SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 47406 47461 chr2L 52587 52641 jockey 13 5181 4.5 6.5 5.5 2.0 5235 chr2L 47406 intron Cda5 - chr2L 50024 intron Cda5 - chr2L 52641 intron Cda5 - chr2L_13_50001 chr2L_50001 OSS_C 2 chr2L 45974 46044 chr2L 53332 53402 jockey 6 7358 27.5 8.5 18.0 0.3 7428 chr2L 45974 intron Cda5 - chr2L 49688 intron Cda5 - chr2L 53402 intron Cda5 - chr2L_6_45001 chr2L_45001 OSS_C 4 chr2L 347831 347898 chr2L 355407 355474 blood 8 7576 4.0 1.0 2.5 2.3 7643 chr2L 347831 3` UTR Plc21C + chr2L 351652 intron Plc21C + chr2L 355474 3` UTR Plc21C + chr2L_8_350001 chr2L_350001 OSS_C 11 chr2L 686852 686934 chr2L 695968 696050 roo 4 9116 5.0 2.0 3.5 0.9 9198 chr2L 686852 intron ds - chr2L 691451 intron ds - chr2L 696050 intron ds - chr2L_4_690001 chr2L_690001 OSS_C 15 chr2L 770400 770469 chr2L 772257 772326 Bari1 17 1857 6.5 5.0 5.8 2.5 1926 chr2L 770400 intergenic not near genes chr2L 771363 intergenic not near genes chr2L 772326 intergenic CR44614 + chr2L_17_770001 chr2L_770001 OSS_C 19 chr2L 976820 976906 chr2L 984532 984618 roo 6 7712 1.0 2.5 1.8 2.1 7798 chr2L 976820 intergenic not near genes chr2L 980719 intergenic not near genes chr2L 984618 intergenic not near genes chr2L_6_980001 chr2L_980001 OSS_C 34 chr2L 1570627 1570700 chr2L 1573575 1573648 F-element 17 2948 4.0 3.0 3.5 3.8 3021 chr2L 1570627 intron haf + chr2L 1572138 intron haf + chr2L 1573648 intron haf + chr2L_17_1570001 chr2L_1570001 OSS_C 35 chr2L 1618201 1618230 chr2L 1618607 1618635 jockey 6 406 10.0 0.0 5.0 1.0 434 chr2L 1618201 intergenic CR44603 - chr2L 1618418 intergenic CR44603 - chr2L 1618635 intergenic CR44603 - chr2L_6_1615001 chr2L_1615001 OSS_C 39 chr2L 1678914 1678952 chr2L 1686473 1686511 blood 9 7559 2.0 9.0 5.5 1.4 7597 chr2L 1678914 intron chinmo + chr2L 1682712 intron chinmo + chr2L 1686511 intron chinmo + chr2L_9_1680001 chr2L_1680001 OSS_C 41 chr2L 1711295 1711357 chr2L 1711695 1711757 mdg3 15 400 8.0 11.0 9.5 1.4 462 chr2L 1711295 3` UTR mRpL48 + chr2L 1711526 3` UTR frtz - chr2L 1711757 exon frtz - chr2L_15_1710001 chr2L_1710001 OSS_C 50 chr2L 2100381 2100388 chr2L 2109608 2109615 roo 4 9227 5.0 7.5 6.2 0.6 9234 chr2L 2100381 intron dpr3 - chr2L 2104998 intron dpr3 - chr2L 2109615 intron dpr3 - chr2L_4_2100001 chr2L_2100001 OSS_C 51 chr2L 2112042 2112129 chr2L 2119779 2119867 opus 16 7738 3.5 3.5 3.5 3.6 7825 chr2L 2112042 intergenic not near genes chr2L 2115954 intergenic not near genes chr2L 2119867 intergenic not near genes chr2L_16_2115001 chr2L_2115001 OSS_C 55 chr2L 2293981 2294061 chr2L 2299262 2299341 copia 23 5281 2.0 9.5 5.8 3.4 5360 chr2L 2293981 intergenic not near genes chr2L 2296661 intergenic not near genes chr2L 2299341 intergenic not near genes chr2L_23_2295001 chr2L_2295001 OSS_C 64 chr2L 2661147 2661213 chr2L 2663061 2663127 I-element 12 1914 1.5 3.0 2.2 3.8 1980 chr2L 2661147 intergenic not near genes chr2L 2662137 intergenic not near genes chr2L 2663127 intergenic not near genes chr2L_12_2660001 chr2L_2660001 OSS_C 66 chr2L 2772591 2772611 chr2L 2779250 2779268 297 4 6658 2.5 2.5 2.5 1.1 6677 chr2L 2772591 3` UTR Syt1 - chr2L 2775930 intron Syt1 - chr2L 2779268 3` UTR Syt1 - chr2L_4_2775001 chr2L_2775001 OSS_C 73 chr2L 3072970 3073046 chr2L 3078248 3078325 copia 13 5279 3.5 7.0 5.2 2.1 5355 chr2L 3072970 intron toc - chr2L 3075648 intron toc - chr2L 3078325 intron toc - chr2L_13_3075001 chr2L_3075001 OSS_C 80 chr2L 3202679 3202768 chr2L 3210184 3210254 mdg1 4 7500 1.0 2.0 1.5 1.6 7575 chr2L 3202679 intergenic not near genes chr2L 3206466 intergenic not near genes chr2L 3210254 intergenic CR45336 + chr2L_4_3205001 chr2L_3205001 OSS_C 87 chr2L 3388544 3388617 chr2L 3388861 3388934 pogo 4 317 1.5 3.0 2.2 1.2 390 chr2L 3388544 intergenic CG42460 - chr2L 3388739 intergenic CG42460 - chr2L 3388934 intergenic CR44791 +,CG42460 - chr2L_4_3385001 chr2L_3385001 OSS_C 96 chr2L 3649748 3649799 chr2L 3655026 3655077 copia 6 5278 1.0 10.5 5.8 0.9 5329 chr2L 3649748 intron for - chr2L 3652412 intron for - chr2L 3655077 intron for - chr2L_6_3650001 chr2L_3650001 OSS_C 106 chr2L 4065980 4066031 chr2L 4068880 4068933 Juan 9 2901 8.5 4.0 6.2 1.2 2953 chr2L 4065980 intron ed + chr2L 4067456 intron ed + chr2L 4068933 intron ed + chr2L_9_4065001 chr2L_4065001 OSS_C 122 chr2L 4601636 4601721 chr2L 4609153 4609238 mdg1 11 7517 9.5 9.5 9.5 1.0 7602 chr2L 4601636 intron dp - chr2L 4605437 intron dp - chr2L 4609238 intron dp - chr2L_11_4605001 chr2L_4605001 OSS_C 123 chr2L 4661781 4661839 chr2L 4669437 4669495 opus 4 7656 4.0 6.5 5.2 0.6 7714 chr2L 4661781 intergenic not near genes chr2L 4665638 intergenic not near genes chr2L 4669495 intergenic not near genes chr2L_4_4665001 chr2L_4665001 OSS_C 130 chr2L 4918112 4918174 chr2L 4923261 4923322 jockey 11 5149 4.0 4.5 4.2 2.1 5210 chr2L 4918112 intron hoe1 - chr2L 4920717 intron hoe1 - chr2L 4923322 intron hoe1 - chr2L_11_4920001 chr2L_4920001 OSS_C 137 chr2L 5342715 5342772 chr2L 5345170 5345228 Doc 5 2455 3.5 6.5 5.0 0.8 2513 chr2L 5342715 intergenic CG12512 - chr2L 5343972 intergenic not near genes chr2L 5345228 intergenic not near genes chr2L_5_5340001 chr2L_5340001 OSS_C 145 chr2L 5827651 5827706 chr2L 5836735 5836790 roo 6 9084 13.0 5.0 9.0 0.6 9139 chr2L 5827651 intron TrissinR + chr2L 5832220 intron TrissinR + chr2L 5836790 intron TrissinR + chr2L_6_5830001 chr2L_5830001 OSS_C 165 chr2L 6363105 6363168 chr2L 6366107 6366170 Burdock 18 2999 2.5 9.0 5.8 2.6 3065 chr2L 6363105 intergenic not near genes chr2L 6364638 intergenic not near genes chr2L 6366170 intergenic not near genes chr2L_18_6360001 chr2L_6360001 OSS_C 166 chr2L 6426791 6426875 chr2L 6445127 6445211 roo 25 18336 10.0 6.5 8.2 2.7 18420 chr2L 6426791 3` UTR CG9527 - chr2L 6436001 intron CG9527 - chr2L 6445211 exon CG9527 - chr2L_25_6435001 chr2L_6435001 OSS_C 178 chr2L 6876715 6876789 chr2L 6882981 6883055 diver 14 6266 4.0 1.5 2.8 3.7 6340 chr2L 6876715 intron Nlg2 + chr2L 6879885 intron Nlg2 + chr2L 6883055 intron Nlg2 + chr2L_14_6875001 chr2L_6875001 OSS_C 189 chr2L 7343269 7343343 chr2L 7350460 7350534 roo 23 7192 5.0 7.0 6.0 3.3 7265 chr2L 7343269 intron Wnt6 + chr2L 7346902 intron Wnt6 + chr2L 7350534 intron Wnt6 + chr2L_23_7345001 chr2L_7345001 OSS_C 198 chr2L 7887653 7887676 chr2L 7887811 7887834 INE-1 6 158 2.0 5.0 3.5 1.3 181 chr2L 7887653 intergenic Spn28Da -,CG7102 - chr2L 7887744 3` UTR Spn28Da - chr2L 7887834 exon Spn28Da - chr2L_6_7885001 chr2L_7885001 OSS_C 200 chr2L 7958982 7959070 chr2L 7960468 7960559 pogo 11 1487 4.0 2.5 3.2 2.6 1577 chr2L 7958982 intron Snoo - chr2L 7959770 intron Snoo - chr2L 7960559 intron Snoo - chr2L_11_7955001 chr2L_7955001 OSS_C 201 chr2L 7977029 7977082 chr2L 7984080 7984133 297 6 7051 5.5 4.0 4.8 1.0 7104 chr2L 7977029 intron Snoo - chr2L 7980581 intron Snoo - chr2L 7984133 5` UTR,5` UTR Snoo -,CG7231 + chr2L_6_7980001 chr2L_7980001 OSS_C 203 chr2L 8013593 8013647 chr2L 8023603 8023658 copia 7 10011 1.5 2.5 2.0 2.3 10065 chr2L 8013593 intron Tg + chr2L 8018626 intron Tg + chr2L 8023658 intron Tg + chr2L_7_8015001 chr2L_8015001 OSS_C 214 chr2L 8452359 8452434 chr2L 8461605 8461680 roo 17 9246 3.5 4.0 3.8 3.5 9321 chr2L 8452359 intron fu12 - chr2L 8457020 intron fu12 - chr2L 8461680 intron fu12 - chr2L_17_8455001 chr2L_8455001 OSS_C 223 chr2L 8723056 8723136 chr2L 8731509 8731588 Tirant 12 8452 4.5 9.0 6.8 1.5 8532 chr2L 8723056 intron raw - chr2L 8727322 intron raw - chr2L 8731588 intron raw - chr2L_12_8725001 chr2L_8725001 OSS_C 229 chr2L 9000216 9000260 chr2L 9007802 9007845 roo 8 7586 6.0 0.0 3.0 2.0 7629 chr2L 9000216 intergenic Try29F + chr2L 9004030 intergenic not near genes chr2L 9007845 intergenic not near genes chr2L_8_9000001 chr2L_9000001 OSS_C 233 chr2L 9217921 9218002 chr2L 9222783 9222873 Doc 8 4868 0.5 3.5 2.0 2.7 4952 chr2L 9217921 intron tai + chr2L 9220397 intron tai + chr2L 9222873 intron tai + chr2L_8_9220001 chr2L_9220001 OSS_C 244 chr2L 9393447 9393506 chr2L 9396490 9396549 jockey 8 3043 5.5 3.0 4.2 1.5 3102 chr2L 9393447 intron Shawl - chr2L 9394998 intron Shawl - chr2L 9396549 intron Shawl - chr2L_8_9390001 chr2L_9390001 OSS_C 254 chr2L 9973662 9973748 chr2L 9980857 9980943 HMS-Beagle 17 7195 1.5 5.5 3.5 3.8 7281 chr2L 9973662 intergenic not near genes chr2L 9977302 intergenic not near genes chr2L 9980943 intergenic not near genes chr2L_17_9975001 chr2L_9975001 OSS_C 260 chr2L 10138124 10138183 chr2L 10143444 10143500 Rt1c 6 5318 3.5 11.0 7.2 0.7 5376 chr2L 10138124 intron CG44153 - chr2L 10140812 intron CG44153 - chr2L 10143500 intron CG44153 - chr2L_6_10140001 chr2L_10140001 OSS_C 261 chr2L 10156179 10156257 chr2L 10164104 10164183 blood 10 7926 8.5 8.0 8.2 1.1 8004 chr2L 10156179 intron,3` UTR CG44153 -,CG4839 + chr2L 10160181 intron CG44153 - chr2L 10164183 intron CG44153 - chr2L_10_10160001 chr2L_10160001 OSS_C 268 chr2L 10592788 10592865 chr2L 10600525 10600608 opus 11 7738 1.5 6.0 3.8 2.3 7820 chr2L 10592788 intron Trim9 + chr2L 10596698 intron Trim9 + chr2L 10600608 intron Trim9 + chr2L_11_10595001 chr2L_10595001 OSS_C 272 chr2L 10862793 10862852 chr2L 10864483 10864542 Rt1c 15 1690 5.5 5.0 5.2 2.4 1749 chr2L 10862793 intron CR43807 - chr2L 10863668 intron CR43807 - chr2L 10864542 3` UTR CR43807 - chr2L_15_10860001 chr2L_10860001 OSS_C 276 chr2L 10946884 10946962 chr2L 10956175 10956252 roo 17 9291 7.5 7.0 7.2 2.1 9368 chr2L 10946884 intron dpr2 - chr2L 10951568 intron dpr2 - chr2L 10956252 intron dpr2 - chr2L_17_10950001 chr2L_10950001 OSS_C 282 chr2L 11215084 11215102 chr2L 11218750 11218768 Doc 7 3666 2.0 5.0 3.5 1.6 3684 chr2L 11215084 intron ab + chr2L 11216926 intron ab + chr2L 11218768 intron ab + chr2L_7_11215001 chr2L_11215001 OSS_C 286 chr2L 11315196 11315270 chr2L 11317676 11317750 G2 10 2480 4.0 0.0 2.0 3.3 2554 chr2L 11315196 intergenic not near genes chr2L 11316473 intergenic not near genes chr2L 11317750 intergenic not near genes chr2L_10_11315001 chr2L_11315001 OSS_C 295 chr2L 11540539 11540588 chr2L 11548017 11548065 Tabor 4 7478 3.0 1.5 2.2 1.2 7526 chr2L 11540539 intergenic not near genes chr2L 11544302 intergenic not near genes chr2L 11548065 intergenic not near genes chr2L_4_11540001 chr2L_11540001 OSS_C 297 chr2L 11563603 11563644 chr2L 11568882 11568923 copia 7 5280 6.0 4.5 5.2 1.1 5320 chr2L 11563603 intergenic not near genes chr2L 11566263 intergenic not near genes chr2L 11568923 intergenic not near genes chr2L_7_11565001 chr2L_11565001 OSS_C 298 chr2L 11614003 11614066 chr2L 11615573 11615637 hopper2 13 1571 5.5 1.5 3.5 2.9 1634 chr2L 11614003 intron kek2 + chr2L 11614820 intron kek2 + chr2L 11615637 intron kek2 + chr2L_13_11610001 chr2L_11610001 OSS_C 299 chr2L 11713466 11713521 chr2L 11721010 11721064 blood 9 7544 4.5 4.5 4.5 1.6 7598 chr2L 11713466 intergenic not near genes chr2L 11717265 intergenic not near genes chr2L 11721064 intergenic CR44143 + chr2L_9_11715001 chr2L_11715001 OSS_C 304 chr2L 12067270 12067344 chr2L 12074398 12074471 297 7 7128 1.5 4.0 2.8 1.8 7201 chr2L 12067270 intergenic CG14946 - chr2L 12070870 intergenic not near genes chr2L 12074471 intergenic not near genes chr2L_7_12070001 chr2L_12070001 OSS_C 317 chr2L 12558294 12558332 chr2L 12565498 12565536 HMS-Beagle 6 7205 2.5 4.5 3.5 1.3 7242 chr2L 12558294 intergenic not near genes chr2L 12561915 intergenic not near genes chr2L 12565536 intergenic not near genes chr2L_6_12560001 chr2L_12560001 OSS_C 318 chr2L 12731006 12731075 chr2L 12735848 12735918 F-element 15 4842 5.5 5.5 5.5 2.3 4912 chr2L 12731006 intron MRP + chr2L 12733462 intron MRP + chr2L 12735918 intron MRP + chr2L_15_12730001 chr2L_12730001 OSS_C 319 chr2L 12739110 12739188 chr2L 12743967 12744044 Doc 14 4857 4.5 6.0 5.2 2.3 4934 chr2L 12739110 exon MRP + chr2L 12741577 intron MRP + chr2L 12744044 exon MRP + chr2L_14_12740001 chr2L_12740001 OSS_C 322 chr2L 12781756 12781800 chr2L 12789275 12789319 Quasimodo 4 7519 8.5 6.5 7.5 0.5 7563 chr2L 12781756 intergenic not near genes chr2L 12785538 intergenic not near genes chr2L 12789319 intergenic not near genes chr2L_4_12785001 chr2L_12785001 OSS_C 323 chr2L 12791570 12791611 chr2L 12795321 12795361 F-element 6 3751 0.5 2.0 1.2 2.7 3791 chr2L 12791570 intergenic not near genes chr2L 12793466 intergenic not near genes chr2L 12795361 intergenic not near genes chr2L_6_12790001 chr2L_12790001 OSS_C 324 chr2L 12861639 12861701 chr2L 12863182 12863244 hobo 10 1543 2.5 9.0 5.8 1.5 1605 chr2L 12861639 intergenic not near genes chr2L 12862442 intergenic not near genes chr2L 12863244 intergenic not near genes chr2L_10_12860001 chr2L_12860001 OSS_C 325 chr2L 12893961 12894033 chr2L 12895504 12895575 hobo 23 1543 4.0 8.0 6.0 3.3 1614 chr2L 12893961 intergenic not near genes chr2L 12894768 intergenic not near genes chr2L 12895575 intergenic not near genes chr2L_23_12890001 chr2L_12890001 OSS_C 326 chr2L 12933788 12933867 chr2L 12941331 12941409 blood 16 7542 6.5 8.5 7.5 1.9 7621 chr2L 12933788 intergenic not near genes chr2L 12937598 intergenic not near genes chr2L 12941409 intergenic not near genes chr2L_16_12935001 chr2L_12935001 OSS_C 337 chr2L 13405591 13405666 chr2L 13410464 13410539 Doc 16 4873 7.5 4.5 6.0 2.3 4948 chr2L 13405591 exon CG7110 + chr2L 13408065 intron CG7110 + chr2L 13410539 exon CG7110 + chr2L_16_13405001 chr2L_13405001 OSS_C 339 chr2L 13481391 13481440 chr2L 13482073 13482123 jockey 11 683 5.0 13.0 9.0 1.1 732 chr2L 13481391 intron CG42784 + chr2L 13481757 intron CG42784 + chr2L 13482123 intron CG42784 + chr2L_11_13480001 chr2L_13480001 OSS_C 341 chr2L 13522110 13522138 chr2L 13527703 13527732 Transpac 7 5593 1.0 12.5 6.8 0.9 5622 chr2L 13522110 intron B4 - chr2L 13524921 intron B4 - chr2L 13527732 intron B4 - chr2L_7_13520001 chr2L_13520001 OSS_C 343 chr2L 13560340 13560420 chr2L 13565236 13565317 F-element 11 4897 1.5 6.0 3.8 2.3 4977 chr2L 13560340 intron kuz + chr2L 13562828 intron kuz + chr2L 13565317 intron kuz + chr2L_11_13560001 chr2L_13560001 OSS_C 349 chr2L 13761756 13761796 chr2L 13762943 13762982 Doc 13 1186 4.0 8.0 6.0 1.9 1226 chr2L 13761756 intron TM9SF4 + chr2L 13762369 intron TM9SF4 + chr2L 13762982 intron TM9SF4 + chr2L_13_13760001 chr2L_13760001 OSS_C 353 chr2L 13853027 13853086 chr2L 13862253 13862312 roo 14 9226 5.0 4.0 4.5 2.5 9285 chr2L 13853027 intron CenG1A + chr2L 13857670 intron CenG1A + chr2L 13862312 intron CenG1A + chr2L_14_13855001 chr2L_13855001 OSS_C 374 chr2L 14618844 14618889 chr2L 14619301 14619345 jockey 6 457 6.5 2.0 4.2 1.2 501 chr2L 14618844 intron,3` UTR,3` UTR osp -,Adh +,Adhr + chr2L 14619094 intron osp - chr2L 14619345 intron osp - chr2L_6_14615001 chr2L_14615001 OSS_C 377 chr2L 14803814 14803896 chr2L 14809093 14809174 copia 10 5279 5.5 6.0 5.8 1.5 5360 chr2L 14803814 intergenic not near genes chr2L 14806494 intergenic not near genes chr2L 14809174 intergenic not near genes chr2L_10_14805001 chr2L_14805001 OSS_C 382 chr2L 14889889 14889954 chr2L 14890390 14890455 jockey 9 501 6.0 4.5 5.2 1.5 566 chr2L 14889889 intergenic not near genes chr2L 14890172 intergenic not near genes chr2L 14890455 intergenic not near genes chr2L_9_14890001 chr2L_14890001 OSS_C 386 chr2L 14984338 14984398 chr2L 14992015 14992075 opus 6 7677 1.5 7.0 4.2 1.2 7737 chr2L 14984338 intron mol - chr2L 14988206 intron mol - chr2L 14992075 intron mol - chr2L_6_14985001 chr2L_14985001 OSS_C 395 chr2L 15445986 15446062 chr2L 15453531 15453606 blood 5 7544 5.5 0.0 2.8 1.3 7620 chr2L 15445986 intergenic not near genes chr2L 15449796 intergenic not near genes chr2L 15453606 intergenic not near genes chr2L_5_15445001 chr2L_15445001 OSS_C 401 chr2L 15586348 15586423 chr2L 15593476 15593550 297 8 7128 1.0 2.5 1.8 2.9 7202 chr2L 15586348 intergenic not near genes chr2L 15589949 intergenic not near genes chr2L 15593550 intergenic not near genes chr2L_8_15585001 chr2L_15585001 OSS_C 406 chr2L 15826822 15826881 chr2L 15829292 15829350 Tabor 6 2470 1.5 4.0 2.8 1.6 2528 chr2L 15826822 intergenic not near genes chr2L 15828086 intergenic not near genes chr2L 15829350 intergenic not near genes chr2L_6_15825001 chr2L_15825001 OSS_C 407 chr2L 15955962 15956017 chr2L 15957505 15957560 hobo 9 1543 3.5 3.5 3.5 2.0 1598 chr2L 15955962 intron beat-Ib - chr2L 15956761 intron beat-Ib - chr2L 15957560 intron beat-Ib - chr2L_9_15955001 chr2L_15955001 OSS_C 412 chr2L 16141098 16141179 chr2L 16146394 16146461 copia 4 5293 0.0 6.0 3.0 1.0 5363 chr2L 16141098 intergenic not near genes chr2L 16143780 intergenic not near genes chr2L 16146461 intergenic not near genes chr2L_4_16140001 chr2L_16140001 OSS_C 413 chr2L 16153682 16153750 chr2L 16160812 16160880 297 19 7135 5.5 4.5 5.0 3.2 7198 chr2L 16153682 intergenic not near genes chr2L 16157281 intergenic not near genes chr2L 16160880 intergenic not near genes chr2L_19_16155001 chr2L_16155001 OSS_C 416 chr2L 16280250 16280270 chr2L 16281496 16281513 1360 10 1246 6.0 6.5 6.2 1.4 1263 chr2L 16280250 intron crp - chr2L 16280882 intron crp - chr2L 16281513 intron crp - chr2L_10_16280001 chr2L_16280001 OSS_C 421 chr2L 16511928 16511971 chr2L 16519131 16519174 HMS-Beagle 6 7202 2.5 3.5 3.0 1.5 7246 chr2L 16511928 intron CG5953 - chr2L 16515551 intron CG5953 - chr2L 16519174 intron CG5953 - chr2L_6_16515001 chr2L_16515001 OSS_C 433 chr2L 16958060 16958114 chr2L 16962923 16962977 Doc 4 4864 1.5 3.5 2.5 1.1 4917 chr2L 16958060 intergenic not near genes chr2L 16960518 intergenic not near genes chr2L 16962977 intergenic not near genes chr2L_4_16960001 chr2L_16960001 OSS_C 446 chr2L 17167508 17167578 chr2L 17167824 17167895 pogo 10 316 5.0 1.5 3.2 2.4 387 chr2L 17167508 intron,intron CG34106 +,beat-IIIa + chr2L 17167702 intron,intron CG34106 +,beat-IIIa + chr2L 17167895 intron,intron CG34106 +,beat-IIIa + chr2L_10_17165001 chr2L_17165001 OSS_C 448 chr2L 17199099 17199172 chr2L 17200641 17200714 hobo 5 1542 2.0 4.0 3.0 1.2 1615 chr2L 17199099 intron beat-IIIc - chr2L 17199906 intron beat-IIIc - chr2L 17200714 intron beat-IIIc - chr2L_5_17195001 chr2L_17195001 OSS_C 451 chr2L 17273126 17273210 chr2L 17277985 17278069 F-element 6 4859 5.0 1.5 3.2 1.4 4943 chr2L 17273126 intergenic not near genes chr2L 17275598 intergenic not near genes chr2L 17278069 intergenic not near genes chr2L_6_17275001 chr2L_17275001 OSS_C 456 chr2L 17335466 17335480 chr2L 17336723 17336737 1360 4 1257 7.5 1.0 4.2 0.8 1271 chr2L 17335466 intergenic not near genes chr2L 17336102 intergenic not near genes chr2L 17336737 intergenic not near genes chr2L_4_17335001 chr2L_17335001 OSS_C 463 chr2L 17687445 17687521 chr2L 17692266 17692342 F-element 16 4820 4.5 6.5 5.5 2.5 4897 chr2L 17687445 intron CadN - chr2L 17689894 intron CadN - chr2L 17692342 intron CadN - chr2L_16_17685001 chr2L_17685001 OSS_C 467 chr2L 17727800 17727861 chr2L 17729343 17729406 hobo 10 1543 0.0 5.5 2.8 2.6 1606 chr2L 17727800 intron CadN - chr2L 17728603 intron CadN - chr2L 17729406 intron CadN - chr2L_10_17725001 chr2L_17725001 OSS_C 469 chr2L 17819865 17819935 chr2L 17825145 17825215 copia 11 5279 5.0 7.5 6.2 1.5 5350 chr2L 17819865 intron CadN2 - chr2L 17822540 intron CadN2 - chr2L 17825215 intron CadN2 - chr2L_11_17820001 chr2L_17820001 OSS_C 470 chr2L 17911909 17911973 chr2L 17914162 17914226 pogo 16 2254 5.5 5.0 5.2 2.6 2317 chr2L 17911909 intergenic not near genes chr2L 17913068 intergenic not near genes chr2L 17914226 intergenic CG43271 - chr2L_16_17910001 chr2L_17910001 OSS_C 472 chr2L 17951891 17951966 chr2L 17953433 17953508 hobo 8 1542 7.0 7.5 7.2 1.0 1617 chr2L 17951891 intergenic CR44398 -,CR44397 - chr2L 17952700 intergenic not near genes chr2L 17953508 intergenic not near genes chr2L_8_17950001 chr2L_17950001 OSS_C 475 chr2L 18051813 18051894 chr2L 18061036 18061116 roo 12 9223 3.5 1.5 2.5 3.4 9303 chr2L 18051813 intron rdo + chr2L 18056464 intron rdo + chr2L 18061116 intron rdo + chr2L_12_18055001 chr2L_18055001 OSS_C 484 chr2L 18407980 18408051 chr2L 18412839 18412919 Doc 6 4861 5.5 3.0 4.2 1.2 4939 chr2L 18407980 intergenic not near genes chr2L 18410450 intergenic not near genes chr2L 18412919 intergenic not near genes chr2L_6_18410001 chr2L_18410001 OSS_C 501 chr2L 19147307 19147382 chr2L 19154418 19154493 297 14 7111 1.0 5.5 3.2 3.3 7186 chr2L 19147307 intron brat + chr2L 19150900 intron brat + chr2L 19154493 intron brat + chr2L_14_19150001 chr2L_19150001 OSS_C 507 chr2L 19344953 19344976 chr2L 19357237 19357260 blood 4 12284 4.5 5.5 5.0 0.7 12307 chr2L 19344953 intron dnt - chr2L 19351106 intron dnt - chr2L 19357260 intron dnt - chr2L_4_19350001 chr2L_19350001 OSS_C 524 chr2L 19620042 19620077 chr2L 19621107 19621142 jockey 6 1065 9.5 9.0 9.2 0.6 1100 chr2L 19620042 intron Lar + chr2L 19620592 intron Lar + chr2L 19621142 intron Lar + chr2L_6_19620001 chr2L_19620001 OSS_C 527 chr2L 19652498 19652555 chr2L 19674011 19674066 opus 9 21512 6.0 5.0 5.5 1.4 21568 chr2L 19652498 intron Lar + chr2L 19663282 intron Lar + chr2L 19674066 intron Lar + chr2L_9_19660001 chr2L_19660001 OSS_C 528 chr2L 19703484 19703547 chr2L 19712696 19712759 roo 11 9212 11.0 5.5 8.2 1.2 9275 chr2L 19703484 intron Lar + chr2L 19708122 intron Lar + chr2L 19712759 intron Lar + chr2L_11_19705001 chr2L_19705001 OSS_C 530 chr2L 19737317 19737370 chr2L 19740862 19740915 1360 6 3545 4.0 6.0 5.0 1.0 3598 chr2L 19737317 intergenic Nf-YB + chr2L 19739116 intergenic not near genes chr2L 19740915 intergenic not near genes chr2L_6_19735001 chr2L_19735001 OSS_C 531 chr2L 19762760 19762821 chr2L 19763077 19763139 pogo 7 318 5.5 3.5 4.5 1.3 379 chr2L 19762760 exon fbp - chr2L 19762950 intron fbp - chr2L 19763139 intron fbp - chr2L_7_19760001 chr2L_19760001 OSS_C 538 chr2L 20005810 20005854 chr2L 20010962 20011006 flea 9 5152 3.5 4.5 4.0 1.8 5196 chr2L 20005810 intron CG43861 - chr2L 20008408 intron CG43861 - chr2L 20011006 intron CG43861 - chr2L_9_20005001 chr2L_20005001 OSS_C 542 chr2L 20272056 20272129 chr2L 20282843 20282916 copia 13 10787 2.5 5.0 3.8 2.7 10860 chr2L 20272056 intergenic not near genes chr2L 20277486 intergenic not near genes chr2L 20282916 intergenic not near genes chr2L_13_20275001 chr2L_20275001 OSS_C 543 chr2L 20303102 20303175 chr2L 20310630 20310719 blood 4 7536 1.0 1.5 1.2 1.8 7617 chr2L 20303102 intergenic not near genes chr2L 20306910 intergenic not near genes chr2L 20310719 intergenic spir + chr2L_4_20305001 chr2L_20305001 OSS_C 546 chr2L 20372149 20372235 chr2L 20372474 20372551 pogo 19 322 1.5 4.5 3.0 4.8 402 chr2L 20372149 intergenic Ugt37a1 - chr2L 20372350 intergenic Ugt37a1 - chr2L 20372551 exon Ugt37a1 - chr2L_19_20370001 chr2L_20370001 OSS_C 550 chr2L 20568598 20568674 chr2L 20569063 20569140 X-element 12 466 3.0 5.5 4.2 2.3 542 chr2L 20568598 intron CR45347 + chr2L 20568869 intron CR45347 + chr2L 20569140 intron CR45347 + chr2L_12_20565001 chr2L_20565001 OSS_C 551 chr2L 20576154 20576236 chr2L 20583698 20583779 blood 8 7544 3.5 2.5 3.0 2.0 7625 chr2L 20576154 intergenic CR45347 + chr2L 20579966 intergenic not near genes chr2L 20583779 3` UTR CR44909 - chr2L_8_20575001 chr2L_20575001 OSS_C 555 chr2L 20639440 20639515 chr2L 20639792 20639867 INE-1 6 352 4.5 5.0 4.8 1.0 427 chr2L 20639440 intergenic not near genes chr2L 20639654 intergenic CG31680 + chr2L 20639867 intergenic CG31680 + chr2L_6_20635001 chr2L_20635001 OSS_C 561 chr2L 20891462 20891542 chr2L 20896639 20896719 jockey 8 5177 1.5 1.0 1.2 3.6 5257 chr2L 20891462 intron,intron CG43739 -,sky - chr2L 20894090 intron,intron CG43739 -,sky - chr2L 20896719 intron,intron CG43739 -,sky - chr2L_8_20890001 chr2L_20890001 OSS_C 566 chr2L 20976593 20976651 chr2L 20981484 20981542 X-element 9 4891 2.5 6.5 4.5 1.6 4949 chr2L 20976593 intron CG42238 - chr2L 20979068 intron CG42238 - chr2L 20981542 intron CG42238 - chr2L_9_20975001 chr2L_20975001 OSS_C 567 chr2L 21020217 21020288 chr2L 21023970 21024041 NOF 15 3753 2.5 6.5 4.5 2.7 3824 chr2L 21020217 intron CG42238 - chr2L 21022129 intron CG42238 - chr2L 21024041 intron CG42238 - chr2L_15_21020001 chr2L_21020001 OSS_C 569 chr2L 21041084 21041153 chr2L 21049421 21049488 Tirant 7 8336 5.5 7.0 6.2 1.0 8404 chr2L 21041084 intron CG42238 - chr2L 21045286 intron CG42238 - chr2L 21049488 intron CG42238 - chr2L_7_21045001 chr2L_21045001 OSS_C 577 chr2L 21347489 21347540 chr2L 21355036 21355088 blood 4 7548 3.5 1.0 2.2 1.2 7599 chr2L 21347489 intron Tsp39D + chr2L 21351288 intron Tsp39D + chr2L 21355088 intron Tsp39D + chr2L_4_21350001 chr2L_21350001 OSS_C 580 chr2L 21596978 21596987 chr2L 21604798 21604806 roo 5 7819 6.5 3.0 4.8 0.9 7828 chr2L 21596978 intergenic not near genes chr2L 21600892 intergenic not near genes chr2L 21604806 intergenic not near genes chr2L_5_21600001 chr2L_21600001 OSS_C 593 chr2L 21981624 21981694 chr2L 21990865 21990935 roo 14 9241 4.5 7.0 5.8 2.1 9311 chr2L 21981624 exon CG2528 - chr2L 21986280 intron CG2528 - chr2L 21990935 exon CG2528 - chr2L_14_21985001 chr2L_21985001 OSS_C 598 chr2L 22258541 22258632 chr2L 22260741 22260832 G6 11 2200 2.0 5.0 3.5 2.4 2291 chr2L 22258541 intergenic Tif-IA + chr2L 22259686 intergenic not near genes chr2L 22260832 intergenic not near genes chr2L_11_22255001 chr2L_22255001 OSS_C 600 chr2L 22341233 22341300 chr2L 22341504 22341570 G-element 7 271 20.0 11.5 15.8 0.4 337 chr2L 22341233 intron CG17018 + chr2L 22341402 intron CG17018 + chr2L 22341570 intron CG17018 + chr2L_7_22340001 chr2L_22340001 OSS_C 604 chr2L 22548859 22548923 chr2L 22550133 22550224 1360 5 1279 4.0 8.5 6.2 0.7 1365 chr2L 22548859 intergenic CG17490 + chr2L 22549542 intergenic not near genes chr2L 22550224 intergenic CG17493 + chr2L_5_22545001 chr2L_22545001 OSS_C 605 chr2L 22581923 22581994 chr2L 22583787 22583858 S-element 9 1865 2.0 3.5 2.8 2.4 1935 chr2L 22581923 intron CG17494 + chr2L 22582890 intron CG17494 + chr2L 22583858 intron CG17494 + chr2L_9_22580001 chr2L_22580001 OSS_C 606 chr2L 22679805 22679812 chr2L 22684652 22684659 F-element 5 4847 4.0 7.0 5.5 0.8 4854 chr2L 22679805 intron CG40006 - chr2L 22682232 intron CG40006 - chr2L 22684659 intron CG40006 - chr2L_5_22680001 chr2L_22680001 OSS_C 608 chr2L 22776367 22776438 chr2L 22778231 22778303 S-element 12 1864 3.0 2.0 2.5 3.4 1936 chr2L 22776367 intergenic not near genes chr2L 22777335 intergenic not near genes chr2L 22778303 intergenic not near genes chr2L_12_22775001 chr2L_22775001 OSS_C 610 chr2R 469910 469967 chr2R 473226 473283 F-element 5 3316 0.5 1.0 0.8 2.8 3373 chr2R 469910 intergenic not near genes chr2R 471596 intergenic not near genes chr2R 473283 intergenic not near genes chr2R_5_470001 chr2R_470001 OSS_C 611 chr2R 529315 529342 chr2R 538015 538042 Max-element 9 8700 4.5 8.0 6.2 1.2 8727 chr2R 529315 intron CG40378 + chr2R 533678 intron CG40378 + chr2R 538042 intron CG40378 + chr2R_9_530001 chr2R_530001 OSS_C 612 chr2R 1516544 1516593 chr2R 1521348 1521397 1731 21 4804 14.0 14.0 14.0 1.4 4853 chr2R 1516544 exon Maf1 - chr2R 1518970 intron Maf1 - chr2R 1521397 5` UTR Maf1 - chr2R_21_1515001 chr2R_1515001 OSS_C 614 chr2R 2110443 2110489 chr2R 2118077 2118122 17.6 11 7633 12.5 8.5 10.5 1.0 7679 chr2R 2110443 intron CG17684 - chr2R 2114282 intron CG17684 - chr2R 2118122 intron CG17684 - chr2R_11_2110001 chr2R_2110001 OSS_C 615 chr2R 2498927 2499001 chr2R 2508150 2508224 roo 7 9223 3.5 2.5 3.0 1.8 9297 chr2R 2498927 intron MFS17 - chr2R 2503576 intron MFS17 - chr2R 2508224 intron MFS17 - chr2R_7_2500001 chr2R_2500001 OSS_C 616 chr2R 3144039 3144105 chr2R 3393393 3393459 Doc 8 249354 11.5 19.5 15.5 0.5 249420 chr2R 3144039 intron CG42596 + chr2R 3268749 intergenic not near genes chr2R 3393459 intergenic not near genes chr2R_8_3265001 chr2R_3265001 OSS_C 618 chr2R 3532574 3532612 chr2R 3536093 3536130 Doc 5 3518 1.0 1.5 1.2 2.3 3556 chr2R 3532574 intergenic not near genes chr2R 3534352 intergenic not near genes chr2R 3536130 intergenic not near genes chr2R_5_3530001 chr2R_3530001 OSS_C 620 chr2R 4622897 4622970 chr2R 4624131 4624205 1360 11 1235 12.0 7.0 9.5 1.0 1308 chr2R 4622897 intergenic CR44101 - chr2R 4623551 intergenic not near genes chr2R 4624205 intergenic not near genes chr2R_11_4620001 chr2R_4620001 OSS_C 623 chr2R 4830084 4830118 chr2R 5636395 5636430 rooA 7 806312 14.5 22.0 18.2 0.4 806346 chr2R 4830084 3` UTR CG14464 + chr2R 5233257 intron Nipped-A - chr2R 5636430 intergenic not near genes chr2R_7_5230001 chr2R_5230001 OSS_C 624 chr2R 4838847 4838885 chr2R 4840445 4840484 transib2 6 1599 9.5 13.5 11.5 0.5 1637 chr2R 4838847 intergenic not near genes chr2R 4839666 intergenic not near genes chr2R 4840484 intergenic not near genes chr2R_6_4835001 chr2R_4835001 OSS_C 633 chr2R 5417933 5418014 chr2R 5420641 5420721 Burdock 13 2708 3.5 4.0 3.8 2.7 2788 chr2R 5417933 intron laccase2 + chr2R 5419327 intron laccase2 + chr2R 5420721 intron laccase2 + chr2R_13_5415001 chr2R_5415001 OSS_C 643 chr2R 5869217 5869288 chr2R 5874369 5874439 flea 12 5152 4.5 2.5 3.5 2.7 5222 chr2R 5869217 intergenic not near genes chr2R 5871828 intergenic not near genes chr2R 5874439 intergenic not near genes chr2R_12_5870001 chr2R_5870001 OSS_C 646 chr2R 5902138 5902170 chr2R 5909773 5909804 17.6 4 7635 5.5 5.5 5.5 0.6 7666 chr2R 5902138 intron CG43366 + chr2R 5905971 intron CG43366 + chr2R 5909804 intron CG43366 + chr2R_4_5905001 chr2R_5905001 OSS_C 648 chr2R 6096655 6096732 chr2R 6101929 6102005 BS 14 5274 6.0 10.0 8.0 1.6 5350 chr2R 6096655 intron EcR - chr2R 6099330 intron EcR - chr2R 6102005 intron EcR - chr2R_14_6095001 chr2R_6095001 OSS_C 652 chr2R 6494465 6494541 chr2R 6499303 6499379 F-element 6 4838 3.5 1.5 2.5 1.7 4914 chr2R 6494465 intergenic not near genes chr2R 6496922 intergenic not near genes chr2R 6499379 intergenic not near genes chr2R_6_6495001 chr2R_6495001 OSS_C 655 chr2R 6579758 6579800 chr2R 6584920 6584962 flea 6 5162 3.0 7.5 5.2 1.0 5204 chr2R 6579758 intron jing + chr2R 6582360 intron jing + chr2R 6584962 intron jing + chr2R_6_6580001 chr2R_6580001 OSS_C 660 chr2R 6952102 6952184 chr2R 6959759 6959840 opus 6 7656 2.5 4.0 3.2 1.4 7738 chr2R 6952102 intron,intron,exon mim -,CheB42c -,ppk25 + chr2R 6955971 intron,intron mim -,CheB42c - chr2R 6959840 intron,intron mim -,CheB42c - chr2R_6_6955001 chr2R_6955001 OSS_C 665 chr2R 7196508 7196572 chr2R 7201359 7201429 F-element 7 4853 4.5 1.0 2.8 1.8 4921 chr2R 7196508 intron pk + chr2R 7198968 intron pk + chr2R 7201429 intron pk + chr2R_7_7195001 chr2R_7195001 OSS_C 675 chr2R 7434845 7434902 chr2R 7439222 7439278 Juan 8 4377 11.5 6.5 9.0 0.8 4433 chr2R 7434845 3` UTR so + chr2R 7437062 intergenic not near genes chr2R 7439278 intergenic not near genes chr2R_8_7435001 chr2R_7435001 OSS_C 678 chr2R 7608356 7608441 chr2R 7613635 7613697 I-element 9 5276 1.5 6.0 3.8 1.9 5341 chr2R 7608356 intron CG1358 - chr2R 7611026 intron CG1358 - chr2R 7613697 intron CG1358 - chr2R_9_7610001 chr2R_7610001 OSS_C 683 chr2R 7815607 7815671 chr2R 7822151 7822215 Burdock 6 6544 1.0 3.5 2.2 1.9 6608 chr2R 7815607 intergenic CG1882 + chr2R 7818911 intergenic not near genes chr2R 7822215 3` UTR cathD - chr2R_6_7815001 chr2R_7815001 OSS_C 686 chr2R 7862214 7862246 chr2R 7867374 7867435 flea 6 5171 13.0 2.5 7.8 0.7 5221 chr2R 7862214 intron Dgk - chr2R 7864824 intron Dgk - chr2R 7867435 intron Dgk - chr2R_6_7860001 chr2R_7860001 OSS_C 687 chr2R 7869129 7869199 chr2R 7873990 7874060 Doc 10 4861 3.5 3.5 3.5 2.2 4931 chr2R 7869129 intron Dgk - chr2R 7871594 intron Dgk - chr2R 7874060 intron Dgk - chr2R_10_7870001 chr2R_7870001 OSS_C 695 chr2R 8160874 8160934 chr2R 8161040 8161100 1360 11 166 14.0 17.0 15.5 0.7 226 chr2R 8160874 exon CG8708 - chr2R 8160987 intron CG8708 - chr2R 8161100 intron CG8708 - chr2R_11_8160001 chr2R_8160001 OSS_C 697 chr2R 8330816 8330870 chr2R 8331378 8331431 roo 12 562 5.5 4.5 5.0 2.0 615 chr2R 8330816 intron pdm3 + chr2R 8331124 intron pdm3 + chr2R 8331431 intron pdm3 + chr2R_12_8330001 chr2R_8330001 OSS_C 698 chr2R 8398151 8398227 chr2R 8403007 8403084 Doc 23 4857 4.0 3.5 3.8 4.8 4933 chr2R 8398151 exon CG2121 - chr2R 8400618 intron CG2121 - chr2R 8403084 intron CG2121 - chr2R_23_8400001 chr2R_8400001 OSS_C 702 chr2R 8722719 8722788 chr2R 8723036 8723104 pogo 17 317 4.5 10.0 7.2 2.1 385 chr2R 8722719 intron CG14767 - chr2R 8722912 intron CG14767 - chr2R 8723104 intron CG14767 - chr2R_17_8720001 chr2R_8720001 OSS_C 706 chr2R 8777854 8777929 chr2R 8784134 8784208 diver 9 6280 2.0 1.5 1.8 3.2 6354 chr2R 8777854 intergenic not near genes chr2R 8781031 intergenic not near genes chr2R 8784208 intergenic not near genes chr2R_9_8780001 chr2R_8780001 OSS_C 719 chr2R 9151238 9151322 chr2R 9157784 9157868 Burdock 22 6546 10.5 2.5 6.5 2.9 6630 chr2R 9151238 intron CG30345 + chr2R 9154553 intergenic not near genes chr2R 9157868 intergenic CG8008 - chr2R_22_9150001 chr2R_9150001 OSS_C 720 chr2R 9212634 9212663 chr2R 9213195 9213225 roo 9 562 10.0 1.0 5.5 1.4 591 chr2R 9212634 intergenic CR45309 + chr2R 9212930 intergenic CR45309 + chr2R 9213225 5` UTR CR45309 + chr2R_9_9210001 chr2R_9210001 OSS_C 726 chr2R 9352162 9352169 chr2R 9361387 9361393 roo 4 9225 15.5 3.5 9.5 0.4 9231 chr2R 9352162 intron CG13954 - chr2R 9356778 intron CG13954 - chr2R 9361393 intron CG13954 - chr2R_4_9355001 chr2R_9355001 OSS_C 729 chr2R 9480017 9480043 chr2R 9490624 9490650 roo 10 10607 6.5 0.0 3.2 2.4 10633 chr2R 9480017 intergenic not near genes chr2R 9485334 intergenic not near genes chr2R 9490650 intergenic not near genes chr2R_10_9485001 chr2R_9485001 OSS_C 735 chr2R 9871029 9871060 chr2R 9871591 9871622 roo 10 562 1.0 17.5 9.2 1.0 593 chr2R 9871029 intron cbx - chr2R 9871326 intron cbx - chr2R 9871622 intron,5` UTR cbx -,CG18446 + chr2R_10_9870001 chr2R_9870001 OSS_C 736 chr2R 9945376 9945441 chr2R 9945648 9945713 BS 13 272 5.5 4.0 4.8 2.2 337 chr2R 9945376 intron Mef2 - chr2R 9945544 intron Mef2 - chr2R 9945713 intron Mef2 - chr2R_13_9945001 chr2R_9945001 OSS_C 738 chr2R 10005788 10005850 chr2R 10007029 10007091 1360 19 1241 4.5 5.5 5.0 3.2 1303 chr2R 10005788 intron Pka-R2 - chr2R 10006440 intron Pka-R2 - chr2R 10007091 intron Pka-R2 - chr2R_19_10005001 chr2R_10005001 OSS_C 747 chr2R 10176813 10176893 chr2R 10186058 10186135 roo 6 9244 3.0 1.0 2.0 2.0 9322 chr2R 10176813 intron KCNQ - chr2R 10181474 intron KCNQ - chr2R 10186135 intron KCNQ - chr2R_6_10180001 chr2R_10180001 OSS_C 759 chr2R 10585493 10585575 chr2R 10594152 10594234 Tirant 6 8658 6.0 5.0 5.5 0.9 8741 chr2R 10585493 intron psq + chr2R 10589864 intron psq + chr2R 10594234 intron psq + chr2R_6_10585001 chr2R_10585001 OSS_C 763 chr2R 10948013 10948052 chr2R 10955639 10955679 17.6 7 7627 0.5 14.0 7.2 0.9 7666 chr2R 10948013 intergenic not near genes chr2R 10951846 intergenic not near genes chr2R 10955679 intergenic not near genes chr2R_7_10950001 chr2R_10950001 OSS_C 766 chr2R 10979586 10979673 chr2R 10980133 10980219 297 6 545 4.0 2.0 3.0 1.5 633 chr2R 10979586 intergenic not near genes chr2R 10979902 intergenic not near genes chr2R 10980219 intergenic not near genes chr2R_6_10975001 chr2R_10975001 OSS_C 768 chr2R 11009755 11009836 chr2R 11019005 11019086 roo 10 9250 4.5 3.5 4.0 2.0 9331 chr2R 11009755 intron luna - chr2R 11014420 intron luna - chr2R 11019086 intron luna - chr2R_10_11010001 chr2R_11010001 OSS_C 777 chr2R 11207760 11207830 chr2R 11208029 11208099 BS 8 269 4.5 4.5 4.5 1.5 339 chr2R 11207760 intron shn + chr2R 11207930 intron shn + chr2R 11208099 intron shn + chr2R_8_11205001 chr2R_11205001 OSS_C 781 chr2R 11297577 11297594 chr2R 11301974 11301991 flea 6 4397 8.0 3.5 5.8 0.9 4414 chr2R 11297577 intergenic CG42336 - chr2R 11299784 intergenic not near genes chr2R 11301991 5` UTR CG7741 + chr2R_6_11295001 chr2R_11295001 OSS_C 784 chr2R 11415462 11415535 chr2R 11418687 11418760 opus 14 3225 2.5 8.5 5.5 2.2 3298 chr2R 11415462 intron,3` UTR Drip -,CG7763 + chr2R 11417111 intron Drip - chr2R 11418760 intron Drip - chr2R_14_11415001 chr2R_11415001 OSS_C 786 chr2R 11472579 11472669 chr2R 11473853 11473942 pogo 14 1273 6.0 4.0 5.0 2.3 1363 chr2R 11472579 intergenic not near genes chr2R 11473260 intergenic not near genes chr2R 11473942 intergenic not near genes chr2R_14_11470001 chr2R_11470001 OSS_C 808 chr2R 12501630 12501706 chr2R 12503867 12503943 Rt1c 12 2238 3.0 2.5 2.8 3.2 2313 chr2R 12501630 intron fdl - chr2R 12502786 intron fdl - chr2R 12503943 intron fdl - chr2R_12_12500001 chr2R_12500001 OSS_C 815 chr2R 12707448 12707528 chr2R 12715890 12715969 roo 9 8442 3.5 0.0 1.8 3.2 8521 chr2R 12707448 intron CG42663 + chr2R 12711708 intron CG42663 + chr2R 12715969 intron CG42663 + chr2R_9_12710001 chr2R_12710001 OSS_C 821 chr2R 12789235 12789311 chr2R 12797673 12797749 roo 17 8438 1.5 7.0 4.2 3.3 8514 chr2R 12789235 intron,3` UTR sca +,CR45137 - chr2R 12793492 intron,intron sca +,CR45137 - chr2R 12797749 intron,3` UTR sca +,CR45137 - chr2R_17_12790001 chr2R_12790001 OSS_C 822 chr2R 12819386 12819463 chr2R 12824530 12824603 jockey 12 5143 3.5 4.5 4.0 2.4 5217 chr2R 12819386 intergenic not near genes chr2R 12821994 intergenic not near genes chr2R 12824603 intergenic not near genes chr2R_12_12820001 chr2R_12820001 OSS_C 827 chr2R 13136773 13136848 chr2R 13141647 13141722 Doc 14 4874 7.0 5.0 6.0 2.0 4949 chr2R 13136773 exon Cap-G + chr2R 13139248 intron Cap-G + chr2R 13141722 intron Cap-G + chr2R_14_13135001 chr2R_13135001 OSS_C 836 chr2R 13580479 13580503 chr2R 13580905 13580929 jockey 7 426 3.0 12.5 7.8 0.8 450 chr2R 13580479 3` UTR CG6191 - chr2R 13580704 3` UTR,3` UTR CG6191 -,CG45088 - chr2R 13580929 3` UTR,3` UTR CG6191 -,CG45088 - chr2R_7_13580001 chr2R_13580001 OSS_C 844 chr2R 13728071 13728120 chr2R 13735804 13735853 opus 6 7734 3.0 2.5 2.8 1.6 7782 chr2R 13728071 intron fas + chr2R 13731962 intron fas + chr2R 13735853 intron fas + chr2R_6_13730001 chr2R_13730001 OSS_C 848 chr2R 13839512 13839544 chr2R 13839688 13839719 INE-1 4 176 8.5 6.0 7.2 0.5 207 chr2R 13839512 intergenic CG6347 + chr2R 13839616 intergenic CG6347 +,CG6357 + chr2R 13839719 intergenic CG6357 +,CG6347 + chr2R_4_13835001 chr2R_13835001 OSS_C 850 chr2R 13905544 13905619 chr2R 13907601 13907676 Rt1a 18 2058 5.5 4.0 4.8 3.1 2132 chr2R 13905544 intron shot - chr2R 13906610 intron shot - chr2R 13907676 intron shot - chr2R_18_13905001 chr2R_13905001 OSS_C 864 chr2R 14467229 14467316 chr2R 14476463 14476549 roo 26 9234 6.0 3.5 4.8 4.5 9320 chr2R 14467229 intergenic not near genes chr2R 14471889 intergenic not near genes chr2R 14476549 5` UTR CR44462 + chr2R_26_14470001 chr2R_14470001 OSS_C 865 chr2R 14497338 14497411 chr2R 14498591 14498663 1360 14 1251 4.5 6.0 5.2 2.3 1325 chr2R 14497338 intergenic Cpsf160 -,L + chr2R 14498000 intron Cpsf160 - chr2R 14498663 3` UTR Cpsf160 - chr2R_14_14495001 chr2R_14495001 OSS_C 882 chr2R 14889153 14889224 chr2R 14897837 14897900 Max-element 5 8679 3.5 0.5 2.0 1.7 8747 chr2R 14889153 intergenic Cyp6a8 - chr2R 14893526 intergenic not near genes chr2R 14897900 intergenic not near genes chr2R_5_14890001 chr2R_14890001 OSS_C 890 chr2R 15004667 15004716 chr2R 15005072 15005121 jockey 7 405 4.5 1.0 2.8 1.8 454 chr2R 15004667 intergenic not near genes chr2R 15004894 intergenic not near genes chr2R 15005121 intergenic not near genes chr2R_7_15000001 chr2R_15000001 OSS_C 891 chr2R 15015425 15015476 chr2R 15022925 15022976 mdg1 6 7499 2.0 7.5 4.8 1.0 7551 chr2R 15015425 intron hbs + chr2R 15019200 intron hbs + chr2R 15022976 intron hbs + chr2R_6_15015001 chr2R_15015001 OSS_C 894 chr2R 15084927 15084976 chr2R 15092051 15092101 297 14 7125 8.0 1.0 4.5 2.5 7174 chr2R 15084927 intergenic not near genes chr2R 15088514 intergenic not near genes chr2R 15092101 5` UTR CR44457 + chr2R_14_15085001 chr2R_15085001 OSS_C 895 chr2R 15119269 15119327 chr2R 15127826 15127881 Tirant 5 8556 3.0 8.0 5.5 0.8 8612 chr2R 15119269 intron chn + chr2R 15123575 intron chn + chr2R 15127881 intron chn + chr2R_5_15120001 chr2R_15120001 OSS_C 900 chr2R 15340639 15340662 chr2R 15349298 15349321 Tirant 6 8659 6.5 5.5 6.0 0.9 8682 chr2R 15340639 intron unc-5 + chr2R 15344980 intron unc-5 + chr2R 15349321 intron unc-5 + chr2R_6_15340001 chr2R_15340001 OSS_C 914 chr2R 16061656 16061713 chr2R 16064368 16064421 Burdock 7 2711 1.5 2.0 1.8 2.5 2765 chr2R 16061656 intergenic not near genes chr2R 16063038 intergenic not near genes chr2R 16064421 intergenic not near genes chr2R_7_16060001 chr2R_16060001 OSS_C 931 chr2R 17147193 17147255 chr2R 17152299 17152362 jockey 9 5107 0.5 6.5 3.5 2.0 5169 chr2R 17147193 intergenic not near genes chr2R 17149778 intergenic not near genes chr2R 17152362 intergenic not near genes chr2R_9_17145001 chr2R_17145001 OSS_C 934 chr2R 17236457 17236507 chr2R 17241737 17241787 copia 6 5280 7.0 7.0 7.0 0.8 5330 chr2R 17236457 intron mbl + chr2R 17239122 intron mbl + chr2R 17241787 intron mbl + chr2R_6_17235001 chr2R_17235001 OSS_C 938 chr2R 17485855 17485912 chr2R 17490693 17490749 F-element 8 4838 10.0 5.5 7.8 0.9 4894 chr2R 17485855 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17488302 intron NT5E-2 + chr2R 17490749 intron NT5E-2 + chr2R_8_17485001 chr2R_17485001 OSS_C 944 chr2R 17783963 17784045 chr2R 17784280 17784362 pogo 24 316 9.0 6.0 7.5 2.8 399 chr2R 17783963 intergenic mir-31a - chr2R 17784162 intergenic mir-31a - chr2R 17784362 intergenic mir-31a - chr2R_24_17780001 chr2R_17780001 OSS_C 950 chr2R 18045608 18045666 chr2R 18046035 18046094 jockey 5 428 3.5 1.5 2.5 1.4 486 chr2R 18045608 intergenic not near genes chr2R 18045851 intergenic not near genes chr2R 18046094 intergenic CG5767 - chr2R_5_18045001 chr2R_18045001 OSS_C 954 chr2R 18111658 18111692 chr2R 18115601 18115636 F-element 4 3944 5.0 3.0 4.0 0.8 3978 chr2R 18111658 intergenic not near genes chr2R 18113647 intergenic not near genes chr2R 18115636 intergenic not near genes chr2R_4_18110001 chr2R_18110001 OSS_C 958 chr2R 18358330 18358407 chr2R 18372618 18372694 roo 8 14288 4.5 1.5 3.0 2.0 14364 chr2R 18358330 intergenic not near genes chr2R 18365512 intergenic not near genes chr2R 18372694 intergenic not near genes chr2R_8_18365001 chr2R_18365001 OSS_C 963 chr2R 18487770 18487818 chr2R 18495297 18495344 blood 5 7527 3.5 2.5 3.0 1.2 7574 chr2R 18487770 intron CG30116 - chr2R 18491557 intron CG30116 - chr2R 18495344 intron CG30116 - chr2R_5_18490001 chr2R_18490001 OSS_C 968 chr2R 18575745 18575802 chr2R 18582009 18582066 3S18 5 6263 10.5 5.0 7.8 0.6 6321 chr2R 18575745 intron GEFmeso - chr2R 18578906 intron GEFmeso - chr2R 18582066 intron GEFmeso - chr2R_5_18575001 chr2R_18575001 OSS_C 969 chr2R 18590801 18590875 chr2R 18600029 18600103 roo 13 9228 4.0 4.5 4.2 2.5 9302 chr2R 18590801 intron GEFmeso - chr2R 18595452 intron GEFmeso - chr2R 18600103 intron GEFmeso - chr2R_13_18595001 chr2R_18595001 OSS_C 994 chr2R 19715797 19715855 chr2R 19723342 19723400 blood 17 7545 6.0 10.5 8.2 1.8 7603 chr2R 19715797 intergenic not near genes chr2R 19719598 intergenic not near genes chr2R 19723400 intergenic not near genes chr2R_17_19715001 chr2R_19715001 OSS_C 996 chr2R 19776546 19776604 chr2R 19779944 19780003 jockey 4 3399 4.0 4.0 4.0 0.8 3457 chr2R 19776546 intergenic not near genes chr2R 19778274 intergenic not near genes chr2R 19780003 intergenic not near genes chr2R_4_19775001 chr2R_19775001 OSS_C 1000 chr2R 19914794 19914864 chr2R 19922282 19922352 mdg1 9 7488 2.5 8.0 5.2 1.5 7558 chr2R 19914794 intergenic not near genes chr2R 19918573 intergenic not near genes chr2R 19922352 intergenic not near genes chr2R_9_19915001 chr2R_19915001 OSS_C 1003 chr2R 19957373 19957445 chr2R 19962650 19962722 copia 9 5277 3.0 4.0 3.5 2.0 5349 chr2R 19957373 intergenic CG44623 + chr2R 19960048 intergenic not near genes chr2R 19962722 intergenic not near genes chr2R_9_19960001 chr2R_19960001 OSS_C 1006 chr2R 20069209 20069263 chr2R 20071915 20071970 opus 6 2706 1.0 6.0 3.5 1.3 2761 chr2R 20069209 intergenic not near genes chr2R 20070590 intergenic not near genes chr2R 20071970 intergenic not near genes chr2R_6_20070001 chr2R_20070001 OSS_C 1011 chr2R 20368466 20368491 chr2R 20377704 20377730 roo 7 9238 3.0 7.5 5.2 1.1 9264 chr2R 20368466 intergenic not near genes chr2R 20373098 intergenic not near genes chr2R 20377730 intergenic not near genes chr2R_7_20370001 chr2R_20370001 OSS_C 1021 chr2R 20739383 20739467 chr2R 20744226 20744311 F-element 11 4844 4.0 6.5 5.2 1.8 4928 chr2R 20739383 intron dpr + chr2R 20741847 intron dpr + chr2R 20744311 intron dpr + chr2R_11_20740001 chr2R_20740001 OSS_C 1023 chr2R 20783242 20783312 chr2R 20788089 20788160 F-element 12 4848 5.0 2.5 3.8 2.5 4918 chr2R 20783242 intergenic not near genes chr2R 20785701 intergenic not near genes chr2R 20788160 intergenic CG43666 - chr2R_12_20785001 chr2R_20785001 OSS_C 1033 chr2R 21151081 21151146 chr2R 21153768 21153854 opus 5 2700 0.5 3.5 2.0 1.7 2773 chr2R 21151081 exon CG30389 - chr2R 21152468 intron CG30389 - chr2R 21153854 intron CG30389 - chr2R_5_21150001 chr2R_21150001 OSS_C 1048 chr2R 21809469 21809541 chr2R 21817785 21817856 roo 7 8315 7.0 8.0 7.5 0.8 8387 chr2R 21809469 intergenic not near genes chr2R 21813662 intergenic not near genes chr2R 21817856 intergenic not near genes chr2R_7_21810001 chr2R_21810001 OSS_C 1057 chr2R 22349630 22349698 chr2R 22351490 22351558 jockey 11 1860 11.0 5.0 8.0 1.2 1928 chr2R 22349630 intron Liprin-gamma - chr2R 22350594 intron Liprin-gamma - chr2R 22351558 intron Liprin-gamma - chr2R_11_22350001 chr2R_22350001 OSS_C 1061 chr2R 22465273 22465317 chr2R 22465542 22465585 BS 4 268 9.0 3.0 6.0 0.6 312 chr2R 22465273 intron CG10384 + chr2R 22465429 intron CG10384 + chr2R 22465585 intron CG10384 + chr2R_4_22465001 chr2R_22465001 OSS_C 1063 chr2R 22525684 22525768 chr2R 22529314 22529398 jockey 16 3630 4.0 6.0 5.0 2.7 3714 chr2R 22525684 intron px - chr2R 22527541 intron px - chr2R 22529398 intron px - chr2R_16_22525001 chr2R_22525001 OSS_C 1065 chr2R 22580366 22580437 chr2R 22586586 22586656 diver 9 6220 2.0 2.0 2.0 3.0 6290 chr2R 22580366 intron dnr1 - chr2R 22583511 intron dnr1 - chr2R 22586656 intron dnr1 - chr2R_9_22580001 chr2R_22580001 OSS_C 1070 chr2R 22774890 22774987 chr2R 22775385 22775482 jockey 12 495 1.0 5.0 3.0 3.0 592 chr2R 22774890 intron CG42260 - chr2R 22775186 intron CG42260 - chr2R 22775482 intron CG42260 - chr2R_12_22775001 chr2R_22775001 OSS_C 1089 chr2R 23402546 23402628 chr2R 23407698 23407780 flea 14 5151 1.0 6.5 3.8 2.9 5234 chr2R 23402546 intergenic CG3520 - chr2R 23405163 intergenic not near genes chr2R 23407780 intergenic not near genes chr2R_14_23405001 chr2R_23405001 OSS_C 1098 chr2R 23529514 23529594 chr2R 23537166 23537246 412 23 7652 5.0 6.0 5.5 3.5 7732 chr2R 23529514 exon bw - chr2R 23533380 intron bw - chr2R 23537246 exon bw - chr2R_23_23530001 chr2R_23530001 OSS_C 1108 chr2R 23914239 23914318 chr2R 23921939 23922018 412 27 7700 11.0 6.0 8.5 2.8 7779 chr2R 23914239 exon kcc + chr2R 23918128 intron kcc + chr2R 23922018 exon kcc + chr2R_27_23915001 chr2R_23915001 OSS_C 1113 chr2R 24147004 24147085 chr2R 24154658 24154739 412 15 7654 6.5 4.0 5.2 2.4 7735 chr2R 24147004 intron Dat + chr2R 24150872 intron Dat + chr2R 24154739 intron Dat + chr2R_15_24150001 chr2R_24150001 OSS_C 1114 chr2R 24177170 24177252 chr2R 24184731 24184813 412 12 7561 4.0 3.5 3.8 2.5 7643 chr2R 24177170 3` UTR Nop60B + chr2R 24180992 intron Nop60B + chr2R 24184813 intron Nop60B + chr2R_12_24180001 chr2R_24180001 OSS_C 1126 chr2R 24647547 24647599 chr2R 24655179 24655232 412 8 7633 3.5 2.5 3.0 2.0 7685 chr2R 24647547 intergenic not near genes chr2R 24651390 intergenic not near genes chr2R 24655232 intergenic not near genes chr2R_8_24650001 chr2R_24650001 OSS_C 1127 chr2R 24727828 24727890 chr2R 24735412 24735474 mdg1 6 7584 5.5 2.5 4.0 1.2 7646 chr2R 24727828 intron Mid1 - chr2R 24731651 intron Mid1 - chr2R 24735474 intron Mid1 - chr2R_6_24730001 chr2R_24730001 OSS_C 1128 chr2R 24763559 24763620 chr2R 24765610 24765671 G2 9 2052 2.0 3.5 2.8 2.4 2112 chr2R 24763559 exon CG3894 + chr2R 24764615 intron CG3894 + chr2R 24765671 exon CG3894 + chr2R_9_24760001 chr2R_24760001 OSS_C 1145 chr3L 402665 402693 chr3L 409794 409822 297 11 7129 6.5 8.5 7.5 1.3 7157 chr3L 402665 intergenic not near genes chr3L 406244 intergenic not near genes chr3L 409822 intergenic not near genes chr3L_11_405001 chr3L_405001 OSS_C 1157 chr3L 789853 789921 chr3L 790413 790481 roo 7 560 2.5 2.5 2.5 2.0 628 chr3L 789853 intergenic not near genes chr3L 790167 intergenic not near genes chr3L 790481 intergenic not near genes chr3L_7_790001 chr3L_790001 OSS_C 1160 chr3L 857934 858025 chr3L 866491 866581 Tirant 8 8557 5.0 7.5 6.2 1.1 8647 chr3L 857934 intergenic not near genes chr3L 862258 intergenic not near genes chr3L 866581 5` UTR CG12502 + chr3L_8_860001 chr3L_860001 OSS_C 1163 chr3L 925116 925194 chr3L 932616 932696 mdg1 7 7501 4.0 1.0 2.5 2.0 7580 chr3L 925116 intron Glut1 + chr3L 928906 intron Glut1 + chr3L 932696 intron Glut1 + chr3L_7_925001 chr3L_925001 OSS_C 1165 chr3L 939724 939780 chr3L 940921 940976 jockey 11 1197 5.5 2.0 3.8 2.3 1252 chr3L 939724 intron Glut1 + chr3L 940350 intron Glut1 + chr3L 940976 intron Glut1 + chr3L_11_940001 chr3L_940001 OSS_C 1171 chr3L 1047312 1047374 chr3L 1055201 1055262 412 4 7889 1.5 3.5 2.5 1.1 7950 chr3L 1047312 intron bab1 - chr3L 1051287 intron bab1 - chr3L 1055262 intron bab1 - chr3L_4_1050001 chr3L_1050001 OSS_C 1174 chr3L 1154061 1154154 chr3L 1163289 1163380 roo 16 9227 4.5 4.0 4.2 3.1 9319 chr3L 1154061 intron bab2 - chr3L 1158720 intron bab2 - chr3L 1163380 intron bab2 - chr3L_16_1155001 chr3L_1155001 OSS_C 1175 chr3L 1219528 1219607 chr3L 1227336 1227416 412 9 7808 8.5 6.5 7.5 1.1 7888 chr3L 1219528 intron mwh + chr3L 1223472 intron mwh + chr3L 1227416 intron mwh + chr3L_9_1220001 chr3L_1220001 OSS_C 1183 chr3L 1424757 1424771 chr3L 1430077 1430096 Rt1a 7 5323 0.0 14.5 7.2 0.9 5339 chr3L 1424757 intron Ptp61F - chr3L 1427426 intron Ptp61F - chr3L 1430096 intron Ptp61F - chr3L_7_1425001 chr3L_1425001 OSS_C 1184 chr3L 1485663 1485732 chr3L 1486910 1486979 1360 21 1244 9.0 11.0 10.0 1.9 1316 chr3L 1485663 intron stet - chr3L 1486321 intron stet - chr3L 1486979 intron stet - chr3L_21_1485001 chr3L_1485001 OSS_C 1186 chr3L 1505942 1506021 chr3L 1513614 1513694 17.6 21 7673 7.5 3.5 5.5 3.2 7752 chr3L 1505942 intron,intron Psa +,cue - chr3L 1509818 intron,intron Psa +,cue - chr3L 1513694 intron,intron Psa +,cue - chr3L_21_1505001 chr3L_1505001 OSS_C 1192 chr3L 1740790 1740856 chr3L 1741109 1741174 pogo 7 319 6.5 2.5 4.5 1.3 384 chr3L 1740790 intron Gk + chr3L 1740982 intron Gk + chr3L 1741174 intron Gk + chr3L_7_1740001 chr3L_1740001 OSS_C 1203 chr3L 2108219 2108255 chr3L 2113498 2113534 copia 5 5279 2.5 6.0 4.2 1.0 5315 chr3L 2108219 intron sls - chr3L 2110876 intron sls - chr3L 2113534 intron sls - chr3L_5_2110001 chr3L_2110001 OSS_C 1217 chr3L 2447448 2447525 chr3L 2456680 2456757 roo 18 9232 3.0 7.5 5.2 2.9 9309 chr3L 2447448 intron CG45186 + chr3L 2452102 intron CG45186 + chr3L 2456757 intron CG45186 + chr3L_18_2450001 chr3L_2450001 OSS_C 1227 chr3L 2751394 2751434 chr3L 2755764 2755804 F-element 5 4370 4.5 4.5 4.5 0.9 4410 chr3L 2751394 intron Mrtf - chr3L 2753599 intron Mrtf - chr3L 2755804 intron Mrtf - chr3L_5_2750001 chr3L_2750001 OSS_C 1234 chr3L 2927793 2927852 chr3L 2936146 2936204 Tirant 5 8353 3.5 4.5 4.0 1.0 8411 chr3L 2927793 intron Shab + chr3L 2931998 intron Shab + chr3L 2936204 intron Shab + chr3L_5_2930001 chr3L_2930001 OSS_C 1236 chr3L 3051678 3051733 chr3L 3051995 3052054 pogo 11 319 6.0 6.0 6.0 1.6 376 chr3L 3051678 3` UTR CG32485 + chr3L 3051866 intergenic CG32485 + chr3L 3052054 intergenic CG32485 +,CG1271 + chr3L_11_3050001 chr3L_3050001 OSS_C 1237 chr3L 3061226 3061291 chr3L 3069885 3069950 Tirant 9 8659 5.0 6.0 5.5 1.4 8724 chr3L 3061226 intron CG32486 - chr3L 3065588 intron CG32486 - chr3L 3069950 intron CG32486 - chr3L_9_3065001 chr3L_3065001 OSS_C 1240 chr3L 3281379 3281454 chr3L 3281951 3282025 Doc 22 572 7.0 10.5 8.8 2.2 646 chr3L 3281379 intron CG12017 + chr3L 3281702 intron CG12017 + chr3L 3282025 intron CG12017 + chr3L_22_3280001 chr3L_3280001 OSS_C 1247 chr3L 3475026 3475035 chr3L 3475545 3475555 jockey 4 520 8.0 6.5 7.2 0.5 529 chr3L 3475026 intron CG42324 + chr3L 3475290 intron CG42324 + chr3L 3475555 intron CG42324 + chr3L_4_3475001 chr3L_3475001 OSS_C 1253 chr3L 3601239 3601328 chr3L 3606626 3606715 copia 8 5387 2.0 2.0 2.0 2.7 5476 chr3L 3601239 intron Eip63E + chr3L 3603977 intron Eip63E + chr3L 3606715 intron Eip63E + chr3L_8_3600001 chr3L_3600001 OSS_C 1261 chr3L 3833678 3833758 chr3L 3833995 3834074 pogo 5 316 8.0 4.5 6.2 0.7 396 chr3L 3833678 intron enc + chr3L 3833876 intron enc + chr3L 3834074 intron enc + chr3L_5_3830001 chr3L_3830001 OSS_C 1279 chr3L 4773603 4773628 chr3L 4774402 4774425 Rt1a 4 798 9.5 20.0 14.8 0.3 822 chr3L 4773603 intron RhoGEF64C + chr3L 4774014 intron RhoGEF64C + chr3L 4774425 intron RhoGEF64C + chr3L_4_4770001 chr3L_4770001 OSS_C 1284 chr3L 4901066 4901139 chr3L 4907332 4907405 diver 7 6266 0.5 4.0 2.2 2.2 6339 chr3L 4901066 intergenic CG13704 + chr3L 4904236 intergenic not near genes chr3L 4907405 intergenic not near genes chr3L_7_4900001 chr3L_4900001 OSS_C 1287 chr3L 5034094 5034175 chr3L 5043321 5043402 roo 8 9225 4.5 3.5 4.0 1.6 9308 chr3L 5034094 intron Con - chr3L 5038748 intron Con - chr3L 5043402 intron Con - chr3L_8_5035001 chr3L_5035001 OSS_C 1288 chr3L 5045428 5045450 chr3L 5050285 5050307 Doc 5 4857 2.0 4.0 3.0 1.2 4879 chr3L 5045428 intron Con - chr3L 5047868 intron Con - chr3L 5050307 intron Con - chr3L_5_5045001 chr3L_5045001 OSS_C 1309 chr3L 5909982 5910045 chr3L 5910299 5910361 pogo 9 317 0.5 6.5 3.5 2.0 379 chr3L 5909982 intron CG13288 + chr3L 5910172 intron CG13288 + chr3L 5910361 intron CG13288 + chr3L_9_5910001 chr3L_5910001 OSS_C 1310 chr3L 5926267 5926333 chr3L 5926533 5926600 BS 7 266 2.5 6.0 4.2 1.3 333 chr3L 5926267 intron Vap-33B + chr3L 5926434 intron Vap-33B + chr3L 5926600 intron Vap-33B + chr3L_7_5925001 chr3L_5925001 OSS_C 1314 chr3L 6040296 6040376 chr3L 6042728 6042808 Doc 6 2432 3.0 1.5 2.2 1.9 2512 chr3L 6040296 intergenic Jon65Aiv + chr3L 6041552 intergenic not near genes chr3L 6042808 intergenic not near genes chr3L_6_6040001 chr3L_6040001 OSS_C 1321 chr3L 6220850 6220925 chr3L 6230078 6230152 roo 11 9227 3.5 3.0 3.2 2.6 9302 chr3L 6220850 5` UTR pncr008:3L + chr3L 6225501 intergenic not near genes chr3L 6230152 intergenic not near genes chr3L_11_6225001 chr3L_6225001 OSS_C 1322 chr3L 6334955 6335027 chr3L 6335502 6335574 297 9 547 3.5 3.0 3.2 2.1 619 chr3L 6334955 intron CG13300 - chr3L 6335264 intron CG13300 - chr3L 6335574 intron CG13300 - chr3L_9_6335001 chr3L_6335001 OSS_C 1327 chr3L 6620537 6620590 chr3L 6621053 6621106 Rt1c 14 516 5.5 10.5 8.0 1.6 569 chr3L 6620537 intergenic not near genes chr3L 6620822 intergenic not near genes chr3L 6621106 intergenic not near genes chr3L_14_6620001 chr3L_6620001 OSS_C 1330 chr3L 6781089 6781153 chr3L 6783175 6783238 Doc 4 2086 1.5 4.5 3.0 1.0 2149 chr3L 6781089 intergenic not near genes chr3L 6782164 intergenic not near genes chr3L 6783238 intergenic not near genes chr3L_4_6780001 chr3L_6780001 OSS_C 1332 chr3L 6855884 6855921 chr3L 6860744 6860781 Doc 7 4860 2.5 4.0 3.2 1.7 4897 chr3L 6855884 intergenic not near genes chr3L 6858332 intergenic not near genes chr3L 6860781 intergenic not near genes chr3L_7_6855001 chr3L_6855001 OSS_C 1335 chr3L 6887454 6887505 chr3L 6895022 6895073 roo 5 7568 4.5 3.0 3.8 1.0 7619 chr3L 6887454 intergenic not near genes chr3L 6891264 intergenic not near genes chr3L 6895073 intergenic not near genes chr3L_5_6890001 chr3L_6890001 OSS_C 1352 chr3L 7377252 7377348 chr3L 7380432 7380523 297 9 3179 1.5 4.5 3.0 2.2 3271 chr3L 7377252 intron SMSr - chr3L 7378888 intron SMSr - chr3L 7380523 intron SMSr - chr3L_9_7375001 chr3L_7375001 OSS_C 1354 chr3L 7498694 7498767 chr3L 7503546 7503619 F-element 5 4852 5.5 1.0 3.2 1.2 4925 chr3L 7498694 5` UTR CG8539 - chr3L 7501156 intergenic not near genes chr3L 7503619 intergenic not near genes chr3L_5_7500001 chr3L_7500001 OSS_C 1359 chr3L 7793665 7793712 chr3L 7800793 7800839 297 9 7128 4.5 8.0 6.2 1.2 7174 chr3L 7793665 intron CG32369 - chr3L 7797252 intron CG32369 - chr3L 7800839 intron CG32369 - chr3L_9_7795001 chr3L_7795001 OSS_C 1360 chr3L 7886446 7886528 chr3L 7889044 7889121 Stalker4 6 2594 1.5 2.5 2.0 2.0 2675 chr3L 7886446 intron CG32365 + chr3L 7887784 intron CG32365 + chr3L 7889121 intron CG32365 + chr3L_6_7885001 chr3L_7885001 OSS_C 1361 chr3L 7916770 7916828 chr3L 7926017 7926075 roo 6 9246 3.5 2.5 3.0 1.5 9305 chr3L 7916770 3` UTR syd - chr3L 7921422 intron syd - chr3L 7926075 3` UTR syd - chr3L_6_7920001 chr3L_7920001 OSS_C 1363 chr3L 7985320 7985369 chr3L 7987723 7987772 NOF 5 2403 2.0 5.0 3.5 1.1 2452 chr3L 7985320 intron nmo + chr3L 7986546 intron nmo + chr3L 7987772 intron nmo + chr3L_5_7985001 chr3L_7985001 OSS_C 1369 chr3L 8233521 8233571 chr3L 8238859 8238908 Rt1a 16 5336 4.0 9.0 6.5 2.1 5387 chr3L 8233521 intron CG7213 - chr3L 8236214 intron CG7213 - chr3L 8238908 intron,intron CG7213 -,Dscam4 + chr3L_16_8235001 chr3L_8235001 OSS_C 1375 chr3L 8481707 8481788 chr3L 8490942 8491023 roo 20 9235 9.5 8.0 8.8 2.0 9316 chr3L 8481707 intron CG43163 - chr3L 8486365 intron CG43163 - chr3L 8491023 intron CG43163 - chr3L_20_8485001 chr3L_8485001 OSS_C 1377 chr3L 8498235 8498308 chr3L 8505775 8505850 blood 6 7542 0.0 3.0 1.5 2.4 7615 chr3L 8498235 intron CG43163 - chr3L 8502042 intron CG43163 - chr3L 8505850 intron CG43163 - chr3L_6_8500001 chr3L_8500001 OSS_C 1389 chr3L 9076866 9076942 chr3L 9084502 9084578 412 22 7636 7.5 4.0 5.8 3.2 7712 chr3L 9076866 exon Tequila + chr3L 9080722 intron Tequila + chr3L 9084578 exon Tequila + chr3L_22_9080001 chr3L_9080001 OSS_C 1391 chr3L 9130492 9130578 chr3L 9134329 9134415 412 16 3837 4.0 3.0 3.5 3.6 3923 chr3L 9130492 intergenic bol - chr3L 9132454 intergenic not near genes chr3L 9134415 intergenic Dhpr + chr3L_16_9130001 chr3L_9130001 OSS_C 1392 chr3L 9219193 9219261 chr3L 9219941 9220008 jockey 16 748 7.5 6.5 7.0 2.0 815 chr3L 9219193 intergenic not near genes chr3L 9219600 intergenic not near genes chr3L 9220008 intergenic not near genes chr3L_16_9215001 chr3L_9215001 OSS_C 1396 chr3L 9270555 9270639 chr3L 9278386 9278467 roo 10 7831 2.0 7.5 4.8 1.7 7912 chr3L 9270555 intron GluRIB + chr3L 9274511 intron GluRIB + chr3L 9278467 exon GluRIB + chr3L_10_9270001 chr3L_9270001 OSS_C 1400 chr3L 9392397 9392503 chr3L 9395293 9395398 Doc 9 2897 2.0 5.0 3.5 2.0 3001 chr3L 9392397 intron CG4080 - chr3L 9393898 intron CG4080 - chr3L 9395398 intron CG4080 - chr3L_9_9390001 chr3L_9390001 OSS_C 1402 chr3L 9501637 9501732 chr3L 9502199 9502290 roo 9 559 2.5 3.0 2.8 2.4 653 chr3L 9501637 intron path - chr3L 9501964 intron path - chr3L 9502290 intron path - chr3L_9_9500001 chr3L_9500001 OSS_C 1405 chr3L 9526433 9526499 chr3L 9528189 9528255 Doc 5 1756 1.5 3.0 2.2 1.6 1822 chr3L 9526433 intergenic not near genes chr3L 9527344 intergenic not near genes chr3L 9528255 intergenic not near genes chr3L_5_9525001 chr3L_9525001 OSS_C 1407 chr3L 9533693 9533769 chr3L 9541328 9541405 412 19 7636 6.0 8.5 7.2 2.3 7712 chr3L 9533693 intergenic not near genes chr3L 9537549 intergenic not near genes chr3L 9541405 intergenic not near genes chr3L_19_9535001 chr3L_9535001 OSS_C 1408 chr3L 9571856 9571930 chr3L 9572279 9572380 jockey 11 426 4.0 3.0 3.5 2.4 524 chr3L 9571856 intron CG42673 + chr3L 9572118 intron CG42673 + chr3L 9572380 intron CG42673 + chr3L_11_9570001 chr3L_9570001 OSS_C 1409 chr3L 9575848 9575929 chr3L 9581004 9581085 jockey 10 5155 3.0 4.0 3.5 2.2 5237 chr3L 9575848 intron CG42673 + chr3L 9578466 intron CG42673 + chr3L 9581085 intron CG42673 + chr3L_10_9575001 chr3L_9575001 OSS_C 1417 chr3L 9929605 9929691 chr3L 9938459 9938547 roo 12 8855 1.5 3.0 2.2 3.8 8942 chr3L 9929605 intron CG34356 + chr3L 9934076 intron CG34356 + chr3L 9938547 intron CG34356 + chr3L_12_9930001 chr3L_9930001 OSS_C 1423 chr3L 10060078 10060117 chr3L 10067732 10067772 17.6 11 7655 7.5 2.5 5.0 1.8 7694 chr3L 10060078 intron dpr6 + chr3L 10063925 intron dpr6 + chr3L 10067772 intron dpr6 + chr3L_11_10060001 chr3L_10060001 OSS_C 1435 chr3L 10414893 10414957 chr3L 10417340 10417405 Doc 9 2448 3.5 7.5 5.5 1.4 2512 chr3L 10414893 intergenic CG12362 + chr3L 10416149 intergenic not near genes chr3L 10417405 intergenic not near genes chr3L_9_10415001 chr3L_10415001 OSS_C 1447 chr3L 11086965 11087075 chr3L 11088846 11088939 S-element 17 1871 1.5 2.5 2.0 5.7 1974 chr3L 11086965 intron JIL-1 - chr3L 11087952 intron JIL-1 - chr3L 11088939 intron JIL-1 - chr3L_17_11085001 chr3L_11085001 OSS_C 1454 chr3L 11264408 11264464 chr3L 11271436 11271491 17.6 18 7028 7.5 5.5 6.5 2.4 7083 chr3L 11264408 intergenic not near genes chr3L 11267950 intergenic not near genes chr3L 11271491 intergenic not near genes chr3L_18_11265001 chr3L_11265001 OSS_C 1455 chr3L 11329637 11329706 chr3L 11332917 11332986 jockey 12 3281 1.5 6.5 4.0 2.4 3349 chr3L 11329637 intergenic not near genes chr3L 11331312 intergenic not near genes chr3L 11332986 intergenic not near genes chr3L_12_11330001 chr3L_11330001 OSS_C 1462 chr3L 11564707 11564791 chr3L 11572408 11572491 412 10 7701 8.0 7.5 7.8 1.1 7784 chr3L 11564707 5` UTR CG33267 + chr3L 11568599 intron CG33267 + chr3L 11572491 exon CG33267 + chr3L_10_11565001 chr3L_11565001 OSS_C 1465 chr3L 11723050 11723099 chr3L 11727920 11727970 Doc 15 4871 1.5 3.5 2.5 4.3 4920 chr3L 11723050 3` UTR Bmcp + chr3L 11725510 intron Bmcp + chr3L 11727970 3` UTR Bmcp + chr3L_15_11725001 chr3L_11725001 OSS_C 1489 chr3L 12874880 12874937 chr3L 12877248 12877305 jockey 8 2368 3.5 1.0 2.2 2.5 2425 chr3L 12874880 intergenic not near genes chr3L 12876092 intergenic not near genes chr3L 12877305 intergenic not near genes chr3L_8_12875001 chr3L_12875001 OSS_C 1493 chr3L 12919209 12919290 chr3L 12924757 12924843 Rt1c 8 5550 6.0 4.5 5.2 1.3 5634 chr3L 12919209 intergenic not near genes chr3L 12922026 intergenic not near genes chr3L 12924843 intergenic not near genes chr3L_8_12920001 chr3L_12920001 OSS_C 1494 chr3L 12957727 12957771 chr3L 12962285 12962329 copia 4 4558 3.0 5.0 4.0 0.8 4602 chr3L 12957727 intergenic not near genes chr3L 12960028 intergenic not near genes chr3L 12962329 intergenic not near genes chr3L_4_12960001 chr3L_12960001 OSS_C 1504 chr3L 13525096 13525161 chr3L 13532968 13533033 roo 13 7872 1.5 4.0 2.8 3.4 7937 chr3L 13525096 intergenic not near genes chr3L 13529064 intergenic not near genes chr3L 13533033 intergenic not near genes chr3L_13_13525001 chr3L_13525001 OSS_C 1505 chr3L 13574562 13574617 chr3L 13580147 13580204 Rt1c 17 5586 10.0 6.0 8.0 1.9 5642 chr3L 13574562 intron bru-3 - chr3L 13577383 intron bru-3 - chr3L 13580204 intron bru-3 - chr3L_17_13575001 chr3L_13575001 OSS_C 1516 chr3L 13804488 13804557 chr3L 13822849 13822919 roo 16 18361 2.5 2.0 2.2 5.0 18431 chr3L 13804488 intergenic not near genes chr3L 13813704 intergenic not near genes chr3L 13822919 intergenic not near genes chr3L_16_13810001 chr3L_13810001 OSS_C 1527 chr3L 14245514 14245577 chr3L 14245684 14245746 1360 17 170 7.5 2.0 4.8 2.9 232 chr3L 14245514 3` UTR CR44561 - chr3L 14245630 3` UTR CR44561 - chr3L 14245746 intergenic CR44561 -,CR44560 + chr3L_17_14245001 chr3L_14245001 OSS_C 1530 chr3L 14295916 14295995 chr3L 14296477 14296556 roo 26 562 7.0 6.5 6.8 3.3 640 chr3L 14295916 intron fz + chr3L 14296236 intron fz + chr3L 14296556 intron fz + chr3L_26_14295001 chr3L_14295001 OSS_C 1531 chr3L 14311964 14312014 chr3L 14316854 14316904 X-element 8 4890 7.0 0.0 3.5 1.8 4940 chr3L 14311964 exon fz + chr3L 14314434 intron fz + chr3L 14316904 intron fz + chr3L_8_14310001 chr3L_14310001 OSS_C 1538 chr3L 14468405 14468461 chr3L 14473687 14473742 copia 6 5282 3.5 2.5 3.0 1.5 5337 chr3L 14468405 intron bbg - chr3L 14471074 intron bbg - chr3L 14473742 intron bbg - chr3L_6_14470001 chr3L_14470001 OSS_C 1546 chr3L 14721137 14721198 chr3L 14723056 14723116 Rt1c 14 1918 3.0 7.0 5.0 2.3 1979 chr3L 14721137 intron ome + chr3L 14722126 intron ome + chr3L 14723116 intron ome + chr3L_14_14720001 chr3L_14720001 OSS_C 1547 chr3L 14725585 14725609 chr3L 14728654 14728679 Doc 4 3070 0.5 6.0 3.2 1.0 3094 chr3L 14725585 intron ome + chr3L 14727132 intron ome + chr3L 14728679 intron ome + chr3L_4_14725001 chr3L_14725001 OSS_C 1551 chr3L 14954322 14954369 chr3L 14956066 14956113 transib2 4 1744 5.0 9.5 7.2 0.5 1791 chr3L 14954322 intergenic not near genes chr3L 14955218 intergenic not near genes chr3L 14956113 intergenic not near genes chr3L_4_14955001 chr3L_14955001 OSS_C 1554 chr3L 15085004 15085066 chr3L 15086245 15086308 1360 10 1242 3.5 6.0 4.8 1.7 1304 chr3L 15085004 intron cp309 - chr3L 15085656 intron cp309 - chr3L 15086308 intron cp309 - chr3L_10_15085001 chr3L_15085001 OSS_C 1562 chr3L 15295701 15295773 chr3L 15298619 15298691 gypsy5 8 2918 6.5 2.5 4.5 1.5 2990 chr3L 15295701 intergenic not near genes chr3L 15297196 intergenic not near genes chr3L 15298691 intergenic Best4 + chr3L_8_15295001 chr3L_15295001 OSS_C 1564 chr3L 15423741 15423769 chr3L 15426661 15426688 opus 5 2920 6.0 3.5 4.8 0.9 2947 chr3L 15423741 intergenic not near genes chr3L 15425214 intergenic not near genes chr3L 15426688 intergenic not near genes chr3L_5_15425001 chr3L_15425001 OSS_C 1576 chr3L 15899172 15899242 chr3L 15899815 15899885 jockey 17 643 7.5 1.5 4.5 3.1 713 chr3L 15899172 intergenic pHCl - chr3L 15899528 intergenic pHCl - chr3L 15899885 intergenic sff - chr3L_17_15895001 chr3L_15895001 OSS_C 1590 chr3L 16443798 16443865 chr3L 16446213 16446281 Doc 10 2416 1.0 10.0 5.5 1.5 2483 chr3L 16443798 intron,intron CG33158 +,dsx-c73A - chr3L 16445040 intron,intron CG33158 +,dsx-c73A - chr3L 16446281 intron,intron CG33158 +,dsx-c73A - chr3L_10_16445001 chr3L_16445001 OSS_C 1593 chr3L 16493913 16493994 chr3L 16494506 16494586 jockey 16 592 5.0 5.0 5.0 2.7 673 chr3L 16493913 intron,exon,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494250 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494586 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_16_16490001 chr3L_16490001 OSS_C 1602 chr3L 16616445 16616533 chr3L 16621849 16621937 297 9 5404 2.5 0.5 1.5 3.6 5492 chr3L 16616445 3` UTR Abl - chr3L 16619191 3` UTR Abl - chr3L 16621937 3` UTR Abl - chr3L_9_16615001 chr3L_16615001 OSS_C 1614 chr3L 16945668 16945735 chr3L 16954897 16954964 roo 17 9229 9.5 5.0 7.2 2.1 9296 chr3L 16945668 exon Obp73a + chr3L 16950316 intergenic not near genes chr3L 16954964 5` UTR Nc73EF + chr3L_17_16950001 chr3L_16950001 OSS_C 1617 chr3L 17034872 17034940 chr3L 17035130 17035204 G2 4 261 0.5 4.5 2.5 1.1 332 chr3L 17034872 intergenic not near genes chr3L 17035038 intergenic not near genes chr3L 17035204 intergenic beg + chr3L_4_17035001 chr3L_17035001 OSS_C 1618 chr3L 17084940 17085033 chr3L 17094165 17094258 roo 11 9225 3.0 4.0 3.5 2.4 9318 chr3L 17084940 intron Rbp6 - chr3L 17089599 intron Rbp6 - chr3L 17094258 intron Rbp6 - chr3L_11_17085001 chr3L_17085001 OSS_C 1628 chr3L 17516915 17516991 chr3L 17524549 17524625 412 11 7634 1.5 6.0 3.8 2.3 7710 chr3L 17516915 intron CG7564 + chr3L 17520770 intron CG7564 + chr3L 17524625 3` UTR CG7564 + chr3L_11_17520001 chr3L_17520001 OSS_C 1631 chr3L 17730791 17730854 chr3L 17738196 17738259 mdg1 9 7406 3.0 4.5 3.8 1.9 7468 chr3L 17730791 intron Ccn + chr3L 17734525 intron Ccn + chr3L 17738259 intron Ccn + chr3L_9_17730001 chr3L_17730001 OSS_C 1635 chr3L 17799755 17799824 chr3L 17801617 17801686 S-element 6 1863 1.0 1.0 1.0 3.0 1931 chr3L 17799755 intron NUCB1 - chr3L 17800720 intron NUCB1 - chr3L 17801686 intron NUCB1 - chr3L_6_17800001 chr3L_17800001 OSS_C 1640 chr3L 18047683 18047733 chr3L 18056816 18056865 roo 4 9132 0.5 7.5 4.0 0.8 9182 chr3L 18047683 intron Eip75B - chr3L 18052274 intron Eip75B - chr3L 18056865 intron Eip75B - chr3L_4_18050001 chr3L_18050001 OSS_C 1660 chr3L 18528581 18528628 chr3L 18537818 18537865 roo 6 9236 3.5 4.0 3.8 1.2 9284 chr3L 18528581 intergenic not near genes chr3L 18533223 intergenic not near genes chr3L 18537865 intergenic not near genes chr3L_6_18530001 chr3L_18530001 OSS_C 1663 chr3L 18593883 18593981 chr3L 18595939 18596040 Doc 10 2056 4.0 0.0 2.0 3.3 2157 chr3L 18593883 intergenic term - chr3L 18594962 intergenic not near genes chr3L 18596040 intergenic CR45389 + chr3L_10_18590001 chr3L_18590001 OSS_C 1667 chr3L 18710719 18710775 chr3L 18718747 18718802 Stalker2 10 8027 2.5 5.5 4.0 2.0 8083 chr3L 18710719 intergenic not near genes chr3L 18714760 intergenic not near genes chr3L 18718802 intergenic not near genes chr3L_10_18710001 chr3L_18710001 OSS_C 1670 chr3L 18772342 18772424 chr3L 18781099 18781181 roo 7 8757 4.0 3.0 3.5 1.6 8839 chr3L 18772342 intron ftz-f1 - chr3L 18776762 intron ftz-f1 - chr3L 18781181 intron ftz-f1 - chr3L_7_18775001 chr3L_18775001 OSS_C 1678 chr3L 19008781 19008848 chr3L 19009195 19009262 jockey 11 413 4.5 4.5 4.5 2.0 481 chr3L 19008781 intron nkd - chr3L 19009022 intron nkd - chr3L 19009262 intron nkd - chr3L_11_19005001 chr3L_19005001 OSS_C 1681 chr3L 19115573 19115655 chr3L 19115826 19115911 BS 5 255 1.0 5.0 3.0 1.2 338 chr3L 19115573 intron CG14082 - chr3L 19115742 intron CG14082 - chr3L 19115911 intron CG14082 - chr3L_5_19115001 chr3L_19115001 OSS_C 1682 chr3L 19116989 19117055 chr3L 19124512 19124577 mdg1 15 7523 4.5 3.5 4.0 3.0 7588 chr3L 19116989 intron CG14082 - chr3L 19120783 intron CG14082 - chr3L 19124577 intron CG14082 - chr3L_15_19120001 chr3L_19120001 OSS_C 1684 chr3L 19207995 19208083 chr3L 19209445 19209532 Doc 17 1450 5.5 0.5 3.0 4.2 1537 chr3L 19207995 intron fz2 - chr3L 19208764 intron fz2 - chr3L 19209532 intron fz2 - chr3L_17_19205001 chr3L_19205001 OSS_C 1693 chr3L 19398863 19398929 chr3L 19403655 19403722 F-element 12 4793 2.0 3.0 2.5 3.4 4859 chr3L 19398863 intron CG32206 - chr3L 19401292 intron CG32206 - chr3L 19403722 intron CG32206 - chr3L_12_19400001 chr3L_19400001 OSS_C 1705 chr3L 19820239 19820316 chr3L 19827864 19827941 412 8 7624 4.0 3.5 3.8 1.7 7702 chr3L 19820239 intron Deaf1 + chr3L 19824090 intron Deaf1 + chr3L 19827941 intron Deaf1 + chr3L_8_19820001 chr3L_19820001 OSS_C 1707 chr3L 19848449 19848517 chr3L 19857715 19857783 roo 13 9266 1.0 4.5 2.8 3.4 9334 chr3L 19848449 intron Papss + chr3L 19853116 intron Papss + chr3L 19857783 intron Papss + chr3L_13_19850001 chr3L_19850001 OSS_C 1715 chr3L 20113604 20113672 chr3L 20122937 20123004 roo 10 9333 2.5 1.0 1.8 3.6 9400 chr3L 20113604 intergenic not near genes chr3L 20118304 intergenic not near genes chr3L 20123004 intergenic not near genes chr3L_10_20115001 chr3L_20115001 OSS_C 1718 chr3L 20257267 20257335 chr3L 20258462 20258531 pogo 8 1196 5.0 10.0 7.5 0.9 1264 chr3L 20257267 intron rdgC + chr3L 20257899 intron rdgC + chr3L 20258531 intron rdgC + chr3L_8_20255001 chr3L_20255001 OSS_C 1720 chr3L 20321019 20321050 chr3L 20342844 20342876 17.6 4 21826 6.0 24.0 15.0 0.2 21857 chr3L 20321019 5` UTR Spn77Bb + chr3L 20331948 intergenic not near genes chr3L 20342876 exon Spn77Bc + chr3L_4_20330001 chr3L_20330001 OSS_C 1721 chr3L 20308323 20308400 chr3L 20359339 20359415 17.6 12 51016 32.5 26.0 29.2 0.4 51092 chr3L 20308323 exon CG6597 + chr3L 20333869 intergenic not near genes chr3L 20359415 exon CG5665 + chr3L_12_20330001 chr3L_20330001 OSS_C 1724 chr3L 20476697 20476766 chr3L 20484372 20484440 springer 7 7675 3.0 4.5 3.8 1.5 7743 chr3L 20476697 3` UTR isoQC + chr3L 20480568 intergenic not near genes chr3L 20484440 3` UTR ZnT77C - chr3L_7_20480001 chr3L_20480001 OSS_C 1725 chr3L 20590019 20590073 chr3L 20590634 20590688 412 8 615 19.0 9.5 14.2 0.5 669 chr3L 20590019 intergenic not near genes chr3L 20590354 intergenic not near genes chr3L 20590688 intergenic not near genes chr3L_8_20590001 chr3L_20590001 OSS_C 1727 chr3L 20821226 20821300 chr3L 20824912 20824987 NOF 7 3686 4.5 8.5 6.5 0.9 3761 chr3L 20821226 intron Pka-R1 + chr3L 20823106 intron Pka-R1 + chr3L 20824987 intron Pka-R1 + chr3L_7_20820001 chr3L_20820001 OSS_C 1735 chr3L 21014856 21014936 chr3L 21023413 21023493 Tirant 20 8556 1.5 4.0 2.8 5.3 8637 chr3L 21014856 intron skd - chr3L 21019174 intron skd - chr3L 21023493 intron skd - chr3L_20_21015001 chr3L_21015001 OSS_C 1737 chr3L 21151799 21151854 chr3L 21156959 21157014 flea 15 5159 3.5 2.0 2.8 3.9 5215 chr3L 21151799 intron Ac78C - chr3L 21154406 intron Ac78C - chr3L 21157014 intron Ac78C - chr3L_15_21150001 chr3L_21150001 OSS_C 1741 chr3L 21306084 21306148 chr3L 21315319 21315382 roo 14 9234 6.5 4.5 5.5 2.2 9298 chr3L 21306084 3` UTR CG7632 + chr3L 21310733 intron Pc - chr3L 21315382 3` UTR Pc - chr3L_14_21310001 chr3L_21310001 OSS_C 1752 chr3L 22099638 22099659 chr3L 22105899 22105921 3S18 4 6262 14.0 10.5 12.2 0.3 6283 chr3L 22099638 intergenic not near genes chr3L 22102780 intergenic not near genes chr3L 22105921 intergenic not near genes chr3L_4_22100001 chr3L_22100001 OSS_C 1757 chr3L 22555709 22555787 chr3L 22563255 22563333 blood 9 7546 16.5 14.0 15.2 0.6 7624 chr3L 22555709 intergenic not near genes chr3L 22559521 intergenic not near genes chr3L 22563333 intergenic not near genes chr3L_9_22555001 chr3L_22555001 OSS_C 1760 chr3L 22577560 22577635 chr3L 22582423 22582498 Doc 22 4864 5.0 5.0 5.0 3.7 4938 chr3L 22577560 intergenic not near genes chr3L 22580029 intergenic not near genes chr3L 22582498 3` UTR CG14459 - chr3L_22_22580001 chr3L_22580001 OSS_C 1761 chr3L 22617123 22617204 chr3L 22624651 22624732 blood 14 7528 16.0 17.5 16.8 0.8 7609 chr3L 22617123 intron CG14459 - chr3L 22620928 intron CG14459 - chr3L 22624732 intron CG14459 - chr3L_14_22620001 chr3L_22620001 OSS_C 1762 chr3L 22761326 22761397 chr3L 22766836 22766907 Ivk 5 5510 12.0 4.5 8.2 0.5 5581 chr3L 22761326 intron SPoCk + chr3L 22764116 intron SPoCk + chr3L 22766907 intron SPoCk + chr3L_5_22760001 chr3L_22760001 OSS_C 1765 chr3L 22865941 22865995 chr3L 22867150 22867204 Doc 6 1209 4.0 5.5 4.8 1.0 1263 chr3L 22865941 exon CG33170 + chr3L 22866572 intron CG33170 + chr3L 22867204 intron CG33170 + chr3L_6_22865001 chr3L_22865001 OSS_C 1767 chr3L 22989801 22989873 chr3L 22996850 22996923 297 13 7049 8.5 3.0 5.8 1.9 7122 chr3L 22989801 intergenic not near genes chr3L 22993362 intergenic not near genes chr3L 22996923 intergenic not near genes chr3L_13_22990001 chr3L_22990001 OSS_C 1768 chr3L 23848760 23848836 chr3L 23849668 23849736 R1A1-element 4 906 15.5 13.0 14.2 0.3 976 chr3L 23848760 intron CG40470 - chr3L 23849248 intron CG40470 - chr3L 23849736 intron CG40470 - chr3L_4_23845001 chr3L_23845001 OSS_C 1769 chr3L 24168726 24168804 chr3L 24176129 24176207 ZAM 24 7404 35.5 54.0 44.8 0.5 7481 chr3L 24168726 intron Snap25 + chr3L 24172466 intron Snap25 + chr3L 24176207 intron Snap25 + chr3L_24_24170001 chr3L_24170001 OSS_C 1770 chr3L 24791827 24791860 chr3L 24796682 24796715 Doc 5 4855 4.0 1.0 2.5 1.4 4888 chr3L 24791827 intergenic not near genes chr3L 24794271 intergenic not near genes chr3L 24796715 intergenic not near genes chr3L_5_24790001 chr3L_24790001 OSS_C 1774 chr3R 1867036 1867070 chr3R 1954893 1954927 Doc3-element 6 87857 19.0 22.0 20.5 0.3 87891 chr3R 1867036 intron CG42623 + chr3R 1910982 intron CG42623 + chr3R 1954927 intergenic not near genes chr3R_6_1910001 chr3R_1910001 OSS_C 1775 chr3R 1511854 1511860 chr3R 2516698 2516704 297 4 1004844 10.5 11.5 11.0 0.3 1004850 chr3R 1511854 intergenic not near genes chr3R 2014279 intergenic not near genes chr3R 2516704 intergenic not near genes chr3R_4_2010001 chr3R_2010001 OSS_C 1780 chr3R 4887412 4887481 chr3R 4894865 4894933 rover 11 7453 8.5 8.5 8.5 1.2 7521 chr3R 4887412 intergenic not near genes chr3R 4891172 intergenic not near genes chr3R 4894933 intergenic not near genes chr3R_11_4890001 chr3R_4890001 OSS_C 1784 chr3R 5045783 5045856 chr3R 5052961 5053034 HMS-Beagle 13 7178 5.5 0.5 3.0 3.2 7251 chr3R 5045783 3` UTR CR43635 - chr3R 5049408 intergenic not near genes chr3R 5053034 intergenic CR45588 - chr3R_13_5045001 chr3R_5045001 OSS_C 1793 chr3R 5927518 5927571 chr3R 5927833 5927887 pogo 5 316 15.0 3.5 9.2 0.5 369 chr3R 5927518 intron CG34113 - chr3R 5927702 intron CG34113 - chr3R 5927887 intron CG34113 - chr3R_5_5925001 chr3R_5925001 OSS_C 1798 chr3R 6015903 6015982 chr3R 6024459 6024539 Tirant 10 8556 4.5 3.5 4.0 2.0 8636 chr3R 6015903 intergenic not near genes chr3R 6020221 intergenic not near genes chr3R 6024539 intergenic not near genes chr3R_10_6020001 chr3R_6020001 OSS_C 1800 chr3R 6121109 6121151 chr3R 6121370 6121411 BS 4 260 0.5 0.5 0.5 2.7 302 chr3R 6121109 intergenic not near genes chr3R 6121260 intergenic not near genes chr3R 6121411 intergenic not near genes chr3R_4_6120001 chr3R_6120001 OSS_C 1801 chr3R 6158451 6158530 chr3R 6167109 6167186 Tirant 18 8658 3.5 7.0 5.2 2.9 8735 chr3R 6158451 intergenic not near genes chr3R 6162818 intergenic not near genes chr3R 6167186 intergenic CG1077 + chr3R_18_6160001 chr3R_6160001 OSS_C 1802 chr3R 6175118 6175176 chr3R 6182466 6182524 HMS-Beagle2 6 7348 3.0 2.5 2.8 1.6 7406 chr3R 6175118 intergenic Osi1 + chr3R 6178821 intron CR45194 + chr3R 6182524 intergenic CR45194 + chr3R_6_6175001 chr3R_6175001 OSS_C 1804 chr3R 6206237 6206298 chr3R 6206530 6206591 BS 15 293 6.5 2.5 4.5 2.7 354 chr3R 6206237 exon Osi24 + chr3R 6206414 intron Osi24 + chr3R 6206591 intron Osi24 + chr3R_15_6205001 chr3R_6205001 OSS_C 1819 chr3R 7694525 7694601 chr3R 7713661 7713738 invader3 8 19137 1.0 5.0 3.0 2.0 19213 chr3R 7694525 3` UTR Nlg1 + chr3R 7704132 intergenic not near genes chr3R 7713738 intergenic not near genes chr3R_8_7700001 chr3R_7700001 OSS_C 1820 chr3R 7729403 7729479 chr3R 7737417 7737493 Stalker2 9 8014 3.0 1.5 2.2 2.8 8090 chr3R 7729403 intergenic not near genes chr3R 7733448 intergenic not near genes chr3R 7737493 intergenic not near genes chr3R_9_7730001 chr3R_7730001 OSS_C 1824 chr3R 8090499 8090552 chr3R 8094051 8094105 297 7 3553 3.5 3.0 3.2 1.7 3606 chr3R 8090499 intergenic CR44330 + chr3R 8092302 intergenic not near genes chr3R 8094105 intergenic CG7900 + chr3R_7_8090001 chr3R_8090001 OSS_C 1825 chr3R 8094361 8094413 chr3R 8099742 8099793 Transpac 5 5380 5.0 3.5 4.2 1.0 5432 chr3R 8094361 intron CG7900 + chr3R 8097077 intron CG7900 + chr3R 8099793 intron CG7900 + chr3R_5_8095001 chr3R_8095001 OSS_C 1826 chr3R 8101694 8101725 chr3R 8104853 8104884 G2 4 3160 9.5 8.5 9.0 0.4 3190 chr3R 8101694 exon CG7900 + chr3R 8103289 intron CG7900 + chr3R 8104884 3` UTR CG7900 + chr3R_4_8100001 chr3R_8100001 OSS_C 1827 chr3R 8207509 8207567 chr3R 8208429 8208488 F-element 10 920 2.5 5.5 4.0 2.0 979 chr3R 8207509 intergenic not near genes chr3R 8207998 intergenic not near genes chr3R 8208488 intergenic not near genes chr3R_10_8205001 chr3R_8205001 OSS_C 1833 chr3R 8570418 8570508 chr3R 8575130 8575216 HMS-Beagle 7 4710 2.5 2.5 2.5 2.0 4798 chr3R 8570418 intergenic not near genes chr3R 8572817 intergenic not near genes chr3R 8575216 intergenic not near genes chr3R_7_8570001 chr3R_8570001 OSS_C 1834 chr3R 8601712 8601782 chr3R 8610941 8611010 roo 8 9228 2.5 1.5 2.0 2.7 9298 chr3R 8601712 intron 5-HT2B + chr3R 8606361 intron 5-HT2B + chr3R 8611010 intron 5-HT2B + chr3R_8_8605001 chr3R_8605001 OSS_C 1836 chr3R 8707312 8707329 chr3R 8709829 8709844 jockey 4 2516 8.5 6.5 7.5 0.5 2532 chr3R 8707312 intergenic not near genes chr3R 8708578 intergenic not near genes chr3R 8709844 intergenic not near genes chr3R_4_8705001 chr3R_8705001 OSS_C 1842 chr3R 8898171 8898212 chr3R 8913825 8913868 297 8 15656 3.5 7.0 5.2 1.3 15697 chr3R 8898171 intron pyd - chr3R 8906020 intron pyd - chr3R 8913868 intron pyd - chr3R_8_8905001 chr3R_8905001 OSS_C 1849 chr3R 9319515 9319591 chr3R 9320025 9320102 jockey 10 511 6.0 2.5 4.2 1.9 587 chr3R 9319515 intron CG8861 - chr3R 9319808 intron CG8861 - chr3R 9320102 intron CG8861 - chr3R_10_9315001 chr3R_9315001 OSS_C 1861 chr3R 10196901 10196926 chr3R 10202964 10202988 297 6 6062 15.5 6.5 11.0 0.5 6087 chr3R 10196901 exon Syn + chr3R 10199944 intron Syn + chr3R 10202988 intron Syn + chr3R_6_10195001 chr3R_10195001 OSS_C 1862 chr3R 10231714 10231802 chr3R 10237392 10237454 mdg3 9 5666 5.0 11.0 8.0 1.0 5740 chr3R 10231714 intron CG42795 + chr3R 10234584 intron CG42795 + chr3R 10237454 intron CG42795 + chr3R_9_10230001 chr3R_10230001 OSS_C 1863 chr3R 10255319 10255366 chr3R 10260835 10260882 I-element 4 5516 4.0 4.5 4.2 0.8 5563 chr3R 10255319 intergenic Sirt6 -,CG3999 + chr3R 10258100 intron Sirt6 - chr3R 10260882 exon Sirt6 - chr3R_4_10255001 chr3R_10255001 OSS_C 1869 chr3R 10957826 10957884 chr3R 10963279 10963337 Rt1c 7 5453 11.0 6.5 8.8 0.7 5511 chr3R 10957826 intergenic not near genes chr3R 10960582 intergenic not near genes chr3R 10963337 intergenic not near genes chr3R_7_10960001 chr3R_10960001 OSS_C 1883 chr3R 11841003 11841067 chr3R 11846269 11846334 BS 9 5267 7.0 1.0 4.0 1.8 5331 chr3R 11841003 intron CG6959 - chr3R 11843668 intron CG6959 - chr3R 11846334 intron CG6959 - chr3R_9_11840001 chr3R_11840001 OSS_C 1885 chr3R 12022820 12022900 chr3R 12025073 12025153 pogo 9 2253 1.5 2.0 1.8 3.2 2333 chr3R 12022820 intergenic not near genes chr3R 12023986 intergenic not near genes chr3R 12025153 intergenic not near genes chr3R_9_12020001 chr3R_12020001 OSS_C 1903 chr3R 12920096 12920168 chr3R 12925375 12925447 copia 6 5279 2.5 3.0 2.8 1.6 5351 chr3R 12920096 intron beat-Vb + chr3R 12922772 intron beat-Vb + chr3R 12925447 intron beat-Vb + chr3R_6_12920001 chr3R_12920001 OSS_C 1909 chr3R 13135776 13135842 chr3R 13138026 13138092 pogo 11 2251 3.5 2.5 3.0 2.8 2316 chr3R 13135776 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13136934 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138092 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_11_13135001 chr3R_13135001 OSS_C 1910 chr3R 13142980 13143047 chr3R 13148630 13148698 mdg3 11 5652 4.5 4.5 4.5 2.0 5718 chr3R 13142980 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145839 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148698 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_11_13145001 chr3R_13145001 OSS_C 1924 chr3R 14021582 14021658 chr3R 14023474 14023551 S-element 9 1893 6.5 1.5 4.0 1.8 1969 chr3R 14021582 intron rdx - chr3R 14022566 intron rdx - chr3R 14023551 intron rdx - chr3R_9_14020001 chr3R_14020001 OSS_C 1928 chr3R 14194380 14194426 chr3R 14203605 14203650 roo 8 9222 7.5 2.0 4.8 1.4 9270 chr3R 14194380 intron Dop1R1 - chr3R 14199015 intron Dop1R1 - chr3R 14203650 intron Dop1R1 - chr3R_8_14195001 chr3R_14195001 OSS_C 1929 chr3R 14246334 14246413 chr3R 14247906 14247984 jockey 10 1573 3.5 5.0 4.2 1.9 1650 chr3R 14246334 intergenic not near genes chr3R 14247159 intergenic not near genes chr3R 14247984 intergenic not near genes chr3R_10_14245001 chr3R_14245001 OSS_C 1943 chr3R 15041359 15041441 chr3R 15045203 15045285 Doc 9 3844 1.0 3.5 2.2 2.8 3926 chr3R 15041359 intergenic not near genes chr3R 15043322 intergenic not near genes chr3R 15045285 intergenic not near genes chr3R_9_15040001 chr3R_15040001 OSS_C 1944 chr3R 15079748 15079814 chr3R 15080065 15080123 pogo 10 315 6.0 2.5 4.2 1.9 375 chr3R 15079748 3` UTR CG6966 - chr3R 15079936 3` UTR CG6966 - chr3R 15080123 3` UTR CG6966 - chr3R_10_15075001 chr3R_15075001 OSS_C 1947 chr3R 15132007 15132066 chr3R 15135142 15135208 Juan 10 3138 6.0 10.0 8.0 1.1 3201 chr3R 15132007 intergenic CG42788 - chr3R 15133608 intergenic not near genes chr3R 15135208 exon CG6912 - chr3R_10_15130001 chr3R_15130001 OSS_C 1949 chr3R 15162479 15162563 chr3R 15167322 15167407 F-element 11 4844 5.0 2.0 3.5 2.4 4928 chr3R 15162479 intron Gyc88E + chr3R 15164943 intron Gyc88E + chr3R 15167407 intron Gyc88E + chr3R_11_15160001 chr3R_15160001 OSS_C 1956 chr3R 15601109 15601175 chr3R 15608707 15608773 412 13 7598 3.5 8.0 5.8 1.9 7664 chr3R 15601109 intergenic not near genes chr3R 15604941 intergenic not near genes chr3R 15608773 intergenic not near genes chr3R_13_15600001 chr3R_15600001 OSS_C 1960 chr3R 15735178 15735234 chr3R 15739974 15740030 F-element 5 4796 1.0 3.0 2.0 1.7 4852 chr3R 15735178 intergenic not near genes chr3R 15737604 intergenic not near genes chr3R 15740030 intergenic not near genes chr3R_5_15735001 chr3R_15735001 OSS_C 1972 chr3R 16756259 16756337 chr3R 16762525 16762604 diver 10 6266 5.0 2.0 3.5 2.2 6345 chr3R 16756259 intron bxd - chr3R 16759432 intron bxd - chr3R 16762604 intron bxd - chr3R_10_16755001 chr3R_16755001 OSS_C 1988 chr3R 17294615 17294666 chr3R 17295119 17295170 BS 4 504 1.5 1.5 1.5 1.6 555 chr3R 17294615 intergenic not near genes chr3R 17294892 intergenic not near genes chr3R 17295170 intergenic not near genes chr3R_4_17290001 chr3R_17290001 OSS_C 1992 chr3R 17509173 17509236 chr3R 17516804 17516867 412 9 7630 15.0 14.5 14.8 0.6 7694 chr3R 17509173 intergenic not near genes chr3R 17513020 intergenic not near genes chr3R 17516867 intergenic not near genes chr3R_9_17510001 chr3R_17510001 OSS_C 1994 chr3R 17591234 17591306 chr3R 17591746 17591818 F-element 15 512 5.0 1.5 3.2 3.6 584 chr3R 17591234 intergenic not near genes chr3R 17591526 intergenic not near genes chr3R 17591818 intergenic not near genes chr3R_15_17590001 chr3R_17590001 OSS_C 1998 chr3R 17763165 17763182 chr3R 17763727 17763744 roo 7 562 5.5 10.5 8.0 0.8 579 chr3R 17763165 5` UTR TyrR - chr3R 17763454 intergenic TyrR - chr3R 17763744 intergenic not near genes chr3R_7_17760001 chr3R_17760001 OSS_C 2011 chr3R 18606446 18606492 chr3R 18610754 18610800 F-element 7 4308 5.5 3.5 4.5 1.3 4354 chr3R 18606446 intron,intron qin +,CG14304 - chr3R 18608623 intron,intron qin +,CG14304 - chr3R 18610800 intron,intron qin +,CG14304 - chr3R_7_18605001 chr3R_18605001 OSS_C 2030 chr3R 19744179 19744210 chr3R 19749498 19749531 Rt1a 10 5320 19.5 7.0 13.2 0.7 5352 chr3R 19744179 intron,intron GluClalpha +,CR43488 - chr3R 19746855 intron GluClalpha + chr3R 19749531 intron GluClalpha + chr3R_10_19745001 chr3R_19745001 OSS_C 2041 chr3R 20156637 20156698 chr3R 20165883 20165944 roo 5 9246 6.0 1.5 3.8 1.0 9307 chr3R 20156637 intergenic not near genes chr3R 20161290 intergenic not near genes chr3R 20165944 intergenic not near genes chr3R_5_20160001 chr3R_20160001 OSS_C 2049 chr3R 20330950 20330996 chr3R 20331512 20331557 roo 4 562 3.5 1.5 2.5 1.1 607 chr3R 20330950 intergenic Sirt2 + chr3R 20331254 intergenic Sirt2 + chr3R 20331557 intergenic not near genes chr3R_4_20330001 chr3R_20330001 OSS_C 2054 chr3R 20506583 20506597 chr3R 20507462 20507475 BS 6 879 7.5 7.5 7.5 0.7 892 chr3R 20506583 intergenic Or92a + chr3R 20507029 intergenic CG4288 - chr3R 20507475 3` UTR CG4288 - chr3R_6_20505001 chr3R_20505001 OSS_C 2056 chr3R 20613111 20613149 chr3R 20613270 20613307 INE-1 8 158 4.0 9.0 6.5 1.1 196 chr3R 20613111 intron CG15923 - chr3R 20613209 intron CG15923 - chr3R 20613307 intron CG15923 - chr3R_8_20610001 chr3R_20610001 OSS_C 2058 chr3R 20854411 20854503 chr3R 20859282 20859369 Doc 9 4869 2.0 4.0 3.0 2.2 4958 chr3R 20854411 exon Ir93a - chr3R 20856890 intron Ir93a - chr3R 20859369 intron Ir93a - chr3R_9_20855001 chr3R_20855001 OSS_C 2067 chr3R 21141626 21141695 chr3R 21150182 21150251 Tirant 5 8556 5.0 6.0 5.5 0.8 8625 chr3R 21141626 intron SNF4Agamma + chr3R 21145938 intron SNF4Agamma + chr3R 21150251 intron SNF4Agamma + chr3R_5_21145001 chr3R_21145001 OSS_C 2082 chr3R 21761064 21761127 chr3R 21768532 21768595 mdg1 4 7468 9.5 7.5 8.5 0.4 7531 chr3R 21761064 exon CG42335 + chr3R 21764830 intron CG42335 + chr3R 21768595 exon CG42335 + chr3R_4_21760001 chr3R_21760001 OSS_C 2101 chr3R 22234613 22234693 chr3R 22236008 22236088 pogo 9 1395 4.0 1.5 2.8 2.4 1475 chr3R 22234613 intron SKIP + chr3R 22235350 intron SKIP + chr3R 22236088 intron SKIP + chr3R_9_22235001 chr3R_22235001 OSS_C 2102 chr3R 22239455 22239507 chr3R 22248591 22248643 roo 10 9136 4.5 6.0 5.2 1.6 9188 chr3R 22239455 intron SKIP + chr3R 22244049 intron SKIP + chr3R 22248643 intron SKIP + chr3R_10_22240001 chr3R_22240001 OSS_C 2106 chr3R 22450487 22450564 chr3R 22453203 22453280 NOF 11 2716 7.5 5.0 6.2 1.5 2793 chr3R 22450487 intron CG34376 + chr3R 22451884 intron CG34376 + chr3R 22453280 intron CG34376 + chr3R_11_22450001 chr3R_22450001 OSS_C 2130 chr3R 23558349 23558415 chr3R 23560206 23560271 Bari1 7 1857 2.0 7.0 4.5 1.3 1922 chr3R 23558349 intron beat-IV + chr3R 23559310 intron beat-IV + chr3R 23560271 intron beat-IV + chr3R_7_23555001 chr3R_23555001 OSS_C 2132 chr3R 23684636 23684715 chr3R 23685198 23685277 roo 26 562 9.5 6.5 8.0 2.9 641 chr3R 23684636 exon CG18754 + chr3R 23684956 intron CG18754 + chr3R 23685277 exon CG18754 + chr3R_26_23680001 chr3R_23680001 OSS_C 2134 chr3R 23835349 23835402 chr3R 23844575 23844625 roo 5 9225 4.0 0.5 2.2 1.6 9276 chr3R 23835349 intron CG34355 + chr3R 23839987 intron CG34355 + chr3R 23844625 intron CG34355 + chr3R_5_23835001 chr3R_23835001 OSS_C 2135 chr3R 23851018 23851075 chr3R 23858760 23858818 opus 9 7743 3.5 2.5 3.0 2.2 7800 chr3R 23851018 3` UTR CG34355 + chr3R 23854918 intergenic not near genes chr3R 23858818 intergenic not near genes chr3R_9_23850001 chr3R_23850001 OSS_C 2143 chr3R 24072059 24072123 chr3R 24072571 24072635 jockey 16 512 3.5 2.0 2.8 4.2 576 chr3R 24072059 intron 4EHP - chr3R 24072347 intron 4EHP - chr3R 24072635 intron 4EHP - chr3R_16_24070001 chr3R_24070001 OSS_C 2144 chr3R 24076862 24076932 chr3R 24078405 24078475 hobo 11 1543 4.0 7.0 5.5 1.7 1613 chr3R 24076862 intron 4EHP - chr3R 24077668 intron 4EHP - chr3R 24078475 intron 4EHP - chr3R_11_24075001 chr3R_24075001 OSS_C 2146 chr3R 24207157 24207219 chr3R 24212309 24212371 flea 5 5152 19.0 7.0 13.0 0.4 5214 chr3R 24207157 intron twin - chr3R 24209764 intron twin - chr3R 24212371 intron twin - chr3R_5_24205001 chr3R_24205001 OSS_C 2150 chr3R 24927074 24927134 chr3R 24931941 24932001 Doc 8 4867 2.0 6.5 4.2 1.5 4927 chr3R 24927074 3` UTR Trf4-2 + chr3R 24929538 intergenic not near genes chr3R 24932001 intergenic CG11771 + chr3R_8_24925001 chr3R_24925001 OSS_C 2164 chr3R 25832641 25832702 chr3R 25841899 25841959 roo 9 9258 3.5 3.5 3.5 2.0 9318 chr3R 25832641 exon alpha4GT2 + chr3R 25837300 intron alpha4GT2 + chr3R 25841959 exon alpha4GT2 + chr3R_9_25835001 chr3R_25835001 OSS_C 2180 chr3R 26376265 26376342 chr3R 26385500 26385578 roo 14 9236 3.5 4.5 4.0 2.8 9313 chr3R 26376265 intergenic not near genes chr3R 26380922 intergenic not near genes chr3R 26385578 intergenic not near genes chr3R_14_26380001 chr3R_26380001 OSS_C 2184 chr3R 26558260 26558346 chr3R 26565649 26565734 Stalker4 9 7388 4.0 6.5 5.2 1.5 7474 chr3R 26558260 intron scrib + chr3R 26561997 intron scrib + chr3R 26565734 intron scrib + chr3R_9_26560001 chr3R_26560001 OSS_C 2186 chr3R 26642681 26642736 chr3R 26643150 26643205 jockey 4 469 4.0 3.5 3.8 0.8 524 chr3R 26642681 intergenic not near genes chr3R 26642943 intergenic not near genes chr3R 26643205 intergenic not near genes chr3R_4_26640001 chr3R_26640001 OSS_C 2191 chr3R 26810535 26810569 chr3R 26811096 26811129 roo 5 561 2.0 12.5 7.2 0.6 594 chr3R 26810535 intron Tl + chr3R 26810832 intron Tl + chr3R 26811129 intron Tl + chr3R_5_26810001 chr3R_26810001 OSS_C 2196 chr3R 27007341 27007413 chr3R 27016552 27016624 roo 5 9211 4.0 3.0 3.5 1.1 9283 chr3R 27007341 intron RYa-R + chr3R 27011982 intron RYa-R + chr3R 27016624 intron RYa-R + chr3R_5_27010001 chr3R_27010001 OSS_C 2200 chr3R 27140467 27140533 chr3R 27148153 27148218 412 11 7686 2.0 3.0 2.5 3.1 7751 chr3R 27140467 intron CG6051 - chr3R 27144342 intron CG6051 - chr3R 27148218 intron CG6051 - chr3R_11_27140001 chr3R_27140001 OSS_C 2206 chr3R 27342730 27342813 chr3R 27351387 27351470 Tirant 17 8657 3.0 5.5 4.2 3.3 8740 chr3R 27342730 intron CG42534 + chr3R 27347100 intron CG42534 + chr3R 27351470 intron CG42534 + chr3R_17_27345001 chr3R_27345001 OSS_C 2210 chr3R 27521110 27521168 chr3R 27530395 27530453 roo 5 9285 4.5 2.0 3.2 1.2 9343 chr3R 27521110 intron CG12885 + chr3R 27525782 intron CG12885 + chr3R 27530453 intron CG12885 + chr3R_5_27525001 chr3R_27525001 OSS_C 2214 chr3R 27725508 27725581 chr3R 27731025 27731099 I-element 8 5518 5.0 5.0 5.0 1.3 5591 chr3R 27725508 intergenic not near genes chr3R 27728304 intergenic not near genes chr3R 27731099 intergenic not near genes chr3R_8_27725001 chr3R_27725001 OSS_C 2216 chr3R 27791586 27791634 chr3R 27794804 27794851 Rt1c 11 3217 6.5 10.5 8.5 1.2 3265 chr3R 27791586 intron CG34353 - chr3R 27793218 intron CG34353 - chr3R 27794851 intron CG34353 - chr3R_11_27790001 chr3R_27790001 OSS_C 2217 chr3R 27856696 27856768 chr3R 27858255 27858327 hopper2 11 1559 2.0 2.5 2.2 3.4 1631 chr3R 27856696 intron CG34353 - chr3R 27857512 intron CG34353 - chr3R 27858327 intron CG34353 - chr3R_11_27855001 chr3R_27855001 OSS_C 2218 chr3R 27862898 27862972 chr3R 27868278 27868353 Transpac 6 5381 1.5 3.5 2.5 1.7 5455 chr3R 27862898 intron CG34353 - chr3R 27865626 intron CG34353 - chr3R 27868353 intron CG34353 - chr3R_6_27865001 chr3R_27865001 OSS_C 2219 chr3R 27875643 27875705 chr3R 27882774 27882835 297 17 7131 4.0 4.0 4.0 3.4 7192 chr3R 27875643 intron CG34353 - chr3R 27879239 intron CG34353 - chr3R 27882835 intron CG34353 - chr3R_17_27875001 chr3R_27875001 OSS_C 2224 chr3R 28173599 28173687 chr3R 28181103 28181193 mdg1 6 7506 3.0 2.5 2.8 1.6 7594 chr3R 28173599 intron CG34354 + chr3R 28177396 intron CG34354 + chr3R 28181193 intron CG34354 + chr3R_6_28175001 chr3R_28175001 OSS_C 2226 chr3R 28253302 28253356 chr3R 28255887 28255941 jockey 5 2585 4.0 5.5 4.8 0.9 2639 chr3R 28253302 intergenic not near genes chr3R 28254622 intergenic not near genes chr3R 28255941 intergenic not near genes chr3R_5_28250001 chr3R_28250001 OSS_C 2236 chr3R 29319829 29319842 chr3R 29320224 29320237 jockey 4 395 2.0 5.5 3.8 0.8 408 chr3R 29319829 intergenic Cnx99A - chr3R 29320033 intergenic Cnx99A - chr3R 29320237 intergenic not near genes chr3R_4_29320001 chr3R_29320001 OSS_C 2244 chr3R 29406554 29406625 chr3R 29407916 29407987 jockey 11 1362 6.5 3.5 5.0 1.8 1433 chr3R 29406554 intron Ptp99A + chr3R 29407270 intron Ptp99A + chr3R 29407987 intron Ptp99A + chr3R_11_29405001 chr3R_29405001 OSS_C 2251 chr3R 29738249 29738287 chr3R 29739793 29739831 hobo 8 1544 3.0 2.5 2.8 2.1 1582 chr3R 29738249 intergenic CG1969 +,CG7598 + chr3R 29739040 intron CG1969 + chr3R 29739831 5` UTR CG1969 + chr3R_8_29735001 chr3R_29735001 OSS_C 2252 chr3R 29760298 29760350 chr3R 29761575 29761626 pogo 7 1277 3.0 0.0 1.5 2.8 1328 chr3R 29760298 intergenic not near genes chr3R 29760962 intergenic not near genes chr3R 29761626 intergenic not near genes chr3R_7_29760001 chr3R_29760001 OSS_C 2255 chr3R 29881965 29882014 chr3R 29891198 29891247 roo 5 9232 5.5 3.5 4.5 0.9 9282 chr3R 29881965 intron CG31038 + chr3R 29886606 intron CG31038 + chr3R 29891247 intron CG31038 + chr3R_5_29885001 chr3R_29885001 OSS_C 2260 chr3R 30084803 30084867 chr3R 30086344 30086409 hobo 7 1542 3.0 1.0 2.0 2.3 1606 chr3R 30084803 intron sima + chr3R 30085606 intron sima + chr3R 30086409 intron sima + chr3R_7_30085001 chr3R_30085001 OSS_C 2264 chr3R 30238696 30238783 chr3R 30239944 30240032 1360 11 1249 2.5 0.5 1.5 4.4 1336 chr3R 30238696 intergenic not near genes chr3R 30239364 intergenic not near genes chr3R 30240032 intergenic not near genes chr3R_11_30235001 chr3R_30235001 OSS_C 2269 chr3R 30375479 30375569 chr3R 30383178 30383268 412 7 7699 2.5 1.0 1.8 2.5 7789 chr3R 30375479 intergenic not near genes chr3R 30379374 intergenic not near genes chr3R 30383268 intergenic not near genes chr3R_7_30375001 chr3R_30375001 OSS_C 2270 chr3R 30396157 30396227 chr3R 30404499 30404569 roo 6 8342 3.5 3.5 3.5 1.3 8412 chr3R 30396157 intergenic not near genes chr3R 30400363 intergenic not near genes chr3R 30404569 5` UTR CR45570 + chr3R_6_30400001 chr3R_30400001 OSS_C 2272 chr3R 30480423 30480481 chr3R 30482967 30483025 jockey 6 2544 3.0 0.0 1.5 2.4 2602 chr3R 30480423 intron PH4alphaEFB + chr3R 30481724 intron PH4alphaEFB + chr3R 30483025 intron PH4alphaEFB + chr3R_6_30480001 chr3R_30480001 OSS_C 2281 chr3R 30679455 30679516 chr3R 30686999 30687061 blood 6 7544 2.0 3.0 2.5 1.7 7606 chr3R 30679455 intergenic not near genes chr3R 30683258 intergenic not near genes chr3R 30687061 intergenic not near genes chr3R_6_30680001 chr3R_30680001 OSS_C 2288 chr3R 31074199 31074253 chr3R 31081879 31081934 springer 8 7680 17.0 4.0 10.5 0.7 7735 chr3R 31074199 intron Sox100B + chr3R 31078066 intron Sox100B + chr3R 31081934 exon Sox100B + chr3R_8_31075001 chr3R_31075001 OSS_C 2295 chr3R 31279337 31279391 chr3R 31285603 31285658 diver 7 6266 4.0 7.0 5.5 1.1 6321 chr3R 31279337 intergenic not near genes chr3R 31282498 intergenic not near genes chr3R 31285658 intergenic not near genes chr3R_7_31280001 chr3R_31280001 OSS_C 2298 chr3R 31413028 31413108 chr3R 31418304 31418384 copia 4 5276 4.5 3.0 3.8 0.8 5356 chr3R 31413028 intron Gprk2 + chr3R 31415706 intron Gprk2 + chr3R 31418384 intron Gprk2 + chr3R_4_31415001 chr3R_31415001 OSS_C 2309 chr3R 31691467 31691542 chr3R 31696309 31696384 Doc 17 4842 5.5 6.0 5.8 2.5 4917 chr3R 31691467 intergenic not near genes chr3R 31693926 intergenic not near genes chr3R 31696384 intergenic not near genes chr3R_17_31690001 chr3R_31690001 OSS_C 2319 chr3R 31997929 31997973 chr3R 32005474 32005519 blood 4 7545 3.5 0.5 2.0 1.3 7590 chr3R 31997929 intron heph - chr3R 32001724 intron heph - chr3R 32005519 intron heph - chr3R_4_32000001 chr3R_32000001 OSS_C 2322 chr4 76438 76489 chr4 81957 82007 I-element 8 5518 6.5 2.0 4.2 1.5 5569 chr4 76438 intron pan + chr4 79222 intron pan + chr4 82007 intron pan + chr4_8_75001 chr4_75001 OSS_C 2325 chr4 611605 611737 chr4 613613 613674 1360 4 1990 13.5 8.0 10.8 0.3 2069 chr4 611605 exon Eph + chr4 612640 intron Eph + chr4 613674 exon Eph + chr4_4_610001 chr4_610001 OSS_C 2326 chr4 671561 671613 chr4 680219 680271 Tirant 7 8658 5.5 7.0 6.2 1.0 8710 chr4 671561 intron CG11360 + chr4 675916 intron CG11360 + chr4 680271 intron CG11360 + chr4_7_675001 chr4_675001 OSS_C 2331 chrX 428376 428436 chrX 434637 434696 3S18 9 6261 3.5 4.5 4.0 1.8 6320 chrX 428376 intron CG32816 - chrX 431536 intron CG32816 - chrX 434696 intron CG32816 - chrX_9_430001 chrX_430001 OSS_C 2332 chrX 827540 827617 chrX 835407 835484 roo 13 7868 3.0 3.5 3.2 3.1 7944 chrX 827540 intron CG43867 - chrX 831512 intron CG43867 - chrX 835484 intron CG43867 - chrX_13_830001 chrX_830001 OSS_C 2333 chrX 906635 906711 chrX 908500 908575 S-element 11 1865 5.5 10.5 8.0 1.2 1940 chrX 906635 intron CG43867 - chrX 907605 intron CG43867 - chrX 908575 intron CG43867 - chrX_11_905001 chrX_905001 OSS_C 2335 chrX 1033288 1033320 chrX 1040997 1041028 412 7 7709 8.0 8.0 8.0 0.8 7740 chrX 1033288 intron su(w[a]) + chrX 1037158 intron su(w[a]) + chrX 1041028 intron su(w[a]) + chrX_7_1035001 chrX_1035001 OSS_C 2336 chrX 1063719 1063750 chrX 1072588 1072618 roo 4 8869 5.0 9.5 7.2 0.5 8899 chrX 1063719 intron CR44779 + chrX 1068168 intron CR44779 + chrX 1072618 intron CR44779 + chrX_4_1065001 chrX_1065001 OSS_C 2337 chrX 1737106 1737127 chrX 1746347 1746368 roo 7 9241 15.0 19.0 17.0 0.4 9262 chrX 1737106 3` UTR Scgdelta - chrX 1741737 intron Scgdelta - chrX 1746368 3` UTR Scgdelta - chrX_7_1740001 chrX_1740001 OSS_C 2338 chrX 1954822 1954897 chrX 1962838 1962913 Stalker2 13 8016 16.0 16.0 16.0 0.8 8091 chrX 1954822 intron Hr4 + chrX 1958868 intron Hr4 + chrX 1962913 intron Hr4 + chrX_13_1955001 chrX_1955001 OSS_C 2340 chrX 2308774 2308813 chrX 2317433 2317472 Tirant 15 8659 5.5 9.5 7.5 1.8 8698 chrX 2308774 intron phl + chrX 2313123 intron phl + chrX 2317472 intron phl + chrX_15_2310001 chrX_2310001 OSS_C 2344 chrX 2399777 2399853 chrX 2408205 2408282 roo 25 8428 6.5 7.5 7.0 3.1 8505 chrX 2399777 intergenic not near genes chrX 2404030 intergenic not near genes chrX 2408282 intergenic not near genes chrX_25_2400001 chrX_2400001 OSS_C 2347 chrX 2610362 2610371 chrX 2617555 2617563 HMS-Beagle 5 7192 5.0 3.0 4.0 1.0 7201 chrX 2610362 intergenic CG8636 - chrX 2613962 intergenic not near genes chrX 2617563 intergenic Tsp3A - chrX_5_2610001 chrX_2610001 OSS_C 2352 chrX 2823737 2823775 chrX 2832361 2832399 roo 9 8624 7.0 3.0 5.0 1.5 8662 chrX 2823737 intron kirre + chrX 2828068 intron kirre + chrX 2832399 intron kirre + chrX_9_2825001 chrX_2825001 OSS_C 2353 chrX 2844858 2844919 chrX 2852343 2852405 mdg1 6 7486 3.0 4.0 3.5 1.3 7547 chrX 2844858 intron kirre + chrX 2848632 intron kirre + chrX 2852405 intron kirre + chrX_6_2845001 chrX_2845001 OSS_C 2357 chrX 3057994 3058024 chrX 3058311 3058341 pogo 6 317 4.5 6.0 5.2 1.0 347 chrX 3057994 intron kirre + chrX 3058168 intron kirre + chrX 3058341 intron kirre + chrX_6_3055001 chrX_3055001 OSS_C 2358 chrX 3075580 3075654 chrX 3080962 3081036 Transpac 14 5382 2.5 5.5 4.0 2.8 5456 chrX 3075580 intron kirre + chrX 3078308 intron kirre + chrX 3081036 intron kirre + chrX_14_3075001 chrX_3075001 OSS_C 2372 chrX 3414955 3415033 chrX 3421215 3421294 3S18 5 6260 2.0 1.0 1.5 2.0 6339 chrX 3414955 intron,intron CR44999 +,CG12535 - chrX 3418124 intron,intron CR44999 +,CG12535 - chrX 3421294 intron,intron CR44999 +,CG12535 - chrX_5_3415001 chrX_3415001 OSS_C 2375 chrX 3493029 3493112 chrX 3502263 3502347 roo 8 9234 2.0 1.0 1.5 3.2 9318 chrX 3493029 intron,exon CR44999 +,Gas8 - chrX 3497688 intron,intron CR44999 +,Gas8 - chrX 3502347 intron,intron CR44999 +,Gas8 - chrX_8_3495001 chrX_3495001 OSS_C 2378 chrX 3597492 3597576 chrX 3619735 3619818 roo 25 22243 4.5 8.5 6.5 3.3 22326 chrX 3597492 intron AstA-R1 + chrX 3608655 intron AstA-R1 + chrX 3619818 intron AstA-R1 + chrX_25_3605001 chrX_3605001 OSS_C 2383 chrX 3726716 3726797 chrX 3730189 3730238 NOF 8 3461 1.0 4.5 2.8 2.1 3522 chrX 3726716 intron tlk + chrX 3728477 intron tlk + chrX 3730238 intron tlk + chrX_8_3725001 chrX_3725001 OSS_C 2385 chrX 3842258 3842335 chrX 3842574 3842651 pogo 17 313 8.5 2.5 5.5 2.6 393 chrX 3842258 intron ec + chrX 3842454 intron ec + chrX 3842651 intron ec + chrX_17_3840001 chrX_3840001 OSS_C 2387 chrX 3986834 3986871 chrX 3994543 3994579 412 8 7709 3.0 6.0 4.5 1.5 7745 chrX 3986834 intergenic not near genes chrX 3990706 intergenic not near genes chrX 3994579 intergenic not near genes chrX_8_3990001 chrX_3990001 OSS_C 2392 chrX 4157832 4157904 chrX 4164943 4165014 297 14 7120 6.5 2.5 4.5 2.5 7182 chrX 4157832 intron Fas2 - chrX 4161423 intron Fas2 - chrX 4165014 intron Fas2 - chrX_14_4160001 chrX_4160001 OSS_C 2401 chrX 4700345 4700400 chrX 4700764 4700819 jockey 5 419 5.0 5.0 5.0 0.8 474 chrX 4700345 3` UTR ctp + chrX 4700582 3` UTR ctp + chrX 4700819 3` UTR ctp + chrX_5_4700001 chrX_4700001 OSS_C 2403 chrX 4731751 4731833 chrX 4736920 4736996 jockey 6 5167 4.5 8.5 6.5 0.8 5245 chrX 4731751 intergenic not near genes chrX 4734374 intergenic not near genes chrX 4736996 intergenic not near genes chrX_6_4730001 chrX_4730001 OSS_C 2405 chrX 4763195 4763261 chrX 4763759 4763824 Stalker4 4 564 14.0 7.0 10.5 0.3 629 chrX 4763195 intergenic not near genes chrX 4763510 intergenic not near genes chrX 4763824 intergenic not near genes chrX_4_4760001 chrX_4760001 OSS_C 2406 chrX 4792340 4792388 chrX 4792849 4792896 jockey 10 509 3.5 11.0 7.2 1.2 556 chrX 4792340 intergenic not near genes chrX 4792618 intergenic not near genes chrX 4792896 intergenic not near genes chrX_10_4790001 chrX_4790001 OSS_C 2408 chrX 4827911 4827987 chrX 4835358 4835433 Stalker4 19 7447 7.5 8.5 8.0 2.1 7522 chrX 4827911 intergenic not near genes chrX 4831672 intergenic not near genes chrX 4835433 intergenic not near genes chrX_19_4830001 chrX_4830001 OSS_C 2411 chrX 4989989 4990057 chrX 4997278 4997346 roo 8 7289 0.0 7.0 3.5 1.8 7357 chrX 4989989 intron CR44833 - chrX 4993668 intron CR44833 - chrX 4997346 intron CR44833 - chrX_8_4990001 chrX_4990001 OSS_C 2412 chrX 5096228 5096249 chrX 5103869 5103890 springer 4 7641 5.5 12.5 9.0 0.4 7662 chrX 5096228 intron,intron CG15465 +,rg + chrX 5100059 intron,intron CG15465 +,rg + chrX 5103890 intron,intron CG15465 +,rg + chrX_4_5100001 chrX_5100001 OSS_C 2416 chrX 5338640 5338729 chrX 5339969 5340057 jockey 13 1329 1.0 2.0 1.5 5.2 1417 chrX 5338640 intergenic not near genes chrX 5339348 intergenic not near genes chrX 5340057 intergenic SK + chrX_13_5335001 chrX_5335001 OSS_C 2419 chrX 5524789 5524806 chrX 5528724 5528741 412 6 3935 13.0 1.5 7.2 0.7 3952 chrX 5524789 intergenic snoRNA:Psi28S-3342 - chrX 5526765 intergenic not near genes chrX 5528741 intergenic Vsx2 - chrX_6_5525001 chrX_5525001 OSS_C 2420 chrX 5537644 5537683 chrX 5537803 5537842 roo 7 159 25.0 14.5 19.8 0.3 198 chrX 5537644 intron Vsx2 - chrX 5537743 intron Vsx2 - chrX 5537842 intron Vsx2 - chrX_7_5535001 chrX_5535001 OSS_C 2424 chrX 5727349 5727410 chrX 5732163 5732224 Doc 10 4815 6.5 3.5 5.0 1.7 4875 chrX 5727349 intron CG32758 - chrX 5729786 intron CG32758 - chrX 5732224 intron CG32758 - chrX_10_5725001 chrX_5725001 OSS_C 2427 chrX 5883747 5883828 chrX 5884064 5884145 pogo 11 317 2.0 2.0 2.0 3.7 398 chrX 5883747 intron CR45668 - chrX 5883946 intron CR45668 - chrX 5884145 intron CR45668 - chrX_11_5880001 chrX_5880001 OSS_C 2428 chrX 5884105 5884178 chrX 5884421 5884495 pogo 10 317 2.0 3.5 2.8 2.6 390 chrX 5884105 intron CR45668 - chrX 5884300 intron CR45668 - chrX 5884495 intron CR45668 - chrX_10_5880001 chrX_5880001 OSS_C 2432 chrX 6171521 6171594 chrX 6179029 6179102 Quasimodo 14 7511 2.0 4.0 3.0 3.5 7581 chrX 6171521 intron Ca-alpha1T - chrX 6175312 intron Ca-alpha1T - chrX 6179102 intron Ca-alpha1T - chrX_14_6175001 chrX_6175001 OSS_C 2438 chrX 6392814 6392873 chrX 6397655 6397714 Doc 11 4841 6.0 3.0 4.5 2.0 4900 chrX 6392814 intergenic not near genes chrX 6395264 intergenic not near genes chrX 6397714 intergenic not near genes chrX_11_6395001 chrX_6395001 OSS_C 2440 chrX 6562760 6562838 chrX 6571318 6571396 Tirant 35 8558 4.5 16.0 10.2 3.1 8636 chrX 6562760 intron CG34417 + chrX 6567078 intron CG34417 + chrX 6571396 intron CG34417 + chrX_35_6565001 chrX_6565001 OSS_C 2452 chrX 7023547 7023621 chrX 7031012 7031085 Tabor 17 7465 1.0 5.0 3.0 4.2 7538 chrX 7023547 intron CG12541 - chrX 7027316 intron CG12541 - chrX 7031085 intron CG12541 - chrX_17_7025001 chrX_7025001 OSS_C 2454 chrX 7125221 7125260 chrX 7134456 7134494 roo 7 9235 0.0 3.0 1.5 2.8 9273 chrX 7125221 intergenic not near genes chrX 7129858 intergenic not near genes chrX 7134494 intergenic not near genes chrX_7_7125001 chrX_7125001 OSS_C 2462 chrX 7702844 7702895 chrX 7703359 7703409 jockey 7 515 12.5 1.5 7.0 0.9 565 chrX 7702844 intron CHES-1-like - chrX 7703126 intron CHES-1-like - chrX 7703409 intron CHES-1-like - chrX_7_7700001 chrX_7700001 OSS_C 2464 chrX 8031373 8031452 chrX 8035758 8035834 Juan 14 4384 7.0 7.0 7.0 1.8 4461 chrX 8031373 intergenic not near genes chrX 8033604 intergenic not near genes chrX 8035834 3` UTR CG2233 - chrX_14_8030001 chrX_8030001 OSS_C 2468 chrX 8364787 8364847 chrX 8365259 8365320 BS 8 473 3.5 4.0 3.8 1.7 533 chrX 8364787 intron nAChRalpha3 - chrX 8365054 intron nAChRalpha3 - chrX 8365320 intron nAChRalpha3 - chrX_8_8365001 chrX_8365001 OSS_C 2477 chrX 8922266 8922351 chrX 8922775 8922861 jockey 21 510 7.0 5.0 6.0 3.0 595 chrX 8922266 intron rdgA + chrX 8922564 intron rdgA + chrX 8922861 intron rdgA + chrX_21_8920001 chrX_8920001 OSS_C 2487 chrX 9508093 9508150 chrX 9509686 9509743 jockey 13 1594 4.0 6.0 5.0 2.2 1650 chrX 9508093 intron CG32700 - chrX 9508918 intron CG32700 - chrX 9509743 intron CG32700 - chrX_13_9505001 chrX_9505001 OSS_C 2490 chrX 9575724 9575805 chrX 9576123 9576205 mdg3 23 399 13.5 4.5 9.0 2.3 481 chrX 9575724 intron,exon CG32699 -,CG42395 - chrX 9575964 intron,intron CG32699 -,CG42395 - chrX 9576205 intron,5` UTR CG32699 -,CG42395 - chrX_23_9575001 chrX_9575001 OSS_C 2502 chrX 10138167 10138233 chrX 10145747 10145812 412 12 7580 6.0 2.5 4.2 2.3 7645 chrX 10138167 intron,intron RhoU +,CR44894 - chrX 10141990 intron,intron RhoU +,CR44894 - chrX 10145812 intron,intron RhoU +,CR44894 - chrX_12_10140001 chrX_10140001 OSS_C 2508 chrX 10348746 10348793 chrX 10356387 10356433 springer 4 7640 13.0 0.5 6.8 0.5 7687 chrX 10348746 intergenic snoRNA:U3:9B + chrX 10352590 intergenic not near genes chrX 10356433 intergenic l(1)G0289 - chrX_4_10350001 chrX_10350001 OSS_C 2513 chrX 10550791 10550868 chrX 10552334 10552410 hobo 13 1543 5.0 4.0 4.5 2.4 1619 chrX 10550791 intron spri - chrX 10551600 intron spri - chrX 10552410 intron spri - chrX_13_10550001 chrX_10550001 OSS_C 2515 chrX 10685996 10686056 chrX 10691209 10691269 roo 6 5212 2.0 5.0 3.5 1.3 5273 chrX 10685996 intron X11Lbeta + chrX 10688632 intron X11Lbeta + chrX 10691269 intron X11Lbeta + chrX_6_10685001 chrX_10685001 OSS_C 2517 chrX 10772620 10772698 chrX 10772778 10772856 Tirant 25 159 10.5 6.5 8.5 2.6 236 chrX 10772620 5` UTR CG15211 + chrX 10772738 intron CG15211 + chrX 10772856 intron CG15211 + chrX_25_10770001 chrX_10770001 OSS_C 2522 chrX 11184186 11184236 chrX 11189340 11189388 flea 5 5154 6.5 2.0 4.2 1.0 5202 chrX 11184186 intergenic not near genes chrX 11186787 intergenic not near genes chrX 11189388 intergenic not near genes chrX_5_11185001 chrX_11185001 OSS_C 2525 chrX 11312020 11312076 chrX 11319449 11319505 Stalker2 6 7428 4.5 6.5 5.5 0.9 7485 chrX 11312020 intergenic not near genes chrX 11315762 intergenic not near genes chrX 11319505 intergenic not near genes chrX_6_11315001 chrX_11315001 OSS_C 2529 chrX 11534996 11535046 chrX 11541542 11541591 Burdock 6 6545 7.0 3.5 5.2 1.0 6595 chrX 11534996 intron Drak + chrX 11538294 intron Drak + chrX 11541591 intron Drak + chrX_6_11535001 chrX_11535001 OSS_C 2531 chrX 11633356 11633429 chrX 11640486 11640559 297 18 7130 11.5 3.5 7.5 2.1 7203 chrX 11633356 intron Ptp10D + chrX 11636958 intron Ptp10D + chrX 11640559 intron Ptp10D + chrX_18_11635001 chrX_11635001 OSS_C 2532 chrX 11645050 11645105 chrX 11648295 11648350 NOF 8 3244 2.5 0.0 1.2 3.6 3300 chrX 11645050 intron Ptp10D + chrX 11646700 intron Ptp10D + chrX 11648350 intron Ptp10D + chrX_8_11645001 chrX_11645001 OSS_C 2548 chrX 12381788 12381870 chrX 12385777 12385848 flea 7 3981 3.0 2.5 2.8 1.8 4060 chrX 12381788 intergenic not near genes chrX 12383818 intergenic not near genes chrX 12385848 intergenic not near genes chrX_7_12380001 chrX_12380001 OSS_C 2558 chrX 12930524 12930592 chrX 12937716 12937783 HMS-Beagle 6 7192 0.5 9.5 5.0 1.0 7259 chrX 12930524 intron fne + chrX 12934154 intron fne + chrX 12937783 intron fne + chrX_6_12930001 chrX_12930001 OSS_C 2572 chrX 13429417 13429461 chrX 13430642 13430685 jockey 6 1224 8.0 5.0 6.5 0.8 1268 chrX 13429417 intergenic not near genes chrX 13430051 intergenic not near genes chrX 13430685 intergenic not near genes chrX_6_13430001 chrX_13430001 OSS_C 2582 chrX 13937929 13937999 chrX 13941275 13941346 I-element 5 3347 3.0 2.0 2.5 1.4 3417 chrX 13937929 intron mamo - chrX 13939638 intron mamo - chrX 13941346 intron mamo - chrX_5_13935001 chrX_13935001 OSS_C 2584 chrX 14030679 14030702 chrX 14035341 14035364 copia 4 4662 1.0 2.5 1.8 1.4 4685 chrX 14030679 intergenic not near genes chrX 14033022 intergenic not near genes chrX 14035364 intergenic not near genes chrX_4_14030001 chrX_14030001 OSS_C 2587 chrX 14104971 14105035 chrX 14114198 14114262 roo 12 9227 3.0 2.5 2.8 3.2 9291 chrX 14104971 intergenic not near genes chrX 14109616 intergenic not near genes chrX 14114262 5` UTR CR44657 + chrX_12_14105001 chrX_14105001 OSS_C 2592 chrX 14416259 14416318 chrX 14421103 14421162 F-element 7 4843 3.0 0.5 1.8 2.5 4903 chrX 14416259 intron dpr8 + chrX 14418710 intron dpr8 + chrX 14421162 intron dpr8 + chrX_7_14415001 chrX_14415001 OSS_C 2598 chrX 14636419 14636476 chrX 14641936 14641992 I-element 11 5517 3.5 2.5 3.0 2.8 5573 chrX 14636419 intron NetA - chrX 14639206 intron NetA - chrX 14641992 intron NetA - chrX_11_14635001 chrX_14635001 OSS_C 2602 chrX 14818707 14818775 chrX 14823986 14824054 copia 8 5280 2.5 1.0 1.8 2.9 5347 chrX 14818707 intron rut - chrX 14821380 intron rut - chrX 14824054 intron rut - chrX_8_14820001 chrX_14820001 OSS_C 2603 chrX 14936810 14936848 chrX 14946142 14946181 roo 7 9333 3.5 2.0 2.8 1.8 9371 chrX 14936810 intron pdgy - chrX 14941496 intron pdgy - chrX 14946181 intron pdgy - chrX_7_14940001 chrX_14940001 OSS_C 2607 chrX 15034036 15034079 chrX 15041639 15041682 rover 8 7603 12.5 3.0 7.8 0.9 7646 chrX 15034036 intron,3` UTR hiw -,be + chrX 15037859 intron,intron hiw -,be + chrX 15041682 intron,3` UTR hiw -,be + chrX_8_15035001 chrX_15035001 OSS_C 2613 chrX 15273644 15273722 chrX 15274887 15274965 1360 19 1243 5.0 10.5 7.8 2.2 1321 chrX 15273644 intergenic not near genes chrX 15274304 intergenic not near genes chrX 15274965 intergenic not near genes chrX_19_15270001 chrX_15270001 OSS_C 2614 chrX 15326674 15326710 chrX 15326948 15326984 I-element 5 274 0.0 5.0 2.5 1.4 310 chrX 15326674 3` UTR Top1 + chrX 15326829 3` UTR Top1 + chrX 15326984 3` UTR Top1 + chrX_5_15325001 chrX_15325001 OSS_C 2616 chrX 15413007 15413068 chrX 15417384 15417446 Juan 11 4377 8.0 5.0 6.5 1.5 4439 chrX 15413007 intron Cngl - chrX 15415226 intron Cngl - chrX 15417446 intron Cngl - chrX_11_15415001 chrX_15415001 OSS_C 2617 chrX 15421849 15421913 chrX 15423436 15423500 pogo 5 1587 3.5 0.5 2.0 1.7 1651 chrX 15421849 intron Cngl - chrX 15422674 intron Cngl - chrX 15423500 intron Cngl - chrX_5_15420001 chrX_15420001 OSS_C 2629 chrX 16492598 16492663 chrX 16498251 16498316 mdg3 10 5653 3.0 4.0 3.5 2.2 5718 chrX 16492598 intron para - chrX 16495457 intron para - chrX 16498316 exon para - chrX_10_16495001 chrX_16495001 OSS_C 2642 chrX 17195168 17195198 chrX 17200330 17200359 flea 6 5161 1.5 2.5 2.0 2.0 5191 chrX 17195168 3` UTR baz + chrX 17197764 3` UTR baz + chrX 17200359 3` UTR baz + chrX_6_17195001 chrX_17195001 OSS_C 2652 chrX 17556880 17556959 chrX 17557455 17557534 mdg1 6 574 1.0 2.5 1.8 2.1 654 chrX 17556880 intron CG43658 - chrX 17557207 intron CG43658 - chrX 17557534 intron CG43658 - chrX_6_17555001 chrX_17555001 OSS_C 2657 chrX 18194015 18194072 chrX 18194626 18194682 BS 7 611 3.0 2.5 2.8 1.8 667 chrX 18194015 intron Frq2 + chrX 18194348 intron Frq2 + chrX 18194682 intron Frq2 + chrX_7_18190001 chrX_18190001 OSS_C 2664 chrX 18754293 18754338 chrX 18758035 18758080 297 5 3743 1.5 4.0 2.8 1.3 3787 chrX 18754293 intergenic not near genes chrX 18756186 intergenic not near genes chrX 18758080 intergenic not near genes chrX_5_18755001 chrX_18755001 OSS_C 2672 chrX 19136491 19136550 chrX 19143486 19143546 412 9 6996 4.0 5.0 4.5 1.6 7055 chrX 19136491 intergenic not near genes chrX 19140018 intergenic not near genes chrX 19143546 3` UTR RhoGAP18B - chrX_9_19140001 chrX_19140001 OSS_C 2676 chrX 19356931 19357019 chrX 19358448 19358558 NOF 5 1532 3.0 0.0 1.5 2.0 1627 chrX 19356931 intron kek5 + chrX 19357744 intron kek5 + chrX 19358558 intron kek5 + chrX_5_19355001 chrX_19355001 OSS_C 2677 chrX 19380108 19380158 chrX 19380425 19380475 pogo 7 317 5.5 5.5 5.5 1.1 367 chrX 19380108 intron kek5 + chrX 19380292 intron kek5 + chrX 19380475 intron kek5 + chrX_7_19380001 chrX_19380001 OSS_C 2679 chrX 19437231 19437279 chrX 19444823 19444872 Idefix 4 7593 2.0 1.0 1.5 1.6 7641 chrX 19437231 intron kek5 + chrX 19441052 intron kek5 + chrX 19444872 intron kek5 + chrX_4_19440001 chrX_19440001 OSS_C 2683 chrX 19472060 19472138 chrX 19472705 19472784 jockey 7 645 2.0 4.0 3.0 1.8 724 chrX 19472060 intergenic kek5 + chrX 19472422 intergenic not near genes chrX 19472784 intergenic not near genes chrX_7_19470001 chrX_19470001 OSS_C 2688 chrX 19710011 19710089 chrX 19711872 19711951 S-element 7 1862 9.5 10.0 9.8 0.6 1940 chrX 19710011 intron meso18E - chrX 19710981 intron meso18E - chrX 19711951 5` UTR meso18E - chrX_7_19710001 chrX_19710001 OSS_C 2691 chrX 19797293 19797334 chrX 19804681 19804723 Stalker4 8 7388 6.0 8.0 7.0 1.0 7430 chrX 19797293 intergenic not near genes chrX 19801008 intergenic not near genes chrX 19804723 intergenic not near genes chrX_8_19800001 chrX_19800001 OSS_C 2708 chrX 20377255 20377325 chrX 20378798 20378868 hobo 11 1543 4.0 12.5 8.2 1.2 1613 chrX 20377255 intergenic not near genes chrX 20378062 intergenic not near genes chrX 20378868 intergenic not near genes chrX_11_20375001 chrX_20375001 OSS_C 2714 chrX 20504060 20504140 chrX 20505657 20505737 transib2 19 1597 5.5 5.5 5.5 2.9 1677 chrX 20504060 intron RhoGAP19D - chrX 20504898 intron RhoGAP19D - chrX 20505737 intron RhoGAP19D - chrX_19_20500001 chrX_20500001 OSS_C 2724 chrX 20836687 20836744 chrX 20844364 20844422 roo 7 7678 1.0 5.5 3.2 1.7 7735 chrX 20836687 intron shakB - chrX 20840554 intron shakB - chrX 20844422 intron shakB - chrX_7_20840001 chrX_20840001 OSS_C 2725 chrX 20940661 20940751 chrX 20942206 20942298 hobo 9 1545 3.0 2.0 2.5 2.6 1637 chrX 20940661 intergenic not near genes chrX 20941480 intergenic not near genes chrX 20942298 intergenic not near genes chrX_9_20940001 chrX_20940001 OSS_C 2726 chrX 20956912 20956962 chrX 20962432 20962480 I-element 6 5519 3.5 3.0 3.2 1.4 5568 chrX 20956912 intergenic not near genes chrX 20959696 intergenic not near genes chrX 20962480 intergenic Ser6 - chrX_6_20955001 chrX_20955001 OSS_C 2729 chrX 21086086 21086147 chrX 21087191 21087251 jockey 5 1105 5.0 6.0 5.5 0.8 1165 chrX 21086086 intergenic not near genes chrX 21086668 intergenic not near genes chrX 21087251 intergenic not near genes chrX_5_21085001 chrX_21085001 OSS_C 2735 chrX 21458625 21458700 chrX 21464136 21464211 Ivk 8 5511 6.0 6.0 6.0 1.1 5586 chrX 21458625 intergenic not near genes chrX 21461418 intergenic not near genes chrX 21464211 intergenic not near genes chrX_8_21460001 chrX_21460001 OSS_C 2736 chrX 21474376 21474415 chrX 21474817 21474857 1731 6 442 10.0 7.5 8.8 0.6 481 chrX 21474376 intergenic not near genes chrX 21474616 intergenic not near genes chrX 21474857 intergenic not near genes chrX_6_21470001 chrX_21470001 OSS_C 2738 chrX 21595521 21595567 chrX 21598650 21598696 micropia 7 3129 16.0 5.0 10.5 0.6 3175 chrX 21595521 intergenic not near genes chrX 21597108 intergenic not near genes chrX 21598696 intergenic not near genes chrX_7_21595001 chrX_21595001 OSS_C 2740 chrX 22522565 22522588 chrX 22525461 22525484 NOF 4 2896 5.0 2.5 3.8 0.8 2919 chrX 22522565 intron CG17600 + chrX 22524024 intron CG17600 + chrX 22525484 intron CG17600 + chrX_4_22520001 chrX_22520001 OSS_C 2743 chrX 22681411 22681464 chrX 22688943 22688996 HMS-Beagle2 13 7532 14.0 4.0 9.0 1.3 7585 chrX 22681411 intron CR44997 + chrX 22685204 intron CR44997 + chrX 22688996 intron CR44997 + chrX_13_22685001 chrX_22685001 OSS_C 2748 chrX 22987044 22987114 chrX 22989779 22989848 Burdock 9 2734 5.5 3.5 4.5 1.6 2804 chrX 22987044 intron,intron stnA -,stnB - chrX 22988446 intron,intron stnA -,stnB - chrX 22989848 intron,intron stnA -,stnB - chrX_9_22985001 chrX_22985001 OSS_C 2749 chrX 22996253 22996314 chrX 23003563 23003624 roo 5 7310 3.5 6.0 4.8 0.9 7371 chrX 22996253 intron,intron stnA -,stnB - chrX 22999938 intron,intron stnA -,stnB - chrX 23003624 intron,intron stnA -,stnB - chrX_5_22995001 chrX_22995001 OSS_C