SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 47442 47481 chr2L 52572 52610 jockey 11 5130 9.0 7.0 8.0 1.2 5168 chr2L 47442 intron Cda5 - chr2L 50026 intron Cda5 - chr2L 52610 intron Cda5 - chr2L_11_50001 chr2L_50001 D9 2 chr2L 53335 53380 chr2L 53517 53562 10 182 4.5 5.5 5.0 1.7 227 chr2L 53335 intron Cda5 - chr2L 53448 intron Cda5 - chr2L 53562 intron Cda5 - chr2L_10_50001 chr2L_50001 D9 3 chr2L 129437 129479 chr2L 133963 134007 10 4526 32.5 22.0 27.2 0.4 4570 chr2L 129437 intron,intron CG11455 +,CG3164 - chr2L 131722 intron CG11455 + chr2L 134007 intron,3` UTR CG11455 +,Gs1 + chr2L_10_130001 chr2L_130001 D9 4 chr2L 134124 134166 chr2L 134232 134275 11 107 2.0 0.0 1.0 5.5 151 chr2L 134124 intron,3` UTR CG11455 +,Gs1 + chr2L 134200 intron,3` UTR CG11455 +,Gs1 + chr2L 134275 intron,3` UTR CG11455 +,Gs1 + chr2L_11_130001 chr2L_130001 D9 5 chr2L 172033 172084 chr2L 172139 172190 8 106 2.0 4.0 3.0 2.0 157 chr2L 172033 intron spen + chr2L 172112 intron spen + chr2L 172190 intron spen + chr2L_8_170001 chr2L_170001 D9 6 chr2L 179439 179485 chr2L 179543 179593 21 107 5.5 7.5 6.5 2.8 154 chr2L 179439 intron spen + chr2L 179516 intron spen + chr2L 179593 intron spen + chr2L_21_175001 chr2L_175001 D9 7 chr2L 300774 300831 chr2L 300876 300933 19 102 4.0 3.0 3.5 4.2 159 chr2L 300774 intron Pi3K21B + chr2L 300854 intron Pi3K21B + chr2L 300933 intron Pi3K21B + chr2L_19_300001 chr2L_300001 D9 8 chr2L 307201 307257 chr2L 307377 307430 25 176 10.0 5.5 7.8 2.8 229 chr2L 307201 intron Plc21C + chr2L 307316 intron Plc21C + chr2L 307430 intron Plc21C + chr2L_25_305001 chr2L_305001 D9 9 chr2L 325112 325146 chr2L 325212 325248 20 102 10.0 12.5 11.2 1.6 136 chr2L 325112 intron Plc21C + chr2L 325180 intron Plc21C + chr2L 325248 intron Plc21C + chr2L_20_325001 chr2L_325001 D9 10 chr2L 347867 347913 chr2L 355392 355438 blood 12 7525 2.5 2.5 2.5 3.4 7571 chr2L 347867 3` UTR Plc21C + chr2L 351652 intron Plc21C + chr2L 355438 3` UTR Plc21C + chr2L_12_350001 chr2L_350001 D9 11 chr2L 371424 371451 chr2L 371528 371555 6 104 6.5 7.0 6.8 0.8 131 chr2L 371424 intergenic not near genes chr2L 371490 intergenic not near genes chr2L 371555 intergenic not near genes chr2L_6_370001 chr2L_370001 D9 12 chr2L 407928 407973 chr2L 408034 408079 7 103 2.0 3.0 2.5 2.0 151 chr2L 407928 3` UTR RpI135 + chr2L 408004 intergenic AP-2alpha -,RpI135 + chr2L 408079 3` UTR AP-2alpha - chr2L_7_405001 chr2L_405001 D9 13 chr2L 467337 467362 chr2L 467461 467478 9 123 11.0 9.0 10.0 0.8 141 chr2L 467337 intron CG4297 - chr2L 467408 intron CG4297 - chr2L 467478 intron CG4297 - chr2L_9_465001 chr2L_465001 D9 14 chr2L 510191 510245 chr2L 510303 510355 8 112 2.5 1.5 2.0 2.7 164 chr2L 510191 intron ush + chr2L 510273 intron ush + chr2L 510355 intron ush + chr2L_8_510001 chr2L_510001 D9 15 chr2L 602245 602276 chr2L 602381 602414 11 137 5.5 5.5 5.5 1.7 169 chr2L 602245 intergenic not near genes chr2L 602330 intergenic CG13689 + chr2L 602414 intergenic CG13689 + chr2L_11_600001 chr2L_600001 D9 16 chr2L 630540 630593 chr2L 630665 630728 22 126 3.0 0.0 1.5 8.8 188 chr2L 630540 intergenic not near genes chr2L 630634 intergenic not near genes chr2L 630728 intergenic not near genes chr2L_22_630001 chr2L_630001 D9 17 chr2L 632687 632737 chr2L 632786 632841 27 101 8.0 9.5 8.8 2.8 154 chr2L 632687 intergenic not near genes chr2L 632764 intergenic not near genes chr2L 632841 intergenic not near genes chr2L_27_630001 chr2L_630001 D9 18 chr2L 668410 668462 chr2L 668515 668567 25 105 6.0 3.0 4.5 4.5 157 chr2L 668410 intron ds - chr2L 668488 intron ds - chr2L 668567 intron ds - chr2L_25_665001 chr2L_665001 D9 19 chr2L 686917 686930 chr2L 695982 695993 roo 4 9064 8.0 10.0 9.0 0.4 9076 chr2L 686917 intron ds - chr2L 691455 intron ds - chr2L 695993 intron ds - chr2L_4_690001 chr2L_690001 D9 20 chr2L 736852 736902 chr2L 736982 737028 22 128 4.5 1.5 3.0 5.5 176 chr2L 736852 intergenic Eaat2 - chr2L 736940 intergenic Eaat2 - chr2L 737028 intergenic Eaat2 - chr2L_22_735001 chr2L_735001 D9 21 chr2L 770447 770491 chr2L 772253 772297 Bari1 31 1805 7.5 10.0 8.8 3.2 1850 chr2L 770447 intergenic not near genes chr2L 771372 intergenic not near genes chr2L 772297 intergenic CR44614 + chr2L_31_770001 chr2L_770001 D9 22 chr2L 844916 844969 chr2L 845028 845081 19 111 5.5 7.0 6.2 2.6 165 chr2L 844916 intron drongo - chr2L 844998 intron drongo - chr2L 845081 intron drongo - chr2L_19_840001 chr2L_840001 D9 23 chr2L 849446 849486 chr2L 849562 849602 16 114 4.5 3.5 4.0 3.2 156 chr2L 849446 intron drongo - chr2L 849524 intron drongo - chr2L 849602 intron drongo - chr2L_16_845001 chr2L_845001 D9 24 chr2L 877819 877872 chr2L 877925 877978 25 105 10.5 4.0 7.2 3.0 159 chr2L 877819 3` UTR,exon CG15824 -,ninaA + chr2L 877898 3` UTR,intron CG15824 -,ninaA + chr2L 877978 3` UTR,exon CG15824 -,ninaA + chr2L_25_875001 chr2L_875001 D9 25 chr2L 941850 941855 chr2L 941976 941980 4 126 5.0 13.5 9.2 0.4 130 chr2L 941850 intron CG4341 + chr2L 941915 intron CG4341 + chr2L 941980 intron CG4341 + chr2L_4_940001 chr2L_940001 D9 26 chr2L 958933 958985 chr2L 959085 959125 38 150 9.0 8.5 8.8 3.9 192 chr2L 958933 intergenic not near genes chr2L 959029 intergenic not near genes chr2L 959125 intergenic not near genes chr2L_38_955001 chr2L_955001 D9 27 chr2L 976859 976912 chr2L 984518 984573 roo 13 7661 5.0 4.0 4.5 2.4 7714 chr2L 976859 intergenic not near genes chr2L 980716 intergenic not near genes chr2L 984573 intergenic not near genes chr2L_13_980001 chr2L_980001 D9 28 chr2L 1057475 1057521 chr2L 1057583 1057629 10 108 0.5 10.5 5.5 1.5 154 chr2L 1057475 intron S - chr2L 1057552 intron S - chr2L 1057629 intron S - chr2L_10_1055001 chr2L_1055001 D9 29 chr2L 1066072 1066125 chr2L 1066178 1066231 16 106 4.0 5.5 4.8 2.8 159 chr2L 1066072 intron S - chr2L 1066152 intron S - chr2L 1066231 intron S - chr2L_16_1065001 chr2L_1065001 D9 30 chr2L 1156833 1156892 chr2L 1156963 1157022 15 130 6.0 3.0 4.5 2.7 189 chr2L 1156833 intron capt - chr2L 1156928 intron capt - chr2L 1157022 intron capt - chr2L_15_1155001 chr2L_1155001 D9 31 chr2L 1220106 1220156 chr2L 1227597 1227647 blood 22 7490 8.5 1.0 4.8 3.8 7541 chr2L 1220106 intron CG42329 + chr2L 1223876 intron CG42329 + chr2L 1227647 intron CG42329 + chr2L_22_1220001 chr2L_1220001 D9 32 chr2L 1261230 1261243 chr2L 1261336 1261349 8 106 0.0 4.5 2.2 2.5 119 chr2L 1261230 intron robo3 + chr2L 1261290 intron robo3 + chr2L 1261349 intron robo3 + chr2L_8_1260001 chr2L_1260001 D9 33 chr2L 1301735 1301779 chr2L 1302299 1302343 gypsy 13 564 5.0 3.0 4.0 2.6 608 chr2L 1301735 intergenic not near genes chr2L 1302039 intergenic not near genes chr2L 1302343 intergenic not near genes chr2L_13_1300001 chr2L_1300001 D9 34 chr2L 1321997 1322049 chr2L 1322111 1322163 21 114 4.5 5.0 4.8 3.6 166 chr2L 1321997 intergenic not near genes chr2L 1322080 intergenic not near genes chr2L 1322163 intergenic not near genes chr2L_21_1320001 chr2L_1320001 D9 35 chr2L 1370231 1370277 chr2L 1370421 1370467 15 190 6.5 7.5 7.0 1.9 236 chr2L 1370231 intergenic not near genes chr2L 1370349 intergenic not near genes chr2L 1370467 intergenic not near genes chr2L_15_1370001 chr2L_1370001 D9 36 chr2L 1438798 1438850 chr2L 1438903 1438953 12 105 6.0 2.5 4.2 2.3 155 chr2L 1438798 intergenic not near genes chr2L 1438876 intergenic not near genes chr2L 1438953 intergenic not near genes chr2L_12_1435001 chr2L_1435001 D9 37 chr2L 1443341 1443356 chr2L 1443438 1443461 6 103 0.5 5.0 2.8 1.6 120 chr2L 1443341 3` UTR CG43402 + chr2L 1443401 3` UTR CG43402 + chr2L 1443461 3` UTR CG43402 + chr2L_6_1440001 chr2L_1440001 D9 38 chr2L 1450680 1450728 chr2L 1450790 1450836 14 110 6.0 11.5 8.8 1.4 156 chr2L 1450680 intergenic not near genes chr2L 1450758 intergenic not near genes chr2L 1450836 intergenic not near genes chr2L_14_1450001 chr2L_1450001 D9 39 chr2L 1458222 1458261 chr2L 1458324 1458362 27 101 9.5 10.0 9.8 2.5 140 chr2L 1458222 intergenic not near genes chr2L 1458292 intergenic not near genes chr2L 1458362 intergenic not near genes chr2L_27_1455001 chr2L_1455001 D9 40 chr2L 1529042 1529088 chr2L 1529156 1529204 4 116 6.5 1.0 3.8 0.8 162 chr2L 1529042 intergenic not near genes chr2L 1529123 intergenic not near genes chr2L 1529204 intergenic not near genes chr2L_4_1525001 chr2L_1525001 D9 41 chr2L 1534033 1534086 chr2L 1534388 1534441 25 355 0.5 3.5 2.0 8.3 408 chr2L 1534033 intergenic not near genes chr2L 1534237 intergenic not near genes chr2L 1534441 intergenic not near genes chr2L_25_1530001 chr2L_1530001 D9 42 chr2L 1536468 1536526 chr2L 1536625 1536683 13 157 0.0 4.5 2.2 4.1 215 chr2L 1536468 intergenic not near genes chr2L 1536576 intergenic not near genes chr2L 1536683 intergenic not near genes chr2L_13_1535001 chr2L_1535001 D9 43 chr2L 1570666 1570717 chr2L 1573563 1573614 F-element 20 2897 5.0 3.0 4.0 4.0 2948 chr2L 1570666 intron haf + chr2L 1572140 intron haf + chr2L 1573614 intron haf + chr2L_20_1570001 chr2L_1570001 D9 44 chr2L 1581903 1581941 chr2L 1582033 1582071 8 130 2.5 5.0 3.8 1.7 168 chr2L 1581903 intron haf + chr2L 1581987 intron haf + chr2L 1582071 intron haf + chr2L_8_1580001 chr2L_1580001 D9 45 chr2L 1590929 1590987 chr2L 1591029 1591088 11 100 3.5 4.5 4.0 2.2 159 chr2L 1590929 intron haf + chr2L 1591008 intron haf + chr2L 1591088 intron haf + chr2L_11_1590001 chr2L_1590001 D9 46 chr2L 1628820 1628853 chr2L 1628934 1628967 4 114 3.0 3.5 3.2 1.0 147 chr2L 1628820 intergenic not near genes chr2L 1628894 intergenic not near genes chr2L 1628967 intergenic not near genes chr2L_4_1625001 chr2L_1625001 D9 47 chr2L 1634741 1634764 chr2L 1634851 1634874 8 110 19.0 11.0 15.0 0.5 133 chr2L 1634741 intergenic not near genes chr2L 1634808 intergenic not near genes chr2L 1634874 intergenic not near genes chr2L_8_1630001 chr2L_1630001 D9 48 chr2L 1638137 1638182 chr2L 1638247 1638292 9 110 3.5 4.5 4.0 1.8 155 chr2L 1638137 intergenic not near genes chr2L 1638214 intergenic not near genes chr2L 1638292 intergenic not near genes chr2L_9_1635001 chr2L_1635001 D9 49 chr2L 1644722 1644759 chr2L 1647422 1647459 4 2700 26.0 18.0 22.0 0.2 2737 chr2L 1644722 intergenic not near genes chr2L 1646090 intergenic not near genes chr2L 1647459 intergenic CR45695 - chr2L_4_1645001 chr2L_1645001 D9 50 chr2L 1678934 1679002 chr2L 1686441 1686492 blood 8 7506 0.5 3.5 2.0 2.7 7558 chr2L 1678934 intron chinmo + chr2L 1682713 intron chinmo + chr2L 1686492 intron chinmo + chr2L_8_1680001 chr2L_1680001 D9 51 chr2L 1711336 1711384 chr2L 1711685 1711733 mdg3 24 349 9.5 13.0 11.2 2.0 397 chr2L 1711336 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711534 3` UTR frtz - chr2L 1711733 3` UTR frtz - chr2L_24_1710001 chr2L_1710001 D9 52 chr2L 1721810 1721849 chr2L 1721919 1721951 8 106 0.0 5.0 2.5 2.3 141 chr2L 1721810 intron Rim2 - chr2L 1721880 intron Rim2 - chr2L 1721951 intron Rim2 - chr2L_8_1720001 chr2L_1720001 D9 53 chr2L 1753163 1753219 chr2L 1753274 1753331 16 111 0.0 5.5 2.8 4.2 168 chr2L 1753163 intergenic CG17648 + chr2L 1753247 intergenic CG17648 + chr2L 1753331 intergenic CG17648 + chr2L_16_1750001 chr2L_1750001 D9 54 chr2L 1878217 1878260 chr2L 1878366 1878409 8 149 4.5 2.5 3.5 1.8 192 chr2L 1878217 intron CG31663 - chr2L 1878313 intron CG31663 - chr2L 1878409 intron CG31663 - chr2L_8_1875001 chr2L_1875001 D9 55 chr2L 1883399 1883442 chr2L 1884006 1884046 7 605 0.5 1.5 1.0 3.5 647 chr2L 1883399 intron CG15358 - chr2L 1883722 intron CG15358 - chr2L 1884046 exon CG15358 - chr2L_7_1880001 chr2L_1880001 D9 56 chr2L 1910517 1910568 chr2L 1910631 1910682 7 114 3.5 3.0 3.2 1.7 165 chr2L 1910517 intron CG7337 + chr2L 1910600 intron CG7337 + chr2L 1910682 intron CG7337 + chr2L_7_1910001 chr2L_1910001 D9 57 chr2L 1957926 1957952 chr2L 1958032 1958058 10 106 6.5 7.0 6.8 1.3 132 chr2L 1957926 intron erm - chr2L 1957992 intron erm - chr2L 1958058 intron erm - chr2L_10_1955001 chr2L_1955001 D9 58 chr2L 2004822 2004872 chr2L 2005290 2005340 17 468 4.5 5.0 4.8 2.9 518 chr2L 2004822 intron CG33543 - chr2L 2005081 intron CG33543 - chr2L 2005340 intron CG33543 - chr2L_17_2005001 chr2L_2005001 D9 59 chr2L 2073324 2073356 chr2L 2073432 2073464 8 108 9.0 18.0 13.5 0.6 140 chr2L 2073324 intron dpr3 - chr2L 2073394 intron dpr3 - chr2L 2073464 intron dpr3 - chr2L_8_2070001 chr2L_2070001 D9 60 chr2L 2100375 2100407 chr2L 2109551 2109552 roo 21 9163 8.5 12.5 10.5 1.8 9177 chr2L 2100375 intron dpr3 - chr2L 2104964 intron dpr3 - chr2L 2109552 intron dpr3 - chr2L_21_2100001 chr2L_2100001 D9 61 chr2L 2112087 2112145 chr2L 2119774 2119832 opus 34 7686 6.5 9.5 8.0 3.8 7745 chr2L 2112087 intergenic not near genes chr2L 2115960 intergenic not near genes chr2L 2119832 intergenic not near genes chr2L_34_2115001 chr2L_2115001 D9 62 chr2L 2250397 2250430 chr2L 2251189 2251222 9 792 4.5 0.0 2.2 2.8 825 chr2L 2250397 intergenic Ser12 - chr2L 2250810 exon Ser12 - chr2L 2251222 exon Ser12 - chr2L_9_2250001 chr2L_2250001 D9 63 chr2L 2256448 2256477 chr2L 2256553 2256582 13 105 3.0 7.5 5.2 2.1 134 chr2L 2256448 intergenic not near genes chr2L 2256515 intergenic not near genes chr2L 2256582 intergenic not near genes chr2L_13_2255001 chr2L_2255001 D9 64 chr2L 2260782 2260830 chr2L 2260893 2260941 34 111 9.5 7.0 8.2 3.7 159 chr2L 2260782 intergenic not near genes chr2L 2260862 intergenic not near genes chr2L 2260941 intergenic not near genes chr2L_34_2260001 chr2L_2260001 D9 65 chr2L 2282957 2283013 chr2L 2283142 2283198 25 185 2.5 5.0 3.8 5.2 241 chr2L 2282957 intergenic not near genes chr2L 2283078 intergenic not near genes chr2L 2283198 intergenic not near genes chr2L_25_2280001 chr2L_2280001 D9 66 chr2L 2294015 2294075 chr2L 2299245 2299292 copia 27 5229 5.5 6.5 6.0 3.9 5277 chr2L 2294015 intergenic not near genes chr2L 2296654 intergenic not near genes chr2L 2299292 intergenic not near genes chr2L_27_2295001 chr2L_2295001 D9 67 chr2L 2299307 2299363 chr2L 2299410 2299466 20 103 5.5 5.5 5.5 3.1 159 chr2L 2299307 intergenic not near genes chr2L 2299386 intergenic not near genes chr2L 2299466 intergenic not near genes chr2L_20_2295001 chr2L_2295001 D9 68 chr2L 2392136 2392171 chr2L 2392271 2392306 6 135 4.0 4.5 4.2 1.2 170 chr2L 2392136 intron VGlut + chr2L 2392221 intron VGlut + chr2L 2392306 intron VGlut + chr2L_6_2390001 chr2L_2390001 D9 69 chr2L 2503417 2503454 chr2L 2505040 2505077 11 1623 6.5 0.5 3.5 2.4 1660 chr2L 2503417 intergenic not near genes chr2L 2504247 intergenic not near genes chr2L 2505077 intergenic not near genes chr2L_11_2500001 chr2L_2500001 D9 70 chr2L 2565534 2565560 chr2L 2571630 2571658 297 9 6097 5.0 9.5 7.2 1.1 6124 chr2L 2565534 exon Cyp309a2 - chr2L 2568596 intron Cyp309a2 - chr2L 2571658 exon Cyp309a2 - chr2L_9_2565001 chr2L_2565001 D9 71 chr2L 2587360 2587408 chr2L 2587623 2587671 32 262 5.5 10.0 7.8 3.6 311 chr2L 2587360 intergenic not near genes chr2L 2587516 intergenic not near genes chr2L 2587671 intergenic not near genes chr2L_32_2585001 chr2L_2585001 D9 72 chr2L 2587790 2587843 chr2L 2587894 2587945 33 102 6.0 7.0 6.5 4.4 155 chr2L 2587790 intergenic not near genes chr2L 2587868 intergenic not near genes chr2L 2587945 intergenic not near genes chr2L_33_2585001 chr2L_2585001 D9 73 chr2L 2618014 2618068 chr2L 2618117 2618171 10 104 5.0 5.5 5.2 1.6 157 chr2L 2618014 intergenic not near genes chr2L 2618092 intergenic not near genes chr2L 2618171 intergenic not near genes chr2L_10_2615001 chr2L_2615001 D9 74 chr2L 2618325 2618382 chr2L 2618449 2618506 30 124 5.5 4.5 5.0 5.0 181 chr2L 2618325 intergenic not near genes chr2L 2618416 intergenic not near genes chr2L 2618506 intergenic not near genes chr2L_30_2615001 chr2L_2615001 D9 75 chr2L 2625606 2625622 chr2L 2625707 2625723 8 101 10.0 22.0 16.0 0.5 117 chr2L 2625606 3` UTR CR45705 - chr2L 2625664 3` UTR CR45705 - chr2L 2625723 3` UTR CR45705 - chr2L_8_2625001 chr2L_2625001 D9 76 chr2L 2661180 2661225 chr2L 2663043 2663088 I-element 11 1859 5.5 13.5 9.5 1.0 1908 chr2L 2661180 intergenic not near genes chr2L 2662134 intergenic not near genes chr2L 2663088 intergenic not near genes chr2L_11_2660001 chr2L_2660001 D9 77 chr2L 2661227 2661229 chr2L 2663036 2663051 I-element 11 1832 5.0 12.0 8.5 1.2 1824 chr2L 2661227 intergenic not near genes chr2L 2662139 intergenic not near genes chr2L 2663051 intergenic not near genes chr2L_11_2660001 chr2L_2660001 D9 78 chr2L 2698840 2698891 chr2L 2698952 2698984 20 111 0.0 4.0 2.0 6.7 144 chr2L 2698840 intron CG31690 + chr2L 2698912 intron CG31690 + chr2L 2698984 intron CG31690 + chr2L_20_2695001 chr2L_2695001 D9 79 chr2L 2703421 2703443 chr2L 2703529 2703552 14 108 4.5 15.5 10.0 1.3 131 chr2L 2703421 intron CG31690 + chr2L 2703486 intron CG31690 + chr2L 2703552 intron CG31690 + chr2L_14_2700001 chr2L_2700001 D9 80 chr2L 2772590 2772625 chr2L 2779197 2779232 297 10 6604 6.0 9.5 7.8 1.1 6642 chr2L 2772590 3` UTR Syt1 - chr2L 2775911 intron Syt1 - chr2L 2779232 3` UTR Syt1 - chr2L_10_2775001 chr2L_2775001 D9 81 chr2L 2793919 2793973 chr2L 2794024 2794078 28 105 8.0 7.5 7.8 3.2 159 chr2L 2793919 intron Syt1 - chr2L 2793998 intron Syt1 - chr2L 2794078 intron Syt1 - chr2L_28_2790001 chr2L_2790001 D9 82 chr2L 2826525 2826572 chr2L 2826630 2826682 11 114 0.5 6.0 3.2 2.6 157 chr2L 2826525 intron Duox - chr2L 2826604 intron Duox - chr2L 2826682 intron Duox - chr2L_11_2825001 chr2L_2825001 D9 83 chr2L 3026218 3026265 chr2L 3026860 3026896 23 632 44.5 75.5 60.0 0.4 678 chr2L 3026218 3` UTR CG3542 + chr2L 3026557 3` UTR CG3605 - chr2L 3026896 exon CG3605 - chr2L_23_3025001 chr2L_3025001 D9 84 chr2L 3044878 3044927 chr2L 3045000 3045049 42 121 12.5 6.5 9.5 4.0 171 chr2L 3044878 intron v(2)k05816 + chr2L 3044964 intron v(2)k05816 + chr2L 3045049 intron v(2)k05816 + chr2L_42_3040001 chr2L_3040001 D9 85 chr2L 3073011 3073055 chr2L 3078237 3078282 copia 24 5226 6.5 4.0 5.2 3.9 5271 chr2L 3073011 intron toc - chr2L 3075646 intron toc - chr2L 3078282 intron toc - chr2L_24_3075001 chr2L_3075001 D9 86 chr2L 3078467 3078517 chr2L 3078802 3078852 30 334 0.0 7.5 3.8 6.2 385 chr2L 3078467 intron toc - chr2L 3078660 intron toc - chr2L 3078852 intron toc - chr2L_30_3075001 chr2L_3075001 D9 87 chr2L 3114913 3114932 chr2L 3115011 3115032 7 100 0.5 2.5 1.5 2.8 119 chr2L 3114913 intron toc - chr2L 3114972 intron toc - chr2L 3115032 intron toc - chr2L_7_3110001 chr2L_3110001 D9 88 chr2L 3132744 3132793 chr2L 3133927 3133976 27 1182 3.5 7.0 5.2 4.4 1232 chr2L 3132744 intron toc - chr2L 3133360 intron toc - chr2L 3133976 intron toc - chr2L_27_3130001 chr2L_3130001 D9 89 chr2L 3134931 3134954 chr2L 3135033 3135056 13 102 3.5 4.0 3.8 2.7 125 chr2L 3134931 intron toc - chr2L 3134994 intron toc - chr2L 3135056 intron toc - chr2L_13_3130001 chr2L_3130001 D9 90 chr2L 3185071 3185091 chr2L 3185172 3185192 15 100 8.5 0.0 4.2 2.9 121 chr2L 3185071 exon CG34393 - chr2L 3185132 intron CG34393 - chr2L 3185192 intron CG34393 - chr2L_15_3185001 chr2L_3185001 D9 91 chr2L 3186444 3186498 chr2L 3186555 3186609 11 111 2.0 4.0 3.0 2.8 165 chr2L 3186444 intron CG34393 - chr2L 3186526 intron CG34393 - chr2L 3186609 intron CG34393 - chr2L_11_3185001 chr2L_3185001 D9 92 chr2L 3192187 3192231 chr2L 3192319 3192367 15 135 5.5 7.0 6.2 2.1 180 chr2L 3192187 exon CG34393 - chr2L 3192277 intron CG34393 - chr2L 3192367 intron CG34393 - chr2L_15_3190001 chr2L_3190001 D9 93 chr2L 3202727 3202764 chr2L 3210181 3210218 mdg1 6 7453 6.0 0.0 3.0 1.5 7491 chr2L 3202727 intergenic not near genes chr2L 3206472 intergenic not near genes chr2L 3210218 intergenic CR45336 + chr2L_6_3205001 chr2L_3205001 D9 94 chr2L 3243357 3243369 chr2L 3243461 3243473 5 104 11.0 4.5 7.8 0.6 116 chr2L 3243357 intergenic not near genes chr2L 3243415 intergenic not near genes chr2L 3243473 intergenic not near genes chr2L_5_3240001 chr2L_3240001 D9 95 chr2L 3251473 3251522 chr2L 3259063 3259110 springer 23 7589 4.5 7.0 5.8 3.4 7637 chr2L 3251473 intergenic not near genes chr2L 3255292 intergenic not near genes chr2L 3259110 intergenic not near genes chr2L_23_3255001 chr2L_3255001 D9 96 chr2L 3286127 3286145 chr2L 3286230 3286248 7 103 5.5 7.0 6.2 1.0 121 chr2L 3286127 intergenic not near genes chr2L 3286188 intergenic not near genes chr2L 3286248 intergenic not near genes chr2L_7_3285001 chr2L_3285001 D9 97 chr2L 3508352 3508372 chr2L 3508455 3508475 5 103 0.0 7.5 3.8 1.0 123 chr2L 3508352 intergenic tim -,CR45299 + chr2L 3508414 intergenic CR45299 +,tim - chr2L 3508475 intergenic CR45299 +,tim - chr2L_5_3505001 chr2L_3505001 D9 98 chr2L 3523010 3523017 chr2L 3523147 3523155 6 138 14.0 3.5 8.8 0.6 145 chr2L 3523010 exon Sr-CIV - chr2L 3523082 intron Sr-CIV - chr2L 3523155 exon Sr-CIV - chr2L_6_3520001 chr2L_3520001 D9 99 chr2L 3523018 3523055 chr2L 3523146 3523193 21 137 7.5 3.5 5.5 3.2 175 chr2L 3523018 exon Sr-CIV - chr2L 3523106 intron Sr-CIV - chr2L 3523193 exon Sr-CIV - chr2L_21_3520001 chr2L_3520001 D9 100 chr2L 3601068 3601116 chr2L 3601178 3601221 15 106 1.5 5.5 3.5 3.3 153 chr2L 3601068 intergenic not near genes chr2L 3601144 intergenic not near genes chr2L 3601221 intergenic not near genes chr2L_15_3600001 chr2L_3600001 D9 101 chr2L 3634086 3634134 chr2L 3634193 3634238 16 107 2.5 5.0 3.8 3.3 152 chr2L 3634086 intron for - chr2L 3634162 intron for - chr2L 3634238 exon for - chr2L_16_3630001 chr2L_3630001 D9 102 chr2L 3649770 3649806 chr2L 3654995 3655032 copia 4 5226 0.0 6.5 3.2 1.0 5262 chr2L 3649770 intron for - chr2L 3652401 intron for - chr2L 3655032 intron for - chr2L_4_3650001 chr2L_3650001 D9 103 chr2L 3734632 3734683 chr2L 3734732 3734785 11 102 2.0 4.0 3.0 2.8 153 chr2L 3734632 intron CG10019 + chr2L 3734708 intron CG10019 + chr2L 3734785 intron CG10019 + chr2L_11_3730001 chr2L_3730001 D9 104 chr2L 3819603 3819628 chr2L 3819704 3819729 8 101 0.0 4.5 2.2 2.5 126 chr2L 3819603 intergenic not near genes chr2L 3819666 intergenic not near genes chr2L 3819729 intergenic not near genes chr2L_8_3815001 chr2L_3815001 D9 105 chr2L 3831813 3831858 chr2L 3831919 3831962 9 106 2.5 3.0 2.8 2.4 149 chr2L 3831813 intergenic not near genes chr2L 3831888 intergenic not near genes chr2L 3831962 intergenic not near genes chr2L_9_3830001 chr2L_3830001 D9 106 chr2L 3891882 3891919 chr2L 3891992 3892029 13 110 2.0 4.5 3.2 3.1 147 chr2L 3891882 intron capu - chr2L 3891956 intron capu - chr2L 3892029 intron capu - chr2L_13_3890001 chr2L_3890001 D9 107 chr2L 3936631 3936653 chr2L 3936736 3936758 5 105 0.0 5.0 2.5 1.4 127 chr2L 3936631 intron fred - chr2L 3936694 intron fred - chr2L 3936758 intron fred - chr2L_5_3935001 chr2L_3935001 D9 108 chr2L 3943772 3943818 chr2L 3943888 3943932 12 116 2.5 0.5 1.5 4.8 160 chr2L 3943772 intron fred - chr2L 3943852 intron fred - chr2L 3943932 intron fred - chr2L_12_3940001 chr2L_3940001 D9 109 chr2L 3959157 3959203 chr2L 3959257 3959302 8 101 4.5 3.5 4.0 1.6 145 chr2L 3959157 intron fred - chr2L 3959230 intron fred - chr2L 3959302 intron fred - chr2L_8_3955001 chr2L_3955001 D9 110 chr2L 3997527 3997580 chr2L 3997643 3997693 8 114 0.0 7.0 3.5 1.8 166 chr2L 3997527 intergenic not near genes chr2L 3997610 intergenic not near genes chr2L 3997693 intergenic not near genes chr2L_8_3995001 chr2L_3995001 D9 111 chr2L 4661819 4661854 chr2L 4669424 4669457 opus 17 7605 5.5 13.0 9.2 1.7 7638 chr2L 4661819 intergenic not near genes chr2L 4665638 intergenic not near genes chr2L 4669457 intergenic not near genes chr2L_17_4665001 chr2L_4665001 D9 112 chr2L 4819469 4819519 chr2L 4819617 4819667 11 148 3.5 4.0 3.8 2.3 198 chr2L 4819469 intergenic not near genes chr2L 4819568 intergenic not near genes chr2L 4819667 intergenic not near genes chr2L_11_4815001 chr2L_4815001 D9 113 chr2L 4841045 4841102 chr2L 4841146 4841203 33 101 10.0 7.5 8.8 3.4 158 chr2L 4841045 intron CG12194 + chr2L 4841124 intron CG12194 + chr2L 4841203 3` UTR CG12194 + chr2L_33_4840001 chr2L_4840001 D9 114 chr2L 4862259 4862307 chr2L 4862360 4862408 25 101 10.0 9.5 9.8 2.3 149 chr2L 4862259 intron pog + chr2L 4862334 intron pog + chr2L 4862408 intron pog + chr2L_25_4860001 chr2L_4860001 D9 115 chr2L 4896428 4896470 chr2L 4896544 4896587 8 116 5.0 2.0 3.5 1.8 159 chr2L 4896428 intron CG3036 + chr2L 4896508 intron CG3036 + chr2L 4896587 intron CG3036 + chr2L_8_4895001 chr2L_4895001 D9 116 chr2L 4925653 4925694 chr2L 4925757 4925798 4 104 3.0 5.0 4.0 0.8 145 chr2L 4925653 intron hoe1 - chr2L 4925726 intron hoe1 - chr2L 4925798 intron hoe1 - chr2L_4_4925001 chr2L_4925001 D9 117 chr2L 5027962 5027988 chr2L 5028071 5028097 5 109 1.5 6.5 4.0 1.0 135 chr2L 5027962 intron vkg - chr2L 5028030 intron vkg - chr2L 5028097 intron vkg - chr2L_5_5025001 chr2L_5025001 D9 118 chr2L 5117273 5117325 chr2L 5117380 5117432 15 107 1.5 3.5 2.5 4.3 159 chr2L 5117273 intron Msp300 + chr2L 5117352 intron Msp300 + chr2L 5117432 intron Msp300 + chr2L_15_5115001 chr2L_5115001 D9 119 chr2L 5120961 5121005 chr2L 5121080 5121124 15 118 3.0 1.0 2.0 5.0 163 chr2L 5120961 intron Msp300 + chr2L 5121042 intron Msp300 + chr2L 5121124 intron Msp300 + chr2L_15_5120001 chr2L_5120001 D9 120 chr2L 5207803 5207848 chr2L 5213788 5213833 16 5986 44.5 35.5 40.0 0.4 6030 chr2L 5207803 intron Cyp28d2 + chr2L 5210818 exon Cyp28d1 + chr2L 5213833 intron CG7742 - chr2L_16_5210001 chr2L_5210001 D9 121 chr2L 5262501 5262545 chr2L 5262603 5262645 40 101 16.5 11.0 13.8 2.7 144 chr2L 5262501 intron tkv - chr2L 5262573 intron tkv - chr2L 5262645 intron tkv - chr2L_40_5260001 chr2L_5260001 D9 122 chr2L 5323853 5323890 chr2L 5324117 5324153 4 264 62.0 51.5 56.8 0.1 300 chr2L 5323853 exon Ncoa6 - chr2L 5324003 exon Ncoa6 - chr2L 5324153 exon Ncoa6 - chr2L_4_5320001 chr2L_5320001 D9 123 chr2L 5342761 5342798 chr2L 5345166 5345203 Doc 7 2405 1.0 2.5 1.8 2.5 2442 chr2L 5342761 intergenic not near genes chr2L 5343982 intergenic not near genes chr2L 5345203 intergenic not near genes chr2L_7_5340001 chr2L_5340001 D9 124 chr2L 5378404 5378443 chr2L 5378508 5378545 10 104 4.0 4.0 4.0 2.0 141 chr2L 5378404 intergenic not near genes chr2L 5378474 intergenic not near genes chr2L 5378545 intergenic not near genes chr2L_10_5375001 chr2L_5375001 D9 125 chr2L 5397990 5398040 chr2L 5398095 5398145 25 101 5.0 7.0 6.0 3.6 155 chr2L 5397990 intergenic not near genes chr2L 5398068 intergenic not near genes chr2L 5398145 intergenic not near genes chr2L_25_5395001 chr2L_5395001 D9 126 chr2L 5403116 5403167 chr2L 5403234 5403284 5 117 2.0 0.0 1.0 2.5 168 chr2L 5403116 intergenic not near genes chr2L 5403200 intergenic not near genes chr2L 5403284 intergenic not near genes chr2L_5_5400001 chr2L_5400001 D9 127 chr2L 5487992 5488029 chr2L 5488097 5488134 7 105 5.5 4.5 5.0 1.2 142 chr2L 5487992 intergenic not near genes chr2L 5488063 intergenic not near genes chr2L 5488134 intergenic not near genes chr2L_7_5485001 chr2L_5485001 D9 128 chr2L 5827692 5827739 chr2L 5836723 5836772 roo 14 9033 2.5 3.0 2.8 3.7 9080 chr2L 5827692 intron TrissinR + chr2L 5832232 intron TrissinR + chr2L 5836772 intron TrissinR + chr2L_14_5830001 chr2L_5830001 D9 129 chr2L 5839146 5839181 chr2L 5839260 5839281 8 110 13.0 11.5 12.2 0.6 135 chr2L 5839146 intron TrissinR + chr2L 5839214 intron TrissinR + chr2L 5839281 intron TrissinR + chr2L_8_5835001 chr2L_5835001 D9 130 chr2L 5839182 5839194 chr2L 5839252 5839306 12 96 10.0 10.0 10.0 1.1 124 chr2L 5839182 intron TrissinR + chr2L 5839244 intron TrissinR + chr2L 5839306 intron TrissinR + chr2L_12_5835001 chr2L_5835001 D9 131 chr2L 5864645 5864700 chr2L 5865590 5865645 11 945 4.5 3.0 3.8 2.3 1000 chr2L 5864645 intron rau - chr2L 5865145 intron rau - chr2L 5865645 intron rau - chr2L_11_5865001 chr2L_5865001 D9 132 chr2L 5870450 5870507 chr2L 5870552 5870609 17 101 3.5 6.0 4.8 2.9 159 chr2L 5870450 intron rau - chr2L 5870530 intron rau - chr2L 5870609 intron rau - chr2L_17_5870001 chr2L_5870001 D9 133 chr2L 5887582 5887630 chr2L 5887688 5887735 12 106 2.5 5.0 3.8 2.5 153 chr2L 5887582 3` UTR CR44577 - chr2L 5887658 3` UTR CR44577 - chr2L 5887735 3` UTR CR44577 - chr2L_12_5885001 chr2L_5885001 D9 134 chr2L 5926243 5926449 chr2L 5926346 5926561 6 154 0.0 0.0 0.0 6.0 318 chr2L 5926243 intron dsf + chr2L 5926402 intron dsf + chr2L 5926561 intron dsf + chr2L_6_5925001 chr2L_5925001 D9 135 chr2L 5931292 5931316 chr2L 5931429 5931453 5 136 4.5 3.0 3.8 1.0 161 chr2L 5931292 intron dsf + chr2L 5931372 intron dsf + chr2L 5931453 intron dsf + chr2L_5_5930001 chr2L_5930001 D9 136 chr2L 5944564 5944582 chr2L 5948981 5949007 17 4418 66.5 22.5 44.5 0.4 4443 chr2L 5944564 intron Gpdh + chr2L 5946786 intron Gpdh + chr2L 5949007 intergenic Gpdh +,CG9044 + chr2L_17_5945001 chr2L_5945001 D9 137 chr2L 5989007 5989061 chr2L 5989108 5989162 17 101 1.5 0.5 1.0 8.5 155 chr2L 5989007 intergenic ifc +,lid - chr2L 5989084 intergenic ifc +,lid - chr2L 5989162 intergenic lid -,ifc + chr2L_17_5985001 chr2L_5985001 D9 138 chr2L 6002422 6002467 chr2L 6002533 6002578 5 111 0.0 4.5 2.2 1.6 156 chr2L 6002422 3` UTR Tsp26A + chr2L 6002500 3` UTR Tsp26A + chr2L 6002578 3` UTR Tsp26A + chr2L_5_6000001 chr2L_6000001 D9 139 chr2L 6050415 6050462 chr2L 6050544 6050591 15 129 6.0 1.5 3.8 3.1 176 chr2L 6050415 3` UTR CG12393 + chr2L 6050503 intergenic CG12393 +,CG9135 + chr2L 6050591 intergenic CG12393 +,CG9135 + chr2L_15_6050001 chr2L_6050001 D9 140 chr2L 6079473 6079527 chr2L 6079578 6079634 20 107 7.0 3.5 5.2 3.2 161 chr2L 6079473 5` UTR CR9162 + chr2L 6079554 5` UTR CR9162 + chr2L 6079634 5` UTR CR9162 + chr2L_20_6075001 chr2L_6075001 D9 141 chr2L 6136532 6136579 chr2L 6136654 6136701 9 122 2.0 6.5 4.2 1.7 169 chr2L 6136532 intergenic not near genes chr2L 6136616 intergenic not near genes chr2L 6136701 intergenic not near genes chr2L_9_6135001 chr2L_6135001 D9 142 chr2L 6138714 6138749 chr2L 6138854 6138890 7 141 3.0 0.0 1.5 2.8 176 chr2L 6138714 intergenic CR44824 - chr2L 6138802 intergenic CR44824 - chr2L 6138890 3` UTR CR44824 - chr2L_7_6135001 chr2L_6135001 D9 143 chr2L 6154434 6154490 chr2L 6154535 6154590 23 100 5.0 0.5 2.8 6.1 156 chr2L 6154434 intron CG31639 - chr2L 6154512 intron CG31639 - chr2L 6154590 intron CG31639 - chr2L_23_6150001 chr2L_6150001 D9 144 chr2L 6155347 6155400 chr2L 6155446 6155501 24 100 3.5 3.5 3.5 5.3 154 chr2L 6155347 intergenic CG31639 - chr2L 6155424 intergenic CG31639 - chr2L 6155501 intergenic CG31639 - chr2L_24_6155001 chr2L_6155001 D9 145 chr2L 6185903 6185952 chr2L 6186008 6186057 28 104 3.5 5.5 4.5 5.1 154 chr2L 6185903 intron CG34380 + chr2L 6185980 intron CG34380 + chr2L 6186057 intron CG34380 + chr2L_28_6185001 chr2L_6185001 D9 146 chr2L 6241638 6241687 chr2L 6241741 6241790 16 101 3.5 8.0 5.8 2.4 152 chr2L 6241638 intergenic not near genes chr2L 6241714 intergenic not near genes chr2L 6241790 intergenic not near genes chr2L_16_6240001 chr2L_6240001 D9 147 chr2L 6242955 6242971 chr2L 6243078 6243094 5 123 7.0 2.5 4.8 0.9 139 chr2L 6242955 intergenic not near genes chr2L 6243024 intergenic not near genes chr2L 6243094 intergenic not near genes chr2L_5_6240001 chr2L_6240001 D9 148 chr2L 6261576 6261621 chr2L 6261753 6261798 14 177 1.0 5.5 3.2 3.3 222 chr2L 6261576 intron Ddr + chr2L 6261687 intron Ddr + chr2L 6261798 intron Ddr + chr2L_14_6260001 chr2L_6260001 D9 149 chr2L 6279626 6279654 chr2L 6279727 6279758 INE-1 6 103 3.5 0.5 2.0 2.0 132 chr2L 6279626 intron Ddr + chr2L 6279692 intron Ddr + chr2L 6279758 intron Ddr + chr2L_6_6275001 chr2L_6275001 D9 150 chr2L 6283921 6283943 chr2L 6284057 6284079 5 136 13.5 2.0 7.8 0.6 158 chr2L 6283921 intron Ddr + chr2L 6284000 intron Ddr + chr2L 6284079 intron Ddr + chr2L_5_6280001 chr2L_6280001 D9 151 chr2L 6349054 6349067 chr2L 6349157 6349170 4 103 2.5 2.5 2.5 1.1 116 chr2L 6349054 intergenic CG9498 - chr2L 6349112 intergenic CG9498 - chr2L 6349170 intergenic CG9498 - chr2L_4_6345001 chr2L_6345001 D9 152 chr2L 6363127 6363180 chr2L 6366072 6366131 Burdock 19 2948 6.5 6.5 6.5 2.5 3004 chr2L 6363127 intergenic not near genes chr2L 6364629 intergenic not near genes chr2L 6366131 intergenic not near genes chr2L_19_6360001 chr2L_6360001 D9 153 chr2L 6423863 6423892 chr2L 6423978 6423994 4 106 8.5 1.0 4.8 0.7 131 chr2L 6423863 intergenic Fic + chr2L 6423928 intergenic Fic + chr2L 6423994 intergenic Fic + chr2L_4_6420001 chr2L_6420001 D9 154 chr2L 6426828 6426887 chr2L 6445113 6445172 roo 28 18285 6.0 10.0 8.0 3.1 18344 chr2L 6426828 3` UTR CG9527 - chr2L 6436000 intron CG9527 - chr2L 6445172 exon CG9527 - chr2L_28_6435001 chr2L_6435001 D9 155 chr2L 6463534 6463584 chr2L 6463651 6463701 13 116 48.0 46.0 47.0 0.3 167 chr2L 6463534 exon CG16947 - chr2L 6463618 exon CG16947 - chr2L 6463701 exon CG16947 - chr2L_13_6460001 chr2L_6460001 D9 156 chr2L 6516024 6516072 chr2L 6516131 6516178 13 107 8.5 9.5 9.0 1.3 154 chr2L 6516024 intron CG31637 + chr2L 6516101 intron CG31637 + chr2L 6516178 intron CG31637 + chr2L_13_6515001 chr2L_6515001 D9 157 chr2L 6526953 6526989 chr2L 6527064 6527100 4 111 5.0 5.0 5.0 0.7 147 chr2L 6526953 3` UTR CG31637 + chr2L 6527026 intergenic CG31637 +,eya - chr2L 6527100 intergenic CG31637 +,eya - chr2L_4_6525001 chr2L_6525001 D9 158 chr2L 6544365 6544395 chr2L 6544482 6544512 8 117 1.0 6.0 3.5 1.8 147 chr2L 6544365 intron eya - chr2L 6544438 intron eya - chr2L 6544512 intron eya - chr2L_8_6540001 chr2L_6540001 D9 159 chr2L 6590075 6590124 chr2L 6590176 6590227 19 102 4.5 2.5 3.5 4.2 152 chr2L 6590075 intron CG11319 - chr2L 6590151 intron CG11319 - chr2L 6590227 intron CG11319 - chr2L_19_6590001 chr2L_6590001 D9 160 chr2L 6600032 6600083 chr2L 6600179 6600231 9 148 20.5 19.5 20.0 0.4 199 chr2L 6600032 intron CG11319 - chr2L 6600132 intron CG11319 - chr2L 6600231 intron CG11319 - chr2L_9_6600001 chr2L_6600001 D9 161 chr2L 6626864 6626913 chr2L 6626973 6627023 22 109 16.5 18.5 17.5 1.2 159 chr2L 6626864 intron Oatp26F - chr2L 6626944 intron Oatp26F - chr2L 6627023 intron Oatp26F - chr2L_22_6625001 chr2L_6625001 D9 162 chr2L 6557690 6557734 chr2L 6637250 6637294 7 79560 25.0 32.5 28.8 0.2 79604 chr2L 6557690 intergenic CoVb +,Osm6 - chr2L 6597492 intron CG11319 - chr2L 6637294 intron CG31635 - chr2L_7_6595001 chr2L_6595001 D9 163 chr2L 6724508 6724553 chr2L 6724616 6724661 5 107 10.0 9.0 9.5 0.5 153 chr2L 6724508 intron Liprin-alpha + chr2L 6724584 intron Liprin-alpha + chr2L 6724661 intron Liprin-alpha + chr2L_5_6720001 chr2L_6720001 D9 164 chr2L 6744539 6744595 chr2L 6744650 6744705 8 111 8.5 14.5 11.5 0.6 166 chr2L 6744539 intron CG11221 + chr2L 6744622 intron CG11221 + chr2L 6744705 intron,exon CG11221 +,CG31910 - chr2L_8_6740001 chr2L_6740001 D9 165 chr2L 6771970 6772021 chr2L 6772077 6772128 24 109 14.5 16.0 15.2 1.5 158 chr2L 6771970 intron CG11321 - chr2L 6772049 intron CG11321 - chr2L 6772128 intron CG11321 - chr2L_24_6770001 chr2L_6770001 D9 166 chr2L 6787888 6787942 chr2L 6789814 6789868 9 1926 36.5 16.5 26.5 0.3 1980 chr2L 6787888 intergenic not near genes chr2L 6788878 intergenic not near genes chr2L 6789868 3` UTR nrv2 - chr2L_9_6785001 chr2L_6785001 D9 167 chr2L 6799511 6799563 chr2L 6799624 6799676 8 112 6.0 3.5 4.8 1.4 165 chr2L 6799511 5` UTR CR43610 + chr2L 6799594 5` UTR CR43610 + chr2L 6799676 intergenic CR43610 +,CG17376 - chr2L_8_6795001 chr2L_6795001 D9 168 chr2L 6823152 6823196 chr2L 6823262 6823306 8 110 10.0 7.0 8.5 0.8 154 chr2L 6823152 intron sens-2 + chr2L 6823229 intron sens-2 + chr2L 6823306 intron sens-2 + chr2L_8_6820001 chr2L_6820001 D9 169 chr2L 6833360 6833418 chr2L 6833472 6833530 20 111 9.5 9.0 9.2 2.0 170 chr2L 6833360 intron sens-2 + chr2L 6833445 intron sens-2 + chr2L 6833530 intron sens-2 + chr2L_20_6830001 chr2L_6830001 D9 170 chr2L 6876770 6876800 chr2L 6882985 6883005 diver 5 6213 5.5 9.0 7.2 0.6 6235 chr2L 6876770 intron Nlg2 + chr2L 6879888 intron Nlg2 + chr2L 6883005 intron Nlg2 + chr2L_5_6875001 chr2L_6875001 D9 171 chr2L 6887472 6887524 chr2L 6887647 6887701 7 176 3.5 0.0 1.8 2.5 229 chr2L 6887472 intron Nlg2 + chr2L 6887586 intron Nlg2 + chr2L 6887701 intron Nlg2 + chr2L_7_6885001 chr2L_6885001 D9 172 chr2L 6891419 6891461 chr2L 6891542 6891584 8 123 1.5 2.0 1.8 2.9 165 chr2L 6891419 intron Nlg2 + chr2L 6891502 intron Nlg2 + chr2L 6891584 intron Nlg2 + chr2L_8_6890001 chr2L_6890001 D9 173 chr2L 6969251 6969306 chr2L 6969356 6969411 18 105 4.0 6.5 5.2 2.9 160 chr2L 6969251 3` UTR snRNP-U1-70K - chr2L 6969331 3` UTR snRNP-U1-70K - chr2L 6969411 3` UTR snRNP-U1-70K - chr2L_18_6965001 chr2L_6965001 D9 174 chr2L 6991390 6991433 chr2L 6998549 6998581 HMS-Beagle 6 7150 0.0 9.0 4.5 1.1 7191 chr2L 6991390 intron uif - chr2L 6994986 intron uif - chr2L 6998581 intron uif - chr2L_6_6990001 chr2L_6990001 D9 175 chr2L 7005205 7005254 chr2L 7005326 7005375 12 121 2.5 3.0 2.8 3.2 170 chr2L 7005205 intron uif - chr2L 7005290 intron uif - chr2L 7005375 intron uif - chr2L_12_7005001 chr2L_7005001 D9 176 chr2L 7043509 7043529 chr2L 7043668 7043688 8 158 0.0 2.5 1.2 3.6 179 chr2L 7043509 intron milt + chr2L 7043598 intron milt + chr2L 7043688 intron milt + chr2L_8_7040001 chr2L_7040001 D9 177 chr2L 7100956 7101016 chr2L 7101207 7101267 21 251 5.0 6.0 5.5 3.2 311 chr2L 7100956 intron Pvf3 - chr2L 7101112 intron Pvf3 - chr2L 7101267 intron Pvf3 - chr2L_21_7100001 chr2L_7100001 D9 178 chr2L 7111731 7111750 chr2L 7111840 7111859 10 110 5.0 3.0 4.0 2.0 128 chr2L 7111731 intron Pvf3 - chr2L 7111795 intron Pvf3 - chr2L 7111859 intron Pvf3 - chr2L_10_7110001 chr2L_7110001 D9 179 chr2L 7162732 7162784 chr2L 7162847 7162899 11 115 2.0 3.0 2.5 3.1 167 chr2L 7162732 intergenic not near genes chr2L 7162816 intergenic not near genes chr2L 7162899 intergenic not near genes chr2L_11_7160001 chr2L_7160001 D9 180 chr2L 7218375 7218430 chr2L 7218478 7218530 8 102 2.5 2.5 2.5 2.3 155 chr2L 7218375 intron CG13784 - chr2L 7218452 intron CG13784 - chr2L 7218530 intron CG13784 - chr2L_8_7215001 chr2L_7215001 D9 181 chr2L 7246531 7246557 chr2L 7247415 7247440 7 884 1.0 2.0 1.5 2.8 909 chr2L 7246531 intron Ndae1 - chr2L 7246986 intron Ndae1 - chr2L 7247440 intron Ndae1 - chr2L_7_7245001 chr2L_7245001 D9 182 chr2L 7325890 7325945 chr2L 7326000 7326055 28 109 9.5 7.5 8.5 2.9 165 chr2L 7325890 intergenic not near genes chr2L 7325972 intergenic not near genes chr2L 7326055 intergenic not near genes chr2L_28_7325001 chr2L_7325001 D9 183 chr2L 7326466 7326502 chr2L 7326609 7326645 6 143 5.0 6.5 5.8 0.9 179 chr2L 7326466 intergenic not near genes chr2L 7326556 intergenic not near genes chr2L 7326645 intergenic not near genes chr2L_6_7325001 chr2L_7325001 D9 184 chr2L 7331651 7331706 chr2L 7331772 7331828 13 121 4.0 6.0 5.0 2.2 177 chr2L 7331651 intergenic not near genes chr2L 7331740 intergenic not near genes chr2L 7331828 intergenic not near genes chr2L_13_7330001 chr2L_7330001 D9 185 chr2L 7343302 7343355 chr2L 7350443 7350496 roo 24 7140 8.0 8.0 8.0 2.7 7194 chr2L 7343302 intron Wnt6 + chr2L 7346899 intron Wnt6 + chr2L 7350496 intron Wnt6 + chr2L_24_7345001 chr2L_7345001 D9 186 chr2L 7358276 7358316 chr2L 7358380 7358420 16 104 5.0 0.0 2.5 4.6 144 chr2L 7358276 intergenic not near genes chr2L 7358348 intergenic not near genes chr2L 7358420 intergenic not near genes chr2L_16_7355001 chr2L_7355001 D9 187 chr2L 7410601 7410650 chr2L 7410862 7410911 13 261 2.5 5.5 4.0 2.6 310 chr2L 7410601 intergenic CG15818 + chr2L 7410756 intergenic CG15818 + chr2L 7410911 5` UTR CG15818 + chr2L_13_7410001 chr2L_7410001 D9 188 chr2L 7473163 7473201 chr2L 7560545 7560583 7 87379 12.5 16.0 14.2 0.5 87420 chr2L 7473163 exon Ziz - chr2L 7516873 intron RapGAP1 - chr2L 7560583 intron RapGAP1 - chr2L_7_7515001 chr2L_7515001 D9 189 chr2L 7502711 7502762 chr2L 7502812 7502863 15 101 3.0 3.5 3.2 3.6 152 chr2L 7502711 intron RapGAP1 - chr2L 7502787 intron RapGAP1 - chr2L 7502863 intron RapGAP1 - chr2L_15_7500001 chr2L_7500001 D9 190 chr2L 7572449 7572483 chr2L 7572624 7572656 9 175 5.0 1.0 3.0 2.2 207 chr2L 7572449 intron RapGAP1 - chr2L 7572552 intron RapGAP1 - chr2L 7572656 intron RapGAP1 - chr2L_9_7570001 chr2L_7570001 D9 191 chr2L 7609507 7609745 chr2L 7609627 7609847 17 107 3.0 2.0 2.5 4.9 340 chr2L 7609507 intron CG6739 + chr2L 7609677 intron CG6739 + chr2L 7609847 intron CG6739 + chr2L_17_7605001 chr2L_7605001 D9 192 chr2L 7775610 7775653 chr2L 7775727 7775770 7 117 7.5 3.5 5.5 1.1 160 chr2L 7775610 intergenic CG7179 - chr2L 7775690 intergenic CG7179 - chr2L 7775770 intergenic CG7179 - chr2L_7_7775001 chr2L_7775001 D9 193 chr2L 7867564 7867598 chr2L 7867683 7867717 6 118 4.0 2.5 3.2 1.4 153 chr2L 7867564 intron Proc - chr2L 7867640 intron Proc - chr2L 7867717 intron Proc - chr2L_6_7865001 chr2L_7865001 D9 194 chr2L 7941174 7941196 chr2L 7941278 7941300 10 103 13.5 7.5 10.5 0.9 126 chr2L 7941174 intron Snoo - chr2L 7941237 intron Snoo - chr2L 7941300 intron Snoo - chr2L_10_7940001 chr2L_7940001 D9 195 chr2L 7959016 7959070 chr2L 7960452 7960508 pogo 8 1436 4.0 0.5 2.2 2.5 1492 chr2L 7959016 intron Snoo - chr2L 7959762 intron Snoo - chr2L 7960508 intron Snoo - chr2L_8_7955001 chr2L_7955001 D9 196 chr2L 7973908 7973929 chr2L 7974036 7974057 7 128 1.5 8.5 5.0 1.2 149 chr2L 7973908 intron Snoo - chr2L 7973982 intron Snoo - chr2L 7974057 intron Snoo - chr2L_7_7970001 chr2L_7970001 D9 197 chr2L 7977063 7977105 chr2L 7984063 7984105 297 20 7000 9.5 13.0 11.2 1.6 7042 chr2L 7977063 intron Snoo - chr2L 7980584 intron Snoo - chr2L 7984105 intron,5` UTR Snoo -,CG7231 + chr2L_20_7980001 chr2L_7980001 D9 198 chr2L 8018818 8018822 chr2L 8023626 8023631 Doc 4 4809 0.0 5.0 2.5 1.1 4813 chr2L 8018818 intron Tg + chr2L 8021224 intron Tg + chr2L 8023631 intron Tg + chr2L_4_8020001 chr2L_8020001 D9 199 chr2L 8044070 8044128 chr2L 8044174 8044232 17 104 6.5 2.0 4.2 3.3 162 chr2L 8044070 exon CG7466 + chr2L 8044151 intron CG7466 + chr2L 8044232 intron CG7466 + chr2L_17_8040001 chr2L_8040001 D9 200 chr2L 8167123 8167176 chr2L 8167239 8167290 23 115 2.5 6.5 4.5 4.2 167 chr2L 8167123 intron Piezo + chr2L 8167206 intron Piezo + chr2L 8167290 intron Piezo + chr2L_23_8165001 chr2L_8165001 D9 201 chr2L 8244707 8244748 chr2L 8244854 8244895 16 147 3.0 6.5 4.8 2.8 188 chr2L 8244707 intron CG8086 - chr2L 8244801 intron CG8086 - chr2L 8244895 intron CG8086 - chr2L_16_8240001 chr2L_8240001 D9 202 chr2L 8323670 8323730 chr2L 8323796 8323855 22 124 5.5 5.0 5.2 3.5 185 chr2L 8323670 intron CG7781 - chr2L 8323762 intron CG7781 - chr2L 8323855 intron CG7781 - chr2L_22_8320001 chr2L_8320001 D9 203 chr2L 8336928 8336967 chr2L 8337032 8337068 5 103 0.5 5.5 3.0 1.2 140 chr2L 8336928 intergenic not near genes chr2L 8336998 intergenic not near genes chr2L 8337068 intergenic not near genes chr2L_5_8335001 chr2L_8335001 D9 204 chr2L 8452405 8452445 chr2L 8461601 8461639 roo 19 9195 6.0 6.0 6.0 2.7 9234 chr2L 8452405 intron fu12 - chr2L 8457022 intron fu12 - chr2L 8461639 intron fu12 - chr2L_19_8455001 chr2L_8455001 D9 205 chr2L 8484391 8484439 chr2L 8484675 8484703 14 275 8.5 9.0 8.8 1.4 312 chr2L 8484391 intron d + chr2L 8484547 intron d + chr2L 8484703 intron d + chr2L_14_8480001 chr2L_8480001 D9 206 chr2L 8498187 8498230 chr2L 8498293 8498336 8 106 4.5 4.5 4.5 1.5 149 chr2L 8498187 intron Dh31 - chr2L 8498262 intron Dh31 - chr2L 8498336 intron Dh31 - chr2L_8_8495001 chr2L_8495001 D9 207 chr2L 8553446 8553492 chr2L 8553618 8553664 27 172 4.0 8.0 6.0 3.9 218 chr2L 8553446 intron Sema-1a + chr2L 8553555 intron Sema-1a + chr2L 8553664 intron Sema-1a + chr2L_27_8550001 chr2L_8550001 D9 208 chr2L 8594442 8594494 chr2L 8601521 8601571 297 19 7079 1.5 5.0 3.2 4.5 7129 chr2L 8594442 intron,3` UTR Sema-1a +,CR43855 - chr2L 8598006 intron Sema-1a + chr2L 8601571 intron Sema-1a + chr2L_19_8595001 chr2L_8595001 D9 209 chr2L 8629255 8629289 chr2L 8629358 8629392 9 103 5.0 3.0 4.0 1.8 137 chr2L 8629255 intron Sema-1a + chr2L 8629324 intron Sema-1a + chr2L 8629392 intron Sema-1a + chr2L_9_8625001 chr2L_8625001 D9 210 chr2L 8723091 8723145 chr2L 8731493 8731547 Tirant 20 8402 1.5 6.0 3.8 4.2 8456 chr2L 8723091 intron raw - chr2L 8727319 intron raw - chr2L 8731547 intron raw - chr2L_20_8725001 chr2L_8725001 D9 211 chr2L 8759963 8759976 chr2L 8760129 8760142 9 166 7.5 0.0 3.8 1.9 179 chr2L 8759963 intergenic not near genes chr2L 8760052 intergenic not near genes chr2L 8760142 intergenic not near genes chr2L_9_8760001 chr2L_8760001 D9 212 chr2L 8784680 8784715 chr2L 8784816 8784851 14 136 6.5 3.0 4.8 2.4 171 chr2L 8784680 intergenic not near genes chr2L 8784766 intergenic not near genes chr2L 8784851 intergenic not near genes chr2L_14_8780001 chr2L_8780001 D9 213 chr2L 8786531 8786575 chr2L 8786643 8786687 12 112 0.5 7.0 3.8 2.5 156 chr2L 8786531 intergenic not near genes chr2L 8786609 intergenic not near genes chr2L 8786687 intergenic not near genes chr2L_12_8785001 chr2L_8785001 D9 214 chr2L 8788729 8788788 chr2L 8788845 8788904 16 116 4.0 4.0 4.0 3.2 175 chr2L 8788729 intergenic not near genes chr2L 8788816 intergenic not near genes chr2L 8788904 intergenic not near genes chr2L_16_8785001 chr2L_8785001 D9 215 chr2L 8799779 8799832 chr2L 8799920 8799972 12 139 1.5 4.0 2.8 3.2 193 chr2L 8799779 intergenic not near genes chr2L 8799876 intergenic not near genes chr2L 8799972 intergenic not near genes chr2L_12_8795001 chr2L_8795001 D9 216 chr2L 8902435 8902477 chr2L 8902607 8902649 12 171 3.5 6.0 4.8 2.1 214 chr2L 8902435 intron CG34398 + chr2L 8902542 intron CG34398 + chr2L 8902649 intron CG34398 + chr2L_12_8900001 chr2L_8900001 D9 217 chr2L 8910701 8910748 chr2L 8910813 8910864 12 115 3.5 1.5 2.5 3.4 163 chr2L 8910701 intron CG34398 + chr2L 8910782 intron CG34398 + chr2L 8910864 intron CG34398 + chr2L_12_8910001 chr2L_8910001 D9 218 chr2L 8946678 8946734 chr2L 8946812 8946867 13 134 4.5 4.0 4.2 2.5 189 chr2L 8946678 intron C1GalTA - chr2L 8946772 intron C1GalTA - chr2L 8946867 intron C1GalTA - chr2L_13_8945001 chr2L_8945001 D9 219 chr2L 8956212 8956232 chr2L 8956314 8956334 4 102 2.5 0.0 1.2 1.8 122 chr2L 8956212 intron CG31886 - chr2L 8956273 intron CG31886 - chr2L 8956334 intron CG31886 - chr2L_4_8955001 chr2L_8955001 D9 220 chr2L 8976200 8976240 chr2L 8976317 8976357 6 117 0.0 1.5 0.8 3.3 157 chr2L 8976200 intergenic not near genes chr2L 8976278 intergenic not near genes chr2L 8976357 intergenic not near genes chr2L_6_8975001 chr2L_8975001 D9 221 chr2L 9000259 9000305 chr2L 9007794 9007840 roo 16 7535 9.0 0.0 4.5 2.9 7581 chr2L 9000259 intergenic Try29F + chr2L 9004050 intergenic not near genes chr2L 9007840 intergenic not near genes chr2L_16_9000001 chr2L_9000001 D9 222 chr2L 9025797 9025854 chr2L 9025904 9025963 39 108 5.0 9.5 7.2 4.8 166 chr2L 9025797 intron,3` UTR CG9582 -,CR44352 - chr2L 9025880 intron,3` UTR CG9582 -,CR44352 - chr2L 9025963 intron,3` UTR CG9582 -,CR44352 - chr2L_39_9025001 chr2L_9025001 D9 223 chr2L 9042540 9042588 chr2L 9042672 9042707 6 123 0.0 2.5 1.2 2.7 167 chr2L 9042540 intergenic not near genes chr2L 9042624 intergenic not near genes chr2L 9042707 intergenic not near genes chr2L_6_9040001 chr2L_9040001 D9 224 chr2L 9053385 9053429 chr2L 9053645 9053689 11 260 2.5 0.0 1.2 5.0 304 chr2L 9053385 exon CG31708 - chr2L 9053537 intron CG31708 - chr2L 9053689 intron CG31708 - chr2L_11_9050001 chr2L_9050001 D9 225 chr2L 9084336 9084340 chr2L 16217660 16217660 50 7133322 30.5 24.0 27.2 1.8 7133324 chr2L 9084336 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_50_12650001 chr2L_12650001 D9 226 chr2L 9113775 9113809 chr2L 9113910 9113944 7 135 4.5 0.5 2.5 2.0 169 chr2L 9113775 intergenic Or30a + chr2L 9113860 intergenic not near genes chr2L 9113944 intergenic not near genes chr2L_7_9110001 chr2L_9110001 D9 227 chr2L 9217949 9217994 chr2L 9222761 9222806 Doc 23 4812 6.5 6.0 6.2 3.2 4857 chr2L 9217949 intron tai + chr2L 9220378 intron tai + chr2L 9222806 intron tai + chr2L_23_9220001 chr2L_9220001 D9 228 chr2L 9225393 9225424 chr2L 9225493 9225528 7 103 7.0 4.5 5.8 1.0 135 chr2L 9225393 intron tai + chr2L 9225460 intron tai + chr2L 9225528 intron tai + chr2L_7_9225001 chr2L_9225001 D9 229 chr2L 9227204 9227227 chr2L 9227312 9227335 6 108 8.0 2.0 5.0 1.0 131 chr2L 9227204 intron tai + chr2L 9227270 intron tai + chr2L 9227335 intron tai + chr2L_6_9225001 chr2L_9225001 D9 230 chr2L 9251120 9251175 chr2L 9251242 9251297 16 122 3.5 5.5 4.5 2.9 177 chr2L 9251120 intergenic aust -,borr - chr2L 9251208 intergenic aust -,borr - chr2L 9251297 intergenic borr -,aust - chr2L_16_9250001 chr2L_9250001 D9 231 chr2L 9262085 9262143 chr2L 9262215 9262273 25 129 10.0 3.0 6.5 3.3 188 chr2L 9262085 intron,3` UTR Ggamma30A +,CR45262 - chr2L 9262179 intron,3` UTR Ggamma30A +,CR45262 - chr2L 9262273 intron,intron Ggamma30A +,CR45262 - chr2L_25_9260001 chr2L_9260001 D9 232 chr2L 9297355 9297405 chr2L 9297457 9297507 9 102 3.0 7.5 5.2 1.5 152 chr2L 9297355 3` UTR Ggamma30A + chr2L 9297431 3` UTR Ggamma30A + chr2L 9297507 3` UTR Ggamma30A + chr2L_9_9295001 chr2L_9295001 D9 233 chr2L 9367576 9367586 chr2L 9367677 9367687 6 101 3.0 9.0 6.0 0.9 111 chr2L 9367576 intergenic CG34181 + chr2L 9367632 intergenic CG34181 + chr2L 9367687 5` UTR CG34181 + chr2L_6_9365001 chr2L_9365001 D9 234 chr2L 9380220 9380249 chr2L 9380340 9380369 15 120 13.0 7.5 10.2 1.3 149 chr2L 9380220 exon Shawl - chr2L 9380294 intron Shawl - chr2L 9380369 intron Shawl - chr2L_15_9380001 chr2L_9380001 D9 235 chr2L 9383569 9383590 chr2L 9383672 9383692 5 103 0.0 0.0 0.0 5.0 123 chr2L 9383569 intron Shawl - chr2L 9383630 intron Shawl - chr2L 9383692 intron Shawl - chr2L_5_9380001 chr2L_9380001 D9 236 chr2L 9387237 9387276 chr2L 9387360 9387399 11 123 1.5 2.5 2.0 3.7 162 chr2L 9387237 intron Shawl - chr2L 9387318 intron Shawl - chr2L 9387399 intron,5` UTR Shawl -,Aldh + chr2L_11_9385001 chr2L_9385001 D9 237 chr2L 9393488 9393516 chr2L 9396479 9396507 jockey 4 2991 1.0 4.5 2.8 1.1 3019 chr2L 9393488 intron Shawl - chr2L 9394998 intron Shawl - chr2L 9396507 intron Shawl - chr2L_4_9390001 chr2L_9390001 D9 238 chr2L 9396726 9396771 chr2L 9401147 9401176 9 4407 45.5 7.5 26.5 0.3 4450 chr2L 9396726 intron Shawl - chr2L 9398951 intron Shawl - chr2L 9401176 intron Shawl - chr2L_9_9395001 chr2L_9395001 D9 239 chr2L 9448894 9448917 chr2L 9449006 9449029 4 112 0.0 5.5 2.8 1.1 135 chr2L 9448894 intron numb + chr2L 9448962 intron numb + chr2L 9449029 intron numb + chr2L_4_9445001 chr2L_9445001 D9 240 chr2L 9454953 9455004 chr2L 9455080 9455131 20 127 3.5 6.5 5.0 3.3 178 chr2L 9454953 intron numb + chr2L 9455042 intron numb + chr2L 9455131 intron numb + chr2L_20_9455001 chr2L_9455001 D9 241 chr2L 9456912 9456960 chr2L 9457017 9457066 13 106 1.0 2.5 1.8 4.6 154 chr2L 9456912 intron numb + chr2L 9456989 intron numb + chr2L 9457066 intron numb + chr2L_13_9455001 chr2L_9455001 D9 242 chr2L 9474763 9474809 chr2L 9474880 9474928 5 118 1.5 1.5 1.5 2.0 165 chr2L 9474763 intergenic not near genes chr2L 9474846 intergenic not near genes chr2L 9474928 intergenic not near genes chr2L_5_9470001 chr2L_9470001 D9 243 chr2L 9493229 9493276 chr2L 9493337 9493385 26 108 5.0 6.5 5.8 3.8 156 chr2L 9493229 intron Gdi - chr2L 9493307 intron Gdi - chr2L 9493385 intron Gdi - chr2L_26_9490001 chr2L_9490001 D9 244 chr2L 9527299 9527311 chr2L 9527406 9527418 8 107 2.0 6.0 4.0 1.6 119 chr2L 9527299 intron Oatp30B + chr2L 9527358 intron Oatp30B + chr2L 9527418 intron Oatp30B + chr2L_8_9525001 chr2L_9525001 D9 245 chr2L 9619477 9619507 chr2L 9619839 9619869 7 361 2.0 5.0 3.5 1.6 392 chr2L 9619477 intron GlcAT-S + chr2L 9619673 intron GlcAT-S + chr2L 9619869 intron GlcAT-S + chr2L_7_9615001 chr2L_9615001 D9 246 chr2L 9664889 9664940 chr2L 9665009 9665060 22 120 10.0 4.5 7.2 2.7 171 chr2L 9664889 intergenic not near genes chr2L 9664974 intergenic not near genes chr2L 9665060 intergenic not near genes chr2L_22_9660001 chr2L_9660001 D9 247 chr2L 9730952 9731001 chr2L 9731060 9731106 15 108 2.0 2.0 2.0 5.0 154 chr2L 9730952 intron Nckx30C - chr2L 9731029 intron Nckx30C - chr2L 9731106 intron Nckx30C - chr2L_15_9730001 chr2L_9730001 D9 248 chr2L 9767875 9767937 chr2L 9767978 9768041 27 103 6.5 7.0 6.8 3.5 166 chr2L 9767875 intron,exon ppk18 -,CG4017 + chr2L 9767958 intron,exon ppk18 -,CG4017 + chr2L 9768041 intron,exon ppk18 -,CG4017 + chr2L_27_9765001 chr2L_9765001 D9 249 chr2L 9775955 9776003 chr2L 9776062 9776110 9 107 0.0 2.0 1.0 4.5 155 chr2L 9775955 intergenic not near genes chr2L 9776032 intergenic not near genes chr2L 9776110 intergenic not near genes chr2L_9_9775001 chr2L_9775001 D9 250 chr2L 9873738 9873775 chr2L 9873859 9873890 12 120 4.5 5.0 4.8 2.1 152 chr2L 9873738 intron nAChRalpha6 - chr2L 9873814 intron nAChRalpha6 - chr2L 9873890 intron nAChRalpha6 - chr2L_12_9870001 chr2L_9870001 D9 251 chr2L 9973703 9973757 chr2L 9980847 9980901 HMS-Beagle 36 7144 13.5 11.5 12.5 2.7 7198 chr2L 9973703 intergenic not near genes chr2L 9977302 intergenic not near genes chr2L 9980901 intergenic not near genes chr2L_36_9975001 chr2L_9975001 D9 252 chr2L 9986332 9986380 chr2L 9986452 9986500 16 118 2.0 11.0 6.5 2.1 168 chr2L 9986332 intron bib + chr2L 9986416 intron bib + chr2L 9986500 intron bib + chr2L_16_9985001 chr2L_9985001 D9 253 chr2L 10050360 10050413 chr2L 10050469 10050510 19 108 6.0 6.0 6.0 2.7 150 chr2L 10050360 exon CG33301 + chr2L 10050435 exon CG33301 + chr2L 10050510 exon CG33301 + chr2L_19_10050001 chr2L_10050001 D9 254 chr2L 10051700 10051752 chr2L 10051809 10051862 32 108 7.5 5.0 6.2 4.4 162 chr2L 10051700 5` UTR CR44874 + chr2L 10051781 5` UTR CR44874 + chr2L 10051862 5` UTR CR44874 + chr2L_32_10050001 chr2L_10050001 D9 255 chr2L 10138171 10138193 chr2L 10143438 10143458 Rt1c 12 5265 6.5 20.5 13.5 0.8 5287 chr2L 10138171 intron CG44153 - chr2L 10140814 intron CG44153 - chr2L 10143458 intron CG44153 - chr2L_12_10140001 chr2L_10140001 D9 256 chr2L 10153181 10153235 chr2L 10153284 10153339 28 103 12.0 4.5 8.2 3.0 158 chr2L 10153181 intron,exon CG44153 -,CG4839 + chr2L 10153260 intron,intron CG44153 -,CG4839 + chr2L 10153339 intron,exon CG44153 -,CG4839 + chr2L_28_10150001 chr2L_10150001 D9 257 chr2L 10156296 10156353 chr2L 10163791 10163848 blood 11 7495 4.0 3.5 3.8 2.3 7552 chr2L 10156296 intron,3` UTR CG44153 -,CG4839 + chr2L 10160072 intron CG44153 - chr2L 10163848 intron CG44153 - chr2L_11_10160001 chr2L_10160001 D9 258 chr2L 10180561 10180603 chr2L 10180673 10180703 12 109 6.5 0.0 3.2 2.9 142 chr2L 10180561 intergenic CG44153 - chr2L 10180632 intergenic CG44153 - chr2L 10180703 intergenic CG44153 - chr2L_12_10180001 chr2L_10180001 D9 259 chr2L 10209826 10209846 chr2L 10209928 10209944 4 101 6.0 0.0 3.0 1.0 118 chr2L 10209826 intergenic CG5727 -,CR44845 +,CG5731 - chr2L 10209885 3` UTR CG5727 - chr2L 10209944 3` UTR CG5727 - chr2L_4_10205001 chr2L_10205001 D9 260 chr2L 10395456 10395512 chr2L 10395561 10395617 14 104 2.0 1.0 1.5 5.6 161 chr2L 10395456 intron Mdh1 - chr2L 10395536 intron Mdh1 - chr2L 10395617 intron Mdh1 - chr2L_14_10395001 chr2L_10395001 D9 261 chr2L 10421280 10421301 chr2L 10421394 10421415 6 113 24.0 7.5 15.8 0.4 135 chr2L 10421280 exon pie - chr2L 10421348 exon pie - chr2L 10421415 exon pie - chr2L_6_10420001 chr2L_10420001 D9 262 chr2L 10458082 10458098 chr2L 10458368 10458384 5 286 5.5 0.0 2.8 1.3 302 chr2L 10458082 intron LM408 + chr2L 10458233 intron LM408 + chr2L 10458384 intron LM408 + chr2L_5_10455001 chr2L_10455001 D9 263 chr2L 10474364 10474397 chr2L 10474470 10474492 8 104 9.0 2.5 5.8 1.2 128 chr2L 10474364 intergenic RluA-1 - chr2L 10474428 intergenic RluA-1 - chr2L 10474492 intergenic RluA-1 - chr2L_8_10470001 chr2L_10470001 D9 264 chr2L 10495287 10495313 chr2L 10495386 10495415 4 101 5.5 8.0 6.8 0.5 128 chr2L 10495287 intron Myo31DF - chr2L 10495351 intron Myo31DF - chr2L 10495415 intron Myo31DF - chr2L_4_10495001 chr2L_10495001 D9 265 chr2L 10515334 10515391 chr2L 10515452 10515509 10 118 3.0 3.5 3.2 2.4 175 chr2L 10515334 intron,intron CG45083 -,Fatp - chr2L 10515422 intron,intron CG45083 -,Fatp - chr2L 10515509 intron,intron CG45083 -,Fatp - chr2L_10_10515001 chr2L_10515001 D9 266 chr2L 10563892 10563932 chr2L 10564010 10564050 5 118 3.5 2.5 3.0 1.2 158 chr2L 10563892 intron Trim9 + chr2L 10563971 intron Trim9 + chr2L 10564050 intron Trim9 + chr2L_5_10560001 chr2L_10560001 D9 267 chr2L 10580773 10580807 chr2L 10580877 10580913 13 106 5.5 4.0 4.8 2.2 140 chr2L 10580773 intron Trim9 + chr2L 10580843 intron Trim9 + chr2L 10580913 intron Trim9 + chr2L_13_10580001 chr2L_10580001 D9 268 chr2L 10592823 10592867 chr2L 10600510 10600554 opus 12 7686 1.0 3.5 2.2 3.8 7731 chr2L 10592823 intron Trim9 + chr2L 10596688 intron Trim9 + chr2L 10600554 intron Trim9 + chr2L_12_10595001 chr2L_10595001 D9 269 chr2L 10604200 10604219 chr2L 10604307 10604324 7 106 6.0 1.0 3.5 1.6 124 chr2L 10604200 intron Trim9 + chr2L 10604262 intron Trim9 + chr2L 10604324 intron Trim9 + chr2L_7_10600001 chr2L_10600001 D9 270 chr2L 10640619 10640672 chr2L 10640733 10640786 22 113 3.5 7.5 5.5 3.4 167 chr2L 10640619 exon CG31872 + chr2L 10640702 exon CG31872 + chr2L 10640786 exon CG31872 + chr2L_22_10640001 chr2L_10640001 D9 271 chr2L 10673716 10673769 chr2L 10673823 10673874 9 107 1.0 0.5 0.8 5.0 158 chr2L 10673716 intergenic not near genes chr2L 10673795 intergenic not near genes chr2L 10673874 intergenic not near genes chr2L_9_10670001 chr2L_10670001 D9 272 chr2L 10686157 10686170 chr2L 10686267 10686280 6 110 1.5 0.0 0.8 3.3 123 chr2L 10686157 3` UTR CG7296 - chr2L 10686218 3` UTR CG7296 - chr2L 10686280 3` UTR CG7296 - chr2L_6_10685001 chr2L_10685001 D9 273 chr2L 10688535 10688572 chr2L 10688636 10688672 5 100 1.5 5.0 3.2 1.2 137 chr2L 10688535 intergenic CG7294 - chr2L 10688604 intergenic CG7294 - chr2L 10688672 intergenic CG7294 - chr2L_5_10685001 chr2L_10685001 D9 274 chr2L 10701686 10701732 chr2L 10701791 10701837 12 105 4.0 0.0 2.0 4.0 151 chr2L 10701686 intergenic Lip1 -,Lip2 - chr2L 10701762 intergenic Lip2 -,Lip1 - chr2L 10701837 intergenic Lip2 -,Lip1 - chr2L_12_10700001 chr2L_10700001 D9 275 chr2L 10723518 10723541 chr2L 10723637 10723660 7 117 2.0 0.5 1.2 3.2 142 chr2L 10723518 intergenic not near genes chr2L 10723589 intergenic not near genes chr2L 10723660 intergenic not near genes chr2L_7_10720001 chr2L_10720001 D9 276 chr2L 10787958 10788029 chr2L 10788076 10788130 4 105 0.5 4.0 2.2 1.2 172 chr2L 10787958 intron CG31869 - chr2L 10788044 intron CG31869 - chr2L 10788130 intron CG31869 - chr2L_4_10785001 chr2L_10785001 D9 277 chr2L 10836735 10836779 chr2L 10836839 10836880 6 103 3.5 1.0 2.2 1.9 145 chr2L 10836735 intron Nos - chr2L 10836808 intron Nos - chr2L 10836880 intron Nos - chr2L_6_10835001 chr2L_10835001 D9 278 chr2L 10852143 10852181 chr2L 10852257 10852295 15 114 4.0 9.5 6.8 1.9 152 chr2L 10852143 intron CG43129 + chr2L 10852219 intron CG43129 + chr2L 10852295 intron CG43129 + chr2L_15_10850001 chr2L_10850001 D9 279 chr2L 10862833 10862866 chr2L 10864468 10864505 Rt1c 18 1637 7.5 10.5 9.0 1.8 1672 chr2L 10862833 3` UTR CR43807 - chr2L 10863669 intron CR43807 - chr2L 10864505 3` UTR CR43807 - chr2L_18_10860001 chr2L_10860001 D9 280 chr2L 10876558 10876568 chr2L 10883637 10883649 297 6 7081 8.0 1.0 4.5 1.1 7091 chr2L 10876558 intergenic not near genes chr2L 10880104 intergenic not near genes chr2L 10883649 intergenic not near genes chr2L_6_10880001 chr2L_10880001 D9 281 chr2L 10930744 10930790 chr2L 10930848 10930895 10 104 0.5 7.5 4.0 2.0 151 chr2L 10930744 intron dpr2 - chr2L 10930820 intron dpr2 - chr2L 10930895 intron dpr2 - chr2L_10_10930001 chr2L_10930001 D9 282 chr2L 10945063 10945107 chr2L 10945165 10945211 34 101 10.5 10.0 10.2 3.0 148 chr2L 10945063 intron dpr2 - chr2L 10945137 intron dpr2 - chr2L 10945211 intron dpr2 - chr2L_34_10945001 chr2L_10945001 D9 283 chr2L 10946927 10946974 chr2L 10956167 10956214 roo 36 9240 10.0 10.0 10.0 3.3 9287 chr2L 10946927 intron dpr2 - chr2L 10951570 intron dpr2 - chr2L 10956214 intron dpr2 - chr2L_36_10950001 chr2L_10950001 D9 284 chr2L 11174643 11174659 chr2L 11174743 11174761 9 101 2.0 12.5 7.2 1.1 118 chr2L 11174643 intron Ca-beta - chr2L 11174702 intron Ca-beta - chr2L 11174761 intron Ca-beta - chr2L_9_11170001 chr2L_11170001 D9 285 chr2L 11194177 11194202 chr2L 11194295 11194320 6 118 36.0 51.0 43.5 0.1 143 chr2L 11194177 intron Ca-beta - chr2L 11194248 intron Ca-beta - chr2L 11194320 intron Ca-beta - chr2L_6_11190001 chr2L_11190001 D9 286 chr2L 11224038 11224089 chr2L 11224174 11224225 12 136 2.0 4.0 3.0 3.0 187 chr2L 11224038 intron ab + chr2L 11224132 intron ab + chr2L 11224225 intron ab + chr2L_12_11220001 chr2L_11220001 D9 287 chr2L 11228180 11228204 chr2L 11228279 11228305 12 101 13.5 12.5 13.0 0.9 125 chr2L 11228180 intron ab + chr2L 11228242 intron ab + chr2L 11228305 intron ab + chr2L_12_11225001 chr2L_11225001 D9 288 chr2L 11248547 11248591 chr2L 11248654 11248697 20 107 21.5 24.0 22.8 0.8 150 chr2L 11248547 intron ab + chr2L 11248622 intron ab + chr2L 11248697 intron ab + chr2L_20_11245001 chr2L_11245001 D9 289 chr2L 11292359 11292407 chr2L 11292465 11292512 8 106 17.0 12.5 14.8 0.5 153 chr2L 11292359 intergenic not near genes chr2L 11292436 intergenic not near genes chr2L 11292512 intergenic not near genes chr2L_8_11290001 chr2L_11290001 D9 290 chr2L 11295987 11296018 chr2L 11296203 11296234 7 216 22.5 4.0 13.2 0.5 247 chr2L 11295987 intergenic not near genes chr2L 11296110 intergenic not near genes chr2L 11296234 intergenic not near genes chr2L_7_11295001 chr2L_11295001 D9 291 chr2L 11315244 11315268 chr2L 11317673 11317697 G2 8 2429 7.0 6.5 6.8 1.0 2453 chr2L 11315244 intergenic not near genes chr2L 11316470 intergenic not near genes chr2L 11317697 intergenic not near genes chr2L_8_11315001 chr2L_11315001 D9 292 chr2L 11339715 11339936 chr2L 11339817 11340037 16 100 14.0 18.0 16.0 0.9 322 chr2L 11339715 intergenic not near genes chr2L 11339876 intergenic not near genes chr2L 11340037 intergenic not near genes chr2L_16_11335001 chr2L_11335001 D9 293 chr2L 11363096 11363112 chr2L 11363209 11363225 6 112 12.0 17.5 14.8 0.4 129 chr2L 11363096 intron salr + chr2L 11363160 intron salr + chr2L 11363225 intron salr + chr2L_6_11360001 chr2L_11360001 D9 294 chr2L 11378573 11378605 chr2L 11378693 11378725 11 119 17.0 21.0 19.0 0.6 152 chr2L 11378573 intergenic not near genes chr2L 11378649 intergenic not near genes chr2L 11378725 intergenic not near genes chr2L_11_11375001 chr2L_11375001 D9 295 chr2L 11379922 11379977 chr2L 11380029 11380084 5 107 3.5 0.0 1.8 1.8 162 chr2L 11379922 intergenic not near genes chr2L 11380003 intergenic not near genes chr2L 11380084 intergenic not near genes chr2L_5_11380001 chr2L_11380001 D9 296 chr2L 11380590 11380862 chr2L 11380691 11380990 25 104 5.0 4.5 4.8 4.3 400 chr2L 11380590 intergenic not near genes chr2L 11380790 intergenic not near genes chr2L 11380990 intergenic not near genes chr2L_25_11380001 chr2L_11380001 D9 297 chr2L 11380866 11380876 chr2L 11380991 11381004 6 127 6.5 21.0 13.8 0.4 138 chr2L 11380866 intergenic not near genes chr2L 11380935 intergenic not near genes chr2L 11381004 intergenic not near genes chr2L_6_11380001 chr2L_11380001 D9 298 chr2L 11399510 11399533 chr2L 11399610 11399635 9 100 7.5 0.0 3.8 1.9 125 chr2L 11399510 intergenic not near genes chr2L 11399572 intergenic not near genes chr2L 11399635 intergenic not near genes chr2L_9_11395001 chr2L_11395001 D9 299 chr2L 11418632 11418688 chr2L 11418736 11418792 14 104 17.5 17.0 17.2 0.8 160 chr2L 11418632 intergenic not near genes chr2L 11418712 intergenic not near genes chr2L 11418792 intergenic not near genes chr2L_14_11415001 chr2L_11415001 D9 300 chr2L 11450107 11450155 chr2L 11450218 11450262 8 109 0.0 3.5 1.8 2.9 155 chr2L 11450107 intergenic not near genes chr2L 11450184 intergenic not near genes chr2L 11450262 intergenic not near genes chr2L_8_11450001 chr2L_11450001 D9 301 chr2L 11476241 11476289 chr2L 11476346 11476394 14 105 10.0 20.5 15.2 0.9 153 chr2L 11476241 intergenic not near genes chr2L 11476318 intergenic not near genes chr2L 11476394 intergenic not near genes chr2L_14_11475001 chr2L_11475001 D9 302 chr2L 11476952 11477006 chr2L 11477054 11477108 7 102 8.5 8.0 8.2 0.8 156 chr2L 11476952 intergenic not near genes chr2L 11477030 intergenic not near genes chr2L 11477108 intergenic not near genes chr2L_7_11475001 chr2L_11475001 D9 303 chr2L 11491103 11491159 chr2L 11491207 11491264 25 105 6.5 6.0 6.2 3.5 161 chr2L 11491103 intergenic not near genes chr2L 11491184 intergenic not near genes chr2L 11491264 intergenic not near genes chr2L_25_11490001 chr2L_11490001 D9 304 chr2L 11492987 11492994 chr2L 11493152 11493159 6 165 0.0 3.5 1.8 2.1 172 chr2L 11492987 intergenic not near genes chr2L 11493073 intergenic not near genes chr2L 11493159 intergenic not near genes chr2L_6_11490001 chr2L_11490001 D9 305 chr2L 11537181 11537208 chr2L 11537287 11537308 9 104 5.5 24.0 14.8 0.6 127 chr2L 11537181 intergenic CG43438 + chr2L 11537244 intergenic CG43438 + chr2L 11537308 intergenic CG43438 + chr2L_9_11535001 chr2L_11535001 D9 306 chr2L 11537734 11537772 chr2L 11537876 11537914 5 142 19.5 11.5 15.5 0.3 180 chr2L 11537734 intergenic not near genes chr2L 11537824 intergenic not near genes chr2L 11537914 intergenic not near genes chr2L_5_11535001 chr2L_11535001 D9 307 chr2L 11555387 11555427 chr2L 11555532 11555571 4 144 17.5 4.5 11.0 0.3 184 chr2L 11555387 intergenic not near genes chr2L 11555479 intergenic not near genes chr2L 11555571 intergenic not near genes chr2L_4_11555001 chr2L_11555001 D9 308 chr2L 11563619 11563659 chr2L 11568848 11568888 copia 20 5229 8.5 9.0 8.8 2.0 5269 chr2L 11563619 intergenic not near genes chr2L 11566254 intergenic not near genes chr2L 11568888 intergenic not near genes chr2L_20_11565001 chr2L_11565001 D9 309 chr2L 11584655 11584660 chr2L 11584760 11584763 4 104 24.0 31.0 27.5 0.1 108 chr2L 11584655 intron kek2 + chr2L 11584709 intron kek2 + chr2L 11584763 intron kek2 + chr2L_4_11580001 chr2L_11580001 D9 310 chr2L 11614042 11614080 chr2L 11615547 11615600 hopper2 18 1517 4.5 3.5 4.0 3.6 1558 chr2L 11614042 intron kek2 + chr2L 11614821 intron kek2 + chr2L 11615600 intron kek2 + chr2L_18_11610001 chr2L_11610001 D9 311 chr2L 11657949 11658000 chr2L 11658059 11658110 17 109 16.5 23.0 19.8 0.8 161 chr2L 11657949 3` UTR CG43167 + chr2L 11658030 intergenic CG43167 + chr2L 11658110 intergenic CG43167 + chr2L_17_11655001 chr2L_11655001 D9 312 chr2L 11684537 11684548 chr2L 11684638 11684646 5 101 27.5 28.5 28.0 0.2 109 chr2L 11684537 intergenic not near genes chr2L 11684592 intergenic not near genes chr2L 11684646 intergenic not near genes chr2L_5_11680001 chr2L_11680001 D9 313 chr2L 11707058 11707074 chr2L 11707188 11707202 5 130 2.5 4.5 3.5 1.1 144 chr2L 11707058 intergenic not near genes chr2L 11707130 intergenic not near genes chr2L 11707202 intergenic not near genes chr2L_5_11705001 chr2L_11705001 D9 314 chr2L 11713482 11713539 chr2L 11720975 11720984 blood 18 7490 8.5 3.5 6.0 2.6 7502 chr2L 11713482 intergenic not near genes chr2L 11717233 intergenic not near genes chr2L 11720984 intergenic CR44143 + chr2L_18_11715001 chr2L_11715001 D9 315 chr2L 11721553 11721584 chr2L 11723307 11723340 7 1755 20.5 13.0 16.8 0.4 1787 chr2L 11721553 5` UTR CR44143 + chr2L 11722446 intergenic CR44143 + chr2L 11723340 intergenic not near genes chr2L_7_11720001 chr2L_11720001 D9 316 chr2L 11750302 11750342 chr2L 11750613 11750653 14 311 5.0 4.5 4.8 2.4 351 chr2L 11750302 intergenic not near genes chr2L 11750478 intergenic not near genes chr2L 11750653 intergenic not near genes chr2L_14_11750001 chr2L_11750001 D9 317 chr2L 11770573 11770625 chr2L 11770685 11770735 10 111 10.5 10.5 10.5 0.9 162 chr2L 11770573 intergenic not near genes chr2L 11770654 intergenic not near genes chr2L 11770735 intergenic not near genes chr2L_10_11770001 chr2L_11770001 D9 318 chr2L 11783604 11783645 chr2L 11783731 11783772 10 127 12.0 8.5 10.2 0.9 168 chr2L 11783604 intergenic not near genes chr2L 11783688 intergenic not near genes chr2L 11783772 intergenic not near genes chr2L_10_11780001 chr2L_11780001 D9 319 chr2L 11794931 11794976 chr2L 11795040 11795085 12 109 9.0 10.0 9.5 1.1 154 chr2L 11794931 3` UTR crol - chr2L 11795008 3` UTR crol - chr2L 11795085 3` UTR crol - chr2L_12_11795001 chr2L_11795001 D9 320 chr2L 11808642 11808690 chr2L 11808743 11808791 15 101 11.0 22.0 16.5 0.9 149 chr2L 11808642 intron crol - chr2L 11808716 intron crol - chr2L 11808791 intron crol - chr2L_15_11805001 chr2L_11805001 D9 321 chr2L 11820427 11820464 chr2L 11820531 11820570 11 106 0.0 5.0 2.5 3.1 143 chr2L 11820427 intron Pde1c - chr2L 11820498 intron Pde1c - chr2L 11820570 intron Pde1c - chr2L_11_11820001 chr2L_11820001 D9 322 chr2L 11825683 11825696 chr2L 11825787 11825800 6 103 8.5 0.0 4.2 1.2 117 chr2L 11825683 intron Pde1c - chr2L 11825742 intron Pde1c - chr2L 11825800 intron Pde1c - chr2L_6_11825001 chr2L_11825001 D9 323 chr2L 11841349 11841387 chr2L 11841452 11841490 5 103 1.0 0.0 0.5 3.3 141 chr2L 11841349 intron Pde1c - chr2L 11841420 intron Pde1c - chr2L 11841490 intron Pde1c - chr2L_5_11840001 chr2L_11840001 D9 324 chr2L 11844182 11844203 chr2L 11844289 11844310 7 107 12.5 17.5 15.0 0.4 128 chr2L 11844182 intron Pde1c - chr2L 11844246 intron Pde1c - chr2L 11844310 intron Pde1c - chr2L_7_11840001 chr2L_11840001 D9 325 chr2L 11862342 11862380 chr2L 11862460 11862498 8 118 8.5 13.5 11.0 0.7 156 chr2L 11862342 intron Pde1c - chr2L 11862420 intron Pde1c - chr2L 11862498 intron Pde1c - chr2L_8_11860001 chr2L_11860001 D9 326 chr2L 11892524 11892799 chr2L 11892638 11892916 20 116 23.5 16.5 20.0 1.0 392 chr2L 11892524 intron Pde1c - chr2L 11892720 intron Pde1c - chr2L 11892916 intron Pde1c - chr2L_20_11890001 chr2L_11890001 D9 327 chr2L 11913272 11913311 chr2L 11913398 11913437 5 126 15.0 10.5 12.8 0.4 165 chr2L 11913272 intron Pde1c - chr2L 11913354 intron Pde1c - chr2L 11913437 intron Pde1c - chr2L_5_11910001 chr2L_11910001 D9 328 chr2L 11959565 11959618 chr2L 11959709 11959739 17 142 31.0 27.5 29.2 0.6 174 chr2L 11959565 3` UTR CR43314 - chr2L 11959652 3` UTR CR43314 - chr2L 11959739 3` UTR CR43314 - chr2L_17_11955001 chr2L_11955001 D9 329 chr2L 11960283 11960331 chr2L 11960401 11960449 9 118 13.0 6.0 9.5 0.9 166 chr2L 11960283 3` UTR CR43314 - chr2L 11960366 3` UTR CR43314 - chr2L 11960449 3` UTR CR43314 - chr2L_9_11960001 chr2L_11960001 D9 330 chr2L 11976073 11976105 chr2L 11976175 11976207 8 102 16.0 11.5 13.8 0.5 134 chr2L 11976073 intergenic not near genes chr2L 11976140 intergenic not near genes chr2L 11976207 intergenic not near genes chr2L_8_11975001 chr2L_11975001 D9 331 chr2L 12012543 12012550 chr2L 12012651 12012659 5 107 58.0 44.0 51.0 0.1 116 chr2L 12012543 intergenic not near genes chr2L 12012601 intergenic not near genes chr2L 12012659 intergenic not near genes chr2L_5_12010001 chr2L_12010001 D9 332 chr2L 12012536 12012572 chr2L 12012662 12012678 6 109 57.5 45.5 51.5 0.1 142 chr2L 12012536 intergenic not near genes chr2L 12012607 intergenic not near genes chr2L 12012678 intergenic not near genes chr2L_6_12010001 chr2L_12010001 D9 333 chr2L 12067312 12067353 chr2L 12074388 12074421 297 6 7074 3.0 1.5 2.2 1.9 7109 chr2L 12067312 intergenic not near genes chr2L 12070866 intergenic not near genes chr2L 12074421 intergenic not near genes chr2L_6_12070001 chr2L_12070001 D9 334 chr2L 12153999 12154045 chr2L 12154499 12154545 7 500 15.5 17.5 16.5 0.4 546 chr2L 12153999 intron CG31760 + chr2L 12154272 intron CG31760 + chr2L 12154545 intron CG31760 + chr2L_7_12150001 chr2L_12150001 D9 335 chr2L 12192334 12192368 chr2L 12192484 12192518 5 150 11.5 7.0 9.2 0.5 184 chr2L 12192334 intron aret + chr2L 12192426 intron aret + chr2L 12192518 intron aret + chr2L_5_12190001 chr2L_12190001 D9 336 chr2L 12210029 12210045 chr2L 12210142 12210158 8 114 8.5 7.5 8.0 0.9 129 chr2L 12210029 intron aret + chr2L 12210094 intron aret + chr2L 12210158 intron aret + chr2L_8_12210001 chr2L_12210001 D9 337 chr2L 12229555 12229605 chr2L 12229654 12229707 8 102 9.0 8.0 8.5 0.8 152 chr2L 12229555 intron aret + chr2L 12229631 intron aret + chr2L 12229707 intron aret + chr2L_8_12225001 chr2L_12225001 D9 338 chr2L 12234018 12234062 chr2L 12234136 12234182 8 120 9.5 13.5 11.5 0.6 164 chr2L 12234018 intron aret + chr2L 12234100 intron aret + chr2L 12234182 intron aret + chr2L_8_12230001 chr2L_12230001 D9 339 chr2L 12241613 12241621 chr2L 12241715 12241723 5 102 38.0 26.0 32.0 0.2 110 chr2L 12241613 intron aret + chr2L 12241668 intron aret + chr2L 12241723 intron aret + chr2L_5_12240001 chr2L_12240001 D9 340 chr2L 12315636 12315690 chr2L 12316126 12316179 9 488 1.0 2.0 1.5 3.6 543 chr2L 12315636 intergenic CR45282 - chr2L 12315908 3` UTR CR45282 - chr2L 12316179 intergenic CR45282 -,CR45283 - chr2L_9_12315001 chr2L_12315001 D9 341 chr2L 12322745 12322798 chr2L 12322844 12322899 21 101 4.0 5.0 4.5 3.8 154 chr2L 12322745 intergenic not near genes chr2L 12322822 intergenic not near genes chr2L 12322899 intergenic not near genes chr2L_21_12320001 chr2L_12320001 D9 342 chr2L 12345382 12345405 chr2L 12345485 12345508 14 103 18.0 9.0 13.5 1.0 126 chr2L 12345382 intron bru-2 + chr2L 12345445 intron bru-2 + chr2L 12345508 intron bru-2 + chr2L_14_12345001 chr2L_12345001 D9 343 chr2L 12361009 12361038 chr2L 12361187 12361216 8 178 4.5 4.5 4.5 1.5 207 chr2L 12361009 intron bru-2 + chr2L 12361112 intron bru-2 + chr2L 12361216 intron bru-2 + chr2L_8_12360001 chr2L_12360001 D9 344 chr2L 12418402 12418436 chr2L 12418510 12418544 20 106 6.0 5.0 5.5 3.1 142 chr2L 12418402 intron vir-1 - chr2L 12418473 intron vir-1 - chr2L 12418544 intron vir-1 - chr2L_20_12415001 chr2L_12415001 D9 345 chr2L 12426109 12426162 chr2L 12426216 12426270 28 107 9.0 6.5 7.8 3.2 161 chr2L 12426109 exon CG6405 + chr2L 12426190 exon CG6405 + chr2L 12426270 exon CG6405 + chr2L_28_12425001 chr2L_12425001 D9 346 chr2L 12487866 12487918 chr2L 12487972 12488024 22 106 6.5 7.0 6.8 2.8 158 chr2L 12487866 intron bun - chr2L 12487945 intron bun - chr2L 12488024 intron bun - chr2L_22_12485001 chr2L_12485001 D9 347 chr2L 12529207 12529266 chr2L 12529384 12529423 18 175 3.5 3.5 3.5 4.0 216 chr2L 12529207 intron bun - chr2L 12529315 intron bun - chr2L 12529423 intron bun - chr2L_18_12525001 chr2L_12525001 D9 348 chr2L 12558294 12558350 chr2L 12565448 12565504 HMS-Beagle 12 7154 1.5 0.0 0.8 6.7 7210 chr2L 12558294 intergenic not near genes chr2L 12561899 intergenic not near genes chr2L 12565504 intergenic not near genes chr2L_12_12560001 chr2L_12560001 D9 349 chr2L 12653761 12653811 chr2L 12653903 12653951 23 142 5.5 7.0 6.2 3.2 190 chr2L 12653761 intergenic not near genes chr2L 12653856 intergenic not near genes chr2L 12653951 intergenic not near genes chr2L_23_12650001 chr2L_12650001 D9 350 chr2L 12728901 12728944 chr2L 12729165 12729207 pogo 14 263 8.5 5.5 7.0 1.8 306 chr2L 12728901 intron MRP + chr2L 12729054 intron MRP + chr2L 12729207 exon MRP + chr2L_14_12725001 chr2L_12725001 D9 351 chr2L 12731038 12731087 chr2L 12735830 12735879 F-element 19 4791 5.0 7.0 6.0 2.7 4841 chr2L 12731038 intron MRP + chr2L 12733458 intron MRP + chr2L 12735879 intron MRP + chr2L_19_12730001 chr2L_12730001 D9 352 chr2L 12739154 12739201 chr2L 12743960 12744004 Doc 33 4806 12.5 13.5 13.0 2.4 4850 chr2L 12739154 exon MRP + chr2L 12741579 intron MRP + chr2L 12744004 exon MRP + chr2L_33_12740001 chr2L_12740001 D9 353 chr2L 12751286 12751338 chr2L 12751394 12751446 20 108 4.0 5.0 4.5 3.6 160 chr2L 12751286 intergenic not near genes chr2L 12751366 intergenic not near genes chr2L 12751446 intergenic not near genes chr2L_20_12750001 chr2L_12750001 D9 354 chr2L 12766734 12766776 chr2L 12766837 12766879 14 103 2.5 0.0 1.2 6.4 145 chr2L 12766734 intergenic not near genes chr2L 12766806 intergenic not near genes chr2L 12766879 intergenic not near genes chr2L_14_12765001 chr2L_12765001 D9 355 chr2L 12781777 12781814 chr2L 12789252 12789289 Quasimodo 16 7475 9.0 2.5 5.8 2.4 7512 chr2L 12781777 intergenic not near genes chr2L 12785533 intergenic not near genes chr2L 12789289 intergenic not near genes chr2L_16_12785001 chr2L_12785001 D9 356 chr2L 12791587 12791628 chr2L 12795287 12795328 F-element 7 3699 4.5 2.5 3.5 1.6 3741 chr2L 12791587 intergenic not near genes chr2L 12793458 intergenic not near genes chr2L 12795328 intergenic not near genes chr2L_7_12790001 chr2L_12790001 D9 357 chr2L 12811463 12811472 chr2L 12811586 12811594 4 123 0.0 9.5 4.8 0.7 131 chr2L 12811463 intergenic not near genes chr2L 12811528 intergenic not near genes chr2L 12811594 intergenic not near genes chr2L_4_12810001 chr2L_12810001 D9 358 chr2L 12811959 12812013 chr2L 12812092 12812146 32 133 4.5 8.5 6.5 4.3 187 chr2L 12811959 intergenic not near genes chr2L 12812052 intergenic not near genes chr2L 12812146 intergenic not near genes chr2L_32_12810001 chr2L_12810001 D9 359 chr2L 12846858 12846907 chr2L 12846982 12847028 22 123 6.5 14.0 10.2 2.0 170 chr2L 12846858 intergenic not near genes chr2L 12846943 intergenic not near genes chr2L 12847028 intergenic not near genes chr2L_22_12845001 chr2L_12845001 D9 360 chr2L 12861670 12861727 chr2L 12863162 12863219 hobo 29 1492 7.5 5.5 6.5 3.9 1549 chr2L 12861670 intergenic not near genes chr2L 12862444 intergenic not near genes chr2L 12863219 intergenic not near genes chr2L_29_12860001 chr2L_12860001 D9 361 chr2L 12889006 12889059 chr2L 12889114 12889164 19 107 4.0 7.5 5.8 2.8 158 chr2L 12889006 intergenic not near genes chr2L 12889085 intergenic not near genes chr2L 12889164 intergenic not near genes chr2L_19_12885001 chr2L_12885001 D9 362 chr2L 12894003 12894050 chr2L 12895495 12895542 hobo 24 1491 9.0 12.0 10.5 2.1 1539 chr2L 12894003 intergenic not near genes chr2L 12894772 intergenic not near genes chr2L 12895542 intergenic not near genes chr2L_24_12890001 chr2L_12890001 D9 363 chr2L 12905453 12905494 chr2L 12905561 12905599 9 108 3.5 3.0 3.2 2.1 146 chr2L 12905453 intergenic not near genes chr2L 12905526 intergenic not near genes chr2L 12905599 intergenic not near genes chr2L_9_12905001 chr2L_12905001 D9 364 chr2L 12933829 12933882 chr2L 12941319 12941373 blood 33 7492 10.5 9.0 9.8 3.1 7544 chr2L 12933829 intergenic not near genes chr2L 12937601 intergenic not near genes chr2L 12941373 intergenic not near genes chr2L_33_12935001 chr2L_12935001 D9 365 chr2L 12949237 12949248 chr2L 12949353 12949366 4 118 23.0 9.0 16.0 0.2 129 chr2L 12949237 intergenic not near genes chr2L 12949302 intergenic not near genes chr2L 12949366 intergenic not near genes chr2L_4_12945001 chr2L_12945001 D9 366 chr2L 12949249 12949285 chr2L 12949351 12949367 14 112 12.0 8.5 10.2 1.2 118 chr2L 12949249 intergenic not near genes chr2L 12949308 intergenic not near genes chr2L 12949367 intergenic not near genes chr2L_14_12945001 chr2L_12945001 D9 367 chr2L 12955850 12955904 chr2L 12956074 12956129 31 224 6.5 4.5 5.5 4.8 279 chr2L 12955850 intergenic not near genes chr2L 12955990 intergenic not near genes chr2L 12956129 intergenic not near genes chr2L_31_12955001 chr2L_12955001 D9 368 chr2L 13043379 13043422 chr2L 13043483 13043525 6 103 5.5 5.5 5.5 0.9 146 chr2L 13043379 intron CG9932 - chr2L 13043452 intron CG9932 - chr2L 13043525 intron CG9932 - chr2L_6_13040001 chr2L_13040001 D9 369 chr2L 13109429 13109477 chr2L 13109582 13109630 22 153 3.5 4.0 3.8 4.6 201 chr2L 13109429 3` UTR CG5142 + chr2L 13109530 intergenic CG5142 + chr2L 13109630 intergenic CG5142 + chr2L_22_13105001 chr2L_13105001 D9 370 chr2L 13152207 13152215 chr2L 13152310 13152318 9 103 20.5 6.0 13.2 0.6 111 chr2L 13152207 intergenic not near genes chr2L 13152262 intergenic not near genes chr2L 13152318 intergenic not near genes chr2L_9_13150001 chr2L_13150001 D9 371 chr2L 13152216 13152239 chr2L 13152305 13152342 12 102 15.0 7.0 11.0 1.0 126 chr2L 13152216 intergenic not near genes chr2L 13152279 intergenic not near genes chr2L 13152342 intergenic not near genes chr2L_12_13150001 chr2L_13150001 D9 372 chr2L 13215363 13215412 chr2L 13215663 13215712 16 300 3.5 5.5 4.5 2.9 349 chr2L 13215363 intergenic kek4 -,snRNA:U2:34ABb +,snRNA:U2:34ABc + chr2L 13215538 intergenic kek4 -,snRNA:U2:34ABb +,snRNA:U2:34ABc + chr2L 13215712 intergenic snRNA:U2:34ABb +,snRNA:U2:34ABc +,kek4 - chr2L_16_13215001 chr2L_13215001 D9 373 chr2L 13358234 13358267 chr2L 13358340 13358368 14 106 15.5 14.0 14.8 0.9 134 chr2L 13358234 intergenic not near genes chr2L 13358301 intergenic not near genes chr2L 13358368 intergenic not near genes chr2L_14_13355001 chr2L_13355001 D9 374 chr2L 13398692 13398749 chr2L 13398797 13398854 6 105 0.5 2.5 1.5 2.4 162 chr2L 13398692 intergenic CG10859 -,CR44600 -,CG7110 + chr2L 13398773 intergenic CR44600 -,CG10859 -,CG7110 + chr2L 13398854 intergenic CR44600 -,CG7110 +,CG10859 - chr2L_6_13395001 chr2L_13395001 D9 375 chr2L 13405627 13405672 chr2L 13410449 13410494 Doc 11 4822 12.5 3.5 8.0 1.2 4867 chr2L 13405627 exon CG7110 + chr2L 13408060 intron CG7110 + chr2L 13410494 intron CG7110 + chr2L_11_13405001 chr2L_13405001 D9 376 chr2L 13422423 13422503 chr2L 13422549 13422607 10 106 0.0 3.0 1.5 4.0 184 chr2L 13422423 intron CG42784 + chr2L 13422515 intron CG42784 + chr2L 13422607 intron CG42784 + chr2L_10_13420001 chr2L_13420001 D9 377 chr2L 13449442 13449492 chr2L 13456903 13456953 Quasimodo 22 7460 3.0 10.0 6.5 2.9 7511 chr2L 13449442 intron,5` UTR CG42784 +,Hsp60D - chr2L 13453198 intron CG42784 + chr2L 13456953 intron CG42784 + chr2L_22_13450001 chr2L_13450001 D9 378 chr2L 13481434 13481468 chr2L 13482066 13482100 jockey 20 632 12.0 18.5 15.2 1.2 666 chr2L 13481434 intron CG42784 + chr2L 13481767 intron CG42784 + chr2L 13482100 intron CG42784 + chr2L_20_13480001 chr2L_13480001 D9 379 chr2L 13522265 13522280 chr2L 13527596 13527611 Transpac 4 5330 2.0 5.5 3.8 0.8 5346 chr2L 13522265 intron B4 - chr2L 13524938 intron B4 - chr2L 13527611 intron B4 - chr2L_4_13520001 chr2L_13520001 D9 380 chr2L 13528691 13528713 chr2L 13528793 13528815 6 102 0.5 2.5 1.5 2.4 124 chr2L 13528691 intron B4 - chr2L 13528753 intron B4 - chr2L 13528815 intron B4 - chr2L_6_13525001 chr2L_13525001 D9 381 chr2L 13690711 13690754 chr2L 13693116 13693160 18 2406 19.0 32.5 25.8 0.7 2449 chr2L 13690711 intron CG31814 - chr2L 13691936 intron CG31814 - chr2L 13693160 intron CG31814 - chr2L_18_13690001 chr2L_13690001 D9 382 chr2L 13690520 13690579 chr2L 13693949 13694008 8 3430 39.5 16.0 27.8 0.3 3488 chr2L 13690520 exon CG31814 - chr2L 13692264 intron CG31814 - chr2L 13694008 intron CG31814 - chr2L_8_13690001 chr2L_13690001 D9 383 chr2L 13749195 13749210 chr2L 13749303 13749318 7 108 0.0 1.0 0.5 4.7 123 chr2L 13749195 intron,intron CR44846 +,TM9SF4 + chr2L 13749256 intron,intron CR44846 +,TM9SF4 + chr2L 13749318 intron,intron CR44846 +,TM9SF4 + chr2L_7_13745001 chr2L_13745001 D9 384 chr2L 13761785 13761813 chr2L 13762921 13762946 Doc 6 1136 8.5 5.0 6.8 0.8 1161 chr2L 13761785 intron TM9SF4 + chr2L 13762366 intron TM9SF4 + chr2L 13762946 intron TM9SF4 + chr2L_6_13760001 chr2L_13760001 D9 385 chr2L 13800157 13800204 chr2L 13800286 13800333 10 129 1.5 5.5 3.5 2.2 176 chr2L 13800157 intergenic Sec71 + chr2L 13800245 intergenic not near genes chr2L 13800333 intergenic not near genes chr2L_10_13800001 chr2L_13800001 D9 386 chr2L 13853068 13853110 chr2L 13862243 13862285 roo 13 9175 6.5 0.0 3.2 3.1 9217 chr2L 13853068 intron CenG1A + chr2L 13857676 intron CenG1A + chr2L 13862285 intron CenG1A + chr2L_13_13855001 chr2L_13855001 D9 387 chr2L 13952129 13952174 chr2L 13952234 13952281 4 106 2.5 1.5 2.0 1.3 152 chr2L 13952129 intron Ance-3 + chr2L 13952205 intron Ance-3 + chr2L 13952281 intron Ance-3 + chr2L_4_13950001 chr2L_13950001 D9 388 chr2L 13974744 13974795 chr2L 13975172 13975222 45 427 14.0 12.5 13.2 3.2 478 chr2L 13974744 exon NimC1 - chr2L 13974983 exon NimC1 - chr2L 13975222 exon NimC1 - chr2L_45_13970001 chr2L_13970001 D9 389 chr2L 13981493 13981549 chr2L 13981609 13981663 18 115 7.0 11.0 9.0 1.8 170 chr2L 13981493 exon NimC2 + chr2L 13981578 intron NimC2 + chr2L 13981663 intron NimC2 + chr2L_18_13980001 chr2L_13980001 D9 390 chr2L 13988257 13988304 chr2L 13988369 13988416 9 111 6.5 6.5 6.5 1.2 159 chr2L 13988257 intron rk - chr2L 13988336 intron rk - chr2L 13988416 intron rk - chr2L_9_13985001 chr2L_13985001 D9 391 chr2L 14000056 14000096 chr2L 14000160 14000200 8 103 12.5 10.5 11.5 0.6 144 chr2L 14000056 intron rk - chr2L 14000128 intron rk - chr2L 14000200 intron rk - chr2L_8_14000001 chr2L_14000001 D9 392 chr2L 14017745 14017798 chr2L 14017862 14017915 8 117 13.5 14.5 14.0 0.5 170 chr2L 14017745 intron bgm + chr2L 14017830 intron bgm + chr2L 14017915 intron bgm + chr2L_8_14015001 chr2L_14015001 D9 393 chr2L 14112724 14112773 chr2L 14112840 14112856 6 110 11.0 4.0 7.5 0.7 132 chr2L 14112724 intergenic not near genes chr2L 14112790 intergenic not near genes chr2L 14112856 intergenic not near genes chr2L_6_14110001 chr2L_14110001 D9 394 chr2L 14125949 14125998 chr2L 14126057 14126106 17 107 24.0 28.0 26.0 0.6 157 chr2L 14125949 intergenic not near genes chr2L 14126028 intergenic not near genes chr2L 14126106 intergenic not near genes chr2L_17_14125001 chr2L_14125001 D9 395 chr2L 14222278 14222330 chr2L 14222389 14222442 7 112 9.0 11.0 10.0 0.6 164 chr2L 14222278 intron Dyrk2 - chr2L 14222360 intron Dyrk2 - chr2L 14222442 intron Dyrk2 - chr2L_7_14220001 chr2L_14220001 D9 396 chr2L 14246257 14246296 chr2L 14246359 14246399 4 102 6.0 5.5 5.8 0.6 142 chr2L 14246257 intergenic not near genes chr2L 14246328 intergenic not near genes chr2L 14246399 intergenic not near genes chr2L_4_14245001 chr2L_14245001 D9 397 chr2L 14367791 14367842 chr2L 14367943 14367992 10 152 6.0 3.5 4.8 1.7 201 chr2L 14367791 intergenic not near genes chr2L 14367892 intergenic not near genes chr2L 14367992 intergenic not near genes chr2L_10_14365001 chr2L_14365001 D9 398 chr2L 14410013 14410064 chr2L 14410133 14410184 11 120 3.0 3.0 3.0 2.8 171 chr2L 14410013 5` UTR CR44733 + chr2L 14410098 intergenic CR44733 + chr2L 14410184 intergenic CR44733 + chr2L_11_14410001 chr2L_14410001 D9 399 chr2L 14503409 14503432 chr2L 14503513 14503536 7 103 4.0 1.0 2.5 2.0 127 chr2L 14503409 intergenic not near genes chr2L 14503472 intergenic not near genes chr2L 14503536 intergenic not near genes chr2L_7_14500001 chr2L_14500001 D9 400 chr2L 14564174 14564225 chr2L 14564275 14564326 27 101 10.5 11.0 10.8 2.3 152 chr2L 14564174 intergenic CG3473 - chr2L 14564250 intergenic not near genes chr2L 14564326 intergenic not near genes chr2L_27_14560001 chr2L_14560001 D9 401 chr2L 14570704 14570709 chr2L 14570808 14570815 5 105 7.0 9.5 8.2 0.5 111 chr2L 14570704 intergenic not near genes chr2L 14570760 intergenic not near genes chr2L 14570815 intergenic not near genes chr2L_5_14570001 chr2L_14570001 D9 402 chr2L 14588360 14588417 chr2L 14588539 14588596 19 179 3.0 3.5 3.2 4.5 236 chr2L 14588360 intergenic CG42680 - chr2L 14588478 intergenic CG42680 - chr2L 14588596 intergenic CG42680 - chr2L_19_14585001 chr2L_14585001 D9 403 chr2L 14642550 14642596 chr2L 14651738 14651784 roo 16 9188 8.5 6.5 7.5 1.9 9234 chr2L 14642550 intron osp - chr2L 14647167 intron osp - chr2L 14651784 intron osp - chr2L_16_14645001 chr2L_14645001 D9 404 chr2L 14694238 14694287 chr2L 14694382 14694436 10 148 5.5 6.5 6.0 1.4 198 chr2L 14694238 intergenic not near genes chr2L 14694337 intergenic not near genes chr2L 14694436 intergenic not near genes chr2L_10_14690001 chr2L_14690001 D9 405 chr2L 14778785 14778839 chr2L 14779098 14779149 33 312 11.0 11.0 11.0 2.8 364 chr2L 14778785 intergenic not near genes chr2L 14778967 intergenic not near genes chr2L 14779149 intergenic not near genes chr2L_33_14775001 chr2L_14775001 D9 406 chr2L 14803854 14803907 chr2L 14809082 14809132 copia 19 5228 5.5 4.5 5.0 3.2 5278 chr2L 14803854 intergenic not near genes chr2L 14806493 intergenic not near genes chr2L 14809132 intergenic not near genes chr2L_19_14805001 chr2L_14805001 D9 407 chr2L 14833774 14833819 chr2L 14833903 14833948 6 128 1.0 5.5 3.2 1.4 174 chr2L 14833774 intergenic not near genes chr2L 14833861 intergenic not near genes chr2L 14833948 intergenic not near genes chr2L_6_14830001 chr2L_14830001 D9 408 chr2L 14840951 14841009 chr2L 14841064 14841121 18 110 0.5 6.5 3.5 4.0 170 chr2L 14840951 3` UTR CR43805 - chr2L 14841036 3` UTR CR43805 - chr2L 14841121 3` UTR CR43805 - chr2L_18_14840001 chr2L_14840001 D9 409 chr2L 14854575 14854612 chr2L 14854685 14854722 19 110 12.5 3.0 7.8 2.2 147 chr2L 14854575 intergenic not near genes chr2L 14854648 intergenic not near genes chr2L 14854722 intergenic not near genes chr2L_19_14850001 chr2L_14850001 D9 410 chr2L 14889927 14889960 chr2L 14890377 14890410 jockey 12 450 10.5 3.0 6.8 1.5 483 chr2L 14889927 intergenic not near genes chr2L 14890168 intergenic not near genes chr2L 14890410 intergenic not near genes chr2L_12_14890001 chr2L_14890001 D9 411 chr2L 14933350 14933399 chr2L 14933453 14933502 7 103 5.5 5.0 5.2 1.1 152 chr2L 14933350 intron CG42313 - chr2L 14933426 intron CG42313 - chr2L 14933502 intron CG42313 - chr2L_7_14930001 chr2L_14930001 D9 412 chr2L 15000854 15000913 chr2L 15000955 15001014 22 102 42.0 35.5 38.8 0.6 160 chr2L 15000854 intergenic not near genes chr2L 15000934 intergenic not near genes chr2L 15001014 intergenic not near genes chr2L_22_15000001 chr2L_15000001 D9 413 chr2L 15044702 15044728 chr2L 15044802 15044829 7 101 3.0 0.0 1.5 2.8 127 chr2L 15044702 intergenic ck - chr2L 15044766 intergenic ck - chr2L 15044829 intergenic ck - chr2L_7_15040001 chr2L_15040001 D9 414 chr2L 15072310 15072319 chr2L 15072427 15072436 6 117 6.0 12.0 9.0 0.6 126 chr2L 15072310 intron vas + chr2L 15072373 exon vas + chr2L 15072436 exon vas + chr2L_6_15070001 chr2L_15070001 D9 415 chr2L 15077870 15078092 chr2L 15077983 15078205 16 113 2.5 4.0 3.2 3.8 335 chr2L 15077870 intron CG15270 + chr2L 15078038 intron CG15270 + chr2L 15078205 intron CG15270 + chr2L_16_15075001 chr2L_15075001 D9 416 chr2L 15082635 15082686 chr2L 15082754 15082805 7 119 2.0 3.0 2.5 2.0 170 chr2L 15082635 intron CG15270 + chr2L 15082720 intron CG15270 + chr2L 15082805 intron CG15270 + chr2L_7_15080001 chr2L_15080001 D9 417 chr2L 15098514 15098540 chr2L 15098619 15098645 14 105 7.0 4.5 5.8 2.1 131 chr2L 15098514 intergenic not near genes chr2L 15098580 intergenic not near genes chr2L 15098645 intergenic not near genes chr2L_14_15095001 chr2L_15095001 D9 418 chr2L 15122767 15122807 chr2L 15122872 15122912 7 105 2.5 4.5 3.5 1.6 145 chr2L 15122767 intergenic not near genes chr2L 15122840 intergenic not near genes chr2L 15122912 intergenic not near genes chr2L_7_15120001 chr2L_15120001 D9 419 chr2L 15156583 15156634 chr2L 15156686 15156739 28 105 4.5 8.5 6.5 3.7 156 chr2L 15156583 intergenic not near genes chr2L 15156661 intergenic not near genes chr2L 15156739 intergenic not near genes chr2L_28_15155001 chr2L_15155001 D9 420 chr2L 15159518 15159524 chr2L 15159628 15159636 7 112 1.5 10.5 6.0 1.0 118 chr2L 15159518 3` UTR CR44771 - chr2L 15159577 3` UTR CR44771 - chr2L 15159636 3` UTR CR44771 - chr2L_7_15155001 chr2L_15155001 D9 421 chr2L 15219656 15219694 chr2L 15219758 15219794 15 102 17.0 12.5 14.8 0.9 138 chr2L 15219656 intergenic not near genes chr2L 15219725 intergenic not near genes chr2L 15219794 intergenic not near genes chr2L_15_15215001 chr2L_15215001 D9 422 chr2L 15226345 15226394 chr2L 15226446 15226495 19 101 6.5 4.5 5.5 2.9 150 chr2L 15226345 intergenic not near genes chr2L 15226420 intergenic not near genes chr2L 15226495 intergenic not near genes chr2L_19_15225001 chr2L_15225001 D9 423 chr2L 15233884 15233954 chr2L 15234026 15234073 13 122 0.0 10.5 5.2 2.1 189 chr2L 15233884 intron ZnT35C - chr2L 15233978 intron ZnT35C - chr2L 15234073 intron ZnT35C - chr2L_13_15230001 chr2L_15230001 D9 424 chr2L 15243053 15243056 chr2L 15243192 15243195 4 139 6.0 23.0 14.5 0.3 142 chr2L 15243053 intron ZnT35C - chr2L 15243124 intron ZnT35C - chr2L 15243195 intron ZnT35C - chr2L_4_15240001 chr2L_15240001 D9 425 chr2L 15243057 15243064 chr2L 15243187 15243203 5 137 6.0 19.5 12.8 0.4 146 chr2L 15243057 intron ZnT35C - chr2L 15243130 intron ZnT35C - chr2L 15243203 intron ZnT35C - chr2L_5_15240001 chr2L_15240001 D9 426 chr2L 15343511 15343535 chr2L 15343621 15343645 9 110 9.5 0.0 4.8 1.6 134 chr2L 15343511 intergenic not near genes chr2L 15343578 intergenic not near genes chr2L 15343645 intergenic not near genes chr2L_9_15340001 chr2L_15340001 D9 427 chr2L 15394147 15394169 chr2L 15394262 15394284 6 115 12.5 0.0 6.2 0.8 137 chr2L 15394147 intergenic not near genes chr2L 15394216 intergenic not near genes chr2L 15394284 intergenic not near genes chr2L_6_15390001 chr2L_15390001 D9 428 chr2L 15405217 15405268 chr2L 15405324 15405375 25 106 10.5 4.5 7.5 2.9 158 chr2L 15405217 intergenic not near genes chr2L 15405296 intergenic not near genes chr2L 15405375 intergenic not near genes chr2L_25_15405001 chr2L_15405001 D9 429 chr2L 15446026 15446070 chr2L 15453520 15453564 blood 13 7494 4.0 3.0 3.5 2.9 7538 chr2L 15446026 intergenic not near genes chr2L 15449795 intergenic not near genes chr2L 15453564 intergenic not near genes chr2L_13_15445001 chr2L_15445001 D9 430 chr2L 15458252 15458278 chr2L 15458365 15458391 5 113 3.5 5.0 4.2 1.0 139 chr2L 15458252 intergenic not near genes chr2L 15458322 intergenic not near genes chr2L 15458391 intergenic not near genes chr2L_5_15455001 chr2L_15455001 D9 431 chr2L 15499886 15499945 chr2L 15499999 15500057 9 112 2.5 6.0 4.2 1.7 171 chr2L 15499886 intron lace + chr2L 15499972 intron lace + chr2L 15500057 intron lace + chr2L_9_15495001 chr2L_15495001 D9 432 chr2L 15510911 15510964 chr2L 15511029 15511081 20 118 6.5 2.5 4.5 3.6 170 chr2L 15510911 intergenic not near genes chr2L 15510996 intergenic not near genes chr2L 15511081 intergenic not near genes chr2L_20_15510001 chr2L_15510001 D9 433 chr2L 15514301 15514331 chr2L 15514410 15514440 12 109 5.5 6.0 5.8 1.8 139 chr2L 15514301 intergenic not near genes chr2L 15514370 intergenic not near genes chr2L 15514440 intergenic not near genes chr2L_12_15510001 chr2L_15510001 D9 434 chr2L 15586387 15586439 chr2L 15593463 15593516 297 14 7077 1.5 6.0 3.8 2.9 7129 chr2L 15586387 intergenic not near genes chr2L 15589952 intergenic not near genes chr2L 15593516 intergenic not near genes chr2L_14_15585001 chr2L_15585001 D9 435 chr2L 15598774 15598790 chr2L 15598872 15598894 4 102 3.0 0.5 1.8 1.4 120 chr2L 15598774 intergenic not near genes chr2L 15598834 intergenic not near genes chr2L 15598894 intergenic not near genes chr2L_4_15595001 chr2L_15595001 D9 436 chr2L 15602838 15602884 chr2L 15603293 15603339 13 455 5.0 6.0 5.5 2.0 501 chr2L 15602838 intergenic not near genes chr2L 15603088 intergenic not near genes chr2L 15603339 intergenic not near genes chr2L_13_15600001 chr2L_15600001 D9 437 chr2L 15636651 15636693 chr2L 15636752 15636794 7 101 2.5 3.0 2.8 1.8 143 chr2L 15636651 intergenic not near genes chr2L 15636722 intergenic not near genes chr2L 15636794 intergenic not near genes chr2L_7_15635001 chr2L_15635001 D9 438 chr2L 15773547 15773581 chr2L 15773653 15773687 INE-1 13 106 1.5 3.0 2.2 4.1 140 chr2L 15773547 intergenic CG31826 - chr2L 15773617 intergenic not near genes chr2L 15773687 intergenic not near genes chr2L_13_15770001 chr2L_15770001 D9 439 chr2L 15776384 15776415 chr2L 15776504 15776533 8 120 3.0 7.0 5.0 1.3 149 chr2L 15776384 intergenic CG43760 - chr2L 15776458 3` UTR CG43760 - chr2L 15776533 exon CG43760 - chr2L_8_15775001 chr2L_15775001 D9 440 chr2L 15863176 15863225 chr2L 15863428 15863476 6 252 3.5 4.0 3.8 1.2 300 chr2L 15863176 intergenic CR42791 + chr2L 15863326 5` UTR CR42791 + chr2L 15863476 5` UTR CR42791 + chr2L_6_15860001 chr2L_15860001 D9 441 chr2L 15915630 15915683 chr2L 15915733 15915786 25 102 9.0 9.0 9.0 2.5 156 chr2L 15915630 intron beat-Ib - chr2L 15915708 intron beat-Ib - chr2L 15915786 intron beat-Ib - chr2L_25_15915001 chr2L_15915001 D9 442 chr2L 15935168 15935221 chr2L 15935282 15935336 7 115 2.0 1.0 1.5 2.8 168 chr2L 15935168 intron beat-Ib - chr2L 15935252 intron beat-Ib - chr2L 15935336 intron beat-Ib - chr2L_7_15935001 chr2L_15935001 D9 443 chr2L 15955998 15956044 chr2L 15957490 15957536 hobo 14 1491 9.5 4.0 6.8 1.8 1538 chr2L 15955998 intron beat-Ib - chr2L 15956767 intron beat-Ib - chr2L 15957536 intron beat-Ib - chr2L_14_15955001 chr2L_15955001 D9 444 chr2L 15996556 15996604 chr2L 15996703 15996751 11 147 3.0 1.0 2.0 3.7 195 chr2L 15996556 intergenic not near genes chr2L 15996654 intergenic not near genes chr2L 15996751 intergenic not near genes chr2L_11_15995001 chr2L_15995001 D9 445 chr2L 16008671 16008711 chr2L 16008774 16008814 5 103 3.5 3.5 3.5 1.1 143 chr2L 16008671 intron beat-Ic + chr2L 16008742 intron beat-Ic + chr2L 16008814 intron beat-Ic + chr2L_5_16005001 chr2L_16005001 D9 446 chr2L 16058109 16058150 chr2L 16058275 16058316 19 166 4.0 7.0 5.5 2.9 207 chr2L 16058109 intron beat-Ia + chr2L 16058212 intron beat-Ia + chr2L 16058316 intron beat-Ia + chr2L_19_16055001 chr2L_16055001 D9 447 chr2L 8578452 8578452 chr2L 16071771 16071771 4 7493319 29.5 40.0 34.8 0.1 7493319 chr2L 8578452 intron Sema-1a + chr2L 12325112 intergenic not near genes chr2L 16071771 intron beat-Ia + chr2L_4_12325001 chr2L_12325001 D9 448 chr2L 10522357 10522358 chr2L 16071771 16071771 4 5549413 21.5 40.0 30.8 0.1 5549414 chr2L 10522357 intergenic not near genes chr2L 13297064 intron CG31729 + chr2L 16071771 intron beat-Ia + chr2L_4_13295001 chr2L_13295001 D9 449 chr2L 16071771 16071771 chr2L 16217660 16217661 copia 72 145889 38.0 24.0 31.0 2.2 145890 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217661 intergenic not near genes chr2L_72_16140001 chr2L_16140001 D9 450 chr2L 16141148 16141192 chr2L 16146380 16146423 copia 9 5232 3.0 6.0 4.5 1.6 5275 chr2L 16141148 intergenic not near genes chr2L 16143786 intergenic not near genes chr2L 16146423 intergenic not near genes chr2L_9_16140001 chr2L_16140001 D9 451 chr2L 16153710 16153745 chr2L 16160789 16160824 297 22 7079 12.0 5.5 8.8 2.2 7114 chr2L 16153710 intergenic not near genes chr2L 16157267 intergenic not near genes chr2L 16160824 intergenic not near genes chr2L_22_16155001 chr2L_16155001 D9 452 chr2L 16170433 16170457 chr2L 16170535 16170563 13 104 32.0 36.5 34.2 0.4 130 chr2L 16170433 intron Ca-alpha1D + chr2L 16170498 intron Ca-alpha1D + chr2L 16170563 intron Ca-alpha1D + chr2L_13_16170001 chr2L_16170001 D9 453 chr2L 16171750 16171796 chr2L 16171869 16171915 14 119 2.5 10.5 6.5 1.9 165 chr2L 16171750 intron Ca-alpha1D + chr2L 16171832 intron Ca-alpha1D + chr2L 16171915 intron Ca-alpha1D + chr2L_14_16170001 chr2L_16170001 D9 454 chr2L 9084336 9084340 chr2L 16217660 16217660 47 7133321 30.5 24.0 27.2 1.7 7133324 chr2L 9084336 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_47_12650001 chr2L_12650001 D9 455 chr2L 16071770 16071771 chr2L 16217660 16217660 copia 49 145889 38.0 24.0 31.0 1.5 145890 chr2L 16071770 intron beat-Ia + chr2L 16144715 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_49_16140001 chr2L_16140001 D9 456 chr2L 16224924 16224939 chr2L 16225077 16225092 5 153 24.5 13.5 19.0 0.2 168 chr2L 16224924 intergenic not near genes chr2L 16225008 intergenic not near genes chr2L 16225092 intergenic not near genes chr2L_5_16225001 chr2L_16225001 D9 457 chr2L 16254870 16254917 chr2L 16255154 16255201 12 283 3.5 4.5 4.0 2.4 331 chr2L 16254870 intron PRL-1 - chr2L 16255036 intron PRL-1 - chr2L 16255201 intron PRL-1 - chr2L_12_16255001 chr2L_16255001 D9 458 chr2L 16280234 16280284 chr2L 16281430 16281480 1360 34 1195 8.5 12.0 10.2 3.0 1246 chr2L 16280234 intron crp - chr2L 16280857 intron crp - chr2L 16281480 intron crp - chr2L_34_16280001 chr2L_16280001 D9 459 chr2L 16372027 16372073 chr2L 16373690 16373736 4 1663 9.5 21.5 15.5 0.2 1709 chr2L 16372027 intergenic not near genes chr2L 16372882 intergenic not near genes chr2L 16373736 intergenic not near genes chr2L_4_16370001 chr2L_16370001 D9 460 chr2L 16391777 16391832 chr2L 16391878 16391933 14 101 1.5 0.0 0.8 7.8 156 chr2L 16391777 intergenic not near genes chr2L 16391855 intergenic not near genes chr2L 16391933 intergenic not near genes chr2L_14_16390001 chr2L_16390001 D9 461 chr2L 16434089 16434131 chr2L 16434194 16434235 10 106 3.5 5.0 4.2 1.9 146 chr2L 16434089 intron CG5888 - chr2L 16434162 intron CG5888 - chr2L 16434235 intron CG5888 - chr2L_10_16430001 chr2L_16430001 D9 462 chr2L 16480579 16480634 chr2L 16480692 16480747 31 112 5.5 4.0 4.8 5.3 168 chr2L 16480579 intron dac - chr2L 16480663 intron dac - chr2L 16480747 intron dac - chr2L_31_16480001 chr2L_16480001 D9 463 chr2L 16507943 16507963 chr2L 16508056 16508076 4 113 0.0 2.5 1.2 1.8 133 chr2L 16507943 intergenic CG5953 -,Tpr2 + chr2L 16508010 intergenic CG5953 -,Tpr2 + chr2L 16508076 intergenic CG5953 -,Tpr2 + chr2L_4_16505001 chr2L_16505001 D9 464 chr2L 16511965 16511991 chr2L 16519117 16519143 HMS-Beagle 5 7152 3.5 1.5 2.5 1.4 7178 chr2L 16511965 intron CG5953 - chr2L 16515554 intron CG5953 - chr2L 16519143 intron CG5953 - chr2L_5_16515001 chr2L_16515001 D9 465 chr2L 16535225 16535280 chr2L 16535370 16535425 13 145 4.0 5.0 4.5 2.4 200 chr2L 16535225 3` UTR CR45355 - chr2L 16535325 intergenic CR45355 - chr2L 16535425 intergenic CR45355 - chr2L_13_16535001 chr2L_16535001 D9 466 chr2L 16573218 16573262 chr2L 16573326 16573370 47 107 21.5 18.0 19.8 2.3 152 chr2L 16573218 intron CG42389 + chr2L 16573294 intron CG42389 + chr2L 16573370 intron CG42389 + chr2L_47_16570001 chr2L_16570001 D9 467 chr2L 16583073 16583108 chr2L 16583186 16583221 7 113 2.0 2.5 2.2 2.2 148 chr2L 16583073 intron CG42389 + chr2L 16583147 intron CG42389 + chr2L 16583221 intron CG42389 + chr2L_7_16580001 chr2L_16580001 D9 468 chr2L 16583530 16583578 chr2L 16583689 16583735 13 159 3.5 3.5 3.5 2.9 205 chr2L 16583530 intron CG42389 + chr2L 16583632 intron CG42389 + chr2L 16583735 intron CG42389 + chr2L_13_16580001 chr2L_16580001 D9 469 chr2L 16693895 16693936 chr2L 16694001 16694042 9 106 15.0 14.5 14.8 0.6 147 chr2L 16693895 intron grp + chr2L 16693968 intron grp + chr2L 16694042 intron grp + chr2L_9_16690001 chr2L_16690001 D9 470 chr2L 16696867 16696904 chr2L 16697206 16697246 6 341 8.5 4.5 6.5 0.8 379 chr2L 16696867 intron grp + chr2L 16697056 intron grp + chr2L 16697246 intron grp + chr2L_6_16695001 chr2L_16695001 D9 471 chr2L 16710697 16710751 chr2L 16710806 16710818 12 101 20.5 27.0 23.8 0.5 121 chr2L 16710697 intron CG31808 - chr2L 16710758 intron CG31808 - chr2L 16710818 intron CG31808 - chr2L_12_16710001 chr2L_16710001 D9 472 chr2L 16716923 16716982 chr2L 16717065 16717124 16 141 6.0 7.5 6.8 2.1 201 chr2L 16716923 intron Cyt-c-d + chr2L 16717024 intron Cyt-c-d + chr2L 16717124 intron Cyt-c-d + chr2L_16_16715001 chr2L_16715001 D9 473 chr2L 16764949 16764985 chr2L 16765054 16765087 7 105 4.5 0.5 2.5 2.0 138 chr2L 16764949 intergenic not near genes chr2L 16765018 intergenic not near genes chr2L 16765087 intergenic not near genes chr2L_7_16765001 chr2L_16765001 D9 474 chr2L 16867683 16867733 chr2L 16867855 16867907 20 173 4.0 7.0 5.5 3.1 224 chr2L 16867683 intergenic not near genes chr2L 16867795 intergenic not near genes chr2L 16867907 intergenic not near genes chr2L_20_16865001 chr2L_16865001 D9 475 chr2L 16952660 16952700 chr2L 16952794 16952834 18 133 12.0 6.0 9.0 1.8 174 chr2L 16952660 intergenic not near genes chr2L 16952747 intergenic not near genes chr2L 16952834 intergenic not near genes chr2L_18_16950001 chr2L_16950001 D9 476 chr2L 16958091 16958118 chr2L 16962904 16962931 Doc 8 4813 0.5 2.5 1.5 3.2 4840 chr2L 16958091 intergenic not near genes chr2L 16960511 intergenic not near genes chr2L 16962931 intergenic not near genes chr2L_8_16960001 chr2L_16960001 D9 477 chr2L 17032491 17032523 chr2L 17032601 17032633 9 110 2.0 4.5 3.2 2.1 142 chr2L 17032491 intergenic not near genes chr2L 17032562 intergenic not near genes chr2L 17032633 intergenic not near genes chr2L_9_17030001 chr2L_17030001 D9 478 chr2L 17050013 17050050 chr2L 17050110 17050122 30 109 9.0 9.0 9.0 3.0 109 chr2L 17050013 intergenic not near genes chr2L 17050068 intergenic not near genes chr2L 17050122 intergenic not near genes chr2L_30_17050001 chr2L_17050001 D9 479 chr2L 17050424 17050470 chr2L 17050526 17050570 10 102 1.0 6.5 3.8 2.1 146 chr2L 17050424 intergenic not near genes chr2L 17050497 intergenic not near genes chr2L 17050570 intergenic not near genes chr2L_10_17050001 chr2L_17050001 D9 480 chr2L 17052392 17052443 chr2L 17052529 17052580 11 137 1.5 4.0 2.8 2.9 188 chr2L 17052392 intergenic not near genes chr2L 17052486 intergenic not near genes chr2L 17052580 intergenic not near genes chr2L_11_17050001 chr2L_17050001 D9 481 chr2L 17062735 17062760 chr2L 17062842 17062867 11 107 8.0 2.5 5.2 1.8 132 chr2L 17062735 intergenic not near genes chr2L 17062801 intergenic not near genes chr2L 17062867 intergenic not near genes chr2L_11_17060001 chr2L_17060001 D9 482 chr2L 17070176 17070217 chr2L 17070297 17070338 10 121 3.5 4.0 3.8 2.1 162 chr2L 17070176 intergenic not near genes chr2L 17070257 intergenic not near genes chr2L 17070338 intergenic not near genes chr2L_10_17070001 chr2L_17070001 D9 483 chr2L 17084910 17084941 chr2L 17085081 17085112 8 170 8.0 3.0 5.5 1.2 202 chr2L 17084910 intergenic not near genes chr2L 17085011 intergenic not near genes chr2L 17085112 intergenic not near genes chr2L_8_17085001 chr2L_17085001 D9 484 chr2L 17087356 17087405 chr2L 17087499 17087548 11 143 3.0 3.0 3.0 2.8 192 chr2L 17087356 intergenic CG12620 + chr2L 17087452 intergenic CG12620 + chr2L 17087548 intergenic CG12620 + chr2L_11_17085001 chr2L_17085001 D9 485 chr2L 17101886 17101916 chr2L 17101987 17102018 12 101 8.0 7.0 7.5 1.4 132 chr2L 17101886 intergenic not near genes chr2L 17101952 intergenic not near genes chr2L 17102018 intergenic not near genes chr2L_12_17100001 chr2L_17100001 D9 486 chr2L 17102984 17103035 chr2L 17103095 17103148 15 112 3.5 5.5 4.5 2.7 164 chr2L 17102984 intergenic not near genes chr2L 17103066 intergenic not near genes chr2L 17103148 intergenic not near genes chr2L_15_17100001 chr2L_17100001 D9 487 chr2L 17167540 17167591 chr2L 17167806 17167857 pogo 14 266 2.5 5.0 3.8 2.9 317 chr2L 17167540 intron,intron CG34106 +,beat-IIIa + chr2L 17167698 intron,intron CG34106 +,beat-IIIa + chr2L 17167857 intron,intron CG34106 +,beat-IIIa + chr2L_14_17165001 chr2L_17165001 D9 488 chr2L 17184252 17184304 chr2L 17184428 17184480 21 175 6.5 4.5 5.5 3.2 228 chr2L 17184252 intergenic not near genes chr2L 17184366 intergenic not near genes chr2L 17184480 intergenic not near genes chr2L_21_17180001 chr2L_17180001 D9 489 chr2L 17199144 17199164 chr2L 17200634 17200656 hobo 4 1492 4.5 2.0 3.2 1.0 1512 chr2L 17199144 intron beat-IIIc - chr2L 17199900 intron beat-IIIc - chr2L 17200656 intron beat-IIIc - chr2L_4_17195001 chr2L_17195001 D9 490 chr2L 17238841 17239063 chr2L 17239028 17239172 28 153 0.0 0.0 0.0 28.0 331 chr2L 17238841 intron beat-IIIc - chr2L 17239006 intron beat-IIIc - chr2L 17239172 intron beat-IIIc - chr2L_28_17235001 chr2L_17235001 D9 491 chr2L 17273171 17273218 chr2L 17277979 17278025 F-element 23 4808 6.0 6.5 6.2 3.2 4854 chr2L 17273171 intergenic not near genes chr2L 17275598 intergenic not near genes chr2L 17278025 intergenic not near genes chr2L_23_17275001 chr2L_17275001 D9 492 chr2L 17303414 17303470 chr2L 17303617 17303673 25 203 4.5 7.0 5.8 3.7 259 chr2L 17303414 intergenic not near genes chr2L 17303544 intergenic not near genes chr2L 17303673 intergenic not near genes chr2L_25_17300001 chr2L_17300001 D9 493 chr2L 17322986 17323025 chr2L 17323093 17323132 4 107 1.5 3.0 2.2 1.2 146 chr2L 17322986 intergenic not near genes chr2L 17323059 intergenic not near genes chr2L 17323132 intergenic not near genes chr2L_4_17320001 chr2L_17320001 D9 494 chr2L 17351926 17351956 chr2L 17352048 17352083 13 126 7.0 5.0 6.0 1.9 157 chr2L 17351926 intergenic not near genes chr2L 17352004 intergenic not near genes chr2L 17352083 intergenic not near genes chr2L_13_17350001 chr2L_17350001 D9 495 chr2L 17405354 17405391 chr2L 17405494 17405531 12 140 19.0 32.0 25.5 0.5 177 chr2L 17405354 intron CLIP-190 + chr2L 17405442 intron CLIP-190 + chr2L 17405531 exon CLIP-190 + chr2L_12_17405001 chr2L_17405001 D9 496 chr2L 17425748 17425789 chr2L 17425900 17425941 4 152 1.5 4.0 2.8 1.1 193 chr2L 17425748 intron Dif - chr2L 17425844 intron Dif - chr2L 17425941 intron Dif - chr2L_4_17425001 chr2L_17425001 D9 497 chr2L 17511611 17511660 chr2L 17511778 17511827 10 167 3.5 4.0 3.8 2.1 216 chr2L 17511611 intron Dhc36C + chr2L 17511719 intron Dhc36C + chr2L 17511827 exon Dhc36C + chr2L_10_17510001 chr2L_17510001 D9 498 chr2L 17607460 17607472 chr2L 17607583 17607595 6 123 10.0 0.0 5.0 1.0 135 chr2L 17607460 intergenic CR44412 - chr2L 17607528 intergenic CR44412 - chr2L 17607595 intergenic CR44412 - chr2L_6_17605001 chr2L_17605001 D9 499 chr2L 17687492 17687523 chr2L 17692262 17692293 F-element 13 4770 4.0 4.0 4.0 2.6 4801 chr2L 17687492 intron CadN - chr2L 17689892 intron CadN - chr2L 17692293 intron CadN - chr2L_13_17685001 chr2L_17685001 D9 500 chr2L 17723769 17723800 chr2L 17723887 17723918 7 118 2.5 4.5 3.5 1.6 149 chr2L 17723769 intron CadN - chr2L 17723844 intron CadN - chr2L 17723918 intron CadN - chr2L_7_17720001 chr2L_17720001 D9 501 chr2L 17727854 17727872 chr2L 17729345 17729364 hobo 6 1492 4.5 8.0 6.2 0.8 1510 chr2L 17727854 intron CadN - chr2L 17728609 intron CadN - chr2L 17729364 intron CadN - chr2L_6_17725001 chr2L_17725001 D9 502 chr2L 17784623 17784665 chr2L 17784746 17784788 12 123 5.0 4.0 4.5 2.2 165 chr2L 17784623 intergenic not near genes chr2L 17784706 intergenic not near genes chr2L 17784788 intergenic not near genes chr2L_12_17780001 chr2L_17780001 D9 503 chr2L 17819901 17819951 chr2L 17825129 17825179 copia 8 5228 5.0 5.0 5.0 1.3 5278 chr2L 17819901 intron CadN2 - chr2L 17822540 intron CadN2 - chr2L 17825179 intron CadN2 - chr2L_8_17820001 chr2L_17820001 D9 504 chr2L 17880574 17880620 chr2L 17880711 17880757 17 137 2.5 7.5 5.0 2.8 183 chr2L 17880574 intergenic not near genes chr2L 17880666 intergenic not near genes chr2L 17880757 intergenic not near genes chr2L_17_17880001 chr2L_17880001 D9 505 chr2L 17911940 17911986 chr2L 17914142 17914197 pogo 15 2210 6.0 5.0 5.5 2.3 2257 chr2L 17911940 intergenic not near genes chr2L 17913068 intergenic not near genes chr2L 17914197 intergenic CG43271 - chr2L_15_17910001 chr2L_17910001 D9 506 chr2L 17943873 17943919 chr2L 17944001 17944047 8 128 3.0 4.5 3.8 1.7 174 chr2L 17943873 intergenic not near genes chr2L 17943960 intergenic not near genes chr2L 17944047 intergenic not near genes chr2L_8_17940001 chr2L_17940001 D9 507 chr2L 17951931 17951971 chr2L 17953423 17953463 hobo 11 1492 5.0 6.0 5.5 1.7 1532 chr2L 17951931 intergenic CR44398 -,CR44397 - chr2L 17952697 intergenic not near genes chr2L 17953463 intergenic not near genes chr2L_11_17950001 chr2L_17950001 D9 508 chr2L 17989972 17990024 chr2L 17990073 17990125 19 101 8.0 9.5 8.8 1.9 153 chr2L 17989972 intergenic Prosbeta5R2 + chr2L 17990048 intergenic Prosbeta5R2 + chr2L 17990125 intergenic Prosbeta5R2 + chr2L_19_17990001 chr2L_17990001 D9 509 chr2L 17986768 17986808 chr2L 17991474 17991511 11 4704 38.5 24.5 31.5 0.3 4743 chr2L 17986768 exon CG5681 + chr2L 17989140 intergenic not near genes chr2L 17991511 3` UTR Prosbeta5R2 + chr2L_11_17985001 chr2L_17985001 D9 510 chr2L 18026963 18027015 chr2L 18027328 18027378 12 365 2.5 7.0 4.8 2.1 415 chr2L 18026963 5` UTR rdo + chr2L 18027170 intron rdo + chr2L 18027378 intron rdo + chr2L_12_18025001 chr2L_18025001 D9 511 chr2L 18040728 18040757 chr2L 18040839 18040869 14 114 0.0 15.0 7.5 1.6 141 chr2L 18040728 intron rdo + chr2L 18040798 intron rdo + chr2L 18040869 intron rdo + chr2L_14_18040001 chr2L_18040001 D9 512 chr2L 18041406 18041455 chr2L 18041698 18041749 13 294 7.5 2.0 4.8 2.2 343 chr2L 18041406 intron rdo + chr2L 18041578 intron rdo + chr2L 18041749 intron rdo + chr2L_13_18040001 chr2L_18040001 D9 513 chr2L 18047008 18047060 chr2L 18047115 18047167 32 106 9.0 7.5 8.2 3.5 159 chr2L 18047008 intron rdo + chr2L 18047088 intron rdo + chr2L 18047167 intron rdo + chr2L_32_18045001 chr2L_18045001 D9 514 chr2L 18051866 18051905 chr2L 18061038 18061077 roo 15 9172 4.0 11.5 7.8 1.7 9211 chr2L 18051866 intron rdo + chr2L 18056472 intron rdo + chr2L 18061077 intron rdo + chr2L_15_18055001 chr2L_18055001 D9 515 chr2L 18066338 18066388 chr2L 18066442 18066492 13 104 7.5 2.0 4.8 2.2 154 chr2L 18066338 intron rdo + chr2L 18066415 intron rdo + chr2L 18066492 intron rdo + chr2L_13_18065001 chr2L_18065001 D9 516 chr2L 18106008 18106045 chr2L 18106155 18106192 10 146 5.5 4.0 4.8 1.7 184 chr2L 18106008 intergenic not near genes chr2L 18106100 intergenic not near genes chr2L 18106192 intergenic not near genes chr2L_10_18105001 chr2L_18105001 D9 517 chr2L 18110060 18110104 chr2L 18110185 18110229 16 125 3.0 1.0 2.0 5.3 169 chr2L 18110060 intergenic not near genes chr2L 18110144 intergenic not near genes chr2L 18110229 intergenic not near genes chr2L_16_18110001 chr2L_18110001 D9 518 chr2L 18154290 18154349 chr2L 18154402 18154461 29 112 6.5 4.0 5.2 4.7 171 chr2L 18154290 exon CG17681 + chr2L 18154376 exon CG17681 + chr2L 18154461 3` UTR CG17681 + chr2L_29_18150001 chr2L_18150001 D9 519 chr2L 18185009 18185019 chr2L 18185149 18185159 4 140 3.5 2.5 3.0 1.0 150 chr2L 18185009 intron CG42750 - chr2L 18185084 intron CG42750 - chr2L 18185159 intron,3` UTR CG42750 -,CR44900 - chr2L_4_18185001 chr2L_18185001 D9 520 chr2L 18257100 18257154 chr2L 18257205 18257257 15 105 2.5 1.0 1.8 5.4 157 chr2L 18257100 intron,5` UTR CG42750 -,CR43408 + chr2L 18257178 intron CG42750 - chr2L 18257257 intron CG42750 - chr2L_15_18255001 chr2L_18255001 D9 521 chr2L 18298923 18298930 chr2L 18299012 18299028 4 96 17.5 10.5 14.0 0.3 105 chr2L 18298923 intergenic not near genes chr2L 18298976 intergenic not near genes chr2L 18299028 intergenic not near genes chr2L_4_18295001 chr2L_18295001 D9 522 chr2L 18298931 18298963 chr2L 18299008 18299023 15 88 8.0 7.5 7.8 1.7 92 chr2L 18298931 intergenic not near genes chr2L 18298977 intergenic not near genes chr2L 18299023 intergenic not near genes chr2L_15_18295001 chr2L_18295001 D9 523 chr2L 18309959 18309972 chr2L 18310076 18310089 4 117 1.0 16.0 8.5 0.4 130 chr2L 18309959 5` UTR CR44694 + chr2L 18310024 intergenic CR44694 +,CR44695 + chr2L 18310089 intergenic CR44695 +,CR44694 + chr2L_4_18310001 chr2L_18310001 D9 524 chr2L 18364246 18364292 chr2L 18364371 18364417 8 125 2.5 5.0 3.8 1.7 171 chr2L 18364246 intron Fas3 + chr2L 18364332 intron Fas3 + chr2L 18364417 intron Fas3 + chr2L_8_18360001 chr2L_18360001 D9 525 chr2L 18370763 18370816 chr2L 18370949 18371002 16 186 6.0 4.5 5.2 2.6 239 chr2L 18370763 intron Fas3 + chr2L 18370882 intron Fas3 + chr2L 18371002 intron Fas3 + chr2L_16_18370001 chr2L_18370001 D9 526 chr2L 18408015 18408052 chr2L 18412824 18412859 Doc 9 4808 4.0 8.0 6.0 1.3 4844 chr2L 18408015 intergenic not near genes chr2L 18410437 intergenic not near genes chr2L 18412859 intergenic not near genes chr2L_9_18410001 chr2L_18410001 D9 527 chr2L 18442079 18442125 chr2L 18442236 18442282 17 157 2.0 4.0 3.0 4.2 203 chr2L 18442079 3` UTR RpS26 - chr2L 18442180 3` UTR RpS26 - chr2L 18442282 3` UTR RpS26 - chr2L_17_18440001 chr2L_18440001 D9 528 chr2L 18629344 18629404 chr2L 18629454 18629514 22 110 5.0 5.0 5.0 3.7 170 chr2L 18629344 intron MESR3 + chr2L 18629429 intron MESR3 + chr2L 18629514 intron MESR3 + chr2L_22_18625001 chr2L_18625001 D9 529 chr2L 18666790 18666835 chr2L 18669944 18669989 6 3154 46.0 35.0 40.5 0.1 3199 chr2L 18666790 intergenic CG43338 - chr2L 18668390 exon CG43338 - chr2L 18669989 intron CG43338 - chr2L_6_18665001 chr2L_18665001 D9 530 chr2L 18670515 18670568 chr2L 18670839 18670891 18 324 7.5 4.5 6.0 2.6 376 chr2L 18670515 intron CG43338 - chr2L 18670703 intron CG43338 - chr2L 18670891 intron CG43338 - chr2L_18_18670001 chr2L_18670001 D9 531 chr2L 18766431 18766447 chr2L 18766577 18766593 5 146 11.0 0.0 5.5 0.8 162 chr2L 18766431 intron ham - chr2L 18766512 intron ham - chr2L 18766593 intron ham - chr2L_5_18765001 chr2L_18765001 D9 532 chr2L 18816004 18816059 chr2L 18816243 18816296 18 239 1.0 2.0 1.5 7.2 292 chr2L 18816004 intergenic not near genes chr2L 18816150 intergenic not near genes chr2L 18816296 intergenic not near genes chr2L_18_18815001 chr2L_18815001 D9 533 chr2L 18872922 18872977 chr2L 18873033 18873086 33 110 8.0 15.0 11.5 2.6 164 chr2L 18872922 intron tup - chr2L 18873004 intron tup - chr2L 18873086 intron tup - chr2L_33_18870001 chr2L_18870001 D9 534 chr2L 18883832 18883883 chr2L 18883939 18883990 24 106 9.5 6.0 7.8 2.7 158 chr2L 18883832 intergenic not near genes chr2L 18883911 intergenic not near genes chr2L 18883990 intergenic not near genes chr2L_24_18880001 chr2L_18880001 D9 535 chr2L 18898371 18898427 chr2L 18898478 18898534 24 106 8.0 0.0 4.0 4.8 163 chr2L 18898371 intergenic not near genes chr2L 18898452 intergenic not near genes chr2L 18898534 intergenic not near genes chr2L_24_18895001 chr2L_18895001 D9 536 chr2L 18904545 18904602 chr2L 18904696 18904750 24 151 1.5 3.0 2.2 7.5 205 chr2L 18904545 intergenic not near genes chr2L 18904648 intergenic not near genes chr2L 18904750 intergenic not near genes chr2L_24_18900001 chr2L_18900001 D9 537 chr2L 18913406 18913460 chr2L 18913517 18913571 42 110 5.5 5.0 5.2 6.8 165 chr2L 18913406 intergenic not near genes chr2L 18913488 intergenic not near genes chr2L 18913571 intergenic not near genes chr2L_42_18910001 chr2L_18910001 D9 538 chr2L 19024096 19024097 chr2L 21768291 21768293 34 2744195 40.0 46.0 43.0 0.8 2744197 chr2L 19024096 3` UTR CR43700 - chr2L 20396194 intron CG10947 - chr2L 21768293 intron CG31612 - chr2L_34_20395001 chr2L_20395001 D9 539 chr2L 19070241 19070295 chr2L 19070359 19070413 29 117 11.0 5.5 8.2 3.2 172 chr2L 19070241 intergenic CG10702 - chr2L 19070327 intergenic CG10702 - chr2L 19070413 intergenic not near genes chr2L_29_19070001 chr2L_19070001 D9 540 chr2L 19101480 19101522 chr2L 19101632 19101665 16 144 58.5 56.5 57.5 0.3 185 chr2L 19101480 intron Lim3 - chr2L 19101572 intron Lim3 - chr2L 19101665 intron Lim3 - chr2L_16_19100001 chr2L_19100001 D9 541 chr2L 19147345 19147389 chr2L 19154405 19154448 297 18 7060 5.5 5.0 5.2 2.9 7103 chr2L 19147345 intron brat + chr2L 19150896 intron brat + chr2L 19154448 intron brat + chr2L_18_19150001 chr2L_19150001 D9 542 chr2L 19214561 19214610 chr2L 19214667 19214716 9 106 4.0 6.0 5.0 1.5 155 chr2L 19214561 intergenic not near genes chr2L 19214638 intergenic not near genes chr2L 19214716 intergenic not near genes chr2L_9_19210001 chr2L_19210001 D9 543 chr2L 19305582 19305632 chr2L 19305713 19305763 10 130 1.0 4.5 2.8 2.6 181 chr2L 19305582 intergenic not near genes chr2L 19305672 intergenic not near genes chr2L 19305763 intergenic not near genes chr2L_10_19305001 chr2L_19305001 D9 544 chr2L 19308931 19308987 chr2L 19309042 19309098 19 111 4.5 3.0 3.8 4.0 167 chr2L 19308931 intergenic not near genes chr2L 19309014 intergenic not near genes chr2L 19309098 intergenic not near genes chr2L_19_19305001 chr2L_19305001 D9 545 chr2L 19309596 19309651 chr2L 19309701 19309756 8 104 4.0 4.0 4.0 1.6 160 chr2L 19309596 intergenic not near genes chr2L 19309676 intergenic not near genes chr2L 19309756 intergenic not near genes chr2L_8_19305001 chr2L_19305001 D9 546 chr2L 19344998 19345037 chr2L 19357229 19357271 blood 10 12234 5.5 5.0 5.2 1.6 12273 chr2L 19344998 intron dnt - chr2L 19351134 intron dnt - chr2L 19357271 intron dnt - chr2L_10_19350001 chr2L_19350001 D9 547 chr2L 19357523 19357568 chr2L 19357638 19357681 24 115 5.0 8.5 6.8 3.1 158 chr2L 19357523 intron dnt - chr2L 19357602 intron dnt - chr2L 19357681 intron dnt - chr2L_24_19355001 chr2L_19355001 D9 548 chr2L 19380485 19380520 chr2L 19380588 19380624 8 104 6.0 3.5 4.8 1.4 139 chr2L 19380485 intergenic CG17350 + chr2L 19380554 intergenic CG17350 + chr2L 19380624 intergenic CG17350 + chr2L_8_19380001 chr2L_19380001 D9 549 chr2L 19383972 19384014 chr2L 19384098 19384140 26 125 6.5 6.0 6.2 3.6 168 chr2L 19383972 exon fon - chr2L 19384056 exon fon - chr2L 19384140 exon fon - chr2L_26_19380001 chr2L_19380001 D9 550 chr2L 19393939 19393994 chr2L 19394078 19394133 8 139 2.5 0.0 1.2 3.6 194 chr2L 19393939 intron CG17544 - chr2L 19394036 intron CG17544 - chr2L 19394133 intron CG17544 - chr2L_8_19390001 chr2L_19390001 D9 551 chr2L 19489640 19489678 chr2L 19490445 19490483 14 806 38.0 12.5 25.2 0.5 843 chr2L 19489640 exon CG10194 - chr2L 19490062 exon CG10194 - chr2L 19490483 5` UTR CG18094 + chr2L_14_19490001 chr2L_19490001 D9 552 chr2L 19557801 19557817 chr2L 19557917 19557934 5 117 4.0 0.0 2.0 1.7 133 chr2L 19557801 intergenic Tep5 + chr2L 19557868 intergenic Tep5 + chr2L 19557934 intergenic Tep5 + chr2L_5_19555001 chr2L_19555001 D9 553 chr2L 19558495 19558539 chr2L 19558624 19558668 9 129 0.0 3.5 1.8 3.2 173 chr2L 19558495 intron Tep5 + chr2L 19558582 intron Tep5 + chr2L 19558668 intron Tep5 + chr2L_9_19555001 chr2L_19555001 D9 554 chr2L 19559979 19560039 chr2L 19560257 19560316 12 277 2.0 1.5 1.8 4.3 337 chr2L 19559979 exon Tep5 + chr2L 19560148 exon Tep5 + chr2L 19560316 intron Tep5 + chr2L_12_19560001 chr2L_19560001 D9 555 chr2L 19560835 19560849 chr2L 19560940 19560954 4 105 6.0 0.0 3.0 1.0 119 chr2L 19560835 intron Tep5 + chr2L 19560894 exon Tep5 + chr2L 19560954 exon Tep5 + chr2L_4_19560001 chr2L_19560001 D9 556 chr2L 19561340 19561348 chr2L 19561505 19561514 4 166 3.0 1.5 2.2 1.2 174 chr2L 19561340 exon Tep5 + chr2L 19561427 exon Tep5 + chr2L 19561514 exon Tep5 + chr2L_4_19560001 chr2L_19560001 D9 557 chr2L 19562503 19562560 chr2L 19562608 19562665 24 105 6.5 5.5 6.0 3.4 162 chr2L 19562503 exon Tep5 + chr2L 19562584 intron Tep5 + chr2L 19562665 exon Tep5 + chr2L_24_19560001 chr2L_19560001 D9 558 chr2L 19620075 19620128 chr2L 19621084 19621142 jockey 16 1014 6.5 5.0 5.8 2.4 1067 chr2L 19620075 intron Lar + chr2L 19620608 intron Lar + chr2L 19621142 intron Lar + chr2L_16_19620001 chr2L_19620001 D9 559 chr2L 19652547 19652577 chr2L 19674008 19674038 opus 5 21461 4.5 1.5 3.0 1.2 21491 chr2L 19652547 intron Lar + chr2L 19663292 intron Lar + chr2L 19674038 intron Lar + chr2L_5_19660001 chr2L_19660001 D9 560 chr2L 19683336 19683375 chr2L 19683815 19683854 9 479 4.5 2.0 3.2 2.1 518 chr2L 19683336 intron Lar + chr2L 19683595 intron Lar + chr2L 19683854 intron Lar + chr2L_9_19680001 chr2L_19680001 D9 561 chr2L 19703518 19703565 chr2L 19712679 19712723 roo 8 9161 2.5 9.5 6.0 1.1 9205 chr2L 19703518 intron Lar + chr2L 19708120 intron Lar + chr2L 19712723 intron Lar + chr2L_8_19705001 chr2L_19705001 D9 562 chr2L 19737334 19737386 chr2L 19740828 19740837 1360 19 3491 4.5 9.0 6.8 2.4 3503 chr2L 19737334 intergenic Nf-YB + chr2L 19739086 intergenic not near genes chr2L 19740837 intergenic not near genes chr2L_19_19735001 chr2L_19735001 D9 563 chr2L 19742333 19742385 chr2L 19742443 19742495 11 110 1.0 0.5 0.8 6.1 162 chr2L 19742333 intergenic CG10631 - chr2L 19742414 intergenic CG10631 - chr2L 19742495 intergenic CG10631 - chr2L_11_19740001 chr2L_19740001 D9 564 chr2L 19762785 19762828 chr2L 19763052 19763095 pogo 8 267 6.0 5.0 5.5 1.2 310 chr2L 19762785 exon fbp - chr2L 19762940 intron fbp - chr2L 19763095 intron fbp - chr2L_8_19760001 chr2L_19760001 D9 565 chr2L 19773147 19773184 chr2L 19773249 19773296 5 110 4.5 2.5 3.5 1.1 149 chr2L 19773147 intergenic not near genes chr2L 19773222 intergenic not near genes chr2L 19773296 intergenic not near genes chr2L_5_19770001 chr2L_19770001 D9 566 chr2L 19776642 19776657 chr2L 19776747 19776762 5 105 1.0 4.0 2.5 1.4 120 chr2L 19776642 3` UTR CdGAPr - chr2L 19776702 3` UTR CdGAPr - chr2L 19776762 3` UTR CdGAPr - chr2L_5_19775001 chr2L_19775001 D9 567 chr2L 19870390 19870444 chr2L 19870903 19870957 18 513 4.0 3.5 3.8 3.8 567 chr2L 19870390 intron sick + chr2L 19870674 intron sick + chr2L 19870957 intron sick + chr2L_18_19870001 chr2L_19870001 D9 568 chr2L 20005850 20005898 chr2L 20010950 20010999 flea 10 5101 3.0 2.0 2.5 2.9 5149 chr2L 20005850 intron CG43861 - chr2L 20008424 intron CG43861 - chr2L 20010999 intron CG43861 - chr2L_10_20005001 chr2L_20005001 D9 569 chr2L 20272090 20272139 chr2L 20282826 20282875 copia 21 10736 7.5 9.5 8.5 2.2 10785 chr2L 20272090 intergenic not near genes chr2L 20277482 intergenic not near genes chr2L 20282875 intergenic not near genes chr2L_21_20275001 chr2L_20275001 D9 570 chr2L 20296487 20296537 chr2L 20296593 20296643 18 106 2.0 4.0 3.0 4.5 156 chr2L 20296487 intergenic CR43414 - chr2L 20296565 intergenic CR43414 - chr2L 20296643 3` UTR CR43414 - chr2L_18_20295001 chr2L_20295001 D9 571 chr2L 20299977 20300020 chr2L 20300090 20300122 13 107 27.5 26.5 27.0 0.5 145 chr2L 20299977 intergenic not near genes chr2L 20300050 intergenic not near genes chr2L 20300122 intergenic not near genes chr2L_13_20300001 chr2L_20300001 D9 572 chr2L 20322610 20322666 chr2L 20322717 20322751 9 104 15.0 16.0 15.5 0.5 141 chr2L 20322610 intron spir + chr2L 20322680 intron spir + chr2L 20322751 intron spir + chr2L_9_20320001 chr2L_20320001 D9 573 chr2L 19479165 19479165 chr2L 20360643 20360646 4 881479 19.5 55.5 37.5 0.1 881481 chr2L 19479165 intergenic not near genes chr2L 19919906 intron,5` UTR sick +,CR43828 + chr2L 20360646 exon RtGEF + chr2L_4_19915001 chr2L_19915001 D9 574 chr2L 20372202 20372245 chr2L 20372468 20372511 pogo 19 266 0.0 5.0 2.5 5.4 309 chr2L 20372202 intergenic Ugt37a1 - chr2L 20372356 intergenic Ugt37a1 - chr2L 20372511 exon Ugt37a1 - chr2L_19_20370001 chr2L_20370001 D9 575 chr2L 20396781 20396797 chr2L 20396882 20396898 4 101 16.5 11.5 14.0 0.3 117 chr2L 20396781 intron CG10947 - chr2L 20396840 intron CG10947 - chr2L 20396898 intron CG10947 - chr2L_4_20395001 chr2L_20395001 D9 576 chr2L 20498663 20498706 chr2L 20498787 20498830 19 124 10.5 12.0 11.2 1.6 167 chr2L 20498663 intergenic not near genes chr2L 20498746 intergenic not near genes chr2L 20498830 intergenic not near genes chr2L_19_20495001 chr2L_20495001 D9 577 chr2L 20532000 20532057 chr2L 20532112 20532169 11 112 13.5 16.5 15.0 0.7 169 chr2L 20532000 intergenic CG44270 + chr2L 20532084 intergenic CG44270 + chr2L 20532169 intergenic CG44270 + chr2L_11_20530001 chr2L_20530001 D9 578 chr2L 20568635 20568686 chr2L 20569050 20569101 X-element 25 415 4.5 4.0 4.2 4.8 466 chr2L 20568635 intron CR45347 + chr2L 20568868 intron CR45347 + chr2L 20569101 intron CR45347 + chr2L_25_20565001 chr2L_20565001 D9 579 chr2L 20576199 20576247 chr2L 20583692 20583741 blood 12 7493 1.5 4.0 2.8 3.2 7542 chr2L 20576199 intergenic CR45347 + chr2L 20579970 intergenic not near genes chr2L 20583741 3` UTR CR44909 - chr2L_12_20575001 chr2L_20575001 D9 580 chr2L 20611207 20611260 chr2L 20611321 20611374 5 114 11.0 13.0 12.0 0.4 167 chr2L 20611207 intron CR44909 - chr2L 20611290 intron CR44909 - chr2L 20611374 intron CR44909 - chr2L_5_20610001 chr2L_20610001 D9 581 chr2L 20623893 20623921 chr2L 20623997 20624025 8 104 15.0 12.5 13.8 0.5 132 chr2L 20623893 intron CR44909 - chr2L 20623959 intron CR44909 - chr2L 20624025 intron CR44909 - chr2L_8_20620001 chr2L_20620001 D9 582 chr2L 20639479 20639529 chr2L 20639780 20639830 INE-1 9 301 9.0 16.5 12.8 0.7 351 chr2L 20639479 intergenic not near genes chr2L 20639654 intergenic CG31680 + chr2L 20639830 intergenic CG31680 + chr2L_9_20635001 chr2L_20635001 D9 583 chr2L 20643319 20643336 chr2L 20643475 20643492 6 157 4.0 6.5 5.2 1.0 173 chr2L 20643319 intergenic phr6-4 -,CG17470 - chr2L 20643406 3` UTR phr6-4 - chr2L 20643492 3` UTR phr6-4 - chr2L_6_20640001 chr2L_20640001 D9 584 chr2L 20668675 20668718 chr2L 20668774 20668819 11 101 10.0 12.0 11.0 0.9 144 chr2L 20668675 intron CG31678 - chr2L 20668747 intron CG31678 - chr2L 20668819 intron CG31678 - chr2L_11_20665001 chr2L_20665001 D9 585 chr2L 20673972 20674013 chr2L 20674483 20674523 13 510 21.0 11.5 16.2 0.8 551 chr2L 20673972 intron CG31678 - chr2L 20674248 intron CG31678 - chr2L 20674523 intron CG31678 - chr2L_13_20670001 chr2L_20670001 D9 586 chr2L 20674806 20674860 chr2L 20674916 20674962 11 104 2.5 0.0 1.2 5.0 156 chr2L 20674806 intron CG31678 - chr2L 20674884 intron CG31678 - chr2L 20674962 intron CG31678 - chr2L_11_20670001 chr2L_20670001 D9 587 chr2L 20695786 20695824 chr2L 20695898 20695936 7 112 14.0 17.5 15.8 0.4 150 chr2L 20695786 intron Hr38 - chr2L 20695861 intron Hr38 - chr2L 20695936 intron Hr38 - chr2L_7_20695001 chr2L_20695001 D9 588 chr2L 20711660 20711716 chr2L 20711775 20711831 14 115 21.5 21.0 21.2 0.6 171 chr2L 20711660 intron,5` UTR Hr38 -,CR44188 + chr2L 20711746 intron,5` UTR Hr38 -,CR44188 + chr2L 20711831 intron,5` UTR Hr38 -,CR44188 + chr2L_14_20710001 chr2L_20710001 D9 589 chr2L 20819089 20819129 chr2L 20819196 20819238 10 109 18.0 18.0 18.0 0.5 149 chr2L 20819089 intergenic not near genes chr2L 20819164 intergenic not near genes chr2L 20819238 intergenic not near genes chr2L_10_20815001 chr2L_20815001 D9 590 chr2L 20821475 20821522 chr2L 20821648 20821700 6 175 36.0 40.5 38.2 0.2 225 chr2L 20821475 intergenic not near genes chr2L 20821588 intergenic not near genes chr2L 20821700 intergenic not near genes chr2L_6_20820001 chr2L_20820001 D9 591 chr2L 20826501 20826539 chr2L 20826604 20826644 6 105 12.5 12.5 12.5 0.4 143 chr2L 20826501 intron CG9331 + chr2L 20826572 intron CG9331 + chr2L 20826644 exon CG9331 + chr2L_6_20825001 chr2L_20825001 D9 592 chr2L 20835784 20835840 chr2L 20836526 20836582 Quasimodo 8 742 9.5 10.5 10.0 0.7 798 chr2L 20835784 5` UTR Oseg5 - chr2L 20836183 intergenic Oseg5 -,Spn38F - chr2L 20836582 intergenic Spn38F - chr2L_8_20835001 chr2L_20835001 D9 593 chr2L 20840002 20840056 chr2L 20840239 20840261 40 236 6.5 6.5 6.5 5.3 259 chr2L 20840002 intergenic not near genes chr2L 20840132 intergenic not near genes chr2L 20840261 intergenic CG31676 + chr2L_40_20840001 chr2L_20840001 D9 594 chr2L 20891515 20891529 chr2L 20896641 20896655 jockey 5 5126 5.0 4.5 4.8 0.9 5140 chr2L 20891515 intron,intron CG43739 -,sky - chr2L 20894085 intron,intron CG43739 -,sky - chr2L 20896655 intron,intron CG43739 -,sky - chr2L_5_20890001 chr2L_20890001 D9 595 chr2L 20901431 20901479 chr2L 20902620 20902668 1360 11 1188 12.0 3.0 7.5 1.3 1237 chr2L 20901431 intron,intron CG43739 -,sky - chr2L 20902050 intron,intron CG43739 -,sky - chr2L 20902668 intron,intron CG43739 -,sky - chr2L_11_20900001 chr2L_20900001 D9 596 chr2L 20911010 20911052 chr2L 20911111 20911153 12 101 19.0 16.5 17.8 0.6 143 chr2L 20911010 intron,intron CG43739 -,sky - chr2L 20911082 intron,intron CG43739 -,sky - chr2L 20911153 intron,intron CG43739 -,sky - chr2L_12_20910001 chr2L_20910001 D9 597 chr2L 20934588 20934627 chr2L 20934808 20934847 5 220 6.0 8.5 7.2 0.6 259 chr2L 20934588 intergenic CG9270 - chr2L 20934718 intergenic not near genes chr2L 20934847 intergenic not near genes chr2L_5_20930001 chr2L_20930001 D9 598 chr2L 20946921 20946962 chr2L 20947033 20947074 17 112 7.5 4.5 6.0 2.4 153 chr2L 20946921 intergenic CR44606 - chr2L 20946998 intergenic CR44606 - chr2L 20947074 intergenic CR44606 - chr2L_17_20945001 chr2L_20945001 D9 599 chr2L 20967057 20967106 chr2L 20967168 20967217 16 111 4.5 3.5 4.0 3.2 160 chr2L 20967057 3` UTR CG42238 - chr2L 20967137 3` UTR CG42238 - chr2L 20967217 3` UTR CG42238 - chr2L_16_20965001 chr2L_20965001 D9 600 chr2L 20976630 20976668 chr2L 20981470 20981508 X-element 8 4840 4.5 8.5 6.5 1.1 4878 chr2L 20976630 intron CG42238 - chr2L 20979069 intron CG42238 - chr2L 20981508 intron CG42238 - chr2L_8_20975001 chr2L_20975001 D9 601 chr2L 20984389 20984422 chr2L 20984700 20984732 4 310 4.5 14.0 9.2 0.4 343 chr2L 20984389 intron CG42238 - chr2L 20984560 intron CG42238 - chr2L 20984732 intron CG42238 - chr2L_4_20980001 chr2L_20980001 D9 602 chr2L 20991017 20991068 chr2L 20991120 20991169 22 103 7.0 8.5 7.8 2.5 152 chr2L 20991017 intron CG42238 - chr2L 20991093 intron CG42238 - chr2L 20991169 intron CG42238 - chr2L_22_20990001 chr2L_20990001 D9 603 chr2L 21020253 21020303 chr2L 21023955 21024005 NOF 27 3702 7.0 11.0 9.0 2.7 3752 chr2L 21020253 intron CG42238 - chr2L 21022129 intron CG42238 - chr2L 21024005 intron CG42238 - chr2L_27_21020001 chr2L_21020001 D9 604 chr2L 21041114 21041167 chr2L 21049400 21049453 Tirant 7 8285 2.0 4.0 3.0 1.8 8339 chr2L 21041114 intron CG42238 - chr2L 21045284 intron CG42238 - chr2L 21049453 intron CG42238 - chr2L_7_21045001 chr2L_21045001 D9 605 chr2L 21074901 21074952 chr2L 21075017 21075068 10 116 3.0 3.5 3.2 2.4 167 chr2L 21074901 intergenic not near genes chr2L 21074984 intergenic tadr + chr2L 21075068 intergenic tadr + chr2L_10_21070001 chr2L_21070001 D9 606 chr2L 21086422 21086455 chr2L 21086562 21086595 24 139 4.5 7.0 5.8 3.5 173 chr2L 21086422 5` UTR CG33509 - chr2L 21086508 intergenic CG33509 -,ppk13 - chr2L 21086595 intergenic CG33509 -,ppk13 - chr2L_24_21085001 chr2L_21085001 D9 607 chr2L 21088894 21088948 chr2L 21089001 21089056 15 108 3.5 4.0 3.8 3.1 162 chr2L 21088894 intergenic ppk13 -,CG9259 + chr2L 21088975 intergenic ppk13 -,CG9259 + chr2L 21089056 intergenic ppk13 -,CG9259 + chr2L_15_21085001 chr2L_21085001 D9 608 chr2L 21158856 21158909 chr2L 21158958 21159011 11 102 14.5 13.0 13.8 0.7 155 chr2L 21158856 intergenic CG9248 +,CG9249 - chr2L 21158934 5` UTR CG9248 + chr2L 21159011 exon CG9248 + chr2L_11_21155001 chr2L_21155001 D9 609 chr2L 21179201 21179231 chr2L 21179304 21179326 9 104 26.0 31.5 28.8 0.3 125 chr2L 21179201 intron,5` UTR bur -,CR44911 + chr2L 21179264 intron,5` UTR bur -,CR44911 + chr2L 21179326 intron,5` UTR bur -,CR44911 + chr2L_9_21175001 chr2L_21175001 D9 610 chr2L 21286584 21286617 chr2L 21286685 21286720 6 102 14.0 9.0 11.5 0.5 136 chr2L 21286584 exon Mio - chr2L 21286652 intron Mio - chr2L 21286720 intron Mio - chr2L_6_21285001 chr2L_21285001 D9 611 chr2L 21347538 21347578 chr2L 21355035 21355074 blood 6 7497 2.5 3.0 2.8 1.6 7536 chr2L 21347538 intron Tsp39D + chr2L 21351306 intron Tsp39D + chr2L 21355074 intron Tsp39D + chr2L_6_21350001 chr2L_21350001 D9 612 chr2L 21355586 21355638 chr2L 21355756 21355808 4 170 1.5 2.5 2.0 1.3 222 chr2L 21355586 exon Tsp39D + chr2L 21355697 intron Tsp39D + chr2L 21355808 intron Tsp39D + chr2L_4_21355001 chr2L_21355001 D9 613 chr2L 21394364 21394399 chr2L 21394466 21394503 9 104 31.0 35.5 33.2 0.3 139 chr2L 21394364 intergenic not near genes chr2L 21394434 intergenic not near genes chr2L 21394503 intergenic not near genes chr2L_9_21390001 chr2L_21390001 D9 614 chr2L 21597026 21597058 chr2L 21604794 21604827 roo 5 7769 2.0 3.5 2.8 1.3 7801 chr2L 21597026 intergenic not near genes chr2L 21600926 intergenic not near genes chr2L 21604827 intergenic not near genes chr2L_5_21600001 chr2L_21600001 D9 615 chr2L 21612537 21612590 chr2L 21612682 21612735 12 144 7.5 7.5 7.5 1.4 198 chr2L 21612537 intergenic not near genes chr2L 21612636 intergenic not near genes chr2L 21612735 intergenic not near genes chr2L_12_21610001 chr2L_21610001 D9 616 chr2L 21691808 21691832 chr2L 21698301 21698327 Burdock 5 6495 4.5 0.5 2.5 1.4 6519 chr2L 21691808 intron CG31619 + chr2L 21695068 intron CG31619 + chr2L 21698327 intron CG31619 + chr2L_5_21695001 chr2L_21695001 D9 617 chr2L 21755468 21755513 chr2L 21755617 21755662 10 149 10.5 6.5 8.5 1.1 194 chr2L 21755468 intron step - chr2L 21755565 intron step - chr2L 21755662 intron step - chr2L_10_21755001 chr2L_21755001 D9 618 chr2L 21757556 21757578 chr2L 21757662 21757684 7 106 6.5 5.0 5.8 1.0 128 chr2L 21757556 intergenic step -,CG1416 + chr2L 21757620 intergenic step -,CG1416 + chr2L 21757684 intergenic step -,CG1416 + chr2L_7_21755001 chr2L_21755001 D9 619 chr2L 21788718 21788766 chr2L 21788821 21788869 4 103 7.0 9.0 8.0 0.4 151 chr2L 21788718 intron CG31612 - chr2L 21788794 intron CG31612 - chr2L 21788869 intron CG31612 - chr2L_4_21785001 chr2L_21785001 D9 620 chr2L 21806209 21806236 chr2L 21806337 21806364 5 128 10.5 5.5 8.0 0.6 155 chr2L 21806209 intergenic not near genes chr2L 21806286 intergenic not near genes chr2L 21806364 intergenic not near genes chr2L_5_21805001 chr2L_21805001 D9 621 chr2L 21808988 21809043 chr2L 21809217 21809266 15 230 13.5 14.0 13.8 1.0 278 chr2L 21808988 intergenic not near genes chr2L 21809127 intergenic not near genes chr2L 21809266 intergenic not near genes chr2L_15_21805001 chr2L_21805001 D9 622 chr2L 21819303 21819360 chr2L 21819416 21819473 33 113 3.0 7.0 5.0 5.5 170 chr2L 21819303 intergenic CR44786 + chr2L 21819388 intergenic CR44786 + chr2L 21819473 intergenic CR44786 + chr2L_33_21815001 chr2L_21815001 D9 623 chr2L 21855476 21855510 chr2L 21855588 21855622 7 112 4.5 4.5 4.5 1.3 146 chr2L 21855476 intron CR44917 + chr2L 21855549 intron CR44917 + chr2L 21855622 intron CR44917 + chr2L_7_21855001 chr2L_21855001 D9 624 chr2L 21859295 21859345 chr2L 21859400 21859450 31 105 21.5 20.5 21.0 1.4 155 chr2L 21859295 intron CR44917 + chr2L 21859372 intron CR44917 + chr2L 21859450 intron CR44917 + chr2L_31_21855001 chr2L_21855001 D9 625 chr2L 21902491 21902500 chr2L 21902591 21902602 INE-1 5 102 0.5 6.5 3.5 1.1 111 chr2L 21902491 intergenic not near genes chr2L 21902546 intergenic CG1421 + chr2L 21902602 intergenic CG1421 + chr2L_5_21900001 chr2L_21900001 D9 626 chr2L 21905045 21905100 chr2L 21905180 21905235 15 135 17.5 14.5 16.0 0.9 190 chr2L 21905045 intergenic not near genes chr2L 21905140 intergenic not near genes chr2L 21905235 intergenic not near genes chr2L_15_21905001 chr2L_21905001 D9 627 chr2L 21905813 21905856 chr2L 21905944 21905986 4 131 6.5 5.5 6.0 0.6 173 chr2L 21905813 intergenic CG1428 + chr2L 21905900 intergenic CG1428 + chr2L 21905986 intergenic CG1428 + chr2L_4_21905001 chr2L_21905001 D9 628 chr2L 21933906 21933924 chr2L 21934003 21934029 15 105 13.5 22.0 17.8 0.8 123 chr2L 21933906 intergenic not near genes chr2L 21933968 intergenic not near genes chr2L 21934029 intergenic not near genes chr2L_15_21930001 chr2L_21930001 D9 629 chr2L 21954217 21954236 chr2L 21954322 21954341 4 105 13.5 18.5 16.0 0.2 124 chr2L 21954217 intergenic not near genes chr2L 21954279 intergenic not near genes chr2L 21954341 intergenic not near genes chr2L_4_21950001 chr2L_21950001 D9 630 chr2L 21953804 21953841 chr2L 21954680 21954717 9 877 40.5 42.0 41.2 0.2 913 chr2L 21953804 intergenic not near genes chr2L 21954260 intergenic not near genes chr2L 21954717 intergenic not near genes chr2L_9_21950001 chr2L_21950001 D9 631 chr2L 21981663 21981707 chr2L 21990853 21990897 roo 13 9190 7.0 13.0 10.0 1.2 9234 chr2L 21981663 exon CG2528 - chr2L 21986280 intron CG2528 - chr2L 21990897 exon CG2528 - chr2L_13_21985001 chr2L_21985001 D9 632 chr2L 21996920 21996957 chr2L 21997026 21997063 5 106 6.0 9.0 7.5 0.6 143 chr2L 21996920 intergenic not near genes chr2L 21996992 intergenic not near genes chr2L 21997063 intergenic not near genes chr2L_5_21995001 chr2L_21995001 D9 633 chr2L 22035956 22036007 chr2L 22036106 22036158 15 150 13.5 14.0 13.8 1.0 202 chr2L 22035956 intergenic not near genes chr2L 22036057 intergenic not near genes chr2L 22036158 intergenic not near genes chr2L_15_22035001 chr2L_22035001 D9 634 chr2L 22047234 22047255 chr2L 22047384 22047405 7 149 4.5 4.5 4.5 1.3 171 chr2L 22047234 intergenic not near genes chr2L 22047320 intergenic not near genes chr2L 22047405 intergenic not near genes chr2L_7_22045001 chr2L_22045001 D9 635 chr2L 22148703 22148733 chr2L 22148809 22148839 8 106 14.0 13.0 13.5 0.6 136 chr2L 22148703 intron CG42748 + chr2L 22148771 intron CG42748 + chr2L 22148839 intron CG42748 + chr2L_8_22145001 chr2L_22145001 D9 636 chr2L 22152814 22152850 chr2L 22152915 22152951 5 101 6.5 6.5 6.5 0.7 137 chr2L 22152814 intron CG42748 + chr2L 22152882 intron CG42748 + chr2L 22152951 intron CG42748 + chr2L_5_22150001 chr2L_22150001 D9 637 chr2L 22178033 22178070 chr2L 22178141 22178177 10 109 11.5 12.0 11.8 0.8 144 chr2L 22178033 intron CG3635 + chr2L 22178105 intron CG3635 + chr2L 22178177 intron CG3635 + chr2L_10_22175001 chr2L_22175001 D9 638 chr2L 22191947 22192055 chr2L 22192051 22192167 4 115 8.5 7.5 8.0 0.4 220 chr2L 22191947 intron Ir40a - chr2L 22192057 intron Ir40a - chr2L 22192167 intron Ir40a - chr2L_4_22190001 chr2L_22190001 D9 639 chr2L 22192367 22192423 chr2L 22192470 22192526 16 102 23.0 25.0 24.0 0.6 159 chr2L 22192367 intron Ir40a - chr2L 22192446 intron Ir40a - chr2L 22192526 intron Ir40a - chr2L_16_22190001 chr2L_22190001 D9 640 chr2L 22215903 22215915 chr2L 22216014 22216026 4 111 2.5 6.0 4.2 0.8 123 chr2L 22215903 intergenic not near genes chr2L 22215964 intergenic not near genes chr2L 22216026 intergenic not near genes chr2L_4_22215001 chr2L_22215001 D9 641 chr2L 22239414 22239458 chr2L 22239519 22239564 10 106 12.5 17.0 14.8 0.6 150 chr2L 22239414 intron CR43765 - chr2L 22239489 3` UTR CR43765 - chr2L 22239564 3` UTR CR43765 - chr2L_10_22235001 chr2L_22235001 D9 642 chr2L 22258601 22258643 chr2L 22260748 22260792 G6 16 2149 2.5 7.0 4.8 2.8 2191 chr2L 22258601 intergenic Tif-IA + chr2L 22259696 intergenic not near genes chr2L 22260792 intergenic not near genes chr2L_16_22255001 chr2L_22255001 D9 643 chr2L 22318828 22318874 chr2L 22318932 22318978 7 104 1.5 1.5 1.5 2.8 150 chr2L 22318828 intron CG17018 + chr2L 22318903 intron CG17018 + chr2L 22318978 intron CG17018 + chr2L_7_22315001 chr2L_22315001 D9 644 chr2L 22341268 22341297 chr2L 22341488 22341517 G-element 13 220 26.5 26.5 26.5 0.5 249 chr2L 22341268 intron CG17018 + chr2L 22341392 intron CG17018 + chr2L 22341517 intron CG17018 + chr2L_13_22340001 chr2L_22340001 D9 645 chr2L 22581959 22581998 chr2L 22583773 22583812 S-element 7 1813 4.0 4.5 4.2 1.3 1853 chr2L 22581959 intron CG17494 + chr2L 22582886 intron CG17494 + chr2L 22583812 intron CG17494 + chr2L_7_22580001 chr2L_22580001 D9 646 chr2L 22679800 22679821 chr2L 22684597 22684618 F-element 8 4797 3.5 6.5 5.0 1.3 4818 chr2L 22679800 intron CG40006 - chr2L 22682209 intron CG40006 - chr2L 22684618 intron CG40006 - chr2L_8_22680001 chr2L_22680001 D9 647 chr2L 22696830 22696879 chr2L 22696937 22696986 17 106 22.5 18.5 20.5 0.8 156 chr2L 22696830 intron CG40006 - chr2L 22696908 intron CG40006 - chr2L 22696986 intron CG40006 - chr2L_17_22695001 chr2L_22695001 D9 648 chr2L 22776396 22776444 chr2L 22778210 22778258 S-element 6 1814 2.5 2.5 2.5 1.7 1862 chr2L 22776396 intergenic not near genes chr2L 22777327 intergenic not near genes chr2L 22778258 intergenic not near genes chr2L_6_22775001 chr2L_22775001 D9 649 chr2L 23006675 23006689 chr2L 23007007 23007019 7 331 32.0 35.5 33.8 0.2 344 chr2L 23006675 intron Cht3 - chr2L 23006847 intron Cht3 - chr2L 23007019 intron Cht3 - chr2L_7_23005001 chr2L_23005001 D9 650 chr2L 23168867 23168882 chr2L 23168968 23168983 6 101 19.5 29.0 24.2 0.2 116 chr2L 23168867 intron,5` UTR CG12567 -,mir-2490 + chr2L 23168925 intron CG12567 - chr2L 23168983 intron CG12567 - chr2L_6_23165001 chr2L_23165001 D9 651 chr2R 469951 469974 chr2R 473217 473226 F-element 4 3262 3.5 5.5 4.5 0.7 3275 chr2R 469951 intergenic not near genes chr2R 471588 intergenic not near genes chr2R 473226 intergenic not near genes chr2R_4_470001 chr2R_470001 D9 652 chr2R 529317 529352 chr2R 537967 538002 Max-element 14 8650 5.0 6.5 5.8 2.1 8685 chr2R 529317 intron CG40378 + chr2R 533660 intron CG40378 + chr2R 538002 intron CG40378 + chr2R_14_530001 chr2R_530001 D9 653 chr2R 552729 552778 chr2R 553969 554021 1360 18 1235 12.5 13.0 12.8 1.3 1292 chr2R 552729 intron CG40378 + chr2R 553375 intron CG40378 + chr2R 554021 intron CG40378 + chr2R_18_550001 chr2R_550001 D9 654 chr2R 672935 672975 chr2R 673035 673077 8 102 5.5 3.5 4.5 1.5 142 chr2R 672935 intergenic not near genes chr2R 673006 intergenic not near genes chr2R 673077 intergenic CG43676 + chr2R_8_670001 chr2R_670001 D9 655 chr2R 1082370 1082382 chr2R 1087151 1087180 Doc 5 4796 8.0 19.0 13.5 0.3 4810 chr2R 1082370 intron rl + chr2R 1084775 intron rl + chr2R 1087180 intron rl + chr2R_5_1080001 chr2R_1080001 D9 656 chr2R 1365855 1365879 chr2R 1365992 1366016 8 136 16.0 8.5 12.2 0.6 161 chr2R 1365855 intron l(2)41Ab + chr2R 1365936 intron l(2)41Ab + chr2R 1366016 intron l(2)41Ab + chr2R_8_1365001 chr2R_1365001 D9 657 chr2R 1516583 1516603 chr2R 1521336 1521356 1731 14 4752 20.0 19.0 19.5 0.7 4773 chr2R 1516583 exon Maf1 - chr2R 1518970 intron Maf1 - chr2R 1521356 5` UTR Maf1 - chr2R_14_1515001 chr2R_1515001 D9 658 chr2R 1600539 1600579 chr2R 1600960 1601000 6 421 33.0 17.5 25.2 0.2 461 chr2R 1600539 intergenic not near genes chr2R 1600770 intergenic not near genes chr2R 1601000 intergenic not near genes chr2R_6_1600001 chr2R_1600001 D9 659 chr2R 1919580 1919604 chr2R 1920031 1920056 6 451 21.5 17.0 19.2 0.3 476 chr2R 1919580 intron CG17684 - chr2R 1919818 intron CG17684 - chr2R 1920056 intron CG17684 - chr2R_6_1915001 chr2R_1915001 D9 660 chr2R 2498962 2499014 chr2R 2508134 2508184 roo 7 9171 3.5 2.5 3.0 1.8 9222 chr2R 2498962 intron MFS17 - chr2R 2503573 intron MFS17 - chr2R 2508184 intron MFS17 - chr2R_7_2500001 chr2R_2500001 D9 661 chr2R 2508286 2508318 chr2R 2508449 2508481 6 163 10.5 12.5 11.5 0.5 195 chr2R 2508286 intron MFS17 - chr2R 2508384 intron MFS17 - chr2R 2508481 intron MFS17 - chr2R_6_2505001 chr2R_2505001 D9 662 chr2R 2944955 2944996 chr2R 2945062 2945103 11 106 13.0 16.5 14.8 0.7 148 chr2R 2944955 intron Scp1 - chr2R 2945029 intron Scp1 - chr2R 2945103 intron Scp1 - chr2R_11_2945001 chr2R_2945001 D9 663 chr2R 3089443 3089495 chr2R 3089648 3089700 7 205 40.5 34.5 37.5 0.2 257 chr2R 3089443 intron CG42596 + chr2R 3089572 intron CG42596 + chr2R 3089700 intron CG42596 + chr2R_7_3085001 chr2R_3085001 D9 664 chr2R 3144060 3144110 chr2R 3393363 3393410 Doc 6 249302 12.0 14.0 13.0 0.4 249350 chr2R 3144060 intron CG42596 + chr2R 3268735 intergenic not near genes chr2R 3393410 intergenic not near genes chr2R_6_3265001 chr2R_3265001 D9 665 chr2R 3293718 3293749 chr2R 3293821 3293852 4 103 6.0 0.5 3.2 1.0 134 chr2R 3293718 intergenic not near genes chr2R 3293785 intergenic not near genes chr2R 3293852 intergenic not near genes chr2R_4_3290001 chr2R_3290001 D9 666 chr2R 3399208 3399256 chr2R 3399319 3399364 7 111 17.5 19.5 18.5 0.4 156 chr2R 3399208 intergenic not near genes chr2R 3399286 intergenic not near genes chr2R 3399364 intergenic not near genes chr2R_7_3395001 chr2R_3395001 D9 667 chr2R 3532607 3532639 chr2R 3536075 3536107 Doc 6 3468 1.0 3.0 2.0 2.0 3500 chr2R 3532607 intergenic not near genes chr2R 3534357 intergenic not near genes chr2R 3536107 intergenic not near genes chr2R_6_3530001 chr2R_3530001 D9 668 chr2R 4602821 4602870 chr2R 4603201 4603250 6 380 16.0 29.0 22.5 0.3 429 chr2R 4602821 intron p120ctn + chr2R 4603036 intron p120ctn + chr2R 4603250 intron p120ctn + chr2R_6_4600001 chr2R_4600001 D9 669 chr2R 4622936 4622980 chr2R 4624111 4624164 1360 6 1182 13.0 9.0 11.0 0.5 1228 chr2R 4622936 intergenic CR44101 - chr2R 4623550 intergenic not near genes chr2R 4624164 intergenic not near genes chr2R_6_4620001 chr2R_4620001 D9 670 chr2R 4750328 4750364 chr2R 4751509 4751546 1360 5 1181 4.5 7.5 6.0 0.7 1218 chr2R 4750328 intron conu + chr2R 4750937 intron conu + chr2R 4751546 intron conu + chr2R_5_4750001 chr2R_4750001 D9 671 chr2R 4783226 4783261 chr2R 4783385 4783420 18 159 14.0 7.0 10.5 1.6 194 chr2R 4783226 intergenic not near genes chr2R 4783323 intergenic not near genes chr2R 4783420 intergenic not near genes chr2R_18_4780001 chr2R_4780001 D9 672 chr2R 4821200 4821237 chr2R 4821311 4821345 4 110 0.0 1.0 0.5 2.7 145 chr2R 4821200 intron CG17528 - chr2R 4821272 intron CG17528 - chr2R 4821345 intron CG17528 - chr2R_4_4820001 chr2R_4820001 D9 673 chr2R 4838860 4838901 chr2R 4840408 4840449 transib2 11 1548 4.5 3.0 3.8 2.3 1589 chr2R 4838860 intergenic not near genes chr2R 4839654 intergenic not near genes chr2R 4840449 intergenic not near genes chr2R_11_4835001 chr2R_4835001 D9 674 chr2R 4908888 4908912 chr2R 4909001 4909025 4 113 19.5 14.5 17.0 0.2 137 chr2R 4908888 intergenic not near genes chr2R 4908956 intergenic not near genes chr2R 4909025 intergenic not near genes chr2R_4_4905001 chr2R_4905001 D9 675 chr2R 4933367 4933388 chr2R 4933956 4933977 8 589 22.0 23.0 22.5 0.3 610 chr2R 4933367 intron Ir41a + chr2R 4933672 intron Ir41a + chr2R 4933977 intron Ir41a + chr2R_8_4930001 chr2R_4930001 D9 676 chr2R 4938486 4938525 chr2R 4938647 4938686 7 161 17.5 13.5 15.5 0.4 200 chr2R 4938486 intron Ir41a + chr2R 4938586 intron Ir41a + chr2R 4938686 intron Ir41a + chr2R_7_4935001 chr2R_4935001 D9 677 chr2R 4942337 4942348 chr2R 4942496 4942501 4 157 2.5 13.0 7.8 0.5 164 chr2R 4942337 intron Ir41a + chr2R 4942419 intron Ir41a + chr2R 4942501 intron Ir41a + chr2R_4_4940001 chr2R_4940001 D9 678 chr2R 5019263 5019307 chr2R 5019374 5019417 9 111 6.0 6.5 6.2 1.2 154 chr2R 5019263 intron Ir41a + chr2R 5019340 intron Ir41a + chr2R 5019417 intron Ir41a + chr2R_9_5015001 chr2R_5015001 D9 679 chr2R 5029012 5029060 chr2R 5029119 5029167 13 106 12.0 13.5 12.8 0.9 155 chr2R 5029012 intergenic not near genes chr2R 5029090 intergenic not near genes chr2R 5029167 intergenic not near genes chr2R_13_5025001 chr2R_5025001 D9 680 chr2R 5075199 5075215 chr2R 5075352 5075366 6 152 13.5 6.0 9.8 0.6 167 chr2R 5075199 intergenic not near genes chr2R 5075282 intergenic not near genes chr2R 5075366 intergenic not near genes chr2R_6_5075001 chr2R_5075001 D9 681 chr2R 5075245 5075371 chr2R 5075761 5075812 8 458 7.5 6.5 7.0 1.0 567 chr2R 5075245 intergenic not near genes chr2R 5075528 intergenic not near genes chr2R 5075812 intergenic not near genes chr2R_8_5075001 chr2R_5075001 D9 682 chr2R 5078655 5078709 chr2R 5078790 5078844 11 134 6.0 5.5 5.8 1.6 189 chr2R 5078655 intergenic not near genes chr2R 5078750 intergenic not near genes chr2R 5078844 intergenic not near genes chr2R_11_5075001 chr2R_5075001 D9 683 chr2R 5096631 5096682 chr2R 5096737 5096788 8 106 14.0 18.5 16.2 0.5 157 chr2R 5096631 intergenic not near genes chr2R 5096710 intergenic not near genes chr2R 5096788 intergenic not near genes chr2R_8_5095001 chr2R_5095001 D9 684 chr2R 5103022 5103072 chr2R 5103128 5103179 12 107 28.5 31.0 29.8 0.4 157 chr2R 5103022 intergenic not near genes chr2R 5103100 intergenic not near genes chr2R 5103179 intergenic not near genes chr2R_12_5100001 chr2R_5100001 D9 685 chr2R 5139996 5140044 chr2R 5140140 5140188 12 143 8.0 10.5 9.2 1.2 192 chr2R 5139996 intergenic not near genes chr2R 5140092 intergenic not near genes chr2R 5140188 intergenic not near genes chr2R_12_5140001 chr2R_5140001 D9 686 chr2R 5150570 5150596 chr2R 5150674 5150702 4 106 17.5 15.0 16.2 0.2 132 chr2R 5150570 intron Atf6 + chr2R 5150636 intron Atf6 + chr2R 5150702 intron Atf6 + chr2R_4_5150001 chr2R_5150001 D9 687 chr2R 5209756 5209812 chr2R 5210314 5210370 6 557 5.0 4.5 4.8 1.0 614 chr2R 5209756 intron Nipped-A - chr2R 5210063 intron Nipped-A - chr2R 5210370 intron Nipped-A - chr2R_6_5210001 chr2R_5210001 D9 688 chr2R 5237346 5237354 chr2R 5237453 5237458 5 106 2.0 0.0 1.0 2.5 112 chr2R 5237346 intron Nipped-A - chr2R 5237402 intron Nipped-A - chr2R 5237458 intron Nipped-A - chr2R_5_5235001 chr2R_5235001 D9 689 chr2R 5240201 5240236 chr2R 5240302 5240337 5 101 11.0 7.0 9.0 0.5 136 chr2R 5240201 intron Nipped-A - chr2R 5240269 intron Nipped-A - chr2R 5240337 intron Nipped-A - chr2R_5_5240001 chr2R_5240001 D9 690 chr2R 5417975 5418015 chr2R 5420632 5420672 Burdock 7 2657 2.5 2.5 2.5 2.0 2697 chr2R 5417975 intron laccase2 + chr2R 5419324 intron laccase2 + chr2R 5420672 intron laccase2 + chr2R_7_5415001 chr2R_5415001 D9 691 chr2R 5455755 5455805 chr2R 5455858 5455908 11 103 11.5 10.0 10.8 0.9 153 chr2R 5455755 3` UTR laccase2 + chr2R 5455832 3` UTR laccase2 + chr2R 5455908 3` UTR laccase2 + chr2R_11_5455001 chr2R_5455001 D9 692 chr2R 5472343 5472372 chr2R 5472461 5472490 7 119 8.0 2.5 5.2 1.1 147 chr2R 5472343 intron CG30440 - chr2R 5472416 intron CG30440 - chr2R 5472490 intron CG30440 - chr2R_7_5470001 chr2R_5470001 D9 693 chr2R 5509505 5509542 chr2R 5509626 5509663 6 121 15.5 15.5 15.5 0.4 158 chr2R 5509505 intron CG30438 + chr2R 5509584 intron CG30438 + chr2R 5509663 intron CG30438 + chr2R_6_5505001 chr2R_5505001 D9 694 chr2R 5534632 5534645 chr2R 5534755 5534758 4 118 19.5 15.5 17.5 0.2 126 chr2R 5534632 intron CG30438 + chr2R 5534695 intron CG30438 + chr2R 5534758 intron CG30438 + chr2R_4_5530001 chr2R_5530001 D9 695 chr2R 5540054 5540110 chr2R 5540398 5540454 8 344 8.5 6.0 7.2 1.0 400 chr2R 5540054 intron CG30438 + chr2R 5540254 intron CG30438 + chr2R 5540454 intron CG30438 + chr2R_8_5540001 chr2R_5540001 D9 696 chr2R 5581405 5581416 chr2R 5627639 5627650 6 46234 5.0 21.5 13.2 0.4 46245 chr2R 5581405 intergenic not near genes chr2R 5604528 intron Fis1 - chr2R 5627650 intergenic not near genes chr2R_6_5600001 chr2R_5600001 D9 697 chr2R 5621347 5621399 chr2R 5621452 5621504 5 105 26.0 23.0 24.5 0.2 157 chr2R 5621347 intergenic not near genes chr2R 5621426 intergenic not near genes chr2R 5621504 intergenic not near genes chr2R_5_5620001 chr2R_5620001 D9 698 chr2R 5653335 5653381 chr2R 5653457 5653504 8 124 4.5 6.5 5.5 1.2 169 chr2R 5653335 intergenic CG1344 + chr2R 5653420 intergenic CG1344 + chr2R 5653504 intergenic CG1344 + chr2R_8_5650001 chr2R_5650001 D9 699 chr2R 5660061 5660108 chr2R 5660168 5660216 4 108 4.5 4.5 4.5 0.7 155 chr2R 5660061 intron Not3 - chr2R 5660138 intron Not3 - chr2R 5660216 intron Not3 - chr2R_4_5660001 chr2R_5660001 D9 700 chr2R 5664266 5664305 chr2R 5664371 5664410 8 105 11.0 10.5 10.8 0.7 144 chr2R 5664266 5` UTR CR45472 + chr2R 5664338 intron CR45472 + chr2R 5664410 intron CR45472 + chr2R_8_5660001 chr2R_5660001 D9 701 chr2R 5674571 5674617 chr2R 5674676 5674725 7 106 1.5 0.5 1.0 3.5 154 chr2R 5674571 intergenic not near genes chr2R 5674648 intergenic not near genes chr2R 5674725 intergenic not near genes chr2R_7_5670001 chr2R_5670001 D9 702 chr2R 5710632 5710677 chr2R 5710734 5710779 6 102 7.5 6.0 6.8 0.8 147 chr2R 5710632 intron ap - chr2R 5710706 intron ap - chr2R 5710779 intron ap - chr2R_6_5710001 chr2R_5710001 D9 703 chr2R 5750433 5750452 chr2R 5750544 5750569 6 116 5.5 4.0 4.8 1.0 136 chr2R 5750433 intergenic not near genes chr2R 5750501 intergenic not near genes chr2R 5750569 intergenic not near genes chr2R_6_5750001 chr2R_5750001 D9 704 chr2R 5771454 5771492 chr2R 5771560 5771598 4 106 16.5 10.0 13.2 0.3 144 chr2R 5771454 intron Gp210 + chr2R 5771526 intron Gp210 + chr2R 5771598 intron Gp210 + chr2R_4_5770001 chr2R_5770001 D9 705 chr2R 5827564 5827623 chr2R 5827704 5827763 20 139 6.0 7.5 6.8 2.6 199 chr2R 5827564 intron dpr12 + chr2R 5827664 intron dpr12 + chr2R 5827763 intron dpr12 + chr2R_20_5825001 chr2R_5825001 D9 706 chr2R 5837104 5837142 chr2R 5837225 5837262 10 120 21.5 24.0 22.8 0.4 158 chr2R 5837104 intron dpr12 + chr2R 5837183 intron dpr12 + chr2R 5837262 intron dpr12 + chr2R_10_5835001 chr2R_5835001 D9 707 chr2R 5876845 5876880 chr2R 5876970 5877007 9 126 15.5 18.5 17.0 0.5 162 chr2R 5876845 intergenic not near genes chr2R 5876926 intergenic not near genes chr2R 5877007 intergenic not near genes chr2R_9_5875001 chr2R_5875001 D9 708 chr2R 5878914 5878957 chr2R 5879006 5879062 5 102 0.5 1.5 1.0 2.5 148 chr2R 5878914 intergenic CG44438 - chr2R 5878988 intergenic CG44438 - chr2R 5879062 intergenic CG44438 - chr2R_5_5875001 chr2R_5875001 D9 709 chr2R 5885360 5885372 chr2R 5885514 5885526 4 154 3.0 2.0 2.5 1.1 166 chr2R 5885360 5` UTR CR44125 + chr2R 5885443 5` UTR CR44125 + chr2R 5885526 5` UTR CR44125 + chr2R_4_5885001 chr2R_5885001 D9 710 chr2R 5902136 5902187 chr2R 5909720 5909771 17.6 6 7584 2.5 1.5 2.0 2.0 7635 chr2R 5902136 intron CG43366 + chr2R 5905954 intron CG43366 + chr2R 5909771 intron CG43366 + chr2R_6_5905001 chr2R_5905001 D9 711 chr2R 6033421 6033465 chr2R 6033531 6033567 7 109 19.5 18.5 19.0 0.3 146 chr2R 6033421 intron SCAP - chr2R 6033494 intron SCAP - chr2R 6033567 intron SCAP - chr2R_7_6030001 chr2R_6030001 D9 712 chr2R 6096698 6096750 chr2R 6101921 6101960 BS 30 5222 5.0 10.0 7.5 3.5 5262 chr2R 6096698 intron EcR - chr2R 6099329 intron EcR - chr2R 6101960 intron EcR - chr2R_30_6095001 chr2R_6095001 D9 713 chr2R 6124163 6124221 chr2R 6124286 6124344 4 123 5.0 2.0 3.5 0.9 181 chr2R 6124163 intron EcR - chr2R 6124254 intron EcR - chr2R 6124344 intron EcR - chr2R_4_6120001 chr2R_6120001 D9 714 chr2R 6129316 6129343 chr2R 6129419 6129446 5 103 16.5 13.5 15.0 0.3 130 chr2R 6129316 intron EcR - chr2R 6129381 intron EcR - chr2R 6129446 intron EcR - chr2R_5_6125001 chr2R_6125001 D9 715 chr2R 6173650 6173705 chr2R 6174378 6174433 7 729 15.0 15.5 15.2 0.4 783 chr2R 6173650 intergenic Cyp6w1 + chr2R 6174042 exon Cyp6w1 + chr2R 6174433 exon Cyp6w1 + chr2R_7_6170001 chr2R_6170001 D9 716 chr2R 6194668 6194681 chr2R 6194773 6194789 6 108 7.0 8.5 7.8 0.7 121 chr2R 6194668 intron Ptr - chr2R 6194728 intron Ptr - chr2R 6194789 intron Ptr - chr2R_6_6190001 chr2R_6190001 D9 717 chr2R 6494505 6494548 chr2R 6499292 6499333 F-element 15 4786 9.0 2.0 5.5 2.3 4828 chr2R 6494505 intergenic not near genes chr2R 6496919 intergenic not near genes chr2R 6499333 intergenic not near genes chr2R_15_6495001 chr2R_6495001 D9 718 chr2R 6530751 6530794 chr2R 6530854 6530899 6 105 9.0 8.5 8.8 0.6 148 chr2R 6530751 intron jing + chr2R 6530825 intron jing + chr2R 6530899 intron jing + chr2R_6_6530001 chr2R_6530001 D9 719 chr2R 6539796 6539855 chr2R 6539944 6539993 12 142 2.0 3.0 2.5 3.4 197 chr2R 6539796 intron jing + chr2R 6539894 intron jing + chr2R 6539993 intron jing + chr2R_12_6535001 chr2R_6535001 D9 720 chr2R 6546692 6546746 chr2R 6546818 6546869 12 126 7.0 9.0 8.0 1.3 177 chr2R 6546692 intron jing + chr2R 6546780 intron jing + chr2R 6546869 intron jing + chr2R_12_6545001 chr2R_6545001 D9 721 chr2R 6577917 6577971 chr2R 6578023 6578077 8 106 18.0 22.0 20.0 0.4 160 chr2R 6577917 intron jing + chr2R 6577997 intron jing + chr2R 6578077 intron jing + chr2R_8_6575001 chr2R_6575001 D9 722 chr2R 6579752 6579806 chr2R 6584863 6584918 flea 9 5111 1.5 2.5 2.0 3.0 5166 chr2R 6579752 intron jing + chr2R 6582335 intron jing + chr2R 6584918 intron jing + chr2R_9_6580001 chr2R_6580001 D9 723 chr2R 6603922 6603967 chr2R 6604039 6604083 16 117 9.0 8.0 8.5 1.7 161 chr2R 6603922 intron jing + chr2R 6604002 intron jing + chr2R 6604083 intron jing + chr2R_16_6600001 chr2R_6600001 D9 724 chr2R 6633172 6633224 chr2R 6633274 6633326 5 102 9.5 8.5 9.0 0.5 154 chr2R 6633172 intergenic Vha16-1 -,Trap1 - chr2R 6633249 intergenic Vha16-1 -,Trap1 - chr2R 6633326 intergenic Vha16-1 -,Trap1 - chr2R_5_6630001 chr2R_6630001 D9 725 chr2R 6699566 6699613 chr2R 6699676 6699723 8 110 5.0 4.5 4.8 1.4 157 chr2R 6699566 intergenic Rab2 + chr2R 6699644 intergenic Rab2 + chr2R 6699723 intergenic Rab2 +,CG3409 -,CG45092 - chr2R_8_6695001 chr2R_6695001 D9 726 chr2R 6741504 6741519 chr2R 6741603 6741621 5 102 8.5 11.0 9.8 0.5 117 chr2R 6741504 intergenic phtf + chr2R 6741562 intergenic phtf + chr2R 6741621 intergenic phtf + chr2R_5_6740001 chr2R_6740001 D9 727 chr2R 6906402 6906448 chr2R 6906526 6906572 4 124 18.5 16.0 17.2 0.2 170 chr2R 6906402 intron CG30158 + chr2R 6906487 intron CG30158 + chr2R 6906572 intron CG30158 + chr2R_4_6905001 chr2R_6905001 D9 728 chr2R 6941451 6941506 chr2R 6941600 6941655 22 148 13.5 9.5 11.5 1.8 204 chr2R 6941451 intron mim - chr2R 6941553 intron mim - chr2R 6941655 intron mim - chr2R_22_6940001 chr2R_6940001 D9 729 chr2R 6948097 6948139 chr2R 6951856 6951898 13 3759 24.5 33.0 28.8 0.4 3801 chr2R 6948097 intron,intron mim -,CheB42c - chr2R 6949998 intron,intron,intron mim -,CheB42c -,CheB42a + chr2R 6951898 intron,intron,intron mim -,CheB42c -,ppk25 + chr2R_13_6945001 chr2R_6945001 D9 730 chr2R 6964078 6964089 chr2R 6964362 6964373 4 284 13.5 7.0 10.2 0.4 295 chr2R 6964078 intron,intron mim -,CheB42c - chr2R 6964226 intron,intron mim -,CheB42c - chr2R 6964373 intron,intron mim -,CheB42c - chr2R_4_6960001 chr2R_6960001 D9 731 chr2R 7103355 7103414 chr2R 7103456 7103515 12 101 5.5 10.0 7.8 1.4 160 chr2R 7103355 intron esn + chr2R 7103435 intron esn + chr2R 7103515 intron esn + chr2R_12_7100001 chr2R_7100001 D9 732 chr2R 7139945 7139949 chr2R 7141462 7141466 hopper2 4 1517 6.5 20.0 13.2 0.3 1521 chr2R 7139945 intergenic not near genes chr2R 7140706 intergenic not near genes chr2R 7141466 intergenic not near genes chr2R_4_7140001 chr2R_7140001 D9 733 chr2R 7160527 7160579 chr2R 7160630 7160682 6 102 2.5 0.5 1.5 2.4 155 chr2R 7160527 intron pk + chr2R 7160604 intron pk + chr2R 7160682 intron pk + chr2R_6_7160001 chr2R_7160001 D9 734 chr2R 7164248 7164288 chr2R 7164464 7164504 10 216 1.5 7.5 4.5 1.8 256 chr2R 7164248 intron pk + chr2R 7164376 intron pk + chr2R 7164504 intron pk + chr2R_10_7160001 chr2R_7160001 D9 735 chr2R 7235798 7235847 chr2R 7240915 7240964 jockey 15 5117 3.0 2.0 2.5 4.3 5166 chr2R 7235798 intergenic not near genes chr2R 7238381 intergenic not near genes chr2R 7240964 intergenic not near genes chr2R_15_7235001 chr2R_7235001 D9 736 chr2R 7311760 7311803 chr2R 7311863 7311906 7 103 4.5 8.5 6.5 0.9 146 chr2R 7311760 intron CG12164 + chr2R 7311833 intron CG12164 + chr2R 7311906 intron CG12164 + chr2R_7_7310001 chr2R_7310001 D9 737 chr2R 7328103 7328150 chr2R 7328239 7328286 11 136 2.5 1.5 2.0 3.7 183 chr2R 7328103 intron,intron Dscam1 -,CR45129 + chr2R 7328194 intron,intron Dscam1 -,CR45129 + chr2R 7328286 intron,intron Dscam1 -,CR45129 + chr2R_11_7325001 chr2R_7325001 D9 738 chr2R 7353390 7353410 chr2R 7353509 7353541 7 129 9.0 10.5 9.8 0.6 151 chr2R 7353390 intron Dscam1 - chr2R 7353466 intron Dscam1 - chr2R 7353541 intron Dscam1 - chr2R_7_7350001 chr2R_7350001 D9 739 chr2R 7371724 7371778 chr2R 7371853 7371907 10 129 14.0 16.0 15.0 0.6 183 chr2R 7371724 intron Dscam1 - chr2R 7371816 intron Dscam1 - chr2R 7371907 intron Dscam1 - chr2R_10_7370001 chr2R_7370001 D9 740 chr2R 7417880 7418165 chr2R 7417991 7418269 13 106 6.5 8.0 7.2 1.6 389 chr2R 7417880 intergenic not near genes chr2R 7418074 intergenic not near genes chr2R 7418269 intergenic not near genes chr2R_13_7415001 chr2R_7415001 D9 741 chr2R 7434882 7434911 chr2R 7439208 7439235 Juan 9 4324 3.5 7.0 5.2 1.5 4353 chr2R 7434882 intergenic so + chr2R 7437058 intergenic not near genes chr2R 7439235 intergenic not near genes chr2R_9_7435001 chr2R_7435001 D9 742 chr2R 7531437 7531486 chr2R 7531904 7531953 7 467 4.0 7.5 5.8 1.0 516 chr2R 7531437 intron Drat - chr2R 7531695 intron Drat - chr2R 7531953 intron Drat - chr2R_7_7530001 chr2R_7530001 D9 743 chr2R 7607054 7607070 chr2R 7607352 7607368 6 298 8.5 3.5 6.0 0.9 314 chr2R 7607054 intron CG1358 - chr2R 7607211 intron CG1358 - chr2R 7607368 intron CG1358 - chr2R_6_7605001 chr2R_7605001 D9 744 chr2R 7608387 7608442 chr2R 7613615 7613669 I-element 8 5228 1.0 0.5 0.8 4.4 5282 chr2R 7608387 intron CG1358 - chr2R 7611028 intron CG1358 - chr2R 7613669 intron CG1358 - chr2R_8_7610001 chr2R_7610001 D9 745 chr2R 7642847 7642890 chr2R 7642952 7642995 8 105 16.5 14.5 15.5 0.5 148 chr2R 7642847 intron CG43340 + chr2R 7642921 intron CG43340 + chr2R 7642995 intron CG43340 + chr2R_8_7640001 chr2R_7640001 D9 746 chr2R 7677408 7677446 chr2R 7677563 7677595 4 153 7.0 8.0 7.5 0.5 187 chr2R 7677408 3` UTR CG1399 - chr2R 7677502 3` UTR CG1399 - chr2R 7677595 3` UTR CG1399 - chr2R_4_7675001 chr2R_7675001 D9 747 chr2R 7691987 7692037 chr2R 7692093 7692143 10 106 3.5 1.5 2.5 2.9 156 chr2R 7691987 intron CG1399 - chr2R 7692065 intron CG1399 - chr2R 7692143 intron CG1399 - chr2R_10_7690001 chr2R_7690001 D9 748 chr2R 7737898 7738180 chr2R 7738002 7738282 6 102 9.5 6.5 8.0 0.7 384 chr2R 7737898 intergenic not near genes chr2R 7738090 intergenic not near genes chr2R 7738282 intergenic not near genes chr2R_6_7735001 chr2R_7735001 D9 749 chr2R 7760259 7760307 chr2R 7760421 7760469 8 162 17.5 18.5 18.0 0.4 210 chr2R 7760259 intron,intron CG30497 -,CG45093 - chr2R 7760364 intron,intron CG30497 -,CG45093 - chr2R 7760469 intron,intron CG30497 -,CG45093 - chr2R_8_7760001 chr2R_7760001 D9 750 chr2R 7769716 7769770 chr2R 7769817 7769872 6 102 7.0 7.0 7.0 0.8 156 chr2R 7769716 intron,intron CG30497 -,CG45093 - chr2R 7769794 intron,intron CG30497 -,CG45093 - chr2R 7769872 intron,intron CG30497 -,CG45093 - chr2R_6_7765001 chr2R_7765001 D9 751 chr2R 7815651 7815698 chr2R 7822145 7822192 Burdock 10 6494 5.0 5.5 5.2 1.6 6541 chr2R 7815651 intergenic CG1882 + chr2R 7818922 intergenic not near genes chr2R 7822192 3` UTR cathD - chr2R_10_7815001 chr2R_7815001 D9 752 chr2R 7842185 7842228 chr2R 7842298 7842336 12 112 15.5 19.5 17.5 0.6 151 chr2R 7842185 intron Dgk - chr2R 7842260 intron Dgk - chr2R 7842336 intron Dgk - chr2R_12_7840001 chr2R_7840001 D9 753 chr2R 7862210 7862250 chr2R 7867347 7867388 flea 7 5137 13.5 2.0 7.8 0.8 5178 chr2R 7862210 intron Dgk - chr2R 7864799 intron Dgk - chr2R 7867388 intron Dgk - chr2R_7_7860001 chr2R_7860001 D9 754 chr2R 7869177 7869206 chr2R 7873986 7874017 Doc 7 4811 5.5 5.5 5.5 1.1 4840 chr2R 7869177 intron Dgk - chr2R 7871597 intron Dgk - chr2R 7874017 intron Dgk - chr2R_7_7870001 chr2R_7870001 D9 755 chr2R 7915693 7915740 chr2R 7915810 7915855 7 116 9.5 5.5 7.5 0.8 162 chr2R 7915693 intron CG12159 - chr2R 7915774 intron CG12159 - chr2R 7915855 intron CG12159 - chr2R_7_7915001 chr2R_7915001 D9 756 chr2R 7920140 7920190 chr2R 7920252 7920302 10 112 32.5 32.0 32.2 0.3 162 chr2R 7920140 exon Cul1 + chr2R 7920221 exon Cul1 + chr2R 7920302 exon Cul1 + chr2R_10_7920001 chr2R_7920001 D9 757 chr2R 7919998 7920029 chr2R 7924497 7924528 11 4499 41.0 54.0 47.5 0.2 4530 chr2R 7919998 intron Cul1 + chr2R 7922263 exon Or43b - chr2R 7924528 exon Kdm4A - chr2R_11_7920001 chr2R_7920001 D9 758 chr2R 8015628 8015637 chr2R 8017676 8017685 5 2048 16.0 6.5 11.2 0.4 2057 chr2R 8015628 intergenic mir-4981 + chr2R 8016656 intergenic not near genes chr2R 8017685 intergenic not near genes chr2R_5_8015001 chr2R_8015001 D9 759 chr2R 8015639 8015673 chr2R 8017674 8017721 18 2046 7.0 6.5 6.8 2.3 2082 chr2R 8015639 intergenic mir-4981 + chr2R 8016680 intergenic not near genes chr2R 8017721 intergenic not near genes chr2R_18_8015001 chr2R_8015001 D9 760 chr2R 8026789 8026816 chr2R 8026890 8026917 4 100 8.5 10.5 9.5 0.4 128 chr2R 8026789 intergenic CR45267 + chr2R 8026853 intergenic CR45267 + chr2R 8026917 intergenic CR45267 + chr2R_4_8025001 chr2R_8025001 D9 761 chr2R 8036239 8036273 chr2R 8036346 8036380 6 107 11.0 16.5 13.8 0.4 141 chr2R 8036239 intron Optix + chr2R 8036310 intron Optix + chr2R 8036380 intron Optix + chr2R_6_8035001 chr2R_8035001 D9 762 chr2R 8051197 8051239 chr2R 8051307 8051349 12 110 12.0 10.5 11.2 1.0 152 chr2R 8051197 intergenic not near genes chr2R 8051273 intergenic not near genes chr2R 8051349 intergenic not near genes chr2R_12_8050001 chr2R_8050001 D9 763 chr2R 8067041 8067088 chr2R 8067150 8067197 7 109 7.0 13.5 10.2 0.6 156 chr2R 8067041 intron CG17977 - chr2R 8067119 intron CG17977 - chr2R 8067197 exon CG17977 - chr2R_7_8065001 chr2R_8065001 D9 764 chr2R 8089238 8089271 chr2R 8089349 8089382 4 111 9.5 13.0 11.2 0.3 144 chr2R 8089238 3` UTR sut2 + chr2R 8089310 intergenic sut2 +,sut3 + chr2R 8089382 intergenic sut2 +,sut3 + chr2R_4_8085001 chr2R_8085001 D9 765 chr2R 8105914 8105963 chr2R 8106030 8106079 16 116 15.0 13.5 14.2 1.1 165 chr2R 8105914 5` UTR Cul4 - chr2R 8105996 intron Cul4 - chr2R 8106079 5` UTR Cul4 - chr2R_16_8105001 chr2R_8105001 D9 766 chr2R 8155560 8155612 chr2R 8155674 8155726 16 114 6.5 7.5 7.0 2.0 166 chr2R 8155560 intron,intron Lpin -,kermit - chr2R 8155643 intron,intron Lpin -,kermit - chr2R 8155726 intron,intron Lpin -,kermit - chr2R_16_8155001 chr2R_8155001 D9 767 chr2R 8160909 8160949 chr2R 8161024 8161064 1360 13 115 20.5 25.5 23.0 0.5 155 chr2R 8160909 exon CG8708 - chr2R 8160986 intron CG8708 - chr2R 8161064 intron CG8708 - chr2R_13_8160001 chr2R_8160001 D9 768 chr2R 8191864 8191899 chr2R 8191977 8192012 9 112 6.5 7.0 6.8 1.2 148 chr2R 8191864 intron LRP1 + chr2R 8191938 intron LRP1 + chr2R 8192012 intron LRP1 + chr2R_9_8190001 chr2R_8190001 D9 769 chr2R 8236015 8236052 chr2R 8236121 8236157 6 105 6.0 2.5 4.2 1.2 142 chr2R 8236015 intergenic not near genes chr2R 8236086 intergenic not near genes chr2R 8236157 intergenic not near genes chr2R_6_8235001 chr2R_8235001 D9 770 chr2R 8330840 8330888 chr2R 8331351 8331399 roo 18 510 6.5 3.5 5.0 3.0 559 chr2R 8330840 intron pdm3 + chr2R 8331120 intron pdm3 + chr2R 8331399 intron pdm3 + chr2R_18_8330001 chr2R_8330001 D9 771 chr2R 8398190 8398241 chr2R 8402996 8403047 Doc 21 4805 8.0 7.5 7.8 2.4 4857 chr2R 8398190 intron CG2121 - chr2R 8400618 intron CG2121 - chr2R 8403047 intron CG2121 - chr2R_21_8400001 chr2R_8400001 D9 772 chr2R 8419359 8419381 chr2R 8419467 8419489 6 108 12.5 9.0 10.8 0.5 130 chr2R 8419359 intergenic not near genes chr2R 8419424 intergenic not near genes chr2R 8419489 intergenic not near genes chr2R_6_8415001 chr2R_8415001 D9 773 chr2R 8512743 8512799 chr2R 8512847 8512903 17 103 25.0 28.0 26.5 0.6 160 chr2R 8512743 intron mtt - chr2R 8512823 intron mtt - chr2R 8512903 intron mtt - chr2R_17_8510001 chr2R_8510001 D9 774 chr2R 8536176 8536229 chr2R 8536433 8536486 11 257 14.0 14.0 14.0 0.7 310 chr2R 8536176 intergenic not near genes chr2R 8536331 intergenic not near genes chr2R 8536486 intergenic not near genes chr2R_11_8535001 chr2R_8535001 D9 775 chr2R 8612564 8612606 chr2R 8612666 8612708 6 102 3.0 5.5 4.2 1.2 144 chr2R 8612564 intron CG8642 - chr2R 8612636 intron CG8642 - chr2R 8612708 intron CG8642 - chr2R_6_8610001 chr2R_8610001 D9 776 chr2R 8722746 8722793 chr2R 8723012 8723059 pogo 16 264 5.5 8.0 6.8 2.1 313 chr2R 8722746 intron CG14767 - chr2R 8722902 intron CG14767 - chr2R 8723059 intron CG14767 - chr2R_16_8720001 chr2R_8720001 D9 777 chr2R 8729887 8729908 chr2R 8729993 8730014 10 106 16.0 18.0 17.0 0.6 127 chr2R 8729887 intron stmA - chr2R 8729950 intron stmA - chr2R 8730014 intron stmA - chr2R_10_8725001 chr2R_8725001 D9 778 chr2R 8764096 8764128 chr2R 8764270 8764302 12 174 22.5 25.0 23.8 0.5 206 chr2R 8764096 intergenic not near genes chr2R 8764199 intergenic not near genes chr2R 8764302 intergenic not near genes chr2R_12_8760001 chr2R_8760001 D9 779 chr2R 8777899 8777940 chr2R 8784128 8784169 diver 4 6229 1.5 3.0 2.2 1.2 6270 chr2R 8777899 intergenic not near genes chr2R 8781034 intergenic not near genes chr2R 8784169 intergenic not near genes chr2R_4_8780001 chr2R_8780001 D9 780 chr2R 8835435 8835466 chr2R 8835530 8835566 11 99 28.5 26.0 27.2 0.4 131 chr2R 8835435 intron sns + chr2R 8835500 intron sns + chr2R 8835566 intron sns + chr2R_11_8835001 chr2R_8835001 D9 781 chr2R 8847165 8847193 chr2R 8847292 8847320 9 123 12.0 21.0 16.5 0.5 155 chr2R 8847165 intron sns + chr2R 8847242 intron sns + chr2R 8847320 intron sns + chr2R_9_8845001 chr2R_8845001 D9 782 chr2R 8924432 8924459 chr2R 8924534 8924561 15 102 27.5 21.0 24.2 0.6 129 chr2R 8924432 exon CG8243 + chr2R 8924496 exon CG8243 + chr2R 8924561 exon CG8243 + chr2R_15_8920001 chr2R_8920001 D9 783 chr2R 8960429 8960476 chr2R 8960606 8960653 6 176 15.5 16.0 15.8 0.4 224 chr2R 8960429 exon babo + chr2R 8960541 3` UTR babo + chr2R 8960653 3` UTR babo + chr2R_6_8960001 chr2R_8960001 D9 784 chr2R 8976176 8976223 chr2R 8976290 8976337 10 114 12.5 8.0 10.2 0.9 161 chr2R 8976176 intron CG8213 - chr2R 8976256 intron CG8213 - chr2R 8976337 intron CG8213 - chr2R_10_8975001 chr2R_8975001 D9 785 chr2R 9033504 9033558 chr2R 9033630 9033684 7 125 17.0 20.5 18.8 0.4 180 chr2R 9033504 intergenic not near genes chr2R 9033594 intergenic not near genes chr2R 9033684 intergenic not near genes chr2R_7_9030001 chr2R_9030001 D9 786 chr2R 9075879 9075920 chr2R 9076037 9076080 13 160 13.5 8.5 11.0 1.1 201 chr2R 9075879 exon ana + chr2R 9075980 intron ana + chr2R 9076080 intron ana + chr2R_13_9075001 chr2R_9075001 D9 787 chr2R 9151279 9151332 chr2R 9157774 9157827 Burdock 21 6495 5.5 4.0 4.8 3.6 6548 chr2R 9151279 exon CG30345 + chr2R 9154553 intergenic not near genes chr2R 9157827 intergenic CG8008 - chr2R_21_9150001 chr2R_9150001 D9 788 chr2R 9161693 9161743 chr2R 9161808 9161848 7 106 23.0 22.0 22.5 0.3 155 chr2R 9161693 5` UTR CR44283 + chr2R 9161770 5` UTR CR44283 + chr2R 9161848 5` UTR CR44283 + chr2R_7_9160001 chr2R_9160001 D9 789 chr2R 9212672 9212720 chr2R 9213183 9213231 roo 35 510 8.5 12.0 10.2 3.1 559 chr2R 9212672 intergenic CR45309 + chr2R 9212952 intergenic CR45309 + chr2R 9213231 5` UTR CR45309 + chr2R_35_9210001 chr2R_9210001 D9 790 chr2R 9227848 9227901 chr2R 9227960 9228013 8 112 12.0 9.5 10.8 0.7 165 chr2R 9227848 3` UTR hig - chr2R 9227930 3` UTR hig - chr2R 9228013 3` UTR hig - chr2R_8_9225001 chr2R_9225001 D9 791 chr2R 9230200 9230240 chr2R 9230303 9230345 13 105 13.0 19.0 16.0 0.8 145 chr2R 9230200 intron hig - chr2R 9230272 intron hig - chr2R 9230345 exon hig - chr2R_13_9230001 chr2R_9230001 D9 792 chr2R 9237261 9237297 chr2R 9237364 9237401 5 104 4.5 5.5 5.0 0.8 140 chr2R 9237261 intron hig - chr2R 9237331 intron hig - chr2R 9237401 intron hig - chr2R_5_9235001 chr2R_9235001 D9 793 chr2R 9249223 9249280 chr2R 9249332 9249385 6 107 12.0 20.5 16.2 0.3 162 chr2R 9249223 intergenic not near genes chr2R 9249304 intergenic not near genes chr2R 9249385 intergenic not near genes chr2R_6_9245001 chr2R_9245001 D9 794 chr2R 9256029 9256076 chr2R 9256136 9256184 12 108 14.5 19.5 17.0 0.7 155 chr2R 9256029 intron Pkn - chr2R 9256106 intron Pkn - chr2R 9256184 intron Pkn - chr2R_12_9255001 chr2R_9255001 D9 795 chr2R 9282040 9282093 chr2R 9286045 9286098 21 4005 34.0 57.5 45.8 0.4 4058 chr2R 9282040 intron Pkn - chr2R 9284069 5` UTR Pkn - chr2R 9286098 exon CG2063 - chr2R_21_9280001 chr2R_9280001 D9 796 chr2R 9329978 9330025 chr2R 9330089 9330136 22 111 14.0 12.5 13.2 1.5 158 chr2R 9329978 intron,intron CG13739 -,CG13954 - chr2R 9330057 intron,intron CG13739 -,CG13954 - chr2R 9330136 intron,intron CG13739 -,CG13954 - chr2R_22_9330001 chr2R_9330001 D9 797 chr2R 9391036 9391087 chr2R 9391622 9391673 5 586 15.5 26.0 20.8 0.2 637 chr2R 9391036 exon l(2)03659 + chr2R 9391354 exon l(2)03659 + chr2R 9391673 exon l(2)03659 + chr2R_5_9390001 chr2R_9390001 D9 798 chr2R 9429778 9429824 chr2R 9429908 9429954 17 129 11.5 9.5 10.5 1.5 176 chr2R 9429778 intron Pdk + chr2R 9429866 intron Pdk + chr2R 9429954 intron Pdk + chr2R_17_9425001 chr2R_9425001 D9 799 chr2R 9466652 9466679 chr2R 9466758 9466785 8 105 5.0 3.5 4.2 1.5 133 chr2R 9466652 intron Camta + chr2R 9466718 intron Camta + chr2R 9466785 intron Camta + chr2R_8_9465001 chr2R_9465001 D9 800 chr2R 9480059 9480101 chr2R 9490615 9490655 roo 5 10556 3.5 3.5 3.5 1.1 10596 chr2R 9480059 intergenic not near genes chr2R 9485357 intergenic not near genes chr2R 9490655 intergenic not near genes chr2R_5_9485001 chr2R_9485001 D9 801 chr2R 9509417 9509454 chr2R 9509524 9509563 15 108 8.0 4.0 6.0 2.1 146 chr2R 9509417 intron brp + chr2R 9509490 intron brp + chr2R 9509563 intron brp + chr2R_15_9505001 chr2R_9505001 D9 802 chr2R 9510654 9510691 chr2R 9510795 9510832 7 141 24.5 23.0 23.8 0.3 178 chr2R 9510654 exon brp + chr2R 9510743 intron brp + chr2R 9510832 exon brp + chr2R_7_9510001 chr2R_9510001 D9 803 chr2R 9561802 9561849 chr2R 9561913 9561962 10 112 0.0 4.0 2.0 3.3 160 chr2R 9561802 3` UTR,intron CR45281 -,CG1809 + chr2R 9561882 3` UTR,intron CR45281 -,CG1809 + chr2R 9561962 3` UTR,intron CR45281 -,CG1809 + chr2R_10_9560001 chr2R_9560001 D9 804 chr2R 9629572 9629616 chr2R 9629778 9629822 7 206 4.5 6.5 5.5 1.1 250 chr2R 9629572 intron Mmp2 - chr2R 9629697 intron Mmp2 - chr2R 9629822 intron Mmp2 - chr2R_7_9625001 chr2R_9625001 D9 805 chr2R 9669116 9669168 chr2R 9669241 9669294 12 126 8.0 4.0 6.0 1.7 178 chr2R 9669116 intron Mmp2 - chr2R 9669205 intron Mmp2 - chr2R 9669294 intron Mmp2 - chr2R_12_9665001 chr2R_9665001 D9 806 chr2R 9671165 9671218 chr2R 9671265 9671320 4 102 6.0 6.0 6.0 0.6 155 chr2R 9671165 intron Mmp2 - chr2R 9671242 intron Mmp2 - chr2R 9671320 intron Mmp2 - chr2R_4_9670001 chr2R_9670001 D9 807 chr2R 9699381 9699440 chr2R 9699493 9699552 22 111 4.0 2.5 3.2 5.2 171 chr2R 9699381 intergenic not near genes chr2R 9699466 intergenic not near genes chr2R 9699552 intergenic not near genes chr2R_22_9695001 chr2R_9695001 D9 808 chr2R 9707203 9707251 chr2R 9707324 9707372 15 121 14.0 18.0 16.0 0.9 169 chr2R 9707203 exon CG1773 + chr2R 9707288 exon CG1773 + chr2R 9707372 exon CG1773 + chr2R_15_9705001 chr2R_9705001 D9 809 chr2R 9725028 9725076 chr2R 9725132 9725180 6 104 7.0 4.5 5.8 0.9 152 chr2R 9725028 intron sqa - chr2R 9725104 intron sqa - chr2R 9725180 intron sqa - chr2R_6_9725001 chr2R_9725001 D9 810 chr2R 9726605 9726632 chr2R 9734168 9734208 17.6 8 7574 6.0 2.5 4.2 1.5 7603 chr2R 9726605 intron sqa - chr2R 9730406 intron sqa - chr2R 9734208 intron sqa - chr2R_8_9730001 chr2R_9730001 D9 811 chr2R 9859198 9859242 chr2R 9861523 9861568 5 2325 15.0 14.0 14.5 0.3 2370 chr2R 9859198 intron CG1516 - chr2R 9860383 intron CG1516 - chr2R 9861568 intergenic CR44293 +,CG1516 - chr2R_5_9860001 chr2R_9860001 D9 812 chr2R 9871022 9871066 chr2R 9871533 9871577 roo 13 510 2.0 4.0 3.0 3.2 555 chr2R 9871022 intron cbx - chr2R 9871300 intron cbx - chr2R 9871577 intron,5` UTR cbx -,CG18446 + chr2R_13_9870001 chr2R_9870001 D9 813 chr2R 9945418 9945464 chr2R 9945639 9945685 BS 14 221 1.5 8.0 4.8 2.4 267 chr2R 9945418 intron Mef2 - chr2R 9945552 intron Mef2 - chr2R 9945685 intron Mef2 - chr2R_14_9945001 chr2R_9945001 D9 814 chr2R 9998078 9998089 chr2R 9998195 9998208 4 118 4.0 9.5 6.8 0.5 130 chr2R 9998078 intron Pka-R2 - chr2R 9998143 intron Pka-R2 - chr2R 9998208 intron Pka-R2 - chr2R_4_9995001 chr2R_9995001 D9 815 chr2R 10005542 10005574 chr2R 10005664 10005696 6 122 2.5 4.0 3.2 1.4 154 chr2R 10005542 intron Pka-R2 - chr2R 10005619 intron Pka-R2 - chr2R 10005696 intron Pka-R2 - chr2R_6_10005001 chr2R_10005001 D9 816 chr2R 10005828 10005884 chr2R 10007018 10007036 1360 19 1186 3.5 9.0 6.2 2.6 1208 chr2R 10005828 intron Pka-R2 - chr2R 10006432 intron Pka-R2 - chr2R 10007036 intron Pka-R2 - chr2R_19_10005001 chr2R_10005001 D9 817 chr2R 10008553 10008600 chr2R 10008656 10008713 9 109 0.0 0.0 0.0 9.0 160 chr2R 10008553 intron Pka-R2 - chr2R 10008633 intron Pka-R2 - chr2R 10008713 intron Pka-R2 - chr2R_9_10005001 chr2R_10005001 D9 818 chr2R 10132165 10132187 chr2R 10132270 10132292 10 105 8.5 4.5 6.5 1.3 127 chr2R 10132165 intron gem + chr2R 10132228 intron gem + chr2R 10132292 intron gem + chr2R_10_10130001 chr2R_10130001 D9 819 chr2R 10167086 10167132 chr2R 10167187 10167232 30 100 9.5 14.0 11.8 2.3 146 chr2R 10167086 intron KCNQ - chr2R 10167159 intron KCNQ - chr2R 10167232 intron KCNQ - chr2R_30_10165001 chr2R_10165001 D9 820 chr2R 10171086 10171142 chr2R 10171195 10171251 7 109 0.5 5.0 2.8 1.8 165 chr2R 10171086 intron KCNQ - chr2R 10171168 intron KCNQ - chr2R 10171251 intron KCNQ - chr2R_7_10170001 chr2R_10170001 D9 821 chr2R 10172622 10172644 chr2R 10172758 10172781 5 136 3.0 0.0 1.5 2.0 159 chr2R 10172622 intron KCNQ - chr2R 10172702 intron KCNQ - chr2R 10172781 intron KCNQ - chr2R_5_10170001 chr2R_10170001 D9 822 chr2R 10176096 10176150 chr2R 10176200 10176254 14 104 6.5 8.0 7.2 1.7 158 chr2R 10176096 intron KCNQ - chr2R 10176175 intron KCNQ - chr2R 10176254 intron KCNQ - chr2R_14_10175001 chr2R_10175001 D9 823 chr2R 10176861 10176912 chr2R 10186053 10186104 roo 7 9192 2.0 3.0 2.5 2.0 9243 chr2R 10176861 intron KCNQ - chr2R 10181482 intron KCNQ - chr2R 10186104 intron KCNQ - chr2R_7_10180001 chr2R_10180001 D9 824 chr2R 10216165 10216217 chr2R 10216268 10216320 7 102 1.5 3.0 2.2 2.2 155 chr2R 10216165 intron,intron CG12912 -,Hr46 - chr2R 10216242 intron,intron CG12912 -,Hr46 - chr2R 10216320 intron,intron CG12912 -,Hr46 - chr2R_7_10215001 chr2R_10215001 D9 825 chr2R 10225708 10225751 chr2R 10225815 10225857 10 107 5.5 2.5 4.0 2.0 149 chr2R 10225708 intron,intron CG12912 -,Hr46 - chr2R 10225782 intron,intron CG12912 -,Hr46 - chr2R 10225857 intron,intron CG12912 -,Hr46 - chr2R_10_10225001 chr2R_10225001 D9 826 chr2R 10234961 10234971 chr2R 10235075 10235085 5 113 8.5 0.0 4.2 1.0 124 chr2R 10234961 intron Hr46 - chr2R 10235023 intron Hr46 - chr2R 10235085 intron Hr46 - chr2R_5_10235001 chr2R_10235001 D9 827 chr2R 10266472 10266508 chr2R 10266586 10266623 14 112 11.5 9.0 10.2 1.2 151 chr2R 10266472 intron CG12910 + chr2R 10266548 intron CG12910 + chr2R 10266623 intron CG12910 + chr2R_14_10265001 chr2R_10265001 D9 828 chr2R 10266510 10266524 chr2R 10266585 10266640 9 104 8.0 8.0 8.0 1.0 130 chr2R 10266510 intron CG12910 + chr2R 10266575 intron CG12910 + chr2R 10266640 intron CG12910 + chr2R_9_10265001 chr2R_10265001 D9 829 chr2R 10274796 10274828 chr2R 10274897 10274927 6 100 3.0 0.0 1.5 2.4 131 chr2R 10274796 intron CAP + chr2R 10274862 intron CAP + chr2R 10274927 intron CAP + chr2R_6_10270001 chr2R_10270001 D9 830 chr2R 10313291 10313347 chr2R 10313404 10313460 10 113 2.0 5.0 3.5 2.2 169 chr2R 10313291 intergenic not near genes chr2R 10313376 intergenic not near genes chr2R 10313460 intergenic Ndg + chr2R_10_10310001 chr2R_10310001 D9 831 chr2R 10322062 10322080 chr2R 10322169 10322187 4 107 1.5 3.0 2.2 1.2 125 chr2R 10322062 3` UTR Ndg + chr2R 10322124 intergenic Ndg + chr2R 10322187 intergenic Ndg + chr2R_4_10320001 chr2R_10320001 D9 832 chr2R 10352651 10352704 chr2R 10352753 10352806 10 102 2.0 0.0 1.0 5.0 155 chr2R 10352651 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352728 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352806 intron,exon,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R_10_10350001 chr2R_10350001 D9 833 chr2R 10363840 10363894 chr2R 10363944 10363998 10 104 1.5 2.5 2.0 3.3 158 chr2R 10363840 intron CG42732 - chr2R 10363919 intron CG42732 - chr2R 10363998 intron CG42732 - chr2R_10_10360001 chr2R_10360001 D9 834 chr2R 10374773 10374794 chr2R 10374877 10374898 10 103 0.0 7.0 3.5 2.2 125 chr2R 10374773 intron CG42732 - chr2R 10374836 intron CG42732 - chr2R 10374898 intron CG42732 - chr2R_10_10370001 chr2R_10370001 D9 835 chr2R 10376715 10376867 chr2R 10376867 10377014 6 149 0.0 0.0 0.0 6.0 299 chr2R 10376715 intron CG42732 - chr2R 10376864 intron CG42732 - chr2R 10377014 intron CG42732 - chr2R_6_10375001 chr2R_10375001 D9 836 chr2R 10387979 10387999 chr2R 10388101 10388121 5 122 0.0 16.0 8.0 0.6 142 chr2R 10387979 intron CG42732 - chr2R 10388050 intron CG42732 - chr2R 10388121 intron CG42732 - chr2R_5_10385001 chr2R_10385001 D9 837 chr2R 10411780 10411826 chr2R 10411887 10411933 6 107 3.0 2.0 2.5 1.7 153 chr2R 10411780 intron CG42732 - chr2R 10411856 intron CG42732 - chr2R 10411933 intron CG42732 - chr2R_6_10410001 chr2R_10410001 D9 838 chr2R 10417958 10417965 chr2R 10418087 10418089 6 130 0.0 13.0 6.5 0.8 131 chr2R 10417958 intergenic not near genes chr2R 10418024 intergenic not near genes chr2R 10418089 intergenic not near genes chr2R_6_10415001 chr2R_10415001 D9 839 chr2R 10429004 10429040 chr2R 10429106 10429142 5 102 2.0 3.0 2.5 1.4 138 chr2R 10429004 intergenic not near genes chr2R 10429073 intergenic not near genes chr2R 10429142 intergenic not near genes chr2R_5_10425001 chr2R_10425001 D9 840 chr2R 10558219 10558234 chr2R 10558320 10558335 6 101 15.0 13.5 14.2 0.4 116 chr2R 10558219 5` UTR psq + chr2R 10558277 5` UTR psq + chr2R 10558335 5` UTR psq + chr2R_6_10555001 chr2R_10555001 D9 841 chr2R 10571986 10572029 chr2R 10572201 10572244 4 216 12.5 19.0 15.8 0.2 258 chr2R 10571986 intron psq + chr2R 10572115 intron psq + chr2R 10572244 intron psq + chr2R_4_10570001 chr2R_10570001 D9 842 chr2R 10585574 10585585 chr2R 10594181 10594193 Tirant 5 8607 4.0 16.0 10.0 0.5 8619 chr2R 10585574 intron psq + chr2R 10589884 intron psq + chr2R 10594193 intron psq + chr2R_5_10585001 chr2R_10585001 D9 843 chr2R 10622329 10622337 chr2R 10637117 10637127 mdg1 4 14789 2.5 2.0 2.2 1.2 14798 chr2R 10622329 intron CG11883 + chr2R 10629728 intron CG11883 + chr2R 10637127 intron CG11883 + chr2R_4_10625001 chr2R_10625001 D9 844 chr2R 10644038 10644083 chr2R 10644141 10644186 12 103 10.5 6.5 8.5 1.3 148 chr2R 10644038 intron Git - chr2R 10644112 intron Git - chr2R 10644186 intron Git - chr2R_12_10640001 chr2R_10640001 D9 845 chr2R 10653185 10653226 chr2R 10653289 10653330 8 104 5.5 6.0 5.8 1.2 145 chr2R 10653185 intergenic not near genes chr2R 10653258 intergenic not near genes chr2R 10653330 intergenic not near genes chr2R_8_10650001 chr2R_10650001 D9 846 chr2R 10781398 10781421 chr2R 10781757 10781804 5 376 7.5 4.5 6.0 0.7 406 chr2R 10781398 intron CG33144 - chr2R 10781601 intron CG33144 - chr2R 10781804 intron CG33144 - chr2R_5_10780001 chr2R_10780001 D9 847 chr2R 10785850 10785895 chr2R 10785953 10785999 9 103 20.5 22.5 21.5 0.4 149 chr2R 10785850 intron,3` UTR CG33144 -,CR44300 - chr2R 10785924 intron,3` UTR CG33144 -,CR44300 - chr2R 10785999 intron,3` UTR CG33144 -,CR44300 - chr2R_9_10785001 chr2R_10785001 D9 848 chr2R 10790129 10790177 chr2R 10790242 10790290 11 113 6.0 8.0 7.0 1.4 161 chr2R 10790129 intron CG33144 - chr2R 10790210 intron CG33144 - chr2R 10790290 intron CG33144 - chr2R_11_10790001 chr2R_10790001 D9 849 chr2R 10827307 10827356 chr2R 10827420 10827469 8 113 8.0 9.0 8.5 0.8 162 chr2R 10827307 exon CG12325 + chr2R 10827388 3` UTR CG12325 + chr2R 10827469 3` UTR,3` UTR CG12325 +,CG12344 - chr2R_8_10825001 chr2R_10825001 D9 850 chr2R 10860578 10860589 chr2R 10860677 10860690 4 100 1.5 4.0 2.8 1.1 112 chr2R 10860578 intron CG30015 - chr2R 10860634 intron CG30015 - chr2R 10860690 intron CG30015 - chr2R_4_10860001 chr2R_10860001 D9 851 chr2R 10948022 10948057 chr2R 10955598 10955633 17.6 8 7576 3.5 18.5 11.0 0.7 7611 chr2R 10948022 intergenic not near genes chr2R 10951828 intergenic not near genes chr2R 10955633 intergenic not near genes chr2R_8_10950001 chr2R_10950001 D9 852 chr2R 10959067 10959101 chr2R 10959171 10959205 8 104 2.0 6.0 4.0 1.6 138 chr2R 10959067 intergenic not near genes chr2R 10959136 intergenic not near genes chr2R 10959205 intergenic not near genes chr2R_8_10955001 chr2R_10955001 D9 853 chr2R 10967227 10967286 chr2R 10967407 10967465 6 179 2.5 0.0 1.2 2.7 238 chr2R 10967227 intergenic not near genes chr2R 10967346 intergenic not near genes chr2R 10967465 intergenic not near genes chr2R_6_10965001 chr2R_10965001 D9 854 chr2R 10979652 10979686 chr2R 10980147 10980179 297 4 494 0.5 5.5 3.0 1.0 527 chr2R 10979652 intergenic not near genes chr2R 10979916 intergenic not near genes chr2R 10980179 intergenic not near genes chr2R_4_10975001 chr2R_10975001 D9 855 chr2R 11009790 11009848 chr2R 11018986 11019045 roo 10 9198 2.5 2.0 2.2 3.1 9255 chr2R 11009790 intron luna - chr2R 11014418 intron luna - chr2R 11019045 intron luna - chr2R_10_11010001 chr2R_11010001 D9 856 chr2R 11019861 11019905 chr2R 11024950 11024996 jockey 22 5090 8.0 6.5 7.2 2.7 5135 chr2R 11019861 intron luna - chr2R 11022428 intron luna - chr2R 11024996 intron luna - chr2R_22_11020001 chr2R_11020001 D9 857 chr2R 11110401 11110413 chr2R 11110502 11110514 5 101 1.0 3.0 2.0 1.7 113 chr2R 11110401 intron luna - chr2R 11110458 intron luna - chr2R 11110514 intron luna - chr2R_5_11110001 chr2R_11110001 D9 858 chr2R 11134092 11134142 chr2R 11134358 11134407 pogo 8 266 1.5 2.5 2.0 2.7 315 chr2R 11134092 intergenic not near genes chr2R 11134250 intergenic not near genes chr2R 11134407 intergenic not near genes chr2R_8_11130001 chr2R_11130001 D9 859 chr2R 11179253 11179285 chr2R 11179364 11179395 12 111 0.0 7.0 3.5 2.7 142 chr2R 11179253 intron shn + chr2R 11179324 intron shn + chr2R 11179395 intron shn + chr2R_12_11175001 chr2R_11175001 D9 860 chr2R 11207794 11207843 chr2R 11208011 11208060 BS 21 217 4.5 6.5 5.5 3.2 266 chr2R 11207794 intron shn + chr2R 11207927 intron shn + chr2R 11208060 intron shn + chr2R_21_11205001 chr2R_11205001 D9 861 chr2R 11253213 11253261 chr2R 11253311 11253362 24 101 10.0 10.5 10.2 2.1 149 chr2R 11253213 intron Cpr47Ea - chr2R 11253288 intron Cpr47Ea - chr2R 11253362 5` UTR Cpr47Ea - chr2R_24_11250001 chr2R_11250001 D9 862 chr2R 11262173 11262222 chr2R 11262286 11262335 36 112 6.0 11.5 8.8 3.7 162 chr2R 11262173 intergenic Cpr47Ed - chr2R 11262254 intergenic Cpr47Ed - chr2R 11262335 intergenic not near genes chr2R_36_11260001 chr2R_11260001 D9 863 chr2R 11276780 11276809 chr2R 11276973 11277002 12 192 3.0 4.0 3.5 2.7 222 chr2R 11276780 intergenic not near genes chr2R 11276891 intergenic not near genes chr2R 11277002 intergenic not near genes chr2R_12_11275001 chr2R_11275001 D9 864 chr2R 11297621 11297649 chr2R 11301967 11301995 flea 6 4346 1.5 0.0 0.8 3.3 4374 chr2R 11297621 intergenic CG42336 - chr2R 11299808 intergenic not near genes chr2R 11301995 5` UTR CG7741 + chr2R_6_11295001 chr2R_11295001 D9 865 chr2R 11415491 11415545 chr2R 11418665 11418719 opus 11 3173 2.0 2.0 2.0 3.7 3228 chr2R 11415491 intron Drip - chr2R 11417105 intron Drip - chr2R 11418719 intron Drip - chr2R_11_11415001 chr2R_11415001 D9 866 chr2R 11472624 11472679 chr2R 11473846 11473901 pogo 18 1222 5.0 3.0 4.0 3.6 1277 chr2R 11472624 intergenic not near genes chr2R 11473262 intergenic not near genes chr2R 11473901 intergenic not near genes chr2R_18_11470001 chr2R_11470001 D9 867 chr2R 11494291 11494330 chr2R 11494399 11494438 4 108 2.0 2.5 2.2 1.2 147 chr2R 11494291 intron inv + chr2R 11494364 intron inv + chr2R 11494438 intron inv + chr2R_4_11490001 chr2R_11490001 D9 868 chr2R 11555370 11555419 chr2R 11555730 11555779 4 360 4.0 5.5 4.8 0.7 409 chr2R 11555370 intergenic not near genes chr2R 11555574 intergenic not near genes chr2R 11555779 intergenic not near genes chr2R_4_11555001 chr2R_11555001 D9 869 chr2R 11631374 11631409 chr2R 11631479 11631514 7 105 0.0 3.0 1.5 2.8 140 chr2R 11631374 intron CG9005 - chr2R 11631444 intron CG9005 - chr2R 11631514 intron CG9005 - chr2R_7_11630001 chr2R_11630001 D9 870 chr2R 11660344 11660395 chr2R 11660486 11660537 14 142 0.0 4.5 2.2 4.4 193 chr2R 11660344 intron Roc2 - chr2R 11660440 intron Roc2 - chr2R 11660537 intron Roc2 - chr2R_14_11660001 chr2R_11660001 D9 871 chr2R 11672838 11672846 chr2R 11672948 11672956 6 111 6.5 9.5 8.0 0.7 118 chr2R 11672838 intron,exon Roc2 -,Tret1-1 + chr2R 11672897 intron,intron Roc2 -,Tret1-1 + chr2R 11672956 intron,intron Roc2 -,Tret1-1 + chr2R_6_11670001 chr2R_11670001 D9 872 chr2R 11787421 11787469 chr2R 11787532 11787580 11 111 7.0 3.0 5.0 1.8 159 chr2R 11787421 intron ths + chr2R 11787500 intron ths + chr2R 11787580 intron ths + chr2R_11_11785001 chr2R_11785001 D9 873 chr2R 11792982 11793026 chr2R 11793092 11793148 4 113 5.0 0.0 2.5 1.1 166 chr2R 11792982 intron ths + chr2R 11793065 intron ths + chr2R 11793148 intron ths + chr2R_4_11790001 chr2R_11790001 D9 874 chr2R 11830779 11830818 chr2R 11830889 11830926 24 109 5.5 10.5 8.0 2.7 147 chr2R 11830779 intron Sobp - chr2R 11830852 intron Sobp - chr2R 11830926 intron Sobp - chr2R_24_11830001 chr2R_11830001 D9 875 chr2R 11861970 11862022 chr2R 11862080 11862132 9 110 1.5 2.0 1.8 3.2 162 chr2R 11861970 3` UTR CG34230 + chr2R 11862051 intergenic CG34230 +,TwdlBeta - chr2R 11862132 intergenic CG34230 +,TwdlBeta - chr2R_9_11860001 chr2R_11860001 D9 876 chr2R 11951384 11951421 chr2R 11951619 11951657 8 236 1.0 6.0 3.5 1.8 273 chr2R 11951384 intron CG13188 + chr2R 11951520 intron CG13188 + chr2R 11951657 intron CG13188 + chr2R_8_11950001 chr2R_11950001 D9 877 chr2R 12016784 12016829 chr2R 12016892 12016935 9 108 5.0 1.5 3.2 2.1 151 chr2R 12016784 intron otk - chr2R 12016860 intron otk - chr2R 12016935 intron otk - chr2R_9_12015001 chr2R_12015001 D9 878 chr2R 8518782 8518804 chr2R 12066151 12066173 8 3547370 8.0 22.5 15.2 0.5 3547391 chr2R 8518782 intron mtt - chr2R 10292478 intron CAP + chr2R 12066173 intron CG8888 - chr2R_8_10290001 chr2R_10290001 D9 879 chr2R 12139920 12139974 chr2R 12140030 12140087 25 113 5.0 4.0 4.5 4.5 167 chr2R 12139920 exon skpB - chr2R 12140004 5` UTR skpB - chr2R 12140087 5` UTR skpB - chr2R_25_12140001 chr2R_12140001 D9 880 chr2R 12200946 12200992 chr2R 12201100 12201146 9 154 3.0 4.0 3.5 2.0 200 chr2R 12200946 intergenic RpS11 - chr2R 12201046 intergenic RpS11 - chr2R 12201146 intergenic RpS11 - chr2R_9_12200001 chr2R_12200001 D9 881 chr2R 12355755 12355810 chr2R 12355862 12355919 25 109 6.0 3.5 4.8 4.3 164 chr2R 12355755 intron CG30049 + chr2R 12355837 exon CG30049 + chr2R 12355919 exon CG30049 + chr2R_25_12355001 chr2R_12355001 D9 882 chr2R 12370982 12370990 chr2R 12371190 12371197 4 208 3.5 3.0 3.2 1.0 215 chr2R 12370982 intergenic CG33012 + chr2R 12371090 intergenic CG33012 + chr2R 12371197 intergenic CG33012 +,CG13160 + chr2R_4_12370001 chr2R_12370001 D9 883 chr2R 12481138 12481165 chr2R 12482965 12482993 roo 16 1828 9.5 13.5 11.5 1.3 1855 chr2R 12481138 exon Dh44-R2 + chr2R 12482066 intron Dh44-R2 + chr2R 12482993 intron Dh44-R2 + chr2R_16_12480001 chr2R_12480001 D9 884 chr2R 12501667 12501721 chr2R 12503854 12503904 Rt1c 18 2185 6.5 8.0 7.2 2.2 2237 chr2R 12501667 intron fdl - chr2R 12502786 intron fdl - chr2R 12503904 intron fdl - chr2R_18_12500001 chr2R_12500001 D9 885 chr2R 12540450 12540497 chr2R 12540558 12540605 29 107 6.0 9.0 7.5 3.4 155 chr2R 12540450 intron fra + chr2R 12540528 intron fra + chr2R 12540605 intron fra + chr2R_29_12540001 chr2R_12540001 D9 886 chr2R 12552520 12552567 chr2R 12552702 12552749 18 182 6.0 5.0 5.5 2.8 229 chr2R 12552520 intron fra + chr2R 12552634 intron fra + chr2R 12552749 intron fra + chr2R_18_12550001 chr2R_12550001 D9 887 chr2R 12553909 12553952 chr2R 12554010 12554053 6 101 0.5 0.5 0.5 4.0 144 chr2R 12553909 intron fra + chr2R 12553981 intron fra + chr2R 12554053 intron fra + chr2R_6_12550001 chr2R_12550001 D9 888 chr2R 12565131 12565172 chr2R 12565237 12565278 8 106 3.0 1.0 2.0 2.7 147 chr2R 12565131 intergenic CG33775 - chr2R 12565204 intergenic CG33775 - chr2R 12565278 intergenic CG33775 - chr2R_8_12565001 chr2R_12565001 D9 889 chr2R 12565559 12565597 chr2R 12565954 12565992 8 395 2.5 4.0 3.2 1.9 433 chr2R 12565559 intergenic not near genes chr2R 12565776 intergenic Cyp301a1 + chr2R 12565992 intergenic Cyp301a1 + chr2R_8_12565001 chr2R_12565001 D9 890 chr2R 12602785 12602836 chr2R 12602894 12602945 13 109 3.0 3.5 3.2 3.1 160 chr2R 12602785 intron Amph + chr2R 12602865 intron Amph + chr2R 12602945 intron Amph + chr2R_13_12600001 chr2R_12600001 D9 891 chr2R 12643774 12643809 chr2R 12643867 12643903 6 98 2.5 3.5 3.0 1.5 129 chr2R 12643774 intron CG8785 - chr2R 12643838 intron CG8785 - chr2R 12643903 exon CG8785 - chr2R_6_12640001 chr2R_12640001 D9 892 chr2R 12700786 12700845 chr2R 12700904 12700964 27 117 7.0 4.0 5.5 4.2 178 chr2R 12700786 3` UTR wuc + chr2R 12700875 intergenic wuc + chr2R 12700964 intergenic wuc + chr2R_27_12700001 chr2R_12700001 D9 893 chr2R 12707509 12707529 chr2R 12715900 12715920 roo 5 8391 3.0 3.0 3.0 1.2 8411 chr2R 12707509 intron CG42663 + chr2R 12711714 intron CG42663 + chr2R 12715920 intron CG42663 + chr2R_5_12710001 chr2R_12710001 D9 894 chr2R 12726306 12726350 chr2R 12726423 12726467 6 117 5.5 4.0 4.8 1.0 161 chr2R 12726306 intron CG42663 + chr2R 12726386 intron CG42663 + chr2R 12726467 intron CG42663 + chr2R_6_12725001 chr2R_12725001 D9 895 chr2R 12739137 12739145 chr2R 12739238 12739246 4 100 18.0 19.5 18.8 0.2 109 chr2R 12739137 intron CG42663 + chr2R 12739192 intron CG42663 + chr2R 12739246 intron CG42663 + chr2R_4_12735001 chr2R_12735001 D9 896 chr2R 12748762 12748796 chr2R 12748875 12748909 8 113 1.0 8.0 4.5 1.5 147 chr2R 12748762 intron CG42663 + chr2R 12748836 intron CG42663 + chr2R 12748909 intron CG42663 + chr2R_8_12745001 chr2R_12745001 D9 897 chr2R 12772695 12772722 chr2R 12772856 12772884 4 161 10.5 3.0 6.8 0.5 189 chr2R 12772695 intergenic not near genes chr2R 12772790 intergenic not near genes chr2R 12772884 intergenic not near genes chr2R_4_12770001 chr2R_12770001 D9 898 chr2R 12777797 12777823 chr2R 12777920 12777957 5 131 0.0 3.5 1.8 1.8 160 chr2R 12777797 5` UTR CR45266 + chr2R 12777877 5` UTR CR45266 + chr2R 12777957 5` UTR CR45266 + chr2R_5_12775001 chr2R_12775001 D9 899 chr2R 12789268 12789326 chr2R 12797656 12797712 roo 25 8387 3.0 2.0 2.5 7.1 8444 chr2R 12789268 intron,3` UTR sca +,CR45137 - chr2R 12793490 intron,intron sca +,CR45137 - chr2R 12797712 intron,3` UTR sca +,CR45137 - chr2R_25_12790001 chr2R_12790001 D9 900 chr2R 12819441 12819479 chr2R 12824531 12824567 jockey 4 5089 14.0 15.0 14.5 0.3 5126 chr2R 12819441 intergenic not near genes chr2R 12822004 intergenic not near genes chr2R 12824567 intergenic not near genes chr2R_4_12820001 chr2R_12820001 D9 901 chr2R 12988241 12988425 chr2R 12988378 12988552 14 132 0.0 0.0 0.0 14.0 311 chr2R 12988241 intergenic not near genes chr2R 12988396 intergenic not near genes chr2R 12988552 intergenic not near genes chr2R_14_12985001 chr2R_12985001 D9 902 chr2R 13089052 13089104 chr2R 13089209 13089263 21 158 5.5 5.5 5.5 3.2 211 chr2R 13089052 intergenic not near genes chr2R 13089158 intergenic not near genes chr2R 13089263 intergenic not near genes chr2R_21_13085001 chr2R_13085001 D9 903 chr2R 13136819 13136861 chr2R 13141642 13141684 Doc 19 4823 8.5 6.5 7.5 2.2 4865 chr2R 13136819 exon Cap-G + chr2R 13139252 intron Cap-G + chr2R 13141684 intron Cap-G + chr2R_19_13135001 chr2R_13135001 D9 904 chr2R 13194827 13194852 chr2R 13194949 13194964 15 117 11.5 13.5 12.5 1.1 137 chr2R 13194827 intergenic not near genes chr2R 13194896 intergenic not near genes chr2R 13194964 intergenic not near genes chr2R_15_13190001 chr2R_13190001 D9 905 chr2R 13309647 13309682 chr2R 13309790 13309825 13 143 2.5 4.5 3.5 2.9 178 chr2R 13309647 intergenic not near genes chr2R 13309736 intergenic not near genes chr2R 13309825 intergenic not near genes chr2R_13_13305001 chr2R_13305001 D9 906 chr2R 13403899 13403935 chr2R 13404009 13404045 12 110 8.0 1.0 4.5 2.2 146 chr2R 13403899 intergenic not near genes chr2R 13403972 intergenic not near genes chr2R 13404045 intergenic not near genes chr2R_12_13400001 chr2R_13400001 D9 907 chr2R 13431477 13431517 chr2R 13431578 13431621 18 103 3.5 2.5 3.0 4.5 144 chr2R 13431477 intron CG42321 - chr2R 13431549 intron CG42321 - chr2R 13431621 intron CG42321 - chr2R_18_13430001 chr2R_13430001 D9 908 chr2R 13475942 13475985 chr2R 13476050 13476094 10 110 0.5 1.0 0.8 5.6 152 chr2R 13475942 intron arr - chr2R 13476018 intron arr - chr2R 13476094 intron arr - chr2R_10_13475001 chr2R_13475001 D9 909 chr2R 13480121 13480146 chr2R 13480225 13480250 7 104 0.0 9.0 4.5 1.3 129 chr2R 13480121 intron arr - chr2R 13480186 intron arr - chr2R 13480250 intron arr - chr2R_7_13480001 chr2R_13480001 D9 910 chr2R 13547058 13547099 chr2R 13547278 13547319 9 220 2.5 2.5 2.5 2.6 261 chr2R 13547058 intron CG6145 - chr2R 13547188 intron CG6145 - chr2R 13547319 intron CG6145 - chr2R_9_13545001 chr2R_13545001 D9 911 chr2R 13554736 13554773 chr2R 13554846 13554883 10 110 0.0 5.0 2.5 2.9 147 chr2R 13554736 intron Roe1 + chr2R 13554810 intron Roe1 + chr2R 13554883 intron Roe1 + chr2R_10_13550001 chr2R_13550001 D9 912 chr2R 13566239 13566274 chr2R 13566342 13566379 8 104 4.5 0.0 2.2 2.5 140 chr2R 13566239 intergenic not near genes chr2R 13566309 intergenic not near genes chr2R 13566379 intergenic not near genes chr2R_8_13565001 chr2R_13565001 D9 913 chr2R 13580479 13580526 chr2R 13580850 13580900 jockey 17 374 4.5 7.5 6.0 2.4 421 chr2R 13580479 3` UTR CG6191 - chr2R 13580690 3` UTR,3` UTR CG6191 -,CG45088 - chr2R 13580900 3` UTR,3` UTR CG6191 -,CG45088 - chr2R_17_13580001 chr2R_13580001 D9 914 chr2R 13601508 13601540 chr2R 13601610 13601640 17 101 9.0 6.5 7.8 1.9 132 chr2R 13601508 intergenic CG43058 - chr2R 13601574 intergenic CG43058 - chr2R 13601640 intergenic not near genes chr2R_17_13600001 chr2R_13600001 D9 915 chr2R 13632303 13632312 chr2R 13632402 13632425 5 110 13.5 6.0 9.8 0.5 122 chr2R 13632303 intron fas + chr2R 13632364 intron fas + chr2R 13632425 intron fas + chr2R_5_13630001 chr2R_13630001 D9 916 chr2R 13709824 13709854 chr2R 13709942 13709972 5 118 4.5 7.0 5.8 0.7 148 chr2R 13709824 intron fas + chr2R 13709898 intron fas + chr2R 13709972 intron fas + chr2R_5_13705001 chr2R_13705001 D9 917 chr2R 13721181 13721227 chr2R 13721289 13721335 24 108 8.5 8.5 8.5 2.5 154 chr2R 13721181 intron fas + chr2R 13721258 intron fas + chr2R 13721335 intron fas + chr2R_24_13720001 chr2R_13720001 D9 918 chr2R 13727828 13727848 chr2R 13727939 13727952 5 109 4.5 12.0 8.2 0.5 124 chr2R 13727828 intron fas + chr2R 13727890 intron fas + chr2R 13727952 intron fas + chr2R_5_13725001 chr2R_13725001 D9 919 chr2R 13728117 13728160 chr2R 13735799 13735839 opus 16 7682 2.0 4.5 3.2 3.8 7722 chr2R 13728117 intron fas + chr2R 13731978 intron fas + chr2R 13735839 intron fas + chr2R_16_13730001 chr2R_13730001 D9 920 chr2R 13801455 13801510 chr2R 13801559 13801614 14 104 5.5 2.0 3.8 2.9 159 chr2R 13801455 intron Cpr50Cb + chr2R 13801534 intron Cpr50Cb + chr2R 13801614 intron Cpr50Cb + chr2R_14_13800001 chr2R_13800001 D9 921 chr2R 13861413 13861456 chr2R 13861518 13861560 7 105 7.0 5.5 6.2 1.0 147 chr2R 13861413 intron CG16935 - chr2R 13861486 intron CG16935 - chr2R 13861560 intron CG16935 - chr2R_7_13860001 chr2R_13860001 D9 922 chr2R 13868889 13868921 chr2R 13868993 13869024 13 104 1.0 1.0 1.0 6.5 135 chr2R 13868889 intron shot - chr2R 13868956 intron shot - chr2R 13869024 intron shot - chr2R_13_13865001 chr2R_13865001 D9 923 chr2R 13905585 13905629 chr2R 13907592 13907636 Rt1a 21 2006 10.5 10.0 10.2 1.9 2051 chr2R 13905585 intron shot - chr2R 13906610 intron shot - chr2R 13907636 intron shot - chr2R_21_13905001 chr2R_13905001 D9 924 chr2R 14168355 14168394 chr2R 14168469 14168508 4 114 0.5 3.0 1.8 1.4 153 chr2R 14168355 intergenic CG18327 +,CG18324 +,CR44368 - chr2R 14168432 intergenic CG18327 +,CG18324 +,CR44368 - chr2R 14168508 intergenic CG18327 +,CG18324 +,CR44368 - chr2R_4_14165001 chr2R_14165001 D9 925 chr2R 14277556 14277603 chr2R 14277663 14277710 10 107 4.5 3.0 3.8 2.1 154 chr2R 14277556 5` UTR Ih + chr2R 14277633 5` UTR Ih + chr2R 14277710 5` UTR Ih + chr2R_10_14275001 chr2R_14275001 D9 926 chr2R 14285019 14285049 chr2R 14285141 14285171 5 122 3.0 1.5 2.2 1.6 152 chr2R 14285019 intron Ih + chr2R 14285095 intron Ih + chr2R 14285171 intron Ih + chr2R_5_14285001 chr2R_14285001 D9 927 chr2R 14294810 14294858 chr2R 14294915 14294963 13 105 3.0 6.5 4.8 2.2 153 chr2R 14294810 intron Ih + chr2R 14294886 intron Ih + chr2R 14294963 intron Ih + chr2R_13_14290001 chr2R_14290001 D9 928 chr2R 14357542 14357571 chr2R 14357657 14357686 7 115 3.5 3.0 3.2 1.7 144 chr2R 14357542 intergenic CG8617 -,Arc1 - chr2R 14357614 intergenic Arc1 -,CG8617 - chr2R 14357686 intergenic Arc1 -,CG8617 - chr2R_7_14355001 chr2R_14355001 D9 929 chr2R 14467285 14467325 chr2R 14476466 14476505 roo 25 9182 2.5 6.5 4.5 4.5 9220 chr2R 14467285 intergenic not near genes chr2R 14471895 intergenic not near genes chr2R 14476505 5` UTR CR44462 + chr2R_25_14470001 chr2R_14470001 D9 930 chr2R 14497370 14497384 chr2R 14498558 14498572 1360 4 1188 1.0 4.5 2.8 1.1 1202 chr2R 14497370 3` UTR Cpsf160 - chr2R 14497971 intron Cpsf160 - chr2R 14498572 3` UTR Cpsf160 - chr2R_4_14495001 chr2R_14495001 D9 931 chr2R 14514464 14514499 chr2R 14514585 14514617 4 120 2.0 4.5 3.2 1.0 153 chr2R 14514464 intron,intron Cpr51A -,CG30197 + chr2R 14514540 intron,intron Cpr51A -,CG30197 + chr2R 14514617 intron,intron Cpr51A -,CG30197 + chr2R_4_14510001 chr2R_14510001 D9 932 chr2R 14524827 14524853 chr2R 14524949 14524975 11 122 10.0 2.0 6.0 1.6 148 chr2R 14524827 intergenic not near genes chr2R 14524901 intergenic not near genes chr2R 14524975 intergenic not near genes chr2R_11_14520001 chr2R_14520001 D9 933 chr2R 14530338 14530376 chr2R 14530452 14530490 11 114 6.0 6.0 6.0 1.6 152 chr2R 14530338 intron ttv + chr2R 14530414 intron ttv + chr2R 14530490 intron ttv + chr2R_11_14530001 chr2R_14530001 D9 934 chr2R 14530719 14530773 chr2R 14530826 14530880 22 107 5.5 7.0 6.2 3.1 161 chr2R 14530719 intron ttv + chr2R 14530800 intron ttv + chr2R 14530880 intron ttv + chr2R_22_14530001 chr2R_14530001 D9 935 chr2R 14722289 14722299 chr2R 14722418 14722425 5 128 8.0 14.5 11.2 0.4 136 chr2R 14722289 intergenic not near genes chr2R 14722357 intergenic not near genes chr2R 14722425 intergenic not near genes chr2R_5_14720001 chr2R_14720001 D9 936 chr2R 14729937 14729959 chr2R 14730046 14730068 6 109 4.0 3.5 3.8 1.2 131 chr2R 14729937 intergenic not near genes chr2R 14730002 intergenic not near genes chr2R 14730068 intergenic not near genes chr2R_6_14730001 chr2R_14730001 D9 937 chr2R 14780412 14780448 chr2R 14780573 14780609 15 161 8.5 5.0 6.8 1.9 197 chr2R 14780412 intron kn - chr2R 14780510 intron kn - chr2R 14780609 intron kn - chr2R_15_14780001 chr2R_14780001 D9 938 chr2R 14881231 14881269 chr2R 14881399 14881437 17 168 3.5 6.5 5.0 2.8 206 chr2R 14881231 exon Cyp6a9 - chr2R 14881334 5` UTR Cyp6a9 - chr2R 14881437 intergenic Cyp6a9 - chr2R_17_14880001 chr2R_14880001 D9 939 chr2R 14889194 14889210 chr2R 14897827 14897843 Max-element 6 8633 8.5 1.0 4.8 1.0 8649 chr2R 14889194 intergenic Cyp6a8 - chr2R 14893518 intergenic not near genes chr2R 14897843 intergenic not near genes chr2R_6_14890001 chr2R_14890001 D9 940 chr2R 14911679 14911727 chr2R 14911827 14911875 11 148 2.0 1.0 1.5 4.4 196 chr2R 14911679 intron CG10249 - chr2R 14911777 intron CG10249 - chr2R 14911875 intron CG10249 - chr2R_11_14910001 chr2R_14910001 D9 941 chr2R 14917822 14917883 chr2R 14917932 14917993 14 110 4.0 5.0 4.5 2.5 171 chr2R 14917822 intron CG10249 - chr2R 14917908 intron CG10249 - chr2R 14917993 intron CG10249 - chr2R_14_14915001 chr2R_14915001 D9 942 chr2R 14919136 14919177 chr2R 14919267 14919311 6 132 0.0 0.0 0.0 6.0 175 chr2R 14919136 intron CG10249 - chr2R 14919224 intron CG10249 - chr2R 14919311 intron CG10249 - chr2R_6_14915001 chr2R_14915001 D9 943 chr2R 14922120 14922155 chr2R 14922221 14922256 5 101 4.0 3.0 3.5 1.1 136 chr2R 14922120 intron CG10249 - chr2R 14922188 intron CG10249 - chr2R 14922256 intron CG10249 - chr2R_5_14920001 chr2R_14920001 D9 944 chr2R 14954721 14954785 chr2R 14954822 14954886 9 101 5.0 3.0 4.0 1.8 165 chr2R 14954721 intron aPKC - chr2R 14954804 intron aPKC - chr2R 14954886 intron aPKC - chr2R_9_14950001 chr2R_14950001 D9 945 chr2R 15004707 15004753 chr2R 15005061 15005107 jockey 12 353 8.5 3.0 5.8 1.8 400 chr2R 15004707 intergenic not near genes chr2R 15004907 intergenic not near genes chr2R 15005107 intergenic not near genes chr2R_12_15000001 chr2R_15000001 D9 946 chr2R 15015435 15015487 chr2R 15022884 15022936 mdg1 10 7449 5.5 5.5 5.5 1.5 7501 chr2R 15015435 intron hbs + chr2R 15019186 intron hbs + chr2R 15022936 intron hbs + chr2R_10_15015001 chr2R_15015001 D9 947 chr2R 15051058 15051108 chr2R 15051165 15051215 17 107 5.0 6.5 5.8 2.5 157 chr2R 15051058 intergenic not near genes chr2R 15051136 intergenic not near genes chr2R 15051215 intergenic not near genes chr2R_17_15050001 chr2R_15050001 D9 948 chr2R 15110642 15110691 chr2R 15110748 15110797 6 106 1.0 5.5 3.2 1.4 155 chr2R 15110642 intergenic not near genes chr2R 15110720 intergenic not near genes chr2R 15110797 intergenic not near genes chr2R_6_15110001 chr2R_15110001 D9 949 chr2R 15119312 15119349 chr2R 15127818 15127855 Tirant 18 8506 4.0 3.0 3.5 4.0 8543 chr2R 15119312 intron chn + chr2R 15123584 intron chn + chr2R 15127855 intron chn + chr2R_18_15120001 chr2R_15120001 D9 950 chr2R 15296138 15296171 chr2R 15296246 15296279 17 107 3.0 4.0 3.5 3.8 141 chr2R 15296138 intron Trpm - chr2R 15296208 intron Trpm - chr2R 15296279 intron Trpm - chr2R_17_15295001 chr2R_15295001 D9 951 chr2R 15330184 15330237 chr2R 15330343 15330396 11 159 2.0 5.5 3.8 2.3 212 chr2R 15330184 intergenic CR44371 - chr2R 15330290 intergenic CR44371 - chr2R 15330396 3` UTR CR44371 - chr2R_11_15330001 chr2R_15330001 D9 952 chr2R 15354996 15355049 chr2R 15355107 15355160 11 111 7.5 5.0 6.2 1.5 164 chr2R 15354996 intron unc-5 + chr2R 15355078 intron unc-5 + chr2R 15355160 intron unc-5 + chr2R_11_15355001 chr2R_15355001 D9 953 chr2R 15362628 15362645 chr2R 15362735 15362751 13 107 10.5 6.5 8.5 1.4 123 chr2R 15362628 intron unc-5 + chr2R 15362690 intron unc-5 + chr2R 15362751 intron unc-5 + chr2R_13_15360001 chr2R_15360001 D9 954 chr2R 15362647 15362670 chr2R 15362730 15362777 16 105 6.0 4.0 5.0 2.7 130 chr2R 15362647 intron unc-5 + chr2R 15362712 intron unc-5 + chr2R 15362777 intron unc-5 + chr2R_16_15360001 chr2R_15360001 D9 955 chr2R 15375050 15375071 chr2R 15375185 15375204 7 135 4.5 0.5 2.5 2.0 154 chr2R 15375050 intergenic not near genes chr2R 15375127 intergenic not near genes chr2R 15375204 intergenic not near genes chr2R_7_15375001 chr2R_15375001 D9 956 chr2R 15375343 15375358 chr2R 15376185 15376200 4 842 1.0 5.0 3.0 1.0 857 chr2R 15375343 intergenic not near genes chr2R 15375772 intergenic not near genes chr2R 15376200 intergenic dup - chr2R_4_15375001 chr2R_15375001 D9 957 chr2R 15404094 15404130 chr2R 15404215 15404215 26 120 8.0 8.0 8.0 2.9 121 chr2R 15404094 intron CG43729 + chr2R 15404154 intron CG43729 + chr2R 15404215 intron CG43729 + chr2R_26_15400001 chr2R_15400001 D9 958 chr2R 15606109 15606122 chr2R 15606208 15606224 7 101 7.0 1.0 4.0 1.4 115 chr2R 15606109 intergenic not near genes chr2R 15606166 intergenic not near genes chr2R 15606224 intergenic not near genes chr2R_7_15605001 chr2R_15605001 D9 959 chr2R 15645655 15645691 chr2R 15645776 15645776 15 118 5.5 0.0 2.8 3.9 121 chr2R 15645655 intron CG42524 + chr2R 15645716 intron CG42524 + chr2R 15645776 intron CG42524 + chr2R_15_15645001 chr2R_15645001 D9 960 chr2R 15794866 15794885 chr2R 15794981 15794982 5 111 0.0 0.0 0.0 5.0 116 chr2R 15794866 intron,5` UTR Zasp52 -,tun + chr2R 15794924 intron,5` UTR Zasp52 -,tun + chr2R 15794982 intron,intron Zasp52 -,tun + chr2R_5_15790001 chr2R_15790001 D9 961 chr2R 15828127 15828151 chr2R 15828312 15828336 4 185 0.0 4.5 2.2 1.2 209 chr2R 15828127 intron,intron tun +,Poxn - chr2R 15828232 intron,intron tun +,Poxn - chr2R 15828336 intron,intron tun +,Poxn - chr2R_4_15825001 chr2R_15825001 D9 962 chr2R 15833500 15833549 chr2R 15833612 15833659 23 111 6.0 8.5 7.2 2.8 159 chr2R 15833500 intron,intron tun +,Poxn - chr2R 15833580 intron,intron tun +,Poxn - chr2R 15833659 intron,intron tun +,Poxn - chr2R_23_15830001 chr2R_15830001 D9 963 chr2R 15930356 15930363 chr2R 15930458 15930465 6 102 26.0 2.0 14.0 0.4 109 chr2R 15930356 intron bdg - chr2R 15930410 intron bdg - chr2R 15930465 intron bdg - chr2R_6_15930001 chr2R_15930001 D9 964 chr2R 16037204 16037228 chr2R 16037306 16037330 15 101 12.0 14.0 13.0 1.1 126 chr2R 16037204 intron SP2353 + chr2R 16037267 intron SP2353 + chr2R 16037330 intron SP2353 + chr2R_15_16035001 chr2R_16035001 D9 965 chr2R 16054927 16054960 chr2R 16055033 16055068 19 107 14.0 9.0 11.5 1.5 141 chr2R 16054927 intron CG8405 + chr2R 16054998 intron CG8405 + chr2R 16055068 intron CG8405 + chr2R_19_16050001 chr2R_16050001 D9 966 chr2R 16061705 16061715 chr2R 16064362 16064375 Burdock 9 2659 5.5 8.5 7.0 1.1 2670 chr2R 16061705 intergenic not near genes chr2R 16063040 intergenic not near genes chr2R 16064375 intergenic not near genes chr2R_9_16060001 chr2R_16060001 D9 967 chr2R 16119865 16119920 chr2R 16120014 16120069 30 149 6.0 9.0 7.5 3.5 204 chr2R 16119865 5` UTR Jhe + chr2R 16119967 intron Jhe + chr2R 16120069 intron Jhe + chr2R_30_16115001 chr2R_16115001 D9 968 chr2R 16220685 16220735 chr2R 16220788 16220840 17 104 1.0 6.5 3.8 3.5 155 chr2R 16220685 intron mrj - chr2R 16220762 intron mrj - chr2R 16220840 intron mrj - chr2R_17_16220001 chr2R_16220001 D9 969 chr2R 16245391 16245428 chr2R 16245510 16245547 13 119 4.0 5.5 4.8 2.2 156 chr2R 16245391 intron CngA - chr2R 16245469 intron CngA - chr2R 16245547 intron CngA - chr2R_13_16245001 chr2R_16245001 D9 970 chr2R 16279362 16279521 chr2R 16279472 16279683 6 137 0.0 0.0 0.0 6.0 321 chr2R 16279362 intergenic not near genes chr2R 16279522 intergenic CG15704 + chr2R 16279683 intergenic CG15704 + chr2R_6_16275001 chr2R_16275001 D9 971 chr2R 16352841 16352868 chr2R 16352949 16352976 5 108 5.5 2.0 3.8 1.0 135 chr2R 16352841 intergenic not near genes chr2R 16352908 intergenic not near genes chr2R 16352976 intergenic not near genes chr2R_5_16350001 chr2R_16350001 D9 972 chr2R 16449294 16449336 chr2R 16449566 16449608 16 272 5.5 3.0 4.2 3.1 314 chr2R 16449294 intergenic not near genes chr2R 16449451 intergenic not near genes chr2R 16449608 intergenic not near genes chr2R_16_16445001 chr2R_16445001 D9 973 chr2R 16460742 16460765 chr2R 16460849 16460867 4 106 1.5 8.5 5.0 0.7 125 chr2R 16460742 intergenic not near genes chr2R 16460804 intergenic not near genes chr2R 16460867 intergenic not near genes chr2R_4_16460001 chr2R_16460001 D9 974 chr2R 16482861 16482904 chr2R 16483131 16483174 15 269 3.0 5.5 4.2 2.9 313 chr2R 16482861 intergenic not near genes chr2R 16483018 intergenic not near genes chr2R 16483174 intergenic not near genes chr2R_15_16480001 chr2R_16480001 D9 975 chr2R 16518019 16518069 chr2R 16518120 16518168 11 100 3.0 3.5 3.2 2.6 149 chr2R 16518019 intron Sema-2a + chr2R 16518094 intron Sema-2a + chr2R 16518168 intron Sema-2a + chr2R_11_16515001 chr2R_16515001 D9 976 chr2R 16539626 16539659 chr2R 16544860 16544893 copia 4 5234 4.5 3.5 4.0 0.8 5267 chr2R 16539626 intergenic not near genes chr2R 16542260 intergenic not near genes chr2R 16544893 intergenic not near genes chr2R_4_16540001 chr2R_16540001 D9 977 chr2R 16599266 16599322 chr2R 16599371 16599427 33 104 13.0 6.0 9.5 3.1 161 chr2R 16599266 intron,exon CG8303 -,CG5089 + chr2R 16599346 intron,exon CG8303 -,CG5089 + chr2R 16599427 intron,exon CG8303 -,CG5089 + chr2R_33_16595001 chr2R_16595001 D9 978 chr2R 16882701 16882747 chr2R 16882850 16882896 15 149 7.0 3.5 5.2 2.4 195 chr2R 16882701 intron,intron CG8910 -,CG6472 + chr2R 16882798 intron,intron CG8910 -,CG6472 + chr2R 16882896 intron,intron CG8910 -,CG6472 + chr2R_15_16880001 chr2R_16880001 D9 979 chr2R 17147219 17147265 chr2R 17152275 17152321 jockey 8 5056 2.5 13.0 7.8 0.9 5102 chr2R 17147219 intergenic not near genes chr2R 17149770 intergenic not near genes chr2R 17152321 intergenic not near genes chr2R_8_17145001 chr2R_17145001 D9 980 chr2R 17161144 17161199 chr2R 17161254 17161309 9 110 5.5 6.5 6.0 1.3 165 chr2R 17161144 intergenic CG30457 - chr2R 17161226 intergenic CG30457 - chr2R 17161309 intergenic CG30457 - chr2R_9_17160001 chr2R_17160001 D9 981 chr2R 17165983 17165994 chr2R 17166103 17166114 6 120 23.5 34.0 28.8 0.2 131 chr2R 17165983 exon CG10953 - chr2R 17166048 exon CG10953 - chr2R 17166114 exon CG10953 - chr2R_6_17165001 chr2R_17165001 D9 982 chr2R 17236492 17236534 chr2R 17241721 17241763 copia 7 5229 6.0 5.5 5.8 1.0 5271 chr2R 17236492 intron mbl + chr2R 17239128 intron mbl + chr2R 17241763 intron mbl + chr2R_7_17235001 chr2R_17235001 D9 983 chr2R 17389051 17389073 chr2R 17389165 17389187 6 114 4.5 10.0 7.2 0.7 136 chr2R 17389051 3` UTR CR44344 - chr2R 17389119 intergenic CR44344 - chr2R 17389187 intergenic CR44344 - chr2R_6_17385001 chr2R_17385001 D9 984 chr2R 17485891 17485940 chr2R 17490686 17490732 F-element 5 4794 7.5 3.5 5.5 0.8 4841 chr2R 17485891 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17488312 intron NT5E-2 + chr2R 17490732 intron NT5E-2 + chr2R_5_17485001 chr2R_17485001 D9 985 chr2R 17918143 17918179 chr2R 17918245 17918280 12 100 2.0 0.0 1.0 6.0 137 chr2R 17918143 intron Elk + chr2R 17918212 intron Elk + chr2R 17918280 intron Elk + chr2R_12_17915001 chr2R_17915001 D9 986 chr2R 17921417 17921460 chr2R 17921523 17921566 7 107 1.0 3.5 2.2 2.2 149 chr2R 17921417 intron Elk + chr2R 17921492 intron Elk + chr2R 17921566 intron Elk + chr2R_7_17920001 chr2R_17920001 D9 987 chr2R 17966124 17966175 chr2R 17966230 17966278 21 106 8.5 7.0 7.8 2.4 154 chr2R 17966124 intergenic not near genes chr2R 17966201 intergenic not near genes chr2R 17966278 intergenic not near genes chr2R_21_17965001 chr2R_17965001 D9 988 chr2R 17968582 17968628 chr2R 17968711 17968757 8 128 17.0 15.0 16.0 0.5 175 chr2R 17968582 intergenic not near genes chr2R 17968670 intergenic not near genes chr2R 17968757 intergenic not near genes chr2R_8_17965001 chr2R_17965001 D9 989 chr2R 17971098 17971128 chr2R 17971202 17971232 12 104 19.5 22.5 21.0 0.5 134 chr2R 17971098 intergenic not near genes chr2R 17971165 intergenic not near genes chr2R 17971232 intergenic not near genes chr2R_12_17970001 chr2R_17970001 D9 990 chr2R 17974511 17974563 chr2R 17974664 17974716 11 153 14.5 12.0 13.2 0.8 205 chr2R 17974511 intergenic not near genes chr2R 17974614 intergenic not near genes chr2R 17974716 intergenic dpr13 - chr2R_11_17970001 chr2R_17970001 D9 991 chr2R 17982900 17982935 chr2R 17983008 17983045 6 110 4.0 3.5 3.8 1.2 145 chr2R 17982900 intron dpr13 - chr2R 17982972 intron dpr13 - chr2R 17983045 intron dpr13 - chr2R_6_17980001 chr2R_17980001 D9 992 chr2R 17993917 17993925 chr2R 17994041 17994049 4 124 9.0 4.5 6.8 0.5 132 chr2R 17993917 intron dpr13 - chr2R 17993983 intron dpr13 - chr2R 17994049 intron dpr13 - chr2R_4_17990001 chr2R_17990001 D9 993 chr2R 17995325 17995371 chr2R 17995428 17995474 7 103 10.5 14.0 12.2 0.5 149 chr2R 17995325 intron dpr13 - chr2R 17995400 intron dpr13 - chr2R 17995474 intron dpr13 - chr2R_7_17995001 chr2R_17995001 D9 994 chr2R 18021546 18021569 chr2R 18021978 18022031 4 440 2.5 2.5 2.5 1.1 485 chr2R 18021546 exon CG10910 + chr2R 18021788 exon CG10910 + chr2R 18022031 exon CG10910 + chr2R_4_18020001 chr2R_18020001 D9 995 chr2R 18042799 18042989 chr2R 18042941 18043107 4 129 0.0 0.0 0.0 4.0 308 chr2R 18042799 3` UTR CG5773 - chr2R 18042953 3` UTR CG5773 - chr2R 18043107 3` UTR CG5773 - chr2R_4_18040001 chr2R_18040001 D9 996 chr2R 18111668 18111710 chr2R 18115561 18115603 F-element 6 3892 3.5 3.0 3.2 1.4 3935 chr2R 18111668 intergenic not near genes chr2R 18113636 intergenic not near genes chr2R 18115603 intergenic not near genes chr2R_6_18110001 chr2R_18110001 D9 997 chr2R 18124314 18124369 chr2R 18124416 18124471 10 102 2.0 2.0 2.0 3.3 157 chr2R 18124314 intron stau - chr2R 18124392 intron stau - chr2R 18124471 intron stau - chr2R_10_18120001 chr2R_18120001 D9 998 chr2R 18144825 18144875 chr2R 18144971 18145022 14 142 50.5 41.0 45.8 0.3 197 chr2R 18144825 exon pAbp + chr2R 18144924 intron pAbp + chr2R 18145022 exon pAbp + chr2R_14_18140001 chr2R_18140001 D9 999 chr2R 18145197 18145242 chr2R 18145342 18145384 7 145 28.0 18.5 23.2 0.3 187 chr2R 18145197 exon pAbp + chr2R 18145290 intron pAbp + chr2R 18145384 3` UTR pAbp + chr2R_7_18145001 chr2R_18145001 D9 1000 chr2R 18195179 18195218 chr2R 18195292 18195331 9 112 4.5 7.0 5.8 1.3 152 chr2R 18195179 intergenic not near genes chr2R 18195255 intergenic not near genes chr2R 18195331 intergenic not near genes chr2R_9_18195001 chr2R_18195001 D9 1001 chr2R 18207293 18207343 chr2R 18207405 18207456 16 112 6.5 5.0 5.8 2.4 163 chr2R 18207293 intergenic CG30114 + chr2R 18207374 intergenic CG30114 + chr2R 18207456 intergenic CG30114 + chr2R_16_18205001 chr2R_18205001 D9 1002 chr2R 18260857 18260869 chr2R 18261027 18261038 7 170 5.0 0.0 2.5 2.0 181 chr2R 18260857 intergenic not near genes chr2R 18260948 intergenic not near genes chr2R 18261038 intergenic not near genes chr2R_7_18260001 chr2R_18260001 D9 1003 chr2R 18289402 18289454 chr2R 18289529 18289577 11 126 4.5 10.5 7.5 1.3 175 chr2R 18289402 intron,intron sbb -,CG14502 + chr2R 18289490 intron,intron sbb -,CG14502 + chr2R 18289577 exon,intron sbb -,CG14502 + chr2R_11_18285001 chr2R_18285001 D9 1004 chr2R 18358373 18358418 chr2R 18372610 18372654 roo 6 14236 0.5 1.5 1.0 3.0 14281 chr2R 18358373 intergenic not near genes chr2R 18365514 intergenic not near genes chr2R 18372654 intergenic not near genes chr2R_6_18365001 chr2R_18365001 D9 1005 chr2R 18398153 18398180 chr2R 18398270 18398299 4 118 1.0 2.0 1.5 1.6 146 chr2R 18398153 intron GstE10 - chr2R 18398226 intron GstE10 - chr2R 18398299 intron GstE10 - chr2R_4_18395001 chr2R_18395001 D9 1006 chr2R 18471892 18471928 chr2R 18471993 18472029 6 101 4.5 1.0 2.8 1.6 137 chr2R 18471892 intron CG30116 - chr2R 18471960 intron CG30116 - chr2R 18472029 intron CG30116 - chr2R_6_18470001 chr2R_18470001 D9 1007 chr2R 18477744 18477760 chr2R 18477845 18477867 4 106 0.0 8.0 4.0 0.8 123 chr2R 18477744 intron CG30116 - chr2R 18477806 intron CG30116 - chr2R 18477867 intron CG30116 - chr2R_4_18475001 chr2R_18475001 D9 1008 chr2R 18527772 18527804 chr2R 18527918 18527948 14 145 3.5 2.0 2.8 3.7 176 chr2R 18527772 exon CG10924 + chr2R 18527860 intron CG10924 + chr2R 18527948 intron CG10924 + chr2R_14_18525001 chr2R_18525001 D9 1009 chr2R 18528172 18528218 chr2R 18528282 18528325 9 109 3.0 5.0 4.0 1.8 153 chr2R 18528172 intron CG10924 + chr2R 18528248 intron CG10924 + chr2R 18528325 intron CG10924 + chr2R_9_18525001 chr2R_18525001 D9 1010 chr2R 18575773 18575827 chr2R 18581986 18582040 3S18 16 6205 5.0 7.0 6.0 2.3 6267 chr2R 18575773 intron GEFmeso - chr2R 18578906 intron GEFmeso - chr2R 18582040 intron GEFmeso - chr2R_16_18575001 chr2R_18575001 D9 1011 chr2R 18590844 18590896 chr2R 18600021 18600073 roo 21 9177 5.0 6.0 5.5 3.2 9229 chr2R 18590844 intron GEFmeso - chr2R 18595458 intron GEFmeso - chr2R 18600073 intron GEFmeso - chr2R_21_18595001 chr2R_18595001 D9 1012 chr2R 18646393 18646423 chr2R 18646560 18646592 11 169 2.0 5.0 3.5 2.4 199 chr2R 18646393 intron SP2637 - chr2R 18646492 intron SP2637 - chr2R 18646592 intron SP2637 - chr2R_11_18645001 chr2R_18645001 D9 1013 chr2R 18713218 18713267 chr2R 18713320 18713369 10 102 2.5 2.0 2.2 3.1 151 chr2R 18713218 intergenic not near genes chr2R 18713294 intergenic not near genes chr2R 18713369 intergenic not near genes chr2R_10_18710001 chr2R_18710001 D9 1014 chr2R 18738201 18738233 chr2R 18738302 18738334 5 101 0.0 1.5 0.8 2.8 133 chr2R 18738201 intron Hs3st-A + chr2R 18738268 intron Hs3st-A + chr2R 18738334 intron Hs3st-A + chr2R_5_18735001 chr2R_18735001 D9 1015 chr2R 18769632 18769737 chr2R 18769918 18769969 6 250 0.0 4.0 2.0 2.0 337 chr2R 18769632 intron Mctp + chr2R 18769800 intron Mctp + chr2R 18769969 intron Mctp + chr2R_6_18765001 chr2R_18765001 D9 1016 chr2R 18778596 18778608 chr2R 18778719 18778731 7 123 2.5 0.0 1.2 3.2 135 chr2R 18778596 intergenic not near genes chr2R 18778664 intergenic not near genes chr2R 18778731 intergenic not near genes chr2R_7_18775001 chr2R_18775001 D9 1017 chr2R 18904426 18904460 chr2R 18904617 18904653 14 192 5.5 3.5 4.5 2.5 227 chr2R 18904426 intron sano + chr2R 18904540 intron sano + chr2R 18904653 intron sano + chr2R_14_18900001 chr2R_18900001 D9 1018 chr2R 18964902 18964944 chr2R 18965003 18965045 6 101 3.0 2.0 2.5 1.7 143 chr2R 18964902 intergenic not near genes chr2R 18964974 intergenic not near genes chr2R 18965045 intergenic not near genes chr2R_6_18960001 chr2R_18960001 D9 1019 chr2R 19124380 19124425 chr2R 19124487 19124532 17 107 6.5 5.0 5.8 2.5 152 chr2R 19124380 exon CG15117 - chr2R 19124456 intron CG15117 - chr2R 19124532 intron CG15117 - chr2R_17_19120001 chr2R_19120001 D9 1020 chr2R 19183320 19183373 chr2R 19183421 19183474 16 101 2.0 2.0 2.0 5.3 154 chr2R 19183320 intron hppy + chr2R 19183397 intron hppy + chr2R 19183474 intron hppy + chr2R_16_19180001 chr2R_19180001 D9 1021 chr2R 19300939 19300991 chr2R 19301047 19301099 12 108 1.0 2.0 1.5 4.8 160 chr2R 19300939 intron Tab2 + chr2R 19301019 intron Tab2 + chr2R 19301099 intron Tab2 + chr2R_12_19300001 chr2R_19300001 D9 1022 chr2R 19385269 19385284 chr2R 19385584 19385599 4 314 2.0 1.0 1.5 1.6 330 chr2R 19385269 intergenic CG10073 + chr2R 19385434 intergenic CG10073 +,CG10081 + chr2R 19385599 intergenic CG10081 + chr2R_4_19385001 chr2R_19385001 D9 1023 chr2R 19388474 19388528 chr2R 19388592 19388646 19 118 7.5 9.5 8.5 2.0 172 chr2R 19388474 intron CG10081 + chr2R 19388560 exon CG10081 + chr2R 19388646 exon CG10081 + chr2R_19_19385001 chr2R_19385001 D9 1024 chr2R 19411797 19411820 chr2R 19411980 19412003 5 183 1.5 2.0 1.8 1.8 206 chr2R 19411797 intron hts - chr2R 19411900 intron hts - chr2R 19412003 intron hts - chr2R_5_19410001 chr2R_19410001 D9 1025 chr2R 19498711 19498762 chr2R 19498817 19498868 13 106 4.0 5.5 4.8 2.2 157 chr2R 19498711 intron CG15120 + chr2R 19498790 intron CG15120 + chr2R 19498868 intron CG15120 + chr2R_13_19495001 chr2R_19495001 D9 1026 chr2R 19535080 19535126 chr2R 19535322 19535368 4 241 4.0 3.0 3.5 0.9 288 chr2R 19535080 intron sm - chr2R 19535224 intron sm - chr2R 19535368 intron sm - chr2R_4_19535001 chr2R_19535001 D9 1027 chr2R 19539121 19539175 chr2R 19539235 19539291 18 116 4.0 3.5 3.8 3.8 170 chr2R 19539121 intron sm - chr2R 19539206 intron sm - chr2R 19539291 intron sm - chr2R_18_19535001 chr2R_19535001 D9 1028 chr2R 19544800 19544857 chr2R 19544905 19544961 9 105 3.5 3.0 3.2 2.1 161 chr2R 19544800 intron sm - chr2R 19544880 intron sm - chr2R 19544961 intron sm - chr2R_9_19540001 chr2R_19540001 D9 1029 chr2R 19715833 19715856 chr2R 19723327 19723350 blood 5 7494 7.0 8.5 7.8 0.6 7517 chr2R 19715833 intergenic not near genes chr2R 19719592 intergenic not near genes chr2R 19723350 intergenic not near genes chr2R_5_19715001 chr2R_19715001 D9 1030 chr2R 19773998 19774023 chr2R 19774136 19774161 4 138 4.5 1.0 2.8 1.1 163 chr2R 19773998 intergenic not near genes chr2R 19774080 intergenic not near genes chr2R 19774161 intergenic not near genes chr2R_4_19770001 chr2R_19770001 D9 1031 chr2R 19776581 19776624 chr2R 19779926 19779972 jockey 9 3347 3.5 5.0 4.2 1.7 3391 chr2R 19776581 intergenic not near genes chr2R 19778276 intergenic not near genes chr2R 19779972 intergenic not near genes chr2R_9_19775001 chr2R_19775001 D9 1032 chr2R 19794846 19794897 chr2R 19794970 19795027 9 127 2.5 3.0 2.8 2.4 181 chr2R 19794846 intergenic not near genes chr2R 19794936 intergenic not near genes chr2R 19795027 intergenic not near genes chr2R_9_19790001 chr2R_19790001 D9 1033 chr2R 19801998 19802021 chr2R 19802235 19802258 7 236 3.5 2.5 3.0 1.8 260 chr2R 19801998 intergenic not near genes chr2R 19802128 intergenic not near genes chr2R 19802258 intergenic not near genes chr2R_7_19800001 chr2R_19800001 D9 1034 chr2R 19807647 19807700 chr2R 19807754 19807807 13 107 4.0 2.5 3.2 3.1 160 chr2R 19807647 intergenic not near genes chr2R 19807727 intergenic not near genes chr2R 19807807 intergenic not near genes chr2R_13_19805001 chr2R_19805001 D9 1035 chr2R 19914838 19914867 chr2R 19922275 19922304 mdg1 6 7437 9.5 7.5 8.5 0.6 7466 chr2R 19914838 intergenic not near genes chr2R 19918571 intergenic not near genes chr2R 19922304 intergenic not near genes chr2R_6_19915001 chr2R_19915001 D9 1036 chr2R 19922581 19922624 chr2R 19922683 19922726 24 102 5.5 3.0 4.2 4.6 145 chr2R 19922581 intergenic not near genes chr2R 19922654 intergenic not near genes chr2R 19922726 intergenic not near genes chr2R_24_19920001 chr2R_19920001 D9 1037 chr2R 19940551 19940601 chr2R 19940986 19941036 7 434 0.5 1.5 1.0 3.5 485 chr2R 19940551 intergenic CR43421 - chr2R 19940794 intergenic CR43421 - chr2R 19941036 intergenic CR43421 - chr2R_7_19940001 chr2R_19940001 D9 1038 chr2R 19957409 19957457 chr2R 19962636 19962682 copia 19 5226 4.0 4.0 4.0 3.8 5273 chr2R 19957409 intergenic CG44623 + chr2R 19960046 intergenic not near genes chr2R 19962682 intergenic not near genes chr2R_19_19960001 chr2R_19960001 D9 1039 chr2R 20057190 20057205 chr2R 20057313 20057328 9 123 2.0 1.5 1.8 3.2 138 chr2R 20057190 intergenic not near genes chr2R 20057259 intergenic not near genes chr2R 20057328 intergenic not near genes chr2R_9_20055001 chr2R_20055001 D9 1040 chr2R 20069221 20069256 chr2R 20071876 20071911 opus 8 2655 4.5 2.5 3.5 1.8 2690 chr2R 20069221 intergenic not near genes chr2R 20070566 intergenic not near genes chr2R 20071911 intergenic not near genes chr2R_8_20070001 chr2R_20070001 D9 1041 chr2R 20174628 20174671 chr2R 20174729 20174770 14 100 0.0 6.0 3.0 3.5 142 chr2R 20174628 intergenic not near genes chr2R 20174699 intergenic not near genes chr2R 20174770 intergenic not near genes chr2R_14_20170001 chr2R_20170001 D9 1042 chr2R 20338740 20338754 chr2R 20338842 20338859 4 104 3.0 0.0 1.5 1.6 119 chr2R 20338740 intergenic not near genes chr2R 20338800 intergenic not near genes chr2R 20338859 intergenic not near genes chr2R_4_20335001 chr2R_20335001 D9 1043 chr2R 20432454 20432504 chr2R 20432575 20432624 16 120 2.5 2.5 2.5 4.6 170 chr2R 20432454 intron CG12484 + chr2R 20432539 intron CG12484 + chr2R 20432624 intron CG12484 + chr2R_16_20430001 chr2R_20430001 D9 1044 chr2R 20572569 20572582 chr2R 20572684 20572697 4 115 4.5 6.5 5.5 0.6 128 chr2R 20572569 intron qsm - chr2R 20572633 intron qsm - chr2R 20572697 intron qsm - chr2R_4_20570001 chr2R_20570001 D9 1045 chr2R 20671176 20671234 chr2R 20671291 20671334 19 109 7.0 1.0 4.0 3.8 158 chr2R 20671176 intergenic CG30152 +,exu - chr2R 20671255 5` UTR CG30152 + chr2R 20671334 5` UTR CG30152 + chr2R_19_20670001 chr2R_20670001 D9 1046 chr2R 20690732 20690788 chr2R 20690833 20690889 31 100 12.0 10.0 11.0 2.6 157 chr2R 20690732 intergenic not near genes chr2R 20690810 intergenic not near genes chr2R 20690889 intergenic not near genes chr2R_31_20690001 chr2R_20690001 D9 1047 chr2R 20739420 20739465 chr2R 20744213 20744258 F-element 20 4793 11.5 8.0 9.8 1.9 4838 chr2R 20739420 intron dpr + chr2R 20741839 intron dpr + chr2R 20744258 intron dpr + chr2R_20_20740001 chr2R_20740001 D9 1048 chr2R 20759801 20759816 chr2R 20759902 20759917 10 100 2.5 16.5 9.5 1.0 116 chr2R 20759801 intergenic not near genes chr2R 20759859 intergenic not near genes chr2R 20759917 intergenic not near genes chr2R_10_20755001 chr2R_20755001 D9 1049 chr2R 20796030 20796062 chr2R 20796168 20796198 7 137 4.0 5.0 4.5 1.3 168 chr2R 20796030 intergenic not near genes chr2R 20796114 intergenic not near genes chr2R 20796198 intergenic not near genes chr2R_7_20795001 chr2R_20795001 D9 1050 chr2R 20838063 20838084 chr2R 20838169 20838190 6 106 0.0 8.5 4.2 1.2 127 chr2R 20838063 intron CR44667 + chr2R 20838126 intron CR44667 + chr2R 20838190 intron CR44667 + chr2R_6_20835001 chr2R_20835001 D9 1051 chr2R 20848905 20848958 chr2R 20849016 20849069 23 111 6.0 9.0 7.5 2.7 164 chr2R 20848905 exon CG17999 - chr2R 20848987 intron CG17999 - chr2R 20849069 intron CG17999 - chr2R_23_20845001 chr2R_20845001 D9 1052 chr2R 20962883 20962938 chr2R 20963005 20963061 12 122 1.0 3.0 2.0 4.0 178 chr2R 20962883 intergenic not near genes chr2R 20962972 intergenic not near genes chr2R 20963061 intergenic not near genes chr2R_12_20960001 chr2R_20960001 D9 1053 chr2R 21056657 21056717 chr2R 21056763 21056823 20 106 8.5 3.5 6.0 2.9 166 chr2R 21056657 5` UTR shg - chr2R 21056740 5` UTR shg - chr2R 21056823 5` UTR shg - chr2R_20_21055001 chr2R_21055001 D9 1054 chr2R 21151094 21151140 chr2R 21153752 21153798 opus 14 2658 2.5 3.5 3.0 3.5 2704 chr2R 21151094 intron CG30389 - chr2R 21152446 intron CG30389 - chr2R 21153798 intron CG30389 - chr2R_14_21150001 chr2R_21150001 D9 1055 chr2R 21247491 21247518 chr2R 21247998 21248025 6 506 7.5 4.5 6.0 0.9 534 chr2R 21247491 intron ASPP - chr2R 21247758 intron ASPP - chr2R 21248025 intron ASPP - chr2R_6_21245001 chr2R_21245001 D9 1056 chr2R 21251801 21251848 chr2R 21252053 21252100 11 252 3.0 2.5 2.8 2.9 299 chr2R 21251801 intergenic not near genes chr2R 21251950 intergenic not near genes chr2R 21252100 intergenic not near genes chr2R_11_21250001 chr2R_21250001 D9 1057 chr2R 21259638 21259661 chr2R 21259742 21259765 10 103 8.0 8.5 8.2 1.1 127 chr2R 21259638 intron Rgk3 + chr2R 21259702 intron Rgk3 + chr2R 21259765 intron Rgk3 + chr2R_10_21255001 chr2R_21255001 D9 1058 chr2R 21322918 21322969 chr2R 21323027 21323078 33 108 4.5 6.0 5.2 5.3 160 chr2R 21322918 5` UTR CG30394 - chr2R 21322998 5` UTR CG30394 - chr2R 21323078 intron CG30394 - chr2R_33_21320001 chr2R_21320001 D9 1059 chr2R 21421313 21421353 chr2R 21421417 21421456 12 104 4.0 5.5 4.8 2.1 143 chr2R 21421313 intron Sdc - chr2R 21421384 intron Sdc - chr2R 21421456 intron Sdc - chr2R_12_21420001 chr2R_21420001 D9 1060 chr2R 21522032 21522086 chr2R 21522190 21522245 4 159 3.0 3.0 3.0 1.0 213 chr2R 21522032 intergenic CG30289 -,Egfr + chr2R 21522138 intergenic Egfr +,CG30289 - chr2R 21522245 intergenic Egfr +,CG30289 - chr2R_4_21520001 chr2R_21520001 D9 1061 chr2R 21546761 21546820 chr2R 21546867 21546882 20 100 7.5 6.0 6.8 2.6 121 chr2R 21546761 intron Egfr + chr2R 21546822 intron Egfr + chr2R 21546882 intron Egfr + chr2R_20_21545001 chr2R_21545001 D9 1062 chr2R 21592824 21592852 chr2R 21592932 21592960 11 106 14.0 10.5 12.2 0.8 136 chr2R 21592824 intergenic not near genes chr2R 21592892 intergenic not near genes chr2R 21592960 intergenic not near genes chr2R_11_21590001 chr2R_21590001 D9 1063 chr2R 21593554 21593608 chr2R 21594285 21594343 39 734 5.0 8.5 6.8 5.0 789 chr2R 21593554 intergenic not near genes chr2R 21593948 intergenic not near genes chr2R 21594343 intergenic not near genes chr2R_39_21590001 chr2R_21590001 D9 1064 chr2R 21700133 21700148 chr2R 21700244 21700259 9 111 16.0 9.5 12.8 0.7 126 chr2R 21700133 intron HmgZ - chr2R 21700196 intron HmgZ - chr2R 21700259 intron HmgZ - chr2R_9_21700001 chr2R_21700001 D9 1065 chr2R 21700157 21700185 chr2R 21700241 21700295 13 105 7.0 8.5 7.8 1.5 138 chr2R 21700157 intron HmgZ - chr2R 21700226 intron HmgZ - chr2R 21700295 intron HmgZ - chr2R_13_21700001 chr2R_21700001 D9 1066 chr2R 21738257 21738306 chr2R 21747442 21747488 roo 23 9183 1.5 4.5 3.0 5.8 9231 chr2R 21738257 intergenic not near genes chr2R 21742872 intergenic not near genes chr2R 21747488 intergenic not near genes chr2R_23_21740001 chr2R_21740001 D9 1067 chr2R 21753063 21753114 chr2R 21753571 21753624 roo 8 509 3.5 3.0 3.2 1.9 561 chr2R 21753063 intergenic not near genes chr2R 21753344 intergenic not near genes chr2R 21753624 intergenic not near genes chr2R_8_21750001 chr2R_21750001 D9 1068 chr2R 21809501 21809553 chr2R 21817766 21817816 roo 8 8264 1.0 5.0 3.0 2.0 8315 chr2R 21809501 intergenic not near genes chr2R 21813658 intergenic not near genes chr2R 21817816 intergenic not near genes chr2R_8_21810001 chr2R_21810001 D9 1069 chr2R 21842976 21842984 chr2R 21843080 21843088 4 104 3.0 1.0 2.0 1.3 112 chr2R 21842976 intergenic not near genes chr2R 21843032 intergenic not near genes chr2R 21843088 intergenic not near genes chr2R_4_21840001 chr2R_21840001 D9 1070 chr2R 21886112 21886167 chr2R 21886211 21886292 6 106 3.0 1.0 2.0 2.0 180 chr2R 21886112 intron Fili + chr2R 21886202 intron Fili + chr2R 21886292 intron Fili + chr2R_6_21885001 chr2R_21885001 D9 1071 chr2R 21888304 21888319 chr2R 21888418 21888435 5 116 3.0 3.0 3.0 1.2 131 chr2R 21888304 intron Fili + chr2R 21888370 intron Fili + chr2R 21888435 intron Fili + chr2R_5_21885001 chr2R_21885001 D9 1072 chr2R 21889552 21889590 chr2R 21889677 21889708 8 118 2.0 0.5 1.2 3.6 156 chr2R 21889552 intron Fili + chr2R 21889630 intron Fili + chr2R 21889708 intron Fili + chr2R_8_21885001 chr2R_21885001 D9 1073 chr2R 21906245 21906289 chr2R 21906371 21906415 11 126 7.0 3.0 5.0 1.8 170 chr2R 21906245 intron Fili + chr2R 21906330 intron Fili + chr2R 21906415 intron Fili + chr2R_11_21905001 chr2R_21905001 D9 1074 chr2R 21922578 21922623 chr2R 21922678 21922725 9 102 4.0 3.5 3.8 1.9 147 chr2R 21922578 intron Fili + chr2R 21922652 intron Fili + chr2R 21922725 intron Fili + chr2R_9_21920001 chr2R_21920001 D9 1075 chr2R 21932223 21932279 chr2R 21932326 21932382 21 102 4.5 5.0 4.8 3.6 159 chr2R 21932223 intron Fili + chr2R 21932302 intron Fili + chr2R 21932382 intron Fili + chr2R_21_21930001 chr2R_21930001 D9 1076 chr2R 21937358 21937389 chr2R 21937479 21937516 23 123 63.0 75.0 69.0 0.3 158 chr2R 21937358 intron Fili + chr2R 21937437 intron Fili + chr2R 21937516 intron Fili + chr2R_23_21935001 chr2R_21935001 D9 1077 chr2R 21985523 21985545 chr2R 21985629 21985651 11 106 4.0 6.0 5.0 1.8 128 chr2R 21985523 intergenic CG30401 - chr2R 21985587 intergenic CG30401 - chr2R 21985651 3` UTR CG30401 - chr2R_11_21985001 chr2R_21985001 D9 1078 chr2R 22003063 22003115 chr2R 22003174 22003226 25 111 5.0 1.0 3.0 6.2 163 chr2R 22003063 intron CG34370 - chr2R 22003144 intron CG34370 - chr2R 22003226 intron CG34370 - chr2R_25_22000001 chr2R_22000001 D9 1079 chr2R 22004273 22004310 chr2R 22004392 22004429 7 119 5.0 3.5 4.2 1.3 156 chr2R 22004273 intron CG34370 - chr2R 22004351 intron CG34370 - chr2R 22004429 intron CG34370 - chr2R_7_22000001 chr2R_22000001 D9 1080 chr2R 22029506 22029531 chr2R 22029607 22029634 5 103 2.0 1.5 1.8 1.8 128 chr2R 22029506 intron CG34370 - chr2R 22029570 intron CG34370 - chr2R 22029634 intron CG34370 - chr2R_5_22025001 chr2R_22025001 D9 1081 chr2R 22033834 22033853 chr2R 22033945 22033953 4 108 3.0 5.0 4.0 0.8 119 chr2R 22033834 intron CG34370 - chr2R 22033894 intron CG34370 - chr2R 22033953 intron CG34370 - chr2R_4_22030001 chr2R_22030001 D9 1082 chr2R 22040132 22040185 chr2R 22040238 22040291 21 105 7.0 5.5 6.2 2.9 159 chr2R 22040132 intergenic not near genes chr2R 22040212 intergenic not near genes chr2R 22040291 intergenic not near genes chr2R_21_22040001 chr2R_22040001 D9 1083 chr2R 22047965 22048022 chr2R 22048118 22048173 32 153 9.0 8.5 8.8 3.3 208 chr2R 22047965 intergenic not near genes chr2R 22048069 intergenic not near genes chr2R 22048173 intergenic not near genes chr2R_32_22045001 chr2R_22045001 D9 1084 chr2R 22182887 22182920 chr2R 22182996 22183029 7 109 3.5 1.5 2.5 2.0 142 chr2R 22182887 intergenic CG11170 -,CG11275 +,MED16 + chr2R 22182958 intergenic CG11170 -,MED16 +,CG11275 + chr2R 22183029 intergenic MED16 +,CG11170 -,CG11275 + chr2R_7_22180001 chr2R_22180001 D9 1085 chr2R 22205848 22205879 chr2R 22205963 22205996 14 117 2.0 4.0 3.0 3.5 148 chr2R 22205848 intergenic CG3290 -,CG3292 - chr2R 22205922 intergenic CG3290 -,CG3292 - chr2R 22205996 intergenic CG3290 -,CG3292 - chr2R_14_22205001 chr2R_22205001 D9 1086 chr2R 22248821 22248866 chr2R 22248923 22248968 22 101 6.0 7.5 6.8 2.8 147 chr2R 22248821 intron dve + chr2R 22248894 intron dve + chr2R 22248968 intron dve + chr2R_22_22245001 chr2R_22245001 D9 1087 chr2R 22248867 22248872 chr2R 22248919 22248972 5 91 8.0 7.5 7.8 0.6 105 chr2R 22248867 intron dve + chr2R 22248920 intron dve + chr2R 22248972 intron dve + chr2R_5_22245001 chr2R_22245001 D9 1088 chr2R 22349678 22349714 chr2R 22351485 22351523 jockey 12 1808 4.5 4.0 4.2 2.3 1845 chr2R 22349678 intron Liprin-gamma - chr2R 22350600 intron Liprin-gamma - chr2R 22351523 intron Liprin-gamma - chr2R_12_22350001 chr2R_22350001 D9 1089 chr2R 22360359 22360375 chr2R 22360817 22360831 jockey 6 458 9.5 6.0 7.8 0.7 472 chr2R 22360359 intron Liprin-gamma - chr2R 22360595 intron Liprin-gamma - chr2R 22360831 intron Liprin-gamma - chr2R_6_22360001 chr2R_22360001 D9 1090 chr2R 22377796 22377838 chr2R 22377907 22377945 7 109 2.5 7.0 4.8 1.2 149 chr2R 22377796 3` UTR Rtf1 + chr2R 22377870 3` UTR Rtf1 + chr2R 22377945 3` UTR Rtf1 + chr2R_7_22375001 chr2R_22375001 D9 1091 chr2R 22460358 22460405 chr2R 22460462 22460509 8 104 2.5 4.0 3.2 1.9 151 chr2R 22460358 intron CG10384 + chr2R 22460434 intron CG10384 + chr2R 22460509 intron CG10384 + chr2R_8_22460001 chr2R_22460001 D9 1092 chr2R 22477553 22477600 chr2R 22477681 22477730 16 130 10.5 5.5 8.0 1.8 177 chr2R 22477553 intergenic CG45063 - chr2R 22477642 intergenic CG45063 - chr2R 22477730 intergenic CG45063 - chr2R_16_22475001 chr2R_22475001 D9 1093 chr2R 22503860 22503894 chr2R 22503980 22504014 8 119 0.0 1.5 0.8 4.4 154 chr2R 22503860 intron px - chr2R 22503937 intron px - chr2R 22504014 intron px - chr2R_8_22500001 chr2R_22500001 D9 1094 chr2R 22525725 22525773 chr2R 22529305 22529352 jockey 16 3579 5.0 6.0 5.5 2.5 3627 chr2R 22525725 intron px - chr2R 22527538 intron px - chr2R 22529352 intron px - chr2R_16_22525001 chr2R_22525001 D9 1095 chr2R 22575642 22575692 chr2R 22575744 22575796 14 103 5.5 5.5 5.5 2.2 154 chr2R 22575642 intron dnr1 - chr2R 22575719 intron dnr1 - chr2R 22575796 intron dnr1 - chr2R_14_22575001 chr2R_22575001 D9 1096 chr2R 22580425 22580445 chr2R 22586594 22586596 diver 6 6165 2.5 3.5 3.0 1.5 6171 chr2R 22580425 intron dnr1 - chr2R 22583510 intron dnr1 - chr2R 22586596 intron dnr1 - chr2R_6_22580001 chr2R_22580001 D9 1097 chr2R 22588128 22588151 chr2R 22588248 22588271 15 119 15.0 8.5 11.8 1.2 143 chr2R 22588128 intron dnr1 - chr2R 22588200 intron dnr1 - chr2R 22588271 intron dnr1 - chr2R_15_22585001 chr2R_22585001 D9 1098 chr2R 22596217 22596233 chr2R 22596321 22596337 7 104 3.0 3.0 3.0 1.8 120 chr2R 22596217 3` UTR CG3927 + chr2R 22596277 3` UTR CG3927 + chr2R 22596337 3` UTR CG3927 + chr2R_7_22595001 chr2R_22595001 D9 1099 chr2R 22624778 22624829 chr2R 22627573 22627622 24 2794 19.0 53.0 36.0 0.6 2844 chr2R 22624778 intron CG33143 + chr2R 22626200 intron CG33143 + chr2R 22627622 intron CG33143 + chr2R_24_22625001 chr2R_22625001 D9 1100 chr2R 22756628 22756648 chr2R 22756731 22756751 8 102 3.5 4.5 4.0 1.6 123 chr2R 22756628 intron,intron CG42260 -,CR30267 + chr2R 22756690 intron,intron CG42260 -,CR30267 + chr2R 22756751 intron,intron CG42260 -,CR30267 + chr2R_8_22755001 chr2R_22755001 D9 1101 chr2R 22774945 22774990 chr2R 22775388 22775434 jockey 15 444 3.0 2.0 2.5 4.3 489 chr2R 22774945 intron CG42260 - chr2R 22775190 intron CG42260 - chr2R 22775434 intron CG42260 - chr2R_15_22775001 chr2R_22775001 D9 1102 chr2R 22785705 22785757 chr2R 22785808 22785860 9 103 4.5 0.5 2.5 2.6 155 chr2R 22785705 intron CG42260 - chr2R 22785782 intron CG42260 - chr2R 22785860 intron CG42260 - chr2R_9_22785001 chr2R_22785001 D9 1103 chr2R 22907379 22907424 chr2R 22907497 22907538 25 117 11.5 6.5 9.0 2.5 159 chr2R 22907379 intron nahoda + chr2R 22907458 intron nahoda + chr2R 22907538 intron nahoda + chr2R_25_22905001 chr2R_22905001 D9 1104 chr2R 22945031 22945076 chr2R 22945170 22945215 21 139 4.5 4.5 4.5 3.8 184 chr2R 22945031 exon CG42694 + chr2R 22945123 3` UTR CG42694 + chr2R 22945215 intergenic CG42694 + chr2R_21_22945001 chr2R_22945001 D9 1105 chr2R 22978259 22978314 chr2R 22978362 22978418 10 103 3.0 3.5 3.2 2.4 159 chr2R 22978259 intergenic not near genes chr2R 22978338 intergenic not near genes chr2R 22978418 intergenic not near genes chr2R_10_22975001 chr2R_22975001 D9 1106 chr2R 23041180 23041201 chr2R 23041283 23041304 7 103 3.5 12.0 7.8 0.8 124 chr2R 23041180 intron,intron twi +,CG42741 - chr2R 23041242 intron,intron twi +,CG42741 - chr2R 23041304 intron,intron twi +,CG42741 - chr2R_7_23040001 chr2R_23040001 D9 1107 chr2R 23084035 23084079 chr2R 23086891 23086935 10 2856 13.5 7.5 10.5 0.9 2900 chr2R 23084035 intergenic not near genes chr2R 23085485 intergenic CG9877 - chr2R 23086935 intergenic CG13538 + chr2R_10_23085001 chr2R_23085001 D9 1108 chr2R 23084015 23084071 chr2R 23087241 23087297 9 3226 12.5 21.0 16.8 0.5 3282 chr2R 23084015 intergenic not near genes chr2R 23085656 intergenic CG9877 - chr2R 23087297 exon CG13538 + chr2R_9_23085001 chr2R_23085001 D9 1109 chr2R 23158323 23158355 chr2R 23158425 23158457 19 101 7.5 9.0 8.2 2.1 134 chr2R 23158323 intron CG9899 + chr2R 23158390 intron CG9899 + chr2R 23158457 intron CG9899 + chr2R_19_23155001 chr2R_23155001 D9 1110 chr2R 23179680 23179731 chr2R 23179871 23179920 13 190 6.5 5.5 6.0 1.9 240 chr2R 23179680 intron CG34371 - chr2R 23179800 intron CG34371 - chr2R 23179920 intron CG34371 - chr2R_13_23175001 chr2R_23175001 D9 1111 chr2R 23186546 23186593 chr2R 23186649 23186696 10 103 3.5 1.5 2.5 2.9 150 chr2R 23186546 intron CG34371 - chr2R 23186621 intron CG34371 - chr2R 23186696 intron CG34371 - chr2R_10_23185001 chr2R_23185001 D9 1112 chr2R 23236791 23236853 chr2R 23236914 23236972 7 120 4.0 2.5 3.2 1.7 181 chr2R 23236791 intergenic not near genes chr2R 23236882 intergenic not near genes chr2R 23236972 intergenic not near genes chr2R_7_23235001 chr2R_23235001 D9 1113 chr2R 23254608 23254653 chr2R 23254713 23254758 17 104 7.0 10.0 8.5 1.8 150 chr2R 23254608 intergenic not near genes chr2R 23254683 intergenic not near genes chr2R 23254758 intergenic not near genes chr2R_17_23250001 chr2R_23250001 D9 1114 chr2R 23304256 23304305 chr2R 23304648 23304697 14 391 5.0 3.5 4.2 2.7 441 chr2R 23304256 intergenic not near genes chr2R 23304476 intergenic not near genes chr2R 23304697 intergenic not near genes chr2R_14_23300001 chr2R_23300001 D9 1115 chr2R 23461125 23461139 chr2R 23461227 23461241 5 102 14.0 10.0 12.0 0.4 116 chr2R 23461125 intron CG43795 + chr2R 23461183 intron CG43795 + chr2R 23461241 intron CG43795 + chr2R_5_23460001 chr2R_23460001 D9 1116 chr2R 23463362 23463420 chr2R 23463464 23463524 19 104 8.5 6.0 7.2 2.3 162 chr2R 23463362 intron CG43795 + chr2R 23463443 intron CG43795 + chr2R 23463524 intron CG43795 + chr2R_19_23460001 chr2R_23460001 D9 1117 chr2R 23467545 23467588 chr2R 23467700 23467743 17 154 4.5 4.0 4.2 3.3 198 chr2R 23467545 intron CG43795 + chr2R 23467644 intron CG43795 + chr2R 23467743 intron CG43795 + chr2R_17_23465001 chr2R_23465001 D9 1118 chr2R 23482516 23482533 chr2R 23482619 23482636 8 103 6.5 0.0 3.2 1.9 120 chr2R 23482516 intron CG43795 + chr2R 23482576 intron CG43795 + chr2R 23482636 intron CG43795 + chr2R_8_23480001 chr2R_23480001 D9 1119 chr2R 23496716 23496768 chr2R 23497076 23497128 24 359 5.5 4.0 4.8 4.1 412 chr2R 23496716 intergenic not near genes chr2R 23496922 intergenic not near genes chr2R 23497128 intergenic not near genes chr2R_24_23495001 chr2R_23495001 D9 1120 chr2R 23529551 23529607 chr2R 23537149 23537208 412 29 7600 8.0 8.0 8.0 3.2 7657 chr2R 23529551 intron bw - chr2R 23533380 intron bw - chr2R 23537208 exon bw - chr2R_29_23530001 chr2R_23530001 D9 1121 chr2R 23563871 23563920 chr2R 23563976 23564025 25 105 6.0 9.0 7.5 2.9 154 chr2R 23563871 3` UTR Pi3K59F + chr2R 23563948 3` UTR Pi3K59F + chr2R 23564025 3` UTR,5` UTR Pi3K59F +,CG30184 + chr2R_25_23560001 chr2R_23560001 D9 1122 chr2R 23589155 23589192 chr2R 23589257 23589294 12 102 6.0 9.5 7.8 1.4 139 chr2R 23589155 intron apt + chr2R 23589224 intron apt + chr2R 23589294 intron apt + chr2R_12_23585001 chr2R_23585001 D9 1123 chr2R 23607018 23607192 chr2R 23607124 23607310 20 109 2.0 2.0 2.0 6.7 292 chr2R 23607018 intron CG17664 - chr2R 23607164 intron CG17664 - chr2R 23607310 intron CG17664 - chr2R_20_23605001 chr2R_23605001 D9 1124 chr2R 23705625 23705680 chr2R 23710878 23710933 39 5255 61.0 68.5 64.8 0.6 5308 chr2R 23705625 exon l(2)not - chr2R 23708279 intron,exon l(2)not -,l(2)tid + chr2R 23710933 intergenic not near genes chr2R_39_23705001 chr2R_23705001 D9 1125 chr2R 23719775 23719819 chr2R 23720015 23720060 23 239 8.5 4.5 6.5 3.1 285 chr2R 23719775 intron,exon Sesn +,CG18128 - chr2R 23719918 intron,5` UTR Sesn +,CG18128 - chr2R 23720060 intron Sesn + chr2R_23_23715001 chr2R_23715001 D9 1126 chr2R 23744744 23744793 chr2R 23744848 23744897 11 104 5.0 6.5 5.8 1.6 153 chr2R 23744744 intron egl - chr2R 23744820 intron egl - chr2R 23744897 intron egl - chr2R_11_23740001 chr2R_23740001 D9 1127 chr2R 23752031 23752048 chr2R 23752139 23752154 12 107 18.0 21.5 19.8 0.6 123 chr2R 23752031 exon CG11300 + chr2R 23752092 exon CG11300 + chr2R 23752154 exon CG11300 + chr2R_12_23750001 chr2R_23750001 D9 1128 chr2R 23784448 23784502 chr2R 23784551 23784605 9 103 1.5 2.0 1.8 3.2 157 chr2R 23784448 intron CG9850 - chr2R 23784526 intron CG9850 - chr2R 23784605 intron CG9850 - chr2R_9_23780001 chr2R_23780001 D9 1129 chr2R 23824110 23824168 chr2R 23824226 23824281 12 116 10.0 2.5 6.2 1.7 171 chr2R 23824110 intron,intron CG5549 +,CG4763 - chr2R 23824196 intron,intron CG5549 +,CG4763 - chr2R 23824281 intron,intron CG5549 +,CG4763 - chr2R_12_23820001 chr2R_23820001 D9 1130 chr2R 23877730 23877744 chr2R 23878226 23878240 297 5 496 2.0 4.5 3.2 1.2 510 chr2R 23877730 intergenic ken +,TM4SF + chr2R 23877985 intergenic TM4SF + chr2R 23878240 5` UTR TM4SF + chr2R_5_23875001 chr2R_23875001 D9 1131 chr2R 23914285 23914331 chr2R 23921934 23921980 412 30 7648 7.0 15.0 11.0 2.5 7695 chr2R 23914285 exon kcc + chr2R 23918132 intron kcc + chr2R 23921980 exon kcc + chr2R_30_23915001 chr2R_23915001 D9 1132 chr2R 23986492 23986543 chr2R 23986597 23986648 17 105 1.5 4.0 2.8 4.5 156 chr2R 23986492 intron Phm - chr2R 23986570 intron Phm - chr2R 23986648 intron,5` UTR Phm -,CG30178 + chr2R_17_23985001 chr2R_23985001 D9 1133 chr2R 24008387 24008443 chr2R 24008498 24008554 13 111 3.5 5.5 4.5 2.4 167 chr2R 24008387 intron Unc-89 - chr2R 24008470 intron Unc-89 - chr2R 24008554 intron Unc-89 - chr2R_13_24005001 chr2R_24005001 D9 1134 chr2R 24107390 24107444 chr2R 24107496 24107549 6 106 1.5 0.5 1.0 3.0 159 chr2R 24107390 3` UTR CG4049 - chr2R 24107470 3` UTR CG4049 - chr2R 24107549 3` UTR CG4049 - chr2R_6_24105001 chr2R_24105001 D9 1135 chr2R 24147043 24147098 chr2R 24154644 24154701 412 27 7602 7.0 9.0 8.0 3.0 7658 chr2R 24147043 intron Dat + chr2R 24150872 intron Dat + chr2R 24154701 intron Dat + chr2R_27_24150001 chr2R_24150001 D9 1136 chr2R 24177209 24177257 chr2R 24184719 24184767 412 7 7510 1.5 1.5 1.5 2.8 7558 chr2R 24177209 3` UTR Nop60B + chr2R 24180988 intron Nop60B + chr2R 24184767 3` UTR Nop60B + chr2R_7_24180001 chr2R_24180001 D9 1137 chr2R 24272801 24272811 chr2R 24272904 24272904 roo 7 100 12.0 17.0 14.5 0.5 103 chr2R 24272801 intergenic not near genes chr2R 24272852 intergenic not near genes chr2R 24272904 intergenic not near genes chr2R_7_24270001 chr2R_24270001 D9 1138 chr2R 24303498 24303536 chr2R 24303602 24303640 19 103 10.0 12.0 11.0 1.6 142 chr2R 24303498 intergenic not near genes chr2R 24303569 intergenic not near genes chr2R 24303640 intergenic not near genes chr2R_19_24300001 chr2R_24300001 D9 1139 chr2R 24430923 24431098 chr2R 24431036 24431199 31 104 1.5 2.5 2.0 10.3 276 chr2R 24430923 intergenic CG15873 -,Pgam5-2 - chr2R 24431061 intergenic Pgam5-2 -,CG15873 - chr2R 24431199 intergenic Pgam5-2 -,CG15873 - chr2R_31_24430001 chr2R_24430001 D9 1140 chr2R 24432738 24432793 chr2R 24433269 24433322 23 531 3.5 4.5 4.0 4.6 584 chr2R 24432738 intergenic Pgam5-2 - chr2R 24433030 intergenic Pgam5-2 - chr2R 24433322 intergenic not near genes chr2R_23_24430001 chr2R_24430001 D9 1141 chr2R 24493061 24493119 chr2R 24493175 24493230 8 113 0.0 5.0 2.5 2.3 169 chr2R 24493061 intergenic CG13590 -,CG13589 - chr2R 24493146 intergenic CG13590 -,CG13589 - chr2R 24493230 intergenic CG13590 -,CG13589 - chr2R_8_24490001 chr2R_24490001 D9 1142 chr2R 24509283 24509340 chr2R 24509393 24509450 14 110 1.5 2.5 2.0 4.7 167 chr2R 24509283 intergenic Letm1 - chr2R 24509366 intergenic Letm1 - chr2R 24509450 intergenic Letm1 - chr2R_14_24505001 chr2R_24505001 D9 1143 chr2R 24590075 24590106 chr2R 24590207 24590237 15 132 7.5 3.5 5.5 2.3 162 chr2R 24590075 intron pio + chr2R 24590156 intron pio + chr2R 24590237 intron pio + chr2R_15_24590001 chr2R_24590001 D9 1144 chr2R 24647566 24647614 chr2R 24655146 24655196 412 18 7582 6.5 5.5 6.0 2.6 7630 chr2R 24647566 intergenic not near genes chr2R 24651381 intergenic not near genes chr2R 24655196 intergenic not near genes chr2R_18_24650001 chr2R_24650001 D9 1145 chr2R 24727860 24727912 chr2R 24735393 24735445 mdg1 29 7533 9.0 8.5 8.8 3.0 7585 chr2R 24727860 intron Mid1 - chr2R 24731652 intron Mid1 - chr2R 24735445 intron Mid1 - chr2R_29_24730001 chr2R_24730001 D9 1146 chr2R 24751647 24751694 chr2R 24751750 24751797 22 103 8.5 5.5 7.0 2.8 150 chr2R 24751647 intron CG30421 + chr2R 24751722 intron CG30421 + chr2R 24751797 intron CG30421 + chr2R_22_24750001 chr2R_24750001 D9 1147 chr2R 24763596 24763643 chr2R 24765592 24765644 G2 19 2000 7.0 11.5 9.2 1.9 2048 chr2R 24763596 exon CG3894 + chr2R 24764620 intron CG3894 + chr2R 24765644 exon CG3894 + chr2R_19_24760001 chr2R_24760001 D9 1148 chr2R 24859816 24859869 chr2R 24859927 24859980 13 111 3.0 3.5 3.2 3.1 164 chr2R 24859816 5` UTR CR44829 + chr2R 24859898 5` UTR CR44829 + chr2R 24859980 5` UTR CR44829 + chr2R_13_24855001 chr2R_24855001 D9 1149 chr2R 24884027 24884070 chr2R 24884133 24884176 9 106 3.5 2.5 3.0 2.2 149 chr2R 24884027 intron NKAIN + chr2R 24884102 intron NKAIN + chr2R 24884176 intron NKAIN + chr2R_9_24880001 chr2R_24880001 D9 1150 chr2R 24953254 24953296 chr2R 24953362 24953404 11 108 3.5 2.0 2.8 2.9 150 chr2R 24953254 exon CG12851 + chr2R 24953329 3` UTR CG12851 + chr2R 24953404 3` UTR CG12851 + chr2R_11_24950001 chr2R_24950001 D9 1151 chr2R 25022617 25022666 chr2R 25022724 25022761 11 107 3.0 2.5 2.8 2.9 144 chr2R 25022617 intron uzip + chr2R 25022689 intron uzip + chr2R 25022761 intron uzip + chr2R_11_25020001 chr2R_25020001 D9 1152 chr2R 25101252 25101300 chr2R 25101379 25101427 16 127 4.5 3.0 3.8 3.3 175 chr2R 25101252 intron lov - chr2R 25101340 intron lov - chr2R 25101427 intron lov - chr2R_16_25100001 chr2R_25100001 D9 1153 chr2R 25141660 25141679 chr2R 25159375 25159394 roo 6 17715 0.0 1.5 0.8 3.3 17734 chr2R 25141660 intergenic not near genes chr2R 25150527 intergenic not near genes chr2R 25159394 intergenic not near genes chr2R_6_25150001 chr2R_25150001 D9 1154 chr2R 25180748 25180790 chr2R 25180850 25180892 10 102 2.5 3.5 3.0 2.5 144 chr2R 25180748 intergenic not near genes chr2R 25180820 intergenic not near genes chr2R 25180892 intergenic not near genes chr2R_10_25180001 chr2R_25180001 D9 1155 chr2R 25207813 25207844 chr2R 25208230 25208261 4 417 7.5 9.5 8.5 0.4 448 chr2R 25207813 5` UTR CG9380 - chr2R 25208037 intron CG9380 - chr2R 25208261 intron CG9380 - chr2R_4_25205001 chr2R_25205001 D9 1156 chr3L 86470 86486 chr3L 86574 86590 6 104 0.5 1.5 1.0 3.0 120 chr3L 86470 intergenic not near genes chr3L 86530 intergenic not near genes chr3L 86590 intergenic not near genes chr3L_6_85001 chr3L_85001 D9 1157 chr3L 87051 87075 chr3L 87358 87382 5 307 3.0 2.0 2.5 1.4 331 chr3L 87051 intergenic not near genes chr3L 87216 intergenic not near genes chr3L 87382 intergenic not near genes chr3L_5_85001 chr3L_85001 D9 1158 chr3L 105730 105772 chr3L 105850 105892 6 119 1.5 1.5 1.5 2.4 162 chr3L 105730 intergenic not near genes chr3L 105811 intergenic not near genes chr3L 105892 intergenic not near genes chr3L_6_105001 chr3L_105001 D9 1159 chr3L 365503 365554 chr3L 365614 365665 12 111 3.5 2.0 2.8 3.2 162 chr3L 365503 3` UTR CG1233 + chr3L 365584 3` UTR CG1233 + chr3L 365665 3` UTR,3` UTR CG1233 +,CG13884 - chr3L_12_365001 chr3L_365001 D9 1160 chr3L 393152 393209 chr3L 393276 393334 8 124 6.0 1.5 3.8 1.7 182 chr3L 393152 3` UTR CR45378 - chr3L 393243 3` UTR CR45378 - chr3L 393334 intergenic CR45378 -,CR43969 + chr3L_8_390001 chr3L_390001 D9 1161 chr3L 402665 402717 chr3L 409742 409795 297 35 7077 10.5 9.0 9.8 3.2 7130 chr3L 402665 intergenic not near genes chr3L 406230 intergenic not near genes chr3L 409795 intergenic not near genes chr3L_35_405001 chr3L_405001 D9 1162 chr3L 459952 460007 chr3L 460054 460109 12 102 7.0 2.5 4.8 2.1 157 chr3L 459952 intron klar - chr3L 460030 intron klar - chr3L 460109 intron klar - chr3L_12_460001 chr3L_460001 D9 1163 chr3L 494591 494612 chr3L 494698 494715 7 105 5.0 0.5 2.8 1.8 124 chr3L 494591 intron klar - chr3L 494653 intron klar - chr3L 494715 intron klar - chr3L_7_490001 chr3L_490001 D9 1164 chr3L 540693 540746 chr3L 540812 540864 29 119 6.0 8.0 7.0 3.6 171 chr3L 540693 intergenic klar -,CG17180 + chr3L 540778 intergenic CG17180 +,klar - chr3L 540864 5` UTR CG17180 + chr3L_29_540001 chr3L_540001 D9 1165 chr3L 563949 564001 chr3L 564153 564205 30 203 6.5 2.0 4.2 5.8 256 chr3L 563949 intron hipk + chr3L 564077 intron hipk + chr3L 564205 intron hipk + chr3L_30_560001 chr3L_560001 D9 1166 chr3L 642447 642485 chr3L 642563 642601 14 116 6.0 6.5 6.2 1.9 154 chr3L 642447 5` UTR CR43334 + chr3L 642524 5` UTR CR43334 + chr3L 642601 5` UTR CR43334 + chr3L_14_640001 chr3L_640001 D9 1167 chr3L 651366 651417 chr3L 651479 651530 14 113 12.0 5.5 8.8 1.4 164 chr3L 651366 intergenic Gale +,CG3402 - chr3L 651448 intergenic CG3402 -,Gale + chr3L 651530 intergenic CG3402 -,Gale + chr3L_14_650001 chr3L_650001 D9 1168 chr3L 705879 705919 chr3L 705998 706040 14 121 10.0 5.5 7.8 1.6 161 chr3L 705879 intergenic CG13895 -,CR44514 + chr3L 705960 3` UTR CG13895 - chr3L 706040 3` UTR CG13895 - chr3L_14_705001 chr3L_705001 D9 1169 chr3L 789895 789944 chr3L 790405 790454 roo 9 510 3.5 3.5 3.5 2.0 559 chr3L 789895 intergenic not near genes chr3L 790174 intergenic not near genes chr3L 790454 intergenic not near genes chr3L_9_790001 chr3L_790001 D9 1170 chr3L 857981 858025 chr3L 866478 866519 Tirant 21 8505 10.5 11.0 10.8 1.8 8538 chr3L 857981 intergenic not near genes chr3L 862250 intergenic not near genes chr3L 866519 5` UTR CG12502 + chr3L_21_860001 chr3L_860001 D9 1171 chr3L 905077 905094 chr3L 905186 905203 5 109 0.0 8.0 4.0 1.0 126 chr3L 905077 intergenic not near genes chr3L 905140 intergenic not near genes chr3L 905203 intergenic not near genes chr3L_5_905001 chr3L_905001 D9 1172 chr3L 925154 925208 chr3L 932605 932659 mdg1 12 7451 4.0 5.5 4.8 2.1 7505 chr3L 925154 intron Glut1 + chr3L 928906 intron Glut1 + chr3L 932659 intron Glut1 + chr3L_12_925001 chr3L_925001 D9 1173 chr3L 933883 933939 chr3L 934012 934067 14 128 1.5 4.5 3.0 3.5 184 chr3L 933883 intron Glut1 + chr3L 933975 intron Glut1 + chr3L 934067 intron Glut1 + chr3L_14_930001 chr3L_930001 D9 1174 chr3L 939751 939794 chr3L 940897 940940 jockey 19 1145 6.5 4.5 5.5 2.9 1189 chr3L 939751 intron Glut1 + chr3L 940346 intron Glut1 + chr3L 940940 intron Glut1 + chr3L_19_940001 chr3L_940001 D9 1175 chr3L 987449 987472 chr3L 987542 987574 17 96 24.5 18.5 21.5 0.8 125 chr3L 987449 intergenic not near genes chr3L 987512 intergenic not near genes chr3L 987574 intergenic not near genes chr3L_17_985001 chr3L_985001 D9 1176 chr3L 1040524 1040580 chr3L 1040633 1040687 14 109 6.0 5.5 5.8 2.1 163 chr3L 1040524 intron bab1 - chr3L 1040606 intron bab1 - chr3L 1040687 intron bab1 - chr3L_14_1040001 chr3L_1040001 D9 1177 chr3L 1047330 1047384 chr3L 1055167 1055211 412 14 7827 1.5 2.5 2.0 4.7 7881 chr3L 1047330 intron bab1 - chr3L 1051270 intron bab1 - chr3L 1055211 intron bab1 - chr3L_14_1050001 chr3L_1050001 D9 1178 chr3L 1077735 1077788 chr3L 1078036 1078089 11 301 2.5 2.0 2.2 3.4 354 chr3L 1077735 intron bab1 - chr3L 1077912 intron bab1 - chr3L 1078089 intron bab1 - chr3L_11_1075001 chr3L_1075001 D9 1179 chr3L 1109607 1109666 chr3L 1109720 1109779 25 113 7.5 3.5 5.5 3.8 172 chr3L 1109607 intergenic not near genes chr3L 1109693 intergenic not near genes chr3L 1109779 intergenic not near genes chr3L_25_1105001 chr3L_1105001 D9 1180 chr3L 1145215 1145268 chr3L 1145319 1145372 11 104 3.0 0.5 1.8 3.9 157 chr3L 1145215 intron bab2 - chr3L 1145294 intron bab2 - chr3L 1145372 intron bab2 - chr3L_11_1145001 chr3L_1145001 D9 1181 chr3L 1154117 1154154 chr3L 1163292 1163329 roo 12 9175 2.5 6.0 4.2 2.3 9212 chr3L 1154117 intron bab2 - chr3L 1158723 intron bab2 - chr3L 1163329 intron bab2 - chr3L_12_1155001 chr3L_1155001 D9 1182 chr3L 1219572 1219622 chr3L 1227327 1227378 412 31 7757 7.0 8.0 7.5 3.6 7806 chr3L 1219572 intron mwh + chr3L 1223475 intron mwh + chr3L 1227378 intron mwh + chr3L_31_1220001 chr3L_1220001 D9 1183 chr3L 1257630 1257649 chr3L 1257735 1257754 7 105 0.0 3.5 1.8 2.5 124 chr3L 1257630 intron CG9134 + chr3L 1257692 intron CG9134 + chr3L 1257754 intron CG9134 + chr3L_7_1255001 chr3L_1255001 D9 1184 chr3L 1260131 1260163 chr3L 1260236 1260268 9 105 5.0 5.5 5.2 1.5 137 chr3L 1260131 intron CG9134 + chr3L 1260200 intron CG9134 + chr3L 1260268 intron CG9134 + chr3L_9_1260001 chr3L_1260001 D9 1185 chr3L 1347134 1347190 chr3L 1347243 1347300 39 109 9.0 12.5 10.8 3.3 166 chr3L 1347134 intron Ptp61F - chr3L 1347217 intron Ptp61F - chr3L 1347300 intron Ptp61F - chr3L_39_1345001 chr3L_1345001 D9 1186 chr3L 1357096 1357152 chr3L 1357198 1357256 17 104 5.0 3.5 4.2 3.3 160 chr3L 1357096 intron Ptp61F - chr3L 1357176 intron Ptp61F - chr3L 1357256 intron Ptp61F - chr3L_17_1355001 chr3L_1355001 D9 1187 chr3L 1374410 1374420 chr3L 1374512 1374520 5 101 11.0 5.5 8.2 0.5 110 chr3L 1374410 intron,intron Ptp61F -,ru + chr3L 1374465 intron,intron Ptp61F -,ru + chr3L 1374520 intron,intron Ptp61F -,ru + chr3L_5_1370001 chr3L_1370001 D9 1188 chr3L 1385154 1385205 chr3L 1385265 1385318 15 113 3.5 2.5 3.0 3.8 164 chr3L 1385154 intron,intron Ptp61F -,ru + chr3L 1385236 intron,intron Ptp61F -,ru + chr3L 1385318 intron,intron Ptp61F -,ru + chr3L_15_1385001 chr3L_1385001 D9 1189 chr3L 1396733 1396759 chr3L 1396835 1396864 13 104 5.5 8.0 6.8 1.7 131 chr3L 1396733 intron Ptp61F - chr3L 1396798 intron Ptp61F - chr3L 1396864 intron Ptp61F - chr3L_13_1395001 chr3L_1395001 D9 1190 chr3L 1424757 1424767 chr3L 1430026 1430036 Rt1a 6 5269 0.5 14.5 7.5 0.7 5279 chr3L 1424757 intron Ptp61F - chr3L 1427396 intron Ptp61F - chr3L 1430036 intron Ptp61F - chr3L_6_1425001 chr3L_1425001 D9 1191 chr3L 1485715 1485738 chr3L 1486909 1486930 1360 14 1191 9.0 22.0 15.5 0.8 1215 chr3L 1485715 intron stet - chr3L 1486322 intron stet - chr3L 1486930 intron stet - chr3L_14_1485001 chr3L_1485001 D9 1192 chr3L 1505978 1506027 chr3L 1513600 1513649 17.6 23 7622 6.0 8.0 7.0 2.9 7671 chr3L 1505978 intron,intron Psa +,cue - chr3L 1509814 intron,intron Psa +,cue - chr3L 1513649 intron,intron Psa +,cue - chr3L_23_1505001 chr3L_1505001 D9 1193 chr3L 1639208 1639242 chr3L 1639414 1639448 9 206 2.5 9.5 6.0 1.3 240 chr3L 1639208 5` UTR metl - chr3L 1639328 intergenic metl -,Bgb + chr3L 1639448 intergenic metl -,Bgb + chr3L_9_1635001 chr3L_1635001 D9 1194 chr3L 1684000 1684046 chr3L 1684102 1684149 20 99 3.5 5.0 4.2 3.8 149 chr3L 1684000 intron CG7991 + chr3L 1684074 intron CG7991 + chr3L 1684149 intron CG7991 + chr3L_20_1680001 chr3L_1680001 D9 1195 chr3L 1848614 1848670 chr3L 1848717 1848773 15 102 0.5 3.0 1.8 5.4 159 chr3L 1848614 intergenic not near genes chr3L 1848694 intergenic not near genes chr3L 1848773 intergenic not near genes chr3L_15_1845001 chr3L_1845001 D9 1196 chr3L 1853020 1853038 chr3L 1853129 1853147 5 109 2.0 2.5 2.2 1.6 127 chr3L 1853020 intron CG13936 - chr3L 1853084 intron CG13936 - chr3L 1853147 intron CG13936 - chr3L_5_1850001 chr3L_1850001 D9 1197 chr3L 1922418 1922443 chr3L 1922523 1922548 15 105 6.0 12.0 9.0 1.5 130 chr3L 1922418 intron Dbx + chr3L 1922483 intron Dbx + chr3L 1922548 intron Dbx + chr3L_15_1920001 chr3L_1920001 D9 1198 chr3L 1978701 1978745 chr3L 1978899 1978942 19 197 43.0 48.0 45.5 0.4 241 chr3L 1978701 intergenic not near genes chr3L 1978822 intergenic not near genes chr3L 1978942 intergenic not near genes chr3L_19_1975001 chr3L_1975001 D9 1199 chr3L 2006471 2006502 chr3L 2006576 2006607 15 105 3.5 13.5 8.5 1.6 136 chr3L 2006471 intergenic not near genes chr3L 2006539 intergenic not near genes chr3L 2006607 intergenic not near genes chr3L_15_2005001 chr3L_2005001 D9 1200 chr3L 2139181 2139234 chr3L 2139287 2139340 21 105 2.0 9.5 5.8 3.1 159 chr3L 2139181 intron zormin - chr3L 2139260 intron zormin - chr3L 2139340 intron zormin - chr3L_21_2135001 chr3L_2135001 D9 1201 chr3L 2168756 2168801 chr3L 2168872 2168917 23 116 9.0 7.0 8.0 2.6 161 chr3L 2168756 exon CG15879 - chr3L 2168836 intron CG15879 - chr3L 2168917 intron CG15879 - chr3L_23_2165001 chr3L_2165001 D9 1202 chr3L 2181153 2181201 chr3L 2181257 2181301 20 102 2.5 10.5 6.5 2.7 148 chr3L 2181153 intergenic not near genes chr3L 2181227 intergenic not near genes chr3L 2181301 intergenic not near genes chr3L_20_2180001 chr3L_2180001 D9 1203 chr3L 2199788 2199821 chr3L 2199886 2199922 19 101 2.5 8.0 5.2 3.1 134 chr3L 2199788 intergenic not near genes chr3L 2199855 intergenic not near genes chr3L 2199922 intergenic not near genes chr3L_19_2195001 chr3L_2195001 D9 1204 chr3L 2277956 2278006 chr3L 2278175 2278224 19 221 4.5 2.0 3.2 4.5 268 chr3L 2277956 3` UTR yellow-g2 + chr3L 2278090 intergenic yellow-g2 + chr3L 2278224 intergenic yellow-g2 + chr3L_19_2275001 chr3L_2275001 D9 1205 chr3L 2307977 2308031 chr3L 2308108 2308160 15 128 4.0 4.0 4.0 3.0 183 chr3L 2307977 intergenic not near genes chr3L 2308068 intergenic not near genes chr3L 2308160 intergenic not near genes chr3L_15_2305001 chr3L_2305001 D9 1206 chr3L 2310123 2310177 chr3L 2310891 2310945 19 768 6.0 2.0 4.0 3.8 822 chr3L 2310123 intergenic not near genes chr3L 2310534 intergenic not near genes chr3L 2310945 intergenic not near genes chr3L_19_2310001 chr3L_2310001 D9 1207 chr3L 2316662 2316716 chr3L 2316772 2316825 16 109 8.0 4.5 6.2 2.2 163 chr3L 2316662 intergenic CR45427 - chr3L 2316744 intergenic CR45427 - chr3L 2316825 intergenic CR45427 - chr3L_16_2315001 chr3L_2315001 D9 1208 chr3L 2331557 2331616 chr3L 2331659 2331718 14 102 3.5 5.5 4.5 2.5 161 chr3L 2331557 intron MsR1 + chr3L 2331638 intron MsR1 + chr3L 2331718 intron MsR1 + chr3L_14_2330001 chr3L_2330001 D9 1209 chr3L 2355423 2355465 chr3L 2355635 2355678 9 213 3.0 0.0 1.5 3.6 255 chr3L 2355423 intergenic not near genes chr3L 2355550 intergenic not near genes chr3L 2355678 intergenic not near genes chr3L_9_2355001 chr3L_2355001 D9 1210 chr3L 2356039 2356074 chr3L 2356152 2356187 10 112 4.5 2.0 3.2 2.4 148 chr3L 2356039 intergenic not near genes chr3L 2356113 intergenic not near genes chr3L 2356187 intergenic not near genes chr3L_10_2355001 chr3L_2355001 D9 1211 chr3L 2411311 2411344 chr3L 2411416 2411449 17 105 4.0 8.5 6.2 2.4 138 chr3L 2411311 intron CG45186 + chr3L 2411380 intron CG45186 + chr3L 2411449 intron CG45186 + chr3L_17_2410001 chr3L_2410001 D9 1212 chr3L 2429044 2429074 chr3L 2429161 2429192 14 118 6.5 9.0 7.8 1.6 148 chr3L 2429044 intron CG45186 + chr3L 2429118 intron CG45186 + chr3L 2429192 intron CG45186 + chr3L_14_2425001 chr3L_2425001 D9 1213 chr3L 2433471 2433526 chr3L 2433579 2433634 16 108 3.5 2.0 2.8 4.2 163 chr3L 2433471 intron CG45186 + chr3L 2433552 intron CG45186 + chr3L 2433634 intron CG45186 + chr3L_16_2430001 chr3L_2430001 D9 1214 chr3L 2447481 2447531 chr3L 2456662 2456712 roo 24 9180 5.5 5.5 5.5 3.7 9231 chr3L 2447481 intron CG45186 + chr3L 2452096 intron CG45186 + chr3L 2456712 intron CG45186 + chr3L_24_2450001 chr3L_2450001 D9 1215 chr3L 2467431 2467486 chr3L 2467551 2467608 5 121 2.5 3.0 2.8 1.3 177 chr3L 2467431 intron CG45186 + chr3L 2467520 intron CG45186 + chr3L 2467608 intron CG45186 + chr3L_5_2465001 chr3L_2465001 D9 1216 chr3L 2515417 2515430 chr3L 2515524 2515537 8 107 1.0 19.5 10.2 0.7 120 chr3L 2515417 intron Spn - chr3L 2515477 intron Spn - chr3L 2515537 intron Spn - chr3L_8_2515001 chr3L_2515001 D9 1217 chr3L 2520628 2520676 chr3L 2520749 2520797 15 121 7.0 6.5 6.8 1.9 169 chr3L 2520628 intron Spn - chr3L 2520712 intron Spn - chr3L 2520797 intron Spn - chr3L_15_2520001 chr3L_2520001 D9 1218 chr3L 2533630 2533680 chr3L 2533736 2533784 23 104 8.5 16.5 12.5 1.7 154 chr3L 2533630 intron Spn - chr3L 2533707 intron Spn - chr3L 2533784 intron Spn - chr3L_23_2530001 chr3L_2530001 D9 1219 chr3L 2548238 2548284 chr3L 2548352 2548398 20 113 7.0 6.5 6.8 2.6 160 chr3L 2548238 intron Spn - chr3L 2548318 intron Spn - chr3L 2548398 intron Spn - chr3L_20_2545001 chr3L_2545001 D9 1220 chr3L 2551743 2551795 chr3L 2553567 2553619 15 1824 22.0 51.0 36.5 0.4 1876 chr3L 2551743 intron Spn - chr3L 2552681 intron Spn - chr3L 2553619 intron Spn - chr3L_15_2550001 chr3L_2550001 D9 1221 chr3L 2561506 2561561 chr3L 2561608 2561663 9 102 2.5 3.0 2.8 2.4 157 chr3L 2561506 intron msn - chr3L 2561584 intron msn - chr3L 2561663 intron msn - chr3L_9_2560001 chr3L_2560001 D9 1222 chr3L 2626064 2626100 chr3L 2626190 2626226 12 124 6.0 8.5 7.2 1.5 162 chr3L 2626064 intron Pxn - chr3L 2626145 intron Pxn - chr3L 2626226 intron Pxn - chr3L_12_2625001 chr3L_2625001 D9 1223 chr3L 2795701 2795746 chr3L 2795849 2795894 18 148 4.0 5.0 4.5 3.3 193 chr3L 2795701 intron CG43444 - chr3L 2795798 intron CG43444 - chr3L 2795894 intron CG43444 - chr3L_18_2795001 chr3L_2795001 D9 1224 chr3L 2835860 2835868 chr3L 2835965 2835973 7 104 13.5 15.0 14.2 0.5 113 chr3L 2835860 intron CG43444 - chr3L 2835916 intron CG43444 - chr3L 2835973 intron CG43444 - chr3L_7_2835001 chr3L_2835001 D9 1225 chr3L 2882103 2882141 chr3L 2882204 2882240 8 100 6.0 2.5 4.2 1.5 137 chr3L 2882103 intergenic not near genes chr3L 2882172 intergenic not near genes chr3L 2882240 intergenic not near genes chr3L_8_2880001 chr3L_2880001 D9 1226 chr3L 2927816 2927858 chr3L 2936118 2936160 Tirant 9 8302 4.0 1.5 2.8 2.4 8344 chr3L 2927816 intron Shab + chr3L 2931988 intron Shab + chr3L 2936160 intron Shab + chr3L_9_2930001 chr3L_2930001 D9 1227 chr3L 2987706 2987756 chr3L 2987992 2988043 20 287 6.5 5.5 6.0 2.9 337 chr3L 2987706 intergenic not near genes chr3L 2987874 intergenic not near genes chr3L 2988043 intergenic not near genes chr3L_20_2985001 chr3L_2985001 D9 1228 chr3L 3028320 3028370 chr3L 3028424 3028459 23 103 7.5 6.0 6.8 2.9 139 chr3L 3028320 intergenic not near genes chr3L 3028390 intergenic not near genes chr3L 3028459 intergenic not near genes chr3L_23_3025001 chr3L_3025001 D9 1229 chr3L 3029011 3029021 chr3L 3029120 3029132 4 110 2.0 3.0 2.5 1.1 121 chr3L 3029011 intergenic not near genes chr3L 3029072 intergenic not near genes chr3L 3029132 intergenic not near genes chr3L_4_3025001 chr3L_3025001 D9 1230 chr3L 3040301 3040355 chr3L 3042115 3042169 S-element 8 1813 6.0 1.0 3.5 1.8 1868 chr3L 3040301 3` UTR CG2162 + chr3L 3041235 intergenic not near genes chr3L 3042169 intergenic Jafrac2 + chr3L_8_3040001 chr3L_3040001 D9 1231 chr3L 3050875 3050883 chr3L 3050987 3050995 5 112 6.5 8.5 7.5 0.6 120 chr3L 3050875 intron CG32485 + chr3L 3050935 intron CG32485 + chr3L 3050995 intron CG32485 + chr3L_5_3050001 chr3L_3050001 D9 1232 chr3L 3051718 3051746 chr3L 3051985 3052004 pogo 12 265 11.0 3.5 7.2 1.5 286 chr3L 3051718 3` UTR CG32485 + chr3L 3051861 intergenic CG32485 + chr3L 3052004 intergenic CG32485 + chr3L_12_3050001 chr3L_3050001 D9 1233 chr3L 3061259 3061315 chr3L 3069867 3069923 Tirant 24 8608 7.5 6.0 6.8 3.1 8664 chr3L 3061259 intron CG32486 - chr3L 3065591 intron CG32486 - chr3L 3069923 intron CG32486 - chr3L_24_3065001 chr3L_3065001 D9 1234 chr3L 3165323 3165382 chr3L 3165431 3165485 27 107 7.0 5.0 6.0 3.9 162 chr3L 3165323 intron,intron Asciz -,CG32280 + chr3L 3165404 intron,intron Asciz -,CG32280 + chr3L 3165485 intron,intron Asciz -,CG32280 + chr3L_27_3165001 chr3L_3165001 D9 1235 chr3L 3178718 3178746 chr3L 3178823 3178854 14 108 4.0 4.0 4.0 2.8 136 chr3L 3178718 intergenic CG14964 -,Girdin + chr3L 3178786 intergenic Girdin +,CG14964 - chr3L 3178854 intergenic Girdin +,CG14964 - chr3L_14_3175001 chr3L_3175001 D9 1236 chr3L 3281420 3281438 chr3L 3281941 3281959 Doc 6 521 20.5 10.0 15.2 0.4 539 chr3L 3281420 intron CG12017 + chr3L 3281690 intron CG12017 + chr3L 3281959 intron CG12017 + chr3L_6_3280001 chr3L_3280001 D9 1237 chr3L 3281440 3281470 chr3L 3281937 3281991 Doc 19 515 13.0 9.0 11.0 1.6 551 chr3L 3281440 intron CG12017 + chr3L 3281716 intron CG12017 + chr3L 3281991 intron CG12017 + chr3L_19_3280001 chr3L_3280001 D9 1238 chr3L 3310275 3310324 chr3L 3310379 3310428 8 104 4.5 4.5 4.5 1.5 153 chr3L 3310275 intron ZnT63C + chr3L 3310352 intron ZnT63C + chr3L 3310428 intron ZnT63C + chr3L_8_3310001 chr3L_3310001 D9 1239 chr3L 3314143 3314200 chr3L 3314277 3314334 41 133 4.5 8.5 6.5 5.5 191 chr3L 3314143 intergenic ZnT63C +,Drsl2 + chr3L 3314238 intergenic Drsl2 +,ZnT63C + chr3L 3314334 intergenic Drsl2 +,ZnT63C + chr3L_41_3310001 chr3L_3310001 D9 1240 chr3L 3317507 3317562 chr3L 3317611 3317666 16 104 0.0 2.5 1.2 7.3 159 chr3L 3317507 intergenic Drsl5 + chr3L 3317586 intergenic PIG-C -,Drsl5 + chr3L 3317666 intergenic PIG-C - chr3L_16_3315001 chr3L_3315001 D9 1241 chr3L 3412971 3412993 chr3L 3413071 3413094 24 100 0.5 16.5 8.5 2.5 123 chr3L 3412971 intron sty - chr3L 3413032 intron sty - chr3L 3413094 intron sty - chr3L_24_3410001 chr3L_3410001 D9 1242 chr3L 3436266 3436310 chr3L 3436370 3436414 11 104 6.0 4.0 5.0 1.8 148 chr3L 3436266 intron eIF5B - chr3L 3436340 intron eIF5B - chr3L 3436414 intron eIF5B - chr3L_11_3435001 chr3L_3435001 D9 1243 chr3L 3470132 3470186 chr3L 3470233 3470287 7 101 0.0 3.0 1.5 2.8 155 chr3L 3470132 intron CG14971 - chr3L 3470210 intron CG14971 - chr3L 3470287 intron CG14971 - chr3L_7_3470001 chr3L_3470001 D9 1244 chr3L 3475054 3475095 chr3L 3475523 3475564 jockey 20 468 7.0 9.5 8.2 2.2 510 chr3L 3475054 intron CG42324 + chr3L 3475309 intron CG42324 + chr3L 3475564 intron CG42324 + chr3L_20_3475001 chr3L_3475001 D9 1245 chr3L 3500119 3500176 chr3L 3500233 3500289 43 113 7.0 4.5 5.8 6.3 170 chr3L 3500119 intron CG42324 + chr3L 3500204 intron CG42324 + chr3L 3500289 intron CG42324 + chr3L_43_3500001 chr3L_3500001 D9 1246 chr3L 3565920 3565969 chr3L 3566021 3566070 22 101 6.5 7.0 6.8 2.8 150 chr3L 3565920 intron Eip63E + chr3L 3565995 intron Eip63E + chr3L 3566070 intron Eip63E + chr3L_22_3565001 chr3L_3565001 D9 1247 chr3L 3566377 3566429 chr3L 3566485 3566535 9 107 2.5 4.5 3.5 2.0 158 chr3L 3566377 intron Eip63E + chr3L 3566456 intron Eip63E + chr3L 3566535 intron Eip63E + chr3L_9_3565001 chr3L_3565001 D9 1248 chr3L 3601274 3601329 chr3L 3606610 3606665 copia 13 5336 1.5 2.0 1.8 4.6 5391 chr3L 3601274 intron Eip63E + chr3L 3603970 intron Eip63E + chr3L 3606665 intron Eip63E + chr3L_13_3600001 chr3L_3600001 D9 1249 chr3L 3620744 3620792 chr3L 3620859 3620898 17 112 4.5 1.0 2.8 4.5 154 chr3L 3620744 exon CG14974 - chr3L 3620821 intron CG14974 - chr3L 3620898 exon CG14974 - chr3L_17_3620001 chr3L_3620001 D9 1250 chr3L 3709432 3709455 chr3L 3709539 3709544 6 104 7.5 0.0 3.8 1.2 112 chr3L 3709432 intergenic CR45675 + chr3L 3709488 intergenic CR45675 + chr3L 3709544 intergenic not near genes chr3L_6_3705001 chr3L_3705001 D9 1251 chr3L 3766726 3766738 chr3L 3766837 3766847 4 110 4.0 0.0 2.0 1.3 121 chr3L 3766726 intron CG32264 - chr3L 3766786 intron CG32264 - chr3L 3766847 intron CG32264 - chr3L_4_3765001 chr3L_3765001 D9 1252 chr3L 3783253 3783289 chr3L 3783352 3783390 6 97 0.0 3.5 1.8 2.1 137 chr3L 3783253 intron CG32264 - chr3L 3783322 intron CG32264 - chr3L 3783390 intron CG32264 - chr3L_6_3780001 chr3L_3780001 D9 1253 chr3L 3797379 3797418 chr3L 3797543 3797582 14 164 4.0 4.0 4.0 2.8 203 chr3L 3797379 intron CG32264 - chr3L 3797480 intron CG32264 - chr3L 3797582 intron CG32264 - chr3L_14_3795001 chr3L_3795001 D9 1254 chr3L 3798014 3798069 chr3L 3798119 3798174 11 105 4.0 2.5 3.2 2.6 160 chr3L 3798014 intron CG32264 - chr3L 3798094 intron CG32264 - chr3L 3798174 intron CG32264 - chr3L_11_3795001 chr3L_3795001 D9 1255 chr3L 3833715 3833746 chr3L 3833981 3834012 pogo 5 266 11.5 2.0 6.8 0.6 297 chr3L 3833715 intron enc + chr3L 3833864 intron enc + chr3L 3834012 intron enc + chr3L_5_3830001 chr3L_3830001 D9 1256 chr3L 4015710 4015763 chr3L 4015818 4015871 12 108 5.0 1.5 3.2 2.9 161 chr3L 4015710 intergenic not near genes chr3L 4015790 intergenic not near genes chr3L 4015871 intergenic not near genes chr3L_12_4015001 chr3L_4015001 D9 1257 chr3L 4146806 4146835 chr3L 4146913 4146942 7 107 0.0 5.0 2.5 2.0 136 chr3L 4146806 intergenic not near genes chr3L 4146874 intergenic not near genes chr3L 4146942 intergenic not near genes chr3L_7_4145001 chr3L_4145001 D9 1258 chr3L 4229705 4229759 chr3L 4229825 4229879 27 119 8.5 5.0 6.8 3.5 174 chr3L 4229705 intron ImpL2 - chr3L 4229792 intron ImpL2 - chr3L 4229879 intron ImpL2 - chr3L_27_4225001 chr3L_4225001 D9 1259 chr3L 4754743 4754770 chr3L 4754842 4754871 4 100 5.5 4.0 4.8 0.7 128 chr3L 4754743 intron RhoGEF64C + chr3L 4754807 intron RhoGEF64C + chr3L 4754871 intron RhoGEF64C + chr3L_4_4750001 chr3L_4750001 D9 1260 chr3L 4774907 4774965 chr3L 4775031 4775089 5 124 6.5 5.0 5.8 0.7 182 chr3L 4774907 intron RhoGEF64C + chr3L 4774998 intron RhoGEF64C + chr3L 4775089 intron RhoGEF64C + chr3L_5_4770001 chr3L_4770001 D9 1261 chr3L 4837862 4837921 chr3L 4837966 4838025 16 104 2.5 4.5 3.5 3.6 163 chr3L 4837862 3` UTR CG13707 - chr3L 4837944 3` UTR CG13707 - chr3L 4838025 3` UTR CG13707 - chr3L_16_4835001 chr3L_4835001 D9 1262 chr3L 4840405 4840423 chr3L 4840511 4840557 15 132 0.0 6.5 3.2 3.6 152 chr3L 4840405 intergenic CG13707 - chr3L 4840481 intergenic CG13707 - chr3L 4840557 intergenic CG13707 - chr3L_15_4840001 chr3L_4840001 D9 1263 chr3L 4858282 4858335 chr3L 4858397 4858450 38 115 6.5 15.5 11.0 3.2 168 chr3L 4858282 intergenic not near genes chr3L 4858366 intergenic not near genes chr3L 4858450 intergenic not near genes chr3L_38_4855001 chr3L_4855001 D9 1264 chr3L 4901107 4901159 chr3L 4907322 4907374 diver 17 6215 2.5 5.0 3.8 3.5 6267 chr3L 4901107 intergenic CG13704 + chr3L 4904240 intergenic not near genes chr3L 4907374 intergenic not near genes chr3L_17_4900001 chr3L_4900001 D9 1265 chr3L 4941806 4941861 chr3L 4942114 4942169 16 308 4.5 3.0 3.8 3.3 363 chr3L 4941806 intron Con - chr3L 4941988 intron Con - chr3L 4942169 intron Con - chr3L_16_4940001 chr3L_4940001 D9 1266 chr3L 4942699 4942758 chr3L 4942804 4942863 23 105 7.5 4.0 5.8 3.4 164 chr3L 4942699 intron Con - chr3L 4942781 intron Con - chr3L 4942863 intron Con - chr3L_23_4940001 chr3L_4940001 D9 1267 chr3L 4989173 4989184 chr3L 4989288 4989299 5 115 0.0 0.0 0.0 5.0 126 chr3L 4989173 intron Con - chr3L 4989236 intron Con - chr3L 4989299 intron Con - chr3L_5_4985001 chr3L_4985001 D9 1268 chr3L 5034136 5034168 chr3L 5043313 5043345 roo 5 9177 9.5 0.0 4.8 0.9 9209 chr3L 5034136 intron Con - chr3L 5038740 intron Con - chr3L 5043345 intron Con - chr3L_5_5035001 chr3L_5035001 D9 1269 chr3L 5045434 5045481 chr3L 5050238 5050285 Doc 10 4806 4.0 5.5 4.8 1.7 4851 chr3L 5045434 intron Con - chr3L 5047860 intron Con - chr3L 5050285 intron Con - chr3L_10_5045001 chr3L_5045001 D9 1270 chr3L 5054920 5054969 chr3L 5055025 5055073 28 101 10.5 8.5 9.5 2.7 153 chr3L 5054920 intron Con - chr3L 5054996 intron Con - chr3L 5055073 intron Con - chr3L_28_5050001 chr3L_5050001 D9 1271 chr3L 5081829 5081880 chr3L 5081933 5081981 17 103 8.5 9.0 8.8 1.7 152 chr3L 5081829 intergenic not near genes chr3L 5081905 intergenic not near genes chr3L 5081981 intergenic not near genes chr3L_17_5080001 chr3L_5080001 D9 1272 chr3L 5104472 5104506 chr3L 5124629 5124665 8 20159 1.0 5.5 3.2 1.9 20193 chr3L 5104472 intergenic not near genes chr3L 5114568 intergenic not near genes chr3L 5124665 intergenic not near genes chr3L_8_5110001 chr3L_5110001 D9 1273 chr3L 5164611 5164670 chr3L 5164712 5164771 21 101 2.5 3.0 2.8 5.5 160 chr3L 5164611 intron shep - chr3L 5164691 intron shep - chr3L 5164771 intron shep - chr3L_21_5160001 chr3L_5160001 D9 1274 chr3L 5177637 5177676 chr3L 5177759 5177797 11 122 3.5 5.5 4.5 2.0 160 chr3L 5177637 intron shep - chr3L 5177717 intron shep - chr3L 5177797 intron shep - chr3L_11_5175001 chr3L_5175001 D9 1275 chr3L 5485241 5485281 chr3L 5485573 5485613 10 329 1.5 1.0 1.2 4.5 372 chr3L 5485241 intergenic not near genes chr3L 5485427 intergenic not near genes chr3L 5485613 intergenic not near genes chr3L_10_5485001 chr3L_5485001 D9 1276 chr3L 5498366 5498416 chr3L 5498480 5498518 8 112 0.0 4.0 2.0 2.7 152 chr3L 5498366 exon blanks - chr3L 5498442 exon blanks - chr3L 5498518 exon blanks - chr3L_8_5495001 chr3L_5495001 D9 1277 chr3L 5527605 5527639 chr3L 5527735 5527766 10 128 25.0 28.0 26.5 0.4 161 chr3L 5527605 intron Lkr - chr3L 5527686 intron Lkr - chr3L 5527766 intron Lkr - chr3L_10_5525001 chr3L_5525001 D9 1278 chr3L 5537721 5537731 chr3L 5538088 5538098 jockey 6 367 6.0 6.0 6.0 0.9 377 chr3L 5537721 intergenic not near genes chr3L 5537910 intergenic CG10625 - chr3L 5538098 intergenic CG10625 - chr3L_6_5535001 chr3L_5535001 D9 1279 chr3L 5581452 5581493 chr3L 5581563 5581604 13 109 3.5 9.0 6.2 1.8 152 chr3L 5581452 intergenic not near genes chr3L 5581528 intergenic not near genes chr3L 5581604 intergenic not near genes chr3L_13_5580001 chr3L_5580001 D9 1280 chr3L 5677149 5677200 chr3L 5677250 5677298 5 100 0.0 3.0 1.5 2.0 149 chr3L 5677149 intron sif + chr3L 5677224 intron sif + chr3L 5677298 intron sif + chr3L_5_5675001 chr3L_5675001 D9 1281 chr3L 5849239 5849295 chr3L 5849347 5849405 33 110 6.0 8.0 7.0 4.1 166 chr3L 5849239 intergenic not near genes chr3L 5849322 intergenic not near genes chr3L 5849405 intergenic not near genes chr3L_33_5845001 chr3L_5845001 D9 1282 chr3L 5910007 5910031 chr3L 5910273 5910297 pogo 15 266 13.5 0.0 6.8 1.9 290 chr3L 5910007 intron CG13288 + chr3L 5910152 intron CG13288 + chr3L 5910297 intron CG13288 + chr3L_15_5910001 chr3L_5910001 D9 1283 chr3L 5910358 5910412 chr3L 5910819 5910873 49 461 5.5 8.5 7.0 6.1 515 chr3L 5910358 intron CG13288 + chr3L 5910616 intron CG13288 + chr3L 5910873 intron CG13288 + chr3L_49_5910001 chr3L_5910001 D9 1284 chr3L 5909515 5909573 chr3L 5912882 5912940 40 3368 76.0 54.5 65.2 0.6 3425 chr3L 5909515 exon CG13288 + chr3L 5911228 intron CG13288 + chr3L 5912940 intron CG13288 + chr3L_40_5910001 chr3L_5910001 D9 1285 chr3L 5926294 5926340 chr3L 5926507 5926553 BS 21 213 8.5 13.0 10.8 1.8 259 chr3L 5926294 intron Vap-33B + chr3L 5926424 intron Vap-33B + chr3L 5926553 intron Vap-33B + chr3L_21_5925001 chr3L_5925001 D9 1286 chr3L 5937198 5937246 chr3L 5937330 5937378 17 132 6.5 10.0 8.2 1.8 180 chr3L 5937198 intron CG33993 - chr3L 5937288 intron CG33993 - chr3L 5937378 intron CG33993 - chr3L_17_5935001 chr3L_5935001 D9 1287 chr3L 5983813 5983861 chr3L 5983958 5984005 5 145 8.5 0.0 4.2 1.0 192 chr3L 5983813 3` UTR CR45439 - chr3L 5983909 intergenic CR45439 -,CR45440 - chr3L 5984005 intergenic CR45440 -,CR45439 - chr3L_5_5980001 chr3L_5980001 D9 1288 chr3L 6001664 6001711 chr3L 6004389 6004436 jockey 12 2725 4.0 0.5 2.2 3.8 2772 chr3L 6001664 intron PVRAP + chr3L 6003050 intron PVRAP + chr3L 6004436 intron PVRAP + chr3L_12_6000001 chr3L_6000001 D9 1289 chr3L 6040246 6040282 chr3L 6040351 6040387 10 103 7.0 0.0 3.5 2.2 141 chr3L 6040246 intergenic Jon65Aiv + chr3L 6040316 intergenic Jon65Aiv + chr3L 6040387 intergenic Jon65Aiv + chr3L_10_6040001 chr3L_6040001 D9 1290 chr3L 6040352 6040394 chr3L 6042733 6042775 Doc 6 2381 0.0 4.0 2.0 2.0 2423 chr3L 6040352 intergenic Jon65Aiv + chr3L 6041564 intergenic not near genes chr3L 6042775 intergenic not near genes chr3L_6_6040001 chr3L_6040001 D9 1291 chr3L 6052633 6052664 chr3L 6052743 6052774 26 109 21.5 25.5 23.5 1.1 141 chr3L 6052633 exon Jon65Aii + chr3L 6052704 intron Jon65Aii + chr3L 6052774 exon Jon65Aii + chr3L_26_6050001 chr3L_6050001 D9 1292 chr3L 6064992 6065035 chr3L 6065094 6065137 7 102 4.5 1.0 2.8 1.8 145 chr3L 6064992 intergenic not near genes chr3L 6065064 intergenic not near genes chr3L 6065137 intergenic not near genes chr3L_7_6065001 chr3L_6065001 D9 1293 chr3L 6119131 6119158 chr3L 6119245 6119272 14 114 7.5 4.0 5.8 2.1 141 chr3L 6119131 exon Ets65A + chr3L 6119202 intron Ets65A + chr3L 6119272 intron Ets65A + chr3L_14_6115001 chr3L_6115001 D9 1294 chr3L 6183568 6183581 chr3L 6187585 6187597 4 4016 38.0 44.0 41.0 0.1 4029 chr3L 6183568 exon D19B - chr3L 6185582 exon CG43293 + chr3L 6187597 exon D19A - chr3L_4_6185001 chr3L_6185001 D9 1295 chr3L 6220890 6220945 chr3L 6230067 6230122 roo 20 9176 3.0 1.5 2.2 6.2 9232 chr3L 6220890 5` UTR pncr008:3L + chr3L 6225506 intergenic not near genes chr3L 6230122 intergenic not near genes chr3L_20_6225001 chr3L_6225001 D9 1296 chr3L 6308443 6308495 chr3L 6308781 6308835 12 340 7.5 3.5 5.5 1.8 392 chr3L 6308443 intergenic not near genes chr3L 6308639 intergenic not near genes chr3L 6308835 intergenic not near genes chr3L_12_6305001 chr3L_6305001 D9 1297 chr3L 6334987 6335038 chr3L 6335482 6335534 297 15 496 4.0 3.0 3.5 3.3 547 chr3L 6334987 intron CG13300 - chr3L 6335260 intron CG13300 - chr3L 6335534 intron CG13300 - chr3L_15_6335001 chr3L_6335001 D9 1298 chr3L 6353352 6353409 chr3L 6353457 6353471 28 97 6.5 6.0 6.2 3.9 119 chr3L 6353352 intergenic not near genes chr3L 6353412 intergenic not near genes chr3L 6353471 intergenic not near genes chr3L_28_6350001 chr3L_6350001 D9 1299 chr3L 6405649 6405674 chr3L 6432135 6432163 roo 9 26489 3.5 4.0 3.8 1.9 26514 chr3L 6405649 intron CG42747 + chr3L 6418906 intron CG42747 + chr3L 6432163 intron CG42747 + chr3L_9_6415001 chr3L_6415001 D9 1300 chr3L 6573629 6573685 chr3L 6573757 6573813 24 126 18.5 6.5 12.5 1.8 184 chr3L 6573629 intron,intron CG18769 +,jv - chr3L 6573721 intron,intron CG18769 +,jv - chr3L 6573813 intron,intron CG18769 +,jv - chr3L_24_6570001 chr3L_6570001 D9 1301 chr3L 6620591 6620603 chr3L 6621054 6621069 Rt1c 9 465 3.5 16.0 9.8 0.8 478 chr3L 6620591 intergenic not near genes chr3L 6620830 intergenic not near genes chr3L 6621069 intergenic not near genes chr3L_9_6620001 chr3L_6620001 D9 1302 chr3L 6623458 6623507 chr3L 6623579 6623628 30 120 5.0 3.5 4.2 5.8 170 chr3L 6623458 intergenic not near genes chr3L 6623543 intergenic GluRIA + chr3L 6623628 intergenic GluRIA + chr3L_30_6620001 chr3L_6620001 D9 1303 chr3L 6652706 6652758 chr3L 6652825 6652877 15 119 6.5 2.0 4.2 2.9 171 chr3L 6652706 intergenic not near genes chr3L 6652792 intergenic not near genes chr3L 6652877 intergenic not near genes chr3L_15_6650001 chr3L_6650001 D9 1304 chr3L 6660974 6661029 chr3L 6661078 6661133 29 104 13.0 15.5 14.2 1.9 159 chr3L 6660974 intergenic not near genes chr3L 6661054 intergenic not near genes chr3L 6661133 intergenic not near genes chr3L_29_6660001 chr3L_6660001 D9 1305 chr3L 6681325 6681369 chr3L 6681427 6681471 16 101 5.5 3.0 4.2 3.1 146 chr3L 6681325 intergenic not near genes chr3L 6681398 intergenic not near genes chr3L 6681471 intergenic not near genes chr3L_16_6680001 chr3L_6680001 D9 1306 chr3L 6727766 6727809 chr3L 6727889 6727932 31 123 6.5 8.5 7.5 3.6 166 chr3L 6727766 intergenic CR45417 + chr3L 6727849 intergenic CR45417 + chr3L 6727932 intergenic CR45417 + chr3L_31_6725001 chr3L_6725001 D9 1307 chr3L 6781106 6781153 chr3L 6783141 6783188 Doc 4 2036 1.5 0.0 0.8 2.2 2082 chr3L 6781106 intergenic not near genes chr3L 6782147 intergenic not near genes chr3L 6783188 intergenic not near genes chr3L_4_6780001 chr3L_6780001 D9 1308 chr3L 6798626 6798681 chr3L 6798925 6798980 24 299 7.5 7.0 7.2 2.9 354 chr3L 6798626 intergenic not near genes chr3L 6798803 intergenic not near genes chr3L 6798980 intergenic not near genes chr3L_24_6795001 chr3L_6795001 D9 1309 chr3L 6835907 6835922 chr3L 6836010 6836025 7 103 2.5 6.0 4.2 1.3 118 chr3L 6835907 intergenic not near genes chr3L 6835966 intergenic not near genes chr3L 6836025 intergenic not near genes chr3L_7_6835001 chr3L_6835001 D9 1310 chr3L 6844345 6844385 chr3L 6844516 6844556 5 171 3.0 3.5 3.2 1.2 211 chr3L 6844345 intergenic not near genes chr3L 6844450 intergenic not near genes chr3L 6844556 intergenic not near genes chr3L_5_6840001 chr3L_6840001 D9 1311 chr3L 6855907 6855953 chr3L 6860716 6860762 Doc 17 4808 5.0 7.5 6.2 2.4 4855 chr3L 6855907 intergenic not near genes chr3L 6858334 intergenic not near genes chr3L 6860762 intergenic not near genes chr3L_17_6855001 chr3L_6855001 D9 1312 chr3L 6865415 6865454 chr3L 6865534 6865575 5 120 0.0 0.0 0.0 5.0 160 chr3L 6865415 intergenic CR45115 - chr3L 6865495 3` UTR CR45115 - chr3L 6865575 3` UTR CR45115 - chr3L_5_6865001 chr3L_6865001 D9 1313 chr3L 6887495 6887541 chr3L 6895011 6895058 roo 8 7517 4.0 0.0 2.0 2.7 7563 chr3L 6887495 intergenic not near genes chr3L 6891276 intergenic not near genes chr3L 6895058 intergenic not near genes chr3L_8_6890001 chr3L_6890001 D9 1314 chr3L 6900895 6900928 chr3L 6901182 6901215 11 287 4.0 4.0 4.0 2.2 320 chr3L 6900895 intergenic not near genes chr3L 6901055 intergenic not near genes chr3L 6901215 intergenic not near genes chr3L_11_6900001 chr3L_6900001 D9 1315 chr3L 6934322 6934353 chr3L 6934458 6934489 9 136 4.0 2.5 3.2 2.1 167 chr3L 6934322 exon CG14820 + chr3L 6934406 intron CG14820 + chr3L 6934489 exon CG14820 + chr3L_9_6930001 chr3L_6930001 D9 1316 chr3L 6981922 6981938 chr3L 6982099 6982117 5 179 0.0 2.5 1.2 2.3 195 chr3L 6981922 intergenic not near genes chr3L 6982020 intergenic not near genes chr3L 6982117 intergenic not near genes chr3L_5_6980001 chr3L_6980001 D9 1317 chr3L 6994888 6994914 chr3L 6995524 6995550 BS 5 636 0.0 5.5 2.8 1.3 662 chr3L 6994888 intergenic bin + chr3L 6995219 intergenic not near genes chr3L 6995550 intergenic not near genes chr3L_5_6995001 chr3L_6995001 D9 1318 chr3L 7001970 7001974 chr3L 7002116 7002120 4 146 6.0 5.0 5.5 0.6 150 chr3L 7001970 intron Mp + chr3L 7002045 intron Mp + chr3L 7002120 intron Mp + chr3L_4_7000001 chr3L_7000001 D9 1319 chr3L 7033154 7033205 chr3L 7033259 7033312 35 105 10.5 12.5 11.5 2.8 158 chr3L 7033154 intron Mp + chr3L 7033233 intron Mp + chr3L 7033312 intron Mp + chr3L_35_7030001 chr3L_7030001 D9 1320 chr3L 7040658 7040679 chr3L 7040764 7040770 4 102 5.5 0.0 2.8 1.1 112 chr3L 7040658 intron Mp + chr3L 7040714 intron Mp + chr3L 7040770 intron Mp + chr3L_4_7040001 chr3L_7040001 D9 1321 chr3L 7041902 7041924 chr3L 7042005 7042027 11 102 6.0 3.5 4.8 1.9 125 chr3L 7041902 intron Mp + chr3L 7041964 intron Mp + chr3L 7042027 intron Mp + chr3L_11_7040001 chr3L_7040001 D9 1322 chr3L 7085147 7085190 chr3L 7085256 7085299 18 108 8.5 8.0 8.2 2.0 152 chr3L 7085147 intergenic not near genes chr3L 7085223 intergenic not near genes chr3L 7085299 intergenic not near genes chr3L_18_7085001 chr3L_7085001 D9 1323 chr3L 7100152 7100179 chr3L 7100253 7100279 11 100 7.0 3.0 5.0 1.8 127 chr3L 7100152 intron form3 + chr3L 7100216 intron form3 + chr3L 7100279 intron form3 + chr3L_11_7100001 chr3L_7100001 D9 1324 chr3L 7164537 7164569 chr3L 7164643 7164675 17 106 10.0 7.0 8.5 1.8 138 chr3L 7164537 intron Dscam2 - chr3L 7164606 intron Dscam2 - chr3L 7164675 intron Dscam2 - chr3L_17_7160001 chr3L_7160001 D9 1325 chr3L 7173999 7174041 chr3L 7174117 7174153 13 114 11.0 2.5 6.8 1.7 154 chr3L 7173999 intron Dscam2 - chr3L 7174076 intron Dscam2 - chr3L 7174153 intron Dscam2 - chr3L_13_7170001 chr3L_7170001 D9 1326 chr3L 7185197 7185213 chr3L 7185313 7185327 4 116 7.0 3.5 5.2 0.6 130 chr3L 7185197 intron Dscam2 - chr3L 7185262 intron Dscam2 - chr3L 7185327 intron Dscam2 - chr3L_4_7185001 chr3L_7185001 D9 1327 chr3L 7236609 7236624 chr3L 7236809 7236825 6 201 3.5 4.0 3.8 1.2 216 chr3L 7236609 intergenic CG14829 - chr3L 7236717 intergenic CG14829 - chr3L 7236825 3` UTR CG14829 - chr3L_6_7235001 chr3L_7235001 D9 1328 chr3L 7274701 7274741 chr3L 7274830 7274870 8 129 4.0 6.5 5.2 1.3 169 chr3L 7274701 intron unc-13-4A - chr3L 7274786 intron unc-13-4A - chr3L 7274870 intron unc-13-4A - chr3L_8_7270001 chr3L_7270001 D9 1329 chr3L 7285429 7285476 chr3L 7285532 7285579 8 103 1.0 6.0 3.5 1.8 150 chr3L 7285429 intron unc-13-4A - chr3L 7285504 intron unc-13-4A - chr3L 7285579 intron unc-13-4A - chr3L_8_7285001 chr3L_7285001 D9 1330 chr3L 7292084 7292098 chr3L 7292189 7292203 6 105 10.5 2.0 6.2 0.8 119 chr3L 7292084 intron unc-13-4A - chr3L 7292144 intron unc-13-4A - chr3L 7292203 intron unc-13-4A - chr3L_6_7290001 chr3L_7290001 D9 1331 chr3L 7355719 7355771 chr3L 7363601 7363655 32 7884 72.0 67.0 69.5 0.5 7936 chr3L 7355719 exon CTCF - chr3L 7359687 exon pst - chr3L 7363655 exon Sec63 + chr3L_32_7355001 chr3L_7355001 D9 1332 chr3L 7377289 7377312 chr3L 7380419 7380442 297 9 3130 7.0 1.5 4.2 1.7 3153 chr3L 7377289 intron SMSr - chr3L 7378866 intron SMSr - chr3L 7380442 intron SMSr - chr3L_9_7375001 chr3L_7375001 D9 1333 chr3L 7447926 7447979 chr3L 7448055 7448108 13 128 0.5 5.5 3.0 3.2 182 chr3L 7447926 intron CG42458 + chr3L 7448017 intron CG42458 + chr3L 7448108 exon CG42458 + chr3L_13_7445001 chr3L_7445001 D9 1334 chr3L 7498738 7498778 chr3L 7503538 7503580 F-element 11 4801 4.5 3.0 3.8 2.3 4842 chr3L 7498738 5` UTR CG8539 - chr3L 7501159 intergenic not near genes chr3L 7503580 intergenic not near genes chr3L_11_7500001 chr3L_7500001 D9 1335 chr3L 7508655 7508699 chr3L 7508764 7508808 19 109 8.0 1.0 4.5 3.5 153 chr3L 7508655 intergenic not near genes chr3L 7508732 intergenic not near genes chr3L 7508808 intergenic not near genes chr3L_19_7505001 chr3L_7505001 D9 1336 chr3L 7532887 7532944 chr3L 7532990 7533047 11 103 1.0 2.0 1.5 4.4 160 chr3L 7532887 intron lqf + chr3L 7532967 intron lqf + chr3L 7533047 intron lqf + chr3L_11_7530001 chr3L_7530001 D9 1337 chr3L 7572258 7572295 chr3L 7572370 7572405 17 112 7.0 3.0 5.0 2.8 147 chr3L 7572258 intergenic not near genes chr3L 7572332 intergenic not near genes chr3L 7572405 intergenic not near genes chr3L_17_7570001 chr3L_7570001 D9 1338 chr3L 7591119 7591179 chr3L 7591235 7591288 26 115 6.0 2.5 4.2 5.0 169 chr3L 7591119 intergenic CG7716 - chr3L 7591204 intergenic CG7716 - chr3L 7591288 intergenic CG7716 - chr3L_26_7590001 chr3L_7590001 D9 1339 chr3L 7617673 7617681 chr3L 7617807 7617814 7 133 17.0 0.0 8.5 0.7 141 chr3L 7617673 intron CG33275 + chr3L 7617744 intron CG33275 + chr3L 7617814 intron CG33275 + chr3L_7_7615001 chr3L_7615001 D9 1340 chr3L 7749471 7749471 chr3L 11777678 11777678 4 4028207 10.5 32.5 21.5 0.2 4028207 chr3L 7749471 intron,3` UTR CG32373 +,CG13685 + chr3L 9763574 5` UTR CG8177 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_4_9760001 chr3L_9760001 D9 1341 chr3L 7752534 7752560 chr3L 7752918 7752942 9 384 3.0 5.0 4.0 1.8 408 chr3L 7752534 intron CG32373 + chr3L 7752738 intron CG32373 + chr3L 7752942 intron CG32373 + chr3L_9_7750001 chr3L_7750001 D9 1342 chr3L 7775489 7775537 chr3L 7775614 7775662 30 124 7.0 4.0 5.5 4.6 173 chr3L 7775489 intron Clk - chr3L 7775576 5` UTR Clk - chr3L 7775662 intergenic Clk - chr3L_30_7775001 chr3L_7775001 D9 1343 chr3L 7793697 7793743 chr3L 7800774 7800820 297 14 7077 4.0 2.5 3.2 3.3 7123 chr3L 7793697 intron CG32369 - chr3L 7797258 intron CG32369 - chr3L 7800820 intron CG32369 - chr3L_14_7795001 chr3L_7795001 D9 1344 chr3L 7801530 7801549 chr3L 7801636 7801655 9 105 2.0 7.0 4.5 1.6 125 chr3L 7801530 intron CG32369 - chr3L 7801592 intron CG32369 - chr3L 7801655 intron CG32369 - chr3L_9_7800001 chr3L_7800001 D9 1345 chr3L 7814680 7814731 chr3L 7814790 7814841 11 110 6.0 3.0 4.5 2.0 161 chr3L 7814680 3` UTR Pdp1 - chr3L 7814760 3` UTR Pdp1 - chr3L 7814841 3` UTR Pdp1 - chr3L_11_7810001 chr3L_7810001 D9 1346 chr3L 7865539 7865559 chr3L 7865704 7865724 8 165 6.5 0.0 3.2 1.9 185 chr3L 7865539 intron Pdp1 - chr3L 7865632 intron Pdp1 - chr3L 7865724 intron Pdp1 - chr3L_8_7865001 chr3L_7865001 D9 1347 chr3L 7869642 7869653 chr3L 7869747 7869758 9 105 13.0 15.5 14.2 0.6 116 chr3L 7869642 exon CG32365 + chr3L 7869700 exon CG32365 + chr3L 7869758 exon CG32365 + chr3L_9_7865001 chr3L_7865001 D9 1348 chr3L 7886482 7886544 chr3L 7889029 7889085 Stalker4 15 2544 0.0 2.0 1.0 7.5 2603 chr3L 7886482 intron CG32365 + chr3L 7887784 intron CG32365 + chr3L 7889085 intron CG32365 + chr3L_15_7885001 chr3L_7885001 D9 1349 chr3L 7916817 7916852 chr3L 7926013 7926047 roo 6 9196 3.5 4.0 3.8 1.2 9230 chr3L 7916817 3` UTR syd - chr3L 7921432 intron syd - chr3L 7926047 3` UTR syd - chr3L_6_7920001 chr3L_7920001 D9 1350 chr3L 7985345 7985387 chr3L 7987698 7987740 NOF 13 2353 9.0 5.5 7.2 1.6 2395 chr3L 7985345 intron nmo + chr3L 7986542 intron nmo + chr3L 7987740 intron nmo + chr3L_13_7985001 chr3L_7985001 D9 1351 chr3L 8456453 8456478 chr3L 8456571 8456571 18 116 11.5 13.5 12.5 1.3 118 chr3L 8456453 intron Gug + chr3L 8456512 intron Gug + chr3L 8456571 intron Gug + chr3L_18_8455001 chr3L_8455001 D9 1352 chr3L 8481747 8481801 chr3L 8490931 8490984 roo 32 9183 7.5 8.0 7.8 3.6 9237 chr3L 8481747 intron CG43163 - chr3L 8486366 intron CG43163 - chr3L 8490984 intron CG43163 - chr3L_32_8485001 chr3L_8485001 D9 1353 chr3L 8498273 8498326 chr3L 8505765 8505818 blood 14 7492 2.0 3.5 2.8 3.7 7545 chr3L 8498273 intron CG43163 - chr3L 8502046 intron CG43163 - chr3L 8505818 intron CG43163 - chr3L_14_8500001 chr3L_8500001 D9 1354 chr3L 8558637 8558684 chr3L 8558753 8558800 5 116 1.0 2.0 1.5 2.0 163 chr3L 8558637 intron rhea + chr3L 8558718 intron rhea + chr3L 8558800 intron rhea + chr3L_5_8555001 chr3L_8555001 D9 1355 chr3L 8691139 8691189 chr3L 8691246 8691296 19 107 3.0 4.0 3.5 4.2 157 chr3L 8691139 intergenic not near genes chr3L 8691218 intergenic not near genes chr3L 8691296 intergenic not near genes chr3L_19_8690001 chr3L_8690001 D9 1356 chr3L 8751685 8751701 chr3L 8751790 8751806 8 105 4.5 15.0 9.8 0.7 121 chr3L 8751685 intergenic CR44527 - chr3L 8751746 intergenic CR44527 - chr3L 8751806 intergenic CR44527 - chr3L_8_8750001 chr3L_8750001 D9 1357 chr3L 8782100 8782154 chr3L 8782251 8782305 25 151 0.0 4.5 2.2 7.8 205 chr3L 8782100 intron Fhos + chr3L 8782202 intron Fhos + chr3L 8782305 intron Fhos + chr3L_25_8780001 chr3L_8780001 D9 1358 chr3L 8791252 8791308 chr3L 8796697 8796752 I-element 16 5444 8.0 0.0 4.0 3.2 5500 chr3L 8791252 exon Fhos + chr3L 8794002 intron Fhos + chr3L 8796752 intron Fhos + chr3L_16_8790001 chr3L_8790001 D9 1359 chr3L 8837353 8837402 chr3L 8837458 8837507 26 104 12.0 16.5 14.2 1.7 154 chr3L 8837353 intron,exon dally +,CG32026 + chr3L 8837430 intron,exon dally +,CG32026 + chr3L 8837507 intron,exon dally +,CG32026 + chr3L_26_8835001 chr3L_8835001 D9 1360 chr3L 8849191 8849244 chr3L 8849296 8849354 14 105 4.5 2.0 3.2 3.3 163 chr3L 8849191 intron dally + chr3L 8849272 intron dally + chr3L 8849354 intron dally + chr3L_14_8845001 chr3L_8845001 D9 1361 chr3L 8899081 8899114 chr3L 8899191 8899224 5 109 4.0 2.0 3.0 1.2 143 chr3L 8899081 intron TrpA1 - chr3L 8899152 intron TrpA1 - chr3L 8899224 intron TrpA1 - chr3L_5_8895001 chr3L_8895001 D9 1362 chr3L 8928244 8928296 chr3L 8928345 8928397 12 101 2.0 3.0 2.5 3.4 153 chr3L 8928244 intron Tsp66E + chr3L 8928320 intron Tsp66E + chr3L 8928397 intron Tsp66E + chr3L_12_8925001 chr3L_8925001 D9 1363 chr3L 9003921 9003958 chr3L 9004031 9004065 20 110 12.5 6.0 9.2 2.0 144 chr3L 9003921 intergenic not near genes chr3L 9003993 intergenic not near genes chr3L 9004065 intergenic not near genes chr3L_20_9000001 chr3L_9000001 D9 1364 chr3L 9013689 9013691 chr3L 18417066 18417066 9 9403376 47.5 31.0 39.2 0.2 9403377 chr3L 9013689 intron Doc2 - chr3L 13715378 intron bru-3 - chr3L 18417066 intergenic not near genes chr3L_9_13715001 chr3L_13715001 D9 1365 chr3L 9030406 9030443 chr3L 9030508 9030547 8 104 6.0 2.0 4.0 1.6 141 chr3L 9030406 intergenic not near genes chr3L 9030476 intergenic not near genes chr3L 9030547 intergenic not near genes chr3L_8_9030001 chr3L_9030001 D9 1366 chr3L 9076902 9076946 chr3L 9084487 9084531 412 13 7584 12.0 5.0 8.5 1.4 7629 chr3L 9076902 exon Tequila + chr3L 9080716 intron Tequila + chr3L 9084531 exon Tequila + chr3L_13_9080001 chr3L_9080001 D9 1367 chr3L 9118332 9118347 chr3L 9118437 9118452 10 104 18.5 12.0 15.2 0.6 120 chr3L 9118332 intron bol - chr3L 9118392 intron bol - chr3L 9118452 intron bol - chr3L_10_9115001 chr3L_9115001 D9 1368 chr3L 9128175 9128218 chr3L 9128285 9128326 11 109 5.0 2.5 3.8 2.3 151 chr3L 9128175 intron bol - chr3L 9128250 intron bol - chr3L 9128326 intron bol - chr3L_11_9125001 chr3L_9125001 D9 1369 chr3L 9130535 9130581 chr3L 9134321 9134367 412 28 3785 8.0 5.5 6.8 3.6 3832 chr3L 9130535 intergenic bol - chr3L 9132451 intergenic not near genes chr3L 9134367 intergenic Dhpr + chr3L_28_9130001 chr3L_9130001 D9 1370 chr3L 9164673 9164707 chr3L 9166165 9166197 hobo 12 1491 6.0 0.0 3.0 3.0 1524 chr3L 9164673 intron Rdl - chr3L 9165435 intron Rdl - chr3L 9166197 intron Rdl - chr3L_12_9165001 chr3L_9165001 D9 1371 chr3L 9219221 9219262 chr3L 9219918 9219959 jockey 21 696 12.0 14.5 13.2 1.5 738 chr3L 9219221 intergenic not near genes chr3L 9219590 intergenic not near genes chr3L 9219959 intergenic not near genes chr3L_21_9215001 chr3L_9215001 D9 1372 chr3L 9254495 9254546 chr3L 9254813 9254863 16 318 2.5 4.5 3.5 3.6 368 chr3L 9254495 intron GluRIB + chr3L 9254679 intron GluRIB + chr3L 9254863 intron GluRIB + chr3L_16_9250001 chr3L_9250001 D9 1373 chr3L 9270593 9270650 chr3L 9278373 9278402 roo 15 7776 5.5 8.5 7.0 1.9 7809 chr3L 9270593 intron GluRIB + chr3L 9274498 intron GluRIB + chr3L 9278402 exon GluRIB + chr3L_15_9270001 chr3L_9270001 D9 1374 chr3L 9279880 9279928 chr3L 9279980 9280038 18 108 2.0 2.5 2.2 5.6 158 chr3L 9279880 intron GluRIB + chr3L 9279959 intron GluRIB + chr3L 9280038 intron GluRIB + chr3L_18_9275001 chr3L_9275001 D9 1375 chr3L 9312703 9312728 chr3L 9312806 9312831 8 103 8.0 0.0 4.0 1.6 128 chr3L 9312703 intergenic not near genes chr3L 9312767 intergenic not near genes chr3L 9312831 intergenic not near genes chr3L_8_9310001 chr3L_9310001 D9 1376 chr3L 9313026 9313026 chr3L 11777678 11777678 6 2464652 33.5 32.5 33.0 0.2 2464652 chr3L 9313026 intergenic not near genes chr3L 10545352 intron A2bp1 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_6_10545001 chr3L_10545001 D9 1377 chr3L 9328372 9328412 chr3L 9328506 9328548 22 136 6.5 6.5 6.5 2.9 176 chr3L 9328372 intergenic not near genes chr3L 9328460 intergenic not near genes chr3L 9328548 intergenic not near genes chr3L_22_9325001 chr3L_9325001 D9 1378 chr3L 9348446 9348703 chr3L 9348972 9349088 16 518 0.0 0.0 0.0 16.0 642 chr3L 9348446 intergenic PGRP-LC + chr3L 9348767 intergenic PGRP-LC + chr3L 9349088 intergenic not near genes chr3L_16_9345001 chr3L_9345001 D9 1379 chr3L 9359575 9359619 chr3L 9359689 9359735 10 116 3.0 2.5 2.8 2.6 160 chr3L 9359575 3` UTR CG32039 + chr3L 9359655 3` UTR CG32039 + chr3L 9359735 3` UTR CG32039 + chr3L_10_9355001 chr3L_9355001 D9 1380 chr3L 9403010 9403065 chr3L 9403145 9403200 13 135 2.5 1.5 2.0 4.3 190 chr3L 9403010 intergenic not near genes chr3L 9403105 intergenic not near genes chr3L 9403200 intergenic not near genes chr3L_13_9400001 chr3L_9400001 D9 1381 chr3L 9443491 9443509 chr3L 9445307 9445325 S-element 7 1816 4.5 0.0 2.2 2.2 1834 chr3L 9443491 intron CG33926 + chr3L 9444408 intron CG33926 + chr3L 9445325 intron CG33926 + chr3L_7_9440001 chr3L_9440001 D9 1382 chr3L 9492377 9492407 chr3L 9492483 9492513 16 106 16.5 0.0 8.2 1.7 136 chr3L 9492377 intergenic CG32037 - chr3L 9492445 intergenic CG32037 - chr3L 9492513 intergenic CG32037 - chr3L_16_9490001 chr3L_9490001 D9 1383 chr3L 9498182 9498209 chr3L 9498284 9498311 7 102 4.5 1.0 2.8 1.8 129 chr3L 9498182 intron path - chr3L 9498246 intron path - chr3L 9498311 intron path - chr3L_7_9495001 chr3L_9495001 D9 1384 chr3L 9501687 9501725 chr3L 9502198 9502236 roo 7 511 6.0 4.0 5.0 1.2 549 chr3L 9501687 intron path - chr3L 9501962 intron path - chr3L 9502236 intron path - chr3L_7_9500001 chr3L_9500001 D9 1385 chr3L 9503442 9503454 chr3L 9503556 9503568 6 114 8.5 8.0 8.2 0.7 126 chr3L 9503442 intron path - chr3L 9503505 intron path - chr3L 9503568 intron path - chr3L_6_9500001 chr3L_9500001 D9 1386 chr3L 9533739 9533786 chr3L 9541323 9541371 412 26 7584 12.0 17.5 14.8 1.6 7632 chr3L 9533739 intergenic not near genes chr3L 9537555 intergenic not near genes chr3L 9541371 intergenic not near genes chr3L_26_9535001 chr3L_9535001 D9 1387 chr3L 9555945 9555957 chr3L 9556049 9556061 5 104 6.5 10.0 8.2 0.5 116 chr3L 9555945 intron CG42673 + chr3L 9556003 intron CG42673 + chr3L 9556061 intron CG42673 + chr3L_5_9555001 chr3L_9555001 D9 1388 chr3L 9571895 9571919 chr3L 9572266 9572292 jockey 6 373 5.5 2.0 3.8 1.2 397 chr3L 9571895 intron CG42673 + chr3L 9572094 intron CG42673 + chr3L 9572292 intron CG42673 + chr3L_6_9570001 chr3L_9570001 D9 1389 chr3L 9572274 9572323 chr3L 9572376 9572427 4 104 2.0 3.5 2.8 1.1 153 chr3L 9572274 intron CG42673 + chr3L 9572350 intron CG42673 + chr3L 9572427 intron CG42673 + chr3L_4_9570001 chr3L_9570001 D9 1390 chr3L 9575885 9575941 chr3L 9580990 9581046 jockey 24 5105 4.5 5.0 4.8 4.1 5161 chr3L 9575885 intron CG42673 + chr3L 9578466 intron CG42673 + chr3L 9581046 intron CG42673 + chr3L_24_9575001 chr3L_9575001 D9 1391 chr3L 9639004 9639059 chr3L 9639114 9639169 9 110 0.0 2.5 1.2 4.1 165 chr3L 9639004 intron,3` UTR fry -,CG8329 + chr3L 9639086 intron fry - chr3L 9639169 intron fry - chr3L_9_9635001 chr3L_9635001 D9 1392 chr3L 9646451 9646493 chr3L 9646599 9646643 7 149 3.0 0.0 1.5 2.8 192 chr3L 9646451 intron,intron fry -,CG33696 + chr3L 9646547 intron,intron fry -,CG33696 + chr3L 9646643 intron,intron fry -,CG33696 + chr3L_7_9645001 chr3L_9645001 D9 1393 chr3L 9646782 9646830 chr3L 9646905 9646953 9 123 3.5 2.0 2.8 2.4 171 chr3L 9646782 intron,intron fry -,CG33696 + chr3L 9646868 intron,intron fry -,CG33696 + chr3L 9646953 intron,intron fry -,CG33696 + chr3L_9_9645001 chr3L_9645001 D9 1394 chr3L 9665819 9665858 chr3L 9666060 9666099 9 241 8.0 4.5 6.2 1.2 280 chr3L 9665819 intron fry - chr3L 9665959 intron fry - chr3L 9666099 intron fry - chr3L_9_9665001 chr3L_9665001 D9 1395 chr3L 9740684 9740718 chr3L 9741142 9741176 10 458 7.5 3.5 5.5 1.5 492 chr3L 9740684 intron CG42268 - chr3L 9740930 intron CG42268 - chr3L 9741176 intron CG42268 - chr3L_10_9740001 chr3L_9740001 D9 1396 chr3L 9750630 9750645 chr3L 9750731 9750746 8 101 2.5 1.0 1.8 2.9 116 chr3L 9750630 intron CG42268 - chr3L 9750688 intron CG42268 - chr3L 9750746 intron CG42268 - chr3L_8_9750001 chr3L_9750001 D9 1397 chr3L 9775341 9775395 chr3L 9775725 9775780 13 384 0.0 6.5 3.2 3.1 439 chr3L 9775341 intron CG8177 + chr3L 9775560 intron CG8177 + chr3L 9775780 intron CG8177 + chr3L_13_9775001 chr3L_9775001 D9 1398 chr3L 9848489 9848537 chr3L 9848590 9848635 9 100 5.0 1.5 3.2 2.1 146 chr3L 9848489 intron RasGAP1 - chr3L 9848562 intron RasGAP1 - chr3L 9848635 intron RasGAP1 - chr3L_9_9845001 chr3L_9845001 D9 1399 chr3L 9929647 9929697 chr3L 9938454 9938503 roo 6 8806 1.5 2.0 1.8 2.1 8856 chr3L 9929647 intron CG34356 + chr3L 9934075 intron CG34356 + chr3L 9938503 intron CG34356 + chr3L_6_9930001 chr3L_9930001 D9 1400 chr3L 10003130 10003170 chr3L 10003251 10003290 12 122 2.5 6.0 4.2 2.3 160 chr3L 10003130 intron dpr6 + chr3L 10003210 intron dpr6 + chr3L 10003290 intron dpr6 + chr3L_12_10000001 chr3L_10000001 D9 1401 chr3L 10007164 10007198 chr3L 10007292 10007326 9 128 5.5 4.0 4.8 1.6 162 chr3L 10007164 intron dpr6 + chr3L 10007245 intron dpr6 + chr3L 10007326 intron dpr6 + chr3L_9_10005001 chr3L_10005001 D9 1402 chr3L 10092905 10092950 chr3L 10093078 10093125 5 174 20.5 22.0 21.2 0.2 220 chr3L 10092905 intron,exon dpr6 +,CG32054 - chr3L 10093015 intron,exon dpr6 +,CG32054 - chr3L 10093125 intron,exon dpr6 +,CG32054 - chr3L_5_10090001 chr3L_10090001 D9 1403 chr3L 10099064 10099113 chr3L 10099174 10099223 12 110 4.5 3.0 3.8 2.5 159 chr3L 10099064 intron dpr6 + chr3L 10099144 intron dpr6 + chr3L 10099223 intron dpr6 + chr3L_12_10095001 chr3L_10095001 D9 1404 chr3L 10102033 10102067 chr3L 10102154 10102188 18 121 0.5 7.5 4.0 3.6 155 chr3L 10102033 intron dpr6 + chr3L 10102110 intron dpr6 + chr3L 10102188 intron dpr6 + chr3L_18_10100001 chr3L_10100001 D9 1405 chr3L 10161425 10161461 chr3L 10161529 10161565 15 103 0.0 12.5 6.2 2.1 140 chr3L 10161425 intron dpr10 - chr3L 10161495 intron dpr10 - chr3L 10161565 intron dpr10 - chr3L_15_10160001 chr3L_10160001 D9 1406 chr3L 10214714 10214822 chr3L 10214826 10214949 11 132 0.0 0.0 0.0 11.0 235 chr3L 10214714 intergenic not near genes chr3L 10214832 intergenic not near genes chr3L 10214949 intergenic not near genes chr3L_11_10210001 chr3L_10210001 D9 1407 chr3L 10222717 10222777 chr3L 10222821 10222869 15 104 1.0 6.0 3.5 3.3 152 chr3L 10222717 intron scramb1 - chr3L 10222793 intron scramb1 - chr3L 10222869 intron scramb1 - chr3L_15_10220001 chr3L_10220001 D9 1408 chr3L 10245633 10245674 chr3L 10245805 10245843 12 172 6.0 6.5 6.2 1.7 210 chr3L 10245633 intergenic not near genes chr3L 10245738 intergenic not near genes chr3L 10245843 intergenic not near genes chr3L_12_10245001 chr3L_10245001 D9 1409 chr3L 10298653 10298696 chr3L 10298765 10298808 11 112 0.0 1.0 0.5 7.3 155 chr3L 10298653 intergenic not near genes chr3L 10298730 intergenic not near genes chr3L 10298808 intergenic not near genes chr3L_11_10295001 chr3L_10295001 D9 1410 chr3L 10308718 10308765 chr3L 10308820 10308867 18 102 6.0 6.5 6.2 2.5 149 chr3L 10308718 intergenic not near genes chr3L 10308792 intergenic not near genes chr3L 10308867 intergenic not near genes chr3L_18_10305001 chr3L_10305001 D9 1411 chr3L 10314115 10314152 chr3L 10314223 10314263 8 110 1.5 4.5 3.0 2.0 148 chr3L 10314115 intergenic not near genes chr3L 10314189 intergenic not near genes chr3L 10314263 intergenic not near genes chr3L_8_10310001 chr3L_10310001 D9 1412 chr3L 10314463 10314505 chr3L 10314568 10314610 9 104 2.0 5.0 3.5 2.0 147 chr3L 10314463 intergenic not near genes chr3L 10314536 intergenic not near genes chr3L 10314610 intergenic not near genes chr3L_9_10310001 chr3L_10310001 D9 1413 chr3L 10328091 10328120 chr3L 10328228 10328257 4 137 4.0 2.5 3.2 1.0 166 chr3L 10328091 intergenic not near genes chr3L 10328174 intergenic not near genes chr3L 10328257 intergenic not near genes chr3L_4_10325001 chr3L_10325001 D9 1414 chr3L 10395512 10395564 chr3L 10395688 10395742 32 177 8.5 7.0 7.8 3.6 230 chr3L 10395512 intergenic not near genes chr3L 10395627 intergenic not near genes chr3L 10395742 intergenic not near genes chr3L_32_10395001 chr3L_10395001 D9 1415 chr3L 10400132 10400142 chr3L 10400897 10400907 4 764 26.5 12.5 19.5 0.2 775 chr3L 10400132 intergenic not near genes chr3L 10400520 intergenic not near genes chr3L 10400907 intergenic not near genes chr3L_4_10400001 chr3L_10400001 D9 1416 chr3L 10414924 10414965 chr3L 10417321 10417362 Doc 10 2397 5.0 4.0 4.5 1.8 2438 chr3L 10414924 intergenic CG12362 + chr3L 10416143 intergenic not near genes chr3L 10417362 intergenic not near genes chr3L_10_10415001 chr3L_10415001 D9 1417 chr3L 10417553 10417593 chr3L 10417655 10417688 15 101 9.0 11.0 10.0 1.4 135 chr3L 10417553 intergenic not near genes chr3L 10417620 intergenic not near genes chr3L 10417688 intergenic not near genes chr3L_15_10415001 chr3L_10415001 D9 1418 chr3L 10473786 10473843 chr3L 10473885 10473954 14 109 5.5 0.5 3.0 3.5 168 chr3L 10473786 intergenic not near genes chr3L 10473870 intergenic not near genes chr3L 10473954 intergenic not near genes chr3L_14_10470001 chr3L_10470001 D9 1419 chr3L 10526635 10526651 chr3L 10526739 10526757 12 106 14.5 19.0 16.8 0.7 122 chr3L 10526635 intron A2bp1 + chr3L 10526696 intron A2bp1 + chr3L 10526757 intron A2bp1 + chr3L_12_10525001 chr3L_10525001 D9 1420 chr3L 10563250 10563288 chr3L 10563355 10563393 13 105 5.5 0.0 2.8 3.4 143 chr3L 10563250 intron A2bp1 + chr3L 10563322 intron A2bp1 + chr3L 10563393 intron A2bp1 + chr3L_13_10560001 chr3L_10560001 D9 1421 chr3L 10600435 10600474 chr3L 10600537 10600581 10 106 3.0 3.0 3.0 2.5 146 chr3L 10600435 intergenic not near genes chr3L 10600508 intergenic not near genes chr3L 10600581 intergenic not near genes chr3L_10_10600001 chr3L_10600001 D9 1422 chr3L 10614745 10614797 chr3L 10614857 10614901 6 109 0.0 2.5 1.2 2.7 156 chr3L 10614745 intergenic not near genes chr3L 10614823 intergenic not near genes chr3L 10614901 intergenic not near genes chr3L_6_10610001 chr3L_10610001 D9 1423 chr3L 10621841 10621879 chr3L 10621953 10621991 13 112 1.0 11.0 6.0 1.9 150 chr3L 10621841 intergenic not near genes chr3L 10621916 intergenic not near genes chr3L 10621991 intergenic not near genes chr3L_13_10620001 chr3L_10620001 D9 1424 chr3L 10627421 10627438 chr3L 10627529 10627546 5 108 0.0 2.5 1.2 2.3 125 chr3L 10627421 3` UTR CG34238 + chr3L 10627484 intergenic CG34238 +,CG14151 - chr3L 10627546 intergenic CG34238 +,CG14151 - chr3L_5_10625001 chr3L_10625001 D9 1425 chr3L 10730091 10730135 chr3L 10730209 10730254 4 118 1.5 1.5 1.5 1.6 163 chr3L 10730091 intergenic not near genes chr3L 10730172 intergenic not near genes chr3L 10730254 intergenic not near genes chr3L_4_10730001 chr3L_10730001 D9 1426 chr3L 10735808 10735833 chr3L 10735922 10735947 4 114 3.5 5.0 4.2 0.8 139 chr3L 10735808 intergenic not near genes chr3L 10735878 intergenic not near genes chr3L 10735947 intergenic not near genes chr3L_4_10735001 chr3L_10735001 D9 1427 chr3L 10762805 10762864 chr3L 10762914 10762968 22 108 4.0 8.0 6.0 3.1 163 chr3L 10762805 intergenic not near genes chr3L 10762886 intergenic not near genes chr3L 10762968 intergenic not near genes chr3L_22_10760001 chr3L_10760001 D9 1428 chr3L 10820437 10820461 chr3L 10820650 10820671 5 212 0.0 0.0 0.0 5.0 234 chr3L 10820437 intergenic not near genes chr3L 10820554 intergenic not near genes chr3L 10820671 intergenic not near genes chr3L_5_10820001 chr3L_10820001 D9 1429 chr3L 10942034 10942073 chr3L 10942142 10942181 28 107 12.0 11.5 11.8 2.2 147 chr3L 10942034 intergenic not near genes chr3L 10942108 intergenic not near genes chr3L 10942181 intergenic not near genes chr3L_28_10940001 chr3L_10940001 D9 1430 chr3L 10956424 10956469 chr3L 10956567 10956612 14 143 2.0 6.5 4.2 2.7 188 chr3L 10956424 intergenic not near genes chr3L 10956518 intergenic not near genes chr3L 10956612 intergenic not near genes chr3L_14_10955001 chr3L_10955001 D9 1431 chr3L 10958217 10958240 chr3L 10958324 10958347 4 107 3.0 0.0 1.5 1.6 130 chr3L 10958217 intergenic not near genes chr3L 10958282 intergenic not near genes chr3L 10958347 intergenic not near genes chr3L_4_10955001 chr3L_10955001 D9 1432 chr3L 11000061 11000091 chr3L 11000156 11000197 7 97 9.5 15.5 12.5 0.5 136 chr3L 11000061 intron klu - chr3L 11000129 intron klu - chr3L 11000197 intron klu - chr3L_7_11000001 chr3L_11000001 D9 1433 chr3L 11264443 11264493 chr3L 11271420 11271463 17.6 13 6976 4.0 8.5 6.2 1.8 7020 chr3L 11264443 intergenic not near genes chr3L 11267953 intergenic not near genes chr3L 11271463 intergenic not near genes chr3L_13_11265001 chr3L_11265001 D9 1434 chr3L 11339938 11339963 chr3L 11340045 11340070 5 107 5.0 2.0 3.5 1.1 132 chr3L 11339938 intergenic not near genes chr3L 11340004 intergenic not near genes chr3L 11340070 intergenic not near genes chr3L_5_11340001 chr3L_11340001 D9 1435 chr3L 11381553 11381584 chr3L 11381772 11381803 15 219 5.5 5.0 5.2 2.4 250 chr3L 11381553 intergenic not near genes chr3L 11381678 intergenic not near genes chr3L 11381803 intergenic not near genes chr3L_15_11380001 chr3L_11380001 D9 1436 chr3L 11383938 11383980 chr3L 11384042 11384082 20 104 5.5 5.0 5.2 3.2 144 chr3L 11383938 intron CR42755 - chr3L 11384010 3` UTR CR42755 - chr3L 11384082 3` UTR CR42755 - chr3L_20_11380001 chr3L_11380001 D9 1437 chr3L 11386070 11386084 chr3L 11386172 11386186 8 102 10.5 7.5 9.0 0.8 116 chr3L 11386070 intergenic not near genes chr3L 11386128 intergenic not near genes chr3L 11386186 intergenic not near genes chr3L_8_11385001 chr3L_11385001 D9 1438 chr3L 11390320 11390336 chr3L 11390461 11390477 4 140 2.0 7.5 4.8 0.7 157 chr3L 11390320 intergenic not near genes chr3L 11390398 intergenic not near genes chr3L 11390477 intergenic not near genes chr3L_4_11390001 chr3L_11390001 D9 1439 chr3L 11432904 11432940 chr3L 11433008 11433044 12 103 0.0 0.0 0.0 12.0 140 chr3L 11432904 intergenic not near genes chr3L 11432974 intergenic not near genes chr3L 11433044 intergenic not near genes chr3L_12_11430001 chr3L_11430001 D9 1440 chr3L 11435535 11435587 chr3L 11435729 11435781 29 194 8.5 4.5 6.5 3.9 246 chr3L 11435535 intergenic CG6149 -,CR44548 + chr3L 11435658 5` UTR CR44548 + chr3L 11435781 5` UTR CR44548 + chr3L_29_11435001 chr3L_11435001 D9 1441 chr3L 11493138 11493186 chr3L 11493245 11493293 10 107 1.5 3.5 2.5 2.9 155 chr3L 11493138 intron chrb + chr3L 11493216 intron chrb + chr3L 11493293 intron chrb + chr3L_10_11490001 chr3L_11490001 D9 1442 chr3L 11564788 11564794 chr3L 11572438 11572444 412 4 7650 12.5 24.5 18.5 0.2 7656 chr3L 11564788 exon CG33267 + chr3L 11568616 intron CG33267 + chr3L 11572444 exon CG33267 + chr3L_4_11565001 chr3L_11565001 D9 1443 chr3L 11579532 11579583 chr3L 11579663 11579714 13 131 2.5 1.5 2.0 4.3 182 chr3L 11579532 intergenic CG43390 - chr3L 11579623 intergenic CG43390 - chr3L 11579714 intergenic CG43390 - chr3L_13_11575001 chr3L_11575001 D9 1444 chr3L 11580638 11580658 chr3L 11580748 11580769 8 112 0.0 3.5 1.8 2.9 131 chr3L 11580638 intergenic CG43391 - chr3L 11580704 intergenic CG43391 - chr3L 11580769 intergenic CG43391 - chr3L_8_11580001 chr3L_11580001 D9 1445 chr3L 11663125 11663147 chr3L 11663327 11663349 8 202 5.5 0.0 2.8 2.1 224 chr3L 11663125 intron CG32085 - chr3L 11663237 intron CG32085 - chr3L 11663349 intron CG32085 - chr3L_8_11660001 chr3L_11660001 D9 1446 chr3L 11678077 11678124 chr3L 11678189 11678236 12 112 2.5 8.0 5.2 1.9 159 chr3L 11678077 intron CG32085 - chr3L 11678156 intron CG32085 - chr3L 11678236 intron CG32085 - chr3L_12_11675001 chr3L_11675001 D9 1447 chr3L 11723063 11723083 chr3L 11727881 11727890 Doc 4 4816 4.0 1.5 2.8 1.1 4827 chr3L 11723063 3` UTR Bmcp + chr3L 11725476 intron Bmcp + chr3L 11727890 3` UTR Bmcp + chr3L_4_11725001 chr3L_11725001 D9 1448 chr3L 11743992 11744041 chr3L 11744125 11744174 10 133 4.5 3.5 4.0 2.0 182 chr3L 11743992 exon CG6024 - chr3L 11744083 intron CG6024 - chr3L 11744174 intron CG6024 - chr3L_10_11740001 chr3L_11740001 D9 1449 chr3L 11757897 11757921 chr3L 11758015 11758043 12 121 12.5 0.0 6.2 1.7 146 chr3L 11757897 intron CG6024 - chr3L 11757970 intron CG6024 - chr3L 11758043 intron CG6024 - chr3L_12_11755001 chr3L_11755001 D9 1450 chr3L 7749470 7749471 chr3L 11777678 11777678 17 4028207 10.5 32.5 21.5 0.8 4028208 chr3L 7749470 intron,3` UTR CG32373 +,CG13685 + chr3L 9763574 5` UTR CG8177 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_17_9760001 chr3L_9760001 D9 1451 chr3L 9313026 9313026 chr3L 11777678 11777678 12 2464652 33.5 32.5 33.0 0.4 2464652 chr3L 9313026 intergenic not near genes chr3L 10545352 intron A2bp1 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_12_10545001 chr3L_10545001 D9 1452 chr3L 11777678 11777678 chr3L 12163305 12163305 8 385627 32.0 25.5 28.8 0.3 385627 chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L 11970492 exon Muc68E - chr3L 12163305 intron CG9760 - chr3L_8_11970001 chr3L_11970001 D9 1453 chr3L 11826529 11826585 chr3L 11826662 11826718 16 132 6.5 6.0 6.2 2.2 189 chr3L 11826529 intergenic CycA - chr3L 11826624 intergenic CycA - chr3L 11826718 3` UTR CycA - chr3L_16_11825001 chr3L_11825001 D9 1454 chr3L 11887238 11887286 chr3L 11887360 11887417 5 123 5.0 0.0 2.5 1.4 179 chr3L 11887238 intron CG44837 - chr3L 11887328 intron,3` UTR CG44837 -,CG5897 - chr3L 11887417 intron,3` UTR CG44837 -,CG5897 - chr3L_5_11885001 chr3L_11885001 D9 1455 chr3L 11943475 11943521 chr3L 11943601 11943646 12 126 4.0 10.5 7.2 1.5 171 chr3L 11943475 3` UTR Rpt4R + chr3L 11943560 intergenic Rpt4R +,CG5883 - chr3L 11943646 3` UTR CG5883 - chr3L_12_11940001 chr3L_11940001 D9 1456 chr3L 11961176 11961216 chr3L 11961305 11961345 27 128 16.5 17.0 16.8 1.5 169 chr3L 11961176 exon prc - chr3L 11961260 exon prc - chr3L 11961345 exon prc - chr3L_27_11960001 chr3L_11960001 D9 1457 chr3L 11961954 11961963 chr3L 11964335 11964357 9 2390 31.0 24.5 27.8 0.3 2403 chr3L 11961954 exon prc - chr3L 11963156 exon prc - chr3L 11964357 intron prc - chr3L_9_11960001 chr3L_11960001 D9 1458 chr3L 11998315 11998340 chr3L 11998422 11998448 8 108 0.0 3.0 1.5 3.2 133 chr3L 11998315 intergenic Pop2 -,Grip163 - chr3L 11998382 intergenic Pop2 -,Grip163 - chr3L 11998448 3` UTR Pop2 - chr3L_8_11995001 chr3L_11995001 D9 1459 chr3L 12013888 12013937 chr3L 12014004 12014053 19 116 4.0 6.0 5.0 3.2 165 chr3L 12013888 intron rols - chr3L 12013970 intron rols - chr3L 12014053 intron rols - chr3L_19_12010001 chr3L_12010001 D9 1460 chr3L 12089056 12089110 chr3L 12089161 12089215 23 104 4.0 5.0 4.5 4.2 159 chr3L 12089056 exon CG17154 + chr3L 12089136 3` UTR CG17154 + chr3L 12089215 3` UTR CG17154 + chr3L_23_12085001 chr3L_12085001 D9 1461 chr3L 11777678 11777678 chr3L 12163305 12163305 4 385627 32.0 25.5 28.8 0.1 385627 chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L 11970492 exon Muc68E - chr3L 12163305 intron CG9760 - chr3L_4_11970001 chr3L_11970001 D9 1462 chr3L 12171275 12171315 chr3L 12171398 12171438 10 123 2.0 2.0 2.0 3.3 163 chr3L 12171275 intron Rh7 - chr3L 12171356 intron Rh7 - chr3L 12171438 intron Rh7 - chr3L_10_12170001 chr3L_12170001 D9 1463 chr3L 12186343 12186398 chr3L 12186462 12186539 4 136 3.0 0.0 1.5 1.6 196 chr3L 12186343 intron CG6910 + chr3L 12186441 intron CG6910 + chr3L 12186539 exon CG6910 + chr3L_4_12185001 chr3L_12185001 D9 1464 chr3L 12204372 12204419 chr3L 12204488 12204535 10 116 2.5 5.0 3.8 2.1 163 chr3L 12204372 3` UTR CG5626 - chr3L 12204454 intron CG5626 - chr3L 12204535 intron CG5626 - chr3L_10_12200001 chr3L_12200001 D9 1465 chr3L 12229303 12229344 chr3L 12229428 12229467 9 125 7.0 9.5 8.2 1.0 164 chr3L 12229303 intron app - chr3L 12229385 intron app - chr3L 12229467 intron app - chr3L_9_12225001 chr3L_12225001 D9 1466 chr3L 12297007 12297044 chr3L 12298595 12298632 10 1588 36.0 42.5 39.2 0.2 1625 chr3L 12297007 intergenic not near genes chr3L 12297820 intergenic not near genes chr3L 12298632 intergenic not near genes chr3L_10_12295001 chr3L_12295001 D9 1467 chr3L 12356443 12356501 chr3L 12356619 12356678 19 175 4.0 7.5 5.8 2.8 235 chr3L 12356443 intergenic not near genes chr3L 12356560 intergenic not near genes chr3L 12356678 intergenic not near genes chr3L_19_12355001 chr3L_12355001 D9 1468 chr3L 12369509 12369563 chr3L 12369624 12369678 9 115 4.0 1.0 2.5 2.6 169 chr3L 12369509 intron Ncc69 - chr3L 12369594 intron Ncc69 - chr3L 12369678 intron Ncc69 - chr3L_9_12365001 chr3L_12365001 D9 1469 chr3L 12383851 12383908 chr3L 12383964 12384021 5 113 2.0 2.0 2.0 1.7 170 chr3L 12383851 intron Ncc69 - chr3L 12383936 intron Ncc69 - chr3L 12384021 intron Ncc69 - chr3L_5_12380001 chr3L_12380001 D9 1470 chr3L 12398717 12398768 chr3L 12398843 12398894 12 126 1.5 5.5 3.5 2.7 177 chr3L 12398717 intron CG32104 - chr3L 12398806 exon CG32104 - chr3L 12398894 exon CG32104 - chr3L_12_12395001 chr3L_12395001 D9 1471 chr3L 12446252 12446294 chr3L 12446348 12446358 18 89 4.5 6.5 5.5 2.8 106 chr3L 12446252 intergenic not near genes chr3L 12446305 intergenic not near genes chr3L 12446358 intergenic not near genes chr3L_18_12445001 chr3L_12445001 D9 1472 chr3L 12491678 12491735 chr3L 12491786 12491843 4 108 0.0 6.5 3.2 1.0 165 chr3L 12491678 intergenic CG10657 -,CR45682 +,CR45681 + chr3L 12491760 intergenic CG10657 -,CR45682 + chr3L 12491843 3` UTR,5` UTR CG10657 -,CR45682 + chr3L_4_12490001 chr3L_12490001 D9 1473 chr3L 12539167 12539208 chr3L 12539274 12539317 10 109 4.0 3.0 3.5 2.2 150 chr3L 12539167 intron sowah - chr3L 12539242 intron sowah - chr3L 12539317 intron sowah - chr3L_10_12535001 chr3L_12535001 D9 1474 chr3L 12578043 12578082 chr3L 12578156 12578195 6 113 1.5 0.0 0.8 3.3 152 chr3L 12578043 intergenic not near genes chr3L 12578119 intergenic not near genes chr3L 12578195 intergenic not near genes chr3L_6_12575001 chr3L_12575001 D9 1475 chr3L 12591610 12591641 chr3L 12591712 12591743 23 102 10.0 13.5 11.8 1.8 133 chr3L 12591610 intron ara + chr3L 12591676 intron ara + chr3L 12591743 intron ara + chr3L_23_12590001 chr3L_12590001 D9 1476 chr3L 12610981 12611022 chr3L 12611252 12611293 6 270 1.5 1.5 1.5 2.4 312 chr3L 12610981 intron caup + chr3L 12611137 intron caup + chr3L 12611293 intron caup + chr3L_6_12610001 chr3L_12610001 D9 1477 chr3L 12620950 12620982 chr3L 12621072 12621105 23 122 12.5 10.0 11.2 1.9 155 chr3L 12620950 3` UTR caup + chr3L 12621028 3` UTR caup + chr3L 12621105 3` UTR caup + chr3L_23_12620001 chr3L_12620001 D9 1478 chr3L 12626147 12626180 chr3L 12626281 12626290 9 131 6.5 0.0 3.2 2.1 143 chr3L 12626147 intergenic not near genes chr3L 12626218 intergenic not near genes chr3L 12626290 intergenic not near genes chr3L_9_12625001 chr3L_12625001 D9 1479 chr3L 12631061 12631105 chr3L 12631169 12631211 16 108 4.5 2.0 3.2 3.8 150 chr3L 12631061 intron CR32111 + chr3L 12631136 intron CR32111 + chr3L 12631211 intron CR32111 + chr3L_16_12630001 chr3L_12630001 D9 1480 chr3L 12631867 12631906 chr3L 12632102 12632139 12 234 8.0 4.5 6.2 1.7 272 chr3L 12631867 intron CR32111 + chr3L 12632003 intron CR32111 + chr3L 12632139 intron CR32111 + chr3L_12_12630001 chr3L_12630001 D9 1481 chr3L 12647926 12647976 chr3L 12648027 12648077 25 101 10.5 4.0 7.2 3.0 151 chr3L 12647926 5` UTR CR32111 + chr3L 12648002 5` UTR CR32111 + chr3L 12648077 5` UTR CR32111 + chr3L_25_12645001 chr3L_12645001 D9 1482 chr3L 12666901 12666941 chr3L 12667038 12667078 7 137 2.0 0.5 1.2 3.2 177 chr3L 12666901 intergenic not near genes chr3L 12666990 intergenic not near genes chr3L 12667078 intergenic not near genes chr3L_7_12665001 chr3L_12665001 D9 1483 chr3L 12799815 12799836 chr3L 12799948 12799967 7 133 7.5 8.5 8.0 0.8 152 chr3L 12799815 intron Atg1 - chr3L 12799891 intron Atg1 - chr3L 12799967 intron Atg1 - chr3L_7_12795001 chr3L_12795001 D9 1484 chr3L 12801953 12802013 chr3L 12802054 12802114 17 101 4.0 4.0 4.0 3.4 161 chr3L 12801953 intron Atg1 - chr3L 12802034 intron Atg1 - chr3L 12802114 intron Atg1 - chr3L_17_12800001 chr3L_12800001 D9 1485 chr3L 12829705 12829765 chr3L 12830536 12830595 10 828 5.5 1.5 3.5 2.2 890 chr3L 12829705 intron CG10960 - chr3L 12830150 intron CG10960 - chr3L 12830595 intron CG10960 - chr3L_10_12830001 chr3L_12830001 D9 1486 chr3L 12857973 12857996 chr3L 12858093 12858116 5 119 4.0 2.0 3.0 1.2 143 chr3L 12857973 3` UTR CG32107 - chr3L 12858044 3` UTR CG32107 - chr3L 12858116 3` UTR CG32107 - chr3L_5_12855001 chr3L_12855001 D9 1487 chr3L 12869528 12869571 chr3L 12869643 12869688 21 117 10.0 7.5 8.8 2.1 160 chr3L 12869528 intergenic not near genes chr3L 12869608 intergenic not near genes chr3L 12869688 intergenic not near genes chr3L_21_12865001 chr3L_12865001 D9 1488 chr3L 12874901 12874956 chr3L 12877218 12877273 jockey 11 2317 4.5 2.5 3.5 2.4 2372 chr3L 12874901 intergenic not near genes chr3L 12876087 intergenic not near genes chr3L 12877273 intergenic not near genes chr3L_11_12875001 chr3L_12875001 D9 1489 chr3L 12894781 12894809 chr3L 12894884 12894910 8 102 11.0 16.0 13.5 0.6 129 chr3L 12894781 intergenic CG14118 + chr3L 12894846 intergenic CG14118 + chr3L 12894910 intergenic CG14118 + chr3L_8_12890001 chr3L_12890001 D9 1490 chr3L 12919255 12919280 chr3L 12924753 12924778 Rt1c 9 5498 15.5 11.0 13.2 0.6 5523 chr3L 12919255 intergenic not near genes chr3L 12922016 intergenic not near genes chr3L 12924778 intergenic not near genes chr3L_9_12920001 chr3L_12920001 D9 1491 chr3L 12957115 12957170 chr3L 12957370 12957425 6 254 0.0 5.0 2.5 1.7 310 chr3L 12957115 intergenic not near genes chr3L 12957270 intergenic not near genes chr3L 12957425 intergenic not near genes chr3L_6_12955001 chr3L_12955001 D9 1492 chr3L 12957787 12957811 chr3L 12962294 12962318 copia 7 4507 3.5 11.5 7.5 0.8 4531 chr3L 12957787 intergenic not near genes chr3L 12960052 intergenic not near genes chr3L 12962318 intergenic not near genes chr3L_7_12960001 chr3L_12960001 D9 1493 chr3L 12966111 12966164 chr3L 12966225 12966278 6 114 5.0 1.0 3.0 1.5 167 chr3L 12966111 intron Or69a - chr3L 12966194 intron Or69a - chr3L 12966278 intron Or69a - chr3L_6_12965001 chr3L_12965001 D9 1494 chr3L 12978500 12978791 chr3L 12978607 12978895 8 105 1.0 3.5 2.2 2.5 395 chr3L 12978500 intergenic not near genes chr3L 12978698 intergenic not near genes chr3L 12978895 intergenic not near genes chr3L_8_12975001 chr3L_12975001 D9 1495 chr3L 12980496 12980553 chr3L 12980609 12980671 11 113 4.0 0.0 2.0 3.7 175 chr3L 12980496 intergenic not near genes chr3L 12980584 intergenic not near genes chr3L 12980671 intergenic not near genes chr3L_11_12980001 chr3L_12980001 D9 1496 chr3L 13069534 13069586 chr3L 13069638 13069690 5 104 2.0 6.5 4.2 1.0 156 chr3L 13069534 intergenic not near genes chr3L 13069612 intergenic not near genes chr3L 13069690 intergenic not near genes chr3L_5_13065001 chr3L_13065001 D9 1497 chr3L 13076944 13076990 chr3L 13077180 13077226 12 236 0.5 4.5 2.5 3.4 282 chr3L 13076944 intergenic not near genes chr3L 13077085 intergenic not near genes chr3L 13077226 intergenic not near genes chr3L_12_13075001 chr3L_13075001 D9 1498 chr3L 13123614 13123651 chr3L 13123715 13123752 10 101 4.5 5.5 5.0 1.7 138 chr3L 13123614 intergenic not near genes chr3L 13123683 intergenic not near genes chr3L 13123752 intergenic not near genes chr3L_10_13120001 chr3L_13120001 D9 1499 chr3L 13134492 13134537 chr3L 13134603 13134648 8 111 3.5 0.5 2.0 2.7 156 chr3L 13134492 intergenic not near genes chr3L 13134570 intergenic not near genes chr3L 13134648 intergenic not near genes chr3L_8_13130001 chr3L_13130001 D9 1500 chr3L 13147366 13147397 chr3L 13147467 13147499 7 102 0.0 6.0 3.0 1.8 133 chr3L 13147366 intergenic not near genes chr3L 13147432 intergenic not near genes chr3L 13147499 intergenic not near genes chr3L_7_13145001 chr3L_13145001 D9 1501 chr3L 13159267 13159290 chr3L 13159371 13159393 15 104 5.0 9.5 7.2 1.8 126 chr3L 13159267 intergenic not near genes chr3L 13159330 intergenic not near genes chr3L 13159393 intergenic not near genes chr3L_15_13155001 chr3L_13155001 D9 1502 chr3L 13206210 13206263 chr3L 13206317 13206367 17 107 4.5 6.5 5.5 2.6 157 chr3L 13206210 intergenic not near genes chr3L 13206288 intergenic not near genes chr3L 13206367 intergenic not near genes chr3L_17_13205001 chr3L_13205001 D9 1503 chr3L 13235745 13235776 chr3L 13235841 13235885 11 108 3.0 8.0 5.5 1.7 140 chr3L 13235745 intron caps + chr3L 13235815 intron caps + chr3L 13235885 intron caps + chr3L_11_13235001 chr3L_13235001 D9 1504 chr3L 13296499 13296539 chr3L 13296612 13296655 14 115 4.5 2.0 3.2 3.3 156 chr3L 13296499 intergenic Sfp70A4 - chr3L 13296577 3` UTR Sfp70A4 - chr3L 13296655 3` UTR Sfp70A4 - chr3L_14_13295001 chr3L_13295001 D9 1505 chr3L 13315896 13315950 chr3L 13316185 13316239 5 289 0.0 1.0 0.5 3.3 343 chr3L 13315896 intergenic not near genes chr3L 13316068 intergenic not near genes chr3L 13316239 intergenic not near genes chr3L_5_13315001 chr3L_13315001 D9 1506 chr3L 13320581 13320641 chr3L 13320697 13320751 27 115 4.5 11.0 7.8 3.1 170 chr3L 13320581 intergenic not near genes chr3L 13320666 intergenic not near genes chr3L 13320751 intergenic not near genes chr3L_27_13320001 chr3L_13320001 D9 1507 chr3L 13338257 13338310 chr3L 13338378 13338416 9 119 5.0 5.0 5.0 1.5 159 chr3L 13338257 intergenic not near genes chr3L 13338336 intergenic not near genes chr3L 13338416 intergenic not near genes chr3L_9_13335001 chr3L_13335001 D9 1508 chr3L 13372927 13372972 chr3L 13373040 13373085 10 112 1.0 5.0 3.0 2.5 158 chr3L 13372927 intergenic not near genes chr3L 13373006 intergenic not near genes chr3L 13373085 intergenic not near genes chr3L_10_13370001 chr3L_13370001 D9 1509 chr3L 13400515 13400545 chr3L 13400616 13400646 11 101 2.5 4.0 3.2 2.6 131 chr3L 13400515 intron sens - chr3L 13400580 intron sens - chr3L 13400646 intron sens - chr3L_11_13400001 chr3L_13400001 D9 1510 chr3L 13452640 13452677 chr3L 13452753 13452790 8 112 0.0 4.5 2.2 2.5 150 chr3L 13452640 intron CG10738 + chr3L 13452715 intron CG10738 + chr3L 13452790 intron CG10738 + chr3L_8_13450001 chr3L_13450001 D9 1511 chr3L 13525136 13525188 chr3L 13532957 13533009 roo 17 7821 3.0 5.0 4.0 3.4 7873 chr3L 13525136 intergenic not near genes chr3L 13529072 intergenic not near genes chr3L 13533009 intergenic not near genes chr3L_17_13525001 chr3L_13525001 D9 1512 chr3L 13535888 13535932 chr3L 13535989 13536033 5 101 3.5 6.0 4.8 0.9 145 chr3L 13535888 intergenic not near genes chr3L 13535960 intergenic not near genes chr3L 13536033 intergenic not near genes chr3L_5_13535001 chr3L_13535001 D9 1513 chr3L 13574608 13574620 chr3L 13580135 13580156 Rt1c 9 5535 15.5 13.0 14.2 0.6 5548 chr3L 13574608 intron bru-3 - chr3L 13577382 intron bru-3 - chr3L 13580156 intron bru-3 - chr3L_9_13575001 chr3L_13575001 D9 1514 chr3L 13692147 13692158 chr3L 13692260 13692271 9 113 2.0 9.0 5.5 1.4 124 chr3L 13692147 intron bru-3 - chr3L 13692209 intron bru-3 - chr3L 13692271 intron bru-3 - chr3L_9_13690001 chr3L_13690001 D9 1515 chr3L 13692563 13692615 chr3L 13692664 13692717 15 102 4.5 3.5 4.0 3.0 154 chr3L 13692563 intron bru-3 - chr3L 13692640 intron bru-3 - chr3L 13692717 intron bru-3 - chr3L_15_13690001 chr3L_13690001 D9 1516 chr3L 13804540 13804566 chr3L 13822851 13822876 roo 6 18311 5.0 5.0 5.0 1.0 18336 chr3L 13804540 intergenic not near genes chr3L 13813708 intergenic not near genes chr3L 13822876 intergenic not near genes chr3L_6_13810001 chr3L_13810001 D9 1517 chr3L 13828681 13828720 chr3L 13828780 13828819 12 101 3.0 7.0 5.0 2.0 138 chr3L 13828681 intergenic not near genes chr3L 13828750 intergenic not near genes chr3L 13828819 intergenic not near genes chr3L_12_13825001 chr3L_13825001 D9 1518 chr3L 13833763 13833768 chr3L 13833925 13833930 4 162 9.0 7.0 8.0 0.4 167 chr3L 13833763 intergenic not near genes chr3L 13833846 intergenic not near genes chr3L 13833930 intergenic not near genes chr3L_4_13830001 chr3L_13830001 D9 1519 chr3L 13868072 13868108 chr3L 13868233 13868268 8 161 7.5 2.0 4.8 1.4 196 chr3L 13868072 3` UTR dysc - chr3L 13868170 3` UTR dysc - chr3L 13868268 3` UTR dysc - chr3L_8_13865001 chr3L_13865001 D9 1520 chr3L 13884357 13884386 chr3L 13884473 13884502 12 116 11.5 5.5 8.5 1.3 145 chr3L 13884357 intron dysc - chr3L 13884430 intron dysc - chr3L 13884502 intron dysc - chr3L_12_13880001 chr3L_13880001 D9 1521 chr3L 13920394 13920422 chr3L 13920499 13920527 8 105 2.5 2.5 2.5 2.3 133 chr3L 13920394 intron Rgl - chr3L 13920460 intron Rgl - chr3L 13920527 intron Rgl - chr3L_8_13920001 chr3L_13920001 D9 1522 chr3L 13921353 13921404 chr3L 13921459 13921510 4 105 1.5 4.0 2.8 1.1 157 chr3L 13921353 intron Rgl - chr3L 13921432 intron Rgl - chr3L 13921510 intron Rgl - chr3L_4_13920001 chr3L_13920001 D9 1523 chr3L 14076059 14076103 chr3L 14076160 14076207 6 104 1.0 4.0 2.5 1.7 148 chr3L 14076059 3` UTR,intron Pex1 +,btl + chr3L 14076133 intron btl + chr3L 14076207 intron btl + chr3L_6_14075001 chr3L_14075001 D9 1524 chr3L 14180724 14180763 chr3L 14180823 14180859 7 100 1.5 8.0 4.8 1.2 135 chr3L 14180724 intergenic not near genes chr3L 14180792 intergenic not near genes chr3L 14180859 intergenic not near genes chr3L_7_14180001 chr3L_14180001 D9 1525 chr3L 14236039 14236059 chr3L 14236201 14236221 12 162 7.5 2.5 5.0 2.0 182 chr3L 14236039 intergenic CG34244 - chr3L 14236130 intergenic CG34244 - chr3L 14236221 intergenic CG34244 -,CG7906 + chr3L_12_14235001 chr3L_14235001 D9 1526 chr3L 14239978 14240007 chr3L 14240100 14240127 7 122 2.0 2.0 2.0 2.3 149 chr3L 14239978 intergenic not near genes chr3L 14240052 intergenic not near genes chr3L 14240127 intergenic not near genes chr3L_7_14240001 chr3L_14240001 D9 1527 chr3L 14245556 14245593 chr3L 14245665 14245712 1360 17 118 11.5 10.5 11.0 1.4 156 chr3L 14245556 3` UTR CR44561 - chr3L 14245634 3` UTR CR44561 - chr3L 14245712 intergenic CR44561 -,CR44560 + chr3L_17_14245001 chr3L_14245001 D9 1528 chr3L 14282562 14282607 chr3L 14282667 14282712 28 104 9.5 10.5 10.0 2.5 150 chr3L 14282562 intron fz + chr3L 14282637 intron fz + chr3L 14282712 intron fz + chr3L_28_14280001 chr3L_14280001 D9 1529 chr3L 14295956 14296011 chr3L 14296467 14296522 roo 23 511 10.5 4.5 7.5 2.7 566 chr3L 14295956 intron fz + chr3L 14296239 intron fz + chr3L 14296522 intron fz + chr3L_23_14295001 chr3L_14295001 D9 1530 chr3L 14311998 14312049 chr3L 14316837 14316888 X-element 30 4838 8.5 5.5 7.0 3.8 4890 chr3L 14311998 exon fz + chr3L 14314443 intron fz + chr3L 14316888 intron fz + chr3L_30_14310001 chr3L_14310001 D9 1531 chr3L 14425653 14425692 chr3L 14425762 14425802 8 110 5.0 4.0 4.5 1.5 149 chr3L 14425653 intron bbg - chr3L 14425728 intron bbg - chr3L 14425802 intron bbg - chr3L_8_14425001 chr3L_14425001 D9 1532 chr3L 14467099 14467156 chr3L 14467212 14467269 11 113 3.5 4.0 3.8 2.3 170 chr3L 14467099 intron bbg - chr3L 14467184 intron bbg - chr3L 14467269 intron bbg - chr3L_11_14465001 chr3L_14465001 D9 1533 chr3L 14468430 14468475 chr3L 14473661 14473704 copia 11 5230 6.5 7.0 6.8 1.4 5274 chr3L 14468430 intron bbg - chr3L 14471067 intron bbg - chr3L 14473704 intron bbg - chr3L_11_14470001 chr3L_14470001 D9 1534 chr3L 14522076 14522129 chr3L 14522199 14522253 8 124 1.5 5.5 3.5 1.8 177 chr3L 14522076 intron bbg - chr3L 14522164 intron bbg - chr3L 14522253 intron bbg - chr3L_8_14520001 chr3L_14520001 D9 1535 chr3L 14546807 14546815 chr3L 14546933 14546941 4 126 0.0 12.0 6.0 0.6 134 chr3L 14546807 intron CG9238 - chr3L 14546874 intron CG9238 - chr3L 14546941 intron CG9238 - chr3L_4_14545001 chr3L_14545001 D9 1536 chr3L 14593999 14594058 chr3L 14594114 14594173 11 114 4.0 2.0 3.0 2.8 174 chr3L 14593999 intron HGTX - chr3L 14594086 intron HGTX - chr3L 14594173 intron HGTX - chr3L_11_14590001 chr3L_14590001 D9 1537 chr3L 14618382 14618418 chr3L 14618619 14618657 16 240 4.0 3.0 3.5 3.6 275 chr3L 14618382 intron shd + chr3L 14618520 intron shd + chr3L 14618657 intron shd + chr3L_16_14615001 chr3L_14615001 D9 1538 chr3L 14635681 14635734 chr3L 14635785 14635838 19 104 5.5 1.5 3.5 4.2 157 chr3L 14635681 intron dlp + chr3L 14635760 intron dlp + chr3L 14635838 intron dlp + chr3L_19_14635001 chr3L_14635001 D9 1539 chr3L 14721165 14721208 chr3L 14723033 14723074 Rt1c 27 1867 12.0 13.0 12.5 2.0 1909 chr3L 14721165 intron ome + chr3L 14722120 intron ome + chr3L 14723074 intron ome + chr3L_27_14720001 chr3L_14720001 D9 1540 chr3L 14724810 14724829 chr3L 14724919 14724936 6 109 1.5 7.5 4.5 1.1 126 chr3L 14724810 intron ome + chr3L 14724873 intron ome + chr3L 14724936 intron ome + chr3L_6_14720001 chr3L_14720001 D9 1541 chr3L 14729657 14729675 chr3L 14729758 14729776 9 101 6.5 4.0 5.2 1.5 119 chr3L 14729657 intron ome + chr3L 14729716 intron ome + chr3L 14729776 intron ome + chr3L_9_14725001 chr3L_14725001 D9 1542 chr3L 14740867 14740922 chr3L 14740981 14741036 9 114 3.0 1.5 2.2 2.8 169 chr3L 14740867 intron ome + chr3L 14740952 intron ome + chr3L 14741036 intron ome + chr3L_9_14740001 chr3L_14740001 D9 1543 chr3L 14836655 14836691 chr3L 14836756 14836792 12 101 4.0 0.0 2.0 4.0 137 chr3L 14836655 intron CG17839 + chr3L 14836724 intron CG17839 + chr3L 14836792 intron CG17839 + chr3L_12_14835001 chr3L_14835001 D9 1544 chr3L 14866802 14866834 chr3L 14866918 14866950 18 116 6.0 5.5 5.8 2.6 148 chr3L 14866802 exon CG17839 + chr3L 14866876 intron CG17839 + chr3L 14866950 intron CG17839 + chr3L_18_14865001 chr3L_14865001 D9 1545 chr3L 14913878 14914156 chr3L 14913980 14914274 25 103 3.5 4.5 4.0 5.0 396 chr3L 14913878 intron DCX-EMAP + chr3L 14914076 intron DCX-EMAP + chr3L 14914274 intron DCX-EMAP + chr3L_25_14910001 chr3L_14910001 D9 1546 chr3L 14917636 14917691 chr3L 14917744 14917799 25 108 5.0 4.0 4.5 4.5 163 chr3L 14917636 intron DCX-EMAP + chr3L 14917718 intron DCX-EMAP + chr3L 14917799 intron DCX-EMAP + chr3L_25_14915001 chr3L_14915001 D9 1547 chr3L 14922084 14922132 chr3L 14922217 14922265 13 132 8.5 1.5 5.0 2.2 181 chr3L 14922084 intron DCX-EMAP + chr3L 14922174 intron DCX-EMAP + chr3L 14922265 intron DCX-EMAP + chr3L_13_14920001 chr3L_14920001 D9 1548 chr3L 14954357 14954398 chr3L 14956051 14956089 transib2 10 1693 2.0 3.0 2.5 2.9 1732 chr3L 14954357 intergenic not near genes chr3L 14955223 intergenic not near genes chr3L 14956089 intergenic not near genes chr3L_10_14955001 chr3L_14955001 D9 1549 chr3L 15069798 15069803 chr3L 15069957 15069979 9 172 31.0 127.0 79.0 0.1 181 chr3L 15069798 exon cp309 - chr3L 15069888 intron cp309 - chr3L 15069979 exon cp309 - chr3L_9_15065001 chr3L_15065001 D9 1550 chr3L 15069805 15069814 chr3L 15069937 15069990 19 168 31.0 91.5 61.2 0.3 185 chr3L 15069805 exon cp309 - chr3L 15069898 intron cp309 - chr3L 15069990 exon cp309 - chr3L_19_15065001 chr3L_15065001 D9 1551 chr3L 15085024 15085081 chr3L 15086215 15086271 1360 16 1188 1.0 2.5 1.8 5.7 1247 chr3L 15085024 intron cp309 - chr3L 15085648 intron cp309 - chr3L 15086271 intron cp309 - chr3L_16_15085001 chr3L_15085001 D9 1552 chr3L 15233543 15233556 chr3L 15233649 15233662 5 106 5.0 1.0 3.0 1.2 119 chr3L 15233543 intergenic not near genes chr3L 15233602 intergenic not near genes chr3L 15233662 intergenic not near genes chr3L_5_15230001 chr3L_15230001 D9 1553 chr3L 15257409 15257441 chr3L 15257647 15257679 9 238 6.5 1.5 4.0 1.8 270 chr3L 15257409 intergenic not near genes chr3L 15257544 intergenic not near genes chr3L 15257679 intergenic not near genes chr3L_9_15255001 chr3L_15255001 D9 1554 chr3L 15295758 15295793 chr3L 15298625 15298661 gypsy5 8 2867 15.5 17.5 16.5 0.5 2903 chr3L 15295758 intergenic not near genes chr3L 15297210 intergenic not near genes chr3L 15298661 intergenic Best4 + chr3L_8_15295001 chr3L_15295001 D9 1555 chr3L 15333121 15333166 chr3L 15333225 15333273 5 105 0.5 5.0 2.8 1.3 152 chr3L 15333121 intergenic CR43247 + chr3L 15333197 intergenic CR43247 + chr3L 15333273 intergenic CR43247 + chr3L_5_15330001 chr3L_15330001 D9 1556 chr3L 15423745 15423773 chr3L 15426614 15426642 opus 12 2869 9.0 2.5 5.8 1.8 2897 chr3L 15423745 intergenic not near genes chr3L 15425194 intergenic not near genes chr3L 15426642 intergenic not near genes chr3L_12_15425001 chr3L_15425001 D9 1557 chr3L 15478106 15478159 chr3L 15478301 15478354 8 195 1.5 1.5 1.5 3.2 248 chr3L 15478106 intergenic not near genes chr3L 15478230 intergenic not near genes chr3L 15478354 intergenic not near genes chr3L_8_15475001 chr3L_15475001 D9 1558 chr3L 15482299 15482337 chr3L 15482426 15482464 11 127 5.0 4.0 4.5 2.0 165 chr3L 15482299 intergenic not near genes chr3L 15482382 intergenic not near genes chr3L 15482464 intergenic not near genes chr3L_11_15480001 chr3L_15480001 D9 1559 chr3L 15515069 15515080 chr3L 15515172 15515184 6 104 11.0 5.0 8.0 0.7 115 chr3L 15515069 intergenic not near genes chr3L 15515126 intergenic not near genes chr3L 15515184 intergenic not near genes chr3L_6_15515001 chr3L_15515001 D9 1560 chr3L 15540914 15540924 chr3L 15541027 15541039 6 113 7.0 13.5 10.2 0.5 125 chr3L 15540914 intron CrebA + chr3L 15540976 intron CrebA + chr3L 15541039 intron CrebA + chr3L_6_15540001 chr3L_15540001 D9 1561 chr3L 15541596 15541640 chr3L 15541712 15541756 14 115 8.0 0.0 4.0 2.8 160 chr3L 15541596 intron CrebA + chr3L 15541676 intron CrebA + chr3L 15541756 intron CrebA + chr3L_14_15540001 chr3L_15540001 D9 1562 chr3L 15554899 15554946 chr3L 15556711 15556758 S-element 9 1812 4.5 6.5 5.5 1.4 1859 chr3L 15554899 intron AGO2 + chr3L 15555828 intron AGO2 + chr3L 15556758 intron AGO2 + chr3L_9_15555001 chr3L_15555001 D9 1563 chr3L 15600179 15600194 chr3L 15600302 15600320 6 126 4.0 3.0 3.5 1.3 141 chr3L 15600179 intron RhoGAP71E + chr3L 15600250 intron RhoGAP71E + chr3L 15600320 intron RhoGAP71E + chr3L_6_15600001 chr3L_15600001 D9 1564 chr3L 15633167 15633216 chr3L 15633272 15633321 8 105 2.0 3.5 2.8 2.1 154 chr3L 15633167 intron comm3 - chr3L 15633244 intron comm3 - chr3L 15633321 intron comm3 - chr3L_8_15630001 chr3L_15630001 D9 1565 chr3L 15641784 15641809 chr3L 15641893 15641919 5 109 0.0 2.0 1.0 2.5 135 chr3L 15641784 intron comm3 - chr3L 15641852 intron comm3 - chr3L 15641919 intron comm3 - chr3L_5_15640001 chr3L_15640001 D9 1566 chr3L 15732104 15732148 chr3L 15732210 15732254 4 106 5.0 0.0 2.5 1.1 150 chr3L 15732104 intergenic not near genes chr3L 15732179 intergenic not near genes chr3L 15732254 intergenic not near genes chr3L_4_15730001 chr3L_15730001 D9 1567 chr3L 15756855 15756899 chr3L 15756963 15757001 17 106 8.5 0.0 4.2 3.3 146 chr3L 15756855 intergenic not near genes chr3L 15756928 intergenic not near genes chr3L 15757001 intergenic not near genes chr3L_17_15755001 chr3L_15755001 D9 1568 chr3L 15769093 15769111 chr3L 15769215 15769233 7 122 0.5 4.5 2.5 2.0 140 chr3L 15769093 intergenic not near genes chr3L 15769163 intergenic not near genes chr3L 15769233 intergenic not near genes chr3L_7_15765001 chr3L_15765001 D9 1569 chr3L 15778502 15778550 chr3L 15778678 15778726 11 176 4.0 4.0 4.0 2.2 224 chr3L 15778502 intergenic not near genes chr3L 15778614 intergenic not near genes chr3L 15778726 intergenic not near genes chr3L_11_15775001 chr3L_15775001 D9 1570 chr3L 15833802 15833849 chr3L 15834016 15834063 8 214 18.0 18.0 18.0 0.4 261 chr3L 15833802 3` UTR,3` UTR CG12713 +,CG18081 - chr3L 15833932 3` UTR,3` UTR CG12713 +,CG18081 - chr3L 15834063 3` UTR CG18081 - chr3L_8_15830001 chr3L_15830001 D9 1571 chr3L 15840415 15840467 chr3L 15840526 15840577 9 111 4.0 7.5 5.8 1.3 162 chr3L 15840415 intron CG32150 - chr3L 15840496 intron CG32150 - chr3L 15840577 intron CG32150 - chr3L_9_15840001 chr3L_15840001 D9 1572 chr3L 15899207 15899253 chr3L 15899799 15899845 jockey 35 591 6.0 7.0 6.5 4.7 638 chr3L 15899207 intergenic pHCl - chr3L 15899526 intergenic pHCl - chr3L 15899845 intergenic sff - chr3L_35_15895001 chr3L_15895001 D9 1573 chr3L 15903496 15903501 chr3L 15903646 15903649 5 150 7.0 0.0 3.5 1.1 153 chr3L 15903496 intron sff - chr3L 15903572 intron sff - chr3L 15903649 intron sff - chr3L_5_15900001 chr3L_15900001 D9 1574 chr3L 15929214 15929230 chr3L 15938383 15938401 roo 4 9171 0.5 8.0 4.2 0.8 9187 chr3L 15929214 intron Pka-C3 - chr3L 15933808 intron Pka-C3 - chr3L 15938401 intron Pka-C3 - chr3L_4_15930001 chr3L_15930001 D9 1575 chr3L 15942207 15942229 chr3L 15942306 15942330 5 101 2.5 5.5 4.0 1.0 123 chr3L 15942207 intron Pka-C3 - chr3L 15942268 intron Pka-C3 - chr3L 15942330 intron Pka-C3 - chr3L_5_15940001 chr3L_15940001 D9 1576 chr3L 15989211 15989226 chr3L 15989319 15989334 8 108 6.5 8.5 7.5 0.9 123 chr3L 15989211 intron Hip14 + chr3L 15989272 intron Hip14 + chr3L 15989334 intron Hip14 + chr3L_8_15985001 chr3L_15985001 D9 1577 chr3L 15991479 15991531 chr3L 15991598 15991650 22 119 7.0 5.0 6.0 3.1 171 chr3L 15991479 3` UTR Hip14 + chr3L 15991564 3` UTR Hip14 + chr3L 15991650 3` UTR Hip14 + chr3L_22_15990001 chr3L_15990001 D9 1578 chr3L 16027220 16027271 chr3L 16027333 16027384 18 112 6.0 4.5 5.2 2.9 164 chr3L 16027220 intron Notum + chr3L 16027302 intron Notum + chr3L 16027384 intron Notum + chr3L_18_16025001 chr3L_16025001 D9 1579 chr3L 16140790 16140847 chr3L 16140907 16140964 57 109 12.5 12.5 12.5 4.2 174 chr3L 16140790 exon,3` UTR CG5151 -,CG32152 - chr3L 16140877 exon,3` UTR CG5151 -,CG32152 - chr3L 16140964 exon,3` UTR CG5151 -,CG32152 - chr3L_57_16140001 chr3L_16140001 D9 1580 chr3L 16182055 16182093 chr3L 16182200 16182238 12 145 0.0 5.5 2.8 3.2 183 chr3L 16182055 intergenic not near genes chr3L 16182146 intergenic not near genes chr3L 16182238 intergenic not near genes chr3L_12_16180001 chr3L_16180001 D9 1581 chr3L 16184088 16184135 chr3L 16188932 16188979 X-element 12 4844 0.5 8.5 4.5 2.2 4891 chr3L 16184088 intergenic not near genes chr3L 16186534 intergenic not near genes chr3L 16188979 intergenic not near genes chr3L_12_16185001 chr3L_16185001 D9 1582 chr3L 16192335 16192357 chr3L 16192439 16192461 7 103 3.0 7.0 5.0 1.2 126 chr3L 16192335 intergenic not near genes chr3L 16192398 intergenic not near genes chr3L 16192461 intergenic not near genes chr3L_7_16190001 chr3L_16190001 D9 1583 chr3L 16194309 16194366 chr3L 16194424 16194477 37 114 5.5 5.5 5.5 5.7 168 chr3L 16194309 intergenic not near genes chr3L 16194393 intergenic not near genes chr3L 16194477 intergenic not near genes chr3L_37_16190001 chr3L_16190001 D9 1584 chr3L 16212787 16212834 chr3L 16212903 16212949 12 116 5.0 0.5 2.8 3.2 162 chr3L 16212787 intergenic CG13073 - chr3L 16212868 intergenic CG13073 - chr3L 16212949 intergenic CG13073 - chr3L_12_16210001 chr3L_16210001 D9 1585 chr3L 16236331 16236340 chr3L 16236459 16236468 5 127 4.0 4.0 4.0 1.0 137 chr3L 16236331 3` UTR l(3)72Dp + chr3L 16236400 3` UTR l(3)72Dp + chr3L 16236468 3` UTR l(3)72Dp + chr3L_5_16235001 chr3L_16235001 D9 1586 chr3L 16241893 16241925 chr3L 16241999 16242034 14 109 4.0 3.5 3.8 2.9 141 chr3L 16241893 intergenic not near genes chr3L 16241964 intergenic not near genes chr3L 16242034 intergenic not near genes chr3L_14_16240001 chr3L_16240001 D9 1587 chr3L 16260286 16260332 chr3L 16260391 16260437 6 105 1.0 1.5 1.2 2.7 151 chr3L 16260286 intergenic not near genes chr3L 16260362 intergenic not near genes chr3L 16260437 intergenic not near genes chr3L_6_16260001 chr3L_16260001 D9 1588 chr3L 16279058 16279103 chr3L 16279167 16279209 8 108 4.5 2.0 3.2 1.9 151 chr3L 16279058 exon CG13050 - chr3L 16279134 intron CG13050 - chr3L 16279209 5` UTR CG13050 - chr3L_8_16275001 chr3L_16275001 D9 1589 chr3L 16359932 16360005 chr3L 16360226 16360283 7 288 0.0 4.5 2.2 2.2 351 chr3L 16359932 intron CG45057 - chr3L 16360108 intron CG45057 - chr3L 16360283 intron CG45057 - chr3L_7_16360001 chr3L_16360001 D9 1590 chr3L 16360859 16360916 chr3L 16360962 16361019 27 102 8.0 6.5 7.2 3.3 160 chr3L 16360859 intron CG45057 - chr3L 16360939 intron CG45057 - chr3L 16361019 intron CG45057 - chr3L_27_16360001 chr3L_16360001 D9 1591 chr3L 16375621 16375671 chr3L 16375738 16375788 56 116 18.5 12.5 15.5 3.4 167 chr3L 16375621 exon roq - chr3L 16375704 exon roq - chr3L 16375788 exon roq - chr3L_56_16375001 chr3L_16375001 D9 1592 chr3L 16375672 16375676 chr3L 16375737 16375793 5 106 14.0 11.5 12.8 0.4 121 chr3L 16375672 exon roq - chr3L 16375732 exon roq - chr3L 16375793 exon roq - chr3L_5_16375001 chr3L_16375001 D9 1593 chr3L 16443822 16443868 chr3L 16446189 16446233 Doc 14 2365 1.0 5.0 3.0 3.5 2411 chr3L 16443822 intron,intron CG33158 +,dsx-c73A - chr3L 16445028 intron,intron CG33158 +,dsx-c73A - chr3L 16446233 intron,intron CG33158 +,dsx-c73A - chr3L_14_16445001 chr3L_16445001 D9 1594 chr3L 16493953 16494004 chr3L 16494493 16494546 jockey 25 542 7.0 10.5 8.8 2.6 593 chr3L 16493953 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494250 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494546 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_25_16490001 chr3L_16490001 D9 1595 chr3L 16514523 16514559 chr3L 16514667 16514705 9 144 4.5 4.0 4.2 1.7 182 chr3L 16514523 intron CG43373 - chr3L 16514614 intron CG43373 - chr3L 16514705 intron CG43373 - chr3L_9_16510001 chr3L_16510001 D9 1596 chr3L 16533545 16533585 chr3L 16533681 16533721 8 136 2.0 10.5 6.2 1.1 176 chr3L 16533545 intron CG43373 - chr3L 16533633 intron CG43373 - chr3L 16533721 intron CG43373 - chr3L_8_16530001 chr3L_16530001 D9 1597 chr3L 16550036 16550077 chr3L 16550186 16550227 9 150 5.5 8.0 6.8 1.2 191 chr3L 16550036 intergenic not near genes chr3L 16550132 intergenic not near genes chr3L 16550227 intergenic not near genes chr3L_9_16550001 chr3L_16550001 D9 1598 chr3L 16560284 16560335 chr3L 16560392 16560445 16 110 5.5 3.5 4.5 2.9 161 chr3L 16560284 intergenic not near genes chr3L 16560364 intergenic not near genes chr3L 16560445 intergenic not near genes chr3L_16_16560001 chr3L_16560001 D9 1599 chr3L 16581743 16581795 chr3L 16582132 16582184 20 388 6.0 5.5 5.8 2.9 441 chr3L 16581743 5` UTR CR43727 + chr3L 16581964 5` UTR CR43727 + chr3L 16582184 5` UTR CR43727 + chr3L_20_16580001 chr3L_16580001 D9 1600 chr3L 16616495 16616533 chr3L 16621848 16621880 297 17 5352 3.5 8.0 5.8 2.5 5385 chr3L 16616495 3` UTR Abl - chr3L 16619188 3` UTR Abl - chr3L 16621880 3` UTR Abl - chr3L_17_16615001 chr3L_16615001 D9 1601 chr3L 16632202 16632259 chr3L 16632413 16632478 19 213 5.5 2.5 4.0 3.8 276 chr3L 16632202 intron Abl - chr3L 16632340 intron Abl - chr3L 16632478 intron Abl - chr3L_19_16630001 chr3L_16630001 D9 1602 chr3L 16684004 16684037 chr3L 16689260 16689293 copia 6 5256 7.0 3.5 5.2 1.0 5289 chr3L 16684004 intron,intron Lasp -,CG43954 - chr3L 16686648 intron,intron Lasp -,CG43954 - chr3L 16689293 intron,intron,5` UTR Lasp -,CG43954 -,CR45179 + chr3L_6_16685001 chr3L_16685001 D9 1603 chr3L 16749179 16749228 chr3L 16749279 16749329 16 101 6.5 2.5 4.5 2.9 150 chr3L 16749179 intergenic not near genes chr3L 16749254 intergenic not near genes chr3L 16749329 intergenic not near genes chr3L_16_16745001 chr3L_16745001 D9 1604 chr3L 16757619 16757669 chr3L 16757734 16757784 15 115 1.0 2.5 1.8 5.4 165 chr3L 16757619 intergenic not near genes chr3L 16757702 intergenic not near genes chr3L 16757784 intergenic not near genes chr3L_15_16755001 chr3L_16755001 D9 1605 chr3L 16770455 16770480 chr3L 16770567 16770595 5 114 0.0 2.0 1.0 2.5 140 chr3L 16770455 intron Nrt + chr3L 16770525 intron Nrt + chr3L 16770595 intron Nrt + chr3L_5_16770001 chr3L_16770001 D9 1606 chr3L 16817857 16817900 chr3L 16818016 16818065 23 164 6.0 7.0 6.5 3.1 208 chr3L 16817857 intron,intron nudC +,CG13024 - chr3L 16817961 intron,intron nudC +,CG13024 - chr3L 16818065 intron,intron nudC +,CG13024 - chr3L_23_16815001 chr3L_16815001 D9 1607 chr3L 16821269 16821287 chr3L 16821380 16821397 8 110 15.5 5.5 10.5 0.7 128 chr3L 16821269 intron CG13024 - chr3L 16821333 intron CG13024 - chr3L 16821397 intron CG13024 - chr3L_8_16820001 chr3L_16820001 D9 1608 chr3L 16844996 16845044 chr3L 16845134 16845182 9 137 4.5 3.5 4.0 1.8 186 chr3L 16844996 intergenic CG9669 -,CG9715 +,TSG101 + chr3L 16845089 intergenic CG9669 -,CG9715 + chr3L 16845182 intergenic CG9669 -,CG9715 + chr3L_9_16845001 chr3L_16845001 D9 1609 chr3L 16869555 16869605 chr3L 16869663 16869713 12 108 2.0 4.0 3.0 3.0 158 chr3L 16869555 intron Lmpt + chr3L 16869634 intron Lmpt + chr3L 16869713 intron Lmpt + chr3L_12_16865001 chr3L_16865001 D9 1610 chr3L 16875350 16875361 chr3L 16875521 16875532 4 171 1.5 0.0 0.8 2.2 182 chr3L 16875350 intron Lmpt + chr3L 16875441 intron Lmpt + chr3L 16875532 intron Lmpt + chr3L_4_16875001 chr3L_16875001 D9 1611 chr3L 16882296 16882303 chr3L 16882409 16882416 4 112 12.0 13.0 12.5 0.3 120 chr3L 16882296 intron Lmpt + chr3L 16882356 intron Lmpt + chr3L 16882416 intron Lmpt + chr3L_4_16880001 chr3L_16880001 D9 1612 chr3L 16941375 16941411 chr3L 16941501 16941537 13 125 13.5 0.0 6.8 1.7 162 chr3L 16941375 intron Cpr73D - chr3L 16941456 intron Cpr73D - chr3L 16941537 intron Cpr73D - chr3L_13_16940001 chr3L_16940001 D9 1613 chr3L 16945706 16945757 chr3L 16954884 16954935 roo 31 9178 10.0 4.0 7.0 3.9 9229 chr3L 16945706 exon Obp73a + chr3L 16950320 intergenic not near genes chr3L 16954935 5` UTR Nc73EF + chr3L_31_16950001 chr3L_16950001 D9 1614 chr3L 17034911 17034957 chr3L 17035124 17035170 G2 7 213 4.0 1.5 2.8 1.8 259 chr3L 17034911 intergenic not near genes chr3L 17035040 intergenic not near genes chr3L 17035170 intergenic beg + chr3L_7_17035001 chr3L_17035001 D9 1615 chr3L 17084982 17085032 chr3L 17094154 17094206 roo 20 9174 7.5 4.5 6.0 2.9 9224 chr3L 17084982 intron Rbp6 - chr3L 17089594 intron Rbp6 - chr3L 17094206 intron Rbp6 - chr3L_20_17085001 chr3L_17085001 D9 1616 chr3L 17117079 17117128 chr3L 17117189 17117238 22 109 8.0 8.5 8.2 2.4 159 chr3L 17117079 intron Rbp6 - chr3L 17117158 intron Rbp6 - chr3L 17117238 intron Rbp6 - chr3L_22_17115001 chr3L_17115001 D9 1617 chr3L 17120628 17120675 chr3L 17120729 17120776 9 101 5.5 3.5 4.5 1.6 148 chr3L 17120628 intron Rbp6 - chr3L 17120702 intron Rbp6 - chr3L 17120776 intron Rbp6 - chr3L_9_17120001 chr3L_17120001 D9 1618 chr3L 17149139 17149156 chr3L 17149245 17149262 7 105 10.5 0.0 5.2 1.1 123 chr3L 17149139 intron Rbp6 - chr3L 17149200 intron Rbp6 - chr3L 17149262 intron Rbp6 - chr3L_7_17145001 chr3L_17145001 D9 1619 chr3L 17247482 17247536 chr3L 17248959 17249013 15 1476 5.0 39.5 22.2 0.6 1531 chr3L 17247482 intron CR43870 + chr3L 17248248 intron CR43870 + chr3L 17249013 intron CR43870 + chr3L_15_17245001 chr3L_17245001 D9 1620 chr3L 17247574 17247636 chr3L 17249048 17249104 17 1471 14.0 72.5 43.2 0.4 1530 chr3L 17247574 intron CR43870 + chr3L 17248339 intron CR43870 + chr3L 17249104 intron CR43870 + chr3L_17_17245001 chr3L_17245001 D9 1621 chr3L 17272215 17272264 chr3L 17272373 17272422 23 157 6.5 5.5 6.0 3.3 207 chr3L 17272215 intergenic not near genes chr3L 17272318 intergenic not near genes chr3L 17272422 intergenic not near genes chr3L_23_17270001 chr3L_17270001 D9 1622 chr3L 17320859 17320913 chr3L 17320971 17321025 14 111 6.0 2.5 4.2 2.7 166 chr3L 17320859 intergenic CG6485 - chr3L 17320942 intergenic CG6485 - chr3L 17321025 intergenic CG6485 - chr3L_14_17320001 chr3L_17320001 D9 1623 chr3L 17331043 17331095 chr3L 17331158 17331210 12 115 2.0 1.5 1.8 4.3 167 chr3L 17331043 intergenic not near genes chr3L 17331126 intergenic not near genes chr3L 17331210 intergenic not near genes chr3L_12_17330001 chr3L_17330001 D9 1624 chr3L 17367416 17367455 chr3L 17367531 17367574 14 118 3.5 2.5 3.0 3.5 158 chr3L 17367416 intergenic CR45688 +,Cad74A - chr3L 17367495 intergenic CR45688 +,Cad74A - chr3L 17367574 intergenic Cad74A -,CR45688 + chr3L_14_17365001 chr3L_17365001 D9 1625 chr3L 17408899 17408918 chr3L 17409000 17409018 5 100 1.5 3.5 2.5 1.4 119 chr3L 17408899 intron blot - chr3L 17408958 intron blot - chr3L 17409018 intron blot - chr3L_5_17405001 chr3L_17405001 D9 1626 chr3L 17495208 17495259 chr3L 17495342 17495399 19 140 8.0 5.0 6.5 2.5 191 chr3L 17495208 intron,exon Oatp74D +,edin + chr3L 17495304 intron Oatp74D + chr3L 17495399 intron Oatp74D + chr3L_19_17495001 chr3L_17495001 D9 1627 chr3L 17498085 17498113 chr3L 17498187 17498215 14 102 8.5 3.0 5.8 2.1 130 chr3L 17498085 intron Oatp74D + chr3L 17498150 intron Oatp74D + chr3L 17498215 intron Oatp74D + chr3L_14_17495001 chr3L_17495001 D9 1628 chr3L 17510721 17510764 chr3L 17510830 17510873 29 109 9.0 14.5 11.8 2.3 152 chr3L 17510721 exon Oatp74D + chr3L 17510797 intron Oatp74D + chr3L 17510873 intron Oatp74D + chr3L_29_17510001 chr3L_17510001 D9 1629 chr3L 17516954 17517013 chr3L 17524537 17524563 412 20 7580 2.5 10.0 6.2 2.8 7609 chr3L 17516954 intron CG7564 + chr3L 17520758 intron CG7564 + chr3L 17524563 3` UTR CG7564 + chr3L_20_17520001 chr3L_17520001 D9 1630 chr3L 17535787 17535842 chr3L 17535926 17535981 24 139 7.0 4.0 5.5 3.7 194 chr3L 17535787 intron Nedd4 + chr3L 17535884 intron Nedd4 + chr3L 17535981 intron Nedd4 + chr3L_24_17535001 chr3L_17535001 D9 1631 chr3L 17580560 17580598 chr3L 17580761 17580797 11 201 6.0 0.0 3.0 2.8 237 chr3L 17580560 intron Eip74EF - chr3L 17580678 intron Eip74EF - chr3L 17580797 intron Eip74EF - chr3L_11_17580001 chr3L_17580001 D9 1632 chr3L 17592778 17592819 chr3L 17592894 17592935 14 116 0.0 2.0 1.0 7.0 157 chr3L 17592778 intron Eip74EF - chr3L 17592856 intron Eip74EF - chr3L 17592935 intron Eip74EF - chr3L_14_17590001 chr3L_17590001 D9 1633 chr3L 17662955 17662998 chr3L 17663060 17663103 30 102 11.5 17.0 14.2 2.0 148 chr3L 17662955 exon Crtc - chr3L 17663029 exon Crtc - chr3L 17663103 exon Crtc - chr3L_30_17660001 chr3L_17660001 D9 1634 chr3L 17730830 17730874 chr3L 17738185 17738229 mdg1 7 7355 2.0 2.5 2.2 2.2 7399 chr3L 17730830 intron Ccn + chr3L 17734530 intron Ccn + chr3L 17738229 intron Ccn + chr3L_7_17730001 chr3L_17730001 D9 1635 chr3L 17746475 17746527 chr3L 17746577 17746629 22 102 4.5 3.5 4.0 4.4 154 chr3L 17746475 intron,exon Ccn +,CG6034 - chr3L 17746552 intron,exon Ccn +,CG6034 - chr3L 17746629 intron,exon Ccn +,CG6034 - chr3L_22_17745001 chr3L_17745001 D9 1636 chr3L 17772419 17772472 chr3L 17772530 17772583 22 110 7.5 5.0 6.2 3.1 164 chr3L 17772419 intergenic not near genes chr3L 17772501 intergenic not near genes chr3L 17772583 intergenic not near genes chr3L_22_17770001 chr3L_17770001 D9 1637 chr3L 17789829 17789873 chr3L 17789930 17789974 11 101 0.5 4.5 2.5 3.1 145 chr3L 17789829 intergenic not near genes chr3L 17789902 intergenic not near genes chr3L 17789974 intergenic not near genes chr3L_11_17785001 chr3L_17785001 D9 1638 chr3L 17790594 17790635 chr3L 17790884 17790925 10 290 7.0 6.5 6.8 1.3 331 chr3L 17790594 intergenic CG42815 - chr3L 17790760 intergenic CG42815 - chr3L 17790925 intergenic CG42815 - chr3L_10_17790001 chr3L_17790001 D9 1639 chr3L 17799811 17799837 chr3L 17801623 17801649 S-element 8 1812 2.0 5.5 3.8 1.7 1838 chr3L 17799811 intron NUCB1 - chr3L 17800730 intron NUCB1 - chr3L 17801649 intron NUCB1 - chr3L_8_17800001 chr3L_17800001 D9 1640 chr3L 17834300 17834355 chr3L 17834489 17834544 5 189 0.0 2.5 1.2 2.3 244 chr3L 17834300 intron Grd + chr3L 17834422 intron Grd + chr3L 17834544 intron Grd + chr3L_5_17830001 chr3L_17830001 D9 1641 chr3L 17837603 17837656 chr3L 17837713 17837769 33 112 8.0 12.0 10.0 3.0 166 chr3L 17837603 exon Grd + chr3L 17837686 intron Grd + chr3L 17837769 exon Grd + chr3L_33_17835001 chr3L_17835001 D9 1642 chr3L 17918354 17918402 chr3L 17921182 17921230 opus 12 2828 4.0 2.5 3.2 2.9 2876 chr3L 17918354 intergenic not near genes chr3L 17919792 intergenic not near genes chr3L 17921230 intergenic not near genes chr3L_12_17915001 chr3L_17915001 D9 1643 chr3L 17921855 17921882 chr3L 17921967 17921994 5 112 5.0 3.5 4.2 1.0 139 chr3L 17921855 intergenic not near genes chr3L 17921924 intergenic not near genes chr3L 17921994 intergenic not near genes chr3L_5_17920001 chr3L_17920001 D9 1644 chr3L 17925574 17925612 chr3L 17925676 17925714 14 102 6.0 11.5 8.8 1.4 140 chr3L 17925574 intergenic not near genes chr3L 17925644 intergenic not near genes chr3L 17925714 intergenic not near genes chr3L_14_17925001 chr3L_17925001 D9 1645 chr3L 17957920 17957968 chr3L 17958023 17958071 5 102 16.0 18.0 17.0 0.3 151 chr3L 17957920 intron Eip75B - chr3L 17957996 intron Eip75B - chr3L 17958071 intron Eip75B - chr3L_5_17955001 chr3L_17955001 D9 1646 chr3L 18029936 18029954 chr3L 18030038 18030056 5 102 7.5 0.0 3.8 1.0 120 chr3L 18029936 intron Eip75B - chr3L 18029996 intron Eip75B - chr3L 18030056 intron Eip75B - chr3L_5_18025001 chr3L_18025001 D9 1647 chr3L 18042218 18042269 chr3L 18042321 18042371 13 103 4.0 1.5 2.8 3.4 153 chr3L 18042218 intron Eip75B - chr3L 18042294 intron Eip75B - chr3L 18042371 intron Eip75B - chr3L_13_18040001 chr3L_18040001 D9 1648 chr3L 18047684 18047738 chr3L 18056766 18056820 roo 11 9082 1.0 3.0 2.0 3.7 9136 chr3L 18047684 intron Eip75B - chr3L 18052252 intron Eip75B - chr3L 18056820 intron Eip75B - chr3L_11_18050001 chr3L_18050001 D9 1649 chr3L 18057952 18058010 chr3L 18058078 18058136 13 125 2.0 8.5 5.2 2.1 184 chr3L 18057952 intron Eip75B - chr3L 18058044 intron Eip75B - chr3L 18058136 intron Eip75B - chr3L_13_18055001 chr3L_18055001 D9 1650 chr3L 18118209 18118240 chr3L 18118312 18118342 7 103 0.5 4.0 2.2 2.2 133 chr3L 18118209 3` UTR,intron CG32195 +,CG7341 + chr3L 18118276 3` UTR,intron CG32195 +,CG7341 + chr3L 18118342 3` UTR,intron CG32195 +,CG7341 + chr3L_7_18115001 chr3L_18115001 D9 1651 chr3L 18119617 18119677 chr3L 18119752 18119800 6 125 0.0 5.0 2.5 1.7 183 chr3L 18119617 intron CG7341 + chr3L 18119708 intron CG7341 + chr3L 18119800 5` UTR CG7341 + chr3L_6_18115001 chr3L_18115001 D9 1652 chr3L 18135737 18135754 chr3L 18135842 18135858 7 104 0.5 2.5 1.5 2.8 121 chr3L 18135737 intergenic CR44669 - chr3L 18135798 3` UTR CR44669 - chr3L 18135858 3` UTR CR44669 - chr3L_7_18135001 chr3L_18135001 D9 1653 chr3L 18152709 18152754 chr3L 18152845 18152889 4 134 0.0 1.0 0.5 2.7 180 chr3L 18152709 intron CG7330 + chr3L 18152799 intron CG7330 + chr3L 18152889 intron CG7330 + chr3L_4_18150001 chr3L_18150001 D9 1654 chr3L 18160851 18160901 chr3L 18160965 18161015 15 114 3.0 3.0 3.0 3.8 164 chr3L 18160851 intron CG13699 - chr3L 18160933 intron CG13699 - chr3L 18161015 intron CG13699 - chr3L_15_18160001 chr3L_18160001 D9 1655 chr3L 18163960 18164234 chr3L 18164187 18164426 9 214 0.0 0.0 0.0 9.0 466 chr3L 18163960 intergenic not near genes chr3L 18164193 intergenic not near genes chr3L 18164426 intergenic not near genes chr3L_9_18160001 chr3L_18160001 D9 1656 chr3L 18198930 18198931 chr3L 24821494 24821494 5 6622563 14.5 12.0 13.2 0.4 6622564 chr3L 18198930 intergenic not near genes chr3L 21510212 intron M6 + chr3L 24821494 intergenic not near genes chr3L_5_21510001 chr3L_21510001 D9 1657 chr3L 18200900 18200963 chr3L 18201317 18201368 13 413 0.0 3.0 1.5 5.2 468 chr3L 18200900 intergenic not near genes chr3L 18201134 intergenic CG7320 + chr3L 18201368 intergenic CG7320 + chr3L_13_18200001 chr3L_18200001 D9 1658 chr3L 18226070 18226099 chr3L 18226180 18226209 5 110 0.0 3.0 1.5 2.0 139 chr3L 18226070 intergenic not near genes chr3L 18226140 intergenic not near genes chr3L 18226209 intergenic not near genes chr3L_5_18225001 chr3L_18225001 D9 1659 chr3L 18251741 18251778 chr3L 18251859 18251896 11 117 2.0 4.5 3.2 2.6 155 chr3L 18251741 intergenic CheA75a + chr3L 18251818 intergenic CheA75a + chr3L 18251896 intergenic CheA75a + chr3L_11_18250001 chr3L_18250001 D9 1660 chr3L 18257116 18257166 chr3L 18257219 18257267 14 103 8.0 3.0 5.5 2.2 151 chr3L 18257116 intergenic not near genes chr3L 18257192 intergenic not near genes chr3L 18257267 intergenic not near genes chr3L_14_18255001 chr3L_18255001 D9 1661 chr3L 18301329 18301373 chr3L 18301443 18301487 5 114 0.5 2.5 1.5 2.0 158 chr3L 18301329 intergenic CG13700 - chr3L 18301408 intergenic CG13700 - chr3L 18301487 intergenic CG13700 - chr3L_5_18300001 chr3L_18300001 D9 1662 chr3L 18408708 18408757 chr3L 18408819 18408868 7 111 2.0 2.5 2.2 2.2 160 chr3L 18408708 intergenic not near genes chr3L 18408788 intergenic not near genes chr3L 18408868 intergenic not near genes chr3L_7_18405001 chr3L_18405001 D9 1663 chr3L 9013690 9013695 chr3L 18417066 18417066 6 9403374 48.5 31.0 39.8 0.1 9403376 chr3L 9013690 intron Doc2 - chr3L 13715378 intron bru-3 - chr3L 18417066 intergenic not near genes chr3L_6_13715001 chr3L_13715001 D9 1664 chr3L 18436036 18436088 chr3L 18436159 18436208 9 123 1.5 3.0 2.2 2.8 172 chr3L 18436036 intergenic not near genes chr3L 18436122 intergenic not near genes chr3L 18436208 intergenic not near genes chr3L_9_18435001 chr3L_18435001 D9 1665 chr3L 18448597 18448615 chr3L 18448714 18448732 4 117 8.0 1.5 4.8 0.7 135 chr3L 18448597 intergenic not near genes chr3L 18448664 intergenic not near genes chr3L 18448732 intergenic not near genes chr3L_4_18445001 chr3L_18445001 D9 1666 chr3L 18456248 18456296 chr3L 18456361 18456409 10 113 4.5 1.5 3.0 2.5 161 chr3L 18456248 intergenic CR44670 - chr3L 18456328 intergenic CR44670 - chr3L 18456409 3` UTR CR44670 - chr3L_10_18455001 chr3L_18455001 D9 1667 chr3L 18464465 18464515 chr3L 18464573 18464619 17 100 3.0 6.0 4.5 3.1 154 chr3L 18464465 intergenic not near genes chr3L 18464542 intergenic not near genes chr3L 18464619 intergenic not near genes chr3L_17_18460001 chr3L_18460001 D9 1668 chr3L 18479036 18479076 chr3L 18479163 18479203 16 127 5.5 3.5 4.5 2.9 167 chr3L 18479036 5` UTR CR44673 + chr3L 18479120 5` UTR CR44673 + chr3L 18479203 5` UTR CR44673 + chr3L_16_18475001 chr3L_18475001 D9 1669 chr3L 18506116 18506152 chr3L 18509604 18509640 F-element 7 3488 3.0 4.5 3.8 1.5 3524 chr3L 18506116 intergenic not near genes chr3L 18507878 intergenic not near genes chr3L 18509640 intergenic not near genes chr3L_7_18505001 chr3L_18505001 D9 1670 chr3L 18528606 18528653 chr3L 18537791 18537839 roo 12 9186 2.5 1.5 2.0 4.0 9233 chr3L 18528606 intergenic not near genes chr3L 18533222 intergenic not near genes chr3L 18537839 intergenic not near genes chr3L_12_18530001 chr3L_18530001 D9 1671 chr3L 18546679 18546735 chr3L 18546798 18546854 19 119 4.0 6.0 5.0 3.2 175 chr3L 18546679 intergenic not near genes chr3L 18546766 intergenic not near genes chr3L 18546854 intergenic not near genes chr3L_19_18545001 chr3L_18545001 D9 1672 chr3L 18593926 18593952 chr3L 18595931 18595957 Doc 12 2005 9.5 0.5 5.0 2.0 2031 chr3L 18593926 intergenic term - chr3L 18594942 intergenic not near genes chr3L 18595957 intergenic CR45389 + chr3L_12_18590001 chr3L_18590001 D9 1673 chr3L 18638576 18638604 chr3L 18638695 18638723 6 119 2.0 4.5 3.2 1.4 147 chr3L 18638576 intron MYPT-75D + chr3L 18638650 intron MYPT-75D + chr3L 18638723 intron MYPT-75D + chr3L_6_18635001 chr3L_18635001 D9 1674 chr3L 18656162 18656208 chr3L 18656272 18656318 22 110 9.5 9.0 9.2 2.2 156 chr3L 18656162 intron MYPT-75D + chr3L 18656240 intron MYPT-75D + chr3L 18656318 intron MYPT-75D + chr3L_22_18655001 chr3L_18655001 D9 1675 chr3L 18657718 18657766 chr3L 18657882 18657930 24 162 5.0 6.0 5.5 3.7 212 chr3L 18657718 intron MYPT-75D + chr3L 18657824 intron MYPT-75D + chr3L 18657930 intron MYPT-75D + chr3L_24_18655001 chr3L_18655001 D9 1676 chr3L 18686938 18686986 chr3L 18687394 18687442 16 455 6.5 3.0 4.8 2.8 504 chr3L 18686938 intergenic not near genes chr3L 18687190 intergenic not near genes chr3L 18687442 intergenic not near genes chr3L_16_18685001 chr3L_18685001 D9 1677 chr3L 18696050 18696099 chr3L 18696194 18696243 25 143 6.0 8.5 7.2 3.0 193 chr3L 18696050 intergenic Dic4 -,CG6893 + chr3L 18696146 intergenic Dic4 -,CG6893 + chr3L 18696243 intergenic Dic4 - chr3L_25_18695001 chr3L_18695001 D9 1678 chr3L 18710766 18710791 chr3L 18718741 18718766 Stalker2 9 7974 3.5 4.0 3.8 1.9 8000 chr3L 18710766 intergenic not near genes chr3L 18714766 intergenic not near genes chr3L 18718766 intergenic not near genes chr3L_9_18710001 chr3L_18710001 D9 1679 chr3L 18721752 18721795 chr3L 18721868 18721911 7 116 7.5 2.5 5.0 1.2 159 chr3L 18721752 intergenic CG12477 - chr3L 18721832 intergenic CG12477 - chr3L 18721911 3` UTR CG12477 - chr3L_7_18720001 chr3L_18720001 D9 1680 chr3L 18753527 18753564 chr3L 18753634 18753671 8 107 3.0 1.5 2.2 2.5 144 chr3L 18753527 intron ftz-f1 - chr3L 18753599 intron ftz-f1 - chr3L 18753671 intron ftz-f1 - chr3L_8_18750001 chr3L_18750001 D9 1681 chr3L 18772393 18772432 chr3L 18781099 18781138 roo 6 8706 7.0 6.5 6.8 0.8 8745 chr3L 18772393 intron ftz-f1 - chr3L 18776766 intron ftz-f1 - chr3L 18781138 intron ftz-f1 - chr3L_6_18775001 chr3L_18775001 D9 1682 chr3L 18797287 18797332 chr3L 18797396 18797441 15 109 3.0 7.5 5.2 2.4 154 chr3L 18797287 intron ftz-f1 - chr3L 18797364 intron ftz-f1 - chr3L 18797441 intron ftz-f1 - chr3L_15_18795001 chr3L_18795001 D9 1683 chr3L 18810120 18810174 chr3L 18810222 18810281 7 104 1.0 0.0 0.5 4.7 161 chr3L 18810120 intron CG14073 - chr3L 18810200 intron CG14073 - chr3L 18810281 intron CG14073 - chr3L_7_18810001 chr3L_18810001 D9 1684 chr3L 18924458 18924509 chr3L 18924559 18924610 10 101 3.0 1.0 2.0 3.3 152 chr3L 18924458 intron CG32204 - chr3L 18924534 intron CG32204 - chr3L 18924610 intron CG32204 - chr3L_10_18920001 chr3L_18920001 D9 1685 chr3L 18933069 18933121 chr3L 18933179 18933230 9 110 2.0 2.0 2.0 3.0 161 chr3L 18933069 intron CG32204 - chr3L 18933150 intron CG32204 - chr3L 18933230 intron CG32204 - chr3L_9_18930001 chr3L_18930001 D9 1686 chr3L 18969574 18969627 chr3L 18969695 18969748 31 119 4.0 11.5 7.8 3.5 174 chr3L 18969574 intergenic not near genes chr3L 18969661 intergenic not near genes chr3L 18969748 intergenic not near genes chr3L_31_18965001 chr3L_18965001 D9 1687 chr3L 19008828 19008870 chr3L 19009191 19009233 jockey 12 363 3.5 8.0 5.8 1.8 405 chr3L 19008828 intron nkd - chr3L 19009030 intron nkd - chr3L 19009233 intron nkd - chr3L_12_19005001 chr3L_19005001 D9 1688 chr3L 19015157 19015191 chr3L 19015266 19015297 8 108 11.0 2.0 6.5 1.1 140 chr3L 19015157 intron nkd - chr3L 19015227 intron nkd - chr3L 19015297 intron nkd - chr3L_8_19015001 chr3L_19015001 D9 1689 chr3L 19025907 19025971 chr3L 19026016 19026081 18 109 8.0 0.0 4.0 3.6 174 chr3L 19025907 intron nkd - chr3L 19025994 intron nkd - chr3L 19026081 intron nkd - chr3L_18_19025001 chr3L_19025001 D9 1690 chr3L 19082012 19082064 chr3L 19082139 19082191 22 127 5.5 4.5 5.0 3.7 179 chr3L 19082012 intron Mkp3 - chr3L 19082102 intron Mkp3 - chr3L 19082191 intron Mkp3 - chr3L_22_19080001 chr3L_19080001 D9 1691 chr3L 19114187 19114222 chr3L 19114321 19114344 7 134 2.5 2.5 2.5 2.0 157 chr3L 19114187 intron CG14082 - chr3L 19114266 intron CG14082 - chr3L 19114344 intron CG14082 - chr3L_7_19110001 chr3L_19110001 D9 1692 chr3L 19117020 19117075 chr3L 19124492 19124547 mdg1 20 7472 8.0 3.5 5.8 2.9 7527 chr3L 19117020 intron CG14082 - chr3L 19120784 intron CG14082 - chr3L 19124547 intron CG14082 - chr3L_20_19120001 chr3L_19120001 D9 1693 chr3L 19131310 19131358 chr3L 19132828 19132876 20 1519 49.5 58.0 53.8 0.4 1566 chr3L 19131310 intron CG14082 - chr3L 19132093 intron CG14082 - chr3L 19132876 intron CG14082 - chr3L_20_19130001 chr3L_19130001 D9 1694 chr3L 19133646 19133701 chr3L 19133755 19133804 12 108 1.5 5.5 3.5 2.7 158 chr3L 19133646 intron CG14082 - chr3L 19133725 intron CG14082 - chr3L 19133804 intron CG14082 - chr3L_12_19130001 chr3L_19130001 D9 1695 chr3L 19138129 19138155 chr3L 19138236 19138272 7 117 0.0 3.0 1.5 2.8 143 chr3L 19138129 intron CG14082 - chr3L 19138200 intron CG14082 - chr3L 19138272 intron CG14082 - chr3L_7_19135001 chr3L_19135001 D9 1696 chr3L 19182363 19182418 chr3L 19182469 19182524 20 106 4.0 9.5 6.8 2.6 161 chr3L 19182363 intron fz2 - chr3L 19182444 intron fz2 - chr3L 19182524 intron fz2 - chr3L_20_19180001 chr3L_19180001 D9 1697 chr3L 19186417 19186425 chr3L 19186534 19186542 7 117 2.5 5.5 4.0 1.4 125 chr3L 19186417 intron fz2 - chr3L 19186480 intron fz2 - chr3L 19186542 intron fz2 - chr3L_7_19185001 chr3L_19185001 D9 1698 chr3L 19208036 19208092 chr3L 19209435 19209491 Doc 20 1398 3.5 5.5 4.5 3.6 1455 chr3L 19208036 intron fz2 - chr3L 19208764 intron fz2 - chr3L 19209491 intron fz2 - chr3L_20_19205001 chr3L_19205001 D9 1699 chr3L 19220633 19220637 chr3L 22908066 22908067 57 3687431 31.5 25.0 28.2 2.0 3687434 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908067 intergenic not near genes chr3L_57_21060001 chr3L_21060001 D9 1700 chr3L 19238382 19238421 chr3L 19238953 19238992 12 571 4.5 7.5 6.0 1.7 610 chr3L 19238382 intergenic not near genes chr3L 19238687 intergenic not near genes chr3L 19238992 intergenic not near genes chr3L_12_19235001 chr3L_19235001 D9 1701 chr3L 19248828 19248856 chr3L 19248943 19248969 4 114 6.5 2.5 4.5 0.7 141 chr3L 19248828 intergenic not near genes chr3L 19248898 intergenic not near genes chr3L 19248969 intergenic not near genes chr3L_4_19245001 chr3L_19245001 D9 1702 chr3L 19269790 19269846 chr3L 19270019 19270073 26 228 9.0 4.5 6.8 3.3 283 chr3L 19269790 intron,exon CG14085 +,CG14088 - chr3L 19269932 intron,exon CG14085 +,CG14088 - chr3L 19270073 intron,exon CG14085 +,CG14088 - chr3L_26_19265001 chr3L_19265001 D9 1703 chr3L 19282241 19282292 chr3L 19282362 19282413 14 121 1.5 7.0 4.2 2.7 172 chr3L 19282241 3` UTR Gbs-76A - chr3L 19282327 3` UTR Gbs-76A - chr3L 19282413 3` UTR Gbs-76A - chr3L_14_19280001 chr3L_19280001 D9 1704 chr3L 19325382 19325433 chr3L 19325484 19325535 17 102 3.0 4.5 3.8 3.5 153 chr3L 19325382 intron pip - chr3L 19325458 intron pip - chr3L 19325535 intron pip - chr3L_17_19325001 chr3L_19325001 D9 1705 chr3L 19342746 19342775 chr3L 19342862 19342891 4 115 1.0 4.0 2.5 1.1 145 chr3L 19342746 3` UTR CG32206 - chr3L 19342818 3` UTR CG32206 - chr3L 19342891 3` UTR CG32206 - chr3L_4_19340001 chr3L_19340001 D9 1706 chr3L 19398913 19398931 chr3L 19403655 19403673 F-element 12 4742 3.0 9.5 6.2 1.7 4760 chr3L 19398913 intron CG32206 - chr3L 19401293 intron CG32206 - chr3L 19403673 intron CG32206 - chr3L_12_19400001 chr3L_19400001 D9 1707 chr3L 19417782 19417834 chr3L 19417883 19417939 21 104 7.0 10.5 8.8 2.1 157 chr3L 19417782 intergenic not near genes chr3L 19417860 intergenic not near genes chr3L 19417939 intergenic not near genes chr3L_21_19415001 chr3L_19415001 D9 1708 chr3L 19426732 19426777 chr3L 19426826 19426879 38 102 16.0 8.0 12.0 2.9 147 chr3L 19426732 intergenic not near genes chr3L 19426806 intergenic not near genes chr3L 19426879 intergenic not near genes chr3L_38_19425001 chr3L_19425001 D9 1709 chr3L 19434739 19434791 chr3L 19434843 19434895 9 104 1.5 3.5 2.5 2.6 156 chr3L 19434739 intergenic not near genes chr3L 19434817 intergenic not near genes chr3L 19434895 intergenic not near genes chr3L_9_19430001 chr3L_19430001 D9 1710 chr3L 19488476 19488489 chr3L 19488580 19488596 4 106 12.0 4.5 8.2 0.4 120 chr3L 19488476 intergenic pncr009:3L -,CG32212 + chr3L 19488536 intergenic pncr009:3L -,CG32212 + chr3L 19488596 intergenic pncr009:3L -,CG32212 + chr3L_4_19485001 chr3L_19485001 D9 1711 chr3L 19783418 19783465 chr3L 19783716 19783762 15 297 6.0 4.0 5.0 2.5 344 chr3L 19783418 intron,intron CG42637 -,Gyc76C - chr3L 19783590 intron,intron CG42637 -,Gyc76C - chr3L 19783762 intron,intron CG42637 -,Gyc76C - chr3L_15_19780001 chr3L_19780001 D9 1712 chr3L 19820273 19820306 chr3L 19827847 19827880 412 10 7574 4.0 1.5 2.8 2.6 7607 chr3L 19820273 intron Deaf1 + chr3L 19824076 intron Deaf1 + chr3L 19827880 intron Deaf1 + chr3L_10_19820001 chr3L_19820001 D9 1713 chr3L 19848484 19848523 chr3L 19857699 19857738 roo 12 9214 4.5 2.0 3.2 2.9 9254 chr3L 19848484 intron Papss + chr3L 19853111 intron Papss + chr3L 19857738 intron Papss + chr3L_12_19850001 chr3L_19850001 D9 1714 chr3L 19861795 19861849 chr3L 19863608 19863662 S-element 16 1813 4.0 1.5 2.8 4.2 1867 chr3L 19861795 5` UTR CR45433 + chr3L 19862728 intergenic not near genes chr3L 19863662 intergenic not near genes chr3L_16_19860001 chr3L_19860001 D9 1715 chr3L 19880651 19880706 chr3L 19885045 19885098 35 4393 90.0 85.0 87.5 0.4 4447 chr3L 19880651 exon CG8334 + chr3L 19882874 exon Mi-2 - chr3L 19885098 exon Mi-2 - chr3L_35_19880001 chr3L_19880001 D9 1716 chr3L 19933512 19933556 chr3L 19934359 19934402 10 847 2.5 3.5 3.0 2.5 890 chr3L 19933512 intergenic CR45678 + chr3L 19933957 5` UTR CR45678 + chr3L 19934402 intergenic CR45678 + chr3L_10_19930001 chr3L_19930001 D9 1717 chr3L 19935422 19935472 chr3L 19937007 19937057 24 1585 6.5 5.0 5.8 3.5 1635 chr3L 19935422 intergenic not near genes chr3L 19936240 intergenic not near genes chr3L 19937057 intergenic not near genes chr3L_24_19935001 chr3L_19935001 D9 1718 chr3L 19981180 19981231 chr3L 19981285 19981333 17 104 4.5 0.5 2.5 4.9 153 chr3L 19981180 intergenic not near genes chr3L 19981256 intergenic CG17732 + chr3L 19981333 intergenic CG17732 + chr3L_17_19980001 chr3L_19980001 D9 1719 chr3L 20033851 20033894 chr3L 20033952 20033995 7 101 1.0 4.5 2.8 1.8 144 chr3L 20033851 intergenic not near genes chr3L 20033923 intergenic not near genes chr3L 20033995 intergenic not near genes chr3L_7_20030001 chr3L_20030001 D9 1720 chr3L 20083416 20083423 chr3L 20083522 20083529 4 106 24.0 17.0 20.5 0.2 113 chr3L 20083416 intron sNPF-R - chr3L 20083472 intron sNPF-R - chr3L 20083529 intron sNPF-R - chr3L_4_20080001 chr3L_20080001 D9 1721 chr3L 20086767 20086816 chr3L 20086870 20086917 4 102 2.0 3.0 2.5 1.1 150 chr3L 20086767 intron sNPF-R - chr3L 20086842 intron sNPF-R - chr3L 20086917 intron sNPF-R - chr3L_4_20085001 chr3L_20085001 D9 1722 chr3L 20113640 20113682 chr3L 20122922 20122964 roo 8 9280 2.0 3.0 2.5 2.3 9324 chr3L 20113640 intergenic not near genes chr3L 20118302 intergenic not near genes chr3L 20122964 intergenic not near genes chr3L_8_20115001 chr3L_20115001 D9 1723 chr3L 20143064 20143107 chr3L 20143169 20143212 14 105 4.0 3.0 3.5 3.1 148 chr3L 20143064 intergenic not near genes chr3L 20143138 intergenic not near genes chr3L 20143212 intergenic not near genes chr3L_14_20140001 chr3L_20140001 D9 1724 chr3L 20148259 20148318 chr3L 20148374 20148431 20 114 3.5 5.5 4.5 3.6 172 chr3L 20148259 intergenic not near genes chr3L 20148345 intergenic not near genes chr3L 20148431 intergenic not near genes chr3L_20_20145001 chr3L_20145001 D9 1725 chr3L 20156140 20156189 chr3L 20156287 20156336 18 146 4.0 3.5 3.8 3.8 196 chr3L 20156140 intron CG42674 - chr3L 20156238 intron CG42674 - chr3L 20156336 intron CG42674 - chr3L_18_20155001 chr3L_20155001 D9 1726 chr3L 20187442 20187484 chr3L 20187546 20187588 4 104 17.0 16.5 16.8 0.2 146 chr3L 20187442 intron CG42674 - chr3L 20187515 intron CG42674 - chr3L 20187588 intron CG42674 - chr3L_4_20185001 chr3L_20185001 D9 1727 chr3L 20257307 20257358 chr3L 20258452 20258503 pogo 14 1144 3.5 4.0 3.8 2.9 1196 chr3L 20257307 intron rdgC + chr3L 20257905 intron rdgC + chr3L 20258503 intron rdgC + chr3L_14_20255001 chr3L_20255001 D9 1728 chr3L 20283354 20283410 chr3L 20283459 20283515 22 104 2.5 5.5 4.0 4.4 161 chr3L 20283354 intron gogo - chr3L 20283434 intron gogo - chr3L 20283515 intron gogo - chr3L_22_20280001 chr3L_20280001 D9 1729 chr3L 20321119 20321129 chr3L 20342900 20342910 17.6 5 21781 11.0 25.5 18.2 0.3 21791 chr3L 20321119 exon Spn77Bb + chr3L 20332014 intergenic not near genes chr3L 20342910 exon Spn77Bc + chr3L_5_20330001 chr3L_20330001 D9 1730 chr3L 20386913 20386972 chr3L 20387039 20387099 20 127 3.5 2.0 2.8 5.3 186 chr3L 20386913 intron fbl + chr3L 20387006 intron fbl + chr3L 20387099 intron fbl + chr3L_20_20385001 chr3L_20385001 D9 1731 chr3L 20462586 20462600 chr3L 20462690 20462705 5 105 3.5 6.0 4.8 0.9 119 chr3L 20462586 intron atk - chr3L 20462646 intron atk - chr3L 20462705 intron atk - chr3L_5_20460001 chr3L_20460001 D9 1732 chr3L 20476734 20476782 chr3L 20484356 20484406 springer 12 7624 4.0 4.0 4.0 2.4 7672 chr3L 20476734 3` UTR isoQC + chr3L 20480570 intergenic not near genes chr3L 20484406 3` UTR ZnT77C - chr3L_12_20480001 chr3L_20480001 D9 1733 chr3L 20487644 20487673 chr3L 20488120 20488149 INE-1 19 476 9.5 9.5 9.5 1.8 505 chr3L 20487644 intron ZnT77C - chr3L 20487896 intron ZnT77C - chr3L 20488149 exon ZnT77C - chr3L_19_20485001 chr3L_20485001 D9 1734 chr3L 20525229 20525229 chr3L 24821492 24821494 5 4296264 22.5 12.5 17.5 0.3 4296265 chr3L 20525229 intron CG4825 - chr3L 22673362 intron CG14457 + chr3L 24821494 intergenic not near genes chr3L_5_22670001 chr3L_22670001 D9 1735 chr3L 20525230 20525230 chr3L 24821492 24821494 7 4296263 22.0 12.5 17.2 0.4 4296264 chr3L 20525230 intron CG4825 - chr3L 22673362 intron CG14457 + chr3L 24821494 intergenic not near genes chr3L_7_22670001 chr3L_22670001 D9 1736 chr3L 20590040 20590093 chr3L 20590604 20590657 412 19 563 6.0 4.5 5.2 3.1 617 chr3L 20590040 intergenic not near genes chr3L 20590348 intergenic not near genes chr3L 20590657 intergenic not near genes chr3L_19_20590001 chr3L_20590001 D9 1737 chr3L 20752092 20752138 chr3L 20752195 20752241 28 103 9.5 6.0 7.8 3.2 149 chr3L 20752092 intergenic not near genes chr3L 20752166 intergenic not near genes chr3L 20752241 intergenic not near genes chr3L_28_20750001 chr3L_20750001 D9 1738 chr3L 20821271 20821292 chr3L 20824765 20824786 NOF 6 3494 4.5 5.0 4.8 1.0 3515 chr3L 20821271 intron Pka-R1 + chr3L 20823028 intron Pka-R1 + chr3L 20824786 intron Pka-R1 + chr3L_6_20820001 chr3L_20820001 D9 1739 chr3L 20826337 20826390 chr3L 20826553 20826606 15 215 5.5 7.0 6.2 2.1 269 chr3L 20826337 intron Pka-R1 + chr3L 20826472 intron Pka-R1 + chr3L 20826606 intron Pka-R1 + chr3L_15_20825001 chr3L_20825001 D9 1740 chr3L 20849246 20849300 chr3L 20849350 20849404 7 104 5.5 2.5 4.0 1.4 158 chr3L 20849246 intron CG32432 - chr3L 20849325 intron CG32432 - chr3L 20849404 intron CG32432 - chr3L_7_20845001 chr3L_20845001 D9 1741 chr3L 20913729 20913779 chr3L 20913835 20913886 19 106 2.5 8.5 5.5 2.9 157 chr3L 20913729 intergenic CR43930 - chr3L 20913808 intergenic CR43930 - chr3L 20913886 intergenic CR43930 - chr3L_19_20910001 chr3L_20910001 D9 1742 chr3L 21014889 21014943 chr3L 21023395 21023449 Tirant 26 8505 9.5 6.0 7.8 3.0 8560 chr3L 21014889 intron skd - chr3L 21019169 intron skd - chr3L 21023449 intron skd - chr3L_26_21015001 chr3L_21015001 D9 1743 chr3L 21067931 21067981 chr3L 21068036 21068085 18 104 4.0 8.0 6.0 2.6 154 chr3L 21067931 intron siz + chr3L 21068008 intron siz + chr3L 21068085 intron siz + chr3L_18_21065001 chr3L_21065001 D9 1744 chr3L 21082187 21082240 chr3L 21082290 21082341 28 103 4.5 10.0 7.2 3.4 154 chr3L 21082187 intron ko - chr3L 21082264 intron ko - chr3L 21082341 intron ko - chr3L_28_21080001 chr3L_21080001 D9 1745 chr3L 21151848 21151897 chr3L 21156957 21157005 flea 22 5109 5.5 6.0 5.8 3.2 5157 chr3L 21151848 intron Ac78C - chr3L 21154426 intron Ac78C - chr3L 21157005 intron Ac78C - chr3L_22_21150001 chr3L_21150001 D9 1746 chr3L 21158574 21158625 chr3L 21158675 21158726 9 99 4.0 3.5 3.8 1.9 152 chr3L 21158574 intron Ac78C - chr3L 21158650 intron Ac78C - chr3L 21158726 intron Ac78C - chr3L_9_21155001 chr3L_21155001 D9 1747 chr3L 21172813 21172871 chr3L 21172937 21172999 14 127 1.0 2.0 1.5 5.6 186 chr3L 21172813 intergenic chb +,asparagine-synthetase + chr3L 21172906 5` UTR chb + chr3L 21172999 5` UTR chb + chr3L_14_21170001 chr3L_21170001 D9 1748 chr3L 21186034 21186043 chr3L 21186129 21186140 6 99 23.0 10.0 16.5 0.3 106 chr3L 21186034 intron CG42337 - chr3L 21186087 intron CG42337 - chr3L 21186140 intron CG42337 - chr3L_6_21185001 chr3L_21185001 D9 1749 chr3L 21186044 21186083 chr3L 21186128 21186184 24 99 13.5 9.5 11.5 1.9 140 chr3L 21186044 intron CG42337 - chr3L 21186114 intron CG42337 - chr3L 21186184 intron CG42337 - chr3L_24_21185001 chr3L_21185001 D9 1750 chr3L 21243723 21243739 chr3L 21251311 21251327 412 7 7586 9.5 6.0 7.8 0.8 7604 chr3L 21243723 intron Eip78C + chr3L 21247525 intron Eip78C + chr3L 21251327 intron Eip78C + chr3L_7_21245001 chr3L_21245001 D9 1751 chr3L 21306126 21306176 chr3L 21315309 21315360 roo 18 9184 7.0 4.0 5.5 2.8 9234 chr3L 21306126 3` UTR CG7632 + chr3L 21310743 intron Pc - chr3L 21315360 3` UTR Pc - chr3L_18_21310001 chr3L_21310001 D9 1752 chr3L 21319505 21319559 chr3L 21319620 21319673 17 115 4.0 5.0 4.5 3.1 168 chr3L 21319505 5` UTR Rab26 + chr3L 21319589 5` UTR Rab26 + chr3L 21319673 5` UTR Rab26 + chr3L_17_21315001 chr3L_21315001 D9 1753 chr3L 22362143 22362194 chr3L 22363104 22363155 5 961 17.0 25.0 21.0 0.2 1012 chr3L 22362143 intron Ten-m - chr3L 22362649 intron Ten-m - chr3L 22363155 intron Ten-m - chr3L_5_22360001 chr3L_22360001 D9 1754 chr3L 22577598 22577643 chr3L 22582411 22582455 Doc 26 4813 12.0 11.0 11.5 2.1 4857 chr3L 22577598 intergenic not near genes chr3L 22580026 intergenic not near genes chr3L 22582455 3` UTR CG14459 - chr3L_26_22580001 chr3L_22580001 D9 1755 chr3L 22865965 22865999 chr3L 22867123 22867157 Doc 9 1158 6.5 3.0 4.8 1.6 1192 chr3L 22865965 intron CG33170 + chr3L 22866561 intron CG33170 + chr3L 22867157 intron CG33170 + chr3L_9_22865001 chr3L_22865001 D9 1756 chr3L 19220633 19220637 chr3L 22908066 22908067 318 3687432 31.5 25.0 28.2 10.9 3687434 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908067 intergenic not near genes chr3L_318_21060001 chr3L_21060001 D9 1757 chr3L 22989842 22989885 chr3L 22996841 22996884 297 19 6997 7.0 4.0 5.5 2.9 7042 chr3L 22989842 intergenic not near genes chr3L 22993363 intergenic not near genes chr3L 22996884 intergenic not near genes chr3L_19_22990001 chr3L_22990001 D9 1758 chr3L 24168763 24168822 chr3L 24176116 24176175 ZAM 43 7353 11.0 8.5 9.8 4.0 7412 chr3L 24168763 intron Snap25 + chr3L 24172469 intron Snap25 + chr3L 24176175 intron Snap25 + chr3L_43_24170001 chr3L_24170001 D9 1759 chr3L 24791876 24791912 chr3L 24796680 24796716 Doc 10 4804 4.5 1.5 3.0 2.5 4840 chr3L 24791876 intergenic not near genes chr3L 24794296 intergenic not near genes chr3L 24796716 intergenic not near genes chr3L_10_24790001 chr3L_24790001 D9 1760 chr3L 20525228 20525230 chr3L 24821493 24821493 10 4296264 22.0 12.5 17.2 0.5 4296265 chr3L 20525228 intron CG4825 - chr3L 22673360 intron CG14457 + chr3L 24821493 intergenic not near genes chr3L_10_22670001 chr3L_22670001 D9 1761 chr3L 27390434 27390712 chr3L 27390680 27390816 33 118 68.0 66.0 67.0 0.5 382 chr3L 27390434 intron Dbp80 + chr3L 27390625 intron Dbp80 + chr3L 27390816 intron Dbp80 + chr3L_33_27390001 chr3L_27390001 D9 1762 chr3R 98954 98955 chr3R 109521 109522 8 10567 9.0 0.0 4.5 1.5 10568 chr3R 98954 intergenic not near genes chr3R 104238 intergenic not near genes chr3R 109522 intergenic not near genes chr3R_8_100001 chr3R_100001 D9 1763 chr3R 1521167 1521184 chr3R 1521280 1521297 6 113 39.0 28.5 33.8 0.2 130 chr3R 1521167 intergenic not near genes chr3R 1521232 intergenic not near genes chr3R 1521297 intergenic not near genes chr3R_6_1520001 chr3R_1520001 D9 1764 chr3R 2534113 2534159 chr3R 2541705 2541753 21 7593 36.5 29.5 33.0 0.6 7640 chr3R 2534113 intergenic not near genes chr3R 2537933 intergenic not near genes chr3R 2541753 intergenic not near genes chr3R_21_2535001 chr3R_2535001 D9 1765 chr3R 3989297 3989307 chr3R 4068941 4068951 mdg1 5 79644 33.5 12.5 23.0 0.2 79654 chr3R 3989297 intergenic not near genes chr3R 4029124 intergenic not near genes chr3R 4068951 intergenic not near genes chr3R_5_4025001 chr3R_4025001 D9 1766 chr3R 4648450 4648504 chr3R 4648559 4648613 13 107 4.5 3.5 4.0 2.6 163 chr3R 4648450 3` UTR rpk + chr3R 4648532 3` UTR rpk + chr3R 4648613 3` UTR rpk + chr3R_13_4645001 chr3R_4645001 D9 1767 chr3R 4887461 4887504 chr3R 4894861 4894903 rover 19 7400 9.0 10.0 9.5 1.8 7442 chr3R 4887461 intergenic not near genes chr3R 4891182 intergenic not near genes chr3R 4894903 intergenic not near genes chr3R_19_4890001 chr3R_4890001 D9 1768 chr3R 5045821 5045875 chr3R 5052948 5053002 HMS-Beagle 10 7127 7.0 3.0 5.0 1.7 7181 chr3R 5045821 3` UTR CR43635 - chr3R 5049412 intergenic not near genes chr3R 5053002 intergenic CR45588 - chr3R_10_5045001 chr3R_5045001 D9 1769 chr3R 5726079 5726117 chr3R 5726266 5726304 5 186 1.5 4.5 3.0 1.2 225 chr3R 5726079 intergenic not near genes chr3R 5726192 intergenic not near genes chr3R 5726304 intergenic not near genes chr3R_5_5725001 chr3R_5725001 D9 1770 chr3R 5745989 5746044 chr3R 5746255 5746310 pogo 10 266 5.5 5.5 5.5 1.5 321 chr3R 5745989 3` UTR Madm + chr3R 5746150 3` UTR Madm + chr3R 5746310 3` UTR Madm + chr3R_10_5745001 chr3R_5745001 D9 1771 chr3R 5746998 5747032 chr3R 5753214 5753248 diver 7 6216 3.0 3.0 3.0 1.8 6250 chr3R 5746998 intergenic Madm + chr3R 5750123 intergenic not near genes chr3R 5753248 intergenic CG2091 - chr3R_7_5750001 chr3R_5750001 D9 1772 chr3R 5809104 5809142 chr3R 5809370 5809408 pogo 17 266 6.5 6.5 6.5 2.3 304 chr3R 5809104 3` UTR CG11000 + chr3R 5809256 3` UTR CG11000 + chr3R 5809408 3` UTR CG11000 + chr3R_17_5805001 chr3R_5805001 D9 1773 chr3R 5822362 5822402 chr3R 5823554 5823594 1360 13 1191 7.0 9.0 8.0 1.4 1232 chr3R 5822362 3` UTR CG2023 - chr3R 5822978 3` UTR CG2023 - chr3R 5823594 3` UTR CG2023 - chr3R_13_5820001 chr3R_5820001 D9 1774 chr3R 5893144 5893203 chr3R 5893341 5893400 18 197 2.5 2.5 2.5 5.1 256 chr3R 5893144 intron CG34113 - chr3R 5893272 intron CG34113 - chr3R 5893400 intron CG34113 - chr3R_18_5890001 chr3R_5890001 D9 1775 chr3R 5895936 5895982 chr3R 5896175 5896221 14 237 0.5 3.5 2.0 4.7 285 chr3R 5895936 intron CG34113 - chr3R 5896078 intron CG34113 - chr3R 5896221 intron CG34113 - chr3R_14_5895001 chr3R_5895001 D9 1776 chr3R 5896942 5896998 chr3R 5897326 5897382 8 384 1.5 1.0 1.2 3.6 440 chr3R 5896942 intron CG34113 - chr3R 5897162 intron CG34113 - chr3R 5897382 intron CG34113 - chr3R_8_5895001 chr3R_5895001 D9 1777 chr3R 5927539 5927579 chr3R 5927804 5927844 pogo 23 264 6.0 3.5 4.8 4.0 305 chr3R 5927539 intron CG34113 - chr3R 5927692 intron CG34113 - chr3R 5927844 intron CG34113 - chr3R_23_5925001 chr3R_5925001 D9 1778 chr3R 5931441 5931456 chr3R 5931554 5931569 8 113 4.5 14.0 9.2 0.8 128 chr3R 5931441 intron CG34113 - chr3R 5931505 intron CG34113 - chr3R 5931569 intron CG34113 - chr3R_8_5930001 chr3R_5930001 D9 1779 chr3R 5935341 5935392 chr3R 5935442 5935491 9 100 0.5 0.0 0.2 7.5 150 chr3R 5935341 intron CG34113 - chr3R 5935416 intron CG34113 - chr3R 5935491 intron CG34113 - chr3R_9_5935001 chr3R_5935001 D9 1780 chr3R 5943386 5943417 chr3R 5943488 5943521 9 104 0.5 0.0 0.2 7.5 135 chr3R 5943386 intron CG34113 - chr3R 5943454 intron CG34113 - chr3R 5943521 intron CG34113 - chr3R_9_5940001 chr3R_5940001 D9 1781 chr3R 5988879 5988926 chr3R 5989105 5989152 13 226 3.0 4.0 3.5 2.9 273 chr3R 5988879 intergenic CR44927 + chr3R 5989016 intergenic CR44927 + chr3R 5989152 intergenic CR44927 + chr3R_13_5985001 chr3R_5985001 D9 1782 chr3R 5991429 5991488 chr3R 5991537 5991594 23 107 4.0 5.0 4.5 4.2 165 chr3R 5991429 intergenic not near genes chr3R 5991512 intergenic not near genes chr3R 5991594 intergenic not near genes chr3R_23_5990001 chr3R_5990001 D9 1783 chr3R 5999443 5999499 chr3R 5999551 5999607 20 108 3.0 5.0 4.0 4.0 164 chr3R 5999443 intergenic not near genes chr3R 5999525 intergenic not near genes chr3R 5999607 intergenic not near genes chr3R_20_5995001 chr3R_5995001 D9 1784 chr3R 6015940 6015994 chr3R 6024444 6024500 Tirant 30 8506 3.5 8.5 6.0 4.3 8560 chr3R 6015940 intergenic not near genes chr3R 6020220 intergenic not near genes chr3R 6024500 intergenic not near genes chr3R_30_6020001 chr3R_6020001 D9 1785 chr3R 6048422 6048474 chr3R 6048530 6048582 14 108 5.5 3.5 4.5 2.5 160 chr3R 6048422 intergenic not near genes chr3R 6048502 intergenic not near genes chr3R 6048582 intergenic not near genes chr3R_14_6045001 chr3R_6045001 D9 1786 chr3R 6120997 6121053 chr3R 6121098 6121152 16 99 6.5 2.0 4.2 3.1 155 chr3R 6120997 intergenic not near genes chr3R 6121074 intergenic not near genes chr3R 6121152 intergenic not near genes chr3R_16_6120001 chr3R_6120001 D9 1787 chr3R 6158487 6158533 chr3R 6167095 6167141 Tirant 13 8608 8.5 4.0 6.2 1.8 8654 chr3R 6158487 intergenic not near genes chr3R 6162814 intergenic not near genes chr3R 6167141 intergenic CG1077 + chr3R_13_6160001 chr3R_6160001 D9 1788 chr3R 6175147 6175199 chr3R 6182444 6182496 HMS-Beagle2 9 7297 4.0 3.5 3.8 1.9 7349 chr3R 6175147 intergenic Osi1 + chr3R 6178822 intron CR45194 + chr3R 6182496 intergenic CR45194 + chr3R_9_6175001 chr3R_6175001 D9 1789 chr3R 6189701 6189749 chr3R 6189807 6189855 10 106 3.0 2.5 2.8 2.6 154 chr3R 6189701 intron NPFR + chr3R 6189778 intron NPFR + chr3R 6189855 intron NPFR + chr3R_10_6185001 chr3R_6185001 D9 1790 chr3R 6191144 6191200 chr3R 6191249 6191303 12 104 3.0 1.5 2.2 3.8 159 chr3R 6191144 intron NPFR + chr3R 6191224 intron NPFR + chr3R 6191303 intron NPFR + chr3R_12_6190001 chr3R_6190001 D9 1791 chr3R 6206264 6206316 chr3R 6206505 6206558 BS 19 242 6.5 7.0 6.8 2.4 294 chr3R 6206264 exon Osi24 + chr3R 6206411 intron Osi24 + chr3R 6206558 intron Osi24 + chr3R_19_6205001 chr3R_6205001 D9 1792 chr3R 6302561 6302616 chr3R 6302665 6302720 14 103 5.0 4.0 4.5 2.5 159 chr3R 6302561 intron Osi15 + chr3R 6302640 intron Osi15 + chr3R 6302720 intron Osi15 + chr3R_14_6300001 chr3R_6300001 D9 1793 chr3R 6461554 6461611 chr3R 6461660 6461716 11 105 0.0 2.5 1.2 5.0 162 chr3R 6461554 intergenic not near genes chr3R 6461635 intergenic not near genes chr3R 6461716 intergenic not near genes chr3R_11_6460001 chr3R_6460001 D9 1794 chr3R 6510011 6510050 chr3R 6515117 6515156 jockey 7 5106 3.0 1.5 2.2 2.2 5145 chr3R 6510011 intergenic not near genes chr3R 6512584 intergenic not near genes chr3R 6515156 intergenic not near genes chr3R_7_6510001 chr3R_6510001 D9 1795 chr3R 6523302 6523342 chr3R 6523703 6523743 6 401 4.0 6.5 5.2 1.0 441 chr3R 6523302 intergenic not near genes chr3R 6523522 intergenic not near genes chr3R 6523743 intergenic not near genes chr3R_6_6520001 chr3R_6520001 D9 1796 chr3R 6526846 6526869 chr3R 6526974 6526997 6 128 2.0 2.0 2.0 2.0 151 chr3R 6526846 intergenic not near genes chr3R 6526922 intergenic not near genes chr3R 6526997 intergenic not near genes chr3R_6_6525001 chr3R_6525001 D9 1797 chr3R 6717662 6717707 chr3R 6717825 6717869 7 158 1.0 5.0 3.0 1.8 207 chr3R 6717662 intron pb - chr3R 6717766 intron pb - chr3R 6717869 intron pb - chr3R_7_6715001 chr3R_6715001 D9 1798 chr3R 6737479 6737524 chr3R 6739290 6739336 Doc 14 1811 4.0 7.5 5.8 2.1 1857 chr3R 6737479 intron pb - chr3R 6738408 intron pb - chr3R 6739336 intron pb - chr3R_14_6735001 chr3R_6735001 D9 1799 chr3R 6803737 6803751 chr3R 6803835 6803852 7 100 0.0 4.5 2.2 2.2 115 chr3R 6803737 intergenic not near genes chr3R 6803794 intergenic not near genes chr3R 6803852 intergenic not near genes chr3R_7_6800001 chr3R_6800001 D9 1800 chr3R 6856364 6856398 chr3R 6856506 6856540 6 142 2.5 2.5 2.5 1.7 176 chr3R 6856364 intergenic not near genes chr3R 6856452 intergenic not near genes chr3R 6856540 intergenic not near genes chr3R_6_6855001 chr3R_6855001 D9 1801 chr3R 6862214 6862244 chr3R 6862326 6862353 7 111 3.5 3.5 3.5 1.6 139 chr3R 6862214 intergenic not near genes chr3R 6862284 intergenic not near genes chr3R 6862353 intergenic not near genes chr3R_7_6860001 chr3R_6860001 D9 1802 chr3R 6891212 6891218 chr3R 6891313 6891319 6 101 6.0 3.5 4.8 1.0 107 chr3R 6891212 intergenic not near genes chr3R 6891266 intergenic not near genes chr3R 6891319 intergenic not near genes chr3R_6_6890001 chr3R_6890001 D9 1803 chr3R 6891219 6891270 chr3R 6891312 6891371 19 99 5.0 3.0 4.0 3.8 152 chr3R 6891219 intergenic not near genes chr3R 6891295 intergenic not near genes chr3R 6891371 intergenic not near genes chr3R_19_6890001 chr3R_6890001 D9 1804 chr3R 6918037 6918092 chr3R 6918140 6918193 17 103 4.0 6.5 5.2 2.7 156 chr3R 6918037 intron Antp - chr3R 6918115 intron Antp - chr3R 6918193 intron Antp - chr3R_17_6915001 chr3R_6915001 D9 1805 chr3R 6972341 6972381 chr3R 6972443 6972481 8 101 2.0 4.0 3.0 2.0 140 chr3R 6972341 intron Antp - chr3R 6972411 intron Antp - chr3R 6972481 intron Antp - chr3R_8_6970001 chr3R_6970001 D9 1806 chr3R 6978864 6978915 chr3R 6978972 6979024 8 110 3.5 4.0 3.8 1.7 160 chr3R 6978864 intron Antp - chr3R 6978944 intron Antp - chr3R 6979024 intron Antp - chr3R_8_6975001 chr3R_6975001 D9 1807 chr3R 6987388 6987426 chr3R 6987496 6987534 11 108 3.5 4.5 4.0 2.2 146 chr3R 6987388 intron Antp - chr3R 6987461 intron Antp - chr3R 6987534 intron Antp - chr3R_11_6985001 chr3R_6985001 D9 1808 chr3R 7015971 7015988 chr3R 7016073 7016085 7 100 3.0 0.0 1.5 2.8 114 chr3R 7015971 intergenic not near genes chr3R 7016028 intergenic not near genes chr3R 7016085 intergenic not near genes chr3R_7_7015001 chr3R_7015001 D9 1809 chr3R 7068485 7068524 chr3R 7068635 7068674 7 150 3.5 3.0 3.2 1.7 189 chr3R 7068485 intron CG1965 + chr3R 7068580 intron CG1965 + chr3R 7068674 intron CG1965 + chr3R_7_7065001 chr3R_7065001 D9 1810 chr3R 7103261 7103313 chr3R 7103362 7103414 20 101 3.0 7.5 5.2 3.2 153 chr3R 7103261 intron Alh - chr3R 7103338 intron Alh - chr3R 7103414 intron Alh - chr3R_20_7100001 chr3R_7100001 D9 1811 chr3R 7126478 7126533 chr3R 7126598 7126651 11 120 3.5 0.0 1.8 3.9 173 chr3R 7126478 3` UTR,3` UTR CG10098 +,CG10068 - chr3R 7126564 3` UTR CG10068 - chr3R 7126651 3` UTR CG10068 - chr3R_11_7125001 chr3R_7125001 D9 1812 chr3R 7173663 7173692 chr3R 7173768 7173797 4 103 2.0 1.5 1.8 1.4 134 chr3R 7173663 intron sas + chr3R 7173730 intron sas + chr3R 7173797 intron sas + chr3R_4_7170001 chr3R_7170001 D9 1813 chr3R 7205970 7206011 chr3R 7206083 7206124 14 113 4.5 4.0 4.2 2.7 154 chr3R 7205970 intergenic not near genes chr3R 7206047 intergenic not near genes chr3R 7206124 intergenic not near genes chr3R_14_7205001 chr3R_7205001 D9 1814 chr3R 7447967 7448012 chr3R 7448070 7448115 9 103 1.5 1.5 1.5 3.6 148 chr3R 7447967 intergenic not near genes chr3R 7448041 intergenic not near genes chr3R 7448115 intergenic not near genes chr3R_9_7445001 chr3R_7445001 D9 1815 chr3R 7542456 7542467 chr3R 7542558 7542569 4 102 2.0 0.5 1.2 1.8 113 chr3R 7542456 intron alpha-Est2 + chr3R 7542512 intron alpha-Est2 + chr3R 7542569 intron alpha-Est2 + chr3R_4_7540001 chr3R_7540001 D9 1816 chr3R 7548580 7548632 chr3R 7548684 7548736 9 103 2.0 0.5 1.2 4.1 156 chr3R 7548580 intron alpha-Est1 - chr3R 7548658 intron alpha-Est1 - chr3R 7548736 intron alpha-Est1 - chr3R_9_7545001 chr3R_7545001 D9 1817 chr3R 7598940 7598960 chr3R 7599040 7599061 8 100 6.5 8.5 7.5 0.9 121 chr3R 7598940 intron CG34127 - chr3R 7599000 intron CG34127 - chr3R 7599061 intron CG34127 - chr3R_8_7595001 chr3R_7595001 D9 1818 chr3R 7617974 7618021 chr3R 7618089 7618138 16 116 3.0 6.5 4.8 2.8 164 chr3R 7617974 intron CG34127 - chr3R 7618056 intron CG34127 - chr3R 7618138 intron CG34127 - chr3R_16_7615001 chr3R_7615001 D9 1819 chr3R 7621528 7621560 chr3R 7621641 7621675 7 114 3.5 5.0 4.2 1.3 147 chr3R 7621528 intron CG34127 - chr3R 7621602 intron CG34127 - chr3R 7621675 intron CG34127 - chr3R_7_7620001 chr3R_7620001 D9 1820 chr3R 7653801 7653838 chr3R 7653910 7653946 11 109 6.0 5.5 5.8 1.6 145 chr3R 7653801 intergenic not near genes chr3R 7653874 intergenic not near genes chr3R 7653946 intergenic not near genes chr3R_11_7650001 chr3R_7650001 D9 1821 chr3R 7677899 7677944 chr3R 7678037 7678075 5 137 2.0 5.5 3.8 1.0 176 chr3R 7677899 intron Nlg1 + chr3R 7677987 intron Nlg1 + chr3R 7678075 intron Nlg1 + chr3R_5_7675001 chr3R_7675001 D9 1822 chr3R 7686792 7686837 chr3R 7686898 7686943 12 105 10.0 3.5 6.8 1.5 151 chr3R 7686792 intron Nlg1 + chr3R 7686868 intron Nlg1 + chr3R 7686943 intron Nlg1 + chr3R_12_7685001 chr3R_7685001 D9 1823 chr3R 7687773 7687827 chr3R 7687882 7687936 15 108 4.5 0.0 2.2 4.7 163 chr3R 7687773 intron Nlg1 + chr3R 7687854 intron Nlg1 + chr3R 7687936 intron Nlg1 + chr3R_15_7685001 chr3R_7685001 D9 1824 chr3R 7690030 7690059 chr3R 7690146 7690175 12 116 8.0 4.0 6.0 1.7 145 chr3R 7690030 intron Nlg1 + chr3R 7690102 intron Nlg1 + chr3R 7690175 intron Nlg1 + chr3R_12_7690001 chr3R_7690001 D9 1825 chr3R 7694561 7694593 chr3R 7713647 7713677 invader3 8 19086 4.5 1.0 2.8 2.1 19116 chr3R 7694561 3` UTR Nlg1 + chr3R 7704119 intergenic not near genes chr3R 7713677 intergenic not near genes chr3R_8_7700001 chr3R_7700001 D9 1826 chr3R 7729445 7729496 chr3R 7737407 7737459 Stalker2 8 7963 6.0 5.5 5.8 1.2 8014 chr3R 7729445 intergenic not near genes chr3R 7733452 intergenic not near genes chr3R 7737459 intergenic not near genes chr3R_8_7730001 chr3R_7730001 D9 1827 chr3R 7849618 7849671 chr3R 7850810 7850863 1360 5 1192 1.0 1.0 1.0 2.5 1245 chr3R 7849618 intron CG34384 + chr3R 7850240 intron CG34384 + chr3R 7850863 intron CG34384 + chr3R_5_7850001 chr3R_7850001 D9 1828 chr3R 7857631 7857667 chr3R 7857739 7857775 7 108 4.0 4.0 4.0 1.4 144 chr3R 7857631 3` UTR CG17816 - chr3R 7857703 3` UTR CG17816 - chr3R 7857775 3` UTR CG17816 - chr3R_7_7855001 chr3R_7855001 D9 1829 chr3R 7944035 7944080 chr3R 7944230 7944277 14 196 4.0 4.0 4.0 2.8 242 chr3R 7944035 intron dsx - chr3R 7944156 intron dsx - chr3R 7944277 intron dsx - chr3R_14_7940001 chr3R_7940001 D9 1830 chr3R 7955909 7955967 chr3R 7956011 7956038 15 100 3.0 7.5 5.2 2.4 129 chr3R 7955909 intron dsx - chr3R 7955974 intron dsx - chr3R 7956038 intron dsx - chr3R_15_7955001 chr3R_7955001 D9 1831 chr3R 7965294 7965336 chr3R 7965407 7965449 14 113 2.5 3.0 2.8 3.7 155 chr3R 7965294 intron dsx - chr3R 7965372 intron dsx - chr3R 7965449 intron dsx - chr3R_14_7965001 chr3R_7965001 D9 1832 chr3R 7973325 7973348 chr3R 7974414 7974437 1360 7 1089 3.0 6.0 4.5 1.3 1112 chr3R 7973325 intergenic not near genes chr3R 7973881 intergenic not near genes chr3R 7974437 3` UTR CD98hc - chr3R_7_7970001 chr3R_7970001 D9 1833 chr3R 7993188 7993217 chr3R 7993311 7993340 5 123 1.5 4.0 2.8 1.3 152 chr3R 7993188 intron CG2781 - chr3R 7993264 intron CG2781 - chr3R 7993340 intron CG2781 - chr3R_5_7990001 chr3R_7990001 D9 1834 chr3R 8049028 8049064 chr3R 8049627 8049663 9 599 5.0 2.5 3.8 1.9 635 chr3R 8049028 intron CG43060 + chr3R 8049346 intron,intron CG43060 +,CG43618 + chr3R 8049663 intron CG43060 + chr3R_9_8045001 chr3R_8045001 D9 1835 chr3R 8070885 8070924 chr3R 8070991 8071030 18 106 7.5 7.0 7.2 2.2 145 chr3R 8070885 intron mAChR-B + chr3R 8070958 intron mAChR-B + chr3R 8071030 intron mAChR-B + chr3R_18_8070001 chr3R_8070001 D9 1836 chr3R 8090245 8090293 chr3R 8090447 8090495 12 202 4.5 4.0 4.2 2.3 250 chr3R 8090245 5` UTR CR44330 + chr3R 8090370 intergenic CR44330 + chr3R 8090495 intergenic CR44330 + chr3R_12_8090001 chr3R_8090001 D9 1837 chr3R 8090545 8090566 chr3R 8094047 8094068 297 9 3502 5.0 14.5 9.8 0.8 3523 chr3R 8090545 intergenic CR44330 + chr3R 8092306 intergenic not near genes chr3R 8094068 intergenic CG7900 + chr3R_9_8090001 chr3R_8090001 D9 1838 chr3R 8094390 8094434 chr3R 8099720 8099764 Transpac 18 5330 4.5 3.5 4.0 3.6 5374 chr3R 8094390 intron CG7900 + chr3R 8097077 intron CG7900 + chr3R 8099764 intron CG7900 + chr3R_18_8095001 chr3R_8095001 D9 1839 chr3R 8101737 8101788 chr3R 8104846 8104897 G2 22 3109 7.0 7.5 7.2 2.7 3160 chr3R 8101737 exon CG7900 + chr3R 8103317 intron CG7900 + chr3R 8104897 3` UTR CG7900 + chr3R_22_8100001 chr3R_8100001 D9 1840 chr3R 8107363 8107418 chr3R 8107522 8107576 9 158 5.0 0.5 2.8 2.4 213 chr3R 8107363 intron puc + chr3R 8107470 intron puc + chr3R 8107576 intron puc + chr3R_9_8105001 chr3R_8105001 D9 1841 chr3R 8207539 8207583 chr3R 8208409 8208453 F-element 16 870 4.0 5.0 4.5 2.9 914 chr3R 8207539 intergenic not near genes chr3R 8207996 intergenic not near genes chr3R 8208453 intergenic not near genes chr3R_16_8205001 chr3R_8205001 D9 1842 chr3R 8293615 8293659 chr3R 8293720 8293764 7 105 5.0 0.0 2.5 2.0 149 chr3R 8293615 intergenic CG31463 +,CG9626 - chr3R 8293690 intergenic CG31463 +,CG9626 - chr3R 8293764 intergenic CG9626 -,CG31463 + chr3R_7_8290001 chr3R_8290001 D9 1843 chr3R 8293974 8294016 chr3R 8294177 8294219 10 202 6.0 7.0 6.5 1.3 245 chr3R 8293974 3` UTR CG9626 - chr3R 8294096 3` UTR CG9626 - chr3R 8294219 exon CG9626 - chr3R_10_8290001 chr3R_8290001 D9 1844 chr3R 8339241 8339247 chr3R 21907534 21907536 60 13568289 19.0 26.0 22.5 2.6 13568295 chr3R 8339241 intergenic not near genes chr3R 15123388 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_60_15120001 chr3R_15120001 D9 1845 chr3R 8402983 8403035 chr3R 8412174 8412226 roo 31 9190 7.5 6.5 7.0 3.9 9243 chr3R 8402983 intron CG45263 - chr3R 8407604 intron CG45263 - chr3R 8412226 intron CG45263 - chr3R_31_8405001 chr3R_8405001 D9 1846 chr3R 8426171 8426223 chr3R 8426281 8426332 24 109 9.0 8.5 8.8 2.4 161 chr3R 8426171 intron CG45263 - chr3R 8426252 intron CG45263 - chr3R 8426332 intron CG45263 - chr3R_24_8425001 chr3R_8425001 D9 1847 chr3R 8478055 8478108 chr3R 8478159 8478213 20 104 1.0 4.0 2.5 5.7 158 chr3R 8478055 intergenic CG45263 - chr3R 8478134 intergenic not near genes chr3R 8478213 intergenic not near genes chr3R_20_8475001 chr3R_8475001 D9 1848 chr3R 8570461 8570491 chr3R 8575114 8575152 HMS-Beagle 8 4660 2.0 3.5 2.8 2.1 4691 chr3R 8570461 intergenic not near genes chr3R 8572806 intergenic not near genes chr3R 8575152 intergenic not near genes chr3R_8_8570001 chr3R_8570001 D9 1849 chr3R 8576137 8576188 chr3R 8576333 8576384 12 196 4.0 2.0 3.0 3.0 247 chr3R 8576137 intergenic not near genes chr3R 8576260 intergenic not near genes chr3R 8576384 intergenic not near genes chr3R_12_8575001 chr3R_8575001 D9 1850 chr3R 8601747 8601796 chr3R 8610925 8610974 roo 13 9177 5.0 2.0 3.5 2.9 9227 chr3R 8601747 intron 5-HT2B + chr3R 8606360 intron 5-HT2B + chr3R 8610974 intron 5-HT2B + chr3R_13_8605001 chr3R_8605001 D9 1851 chr3R 8631487 8631542 chr3R 8631616 8631671 18 129 3.0 2.0 2.5 5.1 184 chr3R 8631487 intergenic not near genes chr3R 8631579 intergenic not near genes chr3R 8631671 intergenic not near genes chr3R_18_8630001 chr3R_8630001 D9 1852 chr3R 8707331 8707380 chr3R 8709797 8709846 jockey 18 2466 0.5 8.0 4.2 3.5 2515 chr3R 8707331 intergenic not near genes chr3R 8708588 intergenic not near genes chr3R 8709846 intergenic not near genes chr3R_18_8705001 chr3R_8705001 D9 1853 chr3R 8894892 8894895 chr3R 8896035 8896038 1360 4 1143 4.0 5.0 4.5 0.7 1146 chr3R 8894892 intron pyd - chr3R 8895465 intron pyd - chr3R 8896038 intron pyd - chr3R_4_8895001 chr3R_8895001 D9 1854 chr3R 8898198 8898211 chr3R 8913803 8913816 297 8 15606 16.5 9.0 12.8 0.6 15618 chr3R 8898198 intron pyd - chr3R 8906007 intron pyd - chr3R 8913816 intron pyd - chr3R_8_8905001 chr3R_8905001 D9 1855 chr3R 8917863 8917908 chr3R 8917968 8918013 11 104 1.0 2.0 1.5 4.4 150 chr3R 8917863 intron pyd - chr3R 8917938 intron pyd - chr3R 8918013 intron pyd - chr3R_11_8915001 chr3R_8915001 D9 1856 chr3R 8974616 8974657 chr3R 8974722 8974763 4 106 1.5 4.0 2.8 1.1 147 chr3R 8974616 intergenic not near genes chr3R 8974690 intergenic not near genes chr3R 8974763 intergenic not near genes chr3R_4_8970001 chr3R_8970001 D9 1857 chr3R 9036686 9036735 chr3R 9036807 9036856 10 121 1.5 3.5 2.5 2.9 170 chr3R 9036686 intron neur - chr3R 9036771 intron neur - chr3R 9036856 intron neur - chr3R_10_9035001 chr3R_9035001 D9 1858 chr3R 9066178 9066220 chr3R 9066279 9066321 14 101 3.5 3.0 3.2 3.3 143 chr3R 9066178 exon Ada + chr3R 9066250 exon Ada + chr3R 9066321 intergenic Ada +,pum - chr3R_14_9065001 chr3R_9065001 D9 1859 chr3R 9101823 9101864 chr3R 9101946 9101987 9 123 1.0 4.5 2.8 2.4 164 chr3R 9101823 intron pum - chr3R 9101905 intron pum - chr3R 9101987 intron pum - chr3R_9_9100001 chr3R_9100001 D9 1860 chr3R 9108845 9108875 chr3R 9108946 9108975 10 101 2.5 3.5 3.0 2.5 130 chr3R 9108845 intron pum - chr3R 9108910 intron pum - chr3R 9108975 intron pum - chr3R_10_9105001 chr3R_9105001 D9 1861 chr3R 9141119 9141166 chr3R 9141225 9141275 7 108 3.5 1.0 2.2 2.2 156 chr3R 9141119 intron pum - chr3R 9141197 intron pum - chr3R 9141275 intron pum - chr3R_7_9140001 chr3R_9140001 D9 1862 chr3R 9143015 9143053 chr3R 9143181 9143219 12 166 2.0 4.5 3.2 2.9 204 chr3R 9143015 intron pum - chr3R 9143117 intron pum - chr3R 9143219 intron pum - chr3R_12_9140001 chr3R_9140001 D9 1863 chr3R 9195339 9195379 chr3R 9195464 9195504 4 124 1.5 2.0 1.8 1.4 165 chr3R 9195339 intron pum - chr3R 9195422 intron pum - chr3R 9195504 intron pum - chr3R_4_9195001 chr3R_9195001 D9 1864 chr3R 9211188 9211216 chr3R 9211430 9211460 10 243 1.5 3.0 2.2 3.1 272 chr3R 9211188 intron pum - chr3R 9211324 intron pum - chr3R 9211460 intron pum - chr3R_10_9210001 chr3R_9210001 D9 1865 chr3R 9214774 9214817 chr3R 9214914 9214957 13 138 4.5 3.0 3.8 2.7 183 chr3R 9214774 intron pum - chr3R 9214866 intron pum - chr3R 9214957 intron pum - chr3R_13_9210001 chr3R_9210001 D9 1866 chr3R 9278771 9278805 chr3R 9284056 9284090 Rt1a 11 5285 6.0 8.5 7.2 1.3 5319 chr3R 9278771 intergenic not near genes chr3R 9281430 intergenic not near genes chr3R 9284090 intergenic not near genes chr3R_11_9280001 chr3R_9280001 D9 1867 chr3R 9319563 9319598 chr3R 9320023 9320058 jockey 9 460 6.0 4.5 5.2 1.5 495 chr3R 9319563 intron CG8861 - chr3R 9319810 intron CG8861 - chr3R 9320058 intron CG8861 - chr3R_9_9315001 chr3R_9315001 D9 1868 chr3R 9361819 9361845 chr3R 9362085 9362110 pogo 6 266 2.0 3.5 2.8 1.6 291 chr3R 9361819 3` UTR CG45050 + chr3R 9361964 3` UTR CG45050 + chr3R 9362110 3` UTR CG45050 + chr3R_6_9360001 chr3R_9360001 D9 1869 chr3R 9379155 9379172 chr3R 9379262 9379279 5 106 0.0 7.5 3.8 1.0 124 chr3R 9379155 intron FER - chr3R 9379217 intron FER - chr3R 9379279 intron FER - chr3R_5_9375001 chr3R_9375001 D9 1870 chr3R 9382790 9382841 chr3R 9382940 9382991 11 150 6.0 1.0 3.5 2.4 201 chr3R 9382790 intron FER - chr3R 9382890 intron FER - chr3R 9382991 intron FER - chr3R_11_9380001 chr3R_9380001 D9 1871 chr3R 9434689 9434711 chr3R 9434801 9434823 5 112 3.0 5.0 4.0 1.0 134 chr3R 9434689 intron ps + chr3R 9434756 intron ps + chr3R 9434823 intron ps + chr3R_5_9430001 chr3R_9430001 D9 1872 chr3R 9582288 9582313 chr3R 9582386 9582391 5 100 3.5 1.5 2.5 1.4 103 chr3R 9582288 intron CG8301 + chr3R 9582340 intron CG8301 + chr3R 9582391 intron CG8301 + chr3R_5_9580001 chr3R_9580001 D9 1873 chr3R 9611854 9611886 chr3R 9611961 9611993 8 107 3.0 0.0 1.5 3.2 139 chr3R 9611854 intron CG8312 + chr3R 9611924 intron CG8312 + chr3R 9611993 intron CG8312 + chr3R_8_9610001 chr3R_9610001 D9 1874 chr3R 9620956 9620956 chr3R 21907534 21907536 22 12286579 17.0 26.0 21.5 1.0 12286580 chr3R 9620956 intron CG8312 + chr3R 15764246 intergenic not near genes chr3R 21907536 intergenic CG6678 + chr3R_22_15760001 chr3R_15760001 D9 1875 chr3R 9699958 9699998 chr3R 9700072 9700112 1360 12 114 7.5 5.0 6.2 1.7 154 chr3R 9699958 intron Unc-115a - chr3R 9700035 intron Unc-115a - chr3R 9700112 intron Unc-115a - chr3R_12_9700001 chr3R_9700001 D9 1876 chr3R 9829383 9829428 chr3R 9829490 9829538 16 110 1.5 2.0 1.8 5.7 155 chr3R 9829383 intron Teh1 - chr3R 9829460 intron Teh1 - chr3R 9829538 intron Teh1 - chr3R_16_9825001 chr3R_9825001 D9 1877 chr3R 9997401 9997456 chr3R 9997509 9997567 24 102 6.5 4.0 5.2 3.9 166 chr3R 9997401 5` UTR Spn85F + chr3R 9997484 5` UTR Spn85F + chr3R 9997567 exon Spn85F + chr3R_24_9995001 chr3R_9995001 D9 1878 chr3R 10062238 10062270 chr3R 10062386 10062418 4 148 2.0 4.5 3.2 1.0 180 chr3R 10062238 intergenic CR45205 -,CG33630 + chr3R 10062328 intergenic CG33630 +,CR45205 - chr3R 10062418 intergenic CG33630 +,CR45205 - chr3R_4_10060001 chr3R_10060001 D9 1879 chr3R 10073754 10073797 chr3R 10073888 10073929 11 134 4.0 2.5 3.2 2.6 175 chr3R 10073754 3` UTR nerfin-2 + chr3R 10073842 3` UTR CG5361 - chr3R 10073929 exon CG5361 - chr3R_11_10070001 chr3R_10070001 D9 1880 chr3R 10228108 10228153 chr3R 10228209 10228253 10 100 2.5 1.0 1.8 3.6 145 chr3R 10228108 intron CG42795 + chr3R 10228180 intron CG42795 + chr3R 10228253 intron CG42795 + chr3R_10_10225001 chr3R_10225001 D9 1881 chr3R 10231763 10231804 chr3R 10237365 10237406 mdg3 9 5600 2.5 2.5 2.5 2.6 5643 chr3R 10231763 intron CG42795 + chr3R 10234584 intron CG42795 + chr3R 10237406 intron CG42795 + chr3R_9_10230001 chr3R_10230001 D9 1882 chr3R 10255358 10255382 chr3R 10260823 10260847 I-element 4 5465 4.5 6.5 5.5 0.6 5489 chr3R 10255358 3` UTR Sirt6 - chr3R 10258102 intron Sirt6 - chr3R 10260847 exon Sirt6 - chr3R_4_10255001 chr3R_10255001 D9 1883 chr3R 10403008 10403063 chr3R 10403113 10403167 13 106 1.5 1.0 1.2 5.9 159 chr3R 10403008 3` UTR CG6325 - chr3R 10403088 3` UTR CG6325 - chr3R 10403167 3` UTR CG6325 - chr3R_13_10400001 chr3R_10400001 D9 1884 chr3R 6090420 6090420 chr3R 10451877 10451877 5 4361457 16.0 20.0 18.0 0.3 4361457 chr3R 6090420 intron Gasp - chr3R 8271148 intergenic not near genes chr3R 10451877 intergenic not near genes chr3R_5_8270001 chr3R_8270001 D9 1885 chr3R 10531847 10531895 chr3R 10531953 10532001 8 105 2.5 0.0 1.2 3.6 154 chr3R 10531847 intron hth - chr3R 10531924 intron hth - chr3R 10532001 intron hth - chr3R_8_10530001 chr3R_10530001 D9 1886 chr3R 10535311 10535337 chr3R 10535429 10535455 6 118 5.5 1.0 3.2 1.4 144 chr3R 10535311 intron hth - chr3R 10535383 intron hth - chr3R 10535455 intron hth - chr3R_6_10535001 chr3R_10535001 D9 1887 chr3R 10686317 10686337 chr3R 10686423 10686443 10 106 10.0 5.0 7.5 1.2 126 chr3R 10686317 intergenic not near genes chr3R 10686380 intergenic not near genes chr3R 10686443 intergenic Skeletor + chr3R_10_10685001 chr3R_10685001 D9 1888 chr3R 10724927 10724980 chr3R 10725030 10725083 18 103 2.5 4.0 3.2 4.3 156 chr3R 10724927 intergenic not near genes chr3R 10725005 intergenic not near genes chr3R 10725083 intergenic not near genes chr3R_18_10725001 chr3R_10725001 D9 1889 chr3R 10727624 10727679 chr3R 10727729 10727784 25 105 5.5 4.5 5.0 4.2 160 chr3R 10727624 intergenic not near genes chr3R 10727704 intergenic not near genes chr3R 10727784 intergenic not near genes chr3R_25_10725001 chr3R_10725001 D9 1890 chr3R 10730966 10731026 chr3R 10731157 10731217 15 191 2.5 3.0 2.8 3.9 251 chr3R 10730966 intergenic not near genes chr3R 10731092 intergenic not near genes chr3R 10731217 intergenic not near genes chr3R_15_10730001 chr3R_10730001 D9 1891 chr3R 10804151 10804190 chr3R 10811708 10811747 17.6 9 7557 3.0 2.0 2.5 2.6 7596 chr3R 10804151 intergenic CG14692 - chr3R 10807949 intergenic not near genes chr3R 10811747 3` UTR CG14693 - chr3R_9_10805001 chr3R_10805001 D9 1892 chr3R 10830892 10830936 chr3R 10831000 10831063 8 124 8.5 0.0 4.2 1.5 171 chr3R 10830892 intron Cad86C + chr3R 10830978 intron Cad86C + chr3R 10831063 intron Cad86C + chr3R_8_10830001 chr3R_10830001 D9 1893 chr3R 10954107 10954160 chr3R 10954222 10954270 17 111 11.0 3.5 7.2 2.1 163 chr3R 10954107 intergenic not near genes chr3R 10954188 intergenic not near genes chr3R 10954270 intergenic not near genes chr3R_17_10950001 chr3R_10950001 D9 1894 chr3R 10957861 10957885 chr3R 10963263 10963287 Rt1c 14 5400 12.5 6.5 9.5 1.3 5426 chr3R 10957861 intergenic not near genes chr3R 10960574 intergenic not near genes chr3R 10963287 intergenic not near genes chr3R_14_10960001 chr3R_10960001 D9 1895 chr3R 10963546 10963583 chr3R 10963665 10963702 11 119 5.0 4.5 4.8 1.9 156 chr3R 10963546 intergenic not near genes chr3R 10963624 intergenic not near genes chr3R 10963702 intergenic not near genes chr3R_11_10960001 chr3R_10960001 D9 1896 chr3R 11065578 11065596 chr3R 11071253 11071273 297 4 5674 2.5 2.5 2.5 1.1 5695 chr3R 11065578 intergenic not near genes chr3R 11068426 intergenic not near genes chr3R 11071273 intergenic not near genes chr3R_4_11065001 chr3R_11065001 D9 1897 chr3R 11099632 11099686 chr3R 11099789 11099842 17 156 2.5 2.5 2.5 4.9 210 chr3R 11099632 intergenic not near genes chr3R 11099737 intergenic not near genes chr3R 11099842 intergenic not near genes chr3R_17_11095001 chr3R_11095001 D9 1898 chr3R 11102302 11102340 chr3R 11102405 11102446 12 106 9.5 6.0 7.8 1.4 144 chr3R 11102302 intergenic not near genes chr3R 11102374 intergenic not near genes chr3R 11102446 intergenic not near genes chr3R_12_11100001 chr3R_11100001 D9 1899 chr3R 11103150 11103161 chr3R 11103257 11103267 6 106 0.5 0.0 0.2 5.0 117 chr3R 11103150 intergenic not near genes chr3R 11103208 intergenic not near genes chr3R 11103267 intergenic not near genes chr3R_6_11100001 chr3R_11100001 D9 1900 chr3R 11104251 11104275 chr3R 11104353 11104379 7 104 7.5 0.5 4.0 1.4 128 chr3R 11104251 intergenic not near genes chr3R 11104315 intergenic not near genes chr3R 11104379 intergenic not near genes chr3R_7_11100001 chr3R_11100001 D9 1901 chr3R 11151670 11151702 chr3R 11156538 11156570 5 4868 20.5 13.5 17.0 0.3 4900 chr3R 11151670 3` UTR Ugt86Di - chr3R 11154120 intergenic Ugt86Di - chr3R 11156570 intergenic Ugt86Dc + chr3R_5_11150001 chr3R_11150001 D9 1902 chr3R 11174568 11174614 chr3R 11175307 11175353 8 739 32.0 31.0 31.5 0.2 785 chr3R 11174568 exon Ugt86Dj - chr3R 11174960 intron Ugt86Dj - chr3R 11175353 exon Ugt86Dj - chr3R_8_11170001 chr3R_11170001 D9 1903 chr3R 11197959 11198009 chr3R 11198083 11198133 13 124 2.0 4.5 3.2 3.1 174 chr3R 11197959 intron cu + chr3R 11198046 intron cu + chr3R 11198133 intron cu + chr3R_13_11195001 chr3R_11195001 D9 1904 chr3R 11259671 11259715 chr3R 11259788 11259832 12 116 1.5 4.0 2.8 3.2 161 chr3R 11259671 intergenic not near genes chr3R 11259752 intergenic not near genes chr3R 11259832 intergenic not near genes chr3R_12_11255001 chr3R_11255001 D9 1905 chr3R 11263479 11263529 chr3R 11263587 11263637 18 108 4.5 6.5 5.5 2.8 158 chr3R 11263479 intergenic not near genes chr3R 11263558 intergenic not near genes chr3R 11263637 intergenic not near genes chr3R_18_11260001 chr3R_11260001 D9 1906 chr3R 11265906 11265922 chr3R 11266015 11266031 16 108 10.5 15.5 13.0 1.1 125 chr3R 11265906 intergenic not near genes chr3R 11265968 intergenic not near genes chr3R 11266031 intergenic not near genes chr3R_16_11265001 chr3R_11265001 D9 1907 chr3R 11379223 11379254 chr3R 11388401 11388432 roo 8 9179 6.5 9.5 8.0 0.9 9209 chr3R 11379223 intron pros + chr3R 11383828 intron pros + chr3R 11388432 intron pros + chr3R_8_11380001 chr3R_11380001 D9 1908 chr3R 11442329 11442369 chr3R 11442539 11442579 10 209 1.5 4.0 2.8 2.6 250 chr3R 11442329 intron,intron sals -,CG17230 + chr3R 11442454 intron,intron sals -,CG17230 + chr3R 11442579 intron,intron sals -,CG17230 + chr3R_10_11440001 chr3R_11440001 D9 1909 chr3R 11476351 11476397 chr3R 11476464 11476510 30 112 8.5 4.5 6.5 4.0 159 chr3R 11476351 intergenic not near genes chr3R 11476430 intergenic not near genes chr3R 11476510 intergenic not near genes chr3R_30_11475001 chr3R_11475001 D9 1910 chr3R 11545874 11545901 chr3R 11546016 11546043 4 142 1.5 3.0 2.2 1.2 169 chr3R 11545874 intergenic not near genes chr3R 11545958 intergenic not near genes chr3R 11546043 intergenic not near genes chr3R_4_11545001 chr3R_11545001 D9 1911 chr3R 11694703 11694741 chr3R 11694821 11694859 6 118 1.5 0.0 0.8 3.3 156 chr3R 11694703 intergenic Fer3 - chr3R 11694781 intergenic Fer3 - chr3R 11694859 intergenic not near genes chr3R_6_11690001 chr3R_11690001 D9 1912 chr3R 11695720 11695769 chr3R 11695824 11695875 6 106 3.5 1.0 2.2 1.9 155 chr3R 11695720 intergenic not near genes chr3R 11695798 intergenic not near genes chr3R 11695875 intergenic not near genes chr3R_6_11695001 chr3R_11695001 D9 1913 chr3R 11757723 11757763 chr3R 11757845 11757887 5 124 3.5 3.0 3.2 1.2 164 chr3R 11757723 intron Lk6 - chr3R 11757805 intron Lk6 - chr3R 11757887 intron Lk6 - chr3R_5_11755001 chr3R_11755001 D9 1914 chr3R 11841047 11841093 chr3R 11846263 11846305 BS 23 5216 5.0 6.0 5.5 3.5 5258 chr3R 11841047 intron CG6959 - chr3R 11843676 intron CG6959 - chr3R 11846305 intron CG6959 - chr3R_23_11840001 chr3R_11840001 D9 1915 chr3R 11879345 11879402 chr3R 11885192 11885249 37 5847 72.5 39.5 56.0 0.6 5904 chr3R 11879345 exon sad + chr3R 11882297 exon CG6962 - chr3R 11885249 intron,exon CG31368 +,mthl5 - chr3R_37_11880001 chr3R_11880001 D9 1916 chr3R 11920950 11920997 chr3R 11921072 11921113 9 121 8.0 3.5 5.8 1.3 163 chr3R 11920950 intron Cad87A - chr3R 11921032 intron Cad87A - chr3R 11921113 intron Cad87A - chr3R_9_11920001 chr3R_11920001 D9 1917 chr3R 11925341 11925392 chr3R 11927062 11927114 12 1721 9.5 11.0 10.2 1.1 1773 chr3R 11925341 intron Cad87A - chr3R 11926228 intron Cad87A - chr3R 11927114 intron Cad87A - chr3R_12_11925001 chr3R_11925001 D9 1918 chr3R 12022861 12022915 chr3R 12025063 12025117 pogo 10 2202 0.5 4.5 2.5 2.9 2256 chr3R 12022861 intergenic not near genes chr3R 12023989 intergenic not near genes chr3R 12025117 intergenic not near genes chr3R_10_12020001 chr3R_12020001 D9 1919 chr3R 12102846 12102885 chr3R 12102972 12103011 23 126 9.0 11.5 10.2 2.1 165 chr3R 12102846 intron dpr17 + chr3R 12102928 intron dpr17 + chr3R 12103011 intron dpr17 + chr3R_23_12100001 chr3R_12100001 D9 1920 chr3R 12149382 12149432 chr3R 12149492 12149542 22 110 5.0 5.5 5.2 3.5 160 chr3R 12149382 intron dpr15 - chr3R 12149462 intron dpr15 - chr3R 12149542 intron dpr15 - chr3R_22_12145001 chr3R_12145001 D9 1921 chr3R 12170705 12170764 chr3R 12170837 12170896 22 132 6.0 5.0 5.5 3.4 191 chr3R 12170705 intergenic not near genes chr3R 12170800 intergenic not near genes chr3R 12170896 intergenic not near genes chr3R_22_12170001 chr3R_12170001 D9 1922 chr3R 12175014 12175071 chr3R 12175242 12175299 14 228 2.5 3.5 3.0 3.5 285 chr3R 12175014 intergenic not near genes chr3R 12175156 intergenic not near genes chr3R 12175299 intergenic not near genes chr3R_14_12175001 chr3R_12175001 D9 1923 chr3R 12202264 12202320 chr3R 12202397 12202454 22 134 4.0 3.5 3.8 4.6 190 chr3R 12202264 intergenic not near genes chr3R 12202359 intergenic not near genes chr3R 12202454 intergenic not near genes chr3R_22_12200001 chr3R_12200001 D9 1924 chr3R 12214347 12214372 chr3R 12214463 12214488 13 116 7.0 12.0 9.5 1.2 141 chr3R 12214347 3` UTR CG4848 - chr3R 12214418 3` UTR CG4848 - chr3R 12214488 3` UTR CG4848 - chr3R_13_12210001 chr3R_12210001 D9 1925 chr3R 12247115 12247166 chr3R 12247225 12247276 13 110 6.0 2.0 4.0 2.6 161 chr3R 12247115 intergenic not near genes chr3R 12247196 intergenic not near genes chr3R 12247276 intergenic not near genes chr3R_13_12245001 chr3R_12245001 D9 1926 chr3R 12267832 12267887 chr3R 12267937 12267990 4 104 1.0 2.0 1.5 1.6 158 chr3R 12267832 intron svp + chr3R 12267911 intron svp + chr3R 12267990 intron svp + chr3R_4_12265001 chr3R_12265001 D9 1927 chr3R 12290832 12290869 chr3R 12290948 12290985 31 115 17.5 12.5 15.0 1.9 153 chr3R 12290832 intron svp + chr3R 12290908 intron svp + chr3R 12290985 intron svp + chr3R_31_12290001 chr3R_12290001 D9 1928 chr3R 12297628 12297645 chr3R 12297730 12297747 12 102 22.0 21.0 21.5 0.5 119 chr3R 12297628 intron svp + chr3R 12297688 intron svp + chr3R 12297747 intron svp + chr3R_12_12295001 chr3R_12295001 D9 1929 chr3R 12314204 12314251 chr3R 12314341 12314390 15 138 3.0 3.0 3.0 3.8 186 chr3R 12314204 intergenic not near genes chr3R 12314297 intergenic not near genes chr3R 12314390 intergenic not near genes chr3R_15_12310001 chr3R_12310001 D9 1930 chr3R 12344115 12344154 chr3R 12344217 12344256 7 102 2.0 5.5 3.8 1.5 141 chr3R 12344115 intergenic not near genes chr3R 12344186 intergenic not near genes chr3R 12344256 intergenic not near genes chr3R_7_12340001 chr3R_12340001 D9 1931 chr3R 12392865 12392901 chr3R 12392990 12393025 19 124 8.0 7.0 7.5 2.2 160 chr3R 12392865 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R 12392945 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R 12393025 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R_19_12390001 chr3R_12390001 D9 1932 chr3R 12436429 12436482 chr3R 12436541 12436592 32 111 4.5 5.0 4.8 5.5 163 chr3R 12436429 exon Desat2 + chr3R 12436510 exon Desat2 + chr3R 12436592 exon Desat2 + chr3R_32_12435001 chr3R_12435001 D9 1933 chr3R 12542374 12542426 chr3R 12542482 12542534 16 106 7.0 4.0 5.5 2.5 160 chr3R 12542374 intron Octbeta3R - chr3R 12542454 intron Octbeta3R - chr3R 12542534 intron Octbeta3R - chr3R_16_12540001 chr3R_12540001 D9 1934 chr3R 12599350 12599403 chr3R 12599458 12599511 17 108 2.5 5.0 3.8 3.5 161 chr3R 12599350 intergenic not near genes chr3R 12599430 intergenic not near genes chr3R 12599511 intergenic not near genes chr3R_17_12595001 chr3R_12595001 D9 1935 chr3R 12602375 12602414 chr3R 12602478 12602517 12 102 9.0 5.0 7.0 1.5 142 chr3R 12602375 intergenic not near genes chr3R 12602446 intergenic not near genes chr3R 12602517 intergenic not near genes chr3R_12_12600001 chr3R_12600001 D9 1936 chr3R 12666750 12666790 chr3R 12666896 12666942 10 151 3.5 2.0 2.8 2.6 192 chr3R 12666750 intron CG14395 + chr3R 12666846 intron CG14395 + chr3R 12666942 intron CG14395 + chr3R_10_12665001 chr3R_12665001 D9 1937 chr3R 12733452 12733507 chr3R 12733554 12733609 32 102 4.5 10.0 7.2 3.9 157 chr3R 12733452 intergenic not near genes chr3R 12733530 intergenic not near genes chr3R 12733609 intergenic not near genes chr3R_32_12730001 chr3R_12730001 D9 1938 chr3R 12787928 12787947 chr3R 12788036 12788055 5 108 1.0 5.0 3.0 1.2 127 chr3R 12787928 intergenic not near genes chr3R 12787992 intergenic not near genes chr3R 12788055 intergenic not near genes chr3R_5_12785001 chr3R_12785001 D9 1939 chr3R 12810032 12810042 chr3R 12810134 12810144 8 102 18.0 8.0 13.0 0.6 112 chr3R 12810032 intergenic not near genes chr3R 12810088 intergenic not near genes chr3R 12810144 intergenic not near genes chr3R_8_12810001 chr3R_12810001 D9 1940 chr3R 12810043 12810085 chr3R 12810132 12810177 19 98 7.5 8.0 7.8 2.2 134 chr3R 12810043 intergenic not near genes chr3R 12810110 intergenic not near genes chr3R 12810177 intergenic not near genes chr3R_19_12810001 chr3R_12810001 D9 1941 chr3R 12866465 12866513 chr3R 12866641 12866689 16 176 3.0 3.0 3.0 4.0 224 chr3R 12866465 intergenic not near genes chr3R 12866577 intergenic not near genes chr3R 12866689 intergenic not near genes chr3R_16_12865001 chr3R_12865001 D9 1942 chr3R 12886898 12886953 chr3R 12887008 12887063 22 110 9.0 5.5 7.2 2.7 165 chr3R 12886898 intergenic not near genes chr3R 12886980 intergenic not near genes chr3R 12887063 intergenic not near genes chr3R_22_12885001 chr3R_12885001 D9 1943 chr3R 12920140 12920181 chr3R 12925368 12925409 copia 16 5228 6.0 8.0 7.0 2.0 5269 chr3R 12920140 intron beat-Vb + chr3R 12922774 intron beat-Vb + chr3R 12925409 intron beat-Vb + chr3R_16_12920001 chr3R_12920001 D9 1944 chr3R 12926706 12926746 chr3R 12926842 12926882 10 136 1.5 3.5 2.5 2.9 176 chr3R 12926706 intron beat-Vb + chr3R 12926794 intron beat-Vb + chr3R 12926882 intron beat-Vb + chr3R_10_12925001 chr3R_12925001 D9 1945 chr3R 13027003 13027035 chr3R 13027109 13027141 9 105 3.5 7.5 5.5 1.4 138 chr3R 13027003 3` UTR CG12360 - chr3R 13027072 3` UTR CG12360 - chr3R 13027141 3` UTR CG12360 - chr3R_9_13025001 chr3R_13025001 D9 1946 chr3R 13059939 13059971 chr3R 13060159 13060189 9 220 4.0 2.5 3.2 2.1 250 chr3R 13059939 intron sim + chr3R 13060064 intron sim + chr3R 13060189 intron sim + chr3R_9_13060001 chr3R_13060001 D9 1947 chr3R 13066982 13067113 chr3R 13067092 13067214 10 110 0.0 0.0 0.0 10.0 232 chr3R 13066982 intron sim + chr3R 13067098 intron sim + chr3R 13067214 intron sim + chr3R_10_13065001 chr3R_13065001 D9 1948 chr3R 13075333 13075360 chr3R 13075439 13075466 5 106 6.5 1.5 4.0 1.0 133 chr3R 13075333 intron sim + chr3R 13075400 intron sim + chr3R 13075466 intron sim + chr3R_5_13075001 chr3R_13075001 D9 1949 chr3R 13120746 13120795 chr3R 13120848 13120897 19 102 3.0 6.0 4.5 3.5 151 chr3R 13120746 intron timeout + chr3R 13120822 intron timeout + chr3R 13120897 intron timeout + chr3R_19_13120001 chr3R_13120001 D9 1950 chr3R 13135820 13135857 chr3R 13138020 13138055 pogo 8 2200 6.0 4.5 5.2 1.3 2235 chr3R 13135820 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13136938 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138055 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_8_13135001 chr3R_13135001 D9 1951 chr3R 13143015 13143063 chr3R 13148616 13148658 mdg3 22 5600 9.0 10.0 9.5 2.1 5643 chr3R 13143015 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145836 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148658 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_22_13145001 chr3R_13145001 D9 1952 chr3R 13195925 13195984 chr3R 13196045 13196104 20 120 7.0 5.0 6.0 2.9 179 chr3R 13195925 intergenic not near genes chr3R 13196014 intergenic not near genes chr3R 13196104 intergenic not near genes chr3R_20_13195001 chr3R_13195001 D9 1953 chr3R 13198304 13198349 chr3R 13198628 13198671 8 324 12.5 4.0 8.2 0.9 367 chr3R 13198304 intergenic not near genes chr3R 13198488 intergenic not near genes chr3R 13198671 intergenic not near genes chr3R_8_13195001 chr3R_13195001 D9 1954 chr3R 13197947 13197985 chr3R 13198549 13198587 7 602 25.5 5.0 15.2 0.4 640 chr3R 13197947 intergenic not near genes chr3R 13198267 intergenic not near genes chr3R 13198587 intergenic not near genes chr3R_7_13195001 chr3R_13195001 D9 1955 chr3R 13248635 13248665 chr3R 13248759 13248789 6 124 3.0 0.5 1.8 2.1 154 chr3R 13248635 intron Ace - chr3R 13248712 intron Ace - chr3R 13248789 intron Ace - chr3R_6_13245001 chr3R_13245001 D9 1956 chr3R 13314075 13314116 chr3R 13318889 13318929 Doc 8 4813 3.0 5.0 4.0 1.6 4854 chr3R 13314075 intergenic not near genes chr3R 13316502 intergenic not near genes chr3R 13318929 intergenic CG45080 - chr3R_8_13315001 chr3R_13315001 D9 1957 chr3R 13456352 13456395 chr3R 13456466 13456509 11 114 6.0 5.0 5.5 1.7 157 chr3R 13456352 intron,intron CG14372 +,CR17025 - chr3R 13456430 intron,intron CG14372 +,CR17025 - chr3R 13456509 intron,intron CG14372 +,CR17025 - chr3R_11_13455001 chr3R_13455001 D9 1958 chr3R 13505833 13505866 chr3R 13505934 13505967 15 101 6.0 6.0 6.0 2.1 134 chr3R 13505833 intergenic not near genes chr3R 13505900 intergenic not near genes chr3R 13505967 intergenic not near genes chr3R_15_13505001 chr3R_13505001 D9 1959 chr3R 13554125 13554173 chr3R 13554229 13554272 20 101 5.0 9.0 7.0 2.5 147 chr3R 13554125 intergenic not near genes chr3R 13554198 intergenic not near genes chr3R 13554272 intergenic not near genes chr3R_20_13550001 chr3R_13550001 D9 1960 chr3R 13558015 13558051 chr3R 13558127 13558163 7 112 4.5 5.0 4.8 1.2 148 chr3R 13558015 intergenic not near genes chr3R 13558089 intergenic not near genes chr3R 13558163 intergenic not near genes chr3R_7_13555001 chr3R_13555001 D9 1961 chr3R 13580821 13580828 chr3R 13580923 13580930 6 102 11.0 10.0 10.5 0.5 109 chr3R 13580821 intergenic not near genes chr3R 13580876 intergenic not near genes chr3R 13580930 intergenic not near genes chr3R_6_13580001 chr3R_13580001 D9 1962 chr3R 13584676 13584715 chr3R 13584832 13584871 4 156 3.0 4.0 3.5 0.9 195 chr3R 13584676 intergenic not near genes chr3R 13584774 intergenic not near genes chr3R 13584871 intergenic not near genes chr3R_4_13580001 chr3R_13580001 D9 1963 chr3R 13603034 13603072 chr3R 13603150 13603188 11 116 4.0 5.0 4.5 2.0 154 chr3R 13603034 intergenic not near genes chr3R 13603111 intergenic not near genes chr3R 13603188 intergenic not near genes chr3R_11_13600001 chr3R_13600001 D9 1964 chr3R 13672923 13672964 chr3R 13673026 13673067 9 103 4.5 1.5 3.0 2.2 144 chr3R 13672923 intron Task6 - chr3R 13672995 intron Task6 - chr3R 13673067 intron Task6 - chr3R_9_13670001 chr3R_13670001 D9 1965 chr3R 13693026 13693028 chr3R 21907534 21907536 17 8214507 15.0 26.0 20.5 0.8 8214510 chr3R 13693026 3` UTR flfl + chr3R 17800281 exon CG17803 - chr3R 21907536 intergenic CG6678 + chr3R_17_17800001 chr3R_17800001 D9 1966 chr3R 13714502 13714539 chr3R 13714666 13714703 5 164 0.0 4.0 2.0 1.7 201 chr3R 13714502 intergenic CR34044 - chr3R 13714602 intergenic CR34044 - chr3R 13714703 intergenic CR34044 - chr3R_5_13710001 chr3R_13710001 D9 1967 chr3R 13719464 13719489 chr3R 13719990 13720017 9 527 4.0 4.5 4.2 1.7 553 chr3R 13719464 intron CG34383 + chr3R 13719740 intron CG34383 + chr3R 13720017 intron CG34383 + chr3R_9_13715001 chr3R_13715001 D9 1968 chr3R 13782026 13782075 chr3R 13782132 13782181 11 105 7.5 4.0 5.8 1.6 155 chr3R 13782026 exon CG9286 + chr3R 13782104 intergenic CG9286 +,Dip-B + chr3R 13782181 intergenic CG9286 +,Dip-B + chr3R_11_13780001 chr3R_13780001 D9 1969 chr3R 13831252 13831296 chr3R 13887709 13887752 11 56456 3.5 3.5 3.5 2.4 56500 chr3R 13831252 intergenic not near genes chr3R 13859502 intergenic not near genes chr3R 13887752 intergenic not near genes chr3R_11_13855001 chr3R_13855001 D9 1970 chr3R 13974494 13974537 chr3R 13974596 13974639 5 102 1.0 1.5 1.2 2.3 145 chr3R 13974494 intron,5` UTR rdx -,CR43460 + chr3R 13974566 intron,5` UTR rdx -,CR43460 + chr3R 13974639 intron,5` UTR rdx -,CR43460 + chr3R_5_13970001 chr3R_13970001 D9 1971 chr3R 14037560 14037577 chr3R 14037664 14037681 4 103 6.0 2.5 4.2 0.8 121 chr3R 14037560 intergenic not near genes chr3R 14037620 intergenic not near genes chr3R 14037681 intergenic not near genes chr3R_4_14035001 chr3R_14035001 D9 1972 chr3R 14058103 14058144 chr3R 14058247 14058289 7 145 0.5 2.0 1.2 3.2 186 chr3R 14058103 5` UTR foxo + chr3R 14058196 intron foxo + chr3R 14058289 intron foxo + chr3R_7_14055001 chr3R_14055001 D9 1973 chr3R 14067134 14067155 chr3R 14067238 14067259 7 103 2.0 7.0 4.5 1.3 125 chr3R 14067134 exon foxo + chr3R 14067196 intron foxo + chr3R 14067259 intron foxo + chr3R_7_14065001 chr3R_14065001 D9 1974 chr3R 14070105 14070139 chr3R 14070209 14070245 10 106 4.0 5.5 4.8 1.7 140 chr3R 14070105 intron foxo + chr3R 14070175 intron foxo + chr3R 14070245 intron foxo + chr3R_10_14070001 chr3R_14070001 D9 1975 chr3R 14174935 14174980 chr3R 14175047 14175092 6 110 2.5 2.5 2.5 1.7 157 chr3R 14174935 3` UTR Dop1R1 - chr3R 14175014 3` UTR Dop1R1 - chr3R 14175092 3` UTR Dop1R1 - chr3R_6_14175001 chr3R_14175001 D9 1976 chr3R 14246370 14246418 chr3R 14247891 14247934 jockey 22 1519 9.5 1.5 5.5 3.4 1564 chr3R 14246370 intergenic not near genes chr3R 14247152 intergenic not near genes chr3R 14247934 intergenic not near genes chr3R_22_14245001 chr3R_14245001 D9 1977 chr3R 14248704 14248738 chr3R 14248807 14248841 8 102 2.0 3.0 2.5 2.3 137 chr3R 14248704 intergenic not near genes chr3R 14248772 intergenic not near genes chr3R 14248841 intergenic not near genes chr3R_8_14245001 chr3R_14245001 D9 1978 chr3R 14527379 14527412 chr3R 14527480 14527514 17 102 8.0 8.0 8.0 1.9 135 chr3R 14527379 intron Pde6 - chr3R 14527446 intron Pde6 - chr3R 14527514 intron Pde6 - chr3R_17_14525001 chr3R_14525001 D9 1979 chr3R 14597597 14597638 chr3R 14597777 14597818 19 179 3.0 5.5 4.2 3.7 221 chr3R 14597597 intron stumps + chr3R 14597708 intron stumps + chr3R 14597818 intron stumps + chr3R_19_14595001 chr3R_14595001 D9 1980 chr3R 14688101 14688142 chr3R 14688207 14688248 5 106 3.5 0.0 1.8 1.8 147 chr3R 14688101 intron Meltrin - chr3R 14688174 intron Meltrin - chr3R 14688248 intron Meltrin - chr3R_5_14685001 chr3R_14685001 D9 1981 chr3R 14704363 14704411 chr3R 14704465 14704511 8 102 5.0 2.0 3.5 1.8 148 chr3R 14704363 intron kibra - chr3R 14704437 intron kibra - chr3R 14704511 intron kibra - chr3R_8_14700001 chr3R_14700001 D9 1982 chr3R 14766164 14766211 chr3R 14766344 14766392 17 179 3.0 2.5 2.8 4.5 228 chr3R 14766164 intron jvl + chr3R 14766278 intron jvl + chr3R 14766392 intron jvl + chr3R_17_14765001 chr3R_14765001 D9 1983 chr3R 14821594 14821647 chr3R 14821768 14821821 11 174 1.0 1.5 1.2 5.0 227 chr3R 14821594 intron btsz - chr3R 14821708 intron btsz - chr3R 14821821 intron btsz - chr3R_11_14820001 chr3R_14820001 D9 1984 chr3R 14833452 14833511 chr3R 14834283 14834342 32 830 5.5 9.5 7.5 3.8 890 chr3R 14833452 intron btsz - chr3R 14833897 intron btsz - chr3R 14834342 intron btsz - chr3R_32_14830001 chr3R_14830001 D9 1985 chr3R 14847935 14847958 chr3R 14848039 14848052 6 102 3.0 2.5 2.8 1.6 117 chr3R 14847935 intron btsz - chr3R 14847994 intron btsz - chr3R 14848052 intron btsz - chr3R_6_14845001 chr3R_14845001 D9 1986 chr3R 14880716 14880774 chr3R 14880957 14881015 32 240 35.0 31.5 33.2 0.9 299 chr3R 14880716 exon CG3631 + chr3R 14880866 intron CG3631 + chr3R 14881015 exon CG3631 + chr3R_32_14880001 chr3R_14880001 D9 1987 chr3R 14881457 14881748 chr3R 14881595 14881882 37 136 32.5 36.0 34.2 1.1 425 chr3R 14881457 exon CG3631 + chr3R 14881670 exon CG3631 + chr3R 14881882 exon CG3631 + chr3R_37_14880001 chr3R_14880001 D9 1988 chr3R 14898450 14898501 chr3R 14898594 14898646 11 144 1.0 3.5 2.2 3.4 196 chr3R 14898450 intergenic Nup93-2 -,CG3817 + chr3R 14898548 intergenic Nup93-2 -,CG3817 + chr3R 14898646 intergenic CG3817 +,Nup93-2 - chr3R_11_14895001 chr3R_14895001 D9 1989 chr3R 14923687 14923747 chr3R 14923788 14923849 16 101 6.0 6.0 6.0 2.3 162 chr3R 14923687 3` UTR CR45598 - chr3R 14923768 intergenic CR45598 - chr3R 14923849 intergenic CR45598 - chr3R_16_14920001 chr3R_14920001 D9 1990 chr3R 14944883 14944895 chr3R 14944988 14945001 9 106 3.0 9.0 6.0 1.3 118 chr3R 14944883 intergenic not near genes chr3R 14944942 intergenic not near genes chr3R 14945001 intergenic not near genes chr3R_9_14940001 chr3R_14940001 D9 1991 chr3R 14968343 14968377 chr3R 14968450 14968484 20 107 11.0 6.5 8.8 2.0 141 chr3R 14968343 intergenic not near genes chr3R 14968414 intergenic not near genes chr3R 14968484 intergenic not near genes chr3R_20_14965001 chr3R_14965001 D9 1992 chr3R 15026306 15026334 chr3R 15026417 15026445 14 110 3.0 5.5 4.2 2.7 139 chr3R 15026306 intergenic not near genes chr3R 15026376 intergenic not near genes chr3R 15026445 intergenic not near genes chr3R_14_15025001 chr3R_15025001 D9 1993 chr3R 15059258 15059480 chr3R 15059477 15059592 BS 13 204 0.0 0.0 0.0 13.0 334 chr3R 15059258 intron dpr9 - chr3R 15059425 intron dpr9 - chr3R 15059592 intron dpr9 - chr3R_13_15055001 chr3R_15055001 D9 1994 chr3R 15078327 15078371 chr3R 15078432 15078473 12 105 3.0 4.0 3.5 2.7 146 chr3R 15078327 intergenic CG6974 - chr3R 15078400 intergenic CG6974 - chr3R 15078473 intergenic CG6974 - chr3R_12_15075001 chr3R_15075001 D9 1995 chr3R 15079781 15079835 chr3R 15080047 15080100 pogo 8 265 3.0 1.0 2.0 2.7 319 chr3R 15079781 3` UTR CG6966 - chr3R 15079940 3` UTR CG6966 - chr3R 15080100 3` UTR CG6966 - chr3R_8_15075001 chr3R_15075001 D9 1996 chr3R 15084129 15084176 chr3R 15084286 15084333 16 157 2.0 7.0 4.5 2.9 204 chr3R 15084129 intron CG6966 - chr3R 15084231 intron CG6966 - chr3R 15084333 intron CG6966 - chr3R_16_15080001 chr3R_15080001 D9 1997 chr3R 15087143 15087160 chr3R 15087247 15087263 8 103 2.5 0.0 1.2 3.6 120 chr3R 15087143 intron CG6966 - chr3R 15087203 intron CG6966 - chr3R 15087263 intron CG6966 - chr3R_8_15085001 chr3R_15085001 D9 1998 chr3R 15102471 15102523 chr3R 15109753 15109801 412 10 7281 2.0 2.0 2.0 3.3 7330 chr3R 15102471 intron CG42788 - chr3R 15106136 intron CG42788 - chr3R 15109801 intron CG42788 - chr3R_10_15105001 chr3R_15105001 D9 1999 chr3R 15132040 15132075 chr3R 15135125 15135156 Juan 24 3084 18.0 12.0 15.0 1.5 3116 chr3R 15132040 intergenic CG42788 - chr3R 15133598 intergenic not near genes chr3R 15135156 3` UTR CG6912 - chr3R_24_15130001 chr3R_15130001 D9 2000 chr3R 15130866 15130908 chr3R 15141205 15141244 21 10337 43.5 72.5 58.0 0.4 10378 chr3R 15130866 intron CG42788 - chr3R 15136055 exon CG6912 - chr3R 15141244 exon CG3987 + chr3R_21_15135001 chr3R_15135001 D9 2001 chr3R 15160306 15160355 chr3R 15160427 15160480 22 124 4.5 2.0 3.2 5.2 174 chr3R 15160306 intron Gyc88E + chr3R 15160393 intron Gyc88E + chr3R 15160480 intron Gyc88E + chr3R_22_15160001 chr3R_15160001 D9 2002 chr3R 15162519 15162547 chr3R 15167312 15167340 F-element 8 4793 5.5 1.5 3.5 1.8 4821 chr3R 15162519 intron Gyc88E + chr3R 15164930 intron Gyc88E + chr3R 15167340 intron Gyc88E + chr3R_8_15160001 chr3R_15160001 D9 2003 chr3R 15286987 15286988 chr3R 21907534 21907535 6 6620548 13.5 26.0 19.8 0.3 6620548 chr3R 15286987 intron Tm1 + chr3R 18597261 intron,exon qin +,CG14304 - chr3R 21907535 intergenic CG6678 + chr3R_6_18595001 chr3R_18595001 D9 2004 chr3R 15462884 15462940 chr3R 15462996 15463052 17 112 2.5 0.0 1.2 7.7 168 chr3R 15462884 intron AdamTS-A - chr3R 15462968 intron AdamTS-A - chr3R 15463052 intron AdamTS-A - chr3R_17_15460001 chr3R_15460001 D9 2005 chr3R 15592869 15592909 chr3R 15592978 15593018 6 109 3.5 2.5 3.0 1.5 149 chr3R 15592869 intergenic not near genes chr3R 15592944 intergenic not near genes chr3R 15593018 intergenic not near genes chr3R_6_15590001 chr3R_15590001 D9 2006 chr3R 15594658 15594675 chr3R 15594766 15594783 6 108 0.0 9.0 4.5 1.1 125 chr3R 15594658 intergenic not near genes chr3R 15594720 intergenic not near genes chr3R 15594783 intergenic not near genes chr3R_6_15590001 chr3R_15590001 D9 2007 chr3R 15601150 15601194 chr3R 15608697 15608741 412 10 7547 4.5 4.5 4.5 1.8 7591 chr3R 15601150 intergenic not near genes chr3R 15604946 intergenic not near genes chr3R 15608741 intergenic not near genes chr3R_10_15600001 chr3R_15600001 D9 2008 chr3R 15618734 15618762 chr3R 15626231 15626261 blood 6 7498 0.5 7.5 4.0 1.2 7527 chr3R 15618734 intergenic not near genes chr3R 15622498 intergenic not near genes chr3R 15626261 intergenic not near genes chr3R_6_15620001 chr3R_15620001 D9 2009 chr3R 15646775 15646800 chr3R 15646881 15646908 11 107 3.0 5.5 4.2 2.1 133 chr3R 15646775 intergenic not near genes chr3R 15646842 intergenic not near genes chr3R 15646908 intergenic not near genes chr3R_11_15645001 chr3R_15645001 D9 2010 chr3R 15734168 15734194 chr3R 15734284 15734310 12 116 5.5 9.5 7.5 1.4 142 chr3R 15734168 intergenic not near genes chr3R 15734239 intergenic not near genes chr3R 15734310 intergenic not near genes chr3R_12_15730001 chr3R_15730001 D9 2011 chr3R 16033391 16033422 chr3R 16033497 16033528 4 106 3.0 3.0 3.0 1.0 137 chr3R 16033391 intron pnr + chr3R 16033460 intron pnr + chr3R 16033528 intron pnr + chr3R_4_16030001 chr3R_16030001 D9 2012 chr3R 16472562 16472594 chr3R 16472663 16472684 13 100 11.5 9.5 10.5 1.1 122 chr3R 16472562 intergenic Gyc-89Da + chr3R 16472623 5` UTR Gyc-89Da + chr3R 16472684 5` UTR Gyc-89Da + chr3R_13_16470001 chr3R_16470001 D9 2013 chr3R 16519905 16519929 chr3R 16520023 16520047 8 118 17.5 8.0 12.8 0.6 142 chr3R 16519905 intron CG42342 + chr3R 16519976 intron CG42342 + chr3R 16520047 intron CG42342 + chr3R_8_16515001 chr3R_16515001 D9 2014 chr3R 16534429 16534446 chr3R 16534542 16534559 6 113 9.5 2.5 6.0 0.9 130 chr3R 16534429 intron CG42342 + chr3R 16534494 intron CG42342 + chr3R 16534559 intron CG42342 + chr3R_6_16530001 chr3R_16530001 D9 2015 chr3R 16563684 16563699 chr3R 16563786 16563803 4 104 10.0 10.0 10.0 0.4 119 chr3R 16563684 intron CG42342 + chr3R 16563744 intron CG42342 + chr3R 16563803 intron CG42342 + chr3R_4_16560001 chr3R_16560001 D9 2016 chr3R 16582884 16582917 chr3R 16582988 16583021 21 103 11.0 7.5 9.2 2.1 137 chr3R 16582884 intron Scp2 - chr3R 16582952 intron Scp2 - chr3R 16583021 intron Scp2 - chr3R_21_16580001 chr3R_16580001 D9 2017 chr3R 16731910 16731947 chr3R 16732016 16732052 7 104 2.5 2.0 2.2 2.2 142 chr3R 16731910 intron Ubx - chr3R 16731981 intron Ubx - chr3R 16732052 intron Ubx - chr3R_7_16730001 chr3R_16730001 D9 2018 chr3R 16756294 16756353 chr3R 16762510 16762556 diver 14 6214 4.5 5.5 5.0 2.3 6262 chr3R 16756294 intron bxd - chr3R 16759425 intron bxd - chr3R 16762556 intron bxd - chr3R_14_16755001 chr3R_16755001 D9 2019 chr3R 17120481 17120523 chr3R 17120730 17120773 8 249 2.5 1.0 1.8 2.9 292 chr3R 17120481 intron,exon cher -,CG34278 + chr3R 17120627 intron,exon cher -,CG34278 + chr3R 17120773 intron,3` UTR cher -,CG34278 + chr3R_8_17120001 chr3R_17120001 D9 2020 chr3R 17245466 17245482 chr3R 17245623 17245639 11 157 10.0 9.5 9.8 1.0 173 chr3R 17245466 intron beat-IIb - chr3R 17245552 intron beat-IIb - chr3R 17245639 intron beat-IIb - chr3R_11_17245001 chr3R_17245001 D9 2021 chr3R 17294649 17294693 chr3R 17295102 17295146 BS 19 453 3.0 5.0 4.0 3.8 497 chr3R 17294649 intergenic not near genes chr3R 17294898 intergenic not near genes chr3R 17295146 intergenic not near genes chr3R_19_17290001 chr3R_17290001 D9 2022 chr3R 17335133 17335187 chr3R 17335234 17335288 15 101 5.0 2.5 3.8 3.1 155 chr3R 17335133 intron beat-IIa - chr3R 17335210 intron beat-IIa - chr3R 17335288 intron beat-IIa - chr3R_15_17335001 chr3R_17335001 D9 2023 chr3R 17346246 17346247 chr3R 21907534 21907535 10 4561288 29.5 26.0 27.8 0.3 4561289 chr3R 17346246 intron beat-IIa - chr3R 19626890 intron CG6231 - chr3R 21907535 intergenic CG6678 + chr3R_10_19625001 chr3R_19625001 D9 2024 chr3R 17355467 17355523 chr3R 17355568 17355626 20 101 3.5 1.0 2.2 6.2 159 chr3R 17355467 intron beat-IIa - chr3R 17355546 intron beat-IIa - chr3R 17355626 intron beat-IIa - chr3R_20_17355001 chr3R_17355001 D9 2025 chr3R 17371374 17371433 chr3R 17371476 17371532 33 100 7.5 5.0 6.2 4.6 158 chr3R 17371374 3` UTR CR44256 - chr3R 17371453 3` UTR CR44256 - chr3R 17371532 3` UTR CR44256 - chr3R_33_17370001 chr3R_17370001 D9 2026 chr3R 17415948 17415991 chr3R 17416053 17416096 31 104 10.5 15.0 12.8 2.2 148 chr3R 17415948 exon CG5866 + chr3R 17416022 exon CG5866 + chr3R 17416096 exon CG5866 + chr3R_31_17415001 chr3R_17415001 D9 2027 chr3R 17452532 17452572 chr3R 17452757 17452797 10 225 2.0 3.0 2.5 2.9 265 chr3R 17452532 intergenic not near genes chr3R 17452664 intergenic not near genes chr3R 17452797 intergenic not near genes chr3R_10_17450001 chr3R_17450001 D9 2028 chr3R 17461197 17461224 chr3R 17461304 17461331 5 107 3.0 4.0 3.5 1.1 134 chr3R 17461197 intergenic not near genes chr3R 17461264 intergenic not near genes chr3R 17461331 intergenic not near genes chr3R_5_17460001 chr3R_17460001 D9 2029 chr3R 17467587 17467620 chr3R 17467723 17467756 13 135 5.5 8.5 7.0 1.6 169 chr3R 17467587 intergenic not near genes chr3R 17467672 intergenic not near genes chr3R 17467756 intergenic not near genes chr3R_13_17465001 chr3R_17465001 D9 2030 chr3R 17586690 17586740 chr3R 17586820 17586870 7 130 4.5 4.0 4.2 1.3 180 chr3R 17586690 intergenic not near genes chr3R 17586780 intergenic not near genes chr3R 17586870 intergenic not near genes chr3R_7_17585001 chr3R_17585001 D9 2031 chr3R 17591275 17591320 chr3R 17591733 17591781 F-element 16 460 6.0 6.0 6.0 2.3 506 chr3R 17591275 intergenic not near genes chr3R 17591528 intergenic not near genes chr3R 17591781 intergenic not near genes chr3R_16_17590001 chr3R_17590001 D9 2032 chr3R 17653063 17653077 chr3R 17653173 17653192 5 114 7.0 1.0 4.0 1.0 129 chr3R 17653063 intron,intron CG14322 +,CR45223 - chr3R 17653128 intron,intron CG14322 +,CR45223 - chr3R 17653192 intron,intron CG14322 +,CR45223 - chr3R_5_17650001 chr3R_17650001 D9 2033 chr3R 17725060 17725069 chr3R 17725178 17725188 8 119 4.0 0.0 2.0 2.7 128 chr3R 17725060 intergenic Atg8b - chr3R 17725124 intergenic Atg8b - chr3R 17725188 intergenic Atg8b - chr3R_8_17725001 chr3R_17725001 D9 2034 chr3R 17739158 17739213 chr3R 17739265 17739320 36 105 4.5 7.0 5.8 5.3 162 chr3R 17739158 intron TyrRII + chr3R 17739239 intron TyrRII + chr3R 17739320 intron TyrRII + chr3R_36_17735001 chr3R_17735001 D9 2035 chr3R 17773371 17773393 chr3R 17773476 17773498 7 105 2.5 6.0 4.2 1.3 127 chr3R 17773371 intron CG43102 - chr3R 17773434 intron CG43102 - chr3R 17773498 exon CG43102 - chr3R_7_17770001 chr3R_17770001 D9 2036 chr3R 17823188 17823209 chr3R 17823298 17823319 4 110 3.0 0.5 1.8 1.4 131 chr3R 17823188 intron tinc + chr3R 17823254 intron tinc + chr3R 17823319 intron tinc + chr3R_4_17820001 chr3R_17820001 D9 2037 chr3R 17845209 17845217 chr3R 17845311 17845319 7 101 6.5 13.5 10.0 0.6 110 chr3R 17845209 intron tinc + chr3R 17845264 intron tinc + chr3R 17845319 intron tinc + chr3R_7_17845001 chr3R_17845001 D9 2038 chr3R 17856017 17856032 chr3R 17856142 17856157 6 125 10.5 0.5 5.5 0.9 140 chr3R 17856017 intron tinc + chr3R 17856087 intron tinc + chr3R 17856157 intron tinc + chr3R_6_17855001 chr3R_17855001 D9 2039 chr3R 17898347 17898360 chr3R 17898454 17898464 9 106 8.0 17.5 12.8 0.7 117 chr3R 17898347 intron Rim - chr3R 17898406 intron Rim - chr3R 17898464 intron Rim - chr3R_9_17895001 chr3R_17895001 D9 2040 chr3R 17925835 17925875 chr3R 17927327 17927367 hobo 15 1492 7.5 5.5 6.5 2.0 1532 chr3R 17925835 intron cpo + chr3R 17926601 intron cpo + chr3R 17927367 intron cpo + chr3R_15_17925001 chr3R_17925001 D9 2041 chr3R 17983198 17983229 chr3R 17983296 17983327 6 100 1.5 0.0 0.8 3.3 129 chr3R 17983198 intron cpo + chr3R 17983262 intron cpo + chr3R 17983327 intron cpo + chr3R_6_17980001 chr3R_17980001 D9 2042 chr3R 18032804 18032810 chr3R 18040501 18040508 opus 4 7698 0.5 5.5 3.0 1.0 7704 chr3R 18032804 intergenic not near genes chr3R 18036656 intergenic not near genes chr3R 18040508 intergenic not near genes chr3R_4_18035001 chr3R_18035001 D9 2043 chr3R 18041742 18041753 chr3R 18041844 18041855 4 102 1.5 0.0 0.8 2.2 113 chr3R 18041742 intergenic not near genes chr3R 18041798 intergenic not near genes chr3R 18041855 intergenic not near genes chr3R_4_18040001 chr3R_18040001 D9 2044 chr3R 18061420 18061457 chr3R 18061537 18061574 7 117 3.5 0.0 1.8 2.5 154 chr3R 18061420 intergenic not near genes chr3R 18061497 intergenic not near genes chr3R 18061574 intergenic not near genes chr3R_7_18060001 chr3R_18060001 D9 2045 chr3R 18067955 18068019 chr3R 18068076 18068126 10 113 0.0 7.0 3.5 2.2 171 chr3R 18067955 intergenic not near genes chr3R 18068040 intergenic not near genes chr3R 18068126 intergenic not near genes chr3R_10_18065001 chr3R_18065001 D9 2046 chr3R 18098277 18098289 chr3R 18098379 18098391 5 102 3.5 1.5 2.5 1.4 114 chr3R 18098277 intron sr + chr3R 18098334 intron sr + chr3R 18098391 intron sr + chr3R_5_18095001 chr3R_18095001 D9 2047 chr3R 18119719 18119752 chr3R 18119821 18119854 12 102 3.0 3.5 3.2 2.9 135 chr3R 18119719 intron sr + chr3R 18119786 intron sr + chr3R 18119854 intron sr + chr3R_12_18115001 chr3R_18115001 D9 2048 chr3R 18143469 18143510 chr3R 18143581 18143623 4 112 0.5 1.0 0.8 2.2 154 chr3R 18143469 intergenic not near genes chr3R 18143546 intergenic not near genes chr3R 18143623 intergenic not near genes chr3R_4_18140001 chr3R_18140001 D9 2049 chr3R 18157576 18157619 chr3R 18157706 18157752 5 132 0.0 6.0 3.0 1.2 176 chr3R 18157576 intergenic CR45103 + chr3R 18157664 intergenic CR45103 + chr3R 18157752 5` UTR CR45103 + chr3R_5_18155001 chr3R_18155001 D9 2050 chr3R 18215747 18215767 chr3R 18215939 18215944 9 191 0.0 4.0 2.0 3.0 197 chr3R 18215747 intergenic CG14314 + chr3R 18215846 intergenic CG14314 + chr3R 18215944 intergenic CG14314 + chr3R_9_18215001 chr3R_18215001 D9 2051 chr3R 18299268 18299321 chr3R 18302611 18302664 20 3343 50.5 37.5 44.0 0.4 3396 chr3R 18299268 5` UTR Dlc90F + chr3R 18300966 exon CG18600 - chr3R 18302664 exon CG7126 - chr3R_20_18300001 chr3R_18300001 D9 2052 chr3R 18328567 18328590 chr3R 18328668 18328691 11 101 5.5 10.5 8.0 1.2 124 chr3R 18328567 intron CG31235 - chr3R 18328629 intron CG31235 - chr3R 18328691 intron CG31235 - chr3R_11_18325001 chr3R_18325001 D9 2053 chr3R 18481167 18481210 chr3R 18481281 18481319 6 108 0.0 6.0 3.0 1.5 152 chr3R 18481167 intron fru - chr3R 18481243 intron fru - chr3R 18481319 intron fru - chr3R_6_18480001 chr3R_18480001 D9 2054 chr3R 18501586 18501614 chr3R 18501690 18501720 11 106 5.0 5.5 5.2 1.8 134 chr3R 18501586 intron fru - chr3R 18501653 intron fru - chr3R 18501720 intron fru - chr3R_11_18500001 chr3R_18500001 D9 2055 chr3R 18528357 18528396 chr3R 18528469 18528508 11 112 1.5 2.5 2.0 3.7 151 chr3R 18528357 intron fru - chr3R 18528432 intron fru - chr3R 18528508 intron fru - chr3R_11_18525001 chr3R_18525001 D9 2056 chr3R 18553194 18553207 chr3R 18553340 18553356 7 148 4.5 3.5 4.0 1.4 162 chr3R 18553194 intergenic not near genes chr3R 18553275 intergenic not near genes chr3R 18553356 intergenic not near genes chr3R_7_18550001 chr3R_18550001 D9 2057 chr3R 18606481 18606529 chr3R 18610738 18610786 F-element 7 4257 4.0 3.5 3.8 1.5 4305 chr3R 18606481 intron,intron qin +,CG14304 - chr3R 18608634 intron,intron qin +,CG14304 - chr3R 18610786 intron,intron qin +,CG14304 - chr3R_7_18605001 chr3R_18605001 D9 2058 chr3R 18618258 18618297 chr3R 18618366 18618407 6 109 1.0 3.0 2.0 2.0 149 chr3R 18618258 intron,intron qin +,CG14304 - chr3R 18618332 intron,intron qin +,CG14304 - chr3R 18618407 intron,intron qin +,CG14304 - chr3R_6_18615001 chr3R_18615001 D9 2059 chr3R 18644081 18644137 chr3R 18644183 18644239 8 102 2.0 2.0 2.0 2.7 158 chr3R 18644081 intron qin + chr3R 18644160 intron qin + chr3R 18644239 intron qin + chr3R_8_18640001 chr3R_18640001 D9 2060 chr3R 18695740 18695752 chr3R 18695849 18695858 5 108 10.0 0.0 5.0 0.8 118 chr3R 18695740 3` UTR CG34282 + chr3R 18695799 intergenic CG34282 + chr3R 18695858 intergenic CG34282 + chr3R_5_18695001 chr3R_18695001 D9 2061 chr3R 18721037 18721068 chr3R 18721199 18721230 7 162 2.0 5.0 3.5 1.6 193 chr3R 18721037 intron Cha + chr3R 18721134 intron Cha + chr3R 18721230 intron Cha + chr3R_7_18720001 chr3R_18720001 D9 2062 chr3R 18781667 18781723 chr3R 18781768 18781824 22 100 3.0 5.5 4.2 4.2 157 chr3R 18781667 intron CG7720 - chr3R 18781746 intron CG7720 - chr3R 18781824 intron CG7720 - chr3R_22_18780001 chr3R_18780001 D9 2063 chr3R 18807310 18807328 chr3R 18807411 18807429 7 101 5.5 0.0 2.8 1.8 119 chr3R 18807310 intron CG18208 - chr3R 18807370 intron CG18208 - chr3R 18807429 intron CG18208 - chr3R_7_18805001 chr3R_18805001 D9 2064 chr3R 18839788 18839838 chr3R 18839896 18839947 24 109 6.5 4.0 5.2 3.9 159 chr3R 18839788 intron CG18208 - chr3R 18839868 intron CG18208 - chr3R 18839947 intron CG18208 - chr3R_24_18835001 chr3R_18835001 D9 2065 chr3R 18887579 18887599 chr3R 18887684 18887705 11 105 12.5 11.0 11.8 0.9 126 chr3R 18887579 intergenic not near genes chr3R 18887642 intergenic not near genes chr3R 18887705 intergenic not near genes chr3R_11_18885001 chr3R_18885001 D9 2066 chr3R 18934420 18934438 chr3R 18934522 18934538 roo 10 101 4.5 11.0 7.8 1.1 118 chr3R 18934420 intron CG42613 + chr3R 18934479 intron CG42613 + chr3R 18934538 intron CG42613 + chr3R_10_18930001 chr3R_18930001 D9 2067 chr3R 18948049 18948070 chr3R 18952162 18952183 5 4113 19.0 19.0 19.0 0.2 4134 chr3R 18948049 intron CG42613 + chr3R 18950116 intron CG42613 + chr3R 18952183 intron,intron CG42613 +,CG43732 + chr3R_5_18950001 chr3R_18950001 D9 2068 chr3R 19085655 19085677 chr3R 19086018 19086040 4 363 6.5 6.0 6.2 0.6 385 chr3R 19085655 intron cdi - chr3R 19085848 intron cdi - chr3R 19086040 intron cdi - chr3R_4_19085001 chr3R_19085001 D9 2069 chr3R 19193002 19193008 chr3R 19197279 19197337 F-element 12 4308 4.5 4.5 4.5 2.2 4335 chr3R 19193002 intron CG31475 + chr3R 19195170 intron CG31475 + chr3R 19197337 intron CG31475 + chr3R_12_19195001 chr3R_19195001 D9 2070 chr3R 19276905 19276940 chr3R 19277010 19277045 10 103 3.5 0.5 2.0 3.3 140 chr3R 19276905 intergenic not near genes chr3R 19276975 intergenic not near genes chr3R 19277045 intergenic not near genes chr3R_10_19275001 chr3R_19275001 D9 2071 chr3R 19280537 19280586 chr3R 19280638 19280687 14 101 1.5 3.0 2.2 4.4 150 chr3R 19280537 intergenic not near genes chr3R 19280612 intergenic not near genes chr3R 19280687 intergenic not near genes chr3R_14_19280001 chr3R_19280001 D9 2072 chr3R 19344646 19344692 chr3R 19344806 19344852 6 160 4.0 0.0 2.0 2.0 206 chr3R 19344646 intergenic not near genes chr3R 19344749 intergenic not near genes chr3R 19344852 intergenic not near genes chr3R_6_19340001 chr3R_19340001 D9 2073 chr3R 19369485 19369511 chr3R 19369597 19369623 6 112 1.5 2.0 1.8 2.1 138 chr3R 19369485 intron Ino80 - chr3R 19369554 intron Ino80 - chr3R 19369623 intron Ino80 - chr3R_6_19365001 chr3R_19365001 D9 2074 chr3R 19418406 19418422 chr3R 19418523 19418539 4 117 5.5 0.0 2.8 1.1 133 chr3R 19418406 intron CG31221 + chr3R 19418472 intron CG31221 + chr3R 19418539 intron CG31221 + chr3R_4_19415001 chr3R_19415001 D9 2075 chr3R 19490432 19490467 chr3R 19490546 19490547 15 111 5.0 11.0 8.0 1.7 115 chr3R 19490432 intron,exon Dys +,CG15025 - chr3R 19490490 intron,intron Dys +,CG15025 - chr3R 19490547 intron,intron Dys +,CG15025 - chr3R_15_19490001 chr3R_19490001 D9 2076 chr3R 19590623 19590647 chr3R 19590740 19590764 11 117 5.5 9.0 7.2 1.3 141 chr3R 19590623 exon Dys + chr3R 19590694 intron Dys + chr3R 19590764 exon Dys + chr3R_11_19590001 chr3R_19590001 D9 2077 chr3R 19599037 19599094 chr3R 19599289 19599346 36 254 5.5 10.0 7.8 4.1 309 chr3R 19599037 intergenic Cpr92A - chr3R 19599192 intergenic Cpr92A - chr3R 19599346 intergenic Cpr92A - chr3R_36_19595001 chr3R_19595001 D9 2078 chr3R 19602737 19602776 chr3R 19602840 19602879 5 103 2.5 3.0 2.8 1.3 142 chr3R 19602737 intergenic CG7333 + chr3R 19602808 intergenic CG7333 + chr3R 19602879 intergenic CG7333 +,CG7342 + chr3R_5_19600001 chr3R_19600001 D9 2079 chr3R 19638478 19638522 chr3R 19638589 19638633 5 111 1.0 1.0 1.0 2.5 155 chr3R 19638478 intron subdued - chr3R 19638556 intron subdued - chr3R 19638633 intron subdued - chr3R_5_19635001 chr3R_19635001 D9 2080 chr3R 19678462 19678515 chr3R 19678579 19678632 14 117 3.0 3.0 3.0 3.5 170 chr3R 19678462 intron Naam + chr3R 19678547 intron Naam + chr3R 19678632 intron Naam + chr3R_14_19675001 chr3R_19675001 D9 2081 chr3R 19693443 19693454 chr3R 19693549 19693561 5 107 13.0 6.5 9.8 0.5 118 chr3R 19693443 intron Naam + chr3R 19693502 intron Naam + chr3R 19693561 intron Naam + chr3R_5_19690001 chr3R_19690001 D9 2082 chr3R 19827505 19827554 chr3R 19827616 19827664 9 111 5.0 4.0 4.5 1.6 159 chr3R 19827505 intron bnl - chr3R 19827584 intron bnl - chr3R 19827664 exon bnl - chr3R_9_19825001 chr3R_19825001 D9 2083 chr3R 19846934 19846965 chr3R 19847119 19847150 7 185 6.5 0.0 3.2 1.7 216 chr3R 19846934 intergenic CG4662 + chr3R 19847042 intergenic CG4662 + chr3R 19847150 intergenic CG4662 + chr3R_7_19845001 chr3R_19845001 D9 2084 chr3R 19908243 19908305 chr3R 19908352 19908414 8 109 0.0 3.0 1.5 3.2 171 chr3R 19908243 intron RhoGAP92B + chr3R 19908328 intron RhoGAP92B + chr3R 19908414 intron,3` UTR RhoGAP92B +,CR45048 - chr3R_8_19905001 chr3R_19905001 D9 2085 chr3R 19943853 19943877 chr3R 19943958 19943981 10 105 9.0 0.0 4.5 1.8 128 chr3R 19943853 intron Hs6st - chr3R 19943917 intron Hs6st - chr3R 19943981 intron Hs6st - chr3R_10_19940001 chr3R_19940001 D9 2086 chr3R 19953923 19953981 chr3R 19954025 19954075 29 101 10.0 11.5 10.8 2.5 152 chr3R 19953923 intron Hs6st - chr3R 19953999 intron Hs6st - chr3R 19954075 intron Hs6st - chr3R_29_19950001 chr3R_19950001 D9 2087 chr3R 19964991 19965042 chr3R 19965105 19965156 12 114 1.0 0.5 0.8 6.7 165 chr3R 19964991 intron Hs6st - chr3R 19965074 intron Hs6st - chr3R 19965156 intron Hs6st - chr3R_12_19965001 chr3R_19965001 D9 2088 chr3R 20008794 20008852 chr3R 20008900 20008958 13 106 2.0 5.0 3.5 2.9 164 chr3R 20008794 intergenic MED25 +,Hs6st - chr3R 20008876 intergenic MED25 +,Hs6st - chr3R 20008958 5` UTR MED25 + chr3R_13_20005001 chr3R_20005001 D9 2089 chr3R 20156679 20156718 chr3R 20165874 20165913 roo 10 9195 5.0 3.0 4.0 2.0 9234 chr3R 20156679 intergenic not near genes chr3R 20161296 intergenic not near genes chr3R 20165913 intergenic not near genes chr3R_10_20160001 chr3R_20160001 D9 2090 chr3R 20330984 20331028 chr3R 20331495 20331539 roo 4 511 2.5 3.5 3.0 1.0 555 chr3R 20330984 intergenic Sirt2 + chr3R 20331262 intergenic Sirt2 + chr3R 20331539 intergenic not near genes chr3R_4_20330001 chr3R_20330001 D9 2091 chr3R 20661325 20661375 chr3R 20661608 20661640 24 281 7.0 6.0 6.5 3.2 315 chr3R 20661325 intergenic not near genes chr3R 20661482 intergenic not near genes chr3R 20661640 intergenic not near genes chr3R_24_20660001 chr3R_20660001 D9 2092 chr3R 20707725 20707773 chr3R 20707965 20708013 10 240 2.0 5.0 3.5 2.2 288 chr3R 20707725 intron Oamb - chr3R 20707869 intron Oamb - chr3R 20708013 intron Oamb - chr3R_10_20705001 chr3R_20705001 D9 2093 chr3R 20722832 20722880 chr3R 20722984 20723032 19 152 6.5 9.0 7.8 2.2 200 chr3R 20722832 intergenic not near genes chr3R 20722932 intergenic not near genes chr3R 20723032 intergenic not near genes chr3R_19_20720001 chr3R_20720001 D9 2094 chr3R 20730906 20731059 chr3R 20731031 20731172 10 121 0.0 0.0 0.0 10.0 266 chr3R 20730906 intergenic not near genes chr3R 20731039 intergenic not near genes chr3R 20731172 intergenic CG31205 + chr3R_10_20730001 chr3R_20730001 D9 2095 chr3R 20771705 20771726 chr3R 20771811 20771832 6 105 0.0 4.5 2.2 1.9 127 chr3R 20771705 intron,intron Syp +,Takl1 - chr3R 20771768 intron,intron Syp +,Takl1 - chr3R 20771832 intron,exon Syp +,Takl1 - chr3R_6_20770001 chr3R_20770001 D9 2096 chr3R 20787414 20787456 chr3R 20787530 20787572 15 116 5.0 7.0 6.0 2.1 158 chr3R 20787414 intron Syp + chr3R 20787493 intron Syp + chr3R 20787572 intron Syp + chr3R_15_20785001 chr3R_20785001 D9 2097 chr3R 20841544 20841600 chr3R 20841729 20841788 10 187 3.5 5.5 4.5 1.8 244 chr3R 20841544 intergenic not near genes chr3R 20841666 intergenic CG15695 + chr3R 20841788 intergenic CG15695 + chr3R_10_20840001 chr3R_20840001 D9 2098 chr3R 20848342 20848353 chr3R 20848457 20848468 4 115 1.5 2.5 2.0 1.3 126 chr3R 20848342 intergenic not near genes chr3R 20848405 intergenic not near genes chr3R 20848468 intergenic not near genes chr3R_4_20845001 chr3R_20845001 D9 2099 chr3R 20854447 20854510 chr3R 20859267 20859318 Doc 11 4817 0.0 3.5 1.8 3.9 4871 chr3R 20854447 intron Ir93a - chr3R 20856882 intron Ir93a - chr3R 20859318 exon Ir93a - chr3R_11_20855001 chr3R_20855001 D9 2100 chr3R 20870226 20870284 chr3R 20870336 20870394 22 109 7.0 2.5 4.8 3.8 168 chr3R 20870226 intergenic not near genes chr3R 20870310 intergenic not near genes chr3R 20870394 intergenic not near genes chr3R_22_20870001 chr3R_20870001 D9 2101 chr3R 20901320 20901375 chr3R 20901431 20901486 22 111 8.0 7.0 7.5 2.6 166 chr3R 20901320 intergenic not near genes chr3R 20901403 intergenic not near genes chr3R 20901486 intergenic CG5621 + chr3R_22_20900001 chr3R_20900001 D9 2102 chr3R 21013991 21014026 chr3R 21014094 21014129 6 103 1.5 0.5 1.0 3.0 138 chr3R 21013991 3` UTR Calx + chr3R 21014060 3` UTR Calx + chr3R 21014129 3` UTR Calx + chr3R_6_21010001 chr3R_21010001 D9 2103 chr3R 21021613 21021656 chr3R 21021721 21021764 29 107 14.5 9.0 11.8 2.3 151 chr3R 21021613 intron CG17278 - chr3R 21021688 intron CG17278 - chr3R 21021764 intron CG17278 - chr3R_29_21020001 chr3R_21020001 D9 2104 chr3R 21049163 21049204 chr3R 21049322 21049363 4 159 1.5 3.0 2.2 1.2 200 chr3R 21049163 intergenic CG7079 - chr3R 21049263 intergenic CG7079 - chr3R 21049363 intergenic not near genes chr3R_4_21045001 chr3R_21045001 D9 2105 chr3R 21108014 21108049 chr3R 21108300 21108335 10 286 7.0 2.0 4.5 1.8 321 chr3R 21108014 intergenic Sec15 -,rtet + chr3R 21108174 intergenic Sec15 -,rtet + chr3R 21108335 intergenic rtet +,Sec15 - chr3R_10_21105001 chr3R_21105001 D9 2106 chr3R 21129797 21130012 chr3R 21129911 21130114 7 110 0.0 0.0 0.0 7.0 317 chr3R 21129797 intergenic Obp93a -,CG5793 +,Ice2 + chr3R 21129956 intergenic Obp93a -,Ice2 +,CG5793 + chr3R 21130114 intergenic Ice2 +,Obp93a - chr3R_7_21125001 chr3R_21125001 D9 2107 chr3R 21132606 21132648 chr3R 21132714 21132756 4 108 2.0 0.0 1.0 2.0 150 chr3R 21132606 3` UTR Ice2 + chr3R 21132681 3` UTR Ice2 + chr3R 21132756 exon CG7009 - chr3R_4_21130001 chr3R_21130001 D9 2108 chr3R 21141652 21141706 chr3R 21150158 21150210 Tirant 21 8505 6.5 11.5 9.0 2.1 8558 chr3R 21141652 intron SNF4Agamma + chr3R 21145931 intron SNF4Agamma + chr3R 21150210 intron SNF4Agamma + chr3R_21_21145001 chr3R_21145001 D9 2109 chr3R 21152004 21152023 chr3R 21152103 21152124 4 100 0.0 1.5 0.8 2.2 120 chr3R 21152004 intron SNF4Agamma + chr3R 21152064 intron SNF4Agamma + chr3R 21152124 intron SNF4Agamma + chr3R_4_21150001 chr3R_21150001 D9 2110 chr3R 21154553 21154587 chr3R 21154793 21154827 7 240 2.0 6.5 4.2 1.3 274 chr3R 21154553 intron SNF4Agamma + chr3R 21154690 intron SNF4Agamma + chr3R 21154827 intron SNF4Agamma + chr3R_7_21150001 chr3R_21150001 D9 2111 chr3R 21163247 21163272 chr3R 21163350 21163373 7 103 2.0 6.5 4.2 1.3 126 chr3R 21163247 intron SNF4Agamma + chr3R 21163310 intron SNF4Agamma + chr3R 21163373 intron SNF4Agamma + chr3R_7_21160001 chr3R_21160001 D9 2112 chr3R 21189674 21189715 chr3R 21189776 21189818 5 102 0.5 2.5 1.5 2.0 144 chr3R 21189674 intron SNF4Agamma + chr3R 21189746 intron SNF4Agamma + chr3R 21189818 intron SNF4Agamma + chr3R_5_21185001 chr3R_21185001 D9 2113 chr3R 21200382 21200438 chr3R 21200484 21200540 24 102 4.5 2.0 3.2 5.7 158 chr3R 21200382 intron SNF4Agamma + chr3R 21200461 intron SNF4Agamma + chr3R 21200540 intron SNF4Agamma + chr3R_24_21200001 chr3R_21200001 D9 2114 chr3R 21214721 21214752 chr3R 21214916 21214949 6 197 1.5 4.0 2.8 1.6 228 chr3R 21214721 intergenic CG5862 + chr3R 21214835 intergenic CG5862 + chr3R 21214949 intergenic CG5862 + chr3R_6_21210001 chr3R_21210001 D9 2115 chr3R 21322949 21323006 chr3R 21323053 21323113 13 104 4.5 2.5 3.5 2.9 164 chr3R 21322949 exon CG16791 - chr3R 21323031 intron CG16791 - chr3R 21323113 intron CG16791 - chr3R_13_21320001 chr3R_21320001 D9 2116 chr3R 21379455 21379462 chr3R 21379631 21379638 4 174 3.0 3.0 3.0 1.0 183 chr3R 21379455 intron tin + chr3R 21379546 intron tin + chr3R 21379638 intron tin + chr3R_4_21375001 chr3R_21375001 D9 2117 chr3R 21471995 21472031 chr3R 21472101 21472137 12 106 7.0 5.0 6.0 1.7 142 chr3R 21471995 intergenic not near genes chr3R 21472066 intergenic not near genes chr3R 21472137 intergenic not near genes chr3R_12_21470001 chr3R_21470001 D9 2118 chr3R 21506855 21506907 chr3R 21506966 21507012 10 110 2.5 2.0 2.2 3.1 157 chr3R 21506855 intron C15 + chr3R 21506934 intron C15 + chr3R 21507012 intron C15 + chr3R_10_21505001 chr3R_21505001 D9 2119 chr3R 21517994 21518269 chr3R 21518148 21518378 8 132 0.0 0.0 0.0 8.0 384 chr3R 21517994 intergenic not near genes chr3R 21518186 intergenic not near genes chr3R 21518378 intergenic not near genes chr3R_8_21515001 chr3R_21515001 D9 2120 chr3R 21519995 21520132 chr3R 21520121 21520251 7 122 0.0 0.0 0.0 7.0 256 chr3R 21519995 intergenic not near genes chr3R 21520123 intergenic not near genes chr3R 21520251 intergenic not near genes chr3R_7_21520001 chr3R_21520001 D9 2121 chr3R 21624082 21624119 chr3R 21624201 21624236 17 119 4.0 6.5 5.2 2.7 154 chr3R 21624082 exon E2f - chr3R 21624159 intron E2f - chr3R 21624236 intron E2f - chr3R_17_21620001 chr3R_21620001 D9 2122 chr3R 21709533 21709566 chr3R 21709965 21710000 9 434 5.0 2.5 3.8 1.9 467 chr3R 21709533 intron CG31176 - chr3R 21709766 intron CG31176 - chr3R 21710000 intron CG31176 - chr3R_9_21705001 chr3R_21705001 D9 2123 chr3R 21725670 21725686 chr3R 21725831 21725845 4 160 0.0 1.5 0.8 2.2 175 chr3R 21725670 intergenic not near genes chr3R 21725758 intergenic not near genes chr3R 21725845 intergenic not near genes chr3R_4_21725001 chr3R_21725001 D9 2124 chr3R 21735480 21735529 chr3R 21735582 21735631 6 102 4.0 4.5 4.2 1.2 151 chr3R 21735480 intergenic Sfp93F - chr3R 21735556 intergenic Sfp93F - chr3R 21735631 intergenic Sfp93F - chr3R_6_21735001 chr3R_21735001 D9 2125 chr3R 21757200 21757243 chr3R 21758394 21758439 12 1195 54.0 15.0 34.5 0.3 1239 chr3R 21757200 exon CG31198 + chr3R 21757820 intergenic CG31198 + chr3R 21758439 intergenic CG42335 + chr3R_12_21755001 chr3R_21755001 D9 2126 chr3R 21761098 21761150 chr3R 21768514 21768567 mdg1 37 7417 8.0 10.0 9.0 3.7 7469 chr3R 21761098 exon CG42335 + chr3R 21764832 intron CG42335 + chr3R 21768567 exon CG42335 + chr3R_37_21760001 chr3R_21760001 D9 2127 chr3R 21784853 21784862 chr3R 21784966 21784983 5 121 4.5 0.0 2.2 1.6 130 chr3R 21784853 3` UTR,3` UTR CASK -,CRG - chr3R 21784918 3` UTR,3` UTR CASK -,CRG - chr3R 21784983 3` UTR,3` UTR CASK -,CRG - chr3R_5_21780001 chr3R_21780001 D9 2128 chr3R 21814715 21814729 chr3R 21815083 21815097 8 368 7.0 7.0 7.0 1.0 382 chr3R 21814715 intron CASK - chr3R 21814906 intron CASK - chr3R 21815097 intron CASK - chr3R_8_21810001 chr3R_21810001 D9 2129 chr3R 21845865 21845911 chr3R 21846061 21846107 5 196 3.0 3.0 3.0 1.2 242 chr3R 21845865 5` UTR,exon CR44087 +,Gr93d - chr3R 21845986 intron,exon CR44087 +,Gr93d - chr3R 21846107 5` UTR,exon CR44087 +,Gr93d - chr3R_5_21845001 chr3R_21845001 D9 2130 chr3R 21858276 21858290 chr3R 21861044 21861049 6 2765 31.5 7.0 19.2 0.3 2773 chr3R 21858276 intergenic not near genes chr3R 21859662 intergenic not near genes chr3R 21861049 intergenic CR45644 -,CR45645 - chr3R_6_21855001 chr3R_21855001 D9 2131 chr3R 21903623 21903633 chr3R 21903745 21903755 4 122 0.0 5.0 2.5 1.1 132 chr3R 21903623 intron CG6678 + chr3R 21903689 intron CG6678 + chr3R 21903755 intron CG6678 + chr3R_4_21900001 chr3R_21900001 D9 2132 chr3R 8339246 8339247 chr3R 21907534 21907534 30 13568288 19.0 26.0 22.5 1.3 13568288 chr3R 8339246 intergenic not near genes chr3R 15123390 intron CG42788 - chr3R 21907534 intergenic CG6678 + chr3R_30_15120001 chr3R_15120001 D9 2133 chr3R 9620954 9620956 chr3R 21907534 21907534 10 12286578 17.0 26.0 21.5 0.4 12286580 chr3R 9620954 intron CG8312 + chr3R 15764244 intergenic not near genes chr3R 21907534 intergenic CG6678 + chr3R_10_15760001 chr3R_15760001 D9 2134 chr3R 13693024 13693028 chr3R 21907534 21907534 5 8214507 15.0 26.0 20.5 0.2 8214510 chr3R 13693024 3` UTR flfl + chr3R 17800279 exon CG17803 - chr3R 21907534 intergenic CG6678 + chr3R_5_17800001 chr3R_17800001 D9 2135 chr3R 15286987 15286988 chr3R 21907534 21907534 9 6620546 13.5 26.0 19.8 0.4 6620547 chr3R 15286987 intron Tm1 + chr3R 18597260 intron,exon qin +,CG14304 - chr3R 21907534 intergenic CG6678 + chr3R_9_18595001 chr3R_18595001 D9 2136 chr3R 17346245 17346247 chr3R 21907534 21907534 6 4561288 29.5 26.0 27.8 0.2 4561289 chr3R 17346245 intron beat-IIa - chr3R 19626890 intron CG6231 - chr3R 21907534 intergenic CG6678 + chr3R_6_19625001 chr3R_19625001 D9 2137 chr3R 21907534 21907534 chr3R 28831801 28831802 34 6924268 27.0 26.5 26.8 1.2 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_34_25365001 chr3R_25365001 D9 2138 chr3R 8339246 8339247 chr3R 21907535 21907535 21 13568288 19.0 26.5 22.8 0.9 13568289 chr3R 8339246 intergenic not near genes chr3R 15123390 intron CG42788 - chr3R 21907535 intergenic CG6678 + chr3R_21_15120001 chr3R_15120001 D9 2139 chr3R 9620954 9620957 chr3R 21907535 21907535 15 12286579 17.0 26.5 21.8 0.7 12286581 chr3R 9620954 intron CG8312 + chr3R 15764244 intergenic not near genes chr3R 21907535 intergenic CG6678 + chr3R_15_15760001 chr3R_15760001 D9 2140 chr3R 21907535 21907535 chr3R 28831801 28831802 39 6924266 27.0 26.5 26.8 1.4 6924267 chr3R 21907535 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_39_25365001 chr3R_25365001 D9 2141 chr3R 8339246 8339247 chr3R 21907536 21907536 9 13568289 19.0 26.5 22.8 0.4 13568290 chr3R 8339246 intergenic not near genes chr3R 15123391 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_9_15120001 chr3R_15120001 D9 2142 chr3R 21907536 21907536 chr3R 28831801 28831802 39 6924266 26.5 26.5 26.5 1.4 6924266 chr3R 21907536 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831802 intron WASp - chr3R_39_25365001 chr3R_25365001 D9 2143 chr3R 21985213 21985247 chr3R 21985343 21985377 6 129 4.0 2.0 3.0 1.5 164 chr3R 21985213 intron Eip93F + chr3R 21985295 intron Eip93F + chr3R 21985377 intron Eip93F + chr3R_6_21985001 chr3R_21985001 D9 2144 chr3R 22055563 22055580 chr3R 22055756 22055794 7 210 6.0 6.5 6.2 1.0 231 chr3R 22055563 intron how + chr3R 22055678 intron how + chr3R 22055794 intron how + chr3R_7_22055001 chr3R_22055001 D9 2145 chr3R 22069806 22069855 chr3R 22069926 22069974 12 117 1.5 4.0 2.8 3.2 168 chr3R 22069806 intron how + chr3R 22069890 intron how + chr3R 22069974 intron how + chr3R_12_22065001 chr3R_22065001 D9 2146 chr3R 22084610 22084616 chr3R 22084722 22084730 6 114 3.0 3.0 3.0 1.5 120 chr3R 22084610 intergenic not near genes chr3R 22084670 intergenic not near genes chr3R 22084730 intergenic not near genes chr3R_6_22080001 chr3R_22080001 D9 2147 chr3R 22144949 22145003 chr3R 22145136 22145190 33 186 4.0 6.5 5.2 5.3 241 chr3R 22144949 intron SKIP + chr3R 22145070 intron SKIP + chr3R 22145190 intron SKIP + chr3R_33_22145001 chr3R_22145001 D9 2148 chr3R 22153562 22153602 chr3R 22153667 22153707 20 104 7.0 9.0 8.0 2.2 145 chr3R 22153562 intron SKIP + chr3R 22153634 intron SKIP + chr3R 22153707 intron SKIP + chr3R_20_22150001 chr3R_22150001 D9 2149 chr3R 22234061 22234098 chr3R 22234163 22234199 6 101 5.0 7.5 6.2 0.8 138 chr3R 22234061 intron SKIP + chr3R 22234130 intron SKIP + chr3R 22234199 intron SKIP + chr3R_6_22230001 chr3R_22230001 D9 2150 chr3R 22234661 22234712 chr3R 22236005 22236056 pogo 11 1344 1.0 2.0 1.5 4.4 1395 chr3R 22234661 intron SKIP + chr3R 22235358 intron SKIP + chr3R 22236056 intron SKIP + chr3R_11_22235001 chr3R_22235001 D9 2151 chr3R 22239475 22239524 chr3R 22248560 22248597 roo 12 9077 3.5 2.5 3.0 3.0 9122 chr3R 22239475 intron SKIP + chr3R 22244036 intron SKIP + chr3R 22248597 intron SKIP + chr3R_12_22240001 chr3R_22240001 D9 2152 chr3R 22252797 22252845 chr3R 22252926 22252960 23 120 5.5 0.0 2.8 6.1 163 chr3R 22252797 intron SKIP + chr3R 22252878 intron SKIP + chr3R 22252960 intron SKIP + chr3R_23_22250001 chr3R_22250001 D9 2153 chr3R 22253830 22253878 chr3R 22253931 22253979 11 101 2.5 1.5 2.0 3.7 149 chr3R 22253830 intron SKIP + chr3R 22253904 intron SKIP + chr3R 22253979 intron SKIP + chr3R_11_22250001 chr3R_22250001 D9 2154 chr3R 22286123 22286164 chr3R 22286225 22286266 11 102 2.0 5.5 3.8 2.3 143 chr3R 22286123 intron SKIP + chr3R 22286194 intron SKIP + chr3R 22286266 intron SKIP + chr3R_11_22285001 chr3R_22285001 D9 2155 chr3R 22433068 22433095 chr3R 22433193 22433220 7 125 6.0 7.0 6.5 0.9 152 chr3R 22433068 intron CG13847 - chr3R 22433144 intron CG13847 - chr3R 22433220 intron CG13847 - chr3R_7_22430001 chr3R_22430001 D9 2156 chr3R 22437769 22437824 chr3R 22437881 22437939 21 115 1.5 4.0 2.8 5.5 170 chr3R 22437769 intergenic not near genes chr3R 22437854 intergenic not near genes chr3R 22437939 intergenic not near genes chr3R_21_22435001 chr3R_22435001 D9 2157 chr3R 22450524 22450572 chr3R 22453186 22453237 NOF 21 2665 8.5 7.0 7.8 2.4 2713 chr3R 22450524 intron CG34376 + chr3R 22451880 intron CG34376 + chr3R 22453237 intron CG34376 + chr3R_21_22450001 chr3R_22450001 D9 2158 chr3R 22531055 22531107 chr3R 22531164 22531218 28 111 6.0 5.0 5.5 4.3 163 chr3R 22531055 intron CG33093 - chr3R 22531136 exon CG33093 - chr3R 22531218 exon CG33093 - chr3R_28_22530001 chr3R_22530001 D9 2159 chr3R 22538417 22538460 chr3R 22538527 22538568 18 109 10.0 4.5 7.2 2.2 151 chr3R 22538417 intron CG5326 - chr3R 22538492 intron CG5326 - chr3R 22538568 intron CG5326 - chr3R_18_22535001 chr3R_22535001 D9 2160 chr3R 22640681 22640726 chr3R 22640821 22640866 21 139 5.0 3.0 4.0 4.2 185 chr3R 22640681 intron wake + chr3R 22640774 intron wake + chr3R 22640866 intron wake + chr3R_21_22640001 chr3R_22640001 D9 2161 chr3R 22657651 22657695 chr3R 22657754 22657798 6 103 2.0 3.5 2.8 1.6 147 chr3R 22657651 intron wake + chr3R 22657724 intron wake + chr3R 22657798 intron wake + chr3R_6_22655001 chr3R_22655001 D9 2162 chr3R 22672280 22672334 chr3R 22672398 22672452 7 118 1.5 2.5 2.0 2.3 172 chr3R 22672280 intron wake + chr3R 22672366 intron wake + chr3R 22672452 intron wake + chr3R_7_22670001 chr3R_22670001 D9 2163 chr3R 22769066 22769123 chr3R 22769168 22769225 11 102 3.0 4.0 3.5 2.4 159 chr3R 22769066 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769146 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769225 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R_11_22765001 chr3R_22765001 D9 2164 chr3R 22846770 22846801 chr3R 22847016 22847047 12 245 8.0 8.5 8.2 1.3 277 chr3R 22846770 intergenic CG4704 - chr3R 22846908 intergenic not near genes chr3R 22847047 intergenic not near genes chr3R_12_22845001 chr3R_22845001 D9 2165 chr3R 22880579 22880614 chr3R 22880681 22880716 18 102 11.0 11.0 11.0 1.5 137 chr3R 22880579 intergenic not near genes chr3R 22880648 intergenic not near genes chr3R 22880716 intergenic not near genes chr3R_18_22880001 chr3R_22880001 D9 2166 chr3R 22880908 22880957 chr3R 22881071 22881120 13 163 2.5 3.0 2.8 3.4 212 chr3R 22880908 intergenic not near genes chr3R 22881014 intergenic not near genes chr3R 22881120 intergenic not near genes chr3R_13_22880001 chr3R_22880001 D9 2167 chr3R 22888989 22889043 chr3R 22889091 22889145 20 101 5.5 3.5 4.5 3.6 156 chr3R 22888989 intergenic not near genes chr3R 22889067 intergenic not near genes chr3R 22889145 intergenic not near genes chr3R_20_22885001 chr3R_22885001 D9 2168 chr3R 22917967 22917983 chr3R 22918098 22918114 7 131 4.5 11.0 7.8 0.8 147 chr3R 22917967 intron klg + chr3R 22918040 intron klg + chr3R 22918114 intron klg + chr3R_7_22915001 chr3R_22915001 D9 2169 chr3R 22974263 22974309 chr3R 22974369 22974418 11 109 0.0 7.5 3.8 2.3 155 chr3R 22974263 intergenic not near genes chr3R 22974340 intergenic not near genes chr3R 22974418 intergenic not near genes chr3R_11_22970001 chr3R_22970001 D9 2170 chr3R 23064148 23064199 chr3R 23064282 23064333 18 133 4.5 8.0 6.2 2.5 185 chr3R 23064148 exon CG17111 - chr3R 23064240 intron CG17111 - chr3R 23064333 exon CG17111 - chr3R_18_23060001 chr3R_23060001 D9 2171 chr3R 23064867 23064903 chr3R 23064983 23065019 8 116 0.0 6.5 3.2 1.9 152 chr3R 23064867 intron CG17111 - chr3R 23064943 intron CG17111 - chr3R 23065019 intron CG17111 - chr3R_8_23060001 chr3R_23060001 D9 2172 chr3R 23346815 23346869 chr3R 23346918 23346972 7 103 1.0 2.0 1.5 2.8 157 chr3R 23346815 intergenic not near genes chr3R 23346894 intergenic not near genes chr3R 23346972 intergenic not near genes chr3R_7_23345001 chr3R_23345001 D9 2173 chr3R 23452947 23453001 chr3R 23453052 23453106 15 105 9.5 3.5 6.5 2.0 159 chr3R 23452947 intron CG4374 - chr3R 23453026 intron CG4374 - chr3R 23453106 intron CG4374 - chr3R_15_23450001 chr3R_23450001 D9 2174 chr3R 23558388 23558428 chr3R 23560187 23560234 Bari1 12 1805 2.0 3.0 2.5 3.4 1846 chr3R 23558388 intron beat-IV + chr3R 23559311 intron beat-IV + chr3R 23560234 intron beat-IV + chr3R_12_23555001 chr3R_23555001 D9 2175 chr3R 23564418 23564461 chr3R 23564587 23564630 9 169 1.0 2.0 1.5 3.6 212 chr3R 23564418 intron beat-IV + chr3R 23564524 intron beat-IV + chr3R 23564630 intron beat-IV + chr3R_9_23560001 chr3R_23560001 D9 2176 chr3R 23732977 23733007 chr3R 23788177 23788206 4 55199 18.0 22.0 20.0 0.2 55229 chr3R 23732977 intron Rpn9 - chr3R 23760592 5` UTR CG10219 - chr3R 23788206 intron mbc + chr3R_4_23760001 chr3R_23760001 D9 2177 chr3R 23851065 23851081 chr3R 23858755 23858772 opus 5 7691 0.5 3.5 2.0 1.7 7707 chr3R 23851065 3` UTR CG34355 + chr3R 23854918 intergenic not near genes chr3R 23858772 intergenic not near genes chr3R_5_23850001 chr3R_23850001 D9 2178 chr3R 23873958 23873970 chr3R 23874066 23874078 8 107 9.5 20.0 14.8 0.5 120 chr3R 23873958 intron Pli - chr3R 23874018 intron Pli - chr3R 23874078 intron Pli - chr3R_8_23870001 chr3R_23870001 D9 2179 chr3R 23944880 23944934 chr3R 23944989 23945041 20 109 6.0 3.0 4.5 3.6 161 chr3R 23944880 intron CG12268 - chr3R 23944960 intron CG12268 - chr3R 23945041 exon CG12268 - chr3R_20_23940001 chr3R_23940001 D9 2180 chr3R 23949020 23949066 chr3R 23949122 23949168 8 102 2.0 4.5 3.2 1.9 148 chr3R 23949020 intergenic not near genes chr3R 23949094 intergenic not near genes chr3R 23949168 intergenic not near genes chr3R_8_23945001 chr3R_23945001 D9 2181 chr3R 24020797 24020825 chr3R 24021317 24021331 6 518 4.5 0.0 2.2 1.9 534 chr3R 24020797 intron KrT95D - chr3R 24021064 intron KrT95D - chr3R 24021331 intron KrT95D - chr3R_6_24020001 chr3R_24020001 D9 2182 chr3R 24041993 24042018 chr3R 24042131 24042156 6 138 0.0 9.0 4.5 1.1 163 chr3R 24041993 3` UTR spas + chr3R 24042074 3` UTR spas + chr3R 24042156 3` UTR spas + chr3R_6_24040001 chr3R_24040001 D9 2183 chr3R 24072062 24072114 chr3R 24072525 24072572 jockey 10 462 7.5 0.0 3.8 2.1 510 chr3R 24072062 intron 4EHP - chr3R 24072317 intron 4EHP - chr3R 24072572 intron 4EHP - chr3R_10_24070001 chr3R_24070001 D9 2184 chr3R 24076895 24076944 chr3R 24078387 24078436 hobo 22 1492 9.0 5.0 7.0 2.8 1541 chr3R 24076895 intron 4EHP - chr3R 24077666 intron 4EHP - chr3R 24078436 intron 4EHP - chr3R_22_24075001 chr3R_24075001 D9 2185 chr3R 24199713 24199769 chr3R 24199818 24199874 20 105 4.5 7.0 5.8 2.9 161 chr3R 24199713 intron twin - chr3R 24199794 intron twin - chr3R 24199874 intron twin - chr3R_20_24195001 chr3R_24195001 D9 2186 chr3R 24205766 24205814 chr3R 24206291 24206339 19 525 8.5 4.5 6.5 2.5 573 chr3R 24205766 intron twin - chr3R 24206052 intron twin - chr3R 24206339 intron twin - chr3R_19_24205001 chr3R_24205001 D9 2187 chr3R 24207197 24207243 chr3R 24212298 24212344 flea 15 5101 11.0 12.0 11.5 1.2 5147 chr3R 24207197 intron twin - chr3R 24209770 intron twin - chr3R 24212344 intron twin - chr3R_15_24205001 chr3R_24205001 D9 2188 chr3R 21907535 21907536 chr3R 24389465 24389465 8 2481930 26.5 17.5 22.0 0.3 2481930 chr3R 21907535 intergenic CG6678 + chr3R 23148500 intergenic not near genes chr3R 24389465 intron CG5768 - chr3R_8_23145001 chr3R_23145001 D9 2189 chr3R 24527779 24527825 chr3R 24527895 24527941 5 116 2.5 1.5 2.0 1.7 162 chr3R 24527779 intergenic CG13618 +,CG6607 + chr3R 24527860 intergenic CG6607 +,CG13618 + chr3R 24527941 intergenic CG6607 +,CG13618 + chr3R_5_24525001 chr3R_24525001 D9 2190 chr3R 24594653 24594663 chr3R 24594918 24594928 pogo 6 264 2.0 13.0 7.5 0.7 275 chr3R 24594653 intron mld + chr3R 24594790 intron mld + chr3R 24594928 intron mld + chr3R_6_24590001 chr3R_24590001 D9 2191 chr3R 24605548 24605557 chr3R 24605661 24605670 6 113 13.5 22.0 17.8 0.3 122 chr3R 24605548 intron mld + chr3R 24605609 intron mld + chr3R 24605670 intron mld + chr3R_6_24605001 chr3R_24605001 D9 2192 chr3R 24624373 24624383 chr3R 24624487 24624497 7 114 3.0 8.0 5.5 1.1 124 chr3R 24624373 intron Syx18 - chr3R 24624435 intron Syx18 - chr3R 24624497 exon Syx18 - chr3R_7_24620001 chr3R_24620001 D9 2193 chr3R 24667588 24667610 chr3R 24667690 24667712 5 102 5.5 0.0 2.8 1.3 124 chr3R 24667588 intron slo + chr3R 24667650 intron slo + chr3R 24667712 intron slo + chr3R_5_24665001 chr3R_24665001 D9 2194 chr3R 24670137 24670199 chr3R 24670246 24670308 12 109 1.0 4.0 2.5 3.4 171 chr3R 24670137 intron slo + chr3R 24670222 intron slo + chr3R 24670308 intron slo + chr3R_12_24670001 chr3R_24670001 D9 2195 chr3R 24671198 24671253 chr3R 24671300 24671354 15 101 3.5 7.0 5.2 2.4 156 chr3R 24671198 intron slo + chr3R 24671276 intron slo + chr3R 24671354 intron slo + chr3R_15_24670001 chr3R_24670001 D9 2196 chr3R 24725534 24725582 chr3R 24725648 24725696 9 114 5.5 4.0 4.8 1.6 162 chr3R 24725534 intron tok + chr3R 24725615 intron tok + chr3R 24725696 intron tok + chr3R_9_24725001 chr3R_24725001 D9 2197 chr3R 24730076 24730097 chr3R 24732479 24732500 Doc 4 2403 9.0 0.0 4.5 0.7 2424 chr3R 24730076 intron tok + chr3R 24731288 intron tok + chr3R 24732500 intron tok + chr3R_4_24730001 chr3R_24730001 D9 2198 chr3R 24743008 24743063 chr3R 24743118 24743173 13 110 6.0 5.0 5.5 2.0 165 chr3R 24743008 intron tok + chr3R 24743090 intron tok + chr3R 24743173 exon tok + chr3R_13_24740001 chr3R_24740001 D9 2199 chr3R 24888077 24888081 chr3R 24888259 24888263 9 182 30.0 9.0 19.5 0.4 186 chr3R 24888077 intron CG31121 - chr3R 24888170 intron CG31121 - chr3R 24888263 intron CG31121 - chr3R_9_24885001 chr3R_24885001 D9 2200 chr3R 24888084 24888134 chr3R 24888258 24888316 36 181 12.0 8.5 10.2 3.2 232 chr3R 24888084 intron CG31121 - chr3R 24888200 intron CG31121 - chr3R 24888316 intron CG31121 - chr3R_36_24885001 chr3R_24885001 D9 2201 chr3R 24888771 24888812 chr3R 24888936 24888975 6 164 6.5 0.0 3.2 1.4 204 chr3R 24888771 intron CG31121 - chr3R 24888873 intron CG31121 - chr3R 24888975 intron CG31121 - chr3R_6_24885001 chr3R_24885001 D9 2202 chr3R 24893441 24893479 chr3R 24893546 24893584 7 105 2.5 1.5 2.0 2.3 143 chr3R 24893441 intron CG31121 - chr3R 24893512 intron CG31121 - chr3R 24893584 intron CG31121 - chr3R_7_24890001 chr3R_24890001 D9 2203 chr3R 24927107 24927148 chr3R 24931923 24931964 Doc 8 4816 6.0 7.5 6.8 1.0 4857 chr3R 24927107 intergenic Trf4-2 + chr3R 24929536 intergenic not near genes chr3R 24931964 intergenic CG11771 + chr3R_8_24925001 chr3R_24925001 D9 2204 chr3R 24973933 24973979 chr3R 24974034 24974080 19 101 5.5 5.5 5.5 2.9 147 chr3R 24973933 intergenic not near genes chr3R 24974006 intergenic not near genes chr3R 24974080 intergenic not near genes chr3R_19_24970001 chr3R_24970001 D9 2205 chr3R 24974891 24974933 chr3R 24974995 24975037 16 104 4.5 3.0 3.8 3.3 146 chr3R 24974891 intergenic not near genes chr3R 24974964 intergenic not near genes chr3R 24975037 intergenic not near genes chr3R_16_24970001 chr3R_24970001 D9 2206 chr3R 25004877 25004918 chr3R 25004985 25005026 16 108 6.5 5.5 6.0 2.3 149 chr3R 25004877 intron tnc + chr3R 25004952 intron tnc + chr3R 25005026 intron tnc + chr3R_16_25000001 chr3R_25000001 D9 2207 chr3R 25018243 25018290 chr3R 25018337 25018392 28 101 7.0 5.5 6.2 3.9 149 chr3R 25018243 exon tnc + chr3R 25018318 exon tnc + chr3R 25018392 exon tnc + chr3R_28_25015001 chr3R_25015001 D9 2208 chr3R 25053098 25053151 chr3R 25053222 25053261 7 121 0.0 3.5 1.8 2.5 163 chr3R 25053098 intergenic CG11791 +,CG31109 - chr3R 25053180 intergenic CG11791 +,CG31109 - chr3R 25053261 intergenic CG31109 -,CG11791 + chr3R_7_25050001 chr3R_25050001 D9 2209 chr3R 25136380 25136414 chr3R 25136483 25136519 4 104 2.5 1.5 2.0 1.3 139 chr3R 25136380 3` UTR Bili + chr3R 25136450 3` UTR Bili + chr3R 25136519 3` UTR Bili + chr3R_4_25135001 chr3R_25135001 D9 2210 chr3R 25194347 25194365 chr3R 25194448 25194466 4 101 1.5 0.0 0.8 2.2 119 chr3R 25194347 intergenic not near genes chr3R 25194406 intergenic not near genes chr3R 25194466 intergenic not near genes chr3R_4_25190001 chr3R_25190001 D9 2211 chr3R 25209573 25209630 chr3R 25209680 25209737 16 106 1.0 8.5 4.8 2.8 164 chr3R 25209573 intron CG13654 + chr3R 25209655 intron CG13654 + chr3R 25209737 intron CG13654 + chr3R_16_25205001 chr3R_25205001 D9 2212 chr3R 25235803 25235827 chr3R 25235908 25235932 6 105 1.5 1.0 1.2 2.7 129 chr3R 25235803 intergenic CG10420 - chr3R 25235868 intergenic CG10420 - chr3R 25235932 intergenic CG10420 - chr3R_6_25235001 chr3R_25235001 D9 2213 chr3R 25268086 25268092 chr3R 25272650 25272656 4 4564 15.5 24.5 20.0 0.2 4570 chr3R 25268086 intron CR45214 - chr3R 25270371 exon,5` UTR CG11889 +,CG11891 + chr3R 25272656 3` UTR,exon CG11889 +,CG11891 + chr3R_4_25270001 chr3R_25270001 D9 2214 chr3R 25368460 25368480 chr3R 25368603 25368623 6 143 3.0 0.0 1.5 2.4 163 chr3R 25368460 intron Fur1 - chr3R 25368542 intron Fur1 - chr3R 25368623 intron Fur1 - chr3R_6_25365001 chr3R_25365001 D9 2215 chr3R 25422057 25422071 chr3R 25422163 25422176 7 106 6.0 0.0 3.0 1.8 119 chr3R 25422057 intron Fur1 - chr3R 25422116 intron Fur1 - chr3R 25422176 intron Fur1 - chr3R_7_25420001 chr3R_25420001 D9 2216 chr3R 25431405 25431444 chr3R 25431516 25431555 4 111 2.5 1.0 1.8 1.4 150 chr3R 25431405 intron Fur1 - chr3R 25431480 intron Fur1 - chr3R 25431555 intron Fur1 - chr3R_4_25430001 chr3R_25430001 D9 2217 chr3R 25437001 25437045 chr3R 25437110 25437154 11 109 2.5 3.5 3.0 2.8 153 chr3R 25437001 intron Fur1 - chr3R 25437078 intron Fur1 - chr3R 25437154 intron Fur1 - chr3R_11_25435001 chr3R_25435001 D9 2218 chr3R 25689117 25689158 chr3R 25689250 25689291 10 133 5.0 6.0 5.5 1.5 174 chr3R 25689117 intergenic not near genes chr3R 25689204 intergenic not near genes chr3R 25689291 intergenic not near genes chr3R_10_25685001 chr3R_25685001 D9 2219 chr3R 25721898 25721949 chr3R 25722327 25722378 21 429 0.0 3.5 1.8 7.5 480 chr3R 25721898 intron LpR2 - chr3R 25722138 intron LpR2 - chr3R 25722378 intron LpR2 - chr3R_21_25720001 chr3R_25720001 D9 2220 chr3R 25725808 25725859 chr3R 25734993 25735043 roo 7 9185 3.5 2.0 2.8 1.8 9235 chr3R 25725808 intron LpR2 - chr3R 25730426 intron LpR2 - chr3R 25735043 intron LpR2 - chr3R_7_25730001 chr3R_25730001 D9 2221 chr3R 25805347 25805397 chr3R 25805576 25805626 24 229 9.0 1.0 5.0 4.0 279 chr3R 25805347 intergenic not near genes chr3R 25805486 intergenic not near genes chr3R 25805626 intergenic not near genes chr3R_24_25805001 chr3R_25805001 D9 2222 chr3R 25831661 25831667 chr3R 25831763 25831769 4 101 15.5 13.0 14.2 0.3 108 chr3R 25831661 exon Mst57Da - chr3R 25831715 exon Mst57Da - chr3R 25831769 exon Mst57Da - chr3R_4_25830001 chr3R_25830001 D9 2223 chr3R 25832672 25832721 chr3R 25841879 25841922 roo 23 9206 6.5 5.0 5.8 3.4 9250 chr3R 25832672 exon alpha4GT2 + chr3R 25837297 intron alpha4GT2 + chr3R 25841922 exon alpha4GT2 + chr3R_23_25835001 chr3R_25835001 D9 2224 chr3R 25843612 25843659 chr3R 25843767 25843814 11 154 1.0 0.5 0.8 6.1 202 chr3R 25843612 intergenic CR45653 + chr3R 25843713 intergenic CR45653 + chr3R 25843814 intergenic CR45653 + chr3R_11_25840001 chr3R_25840001 D9 2225 chr3R 25885258 25885312 chr3R 25885369 25885423 24 110 4.0 10.0 7.0 3.0 165 chr3R 25885258 5` UTR SppL + chr3R 25885340 intron SppL + chr3R 25885423 5` UTR SppL + chr3R_24_25885001 chr3R_25885001 D9 2226 chr3R 25927512 25927533 chr3R 25927615 25927640 4 106 0.5 2.5 1.5 1.6 128 chr3R 25927512 intron CCAP-R - chr3R 25927576 intron CCAP-R - chr3R 25927640 intron CCAP-R - chr3R_4_25925001 chr3R_25925001 D9 2227 chr3R 26060383 26060430 chr3R 26060494 26060538 20 110 6.5 9.5 8.0 2.2 155 chr3R 26060383 intron CG14544 + chr3R 26060460 intron CG14544 + chr3R 26060538 intron CG14544 + chr3R_20_26060001 chr3R_26060001 D9 2228 chr3R 26071155 26071204 chr3R 26071263 26071312 5 108 4.0 3.0 3.5 1.1 157 chr3R 26071155 3` UTR CR44950 - chr3R 26071234 3` UTR CR44950 - chr3R 26071312 intron CR44950 - chr3R_5_26070001 chr3R_26070001 D9 2229 chr3R 26093820 26093874 chr3R 26093922 26093977 21 102 4.5 4.0 4.2 4.0 157 chr3R 26093820 intron dys - chr3R 26093898 intron dys - chr3R 26093977 intron dys - chr3R_21_26090001 chr3R_26090001 D9 2230 chr3R 26108802 26108818 chr3R 26117409 26117426 Tirant 7 8608 13.5 0.0 6.8 0.9 8624 chr3R 26108802 5` UTR CG31324 + chr3R 26113114 intron CG31324 + chr3R 26117426 intron CG31324 + chr3R_7_26110001 chr3R_26110001 D9 2231 chr3R 26140017 26140024 chr3R 26140118 26140127 5 102 9.0 13.0 11.0 0.4 110 chr3R 26140017 intergenic not near genes chr3R 26140072 intergenic not near genes chr3R 26140127 intergenic not near genes chr3R_5_26140001 chr3R_26140001 D9 2232 chr3R 26284208 26284258 chr3R 26284342 26284390 14 133 3.0 5.5 4.2 2.7 182 chr3R 26284208 intergenic not near genes chr3R 26284299 intergenic not near genes chr3R 26284390 intergenic not near genes chr3R_14_26280001 chr3R_26280001 D9 2233 chr3R 26294708 26294748 chr3R 26294811 26294851 10 103 2.5 4.5 3.5 2.2 143 chr3R 26294708 intergenic not near genes chr3R 26294780 intergenic not near genes chr3R 26294851 intergenic not near genes chr3R_10_26290001 chr3R_26290001 D9 2234 chr3R 26376303 26376341 chr3R 26385486 26385526 roo 14 9184 2.5 0.5 1.5 5.6 9223 chr3R 26376303 intergenic not near genes chr3R 26380914 intergenic not near genes chr3R 26385526 intergenic not near genes chr3R_14_26380001 chr3R_26380001 D9 2235 chr3R 26390442 26390482 chr3R 26390561 26390602 9 119 3.5 5.0 4.2 1.7 160 chr3R 26390442 intergenic not near genes chr3R 26390522 intergenic not near genes chr3R 26390602 intergenic not near genes chr3R_9_26390001 chr3R_26390001 D9 2236 chr3R 26510503 26510526 chr3R 26519581 26519606 roo 7 9079 3.5 2.0 2.8 1.8 9103 chr3R 26510503 intron plum - chr3R 26515054 intron plum - chr3R 26519606 intron,5` UTR plum -,CR45226 + chr3R_7_26515001 chr3R_26515001 D9 2237 chr3R 26542019 26542077 chr3R 26542135 26542193 24 115 4.0 3.5 3.8 5.0 174 chr3R 26542019 intron scrib + chr3R 26542106 intron scrib + chr3R 26542193 intron scrib + chr3R_24_26540001 chr3R_26540001 D9 2238 chr3R 26558299 26558358 chr3R 26565637 26565695 Stalker4 24 7338 5.0 9.5 7.2 2.9 7396 chr3R 26558299 intron scrib + chr3R 26561997 intron scrib + chr3R 26565695 intron scrib + chr3R_24_26560001 chr3R_26560001 D9 2239 chr3R 26574981 26575036 chr3R 26575085 26575140 33 104 10.0 8.0 9.0 3.3 159 chr3R 26574981 exon scrib + chr3R 26575060 intron scrib + chr3R 26575140 intron scrib + chr3R_33_26575001 chr3R_26575001 D9 2240 chr3R 26641611 26641663 chr3R 26641723 26641775 26 111 4.5 7.5 6.0 3.7 164 chr3R 26641611 intergenic not near genes chr3R 26641693 intergenic not near genes chr3R 26641775 intergenic not near genes chr3R_26_26640001 chr3R_26640001 D9 2241 chr3R 26642711 26642754 chr3R 26643129 26643172 jockey 8 418 6.5 2.5 4.5 1.5 461 chr3R 26642711 intergenic not near genes chr3R 26642942 intergenic not near genes chr3R 26643172 intergenic not near genes chr3R_8_26640001 chr3R_26640001 D9 2242 chr3R 26669642 26669691 chr3R 26669749 26669798 9 107 2.5 4.5 3.5 2.0 156 chr3R 26669642 intron beat-VII - chr3R 26669720 intron beat-VII - chr3R 26669798 intron beat-VII - chr3R_9_26665001 chr3R_26665001 D9 2243 chr3R 26727597 26727645 chr3R 26727760 26727808 11 163 4.0 1.5 2.8 2.9 211 chr3R 26727597 intron CG14246 + chr3R 26727702 intron CG14246 + chr3R 26727808 intron CG14246 + chr3R_11_26725001 chr3R_26725001 D9 2244 chr3R 26770219 26770244 chr3R 26770321 26770344 5 102 7.5 3.0 5.2 0.8 125 chr3R 26770219 intergenic CR45563 + chr3R 26770282 intergenic CR45563 + chr3R 26770344 intergenic not near genes chr3R_5_26770001 chr3R_26770001 D9 2245 chr3R 26810528 26810581 chr3R 26811038 26811091 roo 15 510 6.5 7.5 7.0 1.9 563 chr3R 26810528 intron Tl + chr3R 26810810 intron Tl + chr3R 26811091 intron Tl + chr3R_15_26810001 chr3R_26810001 D9 2246 chr3R 26816724 26816760 chr3R 26816842 26816876 14 118 7.5 7.5 7.5 1.6 152 chr3R 26816724 intron Tl + chr3R 26816800 intron Tl + chr3R 26816876 intron Tl + chr3R_14_26815001 chr3R_26815001 D9 2247 chr3R 26845549 26845597 chr3R 26845653 26845702 22 104 10.5 5.0 7.8 2.5 153 chr3R 26845549 intron Lerp - chr3R 26845626 intron Lerp - chr3R 26845702 intron Lerp - chr3R_22_26845001 chr3R_26845001 D9 2248 chr3R 26898213 26898270 chr3R 26898326 26898383 19 113 2.5 3.5 3.0 4.8 170 chr3R 26898213 intron T48 + chr3R 26898298 intron T48 + chr3R 26898383 intron T48 + chr3R_19_26895001 chr3R_26895001 D9 2249 chr3R 26981084 26981103 chr3R 26981194 26981213 6 109 2.5 2.5 2.5 1.7 129 chr3R 26981084 intron CG14253 + chr3R 26981148 intron CG14253 + chr3R 26981213 intron CG14253 + chr3R_6_26980001 chr3R_26980001 D9 2250 chr3R 27007385 27007434 chr3R 27016545 27016594 roo 10 9159 2.5 1.0 1.8 3.6 9209 chr3R 27007385 intron RYa-R + chr3R 27011990 intron RYa-R + chr3R 27016594 intron RYa-R + chr3R_10_27010001 chr3R_27010001 D9 2251 chr3R 27027662 27027703 chr3R 27027771 27027808 5 107 3.0 3.0 3.0 1.2 146 chr3R 27027662 intron RYa-R + chr3R 27027735 intron RYa-R + chr3R 27027808 intron RYa-R + chr3R_5_27025001 chr3R_27025001 D9 2252 chr3R 27028699 27028753 chr3R 27028803 27028857 15 104 3.5 5.0 4.2 2.9 158 chr3R 27028699 intron RYa-R + chr3R 27028778 intron RYa-R + chr3R 27028857 intron RYa-R + chr3R_15_27025001 chr3R_27025001 D9 2253 chr3R 27034518 27034574 chr3R 27035070 27035126 15 552 7.5 3.0 5.2 2.4 608 chr3R 27034518 intron RYa-R + chr3R 27034822 intron RYa-R + chr3R 27035126 intron RYa-R + chr3R_15_27030001 chr3R_27030001 D9 2254 chr3R 27140489 27140545 chr3R 27148124 27148180 412 16 7635 4.5 1.5 3.0 4.0 7691 chr3R 27140489 intron CG6051 - chr3R 27144334 intron CG6051 - chr3R 27148180 intron CG6051 - chr3R_16_27140001 chr3R_27140001 D9 2255 chr3R 27292253 27292308 chr3R 27292390 27292438 34 135 7.0 6.0 6.5 4.5 185 chr3R 27292253 intergenic CG3348 - chr3R 27292346 intergenic CG3348 - chr3R 27292438 intergenic CG3348 - chr3R_34_27290001 chr3R_27290001 D9 2256 chr3R 13073387 13073406 chr3R 27313148 27313150 5 14239753 21.5 41.0 31.2 0.2 14239763 chr3R 13073387 intron sim + chr3R 20193268 intergenic not near genes chr3R 27313150 intron CG3339 - chr3R_5_20190001 chr3R_20190001 D9 2257 chr3R 27315876 27315938 chr3R 27315979 27316054 5 106 3.5 0.0 1.8 1.8 178 chr3R 27315876 intron CG3339 - chr3R 27315965 intron CG3339 - chr3R 27316054 intron CG3339 - chr3R_5_27315001 chr3R_27315001 D9 2258 chr3R 27342770 27342825 chr3R 27351376 27351431 Tirant 14 8606 1.0 2.5 1.8 5.0 8661 chr3R 27342770 intron CG42534 + chr3R 27347100 intron CG42534 + chr3R 27351431 intron CG42534 + chr3R_14_27345001 chr3R_27345001 D9 2259 chr3R 27377445 27377503 chr3R 27377558 27377616 31 113 6.5 6.0 6.2 4.3 171 chr3R 27377445 3` UTR side - chr3R 27377530 3` UTR side - chr3R 27377616 3` UTR side - chr3R_31_27375001 chr3R_27375001 D9 2260 chr3R 27385664 27385715 chr3R 27385960 27386011 16 296 6.0 3.0 4.5 2.9 347 chr3R 27385664 intron side - chr3R 27385838 intron side - chr3R 27386011 intron side - chr3R_16_27385001 chr3R_27385001 D9 2261 chr3R 27706752 27706803 chr3R 27706854 27706905 19 102 5.5 3.0 4.2 3.7 153 chr3R 27706752 intergenic CG12428 -,CG12877 + chr3R 27706828 intergenic CG12428 -,CG12877 + chr3R 27706905 intergenic CG12428 -,CG12877 + chr3R_19_27705001 chr3R_27705001 D9 2262 chr3R 27725545 27725604 chr3R 27731012 27731020 I-element 10 5462 2.5 5.5 4.0 2.0 5475 chr3R 27725545 intergenic not near genes chr3R 27728282 intergenic not near genes chr3R 27731020 intergenic not near genes chr3R_10_27725001 chr3R_27725001 D9 2263 chr3R 27779243 27779287 chr3R 27779348 27779392 26 105 9.0 12.5 10.8 2.2 149 chr3R 27779243 exon CG34353 - chr3R 27779318 intron CG34353 - chr3R 27779392 intron CG34353 - chr3R_26_27775001 chr3R_27775001 D9 2264 chr3R 27799923 27799963 chr3R 27800030 27800069 12 107 4.0 4.0 4.0 2.4 146 chr3R 27799923 intron CG34353 - chr3R 27799996 intron CG34353 - chr3R 27800069 intron CG34353 - chr3R_12_27795001 chr3R_27795001 D9 2265 chr3R 27840253 27840266 chr3R 27840411 27840424 6 158 0.0 5.5 2.8 1.6 171 chr3R 27840253 intron CG34353 - chr3R 27840338 intron CG34353 - chr3R 27840424 intron CG34353 - chr3R_6_27840001 chr3R_27840001 D9 2266 chr3R 27856735 27856786 chr3R 27858243 27858293 hopper2 16 1507 6.0 2.5 4.2 3.1 1558 chr3R 27856735 intron CG34353 - chr3R 27857514 intron CG34353 - chr3R 27858293 intron CG34353 - chr3R_16_27855001 chr3R_27855001 D9 2267 chr3R 27862939 27862986 chr3R 27868269 27868316 Transpac 22 5328 5.5 5.0 5.2 3.5 5377 chr3R 27862939 intron CG34353 - chr3R 27865628 intron CG34353 - chr3R 27868316 intron CG34353 - chr3R_22_27865001 chr3R_27865001 D9 2268 chr3R 27875679 27875725 chr3R 27882759 27882805 297 14 7080 4.0 2.5 3.2 3.3 7126 chr3R 27875679 intron CG34353 - chr3R 27879242 intron CG34353 - chr3R 27882805 intron CG34353 - chr3R_14_27875001 chr3R_27875001 D9 2269 chr3R 28068474 28068518 chr3R 28073941 28073985 I-element 11 5467 0.0 4.5 2.2 3.4 5511 chr3R 28068474 intron CG34362 + chr3R 28071230 intron CG34362 + chr3R 28073985 intron CG34362 + chr3R_11_28070001 chr3R_28070001 D9 2270 chr3R 28076788 28076822 chr3R 28076896 28076930 16 108 4.5 6.0 5.2 2.6 142 chr3R 28076788 intron CG34362 + chr3R 28076859 intron CG34362 + chr3R 28076930 intron CG34362 + chr3R_16_28075001 chr3R_28075001 D9 2271 chr3R 28173647 28173691 chr3R 28181102 28181143 mdg1 15 7454 4.5 3.0 3.8 3.1 7496 chr3R 28173647 intron CG34354 + chr3R 28177395 intron CG34354 + chr3R 28181143 intron CG34354 + chr3R_15_28175001 chr3R_28175001 D9 2272 chr3R 28205005 28205050 chr3R 28205110 28205155 15 105 3.5 1.0 2.2 4.7 150 chr3R 28205005 intron CG34354 + chr3R 28205080 intron CG34354 + chr3R 28205155 intron CG34354 + chr3R_15_28205001 chr3R_28205001 D9 2273 chr3R 28215797 28215848 chr3R 28215896 28215940 24 101 7.0 5.5 6.2 3.3 143 chr3R 28215797 intron CG34354 + chr3R 28215868 intron CG34354 + chr3R 28215940 intron CG34354 + chr3R_24_28215001 chr3R_28215001 D9 2274 chr3R 28253324 28253364 chr3R 28255853 28255899 jockey 12 2534 7.0 4.5 5.8 1.8 2575 chr3R 28253324 intergenic not near genes chr3R 28254612 intergenic not near genes chr3R 28255899 intergenic not near genes chr3R_12_28250001 chr3R_28250001 D9 2275 chr3R 28255935 28255985 chr3R 28256372 28256421 10 437 5.0 2.5 3.8 2.1 486 chr3R 28255935 intergenic not near genes chr3R 28256178 intergenic not near genes chr3R 28256421 intergenic not near genes chr3R_10_28255001 chr3R_28255001 D9 2276 chr3R 28267283 28267304 chr3R 28267390 28267411 7 107 4.0 4.0 4.0 1.4 128 chr3R 28267283 intergenic not near genes chr3R 28267347 intergenic not near genes chr3R 28267411 intergenic not near genes chr3R_7_28265001 chr3R_28265001 D9 2277 chr3R 28282974 28283016 chr3R 28283617 28283668 14 653 4.0 2.0 3.0 3.5 694 chr3R 28282974 exon CG34436 + chr3R 28283321 exon CG34436 + chr3R 28283668 intergenic CG34437 +,CG34436 + chr3R_14_28280001 chr3R_28280001 D9 2278 chr3R 28330276 28330323 chr3R 28330544 28330591 9 268 1.5 2.0 1.8 3.2 315 chr3R 28330276 intron larp - chr3R 28330434 intron larp - chr3R 28330591 intron larp - chr3R_9_28330001 chr3R_28330001 D9 2279 chr3R 28331503 28331523 chr3R 28331607 28331625 4 104 1.0 2.0 1.5 1.6 122 chr3R 28331503 intron larp - chr3R 28331564 intron larp - chr3R 28331625 intron larp - chr3R_4_28330001 chr3R_28330001 D9 2280 chr3R 28352487 28352542 chr3R 28352851 28352907 30 365 5.5 8.5 7.0 3.8 420 chr3R 28352487 exon Or98b + chr3R 28352697 exon Or98b + chr3R 28352907 exon Or98b + chr3R_30_28350001 chr3R_28350001 D9 2281 chr3R 28377768 28377777 chr3R 28378199 28378207 4 430 0.0 8.5 4.2 0.8 439 chr3R 28377768 intergenic not near genes chr3R 28377988 intergenic not near genes chr3R 28378207 intergenic not near genes chr3R_4_28375001 chr3R_28375001 D9 2282 chr3R 28393682 28393720 chr3R 28393805 28393845 9 124 5.0 2.5 3.8 1.9 163 chr3R 28393682 intergenic not near genes chr3R 28393764 intergenic not near genes chr3R 28393845 intergenic not near genes chr3R_9_28390001 chr3R_28390001 D9 2283 chr3R 28407689 28407732 chr3R 28407800 28407840 22 111 7.5 5.5 6.5 2.9 151 chr3R 28407689 intergenic not near genes chr3R 28407764 intergenic not near genes chr3R 28407840 intergenic not near genes chr3R_22_28405001 chr3R_28405001 D9 2284 chr3R 28416875 28416930 chr3R 28417068 28417122 24 193 7.5 6.0 6.8 3.1 247 chr3R 28416875 intergenic not near genes chr3R 28416998 intergenic not near genes chr3R 28417122 intergenic not near genes chr3R_24_28415001 chr3R_28415001 D9 2285 chr3R 28424055 28424110 chr3R 28424218 28424273 13 163 3.5 6.5 5.0 2.2 218 chr3R 28424055 intron beat-VI + chr3R 28424164 intron beat-VI + chr3R 28424273 intron beat-VI + chr3R_13_28420001 chr3R_28420001 D9 2286 chr3R 28442160 28442197 chr3R 28445681 28445718 13 3520 8.0 12.0 10.0 1.2 3558 chr3R 28442160 intron beat-VI + chr3R 28443939 intron beat-VI + chr3R 28445718 intron beat-VI + chr3R_13_28440001 chr3R_28440001 D9 2287 chr3R 28469044 28469092 chr3R 28469148 28469196 26 104 7.0 7.5 7.2 3.2 152 chr3R 28469044 intron beat-VI + chr3R 28469120 intron beat-VI + chr3R 28469196 intron beat-VI + chr3R_26_28465001 chr3R_28465001 D9 2288 chr3R 28485028 28485077 chr3R 28485130 28485179 16 99 2.0 4.5 3.2 3.8 151 chr3R 28485028 exon CG1894 + chr3R 28485104 exon CG1894 + chr3R 28485179 exon CG1894 + chr3R_16_28485001 chr3R_28485001 D9 2289 chr3R 28546943 28546987 chr3R 28547074 28547117 10 130 5.0 2.5 3.8 2.1 174 chr3R 28546943 intergenic not near genes chr3R 28547030 intergenic not near genes chr3R 28547117 intergenic not near genes chr3R_10_28545001 chr3R_28545001 D9 2290 chr3R 28578438 28578490 chr3R 28578543 28578593 10 104 5.5 5.0 5.2 1.6 155 chr3R 28578438 intergenic not near genes chr3R 28578516 intergenic not near genes chr3R 28578593 intergenic not near genes chr3R_10_28575001 chr3R_28575001 D9 2291 chr3R 28594082 28594130 chr3R 28594183 28594234 11 102 4.5 6.0 5.2 1.8 152 chr3R 28594082 5` UTR CR43440 + chr3R 28594158 5` UTR CR43440 + chr3R 28594234 5` UTR CR43440 + chr3R_11_28590001 chr3R_28590001 D9 2292 chr3R 28626172 28626221 chr3R 28626297 28626346 16 123 5.0 5.0 5.0 2.7 174 chr3R 28626172 intron CG10011 - chr3R 28626259 intron CG10011 - chr3R 28626346 intron CG10011 - chr3R_16_28625001 chr3R_28625001 D9 2293 chr3R 28632889 28632946 chr3R 28632991 28633048 28 102 8.5 7.0 7.8 3.2 159 chr3R 28632889 intron CG10011 - chr3R 28632968 intron CG10011 - chr3R 28633048 intron CG10011 - chr3R_28_28630001 chr3R_28630001 D9 2294 chr3R 28792846 28792895 chr3R 28797966 28798015 jockey 22 5120 4.5 3.5 4.0 4.4 5169 chr3R 28792846 intergenic not near genes chr3R 28795430 intergenic not near genes chr3R 28798015 intergenic not near genes chr3R_22_28795001 chr3R_28795001 D9 2295 chr3R 21907534 21907536 chr3R 28831799 28831802 80 6924267 26.5 28.0 27.2 2.8 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_80_25365001 chr3R_25365001 D9 2296 chr3R 28860207 28860260 chr3R 28860309 28860362 33 102 6.5 8.5 7.5 3.9 155 chr3R 28860207 intron spg + chr3R 28860284 intron spg + chr3R 28860362 intron spg + chr3R_33_28860001 chr3R_28860001 D9 2297 chr3R 28955312 28955362 chr3R 28955480 28955530 8 168 3.0 3.5 3.2 1.9 218 chr3R 28955312 intron CG14521 - chr3R 28955421 intron CG14521 - chr3R 28955530 intron CG14521 - chr3R_8_28955001 chr3R_28955001 D9 2298 chr3R 28960496 28960543 chr3R 28960606 28960653 8 110 1.0 5.0 3.0 2.0 157 chr3R 28960496 intron CG14521 - chr3R 28960574 intron CG14521 - chr3R 28960653 intron CG14521 - chr3R_8_28960001 chr3R_28960001 D9 2299 chr3R 28985046 28985087 chr3R 28985171 28985216 6 127 1.5 4.5 3.0 1.5 170 chr3R 28985046 intergenic not near genes chr3R 28985131 intergenic not near genes chr3R 28985216 intergenic not near genes chr3R_6_28985001 chr3R_28985001 D9 2300 chr3R 28989882 28989930 chr3R 28990080 28990130 24 199 7.0 8.0 7.5 2.8 248 chr3R 28989882 intergenic not near genes chr3R 28990006 intergenic not near genes chr3R 28990130 intergenic not near genes chr3R_24_28990001 chr3R_28990001 D9 2301 chr3R 29048401 29048428 chr3R 29048572 29048597 7 170 9.5 4.0 6.8 0.9 196 chr3R 29048401 3` UTR Pkc98E + chr3R 29048499 3` UTR Pkc98E + chr3R 29048597 3` UTR Pkc98E + chr3R_7_29045001 chr3R_29045001 D9 2302 chr3R 29054244 29054295 chr3R 29054364 29054415 10 120 1.0 4.5 2.8 2.6 171 chr3R 29054244 intergenic CG11843 +,CG11842 + chr3R 29054330 intergenic CG11843 +,CG11842 + chr3R 29054415 5` UTR CG11843 + chr3R_10_29050001 chr3R_29050001 D9 2303 chr3R 29079383 29079408 chr3R 29080780 29080805 NOF 9 1397 2.5 3.5 3.0 2.2 1422 chr3R 29079383 intron CG11873 + chr3R 29080094 intron CG11873 + chr3R 29080805 intron CG11873 + chr3R_9_29080001 chr3R_29080001 D9 2304 chr3R 29091410 29091437 chr3R 29091521 29091546 9 109 4.5 7.5 6.0 1.3 136 chr3R 29091410 intron CG11873 + chr3R 29091478 intron CG11873 + chr3R 29091546 intron CG11873 + chr3R_9_29090001 chr3R_29090001 D9 2305 chr3R 29203824 29203846 chr3R 29203929 29203951 6 105 7.5 0.0 3.8 1.2 127 chr3R 29203824 5` UTR CG14508 - chr3R 29203888 intron CG14508 - chr3R 29203951 intron CG14508 - chr3R_6_29200001 chr3R_29200001 D9 2306 chr3R 29237232 29237277 chr3R 29239278 29239321 15 2045 46.0 11.5 28.8 0.5 2089 chr3R 29237232 exon CG11951 - chr3R 29238276 intron CG11951 - chr3R 29239321 exon CG31427 - chr3R_15_29235001 chr3R_29235001 D9 2307 chr3R 29239204 29239250 chr3R 29245520 29245566 8 6316 10.0 46.5 28.2 0.3 6362 chr3R 29239204 exon CG31427 - chr3R 29242385 exon CG31445 - chr3R 29245566 exon SP1029 - chr3R_8_29240001 chr3R_29240001 D9 2308 chr3R 29253885 29253915 chr3R 29254873 29254904 12 988 51.5 19.0 35.2 0.3 1019 chr3R 29253885 exon stg - chr3R 29254394 intron stg - chr3R 29254904 exon stg - chr3R_12_29250001 chr3R_29250001 D9 2309 chr3R 29282786 29282819 chr3R 29282895 29282928 14 110 5.5 10.0 7.8 1.6 142 chr3R 29282786 intergenic not near genes chr3R 29282857 intergenic not near genes chr3R 29282928 intergenic not near genes chr3R_14_29280001 chr3R_29280001 D9 2310 chr3R 29294885 29294934 chr3R 29294987 29295036 25 102 11.5 13.0 12.2 1.9 151 chr3R 29294885 3` UTR CG14506 - chr3R 29294960 3` UTR CG14506 - chr3R 29295036 3` UTR CG14506 - chr3R_25_29290001 chr3R_29290001 D9 2311 chr3R 29319807 29319855 chr3R 29320151 29320199 jockey 13 344 4.0 3.0 3.5 2.9 392 chr3R 29319807 intergenic Cnx99A - chr3R 29320003 intergenic Cnx99A - chr3R 29320199 intergenic not near genes chr3R_13_29320001 chr3R_29320001 D9 2312 chr3R 29356032 29356074 chr3R 29356136 29356172 5 102 4.5 2.5 3.5 1.1 140 chr3R 29356032 intergenic CR45547 - chr3R 29356102 intergenic CR45547 - chr3R 29356172 3` UTR CR45547 - chr3R_5_29355001 chr3R_29355001 D9 2313 chr3R 29365366 29365394 chr3R 29365473 29365500 6 107 10.0 3.0 6.5 0.8 134 chr3R 29365366 intergenic not near genes chr3R 29365433 intergenic not near genes chr3R 29365500 intergenic not near genes chr3R_6_29365001 chr3R_29365001 D9 2314 chr3R 29376337 29376357 chr3R 29376450 29376470 4 113 3.0 0.0 1.5 1.6 133 chr3R 29376337 intergenic not near genes chr3R 29376404 intergenic not near genes chr3R 29376470 intergenic not near genes chr3R_4_29375001 chr3R_29375001 D9 2315 chr3R 29406609 29406644 chr3R 29407920 29407936 jockey 17 1310 6.5 10.0 8.2 1.8 1327 chr3R 29406609 intron Ptp99A + chr3R 29407272 intron Ptp99A + chr3R 29407936 intron Ptp99A + chr3R_17_29405001 chr3R_29405001 D9 2316 chr3R 29446969 29447023 chr3R 29447081 29447135 22 112 4.0 5.0 4.5 4.0 166 chr3R 29446969 intron Ptp99A + chr3R 29447052 intron Ptp99A + chr3R 29447135 intron Ptp99A + chr3R_22_29445001 chr3R_29445001 D9 2317 chr3R 29449352 29449389 chr3R 29449455 29449492 5 103 3.0 3.5 3.2 1.2 140 chr3R 29449352 intron Ptp99A + chr3R 29449422 intron Ptp99A + chr3R 29449492 intron Ptp99A + chr3R_5_29445001 chr3R_29445001 D9 2318 chr3R 29452594 29452632 chr3R 29452718 29452756 20 124 3.0 2.5 2.8 5.3 162 chr3R 29452594 intron Ptp99A + chr3R 29452675 intron Ptp99A + chr3R 29452756 intron Ptp99A + chr3R_20_29450001 chr3R_29450001 D9 2319 chr3R 29474421 29474459 chr3R 29474533 29474569 10 112 5.0 4.0 4.5 1.8 148 chr3R 29474421 intron Ptp99A + chr3R 29474495 intron Ptp99A + chr3R 29474569 intron Ptp99A + chr3R_10_29470001 chr3R_29470001 D9 2320 chr3R 29505872 29505926 chr3R 29505974 29506028 11 102 1.5 4.5 3.0 2.8 156 chr3R 29505872 intergenic not near genes chr3R 29505950 intergenic not near genes chr3R 29506028 intergenic not near genes chr3R_11_29505001 chr3R_29505001 D9 2321 chr3R 29539406 29539437 chr3R 29539507 29539538 9 101 10.0 0.0 5.0 1.5 132 chr3R 29539406 intergenic not near genes chr3R 29539472 intergenic not near genes chr3R 29539538 intergenic not near genes chr3R_9_29535001 chr3R_29535001 D9 2322 chr3R 29566363 29566403 chr3R 29566465 29566505 8 102 5.0 3.5 4.2 1.5 142 chr3R 29566363 intergenic not near genes chr3R 29566434 intergenic not near genes chr3R 29566505 intergenic not near genes chr3R_8_29565001 chr3R_29565001 D9 2323 chr3R 29590349 29590404 chr3R 29590467 29590522 34 118 7.0 8.5 7.8 3.9 173 chr3R 29590349 exon CG31041 - chr3R 29590436 intron CG31041 - chr3R 29590522 exon CG31041 - chr3R_34_29590001 chr3R_29590001 D9 2324 chr3R 29621245 29621263 chr3R 29621347 29621365 8 102 7.0 0.5 3.8 1.7 120 chr3R 29621245 intergenic CG1907 + chr3R 29621305 intergenic not near genes chr3R 29621365 intergenic not near genes chr3R_8_29620001 chr3R_29620001 D9 2325 chr3R 29627259 29627314 chr3R 29627696 29627749 17 436 1.5 4.0 2.8 4.5 490 chr3R 29627259 intergenic not near genes chr3R 29627504 intergenic not near genes chr3R 29627749 intergenic not near genes chr3R_17_29625001 chr3R_29625001 D9 2326 chr3R 29648990 29649013 chr3R 29649105 29649128 4 115 5.0 6.5 5.8 0.6 138 chr3R 29648990 intron Dop1R2 - chr3R 29649059 intron Dop1R2 - chr3R 29649128 intron Dop1R2 - chr3R_4_29645001 chr3R_29645001 D9 2327 chr3R 29655629 29655672 chr3R 29655730 29655774 8 103 4.5 1.5 3.0 2.0 145 chr3R 29655629 intron Dop1R2 - chr3R 29655702 intron Dop1R2 - chr3R 29655774 intron Dop1R2 - chr3R_8_29655001 chr3R_29655001 D9 2328 chr3R 29669687 29669732 chr3R 29670141 29670186 24 454 5.5 8.0 6.8 3.1 499 chr3R 29669687 exon ppk30 + chr3R 29669936 exon ppk30 + chr3R 29670186 intron ppk30 + chr3R_24_29665001 chr3R_29665001 D9 2329 chr3R 29738248 29738275 chr3R 29739740 29739767 hobo 6 1491 7.5 5.0 6.2 0.8 1519 chr3R 29738248 intergenic CG1969 +,CG7598 + chr3R 29739008 intron CG1969 + chr3R 29739767 5` UTR CG1969 + chr3R_6_29735001 chr3R_29735001 D9 2330 chr3R 29758916 29758963 chr3R 29759019 29759066 17 103 6.5 6.0 6.2 2.4 150 chr3R 29758916 3` UTR CR44953 - chr3R 29758991 3` UTR CR44953 - chr3R 29759066 intergenic CR44953 - chr3R_17_29755001 chr3R_29755001 D9 2331 chr3R 29760353 29760388 chr3R 29761579 29761614 pogo 7 1226 2.0 0.0 1.0 3.5 1261 chr3R 29760353 intergenic not near genes chr3R 29760984 intergenic not near genes chr3R 29761614 intergenic not near genes chr3R_7_29760001 chr3R_29760001 D9 2332 chr3R 29854814 29854854 chr3R 29854916 29854959 10 104 3.0 3.5 3.2 2.4 145 chr3R 29854814 3` UTR dgt1 - chr3R 29854886 exon dgt1 - chr3R 29854959 exon dgt1 - chr3R_10_29850001 chr3R_29850001 D9 2333 chr3R 29881999 29882051 chr3R 29891181 29891233 roo 12 9182 6.0 5.0 5.5 1.8 9234 chr3R 29881999 intron CG31038 + chr3R 29886616 intron CG31038 + chr3R 29891233 intron CG31038 + chr3R_12_29885001 chr3R_29885001 D9 2334 chr3R 29900124 29900160 chr3R 29900230 29900266 16 105 11.0 9.5 10.2 1.4 142 chr3R 29900124 intron CG31038 + chr3R 29900195 intron CG31038 + chr3R 29900266 intron CG31038 + chr3R_16_29900001 chr3R_29900001 D9 2335 chr3R 29950553 29950594 chr3R 29950655 29950693 16 100 3.0 7.0 5.0 2.7 140 chr3R 29950553 intergenic TkR99D - chr3R 29950623 intergenic TkR99D - chr3R 29950693 intergenic TkR99D - chr3R_16_29950001 chr3R_29950001 D9 2336 chr3R 29966034 29966072 chr3R 29966139 29966174 10 103 12.5 12.0 12.2 0.8 140 chr3R 29966034 intron TkR99D - chr3R 29966104 intron TkR99D - chr3R 29966174 intron TkR99D - chr3R_10_29965001 chr3R_29965001 D9 2337 chr3R 30013357 30013396 chr3R 30013480 30013519 12 123 7.0 4.5 5.8 1.8 162 chr3R 30013357 intron CG7920 - chr3R 30013438 intron CG7920 - chr3R 30013519 intron CG7920 - chr3R_12_30010001 chr3R_30010001 D9 2338 chr3R 30084848 30084877 chr3R 30086340 30086366 hobo 17 1491 0.5 7.5 4.0 3.4 1518 chr3R 30084848 intron sima + chr3R 30085607 intron sima + chr3R 30086366 intron sima + chr3R_17_30085001 chr3R_30085001 D9 2339 chr3R 30124935 30124980 chr3R 30125036 30125079 25 100 7.5 4.0 5.8 3.7 144 chr3R 30124935 intergenic CG45073 - chr3R 30125007 intergenic CG45073 - chr3R 30125079 intergenic CG45073 - chr3R_25_30125001 chr3R_30125001 D9 2340 chr3R 30136925 30136982 chr3R 30137029 30137086 26 104 5.5 6.0 5.8 3.8 161 chr3R 30136925 exon AdoR - chr3R 30137006 intron AdoR - chr3R 30137086 exon AdoR - chr3R_26_30135001 chr3R_30135001 D9 2341 chr3R 30238734 30238773 chr3R 30239923 30239959 1360 4 1189 5.5 0.0 2.8 1.1 1225 chr3R 30238734 intergenic not near genes chr3R 30239346 intergenic not near genes chr3R 30239959 intergenic not near genes chr3R_4_30235001 chr3R_30235001 D9 2342 chr3R 30271039 30271047 chr3R 30271150 30271158 7 110 12.5 6.0 9.2 0.7 119 chr3R 30271039 intergenic not near genes chr3R 30271098 intergenic not near genes chr3R 30271158 intergenic not near genes chr3R_7_30270001 chr3R_30270001 D9 2343 chr3R 30317310 30317344 chr3R 30324918 30324961 roo 4 7615 3.5 3.5 3.5 0.9 7651 chr3R 30317310 intron hdc + chr3R 30321136 intron hdc + chr3R 30324961 intron hdc + chr3R_4_30320001 chr3R_30320001 D9 2344 chr3R 30351399 30351434 chr3R 30351502 30351537 13 102 6.5 6.5 6.5 1.7 138 chr3R 30351399 intron hdc + chr3R 30351468 intron hdc + chr3R 30351537 intron hdc + chr3R_13_30350001 chr3R_30350001 D9 2345 chr3R 30375520 30375569 chr3R 30383168 30383217 412 7 7648 3.5 3.5 3.5 1.6 7697 chr3R 30375520 intergenic not near genes chr3R 30379368 intergenic not near genes chr3R 30383217 intergenic not near genes chr3R_7_30375001 chr3R_30375001 D9 2346 chr3R 30396195 30396240 chr3R 30404486 30404531 roo 17 8291 3.5 5.0 4.2 3.3 8336 chr3R 30396195 intergenic not near genes chr3R 30400363 intergenic not near genes chr3R 30404531 5` UTR CR45570 + chr3R_17_30400001 chr3R_30400001 D9 2347 chr3R 30456390 30456404 chr3R 30456485 30456507 5 103 2.0 3.5 2.8 1.3 117 chr3R 30456390 intergenic CG2224 - chr3R 30456448 3` UTR CG2224 - chr3R 30456507 3` UTR CG2224 - chr3R_5_30455001 chr3R_30455001 D9 2348 chr3R 30457992 30458039 chr3R 30458097 30458144 17 104 4.5 5.0 4.8 2.9 152 chr3R 30457992 intron CG2224 - chr3R 30458068 intron CG2224 - chr3R 30458144 intron CG2224 - chr3R_17_30455001 chr3R_30455001 D9 2349 chr3R 30480454 30480509 chr3R 30482945 30483002 jockey 28 2491 6.0 3.0 4.5 5.1 2548 chr3R 30480454 intron PH4alphaEFB + chr3R 30481728 intron PH4alphaEFB + chr3R 30483002 intron PH4alphaEFB + chr3R_28_30480001 chr3R_30480001 D9 2350 chr3R 30488108 30488112 chr3R 30488212 30488216 4 104 1.5 0.5 1.0 2.0 108 chr3R 30488108 intergenic Jon99Fii - chr3R 30488162 intergenic Jon99Fii - chr3R 30488216 intergenic Jon99Fii - chr3R_4_30485001 chr3R_30485001 D9 2351 chr3R 30498401 30498432 chr3R 30498626 30498657 7 225 0.0 13.0 6.5 0.9 256 chr3R 30498401 intron PH4alphaNE1 - chr3R 30498529 intron PH4alphaNE1 - chr3R 30498657 intron PH4alphaNE1 - chr3R_7_30495001 chr3R_30495001 D9 2352 chr3R 30544727 30544754 chr3R 30544835 30544869 7 115 5.5 7.0 6.2 1.0 142 chr3R 30544727 intron tmod + chr3R 30544798 intron tmod + chr3R 30544869 intron tmod + chr3R_7_30540001 chr3R_30540001 D9 2353 chr3R 30571680 30571716 chr3R 30571785 30571821 7 105 1.5 3.5 2.5 2.0 141 chr3R 30571680 intron tmod + chr3R 30571750 intron tmod + chr3R 30571821 exon tmod + chr3R_7_30570001 chr3R_30570001 D9 2354 chr3R 30591287 30591340 chr3R 30591406 30591452 11 114 0.0 3.0 1.5 4.4 165 chr3R 30591287 intergenic not near genes chr3R 30591370 intergenic not near genes chr3R 30591452 intergenic not near genes chr3R_11_30590001 chr3R_30590001 D9 2355 chr3R 30627586 30627635 chr3R 30627691 30627740 23 104 6.0 6.5 6.2 3.2 154 chr3R 30627586 3` UTR CG2267 - chr3R 30627663 exon CG2267 - chr3R 30627740 exon CG2267 - chr3R_23_30625001 chr3R_30625001 D9 2356 chr3R 30677865 30677874 chr3R 30677995 30678007 6 132 7.0 10.0 8.5 0.6 142 chr3R 30677865 intergenic not near genes chr3R 30677936 intergenic not near genes chr3R 30678007 intergenic not near genes chr3R_6_30675001 chr3R_30675001 D9 2357 chr3R 30679493 30679551 chr3R 30686987 30687045 blood 10 7494 2.0 4.0 3.0 2.5 7552 chr3R 30679493 intergenic not near genes chr3R 30683269 intergenic not near genes chr3R 30687045 intergenic not near genes chr3R_10_30680001 chr3R_30680001 D9 2358 chr3R 30700845 30700877 chr3R 30700991 30701025 11 148 3.5 0.0 1.8 3.9 180 chr3R 30700845 intergenic not near genes chr3R 30700935 intergenic not near genes chr3R 30701025 intergenic not near genes chr3R_11_30700001 chr3R_30700001 D9 2359 chr3R 30755598 30755650 chr3R 30755708 30755760 16 110 4.0 5.5 4.8 2.8 162 chr3R 30755598 intergenic not near genes chr3R 30755679 intergenic not near genes chr3R 30755760 intergenic not near genes chr3R_16_30755001 chr3R_30755001 D9 2360 chr3R 30818786 30818822 chr3R 30820376 30820410 1360 9 1589 5.0 4.0 4.5 1.6 1624 chr3R 30818786 intron cindr + chr3R 30819598 intron cindr + chr3R 30820410 intron cindr + chr3R_9_30815001 chr3R_30815001 D9 2361 chr3R 30823385 30823409 chr3R 30823506 30823528 5 121 3.0 3.0 3.0 1.2 143 chr3R 30823385 intron cindr + chr3R 30823456 intron cindr + chr3R 30823528 intron cindr + chr3R_5_30820001 chr3R_30820001 D9 2362 chr3R 30831690 30831697 chr3R 30831791 30831798 4 100 4.0 8.5 6.2 0.6 108 chr3R 30831690 intron CG15544 + chr3R 30831744 intron CG15544 + chr3R 30831798 intron CG15544 + chr3R_4_30830001 chr3R_30830001 D9 2363 chr3R 30842810 30842865 chr3R 30842924 30842980 33 114 6.0 3.5 4.8 5.7 170 chr3R 30842810 intergenic not near genes chr3R 30842895 intergenic not near genes chr3R 30842980 intergenic not near genes chr3R_33_30840001 chr3R_30840001 D9 2364 chr3R 30859379 30859401 chr3R 30859483 30859505 5 104 0.5 2.0 1.2 2.3 126 chr3R 30859379 intergenic not near genes chr3R 30859442 intergenic not near genes chr3R 30859505 intergenic not near genes chr3R_5_30855001 chr3R_30855001 D9 2365 chr3R 30982572 30982622 chr3R 30982689 30982739 21 117 4.5 7.0 5.8 3.1 167 chr3R 30982572 intron 5-HT7 - chr3R 30982656 intron 5-HT7 - chr3R 30982739 intron 5-HT7 - chr3R_21_30980001 chr3R_30980001 D9 2366 chr3R 30996619 30996667 chr3R 30996868 30996916 15 249 2.0 8.0 5.0 2.5 297 chr3R 30996619 intron 5-HT7 - chr3R 30996768 intron 5-HT7 - chr3R 30996916 intron 5-HT7 - chr3R_15_30995001 chr3R_30995001 D9 2367 chr3R 31042084 31042143 chr3R 31042196 31042255 25 112 5.0 4.5 4.8 4.3 171 chr3R 31042084 intron CanA1 + chr3R 31042170 intron CanA1 + chr3R 31042255 intron CanA1 + chr3R_25_31040001 chr3R_31040001 D9 2368 chr3R 31055501 31055510 chr3R 31055625 31055636 5 126 8.0 7.0 7.5 0.6 135 chr3R 31055501 3` UTR dco - chr3R 31055568 3` UTR dco - chr3R 31055636 3` UTR dco - chr3R_5_31055001 chr3R_31055001 D9 2369 chr3R 31074205 31074256 chr3R 31081828 31081885 springer 11 7625 9.0 0.0 4.5 2.0 7680 chr3R 31074205 intron Sox100B + chr3R 31078045 intron Sox100B + chr3R 31081885 intron Sox100B + chr3R_11_31075001 chr3R_31075001 D9 2370 chr3R 31087076 31087128 chr3R 31087613 31087665 34 536 8.5 4.5 6.5 4.5 589 chr3R 31087076 intergenic not near genes chr3R 31087370 intergenic not near genes chr3R 31087665 intergenic not near genes chr3R_34_31085001 chr3R_31085001 D9 2371 chr3R 31146725 31146776 chr3R 31146828 31146879 14 103 4.5 1.0 2.8 3.7 154 chr3R 31146725 intron Gycbeta100B + chr3R 31146802 intron Gycbeta100B + chr3R 31146879 intron Gycbeta100B + chr3R_14_31145001 chr3R_31145001 D9 2372 chr3R 31164524 31164581 chr3R 31164642 31164699 16 118 2.5 2.0 2.2 5.0 175 chr3R 31164524 intron,intron Gycbeta100B +,stops - chr3R 31164612 intron,intron Gycbeta100B +,stops - chr3R 31164699 intron,intron Gycbeta100B +,stops - chr3R_16_31160001 chr3R_31160001 D9 2373 chr3R 31187997 31188055 chr3R 31188124 31188182 27 126 2.0 6.0 4.0 5.4 185 chr3R 31187997 intron mesh - chr3R 31188090 intron mesh - chr3R 31188182 intron mesh - chr3R_27_31185001 chr3R_31185001 D9 2374 chr3R 31263797 31263831 chr3R 31263908 31263942 13 111 5.0 3.5 4.2 2.5 145 chr3R 31263797 exon CG18673 + chr3R 31263870 3` UTR CG18673 + chr3R 31263942 intergenic CG18673 + chr3R_13_31260001 chr3R_31260001 D9 2375 chr3R 31275944 31275991 chr3R 31276076 31276122 18 131 1.5 6.0 3.8 3.8 178 chr3R 31275944 intergenic not near genes chr3R 31276033 intergenic not near genes chr3R 31276122 intergenic not near genes chr3R_18_31275001 chr3R_31275001 D9 2376 chr3R 31279355 31279400 chr3R 31285571 31285616 diver 10 6216 6.5 8.5 7.5 1.2 6261 chr3R 31279355 intergenic not near genes chr3R 31282486 intergenic not near genes chr3R 31285616 intergenic not near genes chr3R_10_31280001 chr3R_31280001 D9 2377 chr3R 31330399 31330409 chr3R 31335637 31335649 copia 9 5239 16.5 9.0 12.8 0.7 5250 chr3R 31330399 intron CG34347 + chr3R 31333024 intron CG34347 + chr3R 31335649 intron CG34347 + chr3R_9_31330001 chr3R_31330001 D9 2378 chr3R 31412684 31412740 chr3R 31412802 31412858 22 118 4.5 5.0 4.8 3.8 174 chr3R 31412684 intron Gprk2 + chr3R 31412771 intron Gprk2 + chr3R 31412858 intron Gprk2 + chr3R_22_31410001 chr3R_31410001 D9 2379 chr3R 31413075 31413099 chr3R 31418300 31418315 copia 8 5224 14.0 0.0 7.0 1.0 5240 chr3R 31413075 intron Gprk2 + chr3R 31415695 intron Gprk2 + chr3R 31418315 intron Gprk2 + chr3R_8_31415001 chr3R_31415001 D9 2380 chr3R 31435340 31435381 chr3R 31435517 31435558 12 177 4.0 8.0 6.0 1.7 218 chr3R 31435340 intron Gprk2 + chr3R 31435449 intron Gprk2 + chr3R 31435558 intron Gprk2 + chr3R_12_31435001 chr3R_31435001 D9 2381 chr3R 31453199 31453238 chr3R 31453302 31453341 11 102 7.0 8.5 7.8 1.2 142 chr3R 31453199 intron Gprk2 + chr3R 31453270 intron Gprk2 + chr3R 31453341 exon Gprk2 + chr3R_11_31450001 chr3R_31450001 D9 2382 chr3R 31534578 31534633 chr3R 31534682 31534737 17 104 3.0 1.5 2.2 5.3 159 chr3R 31534578 intergenic not near genes chr3R 31534658 intergenic not near genes chr3R 31534737 intergenic not near genes chr3R_17_31530001 chr3R_31530001 D9 2383 chr3R 31539333 31539352 chr3R 31539443 31539462 5 110 1.5 7.0 4.2 1.0 129 chr3R 31539333 intergenic not near genes chr3R 31539398 intergenic not near genes chr3R 31539462 intergenic not near genes chr3R_5_31535001 chr3R_31535001 D9 2384 chr3R 31610107 31610135 chr3R 31610218 31610246 10 111 3.5 4.5 4.0 2.0 139 chr3R 31610107 intron CycG - chr3R 31610176 intron CycG - chr3R 31610246 intron CycG - chr3R_10_31610001 chr3R_31610001 D9 2385 chr3R 31615136 31615186 chr3R 31615337 31615387 15 198 6.5 4.0 5.2 2.4 251 chr3R 31615136 3` UTR Med + chr3R 31615262 3` UTR Med + chr3R 31615387 3` UTR CG11539 - chr3R_15_31615001 chr3R_31615001 D9 2386 chr3R 31630035 31630086 chr3R 31630165 31630216 26 130 4.5 4.5 4.5 4.7 181 chr3R 31630035 intron kek6 + chr3R 31630126 intron kek6 + chr3R 31630216 intron kek6 + chr3R_26_31630001 chr3R_31630001 D9 2387 chr3R 31684437 31684491 chr3R 31684580 31684634 14 143 3.5 6.0 4.8 2.4 197 chr3R 31684437 intergenic not near genes chr3R 31684536 intergenic not near genes chr3R 31684634 intergenic not near genes chr3R_14_31680001 chr3R_31680001 D9 2388 chr3R 31691512 31691559 chr3R 31696303 31696350 Doc 24 4791 6.5 10.5 8.5 2.5 4838 chr3R 31691512 intergenic not near genes chr3R 31693931 intergenic not near genes chr3R 31696350 intergenic not near genes chr3R_24_31690001 chr3R_31690001 D9 2389 chr3R 31699696 31699709 chr3R 31699803 31699816 6 106 16.5 9.0 12.8 0.4 120 chr3R 31699696 intergenic not near genes chr3R 31699756 intergenic not near genes chr3R 31699816 intergenic not near genes chr3R_6_31695001 chr3R_31695001 D9 2390 chr3R 31699713 31699749 chr3R 31699802 31699856 7 103 7.5 8.5 8.0 0.8 143 chr3R 31699713 intergenic not near genes chr3R 31699784 intergenic not near genes chr3R 31699856 intergenic not near genes chr3R_7_31695001 chr3R_31695001 D9 2391 chr3R 31819191 31819242 chr3R 31819662 31819712 25 470 5.0 11.5 8.2 2.7 521 chr3R 31819191 intron RhoGAP100F + chr3R 31819452 intron RhoGAP100F + chr3R 31819712 intron RhoGAP100F + chr3R_25_31815001 chr3R_31815001 D9 2392 chr3R 31831519 31831566 chr3R 31831623 31831670 12 103 6.5 9.0 7.8 1.4 151 chr3R 31831519 intron RhoGAP100F + chr3R 31831594 intron RhoGAP100F + chr3R 31831670 intron RhoGAP100F + chr3R_12_31830001 chr3R_31830001 D9 2393 chr3R 31865019 31865063 chr3R 31865122 31865175 11 109 0.0 6.5 3.2 2.6 156 chr3R 31865019 intron heph - chr3R 31865097 intron heph - chr3R 31865175 exon heph - chr3R_11_31865001 chr3R_31865001 D9 2394 chr3R 31924556 31924606 chr3R 31924656 31924712 10 104 0.5 3.0 1.8 3.6 156 chr3R 31924556 intron heph - chr3R 31924634 intron heph - chr3R 31924712 intron heph - chr3R_10_31920001 chr3R_31920001 D9 2395 chr3R 31925678 31925725 chr3R 31925779 31925801 8 97 2.0 2.5 2.2 2.5 123 chr3R 31925678 intron heph - chr3R 31925740 intron heph - chr3R 31925801 intron heph - chr3R_8_31925001 chr3R_31925001 D9 2396 chr3R 31931168 31931213 chr3R 31931276 31931319 9 105 1.5 3.5 2.5 2.6 151 chr3R 31931168 intron heph - chr3R 31931244 intron heph - chr3R 31931319 intron heph - chr3R_9_31930001 chr3R_31930001 D9 2397 chr3R 31969869 31969921 chr3R 31969973 31970025 8 104 2.0 1.0 1.5 3.2 156 chr3R 31969869 intron heph - chr3R 31969947 intron heph - chr3R 31970025 intron heph - chr3R_8_31965001 chr3R_31965001 D9 2398 chr3R 31991082 31991137 chr3R 31991186 31991239 13 104 3.5 3.0 3.2 3.1 157 chr3R 31991082 intron heph - chr3R 31991160 intron heph - chr3R 31991239 intron heph - chr3R_13_31990001 chr3R_31990001 D9 2399 chr3R 31997983 31998022 chr3R 32005478 32005516 blood 11 7492 3.5 5.0 4.2 2.1 7533 chr3R 31997983 intron heph - chr3R 32001750 intron heph - chr3R 32005516 intron heph - chr3R_11_32000001 chr3R_32000001 D9 2400 chr3R 32034236 32034285 chr3R 32034344 32034384 12 107 6.5 4.5 5.5 1.8 148 chr3R 32034236 intergenic not near genes chr3R 32034310 intergenic not near genes chr3R 32034384 intergenic not near genes chr3R_12_32030001 chr3R_32030001 D9 2401 chr3R 32061713 32061734 chr3R 32062032 32062053 5 319 19.5 14.0 16.8 0.3 340 chr3R 32061713 intron Map205 - chr3R 32061883 intron Map205 - chr3R 32062053 intron Map205 - chr3R_5_32060001 chr3R_32060001 D9 2402 chr4 76474 76504 chr4 81940 81972 I-element 4 5466 3.5 2.0 2.8 1.1 5498 chr4 76474 intron pan + chr4 79223 intron pan + chr4 81972 intron pan + chr4_4_75001 chr4_75001 D9 2403 chr4 280780 280802 chr4 281435 281457 5 655 1.5 0.5 1.0 2.5 677 chr4 280780 intron Syt7 - chr4 281118 intron Syt7 - chr4 281457 intron Syt7 - chr4_5_280001 chr4_280001 D9 2404 chr4 671582 671616 chr4 680190 680224 Tirant 7 8608 4.5 5.0 4.8 1.2 8642 chr4 671582 intron CG11360 + chr4 675903 intron CG11360 + chr4 680224 intron CG11360 + chr4_7_675001 chr4_675001 D9 2405 chr4 972471 972526 chr4 972578 972633 5 107 1.0 1.5 1.2 2.3 162 chr4 972471 intron fuss - chr4 972552 intron fuss - chr4 972633 intron fuss - chr4_5_970001 chr4_970001 D9 2406 chrX 827597 827620 chrX 835414 835437 roo 5 7817 2.5 4.0 3.2 1.2 7840 chrX 827597 intron CG43867 - chrX 831517 intron CG43867 - chrX 835437 intron CG43867 - chrX_5_830001 chrX_830001 D9 2407 chrX 906686 906733 chrX 908500 908547 S-element 20 1813 6.0 8.5 7.2 2.4 1861 chrX 906686 intron CG43867 - chrX 907616 intron CG43867 - chrX 908547 intron CG43867 - chrX_20_905001 chrX_905001 D9 2408 chrX 1063736 1063751 chrX 1072552 1072569 roo 4 8818 4.0 5.5 4.8 0.7 8833 chrX 1063736 intron CR44779 + chrX 1068152 intron CR44779 + chrX 1072569 intron CR44779 + chrX_4_1065001 chrX_1065001 D9 2409 chrX 1627970 1627974 chrX 1635461 1635467 gtwin 5 7493 8.0 7.5 7.8 0.6 7497 chrX 1627970 intron,intron Mur2B -,br + chrX 1631718 intron,intron Mur2B -,br + chrX 1635467 intron,intron Mur2B -,br + chrX_5_1630001 chrX_1630001 D9 2410 chrX 2308820 2308824 chrX 2317426 2317432 Tirant 7 8608 3.5 14.5 9.0 0.7 8612 chrX 2308820 intron phl + chrX 2313126 intron phl + chrX 2317432 intron phl + chrX_7_2310001 chrX_2310001 D9 2411 chrX 2399816 2399868 chrX 2408192 2408245 roo 35 8377 5.0 8.5 6.8 4.5 8429 chrX 2399816 intergenic not near genes chrX 2404030 intergenic not near genes chrX 2408245 intergenic not near genes chrX_35_2400001 chrX_2400001 D9 2412 chrX 2578793 2578844 chrX 2578910 2578960 14 117 3.5 6.0 4.8 2.4 167 chrX 2578793 intergenic Pdfr +,Vha36-3 - chrX 2578876 intergenic Vha36-3 -,Pdfr + chrX 2578960 intergenic Vha36-3 -,Pdfr + chrX_14_2575001 chrX_2575001 D9 2413 chrX 2664371 2664407 chrX 2665542 2665578 1360 11 1171 3.0 3.0 3.0 2.8 1207 chrX 2664371 intron sgg + chrX 2664974 intron sgg + chrX 2665578 intron sgg + chrX_11_2660001 chrX_2660001 D9 2414 chrX 2844881 2844930 chrX 2852316 2852365 mdg1 5 7435 0.5 4.0 2.2 1.6 7484 chrX 2844881 intron kirre + chrX 2848623 intron kirre + chrX 2852365 intron kirre + chrX_5_2845001 chrX_2845001 D9 2415 chrX 2888089 2888147 chrX 2888192 2888250 30 103 14.0 17.0 15.5 1.8 161 chrX 2888089 intron kirre + chrX 2888170 intron kirre + chrX 2888250 intron kirre + chrX_30_2885001 chrX_2885001 D9 2416 chrX 3031151 3031190 chrX 3031260 3031298 4 106 4.0 2.0 3.0 1.0 147 chrX 3031151 intron kirre + chrX 3031224 intron kirre + chrX 3031298 intron kirre + chrX_4_3030001 chrX_3030001 D9 2417 chrX 3120071 3120091 chrX 3120172 3120194 4 102 0.0 7.5 3.8 0.8 123 chrX 3120071 intron kirre + chrX 3120132 intron kirre + chrX 3120194 intron kirre + chrX_4_3120001 chrX_3120001 D9 2418 chrX 3264339 3264379 chrX 3264490 3264532 21 152 7.5 11.0 9.2 2.1 193 chrX 3264339 intron dnc + chrX 3264436 intron dnc + chrX 3264532 intron dnc + chrX_21_3260001 chrX_3260001 D9 2419 chrX 3306319 3306371 chrX 3306426 3306475 11 107 2.5 1.0 1.8 3.9 156 chrX 3306319 intron dnc + chrX 3306397 intron dnc + chrX 3306475 intron dnc + chrX_11_3305001 chrX_3305001 D9 2420 chrX 3351797 3351814 chrX 3351889 3351925 17 103 13.0 9.5 11.2 1.4 128 chrX 3351797 intergenic not near genes chrX 3351861 intergenic not near genes chrX 3351925 intergenic not near genes chrX_17_3350001 chrX_3350001 D9 2421 chrX 3415014 3415043 chrX 3421224 3421253 3S18 7 6210 3.0 3.5 3.2 1.7 6239 chrX 3415014 intron,intron CR44999 +,CG12535 - chrX 3418134 intron,intron CR44999 +,CG12535 - chrX 3421253 intron,intron CR44999 +,CG12535 - chrX_7_3415001 chrX_3415001 D9 2422 chrX 3433409 3433435 chrX 3433518 3433545 15 108 11.0 13.0 12.0 1.2 136 chrX 3433409 intron,intron CR44999 +,CG12535 - chrX 3433477 intron,intron CR44999 +,CG12535 - chrX 3433545 intron,intron CR44999 +,CG12535 - chrX_15_3430001 chrX_3430001 D9 2423 chrX 3459957 3460010 chrX 3460059 3460112 19 102 4.0 2.0 3.0 4.8 155 chrX 3459957 intron,intron CR44999 +,CG16782 - chrX 3460034 intron,5` UTR CR44999 +,CG16782 - chrX 3460112 intron,5` UTR CR44999 +,CG16782 - chrX_19_3460001 chrX_3460001 D9 2424 chrX 3481717 3481774 chrX 3481818 3481875 12 100 3.5 2.0 2.8 3.2 158 chrX 3481717 intron,intron CR44999 +,CG10804 - chrX 3481796 intron,intron CR44999 +,CG10804 - chrX 3481875 intron,intron CR44999 +,CG10804 - chrX_12_3480001 chrX_3480001 D9 2425 chrX 3493065 3493114 chrX 3502249 3502298 roo 23 9184 6.0 6.0 6.0 3.3 9233 chrX 3493065 intron,intron CR44999 +,Gas8 - chrX 3497682 intron,intron CR44999 +,Gas8 - chrX 3502298 intron,intron CR44999 +,Gas8 - chrX_23_3495001 chrX_3495001 D9 2426 chrX 3513734 3513779 chrX 3513842 3513887 15 108 5.0 4.0 4.5 2.7 153 chrX 3513734 intron,intron CR44999 +,CG32791 - chrX 3513810 intron,intron CR44999 +,CG32791 - chrX 3513887 intron,intron CR44999 +,CG32791 - chrX_15_3510001 chrX_3510001 D9 2427 chrX 3535388 3535426 chrX 3535500 3535542 12 115 1.5 3.5 2.5 3.4 154 chrX 3535388 intron CG32791 - chrX 3535465 intron CG32791 - chrX 3535542 intron CG32791 - chrX_12_3535001 chrX_3535001 D9 2428 chrX 3597528 3597574 chrX 3619721 3619767 roo 18 22193 8.0 4.0 6.0 2.6 22239 chrX 3597528 intron AstA-R1 + chrX 3608648 intron AstA-R1 + chrX 3619767 intron AstA-R1 + chrX_18_3605001 chrX_3605001 D9 2429 chrX 3657388 3657445 chrX 3657493 3657549 19 105 5.5 6.5 6.0 2.7 161 chrX 3657388 intron AstA-R1 + chrX 3657468 intron AstA-R1 + chrX 3657549 intron AstA-R1 + chrX_19_3655001 chrX_3655001 D9 2430 chrX 3662456 3662474 chrX 3662565 3662583 6 108 11.0 0.0 5.5 0.9 127 chrX 3662456 intron AstA-R1 + chrX 3662520 intron AstA-R1 + chrX 3662583 intron AstA-R1 + chrX_6_3660001 chrX_3660001 D9 2431 chrX 3703695 3703700 chrX 3703808 3703813 4 113 2.5 2.0 2.2 1.2 118 chrX 3703695 intergenic CR45102 + chrX 3703754 intergenic CR45102 + chrX 3703813 intergenic not near genes chrX_4_3700001 chrX_3700001 D9 2432 chrX 3713078 3713127 chrX 3713211 3713261 6 134 4.5 3.0 3.8 1.2 183 chrX 3713078 intron Rala - chrX 3713170 intron Rala - chrX 3713261 intron Rala - chrX_6_3710001 chrX_3710001 D9 2433 chrX 3726738 3726776 chrX 3730160 3730196 NOF 13 3422 4.5 0.0 2.2 4.1 3458 chrX 3726738 intron tlk + chrX 3728467 intron tlk + chrX 3730196 intron tlk + chrX_13_3725001 chrX_3725001 D9 2434 chrX 3768256 3768278 chrX 3768358 3768380 6 102 11.5 2.0 6.8 0.8 124 chrX 3768256 intron tlk + chrX 3768318 intron tlk + chrX 3768380 intron tlk + chrX_6_3765001 chrX_3765001 D9 2435 chrX 3798051 3798068 chrX 3798167 3798184 12 116 11.5 28.5 20.0 0.6 133 chrX 3798051 intergenic not near genes chrX 3798118 intergenic not near genes chrX 3798184 intergenic not near genes chrX_12_3795001 chrX_3795001 D9 2436 chrX 3817074 3817110 chrX 3817185 3817221 16 111 4.5 14.0 9.2 1.6 147 chrX 3817074 intron ec + chrX 3817148 intron ec + chrX 3817221 intron ec + chrX_16_3815001 chrX_3815001 D9 2437 chrX 3842326 3842353 chrX 3842569 3842596 pogo 11 243 5.5 4.0 4.8 1.9 270 chrX 3842326 intron ec + chrX 3842461 intron ec + chrX 3842596 intron ec + chrX_11_3840001 chrX_3840001 D9 2438 chrX 3862804 3862845 chrX 3862916 3862957 8 112 5.0 5.0 5.0 1.3 153 chrX 3862804 intergenic yin - chrX 3862880 intergenic yin - chrX 3862957 intergenic yin - chrX_8_3860001 chrX_3860001 D9 2439 chrX 3866082 3866124 chrX 3866185 3866227 23 103 3.5 0.5 2.0 7.7 145 chrX 3866082 intron yin - chrX 3866154 intron yin - chrX 3866227 intron yin - chrX_23_3865001 chrX_3865001 D9 2440 chrX 3874714 3874772 chrX 3874820 3874878 17 104 3.5 9.0 6.2 2.4 164 chrX 3874714 intron CG2930 + chrX 3874796 intron CG2930 + chrX 3874878 intron CG2930 + chrX_17_3870001 chrX_3870001 D9 2441 chrX 3880475 3880488 chrX 3880586 3880599 5 111 2.0 11.5 6.8 0.6 124 chrX 3880475 intergenic VhaAC39-1 + chrX 3880537 intergenic VhaAC39-1 + chrX 3880599 intergenic VhaAC39-1 + chrX_5_3880001 chrX_3880001 D9 2442 chrX 3881246 3881301 chrX 3881410 3881465 43 164 8.0 8.5 8.2 4.7 219 chrX 3881246 intron VhaAC39-1 + chrX 3881356 intron VhaAC39-1 + chrX 3881465 exon VhaAC39-1 + chrX_43_3880001 chrX_3880001 D9 2443 chrX 3890642 3890684 chrX 3890991 3891034 25 350 6.0 8.0 7.0 3.1 392 chrX 3890642 intergenic CG15239 + chrX 3890838 intergenic CG15239 + chrX 3891034 intergenic CG42541 - chrX_25_3890001 chrX_3890001 D9 2444 chrX 3899604 3899622 chrX 3899706 3899722 17 101 29.5 27.0 28.2 0.6 118 chrX 3899604 intron CG42541 - chrX 3899663 intron CG42541 - chrX 3899722 intron CG42541 - chrX_17_3895001 chrX_3895001 D9 2445 chrX 3986839 3986890 chrX 3994497 3994548 412 13 7658 3.5 6.5 5.0 2.2 7709 chrX 3986839 intergenic not near genes chrX 3990694 intergenic not near genes chrX 3994548 intergenic not near genes chrX_13_3990001 chrX_3990001 D9 2446 chrX 3999274 3999290 chrX 3999374 3999397 18 105 22.5 9.5 16.0 1.1 123 chrX 3999274 intergenic not near genes chrX 3999336 intergenic not near genes chrX 3999397 intergenic not near genes chrX_18_3995001 chrX_3995001 D9 2447 chrX 3999291 3999326 chrX 3999373 3999421 20 104 10.0 9.5 9.8 1.9 130 chrX 3999291 intergenic not near genes chrX 3999356 intergenic not near genes chrX 3999421 intergenic not near genes chrX_20_3995001 chrX_3995001 D9 2448 chrX 4001645 4001660 chrX 4001747 4001750 5 99 3.0 0.0 1.5 2.0 105 chrX 4001645 intergenic CR43298 - chrX 4001698 intergenic CR43298 - chrX 4001750 intergenic CR43298 - chrX_5_4000001 chrX_4000001 D9 2449 chrX 4039055 4039071 chrX 4039157 4039173 18 102 22.5 26.0 24.2 0.7 118 chrX 4039055 intergenic not near genes chrX 4039114 intergenic not near genes chrX 4039173 intergenic not near genes chrX_18_4035001 chrX_4035001 D9 2450 chrX 4041949 4041960 chrX 4042049 4042059 6 101 7.5 11.0 9.2 0.6 110 chrX 4041949 intergenic not near genes chrX 4042004 intergenic not near genes chrX 4042059 intergenic not near genes chrX_6_4040001 chrX_4040001 D9 2451 chrX 4067987 4067988 chrX 10754861 10754863 5 6686874 40.0 38.0 39.0 0.1 6686876 chrX 4067987 intergenic not near genes chrX 7411425 3` UTR CG42246 - chrX 10754863 intron Rph - chrX_5_7410001 chrX_7410001 D9 2452 chrX 4101848 4101896 chrX 4101952 4102001 16 104 1.0 5.5 3.2 3.8 153 chrX 4101848 exon CG15375 + chrX 4101924 exon CG15375 + chrX 4102001 exon CG15375 + chrX_16_4100001 chrX_4100001 D9 2453 chrX 4132399 4132411 chrX 4132501 4132513 5 102 6.5 9.0 7.8 0.6 114 chrX 4132399 3` UTR GlcAT-I + chrX 4132456 3` UTR GlcAT-I + chrX 4132513 3` UTR GlcAT-I + chrX_5_4130001 chrX_4130001 D9 2454 chrX 4157873 4157922 chrX 4164951 4165000 297 16 7078 8.5 6.0 7.2 2.0 7127 chrX 4157873 intron Fas2 - chrX 4161436 intron Fas2 - chrX 4165000 intron Fas2 - chrX_16_4160001 chrX_4160001 D9 2455 chrX 4185672 4185695 chrX 4185782 4185805 13 110 21.5 0.5 11.0 1.1 133 chrX 4185672 intron Fas2 - chrX 4185738 intron Fas2 - chrX 4185805 intron Fas2 - chrX_13_4185001 chrX_4185001 D9 2456 chrX 4185697 4185721 chrX 4185776 4185829 16 108 8.5 0.5 4.5 2.9 132 chrX 4185697 intron Fas2 - chrX 4185763 intron Fas2 - chrX 4185829 intron Fas2 - chrX_16_4185001 chrX_4185001 D9 2457 chrX 4209904 4209958 chrX 4210019 4210070 10 114 0.0 6.5 3.2 2.4 166 chrX 4209904 intergenic not near genes chrX 4209987 intergenic not near genes chrX 4210070 intergenic not near genes chrX_10_4205001 chrX_4205001 D9 2458 chrX 4216315 4216335 chrX 4216419 4216439 17 104 9.5 5.5 7.5 2.0 124 chrX 4216315 intergenic not near genes chrX 4216377 intergenic CG15571 - chrX 4216439 intergenic CG15571 - chrX_17_4215001 chrX_4215001 D9 2459 chrX 4229956 4229979 chrX 4230097 4230120 7 141 8.5 1.5 5.0 1.2 164 chrX 4229956 intergenic not near genes chrX 4230038 intergenic not near genes chrX 4230120 intergenic not near genes chrX_7_4230001 chrX_4230001 D9 2460 chrX 4230612 4230619 chrX 4230797 4230859 10 220 0.0 7.0 3.5 2.2 247 chrX 4230612 intergenic not near genes chrX 4230736 intergenic not near genes chrX 4230859 intergenic not near genes chrX_10_4230001 chrX_4230001 D9 2461 chrX 4235720 4235739 chrX 4235872 4235891 10 152 11.0 8.5 9.8 0.9 171 chrX 4235720 intergenic not near genes chrX 4235806 intergenic not near genes chrX 4235891 intergenic not near genes chrX_10_4235001 chrX_4235001 D9 2462 chrX 4262728 4262788 chrX 4262852 4262912 46 124 9.0 7.0 8.0 5.1 184 chrX 4262728 intergenic not near genes chrX 4262820 intergenic not near genes chrX 4262912 intergenic not near genes chrX_46_4260001 chrX_4260001 D9 2463 chrX 4267294 4267345 chrX 4267399 4267447 22 105 9.5 9.5 9.5 2.1 153 chrX 4267294 intergenic not near genes chrX 4267370 intergenic not near genes chrX 4267447 intergenic not near genes chrX_22_4265001 chrX_4265001 D9 2464 chrX 4276457 4276512 chrX 4276561 4276611 33 102 5.0 8.5 6.8 4.2 154 chrX 4276457 intergenic CG15577 -,CR45483 - chrX 4276534 3` UTR CG15577 - chrX 4276611 exon CG15577 - chrX_33_4275001 chrX_4275001 D9 2465 chrX 4343858 4343886 chrX 4343998 4344025 5 139 6.5 1.0 3.8 1.0 167 chrX 4343858 intron norpA + chrX 4343942 intron norpA + chrX 4344025 intron norpA + chrX_5_4340001 chrX_4340001 D9 2466 chrX 4361411 4361443 chrX 4361513 4361545 6 101 3.0 5.0 4.0 1.2 134 chrX 4361411 intron norpA + chrX 4361478 intron norpA + chrX 4361545 intron norpA + chrX_6_4360001 chrX_4360001 D9 2467 chrX 4396951 4397007 chrX 4397061 4397117 27 110 5.0 9.5 7.2 3.3 166 chrX 4396951 intron CR32773 - chrX 4397034 intron CR32773 - chrX 4397117 intron CR32773 - chrX_27_4395001 chrX_4395001 D9 2468 chrX 4687648 4687688 chrX 9321188 9321230 10 4633541 4.0 41.5 22.8 0.4 4633582 chrX 4687648 intergenic not near genes chrX 7004439 intron Inx7 - chrX 9321230 exon c12.2 + chrX_10_7000001 chrX_7000001 D9 2469 chrX 4787049 4787093 chrX 4787172 4787216 9 122 4.0 4.5 4.2 1.7 167 chrX 4787049 intergenic not near genes chrX 4787132 intergenic not near genes chrX 4787216 intergenic not near genes chrX_9_4785001 chrX_4785001 D9 2470 chrX 4792365 4792398 chrX 4792820 4792856 jockey 13 458 6.0 5.5 5.8 1.9 491 chrX 4792365 intergenic not near genes chrX 4792610 intergenic not near genes chrX 4792856 intergenic not near genes chrX_13_4790001 chrX_4790001 D9 2471 chrX 4827947 4827996 chrX 4835343 4835390 Stalker4 14 7394 5.0 9.5 7.2 1.7 7443 chrX 4827947 intergenic not near genes chrX 4831668 intergenic not near genes chrX 4835390 intergenic not near genes chrX_14_4830001 chrX_4830001 D9 2472 chrX 4835606 4835655 chrX 4835792 4835844 16 189 1.5 7.5 4.5 2.9 238 chrX 4835606 intergenic not near genes chrX 4835725 intergenic not near genes chrX 4835844 intergenic not near genes chrX_16_4835001 chrX_4835001 D9 2473 chrX 4864150 4864164 chrX 4864253 4864267 9 103 11.5 9.0 10.2 0.8 117 chrX 4864150 intron CG42594 + chrX 4864208 intron CG42594 + chrX 4864267 intron CG42594 + chrX_9_4860001 chrX_4860001 D9 2474 chrX 4946556 4946606 chrX 4946659 4946710 19 104 10.0 5.5 7.8 2.2 154 chrX 4946556 intron Ptp4E + chrX 4946633 intron Ptp4E + chrX 4946710 intron Ptp4E + chrX_19_4945001 chrX_4945001 D9 2475 chrX 4961816 4961859 chrX 4962043 4962086 17 225 10.0 6.5 8.2 1.8 270 chrX 4961816 intron CR44833 - chrX 4961951 intron CR44833 - chrX 4962086 intron CR44833 - chrX_17_4960001 chrX_4960001 D9 2476 chrX 4990021 4990075 chrX 4997260 4997314 roo 13 7238 4.5 5.0 4.8 2.2 7293 chrX 4990021 intron CR44833 - chrX 4993668 intron CR44833 - chrX 4997314 intron CR44833 - chrX_13_4990001 chrX_4990001 D9 2477 chrX 5049553 5049602 chrX 5049666 5049715 12 113 5.5 0.0 2.8 3.2 162 chrX 5049553 intron,intron CR44833 -,ovo + chrX 5049634 intron,intron CR44833 -,ovo + chrX 5049715 intron,intron CR44833 -,ovo + chrX_12_5045001 chrX_5045001 D9 2478 chrX 5096253 5096305 chrX 5103842 5103893 springer 14 7590 7.0 8.5 7.8 1.6 7640 chrX 5096253 intron,intron CG15465 +,rg + chrX 5100073 intron,intron CG15465 +,rg + chrX 5103893 intron,intron CG15465 +,rg + chrX_14_5100001 chrX_5100001 D9 2479 chrX 5291483 5291513 chrX 5291591 5291621 11 108 12.0 9.5 10.8 0.9 138 chrX 5291483 intergenic not near genes chrX 5291552 intergenic not near genes chrX 5291621 intergenic not near genes chrX_11_5290001 chrX_5290001 D9 2480 chrX 5338682 5338733 chrX 5339960 5340011 jockey 17 1278 5.0 8.0 6.5 2.3 1329 chrX 5338682 intergenic not near genes chrX 5339346 intergenic not near genes chrX 5340011 intergenic SK + chrX_17_5335001 chrX_5335001 D9 2481 chrX 5345434 5345472 chrX 5345568 5345609 6 136 2.5 7.0 4.8 1.0 175 chrX 5345434 intron SK + chrX 5345522 intron SK + chrX 5345609 intron SK + chrX_6_5345001 chrX_5345001 D9 2482 chrX 5350308 5350314 chrX 5350411 5350417 7 103 16.0 20.0 18.0 0.4 109 chrX 5350308 intron SK + chrX 5350362 intron SK + chrX 5350417 intron SK + chrX_7_5350001 chrX_5350001 D9 2483 chrX 5473563 5473615 chrX 5473664 5473716 11 101 3.5 4.5 4.0 2.2 153 chrX 5473563 intron SPR + chrX 5473640 intron SPR + chrX 5473716 intron SPR + chrX_11_5470001 chrX_5470001 D9 2484 chrX 5481065 5481092 chrX 5485058 5485083 I-element 5 3991 1.5 6.5 4.0 1.0 4018 chrX 5481065 intron SPR + chrX 5483074 intron SPR + chrX 5485083 intron SPR + chrX_5_5480001 chrX_5480001 D9 2485 chrX 5509074 5509129 chrX 5509191 5509246 32 117 3.0 4.5 3.8 6.7 172 chrX 5509074 intergenic not near genes chrX 5509160 intergenic not near genes chrX 5509246 intergenic not near genes chrX_32_5505001 chrX_5505001 D9 2486 chrX 5524818 5524853 chrX 5528702 5528741 412 6 3885 8.5 3.0 5.8 0.9 3923 chrX 5524818 intergenic snoRNA:Psi28S-3342 - chrX 5526780 intergenic not near genes chrX 5528741 intergenic Vsx2 - chrX_6_5525001 chrX_5525001 D9 2487 chrX 5727399 5727413 chrX 5732163 5732177 Doc 4 4764 6.0 4.5 5.2 0.6 4778 chrX 5727399 intron CG32758 - chrX 5729788 intron CG32758 - chrX 5732177 intron CG32758 - chrX_4_5725001 chrX_5725001 D9 2488 chrX 6335216 6335242 chrX 6337750 6337777 Tirant 5 2535 0.5 7.5 4.0 1.0 2561 chrX 6335216 intergenic not near genes chrX 6336496 intergenic not near genes chrX 6337777 5` UTR CG3842 + chrX_5_6335001 chrX_6335001 D9 2489 chrX 6388644 6388678 chrX 6388745 6388779 4 101 2.0 4.5 3.2 1.0 135 chrX 6388644 intergenic not near genes chrX 6388712 intergenic not near genes chrX 6388779 intergenic not near genes chrX_4_6385001 chrX_6385001 D9 2490 chrX 6425005 6425051 chrX 6425537 6425583 15 532 29.5 37.0 33.2 0.4 578 chrX 6425005 intron CG42340 - chrX 6425294 intron CG42340 - chrX 6425583 intron CG42340 - chrX_15_6425001 chrX_6425001 D9 2491 chrX 6429982 6429988 chrX 6435480 6435486 Rt1c 5 5498 10.0 19.5 14.8 0.3 5504 chrX 6429982 intron CG42340 - chrX 6432734 intron CG42340 - chrX 6435486 intron CG42340 - chrX_5_6430001 chrX_6430001 D9 2492 chrX 6457411 6457446 chrX 6457517 6457552 13 105 8.5 5.5 7.0 1.6 141 chrX 6457411 intron CG42340 - chrX 6457482 intron CG42340 - chrX 6457552 intron CG42340 - chrX_13_6455001 chrX_6455001 D9 2493 chrX 6562796 6562848 chrX 6571302 6571354 Tirant 26 8506 6.5 12.5 9.5 2.5 8558 chrX 6562796 intron CG34417 + chrX 6567075 intron CG34417 + chrX 6571354 intron CG34417 + chrX_26_6565001 chrX_6565001 D9 2494 chrX 6591832 6591869 chrX 6591942 6591979 8 110 7.5 0.0 3.8 1.7 147 chrX 6591832 intron Pat1 + chrX 6591906 intron Pat1 + chrX 6591979 intron Pat1 + chrX_8_6590001 chrX_6590001 D9 2495 chrX 6592037 6592083 chrX 6592258 6592304 14 221 1.0 3.0 2.0 4.7 267 chrX 6592037 intron Pat1 + chrX 6592170 intron Pat1 + chrX 6592304 intron Pat1 + chrX_14_6590001 chrX_6590001 D9 2496 chrX 6605457 6605504 chrX 6608504 6608551 Burdock 5 3047 1.5 3.0 2.2 1.6 3094 chrX 6605457 intron pigs + chrX 6607004 intron pigs + chrX 6608551 intron pigs + chrX_5_6605001 chrX_6605001 D9 2497 chrX 6733668 6733672 chrX 6733774 6733778 4 106 6.5 18.5 12.5 0.3 110 chrX 6733668 intron,intron CG3168 -,CR43461 + chrX 6733723 intron,intron CG3168 -,CR43461 + chrX 6733778 intron,intron CG3168 -,CR43461 + chrX_4_6730001 chrX_6730001 D9 2498 chrX 6792060 6792088 chrX 6792176 6792204 6 116 10.0 6.0 8.0 0.7 144 chrX 6792060 intron C3G - chrX 6792132 intron C3G - chrX 6792204 intron C3G - chrX_6_6790001 chrX_6790001 D9 2499 chrX 6814251 6814265 chrX 6814363 6814377 4 112 6.5 0.0 3.2 1.0 126 chrX 6814251 exon iav + chrX 6814314 intron iav + chrX 6814377 intron iav + chrX_4_6810001 chrX_6810001 D9 2500 chrX 6859542 6859554 chrX 6859980 6859992 7 438 9.5 0.0 4.8 1.2 450 chrX 6859542 intron CG14434 - chrX 6859767 intron CG14434 - chrX 6859992 intron CG14434 - chrX_7_6855001 chrX_6855001 D9 2501 chrX 6896193 6896224 chrX 6896299 6896330 15 105 9.0 2.5 5.8 2.2 137 chrX 6896193 intergenic not near genes chrX 6896262 intergenic not near genes chrX 6896330 intergenic not near genes chrX_15_6895001 chrX_6895001 D9 2502 chrX 6897563 6897570 chrX 6897666 6897673 4 102 0.5 0.0 0.2 3.3 110 chrX 6897563 intergenic not near genes chrX 6897618 intergenic not near genes chrX 6897673 intergenic not near genes chrX_4_6895001 chrX_6895001 D9 2503 chrX 6897572 6897585 chrX 7243793 7243806 5 346221 0.5 8.0 4.2 1.0 346234 chrX 6897572 intergenic not near genes chrX 7070689 exon CG4607 + chrX 7243806 intron CR44357 - chrX_5_7070001 chrX_7070001 D9 2504 chrX 6897590 6897711 chrX 6897691 6897846 16 133 0.0 0.0 0.0 16.0 256 chrX 6897590 intergenic not near genes chrX 6897718 intergenic not near genes chrX 6897846 intergenic not near genes chrX_16_6895001 chrX_6895001 D9 2505 chrX 6901368 6901385 chrX 6901469 6901484 6 101 3.0 8.0 5.5 0.9 116 chrX 6901368 intergenic not near genes chrX 6901426 intergenic not near genes chrX 6901484 intergenic not near genes chrX_6_6900001 chrX_6900001 D9 2506 chrX 6984598 6984653 chrX 6984700 6984755 14 102 1.5 2.5 2.0 4.7 157 chrX 6984598 intron ogre - chrX 6984676 intron ogre - chrX 6984755 intron ogre - chrX_14_6980001 chrX_6980001 D9 2507 chrX 6989477 6989533 chrX 6989589 6989643 17 111 3.0 1.5 2.2 5.3 166 chrX 6989477 intron ogre - chrX 6989560 intron ogre - chrX 6989643 intron ogre - chrX_17_6985001 chrX_6985001 D9 2508 chrX 7023579 7023624 chrX 7030994 7031039 Tabor 13 7415 8.0 4.0 6.0 1.9 7460 chrX 7023579 intron CG12541 - chrX 7027309 intron CG12541 - chrX 7031039 intron CG12541 - chrX_13_7025001 chrX_7025001 D9 2509 chrX 7125225 7125269 chrX 7134409 7134453 roo 21 9184 1.0 5.0 3.0 5.2 9228 chrX 7125225 intergenic not near genes chrX 7129839 intergenic not near genes chrX 7134453 intergenic not near genes chrX_21_7125001 chrX_7125001 D9 2510 chrX 7294497 7294542 chrX 7294616 7294665 24 122 8.0 4.5 6.2 3.3 168 chrX 7294497 intron,intron CR44357 -,CG1677 - chrX 7294581 intron,intron CR44357 -,CG1677 - chrX 7294665 intron,intron CR44357 -,CG1677 - chrX_24_7290001 chrX_7290001 D9 2511 chrX 7399205 7399238 chrX 7399317 7399350 11 111 4.0 5.0 4.5 2.0 145 chrX 7399205 intron,intron CR44357 -,CG1677 - chrX 7399278 intron,intron CR44357 -,CG1677 - chrX 7399350 intron,intron CR44357 -,CG1677 - chrX_11_7395001 chrX_7395001 D9 2512 chrX 7707212 7707240 chrX 7707467 7707495 7 251 8.5 1.5 5.0 1.2 283 chrX 7707212 intron CHES-1-like - chrX 7707354 intron CHES-1-like - chrX 7707495 intron CHES-1-like - chrX_7_7705001 chrX_7705001 D9 2513 chrX 7739702 7739740 chrX 7739820 7739861 7 120 1.5 3.0 2.2 2.2 159 chrX 7739702 3` UTR Tom40 + chrX 7739782 3` UTR Tom40 + chrX 7739861 3` UTR Tom40 + chrX_7_7735001 chrX_7735001 D9 2514 chrX 7807193 7807233 chrX 7807323 7807361 6 129 7.0 10.0 8.5 0.6 168 chrX 7807193 intergenic not near genes chrX 7807277 intergenic not near genes chrX 7807361 intergenic not near genes chrX_6_7805001 chrX_7805001 D9 2515 chrX 8015214 8015240 chrX 8015325 8015347 7 110 4.5 5.0 4.8 1.2 133 chrX 8015214 intron Tbh + chrX 8015280 intron Tbh + chrX 8015347 intron Tbh + chrX_7_8015001 chrX_8015001 D9 2516 chrX 8024628 8024655 chrX 8024729 8024756 9 101 11.5 3.5 7.5 1.1 128 chrX 8024628 intron Tbh + chrX 8024692 intron Tbh + chrX 8024756 intron Tbh + chrX_9_8020001 chrX_8020001 D9 2517 chrX 8031404 8031450 chrX 8035738 8035784 Juan 11 4334 8.5 8.0 8.2 1.2 4380 chrX 8031404 intergenic not near genes chrX 8033594 intergenic not near genes chrX 8035784 3` UTR CG2233 - chrX_11_8030001 chrX_8030001 D9 2518 chrX 8364831 8364879 chrX 8365253 8365316 BS 5 435 2.0 0.0 1.0 2.5 485 chrX 8364831 intron nAChRalpha3 - chrX 8365074 intron nAChRalpha3 - chrX 8365316 intron nAChRalpha3 - chrX_5_8365001 chrX_8365001 D9 2519 chrX 8371128 8371179 chrX 8371315 8371358 12 183 6.5 3.0 4.8 2.1 230 chrX 8371128 intergenic not near genes chrX 8371243 intergenic not near genes chrX 8371358 intergenic not near genes chrX_12_8370001 chrX_8370001 D9 2520 chrX 8421467 8421490 chrX 8421584 8421607 9 117 4.0 4.0 4.0 1.8 140 chrX 8421467 intron Trf2 + chrX 8421537 intron Trf2 + chrX 8421607 intron Trf2 + chrX_9_8420001 chrX_8420001 D9 2521 chrX 8621968 8622007 chrX 8622083 8622121 8 115 7.0 2.5 4.8 1.4 153 chrX 8621968 intergenic not near genes chrX 8622044 intergenic not near genes chrX 8622121 intergenic not near genes chrX_8_8620001 chrX_8620001 D9 2522 chrX 8772222 8772250 chrX 8772326 8772354 19 104 9.5 11.0 10.2 1.7 132 chrX 8772222 intron Lim1 - chrX 8772288 intron Lim1 - chrX 8772354 intron Lim1 - chrX_19_8770001 chrX_8770001 D9 2523 chrX 8803217 8803260 chrX 8803599 8803642 6 382 2.0 1.5 1.8 2.1 425 chrX 8803217 intron Lim1 - chrX 8803430 intron Lim1 - chrX 8803642 intron Lim1 - chrX_6_8800001 chrX_8800001 D9 2524 chrX 8922306 8922357 chrX 8922765 8922816 jockey 31 459 8.0 7.0 7.5 3.6 510 chrX 8922306 intron rdgA + chrX 8922561 intron rdgA + chrX 8922816 intron rdgA + chrX_31_8920001 chrX_8920001 D9 2525 chrX 8927573 8927611 chrX 8929868 8929906 NOF 13 2295 4.0 4.5 4.2 2.5 2333 chrX 8927573 intron rdgA + chrX 8928740 intron rdgA + chrX 8929906 intron rdgA + chrX_13_8925001 chrX_8925001 D9 2526 chrX 8948741 8948789 chrX 8956276 8956324 roo 15 7535 3.0 2.0 2.5 4.3 7583 chrX 8948741 intron rdgA + chrX 8952532 intron rdgA + chrX 8956324 intron rdgA + chrX_15_8950001 chrX_8950001 D9 2527 chrX 9218057 9218079 chrX 9218171 9218195 10 115 7.5 4.5 6.0 1.4 138 chrX 9218057 3` UTR t - chrX 9218126 3` UTR t - chrX 9218195 3` UTR t - chrX_10_9215001 chrX_9215001 D9 2528 chrX 9229887 9229939 chrX 9229986 9230044 16 104 4.0 5.0 4.5 2.9 157 chrX 9229887 intron CG12121 - chrX 9229966 intron CG12121 - chrX 9230044 intron CG12121 - chrX_16_9225001 chrX_9225001 D9 2529 chrX 9272992 9273043 chrX 9273098 9273149 9 106 1.5 3.5 2.5 2.6 157 chrX 9272992 intergenic Cfp1 -,CG16892 + chrX 9273070 intergenic Cfp1 -,CG16892 + chrX 9273149 intergenic Cfp1 -,CG16892 + chrX_9_9270001 chrX_9270001 D9 2530 chrX 9337918 9337973 chrX 9338035 9338090 20 116 6.5 6.5 6.5 2.7 172 chrX 9337918 intron CG34449 - chrX 9338004 intron CG34449 - chrX 9338090 exon CG34449 - chrX_20_9335001 chrX_9335001 D9 2531 chrX 9353355 9353362 chrX 9353462 9353469 6 107 0.0 4.0 2.0 2.0 114 chrX 9353355 intron CG34449 - chrX 9353412 intron CG34449 - chrX 9353469 intron CG34449 - chrX_6_9350001 chrX_9350001 D9 2532 chrX 9457822 9457853 chrX 9457924 9457953 7 102 7.0 6.0 6.5 0.9 131 chrX 9457822 intron mgl - chrX 9457888 intron mgl - chrX 9457953 intron mgl - chrX_7_9455001 chrX_9455001 D9 2533 chrX 9508119 9508156 chrX 9509662 9509699 jockey 10 1543 10.0 8.5 9.2 1.0 1580 chrX 9508119 intron CG32700 - chrX 9508909 intron CG32700 - chrX 9509699 intron CG32700 - chrX_10_9505001 chrX_9505001 D9 2534 chrX 9531631 9531671 chrX 9531736 9531776 11 105 6.0 0.0 3.0 2.8 145 chrX 9531631 intron CG32700 - chrX 9531704 intron CG32700 - chrX 9531776 intron CG32700 - chrX_11_9530001 chrX_9530001 D9 2535 chrX 9543389 9543406 chrX 9543491 9543509 4 103 2.5 4.5 3.5 0.9 120 chrX 9543389 intron CG32700 - chrX 9543449 intron CG32700 - chrX 9543509 intron CG32700 - chrX_4_9540001 chrX_9540001 D9 2536 chrX 9575766 9575822 chrX 9576115 9576167 mdg3 37 348 12.0 12.0 12.0 2.8 401 chrX 9575766 intron,exon CG32699 -,CG42395 - chrX 9575966 intron,intron CG32699 -,CG42395 - chrX 9576167 intron,5` UTR CG32699 -,CG42395 - chrX_37_9575001 chrX_9575001 D9 2537 chrX 9635086 9635122 chrX 9635212 9635248 15 126 8.0 8.5 8.2 1.6 162 chrX 9635086 intron l(1)G0232 - chrX 9635167 intron l(1)G0232 - chrX 9635248 intron l(1)G0232 - chrX_15_9635001 chrX_9635001 D9 2538 chrX 9758024 9758067 chrX 9758132 9758177 9 107 4.0 0.0 2.0 3.0 153 chrX 9758024 intergenic not near genes chrX 9758100 intergenic not near genes chrX 9758177 intergenic not near genes chrX_9_9755001 chrX_9755001 D9 2539 chrX 9784147 9784206 chrX 9784360 9784419 40 212 7.5 8.0 7.8 4.5 272 chrX 9784147 intron CG32698 + chrX 9784283 intron CG32698 + chrX 9784419 intron CG32698 + chrX_40_9780001 chrX_9780001 D9 2540 chrX 9791850 9791895 chrX 9791972 9792017 25 122 5.5 10.5 8.0 2.8 167 chrX 9791850 intron CG32698 + chrX 9791934 intron CG32698 + chrX 9792017 intron CG32698 + chrX_25_9790001 chrX_9790001 D9 2541 chrX 9839316 9839365 chrX 9839424 9839472 6 108 0.0 8.5 4.2 1.2 156 chrX 9839316 intron CG32698 + chrX 9839394 intron CG32698 + chrX 9839472 intron CG32698 + chrX_6_9835001 chrX_9835001 D9 2542 chrX 9842428 9842482 chrX 9843035 9843089 35 608 75.5 64.0 69.8 0.5 661 chrX 9842428 intron CG32698 + chrX 9842758 intron CG32698 + chrX 9843089 intron CG32698 + chrX_35_9840001 chrX_9840001 D9 2543 chrX 9923367 9923420 chrX 9923483 9923536 40 116 5.5 8.5 7.0 5.0 169 chrX 9923367 intergenic not near genes chrX 9923452 intergenic not near genes chrX 9923536 intergenic not near genes chrX_40_9920001 chrX_9920001 D9 2544 chrX 10138190 10138233 chrX 10145719 10145762 412 7 7528 6.5 2.0 4.2 1.3 7572 chrX 10138190 intron,intron RhoU +,CR44894 - chrX 10141976 intron,intron RhoU +,CR44894 - chrX 10145762 intron,intron RhoU +,CR44894 - chrX_7_10140001 chrX_10140001 D9 2545 chrX 10151899 10151934 chrX 10152001 10152034 20 102 4.0 7.0 5.5 3.1 135 chrX 10151899 intron CR44894 - chrX 10151966 intron CR44894 - chrX 10152034 intron CR44894 - chrX_20_10150001 chrX_10150001 D9 2546 chrX 10216820 10216850 chrX 10216926 10216956 14 106 11.5 6.0 8.8 1.4 136 chrX 10216820 3` UTR l(1)G0230 + chrX 10216888 3` UTR l(1)G0230 + chrX 10216956 3` UTR l(1)G0230 + chrX_14_10215001 chrX_10215001 D9 2547 chrX 10223655 10223708 chrX 10223799 10223852 16 144 7.0 7.5 7.2 2.0 197 chrX 10223655 intron CG34408 + chrX 10223754 intron CG34408 + chrX 10223852 intron CG34408 + chrX_16_10220001 chrX_10220001 D9 2548 chrX 10233133 10233157 chrX 10233237 10233263 7 106 9.5 3.0 6.2 1.0 130 chrX 10233133 intergenic Ipod - chrX 10233198 intergenic Ipod - chrX 10233263 intergenic Ipod - chrX_7_10230001 chrX_10230001 D9 2549 chrX 10314922 10314949 chrX 10315050 10315078 6 130 6.0 0.5 3.2 1.4 156 chrX 10314922 intron alpha-Man-I - chrX 10315000 intron alpha-Man-I - chrX 10315078 intron alpha-Man-I - chrX_6_10310001 chrX_10310001 D9 2550 chrX 10317529 10317582 chrX 10317632 10317685 9 103 0.0 2.5 1.2 4.1 156 chrX 10317529 intron alpha-Man-I - chrX 10317607 intron alpha-Man-I - chrX 10317685 intron alpha-Man-I - chrX_9_10315001 chrX_10315001 D9 2551 chrX 10330664 10330674 chrX 10330873 10330887 10 212 9.5 24.0 16.8 0.6 223 chrX 10330664 exon CG15306 - chrX 10330776 exon CG15306 - chrX 10330887 exon CG15306 - chrX_10_10330001 chrX_10330001 D9 2552 chrX 10348778 10348820 chrX 10356368 10356410 springer 7 7586 7.0 5.0 6.0 1.0 7632 chrX 10348778 intergenic snoRNA:U3:9B + chrX 10352594 intergenic not near genes chrX 10356410 intergenic l(1)G0289 - chrX_7_10350001 chrX_10350001 D9 2553 chrX 10447193 10447233 chrX 10449762 10449802 7 2569 17.5 19.0 18.2 0.4 2609 chrX 10447193 intron CG32683 - chrX 10448498 intron CG32683 - chrX 10449802 intron CG32683 - chrX_7_10445001 chrX_10445001 D9 2554 chrX 10550313 10550367 chrX 10550416 10550470 18 103 2.0 2.0 2.0 6.0 157 chrX 10550313 intron spri - chrX 10550392 intron spri - chrX 10550470 intron spri - chrX_18_10550001 chrX_10550001 D9 2555 chrX 10550831 10550885 chrX 10552323 10552377 hobo 22 1491 5.0 8.0 6.5 2.9 1546 chrX 10550831 intron spri - chrX 10551604 intron spri - chrX 10552377 intron spri - chrX_22_10550001 chrX_10550001 D9 2556 chrX 10651613 10651643 chrX 10651754 10651784 6 141 0.0 4.5 2.2 1.9 171 chrX 10651613 intron X11Lbeta + chrX 10651698 intron X11Lbeta + chrX 10651784 intron X11Lbeta + chrX_6_10650001 chrX_10650001 D9 2557 chrX 10658287 10658323 chrX 10658944 10658980 12 657 40.0 33.0 36.5 0.3 693 chrX 10658287 intron,exon X11Lbeta +,CG2111 + chrX 10658634 intron,exon X11Lbeta +,CG2111 + chrX 10658980 intron,exon X11Lbeta +,CG2111 + chrX_12_10655001 chrX_10655001 D9 2558 chrX 2877018 2877073 chrX 10659325 10659375 17 7782303 26.0 38.0 32.0 0.5 7782357 chrX 2877018 intron kirre + chrX 6768196 exon CG14438 + chrX 10659375 intron,exon X11Lbeta +,CG2111 + chrX_17_6765001 chrX_6765001 D9 2559 chrX 10686027 10686079 chrX 10691189 10691241 roo 16 5162 1.5 8.0 4.8 2.8 5214 chrX 10686027 intron X11Lbeta + chrX 10688634 intron X11Lbeta + chrX 10691241 intron X11Lbeta + chrX_16_10685001 chrX_10685001 D9 2560 chrX 10694125 10694162 chrX 10694230 10694267 17 105 6.5 3.5 5.0 2.8 142 chrX 10694125 intron X11Lbeta + chrX 10694196 intron X11Lbeta + chrX 10694267 intron X11Lbeta + chrX_17_10690001 chrX_10690001 D9 2561 chrX 10719125 10719137 chrX 10719234 10719246 4 109 0.0 8.0 4.0 0.8 121 chrX 10719125 intron CG32676 - chrX 10719186 intron CG32676 - chrX 10719246 intron CG32676 - chrX_4_10715001 chrX_10715001 D9 2562 chrX 10731222 10731272 chrX 10731335 10731385 18 112 4.5 5.5 5.0 3.0 163 chrX 10731222 intron CG32676 - chrX 10731304 intron CG32676 - chrX 10731385 intron CG32676 - chrX_18_10730001 chrX_10730001 D9 2563 chrX 10772649 10772698 chrX 10772757 10772806 Tirant 44 107 10.5 5.5 8.0 4.9 157 chrX 10772649 intron CG15211 + chrX 10772728 intron CG15211 + chrX 10772806 intron CG15211 + chrX_44_10770001 chrX_10770001 D9 2564 chrX 10913343 10913345 chrX 10913442 10913450 4 103 1.0 19.5 10.2 0.4 107 chrX 10913343 intron CG43901 + chrX 10913396 intron CG43901 + chrX 10913450 intron CG43901 + chrX_4_10910001 chrX_10910001 D9 2565 chrX 10913348 10913352 chrX 10913437 10913457 4 100 0.0 17.5 8.8 0.4 109 chrX 10913348 intron CG43901 + chrX 10913402 intron CG43901 + chrX 10913457 intron CG43901 + chrX_4_10910001 chrX_10910001 D9 2566 chrX 10917909 10917919 chrX 10918012 10918027 16 106 35.5 20.0 27.8 0.6 118 chrX 10917909 exon CG43901 + chrX 10917968 exon CG43901 + chrX 10918027 exon CG43901 + chrX_16_10915001 chrX_10915001 D9 2567 chrX 10933907 10933942 chrX 10934020 10934055 15 113 0.0 6.0 3.0 3.8 148 chrX 10933907 intron Myo10A + chrX 10933981 intron Myo10A + chrX 10934055 intron Myo10A + chrX_15_10930001 chrX_10930001 D9 2568 chrX 10970792 10970837 chrX 10970921 10970966 6 129 7.5 2.5 5.0 1.0 174 chrX 10970792 intron CG42339 - chrX 10970879 intron CG42339 - chrX 10970966 intron CG42339 - chrX_6_10970001 chrX_10970001 D9 2569 chrX 11081656 11081706 chrX 11082609 11082658 7 952 1.5 3.0 2.2 2.2 1002 chrX 11081656 intron sev - chrX 11082157 intron sev - chrX 11082658 intron sev - chrX_7_11080001 chrX_11080001 D9 2570 chrX 11095978 11096019 chrX 11103105 11103146 HMS-Beagle 9 7124 6.0 7.0 6.5 1.2 7168 chrX 11095978 intergenic not near genes chrX 11099562 intergenic not near genes chrX 11103146 intron CG42249 + chrX_9_11095001 chrX_11095001 D9 2571 chrX 11142052 11142063 chrX 11142153 11142164 8 101 0.0 13.5 6.8 1.0 112 chrX 11142052 intergenic CG15199 -,CG15202 + chrX 11142108 intergenic CG15199 -,CG15202 + chrX 11142164 intergenic CG15199 -,CG15202 + chrX_8_11140001 chrX_11140001 D9 2572 chrX 11184221 11184279 chrX 11189325 11189380 flea 7 5102 7.5 7.0 7.2 0.9 5159 chrX 11184221 intergenic not near genes chrX 11186800 intergenic not near genes chrX 11189380 intergenic not near genes chrX_7_11185001 chrX_11185001 D9 2573 chrX 11190750 11190788 chrX 11190898 11190936 19 148 0.5 5.0 2.8 5.0 186 chrX 11190750 intergenic not near genes chrX 11190843 intergenic not near genes chrX 11190936 intergenic not near genes chrX_19_11190001 chrX_11190001 D9 2574 chrX 11194449 11194456 chrX 11201861 11201902 gypsy5 5 7439 13.5 18.0 15.8 0.3 7453 chrX 11194449 intergenic not near genes chrX 11198176 intergenic not near genes chrX 11201902 intergenic CG11106 + chrX_5_11195001 chrX_11195001 D9 2575 chrX 11205278 11205314 chrX 11205379 11205415 10 101 5.0 8.5 6.8 1.3 137 chrX 11205278 intergenic not near genes chrX 11205346 intergenic not near genes chrX 11205415 intergenic not near genes chrX_10_11205001 chrX_11205001 D9 2576 chrX 11214964 11215012 chrX 11215352 11215400 17 387 6.5 7.0 6.8 2.2 436 chrX 11214964 intergenic not near genes chrX 11215182 intergenic not near genes chrX 11215400 intergenic not near genes chrX_17_11215001 chrX_11215001 D9 2577 chrX 11268535 11268596 chrX 11270053 11270107 hopper2 37 1517 1.5 8.5 5.0 6.2 1572 chrX 11268535 intron CG44422 - chrX 11269321 intron CG44422 - chrX 11270107 intron CG44422 - chrX_37_11265001 chrX_11265001 D9 2578 chrX 11297695 11297724 chrX 11297819 11297848 20 124 10.0 14.5 12.2 1.5 153 chrX 11297695 intron CG44422 - chrX 11297772 intron CG44422 - chrX 11297848 exon CG44422 - chrX_20_11295001 chrX_11295001 D9 2579 chrX 11312046 11312086 chrX 11319424 11319464 Stalker2 17 7378 5.5 7.5 6.5 2.3 7418 chrX 11312046 intergenic not near genes chrX 11315755 intergenic not near genes chrX 11319464 intergenic not near genes chrX_17_11315001 chrX_11315001 D9 2580 chrX 11327181 11327229 chrX 11327277 11327330 11 100 7.0 4.0 5.5 1.7 149 chrX 11327181 intron CG1657 + chrX 11327256 intron CG1657 + chrX 11327330 intron CG1657 + chrX_11_11325001 chrX_11325001 D9 2581 chrX 11338491 11338497 chrX 11338610 11338616 4 119 0.0 10.0 5.0 0.7 125 chrX 11338491 intron Kap3 - chrX 11338554 intron Kap3 - chrX 11338616 intron Kap3 - chrX_4_11335001 chrX_11335001 D9 2582 chrX 11360473 11360486 chrX 11360686 11360699 6 212 7.5 6.5 7.0 0.8 226 chrX 11360473 3` UTR Pa1 + chrX 11360586 3` UTR Pa1 + chrX 11360699 3` UTR Pa1 + chrX_6_11360001 chrX_11360001 D9 2583 chrX 11379754 11379790 chrX 11379924 11379959 13 169 2.0 5.0 3.5 2.9 205 chrX 11379754 intron dlg1 + chrX 11379856 intron dlg1 + chrX 11379959 intron dlg1 + chrX_13_11375001 chrX_11375001 D9 2584 chrX 2873132 2873160 chrX 11387650 11387676 roo 9 8514516 15.0 26.0 20.5 0.4 8514544 chrX 2873132 intron kirre + chrX 7130404 intergenic not near genes chrX 11387676 intron dlg1 + chrX_9_7130001 chrX_7130001 D9 2585 chrX 11499086 11499129 chrX 11499189 11499231 4 102 4.0 1.5 2.8 1.1 145 chrX 11499086 intron Drak + chrX 11499158 intron Drak + chrX 11499231 intron Drak + chrX_4_11495001 chrX_11495001 D9 2586 chrX 11535021 11535040 chrX 11541515 11541535 Burdock 8 6494 10.0 4.5 7.2 1.0 6514 chrX 11535021 intron Drak + chrX 11538278 intron Drak + chrX 11541535 intron Drak + chrX_8_11535001 chrX_11535001 D9 2587 chrX 11633400 11633446 chrX 11640479 11640525 297 18 7079 4.0 5.0 4.5 3.3 7125 chrX 11633400 intron Ptp10D + chrX 11636962 intron Ptp10D + chrX 11640525 intron Ptp10D + chrX_18_11635001 chrX_11635001 D9 2588 chrX 11761989 11762003 chrX 11762091 11762107 9 104 7.0 8.0 7.5 1.1 118 chrX 11761989 intron m + chrX 11762048 intron m + chrX 11762107 intron m + chrX_9_11760001 chrX_11760001 D9 2589 chrX 11804659 11804686 chrX 11804788 11804815 5 129 3.5 3.0 3.2 1.2 156 chrX 11804659 intron Hsc70-3 - chrX 11804737 intron Hsc70-3 - chrX 11804815 intron Hsc70-3 - chrX_5_11800001 chrX_11800001 D9 2590 chrX 11922338 11922380 chrX 11922496 11922538 8 158 3.0 3.5 3.2 1.9 200 chrX 11922338 exon Sclp - chrX 11922438 intron Sclp - chrX 11922538 intron Sclp - chrX_8_11920001 chrX_11920001 D9 2591 chrX 12094014 12094064 chrX 12094131 12094181 10 117 0.5 6.0 3.2 2.4 167 chrX 12094014 intron,intron CR43960 +,Ten-a + chrX 12094098 intron,intron CR43960 +,Ten-a + chrX 12094181 intron,intron CR43960 +,Ten-a + chrX_10_12090001 chrX_12090001 D9 2592 chrX 12168117 12168151 chrX 12173584 12173618 I-element 8 5467 6.0 3.0 4.5 1.5 5501 chrX 12168117 intron Ten-a + chrX 12170868 intron Ten-a + chrX 12173618 intron Ten-a + chrX_8_12170001 chrX_12170001 D9 2593 chrX 12184273 12184283 chrX 12184371 12184393 6 108 8.5 16.0 12.2 0.5 120 chrX 12184273 intron Ten-a + chrX 12184333 intron Ten-a + chrX 12184393 intron Ten-a + chrX_6_12180001 chrX_12180001 D9 2594 chrX 12191572 12191582 chrX 12191685 12191695 4 113 2.5 3.5 3.0 1.0 123 chrX 12191572 intron Ten-a + chrX 12191634 intron Ten-a + chrX 12191695 intron Ten-a + chrX_4_12190001 chrX_12190001 D9 2595 chrX 12245665 12245715 chrX 12245770 12245823 8 107 2.5 1.5 2.0 2.7 158 chrX 12245665 intron Ten-a + chrX 12245744 intron Ten-a + chrX 12245823 intron Ten-a + chrX_8_12245001 chrX_12245001 D9 2596 chrX 12277156 12277213 chrX 12277272 12277328 10 116 0.5 2.0 1.2 4.5 172 chrX 12277156 intron Ten-a + chrX 12277242 intron Ten-a + chrX 12277328 intron Ten-a + chrX_10_12275001 chrX_12275001 D9 2597 chrX 12282972 12282988 chrX 12283098 12283114 6 126 11.0 5.0 8.0 0.7 142 chrX 12282972 intron Ten-a + chrX 12283043 intron Ten-a + chrX 12283114 intron Ten-a + chrX_6_12280001 chrX_12280001 D9 2598 chrX 12295298 12295326 chrX 12295399 12295426 11 101 5.0 5.0 5.0 1.8 128 chrX 12295298 exon Ten-a + chrX 12295362 intron Ten-a + chrX 12295426 intron Ten-a + chrX_11_12295001 chrX_12295001 D9 2599 chrX 12348375 12348387 chrX 12348468 12348489 6 100 11.0 7.0 9.0 0.6 114 chrX 12348375 intergenic not near genes chrX 12348432 intergenic not near genes chrX 12348489 intergenic not near genes chrX_6_12345001 chrX_12345001 D9 2600 chrX 12381855 12381897 chrX 12385782 12385824 flea 15 3927 1.0 6.0 3.5 3.3 3969 chrX 12381855 intergenic not near genes chrX 12383840 intergenic not near genes chrX 12385824 intergenic not near genes chrX_15_12380001 chrX_12380001 D9 2601 chrX 12430926 12430962 chrX 12431029 12431064 14 102 5.0 0.0 2.5 4.0 138 chrX 12430926 intergenic not near genes chrX 12430995 intergenic not near genes chrX 12431064 intergenic not near genes chrX_14_12430001 chrX_12430001 D9 2602 chrX 12440382 12440402 chrX 12440488 12440509 4 107 0.0 4.0 2.0 1.3 127 chrX 12440382 intron Pkcdelta + chrX 12440446 intron Pkcdelta + chrX 12440509 intron Pkcdelta + chrX_4_12440001 chrX_12440001 D9 2603 chrX 12528087 12528137 chrX 12528193 12528243 9 106 2.0 3.5 2.8 2.4 156 chrX 12528087 intron CG43921 - chrX 12528165 intron CG43921 - chrX 12528243 intron CG43921 - chrX_9_12525001 chrX_12525001 D9 2604 chrX 12533770 12533814 chrX 12533872 12533915 7 102 0.5 1.5 1.0 3.5 145 chrX 12533770 intron CG43921 - chrX 12533842 intron CG43921 - chrX 12533915 intron CG43921 - chrX_7_12530001 chrX_12530001 D9 2605 chrX 12557132 12557160 chrX 12557233 12557261 10 101 8.0 6.5 7.2 1.2 129 chrX 12557132 intron CG43921 - chrX 12557196 intron CG43921 - chrX 12557261 intron CG43921 - chrX_10_12555001 chrX_12555001 D9 2606 chrX 12557453 12557473 chrX 12557559 12557579 4 104 1.0 0.0 0.5 2.7 126 chrX 12557453 intron CG43921 - chrX 12557516 intron CG43921 - chrX 12557579 intron CG43921 - chrX_4_12555001 chrX_12555001 D9 2607 chrX 12701183 12701193 chrX 12701289 12701299 4 106 3.0 4.5 3.8 0.8 116 chrX 12701183 intron Smr - chrX 12701241 intron Smr - chrX 12701299 intron Smr - chrX_4_12700001 chrX_12700001 D9 2608 chrX 12728696 12728728 chrX 12728803 12728834 4 107 0.5 0.5 0.5 2.7 138 chrX 12728696 intron,intron Smr -,CR43963 - chrX 12728765 intron,intron Smr -,CR43963 - chrX 12728834 intron,intron Smr -,CR43963 - chrX_4_12725001 chrX_12725001 D9 2609 chrX 12752259 12752305 chrX 12752371 12752416 22 112 3.0 4.5 3.8 4.6 157 chrX 12752259 5` UTR CR44619 + chrX 12752338 5` UTR CR44619 + chrX 12752416 5` UTR CR44619 + chrX_22_12750001 chrX_12750001 D9 2610 chrX 12808467 12808476 chrX 12808583 12808591 4 116 5.0 9.0 7.0 0.5 124 chrX 12808467 intron Pde9 - chrX 12808529 intron Pde9 - chrX 12808591 intron Pde9 - chrX_4_12805001 chrX_12805001 D9 2611 chrX 12971662 12971692 chrX 12971764 12971794 18 102 10.0 5.0 7.5 2.1 132 chrX 12971662 intron,exon CR43636 -,CG15721 + chrX 12971728 intron,exon CR43636 -,CG15721 + chrX 12971794 intron,exon CR43636 -,CG15721 + chrX_18_12970001 chrX_12970001 D9 2612 chrX 12977051 12977063 chrX 12977152 12977164 7 101 0.0 5.5 2.8 1.8 113 chrX 12977051 intergenic not near genes chrX 12977108 intergenic not near genes chrX 12977164 intergenic not near genes chrX_7_12975001 chrX_12975001 D9 2613 chrX 12985124 12985167 chrX 12985227 12985268 6 108 0.0 2.5 1.2 2.7 144 chrX 12985124 intergenic CG32643 + chrX 12985196 intergenic CG32643 + chrX 12985268 intergenic CG32643 + chrX_6_12985001 chrX_12985001 D9 2614 chrX 13104053 13104115 chrX 13104166 13104221 6 107 0.0 0.0 0.0 6.0 168 chrX 13104053 intron CG43313 - chrX 13104137 intron CG43313 - chrX 13104221 intron CG43313 - chrX_6_13100001 chrX_13100001 D9 2615 chrX 13146583 13146630 chrX 13146694 13146743 5 112 1.0 0.0 0.5 3.3 160 chrX 13146583 intron CG32645 + chrX 13146663 intron CG32645 + chrX 13146743 intron CG32645 + chrX_5_13145001 chrX_13145001 D9 2616 chrX 13168546 13168566 chrX 13168672 13168692 4 126 2.5 2.5 2.5 1.1 146 chrX 13168546 intron CG34411 - chrX 13168619 intron CG34411 - chrX 13168692 intron CG34411 - chrX_4_13165001 chrX_13165001 D9 2617 chrX 13340848 13340889 chrX 13340958 13340999 15 109 1.5 5.0 3.2 3.6 151 chrX 13340848 3` UTR CG15747 + chrX 13340924 3` UTR CG15747 + chrX 13340999 3` UTR CG15747 + chrX_15_13340001 chrX_13340001 D9 2618 chrX 13354928 13354945 chrX 13355030 13355043 8 101 3.0 0.0 1.5 3.2 115 chrX 13354928 intergenic not near genes chrX 13354986 intergenic not near genes chrX 13355043 intergenic not near genes chrX_8_13350001 chrX_13350001 D9 2619 chrX 13374814 13374858 chrX 13374919 13374963 8 105 4.5 0.5 2.5 2.3 149 chrX 13374814 intron CG1640 + chrX 13374888 intron CG1640 + chrX 13374963 intron CG1640 + chrX_8_13370001 chrX_13370001 D9 2620 chrX 13401464 13401511 chrX 13401841 13401888 jockey 4 377 3.0 2.0 2.5 1.1 424 chrX 13401464 intergenic CG1673 +,CG12725 - chrX 13401676 intergenic CG12725 -,CG1673 + chrX 13401888 3` UTR CG12725 - chrX_4_13400001 chrX_13400001 D9 2621 chrX 13429442 13429481 chrX 13430616 13430655 jockey 5 1169 1.0 4.5 2.8 1.3 1213 chrX 13429442 intergenic not near genes chrX 13430048 intergenic not near genes chrX 13430655 intergenic not near genes chrX_5_13430001 chrX_13430001 D9 2622 chrX 13443388 13443418 chrX 13443488 13443519 18 101 12.0 12.5 12.2 1.4 131 chrX 13443388 intergenic not near genes chrX 13443454 intergenic not near genes chrX 13443519 intergenic not near genes chrX_18_13440001 chrX_13440001 D9 2623 chrX 13463632 13463675 chrX 13469234 13469277 mdg3 5 5602 3.5 2.0 2.8 1.3 5645 chrX 13463632 intron Neto + chrX 13466454 intron Neto + chrX 13469277 intron Neto + chrX_5_13465001 chrX_13465001 D9 2624 chrX 13493179 13493220 chrX 13493282 13493323 10 103 2.0 2.5 2.2 3.1 144 chrX 13493179 intron Neto + chrX 13493251 intron Neto + chrX 13493323 intron Neto + chrX_10_13490001 chrX_13490001 D9 2625 chrX 13530095 13530139 chrX 13534486 13534530 11 4391 30.5 41.0 35.8 0.3 4435 chrX 13530095 exon CG44428 - chrX 13532312 intergenic not near genes chrX 13534530 exon CG15756 + chrX_11_13530001 chrX_13530001 D9 2626 chrX 13574922 13574938 chrX 13575038 13575046 6 114 13.5 4.5 9.0 0.6 124 chrX 13574922 intron Tango13 + chrX 13574984 intron Tango13 + chrX 13575046 intron Tango13 + chrX_6_13570001 chrX_13570001 D9 2627 chrX 13577730 13577776 chrX 13577989 13578037 8 259 2.5 4.0 3.2 1.9 307 chrX 13577730 intron Tango13 + chrX 13577884 intron Tango13 + chrX 13578037 intron Tango13 + chrX_8_13575001 chrX_13575001 D9 2628 chrX 13734070 13734107 chrX 13734191 13734228 24 120 4.5 6.0 5.2 3.9 158 chrX 13734070 intron g - chrX 13734149 intron g - chrX 13734228 intron g - chrX_24_13730001 chrX_13730001 D9 2629 chrX 13739085 13739129 chrX 13739183 13739227 13 100 4.5 1.0 2.8 3.4 142 chrX 13739085 intron,3` UTR Grip91 -,CG11134 + chrX 13739156 intron,3` UTR Grip91 -,CG11134 + chrX 13739227 intron Grip91 - chrX_13_13735001 chrX_13735001 D9 2630 chrX 13821446 13821471 chrX 13821548 13821572 5 102 3.5 5.5 4.5 0.9 126 chrX 13821446 intron Clic - chrX 13821509 intron Clic - chrX 13821572 intron Clic - chrX_5_13820001 chrX_13820001 D9 2631 chrX 13937954 13937991 chrX 13941250 13941287 I-element 8 3296 1.5 1.5 1.5 3.2 3333 chrX 13937954 intron mamo - chrX 13939620 intron mamo - chrX 13941287 intron mamo - chrX_8_13935001 chrX_13935001 D9 2632 chrX 14105005 14105050 chrX 14114181 14114226 roo 14 9176 4.0 5.0 4.5 2.5 9221 chrX 14105005 intergenic not near genes chrX 14109616 intergenic not near genes chrX 14114226 5` UTR CR44657 + chrX_14_14105001 chrX_14105001 D9 2633 chrX 14131455 14131516 chrX 14131567 14131604 19 105 8.5 3.5 6.0 2.7 149 chrX 14131455 intergenic not near genes chrX 14131530 intergenic not near genes chrX 14131604 intergenic not near genes chrX_19_14130001 chrX_14130001 D9 2634 chrX 14185281 14185318 chrX 14185405 14185419 4 133 0.5 7.5 4.0 0.8 138 chrX 14185281 exon CG32603 + chrX 14185350 exon CG32603 + chrX 14185419 exon CG32603 + chrX_4_14185001 chrX_14185001 D9 2635 chrX 14214533 14214575 chrX 14214865 14214905 13 331 5.5 2.5 4.0 2.6 372 chrX 14214533 intron l(1)G0007 + chrX 14214719 intron l(1)G0007 + chrX 14214905 intron l(1)G0007 + chrX_13_14210001 chrX_14210001 D9 2636 chrX 14220008 14220026 chrX 14220109 14220126 5 101 1.5 3.5 2.5 1.4 118 chrX 14220008 intron l(1)G0007 + chrX 14220067 intron l(1)G0007 + chrX 14220126 intron l(1)G0007 + chrX_5_14220001 chrX_14220001 D9 2637 chrX 14296433 14296487 chrX 14296534 14296588 5 101 3.5 5.0 4.2 1.0 155 chrX 14296433 intergenic not near genes chrX 14296510 intergenic not near genes chrX 14296588 intergenic not near genes chrX_5_14295001 chrX_14295001 D9 2638 chrX 14366518 14366542 chrX 14366623 14366647 4 105 1.5 1.0 1.2 1.8 129 chrX 14366518 intron dpr8 + chrX 14366582 intron dpr8 + chrX 14366647 intron dpr8 + chrX_4_14365001 chrX_14365001 D9 2639 chrX 14381391 14381404 chrX 14381567 14381583 6 178 4.5 0.0 2.2 1.9 192 chrX 14381391 intron,3` UTR dpr8 +,betaNACtes4 + chrX 14381487 intron dpr8 + chrX 14381583 intron dpr8 + chrX_6_14380001 chrX_14380001 D9 2640 chrX 14383940 14383948 chrX 14384049 14384054 4 108 10.5 14.0 12.2 0.3 114 chrX 14383940 intron dpr8 + chrX 14383997 intron dpr8 + chrX 14384054 intron dpr8 + chrX_4_14380001 chrX_14380001 D9 2641 chrX 14414213 14414227 chrX 14414315 14414329 5 101 2.5 3.0 2.8 1.3 116 chrX 14414213 intron dpr8 + chrX 14414271 intron dpr8 + chrX 14414329 intron dpr8 + chrX_5_14410001 chrX_14410001 D9 2642 chrX 14484943 14484996 chrX 14485057 14485110 5 114 0.0 9.0 4.5 0.9 167 chrX 14484943 intergenic not near genes chrX 14485026 intergenic not near genes chrX 14485110 intergenic not near genes chrX_5_14485001 chrX_14485001 D9 2643 chrX 14597729 14597749 chrX 14597830 14597851 5 102 3.5 6.5 5.0 0.8 122 chrX 14597729 intron CG9413 - chrX 14597790 intron CG9413 - chrX 14597851 intron CG9413 - chrX_5_14595001 chrX_14595001 D9 2644 chrX 14636444 14636484 chrX 14641910 14641950 I-element 13 5466 5.0 4.0 4.5 2.4 5506 chrX 14636444 intron NetA - chrX 14639197 intron NetA - chrX 14641950 intron NetA - chrX_13_14635001 chrX_14635001 D9 2645 chrX 14714028 14714061 chrX 14714135 14714168 7 107 3.0 3.0 3.0 1.8 140 chrX 14714028 intron NetB - chrX 14714098 intron NetB - chrX 14714168 intron NetB - chrX_7_14710001 chrX_14710001 D9 2646 chrX 14778023 14778050 chrX 14782845 14782872 Doc 7 4822 0.5 4.5 2.5 2.0 4849 chrX 14778023 intergenic CG5347 + chrX 14780448 intergenic not near genes chrX 14782872 intergenic Ag5r2 - chrX_7_14780001 chrX_14780001 D9 2647 chrX 14818741 14818791 chrX 14823970 14824020 copia 15 5229 5.0 5.5 5.2 2.4 5279 chrX 14818741 intron rut - chrX 14821380 intron rut - chrX 14824020 intron rut - chrX_15_14820001 chrX_14820001 D9 2648 chrX 14936843 14936873 chrX 14946125 14946155 roo 5 9282 3.5 1.0 2.2 1.6 9312 chrX 14936843 intron pdgy - chrX 14941499 intron pdgy - chrX 14946155 intron pdgy - chrX_5_14940001 chrX_14940001 D9 2649 chrX 15190593 15190622 chrX 15190701 15190730 6 108 1.5 1.0 1.2 2.7 137 chrX 15190593 intergenic not near genes chrX 15190662 intergenic not near genes chrX 15190730 intergenic not near genes chrX_6_15190001 chrX_15190001 D9 2650 chrX 15217258 15217309 chrX 15217367 15217414 21 108 7.0 4.0 5.5 3.2 156 chrX 15217258 intergenic not near genes chrX 15217336 intergenic not near genes chrX 15217414 intergenic not near genes chrX_21_15215001 chrX_15215001 D9 2651 chrX 15248243 15248289 chrX 15248343 15248390 15 101 6.0 6.5 6.2 2.1 147 chrX 15248243 intergenic not near genes chrX 15248316 intergenic not near genes chrX 15248390 intergenic not near genes chrX_15_15245001 chrX_15245001 D9 2652 chrX 15268857 15268893 chrX 15268962 15268998 9 105 8.0 4.0 6.0 1.3 141 chrX 15268857 intergenic not near genes chrX 15268928 intergenic not near genes chrX 15268998 intergenic not near genes chrX_9_15265001 chrX_15265001 D9 2653 chrX 15273683 15273731 chrX 15274874 15274915 1360 29 1191 5.5 10.0 7.8 3.3 1232 chrX 15273683 intergenic not near genes chrX 15274299 intergenic not near genes chrX 15274915 intergenic not near genes chrX_29_15270001 chrX_15270001 D9 2654 chrX 15365765 15365820 chrX 15365871 15365926 20 106 3.5 0.0 1.8 7.1 161 chrX 15365765 intron acj6 - chrX 15365846 intron acj6 - chrX 15365926 intron acj6 - chrX_20_15365001 chrX_15365001 D9 2655 chrX 15369805 15369858 chrX 15369913 15369965 11 108 3.5 4.0 3.8 2.3 160 chrX 15369805 intron acj6 - chrX 15369885 intron acj6 - chrX 15369965 intron acj6 - chrX_11_15365001 chrX_15365001 D9 2656 chrX 15413036 15413076 chrX 15417363 15417403 Juan 18 4327 7.5 5.5 6.5 2.4 4367 chrX 15413036 intron Cngl - chrX 15415220 intron Cngl - chrX 15417403 intron Cngl - chrX_18_15415001 chrX_15415001 D9 2657 chrX 15424142 15424189 chrX 15424365 15424412 10 222 1.5 4.5 3.0 2.5 270 chrX 15424142 intron Cngl - chrX 15424277 intron Cngl - chrX 15424412 intron Cngl - chrX_10_15420001 chrX_15420001 D9 2658 chrX 15435688 15435703 chrX 15436143 15436161 rover 9 457 0.5 11.0 5.8 1.3 473 chrX 15435688 intron Cngl - chrX 15435924 intron Cngl - chrX 15436161 intron Cngl - chrX_9_15435001 chrX_15435001 D9 2659 chrX 15536687 15536708 chrX 15536787 15536810 12 101 9.5 17.5 13.5 0.8 123 chrX 15536687 intron Ac13E - chrX 15536748 intron Ac13E - chrX 15536810 intron Ac13E - chrX_12_15535001 chrX_15535001 D9 2660 chrX 15543243 15543294 chrX 15543350 15543399 19 105 7.0 2.0 4.5 3.5 156 chrX 15543243 intron Ac13E - chrX 15543321 intron Ac13E - chrX 15543399 intron Ac13E - chrX_19_15540001 chrX_15540001 D9 2661 chrX 15589434 15589453 chrX 15589638 15589657 9 204 5.5 11.0 8.2 1.0 223 chrX 15589434 intron CG9220 - chrX 15589546 intron CG9220 - chrX 15589657 exon CG9220 - chrX_9_15585001 chrX_15585001 D9 2662 chrX 15591301 15591356 chrX 15591574 15591627 22 272 25.5 38.5 32.0 0.7 326 chrX 15591301 intron CG9220 - chrX 15591464 intron CG9220 - chrX 15591627 intron CG9220 - chrX_22_15590001 chrX_15590001 D9 2663 chrX 15681374 15681411 chrX 15681477 15681515 13 106 1.0 2.0 1.5 5.2 141 chrX 15681374 intergenic not near genes chrX 15681444 intergenic not near genes chrX 15681515 intergenic not near genes chrX_13_15680001 chrX_15680001 D9 2664 chrX 15893183 15893235 chrX 15893355 15893407 10 172 5.0 1.0 3.0 2.5 224 chrX 15893183 intron shi + chrX 15893295 intron shi + chrX 15893407 intron shi + chrX_10_15890001 chrX_15890001 D9 2665 chrX 16004392 16004431 chrX 16004503 16004542 6 111 3.5 3.0 3.2 1.4 150 chrX 16004392 intron vap - chrX 16004467 intron vap - chrX 16004542 intron vap - chrX_6_16000001 chrX_16000001 D9 2666 chrX 16100537 16100589 chrX 16100641 16100694 4 104 0.0 3.0 1.5 1.6 157 chrX 16100537 intron,intron CG42353 -,CG42354 - chrX 16100616 intron,intron CG42353 -,CG42354 - chrX 16100694 intron,intron CG42353 -,CG42354 - chrX_4_16100001 chrX_16100001 D9 2667 chrX 16124322 16124329 chrX 16124422 16124432 6 102 9.5 14.0 11.8 0.5 110 chrX 16124322 intron disco-r - chrX 16124377 intron disco-r - chrX 16124432 intron disco-r - chrX_6_16120001 chrX_16120001 D9 2668 chrX 16156104 16156133 chrX 16156205 16156234 7 99 9.0 3.5 6.2 1.0 130 chrX 16156104 intergenic not near genes chrX 16156169 intergenic not near genes chrX 16156234 intergenic not near genes chrX_7_16155001 chrX_16155001 D9 2669 chrX 16222766 16222806 chrX 16231141 16231181 roo 4 8375 0.5 1.5 1.0 2.0 8415 chrX 16222766 intergenic not near genes chrX 16226974 intergenic not near genes chrX 16231181 intergenic not near genes chrX_4_16225001 chrX_16225001 D9 2670 chrX 16273806 16273855 chrX 16276704 16276753 18 2899 20.5 45.5 33.0 0.5 2947 chrX 16273806 intron,3` UTR kat80 -,Mfe2 + chrX 16275280 intron kat80 - chrX 16276753 exon Prosalpha4 + chrX_18_16275001 chrX_16275001 D9 2671 chrX 16295502 16295527 chrX 16295611 16295636 4 109 4.0 0.0 2.0 1.3 134 chrX 16295502 intron CG9911 - chrX 16295569 intron CG9911 - chrX 16295636 intron CG9911 - chrX_4_16295001 chrX_16295001 D9 2672 chrX 16329434 16329449 chrX 16329542 16329557 11 108 0.0 23.0 11.5 0.9 123 chrX 16329434 intron CG9919 - chrX 16329496 intron CG9919 - chrX 16329557 exon CG9919 - chrX_11_16325001 chrX_16325001 D9 2673 chrX 16408105 16408112 chrX 16408207 16408214 4 102 12.0 9.5 10.8 0.3 109 chrX 16408105 intron CG4301 + chrX 16408160 intron CG4301 + chrX 16408214 intron CG4301 + chrX_4_16405001 chrX_16405001 D9 2674 chrX 16492627 16492674 chrX 16498229 16498276 mdg3 12 5602 2.0 6.5 4.2 2.3 5649 chrX 16492627 intron para - chrX 16495452 intron para - chrX 16498276 exon para - chrX_12_16495001 chrX_16495001 D9 2675 chrX 16519926 16519965 chrX 16520035 16520076 5 111 1.5 4.5 3.0 1.2 150 chrX 16519926 intron para - chrX 16520001 intron para - chrX 16520076 intron para - chrX_5_16520001 chrX_16520001 D9 2676 chrX 16529377 16529442 chrX 16529521 16529578 8 139 0.0 6.5 3.2 1.9 201 chrX 16529377 intron para - chrX 16529478 intron para - chrX 16529578 intron para - chrX_8_16525001 chrX_16525001 D9 2677 chrX 16724520 16724561 chrX 16724752 16724793 6 232 1.5 3.0 2.2 1.9 273 chrX 16724520 intron CG32572 + chrX 16724656 intron CG32572 + chrX 16724793 intron CG32572 + chrX_6_16720001 chrX_16720001 D9 2678 chrX 16785252 16785291 chrX 16785378 16785420 9 128 3.0 3.5 3.2 2.1 168 chrX 16785252 3` UTR CG9609 - chrX 16785336 3` UTR CG9609 - chrX 16785420 3` UTR CG9609 - chrX_9_16785001 chrX_16785001 D9 2679 chrX 16821215 16821264 chrX 16821320 16821369 11 105 2.5 1.5 2.0 3.7 154 chrX 16821215 intron CG4829 + chrX 16821292 intron CG4829 + chrX 16821369 intron CG4829 + chrX_11_16820001 chrX_16820001 D9 2680 chrX 16936012 16936026 chrX 16936452 16936469 jockey 7 442 2.5 9.5 6.0 1.0 457 chrX 16936012 intron CG4928 + chrX 16936240 intron CG4928 + chrX 16936469 intron CG4928 + chrX_7_16935001 chrX_16935001 D9 2681 chrX 17011944 17011997 chrX 17012052 17012104 11 107 2.5 4.0 3.2 2.6 160 chrX 17011944 intron CG45002 - chrX 17012024 intron CG45002 - chrX 17012104 intron CG45002 - chrX_11_17010001 chrX_17010001 D9 2682 chrX 17063157 17063203 chrX 17063269 17063315 7 112 4.5 2.0 3.2 1.7 158 chrX 17063157 intron CG45002 - chrX 17063236 intron CG45002 - chrX 17063315 intron CG45002 - chrX_7_17060001 chrX_17060001 D9 2683 chrX 17122628 17122671 chrX 17122744 17122785 9 115 2.5 3.5 3.0 2.2 157 chrX 17122628 intron CG5004 + chrX 17122706 intron CG5004 + chrX 17122785 intron CG5004 + chrX_9_17120001 chrX_17120001 D9 2684 chrX 17195212 17195236 chrX 17200321 17200345 flea 4 5106 2.5 1.0 1.8 1.4 5133 chrX 17195212 3` UTR baz + chrX 17197778 3` UTR baz + chrX 17200345 3` UTR baz + chrX_4_17195001 chrX_17195001 D9 2685 chrX 17205829 17205857 chrX 17205944 17205972 5 115 1.5 5.5 3.5 1.1 143 chrX 17205829 intergenic not near genes chrX 17205900 intergenic not near genes chrX 17205972 intergenic CG32564 + chrX_5_17205001 chrX_17205001 D9 2686 chrX 17221809 17221858 chrX 17221920 17221969 7 111 1.0 2.5 1.8 2.5 160 chrX 17221809 intron CG5172 + chrX 17221889 intron CG5172 + chrX 17221969 intron CG5172 + chrX_7_17220001 chrX_17220001 D9 2687 chrX 17229932 17229950 chrX 17230060 17230078 6 128 5.0 3.0 4.0 1.2 146 chrX 17229932 intergenic CG10597 - chrX 17230005 intergenic CG10597 - chrX 17230078 intergenic CG10597 - chrX_6_17230001 chrX_17230001 D9 2688 chrX 17282851 17282882 chrX 17282954 17282985 13 103 11.0 0.5 5.8 1.9 134 chrX 17282851 intron CG5445 + chrX 17282918 5` UTR CG5445 + chrX 17282985 intron CG5445 + chrX_13_17280001 chrX_17280001 D9 2689 chrX 17316348 17316382 chrX 17316457 17316489 5 109 1.5 0.0 0.8 2.8 141 chrX 17316348 intron B-H2 + chrX 17316418 intron B-H2 + chrX 17316489 intron B-H2 + chrX_5_17315001 chrX_17315001 D9 2690 chrX 17343359 17343400 chrX 17343469 17343510 6 110 0.0 3.5 1.8 2.1 151 chrX 17343359 intergenic not near genes chrX 17343434 intergenic not near genes chrX 17343510 intergenic not near genes chrX_6_17340001 chrX_17340001 D9 2691 chrX 17352576 17352620 chrX 17352694 17352748 7 126 0.0 3.5 1.8 2.5 172 chrX 17352576 intergenic not near genes chrX 17352662 intergenic not near genes chrX 17352748 intergenic not near genes chrX_7_17350001 chrX_17350001 D9 2692 chrX 17357527 17357534 chrX 17357646 17357653 5 119 2.5 5.0 3.8 1.0 126 chrX 17357527 intergenic not near genes chrX 17357590 intergenic not near genes chrX 17357653 intergenic not near genes chrX_5_17355001 chrX_17355001 D9 2693 chrX 17431329 17431339 chrX 17431695 17431705 jockey 8 366 15.5 6.5 11.0 0.7 376 chrX 17431329 intron CG12994 - chrX 17431517 intron CG12994 - chrX 17431705 intron CG12994 - chrX_8_17430001 chrX_17430001 D9 2694 chrX 17435727 17435783 chrX 17435828 17435882 9 101 1.5 3.0 2.2 2.8 155 chrX 17435727 intron CG12994 - chrX 17435804 intron CG12994 - chrX 17435882 intron CG12994 - chrX_9_17435001 chrX_17435001 D9 2695 chrX 17476441 17476491 chrX 17476543 17476593 25 101 3.5 6.0 4.8 4.3 152 chrX 17476441 intron CG43658 - chrX 17476517 intron CG43658 - chrX 17476593 intron CG43658 - chrX_25_17475001 chrX_17475001 D9 2696 chrX 17536824 17536869 chrX 17536931 17536977 5 107 0.0 2.5 1.2 2.3 153 chrX 17536824 intron CG43658 - chrX 17536900 intron CG43658 - chrX 17536977 intron CG43658 - chrX_5_17535001 chrX_17535001 D9 2697 chrX 17544995 17545032 chrX 17545101 17545139 14 107 3.5 2.5 3.0 3.5 144 chrX 17544995 intron CG43658 - chrX 17545067 intron CG43658 - chrX 17545139 intron CG43658 - chrX_14_17545001 chrX_17545001 D9 2698 chrX 17556921 17556931 chrX 17557442 17557455 mdg1 5 523 13.0 4.0 8.5 0.5 534 chrX 17556921 intron CG43658 - chrX 17557188 intron CG43658 - chrX 17557455 intron CG43658 - chrX_5_17555001 chrX_17555001 D9 2699 chrX 17716568 17716599 chrX 17716675 17716711 11 111 4.5 7.5 6.0 1.6 143 chrX 17716568 intron CG42684 + chrX 17716640 intron CG42684 + chrX 17716711 intron CG42684 + chrX_11_17715001 chrX_17715001 D9 2700 chrX 17740356 17740369 chrX 17740458 17740469 5 101 11.0 11.5 11.2 0.4 113 chrX 17740356 intron CG42684 + chrX 17740412 intron CG42684 + chrX 17740469 intron CG42684 + chrX_5_17740001 chrX_17740001 D9 2701 chrX 17740370 17740405 chrX 17740455 17740505 13 99 5.5 11.5 8.5 1.4 135 chrX 17740370 intron CG42684 + chrX 17740438 intron CG42684 + chrX 17740505 intron CG42684 + chrX_13_17740001 chrX_17740001 D9 2702 chrX 17766331 17766377 chrX 17766454 17766500 15 123 6.5 0.5 3.5 3.3 169 chrX 17766331 intergenic not near genes chrX 17766416 intergenic not near genes chrX 17766500 intergenic not near genes chrX_15_17765001 chrX_17765001 D9 2703 chrX 17771268 17771332 chrX 17771374 17771436 15 104 3.5 2.0 2.8 3.9 168 chrX 17771268 intron unc-4 + chrX 17771352 intron unc-4 + chrX 17771436 intron unc-4 + chrX_15_17770001 chrX_17770001 D9 2704 chrX 17784460 17784476 chrX 17784559 17784577 4 100 0.0 2.0 1.0 2.0 117 chrX 17784460 intergenic not near genes chrX 17784518 intergenic not near genes chrX 17784577 intergenic not near genes chrX_4_17780001 chrX_17780001 D9 2705 chrX 17792931 17792975 chrX 17796254 17796298 flea 9 3322 4.0 4.0 4.0 1.8 3367 chrX 17792931 intron OdsH + chrX 17794614 intron OdsH + chrX 17796298 intron OdsH + chrX_9_17790001 chrX_17790001 D9 2706 chrX 17879629 17879682 chrX 17879760 17879813 16 131 4.5 2.0 3.2 3.8 184 chrX 17879629 intron mnb - chrX 17879721 intron mnb - chrX 17879813 intron mnb - chrX_16_17875001 chrX_17875001 D9 2707 chrX 18175473 18175477 chrX 18175583 18175587 4 110 0.0 7.5 3.8 0.8 114 chrX 18175473 intergenic not near genes chrX 18175530 intergenic not near genes chrX 18175587 intergenic not near genes chrX_4_18175001 chrX_18175001 D9 2708 chrX 18179539 18179593 chrX 18179806 18179860 17 265 2.5 0.5 1.5 6.8 321 chrX 18179539 intron Frq2 + chrX 18179700 intron Frq2 + chrX 18179860 intron Frq2 + chrX_17_18175001 chrX_18175001 D9 2709 chrX 18194043 18194099 chrX 18194601 18194652 BS 13 559 5.0 4.0 4.5 2.4 609 chrX 18194043 intron Frq2 + chrX 18194348 intron Frq2 + chrX 18194652 intron Frq2 + chrX_13_18190001 chrX_18190001 D9 2710 chrX 18218041 18218067 chrX 18218183 18218207 4 141 2.0 3.0 2.5 1.1 166 chrX 18218041 intron CG33639 - chrX 18218124 intron CG33639 - chrX 18218207 intron CG33639 - chrX_4_18215001 chrX_18215001 D9 2711 chrX 18320463 18320499 chrX 18320620 18320656 7 157 2.0 3.0 2.5 2.0 193 chrX 18320463 intron CG6023 - chrX 18320560 intron CG6023 - chrX 18320656 intron CG6023 - chrX_7_18320001 chrX_18320001 D9 2712 chrX 18337396 18337439 chrX 18337521 18337562 5 125 3.5 2.5 3.0 1.2 166 chrX 18337396 intron CG6123 - chrX 18337479 intron CG6123 - chrX 18337562 intron CG6123 - chrX_5_18335001 chrX_18335001 D9 2713 chrX 18407384 18407419 chrX 18407493 18407528 11 108 6.0 3.0 4.5 2.0 144 chrX 18407384 intron CG32549 - chrX 18407456 intron CG32549 - chrX 18407528 intron CG32549 - chrX_11_18405001 chrX_18405001 D9 2714 chrX 18429470 18429516 chrX 18434806 18434852 Transpac 11 5335 5.5 4.5 5.0 1.8 5382 chrX 18429470 intergenic not near genes chrX 18432161 intergenic not near genes chrX 18434852 intergenic not near genes chrX_11_18430001 chrX_18430001 D9 2715 chrX 18467201 18467257 chrX 18467388 18467446 13 189 2.5 3.5 3.0 3.2 245 chrX 18467201 intron CG32547 - chrX 18467324 intron CG32547 - chrX 18467446 intron CG32547 - chrX_13_18465001 chrX_18465001 D9 2716 chrX 18486083 18486138 chrX 18486197 18486252 25 114 6.0 4.5 5.2 4.0 169 chrX 18486083 exon psh - chrX 18486168 intron psh - chrX 18486252 intron psh - chrX_25_18485001 chrX_18485001 D9 2717 chrX 18490046 18490102 chrX 18490193 18490249 23 147 9.5 6.0 7.8 2.6 203 chrX 18490046 intergenic CG15046 - chrX 18490148 intergenic not near genes chrX 18490249 intergenic not near genes chrX_23_18490001 chrX_18490001 D9 2718 chrX 18574782 18574817 chrX 18574887 18574922 6 105 1.0 5.5 3.2 1.4 140 chrX 18574782 intergenic not near genes chrX 18574852 intergenic not near genes chrX 18574922 intergenic not near genes chrX_6_18570001 chrX_18570001 D9 2719 chrX 18595466 18595519 chrX 18595573 18595627 17 108 4.0 4.5 4.2 3.3 161 chrX 18595466 intergenic not near genes chrX 18595546 intergenic not near genes chrX 18595627 intergenic not near genes chrX_17_18595001 chrX_18595001 D9 2720 chrX 18644995 18645045 chrX 18645118 18645168 18 123 5.0 2.5 3.8 3.8 173 chrX 18644995 intron Rip11 - chrX 18645082 intron Rip11 - chrX 18645168 intron Rip11 - chrX_18_18645001 chrX_18645001 D9 2721 chrX 18662414 18662458 chrX 18662534 18662578 19 120 9.0 8.5 8.8 1.9 164 chrX 18662414 intergenic CG6696 - chrX 18662496 intergenic CG6696 - chrX 18662578 intergenic CG6696 - chrX_19_18660001 chrX_18660001 D9 2722 chrX 18671218 18671248 chrX 18671325 18671353 6 107 1.0 5.0 3.0 1.5 135 chrX 18671218 intergenic not near genes chrX 18671286 intergenic not near genes chrX 18671353 intergenic not near genes chrX_6_18670001 chrX_18670001 D9 2723 chrX 18698838 18698878 chrX 18698978 18699020 10 142 1.0 5.5 3.2 2.4 182 chrX 18698838 intergenic not near genes chrX 18698929 intergenic not near genes chrX 18699020 intergenic not near genes chrX_10_18695001 chrX_18695001 D9 2724 chrX 18749844 18749888 chrX 18749953 18749997 7 109 1.0 0.5 0.8 3.9 153 chrX 18749844 intergenic not near genes chrX 18749920 intergenic not near genes chrX 18749997 intergenic not near genes chrX_7_18745001 chrX_18745001 D9 2725 chrX 18754311 18754342 chrX 18758003 18758034 297 11 3693 3.0 5.0 4.0 2.2 3723 chrX 18754311 intergenic not near genes chrX 18756172 intergenic not near genes chrX 18758034 intergenic not near genes chrX_11_18755001 chrX_18755001 D9 2726 chrX 18896497 18896545 chrX 18896632 18896681 9 135 3.5 3.0 3.2 2.1 184 chrX 18896497 3` UTR CG7349 + chrX 18896589 intergenic CG7349 + chrX 18896681 intergenic CG7349 + chrX_9_18895001 chrX_18895001 D9 2727 chrX 19073658 19073698 chrX 19073770 19073810 6 111 1.5 0.5 1.0 3.0 152 chrX 19073658 intergenic not near genes chrX 19073734 intergenic not near genes chrX 19073810 intergenic not near genes chrX_6_19070001 chrX_19070001 D9 2728 chrX 19080308 19080354 chrX 19080439 19080485 8 131 1.0 3.0 2.0 2.7 177 chrX 19080308 intergenic not near genes chrX 19080396 intergenic not near genes chrX 19080485 intergenic not near genes chrX_8_19080001 chrX_19080001 D9 2729 chrX 19098740 19098778 chrX 19098842 19098856 5 97 1.0 1.5 1.2 2.3 116 chrX 19098740 intergenic not near genes chrX 19098798 intergenic not near genes chrX 19098856 intergenic not near genes chrX_5_19095001 chrX_19095001 D9 2730 chrX 19099631 19099656 chrX 19099739 19099764 4 108 1.0 1.0 1.0 2.0 133 chrX 19099631 intergenic not near genes chrX 19099698 intergenic not near genes chrX 19099764 intergenic not near genes chrX_4_19095001 chrX_19095001 D9 2731 chrX 19125667 19125717 chrX 19125820 19125871 7 153 2.0 3.0 2.5 2.0 204 chrX 19125667 intron tgy - chrX 19125769 intron tgy - chrX 19125871 intron tgy - chrX_7_19125001 chrX_19125001 D9 2732 chrX 19136531 19136564 chrX 19143475 19143509 412 6 6944 3.5 2.0 2.8 1.6 6978 chrX 19136531 intergenic not near genes chrX 19140020 intergenic not near genes chrX 19143509 3` UTR RhoGAP18B - chrX_6_19140001 chrX_19140001 D9 2733 chrX 19182012 19182038 chrX 19182147 19182175 4 136 0.0 2.5 1.2 1.8 163 chrX 19182012 3` UTR CG7453 + chrX 19182094 intergenic CG7453 + chrX 19182175 intergenic CG7453 + chrX_4_19180001 chrX_19180001 D9 2734 chrX 19380136 19380185 chrX 19380402 19380451 pogo 7 266 1.0 1.5 1.2 3.2 315 chrX 19380136 intron kek5 + chrX 19380294 intron kek5 + chrX 19380451 intron kek5 + chrX_7_19380001 chrX_19380001 D9 2735 chrX 19461127 19461159 chrX 19461248 19461280 4 121 1.0 1.5 1.2 1.8 153 chrX 19461127 intron kek5 + chrX 19461204 intron kek5 + chrX 19461280 intron kek5 + chrX_4_19460001 chrX_19460001 D9 2736 chrX 19472098 19472153 chrX 19472692 19472748 jockey 6 593 1.0 4.0 2.5 1.7 650 chrX 19472098 intergenic kek5 + chrX 19472423 intergenic not near genes chrX 19472748 intergenic not near genes chrX_6_19470001 chrX_19470001 D9 2737 chrX 19662005 19662051 chrX 19662253 19662299 7 248 3.5 1.0 2.2 2.2 294 chrX 19662005 intron CG14223 - chrX 19662152 intron CG14223 - chrX 19662299 intron CG14223 - chrX_7_19660001 chrX_19660001 D9 2738 chrX 19710063 19710098 chrX 19711863 19711909 S-element 24 1810 8.5 15.5 12.0 1.8 1846 chrX 19710063 intron meso18E - chrX 19710986 intron meso18E - chrX 19711909 intron meso18E - chrX_24_19710001 chrX_19710001 D9 2739 chrX 19744610 19744625 chrX 19744761 19744776 4 150 52.0 43.0 47.5 0.1 166 chrX 19744610 5` UTR,exon CG33932 +,Rpp20 + chrX 19744693 intron,intron CG33932 +,Rpp20 + chrX 19744776 5` UTR,exon CG33932 +,Rpp20 + chrX_4_19740001 chrX_19740001 D9 2740 chrX 19744628 19744661 chrX 19744754 19744808 23 144 41.5 41.0 41.2 0.5 180 chrX 19744628 5` UTR,exon CG33932 +,Rpp20 + chrX 19744718 intron,intron CG33932 +,Rpp20 + chrX 19744808 5` UTR,exon CG33932 +,Rpp20 + chrX_23_19740001 chrX_19740001 D9 2741 chrX 19838480 19838527 chrX 19838583 19838630 9 103 5.5 6.5 6.0 1.3 150 chrX 19838480 intron pico - chrX 19838555 intron pico - chrX 19838630 intron pico - chrX_9_19835001 chrX_19835001 D9 2742 chrX 19881437 19881481 chrX 19881543 19881587 5 106 1.0 1.0 1.0 2.5 150 chrX 19881437 intron Hers + chrX 19881512 intron Hers + chrX 19881587 intron Hers + chrX_5_19880001 chrX_19880001 D9 2743 chrX 19884077 19884113 chrX 19884172 19884213 11 100 6.0 3.0 4.5 2.0 136 chrX 19884077 intron Hers + chrX 19884145 intron Hers + chrX 19884213 intron Hers + chrX_11_19880001 chrX_19880001 D9 2744 chrX 19897362 19897411 chrX 19897464 19897513 13 101 3.0 4.5 3.8 2.7 151 chrX 19897362 intron Hers + chrX 19897438 intron Hers + chrX 19897513 intron Hers + chrX_13_19895001 chrX_19895001 D9 2745 chrX 19971798 19971826 chrX 19971899 19971927 5 102 5.5 6.0 5.8 0.7 129 chrX 19971798 intergenic not near genes chrX 19971862 intergenic not near genes chrX 19971927 intergenic not near genes chrX_5_19970001 chrX_19970001 D9 2746 chrX 19983856 19983898 chrX 19983961 19984003 12 105 0.5 3.0 1.8 4.3 147 chrX 19983856 intergenic not near genes chrX 19983930 intergenic not near genes chrX 19984003 intergenic not near genes chrX_12_19980001 chrX_19980001 D9 2747 chrX 19992390 19992434 chrX 19992491 19992535 10 100 8.5 7.0 7.8 1.1 145 chrX 19992390 intergenic not near genes chrX 19992462 intergenic not near genes chrX 19992535 intergenic not near genes chrX_10_19990001 chrX_19990001 D9 2748 chrX 20041509 20041560 chrX 20041614 20041664 13 105 4.0 3.5 3.8 2.7 155 chrX 20041509 intron Dop2R - chrX 20041586 intron Dop2R - chrX 20041664 intron Dop2R - chrX_13_20040001 chrX_20040001 D9 2749 chrX 20052760 20052814 chrX 20052869 20052922 26 108 4.5 2.0 3.2 6.2 162 chrX 20052760 intron Dop2R - chrX 20052841 intron Dop2R - chrX 20052922 intron Dop2R - chrX_26_20050001 chrX_20050001 D9 2750 chrX 20125742 20125756 chrX 20125837 20125858 4 100 5.5 11.0 8.2 0.4 116 chrX 20125742 intergenic CG34331 + chrX 20125800 intergenic not near genes chrX 20125858 intergenic not near genes chrX_4_20125001 chrX_20125001 D9 2751 chrX 20132279 20132307 chrX 20132387 20132415 5 108 8.0 10.0 9.0 0.5 136 chrX 20132279 intergenic not near genes chrX 20132347 intergenic not near genes chrX 20132415 intergenic not near genes chrX_5_20130001 chrX_20130001 D9 2752 chrX 20279727 20279778 chrX 20279833 20279884 5 106 2.0 0.0 1.0 2.5 157 chrX 20279727 intergenic not near genes chrX 20279806 intergenic not near genes chrX 20279884 intergenic not near genes chrX_5_20275001 chrX_20275001 D9 2753 chrX 20312860 20312909 chrX 20312961 20313012 8 102 1.5 3.0 2.2 2.5 152 chrX 20312860 intron CG1504 - chrX 20312936 intron CG1504 - chrX 20313012 intron CG1504 - chrX_8_20310001 chrX_20310001 D9 2754 chrX 20314249 20314259 chrX 20314355 20314357 7 104 9.5 10.0 9.8 0.6 108 chrX 20314249 intron CG1504 - chrX 20314303 intron CG1504 - chrX 20314357 intron CG1504 - chrX_7_20310001 chrX_20310001 D9 2755 chrX 20317753 20317804 chrX 20317861 20317912 19 106 7.0 5.5 6.2 2.6 159 chrX 20317753 intron CG1504 - chrX 20317832 intron CG1504 - chrX 20317912 intron CG1504 - chrX_19_20315001 chrX_20315001 D9 2756 chrX 20369294 20369339 chrX 20369403 20369448 20 109 5.0 4.0 4.5 3.6 154 chrX 20369294 intergenic not near genes chrX 20369371 intergenic not near genes chrX 20369448 intergenic not near genes chrX_20_20365001 chrX_20365001 D9 2757 chrX 20377327 20377340 chrX 20378819 20378832 hobo 4 1492 7.0 21.5 14.2 0.3 1505 chrX 20377327 intergenic not near genes chrX 20378080 intergenic not near genes chrX 20378832 intergenic not near genes chrX_4_20375001 chrX_20375001 D9 2758 chrX 20432153 20432206 chrX 20432253 20432307 31 100 6.0 6.5 6.2 4.3 154 chrX 20432153 exon mal + chrX 20432230 exon mal + chrX 20432307 exon mal + chrX_31_20430001 chrX_20430001 D9 2759 chrX 20443162 20443202 chrX 20443263 20443303 8 101 5.5 6.0 5.8 1.2 141 chrX 20443162 exon CG1695 + chrX 20443232 intron CG1695 + chrX 20443303 intron CG1695 + chrX_8_20440001 chrX_20440001 D9 2760 chrX 20493886 20493926 chrX 20494070 20494112 4 185 0.0 1.0 0.5 2.7 226 chrX 20493886 intron RhoGAP19D - chrX 20493999 intron RhoGAP19D - chrX 20494112 intron RhoGAP19D - chrX_4_20490001 chrX_20490001 D9 2761 chrX 20504105 20504143 chrX 20505648 20505689 transib2 7 1545 6.0 4.5 5.2 1.1 1584 chrX 20504105 intron RhoGAP19D - chrX 20504897 intron RhoGAP19D - chrX 20505689 intron RhoGAP19D - chrX_7_20500001 chrX_20500001 D9 2762 chrX 20528582 20528627 chrX 20528954 20529000 10 373 5.0 3.0 4.0 2.0 418 chrX 20528582 intergenic not near genes chrX 20528791 intergenic not near genes chrX 20529000 intergenic not near genes chrX_10_20525001 chrX_20525001 D9 2763 chrX 20531736 20531783 chrX 20531860 20531907 9 124 2.5 2.0 2.2 2.8 171 chrX 20531736 intergenic not near genes chrX 20531822 intergenic not near genes chrX 20531907 intergenic not near genes chrX_9_20530001 chrX_20530001 D9 2764 chrX 20541304 20541338 chrX 20541455 20541486 5 149 0.5 0.0 0.2 4.2 182 chrX 20541304 intron RunxB + chrX 20541395 intron RunxB + chrX 20541486 intron RunxB + chrX_5_20540001 chrX_20540001 D9 2765 chrX 20546527 20546555 chrX 20546718 20546746 6 191 2.5 1.5 2.0 2.0 219 chrX 20546527 intron RunxB + chrX 20546636 intron RunxB + chrX 20546746 intron RunxB + chrX_6_20545001 chrX_20545001 D9 2766 chrX 20572764 20572797 chrX 20573085 20573122 11 325 5.0 5.0 5.0 1.8 358 chrX 20572764 intergenic not near genes chrX 20572943 intergenic not near genes chrX 20573122 intergenic not near genes chrX_11_20570001 chrX_20570001 D9 2767 chrX 20593654 20593706 chrX 20593985 20594036 7 329 3.5 3.5 3.5 1.6 382 chrX 20593654 intron RunxA - chrX 20593845 intron RunxA - chrX 20594036 intron RunxA - chrX_7_20590001 chrX_20590001 D9 2768 chrX 20634405 20634454 chrX 20634515 20634562 5 109 3.5 1.0 2.2 1.6 157 chrX 20634405 intergenic not near genes chrX 20634484 intergenic not near genes chrX 20634562 intergenic not near genes chrX_5_20630001 chrX_20630001 D9 2769 chrX 20635419 20635447 chrX 20635609 20635636 10 190 3.0 6.0 4.5 1.8 217 chrX 20635419 intergenic not near genes chrX 20635528 intergenic not near genes chrX 20635636 intergenic not near genes chrX_10_20635001 chrX_20635001 D9 2770 chrX 20710418 20710436 chrX 20710520 20710538 6 102 0.0 0.5 0.2 5.0 120 chrX 20710418 intergenic not near genes chrX 20710478 intergenic not near genes chrX 20710538 intergenic not near genes chrX_6_20710001 chrX_20710001 D9 2771 chrX 20780204 20780238 chrX 20780454 20780488 7 250 1.0 4.5 2.8 1.8 284 chrX 20780204 intron,3` UTR shakB -,CG32507 - chrX 20780346 intron,3` UTR shakB -,CG32507 - chrX 20780488 intron,3` UTR shakB -,CG32507 - chrX_7_20780001 chrX_20780001 D9 2772 chrX 20791535 20791579 chrX 20791660 20791704 7 125 2.0 3.0 2.5 2.0 169 chrX 20791535 intron shakB - chrX 20791620 intron shakB - chrX 20791704 intron shakB - chrX_7_20790001 chrX_20790001 D9 2773 chrX 20836712 20836751 chrX 20844339 20844378 roo 4 7627 1.0 5.5 3.2 1.0 7666 chrX 20836712 intron shakB - chrX 20840545 intron shakB - chrX 20844378 intron shakB - chrX_4_20840001 chrX_20840001 D9 2774 chrX 20911892 20911921 chrX 20911994 20912023 10 102 6.0 13.0 9.5 1.0 131 chrX 20911892 intron shakB - chrX 20911958 intron shakB - chrX 20912023 intron shakB - chrX_10_20910001 chrX_20910001 D9 2775 chrX 20940699 20940740 chrX 20942193 20942234 hobo 15 1494 6.0 7.5 6.8 1.9 1535 chrX 20940699 intergenic not near genes chrX 20941466 intergenic not near genes chrX 20942234 intergenic not near genes chrX_15_20940001 chrX_20940001 D9 2776 chrX 20981003 20981035 chrX 20981131 20981163 14 128 6.0 3.0 4.5 2.5 160 chrX 20981003 intergenic not near genes chrX 20981083 intergenic not near genes chrX 20981163 intergenic not near genes chrX_14_20980001 chrX_20980001 D9 2777 chrX 21022245 21022273 chrX 21022439 21022467 8 193 6.5 2.5 4.5 1.5 222 chrX 21022245 intergenic not near genes chrX 21022356 intergenic not near genes chrX 21022467 intergenic not near genes chrX_8_21020001 chrX_21020001 D9 2778 chrX 21029789 21029803 chrX 21029955 21029969 4 166 1.0 0.0 0.5 2.7 180 chrX 21029789 3` UTR CG1529 - chrX 21029879 3` UTR CG1529 - chrX 21029969 3` UTR CG1529 - chrX_4_21025001 chrX_21025001 D9 2779 chrX 21040456 21040511 chrX 21045349 21045404 20 4894 44.0 42.0 43.0 0.5 4948 chrX 21040456 3` UTR,5` UTR Ntf-2 +,CG15449 - chrX 21042930 intron Mgstl + chrX 21045404 intron Cbs + chrX_20_21040001 chrX_21040001 D9 2780 chrX 21076301 21076340 chrX 21076405 21076437 12 103 6.0 0.0 3.0 3.0 136 chrX 21076301 intron bves + chrX 21076369 intron bves + chrX 21076437 intron bves + chrX_12_21075001 chrX_21075001 D9 2781 chrX 21086111 21086155 chrX 21087165 21087209 jockey 7 1054 2.5 3.0 2.8 1.8 1098 chrX 21086111 intergenic not near genes chrX 21086660 intergenic not near genes chrX 21087209 intergenic not near genes chrX_7_21085001 chrX_21085001 D9 2782 chrX 21088019 21088071 chrX 21088174 21088228 6 157 1.5 0.5 1.0 3.0 209 chrX 21088019 intergenic not near genes chrX 21088124 intergenic not near genes chrX 21088228 intergenic not near genes chrX_6_21085001 chrX_21085001 D9 2783 chrX 21190790 21190825 chrX 21190896 21190931 12 106 0.0 4.5 2.2 3.8 141 chrX 21190790 intergenic not near genes chrX 21190860 intergenic not near genes chrX 21190931 intergenic not near genes chrX_12_21190001 chrX_21190001 D9 2784 chrX 21197036 21197086 chrX 21197139 21197188 16 103 5.5 3.5 4.5 2.9 152 chrX 21197036 intergenic not near genes chrX 21197112 intergenic not near genes chrX 21197188 intergenic not near genes chrX_16_21195001 chrX_21195001 D9 2785 chrX 21228994 21229048 chrX 21229095 21229147 8 101 0.0 2.5 1.2 3.6 153 chrX 21228994 intron CG32521 - chrX 21229070 intron CG32521 - chrX 21229147 intron CG32521 - chrX_8_21225001 chrX_21225001 D9 2786 chrX 21233374 21233379 chrX 21233477 21233482 5 103 11.5 4.5 8.0 0.6 108 chrX 21233374 intron CG32521 - chrX 21233428 intron CG32521 - chrX 21233482 intron CG32521 - chrX_5_21230001 chrX_21230001 D9 2787 chrX 21233381 21233405 chrX 21233474 21233508 10 102 4.5 4.0 4.2 1.9 127 chrX 21233381 intron CG32521 - chrX 21233444 intron CG32521 - chrX 21233508 intron CG32521 - chrX_10_21230001 chrX_21230001 D9 2788 chrX 21253267 21253294 chrX 21253369 21253394 7 102 3.5 6.5 5.0 1.2 127 chrX 21253267 intron CG32521 - chrX 21253330 intron CG32521 - chrX 21253394 intron CG32521 - chrX_7_21250001 chrX_21250001 D9 2789 chrX 21255471 21255512 chrX 21255622 21255661 16 151 2.0 0.0 1.0 8.0 190 chrX 21255471 intron CG32521 - chrX 21255566 intron CG32521 - chrX 21255661 intron CG32521 - chrX_16_21255001 chrX_21255001 D9 2790 chrX 21268048 21268082 chrX 21268154 21268188 8 106 3.5 3.5 3.5 1.8 140 chrX 21268048 intron CG32521 - chrX 21268118 intron CG32521 - chrX 21268188 intron CG32521 - chrX_8_21265001 chrX_21265001 D9 2791 chrX 21270327 21270366 chrX 21270441 21270481 10 115 4.5 5.0 4.8 1.7 154 chrX 21270327 intron CG32521 - chrX 21270404 intron CG32521 - chrX 21270481 intron CG32521 - chrX_10_21270001 chrX_21270001 D9 2792 chrX 21275139 21275175 chrX 21275242 21275278 9 103 4.0 1.5 2.8 2.4 139 chrX 21275139 intron CG32521 - chrX 21275208 intron CG32521 - chrX 21275278 intron CG32521 - chrX_9_21275001 chrX_21275001 D9 2793 chrX 21358055 21358096 chrX 21358160 21358201 12 105 5.0 3.0 4.0 2.4 146 chrX 21358055 intergenic sol +,Sep1 + chrX 21358128 intergenic Sep1 +,sol + chrX 21358201 intergenic Sep1 +,sol + chrX_12_21355001 chrX_21355001 D9 2794 chrX 21398879 21398906 chrX 21398958 21399004 5 97 3.0 2.0 2.5 1.4 125 chrX 21398879 intergenic not near genes chrX 21398942 intergenic not near genes chrX 21399004 intergenic not near genes chrX_5_21395001 chrX_21395001 D9 2795 chrX 21419198 21419244 chrX 21419308 21419354 6 110 1.5 3.0 2.2 1.9 156 chrX 21419198 intergenic not near genes chrX 21419276 intergenic not near genes chrX 21419354 intergenic not near genes chrX_6_21415001 chrX_21415001 D9 2796 chrX 21455200 21455244 chrX 21455404 21455455 4 210 0.5 0.0 0.2 3.3 255 chrX 21455200 intron CG42343 - chrX 21455328 intron CG42343 - chrX 21455455 intron CG42343 - chrX_4_21455001 chrX_21455001 D9 2797 chrX 21458692 21458724 chrX 21464153 21464183 Ivk 5 5460 0.5 5.0 2.8 1.3 5491 chrX 21458692 intergenic not near genes chrX 21461438 intergenic not near genes chrX 21464183 intergenic not near genes chrX_5_21460001 chrX_21460001 D9 2798 chrX 21474383 21474435 chrX 21474774 21474826 1731 21 391 5.5 6.0 5.8 3.1 443 chrX 21474383 intergenic not near genes chrX 21474604 intergenic not near genes chrX 21474826 intergenic not near genes chrX_21_21470001 chrX_21470001 D9 2799 chrX 21507297 21507355 chrX 21507412 21507467 27 115 9.0 8.0 8.5 2.8 170 chrX 21507297 intron CR45082 - chrX 21507382 intron CR45082 - chrX 21507467 intron CR45082 - chrX_27_21505001 chrX_21505001 D9 2800 chrX 21567939 21568054 chrX 21568044 21568155 8 103 0.0 0.0 0.0 8.0 216 chrX 21567939 intergenic not near genes chrX 21568047 intergenic not near genes chrX 21568155 intergenic not near genes chrX_8_21565001 chrX_21565001 D9 2801 chrX 21668245 21668281 chrX 21668355 21668391 7 110 38.5 35.5 37.0 0.2 146 chrX 21668245 intergenic not near genes chrX 21668318 intergenic not near genes chrX 21668391 intergenic not near genes chrX_7_21665001 chrX_21665001 D9 2802 chrX 22522612 22522644 chrX 22525457 22525489 NOF 6 2845 2.0 2.5 2.2 1.9 2877 chrX 22522612 intron CG17600 + chrX 22524050 intron CG17600 + chrX 22525489 intron CG17600 + chrX_6_22520001 chrX_22520001 D9 2803 chrX 22596922 22596968 chrX 22597324 22597373 15 405 1.5 2.0 1.8 5.4 451 chrX 22596922 intron Cda4 - chrX 22597148 intron Cda4 - chrX 22597373 intron Cda4 - chrX_15_22595001 chrX_22595001 D9 2804 chrX 22660551 22660603 chrX 22660660 22660709 8 109 4.5 3.0 3.8 1.7 158 chrX 22660551 intron CR44997 + chrX 22660630 intron CR44997 + chrX 22660709 intron CR44997 + chrX_8_22660001 chrX_22660001 D9 2805 chrX 22697002 22697055 chrX 22697143 22697195 19 141 3.5 6.5 5.0 3.2 193 chrX 22697002 intron CR44997 + chrX 22697098 intron CR44997 + chrX 22697195 intron CR44997 + chrX_19_22695001 chrX_22695001 D9 2806 chrX 22697472 22697502 chrX 22701792 22701824 Juan 8 4321 8.5 2.5 5.5 1.2 4352 chrX 22697472 intron CR44997 + chrX 22699648 intron CR44997 + chrX 22701824 intron CR44997 + chrX_8_22695001 chrX_22695001 D9 2807 chrX 22771480 22771529 chrX 22774796 22774845 297 11 3316 5.0 2.0 3.5 2.4 3365 chrX 22771480 intron CR44997 + chrX 22773162 intron CR44997 + chrX 22774845 intron CR44997 + chrX_11_22770001 chrX_22770001 D9 2808 chrX 22796972 22797015 chrX 22797082 22797125 4 110 1.5 1.5 1.5 1.6 153 chrX 22796972 intron CR44997 + chrX 22797048 intron CR44997 + chrX 22797125 intron CR44997 + chrX_4_22795001 chrX_22795001 D9 2809 chrX 22811974 22812004 chrX 22816771 22816801 F-element 11 4797 7.0 5.0 6.0 1.6 4827 chrX 22811974 intergenic CG12446 - chrX 22814388 intergenic not near genes chrX 22816801 intergenic not near genes chrX_11_22810001 chrX_22810001 D9 2810 chrX 22824218 22824441 chrX 22824369 22824599 11 154 0.5 0.5 0.5 7.3 381 chrX 22824218 intergenic fog - chrX 22824408 3` UTR fog - chrX 22824599 3` UTR fog - chrX_11_22820001 chrX_22820001 D9 2811 chrX 22869154 22869163 chrX 22869255 22869264 5 102 5.5 7.5 6.5 0.7 110 chrX 22869154 intron CG42346 + chrX 22869209 intron CG42346 + chrX 22869264 intron CG42346 + chrX_5_22865001 chrX_22865001 D9 2812 chrX 22870842 22870898 chrX 22870958 22871014 18 116 6.0 3.5 4.8 3.1 172 chrX 22870842 intron,3` UTR CG42346 +,CR43656 - chrX 22870928 intron,3` UTR CG42346 +,CR43656 - chrX 22871014 intron,3` UTR CG42346 +,CR43656 - chrX_18_22870001 chrX_22870001 D9 2813 chrX 22895702 22895759 chrX 22895845 22895902 27 142 3.0 6.0 4.5 4.9 200 chrX 22895702 intergenic not near genes chrX 22895802 intergenic not near genes chrX 22895902 intergenic not near genes chrX_27_22895001 chrX_22895001 D9 2814 chrX 22987080 22987132 chrX 22989764 22989816 Burdock 8 2683 1.5 1.0 1.2 3.6 2736 chrX 22987080 intron,intron stnA -,stnB - chrX 22988448 intron,intron stnA -,stnB - chrX 22989816 intron,intron stnA -,stnB - chrX_8_22985001 chrX_22985001 D9 2815 chrX 22996289 22996336 chrX 23003546 23003593 roo 7 7257 1.0 2.5 1.8 2.5 7304 chrX 22996289 intron,intron stnA -,stnB - chrX 22999941 intron,intron stnA -,stnB - chrX 23003593 intron,intron stnA -,stnB - chrX_7_22995001 chrX_22995001 D9 2816 chrY 1419879 1419909 chrY 1420157 1420188 8 279 5.5 6.0 5.8 1.2 309 chrY 1419879 intergenic not near genes chrY 1420034 intergenic not near genes chrY 1420188 intergenic not near genes chrY_8_1420001 chrY_1420001 D9