17520001 chr3L_17520001 Sg4 1513 chr3L 17585329 17585342 chr3L 17585633 17585643 4 302 15.5 21.5 18.5 0.2 314 chr3L 17585329 intron Eip74EF - chr3L 17585486 intron Eip74EF - chr3L 17585643 intron Eip74EF - chr3L_4_17585001 chr3L_17585001 Sg4 1514 chr3L 17589745 17589781 chr3L 17589848 17589884 10 103 4.5 5.0 4.8 1.7 139 chr3L 17589745 intron Eip74EF - chr3L 17589814 intron Eip74EF - chr3L 17589884 intron Eip74EF - chr3L_10_17585001 chr3L_17585001 Sg4 1515 chr3L 17665619 17665635 chr3L 17665727 17665743 5 107 11.0 2.0 6.5 0.7 124 chr3L 17665619 intron Crtc - chr3L 17665681 intron Crtc - chr3L 17665743 intron Crtc - chr3L_5_17665001 chr3L_17665001 Sg4 1516 chr3L 17665651 17665673 chr3L 17665726 17665781 7 100 3.0 2.0 2.5 2.0 130 chr3L 17665651 intron Crtc - chr3L 17665716 intron Crtc - chr3L 17665781 intron Crtc - chr3L_7_17665001 chr3L_17665001 Sg4 1517 chr3L 17730830 17730862 chr3L 17738185 17738217 mdg1 5 7355 2.5 2.0 2.2 1.6 7387 chr3L 17730830 intron Ccn + chr3L 17734524 intron Ccn + chr3L 17738217 intron Ccn + chr3L_5_17730001 chr3L_17730001 Sg4 1518 chr3L 17763449 17763473 chr3L 17763612 17763636 4 162 5.5 6.0 5.8 0.6 187 chr3L 17763449 intron,intron Adgf-A -,Msi - chr3L 17763542 intron,intron Adgf-A -,Msi - chr3L 17763636 intron,intron Adgf-A -,Msi - chr3L_4_17760001 chr3L_17760001 Sg4 1519 chr3L 17765803 17765842 chr3L 17765910 17765949 10 106 3.5 0.0 1.8 3.6 146 chr3L 17765803 intergenic not near genes chr3L 17765876 intergenic not near genes chr3L 17765949 intergenic not near genes chr3L_10_17765001 chr3L_17765001 Sg4 1520 chr3L 17790597 17790631 chr3L 17790887 17790921 9 290 1.0 4.5 2.8 2.4 324 chr3L 17790597 intergenic CG42815 - chr3L 17790759 intergenic CG42815 - chr3L 17790921 intergenic CG42815 - chr3L_9_17790001 chr3L_17790001 Sg4 1521 chr3L 17791623 17791674 chr3L 17791738 17791789 20 114 4.5 2.0 3.2 4.8 166 chr3L 17791623 intergenic CG42815 -,CG42816 - chr3L 17791706 intergenic CG42815 -,CG42816 - chr3L 17791789 intergenic CG42816 -,CG42815 - chr3L_20_17790001 chr3L_17790001 Sg4 1522 chr3L 17799793 17799830 chr3L 17801605 17801642 S-element 5 1810 4.0 1.5 2.8 1.3 1849 chr3L 17799793 intron NUCB1 - chr3L 17800718 intron NUCB1 - chr3L 17801642 intron NUCB1 - chr3L_5_17800001 chr3L_17800001 Sg4 1523 chr3L 17834304 17834350 chr3L 17834493 17834539 11 189 2.0 5.0 3.5 2.4 235 chr3L 17834304 intron Grd + chr3L 17834422 intron Grd + chr3L 17834539 intron Grd + chr3L_11_17830001 chr3L_17830001 Sg4 1524 chr3L 17837601 17837655 chr3L 17837714 17837768 30 113 8.5 7.0 7.8 3.4 167 chr3L 17837601 exon Grd + chr3L 17837684 intron Grd + chr3L 17837768 exon Grd + chr3L_30_17835001 chr3L_17835001 Sg4 1525 chr3L 17884670 17884708 chr3L 17884795 17884833 5 125 1.5 1.5 1.5 2.0 163 chr3L 17884670 intergenic CG5506 - chr3L 17884752 intergenic CG5506 - chr3L 17884833 intergenic CG5506 - chr3L_5_17880001 chr3L_17880001 Sg4 1526 chr3L 17887854 17887879 chr3L 17887964 17887989 5 110 1.0 3.0 2.0 1.7 135 chr3L 17887854 intron CG7402 + chr3L 17887922 intron CG7402 + chr3L 17887989 intron CG7402 + chr3L_5_17885001 chr3L_17885001 Sg4 1527 chr3L 17918353 17918384 chr3L 17921174 17921212 opus 5 2827 6.5 3.5 5.0 0.8 2859 chr3L 17918353 intergenic not near genes chr3L 17919782 intergenic not near genes chr3L 17921212 intergenic not near genes chr3L_5_17915001 chr3L_17915001 Sg4 1528 chr3L 17921855 17921882 chr3L 17921967 17921994 5 112 5.0 5.0 5.0 0.8 139 chr3L 17921855 intergenic not near genes chr3L 17921924 intergenic not near genes chr3L 17921994 intergenic not near genes chr3L_5_17920001 chr3L_17920001 Sg4 1529 chr3L 17915030 17915073 chr3L 17981208 17981251 8 66178 15.0 16.5 15.8 0.5 66221 chr3L 17915030 intergenic not near genes chr3L 17948140 intergenic CR45393 - chr3L 17981251 intron Eip75B - chr3L_8_17945001 chr3L_17945001 Sg4 1530 chr3L 17991556 17991579 chr3L 17991659 17991682 7 103 5.5 2.0 3.8 1.5 126 chr3L 17991556 intron Eip75B - chr3L 17991619 intron Eip75B - chr3L 17991682 intron Eip75B - chr3L_7_17990001 chr3L_17990001 Sg4 1531 chr3L 18000653 18000705 chr3L 18000755 18000807 18 101 2.5 4.0 3.2 4.3 154 chr3L 18000653 intron Eip75B - chr3L 18000730 intron Eip75B - chr3L 18000807 intron Eip75B - chr3L_18_18000001 chr3L_18000001 Sg4 1532 chr3L 18011910 18011940 chr3L 18012250 18012280 9 339 3.0 6.5 4.8 1.6 370 chr3L 18011910 intron Eip75B - chr3L 18012095 intron Eip75B - chr3L 18012280 intron Eip75B - chr3L_9_18010001 chr3L_18010001 Sg4 1533 chr3L 18020542 18020584 chr3L 18020673 18020715 10 131 2.5 0.5 1.5 4.0 173 chr3L 18020542 intron Eip75B - chr3L 18020628 intron Eip75B - chr3L 18020715 intron Eip75B - chr3L_10_18020001 chr3L_18020001 Sg4 1534 chr3L 18047685 18047741 chr3L 18056767 18056782 roo 6 9075 2.0 0.5 1.2 2.7 9097 chr3L 18047685 intron Eip75B - chr3L 18052234 intron Eip75B - chr3L 18056782 intron Eip75B - chr3L_6_18050001 chr3L_18050001 Sg4 1535 chr3L 18056781 18056818 chr3L 18056885 18056922 7 104 0.5 2.0 1.2 3.2 141 chr3L 18056781 intron Eip75B - chr3L 18056852 intron Eip75B - chr3L 18056922 intron Eip75B - chr3L_7_18055001 chr3L_18055001 Sg4 1536 chr3L 18077477 18077522 chr3L 18078163 18078208 8 686 9.5 9.0 9.2 0.8 731 chr3L 18077477 intergenic CR45392 + chr3L 18077842 5` UTR CR45392 + chr3L 18078208 intergenic CR45392 + chr3L_8_18075001 chr3L_18075001 Sg4 1537 chr3L 18092759 18092781 chr3L 18092899 18092921 7 140 7.0 0.0 3.5 1.6 162 chr3L 18092759 intron CG13698 - chr3L 18092840 intron CG13698 - chr3L 18092921 intron CG13698 - chr3L_7_18090001 chr3L_18090001 Sg4 1538 chr3L 18107597 18107644 chr3L 18107715 18107762 12 116 1.5 4.0 2.8 3.2 165 chr3L 18107597 intergenic mRpS26 +,CG5147 - chr3L 18107680 intergenic CG5147 -,mRpS26 + chr3L 18107762 intergenic CG5147 -,mRpS26 + chr3L_12_18105001 chr3L_18105001 Sg4 1539 chr3L 18119618 18119671 chr3L 18119755 18119794 10 128 0.0 6.0 3.0 2.5 176 chr3L 18119618 intron CG7341 + chr3L 18119706 intron CG7341 + chr3L 18119794 5` UTR CG7341 + chr3L_10_18115001 chr3L_18115001 Sg4 1540 chr3L 18129736 18129749 chr3L 18129904 18129906 4 165 6.5 7.0 6.8 0.5 170 chr3L 18129736 3` UTR Cyp312a1 - chr3L 18129821 3` UTR Cyp312a1 - chr3L 18129906 3` UTR Cyp312a1 - chr3L_4_18125001 chr3L_18125001 Sg4 1541 chr3L 18150381 18150432 chr3L 18150507 18150571 5 131 3.0 0.0 1.5 2.0 190 chr3L 18150381 intron CG7330 + chr3L 18150476 intron CG7330 + chr3L 18150571 intron CG7330 + chr3L_5_18150001 chr3L_18150001 Sg4 1542 chr3L 18172668 18172673 chr3L 18172769 18172774 4 101 8.5 0.0 4.2 0.8 106 chr3L 18172668 intron W - chr3L 18172721 intron W - chr3L 18172774 intron W - chr3L_4_18170001 chr3L_18170001 Sg4 1543 chr3L 18223138 18223184 chr3L 18223246 18223304 9 111 3.5 0.0 1.8 3.2 166 chr3L 18223138 intergenic not near genes chr3L 18223221 intergenic not near genes chr3L 18223304 intergenic not near genes chr3L_9_18220001 chr3L_18220001 Sg4 1544 chr3L 18262454 18262478 chr3L 18262562 18262586 6 108 1.5 2.5 2.0 2.0 132 chr3L 18262454 intergenic not near genes chr3L 18262520 intergenic not near genes chr3L 18262586 intergenic not near genes chr3L_6_18260001 chr3L_18260001 Sg4 1545 chr3L 18301336 18301377 chr3L 18301450 18301491 4 114 0.0 4.5 2.2 1.2 155 chr3L 18301336 intergenic CG13700 - chr3L 18301414 intergenic CG13700 - chr3L 18301491 intergenic CG13700 - chr3L_4_18300001 chr3L_18300001 Sg4 1546 chr3L 18323923 18323969 chr3L 18324037 18324083 12 110 3.0 2.5 2.8 3.2 160 chr3L 18323923 intergenic not near genes chr3L 18324003 intergenic not near genes chr3L 18324083 intergenic not near genes chr3L_12_18320001 chr3L_18320001 Sg4 1547 chr3L 18408708 18408755 chr3L 18408819 18408866 5 111 2.0 1.5 1.8 1.8 158 chr3L 18408708 intergenic not near genes chr3L 18408787 intergenic not near genes chr3L 18408866 intergenic not near genes chr3L_5_18405001 chr3L_18405001 Sg4 1548 chr3L 18411737 18411741 chr3L 18411905 18411909 4 168 9.5 1.0 5.2 0.6 172 chr3L 18411737 intergenic not near genes chr3L 18411823 intergenic not near genes chr3L 18411909 intergenic not near genes chr3L_4_18410001 chr3L_18410001 Sg4 1549 chr3L 18411743 18411751 chr3L 18411902 18411908 4 160 8.0 1.0 4.5 0.7 165 chr3L 18411743 intergenic not near genes chr3L 18411826 intergenic not near genes chr3L 18411908 intergenic not near genes chr3L_4_18410001 chr3L_18410001 Sg4 1550 chr3L 18456263 18456269 chr3L 18456376 18456377 4 112 2.5 3.0 2.8 1.1 114 chr3L 18456263 intergenic CR44670 - chr3L 18456320 intergenic CR44670 - chr3L 18456377 intergenic CR44670 - chr3L_4_18455001 chr3L_18455001 Sg4 1551 chr3L 18484683 18484703 chr3L 18488627 18488647 4 3944 16.5 37.5 27.0 0.1 3964 chr3L 18484683 intergenic AstC-R2 - chr3L 18486665 3` UTR AstC-R2 - chr3L 18488647 exon AstC-R2 - chr3L_4_18485001 chr3L_18485001 Sg4 1552 chr3L 18506123 18506160 chr3L 18509611 18509648 F-element 6 3488 0.5 2.0 1.2 2.7 3525 chr3L 18506123 intergenic not near genes chr3L 18507886 intergenic not near genes chr3L 18509648 intergenic not near genes chr3L_6_18505001 chr3L_18505001 Sg4 1553 chr3L 18528605 18528641 chr3L 18537791 18537827 roo 6 9186 2.5 1.5 2.0 2.0 9222 chr3L 18528605 intergenic not near genes chr3L 18533216 intergenic not near genes chr3L 18537827 intergenic not near genes chr3L_6_18530001 chr3L_18530001 Sg4 1554 chr3L 18321980 18322014 chr3L 18571601 18571635 4 249621 9.5 3.5 6.5 0.5 249655 chr3L 18321980 intergenic not near genes chr3L 18446808 intergenic not near genes chr3L 18571635 intron AstC-R1 + chr3L_4_18445001 chr3L_18445001 Sg4 1555 chr3L 18593933 18593961 chr3L 18595938 18595960 Doc 9 2004 5.0 1.5 3.2 2.1 2027 chr3L 18593933 intergenic term - chr3L 18594946 intergenic not near genes chr3L 18595960 intergenic CR45389 + chr3L_9_18590001 chr3L_18590001 Sg4 1556 chr3L 18695942 18695967 chr3L 18696082 18696086 6 140 7.5 9.5 8.5 0.6 144 chr3L 18695942 intergenic CG6893 +,Dic4 - chr3L 18696014 intergenic CG6893 +,Dic4 - chr3L 18696086 intergenic Dic4 -,CG6893 + chr3L_6_18695001 chr3L_18695001 Sg4 1557 chr3L 18710769 18710792 chr3L 18718744 18718767 Stalker2 6 7975 2.0 1.0 1.5 2.4 7998 chr3L 18710769 intergenic not near genes chr3L 18714768 intergenic not near genes chr3L 18718767 intergenic not near genes chr3L_6_18710001 chr3L_18710001 Sg4 1558 chr3L 18721746 18721795 chr3L 18721862 18721911 5 116 4.0 1.0 2.5 1.4 165 chr3L 18721746 intergenic CG12477 - chr3L 18721828 intergenic CG12477 - chr3L 18721911 3` UTR CG12477 - chr3L_5_18720001 chr3L_18720001 Sg4 1559 chr3L 18738665 18738694 chr3L 18738768 18738807 5 111 2.5 3.5 3.0 1.2 142 chr3L 18738665 intergenic not near genes chr3L 18738736 intergenic not near genes chr3L 18738807 intergenic not near genes chr3L_5_18735001 chr3L_18735001 Sg4 1560 chr3L 18753533 18753563 chr3L 18753640 18753670 5 107 3.0 1.0 2.0 1.7 137 chr3L 18753533 intron ftz-f1 - chr3L 18753602 intron ftz-f1 - chr3L 18753670 intron ftz-f1 - chr3L_5_18750001 chr3L_18750001 Sg4 1561 chr3L 18770630 18770674 chr3L 18770740 18770784 10 110 2.0 2.5 2.2 3.1 154 chr3L 18770630 intron ftz-f1 - chr3L 18770707 intron ftz-f1 - chr3L 18770784 intron ftz-f1 - chr3L_10_18770001 chr3L_18770001 Sg4 1562 chr3L 18772386 18772432 chr3L 18781092 18781138 roo 8 8705 3.5 3.0 3.2 1.9 8752 chr3L 18772386 intron ftz-f1 - chr3L 18776762 intron ftz-f1 - chr3L 18781138 intron ftz-f1 - chr3L_8_18775001 chr3L_18775001 Sg4 1563 chr3L 18784376 18784406 chr3L 18784490 18784520 6 114 2.0 2.0 2.0 2.0 144 chr3L 18784376 intron ftz-f1 - chr3L 18784448 intron ftz-f1 - chr3L 18784520 intron ftz-f1 - chr3L_6_18780001 chr3L_18780001 Sg4 1564 chr3L 18797288 18797324 chr3L 18797397 18797433 6 109 2.0 2.5 2.2 1.9 145 chr3L 18797288 intron ftz-f1 - chr3L 18797360 intron ftz-f1 - chr3L 18797433 intron ftz-f1 - chr3L_6_18795001 chr3L_18795001 Sg4 1565 chr3L 18843840 18843864 chr3L 18843963 18843987 7 123 5.0 1.0 3.0 1.8 147 chr3L 18843840 intron Indy - chr3L 18843914 intron Indy - chr3L 18843987 intron Indy - chr3L_7_18840001 chr3L_18840001 Sg4 1566 chr3L 18924455 18924504 chr3L 18924556 18924605 8 101 2.0 2.5 2.2 2.5 150 chr3L 18924455 intron CG32204 - chr3L 18924530 intron CG32204 - chr3L 18924605 intron CG32204 - chr3L_8_18920001 chr3L_18920001 Sg4 1567 chr3L 18932327 18932376 chr3L 18932484 18932533 11 157 4.0 3.5 3.8 2.3 206 chr3L 18932327 intron CG32204 - chr3L 18932430 intron CG32204 - chr3L 18932533 intron CG32204 - chr3L_11_18930001 chr3L_18930001 Sg4 1568 chr3L 18933608 18933655 chr3L 18933727 18933773 7 119 4.0 3.5 3.8 1.5 165 chr3L 18933608 intron CG32204 - chr3L 18933690 intron CG32204 - chr3L 18933773 intron CG32204 - chr3L_7_18930001 chr3L_18930001 Sg4 1569 chr3L 18935114 18935166 chr3L 18935227 18935279 12 112 3.0 0.5 1.8 4.3 165 chr3L 18935114 intron CG32204 - chr3L 18935196 intron CG32204 - chr3L 18935279 intron CG32204 - chr3L_12_18935001 chr3L_18935001 Sg4 1570 chr3L 18941690 18941718 chr3L 18941808 18941836 9 118 3.0 7.0 5.0 1.5 146 chr3L 18941690 intron CG32204 - chr3L 18941763 intron CG32204 - chr3L 18941836 intron CG32204 - chr3L_9_18940001 chr3L_18940001 Sg4 1571 chr3L 18969573 18969622 chr3L 18969694 18969743 13 120 4.0 6.5 5.2 2.1 170 chr3L 18969573 intergenic not near genes chr3L 18969658 intergenic not near genes chr3L 18969743 intergenic not near genes chr3L_13_18965001 chr3L_18965001 Sg4 1572 chr3L 19078368 19078408 chr3L 19079581 19079621 14 1213 18.0 24.0 21.0 0.6 1253 chr3L 19078368 intron Mkp3 - chr3L 19078994 intron Mkp3 - chr3L 19079621 intron Mkp3 - chr3L_14_19075001 chr3L_19075001 Sg4 1573 chr3L 19115620 19115663 chr3L 19115825 19115858 BS 10 203 4.0 2.5 3.2 2.4 238 chr3L 19115620 intron CG14082 - chr3L 19115739 intron CG14082 - chr3L 19115858 intron CG14082 - chr3L_10_19115001 chr3L_19115001 Sg4 1574 chr3L 19117020 19117072 chr3L 19124492 19124544 mdg1 11 7470 4.0 3.5 3.8 2.3 7524 chr3L 19117020 intron CG14082 - chr3L 19120782 intron CG14082 - chr3L 19124544 intron CG14082 - chr3L_11_19120001 chr3L_19120001 Sg4 1575 chr3L 19208036 19208088 chr3L 19209435 19209487 Doc 12 1399 4.0 1.5 2.8 3.2 1451 chr3L 19208036 intron fz2 - chr3L 19208762 intron fz2 - chr3L 19209487 intron fz2 - chr3L_12_19205001 chr3L_19205001 Sg4 1576 chr3L 19220633 19220633 chr3L 22908066 22908067 4 3687434 17.5 13.5 15.5 0.2 3687434 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908067 intergenic not near genes chr3L_4_21060001 chr3L_21060001 Sg4 1577 chr3L 19220637 19220637 chr3L 22908066 22908067 5 3687429 18.0 13.5 15.8 0.3 3687430 chr3L 19220637 intron fz2 - chr3L 21064352 intron siz + chr3L 22908067 intergenic not near genes chr3L_5_21060001 chr3L_21060001 Sg4 1578 chr3L 19248825 19248859 chr3L 19248940 19248974 11 114 2.0 4.5 3.2 2.6 149 chr3L 19248825 intergenic not near genes chr3L 19248900 intergenic not near genes chr3L 19248974 intergenic not near genes chr3L_11_19245001 chr3L_19245001 Sg4 1579 chr3L 19269791 19269848 chr3L 19270020 19270077 17 224 4.0 3.5 3.8 3.5 286 chr3L 19269791 intron,exon CG14085 +,CG14088 - chr3L 19269934 intron,exon CG14085 +,CG14088 - chr3L 19270077 intron,exon CG14085 +,CG14088 - chr3L_17_19265001 chr3L_19265001 Sg4 1580 chr3L 19293303 19293316 chr3L 19293842 19293856 4 540 4.0 2.5 3.2 1.0 553 chr3L 19293303 intergenic not near genes chr3L 19293580 intergenic not near genes chr3L 19293856 intergenic not near genes chr3L_4_19290001 chr3L_19290001 Sg4 1581 chr3L 19369826 19369871 chr3L 19369933 19369978 10 107 2.5 3.5 3.0 2.5 152 chr3L 19369826 intron CG32206 - chr3L 19369902 intron CG32206 - chr3L 19369978 intron CG32206 - chr3L_10_19365001 chr3L_19365001 Sg4 1582 chr3L 19386457 19386516 chr3L 19386586 19386645 12 129 4.5 2.0 3.2 2.9 188 chr3L 19386457 intron CG32206 - chr3L 19386551 intron CG32206 - chr3L 19386645 intron CG32206 - chr3L_12_19385001 chr3L_19385001 Sg4 1583 chr3L 19411214 19411262 chr3L 19411321 19411369 10 102 2.5 3.0 2.8 2.6 155 chr3L 19411214 intron CG32206 - chr3L 19411292 intron CG32206 - chr3L 19411369 intron CG32206 - chr3L_10_19410001 chr3L_19410001 Sg4 1584 chr3L 19417780 19417834 chr3L 19417885 19417939 13 104 2.0 4.0 3.0 3.2 159 chr3L 19417780 intergenic not near genes chr3L 19417860 intergenic not near genes chr3L 19417939 intergenic not near genes chr3L_13_19415001 chr3L_19415001 Sg4 1585 chr3L 19426733 19426776 chr3L 19426836 19426879 11 98 7.5 4.5 6.0 1.6 146 chr3L 19426733 intergenic not near genes chr3L 19426806 intergenic not near genes chr3L 19426879 intergenic not near genes chr3L_11_19425001 chr3L_19425001 Sg4 1586 chr3L 19439240 19439289 chr3L 19439363 19439409 6 120 1.5 5.0 3.2 1.4 169 chr3L 19439240 intergenic not near genes chr3L 19439324 intergenic not near genes chr3L 19439409 intergenic not near genes chr3L_6_19435001 chr3L_19435001 Sg4 1587 chr3L 19488480 19488496 chr3L 19488584 19488603 4 106 11.0 3.5 7.2 0.5 123 chr3L 19488480 intergenic pncr009:3L -,CG32212 + chr3L 19488542 intergenic pncr009:3L -,CG32212 + chr3L 19488603 intergenic pncr009:3L -,CG32212 + chr3L_4_19485001 chr3L_19485001 Sg4 1588 chr3L 19513387 19513416 chr3L 19513481 19513520 7 102 5.0 4.5 4.8 1.2 133 chr3L 19513387 intergenic not near genes chr3L 19513454 intergenic not near genes chr3L 19513520 intergenic not near genes chr3L_7_19510001 chr3L_19510001 Sg4 1589 chr3L 19554794 19554849 chr3L 19554914 19554968 10 118 3.5 2.0 2.8 2.6 174 chr3L 19554794 intergenic CG9300 + chr3L 19554881 intergenic CG9300 + chr3L 19554968 intergenic CG9300 + chr3L_10_19550001 chr3L_19550001 Sg4 1590 chr3L 19576357 19576394 chr3L 19576459 19576486 6 100 5.0 2.0 3.5 1.3 129 chr3L 19576357 intron Shal - chr3L 19576422 intron Shal - chr3L 19576486 intron Shal - chr3L_6_19575001 chr3L_19575001 Sg4 1591 chr3L 19669506 19669519 chr3L 19669603 19669618 4 100 9.5 4.5 7.0 0.5 112 chr3L 19669506 intergenic not near genes chr3L 19669562 intergenic not near genes chr3L 19669618 intergenic not near genes chr3L_4_19665001 chr3L_19665001 Sg4 1592 chr3L 19792340 19792366 chr3L 19792460 19792486 5 120 8.5 6.0 7.2 0.6 146 chr3L 19792340 intron,intron CG42637 -,Gyc76C - chr3L 19792413 intron,intron CG42637 -,Gyc76C - chr3L 19792486 intron,intron CG42637 -,Gyc76C - chr3L_5_19790001 chr3L_19790001 Sg4 1593 chr3L 19820275 19820316 chr3L 19827849 19827885 412 13 7574 4.5 2.0 3.2 3.1 7610 chr3L 19820275 intron Deaf1 + chr3L 19824080 intron Deaf1 + chr3L 19827885 intron Deaf1 + chr3L_13_19820001 chr3L_19820001 Sg4 1594 chr3L 19848483 19848524 chr3L 19857698 19857739 roo 5 9215 4.5 4.0 4.2 1.0 9256 chr3L 19848483 intron Papss + chr3L 19853111 intron Papss + chr3L 19857739 intron Papss + chr3L_5_19850001 chr3L_19850001 Sg4 1595 chr3L 19899712 19899724 chr3L 19900144 19900156 4 432 14.5 4.5 9.5 0.4 444 chr3L 19899712 intron,intron Mi-2 -,Su(Tpl) - chr3L 19899934 intron,intron Mi-2 -,Su(Tpl) - chr3L 19900156 intron,intron Mi-2 -,Su(Tpl) - chr3L_4_19895001 chr3L_19895001 Sg4 1596 chr3L 19933517 19933553 chr3L 19934364 19934400 8 845 6.0 1.5 3.8 1.7 883 chr3L 19933517 intergenic CR45678 + chr3L 19933958 5` UTR CR45678 + chr3L 19934400 intergenic CR45678 + chr3L_8_19930001 chr3L_19930001 Sg4 1597 chr3L 19939594 19939636 chr3L 19939857 19939902 16 266 2.5 2.5 2.5 4.6 308 chr3L 19939594 intron Ac76E + chr3L 19939748 intron Ac76E + chr3L 19939902 intron Ac76E + chr3L_16_19935001 chr3L_19935001 Sg4 1598 chr3L 19961264 19961308 chr3L 19961493 19961544 12 235 4.0 4.0 4.0 2.4 280 chr3L 19961264 intron Ac76E + chr3L 19961404 intron Ac76E + chr3L 19961544 intron Ac76E + chr3L_12_19960001 chr3L_19960001 Sg4 1599 chr3L 19981178 19981236 chr3L 19981283 19981341 13 105 4.0 2.5 3.2 3.1 163 chr3L 19981178 intergenic not near genes chr3L 19981260 intergenic CG17732 + chr3L 19981341 intergenic CG17732 + chr3L_13_19980001 chr3L_19980001 Sg4 1600 chr3L 20009639 20009691 chr3L 20009885 20009924 16 244 5.0 7.5 6.2 2.2 285 chr3L 20009639 exon kug + chr3L 20009782 exon kug + chr3L 20009924 exon kug + chr3L_16_20005001 chr3L_20005001 Sg4 1601 chr3L 20086765 20086802 chr3L 20086868 20086898 10 102 1.5 0.0 0.8 5.6 133 chr3L 20086765 intron sNPF-R - chr3L 20086832 intron sNPF-R - chr3L 20086898 intron sNPF-R - chr3L_10_20085001 chr3L_20085001 Sg4 1602 chr3L 20113638 20113683 chr3L 20122920 20122963 roo 17 9281 4.0 5.5 4.8 2.9 9325 chr3L 20113638 intergenic not near genes chr3L 20118300 intergenic not near genes chr3L 20122963 intergenic not near genes chr3L_17_20115001 chr3L_20115001 Sg4 1603 chr3L 20143060 20143107 chr3L 20143165 20143212 16 104 8.0 5.5 6.8 2.1 152 chr3L 20143060 intergenic not near genes chr3L 20143136 intergenic not near genes chr3L 20143212 intergenic not near genes chr3L_16_20140001 chr3L_20140001 Sg4 1604 chr3L 20150705 20150751 chr3L 20150861 20150907 20 156 3.0 4.0 3.5 4.4 202 chr3L 20150705 3` UTR CG42674 - chr3L 20150806 3` UTR CG42674 - chr3L 20150907 3` UTR CG42674 - chr3L_20_20150001 chr3L_20150001 Sg4 1605 chr3L 20177219 20177273 chr3L 20177333 20177368 46 111 14.5 8.0 11.2 3.8 149 chr3L 20177219 intron CG42674 - chr3L 20177294 intron CG42674 - chr3L 20177368 intron CG42674 - chr3L_46_20175001 chr3L_20175001 Sg4 1606 chr3L 20184996 20185053 chr3L 20185188 20185246 15 192 29.5 29.5 29.5 0.5 250 chr3L 20184996 intron CG42674 - chr3L 20185121 intron CG42674 - chr3L 20185246 intron CG42674 - chr3L_15_20185001 chr3L_20185001 Sg4 1607 chr3L 20233405 20233463 chr3L 20233527 20233591 5 124 3.5 3.5 3.5 1.1 186 chr3L 20233405 3` UTR CG17233 - chr3L 20233498 3` UTR CG17233 - chr3L 20233591 3` UTR CG17233 - chr3L_5_20230001 chr3L_20230001 Sg4 1608 chr3L 20255846 20255900 chr3L 20257263 20257317 11 1417 17.5 20.5 19.0 0.6 1471 chr3L 20255846 intron rdgC + chr3L 20256582 exon rdgC + chr3L 20257317 intron rdgC + chr3L_11_20255001 chr3L_20255001 Sg4 1609 chr3L 20257318 20257338 chr3L 20258459 20258479 pogo 9 1141 10.5 13.0 11.8 0.7 1161 chr3L 20257318 intron rdgC + chr3L 20257898 intron rdgC + chr3L 20258479 intron rdgC + chr3L_9_20255001 chr3L_20255001 Sg4 1610 chr3L 20257343 20257363 chr3L 20258458 20258504 pogo 14 1139 6.0 13.0 9.5 1.3 1161 chr3L 20257343 intron rdgC + chr3L 20257924 intron rdgC + chr3L 20258504 intron rdgC + chr3L_14_20255001 chr3L_20255001 Sg4 1611 chr3L 20290289 20290342 chr3L 20290399 20290452 26 109 7.5 5.5 6.5 3.5 163 chr3L 20290289 intron gogo - chr3L 20290370 intron gogo - chr3L 20290452 intron gogo - chr3L_26_20290001 chr3L_20290001 Sg4 1612 chr3L 20321090 20321129 chr3L 20342876 20342910 17.6 7 21782 16.5 25.5 21.0 0.3 21820 chr3L 20321090 exon Spn77Bb + chr3L 20332000 intergenic not near genes chr3L 20342910 exon Spn77Bc + chr3L_7_20330001 chr3L_20330001 Sg4 1613 chr3L 20422986 20423038 chr3L 20423226 20423268 35 235 11.5 6.5 9.0 3.5 282 chr3L 20422986 exon zye + chr3L 20423127 exon zye + chr3L 20423268 exon zye + chr3L_35_20420001 chr3L_20420001 Sg4 1614 chr3L 20462564 20462603 chr3L 20462670 20462709 14 106 4.0 6.0 5.0 2.3 145 chr3L 20462564 intron atk - chr3L 20462636 intron atk - chr3L 20462709 intron atk - chr3L_14_20460001 chr3L_20460001 Sg4 1615 chr3L 20476736 20476778 chr3L 20484360 20484402 springer 13 7624 6.5 4.5 5.5 2.0 7666 chr3L 20476736 3` UTR isoQC + chr3L 20480569 intergenic not near genes chr3L 20484402 3` UTR ZnT77C - chr3L_13_20480001 chr3L_20480001 Sg4 1616 chr3L 20487643 20487669 chr3L 20488119 20488145 INE-1 14 476 8.0 9.0 8.5 1.5 502 chr3L 20487643 intron ZnT77C - chr3L 20487894 intron ZnT77C - chr3L 20488145 exon ZnT77C - chr3L_14_20485001 chr3L_20485001 Sg4 1617 chr3L 20590042 20590094 chr3L 20590606 20590658 412 22 563 4.0 4.5 4.2 4.2 616 chr3L 20590042 intergenic not near genes chr3L 20590350 intergenic not near genes chr3L 20590658 intergenic not near genes chr3L_22_20590001 chr3L_20590001 Sg4 1618 chr3L 20106433 20106436 chr3L 20667356 20667381 15 560921 41.5 29.5 35.5 0.4 560948 chr3L 20106433 exon CG14185 + chr3L 20386907 intron fbl + chr3L 20667381 intergenic not near genes chr3L_15_20385001 chr3L_20385001 Sg4 1619 chr3L 20721412 20721461 chr3L 20721556 20721605 15 144 4.0 3.0 3.5 3.3 193 chr3L 20721412 intergenic not near genes chr3L 20721508 intergenic not near genes chr3L 20721605 intergenic not near genes chr3L_15_20720001 chr3L_20720001 Sg4 1620 chr3L 20821275 20821300 chr3L 20824769 20824794 NOF 8 3493 2.0 5.0 3.5 1.8 3519 chr3L 20821275 intron Pka-R1 + chr3L 20823034 intron Pka-R1 + chr3L 20824794 intron Pka-R1 + chr3L_8_20820001 chr3L_20820001 Sg4 1621 chr3L 20826341 20826390 chr3L 20826557 20826606 21 213 4.5 3.5 4.0 4.2 265 chr3L 20826341 intron Pka-R1 + chr3L 20826474 intron Pka-R1 + chr3L 20826606 intron Pka-R1 + chr3L_21_20825001 chr3L_20825001 Sg4 1622 chr3L 20849264 20849289 chr3L 20849368 20849393 8 103 2.5 5.0 3.8 1.7 129 chr3L 20849264 intron CG32432 - chr3L 20849328 intron CG32432 - chr3L 20849393 intron CG32432 - chr3L_8_20845001 chr3L_20845001 Sg4 1623 chr3L 20886804 20886812 chr3L 20886905 20886913 4 101 5.5 2.5 4.0 0.8 109 chr3L 20886804 intergenic CR44686 - chr3L 20886858 intergenic CR44686 - chr3L 20886913 intergenic CR44686 - chr3L_4_20885001 chr3L_20885001 Sg4 1624 chr3L 20913737 20913776 chr3L 20913839 20913883 10 105 3.0 5.5 4.2 1.9 146 chr3L 20913737 intergenic CR43930 - chr3L 20913810 intergenic CR43930 - chr3L 20913883 intergenic CR43930 - chr3L_10_20910001 chr3L_20910001 Sg4 1625 chr3L 21014889 21014947 chr3L 21023395 21023453 Tirant 17 8506 3.5 5.0 4.2 3.3 8564 chr3L 21014889 intron skd - chr3L 21019171 intron skd - chr3L 21023453 intron skd - chr3L_17_21015001 chr3L_21015001 Sg4 1626 chr3L 21093756 21093808 chr3L 21093894 21093935 16 135 5.0 3.5 4.2 3.1 179 chr3L 21093756 intron ko - chr3L 21093846 intron ko - chr3L 21093935 intron ko - chr3L_16_21090001 chr3L_21090001 Sg4 1627 chr3L 21151844 21151891 chr3L 21156953 21157000 flea 10 5109 3.0 3.5 3.2 2.4 5156 chr3L 21151844 intron Ac78C - chr3L 21154422 intron Ac78C - chr3L 21157000 intron Ac78C - chr3L_10_21150001 chr3L_21150001 Sg4 1628 chr3L 21243732 21243754 chr3L 21251310 21251331 412 5 7580 8.5 3.0 5.8 0.7 7599 chr3L 21243732 intron Eip78C + chr3L 21247532 intron Eip78C + chr3L 21251331 intron Eip78C + chr3L_5_21245001 chr3L_21245001 Sg4 1629 chr3L 21306127 21306178 chr3L 21315311 21315362 roo 19 9182 3.5 2.0 2.8 5.0 9235 chr3L 21306127 3` UTR CG7632 + chr3L 21310744 intron Pc - chr3L 21315362 3` UTR Pc - chr3L_19_21310001 chr3L_21310001 Sg4 1630 chr3L 21372724 21372746 chr3L 21379257 21379279 McClintock 4 6533 2.0 4.5 3.2 1.0 6555 chr3L 21372724 intergenic not near genes chr3L 21376002 intergenic not near genes chr3L 21379279 intergenic not near genes chr3L_4_21375001 chr3L_21375001 Sg4 1631 chr3L 21406979 21407027 chr3L 21407083 21407131 9 104 2.5 5.5 4.0 1.8 152 chr3L 21406979 intron rgn + chr3L 21407055 intron rgn + chr3L 21407131 intron rgn + chr3L_9_21405001 chr3L_21405001 Sg4 1632 chr3L 21459837 21459885 chr3L 21459940 21459988 8 103 4.0 2.0 3.0 2.0 151 chr3L 21459837 intergenic not near genes chr3L 21459912 intergenic not near genes chr3L 21459988 intergenic not near genes chr3L_8_21455001 chr3L_21455001 Sg4 1633 chr3L 21498829 21498869 chr3L 21500484 21500525 1360 6 1658 3.0 9.0 6.0 0.9 1696 chr3L 21498829 5` UTR,intron CR43933 +,Glg1 - chr3L 21499677 intron Glg1 - chr3L 21500525 intron Glg1 - chr3L_6_21495001 chr3L_21495001 Sg4 1634 chr3L 21501148 21501154 chr3L 21501267 21501273 1360 6 119 5.0 7.5 6.2 0.8 125 chr3L 21501148 intron Glg1 - chr3L 21501210 intron Glg1 - chr3L 21501273 intron Glg1 - chr3L_6_21500001 chr3L_21500001 Sg4 1635 chr3L 21539807 21539858 chr3L 21542830 21542835 12 3014 7.5 11.5 9.5 1.1 3028 chr3L 21539807 intergenic VhaM9.7-b +,CoVIII - chr3L 21541321 intergenic VhaM9.7-b + chr3L 21542835 exon CG33290 + chr3L_12_21540001 chr3L_21540001 Sg4 1636 chr3L 21649757 21649798 chr3L 21650006 21650047 18 248 4.5 2.5 3.5 4.0 290 chr3L 21649757 intron CG43980 + chr3L 21649902 intron CG43980 + chr3L 21650047 intron CG43980 + chr3L_18_21645001 chr3L_21645001 Sg4 1637 chr3L 21699232 21699285 chr3L 21699538 21699591 10 304 2.0 2.0 2.0 3.3 359 chr3L 21699232 intron CG32447 - chr3L 21699412 intron CG32447 - chr3L 21699591 intron CG32447 - chr3L_10_21695001 chr3L_21695001 Sg4 1638 chr3L 21710322 21710379 chr3L 21710512 21710569 12 192 22.0 30.5 26.2 0.4 247 chr3L 21710322 intergenic not near genes chr3L 21710446 intergenic not near genes chr3L 21710569 intergenic not near genes chr3L_12_21710001 chr3L_21710001 Sg4 1639 chr3L 21749293 21749340 chr3L 21754478 21754482 Doc 7 5173 10.5 5.0 7.8 0.8 5189 chr3L 21749293 intron Syn1 - chr3L 21751888 intron Syn1 - chr3L 21754482 intron Syn1 - chr3L_7_21750001 chr3L_21750001 Sg4 1640 chr3L 21767015 21767065 chr3L 21767121 21767170 13 106 5.0 5.5 5.2 2.1 155 chr3L 21767015 intron Syn1 - chr3L 21767092 intron Syn1 - chr3L 21767170 intron Syn1 - chr3L_13_21765001 chr3L_21765001 Sg4 1641 chr3L 21770017 21770040 chr3L 21770129 21770152 5 112 6.0 9.0 7.5 0.6 135 chr3L 21770017 5` UTR,intron,5` UTR Syn1 -,CG42689 +,CG7370 + chr3L 21770084 5` UTR,intron,intron Syn1 -,CG42689 +,CG7370 + chr3L 21770152 5` UTR,intron,intron Syn1 -,CG42689 +,CG7370 + chr3L_5_21770001 chr3L_21770001 Sg4 1642 chr3L 21776665 21776695 chr3L 21776776 21776807 10 111 2.0 1.5 1.8 3.6 142 chr3L 21776665 intron,intron CG42689 +,CG42552 + chr3L 21776736 intron,intron CG42689 +,CG42552 + chr3L 21776807 intron,intron CG42689 +,CG42552 + chr3L_10_21775001 chr3L_21775001 Sg4 1643 chr3L 21789500 21789537 chr3L 21789605 21789645 13 104 6.0 6.0 6.0 1.9 145 chr3L 21789500 intergenic not near genes chr3L 21789572 intergenic not near genes chr3L 21789645 intergenic not near genes chr3L_13_21785001 chr3L_21785001 Sg4 1644 chr3L 21809957 21809961 chr3L 21810070 21810074 4 113 14.5 12.5 13.5 0.3 117 chr3L 21809957 intron eg + chr3L 21810016 intron eg + chr3L 21810074 intron eg + chr3L_4_21810001 chr3L_21810001 Sg4 1645 chr3L 21852235 21852282 chr3L 21852353 21852400 10 115 4.0 3.0 3.5 2.2 165 chr3L 21852235 intron mub + chr3L 21852318 intron mub + chr3L 21852400 intron mub + chr3L_10_21850001 chr3L_21850001 Sg4 1646 chr3L 21874479 21874525 chr3L 21874598 21874644 9 117 4.0 4.0 4.0 1.8 165 chr3L 21874479 intron mub + chr3L 21874562 intron mub + chr3L 21874644 intron mub + chr3L_9_21870001 chr3L_21870001 Sg4 1647 chr3L 21928279 21928323 chr3L 21930008 21930052 10 1729 4.5 4.5 4.5 1.8 1773 chr3L 21928279 3` UTR mub + chr3L 21929166 3` UTR mub + chr3L 21930052 3` UTR mub + chr3L_10_21925001 chr3L_21925001 Sg4 1648 chr3L 21966461 21966503 chr3L 21966569 21966576 6 93 2.5 6.5 4.5 1.1 115 chr3L 21966461 intron CS-2 + chr3L 21966518 intron CS-2 + chr3L 21966576 intron CS-2 + chr3L_6_21965001 chr3L_21965001 Sg4 1649 chr3L 21971481 21971534 chr3L 21971688 21971759 9 208 0.0 0.0 0.0 9.0 278 chr3L 21971481 intergenic not near genes chr3L 21971620 intergenic CG7470 + chr3L 21971759 intergenic CG7470 + chr3L_9_21970001 chr3L_21970001 Sg4 1650 chr3L 21972544 21972592 chr3L 21972727 21972775 16 180 1.0 1.0 1.0 8.0 231 chr3L 21972544 intron CG7470 + chr3L 21972660 intron CG7470 + chr3L 21972775 intron CG7470 + chr3L_16_21970001 chr3L_21970001 Sg4 1651 chr3L 22018681 22018736 chr3L 22018785 22018824 14 102 5.5 4.0 4.8 2.4 143 chr3L 22018681 intergenic not near genes chr3L 22018752 intergenic not near genes chr3L 22018824 intergenic not near genes chr3L_14_22015001 chr3L_22015001 Sg4 1652 chr3L 22023192 22023250 chr3L 22023309 22023367 8 115 1.5 3.0 2.2 2.5 175 chr3L 22023192 intergenic not near genes chr3L 22023280 intergenic not near genes chr3L 22023367 intergenic not near genes chr3L_8_22020001 chr3L_22020001 Sg4 1653 chr3L 22099681 22099703 chr3L 22105864 22105914 3S18 4 6204 4.0 4.5 4.2 0.8 6233 chr3L 22099681 intergenic not near genes chr3L 22102798 intergenic not near genes chr3L 22105914 intergenic not near genes chr3L_4_22100001 chr3L_22100001 Sg4 1654 chr3L 22124784 22124824 chr3L 22124892 22124932 11 106 3.5 1.5 2.5 3.1 148 chr3L 22124784 intergenic not near genes chr3L 22124858 intergenic not near genes chr3L 22124932 intergenic not near genes chr3L_11_22120001 chr3L_22120001 Sg4 1655 chr3L 22130485 22130521 chr3L 22130656 22130692 15 171 2.0 6.5 4.2 2.9 207 chr3L 22130485 intergenic not near genes chr3L 22130588 intergenic not near genes chr3L 22130692 intergenic not near genes chr3L_15_22130001 chr3L_22130001 Sg4 1656 chr3L 22163740 22163771 chr3L 22164560 22164585 4 816 4.5 3.0 3.8 0.8 845 chr3L 22163740 intron olf413 + chr3L 22164162 intron olf413 + chr3L 22164585 intron olf413 + chr3L_4_22160001 chr3L_22160001 Sg4 1657 chr3L 22169431 22169485 chr3L 22169549 22169598 8 116 3.5 3.0 3.2 1.9 167 chr3L 22169431 intron olf413 + chr3L 22169514 intron olf413 + chr3L 22169598 intron olf413 + chr3L_8_22165001 chr3L_22165001 Sg4 1658 chr3L 22328173 22328222 chr3L 22329062 22329111 14 888 9.0 15.0 12.0 1.1 938 chr3L 22328173 intron Ten-m - chr3L 22328642 intron Ten-m - chr3L 22329111 intron Ten-m - chr3L_14_22325001 chr3L_22325001 Sg4 1659 chr3L 22361930 22361971 chr3L 22362032 22362073 6 102 3.0 2.5 2.8 1.6 143 chr3L 22361930 intron Ten-m - chr3L 22362002 intron Ten-m - chr3L 22362073 intron Ten-m - chr3L_6_22360001 chr3L_22360001 Sg4 1660 chr3L 22395574 22395601 chr3L 22395682 22395709 4 108 4.5 3.0 3.8 0.8 135 chr3L 22395574 intron Ten-m - chr3L 22395642 intron Ten-m - chr3L 22395709 intron Ten-m - chr3L_4_22395001 chr3L_22395001 Sg4 1661 chr3L 22395607 22395631 chr3L 22395678 22395704 6 93 1.5 3.0 2.2 1.9 97 chr3L 22395607 intron Ten-m - chr3L 22395656 intron Ten-m - chr3L 22395704 intron Ten-m - chr3L_6_22395001 chr3L_22395001 Sg4 1662 chr3L 22411349 22411369 chr3L 22411447 22411451 6 91 4.0 4.0 4.0 1.2 102 chr3L 22411349 intergenic not near genes chr3L 22411400 intergenic not near genes chr3L 22411451 intergenic not near genes chr3L_6_22410001 chr3L_22410001 Sg4 1663 chr3L 22411371 22411393 chr3L 22411446 22411458 4 86 2.5 4.0 3.2 1.0 87 chr3L 22411371 intergenic not near genes chr3L 22411414 intergenic not near genes chr3L 22411458 intergenic not near genes chr3L_4_22410001 chr3L_22410001 Sg4 1664 chr3L 22507097 22507153 chr3L 22507209 22507265 20 103 3.0 6.0 4.5 3.6 168 chr3L 22507097 intergenic not near genes chr3L 22507181 intergenic not near genes chr3L 22507265 intergenic not near genes chr3L_20_22505001 chr3L_22505001 Sg4 1665 chr3L 22522672 22522726 chr3L 22522774 22522828 21 102 5.0 6.5 5.8 3.1 156 chr3L 22522672 intergenic not near genes chr3L 22522750 intergenic not near genes chr3L 22522828 intergenic not near genes chr3L_21_22520001 chr3L_22520001 Sg4 1666 chr3L 22542871 22542914 chr3L 22543017 22543060 21 146 2.5 2.0 2.2 6.6 189 chr3L 22542871 intergenic not near genes chr3L 22542966 intergenic not near genes chr3L 22543060 intergenic not near genes chr3L_21_22540001 chr3L_22540001 Sg4 1667 chr3L 22544371 22544415 chr3L 22544473 22544517 6 100 2.5 2.5 2.5 1.7 146 chr3L 22544371 intergenic not near genes chr3L 22544444 intergenic not near genes chr3L 22544517 intergenic not near genes chr3L_6_22540001 chr3L_22540001 Sg4 1668 chr3L 22554400 22554454 chr3L 22554501 22554555 17 101 4.0 4.5 4.2 3.3 155 chr3L 22554400 intergenic not near genes chr3L 22554478 intergenic not near genes chr3L 22554555 intergenic not near genes chr3L_17_22550001 chr3L_22550001 Sg4 1669 chr3L 22555746 22555801 chr3L 22563241 22563296 blood 17 7492 2.0 5.5 3.8 3.5 7550 chr3L 22555746 intergenic not near genes chr3L 22559521 intergenic not near genes chr3L 22563296 intergenic not near genes chr3L_17_22555001 chr3L_22555001 Sg4 1670 chr3L 22569560 22569599 chr3L 22569678 22569722 18 122 5.0 3.5 4.2 3.5 162 chr3L 22569560 intergenic not near genes chr3L 22569641 intergenic not near genes chr3L 22569722 intergenic not near genes chr3L_18_22565001 chr3L_22565001 Sg4 1671 chr3L 22577598 22577645 chr3L 22582411 22582458 Doc 13 4812 3.5 2.5 3.0 3.2 4860 chr3L 22577598 intergenic not near genes chr3L 22580028 intergenic not near genes chr3L 22582458 3` UTR CG14459 - chr3L_13_22580001 chr3L_22580001 Sg4 1672 chr3L 22617169 22617216 chr3L 22624645 22624693 blood 15 7477 4.5 5.5 5.0 2.5 7524 chr3L 22617169 intron CG14459 - chr3L 22620931 intron CG14459 - chr3L 22624693 intron CG14459 - chr3L_15_22620001 chr3L_22620001 Sg4 1673 chr3L 22732442 22732495 chr3L 22732548 22732601 14 106 3.0 2.0 2.5 4.0 159 chr3L 22732442 intron CG11367 + chr3L 22732522 intron CG11367 + chr3L 22732601 exon CG11367 + chr3L_14_22730001 chr3L_22730001 Sg4 1674 chr3L 22756373 22756428 chr3L 22756475 22756530 17 102 5.0 4.0 4.5 3.1 157 chr3L 22756373 intron SPoCk + chr3L 22756452 intron SPoCk + chr3L 22756530 intron SPoCk + chr3L_17_22755001 chr3L_22755001 Sg4 1675 chr3L 22761373 22761413 chr3L 22766832 22766872 Ivk 8 5458 3.5 6.0 4.8 1.4 5499 chr3L 22761373 intron SPoCk + chr3L 22764122 intron SPoCk + chr3L 22766872 intron SPoCk + chr3L_8_22760001 chr3L_22760001 Sg4 1676 chr3L 22771615 22771665 chr3L 22771716 22771771 20 98 9.5 2.5 6.0 2.9 156 chr3L 22771615 intron SPoCk + chr3L 22771693 intron SPoCk + chr3L 22771771 intron SPoCk + chr3L_20_22770001 chr3L_22770001 Sg4 1677 chr3L 22853669 22853718 chr3L 22853780 22853829 16 110 4.5 5.0 4.8 2.8 160 chr3L 22853669 5` UTR CR43426 + chr3L 22853749 5` UTR CR43426 + chr3L 22853829 5` UTR CR43426 + chr3L_16_22850001 chr3L_22850001 Sg4 1678 chr3L 22897176 22897225 chr3L 22897284 22897333 23 108 3.5 5.0 4.2 4.4 157 chr3L 22897176 intergenic not near genes chr3L 22897254 intergenic not near genes chr3L 22897333 intergenic not near genes chr3L_23_22895001 chr3L_22895001 Sg4 1679 chr3L 19220633 19220636 chr3L 22908066 22908066 9 3687432 18.0 13.5 15.8 0.5 3687433 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908066 intergenic not near genes chr3L_9_21060001 chr3L_21060001 Sg4 1680 chr3L 19220633 19220637 chr3L 22908067 22908067 9 3687432 18.0 13.5 15.8 0.5 3687434 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908067 intergenic not near genes chr3L_9_21060001 chr3L_21060001 Sg4 1681 chr3L 22909001 22909053 chr3L 22909117 22909169 13 115 5.0 5.5 5.2 2.1 168 chr3L 22909001 intergenic CR45661 + chr3L 22909085 intergenic CR45661 + chr3L 22909169 intergenic CR45661 + chr3L_13_22905001 chr3L_22905001 Sg4 1682 chr3L 22966405 22966450 chr3L 22966644 22966699 10 246 6.5 3.0 4.8 1.7 294 chr3L 22966405 intergenic not near genes chr3L 22966552 intergenic not near genes chr3L 22966699 intergenic not near genes chr3L_10_22965001 chr3L_22965001 Sg4 1683 chr3L 22989842 22989894 chr3L 22996840 22996893 297 18 6999 5.0 4.0 4.5 3.3 7051 chr3L 22989842 intergenic not near genes chr3L 22993368 intergenic not near genes chr3L 22996893 intergenic not near genes chr3L_18_22990001 chr3L_22990001 Sg4 1684 chr3L 23319634 23319683 chr3L 23319750 23319799 14 116 3.5 2.0 2.8 3.7 165 chr3L 23319634 intron alpha-Cat - chr3L 23319716 intron alpha-Cat - chr3L 23319799 intron alpha-Cat - chr3L_14_23315001 chr3L_23315001 Sg4 1685 chr3L 23468011 23468030 chr3L 23468153 23468172 11 142 22.5 32.5 27.5 0.4 161 chr3L 23468011 intergenic not near genes chr3L 23468092 intergenic not near genes chr3L 23468172 intergenic not near genes chr3L_11_23465001 chr3L_23465001 Sg4 1686 chr3L 23815308 23815329 chr3L 23815421 23815442 10 113 4.0 6.0 5.0 1.7 134 chr3L 23815308 intergenic not near genes chr3L 23815375 intergenic not near genes chr3L 23815442 intergenic not near genes chr3L_10_23815001 chr3L_23815001 Sg4 1687 chr3L 23824001 23824037 chr3L 23824439 23824475 10 438 3.0 2.5 2.8 2.6 474 chr3L 23824001 intergenic not near genes chr3L 23824238 intergenic not near genes chr3L 23824475 intergenic not near genes chr3L_10_23820001 chr3L_23820001 Sg4 1688 chr3L 23875502 23875556 chr3L 23875608 23875655 13 105 5.0 3.5 4.2 2.5 153 chr3L 23875502 intron CG40470 - chr3L 23875578 intron CG40470 - chr3L 23875655 intron CG40470 - chr3L_13_23875001 chr3L_23875001 Sg4 1689 chr3L 24012390 24012430 chr3L 24020756 24020796 roo 8 8366 4.0 2.0 3.0 2.0 8406 chr3L 24012390 intergenic not near genes chr3L 24016593 intergenic not near genes chr3L 24020796 intergenic not near genes chr3L_8_24015001 chr3L_24015001 Sg4 1690 chr3L 24168773 24168820 chr3L 24176126 24176173 ZAM 16 7352 5.0 6.0 5.5 2.5 7400 chr3L 24168773 intron Snap25 + chr3L 24172473 intron Snap25 + chr3L 24176173 intron Snap25 + chr3L_16_24170001 chr3L_24170001 Sg4 1691 chr3L 24241931 24241981 chr3L 24242043 24242089 19 108 3.5 7.0 5.2 3.1 158 chr3L 24241931 intron Snap25 + chr3L 24242010 intron Snap25 + chr3L 24242089 intron Snap25 + chr3L_19_24240001 chr3L_24240001 Sg4 1692 chr3L 24791888 24791911 chr3L 24796692 24796715 Doc 7 4804 5.5 3.5 4.5 1.3 4827 chr3L 24791888 intergenic not near genes chr3L 24794302 intergenic not near genes chr3L 24796715 intergenic not near genes chr3L_7_24790001 chr3L_24790001 Sg4 1693 chr3L 20525228 20525228 chr3L 24821492 24821494 4 4296264 20.5 11.5 16.0 0.2 4296266 chr3L 20525228 intron CG4825 - chr3L 22673361 intron CG14457 + chr3L 24821494 intergenic not near genes chr3L_4_22670001 chr3L_22670001 Sg4 1694 chr3L 24996188 24996242 chr3L 24996575 24996629 6 387 1.0 1.0 1.0 3.0 441 chr3L 24996188 intergenic not near genes chr3L 24996408 intergenic not near genes chr3L 24996629 intergenic not near genes chr3L_6_24995001 chr3L_24995001 Sg4 1695 chr3L 25331619 25331653 chr3L 25331735 25331769 14 114 5.0 11.5 8.2 1.5 150 chr3L 25331619 intergenic not near genes chr3L 25331694 intergenic not near genes chr3L 25331769 intergenic not near genes chr3L_14_25330001 chr3L_25330001 Sg4 1696 chr3L 25628497 25628516 chr3L 25633282 25633312 F-element 7 4794 4.5 7.0 5.8 1.0 4815 chr3L 25628497 intron CG41343 - chr3L 25630904 intron CG41343 - chr3L 25633312 intron CG41343 - chr3L_7_25630001 chr3L_25630001 Sg4 1697 chr3L 25635623 25635638 chr3L 25635738 25635753 6 115 6.0 3.0 4.5 1.1 130 chr3L 25635623 intron CG41343 - chr3L 25635688 intron CG41343 - chr3L 25635753 intron CG41343 - chr3L_6_25635001 chr3L_25635001 Sg4 1698 chr3L 26011001 26011041 chr3L 26011350 26011390 7 349 2.5 3.5 3.0 1.8 389 chr3L 26011001 intron CG40178 - chr3L 26011196 intron CG40178 - chr3L 26011390 intron CG40178 - chr3L_7_26010001 chr3L_26010001 Sg4 1699 chr3L 26026747 26026752 chr3L 26026862 26026867 4 115 28.5 26.0 27.2 0.1 120 chr3L 26026747 intergenic not near genes chr3L 26026807 intergenic not near genes chr3L 26026867 intergenic not near genes chr3L_4_26025001 chr3L_26025001 Sg4 1700 chr3L 26717648 26717694 chr3L 26717749 26717795 20 101 5.5 8.0 6.8 2.6 147 chr3L 26717648 intergenic not near genes chr3L 26717722 intergenic not near genes chr3L 26717795 intergenic not near genes chr3L_20_26715001 chr3L_26715001 Sg4 1701 chr3L 27269421 27269465 chr3L 27269524 27269573 10 107 1.5 2.5 2.0 3.3 152 chr3L 27269421 intergenic not near genes chr3L 27269497 intergenic not near genes chr3L 27269573 intergenic not near genes chr3L_10_27265001 chr3L_27265001 Sg4 1702 chr3R 97114 97117 chr3R 99845 99848 6 2732 11.0 18.0 14.5 0.4 2734 chr3R 97114 intergenic not near genes chr3R 98481 intergenic not near genes chr3R 99848 intergenic not near genes chr3R_6_95001 chr3R_95001 Sg4 1703 chr3R 2490872 2490930 chr3R 2491001 2491059 20 127 2.0 5.0 3.5 4.4 187 chr3R 2490872 intergenic not near genes chr3R 2490966 intergenic not near genes chr3R 2491059 intergenic not near genes chr3R_20_2490001 chr3R_2490001 Sg4 1704 chr3R 2534120 2534138 chr3R 2541707 2541732 12 7590 35.5 22.0 28.8 0.4 7612 chr3R 2534120 intergenic not near genes chr3R 2537926 intergenic not near genes chr3R 2541732 intergenic not near genes chr3R_12_2535001 chr3R_2535001 Sg4 1705 chr3R 2534139 2534154 chr3R 2541706 2541717 11 7582 25.0 22.0 23.5 0.4 7578 chr3R 2534139 intergenic not near genes chr3R 2537928 intergenic not near genes chr3R 2541717 intergenic not near genes chr3R_11_2535001 chr3R_2535001 Sg4 1706 chr3R 2534155 2534156 chr3R 2541702 2541750 5 7574 24.0 22.5 23.2 0.2 7595 chr3R 2534155 intergenic not near genes chr3R 2537952 intergenic not near genes chr3R 2541750 intergenic not near genes chr3R_5_2535001 chr3R_2535001 Sg4 1707 chr3R 2556883 2556936 chr3R 2557591 2557644 14 709 30.0 26.5 28.2 0.5 761 chr3R 2556883 intron CG41056 - chr3R 2557264 intron CG41056 - chr3R 2557644 intron CG41056 - chr3R_14_2555001 chr3R_2555001 Sg4 1708 chr3R 3989303 3989307 chr3R 4068947 4068951 mdg1 4 79644 18.0 12.5 15.2 0.2 79648 chr3R 3989303 intergenic not near genes chr3R 4029127 intergenic not near genes chr3R 4068951 intergenic not near genes chr3R_4_4025001 chr3R_4025001 Sg4 1709 chr3R 4132890 4132930 chr3R 4133069 4133109 13 179 0.5 2.0 1.2 5.9 219 chr3R 4132890 5` UTR Gfat1 + chr3R 4133000 intron Gfat1 + chr3R 4133109 intron Gfat1 + chr3R_13_4130001 chr3R_4130001 Sg4 1710 chr3R 4206047 4206101 chr3R 4211647 4211701 mdg3 9 5597 3.5 1.5 2.5 2.6 5654 chr3R 4206047 intron CG14636 - chr3R 4208874 intron CG14636 - chr3R 4211701 intron CG14636 - chr3R_9_4205001 chr3R_4205001 Sg4 1711 chr3R 4236921 4236974 chr3R 4237022 4237075 17 99 4.0 3.0 3.5 3.8 154 chr3R 4236921 intron Gel + chr3R 4236998 intron Gel + chr3R 4237075 intron Gel + chr3R_17_4235001 chr3R_4235001 Sg4 1712 chr3R 4366737 4366778 chr3R 4375145 4375186 roo 7 8408 6.5 3.0 4.8 1.2 8449 chr3R 4366737 3` UTR CG1090 + chr3R 4370962 intergenic not near genes chr3R 4375186 5` UTR CR44922 + chr3R_7_4370001 chr3R_4370001 Sg4 1713 chr3R 4408390 4408435 chr3R 4412719 4412764 Juan 14 4329 6.5 5.0 5.8 2.1 4374 chr3R 4408390 intron CG32944 - chr3R 4410577 intron CG32944 - chr3R 4412764 intron CG32944 - chr3R_14_4410001 chr3R_4410001 Sg4 1714 chr3R 4510129 4510172 chr3R 4512207 4512250 4 2078 14.0 17.5 15.8 0.2 2121 chr3R 4510129 intron CG34357 - chr3R 4511190 intron CG34357 - chr3R 4512250 intron CG34357 - chr3R_4_4510001 chr3R_4510001 Sg4 1715 chr3R 4598594 4598638 chr3R 4598704 4598748 10 110 3.0 2.5 2.8 2.6 154 chr3R 4598594 intron CR44317 - chr3R 4598671 intron CR44317 - chr3R 4598748 intron CR44317 - chr3R_10_4595001 chr3R_4595001 Sg4 1716 chr3R 4625688 4625711 chr3R 4625767 4625821 14 96 2.0 4.5 3.2 3.3 133 chr3R 4625688 intron 5-HT2A + chr3R 4625754 intron 5-HT2A + chr3R 4625821 intron 5-HT2A + chr3R_14_4625001 chr3R_4625001 Sg4 1717 chr3R 4657257 4657272 chr3R 4657586 4657601 5 329 3.0 3.5 3.2 1.2 344 chr3R 4657257 intron spartin + chr3R 4657429 intron spartin + chr3R 4657601 exon spartin + chr3R_5_4655001 chr3R_4655001 Sg4 1718 chr3R 4680685 4680739 chr3R 4680789 4680843 19 104 4.0 2.0 3.0 4.8 158 chr3R 4680685 intron CG43427 + chr3R 4680764 intron CG43427 + chr3R 4680843 intron CG43427 + chr3R_19_4680001 chr3R_4680001 Sg4 1719 chr3R 4697030 4697085 chr3R 4697142 4697197 24 112 6.5 7.5 7.0 3.0 167 chr3R 4697030 intron CG43427 + chr3R 4697114 intron CG43427 + chr3R 4697197 5` UTR CG43427 + chr3R_24_4695001 chr3R_4695001 Sg4 1720 chr3R 4733650 4733703 chr3R 4733799 4733852 12 149 3.0 2.5 2.8 3.2 202 chr3R 4733650 intergenic not near genes chr3R 4733751 intergenic not near genes chr3R 4733852 intergenic not near genes chr3R_12_4730001 chr3R_4730001 Sg4 1721 chr3R 4753225 4753260 chr3R 4757553 4757587 F-element 18 4327 7.0 10.5 8.8 1.8 4362 chr3R 4753225 intron,intron atms +,CG44098 - chr3R 4755406 intron,intron atms +,CG44098 - chr3R 4757587 intron,exon atms +,CG44098 - chr3R_18_4755001 chr3R_4755001 Sg4 1722 chr3R 4796091 4796142 chr3R 4796239 4796290 20 148 5.0 4.0 4.5 3.6 199 chr3R 4796091 intron ctrip - chr3R 4796190 intron ctrip - chr3R 4796290 intron ctrip - chr3R_20_4795001 chr3R_4795001 Sg4 1723 chr3R 4861540 4861598 chr3R 4861646 4861665 22 97 7.5 4.0 5.8 3.2 125 chr3R 4861540 intron opa + chr3R 4861602 intron opa + chr3R 4861665 intron opa + chr3R_22_4860001 chr3R_4860001 Sg4 1724 chr3R 4887456 4887508 chr3R 4894858 4894910 rover 19 7401 1.5 5.5 3.5 4.2 7454 chr3R 4887456 intergenic not near genes chr3R 4891183 intergenic not near genes chr3R 4894910 intergenic not near genes chr3R_19_4890001 chr3R_4890001 Sg4 1725 chr3R 4922318 4922362 chr3R 4922422 4922466 11 104 2.5 5.5 4.0 2.2 148 chr3R 4922318 intron Cdep + chr3R 4922392 intron Cdep + chr3R 4922466 intron Cdep + chr3R_11_4920001 chr3R_4920001 Sg4 1726 chr3R 4943591 4943621 chr3R 4943721 4943751 9 130 5.0 3.0 4.0 1.8 160 chr3R 4943591 intron Cdep + chr3R 4943671 intron Cdep + chr3R 4943751 intron Cdep + chr3R_9_4940001 chr3R_4940001 Sg4 1727 chr3R 4948362 4948389 chr3R 4949009 4949036 7 647 12.5 13.5 13.0 0.5 674 chr3R 4948362 intergenic snRNA:U1:82Eb -,UbcD6 - chr3R 4948699 intergenic UbcD6 - chr3R 4949036 3` UTR UbcD6 - chr3R_7_4945001 chr3R_4945001 Sg4 1728 chr3R 4965992 4966029 chr3R 4966109 4966146 9 117 0.5 2.0 1.2 4.1 154 chr3R 4965992 intron CG1124 + chr3R 4966069 intron CG1124 + chr3R 4966146 intron CG1124 + chr3R_9_4965001 chr3R_4965001 Sg4 1729 chr3R 4969785 4969828 chr3R 4969894 4969937 7 109 0.5 2.5 1.5 2.8 152 chr3R 4969785 intergenic not near genes chr3R 4969861 intergenic not near genes chr3R 4969937 intergenic not near genes chr3R_7_4965001 chr3R_4965001 Sg4 1730 chr3R 4981401 4981445 chr3R 4981489 4981539 6 92 6.0 4.5 5.2 1.0 138 chr3R 4981401 intergenic not near genes chr3R 4981470 intergenic not near genes chr3R 4981539 intergenic CG14662 - chr3R_6_4980001 chr3R_4980001 Sg4 1731 chr3R 4984277 4984328 chr3R 4984394 4984445 9 117 3.5 2.0 2.8 2.4 168 chr3R 4984277 intergenic CG14662 -,CR43424 -,CR43478 + chr3R 4984361 intergenic CG14662 -,CR43424 -,CR43478 + chr3R 4984445 intergenic CR43424 -,CG14662 - chr3R_9_4980001 chr3R_4980001 Sg4 1732 chr3R 4999916 4999948 chr3R 5000102 5000134 9 186 3.0 3.5 3.2 2.1 218 chr3R 4999916 intron CG2022 - chr3R 5000025 intron CG2022 - chr3R 5000134 intron CG2022 - chr3R_9_5000001 chr3R_5000001 Sg4 1733 chr3R 5045822 5045867 chr3R 5052949 5052994 HMS-Beagle 16 7127 4.5 3.0 3.8 3.3 7172 chr3R 5045822 3` UTR CR43635 - chr3R 5049408 intergenic not near genes chr3R 5052994 intergenic CR45588 - chr3R_16_5045001 chr3R_5045001 Sg4 1734 chr3R 5067959 5068013 chr3R 5073501 5073555 mdg3 15 5542 2.5 6.5 4.5 2.7 5596 chr3R 5067959 intergenic not near genes chr3R 5070757 intergenic not near genes chr3R 5073555 intergenic not near genes chr3R_15_5070001 chr3R_5070001 Sg4 1735 chr3R 5158121 5158174 chr3R 5158237 5158292 14 114 3.0 5.0 4.0 2.8 171 chr3R 5158121 intron dpr16 + chr3R 5158206 intron dpr16 + chr3R 5158292 intron dpr16 + chr3R_14_5155001 chr3R_5155001 Sg4 1736 chr3R 5191369 5191410 chr3R 5191630 5191661 10 256 31.0 26.5 28.8 0.3 292 chr3R 5191369 intron cno - chr3R 5191515 intron cno - chr3R 5191661 intron cno - chr3R_10_5190001 chr3R_5190001 Sg4 1737 chr3R 5191366 5191422 chr3R 5191663 5191673 4 262 33.0 25.5 29.2 0.1 307 chr3R 5191366 intron cno - chr3R 5191520 intron cno - chr3R 5191673 intron cno - chr3R_4_5190001 chr3R_5190001 Sg4 1738 chr3R 5205120 5205136 chr3R 5205237 5205253 6 117 4.5 3.0 3.8 1.2 133 chr3R 5205120 intron cno - chr3R 5205186 intron cno - chr3R 5205253 intron cno - chr3R_6_5205001 chr3R_5205001 Sg4 1739 chr3R 5385950 5386004 chr3R 5386146 5386200 17 191 2.0 4.0 3.0 4.2 250 chr3R 5385950 intron kkv - chr3R 5386075 intron kkv - chr3R 5386200 intron kkv - chr3R_17_5385001 chr3R_5385001 Sg4 1740 chr3R 5418083 5418143 chr3R 5418381 5418441 24 298 3.5 3.5 3.5 5.3 358 chr3R 5418083 intron CG14669 + chr3R 5418262 intron CG14669 + chr3R 5418441 intron CG14669 + chr3R_24_5415001 chr3R_5415001 Sg4 1741 chr3R 5437945 5437990 chr3R 5438080 5438125 13 135 3.5 4.5 4.0 2.6 180 chr3R 5437945 intron CG14669 + chr3R 5438035 intron CG14669 + chr3R 5438125 intron CG14669 + chr3R_13_5435001 chr3R_5435001 Sg4 1742 chr3R 5445935 5445985 chr3R 5452420 5452470 Burdock 10 6485 4.5 4.5 4.5 1.8 6535 chr3R 5445935 intron CG14669 + chr3R 5449202 intron CG14669 + chr3R 5452470 intron CG14669 + chr3R_10_5445001 chr3R_5445001 Sg4 1743 chr3R 5497052 5497060 chr3R 5497896 5497906 4 845 37.5 45.0 41.2 0.1 854 chr3R 5497052 intron CG31547 - chr3R 5497479 intron CG31547 - chr3R 5497906 intron CG31547 - chr3R_4_5495001 chr3R_5495001 Sg4 1744 chr3R 5497045 5497073 chr3R 5497917 5497927 6 854 35.5 38.5 37.0 0.2 882 chr3R 5497045 intron CG31547 - chr3R 5497486 intron CG31547 - chr3R 5497927 intron CG31547 - chr3R_6_5495001 chr3R_5495001 Sg4 1745 chr3R 5502607 5502616 chr3R 5502701 5502720 6 102 3.5 12.5 8.0 0.7 113 chr3R 5502607 5` UTR CG31547 - chr3R 5502664 5` UTR CG31547 - chr3R 5502720 intergenic CG31547 - chr3R_6_5500001 chr3R_5500001 Sg4 1746 chr3R 5515121 5515160 chr3R 5515218 5515253 10 101 4.5 3.5 4.0 2.0 132 chr3R 5515121 intron Nmdar1 - chr3R 5515187 intron Nmdar1 - chr3R 5515253 intron Nmdar1 - chr3R_10_5515001 chr3R_5515001 Sg4 1747 chr3R 5712060 5712104 chr3R 5712173 5712217 18 112 7.0 1.0 4.0 3.6 157 chr3R 5712060 3` UTR plx + chr3R 5712138 3` UTR plx + chr3R 5712217 3` UTR plx + chr3R_18_5710001 chr3R_5710001 Sg4 1748 chr3R 5726068 5726119 chr3R 5726255 5726306 16 187 1.5 2.5 2.0 5.3 238 chr3R 5726068 intergenic not near genes chr3R 5726187 intergenic not near genes chr3R 5726306 intergenic not near genes chr3R_16_5725001 chr3R_5725001 Sg4 1749 chr3R 5737763 5737801 chr3R 5738005 5738043 5 241 13.0 13.5 13.2 0.4 280 chr3R 5737763 exon CG1236 + chr3R 5737903 exon CG1236 + chr3R 5738043 intergenic CG1236 +,Sym - chr3R_5_5735001 chr3R_5735001 Sg4 1750 chr3R 5746001 5746037 chr3R 5746267 5746303 pogo 13 266 3.5 4.0 3.8 2.7 302 chr3R 5746001 3` UTR Madm + chr3R 5746152 3` UTR Madm + chr3R 5746303 3` UTR Madm + chr3R_13_5745001 chr3R_5745001 Sg4 1751 chr3R 5746997 5747045 chr3R 5753213 5753256 diver 4 6215 3.5 4.0 3.8 0.8 6259 chr3R 5746997 intergenic Madm + chr3R 5750126 intergenic not near genes chr3R 5753256 intergenic CG2091 - chr3R_4_5750001 chr3R_5750001 Sg4 1752 chr3R 5772353 5772408 chr3R 5772536 5772591 22 182 2.0 5.5 3.8 4.6 238 chr3R 5772353 intron CG2082 - chr3R 5772472 intron CG2082 - chr3R 5772591 intron CG2082 - chr3R_22_5770001 chr3R_5770001 Sg4 1753 chr3R 5809098 5809136 chr3R 5809353 5809402 pogo 16 264 4.5 3.5 4.0 3.2 304 chr3R 5809098 3` UTR CG11000 + chr3R 5809250 3` UTR CG11000 + chr3R 5809402 3` UTR CG11000 + chr3R_16_5805001 chr3R_5805001 Sg4 1754 chr3R 5813211 5813253 chr3R 5813340 5813382 4 126 19.0 18.0 18.5 0.2 171 chr3R 5813211 3` UTR CG11000 + chr3R 5813296 intergenic CG11000 +,CG42675 + chr3R 5813382 intergenic CG11000 +,CG42675 + chr3R_4_5810001 chr3R_5810001 Sg4 1755 chr3R 5846431 5846462 chr3R 5849880 5849936 14 3452 21.0 35.0 28.0 0.5 3505 chr3R 5846431 3` UTR CG1213 + chr3R 5848184 intergenic CG14676 + chr3R 5849936 3` UTR disp - chr3R_14_5845001 chr3R_5845001 Sg4 1756 chr3R 5927562 5927578 chr3R 5927800 5927822 pogo 6 257 5.5 5.5 5.5 0.9 260 chr3R 5927562 intron CG34113 - chr3R 5927692 intron CG34113 - chr3R 5927822 intron CG34113 - chr3R_6_5925001 chr3R_5925001 Sg4 1757 chr3R 5943379 5943417 chr3R 5943483 5943521 7 103 0.5 3.0 1.8 2.5 142 chr3R 5943379 intron CG34113 - chr3R 5943450 intron CG34113 - chr3R 5943521 intron CG34113 - chr3R_7_5940001 chr3R_5940001 Sg4 1758 chr3R 5947952 5947996 chr3R 5948057 5948096 13 114 5.0 3.5 4.2 2.5 144 chr3R 5947952 intron CG34113 - chr3R 5948024 intron CG34113 - chr3R 5948096 intron CG34113 - chr3R_13_5945001 chr3R_5945001 Sg4 1759 chr3R 5956540 5956589 chr3R 5956643 5956692 8 101 3.0 4.0 3.5 1.8 152 chr3R 5956540 intron CG34113 - chr3R 5956616 intron CG34113 - chr3R 5956692 intron CG34113 - chr3R_8_5955001 chr3R_5955001 Sg4 1760 chr3R 5989316 5989366 chr3R 5989424 5989474 16 107 4.0 7.5 5.8 2.4 158 chr3R 5989316 5` UTR CR44927 + chr3R 5989395 5` UTR CR44927 + chr3R 5989474 5` UTR CR44927 + chr3R_16_5985001 chr3R_5985001 Sg4 1761 chr3R 6015956 6015991 chr3R 6024442 6024497 Tirant 10 8503 4.5 6.5 5.5 1.5 8541 chr3R 6015956 intergenic not near genes chr3R 6020226 intergenic not near genes chr3R 6024497 intergenic not near genes chr3R_10_6020001 chr3R_6020001 Sg4 1762 chr3R 6158493 6158536 chr3R 6167101 6167144 Tirant 8 8608 3.5 6.0 4.8 1.4 8651 chr3R 6158493 intergenic not near genes chr3R 6162818 intergenic not near genes chr3R 6167144 intergenic CG1077 + chr3R_8_6160001 chr3R_6160001 Sg4 1763 chr3R 6175147 6175206 chr3R 6182444 6182498 HMS-Beagle2 8 7292 2.0 2.5 2.2 2.5 7351 chr3R 6175147 intergenic Osi1 + chr3R 6178822 intron CR45194 + chr3R 6182498 intergenic CR45194 + chr3R_8_6175001 chr3R_6175001 Sg4 1764 chr3R 6191165 6191195 chr3R 6191255 6191300 8 103 3.5 0.5 2.0 2.7 135 chr3R 6191165 intron NPFR + chr3R 6191232 intron NPFR + chr3R 6191300 intron NPFR + chr3R_8_6190001 chr3R_6190001 Sg4 1765 chr3R 6206270 6206296 chr3R 6206507 6206538 BS 9 241 9.0 5.5 7.2 1.1 268 chr3R 6206270 exon Osi24 + chr3R 6206404 intron Osi24 + chr3R 6206538 intron Osi24 + chr3R_9_6205001 chr3R_6205001 Sg4 1766 chr3R 6367959 6367975 chr3R 6368211 6368238 4 255 15.0 11.5 13.2 0.3 279 chr3R 6367959 exon CG42724 - chr3R 6368098 5` UTR CG42724 - chr3R 6368238 5` UTR CG42724 - chr3R_4_6365001 chr3R_6365001 Sg4 1767 chr3R 6367977 6367994 chr3R 6368210 6368254 5 250 13.0 11.5 12.2 0.4 277 chr3R 6367977 exon CG42724 - chr3R 6368116 5` UTR CG42724 - chr3R 6368254 5` UTR CG42724 - chr3R_5_6365001 chr3R_6365001 Sg4 1768 chr3R 6428786 6428841 chr3R 6428913 6428968 7 127 1.5 1.5 1.5 2.8 182 chr3R 6428786 intron gpp + chr3R 6428877 intron gpp + chr3R 6428968 intron gpp + chr3R_7_6425001 chr3R_6425001 Sg4 1769 chr3R 6461579 6461606 chr3R 6461684 6461711 6 105 1.0 5.0 3.0 1.5 132 chr3R 6461579 intergenic not near genes chr3R 6461645 intergenic not near genes chr3R 6461711 intergenic not near genes chr3R_6_6460001 chr3R_6460001 Sg4 1770 chr3R 6499605 6499657 chr3R 6499710 6499761 13 104 2.0 5.5 3.8 2.7 156 chr3R 6499605 intergenic not near genes chr3R 6499683 intergenic not near genes chr3R 6499761 intergenic not near genes chr3R_13_6495001 chr3R_6495001 Sg4 1771 chr3R 6526322 6526377 chr3R 6526539 6526594 16 217 1.5 1.5 1.5 6.4 272 chr3R 6526322 intergenic not near genes chr3R 6526458 intergenic not near genes chr3R 6526594 intergenic not near genes chr3R_16_6525001 chr3R_6525001 Sg4 1772 chr3R 6536877 6536909 chr3R 6537214 6537246 4 336 8.5 10.0 9.2 0.4 369 chr3R 6536877 intron dpr11 - chr3R 6537062 intron dpr11 - chr3R 6537246 intron dpr11 - chr3R_4_6535001 chr3R_6535001 Sg4 1773 chr3R 6702008 6702041 chr3R 6705875 6705908 12 3867 43.5 22.0 32.8 0.4 3900 chr3R 6702008 3` UTR Ccp84Ab - chr3R 6703958 intergenic Ccp84Aa + chr3R 6705908 intergenic not near genes chr3R_12_6700001 chr3R_6700001 Sg4 1774 chr3R 6717701 6717706 chr3R 6717833 6717868 4 154 2.0 4.0 3.0 1.0 167 chr3R 6717701 intron pb - chr3R 6717784 intron pb - chr3R 6717868 intron pb - chr3R_4_6715001 chr3R_6715001 Sg4 1775 chr3R 6737482 6737523 chr3R 6739294 6739335 Doc 7 1809 5.0 6.5 5.8 1.0 1853 chr3R 6737482 intron pb - chr3R 6738408 intron pb - chr3R 6739335 intron pb - chr3R_7_6735001 chr3R_6735001 Sg4 1776 chr3R 6804172 6804226 chr3R 6804306 6804360 22 133 2.0 5.5 3.8 4.6 188 chr3R 6804172 intergenic not near genes chr3R 6804266 intergenic not near genes chr3R 6804360 intergenic not near genes chr3R_22_6800001 chr3R_6800001 Sg4 1777 chr3R 6891226 6891268 chr3R 6891312 6891338 7 80 6.0 5.5 5.8 1.0 112 chr3R 6891226 intergenic not near genes chr3R 6891282 intergenic not near genes chr3R 6891338 intergenic not near genes chr3R_7_6890001 chr3R_6890001 Sg4 1778 chr3R 6918042 6918092 chr3R 6918145 6918195 11 102 2.0 4.5 3.2 2.6 153 chr3R 6918042 intron Antp - chr3R 6918118 intron Antp - chr3R 6918195 intron Antp - chr3R_11_6915001 chr3R_6915001 Sg4 1779 chr3R 6978858 6978909 chr3R 6978968 6979019 8 109 4.0 2.5 3.2 1.9 161 chr3R 6978858 intron Antp - chr3R 6978938 intron Antp - chr3R 6979019 intron Antp - chr3R_8_6975001 chr3R_6975001 Sg4 1780 chr3R 7012728 7012782 chr3R 7012840 7012894 10 112 4.0 0.5 2.2 3.1 166 chr3R 7012728 intergenic not near genes chr3R 7012811 intergenic not near genes chr3R 7012894 intergenic not near genes chr3R_10_7010001 chr3R_7010001 Sg4 1781 chr3R 7103261 7103310 chr3R 7103362 7103410 14 100 2.0 6.5 4.2 2.7 149 chr3R 7103261 intron Alh - chr3R 7103336 intron Alh - chr3R 7103410 intron Alh - chr3R_14_7100001 chr3R_7100001 Sg4 1782 chr3R 7106506 7106535 chr3R 7106612 7106641 6 106 2.0 4.0 3.0 1.5 135 chr3R 7106506 intron Alh - chr3R 7106574 intron Alh - chr3R 7106641 intron Alh - chr3R_6_7105001 chr3R_7105001 Sg4 1783 chr3R 7106741 7106791 chr3R 7107059 7107109 10 317 4.0 5.5 4.8 1.7 368 chr3R 7106741 intron Alh - chr3R 7106925 intron Alh - chr3R 7107109 intron Alh - chr3R_10_7105001 chr3R_7105001 Sg4 1784 chr3R 7126484 7126513 chr3R 7126604 7126633 4 120 2.0 3.0 2.5 1.1 149 chr3R 7126484 3` UTR,3` UTR CG10098 +,CG10068 - chr3R 7126558 3` UTR CG10068 - chr3R 7126633 3` UTR CG10068 - chr3R_4_7125001 chr3R_7125001 Sg4 1785 chr3R 7173655 7173708 chr3R 7173760 7173813 15 104 0.5 1.5 1.0 7.5 158 chr3R 7173655 intron sas + chr3R 7173734 intron sas + chr3R 7173813 intron sas + chr3R_15_7170001 chr3R_7170001 Sg4 1786 chr3R 7210573 7210618 chr3R 7210675 7210729 4 109 0.0 2.0 1.0 2.0 156 chr3R 7210573 intergenic not near genes chr3R 7210651 intergenic not near genes chr3R 7210729 intergenic not near genes chr3R_4_7210001 chr3R_7210001 Sg4 1787 chr3R 7217443 7217463 chr3R 7217689 7217709 6 246 4.5 5.5 5.0 1.0 266 chr3R 7217443 intergenic CG14605 -,CG14606 - chr3R 7217576 intergenic CG14605 -,CG14606 - chr3R 7217709 3` UTR CG14605 - chr3R_6_7215001 chr3R_7215001 Sg4 1788 chr3R 7377319 7377376 chr3R 7377517 7377574 18 198 2.5 2.5 2.5 5.1 255 chr3R 7377319 intergenic not near genes chr3R 7377446 intergenic not near genes chr3R 7377574 intergenic not near genes chr3R_18_7375001 chr3R_7375001 Sg4 1789 chr3R 7412657 7412703 chr3R 7413180 7413226 17 520 3.0 4.5 3.8 3.5 569 chr3R 7412657 intergenic not near genes chr3R 7412942 intergenic not near genes chr3R 7413226 intergenic not near genes chr3R_17_7410001 chr3R_7410001 Sg4 1790 chr3R 7425561 7425615 chr3R 7425683 7425737 12 122 5.0 7.5 6.2 1.7 176 chr3R 7425561 intergenic not near genes chr3R 7425649 intergenic not near genes chr3R 7425737 intergenic not near genes chr3R_12_7425001 chr3R_7425001 Sg4 1791 chr3R 7446311 7446369 chr3R 7446719 7446777 18 408 1.0 1.5 1.2 8.2 466 chr3R 7446311 intergenic not near genes chr3R 7446544 intergenic not near genes chr3R 7446777 intergenic not near genes chr3R_18_7445001 chr3R_7445001 Sg4 1792 chr3R 7447983 7448011 chr3R 7448086 7448114 4 103 3.5 4.5 4.0 0.8 131 chr3R 7447983 intergenic not near genes chr3R 7448048 intergenic not near genes chr3R 7448114 intergenic not near genes chr3R_4_7445001 chr3R_7445001 Sg4 1793 chr3R 7479991 7480043 chr3R 7480095 7480137 8 103 1.0 3.5 2.2 2.5 146 chr3R 7479991 intergenic not near genes chr3R 7480064 intergenic not near genes chr3R 7480137 intergenic not near genes chr3R_8_7480001 chr3R_7480001 Sg4 1794 chr3R 7545674 7545731 chr3R 7545922 7545979 16 247 1.0 0.5 0.8 8.9 305 chr3R 7545674 intergenic alpha-Est1 -,alpha-Est2 + chr3R 7545826 3` UTR alpha-Est1 - chr3R 7545979 exon alpha-Est1 - chr3R_16_7545001 chr3R_7545001 Sg4 1795 chr3R 7577429 7577482 chr3R 7577533 7577589 20 106 5.5 3.5 4.5 3.6 160 chr3R 7577429 intron CG34127 - chr3R 7577509 intron CG34127 - chr3R 7577589 intron CG34127 - chr3R_20_7575001 chr3R_7575001 Sg4 1796 chr3R 7581565 7581611 chr3R 7581672 7581679 10 92 3.5 3.5 3.5 2.2 114 chr3R 7581565 intron CG34127 - chr3R 7581622 intron CG34127 - chr3R 7581679 intron CG34127 - chr3R_10_7580001 chr3R_7580001 Sg4 1797 chr3R 7617970 7618018 chr3R 7618087 7618135 14 116 1.0 3.5 2.2 4.4 165 chr3R 7617970 intron CG34127 - chr3R 7618052 intron CG34127 - chr3R 7618135 intron CG34127 - chr3R_14_7615001 chr3R_7615001 Sg4 1798 chr3R 7621526 7621560 chr3R 7621642 7621675 6 116 2.5 5.0 3.8 1.2 149 chr3R 7621526 intron CG34127 - chr3R 7621600 intron CG34127 - chr3R 7621675 intron CG34127 - chr3R_6_7620001 chr3R_7620001 Sg4 1799 chr3R 7658449 7658494 chr3R 7658561 7658606 8 112 4.0 7.5 5.8 1.2 157 chr3R 7658449 intron Nlg1 + chr3R 7658528 intron Nlg1 + chr3R 7658606 intron Nlg1 + chr3R_8_7655001 chr3R_7655001 Sg4 1800 chr3R 7694557 7694609 chr3R 7713643 7713695 invader3 12 19086 4.5 2.5 3.5 2.7 19138 chr3R 7694557 3` UTR Nlg1 + chr3R 7704126 intergenic not near genes chr3R 7713695 intergenic not near genes chr3R_12_7700001 chr3R_7700001 Sg4 1801 chr3R 7729443 7729493 chr3R 7737406 7737456 Stalker2 19 7960 2.5 4.5 3.5 4.2 8013 chr3R 7729443 intergenic not near genes chr3R 7733450 intergenic not near genes chr3R 7737456 intergenic not near genes chr3R_19_7730001 chr3R_7730001 Sg4 1802 chr3R 7751356 7751383 chr3R 7751457 7751484 14 101 6.5 6.0 6.2 1.9 128 chr3R 7751356 intergenic not near genes chr3R 7751420 intergenic not near genes chr3R 7751484 intergenic not near genes chr3R_14_7750001 chr3R_7750001 Sg4 1803 chr3R 7759998 7760036 chr3R 7760099 7760137 12 101 2.0 6.0 4.0 2.4 139 chr3R 7759998 intron Sp7 + chr3R 7760068 intron Sp7 + chr3R 7760137 intron Sp7 + chr3R_12_7760001 chr3R_7760001 Sg4 1804 chr3R 7857619 7857672 chr3R 7857727 7857780 14 108 3.5 2.0 2.8 3.7 161 chr3R 7857619 3` UTR CG17816 - chr3R 7857700 3` UTR CG17816 - chr3R 7857780 3` UTR CG17816 - chr3R_14_7855001 chr3R_7855001 Sg4 1805 chr3R 7886067 7886124 chr3R 7886395 7886452 10 322 9.5 8.0 8.8 1.0 385 chr3R 7886067 5` UTR CG17816 - chr3R 7886260 intron CG17816 - chr3R 7886452 intron CG17816 - chr3R_10_7885001 chr3R_7885001 Sg4 1806 chr3R 8090541 8090560 chr3R 8094043 8094061 297 5 3502 3.5 13.5 8.5 0.5 3520 chr3R 8090541 intergenic CR44330 + chr3R 8092301 intergenic not near genes chr3R 8094061 intergenic CG7900 + chr3R_5_8090001 chr3R_8090001 Sg4 1807 chr3R 8094393 8094436 chr3R 8099723 8099766 Transpac 16 5330 4.0 3.5 3.8 3.3 5373 chr3R 8094393 intron CG7900 + chr3R 8097080 intron CG7900 + chr3R 8099766 intron CG7900 + chr3R_16_8095001 chr3R_8095001 Sg4 1808 chr3R 8101738 8101772 chr3R 8104847 8104881 G2 6 3108 6.5 7.5 7.0 0.8 3143 chr3R 8101738 exon CG7900 + chr3R 8103310 intron CG7900 + chr3R 8104881 3` UTR CG7900 + chr3R_6_8100001 chr3R_8100001 Sg4 1809 chr3R 8107367 8107406 chr3R 8107526 8107565 11 159 4.0 4.5 4.2 2.1 198 chr3R 8107367 intron puc + chr3R 8107466 intron puc + chr3R 8107565 intron puc + chr3R_11_8105001 chr3R_8105001 Sg4 1810 chr3R 8154265 8154284 chr3R 8154370 8154394 12 109 3.0 3.0 3.0 3.0 129 chr3R 8154265 intron grn - chr3R 8154330 intron grn - chr3R 8154394 intron grn - chr3R_12_8150001 chr3R_8150001 Sg4 1811 chr3R 8207552 8207587 chr3R 8208404 8208413 F-element 13 864 5.5 0.5 3.0 3.2 861 chr3R 8207552 intergenic not near genes chr3R 8207982 intergenic not near genes chr3R 8208413 intergenic not near genes chr3R_13_8205001 chr3R_8205001 Sg4 1812 chr3R 8212986 8213037 chr3R 8213094 8213145 8 107 5.0 2.5 3.8 1.7 159 chr3R 8212986 intergenic not near genes chr3R 8213066 intergenic not near genes chr3R 8213145 intergenic not near genes chr3R_8_8210001 chr3R_8210001 Sg4 1813 chr3R 8273711 8273763 chr3R 8273823 8273875 10 111 3.0 2.5 2.8 2.6 164 chr3R 8273711 intergenic not near genes chr3R 8273793 intergenic not near genes chr3R 8273875 intergenic not near genes chr3R_10_8270001 chr3R_8270001 Sg4 1814 chr3R 8339246 8339247 chr3R 21907534 21907536 17 13568289 21.0 20.0 20.5 0.8 13568290 chr3R 8339246 intergenic not near genes chr3R 15123391 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_17_15120001 chr3R_15120001 Sg4 1815 chr3R 8402993 8403039 chr3R 8412174 8412230 roo 15 9183 6.5 7.0 6.8 1.9 9237 chr3R 8402993 intron CG45263 - chr3R 8407612 intron CG45263 - chr3R 8412230 intron CG45263 - chr3R_15_8405001 chr3R_8405001 Sg4 1816 chr3R 8469551 8469575 chr3R 8469645 8469675 5 97 5.5 18.0 11.8 0.4 124 chr3R 8469551 intron CG45263 - chr3R 8469613 intron CG45263 - chr3R 8469675 intron CG45263 - chr3R_5_8465001 chr3R_8465001 Sg4 1817 chr3R 8491121 8491138 chr3R 8491241 8491258 6 118 8.0 5.0 6.5 0.8 137 chr3R 8491121 intergenic not near genes chr3R 8491190 intergenic not near genes chr3R 8491258 intergenic not near genes chr3R_6_8490001 chr3R_8490001 Sg4 1818 chr3R 8570456 8570507 chr3R 8575116 8575168 HMS-Beagle 17 4659 5.5 3.5 4.5 3.1 4712 chr3R 8570456 intergenic not near genes chr3R 8572812 intergenic not near genes chr3R 8575168 intergenic not near genes chr3R_17_8570001 chr3R_8570001 Sg4 1819 chr3R 8601751 8601800 chr3R 8610929 8610952 roo 9 9174 3.5 3.5 3.5 2.0 9201 chr3R 8601751 intron 5-HT2B + chr3R 8606352 intron 5-HT2B + chr3R 8610952 intron 5-HT2B + chr3R_9_8605001 chr3R_8605001 Sg4 1820 chr3R 8630877 8630933 chr3R 8631008 8631064 13 130 4.5 2.5 3.5 2.9 187 chr3R 8630877 intergenic not near genes chr3R 8630970 intergenic not near genes chr3R 8631064 intergenic not near genes chr3R_13_8630001 chr3R_8630001 Sg4 1821 chr3R 8636908 8636965 chr3R 8637236 8637288 13 327 2.0 5.0 3.5 2.9 380 chr3R 8636908 intergenic not near genes chr3R 8637098 intergenic not near genes chr3R 8637288 intergenic not near genes chr3R_13_8635001 chr3R_8635001 Sg4 1822 chr3R 8639682 8639716 chr3R 8639789 8639823 12 107 3.0 4.5 3.8 2.5 141 chr3R 8639682 intergenic not near genes chr3R 8639752 intergenic not near genes chr3R 8639823 intergenic not near genes chr3R_12_8635001 chr3R_8635001 Sg4 1823 chr3R 8685274 8685313 chr3R 8685399 8685438 9 125 1.5 3.0 2.2 2.8 164 chr3R 8685274 intron CR44937 - chr3R 8685356 intron CR44937 - chr3R 8685438 intron CR44937 - chr3R_9_8685001 chr3R_8685001 Sg4 1824 chr3R 8707333 8707382 chr3R 8709799 8709847 jockey 16 2465 4.5 1.5 3.0 4.0 2514 chr3R 8707333 intergenic not near genes chr3R 8708590 intergenic not near genes chr3R 8709847 intergenic not near genes chr3R_16_8705001 chr3R_8705001 Sg4 1825 chr3R 8813982 8814027 chr3R 8814876 8814922 4 895 19.5 8.5 14.0 0.3 940 chr3R 8813982 3` UTR CG9821 - chr3R 8814452 3` UTR CG9821 - chr3R 8814922 3` UTR CG9821 - chr3R_4_8810001 chr3R_8810001 Sg4 1826 chr3R 8827492 8827526 chr3R 8827593 8827627 11 101 3.5 4.5 4.0 2.2 135 chr3R 8827492 intergenic pyd -,CG8379 + chr3R 8827560 3` UTR pyd - chr3R 8827627 3` UTR pyd - chr3R_11_8825001 chr3R_8825001 Sg4 1827 chr3R 8894854 8894902 chr3R 8896035 8896082 1360 5 1181 2.5 5.0 3.8 1.0 1228 chr3R 8894854 intron pyd - chr3R 8895468 intron pyd - chr3R 8896082 intron pyd - chr3R_5_8895001 chr3R_8895001 Sg4 1828 chr3R 8898197 8898213 chr3R 8913802 8913818 297 6 15604 8.5 5.5 7.0 0.8 15621 chr3R 8898197 intron pyd - chr3R 8906008 intron pyd - chr3R 8913818 intron pyd - chr3R_6_8905001 chr3R_8905001 Sg4 1829 chr3R 8966638 8966682 chr3R 8966804 8966831 11 163 6.5 5.5 6.0 1.6 193 chr3R 8966638 intergenic not near genes chr3R 8966734 intergenic not near genes chr3R 8966831 intergenic not near genes chr3R_11_8965001 chr3R_8965001 Sg4 1830 chr3R 9036692 9036736 chr3R 9036813 9036857 6 119 2.5 3.0 2.8 1.6 165 chr3R 9036692 intron neur - chr3R 9036774 intron neur - chr3R 9036857 intron neur - chr3R_6_9035001 chr3R_9035001 Sg4 1831 chr3R 9066626 9066680 chr3R 9066755 9066809 11 129 3.5 2.5 3.0 2.8 183 chr3R 9066626 3` UTR pum - chr3R 9066718 3` UTR pum - chr3R 9066809 3` UTR pum - chr3R_11_9065001 chr3R_9065001 Sg4 1832 chr3R 9078766 9078806 chr3R 9078874 9078914 15 107 4.0 4.0 4.0 3.0 148 chr3R 9078766 intron pum - chr3R 9078840 intron pum - chr3R 9078914 intron pum - chr3R_15_9075001 chr3R_9075001 Sg4 1833 chr3R 9079562 9079576 chr3R 9079669 9079688 6 110 12.5 4.5 8.5 0.6 126 chr3R 9079562 intron pum - chr3R 9079625 intron pum - chr3R 9079688 intron pum - chr3R_6_9075001 chr3R_9075001 Sg4 1834 chr3R 9082027 9082073 chr3R 9082146 9082192 13 118 2.0 5.0 3.5 2.9 165 chr3R 9082027 intron pum - chr3R 9082110 intron pum - chr3R 9082192 intron pum - chr3R_13_9080001 chr3R_9080001 Sg4 1835 chr3R 9101818 9101868 chr3R 9101942 9101990 14 123 3.0 1.5 2.2 4.4 172 chr3R 9101818 intron pum - chr3R 9101904 intron pum - chr3R 9101990 intron pum - chr3R_14_9100001 chr3R_9100001 Sg4 1836 chr3R 9108839 9108872 chr3R 9108940 9108973 10 100 4.5 4.0 4.2 1.9 134 chr3R 9108839 intron pum - chr3R 9108906 intron pum - chr3R 9108973 intron pum - chr3R_10_9105001 chr3R_9105001 Sg4 1837 chr3R 9141114 9141164 chr3R 9141223 9141273 19 109 6.5 2.5 4.5 3.5 159 chr3R 9141114 intron pum - chr3R 9141194 intron pum - chr3R 9141273 intron pum - chr3R_19_9140001 chr3R_9140001 Sg4 1838 chr3R 9278763 9278796 chr3R 9284048 9284081 Rt1a 14 5285 7.5 7.0 7.2 1.7 5318 chr3R 9278763 intergenic not near genes chr3R 9281422 intergenic not near genes chr3R 9284081 intergenic not near genes chr3R_14_9280001 chr3R_9280001 Sg4 1839 chr3R 9319557 9319600 chr3R 9320016 9320060 jockey 14 460 4.0 4.5 4.2 2.7 503 chr3R 9319557 intron CG8861 - chr3R 9319808 intron CG8861 - chr3R 9320060 intron CG8861 - chr3R_14_9315001 chr3R_9315001 Sg4 1840 chr3R 9361804 9361839 chr3R 9362070 9362105 pogo 8 266 4.5 5.0 4.8 1.4 301 chr3R 9361804 3` UTR CG45050 + chr3R 9361954 3` UTR CG45050 + chr3R 9362105 3` UTR CG45050 + chr3R_8_9360001 chr3R_9360001 Sg4 1841 chr3R 9382793 9382842 chr3R 9382943 9382992 12 148 5.0 3.5 4.2 2.3 199 chr3R 9382793 intron FER - chr3R 9382892 intron FER - chr3R 9382992 intron FER - chr3R_12_9380001 chr3R_9380001 Sg4 1842 chr3R 9601436 9601487 chr3R 9601579 9601624 14 142 3.0 2.5 2.8 3.7 188 chr3R 9601436 intron CG8312 + chr3R 9601530 intron CG8312 + chr3R 9601624 intron CG8312 + chr3R_14_9600001 chr3R_9600001 Sg4 1843 chr3R 9620956 9620956 chr3R 21907534 21907536 7 12286579 14.0 20.0 17.0 0.4 12286580 chr3R 9620956 intron CG8312 + chr3R 15764246 intergenic not near genes chr3R 21907536 intergenic CG6678 + chr3R_7_15760001 chr3R_15760001 Sg4 1844 chr3R 9644563 9644610 chr3R 9644669 9644716 13 106 2.5 2.5 2.5 3.7 153 chr3R 9644563 intron Dh44 + chr3R 9644640 intron Dh44 + chr3R 9644716 intron Dh44 + chr3R_13_9640001 chr3R_9640001 Sg4 1845 chr3R 9684088 9684143 chr3R 9684202 9684252 20 109 6.5 4.0 5.2 3.2 164 chr3R 9684088 5` UTR CG9444 - chr3R 9684170 5` UTR CG9444 - chr3R 9684252 5` UTR CG9444 - chr3R_20_9680001 chr3R_9680001 Sg4 1846 chr3R 9702238 9702292 chr3R 9702337 9702363 19 90 2.5 4.0 3.2 4.5 125 chr3R 9702238 intron Unc-115a - chr3R 9702300 intron Unc-115a - chr3R 9702363 intron Unc-115a - chr3R_19_9700001 chr3R_9700001 Sg4 1847 chr3R 9836847 9836896 chr3R 9836960 9837009 10 112 3.0 8.0 5.5 1.5 162 chr3R 9836847 intron Teh1 - chr3R 9836928 intron Teh1 - chr3R 9837009 intron Teh1 - chr3R_10_9835001 chr3R_9835001 Sg4 1848 chr3R 9926207 9926265 chr3R 9926316 9926374 25 102 2.5 5.0 3.8 5.2 167 chr3R 9926207 intron Glut4EF + chr3R 9926290 intron Glut4EF + chr3R 9926374 intron Glut4EF + chr3R_25_9925001 chr3R_9925001 Sg4 1849 chr3R 10045419 10045462 chr3R 10045578 10045611 6 154 12.5 22.5 17.5 0.3 192 chr3R 10045419 5` UTR CG11722 - chr3R 10045515 5` UTR CG11722 - chr3R 10045611 5` UTR mtTFB2 + chr3R_6_10045001 chr3R_10045001 Sg4 1850 chr3R 10067314 10067351 chr3R 10068144 10068181 8 830 2.0 2.0 2.0 2.7 867 chr3R 10067314 exon CG33783 + chr3R 10067748 intergenic CG33784 +,CG33783 + chr3R 10068181 intron CG33784 + chr3R_8_10065001 chr3R_10065001 Sg4 1851 chr3R 10090481 10090507 chr3R 10094054 10094080 4 3573 15.5 21.5 18.5 0.2 3599 chr3R 10090481 5` UTR CR45054 + chr3R 10092280 intergenic not near genes chr3R 10094080 5` UTR CR43459 + chr3R_4_10090001 chr3R_10090001 Sg4 1852 chr3R 10094326 10094373 chr3R 10094437 10094483 18 110 5.0 4.5 4.8 3.1 157 chr3R 10094326 5` UTR CR43459 + chr3R 10094404 5` UTR CR43459 + chr3R 10094483 5` UTR CR43459 + chr3R_18_10090001 chr3R_10090001 Sg4 1853 chr3R 10231759 10231811 chr3R 10237361 10237413 mdg3 12 5600 1.5 3.5 2.5 3.4 5654 chr3R 10231759 intron CG42795 + chr3R 10234586 intron CG42795 + chr3R 10237413 intron CG42795 + chr3R_12_10230001 chr3R_10230001 Sg4 1854 chr3R 10275556 10275582 chr3R 10275658 10275683 7 102 3.5 7.5 5.5 1.1 127 chr3R 10275556 intron CG43143 + chr3R 10275620 intron CG43143 + chr3R 10275683 intron CG43143 + chr3R_7_10275001 chr3R_10275001 Sg4 1855 chr3R 10351402 10351447 chr3R 10351506 10351551 10 104 1.0 5.0 3.0 2.5 149 chr3R 10351402 intron jumu + chr3R 10351476 intron jumu + chr3R 10351551 intron jumu + chr3R_10_10350001 chr3R_10350001 Sg4 1856 chr3R 10536619 10536658 chr3R 10536724 10536763 9 105 2.0 1.5 1.8 3.2 144 chr3R 10536619 intron hth - chr3R 10536691 intron hth - chr3R 10536763 intron hth - chr3R_9_10535001 chr3R_10535001 Sg4 1857 chr3R 10544017 10544042 chr3R 10544398 10544423 7 381 10.5 7.5 9.0 0.7 406 chr3R 10544017 intron hth - chr3R 10544220 intron hth - chr3R 10544423 intron hth - chr3R_7_10540001 chr3R_10540001 Sg4 1858 chr3R 10559761 10559809 chr3R 10559871 10559919 9 110 4.5 1.0 2.8 2.4 158 chr3R 10559761 intron hth - chr3R 10559840 intron hth - chr3R 10559919 intron hth - chr3R_9_10555001 chr3R_10555001 Sg4 1859 chr3R 10563110 10563155 chr3R 10563215 10563260 9 105 2.5 2.0 2.2 2.8 150 chr3R 10563110 intron hth - chr3R 10563185 intron hth - chr3R 10563260 intron hth - chr3R_9_10560001 chr3R_10560001 Sg4 1860 chr3R 10596615 10596638 chr3R 10596703 10596739 5 95 6.5 0.5 3.5 1.1 124 chr3R 10596615 intron hth - chr3R 10596677 intron hth - chr3R 10596739 intron hth - chr3R_5_10595001 chr3R_10595001 Sg4 1861 chr3R 10720540 10720587 chr3R 10720655 10720700 13 110 2.5 4.5 3.5 2.9 160 chr3R 10720540 intergenic not near genes chr3R 10720620 intergenic not near genes chr3R 10720700 intergenic not near genes chr3R_13_10720001 chr3R_10720001 Sg4 1862 chr3R 10722916 10722941 chr3R 10723177 10723182 8 257 3.0 2.5 2.8 2.1 266 chr3R 10722916 intergenic not near genes chr3R 10723049 intergenic not near genes chr3R 10723182 intergenic not near genes chr3R_8_10720001 chr3R_10720001 Sg4 1863 chr3R 10785798 10785828 chr3R 10785902 10785932 6 104 7.0 3.0 5.0 1.0 134 chr3R 10785798 intron Rbp1 + chr3R 10785865 intron Rbp1 + chr3R 10785932 intron Rbp1 + chr3R_6_10785001 chr3R_10785001 Sg4 1864 chr3R 10804149 10804198 chr3R 10811705 10811755 17.6 11 7557 2.5 4.5 3.5 2.4 7606 chr3R 10804149 intergenic CG14692 - chr3R 10807952 intergenic not near genes chr3R 10811755 3` UTR CG14693 - chr3R_11_10805001 chr3R_10805001 Sg4 1865 chr3R 10886855 10886896 chr3R 10886960 10887001 14 103 2.5 4.0 3.2 3.3 146 chr3R 10886855 intron Leash + chr3R 10886928 intron Leash + chr3R 10887001 intron Leash + chr3R_14_10885001 chr3R_10885001 Sg4 1866 chr3R 10919660 10919714 chr3R 10919763 10919817 10 103 5.0 3.5 4.2 1.9 157 chr3R 10919660 intergenic not near genes chr3R 10919738 intergenic not near genes chr3R 10919817 intergenic not near genes chr3R_10_10915001 chr3R_10915001 Sg4 1867 chr3R 10920022 10920077 chr3R 10920125 10920180 9 103 2.5 3.0 2.8 2.4 158 chr3R 10920022 intergenic not near genes chr3R 10920101 intergenic not near genes chr3R 10920180 intergenic not near genes chr3R_9_10920001 chr3R_10920001 Sg4 1868 chr3R 10944666 10944712 chr3R 10948480 10948526 10 3814 27.5 33.5 30.5 0.3 3860 chr3R 10944666 intergenic not near genes chr3R 10946596 intergenic not near genes chr3R 10948526 intergenic not near genes chr3R_10_10945001 chr3R_10945001 Sg4 1869 chr3R 10979647 10979657 chr3R 10979754 10979764 4 107 6.0 4.0 5.0 0.7 117 chr3R 10979647 intron CG34114 + chr3R 10979706 intron CG34114 + chr3R 10979764 intron CG34114 + chr3R_4_10975001 chr3R_10975001 Sg4 1870 chr3R 10979659 10979672 chr3R 10979753 10979779 6 105 4.5 4.0 4.2 1.2 120 chr3R 10979659 intron CG34114 + chr3R 10979719 intron CG34114 + chr3R 10979779 intron CG34114 + chr3R_6_10975001 chr3R_10975001 Sg4 1871 chr3R 10994259 10994307 chr3R 10994363 10994411 6 104 3.0 1.0 2.0 2.0 152 chr3R 10994259 intron CG34114 + chr3R 10994335 intron CG34114 + chr3R 10994411 intron CG34114 + chr3R_6_10990001 chr3R_10990001 Sg4 1872 chr3R 11104249 11104273 chr3R 11104353 11104377 6 104 3.0 0.0 1.5 2.4 128 chr3R 11104249 intergenic not near genes chr3R 11104313 intergenic not near genes chr3R 11104377 intergenic not near genes chr3R_6_11100001 chr3R_11100001 Sg4 1873 chr3R 11105792 11105834 chr3R 11105899 11105941 10 107 5.5 7.0 6.2 1.4 149 chr3R 11105792 intergenic not near genes chr3R 11105866 intergenic not near genes chr3R 11105941 intergenic not near genes chr3R_10_11105001 chr3R_11105001 Sg4 1874 chr3R 11242226 11242283 chr3R 11242340 11242397 11 114 1.5 4.0 2.8 2.9 171 chr3R 11242226 3` UTR CG17734 - chr3R 11242312 3` UTR CG17734 - chr3R 11242397 3` UTR CG17734 - chr3R_11_11240001 chr3R_11240001 Sg4 1875 chr3R 11265907 11265923 chr3R 11266016 11266032 6 106 6.5 12.5 9.5 0.6 125 chr3R 11265907 intergenic not near genes chr3R 11265970 intergenic not near genes chr3R 11266032 intergenic not near genes chr3R_6_11265001 chr3R_11265001 Sg4 1876 chr3R 11269435 11269470 chr3R 11269585 11269620 5 150 1.5 2.0 1.8 1.8 185 chr3R 11269435 3` UTR CR31386 - chr3R 11269528 3` UTR CR31386 - chr3R 11269620 3` UTR CR31386 - chr3R_5_11265001 chr3R_11265001 Sg4 1877 chr3R 11301120 11301138 chr3R 11301225 11301243 7 105 9.5 6.0 7.8 0.8 123 chr3R 11301120 intron CR31386 - chr3R 11301182 intron CR31386 - chr3R 11301243 intron CR31386 - chr3R_7_11300001 chr3R_11300001 Sg4 1878 chr3R 11325320 11325355 chr3R 11325440 11325475 11 118 4.5 1.5 3.0 2.8 155 chr3R 11325320 intergenic not near genes chr3R 11325398 intergenic not near genes chr3R 11325475 intergenic not near genes chr3R_11_11325001 chr3R_11325001 Sg4 1879 chr3R 11379216 11379257 chr3R 11388395 11388427 roo 4 9177 3.5 6.5 5.0 0.7 9211 chr3R 11379216 intron pros + chr3R 11383822 intron pros + chr3R 11388427 intron pros + chr3R_4_11380001 chr3R_11380001 Sg4 1880 chr3R 11408732 11408785 chr3R 11408851 11408893 22 115 2.5 5.5 4.0 4.4 161 chr3R 11408732 3` UTR mRpL40 + chr3R 11408812 3` UTR mgr - chr3R 11408893 3` UTR mgr - chr3R_22_11405001 chr3R_11405001 Sg4 1881 chr3R 11476928 11476971 chr3R 11477054 11477092 12 126 2.0 2.0 2.0 4.0 164 chr3R 11476928 intergenic not near genes chr3R 11477010 intergenic not near genes chr3R 11477092 intergenic not near genes chr3R_12_11475001 chr3R_11475001 Sg4 1882 chr3R 11546157 11546209 chr3R 11546258 11546310 13 101 2.5 2.5 2.5 3.7 153 chr3R 11546157 intergenic not near genes chr3R 11546234 intergenic not near genes chr3R 11546310 intergenic not near genes chr3R_13_11545001 chr3R_11545001 Sg4 1883 chr3R 11601249 11601272 chr3R 11601357 11601380 5 108 10.0 0.0 5.0 0.8 131 chr3R 11601249 intron Jupiter - chr3R 11601314 intron Jupiter - chr3R 11601380 intron Jupiter - chr3R_5_11600001 chr3R_11600001 Sg4 1884 chr3R 11664768 11664822 chr3R 11664885 11664939 10 116 2.5 4.0 3.2 2.4 171 chr3R 11664768 intron CG42327 + chr3R 11664854 intron CG42327 + chr3R 11664939 intron CG42327 + chr3R_10_11660001 chr3R_11660001 Sg4 1885 chr3R 11694706 11694742 chr3R 11694824 11694855 7 117 4.5 5.0 4.8 1.2 149 chr3R 11694706 intergenic Fer3 - chr3R 11694780 intergenic Fer3 - chr3R 11694855 intergenic not near genes chr3R_7_11690001 chr3R_11690001 Sg4 1886 chr3R 11734143 11734190 chr3R 11734287 11734334 14 143 2.5 5.5 4.0 2.8 191 chr3R 11734143 intergenic not near genes chr3R 11734238 intergenic not near genes chr3R 11734334 intergenic not near genes chr3R_14_11730001 chr3R_11730001 Sg4 1887 chr3R 11763932 11763941 chr3R 11764037 11764039 4 102 2.5 9.0 5.8 0.6 107 chr3R 11763932 5` UTR Lk6 - chr3R 11763986 5` UTR Lk6 - chr3R 11764039 5` UTR Lk6 - chr3R_4_11760001 chr3R_11760001 Sg4 1888 chr3R 11771336 11771383 chr3R 11773314 11773350 8 1976 15.0 11.0 13.0 0.6 2014 chr3R 11771336 intron l(3)neo38 - chr3R 11772343 intron l(3)neo38 - chr3R 11773350 intron l(3)neo38 - chr3R_8_11770001 chr3R_11770001 Sg4 1889 chr3R 11830336 11830356 chr3R 11830445 11830465 9 109 2.5 4.5 3.5 2.0 129 chr3R 11830336 intron CG6959 - chr3R 11830400 intron CG6959 - chr3R 11830465 intron CG6959 - chr3R_9_11830001 chr3R_11830001 Sg4 1890 chr3R 11841040 11841087 chr3R 11846256 11846303 BS 13 5216 7.5 6.5 7.0 1.6 5263 chr3R 11841040 intron CG6959 - chr3R 11843672 intron CG6959 - chr3R 11846303 intron CG6959 - chr3R_13_11840001 chr3R_11840001 Sg4 1891 chr3R 11853419 11853469 chr3R 11853587 11853641 10 173 0.0 4.5 2.2 3.1 222 chr3R 11853419 intron CG6959 - chr3R 11853530 intron CG6959 - chr3R 11853641 intron CG6959 - chr3R_10_11850001 chr3R_11850001 Sg4 1892 chr3R 11853746 11853794 chr3R 11853876 11853918 10 129 2.5 5.5 4.0 2.0 172 chr3R 11853746 intron CG6959 - chr3R 11853832 intron CG6959 - chr3R 11853918 intron CG6959 - chr3R_10_11850001 chr3R_11850001 Sg4 1893 chr3R 11903023 11903076 chr3R 11903222 11903275 8 198 10.0 14.0 12.0 0.6 252 chr3R 11903023 intron Cad87A - chr3R 11903149 intron Cad87A - chr3R 11903275 intron Cad87A - chr3R_8_11900001 chr3R_11900001 Sg4 1894 chr3R 11919279 11919336 chr3R 11919392 11919416 6 100 3.5 4.0 3.8 1.2 137 chr3R 11919279 intron Cad87A - chr3R 11919348 intron Cad87A - chr3R 11919416 intron Cad87A - chr3R_6_11915001 chr3R_11915001 Sg4 1895 chr3R 11951090 11951141 chr3R 11951220 11951272 15 129 6.5 7.0 6.8 1.9 182 chr3R 11951090 intron CG31211 + chr3R 11951181 intron CG31211 + chr3R 11951272 exon CG31211 + chr3R_15_11950001 chr3R_11950001 Sg4 1896 chr3R 11957845 11957860 chr3R 11958153 11958168 S-element 6 308 2.0 0.0 1.0 3.0 323 chr3R 11957845 intergenic not near genes chr3R 11958006 intergenic not near genes chr3R 11958168 intergenic not near genes chr3R_6_11955001 chr3R_11955001 Sg4 1897 chr3R 11982744 11982799 chr3R 11984095 11984134 10 1348 3.5 2.5 3.0 2.5 1390 chr3R 11982744 intergenic CG12224 -,CG3397 - chr3R 11983439 intron CG3397 - chr3R 11984134 exon CG3397 - chr3R_10_11980001 chr3R_11980001 Sg4 1898 chr3R 11998941 11998964 chr3R 11999081 11999104 8 140 2.0 4.5 3.2 1.9 163 chr3R 11998941 intron Tk - chr3R 11999022 intron Tk - chr3R 11999104 intron Tk - chr3R_8_11995001 chr3R_11995001 Sg4 1899 chr3R 12022877 12022912 chr3R 12025073 12025114 pogo 7 2201 0.5 6.0 3.2 1.7 2237 chr3R 12022877 intergenic not near genes chr3R 12023996 intergenic not near genes chr3R 12025114 intergenic not near genes chr3R_7_12020001 chr3R_12020001 Sg4 1900 chr3R 12032514 12032557 chr3R 12032623 12032666 16 109 4.0 9.5 6.8 2.1 152 chr3R 12032514 intergenic not near genes chr3R 12032590 intergenic not near genes chr3R 12032666 intergenic ssp5 + chr3R_16_12030001 chr3R_12030001 Sg4 1901 chr3R 12102847 12102885 chr3R 12102973 12103011 12 125 8.5 7.0 7.8 1.4 164 chr3R 12102847 intron dpr17 + chr3R 12102929 intron dpr17 + chr3R 12103011 intron dpr17 + chr3R_12_12100001 chr3R_12100001 Sg4 1902 chr3R 12202262 12202312 chr3R 12202396 12202446 11 128 6.5 2.5 4.5 2.0 184 chr3R 12202262 intergenic not near genes chr3R 12202354 intergenic not near genes chr3R 12202446 intergenic not near genes chr3R_11_12200001 chr3R_12200001 Sg4 1903 chr3R 12260509 12260563 chr3R 12261638 12261692 11 1128 2.5 4.0 3.2 2.6 1183 chr3R 12260509 intron,intron CG44037 +,svp + chr3R 12261100 intron,intron,exon CG44037 +,svp +,CG44038 + chr3R 12261692 intron,intron CG44037 +,svp + chr3R_11_12260001 chr3R_12260001 Sg4 1904 chr3R 12267834 12267888 chr3R 12267938 12267992 4 104 3.5 4.0 3.8 0.8 158 chr3R 12267834 intron svp + chr3R 12267913 intron svp + chr3R 12267992 intron svp + chr3R_4_12265001 chr3R_12265001 Sg4 1905 chr3R 12297626 12297645 chr3R 12297728 12297747 9 99 5.5 15.5 10.5 0.8 121 chr3R 12297626 intron svp + chr3R 12297686 intron svp + chr3R 12297747 intron svp + chr3R_9_12295001 chr3R_12295001 Sg4 1906 chr3R 12312636 12312685 chr3R 12312745 12312794 11 108 2.0 0.0 1.0 5.5 158 chr3R 12312636 exon CG4066 + chr3R 12312715 exon CG4066 + chr3R 12312794 exon CG4066 + chr3R_11_12310001 chr3R_12310001 Sg4 1907 chr3R 12344117 12344158 chr3R 12344219 12344260 8 101 3.5 4.0 3.8 1.7 143 chr3R 12344117 intergenic not near genes chr3R 12344188 intergenic not near genes chr3R 12344260 intergenic not near genes chr3R_8_12340001 chr3R_12340001 Sg4 1908 chr3R 12392865 12392895 chr3R 12392990 12393020 8 123 5.5 9.5 7.5 0.9 155 chr3R 12392865 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R 12392942 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R 12393020 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R_8_12390001 chr3R_12390001 Sg4 1909 chr3R 12429947 12429976 chr3R 12430106 12430134 10 159 6.5 8.0 7.2 1.2 187 chr3R 12429947 exon CG5245 + chr3R 12430040 exon CG5245 + chr3R 12430134 exon CG5245 + chr3R_10_12430001 chr3R_12430001 Sg4 1910 chr3R 12433678 12433711 chr3R 12433800 12433843 5 124 9.5 5.5 7.5 0.6 165 chr3R 12433678 exon Aos1 - chr3R 12433760 5` UTR Aos1 - chr3R 12433843 intergenic Aos1 -,CG5844 + chr3R_5_12430001 chr3R_12430001 Sg4 1911 chr3R 12569931 12569985 chr3R 12570037 12570073 9 97 3.0 3.0 3.0 2.2 142 chr3R 12569931 intron Octbeta2R - chr3R 12570002 intron Octbeta2R - chr3R 12570073 intron Octbeta2R - chr3R_9_12570001 chr3R_12570001 Sg4 1912 chr3R 12599355 12599393 chr3R 12599463 12599501 6 108 2.5 4.0 3.2 1.4 146 chr3R 12599355 intergenic not near genes chr3R 12599428 intergenic not near genes chr3R 12599501 intergenic not near genes chr3R_6_12595001 chr3R_12595001 Sg4 1913 chr3R 12733453 12733504 chr3R 12733555 12733606 12 100 4.5 3.5 4.0 2.4 153 chr3R 12733453 intergenic not near genes chr3R 12733530 intergenic not near genes chr3R 12733606 intergenic not near genes chr3R_12_12730001 chr3R_12730001 Sg4 1914 chr3R 12733831 12733884 chr3R 12733936 12733989 14 103 3.0 0.5 1.8 5.0 158 chr3R 12733831 intergenic not near genes chr3R 12733910 intergenic not near genes chr3R 12733989 intergenic not near genes chr3R_14_12730001 chr3R_12730001 Sg4 1915 chr3R 12753000 12753053 chr3R 12753110 12753163 8 110 3.5 2.0 2.8 2.1 163 chr3R 12753000 intron beat-Vc - chr3R 12753082 intron beat-Vc - chr3R 12753163 intron beat-Vc - chr3R_8_12750001 chr3R_12750001 Sg4 1916 chr3R 12786428 12786481 chr3R 12786813 12786864 6 383 1.0 2.5 1.8 2.1 436 chr3R 12786428 intergenic not near genes chr3R 12786646 intergenic not near genes chr3R 12786864 intergenic not near genes chr3R_6_12785001 chr3R_12785001 Sg4 1917 chr3R 12799016 12799055 chr3R 12799216 12799260 12 204 2.0 3.0 2.5 3.4 244 chr3R 12799016 intergenic not near genes chr3R 12799138 intergenic not near genes chr3R 12799260 intergenic not near genes chr3R_12_12795001 chr3R_12795001 Sg4 1918 chr3R 12825806 12825811 chr3R 12825911 12825916 4 105 13.0 5.0 9.0 0.4 110 chr3R 12825806 intergenic not near genes chr3R 12825861 intergenic not near genes chr3R 12825916 intergenic not near genes chr3R_4_12825001 chr3R_12825001 Sg4 1919 chr3R 12825812 12825853 chr3R 12825907 12825958 10 101 3.0 4.0 3.5 2.2 146 chr3R 12825812 intergenic not near genes chr3R 12825885 intergenic not near genes chr3R 12825958 intergenic not near genes chr3R_10_12825001 chr3R_12825001 Sg4 1920 chr3R 12864572 12864588 chr3R 12865082 12865098 roo 4 509 0.0 2.0 1.0 2.0 526 chr3R 12864572 intergenic not near genes chr3R 12864835 intergenic not near genes chr3R 12865098 intergenic not near genes chr3R_4_12860001 chr3R_12860001 Sg4 1921 chr3R 12883773 12883810 chr3R 12883912 12883914 7 131 5.0 1.0 3.0 1.8 141 chr3R 12883773 intergenic not near genes chr3R 12883844 intergenic not near genes chr3R 12883914 intergenic not near genes chr3R_7_12880001 chr3R_12880001 Sg4 1922 chr3R 12920137 12920181 chr3R 12925365 12925403 copia 12 5226 3.0 3.5 3.2 2.9 5266 chr3R 12920137 intron beat-Vb + chr3R 12922770 intron beat-Vb + chr3R 12925403 intron beat-Vb + chr3R_12_12920001 chr3R_12920001 Sg4 1923 chr3R 12926702 12926741 chr3R 12926838 12926877 7 136 0.5 3.5 2.0 2.3 175 chr3R 12926702 intron beat-Vb + chr3R 12926790 intron beat-Vb + chr3R 12926877 intron beat-Vb + chr3R_7_12925001 chr3R_12925001 Sg4 1924 chr3R 12972531 12972581 chr3R 12972695 12972745 10 164 1.0 3.5 2.2 3.1 214 chr3R 12972531 intron CG7381 - chr3R 12972638 intron CG7381 - chr3R 12972745 intron CG7381 - chr3R_10_12970001 chr3R_12970001 Sg4 1925 chr3R 13059940 13059958 chr3R 13060160 13060178 6 220 3.0 1.0 2.0 2.0 238 chr3R 13059940 intron sim + chr3R 13060059 intron sim + chr3R 13060178 intron sim + chr3R_6_13060001 chr3R_13060001 Sg4 1926 chr3R 13075339 13075368 chr3R 13075445 13075474 4 106 1.5 1.0 1.2 1.8 135 chr3R 13075339 intron sim + chr3R 13075406 intron sim + chr3R 13075474 intron sim + chr3R_4_13075001 chr3R_13075001 Sg4 1927 chr3R 13135807 13135850 chr3R 13138007 13138050 pogo 10 2199 3.5 2.5 3.0 2.5 2243 chr3R 13135807 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13136928 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138050 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_10_13135001 chr3R_13135001 Sg4 1928 chr3R 13143020 13143066 chr3R 13148611 13148657 mdg3 9 5597 3.5 4.5 4.0 1.8 5637 chr3R 13143020 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145838 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148657 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_9_13145001 chr3R_13145001 Sg4 1929 chr3R 13205383 13205436 chr3R 13205489 13205542 8 106 2.0 1.5 1.8 2.9 159 chr3R 13205383 intergenic not near genes chr3R 13205462 intergenic not near genes chr3R 13205542 intergenic not near genes chr3R_8_13205001 chr3R_13205001 Sg4 1930 chr3R 13314070 13314121 chr3R 13318884 13318934 Doc 4 4813 1.0 3.5 2.2 1.2 4864 chr3R 13314070 intergenic not near genes chr3R 13316502 intergenic not near genes chr3R 13318934 intergenic CG45080 - chr3R_4_13315001 chr3R_13315001 Sg4 1931 chr3R 13348990 13349035 chr3R 13349091 13349136 5 101 1.5 1.5 1.5 2.0 146 chr3R 13348990 intergenic not near genes chr3R 13349063 intergenic not near genes chr3R 13349136 intergenic not near genes chr3R_5_13345001 chr3R_13345001 Sg4 1932 chr3R 13372299 13372350 chr3R 13372484 13372535 11 182 3.0 3.5 3.2 2.6 236 chr3R 13372299 intergenic CG34309 +,Lip3 - chr3R 13372417 intergenic CG34309 + chr3R 13372535 intergenic CG34309 + chr3R_11_13370001 chr3R_13370001 Sg4 1933 chr3R 13464194 13464225 chr3R 13465360 13465391 4 1166 15.0 11.0 13.0 0.3 1197 chr3R 13464194 intron CR17025 - chr3R 13464792 intron CR17025 - chr3R 13465391 intron CR17025 - chr3R_4_13460001 chr3R_13460001 Sg4 1934 chr3R 13470832 13470877 chr3R 13471186 13471231 12 354 1.0 1.5 1.2 5.5 399 chr3R 13470832 intergenic not near genes chr3R 13471032 intergenic not near genes chr3R 13471231 intergenic not near genes chr3R_12_13470001 chr3R_13470001 Sg4 1935 chr3R 13517200 13517253 chr3R 13520042 13520085 jockey 4 2839 2.5 0.0 1.2 1.8 2885 chr3R 13517200 intergenic not near genes chr3R 13518642 intergenic not near genes chr3R 13520085 intergenic not near genes chr3R_4_13515001 chr3R_13515001 Sg4 1936 chr3R 13534358 13534413 chr3R 13534473 13534528 15 114 2.5 2.5 2.5 4.3 170 chr3R 13534358 intergenic not near genes chr3R 13534443 intergenic not near genes chr3R 13534528 intergenic not near genes chr3R_15_13530001 chr3R_13530001 Sg4 1937 chr3R 13571516 13571555 chr3R 13571618 13571657 4 102 0.5 2.5 1.5 1.6 141 chr3R 13571516 intergenic not near genes chr3R 13571586 intergenic not near genes chr3R 13571657 intergenic not near genes chr3R_4_13570001 chr3R_13570001 Sg4 1938 chr3R 13580823 13580827 chr3R 13580925 13580929 5 102 10.5 9.5 10.0 0.5 106 chr3R 13580823 intergenic not near genes chr3R 13580876 intergenic not near genes chr3R 13580929 intergenic not near genes chr3R_5_13580001 chr3R_13580001 Sg4 1939 chr3R 13598068 13598108 chr3R 13598171 13598191 10 100 3.5 3.5 3.5 2.2 123 chr3R 13598068 intergenic not near genes chr3R 13598130 intergenic not near genes chr3R 13598191 intergenic not near genes chr3R_10_13595001 chr3R_13595001 Sg4 1940 chr3R 13693028 13693028 chr3R 21907534 21907536 12 8214507 22.0 20.0 21.0 0.5 8214508 chr3R 13693028 3` UTR flfl + chr3R 17800282 exon CG17803 - chr3R 21907536 intergenic CG6678 + chr3R_12_17800001 chr3R_17800001 Sg4 1941 chr3R 13699315 13699350 chr3R 13699436 13699482 8 129 9.0 16.0 12.5 0.6 167 chr3R 13699315 5` UTR f-cup - chr3R 13699398 5` UTR f-cup - chr3R 13699482 intron f-cup - chr3R_8_13695001 chr3R_13695001 Sg4 1942 chr3R 13709774 13709788 chr3R 13709966 13710015 4 218 4.0 1.5 2.8 1.1 241 chr3R 13709774 exon CG31469 - chr3R 13709894 intron CG31469 - chr3R 13710015 intergenic primo-1 -,primo-2 -,CG31469 - chr3R_4_13705001 chr3R_13705001 Sg4 1943 chr3R 13835564 13835620 chr3R 13835681 13835737 10 115 1.5 4.0 2.8 2.6 173 chr3R 13835564 intron Nsf2 - chr3R 13835650 intron Nsf2 - chr3R 13835737 intron Nsf2 - chr3R_10_13835001 chr3R_13835001 Sg4 1944 chr3R 13863662 13863703 chr3R 13863775 13863816 11 113 2.5 2.0 2.2 3.4 154 chr3R 13863662 intergenic not near genes chr3R 13863739 intergenic not near genes chr3R 13863816 intergenic not near genes chr3R_11_13860001 chr3R_13860001 Sg4 1945 chr3R 14013038 14013051 chr3R 14074461 14074481 6 61424 25.5 14.5 20.0 0.3 61443 chr3R 14013038 intron rdx - chr3R 14043760 intergenic not near genes chr3R 14074481 intron foxo + chr3R_6_14040001 chr3R_14040001 Sg4 1946 chr3R 14194422 14194455 chr3R 14203576 14203629 roo 4 9169 4.0 2.0 3.0 1.0 9207 chr3R 14194422 intron Dop1R1 - chr3R 14199026 intron Dop1R1 - chr3R 14203629 intron Dop1R1 - chr3R_4_14195001 chr3R_14195001 Sg4 1947 chr3R 15094846 15094879 chr3R 15095149 15095182 6 303 13.0 10.0 11.5 0.5 336 chr3R 15094846 intron CG6966 - chr3R 15095014 5` UTR CG6966 - chr3R 15095182 5` UTR CG6966 - chr3R_6_15095001 chr3R_15095001 Sg4 1948 chr3R 15126448 15126478 chr3R 15126606 15126636 5 158 10.0 14.5 12.2 0.4 188 chr3R 15126448 intron CG42788 - chr3R 15126542 intron CG42788 - chr3R 15126636 intron CG42788 - chr3R_5_15125001 chr3R_15125001 Sg4 1949 chr3R 15162533 15162573 chr3R 15167324 15167365 F-element 11 4791 5.0 1.5 3.2 2.6 4832 chr3R 15162533 intron Gyc88E + chr3R 15164949 intron Gyc88E + chr3R 15167365 intron Gyc88E + chr3R_11_15160001 chr3R_15160001 Sg4 1950 chr3R 15416242 15416278 chr3R 15416329 15416383 11 103 3.0 4.5 3.8 2.3 141 chr3R 15416242 3` UTR Atx2 + chr3R 15416312 3` UTR Atx2 + chr3R 15416383 3` UTR Atx2 + chr3R_11_15415001 chr3R_15415001 Sg4 1951 chr3R 15585277 15585331 chr3R 15585402 15585456 15 122 1.5 4.0 2.8 3.9 179 chr3R 15585277 intergenic not near genes chr3R 15585366 intergenic not near genes chr3R 15585456 intergenic not near genes chr3R_15_15585001 chr3R_15585001 Sg4 1952 chr3R 15601163 15601192 chr3R 15608710 15608739 412 4 7547 3.0 6.5 4.8 0.7 7576 chr3R 15601163 intergenic not near genes chr3R 15604951 intergenic not near genes chr3R 15608739 intergenic not near genes chr3R_4_15600001 chr3R_15600001 Sg4 1953 chr3R 15635191 15635236 chr3R 15635337 15635373 6 142 0.0 4.0 2.0 2.0 182 chr3R 15635191 intergenic CG43335 + chr3R 15635282 intergenic CG43335 + chr3R 15635373 intergenic CG43335 + chr3R_6_15635001 chr3R_15635001 Sg4 1954 chr3R 15646765 15646787 chr3R 15646873 15646895 5 108 3.5 2.5 3.0 1.2 130 chr3R 15646765 intergenic not near genes chr3R 15646830 intergenic not near genes chr3R 15646895 intergenic not near genes chr3R_5_15645001 chr3R_15645001 Sg4 1955 chr3R 15687004 15687061 chr3R 15688945 15689002 6 1939 20.5 11.0 15.8 0.4 1998 chr3R 15687004 exon pxb + chr3R 15688003 3` UTR pxb + chr3R 15689002 3` UTR pxb + chr3R_6_15685001 chr3R_15685001 Sg4 1956 chr3R 15692495 15692540 chr3R 15692599 15692643 5 103 1.5 3.0 2.2 1.6 148 chr3R 15692495 intergenic not near genes chr3R 15692569 intergenic not near genes chr3R 15692643 intergenic CG31446 + chr3R_5_15690001 chr3R_15690001 Sg4 1957 chr3R 15817237 15817253 chr3R 15818263 15818280 5 1027 0.0 2.0 1.0 2.5 1043 chr3R 15817237 intron alpha-Man-IIb + chr3R 15817758 intron alpha-Man-IIb + chr3R 15818280 intron alpha-Man-IIb + chr3R_5_15815001 chr3R_15815001 Sg4 1958 chr3R 15912515 15912559 chr3R 15912653 15912697 13 138 4.5 4.0 4.2 2.5 182 chr3R 15912515 intron CG45105 - chr3R 15912606 intron CG45105 - chr3R 15912697 3` UTR CG45105 - chr3R_13_15910001 chr3R_15910001 Sg4 1959 chr3R 16013106 16013159 chr3R 16013214 16013272 15 112 4.5 2.5 3.5 3.3 166 chr3R 16013106 intron GATAe + chr3R 16013189 intron GATAe + chr3R 16013272 intron GATAe + chr3R_15_16010001 chr3R_16010001 Sg4 1960 chr3R 16024288 16024303 chr3R 16106491 16106536 5 82225 18.5 19.5 19.0 0.2 82248 chr3R 16024288 intergenic not near genes chr3R 16065412 exon CG10185 - chr3R 16106536 intergenic not near genes chr3R_5_16065001 chr3R_16065001 Sg4 1961 chr3R 16033402 16033428 chr3R 16033508 16033533 13 105 5.5 6.5 6.0 1.9 131 chr3R 16033402 intron pnr + chr3R 16033468 intron pnr + chr3R 16033533 intron pnr + chr3R_13_16030001 chr3R_16030001 Sg4 1962 chr3R 15969133 15969152 chr3R 16108682 16108702 7 139549 29.0 25.5 27.2 0.2 139569 chr3R 15969133 exon mor - chr3R 16038918 exon pnr + chr3R 16108702 intergenic not near genes chr3R_7_16035001 chr3R_16035001 Sg4 1963 chr3R 16194946 16194994 chr3R 16195308 16195356 5 360 13.0 15.5 14.2 0.3 410 chr3R 16194946 intron sra + chr3R 16195151 intron sra + chr3R 16195356 intron sra + chr3R_5_16195001 chr3R_16195001 Sg4 1964 chr3R 16246522 16246557 chr3R 16246623 16246658 9 100 1.5 8.5 5.0 1.5 136 chr3R 16246522 intron tara + chr3R 16246590 intron tara + chr3R 16246658 intron tara + chr3R_9_16245001 chr3R_16245001 Sg4 1965 chr3R 16374142 16374327 chr3R 16374246 16374463 8 132 2.0 5.0 3.5 1.8 321 chr3R 16374142 intergenic ss - chr3R 16374302 intergenic ss - chr3R 16374463 3` UTR ss - chr3R_8_16370001 chr3R_16370001 Sg4 1966 chr3R 16472557 16472594 chr3R 16472658 16472689 5 98 4.0 4.5 4.2 1.0 132 chr3R 16472557 intergenic Gyc-89Da + chr3R 16472623 5` UTR Gyc-89Da + chr3R 16472689 5` UTR Gyc-89Da + chr3R_5_16470001 chr3R_16470001 Sg4 1967 chr3R 16499553 16499573 chr3R 16499663 16499678 6 108 0.0 5.5 2.8 1.6 125 chr3R 16499553 intron decay - chr3R 16499616 intron decay - chr3R 16499678 intron decay - chr3R_6_16495001 chr3R_16495001 Sg4 1968 chr3R 16521192 16521229 chr3R 16521302 16521339 6 110 0.5 2.0 1.2 2.7 147 chr3R 16521192 intron CG42342 + chr3R 16521266 intron CG42342 + chr3R 16521339 intron CG42342 + chr3R_6_16520001 chr3R_16520001 Sg4 1969 chr3R 16582883 16582917 chr3R 16582987 16583021 6 104 6.0 10.5 8.2 0.7 138 chr3R 16582883 intron Scp2 - chr3R 16582952 intron Scp2 - chr3R 16583021 intron Scp2 - chr3R_6_16580001 chr3R_16580001 Sg4 1970 chr3R 16621501 16621544 chr3R 16621601 16621633 13 98 3.5 1.0 2.2 4.1 132 chr3R 16621501 exon CG14893 + chr3R 16621567 exon CG14893 + chr3R 16621633 exon CG14893 + chr3R_13_16620001 chr3R_16620001 Sg4 1971 chr3R 16756296 16756337 chr3R 16762512 16762553 diver 14 6216 2.5 2.0 2.2 4.4 6257 chr3R 16756296 intron bxd - chr3R 16759424 intron bxd - chr3R 16762553 intron bxd - chr3R_14_16755001 chr3R_16755001 Sg4 1972 chr3R 16868294 16868346 chr3R 16869415 16869467 5 1121 9.0 11.5 10.2 0.4 1173 chr3R 16868294 intron iab-8 - chr3R 16868880 intron iab-8 - chr3R 16869467 intron iab-8 - chr3R_5_16865001 chr3R_16865001 Sg4 1973 chr3R 16910466 16910500 chr3R 16910634 16910644 14 163 4.5 3.5 4.0 2.8 178 chr3R 16910466 intron iab-8 - chr3R 16910555 intron iab-8 - chr3R 16910644 intron iab-8 - chr3R_14_16910001 chr3R_16910001 Sg4 1974 chr3R 16971024 16971058 chr3R 16971134 16971168 5 110 0.0 1.0 0.5 3.3 144 chr3R 16971024 intron Abd-B - chr3R 16971096 intron Abd-B - chr3R 16971168 intron Abd-B - chr3R_5_16970001 chr3R_16970001 Sg4 1975 chr3R 17066762 17066788 chr3R 17066875 17066901 10 112 9.0 8.0 8.5 1.1 139 chr3R 17066762 intron Dad + chr3R 17066832 intron Dad + chr3R 17066901 intron Dad + chr3R_10_17065001 chr3R_17065001 Sg4 1976 chr3R 17066789 17066812 chr3R 17066872 17066904 12 105 4.0 7.5 5.8 1.8 115 chr3R 17066789 intron Dad + chr3R 17066846 intron Dad + chr3R 17066904 intron Dad + chr3R_12_17065001 chr3R_17065001 Sg4 1977 chr3R 17101252 17101294 chr3R 17102079 17102121 5 827 10.5 13.5 12.0 0.4 869 chr3R 17101252 intron cher - chr3R 17101686 intron cher - chr3R 17102121 intron cher - chr3R_5_17100001 chr3R_17100001 Sg4 1978 chr3R 17268658 17268700 chr3R 17268805 17268847 13 147 1.5 2.0 1.8 4.6 189 chr3R 17268658 intergenic not near genes chr3R 17268752 intergenic not near genes chr3R 17268847 intergenic not near genes chr3R_13_17265001 chr3R_17265001 Sg4 1979 chr3R 17290423 17290470 chr3R 17290534 17290581 17 110 4.5 3.5 4.0 3.4 158 chr3R 17290423 intergenic not near genes chr3R 17290502 intergenic not near genes chr3R 17290581 intergenic not near genes chr3R_17_17290001 chr3R_17290001 Sg4 1980 chr3R 17294646 17294695 chr3R 17295099 17295148 BS 9 450 3.0 2.0 2.5 2.6 502 chr3R 17294646 intergenic not near genes chr3R 17294897 intergenic not near genes chr3R 17295148 intergenic not near genes chr3R_9_17290001 chr3R_17290001 Sg4 1981 chr3R 17312793 17312849 chr3R 17312903 17312958 6 110 4.0 1.5 2.8 1.6 165 chr3R 17312793 intergenic not near genes chr3R 17312876 intergenic not near genes chr3R 17312958 intergenic not near genes chr3R_6_17310001 chr3R_17310001 Sg4 1982 chr3R 17346707 17346711 chr3R 17348295 17348299 F-element 4 1588 4.0 5.0 4.5 0.7 1592 chr3R 17346707 intron beat-IIa - chr3R 17347503 intron beat-IIa - chr3R 17348299 intron beat-IIa - chr3R_4_17345001 chr3R_17345001 Sg4 1983 chr3R 17355473 17355523 chr3R 17355576 17355626 5 103 2.0 1.5 1.8 1.8 153 chr3R 17355473 intron beat-IIa - chr3R 17355550 intron beat-IIa - chr3R 17355626 intron beat-IIa - chr3R_5_17355001 chr3R_17355001 Sg4 1984 chr3R 17461178 17461218 chr3R 17461285 17461325 8 107 1.0 0.5 0.8 4.4 147 chr3R 17461178 intergenic not near genes chr3R 17461252 intergenic not near genes chr3R 17461325 intergenic not near genes chr3R_8_17460001 chr3R_17460001 Sg4 1985 chr3R 17497943 17497988 chr3R 17498054 17498099 12 111 3.0 3.0 3.0 3.0 156 chr3R 17497943 intron Dscam3 - chr3R 17498021 intron Dscam3 - chr3R 17498099 intron Dscam3 - chr3R_12_17495001 chr3R_17495001 Sg4 1986 chr3R 17521576 17521581 chr3R 17521735 17521766 5 179 2.0 1.0 1.5 2.0 190 chr3R 17521576 intergenic not near genes chr3R 17521671 intergenic not near genes chr3R 17521766 intergenic not near genes chr3R_5_17520001 chr3R_17520001 Sg4 1987 chr3R 17554334 17554384 chr3R 17554636 17554686 12 301 4.0 6.0 5.0 2.0 352 chr3R 17554334 intergenic not near genes chr3R 17554510 intergenic not near genes chr3R 17554686 intergenic not near genes chr3R_12_17550001 chr3R_17550001 Sg4 1988 chr3R 17591262 17591301 chr3R 17591723 17591762 F-element 12 458 2.0 2.5 2.2 3.8 500 chr3R 17591262 intergenic not near genes chr3R 17591512 intergenic not near genes chr3R 17591762 intergenic not near genes chr3R_12_17590001 chr3R_17590001 Sg4 1989 chr3R 17638310 17638335 chr3R 17638821 17638846 roo 4 511 1.5 1.0 1.2 1.8 536 chr3R 17638310 intron CG43175 + chr3R 17638578 intron CG43175 + chr3R 17638846 intron,intron CG43175 +,CR45222 + chr3R_4_17635001 chr3R_17635001 Sg4 1990 chr3R 17647221 17647273 chr3R 17647342 17647395 5 121 1.5 2.5 2.0 1.7 174 chr3R 17647221 intergenic CG14322 + chr3R 17647308 intergenic CG14322 + chr3R 17647395 intergenic CG14322 + chr3R_5_17645001 chr3R_17645001 Sg4 1991 chr3R 17659088 17659134 chr3R 17662035 17662081 12 2947 22.0 20.0 21.0 0.5 2993 chr3R 17659088 intron CG14322 + chr3R 17660584 intron CG14322 + chr3R 17662081 exon CG14322 + chr3R_12_17660001 chr3R_17660001 Sg4 1992 chr3R 17702151 17702200 chr3R 17702255 17702299 10 103 3.0 3.0 3.0 2.5 148 chr3R 17702151 intron osa - chr3R 17702225 intron osa - chr3R 17702299 intron osa - chr3R_10_17700001 chr3R_17700001 Sg4 1993 chr3R 17925835 17925867 chr3R 17927327 17927359 hobo 6 1491 7.0 1.0 4.0 1.2 1524 chr3R 17925835 intron cpo + chr3R 17926597 intron cpo + chr3R 17927359 intron cpo + chr3R_6_17925001 chr3R_17925001 Sg4 1994 chr3R 17983193 17983225 chr3R 17983294 17983305 5 91 2.0 0.0 1.0 2.5 112 chr3R 17983193 intron cpo + chr3R 17983249 intron cpo + chr3R 17983305 intron cpo + chr3R_5_17980001 chr3R_17980001 Sg4 1995 chr3R 18061571 18061609 chr3R 18063164 18063202 F-element 5 1591 2.5 2.0 2.2 1.6 1631 chr3R 18061571 intergenic not near genes chr3R 18062386 intergenic not near genes chr3R 18063202 intergenic not near genes chr3R_5_18060001 chr3R_18060001 Sg4 1996 chr3R 18067961 18068024 chr3R 18068082 18068131 7 113 0.0 1.0 0.5 4.7 170 chr3R 18067961 intergenic not near genes chr3R 18068046 intergenic not near genes chr3R 18068131 intergenic not near genes chr3R_7_18065001 chr3R_18065001 Sg4 1997 chr3R 18076973 18077018 chr3R 18077184 18077201 5 203 7.5 12.0 9.8 0.5 228 chr3R 18076973 intergenic not near genes chr3R 18077087 intergenic not near genes chr3R 18077201 intergenic not near genes chr3R_5_18075001 chr3R_18075001 Sg4 1998 chr3R 18341587 18341628 chr3R 18341702 18341743 11 115 2.0 3.0 2.5 3.1 156 chr3R 18341587 intron CG15803 - chr3R 18341665 intron CG15803 - chr3R 18341743 intron CG15803 - chr3R_11_18340001 chr3R_18340001 Sg4 1999 chr3R 18352569 18352605 chr3R 18352687 18352723 7 116 2.0 6.5 4.2 1.3 154 chr3R 18352569 intron CG15803 - chr3R 18352646 intron CG15803 - chr3R 18352723 intron CG15803 - chr3R_7_18350001 chr3R_18350001 Sg4 2000 chr3R 18473213 18473224 chr3R 18473325 18473336 4 112 4.5 3.5 4.0 0.8 123 chr3R 18473213 intron fru - chr3R 18473274 intron fru - chr3R 18473336 intron fru - chr3R_4_18470001 chr3R_18470001 Sg4 2001 chr3R 18501597 18501623 chr3R 18501703 18501729 6 106 1.5 5.5 3.5 1.3 132 chr3R 18501597 intron fru - chr3R 18501663 intron fru - chr3R 18501729 intron fru - chr3R_6_18500001 chr3R_18500001 Sg4 2002 chr3R 18567582 18567619 chr3R 18567699 18567736 6 117 2.5 2.0 2.2 1.9 154 chr3R 18567582 intergenic not near genes chr3R 18567659 intergenic not near genes chr3R 18567736 intergenic not near genes chr3R_6_18565001 chr3R_18565001 Sg4 2003 chr3R 18584419 18584457 chr3R 18584526 18584577 8 117 12.0 10.0 11.0 0.7 158 chr3R 18584419 intron,intron CG7694 +,fray + chr3R 18584498 intron,intron CG7694 +,fray + chr3R 18584577 intron,intron CG7694 +,fray + chr3R_8_18580001 chr3R_18580001 Sg4 2004 chr3R 18606490 18606524 chr3R 18610747 18610781 F-element 4 4257 2.5 4.5 3.5 0.9 4291 chr3R 18606490 intron,intron qin +,CG14304 - chr3R 18608636 intron,intron qin +,CG14304 - chr3R 18610781 intron,intron qin +,CG14304 - chr3R_4_18605001 chr3R_18605001 Sg4 2005 chr3R 18628857 18629032 chr3R 18629006 18629147 7 125 0.0 0.0 0.0 7.0 290 chr3R 18628857 intron qin + chr3R 18629002 intron qin + chr3R 18629147 intron qin + chr3R_7_18625001 chr3R_18625001 Sg4 2006 chr3R 18781674 18781710 chr3R 18781770 18781811 7 94 3.0 2.5 2.8 1.8 137 chr3R 18781674 intron CG7720 - chr3R 18781742 intron CG7720 - chr3R 18781811 intron CG7720 - chr3R_7_18780001 chr3R_18780001 Sg4 2007 chr3R 18791481 18791509 chr3R 18791585 18791613 5 104 2.0 0.5 1.2 2.3 132 chr3R 18791481 intron CG7720 - chr3R 18791547 intron CG7720 - chr3R 18791613 intron CG7720 - chr3R_5_18790001 chr3R_18790001 Sg4 2008 chr3R 18807310 18807320 chr3R 18807412 18807422 5 101 3.0 0.0 1.5 2.0 112 chr3R 18807310 intron CG18208 - chr3R 18807366 intron CG18208 - chr3R 18807422 intron CG18208 - chr3R_5_18805001 chr3R_18805001 Sg4 2009 chr3R 18812062 18812107 chr3R 18812165 18812210 12 103 4.0 6.0 5.0 2.0 148 chr3R 18812062 intron CG18208 - chr3R 18812136 intron CG18208 - chr3R 18812210 intron CG18208 - chr3R_12_18810001 chr3R_18810001 Sg4 2010 chr3R 18817499 18817534 chr3R 18817622 18817656 6 123 0.0 0.0 0.0 6.0 157 chr3R 18817499 intron CG18208 - chr3R 18817578 intron CG18208 - chr3R 18817656 intron CG18208 - chr3R_6_18815001 chr3R_18815001 Sg4 2011 chr3R 18839786 18839829 chr3R 18839895 18839938 10 109 3.5 2.5 3.0 2.5 152 chr3R 18839786 intron CG18208 - chr3R 18839862 intron CG18208 - chr3R 18839938 intron CG18208 - chr3R_10_18835001 chr3R_18835001 Sg4 2012 chr3R 18863157 18863182 chr3R 18863268 18863293 4 111 0.0 3.5 1.8 1.4 136 chr3R 18863157 intergenic not near genes chr3R 18863225 intergenic not near genes chr3R 18863293 intergenic not near genes chr3R_4_18860001 chr3R_18860001 Sg4 2013 chr3R 18887576 18887596 chr3R 18887682 18887702 6 106 10.0 6.0 8.0 0.7 126 chr3R 18887576 intergenic not near genes chr3R 18887639 intergenic not near genes chr3R 18887702 intergenic not near genes chr3R_6_18885001 chr3R_18885001 Sg4 2014 chr3R 18892109 18892146 chr3R 18892210 18892251 7 103 4.5 3.0 3.8 1.5 142 chr3R 18892109 intergenic not near genes chr3R 18892180 intergenic not near genes chr3R 18892251 intergenic not near genes chr3R_7_18890001 chr3R_18890001 Sg4 2015 chr3R 18942597 18942625 chr3R 18942688 18942728 7 91 1.0 2.5 1.8 2.5 131 chr3R 18942597 intron CG42613 + chr3R 18942662 intron CG42613 + chr3R 18942728 intron CG42613 + chr3R_7_18940001 chr3R_18940001 Sg4 2016 chr3R 19089092 19089136 chr3R 19089590 19089634 6 498 9.5 11.5 10.5 0.5 542 chr3R 19089092 intron cdi - chr3R 19089363 intron cdi - chr3R 19089634 intron cdi - chr3R_6_19085001 chr3R_19085001 Sg4 2017 chr3R 19276905 19276942 chr3R 19277010 19277047 11 105 3.0 0.5 1.8 3.9 142 chr3R 19276905 intergenic not near genes chr3R 19276976 intergenic not near genes chr3R 19277047 intergenic not near genes chr3R_11_19275001 chr3R_19275001 Sg4 2018 chr3R 19280539 19280585 chr3R 19280640 19280686 4 101 1.5 3.0 2.2 1.2 147 chr3R 19280539 intergenic not near genes chr3R 19280612 intergenic not near genes chr3R 19280686 intergenic not near genes chr3R_4_19280001 chr3R_19280001 Sg4 2019 chr3R 19344685 19344699 chr3R 19344845 19344859 4 160 2.5 3.5 3.0 1.0 174 chr3R 19344685 intergenic not near genes chr3R 19344772 intergenic not near genes chr3R 19344859 intergenic not near genes chr3R_4_19340001 chr3R_19340001 Sg4 2020 chr3R 19369484 19369509 chr3R 19369596 19369621 5 112 0.5 1.5 1.0 2.5 137 chr3R 19369484 intron Ino80 - chr3R 19369552 intron Ino80 - chr3R 19369621 intron Ino80 - chr3R_5_19365001 chr3R_19365001 Sg4 2021 chr3R 19418387 19418432 chr3R 19418504 19418549 11 117 3.0 1.0 2.0 3.7 162 chr3R 19418387 intron CG31221 + chr3R 19418468 intron CG31221 + chr3R 19418549 intron CG31221 + chr3R_11_19415001 chr3R_19415001 Sg4 2022 chr3R 19490421 19490467 chr3R 19490535 19490581 11 113 3.0 2.0 2.5 3.1 160 chr3R 19490421 intron,exon Dys +,CG15025 - chr3R 19490501 intron,intron Dys +,CG15025 - chr3R 19490581 intron,exon Dys +,CG15025 - chr3R_11_19490001 chr3R_19490001 Sg4 2023 chr3R 19589374 19589424 chr3R 19590564 19590614 6 1190 11.5 17.0 14.2 0.4 1240 chr3R 19589374 intron Dys + chr3R 19589994 intron Dys + chr3R 19590614 exon Dys + chr3R_6_19585001 chr3R_19585001 Sg4 2024 chr3R 19590624 19590644 chr3R 19590741 19590761 10 117 4.0 8.0 6.0 1.4 137 chr3R 19590624 exon Dys + chr3R 19590692 intron Dys + chr3R 19590761 exon Dys + chr3R_10_19590001 chr3R_19590001 Sg4 2025 chr3R 19633271 19633291 chr3R 19633382 19633402 6 110 4.5 2.5 3.5 1.3 131 chr3R 19633271 intergenic subdued - chr3R 19633336 intergenic subdued - chr3R 19633402 intergenic subdued - chr3R_6_19630001 chr3R_19630001 Sg4 2026 chr3R 19678461 19678518 chr3R 19678578 19678635 17 117 2.0 2.5 2.2 5.3 174 chr3R 19678461 intron Naam + chr3R 19678548 intron Naam + chr3R 19678635 intron Naam + chr3R_17_19675001 chr3R_19675001 Sg4 2027 chr3R 19702303 19702348 chr3R 19702410 19702455 11 106 3.0 5.0 4.0 2.2 152 chr3R 19702303 intergenic not near genes chr3R 19702379 intergenic not near genes chr3R 19702455 intergenic not near genes chr3R_11_19700001 chr3R_19700001 Sg4 2028 chr3R 19729522 19729562 chr3R 19729701 19729747 6 184 4.5 10.0 7.2 0.7 225 chr3R 19729522 intergenic not near genes chr3R 19729634 intergenic not near genes chr3R 19729747 intergenic not near genes chr3R_6_19725001 chr3R_19725001 Sg4 2029 chr3R 19783158 19783207 chr3R 19783271 19783320 10 113 2.0 1.0 1.5 4.0 162 chr3R 19783158 intergenic CG11407 +,CG11453 + chr3R 19783239 intergenic CG11407 +,CG11453 + chr3R 19783320 intergenic CG11407 +,CG11453 + chr3R_10_19780001 chr3R_19780001 Sg4 2030 chr3R 19846934 19846964 chr3R 19847119 19847149 8 184 6.5 0.0 3.2 1.9 215 chr3R 19846934 intergenic CG4662 + chr3R 19847042 intergenic CG4662 + chr3R 19847149 intergenic CG4662 + chr3R_8_19845001 chr3R_19845001 Sg4 2031 chr3R 19908245 19908305 chr3R 19908354 19908414 8 108 0.0 3.0 1.5 3.2 169 chr3R 19908245 intron RhoGAP92B + chr3R 19908330 intron RhoGAP92B + chr3R 19908414 intron,3` UTR RhoGAP92B +,CR45048 - chr3R_8_19905001 chr3R_19905001 Sg4 2032 chr3R 19987164 19987215 chr3R 19987269 19987321 15 105 5.5 2.5 4.0 3.0 157 chr3R 19987164 intron Hs6st - chr3R 19987242 intron Hs6st - chr3R 19987321 intron Hs6st - chr3R_15_19985001 chr3R_19985001 Sg4 2033 chr3R 20008799 20008850 chr3R 20008905 20008956 17 106 4.0 2.5 3.2 4.0 157 chr3R 20008799 intergenic MED25 +,Hs6st - chr3R 20008878 intergenic MED25 +,Hs6st - chr3R 20008956 5` UTR MED25 + chr3R_17_20005001 chr3R_20005001 Sg4 2034 chr3R 20060618 20060655 chr3R 20060726 20060747 10 106 3.5 2.5 3.0 2.5 129 chr3R 20060618 intergenic not near genes chr3R 20060682 intergenic not near genes chr3R 20060747 intergenic not near genes chr3R_10_20060001 chr3R_20060001 Sg4 2035 chr3R 20064272 20064308 chr3R 20064386 20064418 14 110 4.5 2.5 3.5 3.1 146 chr3R 20064272 intergenic not near genes chr3R 20064345 intergenic not near genes chr3R 20064418 intergenic not near genes chr3R_14_20060001 chr3R_20060001 Sg4 2036 chr3R 20077019 20077043 chr3R 20077130 20077144 6 108 5.5 5.5 5.5 0.9 125 chr3R 20077019 intergenic not near genes chr3R 20077082 intergenic not near genes chr3R 20077144 intergenic not near genes chr3R_6_20075001 chr3R_20075001 Sg4 2037 chr3R 20078820 20078850 chr3R 20079004 20079036 14 186 5.5 1.5 3.5 3.1 216 chr3R 20078820 intergenic not near genes chr3R 20078928 intergenic not near genes chr3R 20079036 intergenic not near genes chr3R_14_20075001 chr3R_20075001 Sg4 2038 chr3R 20109515 20109554 chr3R 20114746 20114785 copia 6 5231 2.0 3.5 2.8 1.6 5270 chr3R 20109515 intergenic not near genes chr3R 20112150 intergenic not near genes chr3R 20114785 intergenic CG10887 + chr3R_6_20110001 chr3R_20110001 Sg4 2039 chr3R 20155791 20155833 chr3R 20156401 20156443 7 610 6.5 4.0 5.2 1.1 652 chr3R 20155791 intergenic not near genes chr3R 20156117 intergenic not near genes chr3R 20156443 intergenic not near genes chr3R_7_20155001 chr3R_20155001 Sg4 2040 chr3R 20156677 20156719 chr3R 20165865 20165914 roo 14 9194 2.5 2.0 2.2 4.4 9237 chr3R 20156677 intergenic not near genes chr3R 20161296 intergenic not near genes chr3R 20165914 intergenic not near genes chr3R_14_20160001 chr3R_20160001 Sg4 2041 chr3R 20173755 20173791 chr3R 20173864 20173915 9 111 2.0 0.0 1.0 4.5 160 chr3R 20173755 intron CG5023 + chr3R 20173835 intron CG5023 + chr3R 20173915 intron CG5023 + chr3R_9_20170001 chr3R_20170001 Sg4 2042 chr3R 20245266 20245303 chr3R 20248901 20248938 F-element 5 3635 0.0 0.5 0.2 4.2 3672 chr3R 20245266 3` UTR Nlg4 + chr3R 20247102 intergenic not near genes chr3R 20248938 intergenic not near genes chr3R_5_20245001 chr3R_20245001 Sg4 2043 chr3R 20252225 20252247 chr3R 20252328 20252350 6 103 1.0 0.5 0.8 3.3 125 chr3R 20252225 intergenic not near genes chr3R 20252288 intergenic cic + chr3R 20252350 intergenic cic + chr3R_6_20250001 chr3R_20250001 Sg4 2044 chr3R 20256845 20256867 chr3R 20256948 20256970 4 103 0.0 5.5 2.8 1.1 125 chr3R 20256845 intron cic + chr3R 20256908 intron cic + chr3R 20256970 intron cic + chr3R_4_20255001 chr3R_20255001 Sg4 2045 chr3R 20266500 20266537 chr3R 20272996 20273033 Burdock 10 6494 2.5 1.5 2.0 3.3 6533 chr3R 20266500 intron cic + chr3R 20269766 intron cic + chr3R 20273033 intron cic + chr3R_10_20265001 chr3R_20265001 Sg4 2046 chr3R 20282260 20282308 chr3R 20282361 20282409 8 101 0.0 2.0 1.0 4.0 149 chr3R 20282260 intron cic + chr3R 20282334 intron cic + chr3R 20282409 intron cic + chr3R_8_20280001 chr3R_20280001 Sg4 2047 chr3R 20286124 20286157 chr3R 20286256 20286289 5 131 7.5 0.5 4.0 1.0 165 chr3R 20286124 intron cic + chr3R 20286206 intron cic + chr3R 20286289 intron cic + chr3R_5_20285001 chr3R_20285001 Sg4 2048 chr3R 20308165 20308219 chr3R 20308278 20308343 7 118 5.0 0.0 2.5 2.0 178 chr3R 20308165 intergenic not near genes chr3R 20308254 intergenic not near genes chr3R 20308343 intergenic not near genes chr3R_7_20305001 chr3R_20305001 Sg4 2049 chr3R 20330983 20331014 chr3R 20331494 20331525 roo 8 511 7.0 3.5 5.2 1.3 542 chr3R 20330983 intergenic Sirt2 + chr3R 20331254 intergenic Sirt2 + chr3R 20331525 intergenic not near genes chr3R_8_20330001 chr3R_20330001 Sg4 2050 chr3R 20349445 20349497 chr3R 20350307 20350359 14 861 3.0 1.0 2.0 4.7 914 chr3R 20349445 intergenic not near genes chr3R 20349902 intergenic not near genes chr3R 20350359 intergenic not near genes chr3R_14_20345001 chr3R_20345001 Sg4 2051 chr3R 20375841 20375869 chr3R 20375957 20375985 5 115 4.5 2.0 3.2 1.2 144 chr3R 20375841 intergenic not near genes chr3R 20375913 intergenic not near genes chr3R 20375985 intergenic not near genes chr3R_5_20375001 chr3R_20375001 Sg4 2052 chr3R 20442822 20442878 chr3R 20442986 20443043 18 165 4.0 4.5 4.2 3.5 221 chr3R 20442822 intron Gfrl - chr3R 20442932 intron Gfrl - chr3R 20443043 intron Gfrl - chr3R_18_20440001 chr3R_20440001 Sg4 2053 chr3R 20453625 20453656 chr3R 20453754 20453780 15 127 8.0 4.5 6.2 2.1 155 chr3R 20453625 intron Gfrl - chr3R 20453702 intron Gfrl - chr3R 20453780 intron Gfrl - chr3R_15_20450001 chr3R_20450001 Sg4 2054 chr3R 20478387 20478434 chr3R 20478498 20478545 11 110 2.5 1.0 1.8 3.9 158 chr3R 20478387 intron Gfrl - chr3R 20478466 intron Gfrl - chr3R 20478545 intron Gfrl - chr3R_11_20475001 chr3R_20475001 Sg4 2055 chr3R 20506567 20506610 chr3R 20507395 20507438 BS 13 828 0.0 3.5 1.8 4.6 871 chr3R 20506567 intergenic Or92a + chr3R 20507002 intergenic CG4288 - chr3R 20507438 3` UTR CG4288 - chr3R_13_20505001 chr3R_20505001 Sg4 2056 chr3R 20512993 20513034 chr3R 20515721 20515762 opus 5 2728 2.5 4.5 3.5 1.1 2769 chr3R 20512993 intergenic not near genes chr3R 20514378 intergenic not near genes chr3R 20515762 intergenic not near genes chr3R_5_20510001 chr3R_20510001 Sg4 2057 chr3R 20594465 20594500 chr3R 20594580 20594615 7 115 0.5 0.0 0.2 5.8 150 chr3R 20594465 intron bon + chr3R 20594540 intron bon + chr3R 20594615 intron bon + chr3R_7_20590001 chr3R_20590001 Sg4 2058 chr3R 20617512 20617518 chr3R 20617796 20617812 4 290 1.0 3.5 2.2 1.2 300 chr3R 20617512 intergenic CG5466 + chr3R 20617662 intergenic CG5466 + chr3R 20617812 intergenic CG5466 + chr3R_4_20615001 chr3R_20615001 Sg4 2059 chr3R 20707723 20707772 chr3R 20707963 20708012 22 239 4.0 7.0 5.5 3.4 289 chr3R 20707723 intron Oamb - chr3R 20707868 intron Oamb - chr3R 20708012 intron Oamb - chr3R_22_20705001 chr3R_20705001 Sg4 2060 chr3R 20730907 20731057 chr3R 20731032 20731170 10 119 0.0 0.0 0.0 10.0 263 chr3R 20730907 intergenic not near genes chr3R 20731038 intergenic not near genes chr3R 20731170 intergenic CG31205 + chr3R_10_20730001 chr3R_20730001 Sg4 2061 chr3R 20771713 20771727 chr3R 20771802 20771802 6 98 0.0 8.0 4.0 1.2 89 chr3R 20771713 intron,intron Syp +,Takl1 - chr3R 20771758 intron,intron Syp +,Takl1 - chr3R 20771802 intron,exon Syp +,Takl1 - chr3R_6_20770001 chr3R_20770001 Sg4 2062 chr3R 20854465 20854516 chr3R 20859280 20859308 Doc 5 4808 4.0 3.5 3.8 1.0 4843 chr3R 20854465 intron Ir93a - chr3R 20856886 intron Ir93a - chr3R 20859308 exon Ir93a - chr3R_5_20855001 chr3R_20855001 Sg4 2063 chr3R 20870228 20870283 chr3R 20870338 20870393 12 110 3.0 2.0 2.5 3.4 165 chr3R 20870228 intergenic not near genes chr3R 20870310 intergenic not near genes chr3R 20870393 intergenic not near genes chr3R_12_20870001 chr3R_20870001 Sg4 2064 chr3R 20891493 20891531 chr3R 20892033 20892071 4 540 24.5 55.5 40.0 0.1 578 chr3R 20891493 intergenic not near genes chr3R 20891782 intergenic not near genes chr3R 20892071 intergenic not near genes chr3R_4_20890001 chr3R_20890001 Sg4 2065 chr3R 20901325 20901354 chr3R 20901435 20901465 17 109 10.0 14.0 12.0 1.3 140 chr3R 20901325 intergenic not near genes chr3R 20901395 intergenic not near genes chr3R 20901465 intergenic CG5621 + chr3R_17_20900001 chr3R_20900001 Sg4 2066 chr3R 20901355 20901377 chr3R 20901429 20901487 16 104 4.0 11.5 7.8 1.8 132 chr3R 20901355 intergenic not near genes chr3R 20901421 intergenic not near genes chr3R 20901487 intergenic CG5621 + chr3R_16_20900001 chr3R_20900001 Sg4 2067 chr3R 20915149 20915185 chr3R 20915262 20915298 9 112 2.5 5.5 4.0 1.8 149 chr3R 20915149 intron,intron CG31191 -,hdly + chr3R 20915224 intron,intron CG31191 -,hdly + chr3R 20915298 intron,intron CG31191 -,hdly + chr3R_9_20915001 chr3R_20915001 Sg4 2068 chr3R 20932470 20932497 chr3R 20932651 20932678 9 181 7.5 5.0 6.2 1.2 208 chr3R 20932470 intron CG31191 - chr3R 20932574 intron CG31191 - chr3R 20932678 intron CG31191 - chr3R_9_20930001 chr3R_20930001 Sg4 2069 chr3R 21013993 21014040 chr3R 21014096 21014143 17 102 6.5 3.5 5.0 2.8 150 chr3R 21013993 3` UTR Calx + chr3R 21014068 3` UTR Calx + chr3R 21014143 3` UTR Calx + chr3R_17_21010001 chr3R_21010001 Sg4 2070 chr3R 21049886 21049908 chr3R 21050104 21050126 9 218 4.5 13.0 8.8 0.9 240 chr3R 21049886 intergenic CG17279 - chr3R 21050006 intergenic CG17279 - chr3R 21050126 exon CG17279 - chr3R_9_21050001 chr3R_21050001 Sg4 2071 chr3R 21074806 21074820 chr3R 21075052 21075066 6 246 5.0 9.0 7.0 0.8 260 chr3R 21074806 intron dmrt93B + chr3R 21074936 intron dmrt93B + chr3R 21075066 intron dmrt93B + chr3R_6_21070001 chr3R_21070001 Sg4 2072 chr3R 21108013 21108051 chr3R 21108299 21108337 16 285 5.0 8.0 6.5 2.1 324 chr3R 21108013 intergenic Sec15 -,rtet + chr3R 21108175 intergenic Sec15 -,rtet + chr3R 21108337 intergenic rtet +,Sec15 - chr3R_16_21105001 chr3R_21105001 Sg4 2073 chr3R 21132606 21132648 chr3R 21132714 21132756 6 108 6.5 0.0 3.2 1.4 150 chr3R 21132606 3` UTR Ice2 + chr3R 21132681 3` UTR Ice2 + chr3R 21132756 exon CG7009 - chr3R_6_21130001 chr3R_21130001 Sg4 2074 chr3R 21141650 21141705 chr3R 21150156 21150210 Tirant 14 8502 7.5 9.0 8.2 1.5 8560 chr3R 21141650 intron SNF4Agamma + chr3R 21145930 intron SNF4Agamma + chr3R 21150210 intron SNF4Agamma + chr3R_14_21145001 chr3R_21145001 Sg4 2075 chr3R 21154527 21154587 chr3R 21154757 21154802 22 237 4.5 0.0 2.2 6.9 275 chr3R 21154527 intron SNF4Agamma + chr3R 21154664 intron SNF4Agamma + chr3R 21154802 intron SNF4Agamma + chr3R_22_21150001 chr3R_21150001 Sg4 2076 chr3R 21188037 21188086 chr3R 21188172 21188220 4 134 0.0 0.0 0.0 4.0 183 chr3R 21188037 intron SNF4Agamma + chr3R 21188128 intron SNF4Agamma + chr3R 21188220 intron SNF4Agamma + chr3R_4_21185001 chr3R_21185001 Sg4 2077 chr3R 21189670 21189721 chr3R 21189772 21189824 8 102 2.0 4.0 3.0 2.0 154 chr3R 21189670 intron SNF4Agamma + chr3R 21189747 intron SNF4Agamma + chr3R 21189824 intron SNF4Agamma + chr3R_8_21185001 chr3R_21185001 Sg4 2078 chr3R 21240422 21240478 chr3R 21240539 21240595 13 117 8.0 3.0 5.5 2.0 173 chr3R 21240422 intergenic not near genes chr3R 21240508 intergenic not near genes chr3R 21240595 intergenic not near genes chr3R_13_21240001 chr3R_21240001 Sg4 2079 chr3R 21343804 21343843 chr3R 21343922 21343961 14 118 4.5 4.5 4.5 2.5 157 chr3R 21343804 intron CG16791 - chr3R 21343882 intron CG16791 - chr3R 21343961 intron CG16791 - chr3R_14_21340001 chr3R_21340001 Sg4 2080 chr3R 21471992 21472024 chr3R 21472098 21472130 20 106 13.5 6.5 10.0 1.8 138 chr3R 21471992 intergenic not near genes chr3R 21472061 intergenic not near genes chr3R 21472130 intergenic not near genes chr3R_20_21470001 chr3R_21470001 Sg4 2081 chr3R 21481361 21481367 chr3R 21481477 21481483 4 116 17.0 0.0 8.5 0.4 122 chr3R 21481361 intergenic not near genes chr3R 21481422 intergenic not near genes chr3R 21481483 intergenic not near genes chr3R_4_21480001 chr3R_21480001 Sg4 2082 chr3R 21519000 21519053 chr3R 21519110 21519118 16 81 13.0 4.5 8.8 1.6 118 chr3R 21519000 intergenic not near genes chr3R 21519059 intergenic not near genes chr3R 21519118 intergenic not near genes chr3R_16_21515001 chr3R_21515001 Sg4 2083 chr3R 21519962 21520132 chr3R 21520088 21520251 26 124 1.0 1.0 1.0 13.0 289 chr3R 21519962 intergenic not near genes chr3R 21520106 intergenic not near genes chr3R 21520251 intergenic not near genes chr3R_26_21520001 chr3R_21520001 Sg4 2084 chr3R 21628130 21628183 chr3R 21628248 21628301 17 118 9.0 1.5 5.2 2.7 171 chr3R 21628130 intron E2f - chr3R 21628216 intron E2f - chr3R 21628301 intron E2f - chr3R_17_21625001 chr3R_21625001 Sg4 2085 chr3R 21651214 21651266 chr3R 21651317 21651369 20 103 4.0 3.5 3.8 4.2 155 chr3R 21651214 intron E2f - chr3R 21651292 intron E2f - chr3R 21651369 intron E2f - chr3R_20_21650001 chr3R_21650001 Sg4 2086 chr3R 21833820 21833852 chr3R 21834818 21834850 6 998 18.0 16.5 17.2 0.3 1030 chr3R 21833820 intron Gr93a + chr3R 21834335 intergenic Gr93a + chr3R 21834850 intergenic not near genes chr3R_6_21830001 chr3R_21830001 Sg4 2087 chr3R 21903509 21903635 chr3R 21903614 21903757 7 120 0.0 0.0 0.0 7.0 248 chr3R 21903509 intron CG6678 + chr3R 21903633 intron CG6678 + chr3R 21903757 intron CG6678 + chr3R_7_21900001 chr3R_21900001 Sg4 2088 chr3R 8339246 8339247 chr3R 21907534 21907534 11 13568288 21.0 20.0 20.5 0.5 13568288 chr3R 8339246 intergenic not near genes chr3R 15123390 intron CG42788 - chr3R 21907534 intergenic CG6678 + chr3R_11_15120001 chr3R_15120001 Sg4 2089 chr3R 9620954 9620956 chr3R 21907534 21907534 4 12286579 14.0 20.0 17.0 0.2 12286580 chr3R 9620954 intron CG8312 + chr3R 15764244 intergenic not near genes chr3R 21907534 intergenic CG6678 + chr3R_4_15760001 chr3R_15760001 Sg4 2090 chr3R 17389054 17389054 chr3R 21907534 21907534 7 4518480 11.0 20.0 15.5 0.4 4518480 chr3R 17389054 intron,3` UTR Brf -,lute + chr3R 19648294 5` UTR CG6195 - chr3R 21907534 intergenic CG6678 + chr3R_7_19645001 chr3R_19645001 Sg4 2091 chr3R 21907534 21907534 chr3R 24389465 24389465 5 2481931 20.0 13.5 16.8 0.3 2481931 chr3R 21907534 intergenic CG6678 + chr3R 23148500 intergenic not near genes chr3R 24389465 intron CG5768 - chr3R_5_23145001 chr3R_23145001 Sg4 2092 chr3R 21907534 21907534 chr3R 28831801 28831802 30 6924268 20.0 24.0 22.0 1.3 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_30_25365001 chr3R_25365001 Sg4 2093 chr3R 8339246 8339247 chr3R 21907535 21907535 10 13568288 21.0 20.0 20.5 0.5 13568289 chr3R 8339246 intergenic not near genes chr3R 15123390 intron CG42788 - chr3R 21907535 intergenic CG6678 + chr3R_10_15120001 chr3R_15120001 Sg4 2094 chr3R 9620956 9620956 chr3R 21907535 21907535 17 12286579 14.0 20.0 17.0 0.9 12286579 chr3R 9620956 intron CG8312 + chr3R 15764246 intergenic not near genes chr3R 21907535 intergenic CG6678 + chr3R_17_15760001 chr3R_15760001 Sg4 2095 chr3R 21907535 21907535 chr3R 28831801 28831802 41 6924266 20.0 24.0 22.0 1.8 6924267 chr3R 21907535 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_41_25365001 chr3R_25365001 Sg4 2096 chr3R 9620956 9620957 chr3R 21907536 21907536 6 12286579 14.0 20.0 17.0 0.3 12286580 chr3R 9620956 intron CG8312 + chr3R 15764246 intergenic not near genes chr3R 21907536 intergenic CG6678 + chr3R_6_15760001 chr3R_15760001 Sg4 2097 chr3R 21907536 21907536 chr3R 28831801 28831802 67 6924266 20.5 24.0 22.2 2.9 6924266 chr3R 21907536 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831802 intron WASp - chr3R_67_25365001 chr3R_25365001 Sg4 2098 chr3R 21937213 21937233 chr3R 21937310 21937335 7 101 2.5 6.5 4.5 1.3 122 chr3R 21937213 intergenic not near genes chr3R 21937274 intergenic not near genes chr3R 21937335 intergenic not near genes chr3R_7_21935001 chr3R_21935001 Sg4 2099 chr3R 22057494 22057532 chr3R 22057597 22057635 9 102 3.0 2.5 2.8 2.4 141 chr3R 22057494 intron how + chr3R 22057564 intron how + chr3R 22057635 intron how + chr3R_9_22055001 chr3R_22055001 Sg4 2100 chr3R 22061494 22061543 chr3R 22061652 22061701 10 158 3.0 5.0 4.0 2.0 207 chr3R 22061494 intron how + chr3R 22061598 intron how + chr3R 22061701 intron how + chr3R_10_22060001 chr3R_22060001 Sg4 2101 chr3R 22084581 22084617 chr3R 22084694 22084731 5 113 0.0 4.0 2.0 1.7 150 chr3R 22084581 intergenic not near genes chr3R 22084656 intergenic not near genes chr3R 22084731 intergenic not near genes chr3R_5_22080001 chr3R_22080001 Sg4 2102 chr3R 22144580 22144625 chr3R 22144796 22144836 6 215 1.0 3.0 2.0 2.0 256 chr3R 22144580 intron SKIP + chr3R 22144708 intron SKIP + chr3R 22144836 intron SKIP + chr3R_6_22140001 chr3R_22140001 Sg4 2103 chr3R 22234659 22234703 chr3R 22236003 22236047 pogo 8 1340 4.5 5.0 4.8 1.4 1388 chr3R 22234659 intron SKIP + chr3R 22235353 intron SKIP + chr3R 22236047 intron SKIP + chr3R_8_22235001 chr3R_22235001 Sg4 2104 chr3R 22239473 22239524 chr3R 22248558 22248597 roo 5 9075 3.5 3.0 3.2 1.2 9124 chr3R 22239473 intron SKIP + chr3R 22244035 intron SKIP + chr3R 22248597 intron SKIP + chr3R_5_22240001 chr3R_22240001 Sg4 2105 chr3R 22433069 22433097 chr3R 22433194 22433221 9 122 7.0 4.0 5.5 1.4 152 chr3R 22433069 intron CG13847 - chr3R 22433145 intron CG13847 - chr3R 22433221 intron CG13847 - chr3R_9_22430001 chr3R_22430001 Sg4 2106 chr3R 22437770 22437820 chr3R 22437885 22437935 14 115 0.5 2.0 1.2 6.4 165 chr3R 22437770 intergenic not near genes chr3R 22437852 intergenic not near genes chr3R 22437935 intergenic not near genes chr3R_14_22435001 chr3R_22435001 Sg4 2107 chr3R 22450527 22450573 chr3R 22453192 22453238 NOF 10 2664 2.5 7.5 5.0 1.7 2711 chr3R 22450527 intron CG34376 + chr3R 22451882 intron CG34376 + chr3R 22453238 intron CG34376 + chr3R_10_22450001 chr3R_22450001 Sg4 2108 chr3R 22538416 22538472 chr3R 22538526 22538582 13 109 3.5 3.0 3.2 3.1 166 chr3R 22538416 intron CG5326 - chr3R 22538499 intron CG5326 - chr3R 22538582 intron CG5326 - chr3R_13_22535001 chr3R_22535001 Sg4 2109 chr3R 22590752 22590795 chr3R 22590855 22590898 9 103 2.0 3.5 2.8 2.4 146 chr3R 22590752 intron Efa6 + chr3R 22590825 intron Efa6 + chr3R 22590898 intron Efa6 + chr3R_9_22590001 chr3R_22590001 Sg4 2110 chr3R 22597350 22597377 chr3R 22597452 22597472 15 99 10.0 2.5 6.2 2.1 122 chr3R 22597350 intron Efa6 + chr3R 22597411 intron Efa6 + chr3R 22597472 intron Efa6 + chr3R_15_22595001 chr3R_22595001 Sg4 2111 chr3R 22684178 22684238 chr3R 22684279 22684339 14 100 4.5 5.0 4.8 2.4 161 chr3R 22684178 intergenic not near genes chr3R 22684258 intergenic not near genes chr3R 22684339 intergenic not near genes chr3R_14_22680001 chr3R_22680001 Sg4 2112 chr3R 22769082 22769123 chr3R 22769174 22769225 11 101 1.0 2.0 1.5 4.4 143 chr3R 22769082 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769154 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769225 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R_11_22765001 chr3R_22765001 Sg4 2113 chr3R 22794508 22794548 chr3R 22794594 22794649 6 98 2.5 1.5 2.0 2.0 141 chr3R 22794508 intergenic CG7029 + chr3R 22794578 intergenic not near genes chr3R 22794649 intergenic not near genes chr3R_6_22790001 chr3R_22790001 Sg4 2114 chr3R 22803421 22803465 chr3R 22803637 22803681 16 216 5.0 6.0 5.5 2.5 260 chr3R 22803421 intergenic not near genes chr3R 22803551 intergenic not near genes chr3R 22803681 intergenic not near genes chr3R_16_22800001 chr3R_22800001 Sg4 2115 chr3R 22846769 22846801 chr3R 22847010 22847047 7 245 7.0 3.0 5.0 1.2 278 chr3R 22846769 intergenic CG4704 - chr3R 22846908 intergenic not near genes chr3R 22847047 intergenic not near genes chr3R_7_22845001 chr3R_22845001 Sg4 2116 chr3R 22860138 22860173 chr3R 22860250 22860290 10 116 2.5 8.0 5.2 1.6 152 chr3R 22860138 intergenic not near genes chr3R 22860214 intergenic not near genes chr3R 22860290 intergenic not near genes chr3R_10_22860001 chr3R_22860001 Sg4 2117 chr3R 22871411 22871461 chr3R 22871569 22871619 8 157 3.0 5.5 4.2 1.5 208 chr3R 22871411 intergenic not near genes chr3R 22871515 intergenic not near genes chr3R 22871619 intergenic not near genes chr3R_8_22870001 chr3R_22870001 Sg4 2118 chr3R 22881189 22881218 chr3R 22884920 22884948 Doc 4 3730 1.5 1.0 1.2 1.8 3759 chr3R 22881189 intergenic not near genes chr3R 22883068 intergenic not near genes chr3R 22884948 intergenic not near genes chr3R_4_22880001 chr3R_22880001 Sg4 2119 chr3R 22927670 22927723 chr3R 22927779 22927832 8 105 3.0 6.5 4.8 1.4 162 chr3R 22927670 intron klg + chr3R 22927751 intron klg + chr3R 22927832 intron klg + chr3R_8_22925001 chr3R_22925001 Sg4 2120 chr3R 22974266 22974311 chr3R 22974375 22974420 13 108 0.0 4.5 2.2 4.1 154 chr3R 22974266 intergenic not near genes chr3R 22974343 intergenic not near genes chr3R 22974420 intergenic not near genes chr3R_13_22970001 chr3R_22970001 Sg4 2121 chr3R 23005701 23005752 chr3R 23005808 23005859 15 106 5.0 5.5 5.2 2.4 158 chr3R 23005701 intron CG34375 - chr3R 23005780 intron CG34375 - chr3R 23005859 intron CG34375 - chr3R_15_23005001 chr3R_23005001 Sg4 2122 chr3R 23245964 23246015 chr3R 23246071 23246111 14 102 3.0 3.5 3.2 3.3 147 chr3R 23245964 intron CG4467 - chr3R 23246038 intron CG4467 - chr3R 23246111 intron CG4467 - chr3R_14_23245001 chr3R_23245001 Sg4 2123 chr3R 23324005 23324055 chr3R 23324116 23324166 20 111 4.5 0.5 2.5 5.7 161 chr3R 23324005 intron pnt - chr3R 23324086 intron pnt - chr3R 23324166 intron pnt - chr3R_20_23320001 chr3R_23320001 Sg4 2124 chr3R 23326066 23326106 chr3R 23327080 23327136 10 1028 12.0 12.5 12.2 0.8 1070 chr3R 23326066 intron pnt - chr3R 23326601 intron pnt - chr3R 23327136 intron pnt - chr3R_10_23325001 chr3R_23325001 Sg4 2125 chr3R 23363668 23363720 chr3R 23363986 23364038 20 318 2.5 6.5 4.5 3.6 370 chr3R 23363668 intergenic CG4408 - chr3R 23363853 intergenic CG4408 - chr3R 23364038 intergenic CG4408 - chr3R_20_23360001 chr3R_23360001 Sg4 2126 chr3R 23558377 23558429 chr3R 23560183 23560235 Bari1 11 1806 2.0 4.5 3.2 2.6 1858 chr3R 23558377 intron beat-IV + chr3R 23559306 intron beat-IV + chr3R 23560235 intron beat-IV + chr3R_11_23555001 chr3R_23555001 Sg4 2127 chr3R 23572746 23572767 chr3R 23572871 23572912 17 140 7.5 5.5 6.5 2.3 166 chr3R 23572746 intron beat-IV + chr3R 23572829 intron beat-IV + chr3R 23572912 intron beat-IV + chr3R_17_23570001 chr3R_23570001 Sg4 2128 chr3R 23600483 23600533 chr3R 23605910 23605960 14 5426 14.5 9.5 12.0 1.1 5477 chr3R 23600483 intergenic not near genes chr3R 23603222 intron CG10184 - chr3R 23605960 3` UTR CG31145 - chr3R_14_23600001 chr3R_23600001 Sg4 2129 chr3R 23648507 23648541 chr3R 23650244 23650278 7 1737 10.0 0.0 5.0 1.2 1771 chr3R 23648507 intron CG31145 - chr3R 23649392 intron CG31145 - chr3R 23650278 intron CG31145 - chr3R_7_23645001 chr3R_23645001 Sg4 2130 chr3R 23650224 23650263 chr3R 23650373 23650402 4 144 0.0 0.0 0.0 4.0 178 chr3R 23650224 intron CG31145 - chr3R 23650313 intron CG31145 - chr3R 23650402 intron CG31145 - chr3R_4_23650001 chr3R_23650001 Sg4 2131 chr3R 23684672 23684723 chr3R 23685182 23685234 roo 19 509 7.5 7.5 7.5 2.2 562 chr3R 23684672 exon CG18754 + chr3R 23684953 intron CG18754 + chr3R 23685234 exon CG18754 + chr3R_19_23680001 chr3R_23680001 Sg4 2132 chr3R 23688450 23688504 chr3R 23688566 23688620 7 110 3.5 0.0 1.8 2.5 170 chr3R 23688450 intergenic SPE + chr3R 23688535 intergenic SPE +,CG10254 - chr3R 23688620 intergenic CG10254 -,SPE + chr3R_7_23685001 chr3R_23685001 Sg4 2133 chr3R 23757076 23757121 chr3R 23757196 23757252 30 129 19.0 30.5 24.8 1.2 176 chr3R 23757076 exon Hrd3 - chr3R 23757164 intron Hrd3 - chr3R 23757252 exon Hrd3 - chr3R_30_23755001 chr3R_23755001 Sg4 2134 chr3R 23756712 23756755 chr3R 23757668 23757726 37 964 59.0 83.5 71.2 0.5 1014 chr3R 23756712 exon Hrd3 - chr3R 23757219 exon Hrd3 - chr3R 23757726 5` UTR Hrd3 - chr3R_37_23755001 chr3R_23755001 Sg4 2135 chr3R 23820615 23820657 chr3R 23820724 23820766 8 109 5.5 1.5 3.5 1.8 151 chr3R 23820615 5` UTR CG34355 + chr3R 23820690 5` UTR CG34355 + chr3R 23820766 5` UTR CG34355 + chr3R_8_23820001 chr3R_23820001 Sg4 2136 chr3R 23851062 23851083 chr3R 23858754 23858775 opus 5 7691 3.5 6.5 5.0 0.8 7713 chr3R 23851062 3` UTR CG34355 + chr3R 23854918 intergenic not near genes chr3R 23858775 intergenic not near genes chr3R_5_23850001 chr3R_23850001 Sg4 2137 chr3R 23865011 23865061 chr3R 23865120 23865175 14 113 1.5 3.5 2.5 4.0 164 chr3R 23865011 intron Pli - chr3R 23865093 intron Pli - chr3R 23865175 intron Pli - chr3R_14_23865001 chr3R_23865001 Sg4 2138 chr3R 23944900 23944936 chr3R 23944995 23945046 14 107 3.0 4.0 3.5 3.1 146 chr3R 23944900 intron CG12268 - chr3R 23944973 intron CG12268 - chr3R 23945046 exon CG12268 - chr3R_14_23940001 chr3R_23940001 Sg4 2139 chr3R 23949019 23949075 chr3R 23949121 23949177 10 102 4.0 2.5 3.2 2.4 158 chr3R 23949019 intergenic not near genes chr3R 23949098 intergenic not near genes chr3R 23949177 intergenic not near genes chr3R_10_23945001 chr3R_23945001 Sg4 2140 chr3R 24021603 24021653 chr3R 24021718 24021768 13 115 2.5 4.0 3.2 3.1 165 chr3R 24021603 intron KrT95D - chr3R 24021686 intron KrT95D - chr3R 24021768 intron KrT95D - chr3R_13_24020001 chr3R_24020001 Sg4 2141 chr3R 24042074 24042127 chr3R 24042264 24042307 17 187 3.5 6.5 5.0 2.8 233 chr3R 24042074 3` UTR spas + chr3R 24042190 3` UTR spas + chr3R 24042307 3` UTR spas + chr3R_17_24040001 chr3R_24040001 Sg4 2142 chr3R 24072063 24072074 chr3R 24072526 24072537 jockey 5 463 15.0 0.0 7.5 0.6 474 chr3R 24072063 intron 4EHP - chr3R 24072300 intron 4EHP - chr3R 24072537 intron 4EHP - chr3R_5_24070001 chr3R_24070001 Sg4 2143 chr3R 24072076 24072082 chr3R 24072524 24072525 jockey 4 449 14.0 0.0 7.0 0.5 449 chr3R 24072076 intron 4EHP - chr3R 24072300 intron 4EHP - chr3R 24072525 intron 4EHP - chr3R_4_24070001 chr3R_24070001 Sg4 2144 chr3R 24072084 24072123 chr3R 24072522 24072584 jockey 10 448 6.5 0.0 3.2 2.4 500 chr3R 24072084 intron 4EHP - chr3R 24072334 intron 4EHP - chr3R 24072584 intron 4EHP - chr3R_10_24070001 chr3R_24070001 Sg4 2145 chr3R 24076895 24076946 chr3R 24078387 24078438 hobo 10 1487 4.0 7.0 5.5 1.5 1543 chr3R 24076895 intron 4EHP - chr3R 24077666 intron 4EHP - chr3R 24078438 intron 4EHP - chr3R_10_24075001 chr3R_24075001 Sg4 2146 chr3R 24094818 24094852 chr3R 24095099 24095128 5 280 4.0 0.0 2.0 1.7 310 chr3R 24094818 intron 4EHP - chr3R 24094973 intron 4EHP - chr3R 24095128 intron 4EHP - chr3R_5_24090001 chr3R_24090001 Sg4 2147 chr3R 24100610 24100654 chr3R 24100725 24100768 11 114 4.5 3.0 3.8 2.3 158 chr3R 24100610 intron 4EHP - chr3R 24100689 intron 4EHP - chr3R 24100768 intron 4EHP - chr3R_11_24100001 chr3R_24100001 Sg4 2148 chr3R 24119850 24119901 chr3R 24120049 24120100 16 198 4.0 1.5 2.8 4.2 250 chr3R 24119850 intron Rootletin + chr3R 24119975 intron Rootletin + chr3R 24120100 intron Rootletin + chr3R_16_24115001 chr3R_24115001 Sg4 2149 chr3R 24173532 24173579 chr3R 24173639 24173686 5 107 2.5 2.5 2.5 1.4 154 chr3R 24173532 intron CG13606 + chr3R 24173609 intron CG13606 + chr3R 24173686 intron CG13606 + chr3R_5_24170001 chr3R_24170001 Sg4 2150 chr3R 24173922 24173979 chr3R 24175553 24175570 11 1616 1.5 3.5 2.5 3.1 1648 chr3R 24173922 intron CG13606 + chr3R 24174746 intron CG13606 + chr3R 24175570 intron CG13606 + chr3R_11_24170001 chr3R_24170001 Sg4 2151 chr3R 24199716 24199769 chr3R 24199821 24199869 20 104 3.0 6.0 4.5 3.6 153 chr3R 24199716 intron twin - chr3R 24199792 intron twin - chr3R 24199869 intron twin - chr3R_20_24195001 chr3R_24195001 Sg4 2152 chr3R 24207197 24207227 chr3R 24212298 24212328 flea 7 5100 7.5 6.5 7.0 0.9 5131 chr3R 24207197 intron twin - chr3R 24209762 intron twin - chr3R 24212328 intron twin - chr3R_7_24205001 chr3R_24205001 Sg4 2153 chr3R 24297221 24297274 chr3R 24298492 24298540 12 1268 4.0 7.0 5.5 1.8 1319 chr3R 24297221 intron crb + chr3R 24297880 intron crb + chr3R 24298540 intron crb + chr3R_12_24295001 chr3R_24295001 Sg4 2154 chr3R 24385851 24385895 chr3R 24385968 24386011 13 117 2.5 4.5 3.5 2.9 160 chr3R 24385851 intergenic CG5768 - chr3R 24385931 intergenic CG5768 - chr3R 24386011 intergenic CG5768 - chr3R_13_24385001 chr3R_24385001 Sg4 2155 chr3R 21907534 21907535 chr3R 24389465 24389465 6 2481930 20.0 13.5 16.8 0.3 2481931 chr3R 21907534 intergenic CG6678 + chr3R 23148500 intergenic not near genes chr3R 24389465 intron CG5768 - chr3R_6_23145001 chr3R_23145001 Sg4 2156 chr3R 24426264 24426316 chr3R 24426546 24426597 14 281 5.5 4.0 4.8 2.4 333 chr3R 24426264 intron nAChRalpha1 - chr3R 24426430 intron nAChRalpha1 - chr3R 24426597 intron nAChRalpha1 - chr3R_14_24425001 chr3R_24425001 Sg4 2157 chr3R 24431577 24431627 chr3R 24431681 24431731 13 103 3.0 0.0 1.5 5.2 154 chr3R 24431577 intron nAChRalpha1 - chr3R 24431654 intron nAChRalpha1 - chr3R 24431731 intron nAChRalpha1 - chr3R_13_24430001 chr3R_24430001 Sg4 2158 chr3R 24564807 24564829 chr3R 24567489 24567516 4 2686 7.5 11.5 9.5 0.4 2709 chr3R 24564807 intron CG13624 - chr3R 24566162 intron CG13624 - chr3R 24567516 intron CG13624 - chr3R_4_24565001 chr3R_24565001 Sg4 2159 chr3R 24844006 24844049 chr3R 24844992 24845018 11 983 6.5 12.0 9.2 1.1 1012 chr3R 24844006 intron Esp + chr3R 24844512 intron Esp + chr3R 24845018 intron Esp + chr3R_11_24840001 chr3R_24840001 Sg4 2160 chr3R 24876488 24876540 chr3R 24877064 24877116 12 576 7.0 5.0 6.0 1.7 628 chr3R 24876488 5` UTR CG3744 - chr3R 24876802 intergenic CG3744 -,CG11089 +,CG31381 + chr3R 24877116 5` UTR,5` UTR CG11089 +,CG31381 + chr3R_12_24875001 chr3R_24875001 Sg4 2161 chr3R 24912459 24912507 chr3R 24912566 24912614 9 106 3.0 4.0 3.5 2.0 155 chr3R 24912459 intergenic not near genes chr3R 24912536 intergenic CR44267 + chr3R 24912614 intergenic CR44267 + chr3R_9_24910001 chr3R_24910001 Sg4 2162 chr3R 24927107 24927158 chr3R 24931923 24931964 Doc 5 4813 3.5 6.0 4.8 0.9 4857 chr3R 24927107 intergenic Trf4-2 + chr3R 24929536 intergenic not near genes chr3R 24931964 intergenic CG11771 + chr3R_5_24925001 chr3R_24925001 Sg4 2163 chr3R 25004894 25004922 chr3R 25005002 25005030 9 108 2.0 7.0 4.5 1.6 136 chr3R 25004894 intron tnc + chr3R 25004962 intron tnc + chr3R 25005030 intron tnc + chr3R_9_25000001 chr3R_25000001 Sg4 2164 chr3R 25027518 25027567 chr3R 25027756 25027805 17 238 3.0 3.0 3.0 4.2 287 chr3R 25027518 intron Hr96 + chr3R 25027662 intron Hr96 + chr3R 25027805 intron Hr96 + chr3R_17_25025001 chr3R_25025001 Sg4 2165 chr3R 25053406 25053459 chr3R 25053508 25053561 18 102 5.5 5.5 5.5 2.8 155 chr3R 25053406 3` UTR CG31109 - chr3R 25053484 3` UTR CG31109 - chr3R 25053561 3` UTR CG31109 - chr3R_18_25050001 chr3R_25050001 Sg4 2166 chr3R 25055906 25055953 chr3R 25056135 25056182 6 229 11.0 12.0 11.5 0.5 276 chr3R 25055906 intron CG31111 - chr3R 25056044 exon CG31111 - chr3R 25056182 intergenic CG31111 -,Unc-13-4B + chr3R_6_25055001 chr3R_25055001 Sg4 2167 chr3R 25056771 25056812 chr3R 25057049 25057090 7 278 15.0 13.5 14.2 0.5 319 chr3R 25056771 intron Unc-13-4B + chr3R 25056930 intron Unc-13-4B + chr3R 25057090 intron Unc-13-4B + chr3R_7_25055001 chr3R_25055001 Sg4 2168 chr3R 25072739 25072784 chr3R 25072856 25072901 15 117 3.0 6.0 4.5 2.7 162 chr3R 25072739 3` UTR CG9996 - chr3R 25072820 3` UTR CG9996 - chr3R 25072901 exon CG9996 - chr3R_15_25070001 chr3R_25070001 Sg4 2169 chr3R 25126024 25126059 chr3R 25126643 25126678 9 619 22.5 23.5 23.0 0.4 654 chr3R 25126024 3` UTR,exon CG42503 -,Mocs2 - chr3R 25126351 3` UTR,exon CG42503 -,Mocs2 - chr3R 25126678 3` UTR,exon CG42503 -,Mocs2 - chr3R_9_25125001 chr3R_25125001 Sg4 2170 chr3R 25136375 25136428 chr3R 25136480 25136533 12 105 4.5 1.5 3.0 3.0 158 chr3R 25136375 3` UTR Bili + chr3R 25136454 3` UTR Bili + chr3R 25136533 3` UTR Bili + chr3R_12_25135001 chr3R_25135001 Sg4 2171 chr3R 25145414 25145461 chr3R 25145570 25145617 15 155 7.5 4.5 6.0 2.1 203 chr3R 25145414 intergenic not near genes chr3R 25145516 intergenic not near genes chr3R 25145617 intergenic not near genes chr3R_15_25145001 chr3R_25145001 Sg4 2172 chr3R 25159483 25159538 chr3R 25159596 25159651 12 113 2.0 2.0 2.0 4.0 168 chr3R 25159483 intergenic not near genes chr3R 25159567 intergenic not near genes chr3R 25159651 intergenic not near genes chr3R_12_25155001 chr3R_25155001 Sg4 2173 chr3R 25166236 25166365 chr3R 25166341 25166466 11 102 0.0 0.0 0.0 11.0 230 chr3R 25166236 intergenic not near genes chr3R 25166351 intergenic not near genes chr3R 25166466 intergenic not near genes chr3R_11_25165001 chr3R_25165001 Sg4 2174 chr3R 25235738 25235764 chr3R 25235917 25235943 4 179 1.0 3.5 2.2 1.2 205 chr3R 25235738 intergenic CG10420 - chr3R 25235840 intergenic CG10420 - chr3R 25235943 intergenic CG10420 - chr3R_4_25235001 chr3R_25235001 Sg4 2175 chr3R 25411763 25411803 chr3R 25411884 25411931 5 127 0.5 2.5 1.5 2.0 168 chr3R 25411763 intron Fur1 - chr3R 25411847 intron Fur1 - chr3R 25411931 intron Fur1 - chr3R_5_25410001 chr3R_25410001 Sg4 2176 chr3R 25514419 25514445 chr3R 25514525 25514551 6 103 0.0 3.0 1.5 2.4 132 chr3R 25514419 intergenic not near genes chr3R 25514485 intergenic not near genes chr3R 25514551 intergenic not near genes chr3R_6_25510001 chr3R_25510001 Sg4 2177 chr3R 25520974 25520986 chr3R 25521098 25521110 4 124 4.5 6.5 5.5 0.6 136 chr3R 25520974 intron msi + chr3R 25521042 intron msi + chr3R 25521110 intron msi + chr3R_4_25520001 chr3R_25520001 Sg4 2178 chr3R 25534977 25535015 chr3R 25535092 25535130 10 114 4.0 2.5 3.2 2.4 153 chr3R 25534977 intron msi + chr3R 25535054 intron msi + chr3R 25535130 intron msi + chr3R_10_25535001 chr3R_25535001 Sg4 2179 chr3R 25559467 25559509 chr3R 25559582 25559629 5 116 4.5 2.0 3.2 1.2 162 chr3R 25559467 intron msi + chr3R 25559548 intron msi + chr3R 25559629 intron msi + chr3R_5_25555001 chr3R_25555001 Sg4 2180 chr3R 25576816 25576858 chr3R 25576940 25576981 8 124 3.0 2.0 2.5 2.3 165 chr3R 25576816 intron msi + chr3R 25576898 intron msi + chr3R 25576981 intron msi + chr3R_8_25575001 chr3R_25575001 Sg4 2181 chr3R 25689111 25689156 chr3R 25689244 25689289 9 132 4.5 3.5 4.0 1.8 178 chr3R 25689111 intergenic not near genes chr3R 25689200 intergenic not near genes chr3R 25689289 intergenic not near genes chr3R_9_25685001 chr3R_25685001 Sg4 2182 chr3R 25725814 25725857 chr3R 25734999 25735042 roo 12 9185 5.5 3.5 4.5 2.2 9228 chr3R 25725814 intron LpR2 - chr3R 25730428 intron LpR2 - chr3R 25735042 intron LpR2 - chr3R_12_25730001 chr3R_25730001 Sg4 2183 chr3R 25832683 25832719 chr3R 25841890 25841926 roo 12 9207 5.5 6.5 6.0 1.7 9243 chr3R 25832683 exon alpha4GT2 + chr3R 25837304 intron alpha4GT2 + chr3R 25841926 exon alpha4GT2 + chr3R_12_25835001 chr3R_25835001 Sg4 2184 chr3R 25843611 25843654 chr3R 25843766 25843809 8 155 2.5 3.5 3.0 2.0 198 chr3R 25843611 intergenic CR45653 + chr3R 25843710 intergenic CR45653 + chr3R 25843809 intergenic CR45653 + chr3R_8_25840001 chr3R_25840001 Sg4 2185 chr3R 25869186 25869240 chr3R 25869405 25869459 13 219 4.5 3.0 3.8 2.7 273 chr3R 25869186 intron CG5890 + chr3R 25869322 intron CG5890 + chr3R 25869459 intron CG5890 + chr3R_13_25865001 chr3R_25865001 Sg4 2186 chr3R 25900882 25900935 chr3R 25903574 25903627 10 2692 36.0 29.5 32.8 0.3 2745 chr3R 25900882 exon CG31091 + chr3R 25902254 intergenic CG31091 +,CG31089 + chr3R 25903627 exon,intron CG31089 +,CR43259 - chr3R_10_25900001 chr3R_25900001 Sg4 2187 chr3R 26063177 26063222 chr3R 26063295 26063341 8 119 2.5 0.0 1.2 3.6 164 chr3R 26063177 intergenic CG14551 - chr3R 26063259 intergenic CG14551 - chr3R 26063341 intergenic CG14551 - chr3R_8_26060001 chr3R_26060001 Sg4 2188 chr3R 26122436 26122480 chr3R 26122537 26122581 11 101 6.5 6.5 6.5 1.5 145 chr3R 26122436 intron CG31324 + chr3R 26122508 intron CG31324 + chr3R 26122581 intron CG31324 + chr3R_11_26120001 chr3R_26120001 Sg4 2189 chr3R 26140497 26140535 chr3R 26140635 26140661 15 134 3.5 3.0 3.2 3.6 164 chr3R 26140497 intergenic not near genes chr3R 26140579 intergenic not near genes chr3R 26140661 intergenic not near genes chr3R_15_26140001 chr3R_26140001 Sg4 2190 chr3R 26144422 26144478 chr3R 26144525 26144576 16 103 3.0 2.5 2.8 4.2 154 chr3R 26144422 intergenic not near genes chr3R 26144499 intergenic not near genes chr3R 26144576 intergenic not near genes chr3R_16_26140001 chr3R_26140001 Sg4 2191 chr3R 26159679 26159739 chr3R 26159794 26159854 9 115 1.0 3.0 2.0 3.0 175 chr3R 26159679 intergenic not near genes chr3R 26159766 intergenic not near genes chr3R 26159854 intergenic not near genes chr3R_9_26155001 chr3R_26155001 Sg4 2192 chr3R 26233574 26233620 chr3R 26233853 26233899 11 279 3.0 3.0 3.0 2.8 325 chr3R 26233574 3` UTR CG12290 + chr3R 26233736 3` UTR CG12290 + chr3R 26233899 3` UTR CG12290 + chr3R_11_26230001 chr3R_26230001 Sg4 2193 chr3R 26239819 26239855 chr3R 26240155 26240191 13 336 1.5 3.0 2.2 4.1 372 chr3R 26239819 intron CR42745 + chr3R 26240005 intron CR42745 + chr3R 26240191 intron CR42745 + chr3R_13_26240001 chr3R_26240001 Sg4 2194 chr3R 26292087 26292133 chr3R 26292192 26292238 7 105 4.0 2.5 3.2 1.7 151 chr3R 26292087 intergenic not near genes chr3R 26292162 intergenic not near genes chr3R 26292238 intergenic not near genes chr3R_7_26290001 chr3R_26290001 Sg4 2195 chr3R 26294692 26294749 chr3R 26294795 26294852 14 103 3.5 2.5 3.0 3.5 160 chr3R 26294692 intergenic not near genes chr3R 26294772 intergenic not near genes chr3R 26294852 intergenic not near genes chr3R_14_26290001 chr3R_26290001 Sg4 2196 chr3R 26325673 26325709 chr3R 26325770 26325822 14 108 3.5 5.5 4.5 2.5 149 chr3R 26325673 intron CG33970 + chr3R 26325748 intron CG33970 + chr3R 26325822 intron CG33970 + chr3R_14_26325001 chr3R_26325001 Sg4 2197 chr3R 26326671 26326677 chr3R 26326774 26326780 4 103 3.0 4.5 3.8 0.8 109 chr3R 26326671 intron CG33970 + chr3R 26326726 intron CG33970 + chr3R 26326780 intron CG33970 + chr3R_4_26325001 chr3R_26325001 Sg4 2198 chr3R 26338317 26338351 chr3R 26338435 26338469 6 118 4.0 2.0 3.0 1.5 152 chr3R 26338317 intron CG33970 + chr3R 26338393 intron CG33970 + chr3R 26338469 intron CG33970 + chr3R_6_26335001 chr3R_26335001 Sg4 2199 chr3R 26349245 26349265 chr3R 26349366 26349385 4 121 3.0 0.0 1.5 1.6 140 chr3R 26349245 intron CG33970 + chr3R 26349315 intron CG33970 + chr3R 26349385 intron CG33970 + chr3R_4_26345001 chr3R_26345001 Sg4 2200 chr3R 26374821 26374857 chr3R 26374948 26374984 9 127 3.0 6.5 4.8 1.6 163 chr3R 26374821 intergenic not near genes chr3R 26374902 intergenic not near genes chr3R 26374984 intergenic not near genes chr3R_9_26370001 chr3R_26370001 Sg4 2201 chr3R 26376304 26376338 chr3R 26385488 26385522 roo 9 9184 4.0 0.5 2.2 2.8 9218 chr3R 26376304 intergenic not near genes chr3R 26380913 intergenic not near genes chr3R 26385522 intergenic not near genes chr3R_9_26380001 chr3R_26380001 Sg4 2202 chr3R 26456652 26456671 chr3R 26456718 26456774 6 97 4.0 5.0 4.5 1.1 122 chr3R 26456652 intergenic CG14237 + chr3R 26456713 intergenic CG14237 + chr3R 26456774 intergenic CG14237 + chr3R_6_26455001 chr3R_26455001 Sg4 2203 chr3R 26461502 26461527 chr3R 26461600 26461635 5 103 11.5 13.5 12.5 0.4 133 chr3R 26461502 intergenic CG5455 + chr3R 26461568 5` UTR CG5455 + chr3R 26461635 5` UTR CG5455 + chr3R_5_26460001 chr3R_26460001 Sg4 2204 chr3R 26510497 26510533 chr3R 26519577 26519613 roo 9 9079 1.5 4.5 3.0 2.2 9116 chr3R 26510497 intron plum - chr3R 26515055 intron plum - chr3R 26519613 intron,5` UTR plum -,CR45226 + chr3R_9_26515001 chr3R_26515001 Sg4 2205 chr3R 26540984 26541029 chr3R 26541089 26541133 6 103 4.0 2.5 3.2 1.4 149 chr3R 26540984 intron scrib + chr3R 26541058 intron scrib + chr3R 26541133 intron scrib + chr3R_6_26540001 chr3R_26540001 Sg4 2206 chr3R 26542019 26542078 chr3R 26542135 26542189 15 108 3.5 1.0 2.2 4.7 170 chr3R 26542019 intron scrib + chr3R 26542104 intron scrib + chr3R 26542189 intron scrib + chr3R_15_26540001 chr3R_26540001 Sg4 2207 chr3R 26546006 26546021 chr3R 26546213 26546228 4 207 3.0 6.5 4.8 0.7 222 chr3R 26546006 intron scrib + chr3R 26546117 intron scrib + chr3R 26546228 intron scrib + chr3R_4_26545001 chr3R_26545001 Sg4 2208 chr3R 26558304 26558355 chr3R 26565642 26565676 Stalker4 14 7332 3.0 3.5 3.2 3.3 7372 chr3R 26558304 intron scrib + chr3R 26561990 intron scrib + chr3R 26565676 intron scrib + chr3R_14_26560001 chr3R_26560001 Sg4 2209 chr3R 26607714 26607770 chr3R 26607815 26607871 21 99 2.0 4.5 3.2 5.0 157 chr3R 26607714 5` UTR CR44951 + chr3R 26607792 5` UTR CR44951 + chr3R 26607871 5` UTR CR44951 + chr3R_21_26605001 chr3R_26605001 Sg4 2210 chr3R 26616206 26616252 chr3R 26616320 26616355 12 113 5.0 3.5 4.2 2.3 149 chr3R 26616206 intergenic not near genes chr3R 26616280 intergenic not near genes chr3R 26616355 intergenic not near genes chr3R_12_26615001 chr3R_26615001 Sg4 2211 chr3R 26641612 26641662 chr3R 26641724 26641774 20 111 5.0 5.0 5.0 3.3 162 chr3R 26641612 intergenic not near genes chr3R 26641693 intergenic not near genes chr3R 26641774 intergenic not near genes chr3R_20_26640001 chr3R_26640001 Sg4 2212 chr3R 26642718 26642755 chr3R 26643135 26643172 jockey 6 418 6.5 3.5 5.0 1.0 454 chr3R 26642718 intergenic not near genes chr3R 26642945 intergenic not near genes chr3R 26643172 intergenic not near genes chr3R_6_26640001 chr3R_26640001 Sg4 2213 chr3R 26685836 26685848 chr3R 26686041 26686053 4 205 6.5 5.5 6.0 0.6 217 chr3R 26685836 intergenic not near genes chr3R 26685944 intergenic not near genes chr3R 26686053 intergenic not near genes chr3R_4_26685001 chr3R_26685001 Sg4 2214 chr3R 26685850 26685886 chr3R 26686035 26686088 12 203 3.5 5.5 4.5 2.2 238 chr3R 26685850 intergenic not near genes chr3R 26685969 intergenic not near genes chr3R 26686088 intergenic not near genes chr3R_12_26685001 chr3R_26685001 Sg4 2215 chr3R 26705375 26705396 chr3R 26705520 26705541 5 145 6.0 1.5 3.8 1.0 166 chr3R 26705375 intron amon - chr3R 26705458 intron amon - chr3R 26705541 intron amon - chr3R_5_26705001 chr3R_26705001 Sg4 2216 chr3R 26710811 26710856 chr3R 26710920 26710965 9 109 3.5 3.0 3.2 2.1 154 chr3R 26710811 intron amon - chr3R 26710888 intron amon - chr3R 26710965 intron amon - chr3R_9_26710001 chr3R_26710001 Sg4 2217 chr3R 26740264 26740318 chr3R 26740365 26740419 10 98 2.5 2.0 2.2 3.1 155 chr3R 26740264 intergenic not near genes chr3R 26740342 intergenic not near genes chr3R 26740419 intergenic not near genes chr3R_10_26740001 chr3R_26740001 Sg4 2218 chr3R 26753362 26753378 chr3R 26753440 26753476 10 95 5.0 5.0 5.0 1.7 114 chr3R 26753362 intergenic not near genes chr3R 26753419 intergenic not near genes chr3R 26753476 intergenic not near genes chr3R_10_26750001 chr3R_26750001 Sg4 2219 chr3R 26767339 26767396 chr3R 26767442 26767494 22 95 4.0 2.5 3.2 5.2 155 chr3R 26767339 intergenic not near genes chr3R 26767416 intergenic not near genes chr3R 26767494 intergenic not near genes chr3R_22_26765001 chr3R_26765001 Sg4 2220 chr3R 26770215 26770255 chr3R 26770317 26770357 12 100 5.0 3.5 4.2 2.3 142 chr3R 26770215 intergenic CR45563 + chr3R 26770286 intergenic CR45563 + chr3R 26770357 intergenic not near genes chr3R_12_26770001 chr3R_26770001 Sg4 2221 chr3R 26806130 26806166 chr3R 26806243 26806295 9 123 3.5 2.0 2.8 2.4 165 chr3R 26806130 intron Tl + chr3R 26806212 intron Tl + chr3R 26806295 intron Tl + chr3R_9_26805001 chr3R_26805001 Sg4 2222 chr3R 26810534 26810559 chr3R 26811038 26811062 roo 6 504 2.5 3.5 3.0 1.5 528 chr3R 26810534 intron Tl + chr3R 26810798 intron Tl + chr3R 26811062 intron Tl + chr3R_6_26810001 chr3R_26810001 Sg4 2223 chr3R 26816723 26816738 chr3R 26816841 26816856 4 118 7.5 7.0 7.2 0.5 133 chr3R 26816723 intron Tl + chr3R 26816790 intron Tl + chr3R 26816856 intron Tl + chr3R_4_26815001 chr3R_26815001 Sg4 2224 chr3R 26865004 26865059 chr3R 26866548 26866603 12 1542 23.0 15.0 19.0 0.6 1599 chr3R 26865004 exon ball - chr3R 26865804 exon ball - chr3R 26866603 5` UTR ball - chr3R_12_26865001 chr3R_26865001 Sg4 2225 chr3R 26908230 26908271 chr3R 26908411 26908453 14 181 6.0 3.0 4.5 2.5 223 chr3R 26908230 intron T48 + chr3R 26908342 intron T48 + chr3R 26908453 intron T48 + chr3R_14_26905001 chr3R_26905001 Sg4 2226 chr3R 27007381 27007437 chr3R 27016541 27016597 roo 9 9149 1.5 2.5 2.0 3.0 9216 chr3R 27007381 intron RYa-R + chr3R 27011989 intron RYa-R + chr3R 27016597 intron RYa-R + chr3R_9_27010001 chr3R_27010001 Sg4 2227 chr3R 27028698 27028743 chr3R 27028802 27028847 15 103 6.5 6.0 6.2 2.1 149 chr3R 27028698 intron RYa-R + chr3R 27028772 intron RYa-R + chr3R 27028847 intron RYa-R + chr3R_15_27025001 chr3R_27025001 Sg4 2228 chr3R 27041807 27041847 chr3R 27041922 27041962 17 115 2.0 6.0 4.0 3.4 155 chr3R 27041807 intron RYa-R + chr3R 27041884 intron RYa-R + chr3R 27041962 intron RYa-R + chr3R_17_27040001 chr3R_27040001 Sg4 2229 chr3R 27059078 27059095 chr3R 27059193 27059199 6 113 16.0 6.5 11.2 0.5 121 chr3R 27059078 exon Nep5 - chr3R 27059138 intron Nep5 - chr3R 27059199 intron Nep5 - chr3R_6_27055001 chr3R_27055001 Sg4 2230 chr3R 27059096 27059126 chr3R 27059192 27059241 9 106 7.5 6.5 7.0 1.1 145 chr3R 27059096 exon Nep5 - chr3R 27059168 intron Nep5 - chr3R 27059241 intron Nep5 - chr3R_9_27055001 chr3R_27055001 Sg4 2231 chr3R 27077077 27077126 chr3R 27077182 27077231 4 105 1.0 2.5 1.8 1.4 154 chr3R 27077077 intron CG14257 + chr3R 27077154 intron CG14257 + chr3R 27077231 intron CG14257 + chr3R_4_27075001 chr3R_27075001 Sg4 2232 chr3R 27136129 27136151 chr3R 27136623 27136650 6 498 12.0 11.5 11.8 0.5 521 chr3R 27136129 intron CG6051 - chr3R 27136390 intron CG6051 - chr3R 27136650 intron CG6051 - chr3R_6_27135001 chr3R_27135001 Sg4 2233 chr3R 27140499 27140542 chr3R 27148134 27148177 412 12 7635 5.0 4.0 4.5 2.2 7678 chr3R 27140499 intron CG6051 - chr3R 27144338 intron CG6051 - chr3R 27148177 intron CG6051 - chr3R_12_27140001 chr3R_27140001 Sg4 2234 chr3R 27329453 27329501 chr3R 27329555 27329603 10 102 0.5 1.0 0.8 5.6 150 chr3R 27329453 intergenic CG3330 - chr3R 27329528 intergenic CG3330 - chr3R 27329603 intergenic CG3330 - chr3R_10_27325001 chr3R_27325001 Sg4 2235 chr3R 27342767 27342824 chr3R 27351373 27351430 Tirant 18 8606 5.5 3.5 4.5 3.3 8663 chr3R 27342767 intron CG42534 + chr3R 27347098 intron CG42534 + chr3R 27351430 intron CG42534 + chr3R_18_27345001 chr3R_27345001 Sg4 2236 chr3R 27420147 27420176 chr3R 27420259 27420288 7 112 4.5 3.5 4.0 1.4 141 chr3R 27420147 intron side - chr3R 27420218 intron side - chr3R 27420288 intron side - chr3R_7_27420001 chr3R_27420001 Sg4 2237 chr3R 27452564 27452608 chr3R 27452769 27452813 9 205 1.5 5.0 3.2 2.1 249 chr3R 27452564 intergenic not near genes chr3R 27452688 intergenic not near genes chr3R 27452813 intergenic not near genes chr3R_9_27450001 chr3R_27450001 Sg4 2238 chr3R 27457846 27457898 chr3R 27457963 27458012 7 116 2.0 0.0 1.0 3.5 166 chr3R 27457846 intergenic not near genes chr3R 27457929 intergenic not near genes chr3R 27458012 intergenic not near genes chr3R_7_27455001 chr3R_27455001 Sg4 2239 chr3R 27492361 27492408 chr3R 27492464 27492480 11 107 2.5 1.0 1.8 3.9 119 chr3R 27492361 intergenic not near genes chr3R 27492420 intergenic not near genes chr3R 27492480 intergenic not near genes chr3R_11_27490001 chr3R_27490001 Sg4 2240 chr3R 27496566 27496602 chr3R 27496696 27496717 7 120 3.5 4.0 3.8 1.5 151 chr3R 27496566 intergenic not near genes chr3R 27496642 intergenic not near genes chr3R 27496717 intergenic not near genes chr3R_7_27495001 chr3R_27495001 Sg4 2241 chr3R 27521143 27521183 chr3R 27530377 27530417 roo 8 9233 2.5 1.5 2.0 2.7 9274 chr3R 27521143 intron CG12885 + chr3R 27525780 intron CG12885 + chr3R 27530417 intron CG12885 + chr3R_8_27525001 chr3R_27525001 Sg4 2242 chr3R 27706752 27706792 chr3R 27706854 27706894 14 102 3.5 1.5 2.5 4.0 142 chr3R 27706752 intergenic CG12428 -,CG12877 + chr3R 27706823 intergenic CG12428 -,CG12877 + chr3R 27706894 intergenic CG12428 -,CG12877 + chr3R_14_27705001 chr3R_27705001 Sg4 2243 chr3R 27718558 27718599 chr3R 27718662 27718702 12 104 2.0 6.5 4.2 2.3 144 chr3R 27718558 intergenic not near genes chr3R 27718630 intergenic not near genes chr3R 27718702 intergenic not near genes chr3R_12_27715001 chr3R_27715001 Sg4 2244 chr3R 27752740 27752790 chr3R 27753150 27753186 14 406 1.0 4.0 2.5 4.0 446 chr3R 27752740 intergenic not near genes chr3R 27752963 intergenic not near genes chr3R 27753186 intergenic not near genes chr3R_14_27750001 chr3R_27750001 Sg4 2245 chr3R 27779253 27779286 chr3R 27779349 27779391 19 100 5.5 12.0 8.8 1.9 138 chr3R 27779253 exon CG34353 - chr3R 27779322 intron CG34353 - chr3R 27779391 intron CG34353 - chr3R_19_27775001 chr3R_27775001 Sg4 2246 chr3R 27789065 27789103 chr3R 27789156 27789205 12 100 6.5 6.0 6.2 1.7 140 chr3R 27789065 exon CG34353 - chr3R 27789135 intron CG34353 - chr3R 27789205 intron CG34353 - chr3R_12_27785001 chr3R_27785001 Sg4 2247 chr3R 27799913 27799961 chr3R 27800018 27800068 19 105 2.0 2.5 2.2 5.9 155 chr3R 27799913 intron CG34353 - chr3R 27799990 intron CG34353 - chr3R 27800068 intron CG34353 - chr3R_19_27795001 chr3R_27795001 Sg4 2248 chr3R 27841095 27841138 chr3R 27841186 27841244 10 103 3.5 4.0 3.8 2.1 149 chr3R 27841095 intron CG34353 - chr3R 27841170 intron CG34353 - chr3R 27841244 intron CG34353 - chr3R_10_27840001 chr3R_27840001 Sg4 2249 chr3R 27856752 27856776 chr3R 27858249 27858284 hopper2 8 1502 5.0 1.5 3.2 1.9 1532 chr3R 27856752 intron CG34353 - chr3R 27857518 intron CG34353 - chr3R 27858284 intron CG34353 - chr3R_8_27855001 chr3R_27855001 Sg4 2250 chr3R 27862941 27862979 chr3R 27868271 27868308 Transpac 8 5329 2.0 1.5 1.8 2.9 5367 chr3R 27862941 intron CG34353 - chr3R 27865624 intron CG34353 - chr3R 27868308 intron CG34353 - chr3R_8_27865001 chr3R_27865001 Sg4 2251 chr3R 27875676 27875723 chr3R 27882756 27882803 297 13 7079 4.0 5.5 4.8 2.2 7127 chr3R 27875676 intron CG34353 - chr3R 27879240 intron CG34353 - chr3R 27882803 intron CG34353 - chr3R_13_27875001 chr3R_27875001 Sg4 2252 chr3R 27892744 27892752 chr3R 27892867 27892875 4 123 1.0 18.0 9.5 0.4 131 chr3R 27892744 intron CG34353 - chr3R 27892810 intron CG34353 - chr3R 27892875 intron CG34353 - chr3R_4_27890001 chr3R_27890001 Sg4 2253 chr3R 28035465 28035514 chr3R 28035567 28035616 4 102 3.0 2.5 2.8 1.1 151 chr3R 28035465 intron CG34362 + chr3R 28035540 intron CG34362 + chr3R 28035616 intron CG34362 + chr3R_4_28035001 chr3R_28035001 Sg4 2254 chr3R 28068483 28068524 chr3R 28073950 28073991 I-element 10 5467 0.0 4.5 2.2 3.1 5508 chr3R 28068483 intron CG34362 + chr3R 28071237 intron CG34362 + chr3R 28073991 intron CG34362 + chr3R_10_28070001 chr3R_28070001 Sg4 2255 chr3R 28091409 28091447 chr3R 28091549 28091587 9 131 4.5 7.0 5.8 1.3 178 chr3R 28091409 intergenic not near genes chr3R 28091498 intergenic not near genes chr3R 28091587 intergenic not near genes chr3R_9_28090001 chr3R_28090001 Sg4 2256 chr3R 28103300 28103359 chr3R 28103418 28103472 28 114 2.5 6.0 4.2 5.4 172 chr3R 28103300 intergenic not near genes chr3R 28103386 intergenic not near genes chr3R 28103472 intergenic not near genes chr3R_28_28100001 chr3R_28100001 Sg4 2257 chr3R 28253330 28253369 chr3R 28255860 28255904 jockey 16 2534 2.0 4.0 3.0 4.0 2574 chr3R 28253330 intergenic not near genes chr3R 28254617 intergenic not near genes chr3R 28255904 intergenic not near genes chr3R_16_28250001 chr3R_28250001 Sg4 2258 chr3R 28287756 28287798 chr3R 28288045 28288089 10 289 2.5 1.0 1.8 3.6 333 chr3R 28287756 intergenic not near genes chr3R 28287922 intergenic not near genes chr3R 28288089 intergenic not near genes chr3R_10_28285001 chr3R_28285001 Sg4 2259 chr3R 28302082 28302125 chr3R 28302546 28302589 jockey 18 464 4.5 5.5 5.0 3.0 507 chr3R 28302082 intergenic not near genes chr3R 28302336 intergenic not near genes chr3R 28302589 intergenic not near genes chr3R_18_28300001 chr3R_28300001 Sg4 2260 chr3R 28308051 28308081 chr3R 28308153 28308183 11 101 12.5 9.0 10.8 0.9 132 chr3R 28308051 intergenic not near genes chr3R 28308117 intergenic not near genes chr3R 28308183 intergenic not near genes chr3R_11_28305001 chr3R_28305001 Sg4 2261 chr3R 28331496 28331520 chr3R 28331600 28331624 7 104 1.5 4.0 2.8 1.8 128 chr3R 28331496 intron larp - chr3R 28331560 intron larp - chr3R 28331624 intron larp - chr3R_7_28330001 chr3R_28330001 Sg4 2262 chr3R 28352491 28352532 chr3R 28352856 28352897 13 365 6.5 5.0 5.8 1.9 406 chr3R 28352491 exon Or98b + chr3R 28352694 exon Or98b + chr3R 28352897 exon Or98b + chr3R_13_28350001 chr3R_28350001 Sg4 2263 chr3R 28407687 28407727 chr3R 28407798 28407838 11 111 8.0 7.0 7.5 1.3 151 chr3R 28407687 intergenic not near genes chr3R 28407762 intergenic not near genes chr3R 28407838 intergenic not near genes chr3R_11_28405001 chr3R_28405001 Sg4 2264 chr3R 28415961 28416008 chr3R 28420035 28420082 4 4074 27.0 19.0 23.0 0.2 4121 chr3R 28415961 intergenic not near genes chr3R 28418022 intergenic beat-VI + chr3R 28420082 intron beat-VI + chr3R_4_28415001 chr3R_28415001 Sg4 2265 chr3R 28576358 28576398 chr3R 28576472 28576505 13 112 4.0 6.0 5.0 2.2 147 chr3R 28576358 intergenic not near genes chr3R 28576432 intergenic not near genes chr3R 28576505 intergenic not near genes chr3R_13_28575001 chr3R_28575001 Sg4 2266 chr3R 28616463 28616500 chr3R 28616582 28616619 11 119 3.0 3.5 3.2 2.6 156 chr3R 28616463 intron CG10011 - chr3R 28616541 intron CG10011 - chr3R 28616619 intron CG10011 - chr3R_11_28615001 chr3R_28615001 Sg4 2267 chr3R 28758300 28758312 chr3R 28771332 28771344 Stalker4 4 13032 3.5 2.0 2.8 1.1 13044 chr3R 28758300 intergenic aqrs - chr3R 28764822 intergenic not near genes chr3R 28771344 intergenic not near genes chr3R_4_28760001 chr3R_28760001 Sg4 2268 chr3R 28792870 28792902 chr3R 28797970 28798012 jockey 11 5114 1.5 4.5 3.0 2.8 5142 chr3R 28792870 intergenic not near genes chr3R 28795441 intergenic not near genes chr3R 28798012 intergenic not near genes chr3R_11_28795001 chr3R_28795001 Sg4 2269 chr3R 21907534 21907536 chr3R 28831801 28831802 71 6924266 20.5 24.0 22.2 3.1 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_71_25365001 chr3R_25365001 Sg4 2270 chr3R 28971143 28971185 chr3R 28971249 28971291 6 106 5.0 2.5 3.8 1.2 148 chr3R 28971143 5` UTR CR45669 + chr3R 28971217 5` UTR CR45669 + chr3R 28971291 5` UTR CR45669 + chr3R_6_28970001 chr3R_28970001 Sg4 2271 chr3R 29023218 29023266 chr3R 29023347 29023395 9 129 3.5 2.5 3.0 2.2 177 chr3R 29023218 5` UTR CR45567 + chr3R 29023306 5` UTR CR45567 + chr3R 29023395 5` UTR CR45567 + chr3R_9_29020001 chr3R_29020001 Sg4 2272 chr3R 29070030 29070079 chr3R 29070136 29070185 15 106 7.5 4.5 6.0 2.1 155 chr3R 29070030 intron CG11873 + chr3R 29070108 intron CG11873 + chr3R 29070185 intron CG11873 + chr3R_15_29070001 chr3R_29070001 Sg4 2273 chr3R 29079384 29079407 chr3R 29080776 29080804 NOF 10 1396 3.5 8.5 6.0 1.4 1420 chr3R 29079384 intron CG11873 + chr3R 29080094 intron CG11873 + chr3R 29080804 intron CG11873 + chr3R_10_29080001 chr3R_29080001 Sg4 2274 chr3R 28949157 28949182 chr3R 29098375 29098375 4 149207 22.0 45.5 33.8 0.1 149218 chr3R 28949157 intron CG14521 - chr3R 29023766 5` UTR CR45567 + chr3R 29098375 exon CG11873 + chr3R_4_29020001 chr3R_29020001 Sg4 2275 chr3R 29213034 29213092 chr3R 29213142 29213200 40 108 7.0 8.0 7.5 4.7 166 chr3R 29213034 intergenic not near genes chr3R 29213117 intergenic not near genes chr3R 29213200 intergenic not near genes chr3R_40_29210001 chr3R_29210001 Sg4 2276 chr3R 29237256 29237536 chr3R 29239302 29239454 31 2008 29.0 18.0 23.5 1.3 2198 chr3R 29237256 exon CG11951 - chr3R 29238355 intron CG11951 - chr3R 29239454 exon CG31427 - chr3R_31_29235001 chr3R_29235001 Sg4 2277 chr3R 29239208 29239250 chr3R 29245522 29245566 8 6315 11.5 39.5 25.5 0.3 6358 chr3R 29239208 exon CG31427 - chr3R 29242387 exon CG31445 - chr3R 29245566 exon SP1029 - chr3R_8_29240001 chr3R_29240001 Sg4 2278 chr3R 29237525 29237528 chr3R 29239408 29239411 4 1883 30.0 14.0 22.0 0.2 1886 chr3R 29237525 exon CG11951 - chr3R 29238468 intron CG11951 - chr3R 29239411 exon CG31427 - chr3R_4_29235001 chr3R_29235001 Sg4 2279 chr3R 29237524 29237536 chr3R 29239413 29239425 4 1886 29.0 11.5 20.2 0.2 1901 chr3R 29237524 exon CG11951 - chr3R 29238474 intron CG11951 - chr3R 29239425 exon CG31427 - chr3R_4_29235001 chr3R_29235001 Sg4 2280 chr3R 29240291 29240345 chr3R 29240400 29240451 5 108 3.0 0.0 1.5 2.0 160 chr3R 29240291 intron CG31427 - chr3R 29240371 intergenic CG31427 -,CG31445 - chr3R 29240451 intergenic CG31427 -,CG31445 - chr3R_5_29240001 chr3R_29240001 Sg4 2281 chr3R 29256239 29256300 chr3R 29256344 29256404 41 103 10.0 11.5 10.8 3.5 165 chr3R 29256239 intergenic CG45544 +,stg - chr3R 29256322 intergenic CG45544 + chr3R 29256404 intergenic CG45544 + chr3R_41_29255001 chr3R_29255001 Sg4 2282 chr3R 29264168 29264194 chr3R 29264295 29264321 11 127 2.5 4.5 3.5 2.4 153 chr3R 29264168 intergenic not near genes chr3R 29264244 intergenic not near genes chr3R 29264321 intergenic not near genes chr3R_11_29260001 chr3R_29260001 Sg4 2283 chr3R 29282790 29282794 chr3R 29282901 29282905 4 111 15.0 11.0 13.0 0.3 115 chr3R 29282790 intergenic not near genes chr3R 29282848 intergenic not near genes chr3R 29282905 intergenic not near genes chr3R_4_29280001 chr3R_29280001 Sg4 2284 chr3R 29282796 29282819 chr3R 29282897 29282932 12 108 10.0 10.5 10.2 1.1 136 chr3R 29282796 intergenic not near genes chr3R 29282864 intergenic not near genes chr3R 29282932 intergenic not near genes chr3R_12_29280001 chr3R_29280001 Sg4 2285 chr3R 29319812 29319850 chr3R 29320156 29320179 jockey 9 342 8.0 10.5 9.2 0.9 367 chr3R 29319812 intergenic Cnx99A - chr3R 29319996 intergenic Cnx99A - chr3R 29320179 intergenic not near genes chr3R_9_29315001 chr3R_29315001 Sg4 2286 chr3R 29051934 29051978 chr3R 29326086 29326119 10 274145 37.0 23.0 30.0 0.3 274185 chr3R 29051934 exon CG11841 + chr3R 29189026 intron CG14509 - chr3R 29326119 intergenic not near genes chr3R_10_29185001 chr3R_29185001 Sg4 2287 chr3R 29406596 29406646 chr3R 29407907 29407957 jockey 10 1310 4.0 6.5 5.2 1.6 1361 chr3R 29406596 intron Ptp99A + chr3R 29407276 intron Ptp99A + chr3R 29407957 intron Ptp99A + chr3R_10_29405001 chr3R_29405001 Sg4 2288 chr3R 29412002 29412046 chr3R 29412106 29412109 5 82 3.5 7.0 5.2 0.8 107 chr3R 29412002 intron Ptp99A + chr3R 29412056 intron Ptp99A + chr3R 29412109 intron Ptp99A + chr3R_5_29410001 chr3R_29410001 Sg4 2289 chr3R 29420080 29420087 chr3R 29420194 29420201 5 114 3.5 3.0 3.2 1.2 121 chr3R 29420080 intron Ptp99A + chr3R 29420140 intron Ptp99A + chr3R 29420201 intron Ptp99A + chr3R_5_29420001 chr3R_29420001 Sg4 2290 chr3R 29447259 29447309 chr3R 29447367 29447415 11 108 4.0 4.5 4.2 2.1 156 chr3R 29447259 intron Ptp99A + chr3R 29447337 intron Ptp99A + chr3R 29447415 intron Ptp99A + chr3R_11_29445001 chr3R_29445001 Sg4 2291 chr3R 29471982 29472039 chr3R 29472100 29472152 12 115 5.5 0.5 3.0 3.0 170 chr3R 29471982 intron Ptp99A + chr3R 29472067 intron Ptp99A + chr3R 29472152 intron Ptp99A + chr3R_12_29470001 chr3R_29470001 Sg4 2292 chr3R 29526207 29526263 chr3R 29526319 29526375 12 112 1.5 4.5 3.0 3.0 168 chr3R 29526207 intergenic not near genes chr3R 29526291 intergenic not near genes chr3R 29526375 intergenic not near genes chr3R_12_29525001 chr3R_29525001 Sg4 2293 chr3R 29539406 29539429 chr3R 29539507 29539530 8 99 8.5 0.5 4.5 1.5 124 chr3R 29539406 intergenic not near genes chr3R 29539468 intergenic not near genes chr3R 29539530 intergenic not near genes chr3R_8_29535001 chr3R_29535001 Sg4 2294 chr3R 29565754 29565761 chr3R 29565857 29565864 5 103 5.5 4.0 4.8 0.9 110 chr3R 29565754 intergenic not near genes chr3R 29565809 intergenic not near genes chr3R 29565864 intergenic not near genes chr3R_5_29565001 chr3R_29565001 Sg4 2295 chr3R 29590350 29590402 chr3R 29590468 29590520 26 118 6.0 4.0 5.0 4.3 170 chr3R 29590350 exon CG31041 - chr3R 29590435 intron CG31041 - chr3R 29590520 exon CG31041 - chr3R_26_29590001 chr3R_29590001 Sg4 2296 chr3R 29592712 29592766 chr3R 29592815 29592869 11 103 3.0 1.5 2.2 3.4 157 chr3R 29592712 intron alph + chr3R 29592790 intron alph + chr3R 29592869 intron alph + chr3R_11_29590001 chr3R_29590001 Sg4 2297 chr3R 29620786 29620802 chr3R 29621472 29621488 6 686 15.5 4.0 9.8 0.6 702 chr3R 29620786 intergenic CG1907 + chr3R 29621137 intergenic CG1907 + chr3R 29621488 intergenic not near genes chr3R_6_29620001 chr3R_29620001 Sg4 2298 chr3R 29648988 29649007 chr3R 29649103 29649117 4 114 6.5 4.5 5.5 0.6 129 chr3R 29648988 intron Dop1R2 - chr3R 29649052 intron Dop1R2 - chr3R 29649117 intron Dop1R2 - chr3R_4_29645001 chr3R_29645001 Sg4 2299 chr3R 29738244 29738295 chr3R 29739736 29739787 hobo 10 1492 1.0 3.0 2.0 3.3 1543 chr3R 29738244 intergenic CG1969 +,CG7598 + chr3R 29739016 intron CG1969 + chr3R 29739787 5` UTR CG1969 + chr3R_10_29735001 chr3R_29735001 Sg4 2300 chr3R 29754942 29754987 chr3R 29755045 29755089 5 102 0.0 5.0 2.5 1.4 147 chr3R 29754942 intergenic CR44953 -,yata + chr3R 29755016 intergenic CR44953 -,yata + chr3R 29755089 intergenic CR44953 - chr3R_5_29755001 chr3R_29755001 Sg4 2301 chr3R 29758912 29758969 chr3R 29759015 29759072 19 99 8.5 4.5 6.5 2.5 160 chr3R 29758912 3` UTR CR44953 - chr3R 29758992 3` UTR CR44953 - chr3R 29759072 intergenic CR44953 - chr3R_19_29755001 chr3R_29755001 Sg4 2302 chr3R 29760335 29760387 chr3R 29761561 29761613 pogo 18 1226 4.5 2.5 3.5 4.0 1278 chr3R 29760335 intergenic not near genes chr3R 29760974 intergenic not near genes chr3R 29761613 intergenic not near genes chr3R_18_29760001 chr3R_29760001 Sg4 2303 chr3R 29783759 29783808 chr3R 29784161 29784210 6 402 8.5 22.0 15.2 0.4 451 chr3R 29783759 intron kay + chr3R 29783984 intron kay + chr3R 29784210 intron kay + chr3R_6_29780001 chr3R_29780001 Sg4 2304 chr3R 29866269 29866314 chr3R 29866373 29866410 9 105 5.5 3.5 4.5 1.6 141 chr3R 29866269 intron Zip99C - chr3R 29866340 intron Zip99C - chr3R 29866410 intron Zip99C - chr3R_9_29865001 chr3R_29865001 Sg4 2305 chr3R 29866315 29866319 chr3R 29866369 29866426 4 94 5.5 2.5 4.0 0.8 111 chr3R 29866315 intron Zip99C - chr3R 29866370 intron Zip99C - chr3R 29866426 intron Zip99C - chr3R_4_29865001 chr3R_29865001 Sg4 2306 chr3R 29881996 29882050 chr3R 29891178 29891232 roo 15 9182 4.5 4.0 4.2 2.9 9236 chr3R 29881996 intron CG31038 + chr3R 29886614 intron CG31038 + chr3R 29891232 intron CG31038 + chr3R_15_29885001 chr3R_29885001 Sg4 2307 chr3R 29950553 29950596 chr3R 29950654 29950662 18 91 3.0 3.0 3.0 4.5 109 chr3R 29950553 intergenic TkR99D - chr3R 29950608 intergenic TkR99D - chr3R 29950662 intergenic TkR99D - chr3R_18_29950001 chr3R_29950001 Sg4 2308 chr3R 29966054 29966071 chr3R 29966156 29966171 6 102 5.5 13.0 9.2 0.6 117 chr3R 29966054 intron TkR99D - chr3R 29966112 intron TkR99D - chr3R 29966171 intron TkR99D - chr3R_6_29965001 chr3R_29965001 Sg4 2309 chr3R 29976524 29976556 chr3R 29976751 29976793 5 230 6.0 4.0 5.0 0.8 269 chr3R 29976524 intergenic not near genes chr3R 29976658 intergenic not near genes chr3R 29976793 intergenic not near genes chr3R_5_29975001 chr3R_29975001 Sg4 2310 chr3R 30013651 30013695 chr3R 30013759 30013797 15 107 5.5 4.5 5.0 2.5 146 chr3R 30013651 intron CG7920 - chr3R 30013724 intron CG7920 - chr3R 30013797 intron CG7920 - chr3R_15_30010001 chr3R_30010001 Sg4 2311 chr3R 30032144 30032155 chr3R 30032246 30032259 5 104 9.5 4.0 6.8 0.6 115 chr3R 30032144 intron Axn + chr3R 30032202 intron Axn + chr3R 30032259 intron Axn + chr3R_5_30030001 chr3R_30030001 Sg4 2312 chr3R 30082964 30083012 chr3R 30083065 30083113 9 100 2.5 3.0 2.8 2.4 149 chr3R 30082964 intron sima + chr3R 30083038 intron sima + chr3R 30083113 intron sima + chr3R_9_30080001 chr3R_30080001 Sg4 2313 chr3R 30084828 30084873 chr3R 30086320 30086365 hobo 12 1492 8.5 2.0 5.2 1.9 1537 chr3R 30084828 intron sima + chr3R 30085596 intron sima + chr3R 30086365 intron sima + chr3R_12_30085001 chr3R_30085001 Sg4 2314 chr3R 30088635 30088638 chr3R 30088747 30088750 4 112 0.0 9.5 4.8 0.7 115 chr3R 30088635 intron sima + chr3R 30088692 intron sima + chr3R 30088750 intron sima + chr3R_4_30085001 chr3R_30085001 Sg4 2315 chr3R 30124945 30124978 chr3R 30125045 30125079 13 100 2.5 4.5 3.5 2.9 134 chr3R 30124945 intergenic CG45073 - chr3R 30125012 intergenic CG45073 - chr3R 30125079 intergenic CG45073 - chr3R_13_30125001 chr3R_30125001 Sg4 2316 chr3R 30136937 30136980 chr3R 30137041 30137084 16 104 7.5 8.5 8.0 1.8 147 chr3R 30136937 exon AdoR - chr3R 30137010 intron AdoR - chr3R 30137084 exon AdoR - chr3R_16_30135001 chr3R_30135001 Sg4 2317 chr3R 30156843 30156893 chr3R 30156947 30156997 15 100 5.0 4.0 4.5 2.7 154 chr3R 30156843 intron CG11498 - chr3R 30156920 intron CG11498 - chr3R 30156997 intron CG11498 - chr3R_15_30155001 chr3R_30155001 Sg4 2318 chr3R 30184207 30184216 chr3R 30184346 30184355 7 138 7.0 5.5 6.2 1.0 148 chr3R 30184207 3` UTR CR44262 - chr3R 30184281 3` UTR CR44262 - chr3R 30184355 3` UTR CR44262 - chr3R_7_30180001 chr3R_30180001 Sg4 2319 chr3R 30184217 30184260 chr3R 30184345 30184384 17 136 4.0 4.5 4.2 3.3 167 chr3R 30184217 3` UTR CR44262 - chr3R 30184300 3` UTR CR44262 - chr3R 30184384 3` UTR CR44262 - chr3R_17_30180001 chr3R_30180001 Sg4 2320 chr3R 30203365 30203374 chr3R 30203469 30203478 4 104 2.5 3.5 3.0 1.0 113 chr3R 30203365 intergenic CG9743 - chr3R 30203422 intergenic CG9743 - chr3R 30203478 intergenic CG9743 - chr3R_4_30200001 chr3R_30200001 Sg4 2321 chr3R 30238736 30238794 chr3R 30239925 30239983 1360 8 1188 1.5 1.0 1.2 3.6 1247 chr3R 30238736 intergenic not near genes chr3R 30239360 intergenic not near genes chr3R 30239983 intergenic not near genes chr3R_8_30235001 chr3R_30235001 Sg4 2322 chr3R 30252280 30252294 chr3R 30252391 30252447 5 136 5.5 2.5 4.0 1.0 167 chr3R 30252280 exon CG9682 + chr3R 30252364 exon CG9682 + chr3R 30252447 exon CG9682 + chr3R_5_30250001 chr3R_30250001 Sg4 2323 chr3R 30307114 30307144 chr3R 30307220 30307250 4 106 1.5 3.5 2.5 1.1 136 chr3R 30307114 intron hdc + chr3R 30307182 intron hdc + chr3R 30307250 intron hdc + chr3R_4_30305001 chr3R_30305001 Sg4 2324 chr3R 30317329 30317342 chr3R 30324946 30324953 roo 4 7616 0.0 1.0 0.5 2.7 7624 chr3R 30317329 intron hdc + chr3R 30321141 intron hdc + chr3R 30324953 intron hdc + chr3R_4_30320001 chr3R_30320001 Sg4 2325 chr3R 30363621 30363639 chr3R 30363757 30363775 4 136 1.5 2.5 2.0 1.3 154 chr3R 30363621 3` UTR hdc + chr3R 30363698 3` UTR hdc + chr3R 30363775 3` UTR hdc + chr3R_4_30360001 chr3R_30360001 Sg4 2326 chr3R 30396191 30396246 chr3R 30404482 30404537 roo 7 8291 1.5 3.5 2.5 2.0 8346 chr3R 30396191 intergenic not near genes chr3R 30400364 intergenic not near genes chr3R 30404537 5` UTR CR45570 + chr3R_7_30400001 chr3R_30400001 Sg4 2327 chr3R 30456367 30456408 chr3R 30456472 30456513 7 105 3.5 2.5 3.0 1.8 146 chr3R 30456367 intergenic CG2224 -,aralar1 - chr3R 30456440 3` UTR CG2224 - chr3R 30456513 3` UTR CG2224 - chr3R_7_30455001 chr3R_30455001 Sg4 2328 chr3R 30457995 30458042 chr3R 30458100 30458147 19 105 3.0 7.0 5.0 3.2 152 chr3R 30457995 intron CG2224 - chr3R 30458071 intron CG2224 - chr3R 30458147 intron CG2224 - chr3R_19_30455001 chr3R_30455001 Sg4 2329 chr3R 30461469 30461511 chr3R 30461611 30461653 13 142 7.0 3.0 5.0 2.2 184 chr3R 30461469 intron CDase + chr3R 30461561 intron CDase + chr3R 30461653 intron CDase + chr3R_13_30460001 chr3R_30460001 Sg4 2330 chr3R 30480456 30480510 chr3R 30482949 30483003 jockey 21 2493 4.5 6.5 5.5 3.2 2547 chr3R 30480456 intron PH4alphaEFB + chr3R 30481730 intron PH4alphaEFB + chr3R 30483003 intron PH4alphaEFB + chr3R_21_30480001 chr3R_30480001 Sg4 2331 chr3R 30485034 30485069 chr3R 30485135 30485170 11 101 2.0 5.0 3.5 2.4 136 chr3R 30485034 intron PH4alphaEFB + chr3R 30485102 intron PH4alphaEFB + chr3R 30485170 intron PH4alphaEFB + chr3R_11_30485001 chr3R_30485001 Sg4 2332 chr3R 30488099 30488112 chr3R 30488203 30488216 4 104 3.0 0.0 1.5 1.6 117 chr3R 30488099 intergenic Jon99Fii - chr3R 30488158 intergenic Jon99Fii - chr3R 30488216 intergenic Jon99Fii - chr3R_4_30485001 chr3R_30485001 Sg4 2333 chr3R 30505793 30505828 chr3R 30505904 30505947 4 113 0.0 3.0 1.5 1.6 154 chr3R 30505793 intergenic PH4alphaSG1 -,CG15539 + chr3R 30505870 intergenic CG15539 +,PH4alphaSG1 - chr3R 30505947 intergenic CG15539 +,PH4alphaSG1 - chr3R_4_30505001 chr3R_30505001 Sg4 2334 chr3R 30549003 30549038 chr3R 30549109 30549155 10 116 2.0 2.0 2.0 3.3 152 chr3R 30549003 intron tmod + chr3R 30549079 intron tmod + chr3R 30549155 intron tmod + chr3R_10_30545001 chr3R_30545001 Sg4 2335 chr3R 30564301 30564351 chr3R 30564409 30564459 11 105 1.5 2.5 2.0 3.7 158 chr3R 30564301 intron tmod + chr3R 30564380 intron tmod + chr3R 30564459 intron tmod + chr3R_11_30560001 chr3R_30560001 Sg4 2336 chr3R 30627583 30627635 chr3R 30627688 30627740 18 101 2.0 4.5 3.2 4.3 157 chr3R 30627583 3` UTR CG2267 - chr3R 30627662 exon CG2267 - chr3R 30627740 exon CG2267 - chr3R_18_30625001 chr3R_30625001 Sg4 2337 chr3R 30679509 30679549 chr3R 30687003 30687029 blood 8 7492 2.0 4.5 3.2 1.9 7520 chr3R 30679509 intergenic not near genes chr3R 30683269 intergenic not near genes chr3R 30687029 intergenic not near genes chr3R_8_30680001 chr3R_30680001 Sg4 2338 chr3R 30689743 30689783 chr3R 30689841 30689884 6 100 2.0 0.5 1.2 2.7 141 chr3R 30689743 intergenic not near genes chr3R 30689814 intergenic not near genes chr3R 30689884 intergenic not near genes chr3R_6_30685001 chr3R_30685001 Sg4 2339 chr3R 30747526 30747533 chr3R 30747626 30747634 4 101 3.0 4.0 3.5 0.9 108 chr3R 30747526 intergenic CR43238 - chr3R 30747580 intergenic CR43238 - chr3R 30747634 intergenic CR43238 - chr3R_4_30745001 chr3R_30745001 Sg4 2340 chr3R 30747537 30747565 chr3R 30747621 30747666 5 98 2.0 3.5 2.8 1.3 129 chr3R 30747537 intergenic CR43238 - chr3R 30747602 intergenic CR43238 - chr3R 30747666 intergenic CR43238 - chr3R_5_30745001 chr3R_30745001 Sg4 2341 chr3R 30795897 30795937 chr3R 30796240 30796280 10 341 3.0 4.0 3.5 2.2 383 chr3R 30795897 intron wts - chr3R 30796088 intron wts - chr3R 30796280 intron wts - chr3R_10_30795001 chr3R_30795001 Sg4 2342 chr3R 30799044 30799082 chr3R 30799144 30799183 19 98 7.0 3.0 5.0 3.2 139 chr3R 30799044 intron wts - chr3R 30799114 intron wts - chr3R 30799183 intron wts - chr3R_19_30795001 chr3R_30795001 Sg4 2343 chr3R 30818786 30818828 chr3R 30820376 30820418 1360 9 1589 3.0 2.5 2.8 2.4 1632 chr3R 30818786 intron cindr + chr3R 30819602 intron cindr + chr3R 30820418 intron cindr + chr3R_9_30815001 chr3R_30815001 Sg4 2344 chr3R 30982573 30982631 chr3R 30982690 30982708 16 111 1.0 7.5 4.2 3.1 135 chr3R 30982573 intron 5-HT7 - chr3R 30982640 intron 5-HT7 - chr3R 30982708 intron 5-HT7 - chr3R_16_30980001 chr3R_30980001 Sg4 2345 chr3R 30996615 30996662 chr3R 30996864 30996911 17 249 5.0 3.0 4.0 3.4 296 chr3R 30996615 intron 5-HT7 - chr3R 30996763 intron 5-HT7 - chr3R 30996911 intron 5-HT7 - chr3R_17_30995001 chr3R_30995001 Sg4 2346 chr3R 31029703 31029756 chr3R 31029809 31029862 4 106 2.0 3.0 2.5 1.1 159 chr3R 31029703 intergenic not near genes chr3R 31029782 intergenic not near genes chr3R 31029862 intergenic not near genes chr3R_4_31025001 chr3R_31025001 Sg4 2347 chr3R 31042084 31042144 chr3R 31042196 31042256 18 112 3.0 3.5 3.2 4.3 172 chr3R 31042084 intron CanA1 + chr3R 31042170 intron CanA1 + chr3R 31042256 intron CanA1 + chr3R_18_31040001 chr3R_31040001 Sg4 2348 chr3R 31074219 31074250 chr3R 31081842 31081873 springer 5 7623 5.5 4.5 5.0 0.8 7654 chr3R 31074219 intron Sox100B + chr3R 31078046 intron Sox100B + chr3R 31081873 intron Sox100B + chr3R_5_31075001 chr3R_31075001 Sg4 2349 chr3R 31167697 31167703 chr3R 31167801 31167807 5 104 0.0 0.5 0.2 4.2 110 chr3R 31167697 intron,intron Gycbeta100B +,stops - chr3R 31167752 intron,intron Gycbeta100B +,stops - chr3R 31167807 intron,intron Gycbeta100B +,stops - chr3R_5_31165001 chr3R_31165001 Sg4 2350 chr3R 31183636 31183681 chr3R 31183742 31183779 16 99 2.5 3.5 3.0 4.0 143 chr3R 31183636 intron mesh - chr3R 31183708 intron mesh - chr3R 31183779 intron mesh - chr3R_16_31180001 chr3R_31180001 Sg4 2351 chr3R 31258426 31258467 chr3R 31258728 31258769 8 301 5.0 3.0 4.0 1.6 343 chr3R 31258426 intron CG3669 + chr3R 31258598 intron CG3669 + chr3R 31258769 intron CG3669 + chr3R_8_31255001 chr3R_31255001 Sg4 2352 chr3R 31269677 31269726 chr3R 31269810 31269869 10 142 3.5 2.0 2.8 2.6 192 chr3R 31269677 intergenic not near genes chr3R 31269773 intergenic not near genes chr3R 31269869 intergenic not near genes chr3R_10_31265001 chr3R_31265001 Sg4 2353 chr3R 31274779 31274808 chr3R 31274883 31274912 5 104 6.5 2.5 4.5 0.9 133 chr3R 31274779 intergenic not near genes chr3R 31274846 intergenic not near genes chr3R 31274912 intergenic not near genes chr3R_5_31270001 chr3R_31270001 Sg4 2354 chr3R 31279349 31279396 chr3R 31285565 31285612 diver 13 6215 6.5 1.0 3.8 2.7 6263 chr3R 31279349 intergenic not near genes chr3R 31282480 intergenic not near genes chr3R 31285612 intergenic not near genes chr3R_13_31280001 chr3R_31280001 Sg4 2355 chr3R 31413069 31413083 chr3R 31418294 31418308 copia 4 5225 6.0 0.0 3.0 1.0 5239 chr3R 31413069 intron Gprk2 + chr3R 31415688 intron Gprk2 + chr3R 31418308 intron Gprk2 + chr3R_4_31415001 chr3R_31415001 Sg4 2356 chr3R 31413092 31413121 chr3R 31418290 31418315 copia 7 5209 2.5 0.0 1.2 3.2 5223 chr3R 31413092 intron Gprk2 + chr3R 31415704 intron Gprk2 + chr3R 31418315 intron Gprk2 + chr3R_7_31415001 chr3R_31415001 Sg4 2357 chr3R 31426859 31426907 chr3R 31426976 31427024 13 116 1.0 3.0 2.0 4.3 165 chr3R 31426859 intron Gprk2 + chr3R 31426942 intron Gprk2 + chr3R 31427024 intron Gprk2 + chr3R_13_31425001 chr3R_31425001 Sg4 2358 chr3R 31435338 31435385 chr3R 31435515 31435562 13 176 7.0 3.5 5.2 2.1 224 chr3R 31435338 intron Gprk2 + chr3R 31435450 intron Gprk2 + chr3R 31435562 intron Gprk2 + chr3R_13_31435001 chr3R_31435001 Sg4 2359 chr3R 31437611 31437632 chr3R 31437830 31437851 5 219 5.0 4.0 4.5 0.9 240 chr3R 31437611 intron Gprk2 + chr3R 31437731 intron Gprk2 + chr3R 31437851 intron Gprk2 + chr3R_5_31435001 chr3R_31435001 Sg4 2360 chr3R 31441528 31441561 chr3R 31441923 31441958 13 397 4.5 8.5 6.5 1.7 430 chr3R 31441528 intron Gprk2 + chr3R 31441743 intron Gprk2 + chr3R 31441958 intron Gprk2 + chr3R_13_31440001 chr3R_31440001 Sg4 2361 chr3R 31458254 31458296 chr3R 31458465 31458487 8 206 7.5 15.5 11.5 0.6 233 chr3R 31458254 intergenic lox -,Gprk2 + chr3R 31458370 intergenic lox -,Gprk2 + chr3R 31458487 3` UTR lox - chr3R_8_31455001 chr3R_31455001 Sg4 2362 chr3R 31477365 31477376 chr3R 31477538 31477569 9 186 4.0 3.5 3.8 1.9 204 chr3R 31477365 intergenic not near genes chr3R 31477467 intergenic not near genes chr3R 31477569 intergenic not near genes chr3R_9_31475001 chr3R_31475001 Sg4 2363 chr3R 31498409 31498419 chr3R 31498526 31498536 5 117 8.5 6.0 7.2 0.6 127 chr3R 31498409 intergenic not near genes chr3R 31498472 intergenic not near genes chr3R 31498536 intergenic not near genes chr3R_5_31495001 chr3R_31495001 Sg4 2364 chr3R 31558484 31558538 chr3R 31558628 31558682 30 144 4.0 3.5 3.8 6.2 198 chr3R 31558484 exon nyo + chr3R 31558583 intron nyo + chr3R 31558682 intron nyo + chr3R_30_31555001 chr3R_31555001 Sg4 2365 chr3R 31597022 31597080 chr3R 31597129 31597177 16 106 5.0 4.0 4.5 2.9 155 chr3R 31597022 3` UTR CycG - chr3R 31597100 3` UTR CycG - chr3R 31597177 3` UTR CycG - chr3R_16_31595001 chr3R_31595001 Sg4 2366 chr3R 31691515 31691559 chr3R 31696299 31696350 Doc 19 4790 4.5 7.0 5.8 2.8 4835 chr3R 31691515 intergenic not near genes chr3R 31693932 intergenic not near genes chr3R 31696350 intergenic not near genes chr3R_19_31690001 chr3R_31690001 Sg4 2367 chr3R 31723228 31723271 chr3R 31726932 31726975 6 3701 20.0 14.5 17.2 0.3 3747 chr3R 31723228 intron ttk + chr3R 31725102 intron ttk + chr3R 31726975 intron ttk + chr3R_6_31725001 chr3R_31725001 Sg4 2368 chr3R 31735074 31735122 chr3R 31735195 31735243 12 121 3.0 3.0 3.0 3.0 169 chr3R 31735074 3` UTR ttk + chr3R 31735158 3` UTR ttk + chr3R 31735243 3` UTR ttk + chr3R_12_31735001 chr3R_31735001 Sg4 2369 chr3R 31829355 31829410 chr3R 31829456 31829511 25 98 11.5 7.5 9.5 2.4 156 chr3R 31829355 intron RhoGAP100F + chr3R 31829433 intron RhoGAP100F + chr3R 31829511 intron RhoGAP100F + chr3R_25_31825001 chr3R_31825001 Sg4 2370 chr3R 31858743 31858781 chr3R 31858835 31858892 11 104 10.0 2.5 6.2 1.5 149 chr3R 31858743 intron heph - chr3R 31858818 intron heph - chr3R 31858892 intron heph - chr3R_11_31855001 chr3R_31855001 Sg4 2371 chr3R 31885651 31885702 chr3R 31885753 31885804 16 102 3.0 5.0 4.0 3.2 153 chr3R 31885651 intron heph - chr3R 31885728 intron heph - chr3R 31885804 intron heph - chr3R_16_31885001 chr3R_31885001 Sg4 2372 chr3R 31908892 31908938 chr3R 31908989 31909040 18 94 5.5 4.0 4.8 3.1 148 chr3R 31908892 intron heph - chr3R 31908966 intron heph - chr3R 31909040 intron heph - chr3R_18_31905001 chr3R_31905001 Sg4 2373 chr3R 31930860 31930898 chr3R 31930985 31931021 6 123 3.0 3.5 3.2 1.4 161 chr3R 31930860 intron heph - chr3R 31930940 intron heph - chr3R 31931021 intron heph - chr3R_6_31930001 chr3R_31930001 Sg4 2374 chr3R 31931168 31931215 chr3R 31931276 31931323 12 108 1.5 3.0 2.2 3.8 155 chr3R 31931168 intron heph - chr3R 31931246 intron heph - chr3R 31931323 intron heph - chr3R_12_31930001 chr3R_31930001 Sg4 2375 chr3R 31943110 31943153 chr3R 31943229 31943272 7 119 2.0 5.5 3.8 1.5 162 chr3R 31943110 intron heph - chr3R 31943191 intron heph - chr3R 31943272 intron heph - chr3R_7_31940001 chr3R_31940001 Sg4 2376 chr3R 31997966 31998017 chr3R 32005461 32005512 blood 11 7494 5.0 2.5 3.8 2.3 7546 chr3R 31997966 intron heph - chr3R 32001739 intron heph - chr3R 32005512 intron heph - chr3R_11_32000001 chr3R_32000001 Sg4 2377 chr4 76476 76513 chr4 81944 81981 I-element 7 5468 2.0 2.0 2.0 2.3 5505 chr4 76476 intron pan + chr4 79228 intron pan + chr4 81981 intron pan + chr4_7_75001 chr4_75001 Sg4 2378 chr4 319978 320015 chr4 328179 328215 Stalker2 5 8200 1.5 3.0 2.2 1.6 8237 chr4 319978 3` UTR CG32850 + chr4 324096 intron CG32850 + chr4 328215 3` UTR,3` UTR CG32850 +,PMCA - chr4_5_320001 chr4_320001 Sg4 2379 chr4 490355 490401 chr4 490553 490599 5 198 8.5 15.0 11.8 0.4 244 chr4 490355 intergenic not near genes chr4 490477 intergenic not near genes chr4 490599 intergenic not near genes chr4_5_490001 chr4_490001 Sg4 2380 chr4 671580 671592 chr4 680188 680200 Tirant 6 8608 26.0 8.0 17.0 0.3 8620 chr4 671580 intron CG11360 + chr4 675890 intron CG11360 + chr4 680200 intron CG11360 + chr4_6_675001 chr4_675001 Sg4 2381 chr4 671599 671630 chr4 680186 680238 Tirant 19 8605 13.5 6.5 10.0 1.7 8639 chr4 671599 intron CG11360 + chr4 675918 intron CG11360 + chr4 680238 intron CG11360 + chr4_19_675001 chr4_675001 Sg4 2382 chr4 654363 654409 chr4 699539 699585 Tirant 5 45177 20.5 21.0 20.8 0.2 45222 chr4 654363 intron gw - chr4 676974 intron CG11360 + chr4 699585 intron ey + chr4_5_675001 chr4_675001 Sg4 2383 chr4 959601 959649 chr4 959805 959853 13 204 3.0 2.5 2.8 3.4 252 chr4 959601 intergenic CR44030 +,CR45201 - chr4 959727 5` UTR CR44030 + chr4 959853 5` UTR CR44030 + chr4_13_955001 chr4_955001 Sg4 2384 chr4 972472 972527 chr4 972579 972628 7 105 0.5 1.5 1.0 3.5 156 chr4 972472 intron fuss - chr4 972550 intron fuss - chr4 972628 intron fuss - chr4_7_970001 chr4_970001 Sg4 2385 chrX 289505 289542 chrX 289631 289668 10 126 1.5 1.0 1.2 4.5 163 chrX 289505 intron,intron CG3777 +,CG13375 - chrX 289586 intron,intron CG3777 +,CG13375 - chrX 289668 intron,intron CG3777 +,CG13375 - chrX_10_285001 chrX_285001 Sg4 2386 chrX 295832 295880 chrX 303477 303525 412 4 7645 1.0 1.0 1.0 2.0 7693 chrX 295832 intron CG3777 + chrX 299678 intron CG3777 + chrX 303525 intron CG3777 + chrX_4_295001 chrX_295001 Sg4 2387 chrX 423374 423400 chrX 423743 423770 4 370 5.5 5.0 5.2 0.6 396 chrX 423374 intron CG32816 - chrX 423572 intron CG32816 - chrX 423770 intron CG32816 - chrX_4_420001 chrX_420001 Sg4 2388 chrX 428402 428446 chrX 434612 434656 3S18 6 6210 1.0 1.0 1.0 3.0 6254 chrX 428402 intron CG32816 - chrX 431529 intron CG32816 - chrX 434656 intron CG32816 - chrX_6_430001 chrX_430001 Sg4 2389 chrX 551402 551454 chrX 558989 559022 412 20 7583 2.0 2.0 2.0 6.7 7620 chrX 551402 intron Appl + chrX 555212 intron Appl + chrX 559022 intron Appl + chrX_20_555001 chrX_555001 Sg4 2390 chrX 637216 637242 chrX 637403 637450 4 203 7.0 7.5 7.2 0.5 234 chrX 637216 intron su(s) + chrX 637333 intron su(s) + chrX 637450 intron su(s) + chrX_4_635001 chrX_635001 Sg4 2391 chrX 771326 771339 chrX 792179 792192 4 20853 15.0 11.5 13.2 0.3 20866 chrX 771326 intron fz3 + chrX 781759 exon fz3 + chrX 792192 intergenic not near genes chrX_4_780001 chrX_780001 Sg4 2392 chrX 771321 771344 chrX 792198 792227 5 20873 14.0 11.0 12.5 0.4 20906 chrX 771321 intron fz3 + chrX 781774 exon fz3 + chrX 792227 intergenic not near genes chrX_5_780001 chrX_780001 Sg4 2393 chrX 802266 802310 chrX 802368 802406 6 101 4.5 3.5 4.0 1.2 140 chrX 802266 exon CG13359 - chrX 802336 exon CG13359 - chrX 802406 exon CG13359 - chrX_6_800001 chrX_800001 Sg4 2394 chrX 827579 827620 chrX 835396 835437 roo 7 7817 1.0 1.5 1.2 3.2 7858 chrX 827579 intron CG43867 - chrX 831508 intron CG43867 - chrX 835437 intron CG43867 - chrX_7_830001 chrX_830001 Sg4 2395 chrX 906690 906723 chrX 908504 908537 S-element 6 1812 5.0 4.5 4.8 1.0 1847 chrX 906690 intron CG43867 - chrX 907614 intron CG43867 - chrX 908537 intron CG43867 - chrX_6_905001 chrX_905001 Sg4 2396 chrX 1024429 1024463 chrX 1024536 1024570 8 107 0.5 3.0 1.8 2.9 141 chrX 1024429 intron,intron,intron su(w[a]) +,CG11638 -,CG32814 - chrX 1024500 intron,intron,intron su(w[a]) +,CG11638 -,CG32814 - chrX 1024570 intron,intron,intron su(w[a]) +,CG11638 -,CG32814 - chrX_8_1020001 chrX_1020001 Sg4 2397 chrX 1095293 1095340 chrX 1095401 1095448 4 108 0.5 1.5 1.0 2.0 155 chrX 1095293 intron CG3655 - chrX 1095370 intron CG3655 - chrX 1095448 intron CG3655 - chrX_4_1095001 chrX_1095001 Sg4 2398 chrX 1163277 1163321 chrX 1163380 1163424 6 103 3.0 0.5 1.8 2.1 147 chrX 1163277 intergenic CG34320 - chrX 1163350 intergenic CG34320 - chrX 1163424 intergenic CG34320 - chrX_6_1160001 chrX_1160001 Sg4 2399 chrX 1179956 1179972 chrX 1180063 1180079 5 107 2.5 4.0 3.2 1.2 123 chrX 1179956 intergenic CG11379 + chrX 1180018 intergenic CG11379 + chrX 1180079 intergenic CG11379 + chrX_5_1180001 chrX_1180001 Sg4 2400 chrX 1185548 1185591 chrX 1185652 1185695 7 104 1.5 0.5 1.0 3.5 147 chrX 1185548 intron CG14626 + chrX 1185622 intron CG14626 + chrX 1185695 intron CG14626 + chrX_7_1185001 chrX_1185001 Sg4 2401 chrX 1357764 1357805 chrX 1367959 1368000 Doc 5 10195 3.5 2.0 2.8 1.3 10236 chrX 1357764 intergenic png - chrX 1362882 intergenic not near genes chrX 1368000 intergenic not near genes chrX_5_1360001 chrX_1360001 Sg4 2402 chrX 1514004 1514008 chrX 1514458 1514468 1360 4 457 0.0 3.5 1.8 1.4 464 chrX 1514004 intron inc + chrX 1514236 intron inc + chrX 1514468 intron inc + chrX_4_1510001 chrX_1510001 Sg4 2403 chrX 1518017 1518059 chrX 1523444 1523479 jockey 7 5423 2.0 4.0 3.0 1.8 5462 chrX 1518017 intergenic inc + chrX 1520748 intergenic not near genes chrX 1523479 intergenic not near genes chrX_7_1520001 chrX_1520001 Sg4 2404 chrX 1903254 1903294 chrX 1903360 1903400 10 106 4.0 3.0 3.5 2.2 146 chrX 1903254 5` UTR CR43864 + chrX 1903327 5` UTR CR43864 + chrX 1903400 5` UTR CR43864 + chrX_10_1900001 chrX_1900001 Sg4 2405 chrX 1954863 1954916 chrX 1962828 1962871 Stalker2 6 7962 2.0 3.0 2.5 1.7 8008 chrX 1954863 intron Hr4 + chrX 1958867 intron Hr4 + chrX 1962871 intron Hr4 + chrX_6_1955001 chrX_1955001 Sg4 2406 chrX 2291615 2291660 chrX 2291723 2291775 6 109 1.5 0.5 1.0 3.0 160 chrX 2291615 intron CG2865 - chrX 2291695 intron CG2865 - chrX 2291775 intron CG2865 - chrX_6_2290001 chrX_2290001 Sg4 2407 chrX 2399823 2399866 chrX 2408190 2408223 roo 6 8367 2.5 4.0 3.2 1.4 8400 chrX 2399823 intergenic not near genes chrX 2404023 intergenic not near genes chrX 2408223 intergenic not near genes chrX_6_2400001 chrX_2400001 Sg4 2408 chrX 2429626 2429667 chrX 2429732 2429773 4 106 0.0 1.0 0.5 2.7 147 chrX 2429626 intergenic not near genes chrX 2429700 intergenic not near genes chrX 2429773 intergenic not near genes chrX_4_2425001 chrX_2425001 Sg4 2409 chrX 2524009 2524048 chrX 2564163 2564202 15 40156 33.0 30.0 31.5 0.5 40193 chrX 2524009 exon trol - chrX 2544106 intron trol - chrX 2564202 intron Pdfr + chrX_15_2540001 chrX_2540001 Sg4 2410 chrX 2578795 2578841 chrX 2578912 2578958 8 117 3.0 4.0 3.5 1.8 163 chrX 2578795 intergenic Pdfr +,Vha36-3 - chrX 2578876 intergenic Vha36-3 -,Pdfr + chrX 2578958 intergenic Vha36-3 -,Pdfr + chrX_8_2575001 chrX_2575001 Sg4 2411 chrX 2681682 2681737 chrX 2686674 2686730 4 4993 16.0 9.5 12.8 0.3 5048 chrX 2681682 5` UTR HLH3B - chrX 2684206 intergenic CR44470 - chrX 2686730 intron per + chrX_4_2680001 chrX_2680001 Sg4 2412 chrX 2803483 2803519 chrX 2803651 2803687 7 168 3.5 0.0 1.8 2.5 204 chrX 2803483 intron kirre + chrX 2803585 intron kirre + chrX 2803687 intron kirre + chrX_7_2800001 chrX_2800001 Sg4 2413 chrX 3058003 3058051 chrX 3058269 3058317 pogo 4 265 2.0 3.5 2.8 1.1 314 chrX 3058003 intron kirre + chrX 3058160 intron kirre + chrX 3058317 intron kirre + chrX_4_3055001 chrX_3055001 Sg4 2414 chrX 3109427 3109476 chrX 3109529 3109578 10 102 3.0 1.5 2.2 3.1 151 chrX 3109427 intron kirre + chrX 3109502 intron kirre + chrX 3109578 intron kirre + chrX_10_3105001 chrX_3105001 Sg4 2415 chrX 3306328 3306359 chrX 3306435 3306466 4 107 2.0 1.5 1.8 1.4 138 chrX 3306328 intron dnc + chrX 3306397 intron dnc + chrX 3306466 intron dnc + chrX_4_3305001 chrX_3305001 Sg4 2416 chrX 3493071 3493110 chrX 3502255 3502294 roo 6 9184 2.0 1.0 1.5 2.4 9223 chrX 3493071 intron,intron CR44999 +,Gas8 - chrX 3497682 intron,intron CR44999 +,Gas8 - chrX 3502294 intron,intron CR44999 +,Gas8 - chrX_6_3495001 chrX_3495001 Sg4 2417 chrX 3589493 3589502 chrX 3589587 3589613 4 107 0.0 1.0 0.5 2.7 120 chrX 3589493 intron AstA-R1 + chrX 3589553 intron AstA-R1 + chrX 3589613 intron AstA-R1 + chrX_4_3585001 chrX_3585001 Sg4 2418 chrX 3589999 3590018 chrX 3590150 3590159 4 149 2.0 5.5 3.8 0.8 160 chrX 3589999 intron AstA-R1 + chrX 3590079 intron AstA-R1 + chrX 3590159 intron AstA-R1 + chrX_4_3590001 chrX_3590001 Sg4 2419 chrX 3597087 3597107 chrX 3597198 3597220 5 112 1.0 1.0 1.0 2.5 133 chrX 3597087 intron AstA-R1 + chrX 3597154 intron AstA-R1 + chrX 3597220 intron AstA-R1 + chrX_5_3595001 chrX_3595001 Sg4 2420 chrX 3597529 3597535 chrX 3619722 3619728 roo 4 22193 6.5 2.5 4.5 0.7 22199 chrX 3597529 intron AstA-R1 + chrX 3608628 intron AstA-R1 + chrX 3619728 intron AstA-R1 + chrX_4_3605001 chrX_3605001 Sg4 2421 chrX 3726738 3726784 chrX 3730160 3730196 NOF 7 3421 1.0 0.0 0.5 4.7 3458 chrX 3726738 intron tlk + chrX 3728467 intron tlk + chrX 3730196 intron tlk + chrX_7_3725001 chrX_3725001 Sg4 2422 chrX 3881276 3881305 chrX 3881440 3881469 10 162 0.0 6.0 3.0 2.5 193 chrX 3881276 intron VhaAC39-1 + chrX 3881372 intron VhaAC39-1 + chrX 3881469 exon VhaAC39-1 + chrX_10_3880001 chrX_3880001 Sg4 2423 chrX 3915497 3915548 chrX 3915609 3915660 5 112 2.0 1.0 1.5 2.0 163 chrX 3915497 intron CG42541 - chrX 3915578 intron CG42541 - chrX 3915660 intron CG42541 - chrX_5_3915001 chrX_3915001 Sg4 2424 chrX 3950778 3950821 chrX 3950883 3950924 4 103 0.0 1.5 0.8 2.2 146 chrX 3950778 intron Vap-33A + chrX 3950851 intron Vap-33A + chrX 3950924 intron Vap-33A + chrX_4_3950001 chrX_3950001 Sg4 2425 chrX 3980856 3980887 chrX 3980958 3980989 6 102 5.5 6.5 6.0 0.9 133 chrX 3980856 intergenic not near genes chrX 3980922 intergenic not near genes chrX 3980989 intergenic not near genes chrX_6_3980001 chrX_3980001 Sg4 2426 chrX 3986843 3986862 chrX 3994501 3994519 412 7 7658 2.5 0.0 1.2 3.2 7676 chrX 3986843 intergenic not near genes chrX 3990681 intergenic not near genes chrX 3994519 intergenic not near genes chrX_7_3990001 chrX_3990001 Sg4 2427 chrX 4101849 4101897 chrX 4101953 4102002 5 103 0.0 4.5 2.2 1.6 153 chrX 4101849 exon CG15375 + chrX 4101926 exon CG15375 + chrX 4102002 exon CG15375 + chrX_5_4100001 chrX_4100001 Sg4 2428 chrX 4157874 4157917 chrX 4164952 4164995 297 4 7078 2.5 2.0 2.2 1.2 7121 chrX 4157874 intron Fas2 - chrX 4161434 intron Fas2 - chrX 4164995 intron Fas2 - chrX_4_4160001 chrX_4160001 Sg4 2429 chrX 4216315 4216333 chrX 4216419 4216437 5 104 3.5 3.0 3.2 1.2 122 chrX 4216315 intergenic not near genes chrX 4216376 intergenic CG15571 - chrX 4216437 intergenic CG15571 - chrX_5_4215001 chrX_4215001 Sg4 2430 chrX 4240159 4240199 chrX 4240311 4240351 5 149 1.5 4.5 3.0 1.2 192 chrX 4240159 intergenic not near genes chrX 4240255 intergenic not near genes chrX 4240351 intergenic not near genes chrX_5_4240001 chrX_4240001 Sg4 2431 chrX 4347671 4347682 chrX 4347769 4347789 4 105 2.5 3.5 3.0 1.0 118 chrX 4347671 intron norpA + chrX 4347730 intron norpA + chrX 4347789 intron norpA + chrX_4_4345001 chrX_4345001 Sg4 2432 chrX 4575598 4575644 chrX 4575712 4575758 10 114 0.5 2.5 1.5 4.0 160 chrX 4575598 intron CR32773 - chrX 4575678 intron CR32773 - chrX 4575758 intron CR32773 - chrX_10_4575001 chrX_4575001 Sg4 2433 chrX 4613533 4613574 chrX 4613638 4613689 13 114 3.5 2.5 3.0 3.2 156 chrX 4613533 intergenic not near genes chrX 4613611 intergenic not near genes chrX 4613689 intergenic not near genes chrX_13_4610001 chrX_4610001 Sg4 2434 chrX 4700376 4700424 chrX 4700744 4700792 jockey 4 368 1.0 1.5 1.2 1.8 416 chrX 4700376 3` UTR ctp + chrX 4700584 3` UTR ctp + chrX 4700792 3` UTR ctp + chrX_4_4700001 chrX_4700001 Sg4 2435 chrX 4723550 4723579 chrX 4723655 4723684 7 105 4.5 0.5 2.5 2.0 134 chrX 4723550 exon Proc-R + chrX 4723617 intron Proc-R + chrX 4723684 intron Proc-R + chrX_7_4720001 chrX_4720001 Sg4 2436 chrX 4763237 4763274 chrX 4763750 4763787 Stalker4 6 507 1.5 2.0 1.8 2.1 550 chrX 4763237 intergenic not near genes chrX 4763512 intergenic not near genes chrX 4763787 intergenic not near genes chrX_6_4760001 chrX_4760001 Sg4 2437 chrX 4792362 4792396 chrX 4792819 4792853 jockey 9 458 3.0 2.0 2.5 2.6 491 chrX 4792362 intergenic not near genes chrX 4792608 intergenic not near genes chrX 4792853 intergenic not near genes chrX_9_4790001 chrX_4790001 Sg4 2438 chrX 4816491 4816540 chrX 4817322 4817354 7 824 2.0 2.0 2.0 2.3 863 chrX 4816491 intergenic not near genes chrX 4816922 intergenic not near genes chrX 4817354 intergenic not near genes chrX_7_4815001 chrX_4815001 Sg4 2439 chrX 4931324 4931376 chrX 4931443 4931495 9 119 5.5 4.5 5.0 1.5 171 chrX 4931324 intron CG44774 - chrX 4931410 intron CG44774 - chrX 4931495 intron CG44774 - chrX_9_4930001 chrX_4930001 Sg4 2440 chrX 4990051 4990059 chrX 4997290 4997298 roo 4 7239 1.0 4.5 2.8 1.1 7247 chrX 4990051 intron CR44833 - chrX 4993674 intron CR44833 - chrX 4997298 intron CR44833 - chrX_4_4990001 chrX_4990001 Sg4 2441 chrX 5096260 5096304 chrX 5103849 5103887 springer 8 7586 1.0 5.5 3.2 1.9 7627 chrX 5096260 intron,intron CG15465 +,rg + chrX 5100074 intron,intron CG15465 +,rg + chrX 5103887 intron,intron CG15465 +,rg + chrX_8_5100001 chrX_5100001 Sg4 2442 chrX 5112205 5112238 chrX 5112343 5112382 5 141 0.5 0.0 0.2 4.2 177 chrX 5112205 intron,intron CG15465 +,rg + chrX 5112294 intron,intron CG15465 +,rg + chrX 5112382 intron,intron CG15465 +,rg + chrX_5_5110001 chrX_5110001 Sg4 2443 chrX 5122794 5122805 chrX 5123048 5123059 4 254 2.0 0.0 1.0 2.0 265 chrX 5122794 intron,intron CG15465 +,rg + chrX 5122926 intron,intron CG15465 +,rg + chrX 5123059 intron,intron CG15465 +,rg + chrX_4_5120001 chrX_5120001 Sg4 2444 chrX 5131372 5131428 chrX 5131478 5131508 5 96 2.0 0.0 1.0 2.5 136 chrX 5131372 intron,intron CG15465 +,rg + chrX 5131440 intron,intron CG15465 +,rg + chrX 5131508 intron,intron CG15465 +,rg + chrX_5_5130001 chrX_5130001 Sg4 2445 chrX 5338687 5338723 chrX 5339965 5339996 jockey 5 1277 3.0 2.5 2.8 1.3 1309 chrX 5338687 intergenic not near genes chrX 5339342 intergenic not near genes chrX 5339996 intergenic SK + chrX_5_5335001 chrX_5335001 Sg4 2446 chrX 5350278 5350298 chrX 5350412 5350427 4 133 1.5 3.5 2.5 1.1 149 chrX 5350278 intron SK + chrX 5350352 intron SK + chrX 5350427 intron SK + chrX_4_5350001 chrX_5350001 Sg4 2447 chrX 5441964 5442018 chrX 5442097 5442119 4 125 2.0 1.5 1.8 1.4 155 chrX 5441964 intergenic not near genes chrX 5442042 intergenic not near genes chrX 5442119 intergenic not near genes chrX_4_5440001 chrX_5440001 Sg4 2448 chrX 5473561 5473618 chrX 5473662 5473683 9 93 1.0 2.0 1.5 3.6 122 chrX 5473561 intron SPR + chrX 5473622 intron SPR + chrX 5473683 intron SPR + chrX_9_5470001 chrX_5470001 Sg4 2449 chrX 5488968 5489022 chrX 5489195 5489249 8 226 1.0 3.0 2.0 2.7 281 chrX 5488968 intron SPR + chrX 5489108 intron SPR + chrX 5489249 intron SPR + chrX_8_5485001 chrX_5485001 Sg4 2450 chrX 5727399 5727415 chrX 5732163 5732179 Doc 5 4764 1.0 2.0 1.5 2.0 4780 chrX 5727399 intron CG32758 - chrX 5729789 intron CG32758 - chrX 5732179 intron CG32758 - chrX_5_5725001 chrX_5725001 Sg4 2451 chrX 5792553 5792710 chrX 5792710 5792803 7 145 0.0 0.0 0.0 7.0 250 chrX 5792553 exon CG12239 + chrX 5792678 exon CG12239 + chrX 5792803 exon CG12239 + chrX_7_5790001 chrX_5790001 Sg4 2452 chrX 5883786 5883834 chrX 5884052 5884100 pogo 5 266 2.0 2.0 2.0 1.7 314 chrX 5883786 intron CR45668 - chrX 5883943 intron CR45668 - chrX 5884100 intron CR45668 - chrX_5_5880001 chrX_5880001 Sg4 2453 chrX 5884146 5884186 chrX 5884412 5884452 pogo 10 266 1.0 3.0 2.0 3.3 306 chrX 5884146 intron CR45668 - chrX 5884299 intron CR45668 - chrX 5884452 intron CR45668 - chrX_10_5880001 chrX_5880001 Sg4 2454 chrX 5953750 5953760 chrX 5953900 5953910 4 150 5.5 4.5 5.0 0.7 160 chrX 5953750 exon CG6048 + chrX 5953830 exon CG6048 + chrX 5953910 exon CG6048 + chrX_4_5950001 chrX_5950001 Sg4 2455 chrX 6161784 6161799 chrX 6163044 6163059 5 1259 7.0 6.0 6.5 0.7 1275 chrX 6161784 intron Ca-alpha1T - chrX 6162422 intron Ca-alpha1T - chrX 6163059 intron Ca-alpha1T - chrX_5_6160001 chrX_6160001 Sg4 2456 chrX 6171594 6171608 chrX 6179026 6179066 Quasimodo 4 7452 1.0 0.5 0.8 2.2 7472 chrX 6171594 intron Ca-alpha1T - chrX 6175330 intron Ca-alpha1T - chrX 6179066 intron Ca-alpha1T - chrX_4_6175001 chrX_6175001 Sg4 2457 chrX 6350565 6350598 chrX 6350680 6350713 8 113 2.5 4.5 3.5 1.8 148 chrX 6350565 intergenic kdn +,CG3446 - chrX 6350639 5` UTR kdn + chrX 6350713 5` UTR kdn + chrX_8_6350001 chrX_6350001 Sg4 2458 chrX 6392850 6392896 chrX 6397640 6397686 Doc 6 4790 1.5 2.0 1.8 2.1 4836 chrX 6392850 intergenic not near genes chrX 6395268 intergenic not near genes chrX 6397686 intergenic not near genes chrX_6_6395001 chrX_6395001 Sg4 2459 chrX 6487956 6487979 chrX 6488063 6488086 8 107 5.5 2.0 3.8 1.7 130 chrX 6487956 intron CG42340 - chrX 6488021 intron CG42340 - chrX 6488086 intron CG42340 - chrX_8_6485001 chrX_6485001 Sg4 2460 chrX 6509916 6509942 chrX 6510020 6510045 4 104 1.0 3.5 2.2 1.2 129 chrX 6509916 intron CG42340 - chrX 6509980 intron CG42340 - chrX 6510045 intron CG42340 - chrX_4_6505001 chrX_6505001 Sg4 2461 chrX 6562797 6562850 chrX 6571304 6571341 Tirant 14 8505 5.0 7.0 6.0 2.0 8544 chrX 6562797 intron CG34417 + chrX 6567069 intron CG34417 + chrX 6571341 intron CG34417 + chrX_14_6565001 chrX_6565001 Sg4 2462 chrX 6851724 6851762 chrX 6862613 6862650 4 10888 12.5 11.5 12.0 0.3 10926 chrX 6851724 3` UTR CG4558 + chrX 6857187 intron CG14434 - chrX 6862650 intron,5` UTR CG14434 -,CR45531 + chrX_4_6855001 chrX_6855001 Sg4 2463 chrX 6865765 6865796 chrX 6865870 6865905 7 107 3.0 3.5 3.2 1.7 140 chrX 6865765 intron CG14434 - chrX 6865835 intron CG14434 - chrX 6865905 intron CG14434 - chrX_7_6865001 chrX_6865001 Sg4 2464 chrX 6897580 6897701 chrX 6897683 6897836 8 127 0.0 0.0 0.0 8.0 256 chrX 6897580 intergenic not near genes chrX 6897708 intergenic not near genes chrX 6897836 intergenic not near genes chrX_8_6895001 chrX_6895001 Sg4 2465 chrX 6989485 6989529 chrX 6989591 6989636 10 111 2.5 1.0 1.8 3.6 151 chrX 6989485 intron ogre - chrX 6989560 intron ogre - chrX 6989636 intron ogre - chrX_10_6985001 chrX_6985001 Sg4 2466 chrX 7023576 7023624 chrX 7030991 7031039 Tabor 5 7415 5.0 1.0 3.0 1.2 7463 chrX 7023576 intron CG12541 - chrX 7027308 intron CG12541 - chrX 7031039 intron CG12541 - chrX_5_7025001 chrX_7025001 Sg4 2467 chrX 7048639 7048656 chrX 7048734 7048759 4 101 1.5 7.5 4.5 0.7 120 chrX 7048639 intron CG12541 - chrX 7048699 intron CG12541 - chrX 7048759 intron CG12541 - chrX_4_7045001 chrX_7045001 Sg4 2468 chrX 7125225 7125272 chrX 7134409 7134456 roo 4 9184 0.0 0.5 0.2 3.3 9231 chrX 7125225 intergenic not near genes chrX 7129840 intergenic not near genes chrX 7134456 intergenic not near genes chrX_4_7125001 chrX_7125001 Sg4 2469 chrX 7845700 7845750 chrX 7847216 7847266 hopper2 7 1516 4.0 1.5 2.8 1.8 1566 chrX 7845700 intergenic not near genes chrX 7846483 intergenic not near genes chrX 7847266 intergenic not near genes chrX_7_7845001 chrX_7845001 Sg4 2470 chrX 8031411 8031455 chrX 8035745 8035779 Juan 8 4333 1.0 7.5 4.2 1.5 4368 chrX 8031411 intergenic not near genes chrX 8033595 intergenic not near genes chrX 8035779 3` UTR CG2233 - chrX_8_8030001 chrX_8030001 Sg4 2471 chrX 8062411 8062457 chrX 8064096 8064142 5 1684 5.0 2.5 3.8 1.0 1731 chrX 8062411 intron mys + chrX 8063276 intron mys + chrX 8064142 exon mys + chrX_5_8060001 chrX_8060001 Sg4 2472 chrX 8092272 8092321 chrX 8092382 8092431 7 110 1.5 1.5 1.5 2.8 159 chrX 8092272 intron Ubc-E2H - chrX 8092352 intron Ubc-E2H - chrX 8092431 intron Ubc-E2H - chrX_7_8090001 chrX_8090001 Sg4 2473 chrX 8364836 8364871 chrX 8365253 8365293 BS 5 421 2.0 5.0 3.5 1.1 457 chrX 8364836 intron nAChRalpha3 - chrX 8365064 intron nAChRalpha3 - chrX 8365293 intron nAChRalpha3 - chrX_5_8365001 chrX_8365001 Sg4 2474 chrX 8506019 8506061 chrX 8506122 8506163 7 102 2.5 3.0 2.8 1.8 144 chrX 8506019 intron CG33181 + chrX 8506091 intron CG33181 + chrX 8506163 intron CG33181 + chrX_7_8505001 chrX_8505001 Sg4 2475 chrX 8506507 8506554 chrX 8506740 8506787 10 233 2.0 1.0 1.5 4.0 280 chrX 8506507 intron CG33181 + chrX 8506647 intron CG33181 + chrX 8506787 intron CG33181 + chrX_10_8505001 chrX_8505001 Sg4 2476 chrX 8605295 8605344 chrX 8605397 8605446 8 102 0.5 1.0 0.8 4.4 151 chrX 8605295 exon Caf1-180 - chrX 8605370 exon Caf1-180 - chrX 8605446 exon Caf1-180 - chrX_8_8605001 chrX_8605001 Sg4 2477 chrX 8668744 8668791 chrX 8668876 8668898 6 127 1.5 1.5 1.5 2.4 154 chrX 8668744 intergenic not near genes chrX 8668821 intergenic not near genes chrX 8668898 intergenic not near genes chrX_6_8665001 chrX_8665001 Sg4 2478 chrX 8772222 8772249 chrX 8772326 8772353 7 104 3.5 5.5 4.5 1.3 131 chrX 8772222 intron Lim1 - chrX 8772288 intron Lim1 - chrX 8772353 intron Lim1 - chrX_7_8770001 chrX_8770001 Sg4 2479 chrX 8922308 8922352 chrX 8922767 8922803 jockey 10 457 3.5 4.0 3.8 2.1 495 chrX 8922308 intron rdgA + chrX 8922556 intron rdgA + chrX 8922803 intron rdgA + chrX_10_8920001 chrX_8920001 Sg4 2480 chrX 8948748 8948786 chrX 8956283 8956321 roo 4 7535 1.5 1.5 1.5 1.6 7573 chrX 8948748 intron rdgA + chrX 8952534 intron rdgA + chrX 8956321 intron rdgA + chrX_4_8950001 chrX_8950001 Sg4 2481 chrX 9129463 9129489 chrX 9129574 9129599 4 110 3.0 3.5 3.2 1.0 136 chrX 9129463 intron fend - chrX 9129531 intron fend - chrX 9129599 intron fend - chrX_4_9125001 chrX_9125001 Sg4 2482 chrX 9229890 9229927 chrX 9229995 9230032 5 102 6.5 3.5 5.0 0.8 142 chrX 9229890 intron CG12121 - chrX 9229961 intron CG12121 - chrX 9230032 intron CG12121 - chrX_5_9225001 chrX_9225001 Sg4 2483 chrX 9337921 9337965 chrX 9338038 9338082 12 117 2.5 2.0 2.2 3.8 161 chrX 9337921 intron CG34449 - chrX 9338002 intron CG34449 - chrX 9338082 exon CG34449 - chrX_12_9335001 chrX_9335001 Sg4 2484 chrX 9508116 9508160 chrX 9509659 9509703 jockey 7 1543 3.5 2.5 3.0 1.8 1587 chrX 9508116 intron CG32700 - chrX 9508910 intron CG32700 - chrX 9509703 intron CG32700 - chrX_7_9505001 chrX_9505001 Sg4 2485 chrX 9575770 9575819 chrX 9576119 9576168 mdg3 5 347 4.5 0.5 2.5 1.4 398 chrX 9575770 intron,exon CG32699 -,CG42395 - chrX 9575969 intron,intron CG32699 -,CG42395 - chrX 9576168 intron,5` UTR CG32699 -,CG42395 - chrX_5_9575001 chrX_9575001 Sg4 2486 chrX 9599150 9599196 chrX 9599253 9599299 11 103 2.0 2.0 2.0 3.7 149 chrX 9599150 intergenic not near genes chrX 9599224 intergenic not near genes chrX 9599299 intergenic not near genes chrX_11_9595001 chrX_9595001 Sg4 2487 chrX 9837810 9837860 chrX 9839730 9839764 6 1916 14.5 12.0 13.2 0.4 1954 chrX 9837810 intron CG32698 + chrX 9838787 intron CG32698 + chrX 9839764 intron CG32698 + chrX_6_9835001 chrX_9835001 Sg4 2488 chrX 9923372 9923422 chrX 9923488 9923538 9 113 0.5 2.0 1.2 4.1 166 chrX 9923372 intergenic not near genes chrX 9923455 intergenic not near genes chrX 9923538 intergenic not near genes chrX_9_9920001 chrX_9920001 Sg4 2489 chrX 10151910 10151937 chrX 10152012 10152039 4 102 1.5 1.5 1.5 1.6 129 chrX 10151910 intron CR44894 - chrX 10151974 intron CR44894 - chrX 10152039 intron CR44894 - chrX_4_10150001 chrX_10150001 Sg4 2490 chrX 10154260 10154304 chrX 10154361 10154405 4 101 1.0 2.0 1.5 1.6 145 chrX 10154260 intron,intron CR44894 -,CG12645 + chrX 10154332 intron,intron CR44894 -,CG12645 + chrX 10154405 intron,exon CR44894 -,CG12645 + chrX_4_10150001 chrX_10150001 Sg4 2491 chrX 10267302 10267324 chrX 10276476 10276499 roo 5 9175 0.0 0.5 0.2 4.2 9197 chrX 10267302 3` UTR alpha-Man-I - chrX 10271900 intron alpha-Man-I - chrX 10276499 3` UTR alpha-Man-I - chrX_5_10270001 chrX_10270001 Sg4 2492 chrX 10285865 10285872 chrX 10286226 10286233 4 361 5.0 1.0 3.0 1.0 368 chrX 10285865 intron alpha-Man-I - chrX 10286049 intron alpha-Man-I - chrX 10286233 intron alpha-Man-I - chrX_4_10285001 chrX_10285001 Sg4 2493 chrX 10343442 10343501 chrX 10343659 10343718 6 217 2.5 2.0 2.2 1.9 276 chrX 10343442 intron CG43740 + chrX 10343580 intron CG43740 + chrX 10343718 intron CG43740 + chrX_6_10340001 chrX_10340001 Sg4 2494 chrX 10361725 10361735 chrX 10361847 10361857 4 122 1.5 4.0 2.8 1.1 132 chrX 10361725 intron l(1)G0289 - chrX 10361791 intron l(1)G0289 - chrX 10361857 intron l(1)G0289 - chrX_4_10360001 chrX_10360001 Sg4 2495 chrX 10550318 10550363 chrX 10550421 10550466 6 103 2.0 1.0 1.5 2.4 148 chrX 10550318 intron spri - chrX 10550392 intron spri - chrX 10550466 intron spri - chrX_6_10550001 chrX_10550001 Sg4 2496 chrX 10550835 10550880 chrX 10552327 10552372 hobo 7 1492 1.5 1.5 1.5 2.8 1537 chrX 10550835 intron spri - chrX 10551604 intron spri - chrX 10552372 intron spri - chrX_7_10550001 chrX_10550001 Sg4 2497 chrX 10686029 10686082 chrX 10691188 10691244 roo 9 5161 1.5 0.5 1.0 4.5 5215 chrX 10686029 intron X11Lbeta + chrX 10688636 intron X11Lbeta + chrX 10691244 intron X11Lbeta + chrX_9_10685001 chrX_10685001 Sg4 2498 chrX 10772649 10772696 chrX 10772757 10772803 Tirant 9 106 2.0 2.5 2.2 2.8 154 chrX 10772649 intron CG15211 + chrX 10772726 intron CG15211 + chrX 10772803 intron CG15211 + chrX_9_10770001 chrX_10770001 Sg4 2499 chrX 10876595 10876650 chrX 10876699 10876753 5 101 0.5 3.0 1.8 1.8 158 chrX 10876595 intron CG1637 - chrX 10876674 intron CG1637 - chrX 10876753 intron CG1637 - chrX_5_10875001 chrX_10875001 Sg4 2500 chrX 11095975 11096023 chrX 11103102 11103150 HMS-Beagle 8 7127 1.5 1.5 1.5 3.2 7175 chrX 11095975 intergenic not near genes chrX 11099562 intergenic not near genes chrX 11103150 intron CG42249 + chrX_8_11095001 chrX_11095001 Sg4 2501 chrX 11142056 11142067 chrX 11142157 11142168 4 101 0.0 3.0 1.5 1.6 112 chrX 11142056 intergenic CG15199 -,CG15202 + chrX 11142112 intergenic CG15199 -,CG15202 + chrX 11142168 intergenic CG15199 -,CG15202 + chrX_4_11140001 chrX_11140001 Sg4 2502 chrX 11184228 11184277 chrX 11189329 11189378 flea 4 5101 3.5 2.0 2.8 1.1 5150 chrX 11184228 intergenic not near genes chrX 11186803 intergenic not near genes chrX 11189378 intergenic not near genes chrX_4_11185001 chrX_11185001 Sg4 2503 chrX 11191880 11191905 chrX 11191983 11192007 4 103 1.5 4.0 2.8 1.1 127 chrX 11191880 intergenic not near genes chrX 11191944 intergenic not near genes chrX 11192007 intergenic not near genes chrX_4_11190001 chrX_11190001 Sg4 2504 chrX 11312042 11312081 chrX 11319420 11319444 Stalker2 6 7370 2.0 4.0 3.0 1.5 7402 chrX 11312042 intergenic not near genes chrX 11315743 intergenic not near genes chrX 11319444 intergenic not near genes chrX_6_11315001 chrX_11315001 Sg4 2505 chrX 11384550 11384560 chrX 11384814 11384824 4 264 5.5 5.5 5.5 0.6 274 chrX 11384550 intron dlg1 + chrX 11384687 intron dlg1 + chrX 11384824 intron dlg1 + chrX_4_11380001 chrX_11380001 Sg4 2506 chrX 11384573 11384583 chrX 11384806 11384846 4 256 5.0 4.5 4.8 0.7 273 chrX 11384573 intron dlg1 + chrX 11384710 intron dlg1 + chrX 11384846 intron dlg1 + chrX_4_11380001 chrX_11380001 Sg4 2507 chrX 11633400 11633446 chrX 11640479 11640525 297 7 7079 4.5 3.5 4.0 1.4 7125 chrX 11633400 intron Ptp10D + chrX 11636962 intron Ptp10D + chrX 11640525 intron Ptp10D + chrX_7_11635001 chrX_11635001 Sg4 2508 chrX 11645092 11645134 chrX 11648286 11648329 NOF 4 3194 1.0 1.0 1.0 2.0 3237 chrX 11645092 intron Ptp10D + chrX 11646710 intron Ptp10D + chrX 11648329 intron Ptp10D + chrX_4_11645001 chrX_11645001 Sg4 2509 chrX 11648965 11649001 chrX 11649071 11649082 4 100 2.0 3.5 2.8 1.1 117 chrX 11648965 intron Ptp10D + chrX 11649024 intron Ptp10D + chrX 11649082 intron Ptp10D + chrX_4_11645001 chrX_11645001 Sg4 2510 chrX 11922343 11922382 chrX 11922501 11922540 4 156 1.5 0.0 0.8 2.2 197 chrX 11922343 exon Sclp - chrX 11922442 intron Sclp - chrX 11922540 intron Sclp - chrX_4_11920001 chrX_11920001 Sg4 2511 chrX 11936552 11936590 chrX 11936676 11936714 11 124 0.0 3.5 1.8 3.9 162 chrX 11936552 intron cac - chrX 11936633 intron cac - chrX 11936714 exon cac - chrX_11_11935001 chrX_11935001 Sg4 2512 chrX 12069046 12069086 chrX 12069158 12069196 10 110 2.0 3.5 2.8 2.6 150 chrX 12069046 intron,intron,3` UTR CR43960 +,Ten-a +,CR43961 - chrX 12069121 intron,intron,3` UTR CR43960 +,Ten-a +,CR43961 - chrX 12069196 intron,intron,3` UTR CR43960 +,Ten-a +,CR43961 - chrX_10_12065001 chrX_12065001 Sg4 2513 chrX 12094020 12094068 chrX 12094137 12094174 7 115 0.5 2.0 1.2 3.2 154 chrX 12094020 intron,intron CR43960 +,Ten-a + chrX 12094097 intron,intron CR43960 +,Ten-a + chrX 12094174 intron,intron CR43960 +,Ten-a + chrX_7_12090001 chrX_12090001 Sg4 2514 chrX 12168119 12168153 chrX 12173586 12173620 I-element 10 5466 1.0 4.5 2.8 2.6 5501 chrX 12168119 intron Ten-a + chrX 12170870 intron Ten-a + chrX 12173620 intron Ten-a + chrX_10_12170001 chrX_12170001 Sg4 2515 chrX 12350749 12350767 chrX 12350855 12350872 4 106 4.5 0.0 2.2 1.2 123 chrX 12350749 intergenic not near genes chrX 12350810 intergenic not near genes chrX 12350872 intergenic not near genes chrX_4_12350001 chrX_12350001 Sg4 2516 chrX 12521084 12521130 chrX 12521198 12521244 14 108 3.0 5.5 4.2 2.7 160 chrX 12521084 exon CG43921 - chrX 12521164 exon CG43921 - chrX 12521244 exon CG43921 - chrX_14_12520001 chrX_12520001 Sg4 2517 chrX 12557129 12557159 chrX 12557230 12557259 4 99 2.5 0.5 1.5 1.6 130 chrX 12557129 intron CG43921 - chrX 12557194 intron CG43921 - chrX 12557259 intron CG43921 - chrX_4_12555001 chrX_12555001 Sg4 2518 chrX 12681040 12681089 chrX 12681143 12681192 7 103 0.5 1.0 0.8 3.9 152 chrX 12681040 3` UTR Tis11 + chrX 12681116 3` UTR Tis11 + chrX 12681192 3` UTR Tis11 + chrX_7_12680001 chrX_12680001 Sg4 2519 chrX 12930576 12930605 chrX 12937717 12937746 HMS-Beagle 4 7141 2.0 7.0 4.5 0.7 7170 chrX 12930576 intron fne + chrX 12934161 intron fne + chrX 12937746 intron fne + chrX_4_12930001 chrX_12930001 Sg4 2520 chrX 12996393 12996430 chrX 12996495 12996531 4 99 2.0 2.0 2.0 1.3 138 chrX 12996393 intron rad + chrX 12996462 intron rad + chrX 12996531 intron rad + chrX_4_12995001 chrX_12995001 Sg4 2521 chrX 13015014 13015045 chrX 13015219 13015248 4 204 1.5 2.5 2.0 1.3 234 chrX 13015014 intron rad + chrX 13015131 intron rad + chrX 13015248 intron rad + chrX_4_13015001 chrX_13015001 Sg4 2522 chrX 13061331 13061371 chrX 13061467 13061507 7 135 0.0 1.0 0.5 4.7 176 chrX 13061331 intron rad + chrX 13061419 intron rad + chrX 13061507 intron rad + chrX_7_13060001 chrX_13060001 Sg4 2523 chrX 13128656 13128705 chrX 13128821 13128870 4 165 9.0 4.5 6.8 0.5 214 chrX 13128656 5` UTR CG32638 - chrX 13128763 5` UTR CG32638 - chrX 13128870 intergenic CG32638 -,CG15717 +,MFS10 +,snmRNA:204 - chrX_4_13125001 chrX_13125001 Sg4 2524 chrX 13146572 13146624 chrX 13146685 13146737 5 113 1.0 1.5 1.2 2.3 165 chrX 13146572 intron CG32645 + chrX 13146654 intron CG32645 + chrX 13146737 intron CG32645 + chrX_5_13145001 chrX_13145001 Sg4 2525 chrX 13172334 13172359 chrX 13172435 13172460 7 101 1.5 3.5 2.5 2.0 126 chrX 13172334 exon CG34411 - chrX 13172397 intron CG34411 - chrX 13172460 intron CG34411 - chrX_7_13170001 chrX_13170001 Sg4 2526 chrX 13401475 13401519 chrX 13401852 13401896 jockey 4 377 1.0 1.5 1.2 1.8 421 chrX 13401475 intergenic CG1673 +,CG12725 - chrX 13401686 intergenic CG12725 -,CG1673 + chrX 13401896 3` UTR CG12725 - chrX_4_13400001 chrX_13400001 Sg4 2527 chrX 13429457 13429485 chrX 13430631 13430659 jockey 5 1174 1.0 1.0 1.0 2.5 1202 chrX 13429457 intergenic not near genes chrX 13430058 intergenic not near genes chrX 13430659 intergenic not near genes chrX_5_13430001 chrX_13430001 Sg4 2528 chrX 13438751 13438757 chrX 13438856 13438873 6 112 4.5 4.5 4.5 1.1 122 chrX 13438751 intergenic not near genes chrX 13438812 intergenic not near genes chrX 13438873 intergenic not near genes chrX_6_13435001 chrX_13435001 Sg4 2529 chrX 13442122 13442168 chrX 13442238 13442284 9 116 0.0 0.5 0.2 7.5 162 chrX 13442122 intergenic not near genes chrX 13442203 intergenic not near genes chrX 13442284 intergenic not near genes chrX_9_13440001 chrX_13440001 Sg4 2530 chrX 13463624 13463676 chrX 13469226 13469278 mdg3 11 5602 1.5 2.0 1.8 3.9 5654 chrX 13463624 intron Neto + chrX 13466451 intron Neto + chrX 13469278 intron Neto + chrX_11_13465001 chrX_13465001 Sg4 2531 chrX 13697996 13698027 chrX 13698658 13698700 6 670 1.0 2.0 1.5 2.4 704 chrX 13697996 intron,intron CG9940 -,NnaD + chrX 13698348 intron,intron CG9940 -,NnaD + chrX 13698700 intron,intron CG9940 -,NnaD + chrX_6_13695001 chrX_13695001 Sg4 2532 chrX 13734073 13734103 chrX 13734194 13734224 9 120 4.0 3.5 3.8 1.9 151 chrX 13734073 intron g - chrX 13734148 intron g - chrX 13734224 intron g - chrX_9_13730001 chrX_13730001 Sg4 2533 chrX 13791952 13791990 chrX 13793141 13793179 4 1189 2.5 5.0 3.8 0.8 1227 chrX 13791952 intron inaE + chrX 13792566 intron inaE + chrX 13793179 intron inaE + chrX_4_13790001 chrX_13790001 Sg4 2534 chrX 13821450 13821470 chrX 13821552 13821572 4 102 2.0 2.0 2.0 1.3 122 chrX 13821450 intron Clic - chrX 13821511 intron Clic - chrX 13821572 intron Clic - chrX_4_13820001 chrX_13820001 Sg4 2535 chrX 13935507 13935519 chrX 13935615 13935627 4 108 1.5 7.0 4.2 0.8 120 chrX 13935507 intron mamo - chrX 13935567 intron mamo - chrX 13935627 intron mamo - chrX_4_13935001 chrX_13935001 Sg4 2536 chrX 13937968 13937995 chrX 13941264 13941291 I-element 5 3296 1.0 3.5 2.2 1.6 3323 chrX 13937968 intron mamo - chrX 13939630 intron mamo - chrX 13941291 intron mamo - chrX_5_13935001 chrX_13935001 Sg4 2537 chrX 14023131 14023144 chrX 14023249 14023262 5 118 0.5 4.5 2.5 1.4 131 chrX 14023131 intergenic not near genes chrX 14023196 intergenic not near genes chrX 14023262 intergenic not near genes chrX_5_14020001 chrX_14020001 Sg4 2538 chrX 14105002 14105044 chrX 14114178 14114220 roo 7 9176 3.0 5.5 4.2 1.3 9218 chrX 14105002 intergenic not near genes chrX 14109611 intergenic not near genes chrX 14114220 5` UTR CR44657 + chrX_7_14105001 chrX_14105001 Sg4 2539 chrX 14131454 14131518 chrX 14131567 14131624 8 105 0.5 3.5 2.0 2.7 170 chrX 14131454 intergenic not near genes chrX 14131539 intergenic not near genes chrX 14131624 intergenic not near genes chrX_8_14130001 chrX_14130001 Sg4 2540 chrX 14450072 14450129 chrX 14450247 14450304 9 175 1.5 3.0 2.2 2.8 232 chrX 14450072 intron dpr8 + chrX 14450188 intron dpr8 + chrX 14450304 intron dpr8 + chrX_9_14450001 chrX_14450001 Sg4 2541 chrX 14560255 14560301 chrX 14560364 14560410 8 109 2.0 4.0 3.0 2.0 155 chrX 14560255 intergenic not near genes chrX 14560332 intergenic not near genes chrX 14560410 intergenic not near genes chrX_8_14560001 chrX_14560001 Sg4 2542 chrX 14716821 14716874 chrX 14717187 14717224 8 360 1.5 2.0 1.8 2.9 403 chrX 14716821 intron NetB - chrX 14717022 intron NetB - chrX 14717224 intron NetB - chrX_8_14715001 chrX_14715001 Sg4 2543 chrX 14774958 14774978 chrX 14775060 14775079 4 102 2.0 1.0 1.5 1.6 121 chrX 14774958 intergenic CG5334 + chrX 14775018 intergenic CG5334 + chrX 14775079 intergenic CG5334 + chrX_4_14775001 chrX_14775001 Sg4 2544 chrX 14778017 14778052 chrX 14782839 14782874 Doc 5 4822 1.5 1.5 1.5 2.0 4857 chrX 14778017 intergenic CG5347 + chrX 14780446 intergenic not near genes chrX 14782874 intergenic Ag5r2 - chrX_5_14780001 chrX_14780001 Sg4 2545 chrX 14805528 14805549 chrX 14806758 14806779 4 1230 7.5 3.5 5.5 0.6 1251 chrX 14805528 intron rut - chrX 14806154 intron rut - chrX 14806779 intron rut - chrX_4_14805001 chrX_14805001 Sg4 2546 chrX 14818740 14818793 chrX 14823969 14824022 copia 5 5229 4.0 4.0 4.0 1.0 5282 chrX 14818740 intron rut - chrX 14821381 intron rut - chrX 14824022 intron rut - chrX_5_14820001 chrX_14820001 Sg4 2547 chrX 14936839 14936886 chrX 14946121 14946168 roo 5 9282 1.0 1.0 1.0 2.5 9329 chrX 14936839 intron pdgy - chrX 14941504 intron pdgy - chrX 14946168 intron pdgy - chrX_5_14940001 chrX_14940001 Sg4 2548 chrX 14968048 14968097 chrX 14968152 14968201 8 104 0.0 0.5 0.2 6.7 153 chrX 14968048 intron eag + chrX 14968124 intron eag + chrX 14968201 intron eag + chrX_8_14965001 chrX_14965001 Sg4 2549 chrX 14976496 14976550 chrX 14976963 14977017 14 465 0.5 1.5 1.0 7.0 521 chrX 14976496 intron eag + chrX 14976756 intron eag + chrX 14977017 intron eag + chrX_14_14975001 chrX_14975001 Sg4 2550 chrX 14981707 14981738 chrX 14981811 14981842 4 104 0.5 1.0 0.8 2.2 135 chrX 14981707 intron eag + chrX 14981774 intron eag + chrX 14981842 intron eag + chrX_4_14980001 chrX_14980001 Sg4 2551 chrX 15127255 15127294 chrX 15127366 15127405 10 111 2.0 2.0 2.0 3.3 150 chrX 15127255 intron drd + chrX 15127330 intron drd + chrX 15127405 intron drd + chrX_10_15125001 chrX_15125001 Sg4 2552 chrX 15208503 15208553 chrX 15209008 15209058 9 505 1.0 3.0 2.0 3.0 555 chrX 15208503 intergenic not near genes chrX 15208780 intergenic not near genes chrX 15209058 intergenic not near genes chrX_9_15205001 chrX_15205001 Sg4 2553 chrX 15248248 15248281 chrX 15248341 15248382 8 96 2.5 1.0 1.8 2.9 134 chrX 15248248 intergenic not near genes chrX 15248315 intergenic not near genes chrX 15248382 intergenic not near genes chrX_8_15245001 chrX_15245001 Sg4 2554 chrX 15273704 15273730 chrX 15274896 15274905 1360 6 1187 6.0 4.0 5.0 1.0 1201 chrX 15273704 intergenic not near genes chrX 15274304 intergenic not near genes chrX 15274905 intergenic not near genes chrX_6_15270001 chrX_15270001 Sg4 2555 chrX 15413038 15413074 chrX 15417364 15417401 Juan 6 4326 6.0 3.5 4.8 1.0 4363 chrX 15413038 intron Cngl - chrX 15415220 intron Cngl - chrX 15417401 intron Cngl - chrX_6_15415001 chrX_15415001 Sg4 2556 chrX 15421895 15421949 chrX 15423431 15423485 pogo 6 1536 0.5 0.0 0.2 5.0 1590 chrX 15421895 intron Cngl - chrX 15422690 intron Cngl - chrX 15423485 intron Cngl - chrX_6_15420001 chrX_15420001 Sg4 2557 chrX 15565620 15565668 chrX 15565724 15565779 7 110 3.0 2.0 2.5 2.0 159 chrX 15565620 intergenic not near genes chrX 15565700 intergenic not near genes chrX 15565779 intergenic not near genes chrX_7_15565001 chrX_15565001 Sg4 2558 chrX 15666188 15666214 chrX 15666290 15666316 5 102 2.5 2.5 2.5 1.4 128 chrX 15666188 intergenic CR43299 - chrX 15666252 intergenic not near genes chrX 15666316 intergenic not near genes chrX_5_15665001 chrX_15665001 Sg4 2559 chrX 15678015 15678068 chrX 15678118 15678170 5 102 0.5 1.5 1.0 2.5 155 chrX 15678015 intergenic CG12708 + chrX 15678092 intergenic CG12708 + chrX 15678170 intergenic CG12708 + chrX_5_15675001 chrX_15675001 Sg4 2560 chrX 15749651 15749678 chrX 15749779 15749806 6 128 0.0 2.0 1.0 3.0 155 chrX 15749651 intron CG8239 + chrX 15749728 intron CG8239 + chrX 15749806 intron CG8239 + chrX_6_15745001 chrX_15745001 Sg4 2561 chrX 15824621 15824642 chrX 15824723 15824750 8 103 5.0 3.5 4.2 1.5 129 chrX 15824621 3` UTR sd + chrX 15824686 3` UTR sd + chrX 15824750 3` UTR sd + chrX_8_15820001 chrX_15820001 Sg4 2562 chrX 16308881 16308941 chrX 16308989 16309048 8 108 0.0 1.5 0.8 4.4 167 chrX 16308881 intergenic CR45485 +,CG9914 - chrX 16308964 intergenic CR45485 +,CG9914 - chrX 16309048 intergenic CR45485 +,CG9914 - chrX_8_16305001 chrX_16305001 Sg4 2563 chrX 16340658 16340696 chrX 16349838 16349878 roo 4 9181 0.0 0.5 0.2 3.3 9220 chrX 16340658 intergenic Dsp1 + chrX 16345268 intergenic not near genes chrX 16349878 intergenic sl + chrX_4_16345001 chrX_16345001 Sg4 2564 chrX 16492629 16492675 chrX 16498224 16498277 mdg3 14 5601 2.5 4.0 3.2 3.3 5648 chrX 16492629 intron para - chrX 16495453 intron para - chrX 16498277 exon para - chrX_14_16495001 chrX_16495001 Sg4 2565 chrX 17011948 17011996 chrX 17012056 17012097 5 107 0.0 1.5 0.8 2.8 149 chrX 17011948 intron CG45002 - chrX 17012022 intron CG45002 - chrX 17012097 intron CG45002 - chrX_5_17010001 chrX_17010001 Sg4 2566 chrX 17057913 17057943 chrX 17058179 17058209 pogo 4 266 2.5 1.0 1.8 1.4 296 chrX 17057913 intron CG45002 - chrX 17058061 intron CG45002 - chrX 17058209 intron CG45002 - chrX_4_17055001 chrX_17055001 Sg4 2567 chrX 17195192 17195231 chrX 17200303 17200342 flea 6 5110 2.0 2.0 2.0 2.0 5150 chrX 17195192 3` UTR baz + chrX 17197767 3` UTR baz + chrX 17200342 3` UTR baz + chrX_6_17195001 chrX_17195001 Sg4 2568 chrX 17205829 17205857 chrX 17205939 17205972 4 114 1.0 1.5 1.2 1.8 143 chrX 17205829 intergenic not near genes chrX 17205900 intergenic not near genes chrX 17205972 intergenic CG32564 + chrX_4_17205001 chrX_17205001 Sg4 2569 chrX 17282851 17282880 chrX 17282954 17282983 9 103 7.0 0.5 3.8 1.9 132 chrX 17282851 intron CG5445 + chrX 17282917 5` UTR CG5445 + chrX 17282983 intron CG5445 + chrX_9_17280001 chrX_17280001 Sg4 2570 chrX 17322494 17322531 chrX 17322597 17322634 5 103 2.0 2.0 2.0 1.7 140 chrX 17322494 intron B-H2 + chrX 17322564 intron B-H2 + chrX 17322634 intron B-H2 + chrX_5_17320001 chrX_17320001 Sg4 2571 chrX 17352573 17352620 chrX 17352692 17352743 9 124 0.0 1.0 0.5 6.0 170 chrX 17352573 intergenic not near genes chrX 17352658 intergenic not near genes chrX 17352743 intergenic not near genes chrX_9_17350001 chrX_17350001 Sg4 2572 chrX 17544983 17545032 chrX 17545090 17545139 7 107 0.5 0.5 0.5 4.7 156 chrX 17544983 intron CG43658 - chrX 17545061 intron CG43658 - chrX 17545139 intron CG43658 - chrX_7_17545001 chrX_17545001 Sg4 2573 chrX 17911829 17911874 chrX 17911942 17911987 5 113 0.0 2.0 1.0 2.5 158 chrX 17911829 intron CG6847 + chrX 17911908 intron CG6847 + chrX 17911987 intron CG6847 + chrX_5_17910001 chrX_17910001 Sg4 2574 chrX 18122797 18122834 chrX 18122898 18122935 11 101 7.0 3.0 5.0 1.8 138 chrX 18122797 5` UTR CR45606 + chrX 18122866 5` UTR CR45606 + chrX 18122935 intergenic CR45606 + chrX_11_18120001 chrX_18120001 Sg4 2575 chrX 18194071 18194100 chrX 18194631 18194658 BS 5 560 2.5 6.0 4.2 1.0 587 chrX 18194071 intron Frq2 + chrX 18194364 intron Frq2 + chrX 18194658 intron Frq2 + chrX_5_18190001 chrX_18190001 Sg4 2576 chrX 18257032 18257050 chrX 18257127 18257170 4 114 3.5 2.0 2.8 1.1 138 chrX 18257032 3` UTR CR45613 - chrX 18257101 3` UTR CR45613 - chrX 18257170 3` UTR CR45613 - chrX_4_18255001 chrX_18255001 Sg4 2577 chrX 18429483 18429494 chrX 18434819 18434830 Transpac 4 5336 4.5 2.5 3.5 0.9 5347 chrX 18429483 intergenic not near genes chrX 18432156 intergenic not near genes chrX 18434830 intergenic not near genes chrX_4_18430001 chrX_18430001 Sg4 2578 chrX 18453531 18453561 chrX 18453898 18453933 4 371 4.0 0.0 2.0 1.3 402 chrX 18453531 intron CG32547 - chrX 18453732 intron CG32547 - chrX 18453933 intron CG32547 - chrX_4_18450001 chrX_18450001 Sg4 2579 chrX 18520025 18520072 chrX 18520987 18521031 5 958 5.5 9.5 7.5 0.6 1006 chrX 18520025 exon,intron Aats-his +,Bx + chrX 18520528 intron Bx + chrX 18521031 exon Bx + chrX_5_18520001 chrX_18520001 Sg4 2580 chrX 18524343 18524369 chrX 18524447 18524473 5 104 1.0 2.0 1.5 2.0 130 chrX 18524343 intron Bx + chrX 18524408 intron Bx + chrX 18524473 intron Bx + chrX_5_18520001 chrX_18520001 Sg4 2581 chrX 18645005 18645046 chrX 18645113 18645169 10 120 1.5 1.0 1.2 4.5 164 chrX 18645005 intron Rip11 - chrX 18645087 intron Rip11 - chrX 18645169 intron Rip11 - chrX_10_18645001 chrX_18645001 Sg4 2582 chrX 18671201 18671227 chrX 18671308 18671334 6 107 1.0 1.0 1.0 3.0 133 chrX 18671201 intergenic not near genes chrX 18671268 intergenic not near genes chrX 18671334 intergenic not near genes chrX_6_18670001 chrX_18670001 Sg4 2583 chrX 18698824 18698872 chrX 18698966 18699014 5 142 2.0 2.0 2.0 1.7 190 chrX 18698824 intergenic not near genes chrX 18698919 intergenic not near genes chrX 18699014 intergenic not near genes chrX_5_18695001 chrX_18695001 Sg4 2584 chrX 18749849 18749894 chrX 18749958 18750003 10 109 2.0 1.0 1.5 4.0 154 chrX 18749849 intergenic not near genes chrX 18749926 intergenic not near genes chrX 18750003 intergenic not near genes chrX_10_18745001 chrX_18745001 Sg4 2585 chrX 18988286 18988523 chrX 18988468 18988637 4 131 0.0 0.0 0.0 4.0 351 chrX 18988286 intron CG43759 + chrX 18988462 intron CG43759 + chrX 18988637 intron CG43759 + chrX_4_18985001 chrX_18985001 Sg4 2586 chrX 19060386 19060436 chrX 19065195 19065245 Doc 7 4809 1.0 2.5 1.8 2.5 4859 chrX 19060386 intron CG14190 + chrX 19062816 intron CG14190 + chrX 19065245 intron CG14190 + chrX_7_19060001 chrX_19060001 Sg4 2587 chrX 19073659 19073697 chrX 19073770 19073794 8 110 2.5 1.5 2.0 2.7 135 chrX 19073659 intergenic not near genes chrX 19073726 intergenic not near genes chrX 19073794 intergenic not near genes chrX_8_19070001 chrX_19070001 Sg4 2588 chrX 19080316 19080354 chrX 19080447 19080485 8 131 1.0 3.5 2.2 2.5 169 chrX 19080316 intergenic not near genes chrX 19080400 intergenic not near genes chrX 19080485 intergenic not near genes chrX_8_19080001 chrX_19080001 Sg4 2589 chrX 19125663 19125694 chrX 19125761 19125803 6 105 3.5 1.5 2.5 1.7 140 chrX 19125663 intron tgy - chrX 19125733 intron tgy - chrX 19125803 intron tgy - chrX_6_19125001 chrX_19125001 Sg4 2590 chrX 19136528 19136579 chrX 19143473 19143523 412 7 6944 3.0 2.0 2.5 2.0 6995 chrX 19136528 intergenic not near genes chrX 19140026 intergenic not near genes chrX 19143523 3` UTR RhoGAP18B - chrX_7_19140001 chrX_19140001 Sg4 2591 chrX 19185514 19185562 chrX 19185635 19185683 5 119 0.0 4.0 2.0 1.7 169 chrX 19185514 intron CG33253 + chrX 19185598 intron CG33253 + chrX 19185683 intron CG33253 + chrX_5_19185001 chrX_19185001 Sg4 2592 chrX 19249327 19249385 chrX 19249434 19249465 13 97 4.0 1.5 2.8 3.4 138 chrX 19249327 intron Hs3st-B + chrX 19249396 intron Hs3st-B + chrX 19249465 intron Hs3st-B + chrX_13_19245001 chrX_19245001 Sg4 2593 chrX 19380138 19380166 chrX 19380404 19380432 pogo 6 265 3.5 0.5 2.0 2.0 294 chrX 19380138 intron kek5 + chrX 19380285 intron kek5 + chrX 19380432 intron kek5 + chrX_6_19380001 chrX_19380001 Sg4 2594 chrX 19404374 19404401 chrX 19404870 19404897 5 496 5.0 3.5 4.2 1.0 523 chrX 19404374 intron kek5 + chrX 19404636 intron kek5 + chrX 19404897 intron kek5 + chrX_5_19400001 chrX_19400001 Sg4 2595 chrX 19412327 19412374 chrX 19412706 19412753 8 378 7.5 7.0 7.2 1.0 426 chrX 19412327 intron kek5 + chrX 19412540 intron kek5 + chrX 19412753 intron kek5 + chrX_8_19410001 chrX_19410001 Sg4 2596 chrX 19472104 19472154 chrX 19472699 19472748 jockey 7 584 2.0 2.5 2.2 2.2 644 chrX 19472104 intergenic kek5 + chrX 19472426 intergenic not near genes chrX 19472748 intergenic not near genes chrX_7_19470001 chrX_19470001 Sg4 2597 chrX 19542117 19542137 chrX 19542235 19542260 6 119 2.5 0.5 1.5 2.4 143 chrX 19542117 intron CG32532 - chrX 19542188 intron CG32532 - chrX 19542260 intron CG32532 - chrX_6_19540001 chrX_19540001 Sg4 2598 chrX 19554668 19554684 chrX 19554764 19554786 6 101 3.0 2.5 2.8 1.6 118 chrX 19554668 intergenic not near genes chrX 19554727 intergenic not near genes chrX 19554786 intergenic not near genes chrX_6_19550001 chrX_19550001 Sg4 2599 chrX 19607053 19607107 chrX 19607165 19607187 11 102 2.0 5.5 3.8 2.3 134 chrX 19607053 intron CG14207 + chrX 19607120 intron CG14207 + chrX 19607187 intron CG14207 + chrX_11_19605001 chrX_19605001 Sg4 2600 chrX 19669849 19669878 chrX 19670135 19670167 4 284 4.0 3.0 3.5 0.9 318 chrX 19669849 intron Zw + chrX 19670008 intron Zw + chrX 19670167 intron Zw + chrX_4_19670001 chrX_19670001 Sg4 2601 chrX 19710050 19710097 chrX 19711861 19711908 S-element 13 1810 5.5 2.0 3.8 2.7 1858 chrX 19710050 intron meso18E - chrX 19710979 intron meso18E - chrX 19711908 intron meso18E - chrX_13_19710001 chrX_19710001 Sg4 2602 chrX 19744607 19744634 chrX 19744758 19744785 7 151 36.0 23.5 29.8 0.2 178 chrX 19744607 5` UTR,exon CG33932 +,Rpp20 + chrX 19744696 intron,intron CG33932 +,Rpp20 + chrX 19744785 5` UTR,exon CG33932 +,Rpp20 + chrX_7_19740001 chrX_19740001 Sg4 2603 chrX 19744642 19744660 chrX 19744755 19744811 16 139 27.5 24.0 25.8 0.6 169 chrX 19744642 5` UTR,exon CG33932 +,Rpp20 + chrX 19744726 intron,intron CG33932 +,Rpp20 + chrX 19744811 5` UTR,exon CG33932 +,Rpp20 + chrX_16_19740001 chrX_19740001 Sg4 2604 chrX 19756100 19756108 chrX 19756211 19756219 4 110 4.0 2.0 3.0 1.0 119 chrX 19756100 intron Pmp70 + chrX 19756160 intron Pmp70 + chrX 19756219 intron Pmp70 + chrX_4_19755001 chrX_19755001 Sg4 2605 chrX 19797325 19797337 chrX 19804663 19804675 Stalker4 5 7336 4.5 0.0 2.2 1.6 7350 chrX 19797325 intergenic not near genes chrX 19801000 intergenic not near genes chrX 19804675 intergenic not near genes chrX_5_19800001 chrX_19800001 Sg4 2606 chrX 19884074 19884120 chrX 19884175 19884179 4 84 3.5 2.0 2.8 1.1 105 chrX 19884074 intron Hers + chrX 19884126 intron Hers + chrX 19884179 intron Hers + chrX_4_19880001 chrX_19880001 Sg4 2607 chrX 19897365 19897415 chrX 19897467 19897517 7 102 2.0 3.0 2.5 2.0 152 chrX 19897365 intron Hers + chrX 19897441 intron Hers + chrX 19897517 intron Hers + chrX_7_19895001 chrX_19895001 Sg4 2608 chrX 19992395 19992428 chrX 19992496 19992529 6 98 5.0 6.0 5.5 0.9 134 chrX 19992395 intergenic not near genes chrX 19992462 intergenic not near genes chrX 19992529 intergenic not near genes chrX_6_19990001 chrX_19990001 Sg4 2609 chrX 20041526 20041556 chrX 20041631 20041661 7 104 3.5 1.0 2.2 2.2 135 chrX 20041526 intron Dop2R - chrX 20041594 intron Dop2R - chrX 20041661 intron Dop2R - chrX_7_20040001 chrX_20040001 Sg4 2610 chrX 20124063 20124108 chrX 20124227 20124272 5 161 0.5 1.5 1.0 2.5 209 chrX 20124063 intron CG34331 + chrX 20124168 intron CG34331 + chrX 20124272 intron CG34331 + chrX_5_20120001 chrX_20120001 Sg4 2611 chrX 20133105 20133139 chrX 20133218 20133252 9 113 0.0 3.0 1.5 3.6 147 chrX 20133105 intergenic CG15322 + chrX 20133178 intergenic CG15322 + chrX 20133252 intergenic CG15322 + chrX_9_20130001 chrX_20130001 Sg4 2612 chrX 20144835 20144868 chrX 20145030 20145063 5 195 2.5 1.5 2.0 1.7 228 chrX 20144835 intergenic not near genes chrX 20144949 intergenic not near genes chrX 20145063 intergenic not near genes chrX_5_20140001 chrX_20140001 Sg4 2613 chrX 20269907 20269925 chrX 20270014 20270032 4 107 2.5 0.5 1.5 1.6 125 chrX 20269907 intergenic Inx6 - chrX 20269970 intergenic Inx6 - chrX 20270032 intergenic Inx6 - chrX_4_20265001 chrX_20265001 Sg4 2614 chrX 20312865 20312901 chrX 20312968 20313004 6 103 1.0 2.5 1.8 2.1 139 chrX 20312865 intron CG1504 - chrX 20312934 intron CG1504 - chrX 20313004 intron CG1504 - chrX_6_20310001 chrX_20310001 Sg4 2615 chrX 20437335 20437387 chrX 20437935 20437987 10 600 4.0 2.0 3.0 2.5 652 chrX 20437335 intron CG1695 + chrX 20437661 intron CG1695 + chrX 20437987 intron CG1695 + chrX_10_20435001 chrX_20435001 Sg4 2616 chrX 20456666 20456686 chrX 20456793 20456813 4 124 0.5 3.5 2.0 1.3 147 chrX 20456666 intron CG32506 + chrX 20456740 intron CG32506 + chrX 20456813 intron CG32506 + chrX_4_20455001 chrX_20455001 Sg4 2617 chrX 20464119 20464152 chrX 20467663 20467716 10 3564 18.5 19.0 18.8 0.5 3597 chrX 20464119 exon CG32506 + chrX 20465918 3` UTR CG32506 + chrX 20467716 5` UTR GstT3 + chrX_10_20465001 chrX_20465001 Sg4 2618 chrX 20504105 20504153 chrX 20505651 20505699 transib2 12 1546 2.0 2.5 2.2 3.8 1594 chrX 20504105 intron RhoGAP19D - chrX 20504902 intron RhoGAP19D - chrX 20505699 intron RhoGAP19D - chrX_12_20500001 chrX_20500001 Sg4 2619 chrX 20528580 20528623 chrX 20528953 20528996 4 372 1.0 2.5 1.8 1.4 416 chrX 20528580 intergenic not near genes chrX 20528788 intergenic not near genes chrX 20528996 intergenic not near genes chrX_4_20525001 chrX_20525001 Sg4 2620 chrX 20531757 20531781 chrX 20531881 20531905 5 124 0.0 3.0 1.5 2.0 148 chrX 20531757 intergenic not near genes chrX 20531831 intergenic not near genes chrX 20531905 intergenic not near genes chrX_5_20530001 chrX_20530001 Sg4 2621 chrX 20836704 20836737 chrX 20844331 20844364 roo 5 7627 1.0 0.5 0.8 2.8 7660 chrX 20836704 intron shakB - chrX 20840534 intron shakB - chrX 20844364 intron shakB - chrX_5_20840001 chrX_20840001 Sg4 2622 chrX 20915035 20915057 chrX 20915220 20915245 4 191 3.0 1.5 2.2 1.2 210 chrX 20915035 intron shakB - chrX 20915140 intron shakB - chrX 20915245 intron shakB - chrX_4_20915001 chrX_20915001 Sg4 2623 chrX 20940699 20940739 chrX 20942193 20942233 hobo 5 1494 3.0 0.5 1.8 1.8 1534 chrX 20940699 intergenic not near genes chrX 20941466 intergenic not near genes chrX 20942233 intergenic not near genes chrX_5_20940001 chrX_20940001 Sg4 2624 chrX 20981005 20981036 chrX 20981133 20981164 10 128 4.5 2.0 3.2 2.4 159 chrX 20981005 intergenic not near genes chrX 20981084 intergenic not near genes chrX 20981164 intergenic not near genes chrX_10_20980001 chrX_20980001 Sg4 2625 chrX 22996293 22996337 chrX 23003549 23003596 roo 8 7259 2.0 2.0 2.0 2.7 7303 chrX 22996293 intron,intron stnA -,stnB - chrX 22999944 intron,intron stnA -,stnB - chrX 23003596 intron,intron stnA -,stnB - chrX_8_22995001 chrX_22995001 Sg4