SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 12966 12998 chr2L 13151 13183 11 185 13.0 16.0 14.5 0.7 217 chr2L 12966 intron l(2)gl - chr2L 13074 intron l(2)gl - chr2L 13183 intron l(2)gl - chr2L_11_10001 chr2L_10001 S1 2 chr2L 47457 47491 chr2L 52563 52597 jockey 19 5106 4.0 6.5 5.2 3.1 5140 chr2L 47457 intron Cda5 - chr2L 50027 intron Cda5 - chr2L 52597 intron Cda5 - chr2L_19_50001 chr2L_50001 S1 3 chr2L 45958 45987 chr2L 53391 53420 jockey 9 7433 34.0 18.5 26.2 0.3 7462 chr2L 45958 intron Cda5 - chr2L 49689 intron Cda5 - chr2L 53420 intron Cda5 - chr2L_9_45001 chr2L_45001 S1 4 chr2L 314281 314313 chr2L 314368 314400 12 87 3.0 0.0 1.5 4.8 119 chr2L 314281 intron Plc21C + chr2L 314340 intron Plc21C + chr2L 314400 intron Plc21C + chr2L_12_310001 chr2L_310001 S1 5 chr2L 325136 325154 chr2L 325214 325232 5 78 8.0 5.0 6.5 0.7 96 chr2L 325136 intron Plc21C + chr2L 325184 intron Plc21C + chr2L 325232 intron Plc21C + chr2L_5_325001 chr2L_325001 S1 6 chr2L 347885 347918 chr2L 355386 355419 blood 7 7501 1.0 3.0 2.0 2.3 7534 chr2L 347885 3` UTR Plc21C + chr2L 351652 intron Plc21C + chr2L 355419 3` UTR Plc21C + chr2L_7_350001 chr2L_350001 S1 7 chr2L 371445 371458 chr2L 371525 371538 4 80 2.5 2.5 2.5 1.1 93 chr2L 371445 intergenic not near genes chr2L 371492 intergenic not near genes chr2L 371538 intergenic not near genes chr2L_4_370001 chr2L_370001 S1 8 chr2L 666279 666309 chr2L 666356 666386 6 77 3.5 0.5 2.0 2.0 107 chr2L 666279 intron ds - chr2L 666332 intron ds - chr2L 666386 intron ds - chr2L_6_665001 chr2L_665001 S1 9 chr2L 686915 686950 chr2L 695956 695991 roo 10 9041 1.5 2.0 1.8 3.6 9076 chr2L 686915 intron ds - chr2L 691453 intron ds - chr2L 695991 intron ds - chr2L_10_690001 chr2L_690001 S1 10 chr2L 736876 736894 chr2L 736982 737000 5 106 5.5 2.0 3.8 1.0 124 chr2L 736876 intergenic Eaat2 - chr2L 736938 intergenic Eaat2 - chr2L 737000 intergenic Eaat2 - chr2L_5_735001 chr2L_735001 S1 11 chr2L 770478 770493 chr2L 772246 772275 Bari1 12 1781 2.5 6.0 4.2 2.3 1797 chr2L 770478 intergenic not near genes chr2L 771376 intergenic not near genes chr2L 772275 intergenic CR44614 + chr2L_12_770001 chr2L_770001 S1 12 chr2L 795258 795281 chr2L 795369 795392 17 110 6.5 0.0 3.2 4.0 134 chr2L 795258 intergenic not near genes chr2L 795325 intergenic not near genes chr2L 795392 intergenic not near genes chr2L_17_795001 chr2L_795001 S1 13 chr2L 877839 877860 chr2L 877921 877942 12 81 8.5 4.5 6.5 1.6 103 chr2L 877839 3` UTR,exon CG15824 -,ninaA + chr2L 877890 3` UTR,intron CG15824 -,ninaA + chr2L 877942 3` UTR,intron CG15824 -,ninaA + chr2L_12_875001 chr2L_875001 S1 14 chr2L 964555 964574 chr2L 964640 964659 5 85 4.0 2.0 3.0 1.2 104 chr2L 964555 intergenic not near genes chr2L 964607 intergenic not near genes chr2L 964659 intergenic not near genes chr2L_5_960001 chr2L_960001 S1 15 chr2L 976890 976905 chr2L 984527 984542 roo 7 7637 4.5 0.5 2.5 2.0 7652 chr2L 976890 intergenic not near genes chr2L 980716 intergenic not near genes chr2L 984542 intergenic not near genes chr2L_7_980001 chr2L_980001 S1 16 chr2L 996721 996755 chr2L 1005817 1005851 roo 5 9096 0.5 2.5 1.5 2.0 9130 chr2L 996721 intergenic not near genes chr2L 1001286 intergenic not near genes chr2L 1005851 intergenic not near genes chr2L_5_1000001 chr2L_1000001 S1 17 chr2L 1028840 1028874 chr2L 1028941 1028975 15 100 2.5 4.5 3.5 3.3 135 chr2L 1028840 intron IA-2 - chr2L 1028908 intron IA-2 - chr2L 1028975 intron IA-2 - chr2L_15_1025001 chr2L_1025001 S1 18 chr2L 1035556 1035590 chr2L 1035634 1035668 8 78 4.5 2.0 3.2 1.9 112 chr2L 1035556 intron IA-2 - chr2L 1035612 intron IA-2 - chr2L 1035668 intron IA-2 - chr2L_8_1035001 chr2L_1035001 S1 19 chr2L 1156483 1156511 chr2L 1156706 1156734 12 223 6.5 3.0 4.8 2.1 251 chr2L 1156483 intron capt - chr2L 1156608 intron capt - chr2L 1156734 intron capt - chr2L_12_1155001 chr2L_1155001 S1 20 chr2L 1157608 1157640 chr2L 1159318 1159350 17 1711 38.0 42.5 40.2 0.4 1742 chr2L 1157608 intron capt - chr2L 1158479 intergenic CR43767 -,Tango14 +,capt - chr2L 1159350 3` UTR,exon CR43767 -,Tango14 + chr2L_17_1155001 chr2L_1155001 S1 21 chr2L 1220127 1220161 chr2L 1227594 1227628 blood 11 7467 5.5 2.0 3.8 2.3 7501 chr2L 1220127 intron CG42329 + chr2L 1223878 intron CG42329 + chr2L 1227628 intron CG42329 + chr2L_11_1220001 chr2L_1220001 S1 22 chr2L 1261144 1261260 chr2L 1261227 1261342 13 82 0.0 0.0 0.0 13.0 198 chr2L 1261144 intron robo3 + chr2L 1261243 intron robo3 + chr2L 1261342 intron robo3 + chr2L_13_1260001 chr2L_1260001 S1 23 chr2L 1275851 1275885 chr2L 1278892 1278926 16 3041 3.0 1.5 2.2 5.0 3075 chr2L 1275851 intron robo3 + chr2L 1277388 intron robo3 + chr2L 1278926 intron robo3 + chr2L_16_1275001 chr2L_1275001 S1 24 chr2L 1322022 1322049 chr2L 1322112 1322139 9 88 4.0 3.0 3.5 2.0 117 chr2L 1322022 intergenic not near genes chr2L 1322080 intergenic not near genes chr2L 1322139 intergenic not near genes chr2L_9_1320001 chr2L_1320001 S1 25 chr2L 1343527 1343553 chr2L 1343721 1343747 8 194 2.0 1.0 1.5 3.2 220 chr2L 1343527 exon CG33922 - chr2L 1343637 intron CG33922 - chr2L 1343747 exon CG33922 - chr2L_8_1340001 chr2L_1340001 S1 26 chr2L 1503423 1503454 chr2L 1503502 1503533 8 79 6.0 3.5 4.8 1.4 110 chr2L 1503423 intron CR44064 + chr2L 1503478 intron CR44064 + chr2L 1503533 intron CR44064 + chr2L_8_1500001 chr2L_1500001 S1 27 chr2L 1529062 1529066 chr2L 1529154 1529158 4 92 6.5 0.0 3.2 1.0 96 chr2L 1529062 intergenic not near genes chr2L 1529110 intergenic not near genes chr2L 1529158 intergenic not near genes chr2L_4_1525001 chr2L_1525001 S1 28 chr2L 1536503 1536510 chr2L 1536636 1536643 4 133 0.0 7.0 3.5 0.9 140 chr2L 1536503 intergenic not near genes chr2L 1536573 intergenic not near genes chr2L 1536643 intergenic not near genes chr2L_4_1535001 chr2L_1535001 S1 29 chr2L 1536511 1536523 chr2L 1536630 1536656 7 129 0.0 6.0 3.0 1.8 145 chr2L 1536511 intergenic not near genes chr2L 1536584 intergenic not near genes chr2L 1536656 intergenic not near genes chr2L_7_1535001 chr2L_1535001 S1 30 chr2L 1564461 1564494 chr2L 1564549 1564582 11 88 1.0 2.5 1.8 3.9 121 chr2L 1564461 intron haf + chr2L 1564522 intron haf + chr2L 1564582 intron haf + chr2L_11_1560001 chr2L_1560001 S1 31 chr2L 1570686 1570715 chr2L 1573559 1573588 F-element 10 2872 5.0 5.5 5.2 1.6 2902 chr2L 1570686 intron haf + chr2L 1572137 intron haf + chr2L 1573588 intron haf + chr2L_10_1570001 chr2L_1570001 S1 32 chr2L 1635394 1635430 chr2L 1635531 1635567 12 137 0.0 2.0 1.0 6.0 173 chr2L 1635394 intergenic not near genes chr2L 1635480 intergenic not near genes chr2L 1635567 intergenic not near genes chr2L_12_1635001 chr2L_1635001 S1 33 chr2L 1678956 1679005 chr2L 1686440 1686471 blood 8 7470 0.0 3.5 1.8 2.9 7515 chr2L 1678956 intron chinmo + chr2L 1682714 intron chinmo + chr2L 1686471 intron chinmo + chr2L_8_1680001 chr2L_1680001 S1 34 chr2L 1711353 1711389 chr2L 1711678 1711714 mdg3 13 325 4.5 7.0 5.8 1.9 361 chr2L 1711353 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711534 3` UTR frtz - chr2L 1711714 3` UTR frtz - chr2L_13_1710001 chr2L_1710001 S1 35 chr2L 1721824 1721848 chr2L 1721909 1721933 5 85 0.0 1.0 0.5 3.3 109 chr2L 1721824 intron Rim2 - chr2L 1721878 intron Rim2 - chr2L 1721933 intron Rim2 - chr2L_5_1720001 chr2L_1720001 S1 36 chr2L 1878239 1878271 chr2L 1878364 1878396 14 125 1.5 0.5 1.0 7.0 157 chr2L 1878239 intron CG31663 - chr2L 1878318 intron CG31663 - chr2L 1878396 intron CG31663 - chr2L_14_1875001 chr2L_1875001 S1 37 chr2L 1910549 1910567 chr2L 1910639 1910657 6 90 3.0 3.5 3.2 1.4 108 chr2L 1910549 intron CG7337 + chr2L 1910603 intron CG7337 + chr2L 1910657 intron CG7337 + chr2L_6_1910001 chr2L_1910001 S1 38 chr2L 2004842 2004870 chr2L 2005286 2005314 11 444 4.0 2.0 3.0 2.8 472 chr2L 2004842 intron CG33543 - chr2L 2005078 intron CG33543 - chr2L 2005314 intron CG33543 - chr2L_11_2005001 chr2L_2005001 S1 39 chr2L 2100375 2100400 chr2L 2109527 2109551 roo 11 9151 4.5 7.0 5.8 1.6 9176 chr2L 2100375 intron dpr3 - chr2L 2104963 intron dpr3 - chr2L 2109551 intron dpr3 - chr2L_11_2100001 chr2L_2100001 S1 40 chr2L 2112113 2112146 chr2L 2119776 2119809 opus 15 7662 7.5 5.0 6.2 2.1 7696 chr2L 2112113 intergenic not near genes chr2L 2115961 intergenic not near genes chr2L 2119809 intergenic not near genes chr2L_15_2115001 chr2L_2115001 S1 41 chr2L 2260804 2260833 chr2L 2260891 2260920 14 87 3.5 3.0 3.2 3.3 116 chr2L 2260804 intergenic not near genes chr2L 2260862 intergenic not near genes chr2L 2260920 intergenic not near genes chr2L_14_2260001 chr2L_2260001 S1 42 chr2L 2294041 2294073 chr2L 2299247 2299279 copia 14 5206 4.5 8.5 6.5 1.9 5238 chr2L 2294041 intergenic not near genes chr2L 2296660 intergenic not near genes chr2L 2299279 intergenic not near genes chr2L_14_2295001 chr2L_2295001 S1 43 chr2L 2311082 2311090 chr2L 2311179 2311187 4 97 0.0 0.0 0.0 4.0 105 chr2L 2311082 intron CG9967 - chr2L 2311134 intron CG9967 - chr2L 2311187 intron CG9967 - chr2L_4_2310001 chr2L_2310001 S1 44 chr2L 2348106 2348134 chr2L 2348189 2348217 7 83 1.5 1.0 1.2 3.2 111 chr2L 2348106 intron,intron CG9967 -,eys + chr2L 2348162 intron,intron CG9967 -,eys + chr2L 2348217 intron,intron CG9967 -,eys + chr2L_7_2345001 chr2L_2345001 S1 45 chr2L 2372368 2372402 chr2L 2372454 2372483 5 84 0.0 3.0 1.5 2.0 115 chr2L 2372368 intergenic CG3609 - chr2L 2372426 intergenic CG3609 - chr2L 2372483 3` UTR CG3609 - chr2L_5_2370001 chr2L_2370001 S1 46 chr2L 2475676 2475701 chr2L 2475762 2475787 6 86 3.0 3.0 3.0 1.5 111 chr2L 2475676 intergenic not near genes chr2L 2475732 intergenic not near genes chr2L 2475787 intergenic not near genes chr2L_6_2475001 chr2L_2475001 S1 47 chr2L 2543483 2543508 chr2L 2543592 2543617 5 109 6.0 2.0 4.0 1.0 134 chr2L 2543483 intergenic not near genes chr2L 2543550 intergenic not near genes chr2L 2543617 intergenic not near genes chr2L_5_2540001 chr2L_2540001 S1 48 chr2L 2565545 2565565 chr2L 2571614 2571634 297 5 6069 3.5 2.0 2.8 1.3 6089 chr2L 2565545 exon Cyp309a2 - chr2L 2568590 intron Cyp309a2 - chr2L 2571634 intron Cyp309a2 - chr2L_5_2565001 chr2L_2565001 S1 49 chr2L 2587817 2587848 chr2L 2587897 2587928 10 79 0.5 6.0 3.2 2.4 111 chr2L 2587817 intergenic not near genes chr2L 2587872 intergenic not near genes chr2L 2587928 intergenic not near genes chr2L_10_2585001 chr2L_2585001 S1 50 chr2L 2618034 2618061 chr2L 2618114 2618141 15 80 3.0 2.5 2.8 3.9 107 chr2L 2618034 intergenic not near genes chr2L 2618088 intergenic not near genes chr2L 2618141 intergenic not near genes chr2L_15_2615001 chr2L_2615001 S1 51 chr2L 2618350 2618382 chr2L 2618450 2618482 16 99 3.5 3.0 3.2 3.8 132 chr2L 2618350 intergenic not near genes chr2L 2618416 intergenic not near genes chr2L 2618482 intergenic not near genes chr2L_16_2615001 chr2L_2615001 S1 52 chr2L 2625607 2625624 chr2L 2625684 2625701 5 77 6.0 8.5 7.2 0.6 94 chr2L 2625607 3` UTR CR45705 - chr2L 2625654 3` UTR CR45705 - chr2L 2625701 3` UTR CR45705 - chr2L_5_2625001 chr2L_2625001 S1 53 chr2L 2661194 2661232 chr2L 2663033 2663071 I-element 12 1835 2.5 4.5 3.5 2.7 1877 chr2L 2661194 intergenic not near genes chr2L 2662132 intergenic not near genes chr2L 2663071 intergenic not near genes chr2L_12_2660001 chr2L_2660001 S1 54 chr2L 2698869 2698894 chr2L 2698953 2698982 16 88 3.0 1.5 2.2 5.0 113 chr2L 2698869 intron CG31690 + chr2L 2698926 intron CG31690 + chr2L 2698982 intron CG31690 + chr2L_16_2695001 chr2L_2695001 S1 55 chr2L 2793940 2793977 chr2L 2794021 2794058 10 81 2.5 2.0 2.2 3.1 118 chr2L 2793940 intron Syt1 - chr2L 2793999 intron Syt1 - chr2L 2794058 intron Syt1 - chr2L_10_2790001 chr2L_2790001 S1 56 chr2L 2826538 2826574 chr2L 2826631 2826660 13 89 0.0 3.0 1.5 5.2 122 chr2L 2826538 intron Duox - chr2L 2826599 intron Duox - chr2L 2826660 intron Duox - chr2L_13_2825001 chr2L_2825001 S1 57 chr2L 2937412 2937449 chr2L 2937491 2937527 5 79 0.0 1.0 0.5 3.3 115 chr2L 2937412 intron lilli + chr2L 2937470 intron lilli + chr2L 2937527 intron lilli + chr2L_5_2935001 chr2L_2935001 S1 58 chr2L 3026214 3026250 chr2L 3026869 3026905 21 655 31.5 38.5 35.0 0.6 691 chr2L 3026214 3` UTR CG3542 + chr2L 3026560 3` UTR CG3605 - chr2L 3026905 exon CG3605 - chr2L_21_3025001 chr2L_3025001 S1 59 chr2L 3044903 3044932 chr2L 3045001 3045028 12 98 6.5 4.5 5.5 1.8 125 chr2L 3044903 intron v(2)k05816 + chr2L 3044966 intron v(2)k05816 + chr2L 3045028 intron v(2)k05816 + chr2L_12_3040001 chr2L_3040001 S1 60 chr2L 3073030 3073058 chr2L 3078234 3078262 copia 14 5204 5.0 4.0 4.5 2.5 5232 chr2L 3073030 intron toc - chr2L 3075646 intron toc - chr2L 3078262 intron toc - chr2L_14_3075001 chr2L_3075001 S1 61 chr2L 3087382 3087417 chr2L 3087491 3087525 6 108 1.5 1.5 1.5 2.4 143 chr2L 3087382 intron toc - chr2L 3087454 intron toc - chr2L 3087525 intron toc - chr2L_6_3085001 chr2L_3085001 S1 62 chr2L 3147272 3147307 chr2L 3147350 3147384 15 78 2.0 5.0 3.5 3.3 112 chr2L 3147272 3` UTR Mad - chr2L 3147328 3` UTR Mad - chr2L 3147384 3` UTR Mad - chr2L_15_3145001 chr2L_3145001 S1 63 chr2L 3191439 3191464 chr2L 3191536 3191561 7 97 1.0 1.0 1.0 3.5 122 chr2L 3191439 intron CG34393 - chr2L 3191500 intron CG34393 - chr2L 3191561 intron CG34393 - chr2L_7_3190001 chr2L_3190001 S1 64 chr2L 3193837 3193863 chr2L 3193924 3193950 10 87 2.5 7.0 4.8 1.7 113 chr2L 3193837 intron CG34393 - chr2L 3193894 intron CG34393 - chr2L 3193950 intron CG34393 - chr2L_10_3190001 chr2L_3190001 S1 65 chr2L 3202743 3202767 chr2L 3210173 3210197 mdg1 8 7430 4.5 5.0 4.8 1.4 7454 chr2L 3202743 intergenic not near genes chr2L 3206470 intergenic not near genes chr2L 3210197 intergenic CR45336 + chr2L_8_3205001 chr2L_3205001 S1 66 chr2L 3221506 3221533 chr2L 3221722 3221749 8 216 2.0 4.0 3.0 2.0 243 chr2L 3221506 intergenic not near genes chr2L 3221628 intergenic not near genes chr2L 3221749 intergenic not near genes chr2L_8_3220001 chr2L_3220001 S1 67 chr2L 3251495 3251526 chr2L 3259061 3259092 springer 13 7566 3.5 2.5 3.0 3.2 7597 chr2L 3251495 intergenic not near genes chr2L 3255294 intergenic not near genes chr2L 3259092 intergenic not near genes chr2L_13_3255001 chr2L_3255001 S1 68 chr2L 3261340 3261364 chr2L 3261489 3261513 11 149 0.0 0.0 0.0 11.0 173 chr2L 3261340 intergenic CR45337 -,CR45338 - chr2L 3261426 intergenic CR45337 -,CR45338 - chr2L 3261513 intergenic CR45338 -,CR45337 - chr2L_11_3260001 chr2L_3260001 S1 69 chr2L 3291247 3291269 chr2L 3291328 3291350 5 81 1.5 6.5 4.0 1.0 103 chr2L 3291247 3` UTR CG9664 - chr2L 3291298 3` UTR CG9664 - chr2L 3291350 3` UTR CG9664 - chr2L_5_3290001 chr2L_3290001 S1 70 chr2L 3322036 3322068 chr2L 3324818 3324850 7 2782 42.5 29.0 35.8 0.2 2814 chr2L 3322036 exon CG8837 + chr2L 3323443 intergenic CG8837 + chr2L 3324850 exon CG33281 + chr2L_7_3320001 chr2L_3320001 S1 71 chr2L 3388599 3388625 chr2L 3388841 3388867 pogo 6 242 0.0 4.0 2.0 2.0 268 chr2L 3388599 intergenic CG42460 - chr2L 3388733 intergenic CG42460 - chr2L 3388867 intergenic CG42460 -,CR44791 + chr2L_6_3385001 chr2L_3385001 S1 72 chr2L 3437689 3437702 chr2L 3438038 3438060 5 355 0.0 3.0 1.5 2.0 371 chr2L 3437689 intergenic not near genes chr2L 3437874 intergenic not near genes chr2L 3438060 intergenic not near genes chr2L_5_3435001 chr2L_3435001 S1 73 chr2L 3477459 3477462 chr2L 3477537 3477540 4 78 0.0 0.0 0.0 4.0 81 chr2L 3477459 5` UTR CR43928 + chr2L 3477500 5` UTR CR43928 + chr2L 3477540 5` UTR CR43928 + chr2L_4_3475001 chr2L_3475001 S1 74 chr2L 3508353 3508366 chr2L 3508432 3508445 8 79 0.0 3.0 1.5 3.2 92 chr2L 3508353 intergenic tim -,CR45299 + chr2L 3508399 intergenic CR45299 +,tim - chr2L 3508445 intergenic CR45299 +,tim - chr2L_8_3505001 chr2L_3505001 S1 75 chr2L 3523031 3523055 chr2L 3523145 3523169 10 114 2.0 4.0 3.0 2.5 138 chr2L 3523031 exon Sr-CIV - chr2L 3523100 intron Sr-CIV - chr2L 3523169 exon Sr-CIV - chr2L_10_3520001 chr2L_3520001 S1 76 chr2L 3601088 3601121 chr2L 3601174 3601202 5 85 3.5 0.0 1.8 1.8 114 chr2L 3601088 intergenic not near genes chr2L 3601145 intergenic not near genes chr2L 3601202 intergenic not near genes chr2L_5_3600001 chr2L_3600001 S1 77 chr2L 3634100 3634134 chr2L 3634183 3634217 7 81 3.0 2.5 2.8 1.8 117 chr2L 3634100 intron for - chr2L 3634158 intron for - chr2L 3634217 intron for - chr2L_7_3630001 chr2L_3630001 S1 78 chr2L 3649788 3649800 chr2L 3654991 3655003 copia 5 5203 1.5 2.5 2.0 1.7 5215 chr2L 3649788 intron for - chr2L 3652396 intron for - chr2L 3655003 intron for - chr2L_5_3650001 chr2L_3650001 S1 79 chr2L 3734656 3734669 chr2L 3734734 3734747 6 78 3.5 2.0 2.8 1.6 91 chr2L 3734656 intron CG10019 + chr2L 3734702 intron CG10019 + chr2L 3734747 intron CG10019 + chr2L_6_3730001 chr2L_3730001 S1 80 chr2L 3819623 3819630 chr2L 3819700 3819707 4 77 0.0 3.0 1.5 1.6 84 chr2L 3819623 intergenic not near genes chr2L 3819665 intergenic not near genes chr2L 3819707 intergenic not near genes chr2L_4_3815001 chr2L_3815001 S1 81 chr2L 3891893 3891925 chr2L 3891979 3892011 13 86 2.0 3.5 2.8 3.4 118 chr2L 3891893 intron capu - chr2L 3891952 intron capu - chr2L 3892011 intron capu - chr2L_13_3890001 chr2L_3890001 S1 82 chr2L 3947422 3947435 chr2L 3947627 3947640 4 205 3.5 2.0 2.8 1.1 218 chr2L 3947422 intron fred - chr2L 3947531 intron fred - chr2L 3947640 intron fred - chr2L_4_3945001 chr2L_3945001 S1 83 chr2L 3950087 3950106 chr2L 3950164 3950183 7 77 2.0 2.0 2.0 2.3 96 chr2L 3950087 intron fred - chr2L 3950135 intron fred - chr2L 3950183 intron fred - chr2L_7_3950001 chr2L_3950001 S1 84 chr2L 4037804 4037808 chr2L 4037892 4037896 4 88 3.0 0.5 1.8 1.4 92 chr2L 4037804 intron ed + chr2L 4037850 intron ed + chr2L 4037896 intron ed + chr2L_4_4035001 chr2L_4035001 S1 85 chr2L 4066042 4066064 chr2L 4068868 4068890 Juan 9 2826 2.0 2.5 2.2 2.8 2848 chr2L 4066042 intron ed + chr2L 4067466 intron ed + chr2L 4068890 intron ed + chr2L_9_4065001 chr2L_4065001 S1 86 chr2L 4112186 4112221 chr2L 4112529 4112564 7 343 1.5 1.5 1.5 2.8 378 chr2L 4112186 intron ed + chr2L 4112375 intron ed + chr2L 4112564 intron ed + chr2L_7_4110001 chr2L_4110001 S1 87 chr2L 4136387 4136416 chr2L 4136475 4136504 8 88 0.5 3.0 1.8 2.9 117 chr2L 4136387 intergenic not near genes chr2L 4136446 intergenic not near genes chr2L 4136504 intergenic not near genes chr2L_8_4135001 chr2L_4135001 S1 88 chr2L 4155610 4155635 chr2L 4155852 4155877 7 242 0.0 1.5 0.8 3.9 267 chr2L 4155610 intergenic not near genes chr2L 4155744 intergenic not near genes chr2L 4155877 intergenic not near genes chr2L_7_4155001 chr2L_4155001 S1 89 chr2L 4166377 4166405 chr2L 4166461 4166489 11 84 3.5 3.5 3.5 2.4 112 chr2L 4166377 intergenic Or24a - chr2L 4166433 intergenic Or24a - chr2L 4166489 intergenic Or24a - chr2L_11_4165001 chr2L_4165001 S1 90 chr2L 4184496 4184508 chr2L 4184816 4184828 4 320 0.5 3.0 1.8 1.4 332 chr2L 4184496 intergenic not near genes chr2L 4184662 intergenic not near genes chr2L 4184828 intergenic not near genes chr2L_4_4180001 chr2L_4180001 S1 91 chr2L 4661842 4661849 chr2L 4669423 4669430 opus 5 7581 4.0 7.0 5.5 0.8 7588 chr2L 4661842 intergenic not near genes chr2L 4665636 intergenic not near genes chr2L 4669430 intergenic not near genes chr2L_5_4665001 chr2L_4665001 S1 92 chr2L 4858466 4858484 chr2L 4858555 4858573 6 89 0.0 4.0 2.0 2.0 107 chr2L 4858466 intron pog + chr2L 4858520 intron pog + chr2L 4858573 intron pog + chr2L_6_4855001 chr2L_4855001 S1 93 chr2L 4889435 4889447 chr2L 4889521 4889533 8 86 9.5 10.0 9.8 0.7 98 chr2L 4889435 intergenic not near genes chr2L 4889484 intergenic not near genes chr2L 4889533 intergenic CG15625 + chr2L_8_4885001 chr2L_4885001 S1 94 chr2L 4892887 4892896 chr2L 4892971 4892980 5 84 0.0 4.5 2.2 1.6 93 chr2L 4892887 intron CG3036 + chr2L 4892934 intron CG3036 + chr2L 4892980 intron CG3036 + chr2L_5_4890001 chr2L_4890001 S1 95 chr2L 4918168 4918197 chr2L 4923242 4923271 jockey 9 5074 3.0 4.5 3.8 1.9 5103 chr2L 4918168 intron hoe1 - chr2L 4920720 intron hoe1 - chr2L 4923271 intron hoe1 - chr2L_9_4920001 chr2L_4920001 S1 96 chr2L 5886609 5886617 chr2L 5886704 5886712 6 95 2.0 0.5 1.2 2.7 103 chr2L 5886609 3` UTR CG9029 + chr2L 5886660 intergenic CG9029 + chr2L 5886712 intergenic CG9029 +,CR44577 - chr2L_6_5885001 chr2L_5885001 S1 97 chr2L 5902113 5902118 chr2L 5910964 5910969 4 8851 30.5 39.5 35.0 0.1 8856 chr2L 5902113 intergenic not near genes chr2L 5906541 intergenic CR43808 - chr2L 5910969 exon bchs + chr2L_4_5905001 chr2L_5905001 S1 98 chr2L 5922718 5922730 chr2L 5922811 5922829 7 98 3.0 3.5 3.2 1.7 111 chr2L 5922718 3` UTR bchs + chr2L 5922774 3` UTR bchs + chr2L 5922829 intergenic CG9016 -,bchs + chr2L_7_5920001 chr2L_5920001 S1 99 chr2L 5926348 5926626 chr2L 5926469 5926706 11 91 3.5 0.0 1.8 3.9 358 chr2L 5926348 intron dsf + chr2L 5926527 intron dsf + chr2L 5926706 intron dsf + chr2L_11_5925001 chr2L_5925001 S1 100 chr2L 5931316 5931332 chr2L 5931429 5931445 6 113 2.5 5.0 3.8 1.2 129 chr2L 5931316 intron dsf + chr2L 5931380 intron dsf + chr2L 5931445 intron dsf + chr2L_6_5930001 chr2L_5930001 S1 101 chr2L 5939857 5939867 chr2L 5939997 5940007 7 140 0.0 0.0 0.0 7.0 150 chr2L 5939857 intergenic CR45288 + chr2L 5939932 intergenic CR45288 + chr2L 5940007 intergenic CR45288 + chr2L_7_5935001 chr2L_5935001 S1 102 chr2L 5944551 5944578 chr2L 5948992 5949019 10 4441 65.0 27.5 46.2 0.2 4468 chr2L 5944551 intron Gpdh + chr2L 5946785 intron Gpdh + chr2L 5949019 intergenic Gpdh +,CG9044 + chr2L_10_5945001 chr2L_5945001 S1 103 chr2L 5973638 5973656 chr2L 5976611 5976641 6 2986 29.0 32.5 30.8 0.2 3003 chr2L 5973638 exon chic - chr2L 5975140 intron chic - chr2L 5976641 exon chic - chr2L_6_5975001 chr2L_5975001 S1 104 chr2L 5976725 5976759 chr2L 5979408 5979434 11 2682 36.0 35.0 35.5 0.3 2709 chr2L 5976725 exon chic - chr2L 5978080 intron chic - chr2L 5979434 exon chic - chr2L_11_5975001 chr2L_5975001 S1 105 chr2L 5979649 5979677 chr2L 5980845 5980873 8 1196 30.0 40.0 35.0 0.2 1224 chr2L 5979649 5` UTR chic - chr2L 5980261 intron chic - chr2L 5980873 intron chic - chr2L_8_5980001 chr2L_5980001 S1 106 chr2L 5989035 5989064 chr2L 5989112 5989141 12 77 1.0 2.0 1.5 4.8 106 chr2L 5989035 intergenic ifc +,lid - chr2L 5989088 intergenic ifc +,lid - chr2L 5989141 intergenic lid -,ifc + chr2L_12_5985001 chr2L_5985001 S1 107 chr2L 6025393 6025432 chr2L 6025470 6025509 14 76 3.5 3.0 3.2 3.3 116 chr2L 6025393 intergenic CG9109 - chr2L 6025451 intergenic CG9109 - chr2L 6025509 intergenic CG9109 - chr2L_14_6025001 chr2L_6025001 S1 108 chr2L 6050439 6050467 chr2L 6050544 6050572 7 105 3.0 3.0 3.0 1.8 133 chr2L 6050439 intergenic CG12393 +,CG9135 + chr2L 6050506 intergenic CG12393 +,CG9135 + chr2L 6050572 intergenic CG12393 +,CG9135 + chr2L_7_6050001 chr2L_6050001 S1 109 chr2L 6136577 6136582 chr2L 6136675 6136680 4 98 0.0 7.5 3.8 0.8 103 chr2L 6136577 intergenic not near genes chr2L 6136628 intergenic not near genes chr2L 6136680 intergenic not near genes chr2L_4_6135001 chr2L_6135001 S1 110 chr2L 6185440 6185473 chr2L 6185519 6185552 16 78 5.0 7.5 6.2 2.2 112 chr2L 6185440 intron CG34380 + chr2L 6185496 intron CG34380 + chr2L 6185552 intron CG34380 + chr2L_16_6185001 chr2L_6185001 S1 111 chr2L 6242980 6242986 chr2L 6243074 6243085 5 98 4.0 4.0 4.0 1.0 105 chr2L 6242980 intergenic not near genes chr2L 6243032 intergenic not near genes chr2L 6243085 intergenic not near genes chr2L_5_6240001 chr2L_6240001 S1 112 chr2L 6283948 6283977 chr2L 6284060 6284089 17 112 5.0 2.0 3.5 3.8 141 chr2L 6283948 intron Ddr + chr2L 6284018 intron Ddr + chr2L 6284089 intron Ddr + chr2L_17_6280001 chr2L_6280001 S1 113 chr2L 6285894 6285928 chr2L 6286061 6286095 9 166 3.0 2.5 2.8 2.4 201 chr2L 6285894 intron Ddr + chr2L 6285994 intron Ddr + chr2L 6286095 intron Ddr + chr2L_9_6285001 chr2L_6285001 S1 114 chr2L 6308311 6308339 chr2L 6308395 6308423 11 84 5.0 2.0 3.5 2.4 112 chr2L 6308311 intron Ddr + chr2L 6308367 intron Ddr + chr2L 6308423 intron,3` UTR Ddr +,CG43922 - chr2L_11_6305001 chr2L_6305001 S1 115 chr2L 6318741 6318764 chr2L 6318896 6318919 15 155 1.5 5.5 3.5 3.3 178 chr2L 6318741 intron Ddr + chr2L 6318830 intron Ddr + chr2L 6318919 intron Ddr + chr2L_15_6315001 chr2L_6315001 S1 116 chr2L 6363148 6363183 chr2L 6366075 6366110 Burdock 22 2926 4.0 6.0 5.0 3.7 2962 chr2L 6363148 intergenic not near genes chr2L 6364629 intergenic not near genes chr2L 6366110 intergenic not near genes chr2L_22_6360001 chr2L_6360001 S1 117 chr2L 6426854 6426887 chr2L 6445115 6445148 roo 18 18261 4.0 9.0 6.5 2.4 18294 chr2L 6426854 3` UTR CG9527 - chr2L 6436001 intron CG9527 - chr2L 6445148 exon CG9527 - chr2L_18_6435001 chr2L_6435001 S1 118 chr2L 6564845 6564879 chr2L 6564939 6564973 6 92 2.5 3.5 3.0 1.5 128 chr2L 6564845 3` UTR CG13766 - chr2L 6564909 3` UTR CG13766 - chr2L 6564973 3` UTR CG13766 - chr2L_6_6560001 chr2L_6560001 S1 119 chr2L 6626885 6626919 chr2L 6626971 6627005 12 85 3.5 2.0 2.8 3.2 120 chr2L 6626885 intron Oatp26F - chr2L 6626945 intron Oatp26F - chr2L 6627005 intron Oatp26F - chr2L_12_6625001 chr2L_6625001 S1 120 chr2L 6640913 6640935 chr2L 6641001 6641031 9 95 6.5 4.5 5.5 1.4 118 chr2L 6640913 exon CG31635 - chr2L 6640972 intron CG31635 - chr2L 6641031 intron CG31635 - chr2L_9_6640001 chr2L_6640001 S1 121 chr2L 6655526 6655531 chr2L 6655889 6655894 5 363 12.0 5.5 8.8 0.5 368 chr2L 6655526 exon CG31633 - chr2L 6655710 exon CG31633 - chr2L 6655894 exon CG31633 - chr2L_5_6655001 chr2L_6655001 S1 122 chr2L 6655532 6655546 chr2L 6655887 6655909 13 362 6.5 5.5 6.0 1.9 377 chr2L 6655532 exon CG31633 - chr2L 6655720 exon CG31633 - chr2L 6655909 exon CG31633 - chr2L_13_6655001 chr2L_6655001 S1 123 chr2L 6724533 6724557 chr2L 6724617 6724641 10 84 4.0 6.5 5.2 1.6 108 chr2L 6724533 intron Liprin-alpha + chr2L 6724587 intron Liprin-alpha + chr2L 6724641 intron Liprin-alpha + chr2L_10_6720001 chr2L_6720001 S1 124 chr2L 6876781 6876807 chr2L 6882973 6882988 diver 9 6191 6.5 4.0 5.2 1.5 6207 chr2L 6876781 intron Nlg2 + chr2L 6879884 intron Nlg2 + chr2L 6882988 intron Nlg2 + chr2L_9_6875001 chr2L_6875001 S1 125 chr2L 6950158 6950190 chr2L 6950364 6950396 19 206 6.5 4.0 5.2 3.1 238 chr2L 6950158 5` UTR Gas41 - chr2L 6950277 intergenic Gas41 -,SA + chr2L 6950396 intergenic SA +,Gas41 - chr2L_19_6950001 chr2L_6950001 S1 126 chr2L 7051156 7051164 chr2L 7051233 7051241 6 77 0.0 3.5 1.8 2.1 85 chr2L 7051156 intron milt + chr2L 7051198 intron milt + chr2L 7051241 intron milt + chr2L_6_7050001 chr2L_7050001 S1 127 chr2L 7125791 7125809 chr2L 7125908 7125926 5 117 2.5 4.0 3.2 1.2 135 chr2L 7125791 intron Pvf3 - chr2L 7125858 intron Pvf3 - chr2L 7125926 intron Pvf3 - chr2L_5_7125001 chr2L_7125001 S1 128 chr2L 7126864 7126877 chr2L 7126944 7126957 8 80 2.5 0.0 1.2 3.6 93 chr2L 7126864 intron Pvf3 - chr2L 7126910 intron Pvf3 - chr2L 7126957 intron Pvf3 - chr2L_8_7125001 chr2L_7125001 S1 129 chr2L 7156266 7156301 chr2L 7156344 7156379 40 76 12.0 12.0 12.0 3.1 113 chr2L 7156266 exon Pvf3 - chr2L 7156322 exon Pvf3 - chr2L 7156379 exon Pvf3 - chr2L_40_7155001 chr2L_7155001 S1 130 chr2L 7160193 7160223 chr2L 7160283 7160313 17 90 3.5 4.0 3.8 3.5 120 chr2L 7160193 intergenic not near genes chr2L 7160253 intergenic not near genes chr2L 7160313 intergenic not near genes chr2L_17_7160001 chr2L_7160001 S1 131 chr2L 7254531 7254545 chr2L 7254610 7254624 5 79 0.0 4.5 2.2 1.6 93 chr2L 7254531 intergenic not near genes chr2L 7254578 intergenic not near genes chr2L 7254624 intergenic not near genes chr2L_5_7250001 chr2L_7250001 S1 132 chr2L 7270592 7270622 chr2L 7270669 7270683 12 76 4.0 4.0 4.0 2.4 91 chr2L 7270592 intron Wnt4 - chr2L 7270638 intron Wnt4 - chr2L 7270683 intron Wnt4 - chr2L_12_7270001 chr2L_7270001 S1 133 chr2L 7295995 7296024 chr2L 7296134 7296165 7 139 4.5 3.0 3.8 1.5 170 chr2L 7295995 intergenic not near genes chr2L 7296080 intergenic not near genes chr2L 7296165 intergenic not near genes chr2L_7_7295001 chr2L_7295001 S1 134 chr2L 7325912 7325943 chr2L 7325998 7326029 6 85 5.5 2.5 4.0 1.2 117 chr2L 7325912 intergenic not near genes chr2L 7325970 intergenic not near genes chr2L 7326029 intergenic not near genes chr2L_6_7325001 chr2L_7325001 S1 135 chr2L 7343327 7343352 chr2L 7350444 7350469 roo 12 7117 7.0 5.0 6.0 1.7 7142 chr2L 7343327 intron Wnt6 + chr2L 7346898 intron Wnt6 + chr2L 7350469 intron Wnt6 + chr2L_12_7345001 chr2L_7345001 S1 136 chr2L 7436204 7436220 chr2L 7436293 7436309 6 89 3.0 5.0 4.0 1.2 105 chr2L 7436204 intergenic not near genes chr2L 7436256 intergenic not near genes chr2L 7436309 intergenic not near genes chr2L_6_7435001 chr2L_7435001 S1 137 chr2L 7493410 7493420 chr2L 7493497 7493507 4 87 0.0 1.0 0.5 2.7 97 chr2L 7493410 intron Ziz - chr2L 7493458 intron Ziz - chr2L 7493507 intron Ziz - chr2L_4_7490001 chr2L_7490001 S1 138 chr2L 7502736 7502770 chr2L 7502813 7502847 25 77 6.0 5.5 5.8 3.7 111 chr2L 7502736 intron RapGAP1 - chr2L 7502792 intron RapGAP1 - chr2L 7502847 intron RapGAP1 - chr2L_25_7500001 chr2L_7500001 S1 139 chr2L 7515541 7515572 chr2L 7515785 7515816 13 244 1.5 1.0 1.2 5.9 275 chr2L 7515541 intron RapGAP1 - chr2L 7515678 intron RapGAP1 - chr2L 7515816 intron RapGAP1 - chr2L_13_7515001 chr2L_7515001 S1 140 chr2L 7555214 7555233 chr2L 7555292 7555311 9 78 0.0 3.0 1.5 3.6 97 chr2L 7555214 intron RapGAP1 - chr2L 7555262 intron RapGAP1 - chr2L 7555311 intron RapGAP1 - chr2L_9_7555001 chr2L_7555001 S1 141 chr2L 7650495 7650507 chr2L 7650585 7650597 8 90 5.5 9.5 7.5 0.9 102 chr2L 7650495 intron Slob - chr2L 7650546 intron Slob - chr2L 7650597 intron Slob - chr2L_8_7650001 chr2L_7650001 S1 142 chr2L 7766632 7766660 chr2L 7766709 7766714 6 71 5.0 0.0 2.5 1.7 82 chr2L 7766632 intergenic not near genes chr2L 7766673 intergenic not near genes chr2L 7766714 intergenic not near genes chr2L_6_7765001 chr2L_7765001 S1 143 chr2L 7803652 7803662 chr2L 7803743 7803753 8 91 6.0 9.0 7.5 0.9 101 chr2L 7803652 intron cdc14 - chr2L 7803702 intron cdc14 - chr2L 7803753 intron cdc14 - chr2L_8_7800001 chr2L_7800001 S1 144 chr2L 7867570 7867601 chr2L 7867665 7867696 12 95 2.5 1.5 2.0 4.0 126 chr2L 7867570 intron Proc - chr2L 7867633 intron Proc - chr2L 7867696 intron Proc - chr2L_12_7865001 chr2L_7865001 S1 145 chr2L 7922741 7922774 chr2L 7922823 7922856 11 82 4.5 7.0 5.8 1.6 115 chr2L 7922741 intron Snoo - chr2L 7922798 intron Snoo - chr2L 7922856 intron Snoo - chr2L_11_7920001 chr2L_7920001 S1 146 chr2L 7959041 7959064 chr2L 7960453 7960476 pogo 14 1412 3.0 0.0 1.5 5.6 1435 chr2L 7959041 intron Snoo - chr2L 7959758 intron Snoo - chr2L 7960476 intron Snoo - chr2L_14_7955001 chr2L_7955001 S1 147 chr2L 7977089 7977113 chr2L 7984066 7984090 297 8 6977 5.5 6.5 6.0 1.1 7001 chr2L 7977089 intron Snoo - chr2L 7980590 intron Snoo - chr2L 7984090 intron,5` UTR Snoo -,CG7231 + chr2L_8_7980001 chr2L_7980001 S1 148 chr2L 7997031 7997065 chr2L 7997132 7997166 7 101 2.0 1.5 1.8 2.5 135 chr2L 7997031 intron CG7227 - chr2L 7997098 intron CG7227 - chr2L 7997166 intron CG7227 - chr2L_7_7995001 chr2L_7995001 S1 149 chr2L 8003045 8003069 chr2L 8003128 8003152 5 83 0.0 6.5 3.2 1.2 107 chr2L 8003045 intron Wwox - chr2L 8003098 intron Wwox - chr2L 8003152 intron Wwox - chr2L_5_8000001 chr2L_8000001 S1 150 chr2L 8013614 8013630 chr2L 8018819 8018835 copia 5 5205 7.0 0.0 3.5 1.1 5221 chr2L 8013614 intron Tg + chr2L 8016224 intron Tg + chr2L 8018835 intron Tg + chr2L_5_8015001 chr2L_8015001 S1 151 chr2L 8044102 8044131 chr2L 8044182 8044211 13 80 5.0 8.0 6.5 1.7 109 chr2L 8044102 intron CG7466 + chr2L 8044156 intron CG7466 + chr2L 8044211 intron CG7466 + chr2L_13_8040001 chr2L_8040001 S1 152 chr2L 8164582 8164616 chr2L 8164665 8164699 17 83 3.5 4.5 4.0 3.4 117 chr2L 8164582 intron Piezo + chr2L 8164640 intron Piezo + chr2L 8164699 intron Piezo + chr2L_17_8160001 chr2L_8160001 S1 153 chr2L 8171276 8171295 chr2L 8171358 8171377 14 82 0.0 4.5 2.2 4.4 101 chr2L 8171276 intron Piezo + chr2L 8171326 intron Piezo + chr2L 8171377 intron Piezo + chr2L_14_8170001 chr2L_8170001 S1 154 chr2L 8230316 8230318 chr2L 8230401 8230403 4 85 5.5 2.5 4.0 0.8 87 chr2L 8230316 5` UTR Pvr - chr2L 8230360 intron Pvr - chr2L 8230403 intron Pvr - chr2L_4_8230001 chr2L_8230001 S1 155 chr2L 8231939 8232023 chr2L 8232023 8232102 4 80 0.0 0.0 0.0 4.0 163 chr2L 8231939 intron Pvr - chr2L 8232020 intron Pvr - chr2L 8232102 intron Pvr - chr2L_4_8230001 chr2L_8230001 S1 156 chr2L 8288683 8288706 chr2L 8288780 8288803 7 97 1.5 6.0 3.8 1.5 120 chr2L 8288683 intron Btk29A - chr2L 8288743 intron Btk29A - chr2L 8288803 intron Btk29A - chr2L_7_8285001 chr2L_8285001 S1 157 chr2L 8336933 8336965 chr2L 8337013 8337045 9 80 0.0 2.0 1.0 4.5 112 chr2L 8336933 intergenic not near genes chr2L 8336989 intergenic not near genes chr2L 8337045 intergenic not near genes chr2L_9_8335001 chr2L_8335001 S1 158 chr2L 8349606 8349629 chr2L 8349712 8349735 17 106 8.5 3.5 6.0 2.4 129 chr2L 8349606 exon CG7778 + chr2L 8349670 intron CG7778 + chr2L 8349735 intron CG7778 + chr2L_17_8345001 chr2L_8345001 S1 159 chr2L 8452420 8452453 chr2L 8461592 8461625 roo 11 9172 3.0 4.5 3.8 2.3 9205 chr2L 8452420 intron fu12 - chr2L 8457022 intron fu12 - chr2L 8461625 intron fu12 - chr2L_11_8455001 chr2L_8455001 S1 160 chr2L 8538162 8538168 chr2L 8538239 8538245 5 77 7.0 0.0 3.5 1.1 83 chr2L 8538162 intron CG17834 + chr2L 8538204 intron CG17834 + chr2L 8538245 intron CG17834 + chr2L_5_8535001 chr2L_8535001 S1 161 chr2L 8578452 8578452 chr2L 16071771 16071771 4 7493319 20.5 36.5 28.5 0.1 7493319 chr2L 8578452 intron Sema-1a + chr2L 12325112 intergenic not near genes chr2L 16071771 intron beat-Ia + chr2L_4_12325001 chr2L_12325001 S1 162 chr2L 8588494 8588530 chr2L 8588833 8588869 16 339 4.0 2.5 3.2 3.8 375 chr2L 8588494 intron Sema-1a + chr2L 8588682 intron Sema-1a + chr2L 8588869 intron Sema-1a + chr2L_16_8585001 chr2L_8585001 S1 163 chr2L 8594465 8594492 chr2L 8601520 8601547 297 5 7055 6.0 3.0 4.5 0.9 7082 chr2L 8594465 intron,3` UTR Sema-1a +,CR43855 - chr2L 8598006 intron Sema-1a + chr2L 8601547 intron Sema-1a + chr2L_5_8595001 chr2L_8595001 S1 164 chr2L 8604965 8604999 chr2L 8605064 8605098 10 99 4.5 3.5 4.0 2.0 133 chr2L 8604965 intron Sema-1a + chr2L 8605032 intron Sema-1a + chr2L 8605098 intron Sema-1a + chr2L_10_8605001 chr2L_8605001 S1 165 chr2L 8689699 8689734 chr2L 8689797 8689832 24 98 6.0 7.0 6.5 3.2 133 chr2L 8689699 intron Hnf4 - chr2L 8689766 intron Hnf4 - chr2L 8689832 exon Hnf4 - chr2L_24_8685001 chr2L_8685001 S1 166 chr2L 8698328 8698355 chr2L 8698468 8698495 9 140 5.5 0.0 2.8 2.4 167 chr2L 8698328 intron Hnf4 - chr2L 8698412 intron Hnf4 - chr2L 8698495 intron Hnf4 - chr2L_9_8695001 chr2L_8695001 S1 167 chr2L 8723114 8723148 chr2L 8731492 8731526 Tirant 21 8378 4.0 9.0 6.5 2.8 8412 chr2L 8723114 intron raw - chr2L 8727320 intron raw - chr2L 8731526 intron raw - chr2L_21_8725001 chr2L_8725001 S1 168 chr2L 8759988 8759998 chr2L 8760130 8760140 8 142 2.0 0.0 1.0 4.0 152 chr2L 8759988 intergenic not near genes chr2L 8760064 intergenic not near genes chr2L 8760140 intergenic not near genes chr2L_8_8760001 chr2L_8760001 S1 169 chr2L 8784705 8784726 chr2L 8784817 8784838 13 112 5.0 2.5 3.8 2.7 133 chr2L 8784705 intergenic not near genes chr2L 8784772 intergenic not near genes chr2L 8784838 intergenic not near genes chr2L_13_8780001 chr2L_8780001 S1 170 chr2L 8786554 8786578 chr2L 8786642 8786666 7 88 0.0 5.5 2.8 1.8 112 chr2L 8786554 intergenic not near genes chr2L 8786610 intergenic not near genes chr2L 8786666 intergenic not near genes chr2L_7_8785001 chr2L_8785001 S1 171 chr2L 8788751 8788788 chr2L 8788843 8788880 12 92 3.0 2.0 2.5 3.4 129 chr2L 8788751 intergenic not near genes chr2L 8788816 intergenic not near genes chr2L 8788880 intergenic not near genes chr2L_12_8785001 chr2L_8785001 S1 172 chr2L 8799799 8799832 chr2L 8799916 8799949 8 117 2.0 6.0 4.0 1.6 150 chr2L 8799799 intergenic not near genes chr2L 8799874 intergenic not near genes chr2L 8799949 intergenic not near genes chr2L_8_8795001 chr2L_8795001 S1 173 chr2L 8811839 8811868 chr2L 8811920 8811949 20 80 3.0 3.5 3.2 4.8 110 chr2L 8811839 intergenic not near genes chr2L 8811894 intergenic not near genes chr2L 8811949 intergenic not near genes chr2L_20_8810001 chr2L_8810001 S1 174 chr2L 8910724 8910742 chr2L 8910816 8910834 11 92 5.0 2.0 3.5 2.4 110 chr2L 8910724 intron CG34398 + chr2L 8910779 intron CG34398 + chr2L 8910834 intron CG34398 + chr2L_11_8910001 chr2L_8910001 S1 175 chr2L 8956224 8956241 chr2L 8956302 8956319 9 78 2.5 0.0 1.2 4.1 95 chr2L 8956224 intron CG31886 - chr2L 8956272 intron CG31886 - chr2L 8956319 intron CG31886 - chr2L_9_8955001 chr2L_8955001 S1 176 chr2L 9000276 9000311 chr2L 9007787 9007822 roo 24 7510 7.5 8.5 8.0 2.7 7546 chr2L 9000276 intergenic Try29F + chr2L 9004049 intergenic not near genes chr2L 9007822 intergenic not near genes chr2L_24_9000001 chr2L_9000001 S1 177 chr2L 9007813 9007821 chr2L 9007893 9007901 7 80 5.0 0.0 2.5 2.0 88 chr2L 9007813 intergenic not near genes chr2L 9007857 intergenic not near genes chr2L 9007901 intergenic not near genes chr2L_7_9005001 chr2L_9005001 S1 178 chr2L 9084336 9084340 chr2L 16217660 16217660 27 7133321 30.0 20.5 25.2 1.0 7133324 chr2L 9084336 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_27_12650001 chr2L_12650001 S1 179 chr2L 9093957 9093969 chr2L 9094041 9094053 7 84 2.5 2.5 2.5 2.0 96 chr2L 9093957 intergenic not near genes chr2L 9094005 intergenic not near genes chr2L 9094053 intergenic not near genes chr2L_7_9090001 chr2L_9090001 S1 180 chr2L 9116602 9116627 chr2L 9116712 9116737 7 110 5.0 2.0 3.5 1.6 135 chr2L 9116602 intergenic not near genes chr2L 9116670 intergenic not near genes chr2L 9116737 intergenic not near genes chr2L_7_9115001 chr2L_9115001 S1 181 chr2L 9123390 9123407 chr2L 9123474 9123491 6 84 0.0 1.5 0.8 3.3 101 chr2L 9123390 intergenic not near genes chr2L 9123440 intergenic not near genes chr2L 9123491 intergenic not near genes chr2L_6_9120001 chr2L_9120001 S1 182 chr2L 9152148 9152163 chr2L 9152228 9152243 4 80 0.0 2.0 1.0 2.0 95 chr2L 9152148 intron CG32982 + chr2L 9152196 intron CG32982 + chr2L 9152243 intron CG32982 + chr2L_4_9150001 chr2L_9150001 S1 183 chr2L 9173075 9173089 chr2L 9173153 9173167 5 78 1.5 3.0 2.2 1.6 92 chr2L 9173075 intron tai + chr2L 9173121 intron tai + chr2L 9173167 intron tai + chr2L_5_9170001 chr2L_9170001 S1 184 chr2L 9251144 9251173 chr2L 9251242 9251271 16 98 6.5 5.5 6.0 2.3 127 chr2L 9251144 intergenic aust -,borr - chr2L 9251208 intergenic aust -,borr - chr2L 9251271 intergenic borr -,aust - chr2L_16_9250001 chr2L_9250001 S1 185 chr2L 9264342 9264381 chr2L 9264443 9264482 13 101 7.0 5.0 6.0 1.9 140 chr2L 9264342 intron Ggamma30A + chr2L 9264412 intron Ggamma30A + chr2L 9264482 intron Ggamma30A + chr2L_13_9260001 chr2L_9260001 S1 186 chr2L 9274190 9274221 chr2L 9274273 9274304 14 81 3.0 4.5 3.8 2.9 114 chr2L 9274190 intron Ggamma30A + chr2L 9274247 intron Ggamma30A + chr2L 9274304 intron Ggamma30A + chr2L_14_9270001 chr2L_9270001 S1 187 chr2L 9287321 9287356 chr2L 9287419 9287454 16 98 5.0 3.0 4.0 3.2 133 chr2L 9287321 intron Ggamma30A + chr2L 9287388 intron Ggamma30A + chr2L 9287454 intron Ggamma30A + chr2L_16_9285001 chr2L_9285001 S1 188 chr2L 9297377 9297392 chr2L 9297455 9297470 4 78 7.0 2.5 4.8 0.7 93 chr2L 9297377 3` UTR Ggamma30A + chr2L 9297424 3` UTR Ggamma30A + chr2L 9297470 3` UTR Ggamma30A + chr2L_4_9295001 chr2L_9295001 S1 189 chr2L 9380256 9380261 chr2L 9380352 9380357 6 96 9.5 4.5 7.0 0.8 101 chr2L 9380256 exon Shawl - chr2L 9380306 intron Shawl - chr2L 9380357 intron Shawl - chr2L_6_9380001 chr2L_9380001 S1 190 chr2L 9387248 9387277 chr2L 9387347 9387375 7 99 1.0 2.0 1.5 2.8 127 chr2L 9387248 intron Shawl - chr2L 9387312 intron Shawl - chr2L 9387375 intron Shawl - chr2L_7_9385001 chr2L_9385001 S1 191 chr2L 9393501 9393504 chr2L 9396469 9396472 jockey 4 2968 8.0 7.0 7.5 0.5 2971 chr2L 9393501 intron Shawl - chr2L 9394986 intron Shawl - chr2L 9396472 intron Shawl - chr2L_4_9390001 chr2L_9390001 S1 192 chr2L 9393505 9393531 chr2L 9396464 9396499 jockey 15 2966 3.5 6.0 4.8 2.6 2994 chr2L 9393505 intron Shawl - chr2L 9395002 intron Shawl - chr2L 9396499 intron Shawl - chr2L_15_9390001 chr2L_9390001 S1 193 chr2L 9443057 9443093 chr2L 9443172 9443208 19 115 3.0 3.5 3.2 4.5 151 chr2L 9443057 intron numb + chr2L 9443132 intron numb + chr2L 9443208 intron numb + chr2L_19_9440001 chr2L_9440001 S1 194 chr2L 9443552 9443560 chr2L 9443667 9443675 5 115 0.0 2.5 1.2 2.3 123 chr2L 9443552 intron numb + chr2L 9443614 intron numb + chr2L 9443675 intron numb + chr2L_5_9440001 chr2L_9440001 S1 195 chr2L 9448908 9448928 chr2L 9448996 9449016 6 88 0.0 0.0 0.0 6.0 108 chr2L 9448908 intron numb + chr2L 9448962 intron numb + chr2L 9449016 intron numb + chr2L_6_9445001 chr2L_9445001 S1 196 chr2L 9454978 9455003 chr2L 9455081 9455106 14 102 5.5 2.5 4.0 2.8 128 chr2L 9454978 intron numb + chr2L 9455042 intron numb + chr2L 9455106 intron numb + chr2L_14_9455001 chr2L_9455001 S1 197 chr2L 9456930 9456954 chr2L 9457012 9457036 8 82 2.5 2.5 2.5 2.3 106 chr2L 9456930 intron numb + chr2L 9456983 intron numb + chr2L 9457036 intron numb + chr2L_8_9455001 chr2L_9455001 S1 198 chr2L 9460758 9460770 chr2L 9460845 9460850 5 85 10.0 0.0 5.0 0.8 92 chr2L 9460758 intron numb + chr2L 9460804 intron numb + chr2L 9460850 intron numb + chr2L_5_9460001 chr2L_9460001 S1 199 chr2L 9490520 9490552 chr2L 9490601 9490633 16 81 8.5 3.5 6.0 2.3 113 chr2L 9490520 intergenic not near genes chr2L 9490576 intergenic not near genes chr2L 9490633 intergenic not near genes chr2L_16_9490001 chr2L_9490001 S1 200 chr2L 9493246 9493272 chr2L 9493331 9493353 18 84 5.5 3.0 4.2 3.5 107 chr2L 9493246 intron Gdi - chr2L 9493300 intron Gdi - chr2L 9493353 intron Gdi - chr2L_18_9490001 chr2L_9490001 S1 201 chr2L 9506433 9506459 chr2L 9506584 9506610 7 151 3.5 9.0 6.2 1.0 177 chr2L 9506433 intron CG33298 + chr2L 9506522 intron CG33298 + chr2L 9506610 intron CG33298 + chr2L_7_9505001 chr2L_9505001 S1 202 chr2L 9509317 9509345 chr2L 9509400 9509428 16 83 0.5 2.0 1.2 7.3 111 chr2L 9509317 intron CG33298 + chr2L 9509372 intron CG33298 + chr2L 9509428 intron CG33298 + chr2L_16_9505001 chr2L_9505001 S1 203 chr2L 9556892 9556920 chr2L 9556983 9556994 6 88 0.5 2.5 1.5 2.4 102 chr2L 9556892 intron jp - chr2L 9556943 intron jp - chr2L 9556994 intron jp - chr2L_6_9555001 chr2L_9555001 S1 204 chr2L 9593354 9593393 chr2L 9593437 9593476 20 83 3.0 3.0 3.0 5.0 122 chr2L 9593354 intergenic not near genes chr2L 9593415 intergenic not near genes chr2L 9593476 intergenic not near genes chr2L_20_9590001 chr2L_9590001 S1 205 chr2L 9679474 9679487 chr2L 9679555 9679568 8 80 0.5 0.0 0.2 6.7 94 chr2L 9679474 intergenic not near genes chr2L 9679521 intergenic not near genes chr2L 9679568 intergenic not near genes chr2L_8_9675001 chr2L_9675001 S1 206 chr2L 9730973 9731006 chr2L 9731057 9731090 15 83 1.5 3.0 2.2 4.7 117 chr2L 9730973 intron Nckx30C - chr2L 9731032 intron Nckx30C - chr2L 9731090 intron Nckx30C - chr2L_15_9730001 chr2L_9730001 S1 207 chr2L 9828261 9828274 chr2L 9828342 9828355 16 81 6.0 12.0 9.0 1.6 94 chr2L 9828261 intron nAChRalpha6 - chr2L 9828308 intron nAChRalpha6 - chr2L 9828355 intron nAChRalpha6 - chr2L_16_9825001 chr2L_9825001 S1 208 chr2L 9829575 9829603 chr2L 9829778 9829806 19 203 7.5 7.5 7.5 2.2 231 chr2L 9829575 intron nAChRalpha6 - chr2L 9829690 intron nAChRalpha6 - chr2L 9829806 intron nAChRalpha6 - chr2L_19_9825001 chr2L_9825001 S1 209 chr2L 9732231 9732262 chr2L 9851700 9851731 7 119469 37.0 24.5 30.8 0.2 119500 chr2L 9732231 intron Nckx30C - chr2L 9791981 3` UTR CG13123 - chr2L 9851731 intron nAChRalpha6 - chr2L_7_9790001 chr2L_9790001 S1 210 chr2L 9973724 9973759 chr2L 9980844 9980879 HMS-Beagle 21 7120 5.5 4.0 4.8 3.6 7155 chr2L 9973724 intergenic not near genes chr2L 9977302 intergenic not near genes chr2L 9980879 intergenic not near genes chr2L_21_9975001 chr2L_9975001 S1 211 chr2L 10051723 10051752 chr2L 10051809 10051828 9 85 5.0 4.0 4.5 1.6 105 chr2L 10051723 5` UTR CR44874 + chr2L 10051776 5` UTR CR44874 + chr2L 10051828 5` UTR CR44874 + chr2L_9_10050001 chr2L_10050001 S1 212 chr2L 10095628 10095661 chr2L 10095709 10095742 9 81 3.5 2.5 3.0 2.2 114 chr2L 10095628 intron CG44153 - chr2L 10095685 intron CG44153 - chr2L 10095742 intron CG44153 - chr2L_9_10095001 chr2L_10095001 S1 213 chr2L 10105285 10105315 chr2L 10105362 10105392 13 76 3.0 9.0 6.0 1.9 107 chr2L 10105285 intron,intron CG44153 -,CG34109 + chr2L 10105338 intron,intron CG44153 -,CG34109 + chr2L 10105392 intron,intron CG44153 -,CG34109 + chr2L_13_10105001 chr2L_10105001 S1 214 chr2L 10156238 10156273 chr2L 10164089 10164124 blood 20 7851 3.5 4.5 4.0 4.0 7886 chr2L 10156238 intron,3` UTR CG44153 -,CG4839 + chr2L 10160181 intron CG44153 - chr2L 10164124 intron CG44153 - chr2L_20_10160001 chr2L_10160001 S1 215 chr2L 10176024 10176024 chr2L 16071771 16071771 6 5895747 24.5 36.5 30.5 0.2 5895747 chr2L 10176024 intron CG44153 - chr2L 13123898 intergenic not near genes chr2L 16071771 intron beat-Ia + chr2L_6_13120001 chr2L_13120001 S1 216 chr2L 10180586 10180590 chr2L 10180674 10180677 5 88 10.5 0.0 5.2 0.8 91 chr2L 10180586 intergenic CG44153 - chr2L 10180632 intergenic CG44153 - chr2L 10180677 intergenic CG44153 - chr2L_5_10180001 chr2L_10180001 S1 217 chr2L 10180595 10180606 chr2L 10180672 10180677 6 80 3.0 0.0 1.5 2.4 82 chr2L 10180595 intergenic CG44153 - chr2L 10180636 intergenic CG44153 - chr2L 10180677 intergenic CG44153 - chr2L_6_10180001 chr2L_10180001 S1 218 chr2L 10204514 10204532 chr2L 10204598 10204616 7 84 2.5 6.0 4.2 1.3 102 chr2L 10204514 intergenic CG34159 -,CG5734 - chr2L 10204565 intergenic CG5734 -,CG34159 - chr2L 10204616 intergenic CG5734 -,CG34159 - chr2L_7_10200001 chr2L_10200001 S1 219 chr2L 10209846 10209855 chr2L 10209924 10209933 5 78 4.0 0.0 2.0 1.7 87 chr2L 10209846 intergenic CG5727 -,CR44845 +,CG5731 - chr2L 10209890 3` UTR CG5727 - chr2L 10209933 3` UTR CG5727 - chr2L_5_10205001 chr2L_10205001 S1 220 chr2L 10348392 10348409 chr2L 10348476 10348493 7 84 0.0 3.0 1.5 2.8 101 chr2L 10348392 intron CG34367 - chr2L 10348442 intron CG34367 - chr2L 10348493 intron CG34367 - chr2L_7_10345001 chr2L_10345001 S1 221 chr2L 10421316 10421320 chr2L 10421383 10421388 5 70 13.5 15.5 14.5 0.3 72 chr2L 10421316 exon pie - chr2L 10421352 exon pie - chr2L 10421388 exon pie - chr2L_5_10420001 chr2L_10420001 S1 222 chr2L 10474381 10474412 chr2L 10474463 10474494 12 82 5.5 0.5 3.0 3.0 113 chr2L 10474381 intergenic RluA-1 - chr2L 10474438 intergenic RluA-1 - chr2L 10474494 intergenic RluA-1 - chr2L_12_10470001 chr2L_10470001 S1 223 chr2L 10495302 10495461 chr2L 10495380 10495548 15 84 0.0 0.5 0.2 12.5 246 chr2L 10495302 intron Myo31DF - chr2L 10495425 intron Myo31DF - chr2L 10495548 intron Myo31DF - chr2L_15_10495001 chr2L_10495001 S1 224 chr2L 10515359 10515391 chr2L 10515453 10515485 10 94 4.5 3.0 3.8 2.1 126 chr2L 10515359 intron,intron CG45083 -,Fatp - chr2L 10515422 intron,intron CG45083 -,Fatp - chr2L 10515485 intron,intron CG45083 -,Fatp - chr2L_10_10515001 chr2L_10515001 S1 225 chr2L 10563909 10563947 chr2L 10564003 10564041 11 94 1.5 3.5 2.5 3.1 132 chr2L 10563909 intron Trim9 + chr2L 10563975 intron Trim9 + chr2L 10564041 intron Trim9 + chr2L_11_10560001 chr2L_10560001 S1 226 chr2L 10572702 10572735 chr2L 10572784 10572817 19 82 5.0 6.0 5.5 2.9 115 chr2L 10572702 intron Trim9 + chr2L 10572760 intron Trim9 + chr2L 10572817 intron Trim9 + chr2L_19_10570001 chr2L_10570001 S1 227 chr2L 10592850 10592875 chr2L 10600513 10600538 opus 7 7662 3.5 5.5 4.5 1.3 7688 chr2L 10592850 intron Trim9 + chr2L 10596694 intron Trim9 + chr2L 10600538 intron Trim9 + chr2L_7_10595001 chr2L_10595001 S1 228 chr2L 10640638 10640669 chr2L 10640728 10640759 21 90 8.5 5.0 6.8 2.7 121 chr2L 10640638 exon CG31872 + chr2L 10640698 exon CG31872 + chr2L 10640759 exon CG31872 + chr2L_21_10640001 chr2L_10640001 S1 229 chr2L 10688541 10688566 chr2L 10688618 10688643 6 77 0.5 2.5 1.5 2.4 102 chr2L 10688541 intergenic CG7294 - chr2L 10688592 intergenic CG7294 - chr2L 10688643 intergenic CG7294 - chr2L_6_10685001 chr2L_10685001 S1 230 chr2L 10704916 10704927 chr2L 10705012 10705023 6 96 9.5 0.0 4.8 1.0 107 chr2L 10704916 intron,3` UTR Lip2 -,CG6415 + chr2L 10704970 intron Lip2 - chr2L 10705023 intron Lip2 - chr2L_6_10700001 chr2L_10700001 S1 231 chr2L 10785058 10785094 chr2L 10785135 10785171 27 76 8.0 8.5 8.2 2.9 113 chr2L 10785058 intron CG31869 - chr2L 10785114 intron CG31869 - chr2L 10785171 intron CG31869 - chr2L_27_10785001 chr2L_10785001 S1 232 chr2L 10791857 10791888 chr2L 10791938 10791969 17 80 7.5 4.5 6.0 2.4 112 chr2L 10791857 intron CG31869 - chr2L 10791913 intron CG31869 - chr2L 10791969 intron CG31869 - chr2L_17_10790001 chr2L_10790001 S1 233 chr2L 10862843 10862853 chr2L 10864458 10864468 Rt1c 5 1615 12.5 7.0 9.8 0.5 1625 chr2L 10862843 3` UTR CR43807 - chr2L 10863656 intron CR43807 - chr2L 10864468 3` UTR CR43807 - chr2L_5_10860001 chr2L_10860001 S1 234 chr2L 10862858 10862881 chr2L 10864452 10864496 Rt1c 18 1612 4.0 6.5 5.2 2.9 1638 chr2L 10862858 3` UTR CR43807 - chr2L 10863677 intron CR43807 - chr2L 10864496 3` UTR CR43807 - chr2L_18_10860001 chr2L_10860001 S1 235 chr2L 10912986 10913002 chr2L 10913066 10913081 11 80 13.0 4.0 8.5 1.2 95 chr2L 10912986 intergenic not near genes chr2L 10913034 intergenic not near genes chr2L 10913081 intergenic not near genes chr2L_11_10910001 chr2L_10910001 S1 236 chr2L 10927139 10927160 chr2L 10927222 10927243 8 83 2.5 4.0 3.2 1.9 104 chr2L 10927139 intron dpr2 - chr2L 10927191 intron dpr2 - chr2L 10927243 intron dpr2 - chr2L_8_10925001 chr2L_10925001 S1 237 chr2L 10944458 10944467 chr2L 10944542 10944551 6 84 3.5 3.5 3.5 1.3 93 chr2L 10944458 intron dpr2 - chr2L 10944504 intron dpr2 - chr2L 10944551 intron dpr2 - chr2L_6_10940001 chr2L_10940001 S1 238 chr2L 10946952 10946974 chr2L 10956163 10956190 roo 15 9216 12.0 8.0 10.0 1.4 9238 chr2L 10946952 intron dpr2 - chr2L 10951571 intron dpr2 - chr2L 10956190 intron dpr2 - chr2L_15_10950001 chr2L_10950001 S1 239 chr2L 11152733 11152743 chr2L 11152816 11152826 10 83 0.0 6.0 3.0 2.5 93 chr2L 11152733 intron CG6287 - chr2L 11152780 intron CG6287 - chr2L 11152826 intron CG6287 - chr2L_10_11150001 chr2L_11150001 S1 240 chr2L 11404783 11404810 chr2L 11404860 11404887 14 76 0.0 4.0 2.0 4.7 104 chr2L 11404783 intergenic not near genes chr2L 11404835 intergenic not near genes chr2L 11404887 intergenic not near genes chr2L_14_11400001 chr2L_11400001 S1 241 chr2L 11443175 11443198 chr2L 11443269 11443290 5 94 8.5 5.0 6.8 0.6 115 chr2L 11443175 intron salm - chr2L 11443232 intron salm - chr2L 11443290 intron salm - chr2L_5_11440001 chr2L_11440001 S1 242 chr2L 11491125 11491160 chr2L 11491207 11491242 19 81 1.5 3.0 2.2 5.9 117 chr2L 11491125 intergenic not near genes chr2L 11491184 intergenic not near genes chr2L 11491242 intergenic not near genes chr2L_19_11490001 chr2L_11490001 S1 243 chr2L 11540331 11540350 chr2L 11540485 11540511 7 160 4.0 2.0 3.0 1.8 180 chr2L 11540331 intergenic not near genes chr2L 11540421 intergenic not near genes chr2L 11540511 intergenic not near genes chr2L_7_11540001 chr2L_11540001 S1 244 chr2L 11540586 11540603 chr2L 11547989 11548006 Tabor 4 7402 9.5 10.0 9.8 0.4 7420 chr2L 11540586 intergenic not near genes chr2L 11544296 intergenic not near genes chr2L 11548006 intergenic not near genes chr2L_4_11540001 chr2L_11540001 S1 245 chr2L 11550631 11550661 chr2L 11550721 11550751 7 90 1.0 1.5 1.2 3.2 120 chr2L 11550631 intergenic not near genes chr2L 11550691 intergenic not near genes chr2L 11550751 intergenic not near genes chr2L_7_11550001 chr2L_11550001 S1 246 chr2L 11563637 11563669 chr2L 11568842 11568874 copia 9 5205 8.0 5.0 6.5 1.2 5237 chr2L 11563637 intergenic not near genes chr2L 11566256 intergenic not near genes chr2L 11568874 intergenic not near genes chr2L_9_11565001 chr2L_11565001 S1 247 chr2L 11614051 11614086 chr2L 11615547 11615582 hopper2 10 1494 2.0 5.0 3.5 2.2 1531 chr2L 11614051 intron kek2 + chr2L 11614816 intron kek2 + chr2L 11615582 intron kek2 + chr2L_10_11610001 chr2L_11610001 S1 248 chr2L 11672139 11672158 chr2L 11672247 11672266 7 108 5.0 0.5 2.8 1.8 127 chr2L 11672139 intergenic not near genes chr2L 11672202 intergenic not near genes chr2L 11672266 intergenic not near genes chr2L_7_11670001 chr2L_11670001 S1 249 chr2L 11713505 11713540 chr2L 11720974 11721009 blood 15 7469 3.0 4.0 3.5 3.3 7504 chr2L 11713505 intergenic not near genes chr2L 11717257 intergenic not near genes chr2L 11721009 intergenic CR44143 + chr2L_15_11715001 chr2L_11715001 S1 250 chr2L 11736539 11736572 chr2L 11736621 11736645 14 80 3.5 5.0 4.2 2.7 106 chr2L 11736539 5` UTR CR44145 + chr2L 11736592 5` UTR CR44145 + chr2L 11736645 5` UTR CR44145 + chr2L_14_11735001 chr2L_11735001 S1 251 chr2L 11825706 11825712 chr2L 11825786 11825792 8 80 1.5 0.0 0.8 4.4 86 chr2L 11825706 intron Pde1c - chr2L 11825749 intron Pde1c - chr2L 11825792 intron Pde1c - chr2L_8_11825001 chr2L_11825001 S1 252 chr2L 11841380 11841395 chr2L 11841459 11841474 4 79 2.0 1.0 1.5 1.6 94 chr2L 11841380 intron Pde1c - chr2L 11841427 intron Pde1c - chr2L 11841474 intron Pde1c - chr2L_4_11840001 chr2L_11840001 S1 253 chr2L 11889421 11889452 chr2L 11889765 11889796 8 344 5.5 3.0 4.2 1.5 375 chr2L 11889421 intron Pde1c - chr2L 11889608 intron Pde1c - chr2L 11889796 intron Pde1c - chr2L_8_11885001 chr2L_11885001 S1 254 chr2L 11892546 11892561 chr2L 11892636 11892651 8 90 5.0 5.0 5.0 1.3 105 chr2L 11892546 intron Pde1c - chr2L 11892598 intron Pde1c - chr2L 11892651 intron Pde1c - chr2L_8_11890001 chr2L_11890001 S1 255 chr2L 11976089 11976118 chr2L 11976167 11976196 11 78 4.0 2.5 3.2 2.6 107 chr2L 11976089 intergenic not near genes chr2L 11976142 intergenic not near genes chr2L 11976196 intergenic not near genes chr2L_11_11975001 chr2L_11975001 S1 256 chr2L 12031383 12031417 chr2L 12031465 12031499 10 82 2.5 1.5 2.0 3.3 116 chr2L 12031383 intron dmGlut + chr2L 12031441 intron dmGlut + chr2L 12031499 intron dmGlut + chr2L_10_12030001 chr2L_12030001 S1 257 chr2L 12033595 12033630 chr2L 12033675 12033710 21 80 7.0 7.5 7.2 2.6 115 chr2L 12033595 3` UTR dmGlut + chr2L 12033652 3` UTR dmGlut + chr2L 12033710 3` UTR dmGlut + chr2L_21_12030001 chr2L_12030001 S1 258 chr2L 12067327 12067360 chr2L 12074380 12074413 297 15 7053 2.5 4.0 3.2 3.6 7086 chr2L 12067327 intergenic not near genes chr2L 12070870 intergenic not near genes chr2L 12074413 intergenic not near genes chr2L_15_12070001 chr2L_12070001 S1 259 chr2L 12112029 12112042 chr2L 12112141 12112154 6 112 0.0 4.5 2.2 1.9 125 chr2L 12112029 3` UTR Phae2 + chr2L 12112092 3` UTR Phae2 + chr2L 12112154 3` UTR Phae2 + chr2L_6_12110001 chr2L_12110001 S1 260 chr2L 12171454 12171470 chr2L 12171532 12171548 9 78 1.0 3.5 2.2 2.8 94 chr2L 12171454 3` UTR CG6583 - chr2L 12171501 3` UTR CG6583 - chr2L 12171548 3` UTR CG6583 - chr2L_9_12170001 chr2L_12170001 S1 261 chr2L 12175846 12175849 chr2L 12175929 12175932 4 83 0.0 3.0 1.5 1.6 86 chr2L 12175846 intron,intron aret +,atilla - chr2L 12175889 intron,intron aret +,atilla - chr2L 12175932 intron,intron aret +,atilla - chr2L_4_12175001 chr2L_12175001 S1 262 chr2L 12272165 12272197 chr2L 12272242 12272274 9 77 2.5 4.0 3.2 2.1 109 chr2L 12272165 intron aret + chr2L 12272220 intron aret + chr2L 12272274 intron aret + chr2L_9_12270001 chr2L_12270001 S1 263 chr2L 12287802 12287820 chr2L 12287879 12287897 5 77 1.5 1.5 1.5 2.0 95 chr2L 12287802 intron aret + chr2L 12287850 intron aret + chr2L 12287897 intron aret + chr2L_5_12285001 chr2L_12285001 S1 264 chr2L 12366860 12366891 chr2L 12366947 12366978 12 87 3.5 5.0 4.2 2.3 118 chr2L 12366860 intron bru-2 + chr2L 12366919 intron bru-2 + chr2L 12366978 intron bru-2 + chr2L_12_12365001 chr2L_12365001 S1 265 chr2L 12398668 12398693 chr2L 12398758 12398775 14 88 10.5 21.0 15.8 0.8 107 chr2L 12398668 exon Pkd2 + chr2L 12398722 exon Pkd2 + chr2L 12398775 exon Pkd2 + chr2L_14_12395001 chr2L_12395001 S1 266 chr2L 12411009 12411037 chr2L 12411089 12411117 7 80 1.5 2.0 1.8 2.5 108 chr2L 12411009 intron vir-1 - chr2L 12411063 intron vir-1 - chr2L 12411117 intron vir-1 - chr2L_7_12410001 chr2L_12410001 S1 267 chr2L 12474950 12474960 chr2L 12475129 12475139 6 179 6.5 5.5 6.0 0.9 189 chr2L 12474950 intron bun - chr2L 12475044 intron bun - chr2L 12475139 intron bun - chr2L_6_12475001 chr2L_12475001 S1 268 chr2L 12487883 12487918 chr2L 12487965 12488000 22 82 9.5 6.0 7.8 2.5 117 chr2L 12487883 intron bun - chr2L 12487942 intron bun - chr2L 12488000 intron bun - chr2L_22_12485001 chr2L_12485001 S1 269 chr2L 12558320 12558351 chr2L 12565450 12565481 HMS-Beagle 10 7130 2.5 1.5 2.0 3.3 7161 chr2L 12558320 intergenic not near genes chr2L 12561900 intergenic not near genes chr2L 12565481 intergenic not near genes chr2L_10_12560001 chr2L_12560001 S1 270 chr2L 12647589 12647620 chr2L 12647706 12647737 9 117 3.0 7.0 5.0 1.5 148 chr2L 12647589 intergenic not near genes chr2L 12647663 intergenic not near genes chr2L 12647737 intergenic not near genes chr2L_9_12645001 chr2L_12645001 S1 271 chr2L 12728920 12728944 chr2L 12729161 12729185 pogo 8 241 8.5 1.5 5.0 1.3 265 chr2L 12728920 intron MRP + chr2L 12729052 intron MRP + chr2L 12729185 exon MRP + chr2L_8_12725001 chr2L_12725001 S1 272 chr2L 12731053 12731085 chr2L 12735821 12735853 F-element 19 4768 7.5 8.0 7.8 2.2 4800 chr2L 12731053 intron MRP + chr2L 12733453 intron MRP + chr2L 12735853 intron MRP + chr2L_19_12730001 chr2L_12730001 S1 273 chr2L 12739172 12739205 chr2L 12743954 12743987 Doc 24 4782 5.0 4.5 4.8 4.1 4815 chr2L 12739172 exon MRP + chr2L 12741580 intron MRP + chr2L 12743987 exon MRP + chr2L_24_12740001 chr2L_12740001 S1 274 chr2L 12748293 12748322 chr2L 12748372 12748401 15 79 6.0 5.0 5.5 2.3 108 chr2L 12748293 intergenic not near genes chr2L 12748347 intergenic not near genes chr2L 12748401 intergenic not near genes chr2L_15_12745001 chr2L_12745001 S1 275 chr2L 12751308 12751341 chr2L 12751392 12751425 17 84 3.5 4.0 3.8 3.5 117 chr2L 12751308 intergenic not near genes chr2L 12751366 intergenic not near genes chr2L 12751425 intergenic not near genes chr2L_17_12750001 chr2L_12750001 S1 276 chr2L 12763171 12763192 chr2L 12763263 12763277 8 91 5.5 5.0 5.2 1.3 106 chr2L 12763171 intergenic not near genes chr2L 12763224 intergenic not near genes chr2L 12763277 intergenic not near genes chr2L_8_12760001 chr2L_12760001 S1 277 chr2L 12777122 12777148 chr2L 12777312 12777338 11 189 3.5 4.0 3.8 2.3 216 chr2L 12777122 intergenic not near genes chr2L 12777230 intergenic not near genes chr2L 12777338 intergenic not near genes chr2L_11_12775001 chr2L_12775001 S1 278 chr2L 12791602 12791633 chr2L 12795278 12795309 F-element 12 3673 5.5 6.0 5.8 1.8 3707 chr2L 12791602 intergenic not near genes chr2L 12793456 intergenic not near genes chr2L 12795309 intergenic not near genes chr2L_12_12790001 chr2L_12790001 S1 279 chr2L 12833043 12833074 chr2L 12833126 12833157 21 83 5.0 5.0 5.0 3.5 114 chr2L 12833043 intergenic not near genes chr2L 12833100 intergenic not near genes chr2L 12833157 intergenic not near genes chr2L_21_12830001 chr2L_12830001 S1 280 chr2L 12861692 12861726 chr2L 12863160 12863194 hobo 27 1468 8.5 6.5 7.5 3.2 1502 chr2L 12861692 intergenic not near genes chr2L 12862443 intergenic not near genes chr2L 12863194 intergenic not near genes chr2L_27_12860001 chr2L_12860001 S1 281 chr2L 12894020 12894050 chr2L 12895488 12895518 hobo 28 1466 6.0 8.5 7.2 3.4 1498 chr2L 12894020 intergenic not near genes chr2L 12894769 intergenic not near genes chr2L 12895518 intergenic not near genes chr2L_28_12890001 chr2L_12890001 S1 282 chr2L 12905479 12905509 chr2L 12905564 12905594 13 85 1.0 2.0 1.5 5.2 115 chr2L 12905479 intergenic not near genes chr2L 12905536 intergenic not near genes chr2L 12905594 intergenic not near genes chr2L_13_12905001 chr2L_12905001 S1 283 chr2L 12933847 12933883 chr2L 12941315 12941351 blood 24 7468 6.0 4.5 5.2 3.9 7504 chr2L 12933847 intergenic not near genes chr2L 12937599 intergenic not near genes chr2L 12941351 intergenic not near genes chr2L_24_12935001 chr2L_12935001 S1 284 chr2L 12963793 12963825 chr2L 12963896 12963928 12 102 3.5 3.5 3.5 2.7 135 chr2L 12963793 intergenic not near genes chr2L 12963860 intergenic not near genes chr2L 12963928 intergenic not near genes chr2L_12_12960001 chr2L_12960001 S1 285 chr2L 13154112 13154125 chr2L 13154191 13154204 6 79 1.5 1.0 1.2 2.7 92 chr2L 13154112 intergenic not near genes chr2L 13154158 intergenic not near genes chr2L 13154204 intergenic not near genes chr2L_6_13150001 chr2L_13150001 S1 286 chr2L 13253886 13253919 chr2L 13253975 13254006 12 89 1.0 3.0 2.0 4.0 120 chr2L 13253886 intron CG31728 + chr2L 13253946 intron CG31728 + chr2L 13254006 intron CG31728 + chr2L_12_13250001 chr2L_13250001 S1 287 chr2L 13400145 13400173 chr2L 13400630 13400658 11 485 5.0 5.5 5.2 1.8 513 chr2L 13400145 intron CG7110 + chr2L 13400402 intron CG7110 + chr2L 13400658 intron CG7110 + chr2L_11_13400001 chr2L_13400001 S1 288 chr2L 13405648 13405681 chr2L 13410446 13410479 Doc 6 4798 4.0 2.0 3.0 1.5 4831 chr2L 13405648 exon CG7110 + chr2L 13408064 intron CG7110 + chr2L 13410479 intron CG7110 + chr2L_6_13405001 chr2L_13405001 S1 289 chr2L 13449459 13449496 chr2L 13456896 13456933 Quasimodo 7 7437 0.5 4.5 2.5 2.0 7474 chr2L 13449459 intron,5` UTR CG42784 +,Hsp60D - chr2L 13453196 intron CG42784 + chr2L 13456933 intron CG42784 + chr2L_7_13450001 chr2L_13450001 S1 290 chr2L 13481450 13481475 chr2L 13482058 13482083 jockey 20 608 9.5 11.0 10.2 1.8 633 chr2L 13481450 intron CG42784 + chr2L 13481766 intron CG42784 + chr2L 13482083 intron CG42784 + chr2L_20_13480001 chr2L_13480001 S1 291 chr2L 13493331 13493363 chr2L 13493615 13493645 6 283 3.5 4.5 4.0 1.2 314 chr2L 13493331 intron CG42784 + chr2L 13493488 intron CG42784 + chr2L 13493645 intron CG42784 + chr2L_6_13490001 chr2L_13490001 S1 292 chr2L 13558814 13558844 chr2L 13558905 13558934 12 91 4.0 1.5 2.8 3.2 120 chr2L 13558814 exon kuz + chr2L 13558874 intron kuz + chr2L 13558934 intron kuz + chr2L_12_13555001 chr2L_13555001 S1 293 chr2L 13560399 13560419 chr2L 13565221 13565241 F-element 7 4822 2.5 3.0 2.8 1.8 4842 chr2L 13560399 intron kuz + chr2L 13562820 intron kuz + chr2L 13565241 intron kuz + chr2L_7_13560001 chr2L_13560001 S1 294 chr2L 13605049 13605080 chr2L 13605127 13605141 9 71 7.0 4.5 5.8 1.3 92 chr2L 13605049 intron kuz + chr2L 13605095 intron kuz + chr2L 13605141 intron kuz + chr2L_9_13605001 chr2L_13605001 S1 295 chr2L 13620106 13620141 chr2L 13620333 13620368 13 227 2.5 6.0 4.2 2.5 262 chr2L 13620106 intron kuz + chr2L 13620237 intron kuz + chr2L 13620368 intron kuz + chr2L_13_13620001 chr2L_13620001 S1 296 chr2L 13622134 13622170 chr2L 13622234 13622270 19 100 2.5 0.5 1.5 7.6 136 chr2L 13622134 intron kuz + chr2L 13622202 intron kuz + chr2L 13622270 intron kuz + chr2L_19_13620001 chr2L_13620001 S1 297 chr2L 13701885 13701917 chr2L 13701966 13701998 17 81 5.0 3.0 4.0 3.4 113 chr2L 13701885 intron CG31814 - chr2L 13701942 intron CG31814 - chr2L 13701998 intron CG31814 - chr2L_17_13700001 chr2L_13700001 S1 298 chr2L 13761796 13761835 chr2L 13762908 13762947 Doc 17 1112 4.0 2.5 3.2 4.0 1151 chr2L 13761796 intron TM9SF4 + chr2L 13762372 intron TM9SF4 + chr2L 13762947 intron TM9SF4 + chr2L_17_13760001 chr2L_13760001 S1 299 chr2L 13853081 13853115 chr2L 13862232 13862266 roo 19 9150 4.5 6.0 5.2 3.1 9185 chr2L 13853081 intron CenG1A + chr2L 13857674 intron CenG1A + chr2L 13862266 intron CenG1A + chr2L_19_13855001 chr2L_13855001 S1 300 chr2L 13913588 13913604 chr2L 13913702 13913718 5 114 7.0 5.5 6.2 0.7 130 chr2L 13913588 intergenic not near genes chr2L 13913653 intergenic not near genes chr2L 13913718 intergenic not near genes chr2L_5_13910001 chr2L_13910001 S1 301 chr2L 13981518 13981552 chr2L 13981610 13981644 14 92 6.5 5.0 5.8 2.1 126 chr2L 13981518 exon NimC2 + chr2L 13981581 intron NimC2 + chr2L 13981644 intron NimC2 + chr2L_14_13980001 chr2L_13980001 S1 302 chr2L 14000047 14000079 chr2L 14000135 14000167 22 88 3.5 3.0 3.2 5.2 120 chr2L 14000047 intron rk - chr2L 14000107 intron rk - chr2L 14000167 intron rk - chr2L_22_14000001 chr2L_14000001 S1 303 chr2L 14068603 14068622 chr2L 14068684 14068703 12 81 8.5 0.0 4.2 2.3 100 chr2L 14068603 intron nAChRalpha5 + chr2L 14068653 intron nAChRalpha5 + chr2L 14068703 intron nAChRalpha5 + chr2L_12_14065001 chr2L_14065001 S1 304 chr2L 14071996 14072015 chr2L 14072176 14072184 7 178 4.5 5.5 5.0 1.2 188 chr2L 14071996 intron nAChRalpha5 + chr2L 14072090 intron nAChRalpha5 + chr2L 14072184 intron nAChRalpha5 + chr2L_7_14070001 chr2L_14070001 S1 305 chr2L 14246284 14246314 chr2L 14246363 14246393 12 79 0.0 0.0 0.0 12.0 109 chr2L 14246284 intergenic not near genes chr2L 14246338 intergenic not near genes chr2L 14246393 intergenic not near genes chr2L_12_14245001 chr2L_14245001 S1 306 chr2L 14333908 14333929 chr2L 14334009 14334030 7 101 1.5 3.0 2.2 2.2 122 chr2L 14333908 intergenic ms(2)34Fe +,CG33090 + chr2L 14333969 intergenic ms(2)34Fe +,CG33090 + chr2L 14334030 intergenic CG33090 +,ms(2)34Fe + chr2L_7_14330001 chr2L_14330001 S1 307 chr2L 14369122 14369160 chr2L 14369239 14369277 17 117 5.0 2.5 3.8 3.5 155 chr2L 14369122 intergenic not near genes chr2L 14369200 intergenic not near genes chr2L 14369277 intergenic not near genes chr2L_17_14365001 chr2L_14365001 S1 308 chr2L 14429435 14429447 chr2L 14429516 14429529 6 82 4.5 4.0 4.2 1.2 94 chr2L 14429435 3` UTR CR44732 - chr2L 14429482 3` UTR CR44732 - chr2L 14429529 3` UTR CR44732 - chr2L_6_14425001 chr2L_14425001 S1 309 chr2L 14487149 14487182 chr2L 14487250 14487283 17 101 2.0 4.0 3.0 4.2 134 chr2L 14487149 intergenic CR44731 + chr2L 14487216 intergenic CR44731 + chr2L 14487283 intergenic not near genes chr2L_17_14485001 chr2L_14485001 S1 310 chr2L 14564193 14564231 chr2L 14564270 14564308 24 77 5.0 11.0 8.0 2.7 115 chr2L 14564193 intergenic CG3473 - chr2L 14564250 intergenic not near genes chr2L 14564308 intergenic not near genes chr2L_24_14560001 chr2L_14560001 S1 311 chr2L 14570554 14570588 chr2L 14570872 14570906 22 317 10.0 3.5 6.8 2.8 352 chr2L 14570554 intergenic not near genes chr2L 14570730 intergenic not near genes chr2L 14570906 intergenic not near genes chr2L_22_14570001 chr2L_14570001 S1 312 chr2L 14588388 14588415 chr2L 14588543 14588570 10 155 5.0 4.5 4.8 1.7 182 chr2L 14588388 intergenic CG42680 - chr2L 14588479 intergenic CG42680 - chr2L 14588570 intergenic CG42680 - chr2L_10_14585001 chr2L_14585001 S1 313 chr2L 14621373 14621402 chr2L 14621474 14621503 12 101 6.5 3.5 5.0 2.0 130 chr2L 14621373 intron osp - chr2L 14621438 intron osp - chr2L 14621503 intron osp - chr2L_12_14620001 chr2L_14620001 S1 314 chr2L 14642567 14642601 chr2L 14651731 14651765 roo 13 9164 3.5 5.5 4.5 2.4 9198 chr2L 14642567 intron osp - chr2L 14647166 intron osp - chr2L 14651765 intron osp - chr2L_13_14645001 chr2L_14645001 S1 315 chr2L 14681321 14681346 chr2L 14681469 14681495 14 148 5.5 5.0 5.2 2.3 174 chr2L 14681321 intron osp - chr2L 14681408 intron osp - chr2L 14681495 intron osp - chr2L_14_14680001 chr2L_14680001 S1 316 chr2L 14694252 14694289 chr2L 14694377 14694413 20 125 4.0 2.5 3.2 4.8 161 chr2L 14694252 intergenic not near genes chr2L 14694332 intergenic not near genes chr2L 14694413 intergenic not near genes chr2L_20_14690001 chr2L_14690001 S1 317 chr2L 14768934 14768956 chr2L 14769013 14769035 7 79 1.0 2.5 1.8 2.5 101 chr2L 14768934 intergenic not near genes chr2L 14768984 intergenic not near genes chr2L 14769035 intergenic not near genes chr2L_7_14765001 chr2L_14765001 S1 318 chr2L 14773232 14773264 chr2L 14773323 14773355 19 91 4.0 4.5 4.2 3.7 123 chr2L 14773232 intergenic not near genes chr2L 14773294 intergenic not near genes chr2L 14773355 intergenic CG4650 - chr2L_19_14770001 chr2L_14770001 S1 319 chr2L 14778806 14778840 chr2L 14779095 14779129 24 289 8.5 7.5 8.0 2.7 323 chr2L 14778806 intergenic not near genes chr2L 14778968 intergenic not near genes chr2L 14779129 intergenic not near genes chr2L_24_14775001 chr2L_14775001 S1 320 chr2L 14803878 14803913 chr2L 14809082 14809117 copia 19 5203 4.0 8.0 6.0 2.7 5239 chr2L 14803878 intergenic not near genes chr2L 14806498 intergenic not near genes chr2L 14809117 intergenic not near genes chr2L_19_14805001 chr2L_14805001 S1 321 chr2L 14823224 14823255 chr2L 14823310 14823341 17 86 0.0 3.0 1.5 6.8 117 chr2L 14823224 intergenic not near genes chr2L 14823282 intergenic not near genes chr2L 14823341 intergenic not near genes chr2L_17_14820001 chr2L_14820001 S1 322 chr2L 14839748 14839779 chr2L 14839825 14839856 12 77 4.0 3.5 3.8 2.5 108 chr2L 14839748 intergenic not near genes chr2L 14839802 intergenic not near genes chr2L 14839856 intergenic not near genes chr2L_12_14835001 chr2L_14835001 S1 323 chr2L 14840975 14841010 chr2L 14841063 14841098 18 88 3.5 5.0 4.2 3.5 123 chr2L 14840975 3` UTR CR43805 - chr2L 14841036 3` UTR CR43805 - chr2L 14841098 3` UTR CR43805 - chr2L_18_14840001 chr2L_14840001 S1 324 chr2L 14854598 14854628 chr2L 14854684 14854714 14 86 3.5 3.0 3.2 3.3 116 chr2L 14854598 intergenic not near genes chr2L 14854656 intergenic not near genes chr2L 14854714 intergenic not near genes chr2L_14_14850001 chr2L_14850001 S1 325 chr2L 14859214 14859244 chr2L 14859291 14859321 7 77 3.5 1.0 2.2 2.2 107 chr2L 14859214 intergenic not near genes chr2L 14859268 intergenic not near genes chr2L 14859321 intergenic not near genes chr2L_7_14855001 chr2L_14855001 S1 326 chr2L 14889950 14889983 chr2L 14890376 14890409 jockey 12 426 5.0 7.0 6.0 1.7 459 chr2L 14889950 intergenic not near genes chr2L 14890180 intergenic not near genes chr2L 14890409 intergenic not near genes chr2L_12_14890001 chr2L_14890001 S1 327 chr2L 14984392 14984403 chr2L 14991995 14992006 opus 4 7603 4.0 8.0 6.0 0.6 7614 chr2L 14984392 intron mol - chr2L 14988199 intron mol - chr2L 14992006 intron mol - chr2L_4_14985001 chr2L_14985001 S1 328 chr2L 15013171 15013181 chr2L 15013281 15013291 5 110 0.0 6.5 3.2 1.2 120 chr2L 15013171 intergenic not near genes chr2L 15013231 intergenic not near genes chr2L 15013291 intergenic not near genes chr2L_5_15010001 chr2L_15010001 S1 329 chr2L 15021442 15021467 chr2L 15021519 15021544 13 77 8.0 4.0 6.0 1.9 102 chr2L 15021442 intron GABA-B-R1 + chr2L 15021493 intron GABA-B-R1 + chr2L 15021544 intron GABA-B-R1 + chr2L_13_15020001 chr2L_15020001 S1 330 chr2L 15044709 15044731 chr2L 15044786 15044808 11 77 4.0 0.0 2.0 3.7 99 chr2L 15044709 intergenic ck - chr2L 15044758 intergenic ck - chr2L 15044808 intergenic ck - chr2L_11_15040001 chr2L_15040001 S1 331 chr2L 15044733 15044745 chr2L 15044784 15044822 6 73 2.0 0.0 1.0 3.0 89 chr2L 15044733 intergenic ck - chr2L 15044778 intergenic ck - chr2L 15044822 intergenic ck - chr2L_6_15040001 chr2L_15040001 S1 332 chr2L 15078067 15078097 chr2L 15078156 15078186 7 89 2.5 1.0 1.8 2.5 119 chr2L 15078067 intron CG15270 + chr2L 15078126 intron CG15270 + chr2L 15078186 intron CG15270 + chr2L_7_15075001 chr2L_15075001 S1 333 chr2L 15098537 15098542 chr2L 15098618 15098623 4 81 10.0 7.5 8.8 0.4 86 chr2L 15098537 intergenic not near genes chr2L 15098580 intergenic not near genes chr2L 15098623 intergenic not near genes chr2L_4_15095001 chr2L_15095001 S1 334 chr2L 15122774 15122797 chr2L 15122855 15122878 8 81 4.5 2.0 3.2 1.9 104 chr2L 15122774 intergenic not near genes chr2L 15122826 intergenic not near genes chr2L 15122878 intergenic not near genes chr2L_8_15120001 chr2L_15120001 S1 335 chr2L 15226369 15226394 chr2L 15226446 15226471 4 77 1.5 3.5 2.5 1.1 102 chr2L 15226369 intergenic not near genes chr2L 15226420 intergenic not near genes chr2L 15226471 intergenic not near genes chr2L_4_15225001 chr2L_15225001 S1 336 chr2L 15309348 15309382 chr2L 15309452 15309486 11 104 3.0 2.0 2.5 3.1 138 chr2L 15309348 intergenic not near genes chr2L 15309417 intergenic not near genes chr2L 15309486 intergenic not near genes chr2L_11_15305001 chr2L_15305001 S1 337 chr2L 15375815 15375844 chr2L 15375928 15375957 8 113 1.5 3.0 2.2 2.5 142 chr2L 15375815 intergenic not near genes chr2L 15375886 intergenic not near genes chr2L 15375957 intergenic not near genes chr2L_8_15375001 chr2L_15375001 S1 338 chr2L 15446049 15446083 chr2L 15453519 15453553 blood 12 7470 2.5 3.0 2.8 3.2 7504 chr2L 15446049 intergenic not near genes chr2L 15449801 intergenic not near genes chr2L 15453553 intergenic not near genes chr2L_12_15445001 chr2L_15445001 S1 339 chr2L 15458282 15458287 chr2L 15458371 15458376 6 89 0.0 7.0 3.5 1.3 94 chr2L 15458282 intergenic not near genes chr2L 15458329 intergenic not near genes chr2L 15458376 intergenic not near genes chr2L_6_15455001 chr2L_15455001 S1 340 chr2L 15510933 15510964 chr2L 15511028 15511059 15 95 4.5 3.0 3.8 3.1 126 chr2L 15510933 intergenic not near genes chr2L 15510996 intergenic not near genes chr2L 15511059 intergenic not near genes chr2L_15_15510001 chr2L_15510001 S1 341 chr2L 15514323 15514330 chr2L 15514408 15514415 4 85 6.5 7.0 6.8 0.5 92 chr2L 15514323 intergenic not near genes chr2L 15514369 intergenic not near genes chr2L 15514415 intergenic not near genes chr2L_4_15510001 chr2L_15510001 S1 342 chr2L 15586413 15586443 chr2L 15593466 15593495 297 7 7053 3.0 4.0 3.5 1.6 7082 chr2L 15586413 intergenic not near genes chr2L 15589954 intergenic not near genes chr2L 15593495 intergenic not near genes chr2L_7_15585001 chr2L_15585001 S1 343 chr2L 15736972 15737006 chr2L 15737058 15737092 23 86 8.5 1.0 4.8 4.0 120 chr2L 15736972 intron CycE - chr2L 15737032 intron CycE - chr2L 15737092 intron CycE - chr2L_23_15735001 chr2L_15735001 S1 344 chr2L 15761098 15761107 chr2L 15761179 15761188 5 81 0.0 5.0 2.5 1.4 90 chr2L 15761098 intron Gli - chr2L 15761143 intron Gli - chr2L 15761188 intron Gli - chr2L_5_15760001 chr2L_15760001 S1 345 chr2L 15821063 15821077 chr2L 15821164 15821178 4 101 0.0 3.5 1.8 1.4 115 chr2L 15821063 intergenic not near genes chr2L 15821120 intergenic not near genes chr2L 15821178 intergenic not near genes chr2L_4_15820001 chr2L_15820001 S1 346 chr2L 15887716 15887745 chr2L 15887850 15887879 10 134 3.5 4.0 3.8 2.1 163 chr2L 15887716 intergenic not near genes chr2L 15887798 intergenic not near genes chr2L 15887879 intergenic not near genes chr2L_10_15885001 chr2L_15885001 S1 347 chr2L 15956020 15956058 chr2L 15957488 15957526 hobo 12 1468 2.5 4.0 3.2 2.9 1506 chr2L 15956020 intron beat-Ib - chr2L 15956773 intron beat-Ib - chr2L 15957526 intron beat-Ib - chr2L_12_15955001 chr2L_15955001 S1 348 chr2L 16001466 16001490 chr2L 16001555 16001579 7 89 0.5 5.0 2.8 1.8 113 chr2L 16001466 intron beat-Ic + chr2L 16001522 intron beat-Ic + chr2L 16001579 intron beat-Ic + chr2L_7_16000001 chr2L_16000001 S1 349 chr2L 10522357 10522358 chr2L 16071771 16071771 6 5549413 22.0 36.5 29.2 0.2 5549414 chr2L 10522357 intergenic not near genes chr2L 13297064 intron CG31729 + chr2L 16071771 intron beat-Ia + chr2L_6_13295001 chr2L_13295001 S1 350 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 13 145889 36.0 20.5 28.2 0.4 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_13_16140001 chr2L_16140001 S1 351 chr2L 16141162 16141195 chr2L 16146370 16146403 copia 20 5208 4.0 7.0 5.5 3.1 5241 chr2L 16141162 intergenic not near genes chr2L 16143782 intergenic not near genes chr2L 16146403 intergenic not near genes chr2L_20_16140001 chr2L_16140001 S1 352 chr2L 16153734 16153768 chr2L 16160789 16160823 297 18 7055 7.5 8.0 7.8 2.0 7089 chr2L 16153734 intergenic not near genes chr2L 16157278 intergenic not near genes chr2L 16160823 intergenic not near genes chr2L_18_16155001 chr2L_16155001 S1 353 chr2L 16197973 16197994 chr2L 16198108 16198129 8 135 5.0 4.5 4.8 1.4 156 chr2L 16197973 intergenic not near genes chr2L 16198051 intergenic not near genes chr2L 16198129 intergenic not near genes chr2L_8_16195001 chr2L_16195001 S1 354 chr2L 9084336 9084340 chr2L 16217660 16217660 18 7133322 30.0 20.5 25.2 0.7 7133324 chr2L 9084336 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_18_12650001 chr2L_12650001 S1 355 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 11 145889 36.0 20.5 28.2 0.4 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_11_16140001 chr2L_16140001 S1 356 chr2L 16217660 16217660 chr2L 18622718 18622719 8 2405058 21.0 41.5 31.2 0.2 2405059 chr2L 16217660 intergenic not near genes chr2L 17420190 intron Dif - chr2L 18622719 intron MESR3 + chr2L_8_17420001 chr2L_17420001 S1 357 chr2L 16224943 16224949 chr2L 16225072 16225078 6 128 10.0 14.0 12.0 0.5 135 chr2L 16224943 intergenic not near genes chr2L 16225010 intergenic not near genes chr2L 16225078 intergenic not near genes chr2L_6_16225001 chr2L_16225001 S1 358 chr2L 16280253 16280287 chr2L 16281425 16281459 1360 27 1171 6.5 6.0 6.2 3.8 1206 chr2L 16280253 intron crp - chr2L 16280856 intron crp - chr2L 16281459 intron crp - chr2L_27_16280001 chr2L_16280001 S1 359 chr2L 16363944 16363974 chr2L 16364191 16364220 8 247 2.0 0.0 1.0 4.0 276 chr2L 16363944 intergenic not near genes chr2L 16364082 intergenic not near genes chr2L 16364220 intergenic not near genes chr2L_8_16360001 chr2L_16360001 S1 360 chr2L 16375390 16375418 chr2L 16375482 16375509 7 91 5.0 0.0 2.5 2.0 119 chr2L 16375390 intergenic not near genes chr2L 16375450 intergenic not near genes chr2L 16375509 intergenic not near genes chr2L_7_16375001 chr2L_16375001 S1 361 chr2L 16391801 16391829 chr2L 16391878 16391906 8 77 4.0 3.0 3.5 1.8 105 chr2L 16391801 intergenic not near genes chr2L 16391854 intergenic not near genes chr2L 16391906 intergenic not near genes chr2L_8_16390001 chr2L_16390001 S1 362 chr2L 16504988 16505014 chr2L 16505099 16505125 12 110 3.5 3.0 3.2 2.9 137 chr2L 16504988 intron Tpr2 + chr2L 16505056 intron Tpr2 + chr2L 16505125 intron Tpr2 + chr2L_12_16505001 chr2L_16505001 S1 363 chr2L 16511960 16511991 chr2L 16519075 16519106 HMS-Beagle 5 7115 2.5 2.0 2.2 1.6 7146 chr2L 16511960 intron CG5953 - chr2L 16515533 intron CG5953 - chr2L 16519106 intron CG5953 - chr2L_5_16515001 chr2L_16515001 S1 364 chr2L 16629471 16629497 chr2L 16629581 16629609 12 115 0.0 3.0 1.5 4.8 138 chr2L 16629471 intron CG42389 + chr2L 16629540 intron CG42389 + chr2L 16629609 intron CG42389 + chr2L_12_16625001 chr2L_16625001 S1 365 chr2L 16654700 16654729 chr2L 16654794 16654823 9 94 3.0 5.5 4.2 1.7 123 chr2L 16654700 intron CG42389 + chr2L 16654762 intron CG42389 + chr2L 16654823 intron CG42389 + chr2L_9_16650001 chr2L_16650001 S1 366 chr2L 16764971 16765002 chr2L 16765052 16765083 7 81 3.0 4.5 3.8 1.5 112 chr2L 16764971 intergenic not near genes chr2L 16765027 intergenic not near genes chr2L 16765083 intergenic not near genes chr2L_7_16765001 chr2L_16765001 S1 367 chr2L 16952683 16952715 chr2L 16952793 16952825 15 110 6.0 4.0 5.0 2.5 142 chr2L 16952683 intergenic not near genes chr2L 16952754 intergenic not near genes chr2L 16952825 intergenic not near genes chr2L_15_16950001 chr2L_16950001 S1 368 chr2L 16958102 16958136 chr2L 16962891 16962925 Doc 8 4789 3.5 6.0 4.8 1.4 4823 chr2L 16958102 intergenic not near genes chr2L 16960514 intergenic not near genes chr2L 16962925 intergenic not near genes chr2L_8_16960001 chr2L_16960001 S1 369 chr2L 17032504 17032521 chr2L 17032590 17032607 5 86 4.0 4.5 4.2 1.0 103 chr2L 17032504 intergenic not near genes chr2L 17032556 intergenic not near genes chr2L 17032607 intergenic not near genes chr2L_5_17030001 chr2L_17030001 S1 370 chr2L 17050015 17050049 chr2L 17050103 17050137 18 86 3.0 7.0 5.0 3.0 122 chr2L 17050015 intergenic not near genes chr2L 17050076 intergenic not near genes chr2L 17050137 intergenic not near genes chr2L_18_17050001 chr2L_17050001 S1 371 chr2L 17052409 17052439 chr2L 17052522 17052552 7 113 1.0 1.0 1.0 3.5 143 chr2L 17052409 intergenic not near genes chr2L 17052480 intergenic not near genes chr2L 17052552 intergenic not near genes chr2L_7_17050001 chr2L_17050001 S1 372 chr2L 17062754 17062791 chr2L 17062837 17062874 8 83 2.5 2.0 2.2 2.5 120 chr2L 17062754 intergenic not near genes chr2L 17062814 intergenic not near genes chr2L 17062874 intergenic not near genes chr2L_8_17060001 chr2L_17060001 S1 373 chr2L 17070184 17070211 chr2L 17070295 17070322 9 111 2.0 5.5 3.8 1.9 138 chr2L 17070184 intergenic not near genes chr2L 17070253 intergenic not near genes chr2L 17070322 intergenic not near genes chr2L_9_17070001 chr2L_17070001 S1 374 chr2L 17095839 17095870 chr2L 17095961 17095992 17 121 3.0 2.5 2.8 4.5 153 chr2L 17095839 intergenic not near genes chr2L 17095916 intergenic not near genes chr2L 17095992 intergenic not near genes chr2L_17_17095001 chr2L_17095001 S1 375 chr2L 17097812 17097849 chr2L 17097892 17097929 16 80 5.5 4.5 5.0 2.7 117 chr2L 17097812 intergenic not near genes chr2L 17097870 intergenic not near genes chr2L 17097929 intergenic not near genes chr2L_16_17095001 chr2L_17095001 S1 376 chr2L 17121827 17121863 chr2L 17121907 17121943 17 80 2.5 3.0 2.8 4.5 116 chr2L 17121827 intergenic not near genes chr2L 17121885 intergenic not near genes chr2L 17121943 intergenic not near genes chr2L_17_17120001 chr2L_17120001 S1 377 chr2L 17122772 17122807 chr2L 17122858 17122893 24 85 6.5 4.5 5.5 3.7 121 chr2L 17122772 intergenic not near genes chr2L 17122832 intergenic CG31784 - chr2L 17122893 intergenic CG31784 - chr2L_24_17120001 chr2L_17120001 S1 378 chr2L 17164052 17164082 chr2L 17165299 17165330 13 1248 4.0 2.5 3.2 3.1 1278 chr2L 17164052 intron,intron CG34106 +,beat-IIIa + chr2L 17164691 intron,intron CG34106 +,beat-IIIa + chr2L 17165330 intron,intron CG34106 +,beat-IIIa + chr2L_13_17160001 chr2L_17160001 S1 379 chr2L 17167567 17167595 chr2L 17167809 17167837 pogo 8 242 5.5 3.0 4.2 1.5 270 chr2L 17167567 intron,intron CG34106 +,beat-IIIa + chr2L 17167702 intron,intron CG34106 +,beat-IIIa + chr2L 17167837 intron,intron CG34106 +,beat-IIIa + chr2L_8_17165001 chr2L_17165001 S1 380 chr2L 17199167 17199183 chr2L 17200635 17200651 hobo 4 1468 2.5 2.0 2.2 1.2 1484 chr2L 17199167 intron beat-IIIc - chr2L 17199909 intron beat-IIIc - chr2L 17200651 intron beat-IIIc - chr2L_4_17195001 chr2L_17195001 S1 381 chr2L 17234409 17234417 chr2L 17234515 17234523 4 106 4.0 2.0 3.0 1.0 114 chr2L 17234409 intron beat-IIIc - chr2L 17234466 intron beat-IIIc - chr2L 17234523 intron beat-IIIc - chr2L_4_17230001 chr2L_17230001 S1 382 chr2L 17273187 17273224 chr2L 17277971 17278008 F-element 15 4784 3.5 5.0 4.2 2.9 4821 chr2L 17273187 intergenic not near genes chr2L 17275598 intergenic not near genes chr2L 17278008 intergenic not near genes chr2L_15_17275001 chr2L_17275001 S1 383 chr2L 17332364 17332398 chr2L 17332462 17332496 11 98 2.0 4.5 3.2 2.6 132 chr2L 17332364 intergenic not near genes chr2L 17332430 intergenic not near genes chr2L 17332496 intergenic not near genes chr2L_11_17330001 chr2L_17330001 S1 384 chr2L 17360022 17360051 chr2L 17360201 17360230 9 179 2.5 0.0 1.2 4.1 208 chr2L 17360022 intergenic not near genes chr2L 17360126 intergenic not near genes chr2L 17360230 intergenic not near genes chr2L_9_17360001 chr2L_17360001 S1 385 chr2L 17403446 17403481 chr2L 17403534 17403569 7 88 1.0 1.0 1.0 3.5 123 chr2L 17403446 intron CLIP-190 + chr2L 17403508 intron CLIP-190 + chr2L 17403569 intron CLIP-190 + chr2L_7_17400001 chr2L_17400001 S1 386 chr2L 17424720 17424734 chr2L 17424833 17424847 7 113 4.5 3.5 4.0 1.4 127 chr2L 17424720 intron Dif - chr2L 17424784 intron Dif - chr2L 17424847 intron Dif - chr2L_7_17420001 chr2L_17420001 S1 387 chr2L 17425769 17425790 chr2L 17425897 17425918 6 128 3.0 4.0 3.5 1.3 149 chr2L 17425769 intron Dif - chr2L 17425844 intron Dif - chr2L 17425918 intron Dif - chr2L_6_17425001 chr2L_17425001 S1 388 chr2L 17432938 17432971 chr2L 17433035 17433068 13 97 2.5 3.0 2.8 3.4 130 chr2L 17432938 5` UTR Dif - chr2L 17433003 5` UTR Dif - chr2L 17433068 5` UTR Dif - chr2L_13_17430001 chr2L_17430001 S1 389 chr2L 17571155 17571162 chr2L 17571239 17571246 5 84 0.0 8.5 4.2 1.0 91 chr2L 17571155 intergenic not near genes chr2L 17571200 intergenic not near genes chr2L 17571246 intergenic not near genes chr2L_5_17570001 chr2L_17570001 S1 390 chr2L 17579883 17579918 chr2L 17579962 17579997 13 79 4.5 4.5 4.5 2.4 114 chr2L 17579883 5` UTR CR45698 + chr2L 17579940 5` UTR CR45698 + chr2L 17579997 5` UTR CR45698 + chr2L_13_17575001 chr2L_17575001 S1 391 chr2L 17607474 17607480 chr2L 17607573 17607579 6 99 3.0 0.0 1.5 2.4 105 chr2L 17607474 intergenic CR44412 - chr2L 17607526 intergenic CR44412 - chr2L 17607579 intergenic CR44412 - chr2L_6_17605001 chr2L_17605001 S1 392 chr2L 17623673 17623700 chr2L 17623904 17623931 9 231 5.0 4.0 4.5 1.6 258 chr2L 17623673 intergenic not near genes chr2L 17623802 intergenic not near genes chr2L 17623931 intergenic not near genes chr2L_9_17620001 chr2L_17620001 S1 393 chr2L 17665991 17666016 chr2L 17666076 17666101 14 85 2.5 4.0 3.2 3.3 110 chr2L 17665991 intron CadN - chr2L 17666046 intron CadN - chr2L 17666101 intron CadN - chr2L_14_17665001 chr2L_17665001 S1 394 chr2L 17727867 17727881 chr2L 17729335 17729349 hobo 7 1468 4.0 7.5 5.8 1.0 1482 chr2L 17727867 intron CadN - chr2L 17728608 intron CadN - chr2L 17729349 intron CadN - chr2L_7_17725001 chr2L_17725001 S1 395 chr2L 17730970 17731001 chr2L 17731118 17731149 9 148 5.0 2.0 3.5 2.0 179 chr2L 17730970 intron CadN - chr2L 17731060 intron CadN - chr2L 17731149 intron CadN - chr2L_9_17730001 chr2L_17730001 S1 396 chr2L 17819919 17819955 chr2L 17825123 17825159 copia 13 5204 3.5 8.0 5.8 1.9 5240 chr2L 17819919 intron CadN2 - chr2L 17822539 intron CadN2 - chr2L 17825159 intron CadN2 - chr2L_13_17820001 chr2L_17820001 S1 397 chr2L 17855494 17855525 chr2L 17855573 17855604 6 79 20.5 14.5 17.5 0.3 110 chr2L 17855494 intron CadN2 - chr2L 17855549 intron CadN2 - chr2L 17855604 intron CadN2 - chr2L_6_17855001 chr2L_17855001 S1 398 chr2L 17859615 17859640 chr2L 17859702 17859727 6 87 9.0 8.0 8.5 0.6 112 chr2L 17859615 intron CadN2 - chr2L 17859671 intron CadN2 - chr2L 17859727 intron CadN2 - chr2L_6_17855001 chr2L_17855001 S1 399 chr2L 17880002 17880025 chr2L 17880090 17880113 8 88 4.5 5.5 5.0 1.3 111 chr2L 17880002 intergenic not near genes chr2L 17880058 intergenic not near genes chr2L 17880113 intergenic not near genes chr2L_8_17880001 chr2L_17880001 S1 400 chr2L 17911956 17911990 chr2L 17914135 17914169 pogo 11 2183 5.0 4.0 4.5 2.0 2213 chr2L 17911956 intergenic not near genes chr2L 17913062 intergenic not near genes chr2L 17914169 intergenic CG43271 - chr2L_11_17910001 chr2L_17910001 S1 401 chr2L 17931387 17931402 chr2L 17931563 17931578 9 176 3.5 1.5 2.5 2.6 191 chr2L 17931387 intergenic not near genes chr2L 17931482 intergenic not near genes chr2L 17931578 intergenic not near genes chr2L_9_17930001 chr2L_17930001 S1 402 chr2L 17951942 17951980 chr2L 17953410 17953448 hobo 7 1468 3.5 5.0 4.2 1.3 1506 chr2L 17951942 intergenic CR44398 -,CR44397 - chr2L 17952695 intergenic not near genes chr2L 17953448 intergenic not near genes chr2L_7_17950001 chr2L_17950001 S1 403 chr2L 17990007 17990017 chr2L 17990072 17990094 7 74 12.0 11.0 11.5 0.6 87 chr2L 17990007 intergenic Prosbeta5R2 + chr2L 17990050 intergenic Prosbeta5R2 + chr2L 17990094 intergenic Prosbeta5R2 + chr2L_7_17990001 chr2L_17990001 S1 404 chr2L 18040726 18040750 chr2L 18040816 18040840 7 90 10.5 9.0 9.8 0.6 114 chr2L 18040726 intron rdo + chr2L 18040783 intron rdo + chr2L 18040840 intron rdo + chr2L_7_18040001 chr2L_18040001 S1 405 chr2L 18041428 18041462 chr2L 18041698 18041732 7 270 8.5 8.0 8.2 0.8 304 chr2L 18041428 intron rdo + chr2L 18041580 intron rdo + chr2L 18041732 intron rdo + chr2L_7_18040001 chr2L_18040001 S1 406 chr2L 18047037 18047058 chr2L 18047119 18047141 10 83 18.5 16.0 17.2 0.5 104 chr2L 18047037 intron rdo + chr2L 18047089 intron rdo + chr2L 18047141 intron rdo + chr2L_10_18045001 chr2L_18045001 S1 407 chr2L 18051873 18051909 chr2L 18061021 18061057 roo 17 9148 5.0 3.5 4.2 3.3 9184 chr2L 18051873 intron rdo + chr2L 18056465 intron rdo + chr2L 18061057 intron rdo + chr2L_17_18055001 chr2L_18055001 S1 408 chr2L 18111243 18111263 chr2L 18111335 18111354 13 92 6.0 6.5 6.2 1.8 111 chr2L 18111243 intergenic not near genes chr2L 18111298 intergenic not near genes chr2L 18111354 intergenic not near genes chr2L_13_18110001 chr2L_18110001 S1 409 chr2L 18263093 18263126 chr2L 18263189 18263222 6 96 13.5 9.5 11.5 0.5 129 chr2L 18263093 intron CG42750 - chr2L 18263158 intron CG42750 - chr2L 18263222 intron CG42750 - chr2L_6_18260001 chr2L_18260001 S1 410 chr2L 18285990 18286012 chr2L 18286622 18286644 6 632 20.5 13.0 16.8 0.3 654 chr2L 18285990 intergenic CG31787 - chr2L 18286317 intergenic not near genes chr2L 18286644 intergenic not near genes chr2L_6_18285001 chr2L_18285001 S1 411 chr2L 18331058 18331074 chr2L 18331178 18331194 4 120 10.5 16.0 13.2 0.3 136 chr2L 18331058 intron Fas3 + chr2L 18331126 intron Fas3 + chr2L 18331194 intron Fas3 + chr2L_4_18330001 chr2L_18330001 S1 412 chr2L 18408025 18408058 chr2L 18412810 18412838 Doc 7 4784 3.5 4.5 4.0 1.4 4813 chr2L 18408025 intergenic not near genes chr2L 18410432 intergenic not near genes chr2L 18412838 intergenic not near genes chr2L_7_18410001 chr2L_18410001 S1 413 chr2L 18449499 18449521 chr2L 18449586 18449609 4 88 17.0 16.0 16.5 0.2 110 chr2L 18449499 intergenic bsf - chr2L 18449554 3` UTR bsf - chr2L 18449609 3` UTR bsf - chr2L_4_18445001 chr2L_18445001 S1 414 chr2L 18481025 18481045 chr2L 18481156 18481176 7 129 12.5 9.0 10.8 0.6 151 chr2L 18481025 intron CG10283 - chr2L 18481100 intron CG10283 - chr2L 18481176 intron CG10283 - chr2L_7_18480001 chr2L_18480001 S1 415 chr2L 18538567 18538597 chr2L 18538650 18538679 9 82 6.0 9.5 7.8 1.0 112 chr2L 18538567 intron Pde11 - chr2L 18538623 intron Pde11 - chr2L 18538679 intron Pde11 - chr2L_9_18535001 chr2L_18535001 S1 416 chr2L 18643961 18643997 chr2L 18696581 18696617 7 52620 46.0 43.5 44.8 0.2 52656 chr2L 18643961 intron MESR3 + chr2L 18670289 intron CG43338 - chr2L 18696617 exon CG10338 + chr2L_7_18670001 chr2L_18670001 S1 417 chr2L 18624084 18624105 chr2L 18722320 18722343 7 98235 22.5 24.5 23.5 0.3 98259 chr2L 18624084 intron MESR3 + chr2L 18673214 exon CG43339 - chr2L 18722343 intron CG10348 - chr2L_7_18670001 chr2L_18670001 S1 418 chr2L 18758885 18758909 chr2L 18758966 18758990 6 81 22.5 20.0 21.2 0.3 105 chr2L 18758885 intergenic not near genes chr2L 18758938 intergenic not near genes chr2L 18758990 intergenic not near genes chr2L_6_18755001 chr2L_18755001 S1 419 chr2L 18811406 18811434 chr2L 18811489 18811517 6 83 3.0 0.0 1.5 2.4 111 chr2L 18811406 intergenic CG10570 -,CG42502 - chr2L 18811462 intergenic CG10570 -,CG42502 - chr2L 18811517 intergenic not near genes chr2L_6_18810001 chr2L_18810001 S1 420 chr2L 18812562 18812589 chr2L 18812826 18812853 13 264 2.0 7.0 4.5 2.4 291 chr2L 18812562 intergenic CG17325 +,CG42305 + chr2L 18812708 5` UTR,5` UTR CG17325 +,CG42305 + chr2L 18812853 5` UTR,5` UTR CG17325 +,CG42305 + chr2L_13_18810001 chr2L_18810001 S1 421 chr2L 18883866 18883888 chr2L 18883949 18883971 4 83 17.5 13.5 15.5 0.2 105 chr2L 18883866 intergenic not near genes chr2L 18883918 intergenic not near genes chr2L 18883971 intergenic not near genes chr2L_4_18880001 chr2L_18880001 S1 422 chr2L 18898397 18898427 chr2L 18898480 18898510 14 83 13.5 9.5 11.5 1.1 113 chr2L 18898397 intergenic not near genes chr2L 18898454 intergenic not near genes chr2L 18898510 intergenic not near genes chr2L_14_18895001 chr2L_18895001 S1 423 chr2L 18981391 18981418 chr2L 18981475 18981502 8 84 26.0 21.5 23.8 0.3 111 chr2L 18981391 intron Swip-1 - chr2L 18981446 intron Swip-1 - chr2L 18981502 intron Swip-1 - chr2L_8_18980001 chr2L_18980001 S1 424 chr2L 18983380 18983385 chr2L 18983462 18983483 4 94 4.0 12.5 8.2 0.4 103 chr2L 18983380 intron Swip-1 - chr2L 18983432 intron Swip-1 - chr2L 18983483 intron Swip-1 - chr2L_4_18980001 chr2L_18980001 S1 425 chr2L 19144926 19145195 chr2L 19145005 19145283 14 82 9.5 10.5 10.0 1.3 357 chr2L 19144926 intron brat + chr2L 19145104 intron brat + chr2L 19145283 intron brat + chr2L_14_19145001 chr2L_19145001 S1 426 chr2L 19147367 19147403 chr2L 19154403 19154439 297 14 7036 1.0 4.5 2.8 3.7 7072 chr2L 19147367 intron brat + chr2L 19150903 intron brat + chr2L 19154439 intron brat + chr2L_14_19150001 chr2L_19150001 S1 427 chr2L 19331661 19331698 chr2L 19331741 19331778 17 77 5.5 5.0 5.2 2.7 117 chr2L 19331661 intergenic not near genes chr2L 19331720 intergenic not near genes chr2L 19331778 intergenic not near genes chr2L_17_19330001 chr2L_19330001 S1 428 chr2L 19345014 19345047 chr2L 19357224 19357257 blood 11 12210 3.0 3.5 3.2 2.6 12243 chr2L 19345014 intron dnt - chr2L 19351136 intron dnt - chr2L 19357257 intron dnt - chr2L_11_19350001 chr2L_19350001 S1 429 chr2L 19357545 19357566 chr2L 19357636 19357657 12 91 9.5 8.0 8.8 1.2 112 chr2L 19357545 intron dnt - chr2L 19357601 intron dnt - chr2L 19357657 intron dnt - chr2L_12_19355001 chr2L_19355001 S1 430 chr2L 19393961 19393995 chr2L 19394076 19394110 8 115 6.5 6.0 6.2 1.1 149 chr2L 19393961 intron CG17544 - chr2L 19394036 intron CG17544 - chr2L 19394110 intron CG17544 - chr2L_8_19390001 chr2L_19390001 S1 431 chr2L 19405617 19405642 chr2L 19405708 19405733 4 91 1.5 1.0 1.2 1.8 116 chr2L 19405617 intron Pax - chr2L 19405675 intron Pax - chr2L 19405733 intron Pax - chr2L_4_19405001 chr2L_19405001 S1 432 chr2L 19407715 19407740 chr2L 19407913 19407938 7 198 8.5 13.5 11.0 0.6 223 chr2L 19407715 intron Pax - chr2L 19407826 intron Pax - chr2L 19407938 intron Pax - chr2L_7_19405001 chr2L_19405001 S1 433 chr2L 19441066 19441089 chr2L 19441144 19441167 8 78 8.0 10.0 9.0 0.8 101 chr2L 19441066 intron CG10237 - chr2L 19441116 intron CG10237 - chr2L 19441167 5` UTR CG10237 - chr2L_8_19440001 chr2L_19440001 S1 434 chr2L 19469173 19469201 chr2L 19469258 19469287 11 86 10.5 11.0 10.8 0.9 114 chr2L 19469173 5` UTR CR45722 + chr2L 19469230 5` UTR CR45722 + chr2L 19469287 5` UTR CR45722 + chr2L_11_19465001 chr2L_19465001 S1 435 chr2L 19550260 19550291 chr2L 19550413 19550444 9 153 7.0 9.0 8.0 1.0 184 chr2L 19550260 intron Tep4 + chr2L 19550352 intron Tep4 + chr2L 19550444 intron Tep4 + chr2L_9_19550001 chr2L_19550001 S1 436 chr2L 19601572 19601601 chr2L 19601650 19601679 10 78 1.0 4.5 2.8 2.6 107 chr2L 19601572 intron,intron Lar +,CR44978 - chr2L 19601626 intron,intron Lar +,CR44978 - chr2L 19601679 intron,intron Lar +,CR44978 - chr2L_10_19600001 chr2L_19600001 S1 437 chr2L 19620091 19620132 chr2L 19621081 19621122 jockey 31 988 5.0 6.0 5.5 4.8 1031 chr2L 19620091 intron Lar + chr2L 19620606 intron Lar + chr2L 19621122 intron Lar + chr2L_31_19620001 chr2L_19620001 S1 438 chr2L 19652571 19652602 chr2L 19674008 19674039 opus 10 21437 3.5 4.5 4.0 2.0 21468 chr2L 19652571 intron Lar + chr2L 19663305 intron Lar + chr2L 19674039 intron Lar + chr2L_10_19660001 chr2L_19660001 S1 439 chr2L 19683224 19683259 chr2L 19683303 19683338 17 79 5.5 1.5 3.5 3.8 114 chr2L 19683224 intron Lar + chr2L 19683281 intron Lar + chr2L 19683338 intron Lar + chr2L_17_19680001 chr2L_19680001 S1 440 chr2L 19696566 19696570 chr2L 19696668 19696672 4 102 5.0 8.5 6.8 0.5 106 chr2L 19696566 intron Lar + chr2L 19696619 intron Lar + chr2L 19696672 intron Lar + chr2L_4_19695001 chr2L_19695001 S1 441 chr2L 19703536 19703569 chr2L 19712673 19712706 roo 19 9137 6.0 5.5 5.8 2.8 9170 chr2L 19703536 intron Lar + chr2L 19708121 intron Lar + chr2L 19712706 intron Lar + chr2L_19_19705001 chr2L_19705001 S1 442 chr2L 19737352 19737389 chr2L 19740822 19740852 1360 17 3469 4.5 7.5 6.0 2.4 3500 chr2L 19737352 intergenic Nf-YB + chr2L 19739102 intergenic not near genes chr2L 19740852 intergenic not near genes chr2L_17_19735001 chr2L_19735001 S1 443 chr2L 19762809 19762834 chr2L 19763052 19763077 pogo 12 242 4.5 6.5 5.5 1.8 268 chr2L 19762809 5` UTR fbp - chr2L 19762943 intron fbp - chr2L 19763077 intron fbp - chr2L_12_19760001 chr2L_19760001 S1 444 chr2L 19773171 19773193 chr2L 19773259 19773281 6 88 3.0 3.5 3.2 1.4 110 chr2L 19773171 intergenic not near genes chr2L 19773226 intergenic not near genes chr2L 19773281 intergenic not near genes chr2L_6_19770001 chr2L_19770001 S1 445 chr2L 19824420 19824432 chr2L 19824504 19824516 5 84 2.5 4.5 3.5 1.1 96 chr2L 19824420 intron sick + chr2L 19824468 intron sick + chr2L 19824516 intron sick + chr2L_5_19820001 chr2L_19820001 S1 446 chr2L 19837274 19837310 chr2L 19837355 19837391 24 81 5.5 5.0 5.2 3.9 117 chr2L 19837274 intron sick + chr2L 19837332 intron sick + chr2L 19837391 intron sick + chr2L_24_19835001 chr2L_19835001 S1 447 chr2L 19846243 19846277 chr2L 19846325 19846351 14 81 0.0 3.5 1.8 5.0 108 chr2L 19846243 intron sick + chr2L 19846297 intron sick + chr2L 19846351 intron sick + chr2L_14_19845001 chr2L_19845001 S1 448 chr2L 19901486 19901520 chr2L 19901590 19901624 11 103 1.5 5.0 3.2 2.6 138 chr2L 19901486 intron sick + chr2L 19901555 intron sick + chr2L 19901624 intron sick + chr2L_11_19900001 chr2L_19900001 S1 449 chr2L 19911287 19911325 chr2L 19911376 19911413 26 89 8.0 7.5 7.8 3.0 126 chr2L 19911287 intron,3` UTR sick +,CR43097 - chr2L 19911350 intron,3` UTR sick +,CR43097 - chr2L 19911413 intron,3` UTR sick +,CR43097 - chr2L_26_19910001 chr2L_19910001 S1 450 chr2L 20005874 20005903 chr2L 20010951 20010980 flea 13 5077 4.5 5.5 5.0 2.2 5106 chr2L 20005874 intron CG43861 - chr2L 20008427 intron CG43861 - chr2L 20010980 intron CG43861 - chr2L_13_20005001 chr2L_20005001 S1 451 chr2L 20035672 20035704 chr2L 20035900 20035932 12 228 2.5 6.0 4.2 2.3 260 chr2L 20035672 intron sNPF + chr2L 20035802 intron sNPF + chr2L 20035932 intron sNPF + chr2L_12_20035001 chr2L_20035001 S1 452 chr2L 20036533 20036555 chr2L 20036618 20036640 9 85 2.5 8.0 5.2 1.5 107 chr2L 20036533 intron sNPF + chr2L 20036586 intron sNPF + chr2L 20036640 intron sNPF + chr2L_9_20035001 chr2L_20035001 S1 453 chr2L 20069526 20069554 chr2L 20069607 20069635 16 80 5.0 5.5 5.2 2.6 109 chr2L 20069526 intron bwa + chr2L 20069580 intron bwa + chr2L 20069635 intron bwa + chr2L_16_20065001 chr2L_20065001 S1 454 chr2L 20079513 20079546 chr2L 20079635 20079668 9 122 1.5 1.0 1.2 4.1 155 chr2L 20079513 intron,intron neb +,fok - chr2L 20079590 intron,intron neb +,fok - chr2L 20079668 intron,intron neb +,fok - chr2L_9_20075001 chr2L_20075001 S1 455 chr2L 20124325 20124360 chr2L 20124404 20124439 7 79 3.5 3.0 3.2 1.7 114 chr2L 20124325 intergenic not near genes chr2L 20124382 intergenic not near genes chr2L 20124439 intergenic not near genes chr2L_7_20120001 chr2L_20120001 S1 456 chr2L 20246746 20246779 chr2L 20246834 20246867 13 86 10.5 8.5 9.5 1.2 121 chr2L 20246746 intergenic not near genes chr2L 20246806 intergenic not near genes chr2L 20246867 intergenic not near genes chr2L_13_20245001 chr2L_20245001 S1 457 chr2L 20272111 20272145 chr2L 20282823 20282857 copia 20 10711 5.0 8.5 6.8 2.6 10746 chr2L 20272111 intergenic not near genes chr2L 20277484 intergenic not near genes chr2L 20282857 intergenic not near genes chr2L_20_20275001 chr2L_20275001 S1 458 chr2L 20296505 20296538 chr2L 20296587 20296620 10 82 1.5 3.5 2.5 2.9 115 chr2L 20296505 intergenic CR43414 - chr2L 20296562 intergenic CR43414 - chr2L 20296620 intergenic CR43414 - chr2L_10_20295001 chr2L_20295001 S1 459 chr2L 20299411 20299445 chr2L 20299535 20299569 14 124 0.0 1.5 0.8 7.8 158 chr2L 20299411 intergenic not near genes chr2L 20299490 intergenic not near genes chr2L 20299569 intergenic not near genes chr2L_14_20295001 chr2L_20295001 S1 460 chr2L 20300001 20300016 chr2L 20300090 20300105 10 89 11.0 6.5 8.8 1.0 104 chr2L 20300001 intergenic not near genes chr2L 20300053 intergenic not near genes chr2L 20300105 intergenic not near genes chr2L_10_20300001 chr2L_20300001 S1 461 chr2L 20303169 20303188 chr2L 20310638 20310657 blood 5 7469 0.0 6.5 3.2 1.2 7488 chr2L 20303169 intergenic not near genes chr2L 20306913 intergenic not near genes chr2L 20310657 intergenic not near genes chr2L_5_20305001 chr2L_20305001 S1 462 chr2L 20310884 20310919 chr2L 20310965 20310999 7 80 1.5 5.5 3.5 1.6 115 chr2L 20310884 intergenic spir + chr2L 20310942 intergenic spir + chr2L 20310999 intergenic spir + chr2L_7_20310001 chr2L_20310001 S1 463 chr2L 20336072 20336100 chr2L 20336158 20336186 13 86 3.5 4.5 4.0 2.6 114 chr2L 20336072 intron spir + chr2L 20336129 intron spir + chr2L 20336186 intron spir + chr2L_13_20335001 chr2L_20335001 S1 464 chr2L 20344826 20344853 chr2L 20344903 20344930 8 77 3.0 3.0 3.0 2.0 104 chr2L 20344826 intron spir + chr2L 20344878 intron spir + chr2L 20344930 intron spir + chr2L_8_20340001 chr2L_20340001 S1 465 chr2L 20420114 20420144 chr2L 20420192 20420222 10 76 3.0 4.5 3.8 2.1 108 chr2L 20420114 intron Arpc2 + chr2L 20420168 intron Arpc2 + chr2L 20420222 intron Arpc2 + chr2L_10_20420001 chr2L_20420001 S1 466 chr2L 20429680 20429702 chr2L 20429795 20429801 5 112 4.5 4.0 4.2 1.0 121 chr2L 20429680 intron CG31688 + chr2L 20429740 intron CG31688 + chr2L 20429801 intron CG31688 + chr2L_5_20425001 chr2L_20425001 S1 467 chr2L 20498687 20498704 chr2L 20498787 20498804 9 100 6.5 9.5 8.0 1.0 117 chr2L 20498687 intergenic not near genes chr2L 20498746 intergenic not near genes chr2L 20498804 intergenic not near genes chr2L_9_20495001 chr2L_20495001 S1 468 chr2L 20524189 20524212 chr2L 20524272 20524295 6 83 2.5 0.0 1.2 2.7 106 chr2L 20524189 intergenic not near genes chr2L 20524242 intergenic not near genes chr2L 20524295 intergenic not near genes chr2L_6_20520001 chr2L_20520001 S1 469 chr2L 20530767 20530800 chr2L 20530907 20530940 14 139 4.0 3.5 3.8 2.9 173 chr2L 20530767 intergenic CG44270 + chr2L 20530854 intergenic CG44270 + chr2L 20530940 intergenic CG44270 + chr2L_14_20530001 chr2L_20530001 S1 470 chr2L 20568660 20568687 chr2L 20569051 20569078 X-element 15 391 2.5 3.5 3.0 3.8 418 chr2L 20568660 intron CR45347 + chr2L 20568869 intron CR45347 + chr2L 20569078 intron CR45347 + chr2L_15_20565001 chr2L_20565001 S1 471 chr2L 20576236 20576251 chr2L 20583706 20583721 blood 6 7470 3.5 6.5 5.0 1.0 7485 chr2L 20576236 intergenic not near genes chr2L 20579978 intergenic not near genes chr2L 20583721 3` UTR CR44909 - chr2L_6_20575001 chr2L_20575001 S1 472 chr2L 20601785 20601816 chr2L 20601864 20601887 14 78 3.5 2.5 3.0 3.5 102 chr2L 20601785 intron CR44909 - chr2L 20601836 intron CR44909 - chr2L 20601887 intron CR44909 - chr2L_14_20600001 chr2L_20600001 S1 473 chr2L 20611236 20611266 chr2L 20611326 20611356 14 89 0.0 7.0 3.5 3.1 120 chr2L 20611236 intron CR44909 - chr2L 20611296 intron CR44909 - chr2L 20611356 intron CR44909 - chr2L_14_20610001 chr2L_20610001 S1 474 chr2L 20639515 20639529 chr2L 20639776 20639805 INE-1 4 273 3.0 5.5 4.2 0.8 290 chr2L 20639515 intergenic not near genes chr2L 20639660 intergenic CG31680 + chr2L 20639805 intergenic CG31680 + chr2L_4_20635001 chr2L_20635001 S1 475 chr2L 20668686 20668722 chr2L 20668763 20668799 12 77 7.0 6.0 6.5 1.6 113 chr2L 20668686 intron CG31678 - chr2L 20668742 intron CG31678 - chr2L 20668799 intron CG31678 - chr2L_12_20665001 chr2L_20665001 S1 476 chr2L 20695793 20695829 chr2L 20695882 20695918 18 89 4.5 2.5 3.5 4.0 125 chr2L 20695793 intron Hr38 - chr2L 20695856 intron Hr38 - chr2L 20695918 intron Hr38 - chr2L_18_20695001 chr2L_20695001 S1 477 chr2L 20801679 20801690 chr2L 20801759 20801770 8 80 2.0 0.0 1.0 4.0 91 chr2L 20801679 intron CG9328 + chr2L 20801724 intron CG9328 + chr2L 20801770 intron CG9328 + chr2L_8_20800001 chr2L_20800001 S1 478 chr2L 20835806 20835839 chr2L 20836524 20836557 Quasimodo 8 718 4.5 4.0 4.2 1.5 751 chr2L 20835806 5` UTR Oseg5 - chr2L 20836182 intergenic Oseg5 -,Spn38F - chr2L 20836557 intergenic Spn38F - chr2L_8_20835001 chr2L_20835001 S1 479 chr2L 20840024 20840059 chr2L 20840237 20840272 21 212 5.5 4.5 5.0 3.5 248 chr2L 20840024 intergenic not near genes chr2L 20840148 intergenic not near genes chr2L 20840272 intergenic CG31676 + chr2L_21_20840001 chr2L_20840001 S1 480 chr2L 20846758 20846795 chr2L 20846843 20846880 19 85 4.5 3.0 3.8 4.0 122 chr2L 20846758 intron CG31676 + chr2L 20846819 intron CG31676 + chr2L 20846880 intron CG31676 + chr2L_19_20845001 chr2L_20845001 S1 481 chr2L 10476072 10476078 chr2L 20875591 20875592 4 10399518 22.5 16.5 19.5 0.2 10399520 chr2L 10476072 intergenic not near genes chr2L 15675832 intron,exon,exon CG4587 -,CG43923 -,CG43924 - chr2L 20875592 intron,intron CG43739 -,sky - chr2L_4_15675001 chr2L_15675001 S1 482 chr2L 20881880 20881916 chr2L 20881973 20882009 25 92 4.0 4.5 4.2 4.8 129 chr2L 20881880 intron,intron CG43739 -,sky - chr2L 20881944 intron,intron CG43739 -,sky - chr2L 20882009 3` UTR,exon CG43739 -,sky - chr2L_25_20880001 chr2L_20880001 S1 483 chr2L 20891533 20891541 chr2L 20896635 20896643 jockey 7 5102 2.5 5.5 4.0 1.4 5110 chr2L 20891533 intron,intron CG43739 -,sky - chr2L 20894088 intron,intron CG43739 -,sky - chr2L 20896643 intron,intron CG43739 -,sky - chr2L_7_20890001 chr2L_20890001 S1 484 chr2L 20901474 20901488 chr2L 20902629 20902653 1360 6 1163 3.0 7.5 5.2 1.0 1179 chr2L 20901474 intron,intron CG43739 -,sky - chr2L 20902064 intron,intron CG43739 -,sky - chr2L 20902653 intron,intron CG43739 -,sky - chr2L_6_20900001 chr2L_20900001 S1 485 chr2L 20911027 20911061 chr2L 20911104 20911138 22 76 6.0 3.5 4.8 3.8 111 chr2L 20911027 intron,intron CG43739 -,sky - chr2L 20911082 intron,intron CG43739 -,sky - chr2L 20911138 intron,intron CG43739 -,sky - chr2L_22_20910001 chr2L_20910001 S1 486 chr2L 20946944 20946961 chr2L 20947032 20947037 10 87 3.0 7.5 5.2 1.6 93 chr2L 20946944 intergenic CR44606 - chr2L 20946990 intergenic CR44606 - chr2L 20947037 intergenic CR44606 - chr2L_10_20945001 chr2L_20945001 S1 487 chr2L 20967081 20967107 chr2L 20967168 20967194 12 87 8.0 5.5 6.8 1.5 113 chr2L 20967081 3` UTR CG42238 - chr2L 20967138 3` UTR CG42238 - chr2L 20967194 3` UTR CG42238 - chr2L_12_20965001 chr2L_20965001 S1 488 chr2L 20976640 20976675 chr2L 20981456 20981491 X-element 6 4816 4.0 5.5 4.8 1.0 4851 chr2L 20976640 intron CG42238 - chr2L 20979066 intron CG42238 - chr2L 20981491 intron CG42238 - chr2L_6_20975001 chr2L_20975001 S1 489 chr2L 20991034 20991067 chr2L 20991113 20991146 21 79 6.0 5.0 5.5 3.2 112 chr2L 20991034 intron CG42238 - chr2L 20991090 intron CG42238 - chr2L 20991146 intron CG42238 - chr2L_21_20990001 chr2L_20990001 S1 490 chr2L 21020273 21020295 chr2L 21023951 21023973 NOF 14 3678 7.0 3.0 5.0 2.3 3700 chr2L 21020273 intron CG42238 - chr2L 21022123 intron CG42238 - chr2L 21023973 intron CG42238 - chr2L_14_21020001 chr2L_21020001 S1 491 chr2L 21041140 21041165 chr2L 21049402 21049427 Tirant 13 8262 4.5 5.0 4.8 2.2 8287 chr2L 21041140 intron CG42238 - chr2L 21045284 intron CG42238 - chr2L 21049427 intron CG42238 - chr2L_13_21045001 chr2L_21045001 S1 492 chr2L 21074920 21074944 chr2L 21075012 21075036 10 92 3.5 3.0 3.2 2.4 116 chr2L 21074920 intergenic tadr + chr2L 21074978 intergenic tadr + chr2L 21075036 intergenic tadr + chr2L_10_21070001 chr2L_21070001 S1 493 chr2L 21086422 21086456 chr2L 21086538 21086572 15 116 3.0 4.0 3.5 3.3 150 chr2L 21086422 5` UTR CG33509 - chr2L 21086497 5` UTR CG33509 - chr2L 21086572 intergenic CG33509 -,ppk13 - chr2L_15_21085001 chr2L_21085001 S1 494 chr2L 21088919 21088942 chr2L 21089003 21089026 10 84 6.0 1.5 3.8 2.1 107 chr2L 21088919 intergenic ppk13 -,CG9259 + chr2L 21088972 intergenic ppk13 -,CG9259 + chr2L 21089026 intergenic ppk13 -,CG9259 + chr2L_10_21085001 chr2L_21085001 S1 495 chr2L 21158876 21158915 chr2L 21158954 21158993 19 77 4.0 4.5 4.2 3.7 117 chr2L 21158876 intergenic CG9248 +,CG9249 - chr2L 21158934 5` UTR CG9248 + chr2L 21158993 5` UTR CG9248 + chr2L_19_21155001 chr2L_21155001 S1 496 chr2L 21245273 21245305 chr2L 21245515 21245547 23 242 0.0 7.0 3.5 5.1 274 chr2L 21245273 intron Hr39 + chr2L 21245410 intron Hr39 + chr2L 21245547 intron Hr39 + chr2L_23_21245001 chr2L_21245001 S1 497 chr2L 21286603 21286617 chr2L 21286682 21286696 5 79 3.5 1.0 2.2 1.6 93 chr2L 21286603 exon Mio - chr2L 21286650 intron Mio - chr2L 21286696 intron Mio - chr2L_5_21285001 chr2L_21285001 S1 498 chr2L 21355614 21355621 chr2L 21355760 21355767 5 146 3.5 2.5 3.0 1.2 153 chr2L 21355614 intron Tsp39D + chr2L 21355690 intron Tsp39D + chr2L 21355767 intron Tsp39D + chr2L_5_21355001 chr2L_21355001 S1 499 chr2L 21392213 21392244 chr2L 21392300 21392331 7 87 1.0 1.5 1.2 3.2 118 chr2L 21392213 3` UTR nrv3 + chr2L 21392272 3` UTR nrv3 + chr2L 21392331 3` UTR nrv3 + chr2L_7_21390001 chr2L_21390001 S1 500 chr2L 21597026 21597057 chr2L 21604771 21604802 roo 12 7745 4.0 3.5 3.8 2.5 7776 chr2L 21597026 intergenic not near genes chr2L 21600914 intergenic not near genes chr2L 21604802 intergenic not near genes chr2L_12_21600001 chr2L_21600001 S1 501 chr2L 21691824 21691855 chr2L 21698295 21698326 Burdock 11 6470 3.5 1.0 2.2 3.4 6502 chr2L 21691824 intron CG31619 + chr2L 21695075 intron CG31619 + chr2L 21698326 intron CG31619 + chr2L_11_21695001 chr2L_21695001 S1 502 chr2L 21750126 21750135 chr2L 21750450 21750459 6 324 1.5 10.0 5.8 0.9 333 chr2L 21750126 intron step - chr2L 21750292 intron step - chr2L 21750459 intron step - chr2L_6_21750001 chr2L_21750001 S1 503 chr2L 21754658 21754682 chr2L 21754740 21754764 6 82 2.5 4.0 3.2 1.4 106 chr2L 21754658 intron step - chr2L 21754711 intron step - chr2L 21754764 intron step - chr2L_6_21750001 chr2L_21750001 S1 504 chr2L 21771985 21772013 chr2L 21772065 21772093 7 80 1.5 6.5 4.0 1.4 108 chr2L 21771985 intron CG31612 - chr2L 21772039 intron CG31612 - chr2L 21772093 intron CG31612 - chr2L_7_21770001 chr2L_21770001 S1 505 chr2L 21819327 21819361 chr2L 21819416 21819450 22 88 3.5 5.5 4.5 4.0 123 chr2L 21819327 intergenic CR44786 + chr2L 21819388 intergenic CR44786 + chr2L 21819450 intergenic CR44786 + chr2L_22_21815001 chr2L_21815001 S1 506 chr2L 21824124 21824156 chr2L 21824212 21824244 9 88 0.0 3.5 1.8 3.2 120 chr2L 21824124 intergenic not near genes chr2L 21824184 intergenic not near genes chr2L 21824244 intergenic not near genes chr2L_9_21820001 chr2L_21820001 S1 507 chr2L 21869088 21869102 chr2L 21869178 21869192 8 88 12.0 13.0 12.5 0.6 104 chr2L 21869088 5` UTR CR44917 + chr2L 21869140 5` UTR CR44917 + chr2L 21869192 5` UTR CR44917 + chr2L_8_21865001 chr2L_21865001 S1 508 chr2L 21953795 21953824 chr2L 21954695 21954724 17 900 39.5 40.0 39.8 0.4 929 chr2L 21953795 intergenic not near genes chr2L 21954260 intergenic not near genes chr2L 21954724 intergenic not near genes chr2L_17_21950001 chr2L_21950001 S1 509 chr2L 21981682 21981715 chr2L 21990848 21990881 roo 21 9166 5.0 8.0 6.5 2.8 9199 chr2L 21981682 exon CG2528 - chr2L 21986282 intron CG2528 - chr2L 21990881 exon CG2528 - chr2L_21_21985001 chr2L_21985001 S1 510 chr2L 21996940 21996970 chr2L 21997022 21997052 10 82 1.5 1.5 1.5 4.0 112 chr2L 21996940 intergenic not near genes chr2L 21996996 intergenic not near genes chr2L 21997052 intergenic not near genes chr2L_10_21995001 chr2L_21995001 S1 511 chr2L 22001651 22001675 chr2L 22001728 22001752 5 77 3.0 2.5 2.8 1.3 101 chr2L 22001651 intergenic not near genes chr2L 22001702 intergenic not near genes chr2L 22001752 intergenic not near genes chr2L_5_22000001 chr2L_22000001 S1 512 chr2L 22007932 22007949 chr2L 22008015 22008032 4 83 7.0 0.0 3.5 0.9 100 chr2L 22007932 intergenic not near genes chr2L 22007982 intergenic not near genes chr2L 22008032 intergenic not near genes chr2L_4_22005001 chr2L_22005001 S1 513 chr2L 22025825 22025848 chr2L 22025905 22025928 7 80 6.0 4.5 5.2 1.1 103 chr2L 22025825 intergenic tio + chr2L 22025876 intergenic tio + chr2L 22025928 intergenic tio + chr2L_7_22025001 chr2L_22025001 S1 514 chr2L 22047253 22047256 chr2L 22047379 22047382 4 126 3.5 7.5 5.5 0.6 129 chr2L 22047253 intergenic not near genes chr2L 22047318 intergenic not near genes chr2L 22047382 intergenic not near genes chr2L_4_22045001 chr2L_22045001 S1 515 chr2L 22212141 22212158 chr2L 22212689 22212706 4 548 1.5 1.0 1.2 1.8 565 chr2L 22212141 intron Ir40a - chr2L 22212424 intron Ir40a - chr2L 22212706 intron Ir40a - chr2L_4_22210001 chr2L_22210001 S1 516 chr2L 22215913 22215929 chr2L 22216000 22216010 6 86 4.0 4.0 4.0 1.2 97 chr2L 22215913 intergenic not near genes chr2L 22215962 intergenic not near genes chr2L 22216010 intergenic not near genes chr2L_6_22215001 chr2L_22215001 S1 517 chr2L 22239424 22239461 chr2L 22239506 22239543 8 82 3.5 5.0 4.2 1.5 119 chr2L 22239424 intron CR43765 - chr2L 22239484 3` UTR CR43765 - chr2L 22239543 3` UTR CR43765 - chr2L_8_22235001 chr2L_22235001 S1 518 chr2L 22258615 22258645 chr2L 22260740 22260770 G6 12 2125 3.5 6.5 5.0 2.0 2155 chr2L 22258615 intergenic Tif-IA + chr2L 22259692 intergenic not near genes chr2L 22260770 intergenic not near genes chr2L_12_22255001 chr2L_22255001 S1 519 chr2L 22294354 22294379 chr2L 22294443 22294468 4 89 4.0 2.0 3.0 1.0 114 chr2L 22294354 intergenic not near genes chr2L 22294411 intergenic not near genes chr2L 22294468 intergenic not near genes chr2L_4_22290001 chr2L_22290001 S1 520 chr2L 22548922 22548941 chr2L 22550148 22550167 1360 13 1226 0.0 11.5 5.8 1.9 1245 chr2L 22548922 intergenic CG17490 + chr2L 22549544 intergenic not near genes chr2L 22550167 intergenic CG17493 + chr2L_13_22545001 chr2L_22545001 S1 521 chr2L 22581969 22582002 chr2L 22583759 22583792 S-element 8 1790 3.5 5.0 4.2 1.5 1823 chr2L 22581969 intron CG17494 + chr2L 22582880 intron CG17494 + chr2L 22583792 intron CG17494 + chr2L_8_22580001 chr2L_22580001 S1 522 chr2L 22706807 22706841 chr2L 22706911 22706945 22 104 4.0 7.5 5.8 3.2 138 chr2L 22706807 intron CG40006 - chr2L 22706876 intron CG40006 - chr2L 22706945 intron CG40006 - chr2L_22_22705001 chr2L_22705001 S1 523 chr2L 22776421 22776439 chr2L 22778211 22778229 S-element 7 1790 6.0 4.0 5.0 1.2 1808 chr2L 22776421 intergenic not near genes chr2L 22777325 intergenic not near genes chr2L 22778229 intergenic not near genes chr2L_7_22775001 chr2L_22775001 S1 524 chr2L 23181397 23181426 chr2L 23181507 23181536 22 110 2.0 8.0 5.0 3.7 139 chr2L 23181397 intergenic not near genes chr2L 23181466 intergenic not near genes chr2L 23181536 intergenic not near genes chr2L_22_23180001 chr2L_23180001 S1 525 chr2L 23241844 23241849 chr2L 23241925 23241930 5 81 30.0 7.0 18.5 0.3 86 chr2L 23241844 intergenic not near genes chr2L 23241887 intergenic not near genes chr2L 23241930 intergenic not near genes chr2L_5_23240001 chr2L_23240001 S1 526 chr2R 529320 529357 chr2R 537946 537983 Max-element 19 8625 0.0 4.0 2.0 6.3 8663 chr2R 529320 intron CG40378 + chr2R 533652 intron CG40378 + chr2R 537983 intron CG40378 + chr2R_19_530001 chr2R_530001 S1 527 chr2R 1082370 1082383 chr2R 1087138 1087160 Doc 9 4776 11.0 8.0 9.5 0.9 4790 chr2R 1082370 intron rl + chr2R 1084765 intron rl + chr2R 1087160 intron rl + chr2R_9_1080001 chr2R_1080001 S1 528 chr2R 1919576 1919590 chr2R 1920051 1920065 4 475 24.0 24.0 24.0 0.2 489 chr2R 1919576 intron CG17684 - chr2R 1919820 intron CG17684 - chr2R 1920065 intron CG17684 - chr2R_4_1915001 chr2R_1915001 S1 529 chr2R 2498984 2499016 chr2R 2508132 2508164 roo 14 9148 6.5 6.0 6.2 1.9 9180 chr2R 2498984 intron MFS17 - chr2R 2503574 intron MFS17 - chr2R 2508164 intron MFS17 - chr2R_14_2500001 chr2R_2500001 S1 530 chr2R 2526967 2526974 chr2R 2527429 2527436 6 462 5.5 16.0 10.8 0.5 469 chr2R 2526967 intron MFS17 - chr2R 2527202 intron MFS17 - chr2R 2527436 intron MFS17 - chr2R_6_2525001 chr2R_2525001 S1 531 chr2R 2591548 2591558 chr2R 2594225 2594235 roo 8 2676 27.5 28.0 27.8 0.3 2687 chr2R 2591548 intergenic not near genes chr2R 2592892 intergenic not near genes chr2R 2594235 intergenic not near genes chr2R_8_2590001 chr2R_2590001 S1 532 chr2R 3144099 3144108 chr2R 3393378 3393387 Doc 7 249279 21.0 25.5 23.2 0.3 249288 chr2R 3144099 intron CG42596 + chr2R 3268743 intergenic not near genes chr2R 3393387 intergenic not near genes chr2R_7_3265001 chr2R_3265001 S1 533 chr2R 3291673 3291955 chr2R 3914842 3915125 4 623170 26.5 11.0 18.8 0.2 623452 chr2R 3291673 intergenic not near genes chr2R 3603399 intergenic not near genes chr2R 3915125 intron uex - chr2R_4_3600001 chr2R_3600001 S1 534 chr2R 3293741 3293763 chr2R 3293820 3293842 7 79 3.0 2.0 2.5 2.0 101 chr2R 3293741 intergenic not near genes chr2R 3293792 intergenic not near genes chr2R 3293842 intergenic not near genes chr2R_7_3290001 chr2R_3290001 S1 535 chr2R 3526647 3526654 chr2R 3531378 3531385 F-element 5 4731 3.5 3.5 3.5 1.1 4738 chr2R 3526647 intergenic not near genes chr2R 3529016 intergenic not near genes chr2R 3531385 intergenic not near genes chr2R_5_3525001 chr2R_3525001 S1 536 chr2R 3532623 3532641 chr2R 3536067 3536085 Doc 4 3444 2.5 2.5 2.5 1.1 3462 chr2R 3532623 intergenic not near genes chr2R 3534354 intergenic not near genes chr2R 3536085 intergenic not near genes chr2R_4_3530001 chr2R_3530001 S1 537 chr2R 4265300 4265313 chr2R 4265384 4265397 6 84 14.5 13.5 14.0 0.4 97 chr2R 4265300 intergenic not near genes chr2R 4265348 intergenic not near genes chr2R 4265397 intergenic not near genes chr2R_6_4265001 chr2R_4265001 S1 538 chr2R 4580192 4580229 chr2R 4580820 4580857 11 628 0.5 1.5 1.0 5.5 665 chr2R 4580192 intergenic not near genes chr2R 4580524 intergenic not near genes chr2R 4580857 intergenic not near genes chr2R_11_4580001 chr2R_4580001 S1 539 chr2R 4604547 4604579 chr2R 4604627 4604659 9 80 4.5 2.0 3.2 2.1 112 chr2R 4604547 intron p120ctn + chr2R 4604603 intron p120ctn + chr2R 4604659 intron p120ctn + chr2R_9_4600001 chr2R_4600001 S1 540 chr2R 4622949 4622987 chr2R 4624109 4624147 1360 12 1160 4.0 2.5 3.2 2.9 1198 chr2R 4622949 intergenic CR44101 - chr2R 4623548 intergenic not near genes chr2R 4624147 intergenic not near genes chr2R_12_4620001 chr2R_4620001 S1 541 chr2R 4656775 4656810 chr2R 4656986 4657021 19 211 47.0 42.5 44.8 0.4 246 chr2R 4656775 intergenic not near genes chr2R 4656898 intergenic not near genes chr2R 4657021 intergenic not near genes chr2R_19_4655001 chr2R_4655001 S1 542 chr2R 4688104 4688132 chr2R 4688198 4688226 10 94 3.5 2.0 2.8 2.6 122 chr2R 4688104 intergenic not near genes chr2R 4688165 intergenic not near genes chr2R 4688226 intergenic not near genes chr2R_10_4685001 chr2R_4685001 S1 543 chr2R 4750338 4750370 chr2R 4751496 4751522 1360 4 1156 1.5 1.0 1.2 1.8 1184 chr2R 4750338 intron conu + chr2R 4750930 intron conu + chr2R 4751522 intron conu + chr2R_4_4750001 chr2R_4750001 S1 544 chr2R 4819851 4819873 chr2R 4819941 4819962 7 90 2.0 4.0 3.0 1.8 111 chr2R 4819851 exon CG17528 - chr2R 4819906 exon CG17528 - chr2R 4819962 intron CG17528 - chr2R_7_4815001 chr2R_4815001 S1 545 chr2R 4940958 4940977 chr2R 4943409 4943428 9 2451 32.0 26.0 29.0 0.3 2470 chr2R 4940958 intron Ir41a + chr2R 4942193 intron Ir41a + chr2R 4943428 intron Ir41a + chr2R_9_4940001 chr2R_4940001 S1 546 chr2R 5019275 5019309 chr2R 5019361 5019396 10 87 2.0 4.0 3.0 2.5 121 chr2R 5019275 intron Ir41a + chr2R 5019336 intron Ir41a + chr2R 5019396 intron Ir41a + chr2R_10_5015001 chr2R_5015001 S1 547 chr2R 5075357 5075370 chr2R 5075774 5075787 5 417 0.0 5.0 2.5 1.4 430 chr2R 5075357 intergenic not near genes chr2R 5075572 intergenic not near genes chr2R 5075787 intergenic not near genes chr2R_5_5075001 chr2R_5075001 S1 548 chr2R 5080792 5080815 chr2R 5080884 5080907 7 92 3.0 4.0 3.5 1.6 115 chr2R 5080792 intergenic not near genes chr2R 5080850 intergenic not near genes chr2R 5080907 intergenic not near genes chr2R_7_5080001 chr2R_5080001 S1 549 chr2R 5125263 5125276 chr2R 5125586 5125599 5 323 2.0 4.0 3.0 1.2 336 chr2R 5125263 intron gus - chr2R 5125431 intron gus - chr2R 5125599 intron gus - chr2R_5_5125001 chr2R_5125001 S1 550 chr2R 5192234 5192244 chr2R 5192337 5192347 5 102 3.0 10.0 6.5 0.7 113 chr2R 5192234 intron Nipped-A - chr2R 5192290 intron Nipped-A - chr2R 5192347 intron Nipped-A - chr2R_5_5190001 chr2R_5190001 S1 551 chr2R 5209779 5209808 chr2R 5210313 5210342 8 534 4.5 2.0 3.2 1.9 563 chr2R 5209779 intron Nipped-A - chr2R 5210060 intron Nipped-A - chr2R 5210342 intron Nipped-A - chr2R_8_5210001 chr2R_5210001 S1 552 chr2R 5303486 5303519 chr2R 5303575 5303608 8 89 14.0 15.5 14.8 0.5 122 chr2R 5303486 intergenic not near genes chr2R 5303547 intergenic not near genes chr2R 5303608 intergenic not near genes chr2R_8_5300001 chr2R_5300001 S1 553 chr2R 5342827 5342854 chr2R 5342925 5342952 6 98 1.5 2.0 1.8 2.1 125 chr2R 5342827 intergenic not near genes chr2R 5342890 intergenic not near genes chr2R 5342952 intergenic not near genes chr2R_6_5340001 chr2R_5340001 S1 554 chr2R 5363485 5363519 chr2R 5363564 5363598 9 79 1.0 2.0 1.5 3.6 113 chr2R 5363485 5` UTR CR42646 + chr2R 5363542 intron CR42646 + chr2R 5363598 intron CR42646 + chr2R_9_5360001 chr2R_5360001 S1 555 chr2R 5418012 5418027 chr2R 5420634 5420660 Burdock 4 2630 3.0 3.0 3.0 1.0 2648 chr2R 5418012 intron laccase2 + chr2R 5419336 intron laccase2 + chr2R 5420660 intron laccase2 + chr2R_4_5415001 chr2R_5415001 S1 556 chr2R 5455777 5455804 chr2R 5455856 5455883 8 79 3.0 2.5 2.8 2.1 106 chr2R 5455777 3` UTR laccase2 + chr2R 5455830 3` UTR laccase2 + chr2R 5455883 3` UTR laccase2 + chr2R_8_5455001 chr2R_5455001 S1 557 chr2R 5463245 5463278 chr2R 5468691 5468724 6 5446 17.0 12.0 14.5 0.4 5479 chr2R 5463245 intergenic not near genes chr2R 5465984 intergenic not near genes chr2R 5468724 intron CG30440 - chr2R_6_5465001 chr2R_5465001 S1 558 chr2R 5472365 5472393 chr2R 5472461 5472489 15 95 2.5 4.0 3.2 3.6 124 chr2R 5472365 intron CG30440 - chr2R 5472427 intron CG30440 - chr2R 5472489 intron CG30440 - chr2R_15_5470001 chr2R_5470001 S1 559 chr2R 5491711 5491748 chr2R 5491853 5491890 7 142 1.0 1.0 1.0 3.5 179 chr2R 5491711 intron CG30440 - chr2R 5491800 intron CG30440 - chr2R 5491890 intron CG30440 - chr2R_7_5490001 chr2R_5490001 S1 560 chr2R 5603203 5603218 chr2R 5603286 5603301 6 83 2.5 3.0 2.8 1.6 98 chr2R 5603203 intergenic Fis1 - chr2R 5603252 intergenic Fis1 - chr2R 5603301 intergenic Fis1 - chr2R_6_5600001 chr2R_5600001 S1 561 chr2R 5710648 5710676 chr2R 5710726 5710754 9 78 0.5 1.0 0.8 5.0 106 chr2R 5710648 intron ap - chr2R 5710701 intron ap - chr2R 5710754 intron ap - chr2R_9_5710001 chr2R_5710001 S1 562 chr2R 5772536 5772546 chr2R 5772631 5772641 4 95 2.0 4.5 3.2 1.0 105 chr2R 5772536 3` UTR Gp210 + chr2R 5772588 3` UTR Gp210 + chr2R 5772641 3` UTR Gp210 + chr2R_4_5770001 chr2R_5770001 S1 563 chr2R 5772836 5772856 chr2R 5772919 5772939 6 83 4.0 5.0 4.5 1.1 103 chr2R 5772836 3` UTR Gp210 + chr2R 5772888 3` UTR Gp210 + chr2R 5772939 3` UTR Gp210 + chr2R_6_5770001 chr2R_5770001 S1 564 chr2R 5790470 5790493 chr2R 5790556 5790579 7 86 2.0 1.5 1.8 2.5 109 chr2R 5790470 intergenic not near genes chr2R 5790524 intergenic not near genes chr2R 5790579 intergenic not near genes chr2R_7_5790001 chr2R_5790001 S1 565 chr2R 5859975 5860012 chr2R 5860088 5860125 10 113 2.0 1.0 1.5 4.0 150 chr2R 5859975 3` UTR dpr12 + chr2R 5860050 3` UTR dpr12 + chr2R 5860125 3` UTR dpr12 + chr2R_10_5860001 chr2R_5860001 S1 566 chr2R 5868061 5868099 chr2R 5868182 5868220 14 120 3.0 4.0 3.5 3.1 159 chr2R 5868061 intergenic not near genes chr2R 5868140 intergenic not near genes chr2R 5868220 intergenic not near genes chr2R_14_5865001 chr2R_5865001 S1 567 chr2R 5869275 5869308 chr2R 5874352 5874385 flea 8 5077 2.0 3.0 2.5 2.3 5110 chr2R 5869275 intergenic not near genes chr2R 5871830 intergenic not near genes chr2R 5874385 intergenic not near genes chr2R_8_5870001 chr2R_5870001 S1 568 chr2R 5878933 5878948 chr2R 5879014 5879029 5 81 3.0 4.0 3.5 1.1 96 chr2R 5878933 intergenic CG44438 - chr2R 5878981 intergenic CG44438 - chr2R 5879029 intergenic CG44438 - chr2R_5_5875001 chr2R_5875001 S1 569 chr2R 5885230 5885377 chr2R 5885314 5885507 10 97 3.0 3.5 3.2 2.4 277 chr2R 5885230 5` UTR CR44125 + chr2R 5885368 5` UTR CR44125 + chr2R 5885507 5` UTR CR44125 + chr2R_10_5885001 chr2R_5885001 S1 570 chr2R 5902157 5902185 chr2R 5909716 5909745 17.6 4 7560 3.5 3.5 3.5 0.9 7588 chr2R 5902157 intron CG43366 + chr2R 5905951 intron CG43366 + chr2R 5909745 intron CG43366 + chr2R_4_5905001 chr2R_5905001 S1 571 chr2R 6025017 6025189 chr2R 6025134 6025398 6 164 0.0 0.0 0.0 6.0 381 chr2R 6025017 intergenic not near genes chr2R 6025208 intergenic not near genes chr2R 6025398 intergenic not near genes chr2R_6_6025001 chr2R_6025001 S1 572 chr2R 6096714 6096750 chr2R 6101913 6101948 BS 20 5193 4.0 4.5 4.2 3.8 5234 chr2R 6096714 intron EcR - chr2R 6099331 intron EcR - chr2R 6101948 intron EcR - chr2R_20_6095001 chr2R_6095001 S1 573 chr2R 6129328 6129358 chr2R 6129407 6129437 15 79 1.5 2.5 2.0 5.0 109 chr2R 6129328 intron EcR - chr2R 6129382 intron EcR - chr2R 6129437 intron EcR - chr2R_15_6125001 chr2R_6125001 S1 574 chr2R 6175592 6175628 chr2R 6175681 6175717 6 89 1.0 1.5 1.2 2.7 125 chr2R 6175592 3` UTR Cyp6w1 + chr2R 6175654 3` UTR Cyp6w1 + chr2R 6175717 3` UTR Cyp6w1 + chr2R_6_6175001 chr2R_6175001 S1 575 chr2R 6178677 6178713 chr2R 6178765 6178801 10 88 2.0 1.5 1.8 3.6 124 chr2R 6178677 intergenic not near genes chr2R 6178739 intergenic not near genes chr2R 6178801 intergenic not near genes chr2R_10_6175001 chr2R_6175001 S1 576 chr2R 6194684 6194700 chr2R 6194768 6194784 5 84 6.0 4.0 5.0 0.8 100 chr2R 6194684 intron Ptr - chr2R 6194734 intron Ptr - chr2R 6194784 intron Ptr - chr2R_5_6190001 chr2R_6190001 S1 577 chr2R 6494532 6494551 chr2R 6499295 6499314 F-element 5 4763 3.5 1.0 2.2 1.6 4782 chr2R 6494532 intergenic not near genes chr2R 6496923 intergenic not near genes chr2R 6499314 intergenic not near genes chr2R_5_6495001 chr2R_6495001 S1 578 chr2R 6579770 6579805 chr2R 6584857 6584893 flea 6 5088 1.0 0.0 0.5 4.0 5123 chr2R 6579770 intron jing + chr2R 6582332 intron jing + chr2R 6584893 intron jing + chr2R_6_6580001 chr2R_6580001 S1 579 chr2R 6691126 6691152 chr2R 6691206 6691232 5 80 3.0 4.0 3.5 1.1 106 chr2R 6691126 intron CG9422 + chr2R 6691179 intron CG9422 + chr2R 6691232 intron CG9422 + chr2R_5_6690001 chr2R_6690001 S1 580 chr2R 6696604 6696632 chr2R 6696688 6696716 10 84 7.0 6.5 6.8 1.3 112 chr2R 6696604 5` UTR Mob4 - chr2R 6696660 5` UTR Mob4 - chr2R 6696716 intergenic Rab2 +,Mob4 - chr2R_10_6695001 chr2R_6695001 S1 581 chr2R 6699591 6699617 chr2R 6699677 6699703 10 86 2.0 2.0 2.0 3.3 112 chr2R 6699591 intergenic Rab2 + chr2R 6699647 intergenic Rab2 + chr2R 6699703 intergenic Rab2 + chr2R_10_6695001 chr2R_6695001 S1 582 chr2R 6706967 6707000 chr2R 6707229 6707262 10 262 2.0 2.5 2.2 3.1 295 chr2R 6706967 intron,intron CG3409 -,CG45092 - chr2R 6707114 intron,intron CG3409 -,CG45092 - chr2R 6707262 intron,intron,3` UTR CG3409 -,CG45092 -,mir-4975 - chr2R_10_6705001 chr2R_6705001 S1 583 chr2R 6712584 6712600 chr2R 6712682 6712698 11 98 4.5 0.0 2.2 3.4 114 chr2R 6712584 intron,intron CG3409 -,CG45092 - chr2R 6712641 intron,intron CG3409 -,CG45092 - chr2R 6712698 intron,intron CG3409 -,CG45092 - chr2R_11_6710001 chr2R_6710001 S1 584 chr2R 6797079 6797111 chr2R 6797173 6797205 15 94 4.0 7.0 5.5 2.3 126 chr2R 6797079 5` UTR Epac - chr2R 6797142 5` UTR Epac - chr2R 6797205 5` UTR Epac - chr2R_15_6795001 chr2R_6795001 S1 585 chr2R 6801315 6801344 chr2R 6801393 6801422 14 78 8.0 3.5 5.8 2.1 107 chr2R 6801315 intergenic not near genes chr2R 6801368 intergenic not near genes chr2R 6801422 intergenic not near genes chr2R_14_6800001 chr2R_6800001 S1 586 chr2R 6825435 6825468 chr2R 6825529 6825562 8 94 0.5 3.0 1.8 2.9 127 chr2R 6825435 intergenic not near genes chr2R 6825498 intergenic not near genes chr2R 6825562 intergenic not near genes chr2R_8_6825001 chr2R_6825001 S1 587 chr2R 6890660 6890683 chr2R 6890748 6890778 12 94 4.5 1.5 3.0 3.0 118 chr2R 6890660 intergenic not near genes chr2R 6890719 intergenic not near genes chr2R 6890778 intergenic not near genes chr2R_12_6890001 chr2R_6890001 S1 588 chr2R 6952167 6952185 chr2R 6959748 6959766 opus 6 7581 1.5 1.5 1.5 2.4 7599 chr2R 6952167 intron,intron mim -,CheB42c - chr2R 6955966 intron,intron mim -,CheB42c - chr2R 6959766 intron,intron mim -,CheB42c - chr2R_6_6955001 chr2R_6955001 S1 589 chr2R 6961892 6961908 chr2R 6961976 6961994 7 86 3.0 3.0 3.0 1.8 102 chr2R 6961892 intron,intron mim -,CheB42c - chr2R 6961943 intron,intron mim -,CheB42c - chr2R 6961994 intron,intron mim -,CheB42c - chr2R_7_6960001 chr2R_6960001 S1 590 chr2R 7091223 7091241 chr2R 7091306 7091324 5 83 3.0 3.5 3.2 1.2 101 chr2R 7091223 intron esn + chr2R 7091274 intron esn + chr2R 7091324 intron esn + chr2R_5_7090001 chr2R_7090001 S1 591 chr2R 7171267 7171285 chr2R 7171354 7171372 7 87 2.5 8.5 5.5 1.1 105 chr2R 7171267 intron pk + chr2R 7171320 intron pk + chr2R 7171372 intron pk + chr2R_7_7170001 chr2R_7170001 S1 592 chr2R 7196567 7196586 chr2R 7201343 7201362 F-element 7 4776 7.0 2.0 4.5 1.3 4795 chr2R 7196567 intron pk + chr2R 7198964 intron pk + chr2R 7201362 intron pk + chr2R_7_7195001 chr2R_7195001 S1 593 chr2R 7209850 7209869 chr2R 7217599 7217618 roo 5 7749 3.5 4.0 3.8 1.0 7768 chr2R 7209850 intron pk + chr2R 7213734 intron pk + chr2R 7217618 intron pk + chr2R_5_7210001 chr2R_7210001 S1 594 chr2R 7235822 7235852 chr2R 7240915 7240945 jockey 16 5092 2.0 4.0 3.0 4.0 5123 chr2R 7235822 intergenic not near genes chr2R 7238384 intergenic not near genes chr2R 7240945 intergenic not near genes chr2R_16_7235001 chr2R_7235001 S1 595 chr2R 7328130 7328149 chr2R 7328242 7328261 6 112 2.0 0.5 1.2 2.7 131 chr2R 7328130 intron,intron Dscam1 -,CR45129 + chr2R 7328196 intron,intron Dscam1 -,CR45129 + chr2R 7328261 intron,intron Dscam1 -,CR45129 + chr2R_6_7325001 chr2R_7325001 S1 596 chr2R 7353383 7353414 chr2R 7353490 7353521 12 107 3.0 2.0 2.5 3.4 138 chr2R 7353383 intron Dscam1 - chr2R 7353452 intron Dscam1 - chr2R 7353521 intron Dscam1 - chr2R_12_7350001 chr2R_7350001 S1 597 chr2R 7418143 7418169 chr2R 7418223 7418249 15 80 3.0 3.0 3.0 3.8 106 chr2R 7418143 intergenic not near genes chr2R 7418196 intergenic not near genes chr2R 7418249 intergenic not near genes chr2R_15_7415001 chr2R_7415001 S1 598 chr2R 7434892 7434917 chr2R 7439194 7439219 Juan 9 4302 23.0 8.0 15.5 0.5 4327 chr2R 7434892 intergenic so + chr2R 7437056 intergenic not near genes chr2R 7439219 intergenic not near genes chr2R_9_7435001 chr2R_7435001 S1 599 chr2R 7473947 7473983 chr2R 7474025 7474061 17 78 2.0 2.5 2.2 5.3 114 chr2R 7473947 intron Aldh-III - chr2R 7474004 intron Aldh-III - chr2R 7474061 intron Aldh-III - chr2R_17_7470001 chr2R_7470001 S1 600 chr2R 7608405 7608434 chr2R 7613609 7613638 I-element 7 5204 2.5 0.0 1.2 3.2 5233 chr2R 7608405 intron CG1358 - chr2R 7611022 intron CG1358 - chr2R 7613638 intron CG1358 - chr2R_7_7610001 chr2R_7610001 S1 601 chr2R 7615130 7615139 chr2R 7615537 7615556 4 411 0.5 3.5 2.0 1.3 426 chr2R 7615130 intron CG1358 - chr2R 7615343 intron CG1358 - chr2R 7615556 intron CG1358 - chr2R_4_7615001 chr2R_7615001 S1 602 chr2R 7642866 7642886 chr2R 7642947 7642967 6 81 3.5 3.5 3.5 1.3 101 chr2R 7642866 intron CG43340 + chr2R 7642916 intron CG43340 + chr2R 7642967 intron CG43340 + chr2R_6_7640001 chr2R_7640001 S1 603 chr2R 7655451 7655484 chr2R 7655570 7655602 12 119 29.0 22.0 25.5 0.5 151 chr2R 7655451 exon CG30491 + chr2R 7655526 intron CG30491 + chr2R 7655602 exon CG30491 + chr2R_12_7655001 chr2R_7655001 S1 604 chr2R 7687143 7687177 chr2R 7687307 7687342 21 165 3.0 3.5 3.2 5.0 199 chr2R 7687143 intron CG1399 - chr2R 7687242 intron CG1399 - chr2R 7687342 intron CG1399 - chr2R_21_7685001 chr2R_7685001 S1 605 chr2R 7692010 7692030 chr2R 7692092 7692111 10 82 2.0 3.0 2.5 2.9 101 chr2R 7692010 intron CG1399 - chr2R 7692060 intron CG1399 - chr2R 7692111 intron CG1399 - chr2R_10_7690001 chr2R_7690001 S1 606 chr2R 7722987 7723010 chr2R 7724162 7724186 5 1176 11.0 8.5 9.8 0.5 1199 chr2R 7722987 intron CG18812 - chr2R 7723586 intron CG18812 - chr2R 7724186 intron CG18812 - chr2R_5_7720001 chr2R_7720001 S1 607 chr2R 7742628 7742648 chr2R 7742884 7742904 9 255 0.5 6.0 3.2 2.1 276 chr2R 7742628 intron,intron CG30497 -,CG45093 - chr2R 7742766 intron,intron CG30497 -,CG45093 - chr2R 7742904 intron,intron CG30497 -,CG45093 - chr2R_9_7740001 chr2R_7740001 S1 608 chr2R 7769736 7769761 chr2R 7769814 7769839 5 78 3.0 0.5 1.8 1.8 103 chr2R 7769736 intron,intron CG30497 -,CG45093 - chr2R 7769788 intron,intron CG30497 -,CG45093 - chr2R 7769839 intron,intron CG30497 -,CG45093 - chr2R_5_7765001 chr2R_7765001 S1 609 chr2R 7815669 7815702 chr2R 7822139 7822172 Burdock 10 6470 4.0 2.0 3.0 2.5 6503 chr2R 7815669 intergenic CG1882 + chr2R 7818920 intergenic not near genes chr2R 7822172 3` UTR cathD - chr2R_10_7815001 chr2R_7815001 S1 610 chr2R 7869188 7869214 chr2R 7873975 7874001 Doc 11 4787 6.0 3.5 4.8 1.9 4813 chr2R 7869188 intron Dgk - chr2R 7871594 intron Dgk - chr2R 7874001 intron Dgk - chr2R_11_7870001 chr2R_7870001 S1 611 chr2R 7897138 7897156 chr2R 7897228 7897246 7 90 0.0 7.5 3.8 1.5 108 chr2R 7897138 intron CG30377 + chr2R 7897192 intron CG30377 + chr2R 7897246 intron CG30377 + chr2R_7_7895001 chr2R_7895001 S1 612 chr2R 8015651 8015682 chr2R 8017675 8017706 16 2023 3.5 8.5 6.0 2.3 2055 chr2R 8015651 intergenic mir-4981 + chr2R 8016678 intergenic not near genes chr2R 8017706 intergenic not near genes chr2R_16_8015001 chr2R_8015001 S1 613 chr2R 8089268 8089288 chr2R 8089354 8089375 9 87 1.5 4.5 3.0 2.2 107 chr2R 8089268 3` UTR sut2 + chr2R 8089322 intergenic sut2 +,sut3 + chr2R 8089375 intergenic sut2 +,sut3 + chr2R_9_8085001 chr2R_8085001 S1 614 chr2R 8209604 8209629 chr2R 8209682 8209707 15 77 6.0 9.5 7.8 1.7 103 chr2R 8209604 exon LRP1 + chr2R 8209656 intron LRP1 + chr2R 8209707 intron LRP1 + chr2R_15_8205001 chr2R_8205001 S1 615 chr2R 8232568 8232578 chr2R 8232777 8232787 4 209 5.5 0.0 2.8 1.1 219 chr2R 8232568 intergenic dpn - chr2R 8232678 intergenic dpn - chr2R 8232787 intergenic dpn - chr2R_4_8230001 chr2R_8230001 S1 616 chr2R 8243402 8243434 chr2R 8243508 8243540 15 106 4.5 0.5 2.5 4.3 138 chr2R 8243402 3` UTR CR44445 - chr2R 8243471 3` UTR CR44445 - chr2R 8243540 intergenic CR44445 - chr2R_15_8240001 chr2R_8240001 S1 617 chr2R 8254048 8254074 chr2R 8254139 8254165 14 91 1.5 7.5 4.5 2.5 117 chr2R 8254048 intergenic CG14760 + chr2R 8254106 intergenic CG14760 + chr2R 8254165 intergenic CG14760 + chr2R_14_8250001 chr2R_8250001 S1 618 chr2R 8294770 8294803 chr2R 8295114 8295147 11 344 4.0 4.5 4.2 2.1 377 chr2R 8294770 intergenic not near genes chr2R 8294958 intergenic not near genes chr2R 8295147 intergenic not near genes chr2R_11_8290001 chr2R_8290001 S1 619 chr2R 8330864 8330892 chr2R 8331351 8331379 roo 17 487 5.5 4.5 5.0 2.8 515 chr2R 8330864 intron pdm3 + chr2R 8331122 intron pdm3 + chr2R 8331379 intron pdm3 + chr2R_17_8330001 chr2R_8330001 S1 620 chr2R 8334284 8334314 chr2R 8334370 8334400 10 86 3.0 1.5 2.2 3.1 116 chr2R 8334284 intron pdm3 + chr2R 8334342 intron pdm3 + chr2R 8334400 intron pdm3 + chr2R_10_8330001 chr2R_8330001 S1 621 chr2R 8338650 8338671 chr2R 8338733 8338754 5 83 2.5 7.0 4.8 0.9 104 chr2R 8338650 intron pdm3 + chr2R 8338702 intron pdm3 + chr2R 8338754 intron pdm3 + chr2R_5_8335001 chr2R_8335001 S1 622 chr2R 8368182 8368218 chr2R 8368263 8368299 16 81 3.0 3.5 3.2 3.8 117 chr2R 8368182 intron pdm3 + chr2R 8368240 intron pdm3 + chr2R 8368299 intron pdm3 + chr2R_16_8365001 chr2R_8365001 S1 623 chr2R 8379788 8379812 chr2R 8379885 8379909 9 97 3.0 3.5 3.2 2.1 121 chr2R 8379788 intron pdm3 + chr2R 8379848 intron pdm3 + chr2R 8379909 intron pdm3 + chr2R_9_8375001 chr2R_8375001 S1 624 chr2R 8398209 8398238 chr2R 8402990 8403020 Doc 7 4781 6.0 4.5 5.2 1.1 4811 chr2R 8398209 intron CG2121 - chr2R 8400614 intron CG2121 - chr2R 8403020 intron CG2121 - chr2R_7_8400001 chr2R_8400001 S1 625 chr2R 8416250 8416282 chr2R 8416334 8416366 11 84 0.5 1.0 0.8 6.1 116 chr2R 8416250 intergenic not near genes chr2R 8416308 intergenic not near genes chr2R 8416366 intergenic not near genes chr2R_11_8415001 chr2R_8415001 S1 626 chr2R 8452031 8452065 chr2R 8452115 8452149 12 84 2.5 4.0 3.2 2.9 118 chr2R 8452031 intergenic Mal-A1 - chr2R 8452090 intergenic Mal-A1 - chr2R 8452149 intergenic Mal-A1 - chr2R_12_8450001 chr2R_8450001 S1 627 chr2R 8545692 8545719 chr2R 8545776 8545803 7 84 1.0 2.5 1.8 2.5 111 chr2R 8545692 intergenic not near genes chr2R 8545748 intergenic not near genes chr2R 8545803 intergenic not near genes chr2R_7_8545001 chr2R_8545001 S1 628 chr2R 8635925 8635928 chr2R 8636004 8636007 6 79 0.0 4.5 2.2 1.9 82 chr2R 8635925 intergenic not near genes chr2R 8635966 intergenic not near genes chr2R 8636007 intergenic not near genes chr2R_6_8635001 chr2R_8635001 S1 629 chr2R 8658238 8658252 chr2R 8658314 8658329 9 76 1.0 2.5 1.8 3.2 91 chr2R 8658238 intron ptc + chr2R 8658284 intron ptc + chr2R 8658329 intron ptc + chr2R_9_8655001 chr2R_8655001 S1 630 chr2R 8714709 8714720 chr2R 8714797 8714808 5 88 0.0 6.0 3.0 1.2 99 chr2R 8714709 3` UTR PGRP-SC1b + chr2R 8714758 3` UTR PGRP-SC1b + chr2R 8714808 3` UTR PGRP-SC1b + chr2R_5_8710001 chr2R_8710001 S1 631 chr2R 8722771 8722795 chr2R 8723013 8723037 pogo 12 242 3.0 9.0 6.0 1.7 266 chr2R 8722771 intron CG14767 - chr2R 8722904 intron CG14767 - chr2R 8723037 intron CG14767 - chr2R_12_8720001 chr2R_8720001 S1 632 chr2R 8777930 8777941 chr2R 8784135 8784146 diver 5 6205 1.5 4.0 2.8 1.3 6216 chr2R 8777930 intergenic not near genes chr2R 8781038 intergenic not near genes chr2R 8784146 intergenic not near genes chr2R_5_8780001 chr2R_8780001 S1 633 chr2R 8849235 8849267 chr2R 8849314 8849346 7 79 2.5 0.5 1.5 2.8 111 chr2R 8849235 intron sns + chr2R 8849290 intron sns + chr2R 8849346 intron sns + chr2R_7_8845001 chr2R_8845001 S1 634 chr2R 8964851 8964875 chr2R 8964934 8964958 11 83 2.0 3.5 2.8 2.9 107 chr2R 8964851 intron CG8216 - chr2R 8964904 intron CG8216 - chr2R 8964958 intron CG8216 - chr2R_11_8960001 chr2R_8960001 S1 635 chr2R 8798699 8798706 chr2R 8977028 8977056 12 178331 36.0 21.5 28.8 0.4 178357 chr2R 8798699 5` UTR sns + chr2R 8887878 3` UTR RyR + chr2R 8977056 intron CG8213 - chr2R_12_8885001 chr2R_8885001 S1 636 chr2R 9052711 9052738 chr2R 9052792 9052820 6 82 0.0 3.0 1.5 2.4 109 chr2R 9052711 intron CG13743 - chr2R 9052766 intron CG13743 - chr2R 9052820 intron CG13743 - chr2R_6_9050001 chr2R_9050001 S1 637 chr2R 9063127 9063158 chr2R 9063412 9063443 14 283 2.5 4.5 3.5 3.1 316 chr2R 9063127 intron ana + chr2R 9063285 intron ana + chr2R 9063443 intron ana + chr2R_14_9060001 chr2R_9060001 S1 638 chr2R 9075906 9075934 chr2R 9076042 9076070 14 136 2.5 3.0 2.8 3.7 164 chr2R 9075906 exon ana + chr2R 9075988 intron ana + chr2R 9076070 intron ana + chr2R_14_9075001 chr2R_9075001 S1 639 chr2R 9078482 9078512 chr2R 9078561 9078591 5 79 1.5 1.0 1.2 2.3 109 chr2R 9078482 intergenic CG8083 + chr2R 9078536 intergenic CG8083 + chr2R 9078591 intergenic CG8083 + chr2R_5_9075001 chr2R_9075001 S1 640 chr2R 9151299 9151331 chr2R 9157770 9157802 Burdock 13 6471 3.0 1.5 2.2 4.1 6503 chr2R 9151299 exon CG30345 + chr2R 9154550 intergenic not near genes chr2R 9157802 intergenic CG8008 - chr2R_13_9150001 chr2R_9150001 S1 641 chr2R 9212691 9212719 chr2R 9213177 9213206 roo 11 487 7.0 7.5 7.2 1.3 515 chr2R 9212691 intergenic CR45309 + chr2R 9212948 intergenic CR45309 + chr2R 9213206 5` UTR CR45309 + chr2R_11_9210001 chr2R_9210001 S1 642 chr2R 9216276 9216279 chr2R 9216373 9216387 4 103 0.0 4.0 2.0 1.3 111 chr2R 9216276 intergenic not near genes chr2R 9216332 intergenic not near genes chr2R 9216387 intergenic not near genes chr2R_4_9215001 chr2R_9215001 S1 643 chr2R 9237218 9237241 chr2R 9237584 9237607 6 366 4.0 3.5 3.8 1.2 389 chr2R 9237218 intron hig - chr2R 9237412 intron hig - chr2R 9237607 intron,exon hig -,Cyp4p2 + chr2R_6_9235001 chr2R_9235001 S1 644 chr2R 9368126 9368154 chr2R 9368203 9368231 8 76 1.0 0.0 0.5 5.3 105 chr2R 9368126 intron CG13954 - chr2R 9368178 intron CG13954 - chr2R 9368231 intron CG13954 - chr2R_8_9365001 chr2R_9365001 S1 645 chr2R 9391059 9391083 chr2R 9391621 9391645 11 562 1.5 3.0 2.2 3.4 586 chr2R 9391059 intron l(2)03659 + chr2R 9391352 exon l(2)03659 + chr2R 9391645 exon l(2)03659 + chr2R_11_9390001 chr2R_9390001 S1 646 chr2R 9561836 9561846 chr2R 9561925 9561935 4 89 0.5 1.5 1.0 2.0 99 chr2R 9561836 3` UTR,intron CR45281 -,CG1809 + chr2R 9561886 3` UTR,intron CR45281 -,CG1809 + chr2R 9561935 3` UTR,intron CR45281 -,CG1809 + chr2R_4_9560001 chr2R_9560001 S1 647 chr2R 9590494 9590523 chr2R 9590637 9590666 7 142 1.0 1.0 1.0 3.5 172 chr2R 9590494 intron clos - chr2R 9590580 intron clos - chr2R 9590666 intron clos - chr2R_7_9590001 chr2R_9590001 S1 648 chr2R 9656239 9656271 chr2R 9657073 9657105 9 834 13.5 9.0 11.2 0.7 866 chr2R 9656239 intron Mmp2 - chr2R 9656672 intron Mmp2 - chr2R 9657105 intron Mmp2 - chr2R_9_9655001 chr2R_9655001 S1 649 chr2R 9699409 9699438 chr2R 9699495 9699526 9 88 6.5 2.0 4.2 1.7 117 chr2R 9699409 intergenic not near genes chr2R 9699468 intergenic not near genes chr2R 9699526 intergenic not near genes chr2R_9_9695001 chr2R_9695001 S1 650 chr2R 9726610 9726643 chr2R 9734162 9734195 17.6 9 7552 3.0 4.5 3.8 1.9 7585 chr2R 9726610 intron sqa - chr2R 9730402 intron sqa - chr2R 9734195 intron sqa - chr2R_9_9730001 chr2R_9730001 S1 651 chr2R 9871044 9871074 chr2R 9871531 9871561 roo 15 487 0.0 5.0 2.5 4.3 517 chr2R 9871044 intron cbx - chr2R 9871302 intron cbx - chr2R 9871561 intron,5` UTR cbx -,CG18446 + chr2R_15_9870001 chr2R_9870001 S1 652 chr2R 7071618 7071624 chr2R 9941238 9941244 6 2869620 11.5 25.0 18.2 0.3 2869626 chr2R 7071618 3` UTR CG12831 - chr2R 8506431 intron mtt - chr2R 9941244 intron Mef2 - chr2R_6_8505001 chr2R_8505001 S1 653 chr2R 9945434 9945452 chr2R 9945631 9945649 BS 6 197 5.5 4.5 5.0 1.0 215 chr2R 9945434 intron Mef2 - chr2R 9945542 intron Mef2 - chr2R 9945649 intron Mef2 - chr2R_6_9945001 chr2R_9945001 S1 654 chr2R 10005564 10005584 chr2R 10005662 10005682 9 98 4.0 2.5 3.2 2.1 118 chr2R 10005564 intron Pka-R2 - chr2R 10005623 intron Pka-R2 - chr2R 10005682 intron Pka-R2 - chr2R_9_10005001 chr2R_10005001 S1 655 chr2R 10005846 10005880 chr2R 10007012 10007046 1360 11 1166 7.5 5.5 6.5 1.5 1200 chr2R 10005846 intron Pka-R2 - chr2R 10006446 intron Pka-R2 - chr2R 10007046 intron Pka-R2 - chr2R_11_10005001 chr2R_10005001 S1 656 chr2R 10037743 10037760 chr2R 10037823 10037840 5 80 5.5 4.0 4.8 0.9 97 chr2R 10037743 exon oys - chr2R 10037792 intron oys - chr2R 10037840 intron oys - chr2R_5_10035001 chr2R_10035001 S1 657 chr2R 10047814 10047843 chr2R 10047898 10047927 4 84 1.0 3.0 2.0 1.3 113 chr2R 10047814 intron oys - chr2R 10047870 intron oys - chr2R 10047927 intron oys - chr2R_4_10045001 chr2R_10045001 S1 658 chr2R 10053521 10053548 chr2R 10053625 10053652 5 104 1.0 0.5 0.8 2.8 131 chr2R 10053521 intron magu + chr2R 10053586 intron magu + chr2R 10053652 intron magu + chr2R_5_10050001 chr2R_10050001 S1 659 chr2R 10086917 10086934 chr2R 10087015 10087032 4 98 6.0 7.5 6.8 0.5 115 chr2R 10086917 intron,exon CG2269 +,sut4 - chr2R 10086974 intron,5` UTR CG2269 +,sut4 - chr2R 10087032 intron,5` UTR CG2269 +,sut4 - chr2R_4_10085001 chr2R_10085001 S1 660 chr2R 10162609 10162642 chr2R 10162691 10162724 13 81 1.5 2.5 2.0 4.3 115 chr2R 10162609 intron KCNQ - chr2R 10162666 intron KCNQ - chr2R 10162724 intron KCNQ - chr2R_13_10160001 chr2R_10160001 S1 661 chr2R 10171111 10171142 chr2R 10171196 10171227 6 85 2.5 2.5 2.5 1.7 116 chr2R 10171111 intron KCNQ - chr2R 10171169 intron KCNQ - chr2R 10171227 intron KCNQ - chr2R_6_10170001 chr2R_10170001 S1 662 chr2R 10176875 10176904 chr2R 10186046 10186075 roo 10 9171 4.5 2.5 3.5 2.2 9200 chr2R 10176875 intron KCNQ - chr2R 10181475 intron KCNQ - chr2R 10186075 intron KCNQ - chr2R_10_10180001 chr2R_10180001 S1 663 chr2R 10203645 10203659 chr2R 10203731 10203745 6 86 3.5 2.0 2.8 1.6 100 chr2R 10203645 intergenic not near genes chr2R 10203695 intergenic not near genes chr2R 10203745 intergenic not near genes chr2R_6_10200001 chr2R_10200001 S1 664 chr2R 10216193 10216223 chr2R 10216272 10216302 9 79 2.5 2.5 2.5 2.6 109 chr2R 10216193 intron,intron CG12912 -,Hr46 - chr2R 10216248 intron,intron CG12912 -,Hr46 - chr2R 10216302 intron,intron CG12912 -,Hr46 - chr2R_9_10215001 chr2R_10215001 S1 665 chr2R 10225730 10225750 chr2R 10225813 10225833 6 83 1.5 1.5 1.5 2.4 103 chr2R 10225730 intron,intron CG12912 -,Hr46 - chr2R 10225782 intron,intron CG12912 -,Hr46 - chr2R 10225833 intron,intron CG12912 -,Hr46 - chr2R_6_10225001 chr2R_10225001 S1 666 chr2R 10266495 10266531 chr2R 10266587 10266613 12 90 2.5 4.0 3.2 2.9 118 chr2R 10266495 intron CG12910 + chr2R 10266554 intron CG12910 + chr2R 10266613 intron CG12910 + chr2R_12_10265001 chr2R_10265001 S1 667 chr2R 10318513 10318545 chr2R 10318600 10318623 9 86 1.5 2.5 2.0 3.0 110 chr2R 10318513 intron Ndg + chr2R 10318568 intron Ndg + chr2R 10318623 intron Ndg + chr2R_9_10315001 chr2R_10315001 S1 668 chr2R 10319716 10319740 chr2R 10319809 10319832 11 93 8.5 2.5 5.5 1.7 116 chr2R 10319716 intron Ndg + chr2R 10319774 intron Ndg + chr2R 10319832 intron Ndg + chr2R_11_10315001 chr2R_10315001 S1 669 chr2R 10352672 10352703 chr2R 10352750 10352781 5 78 1.5 2.5 2.0 1.7 109 chr2R 10352672 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352726 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352781 intron,exon,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R_5_10350001 chr2R_10350001 S1 670 chr2R 10387980 10387999 chr2R 10388078 10388097 7 98 0.0 4.5 2.2 2.2 117 chr2R 10387980 intron CG42732 - chr2R 10388038 intron CG42732 - chr2R 10388097 intron CG42732 - chr2R_7_10385001 chr2R_10385001 S1 671 chr2R 10454096 10454129 chr2R 10454174 10454207 13 77 1.0 2.5 1.8 4.6 111 chr2R 10454096 intron,intron Galphao +,Cyp49a1 - chr2R 10454152 intron,intron Galphao +,Cyp49a1 - chr2R 10454207 intron,intron Galphao +,Cyp49a1 - chr2R_13_10450001 chr2R_10450001 S1 672 chr2R 10484203 10484232 chr2R 10532043 10532072 15 47840 16.5 23.0 19.8 0.7 47869 chr2R 10484203 exon,exon pre-lola-G -,lola - chr2R 10508138 intron lola - chr2R 10532072 exon lola - chr2R_15_10505001 chr2R_10505001 S1 673 chr2R 10532069 10532100 chr2R 10532873 10533127 6 990 24.0 20.0 22.0 0.3 1058 chr2R 10532069 exon lola - chr2R 10532598 exon lola - chr2R 10533127 exon lola - chr2R_6_10530001 chr2R_10530001 S1 674 chr2R 10533460 10533490 chr2R 10533578 10533608 7 118 26.0 28.0 27.0 0.2 148 chr2R 10533460 exon lola - chr2R 10533534 intron lola - chr2R 10533608 exon lola - chr2R_7_10530001 chr2R_10530001 S1 675 chr2R 10571614 10571619 chr2R 10571698 10571702 4 84 0.0 0.0 0.0 4.0 88 chr2R 10571614 intron psq + chr2R 10571658 intron psq + chr2R 10571702 intron psq + chr2R_4_10570001 chr2R_10570001 S1 676 chr2R 10580708 10580714 chr2R 10580794 10580800 4 86 0.0 4.5 2.2 1.2 92 chr2R 10580708 intron psq + chr2R 10580754 intron psq + chr2R 10580800 intron psq + chr2R_4_10580001 chr2R_10580001 S1 677 chr2R 10585576 10585591 chr2R 10594160 10594175 Tirant 5 8584 1.5 3.5 2.5 1.4 8599 chr2R 10585576 intron psq + chr2R 10589876 intron psq + chr2R 10594175 intron psq + chr2R_5_10585001 chr2R_10585001 S1 678 chr2R 10644065 10644087 chr2R 10644144 10644166 12 79 6.0 1.0 3.5 2.7 101 chr2R 10644065 intron Git - chr2R 10644116 intron Git - chr2R 10644166 intron Git - chr2R_12_10640001 chr2R_10640001 S1 679 chr2R 10678491 10678517 chr2R 10678592 10678624 5 104 3.5 1.5 2.5 1.4 133 chr2R 10678491 intron stan + chr2R 10678558 intron stan + chr2R 10678624 intron stan + chr2R_5_10675001 chr2R_10675001 S1 680 chr2R 10691107 10691125 chr2R 10691188 10691206 6 81 2.0 2.0 2.0 2.0 99 chr2R 10691107 intron stan + chr2R 10691156 intron stan + chr2R 10691206 intron stan + chr2R_6_10690001 chr2R_10690001 S1 681 chr2R 10720286 10720321 chr2R 10720363 10720398 14 77 3.0 2.5 2.8 3.7 112 chr2R 10720286 3` UTR stan + chr2R 10720342 3` UTR stan + chr2R 10720398 3` UTR stan + chr2R_14_10720001 chr2R_10720001 S1 682 chr2R 10782754 10782764 chr2R 10782837 10782847 6 83 9.0 4.5 6.8 0.8 93 chr2R 10782754 intron CG33144 - chr2R 10782800 intron CG33144 - chr2R 10782847 intron CG33144 - chr2R_6_10780001 chr2R_10780001 S1 683 chr2R 10782766 10782786 chr2R 10782833 10782835 5 73 5.5 3.5 4.5 0.9 69 chr2R 10782766 intron CG33144 - chr2R 10782800 intron CG33144 - chr2R 10782835 intron CG33144 - chr2R_5_10780001 chr2R_10780001 S1 684 chr2R 10790141 10790176 chr2R 10790230 10790265 12 89 3.5 3.5 3.5 2.7 124 chr2R 10790141 intron CG33144 - chr2R 10790203 intron CG33144 - chr2R 10790265 intron CG33144 - chr2R_12_10790001 chr2R_10790001 S1 685 chr2R 10794910 10794943 chr2R 10794989 10795022 8 79 2.5 2.0 2.2 2.5 112 chr2R 10794910 intron CG33144 - chr2R 10794966 intron CG33144 - chr2R 10795022 intron CG33144 - chr2R_8_10790001 chr2R_10790001 S1 686 chr2R 10924553 10924566 chr2R 10924631 10924644 8 78 0.0 5.5 2.8 2.1 91 chr2R 10924553 intergenic not near genes chr2R 10924598 intergenic not near genes chr2R 10924644 intergenic not near genes chr2R_8_10920001 chr2R_10920001 S1 687 chr2R 10948025 10948062 chr2R 10955576 10955614 17.6 14 7552 3.0 3.0 3.0 3.5 7589 chr2R 10948025 intergenic not near genes chr2R 10951820 intergenic not near genes chr2R 10955614 intergenic not near genes chr2R_14_10950001 chr2R_10950001 S1 688 chr2R 10959094 10959112 chr2R 10959174 10959192 4 80 1.0 1.0 1.0 2.0 98 chr2R 10959094 intergenic not near genes chr2R 10959143 intergenic not near genes chr2R 10959192 intergenic not near genes chr2R_4_10955001 chr2R_10955001 S1 689 chr2R 11009827 11009846 chr2R 11018987 11019021 roo 4 9171 4.0 1.5 2.8 1.1 9194 chr2R 11009827 intron luna - chr2R 11014424 intron luna - chr2R 11019021 intron luna - chr2R_4_11010001 chr2R_11010001 S1 690 chr2R 11019888 11019906 chr2R 11024955 11024973 jockey 7 5065 3.5 6.0 4.8 1.2 5085 chr2R 11019888 intron luna - chr2R 11022430 intron luna - chr2R 11024973 intron luna - chr2R_7_11020001 chr2R_11020001 S1 691 chr2R 11134109 11134134 chr2R 11134351 11134376 pogo 8 242 1.0 1.5 1.2 3.6 267 chr2R 11134109 intergenic not near genes chr2R 11134242 intergenic not near genes chr2R 11134376 intergenic not near genes chr2R_8_11130001 chr2R_11130001 S1 692 chr2R 11207813 11207844 chr2R 11208006 11208037 BS 14 193 3.5 1.5 2.5 4.0 224 chr2R 11207813 intron shn + chr2R 11207925 intron shn + chr2R 11208037 intron shn + chr2R_14_11205001 chr2R_11205001 S1 693 chr2R 11253230 11253263 chr2R 11253307 11253340 20 77 8.5 5.5 7.0 2.5 110 chr2R 11253230 intron Cpr47Ea - chr2R 11253285 intron Cpr47Ea - chr2R 11253340 intron Cpr47Ea - chr2R_20_11250001 chr2R_11250001 S1 694 chr2R 11262194 11262220 chr2R 11262282 11262309 13 88 6.5 3.5 5.0 2.2 115 chr2R 11262194 intergenic Cpr47Ed - chr2R 11262252 intergenic Cpr47Ed - chr2R 11262309 intergenic not near genes chr2R_13_11260001 chr2R_11260001 S1 695 chr2R 11276806 11276813 chr2R 11276975 11276982 4 169 2.0 4.5 3.2 1.0 176 chr2R 11276806 intergenic not near genes chr2R 11276894 intergenic not near genes chr2R 11276982 intergenic not near genes chr2R_4_11275001 chr2R_11275001 S1 696 chr2R 11297643 11297651 chr2R 11301964 11301973 flea 9 4322 4.0 1.0 2.5 2.6 4330 chr2R 11297643 intergenic CG42336 - chr2R 11299808 intergenic not near genes chr2R 11301973 5` UTR CG7741 + chr2R_9_11295001 chr2R_11295001 S1 697 chr2R 11344145 11344181 chr2R 11344242 11344274 5 95 0.0 3.5 1.8 1.8 129 chr2R 11344145 intergenic alphaTry - chr2R 11344210 intergenic alphaTry - chr2R 11344274 3` UTR alphaTry - chr2R_5_11340001 chr2R_11340001 S1 698 chr2R 11415517 11415532 chr2R 11418667 11418682 opus 5 3150 6.0 4.5 5.2 0.8 3165 chr2R 11415517 intron Drip - chr2R 11417100 intron Drip - chr2R 11418682 intron Drip - chr2R_5_11415001 chr2R_11415001 S1 699 chr2R 11472651 11472666 chr2R 11473849 11473864 pogo 8 1198 6.0 3.5 4.8 1.4 1213 chr2R 11472651 intergenic not near genes chr2R 11473258 intergenic not near genes chr2R 11473864 intergenic not near genes chr2R_8_11470001 chr2R_11470001 S1 700 chr2R 11480815 11480830 chr2R 11480899 11480914 4 84 0.5 2.0 1.2 1.8 99 chr2R 11480815 intron inv + chr2R 11480864 intron inv + chr2R 11480914 intron inv + chr2R_4_11480001 chr2R_11480001 S1 701 chr2R 12707521 12707537 chr2R 12715888 12715901 roo 6 8366 4.5 2.0 3.2 1.4 8380 chr2R 12707521 intron CG42663 + chr2R 12711711 intron CG42663 + chr2R 12715901 intron CG42663 + chr2R_6_12710001 chr2R_12710001 S1 702 chr2R 12789311 12789325 chr2R 12797658 12797687 roo 5 8359 1.5 3.5 2.5 1.4 8376 chr2R 12789311 intron,3` UTR sca +,CR45137 - chr2R 12793499 intron,intron sca +,CR45137 - chr2R 12797687 intron,3` UTR sca +,CR45137 - chr2R_5_12790001 chr2R_12790001 S1 703 chr2R 12988265 12988428 chr2R 12988378 12988533 13 107 0.0 0.0 0.0 13.0 268 chr2R 12988265 intergenic not near genes chr2R 12988399 intergenic not near genes chr2R 12988533 intergenic not near genes chr2R_13_12985001 chr2R_12985001 S1 704 chr2R 13089091 13089094 chr2R 13089226 13089229 4 135 5.0 7.5 6.2 0.6 138 chr2R 13089091 intergenic not near genes chr2R 13089160 intergenic not near genes chr2R 13089229 intergenic not near genes chr2R_4_13085001 chr2R_13085001 S1 705 chr2R 13089095 13089109 chr2R 13089219 13089231 6 130 3.0 5.5 4.2 1.2 136 chr2R 13089095 intergenic not near genes chr2R 13089163 intergenic not near genes chr2R 13089231 intergenic not near genes chr2R_6_13085001 chr2R_13085001 S1 706 chr2R 13136840 13136867 chr2R 13141639 13141666 Doc 12 4799 5.5 6.5 6.0 1.7 4826 chr2R 13136840 exon Cap-G + chr2R 13139253 intron Cap-G + chr2R 13141666 intron Cap-G + chr2R_12_13135001 chr2R_13135001 S1 707 chr2R 13194848 13194854 chr2R 13194946 13194952 5 98 10.5 14.5 12.5 0.4 104 chr2R 13194848 intergenic not near genes chr2R 13194900 intergenic not near genes chr2R 13194952 intergenic not near genes chr2R_5_13190001 chr2R_13190001 S1 708 chr2R 13220537 13220551 chr2R 13220637 13220651 5 100 0.0 5.0 2.5 1.4 114 chr2R 13220537 intron CG17059 + chr2R 13220594 intron CG17059 + chr2R 13220651 intron CG17059 + chr2R_5_13220001 chr2R_13220001 S1 709 chr2R 13309664 13309683 chr2R 13309783 13309802 6 119 2.0 0.0 1.0 3.0 138 chr2R 13309664 intergenic not near genes chr2R 13309733 intergenic not near genes chr2R 13309802 intergenic not near genes chr2R_6_13305001 chr2R_13305001 S1 710 chr2R 14135495 14135523 chr2R 14135778 14135807 14 283 5.5 3.5 4.5 2.5 312 chr2R 14135495 intron Prosap - chr2R 14135651 intron Prosap - chr2R 14135807 intron Prosap - chr2R_14_14135001 chr2R_14135001 S1 711 chr2R 14142445 14142472 chr2R 14142536 14142563 7 90 2.5 1.5 2.0 2.3 118 chr2R 14142445 intergenic not near genes chr2R 14142504 intergenic not near genes chr2R 14142563 intergenic not near genes chr2R_7_14140001 chr2R_14140001 S1 712 chr2R 14277592 14277608 chr2R 14277664 14277691 4 80 1.5 3.5 2.5 1.1 99 chr2R 14277592 5` UTR Ih + chr2R 14277642 5` UTR Ih + chr2R 14277691 5` UTR Ih + chr2R_4_14275001 chr2R_14275001 S1 713 chr2R 14290295 14290325 chr2R 14290388 14290417 6 90 3.5 3.0 3.2 1.4 122 chr2R 14290295 intron Ih + chr2R 14290356 intron Ih + chr2R 14290417 intron Ih + chr2R_6_14290001 chr2R_14290001 S1 714 chr2R 14467305 14467325 chr2R 14476464 14476484 roo 12 9159 3.0 2.0 2.5 3.4 9179 chr2R 14467305 intergenic not near genes chr2R 14471894 intergenic not near genes chr2R 14476484 5` UTR CR44462 + chr2R_12_14470001 chr2R_14470001 S1 715 chr2R 14610244 14610275 chr2R 14610337 14610368 9 92 3.0 2.0 2.5 2.6 124 chr2R 14610244 exon Su(var)2-HP2 - chr2R 14610306 exon Su(var)2-HP2 - chr2R 14610368 exon Su(var)2-HP2 - chr2R_9_14610001 chr2R_14610001 S1 716 chr2R 14748860 14748877 chr2R 14748960 14748977 6 100 4.5 0.0 2.2 1.9 117 chr2R 14748860 intergenic AttB + chr2R 14748918 intergenic AttB + chr2R 14748977 intergenic AttB + chr2R_6_14745001 chr2R_14745001 S1 717 chr2R 14796344 14796361 chr2R 14796442 14796459 4 98 4.0 3.0 3.5 0.9 115 chr2R 14796344 intron kn - chr2R 14796402 intron kn - chr2R 14796459 intron kn - chr2R_4_14795001 chr2R_14795001 S1 718 chr2R 14855032 14855063 chr2R 14855125 14855156 10 93 5.0 1.5 3.2 2.4 124 chr2R 14855032 5` UTR Ciao1 - chr2R 14855094 intergenic Ciao1 -,HPS1 + chr2R 14855156 intergenic Ciao1 -,HPS1 + chr2R_10_14855001 chr2R_14855001 S1 719 chr2R 14889210 14889233 chr2R 14897819 14897842 Max-element 6 8609 3.0 0.5 1.8 2.1 8632 chr2R 14889210 intergenic Cyp6a8 - chr2R 14893526 intergenic not near genes chr2R 14897842 intergenic not near genes chr2R_6_14890001 chr2R_14890001 S1 720 chr2R 14911699 14911727 chr2R 14911823 14911851 11 124 2.0 2.0 2.0 3.7 152 chr2R 14911699 intron CG10249 - chr2R 14911775 intron CG10249 - chr2R 14911851 intron CG10249 - chr2R_11_14910001 chr2R_14910001 S1 721 chr2R 14917849 14917883 chr2R 14917935 14917969 10 85 4.5 4.5 4.5 1.8 120 chr2R 14917849 intron CG10249 - chr2R 14917909 intron CG10249 - chr2R 14917969 intron CG10249 - chr2R_10_14915001 chr2R_14915001 S1 722 chr2R 14922150 14922174 chr2R 14922227 14922251 5 77 1.5 4.0 2.8 1.3 101 chr2R 14922150 intron CG10249 - chr2R 14922200 intron CG10249 - chr2R 14922251 intron CG10249 - chr2R_5_14920001 chr2R_14920001 S1 723 chr2R 14934453 14934470 chr2R 14934542 14934559 6 89 2.5 0.0 1.2 2.7 106 chr2R 14934453 intron CG10253 - chr2R 14934506 intron CG10253 - chr2R 14934559 intron CG10253 - chr2R_6_14930001 chr2R_14930001 S1 724 chr2R 14987380 14987414 chr2R 14987525 14987559 9 145 2.0 2.5 2.2 2.8 179 chr2R 14987380 intron pcs + chr2R 14987470 intron pcs + chr2R 14987559 intron pcs + chr2R_9_14985001 chr2R_14985001 S1 725 chr2R 15004722 15004752 chr2R 15005052 15005082 jockey 8 330 3.5 3.0 3.2 1.9 360 chr2R 15004722 intergenic not near genes chr2R 15004902 intergenic not near genes chr2R 15005082 intergenic not near genes chr2R_8_15000001 chr2R_15000001 S1 726 chr2R 15012808 15012839 chr2R 15012895 15012926 12 87 1.5 3.0 2.2 3.8 118 chr2R 15012808 intron hbs + chr2R 15012867 intron hbs + chr2R 15012926 intron hbs + chr2R_12_15010001 chr2R_15010001 S1 727 chr2R 15054734 15054766 chr2R 15054812 15054844 19 77 8.5 10.0 9.2 1.9 110 chr2R 15054734 intergenic not near genes chr2R 15054789 intergenic not near genes chr2R 15054844 intergenic not near genes chr2R_19_15050001 chr2R_15050001 S1 728 chr2R 15084978 15085001 chr2R 15092028 15092051 297 12 7050 5.5 3.0 4.2 2.3 7073 chr2R 15084978 intergenic not near genes chr2R 15088514 intergenic not near genes chr2R 15092051 5` UTR CR44457 + chr2R_12_15085001 chr2R_15085001 S1 729 chr2R 15092409 15092435 chr2R 15092500 15092526 10 91 3.5 2.0 2.8 2.6 117 chr2R 15092409 5` UTR CR44457 + chr2R 15092468 intergenic CR44457 + chr2R 15092526 intergenic CR44457 + chr2R_10_15090001 chr2R_15090001 S1 730 chr2R 15119318 15119351 chr2R 15127800 15127833 Tirant 15 8482 6.0 7.5 6.8 1.9 8515 chr2R 15119318 intron chn + chr2R 15123576 intron chn + chr2R 15127833 intron chn + chr2R_15_15120001 chr2R_15120001 S1 731 chr2R 15168272 15168300 chr2R 15168366 15168394 14 94 1.5 5.5 3.5 3.1 122 chr2R 15168272 intron igl + chr2R 15168333 intron igl + chr2R 15168394 intron igl + chr2R_14_15165001 chr2R_15165001 S1 732 chr2R 15196090 15196127 chr2R 15196187 15196224 15 97 3.5 3.5 3.5 3.3 134 chr2R 15196090 intergenic not near genes chr2R 15196157 intergenic not near genes chr2R 15196224 intergenic not near genes chr2R_15_15195001 chr2R_15195001 S1 733 chr2R 15230386 15230392 chr2R 15231096 15231102 7 710 16.5 0.0 8.2 0.8 716 chr2R 15230386 intron,5` UTR Fs -,CR44370 + chr2R 15230744 intron,5` UTR Fs -,CR44370 + chr2R 15231102 intron,5` UTR Fs -,CR44370 + chr2R_7_15230001 chr2R_15230001 S1 734 chr2R 15295859 15295890 chr2R 15296007 15296038 13 148 3.5 2.5 3.0 3.2 179 chr2R 15295859 intron Trpm - chr2R 15295948 intron Trpm - chr2R 15296038 intron Trpm - chr2R_13_15295001 chr2R_15295001 S1 735 chr2R 15296161 15296167 chr2R 15296245 15296251 6 84 3.0 4.0 3.5 1.3 90 chr2R 15296161 intron Trpm - chr2R 15296206 intron Trpm - chr2R 15296251 intron Trpm - chr2R_6_15295001 chr2R_15295001 S1 736 chr2R 15375355 15375362 chr2R 15376171 15376180 4 818 0.0 4.0 2.0 1.3 825 chr2R 15375355 intergenic not near genes chr2R 15375768 intergenic not near genes chr2R 15376180 intergenic dup - chr2R_4_15375001 chr2R_15375001 S1 737 chr2R 15404117 15404131 chr2R 15404216 15404230 4 97 3.5 1.0 2.2 1.2 113 chr2R 15404117 intron CG43729 + chr2R 15404174 intron CG43729 + chr2R 15404230 intron CG43729 + chr2R_4_15400001 chr2R_15400001 S1 738 chr2R 15471566 15471586 chr2R 15471720 15471741 11 154 34.0 26.5 30.2 0.4 175 chr2R 15471566 3` UTR CG43729 + chr2R 15471654 3` UTR CG43729 + chr2R 15471741 3` UTR CG43729 + chr2R_11_15470001 chr2R_15470001 S1 739 chr2R 15845173 15845184 chr2R 15845253 15845264 5 80 0.0 7.5 3.8 1.0 91 chr2R 15845173 intron,intron tun +,CG8249 - chr2R 15845218 intron,intron tun +,CG8249 - chr2R 15845264 intron,intron tun +,CG8249 - chr2R_5_15845001 chr2R_15845001 S1 740 chr2R 15898876 15898906 chr2R 15898975 15899005 12 99 3.0 3.0 3.0 3.0 129 chr2R 15898876 intron sli - chr2R 15898940 intron sli - chr2R 15899005 intron sli - chr2R_12_15895001 chr2R_15895001 S1 741 chr2R 15951835 15951866 chr2R 15951912 15951942 18 77 1.0 7.0 4.0 3.6 107 chr2R 15951835 intron Strn-Mlck - chr2R 15951888 intron Strn-Mlck - chr2R 15951942 intron Strn-Mlck - chr2R_18_15950001 chr2R_15950001 S1 742 chr2R 16054954 16054962 chr2R 16055037 16055046 9 84 12.0 11.5 11.8 0.7 92 chr2R 16054954 intron CG8405 + chr2R 16055000 intron CG8405 + chr2R 16055046 intron CG8405 + chr2R_9_16050001 chr2R_16050001 S1 743 chr2R 16380118 16380151 chr2R 16380217 16380250 10 99 3.5 0.5 2.0 3.3 132 chr2R 16380118 5` UTR,3` UTR CR45316 +,CR45317 - chr2R 16380184 3` UTR CR45317 - chr2R 16380250 intergenic CR45317 -,CR45316 +,CG43187 + chr2R_10_16380001 chr2R_16380001 S1 744 chr2R 16539636 16539667 chr2R 16544846 16544877 copia 8 5210 3.0 1.5 2.2 2.5 5241 chr2R 16539636 intergenic not near genes chr2R 16542256 intergenic not near genes chr2R 16544877 intergenic not near genes chr2R_8_16540001 chr2R_16540001 S1 745 chr2R 16554111 16554137 chr2R 16554464 16554490 11 352 4.5 1.0 2.8 2.9 379 chr2R 16554111 intron Syn2 + chr2R 16554300 intron Syn2 + chr2R 16554490 intron Syn2 + chr2R_11_16550001 chr2R_16550001 S1 746 chr2R 16586876 16586907 chr2R 16586955 16586985 8 79 2.5 2.5 2.5 2.3 109 chr2R 16586876 intergenic RpLP2 +,CG8311 - chr2R 16586930 intergenic CG8311 -,RpLP2 + chr2R 16586985 intergenic CG8311 -,RpLP2 + chr2R_8_16585001 chr2R_16585001 S1 747 chr2R 16593569 16593595 chr2R 16593765 16593791 8 196 2.5 3.0 2.8 2.1 222 chr2R 16593569 intron CG8306 - chr2R 16593680 intron CG8306 - chr2R 16593791 intron CG8306 - chr2R_8_16590001 chr2R_16590001 S1 748 chr2R 16689151 16689163 chr2R 16689481 16689493 9 330 8.0 1.5 4.8 1.6 342 chr2R 16689151 intron CG30463 - chr2R 16689322 intron CG30463 - chr2R 16689493 intron CG30463 - chr2R_9_16685001 chr2R_16685001 S1 749 chr2R 16732621 16732653 chr2R 16732709 16732741 10 88 1.5 1.5 1.5 4.0 120 chr2R 16732621 5` UTR CG30463 - chr2R 16732681 5` UTR CG30463 - chr2R 16732741 5` UTR CG30463 - chr2R_10_16730001 chr2R_16730001 S1 750 chr2R 16737143 16737163 chr2R 16737244 16737264 10 101 7.0 5.5 6.2 1.4 121 chr2R 16737143 3` UTR CG43104 - chr2R 16737204 3` UTR CG43104 - chr2R 16737264 exon CG43104 - chr2R_10_16735001 chr2R_16735001 S1 751 chr2R 16782308 16782326 chr2R 16782407 16782425 13 99 15.0 12.0 13.5 0.9 117 chr2R 16782308 exon resilin + chr2R 16782366 exon resilin + chr2R 16782425 exon resilin + chr2R_13_16780001 chr2R_16780001 S1 752 chr2R 16782328 16782532 chr2R 16782406 16782423 4 114 10.5 12.0 11.2 0.3 95 chr2R 16782328 exon resilin + chr2R 16782376 exon resilin + chr2R 16782423 exon resilin + chr2R_4_16780001 chr2R_16780001 S1 753 chr2R 16787475 16787492 chr2R 16787558 16787575 9 83 4.5 0.0 2.2 2.8 100 chr2R 16787475 intron CG5522 + chr2R 16787525 intron CG5522 + chr2R 16787575 intron CG5522 + chr2R_9_16785001 chr2R_16785001 S1 754 chr2R 17101066 17101083 chr2R 17101227 17101244 5 161 0.5 2.0 1.2 2.3 178 chr2R 17101066 intron CG30456 + chr2R 17101155 intron CG30456 + chr2R 17101244 intron CG30456 + chr2R_5_17100001 chr2R_17100001 S1 755 chr2R 17102715 17102726 chr2R 17102797 17102808 5 82 0.0 7.0 3.5 1.1 93 chr2R 17102715 5` UTR CG30456 + chr2R 17102762 5` UTR CG30456 + chr2R 17102808 5` UTR CG30456 + chr2R_5_17100001 chr2R_17100001 S1 756 chr2R 17147238 17147264 chr2R 17152270 17152296 jockey 11 5032 1.5 5.5 3.5 2.4 5058 chr2R 17147238 intergenic not near genes chr2R 17149767 intergenic not near genes chr2R 17152296 intergenic not near genes chr2R_11_17145001 chr2R_17145001 S1 757 chr2R 17161353 17161364 chr2R 17161561 17161572 5 208 5.0 0.0 2.5 1.4 219 chr2R 17161353 intergenic not near genes chr2R 17161462 intergenic not near genes chr2R 17161572 intergenic not near genes chr2R_5_17160001 chr2R_17160001 S1 758 chr2R 17226435 17226466 chr2R 17226780 17226811 11 345 2.0 3.0 2.5 3.1 376 chr2R 17226435 intron mbl + chr2R 17226623 intron mbl + chr2R 17226811 intron mbl + chr2R_11_17225001 chr2R_17225001 S1 759 chr2R 17236506 17236537 chr2R 17241711 17241742 copia 8 5203 2.0 3.0 2.5 2.3 5236 chr2R 17236506 intron mbl + chr2R 17239124 intron mbl + chr2R 17241742 intron mbl + chr2R_8_17235001 chr2R_17235001 S1 760 chr2R 17250690 17250725 chr2R 17250775 17250810 9 85 1.0 3.0 2.0 3.0 120 chr2R 17250690 intron mbl + chr2R 17250750 intron mbl + chr2R 17250810 intron mbl + chr2R_9_17250001 chr2R_17250001 S1 761 chr2R 17339599 17339602 chr2R 17339692 17339696 4 94 0.0 8.0 4.0 0.8 97 chr2R 17339599 intron mbl + chr2R 17339648 intron mbl + chr2R 17339696 intron mbl + chr2R_4_17335001 chr2R_17335001 S1 762 chr2R 17389268 17389304 chr2R 17389360 17389396 16 92 3.0 4.0 3.5 3.6 128 chr2R 17389268 intergenic CR44344 - chr2R 17389332 intergenic CR44344 - chr2R 17389396 intergenic CR44344 - chr2R_16_17385001 chr2R_17385001 S1 763 chr2R 17470335 17470355 chr2R 17470420 17470440 7 85 0.0 3.5 1.8 2.5 105 chr2R 17470335 intron qkr54B + chr2R 17470388 intron qkr54B + chr2R 17470440 intron qkr54B + chr2R_7_17470001 chr2R_17470001 S1 764 chr2R 17485924 17485929 chr2R 17490695 17490700 F-element 6 4771 6.0 1.5 3.8 1.2 4776 chr2R 17485924 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17488312 intron NT5E-2 + chr2R 17490700 intron NT5E-2 + chr2R_6_17485001 chr2R_17485001 S1 765 chr2R 17627752 17627785 chr2R 17628080 17628113 9 328 3.0 5.5 4.2 1.7 361 chr2R 17627752 intron CG10936 - chr2R 17627932 intron CG10936 - chr2R 17628113 intron CG10936 - chr2R_9_17625001 chr2R_17625001 S1 766 chr2R 17655200 17655234 chr2R 17655278 17655312 11 77 2.5 3.0 2.8 2.9 112 chr2R 17655200 intron CCHa1-R - chr2R 17655256 intron CCHa1-R - chr2R 17655312 intron CCHa1-R - chr2R_11_17655001 chr2R_17655001 S1 767 chr2R 17703204 17703239 chr2R 17703285 17703320 7 81 3.5 2.5 3.0 1.8 116 chr2R 17703204 intron Uhg1 + chr2R 17703262 5` UTR Uhg1 + chr2R 17703320 5` UTR Uhg1 + chr2R_7_17700001 chr2R_17700001 S1 768 chr2R 17709694 17709982 chr2R 17709780 17710074 5 89 3.0 5.0 4.0 1.0 380 chr2R 17709694 intron CG6424 - chr2R 17709884 intron CG6424 - chr2R 17710074 intron CG6424 - chr2R_5_17705001 chr2R_17705001 S1 769 chr2R 17709992 17710014 chr2R 17710084 17710106 4 92 1.0 1.5 1.2 1.8 114 chr2R 17709992 intron CG6424 - chr2R 17710049 intron CG6424 - chr2R 17710106 intron CG6424 - chr2R_4_17710001 chr2R_17710001 S1 770 chr2R 17782360 17782387 chr2R 17783564 17783591 pogo 7 1204 3.5 1.0 2.2 2.2 1231 chr2R 17782360 intergenic CG33981 -,fab1 - chr2R 17782976 intergenic not near genes chr2R 17783591 intergenic mir-31a - chr2R_7_17780001 chr2R_17780001 S1 771 chr2R 17784028 17784055 chr2R 17784268 17784297 pogo 12 239 5.0 12.0 8.5 1.3 269 chr2R 17784028 intergenic mir-31a - chr2R 17784162 intergenic mir-31a - chr2R 17784297 intergenic mir-31a - chr2R_12_17780001 chr2R_17780001 S1 772 chr2R 17860191 17860195 chr2R 17860274 17860278 4 83 0.0 3.0 1.5 1.6 87 chr2R 17860191 3` UTR olf186-F + chr2R 17860234 3` UTR olf186-F + chr2R 17860278 3` UTR olf186-F + chr2R_4_17860001 chr2R_17860001 S1 773 chr2R 17918163 17918192 chr2R 17918241 17918270 9 78 3.0 4.0 3.5 2.0 107 chr2R 17918163 intron Elk + chr2R 17918216 intron Elk + chr2R 17918270 intron Elk + chr2R_9_17915001 chr2R_17915001 S1 774 chr2R 18033633 18033644 chr2R 18033764 18033771 6 130 2.5 0.5 1.5 2.4 138 chr2R 18033633 intergenic not near genes chr2R 18033702 intergenic not near genes chr2R 18033771 intergenic not near genes chr2R_6_18030001 chr2R_18030001 S1 775 chr2R 18045677 18045705 chr2R 18046030 18046058 jockey 5 353 1.5 0.5 1.0 2.5 381 chr2R 18045677 intergenic not near genes chr2R 18045868 intergenic not near genes chr2R 18046058 intergenic CG5767 - chr2R_5_18045001 chr2R_18045001 S1 776 chr2R 18142916 18142921 chr2R 18143156 18143161 5 240 24.5 17.5 21.0 0.2 245 chr2R 18142916 intron,5` UTR pAbp +,snoRNA:Psi18S-1347a + chr2R 18143038 intron,5` UTR pAbp +,snoRNA:Psi18S-1347b + chr2R 18143161 intron pAbp + chr2R_5_18140001 chr2R_18140001 S1 777 chr2R 18144843 18144872 chr2R 18144966 18144995 9 121 33.5 30.0 31.8 0.3 152 chr2R 18144843 exon pAbp + chr2R 18144919 intron pAbp + chr2R 18144995 exon pAbp + chr2R_9_18140001 chr2R_18140001 S1 778 chr2R 18219633 18219658 chr2R 18219716 18219741 8 83 5.0 6.0 5.5 1.2 108 chr2R 18219633 intergenic not near genes chr2R 18219687 intergenic not near genes chr2R 18219741 intergenic not near genes chr2R_8_18215001 chr2R_18215001 S1 779 chr2R 18308283 18308317 chr2R 18308390 18308424 6 107 3.0 2.5 2.8 1.6 141 chr2R 18308283 intron sbb - chr2R 18308354 intron sbb - chr2R 18308424 intron sbb - chr2R_6_18305001 chr2R_18305001 S1 780 chr2R 18358409 18358414 chr2R 18372621 18372627 roo 4 14213 0.0 2.0 1.0 2.0 14218 chr2R 18358409 intergenic not near genes chr2R 18365518 intergenic not near genes chr2R 18372627 intergenic not near genes chr2R_4_18365001 chr2R_18365001 S1 781 chr2R 18398158 18398191 chr2R 18398254 18398286 7 95 0.0 2.0 1.0 3.5 128 chr2R 18398158 intron GstE10 - chr2R 18398222 intron GstE10 - chr2R 18398286 intron GstE10 - chr2R_7_18395001 chr2R_18395001 S1 782 chr2R 18408279 18408315 chr2R 18408401 18408437 12 122 3.0 4.0 3.5 2.7 158 chr2R 18408279 exon GstE8 + chr2R 18408358 exon GstE8 + chr2R 18408437 exon GstE8 + chr2R_12_18405001 chr2R_18405001 S1 783 chr2R 18528196 18528222 chr2R 18528282 18528291 10 84 2.0 4.5 3.2 2.4 95 chr2R 18528196 intron CG10924 + chr2R 18528244 intron CG10924 + chr2R 18528291 intron CG10924 + chr2R_10_18525001 chr2R_18525001 S1 784 chr2R 18547648 18547667 chr2R 18547730 18547749 5 82 1.5 3.0 2.2 1.6 101 chr2R 18547648 3` UTR Rgk2 + chr2R 18547698 3` UTR Rgk2 + chr2R 18547749 3` UTR Rgk2 + chr2R_5_18545001 chr2R_18545001 S1 785 chr2R 18575154 18575164 chr2R 18575372 18575382 4 218 0.5 2.5 1.5 1.6 228 chr2R 18575154 intron GEFmeso - chr2R 18575268 intron GEFmeso - chr2R 18575382 intron GEFmeso - chr2R_4_18575001 chr2R_18575001 S1 786 chr2R 18575796 18575810 chr2R 18581984 18581998 3S18 4 6188 10.0 4.5 7.2 0.5 6202 chr2R 18575796 intron GEFmeso - chr2R 18578897 intron GEFmeso - chr2R 18581998 intron GEFmeso - chr2R_4_18575001 chr2R_18575001 S1 787 chr2R 18575811 18575828 chr2R 18581983 18582017 3S18 11 6185 9.0 4.0 6.5 1.5 6206 chr2R 18575811 intron GEFmeso - chr2R 18578914 intron GEFmeso - chr2R 18582017 intron GEFmeso - chr2R_11_18575001 chr2R_18575001 S1 788 chr2R 18590864 18590884 chr2R 18600017 18600037 roo 9 9153 4.0 4.0 4.0 1.8 9173 chr2R 18590864 intron GEFmeso - chr2R 18595450 intron GEFmeso - chr2R 18600037 intron GEFmeso - chr2R_9_18595001 chr2R_18595001 S1 789 chr2R 18646422 18646431 chr2R 18646568 18646577 4 146 2.0 6.5 4.2 0.8 155 chr2R 18646422 intron SP2637 - chr2R 18646500 intron SP2637 - chr2R 18646577 intron SP2637 - chr2R_4_18645001 chr2R_18645001 S1 790 chr2R 18675160 18675169 chr2R 18675239 18675248 5 79 0.0 2.5 1.2 2.3 88 chr2R 18675160 intergenic not near genes chr2R 18675204 intergenic not near genes chr2R 18675248 intergenic not near genes chr2R_5_18675001 chr2R_18675001 S1 791 chr2R 18785913 18785947 chr2R 18785993 18786027 15 80 3.0 3.5 3.2 3.6 114 chr2R 18785913 intron CG15080 + chr2R 18785970 intron CG15080 + chr2R 18786027 intron CG15080 + chr2R_15_18785001 chr2R_18785001 S1 792 chr2R 18808067 18808084 chr2R 18808157 18808174 5 90 0.0 0.0 0.0 5.0 107 chr2R 18808067 intergenic CG15096 - chr2R 18808120 intergenic CG15096 - chr2R 18808174 intergenic CG15096 - chr2R_5_18805001 chr2R_18805001 S1 793 chr2R 18863316 18863351 chr2R 18863399 18863434 16 83 1.0 5.5 3.2 3.8 118 chr2R 18863316 intergenic CG43069 + chr2R 18863375 intergenic CG43069 + chr2R 18863434 intergenic CG43069 +,CG43070 + chr2R_16_18860001 chr2R_18860001 S1 794 chr2R 18871644 18871676 chr2R 18871730 18871762 16 86 6.0 0.0 3.0 4.0 118 chr2R 18871644 intergenic not near genes chr2R 18871703 intergenic not near genes chr2R 18871762 intergenic not near genes chr2R_16_18870001 chr2R_18870001 S1 795 chr2R 18926506 18926528 chr2R 18926594 18926610 8 87 0.5 1.5 1.0 4.0 104 chr2R 18926506 intron sano + chr2R 18926558 intron sano + chr2R 18926610 intron sano + chr2R_8_18925001 chr2R_18925001 S1 796 chr2R 18953162 18953172 chr2R 18953250 18953260 5 88 4.5 1.0 2.8 1.3 98 chr2R 18953162 intron sano + chr2R 18953211 intron sano + chr2R 18953260 intron sano + chr2R_5_18950001 chr2R_18950001 S1 797 chr2R 18964919 18964953 chr2R 18964996 18965030 13 77 3.0 3.5 3.2 3.1 111 chr2R 18964919 intergenic not near genes chr2R 18964974 intergenic not near genes chr2R 18965030 intergenic not near genes chr2R_13_18960001 chr2R_18960001 S1 798 chr2R 18992030 18992049 chr2R 18992166 18992191 7 138 0.5 3.0 1.8 2.5 161 chr2R 18992030 intron tn + chr2R 18992110 intron tn + chr2R 18992191 intron tn + chr2R_7_18990001 chr2R_18990001 S1 799 chr2R 19007103 19007129 chr2R 19007203 19007230 10 101 4.0 5.5 4.8 1.7 127 chr2R 19007103 intron tn + chr2R 19007166 intron tn + chr2R 19007230 intron tn + chr2R_10_19005001 chr2R_19005001 S1 800 chr2R 19012944 19012963 chr2R 19013039 19013058 8 95 4.5 3.0 3.8 1.7 114 chr2R 19012944 intergenic not near genes chr2R 19013001 intergenic not near genes chr2R 19013058 intergenic not near genes chr2R_8_19010001 chr2R_19010001 S1 801 chr2R 19222118 19222133 chr2R 19222556 19222571 5 438 3.0 4.5 3.8 1.0 453 chr2R 19222118 intron hppy + chr2R 19222344 intron hppy + chr2R 19222571 intron hppy + chr2R_5_19220001 chr2R_19220001 S1 802 chr2R 19528107 19528124 chr2R 19528185 19528202 4 78 0.0 1.5 0.8 2.2 95 chr2R 19528107 3` UTR sm - chr2R 19528154 3` UTR sm - chr2R 19528202 3` UTR sm - chr2R_4_19525001 chr2R_19525001 S1 803 chr2R 19537140 19537172 chr2R 19537230 19537261 7 90 2.0 2.5 2.2 2.2 121 chr2R 19537140 intron sm - chr2R 19537200 intron sm - chr2R 19537261 intron sm - chr2R_7_19535001 chr2R_19535001 S1 804 chr2R 19539746 19539770 chr2R 19539862 19539886 7 116 2.5 3.5 3.0 1.8 140 chr2R 19539746 intron sm - chr2R 19539816 intron sm - chr2R 19539886 intron sm - chr2R_7_19535001 chr2R_19535001 S1 805 chr2R 19715852 19715857 chr2R 19723322 19723327 blood 4 7470 12.5 6.5 9.5 0.4 7475 chr2R 19715852 intergenic not near genes chr2R 19719590 intergenic not near genes chr2R 19723327 intergenic not near genes chr2R_4_19715001 chr2R_19715001 S1 806 chr2R 19776592 19776629 chr2R 19779916 19779953 jockey 10 3324 4.0 5.0 4.5 1.8 3361 chr2R 19776592 intergenic not near genes chr2R 19778272 intergenic not near genes chr2R 19779953 intergenic not near genes chr2R_10_19775001 chr2R_19775001 S1 807 chr2R 19914845 19914867 chr2R 19922258 19922280 mdg1 7 7413 9.0 1.0 5.0 1.2 7435 chr2R 19914845 intergenic not near genes chr2R 19918562 intergenic not near genes chr2R 19922280 intergenic not near genes chr2R_7_19915001 chr2R_19915001 S1 808 chr2R 19957434 19957460 chr2R 19962637 19962663 copia 9 5203 2.0 2.0 2.0 3.0 5229 chr2R 19957434 intergenic CG44623 + chr2R 19960048 intergenic not near genes chr2R 19962663 intergenic not near genes chr2R_9_19960001 chr2R_19960001 S1 809 chr2R 20069245 20069274 chr2R 20071876 20071905 opus 6 2631 1.5 3.0 2.2 1.9 2660 chr2R 20069245 intergenic not near genes chr2R 20070575 intergenic not near genes chr2R 20071905 intergenic not near genes chr2R_6_20070001 chr2R_20070001 S1 810 chr2R 20079840 20079871 chr2R 20079917 20079954 7 82 0.0 4.0 2.0 2.3 114 chr2R 20079840 intergenic not near genes chr2R 20079897 intergenic not near genes chr2R 20079954 intergenic not near genes chr2R_7_20075001 chr2R_20075001 S1 811 chr2R 20118878 20118905 chr2R 20118966 20118988 8 88 3.0 4.0 3.5 1.8 110 chr2R 20118878 intergenic not near genes chr2R 20118933 intergenic not near genes chr2R 20118988 intergenic not near genes chr2R_8_20115001 chr2R_20115001 S1 812 chr2R 20125732 20125746 chr2R 20125809 20125823 4 77 1.5 2.0 1.8 1.4 91 chr2R 20125732 intergenic not near genes chr2R 20125778 intergenic not near genes chr2R 20125823 intergenic not near genes chr2R_4_20125001 chr2R_20125001 S1 813 chr2R 20142470 20142481 chr2R 20142547 20142558 4 77 0.0 4.0 2.0 1.3 88 chr2R 20142470 intergenic not near genes chr2R 20142514 intergenic not near genes chr2R 20142558 intergenic not near genes chr2R_4_20140001 chr2R_20140001 S1 814 chr2R 20337190 20337223 chr2R 20337280 20337313 9 89 1.5 1.0 1.2 4.1 123 chr2R 20337190 intergenic not near genes chr2R 20337252 intergenic not near genes chr2R 20337313 intergenic not near genes chr2R_9_20335001 chr2R_20335001 S1 815 chr2R 20415647 20415672 chr2R 20415728 20415753 9 81 4.5 2.0 3.2 2.1 106 chr2R 20415647 intergenic not near genes chr2R 20415700 intergenic not near genes chr2R 20415753 intergenic not near genes chr2R_9_20415001 chr2R_20415001 S1 816 chr2R 20523039 20523068 chr2R 20523150 20523180 18 112 5.5 6.5 6.0 2.6 141 chr2R 20523039 intergenic not near genes chr2R 20523110 intergenic not near genes chr2R 20523180 intergenic not near genes chr2R_18_20520001 chr2R_20520001 S1 817 chr2R 20572571 20572586 chr2R 20572661 20572677 6 91 2.5 3.0 2.8 1.6 106 chr2R 20572571 intron qsm - chr2R 20572624 intron qsm - chr2R 20572677 intron qsm - chr2R_6_20570001 chr2R_20570001 S1 818 chr2R 20739461 20739477 chr2R 20744230 20744246 F-element 7 4769 4.0 8.5 6.2 1.0 4785 chr2R 20739461 intron dpr + chr2R 20741854 intron dpr + chr2R 20744246 intron dpr + chr2R_7_20740001 chr2R_20740001 S1 819 chr2R 20783315 20783333 chr2R 20788088 20788105 F-element 5 4773 1.5 3.0 2.2 1.6 4790 chr2R 20783315 intergenic not near genes chr2R 20785710 intergenic not near genes chr2R 20788105 intergenic CG43666 - chr2R_5_20785001 chr2R_20785001 S1 820 chr2R 20865709 20865736 chr2R 20865793 20865820 17 84 3.5 2.0 2.8 4.5 111 chr2R 20865709 intron CG15227 + chr2R 20865764 intron CG15227 + chr2R 20865820 intron CG15227 + chr2R_17_20865001 chr2R_20865001 S1 821 chr2R 20962906 20962937 chr2R 20963005 20963036 16 99 3.0 4.0 3.5 3.6 130 chr2R 20962906 intergenic not near genes chr2R 20962971 intergenic not near genes chr2R 20963036 intergenic not near genes chr2R_16_20960001 chr2R_20960001 S1 822 chr2R 21034276 21034307 chr2R 21034390 21034420 5 114 0.0 4.0 2.0 1.7 144 chr2R 21034276 intergenic not near genes chr2R 21034348 intergenic not near genes chr2R 21034420 intergenic not near genes chr2R_5_21030001 chr2R_21030001 S1 823 chr2R 21040868 21040892 chr2R 21040945 21040969 9 77 3.5 4.5 4.0 1.8 101 chr2R 21040868 intergenic not near genes chr2R 21040918 intergenic not near genes chr2R 21040969 intergenic not near genes chr2R_9_21040001 chr2R_21040001 S1 824 chr2R 21045664 21045696 chr2R 21045963 21045995 13 299 3.0 4.0 3.5 2.9 331 chr2R 21045664 intergenic not near genes chr2R 21045830 intergenic not near genes chr2R 21045995 intergenic not near genes chr2R_13_21045001 chr2R_21045001 S1 825 chr2R 21141119 21141147 chr2R 21141216 21141244 14 97 0.5 3.0 1.8 5.0 125 chr2R 21141119 intron Magi - chr2R 21141182 intron Magi - chr2R 21141244 intron Magi - chr2R_14_21140001 chr2R_21140001 S1 826 chr2R 21151128 21151136 chr2R 21153762 21153770 opus 6 2634 0.5 3.0 1.8 2.1 2642 chr2R 21151128 intron CG30389 - chr2R 21152449 intron CG30389 - chr2R 21153770 intron CG30389 - chr2R_6_21150001 chr2R_21150001 S1 827 chr2R 21180579 21180605 chr2R 21180759 21180793 22 185 4.0 10.0 7.0 2.8 214 chr2R 21180579 intron Pu + chr2R 21180686 intron Pu + chr2R 21180793 intron Pu + chr2R_22_21180001 chr2R_21180001 S1 828 chr2R 21188216 21188225 chr2R 21188298 21188307 7 82 8.5 3.5 6.0 1.0 91 chr2R 21188216 exon tud + chr2R 21188262 intron tud + chr2R 21188307 intron tud + chr2R_7_21185001 chr2R_21185001 S1 829 chr2R 21217326 21217332 chr2R 21217414 21217420 5 88 0.0 0.0 0.0 5.0 94 chr2R 21217326 exon CG15661 - chr2R 21217373 5` UTR CG15661 - chr2R 21217420 5` UTR CG15661 - chr2R_5_21215001 chr2R_21215001 S1 830 chr2R 21232645 21232655 chr2R 21232816 21232826 7 171 9.0 0.0 4.5 1.3 181 chr2R 21232645 intron ASPP - chr2R 21232736 intron ASPP - chr2R 21232826 intron ASPP - chr2R_7_21230001 chr2R_21230001 S1 831 chr2R 21322933 21322970 chr2R 21323018 21323055 25 84 5.5 5.0 5.2 4.0 122 chr2R 21322933 5` UTR CG30394 - chr2R 21322994 5` UTR CG30394 - chr2R 21323055 5` UTR CG30394 - chr2R_25_21320001 chr2R_21320001 S1 832 chr2R 21421339 21421353 chr2R 21421419 21421433 4 80 7.5 4.0 5.8 0.6 94 chr2R 21421339 intron Sdc - chr2R 21421386 intron Sdc - chr2R 21421433 intron Sdc - chr2R_4_21420001 chr2R_21420001 S1 833 chr2R 21470924 21470931 chr2R 21471003 21471010 6 79 8.5 0.0 4.2 1.2 86 chr2R 21470924 intron Sdc - chr2R 21470967 intron Sdc - chr2R 21471010 intron Sdc - chr2R_6_21470001 chr2R_21470001 S1 834 chr2R 21507641 21507675 chr2R 21531060 21531095 11 23418 24.0 16.5 20.2 0.5 23454 chr2R 21507641 intron MESK2 + chr2R 21519368 exon CG30288 - chr2R 21531095 intron Egfr + chr2R_11_21515001 chr2R_21515001 S1 835 chr2R 21522071 21522079 chr2R 21522206 21522214 4 135 1.5 6.0 3.8 0.8 143 chr2R 21522071 intergenic CG30289 -,Egfr + chr2R 21522142 intergenic Egfr +,CG30289 - chr2R 21522214 intergenic Egfr +,CG30289 - chr2R_4_21520001 chr2R_21520001 S1 836 chr2R 21546788 21546817 chr2R 21546870 21546899 12 81 5.5 4.5 5.0 2.0 111 chr2R 21546788 intron Egfr + chr2R 21546844 intron Egfr + chr2R 21546899 intron Egfr + chr2R_12_21545001 chr2R_21545001 S1 837 chr2R 21592842 21592853 chr2R 21592926 21592937 5 82 9.0 13.5 11.2 0.4 95 chr2R 21592842 intergenic not near genes chr2R 21592890 intergenic not near genes chr2R 21592937 intergenic not near genes chr2R_5_21590001 chr2R_21590001 S1 838 chr2R 21593573 21593609 chr2R 21594284 21594320 38 709 8.0 10.5 9.2 3.7 747 chr2R 21593573 intergenic not near genes chr2R 21593946 intergenic not near genes chr2R 21594320 intergenic not near genes chr2R_38_21590001 chr2R_21590001 S1 839 chr2R 21665608 21665614 chr2R 21665920 21665937 5 321 2.0 3.0 2.5 1.4 329 chr2R 21665608 3` UTR,exon CG42362 +,CG42363 + chr2R 21665772 3` UTR,3` UTR CG42362 +,CG42363 + chr2R 21665937 3` UTR,3` UTR CG42362 +,CG42363 + chr2R_5_21665001 chr2R_21665001 S1 840 chr2R 21700154 21700179 chr2R 21700241 21700264 17 87 11.5 4.5 8.0 1.9 110 chr2R 21700154 intron HmgZ - chr2R 21700209 intron HmgZ - chr2R 21700264 intron HmgZ - chr2R_17_21700001 chr2R_21700001 S1 841 chr2R 21721579 21721611 chr2R 21721668 21721700 15 89 3.0 2.5 2.8 3.9 121 chr2R 21721579 intron LBR + chr2R 21721640 intron LBR + chr2R 21721700 intron LBR + chr2R_15_21720001 chr2R_21720001 S1 842 chr2R 21738275 21738311 chr2R 21747436 21747461 roo 14 9160 2.5 4.5 3.5 3.1 9186 chr2R 21738275 intergenic not near genes chr2R 21742868 intergenic not near genes chr2R 21747461 intergenic not near genes chr2R_14_21740001 chr2R_21740001 S1 843 chr2R 21753082 21753112 chr2R 21753567 21753598 roo 15 485 4.0 5.5 4.8 2.6 516 chr2R 21753082 intergenic not near genes chr2R 21753340 intergenic not near genes chr2R 21753598 intergenic not near genes chr2R_15_21750001 chr2R_21750001 S1 844 chr2R 21796455 21796484 chr2R 21796540 21796569 15 85 4.0 7.0 5.5 2.3 114 chr2R 21796455 5` UTR CG34204 + chr2R 21796512 5` UTR CG34204 + chr2R 21796569 exon CG34204 + chr2R_15_21795001 chr2R_21795001 S1 845 chr2R 21809525 21809553 chr2R 21817766 21817794 roo 10 8241 6.5 5.0 5.8 1.5 8269 chr2R 21809525 intergenic not near genes chr2R 21813660 intergenic not near genes chr2R 21817794 intergenic not near genes chr2R_10_21810001 chr2R_21810001 S1 846 chr2R 21857344 21857372 chr2R 21857436 21857464 12 92 5.5 4.5 5.0 2.0 120 chr2R 21857344 intergenic not near genes chr2R 21857404 intergenic not near genes chr2R 21857464 intergenic not near genes chr2R_12_21855001 chr2R_21855001 S1 847 chr2R 21889294 21889325 chr2R 21889518 21889549 16 224 2.0 2.0 2.0 5.3 255 chr2R 21889294 intron Fili + chr2R 21889422 intron Fili + chr2R 21889549 intron Fili + chr2R_16_21885001 chr2R_21885001 S1 848 chr2R 21906289 21906300 chr2R 21906391 21906402 5 102 5.0 5.5 5.2 0.8 113 chr2R 21906289 intron Fili + chr2R 21906346 intron Fili + chr2R 21906402 intron Fili + chr2R_5_21905001 chr2R_21905001 S1 849 chr2R 21911836 21911869 chr2R 21911944 21911977 15 108 3.0 5.5 4.2 2.9 141 chr2R 21911836 intron Fili + chr2R 21911906 intron Fili + chr2R 21911977 intron Fili + chr2R_15_21910001 chr2R_21910001 S1 850 chr2R 21955157 21955178 chr2R 21955264 21955284 7 106 0.0 5.5 2.8 1.8 127 chr2R 21955157 intergenic CG13494 - chr2R 21955220 intergenic CG13494 - chr2R 21955284 intergenic CG13494 - chr2R_7_21955001 chr2R_21955001 S1 851 chr2R 21963199 21963210 chr2R 21963285 21963296 5 86 4.0 3.0 3.5 1.1 97 chr2R 21963199 intergenic not near genes chr2R 21963248 intergenic not near genes chr2R 21963296 intergenic not near genes chr2R_5_21960001 chr2R_21960001 S1 852 chr2R 22003087 22003122 chr2R 22003174 22003209 16 87 3.0 0.5 1.8 5.7 122 chr2R 22003087 intron CG34370 - chr2R 22003148 intron CG34370 - chr2R 22003209 intron CG34370 - chr2R_16_22000001 chr2R_22000001 S1 853 chr2R 22012998 22013009 chr2R 22013094 22013105 6 96 4.5 7.5 6.0 0.9 107 chr2R 22012998 intron CG34370 - chr2R 22013052 intron CG34370 - chr2R 22013105 intron CG34370 - chr2R_6_22010001 chr2R_22010001 S1 854 chr2R 22029485 22029495 chr2R 22029624 22029634 6 139 3.5 5.0 4.2 1.2 149 chr2R 22029485 intron CG34370 - chr2R 22029560 intron CG34370 - chr2R 22029634 intron CG34370 - chr2R_6_22025001 chr2R_22025001 S1 855 chr2R 22033826 22033857 chr2R 22033913 22033944 16 87 1.0 3.0 2.0 5.3 118 chr2R 22033826 intron CG34370 - chr2R 22033885 intron CG34370 - chr2R 22033944 intron CG34370 - chr2R_16_22030001 chr2R_22030001 S1 856 chr2R 22048825 22048859 chr2R 22049036 22049070 16 210 2.0 3.5 2.8 4.2 245 chr2R 22048825 intergenic not near genes chr2R 22048948 intergenic not near genes chr2R 22049070 intergenic not near genes chr2R_16_22045001 chr2R_22045001 S1 857 chr2R 22349689 22349719 chr2R 22351474 22351504 jockey 9 1785 7.5 8.0 7.8 1.0 1815 chr2R 22349689 intron Liprin-gamma - chr2R 22350596 intron Liprin-gamma - chr2R 22351504 intron Liprin-gamma - chr2R_9_22350001 chr2R_22350001 S1 858 chr2R 22360380 22360396 chr2R 22360814 22360830 jockey 10 434 9.5 6.0 7.8 1.1 450 chr2R 22360380 intron Liprin-gamma - chr2R 22360605 intron Liprin-gamma - chr2R 22360830 intron Liprin-gamma - chr2R_10_22360001 chr2R_22360001 S1 859 chr2R 22377802 22377831 chr2R 22377889 22377918 12 87 5.0 2.5 3.8 2.5 116 chr2R 22377802 3` UTR Rtf1 + chr2R 22377860 3` UTR Rtf1 + chr2R 22377918 3` UTR Rtf1 + chr2R_12_22375001 chr2R_22375001 S1 860 chr2R 22453211 22453220 chr2R 22453315 22453324 4 104 0.0 3.0 1.5 1.6 113 chr2R 22453211 intergenic not near genes chr2R 22453268 intergenic not near genes chr2R 22453324 intergenic not near genes chr2R_4_22450001 chr2R_22450001 S1 861 chr2R 22460385 22460405 chr2R 22460465 22460485 12 80 2.0 8.5 5.2 1.9 100 chr2R 22460385 intron CG10384 + chr2R 22460435 intron CG10384 + chr2R 22460485 intron CG10384 + chr2R_12_22460001 chr2R_22460001 S1 862 chr2R 22477576 22477609 chr2R 22477682 22477715 18 106 6.0 5.0 5.5 2.8 139 chr2R 22477576 intergenic CG45063 - chr2R 22477646 intergenic CG45063 - chr2R 22477715 intergenic CG45063 - chr2R_18_22475001 chr2R_22475001 S1 863 chr2R 22503867 22503894 chr2R 22503963 22503990 4 96 0.0 2.0 1.0 2.0 123 chr2R 22503867 intron px - chr2R 22503928 intron px - chr2R 22503990 intron px - chr2R_4_22500001 chr2R_22500001 S1 864 chr2R 22525747 22525785 chr2R 22529302 22529341 jockey 16 3555 2.0 5.0 3.5 3.6 3594 chr2R 22525747 intron px - chr2R 22527544 intron px - chr2R 22529341 intron px - chr2R_16_22525001 chr2R_22525001 S1 865 chr2R 22545621 22545651 chr2R 22545701 22545731 8 80 3.0 2.0 2.5 2.3 110 chr2R 22545621 intron px - chr2R 22545676 intron px - chr2R 22545731 intron px - chr2R_8_22545001 chr2R_22545001 S1 866 chr2R 22568884 22568911 chr2R 22569090 22569117 11 206 5.5 4.5 5.0 1.8 233 chr2R 22568884 intron dnr1 - chr2R 22569000 intron dnr1 - chr2R 22569117 intron dnr1 - chr2R_11_22565001 chr2R_22565001 S1 867 chr2R 22575730 22575765 chr2R 22576125 22576160 16 393 3.0 3.5 3.2 3.8 430 chr2R 22575730 intron dnr1 - chr2R 22575945 intron dnr1 - chr2R 22576160 intron dnr1 - chr2R_16_22575001 chr2R_22575001 S1 868 chr2R 22588151 22588158 chr2R 22588245 22588254 7 95 10.0 10.0 10.0 0.6 103 chr2R 22588151 intron dnr1 - chr2R 22588202 intron dnr1 - chr2R 22588254 intron dnr1 - chr2R_7_22585001 chr2R_22585001 S1 869 chr2R 22594754 22594773 chr2R 22650693 22650712 4 55939 5.0 31.5 18.2 0.2 55958 chr2R 22594754 exon CG3927 + chr2R 22622733 intron CG33143 + chr2R 22650712 exon nsr + chr2R_4_22620001 chr2R_22620001 S1 870 chr2R 22596208 22596243 chr2R 22596288 22596323 10 80 3.0 3.0 3.0 2.5 115 chr2R 22596208 3` UTR CG3927 + chr2R 22596266 3` UTR CG3927 + chr2R 22596323 3` UTR CG3927 + chr2R_10_22595001 chr2R_22595001 S1 871 chr2R 22620829 22620859 chr2R 22620930 22620960 9 101 1.5 4.5 3.0 2.2 131 chr2R 22620829 5` UTR CG33143 + chr2R 22620894 5` UTR CG33143 + chr2R 22620960 5` UTR CG33143 + chr2R_9_22620001 chr2R_22620001 S1 872 chr2R 22623452 22623481 chr2R 22623593 22623622 16 141 5.5 6.5 6.0 2.3 170 chr2R 22623452 intron CG33143 + chr2R 22623537 intron CG33143 + chr2R 22623622 intron CG33143 + chr2R_16_22620001 chr2R_22620001 S1 873 chr2R 22663131 22663164 chr2R 22663212 22663245 14 81 2.0 4.0 3.0 3.5 114 chr2R 22663131 3` UTR CG42566 + chr2R 22663188 3` UTR CG42566 + chr2R 22663245 intergenic CG42566 +,CG4250 + chr2R_14_22660001 chr2R_22660001 S1 874 chr2R 22756550 22756585 chr2R 22756628 22756663 18 78 8.0 5.5 6.8 2.3 113 chr2R 22756550 intron,intron CG42260 -,CR30267 + chr2R 22756606 intron,intron CG42260 -,CR30267 + chr2R 22756663 intron,intron CG42260 -,CR30267 + chr2R_18_22755001 chr2R_22755001 S1 875 chr2R 22774963 22774996 chr2R 22775383 22775416 jockey 17 420 3.0 7.0 5.0 2.8 453 chr2R 22774963 intron CG42260 - chr2R 22775190 intron CG42260 - chr2R 22775416 intron CG42260 - chr2R_17_22775001 chr2R_22775001 S1 876 chr2R 22780659 22780678 chr2R 22780766 22780785 7 107 2.0 6.0 4.0 1.4 126 chr2R 22780659 intron CG42260 - chr2R 22780722 intron CG42260 - chr2R 22780785 intron CG42260 - chr2R_7_22780001 chr2R_22780001 S1 877 chr2R 22810565 22810575 chr2R 22810682 22810692 7 117 8.5 0.0 4.2 1.3 127 chr2R 22810565 intron stl + chr2R 22810628 intron stl + chr2R 22810692 intron stl + chr2R_7_22810001 chr2R_22810001 S1 878 chr2R 22843028 22843053 chr2R 22844991 22845016 flea 8 1963 6.0 4.5 5.2 1.3 1988 chr2R 22843028 intergenic CG9826 + chr2R 22844022 intergenic not near genes chr2R 22845016 intergenic not near genes chr2R_8_22840001 chr2R_22840001 S1 879 chr2R 22905033 22905059 chr2R 22905169 22905195 9 136 4.5 0.0 2.2 2.8 162 chr2R 22905033 intron nahoda + chr2R 22905114 intron nahoda + chr2R 22905195 intron nahoda + chr2R_9_22905001 chr2R_22905001 S1 880 chr2R 23052648 23052688 chr2R 23052725 23052765 10 77 3.0 8.5 5.8 1.5 117 chr2R 23052648 intergenic not near genes chr2R 23052706 intergenic not near genes chr2R 23052765 intergenic not near genes chr2R_10_23050001 chr2R_23050001 S1 881 chr2R 23053999 23054029 chr2R 23054078 23054102 9 78 5.5 5.5 5.5 1.4 103 chr2R 23053999 intergenic not near genes chr2R 23054050 intergenic not near genes chr2R 23054102 intergenic not near genes chr2R_9_23050001 chr2R_23050001 S1 882 chr2R 23061749 23061759 chr2R 23061867 23061877 9 118 5.5 8.5 7.0 1.1 128 chr2R 23061749 3` UTR l(2)06496 - chr2R 23061813 3` UTR l(2)06496 - chr2R 23061877 3` UTR l(2)06496 - chr2R_9_23060001 chr2R_23060001 S1 883 chr2R 23158345 23158356 chr2R 23158423 23158434 9 78 10.0 10.5 10.2 0.8 89 chr2R 23158345 intron CG9899 + chr2R 23158390 intron CG9899 + chr2R 23158434 intron CG9899 + chr2R_9_23155001 chr2R_23155001 S1 884 chr2R 23175037 23175065 chr2R 23175115 23175143 12 78 5.0 5.5 5.2 1.9 106 chr2R 23175037 intron CG34371 - chr2R 23175090 intron CG34371 - chr2R 23175143 intron CG34371 - chr2R_12_23175001 chr2R_23175001 S1 885 chr2R 23188558 23188585 chr2R 23188637 23188664 10 79 1.5 1.5 1.5 4.0 106 chr2R 23188558 intron CG34371 - chr2R 23188611 intron CG34371 - chr2R 23188664 intron CG34371 - chr2R_10_23185001 chr2R_23185001 S1 886 chr2R 23228293 23228326 chr2R 23228398 23228431 18 105 4.5 3.5 4.0 3.6 138 chr2R 23228293 intergenic not near genes chr2R 23228362 intergenic not near genes chr2R 23228431 intergenic not near genes chr2R_18_23225001 chr2R_23225001 S1 887 chr2R 23254706 23254731 chr2R 23255114 23255139 15 408 6.5 4.0 5.2 2.4 433 chr2R 23254706 intergenic not near genes chr2R 23254922 intergenic not near genes chr2R 23255139 intergenic not near genes chr2R_15_23250001 chr2R_23250001 S1 888 chr2R 23295407 23295435 chr2R 23295515 23295543 10 108 4.5 3.5 4.0 2.0 136 chr2R 23295407 intergenic not near genes chr2R 23295475 intergenic not near genes chr2R 23295543 intergenic not near genes chr2R_10_23295001 chr2R_23295001 S1 889 chr2R 23303845 23303877 chr2R 23304077 23304109 19 231 4.0 7.5 5.8 2.8 264 chr2R 23303845 intergenic not near genes chr2R 23303977 intergenic not near genes chr2R 23304109 intergenic not near genes chr2R_19_23300001 chr2R_23300001 S1 890 chr2R 23331828 23331854 chr2R 23331929 23331955 7 101 4.0 3.0 3.5 1.6 127 chr2R 23331828 intergenic not near genes chr2R 23331892 intergenic not near genes chr2R 23331955 intergenic not near genes chr2R_7_23330001 chr2R_23330001 S1 891 chr2R 23356274 23356310 chr2R 23356362 23356400 15 90 3.0 5.5 4.2 2.9 126 chr2R 23356274 3` UTR Rpi + chr2R 23356337 3` UTR Rpi + chr2R 23356400 3` UTR,3` UTR Rpi +,CG3500 - chr2R_15_23355001 chr2R_23355001 S1 892 chr2R 23368813 23368842 chr2R 23368930 23368959 11 117 3.0 2.0 2.5 3.1 146 chr2R 23368813 exon Ice1 + chr2R 23368886 exon Ice1 + chr2R 23368959 exon Ice1 + chr2R_11_23365001 chr2R_23365001 S1 893 chr2R 23422644 23422678 chr2R 23422725 23422759 35 81 6.0 7.0 6.5 4.7 115 chr2R 23422644 intron CG9815 - chr2R 23422702 intron CG9815 - chr2R 23422759 intron CG9815 - chr2R_35_23420001 chr2R_23420001 S1 894 chr2R 23436729 23436759 chr2R 23436814 23436844 15 85 5.5 4.0 4.8 2.6 115 chr2R 23436729 intergenic not near genes chr2R 23436786 intergenic not near genes chr2R 23436844 intergenic not near genes chr2R_15_23435001 chr2R_23435001 S1 895 chr2R 23437228 23437243 chr2R 23437306 23437313 9 75 7.0 9.0 8.0 1.0 85 chr2R 23437228 intergenic not near genes chr2R 23437270 intergenic not near genes chr2R 23437313 intergenic not near genes chr2R_9_23435001 chr2R_23435001 S1 896 chr2R 23448954 23448988 chr2R 23449041 23449075 19 87 3.5 3.0 3.2 4.5 121 chr2R 23448954 intron CG43795 + chr2R 23449014 intron CG43795 + chr2R 23449075 intron CG43795 + chr2R_19_23445001 chr2R_23445001 S1 897 chr2R 23508929 23508943 chr2R 23509047 23509061 10 118 3.5 2.5 3.0 2.5 132 chr2R 23508929 intergenic not near genes chr2R 23508995 intergenic not near genes chr2R 23509061 intergenic not near genes chr2R_10_23505001 chr2R_23505001 S1 898 chr2R 23518194 23518209 chr2R 23518273 23518288 8 79 5.0 3.5 4.2 1.5 94 chr2R 23518194 intergenic not near genes chr2R 23518241 intergenic not near genes chr2R 23518288 intergenic not near genes chr2R_8_23515001 chr2R_23515001 S1 899 chr2R 23529571 23529606 chr2R 23537148 23537183 412 34 7574 5.0 8.0 6.5 4.5 7612 chr2R 23529571 intron bw - chr2R 23533377 intron bw - chr2R 23537183 exon bw - chr2R_34_23530001 chr2R_23530001 S1 900 chr2R 23571065 23571094 chr2R 23571350 23571379 15 285 5.5 4.5 5.0 2.5 314 chr2R 23571065 intron apt + chr2R 23571222 intron apt + chr2R 23571379 intron apt + chr2R_15_23570001 chr2R_23570001 S1 901 chr2R 23619168 23619205 chr2R 23619297 23619334 17 129 7.0 5.5 6.2 2.4 166 chr2R 23619168 intergenic not near genes chr2R 23619251 intergenic not near genes chr2R 23619334 intergenic not near genes chr2R_17_23615001 chr2R_23615001 S1 902 chr2R 23758323 23758357 chr2R 23758400 23758434 15 77 5.0 6.0 5.5 2.3 111 chr2R 23758323 intron CG9850 - chr2R 23758378 intron CG9850 - chr2R 23758434 intron CG9850 - chr2R_15_23755001 chr2R_23755001 S1 903 chr2R 23819910 23819945 chr2R 23820002 23820036 9 90 2.5 6.0 4.2 1.7 126 chr2R 23819910 intergenic CG5549 + chr2R 23819973 intergenic CG5549 + chr2R 23820036 intergenic CG5549 + chr2R_9_23815001 chr2R_23815001 S1 904 chr2R 23832875 23832909 chr2R 23832975 23833009 19 100 4.5 5.5 5.0 3.2 134 chr2R 23832875 intron CG5549 + chr2R 23832942 intron CG5549 + chr2R 23833009 intron CG5549 + chr2R_19_23830001 chr2R_23830001 S1 905 chr2R 23914296 23914329 chr2R 23921921 23921954 412 28 7625 6.5 14.5 10.5 2.4 7658 chr2R 23914296 exon kcc + chr2R 23918125 intron kcc + chr2R 23921954 intron kcc + chr2R_28_23915001 chr2R_23915001 S1 906 chr2R 23926828 23926865 chr2R 23926911 23926948 21 83 3.0 3.5 3.2 5.0 120 chr2R 23926828 3` UTR,3` UTR Ca-P60A -,CG2812 + chr2R 23926888 3` UTR,3` UTR Ca-P60A -,CG2812 + chr2R 23926948 3` UTR Ca-P60A - chr2R_21_23925001 chr2R_23925001 S1 907 chr2R 23986513 23986547 chr2R 23986592 23986628 16 81 4.5 4.5 4.5 2.9 115 chr2R 23986513 intron Phm - chr2R 23986570 intron Phm - chr2R 23986628 intron,5` UTR Phm -,CG30178 + chr2R_16_23985001 chr2R_23985001 S1 908 chr2R 24025712 24025739 chr2R 24025815 24025842 16 103 6.0 4.5 5.2 2.6 130 chr2R 24025712 3` UTR,3` UTR CR45350 -,Adk2 + chr2R 24025777 3` UTR,3` UTR CR45350 -,Adk2 + chr2R 24025842 3` UTR Adk2 + chr2R_16_24025001 chr2R_24025001 S1 909 chr2R 24031382 24031414 chr2R 24031467 24031499 16 85 4.0 5.5 4.8 2.8 117 chr2R 24031382 5` UTR CG30172 - chr2R 24031440 intergenic CG30172 -,Chi - chr2R 24031499 intergenic Chi -,CG30172 - chr2R_16_24030001 chr2R_24030001 S1 910 chr2R 24130632 24130641 chr2R 24130702 24130728 7 85 2.0 7.0 4.5 1.3 96 chr2R 24130632 intron tamo - chr2R 24130680 intron tamo - chr2R 24130728 intron tamo - chr2R_7_24130001 chr2R_24130001 S1 911 chr2R 24147065 24147087 chr2R 24154644 24154664 412 9 7579 4.0 4.5 4.2 1.7 7599 chr2R 24147065 intron Dat + chr2R 24150864 intron Dat + chr2R 24154664 intron Dat + chr2R_9_24150001 chr2R_24150001 S1 912 chr2R 24166661 24166696 chr2R 24166744 24166779 16 83 9.5 2.5 6.0 2.3 118 chr2R 24166661 intron CG3328 + chr2R 24166720 intron CG3328 + chr2R 24166779 intron CG3328 + chr2R_16_24165001 chr2R_24165001 S1 913 chr2R 24177233 24177263 chr2R 24184719 24184749 412 6 7486 4.0 5.5 4.8 1.0 7516 chr2R 24177233 3` UTR Nop60B + chr2R 24180991 intron Nop60B + chr2R 24184749 3` UTR Nop60B + chr2R_6_24180001 chr2R_24180001 S1 914 chr2R 24228393 24228430 chr2R 24228475 24228504 19 73 4.0 4.0 4.0 3.8 111 chr2R 24228393 intron CG30419 - chr2R 24228448 intron CG30419 - chr2R 24228504 intron CG30419 - chr2R_19_24225001 chr2R_24225001 S1 915 chr2R 24278321 24278360 chr2R 24278406 24278439 18 83 6.5 7.5 7.0 2.2 118 chr2R 24278321 intron nvy + chr2R 24278380 intron nvy + chr2R 24278439 intron nvy + chr2R_18_24275001 chr2R_24275001 S1 916 chr2R 24292506 24292543 chr2R 24292592 24292629 22 85 5.0 6.0 5.5 3.4 123 chr2R 24292506 intergenic not near genes chr2R 24292568 intergenic not near genes chr2R 24292629 intergenic not near genes chr2R_22_24290001 chr2R_24290001 S1 917 chr2R 24320185 24320205 chr2R 24320263 24320283 11 78 2.0 9.0 5.5 1.7 98 chr2R 24320185 intergenic not near genes chr2R 24320234 intergenic not near genes chr2R 24320283 intergenic not near genes chr2R_11_24320001 chr2R_24320001 S1 918 chr2R 24353425 24353461 chr2R 24361788 24361824 roo 11 8361 1.0 3.0 2.0 3.7 8399 chr2R 24353425 intron,intron bs +,CR44811 - chr2R 24357624 intron,intron bs +,CR44811 - chr2R 24361824 intron,intron bs +,CR44811 - chr2R_11_24355001 chr2R_24355001 S1 919 chr2R 24647592 24647618 chr2R 24655147 24655176 412 8 7558 3.0 2.5 2.8 2.1 7584 chr2R 24647592 intergenic not near genes chr2R 24651384 intergenic not near genes chr2R 24655176 intergenic not near genes chr2R_8_24650001 chr2R_24650001 S1 920 chr2R 24727882 24727918 chr2R 24735391 24735425 mdg1 8 7509 2.0 2.5 2.2 2.5 7543 chr2R 24727882 intron Mid1 - chr2R 24731654 intron Mid1 - chr2R 24735425 intron Mid1 - chr2R_8_24730001 chr2R_24730001 S1 921 chr2R 24763615 24763644 chr2R 24765591 24765593 G2 6 1972 4.0 4.5 4.2 1.2 1978 chr2R 24763615 exon CG3894 + chr2R 24764604 intron CG3894 + chr2R 24765593 exon CG3894 + chr2R_6_24760001 chr2R_24760001 S1 922 chr2R 24813412 24813445 chr2R 24813511 24813544 5 99 0.5 1.5 1.0 2.5 132 chr2R 24813412 intergenic not near genes chr2R 24813478 intergenic not near genes chr2R 24813544 intergenic not near genes chr2R_5_24810001 chr2R_24810001 S1 923 chr2R 24859846 24859865 chr2R 24859933 24859952 4 87 2.0 3.0 2.5 1.1 106 chr2R 24859846 5` UTR CR44829 + chr2R 24859899 5` UTR CR44829 + chr2R 24859952 5` UTR CR44829 + chr2R_4_24855001 chr2R_24855001 S1 924 chr2R 24893100 24893132 chr2R 24893186 24893215 4 85 1.0 2.5 1.8 1.4 115 chr2R 24893100 intron NaCP60E + chr2R 24893158 intron NaCP60E + chr2R 24893215 intron NaCP60E + chr2R_4_24890001 chr2R_24890001 S1 925 chr2R 24919089 24919117 chr2R 24919344 24919372 5 255 1.5 4.0 2.8 1.3 283 chr2R 24919089 3` UTR NaCP60E + chr2R 24919230 3` UTR NaCP60E + chr2R 24919372 3` UTR NaCP60E + chr2R_5_24915001 chr2R_24915001 S1 926 chr2R 25014547 25014575 chr2R 25014623 25014652 5 77 3.0 3.0 3.0 1.2 105 chr2R 25014547 intron uzip + chr2R 25014600 intron uzip + chr2R 25014652 intron uzip + chr2R_5_25010001 chr2R_25010001 S1 927 chr2R 25018337 25018375 chr2R 25018439 25018477 6 102 1.5 2.0 1.8 2.1 140 chr2R 25018337 intron uzip + chr2R 25018407 intron uzip + chr2R 25018477 intron uzip + chr2R_6_25015001 chr2R_25015001 S1 928 chr2R 25022641 25022666 chr2R 25022726 25022751 5 85 3.5 2.5 3.0 1.2 110 chr2R 25022641 intron uzip + chr2R 25022696 intron uzip + chr2R 25022751 intron uzip + chr2R_5_25020001 chr2R_25020001 S1 929 chr2R 25101273 25101297 chr2R 25101376 25101400 6 103 2.0 1.0 1.5 2.4 127 chr2R 25101273 intron lov - chr2R 25101336 intron lov - chr2R 25101400 intron lov - chr2R_6_25100001 chr2R_25100001 S1 930 chr3L 51384 51418 chr3L 51483 51517 11 99 3.0 3.0 3.0 2.8 133 chr3L 51384 intergenic not near genes chr3L 51450 intergenic not near genes chr3L 51517 intergenic not near genes chr3L_11_50001 chr3L_50001 S1 931 chr3L 93853 93853 chr3L 21448026 21448026 5 21354173 19.0 18.5 18.8 0.3 21354173 chr3L 93853 intergenic not near genes chr3L 10770940 intergenic not near genes chr3L 21448026 3` UTR Syx7 + chr3L_5_10770001 chr3L_10770001 S1 932 chr3L 110213 110244 chr3L 119381 119412 roo 13 9167 3.0 3.5 3.2 3.1 9199 chr3L 110213 intergenic not near genes chr3L 114812 intergenic not near genes chr3L 119412 intergenic not near genes chr3L_13_110001 chr3L_110001 S1 933 chr3L 161708 161715 chr3L 162535 162542 4 827 2.5 3.5 3.0 1.0 834 chr3L 161708 intron p130CAS + chr3L 162125 intron p130CAS + chr3L 162542 intron p130CAS + chr3L_4_160001 chr3L_160001 S1 934 chr3L 274236 274272 chr3L 274321 274358 18 86 4.5 4.5 4.5 3.3 122 chr3L 274236 exon miple2 + chr3L 274297 intron miple2 + chr3L 274358 intron miple2 + chr3L_18_270001 chr3L_270001 S1 935 chr3L 349386 349412 chr3L 349469 349501 10 88 2.0 4.5 3.2 2.4 115 chr3L 349386 intron Ptpmeg + chr3L 349444 intron Ptpmeg + chr3L 349501 intron Ptpmeg + chr3L_10_345001 chr3L_345001 S1 936 chr3L 402694 402718 chr3L 409748 409772 297 14 7054 5.0 5.0 5.0 2.3 7078 chr3L 402694 intergenic not near genes chr3L 406233 intergenic not near genes chr3L 409772 intergenic not near genes chr3L_14_405001 chr3L_405001 S1 937 chr3L 522792 522812 chr3L 523325 523345 5 533 14.0 17.0 15.5 0.3 553 chr3L 522792 intron klar - chr3L 523068 intron klar - chr3L 523345 intron klar - chr3L_5_520001 chr3L_520001 S1 938 chr3L 535047 535077 chr3L 535130 535160 15 82 5.0 6.0 5.5 2.3 113 chr3L 535047 intron klar - chr3L 535104 intron klar - chr3L 535160 intron klar - chr3L_15_535001 chr3L_535001 S1 939 chr3L 544650 544684 chr3L 560480 560514 15 15830 4.0 2.5 3.2 3.6 15864 chr3L 544650 intergenic not near genes chr3L 552582 intron hipk + chr3L 560514 intron hipk + chr3L_15_550001 chr3L_550001 S1 940 chr3L 642905 642909 chr3L 643079 643083 5 174 12.5 0.0 6.2 0.7 178 chr3L 642905 5` UTR CR43334 + chr3L 642994 5` UTR CR43334 + chr3L 643083 5` UTR CR43334 + chr3L_5_640001 chr3L_640001 S1 941 chr3L 670419 670452 chr3L 670559 670590 13 140 4.5 4.5 4.5 2.4 171 chr3L 670419 intergenic not near genes chr3L 670504 intergenic not near genes chr3L 670590 intergenic not near genes chr3L_13_670001 chr3L_670001 S1 942 chr3L 705897 705932 chr3L 705994 706029 21 97 4.0 3.0 3.5 4.7 132 chr3L 705897 intergenic CG13895 -,CR44514 + chr3L 705963 3` UTR CG13895 - chr3L 706029 3` UTR CG13895 - chr3L_21_705001 chr3L_705001 S1 943 chr3L 732822 732845 chr3L 733045 733068 14 222 3.0 3.0 3.0 3.5 246 chr3L 732822 intergenic not near genes chr3L 732945 intergenic not near genes chr3L 733068 intergenic not near genes chr3L_14_730001 chr3L_730001 S1 944 chr3L 822085 822095 chr3L 822166 822176 6 81 0.0 18.0 9.0 0.6 91 chr3L 822085 intergenic not near genes chr3L 822130 intergenic not near genes chr3L 822176 intergenic not near genes chr3L_6_820001 chr3L_820001 S1 945 chr3L 843726 843740 chr3L 843808 843822 7 82 8.5 0.0 4.2 1.3 96 chr3L 843726 intergenic Gr61a +,CG13889 + chr3L 843774 intergenic Gr61a +,CG13889 + chr3L 843822 intergenic CG13889 +,Gr61a + chr3L_7_840001 chr3L_840001 S1 946 chr3L 857996 858032 chr3L 866478 866514 Tirant 22 8479 8.0 8.0 8.0 2.4 8518 chr3L 857996 intergenic not near genes chr3L 862255 intergenic not near genes chr3L 866514 5` UTR CG12502 + chr3L_22_860001 chr3L_860001 S1 947 chr3L 899995 900018 chr3L 900079 900103 9 83 0.0 2.5 1.2 4.1 108 chr3L 899995 intergenic not near genes chr3L 900049 intergenic not near genes chr3L 900103 intergenic not near genes chr3L_9_900001 chr3L_900001 S1 948 chr3L 925176 925208 chr3L 932603 932635 mdg1 7 7427 2.0 1.0 1.5 2.8 7459 chr3L 925176 intron Glut1 + chr3L 928906 intron Glut1 + chr3L 932635 intron Glut1 + chr3L_7_925001 chr3L_925001 S1 949 chr3L 933916 933944 chr3L 934020 934048 12 104 5.0 7.5 6.2 1.7 132 chr3L 933916 intron Glut1 + chr3L 933982 intron Glut1 + chr3L 934048 intron Glut1 + chr3L_12_930001 chr3L_930001 S1 950 chr3L 939770 939804 chr3L 940892 940926 jockey 15 1121 3.5 9.0 6.2 2.1 1156 chr3L 939770 intron Glut1 + chr3L 940348 intron Glut1 + chr3L 940926 intron Glut1 + chr3L_15_940001 chr3L_940001 S1 951 chr3L 958312 958346 chr3L 958397 958431 21 84 7.0 5.5 6.2 2.9 119 chr3L 958312 intron Glut1 + chr3L 958372 intron Glut1 + chr3L 958431 intron Glut1 + chr3L_21_955001 chr3L_955001 S1 952 chr3L 961020 961043 chr3L 961114 961137 7 94 2.0 4.5 3.2 1.7 117 chr3L 961020 intron Glut1 + chr3L 961078 intron Glut1 + chr3L 961137 intron Glut1 + chr3L_7_960001 chr3L_960001 S1 953 chr3L 1015025 1015054 chr3L 1015138 1015167 11 113 3.0 5.0 4.0 2.2 142 chr3L 1015025 intron trio - chr3L 1015096 intron trio - chr3L 1015167 intron trio - chr3L_11_1015001 chr3L_1015001 S1 954 chr3L 1021377 1021408 chr3L 1021458 1021489 10 81 5.5 3.0 4.2 1.9 112 chr3L 1021377 intron trio - chr3L 1021433 intron trio - chr3L 1021489 intron trio - chr3L_10_1020001 chr3L_1020001 S1 955 chr3L 1031577 1031584 chr3L 1031654 1031661 4 77 5.5 4.5 5.0 0.7 84 chr3L 1031577 intron trio - chr3L 1031619 intron trio - chr3L 1031661 intron trio - chr3L_4_1030001 chr3L_1030001 S1 956 chr3L 1031585 1031614 chr3L 1031652 1031690 11 76 2.0 4.5 3.2 2.6 105 chr3L 1031585 intron trio - chr3L 1031638 intron trio - chr3L 1031690 intron trio - chr3L_11_1030001 chr3L_1030001 S1 957 chr3L 1040547 1040578 chr3L 1040632 1040663 13 85 1.5 3.5 2.5 3.7 116 chr3L 1040547 intron bab1 - chr3L 1040605 intron bab1 - chr3L 1040663 intron bab1 - chr3L_13_1040001 chr3L_1040001 S1 958 chr3L 1154127 1154159 chr3L 1163278 1163310 roo 7 9151 3.5 4.5 4.0 1.4 9183 chr3L 1154127 intron bab2 - chr3L 1158718 intron bab2 - chr3L 1163310 intron bab2 - chr3L_7_1155001 chr3L_1155001 S1 959 chr3L 1219593 1219625 chr3L 1227327 1227359 412 10 7734 5.5 2.0 3.8 2.1 7766 chr3L 1219593 intron mwh + chr3L 1223476 intron mwh + chr3L 1227359 intron mwh + chr3L_10_1220001 chr3L_1220001 S1 960 chr3L 1260152 1260159 chr3L 1260233 1260240 4 81 2.0 2.0 2.0 1.3 88 chr3L 1260152 intron CG9134 + chr3L 1260196 intron CG9134 + chr3L 1260240 intron CG9134 + chr3L_4_1260001 chr3L_1260001 S1 961 chr3L 1276362 1276378 chr3L 1276452 1276474 6 91 2.0 2.0 2.0 2.0 112 chr3L 1276362 intron CG32333 + chr3L 1276418 intron CG32333 + chr3L 1276474 intron CG32333 + chr3L_6_1275001 chr3L_1275001 S1 962 chr3L 1347158 1347192 chr3L 1347244 1347278 15 86 2.5 5.0 3.8 3.1 120 chr3L 1347158 intron Ptp61F - chr3L 1347218 intron Ptp61F - chr3L 1347278 intron Ptp61F - chr3L_15_1345001 chr3L_1345001 S1 963 chr3L 1364057 1364066 chr3L 1364144 1364153 5 87 0.0 9.0 4.5 0.9 96 chr3L 1364057 intron Ptp61F - chr3L 1364105 intron Ptp61F - chr3L 1364153 intron Ptp61F - chr3L_5_1360001 chr3L_1360001 S1 964 chr3L 1385186 1385209 chr3L 1385275 1385298 10 89 4.5 6.0 5.2 1.6 112 chr3L 1385186 intron,intron Ptp61F -,ru + chr3L 1385242 intron,intron Ptp61F -,ru + chr3L 1385298 intron,intron Ptp61F -,ru + chr3L_10_1385001 chr3L_1385001 S1 965 chr3L 1505995 1506032 chr3L 1513593 1513630 17.6 14 7598 4.0 1.0 2.5 4.0 7635 chr3L 1505995 intron,intron Psa +,cue - chr3L 1509812 intron,intron Psa +,cue - chr3L 1513630 intron,intron Psa +,cue - chr3L_14_1505001 chr3L_1505001 S1 966 chr3L 1684020 1684046 chr3L 1684099 1684125 13 79 7.0 7.0 7.0 1.6 105 chr3L 1684020 intron CG7991 + chr3L 1684072 intron CG7991 + chr3L 1684125 intron CG7991 + chr3L_13_1680001 chr3L_1680001 S1 967 chr3L 1688248 1688253 chr3L 1688378 1688383 4 130 3.0 0.0 1.5 1.6 135 chr3L 1688248 intron CG7991 + chr3L 1688316 intron CG7991 + chr3L 1688383 intron CG7991 + chr3L_4_1685001 chr3L_1685001 S1 968 chr3L 1740866 1740882 chr3L 1741109 1741126 pogo 6 244 1.5 6.5 4.0 1.2 260 chr3L 1740866 intron Gk + chr3L 1740996 intron Gk + chr3L 1741126 intron Gk + chr3L_6_1740001 chr3L_1740001 S1 969 chr3L 1848638 1848667 chr3L 1848717 1848746 13 78 4.0 3.5 3.8 2.7 108 chr3L 1848638 intergenic not near genes chr3L 1848692 intergenic not near genes chr3L 1848746 intergenic not near genes chr3L_13_1845001 chr3L_1845001 S1 970 chr3L 1984716 1984724 chr3L 1984796 1984804 7 80 1.0 4.0 2.5 2.0 88 chr3L 1984716 intergenic not near genes chr3L 1984760 intergenic not near genes chr3L 1984804 intergenic not near genes chr3L_7_1980001 chr3L_1980001 S1 971 chr3L 1994582 1994615 chr3L 1994664 1994697 17 82 4.0 2.0 3.0 4.2 115 chr3L 1994582 intergenic not near genes chr3L 1994640 intergenic not near genes chr3L 1994697 intergenic not near genes chr3L_17_1990001 chr3L_1990001 S1 972 chr3L 2168773 2168803 chr3L 2168865 2168895 13 92 3.5 6.5 5.0 2.2 122 chr3L 2168773 exon CG15879 - chr3L 2168834 intron CG15879 - chr3L 2168895 intron CG15879 - chr3L_13_2165001 chr3L_2165001 S1 973 chr3L 2199809 2199820 chr3L 2199886 2199897 7 77 0.0 8.5 4.2 1.3 88 chr3L 2199809 intergenic not near genes chr3L 2199853 intergenic not near genes chr3L 2199897 intergenic not near genes chr3L_7_2195001 chr3L_2195001 S1 974 chr3L 2308001 2308036 chr3L 2308108 2308143 9 107 5.0 4.5 4.8 1.6 142 chr3L 2308001 intergenic not near genes chr3L 2308072 intergenic not near genes chr3L 2308143 intergenic not near genes chr3L_9_2305001 chr3L_2305001 S1 975 chr3L 2447503 2447537 chr3L 2456660 2456694 roo 15 9157 5.5 4.0 4.8 2.6 9191 chr3L 2447503 intron CG45186 + chr3L 2452098 intron CG45186 + chr3L 2456694 intron CG45186 + chr3L_15_2450001 chr3L_2450001 S1 976 chr3L 2457904 2457939 chr3L 2460615 2460650 11 2711 3.0 6.5 4.8 1.9 2746 chr3L 2457904 intron CG45186 + chr3L 2459277 intron CG45186 + chr3L 2460650 intron CG45186 + chr3L_11_2455001 chr3L_2455001 S1 977 chr3L 2683943 2683978 chr3L 2684020 2684055 17 77 3.0 4.0 3.5 3.8 112 chr3L 2683943 intron Fife - chr3L 2683999 intron Fife - chr3L 2684055 intron Fife - chr3L_17_2680001 chr3L_2680001 S1 978 chr3L 2692160 2692174 chr3L 2692239 2692253 7 79 5.0 5.0 5.0 1.2 93 chr3L 2692160 intron Fife - chr3L 2692206 intron Fife - chr3L 2692253 intron Fife - chr3L_7_2690001 chr3L_2690001 S1 979 chr3L 2692176 2692192 chr3L 2692237 2692271 13 78 3.0 4.5 3.8 2.7 95 chr3L 2692176 intron Fife - chr3L 2692224 intron Fife - chr3L 2692271 intron Fife - chr3L_13_2690001 chr3L_2690001 S1 980 chr3L 2719536 2719559 chr3L 2719639 2719662 9 103 2.0 1.5 1.8 3.2 126 chr3L 2719536 3` UTR Mrtf - chr3L 2719599 3` UTR Mrtf - chr3L 2719662 3` UTR Mrtf - chr3L_9_2715001 chr3L_2715001 S1 981 chr3L 2751455 2751466 chr3L 2755751 2755762 F-element 4 4296 5.0 8.5 6.8 0.5 4307 chr3L 2751455 intron Mrtf - chr3L 2753608 intron Mrtf - chr3L 2755762 intron Mrtf - chr3L_4_2750001 chr3L_2750001 S1 982 chr3L 2795721 2795745 chr3L 2795845 2795869 8 124 1.5 6.0 3.8 1.7 148 chr3L 2795721 intron CG43444 - chr3L 2795795 intron CG43444 - chr3L 2795869 intron CG43444 - chr3L_8_2795001 chr3L_2795001 S1 983 chr3L 2854606 2854634 chr3L 2854684 2854712 9 78 4.0 0.0 2.0 3.0 106 chr3L 2854606 intron CG43444 - chr3L 2854659 intron CG43444 - chr3L 2854712 intron CG43444 - chr3L_9_2850001 chr3L_2850001 S1 984 chr3L 2897406 2897428 chr3L 2897513 2897535 5 107 1.0 2.5 1.8 1.8 129 chr3L 2897406 5` UTR Shab + chr3L 2897470 intron Shab + chr3L 2897535 intron Shab + chr3L_5_2895001 chr3L_2895001 S1 985 chr3L 2927839 2927867 chr3L 2936117 2936145 Tirant 6 8278 3.5 3.0 3.2 1.4 8306 chr3L 2927839 intron Shab + chr3L 2931992 intron Shab + chr3L 2936145 intron Shab + chr3L_6_2930001 chr3L_2930001 S1 986 chr3L 2980039 2980046 chr3L 2982822 2982829 4 2783 28.0 43.0 35.5 0.1 2790 chr3L 2980039 intergenic not near genes chr3L 2981434 exon CG2107 + chr3L 2982829 exon CG2107 + chr3L_4_2980001 chr3L_2980001 S1 987 chr3L 2980037 2980052 chr3L 2982831 2982835 4 2786 29.0 42.0 35.5 0.1 2798 chr3L 2980037 intergenic not near genes chr3L 2981436 exon CG2107 + chr3L 2982835 exon CG2107 + chr3L_4_2980001 chr3L_2980001 S1 988 chr3L 3027614 3027630 chr3L 3028616 3028632 5 1002 0.5 1.0 0.8 2.8 1018 chr3L 3027614 intergenic not near genes chr3L 3028123 intergenic not near genes chr3L 3028632 intergenic not near genes chr3L_5_3025001 chr3L_3025001 S1 989 chr3L 3051742 3051756 chr3L 3051985 3051999 pogo 4 243 5.5 2.5 4.0 0.8 257 chr3L 3051742 3` UTR CG32485 + chr3L 3051870 intergenic CG32485 + chr3L 3051999 intergenic CG32485 + chr3L_4_3050001 chr3L_3050001 S1 990 chr3L 3061282 3061303 chr3L 3069866 3069887 Tirant 11 8583 3.5 3.0 3.2 2.6 8605 chr3L 3061282 intron CG32486 - chr3L 3065584 intron CG32486 - chr3L 3069887 intron CG32486 - chr3L_11_3065001 chr3L_3065001 S1 991 chr3L 3140826 3140854 chr3L 3141360 3141388 6 534 4.5 5.0 4.8 1.0 562 chr3L 3140826 intron CG11537 - chr3L 3141107 intron CG11537 - chr3L 3141388 intron CG11537 - chr3L_6_3140001 chr3L_3140001 S1 992 chr3L 3281435 3281472 chr3L 3281931 3281963 Doc 5 495 3.5 3.5 3.5 1.1 528 chr3L 3281435 intron CG12017 + chr3L 3281699 intron CG12017 + chr3L 3281963 intron CG12017 + chr3L_5_3280001 chr3L_3280001 S1 993 chr3L 3284436 3284465 chr3L 3284521 3284550 14 85 1.5 2.5 2.0 4.7 114 chr3L 3284436 intron CG12017 + chr3L 3284493 intron CG12017 + chr3L 3284550 intron CG12017 + chr3L_14_3280001 chr3L_3280001 S1 994 chr3L 3306519 3306550 chr3L 3306608 3306639 6 89 0.0 3.5 1.8 2.1 120 chr3L 3306519 intron ZnT63C + chr3L 3306579 intron ZnT63C + chr3L 3306639 intron ZnT63C + chr3L_6_3305001 chr3L_3305001 S1 995 chr3L 3317533 3317566 chr3L 3317613 3317646 5 80 1.5 0.5 1.0 2.5 113 chr3L 3317533 intergenic Drsl5 +,PIG-C - chr3L 3317590 intergenic PIG-C -,Drsl5 + chr3L 3317646 intergenic PIG-C - chr3L_5_3315001 chr3L_3315001 S1 996 chr3L 3436288 3436314 chr3L 3436368 3436394 7 80 2.5 2.5 2.5 2.0 106 chr3L 3436288 intron eIF5B - chr3L 3436341 intron eIF5B - chr3L 3436394 intron eIF5B - chr3L_7_3435001 chr3L_3435001 S1 997 chr3L 3451377 3451382 chr3L 3451478 3451483 5 101 6.5 2.5 4.5 0.9 106 chr3L 3451377 intron eIF5B - chr3L 3451430 intron eIF5B - chr3L 3451483 intron eIF5B - chr3L_5_3450001 chr3L_3450001 S1 998 chr3L 3475073 3475112 chr3L 3475518 3475557 jockey 11 445 1.0 2.5 1.8 3.9 484 chr3L 3475073 intron CG42324 + chr3L 3475315 intron CG42324 + chr3L 3475557 intron CG42324 + chr3L_11_3475001 chr3L_3475001 S1 999 chr3L 3487062 3487091 chr3L 3487141 3487170 7 79 2.0 4.0 3.0 1.8 108 chr3L 3487062 intron CG42324 + chr3L 3487116 intron CG42324 + chr3L 3487170 intron CG42324 + chr3L_7_3485001 chr3L_3485001 S1 1000 chr3L 3512958 3512978 chr3L 3513039 3513059 5 81 2.5 1.5 2.0 1.7 101 chr3L 3512958 intergenic ImpE2 - chr3L 3513008 intergenic ImpE2 - chr3L 3513059 intergenic ImpE2 - chr3L_5_3510001 chr3L_3510001 S1 1001 chr3L 3601303 3601330 chr3L 3606615 3606642 copia 7 5312 2.5 4.0 3.2 1.7 5339 chr3L 3601303 intron Eip63E + chr3L 3603972 intron Eip63E + chr3L 3606642 intron Eip63E + chr3L_7_3600001 chr3L_3600001 S1 1002 chr3L 3619400 3619433 chr3L 3619495 3619528 10 95 2.0 3.5 2.8 2.6 128 chr3L 3619400 intergenic not near genes chr3L 3619464 intergenic not near genes chr3L 3619528 intergenic not near genes chr3L_10_3615001 chr3L_3615001 S1 1003 chr3L 3709447 3709466 chr3L 3709530 3709549 4 83 3.5 2.0 2.8 1.1 102 chr3L 3709447 intergenic CR45675 + chr3L 3709498 intergenic not near genes chr3L 3709549 intergenic not near genes chr3L_4_3705001 chr3L_3705001 S1 1004 chr3L 3766740 3766761 chr3L 3766827 3766848 6 87 2.0 0.5 1.2 2.7 108 chr3L 3766740 intron CG32264 - chr3L 3766794 intron CG32264 - chr3L 3766848 intron CG32264 - chr3L_6_3765001 chr3L_3765001 S1 1005 chr3L 3774340 3774362 chr3L 3774417 3774439 6 74 0.0 5.0 2.5 1.7 99 chr3L 3774340 intron CG32264 - chr3L 3774390 intron CG32264 - chr3L 3774439 intron CG32264 - chr3L_6_3770001 chr3L_3770001 S1 1006 chr3L 3797256 3797263 chr3L 3797340 3797347 4 84 2.0 4.5 3.2 1.0 91 chr3L 3797256 intron CG32264 - chr3L 3797302 intron CG32264 - chr3L 3797347 intron CG32264 - chr3L_4_3795001 chr3L_3795001 S1 1007 chr3L 3815056 3815075 chr3L 3815138 3815157 6 82 2.0 3.0 2.5 1.7 101 chr3L 3815056 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815106 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815157 intron,intron Scsalpha +,CR43932 - chr3L_6_3815001 chr3L_3815001 S1 1008 chr3L 3833739 3833758 chr3L 3833981 3834000 pogo 8 242 3.0 1.0 2.0 2.7 261 chr3L 3833739 intron enc + chr3L 3833870 intron enc + chr3L 3834000 intron enc + chr3L_8_3830001 chr3L_3830001 S1 1009 chr3L 3935825 3935842 chr3L 3935904 3935921 10 79 0.0 4.0 2.0 3.3 96 chr3L 3935825 5` UTR Eip63F-2 + chr3L 3935873 5` UTR Eip63F-2 + chr3L 3935921 5` UTR Eip63F-2 + chr3L_10_3935001 chr3L_3935001 S1 1010 chr3L 4044748 4044775 chr3L 4045045 4045072 10 297 2.5 4.5 3.5 2.2 324 chr3L 4044748 intergenic not near genes chr3L 4044910 intergenic not near genes chr3L 4045072 intergenic not near genes chr3L_10_4040001 chr3L_4040001 S1 1011 chr3L 4080487 4080493 chr3L 4080571 4080577 4 84 0.0 7.5 3.8 0.8 90 chr3L 4080487 intron Gad1 - chr3L 4080532 intron Gad1 - chr3L 4080577 intron Gad1 - chr3L_4_4080001 chr3L_4080001 S1 1012 chr3L 4298567 4298585 chr3L 4298648 4298666 7 81 8.5 4.5 6.5 0.9 99 chr3L 4298567 exon dyl - chr3L 4298616 5` UTR dyl - chr3L 4298666 5` UTR dyl - chr3L_7_4295001 chr3L_4295001 S1 1013 chr3L 4341331 4341335 chr3L 21448026 21448027 14 17106694 13.0 18.5 15.8 0.8 17106696 chr3L 4341331 intron Cip4 - chr3L 12894679 3` UTR CG14118 + chr3L 21448027 3` UTR Syx7 + chr3L_14_12890001 chr3L_12890001 S1 1014 chr3L 4521085 4521094 chr3L 4521433 4521465 5 364 3.5 1.0 2.2 1.6 380 chr3L 4521085 intron Tie - chr3L 4521275 intron Tie - chr3L 4521465 intron Tie - chr3L_5_4520001 chr3L_4520001 S1 1015 chr3L 4536359 4536393 chr3L 4536458 4536495 7 101 3.0 2.0 2.5 2.0 136 chr3L 4536359 exon CG11353 + chr3L 4536427 intron CG11353 + chr3L 4536495 intron CG11353 + chr3L_7_4535001 chr3L_4535001 S1 1016 chr3L 4607273 4607292 chr3L 4607365 4607384 6 92 4.0 4.5 4.2 1.2 111 chr3L 4607273 intron Src64B - chr3L 4607328 intron Src64B - chr3L 4607384 intron Src64B - chr3L_6_4605001 chr3L_4605001 S1 1017 chr3L 4652569 4652598 chr3L 4652653 4652682 7 84 1.5 2.0 1.8 2.5 113 chr3L 4652569 intron axo - chr3L 4652626 intron axo - chr3L 4652682 intron axo - chr3L_7_4650001 chr3L_4650001 S1 1018 chr3L 4797960 4797990 chr3L 4798041 4798071 18 81 3.0 3.0 3.0 4.5 111 chr3L 4797960 intergenic not near genes chr3L 4798016 intergenic not near genes chr3L 4798071 intergenic not near genes chr3L_18_4795001 chr3L_4795001 S1 1019 chr3L 4858303 4858337 chr3L 4858394 4858428 17 91 5.5 3.5 4.5 3.1 125 chr3L 4858303 intergenic not near genes chr3L 4858366 intergenic not near genes chr3L 4858428 intergenic not near genes chr3L_17_4855001 chr3L_4855001 S1 1020 chr3L 4901128 4901151 chr3L 4907319 4907342 diver 11 6191 7.5 6.5 7.0 1.4 6214 chr3L 4901128 intergenic CG13704 + chr3L 4904235 intergenic not near genes chr3L 4907342 intergenic not near genes chr3L_11_4900001 chr3L_4900001 S1 1021 chr3L 4990746 4990775 chr3L 4990861 4990890 15 114 6.0 4.0 5.0 2.5 144 chr3L 4990746 intron Con - chr3L 4990818 intron Con - chr3L 4990890 intron Con - chr3L_15_4990001 chr3L_4990001 S1 1022 chr3L 5034155 5034191 chr3L 5043308 5043344 roo 14 9153 3.0 1.5 2.2 4.4 9189 chr3L 5034155 intron Con - chr3L 5038750 intron Con - chr3L 5043344 intron Con - chr3L_14_5035001 chr3L_5035001 S1 1023 chr3L 5045461 5045487 chr3L 5050243 5050269 Doc 6 4782 2.5 1.5 2.0 2.0 4808 chr3L 5045461 intron Con - chr3L 5047865 intron Con - chr3L 5050269 intron Con - chr3L_6_5045001 chr3L_5045001 S1 1024 chr3L 5066305 5066314 chr3L 5066405 5066414 4 100 2.5 3.0 2.8 1.1 109 chr3L 5066305 intron Con - chr3L 5066360 intron Con - chr3L 5066414 intron Con - chr3L_4_5065001 chr3L_5065001 S1 1025 chr3L 5101209 5101231 chr3L 5101290 5101312 11 81 1.0 5.0 3.0 2.8 103 chr3L 5101209 intergenic not near genes chr3L 5101260 intergenic not near genes chr3L 5101312 intergenic not near genes chr3L_11_5100001 chr3L_5100001 S1 1026 chr3L 5103615 5103631 chr3L 5103696 5103712 7 81 2.0 0.0 1.0 3.5 97 chr3L 5103615 intergenic not near genes chr3L 5103664 intergenic not near genes chr3L 5103712 intergenic not near genes chr3L_7_5100001 chr3L_5100001 S1 1027 chr3L 5104492 5104510 chr3L 5124627 5124645 5 20135 1.5 2.5 2.0 1.7 20153 chr3L 5104492 intergenic not near genes chr3L 5114568 intergenic not near genes chr3L 5124645 intergenic not near genes chr3L_5_5110001 chr3L_5110001 S1 1028 chr3L 5228426 5228460 chr3L 5228507 5228530 15 80 4.0 4.0 4.0 3.0 104 chr3L 5228426 intron shep - chr3L 5228478 intron shep - chr3L 5228530 intron shep - chr3L_15_5225001 chr3L_5225001 S1 1029 chr3L 5261164 5261176 chr3L 5261245 5261257 4 81 4.0 1.0 2.5 1.1 93 chr3L 5261164 intron shep - chr3L 5261210 intron shep - chr3L 5261257 intron shep - chr3L_4_5260001 chr3L_5260001 S1 1030 chr3L 5271166 5271196 chr3L 5271245 5271275 5 79 0.0 0.0 0.0 5.0 109 chr3L 5271166 intron shep - chr3L 5271220 intron shep - chr3L 5271275 intron shep - chr3L_5_5270001 chr3L_5270001 S1 1031 chr3L 5327464 5327476 chr3L 5327550 5327562 4 86 4.0 0.5 2.2 1.2 98 chr3L 5327464 intergenic not near genes chr3L 5327513 intergenic not near genes chr3L 5327562 intergenic not near genes chr3L_4_5325001 chr3L_5325001 S1 1032 chr3L 5339825 5339849 chr3L 5340070 5340094 8 245 6.5 3.0 4.8 1.4 269 chr3L 5339825 intergenic not near genes chr3L 5339960 intergenic not near genes chr3L 5340094 intergenic not near genes chr3L_8_5335001 chr3L_5335001 S1 1033 chr3L 5384308 5384344 chr3L 5384389 5384425 18 81 5.5 5.0 5.2 2.9 117 chr3L 5384308 intergenic not near genes chr3L 5384366 intergenic not near genes chr3L 5384425 intergenic not near genes chr3L_18_5380001 chr3L_5380001 S1 1034 chr3L 5388200 5388222 chr3L 5388525 5388547 12 325 4.5 4.0 4.2 2.3 347 chr3L 5388200 intergenic not near genes chr3L 5388374 intergenic not near genes chr3L 5388547 intergenic not near genes chr3L_12_5385001 chr3L_5385001 S1 1035 chr3L 5426750 5426768 chr3L 5426850 5426866 10 100 2.5 1.0 1.8 3.6 116 chr3L 5426750 intron CG34391 + chr3L 5426808 intron CG34391 + chr3L 5426866 intron CG34391 + chr3L_10_5425001 chr3L_5425001 S1 1036 chr3L 5458058 5458071 chr3L 5466661 5466674 Max-element 7 8603 11.5 2.0 6.8 0.9 8616 chr3L 5458058 intergenic not near genes chr3L 5462366 intergenic not near genes chr3L 5466674 intergenic not near genes chr3L_7_5460001 chr3L_5460001 S1 1037 chr3L 5482944 5482950 chr3L 5483153 5483160 4 210 3.5 20.0 11.8 0.3 216 chr3L 5482944 exon CG4835 + chr3L 5483052 exon CG4835 + chr3L 5483160 exon CG4835 + chr3L_4_5480001 chr3L_5480001 S1 1038 chr3L 5537718 5537751 chr3L 5538061 5538088 jockey 7 342 1.0 1.5 1.2 3.2 370 chr3L 5537718 intergenic not near genes chr3L 5537903 intergenic not near genes chr3L 5538088 intergenic CG10625 - chr3L_7_5535001 chr3L_5535001 S1 1039 chr3L 5558627 5558653 chr3L 5558742 5558768 8 115 1.5 5.0 3.2 1.9 141 chr3L 5558627 intergenic not near genes chr3L 5558698 intergenic not near genes chr3L 5558768 intergenic not near genes chr3L_8_5555001 chr3L_5555001 S1 1040 chr3L 5576957 5576989 chr3L 5577040 5577072 4 83 1.0 1.0 1.0 2.0 115 chr3L 5576957 intron Msr-110 - chr3L 5577014 intron Msr-110 - chr3L 5577072 intron Msr-110 - chr3L_4_5575001 chr3L_5575001 S1 1041 chr3L 5641233 5641256 chr3L 5641312 5641335 11 78 3.0 7.0 5.0 1.8 102 chr3L 5641233 intron Blimp-1 + chr3L 5641284 intron Blimp-1 + chr3L 5641335 intron Blimp-1 + chr3L_11_5640001 chr3L_5640001 S1 1042 chr3L 5641257 5641262 chr3L 5641311 5641341 5 72 3.0 7.0 5.0 0.8 84 chr3L 5641257 intron Blimp-1 + chr3L 5641299 intron Blimp-1 + chr3L 5641341 intron Blimp-1 + chr3L_5_5640001 chr3L_5640001 S1 1043 chr3L 5838953 5838957 chr3L 5839141 5839145 4 188 2.5 5.5 4.0 0.8 192 chr3L 5838953 intron vn - chr3L 5839049 intron vn - chr3L 5839145 intron vn - chr3L_4_5835001 chr3L_5835001 S1 1044 chr3L 5854468 5854499 chr3L 5854767 5854798 6 298 6.5 7.0 6.8 0.8 330 chr3L 5854468 intergenic not near genes chr3L 5854633 intergenic not near genes chr3L 5854798 intergenic not near genes chr3L_6_5850001 chr3L_5850001 S1 1045 chr3L 5910031 5910051 chr3L 5910273 5910293 pogo 4 242 1.5 4.5 3.0 1.0 262 chr3L 5910031 intron CG13288 + chr3L 5910162 intron CG13288 + chr3L 5910293 intron CG13288 + chr3L_4_5910001 chr3L_5910001 S1 1046 chr3L 5926315 5926350 chr3L 5926506 5926541 BS 12 191 3.0 5.0 4.0 2.4 226 chr3L 5926315 intron Vap-33B + chr3L 5926428 intron Vap-33B + chr3L 5926541 intron Vap-33B + chr3L_12_5925001 chr3L_5925001 S1 1047 chr3L 5983829 5983867 chr3L 5983951 5983989 4 122 5.0 0.0 2.5 1.1 160 chr3L 5983829 3` UTR CR45439 - chr3L 5983909 intergenic CR45439 -,CR45440 - chr3L 5983989 intergenic CR45439 -,CR45440 - chr3L_4_5980001 chr3L_5980001 S1 1048 chr3L 5992592 5992621 chr3L 5992695 5992724 10 103 3.5 4.0 3.8 2.1 132 chr3L 5992592 intergenic not near genes chr3L 5992658 intergenic not near genes chr3L 5992724 intergenic not near genes chr3L_10_5990001 chr3L_5990001 S1 1049 chr3L 6001681 6001714 chr3L 6004382 6004415 jockey 5 2701 2.5 1.5 2.0 1.7 2734 chr3L 6001681 intron PVRAP + chr3L 6003048 intron PVRAP + chr3L 6004415 intron PVRAP + chr3L_5_6000001 chr3L_6000001 S1 1050 chr3L 6022330 6022349 chr3L 6022410 6022429 8 80 0.0 9.0 4.5 1.5 99 chr3L 6022330 intron PVRAP + chr3L 6022380 intron PVRAP + chr3L 6022429 intron PVRAP + chr3L_8_6020001 chr3L_6020001 S1 1051 chr3L 6040376 6040394 chr3L 6042733 6042751 Doc 6 2357 3.0 4.0 3.5 1.3 2375 chr3L 6040376 intergenic Jon65Aiv + chr3L 6041564 intergenic not near genes chr3L 6042751 intergenic not near genes chr3L_6_6040001 chr3L_6040001 S1 1052 chr3L 6052647 6052673 chr3L 6052733 6052759 15 86 12.5 13.5 13.0 1.1 112 chr3L 6052647 exon Jon65Aii + chr3L 6052703 intron Jon65Aii + chr3L 6052759 exon Jon65Aii + chr3L_15_6050001 chr3L_6050001 S1 1053 chr3L 6065017 6065034 chr3L 6065095 6065112 4 78 2.5 1.5 2.0 1.3 95 chr3L 6065017 intergenic not near genes chr3L 6065064 intergenic not near genes chr3L 6065112 intergenic not near genes chr3L_4_6065001 chr3L_6065001 S1 1054 chr3L 6183552 6183576 chr3L 6187591 6187615 18 4040 19.0 29.5 24.2 0.7 4063 chr3L 6183552 exon D19B - chr3L 6185584 exon CG43293 + chr3L 6187615 exon D19A - chr3L_18_6185001 chr3L_6185001 S1 1055 chr3L 6220913 6220948 chr3L 6230066 6230099 roo 12 9153 3.5 4.0 3.8 2.5 9186 chr3L 6220913 5` UTR pncr008:3L + chr3L 6225506 intergenic not near genes chr3L 6230099 intergenic not near genes chr3L_12_6225001 chr3L_6225001 S1 1056 chr3L 6231157 6231373 chr3L 6231239 6231460 13 84 0.5 0.5 0.5 8.7 303 chr3L 6231157 intergenic not near genes chr3L 6231308 intergenic CG13299 - chr3L 6231460 intergenic CG13299 - chr3L_13_6230001 chr3L_6230001 S1 1057 chr3L 6334651 6334688 chr3L 6334736 6334767 19 84 5.0 3.5 4.2 3.7 116 chr3L 6334651 intron CG13300 - chr3L 6334709 intron CG13300 - chr3L 6334767 intron CG13300 - chr3L_19_6330001 chr3L_6330001 S1 1058 chr3L 6335015 6335043 chr3L 6335486 6335515 297 6 472 5.5 4.5 5.0 1.0 500 chr3L 6335015 intron CG13300 - chr3L 6335265 intron CG13300 - chr3L 6335515 intron CG13300 - chr3L_6_6335001 chr3L_6335001 S1 1059 chr3L 6358627 6358645 chr3L 6358705 6358723 5 78 5.5 4.0 4.8 0.9 96 chr3L 6358627 intergenic not near genes chr3L 6358675 intergenic not near genes chr3L 6358723 intergenic not near genes chr3L_5_6355001 chr3L_6355001 S1 1060 chr3L 6405657 6405689 chr3L 6432122 6432154 roo 7 26465 1.5 2.5 2.0 2.3 26497 chr3L 6405657 intron CG42747 + chr3L 6418906 intron CG42747 + chr3L 6432154 intron CG42747 + chr3L_7_6415001 chr3L_6415001 S1 1061 chr3L 6503999 6504030 chr3L 6505583 6505598 14 1582 3.0 3.0 3.0 3.5 1599 chr3L 6503999 intron sfl + chr3L 6504798 intron sfl + chr3L 6505598 intron sfl + chr3L_14_6500001 chr3L_6500001 S1 1062 chr3L 6623479 6623506 chr3L 6623576 6623603 13 96 3.0 4.0 3.5 2.9 124 chr3L 6623479 intergenic not near genes chr3L 6623541 intergenic GluRIA + chr3L 6623603 intergenic GluRIA + chr3L_13_6620001 chr3L_6620001 S1 1063 chr3L 6781125 6781141 chr3L 6783139 6783155 Doc 8 2014 1.0 0.0 0.5 5.3 2030 chr3L 6781125 intergenic not near genes chr3L 6782140 intergenic not near genes chr3L 6783155 intergenic not near genes chr3L_8_6780001 chr3L_6780001 S1 1064 chr3L 6855930 6855955 chr3L 6860716 6860741 Doc 6 4784 5.0 4.5 4.8 1.0 4811 chr3L 6855930 intergenic not near genes chr3L 6858336 intergenic not near genes chr3L 6860741 intergenic not near genes chr3L_6_6855001 chr3L_6855001 S1 1065 chr3L 6887521 6887547 chr3L 6895007 6895040 roo 11 7492 2.5 3.0 2.8 2.9 7519 chr3L 6887521 intergenic not near genes chr3L 6891280 intergenic not near genes chr3L 6895040 intergenic not near genes chr3L_11_6890001 chr3L_6890001 S1 1066 chr3L 6942057 6942080 chr3L 6942157 6942180 4 100 2.5 2.0 2.2 1.2 123 chr3L 6942057 intergenic not near genes chr3L 6942118 intergenic not near genes chr3L 6942180 intergenic not near genes chr3L_4_6940001 chr3L_6940001 S1 1067 chr3L 6989293 6989323 chr3L 6989372 6989402 4 79 1.0 0.0 0.5 2.7 109 chr3L 6989293 intergenic not near genes chr3L 6989348 intergenic not near genes chr3L 6989402 intergenic not near genes chr3L_4_6985001 chr3L_6985001 S1 1068 chr3L 7033174 7033205 chr3L 7033254 7033286 16 80 4.5 5.0 4.8 2.8 112 chr3L 7033174 intron Mp + chr3L 7033230 intron Mp + chr3L 7033286 intron Mp + chr3L_16_7030001 chr3L_7030001 S1 1069 chr3L 7100428 7100462 chr3L 7100516 7100550 6 88 3.0 2.5 2.8 1.6 122 chr3L 7100428 intron form3 + chr3L 7100489 intron form3 + chr3L 7100550 intron form3 + chr3L_6_7100001 chr3L_7100001 S1 1070 chr3L 7150016 7150042 chr3L 7150096 7150122 6 80 0.0 3.5 1.8 2.1 106 chr3L 7150016 intron corn - chr3L 7150069 intron corn - chr3L 7150122 intron corn - chr3L_6_7150001 chr3L_7150001 S1 1071 chr3L 7187409 7187420 chr3L 7187492 7187503 4 83 0.0 0.0 0.0 4.0 94 chr3L 7187409 intron Dscam2 - chr3L 7187456 intron Dscam2 - chr3L 7187503 intron Dscam2 - chr3L_4_7185001 chr3L_7185001 S1 1072 chr3L 7201270 7201271 chr3L 21448025 21448026 8 14246755 17.5 18.0 17.8 0.4 14246756 chr3L 7201270 intergenic not near genes chr3L 14324648 intron,intron fz +,CR45025 - chr3L 21448026 3` UTR Syx7 + chr3L_8_14320001 chr3L_14320001 S1 1073 chr3L 7217922 7217939 chr3L 7218039 7218056 8 117 4.0 12.0 8.0 0.9 134 chr3L 7217922 intergenic not near genes chr3L 7217989 intergenic not near genes chr3L 7218056 intergenic not near genes chr3L_8_7215001 chr3L_7215001 S1 1074 chr3L 7259004 7259023 chr3L 7259124 7259143 5 120 5.0 1.0 3.0 1.2 139 chr3L 7259004 intron CG14830 - chr3L 7259074 intron CG14830 - chr3L 7259143 intron CG14830 - chr3L_5_7255001 chr3L_7255001 S1 1075 chr3L 7285458 7285476 chr3L 7285537 7285555 5 79 3.5 2.5 3.0 1.2 97 chr3L 7285458 intron unc-13-4A - chr3L 7285506 intron unc-13-4A - chr3L 7285555 intron unc-13-4A - chr3L_5_7285001 chr3L_7285001 S1 1076 chr3L 7288381 7288410 chr3L 7288467 7288496 6 86 0.0 3.0 1.5 2.4 115 chr3L 7288381 intron unc-13-4A - chr3L 7288438 intron unc-13-4A - chr3L 7288496 intron unc-13-4A - chr3L_6_7285001 chr3L_7285001 S1 1077 chr3L 7358294 7358325 chr3L 7359579 7359610 16 1285 19.5 34.5 27.0 0.6 1316 chr3L 7358294 exon pst - chr3L 7358952 exon pst - chr3L 7359610 intron pst - chr3L_16_7355001 chr3L_7355001 S1 1078 chr3L 7377315 7377348 chr3L 7380421 7380454 297 7 3106 3.0 7.0 5.0 1.2 3139 chr3L 7377315 intron SMSr - chr3L 7378884 intron SMSr - chr3L 7380454 intron SMSr - chr3L_7_7375001 chr3L_7375001 S1 1079 chr3L 7411676 7411703 chr3L 7411764 7411791 7 88 2.0 1.5 1.8 2.5 115 chr3L 7411676 intergenic not near genes chr3L 7411734 intergenic not near genes chr3L 7411791 intergenic not near genes chr3L_7_7410001 chr3L_7410001 S1 1080 chr3L 7496593 7496624 chr3L 7497330 7497361 7 737 2.0 1.0 1.5 2.8 768 chr3L 7496593 intergenic Cyp4d8 - chr3L 7496977 intergenic CG8539 - chr3L 7497361 3` UTR CG8539 - chr3L_7_7495001 chr3L_7495001 S1 1081 chr3L 7498757 7498773 chr3L 7503535 7503551 F-element 7 4778 4.5 3.0 3.8 1.5 4794 chr3L 7498757 5` UTR CG8539 - chr3L 7501154 intergenic not near genes chr3L 7503551 intergenic not near genes chr3L_7_7500001 chr3L_7500001 S1 1082 chr3L 7508677 7508706 chr3L 7508762 7508791 13 85 2.5 3.0 2.8 3.4 114 chr3L 7508677 intergenic not near genes chr3L 7508734 intergenic not near genes chr3L 7508791 intergenic not near genes chr3L_13_7505001 chr3L_7505001 S1 1083 chr3L 7591145 7591181 chr3L 7591237 7591252 13 89 4.5 4.5 4.5 2.4 107 chr3L 7591145 intergenic CG7716 - chr3L 7591198 intergenic CG7716 - chr3L 7591252 intergenic CG7716 - chr3L_13_7590001 chr3L_7590001 S1 1084 chr3L 7749470 7749471 chr3L 11777678 11777678 6 4028207 10.0 18.5 14.2 0.4 4028208 chr3L 7749470 intron,3` UTR CG32373 +,CG13685 + chr3L 9763574 5` UTR CG8177 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_6_9760001 chr3L_9760001 S1 1085 chr3L 7793712 7793743 chr3L 7800765 7800796 297 6 7053 3.0 2.5 2.8 1.6 7084 chr3L 7793712 intron CG32369 - chr3L 7797254 intron CG32369 - chr3L 7800796 intron CG32369 - chr3L_6_7795001 chr3L_7795001 S1 1086 chr3L 7801762 7801773 chr3L 7802002 7802013 5 240 3.0 4.5 3.8 1.0 251 chr3L 7801762 intron CG32369 - chr3L 7801888 intron CG32369 - chr3L 7802013 intron CG32369 - chr3L_5_7800001 chr3L_7800001 S1 1087 chr3L 7835415 7835448 chr3L 7835494 7835527 17 79 3.0 3.0 3.0 4.2 112 chr3L 7835415 intron Pdp1 - chr3L 7835471 intron Pdp1 - chr3L 7835527 intron Pdp1 - chr3L_17_7835001 chr3L_7835001 S1 1088 chr3L 7845385 7845403 chr3L 7845468 7845487 6 84 2.5 0.0 1.2 2.7 102 chr3L 7845385 intron Pdp1 - chr3L 7845436 intron Pdp1 - chr3L 7845487 intron Pdp1 - chr3L_6_7845001 chr3L_7845001 S1 1089 chr3L 7875034 7875065 chr3L 7876865 7876896 9 1831 8.0 15.5 11.8 0.7 1862 chr3L 7875034 intron CG32365 + chr3L 7875965 intron CG32365 + chr3L 7876896 intron CG32365 + chr3L_9_7875001 chr3L_7875001 S1 1090 chr3L 7883747 7883760 chr3L 7883905 7883918 5 158 8.5 0.5 4.5 0.9 171 chr3L 7883747 intron CG32365 + chr3L 7883832 intron CG32365 + chr3L 7883918 intron CG32365 + chr3L_5_7880001 chr3L_7880001 S1 1091 chr3L 7886533 7886544 chr3L 7889052 7889063 Stalker4 5 2519 2.5 4.5 3.5 1.1 2530 chr3L 7886533 intron CG32365 + chr3L 7887798 intron CG32365 + chr3L 7889063 intron CG32365 + chr3L_5_7885001 chr3L_7885001 S1 1092 chr3L 7916552 7916587 chr3L 7916636 7916671 9 84 1.0 2.5 1.8 3.2 119 chr3L 7916552 intergenic syd - chr3L 7916612 intergenic syd - chr3L 7916671 3` UTR syd - chr3L_9_7915001 chr3L_7915001 S1 1093 chr3L 7916832 7916861 chr3L 7926004 7926028 roo 7 9171 2.0 1.0 1.5 2.8 9196 chr3L 7916832 3` UTR syd - chr3L 7921430 intron syd - chr3L 7926028 3` UTR syd - chr3L_7_7920001 chr3L_7920001 S1 1094 chr3L 7985361 7985393 chr3L 7987690 7987722 NOF 5 2329 6.0 3.0 4.5 0.9 2361 chr3L 7985361 intron nmo + chr3L 7986542 intron nmo + chr3L 7987722 intron nmo + chr3L_5_7985001 chr3L_7985001 S1 1095 chr3L 8026499 8026513 chr3L 8026662 8026676 4 163 4.5 3.0 3.8 0.8 177 chr3L 8026499 intron nmo + chr3L 8026588 intron nmo + chr3L 8026676 intron nmo + chr3L_4_8025001 chr3L_8025001 S1 1096 chr3L 8062846 8062859 chr3L 8062926 8062935 4 79 5.0 1.0 3.0 1.0 89 chr3L 8062846 intergenic not near genes chr3L 8062890 intergenic not near genes chr3L 8062935 intergenic not near genes chr3L_4_8060001 chr3L_8060001 S1 1097 chr3L 8081423 8081449 chr3L 8081507 8081533 5 84 1.0 1.5 1.2 2.3 110 chr3L 8081423 intron Ect4 + chr3L 8081478 intron Ect4 + chr3L 8081533 intron Ect4 + chr3L_5_8080001 chr3L_8080001 S1 1098 chr3L 8149761 8149774 chr3L 8149868 8149880 4 107 0.5 0.5 0.5 2.7 119 chr3L 8149761 intron CG13676 - chr3L 8149820 intron CG13676 - chr3L 8149880 intron CG13676 - chr3L_4_8145001 chr3L_8145001 S1 1099 chr3L 8208126 8208157 chr3L 8208259 8208290 11 133 2.5 2.0 2.2 3.4 164 chr3L 8208126 intergenic not near genes chr3L 8208208 intergenic not near genes chr3L 8208290 intergenic not near genes chr3L_11_8205001 chr3L_8205001 S1 1100 chr3L 8295804 8295824 chr3L 8295963 8295983 6 159 3.0 5.5 4.2 1.2 179 chr3L 8295804 intergenic CG7201 - chr3L 8295894 intergenic not near genes chr3L 8295983 intergenic not near genes chr3L_6_8295001 chr3L_8295001 S1 1101 chr3L 8456477 8456488 chr3L 8456569 8456580 4 92 8.5 6.5 7.5 0.5 103 chr3L 8456477 intron Gug + chr3L 8456528 intron Gug + chr3L 8456580 intron Gug + chr3L_4_8455001 chr3L_8455001 S1 1102 chr3L 8481776 8481794 chr3L 8490936 8490948 roo 8 9156 6.5 6.0 6.2 1.1 9172 chr3L 8481776 intron CG43163 - chr3L 8486362 intron CG43163 - chr3L 8490948 intron CG43163 - chr3L_8_8485001 chr3L_8485001 S1 1103 chr3L 8481796 8481805 chr3L 8490934 8490964 roo 4 9154 6.0 5.5 5.8 0.6 9168 chr3L 8481796 intron CG43163 - chr3L 8486380 intron CG43163 - chr3L 8490964 intron CG43163 - chr3L_4_8485001 chr3L_8485001 S1 1104 chr3L 8497900 8497918 chr3L 8498007 8498025 8 107 3.5 2.0 2.8 2.1 125 chr3L 8497900 intron CG43163 - chr3L 8497962 intron CG43163 - chr3L 8498025 intron CG43163 - chr3L_8_8495001 chr3L_8495001 S1 1105 chr3L 8498303 8498330 chr3L 8505771 8505798 blood 9 7468 0.0 5.5 2.8 2.4 7495 chr3L 8498303 intron CG43163 - chr3L 8502050 intron CG43163 - chr3L 8505798 intron CG43163 - chr3L_9_8500001 chr3L_8500001 S1 1106 chr3L 8791276 8791298 chr3L 8796697 8796719 I-element 7 5421 8.5 5.0 6.8 0.9 5443 chr3L 8791276 exon Fhos + chr3L 8793998 intron Fhos + chr3L 8796719 intron Fhos + chr3L_7_8790001 chr3L_8790001 S1 1107 chr3L 8839739 8839748 chr3L 8839820 8839829 4 81 1.0 1.0 1.0 2.0 90 chr3L 8839739 intron dally + chr3L 8839784 intron dally + chr3L 8839829 intron dally + chr3L_4_8835001 chr3L_8835001 S1 1108 chr3L 8864567 8864586 chr3L 8865003 8865022 5 436 2.5 8.5 5.5 0.8 455 chr3L 8864567 intron dally + chr3L 8864794 intron dally + chr3L 8865022 intron dally + chr3L_5_8860001 chr3L_8860001 S1 1109 chr3L 8865027 8865032 chr3L 8865289 8865294 7 262 1.0 11.5 6.2 1.0 267 chr3L 8865027 intron dally + chr3L 8865160 intron dally + chr3L 8865294 intron dally + chr3L_7_8865001 chr3L_8865001 S1 1110 chr3L 8924433 8924461 chr3L 8924517 8924545 6 84 1.0 5.0 3.0 1.5 112 chr3L 8924433 intron Tsp66E + chr3L 8924489 intron Tsp66E + chr3L 8924545 intron Tsp66E + chr3L_6_8920001 chr3L_8920001 S1 1111 chr3L 8928623 8928654 chr3L 8928704 8928735 10 81 4.5 2.5 3.5 2.2 112 chr3L 8928623 intron Tsp66E + chr3L 8928679 intron Tsp66E + chr3L 8928735 intron Tsp66E + chr3L_10_8925001 chr3L_8925001 S1 1112 chr3L 9003946 9003977 chr3L 9004032 9004063 13 86 4.0 6.0 5.0 2.2 117 chr3L 9003946 intergenic not near genes chr3L 9004004 intergenic not near genes chr3L 9004063 intergenic not near genes chr3L_13_9000001 chr3L_9000001 S1 1113 chr3L 9076927 9076953 chr3L 9084488 9084514 412 10 7561 4.0 4.0 4.0 2.0 7587 chr3L 9076927 exon Tequila + chr3L 9080720 intron Tequila + chr3L 9084514 exon Tequila + chr3L_10_9080001 chr3L_9080001 S1 1114 chr3L 9111161 9111176 chr3L 9111238 9111253 4 77 1.0 2.5 1.8 1.4 92 chr3L 9111161 intron bol - chr3L 9111207 intron bol - chr3L 9111253 intron bol - chr3L_4_9110001 chr3L_9110001 S1 1115 chr3L 9129191 9129222 chr3L 9129272 9129303 13 81 3.0 4.5 3.8 2.7 112 chr3L 9129191 intron bol - chr3L 9129247 intron bol - chr3L 9129303 intron bol - chr3L_13_9125001 chr3L_9125001 S1 1116 chr3L 9130556 9130582 chr3L 9134318 9134344 412 5 3762 6.0 6.5 6.2 0.7 3788 chr3L 9130556 intergenic bol - chr3L 9132450 intergenic not near genes chr3L 9134344 intergenic Dhpr + chr3L_5_9130001 chr3L_9130001 S1 1117 chr3L 9164700 9164725 chr3L 9166168 9166193 hobo 5 1468 2.5 0.5 1.5 2.0 1493 chr3L 9164700 intron Rdl - chr3L 9165446 intron Rdl - chr3L 9166193 intron Rdl - chr3L_5_9165001 chr3L_9165001 S1 1118 chr3L 9219241 9219274 chr3L 9219914 9219947 jockey 20 672 5.5 7.5 6.5 2.7 706 chr3L 9219241 intergenic not near genes chr3L 9219594 intergenic not near genes chr3L 9219947 intergenic not near genes chr3L_20_9215001 chr3L_9215001 S1 1119 chr3L 9270617 9270650 chr3L 9278373 9278406 roo 6 7756 2.5 5.5 4.0 1.2 7789 chr3L 9270617 intron GluRIB + chr3L 9274512 intron GluRIB + chr3L 9278406 exon GluRIB + chr3L_6_9270001 chr3L_9270001 S1 1120 chr3L 9307795 9307795 chr3L 22908066 22908067 6 13600271 12.0 16.0 14.0 0.4 13600272 chr3L 9307795 intergenic not near genes chr3L 16107931 intron Zn72D - chr3L 22908067 intergenic not near genes chr3L_6_16105001 chr3L_16105001 S1 1121 chr3L 9307796 9307796 chr3L 22908067 22908067 4 13600271 12.5 16.0 14.2 0.3 13600271 chr3L 9307796 intergenic not near genes chr3L 16107932 intron Zn72D - chr3L 22908067 intergenic not near genes chr3L_4_16105001 chr3L_16105001 S1 1122 chr3L 9313026 9313026 chr3L 11777678 11777678 8 2464652 15.0 18.5 16.8 0.4 2464652 chr3L 9313026 intergenic not near genes chr3L 10545352 intron A2bp1 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_8_10545001 chr3L_10545001 S1 1123 chr3L 9502621 9502643 chr3L 9502702 9502724 4 81 1.5 1.5 1.5 1.6 103 chr3L 9502621 intron path - chr3L 9502672 intron path - chr3L 9502724 intron path - chr3L_4_9500001 chr3L_9500001 S1 1124 chr3L 9515532 9515553 chr3L 9515802 9515834 12 280 2.0 5.0 3.5 2.7 302 chr3L 9515532 intron CG33700 - chr3L 9515683 intron CG33700 - chr3L 9515834 intron CG33700 - chr3L_12_9515001 chr3L_9515001 S1 1125 chr3L 9526497 9526514 chr3L 9528178 9528178 Doc 4 1677 2.5 4.0 3.2 1.0 1681 chr3L 9526497 intergenic not near genes chr3L 9527338 intergenic not near genes chr3L 9528178 intergenic not near genes chr3L_4_9525001 chr3L_9525001 S1 1126 chr3L 9532492 9532509 chr3L 9532589 9532606 4 97 0.5 3.0 1.8 1.4 114 chr3L 9532492 intergenic not near genes chr3L 9532549 intergenic not near genes chr3L 9532606 intergenic not near genes chr3L_4_9530001 chr3L_9530001 S1 1127 chr3L 9533751 9533785 chr3L 9541312 9541346 412 5 7560 1.0 6.0 3.5 1.1 7595 chr3L 9533751 intergenic not near genes chr3L 9537548 intergenic not near genes chr3L 9541346 intergenic not near genes chr3L_5_9535001 chr3L_9535001 S1 1128 chr3L 9571897 9571937 chr3L 9572246 9572286 jockey 6 349 2.0 0.5 1.2 2.7 389 chr3L 9571897 intron CG42673 + chr3L 9572092 intron CG42673 + chr3L 9572286 intron CG42673 + chr3L_6_9570001 chr3L_9570001 S1 1129 chr3L 9572296 9572333 chr3L 9572376 9572413 4 80 0.5 2.0 1.2 1.8 117 chr3L 9572296 intron CG42673 + chr3L 9572354 intron CG42673 + chr3L 9572413 intron CG42673 + chr3L_4_9570001 chr3L_9570001 S1 1130 chr3L 9575903 9575940 chr3L 9580984 9581021 jockey 15 5080 5.0 3.0 4.0 3.0 5118 chr3L 9575903 intron CG42673 + chr3L 9578462 intron CG42673 + chr3L 9581021 intron CG42673 + chr3L_15_9575001 chr3L_9575001 S1 1131 chr3L 9629745 9629766 chr3L 9629822 9629840 6 76 2.0 2.0 2.0 2.0 95 chr3L 9629745 intron CG8336 + chr3L 9629792 intron CG8336 + chr3L 9629840 intron CG8336 + chr3L_6_9625001 chr3L_9625001 S1 1132 chr3L 9639280 9639314 chr3L 9639579 9639613 23 298 5.5 5.5 5.5 3.5 333 chr3L 9639280 intron,5` UTR fry -,CG18179 + chr3L 9639446 intron,exon fry -,CG18179 + chr3L 9639613 intron,exon fry -,CG18179 + chr3L_23_9635001 chr3L_9635001 S1 1133 chr3L 9689506 9689542 chr3L 9689587 9689623 14 80 1.5 7.5 4.5 2.5 117 chr3L 9689506 intron CG6767 - chr3L 9689564 intron CG6767 - chr3L 9689623 intron CG6767 - chr3L_14_9685001 chr3L_9685001 S1 1134 chr3L 9697774 9697800 chr3L 9697867 9697893 6 93 2.5 3.0 2.8 1.6 119 chr3L 9697774 intergenic not near genes chr3L 9697834 intergenic not near genes chr3L 9697893 intergenic UbcD4 + chr3L_6_9695001 chr3L_9695001 S1 1135 chr3L 9816460 9816492 chr3L 9844759 9844791 6 28299 22.0 35.0 28.5 0.2 28331 chr3L 9816460 intron CG43897 + chr3L 9830626 intron CG43897 + chr3L 9844791 exon RasGAP1 - chr3L_6_9830001 chr3L_9830001 S1 1136 chr3L 9848514 9848545 chr3L 9848591 9848622 12 77 2.0 0.0 1.0 6.0 108 chr3L 9848514 intron RasGAP1 - chr3L 9848568 intron RasGAP1 - chr3L 9848622 intron RasGAP1 - chr3L_12_9845001 chr3L_9845001 S1 1137 chr3L 9918879 9918911 chr3L 9918975 9919001 15 96 3.5 3.0 3.2 3.6 122 chr3L 9918879 intron CG34356 + chr3L 9918940 intron CG34356 + chr3L 9919001 intron CG34356 + chr3L_15_9915001 chr3L_9915001 S1 1138 chr3L 9929673 9929691 chr3L 9938453 9938471 roo 7 8780 1.5 2.0 1.8 2.5 8798 chr3L 9929673 intron CG34356 + chr3L 9934072 intron CG34356 + chr3L 9938471 intron CG34356 + chr3L_7_9930001 chr3L_9930001 S1 1139 chr3L 9951194 9951232 chr3L 9951282 9951320 14 87 3.5 1.5 2.5 4.0 126 chr3L 9951194 intron CG34356 + chr3L 9951257 intron CG34356 + chr3L 9951320 intron CG34356 + chr3L_14_9950001 chr3L_9950001 S1 1140 chr3L 10007188 10007202 chr3L 10007292 10007305 6 104 1.5 2.0 1.8 2.1 117 chr3L 10007188 intron dpr6 + chr3L 10007246 intron dpr6 + chr3L 10007305 intron dpr6 + chr3L_6_10005001 chr3L_10005001 S1 1141 chr3L 10106524 10106553 chr3L 10108768 10108797 9 2244 14.5 14.5 14.5 0.6 2273 chr3L 10106524 intron dpr6 + chr3L 10107660 intron dpr6 + chr3L 10108797 intron dpr6 + chr3L_9_10105001 chr3L_10105001 S1 1142 chr3L 10127736 10127767 chr3L 10127814 10127845 9 78 3.5 0.5 2.0 3.0 109 chr3L 10127736 intron dpr6 + chr3L 10127790 intron dpr6 + chr3L 10127845 intron dpr6 + chr3L_9_10125001 chr3L_10125001 S1 1143 chr3L 10214732 10214826 chr3L 10214820 10214929 5 91 0.0 0.0 0.0 5.0 197 chr3L 10214732 intergenic not near genes chr3L 10214830 intergenic not near genes chr3L 10214929 intergenic not near genes chr3L_5_10210001 chr3L_10210001 S1 1144 chr3L 10222741 10222774 chr3L 10222822 10222855 4 81 0.0 1.0 0.5 2.7 114 chr3L 10222741 intron scramb1 - chr3L 10222798 intron scramb1 - chr3L 10222855 intron scramb1 - chr3L_4_10220001 chr3L_10220001 S1 1145 chr3L 10250334 10250361 chr3L 10250426 10250453 7 92 0.5 4.5 2.5 2.0 119 chr3L 10250334 intergenic not near genes chr3L 10250394 intergenic not near genes chr3L 10250453 intergenic not near genes chr3L_7_10250001 chr3L_10250001 S1 1146 chr3L 10308737 10308770 chr3L 10308815 10308848 15 78 2.0 2.0 2.0 5.0 111 chr3L 10308737 intergenic not near genes chr3L 10308792 intergenic not near genes chr3L 10308848 intergenic not near genes chr3L_15_10305001 chr3L_10305001 S1 1147 chr3L 10386388 10386418 chr3L 10386466 10386496 7 78 1.5 8.0 4.8 1.2 108 chr3L 10386388 intergenic CR45245 + chr3L 10386442 intergenic CR45245 + chr3L 10386496 5` UTR CR45245 + chr3L_7_10385001 chr3L_10385001 S1 1148 chr3L 10417568 10417599 chr3L 10417646 10417677 15 77 5.0 4.5 4.8 2.6 109 chr3L 10417568 intergenic not near genes chr3L 10417622 intergenic not near genes chr3L 10417677 intergenic not near genes chr3L_15_10415001 chr3L_10415001 S1 1149 chr3L 10518581 10518610 chr3L 10518717 10518746 6 136 4.0 1.5 2.8 1.6 165 chr3L 10518581 intron A2bp1 + chr3L 10518664 intron A2bp1 + chr3L 10518746 intron A2bp1 + chr3L_6_10515001 chr3L_10515001 S1 1150 chr3L 10526635 10526649 chr3L 10526717 10526730 6 82 7.0 3.0 5.0 1.0 95 chr3L 10526635 intron A2bp1 + chr3L 10526682 intron A2bp1 + chr3L 10526730 intron A2bp1 + chr3L_6_10525001 chr3L_10525001 S1 1151 chr3L 10553102 10553124 chr3L 10553185 10553207 4 83 0.5 4.5 2.5 1.1 105 chr3L 10553102 intron A2bp1 + chr3L 10553154 intron A2bp1 + chr3L 10553207 intron A2bp1 + chr3L_4_10550001 chr3L_10550001 S1 1152 chr3L 10581952 10581981 chr3L 10582042 10582071 10 89 10.0 9.0 9.5 1.0 119 chr3L 10581952 intron A2bp1 + chr3L 10582012 intron A2bp1 + chr3L 10582071 intron A2bp1 + chr3L_10_10580001 chr3L_10580001 S1 1153 chr3L 10600455 10600467 chr3L 10600538 10600550 4 83 2.5 3.0 2.8 1.1 95 chr3L 10600455 intergenic not near genes chr3L 10600502 intergenic not near genes chr3L 10600550 intergenic not near genes chr3L_4_10600001 chr3L_10600001 S1 1154 chr3L 10645203 10645235 chr3L 10646682 10646714 14 1478 5.0 7.0 6.0 2.0 1511 chr3L 10645203 intron CG32066 - chr3L 10645958 intron CG32066 - chr3L 10646714 intron CG32066 - chr3L_14_10645001 chr3L_10645001 S1 1155 chr3L 10658076 10658203 chr3L 10658154 10658331 17 107 0.5 0.5 0.5 11.3 255 chr3L 10658076 intron CG32066 - chr3L 10658204 intron CG32066 - chr3L 10658331 intron CG32066 - chr3L_17_10655001 chr3L_10655001 S1 1156 chr3L 10705582 10705597 chr3L 10705655 10705675 6 78 3.0 5.0 4.0 1.2 93 chr3L 10705582 intergenic not near genes chr3L 10705628 intergenic not near genes chr3L 10705675 intergenic not near genes chr3L_6_10705001 chr3L_10705001 S1 1157 chr3L 10762828 10762859 chr3L 10762913 10762944 12 83 3.0 3.0 3.0 3.0 116 chr3L 10762828 intergenic not near genes chr3L 10762886 intergenic not near genes chr3L 10762944 intergenic not near genes chr3L_12_10760001 chr3L_10760001 S1 1158 chr3L 10856298 10856329 chr3L 10856560 10856591 13 262 3.5 2.0 2.8 3.4 293 chr3L 10856298 intergenic not near genes chr3L 10856444 intergenic not near genes chr3L 10856591 intergenic not near genes chr3L_13_10855001 chr3L_10855001 S1 1159 chr3L 10958217 10958240 chr3L 10958299 10958323 4 83 1.0 2.5 1.8 1.4 106 chr3L 10958217 intergenic not near genes chr3L 10958270 intergenic not near genes chr3L 10958323 intergenic not near genes chr3L_4_10955001 chr3L_10955001 S1 1160 chr3L 11018573 11018575 chr3L 11018660 11018662 4 87 1.0 2.5 1.8 1.4 89 chr3L 11018573 intergenic not near genes chr3L 11018618 intergenic not near genes chr3L 11018662 intergenic not near genes chr3L_4_11015001 chr3L_11015001 S1 1161 chr3L 11021284 11021319 chr3L 11021451 11021486 8 167 5.5 5.0 5.2 1.3 202 chr3L 11021284 intergenic not near genes chr3L 11021385 intergenic not near genes chr3L 11021486 intergenic not near genes chr3L_8_11020001 chr3L_11020001 S1 1162 chr3L 11087057 11087090 chr3L 11088846 11088880 S-element 9 1789 1.5 2.5 2.0 3.0 1823 chr3L 11087057 intron JIL-1 - chr3L 11087968 intron JIL-1 - chr3L 11088880 intron JIL-1 - chr3L_9_11085001 chr3L_11085001 S1 1163 chr3L 11105289 11105328 chr3L 11107001 11107040 X-element 9 1712 1.0 1.5 1.2 4.1 1751 chr3L 11105289 intergenic not near genes chr3L 11106164 intergenic not near genes chr3L 11107040 exon CG32073 - chr3L_9_11105001 chr3L_11105001 S1 1164 chr3L 11264466 11264489 chr3L 11271419 11271442 17.6 5 6953 3.5 6.5 5.0 0.8 6976 chr3L 11264466 intergenic not near genes chr3L 11267954 intergenic not near genes chr3L 11271442 intergenic not near genes chr3L_5_11265001 chr3L_11265001 S1 1165 chr3L 11285215 11285230 chr3L 11285367 11285382 5 152 0.5 2.5 1.5 2.0 167 chr3L 11285215 intergenic CR45404 + chr3L 11285298 intergenic CR45404 + chr3L 11285382 intergenic CR45404 + chr3L_5_11285001 chr3L_11285001 S1 1166 chr3L 11290626 11290647 chr3L 11290950 11290971 7 324 2.0 4.0 3.0 1.8 345 chr3L 11290626 intron CG6175 - chr3L 11290798 intron CG6175 - chr3L 11290971 intron CG6175 - chr3L_7_11290001 chr3L_11290001 S1 1167 chr3L 11329689 11329724 chr3L 11332895 11332930 jockey 14 3204 4.0 5.0 4.5 2.5 3241 chr3L 11329689 intergenic not near genes chr3L 11331310 intergenic not near genes chr3L 11332930 intergenic not near genes chr3L_14_11330001 chr3L_11330001 S1 1168 chr3L 11383962 11383993 chr3L 11384042 11384073 9 80 3.0 2.5 2.8 2.4 111 chr3L 11383962 intron CR42755 - chr3L 11384018 3` UTR CR42755 - chr3L 11384073 3` UTR CR42755 - chr3L_9_11380001 chr3L_11380001 S1 1169 chr3L 11397561 11397595 chr3L 11397671 11397705 16 109 3.5 7.0 5.2 2.6 144 chr3L 11397561 exon CG44362 + chr3L 11397633 exon CG44362 + chr3L 11397705 exon CG44362 + chr3L_16_11395001 chr3L_11395001 S1 1170 chr3L 11435560 11435588 chr3L 11435730 11435758 12 170 7.0 5.5 6.2 1.7 198 chr3L 11435560 intergenic CG6149 -,CR44548 + chr3L 11435659 5` UTR CR44548 + chr3L 11435758 5` UTR CR44548 + chr3L_12_11435001 chr3L_11435001 S1 1171 chr3L 11564788 11564810 chr3L 11572414 11572436 412 8 7626 5.5 13.5 9.5 0.8 7648 chr3L 11564788 exon CG33267 + chr3L 11568612 intron CG33267 + chr3L 11572436 exon CG33267 + chr3L_8_11565001 chr3L_11565001 S1 1172 chr3L 11588734 11588757 chr3L 11588891 11588914 6 157 0.5 2.0 1.2 2.7 180 chr3L 11588734 intergenic not near genes chr3L 11588824 intergenic not near genes chr3L 11588914 intergenic not near genes chr3L_6_11585001 chr3L_11585001 S1 1173 chr3L 11723081 11723096 chr3L 11727877 11727892 Doc 6 4796 4.0 4.5 4.2 1.2 4811 chr3L 11723081 3` UTR Bmcp + chr3L 11725486 intron Bmcp + chr3L 11727892 3` UTR Bmcp + chr3L_6_11725001 chr3L_11725001 S1 1174 chr3L 11744012 11744040 chr3L 11744121 11744149 13 109 4.5 0.0 2.2 4.1 137 chr3L 11744012 exon CG6024 - chr3L 11744080 intron CG6024 - chr3L 11744149 intron CG6024 - chr3L_13_11740001 chr3L_11740001 S1 1175 chr3L 11757918 11757927 chr3L 11758016 11758025 4 98 9.5 0.0 4.8 0.7 107 chr3L 11757918 intron CG6024 - chr3L 11757972 intron CG6024 - chr3L 11758025 intron CG6024 - chr3L_4_11755001 chr3L_11755001 S1 1176 chr3L 802565 802566 chr3L 11777678 11777678 5 10975112 28.0 18.5 23.2 0.2 10975113 chr3L 802565 intergenic not near genes chr3L 6290122 intergenic not near genes chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_5_6290001 chr3L_6290001 S1 1177 chr3L 7749470 7749471 chr3L 11777678 11777678 6 4028207 10.0 18.5 14.2 0.4 4028208 chr3L 7749470 intron,3` UTR CG32373 +,CG13685 + chr3L 9763574 5` UTR CG8177 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_6_9760001 chr3L_9760001 S1 1178 chr3L 9313026 9313026 chr3L 11777678 11777678 5 2464652 15.0 18.5 16.8 0.3 2464652 chr3L 9313026 intergenic not near genes chr3L 10545352 intron A2bp1 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_5_10545001 chr3L_10545001 S1 1179 chr3L 11849345 11849357 chr3L 11849446 11849458 5 101 2.0 4.0 3.0 1.2 113 chr3L 11849345 intergenic not near genes chr3L 11849402 intergenic not near genes chr3L 11849458 intergenic not near genes chr3L_5_11845001 chr3L_11845001 S1 1180 chr3L 11858822 11858834 chr3L 11858901 11858913 6 79 1.5 0.0 0.8 3.3 91 chr3L 11858822 intron CG44837 - chr3L 11858868 intron CG44837 - chr3L 11858913 intron CG44837 - chr3L_6_11855001 chr3L_11855001 S1 1181 chr3L 11864559 11864570 chr3L 11865855 11865866 pogo 6 1296 7.0 3.0 5.0 1.0 1307 chr3L 11864559 intron CG44837 - chr3L 11865212 intron CG44837 - chr3L 11865866 intron CG44837 - chr3L_6_11865001 chr3L_11865001 S1 1182 chr3L 11864571 11864584 chr3L 11865854 11865880 pogo 6 1294 4.0 3.0 3.5 1.3 1309 chr3L 11864571 intron CG44837 - chr3L 11865226 intron CG44837 - chr3L 11865880 intron CG44837 - chr3L_6_11865001 chr3L_11865001 S1 1183 chr3L 11929065 11929093 chr3L 11929172 11929200 13 107 2.0 3.5 2.8 3.4 135 chr3L 11929065 intron,intron CG44837 -,byn + chr3L 11929132 intron,intron CG44837 -,byn + chr3L 11929200 intron,intron CG44837 -,byn + chr3L_13_11925001 chr3L_11925001 S1 1184 chr3L 11943495 11943515 chr3L 11943597 11943617 9 102 1.0 4.5 2.8 2.4 122 chr3L 11943495 intergenic Rpt4R +,CG5883 - chr3L 11943556 intergenic Rpt4R +,CG5883 - chr3L 11943617 intergenic CG5883 -,Rpt4R + chr3L_9_11940001 chr3L_11940001 S1 1185 chr3L 11984564 11984589 chr3L 11984656 11984681 14 91 7.0 0.0 3.5 3.1 117 chr3L 11984564 intergenic CG6938 + chr3L 11984622 intergenic CG6938 + chr3L 11984681 intergenic CG6938 + chr3L_14_11980001 chr3L_11980001 S1 1186 chr3L 12066367 12066399 chr3L 12066605 12066637 15 238 3.5 2.5 3.0 3.8 270 chr3L 12066367 intergenic not near genes chr3L 12066502 intergenic not near genes chr3L 12066637 intergenic not near genes chr3L_15_12065001 chr3L_12065001 S1 1187 chr3L 12075423 12075441 chr3L 12075513 12075530 5 90 5.0 0.0 2.5 1.4 107 chr3L 12075423 intron Sema-5c - chr3L 12075476 intron Sema-5c - chr3L 12075530 intron Sema-5c - chr3L_5_12075001 chr3L_12075001 S1 1188 chr3L 12083924 12083955 chr3L 12084107 12084138 6 183 23.5 10.0 16.8 0.3 214 chr3L 12083924 intergenic not near genes chr3L 12084031 intergenic not near genes chr3L 12084138 intergenic not near genes chr3L_6_12080001 chr3L_12080001 S1 1189 chr3L 12304089 12304113 chr3L 12304166 12304190 10 77 4.5 3.5 4.0 2.0 101 chr3L 12304089 intergenic not near genes chr3L 12304140 intergenic not near genes chr3L 12304190 intergenic not near genes chr3L_10_12300001 chr3L_12300001 S1 1190 chr3L 12352127 12352155 chr3L 12352229 12352257 15 102 2.0 5.5 3.8 3.1 130 chr3L 12352127 intergenic not near genes chr3L 12352192 intergenic not near genes chr3L 12352257 intergenic not near genes chr3L_15_12350001 chr3L_12350001 S1 1191 chr3L 12356466 12356501 chr3L 12356618 12356653 13 152 2.0 3.5 2.8 3.4 187 chr3L 12356466 intergenic not near genes chr3L 12356560 intergenic not near genes chr3L 12356653 intergenic not near genes chr3L_13_12355001 chr3L_12355001 S1 1192 chr3L 12364272 12364285 chr3L 12366804 12366817 7 2531 5.0 0.0 2.5 2.0 2545 chr3L 12364272 intergenic not near genes chr3L 12365544 intergenic not near genes chr3L 12366817 intergenic not near genes chr3L_7_12365001 chr3L_12365001 S1 1193 chr3L 12369533 12369569 chr3L 12369624 12369660 11 91 1.0 1.5 1.2 5.0 127 chr3L 12369533 intron Ncc69 - chr3L 12369596 intron Ncc69 - chr3L 12369660 intron Ncc69 - chr3L_11_12365001 chr3L_12365001 S1 1194 chr3L 12458484 12458499 chr3L 12458583 12458598 4 99 2.0 0.0 1.0 2.0 114 chr3L 12458484 intergenic not near genes chr3L 12458541 intergenic not near genes chr3L 12458598 intergenic not near genes chr3L_4_12455001 chr3L_12455001 S1 1195 chr3L 12491706 12491711 chr3L 12491790 12491795 4 84 0.0 1.0 0.5 2.7 89 chr3L 12491706 intergenic CG10657 -,CR45682 + chr3L 12491750 intergenic CG10657 -,CR45682 + chr3L 12491795 intergenic CG10657 -,CR45682 + chr3L_4_12490001 chr3L_12490001 S1 1196 chr3L 12565412 12565443 chr3L 12565493 12565524 12 81 4.0 3.5 3.8 2.5 112 chr3L 12565412 intron sowah - chr3L 12565468 intron sowah - chr3L 12565524 intron sowah - chr3L_12_12565001 chr3L_12565001 S1 1197 chr3L 12610994 12611025 chr3L 12611241 12611272 9 247 1.5 2.0 1.8 3.2 278 chr3L 12610994 intron caup + chr3L 12611133 intron caup + chr3L 12611272 intron caup + chr3L_9_12610001 chr3L_12610001 S1 1198 chr3L 12626154 12626163 chr3L 12626264 12626273 6 110 1.0 3.0 2.0 2.0 119 chr3L 12626154 intergenic not near genes chr3L 12626214 intergenic not near genes chr3L 12626273 intergenic not near genes chr3L_6_12625001 chr3L_12625001 S1 1199 chr3L 12647948 12647975 chr3L 12648025 12648052 7 76 2.5 2.0 2.2 2.2 104 chr3L 12647948 5` UTR CR32111 + chr3L 12648000 5` UTR CR32111 + chr3L 12648052 5` UTR CR32111 + chr3L_7_12645001 chr3L_12645001 S1 1200 chr3L 12706641 12706655 chr3L 12706769 12706783 6 128 3.5 3.0 3.2 1.4 142 chr3L 12706641 intron mirr + chr3L 12706712 intron mirr + chr3L 12706783 intron mirr + chr3L_6_12705001 chr3L_12705001 S1 1201 chr3L 12829929 12829951 chr3L 12831009 12831031 4 1080 12.0 7.5 9.8 0.4 1102 chr3L 12829929 intron CG10960 - chr3L 12830480 intron CG10960 - chr3L 12831031 intron CG10960 - chr3L_4_12830001 chr3L_12830001 S1 1202 chr3L 12874925 12874963 chr3L 12877218 12877256 jockey 10 2293 1.5 2.5 2.0 3.3 2331 chr3L 12874925 intergenic not near genes chr3L 12876090 intergenic not near genes chr3L 12877256 intergenic not near genes chr3L_10_12875001 chr3L_12875001 S1 1203 chr3L 12894806 12894818 chr3L 12894885 12894897 9 79 5.5 10.0 7.8 1.0 91 chr3L 12894806 intergenic CG14118 + chr3L 12894852 intergenic CG14118 + chr3L 12894897 intergenic CG14118 + chr3L_9_12890001 chr3L_12890001 S1 1204 chr3L 12910243 12910272 chr3L 12910381 12910410 9 138 3.0 2.5 2.8 2.4 167 chr3L 12910243 intergenic not near genes chr3L 12910326 intergenic not near genes chr3L 12910410 intergenic not near genes chr3L_9_12910001 chr3L_12910001 S1 1205 chr3L 12919280 12919309 chr3L 12924754 12924759 Rt1c 12 5470 8.5 6.5 7.5 1.4 5479 chr3L 12919280 intergenic not near genes chr3L 12922020 intergenic not near genes chr3L 12924759 intergenic not near genes chr3L_12_12920001 chr3L_12920001 S1 1206 chr3L 12929730 12929740 chr3L 12930047 12930057 5 317 1.0 4.5 2.8 1.3 327 chr3L 12929730 intergenic not near genes chr3L 12929894 intergenic not near genes chr3L 12930057 intergenic not near genes chr3L_5_12925001 chr3L_12925001 S1 1207 chr3L 12955135 12955161 chr3L 12955212 12955237 15 77 1.5 2.0 1.8 5.4 102 chr3L 12955135 intergenic CG10752 - chr3L 12955186 intergenic not near genes chr3L 12955237 intergenic not near genes chr3L_15_12955001 chr3L_12955001 S1 1208 chr3L 12957785 12957820 chr3L 12962268 12962303 copia 5 4483 2.5 1.0 1.8 1.8 4518 chr3L 12957785 intergenic not near genes chr3L 12960044 intergenic not near genes chr3L 12962303 intergenic not near genes chr3L_5_12960001 chr3L_12960001 S1 1209 chr3L 12985199 12985228 chr3L 12985282 12985309 5 83 0.5 2.0 1.2 2.3 110 chr3L 12985199 intergenic not near genes chr3L 12985254 intergenic not near genes chr3L 12985309 intergenic not near genes chr3L_5_12985001 chr3L_12985001 S1 1210 chr3L 13085471 13085498 chr3L 13085572 13085599 7 101 2.5 1.0 1.8 2.5 128 chr3L 13085471 intergenic not near genes chr3L 13085535 intergenic not near genes chr3L 13085599 intergenic not near genes chr3L_7_13085001 chr3L_13085001 S1 1211 chr3L 13122516 13122543 chr3L 13122593 13122620 7 77 1.5 2.0 1.8 2.5 104 chr3L 13122516 intergenic not near genes chr3L 13122568 intergenic not near genes chr3L 13122620 intergenic not near genes chr3L_7_13120001 chr3L_13120001 S1 1212 chr3L 13159773 13159789 chr3L 13160038 13160054 5 265 1.5 7.5 4.5 0.9 281 chr3L 13159773 intergenic not near genes chr3L 13159914 intergenic not near genes chr3L 13160054 intergenic not near genes chr3L_5_13155001 chr3L_13155001 S1 1213 chr3L 13261818 13261840 chr3L 13261909 13261931 9 90 1.0 4.0 2.5 2.6 113 chr3L 13261818 intron caps + chr3L 13261874 intron caps + chr3L 13261931 intron caps + chr3L_9_13260001 chr3L_13260001 S1 1214 chr3L 13267290 13267307 chr3L 13267404 13267421 10 114 2.5 2.5 2.5 2.9 131 chr3L 13267290 intron caps + chr3L 13267356 intron caps + chr3L 13267421 intron caps + chr3L_10_13265001 chr3L_13265001 S1 1215 chr3L 13382514 13382546 chr3L 13382619 13382651 14 105 3.0 3.5 3.2 3.3 137 chr3L 13382514 intergenic ImpL1 + chr3L 13382582 intergenic ImpL1 + chr3L 13382651 intergenic ImpL1 + chr3L_14_13380001 chr3L_13380001 S1 1216 chr3L 13477014 13477034 chr3L 13477092 13477112 10 78 0.0 3.0 1.5 4.0 98 chr3L 13477014 intergenic not near genes chr3L 13477063 intergenic stv + chr3L 13477112 intergenic stv + chr3L_10_13475001 chr3L_13475001 S1 1217 chr3L 13525153 13525189 chr3L 13532950 13532986 roo 12 7797 3.5 4.0 3.8 2.5 7833 chr3L 13525153 intergenic not near genes chr3L 13529070 intergenic not near genes chr3L 13532986 intergenic not near genes chr3L_12_13525001 chr3L_13525001 S1 1218 chr3L 13629527 13629542 chr3L 13629639 13629654 9 112 7.0 8.0 7.5 1.1 127 chr3L 13629527 intron bru-3 - chr3L 13629590 intron bru-3 - chr3L 13629654 intron bru-3 - chr3L_9_13625001 chr3L_13625001 S1 1219 chr3L 13677543 13677557 chr3L 13677621 13677635 5 78 2.0 3.0 2.5 1.4 92 chr3L 13677543 intron bru-3 - chr3L 13677589 intron bru-3 - chr3L 13677635 intron bru-3 - chr3L_5_13675001 chr3L_13675001 S1 1220 chr3L 13752775 13752802 chr3L 13752873 13752900 11 98 6.0 4.5 5.2 1.8 125 chr3L 13752775 intron bru-3 - chr3L 13752838 intron bru-3 - chr3L 13752900 intron bru-3 - chr3L_11_13750001 chr3L_13750001 S1 1221 chr3L 13778318 13778326 chr3L 13778451 13778459 4 132 6.5 2.5 4.5 0.7 141 chr3L 13778318 intron bru-3 - chr3L 13778388 intron bru-3 - chr3L 13778459 intron bru-3 - chr3L_4_13775001 chr3L_13775001 S1 1222 chr3L 13804549 13804577 chr3L 13822836 13822864 roo 4 18287 2.0 5.5 3.8 0.8 18315 chr3L 13804549 intergenic not near genes chr3L 13813706 intergenic not near genes chr3L 13822864 intergenic not near genes chr3L_4_13810001 chr3L_13810001 S1 1223 chr3L 13828686 13828717 chr3L 13828763 13828794 7 77 0.0 1.5 0.8 3.9 108 chr3L 13828686 intergenic not near genes chr3L 13828740 intergenic not near genes chr3L 13828794 intergenic not near genes chr3L_7_13825001 chr3L_13825001 S1 1224 chr3L 13872165 13872194 chr3L 13872243 13872273 6 76 15.0 17.0 16.0 0.4 108 chr3L 13872165 3` UTR dysc - chr3L 13872219 3` UTR dysc - chr3L 13872273 3` UTR dysc - chr3L_6_13870001 chr3L_13870001 S1 1225 chr3L 13901572 13901601 chr3L 13901650 13901679 19 78 1.0 3.0 2.0 6.3 107 chr3L 13901572 intron dysc - chr3L 13901626 intron dysc - chr3L 13901679 intron dysc - chr3L_19_13900001 chr3L_13900001 S1 1226 chr3L 13920421 13920432 chr3L 13920502 13920513 4 81 1.0 1.5 1.2 1.8 92 chr3L 13920421 intron Rgl - chr3L 13920467 intron Rgl - chr3L 13920513 intron Rgl - chr3L_4_13920001 chr3L_13920001 S1 1227 chr3L 14036672 14036701 chr3L 14036766 14036795 10 94 4.0 0.0 2.0 3.3 123 chr3L 14036672 3` UTR,3` UTR pncr014:3L -,CG6661 + chr3L 14036734 3` UTR,3` UTR pncr014:3L -,CG6661 + chr3L 14036795 3` UTR pncr014:3L - chr3L_10_14035001 chr3L_14035001 S1 1228 chr3L 14175359 14175368 chr3L 14175508 14175517 4 149 3.0 1.5 2.2 1.2 158 chr3L 14175359 intergenic D - chr3L 14175438 intergenic D - chr3L 14175517 intergenic D - chr3L_4_14175001 chr3L_14175001 S1 1229 chr3L 14229866 14229883 chr3L 14230023 14230040 4 157 2.0 8.5 5.2 0.6 174 chr3L 14229866 intron nuf + chr3L 14229953 intron nuf + chr3L 14230040 intron nuf + chr3L_4_14225001 chr3L_14225001 S1 1230 chr3L 14236052 14236066 chr3L 14236190 14236194 5 136 2.0 3.0 2.5 1.4 142 chr3L 14236052 intergenic CG34244 - chr3L 14236123 intergenic CG34244 - chr3L 14236194 intergenic CG34244 -,CG7906 + chr3L_5_14235001 chr3L_14235001 S1 1231 chr3L 14245567 14245592 chr3L 14245662 14245687 1360 10 95 6.0 0.5 3.2 2.4 120 chr3L 14245567 3` UTR CR44561 - chr3L 14245627 3` UTR CR44561 - chr3L 14245687 3` UTR CR44561 - chr3L_10_14245001 chr3L_14245001 S1 1232 chr3L 14267371 14267399 chr3L 14271812 14271840 F-element 9 4441 3.0 1.0 2.0 3.0 4469 chr3L 14267371 intergenic not near genes chr3L 14269606 intergenic not near genes chr3L 14271840 intergenic not near genes chr3L_9_14265001 chr3L_14265001 S1 1233 chr3L 14277412 14277438 chr3L 14278035 14278053 4 621 2.5 2.0 2.2 1.2 641 chr3L 14277412 intron fz + chr3L 14277732 intron fz + chr3L 14278053 intron fz + chr3L_4_14275001 chr3L_14275001 S1 1234 chr3L 14282585 14282607 chr3L 14282666 14282688 9 81 4.5 7.5 6.0 1.3 103 chr3L 14282585 intron fz + chr3L 14282636 intron fz + chr3L 14282688 intron fz + chr3L_9_14280001 chr3L_14280001 S1 1235 chr3L 14295979 14296008 chr3L 14296466 14296495 roo 12 487 6.0 8.5 7.2 1.5 516 chr3L 14295979 intron fz + chr3L 14296237 intron fz + chr3L 14296495 intron fz + chr3L_12_14295001 chr3L_14295001 S1 1236 chr3L 14320056 14320077 chr3L 14320218 14320239 7 162 0.0 5.0 2.5 2.0 183 chr3L 14320056 intron fz + chr3L 14320148 intron fz + chr3L 14320239 intron fz + chr3L_7_14320001 chr3L_14320001 S1 1237 chr3L 14356524 14356553 chr3L 14356605 14356634 8 81 3.5 1.0 2.2 2.5 110 chr3L 14356524 intron fz + chr3L 14356579 intron fz + chr3L 14356634 intron fz + chr3L_8_14355001 chr3L_14355001 S1 1238 chr3L 14441599 14441616 chr3L 14441749 14441763 4 149 2.0 2.0 2.0 1.3 164 chr3L 14441599 intron bbg - chr3L 14441681 intron bbg - chr3L 14441763 intron bbg - chr3L_4_14440001 chr3L_14440001 S1 1239 chr3L 14444726 14444745 chr3L 14444902 14444921 6 176 2.0 5.0 3.5 1.3 195 chr3L 14444726 intron bbg - chr3L 14444824 intron bbg - chr3L 14444921 intron bbg - chr3L_6_14440001 chr3L_14440001 S1 1240 chr3L 14467129 14467157 chr3L 14467218 14467245 8 89 2.0 2.0 2.0 2.7 116 chr3L 14467129 intron bbg - chr3L 14467187 intron bbg - chr3L 14467245 intron bbg - chr3L_8_14465001 chr3L_14465001 S1 1241 chr3L 14468448 14468474 chr3L 14473655 14473681 copia 7 5207 3.5 5.5 4.5 1.3 5233 chr3L 14468448 intron bbg - chr3L 14471064 intron bbg - chr3L 14473681 intron bbg - chr3L_7_14470001 chr3L_14470001 S1 1242 chr3L 14486025 14486048 chr3L 14486096 14486130 8 81 1.5 2.0 1.8 2.9 105 chr3L 14486025 intron bbg - chr3L 14486078 intron bbg - chr3L 14486130 intron bbg - chr3L_8_14485001 chr3L_14485001 S1 1243 chr3L 14522098 14522124 chr3L 14522198 14522224 5 100 1.0 3.5 2.2 1.6 126 chr3L 14522098 intron bbg - chr3L 14522161 intron bbg - chr3L 14522224 intron bbg - chr3L_5_14520001 chr3L_14520001 S1 1244 chr3L 14603818 14603834 chr3L 14603900 14603916 6 82 1.5 3.0 2.2 1.9 98 chr3L 14603818 intergenic not near genes chr3L 14603867 intergenic not near genes chr3L 14603916 intergenic not near genes chr3L_6_14600001 chr3L_14600001 S1 1245 chr3L 14653911 14653937 chr3L 14654049 14654054 11 135 2.0 1.5 1.8 3.9 143 chr3L 14653911 intron dlp + chr3L 14653982 intron dlp + chr3L 14654054 intron dlp + chr3L_11_14650001 chr3L_14650001 S1 1246 chr3L 14741142 14741164 chr3L 14741221 14741243 6 79 3.0 4.0 3.5 1.3 101 chr3L 14741142 intron ome + chr3L 14741192 intron ome + chr3L 14741243 intron ome + chr3L_6_14740001 chr3L_14740001 S1 1247 chr3L 14839040 14839048 chr3L 14839130 14839138 4 90 1.5 0.5 1.0 2.0 98 chr3L 14839040 intron CG17839 + chr3L 14839089 intron CG17839 + chr3L 14839138 intron CG17839 + chr3L_4_14835001 chr3L_14835001 S1 1248 chr3L 14861804 14861832 chr3L 14861885 14861913 10 81 1.5 3.0 2.2 3.1 109 chr3L 14861804 intron CG17839 + chr3L 14861858 intron CG17839 + chr3L 14861913 intron CG17839 + chr3L_10_14860001 chr3L_14860001 S1 1249 chr3L 14922111 14922128 chr3L 14922220 14922237 10 109 3.0 3.0 3.0 2.5 126 chr3L 14922111 intron DCX-EMAP + chr3L 14922174 intron DCX-EMAP + chr3L 14922237 intron DCX-EMAP + chr3L_10_14920001 chr3L_14920001 S1 1250 chr3L 15085046 15085074 chr3L 15086213 15086241 1360 10 1167 3.0 2.0 2.5 2.9 1195 chr3L 15085046 intron cp309 - chr3L 15085644 intron cp309 - chr3L 15086241 intron cp309 - chr3L_10_15085001 chr3L_15085001 S1 1251 chr3L 15099566 15099595 chr3L 15099868 15099897 11 301 3.0 3.0 3.0 2.8 331 chr3L 15099566 intron CTPsyn + chr3L 15099732 intron CTPsyn + chr3L 15099897 intron CTPsyn + chr3L_11_15095001 chr3L_15095001 S1 1252 chr3L 15209066 15209091 chr3L 15209151 15209178 6 86 2.0 0.0 1.0 3.0 112 chr3L 15209066 intergenic CG6888 + chr3L 15209122 intergenic not near genes chr3L 15209178 intergenic not near genes chr3L_6_15205001 chr3L_15205001 S1 1253 chr3L 15231387 15231420 chr3L 15231480 15231514 14 92 3.5 2.5 3.0 3.5 127 chr3L 15231387 intergenic not near genes chr3L 15231450 intergenic not near genes chr3L 15231514 intergenic not near genes chr3L_14_15230001 chr3L_15230001 S1 1254 chr3L 15233552 15233577 chr3L 15233634 15233659 7 81 1.0 2.0 1.5 2.8 107 chr3L 15233552 intergenic not near genes chr3L 15233606 intergenic not near genes chr3L 15233659 intergenic not near genes chr3L_7_15230001 chr3L_15230001 S1 1255 chr3L 15257965 15257977 chr3L 15258870 15258883 4 906 0.5 5.0 2.8 1.1 918 chr3L 15257965 intergenic not near genes chr3L 15258424 intergenic not near genes chr3L 15258883 intergenic not near genes chr3L_4_15255001 chr3L_15255001 S1 1256 chr3L 15259475 15259488 chr3L 15259598 15259611 4 123 2.5 0.5 1.5 1.6 136 chr3L 15259475 intergenic not near genes chr3L 15259543 intergenic not near genes chr3L 15259611 intergenic not near genes chr3L_4_15255001 chr3L_15255001 S1 1257 chr3L 15282714 15282737 chr3L 15282845 15282868 8 131 3.0 1.0 2.0 2.7 154 chr3L 15282714 intergenic not near genes chr3L 15282791 intergenic not near genes chr3L 15282868 intergenic not near genes chr3L_8_15280001 chr3L_15280001 S1 1258 chr3L 15284564 15284592 chr3L 15284644 15284671 12 80 3.5 3.0 3.2 2.9 107 chr3L 15284564 intergenic not near genes chr3L 15284618 intergenic not near genes chr3L 15284671 intergenic not near genes chr3L_12_15280001 chr3L_15280001 S1 1259 chr3L 15295773 15295780 chr3L 15298617 15298624 gypsy5 4 2844 2.0 3.5 2.8 1.1 2851 chr3L 15295773 intergenic not near genes chr3L 15297198 intergenic not near genes chr3L 15298624 intergenic Best4 + chr3L_4_15295001 chr3L_15295001 S1 1260 chr3L 15393664 15393694 chr3L 15393867 15393897 7 203 3.5 4.5 4.0 1.4 233 chr3L 15393664 intergenic not near genes chr3L 15393780 intergenic not near genes chr3L 15393897 intergenic not near genes chr3L_7_15390001 chr3L_15390001 S1 1261 chr3L 15423760 15423782 chr3L 15426605 15426627 opus 6 2845 2.5 4.0 3.2 1.4 2867 chr3L 15423760 intergenic not near genes chr3L 15425194 intergenic not near genes chr3L 15426627 intergenic not near genes chr3L_6_15425001 chr3L_15425001 S1 1262 chr3L 15431614 15431638 chr3L 15431785 15431809 6 171 2.0 0.5 1.2 2.7 195 chr3L 15431614 intergenic not near genes chr3L 15431712 intergenic not near genes chr3L 15431809 intergenic not near genes chr3L_6_15430001 chr3L_15430001 S1 1263 chr3L 15439050 15439080 chr3L 15440097 15440127 11 1047 1.5 1.5 1.5 4.4 1077 chr3L 15439050 intergenic not near genes chr3L 15439588 intergenic not near genes chr3L 15440127 intergenic not near genes chr3L_11_15435001 chr3L_15435001 S1 1264 chr3L 15444648 15444683 chr3L 15444743 15444778 19 94 2.0 5.5 3.8 4.0 130 chr3L 15444648 intergenic not near genes chr3L 15444713 intergenic not near genes chr3L 15444778 intergenic not near genes chr3L_19_15440001 chr3L_15440001 S1 1265 chr3L 15511809 15511843 chr3L 15511951 15511985 9 142 3.0 2.5 2.8 2.4 176 chr3L 15511809 intron Eip71CD + chr3L 15511897 intron Eip71CD + chr3L 15511985 intron Eip71CD + chr3L_9_15510001 chr3L_15510001 S1 1266 chr3L 15641788 15641796 chr3L 15641874 15641882 5 86 0.0 1.0 0.5 3.3 94 chr3L 15641788 intron comm3 - chr3L 15641835 intron comm3 - chr3L 15641882 intron comm3 - chr3L_5_15640001 chr3L_15640001 S1 1267 chr3L 15643592 15643611 chr3L 15643880 15643899 13 288 3.5 2.0 2.8 3.4 307 chr3L 15643592 intron comm3 - chr3L 15643746 intron comm3 - chr3L 15643899 intron comm3 - chr3L_13_15640001 chr3L_15640001 S1 1268 chr3L 15691414 15691447 chr3L 15691497 15691530 9 83 0.5 4.0 2.2 2.8 116 chr3L 15691414 intron CG34451 - chr3L 15691472 intron CG34451 - chr3L 15691530 intron CG34451 - chr3L_9_15690001 chr3L_15690001 S1 1269 chr3L 15737378 15737400 chr3L 15737469 15737491 10 91 2.5 2.0 2.2 3.1 113 chr3L 15737378 intergenic not near genes chr3L 15737434 intergenic not near genes chr3L 15737491 intergenic not near genes chr3L_10_15735001 chr3L_15735001 S1 1270 chr3L 15768999 15769008 chr3L 15769111 15769120 4 112 1.5 0.0 0.8 2.2 121 chr3L 15768999 intergenic not near genes chr3L 15769060 intergenic not near genes chr3L 15769120 intergenic not near genes chr3L_4_15765001 chr3L_15765001 S1 1271 chr3L 15809174 15809199 chr3L 15809259 15809284 8 85 2.0 5.5 3.8 1.7 110 chr3L 15809174 intergenic CG6244 +,CG13445 + chr3L 15809229 intergenic CG13445 +,CG6244 + chr3L 15809284 intergenic CG13445 +,CG6244 + chr3L_8_15805001 chr3L_15805001 S1 1272 chr3L 15832253 15832284 chr3L 15832335 15832366 9 82 3.0 1.0 2.0 3.0 113 chr3L 15832253 intergenic CG12713 +,dbo + chr3L 15832310 intergenic CG12713 +,dbo + chr3L 15832366 intergenic CG12713 +,dbo + chr3L_9_15830001 chr3L_15830001 S1 1273 chr3L 15883206 15883223 chr3L 15883500 15883517 4 294 3.5 6.0 4.8 0.7 311 chr3L 15883206 intron pHCl - chr3L 15883362 intron pHCl - chr3L 15883517 intron pHCl - chr3L_4_15880001 chr3L_15880001 S1 1274 chr3L 15899228 15899260 chr3L 15899791 15899811 jockey 13 565 2.5 2.0 2.2 4.1 583 chr3L 15899228 intergenic pHCl - chr3L 15899520 intergenic pHCl - chr3L 15899811 intergenic sff - chr3L_13_15895001 chr3L_15895001 S1 1275 chr3L 15929194 15929228 chr3L 15938342 15938376 roo 5 9148 1.5 2.5 2.0 1.7 9182 chr3L 15929194 intron Pka-C3 - chr3L 15933785 intron Pka-C3 - chr3L 15938376 intron Pka-C3 - chr3L_5_15930001 chr3L_15930001 S1 1276 chr3L 16051207 16051224 chr3L 16051573 16051590 7 366 1.5 1.5 1.5 2.8 383 chr3L 16051207 intergenic th - chr3L 16051398 intergenic th - chr3L 16051590 intergenic Mbs + chr3L_7_16050001 chr3L_16050001 S1 1277 chr3L 16162595 16162628 chr3L 16162680 16162713 12 85 4.5 1.5 3.0 3.0 118 chr3L 16162595 intron CG5151 - chr3L 16162654 intron CG5151 - chr3L 16162713 intron CG5151 - chr3L_12_16160001 chr3L_16160001 S1 1278 chr3L 16182060 16182095 chr3L 16182181 16182216 15 121 2.5 1.5 2.0 5.0 156 chr3L 16182060 intergenic not near genes chr3L 16182138 intergenic not near genes chr3L 16182216 intergenic not near genes chr3L_15_16180001 chr3L_16180001 S1 1279 chr3L 16184102 16184137 chr3L 16188922 16188957 X-element 11 4820 2.5 4.5 3.5 2.4 4855 chr3L 16184102 intergenic not near genes chr3L 16186530 intergenic not near genes chr3L 16188957 intergenic not near genes chr3L_11_16185001 chr3L_16185001 S1 1280 chr3L 16293032 16293052 chr3L 16293268 16293288 8 234 5.0 2.5 3.8 1.7 256 chr3L 16293032 intergenic not near genes chr3L 16293160 intergenic not near genes chr3L 16293288 intergenic not near genes chr3L_8_16290001 chr3L_16290001 S1 1281 chr3L 16366769 16366795 chr3L 16366913 16366939 14 142 3.0 4.5 3.8 2.9 170 chr3L 16366769 exon Cpr72Ec - chr3L 16366854 exon Cpr72Ec - chr3L 16366939 exon Cpr72Ec - chr3L_14_16365001 chr3L_16365001 S1 1282 chr3L 16443848 16443879 chr3L 16446189 16446220 Doc 10 2341 2.0 2.5 2.2 3.1 2372 chr3L 16443848 intron,intron CG33158 +,dsx-c73A - chr3L 16445034 intron,intron CG33158 +,dsx-c73A - chr3L 16446220 intron,intron CG33158 +,dsx-c73A - chr3L_10_16445001 chr3L_16445001 S1 1283 chr3L 16457531 16457552 chr3L 16457627 16457648 5 96 3.5 5.5 4.5 0.9 117 chr3L 16457531 intron CG33158 + chr3L 16457590 intron CG33158 + chr3L 16457648 intron CG33158 + chr3L_5_16455001 chr3L_16455001 S1 1284 chr3L 16474929 16474961 chr3L 16475213 16475245 11 283 4.0 5.0 4.5 2.0 316 chr3L 16474929 intron,intron CG33158 +,aos - chr3L 16475087 intron,intron CG33158 +,aos - chr3L 16475245 intron,intron CG33158 +,aos - chr3L_11_16475001 chr3L_16475001 S1 1285 chr3L 16487454 16487478 chr3L 16487533 16487555 7 78 2.0 4.0 3.0 1.8 101 chr3L 16487454 intron CG33158 + chr3L 16487504 intron CG33158 + chr3L 16487555 intron CG33158 + chr3L_7_16485001 chr3L_16485001 S1 1286 chr3L 16493975 16494013 chr3L 16494493 16494530 jockey 10 518 3.5 5.0 4.2 1.9 555 chr3L 16493975 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494252 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494530 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_10_16490001 chr3L_16490001 S1 1287 chr3L 16503644 16503655 chr3L 16503722 16503733 4 78 3.5 2.5 3.0 1.0 89 chr3L 16503644 intron CG43373 - chr3L 16503688 intron CG43373 - chr3L 16503733 intron CG43373 - chr3L_4_16500001 chr3L_16500001 S1 1288 chr3L 16533569 16533584 chr3L 16533681 16533696 5 112 2.0 4.5 3.2 1.2 127 chr3L 16533569 intron CG43373 - chr3L 16533632 intron CG43373 - chr3L 16533696 intron CG43373 - chr3L_5_16530001 chr3L_16530001 S1 1289 chr3L 16540051 16540079 chr3L 16540140 16540168 6 89 4.0 2.5 3.2 1.4 117 chr3L 16540051 intron CG43373 - chr3L 16540110 intron CG43373 - chr3L 16540168 intron CG43373 - chr3L_6_16540001 chr3L_16540001 S1 1290 chr3L 16563230 16563250 chr3L 16563312 16563332 6 82 3.0 0.0 1.5 2.4 102 chr3L 16563230 intergenic Mipp1 - chr3L 16563281 intergenic Mipp1 - chr3L 16563332 intergenic Mipp1 - chr3L_6_16560001 chr3L_16560001 S1 1291 chr3L 16610703 16610715 chr3L 16610789 16610801 6 86 2.0 8.0 5.0 1.0 98 chr3L 16610703 3` UTR Su(P) - chr3L 16610752 exon Su(P) - chr3L 16610801 exon Su(P) - chr3L_6_16610001 chr3L_16610001 S1 1292 chr3L 16684024 16684050 chr3L 16689246 16689272 copia 6 5222 1.0 1.0 1.0 3.0 5248 chr3L 16684024 intron,intron Lasp -,CG43954 - chr3L 16686648 intron,intron Lasp -,CG43954 - chr3L 16689272 intron,intron,5` UTR Lasp -,CG43954 -,CR45179 + chr3L_6_16685001 chr3L_16685001 S1 1293 chr3L 16746822 16746853 chr3L 16746916 16746947 17 93 3.0 4.0 3.5 3.8 125 chr3L 16746822 intergenic not near genes chr3L 16746884 intergenic not near genes chr3L 16746947 intergenic not near genes chr3L_17_16745001 chr3L_16745001 S1 1294 chr3L 16786979 16786998 chr3L 16787056 16787075 6 76 0.5 6.0 3.2 1.4 96 chr3L 16786979 intergenic Int6 - chr3L 16787027 intergenic Int6 - chr3L 16787075 intergenic Int6 -,CG9674 - chr3L_6_16785001 chr3L_16785001 S1 1295 chr3L 16817873 16817905 chr3L 16818014 16818046 15 141 2.0 5.5 3.8 3.1 173 chr3L 16817873 intron,intron nudC +,CG13024 - chr3L 16817960 intron,intron nudC +,CG13024 - chr3L 16818046 intron,intron nudC +,CG13024 - chr3L_15_16815001 chr3L_16815001 S1 1296 chr3L 16830775 16830789 chr3L 16830859 16830873 5 83 3.5 1.5 2.5 1.4 98 chr3L 16830775 intergenic not near genes chr3L 16830824 intergenic not near genes chr3L 16830873 intergenic not near genes chr3L_5_16830001 chr3L_16830001 S1 1297 chr3L 16845026 16845045 chr3L 16845140 16845159 4 114 4.0 2.5 3.2 1.0 133 chr3L 16845026 intergenic CG9669 -,CG9715 +,TSG101 + chr3L 16845092 intergenic CG9669 -,CG9715 + chr3L 16845159 intergenic CG9669 -,CG9715 + chr3L_4_16845001 chr3L_16845001 S1 1298 chr3L 16867546 16867562 chr3L 16867625 16867640 5 79 6.5 2.0 4.2 1.0 94 chr3L 16867546 intron Lmpt + chr3L 16867593 intron Lmpt + chr3L 16867640 intron Lmpt + chr3L_5_16865001 chr3L_16865001 S1 1299 chr3L 16873340 16873359 chr3L 16873446 16873465 7 106 4.0 2.0 3.0 1.8 125 chr3L 16873340 intron Lmpt + chr3L 16873402 intron Lmpt + chr3L 16873465 intron Lmpt + chr3L_7_16870001 chr3L_16870001 S1 1300 chr3L 16945729 16945759 chr3L 16954883 16954913 roo 17 9154 3.0 2.5 2.8 4.5 9184 chr3L 16945729 exon Obp73a + chr3L 16950321 intergenic not near genes chr3L 16954913 5` UTR Nc73EF + chr3L_17_16950001 chr3L_16950001 S1 1301 chr3L 17026789 17026821 chr3L 17026871 17026903 11 81 2.0 2.0 2.0 3.7 114 chr3L 17026789 exon Fit2 + chr3L 17026846 3` UTR Fit2 + chr3L 17026903 3` UTR Fit2 + chr3L_11_17025001 chr3L_17025001 S1 1302 chr3L 17027165 17027188 chr3L 17027258 17027281 8 93 0.0 1.5 0.8 4.4 116 chr3L 17027165 intergenic Fit2 +,CG7730 + chr3L 17027223 intergenic Fit2 +,CG7730 + chr3L 17027281 intergenic Fit2 +,CG7730 + chr3L_8_17025001 chr3L_17025001 S1 1303 chr3L 17034931 17034955 chr3L 17035120 17035144 G2 4 189 1.0 1.5 1.2 1.8 213 chr3L 17034931 intergenic not near genes chr3L 17035038 intergenic not near genes chr3L 17035144 intergenic not near genes chr3L_4_17035001 chr3L_17035001 S1 1304 chr3L 17085002 17085034 chr3L 17094152 17094184 roo 7 9149 4.5 5.0 4.8 1.2 9182 chr3L 17085002 intron Rbp6 - chr3L 17089593 intron Rbp6 - chr3L 17094184 intron Rbp6 - chr3L_7_17085001 chr3L_17085001 S1 1305 chr3L 17120653 17120680 chr3L 17120730 17120757 8 77 4.5 2.0 3.2 1.9 104 chr3L 17120653 intron Rbp6 - chr3L 17120705 intron Rbp6 - chr3L 17120757 intron Rbp6 - chr3L_8_17120001 chr3L_17120001 S1 1306 chr3L 17122872 17122898 chr3L 17122982 17123007 12 110 4.0 4.0 4.0 2.4 135 chr3L 17122872 intron Rbp6 - chr3L 17122940 intron Rbp6 - chr3L 17123007 intron Rbp6 - chr3L_12_17120001 chr3L_17120001 S1 1307 chr3L 17149169 17149175 chr3L 17149251 17149257 4 82 5.0 0.0 2.5 1.1 88 chr3L 17149169 intron Rbp6 - chr3L 17149213 intron Rbp6 - chr3L 17149257 intron Rbp6 - chr3L_4_17145001 chr3L_17145001 S1 1308 chr3L 17190983 17191019 chr3L 17191065 17191102 11 82 3.0 3.5 3.2 2.6 119 chr3L 17190983 intron Rbp6 - chr3L 17191042 intron Rbp6 - chr3L 17191102 intron Rbp6 - chr3L_11_17190001 chr3L_17190001 S1 1309 chr3L 17237387 17237408 chr3L 17237540 17237561 7 153 3.0 1.5 2.2 2.2 174 chr3L 17237387 intron Rbp6 - chr3L 17237474 intron Rbp6 - chr3L 17237561 intron Rbp6 - chr3L_7_17235001 chr3L_17235001 S1 1310 chr3L 17264992 17265012 chr3L 17265078 17265098 8 86 3.0 1.0 2.0 2.7 106 chr3L 17264992 intergenic CG13723 + chr3L 17265045 intergenic CG13723 + chr3L 17265098 intergenic CG13723 + chr3L_8_17265001 chr3L_17265001 S1 1311 chr3L 17272239 17272266 chr3L 17272373 17272400 7 134 3.5 3.0 3.2 1.7 161 chr3L 17272239 intergenic not near genes chr3L 17272320 intergenic not near genes chr3L 17272400 intergenic not near genes chr3L_7_17270001 chr3L_17270001 S1 1312 chr3L 17284257 17284287 chr3L 17284424 17284454 19 167 4.5 4.0 4.2 3.7 197 chr3L 17284257 intergenic not near genes chr3L 17284356 intergenic not near genes chr3L 17284454 intergenic not near genes chr3L_19_17280001 chr3L_17280001 S1 1313 chr3L 17281146 17281175 chr3L 17285564 17285593 5 4418 14.5 20.5 17.5 0.3 4447 chr3L 17281146 intergenic not near genes chr3L 17283370 intergenic not near genes chr3L 17285593 intergenic not near genes chr3L_5_17280001 chr3L_17280001 S1 1314 chr3L 17331061 17331063 chr3L 17331152 17331154 4 91 3.5 2.5 3.0 1.0 93 chr3L 17331061 intergenic not near genes chr3L 17331108 intergenic not near genes chr3L 17331154 intergenic not near genes chr3L_4_17330001 chr3L_17330001 S1 1315 chr3L 17492489 17492504 chr3L 17492799 17492814 7 310 2.5 4.0 3.2 1.7 325 chr3L 17492489 intron Oatp74D + chr3L 17492652 intron Oatp74D + chr3L 17492814 intron Oatp74D + chr3L_7_17490001 chr3L_17490001 S1 1316 chr3L 17516984 17517010 chr3L 17524538 17524569 412 13 7559 1.0 4.0 2.5 3.7 7585 chr3L 17516984 intron CG7564 + chr3L 17520776 intron CG7564 + chr3L 17524569 3` UTR CG7564 + chr3L_13_17520001 chr3L_17520001 S1 1317 chr3L 17589756 17589791 chr3L 17589835 17589870 15 79 4.0 2.5 3.2 3.6 114 chr3L 17589756 intron Eip74EF - chr3L 17589813 intron Eip74EF - chr3L 17589870 intron Eip74EF - chr3L_15_17585001 chr3L_17585001 S1 1318 chr3L 17665640 17665674 chr3L 17665724 17665758 6 84 2.0 2.5 2.2 1.9 118 chr3L 17665640 intron Crtc - chr3L 17665699 intron Crtc - chr3L 17665758 intron Crtc - chr3L_6_17665001 chr3L_17665001 S1 1319 chr3L 17730852 17730880 chr3L 17738183 17738211 mdg1 10 7331 3.5 2.5 3.0 2.5 7359 chr3L 17730852 intron Ccn + chr3L 17734532 intron Ccn + chr3L 17738211 intron Ccn + chr3L_10_17730001 chr3L_17730001 S1 1320 chr3L 17791651 17791677 chr3L 17791742 17791768 7 91 3.0 2.0 2.5 2.0 117 chr3L 17791651 intergenic CG42815 -,CG42816 - chr3L 17791710 intergenic CG42815 -,CG42816 - chr3L 17791768 intergenic CG42815 -,CG42816 - chr3L_7_17790001 chr3L_17790001 S1 1321 chr3L 17799812 17799835 chr3L 17801600 17801623 S-element 8 1788 3.5 4.5 4.0 1.6 1811 chr3L 17799812 intron NUCB1 - chr3L 17800718 intron NUCB1 - chr3L 17801623 intron NUCB1 - chr3L_8_17800001 chr3L_17800001 S1 1322 chr3L 17834320 17834358 chr3L 17834485 17834523 13 165 0.5 1.5 1.0 6.5 203 chr3L 17834320 intron Grd + chr3L 17834422 intron Grd + chr3L 17834523 intron Grd + chr3L_13_17830001 chr3L_17830001 S1 1323 chr3L 17837625 17837654 chr3L 17837714 17837743 16 89 4.5 8.0 6.2 2.2 118 chr3L 17837625 exon Grd + chr3L 17837684 intron Grd + chr3L 17837743 exon Grd + chr3L_16_17835001 chr3L_17835001 S1 1324 chr3L 17918370 17918402 chr3L 17921174 17921206 opus 7 2804 2.0 3.0 2.5 2.0 2836 chr3L 17918370 intergenic not near genes chr3L 17919788 intergenic not near genes chr3L 17921206 intergenic not near genes chr3L_7_17915001 chr3L_17915001 S1 1325 chr3L 17991571 17991588 chr3L 17991650 17991667 4 79 2.5 4.0 3.2 1.0 96 chr3L 17991571 intron Eip75B - chr3L 17991619 intron Eip75B - chr3L 17991667 intron Eip75B - chr3L_4_17990001 chr3L_17990001 S1 1326 chr3L 18000671 18000708 chr3L 18000749 18000786 12 78 0.5 4.0 2.2 3.8 115 chr3L 18000671 intron Eip75B - chr3L 18000728 intron Eip75B - chr3L 18000786 intron Eip75B - chr3L_12_18000001 chr3L_18000001 S1 1327 chr3L 18011923 18011939 chr3L 18012239 18012255 5 316 2.0 4.5 3.2 1.2 332 chr3L 18011923 intron Eip75B - chr3L 18012089 intron Eip75B - chr3L 18012255 intron Eip75B - chr3L_5_18010001 chr3L_18010001 S1 1328 chr3L 18047707 18047736 chr3L 18056765 18056794 roo 10 9058 1.0 1.0 1.0 5.0 9087 chr3L 18047707 intron Eip75B - chr3L 18052250 intron Eip75B - chr3L 18056794 intron Eip75B - chr3L_10_18050001 chr3L_18050001 S1 1329 chr3L 18056812 18056826 chr3L 18056892 18056906 6 80 1.0 3.5 2.2 1.9 94 chr3L 18056812 intron Eip75B - chr3L 18056859 intron Eip75B - chr3L 18056906 intron Eip75B - chr3L_6_18055001 chr3L_18055001 S1 1330 chr3L 18092780 18092804 chr3L 18092896 18092920 13 116 3.0 0.0 1.5 5.2 140 chr3L 18092780 intron CG13698 - chr3L 18092850 intron CG13698 - chr3L 18092920 intron CG13698 - chr3L_13_18090001 chr3L_18090001 S1 1331 chr3L 18119659 18119677 chr3L 18119758 18119776 7 99 0.0 4.5 2.2 2.2 117 chr3L 18119659 intron CG7341 + chr3L 18119718 intron CG7341 + chr3L 18119776 intron CG7341 + chr3L_7_18115001 chr3L_18115001 S1 1332 chr3L 18135751 18135755 chr3L 18135832 18135836 4 81 0.0 0.5 0.2 3.3 85 chr3L 18135751 intergenic CR44669 - chr3L 18135794 3` UTR CR44669 - chr3L 18135836 3` UTR CR44669 - chr3L_4_18135001 chr3L_18135001 S1 1333 chr3L 18198929 18198930 chr3L 24821493 24821494 15 6622564 0.0 9.5 4.8 2.6 6622565 chr3L 18198929 intergenic not near genes chr3L 21510212 intron M6 + chr3L 24821494 intergenic not near genes chr3L_15_21510001 chr3L_21510001 S1 1334 chr3L 18262469 18262481 chr3L 18262553 18262565 4 84 1.5 2.0 1.8 1.4 96 chr3L 18262469 intergenic not near genes chr3L 18262517 intergenic not near genes chr3L 18262565 intergenic not near genes chr3L_4_18260001 chr3L_18260001 S1 1335 chr3L 18301350 18301380 chr3L 18301440 18301470 7 90 0.0 2.0 1.0 3.5 120 chr3L 18301350 intergenic CG13700 - chr3L 18301410 intergenic CG13700 - chr3L 18301470 intergenic CG13700 - chr3L_7_18300001 chr3L_18300001 S1 1336 chr3L 18323966 18323970 chr3L 18324048 18324060 5 87 3.5 4.0 3.8 1.0 94 chr3L 18323966 intergenic not near genes chr3L 18324013 intergenic not near genes chr3L 18324060 intergenic not near genes chr3L_5_18320001 chr3L_18320001 S1 1337 chr3L 18438295 18438318 chr3L 18438372 18438395 7 77 2.5 7.5 5.0 1.2 100 chr3L 18438295 intergenic skl - chr3L 18438345 intergenic skl - chr3L 18438395 intergenic skl - chr3L_7_18435001 chr3L_18435001 S1 1338 chr3L 18456276 18456300 chr3L 18456365 18456389 8 89 2.5 3.0 2.8 2.1 113 chr3L 18456276 intergenic CR44670 - chr3L 18456332 intergenic CR44670 - chr3L 18456389 intergenic CR44670 - chr3L_8_18455001 chr3L_18455001 S1 1339 chr3L 18464488 18464514 chr3L 18464574 18464601 5 84 2.5 3.0 2.8 1.3 113 chr3L 18464488 intergenic not near genes chr3L 18464544 intergenic not near genes chr3L 18464601 intergenic not near genes chr3L_5_18460001 chr3L_18460001 S1 1340 chr3L 18484673 18484698 chr3L 18488641 18488666 9 3973 18.5 45.5 32.0 0.3 3993 chr3L 18484673 intergenic AstC-R2 - chr3L 18486670 3` UTR AstC-R2 - chr3L 18488666 exon AstC-R2 - chr3L_9_18485001 chr3L_18485001 S1 1341 chr3L 18506133 18506151 chr3L 18509597 18509615 F-element 7 3464 1.0 1.5 1.2 3.2 3482 chr3L 18506133 intergenic not near genes chr3L 18507874 intergenic not near genes chr3L 18509615 intergenic not near genes chr3L_7_18505001 chr3L_18505001 S1 1342 chr3L 18528632 18528656 chr3L 18537794 18537818 roo 13 9161 4.0 4.0 4.0 2.6 9186 chr3L 18528632 intergenic not near genes chr3L 18533225 intergenic not near genes chr3L 18537818 intergenic not near genes chr3L_13_18530001 chr3L_18530001 S1 1343 chr3L 18593949 18593976 chr3L 18595930 18595957 Doc 13 1981 4.0 0.0 2.0 4.3 2008 chr3L 18593949 intergenic term - chr3L 18594953 intergenic not near genes chr3L 18595957 intergenic CR45389 + chr3L_13_18590001 chr3L_18590001 S1 1344 chr3L 18695955 18695979 chr3L 18696076 18696100 10 121 4.0 6.0 5.0 1.7 145 chr3L 18695955 intergenic CG6893 +,Dic4 - chr3L 18696028 intergenic Dic4 -,CG6893 + chr3L 18696100 intergenic Dic4 -,CG6893 + chr3L_10_18695001 chr3L_18695001 S1 1345 chr3L 18721776 18721800 chr3L 18721867 18721892 4 92 3.0 1.0 2.0 1.3 116 chr3L 18721776 intergenic CG12477 - chr3L 18721834 intergenic CG12477 - chr3L 18721892 3` UTR CG12477 - chr3L_4_18720001 chr3L_18720001 S1 1346 chr3L 18738661 18738698 chr3L 18738750 18738787 15 89 2.5 0.5 1.5 6.0 126 chr3L 18738661 intergenic not near genes chr3L 18738724 intergenic not near genes chr3L 18738787 intergenic not near genes chr3L_15_18735001 chr3L_18735001 S1 1347 chr3L 18753551 18753561 chr3L 18753634 18753644 4 83 0.5 4.0 2.2 1.2 93 chr3L 18753551 intron ftz-f1 - chr3L 18753598 intron ftz-f1 - chr3L 18753644 intron ftz-f1 - chr3L_4_18750001 chr3L_18750001 S1 1348 chr3L 18770646 18770671 chr3L 18770732 18770757 5 86 2.5 1.0 1.8 1.8 111 chr3L 18770646 intron ftz-f1 - chr3L 18770702 intron ftz-f1 - chr3L 18770757 intron ftz-f1 - chr3L_5_18770001 chr3L_18770001 S1 1349 chr3L 18772408 18772440 chr3L 18781090 18781122 roo 11 8682 2.5 2.5 2.5 3.1 8714 chr3L 18772408 intron ftz-f1 - chr3L 18776765 intron ftz-f1 - chr3L 18781122 intron ftz-f1 - chr3L_11_18775001 chr3L_18775001 S1 1350 chr3L 18797312 18797337 chr3L 18797396 18797421 6 85 1.0 4.0 2.5 1.7 109 chr3L 18797312 intron ftz-f1 - chr3L 18797366 intron ftz-f1 - chr3L 18797421 intron ftz-f1 - chr3L_6_18795001 chr3L_18795001 S1 1351 chr3L 18843864 18843882 chr3L 18843963 18843981 5 99 4.5 1.0 2.8 1.3 117 chr3L 18843864 intron Indy - chr3L 18843922 intron Indy - chr3L 18843981 intron Indy - chr3L_5_18840001 chr3L_18840001 S1 1352 chr3L 18924484 18924500 chr3L 18924561 18924577 5 77 3.0 0.5 1.8 1.8 93 chr3L 18924484 intron CG32204 - chr3L 18924530 intron CG32204 - chr3L 18924577 intron CG32204 - chr3L_5_18920001 chr3L_18920001 S1 1353 chr3L 18932350 18932373 chr3L 18932483 18932506 5 133 4.0 2.0 3.0 1.2 156 chr3L 18932350 intron CG32204 - chr3L 18932428 intron CG32204 - chr3L 18932506 intron CG32204 - chr3L_5_18930001 chr3L_18930001 S1 1354 chr3L 18933623 18933657 chr3L 18933718 18933751 6 95 2.0 1.0 1.5 2.4 128 chr3L 18933623 intron CG32204 - chr3L 18933687 intron CG32204 - chr3L 18933751 intron CG32204 - chr3L_6_18930001 chr3L_18930001 S1 1355 chr3L 18935137 18935158 chr3L 18935226 18935247 8 89 4.5 1.5 3.0 2.0 110 chr3L 18935137 intron CG32204 - chr3L 18935192 intron CG32204 - chr3L 18935247 intron CG32204 - chr3L_8_18935001 chr3L_18935001 S1 1356 chr3L 18941685 18941726 chr3L 18941779 18941820 18 94 1.5 2.5 2.0 6.0 135 chr3L 18941685 intron CG32204 - chr3L 18941752 intron CG32204 - chr3L 18941820 intron CG32204 - chr3L_18_18940001 chr3L_18940001 S1 1357 chr3L 18969594 18969620 chr3L 18969691 18969717 10 96 5.0 5.0 5.0 1.7 123 chr3L 18969594 intergenic not near genes chr3L 18969656 intergenic not near genes chr3L 18969717 intergenic not near genes chr3L_10_18965001 chr3L_18965001 S1 1358 chr3L 19008834 19008873 chr3L 19009174 19009212 jockey 5 339 1.0 1.0 1.0 2.5 378 chr3L 19008834 intron nkd - chr3L 19009023 intron nkd - chr3L 19009212 intron nkd - chr3L_5_19005001 chr3L_19005001 S1 1359 chr3L 19078341 19078366 chr3L 19080006 19080031 10 1665 16.5 30.0 23.2 0.4 1690 chr3L 19078341 intron Mkp3 - chr3L 19079186 intron Mkp3 - chr3L 19080031 intron Mkp3 - chr3L_10_19075001 chr3L_19075001 S1 1360 chr3L 19115632 19115667 chr3L 19115813 19115848 BS 11 181 2.0 3.5 2.8 2.9 216 chr3L 19115632 intron CG14082 - chr3L 19115740 intron CG14082 - chr3L 19115848 intron CG14082 - chr3L_11_19115001 chr3L_19115001 S1 1361 chr3L 19117051 19117072 chr3L 19124499 19124520 mdg1 6 7448 9.5 5.0 7.2 0.7 7469 chr3L 19117051 intron CG14082 - chr3L 19120786 intron CG14082 - chr3L 19124520 intron CG14082 - chr3L_6_19120001 chr3L_19120001 S1 1362 chr3L 19208065 19208090 chr3L 19209435 19209465 Doc 7 1374 4.0 3.0 3.5 1.6 1400 chr3L 19208065 intron fz2 - chr3L 19208765 intron fz2 - chr3L 19209465 intron fz2 - chr3L_7_19205001 chr3L_19205001 S1 1363 chr3L 19220636 19220636 chr3L 22908066 22908066 8 3687430 24.0 16.0 20.0 0.4 3687430 chr3L 19220636 intron fz2 - chr3L 21064351 intron siz + chr3L 22908066 intergenic not near genes chr3L_8_21060001 chr3L_21060001 S1 1364 chr3L 9307795 9307796 chr3L 19220637 19220637 5 9912841 12.5 24.5 18.5 0.3 9912842 chr3L 9307795 intergenic not near genes chr3L 14264216 intergenic not near genes chr3L 19220637 intron fz2 - chr3L_5_14260001 chr3L_14260001 S1 1365 chr3L 19220637 19220637 chr3L 22908067 22908067 6 3687430 24.0 16.0 20.0 0.3 3687430 chr3L 19220637 intron fz2 - chr3L 21064352 intron siz + chr3L 22908067 intergenic not near genes chr3L_6_21060001 chr3L_21060001 S1 1366 chr3L 19248851 19248876 chr3L 19248942 19248967 6 91 4.0 2.0 3.0 1.5 116 chr3L 19248851 intergenic not near genes chr3L 19248909 intergenic not near genes chr3L 19248967 intergenic not near genes chr3L_6_19245001 chr3L_19245001 S1 1367 chr3L 19269815 19269845 chr3L 19270020 19270050 9 205 1.0 3.0 2.0 3.0 235 chr3L 19269815 intron,exon CG14085 +,CG14088 - chr3L 19269932 intron,exon CG14085 +,CG14088 - chr3L 19270050 intron,exon CG14085 +,CG14088 - chr3L_9_19265001 chr3L_19265001 S1 1368 chr3L 19369841 19369870 chr3L 19369924 19369953 12 83 2.5 4.0 3.2 2.9 112 chr3L 19369841 intron CG32206 - chr3L 19369897 intron CG32206 - chr3L 19369953 intron CG32206 - chr3L_12_19365001 chr3L_19365001 S1 1369 chr3L 19386482 19386512 chr3L 19386587 19386617 6 105 1.5 3.0 2.2 1.9 135 chr3L 19386482 intron CG32206 - chr3L 19386550 intron CG32206 - chr3L 19386617 intron CG32206 - chr3L_6_19385001 chr3L_19385001 S1 1370 chr3L 19409897 19409898 chr3L 21448026 21448026 4 2038128 3.0 18.5 10.8 0.3 2038129 chr3L 19409897 intron CG32206 - chr3L 20428962 exon CG5262 - chr3L 21448026 3` UTR Syx7 + chr3L_4_20425001 chr3L_20425001 S1 1371 chr3L 19411245 19411266 chr3L 19411319 19411347 6 81 2.5 1.0 1.8 2.1 102 chr3L 19411245 intron CG32206 - chr3L 19411296 intron CG32206 - chr3L 19411347 intron CG32206 - chr3L_6_19410001 chr3L_19410001 S1 1372 chr3L 19417807 19417834 chr3L 19417888 19417915 10 81 2.0 5.5 3.8 2.1 108 chr3L 19417807 intergenic not near genes chr3L 19417861 intergenic not near genes chr3L 19417915 intergenic not near genes chr3L_10_19415001 chr3L_19415001 S1 1373 chr3L 19426754 19426777 chr3L 19426826 19426844 12 76 5.0 2.5 3.8 2.5 90 chr3L 19426754 intergenic not near genes chr3L 19426799 intergenic not near genes chr3L 19426844 intergenic not near genes chr3L_12_19425001 chr3L_19425001 S1 1374 chr3L 19513388 19513421 chr3L 19513468 19513500 8 80 2.0 1.5 1.8 2.9 112 chr3L 19513388 intergenic not near genes chr3L 19513444 intergenic not near genes chr3L 19513500 intergenic not near genes chr3L_8_19510001 chr3L_19510001 S1 1375 chr3L 19554819 19554851 chr3L 19554915 19554946 5 95 2.5 3.0 2.8 1.3 127 chr3L 19554819 intergenic CG9300 + chr3L 19554882 intergenic CG9300 + chr3L 19554946 intergenic CG9300 + chr3L_5_19550001 chr3L_19550001 S1 1376 chr3L 19848505 19848535 chr3L 19857696 19857725 roo 8 9191 2.5 4.0 3.2 1.9 9220 chr3L 19848505 intron Papss + chr3L 19853115 intron Papss + chr3L 19857725 intron Papss + chr3L_8_19850001 chr3L_19850001 S1 1377 chr3L 19899735 19899746 chr3L 19900141 19900148 5 406 9.5 4.5 7.0 0.6 413 chr3L 19899735 intron,intron Mi-2 -,Su(Tpl) - chr3L 19899942 intron,intron Mi-2 -,Su(Tpl) - chr3L 19900148 intron,intron Mi-2 -,Su(Tpl) - chr3L_5_19895001 chr3L_19895001 S1 1378 chr3L 19899747 19899751 chr3L 19900138 19900159 6 403 8.5 4.0 6.2 0.8 412 chr3L 19899747 intron,intron Mi-2 -,Su(Tpl) - chr3L 19899953 intron,intron Mi-2 -,Su(Tpl) - chr3L 19900159 intron,intron Mi-2 -,Su(Tpl) - chr3L_6_19895001 chr3L_19895001 S1 1379 chr3L 19961279 19961295 chr3L 19961491 19961507 5 212 5.0 3.5 4.2 1.0 228 chr3L 19961279 intron Ac76E + chr3L 19961393 intron Ac76E + chr3L 19961507 intron Ac76E + chr3L_5_19960001 chr3L_19960001 S1 1380 chr3L 19981209 19981235 chr3L 19981290 19981316 9 81 1.5 2.5 2.0 3.0 107 chr3L 19981209 intergenic CG17732 + chr3L 19981262 intergenic CG17732 + chr3L 19981316 intergenic CG17732 + chr3L_9_19980001 chr3L_19980001 S1 1381 chr3L 20009659 20009696 chr3L 20009881 20009918 16 222 3.0 1.5 2.2 5.0 259 chr3L 20009659 exon kug + chr3L 20009788 exon kug + chr3L 20009918 exon kug + chr3L_16_20005001 chr3L_20005001 S1 1382 chr3L 20086784 20086819 chr3L 20086863 20086898 5 79 1.0 0.0 0.5 3.3 114 chr3L 20086784 intron sNPF-R - chr3L 20086841 intron sNPF-R - chr3L 20086898 intron sNPF-R - chr3L_5_20085001 chr3L_20085001 S1 1383 chr3L 20113663 20113690 chr3L 20122921 20122948 roo 4 9258 2.5 3.0 2.8 1.1 9285 chr3L 20113663 intergenic not near genes chr3L 20118306 intergenic not near genes chr3L 20122948 intergenic not near genes chr3L_4_20115001 chr3L_20115001 S1 1384 chr3L 20143085 20143111 chr3L 20143166 20143192 6 81 2.5 2.5 2.5 1.7 107 chr3L 20143085 intergenic not near genes chr3L 20143138 intergenic not near genes chr3L 20143192 intergenic not near genes chr3L_6_20140001 chr3L_20140001 S1 1385 chr3L 20177239 20177277 chr3L 20177329 20177352 19 89 4.0 6.0 5.0 3.2 113 chr3L 20177239 intron CG42674 - chr3L 20177296 intron CG42674 - chr3L 20177352 intron CG42674 - chr3L_19_20175001 chr3L_20175001 S1 1386 chr3L 20257337 20257356 chr3L 20258454 20258473 pogo 7 1117 7.5 4.0 5.8 1.0 1136 chr3L 20257337 intron rdgC + chr3L 20257905 intron rdgC + chr3L 20258473 intron rdgC + chr3L_7_20255001 chr3L_20255001 S1 1387 chr3L 20290315 20290343 chr3L 20290401 20290429 12 86 4.0 3.0 3.5 2.7 114 chr3L 20290315 intron gogo - chr3L 20290372 intron gogo - chr3L 20290429 intron gogo - chr3L_12_20290001 chr3L_20290001 S1 1388 chr3L 20423010 20423041 chr3L 20423226 20423257 18 214 7.0 4.5 5.8 2.6 247 chr3L 20423010 exon zye + chr3L 20423134 exon zye + chr3L 20423257 exon zye + chr3L_18_20420001 chr3L_20420001 S1 1389 chr3L 20462587 20462601 chr3L 20462668 20462683 10 82 1.0 2.0 1.5 4.0 96 chr3L 20462587 intron atk - chr3L 20462635 intron atk - chr3L 20462683 intron atk - chr3L_10_20460001 chr3L_20460001 S1 1390 chr3L 20476754 20476784 chr3L 20484354 20484384 springer 7 7600 3.0 7.5 5.2 1.1 7630 chr3L 20476754 3` UTR isoQC + chr3L 20480569 intergenic not near genes chr3L 20484384 3` UTR ZnT77C - chr3L_7_20480001 chr3L_20480001 S1 1391 chr3L 20487665 20487674 chr3L 20488117 20488126 INE-1 6 452 5.0 2.5 3.8 1.2 461 chr3L 20487665 intron ZnT77C - chr3L 20487896 intron ZnT77C - chr3L 20488126 intron ZnT77C - chr3L_6_20485001 chr3L_20485001 S1 1392 chr3L 20590067 20590092 chr3L 20590607 20590632 412 6 540 3.0 6.5 4.8 1.0 565 chr3L 20590067 intergenic not near genes chr3L 20590350 intergenic not near genes chr3L 20590632 intergenic not near genes chr3L_6_20590001 chr3L_20590001 S1 1393 chr3L 20721437 20721460 chr3L 20721557 20721580 6 120 2.0 1.5 1.8 2.1 143 chr3L 20721437 intergenic not near genes chr3L 20721508 intergenic not near genes chr3L 20721580 intergenic not near genes chr3L_6_20720001 chr3L_20720001 S1 1394 chr3L 20826358 20826392 chr3L 20826550 20826584 18 192 2.0 4.0 3.0 4.5 226 chr3L 20826358 intron Pka-R1 + chr3L 20826471 intron Pka-R1 + chr3L 20826584 intron Pka-R1 + chr3L_18_20825001 chr3L_20825001 S1 1395 chr3L 20849270 20849289 chr3L 20849350 20849369 8 80 4.0 5.0 4.5 1.5 99 chr3L 20849270 intron CG32432 - chr3L 20849320 intron CG32432 - chr3L 20849369 intron CG32432 - chr3L_8_20845001 chr3L_20845001 S1 1396 chr3L 20886823 20886833 chr3L 20886900 20886910 4 77 6.0 0.0 3.0 1.0 87 chr3L 20886823 intergenic CR44686 - chr3L 20886866 intergenic CR44686 - chr3L 20886910 intergenic CR44686 - chr3L_4_20885001 chr3L_20885001 S1 1397 chr3L 20913746 20913776 chr3L 20913829 20913859 13 82 2.5 3.0 2.8 3.4 113 chr3L 20913746 intergenic CR43930 - chr3L 20913802 intergenic CR43930 - chr3L 20913859 intergenic CR43930 - chr3L_13_20910001 chr3L_20910001 S1 1398 chr3L 21014912 21014948 chr3L 21023394 21023430 Tirant 18 8481 3.5 5.5 4.5 3.3 8518 chr3L 21014912 intron skd - chr3L 21019171 intron skd - chr3L 21023430 intron skd - chr3L_18_21015001 chr3L_21015001 S1 1399 chr3L 21079813 21079818 chr3L 21079959 21079964 5 146 0.0 4.0 2.0 1.7 151 chr3L 21079813 intron ko - chr3L 21079888 intron ko - chr3L 21079964 intron ko - chr3L_5_21075001 chr3L_21075001 S1 1400 chr3L 21093778 21093813 chr3L 21093892 21093927 12 114 1.5 1.5 1.5 4.8 149 chr3L 21093778 intron ko - chr3L 21093852 intron ko - chr3L 21093927 intron ko - chr3L_12_21090001 chr3L_21090001 S1 1401 chr3L 21151864 21151893 chr3L 21156949 21156978 flea 8 5085 5.0 3.0 4.0 1.6 5114 chr3L 21151864 intron Ac78C - chr3L 21154421 intron Ac78C - chr3L 21156978 intron Ac78C - chr3L_8_21150001 chr3L_21150001 S1 1402 chr3L 21243747 21243765 chr3L 21251311 21251329 412 6 7563 4.5 7.5 6.0 0.9 7582 chr3L 21243747 intron Eip78C + chr3L 21247538 intron Eip78C + chr3L 21251329 intron Eip78C + chr3L_6_21245001 chr3L_21245001 S1 1403 chr3L 21306151 21306165 chr3L 21315311 21315324 roo 4 9160 5.5 1.0 3.2 1.0 9173 chr3L 21306151 3` UTR,3` UTR CG7632 +,Pc - chr3L 21310738 intron Pc - chr3L 21315324 3` UTR Pc - chr3L_4_21310001 chr3L_21310001 S1 1404 chr3L 21372731 21372752 chr3L 21379240 21379261 McClintock 6 6509 2.5 2.5 2.5 1.7 6530 chr3L 21372731 intergenic not near genes chr3L 21375996 intergenic not near genes chr3L 21379261 intergenic not near genes chr3L_6_21375001 chr3L_21375001 S1 1405 chr3L 21406993 21407023 chr3L 21407073 21407103 10 80 3.5 0.5 2.0 3.3 110 chr3L 21406993 intron rgn + chr3L 21407048 intron rgn + chr3L 21407103 intron rgn + chr3L_10_21405001 chr3L_21405001 S1 1406 chr3L 4341331 4341333 chr3L 21448026 21448026 14 17106694 13.0 18.5 15.8 0.8 17106695 chr3L 4341331 intron Cip4 - chr3L 12894678 3` UTR CG14118 + chr3L 21448026 3` UTR Syx7 + chr3L_14_12890001 chr3L_12890001 S1 1407 chr3L 4341333 4341333 chr3L 21448027 21448027 5 17106694 13.0 18.0 15.5 0.3 17106694 chr3L 4341333 intron Cip4 - chr3L 12894680 3` UTR CG14118 + chr3L 21448027 3` UTR Syx7 + chr3L_5_12890001 chr3L_12890001 S1 1408 chr3L 7201270 7201270 chr3L 21448027 21448027 8 14246757 17.0 18.0 17.5 0.4 14246757 chr3L 7201270 intergenic not near genes chr3L 14324648 intron,intron fz +,CR45025 - chr3L 21448027 3` UTR Syx7 + chr3L_8_14320001 chr3L_14320001 S1 1409 chr3L 21459864 21459886 chr3L 21459943 21459965 6 79 3.0 3.5 3.2 1.4 101 chr3L 21459864 intergenic not near genes chr3L 21459914 intergenic not near genes chr3L 21459965 intergenic not near genes chr3L_6_21455001 chr3L_21455001 S1 1410 chr3L 21498835 21498868 chr3L 21500471 21500503 1360 6 1636 4.5 3.5 4.0 1.2 1668 chr3L 21498835 intron Glg1 - chr3L 21499669 intron Glg1 - chr3L 21500503 intron Glg1 - chr3L_6_21495001 chr3L_21495001 S1 1411 chr3L 21649776 21649803 chr3L 21650001 21650028 8 225 4.5 2.0 3.2 1.9 252 chr3L 21649776 intron CG43980 + chr3L 21649902 intron CG43980 + chr3L 21650028 intron CG43980 + chr3L_8_21645001 chr3L_21645001 S1 1412 chr3L 21699257 21699284 chr3L 21699539 21699566 4 282 3.0 2.0 2.5 1.1 309 chr3L 21699257 intron CG32447 - chr3L 21699412 intron CG32447 - chr3L 21699566 intron CG32447 - chr3L_4_21695001 chr3L_21695001 S1 1413 chr3L 21710323 21710355 chr3L 21710537 21710569 8 214 22.5 25.0 23.8 0.3 246 chr3L 21710323 intergenic not near genes chr3L 21710446 intergenic not near genes chr3L 21710569 intergenic not near genes chr3L_8_21710001 chr3L_21710001 S1 1414 chr3L 21729189 21729216 chr3L 21731187 21731214 8 1997 12.5 18.5 15.5 0.5 2025 chr3L 21729189 5` UTR Rpb8 + chr3L 21730202 exon CG14570 - chr3L 21731214 exon CG14569 - chr3L_8_21730001 chr3L_21730001 S1 1415 chr3L 21749316 21749344 chr3L 21754477 21754505 Doc 5 5160 3.5 4.0 3.8 1.0 5189 chr3L 21749316 intron Syn1 - chr3L 21751910 intron Syn1 - chr3L 21754505 intron Syn1 - chr3L_5_21750001 chr3L_21750001 S1 1416 chr3L 21767032 21767069 chr3L 21767114 21767151 11 82 1.5 2.5 2.0 3.7 119 chr3L 21767032 intron Syn1 - chr3L 21767092 intron Syn1 - chr3L 21767151 intron Syn1 - chr3L_11_21765001 chr3L_21765001 S1 1417 chr3L 21776670 21776702 chr3L 21776758 21776790 7 88 2.5 2.5 2.5 2.0 120 chr3L 21776670 intron,intron CG42689 +,CG42552 + chr3L 21776730 intron,intron CG42689 +,CG42552 + chr3L 21776790 intron,intron CG42689 +,CG42552 + chr3L_7_21775001 chr3L_21775001 S1 1418 chr3L 21789510 21789540 chr3L 21789594 21789624 13 82 3.5 5.5 4.5 2.4 114 chr3L 21789510 intergenic not near genes chr3L 21789567 intergenic not near genes chr3L 21789624 intergenic not near genes chr3L_13_21785001 chr3L_21785001 S1 1419 chr3L 21852261 21852277 chr3L 21852348 21852371 12 92 4.5 4.0 4.2 2.3 110 chr3L 21852261 intron mub + chr3L 21852316 intron mub + chr3L 21852371 intron mub + chr3L_12_21850001 chr3L_21850001 S1 1420 chr3L 21874496 21874524 chr3L 21874591 21874619 17 95 3.0 4.0 3.5 3.8 123 chr3L 21874496 intron mub + chr3L 21874558 intron mub + chr3L 21874619 intron mub + chr3L_17_21870001 chr3L_21870001 S1 1421 chr3L 21966470 21966508 chr3L 21966554 21966576 10 82 4.0 2.5 3.2 2.4 106 chr3L 21966470 intron CS-2 + chr3L 21966523 intron CS-2 + chr3L 21966576 intron CS-2 + chr3L_10_21965001 chr3L_21965001 S1 1422 chr3L 21971503 21971535 chr3L 21971685 21971715 8 182 1.5 0.0 0.8 4.4 212 chr3L 21971503 intergenic CG7470 + chr3L 21971609 intergenic CG7470 + chr3L 21971715 intergenic CG7470 + chr3L_8_21970001 chr3L_21970001 S1 1423 chr3L 21972568 21972596 chr3L 21972727 21972755 7 159 1.5 3.0 2.2 2.2 187 chr3L 21972568 intron CG7470 + chr3L 21972662 intron CG7470 + chr3L 21972755 intron CG7470 + chr3L_7_21970001 chr3L_21970001 S1 1424 chr3L 22018705 22018740 chr3L 22018785 22018820 11 80 4.5 4.0 4.2 2.1 115 chr3L 22018705 intergenic not near genes chr3L 22018762 intergenic not near genes chr3L 22018820 intergenic not near genes chr3L_11_22015001 chr3L_22015001 S1 1425 chr3L 22023221 22023250 chr3L 22023314 22023343 15 93 1.5 1.0 1.2 6.8 122 chr3L 22023221 intergenic not near genes chr3L 22023282 intergenic not near genes chr3L 22023343 intergenic not near genes chr3L_15_22020001 chr3L_22020001 S1 1426 chr3L 22099674 22099704 chr3L 22105861 22105891 3S18 10 6187 4.5 4.0 4.2 1.9 6217 chr3L 22099674 intergenic not near genes chr3L 22102782 intergenic not near genes chr3L 22105891 intergenic not near genes chr3L_10_22100001 chr3L_22100001 S1 1427 chr3L 22124808 22124838 chr3L 22124892 22124922 16 84 3.0 3.0 3.0 4.0 114 chr3L 22124808 intergenic not near genes chr3L 22124865 intergenic not near genes chr3L 22124922 intergenic not near genes chr3L_16_22120001 chr3L_22120001 S1 1428 chr3L 22130499 22130523 chr3L 22130646 22130670 6 147 1.0 5.5 3.2 1.4 171 chr3L 22130499 intergenic not near genes chr3L 22130584 intergenic not near genes chr3L 22130670 intergenic not near genes chr3L_6_22130001 chr3L_22130001 S1 1429 chr3L 22169452 22169488 chr3L 22169546 22169582 11 94 0.5 3.0 1.8 3.9 130 chr3L 22169452 intron olf413 + chr3L 22169517 intron olf413 + chr3L 22169582 intron olf413 + chr3L_11_22165001 chr3L_22165001 S1 1430 chr3L 22361938 22361969 chr3L 22362016 22362047 7 77 2.5 3.0 2.8 1.8 109 chr3L 22361938 intron Ten-m - chr3L 22361992 intron Ten-m - chr3L 22362047 intron Ten-m - chr3L_7_22360001 chr3L_22360001 S1 1431 chr3L 22395597 22395629 chr3L 22395680 22395713 13 84 2.0 1.0 1.5 5.2 116 chr3L 22395597 intron Ten-m - chr3L 22395655 intron Ten-m - chr3L 22395713 intron Ten-m - chr3L_13_22395001 chr3L_22395001 S1 1432 chr3L 22411368 22411399 chr3L 22411446 22411451 12 73 3.5 5.5 4.5 2.2 83 chr3L 22411368 intergenic not near genes chr3L 22411410 intergenic not near genes chr3L 22411451 intergenic not near genes chr3L_12_22410001 chr3L_22410001 S1 1433 chr3L 22507123 22507154 chr3L 22507209 22507242 14 87 7.5 5.5 6.5 1.9 119 chr3L 22507123 intergenic not near genes chr3L 22507182 intergenic not near genes chr3L 22507242 intergenic not near genes chr3L_14_22505001 chr3L_22505001 S1 1434 chr3L 22522696 22522726 chr3L 22522774 22522804 15 78 4.0 4.0 4.0 3.0 108 chr3L 22522696 intergenic not near genes chr3L 22522750 intergenic not near genes chr3L 22522804 intergenic not near genes chr3L_15_22520001 chr3L_22520001 S1 1435 chr3L 22542883 22542913 chr3L 22543005 22543035 8 122 1.0 0.5 0.8 4.4 152 chr3L 22542883 intergenic not near genes chr3L 22542959 intergenic not near genes chr3L 22543035 intergenic not near genes chr3L_8_22540001 chr3L_22540001 S1 1436 chr3L 22544398 22544420 chr3L 22544476 22544498 8 78 4.0 3.5 3.8 1.7 100 chr3L 22544398 intergenic not near genes chr3L 22544448 intergenic not near genes chr3L 22544498 intergenic not near genes chr3L_8_22540001 chr3L_22540001 S1 1437 chr3L 22554422 22554454 chr3L 22554498 22554531 19 77 5.0 4.5 4.8 3.3 109 chr3L 22554422 intergenic not near genes chr3L 22554476 intergenic not near genes chr3L 22554531 intergenic not near genes chr3L_19_22550001 chr3L_22550001 S1 1438 chr3L 22555779 22555803 chr3L 22563238 22563273 blood 14 7470 3.0 1.0 2.0 4.7 7494 chr3L 22555779 intergenic not near genes chr3L 22559526 intergenic not near genes chr3L 22563273 intergenic not near genes chr3L_14_22555001 chr3L_22555001 S1 1439 chr3L 22569575 22569602 chr3L 22569674 22569701 8 99 1.5 3.0 2.2 2.5 126 chr3L 22569575 intergenic not near genes chr3L 22569638 intergenic not near genes chr3L 22569701 intergenic not near genes chr3L_8_22565001 chr3L_22565001 S1 1440 chr3L 22577618 22577623 chr3L 22582407 22582412 Doc 4 4789 5.5 3.0 4.2 0.8 4794 chr3L 22577618 intergenic not near genes chr3L 22580015 intergenic not near genes chr3L 22582412 3` UTR CG14459 - chr3L_4_22580001 chr3L_22580001 S1 1441 chr3L 22577624 22577655 chr3L 22582402 22582405 Doc 12 4785 0.5 2.0 1.2 5.5 4781 chr3L 22577624 intergenic not near genes chr3L 22580014 intergenic not near genes chr3L 22582405 3` UTR CG14459 - chr3L_12_22580001 chr3L_22580001 S1 1442 chr3L 22617188 22617222 chr3L 22624641 22624675 blood 7 7453 3.0 4.0 3.5 1.6 7487 chr3L 22617188 intron CG14459 - chr3L 22620932 intron CG14459 - chr3L 22624675 intron CG14459 - chr3L_7_22620001 chr3L_22620001 S1 1443 chr3L 22732463 22732490 chr3L 22732545 22732572 5 82 2.5 2.0 2.2 1.6 109 chr3L 22732463 intron CG11367 + chr3L 22732518 intron CG11367 + chr3L 22732572 intron CG11367 + chr3L_5_22730001 chr3L_22730001 S1 1444 chr3L 22756406 22756425 chr3L 22756484 22756503 12 78 1.5 4.5 3.0 3.0 97 chr3L 22756406 intron SPoCk + chr3L 22756454 intron SPoCk + chr3L 22756503 intron SPoCk + chr3L_12_22755001 chr3L_22755001 S1 1445 chr3L 22761391 22761417 chr3L 22766826 22766852 Ivk 13 5435 2.0 4.5 3.2 3.1 5461 chr3L 22761391 intron SPoCk + chr3L 22764122 intron SPoCk + chr3L 22766852 intron SPoCk + chr3L_13_22760001 chr3L_22760001 S1 1446 chr3L 22771632 22771665 chr3L 22771715 22771748 15 82 8.0 4.0 6.0 2.1 116 chr3L 22771632 intron SPoCk + chr3L 22771690 intron SPoCk + chr3L 22771748 intron SPoCk + chr3L_15_22770001 chr3L_22770001 S1 1447 chr3L 22853697 22853722 chr3L 22853784 22853809 9 87 1.5 4.0 2.8 2.4 112 chr3L 22853697 5` UTR CR43426 + chr3L 22853753 5` UTR CR43426 + chr3L 22853809 5` UTR CR43426 + chr3L_9_22850001 chr3L_22850001 S1 1448 chr3L 22865986 22866013 chr3L 22867120 22867147 Doc 8 1134 2.0 3.5 2.8 2.1 1161 chr3L 22865986 intron CG33170 + chr3L 22866566 intron CG33170 + chr3L 22867147 intron CG33170 + chr3L_8_22865001 chr3L_22865001 S1 1449 chr3L 22897197 22897221 chr3L 22897281 22897305 19 83 4.5 6.0 5.2 3.1 108 chr3L 22897197 intergenic not near genes chr3L 22897251 intergenic not near genes chr3L 22897305 intergenic not near genes chr3L_19_22895001 chr3L_22895001 S1 1450 chr3L 19220633 19220637 chr3L 22908066 22908066 26 3687431 24.0 16.0 20.0 1.2 3687433 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908066 intergenic not near genes chr3L_26_21060001 chr3L_21060001 S1 1451 chr3L 20525228 20525230 chr3L 22908066 22908066 5 2382837 6.5 16.0 11.2 0.4 2382838 chr3L 20525228 intron CG4825 - chr3L 21716647 intergenic not near genes chr3L 22908066 intergenic not near genes chr3L_5_21715001 chr3L_21715001 S1 1452 chr3L 19220632 19220637 chr3L 22908067 22908067 16 3687432 24.0 16.0 20.0 0.8 3687435 chr3L 19220632 intron fz2 - chr3L 21064350 intron siz + chr3L 22908067 intergenic not near genes chr3L_16_21060001 chr3L_21060001 S1 1453 chr3L 22909018 22909053 chr3L 22909110 22909145 15 92 4.5 2.5 3.5 3.3 127 chr3L 22909018 intergenic CR45661 + chr3L 22909082 intergenic CR45661 + chr3L 22909145 intergenic CR45661 + chr3L_15_22905001 chr3L_22905001 S1 1454 chr3L 22966419 22966447 chr3L 22966644 22966672 10 225 2.0 5.5 3.8 2.1 253 chr3L 22966419 intergenic not near genes chr3L 22966546 intergenic not near genes chr3L 22966672 intergenic not near genes chr3L_10_22965001 chr3L_22965001 S1 1455 chr3L 22989869 22989892 chr3L 22996844 22996867 297 8 6974 5.5 7.0 6.2 1.1 6998 chr3L 22989869 intergenic not near genes chr3L 22993368 intergenic not near genes chr3L 22996867 intergenic not near genes chr3L_8_22990001 chr3L_22990001 S1 1456 chr3L 23319654 23319689 chr3L 23319746 23319781 5 92 2.5 3.5 3.0 1.2 127 chr3L 23319654 intron alpha-Cat - chr3L 23319718 intron alpha-Cat - chr3L 23319781 intron alpha-Cat - chr3L_5_23315001 chr3L_23315001 S1 1457 chr3L 23875524 23875556 chr3L 23875606 23875631 12 81 4.0 5.0 4.5 2.2 107 chr3L 23875524 intron CG40470 - chr3L 23875578 intron CG40470 - chr3L 23875631 intron CG40470 - chr3L_12_23875001 chr3L_23875001 S1 1458 chr3L 24168788 24168822 chr3L 24176117 24176135 ZAM 13 7324 5.0 6.0 5.5 2.0 7347 chr3L 24168788 intron Snap25 + chr3L 24172462 intron Snap25 + chr3L 24176135 intron Snap25 + chr3L_13_24170001 chr3L_24170001 S1 1459 chr3L 24241961 24241984 chr3L 24242048 24242073 10 87 5.5 2.5 4.0 2.0 112 chr3L 24241961 intron Snap25 + chr3L 24242017 intron Snap25 + chr3L 24242073 intron Snap25 + chr3L_10_24240001 chr3L_24240001 S1 1460 chr3L 24791895 24791919 chr3L 24796675 24796699 Doc 7 4780 2.0 3.0 2.5 2.0 4804 chr3L 24791895 intergenic not near genes chr3L 24794297 intergenic not near genes chr3L 24796699 intergenic not near genes chr3L_7_24790001 chr3L_24790001 S1 1461 chr3L 18198931 18198931 chr3L 24821492 24821492 6 6622561 0.0 9.0 4.5 1.1 6622561 chr3L 18198931 intergenic not near genes chr3L 21510212 intron M6 + chr3L 24821492 intergenic not near genes chr3L_6_21510001 chr3L_21510001 S1 1462 chr3L 25331635 25331650 chr3L 25331727 25331742 13 92 11.0 4.5 7.8 1.5 107 chr3L 25331635 intergenic not near genes chr3L 25331688 intergenic not near genes chr3L 25331742 intergenic not near genes chr3L_13_25330001 chr3L_25330001 S1 1463 chr3L 25502205 25502231 chr3L 25502309 25502335 4 104 11.0 13.0 12.0 0.3 130 chr3L 25502205 intron CG41343 - chr3L 25502270 intron CG41343 - chr3L 25502335 intron CG41343 - chr3L_4_25500001 chr3L_25500001 S1 1464 chr3L 25628502 25628520 chr3L 25633274 25633292 F-element 6 4772 5.0 3.0 4.0 1.2 4790 chr3L 25628502 intron CG41343 - chr3L 25630897 intron CG41343 - chr3L 25633292 intron CG41343 - chr3L_6_25630001 chr3L_25630001 S1 1465 chr3L 25635635 25635658 chr3L 25635726 25635749 6 91 4.0 0.0 2.0 2.0 114 chr3L 25635635 intron CG41343 - chr3L 25635692 intron CG41343 - chr3L 25635749 intron CG41343 - chr3L_6_25635001 chr3L_25635001 S1 1466 chr3L 25975455 25975459 chr3L 25975540 25975545 4 86 3.0 2.0 2.5 1.1 90 chr3L 25975455 intron CG40178 - chr3L 25975500 intron CG40178 - chr3L 25975545 intron CG40178 - chr3L_4_25975001 chr3L_25975001 S1 1467 chr3L 23311672 23311683 chr3L 26026794 26026804 G6 4 2715121 19.5 23.0 21.2 0.2 2715132 chr3L 23311672 intergenic not near genes chr3L 24669238 intergenic not near genes chr3L 26026804 intergenic not near genes chr3L_4_24665001 chr3L_24665001 S1 1468 chr3L 26717666 26717693 chr3L 26717743 26717770 13 77 6.5 3.5 5.0 2.2 104 chr3L 26717666 intergenic not near genes chr3L 26717718 intergenic not near genes chr3L 26717770 intergenic not near genes chr3L_13_26715001 chr3L_26715001 S1 1469 chr3L 27269439 27269460 chr3L 27269523 27269544 5 84 0.5 3.5 2.0 1.7 105 chr3L 27269439 intergenic not near genes chr3L 27269492 intergenic not near genes chr3L 27269544 intergenic not near genes chr3L_5_27265001 chr3L_27265001 S1 1470 chr3L 27390688 27390710 chr3L 27390768 27390790 12 80 45.5 36.5 41.0 0.3 102 chr3L 27390688 intron Dbp80 + chr3L 27390739 intron Dbp80 + chr3L 27390790 intron Dbp80 + chr3L_12_27390001 chr3L_27390001 S1 1471 chr3R 1252421 1252426 chr3R 1266231 1266236 297 5 13810 28.0 18.0 23.0 0.2 13815 chr3R 1252421 intergenic not near genes chr3R 1259328 intergenic not near genes chr3R 1266236 intergenic not near genes chr3R_5_1255001 chr3R_1255001 S1 1472 chr3R 1446691 1446692 chr3R 2999473 2999474 invader2 4 1552782 10.5 4.5 7.5 0.5 1552783 chr3R 1446691 intron CG40155 + chr3R 2223082 intergenic not near genes chr3R 2999474 intron CG42618 - chr3R_4_2220001 chr3R_2220001 S1 1473 chr3R 1866435 1866443 chr3R 1866796 1866804 5 361 22.5 17.5 20.0 0.2 369 chr3R 1866435 intron CG42623 + chr3R 1866620 intron CG42623 + chr3R 1866804 intron CG42623 + chr3R_5_1865001 chr3R_1865001 S1 1474 chr3R 2424351 2424361 chr3R 27441918 27441928 4 25017567 9.0 4.5 6.8 0.5 25017577 chr3R 2424351 intergenic not near genes chr3R 14933140 intergenic not near genes chr3R 27441928 intergenic not near genes chr3R_4_14930001 chr3R_14930001 S1 1475 chr3R 2490901 2490929 chr3R 2491006 2491033 11 104 2.0 9.0 5.5 1.7 132 chr3R 2490901 intergenic not near genes chr3R 2490967 intergenic not near genes chr3R 2491033 intergenic not near genes chr3R_11_2490001 chr3R_2490001 S1 1476 chr3R 2534136 2534167 chr3R 2541705 2541737 18 7570 16.0 22.5 19.2 0.9 7601 chr3R 2534136 intergenic not near genes chr3R 2537936 intergenic not near genes chr3R 2541737 intergenic not near genes chr3R_18_2535001 chr3R_2535001 S1 1477 chr3R 2556891 2556910 chr3R 2557623 2557643 6 732 23.5 16.5 20.0 0.3 752 chr3R 2556891 intron CG41056 - chr3R 2557267 intron CG41056 - chr3R 2557643 intron CG41056 - chr3R_6_2555001 chr3R_2555001 S1 1478 chr3R 4063809 4063828 chr3R 4069090 4069106 6 5280 6.5 7.0 6.8 0.8 5297 chr3R 4063809 intergenic not near genes chr3R 4066458 intergenic not near genes chr3R 4069106 intergenic not near genes chr3R_6_4065001 chr3R_4065001 S1 1479 chr3R 4105041 4105070 chr3R 4110246 4110274 copia 4 5205 2.5 2.0 2.2 1.2 5233 chr3R 4105041 intergenic not near genes chr3R 4107658 intergenic not near genes chr3R 4110274 intergenic not near genes chr3R_4_4105001 chr3R_4105001 S1 1480 chr3R 4132905 4132924 chr3R 4133060 4133079 8 155 1.0 3.5 2.2 2.5 174 chr3R 4132905 5` UTR Gfat1 + chr3R 4132992 intron Gfat1 + chr3R 4133079 intron Gfat1 + chr3R_8_4130001 chr3R_4130001 S1 1481 chr3R 4236947 4236974 chr3R 4237018 4237051 10 76 6.0 4.5 5.2 1.6 104 chr3R 4236947 intron Gel + chr3R 4236999 intron Gel + chr3R 4237051 intron Gel + chr3R_10_4235001 chr3R_4235001 S1 1482 chr3R 4366762 4366791 chr3R 4375146 4375175 roo 11 8384 1.5 1.5 1.5 4.4 8413 chr3R 4366762 3` UTR CG1090 + chr3R 4370968 intergenic not near genes chr3R 4375175 5` UTR CR44922 + chr3R_11_4370001 chr3R_4370001 S1 1483 chr3R 4408410 4408427 chr3R 4412715 4412732 Juan 8 4305 6.0 3.5 4.8 1.4 4322 chr3R 4408410 intron CG32944 - chr3R 4410571 intron CG32944 - chr3R 4412732 intron CG32944 - chr3R_8_4410001 chr3R_4410001 S1 1484 chr3R 4598606 4598638 chr3R 4598692 4598724 11 86 0.5 3.0 1.8 3.9 118 chr3R 4598606 intron CR44317 - chr3R 4598665 intron CR44317 - chr3R 4598724 intron CR44317 - chr3R_11_4595001 chr3R_4595001 S1 1485 chr3R 4599298 4599333 chr3R 4599382 4599418 8 85 1.5 0.5 1.0 4.0 120 chr3R 4599298 intron CR44317 - chr3R 4599358 intron CR44317 - chr3R 4599418 intron CR44317 - chr3R_8_4595001 chr3R_4595001 S1 1486 chr3R 4625681 4625712 chr3R 4625767 4625798 13 86 4.5 2.5 3.5 2.9 117 chr3R 4625681 intron 5-HT2A + chr3R 4625740 intron 5-HT2A + chr3R 4625798 intron 5-HT2A + chr3R_13_4625001 chr3R_4625001 S1 1487 chr3R 4680704 4680741 chr3R 4680784 4680821 13 80 1.5 2.0 1.8 4.6 117 chr3R 4680704 intron CG43427 + chr3R 4680762 intron CG43427 + chr3R 4680821 5` UTR CG43427 + chr3R_13_4680001 chr3R_4680001 S1 1488 chr3R 4697053 4697084 chr3R 4697141 4697172 17 88 6.5 4.0 5.2 2.7 119 chr3R 4697053 intron CG43427 + chr3R 4697112 intron CG43427 + chr3R 4697172 intron CG43427 + chr3R_17_4695001 chr3R_4695001 S1 1489 chr3R 4753240 4753266 chr3R 4757544 4757569 F-element 10 4304 7.5 7.0 7.2 1.2 4329 chr3R 4753240 intron,intron atms +,CG44098 - chr3R 4755404 intron,intron atms +,CG44098 - chr3R 4757569 intron,exon atms +,CG44098 - chr3R_10_4755001 chr3R_4755001 S1 1490 chr3R 4796110 4796140 chr3R 4796234 4796264 9 123 6.0 1.0 3.5 2.0 154 chr3R 4796110 intron ctrip - chr3R 4796187 intron ctrip - chr3R 4796264 intron ctrip - chr3R_9_4795001 chr3R_4795001 S1 1491 chr3R 4861564 4861594 chr3R 4861646 4861676 14 81 3.5 3.0 3.2 3.3 112 chr3R 4861564 intron opa + chr3R 4861620 intron opa + chr3R 4861676 intron opa + chr3R_14_4860001 chr3R_4860001 S1 1492 chr3R 4887478 4887507 chr3R 4894856 4894885 rover 4 7378 5.0 5.5 5.2 0.6 7407 chr3R 4887478 intergenic not near genes chr3R 4891182 intergenic not near genes chr3R 4894885 intergenic not near genes chr3R_4_4890001 chr3R_4890001 S1 1493 chr3R 4922346 4922361 chr3R 4922426 4922441 8 80 3.5 4.5 4.0 1.6 95 chr3R 4922346 intron Cdep + chr3R 4922394 intron Cdep + chr3R 4922441 intron Cdep + chr3R_8_4920001 chr3R_4920001 S1 1494 chr3R 4981409 4981440 chr3R 4981489 4981514 6 78 3.0 4.5 3.8 1.2 105 chr3R 4981409 intergenic not near genes chr3R 4981462 intergenic not near genes chr3R 4981514 intergenic CG14662 - chr3R_6_4980001 chr3R_4980001 S1 1495 chr3R 4984300 4984331 chr3R 4984393 4984424 6 93 0.5 2.5 1.5 2.4 124 chr3R 4984300 intergenic CG14662 -,CR43424 -,CR43478 + chr3R 4984362 intergenic CG14662 -,CR43424 -,CR43478 + chr3R 4984424 intergenic CR43424 -,CG14662 - chr3R_6_4980001 chr3R_4980001 S1 1496 chr3R 4999936 4999958 chr3R 5000098 5000113 5 158 2.0 3.0 2.5 1.4 177 chr3R 4999936 intron CG2022 - chr3R 5000024 intron CG2022 - chr3R 5000113 intron CG2022 - chr3R_5_5000001 chr3R_5000001 S1 1497 chr3R 5045842 5045873 chr3R 5052945 5052976 HMS-Beagle 15 7103 5.5 3.0 4.2 2.9 7134 chr3R 5045842 intron CR43635 - chr3R 5049409 intergenic not near genes chr3R 5052976 intergenic CR45588 - chr3R_15_5045001 chr3R_5045001 S1 1498 chr3R 5067979 5068007 chr3R 5073497 5073525 mdg3 11 5517 4.0 3.5 3.8 2.3 5546 chr3R 5067979 intergenic not near genes chr3R 5070752 intergenic not near genes chr3R 5073525 intergenic not near genes chr3R_11_5070001 chr3R_5070001 S1 1499 chr3R 5158143 5158176 chr3R 5158237 5158270 18 94 3.5 4.0 3.8 3.8 127 chr3R 5158143 intron dpr16 + chr3R 5158206 intron dpr16 + chr3R 5158270 intron dpr16 + chr3R_18_5155001 chr3R_5155001 S1 1500 chr3R 5191365 5191396 chr3R 5191640 5191671 10 275 34.0 31.0 32.5 0.3 306 chr3R 5191365 intron cno - chr3R 5191518 intron cno - chr3R 5191671 intron cno - chr3R_10_5190001 chr3R_5190001 S1 1501 chr3R 5385974 5386005 chr3R 5386146 5386177 6 172 3.5 6.0 4.8 1.0 203 chr3R 5385974 intron kkv - chr3R 5386076 intron kkv - chr3R 5386177 intron kkv - chr3R_6_5385001 chr3R_5385001 S1 1502 chr3R 5418108 5418145 chr3R 5418382 5418419 18 274 3.0 5.0 4.0 3.6 311 chr3R 5418108 intron CG14669 + chr3R 5418264 intron CG14669 + chr3R 5418419 intron CG14669 + chr3R_18_5415001 chr3R_5415001 S1 1503 chr3R 5437963 5437991 chr3R 5438074 5438102 7 110 3.0 2.5 2.8 1.8 139 chr3R 5437963 intron CG14669 + chr3R 5438032 intron CG14669 + chr3R 5438102 intron CG14669 + chr3R_7_5435001 chr3R_5435001 S1 1504 chr3R 5445958 5445991 chr3R 5452419 5452452 Burdock 10 6461 2.5 3.0 2.8 2.6 6494 chr3R 5445958 intron CG14669 + chr3R 5449205 intron CG14669 + chr3R 5452452 intron CG14669 + chr3R_10_5445001 chr3R_5445001 S1 1505 chr3R 5497042 5497079 chr3R 5497910 5497947 12 868 40.0 38.5 39.2 0.3 905 chr3R 5497042 intron CG31547 - chr3R 5497494 intron CG31547 - chr3R 5497947 intron CG31547 - chr3R_12_5495001 chr3R_5495001 S1 1506 chr3R 5502608 5502618 chr3R 5502687 5502698 11 80 3.0 11.5 7.2 1.3 90 chr3R 5502608 5` UTR CG31547 - chr3R 5502653 5` UTR CG31547 - chr3R 5502698 5` UTR CG31547 - chr3R_11_5500001 chr3R_5500001 S1 1507 chr3R 5515142 5515163 chr3R 5515220 5515241 6 78 3.0 1.5 2.2 1.9 99 chr3R 5515142 intron Nmdar1 - chr3R 5515192 intron Nmdar1 - chr3R 5515241 intron Nmdar1 - chr3R_6_5515001 chr3R_5515001 S1 1508 chr3R 5587742 5587767 chr3R 5592968 5592994 7 5227 21.5 24.5 23.0 0.3 5252 chr3R 5587742 exon CG2926 - chr3R 5590368 exon noi - chr3R 5592994 exon Vha26 + chr3R_7_5590001 chr3R_5590001 S1 1509 chr3R 5712081 5712115 chr3R 5712170 5712204 7 89 2.5 2.0 2.2 2.2 123 chr3R 5712081 3` UTR plx + chr3R 5712142 3` UTR plx + chr3R 5712204 3` UTR plx + chr3R_7_5710001 chr3R_5710001 S1 1510 chr3R 5726088 5726120 chr3R 5726251 5726283 10 163 3.5 2.5 3.0 2.5 195 chr3R 5726088 intergenic not near genes chr3R 5726186 intergenic not near genes chr3R 5726283 intergenic not near genes chr3R_10_5725001 chr3R_5725001 S1 1511 chr3R 5746014 5746046 chr3R 5746256 5746288 pogo 11 241 3.5 1.5 2.5 3.1 274 chr3R 5746014 3` UTR Madm + chr3R 5746151 3` UTR Madm + chr3R 5746288 3` UTR Madm + chr3R_11_5745001 chr3R_5745001 S1 1512 chr3R 5747022 5747039 chr3R 5753214 5753225 diver 7 6191 4.0 3.0 3.5 1.6 6203 chr3R 5747022 intergenic Madm + chr3R 5750124 intergenic not near genes chr3R 5753225 intergenic CG2091 - chr3R_7_5750001 chr3R_5750001 S1 1513 chr3R 5772376 5772407 chr3R 5772535 5772566 13 159 2.0 3.5 2.8 3.4 190 chr3R 5772376 intron CG2082 - chr3R 5772471 intron CG2082 - chr3R 5772566 intron CG2082 - chr3R_13_5770001 chr3R_5770001 S1 1514 chr3R 5809114 5809144 chr3R 5809356 5809386 pogo 6 242 2.5 2.5 2.5 1.7 272 chr3R 5809114 3` UTR CG11000 + chr3R 5809250 3` UTR CG11000 + chr3R 5809386 3` UTR CG11000 + chr3R_6_5805001 chr3R_5805001 S1 1515 chr3R 5846430 5846458 chr3R 5849903 5849931 13 3473 26.0 26.5 26.2 0.5 3501 chr3R 5846430 3` UTR CG1213 + chr3R 5848180 intergenic CG14676 + chr3R 5849931 3` UTR disp - chr3R_13_5845001 chr3R_5845001 S1 1516 chr3R 5927560 5927585 chr3R 5927801 5927826 pogo 13 241 5.0 6.5 5.8 1.9 266 chr3R 5927560 intron CG34113 - chr3R 5927693 intron CG34113 - chr3R 5927826 intron CG34113 - chr3R_13_5925001 chr3R_5925001 S1 1517 chr3R 5947963 5948002 chr3R 5948059 5948096 16 96 3.0 1.5 2.2 5.0 133 chr3R 5947963 intron CG34113 - chr3R 5948030 intron CG34113 - chr3R 5948096 intron CG34113 - chr3R_16_5945001 chr3R_5945001 S1 1518 chr3R 5956574 5956582 chr3R 5956653 5956661 4 79 2.5 3.0 2.8 1.1 87 chr3R 5956574 intron CG34113 - chr3R 5956618 intron CG34113 - chr3R 5956661 intron CG34113 - chr3R_4_5955001 chr3R_5955001 S1 1519 chr3R 5989342 5989367 chr3R 5989426 5989451 7 84 3.0 5.5 4.2 1.3 109 chr3R 5989342 5` UTR CR44927 + chr3R 5989396 5` UTR CR44927 + chr3R 5989451 5` UTR CR44927 + chr3R_7_5985001 chr3R_5985001 S1 1520 chr3R 6015960 6015995 chr3R 6024442 6024477 Tirant 13 8482 4.0 1.5 2.8 3.4 8517 chr3R 6015960 intergenic not near genes chr3R 6020218 intergenic not near genes chr3R 6024477 intergenic not near genes chr3R_13_6020001 chr3R_6020001 S1 1521 chr3R 6158511 6158536 chr3R 6167095 6167117 Tirant 10 8584 5.5 5.0 5.2 1.6 8606 chr3R 6158511 intergenic not near genes chr3R 6162814 intergenic not near genes chr3R 6167117 intergenic CG1077 + chr3R_10_6160001 chr3R_6160001 S1 1522 chr3R 6175175 6175207 chr3R 6182448 6182480 HMS-Beagle2 4 7273 1.0 3.5 2.2 1.2 7305 chr3R 6175175 intergenic Osi1 + chr3R 6178828 intron CR45194 + chr3R 6182480 intergenic CR45194 + chr3R_4_6175001 chr3R_6175001 S1 1523 chr3R 6191174 6191197 chr3R 6191248 6191278 13 80 4.5 1.5 3.0 3.2 104 chr3R 6191174 intron NPFR + chr3R 6191226 intron NPFR + chr3R 6191278 intron NPFR + chr3R_13_6190001 chr3R_6190001 S1 1524 chr3R 6206283 6206318 chr3R 6206501 6206536 BS 12 218 7.5 5.5 6.5 1.6 253 chr3R 6206283 exon Osi24 + chr3R 6206410 intron Osi24 + chr3R 6206536 intron Osi24 + chr3R_12_6205001 chr3R_6205001 S1 1525 chr3R 6334787 6334811 chr3R 6334886 6334910 5 98 0.0 3.0 1.5 2.0 123 chr3R 6334787 intergenic not near genes chr3R 6334848 intergenic not near genes chr3R 6334910 intergenic Osi19 + chr3R_5_6330001 chr3R_6330001 S1 1526 chr3R 6428821 6428839 chr3R 6428924 6428942 6 103 3.5 3.5 3.5 1.3 121 chr3R 6428821 intron gpp + chr3R 6428882 intron gpp + chr3R 6428942 intron gpp + chr3R_6_6425001 chr3R_6425001 S1 1527 chr3R 6461577 6461612 chr3R 6461659 6461693 6 81 3.5 2.0 2.8 1.6 116 chr3R 6461577 intergenic not near genes chr3R 6461635 intergenic not near genes chr3R 6461693 intergenic not near genes chr3R_6_6460001 chr3R_6460001 S1 1528 chr3R 6499624 6499658 chr3R 6499705 6499739 10 81 6.5 3.0 4.8 1.7 115 chr3R 6499624 intergenic not near genes chr3R 6499682 intergenic not near genes chr3R 6499739 intergenic not near genes chr3R_10_6495001 chr3R_6495001 S1 1529 chr3R 6510023 6510050 chr3R 6515105 6515132 jockey 7 5082 3.5 3.0 3.2 1.7 5109 chr3R 6510023 intergenic not near genes chr3R 6512578 intergenic not near genes chr3R 6515132 intergenic not near genes chr3R_7_6510001 chr3R_6510001 S1 1530 chr3R 6526347 6526378 chr3R 6526540 6526571 6 193 2.0 1.0 1.5 2.4 224 chr3R 6526347 intergenic not near genes chr3R 6526459 intergenic not near genes chr3R 6526571 intergenic not near genes chr3R_6_6525001 chr3R_6525001 S1 1531 chr3R 6702002 6702036 chr3R 6705893 6705927 14 3891 33.5 23.0 28.2 0.5 3925 chr3R 6702002 3` UTR Ccp84Ab - chr3R 6703964 intergenic Ccp84Aa + chr3R 6705927 intergenic not near genes chr3R_14_6700001 chr3R_6700001 S1 1532 chr3R 6737500 6737530 chr3R 6739288 6739318 Doc 11 1787 2.5 2.5 2.5 3.1 1818 chr3R 6737500 intron pb - chr3R 6738409 intron pb - chr3R 6739318 intron pb - chr3R_11_6735001 chr3R_6735001 S1 1533 chr3R 6804201 6804226 chr3R 6804311 6804329 10 109 3.0 3.0 3.0 2.5 128 chr3R 6804201 intergenic not near genes chr3R 6804265 intergenic not near genes chr3R 6804329 intergenic not near genes chr3R_10_6800001 chr3R_6800001 S1 1534 chr3R 6891236 6891271 chr3R 6891313 6891348 7 77 3.0 1.5 2.2 2.2 112 chr3R 6891236 intergenic not near genes chr3R 6891292 intergenic not near genes chr3R 6891348 intergenic not near genes chr3R_7_6890001 chr3R_6890001 S1 1535 chr3R 6918064 6918095 chr3R 6918143 6918174 8 79 2.0 2.0 2.0 2.7 110 chr3R 6918064 intron Antp - chr3R 6918119 intron Antp - chr3R 6918174 intron Antp - chr3R_8_6915001 chr3R_6915001 S1 1536 chr3R 6978882 6978911 chr3R 6978968 6978997 7 86 3.5 3.5 3.5 1.6 115 chr3R 6978882 intron Antp - chr3R 6978940 intron Antp - chr3R 6978997 intron Antp - chr3R_7_6975001 chr3R_6975001 S1 1537 chr3R 7012753 7012786 chr3R 7012841 7012874 11 88 3.0 5.0 4.0 2.2 121 chr3R 7012753 intergenic not near genes chr3R 7012814 intergenic not near genes chr3R 7012874 intergenic not near genes chr3R_11_7010001 chr3R_7010001 S1 1538 chr3R 7103282 7103309 chr3R 7103359 7103386 7 77 7.5 4.5 6.0 1.0 104 chr3R 7103282 intron Alh - chr3R 7103334 intron Alh - chr3R 7103386 intron Alh - chr3R_7_7100001 chr3R_7100001 S1 1539 chr3R 7106762 7106791 chr3R 7107056 7107085 13 294 3.0 4.0 3.5 2.9 323 chr3R 7106762 intron Alh - chr3R 7106924 intron Alh - chr3R 7107085 intron Alh - chr3R_13_7105001 chr3R_7105001 S1 1540 chr3R 7126513 7126533 chr3R 7126609 7126629 4 96 0.5 2.0 1.2 1.8 116 chr3R 7126513 3` UTR CG10068 - chr3R 7126571 3` UTR CG10068 - chr3R 7126629 3` UTR CG10068 - chr3R_4_7125001 chr3R_7125001 S1 1541 chr3R 7173682 7173709 chr3R 7173763 7173790 5 81 2.0 2.5 2.2 1.6 108 chr3R 7173682 intron sas + chr3R 7173736 intron sas + chr3R 7173790 intron sas + chr3R_5_7170001 chr3R_7170001 S1 1542 chr3R 7217459 7217490 chr3R 7217681 7217712 5 222 1.5 1.5 1.5 2.0 253 chr3R 7217459 intergenic CG14605 -,CG14606 - chr3R 7217586 intergenic CG14605 - chr3R 7217712 3` UTR CG14605 - chr3R_5_7215001 chr3R_7215001 S1 1543 chr3R 7377345 7377376 chr3R 7377519 7377550 11 174 3.0 4.5 3.8 2.3 205 chr3R 7377345 intergenic not near genes chr3R 7377448 intergenic not near genes chr3R 7377550 intergenic not near genes chr3R_11_7375001 chr3R_7375001 S1 1544 chr3R 7412678 7412710 chr3R 7413177 7413210 6 499 3.0 3.0 3.0 1.5 532 chr3R 7412678 intergenic not near genes chr3R 7412944 intergenic not near genes chr3R 7413210 intergenic not near genes chr3R_6_7410001 chr3R_7410001 S1 1545 chr3R 7425584 7425615 chr3R 7425682 7425713 19 98 4.0 3.0 3.5 4.2 129 chr3R 7425584 intergenic not near genes chr3R 7425648 intergenic not near genes chr3R 7425713 intergenic not near genes chr3R_19_7425001 chr3R_7425001 S1 1546 chr3R 7446333 7446371 chr3R 7446717 7446755 11 384 1.0 2.5 1.8 3.9 422 chr3R 7446333 intergenic not near genes chr3R 7446544 intergenic not near genes chr3R 7446755 intergenic not near genes chr3R_11_7445001 chr3R_7445001 S1 1547 chr3R 7447990 7448010 chr3R 7448069 7448089 6 79 1.0 4.5 2.8 1.6 99 chr3R 7447990 intergenic not near genes chr3R 7448040 intergenic not near genes chr3R 7448089 intergenic not near genes chr3R_6_7445001 chr3R_7445001 S1 1548 chr3R 7480010 7480047 chr3R 7480090 7480127 8 80 3.0 5.5 4.2 1.5 117 chr3R 7480010 intergenic not near genes chr3R 7480068 intergenic not near genes chr3R 7480127 intergenic not near genes chr3R_8_7480001 chr3R_7480001 S1 1549 chr3R 7545695 7545725 chr3R 7545919 7545949 9 224 2.0 0.5 1.2 4.1 254 chr3R 7545695 intergenic alpha-Est1 -,alpha-Est2 + chr3R 7545822 3` UTR alpha-Est1 - chr3R 7545949 3` UTR alpha-Est1 - chr3R_9_7545001 chr3R_7545001 S1 1550 chr3R 7577449 7577485 chr3R 7577532 7577568 10 83 2.0 2.0 2.0 3.3 119 chr3R 7577449 intron CG34127 - chr3R 7577508 intron CG34127 - chr3R 7577568 intron CG34127 - chr3R_10_7575001 chr3R_7575001 S1 1551 chr3R 7581590 7581608 chr3R 7581673 7581674 7 80 7.5 1.0 4.2 1.3 84 chr3R 7581590 intron CG34127 - chr3R 7581632 intron CG34127 - chr3R 7581674 intron CG34127 - chr3R_7_7580001 chr3R_7580001 S1 1552 chr3R 7621550 7621564 chr3R 7621640 7621655 6 91 1.0 8.5 4.8 1.0 105 chr3R 7621550 intron CG34127 - chr3R 7621602 intron CG34127 - chr3R 7621655 intron CG34127 - chr3R_6_7620001 chr3R_7620001 S1 1553 chr3R 7658467 7658488 chr3R 7658555 7658576 10 88 3.0 3.5 3.2 2.4 109 chr3R 7658467 intron Nlg1 + chr3R 7658522 intron Nlg1 + chr3R 7658576 intron Nlg1 + chr3R_10_7655001 chr3R_7655001 S1 1554 chr3R 7694585 7694610 chr3R 7713647 7713650 invader3 8 19059 1.5 5.5 3.5 1.8 19065 chr3R 7694585 3` UTR Nlg1 + chr3R 7704118 intergenic not near genes chr3R 7713650 intergenic not near genes chr3R_8_7700001 chr3R_7700001 S1 1555 chr3R 7729482 7729498 chr3R 7737419 7737437 Stalker2 7 7939 2.5 6.5 4.5 1.3 7955 chr3R 7729482 intergenic not near genes chr3R 7733460 intergenic not near genes chr3R 7737437 intergenic not near genes chr3R_7_7730001 chr3R_7730001 S1 1556 chr3R 7751378 7751408 chr3R 7751455 7751485 17 77 6.5 5.0 5.8 2.5 107 chr3R 7751378 intergenic not near genes chr3R 7751432 intergenic not near genes chr3R 7751485 intergenic not near genes chr3R_17_7750001 chr3R_7750001 S1 1557 chr3R 7760007 7760036 chr3R 7760084 7760113 8 77 1.5 3.5 2.5 2.3 106 chr3R 7760007 intron Sp7 + chr3R 7760060 intron Sp7 + chr3R 7760113 intron Sp7 + chr3R_8_7760001 chr3R_7760001 S1 1558 chr3R 7849643 7849673 chr3R 7850811 7850841 1360 13 1168 1.0 5.5 3.2 3.1 1198 chr3R 7849643 intron CG34384 + chr3R 7850242 intron CG34384 + chr3R 7850841 intron CG34384 + chr3R_13_7850001 chr3R_7850001 S1 1559 chr3R 7857646 7857654 chr3R 7857730 7857738 5 84 3.0 1.5 2.2 1.6 92 chr3R 7857646 3` UTR CG17816 - chr3R 7857692 3` UTR CG17816 - chr3R 7857738 3` UTR CG17816 - chr3R_5_7855001 chr3R_7855001 S1 1560 chr3R 7857655 7857666 chr3R 7857728 7857750 4 81 2.5 1.5 2.0 1.3 95 chr3R 7857655 3` UTR CG17816 - chr3R 7857702 3` UTR CG17816 - chr3R 7857750 3` UTR CG17816 - chr3R_4_7855001 chr3R_7855001 S1 1561 chr3R 8094405 8094431 chr3R 8099711 8099737 Transpac 6 5306 5.0 3.0 4.0 1.2 5332 chr3R 8094405 intron CG7900 + chr3R 8097071 intron CG7900 + chr3R 8099737 intron CG7900 + chr3R_6_8095001 chr3R_8095001 S1 1562 chr3R 8101777 8101790 chr3R 8104862 8104875 G2 6 3085 5.5 7.5 6.5 0.8 3098 chr3R 8101777 exon CG7900 + chr3R 8103326 intron CG7900 + chr3R 8104875 3` UTR CG7900 + chr3R_6_8100001 chr3R_8100001 S1 1563 chr3R 8107387 8107408 chr3R 8107522 8107543 10 135 3.5 0.5 2.0 3.3 156 chr3R 8107387 intron puc + chr3R 8107465 intron puc + chr3R 8107543 intron puc + chr3R_10_8105001 chr3R_8105001 S1 1564 chr3R 8154281 8154311 chr3R 8154367 8154397 13 86 3.5 4.0 3.8 2.7 116 chr3R 8154281 intron grn - chr3R 8154339 intron grn - chr3R 8154397 intron grn - chr3R_13_8150001 chr3R_8150001 S1 1565 chr3R 8207553 8207589 chr3R 8208399 8208435 F-element 12 846 1.5 3.5 2.5 3.4 882 chr3R 8207553 intergenic not near genes chr3R 8207994 intergenic not near genes chr3R 8208435 intergenic not near genes chr3R_12_8205001 chr3R_8205001 S1 1566 chr3R 8213010 8213039 chr3R 8213094 8213123 11 84 4.0 1.5 2.8 2.9 113 chr3R 8213010 intergenic not near genes chr3R 8213066 intergenic not near genes chr3R 8213123 intergenic not near genes chr3R_11_8210001 chr3R_8210001 S1 1567 chr3R 8273734 8273769 chr3R 8273822 8273857 11 88 2.0 6.0 4.0 2.2 123 chr3R 8273734 intergenic not near genes chr3R 8273796 intergenic not near genes chr3R 8273857 intergenic not near genes chr3R_11_8270001 chr3R_8270001 S1 1568 chr3R 8339244 8339247 chr3R 21907534 21907536 31 13568289 19.5 20.0 19.8 1.5 13568292 chr3R 8339244 intergenic not near genes chr3R 15123390 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_31_15120001 chr3R_15120001 S1 1569 chr3R 8403006 8403033 chr3R 8412173 8412200 roo 13 9167 7.0 7.5 7.2 1.6 9194 chr3R 8403006 intron CG45263 - chr3R 8407603 intron CG45263 - chr3R 8412200 intron CG45263 - chr3R_13_8405001 chr3R_8405001 S1 1570 chr3R 8491142 8491164 chr3R 8491238 8491260 12 96 4.5 3.0 3.8 2.5 118 chr3R 8491142 intergenic not near genes chr3R 8491201 intergenic not near genes chr3R 8491260 intergenic not near genes chr3R_12_8490001 chr3R_8490001 S1 1571 chr3R 8570477 8570507 chr3R 8575114 8575144 HMS-Beagle 6 4637 2.0 2.5 2.2 1.9 4667 chr3R 8570477 intergenic not near genes chr3R 8572810 intergenic not near genes chr3R 8575144 intergenic not near genes chr3R_6_8570001 chr3R_8570001 S1 1572 chr3R 8601767 8601787 chr3R 8610920 8610941 roo 8 9154 9.0 4.0 6.5 1.1 9174 chr3R 8601767 intron 5-HT2B + chr3R 8606354 intron 5-HT2B + chr3R 8610941 intron 5-HT2B + chr3R_8_8605001 chr3R_8605001 S1 1573 chr3R 8630904 8630934 chr3R 8631011 8631041 10 106 2.0 1.5 1.8 3.6 137 chr3R 8630904 intergenic not near genes chr3R 8630972 intergenic not near genes chr3R 8631041 intergenic not near genes chr3R_10_8630001 chr3R_8630001 S1 1574 chr3R 8636936 8636965 chr3R 8637240 8637267 11 304 1.0 6.5 3.8 2.3 331 chr3R 8636936 intergenic not near genes chr3R 8637102 intergenic not near genes chr3R 8637267 intergenic not near genes chr3R_11_8635001 chr3R_8635001 S1 1575 chr3R 8639686 8639717 chr3R 8639769 8639800 10 83 3.0 2.0 2.5 2.9 114 chr3R 8639686 intergenic not near genes chr3R 8639743 intergenic not near genes chr3R 8639800 intergenic not near genes chr3R_10_8635001 chr3R_8635001 S1 1576 chr3R 8707358 8707385 chr3R 8709800 8709827 jockey 11 2442 8.0 4.0 6.0 1.6 2469 chr3R 8707358 intergenic not near genes chr3R 8708592 intergenic not near genes chr3R 8709827 intergenic not near genes chr3R_11_8705001 chr3R_8705001 S1 1577 chr3R 8894869 8894905 chr3R 8896026 8896062 1360 8 1157 1.0 3.5 2.2 2.5 1193 chr3R 8894869 intron pyd - chr3R 8895466 intron pyd - chr3R 8896062 intron pyd - chr3R_8_8895001 chr3R_8895001 S1 1578 chr3R 8923229 8923261 chr3R 8990981 8991013 11 67752 3.5 10.5 7.0 1.4 67784 chr3R 8923229 intron pyd - chr3R 8957121 intron CG11966 - chr3R 8991013 exon E(var)3-9 - chr3R_11_8955001 chr3R_8955001 S1 1579 chr3R 8966662 8966679 chr3R 8966804 8966805 4 138 3.5 1.0 2.2 1.2 143 chr3R 8966662 intergenic not near genes chr3R 8966734 intergenic not near genes chr3R 8966805 intergenic not near genes chr3R_4_8965001 chr3R_8965001 S1 1580 chr3R 9036721 9036747 chr3R 9036818 9036844 8 97 0.5 2.5 1.5 3.2 123 chr3R 9036721 intron neur - chr3R 9036782 intron neur - chr3R 9036844 intron neur - chr3R_8_9035001 chr3R_9035001 S1 1581 chr3R 9066649 9066683 chr3R 9066754 9066788 10 105 1.0 2.0 1.5 4.0 139 chr3R 9066649 3` UTR pum - chr3R 9066718 3` UTR pum - chr3R 9066788 3` UTR pum - chr3R_10_9065001 chr3R_9065001 S1 1582 chr3R 9078779 9078814 chr3R 9078863 9078898 16 84 4.0 3.5 3.8 3.3 119 chr3R 9078779 intron pum - chr3R 9078838 intron pum - chr3R 9078898 intron pum - chr3R_16_9075001 chr3R_9075001 S1 1583 chr3R 9079568 9079576 chr3R 9079656 9079664 4 88 18.0 6.5 12.2 0.3 96 chr3R 9079568 intron pum - chr3R 9079616 intron pum - chr3R 9079664 intron pum - chr3R_4_9075001 chr3R_9075001 S1 1584 chr3R 9082041 9082072 chr3R 9082136 9082161 19 94 4.5 5.0 4.8 3.3 120 chr3R 9082041 intron pum - chr3R 9082101 intron pum - chr3R 9082161 intron pum - chr3R_19_9080001 chr3R_9080001 S1 1585 chr3R 9101837 9101872 chr3R 9101936 9101971 6 99 2.0 2.5 2.2 1.9 134 chr3R 9101837 intron pum - chr3R 9101904 intron pum - chr3R 9101971 intron pum - chr3R_6_9100001 chr3R_9100001 S1 1586 chr3R 9108866 9108882 chr3R 9108943 9108959 5 77 2.5 2.5 2.5 1.4 93 chr3R 9108866 intron pum - chr3R 9108912 intron pum - chr3R 9108959 intron pum - chr3R_5_9105001 chr3R_9105001 S1 1587 chr3R 9141142 9141154 chr3R 9141227 9141239 4 85 4.0 4.0 4.0 0.8 97 chr3R 9141142 intron pum - chr3R 9141190 intron pum - chr3R 9141239 intron pum - chr3R_4_9140001 chr3R_9140001 S1 1588 chr3R 9278777 9278811 chr3R 9284038 9284072 Rt1a 20 5261 5.0 6.5 5.8 2.9 5295 chr3R 9278777 intergenic not near genes chr3R 9281424 intergenic not near genes chr3R 9284072 intergenic not near genes chr3R_20_9280001 chr3R_9280001 S1 1589 chr3R 9304525 9304539 chr3R 9311813 9311827 Stalker4 8 7288 9.5 1.5 5.5 1.2 7302 chr3R 9304525 intron CG8861 - chr3R 9308176 intron CG8861 - chr3R 9311827 intron CG8861 - chr3R_8_9305001 chr3R_9305001 S1 1590 chr3R 9319574 9319605 chr3R 9320010 9320041 jockey 8 436 4.0 3.5 3.8 1.7 467 chr3R 9319574 intron CG8861 - chr3R 9319808 intron CG8861 - chr3R 9320041 intron CG8861 - chr3R_8_9315001 chr3R_9315001 S1 1591 chr3R 9361819 9361841 chr3R 9362061 9362083 pogo 7 241 4.0 2.5 3.2 1.7 264 chr3R 9361819 3` UTR CG45050 + chr3R 9361951 3` UTR CG45050 + chr3R 9362083 3` UTR CG45050 + chr3R_7_9360001 chr3R_9360001 S1 1592 chr3R 9382816 9382847 chr3R 9382942 9382973 13 126 2.0 3.0 2.5 3.7 157 chr3R 9382816 intron FER - chr3R 9382894 intron FER - chr3R 9382973 intron FER - chr3R_13_9380001 chr3R_9380001 S1 1593 chr3R 9601461 9601493 chr3R 9601580 9601612 7 119 2.0 3.5 2.8 1.8 151 chr3R 9601461 intron CG8312 + chr3R 9601536 intron CG8312 + chr3R 9601612 intron CG8312 + chr3R_7_9600001 chr3R_9600001 S1 1594 chr3R 9644584 9644613 chr3R 9644666 9644695 4 82 1.0 2.5 1.8 1.4 111 chr3R 9644584 intron Dh44 + chr3R 9644640 intron Dh44 + chr3R 9644695 intron Dh44 + chr3R_4_9640001 chr3R_9640001 S1 1595 chr3R 9684110 9684145 chr3R 9684200 9684235 16 89 3.0 7.0 5.0 2.7 125 chr3R 9684110 5` UTR CG9444 - chr3R 9684172 5` UTR CG9444 - chr3R 9684235 5` UTR CG9444 - chr3R_16_9680001 chr3R_9680001 S1 1596 chr3R 9702259 9702295 chr3R 9702336 9702372 8 77 4.0 2.5 3.2 1.9 113 chr3R 9702259 intron Unc-115a - chr3R 9702316 intron Unc-115a - chr3R 9702372 intron Unc-115a - chr3R_8_9700001 chr3R_9700001 S1 1597 chr3R 9836870 9836897 chr3R 9836959 9836985 17 89 3.5 4.5 4.0 3.4 115 chr3R 9836870 intron Teh1 - chr3R 9836928 intron Teh1 - chr3R 9836985 intron Teh1 - chr3R_17_9835001 chr3R_9835001 S1 1598 chr3R 9874181 9874198 chr3R 9874260 9874277 7 79 4.0 4.5 4.2 1.3 96 chr3R 9874181 intergenic Glut4EF + chr3R 9874229 intergenic Glut4EF + chr3R 9874277 intergenic Glut4EF + chr3R_7_9870001 chr3R_9870001 S1 1599 chr3R 9891460 9891481 chr3R 9891601 9891622 5 141 2.0 1.0 1.5 2.0 162 chr3R 9891460 intron Glut4EF + chr3R 9891541 intron Glut4EF + chr3R 9891622 intron Glut4EF + chr3R_5_9890001 chr3R_9890001 S1 1600 chr3R 9926231 9926265 chr3R 9926316 9926345 10 80 2.0 3.5 2.8 2.6 114 chr3R 9926231 intron Glut4EF + chr3R 9926288 intron Glut4EF + chr3R 9926345 intron Glut4EF + chr3R_10_9925001 chr3R_9925001 S1 1601 chr3R 10067337 10067353 chr3R 10068143 10068159 6 806 1.0 2.0 1.5 2.4 822 chr3R 10067337 intron CG33783 + chr3R 10067748 intergenic CG33784 +,CG33783 + chr3R 10068159 intron CG33784 + chr3R_6_10065001 chr3R_10065001 S1 1602 chr3R 10094344 10094378 chr3R 10094431 10094454 11 86 5.5 4.5 5.0 1.8 110 chr3R 10094344 5` UTR CR43459 + chr3R 10094399 5` UTR CR43459 + chr3R 10094454 5` UTR CR43459 + chr3R_11_10090001 chr3R_10090001 S1 1603 chr3R 10231779 10231814 chr3R 10237357 10237392 mdg3 5 5578 3.0 2.5 2.8 1.3 5613 chr3R 10231779 intron CG42795 + chr3R 10234586 intron CG42795 + chr3R 10237392 intron CG42795 + chr3R_5_10230001 chr3R_10230001 S1 1604 chr3R 10255379 10255381 chr3R 10260819 10260822 I-element 4 5441 6.0 2.5 4.2 0.8 5443 chr3R 10255379 exon Sirt6 - chr3R 10258100 intron Sirt6 - chr3R 10260822 exon Sirt6 - chr3R_4_10255001 chr3R_10255001 S1 1605 chr3R 10275556 10275580 chr3R 10275634 10275658 7 78 4.0 2.0 3.0 1.8 102 chr3R 10275556 intron CG43143 + chr3R 10275607 intron CG43143 + chr3R 10275658 intron CG43143 + chr3R_7_10275001 chr3R_10275001 S1 1606 chr3R 10351417 10351436 chr3R 10351497 10351516 5 80 2.0 2.0 2.0 1.7 99 chr3R 10351417 intron jumu + chr3R 10351466 intron jumu + chr3R 10351516 intron jumu + chr3R_5_10350001 chr3R_10350001 S1 1607 chr3R 10536624 10536643 chr3R 10536705 10536724 5 81 4.5 3.0 3.8 1.0 100 chr3R 10536624 intron hth - chr3R 10536674 intron hth - chr3R 10536724 intron hth - chr3R_5_10535001 chr3R_10535001 S1 1608 chr3R 10559796 10559809 chr3R 10559871 10559895 5 84 3.0 1.5 2.2 1.6 99 chr3R 10559796 intron hth - chr3R 10559846 intron hth - chr3R 10559895 intron hth - chr3R_5_10555001 chr3R_10555001 S1 1609 chr3R 10563132 10563155 chr3R 10563213 10563236 7 81 0.5 2.5 1.5 2.8 104 chr3R 10563132 intron hth - chr3R 10563184 intron hth - chr3R 10563236 intron hth - chr3R_7_10560001 chr3R_10560001 S1 1610 chr3R 10596624 10596630 chr3R 10596701 10596707 7 77 6.5 2.5 4.5 1.3 83 chr3R 10596624 intron hth - chr3R 10596666 intron hth - chr3R 10596707 intron hth - chr3R_7_10595001 chr3R_10595001 S1 1611 chr3R 10724952 10724983 chr3R 10725031 10725062 7 79 0.5 3.0 1.8 2.5 110 chr3R 10724952 intergenic not near genes chr3R 10725007 intergenic not near genes chr3R 10725062 intergenic not near genes chr3R_7_10725001 chr3R_10725001 S1 1612 chr3R 10727641 10727673 chr3R 10727722 10727754 16 81 4.0 5.5 4.8 2.8 113 chr3R 10727641 intergenic not near genes chr3R 10727698 intergenic not near genes chr3R 10727754 intergenic not near genes chr3R_16_10725001 chr3R_10725001 S1 1613 chr3R 10730993 10731024 chr3R 10731160 10731191 5 167 2.5 2.0 2.2 1.6 198 chr3R 10730993 intergenic not near genes chr3R 10731092 intergenic not near genes chr3R 10731191 intergenic not near genes chr3R_5_10730001 chr3R_10730001 S1 1614 chr3R 10804172 10804205 chr3R 10811705 10811738 17.6 5 7533 4.5 4.0 4.2 1.0 7566 chr3R 10804172 intergenic CG14692 - chr3R 10807955 intergenic not near genes chr3R 10811738 3` UTR CG14693 - chr3R_5_10805001 chr3R_10805001 S1 1615 chr3R 10886870 10886897 chr3R 10886951 10886978 8 81 2.0 2.0 2.0 2.7 108 chr3R 10886870 intron Leash + chr3R 10886924 intron Leash + chr3R 10886978 intron Leash + chr3R_8_10885001 chr3R_10885001 S1 1616 chr3R 10919683 10919718 chr3R 10919762 10919797 7 79 4.0 2.0 3.0 1.8 114 chr3R 10919683 intergenic not near genes chr3R 10919740 intergenic not near genes chr3R 10919797 intergenic not near genes chr3R_7_10915001 chr3R_10915001 S1 1617 chr3R 10920046 10920079 chr3R 10920125 10920158 14 79 4.5 4.5 4.5 2.5 112 chr3R 10920046 intergenic not near genes chr3R 10920102 intergenic not near genes chr3R 10920158 intergenic not near genes chr3R_14_10920001 chr3R_10920001 S1 1618 chr3R 10927361 10927380 chr3R 10927605 10927624 7 244 0.0 6.0 3.0 1.8 263 chr3R 10927361 intergenic not near genes chr3R 10927492 intergenic not near genes chr3R 10927624 intergenic not near genes chr3R_7_10925001 chr3R_10925001 S1 1619 chr3R 10957874 10957884 chr3R 10963254 10963270 Rt1c 9 5384 7.0 4.0 5.5 1.4 5396 chr3R 10957874 intergenic not near genes chr3R 10960572 intergenic not near genes chr3R 10963270 intergenic not near genes chr3R_9_10960001 chr3R_10960001 S1 1620 chr3R 10963559 10963588 chr3R 10963654 10963683 6 94 4.0 4.5 4.2 1.2 124 chr3R 10963559 intergenic not near genes chr3R 10963621 intergenic not near genes chr3R 10963683 intergenic not near genes chr3R_6_10960001 chr3R_10960001 S1 1621 chr3R 10971481 10971514 chr3R 10971573 10971606 12 92 3.5 4.5 4.0 2.4 125 chr3R 10971481 intergenic not near genes chr3R 10971544 intergenic not near genes chr3R 10971606 intergenic not near genes chr3R_12_10970001 chr3R_10970001 S1 1622 chr3R 10987277 10987304 chr3R 10988145 10988172 7 868 2.0 3.0 2.5 2.0 895 chr3R 10987277 intron CG34114 + chr3R 10987724 intron CG34114 + chr3R 10988172 intron CG34114 + chr3R_7_10985001 chr3R_10985001 S1 1623 chr3R 11102323 11102352 chr3R 11102405 11102434 12 82 2.0 6.0 4.0 2.4 111 chr3R 11102323 intergenic not near genes chr3R 11102378 intergenic not near genes chr3R 11102434 intergenic not near genes chr3R_12_11100001 chr3R_11100001 S1 1624 chr3R 11103169 11103181 chr3R 11103252 11103264 5 83 0.0 0.0 0.0 5.0 95 chr3R 11103169 intergenic not near genes chr3R 11103216 intergenic not near genes chr3R 11103264 intergenic not near genes chr3R_5_11100001 chr3R_11100001 S1 1625 chr3R 11197986 11198013 chr3R 11198086 11198113 10 100 3.0 2.0 2.5 2.9 127 chr3R 11197986 intron cu + chr3R 11198050 intron cu + chr3R 11198113 intron cu + chr3R_10_11195001 chr3R_11195001 S1 1626 chr3R 11269445 11269466 chr3R 11269571 11269592 7 126 4.0 2.0 3.0 1.8 147 chr3R 11269445 3` UTR CR31386 - chr3R 11269518 3` UTR CR31386 - chr3R 11269592 3` UTR CR31386 - chr3R_7_11265001 chr3R_11265001 S1 1627 chr3R 11325345 11325365 chr3R 11325441 11325461 7 94 1.5 2.5 2.0 2.3 116 chr3R 11325345 intergenic not near genes chr3R 11325403 intergenic not near genes chr3R 11325461 intergenic not near genes chr3R_7_11325001 chr3R_11325001 S1 1628 chr3R 11342540 11342574 chr3R 11342617 11342651 5 77 2.5 3.0 2.8 1.3 111 chr3R 11342540 intron pros + chr3R 11342596 intron pros + chr3R 11342651 intron pros + chr3R_5_11340001 chr3R_11340001 S1 1629 chr3R 11379236 11379268 chr3R 11388392 11388424 roo 14 9156 1.5 2.5 2.0 4.7 9188 chr3R 11379236 intron pros + chr3R 11383830 intron pros + chr3R 11388424 intron pros + chr3R_14_11380001 chr3R_11380001 S1 1630 chr3R 11476952 11476970 chr3R 11477055 11477073 5 103 2.5 0.5 1.5 2.0 121 chr3R 11476952 intergenic not near genes chr3R 11477012 intergenic not near genes chr3R 11477073 intergenic not near genes chr3R_5_11475001 chr3R_11475001 S1 1631 chr3R 11546185 11546209 chr3R 11546262 11546285 6 77 2.5 3.0 2.8 1.6 100 chr3R 11546185 intergenic not near genes chr3R 11546235 intergenic not near genes chr3R 11546285 intergenic not near genes chr3R_6_11545001 chr3R_11545001 S1 1632 chr3R 11601273 11601294 chr3R 11601357 11601378 10 84 4.5 0.0 2.2 3.1 105 chr3R 11601273 intron Jupiter - chr3R 11601326 intron Jupiter - chr3R 11601378 intron Jupiter - chr3R_10_11600001 chr3R_11600001 S1 1633 chr3R 11664792 11664822 chr3R 11664885 11664915 7 93 4.0 4.0 4.0 1.4 123 chr3R 11664792 intron CG42327 + chr3R 11664854 intron CG42327 + chr3R 11664915 intron CG42327 + chr3R_7_11660001 chr3R_11660001 S1 1634 chr3R 11694729 11694747 chr3R 11694823 11694841 4 94 3.0 3.0 3.0 1.0 112 chr3R 11694729 intergenic Fer3 - chr3R 11694785 intergenic Fer3 - chr3R 11694841 intergenic not near genes chr3R_4_11690001 chr3R_11690001 S1 1635 chr3R 11734161 11734188 chr3R 11734281 11734308 13 119 4.0 5.0 4.5 2.4 147 chr3R 11734161 intergenic not near genes chr3R 11734234 intergenic not near genes chr3R 11734308 intergenic not near genes chr3R_13_11730001 chr3R_11730001 S1 1636 chr3R 11841060 11841097 chr3R 11846252 11846289 BS 12 5192 7.0 1.5 4.2 2.3 5229 chr3R 11841060 intron CG6959 - chr3R 11843674 intron CG6959 - chr3R 11846289 intron CG6959 - chr3R_12_11840001 chr3R_11840001 S1 1637 chr3R 11853433 11853469 chr3R 11853583 11853617 5 149 2.0 3.0 2.5 1.4 184 chr3R 11853433 intron CG6959 - chr3R 11853525 intron CG6959 - chr3R 11853617 intron CG6959 - chr3R_5_11850001 chr3R_11850001 S1 1638 chr3R 11945614 11945629 chr3R 11945709 11945724 4 95 16.5 18.5 17.5 0.2 110 chr3R 11945614 intron Cad87A - chr3R 11945669 intron Cad87A - chr3R 11945724 intron Cad87A - chr3R_4_11945001 chr3R_11945001 S1 1639 chr3R 11957855 11957881 chr3R 11958139 11958165 S-element 6 284 3.0 0.0 1.5 2.4 310 chr3R 11957855 intergenic not near genes chr3R 11958010 intergenic not near genes chr3R 11958165 intergenic not near genes chr3R_6_11955001 chr3R_11955001 S1 1640 chr3R 11965168 11965200 chr3R 11965247 11965268 8 78 1.5 3.0 2.2 2.5 100 chr3R 11965168 3` UTR CG12213 - chr3R 11965218 3` UTR CG12213 - chr3R 11965268 3` UTR CG12213 - chr3R_8_11965001 chr3R_11965001 S1 1641 chr3R 12022884 12022915 chr3R 12025062 12025093 pogo 8 2178 4.0 4.5 4.2 1.5 2209 chr3R 12022884 intergenic not near genes chr3R 12023988 intergenic not near genes chr3R 12025093 intergenic not near genes chr3R_8_12020001 chr3R_12020001 S1 1642 chr3R 12202285 12202316 chr3R 12202395 12202426 10 110 2.5 3.0 2.8 2.6 141 chr3R 12202285 intergenic not near genes chr3R 12202356 intergenic not near genes chr3R 12202426 intergenic not near genes chr3R_10_12200001 chr3R_12200001 S1 1643 chr3R 12344134 12344147 chr3R 12344212 12344225 5 78 4.0 1.5 2.8 1.3 91 chr3R 12344134 intergenic not near genes chr3R 12344180 intergenic not near genes chr3R 12344225 intergenic not near genes chr3R_5_12340001 chr3R_12340001 S1 1644 chr3R 12392890 12392900 chr3R 12392991 12393001 8 101 3.0 10.5 6.8 1.0 111 chr3R 12392890 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R 12392946 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R 12393001 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R_8_12390001 chr3R_12390001 S1 1645 chr3R 12429957 12429983 chr3R 12430091 12430118 12 135 5.5 6.0 5.8 1.8 161 chr3R 12429957 exon CG5245 + chr3R 12430038 exon CG5245 + chr3R 12430118 exon CG5245 + chr3R_12_12430001 chr3R_12430001 S1 1646 chr3R 12569952 12569982 chr3R 12570034 12570064 10 79 2.0 4.0 3.0 2.5 112 chr3R 12569952 intron Octbeta2R - chr3R 12570008 intron Octbeta2R - chr3R 12570064 intron Octbeta2R - chr3R_10_12570001 chr3R_12570001 S1 1647 chr3R 12599382 12599407 chr3R 12599458 12599491 10 82 2.5 2.0 2.2 3.1 109 chr3R 12599382 intergenic not near genes chr3R 12599436 intergenic not near genes chr3R 12599491 intergenic not near genes chr3R_10_12595001 chr3R_12595001 S1 1648 chr3R 12733481 12733506 chr3R 12733559 12733584 11 78 5.5 6.5 6.0 1.6 103 chr3R 12733481 intergenic not near genes chr3R 12733532 intergenic not near genes chr3R 12733584 intergenic not near genes chr3R_11_12730001 chr3R_12730001 S1 1649 chr3R 12733853 12733887 chr3R 12733934 12733968 8 81 3.5 3.5 3.5 1.8 115 chr3R 12733853 intergenic not near genes chr3R 12733910 intergenic not near genes chr3R 12733968 intergenic not near genes chr3R_8_12730001 chr3R_12730001 S1 1650 chr3R 12753024 12753056 chr3R 12753110 12753142 9 86 1.0 2.0 1.5 3.6 118 chr3R 12753024 intron beat-Vc - chr3R 12753083 intron beat-Vc - chr3R 12753142 intron beat-Vc - chr3R_9_12750001 chr3R_12750001 S1 1651 chr3R 12786455 12786488 chr3R 12786814 12786847 8 359 0.5 1.5 1.0 4.0 392 chr3R 12786455 intergenic not near genes chr3R 12786651 intergenic not near genes chr3R 12786847 intergenic not near genes chr3R_8_12785001 chr3R_12785001 S1 1652 chr3R 12799041 12799059 chr3R 12799222 12799240 10 181 3.0 5.0 4.0 2.0 199 chr3R 12799041 intergenic not near genes chr3R 12799140 intergenic not near genes chr3R 12799240 intergenic not near genes chr3R_10_12795001 chr3R_12795001 S1 1653 chr3R 12825831 12825840 chr3R 12825912 12825921 6 81 8.0 8.0 8.0 0.7 90 chr3R 12825831 intergenic not near genes chr3R 12825876 intergenic not near genes chr3R 12825921 intergenic not near genes chr3R_6_12825001 chr3R_12825001 S1 1654 chr3R 12825842 12825852 chr3R 12825909 12825933 11 78 4.5 7.0 5.8 1.6 91 chr3R 12825842 intergenic not near genes chr3R 12825888 intergenic not near genes chr3R 12825933 intergenic not near genes chr3R_11_12825001 chr3R_12825001 S1 1655 chr3R 12866488 12866520 chr3R 12866640 12866672 8 152 3.0 3.0 3.0 2.0 184 chr3R 12866488 intergenic not near genes chr3R 12866580 intergenic not near genes chr3R 12866672 intergenic not near genes chr3R_8_12865001 chr3R_12865001 S1 1656 chr3R 12883793 12883822 chr3R 12883913 12883941 11 120 2.0 3.0 2.5 3.1 148 chr3R 12883793 intergenic not near genes chr3R 12883867 intergenic not near genes chr3R 12883941 intergenic not near genes chr3R_11_12880001 chr3R_12880001 S1 1657 chr3R 12920150 12920186 chr3R 12925354 12925390 copia 19 5203 4.5 5.5 5.0 3.2 5240 chr3R 12920150 intron beat-Vb + chr3R 12922770 intron beat-Vb + chr3R 12925390 intron beat-Vb + chr3R_19_12920001 chr3R_12920001 S1 1658 chr3R 12926726 12926747 chr3R 12926838 12926859 5 112 3.5 2.5 3.0 1.2 133 chr3R 12926726 intron beat-Vb + chr3R 12926792 intron beat-Vb + chr3R 12926859 intron beat-Vb + chr3R_5_12925001 chr3R_12925001 S1 1659 chr3R 12972554 12972581 chr3R 12972694 12972721 8 140 2.0 2.0 2.0 2.7 167 chr3R 12972554 intron CG7381 - chr3R 12972638 intron CG7381 - chr3R 12972721 intron CG7381 - chr3R_8_12970001 chr3R_12970001 S1 1660 chr3R 13059965 13059973 chr3R 13060161 13060169 4 196 4.5 4.5 4.5 0.7 204 chr3R 13059965 intron sim + chr3R 13060067 intron sim + chr3R 13060169 intron sim + chr3R_4_13060001 chr3R_13060001 S1 1661 chr3R 13075359 13075369 chr3R 13075441 13075451 4 82 2.5 3.0 2.8 1.1 92 chr3R 13075359 intron sim + chr3R 13075405 intron sim + chr3R 13075451 intron sim + chr3R_4_13075001 chr3R_13075001 S1 1662 chr3R 13120770 13120799 chr3R 13120848 13120877 8 78 4.0 3.5 3.8 1.7 107 chr3R 13120770 intron timeout + chr3R 13120824 intron timeout + chr3R 13120877 intron timeout + chr3R_8_13120001 chr3R_13120001 S1 1663 chr3R 13135825 13135859 chr3R 13138001 13138035 pogo 5 2176 3.5 1.5 2.5 1.4 2210 chr3R 13135825 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13136930 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138035 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_5_13135001 chr3R_13135001 S1 1664 chr3R 13143039 13143065 chr3R 13148616 13148642 mdg3 19 5576 2.5 4.5 3.5 4.2 5603 chr3R 13143039 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145840 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148642 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_19_13145001 chr3R_13145001 S1 1665 chr3R 13205408 13205443 chr3R 13205490 13205525 10 82 3.0 1.5 2.2 3.1 117 chr3R 13205408 intergenic not near genes chr3R 13205466 intergenic not near genes chr3R 13205525 intergenic not near genes chr3R_10_13205001 chr3R_13205001 S1 1666 chr3R 13314107 13314129 chr3R 13318896 13318918 Doc 7 4789 2.5 6.5 4.5 1.3 4811 chr3R 13314107 intergenic not near genes chr3R 13316512 intergenic not near genes chr3R 13318918 intergenic CG45080 - chr3R_7_13315001 chr3R_13315001 S1 1667 chr3R 13349008 13349035 chr3R 13349085 13349112 9 77 0.5 3.0 1.8 3.2 104 chr3R 13349008 intergenic not near genes chr3R 13349060 intergenic not near genes chr3R 13349112 intergenic not near genes chr3R_9_13345001 chr3R_13345001 S1 1668 chr3R 13372325 13372353 chr3R 13372486 13372514 6 160 4.0 2.5 3.2 1.4 189 chr3R 13372325 intergenic CG34309 +,Lip3 - chr3R 13372420 intergenic CG34309 + chr3R 13372514 intergenic CG34309 + chr3R_6_13370001 chr3R_13370001 S1 1669 chr3R 13408454 13408475 chr3R 13408531 13408552 8 76 1.0 1.5 1.2 3.6 98 chr3R 13408454 intergenic not near genes chr3R 13408503 intergenic not near genes chr3R 13408552 intergenic not near genes chr3R_8_13405001 chr3R_13405001 S1 1670 chr3R 13534379 13534413 chr3R 13534470 13534504 14 91 2.5 2.5 2.5 4.0 125 chr3R 13534379 intergenic not near genes chr3R 13534442 intergenic not near genes chr3R 13534504 intergenic not near genes chr3R_14_13530001 chr3R_13530001 S1 1671 chr3R 13571531 13571551 chr3R 13571609 13571629 5 78 2.0 2.5 2.2 1.6 98 chr3R 13571531 intergenic not near genes chr3R 13571580 intergenic not near genes chr3R 13571629 intergenic not near genes chr3R_5_13570001 chr3R_13570001 S1 1672 chr3R 13598087 13598116 chr3R 13598166 13598195 9 79 3.5 4.5 4.0 1.8 108 chr3R 13598087 intergenic not near genes chr3R 13598141 intergenic not near genes chr3R 13598195 intergenic not near genes chr3R_9_13595001 chr3R_13595001 S1 1673 chr3R 13603055 13603074 chr3R 13603147 13603166 7 92 2.0 2.0 2.0 2.3 111 chr3R 13603055 intergenic not near genes chr3R 13603110 intergenic not near genes chr3R 13603166 intergenic not near genes chr3R_7_13600001 chr3R_13600001 S1 1674 chr3R 13609567 13609581 chr3R 13609662 13609676 4 94 0.0 3.0 1.5 1.6 109 chr3R 13609567 intergenic CG9759 - chr3R 13609622 intergenic CG9759 - chr3R 13609676 intergenic CG9759 - chr3R_4_13605001 chr3R_13605001 S1 1675 chr3R 13659724 13659849 chr3R 13659831 13659939 5 97 0.0 0.0 0.0 5.0 215 chr3R 13659724 intron Hrb87F - chr3R 13659832 intron Hrb87F - chr3R 13659939 intron Hrb87F - chr3R_5_13655001 chr3R_13655001 S1 1676 chr3R 13693028 13693028 chr3R 21907534 21907536 7 8214507 15.0 20.0 17.5 0.4 8214508 chr3R 13693028 3` UTR flfl + chr3R 17800282 exon CG17803 - chr3R 21907536 intergenic CG6678 + chr3R_7_17800001 chr3R_17800001 S1 1677 chr3R 13709757 13709788 chr3R 13709960 13709991 7 202 2.5 1.5 2.0 2.3 234 chr3R 13709757 exon CG31469 - chr3R 13709874 intron CG31469 - chr3R 13709991 intergenic primo-1 -,primo-2 -,CG31469 - chr3R_7_13705001 chr3R_13705001 S1 1678 chr3R 13835606 13835613 chr3R 13835699 13835706 4 93 0.0 6.0 3.0 1.0 100 chr3R 13835606 intron Nsf2 - chr3R 13835656 intron Nsf2 - chr3R 13835706 intron Nsf2 - chr3R_4_13835001 chr3R_13835001 S1 1679 chr3R 13850327 13850338 chr3R 13850416 13850427 5 89 0.0 5.5 2.8 1.3 100 chr3R 13850327 intergenic not near genes chr3R 13850377 intergenic not near genes chr3R 13850427 intergenic not near genes chr3R_5_13850001 chr3R_13850001 S1 1680 chr3R 13863682 13863699 chr3R 13863771 13863788 7 87 3.0 5.0 4.0 1.4 106 chr3R 13863682 intergenic not near genes chr3R 13863735 intergenic not near genes chr3R 13863788 intergenic not near genes chr3R_7_13860001 chr3R_13860001 S1 1681 chr3R 14194425 14194461 chr3R 14203575 14203611 roo 6 9149 5.5 5.0 5.2 1.0 9186 chr3R 14194425 intron Dop1R1 - chr3R 14199018 intron Dop1R1 - chr3R 14203611 intron Dop1R1 - chr3R_6_14195001 chr3R_14195001 S1 1682 chr3R 15162559 15162574 chr3R 15167327 15167342 F-element 9 4768 5.0 3.5 4.2 1.7 4783 chr3R 15162559 intron Gyc88E + chr3R 15164950 intron Gyc88E + chr3R 15167342 intron Gyc88E + chr3R_9_15160001 chr3R_15160001 S1 1683 chr3R 15401271 15401292 chr3R 15406173 15406194 10 4902 16.0 23.0 19.5 0.5 4923 chr3R 15401271 3` UTR Rbp + chr3R 15403732 exon CG6125 - chr3R 15406194 intron CG6125 - chr3R_10_15400001 chr3R_15400001 S1 1684 chr3R 15416247 15416280 chr3R 15416327 15416360 10 81 4.5 5.0 4.8 1.7 113 chr3R 15416247 3` UTR Atx2 + chr3R 15416304 3` UTR Atx2 + chr3R 15416360 3` UTR Atx2 + chr3R_10_15415001 chr3R_15415001 S1 1685 chr3R 15585302 15585320 chr3R 15585403 15585421 13 100 1.0 5.5 3.2 3.1 119 chr3R 15585302 intergenic not near genes chr3R 15585362 intergenic not near genes chr3R 15585421 intergenic not near genes chr3R_13_15585001 chr3R_15585001 S1 1686 chr3R 15585321 15585332 chr3R 15585401 15585433 6 98 0.5 5.0 2.8 1.6 112 chr3R 15585321 intergenic not near genes chr3R 15585377 intergenic not near genes chr3R 15585433 intergenic not near genes chr3R_6_15585001 chr3R_15585001 S1 1687 chr3R 15601168 15601181 chr3R 15608691 15608704 412 6 7523 6.5 4.0 5.2 1.0 7536 chr3R 15601168 intergenic not near genes chr3R 15604936 intergenic not near genes chr3R 15608704 intergenic not near genes chr3R_6_15600001 chr3R_15600001 S1 1688 chr3R 15618729 15618762 chr3R 15626204 15626237 blood 11 7475 2.5 3.0 2.8 2.9 7508 chr3R 15618729 intergenic not near genes chr3R 15622483 intergenic not near genes chr3R 15626237 intergenic not near genes chr3R_11_15620001 chr3R_15620001 S1 1689 chr3R 15646790 15646797 chr3R 15646874 15646881 7 84 4.0 4.0 4.0 1.4 91 chr3R 15646790 intergenic not near genes chr3R 15646836 intergenic not near genes chr3R 15646881 intergenic not near genes chr3R_7_15645001 chr3R_15645001 S1 1690 chr3R 15692519 15692550 chr3R 15692599 15692630 9 80 1.0 2.5 1.8 3.2 111 chr3R 15692519 intergenic not near genes chr3R 15692574 intergenic not near genes chr3R 15692630 intergenic CG31446 + chr3R_9_15690001 chr3R_15690001 S1 1691 chr3R 15817255 15817267 chr3R 15818258 15818270 4 1003 0.5 3.5 2.0 1.3 1015 chr3R 15817255 intron alpha-Man-IIb + chr3R 15817762 intron alpha-Man-IIb + chr3R 15818270 intron alpha-Man-IIb + chr3R_4_15815001 chr3R_15815001 S1 1692 chr3R 15886679 15886708 chr3R 15887981 15888010 11 1302 22.0 11.0 16.5 0.6 1331 chr3R 15886679 intergenic not near genes chr3R 15887344 intergenic not near genes chr3R 15888010 intergenic not near genes chr3R_11_15885001 chr3R_15885001 S1 1693 chr3R 15912535 15912568 chr3R 15912649 15912682 25 114 5.0 7.0 6.0 3.6 147 chr3R 15912535 intron CG45105 - chr3R 15912608 intron CG45105 - chr3R 15912682 3` UTR CG45105 - chr3R_25_15910001 chr3R_15910001 S1 1694 chr3R 16013124 16013157 chr3R 16013213 16013246 11 89 3.5 4.0 3.8 2.3 122 chr3R 16013124 intron GATAe + chr3R 16013185 intron GATAe + chr3R 16013246 intron GATAe + chr3R_11_16010001 chr3R_16010001 S1 1695 chr3R 16246523 16246555 chr3R 16246600 16246632 10 77 0.0 4.5 2.2 3.1 109 chr3R 16246523 intron tara + chr3R 16246578 intron tara + chr3R 16246632 intron tara + chr3R_10_16245001 chr3R_16245001 S1 1696 chr3R 16374297 16374331 chr3R 16374415 16374449 14 118 2.5 5.0 3.8 2.9 152 chr3R 16374297 intergenic ss - chr3R 16374373 intergenic ss - chr3R 16374449 3` UTR ss - chr3R_14_16370001 chr3R_16370001 S1 1697 chr3R 16472579 16472597 chr3R 16472656 16472674 11 77 13.5 10.0 11.8 0.9 95 chr3R 16472579 intergenic Gyc-89Da + chr3R 16472626 5` UTR Gyc-89Da + chr3R 16472674 5` UTR Gyc-89Da + chr3R_11_16470001 chr3R_16470001 S1 1698 chr3R 16499554 16499570 chr3R 16499640 16499656 5 86 0.0 6.0 3.0 1.2 102 chr3R 16499554 intron decay - chr3R 16499605 intron decay - chr3R 16499656 intron decay - chr3R_5_16495001 chr3R_16495001 S1 1699 chr3R 16521205 16521233 chr3R 16521291 16521319 12 86 6.0 3.0 4.5 2.2 114 chr3R 16521205 intron CG42342 + chr3R 16521262 intron CG42342 + chr3R 16521319 intron CG42342 + chr3R_12_16520001 chr3R_16520001 S1 1700 chr3R 16582910 16582915 chr3R 16582990 16582995 5 80 11.5 11.5 11.5 0.4 85 chr3R 16582910 intron Scp2 - chr3R 16582952 intron Scp2 - chr3R 16582995 intron Scp2 - chr3R_5_16580001 chr3R_16580001 S1 1701 chr3R 16621516 16621553 chr3R 16621593 16621630 28 77 8.5 12.0 10.2 2.5 114 chr3R 16621516 exon CG14893 + chr3R 16621573 exon CG14893 + chr3R 16621630 exon CG14893 + chr3R_28_16620001 chr3R_16620001 S1 1702 chr3R 16705837 16705859 chr3R 16706157 16706179 6 320 4.5 3.5 4.0 1.2 342 chr3R 16705837 intron Ubx - chr3R 16706008 intron Ubx - chr3R 16706179 intron Ubx - chr3R_6_16705001 chr3R_16705001 S1 1703 chr3R 16756320 16756354 chr3R 16762512 16762546 diver 17 6192 3.0 5.5 4.2 3.3 6226 chr3R 16756320 intron bxd - chr3R 16759433 intron bxd - chr3R 16762546 intron bxd - chr3R_17_16755001 chr3R_16755001 S1 1704 chr3R 16856615 16856628 chr3R 16856725 16856738 4 110 1.0 0.0 0.5 2.7 123 chr3R 16856615 intron iab-8 - chr3R 16856676 intron iab-8 - chr3R 16856738 intron iab-8 - chr3R_4_16855001 chr3R_16855001 S1 1705 chr3R 16910470 16910506 chr3R 16910630 16910666 18 159 7.0 5.5 6.2 2.5 196 chr3R 16910470 intron iab-8 - chr3R 16910568 intron iab-8 - chr3R 16910666 intron iab-8 - chr3R_18_16910001 chr3R_16910001 S1 1706 chr3R 17066783 17066811 chr3R 17066872 17066900 10 89 1.0 2.5 1.8 3.6 117 chr3R 17066783 intron Dad + chr3R 17066842 intron Dad + chr3R 17066900 intron Dad + chr3R_10_17065001 chr3R_17065001 S1 1707 chr3R 17268674 17268697 chr3R 17268797 17268820 7 123 5.0 3.5 4.2 1.3 146 chr3R 17268674 intergenic not near genes chr3R 17268747 intergenic not near genes chr3R 17268820 intergenic not near genes chr3R_7_17265001 chr3R_17265001 S1 1708 chr3R 17290441 17290469 chr3R 17290528 17290556 7 87 2.5 3.0 2.8 1.8 115 chr3R 17290441 intergenic not near genes chr3R 17290498 intergenic not near genes chr3R 17290556 intergenic not near genes chr3R_7_17290001 chr3R_17290001 S1 1709 chr3R 17294667 17294702 chr3R 17295096 17295131 BS 6 429 3.0 3.5 3.2 1.4 464 chr3R 17294667 intergenic not near genes chr3R 17294899 intergenic not near genes chr3R 17295131 intergenic not near genes chr3R_6_17290001 chr3R_17290001 S1 1710 chr3R 17312815 17312845 chr3R 17312901 17312931 10 85 3.5 2.5 3.0 2.5 116 chr3R 17312815 intergenic not near genes chr3R 17312873 intergenic not near genes chr3R 17312931 intergenic not near genes chr3R_10_17310001 chr3R_17310001 S1 1711 chr3R 17346689 17346716 chr3R 17348253 17348280 F-element 9 1564 1.5 4.0 2.8 2.4 1591 chr3R 17346689 intron beat-IIa - chr3R 17347484 intron beat-IIa - chr3R 17348280 intron beat-IIa - chr3R_9_17345001 chr3R_17345001 S1 1712 chr3R 17355489 17355521 chr3R 17355568 17355582 16 76 2.5 4.0 3.2 3.8 93 chr3R 17355489 intron beat-IIa - chr3R 17355536 intron beat-IIa - chr3R 17355582 intron beat-IIa - chr3R_16_17355001 chr3R_17355001 S1 1713 chr3R 17461201 17461230 chr3R 17461284 17461313 7 83 2.0 2.0 2.0 2.3 112 chr3R 17461201 intergenic not near genes chr3R 17461257 intergenic not near genes chr3R 17461313 intergenic not near genes chr3R_7_17460001 chr3R_17460001 S1 1714 chr3R 17497960 17497991 chr3R 17498047 17498078 12 87 2.5 2.0 2.2 3.8 118 chr3R 17497960 intron Dscam3 - chr3R 17498019 intron Dscam3 - chr3R 17498078 intron Dscam3 - chr3R_12_17495001 chr3R_17495001 S1 1715 chr3R 17498849 17498877 chr3R 17498992 17499020 6 143 1.5 3.5 2.5 1.7 171 chr3R 17498849 intron Dscam3 - chr3R 17498934 intron Dscam3 - chr3R 17499020 intron Dscam3 - chr3R_6_17495001 chr3R_17495001 S1 1716 chr3R 17521571 17521573 chr3R 17521731 17521734 4 161 2.0 7.0 4.5 0.7 163 chr3R 17521571 intergenic not near genes chr3R 17521652 intergenic not near genes chr3R 17521734 intergenic not near genes chr3R_4_17520001 chr3R_17520001 S1 1717 chr3R 17521577 17521589 chr3R 17521727 17521750 4 158 1.0 6.5 3.8 0.8 173 chr3R 17521577 intergenic not near genes chr3R 17521664 intergenic not near genes chr3R 17521750 intergenic not near genes chr3R_4_17520001 chr3R_17520001 S1 1718 chr3R 17554351 17554390 chr3R 17554629 17554668 19 278 2.5 3.5 3.0 4.8 317 chr3R 17554351 intergenic not near genes chr3R 17554510 intergenic not near genes chr3R 17554668 intergenic not near genes chr3R_19_17550001 chr3R_17550001 S1 1719 chr3R 17591283 17591299 chr3R 17591720 17591736 F-element 8 437 9.0 5.0 7.0 1.0 453 chr3R 17591283 intergenic not near genes chr3R 17591510 intergenic not near genes chr3R 17591736 intergenic not near genes chr3R_8_17590001 chr3R_17590001 S1 1720 chr3R 17638329 17638351 chr3R 17638804 17638838 roo 5 485 5.0 2.5 3.8 1.0 509 chr3R 17638329 intron CG43175 + chr3R 17638584 intron CG43175 + chr3R 17638838 intron,intron CG43175 +,CR45222 + chr3R_5_17635001 chr3R_17635001 S1 1721 chr3R 17647242 17647273 chr3R 17647340 17647371 7 96 4.5 1.0 2.8 1.8 129 chr3R 17647242 intergenic CG14322 + chr3R 17647306 intergenic CG14322 + chr3R 17647371 intergenic CG14322 + chr3R_7_17645001 chr3R_17645001 S1 1722 chr3R 17702169 17702201 chr3R 17702249 17702281 15 80 4.0 4.0 4.0 3.0 112 chr3R 17702169 intron osa - chr3R 17702225 intron osa - chr3R 17702281 intron osa - chr3R_15_17700001 chr3R_17700001 S1 1723 chr3R 17925861 17925888 chr3R 17927329 17927356 hobo 10 1468 4.5 7.0 5.8 1.5 1495 chr3R 17925861 intron cpo + chr3R 17926608 intron cpo + chr3R 17927356 intron cpo + chr3R_10_17925001 chr3R_17925001 S1 1724 chr3R 17983209 17983247 chr3R 17983286 17983324 9 76 3.0 1.0 2.0 3.0 115 chr3R 17983209 intron cpo + chr3R 17983266 intron cpo + chr3R 17983324 intron cpo + chr3R_9_17980001 chr3R_17980001 S1 1725 chr3R 18032786 18032798 chr3R 18040460 18040472 opus 5 7674 0.0 3.0 1.5 2.0 7686 chr3R 18032786 intergenic not near genes chr3R 18036629 intergenic not near genes chr3R 18040472 intergenic not near genes chr3R_5_18035001 chr3R_18035001 S1 1726 chr3R 18041752 18041772 chr3R 18041830 18041850 7 78 0.0 0.5 0.2 5.8 98 chr3R 18041752 intergenic not near genes chr3R 18041801 intergenic not near genes chr3R 18041850 intergenic not near genes chr3R_7_18040001 chr3R_18040001 S1 1727 chr3R 18068005 18068025 chr3R 18068088 18068108 6 83 0.0 3.5 1.8 2.1 103 chr3R 18068005 intergenic not near genes chr3R 18068056 intergenic not near genes chr3R 18068108 intergenic not near genes chr3R_6_18065001 chr3R_18065001 S1 1728 chr3R 18078152 18078178 chr3R 18078232 18078258 8 80 3.5 0.0 1.8 2.9 106 chr3R 18078152 intergenic not near genes chr3R 18078205 intergenic not near genes chr3R 18078258 intergenic not near genes chr3R_8_18075001 chr3R_18075001 S1 1729 chr3R 18119744 18119749 chr3R 18119822 18119827 4 78 4.0 1.5 2.8 1.1 83 chr3R 18119744 intron sr + chr3R 18119786 intron sr + chr3R 18119827 intron sr + chr3R_4_18115001 chr3R_18115001 S1 1730 chr3R 18331781 18331790 chr3R 18333276 18333285 hopper2 6 1495 5.5 5.5 5.5 0.9 1504 chr3R 18331781 3` UTR CG15803 - chr3R 18332533 intron CG15803 - chr3R 18333285 3` UTR CG15803 - chr3R_6_18330001 chr3R_18330001 S1 1731 chr3R 18341594 18341624 chr3R 18341684 18341715 10 91 2.5 2.5 2.5 2.9 121 chr3R 18341594 intron CG15803 - chr3R 18341654 intron CG15803 - chr3R 18341715 intron CG15803 - chr3R_10_18340001 chr3R_18340001 S1 1732 chr3R 18352572 18352609 chr3R 18352666 18352703 11 94 3.5 4.0 3.8 2.3 131 chr3R 18352572 intron CG15803 - chr3R 18352638 intron CG15803 - chr3R 18352703 intron CG15803 - chr3R_11_18350001 chr3R_18350001 S1 1733 chr3R 18472283 18472298 chr3R 18472385 18472400 4 102 2.5 0.5 1.5 1.6 117 chr3R 18472283 intron fru - chr3R 18472342 intron fru - chr3R 18472400 intron fru - chr3R_4_18470001 chr3R_18470001 S1 1734 chr3R 18501591 18501628 chr3R 18501673 18501710 14 82 3.5 2.5 3.0 3.5 119 chr3R 18501591 intron fru - chr3R 18501650 intron fru - chr3R 18501710 intron fru - chr3R_14_18500001 chr3R_18500001 S1 1735 chr3R 18606508 18606534 chr3R 18610741 18610767 F-element 11 4233 2.5 3.0 2.8 2.9 4259 chr3R 18606508 intron,intron qin +,CG14304 - chr3R 18608638 intron,intron qin +,CG14304 - chr3R 18610767 intron,intron qin +,CG14304 - chr3R_11_18605001 chr3R_18605001 S1 1736 chr3R 18617710 18617730 chr3R 18617791 18617811 9 81 1.0 0.5 0.8 5.0 101 chr3R 18617710 intron,intron qin +,CG14304 - chr3R 18617760 intron,intron qin +,CG14304 - chr3R 18617811 intron,intron qin +,CG14304 - chr3R_9_18615001 chr3R_18615001 S1 1737 chr3R 18629031 18629034 chr3R 18629122 18629125 4 91 0.0 2.5 1.2 1.8 94 chr3R 18629031 intron qin + chr3R 18629078 intron qin + chr3R 18629125 intron qin + chr3R_4_18625001 chr3R_18625001 S1 1738 chr3R 18781692 18781727 chr3R 18781769 18781804 12 77 2.5 2.5 2.5 3.4 112 chr3R 18781692 intron CG7720 - chr3R 18781748 intron CG7720 - chr3R 18781804 intron CG7720 - chr3R_12_18780001 chr3R_18780001 S1 1739 chr3R 18791500 18791505 chr3R 18791580 18791585 4 80 3.0 0.5 1.8 1.4 85 chr3R 18791500 intron CG7720 - chr3R 18791542 intron CG7720 - chr3R 18791585 intron CG7720 - chr3R_4_18790001 chr3R_18790001 S1 1740 chr3R 18812074 18812108 chr3R 18812153 18812187 11 79 3.5 3.5 3.5 2.4 113 chr3R 18812074 intron CG18208 - chr3R 18812130 intron CG18208 - chr3R 18812187 intron CG18208 - chr3R_11_18810001 chr3R_18810001 S1 1741 chr3R 18817505 18817541 chr3R 18817604 18817640 7 99 0.5 1.5 1.0 3.5 135 chr3R 18817505 intron CG18208 - chr3R 18817572 intron CG18208 - chr3R 18817640 intron CG18208 - chr3R_7_18815001 chr3R_18815001 S1 1742 chr3R 18839810 18839835 chr3R 18839895 18839920 13 85 3.5 2.0 2.8 3.4 110 chr3R 18839810 intron CG18208 - chr3R 18839865 intron CG18208 - chr3R 18839920 intron CG18208 - chr3R_13_18835001 chr3R_18835001 S1 1743 chr3R 18856492 18856525 chr3R 18856662 18856695 20 170 6.0 3.5 4.8 3.4 203 chr3R 18856492 intergenic not near genes chr3R 18856594 intergenic not near genes chr3R 18856695 intergenic not near genes chr3R_20_18855001 chr3R_18855001 S1 1744 chr3R 18863167 18863189 chr3R 18863254 18863276 7 87 0.0 2.5 1.2 3.2 109 chr3R 18863167 intergenic not near genes chr3R 18863222 intergenic not near genes chr3R 18863276 intergenic not near genes chr3R_7_18860001 chr3R_18860001 S1 1745 chr3R 18892126 18892156 chr3R 18892208 18892237 5 81 1.5 2.5 2.0 1.7 111 chr3R 18892126 intergenic not near genes chr3R 18892182 intergenic not near genes chr3R 18892237 intergenic not near genes chr3R_5_18890001 chr3R_18890001 S1 1746 chr3R 18942609 18942620 chr3R 18942678 18942705 5 77 5.0 1.0 3.0 1.2 96 chr3R 18942609 intron CG42613 + chr3R 18942657 intron CG42613 + chr3R 18942705 intron CG42613 + chr3R_5_18940001 chr3R_18940001 S1 1747 chr3R 19193002 19193014 chr3R 19197282 19197319 F-element 6 4301 1.0 3.5 2.2 1.9 4317 chr3R 19193002 intron CG31475 + chr3R 19195160 intron CG31475 + chr3R 19197319 intron CG31475 + chr3R_6_19195001 chr3R_19195001 S1 1748 chr3R 19280551 19280580 chr3R 19280628 19280657 8 77 3.5 3.5 3.5 1.8 106 chr3R 19280551 intergenic not near genes chr3R 19280604 intergenic not near genes chr3R 19280657 intergenic not near genes chr3R_8_19280001 chr3R_19280001 S1 1749 chr3R 19369509 19369517 chr3R 19369597 19369605 4 88 0.0 2.0 1.0 2.0 96 chr3R 19369509 intron Ino80 - chr3R 19369557 intron Ino80 - chr3R 19369605 intron Ino80 - chr3R_4_19365001 chr3R_19365001 S1 1750 chr3R 19418415 19418436 chr3R 19418508 19418529 6 93 2.0 2.5 2.2 1.9 114 chr3R 19418415 intron CG31221 + chr3R 19418472 intron CG31221 + chr3R 19418529 intron CG31221 + chr3R_6_19415001 chr3R_19415001 S1 1751 chr3R 19490440 19490468 chr3R 19490530 19490558 12 90 3.5 2.0 2.8 3.2 118 chr3R 19490440 intron,exon Dys +,CG15025 - chr3R 19490499 intron,intron Dys +,CG15025 - chr3R 19490558 intron,intron Dys +,CG15025 - chr3R_12_19490001 chr3R_19490001 S1 1752 chr3R 19678487 19678519 chr3R 19678580 19678612 12 93 4.0 2.0 3.0 3.0 125 chr3R 19678487 intron Naam + chr3R 19678550 intron Naam + chr3R 19678612 intron Naam + chr3R_12_19675001 chr3R_19675001 S1 1753 chr3R 19702324 19702351 chr3R 19702401 19702425 11 82 3.5 3.5 3.5 2.4 101 chr3R 19702324 intergenic not near genes chr3R 19702374 intergenic not near genes chr3R 19702425 intergenic not near genes chr3R_11_19700001 chr3R_19700001 S1 1754 chr3R 19908286 19908302 chr3R 19908371 19908387 5 85 0.0 7.0 3.5 1.1 101 chr3R 19908286 intron RhoGAP92B + chr3R 19908336 intron RhoGAP92B + chr3R 19908387 intron RhoGAP92B + chr3R_5_19905001 chr3R_19905001 S1 1755 chr3R 19943879 19943900 chr3R 19943960 19943981 11 81 2.0 0.0 1.0 5.5 102 chr3R 19943879 intron Hs6st - chr3R 19943930 intron Hs6st - chr3R 19943981 intron Hs6st - chr3R_11_19940001 chr3R_19940001 S1 1756 chr3R 19987190 19987220 chr3R 19987272 19987302 9 82 1.5 4.5 3.0 2.2 112 chr3R 19987190 intron Hs6st - chr3R 19987246 intron Hs6st - chr3R 19987302 intron Hs6st - chr3R_9_19985001 chr3R_19985001 S1 1757 chr3R 20008829 20008853 chr3R 20008911 20008935 11 82 1.0 6.0 3.5 2.4 106 chr3R 20008829 intergenic MED25 +,Hs6st - chr3R 20008882 intergenic MED25 +,Hs6st - chr3R 20008935 intergenic MED25 +,Hs6st - chr3R_11_20005001 chr3R_20005001 S1 1758 chr3R 20060632 20060655 chr3R 20060716 20060739 6 84 4.5 1.5 3.0 1.5 107 chr3R 20060632 intergenic not near genes chr3R 20060686 intergenic not near genes chr3R 20060739 intergenic not near genes chr3R_6_20060001 chr3R_20060001 S1 1759 chr3R 20077038 20077055 chr3R 20077125 20077142 8 87 6.5 3.5 5.0 1.3 104 chr3R 20077038 intergenic not near genes chr3R 20077090 intergenic not near genes chr3R 20077142 intergenic not near genes chr3R_8_20075001 chr3R_20075001 S1 1760 chr3R 20077058 20077071 chr3R 20077122 20077158 4 81 3.0 3.0 3.0 1.0 100 chr3R 20077058 intergenic not near genes chr3R 20077108 intergenic not near genes chr3R 20077158 intergenic not near genes chr3R_4_20075001 chr3R_20075001 S1 1761 chr3R 20078835 20078868 chr3R 20078997 20079030 8 162 2.5 2.5 2.5 2.3 195 chr3R 20078835 intergenic not near genes chr3R 20078932 intergenic not near genes chr3R 20079030 intergenic not near genes chr3R_8_20075001 chr3R_20075001 S1 1762 chr3R 20109549 20109566 chr3R 20114756 20114773 copia 5 5207 2.5 5.5 4.0 1.0 5224 chr3R 20109549 intergenic not near genes chr3R 20112161 intergenic not near genes chr3R 20114773 intergenic CG10887 + chr3R_5_20110001 chr3R_20110001 S1 1763 chr3R 20156690 20156718 chr3R 20165861 20165889 roo 8 9171 4.5 2.5 3.5 1.8 9199 chr3R 20156690 intergenic not near genes chr3R 20161290 intergenic not near genes chr3R 20165889 intergenic not near genes chr3R_8_20160001 chr3R_20160001 S1 1764 chr3R 20173762 20173796 chr3R 20173854 20173860 17 87 2.5 1.5 2.0 5.7 98 chr3R 20173762 intron CG5023 + chr3R 20173811 intron CG5023 + chr3R 20173860 intron CG5023 + chr3R_17_20170001 chr3R_20170001 S1 1765 chr3R 20252223 20252253 chr3R 20252302 20252332 7 79 0.0 1.0 0.5 4.7 109 chr3R 20252223 intergenic not near genes chr3R 20252278 intergenic cic + chr3R 20252332 intergenic cic + chr3R_7_20250001 chr3R_20250001 S1 1766 chr3R 20256844 20256865 chr3R 20256923 20256944 6 79 0.0 5.5 2.8 1.6 100 chr3R 20256844 intron cic + chr3R 20256894 intron cic + chr3R 20256944 intron cic + chr3R_6_20255001 chr3R_20255001 S1 1767 chr3R 20282282 20282301 chr3R 20282359 20282378 5 77 0.0 2.0 1.0 2.5 96 chr3R 20282282 intron cic + chr3R 20282330 intron cic + chr3R 20282378 intron cic + chr3R_5_20280001 chr3R_20280001 S1 1768 chr3R 20286151 20286182 chr3R 20286259 20286290 8 108 2.0 0.5 1.2 3.6 139 chr3R 20286151 intron cic + chr3R 20286220 intron cic + chr3R 20286290 intron cic + chr3R_8_20285001 chr3R_20285001 S1 1769 chr3R 20308192 20308205 chr3R 20308281 20308294 5 89 1.5 0.0 0.8 2.8 102 chr3R 20308192 intergenic not near genes chr3R 20308243 intergenic not near genes chr3R 20308294 intergenic not near genes chr3R_5_20305001 chr3R_20305001 S1 1770 chr3R 20349470 20349505 chr3R 20350308 20350343 10 838 2.5 2.5 2.5 2.9 873 chr3R 20349470 intergenic not near genes chr3R 20349906 intergenic not near genes chr3R 20350343 intergenic not near genes chr3R_10_20345001 chr3R_20345001 S1 1771 chr3R 20375844 20375879 chr3R 20375934 20375971 9 91 2.0 3.5 2.8 2.4 127 chr3R 20375844 intergenic not near genes chr3R 20375908 intergenic not near genes chr3R 20375971 intergenic not near genes chr3R_9_20375001 chr3R_20375001 S1 1772 chr3R 20406492 20406517 chr3R 20406592 20406617 7 100 0.5 0.0 0.2 5.8 125 chr3R 20406492 intron Gfrl - chr3R 20406554 intron Gfrl - chr3R 20406617 intron,3` UTR Gfrl -,CG4335 - chr3R_7_20405001 chr3R_20405001 S1 1773 chr3R 20442846 20442871 chr3R 20442987 20443012 11 141 2.5 3.5 3.0 2.8 166 chr3R 20442846 intron Gfrl - chr3R 20442929 intron Gfrl - chr3R 20443012 intron Gfrl - chr3R_11_20440001 chr3R_20440001 S1 1774 chr3R 20453645 20453669 chr3R 20453750 20453774 15 104 6.0 10.5 8.2 1.6 129 chr3R 20453645 intron Gfrl - chr3R 20453710 intron Gfrl - chr3R 20453774 intron Gfrl - chr3R_15_20450001 chr3R_20450001 S1 1775 chr3R 20478404 20478436 chr3R 20478491 20478523 16 86 3.5 4.0 3.8 3.3 119 chr3R 20478404 intron Gfrl - chr3R 20478464 intron Gfrl - chr3R 20478523 intron Gfrl - chr3R_16_20475001 chr3R_20475001 S1 1776 chr3R 20506586 20506612 chr3R 20507390 20507416 BS 10 804 1.5 3.5 2.5 2.9 830 chr3R 20506586 intergenic Or92a + chr3R 20507001 intergenic CG4288 - chr3R 20507416 3` UTR CG4288 - chr3R_10_20505001 chr3R_20505001 S1 1777 chr3R 20513024 20513030 chr3R 20515728 20515734 opus 4 2704 1.0 3.0 2.0 1.3 2710 chr3R 20513024 intergenic not near genes chr3R 20514379 intergenic not near genes chr3R 20515734 intergenic not near genes chr3R_4_20510001 chr3R_20510001 S1 1778 chr3R 20594485 20594512 chr3R 20594576 20594603 5 91 1.0 0.0 0.5 3.3 118 chr3R 20594485 intron bon + chr3R 20594544 intron bon + chr3R 20594603 intron bon + chr3R_5_20590001 chr3R_20590001 S1 1779 chr3R 20601869 20601874 chr3R 20601953 20601958 4 84 3.0 0.0 1.5 1.6 89 chr3R 20601869 intron bon + chr3R 20601914 intron bon + chr3R 20601958 intron bon + chr3R_4_20600001 chr3R_20600001 S1 1780 chr3R 20617499 20617516 chr3R 20617769 20617786 4 270 0.0 0.0 0.0 4.0 287 chr3R 20617499 intergenic CG5466 + chr3R 20617642 intergenic CG5466 + chr3R 20617786 intergenic CG5466 + chr3R_4_20615001 chr3R_20615001 S1 1781 chr3R 20707747 20707771 chr3R 20707963 20707982 7 215 2.5 1.5 2.0 2.3 235 chr3R 20707747 intron Oamb - chr3R 20707864 intron Oamb - chr3R 20707982 intron Oamb - chr3R_7_20705001 chr3R_20705001 S1 1782 chr3R 20730929 20731057 chr3R 20731029 20731146 7 92 0.0 0.0 0.0 7.0 217 chr3R 20730929 intergenic not near genes chr3R 20731038 intergenic not near genes chr3R 20731146 intergenic CG31205 + chr3R_7_20730001 chr3R_20730001 S1 1783 chr3R 20771706 20771731 chr3R 20771788 20771813 9 81 0.0 4.0 2.0 3.0 107 chr3R 20771706 intron,intron Syp +,Takl1 - chr3R 20771760 intron,intron Syp +,Takl1 - chr3R 20771813 intron,exon Syp +,Takl1 - chr3R_9_20770001 chr3R_20770001 S1 1784 chr3R 20787446 20787457 chr3R 20787529 20787549 6 90 6.5 2.5 4.5 1.1 103 chr3R 20787446 intron Syp + chr3R 20787498 intron Syp + chr3R 20787549 intron Syp + chr3R_6_20785001 chr3R_20785001 S1 1785 chr3R 20854482 20854511 chr3R 20859273 20859281 Doc 5 4783 5.0 2.5 3.8 1.0 4799 chr3R 20854482 intron Ir93a - chr3R 20856882 intron Ir93a - chr3R 20859281 exon Ir93a - chr3R_5_20855001 chr3R_20855001 S1 1786 chr3R 20870248 20870278 chr3R 20870334 20870364 11 86 5.0 4.0 4.5 2.0 116 chr3R 20870248 intergenic not near genes chr3R 20870306 intergenic not near genes chr3R 20870364 intergenic not near genes chr3R_11_20870001 chr3R_20870001 S1 1787 chr3R 20901343 20901377 chr3R 20901430 20901464 13 87 4.0 5.5 4.8 2.2 121 chr3R 20901343 intergenic not near genes chr3R 20901404 intergenic not near genes chr3R 20901464 intergenic CG5621 + chr3R_13_20900001 chr3R_20900001 S1 1788 chr3R 20915163 20915180 chr3R 20915252 20915269 5 89 3.0 3.5 3.2 1.2 106 chr3R 20915163 intron,intron CG31191 -,hdly + chr3R 20915216 intron,intron CG31191 -,hdly + chr3R 20915269 intron,intron CG31191 -,hdly + chr3R_5_20915001 chr3R_20915001 S1 1789 chr3R 21014016 21014045 chr3R 21014095 21014124 10 79 2.0 3.5 2.8 2.6 108 chr3R 21014016 3` UTR Calx + chr3R 21014070 3` UTR Calx + chr3R 21014124 3` UTR Calx + chr3R_10_21010001 chr3R_21010001 S1 1790 chr3R 21074811 21074827 chr3R 21075033 21075049 7 222 2.5 3.5 3.0 1.8 238 chr3R 21074811 intron dmrt93B + chr3R 21074930 intron dmrt93B + chr3R 21075049 intron dmrt93B + chr3R_7_21070001 chr3R_21070001 S1 1791 chr3R 21108038 21108058 chr3R 21108300 21108320 6 262 2.5 2.5 2.5 1.7 282 chr3R 21108038 intergenic Sec15 -,rtet + chr3R 21108179 intergenic Sec15 -,rtet + chr3R 21108320 intergenic rtet +,Sec15 - chr3R_6_21105001 chr3R_21105001 S1 1792 chr3R 21141672 21141705 chr3R 21150154 21150187 Tirant 16 8482 8.5 10.0 9.2 1.6 8515 chr3R 21141672 intron SNF4Agamma + chr3R 21145930 intron SNF4Agamma + chr3R 21150187 intron SNF4Agamma + chr3R_16_21145001 chr3R_21145001 S1 1793 chr3R 21154546 21154585 chr3R 21154752 21154801 15 213 5.0 0.0 2.5 4.3 255 chr3R 21154546 intron SNF4Agamma + chr3R 21154674 intron SNF4Agamma + chr3R 21154801 intron SNF4Agamma + chr3R_15_21150001 chr3R_21150001 S1 1794 chr3R 21240448 21240477 chr3R 21240541 21240570 13 93 2.5 4.5 3.5 2.9 122 chr3R 21240448 intergenic not near genes chr3R 21240509 intergenic not near genes chr3R 21240570 intergenic not near genes chr3R_13_21240001 chr3R_21240001 S1 1795 chr3R 21472022 21472033 chr3R 21472104 21472115 5 82 4.0 6.0 5.0 0.8 93 chr3R 21472022 intergenic not near genes chr3R 21472068 intergenic not near genes chr3R 21472115 intergenic not near genes chr3R_5_21470001 chr3R_21470001 S1 1796 chr3R 21519029 21519038 chr3R 21519113 21519113 6 83 8.0 6.0 7.0 0.8 84 chr3R 21519029 intergenic not near genes chr3R 21519071 intergenic not near genes chr3R 21519113 intergenic not near genes chr3R_6_21515001 chr3R_21515001 S1 1797 chr3R 21519041 21519053 chr3R 21519112 21519125 8 78 6.5 6.0 6.2 1.1 84 chr3R 21519041 intergenic not near genes chr3R 21519083 intergenic not near genes chr3R 21519125 intergenic not near genes chr3R_8_21515001 chr3R_21515001 S1 1798 chr3R 21519977 21520137 chr3R 21520079 21520232 7 98 1.0 0.5 0.8 3.9 255 chr3R 21519977 intergenic not near genes chr3R 21520104 intergenic not near genes chr3R 21520232 intergenic not near genes chr3R_7_21520001 chr3R_21520001 S1 1799 chr3R 21628153 21628187 chr3R 21628247 21628281 10 94 3.0 1.0 2.0 3.3 128 chr3R 21628153 intron E2f - chr3R 21628217 intron E2f - chr3R 21628281 intron E2f - chr3R_10_21625001 chr3R_21625001 S1 1800 chr3R 21651246 21651256 chr3R 21651325 21651335 4 79 5.0 2.0 3.5 0.9 89 chr3R 21651246 intron E2f - chr3R 21651290 intron E2f - chr3R 21651335 intron E2f - chr3R_4_21650001 chr3R_21650001 S1 1801 chr3R 8339246 8339247 chr3R 21907534 21907534 25 13568287 19.5 20.0 19.8 1.2 13568288 chr3R 8339246 intergenic not near genes chr3R 15123390 intron CG42788 - chr3R 21907534 intergenic CG6678 + chr3R_25_15120001 chr3R_15120001 S1 1802 chr3R 9620954 9620956 chr3R 21907534 21907534 9 12286578 8.0 20.0 14.0 0.6 12286580 chr3R 9620954 intron CG8312 + chr3R 15764244 intergenic not near genes chr3R 21907534 intergenic CG6678 + chr3R_9_15760001 chr3R_15760001 S1 1803 chr3R 15286987 15286988 chr3R 21907534 21907534 4 6620546 13.5 20.0 16.8 0.2 6620547 chr3R 15286987 intron Tm1 + chr3R 18597260 intron,exon qin +,CG14304 - chr3R 21907534 intergenic CG6678 + chr3R_4_18595001 chr3R_18595001 S1 1804 chr3R 21907534 21907534 chr3R 28831801 28831802 30 6924267 18.0 21.0 19.5 1.5 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_30_25365001 chr3R_25365001 S1 1805 chr3R 8339246 8339247 chr3R 21907535 21907535 15 13568289 19.5 20.0 19.8 0.7 13568289 chr3R 8339246 intergenic not near genes chr3R 15123390 intron CG42788 - chr3R 21907535 intergenic CG6678 + chr3R_15_15120001 chr3R_15120001 S1 1806 chr3R 9620954 9620957 chr3R 21907535 21907535 12 12286579 8.0 20.0 14.0 0.8 12286581 chr3R 9620954 intron CG8312 + chr3R 15764244 intergenic not near genes chr3R 21907535 intergenic CG6678 + chr3R_12_15760001 chr3R_15760001 S1 1807 chr3R 21907535 21907535 chr3R 28831801 28831802 49 6924267 18.5 21.0 19.8 2.4 6924267 chr3R 21907535 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_49_25365001 chr3R_25365001 S1 1808 chr3R 9620956 9620956 chr3R 21907536 21907536 4 12286580 8.0 20.0 14.0 0.3 12286580 chr3R 9620956 intron CG8312 + chr3R 15764246 intergenic not near genes chr3R 21907536 intergenic CG6678 + chr3R_4_15760001 chr3R_15760001 S1 1809 chr3R 21907536 21907536 chr3R 28831801 28831802 24 6924266 19.0 21.0 20.0 1.1 6924266 chr3R 21907536 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831802 intron WASp - chr3R_24_25365001 chr3R_25365001 S1 1810 chr3R 22057519 22057536 chr3R 22057598 22057615 4 79 1.5 1.0 1.2 1.8 96 chr3R 22057519 intron how + chr3R 22057567 intron how + chr3R 22057615 intron how + chr3R_4_22055001 chr3R_22055001 S1 1811 chr3R 22061520 22061549 chr3R 22061654 22061683 7 134 4.5 2.0 3.2 1.7 163 chr3R 22061520 intron how + chr3R 22061602 intron how + chr3R 22061683 intron how + chr3R_7_22060001 chr3R_22060001 S1 1812 chr3R 22144603 22144632 chr3R 22144794 22144824 6 192 2.5 4.0 3.2 1.4 221 chr3R 22144603 intron SKIP + chr3R 22144714 intron SKIP + chr3R 22144824 intron SKIP + chr3R_6_22140001 chr3R_22140001 S1 1813 chr3R 22234681 22234715 chr3R 22236001 22236035 pogo 6 1320 2.0 3.5 2.8 1.6 1354 chr3R 22234681 intron SKIP + chr3R 22235358 intron SKIP + chr3R 22236035 intron SKIP + chr3R_6_22235001 chr3R_22235001 S1 1814 chr3R 22437796 22437808 chr3R 22437887 22437899 6 91 3.0 1.0 2.0 2.0 103 chr3R 22437796 intergenic not near genes chr3R 22437848 intergenic not near genes chr3R 22437899 intergenic not near genes chr3R_6_22435001 chr3R_22435001 S1 1815 chr3R 22437809 22437815 chr3R 22437882 22437906 4 86 3.0 1.0 2.0 1.3 97 chr3R 22437809 intergenic not near genes chr3R 22437858 intergenic not near genes chr3R 22437906 intergenic not near genes chr3R_4_22435001 chr3R_22435001 S1 1816 chr3R 22450541 22450579 chr3R 22453182 22453220 NOF 15 2641 4.5 4.0 4.2 2.9 2679 chr3R 22450541 intron CG34376 + chr3R 22451880 intron CG34376 + chr3R 22453220 intron CG34376 + chr3R_15_22450001 chr3R_22450001 S1 1817 chr3R 22538440 22538474 chr3R 22538526 22538560 10 86 2.0 4.0 3.0 2.5 120 chr3R 22538440 intron CG5326 - chr3R 22538500 intron CG5326 - chr3R 22538560 intron CG5326 - chr3R_10_22535001 chr3R_22535001 S1 1818 chr3R 22590772 22590805 chr3R 22590851 22590884 8 79 3.5 3.0 3.2 1.9 112 chr3R 22590772 intron Efa6 + chr3R 22590828 intron Efa6 + chr3R 22590884 intron Efa6 + chr3R_8_22590001 chr3R_22590001 S1 1819 chr3R 22597374 22597394 chr3R 22597452 22597472 7 77 4.5 4.0 4.2 1.3 98 chr3R 22597374 intron Efa6 + chr3R 22597423 intron Efa6 + chr3R 22597472 intron Efa6 + chr3R_7_22595001 chr3R_22595001 S1 1820 chr3R 22803437 22803466 chr3R 22803629 22803658 10 192 14.0 5.5 9.8 0.9 221 chr3R 22803437 intergenic not near genes chr3R 22803548 intergenic not near genes chr3R 22803658 intergenic not near genes chr3R_10_22800001 chr3R_22800001 S1 1821 chr3R 22846789 22846823 chr3R 22847011 22847045 15 222 3.5 3.5 3.5 3.3 256 chr3R 22846789 intergenic CG4704 - chr3R 22846917 intergenic not near genes chr3R 22847045 intergenic not near genes chr3R_15_22845001 chr3R_22845001 S1 1822 chr3R 22927693 22927728 chr3R 22927778 22927813 10 85 1.5 4.0 2.8 2.6 120 chr3R 22927693 intron klg + chr3R 22927753 intron klg + chr3R 22927813 intron klg + chr3R_10_22925001 chr3R_22925001 S1 1823 chr3R 22974284 22974306 chr3R 22974369 22974385 10 84 1.0 0.5 0.8 5.6 101 chr3R 22974284 intergenic not near genes chr3R 22974334 intergenic not near genes chr3R 22974385 intergenic not near genes chr3R_10_22970001 chr3R_22970001 S1 1824 chr3R 23005724 23005752 chr3R 23005807 23005835 10 83 5.5 7.0 6.2 1.4 111 chr3R 23005724 intron CG34375 - chr3R 23005780 intron CG34375 - chr3R 23005835 intron CG34375 - chr3R_10_23005001 chr3R_23005001 S1 1825 chr3R 23073660 23073679 chr3R 23073750 23073769 9 90 16.0 11.5 13.8 0.6 109 chr3R 23073660 intron CG13830 - chr3R 23073714 intron CG13830 - chr3R 23073769 intron CG13830 - chr3R_9_23070001 chr3R_23070001 S1 1826 chr3R 23152513 23152543 chr3R 23152594 23152624 7 81 6.5 7.5 7.0 0.9 111 chr3R 23152513 3` UTR unk - chr3R 23152568 3` UTR unk - chr3R 23152624 3` UTR unk - chr3R_7_23150001 chr3R_23150001 S1 1827 chr3R 23197962 23197977 chr3R 23198042 23198057 4 80 3.5 2.5 3.0 1.0 95 chr3R 23197962 exon cnc - chr3R 23198010 intron cnc - chr3R 23198057 intron cnc - chr3R_4_23195001 chr3R_23195001 S1 1828 chr3R 23245988 23246024 chr3R 23246071 23246107 17 81 1.5 4.5 3.0 4.2 119 chr3R 23245988 intron CG4467 - chr3R 23246048 intron CG4467 - chr3R 23246107 intron CG4467 - chr3R_17_23245001 chr3R_23245001 S1 1829 chr3R 23314062 23314069 chr3R 23314140 23314143 4 77 5.5 2.0 3.8 0.8 81 chr3R 23314062 intron pnt - chr3R 23314102 intron pnt - chr3R 23314143 intron pnt - chr3R_4_23310001 chr3R_23310001 S1 1830 chr3R 23324031 23324057 chr3R 23324118 23324144 8 87 3.0 2.0 2.5 2.3 113 chr3R 23324031 intron pnt - chr3R 23324088 intron pnt - chr3R 23324144 intron pnt - chr3R_8_23320001 chr3R_23320001 S1 1831 chr3R 23363691 23363725 chr3R 23363985 23364019 14 294 1.0 2.5 1.8 5.0 328 chr3R 23363691 intergenic CG4408 - chr3R 23363855 intergenic CG4408 - chr3R 23364019 intergenic CG4408 - chr3R_14_23360001 chr3R_23360001 S1 1832 chr3R 23497961 23497975 chr3R 23498046 23498060 9 84 2.5 6.5 4.5 1.6 99 chr3R 23497961 intergenic not near genes chr3R 23498010 intergenic not near genes chr3R 23498060 intergenic not near genes chr3R_9_23495001 chr3R_23495001 S1 1833 chr3R 23558399 23558429 chr3R 23560181 23560211 Bari1 11 1782 1.0 3.5 2.2 3.4 1812 chr3R 23558399 intron beat-IV + chr3R 23559305 intron beat-IV + chr3R 23560211 intron beat-IV + chr3R_11_23555001 chr3R_23555001 S1 1834 chr3R 23572750 23572778 chr3R 23572871 23572899 18 120 5.5 5.0 5.2 2.9 149 chr3R 23572750 intron beat-IV + chr3R 23572824 intron beat-IV + chr3R 23572899 intron beat-IV + chr3R_18_23570001 chr3R_23570001 S1 1835 chr3R 3586630 3586637 chr3R 23642150 23642169 7 20055522 28.5 13.0 20.8 0.3 20055539 chr3R 3586630 intron Parp - chr3R 13614400 intergenic not near genes chr3R 23642169 intron CG31145 - chr3R_7_13610001 chr3R_13610001 S1 1836 chr3R 23650248 23650276 chr3R 23650373 23650401 7 125 2.0 0.0 1.0 3.5 153 chr3R 23650248 intron CG31145 - chr3R 23650324 intron CG31145 - chr3R 23650401 intron CG31145 - chr3R_7_23650001 chr3R_23650001 S1 1837 chr3R 23684693 23684730 chr3R 23685180 23685217 roo 26 486 5.0 6.0 5.5 4.0 524 chr3R 23684693 exon CG18754 + chr3R 23684955 intron CG18754 + chr3R 23685217 exon CG18754 + chr3R_26_23680001 chr3R_23680001 S1 1838 chr3R 23688472 23688496 chr3R 23688564 23688566 7 89 4.5 4.5 4.5 1.3 94 chr3R 23688472 intergenic SPE + chr3R 23688519 intergenic SPE +,CG10254 - chr3R 23688566 intergenic SPE +,CG10254 - chr3R_7_23685001 chr3R_23685001 S1 1839 chr3R 23820637 23820667 chr3R 23820722 23820752 8 85 1.5 4.0 2.8 2.1 115 chr3R 23820637 5` UTR CG34355 + chr3R 23820694 5` UTR CG34355 + chr3R 23820752 5` UTR CG34355 + chr3R_8_23820001 chr3R_23820001 S1 1840 chr3R 23835402 23835424 chr3R 23844553 23844575 roo 5 9151 2.5 0.0 1.2 2.3 9173 chr3R 23835402 intron CG34355 + chr3R 23839988 intron CG34355 + chr3R 23844575 intron CG34355 + chr3R_5_23835001 chr3R_23835001 S1 1841 chr3R 23865029 23865064 chr3R 23865119 23865153 17 90 4.5 3.0 3.8 3.5 124 chr3R 23865029 intron Pli - chr3R 23865091 intron Pli - chr3R 23865153 intron Pli - chr3R_17_23865001 chr3R_23865001 S1 1842 chr3R 23944910 23944928 chr3R 23944996 23945014 11 86 3.0 4.0 3.5 2.4 104 chr3R 23944910 intron CG12268 - chr3R 23944962 intron CG12268 - chr3R 23945014 intron CG12268 - chr3R_11_23940001 chr3R_23940001 S1 1843 chr3R 24021625 24021645 chr3R 24021715 24021736 10 91 2.5 5.0 3.8 2.1 111 chr3R 24021625 intron KrT95D - chr3R 24021680 intron KrT95D - chr3R 24021736 intron KrT95D - chr3R_10_24020001 chr3R_24020001 S1 1844 chr3R 24042093 24042125 chr3R 24042259 24042290 12 166 2.0 2.5 2.2 3.8 197 chr3R 24042093 3` UTR spas + chr3R 24042192 3` UTR spas + chr3R 24042290 3` UTR spas + chr3R_12_24040001 chr3R_24040001 S1 1845 chr3R 24072083 24072100 chr3R 24072522 24072539 jockey 11 439 8.5 0.0 4.2 2.1 456 chr3R 24072083 intron 4EHP - chr3R 24072311 intron 4EHP - chr3R 24072539 intron 4EHP - chr3R_11_24070001 chr3R_24070001 S1 1846 chr3R 24076914 24076946 chr3R 24078382 24078414 hobo 9 1467 2.5 2.5 2.5 2.6 1500 chr3R 24076914 intron 4EHP - chr3R 24077664 intron 4EHP - chr3R 24078414 intron 4EHP - chr3R_9_24075001 chr3R_24075001 S1 1847 chr3R 24100636 24100661 chr3R 24100727 24100752 6 91 3.0 1.5 2.2 1.9 116 chr3R 24100636 intron 4EHP - chr3R 24100694 intron 4EHP - chr3R 24100752 intron 4EHP - chr3R_6_24100001 chr3R_24100001 S1 1848 chr3R 24119873 24119908 chr3R 24120048 24120083 13 173 2.0 5.0 3.5 2.9 210 chr3R 24119873 intron Rootletin + chr3R 24119978 intron Rootletin + chr3R 24120083 intron Rootletin + chr3R_13_24115001 chr3R_24115001 S1 1849 chr3R 24173947 24173979 chr3R 24175554 24175585 19 1606 1.5 5.0 3.2 4.5 1638 chr3R 24173947 intron CG13606 + chr3R 24174766 intron CG13606 + chr3R 24175585 intron CG13606 + chr3R_19_24170001 chr3R_24170001 S1 1850 chr3R 24199738 24199771 chr3R 24199819 24199852 8 80 3.5 2.5 3.0 2.0 114 chr3R 24199738 intron twin - chr3R 24199795 intron twin - chr3R 24199852 intron twin - chr3R_8_24195001 chr3R_24195001 S1 1851 chr3R 24207220 24207244 chr3R 24212297 24212321 flea 10 5077 6.5 9.0 7.8 1.1 5101 chr3R 24207220 intron twin - chr3R 24209770 intron twin - chr3R 24212321 intron twin - chr3R_10_24205001 chr3R_24205001 S1 1852 chr3R 24385871 24385904 chr3R 24385965 24385998 22 93 2.0 3.0 2.5 6.3 127 chr3R 24385871 intergenic CG5768 - chr3R 24385934 intergenic CG5768 - chr3R 24385998 intergenic CG5768 - chr3R_22_24385001 chr3R_24385001 S1 1853 chr3R 21907535 21907536 chr3R 24389465 24389465 6 2481930 19.0 13.0 16.0 0.4 2481930 chr3R 21907535 intergenic CG6678 + chr3R 23148500 intergenic not near genes chr3R 24389465 intron CG5768 - chr3R_6_23145001 chr3R_23145001 S1 1854 chr3R 24426285 24426314 chr3R 24426543 24426572 7 258 4.0 1.5 2.8 1.8 287 chr3R 24426285 intron nAChRalpha1 - chr3R 24426428 intron nAChRalpha1 - chr3R 24426572 intron nAChRalpha1 - chr3R_7_24425001 chr3R_24425001 S1 1855 chr3R 24431599 24431627 chr3R 24431679 24431706 10 80 4.0 0.5 2.2 3.1 107 chr3R 24431599 intron nAChRalpha1 - chr3R 24431652 intron nAChRalpha1 - chr3R 24431706 intron nAChRalpha1 - chr3R_10_24430001 chr3R_24430001 S1 1856 chr3R 24730091 24730119 chr3R 24732469 24732498 Doc 11 2379 1.5 0.0 0.8 6.1 2407 chr3R 24730091 intron tok + chr3R 24731294 intron tok + chr3R 24732498 intron tok + chr3R_11_24730001 chr3R_24730001 S1 1857 chr3R 24912479 24912504 chr3R 24912562 24912587 8 83 3.5 2.5 3.0 2.0 108 chr3R 24912479 intergenic not near genes chr3R 24912533 intergenic CR44267 + chr3R 24912587 intergenic CR44267 + chr3R_8_24910001 chr3R_24910001 S1 1858 chr3R 24927135 24927146 chr3R 24931927 24931938 Doc 4 4792 6.5 5.0 5.8 0.6 4803 chr3R 24927135 intergenic Trf4-2 + chr3R 24929536 intergenic not near genes chr3R 24931938 intergenic CG11771 + chr3R_4_24925001 chr3R_24925001 S1 1859 chr3R 25004899 25004919 chr3R 25004983 25005003 9 84 0.5 4.5 2.5 2.6 104 chr3R 25004899 intron tnc + chr3R 25004951 intron tnc + chr3R 25005003 intron tnc + chr3R_9_25000001 chr3R_25000001 S1 1860 chr3R 25027536 25027565 chr3R 25027750 25027779 8 214 2.5 3.5 3.0 2.0 243 chr3R 25027536 intron Hr96 + chr3R 25027658 intron Hr96 + chr3R 25027779 intron Hr96 + chr3R_8_25025001 chr3R_25025001 S1 1861 chr3R 25053426 25053462 chr3R 25053504 25053540 11 77 2.5 5.5 4.0 2.2 114 chr3R 25053426 3` UTR CG31109 - chr3R 25053483 3` UTR CG31109 - chr3R 25053540 3` UTR CG31109 - chr3R_11_25050001 chr3R_25050001 S1 1862 chr3R 25072756 25072787 chr3R 25072849 25072880 12 92 1.0 5.0 3.0 3.0 124 chr3R 25072756 3` UTR CG9996 - chr3R 25072818 3` UTR CG9996 - chr3R 25072880 3` UTR CG9996 - chr3R_12_25070001 chr3R_25070001 S1 1863 chr3R 25082252 25082267 chr3R 25082330 25082344 6 78 1.0 3.5 2.2 1.9 92 chr3R 25082252 intergenic fd96Ca + chr3R 25082298 intergenic fd96Ca + chr3R 25082344 intergenic fd96Ca + chr3R_6_25080001 chr3R_25080001 S1 1864 chr3R 25136402 25136420 chr3R 25136483 25136501 6 81 1.5 2.0 1.8 2.1 99 chr3R 25136402 3` UTR Bili + chr3R 25136452 3` UTR Bili + chr3R 25136501 3` UTR Bili + chr3R_6_25135001 chr3R_25135001 S1 1865 chr3R 25145439 25145463 chr3R 25145571 25145595 7 132 4.5 2.5 3.5 1.6 156 chr3R 25145439 intergenic not near genes chr3R 25145517 intergenic not near genes chr3R 25145595 intergenic not near genes chr3R_7_25145001 chr3R_25145001 S1 1866 chr3R 25159510 25159541 chr3R 25159599 25159630 10 89 2.5 4.5 3.5 2.2 120 chr3R 25159510 intergenic not near genes chr3R 25159570 intergenic not near genes chr3R 25159630 intergenic not near genes chr3R_10_25155001 chr3R_25155001 S1 1867 chr3R 25520985 25520991 chr3R 25521085 25521091 4 100 6.0 4.5 5.2 0.6 106 chr3R 25520985 intron msi + chr3R 25521038 intron msi + chr3R 25521091 intron msi + chr3R_4_25520001 chr3R_25520001 S1 1868 chr3R 25534998 25535029 chr3R 25535089 25535120 8 91 2.0 7.0 4.5 1.5 122 chr3R 25534998 intron msi + chr3R 25535059 intron msi + chr3R 25535120 intron msi + chr3R_8_25535001 chr3R_25535001 S1 1869 chr3R 25559483 25559511 chr3R 25559575 25559607 9 95 4.0 2.0 3.0 2.2 124 chr3R 25559483 intron msi + chr3R 25559545 intron msi + chr3R 25559607 intron msi + chr3R_9_25555001 chr3R_25555001 S1 1870 chr3R 25576834 25576869 chr3R 25576934 25576969 8 99 2.5 2.0 2.2 2.5 135 chr3R 25576834 intron msi + chr3R 25576902 intron msi + chr3R 25576969 intron msi + chr3R_8_25575001 chr3R_25575001 S1 1871 chr3R 25689126 25689159 chr3R 25689235 25689268 12 109 4.5 4.0 4.2 2.3 142 chr3R 25689126 intergenic not near genes chr3R 25689197 intergenic not near genes chr3R 25689268 intergenic not near genes chr3R_12_25685001 chr3R_25685001 S1 1872 chr3R 25725847 25725862 chr3R 25735008 25735023 roo 5 9161 1.0 5.0 3.0 1.2 9176 chr3R 25725847 intron LpR2 - chr3R 25730435 intron LpR2 - chr3R 25735023 intron LpR2 - chr3R_5_25730001 chr3R_25730001 S1 1873 chr3R 25832693 25832720 chr3R 25841875 25841903 roo 16 9183 5.5 7.5 6.5 2.1 9210 chr3R 25832693 exon alpha4GT2 + chr3R 25837298 intron alpha4GT2 + chr3R 25841903 exon alpha4GT2 + chr3R_16_25835001 chr3R_25835001 S1 1874 chr3R 25869208 25869241 chr3R 25869403 25869436 9 195 4.0 2.0 3.0 2.2 228 chr3R 25869208 intron CG5890 + chr3R 25869322 intron CG5890 + chr3R 25869436 intron CG5890 + chr3R_9_25865001 chr3R_25865001 S1 1875 chr3R 25900878 25900914 chr3R 25903594 25903630 18 2716 33.0 22.0 27.5 0.6 2752 chr3R 25900878 exon CG31091 + chr3R 25902254 intergenic CG31091 +,CG31089 + chr3R 25903630 exon,intron CG31089 +,CR43259 - chr3R_18_25900001 chr3R_25900001 S1 1876 chr3R 26108831 26108841 chr3R 26117408 26117425 Tirant 4 8582 0.5 2.5 1.5 1.6 8594 chr3R 26108831 5` UTR CG31324 + chr3R 26113128 intron CG31324 + chr3R 26117425 intron CG31324 + chr3R_4_26110001 chr3R_26110001 S1 1877 chr3R 26122465 26122480 chr3R 26122542 26122557 7 76 1.0 5.5 3.2 1.7 92 chr3R 26122465 intron CG31324 + chr3R 26122511 intron CG31324 + chr3R 26122557 intron CG31324 + chr3R_7_26120001 chr3R_26120001 S1 1878 chr3R 26140517 26140547 chr3R 26140630 26140661 6 113 2.5 4.0 3.2 1.4 144 chr3R 26140517 intergenic not near genes chr3R 26140589 intergenic not near genes chr3R 26140661 intergenic not near genes chr3R_6_26140001 chr3R_26140001 S1 1879 chr3R 26144445 26144482 chr3R 26144524 26144561 10 79 1.5 2.0 1.8 3.6 116 chr3R 26144445 intergenic not near genes chr3R 26144503 intergenic not near genes chr3R 26144561 intergenic not near genes chr3R_10_26140001 chr3R_26140001 S1 1880 chr3R 26159707 26159739 chr3R 26159798 26159830 12 91 2.0 4.5 3.2 2.9 123 chr3R 26159707 intergenic not near genes chr3R 26159768 intergenic not near genes chr3R 26159830 intergenic not near genes chr3R_12_26155001 chr3R_26155001 S1 1881 chr3R 26171083 26171100 chr3R 26171177 26171194 5 94 2.5 2.5 2.5 1.4 111 chr3R 26171083 intron CG31323 + chr3R 26171138 intron CG31323 + chr3R 26171194 intron CG31323 + chr3R_5_26170001 chr3R_26170001 S1 1882 chr3R 26233603 26233610 chr3R 26233858 26233865 4 255 5.0 5.5 5.2 0.6 262 chr3R 26233603 3` UTR CG12290 + chr3R 26233734 3` UTR CG12290 + chr3R 26233865 3` UTR CG12290 + chr3R_4_26230001 chr3R_26230001 S1 1883 chr3R 26239828 26239855 chr3R 26240140 26240149 9 310 1.5 1.0 1.2 4.1 321 chr3R 26239828 intron CR42745 + chr3R 26239988 intron CR42745 + chr3R 26240149 intron CR42745 + chr3R_9_26235001 chr3R_26235001 S1 1884 chr3R 26292102 26292138 chr3R 26292183 26292219 10 81 3.0 2.5 2.8 2.6 117 chr3R 26292102 intergenic not near genes chr3R 26292160 intergenic not near genes chr3R 26292219 intergenic not near genes chr3R_10_26290001 chr3R_26290001 S1 1885 chr3R 26294715 26294748 chr3R 26294794 26294827 10 79 2.0 4.0 3.0 2.5 112 chr3R 26294715 intergenic not near genes chr3R 26294771 intergenic not near genes chr3R 26294827 intergenic not near genes chr3R_10_26290001 chr3R_26290001 S1 1886 chr3R 26325681 26325707 chr3R 26325770 26325796 17 88 5.5 4.0 4.8 2.9 115 chr3R 26325681 intron CG33970 + chr3R 26325738 intron CG33970 + chr3R 26325796 intron CG33970 + chr3R_17_26325001 chr3R_26325001 S1 1887 chr3R 26338335 26338340 chr3R 26338429 26338434 4 94 5.0 0.5 2.8 1.1 99 chr3R 26338335 intron CG33970 + chr3R 26338384 intron CG33970 + chr3R 26338434 intron CG33970 + chr3R_4_26335001 chr3R_26335001 S1 1888 chr3R 26374845 26374857 chr3R 26374948 26374960 4 103 4.5 2.5 3.5 0.9 115 chr3R 26374845 intergenic not near genes chr3R 26374902 intergenic not near genes chr3R 26374960 intergenic not near genes chr3R_4_26370001 chr3R_26370001 S1 1889 chr3R 26376327 26376358 chr3R 26385487 26385519 roo 12 9160 4.5 0.0 2.2 3.8 9192 chr3R 26376327 intergenic not near genes chr3R 26380923 intergenic not near genes chr3R 26385519 intergenic not near genes chr3R_12_26380001 chr3R_26380001 S1 1890 chr3R 26456639 26456676 chr3R 26456718 26456755 11 79 3.5 3.5 3.5 2.4 116 chr3R 26456639 intergenic CG14237 +,Pdf - chr3R 26456697 intergenic CG14237 + chr3R 26456755 intergenic CG14237 + chr3R_11_26455001 chr3R_26455001 S1 1891 chr3R 26510524 26510531 chr3R 26519580 26519587 roo 5 9056 4.5 2.0 3.2 1.2 9063 chr3R 26510524 intron plum - chr3R 26515056 intron plum - chr3R 26519587 intron,5` UTR plum -,CR45226 + chr3R_5_26515001 chr3R_26515001 S1 1892 chr3R 26542043 26542077 chr3R 26542135 26542158 12 90 2.0 2.0 2.0 4.0 115 chr3R 26542043 intron scrib + chr3R 26542100 intron scrib + chr3R 26542158 intron scrib + chr3R_12_26540001 chr3R_26540001 S1 1893 chr3R 26558325 26558361 chr3R 26565639 26565674 Stalker4 8 7313 3.0 6.0 4.5 1.5 7349 chr3R 26558325 intron scrib + chr3R 26562000 intron scrib + chr3R 26565674 intron scrib + chr3R_8_26560001 chr3R_26560001 S1 1894 chr3R 26607740 26607774 chr3R 26607816 26607851 18 77 1.5 4.0 2.8 4.7 111 chr3R 26607740 5` UTR CR44951 + chr3R 26607796 5` UTR CR44951 + chr3R 26607851 5` UTR CR44951 + chr3R_18_26605001 chr3R_26605001 S1 1895 chr3R 26616223 26616253 chr3R 26616313 26616343 5 90 2.5 2.0 2.2 1.6 120 chr3R 26616223 intergenic not near genes chr3R 26616283 intergenic not near genes chr3R 26616343 intergenic not near genes chr3R_5_26615001 chr3R_26615001 S1 1896 chr3R 26623295 26623301 chr3R 26625367 26625372 4 2071 14.5 25.5 20.0 0.2 2077 chr3R 26623295 exon TwdlB - chr3R 26624334 intergenic TwdlL - chr3R 26625372 exon TwdlL - chr3R_4_26620001 chr3R_26620001 S1 1897 chr3R 26641639 26641661 chr3R 26641727 26641749 18 88 4.5 3.5 4.0 3.6 110 chr3R 26641639 intergenic not near genes chr3R 26641694 intergenic not near genes chr3R 26641749 intergenic not near genes chr3R_18_26640001 chr3R_26640001 S1 1898 chr3R 26642732 26642760 chr3R 26643126 26643154 jockey 6 394 2.5 2.5 2.5 1.7 422 chr3R 26642732 intergenic not near genes chr3R 26642943 intergenic not near genes chr3R 26643154 intergenic not near genes chr3R_6_26640001 chr3R_26640001 S1 1899 chr3R 26685856 26685891 chr3R 26686037 26686072 17 180 1.5 5.5 3.5 3.8 216 chr3R 26685856 intergenic not near genes chr3R 26685964 intergenic not near genes chr3R 26686072 intergenic not near genes chr3R_17_26685001 chr3R_26685001 S1 1900 chr3R 26705391 26705406 chr3R 26705512 26705527 7 121 3.0 2.5 2.8 1.8 136 chr3R 26705391 intron amon - chr3R 26705459 intron amon - chr3R 26705527 intron amon - chr3R_7_26705001 chr3R_26705001 S1 1901 chr3R 26710827 26710855 chr3R 26710912 26710940 11 85 2.5 3.5 3.0 2.8 113 chr3R 26710827 intron amon - chr3R 26710884 intron amon - chr3R 26710940 intron amon - chr3R_11_26710001 chr3R_26710001 S1 1902 chr3R 26740307 26740318 chr3R 26740384 26740395 5 77 0.0 2.0 1.0 2.5 88 chr3R 26740307 intergenic not near genes chr3R 26740351 intergenic not near genes chr3R 26740395 intergenic not near genes chr3R_5_26740001 chr3R_26740001 S1 1903 chr3R 26753358 26753382 chr3R 26753447 26753471 10 89 1.5 3.5 2.5 2.9 113 chr3R 26753358 intergenic not near genes chr3R 26753414 intergenic not near genes chr3R 26753471 intergenic not near genes chr3R_10_26750001 chr3R_26750001 S1 1904 chr3R 26767362 26767397 chr3R 26767441 26767476 17 79 5.0 6.0 5.5 2.6 114 chr3R 26767362 intergenic not near genes chr3R 26767419 intergenic not near genes chr3R 26767476 intergenic not near genes chr3R_17_26765001 chr3R_26765001 S1 1905 chr3R 26770242 26770272 chr3R 26770320 26770350 10 78 3.0 2.5 2.8 2.6 108 chr3R 26770242 intergenic CR45563 + chr3R 26770296 intergenic CR45563 + chr3R 26770350 intergenic not near genes chr3R_10_26770001 chr3R_26770001 S1 1906 chr3R 26806136 26806172 chr3R 26806241 26806277 16 105 3.5 5.5 4.5 2.9 141 chr3R 26806136 intron Tl + chr3R 26806206 intron Tl + chr3R 26806277 intron Tl + chr3R_16_26805001 chr3R_26805001 S1 1907 chr3R 26816748 26816758 chr3R 26816842 26816852 4 94 5.0 9.5 7.2 0.5 104 chr3R 26816748 intron Tl + chr3R 26816800 intron Tl + chr3R 26816852 intron Tl + chr3R_4_26815001 chr3R_26815001 S1 1908 chr3R 26898638 26898642 chr3R 26899013 26899017 4 375 2.5 1.0 1.8 1.4 379 chr3R 26898638 intron T48 + chr3R 26898828 intron T48 + chr3R 26899017 intron T48 + chr3R_4_26895001 chr3R_26895001 S1 1909 chr3R 26908254 26908270 chr3R 26908412 26908428 8 158 4.5 12.5 8.5 0.8 174 chr3R 26908254 intron T48 + chr3R 26908341 intron T48 + chr3R 26908428 intron T48 + chr3R_8_26905001 chr3R_26905001 S1 1910 chr3R 27028720 27028753 chr3R 27028800 27028833 9 80 2.0 1.0 1.5 3.6 113 chr3R 27028720 intron RYa-R + chr3R 27028776 intron RYa-R + chr3R 27028833 intron RYa-R + chr3R_9_27025001 chr3R_27025001 S1 1911 chr3R 27041812 27041847 chr3R 27041903 27041938 14 91 3.5 1.5 2.5 4.0 126 chr3R 27041812 intron RYa-R + chr3R 27041875 intron RYa-R + chr3R 27041938 intron RYa-R + chr3R_14_27040001 chr3R_27040001 S1 1912 chr3R 27059097 27059129 chr3R 27059188 27059204 13 87 4.0 4.5 4.2 2.5 107 chr3R 27059097 exon Nep5 - chr3R 27059150 intron Nep5 - chr3R 27059204 intron Nep5 - chr3R_13_27055001 chr3R_27055001 S1 1913 chr3R 27077096 27077127 chr3R 27077177 27077208 7 81 5.5 3.0 4.2 1.3 112 chr3R 27077096 intron CG14257 + chr3R 27077152 intron CG14257 + chr3R 27077208 intron CG14257 + chr3R_7_27075001 chr3R_27075001 S1 1914 chr3R 27140516 27140544 chr3R 27148127 27148155 412 10 7611 6.5 2.5 4.5 1.8 7639 chr3R 27140516 intron CG6051 - chr3R 27144336 intron CG6051 - chr3R 27148155 intron CG6051 - chr3R_10_27140001 chr3R_27140001 S1 1915 chr3R 27342792 27342818 chr3R 27351373 27351400 Tirant 9 8581 2.5 2.0 2.2 2.8 8608 chr3R 27342792 intron CG42534 + chr3R 27347096 intron CG42534 + chr3R 27351400 intron CG42534 + chr3R_9_27345001 chr3R_27345001 S1 1916 chr3R 27457868 27457886 chr3R 27457961 27457976 5 91 7.0 0.5 3.8 1.0 108 chr3R 27457868 intergenic not near genes chr3R 27457922 intergenic not near genes chr3R 27457976 intergenic not near genes chr3R_5_27455001 chr3R_27455001 S1 1917 chr3R 27492379 27492410 chr3R 27492467 27492498 11 87 1.5 3.5 2.5 3.1 119 chr3R 27492379 intergenic not near genes chr3R 27492438 intergenic not near genes chr3R 27492498 intergenic not near genes chr3R_11_27490001 chr3R_27490001 S1 1918 chr3R 27521155 27521190 chr3R 27530365 27530400 roo 11 9210 2.0 2.0 2.0 3.7 9245 chr3R 27521155 intron CG12885 + chr3R 27525778 intron CG12885 + chr3R 27530400 intron CG12885 + chr3R_11_27525001 chr3R_27525001 S1 1919 chr3R 27706774 27706804 chr3R 27706852 27706882 9 78 4.5 3.0 3.8 1.9 108 chr3R 27706774 intergenic CG12428 -,CG12877 + chr3R 27706828 intergenic CG12428 -,CG12877 + chr3R 27706882 intergenic CG12428 -,CG12877 + chr3R_9_27705001 chr3R_27705001 S1 1920 chr3R 27718578 27718600 chr3R 27718658 27718680 13 80 4.0 5.5 4.8 2.2 102 chr3R 27718578 intergenic not near genes chr3R 27718629 intergenic not near genes chr3R 27718680 intergenic not near genes chr3R_13_27715001 chr3R_27715001 S1 1921 chr3R 27733036 27733068 chr3R 27733119 27733151 15 85 31.5 28.5 30.0 0.5 115 chr3R 27733036 intergenic not near genes chr3R 27733094 intergenic not near genes chr3R 27733151 intergenic not near genes chr3R_15_27730001 chr3R_27730001 S1 1922 chr3R 27752756 27752789 chr3R 27753142 27753175 10 386 2.5 1.5 2.0 3.3 419 chr3R 27752756 intergenic not near genes chr3R 27752966 intergenic not near genes chr3R 27753175 intergenic not near genes chr3R_10_27750001 chr3R_27750001 S1 1923 chr3R 27779270 27779287 chr3R 27779351 27779368 7 81 4.0 13.0 8.5 0.7 98 chr3R 27779270 exon CG34353 - chr3R 27779319 intron CG34353 - chr3R 27779368 intron CG34353 - chr3R_7_27775001 chr3R_27775001 S1 1924 chr3R 27789081 27789114 chr3R 27789159 27789192 12 78 4.5 3.5 4.0 2.4 111 chr3R 27789081 exon CG34353 - chr3R 27789136 intron CG34353 - chr3R 27789192 intron CG34353 - chr3R_12_27785001 chr3R_27785001 S1 1925 chr3R 27799935 27799964 chr3R 27800018 27800047 11 83 2.5 4.0 3.2 2.6 112 chr3R 27799935 intron CG34353 - chr3R 27799991 intron CG34353 - chr3R 27800047 intron CG34353 - chr3R_11_27795001 chr3R_27795001 S1 1926 chr3R 27841105 27841135 chr3R 27841187 27841217 5 82 3.5 2.0 2.8 1.3 112 chr3R 27841105 intron CG34353 - chr3R 27841161 intron CG34353 - chr3R 27841217 intron CG34353 - chr3R_5_27840001 chr3R_27840001 S1 1927 chr3R 27856757 27856792 chr3R 27858241 27858260 hopper2 9 1482 5.5 2.5 4.0 1.8 1503 chr3R 27856757 intron CG34353 - chr3R 27857508 intron CG34353 - chr3R 27858260 intron CG34353 - chr3R_9_27855001 chr3R_27855001 S1 1928 chr3R 27862952 27862987 chr3R 27868258 27868293 Transpac 12 5306 7.5 0.5 4.0 2.4 5341 chr3R 27862952 intron CG34353 - chr3R 27865622 intron CG34353 - chr3R 27868293 intron CG34353 - chr3R_12_27865001 chr3R_27865001 S1 1929 chr3R 27862567 27862602 chr3R 27873477 27873512 Transpac 5 10910 15.5 26.0 20.8 0.2 10945 chr3R 27862567 intron CG34353 - chr3R 27868040 intron CG34353 - chr3R 27873512 intron CG34353 - chr3R_5_27865001 chr3R_27865001 S1 1930 chr3R 27875698 27875729 chr3R 27882754 27882785 297 10 7056 4.0 3.5 3.8 2.1 7087 chr3R 27875698 intron CG34353 - chr3R 27879242 intron CG34353 - chr3R 27882785 intron CG34353 - chr3R_10_27875001 chr3R_27875001 S1 1931 chr3R 28035490 28035503 chr3R 28035568 28035580 6 78 2.0 3.0 2.5 1.7 90 chr3R 28035490 intron CG34362 + chr3R 28035535 intron CG34362 + chr3R 28035580 intron CG34362 + chr3R_6_28035001 chr3R_28035001 S1 1932 chr3R 28068492 28068527 chr3R 28073935 28073970 I-element 12 5443 3.5 4.0 3.8 2.5 5478 chr3R 28068492 intron CG34362 + chr3R 28071231 intron CG34362 + chr3R 28073970 intron CG34362 + chr3R_12_28070001 chr3R_28070001 S1 1933 chr3R 28091423 28091446 chr3R 28091539 28091549 4 113 2.5 2.5 2.5 1.1 126 chr3R 28091423 intergenic not near genes chr3R 28091486 intergenic not near genes chr3R 28091549 intergenic not near genes chr3R_4_28090001 chr3R_28090001 S1 1934 chr3R 28103330 28103358 chr3R 28103422 28103451 8 94 3.0 7.0 5.0 1.3 121 chr3R 28103330 intergenic not near genes chr3R 28103390 intergenic not near genes chr3R 28103451 intergenic not near genes chr3R_8_28100001 chr3R_28100001 S1 1935 chr3R 28173667 28173705 chr3R 28181098 28181136 mdg1 7 7431 2.5 2.0 2.2 2.2 7469 chr3R 28173667 intron CG34354 + chr3R 28177402 intron CG34354 + chr3R 28181136 intron CG34354 + chr3R_7_28175001 chr3R_28175001 S1 1936 chr3R 28253339 28253370 chr3R 28255850 28255881 jockey 9 2511 3.5 3.5 3.5 2.0 2542 chr3R 28253339 intergenic not near genes chr3R 28254610 intergenic not near genes chr3R 28255881 intergenic not near genes chr3R_9_28250001 chr3R_28250001 S1 1937 chr3R 28302100 28302135 chr3R 28302540 28302575 jockey 12 440 4.0 4.5 4.2 2.3 475 chr3R 28302100 intergenic not near genes chr3R 28302338 intergenic not near genes chr3R 28302575 intergenic not near genes chr3R_12_28300001 chr3R_28300001 S1 1938 chr3R 28308070 28308082 chr3R 28308148 28308160 6 78 8.0 8.5 8.2 0.7 90 chr3R 28308070 intergenic not near genes chr3R 28308115 intergenic not near genes chr3R 28308160 intergenic not near genes chr3R_6_28305001 chr3R_28305001 S1 1939 chr3R 28331504 28331530 chr3R 28331584 28331610 5 80 0.0 1.0 0.5 3.3 106 chr3R 28331504 intron larp - chr3R 28331557 intron larp - chr3R 28331610 intron larp - chr3R_5_28330001 chr3R_28330001 S1 1940 chr3R 28352510 28352545 chr3R 28352851 28352886 18 341 2.5 5.5 4.0 3.6 376 chr3R 28352510 exon Or98b + chr3R 28352698 exon Or98b + chr3R 28352886 exon Or98b + chr3R_18_28350001 chr3R_28350001 S1 1941 chr3R 28407704 28407740 chr3R 28407791 28407827 10 87 5.0 4.0 4.5 1.8 123 chr3R 28407704 intergenic not near genes chr3R 28407766 intergenic not near genes chr3R 28407827 intergenic not near genes chr3R_10_28405001 chr3R_28405001 S1 1942 chr3R 28576368 28576401 chr3R 28576458 28576491 14 90 4.5 4.0 4.2 2.7 123 chr3R 28576368 intergenic not near genes chr3R 28576430 intergenic not near genes chr3R 28576491 intergenic not near genes chr3R_14_28575001 chr3R_28575001 S1 1943 chr3R 28616477 28616500 chr3R 28616572 28616595 7 95 1.0 5.0 3.0 1.8 118 chr3R 28616477 intron CG10011 - chr3R 28616536 intron CG10011 - chr3R 28616595 intron CG10011 - chr3R_7_28615001 chr3R_28615001 S1 1944 chr3R 28792874 28792897 chr3R 28797970 28797993 jockey 4 5096 2.0 5.5 3.8 0.8 5119 chr3R 28792874 intergenic not near genes chr3R 28795434 intergenic not near genes chr3R 28797993 intergenic not near genes chr3R_4_28795001 chr3R_28795001 S1 1945 chr3R 21907534 21907536 chr3R 28831801 28831802 84 6924266 19.0 21.0 20.0 4.0 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_84_25365001 chr3R_25365001 S1 1946 chr3R 29023236 29023260 chr3R 29023341 29023365 15 105 6.5 2.5 4.5 2.7 129 chr3R 29023236 5` UTR CR45567 + chr3R 29023300 5` UTR CR45567 + chr3R 29023365 5` UTR CR45567 + chr3R_15_29020001 chr3R_29020001 S1 1947 chr3R 29070056 29070079 chr3R 29070138 29070161 5 82 2.5 3.5 3.0 1.2 105 chr3R 29070056 intron CG11873 + chr3R 29070108 intron CG11873 + chr3R 29070161 intron CG11873 + chr3R_5_29070001 chr3R_29070001 S1 1948 chr3R 29079398 29079404 chr3R 29080771 29080777 NOF 4 1373 0.0 4.0 2.0 1.3 1379 chr3R 29079398 intron CG11873 + chr3R 29080088 intron CG11873 + chr3R 29080777 intron CG11873 + chr3R_4_29080001 chr3R_29080001 S1 1949 chr3R 29213058 29213093 chr3R 29213142 29213177 11 84 3.5 5.0 4.2 2.1 119 chr3R 29213058 intergenic not near genes chr3R 29213118 intergenic not near genes chr3R 29213177 intergenic not near genes chr3R_11_29210001 chr3R_29210001 S1 1950 chr3R 29237256 29237281 chr3R 29239278 29239303 7 2022 13.0 12.0 12.5 0.5 2047 chr3R 29237256 exon CG11951 - chr3R 29238280 intron CG11951 - chr3R 29239303 exon CG31427 - chr3R_7_29235001 chr3R_29235001 S1 1951 chr3R 29239237 29239246 chr3R 29245521 29245538 8 6291 8.5 25.0 16.8 0.4 6301 chr3R 29239237 exon CG31427 - chr3R 29242388 exon CG31445 - chr3R 29245538 exon SP1029 - chr3R_8_29240001 chr3R_29240001 S1 1952 chr3R 29240314 29240343 chr3R 29240399 29240428 8 85 2.0 0.5 1.2 3.6 114 chr3R 29240314 5` UTR CG31427 - chr3R 29240371 intergenic CG31427 -,CG31445 - chr3R 29240428 intergenic CG31427 -,CG31445 - chr3R_8_29240001 chr3R_29240001 S1 1953 chr3R 29256263 29256300 chr3R 29256344 29256381 24 81 3.5 3.5 3.5 5.3 118 chr3R 29256263 intergenic CG45544 +,stg - chr3R 29256322 intergenic CG45544 + chr3R 29256381 intergenic CG45544 + chr3R_24_29255001 chr3R_29255001 S1 1954 chr3R 29282806 29282816 chr3R 29282895 29282905 4 88 3.5 13.5 8.5 0.4 99 chr3R 29282806 intergenic not near genes chr3R 29282856 intergenic not near genes chr3R 29282905 intergenic not near genes chr3R_4_29280001 chr3R_29280001 S1 1955 chr3R 29319824 29319862 chr3R 29320144 29320180 jockey 8 320 3.0 3.0 3.0 2.0 356 chr3R 29319824 intergenic Cnx99A - chr3R 29320002 intergenic Cnx99A - chr3R 29320180 intergenic not near genes chr3R_8_29320001 chr3R_29320001 S1 1956 chr3R 29406615 29406647 chr3R 29407902 29407934 jockey 19 1284 4.0 8.0 6.0 2.7 1319 chr3R 29406615 intron Ptp99A + chr3R 29407274 intron Ptp99A + chr3R 29407934 intron Ptp99A + chr3R_19_29405001 chr3R_29405001 S1 1957 chr3R 29412018 29412029 chr3R 29412091 29412109 6 79 4.0 4.0 4.0 1.2 91 chr3R 29412018 intron Ptp99A + chr3R 29412064 intron Ptp99A + chr3R 29412109 intron Ptp99A + chr3R_6_29410001 chr3R_29410001 S1 1958 chr3R 29447281 29447312 chr3R 29447365 29447396 8 84 3.5 1.0 2.2 2.5 115 chr3R 29447281 intron Ptp99A + chr3R 29447338 intron Ptp99A + chr3R 29447396 intron Ptp99A + chr3R_8_29445001 chr3R_29445001 S1 1959 chr3R 29472012 29472040 chr3R 29472106 29472122 9 93 3.0 4.0 3.5 2.0 110 chr3R 29472012 intron Ptp99A + chr3R 29472067 intron Ptp99A + chr3R 29472122 intron Ptp99A + chr3R_9_29470001 chr3R_29470001 S1 1960 chr3R 29526234 29526263 chr3R 29526322 29526351 8 88 1.0 5.0 3.0 2.0 117 chr3R 29526234 intergenic not near genes chr3R 29526292 intergenic not near genes chr3R 29526351 intergenic not near genes chr3R_8_29525001 chr3R_29525001 S1 1961 chr3R 29539435 29539457 chr3R 29539512 29539534 12 77 2.0 0.0 1.0 6.0 99 chr3R 29539435 intergenic not near genes chr3R 29539484 intergenic not near genes chr3R 29539534 intergenic not near genes chr3R_12_29535001 chr3R_29535001 S1 1962 chr3R 29590374 29590404 chr3R 29590468 29590497 18 94 3.0 3.5 3.2 4.3 123 chr3R 29590374 intron CG31041 - chr3R 29590436 intron CG31041 - chr3R 29590497 intron CG31041 - chr3R_18_29590001 chr3R_29590001 S1 1963 chr3R 29592747 29592768 chr3R 29592826 29592847 6 79 1.5 1.0 1.2 2.7 100 chr3R 29592747 intron alph + chr3R 29592797 intron alph + chr3R 29592847 intron alph + chr3R_6_29590001 chr3R_29590001 S1 1964 chr3R 29738262 29738294 chr3R 29739730 29739762 hobo 8 1468 3.5 1.5 2.5 2.3 1500 chr3R 29738262 intergenic CG1969 +,CG7598 + chr3R 29739012 intron CG1969 + chr3R 29739762 5` UTR CG1969 + chr3R_8_29735001 chr3R_29735001 S1 1965 chr3R 29758936 29758964 chr3R 29759015 29759043 13 78 3.5 3.5 3.5 2.9 107 chr3R 29758936 3` UTR CR44953 - chr3R 29758990 3` UTR CR44953 - chr3R 29759043 intergenic CR44953 - chr3R_13_29755001 chr3R_29755001 S1 1966 chr3R 29760359 29760392 chr3R 29761561 29761594 pogo 10 1202 2.0 1.0 1.5 4.0 1235 chr3R 29760359 intergenic not near genes chr3R 29760976 intergenic not near genes chr3R 29761594 intergenic not near genes chr3R_10_29760001 chr3R_29760001 S1 1967 chr3R 29866286 29866317 chr3R 29866369 29866400 6 83 5.0 7.0 6.0 0.9 114 chr3R 29866286 intron Zip99C - chr3R 29866343 intron Zip99C - chr3R 29866400 intron Zip99C - chr3R_6_29865001 chr3R_29865001 S1 1968 chr3R 29882017 29882053 chr3R 29891175 29891211 roo 7 9158 1.0 3.5 2.2 2.2 9194 chr3R 29882017 intron CG31038 + chr3R 29886614 intron CG31038 + chr3R 29891211 intron CG31038 + chr3R_7_29885001 chr3R_29885001 S1 1969 chr3R 29950577 29950596 chr3R 29950654 29950674 5 75 0.5 4.5 2.5 1.4 97 chr3R 29950577 intergenic TkR99D - chr3R 29950626 intergenic TkR99D - chr3R 29950674 intergenic TkR99D - chr3R_5_29950001 chr3R_29950001 S1 1970 chr3R 29966061 29966075 chr3R 29966139 29966153 5 78 2.5 7.5 5.0 0.8 92 chr3R 29966061 intron TkR99D - chr3R 29966107 intron TkR99D - chr3R 29966153 intron TkR99D - chr3R_5_29965001 chr3R_29965001 S1 1971 chr3R 29976537 29976557 chr3R 29976750 29976770 5 210 2.0 1.5 1.8 1.8 233 chr3R 29976537 intergenic not near genes chr3R 29976654 intergenic not near genes chr3R 29976770 intergenic not near genes chr3R_5_29975001 chr3R_29975001 S1 1972 chr3R 30013677 30013706 chr3R 30013761 30013790 16 84 2.5 4.0 3.2 3.8 113 chr3R 30013677 intron CG7920 - chr3R 30013734 intron CG7920 - chr3R 30013790 intron CG7920 - chr3R_16_30010001 chr3R_30010001 S1 1973 chr3R 30032162 30032174 chr3R 30032242 30032254 6 80 5.5 2.5 4.0 1.2 92 chr3R 30032162 intron Axn + chr3R 30032208 intron Axn + chr3R 30032254 intron Axn + chr3R_6_30030001 chr3R_30030001 S1 1974 chr3R 30082990 30083008 chr3R 30083067 30083077 6 76 3.5 1.5 2.5 1.7 87 chr3R 30082990 intron sima + chr3R 30083034 intron sima + chr3R 30083077 intron sima + chr3R_6_30080001 chr3R_30080001 S1 1975 chr3R 30084849 30084875 chr3R 30086317 30086343 hobo 12 1468 3.5 2.5 3.0 3.0 1494 chr3R 30084849 intron sima + chr3R 30085596 intron sima + chr3R 30086343 intron sima + chr3R_12_30085001 chr3R_30085001 S1 1976 chr3R 30088612 30088632 chr3R 30088699 30088719 11 87 0.0 1.5 0.8 6.1 107 chr3R 30088612 intron sima + chr3R 30088666 intron sima + chr3R 30088719 intron sima + chr3R_11_30085001 chr3R_30085001 S1 1977 chr3R 30124963 30124978 chr3R 30125040 30125053 9 77 3.5 5.5 4.5 1.6 90 chr3R 30124963 intergenic CG45073 - chr3R 30125008 intergenic CG45073 - chr3R 30125053 intergenic CG45073 - chr3R_9_30125001 chr3R_30125001 S1 1978 chr3R 30136950 30136978 chr3R 30137030 30137058 4 80 5.0 4.0 4.5 0.7 108 chr3R 30136950 exon AdoR - chr3R 30137004 intron AdoR - chr3R 30137058 intron AdoR - chr3R_4_30135001 chr3R_30135001 S1 1979 chr3R 30156866 30156896 chr3R 30156946 30156976 15 78 3.5 3.5 3.5 3.3 110 chr3R 30156866 intron CG11498 - chr3R 30156921 intron CG11498 - chr3R 30156976 intron CG11498 - chr3R_15_30155001 chr3R_30155001 S1 1980 chr3R 30184230 30184265 chr3R 30184345 30184379 21 113 2.0 2.5 2.2 6.6 149 chr3R 30184230 3` UTR CR44262 - chr3R 30184304 3` UTR CR44262 - chr3R 30184379 3` UTR CR44262 - chr3R_21_30180001 chr3R_30180001 S1 1981 chr3R 30238765 30238797 chr3R 30239930 30239962 1360 7 1165 3.0 3.0 3.0 1.8 1197 chr3R 30238765 intergenic not near genes chr3R 30239364 intergenic not near genes chr3R 30239962 intergenic not near genes chr3R_7_30235001 chr3R_30235001 S1 1982 chr3R 30252272 30252302 chr3R 30252393 30252431 18 128 7.0 8.0 7.5 2.1 159 chr3R 30252272 exon CG9682 + chr3R 30252352 exon CG9682 + chr3R 30252431 exon CG9682 + chr3R_18_30250001 chr3R_30250001 S1 1983 chr3R 30278752 30278780 chr3R 30278843 30278870 5 91 14.0 15.0 14.5 0.3 118 chr3R 30278752 5` UTR hdc + chr3R 30278811 5` UTR hdc + chr3R 30278870 5` UTR hdc + chr3R_5_30275001 chr3R_30275001 S1 1984 chr3R 30307116 30307153 chr3R 30307198 30307235 17 82 3.0 4.0 3.5 3.8 119 chr3R 30307116 intron hdc + chr3R 30307176 intron hdc + chr3R 30307235 intron hdc + chr3R_17_30305001 chr3R_30305001 S1 1985 chr3R 30317324 30317359 chr3R 30324917 30324952 roo 7 7593 0.0 2.5 1.2 3.2 7628 chr3R 30317324 intron hdc + chr3R 30321138 intron hdc + chr3R 30324952 intron hdc + chr3R_7_30320001 chr3R_30320001 S1 1986 chr3R 30456393 30456419 chr3R 30456474 30456500 7 81 3.0 5.0 4.0 1.4 107 chr3R 30456393 intergenic CG2224 - chr3R 30456446 3` UTR CG2224 - chr3R 30456500 3` UTR CG2224 - chr3R_7_30455001 chr3R_30455001 S1 1987 chr3R 30458013 30458047 chr3R 30458094 30458128 15 81 3.0 3.0 3.0 3.8 115 chr3R 30458013 intron CG2224 - chr3R 30458070 intron CG2224 - chr3R 30458128 intron CG2224 - chr3R_15_30455001 chr3R_30455001 S1 1988 chr3R 30461491 30461523 chr3R 30461609 30461641 10 118 2.5 3.0 2.8 2.6 150 chr3R 30461491 intron CDase + chr3R 30461566 intron CDase + chr3R 30461641 intron CDase + chr3R_10_30460001 chr3R_30460001 S1 1989 chr3R 30480476 30480513 chr3R 30482945 30482982 jockey 17 2469 3.0 8.0 5.5 2.6 2506 chr3R 30480476 intron PH4alphaEFB + chr3R 30481729 intron PH4alphaEFB + chr3R 30482982 intron PH4alphaEFB + chr3R_17_30480001 chr3R_30480001 S1 1990 chr3R 30485057 30485071 chr3R 30485134 30485148 5 77 2.5 4.5 3.5 1.1 91 chr3R 30485057 intron PH4alphaEFB + chr3R 30485102 intron PH4alphaEFB + chr3R 30485148 intron PH4alphaEFB + chr3R_5_30485001 chr3R_30485001 S1 1991 chr3R 30549011 30549039 chr3R 30549104 30549132 6 93 2.0 1.5 1.8 2.1 121 chr3R 30549011 intron tmod + chr3R 30549072 intron tmod + chr3R 30549132 intron tmod + chr3R_6_30545001 chr3R_30545001 S1 1992 chr3R 30564333 30564349 chr3R 30564417 30564433 6 84 4.5 4.0 4.2 1.2 100 chr3R 30564333 intron tmod + chr3R 30564383 intron tmod + chr3R 30564433 intron tmod + chr3R_6_30560001 chr3R_30560001 S1 1993 chr3R 30620096 30620115 chr3R 30744356 30744375 blood 4 124260 8.0 6.0 7.0 0.5 124279 chr3R 30620096 intron CG44954 - chr3R 30682236 intergenic not near genes chr3R 30744375 3` UTR CG15543 + chr3R_4_30680001 chr3R_30680001 S1 1994 chr3R 30627608 30627635 chr3R 30627689 30627716 4 81 5.0 4.0 4.5 0.7 108 chr3R 30627608 exon CG2267 - chr3R 30627662 exon CG2267 - chr3R 30627716 exon CG2267 - chr3R_4_30625001 chr3R_30625001 S1 1995 chr3R 30747551 30747576 chr3R 30747628 30747653 6 77 2.5 2.5 2.5 1.7 102 chr3R 30747551 intergenic CR43238 - chr3R 30747602 intergenic CR43238 - chr3R 30747653 intergenic CR43238 - chr3R_6_30745001 chr3R_30745001 S1 1996 chr3R 30795922 30795934 chr3R 30796241 30796253 7 319 1.5 2.0 1.8 2.5 331 chr3R 30795922 intron wts - chr3R 30796088 intron wts - chr3R 30796253 intron wts - chr3R_7_30795001 chr3R_30795001 S1 1997 chr3R 30799068 30799085 chr3R 30799145 30799161 10 77 3.5 5.0 4.2 1.9 93 chr3R 30799068 intron wts - chr3R 30799114 intron wts - chr3R 30799161 intron wts - chr3R_10_30795001 chr3R_30795001 S1 1998 chr3R 30818810 30818846 chr3R 30820376 30820412 1360 5 1566 3.0 2.5 2.8 1.3 1602 chr3R 30818810 intron cindr + chr3R 30819611 intron cindr + chr3R 30820412 intron cindr + chr3R_5_30815001 chr3R_30815001 S1 1999 chr3R 30982595 30982630 chr3R 30982688 30982723 7 93 1.0 5.0 3.0 1.8 128 chr3R 30982595 intron 5-HT7 - chr3R 30982659 intron 5-HT7 - chr3R 30982723 intron 5-HT7 - chr3R_7_30980001 chr3R_30980001 S1 2000 chr3R 30996633 30996662 chr3R 30996858 30996887 6 225 2.5 4.5 3.5 1.3 254 chr3R 30996633 intron 5-HT7 - chr3R 30996760 intron 5-HT7 - chr3R 30996887 intron 5-HT7 - chr3R_6_30995001 chr3R_30995001 S1 2001 chr3R 31029727 31029755 chr3R 31029809 31029837 8 82 3.0 3.0 3.0 2.0 110 chr3R 31029727 intergenic not near genes chr3R 31029782 intergenic not near genes chr3R 31029837 intergenic not near genes chr3R_8_31025001 chr3R_31025001 S1 2002 chr3R 31042113 31042139 chr3R 31042201 31042227 9 88 3.5 3.5 3.5 2.0 114 chr3R 31042113 intron CanA1 + chr3R 31042170 intron CanA1 + chr3R 31042227 intron CanA1 + chr3R_9_31040001 chr3R_31040001 S1 2003 chr3R 31074230 31074260 chr3R 31081829 31081859 springer 15 7599 6.5 3.5 5.0 2.5 7629 chr3R 31074230 intron Sox100B + chr3R 31078044 intron Sox100B + chr3R 31081859 intron Sox100B + chr3R_15_31075001 chr3R_31075001 S1 2004 chr3R 31183656 31183682 chr3R 31183738 31183774 18 91 2.5 3.5 3.0 4.5 118 chr3R 31183656 intron mesh - chr3R 31183715 intron mesh - chr3R 31183774 intron mesh - chr3R_18_31180001 chr3R_31180001 S1 2005 chr3R 31258455 31258471 chr3R 31258733 31258749 7 278 2.0 5.0 3.5 1.6 294 chr3R 31258455 intron CG3669 + chr3R 31258602 intron CG3669 + chr3R 31258749 intron CG3669 + chr3R_7_31255001 chr3R_31255001 S1 2006 chr3R 31269692 31269728 chr3R 31269811 31269847 13 119 3.0 3.0 3.0 3.2 155 chr3R 31269692 intergenic not near genes chr3R 31269770 intergenic not near genes chr3R 31269847 intergenic not near genes chr3R_13_31265001 chr3R_31265001 S1 2007 chr3R 31274796 31274819 chr3R 31274876 31274899 7 80 2.0 1.5 1.8 2.5 103 chr3R 31274796 intergenic not near genes chr3R 31274848 intergenic not near genes chr3R 31274899 intergenic not near genes chr3R_7_31270001 chr3R_31270001 S1 2008 chr3R 31279375 31279397 chr3R 31285566 31285589 diver 12 6190 4.0 1.5 2.8 3.2 6214 chr3R 31279375 intergenic not near genes chr3R 31282482 intergenic not near genes chr3R 31285589 intergenic not near genes chr3R_12_31280001 chr3R_31280001 S1 2009 chr3R 31413087 31413123 chr3R 31418288 31418324 copia 6 5201 6.5 0.5 3.5 1.3 5237 chr3R 31413087 intron Gprk2 + chr3R 31415706 intron Gprk2 + chr3R 31418324 intron Gprk2 + chr3R_6_31415001 chr3R_31415001 S1 2010 chr3R 31425008 31425013 chr3R 31425096 31425100 6 88 5.5 2.0 3.8 1.2 92 chr3R 31425008 intron Gprk2 + chr3R 31425054 intron Gprk2 + chr3R 31425100 intron Gprk2 + chr3R_6_31425001 chr3R_31425001 S1 2011 chr3R 31426880 31426910 chr3R 31426973 31427003 6 93 1.5 2.0 1.8 2.1 123 chr3R 31426880 intron Gprk2 + chr3R 31426942 intron Gprk2 + chr3R 31427003 intron Gprk2 + chr3R_6_31425001 chr3R_31425001 S1 2012 chr3R 31435361 31435380 chr3R 31435514 31435533 15 153 5.5 5.5 5.5 2.3 172 chr3R 31435361 intron Gprk2 + chr3R 31435447 intron Gprk2 + chr3R 31435533 intron Gprk2 + chr3R_15_31435001 chr3R_31435001 S1 2013 chr3R 31441555 31441568 chr3R 31441928 31441941 9 373 3.5 9.5 6.5 1.2 386 chr3R 31441555 intron Gprk2 + chr3R 31441748 intron Gprk2 + chr3R 31441941 intron Gprk2 + chr3R_9_31440001 chr3R_31440001 S1 2014 chr3R 31477367 31477388 chr3R 31477536 31477557 4 169 1.0 5.0 3.0 1.0 190 chr3R 31477367 intergenic not near genes chr3R 31477462 intergenic not near genes chr3R 31477557 intergenic not near genes chr3R_4_31475001 chr3R_31475001 S1 2015 chr3R 31558507 31558542 chr3R 31558627 31558662 16 120 3.0 4.0 3.5 3.6 155 chr3R 31558507 exon nyo + chr3R 31558584 intron nyo + chr3R 31558662 intron nyo + chr3R_16_31555001 chr3R_31555001 S1 2016 chr3R 31691529 31691564 chr3R 31696296 31696331 Doc 19 4767 3.5 7.0 5.2 3.1 4802 chr3R 31691529 intergenic not near genes chr3R 31693930 intergenic not near genes chr3R 31696331 intergenic not near genes chr3R_19_31690001 chr3R_31690001 S1 2017 chr3R 31735097 31735124 chr3R 31735194 31735221 10 97 3.0 1.0 2.0 3.3 124 chr3R 31735097 3` UTR ttk + chr3R 31735159 3` UTR ttk + chr3R 31735221 3` UTR ttk + chr3R_10_31735001 chr3R_31735001 S1 2018 chr3R 31829375 31829415 chr3R 31829452 31829491 19 76 4.5 5.0 4.8 3.3 116 chr3R 31829375 intron RhoGAP100F + chr3R 31829433 intron RhoGAP100F + chr3R 31829491 intron RhoGAP100F + chr3R_19_31825001 chr3R_31825001 S1 2019 chr3R 31858745 31858782 chr3R 31858830 31858869 12 85 4.5 1.5 3.0 3.0 124 chr3R 31858745 intron heph - chr3R 31858807 intron heph - chr3R 31858869 intron heph - chr3R_12_31855001 chr3R_31855001 S1 2020 chr3R 31885674 31885702 chr3R 31885752 31885780 14 78 3.5 2.5 3.0 3.5 106 chr3R 31885674 intron heph - chr3R 31885727 intron heph - chr3R 31885780 intron heph - chr3R_14_31885001 chr3R_31885001 S1 2021 chr3R 31908918 31908942 chr3R 31908992 31908993 6 69 4.5 1.5 3.0 1.5 75 chr3R 31908918 intron heph - chr3R 31908956 intron heph - chr3R 31908993 intron heph - chr3R_6_31905001 chr3R_31905001 S1 2022 chr3R 31931192 31931212 chr3R 31931276 31931296 5 83 1.0 2.5 1.8 1.8 104 chr3R 31931192 intron heph - chr3R 31931244 intron heph - chr3R 31931296 intron heph - chr3R_5_31930001 chr3R_31930001 S1 2023 chr3R 31943128 31943158 chr3R 31943223 31943253 12 95 0.5 5.0 2.8 3.2 125 chr3R 31943128 intron heph - chr3R 31943190 intron heph - chr3R 31943253 intron heph - chr3R_12_31940001 chr3R_31940001 S1 2024 chr3R 31997992 31998025 chr3R 32005463 32005496 blood 8 7469 3.0 4.0 3.5 1.8 7504 chr3R 31997992 intron heph - chr3R 32001744 intron heph - chr3R 32005496 intron heph - chr3R_8_32000001 chr3R_32000001 S1 2025 chr4 76494 76517 chr4 81938 81961 I-element 6 5444 2.5 2.5 2.5 1.7 5467 chr4 76494 intron pan + chr4 79228 intron pan + chr4 81961 intron pan + chr4_6_75001 chr4_75001 S1 2026 chr4 319990 320007 chr4 328167 328184 Stalker2 5 8177 5.0 2.0 3.5 1.1 8194 chr4 319990 3` UTR CG32850 + chr4 324087 intron CG32850 + chr4 328184 3` UTR CG32850 + chr4_5_320001 chr4_320001 S1 2027 chr4 671607 671636 chr4 680191 680220 Tirant 16 8583 1.5 8.0 4.8 2.8 8613 chr4 671607 intron CG11360 + chr4 675914 intron CG11360 + chr4 680220 intron CG11360 + chr4_16_675001 chr4_675001 S1 2028 chr4 959622 959655 chr4 959802 959835 10 180 4.5 2.5 3.5 2.2 213 chr4 959622 intergenic CR44030 +,CR45201 - chr4 959728 5` UTR CR44030 + chr4 959835 5` UTR CR44030 + chr4_10_955001 chr4_955001 S1 2029 chr4 972501 972516 chr4 972584 972599 5 83 1.0 2.5 1.8 1.8 98 chr4 972501 intron fuss - chr4 972550 intron fuss - chr4 972599 intron fuss - chr4_5_970001 chr4_970001 S1 2030 chrX 289524 289557 chrX 289626 289659 11 102 2.0 1.0 1.5 4.4 135 chrX 289524 intron,intron CG3777 +,CG13375 - chrX 289592 intron,intron CG3777 +,CG13375 - chrX 289659 intron,intron CG3777 +,CG13375 - chrX_11_285001 chrX_285001 S1 2031 chrX 295864 295881 chrX 303485 303502 412 4 7621 1.0 3.0 2.0 1.3 7638 chrX 295864 intron CG3777 + chrX 299683 intron CG3777 + chrX 303502 intron CG3777 + chrX_4_295001 chrX_295001 S1 2032 chrX 428419 428439 chrX 434605 434625 3S18 4 6186 7.5 1.5 4.5 0.7 6206 chrX 428419 intron CG32816 - chrX 431522 intron CG32816 - chrX 434625 intron CG32816 - chrX_4_430001 chrX_430001 S1 2033 chrX 533909 533922 chrX 534315 534328 5 406 0.5 0.0 0.2 4.2 419 chrX 533909 intron Appl + chrX 534118 intron Appl + chrX 534328 intron Appl + chrX_5_530001 chrX_530001 S1 2034 chrX 551427 551432 chrX 558990 558995 412 4 7563 7.0 3.0 5.0 0.7 7568 chrX 551427 intron Appl + chrX 555211 intron Appl + chrX 558995 intron Appl + chrX_4_555001 chrX_555001 S1 2035 chrX 551433 551444 chrX 558985 559007 412 8 7562 6.0 3.0 4.5 1.5 7574 chrX 551433 intron Appl + chrX 555220 intron Appl + chrX 559007 intron Appl + chrX_8_555001 chrX_555001 S1 2036 chrX 802284 802321 chrX 802362 802399 7 78 5.0 3.5 4.2 1.3 115 chrX 802284 exon CG13359 - chrX 802342 exon CG13359 - chrX 802399 exon CG13359 - chrX_7_800001 chrX_800001 S1 2037 chrX 906705 906734 chrX 908495 908524 S-element 8 1789 1.5 4.0 2.8 2.1 1819 chrX 906705 intron CG43867 - chrX 907614 intron CG43867 - chrX 908524 intron CG43867 - chrX_8_905001 chrX_905001 S1 2038 chrX 1052566 1052573 chrX 1086080 1086087 roo 5 33514 13.5 12.0 12.8 0.4 33521 chrX 1052566 intron,3` UTR CR44779 +,CG14629 + chrX 1069326 intron CR44779 + chrX 1086087 5` UTR,intron CR44779 +,CG3655 - chrX_5_1065001 chrX_1065001 S1 2039 chrX 1095327 1095340 chrX 1095411 1095424 6 84 3.0 3.0 3.0 1.5 97 chrX 1095327 intron CG3655 - chrX 1095376 intron CG3655 - chrX 1095424 intron CG3655 - chrX_6_1095001 chrX_1095001 S1 2040 chrX 1163296 1163330 chrX 1163375 1163409 12 79 2.0 1.5 1.8 4.3 113 chrX 1163296 intergenic CG34320 - chrX 1163352 intergenic CG34320 - chrX 1163409 intergenic CG34320 - chrX_12_1160001 chrX_1160001 S1 2041 chrX 1185559 1185578 chrX 1185639 1185658 7 79 2.5 1.5 2.0 2.3 99 chrX 1185559 intron CG14626 + chrX 1185608 intron CG14626 + chrX 1185658 intron CG14626 + chrX_7_1185001 chrX_1185001 S1 2042 chrX 1302232 1302259 chrX 1355464 1355491 8 53233 25.5 23.5 24.5 0.3 53259 chrX 1302232 intron DAAM - chrX 1328862 exon fs(1)N + chrX 1355491 exon CG11417 + chrX_8_1325001 chrX_1325001 S1 2043 chrX 1357791 1357804 chrX 1367962 1367975 Doc 5 10170 1.5 4.5 3.0 1.2 10184 chrX 1357791 intergenic png - chrX 1362883 intergenic not near genes chrX 1367975 intergenic not near genes chrX_5_1360001 chrX_1360001 S1 2044 chrX 1518042 1518075 chrX 1523445 1523478 jockey 8 5402 1.0 3.0 2.0 2.7 5436 chrX 1518042 intergenic inc + chrX 1520760 intergenic not near genes chrX 1523478 intergenic not near genes chrX_8_1520001 chrX_1520001 S1 2045 chrX 1627976 1628005 chrX 1635445 1635466 gtwin 6 7468 1.5 1.5 1.5 2.4 7490 chrX 1627976 intron,intron Mur2B -,br + chrX 1631721 intron,intron Mur2B -,br + chrX 1635466 intron,intron Mur2B -,br + chrX_6_1630001 chrX_1630001 S1 2046 chrX 1903269 1903293 chrX 1903351 1903375 6 82 0.5 2.0 1.2 2.7 106 chrX 1903269 5` UTR CR43864 + chrX 1903322 5` UTR CR43864 + chrX 1903375 5` UTR CR43864 + chrX_6_1900001 chrX_1900001 S1 2047 chrX 1930535 1930568 chrX 1938107 1938140 opus 5 7572 0.0 0.5 0.2 4.2 7605 chrX 1930535 intergenic CG11596 + chrX 1934338 intergenic not near genes chrX 1938140 3` UTR CG3857 - chrX_5_1930001 chrX_1930001 S1 2048 chrX 1954883 1954913 chrX 1962824 1962848 Stalker2 7 7937 2.0 2.5 2.2 2.2 7965 chrX 1954883 intron Hr4 + chrX 1958866 intron Hr4 + chrX 1962848 intron Hr4 + chrX_7_1955001 chrX_1955001 S1 2049 chrX 2291639 2291671 chrX 2291723 2291755 10 84 2.0 0.0 1.0 5.0 116 chrX 2291639 intron CG2865 - chrX 2291697 intron CG2865 - chrX 2291755 intron CG2865 - chrX_10_2290001 chrX_2290001 S1 2050 chrX 2399834 2399868 chrX 2408188 2408222 roo 9 8354 2.5 2.5 2.5 2.6 8388 chrX 2399834 intergenic not near genes chrX 2404028 intergenic not near genes chrX 2408222 intergenic not near genes chrX_9_2400001 chrX_2400001 S1 2051 chrX 2578826 2578841 chrX 2578919 2578934 5 93 3.0 2.0 2.5 1.4 108 chrX 2578826 intergenic Pdfr +,Vha36-3 - chrX 2578880 intergenic Vha36-3 -,Pdfr + chrX 2578934 intergenic Vha36-3 -,Pdfr + chrX_5_2575001 chrX_2575001 S1 2052 chrX 2803496 2803523 chrX 2803640 2803667 5 144 2.5 0.5 1.5 2.0 171 chrX 2803496 intron kirre + chrX 2803582 intron kirre + chrX 2803667 intron kirre + chrX_5_2800001 chrX_2800001 S1 2053 chrX 2820142 2820150 chrX 2821770 2821778 4 1628 2.0 0.0 1.0 2.0 1636 chrX 2820142 intron kirre + chrX 2820960 intron kirre + chrX 2821778 intron kirre + chrX_4_2820001 chrX_2820001 S1 2054 chrX 3243626 3243655 chrX 3243717 3243746 6 91 1.0 1.5 1.2 2.7 120 chrX 3243626 intron dnc + chrX 3243686 intron dnc + chrX 3243746 intron dnc + chrX_6_3240001 chrX_3240001 S1 2055 chrX 3597547 3597582 chrX 3619716 3619751 roo 7 22169 1.5 1.5 1.5 2.8 22204 chrX 3597547 intron AstA-R1 + chrX 3608649 intron AstA-R1 + chrX 3619751 intron AstA-R1 + chrX_7_3605001 chrX_3605001 S1 2056 chrX 3713099 3713134 chrX 3713208 3713244 5 110 2.0 0.5 1.2 2.3 145 chrX 3713099 intron Rala - chrX 3713172 intron Rala - chrX 3713244 intron Rala - chrX_5_3710001 chrX_3710001 S1 2057 chrX 3752394 3752410 chrX 3764744 3764760 17.6 12 12350 3.0 5.5 4.2 2.3 12366 chrX 3752394 intron tlk + chrX 3758577 intron tlk + chrX 3764760 intron tlk + chrX_12_3755001 chrX_3755001 S1 2058 chrX 3881267 3881305 chrX 3881407 3881445 10 140 2.5 2.0 2.2 3.1 178 chrX 3881267 intron VhaAC39-1 + chrX 3881356 intron VhaAC39-1 + chrX 3881445 intron VhaAC39-1 + chrX_10_3880001 chrX_3880001 S1 2059 chrX 3986866 3986889 chrX 3994500 3994523 412 6 7634 1.0 0.0 0.5 4.0 7657 chrX 3986866 intergenic not near genes chrX 3990694 intergenic not near genes chrX 3994523 intergenic not near genes chrX_6_3990001 chrX_3990001 S1 2060 chrX 4029543 4029561 chrX 4029734 4029752 5 191 2.0 2.0 2.0 1.7 209 chrX 4029543 intergenic not near genes chrX 4029648 intergenic not near genes chrX 4029752 intergenic not near genes chrX_5_4025001 chrX_4025001 S1 2061 chrX 4101891 4101899 chrX 4101972 4101979 4 81 1.5 5.0 3.2 1.0 88 chrX 4101891 exon CG15375 + chrX 4101935 exon CG15375 + chrX 4101979 exon CG15375 + chrX_4_4100001 chrX_4100001 S1 2062 chrX 4240173 4240209 chrX 4240301 4240337 12 128 2.5 2.0 2.2 3.8 164 chrX 4240173 intergenic not near genes chrX 4240255 intergenic not near genes chrX 4240337 intergenic not near genes chrX_12_4240001 chrX_4240001 S1 2063 chrX 4347691 4347702 chrX 4347775 4347786 5 84 4.5 4.0 4.2 1.0 95 chrX 4347691 intron norpA + chrX 4347738 intron norpA + chrX 4347786 intron norpA + chrX_5_4345001 chrX_4345001 S1 2064 chrX 4389377 4389379 chrX 12946233 12946235 26 8556856 1.0 5.0 3.0 6.5 8556858 chrX 4389377 intron CR32773 - chrX 8667806 intergenic not near genes chrX 12946235 3` UTR fne + chrX_26_8665001 chrX_8665001 S1 2065 chrX 4409139 4409161 chrX 4409225 4409247 4 86 2.0 1.0 1.5 1.6 108 chrX 4409139 intron CR32773 - chrX 4409193 intron CR32773 - chrX 4409247 intron CR32773 - chrX_4_4405001 chrX_4405001 S1 2066 chrX 4575626 4575644 chrX 4575716 4575734 5 90 1.0 3.5 2.2 1.6 108 chrX 4575626 intron CR32773 - chrX 4575680 intron CR32773 - chrX 4575734 intron CR32773 - chrX_5_4575001 chrX_4575001 S1 2067 chrX 4613544 4613575 chrX 4613635 4613663 6 90 1.0 1.5 1.2 2.7 119 chrX 4613544 intergenic not near genes chrX 4613604 intergenic not near genes chrX 4613663 intergenic not near genes chrX_6_4610001 chrX_4610001 S1 2068 chrX 4723572 4723583 chrX 4723653 4723664 6 81 4.0 2.5 3.2 1.4 92 chrX 4723572 intron Proc-R + chrX 4723618 intron Proc-R + chrX 4723664 intron Proc-R + chrX_6_4720001 chrX_4720001 S1 2069 chrX 4792384 4792410 chrX 4792818 4792844 jockey 4 434 2.0 2.5 2.2 1.2 460 chrX 4792384 intergenic not near genes chrX 4792614 intergenic not near genes chrX 4792844 intergenic not near genes chrX_4_4790001 chrX_4790001 S1 2070 chrX 4816519 4816544 chrX 4817326 4817351 5 804 0.5 2.5 1.5 2.0 832 chrX 4816519 intergenic not near genes chrX 4816935 intergenic not near genes chrX 4817351 intergenic not near genes chrX_5_4815001 chrX_4815001 S1 2071 chrX 4827968 4828000 chrX 4835340 4835372 Stalker4 12 7372 1.0 2.0 1.5 4.8 7404 chrX 4827968 intergenic not near genes chrX 4831670 intergenic not near genes chrX 4835372 intergenic not near genes chrX_12_4830001 chrX_4830001 S1 2072 chrX 4931346 4931381 chrX 4931441 4931476 11 94 4.5 3.5 4.0 2.2 130 chrX 4931346 intron CG44774 - chrX 4931411 intron CG44774 - chrX 4931476 intron CG44774 - chrX_11_4930001 chrX_4930001 S1 2073 chrX 5131398 5131431 chrX 5131480 5131513 11 82 3.0 5.0 4.0 2.2 115 chrX 5131398 intron,intron CG15465 +,rg + chrX 5131456 intron,intron CG15465 +,rg + chrX 5131513 intron,intron CG15465 +,rg + chrX_11_5130001 chrX_5130001 S1 2074 chrX 5362846 5362852 chrX 5362959 5362965 5 113 1.0 2.5 1.8 1.8 119 chrX 5362846 intron SK + chrX 5362906 intron SK + chrX 5362965 intron SK + chrX_5_5360001 chrX_5360001 S1 2075 chrX 5441993 5442012 chrX 5442102 5442121 5 108 2.5 4.0 3.2 1.2 128 chrX 5441993 intergenic not near genes chrX 5442057 intergenic not near genes chrX 5442121 intergenic not near genes chrX_5_5440001 chrX_5440001 S1 2076 chrX 5488988 5489023 chrX 5489190 5489226 9 203 3.0 1.5 2.2 2.8 238 chrX 5488988 intron SPR + chrX 5489107 intron SPR + chrX 5489226 intron SPR + chrX_9_5485001 chrX_5485001 S1 2077 chrX 5518726 5518758 chrX 5518812 5518844 7 86 0.5 1.0 0.8 3.9 118 chrX 5518726 3` UTR CG12730 + chrX 5518785 intergenic CG12730 + chrX 5518844 intergenic CG12730 + chrX_7_5515001 chrX_5515001 S1 2078 chrX 5792573 5792741 chrX 5792708 5792817 8 107 1.0 0.0 0.5 5.3 244 chrX 5792573 exon CG12239 + chrX 5792695 exon CG12239 + chrX 5792817 exon CG12239 + chrX_8_5790001 chrX_5790001 S1 2079 chrX 5883808 5883833 chrX 5884050 5884075 pogo 7 242 1.5 2.0 1.8 2.5 267 chrX 5883808 intron CR45668 - chrX 5883942 intron CR45668 - chrX 5884075 intron CR45668 - chrX_7_5880001 chrX_5880001 S1 2080 chrX 5884168 5884190 chrX 5884410 5884432 pogo 5 242 1.0 2.5 1.8 1.8 264 chrX 5884168 intron CR45668 - chrX 5884300 intron CR45668 - chrX 5884432 intron CR45668 - chrX_5_5880001 chrX_5880001 S1 2081 chrX 6171584 6171614 chrX 6179018 6179048 Quasimodo 10 7434 1.0 3.0 2.0 3.3 7464 chrX 6171584 intron Ca-alpha1T - chrX 6175316 intron Ca-alpha1T - chrX 6179048 intron Ca-alpha1T - chrX_10_6175001 chrX_6175001 S1 2082 chrX 6350576 6350605 chrX 6350667 6350696 8 91 2.5 2.5 2.5 2.3 120 chrX 6350576 intergenic kdn +,CG3446 - chrX 6350636 5` UTR kdn + chrX 6350696 5` UTR kdn + chrX_8_6350001 chrX_6350001 S1 2083 chrX 6388670 6388688 chrX 6388747 6388765 6 77 1.0 1.0 1.0 3.0 95 chrX 6388670 intergenic not near genes chrX 6388718 intergenic not near genes chrX 6388765 intergenic not near genes chrX_6_6385001 chrX_6385001 S1 2084 chrX 6392873 6392898 chrX 6397639 6397664 Doc 8 4766 1.5 2.5 2.0 2.7 4791 chrX 6392873 intergenic not near genes chrX 6395268 intergenic not near genes chrX 6397664 intergenic not near genes chrX_8_6395001 chrX_6395001 S1 2085 chrX 6509914 6509944 chrX 6509994 6510024 6 80 1.0 2.5 1.8 2.1 110 chrX 6509914 intron CG42340 - chrX 6509969 intron CG42340 - chrX 6510024 intron CG42340 - chrX_6_6505001 chrX_6505001 S1 2086 chrX 6562817 6562850 chrX 6571300 6571333 Tirant 12 8483 1.5 3.0 2.2 3.8 8516 chrX 6562817 intron CG34417 + chrX 6567075 intron CG34417 + chrX 6571333 intron CG34417 + chrX_12_6565001 chrX_6565001 S1 2087 chrX 6697228 6697255 chrX 6697318 6697333 5 88 3.0 1.0 2.0 1.7 105 chrX 6697228 3` UTR CG14440 - chrX 6697280 3` UTR CG14440 - chrX 6697333 exon CG14440 - chrX_5_6695001 chrX_6695001 S1 2088 chrX 6897572 6897711 chrX 6897651 6897822 9 100 1.0 1.0 1.0 4.5 250 chrX 6897572 intergenic not near genes chrX 6897697 intergenic not near genes chrX 6897822 intergenic not near genes chrX_9_6895001 chrX_6895001 S1 2089 chrX 6989506 6989531 chrX 6989594 6989619 11 88 1.5 2.0 1.8 3.9 113 chrX 6989506 intron ogre - chrX 6989562 intron ogre - chrX 6989619 intron ogre - chrX_11_6985001 chrX_6985001 S1 2090 chrX 7023606 7023627 chrX 7030997 7031018 Tabor 5 7391 10.0 4.5 7.2 0.6 7412 chrX 7023606 intron CG12541 - chrX 7027312 intron CG12541 - chrX 7031018 intron CG12541 - chrX_5_7025001 chrX_7025001 S1 2091 chrX 7035160 7035189 chrX 7035276 7035305 7 115 0.5 2.5 1.5 2.8 145 chrX 7035160 intron CG12541 - chrX 7035232 intron CG12541 - chrX 7035305 intron CG12541 - chrX_7_7035001 chrX_7035001 S1 2092 chrX 7845722 7845739 chrX 7847214 7847231 hopper2 4 1492 3.5 1.0 2.2 1.2 1509 chrX 7845722 intergenic not near genes chrX 7846476 intergenic not near genes chrX 7847231 intergenic not near genes chrX_4_7845001 chrX_7845001 S1 2093 chrX 8013250 8013267 chrX 8013363 8013380 4 113 1.5 2.5 2.0 1.3 130 chrX 8013250 intron Tbh + chrX 8013315 intron Tbh + chrX 8013380 intron Tbh + chrX_4_8010001 chrX_8010001 S1 2094 chrX 8092288 8092323 chrX 8092374 8092409 7 86 2.5 0.5 1.5 2.8 121 chrX 8092288 intron Ubc-E2H - chrX 8092348 intron Ubc-E2H - chrX 8092409 intron Ubc-E2H - chrX_7_8090001 chrX_8090001 S1 2095 chrX 8364846 8364876 chrX 8365244 8365274 BS 8 398 1.5 2.5 2.0 2.7 428 chrX 8364846 intron nAChRalpha3 - chrX 8365060 intron nAChRalpha3 - chrX 8365274 intron nAChRalpha3 - chrX_8_8365001 chrX_8365001 S1 2096 chrX 8506032 8506056 chrX 8506111 8506135 5 79 1.0 1.0 1.0 2.5 103 chrX 8506032 intron CG33181 + chrX 8506084 intron CG33181 + chrX 8506135 intron CG33181 + chrX_5_8505001 chrX_8505001 S1 2097 chrX 8506537 8506552 chrX 8506746 8506761 6 209 1.5 1.5 1.5 2.4 224 chrX 8506537 intron CG33181 + chrX 8506649 intron CG33181 + chrX 8506761 intron CG33181 + chrX_6_8505001 chrX_8505001 S1 2098 chrX 8843842 8843856 chrX 8843927 8843941 4 85 1.0 0.0 0.5 2.7 99 chrX 8843842 intron CG12075 + chrX 8843892 intron CG12075 + chrX 8843941 intron CG12075 + chrX_4_8840001 chrX_8840001 S1 2099 chrX 8874056 8874081 chrX 8874187 8874212 10 131 14.5 14.5 14.5 0.6 156 chrX 8874056 exon Moe - chrX 8874134 intron Moe - chrX 8874212 exon Moe - chrX_10_8870001 chrX_8870001 S1 2100 chrX 8922325 8922360 chrX 8922760 8922795 jockey 10 434 2.5 3.0 2.8 2.6 470 chrX 8922325 intron rdgA + chrX 8922560 intron rdgA + chrX 8922795 intron rdgA + chrX_10_8920001 chrX_8920001 S1 2101 chrX 9129489 9129511 chrX 9129576 9129598 9 87 1.5 3.5 2.5 2.6 109 chrX 9129489 intron fend - chrX 9129544 intron fend - chrX 9129598 intron fend - chrX_9_9125001 chrX_9125001 S1 2102 chrX 9229919 9229938 chrX 9230000 9230019 4 81 2.0 4.0 3.0 1.0 100 chrX 9229919 intron CG12121 - chrX 9229969 intron CG12121 - chrX 9230019 intron CG12121 - chrX_4_9225001 chrX_9225001 S1 2103 chrX 9337939 9337969 chrX 9338032 9338062 10 93 3.0 3.0 3.0 2.5 123 chrX 9337939 intron CG34449 - chrX 9338000 intron CG34449 - chrX 9338062 exon CG34449 - chrX_10_9335001 chrX_9335001 S1 2104 chrX 9465137 9465165 chrX 9465232 9465260 7 95 1.0 1.5 1.2 3.2 123 chrX 9465137 intron mgl - chrX 9465198 intron mgl - chrX 9465260 intron mgl - chrX_7_9465001 chrX_9465001 S1 2105 chrX 9508131 9508163 chrX 9509650 9509682 jockey 9 1519 3.0 2.5 2.8 2.4 1551 chrX 9508131 intron CG32700 - chrX 9508906 intron CG32700 - chrX 9509682 intron CG32700 - chrX_9_9505001 chrX_9505001 S1 2106 chrX 9575791 9575822 chrX 9576113 9576147 mdg3 14 324 2.0 2.5 2.2 4.4 356 chrX 9575791 intron,exon CG32699 -,CG42395 - chrX 9575969 intron,intron CG32699 -,CG42395 - chrX 9576147 intron,5` UTR CG32699 -,CG42395 - chrX_14_9575001 chrX_9575001 S1 2107 chrX 9599174 9599195 chrX 9599253 9599274 5 79 2.5 2.0 2.2 1.6 100 chrX 9599174 intergenic not near genes chrX 9599224 intergenic not near genes chrX 9599274 intergenic not near genes chrX_5_9595001 chrX_9595001 S1 2108 chrX 9837811 9837829 chrX 9839739 9839757 5 1928 10.5 14.0 12.2 0.4 1946 chrX 9837811 intron CG32698 + chrX 9838784 intron CG32698 + chrX 9839757 intron CG32698 + chrX_5_9835001 chrX_9835001 S1 2109 chrX 9845361 9845361 chrX 14544906 14544906 4 4699545 12.5 17.0 14.8 0.3 4699545 chrX 9845361 intron CG32698 + chrX 12195134 intron Ten-a + chrX 14544906 intergenic not near genes chrX_4_12195001 chrX_12195001 S1 2110 chrX 9923393 9923420 chrX 9923485 9923511 5 92 2.5 2.5 2.5 1.4 118 chrX 9923393 intergenic not near genes chrX 9923452 intergenic not near genes chrX 9923511 intergenic not near genes chrX_5_9920001 chrX_9920001 S1 2111 chrX 10154286 10154310 chrX 10154363 10154387 6 77 2.0 1.0 1.5 2.4 101 chrX 10154286 intron,intron CR44894 -,CG12645 + chrX 10154336 intron,intron CR44894 -,CG12645 + chrX 10154387 intron,exon CR44894 -,CG12645 + chrX_6_10150001 chrX_10150001 S1 2112 chrX 10550852 10550885 chrX 10552320 10552353 hobo 7 1468 0.5 2.0 1.2 3.2 1501 chrX 10550852 intron spri - chrX 10551602 intron spri - chrX 10552353 intron spri - chrX_7_10550001 chrX_10550001 S1 2113 chrX 10719130 10719146 chrX 10719215 10719231 6 85 0.0 2.5 1.2 2.7 101 chrX 10719130 intron CG32676 - chrX 10719180 intron CG32676 - chrX 10719231 intron CG32676 - chrX_6_10715001 chrX_10715001 S1 2114 chrX 10772685 10772696 chrX 10772758 10772780 Tirant 7 82 4.0 0.5 2.2 2.2 95 chrX 10772685 intron CG15211 + chrX 10772732 intron CG15211 + chrX 10772780 intron CG15211 + chrX_7_10770001 chrX_10770001 S1 2115 chrX 10803034 10803045 chrX 10803120 10803131 4 86 3.0 4.0 3.5 0.9 97 chrX 10803034 intron Imp - chrX 10803082 intron Imp - chrX 10803131 intron Imp - chrX_4_10800001 chrX_10800001 S1 2116 chrX 10876646 10876651 chrX 10876725 10876730 5 79 0.0 2.5 1.2 2.3 84 chrX 10876646 intron CG1637 - chrX 10876688 intron CG1637 - chrX 10876730 intron CG1637 - chrX_5_10875001 chrX_10875001 S1 2117 chrX 11109417 11109417 chrX 12946234 12946235 5 1836818 5.0 5.0 5.0 0.8 1836818 chrX 11109417 intron Hsp60 + chrX 12027826 exon Usp7 - chrX 12946235 3` UTR fne + chrX_5_12025001 chrX_12025001 S1 2118 chrX 11191904 11191921 chrX 11191983 11192000 5 79 2.5 3.5 3.0 1.2 96 chrX 11191904 intergenic not near genes chrX 11191952 intergenic not near genes chrX 11192000 intergenic not near genes chrX_5_11190001 chrX_11190001 S1 2119 chrX 11205293 11205311 chrX 11205370 11205388 4 77 1.0 1.0 1.0 2.0 95 chrX 11205293 intergenic not near genes chrX 11205340 intergenic not near genes chrX 11205388 intergenic not near genes chrX_4_11205001 chrX_11205001 S1 2120 chrX 11312055 11312091 chrX 11319409 11319445 Stalker2 4 7348 1.0 2.0 1.5 1.6 7390 chrX 11312055 intergenic not near genes chrX 11315750 intergenic not near genes chrX 11319445 intergenic not near genes chrX_4_11315001 chrX_11315001 S1 2121 chrX 11384559 11384593 chrX 11384799 11384833 6 238 2.0 3.0 2.5 1.7 274 chrX 11384559 intron dlg1 + chrX 11384696 intron dlg1 + chrX 11384833 intron dlg1 + chrX_6_11380001 chrX_11380001 S1 2122 chrX 11579450 11579479 chrX 11580839 11580866 6 1389 0.5 1.0 0.8 3.3 1416 chrX 11579450 5` UTR roX2 + chrX 11580158 5` UTR roX2 + chrX 11580866 5` UTR nod + chrX_6_11580001 chrX_11580001 S1 2123 chrX 11633417 11633447 chrX 11640472 11640502 297 8 7055 2.0 4.0 3.0 2.0 7085 chrX 11633417 intron Ptp10D + chrX 11636960 intron Ptp10D + chrX 11640502 intron Ptp10D + chrX_8_11635001 chrX_11635001 S1 2124 chrX 11648982 11649012 chrX 11649064 11649078 4 78 1.0 2.5 1.8 1.4 96 chrX 11648982 intron Ptp10D + chrX 11649030 intron Ptp10D + chrX 11649078 intron Ptp10D + chrX_4_11645001 chrX_11645001 S1 2125 chrX 11804677 11804689 chrX 11804782 11804794 4 105 1.5 1.0 1.2 1.8 117 chrX 11804677 intron Hsc70-3 - chrX 11804736 intron Hsc70-3 - chrX 11804794 intron Hsc70-3 - chrX_4_11800001 chrX_11800001 S1 2126 chrX 12069053 12069089 chrX 12069141 12069177 9 88 3.0 2.5 2.8 2.4 124 chrX 12069053 intron,intron,3` UTR CR43960 +,Ten-a +,CR43961 - chrX 12069115 intron,intron,3` UTR CR43960 +,Ten-a +,CR43961 - chrX 12069177 intron,intron,3` UTR CR43960 +,Ten-a +,CR43961 - chrX_9_12065001 chrX_12065001 S1 2127 chrX 12094033 12094067 chrX 12094126 12094160 6 93 1.0 3.5 2.2 1.9 127 chrX 12094033 intron,intron CR43960 +,Ten-a + chrX 12094096 intron,intron CR43960 +,Ten-a + chrX 12094160 intron,intron CR43960 +,Ten-a + chrX_6_12090001 chrX_12090001 S1 2128 chrX 12350778 12350795 chrX 12350860 12350877 6 82 5.5 0.0 2.8 1.6 99 chrX 12350778 intergenic not near genes chrX 12350828 intergenic not near genes chrX 12350877 intergenic not near genes chrX_6_12350001 chrX_12350001 S1 2129 chrX 12521107 12521132 chrX 12521197 12521222 10 90 6.0 3.5 4.8 1.7 115 chrX 12521107 exon CG43921 - chrX 12521164 exon CG43921 - chrX 12521222 exon CG43921 - chrX_10_12520001 chrX_12520001 S1 2130 chrX 12532644 12532655 chrX 12532791 12532802 4 147 3.0 0.0 1.5 1.6 158 chrX 12532644 intron CG43921 - chrX 12532723 intron CG43921 - chrX 12532802 intron CG43921 - chrX_4_12530001 chrX_12530001 S1 2131 chrX 12681062 12681087 chrX 12681141 12681166 7 79 1.5 1.5 1.5 2.8 104 chrX 12681062 3` UTR Tis11 + chrX 12681114 3` UTR Tis11 + chrX 12681166 3` UTR Tis11 + chrX_7_12680001 chrX_12680001 S1 2132 chrX 12930598 12930607 chrX 12937715 12937724 HMS-Beagle 6 7117 1.0 5.0 3.0 1.5 7126 chrX 12930598 intron fne + chrX 12934161 intron fne + chrX 12937724 intron fne + chrX_6_12930001 chrX_12930001 S1 2133 chrX 4389379 4389380 chrX 12946233 12946233 5 8556853 1.0 5.0 3.0 1.2 8556854 chrX 4389379 intron CR32773 - chrX 8667806 intergenic not near genes chrX 12946233 3` UTR fne + chrX_5_8665001 chrX_8665001 S1 2134 chrX 8810799 8810799 chrX 12946233 12946233 4 4135434 9.5 5.0 7.2 0.5 4135434 chrX 8810799 intergenic not near genes chrX 10878516 exon Ork1 - chrX 12946233 3` UTR fne + chrX_4_10875001 chrX_10875001 S1 2135 chrX 11109417 11109417 chrX 12946233 12946233 4 1836816 5.0 5.0 5.0 0.7 1836816 chrX 11109417 intron Hsp60 + chrX 12027825 exon Usp7 - chrX 12946233 3` UTR fne + chrX_4_12025001 chrX_12025001 S1 2136 chrX 11109417 11109417 chrX 12946234 12946234 4 1836817 5.0 5.0 5.0 0.7 1836817 chrX 11109417 intron Hsp60 + chrX 12027826 exon Usp7 - chrX 12946234 3` UTR fne + chrX_4_12025001 chrX_12025001 S1 2137 chrX 12946234 12946234 chrX 18572525 18572526 10 5626292 5.0 2.5 3.8 2.1 5626292 chrX 12946234 3` UTR fne + chrX 15759380 intron Graf - chrX 18572526 intergenic not near genes chrX_10_15755001 chrX_15755001 S1 2138 chrX 4389377 4389377 chrX 12946235 12946235 10 8556858 1.0 5.0 3.0 2.5 8556858 chrX 4389377 intron CR32773 - chrX 8667806 intergenic not near genes chrX 12946235 3` UTR fne + chrX_10_8665001 chrX_8665001 S1 2139 chrX 12946235 12946235 chrX 16632148 16632149 5 3685913 5.0 0.5 2.8 1.3 3685914 chrX 12946235 3` UTR fne + chrX 14789192 3` UTR rut - chrX 16632149 intron,5` UTR Rok -,CG9777 - chrX_5_14785001 chrX_14785001 S1 2140 chrX 12946235 12946235 chrX 18572525 18572527 5 5626291 5.0 2.5 3.8 1.0 5626292 chrX 12946235 3` UTR fne + chrX 15759381 intron Graf - chrX 18572527 intergenic not near genes chrX_5_15755001 chrX_15755001 S1 2141 chrX 13061357 13061373 chrX 13061469 13061485 4 112 2.5 3.5 3.0 1.0 128 chrX 13061357 intron rad + chrX 13061421 intron rad + chrX 13061485 intron rad + chrX_4_13060001 chrX_13060001 S1 2142 chrX 13146594 13146631 chrX 13146683 13146720 6 89 0.5 0.5 0.5 4.0 126 chrX 13146594 intron CG32645 + chrX 13146657 intron CG32645 + chrX 13146720 intron CG32645 + chrX_6_13145001 chrX_13145001 S1 2143 chrX 13172347 13172379 chrX 13172424 13172456 5 77 0.5 1.0 0.8 2.8 109 chrX 13172347 exon CG34411 - chrX 13172402 intron CG34411 - chrX 13172456 intron CG34411 - chrX_5_13170001 chrX_13170001 S1 2144 chrX 13236882 13236900 chrX 13236968 13236986 4 86 0.0 0.5 0.2 3.3 104 chrX 13236882 intron mew - chrX 13236934 intron mew - chrX 13236986 intron mew - chrX_4_13235001 chrX_13235001 S1 2145 chrX 13255192 13255222 chrX 13255269 13255298 11 77 1.0 2.5 1.8 3.9 106 chrX 13255192 intron mew - chrX 13255245 intron mew - chrX 13255298 intron mew - chrX_11_13255001 chrX_13255001 S1 2146 chrX 13429461 13429495 chrX 13430611 13430645 jockey 11 1150 1.0 2.5 1.8 3.9 1184 chrX 13429461 intergenic not near genes chrX 13430053 intergenic not near genes chrX 13430645 intergenic not near genes chrX_11_13430001 chrX_13430001 S1 2147 chrX 13438764 13438775 chrX 13438856 13438867 4 92 1.5 6.5 4.0 0.8 103 chrX 13438764 intergenic not near genes chrX 13438816 intergenic not near genes chrX 13438867 intergenic not near genes chrX_4_13435001 chrX_13435001 S1 2148 chrX 13734095 13734112 chrX 13734192 13734209 7 97 3.5 4.0 3.8 1.5 114 chrX 13734095 intron g - chrX 13734152 intron g - chrX 13734209 intron g - chrX_7_13730001 chrX_13730001 S1 2149 chrX 13843394 13843406 chrX 13843472 13843484 4 78 1.5 0.0 0.8 2.2 90 chrX 13843394 intron AMPdeam - chrX 13843439 intron AMPdeam - chrX 13843484 intron AMPdeam - chrX_4_13840001 chrX_13840001 S1 2150 chrX 13853136 13853164 chrX 13888327 13888355 4 35191 5.0 2.5 3.8 0.8 35219 chrX 13853136 3` UTR mamo - chrX 13870746 intron mamo - chrX 13888355 intron mamo - chrX_4_13870001 chrX_13870001 S1 2151 chrX 13908796 13908810 chrX 13908875 13908889 6 79 5.0 8.5 6.8 0.8 93 chrX 13908796 intron mamo - chrX 13908842 intron mamo - chrX 13908889 intron mamo - chrX_6_13905001 chrX_13905001 S1 2152 chrX 13943278 13943301 chrX 13943370 13943393 5 92 0.0 4.5 2.2 1.6 115 chrX 13943278 intron mamo - chrX 13943336 intron mamo - chrX 13943393 intron mamo - chrX_5_13940001 chrX_13940001 S1 2153 chrX 14105021 14105053 chrX 14114173 14114204 roo 6 9152 2.5 3.0 2.8 1.6 9183 chrX 14105021 intergenic not near genes chrX 14109612 intergenic not near genes chrX 14114204 5` UTR CR44657 + chrX_6_14105001 chrX_14105001 S1 2154 chrX 14131487 14131524 chrX 14131568 14131606 8 82 0.0 2.0 1.0 4.0 119 chrX 14131487 intergenic not near genes chrX 14131546 intergenic not near genes chrX 14131606 intergenic not near genes chrX_8_14130001 chrX_14130001 S1 2155 chrX 14450093 14450117 chrX 14450244 14450268 8 151 4.0 2.0 3.0 2.0 175 chrX 14450093 intron dpr8 + chrX 14450180 intron dpr8 + chrX 14450268 intron dpr8 + chrX_8_14450001 chrX_14450001 S1 2156 chrX 14560272 14560302 chrX 14560357 14560387 11 85 2.0 1.0 1.5 4.4 115 chrX 14560272 intergenic not near genes chrX 14560330 intergenic not near genes chrX 14560387 intergenic not near genes chrX_11_14560001 chrX_14560001 S1 2157 chrX 14636462 14636493 chrX 14641904 14641935 I-element 11 5442 3.0 5.5 4.2 2.1 5473 chrX 14636462 intron NetA - chrX 14639198 intron NetA - chrX 14641935 intron NetA - chrX_11_14635001 chrX_14635001 S1 2158 chrX 14716843 14716856 chrX 14717185 14717190 5 340 11.0 4.5 7.8 0.6 347 chrX 14716843 intron NetB - chrX 14717016 intron NetB - chrX 14717190 intron NetB - chrX_5_14715001 chrX_14715001 S1 2159 chrX 14716857 14716874 chrX 14717183 14717216 6 338 4.5 4.0 4.2 1.2 359 chrX 14716857 intron NetB - chrX 14717036 intron NetB - chrX 14717216 intron NetB - chrX_6_14715001 chrX_14715001 S1 2160 chrX 14778026 14778061 chrX 14782824 14782859 Doc 8 4798 3.0 2.5 2.8 2.1 4833 chrX 14778026 intergenic CG5347 + chrX 14780442 intergenic not near genes chrX 14782859 intergenic Ag5r2 - chrX_8_14780001 chrX_14780001 S1 2161 chrX 14806769 14806783 chrX 14806858 14806872 9 89 2.5 0.0 1.2 4.1 103 chrX 14806769 intron rut - chrX 14806820 intron rut - chrX 14806872 intron rut - chrX_9_14805001 chrX_14805001 S1 2162 chrX 14936863 14936891 chrX 14946121 14946149 roo 4 9258 2.0 3.0 2.5 1.1 9286 chrX 14936863 intron pdgy - chrX 14941506 intron pdgy - chrX 14946149 intron pdgy - chrX_4_14940001 chrX_14940001 S1 2163 chrX 2159858 2159862 chrX 15115028 15115057 5 12955174 14.5 14.0 14.2 0.3 12955199 chrX 2159858 exon Cyp4d1 - chrX 8637458 intron oc - chrX 15115057 exon Cyp4s3 - chrX_5_8635001 chrX_8635001 S1 2164 chrX 15208521 15208551 chrX 15209002 15209032 4 481 1.0 1.5 1.2 1.8 511 chrX 15208521 intergenic not near genes chrX 15208776 intergenic not near genes chrX 15209032 intergenic not near genes chrX_4_15205001 chrX_15205001 S1 2165 chrX 15268875 15268895 chrX 15268956 15268976 4 81 3.0 1.0 2.0 1.3 101 chrX 15268875 intergenic not near genes chrX 15268926 intergenic not near genes chrX 15268976 intergenic not near genes chrX_4_15265001 chrX_15265001 S1 2166 chrX 15273714 15273735 chrX 15274882 15274903 1360 9 1167 2.0 5.5 3.8 1.9 1189 chrX 15273714 intergenic not near genes chrX 15274308 intergenic not near genes chrX 15274903 intergenic not near genes chrX_9_15270001 chrX_15270001 S1 2167 chrX 15369850 15369863 chrX 15369934 15369947 4 84 0.0 2.5 1.2 1.8 97 chrX 15369850 intron acj6 - chrX 15369898 intron acj6 - chrX 15369947 intron acj6 - chrX_4_15365001 chrX_15365001 S1 2168 chrX 15413046 15413085 chrX 15417349 15417388 Juan 11 4303 3.5 1.0 2.2 3.4 4342 chrX 15413046 intron Cngl - chrX 15415217 intron Cngl - chrX 15417388 intron Cngl - chrX_11_15415001 chrX_15415001 S1 2169 chrX 15824634 15824641 chrX 15824718 15824725 7 84 6.0 7.0 6.5 0.9 91 chrX 15824634 3` UTR sd + chrX 15824680 3` UTR sd + chrX 15824725 3` UTR sd + chrX_7_15820001 chrX_15820001 S1 2170 chrX 16100648 16100671 chrX 16100761 16100783 7 113 2.5 2.5 2.5 2.0 135 chrX 16100648 intron,intron CG42353 -,CG42354 - chrX 16100716 intron,intron CG42353 -,CG42354 - chrX 16100783 intron,intron CG42353 -,CG42354 - chrX_7_16100001 chrX_16100001 S1 2171 chrX 16129604 16129618 chrX 16134699 16134713 5 5095 7.0 16.0 11.5 0.4 5109 chrX 16129604 intron disco-r - chrX 16132158 intron disco-r - chrX 16134713 intron disco-r - chrX_5_16130001 chrX_16130001 S1 2172 chrX 16222779 16222806 chrX 16231130 16231157 roo 4 8351 2.0 2.0 2.0 1.3 8378 chrX 16222779 intergenic not near genes chrX 16226968 intergenic not near genes chrX 16231157 intergenic not near genes chrX_4_16225001 chrX_16225001 S1 2173 chrX 16295525 16295550 chrX 16295610 16295635 5 85 1.5 0.0 0.8 2.8 110 chrX 16295525 intron CG9911 - chrX 16295580 intron CG9911 - chrX 16295635 intron CG9911 - chrX_5_16295001 chrX_16295001 S1 2174 chrX 16492654 16492675 chrX 16498232 16498253 mdg3 6 5578 1.5 1.0 1.2 2.7 5599 chrX 16492654 intron para - chrX 16495454 intron para - chrX 16498253 intron para - chrX_6_16495001 chrX_16495001 S1 2175 chrX 17011963 17011993 chrX 17012047 17012077 6 81 0.5 2.0 1.2 2.7 114 chrX 17011963 intron CG45002 - chrX 17012020 intron CG45002 - chrX 17012077 intron CG45002 - chrX_6_17010001 chrX_17010001 S1 2176 chrX 17111229 17111252 chrX 17111352 17111375 6 123 0.5 1.5 1.0 3.0 146 chrX 17111229 intron CG5004 + chrX 17111302 intron CG5004 + chrX 17111375 intron CG5004 + chrX_6_17110001 chrX_17110001 S1 2177 chrX 17229958 17229965 chrX 17230062 17230069 4 104 2.0 1.0 1.5 1.6 111 chrX 17229958 intergenic CG10597 - chrX 17230014 intergenic CG10597 - chrX 17230069 intergenic CG10597 - chrX_4_17230001 chrX_17230001 S1 2178 chrX 17282873 17282903 chrX 17282952 17282982 7 79 1.5 0.0 0.8 3.9 109 chrX 17282873 intron CG5445 + chrX 17282928 5` UTR CG5445 + chrX 17282982 intron CG5445 + chrX_7_17280001 chrX_17280001 S1 2179 chrX 17352591 17352623 chrX 17352695 17352727 9 104 0.0 2.5 1.2 4.1 136 chrX 17352591 intergenic not near genes chrX 17352659 intergenic not near genes chrX 17352727 intergenic not near genes chrX_9_17350001 chrX_17350001 S1 2180 chrX 17770841 17770847 chrX 17785375 17785381 4 14534 2.5 0.0 1.2 1.8 14540 chrX 17770841 intron unc-4 + chrX 17778111 3` UTR unc-4 + chrX 17785381 intergenic not near genes chrX_4_17775001 chrX_17775001 S1 2181 chrX 17833401 17833418 chrX 17833690 17833707 4 289 3.5 3.0 3.2 1.0 306 chrX 17833401 intron CG6398 + chrX 17833554 intron CG6398 + chrX 17833707 intron CG6398 + chrX_4_17830001 chrX_17830001 S1 2182 chrX 18122830 18122850 chrX 18122907 18122927 5 77 1.5 2.0 1.8 1.8 97 chrX 18122830 5` UTR CR45606 + chrX 18122878 5` UTR CR45606 + chrX 18122927 intergenic CR45606 + chrX_5_18120001 chrX_18120001 S1 2183 chrX 18194067 18194103 chrX 18194603 18194639 BS 7 536 1.5 0.5 1.0 3.5 572 chrX 18194067 intron Frq2 + chrX 18194353 intron Frq2 + chrX 18194639 intron Frq2 + chrX_7_18190001 chrX_18190001 S1 2184 chrX 18257031 18257055 chrX 18257122 18257150 7 95 4.5 4.5 4.5 1.3 119 chrX 18257031 3` UTR CR45613 - chrX 18257090 3` UTR CR45613 - chrX 18257150 3` UTR CR45613 - chrX_7_18255001 chrX_18255001 S1 2185 chrX 18427381 18427407 chrX 18427793 18427819 4 412 0.5 0.0 0.2 3.3 438 chrX 18427381 intergenic CG42323 + chrX 18427600 intergenic not near genes chrX 18427819 intergenic not near genes chrX_4_18425001 chrX_18425001 S1 2186 chrX 18429497 18429527 chrX 18434809 18434839 Transpac 8 5312 2.0 2.0 2.0 2.7 5342 chrX 18429497 intergenic not near genes chrX 18432168 intergenic not near genes chrX 18434839 intergenic not near genes chrX_8_18430001 chrX_18430001 S1 2187 chrX 18645025 18645046 chrX 18645124 18645145 5 99 1.0 3.0 2.0 1.7 120 chrX 18645025 intron Rip11 - chrX 18645085 intron Rip11 - chrX 18645145 intron Rip11 - chrX_5_18645001 chrX_18645001 S1 2188 chrX 18896521 18896544 chrX 18896633 18896651 5 111 1.0 1.0 1.0 2.5 130 chrX 18896521 3` UTR CG7349 + chrX 18896586 intergenic CG7349 + chrX 18896651 intergenic CG7349 + chrX_5_18895001 chrX_18895001 S1 2189 chrX 19060414 19060436 chrX 19065199 19065221 Doc 4 4785 0.5 3.0 1.8 1.4 4807 chrX 19060414 intron CG14190 + chrX 19062818 intron CG14190 + chrX 19065221 intron CG14190 + chrX_4_19060001 chrX_19060001 S1 2190 chrX 19080323 19080358 chrX 19080430 19080465 8 107 2.5 2.0 2.2 2.5 142 chrX 19080323 intergenic not near genes chrX 19080394 intergenic not near genes chrX 19080465 intergenic not near genes chrX_8_19080001 chrX_19080001 S1 2191 chrX 19098771 19098783 chrX 19098850 19098862 5 79 1.0 1.0 1.0 2.5 91 chrX 19098771 intergenic not near genes chrX 19098816 intergenic not near genes chrX 19098862 intergenic not near genes chrX_5_19095001 chrX_19095001 S1 2192 chrX 19185557 19185567 chrX 19185654 19185664 4 97 0.0 3.5 1.8 1.4 107 chrX 19185557 intron CG33253 + chrX 19185610 intron CG33253 + chrX 19185664 intron CG33253 + chrX_4_19185001 chrX_19185001 S1 2193 chrX 13057299 13057301 chrX 19242812 19242814 23 6185513 5.5 5.0 5.2 3.7 6185515 chrX 13057299 intron rad + chrX 16150056 intergenic not near genes chrX 19242814 intergenic not near genes chrX_23_16150001 chrX_16150001 S1 2194 chrX 19249361 19249387 chrX 19249439 19249458 6 80 0.5 0.0 0.2 5.0 97 chrX 19249361 intron Hs3st-B + chrX 19249410 intron Hs3st-B + chrX 19249458 intron Hs3st-B + chrX_6_19245001 chrX_19245001 S1 2195 chrX 19356998 19357015 chrX 19358440 19358457 NOF 4 1442 1.0 0.0 0.5 2.7 1459 chrX 19356998 intron kek5 + chrX 19357728 intron kek5 + chrX 19358457 intron kek5 + chrX_4_19355001 chrX_19355001 S1 2196 chrX 19380155 19380185 chrX 19380397 19380427 pogo 4 242 2.5 2.0 2.2 1.2 272 chrX 19380155 intron kek5 + chrX 19380291 intron kek5 + chrX 19380427 intron kek5 + chrX_4_19380001 chrX_19380001 S1 2197 chrX 19460097 19460111 chrX 19460214 19460228 4 117 2.0 1.5 1.8 1.4 131 chrX 19460097 intron kek5 + chrX 19460162 intron kek5 + chrX 19460228 intron kek5 + chrX_4_19460001 chrX_19460001 S1 2198 chrX 19472133 19472153 chrX 19472704 19472724 jockey 5 571 2.0 1.5 1.8 1.8 591 chrX 19472133 intergenic kek5 + chrX 19472428 intergenic not near genes chrX 19472724 intergenic not near genes chrX_5_19470001 chrX_19470001 S1 2199 chrX 19607077 19607106 chrX 19607165 19607194 11 88 1.5 3.5 2.5 3.1 117 chrX 19607077 intron CG14207 + chrX 19607136 intron CG14207 + chrX 19607194 intron CG14207 + chrX_11_19605001 chrX_19605001 S1 2200 chrX 19669869 19669877 chrX 19670134 19670142 5 265 4.5 3.5 4.0 1.0 273 chrX 19669869 intron Zw + chrX 19670006 intron Zw + chrX 19670142 intron Zw + chrX_5_19670001 chrX_19670001 S1 2201 chrX 19710072 19710104 chrX 19711859 19711891 S-element 7 1787 1.5 3.5 2.5 2.0 1819 chrX 19710072 intron meso18E - chrX 19710982 intron meso18E - chrX 19711891 intron meso18E - chrX_7_19710001 chrX_19710001 S1 2202 chrX 19744635 19744659 chrX 19744762 19744786 11 125 16.5 18.0 17.2 0.6 151 chrX 19744635 5` UTR,exon CG33932 +,Rpp20 + chrX 19744710 intron,intron CG33932 +,Rpp20 + chrX 19744786 5` UTR,exon CG33932 +,Rpp20 + chrX_11_19740001 chrX_19740001 S1 2203 chrX 19881454 19881475 chrX 19881536 19881557 6 82 1.5 1.5 1.5 2.4 103 chrX 19881454 intron Hers + chrX 19881506 intron Hers + chrX 19881557 intron Hers + chrX_6_19880001 chrX_19880001 S1 2204 chrX 19884089 19884121 chrX 19884166 19884179 5 73 1.5 1.5 1.5 2.0 90 chrX 19884089 intron Hers + chrX 19884134 intron Hers + chrX 19884179 intron Hers + chrX_5_19880001 chrX_19880001 S1 2205 chrX 19897379 19897415 chrX 19897457 19897493 5 78 2.0 0.5 1.2 2.3 114 chrX 19897379 intron Hers + chrX 19897436 intron Hers + chrX 19897493 intron Hers + chrX_5_19895001 chrX_19895001 S1 2206 chrX 19984397 19984412 chrX 19984679 19984694 5 281 0.0 2.0 1.0 2.5 297 chrX 19984397 intergenic not near genes chrX 19984546 intergenic not near genes chrX 19984694 intergenic not near genes chrX_5_19980001 chrX_19980001 S1 2207 chrX 19992414 19992434 chrX 19992491 19992502 8 76 6.0 6.0 6.0 1.1 88 chrX 19992414 intergenic not near genes chrX 19992458 intergenic not near genes chrX 19992502 intergenic not near genes chrX_8_19990001 chrX_19990001 S1 2208 chrX 20263434 20263439 chrX 20263524 20263530 4 90 3.5 1.0 2.2 1.2 96 chrX 20263434 intergenic not near genes chrX 20263482 intergenic not near genes chrX 20263530 intergenic not near genes chrX_4_20260001 chrX_20260001 S1 2209 chrX 20377326 20377348 chrX 20378794 20378816 hobo 10 1468 3.5 4.0 3.8 2.1 1490 chrX 20377326 intergenic not near genes chrX 20378071 intergenic not near genes chrX 20378816 intergenic not near genes chrX_10_20375001 chrX_20375001 S1 2210 chrX 20437376 20437392 chrX 20437940 20437968 4 573 2.5 0.5 1.5 1.6 592 chrX 20437376 intron CG1695 + chrX 20437672 intron CG1695 + chrX 20437968 intron CG1695 + chrX_4_20435001 chrX_20435001 S1 2211 chrX 20443169 20443189 chrX 20443246 20443266 4 77 5.0 0.5 2.8 1.1 97 chrX 20443169 exon CG1695 + chrX 20443218 intron CG1695 + chrX 20443266 intron CG1695 + chrX_4_20440001 chrX_20440001 S1 2212 chrX 20464118 20464148 chrX 20467686 20467716 12 3570 21.0 17.5 19.2 0.6 3598 chrX 20464118 exon CG32506 + chrX 20465917 3` UTR CG32506 + chrX 20467716 5` UTR GstT3 + chrX_12_20465001 chrX_20465001 S1 2213 chrX 20468021 20468038 chrX 20468110 20468128 5 90 2.0 0.0 1.0 2.5 107 chrX 20468021 intron GstT3 + chrX 20468074 intron GstT3 + chrX 20468128 intron GstT3 + chrX_5_20465001 chrX_20465001 S1 2214 chrX 20504123 20504156 chrX 20505645 20505678 transib2 10 1522 3.0 3.5 3.2 2.4 1555 chrX 20504123 intron RhoGAP19D - chrX 20504900 intron RhoGAP19D - chrX 20505678 intron RhoGAP19D - chrX_10_20500001 chrX_20500001 S1 2215 chrX 20741582 20741610 chrX 20741659 20741687 6 77 1.0 0.0 0.5 4.0 105 chrX 20741582 intergenic not near genes chrX 20741634 intergenic not near genes chrX 20741687 intergenic not near genes chrX_6_20740001 chrX_20740001 S1 2216 chrX 20836737 20836758 chrX 20844340 20844361 roo 4 7603 0.0 3.5 1.8 1.4 7624 chrX 20836737 intron shakB - chrX 20840549 intron shakB - chrX 20844361 intron shakB - chrX_4_20840001 chrX_20840001 S1 2217 chrX 20897937 20897948 chrX 20898028 20898039 4 91 3.0 0.0 1.5 1.6 102 chrX 20897937 intron shakB - chrX 20897988 intron shakB - chrX 20898039 intron shakB - chrX_4_20895001 chrX_20895001 S1 2218 chrX 20915042 20915072 chrX 20915214 20915244 8 172 1.5 1.0 1.2 3.6 202 chrX 20915042 intron shakB - chrX 20915143 intron shakB - chrX 20915244 intron shakB - chrX_8_20915001 chrX_20915001 S1 2219 chrX 20940721 20940755 chrX 20942191 20942225 hobo 9 1470 1.5 3.0 2.2 2.8 1504 chrX 20940721 intergenic not near genes chrX 20941473 intergenic not near genes chrX 20942225 intergenic not near genes chrX_9_20940001 chrX_20940001 S1 2220 chrX 20981037 20981060 chrX 20981141 20981164 8 104 0.0 2.5 1.2 3.6 127 chrX 20981037 intergenic not near genes chrX 20981100 intergenic not near genes chrX 20981164 intergenic not near genes chrX_8_20980001 chrX_20980001 S1 2221 chrX 22259780 22259785 chrX 22382680 22382685 4 122900 61.0 9.5 35.2 0.1 122905 chrX 22259780 intergenic not near genes chrX 22321232 intergenic not near genes chrX 22382685 intergenic not near genes chrX_4_22320001 chrX_22320001 S1 2222 chrX 22996309 22996327 chrX 23003544 23003562 roo 6 7235 2.5 0.5 1.5 2.4 7253 chrX 22996309 intron,intron stnA -,stnB - chrX 22999936 intron,intron stnA -,stnB - chrX 23003562 intron,intron stnA -,stnB - chrX_6_22995001 chrX_22995001 S1 2223 chrY 311341 311345 chrY 311459 311463 6 118 5.0 5.0 5.0 1.0 122 chrY 311341 intergenic not near genes chrY 311402 intergenic not near genes chrY 311463 intergenic not near genes chrY_6_310001 chrY_310001 S1 2224 chrY 380971 380980 chrY 381054 381063 9 83 8.5 7.5 8.0 1.0 92 chrY 380971 intergenic not near genes chrY 381017 intergenic not near genes chrY 381063 intergenic not near genes chrY_9_380001 chrY_380001 S1 2225 chrY 655947 655974 chrY 656124 656151 6 177 1.0 1.5 1.2 2.7 204 chrY 655947 intron kl-2 + chrY 656049 intron kl-2 + chrY 656151 exon kl-2 + chrY_6_655001 chrY_655001 S1 2226 chrY 833122 833138 chrY 833199 833215 5 77 2.0 0.5 1.2 2.3 93 chrY 833122 intergenic not near genes chrY 833168 intergenic not near genes chrY 833215 intergenic not near genes chrY_5_830001 chrY_830001 S1 2227 chrY 975594 975618 chrY 975712 976010 6 209 387.5 526.5 457.0 0.0 416 chrY 975594 intergenic not near genes chrY 975802 intergenic not near genes chrY 976010 intergenic not near genes chrY_6_975001 chrY_975001 S1 2228 chrY 975790 975818 chrY 975871 975899 50 89 463.0 538.0 500.5 0.1 109 chrY 975790 intergenic not near genes chrY 975844 intergenic not near genes chrY 975899 intergenic not near genes chrY_50_975001 chrY_975001 S1 2229 chrY 1419901 1419931 chrY 1420156 1420186 7 255 1.0 1.0 1.0 3.5 285 chrY 1419901 intergenic not near genes chrY 1420044 intergenic not near genes chrY 1420186 intergenic not near genes chrY_7_1420001 chrY_1420001 S1 2230 chrY 1420643 1420649 chrY 1420788 1420794 4 145 0.0 7.5 3.8 0.8 151 chrY 1420643 intergenic not near genes chrY 1420718 intergenic not near genes chrY 1420794 intergenic not near genes chrY_4_1420001 chrY_1420001 S1 2231 chrY 2761742 2761753 chrY 2761831 2761842 6 89 15.0 22.0 18.5 0.3 100 chrY 2761742 intergenic not near genes chrY 2761792 intergenic not near genes chrY 2761842 intergenic not near genes chrY_6_2760001 chrY_2760001 S1 2232 chrY 3664989 3665013 chrY 3665094 3665118 4 105 1.5 1.0 1.2 1.8 129 chrY 3664989 intergenic CG40948 + chrY 3665054 intergenic CG40948 + chrY 3665118 intergenic not near genes chrY_4_3665001 chrY_3665001 S1 2233 chrY 3666436 3666453 chrY 3666590 3666607 6 154 4.0 1.5 2.8 1.6 171 chrY 3666436 intergenic not near genes chrY 3666522 intergenic not near genes chrY 3666607 intergenic not near genes chrY_6_3665001 chrY_3665001 S1