SV#	Chr_5p	Chr_coord_5p_start	Chr_coord_5p_end	Chr_3p	Chr_coord_3p_start	Chr_coord_3p_end	repName	Reads_collapsed	avg_del_len	RefGen_3prime	Refgen_5prime	RefGen_Avg	Coverage_Ratio	size	Chr_5p	Chr_coord_5p	classification_5p	comment_5p	Chr_mid	Chr_coord_mid	classification_mid	comment_mid	Chr_3p	Chr_coord_3p	classification_3p	comment_3p	depletion_code	loci_code	libname
1	chr2L	47442	47481	chr2L	52572	52610	jockey	11	5130	9.0	7.0	8.0	1.2	5168	chr2L	47442	intron	Cda5 -	chr2L	50026	intron	Cda5 -	chr2L	52610	intron	Cda5 -	chr2L_11_50001	chr2L_50001	D9
10	chr2L	347867	347913	chr2L	355392	355438	blood	12	7525	2.5	2.5	2.5	3.4	7571	chr2L	347867	3` UTR	Plc21C +	chr2L	351652	intron	Plc21C +	chr2L	355438	3` UTR	Plc21C +	chr2L_12_350001	chr2L_350001	D9
19	chr2L	686917	686930	chr2L	695982	695993	roo	4	9064	8.0	10.0	9.0	0.4	9076	chr2L	686917	intron	ds -	chr2L	691455	intron	ds -	chr2L	695993	intron	ds -	chr2L_4_690001	chr2L_690001	D9
21	chr2L	770447	770491	chr2L	772253	772297	Bari1	31	1805	7.5	10.0	8.8	3.2	1850	chr2L	770447	intergenic	not near genes	chr2L	771372	intergenic	not near genes	chr2L	772297	intergenic	CR44614 +	chr2L_31_770001	chr2L_770001	D9
27	chr2L	976859	976912	chr2L	984518	984573	roo	13	7661	5.0	4.0	4.5	2.4	7714	chr2L	976859	intergenic	not near genes	chr2L	980716	intergenic	not near genes	chr2L	984573	intergenic	not near genes	chr2L_13_980001	chr2L_980001	D9
31	chr2L	1220106	1220156	chr2L	1227597	1227647	blood	22	7490	8.5	1.0	4.8	3.8	7541	chr2L	1220106	intron	CG42329 +	chr2L	1223876	intron	CG42329 +	chr2L	1227647	intron	CG42329 +	chr2L_22_1220001	chr2L_1220001	D9
33	chr2L	1301735	1301779	chr2L	1302299	1302343	gypsy	13	564	5.0	3.0	4.0	2.6	608	chr2L	1301735	intergenic	not near genes	chr2L	1302039	intergenic	not near genes	chr2L	1302343	intergenic	not near genes	chr2L_13_1300001	chr2L_1300001	D9
43	chr2L	1570666	1570717	chr2L	1573563	1573614	F-element	20	2897	5.0	3.0	4.0	4.0	2948	chr2L	1570666	intron	haf +	chr2L	1572140	intron	haf +	chr2L	1573614	intron	haf +	chr2L_20_1570001	chr2L_1570001	D9
50	chr2L	1678934	1679002	chr2L	1686441	1686492	blood	8	7506	0.5	3.5	2.0	2.7	7558	chr2L	1678934	intron	chinmo +	chr2L	1682713	intron	chinmo +	chr2L	1686492	intron	chinmo +	chr2L_8_1680001	chr2L_1680001	D9
51	chr2L	1711336	1711384	chr2L	1711685	1711733	mdg3	24	349	9.5	13.0	11.2	2.0	397	chr2L	1711336	3` UTR,3` UTR	mRpL48 +,frtz -	chr2L	1711534	3` UTR	frtz -	chr2L	1711733	3` UTR	frtz -	chr2L_24_1710001	chr2L_1710001	D9
60	chr2L	2100375	2100407	chr2L	2109551	2109552	roo	21	9163	8.5	12.5	10.5	1.8	9177	chr2L	2100375	intron	dpr3 -	chr2L	2104964	intron	dpr3 -	chr2L	2109552	intron	dpr3 -	chr2L_21_2100001	chr2L_2100001	D9
61	chr2L	2112087	2112145	chr2L	2119774	2119832	opus	34	7686	6.5	9.5	8.0	3.8	7745	chr2L	2112087	intergenic	not near genes	chr2L	2115960	intergenic	not near genes	chr2L	2119832	intergenic	not near genes	chr2L_34_2115001	chr2L_2115001	D9
66	chr2L	2294015	2294075	chr2L	2299245	2299292	copia	27	5229	5.5	6.5	6.0	3.9	5277	chr2L	2294015	intergenic	not near genes	chr2L	2296654	intergenic	not near genes	chr2L	2299292	intergenic	not near genes	chr2L_27_2295001	chr2L_2295001	D9
70	chr2L	2565534	2565560	chr2L	2571630	2571658	297	9	6097	5.0	9.5	7.2	1.1	6124	chr2L	2565534	exon	Cyp309a2 -	chr2L	2568596	intron	Cyp309a2 -	chr2L	2571658	exon	Cyp309a2 -	chr2L_9_2565001	chr2L_2565001	D9
76	chr2L	2661180	2661225	chr2L	2663043	2663088	I-element	11	1859	5.5	13.5	9.5	1.0	1908	chr2L	2661180	intergenic	not near genes	chr2L	2662134	intergenic	not near genes	chr2L	2663088	intergenic	not near genes	chr2L_11_2660001	chr2L_2660001	D9
77	chr2L	2661227	2661229	chr2L	2663036	2663051	I-element	11	1832	5.0	12.0	8.5	1.2	1824	chr2L	2661227	intergenic	not near genes	chr2L	2662139	intergenic	not near genes	chr2L	2663051	intergenic	not near genes	chr2L_11_2660001	chr2L_2660001	D9
80	chr2L	2772590	2772625	chr2L	2779197	2779232	297	10	6604	6.0	9.5	7.8	1.1	6642	chr2L	2772590	3` UTR	Syt1 -	chr2L	2775911	intron	Syt1 -	chr2L	2779232	3` UTR	Syt1 -	chr2L_10_2775001	chr2L_2775001	D9
85	chr2L	3073011	3073055	chr2L	3078237	3078282	copia	24	5226	6.5	4.0	5.2	3.9	5271	chr2L	3073011	intron	toc -	chr2L	3075646	intron	toc -	chr2L	3078282	intron	toc -	chr2L_24_3075001	chr2L_3075001	D9
93	chr2L	3202727	3202764	chr2L	3210181	3210218	mdg1	6	7453	6.0	0.0	3.0	1.5	7491	chr2L	3202727	intergenic	not near genes	chr2L	3206472	intergenic	not near genes	chr2L	3210218	intergenic	CR45336 +	chr2L_6_3205001	chr2L_3205001	D9
95	chr2L	3251473	3251522	chr2L	3259063	3259110	springer	23	7589	4.5	7.0	5.8	3.4	7637	chr2L	3251473	intergenic	not near genes	chr2L	3255292	intergenic	not near genes	chr2L	3259110	intergenic	not near genes	chr2L_23_3255001	chr2L_3255001	D9
102	chr2L	3649770	3649806	chr2L	3654995	3655032	copia	4	5226	0.0	6.5	3.2	1.0	5262	chr2L	3649770	intron	for -	chr2L	3652401	intron	for -	chr2L	3655032	intron	for -	chr2L_4_3650001	chr2L_3650001	D9
111	chr2L	4661819	4661854	chr2L	4669424	4669457	opus	17	7605	5.5	13.0	9.2	1.7	7638	chr2L	4661819	intergenic	not near genes	chr2L	4665638	intergenic	not near genes	chr2L	4669457	intergenic	not near genes	chr2L_17_4665001	chr2L_4665001	D9
123	chr2L	5342761	5342798	chr2L	5345166	5345203	Doc	7	2405	1.0	2.5	1.8	2.5	2442	chr2L	5342761	intergenic	not near genes	chr2L	5343982	intergenic	not near genes	chr2L	5345203	intergenic	not near genes	chr2L_7_5340001	chr2L_5340001	D9
128	chr2L	5827692	5827739	chr2L	5836723	5836772	roo	14	9033	2.5	3.0	2.8	3.7	9080	chr2L	5827692	intron	TrissinR +	chr2L	5832232	intron	TrissinR +	chr2L	5836772	intron	TrissinR +	chr2L_14_5830001	chr2L_5830001	D9
149	chr2L	6279626	6279654	chr2L	6279727	6279758	INE-1	6	103	3.5	0.5	2.0	2.0	132	chr2L	6279626	intron	Ddr +	chr2L	6279692	intron	Ddr +	chr2L	6279758	intron	Ddr +	chr2L_6_6275001	chr2L_6275001	D9
152	chr2L	6363127	6363180	chr2L	6366072	6366131	Burdock	19	2948	6.5	6.5	6.5	2.5	3004	chr2L	6363127	intergenic	not near genes	chr2L	6364629	intergenic	not near genes	chr2L	6366131	intergenic	not near genes	chr2L_19_6360001	chr2L_6360001	D9
154	chr2L	6426828	6426887	chr2L	6445113	6445172	roo	28	18285	6.0	10.0	8.0	3.1	18344	chr2L	6426828	3` UTR	CG9527 -	chr2L	6436000	intron	CG9527 -	chr2L	6445172	exon	CG9527 -	chr2L_28_6435001	chr2L_6435001	D9
170	chr2L	6876770	6876800	chr2L	6882985	6883005	diver	5	6213	5.5	9.0	7.2	0.6	6235	chr2L	6876770	intron	Nlg2 +	chr2L	6879888	intron	Nlg2 +	chr2L	6883005	intron	Nlg2 +	chr2L_5_6875001	chr2L_6875001	D9
174	chr2L	6991390	6991433	chr2L	6998549	6998581	HMS-Beagle	6	7150	0.0	9.0	4.5	1.1	7191	chr2L	6991390	intron	uif -	chr2L	6994986	intron	uif -	chr2L	6998581	intron	uif -	chr2L_6_6990001	chr2L_6990001	D9
185	chr2L	7343302	7343355	chr2L	7350443	7350496	roo	24	7140	8.0	8.0	8.0	2.7	7194	chr2L	7343302	intron	Wnt6 +	chr2L	7346899	intron	Wnt6 +	chr2L	7350496	intron	Wnt6 +	chr2L_24_7345001	chr2L_7345001	D9
195	chr2L	7959016	7959070	chr2L	7960452	7960508	pogo	8	1436	4.0	0.5	2.2	2.5	1492	chr2L	7959016	intron	Snoo -	chr2L	7959762	intron	Snoo -	chr2L	7960508	intron	Snoo -	chr2L_8_7955001	chr2L_7955001	D9
197	chr2L	7977063	7977105	chr2L	7984063	7984105	297	20	7000	9.5	13.0	11.2	1.6	7042	chr2L	7977063	intron	Snoo -	chr2L	7980584	intron	Snoo -	chr2L	7984105	intron,5` UTR	Snoo -,CG7231 +	chr2L_20_7980001	chr2L_7980001	D9
198	chr2L	8018818	8018822	chr2L	8023626	8023631	Doc	4	4809	0.0	5.0	2.5	1.1	4813	chr2L	8018818	intron	Tg +	chr2L	8021224	intron	Tg +	chr2L	8023631	intron	Tg +	chr2L_4_8020001	chr2L_8020001	D9
204	chr2L	8452405	8452445	chr2L	8461601	8461639	roo	19	9195	6.0	6.0	6.0	2.7	9234	chr2L	8452405	intron	fu12 -	chr2L	8457022	intron	fu12 -	chr2L	8461639	intron	fu12 -	chr2L_19_8455001	chr2L_8455001	D9
208	chr2L	8594442	8594494	chr2L	8601521	8601571	297	19	7079	1.5	5.0	3.2	4.5	7129	chr2L	8594442	intron,3` UTR	Sema-1a +,CR43855 -	chr2L	8598006	intron	Sema-1a +	chr2L	8601571	intron	Sema-1a +	chr2L_19_8595001	chr2L_8595001	D9
210	chr2L	8723091	8723145	chr2L	8731493	8731547	Tirant	20	8402	1.5	6.0	3.8	4.2	8456	chr2L	8723091	intron	raw -	chr2L	8727319	intron	raw -	chr2L	8731547	intron	raw -	chr2L_20_8725001	chr2L_8725001	D9
221	chr2L	9000259	9000305	chr2L	9007794	9007840	roo	16	7535	9.0	0.0	4.5	2.9	7581	chr2L	9000259	intergenic	Try29F +	chr2L	9004050	intergenic	not near genes	chr2L	9007840	intergenic	not near genes	chr2L_16_9000001	chr2L_9000001	D9
227	chr2L	9217949	9217994	chr2L	9222761	9222806	Doc	23	4812	6.5	6.0	6.2	3.2	4857	chr2L	9217949	intron	tai +	chr2L	9220378	intron	tai +	chr2L	9222806	intron	tai +	chr2L_23_9220001	chr2L_9220001	D9
237	chr2L	9393488	9393516	chr2L	9396479	9396507	jockey	4	2991	1.0	4.5	2.8	1.1	3019	chr2L	9393488	intron	Shawl -	chr2L	9394998	intron	Shawl -	chr2L	9396507	intron	Shawl -	chr2L_4_9390001	chr2L_9390001	D9
251	chr2L	9973703	9973757	chr2L	9980847	9980901	HMS-Beagle	36	7144	13.5	11.5	12.5	2.7	7198	chr2L	9973703	intergenic	not near genes	chr2L	9977302	intergenic	not near genes	chr2L	9980901	intergenic	not near genes	chr2L_36_9975001	chr2L_9975001	D9
255	chr2L	10138171	10138193	chr2L	10143438	10143458	Rt1c	12	5265	6.5	20.5	13.5	0.8	5287	chr2L	10138171	intron	CG44153 -	chr2L	10140814	intron	CG44153 -	chr2L	10143458	intron	CG44153 -	chr2L_12_10140001	chr2L_10140001	D9
257	chr2L	10156296	10156353	chr2L	10163791	10163848	blood	11	7495	4.0	3.5	3.8	2.3	7552	chr2L	10156296	intron,3` UTR	CG44153 -,CG4839 +	chr2L	10160072	intron	CG44153 -	chr2L	10163848	intron	CG44153 -	chr2L_11_10160001	chr2L_10160001	D9
268	chr2L	10592823	10592867	chr2L	10600510	10600554	opus	12	7686	1.0	3.5	2.2	3.8	7731	chr2L	10592823	intron	Trim9 +	chr2L	10596688	intron	Trim9 +	chr2L	10600554	intron	Trim9 +	chr2L_12_10595001	chr2L_10595001	D9
279	chr2L	10862833	10862866	chr2L	10864468	10864505	Rt1c	18	1637	7.5	10.5	9.0	1.8	1672	chr2L	10862833	3` UTR	CR43807 -	chr2L	10863669	intron	CR43807 -	chr2L	10864505	3` UTR	CR43807 -	chr2L_18_10860001	chr2L_10860001	D9
280	chr2L	10876558	10876568	chr2L	10883637	10883649	297	6	7081	8.0	1.0	4.5	1.1	7091	chr2L	10876558	intergenic	not near genes	chr2L	10880104	intergenic	not near genes	chr2L	10883649	intergenic	not near genes	chr2L_6_10880001	chr2L_10880001	D9
283	chr2L	10946927	10946974	chr2L	10956167	10956214	roo	36	9240	10.0	10.0	10.0	3.3	9287	chr2L	10946927	intron	dpr2 -	chr2L	10951570	intron	dpr2 -	chr2L	10956214	intron	dpr2 -	chr2L_36_10950001	chr2L_10950001	D9
291	chr2L	11315244	11315268	chr2L	11317673	11317697	G2	8	2429	7.0	6.5	6.8	1.0	2453	chr2L	11315244	intergenic	not near genes	chr2L	11316470	intergenic	not near genes	chr2L	11317697	intergenic	not near genes	chr2L_8_11315001	chr2L_11315001	D9
308	chr2L	11563619	11563659	chr2L	11568848	11568888	copia	20	5229	8.5	9.0	8.8	2.0	5269	chr2L	11563619	intergenic	not near genes	chr2L	11566254	intergenic	not near genes	chr2L	11568888	intergenic	not near genes	chr2L_20_11565001	chr2L_11565001	D9
310	chr2L	11614042	11614080	chr2L	11615547	11615600	hopper2	18	1517	4.5	3.5	4.0	3.6	1558	chr2L	11614042	intron	kek2 +	chr2L	11614821	intron	kek2 +	chr2L	11615600	intron	kek2 +	chr2L_18_11610001	chr2L_11610001	D9
314	chr2L	11713482	11713539	chr2L	11720975	11720984	blood	18	7490	8.5	3.5	6.0	2.6	7502	chr2L	11713482	intergenic	not near genes	chr2L	11717233	intergenic	not near genes	chr2L	11720984	intergenic	CR44143 +	chr2L_18_11715001	chr2L_11715001	D9
333	chr2L	12067312	12067353	chr2L	12074388	12074421	297	6	7074	3.0	1.5	2.2	1.9	7109	chr2L	12067312	intergenic	not near genes	chr2L	12070866	intergenic	not near genes	chr2L	12074421	intergenic	not near genes	chr2L_6_12070001	chr2L_12070001	D9
348	chr2L	12558294	12558350	chr2L	12565448	12565504	HMS-Beagle	12	7154	1.5	0.0	0.8	6.7	7210	chr2L	12558294	intergenic	not near genes	chr2L	12561899	intergenic	not near genes	chr2L	12565504	intergenic	not near genes	chr2L_12_12560001	chr2L_12560001	D9
350	chr2L	12728901	12728944	chr2L	12729165	12729207	pogo	14	263	8.5	5.5	7.0	1.8	306	chr2L	12728901	intron	MRP +	chr2L	12729054	intron	MRP +	chr2L	12729207	exon	MRP +	chr2L_14_12725001	chr2L_12725001	D9
351	chr2L	12731038	12731087	chr2L	12735830	12735879	F-element	19	4791	5.0	7.0	6.0	2.7	4841	chr2L	12731038	intron	MRP +	chr2L	12733458	intron	MRP +	chr2L	12735879	intron	MRP +	chr2L_19_12730001	chr2L_12730001	D9
352	chr2L	12739154	12739201	chr2L	12743960	12744004	Doc	33	4806	12.5	13.5	13.0	2.4	4850	chr2L	12739154	exon	MRP +	chr2L	12741579	intron	MRP +	chr2L	12744004	exon	MRP +	chr2L_33_12740001	chr2L_12740001	D9
355	chr2L	12781777	12781814	chr2L	12789252	12789289	Quasimodo	16	7475	9.0	2.5	5.8	2.4	7512	chr2L	12781777	intergenic	not near genes	chr2L	12785533	intergenic	not near genes	chr2L	12789289	intergenic	not near genes	chr2L_16_12785001	chr2L_12785001	D9
356	chr2L	12791587	12791628	chr2L	12795287	12795328	F-element	7	3699	4.5	2.5	3.5	1.6	3741	chr2L	12791587	intergenic	not near genes	chr2L	12793458	intergenic	not near genes	chr2L	12795328	intergenic	not near genes	chr2L_7_12790001	chr2L_12790001	D9
360	chr2L	12861670	12861727	chr2L	12863162	12863219	hobo	29	1492	7.5	5.5	6.5	3.9	1549	chr2L	12861670	intergenic	not near genes	chr2L	12862444	intergenic	not near genes	chr2L	12863219	intergenic	not near genes	chr2L_29_12860001	chr2L_12860001	D9
362	chr2L	12894003	12894050	chr2L	12895495	12895542	hobo	24	1491	9.0	12.0	10.5	2.1	1539	chr2L	12894003	intergenic	not near genes	chr2L	12894772	intergenic	not near genes	chr2L	12895542	intergenic	not near genes	chr2L_24_12890001	chr2L_12890001	D9
364	chr2L	12933829	12933882	chr2L	12941319	12941373	blood	33	7492	10.5	9.0	9.8	3.1	7544	chr2L	12933829	intergenic	not near genes	chr2L	12937601	intergenic	not near genes	chr2L	12941373	intergenic	not near genes	chr2L_33_12935001	chr2L_12935001	D9
375	chr2L	13405627	13405672	chr2L	13410449	13410494	Doc	11	4822	12.5	3.5	8.0	1.2	4867	chr2L	13405627	exon	CG7110 +	chr2L	13408060	intron	CG7110 +	chr2L	13410494	intron	CG7110 +	chr2L_11_13405001	chr2L_13405001	D9
377	chr2L	13449442	13449492	chr2L	13456903	13456953	Quasimodo	22	7460	3.0	10.0	6.5	2.9	7511	chr2L	13449442	intron,5` UTR	CG42784 +,Hsp60D -	chr2L	13453198	intron	CG42784 +	chr2L	13456953	intron	CG42784 +	chr2L_22_13450001	chr2L_13450001	D9
378	chr2L	13481434	13481468	chr2L	13482066	13482100	jockey	20	632	12.0	18.5	15.2	1.2	666	chr2L	13481434	intron	CG42784 +	chr2L	13481767	intron	CG42784 +	chr2L	13482100	intron	CG42784 +	chr2L_20_13480001	chr2L_13480001	D9
379	chr2L	13522265	13522280	chr2L	13527596	13527611	Transpac	4	5330	2.0	5.5	3.8	0.8	5346	chr2L	13522265	intron	B4 -	chr2L	13524938	intron	B4 -	chr2L	13527611	intron	B4 -	chr2L_4_13520001	chr2L_13520001	D9
384	chr2L	13761785	13761813	chr2L	13762921	13762946	Doc	6	1136	8.5	5.0	6.8	0.8	1161	chr2L	13761785	intron	TM9SF4 +	chr2L	13762366	intron	TM9SF4 +	chr2L	13762946	intron	TM9SF4 +	chr2L_6_13760001	chr2L_13760001	D9
386	chr2L	13853068	13853110	chr2L	13862243	13862285	roo	13	9175	6.5	0.0	3.2	3.1	9217	chr2L	13853068	intron	CenG1A +	chr2L	13857676	intron	CenG1A +	chr2L	13862285	intron	CenG1A +	chr2L_13_13855001	chr2L_13855001	D9
403	chr2L	14642550	14642596	chr2L	14651738	14651784	roo	16	9188	8.5	6.5	7.5	1.9	9234	chr2L	14642550	intron	osp -	chr2L	14647167	intron	osp -	chr2L	14651784	intron	osp -	chr2L_16_14645001	chr2L_14645001	D9
406	chr2L	14803854	14803907	chr2L	14809082	14809132	copia	19	5228	5.5	4.5	5.0	3.2	5278	chr2L	14803854	intergenic	not near genes	chr2L	14806493	intergenic	not near genes	chr2L	14809132	intergenic	not near genes	chr2L_19_14805001	chr2L_14805001	D9
410	chr2L	14889927	14889960	chr2L	14890377	14890410	jockey	12	450	10.5	3.0	6.8	1.5	483	chr2L	14889927	intergenic	not near genes	chr2L	14890168	intergenic	not near genes	chr2L	14890410	intergenic	not near genes	chr2L_12_14890001	chr2L_14890001	D9
429	chr2L	15446026	15446070	chr2L	15453520	15453564	blood	13	7494	4.0	3.0	3.5	2.9	7538	chr2L	15446026	intergenic	not near genes	chr2L	15449795	intergenic	not near genes	chr2L	15453564	intergenic	not near genes	chr2L_13_15445001	chr2L_15445001	D9
434	chr2L	15586387	15586439	chr2L	15593463	15593516	297	14	7077	1.5	6.0	3.8	2.9	7129	chr2L	15586387	intergenic	not near genes	chr2L	15589952	intergenic	not near genes	chr2L	15593516	intergenic	not near genes	chr2L_14_15585001	chr2L_15585001	D9
438	chr2L	15773547	15773581	chr2L	15773653	15773687	INE-1	13	106	1.5	3.0	2.2	4.1	140	chr2L	15773547	intergenic	CG31826 -	chr2L	15773617	intergenic	not near genes	chr2L	15773687	intergenic	not near genes	chr2L_13_15770001	chr2L_15770001	D9
443	chr2L	15955998	15956044	chr2L	15957490	15957536	hobo	14	1491	9.5	4.0	6.8	1.8	1538	chr2L	15955998	intron	beat-Ib -	chr2L	15956767	intron	beat-Ib -	chr2L	15957536	intron	beat-Ib -	chr2L_14_15955001	chr2L_15955001	D9
449	chr2L	16071771	16071771	chr2L	16217660	16217661	copia	72	145889	38.0	24.0	31.0	2.2	145890	chr2L	16071771	intron	beat-Ia +	chr2L	16144716	intergenic	not near genes	chr2L	16217661	intergenic	not near genes	chr2L_72_16140001	chr2L_16140001	D9
450	chr2L	16141148	16141192	chr2L	16146380	16146423	copia	9	5232	3.0	6.0	4.5	1.6	5275	chr2L	16141148	intergenic	not near genes	chr2L	16143786	intergenic	not near genes	chr2L	16146423	intergenic	not near genes	chr2L_9_16140001	chr2L_16140001	D9
451	chr2L	16153710	16153745	chr2L	16160789	16160824	297	22	7079	12.0	5.5	8.8	2.2	7114	chr2L	16153710	intergenic	not near genes	chr2L	16157267	intergenic	not near genes	chr2L	16160824	intergenic	not near genes	chr2L_22_16155001	chr2L_16155001	D9
455	chr2L	16071770	16071771	chr2L	16217660	16217660	copia	49	145889	38.0	24.0	31.0	1.5	145890	chr2L	16071770	intron	beat-Ia +	chr2L	16144715	intergenic	not near genes	chr2L	16217660	intergenic	not near genes	chr2L_49_16140001	chr2L_16140001	D9
458	chr2L	16280234	16280284	chr2L	16281430	16281480	1360	34	1195	8.5	12.0	10.2	3.0	1246	chr2L	16280234	intron	crp -	chr2L	16280857	intron	crp -	chr2L	16281480	intron	crp -	chr2L_34_16280001	chr2L_16280001	D9
464	chr2L	16511965	16511991	chr2L	16519117	16519143	HMS-Beagle	5	7152	3.5	1.5	2.5	1.4	7178	chr2L	16511965	intron	CG5953 -	chr2L	16515554	intron	CG5953 -	chr2L	16519143	intron	CG5953 -	chr2L_5_16515001	chr2L_16515001	D9
476	chr2L	16958091	16958118	chr2L	16962904	16962931	Doc	8	4813	0.5	2.5	1.5	3.2	4840	chr2L	16958091	intergenic	not near genes	chr2L	16960511	intergenic	not near genes	chr2L	16962931	intergenic	not near genes	chr2L_8_16960001	chr2L_16960001	D9
487	chr2L	17167540	17167591	chr2L	17167806	17167857	pogo	14	266	2.5	5.0	3.8	2.9	317	chr2L	17167540	intron,intron	CG34106 +,beat-IIIa +	chr2L	17167698	intron,intron	CG34106 +,beat-IIIa +	chr2L	17167857	intron,intron	CG34106 +,beat-IIIa +	chr2L_14_17165001	chr2L_17165001	D9
489	chr2L	17199144	17199164	chr2L	17200634	17200656	hobo	4	1492	4.5	2.0	3.2	1.0	1512	chr2L	17199144	intron	beat-IIIc -	chr2L	17199900	intron	beat-IIIc -	chr2L	17200656	intron	beat-IIIc -	chr2L_4_17195001	chr2L_17195001	D9
491	chr2L	17273171	17273218	chr2L	17277979	17278025	F-element	23	4808	6.0	6.5	6.2	3.2	4854	chr2L	17273171	intergenic	not near genes	chr2L	17275598	intergenic	not near genes	chr2L	17278025	intergenic	not near genes	chr2L_23_17275001	chr2L_17275001	D9
499	chr2L	17687492	17687523	chr2L	17692262	17692293	F-element	13	4770	4.0	4.0	4.0	2.6	4801	chr2L	17687492	intron	CadN -	chr2L	17689892	intron	CadN -	chr2L	17692293	intron	CadN -	chr2L_13_17685001	chr2L_17685001	D9
501	chr2L	17727854	17727872	chr2L	17729345	17729364	hobo	6	1492	4.5	8.0	6.2	0.8	1510	chr2L	17727854	intron	CadN -	chr2L	17728609	intron	CadN -	chr2L	17729364	intron	CadN -	chr2L_6_17725001	chr2L_17725001	D9
503	chr2L	17819901	17819951	chr2L	17825129	17825179	copia	8	5228	5.0	5.0	5.0	1.3	5278	chr2L	17819901	intron	CadN2 -	chr2L	17822540	intron	CadN2 -	chr2L	17825179	intron	CadN2 -	chr2L_8_17820001	chr2L_17820001	D9
505	chr2L	17911940	17911986	chr2L	17914142	17914197	pogo	15	2210	6.0	5.0	5.5	2.3	2257	chr2L	17911940	intergenic	not near genes	chr2L	17913068	intergenic	not near genes	chr2L	17914197	intergenic	CG43271 -	chr2L_15_17910001	chr2L_17910001	D9
507	chr2L	17951931	17951971	chr2L	17953423	17953463	hobo	11	1492	5.0	6.0	5.5	1.7	1532	chr2L	17951931	intergenic	CR44398 -,CR44397 -	chr2L	17952697	intergenic	not near genes	chr2L	17953463	intergenic	not near genes	chr2L_11_17950001	chr2L_17950001	D9
514	chr2L	18051866	18051905	chr2L	18061038	18061077	roo	15	9172	4.0	11.5	7.8	1.7	9211	chr2L	18051866	intron	rdo +	chr2L	18056472	intron	rdo +	chr2L	18061077	intron	rdo +	chr2L_15_18055001	chr2L_18055001	D9
526	chr2L	18408015	18408052	chr2L	18412824	18412859	Doc	9	4808	4.0	8.0	6.0	1.3	4844	chr2L	18408015	intergenic	not near genes	chr2L	18410437	intergenic	not near genes	chr2L	18412859	intergenic	not near genes	chr2L_9_18410001	chr2L_18410001	D9
541	chr2L	19147345	19147389	chr2L	19154405	19154448	297	18	7060	5.5	5.0	5.2	2.9	7103	chr2L	19147345	intron	brat +	chr2L	19150896	intron	brat +	chr2L	19154448	intron	brat +	chr2L_18_19150001	chr2L_19150001	D9
546	chr2L	19344998	19345037	chr2L	19357229	19357271	blood	10	12234	5.5	5.0	5.2	1.6	12273	chr2L	19344998	intron	dnt -	chr2L	19351134	intron	dnt -	chr2L	19357271	intron	dnt -	chr2L_10_19350001	chr2L_19350001	D9
558	chr2L	19620075	19620128	chr2L	19621084	19621142	jockey	16	1014	6.5	5.0	5.8	2.4	1067	chr2L	19620075	intron	Lar +	chr2L	19620608	intron	Lar +	chr2L	19621142	intron	Lar +	chr2L_16_19620001	chr2L_19620001	D9
559	chr2L	19652547	19652577	chr2L	19674008	19674038	opus	5	21461	4.5	1.5	3.0	1.2	21491	chr2L	19652547	intron	Lar +	chr2L	19663292	intron	Lar +	chr2L	19674038	intron	Lar +	chr2L_5_19660001	chr2L_19660001	D9
561	chr2L	19703518	19703565	chr2L	19712679	19712723	roo	8	9161	2.5	9.5	6.0	1.1	9205	chr2L	19703518	intron	Lar +	chr2L	19708120	intron	Lar +	chr2L	19712723	intron	Lar +	chr2L_8_19705001	chr2L_19705001	D9
562	chr2L	19737334	19737386	chr2L	19740828	19740837	1360	19	3491	4.5	9.0	6.8	2.4	3503	chr2L	19737334	intergenic	Nf-YB +	chr2L	19739086	intergenic	not near genes	chr2L	19740837	intergenic	not near genes	chr2L_19_19735001	chr2L_19735001	D9
564	chr2L	19762785	19762828	chr2L	19763052	19763095	pogo	8	267	6.0	5.0	5.5	1.2	310	chr2L	19762785	exon	fbp -	chr2L	19762940	intron	fbp -	chr2L	19763095	intron	fbp -	chr2L_8_19760001	chr2L_19760001	D9
568	chr2L	20005850	20005898	chr2L	20010950	20010999	flea	10	5101	3.0	2.0	2.5	2.9	5149	chr2L	20005850	intron	CG43861 -	chr2L	20008424	intron	CG43861 -	chr2L	20010999	intron	CG43861 -	chr2L_10_20005001	chr2L_20005001	D9
569	chr2L	20272090	20272139	chr2L	20282826	20282875	copia	21	10736	7.5	9.5	8.5	2.2	10785	chr2L	20272090	intergenic	not near genes	chr2L	20277482	intergenic	not near genes	chr2L	20282875	intergenic	not near genes	chr2L_21_20275001	chr2L_20275001	D9
574	chr2L	20372202	20372245	chr2L	20372468	20372511	pogo	19	266	0.0	5.0	2.5	5.4	309	chr2L	20372202	intergenic	Ugt37a1 -	chr2L	20372356	intergenic	Ugt37a1 -	chr2L	20372511	exon	Ugt37a1 -	chr2L_19_20370001	chr2L_20370001	D9
578	chr2L	20568635	20568686	chr2L	20569050	20569101	X-element	25	415	4.5	4.0	4.2	4.8	466	chr2L	20568635	intron	CR45347 +	chr2L	20568868	intron	CR45347 +	chr2L	20569101	intron	CR45347 +	chr2L_25_20565001	chr2L_20565001	D9
579	chr2L	20576199	20576247	chr2L	20583692	20583741	blood	12	7493	1.5	4.0	2.8	3.2	7542	chr2L	20576199	intergenic	CR45347 +	chr2L	20579970	intergenic	not near genes	chr2L	20583741	3` UTR	CR44909 -	chr2L_12_20575001	chr2L_20575001	D9
582	chr2L	20639479	20639529	chr2L	20639780	20639830	INE-1	9	301	9.0	16.5	12.8	0.7	351	chr2L	20639479	intergenic	not near genes	chr2L	20639654	intergenic	CG31680 +	chr2L	20639830	intergenic	CG31680 +	chr2L_9_20635001	chr2L_20635001	D9
592	chr2L	20835784	20835840	chr2L	20836526	20836582	Quasimodo	8	742	9.5	10.5	10.0	0.7	798	chr2L	20835784	5` UTR	Oseg5 -	chr2L	20836183	intergenic	Oseg5 -,Spn38F -	chr2L	20836582	intergenic	Spn38F -	chr2L_8_20835001	chr2L_20835001	D9
594	chr2L	20891515	20891529	chr2L	20896641	20896655	jockey	5	5126	5.0	4.5	4.8	0.9	5140	chr2L	20891515	intron,intron	CG43739 -,sky -	chr2L	20894085	intron,intron	CG43739 -,sky -	chr2L	20896655	intron,intron	CG43739 -,sky -	chr2L_5_20890001	chr2L_20890001	D9
595	chr2L	20901431	20901479	chr2L	20902620	20902668	1360	11	1188	12.0	3.0	7.5	1.3	1237	chr2L	20901431	intron,intron	CG43739 -,sky -	chr2L	20902050	intron,intron	CG43739 -,sky -	chr2L	20902668	intron,intron	CG43739 -,sky -	chr2L_11_20900001	chr2L_20900001	D9
600	chr2L	20976630	20976668	chr2L	20981470	20981508	X-element	8	4840	4.5	8.5	6.5	1.1	4878	chr2L	20976630	intron	CG42238 -	chr2L	20979069	intron	CG42238 -	chr2L	20981508	intron	CG42238 -	chr2L_8_20975001	chr2L_20975001	D9
603	chr2L	21020253	21020303	chr2L	21023955	21024005	NOF	27	3702	7.0	11.0	9.0	2.7	3752	chr2L	21020253	intron	CG42238 -	chr2L	21022129	intron	CG42238 -	chr2L	21024005	intron	CG42238 -	chr2L_27_21020001	chr2L_21020001	D9
604	chr2L	21041114	21041167	chr2L	21049400	21049453	Tirant	7	8285	2.0	4.0	3.0	1.8	8339	chr2L	21041114	intron	CG42238 -	chr2L	21045284	intron	CG42238 -	chr2L	21049453	intron	CG42238 -	chr2L_7_21045001	chr2L_21045001	D9
611	chr2L	21347538	21347578	chr2L	21355035	21355074	blood	6	7497	2.5	3.0	2.8	1.6	7536	chr2L	21347538	intron	Tsp39D +	chr2L	21351306	intron	Tsp39D +	chr2L	21355074	intron	Tsp39D +	chr2L_6_21350001	chr2L_21350001	D9
614	chr2L	21597026	21597058	chr2L	21604794	21604827	roo	5	7769	2.0	3.5	2.8	1.3	7801	chr2L	21597026	intergenic	not near genes	chr2L	21600926	intergenic	not near genes	chr2L	21604827	intergenic	not near genes	chr2L_5_21600001	chr2L_21600001	D9
616	chr2L	21691808	21691832	chr2L	21698301	21698327	Burdock	5	6495	4.5	0.5	2.5	1.4	6519	chr2L	21691808	intron	CG31619 +	chr2L	21695068	intron	CG31619 +	chr2L	21698327	intron	CG31619 +	chr2L_5_21695001	chr2L_21695001	D9
625	chr2L	21902491	21902500	chr2L	21902591	21902602	INE-1	5	102	0.5	6.5	3.5	1.1	111	chr2L	21902491	intergenic	not near genes	chr2L	21902546	intergenic	CG1421 +	chr2L	21902602	intergenic	CG1421 +	chr2L_5_21900001	chr2L_21900001	D9
631	chr2L	21981663	21981707	chr2L	21990853	21990897	roo	13	9190	7.0	13.0	10.0	1.2	9234	chr2L	21981663	exon	CG2528 -	chr2L	21986280	intron	CG2528 -	chr2L	21990897	exon	CG2528 -	chr2L_13_21985001	chr2L_21985001	D9
642	chr2L	22258601	22258643	chr2L	22260748	22260792	G6	16	2149	2.5	7.0	4.8	2.8	2191	chr2L	22258601	intergenic	Tif-IA +	chr2L	22259696	intergenic	not near genes	chr2L	22260792	intergenic	not near genes	chr2L_16_22255001	chr2L_22255001	D9
644	chr2L	22341268	22341297	chr2L	22341488	22341517	G-element	13	220	26.5	26.5	26.5	0.5	249	chr2L	22341268	intron	CG17018 +	chr2L	22341392	intron	CG17018 +	chr2L	22341517	intron	CG17018 +	chr2L_13_22340001	chr2L_22340001	D9
645	chr2L	22581959	22581998	chr2L	22583773	22583812	S-element	7	1813	4.0	4.5	4.2	1.3	1853	chr2L	22581959	intron	CG17494 +	chr2L	22582886	intron	CG17494 +	chr2L	22583812	intron	CG17494 +	chr2L_7_22580001	chr2L_22580001	D9
646	chr2L	22679800	22679821	chr2L	22684597	22684618	F-element	8	4797	3.5	6.5	5.0	1.3	4818	chr2L	22679800	intron	CG40006 -	chr2L	22682209	intron	CG40006 -	chr2L	22684618	intron	CG40006 -	chr2L_8_22680001	chr2L_22680001	D9
648	chr2L	22776396	22776444	chr2L	22778210	22778258	S-element	6	1814	2.5	2.5	2.5	1.7	1862	chr2L	22776396	intergenic	not near genes	chr2L	22777327	intergenic	not near genes	chr2L	22778258	intergenic	not near genes	chr2L_6_22775001	chr2L_22775001	D9
651	chr2R	469951	469974	chr2R	473217	473226	F-element	4	3262	3.5	5.5	4.5	0.7	3275	chr2R	469951	intergenic	not near genes	chr2R	471588	intergenic	not near genes	chr2R	473226	intergenic	not near genes	chr2R_4_470001	chr2R_470001	D9
652	chr2R	529317	529352	chr2R	537967	538002	Max-element	14	8650	5.0	6.5	5.8	2.1	8685	chr2R	529317	intron	CG40378 +	chr2R	533660	intron	CG40378 +	chr2R	538002	intron	CG40378 +	chr2R_14_530001	chr2R_530001	D9
653	chr2R	552729	552778	chr2R	553969	554021	1360	18	1235	12.5	13.0	12.8	1.3	1292	chr2R	552729	intron	CG40378 +	chr2R	553375	intron	CG40378 +	chr2R	554021	intron	CG40378 +	chr2R_18_550001	chr2R_550001	D9
655	chr2R	1082370	1082382	chr2R	1087151	1087180	Doc	5	4796	8.0	19.0	13.5	0.3	4810	chr2R	1082370	intron	rl +	chr2R	1084775	intron	rl +	chr2R	1087180	intron	rl +	chr2R_5_1080001	chr2R_1080001	D9
657	chr2R	1516583	1516603	chr2R	1521336	1521356	1731	14	4752	20.0	19.0	19.5	0.7	4773	chr2R	1516583	exon	Maf1 -	chr2R	1518970	intron	Maf1 -	chr2R	1521356	5` UTR	Maf1 -	chr2R_14_1515001	chr2R_1515001	D9
660	chr2R	2498962	2499014	chr2R	2508134	2508184	roo	7	9171	3.5	2.5	3.0	1.8	9222	chr2R	2498962	intron	MFS17 -	chr2R	2503573	intron	MFS17 -	chr2R	2508184	intron	MFS17 -	chr2R_7_2500001	chr2R_2500001	D9
664	chr2R	3144060	3144110	chr2R	3393363	3393410	Doc	6	249302	12.0	14.0	13.0	0.4	249350	chr2R	3144060	intron	CG42596 +	chr2R	3268735	intergenic	not near genes	chr2R	3393410	intergenic	not near genes	chr2R_6_3265001	chr2R_3265001	D9
667	chr2R	3532607	3532639	chr2R	3536075	3536107	Doc	6	3468	1.0	3.0	2.0	2.0	3500	chr2R	3532607	intergenic	not near genes	chr2R	3534357	intergenic	not near genes	chr2R	3536107	intergenic	not near genes	chr2R_6_3530001	chr2R_3530001	D9
669	chr2R	4622936	4622980	chr2R	4624111	4624164	1360	6	1182	13.0	9.0	11.0	0.5	1228	chr2R	4622936	intergenic	CR44101 -	chr2R	4623550	intergenic	not near genes	chr2R	4624164	intergenic	not near genes	chr2R_6_4620001	chr2R_4620001	D9
670	chr2R	4750328	4750364	chr2R	4751509	4751546	1360	5	1181	4.5	7.5	6.0	0.7	1218	chr2R	4750328	intron	conu +	chr2R	4750937	intron	conu +	chr2R	4751546	intron	conu +	chr2R_5_4750001	chr2R_4750001	D9
673	chr2R	4838860	4838901	chr2R	4840408	4840449	transib2	11	1548	4.5	3.0	3.8	2.3	1589	chr2R	4838860	intergenic	not near genes	chr2R	4839654	intergenic	not near genes	chr2R	4840449	intergenic	not near genes	chr2R_11_4835001	chr2R_4835001	D9
690	chr2R	5417975	5418015	chr2R	5420632	5420672	Burdock	7	2657	2.5	2.5	2.5	2.0	2697	chr2R	5417975	intron	laccase2 +	chr2R	5419324	intron	laccase2 +	chr2R	5420672	intron	laccase2 +	chr2R_7_5415001	chr2R_5415001	D9
710	chr2R	5902136	5902187	chr2R	5909720	5909771	17.6	6	7584	2.5	1.5	2.0	2.0	7635	chr2R	5902136	intron	CG43366 +	chr2R	5905954	intron	CG43366 +	chr2R	5909771	intron	CG43366 +	chr2R_6_5905001	chr2R_5905001	D9
712	chr2R	6096698	6096750	chr2R	6101921	6101960	BS	30	5222	5.0	10.0	7.5	3.5	5262	chr2R	6096698	intron	EcR -	chr2R	6099329	intron	EcR -	chr2R	6101960	intron	EcR -	chr2R_30_6095001	chr2R_6095001	D9
717	chr2R	6494505	6494548	chr2R	6499292	6499333	F-element	15	4786	9.0	2.0	5.5	2.3	4828	chr2R	6494505	intergenic	not near genes	chr2R	6496919	intergenic	not near genes	chr2R	6499333	intergenic	not near genes	chr2R_15_6495001	chr2R_6495001	D9
722	chr2R	6579752	6579806	chr2R	6584863	6584918	flea	9	5111	1.5	2.5	2.0	3.0	5166	chr2R	6579752	intron	jing +	chr2R	6582335	intron	jing +	chr2R	6584918	intron	jing +	chr2R_9_6580001	chr2R_6580001	D9
732	chr2R	7139945	7139949	chr2R	7141462	7141466	hopper2	4	1517	6.5	20.0	13.2	0.3	1521	chr2R	7139945	intergenic	not near genes	chr2R	7140706	intergenic	not near genes	chr2R	7141466	intergenic	not near genes	chr2R_4_7140001	chr2R_7140001	D9
735	chr2R	7235798	7235847	chr2R	7240915	7240964	jockey	15	5117	3.0	2.0	2.5	4.3	5166	chr2R	7235798	intergenic	not near genes	chr2R	7238381	intergenic	not near genes	chr2R	7240964	intergenic	not near genes	chr2R_15_7235001	chr2R_7235001	D9
741	chr2R	7434882	7434911	chr2R	7439208	7439235	Juan	9	4324	3.5	7.0	5.2	1.5	4353	chr2R	7434882	intergenic	so +	chr2R	7437058	intergenic	not near genes	chr2R	7439235	intergenic	not near genes	chr2R_9_7435001	chr2R_7435001	D9
744	chr2R	7608387	7608442	chr2R	7613615	7613669	I-element	8	5228	1.0	0.5	0.8	4.4	5282	chr2R	7608387	intron	CG1358 -	chr2R	7611028	intron	CG1358 -	chr2R	7613669	intron	CG1358 -	chr2R_8_7610001	chr2R_7610001	D9
751	chr2R	7815651	7815698	chr2R	7822145	7822192	Burdock	10	6494	5.0	5.5	5.2	1.6	6541	chr2R	7815651	intergenic	CG1882 +	chr2R	7818922	intergenic	not near genes	chr2R	7822192	3` UTR	cathD -	chr2R_10_7815001	chr2R_7815001	D9
753	chr2R	7862210	7862250	chr2R	7867347	7867388	flea	7	5137	13.5	2.0	7.8	0.8	5178	chr2R	7862210	intron	Dgk -	chr2R	7864799	intron	Dgk -	chr2R	7867388	intron	Dgk -	chr2R_7_7860001	chr2R_7860001	D9
754	chr2R	7869177	7869206	chr2R	7873986	7874017	Doc	7	4811	5.5	5.5	5.5	1.1	4840	chr2R	7869177	intron	Dgk -	chr2R	7871597	intron	Dgk -	chr2R	7874017	intron	Dgk -	chr2R_7_7870001	chr2R_7870001	D9
767	chr2R	8160909	8160949	chr2R	8161024	8161064	1360	13	115	20.5	25.5	23.0	0.5	155	chr2R	8160909	exon	CG8708 -	chr2R	8160986	intron	CG8708 -	chr2R	8161064	intron	CG8708 -	chr2R_13_8160001	chr2R_8160001	D9
770	chr2R	8330840	8330888	chr2R	8331351	8331399	roo	18	510	6.5	3.5	5.0	3.0	559	chr2R	8330840	intron	pdm3 +	chr2R	8331120	intron	pdm3 +	chr2R	8331399	intron	pdm3 +	chr2R_18_8330001	chr2R_8330001	D9
771	chr2R	8398190	8398241	chr2R	8402996	8403047	Doc	21	4805	8.0	7.5	7.8	2.4	4857	chr2R	8398190	intron	CG2121 -	chr2R	8400618	intron	CG2121 -	chr2R	8403047	intron	CG2121 -	chr2R_21_8400001	chr2R_8400001	D9
776	chr2R	8722746	8722793	chr2R	8723012	8723059	pogo	16	264	5.5	8.0	6.8	2.1	313	chr2R	8722746	intron	CG14767 -	chr2R	8722902	intron	CG14767 -	chr2R	8723059	intron	CG14767 -	chr2R_16_8720001	chr2R_8720001	D9
779	chr2R	8777899	8777940	chr2R	8784128	8784169	diver	4	6229	1.5	3.0	2.2	1.2	6270	chr2R	8777899	intergenic	not near genes	chr2R	8781034	intergenic	not near genes	chr2R	8784169	intergenic	not near genes	chr2R_4_8780001	chr2R_8780001	D9
787	chr2R	9151279	9151332	chr2R	9157774	9157827	Burdock	21	6495	5.5	4.0	4.8	3.6	6548	chr2R	9151279	exon	CG30345 +	chr2R	9154553	intergenic	not near genes	chr2R	9157827	intergenic	CG8008 -	chr2R_21_9150001	chr2R_9150001	D9
789	chr2R	9212672	9212720	chr2R	9213183	9213231	roo	35	510	8.5	12.0	10.2	3.1	559	chr2R	9212672	intergenic	CR45309 +	chr2R	9212952	intergenic	CR45309 +	chr2R	9213231	5` UTR	CR45309 +	chr2R_35_9210001	chr2R_9210001	D9
800	chr2R	9480059	9480101	chr2R	9490615	9490655	roo	5	10556	3.5	3.5	3.5	1.1	10596	chr2R	9480059	intergenic	not near genes	chr2R	9485357	intergenic	not near genes	chr2R	9490655	intergenic	not near genes	chr2R_5_9485001	chr2R_9485001	D9
810	chr2R	9726605	9726632	chr2R	9734168	9734208	17.6	8	7574	6.0	2.5	4.2	1.5	7603	chr2R	9726605	intron	sqa -	chr2R	9730406	intron	sqa -	chr2R	9734208	intron	sqa -	chr2R_8_9730001	chr2R_9730001	D9
812	chr2R	9871022	9871066	chr2R	9871533	9871577	roo	13	510	2.0	4.0	3.0	3.2	555	chr2R	9871022	intron	cbx -	chr2R	9871300	intron	cbx -	chr2R	9871577	intron,5` UTR	cbx -,CG18446 +	chr2R_13_9870001	chr2R_9870001	D9
813	chr2R	9945418	9945464	chr2R	9945639	9945685	BS	14	221	1.5	8.0	4.8	2.4	267	chr2R	9945418	intron	Mef2 -	chr2R	9945552	intron	Mef2 -	chr2R	9945685	intron	Mef2 -	chr2R_14_9945001	chr2R_9945001	D9
816	chr2R	10005828	10005884	chr2R	10007018	10007036	1360	19	1186	3.5	9.0	6.2	2.6	1208	chr2R	10005828	intron	Pka-R2 -	chr2R	10006432	intron	Pka-R2 -	chr2R	10007036	intron	Pka-R2 -	chr2R_19_10005001	chr2R_10005001	D9
823	chr2R	10176861	10176912	chr2R	10186053	10186104	roo	7	9192	2.0	3.0	2.5	2.0	9243	chr2R	10176861	intron	KCNQ -	chr2R	10181482	intron	KCNQ -	chr2R	10186104	intron	KCNQ -	chr2R_7_10180001	chr2R_10180001	D9
842	chr2R	10585574	10585585	chr2R	10594181	10594193	Tirant	5	8607	4.0	16.0	10.0	0.5	8619	chr2R	10585574	intron	psq +	chr2R	10589884	intron	psq +	chr2R	10594193	intron	psq +	chr2R_5_10585001	chr2R_10585001	D9
843	chr2R	10622329	10622337	chr2R	10637117	10637127	mdg1	4	14789	2.5	2.0	2.2	1.2	14798	chr2R	10622329	intron	CG11883 +	chr2R	10629728	intron	CG11883 +	chr2R	10637127	intron	CG11883 +	chr2R_4_10625001	chr2R_10625001	D9
851	chr2R	10948022	10948057	chr2R	10955598	10955633	17.6	8	7576	3.5	18.5	11.0	0.7	7611	chr2R	10948022	intergenic	not near genes	chr2R	10951828	intergenic	not near genes	chr2R	10955633	intergenic	not near genes	chr2R_8_10950001	chr2R_10950001	D9
854	chr2R	10979652	10979686	chr2R	10980147	10980179	297	4	494	0.5	5.5	3.0	1.0	527	chr2R	10979652	intergenic	not near genes	chr2R	10979916	intergenic	not near genes	chr2R	10980179	intergenic	not near genes	chr2R_4_10975001	chr2R_10975001	D9
855	chr2R	11009790	11009848	chr2R	11018986	11019045	roo	10	9198	2.5	2.0	2.2	3.1	9255	chr2R	11009790	intron	luna -	chr2R	11014418	intron	luna -	chr2R	11019045	intron	luna -	chr2R_10_11010001	chr2R_11010001	D9
856	chr2R	11019861	11019905	chr2R	11024950	11024996	jockey	22	5090	8.0	6.5	7.2	2.7	5135	chr2R	11019861	intron	luna -	chr2R	11022428	intron	luna -	chr2R	11024996	intron	luna -	chr2R_22_11020001	chr2R_11020001	D9
858	chr2R	11134092	11134142	chr2R	11134358	11134407	pogo	8	266	1.5	2.5	2.0	2.7	315	chr2R	11134092	intergenic	not near genes	chr2R	11134250	intergenic	not near genes	chr2R	11134407	intergenic	not near genes	chr2R_8_11130001	chr2R_11130001	D9
860	chr2R	11207794	11207843	chr2R	11208011	11208060	BS	21	217	4.5	6.5	5.5	3.2	266	chr2R	11207794	intron	shn +	chr2R	11207927	intron	shn +	chr2R	11208060	intron	shn +	chr2R_21_11205001	chr2R_11205001	D9
864	chr2R	11297621	11297649	chr2R	11301967	11301995	flea	6	4346	1.5	0.0	0.8	3.3	4374	chr2R	11297621	intergenic	CG42336 -	chr2R	11299808	intergenic	not near genes	chr2R	11301995	5` UTR	CG7741 +	chr2R_6_11295001	chr2R_11295001	D9
865	chr2R	11415491	11415545	chr2R	11418665	11418719	opus	11	3173	2.0	2.0	2.0	3.7	3228	chr2R	11415491	intron	Drip -	chr2R	11417105	intron	Drip -	chr2R	11418719	intron	Drip -	chr2R_11_11415001	chr2R_11415001	D9
866	chr2R	11472624	11472679	chr2R	11473846	11473901	pogo	18	1222	5.0	3.0	4.0	3.6	1277	chr2R	11472624	intergenic	not near genes	chr2R	11473262	intergenic	not near genes	chr2R	11473901	intergenic	not near genes	chr2R_18_11470001	chr2R_11470001	D9
883	chr2R	12481138	12481165	chr2R	12482965	12482993	roo	16	1828	9.5	13.5	11.5	1.3	1855	chr2R	12481138	exon	Dh44-R2 +	chr2R	12482066	intron	Dh44-R2 +	chr2R	12482993	intron	Dh44-R2 +	chr2R_16_12480001	chr2R_12480001	D9
884	chr2R	12501667	12501721	chr2R	12503854	12503904	Rt1c	18	2185	6.5	8.0	7.2	2.2	2237	chr2R	12501667	intron	fdl -	chr2R	12502786	intron	fdl -	chr2R	12503904	intron	fdl -	chr2R_18_12500001	chr2R_12500001	D9
893	chr2R	12707509	12707529	chr2R	12715900	12715920	roo	5	8391	3.0	3.0	3.0	1.2	8411	chr2R	12707509	intron	CG42663 +	chr2R	12711714	intron	CG42663 +	chr2R	12715920	intron	CG42663 +	chr2R_5_12710001	chr2R_12710001	D9
899	chr2R	12789268	12789326	chr2R	12797656	12797712	roo	25	8387	3.0	2.0	2.5	7.1	8444	chr2R	12789268	intron,3` UTR	sca +,CR45137 -	chr2R	12793490	intron,intron	sca +,CR45137 -	chr2R	12797712	intron,3` UTR	sca +,CR45137 -	chr2R_25_12790001	chr2R_12790001	D9
900	chr2R	12819441	12819479	chr2R	12824531	12824567	jockey	4	5089	14.0	15.0	14.5	0.3	5126	chr2R	12819441	intergenic	not near genes	chr2R	12822004	intergenic	not near genes	chr2R	12824567	intergenic	not near genes	chr2R_4_12820001	chr2R_12820001	D9
903	chr2R	13136819	13136861	chr2R	13141642	13141684	Doc	19	4823	8.5	6.5	7.5	2.2	4865	chr2R	13136819	exon	Cap-G +	chr2R	13139252	intron	Cap-G +	chr2R	13141684	intron	Cap-G +	chr2R_19_13135001	chr2R_13135001	D9
913	chr2R	13580479	13580526	chr2R	13580850	13580900	jockey	17	374	4.5	7.5	6.0	2.4	421	chr2R	13580479	3` UTR	CG6191 -	chr2R	13580690	3` UTR,3` UTR	CG6191 -,CG45088 -	chr2R	13580900	3` UTR,3` UTR	CG6191 -,CG45088 -	chr2R_17_13580001	chr2R_13580001	D9
919	chr2R	13728117	13728160	chr2R	13735799	13735839	opus	16	7682	2.0	4.5	3.2	3.8	7722	chr2R	13728117	intron	fas +	chr2R	13731978	intron	fas +	chr2R	13735839	intron	fas +	chr2R_16_13730001	chr2R_13730001	D9
923	chr2R	13905585	13905629	chr2R	13907592	13907636	Rt1a	21	2006	10.5	10.0	10.2	1.9	2051	chr2R	13905585	intron	shot -	chr2R	13906610	intron	shot -	chr2R	13907636	intron	shot -	chr2R_21_13905001	chr2R_13905001	D9
929	chr2R	14467285	14467325	chr2R	14476466	14476505	roo	25	9182	2.5	6.5	4.5	4.5	9220	chr2R	14467285	intergenic	not near genes	chr2R	14471895	intergenic	not near genes	chr2R	14476505	5` UTR	CR44462 +	chr2R_25_14470001	chr2R_14470001	D9
930	chr2R	14497370	14497384	chr2R	14498558	14498572	1360	4	1188	1.0	4.5	2.8	1.1	1202	chr2R	14497370	3` UTR	Cpsf160 -	chr2R	14497971	intron	Cpsf160 -	chr2R	14498572	3` UTR	Cpsf160 -	chr2R_4_14495001	chr2R_14495001	D9
939	chr2R	14889194	14889210	chr2R	14897827	14897843	Max-element	6	8633	8.5	1.0	4.8	1.0	8649	chr2R	14889194	intergenic	Cyp6a8 -	chr2R	14893518	intergenic	not near genes	chr2R	14897843	intergenic	not near genes	chr2R_6_14890001	chr2R_14890001	D9
945	chr2R	15004707	15004753	chr2R	15005061	15005107	jockey	12	353	8.5	3.0	5.8	1.8	400	chr2R	15004707	intergenic	not near genes	chr2R	15004907	intergenic	not near genes	chr2R	15005107	intergenic	not near genes	chr2R_12_15000001	chr2R_15000001	D9
946	chr2R	15015435	15015487	chr2R	15022884	15022936	mdg1	10	7449	5.5	5.5	5.5	1.5	7501	chr2R	15015435	intron	hbs +	chr2R	15019186	intron	hbs +	chr2R	15022936	intron	hbs +	chr2R_10_15015001	chr2R_15015001	D9
949	chr2R	15119312	15119349	chr2R	15127818	15127855	Tirant	18	8506	4.0	3.0	3.5	4.0	8543	chr2R	15119312	intron	chn +	chr2R	15123584	intron	chn +	chr2R	15127855	intron	chn +	chr2R_18_15120001	chr2R_15120001	D9
966	chr2R	16061705	16061715	chr2R	16064362	16064375	Burdock	9	2659	5.5	8.5	7.0	1.1	2670	chr2R	16061705	intergenic	not near genes	chr2R	16063040	intergenic	not near genes	chr2R	16064375	intergenic	not near genes	chr2R_9_16060001	chr2R_16060001	D9
976	chr2R	16539626	16539659	chr2R	16544860	16544893	copia	4	5234	4.5	3.5	4.0	0.8	5267	chr2R	16539626	intergenic	not near genes	chr2R	16542260	intergenic	not near genes	chr2R	16544893	intergenic	not near genes	chr2R_4_16540001	chr2R_16540001	D9
979	chr2R	17147219	17147265	chr2R	17152275	17152321	jockey	8	5056	2.5	13.0	7.8	0.9	5102	chr2R	17147219	intergenic	not near genes	chr2R	17149770	intergenic	not near genes	chr2R	17152321	intergenic	not near genes	chr2R_8_17145001	chr2R_17145001	D9
982	chr2R	17236492	17236534	chr2R	17241721	17241763	copia	7	5229	6.0	5.5	5.8	1.0	5271	chr2R	17236492	intron	mbl +	chr2R	17239128	intron	mbl +	chr2R	17241763	intron	mbl +	chr2R_7_17235001	chr2R_17235001	D9
984	chr2R	17485891	17485940	chr2R	17490686	17490732	F-element	5	4794	7.5	3.5	5.5	0.8	4841	chr2R	17485891	5` UTR,intron	CG43110 -,NT5E-2 +	chr2R	17488312	intron	NT5E-2 +	chr2R	17490732	intron	NT5E-2 +	chr2R_5_17485001	chr2R_17485001	D9
996	chr2R	18111668	18111710	chr2R	18115561	18115603	F-element	6	3892	3.5	3.0	3.2	1.4	3935	chr2R	18111668	intergenic	not near genes	chr2R	18113636	intergenic	not near genes	chr2R	18115603	intergenic	not near genes	chr2R_6_18110001	chr2R_18110001	D9
1004	chr2R	18358373	18358418	chr2R	18372610	18372654	roo	6	14236	0.5	1.5	1.0	3.0	14281	chr2R	18358373	intergenic	not near genes	chr2R	18365514	intergenic	not near genes	chr2R	18372654	intergenic	not near genes	chr2R_6_18365001	chr2R_18365001	D9
1010	chr2R	18575773	18575827	chr2R	18581986	18582040	3S18	16	6205	5.0	7.0	6.0	2.3	6267	chr2R	18575773	intron	GEFmeso -	chr2R	18578906	intron	GEFmeso -	chr2R	18582040	intron	GEFmeso -	chr2R_16_18575001	chr2R_18575001	D9
1011	chr2R	18590844	18590896	chr2R	18600021	18600073	roo	21	9177	5.0	6.0	5.5	3.2	9229	chr2R	18590844	intron	GEFmeso -	chr2R	18595458	intron	GEFmeso -	chr2R	18600073	intron	GEFmeso -	chr2R_21_18595001	chr2R_18595001	D9
1029	chr2R	19715833	19715856	chr2R	19723327	19723350	blood	5	7494	7.0	8.5	7.8	0.6	7517	chr2R	19715833	intergenic	not near genes	chr2R	19719592	intergenic	not near genes	chr2R	19723350	intergenic	not near genes	chr2R_5_19715001	chr2R_19715001	D9
1031	chr2R	19776581	19776624	chr2R	19779926	19779972	jockey	9	3347	3.5	5.0	4.2	1.7	3391	chr2R	19776581	intergenic	not near genes	chr2R	19778276	intergenic	not near genes	chr2R	19779972	intergenic	not near genes	chr2R_9_19775001	chr2R_19775001	D9
1035	chr2R	19914838	19914867	chr2R	19922275	19922304	mdg1	6	7437	9.5	7.5	8.5	0.6	7466	chr2R	19914838	intergenic	not near genes	chr2R	19918571	intergenic	not near genes	chr2R	19922304	intergenic	not near genes	chr2R_6_19915001	chr2R_19915001	D9
1038	chr2R	19957409	19957457	chr2R	19962636	19962682	copia	19	5226	4.0	4.0	4.0	3.8	5273	chr2R	19957409	intergenic	CG44623 +	chr2R	19960046	intergenic	not near genes	chr2R	19962682	intergenic	not near genes	chr2R_19_19960001	chr2R_19960001	D9
1040	chr2R	20069221	20069256	chr2R	20071876	20071911	opus	8	2655	4.5	2.5	3.5	1.8	2690	chr2R	20069221	intergenic	not near genes	chr2R	20070566	intergenic	not near genes	chr2R	20071911	intergenic	not near genes	chr2R_8_20070001	chr2R_20070001	D9
1047	chr2R	20739420	20739465	chr2R	20744213	20744258	F-element	20	4793	11.5	8.0	9.8	1.9	4838	chr2R	20739420	intron	dpr +	chr2R	20741839	intron	dpr +	chr2R	20744258	intron	dpr +	chr2R_20_20740001	chr2R_20740001	D9
1054	chr2R	21151094	21151140	chr2R	21153752	21153798	opus	14	2658	2.5	3.5	3.0	3.5	2704	chr2R	21151094	intron	CG30389 -	chr2R	21152446	intron	CG30389 -	chr2R	21153798	intron	CG30389 -	chr2R_14_21150001	chr2R_21150001	D9
1066	chr2R	21738257	21738306	chr2R	21747442	21747488	roo	23	9183	1.5	4.5	3.0	5.8	9231	chr2R	21738257	intergenic	not near genes	chr2R	21742872	intergenic	not near genes	chr2R	21747488	intergenic	not near genes	chr2R_23_21740001	chr2R_21740001	D9
1067	chr2R	21753063	21753114	chr2R	21753571	21753624	roo	8	509	3.5	3.0	3.2	1.9	561	chr2R	21753063	intergenic	not near genes	chr2R	21753344	intergenic	not near genes	chr2R	21753624	intergenic	not near genes	chr2R_8_21750001	chr2R_21750001	D9
1068	chr2R	21809501	21809553	chr2R	21817766	21817816	roo	8	8264	1.0	5.0	3.0	2.0	8315	chr2R	21809501	intergenic	not near genes	chr2R	21813658	intergenic	not near genes	chr2R	21817816	intergenic	not near genes	chr2R_8_21810001	chr2R_21810001	D9
1088	chr2R	22349678	22349714	chr2R	22351485	22351523	jockey	12	1808	4.5	4.0	4.2	2.3	1845	chr2R	22349678	intron	Liprin-gamma -	chr2R	22350600	intron	Liprin-gamma -	chr2R	22351523	intron	Liprin-gamma -	chr2R_12_22350001	chr2R_22350001	D9
1089	chr2R	22360359	22360375	chr2R	22360817	22360831	jockey	6	458	9.5	6.0	7.8	0.7	472	chr2R	22360359	intron	Liprin-gamma -	chr2R	22360595	intron	Liprin-gamma -	chr2R	22360831	intron	Liprin-gamma -	chr2R_6_22360001	chr2R_22360001	D9
1094	chr2R	22525725	22525773	chr2R	22529305	22529352	jockey	16	3579	5.0	6.0	5.5	2.5	3627	chr2R	22525725	intron	px -	chr2R	22527538	intron	px -	chr2R	22529352	intron	px -	chr2R_16_22525001	chr2R_22525001	D9
1096	chr2R	22580425	22580445	chr2R	22586594	22586596	diver	6	6165	2.5	3.5	3.0	1.5	6171	chr2R	22580425	intron	dnr1 -	chr2R	22583510	intron	dnr1 -	chr2R	22586596	intron	dnr1 -	chr2R_6_22580001	chr2R_22580001	D9
1101	chr2R	22774945	22774990	chr2R	22775388	22775434	jockey	15	444	3.0	2.0	2.5	4.3	489	chr2R	22774945	intron	CG42260 -	chr2R	22775190	intron	CG42260 -	chr2R	22775434	intron	CG42260 -	chr2R_15_22775001	chr2R_22775001	D9
1120	chr2R	23529551	23529607	chr2R	23537149	23537208	412	29	7600	8.0	8.0	8.0	3.2	7657	chr2R	23529551	intron	bw -	chr2R	23533380	intron	bw -	chr2R	23537208	exon	bw -	chr2R_29_23530001	chr2R_23530001	D9
1130	chr2R	23877730	23877744	chr2R	23878226	23878240	297	5	496	2.0	4.5	3.2	1.2	510	chr2R	23877730	intergenic	ken +,TM4SF +	chr2R	23877985	intergenic	TM4SF +	chr2R	23878240	5` UTR	TM4SF +	chr2R_5_23875001	chr2R_23875001	D9
1131	chr2R	23914285	23914331	chr2R	23921934	23921980	412	30	7648	7.0	15.0	11.0	2.5	7695	chr2R	23914285	exon	kcc +	chr2R	23918132	intron	kcc +	chr2R	23921980	exon	kcc +	chr2R_30_23915001	chr2R_23915001	D9
1135	chr2R	24147043	24147098	chr2R	24154644	24154701	412	27	7602	7.0	9.0	8.0	3.0	7658	chr2R	24147043	intron	Dat +	chr2R	24150872	intron	Dat +	chr2R	24154701	intron	Dat +	chr2R_27_24150001	chr2R_24150001	D9
1136	chr2R	24177209	24177257	chr2R	24184719	24184767	412	7	7510	1.5	1.5	1.5	2.8	7558	chr2R	24177209	3` UTR	Nop60B +	chr2R	24180988	intron	Nop60B +	chr2R	24184767	3` UTR	Nop60B +	chr2R_7_24180001	chr2R_24180001	D9
1137	chr2R	24272801	24272811	chr2R	24272904	24272904	roo	7	100	12.0	17.0	14.5	0.5	103	chr2R	24272801	intergenic	not near genes	chr2R	24272852	intergenic	not near genes	chr2R	24272904	intergenic	not near genes	chr2R_7_24270001	chr2R_24270001	D9
1144	chr2R	24647566	24647614	chr2R	24655146	24655196	412	18	7582	6.5	5.5	6.0	2.6	7630	chr2R	24647566	intergenic	not near genes	chr2R	24651381	intergenic	not near genes	chr2R	24655196	intergenic	not near genes	chr2R_18_24650001	chr2R_24650001	D9
1145	chr2R	24727860	24727912	chr2R	24735393	24735445	mdg1	29	7533	9.0	8.5	8.8	3.0	7585	chr2R	24727860	intron	Mid1 -	chr2R	24731652	intron	Mid1 -	chr2R	24735445	intron	Mid1 -	chr2R_29_24730001	chr2R_24730001	D9
1147	chr2R	24763596	24763643	chr2R	24765592	24765644	G2	19	2000	7.0	11.5	9.2	1.9	2048	chr2R	24763596	exon	CG3894 +	chr2R	24764620	intron	CG3894 +	chr2R	24765644	exon	CG3894 +	chr2R_19_24760001	chr2R_24760001	D9
1153	chr2R	25141660	25141679	chr2R	25159375	25159394	roo	6	17715	0.0	1.5	0.8	3.3	17734	chr2R	25141660	intergenic	not near genes	chr2R	25150527	intergenic	not near genes	chr2R	25159394	intergenic	not near genes	chr2R_6_25150001	chr2R_25150001	D9
1161	chr3L	402665	402717	chr3L	409742	409795	297	35	7077	10.5	9.0	9.8	3.2	7130	chr3L	402665	intergenic	not near genes	chr3L	406230	intergenic	not near genes	chr3L	409795	intergenic	not near genes	chr3L_35_405001	chr3L_405001	D9
1169	chr3L	789895	789944	chr3L	790405	790454	roo	9	510	3.5	3.5	3.5	2.0	559	chr3L	789895	intergenic	not near genes	chr3L	790174	intergenic	not near genes	chr3L	790454	intergenic	not near genes	chr3L_9_790001	chr3L_790001	D9
1170	chr3L	857981	858025	chr3L	866478	866519	Tirant	21	8505	10.5	11.0	10.8	1.8	8538	chr3L	857981	intergenic	not near genes	chr3L	862250	intergenic	not near genes	chr3L	866519	5` UTR	CG12502 +	chr3L_21_860001	chr3L_860001	D9
1172	chr3L	925154	925208	chr3L	932605	932659	mdg1	12	7451	4.0	5.5	4.8	2.1	7505	chr3L	925154	intron	Glut1 +	chr3L	928906	intron	Glut1 +	chr3L	932659	intron	Glut1 +	chr3L_12_925001	chr3L_925001	D9
1174	chr3L	939751	939794	chr3L	940897	940940	jockey	19	1145	6.5	4.5	5.5	2.9	1189	chr3L	939751	intron	Glut1 +	chr3L	940346	intron	Glut1 +	chr3L	940940	intron	Glut1 +	chr3L_19_940001	chr3L_940001	D9
1177	chr3L	1047330	1047384	chr3L	1055167	1055211	412	14	7827	1.5	2.5	2.0	4.7	7881	chr3L	1047330	intron	bab1 -	chr3L	1051270	intron	bab1 -	chr3L	1055211	intron	bab1 -	chr3L_14_1050001	chr3L_1050001	D9
1181	chr3L	1154117	1154154	chr3L	1163292	1163329	roo	12	9175	2.5	6.0	4.2	2.3	9212	chr3L	1154117	intron	bab2 -	chr3L	1158723	intron	bab2 -	chr3L	1163329	intron	bab2 -	chr3L_12_1155001	chr3L_1155001	D9
1182	chr3L	1219572	1219622	chr3L	1227327	1227378	412	31	7757	7.0	8.0	7.5	3.6	7806	chr3L	1219572	intron	mwh +	chr3L	1223475	intron	mwh +	chr3L	1227378	intron	mwh +	chr3L_31_1220001	chr3L_1220001	D9
1190	chr3L	1424757	1424767	chr3L	1430026	1430036	Rt1a	6	5269	0.5	14.5	7.5	0.7	5279	chr3L	1424757	intron	Ptp61F -	chr3L	1427396	intron	Ptp61F -	chr3L	1430036	intron	Ptp61F -	chr3L_6_1425001	chr3L_1425001	D9
1191	chr3L	1485715	1485738	chr3L	1486909	1486930	1360	14	1191	9.0	22.0	15.5	0.8	1215	chr3L	1485715	intron	stet -	chr3L	1486322	intron	stet -	chr3L	1486930	intron	stet -	chr3L_14_1485001	chr3L_1485001	D9
1192	chr3L	1505978	1506027	chr3L	1513600	1513649	17.6	23	7622	6.0	8.0	7.0	2.9	7671	chr3L	1505978	intron,intron	Psa +,cue -	chr3L	1509814	intron,intron	Psa +,cue -	chr3L	1513649	intron,intron	Psa +,cue -	chr3L_23_1505001	chr3L_1505001	D9
1214	chr3L	2447481	2447531	chr3L	2456662	2456712	roo	24	9180	5.5	5.5	5.5	3.7	9231	chr3L	2447481	intron	CG45186 +	chr3L	2452096	intron	CG45186 +	chr3L	2456712	intron	CG45186 +	chr3L_24_2450001	chr3L_2450001	D9
1226	chr3L	2927816	2927858	chr3L	2936118	2936160	Tirant	9	8302	4.0	1.5	2.8	2.4	8344	chr3L	2927816	intron	Shab +	chr3L	2931988	intron	Shab +	chr3L	2936160	intron	Shab +	chr3L_9_2930001	chr3L_2930001	D9
1230	chr3L	3040301	3040355	chr3L	3042115	3042169	S-element	8	1813	6.0	1.0	3.5	1.8	1868	chr3L	3040301	3` UTR	CG2162 +	chr3L	3041235	intergenic	not near genes	chr3L	3042169	intergenic	Jafrac2 +	chr3L_8_3040001	chr3L_3040001	D9
1232	chr3L	3051718	3051746	chr3L	3051985	3052004	pogo	12	265	11.0	3.5	7.2	1.5	286	chr3L	3051718	3` UTR	CG32485 +	chr3L	3051861	intergenic	CG32485 +	chr3L	3052004	intergenic	CG32485 +	chr3L_12_3050001	chr3L_3050001	D9
1233	chr3L	3061259	3061315	chr3L	3069867	3069923	Tirant	24	8608	7.5	6.0	6.8	3.1	8664	chr3L	3061259	intron	CG32486 -	chr3L	3065591	intron	CG32486 -	chr3L	3069923	intron	CG32486 -	chr3L_24_3065001	chr3L_3065001	D9
1236	chr3L	3281420	3281438	chr3L	3281941	3281959	Doc	6	521	20.5	10.0	15.2	0.4	539	chr3L	3281420	intron	CG12017 +	chr3L	3281690	intron	CG12017 +	chr3L	3281959	intron	CG12017 +	chr3L_6_3280001	chr3L_3280001	D9
1237	chr3L	3281440	3281470	chr3L	3281937	3281991	Doc	19	515	13.0	9.0	11.0	1.6	551	chr3L	3281440	intron	CG12017 +	chr3L	3281716	intron	CG12017 +	chr3L	3281991	intron	CG12017 +	chr3L_19_3280001	chr3L_3280001	D9
1244	chr3L	3475054	3475095	chr3L	3475523	3475564	jockey	20	468	7.0	9.5	8.2	2.2	510	chr3L	3475054	intron	CG42324 +	chr3L	3475309	intron	CG42324 +	chr3L	3475564	intron	CG42324 +	chr3L_20_3475001	chr3L_3475001	D9
1248	chr3L	3601274	3601329	chr3L	3606610	3606665	copia	13	5336	1.5	2.0	1.8	4.6	5391	chr3L	3601274	intron	Eip63E +	chr3L	3603970	intron	Eip63E +	chr3L	3606665	intron	Eip63E +	chr3L_13_3600001	chr3L_3600001	D9
1255	chr3L	3833715	3833746	chr3L	3833981	3834012	pogo	5	266	11.5	2.0	6.8	0.6	297	chr3L	3833715	intron	enc +	chr3L	3833864	intron	enc +	chr3L	3834012	intron	enc +	chr3L_5_3830001	chr3L_3830001	D9
1264	chr3L	4901107	4901159	chr3L	4907322	4907374	diver	17	6215	2.5	5.0	3.8	3.5	6267	chr3L	4901107	intergenic	CG13704 +	chr3L	4904240	intergenic	not near genes	chr3L	4907374	intergenic	not near genes	chr3L_17_4900001	chr3L_4900001	D9
1268	chr3L	5034136	5034168	chr3L	5043313	5043345	roo	5	9177	9.5	0.0	4.8	0.9	9209	chr3L	5034136	intron	Con -	chr3L	5038740	intron	Con -	chr3L	5043345	intron	Con -	chr3L_5_5035001	chr3L_5035001	D9
1269	chr3L	5045434	5045481	chr3L	5050238	5050285	Doc	10	4806	4.0	5.5	4.8	1.7	4851	chr3L	5045434	intron	Con -	chr3L	5047860	intron	Con -	chr3L	5050285	intron	Con -	chr3L_10_5045001	chr3L_5045001	D9
1278	chr3L	5537721	5537731	chr3L	5538088	5538098	jockey	6	367	6.0	6.0	6.0	0.9	377	chr3L	5537721	intergenic	not near genes	chr3L	5537910	intergenic	CG10625 -	chr3L	5538098	intergenic	CG10625 -	chr3L_6_5535001	chr3L_5535001	D9
1282	chr3L	5910007	5910031	chr3L	5910273	5910297	pogo	15	266	13.5	0.0	6.8	1.9	290	chr3L	5910007	intron	CG13288 +	chr3L	5910152	intron	CG13288 +	chr3L	5910297	intron	CG13288 +	chr3L_15_5910001	chr3L_5910001	D9
1285	chr3L	5926294	5926340	chr3L	5926507	5926553	BS	21	213	8.5	13.0	10.8	1.8	259	chr3L	5926294	intron	Vap-33B +	chr3L	5926424	intron	Vap-33B +	chr3L	5926553	intron	Vap-33B +	chr3L_21_5925001	chr3L_5925001	D9
1288	chr3L	6001664	6001711	chr3L	6004389	6004436	jockey	12	2725	4.0	0.5	2.2	3.8	2772	chr3L	6001664	intron	PVRAP +	chr3L	6003050	intron	PVRAP +	chr3L	6004436	intron	PVRAP +	chr3L_12_6000001	chr3L_6000001	D9
1290	chr3L	6040352	6040394	chr3L	6042733	6042775	Doc	6	2381	0.0	4.0	2.0	2.0	2423	chr3L	6040352	intergenic	Jon65Aiv +	chr3L	6041564	intergenic	not near genes	chr3L	6042775	intergenic	not near genes	chr3L_6_6040001	chr3L_6040001	D9
1295	chr3L	6220890	6220945	chr3L	6230067	6230122	roo	20	9176	3.0	1.5	2.2	6.2	9232	chr3L	6220890	5` UTR	pncr008:3L +	chr3L	6225506	intergenic	not near genes	chr3L	6230122	intergenic	not near genes	chr3L_20_6225001	chr3L_6225001	D9
1297	chr3L	6334987	6335038	chr3L	6335482	6335534	297	15	496	4.0	3.0	3.5	3.3	547	chr3L	6334987	intron	CG13300 -	chr3L	6335260	intron	CG13300 -	chr3L	6335534	intron	CG13300 -	chr3L_15_6335001	chr3L_6335001	D9
1299	chr3L	6405649	6405674	chr3L	6432135	6432163	roo	9	26489	3.5	4.0	3.8	1.9	26514	chr3L	6405649	intron	CG42747 +	chr3L	6418906	intron	CG42747 +	chr3L	6432163	intron	CG42747 +	chr3L_9_6415001	chr3L_6415001	D9
1301	chr3L	6620591	6620603	chr3L	6621054	6621069	Rt1c	9	465	3.5	16.0	9.8	0.8	478	chr3L	6620591	intergenic	not near genes	chr3L	6620830	intergenic	not near genes	chr3L	6621069	intergenic	not near genes	chr3L_9_6620001	chr3L_6620001	D9
1307	chr3L	6781106	6781153	chr3L	6783141	6783188	Doc	4	2036	1.5	0.0	0.8	2.2	2082	chr3L	6781106	intergenic	not near genes	chr3L	6782147	intergenic	not near genes	chr3L	6783188	intergenic	not near genes	chr3L_4_6780001	chr3L_6780001	D9
1311	chr3L	6855907	6855953	chr3L	6860716	6860762	Doc	17	4808	5.0	7.5	6.2	2.4	4855	chr3L	6855907	intergenic	not near genes	chr3L	6858334	intergenic	not near genes	chr3L	6860762	intergenic	not near genes	chr3L_17_6855001	chr3L_6855001	D9
1313	chr3L	6887495	6887541	chr3L	6895011	6895058	roo	8	7517	4.0	0.0	2.0	2.7	7563	chr3L	6887495	intergenic	not near genes	chr3L	6891276	intergenic	not near genes	chr3L	6895058	intergenic	not near genes	chr3L_8_6890001	chr3L_6890001	D9
1317	chr3L	6994888	6994914	chr3L	6995524	6995550	BS	5	636	0.0	5.5	2.8	1.3	662	chr3L	6994888	intergenic	bin +	chr3L	6995219	intergenic	not near genes	chr3L	6995550	intergenic	not near genes	chr3L_5_6995001	chr3L_6995001	D9
1332	chr3L	7377289	7377312	chr3L	7380419	7380442	297	9	3130	7.0	1.5	4.2	1.7	3153	chr3L	7377289	intron	SMSr -	chr3L	7378866	intron	SMSr -	chr3L	7380442	intron	SMSr -	chr3L_9_7375001	chr3L_7375001	D9
1334	chr3L	7498738	7498778	chr3L	7503538	7503580	F-element	11	4801	4.5	3.0	3.8	2.3	4842	chr3L	7498738	5` UTR	CG8539 -	chr3L	7501159	intergenic	not near genes	chr3L	7503580	intergenic	not near genes	chr3L_11_7500001	chr3L_7500001	D9
1343	chr3L	7793697	7793743	chr3L	7800774	7800820	297	14	7077	4.0	2.5	3.2	3.3	7123	chr3L	7793697	intron	CG32369 -	chr3L	7797258	intron	CG32369 -	chr3L	7800820	intron	CG32369 -	chr3L_14_7795001	chr3L_7795001	D9
1348	chr3L	7886482	7886544	chr3L	7889029	7889085	Stalker4	15	2544	0.0	2.0	1.0	7.5	2603	chr3L	7886482	intron	CG32365 +	chr3L	7887784	intron	CG32365 +	chr3L	7889085	intron	CG32365 +	chr3L_15_7885001	chr3L_7885001	D9
1349	chr3L	7916817	7916852	chr3L	7926013	7926047	roo	6	9196	3.5	4.0	3.8	1.2	9230	chr3L	7916817	3` UTR	syd -	chr3L	7921432	intron	syd -	chr3L	7926047	3` UTR	syd -	chr3L_6_7920001	chr3L_7920001	D9
1350	chr3L	7985345	7985387	chr3L	7987698	7987740	NOF	13	2353	9.0	5.5	7.2	1.6	2395	chr3L	7985345	intron	nmo +	chr3L	7986542	intron	nmo +	chr3L	7987740	intron	nmo +	chr3L_13_7985001	chr3L_7985001	D9
1352	chr3L	8481747	8481801	chr3L	8490931	8490984	roo	32	9183	7.5	8.0	7.8	3.6	9237	chr3L	8481747	intron	CG43163 -	chr3L	8486366	intron	CG43163 -	chr3L	8490984	intron	CG43163 -	chr3L_32_8485001	chr3L_8485001	D9
1353	chr3L	8498273	8498326	chr3L	8505765	8505818	blood	14	7492	2.0	3.5	2.8	3.7	7545	chr3L	8498273	intron	CG43163 -	chr3L	8502046	intron	CG43163 -	chr3L	8505818	intron	CG43163 -	chr3L_14_8500001	chr3L_8500001	D9
1358	chr3L	8791252	8791308	chr3L	8796697	8796752	I-element	16	5444	8.0	0.0	4.0	3.2	5500	chr3L	8791252	exon	Fhos +	chr3L	8794002	intron	Fhos +	chr3L	8796752	intron	Fhos +	chr3L_16_8790001	chr3L_8790001	D9
1366	chr3L	9076902	9076946	chr3L	9084487	9084531	412	13	7584	12.0	5.0	8.5	1.4	7629	chr3L	9076902	exon	Tequila +	chr3L	9080716	intron	Tequila +	chr3L	9084531	exon	Tequila +	chr3L_13_9080001	chr3L_9080001	D9
1369	chr3L	9130535	9130581	chr3L	9134321	9134367	412	28	3785	8.0	5.5	6.8	3.6	3832	chr3L	9130535	intergenic	bol -	chr3L	9132451	intergenic	not near genes	chr3L	9134367	intergenic	Dhpr +	chr3L_28_9130001	chr3L_9130001	D9
1370	chr3L	9164673	9164707	chr3L	9166165	9166197	hobo	12	1491	6.0	0.0	3.0	3.0	1524	chr3L	9164673	intron	Rdl -	chr3L	9165435	intron	Rdl -	chr3L	9166197	intron	Rdl -	chr3L_12_9165001	chr3L_9165001	D9
1371	chr3L	9219221	9219262	chr3L	9219918	9219959	jockey	21	696	12.0	14.5	13.2	1.5	738	chr3L	9219221	intergenic	not near genes	chr3L	9219590	intergenic	not near genes	chr3L	9219959	intergenic	not near genes	chr3L_21_9215001	chr3L_9215001	D9
1373	chr3L	9270593	9270650	chr3L	9278373	9278402	roo	15	7776	5.5	8.5	7.0	1.9	7809	chr3L	9270593	intron	GluRIB +	chr3L	9274498	intron	GluRIB +	chr3L	9278402	exon	GluRIB +	chr3L_15_9270001	chr3L_9270001	D9
1381	chr3L	9443491	9443509	chr3L	9445307	9445325	S-element	7	1816	4.5	0.0	2.2	2.2	1834	chr3L	9443491	intron	CG33926 +	chr3L	9444408	intron	CG33926 +	chr3L	9445325	intron	CG33926 +	chr3L_7_9440001	chr3L_9440001	D9
1384	chr3L	9501687	9501725	chr3L	9502198	9502236	roo	7	511	6.0	4.0	5.0	1.2	549	chr3L	9501687	intron	path -	chr3L	9501962	intron	path -	chr3L	9502236	intron	path -	chr3L_7_9500001	chr3L_9500001	D9
1386	chr3L	9533739	9533786	chr3L	9541323	9541371	412	26	7584	12.0	17.5	14.8	1.6	7632	chr3L	9533739	intergenic	not near genes	chr3L	9537555	intergenic	not near genes	chr3L	9541371	intergenic	not near genes	chr3L_26_9535001	chr3L_9535001	D9
1388	chr3L	9571895	9571919	chr3L	9572266	9572292	jockey	6	373	5.5	2.0	3.8	1.2	397	chr3L	9571895	intron	CG42673 +	chr3L	9572094	intron	CG42673 +	chr3L	9572292	intron	CG42673 +	chr3L_6_9570001	chr3L_9570001	D9
1390	chr3L	9575885	9575941	chr3L	9580990	9581046	jockey	24	5105	4.5	5.0	4.8	4.1	5161	chr3L	9575885	intron	CG42673 +	chr3L	9578466	intron	CG42673 +	chr3L	9581046	intron	CG42673 +	chr3L_24_9575001	chr3L_9575001	D9
1399	chr3L	9929647	9929697	chr3L	9938454	9938503	roo	6	8806	1.5	2.0	1.8	2.1	8856	chr3L	9929647	intron	CG34356 +	chr3L	9934075	intron	CG34356 +	chr3L	9938503	intron	CG34356 +	chr3L_6_9930001	chr3L_9930001	D9
1416	chr3L	10414924	10414965	chr3L	10417321	10417362	Doc	10	2397	5.0	4.0	4.5	1.8	2438	chr3L	10414924	intergenic	CG12362 +	chr3L	10416143	intergenic	not near genes	chr3L	10417362	intergenic	not near genes	chr3L_10_10415001	chr3L_10415001	D9
1433	chr3L	11264443	11264493	chr3L	11271420	11271463	17.6	13	6976	4.0	8.5	6.2	1.8	7020	chr3L	11264443	intergenic	not near genes	chr3L	11267953	intergenic	not near genes	chr3L	11271463	intergenic	not near genes	chr3L_13_11265001	chr3L_11265001	D9
1442	chr3L	11564788	11564794	chr3L	11572438	11572444	412	4	7650	12.5	24.5	18.5	0.2	7656	chr3L	11564788	exon	CG33267 +	chr3L	11568616	intron	CG33267 +	chr3L	11572444	exon	CG33267 +	chr3L_4_11565001	chr3L_11565001	D9
1447	chr3L	11723063	11723083	chr3L	11727881	11727890	Doc	4	4816	4.0	1.5	2.8	1.1	4827	chr3L	11723063	3` UTR	Bmcp +	chr3L	11725476	intron	Bmcp +	chr3L	11727890	3` UTR	Bmcp +	chr3L_4_11725001	chr3L_11725001	D9
1488	chr3L	12874901	12874956	chr3L	12877218	12877273	jockey	11	2317	4.5	2.5	3.5	2.4	2372	chr3L	12874901	intergenic	not near genes	chr3L	12876087	intergenic	not near genes	chr3L	12877273	intergenic	not near genes	chr3L_11_12875001	chr3L_12875001	D9
1490	chr3L	12919255	12919280	chr3L	12924753	12924778	Rt1c	9	5498	15.5	11.0	13.2	0.6	5523	chr3L	12919255	intergenic	not near genes	chr3L	12922016	intergenic	not near genes	chr3L	12924778	intergenic	not near genes	chr3L_9_12920001	chr3L_12920001	D9
1492	chr3L	12957787	12957811	chr3L	12962294	12962318	copia	7	4507	3.5	11.5	7.5	0.8	4531	chr3L	12957787	intergenic	not near genes	chr3L	12960052	intergenic	not near genes	chr3L	12962318	intergenic	not near genes	chr3L_7_12960001	chr3L_12960001	D9
1511	chr3L	13525136	13525188	chr3L	13532957	13533009	roo	17	7821	3.0	5.0	4.0	3.4	7873	chr3L	13525136	intergenic	not near genes	chr3L	13529072	intergenic	not near genes	chr3L	13533009	intergenic	not near genes	chr3L_17_13525001	chr3L_13525001	D9
1513	chr3L	13574608	13574620	chr3L	13580135	13580156	Rt1c	9	5535	15.5	13.0	14.2	0.6	5548	chr3L	13574608	intron	bru-3 -	chr3L	13577382	intron	bru-3 -	chr3L	13580156	intron	bru-3 -	chr3L_9_13575001	chr3L_13575001	D9
1516	chr3L	13804540	13804566	chr3L	13822851	13822876	roo	6	18311	5.0	5.0	5.0	1.0	18336	chr3L	13804540	intergenic	not near genes	chr3L	13813708	intergenic	not near genes	chr3L	13822876	intergenic	not near genes	chr3L_6_13810001	chr3L_13810001	D9
1527	chr3L	14245556	14245593	chr3L	14245665	14245712	1360	17	118	11.5	10.5	11.0	1.4	156	chr3L	14245556	3` UTR	CR44561 -	chr3L	14245634	3` UTR	CR44561 -	chr3L	14245712	intergenic	CR44561 -,CR44560 +	chr3L_17_14245001	chr3L_14245001	D9
1529	chr3L	14295956	14296011	chr3L	14296467	14296522	roo	23	511	10.5	4.5	7.5	2.7	566	chr3L	14295956	intron	fz +	chr3L	14296239	intron	fz +	chr3L	14296522	intron	fz +	chr3L_23_14295001	chr3L_14295001	D9
1530	chr3L	14311998	14312049	chr3L	14316837	14316888	X-element	30	4838	8.5	5.5	7.0	3.8	4890	chr3L	14311998	exon	fz +	chr3L	14314443	intron	fz +	chr3L	14316888	intron	fz +	chr3L_30_14310001	chr3L_14310001	D9
1533	chr3L	14468430	14468475	chr3L	14473661	14473704	copia	11	5230	6.5	7.0	6.8	1.4	5274	chr3L	14468430	intron	bbg -	chr3L	14471067	intron	bbg -	chr3L	14473704	intron	bbg -	chr3L_11_14470001	chr3L_14470001	D9
1539	chr3L	14721165	14721208	chr3L	14723033	14723074	Rt1c	27	1867	12.0	13.0	12.5	2.0	1909	chr3L	14721165	intron	ome +	chr3L	14722120	intron	ome +	chr3L	14723074	intron	ome +	chr3L_27_14720001	chr3L_14720001	D9
1548	chr3L	14954357	14954398	chr3L	14956051	14956089	transib2	10	1693	2.0	3.0	2.5	2.9	1732	chr3L	14954357	intergenic	not near genes	chr3L	14955223	intergenic	not near genes	chr3L	14956089	intergenic	not near genes	chr3L_10_14955001	chr3L_14955001	D9
1551	chr3L	15085024	15085081	chr3L	15086215	15086271	1360	16	1188	1.0	2.5	1.8	5.7	1247	chr3L	15085024	intron	cp309 -	chr3L	15085648	intron	cp309 -	chr3L	15086271	intron	cp309 -	chr3L_16_15085001	chr3L_15085001	D9
1554	chr3L	15295758	15295793	chr3L	15298625	15298661	gypsy5	8	2867	15.5	17.5	16.5	0.5	2903	chr3L	15295758	intergenic	not near genes	chr3L	15297210	intergenic	not near genes	chr3L	15298661	intergenic	Best4 +	chr3L_8_15295001	chr3L_15295001	D9
1556	chr3L	15423745	15423773	chr3L	15426614	15426642	opus	12	2869	9.0	2.5	5.8	1.8	2897	chr3L	15423745	intergenic	not near genes	chr3L	15425194	intergenic	not near genes	chr3L	15426642	intergenic	not near genes	chr3L_12_15425001	chr3L_15425001	D9
1562	chr3L	15554899	15554946	chr3L	15556711	15556758	S-element	9	1812	4.5	6.5	5.5	1.4	1859	chr3L	15554899	intron	AGO2 +	chr3L	15555828	intron	AGO2 +	chr3L	15556758	intron	AGO2 +	chr3L_9_15555001	chr3L_15555001	D9
1572	chr3L	15899207	15899253	chr3L	15899799	15899845	jockey	35	591	6.0	7.0	6.5	4.7	638	chr3L	15899207	intergenic	pHCl -	chr3L	15899526	intergenic	pHCl -	chr3L	15899845	intergenic	sff -	chr3L_35_15895001	chr3L_15895001	D9
1574	chr3L	15929214	15929230	chr3L	15938383	15938401	roo	4	9171	0.5	8.0	4.2	0.8	9187	chr3L	15929214	intron	Pka-C3 -	chr3L	15933808	intron	Pka-C3 -	chr3L	15938401	intron	Pka-C3 -	chr3L_4_15930001	chr3L_15930001	D9
1581	chr3L	16184088	16184135	chr3L	16188932	16188979	X-element	12	4844	0.5	8.5	4.5	2.2	4891	chr3L	16184088	intergenic	not near genes	chr3L	16186534	intergenic	not near genes	chr3L	16188979	intergenic	not near genes	chr3L_12_16185001	chr3L_16185001	D9
1593	chr3L	16443822	16443868	chr3L	16446189	16446233	Doc	14	2365	1.0	5.0	3.0	3.5	2411	chr3L	16443822	intron,intron	CG33158 +,dsx-c73A -	chr3L	16445028	intron,intron	CG33158 +,dsx-c73A -	chr3L	16446233	intron,intron	CG33158 +,dsx-c73A -	chr3L_14_16445001	chr3L_16445001	D9
1594	chr3L	16493953	16494004	chr3L	16494493	16494546	jockey	25	542	7.0	10.5	8.8	2.6	593	chr3L	16493953	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L	16494250	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L	16494546	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L_25_16490001	chr3L_16490001	D9
1600	chr3L	16616495	16616533	chr3L	16621848	16621880	297	17	5352	3.5	8.0	5.8	2.5	5385	chr3L	16616495	3` UTR	Abl -	chr3L	16619188	3` UTR	Abl -	chr3L	16621880	3` UTR	Abl -	chr3L_17_16615001	chr3L_16615001	D9
1602	chr3L	16684004	16684037	chr3L	16689260	16689293	copia	6	5256	7.0	3.5	5.2	1.0	5289	chr3L	16684004	intron,intron	Lasp -,CG43954 -	chr3L	16686648	intron,intron	Lasp -,CG43954 -	chr3L	16689293	intron,intron,5` UTR	Lasp -,CG43954 -,CR45179 +	chr3L_6_16685001	chr3L_16685001	D9
1613	chr3L	16945706	16945757	chr3L	16954884	16954935	roo	31	9178	10.0	4.0	7.0	3.9	9229	chr3L	16945706	exon	Obp73a +	chr3L	16950320	intergenic	not near genes	chr3L	16954935	5` UTR	Nc73EF +	chr3L_31_16950001	chr3L_16950001	D9
1614	chr3L	17034911	17034957	chr3L	17035124	17035170	G2	7	213	4.0	1.5	2.8	1.8	259	chr3L	17034911	intergenic	not near genes	chr3L	17035040	intergenic	not near genes	chr3L	17035170	intergenic	beg +	chr3L_7_17035001	chr3L_17035001	D9
1615	chr3L	17084982	17085032	chr3L	17094154	17094206	roo	20	9174	7.5	4.5	6.0	2.9	9224	chr3L	17084982	intron	Rbp6 -	chr3L	17089594	intron	Rbp6 -	chr3L	17094206	intron	Rbp6 -	chr3L_20_17085001	chr3L_17085001	D9
1629	chr3L	17516954	17517013	chr3L	17524537	17524563	412	20	7580	2.5	10.0	6.2	2.8	7609	chr3L	17516954	intron	CG7564 +	chr3L	17520758	intron	CG7564 +	chr3L	17524563	3` UTR	CG7564 +	chr3L_20_17520001	chr3L_17520001	D9
1634	chr3L	17730830	17730874	chr3L	17738185	17738229	mdg1	7	7355	2.0	2.5	2.2	2.2	7399	chr3L	17730830	intron	Ccn +	chr3L	17734530	intron	Ccn +	chr3L	17738229	intron	Ccn +	chr3L_7_17730001	chr3L_17730001	D9
1639	chr3L	17799811	17799837	chr3L	17801623	17801649	S-element	8	1812	2.0	5.5	3.8	1.7	1838	chr3L	17799811	intron	NUCB1 -	chr3L	17800730	intron	NUCB1 -	chr3L	17801649	intron	NUCB1 -	chr3L_8_17800001	chr3L_17800001	D9
1642	chr3L	17918354	17918402	chr3L	17921182	17921230	opus	12	2828	4.0	2.5	3.2	2.9	2876	chr3L	17918354	intergenic	not near genes	chr3L	17919792	intergenic	not near genes	chr3L	17921230	intergenic	not near genes	chr3L_12_17915001	chr3L_17915001	D9
1648	chr3L	18047684	18047738	chr3L	18056766	18056820	roo	11	9082	1.0	3.0	2.0	3.7	9136	chr3L	18047684	intron	Eip75B -	chr3L	18052252	intron	Eip75B -	chr3L	18056820	intron	Eip75B -	chr3L_11_18050001	chr3L_18050001	D9
1669	chr3L	18506116	18506152	chr3L	18509604	18509640	F-element	7	3488	3.0	4.5	3.8	1.5	3524	chr3L	18506116	intergenic	not near genes	chr3L	18507878	intergenic	not near genes	chr3L	18509640	intergenic	not near genes	chr3L_7_18505001	chr3L_18505001	D9
1670	chr3L	18528606	18528653	chr3L	18537791	18537839	roo	12	9186	2.5	1.5	2.0	4.0	9233	chr3L	18528606	intergenic	not near genes	chr3L	18533222	intergenic	not near genes	chr3L	18537839	intergenic	not near genes	chr3L_12_18530001	chr3L_18530001	D9
1672	chr3L	18593926	18593952	chr3L	18595931	18595957	Doc	12	2005	9.5	0.5	5.0	2.0	2031	chr3L	18593926	intergenic	term -	chr3L	18594942	intergenic	not near genes	chr3L	18595957	intergenic	CR45389 +	chr3L_12_18590001	chr3L_18590001	D9
1678	chr3L	18710766	18710791	chr3L	18718741	18718766	Stalker2	9	7974	3.5	4.0	3.8	1.9	8000	chr3L	18710766	intergenic	not near genes	chr3L	18714766	intergenic	not near genes	chr3L	18718766	intergenic	not near genes	chr3L_9_18710001	chr3L_18710001	D9
1681	chr3L	18772393	18772432	chr3L	18781099	18781138	roo	6	8706	7.0	6.5	6.8	0.8	8745	chr3L	18772393	intron	ftz-f1 -	chr3L	18776766	intron	ftz-f1 -	chr3L	18781138	intron	ftz-f1 -	chr3L_6_18775001	chr3L_18775001	D9
1687	chr3L	19008828	19008870	chr3L	19009191	19009233	jockey	12	363	3.5	8.0	5.8	1.8	405	chr3L	19008828	intron	nkd -	chr3L	19009030	intron	nkd -	chr3L	19009233	intron	nkd -	chr3L_12_19005001	chr3L_19005001	D9
1692	chr3L	19117020	19117075	chr3L	19124492	19124547	mdg1	20	7472	8.0	3.5	5.8	2.9	7527	chr3L	19117020	intron	CG14082 -	chr3L	19120784	intron	CG14082 -	chr3L	19124547	intron	CG14082 -	chr3L_20_19120001	chr3L_19120001	D9
1698	chr3L	19208036	19208092	chr3L	19209435	19209491	Doc	20	1398	3.5	5.5	4.5	3.6	1455	chr3L	19208036	intron	fz2 -	chr3L	19208764	intron	fz2 -	chr3L	19209491	intron	fz2 -	chr3L_20_19205001	chr3L_19205001	D9
1706	chr3L	19398913	19398931	chr3L	19403655	19403673	F-element	12	4742	3.0	9.5	6.2	1.7	4760	chr3L	19398913	intron	CG32206 -	chr3L	19401293	intron	CG32206 -	chr3L	19403673	intron	CG32206 -	chr3L_12_19400001	chr3L_19400001	D9
1712	chr3L	19820273	19820306	chr3L	19827847	19827880	412	10	7574	4.0	1.5	2.8	2.6	7607	chr3L	19820273	intron	Deaf1 +	chr3L	19824076	intron	Deaf1 +	chr3L	19827880	intron	Deaf1 +	chr3L_10_19820001	chr3L_19820001	D9
1713	chr3L	19848484	19848523	chr3L	19857699	19857738	roo	12	9214	4.5	2.0	3.2	2.9	9254	chr3L	19848484	intron	Papss +	chr3L	19853111	intron	Papss +	chr3L	19857738	intron	Papss +	chr3L_12_19850001	chr3L_19850001	D9
1714	chr3L	19861795	19861849	chr3L	19863608	19863662	S-element	16	1813	4.0	1.5	2.8	4.2	1867	chr3L	19861795	5` UTR	CR45433 +	chr3L	19862728	intergenic	not near genes	chr3L	19863662	intergenic	not near genes	chr3L_16_19860001	chr3L_19860001	D9
1722	chr3L	20113640	20113682	chr3L	20122922	20122964	roo	8	9280	2.0	3.0	2.5	2.3	9324	chr3L	20113640	intergenic	not near genes	chr3L	20118302	intergenic	not near genes	chr3L	20122964	intergenic	not near genes	chr3L_8_20115001	chr3L_20115001	D9
1727	chr3L	20257307	20257358	chr3L	20258452	20258503	pogo	14	1144	3.5	4.0	3.8	2.9	1196	chr3L	20257307	intron	rdgC +	chr3L	20257905	intron	rdgC +	chr3L	20258503	intron	rdgC +	chr3L_14_20255001	chr3L_20255001	D9
1729	chr3L	20321119	20321129	chr3L	20342900	20342910	17.6	5	21781	11.0	25.5	18.2	0.3	21791	chr3L	20321119	exon	Spn77Bb +	chr3L	20332014	intergenic	not near genes	chr3L	20342910	exon	Spn77Bc +	chr3L_5_20330001	chr3L_20330001	D9
1732	chr3L	20476734	20476782	chr3L	20484356	20484406	springer	12	7624	4.0	4.0	4.0	2.4	7672	chr3L	20476734	3` UTR	isoQC +	chr3L	20480570	intergenic	not near genes	chr3L	20484406	3` UTR	ZnT77C -	chr3L_12_20480001	chr3L_20480001	D9
1733	chr3L	20487644	20487673	chr3L	20488120	20488149	INE-1	19	476	9.5	9.5	9.5	1.8	505	chr3L	20487644	intron	ZnT77C -	chr3L	20487896	intron	ZnT77C -	chr3L	20488149	exon	ZnT77C -	chr3L_19_20485001	chr3L_20485001	D9
1736	chr3L	20590040	20590093	chr3L	20590604	20590657	412	19	563	6.0	4.5	5.2	3.1	617	chr3L	20590040	intergenic	not near genes	chr3L	20590348	intergenic	not near genes	chr3L	20590657	intergenic	not near genes	chr3L_19_20590001	chr3L_20590001	D9
1738	chr3L	20821271	20821292	chr3L	20824765	20824786	NOF	6	3494	4.5	5.0	4.8	1.0	3515	chr3L	20821271	intron	Pka-R1 +	chr3L	20823028	intron	Pka-R1 +	chr3L	20824786	intron	Pka-R1 +	chr3L_6_20820001	chr3L_20820001	D9
1742	chr3L	21014889	21014943	chr3L	21023395	21023449	Tirant	26	8505	9.5	6.0	7.8	3.0	8560	chr3L	21014889	intron	skd -	chr3L	21019169	intron	skd -	chr3L	21023449	intron	skd -	chr3L_26_21015001	chr3L_21015001	D9
1745	chr3L	21151848	21151897	chr3L	21156957	21157005	flea	22	5109	5.5	6.0	5.8	3.2	5157	chr3L	21151848	intron	Ac78C -	chr3L	21154426	intron	Ac78C -	chr3L	21157005	intron	Ac78C -	chr3L_22_21150001	chr3L_21150001	D9
1750	chr3L	21243723	21243739	chr3L	21251311	21251327	412	7	7586	9.5	6.0	7.8	0.8	7604	chr3L	21243723	intron	Eip78C +	chr3L	21247525	intron	Eip78C +	chr3L	21251327	intron	Eip78C +	chr3L_7_21245001	chr3L_21245001	D9
1751	chr3L	21306126	21306176	chr3L	21315309	21315360	roo	18	9184	7.0	4.0	5.5	2.8	9234	chr3L	21306126	3` UTR	CG7632 +	chr3L	21310743	intron	Pc -	chr3L	21315360	3` UTR	Pc -	chr3L_18_21310001	chr3L_21310001	D9
1754	chr3L	22577598	22577643	chr3L	22582411	22582455	Doc	26	4813	12.0	11.0	11.5	2.1	4857	chr3L	22577598	intergenic	not near genes	chr3L	22580026	intergenic	not near genes	chr3L	22582455	3` UTR	CG14459 -	chr3L_26_22580001	chr3L_22580001	D9
1755	chr3L	22865965	22865999	chr3L	22867123	22867157	Doc	9	1158	6.5	3.0	4.8	1.6	1192	chr3L	22865965	intron	CG33170 +	chr3L	22866561	intron	CG33170 +	chr3L	22867157	intron	CG33170 +	chr3L_9_22865001	chr3L_22865001	D9
1757	chr3L	22989842	22989885	chr3L	22996841	22996884	297	19	6997	7.0	4.0	5.5	2.9	7042	chr3L	22989842	intergenic	not near genes	chr3L	22993363	intergenic	not near genes	chr3L	22996884	intergenic	not near genes	chr3L_19_22990001	chr3L_22990001	D9
1758	chr3L	24168763	24168822	chr3L	24176116	24176175	ZAM	43	7353	11.0	8.5	9.8	4.0	7412	chr3L	24168763	intron	Snap25 +	chr3L	24172469	intron	Snap25 +	chr3L	24176175	intron	Snap25 +	chr3L_43_24170001	chr3L_24170001	D9
1759	chr3L	24791876	24791912	chr3L	24796680	24796716	Doc	10	4804	4.5	1.5	3.0	2.5	4840	chr3L	24791876	intergenic	not near genes	chr3L	24794296	intergenic	not near genes	chr3L	24796716	intergenic	not near genes	chr3L_10_24790001	chr3L_24790001	D9
1765	chr3R	3989297	3989307	chr3R	4068941	4068951	mdg1	5	79644	33.5	12.5	23.0	0.2	79654	chr3R	3989297	intergenic	not near genes	chr3R	4029124	intergenic	not near genes	chr3R	4068951	intergenic	not near genes	chr3R_5_4025001	chr3R_4025001	D9
1767	chr3R	4887461	4887504	chr3R	4894861	4894903	rover	19	7400	9.0	10.0	9.5	1.8	7442	chr3R	4887461	intergenic	not near genes	chr3R	4891182	intergenic	not near genes	chr3R	4894903	intergenic	not near genes	chr3R_19_4890001	chr3R_4890001	D9
1768	chr3R	5045821	5045875	chr3R	5052948	5053002	HMS-Beagle	10	7127	7.0	3.0	5.0	1.7	7181	chr3R	5045821	3` UTR	CR43635 -	chr3R	5049412	intergenic	not near genes	chr3R	5053002	intergenic	CR45588 -	chr3R_10_5045001	chr3R_5045001	D9
1770	chr3R	5745989	5746044	chr3R	5746255	5746310	pogo	10	266	5.5	5.5	5.5	1.5	321	chr3R	5745989	3` UTR	Madm +	chr3R	5746150	3` UTR	Madm +	chr3R	5746310	3` UTR	Madm +	chr3R_10_5745001	chr3R_5745001	D9
1771	chr3R	5746998	5747032	chr3R	5753214	5753248	diver	7	6216	3.0	3.0	3.0	1.8	6250	chr3R	5746998	intergenic	Madm +	chr3R	5750123	intergenic	not near genes	chr3R	5753248	intergenic	CG2091 -	chr3R_7_5750001	chr3R_5750001	D9
1772	chr3R	5809104	5809142	chr3R	5809370	5809408	pogo	17	266	6.5	6.5	6.5	2.3	304	chr3R	5809104	3` UTR	CG11000 +	chr3R	5809256	3` UTR	CG11000 +	chr3R	5809408	3` UTR	CG11000 +	chr3R_17_5805001	chr3R_5805001	D9
1773	chr3R	5822362	5822402	chr3R	5823554	5823594	1360	13	1191	7.0	9.0	8.0	1.4	1232	chr3R	5822362	3` UTR	CG2023 -	chr3R	5822978	3` UTR	CG2023 -	chr3R	5823594	3` UTR	CG2023 -	chr3R_13_5820001	chr3R_5820001	D9
1777	chr3R	5927539	5927579	chr3R	5927804	5927844	pogo	23	264	6.0	3.5	4.8	4.0	305	chr3R	5927539	intron	CG34113 -	chr3R	5927692	intron	CG34113 -	chr3R	5927844	intron	CG34113 -	chr3R_23_5925001	chr3R_5925001	D9
1784	chr3R	6015940	6015994	chr3R	6024444	6024500	Tirant	30	8506	3.5	8.5	6.0	4.3	8560	chr3R	6015940	intergenic	not near genes	chr3R	6020220	intergenic	not near genes	chr3R	6024500	intergenic	not near genes	chr3R_30_6020001	chr3R_6020001	D9
1787	chr3R	6158487	6158533	chr3R	6167095	6167141	Tirant	13	8608	8.5	4.0	6.2	1.8	8654	chr3R	6158487	intergenic	not near genes	chr3R	6162814	intergenic	not near genes	chr3R	6167141	intergenic	CG1077 +	chr3R_13_6160001	chr3R_6160001	D9
1788	chr3R	6175147	6175199	chr3R	6182444	6182496	HMS-Beagle2	9	7297	4.0	3.5	3.8	1.9	7349	chr3R	6175147	intergenic	Osi1 +	chr3R	6178822	intron	CR45194 +	chr3R	6182496	intergenic	CR45194 +	chr3R_9_6175001	chr3R_6175001	D9
1791	chr3R	6206264	6206316	chr3R	6206505	6206558	BS	19	242	6.5	7.0	6.8	2.4	294	chr3R	6206264	exon	Osi24 +	chr3R	6206411	intron	Osi24 +	chr3R	6206558	intron	Osi24 +	chr3R_19_6205001	chr3R_6205001	D9
1794	chr3R	6510011	6510050	chr3R	6515117	6515156	jockey	7	5106	3.0	1.5	2.2	2.2	5145	chr3R	6510011	intergenic	not near genes	chr3R	6512584	intergenic	not near genes	chr3R	6515156	intergenic	not near genes	chr3R_7_6510001	chr3R_6510001	D9
1798	chr3R	6737479	6737524	chr3R	6739290	6739336	Doc	14	1811	4.0	7.5	5.8	2.1	1857	chr3R	6737479	intron	pb -	chr3R	6738408	intron	pb -	chr3R	6739336	intron	pb -	chr3R_14_6735001	chr3R_6735001	D9
1825	chr3R	7694561	7694593	chr3R	7713647	7713677	invader3	8	19086	4.5	1.0	2.8	2.1	19116	chr3R	7694561	3` UTR	Nlg1 +	chr3R	7704119	intergenic	not near genes	chr3R	7713677	intergenic	not near genes	chr3R_8_7700001	chr3R_7700001	D9
1826	chr3R	7729445	7729496	chr3R	7737407	7737459	Stalker2	8	7963	6.0	5.5	5.8	1.2	8014	chr3R	7729445	intergenic	not near genes	chr3R	7733452	intergenic	not near genes	chr3R	7737459	intergenic	not near genes	chr3R_8_7730001	chr3R_7730001	D9
1827	chr3R	7849618	7849671	chr3R	7850810	7850863	1360	5	1192	1.0	1.0	1.0	2.5	1245	chr3R	7849618	intron	CG34384 +	chr3R	7850240	intron	CG34384 +	chr3R	7850863	intron	CG34384 +	chr3R_5_7850001	chr3R_7850001	D9
1832	chr3R	7973325	7973348	chr3R	7974414	7974437	1360	7	1089	3.0	6.0	4.5	1.3	1112	chr3R	7973325	intergenic	not near genes	chr3R	7973881	intergenic	not near genes	chr3R	7974437	3` UTR	CD98hc -	chr3R_7_7970001	chr3R_7970001	D9
1837	chr3R	8090545	8090566	chr3R	8094047	8094068	297	9	3502	5.0	14.5	9.8	0.8	3523	chr3R	8090545	intergenic	CR44330 +	chr3R	8092306	intergenic	not near genes	chr3R	8094068	intergenic	CG7900 +	chr3R_9_8090001	chr3R_8090001	D9
1838	chr3R	8094390	8094434	chr3R	8099720	8099764	Transpac	18	5330	4.5	3.5	4.0	3.6	5374	chr3R	8094390	intron	CG7900 +	chr3R	8097077	intron	CG7900 +	chr3R	8099764	intron	CG7900 +	chr3R_18_8095001	chr3R_8095001	D9
1839	chr3R	8101737	8101788	chr3R	8104846	8104897	G2	22	3109	7.0	7.5	7.2	2.7	3160	chr3R	8101737	exon	CG7900 +	chr3R	8103317	intron	CG7900 +	chr3R	8104897	3` UTR	CG7900 +	chr3R_22_8100001	chr3R_8100001	D9
1841	chr3R	8207539	8207583	chr3R	8208409	8208453	F-element	16	870	4.0	5.0	4.5	2.9	914	chr3R	8207539	intergenic	not near genes	chr3R	8207996	intergenic	not near genes	chr3R	8208453	intergenic	not near genes	chr3R_16_8205001	chr3R_8205001	D9
1845	chr3R	8402983	8403035	chr3R	8412174	8412226	roo	31	9190	7.5	6.5	7.0	3.9	9243	chr3R	8402983	intron	CG45263 -	chr3R	8407604	intron	CG45263 -	chr3R	8412226	intron	CG45263 -	chr3R_31_8405001	chr3R_8405001	D9
1848	chr3R	8570461	8570491	chr3R	8575114	8575152	HMS-Beagle	8	4660	2.0	3.5	2.8	2.1	4691	chr3R	8570461	intergenic	not near genes	chr3R	8572806	intergenic	not near genes	chr3R	8575152	intergenic	not near genes	chr3R_8_8570001	chr3R_8570001	D9
1850	chr3R	8601747	8601796	chr3R	8610925	8610974	roo	13	9177	5.0	2.0	3.5	2.9	9227	chr3R	8601747	intron	5-HT2B +	chr3R	8606360	intron	5-HT2B +	chr3R	8610974	intron	5-HT2B +	chr3R_13_8605001	chr3R_8605001	D9
1852	chr3R	8707331	8707380	chr3R	8709797	8709846	jockey	18	2466	0.5	8.0	4.2	3.5	2515	chr3R	8707331	intergenic	not near genes	chr3R	8708588	intergenic	not near genes	chr3R	8709846	intergenic	not near genes	chr3R_18_8705001	chr3R_8705001	D9
1853	chr3R	8894892	8894895	chr3R	8896035	8896038	1360	4	1143	4.0	5.0	4.5	0.7	1146	chr3R	8894892	intron	pyd -	chr3R	8895465	intron	pyd -	chr3R	8896038	intron	pyd -	chr3R_4_8895001	chr3R_8895001	D9
1854	chr3R	8898198	8898211	chr3R	8913803	8913816	297	8	15606	16.5	9.0	12.8	0.6	15618	chr3R	8898198	intron	pyd -	chr3R	8906007	intron	pyd -	chr3R	8913816	intron	pyd -	chr3R_8_8905001	chr3R_8905001	D9
1866	chr3R	9278771	9278805	chr3R	9284056	9284090	Rt1a	11	5285	6.0	8.5	7.2	1.3	5319	chr3R	9278771	intergenic	not near genes	chr3R	9281430	intergenic	not near genes	chr3R	9284090	intergenic	not near genes	chr3R_11_9280001	chr3R_9280001	D9
1867	chr3R	9319563	9319598	chr3R	9320023	9320058	jockey	9	460	6.0	4.5	5.2	1.5	495	chr3R	9319563	intron	CG8861 -	chr3R	9319810	intron	CG8861 -	chr3R	9320058	intron	CG8861 -	chr3R_9_9315001	chr3R_9315001	D9
1868	chr3R	9361819	9361845	chr3R	9362085	9362110	pogo	6	266	2.0	3.5	2.8	1.6	291	chr3R	9361819	3` UTR	CG45050 +	chr3R	9361964	3` UTR	CG45050 +	chr3R	9362110	3` UTR	CG45050 +	chr3R_6_9360001	chr3R_9360001	D9
1875	chr3R	9699958	9699998	chr3R	9700072	9700112	1360	12	114	7.5	5.0	6.2	1.7	154	chr3R	9699958	intron	Unc-115a -	chr3R	9700035	intron	Unc-115a -	chr3R	9700112	intron	Unc-115a -	chr3R_12_9700001	chr3R_9700001	D9
1881	chr3R	10231763	10231804	chr3R	10237365	10237406	mdg3	9	5600	2.5	2.5	2.5	2.6	5643	chr3R	10231763	intron	CG42795 +	chr3R	10234584	intron	CG42795 +	chr3R	10237406	intron	CG42795 +	chr3R_9_10230001	chr3R_10230001	D9
1882	chr3R	10255358	10255382	chr3R	10260823	10260847	I-element	4	5465	4.5	6.5	5.5	0.6	5489	chr3R	10255358	3` UTR	Sirt6 -	chr3R	10258102	intron	Sirt6 -	chr3R	10260847	exon	Sirt6 -	chr3R_4_10255001	chr3R_10255001	D9
1891	chr3R	10804151	10804190	chr3R	10811708	10811747	17.6	9	7557	3.0	2.0	2.5	2.6	7596	chr3R	10804151	intergenic	CG14692 -	chr3R	10807949	intergenic	not near genes	chr3R	10811747	3` UTR	CG14693 -	chr3R_9_10805001	chr3R_10805001	D9
1894	chr3R	10957861	10957885	chr3R	10963263	10963287	Rt1c	14	5400	12.5	6.5	9.5	1.3	5426	chr3R	10957861	intergenic	not near genes	chr3R	10960574	intergenic	not near genes	chr3R	10963287	intergenic	not near genes	chr3R_14_10960001	chr3R_10960001	D9
1896	chr3R	11065578	11065596	chr3R	11071253	11071273	297	4	5674	2.5	2.5	2.5	1.1	5695	chr3R	11065578	intergenic	not near genes	chr3R	11068426	intergenic	not near genes	chr3R	11071273	intergenic	not near genes	chr3R_4_11065001	chr3R_11065001	D9
1907	chr3R	11379223	11379254	chr3R	11388401	11388432	roo	8	9179	6.5	9.5	8.0	0.9	9209	chr3R	11379223	intron	pros +	chr3R	11383828	intron	pros +	chr3R	11388432	intron	pros +	chr3R_8_11380001	chr3R_11380001	D9
1914	chr3R	11841047	11841093	chr3R	11846263	11846305	BS	23	5216	5.0	6.0	5.5	3.5	5258	chr3R	11841047	intron	CG6959 -	chr3R	11843676	intron	CG6959 -	chr3R	11846305	intron	CG6959 -	chr3R_23_11840001	chr3R_11840001	D9
1918	chr3R	12022861	12022915	chr3R	12025063	12025117	pogo	10	2202	0.5	4.5	2.5	2.9	2256	chr3R	12022861	intergenic	not near genes	chr3R	12023989	intergenic	not near genes	chr3R	12025117	intergenic	not near genes	chr3R_10_12020001	chr3R_12020001	D9
1943	chr3R	12920140	12920181	chr3R	12925368	12925409	copia	16	5228	6.0	8.0	7.0	2.0	5269	chr3R	12920140	intron	beat-Vb +	chr3R	12922774	intron	beat-Vb +	chr3R	12925409	intron	beat-Vb +	chr3R_16_12920001	chr3R_12920001	D9
1950	chr3R	13135820	13135857	chr3R	13138020	13138055	pogo	8	2200	6.0	4.5	5.2	1.3	2235	chr3R	13135820	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13136938	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13138055	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R_8_13135001	chr3R_13135001	D9
1951	chr3R	13143015	13143063	chr3R	13148616	13148658	mdg3	22	5600	9.0	10.0	9.5	2.1	5643	chr3R	13143015	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13145836	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13148658	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R_22_13145001	chr3R_13145001	D9
1956	chr3R	13314075	13314116	chr3R	13318889	13318929	Doc	8	4813	3.0	5.0	4.0	1.6	4854	chr3R	13314075	intergenic	not near genes	chr3R	13316502	intergenic	not near genes	chr3R	13318929	intergenic	CG45080 -	chr3R_8_13315001	chr3R_13315001	D9
1976	chr3R	14246370	14246418	chr3R	14247891	14247934	jockey	22	1519	9.5	1.5	5.5	3.4	1564	chr3R	14246370	intergenic	not near genes	chr3R	14247152	intergenic	not near genes	chr3R	14247934	intergenic	not near genes	chr3R_22_14245001	chr3R_14245001	D9
1993	chr3R	15059258	15059480	chr3R	15059477	15059592	BS	13	204	0.0	0.0	0.0	13.0	334	chr3R	15059258	intron	dpr9 -	chr3R	15059425	intron	dpr9 -	chr3R	15059592	intron	dpr9 -	chr3R_13_15055001	chr3R_15055001	D9
1995	chr3R	15079781	15079835	chr3R	15080047	15080100	pogo	8	265	3.0	1.0	2.0	2.7	319	chr3R	15079781	3` UTR	CG6966 -	chr3R	15079940	3` UTR	CG6966 -	chr3R	15080100	3` UTR	CG6966 -	chr3R_8_15075001	chr3R_15075001	D9
1998	chr3R	15102471	15102523	chr3R	15109753	15109801	412	10	7281	2.0	2.0	2.0	3.3	7330	chr3R	15102471	intron	CG42788 -	chr3R	15106136	intron	CG42788 -	chr3R	15109801	intron	CG42788 -	chr3R_10_15105001	chr3R_15105001	D9
1999	chr3R	15132040	15132075	chr3R	15135125	15135156	Juan	24	3084	18.0	12.0	15.0	1.5	3116	chr3R	15132040	intergenic	CG42788 -	chr3R	15133598	intergenic	not near genes	chr3R	15135156	3` UTR	CG6912 -	chr3R_24_15130001	chr3R_15130001	D9
2002	chr3R	15162519	15162547	chr3R	15167312	15167340	F-element	8	4793	5.5	1.5	3.5	1.8	4821	chr3R	15162519	intron	Gyc88E +	chr3R	15164930	intron	Gyc88E +	chr3R	15167340	intron	Gyc88E +	chr3R_8_15160001	chr3R_15160001	D9
2007	chr3R	15601150	15601194	chr3R	15608697	15608741	412	10	7547	4.5	4.5	4.5	1.8	7591	chr3R	15601150	intergenic	not near genes	chr3R	15604946	intergenic	not near genes	chr3R	15608741	intergenic	not near genes	chr3R_10_15600001	chr3R_15600001	D9
2008	chr3R	15618734	15618762	chr3R	15626231	15626261	blood	6	7498	0.5	7.5	4.0	1.2	7527	chr3R	15618734	intergenic	not near genes	chr3R	15622498	intergenic	not near genes	chr3R	15626261	intergenic	not near genes	chr3R_6_15620001	chr3R_15620001	D9
2018	chr3R	16756294	16756353	chr3R	16762510	16762556	diver	14	6214	4.5	5.5	5.0	2.3	6262	chr3R	16756294	intron	bxd -	chr3R	16759425	intron	bxd -	chr3R	16762556	intron	bxd -	chr3R_14_16755001	chr3R_16755001	D9
2021	chr3R	17294649	17294693	chr3R	17295102	17295146	BS	19	453	3.0	5.0	4.0	3.8	497	chr3R	17294649	intergenic	not near genes	chr3R	17294898	intergenic	not near genes	chr3R	17295146	intergenic	not near genes	chr3R_19_17290001	chr3R_17290001	D9
2031	chr3R	17591275	17591320	chr3R	17591733	17591781	F-element	16	460	6.0	6.0	6.0	2.3	506	chr3R	17591275	intergenic	not near genes	chr3R	17591528	intergenic	not near genes	chr3R	17591781	intergenic	not near genes	chr3R_16_17590001	chr3R_17590001	D9
2040	chr3R	17925835	17925875	chr3R	17927327	17927367	hobo	15	1492	7.5	5.5	6.5	2.0	1532	chr3R	17925835	intron	cpo +	chr3R	17926601	intron	cpo +	chr3R	17927367	intron	cpo +	chr3R_15_17925001	chr3R_17925001	D9
2042	chr3R	18032804	18032810	chr3R	18040501	18040508	opus	4	7698	0.5	5.5	3.0	1.0	7704	chr3R	18032804	intergenic	not near genes	chr3R	18036656	intergenic	not near genes	chr3R	18040508	intergenic	not near genes	chr3R_4_18035001	chr3R_18035001	D9
2057	chr3R	18606481	18606529	chr3R	18610738	18610786	F-element	7	4257	4.0	3.5	3.8	1.5	4305	chr3R	18606481	intron,intron	qin +,CG14304 -	chr3R	18608634	intron,intron	qin +,CG14304 -	chr3R	18610786	intron,intron	qin +,CG14304 -	chr3R_7_18605001	chr3R_18605001	D9
2066	chr3R	18934420	18934438	chr3R	18934522	18934538	roo	10	101	4.5	11.0	7.8	1.1	118	chr3R	18934420	intron	CG42613 +	chr3R	18934479	intron	CG42613 +	chr3R	18934538	intron	CG42613 +	chr3R_10_18930001	chr3R_18930001	D9
2069	chr3R	19193002	19193008	chr3R	19197279	19197337	F-element	12	4308	4.5	4.5	4.5	2.2	4335	chr3R	19193002	intron	CG31475 +	chr3R	19195170	intron	CG31475 +	chr3R	19197337	intron	CG31475 +	chr3R_12_19195001	chr3R_19195001	D9
2089	chr3R	20156679	20156718	chr3R	20165874	20165913	roo	10	9195	5.0	3.0	4.0	2.0	9234	chr3R	20156679	intergenic	not near genes	chr3R	20161296	intergenic	not near genes	chr3R	20165913	intergenic	not near genes	chr3R_10_20160001	chr3R_20160001	D9
2090	chr3R	20330984	20331028	chr3R	20331495	20331539	roo	4	511	2.5	3.5	3.0	1.0	555	chr3R	20330984	intergenic	Sirt2 +	chr3R	20331262	intergenic	Sirt2 +	chr3R	20331539	intergenic	not near genes	chr3R_4_20330001	chr3R_20330001	D9
2099	chr3R	20854447	20854510	chr3R	20859267	20859318	Doc	11	4817	0.0	3.5	1.8	3.9	4871	chr3R	20854447	intron	Ir93a -	chr3R	20856882	intron	Ir93a -	chr3R	20859318	exon	Ir93a -	chr3R_11_20855001	chr3R_20855001	D9
2108	chr3R	21141652	21141706	chr3R	21150158	21150210	Tirant	21	8505	6.5	11.5	9.0	2.1	8558	chr3R	21141652	intron	SNF4Agamma +	chr3R	21145931	intron	SNF4Agamma +	chr3R	21150210	intron	SNF4Agamma +	chr3R_21_21145001	chr3R_21145001	D9
2126	chr3R	21761098	21761150	chr3R	21768514	21768567	mdg1	37	7417	8.0	10.0	9.0	3.7	7469	chr3R	21761098	exon	CG42335 +	chr3R	21764832	intron	CG42335 +	chr3R	21768567	exon	CG42335 +	chr3R_37_21760001	chr3R_21760001	D9
2150	chr3R	22234661	22234712	chr3R	22236005	22236056	pogo	11	1344	1.0	2.0	1.5	4.4	1395	chr3R	22234661	intron	SKIP +	chr3R	22235358	intron	SKIP +	chr3R	22236056	intron	SKIP +	chr3R_11_22235001	chr3R_22235001	D9
2151	chr3R	22239475	22239524	chr3R	22248560	22248597	roo	12	9077	3.5	2.5	3.0	3.0	9122	chr3R	22239475	intron	SKIP +	chr3R	22244036	intron	SKIP +	chr3R	22248597	intron	SKIP +	chr3R_12_22240001	chr3R_22240001	D9
2157	chr3R	22450524	22450572	chr3R	22453186	22453237	NOF	21	2665	8.5	7.0	7.8	2.4	2713	chr3R	22450524	intron	CG34376 +	chr3R	22451880	intron	CG34376 +	chr3R	22453237	intron	CG34376 +	chr3R_21_22450001	chr3R_22450001	D9
2174	chr3R	23558388	23558428	chr3R	23560187	23560234	Bari1	12	1805	2.0	3.0	2.5	3.4	1846	chr3R	23558388	intron	beat-IV +	chr3R	23559311	intron	beat-IV +	chr3R	23560234	intron	beat-IV +	chr3R_12_23555001	chr3R_23555001	D9
2177	chr3R	23851065	23851081	chr3R	23858755	23858772	opus	5	7691	0.5	3.5	2.0	1.7	7707	chr3R	23851065	3` UTR	CG34355 +	chr3R	23854918	intergenic	not near genes	chr3R	23858772	intergenic	not near genes	chr3R_5_23850001	chr3R_23850001	D9
2183	chr3R	24072062	24072114	chr3R	24072525	24072572	jockey	10	462	7.5	0.0	3.8	2.1	510	chr3R	24072062	intron	4EHP -	chr3R	24072317	intron	4EHP -	chr3R	24072572	intron	4EHP -	chr3R_10_24070001	chr3R_24070001	D9
2184	chr3R	24076895	24076944	chr3R	24078387	24078436	hobo	22	1492	9.0	5.0	7.0	2.8	1541	chr3R	24076895	intron	4EHP -	chr3R	24077666	intron	4EHP -	chr3R	24078436	intron	4EHP -	chr3R_22_24075001	chr3R_24075001	D9
2187	chr3R	24207197	24207243	chr3R	24212298	24212344	flea	15	5101	11.0	12.0	11.5	1.2	5147	chr3R	24207197	intron	twin -	chr3R	24209770	intron	twin -	chr3R	24212344	intron	twin -	chr3R_15_24205001	chr3R_24205001	D9
2190	chr3R	24594653	24594663	chr3R	24594918	24594928	pogo	6	264	2.0	13.0	7.5	0.7	275	chr3R	24594653	intron	mld +	chr3R	24594790	intron	mld +	chr3R	24594928	intron	mld +	chr3R_6_24590001	chr3R_24590001	D9
2197	chr3R	24730076	24730097	chr3R	24732479	24732500	Doc	4	2403	9.0	0.0	4.5	0.7	2424	chr3R	24730076	intron	tok +	chr3R	24731288	intron	tok +	chr3R	24732500	intron	tok +	chr3R_4_24730001	chr3R_24730001	D9
2203	chr3R	24927107	24927148	chr3R	24931923	24931964	Doc	8	4816	6.0	7.5	6.8	1.0	4857	chr3R	24927107	intergenic	Trf4-2 +	chr3R	24929536	intergenic	not near genes	chr3R	24931964	intergenic	CG11771 +	chr3R_8_24925001	chr3R_24925001	D9
2220	chr3R	25725808	25725859	chr3R	25734993	25735043	roo	7	9185	3.5	2.0	2.8	1.8	9235	chr3R	25725808	intron	LpR2 -	chr3R	25730426	intron	LpR2 -	chr3R	25735043	intron	LpR2 -	chr3R_7_25730001	chr3R_25730001	D9
2223	chr3R	25832672	25832721	chr3R	25841879	25841922	roo	23	9206	6.5	5.0	5.8	3.4	9250	chr3R	25832672	exon	alpha4GT2 +	chr3R	25837297	intron	alpha4GT2 +	chr3R	25841922	exon	alpha4GT2 +	chr3R_23_25835001	chr3R_25835001	D9
2230	chr3R	26108802	26108818	chr3R	26117409	26117426	Tirant	7	8608	13.5	0.0	6.8	0.9	8624	chr3R	26108802	5` UTR	CG31324 +	chr3R	26113114	intron	CG31324 +	chr3R	26117426	intron	CG31324 +	chr3R_7_26110001	chr3R_26110001	D9
2234	chr3R	26376303	26376341	chr3R	26385486	26385526	roo	14	9184	2.5	0.5	1.5	5.6	9223	chr3R	26376303	intergenic	not near genes	chr3R	26380914	intergenic	not near genes	chr3R	26385526	intergenic	not near genes	chr3R_14_26380001	chr3R_26380001	D9
2236	chr3R	26510503	26510526	chr3R	26519581	26519606	roo	7	9079	3.5	2.0	2.8	1.8	9103	chr3R	26510503	intron	plum -	chr3R	26515054	intron	plum -	chr3R	26519606	intron,5` UTR	plum -,CR45226 +	chr3R_7_26515001	chr3R_26515001	D9
2238	chr3R	26558299	26558358	chr3R	26565637	26565695	Stalker4	24	7338	5.0	9.5	7.2	2.9	7396	chr3R	26558299	intron	scrib +	chr3R	26561997	intron	scrib +	chr3R	26565695	intron	scrib +	chr3R_24_26560001	chr3R_26560001	D9
2241	chr3R	26642711	26642754	chr3R	26643129	26643172	jockey	8	418	6.5	2.5	4.5	1.5	461	chr3R	26642711	intergenic	not near genes	chr3R	26642942	intergenic	not near genes	chr3R	26643172	intergenic	not near genes	chr3R_8_26640001	chr3R_26640001	D9
2245	chr3R	26810528	26810581	chr3R	26811038	26811091	roo	15	510	6.5	7.5	7.0	1.9	563	chr3R	26810528	intron	Tl +	chr3R	26810810	intron	Tl +	chr3R	26811091	intron	Tl +	chr3R_15_26810001	chr3R_26810001	D9
2250	chr3R	27007385	27007434	chr3R	27016545	27016594	roo	10	9159	2.5	1.0	1.8	3.6	9209	chr3R	27007385	intron	RYa-R +	chr3R	27011990	intron	RYa-R +	chr3R	27016594	intron	RYa-R +	chr3R_10_27010001	chr3R_27010001	D9
2254	chr3R	27140489	27140545	chr3R	27148124	27148180	412	16	7635	4.5	1.5	3.0	4.0	7691	chr3R	27140489	intron	CG6051 -	chr3R	27144334	intron	CG6051 -	chr3R	27148180	intron	CG6051 -	chr3R_16_27140001	chr3R_27140001	D9
2258	chr3R	27342770	27342825	chr3R	27351376	27351431	Tirant	14	8606	1.0	2.5	1.8	5.0	8661	chr3R	27342770	intron	CG42534 +	chr3R	27347100	intron	CG42534 +	chr3R	27351431	intron	CG42534 +	chr3R_14_27345001	chr3R_27345001	D9
2262	chr3R	27725545	27725604	chr3R	27731012	27731020	I-element	10	5462	2.5	5.5	4.0	2.0	5475	chr3R	27725545	intergenic	not near genes	chr3R	27728282	intergenic	not near genes	chr3R	27731020	intergenic	not near genes	chr3R_10_27725001	chr3R_27725001	D9
2266	chr3R	27856735	27856786	chr3R	27858243	27858293	hopper2	16	1507	6.0	2.5	4.2	3.1	1558	chr3R	27856735	intron	CG34353 -	chr3R	27857514	intron	CG34353 -	chr3R	27858293	intron	CG34353 -	chr3R_16_27855001	chr3R_27855001	D9
2267	chr3R	27862939	27862986	chr3R	27868269	27868316	Transpac	22	5328	5.5	5.0	5.2	3.5	5377	chr3R	27862939	intron	CG34353 -	chr3R	27865628	intron	CG34353 -	chr3R	27868316	intron	CG34353 -	chr3R_22_27865001	chr3R_27865001	D9
2268	chr3R	27875679	27875725	chr3R	27882759	27882805	297	14	7080	4.0	2.5	3.2	3.3	7126	chr3R	27875679	intron	CG34353 -	chr3R	27879242	intron	CG34353 -	chr3R	27882805	intron	CG34353 -	chr3R_14_27875001	chr3R_27875001	D9
2269	chr3R	28068474	28068518	chr3R	28073941	28073985	I-element	11	5467	0.0	4.5	2.2	3.4	5511	chr3R	28068474	intron	CG34362 +	chr3R	28071230	intron	CG34362 +	chr3R	28073985	intron	CG34362 +	chr3R_11_28070001	chr3R_28070001	D9
2271	chr3R	28173647	28173691	chr3R	28181102	28181143	mdg1	15	7454	4.5	3.0	3.8	3.1	7496	chr3R	28173647	intron	CG34354 +	chr3R	28177395	intron	CG34354 +	chr3R	28181143	intron	CG34354 +	chr3R_15_28175001	chr3R_28175001	D9
2274	chr3R	28253324	28253364	chr3R	28255853	28255899	jockey	12	2534	7.0	4.5	5.8	1.8	2575	chr3R	28253324	intergenic	not near genes	chr3R	28254612	intergenic	not near genes	chr3R	28255899	intergenic	not near genes	chr3R_12_28250001	chr3R_28250001	D9
2294	chr3R	28792846	28792895	chr3R	28797966	28798015	jockey	22	5120	4.5	3.5	4.0	4.4	5169	chr3R	28792846	intergenic	not near genes	chr3R	28795430	intergenic	not near genes	chr3R	28798015	intergenic	not near genes	chr3R_22_28795001	chr3R_28795001	D9
2303	chr3R	29079383	29079408	chr3R	29080780	29080805	NOF	9	1397	2.5	3.5	3.0	2.2	1422	chr3R	29079383	intron	CG11873 +	chr3R	29080094	intron	CG11873 +	chr3R	29080805	intron	CG11873 +	chr3R_9_29080001	chr3R_29080001	D9
2311	chr3R	29319807	29319855	chr3R	29320151	29320199	jockey	13	344	4.0	3.0	3.5	2.9	392	chr3R	29319807	intergenic	Cnx99A -	chr3R	29320003	intergenic	Cnx99A -	chr3R	29320199	intergenic	not near genes	chr3R_13_29320001	chr3R_29320001	D9
2315	chr3R	29406609	29406644	chr3R	29407920	29407936	jockey	17	1310	6.5	10.0	8.2	1.8	1327	chr3R	29406609	intron	Ptp99A +	chr3R	29407272	intron	Ptp99A +	chr3R	29407936	intron	Ptp99A +	chr3R_17_29405001	chr3R_29405001	D9
2329	chr3R	29738248	29738275	chr3R	29739740	29739767	hobo	6	1491	7.5	5.0	6.2	0.8	1519	chr3R	29738248	intergenic	CG1969 +,CG7598 +	chr3R	29739008	intron	CG1969 +	chr3R	29739767	5` UTR	CG1969 +	chr3R_6_29735001	chr3R_29735001	D9
2331	chr3R	29760353	29760388	chr3R	29761579	29761614	pogo	7	1226	2.0	0.0	1.0	3.5	1261	chr3R	29760353	intergenic	not near genes	chr3R	29760984	intergenic	not near genes	chr3R	29761614	intergenic	not near genes	chr3R_7_29760001	chr3R_29760001	D9
2333	chr3R	29881999	29882051	chr3R	29891181	29891233	roo	12	9182	6.0	5.0	5.5	1.8	9234	chr3R	29881999	intron	CG31038 +	chr3R	29886616	intron	CG31038 +	chr3R	29891233	intron	CG31038 +	chr3R_12_29885001	chr3R_29885001	D9
2338	chr3R	30084848	30084877	chr3R	30086340	30086366	hobo	17	1491	0.5	7.5	4.0	3.4	1518	chr3R	30084848	intron	sima +	chr3R	30085607	intron	sima +	chr3R	30086366	intron	sima +	chr3R_17_30085001	chr3R_30085001	D9
2341	chr3R	30238734	30238773	chr3R	30239923	30239959	1360	4	1189	5.5	0.0	2.8	1.1	1225	chr3R	30238734	intergenic	not near genes	chr3R	30239346	intergenic	not near genes	chr3R	30239959	intergenic	not near genes	chr3R_4_30235001	chr3R_30235001	D9
2343	chr3R	30317310	30317344	chr3R	30324918	30324961	roo	4	7615	3.5	3.5	3.5	0.9	7651	chr3R	30317310	intron	hdc +	chr3R	30321136	intron	hdc +	chr3R	30324961	intron	hdc +	chr3R_4_30320001	chr3R_30320001	D9
2345	chr3R	30375520	30375569	chr3R	30383168	30383217	412	7	7648	3.5	3.5	3.5	1.6	7697	chr3R	30375520	intergenic	not near genes	chr3R	30379368	intergenic	not near genes	chr3R	30383217	intergenic	not near genes	chr3R_7_30375001	chr3R_30375001	D9
2346	chr3R	30396195	30396240	chr3R	30404486	30404531	roo	17	8291	3.5	5.0	4.2	3.3	8336	chr3R	30396195	intergenic	not near genes	chr3R	30400363	intergenic	not near genes	chr3R	30404531	5` UTR	CR45570 +	chr3R_17_30400001	chr3R_30400001	D9
2349	chr3R	30480454	30480509	chr3R	30482945	30483002	jockey	28	2491	6.0	3.0	4.5	5.1	2548	chr3R	30480454	intron	PH4alphaEFB +	chr3R	30481728	intron	PH4alphaEFB +	chr3R	30483002	intron	PH4alphaEFB +	chr3R_28_30480001	chr3R_30480001	D9
2357	chr3R	30679493	30679551	chr3R	30686987	30687045	blood	10	7494	2.0	4.0	3.0	2.5	7552	chr3R	30679493	intergenic	not near genes	chr3R	30683269	intergenic	not near genes	chr3R	30687045	intergenic	not near genes	chr3R_10_30680001	chr3R_30680001	D9
2360	chr3R	30818786	30818822	chr3R	30820376	30820410	1360	9	1589	5.0	4.0	4.5	1.6	1624	chr3R	30818786	intron	cindr +	chr3R	30819598	intron	cindr +	chr3R	30820410	intron	cindr +	chr3R_9_30815001	chr3R_30815001	D9
2369	chr3R	31074205	31074256	chr3R	31081828	31081885	springer	11	7625	9.0	0.0	4.5	2.0	7680	chr3R	31074205	intron	Sox100B +	chr3R	31078045	intron	Sox100B +	chr3R	31081885	intron	Sox100B +	chr3R_11_31075001	chr3R_31075001	D9
2376	chr3R	31279355	31279400	chr3R	31285571	31285616	diver	10	6216	6.5	8.5	7.5	1.2	6261	chr3R	31279355	intergenic	not near genes	chr3R	31282486	intergenic	not near genes	chr3R	31285616	intergenic	not near genes	chr3R_10_31280001	chr3R_31280001	D9
2377	chr3R	31330399	31330409	chr3R	31335637	31335649	copia	9	5239	16.5	9.0	12.8	0.7	5250	chr3R	31330399	intron	CG34347 +	chr3R	31333024	intron	CG34347 +	chr3R	31335649	intron	CG34347 +	chr3R_9_31330001	chr3R_31330001	D9
2379	chr3R	31413075	31413099	chr3R	31418300	31418315	copia	8	5224	14.0	0.0	7.0	1.0	5240	chr3R	31413075	intron	Gprk2 +	chr3R	31415695	intron	Gprk2 +	chr3R	31418315	intron	Gprk2 +	chr3R_8_31415001	chr3R_31415001	D9
2388	chr3R	31691512	31691559	chr3R	31696303	31696350	Doc	24	4791	6.5	10.5	8.5	2.5	4838	chr3R	31691512	intergenic	not near genes	chr3R	31693931	intergenic	not near genes	chr3R	31696350	intergenic	not near genes	chr3R_24_31690001	chr3R_31690001	D9
2399	chr3R	31997983	31998022	chr3R	32005478	32005516	blood	11	7492	3.5	5.0	4.2	2.1	7533	chr3R	31997983	intron	heph -	chr3R	32001750	intron	heph -	chr3R	32005516	intron	heph -	chr3R_11_32000001	chr3R_32000001	D9
2402	chr4	76474	76504	chr4	81940	81972	I-element	4	5466	3.5	2.0	2.8	1.1	5498	chr4	76474	intron	pan +	chr4	79223	intron	pan +	chr4	81972	intron	pan +	chr4_4_75001	chr4_75001	D9
2404	chr4	671582	671616	chr4	680190	680224	Tirant	7	8608	4.5	5.0	4.8	1.2	8642	chr4	671582	intron	CG11360 +	chr4	675903	intron	CG11360 +	chr4	680224	intron	CG11360 +	chr4_7_675001	chr4_675001	D9
2406	chrX	827597	827620	chrX	835414	835437	roo	5	7817	2.5	4.0	3.2	1.2	7840	chrX	827597	intron	CG43867 -	chrX	831517	intron	CG43867 -	chrX	835437	intron	CG43867 -	chrX_5_830001	chrX_830001	D9
2407	chrX	906686	906733	chrX	908500	908547	S-element	20	1813	6.0	8.5	7.2	2.4	1861	chrX	906686	intron	CG43867 -	chrX	907616	intron	CG43867 -	chrX	908547	intron	CG43867 -	chrX_20_905001	chrX_905001	D9
2408	chrX	1063736	1063751	chrX	1072552	1072569	roo	4	8818	4.0	5.5	4.8	0.7	8833	chrX	1063736	intron	CR44779 +	chrX	1068152	intron	CR44779 +	chrX	1072569	intron	CR44779 +	chrX_4_1065001	chrX_1065001	D9
2409	chrX	1627970	1627974	chrX	1635461	1635467	gtwin	5	7493	8.0	7.5	7.8	0.6	7497	chrX	1627970	intron,intron	Mur2B -,br +	chrX	1631718	intron,intron	Mur2B -,br +	chrX	1635467	intron,intron	Mur2B -,br +	chrX_5_1630001	chrX_1630001	D9
2410	chrX	2308820	2308824	chrX	2317426	2317432	Tirant	7	8608	3.5	14.5	9.0	0.7	8612	chrX	2308820	intron	phl +	chrX	2313126	intron	phl +	chrX	2317432	intron	phl +	chrX_7_2310001	chrX_2310001	D9
2411	chrX	2399816	2399868	chrX	2408192	2408245	roo	35	8377	5.0	8.5	6.8	4.5	8429	chrX	2399816	intergenic	not near genes	chrX	2404030	intergenic	not near genes	chrX	2408245	intergenic	not near genes	chrX_35_2400001	chrX_2400001	D9
2413	chrX	2664371	2664407	chrX	2665542	2665578	1360	11	1171	3.0	3.0	3.0	2.8	1207	chrX	2664371	intron	sgg +	chrX	2664974	intron	sgg +	chrX	2665578	intron	sgg +	chrX_11_2660001	chrX_2660001	D9
2414	chrX	2844881	2844930	chrX	2852316	2852365	mdg1	5	7435	0.5	4.0	2.2	1.6	7484	chrX	2844881	intron	kirre +	chrX	2848623	intron	kirre +	chrX	2852365	intron	kirre +	chrX_5_2845001	chrX_2845001	D9
2421	chrX	3415014	3415043	chrX	3421224	3421253	3S18	7	6210	3.0	3.5	3.2	1.7	6239	chrX	3415014	intron,intron	CR44999 +,CG12535 -	chrX	3418134	intron,intron	CR44999 +,CG12535 -	chrX	3421253	intron,intron	CR44999 +,CG12535 -	chrX_7_3415001	chrX_3415001	D9
2425	chrX	3493065	3493114	chrX	3502249	3502298	roo	23	9184	6.0	6.0	6.0	3.3	9233	chrX	3493065	intron,intron	CR44999 +,Gas8 -	chrX	3497682	intron,intron	CR44999 +,Gas8 -	chrX	3502298	intron,intron	CR44999 +,Gas8 -	chrX_23_3495001	chrX_3495001	D9
2428	chrX	3597528	3597574	chrX	3619721	3619767	roo	18	22193	8.0	4.0	6.0	2.6	22239	chrX	3597528	intron	AstA-R1 +	chrX	3608648	intron	AstA-R1 +	chrX	3619767	intron	AstA-R1 +	chrX_18_3605001	chrX_3605001	D9
2433	chrX	3726738	3726776	chrX	3730160	3730196	NOF	13	3422	4.5	0.0	2.2	4.1	3458	chrX	3726738	intron	tlk +	chrX	3728467	intron	tlk +	chrX	3730196	intron	tlk +	chrX_13_3725001	chrX_3725001	D9
2437	chrX	3842326	3842353	chrX	3842569	3842596	pogo	11	243	5.5	4.0	4.8	1.9	270	chrX	3842326	intron	ec +	chrX	3842461	intron	ec +	chrX	3842596	intron	ec +	chrX_11_3840001	chrX_3840001	D9
2445	chrX	3986839	3986890	chrX	3994497	3994548	412	13	7658	3.5	6.5	5.0	2.2	7709	chrX	3986839	intergenic	not near genes	chrX	3990694	intergenic	not near genes	chrX	3994548	intergenic	not near genes	chrX_13_3990001	chrX_3990001	D9
2454	chrX	4157873	4157922	chrX	4164951	4165000	297	16	7078	8.5	6.0	7.2	2.0	7127	chrX	4157873	intron	Fas2 -	chrX	4161436	intron	Fas2 -	chrX	4165000	intron	Fas2 -	chrX_16_4160001	chrX_4160001	D9
2470	chrX	4792365	4792398	chrX	4792820	4792856	jockey	13	458	6.0	5.5	5.8	1.9	491	chrX	4792365	intergenic	not near genes	chrX	4792610	intergenic	not near genes	chrX	4792856	intergenic	not near genes	chrX_13_4790001	chrX_4790001	D9
2471	chrX	4827947	4827996	chrX	4835343	4835390	Stalker4	14	7394	5.0	9.5	7.2	1.7	7443	chrX	4827947	intergenic	not near genes	chrX	4831668	intergenic	not near genes	chrX	4835390	intergenic	not near genes	chrX_14_4830001	chrX_4830001	D9
2476	chrX	4990021	4990075	chrX	4997260	4997314	roo	13	7238	4.5	5.0	4.8	2.2	7293	chrX	4990021	intron	CR44833 -	chrX	4993668	intron	CR44833 -	chrX	4997314	intron	CR44833 -	chrX_13_4990001	chrX_4990001	D9
2478	chrX	5096253	5096305	chrX	5103842	5103893	springer	14	7590	7.0	8.5	7.8	1.6	7640	chrX	5096253	intron,intron	CG15465 +,rg +	chrX	5100073	intron,intron	CG15465 +,rg +	chrX	5103893	intron,intron	CG15465 +,rg +	chrX_14_5100001	chrX_5100001	D9
2480	chrX	5338682	5338733	chrX	5339960	5340011	jockey	17	1278	5.0	8.0	6.5	2.3	1329	chrX	5338682	intergenic	not near genes	chrX	5339346	intergenic	not near genes	chrX	5340011	intergenic	SK +	chrX_17_5335001	chrX_5335001	D9
2484	chrX	5481065	5481092	chrX	5485058	5485083	I-element	5	3991	1.5	6.5	4.0	1.0	4018	chrX	5481065	intron	SPR +	chrX	5483074	intron	SPR +	chrX	5485083	intron	SPR +	chrX_5_5480001	chrX_5480001	D9
2486	chrX	5524818	5524853	chrX	5528702	5528741	412	6	3885	8.5	3.0	5.8	0.9	3923	chrX	5524818	intergenic	snoRNA:Psi28S-3342 -	chrX	5526780	intergenic	not near genes	chrX	5528741	intergenic	Vsx2 -	chrX_6_5525001	chrX_5525001	D9
2487	chrX	5727399	5727413	chrX	5732163	5732177	Doc	4	4764	6.0	4.5	5.2	0.6	4778	chrX	5727399	intron	CG32758 -	chrX	5729788	intron	CG32758 -	chrX	5732177	intron	CG32758 -	chrX_4_5725001	chrX_5725001	D9
2488	chrX	6335216	6335242	chrX	6337750	6337777	Tirant	5	2535	0.5	7.5	4.0	1.0	2561	chrX	6335216	intergenic	not near genes	chrX	6336496	intergenic	not near genes	chrX	6337777	5` UTR	CG3842 +	chrX_5_6335001	chrX_6335001	D9
2491	chrX	6429982	6429988	chrX	6435480	6435486	Rt1c	5	5498	10.0	19.5	14.8	0.3	5504	chrX	6429982	intron	CG42340 -	chrX	6432734	intron	CG42340 -	chrX	6435486	intron	CG42340 -	chrX_5_6430001	chrX_6430001	D9
2493	chrX	6562796	6562848	chrX	6571302	6571354	Tirant	26	8506	6.5	12.5	9.5	2.5	8558	chrX	6562796	intron	CG34417 +	chrX	6567075	intron	CG34417 +	chrX	6571354	intron	CG34417 +	chrX_26_6565001	chrX_6565001	D9
2496	chrX	6605457	6605504	chrX	6608504	6608551	Burdock	5	3047	1.5	3.0	2.2	1.6	3094	chrX	6605457	intron	pigs +	chrX	6607004	intron	pigs +	chrX	6608551	intron	pigs +	chrX_5_6605001	chrX_6605001	D9
2508	chrX	7023579	7023624	chrX	7030994	7031039	Tabor	13	7415	8.0	4.0	6.0	1.9	7460	chrX	7023579	intron	CG12541 -	chrX	7027309	intron	CG12541 -	chrX	7031039	intron	CG12541 -	chrX_13_7025001	chrX_7025001	D9
2509	chrX	7125225	7125269	chrX	7134409	7134453	roo	21	9184	1.0	5.0	3.0	5.2	9228	chrX	7125225	intergenic	not near genes	chrX	7129839	intergenic	not near genes	chrX	7134453	intergenic	not near genes	chrX_21_7125001	chrX_7125001	D9
2517	chrX	8031404	8031450	chrX	8035738	8035784	Juan	11	4334	8.5	8.0	8.2	1.2	4380	chrX	8031404	intergenic	not near genes	chrX	8033594	intergenic	not near genes	chrX	8035784	3` UTR	CG2233 -	chrX_11_8030001	chrX_8030001	D9
2518	chrX	8364831	8364879	chrX	8365253	8365316	BS	5	435	2.0	0.0	1.0	2.5	485	chrX	8364831	intron	nAChRalpha3 -	chrX	8365074	intron	nAChRalpha3 -	chrX	8365316	intron	nAChRalpha3 -	chrX_5_8365001	chrX_8365001	D9
2524	chrX	8922306	8922357	chrX	8922765	8922816	jockey	31	459	8.0	7.0	7.5	3.6	510	chrX	8922306	intron	rdgA +	chrX	8922561	intron	rdgA +	chrX	8922816	intron	rdgA +	chrX_31_8920001	chrX_8920001	D9
2525	chrX	8927573	8927611	chrX	8929868	8929906	NOF	13	2295	4.0	4.5	4.2	2.5	2333	chrX	8927573	intron	rdgA +	chrX	8928740	intron	rdgA +	chrX	8929906	intron	rdgA +	chrX_13_8925001	chrX_8925001	D9
2526	chrX	8948741	8948789	chrX	8956276	8956324	roo	15	7535	3.0	2.0	2.5	4.3	7583	chrX	8948741	intron	rdgA +	chrX	8952532	intron	rdgA +	chrX	8956324	intron	rdgA +	chrX_15_8950001	chrX_8950001	D9
2533	chrX	9508119	9508156	chrX	9509662	9509699	jockey	10	1543	10.0	8.5	9.2	1.0	1580	chrX	9508119	intron	CG32700 -	chrX	9508909	intron	CG32700 -	chrX	9509699	intron	CG32700 -	chrX_10_9505001	chrX_9505001	D9
2536	chrX	9575766	9575822	chrX	9576115	9576167	mdg3	37	348	12.0	12.0	12.0	2.8	401	chrX	9575766	intron,exon	CG32699 -,CG42395 -	chrX	9575966	intron,intron	CG32699 -,CG42395 -	chrX	9576167	intron,5` UTR	CG32699 -,CG42395 -	chrX_37_9575001	chrX_9575001	D9
2544	chrX	10138190	10138233	chrX	10145719	10145762	412	7	7528	6.5	2.0	4.2	1.3	7572	chrX	10138190	intron,intron	RhoU +,CR44894 -	chrX	10141976	intron,intron	RhoU +,CR44894 -	chrX	10145762	intron,intron	RhoU +,CR44894 -	chrX_7_10140001	chrX_10140001	D9
2552	chrX	10348778	10348820	chrX	10356368	10356410	springer	7	7586	7.0	5.0	6.0	1.0	7632	chrX	10348778	intergenic	snoRNA:U3:9B +	chrX	10352594	intergenic	not near genes	chrX	10356410	intergenic	l(1)G0289 -	chrX_7_10350001	chrX_10350001	D9
2555	chrX	10550831	10550885	chrX	10552323	10552377	hobo	22	1491	5.0	8.0	6.5	2.9	1546	chrX	10550831	intron	spri -	chrX	10551604	intron	spri -	chrX	10552377	intron	spri -	chrX_22_10550001	chrX_10550001	D9
2559	chrX	10686027	10686079	chrX	10691189	10691241	roo	16	5162	1.5	8.0	4.8	2.8	5214	chrX	10686027	intron	X11Lbeta +	chrX	10688634	intron	X11Lbeta +	chrX	10691241	intron	X11Lbeta +	chrX_16_10685001	chrX_10685001	D9
2563	chrX	10772649	10772698	chrX	10772757	10772806	Tirant	44	107	10.5	5.5	8.0	4.9	157	chrX	10772649	intron	CG15211 +	chrX	10772728	intron	CG15211 +	chrX	10772806	intron	CG15211 +	chrX_44_10770001	chrX_10770001	D9
2570	chrX	11095978	11096019	chrX	11103105	11103146	HMS-Beagle	9	7124	6.0	7.0	6.5	1.2	7168	chrX	11095978	intergenic	not near genes	chrX	11099562	intergenic	not near genes	chrX	11103146	intron	CG42249 +	chrX_9_11095001	chrX_11095001	D9
2572	chrX	11184221	11184279	chrX	11189325	11189380	flea	7	5102	7.5	7.0	7.2	0.9	5159	chrX	11184221	intergenic	not near genes	chrX	11186800	intergenic	not near genes	chrX	11189380	intergenic	not near genes	chrX_7_11185001	chrX_11185001	D9
2574	chrX	11194449	11194456	chrX	11201861	11201902	gypsy5	5	7439	13.5	18.0	15.8	0.3	7453	chrX	11194449	intergenic	not near genes	chrX	11198176	intergenic	not near genes	chrX	11201902	intergenic	CG11106 +	chrX_5_11195001	chrX_11195001	D9
2577	chrX	11268535	11268596	chrX	11270053	11270107	hopper2	37	1517	1.5	8.5	5.0	6.2	1572	chrX	11268535	intron	CG44422 -	chrX	11269321	intron	CG44422 -	chrX	11270107	intron	CG44422 -	chrX_37_11265001	chrX_11265001	D9
2579	chrX	11312046	11312086	chrX	11319424	11319464	Stalker2	17	7378	5.5	7.5	6.5	2.3	7418	chrX	11312046	intergenic	not near genes	chrX	11315755	intergenic	not near genes	chrX	11319464	intergenic	not near genes	chrX_17_11315001	chrX_11315001	D9
2584	chrX	2873132	2873160	chrX	11387650	11387676	roo	9	8514516	15.0	26.0	20.5	0.4	8514544	chrX	2873132	intron	kirre +	chrX	7130404	intergenic	not near genes	chrX	11387676	intron	dlg1 +	chrX_9_7130001	chrX_7130001	D9
2586	chrX	11535021	11535040	chrX	11541515	11541535	Burdock	8	6494	10.0	4.5	7.2	1.0	6514	chrX	11535021	intron	Drak +	chrX	11538278	intron	Drak +	chrX	11541535	intron	Drak +	chrX_8_11535001	chrX_11535001	D9
2587	chrX	11633400	11633446	chrX	11640479	11640525	297	18	7079	4.0	5.0	4.5	3.3	7125	chrX	11633400	intron	Ptp10D +	chrX	11636962	intron	Ptp10D +	chrX	11640525	intron	Ptp10D +	chrX_18_11635001	chrX_11635001	D9
2592	chrX	12168117	12168151	chrX	12173584	12173618	I-element	8	5467	6.0	3.0	4.5	1.5	5501	chrX	12168117	intron	Ten-a +	chrX	12170868	intron	Ten-a +	chrX	12173618	intron	Ten-a +	chrX_8_12170001	chrX_12170001	D9
2600	chrX	12381855	12381897	chrX	12385782	12385824	flea	15	3927	1.0	6.0	3.5	3.3	3969	chrX	12381855	intergenic	not near genes	chrX	12383840	intergenic	not near genes	chrX	12385824	intergenic	not near genes	chrX_15_12380001	chrX_12380001	D9
2620	chrX	13401464	13401511	chrX	13401841	13401888	jockey	4	377	3.0	2.0	2.5	1.1	424	chrX	13401464	intergenic	CG1673 +,CG12725 -	chrX	13401676	intergenic	CG12725 -,CG1673 +	chrX	13401888	3` UTR	CG12725 -	chrX_4_13400001	chrX_13400001	D9
2621	chrX	13429442	13429481	chrX	13430616	13430655	jockey	5	1169	1.0	4.5	2.8	1.3	1213	chrX	13429442	intergenic	not near genes	chrX	13430048	intergenic	not near genes	chrX	13430655	intergenic	not near genes	chrX_5_13430001	chrX_13430001	D9
2623	chrX	13463632	13463675	chrX	13469234	13469277	mdg3	5	5602	3.5	2.0	2.8	1.3	5645	chrX	13463632	intron	Neto +	chrX	13466454	intron	Neto +	chrX	13469277	intron	Neto +	chrX_5_13465001	chrX_13465001	D9
2631	chrX	13937954	13937991	chrX	13941250	13941287	I-element	8	3296	1.5	1.5	1.5	3.2	3333	chrX	13937954	intron	mamo -	chrX	13939620	intron	mamo -	chrX	13941287	intron	mamo -	chrX_8_13935001	chrX_13935001	D9
2632	chrX	14105005	14105050	chrX	14114181	14114226	roo	14	9176	4.0	5.0	4.5	2.5	9221	chrX	14105005	intergenic	not near genes	chrX	14109616	intergenic	not near genes	chrX	14114226	5` UTR	CR44657 +	chrX_14_14105001	chrX_14105001	D9
2644	chrX	14636444	14636484	chrX	14641910	14641950	I-element	13	5466	5.0	4.0	4.5	2.4	5506	chrX	14636444	intron	NetA -	chrX	14639197	intron	NetA -	chrX	14641950	intron	NetA -	chrX_13_14635001	chrX_14635001	D9
2646	chrX	14778023	14778050	chrX	14782845	14782872	Doc	7	4822	0.5	4.5	2.5	2.0	4849	chrX	14778023	intergenic	CG5347 +	chrX	14780448	intergenic	not near genes	chrX	14782872	intergenic	Ag5r2 -	chrX_7_14780001	chrX_14780001	D9
2647	chrX	14818741	14818791	chrX	14823970	14824020	copia	15	5229	5.0	5.5	5.2	2.4	5279	chrX	14818741	intron	rut -	chrX	14821380	intron	rut -	chrX	14824020	intron	rut -	chrX_15_14820001	chrX_14820001	D9
2648	chrX	14936843	14936873	chrX	14946125	14946155	roo	5	9282	3.5	1.0	2.2	1.6	9312	chrX	14936843	intron	pdgy -	chrX	14941499	intron	pdgy -	chrX	14946155	intron	pdgy -	chrX_5_14940001	chrX_14940001	D9
2653	chrX	15273683	15273731	chrX	15274874	15274915	1360	29	1191	5.5	10.0	7.8	3.3	1232	chrX	15273683	intergenic	not near genes	chrX	15274299	intergenic	not near genes	chrX	15274915	intergenic	not near genes	chrX_29_15270001	chrX_15270001	D9
2656	chrX	15413036	15413076	chrX	15417363	15417403	Juan	18	4327	7.5	5.5	6.5	2.4	4367	chrX	15413036	intron	Cngl -	chrX	15415220	intron	Cngl -	chrX	15417403	intron	Cngl -	chrX_18_15415001	chrX_15415001	D9
2658	chrX	15435688	15435703	chrX	15436143	15436161	rover	9	457	0.5	11.0	5.8	1.3	473	chrX	15435688	intron	Cngl -	chrX	15435924	intron	Cngl -	chrX	15436161	intron	Cngl -	chrX_9_15435001	chrX_15435001	D9
2669	chrX	16222766	16222806	chrX	16231141	16231181	roo	4	8375	0.5	1.5	1.0	2.0	8415	chrX	16222766	intergenic	not near genes	chrX	16226974	intergenic	not near genes	chrX	16231181	intergenic	not near genes	chrX_4_16225001	chrX_16225001	D9
2674	chrX	16492627	16492674	chrX	16498229	16498276	mdg3	12	5602	2.0	6.5	4.2	2.3	5649	chrX	16492627	intron	para -	chrX	16495452	intron	para -	chrX	16498276	exon	para -	chrX_12_16495001	chrX_16495001	D9
2680	chrX	16936012	16936026	chrX	16936452	16936469	jockey	7	442	2.5	9.5	6.0	1.0	457	chrX	16936012	intron	CG4928 +	chrX	16936240	intron	CG4928 +	chrX	16936469	intron	CG4928 +	chrX_7_16935001	chrX_16935001	D9
2684	chrX	17195212	17195236	chrX	17200321	17200345	flea	4	5106	2.5	1.0	1.8	1.4	5133	chrX	17195212	3` UTR	baz +	chrX	17197778	3` UTR	baz +	chrX	17200345	3` UTR	baz +	chrX_4_17195001	chrX_17195001	D9
2693	chrX	17431329	17431339	chrX	17431695	17431705	jockey	8	366	15.5	6.5	11.0	0.7	376	chrX	17431329	intron	CG12994 -	chrX	17431517	intron	CG12994 -	chrX	17431705	intron	CG12994 -	chrX_8_17430001	chrX_17430001	D9
2698	chrX	17556921	17556931	chrX	17557442	17557455	mdg1	5	523	13.0	4.0	8.5	0.5	534	chrX	17556921	intron	CG43658 -	chrX	17557188	intron	CG43658 -	chrX	17557455	intron	CG43658 -	chrX_5_17555001	chrX_17555001	D9
2705	chrX	17792931	17792975	chrX	17796254	17796298	flea	9	3322	4.0	4.0	4.0	1.8	3367	chrX	17792931	intron	OdsH +	chrX	17794614	intron	OdsH +	chrX	17796298	intron	OdsH +	chrX_9_17790001	chrX_17790001	D9
2709	chrX	18194043	18194099	chrX	18194601	18194652	BS	13	559	5.0	4.0	4.5	2.4	609	chrX	18194043	intron	Frq2 +	chrX	18194348	intron	Frq2 +	chrX	18194652	intron	Frq2 +	chrX_13_18190001	chrX_18190001	D9
2714	chrX	18429470	18429516	chrX	18434806	18434852	Transpac	11	5335	5.5	4.5	5.0	1.8	5382	chrX	18429470	intergenic	not near genes	chrX	18432161	intergenic	not near genes	chrX	18434852	intergenic	not near genes	chrX_11_18430001	chrX_18430001	D9
2725	chrX	18754311	18754342	chrX	18758003	18758034	297	11	3693	3.0	5.0	4.0	2.2	3723	chrX	18754311	intergenic	not near genes	chrX	18756172	intergenic	not near genes	chrX	18758034	intergenic	not near genes	chrX_11_18755001	chrX_18755001	D9
2732	chrX	19136531	19136564	chrX	19143475	19143509	412	6	6944	3.5	2.0	2.8	1.6	6978	chrX	19136531	intergenic	not near genes	chrX	19140020	intergenic	not near genes	chrX	19143509	3` UTR	RhoGAP18B -	chrX_6_19140001	chrX_19140001	D9
2734	chrX	19380136	19380185	chrX	19380402	19380451	pogo	7	266	1.0	1.5	1.2	3.2	315	chrX	19380136	intron	kek5 +	chrX	19380294	intron	kek5 +	chrX	19380451	intron	kek5 +	chrX_7_19380001	chrX_19380001	D9
2736	chrX	19472098	19472153	chrX	19472692	19472748	jockey	6	593	1.0	4.0	2.5	1.7	650	chrX	19472098	intergenic	kek5 +	chrX	19472423	intergenic	not near genes	chrX	19472748	intergenic	not near genes	chrX_6_19470001	chrX_19470001	D9
2738	chrX	19710063	19710098	chrX	19711863	19711909	S-element	24	1810	8.5	15.5	12.0	1.8	1846	chrX	19710063	intron	meso18E -	chrX	19710986	intron	meso18E -	chrX	19711909	intron	meso18E -	chrX_24_19710001	chrX_19710001	D9
2757	chrX	20377327	20377340	chrX	20378819	20378832	hobo	4	1492	7.0	21.5	14.2	0.3	1505	chrX	20377327	intergenic	not near genes	chrX	20378080	intergenic	not near genes	chrX	20378832	intergenic	not near genes	chrX_4_20375001	chrX_20375001	D9
2761	chrX	20504105	20504143	chrX	20505648	20505689	transib2	7	1545	6.0	4.5	5.2	1.1	1584	chrX	20504105	intron	RhoGAP19D -	chrX	20504897	intron	RhoGAP19D -	chrX	20505689	intron	RhoGAP19D -	chrX_7_20500001	chrX_20500001	D9
2773	chrX	20836712	20836751	chrX	20844339	20844378	roo	4	7627	1.0	5.5	3.2	1.0	7666	chrX	20836712	intron	shakB -	chrX	20840545	intron	shakB -	chrX	20844378	intron	shakB -	chrX_4_20840001	chrX_20840001	D9
2775	chrX	20940699	20940740	chrX	20942193	20942234	hobo	15	1494	6.0	7.5	6.8	1.9	1535	chrX	20940699	intergenic	not near genes	chrX	20941466	intergenic	not near genes	chrX	20942234	intergenic	not near genes	chrX_15_20940001	chrX_20940001	D9
2781	chrX	21086111	21086155	chrX	21087165	21087209	jockey	7	1054	2.5	3.0	2.8	1.8	1098	chrX	21086111	intergenic	not near genes	chrX	21086660	intergenic	not near genes	chrX	21087209	intergenic	not near genes	chrX_7_21085001	chrX_21085001	D9
2797	chrX	21458692	21458724	chrX	21464153	21464183	Ivk	5	5460	0.5	5.0	2.8	1.3	5491	chrX	21458692	intergenic	not near genes	chrX	21461438	intergenic	not near genes	chrX	21464183	intergenic	not near genes	chrX_5_21460001	chrX_21460001	D9
2798	chrX	21474383	21474435	chrX	21474774	21474826	1731	21	391	5.5	6.0	5.8	3.1	443	chrX	21474383	intergenic	not near genes	chrX	21474604	intergenic	not near genes	chrX	21474826	intergenic	not near genes	chrX_21_21470001	chrX_21470001	D9
2802	chrX	22522612	22522644	chrX	22525457	22525489	NOF	6	2845	2.0	2.5	2.2	1.9	2877	chrX	22522612	intron	CG17600 +	chrX	22524050	intron	CG17600 +	chrX	22525489	intron	CG17600 +	chrX_6_22520001	chrX_22520001	D9
2806	chrX	22697472	22697502	chrX	22701792	22701824	Juan	8	4321	8.5	2.5	5.5	1.2	4352	chrX	22697472	intron	CR44997 +	chrX	22699648	intron	CR44997 +	chrX	22701824	intron	CR44997 +	chrX_8_22695001	chrX_22695001	D9
2807	chrX	22771480	22771529	chrX	22774796	22774845	297	11	3316	5.0	2.0	3.5	2.4	3365	chrX	22771480	intron	CR44997 +	chrX	22773162	intron	CR44997 +	chrX	22774845	intron	CR44997 +	chrX_11_22770001	chrX_22770001	D9
2809	chrX	22811974	22812004	chrX	22816771	22816801	F-element	11	4797	7.0	5.0	6.0	1.6	4827	chrX	22811974	intergenic	CG12446 -	chrX	22814388	intergenic	not near genes	chrX	22816801	intergenic	not near genes	chrX_11_22810001	chrX_22810001	D9
2814	chrX	22987080	22987132	chrX	22989764	22989816	Burdock	8	2683	1.5	1.0	1.2	3.6	2736	chrX	22987080	intron,intron	stnA -,stnB -	chrX	22988448	intron,intron	stnA -,stnB -	chrX	22989816	intron,intron	stnA -,stnB -	chrX_8_22985001	chrX_22985001	D9
2815	chrX	22996289	22996336	chrX	23003546	23003593	roo	7	7257	1.0	2.5	1.8	2.5	7304	chrX	22996289	intron,intron	stnA -,stnB -	chrX	22999941	intron,intron	stnA -,stnB -	chrX	23003593	intron,intron	stnA -,stnB -	chrX_7_22995001	chrX_22995001	D9