SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 47460 47489 chr2L 52566 52595 jockey 11 5106 5.5 3.5 4.5 2.0 5135 chr2L 47460 intron Cda5 - chr2L 50028 intron Cda5 - chr2L 52595 intron Cda5 - chr2L_11_50001 chr2L_50001 D8 9 chr2L 347889 347919 chr2L 355390 355420 blood 6 7497 1.5 2.0 1.8 2.1 7531 chr2L 347889 3` UTR Plc21C + chr2L 351654 intron Plc21C + chr2L 355420 3` UTR Plc21C + chr2L_6_350001 chr2L_350001 D8 17 chr2L 686917 686942 chr2L 695958 695983 roo 9 9039 2.0 3.5 2.8 2.4 9066 chr2L 686917 intron ds - chr2L 691450 intron ds - chr2L 695983 intron ds - chr2L_9_690001 chr2L_690001 D8 19 chr2L 770464 770494 chr2L 772246 772276 Bari1 12 1781 2.5 5.0 3.8 2.5 1812 chr2L 770464 intergenic not near genes chr2L 771370 intergenic not near genes chr2L 772276 intergenic CR44614 + chr2L_12_770001 chr2L_770001 D8 23 chr2L 976880 976908 chr2L 984514 984545 roo 18 7636 2.5 1.5 2.0 6.0 7665 chr2L 976880 intergenic not near genes chr2L 980712 intergenic not near genes chr2L 984545 intergenic not near genes chr2L_18_980001 chr2L_980001 D8 27 chr2L 1220126 1220155 chr2L 1227593 1227622 blood 16 7467 5.0 1.0 3.0 4.0 7496 chr2L 1220126 intron CG42329 + chr2L 1223874 intron CG42329 + chr2L 1227622 intron CG42329 + chr2L_16_1220001 chr2L_1220001 D8 29 chr2L 1301749 1301777 chr2L 1302289 1302317 gypsy 10 540 2.5 2.5 2.5 2.9 568 chr2L 1301749 intergenic not near genes chr2L 1302033 intergenic not near genes chr2L 1302317 intergenic not near genes chr2L_10_1300001 chr2L_1300001 D8 38 chr2L 1570683 1570718 chr2L 1573556 1573591 F-element 16 2872 3.0 2.5 2.8 4.2 2908 chr2L 1570683 intron haf + chr2L 1572137 intron haf + chr2L 1573591 intron haf + chr2L_16_1570001 chr2L_1570001 D8 41 chr2L 1678957 1679009 chr2L 1686441 1686475 blood 6 7469 0.0 2.5 1.2 2.7 7518 chr2L 1678957 intron chinmo + chr2L 1682716 intron chinmo + chr2L 1686475 intron chinmo + chr2L_6_1680001 chr2L_1680001 D8 42 chr2L 1711356 1711388 chr2L 1711681 1711713 mdg3 22 324 5.5 7.0 6.2 3.1 357 chr2L 1711356 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711534 3` UTR frtz - chr2L 1711713 3` UTR frtz - chr2L_22_1710001 chr2L_1710001 D8 48 chr2L 2100379 2100408 chr2L 2109531 2109551 roo 9 9151 4.5 5.5 5.0 1.5 9172 chr2L 2100379 intron dpr3 - chr2L 2104965 intron dpr3 - chr2L 2109551 intron dpr3 - chr2L_9_2100001 chr2L_2100001 D8 49 chr2L 2112112 2112146 chr2L 2119775 2119808 opus 16 7658 4.5 5.0 4.8 2.8 7696 chr2L 2112112 intergenic not near genes chr2L 2115960 intergenic not near genes chr2L 2119808 intergenic not near genes chr2L_16_2115001 chr2L_2115001 D8 52 chr2L 2294048 2294072 chr2L 2299245 2299278 copia 13 5204 4.5 6.5 5.5 2.0 5230 chr2L 2294048 intergenic not near genes chr2L 2296663 intergenic not near genes chr2L 2299278 intergenic not near genes chr2L_13_2295001 chr2L_2295001 D8 57 chr2L 2565553 2565559 chr2L 2571627 2571633 297 5 6074 1.5 2.0 1.8 1.8 6080 chr2L 2565553 exon Cyp309a2 - chr2L 2568593 intron Cyp309a2 - chr2L 2571633 intron Cyp309a2 - chr2L_5_2565001 chr2L_2565001 D8 63 chr2L 2661220 2661235 chr2L 2663036 2663074 I-element 5 1831 2.0 1.5 1.8 1.8 1854 chr2L 2661220 intergenic not near genes chr2L 2662147 intergenic not near genes chr2L 2663074 intergenic not near genes chr2L_5_2660001 chr2L_2660001 D8 65 chr2L 2772616 2772628 chr2L 2779199 2779211 297 8 6583 4.0 5.0 4.5 1.5 6595 chr2L 2772616 3` UTR Syt1 - chr2L 2775914 intron Syt1 - chr2L 2779211 3` UTR Syt1 - chr2L_8_2775001 chr2L_2775001 D8 70 chr2L 3073031 3073063 chr2L 3078235 3078267 copia 11 5203 2.0 3.5 2.8 2.9 5236 chr2L 3073031 intron toc - chr2L 3075649 intron toc - chr2L 3078267 intron toc - chr2L_11_3075001 chr2L_3075001 D8 76 chr2L 3202736 3202770 chr2L 3210166 3210200 mdg1 10 7430 0.0 3.5 1.8 3.6 7464 chr2L 3202736 intergenic not near genes chr2L 3206468 intergenic not near genes chr2L 3210200 intergenic CR45336 + chr2L_10_3205001 chr2L_3205001 D8 77 chr2L 3251498 3251523 chr2L 3259064 3259089 springer 9 7566 1.5 3.5 2.5 2.6 7591 chr2L 3251498 intergenic not near genes chr2L 3255294 intergenic not near genes chr2L 3259089 intergenic not near genes chr2L_9_3255001 chr2L_3255001 D8 83 chr2L 3649793 3649806 chr2L 3654996 3655009 copia 4 5203 1.0 1.0 1.0 2.0 5216 chr2L 3649793 intron for - chr2L 3652401 intron for - chr2L 3655009 intron for - chr2L_4_3650001 chr2L_3650001 D8 99 chr2L 4918165 4918179 chr2L 4923239 4923253 jockey 6 5074 3.0 0.0 1.5 2.4 5088 chr2L 4918165 intron hoe1 - chr2L 4920709 intron hoe1 - chr2L 4923253 intron hoe1 - chr2L_6_4920001 chr2L_4920001 D8 107 chr2L 5342774 5342791 chr2L 5345155 5345172 Doc 5 2381 4.5 3.0 3.8 1.0 2398 chr2L 5342774 intergenic not near genes chr2L 5343973 intergenic not near genes chr2L 5345172 intergenic not near genes chr2L_5_5340001 chr2L_5340001 D8 113 chr2L 5827715 5827741 chr2L 5836724 5836750 roo 5 9009 2.0 5.0 3.5 1.1 9035 chr2L 5827715 intron TrissinR + chr2L 5832232 intron TrissinR + chr2L 5836750 intron TrissinR + chr2L_5_5830001 chr2L_5830001 D8 134 chr2L 6363147 6363182 chr2L 6366070 6366105 Burdock 7 2923 2.5 2.5 2.5 2.0 2958 chr2L 6363147 intergenic not near genes chr2L 6364626 intergenic not near genes chr2L 6366105 intergenic not near genes chr2L_7_6360001 chr2L_6360001 D8 136 chr2L 6426854 6426889 chr2L 6445115 6445150 roo 15 18261 2.5 5.0 3.8 3.1 18296 chr2L 6426854 3` UTR CG9527 - chr2L 6436002 intron CG9527 - chr2L 6445150 exon CG9527 - chr2L_15_6435001 chr2L_6435001 D8 157 chr2L 7343324 7343358 chr2L 7350441 7350475 roo 9 7117 3.0 4.0 3.5 2.0 7151 chr2L 7343324 intron Wnt6 + chr2L 7346900 intron Wnt6 + chr2L 7350475 intron Wnt6 + chr2L_9_7345001 chr2L_7345001 D8 166 chr2L 7959039 7959060 chr2L 7960451 7960472 pogo 8 1412 7.5 0.0 3.8 1.7 1433 chr2L 7959039 intron Snoo - chr2L 7959756 intron Snoo - chr2L 7960472 intron Snoo - chr2L_8_7955001 chr2L_7955001 D8 167 chr2L 7977089 7977113 chr2L 7984064 7984089 297 4 6974 3.5 4.5 4.0 0.8 7000 chr2L 7977089 intron Snoo - chr2L 7980589 intron Snoo - chr2L 7984089 intron,5` UTR Snoo -,CG7231 + chr2L_4_7980001 chr2L_7980001 D8 168 chr2L 8013611 8013633 chr2L 8018816 8018838 copia 5 5205 2.0 0.0 1.0 2.5 5227 chr2L 8013611 intron Tg + chr2L 8016224 intron Tg + chr2L 8018838 intron Tg + chr2L_5_8015001 chr2L_8015001 D8 179 chr2L 8723113 8723145 chr2L 8731491 8731523 Tirant 10 8378 5.0 2.5 3.8 2.1 8410 chr2L 8723113 intron raw - chr2L 8727318 intron raw - chr2L 8731523 intron raw - chr2L_10_8725001 chr2L_8725001 D8 188 chr2L 9000278 9000312 chr2L 9007789 9007823 roo 17 7511 5.0 1.5 3.2 4.0 7545 chr2L 9000278 intergenic Try29F + chr2L 9004050 intergenic not near genes chr2L 9007823 intergenic not near genes chr2L_17_9000001 chr2L_9000001 D8 193 chr2L 9217970 9218002 chr2L 9222758 9222790 Doc 13 4788 2.0 5.5 3.8 2.7 4820 chr2L 9217970 intron tai + chr2L 9220380 intron tai + chr2L 9222790 intron tai + chr2L_13_9220001 chr2L_9220001 D8 209 chr2L 9973723 9973758 chr2L 9980843 9980878 HMS-Beagle 16 7120 5.0 4.0 4.5 2.9 7155 chr2L 9973723 intergenic not near genes chr2L 9977300 intergenic not near genes chr2L 9980878 intergenic not near genes chr2L_16_9975001 chr2L_9975001 D8 214 chr2L 10156322 10156350 chr2L 10163793 10163821 blood 13 7471 2.5 3.0 2.8 3.4 7499 chr2L 10156322 intron,3` UTR CG44153 -,CG4839 + chr2L 10160072 intron CG44153 - chr2L 10163821 intron CG44153 - chr2L_13_10160001 chr2L_10160001 D8 230 chr2L 10862839 10862867 chr2L 10864454 10864482 Rt1c 17 1614 2.0 5.5 3.8 3.5 1643 chr2L 10862839 3` UTR CR43807 - chr2L 10863660 intron CR43807 - chr2L 10864482 3` UTR CR43807 - chr2L_17_10860001 chr2L_10860001 D8 232 chr2L 10946948 10946977 chr2L 10956164 10956193 roo 14 9216 5.0 10.0 7.5 1.6 9245 chr2L 10946948 intron dpr2 - chr2L 10951570 intron dpr2 - chr2L 10956193 intron dpr2 - chr2L_14_10950001 chr2L_10950001 D8 241 chr2L 11540590 11540609 chr2L 11547993 11548012 Tabor 4 7403 3.0 4.0 3.5 0.9 7422 chr2L 11540590 intergenic not near genes chr2L 11544301 intergenic not near genes chr2L 11548012 intergenic not near genes chr2L_4_11540001 chr2L_11540001 D8 243 chr2L 11563635 11563658 chr2L 11568840 11568863 copia 13 5205 6.0 3.0 4.5 2.4 5228 chr2L 11563635 intergenic not near genes chr2L 11566249 intergenic not near genes chr2L 11568863 intergenic not near genes chr2L_13_11565001 chr2L_11565001 D8 244 chr2L 11614056 11614077 chr2L 11615552 11615557 hopper2 9 1493 3.0 4.0 3.5 2.0 1501 chr2L 11614056 intron kek2 + chr2L 11614806 intron kek2 + chr2L 11615557 intron kek2 + chr2L_9_11610001 chr2L_11610001 D8 246 chr2L 11713506 11713536 chr2L 11720975 11721005 blood 5 7464 1.5 1.0 1.2 2.3 7499 chr2L 11713506 intergenic not near genes chr2L 11717256 intergenic not near genes chr2L 11721005 intergenic CR44143 + chr2L_5_11715001 chr2L_11715001 D8 259 chr2L 12067330 12067360 chr2L 12074383 12074413 297 7 7053 1.5 0.5 1.0 3.5 7083 chr2L 12067330 intergenic not near genes chr2L 12070872 intergenic not near genes chr2L 12074413 intergenic not near genes chr2L_7_12070001 chr2L_12070001 D8 270 chr2L 12558319 12558337 chr2L 12565449 12565467 HMS-Beagle 4 7130 1.5 1.5 1.5 1.6 7148 chr2L 12558319 intergenic not near genes chr2L 12561893 intergenic not near genes chr2L 12565467 intergenic not near genes chr2L_4_12560001 chr2L_12560001 D8 272 chr2L 12728924 12728946 chr2L 12729164 12729186 pogo 10 239 5.0 2.5 3.8 2.1 262 chr2L 12728924 intron MRP + chr2L 12729055 intron MRP + chr2L 12729186 exon MRP + chr2L_10_12725001 chr2L_12725001 D8 273 chr2L 12731053 12731091 chr2L 12735821 12735859 F-element 13 4768 3.0 4.5 3.8 2.7 4806 chr2L 12731053 intron MRP + chr2L 12733456 intron MRP + chr2L 12735859 intron MRP + chr2L_13_12730001 chr2L_12730001 D8 274 chr2L 12739171 12739206 chr2L 12743953 12743978 Doc 18 4781 1.0 4.5 2.8 4.7 4807 chr2L 12739171 exon MRP + chr2L 12741574 intron MRP + chr2L 12743978 intron MRP + chr2L_18_12740001 chr2L_12740001 D8 277 chr2L 12791606 12791622 chr2L 12795282 12795298 F-element 5 3676 1.5 1.5 1.5 2.0 3692 chr2L 12791606 intergenic not near genes chr2L 12793452 intergenic not near genes chr2L 12795298 intergenic not near genes chr2L_5_12790001 chr2L_12790001 D8 281 chr2L 12861695 12861722 chr2L 12863163 12863190 hobo 8 1468 3.0 4.5 3.8 1.7 1495 chr2L 12861695 intergenic not near genes chr2L 12862442 intergenic not near genes chr2L 12863190 intergenic not near genes chr2L_8_12860001 chr2L_12860001 D8 283 chr2L 12894020 12894053 chr2L 12895487 12895516 hobo 17 1467 4.5 4.0 4.2 3.3 1496 chr2L 12894020 intergenic not near genes chr2L 12894768 intergenic not near genes chr2L 12895516 intergenic not near genes chr2L_17_12890001 chr2L_12890001 D8 285 chr2L 12933848 12933881 chr2L 12941316 12941349 blood 13 7468 4.5 6.0 5.2 2.1 7501 chr2L 12933848 intergenic not near genes chr2L 12937598 intergenic not near genes chr2L 12941349 intergenic not near genes chr2L_13_12935001 chr2L_12935001 D8 294 chr2L 13405646 13405676 chr2L 13410444 13410474 Doc 12 4797 4.5 0.5 2.5 3.4 4828 chr2L 13405646 exon CG7110 + chr2L 13408060 intron CG7110 + chr2L 13410474 intron CG7110 + chr2L_12_13405001 chr2L_13405001 D8 297 chr2L 13449462 13449495 chr2L 13456898 13456932 Quasimodo 15 7437 4.5 4.5 4.5 2.7 7470 chr2L 13449462 intron,5` UTR CG42784 +,Hsp60D - chr2L 13453197 intron CG42784 + chr2L 13456932 intron CG42784 + chr2L_15_13450001 chr2L_13450001 D8 298 chr2L 13481448 13481472 chr2L 13482056 13482080 jockey 18 608 7.0 7.0 7.0 2.2 632 chr2L 13481448 intron CG42784 + chr2L 13481764 intron CG42784 + chr2L 13482080 intron CG42784 + chr2L_18_13480001 chr2L_13480001 D8 300 chr2L 13761803 13761832 chr2L 13762915 13762944 Doc 10 1112 3.5 3.0 3.2 2.4 1141 chr2L 13761803 intron TM9SF4 + chr2L 13762374 intron TM9SF4 + chr2L 13762944 intron TM9SF4 + chr2L_10_13760001 chr2L_13760001 D8 302 chr2L 13853081 13853115 chr2L 13862232 13862266 roo 14 9151 6.5 4.0 5.2 2.3 9185 chr2L 13853081 intron CenG1A + chr2L 13857674 intron CenG1A + chr2L 13862266 intron CenG1A + chr2L_14_13855001 chr2L_13855001 D8 317 chr2L 14642569 14642598 chr2L 14651731 14651762 roo 13 9164 3.5 2.5 3.0 3.2 9193 chr2L 14642569 intron osp - chr2L 14647166 intron osp - chr2L 14651762 intron osp - chr2L_13_14645001 chr2L_14645001 D8 320 chr2L 14803876 14803910 chr2L 14809080 14809114 copia 11 5204 3.5 4.0 3.8 2.3 5238 chr2L 14803876 intergenic not near genes chr2L 14806495 intergenic not near genes chr2L 14809114 intergenic not near genes chr2L_11_14805001 chr2L_14805001 D8 323 chr2L 14889955 14889987 chr2L 14890381 14890413 jockey 5 426 2.0 4.0 3.0 1.2 458 chr2L 14889955 intergenic not near genes chr2L 14890184 intergenic not near genes chr2L 14890413 intergenic not near genes chr2L_5_14890001 chr2L_14890001 D8 334 chr2L 15446048 15446082 chr2L 15453518 15453552 blood 9 7470 4.5 0.5 2.5 2.6 7504 chr2L 15446048 intergenic not near genes chr2L 15449800 intergenic not near genes chr2L 15453552 intergenic not near genes chr2L_9_15445001 chr2L_15445001 D8 336 chr2L 15586413 15586437 chr2L 15593466 15593490 297 6 7053 3.0 4.5 3.8 1.2 7077 chr2L 15586413 intergenic not near genes chr2L 15589952 intergenic not near genes chr2L 15593490 intergenic not near genes chr2L_6_15585001 chr2L_15585001 D8 339 chr2L 15773571 15773583 chr2L 15773653 15773664 INE-1 4 82 2.5 1.0 1.8 1.4 93 chr2L 15773571 intergenic CG31826 - chr2L 15773618 intergenic not near genes chr2L 15773664 intergenic not near genes chr2L_4_15770001 chr2L_15770001 D8 342 chr2L 15956025 15956059 chr2L 15957493 15957527 hobo 6 1468 3.0 3.5 3.2 1.4 1502 chr2L 15956025 intron beat-Ib - chr2L 15956776 intron beat-Ib - chr2L 15957527 intron beat-Ib - chr2L_6_15955001 chr2L_15955001 D8 346 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 20 145889 23.0 10.5 16.8 1.1 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_20_16140001 chr2L_16140001 D8 347 chr2L 16141162 16141196 chr2L 16146370 16146404 copia 8 5208 3.5 4.0 3.8 1.7 5242 chr2L 16141162 intergenic not near genes chr2L 16143783 intergenic not near genes chr2L 16146404 intergenic not near genes chr2L_8_16140001 chr2L_16140001 D8 348 chr2L 16153735 16153743 chr2L 16160790 16160798 297 6 7055 8.5 3.5 6.0 0.9 7063 chr2L 16153735 intergenic not near genes chr2L 16157266 intergenic not near genes chr2L 16160798 intergenic not near genes chr2L_6_16155001 chr2L_16155001 D8 351 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 10 145889 23.0 10.5 16.8 0.6 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_10_16140001 chr2L_16140001 D8 352 chr2L 16280255 16280287 chr2L 16281427 16281459 1360 13 1172 4.5 4.5 4.5 2.4 1204 chr2L 16280255 intron crp - chr2L 16280857 intron crp - chr2L 16281459 intron crp - chr2L_13_16280001 chr2L_16280001 D8 356 chr2L 16511960 16511993 chr2L 16519075 16519108 HMS-Beagle 4 7118 1.0 0.0 0.5 2.7 7148 chr2L 16511960 intron CG5953 - chr2L 16515534 intron CG5953 - chr2L 16519108 intron CG5953 - chr2L_4_16515001 chr2L_16515001 D8 370 chr2L 16958105 16958136 chr2L 16962894 16962925 Doc 8 4789 2.5 3.5 3.0 2.0 4820 chr2L 16958105 intergenic not near genes chr2L 16960515 intergenic not near genes chr2L 16962925 intergenic not near genes chr2L_8_16960001 chr2L_16960001 D8 383 chr2L 17199159 17199168 chr2L 17200627 17200636 hobo 4 1468 3.0 1.5 2.2 1.2 1477 chr2L 17199159 intron beat-IIIc - chr2L 17199898 intron beat-IIIc - chr2L 17200636 intron beat-IIIc - chr2L_4_17195001 chr2L_17195001 D8 393 chr2L 17819919 17819954 chr2L 17825123 17825158 copia 8 5204 1.5 3.0 2.2 2.5 5239 chr2L 17819919 intron CadN2 - chr2L 17822538 intron CadN2 - chr2L 17825158 intron CadN2 - chr2L_8_17820001 chr2L_17820001 D8 394 chr2L 17911954 17911983 chr2L 17914141 17914170 pogo 7 2187 6.0 3.5 4.8 1.2 2216 chr2L 17911954 intergenic not near genes chr2L 17913062 intergenic not near genes chr2L 17914170 intergenic CG43271 - chr2L_7_17910001 chr2L_17910001 D8 402 chr2L 18051872 18051900 chr2L 18061020 18061048 roo 8 9148 5.0 3.5 4.2 1.5 9176 chr2L 18051872 intron rdo + chr2L 18056460 intron rdo + chr2L 18061048 intron rdo + chr2L_8_18055001 chr2L_18055001 D8 410 chr2L 18408031 18408050 chr2L 18412816 18412835 Doc 6 4785 2.0 3.0 2.5 1.7 4804 chr2L 18408031 intergenic not near genes chr2L 18410433 intergenic not near genes chr2L 18412835 intergenic not near genes chr2L_6_18410001 chr2L_18410001 D8 425 chr2L 19147367 19147402 chr2L 19154403 19154438 297 6 7036 2.5 3.0 2.8 1.6 7071 chr2L 19147367 intron brat + chr2L 19150902 intron brat + chr2L 19154438 intron brat + chr2L_6_19150001 chr2L_19150001 D8 431 chr2L 19345018 19345040 chr2L 19357228 19357247 blood 7 12209 2.5 3.5 3.0 1.8 12229 chr2L 19345018 intron dnt - chr2L 19351132 intron dnt - chr2L 19357247 intron dnt - chr2L_7_19350001 chr2L_19350001 D8 443 chr2L 19620093 19620095 chr2L 19621083 19621085 jockey 4 990 21.0 5.5 13.2 0.3 992 chr2L 19620093 intron Lar + chr2L 19620589 intron Lar + chr2L 19621085 intron Lar + chr2L_4_19620001 chr2L_19620001 D8 444 chr2L 19620096 19620126 chr2L 19621081 19621116 jockey 17 989 11.0 5.5 8.2 1.8 1020 chr2L 19620096 intron Lar + chr2L 19620606 intron Lar + chr2L 19621116 intron Lar + chr2L_17_19620001 chr2L_19620001 D8 445 chr2L 19652568 19652600 chr2L 19674005 19674037 opus 10 21437 3.5 2.0 2.8 2.6 21469 chr2L 19652568 intron Lar + chr2L 19663302 intron Lar + chr2L 19674037 intron Lar + chr2L_10_19660001 chr2L_19660001 D8 447 chr2L 19703537 19703569 chr2L 19712674 19712706 roo 7 9137 5.0 7.0 6.0 1.0 9169 chr2L 19703537 intron Lar + chr2L 19708122 intron Lar + chr2L 19712706 intron Lar + chr2L_7_19705001 chr2L_19705001 D8 448 chr2L 19737355 19737385 chr2L 19740825 19740855 1360 13 3470 8.0 11.5 9.8 1.2 3500 chr2L 19737355 intergenic Nf-YB + chr2L 19739105 intergenic not near genes chr2L 19740855 intergenic not near genes chr2L_13_19735001 chr2L_19735001 D8 450 chr2L 19762815 19762839 chr2L 19763058 19763081 pogo 8 243 2.5 4.0 3.2 1.9 266 chr2L 19762815 intron fbp - chr2L 19762948 intron fbp - chr2L 19763081 intron fbp - chr2L_8_19760001 chr2L_19760001 D8 455 chr2L 20005873 20005903 chr2L 20010950 20010980 flea 10 5076 1.5 5.5 3.5 2.2 5107 chr2L 20005873 intron CG43861 - chr2L 20008426 intron CG43861 - chr2L 20010980 intron CG43861 - chr2L_10_20005001 chr2L_20005001 D8 457 chr2L 20272111 20272141 chr2L 20282823 20282853 copia 12 10712 4.5 6.0 5.2 1.9 10742 chr2L 20272111 intergenic not near genes chr2L 20277482 intergenic not near genes chr2L 20282853 intergenic not near genes chr2L_12_20275001 chr2L_20275001 D8 459 chr2L 20303159 20303192 chr2L 20310628 20310661 blood 8 7469 0.5 1.5 1.0 4.0 7502 chr2L 20303159 intergenic not near genes chr2L 20306910 intergenic not near genes chr2L 20310661 intergenic not near genes chr2L_8_20305001 chr2L_20305001 D8 460 chr2L 20372226 20372244 chr2L 20372468 20372486 pogo 7 242 2.5 4.0 3.2 1.7 260 chr2L 20372226 intergenic Ugt37a1 - chr2L 20372356 intergenic Ugt37a1 - chr2L 20372486 exon Ugt37a1 - chr2L_7_20370001 chr2L_20370001 D8 463 chr2L 20568660 20568686 chr2L 20569051 20569077 X-element 7 391 4.0 3.0 3.5 1.6 417 chr2L 20568660 intron CR45347 + chr2L 20568868 intron CR45347 + chr2L 20569077 intron CR45347 + chr2L_7_20565001 chr2L_20565001 D8 464 chr2L 20576217 20576249 chr2L 20583686 20583718 blood 7 7469 3.0 2.0 2.5 2.0 7501 chr2L 20576217 intergenic CR45347 + chr2L 20579968 intergenic not near genes chr2L 20583718 3` UTR CR44909 - chr2L_7_20575001 chr2L_20575001 D8 472 chr2L 20901470 20901484 chr2L 20902635 20902649 1360 6 1165 3.0 4.0 3.5 1.3 1179 chr2L 20901470 intron,intron CG43739 -,sky - chr2L 20902060 intron,intron CG43739 -,sky - chr2L 20902649 intron,intron CG43739 -,sky - chr2L_6_20900001 chr2L_20900001 D8 475 chr2L 20976640 20976672 chr2L 20981456 20981488 X-element 4 4816 4.0 2.0 3.0 1.0 4848 chr2L 20976640 intron CG42238 - chr2L 20979064 intron CG42238 - chr2L 20981488 intron CG42238 - chr2L_4_20975001 chr2L_20975001 D8 478 chr2L 21020271 21020299 chr2L 21023949 21023976 NOF 9 3678 2.5 4.5 3.5 2.0 3705 chr2L 21020271 intron CG42238 - chr2L 21022124 intron CG42238 - chr2L 21023976 intron CG42238 - chr2L_9_21020001 chr2L_21020001 D8 479 chr2L 21041133 21041164 chr2L 21049395 21049426 Tirant 7 8262 1.0 3.0 2.0 2.3 8293 chr2L 21041133 intron CG42238 - chr2L 21045280 intron CG42238 - chr2L 21049426 intron CG42238 - chr2L_7_21045001 chr2L_21045001 D8 486 chr2L 21597041 21597055 chr2L 21604786 21604800 roo 7 7745 1.0 2.5 1.8 2.5 7759 chr2L 21597041 intergenic not near genes chr2L 21600920 intergenic not near genes chr2L 21604800 intergenic not near genes chr2L_7_21600001 chr2L_21600001 D8 488 chr2L 21691830 21691842 chr2L 21698301 21698313 Burdock 4 6471 2.0 0.0 1.0 2.0 6483 chr2L 21691830 intron CG31619 + chr2L 21695072 intron CG31619 + chr2L 21698313 intron CG31619 + chr2L_4_21695001 chr2L_21695001 D8 497 chr2L 21981679 21981710 chr2L 21990845 21990873 roo 13 9166 2.5 4.0 3.2 3.1 9194 chr2L 21981679 exon CG2528 - chr2L 21986276 intron CG2528 - chr2L 21990873 exon CG2528 - chr2L_13_21985001 chr2L_21985001 D8 501 chr2L 22258619 22258643 chr2L 22260744 22260768 G6 12 2125 6.0 10.5 8.2 1.3 2149 chr2L 22258619 intergenic Tif-IA + chr2L 22259694 intergenic not near genes chr2L 22260768 intergenic not near genes chr2L_12_22255001 chr2L_22255001 D8 502 chr2L 22581981 22582002 chr2L 22583771 22583792 S-element 6 1790 0.0 4.0 2.0 2.0 1811 chr2L 22581981 intron CG17494 + chr2L 22582886 intron CG17494 + chr2L 22583792 intron CG17494 + chr2L_6_22580001 chr2L_22580001 D8 503 chr2L 22679802 22679832 chr2L 22684575 22684605 F-element 8 4772 3.0 3.5 3.2 1.9 4803 chr2L 22679802 intron CG40006 - chr2L 22682204 intron CG40006 - chr2L 22684605 intron CG40006 - chr2L_8_22680001 chr2L_22680001 D8 505 chr2L 22776418 22776447 chr2L 22778208 22778237 S-element 8 1790 1.0 3.0 2.0 2.7 1819 chr2L 22776418 intergenic not near genes chr2L 22777328 intergenic not near genes chr2L 22778237 intergenic not near genes chr2L_8_22775001 chr2L_22775001 D8 506 chr2L 23006695 23006706 chr2L 23007003 23007014 Osvaldo 5 308 13.0 15.5 14.2 0.3 319 chr2L 23006695 intron Cht3 - chr2L 23006854 intron Cht3 - chr2L 23007014 intron Cht3 - chr2L_5_23005001 chr2L_23005001 D8 507 chr2R 529321 529357 chr2R 537947 537983 Max-element 13 8626 2.0 3.0 2.5 3.7 8662 chr2R 529321 intron CG40378 + chr2R 533652 intron CG40378 + chr2R 537983 intron CG40378 + chr2R_13_530001 chr2R_530001 D8 508 chr2R 552752 552765 chr2R 553971 553984 1360 4 1219 19.5 23.5 21.5 0.2 1232 chr2R 552752 intron CG40378 + chr2R 553368 intron CG40378 + chr2R 553984 intron CG40378 + chr2R_4_550001 chr2R_550001 D8 509 chr2R 1082365 1082385 chr2R 1087142 1087162 Doc 24 4777 13.0 14.5 13.8 1.6 4797 chr2R 1082365 intron rl + chr2R 1084764 intron rl + chr2R 1087162 intron rl + chr2R_24_1080001 chr2R_1080001 D8 512 chr2R 2498985 2498993 chr2R 2508133 2508141 roo 4 9148 5.0 1.5 3.2 1.0 9156 chr2R 2498985 intron MFS17 - chr2R 2503563 intron MFS17 - chr2R 2508141 intron MFS17 - chr2R_4_2500001 chr2R_2500001 D8 514 chr2R 2591545 2591555 chr2R 2594222 2594232 roo 4 2677 17.5 17.0 17.2 0.2 2687 chr2R 2591545 intergenic not near genes chr2R 2592888 intergenic not near genes chr2R 2594232 intergenic not near genes chr2R_4_2590001 chr2R_2590001 D8 521 chr2R 4622954 4622980 chr2R 4624112 4624129 1360 7 1158 6.0 7.0 6.5 0.9 1175 chr2R 4622954 intergenic CR44101 - chr2R 4623542 intergenic not near genes chr2R 4624129 intergenic not near genes chr2R_7_4620001 chr2R_4620001 D8 523 chr2R 4750350 4750375 chr2R 4751508 4751533 1360 4 1158 4.0 4.5 4.2 0.8 1183 chr2R 4750350 intron conu + chr2R 4750942 intron conu + chr2R 4751533 intron conu + chr2R_4_4750001 chr2R_4750001 D8 525 chr2R 4838871 4838892 chr2R 4840395 4840410 transib2 9 1523 5.5 3.5 4.5 1.6 1539 chr2R 4838871 intergenic not near genes chr2R 4839640 intergenic not near genes chr2R 4840410 intergenic not near genes chr2R_9_4835001 chr2R_4835001 D8 541 chr2R 5417993 5418023 chr2R 5420626 5420654 Burdock 11 2633 2.0 1.5 1.8 3.9 2661 chr2R 5417993 intron laccase2 + chr2R 5419324 intron laccase2 + chr2R 5420654 intron laccase2 + chr2R_11_5415001 chr2R_5415001 D8 551 chr2R 5902154 5902186 chr2R 5909714 5909746 17.6 7 7560 3.0 1.0 2.0 2.3 7592 chr2R 5902154 intron CG43366 + chr2R 5905950 intron CG43366 + chr2R 5909746 intron CG43366 + chr2R_7_5905001 chr2R_5905001 D8 555 chr2R 6096713 6096752 chr2R 6101912 6101940 BS 26 5196 6.5 4.0 5.2 4.2 5227 chr2R 6096713 intron EcR - chr2R 6099326 intron EcR - chr2R 6101940 intron EcR - chr2R_26_6095001 chr2R_6095001 D8 565 chr2R 6579770 6579806 chr2R 6584857 6584894 flea 15 5087 2.0 1.0 1.5 6.0 5124 chr2R 6579770 intron jing + chr2R 6582332 intron jing + chr2R 6584894 intron jing + chr2R_15_6580001 chr2R_6580001 D8 571 chr2R 6952169 6952184 chr2R 6959750 6959765 opus 6 7581 2.0 2.5 2.2 1.9 7596 chr2R 6952169 intron,intron mim -,CheB42c - chr2R 6955967 intron,intron mim -,CheB42c - chr2R 6959765 intron,intron mim -,CheB42c - chr2R_6_6955001 chr2R_6955001 D8 574 chr2R 7139947 7139956 chr2R 7141440 7141449 hopper2 5 1493 4.0 10.5 7.2 0.6 1502 chr2R 7139947 intergenic not near genes chr2R 7140698 intergenic not near genes chr2R 7141449 intergenic not near genes chr2R_5_7140001 chr2R_7140001 D8 577 chr2R 7196567 7196601 chr2R 7201343 7201377 F-element 8 4776 3.5 1.5 2.5 2.3 4810 chr2R 7196567 intron pk + chr2R 7198972 intron pk + chr2R 7201377 intron pk + chr2R_8_7195001 chr2R_7195001 D8 578 chr2R 7235818 7235852 chr2R 7240911 7240945 jockey 18 5092 3.5 3.0 3.2 4.3 5127 chr2R 7235818 intergenic not near genes chr2R 7238382 intergenic not near genes chr2R 7240945 intergenic not near genes chr2R_18_7235001 chr2R_7235001 D8 580 chr2R 7434892 7434911 chr2R 7439194 7439213 Juan 9 4302 4.5 5.5 5.0 1.5 4321 chr2R 7434892 intergenic so + chr2R 7437052 intergenic not near genes chr2R 7439213 intergenic not near genes chr2R_9_7435001 chr2R_7435001 D8 581 chr2R 7608413 7608436 chr2R 7613617 7613629 I-element 6 5202 4.0 0.0 2.0 2.0 5216 chr2R 7608413 intron CG1358 - chr2R 7611021 intron CG1358 - chr2R 7613629 intron CG1358 - chr2R_6_7610001 chr2R_7610001 D8 583 chr2R 7815669 7815704 chr2R 7822139 7822174 Burdock 11 6470 6.0 5.5 5.8 1.6 6505 chr2R 7815669 intergenic CG1882 + chr2R 7818922 intergenic not near genes chr2R 7822174 3` UTR cathD - chr2R_11_7815001 chr2R_7815001 D8 585 chr2R 7869187 7869216 chr2R 7873974 7874003 Doc 9 4787 4.0 4.0 4.0 1.8 4816 chr2R 7869187 intron Dgk - chr2R 7871595 intron Dgk - chr2R 7874003 intron Dgk - chr2R_9_7870001 chr2R_7870001 D8 596 chr2R 8160936 8160951 chr2R 8161027 8161042 1360 8 91 15.5 20.0 17.8 0.4 106 chr2R 8160936 intron CG8708 - chr2R 8160989 intron CG8708 - chr2R 8161042 intron CG8708 - chr2R_8_8160001 chr2R_8160001 D8 597 chr2R 8330859 8330890 chr2R 8331346 8331377 roo 13 487 3.5 6.0 4.8 2.2 518 chr2R 8330859 intron pdm3 + chr2R 8331118 intron pdm3 + chr2R 8331377 intron pdm3 + chr2R_13_8330001 chr2R_8330001 D8 599 chr2R 8398207 8398234 chr2R 8402989 8403016 Doc 16 4781 6.0 3.5 4.8 2.8 4809 chr2R 8398207 intron CG2121 - chr2R 8400612 intron CG2121 - chr2R 8403016 intron CG2121 - chr2R_16_8400001 chr2R_8400001 D8 604 chr2R 8722762 8722794 chr2R 8723004 8723036 pogo 12 242 4.0 7.5 5.8 1.8 274 chr2R 8722762 intron CG14767 - chr2R 8722899 intron CG14767 - chr2R 8723036 intron CG14767 - chr2R_12_8720001 chr2R_8720001 D8 609 chr2R 9151301 9151327 chr2R 9157772 9157798 Burdock 10 6471 3.0 1.0 2.0 3.3 6497 chr2R 9151301 exon CG30345 + chr2R 9154550 intergenic not near genes chr2R 9157798 intergenic CG8008 - chr2R_10_9150001 chr2R_9150001 D8 611 chr2R 9212690 9212725 chr2R 9213177 9213212 roo 16 487 4.5 4.5 4.5 2.9 522 chr2R 9212690 intergenic CR45309 + chr2R 9212951 intergenic CR45309 + chr2R 9213212 5` UTR CR45309 + chr2R_16_9210001 chr2R_9210001 D8 621 chr2R 9480079 9480110 chr2R 9490611 9490642 roo 7 10532 1.5 2.5 2.0 2.3 10563 chr2R 9480079 intergenic not near genes chr2R 9485360 intergenic not near genes chr2R 9490642 intergenic not near genes chr2R_7_9485001 chr2R_9485001 D8 631 chr2R 9726611 9726640 chr2R 9734163 9734192 17.6 9 7550 3.5 2.0 2.8 2.4 7581 chr2R 9726611 intron sqa - chr2R 9730402 intron sqa - chr2R 9734192 intron sqa - chr2R_9_9730001 chr2R_9730001 D8 633 chr2R 9871038 9871056 chr2R 9871525 9871543 roo 4 487 11.0 11.0 11.0 0.3 505 chr2R 9871038 intron cbx - chr2R 9871290 intron cbx - chr2R 9871543 intron,5` UTR cbx -,CG18446 + chr2R_4_9870001 chr2R_9870001 D8 634 chr2R 9945436 9945469 chr2R 9945633 9945666 BS 4 197 3.0 3.5 3.2 1.0 230 chr2R 9945436 intron Mef2 - chr2R 9945551 intron Mef2 - chr2R 9945666 intron Mef2 - chr2R_4_9945001 chr2R_9945001 D8 638 chr2R 10005849 10005879 chr2R 10007015 10007041 1360 21 1165 7.0 5.5 6.2 2.9 1192 chr2R 10005849 intron Pka-R2 - chr2R 10006445 intron Pka-R2 - chr2R 10007041 intron Pka-R2 - chr2R_21_10005001 chr2R_10005001 D8 646 chr2R 10176877 10176913 chr2R 10186045 10186081 roo 11 9168 3.5 2.0 2.8 2.9 9204 chr2R 10176877 intron KCNQ - chr2R 10181479 intron KCNQ - chr2R 10186081 intron KCNQ - chr2R_11_10180001 chr2R_10180001 D8 658 chr2R 10585576 10585591 chr2R 10594153 10594175 Tirant 8 8583 4.0 3.5 3.8 1.7 8599 chr2R 10585576 intron psq + chr2R 10589876 intron psq + chr2R 10594175 intron psq + chr2R_8_10585001 chr2R_10585001 D8 665 chr2R 10948024 10948059 chr2R 10955576 10955611 17.6 15 7552 1.0 3.5 2.2 4.7 7587 chr2R 10948024 intergenic not near genes chr2R 10951818 intergenic not near genes chr2R 10955611 intergenic not near genes chr2R_15_10950001 chr2R_10950001 D8 667 chr2R 10979662 10979678 chr2R 10980133 10980149 297 5 471 2.5 2.5 2.5 1.4 487 chr2R 10979662 intergenic not near genes chr2R 10979906 intergenic not near genes chr2R 10980149 intergenic not near genes chr2R_5_10975001 chr2R_10975001 D8 668 chr2R 11019886 11019908 chr2R 11024953 11024975 jockey 7 5065 5.0 4.5 4.8 1.2 5089 chr2R 11019886 intron luna - chr2R 11022430 intron luna - chr2R 11024975 intron luna - chr2R_7_11020001 chr2R_11020001 D8 669 chr2R 11134110 11134137 chr2R 11134352 11134379 pogo 8 242 1.5 0.5 1.0 4.0 269 chr2R 11134110 intergenic not near genes chr2R 11134244 intergenic not near genes chr2R 11134379 intergenic not near genes chr2R_8_11130001 chr2R_11130001 D8 671 chr2R 11207812 11207846 chr2R 11208005 11208039 BS 11 192 2.5 2.5 2.5 3.1 227 chr2R 11207812 intron shn + chr2R 11207926 intron shn + chr2R 11208039 intron shn + chr2R_11_11205001 chr2R_11205001 D8 676 chr2R 11415528 11415549 chr2R 11418678 11418697 opus 7 3150 2.0 5.0 3.5 1.6 3169 chr2R 11415528 intron Drip - chr2R 11417112 intron Drip - chr2R 11418697 intron Drip - chr2R_7_11415001 chr2R_11415001 D8 677 chr2R 11472647 11472679 chr2R 11473845 11473877 pogo 12 1198 4.0 4.5 4.2 2.3 1230 chr2R 11472647 intergenic not near genes chr2R 11473262 intergenic not near genes chr2R 11473877 intergenic not near genes chr2R_12_11470001 chr2R_11470001 D8 691 chr2R 12481138 12481170 chr2R 12482943 12482975 roo 21 1804 4.0 6.5 5.2 3.4 1837 chr2R 12481138 exon Dh44-R2 + chr2R 12482056 intron Dh44-R2 + chr2R 12482975 intron Dh44-R2 + chr2R_21_12480001 chr2R_12480001 D8 692 chr2R 12501695 12501726 chr2R 12503858 12503887 Rt1c 9 2158 4.5 3.5 4.0 1.8 2192 chr2R 12501695 intron fdl - chr2R 12502791 intron fdl - chr2R 12503887 intron fdl - chr2R_9_12500001 chr2R_12500001 D8 701 chr2R 12707517 12707545 chr2R 12715884 12715912 roo 4 8367 0.0 0.5 0.2 3.3 8395 chr2R 12707517 intron CG42663 + chr2R 12711714 intron CG42663 + chr2R 12715912 intron CG42663 + chr2R_4_12710001 chr2R_12710001 D8 703 chr2R 12789295 12789319 chr2R 12797656 12797683 roo 7 8363 4.5 3.5 4.0 1.4 8388 chr2R 12789295 intron,3` UTR sca +,CR45137 - chr2R 12793489 intron,intron sca +,CR45137 - chr2R 12797683 intron,3` UTR sca +,CR45137 - chr2R_7_12790001 chr2R_12790001 D8 704 chr2R 12819463 12819477 chr2R 12824527 12824541 jockey 5 5063 4.5 3.5 4.0 1.0 5078 chr2R 12819463 intergenic not near genes chr2R 12822002 intergenic not near genes chr2R 12824541 intergenic not near genes chr2R_5_12820001 chr2R_12820001 D8 708 chr2R 13136847 13136868 chr2R 13141634 13141667 Doc 7 4797 3.5 5.0 4.2 1.3 4820 chr2R 13136847 exon Cap-G + chr2R 13139257 intron Cap-G + chr2R 13141667 intron Cap-G + chr2R_7_13135001 chr2R_13135001 D8 717 chr2R 13580499 13580533 chr2R 13580850 13580883 jockey 15 350 0.5 4.0 2.2 4.7 384 chr2R 13580499 3` UTR CG6191 - chr2R 13580691 3` UTR,3` UTR CG6191 -,CG45088 - chr2R 13580883 3` UTR,3` UTR CG6191 -,CG45088 - chr2R_15_13580001 chr2R_13580001 D8 725 chr2R 13905602 13905633 chr2R 13907585 13907614 Rt1a 15 1983 8.0 7.5 7.8 1.7 2012 chr2R 13905602 intron shot - chr2R 13906608 intron shot - chr2R 13907614 intron shot - chr2R_15_13905001 chr2R_13905001 D8 730 chr2R 14394227 14394243 chr2R 14399017 14399033 Doc 4 4790 5.5 2.5 4.0 0.8 4806 chr2R 14394227 intergenic not near genes chr2R 14396630 intergenic not near genes chr2R 14399033 intergenic not near genes chr2R_4_14395001 chr2R_14395001 D8 731 chr2R 14467305 14467324 chr2R 14476464 14476483 roo 6 9158 2.0 2.5 2.2 1.9 9178 chr2R 14467305 intergenic not near genes chr2R 14471894 intergenic not near genes chr2R 14476483 5` UTR CR44462 + chr2R_6_14470001 chr2R_14470001 D8 739 chr2R 14889205 14889235 chr2R 14897814 14897844 Max-element 9 8609 5.0 0.5 2.8 2.4 8639 chr2R 14889205 intergenic Cyp6a8 - chr2R 14893524 intergenic not near genes chr2R 14897844 intergenic not near genes chr2R_9_14890001 chr2R_14890001 D8 744 chr2R 15004724 15004759 chr2R 15005054 15005089 jockey 11 330 2.5 5.0 3.8 2.3 365 chr2R 15004724 intergenic not near genes chr2R 15004906 intergenic not near genes chr2R 15005089 intergenic not near genes chr2R_11_15000001 chr2R_15000001 D8 745 chr2R 15015460 15015489 chr2R 15022885 15022914 mdg1 10 7425 4.0 3.0 3.5 2.2 7454 chr2R 15015460 intron hbs + chr2R 15019187 intron hbs + chr2R 15022914 intron hbs + chr2R_10_15015001 chr2R_15015001 D8 748 chr2R 15119317 15119351 chr2R 15127799 15127833 Tirant 11 8481 5.5 3.5 4.5 2.0 8516 chr2R 15119317 intron chn + chr2R 15123575 intron chn + chr2R 15127833 intron chn + chr2R_11_15120001 chr2R_15120001 D8 763 chr2R 16539637 16539668 chr2R 16544847 16544878 copia 5 5210 1.0 3.0 2.0 1.7 5241 chr2R 16539637 intergenic not near genes chr2R 16542258 intergenic not near genes chr2R 16544878 intergenic not near genes chr2R_5_16540001 chr2R_16540001 D8 767 chr2R 17147248 17147269 chr2R 17152280 17152301 jockey 8 5032 4.0 4.0 4.0 1.6 5053 chr2R 17147248 intergenic not near genes chr2R 17149774 intergenic not near genes chr2R 17152301 intergenic not near genes chr2R_8_17145001 chr2R_17145001 D8 769 chr2R 17236504 17236541 chr2R 17241711 17241746 copia 11 5205 2.0 2.5 2.2 3.4 5242 chr2R 17236504 intron mbl + chr2R 17239125 intron mbl + chr2R 17241746 intron mbl + chr2R_11_17235001 chr2R_17235001 D8 777 chr2R 18045673 18045682 chr2R 18046026 18046035 jockey 4 353 2.5 1.5 2.0 1.3 362 chr2R 18045673 intergenic not near genes chr2R 18045854 intergenic not near genes chr2R 18046035 intergenic CG5767 - chr2R_4_18045001 chr2R_18045001 D8 778 chr2R 18111684 18111702 chr2R 18115553 18115571 F-element 4 3869 4.5 1.0 2.8 1.1 3887 chr2R 18111684 intergenic not near genes chr2R 18113628 intergenic not near genes chr2R 18115571 intergenic not near genes chr2R_4_18110001 chr2R_18110001 D8 783 chr2R 18358390 18358421 chr2R 18372603 18372634 roo 5 14212 3.5 2.0 2.8 1.3 14244 chr2R 18358390 intergenic not near genes chr2R 18365512 intergenic not near genes chr2R 18372634 intergenic not near genes chr2R_5_18365001 chr2R_18365001 D8 787 chr2R 18575811 18575830 chr2R 18581986 18582019 3S18 12 6188 3.5 5.0 4.2 2.3 6208 chr2R 18575811 intron GEFmeso - chr2R 18578915 intron GEFmeso - chr2R 18582019 intron GEFmeso - chr2R_12_18575001 chr2R_18575001 D8 788 chr2R 18590864 18590901 chr2R 18600017 18600054 roo 12 9153 4.0 3.5 3.8 2.5 9190 chr2R 18590864 intron GEFmeso - chr2R 18595459 intron GEFmeso - chr2R 18600054 intron GEFmeso - chr2R_12_18595001 chr2R_18595001 D8 807 chr2R 19715852 19715857 chr2R 19723322 19723327 blood 4 7470 10.5 4.5 7.5 0.5 7475 chr2R 19715852 intergenic not near genes chr2R 19719590 intergenic not near genes chr2R 19723327 intergenic not near genes chr2R_4_19715001 chr2R_19715001 D8 809 chr2R 19776597 19776630 chr2R 19779921 19779954 jockey 11 3324 1.5 5.5 3.5 2.4 3357 chr2R 19776597 intergenic not near genes chr2R 19778276 intergenic not near genes chr2R 19779954 intergenic not near genes chr2R_11_19775001 chr2R_19775001 D8 813 chr2R 19914842 19914875 chr2R 19922255 19922288 mdg1 8 7413 5.5 2.5 4.0 1.6 7446 chr2R 19914842 intergenic not near genes chr2R 19918565 intergenic not near genes chr2R 19922288 intergenic not near genes chr2R_8_19915001 chr2R_19915001 D8 816 chr2R 19957438 19957464 chr2R 19962630 19962646 copia 13 5201 3.5 3.5 3.5 2.9 5208 chr2R 19957438 intergenic CG44623 + chr2R 19960042 intergenic not near genes chr2R 19962646 intergenic not near genes chr2R_13_19960001 chr2R_19960001 D8 819 chr2R 20069257 20069274 chr2R 20071888 20071905 opus 4 2631 4.0 5.0 4.5 0.7 2648 chr2R 20069257 intergenic not near genes chr2R 20070581 intergenic not near genes chr2R 20071905 intergenic not near genes chr2R_4_20070001 chr2R_20070001 D8 824 chr2R 20739442 20739476 chr2R 20744211 20744244 F-element 16 4769 3.0 6.0 4.5 2.9 4802 chr2R 20739442 intron dpr + chr2R 20741843 intron dpr + chr2R 20744244 intron dpr + chr2R_16_20740001 chr2R_20740001 D8 825 chr2R 20783310 20783331 chr2R 20788083 20788104 F-element 7 4773 1.0 5.0 3.0 1.8 4794 chr2R 20783310 intergenic not near genes chr2R 20785707 intergenic not near genes chr2R 20788104 intergenic CG43666 - chr2R_7_20785001 chr2R_20785001 D8 830 chr2R 21151116 21151140 chr2R 21153750 21153774 opus 15 2634 6.0 6.0 6.0 2.1 2658 chr2R 21151116 intron CG30389 - chr2R 21152445 intron CG30389 - chr2R 21153774 intron CG30389 - chr2R_15_21150001 chr2R_21150001 D8 840 chr2R 21753087 21753116 chr2R 21753573 21753601 roo 10 484 4.5 4.5 4.5 1.8 514 chr2R 21753087 intergenic not near genes chr2R 21753344 intergenic not near genes chr2R 21753601 intergenic not near genes chr2R_10_21750001 chr2R_21750001 D8 841 chr2R 21809532 21809557 chr2R 21817773 21817798 roo 5 8241 3.5 5.0 4.2 1.0 8266 chr2R 21809532 intergenic not near genes chr2R 21813665 intergenic not near genes chr2R 21817798 intergenic not near genes chr2R_5_21810001 chr2R_21810001 D8 855 chr2R 22349689 22349725 chr2R 22351474 22351510 jockey 12 1785 3.5 4.0 3.8 2.5 1821 chr2R 22349689 intron Liprin-gamma - chr2R 22350600 intron Liprin-gamma - chr2R 22351510 intron Liprin-gamma - chr2R_12_22350001 chr2R_22350001 D8 856 chr2R 22360380 22360397 chr2R 22360814 22360831 jockey 8 434 9.5 2.5 6.0 1.1 451 chr2R 22360380 intron Liprin-gamma - chr2R 22360606 intron Liprin-gamma - chr2R 22360831 intron Liprin-gamma - chr2R_8_22360001 chr2R_22360001 D8 862 chr2R 22525743 22525786 chr2R 22529299 22529331 jockey 13 3555 2.5 3.0 2.8 3.4 3588 chr2R 22525743 intron px - chr2R 22527537 intron px - chr2R 22529331 intron px - chr2R_13_22525001 chr2R_22525001 D8 867 chr2R 22774961 22775002 chr2R 22775381 22775422 jockey 15 420 2.5 2.5 2.5 4.3 461 chr2R 22774961 intron CG42260 - chr2R 22775192 intron CG42260 - chr2R 22775422 intron CG42260 - chr2R_15_22775001 chr2R_22775001 D8 882 chr2R 23529571 23529606 chr2R 23537148 23537171 412 16 7575 2.5 5.5 4.0 3.2 7600 chr2R 23529571 intron bw - chr2R 23533371 intron bw - chr2R 23537171 exon bw - chr2R_16_23530001 chr2R_23530001 D8 890 chr2R 23914311 23914332 chr2R 23921936 23921957 412 15 7623 4.5 12.5 8.5 1.6 7646 chr2R 23914311 exon kcc + chr2R 23918134 intron kcc + chr2R 23921957 intron kcc + chr2R_15_23915001 chr2R_23915001 D8 894 chr2R 24147066 24147094 chr2R 24154645 24154673 412 15 7579 3.0 3.0 3.0 3.8 7607 chr2R 24147066 intron Dat + chr2R 24150870 intron Dat + chr2R 24154673 intron Dat + chr2R_15_24150001 chr2R_24150001 D8 895 chr2R 24177243 24177262 chr2R 24184729 24184748 412 6 7486 3.5 5.0 4.2 1.2 7505 chr2R 24177243 3` UTR Nop60B + chr2R 24180996 intron Nop60B + chr2R 24184748 3` UTR Nop60B + chr2R_6_24180001 chr2R_24180001 D8 901 chr2R 24647588 24647618 chr2R 24655146 24655176 412 8 7558 4.5 5.5 5.0 1.3 7588 chr2R 24647588 intergenic not near genes chr2R 24651382 intergenic not near genes chr2R 24655176 intergenic not near genes chr2R_8_24650001 chr2R_24650001 D8 902 chr2R 24727883 24727917 chr2R 24735392 24735426 mdg1 17 7509 2.5 6.5 4.5 3.1 7543 chr2R 24727883 intron Mid1 - chr2R 24731654 intron Mid1 - chr2R 24735426 intron Mid1 - chr2R_17_24730001 chr2R_24730001 D8 904 chr2R 24763607 24763638 chr2R 24765584 24765615 G2 17 1977 9.5 4.5 7.0 2.1 2008 chr2R 24763607 exon CG3894 + chr2R 24764611 intron CG3894 + chr2R 24765615 exon CG3894 + chr2R_17_24760001 chr2R_24760001 D8 910 chr2R 25141647 25141684 chr2R 25159338 25159375 roo 11 17691 3.0 1.5 2.2 3.4 17728 chr2R 25141647 intergenic not near genes chr2R 25150511 intergenic not near genes chr2R 25159375 intergenic not near genes chr2R_11_25150001 chr2R_25150001 D8 917 chr3L 110220 110243 chr3L 119387 119411 roo 5 9168 4.5 4.0 4.2 1.0 9191 chr3L 110220 intergenic not near genes chr3L 114816 intergenic not near genes chr3L 119411 intergenic not near genes chr3L_5_110001 chr3L_110001 D8 922 chr3L 402687 402718 chr3L 409741 409772 297 23 7054 6.5 8.0 7.2 2.8 7085 chr3L 402687 intergenic not near genes chr3L 406230 intergenic not near genes chr3L 409772 intergenic not near genes chr3L_23_405001 chr3L_405001 D8 927 chr3L 789918 789946 chr3L 790404 790432 roo 12 486 1.0 3.5 2.2 3.8 514 chr3L 789918 intergenic not near genes chr3L 790175 intergenic not near genes chr3L 790432 intergenic not near genes chr3L_12_790001 chr3L_790001 D8 928 chr3L 858002 858030 chr3L 866484 866512 Tirant 14 8481 7.0 3.5 5.2 2.3 8510 chr3L 858002 intergenic not near genes chr3L 862257 intergenic not near genes chr3L 866512 5` UTR CG12502 + chr3L_14_860001 chr3L_860001 D8 930 chr3L 925175 925207 chr3L 932602 932626 mdg1 9 7426 3.0 3.5 3.2 2.1 7451 chr3L 925175 intron Glut1 + chr3L 928900 intron Glut1 + chr3L 932626 intron Glut1 + chr3L_9_925001 chr3L_925001 D8 932 chr3L 939776 939805 chr3L 940898 940906 jockey 13 1120 2.5 4.5 3.5 2.9 1130 chr3L 939776 intron Glut1 + chr3L 940341 intron Glut1 + chr3L 940906 intron Glut1 + chr3L_13_940001 chr3L_940001 D8 936 chr3L 1154128 1154161 chr3L 1163279 1163307 roo 6 9150 3.5 1.5 2.5 1.7 9179 chr3L 1154128 intron bab2 - chr3L 1158718 intron bab2 - chr3L 1163307 intron bab2 - chr3L_6_1155001 chr3L_1155001 D8 937 chr3L 1219593 1219624 chr3L 1227327 1227358 412 16 7734 6.0 9.0 7.5 1.9 7765 chr3L 1219593 intron mwh + chr3L 1223476 intron mwh + chr3L 1227358 intron mwh + chr3L_16_1220001 chr3L_1220001 D8 944 chr3L 1424765 1424773 chr3L 1430016 1430024 Rt1a 5 5250 0.0 5.0 2.5 1.4 5259 chr3L 1424765 intron Ptp61F - chr3L 1427394 intron Ptp61F - chr3L 1430024 intron Ptp61F - chr3L_5_1425001 chr3L_1425001 D8 948 chr3L 1505995 1506030 chr3L 1513593 1513628 17.6 27 7598 12.0 11.5 11.8 2.1 7633 chr3L 1505995 intron,intron Psa +,cue - chr3L 1509812 intron,intron Psa +,cue - chr3L 1513628 intron,intron Psa +,cue - chr3L_27_1505001 chr3L_1505001 D8 952 chr3L 1740854 1740879 chr3L 1741098 1741122 pogo 8 244 7.0 5.5 6.2 1.1 268 chr3L 1740854 intron Gk + chr3L 1740988 intron Gk + chr3L 1741122 intron Gk + chr3L_8_1740001 chr3L_1740001 D8 972 chr3L 2447504 2447536 chr3L 2456661 2456693 roo 10 9156 2.0 3.0 2.5 2.9 9189 chr3L 2447504 intron CG45186 + chr3L 2452098 intron CG45186 + chr3L 2456693 intron CG45186 + chr3L_10_2450001 chr3L_2450001 D8 982 chr3L 3061287 3061316 chr3L 3069871 3069900 Tirant 8 8584 5.0 1.5 3.2 1.9 8613 chr3L 3061287 intron CG32486 - chr3L 3065594 intron CG32486 - chr3L 3069900 intron CG32486 - chr3L_8_3065001 chr3L_3065001 D8 984 chr3L 3281436 3281472 chr3L 3281933 3281969 Doc 17 496 6.5 6.0 6.2 2.4 533 chr3L 3281436 intron CG12017 + chr3L 3281702 intron CG12017 + chr3L 3281969 intron CG12017 + chr3L_17_3280001 chr3L_3280001 D8 989 chr3L 3475075 3475106 chr3L 3475520 3475551 jockey 11 445 1.5 1.0 1.2 5.0 476 chr3L 3475075 intron CG42324 + chr3L 3475313 intron CG42324 + chr3L 3475551 intron CG42324 + chr3L_11_3475001 chr3L_3475001 D8 998 chr3L 3601304 3601332 chr3L 3606616 3606644 copia 9 5312 3.0 3.5 3.2 2.1 5340 chr3L 3601304 intron Eip63E + chr3L 3603974 intron Eip63E + chr3L 3606644 intron Eip63E + chr3L_9_3600001 chr3L_3600001 D8 1007 chr3L 3833741 3833760 chr3L 3833983 3834002 pogo 5 242 3.5 2.5 3.0 1.2 261 chr3L 3833741 intron enc + chr3L 3833872 intron enc + chr3L 3834002 intron enc + chr3L_5_3830001 chr3L_3830001 D8 1016 chr3L 4901128 4901155 chr3L 4907318 4907346 diver 10 6191 2.0 4.5 3.2 2.4 6218 chr3L 4901128 intergenic CG13704 + chr3L 4904237 intergenic not near genes chr3L 4907346 intergenic not near genes chr3L_10_4900001 chr3L_4900001 D8 1023 chr3L 5458063 5458069 chr3L 5466666 5466672 Max-element 6 8603 8.0 4.5 6.2 0.8 8609 chr3L 5458063 intergenic not near genes chr3L 5462368 intergenic not near genes chr3L 5466672 intergenic not near genes chr3L_6_5460001 chr3L_5460001 D8 1027 chr3L 5537726 5537755 chr3L 5538069 5538096 jockey 5 341 2.5 1.5 2.0 1.7 370 chr3L 5537726 intergenic not near genes chr3L 5537911 intergenic CG10625 - chr3L 5538096 intergenic CG10625 - chr3L_5_5535001 chr3L_5535001 D8 1031 chr3L 5910033 5910062 chr3L 5910275 5910304 pogo 7 242 4.0 3.0 3.5 1.6 271 chr3L 5910033 intron CG13288 + chr3L 5910168 intron CG13288 + chr3L 5910304 intron CG13288 + chr3L_7_5910001 chr3L_5910001 D8 1032 chr3L 5926316 5926350 chr3L 5926507 5926541 BS 14 190 4.5 8.5 6.5 1.9 225 chr3L 5926316 intron Vap-33B + chr3L 5926428 intron Vap-33B + chr3L 5926541 intron Vap-33B + chr3L_14_5925001 chr3L_5925001 D8 1035 chr3L 6001678 6001699 chr3L 6004379 6004400 jockey 6 2701 7.5 1.0 4.2 1.2 2722 chr3L 6001678 intron PVRAP + chr3L 6003039 intron PVRAP + chr3L 6004400 intron PVRAP + chr3L_6_6000001 chr3L_6000001 D8 1038 chr3L 6220921 6220946 chr3L 6230074 6230099 roo 7 9153 1.5 2.5 2.0 2.3 9178 chr3L 6220921 5` UTR pncr008:3L + chr3L 6225510 intergenic not near genes chr3L 6230099 intergenic not near genes chr3L_7_6225001 chr3L_6225001 D8 1039 chr3L 6335011 6335039 chr3L 6335483 6335511 297 12 472 3.5 3.0 3.2 2.9 500 chr3L 6335011 intron CG13300 - chr3L 6335261 intron CG13300 - chr3L 6335511 intron CG13300 - chr3L_12_6335001 chr3L_6335001 D8 1049 chr3L 6855940 6855953 chr3L 6860725 6860731 Doc 4 4783 4.0 6.5 5.2 0.6 4791 chr3L 6855940 intergenic not near genes chr3L 6858336 intergenic not near genes chr3L 6860731 intergenic not near genes chr3L_4_6855001 chr3L_6855001 D8 1054 chr3L 6994884 6994917 chr3L 6995496 6995529 BS 10 612 0.5 1.0 0.8 5.6 645 chr3L 6994884 intergenic bin + chr3L 6995206 intergenic not near genes chr3L 6995529 intergenic not near genes chr3L_10_6995001 chr3L_6995001 D8 1062 chr3L 7377315 7377343 chr3L 7380421 7380449 297 13 3106 3.0 6.5 4.8 2.2 3134 chr3L 7377315 intron SMSr - chr3L 7378882 intron SMSr - chr3L 7380449 intron SMSr - chr3L_13_7375001 chr3L_7375001 D8 1065 chr3L 7498759 7498777 chr3L 7503537 7503555 F-element 8 4778 2.5 6.0 4.2 1.5 4796 chr3L 7498759 5` UTR CG8539 - chr3L 7501157 intergenic not near genes chr3L 7503555 intergenic not near genes chr3L_8_7500001 chr3L_7500001 D8 1074 chr3L 7793710 7793731 chr3L 7800763 7800784 297 6 7053 5.5 3.0 4.2 1.2 7074 chr3L 7793710 intron CG32369 - chr3L 7797247 intron CG32369 - chr3L 7800784 intron CG32369 - chr3L_6_7795001 chr3L_7795001 D8 1077 chr3L 7886538 7886547 chr3L 7889057 7889066 Stalker4 4 2519 0.0 5.5 2.8 1.1 2528 chr3L 7886538 intron CG32365 + chr3L 7887802 intron CG32365 + chr3L 7889066 intron CG32365 + chr3L_4_7885001 chr3L_7885001 D8 1078 chr3L 7916830 7916861 chr3L 7926002 7926033 roo 4 9172 1.0 3.0 2.0 1.3 9203 chr3L 7916830 3` UTR syd - chr3L 7921432 intron syd - chr3L 7926033 3` UTR syd - chr3L_4_7920001 chr3L_7920001 D8 1079 chr3L 7985372 7985397 chr3L 7987701 7987726 NOF 11 2329 4.0 5.0 4.5 2.0 2354 chr3L 7985372 intron nmo + chr3L 7986549 intron nmo + chr3L 7987726 intron nmo + chr3L_11_7985001 chr3L_7985001 D8 1081 chr3L 8481776 8481803 chr3L 8490936 8490963 roo 7 9159 4.0 7.5 5.8 1.0 9187 chr3L 8481776 intron CG43163 - chr3L 8486370 intron CG43163 - chr3L 8490963 intron CG43163 - chr3L_7_8485001 chr3L_8485001 D8 1085 chr3L 8791273 8791290 chr3L 8796694 8796711 I-element 7 5421 6.5 0.0 3.2 1.7 5438 chr3L 8791273 exon Fhos + chr3L 8793992 intron Fhos + chr3L 8796711 intron Fhos + chr3L_7_8790001 chr3L_8790001 D8 1094 chr3L 9076928 9076949 chr3L 9084489 9084510 412 7 7561 7.5 4.5 6.0 1.0 7582 chr3L 9076928 exon Tequila + chr3L 9080719 intron Tequila + chr3L 9084510 exon Tequila + chr3L_7_9080001 chr3L_9080001 D8 1097 chr3L 9130557 9130577 chr3L 9134319 9134338 412 7 3762 7.5 4.5 6.0 1.0 3781 chr3L 9130557 intergenic bol - chr3L 9132448 intergenic not near genes chr3L 9134338 intergenic Dhpr + chr3L_7_9130001 chr3L_9130001 D8 1098 chr3L 9164698 9164727 chr3L 9166166 9166195 hobo 4 1468 2.5 1.0 1.8 1.4 1497 chr3L 9164698 intron Rdl - chr3L 9165446 intron Rdl - chr3L 9166195 intron Rdl - chr3L_4_9165001 chr3L_9165001 D8 1099 chr3L 9219239 9219274 chr3L 9219912 9219947 jockey 18 669 3.0 8.5 5.8 2.6 708 chr3L 9219239 intergenic not near genes chr3L 9219593 intergenic not near genes chr3L 9219947 intergenic not near genes chr3L_18_9215001 chr3L_9215001 D8 1100 chr3L 9270641 9270650 chr3L 9278395 9278406 roo 5 7756 2.5 7.0 4.8 0.9 7765 chr3L 9270641 intron GluRIB + chr3L 9274524 intron GluRIB + chr3L 9278406 exon GluRIB + chr3L_5_9270001 chr3L_9270001 D8 1103 chr3L 9443514 9443535 chr3L 9445306 9445327 S-element 6 1792 2.5 0.0 1.2 2.7 1813 chr3L 9443514 intron CG33926 + chr3L 9444420 intron CG33926 + chr3L 9445327 intron CG33926 + chr3L_6_9440001 chr3L_9440001 D8 1104 chr3L 9533755 9533781 chr3L 9541316 9541342 412 8 7558 3.5 11.0 7.2 1.0 7587 chr3L 9533755 intergenic not near genes chr3L 9537548 intergenic not near genes chr3L 9541342 intergenic not near genes chr3L_8_9535001 chr3L_9535001 D8 1105 chr3L 9571903 9571937 chr3L 9572252 9572286 jockey 6 349 1.0 3.0 2.0 2.0 383 chr3L 9571903 intron CG42673 + chr3L 9572094 intron CG42673 + chr3L 9572286 intron CG42673 + chr3L_6_9570001 chr3L_9570001 D8 1106 chr3L 9575910 9575935 chr3L 9580989 9581014 jockey 11 5079 4.0 5.0 4.5 2.0 5104 chr3L 9575910 intron CG42673 + chr3L 9578462 intron CG42673 + chr3L 9581014 intron CG42673 + chr3L_11_9575001 chr3L_9575001 D8 1116 chr3L 9929671 9929698 chr3L 9938453 9938480 roo 7 8782 1.5 1.0 1.2 3.2 8809 chr3L 9929671 intron CG34356 + chr3L 9934076 intron CG34356 + chr3L 9938480 intron CG34356 + chr3L_7_9930001 chr3L_9930001 D8 1125 chr3L 10414940 10414977 chr3L 10417313 10417350 Doc 11 2373 3.0 2.5 2.8 2.9 2410 chr3L 10414940 intergenic CG12362 + chr3L 10416145 intergenic not near genes chr3L 10417350 intergenic not near genes chr3L_11_10415001 chr3L_10415001 D8 1138 chr3L 11105290 11105326 chr3L 11107002 11107037 X-element 7 1712 7.0 6.5 6.8 0.9 1747 chr3L 11105290 intergenic not near genes chr3L 11106164 intergenic not near genes chr3L 11107037 exon CG32073 - chr3L_7_11105001 chr3L_11105001 D8 1141 chr3L 11264461 11264494 chr3L 11271414 11271447 17.6 9 6953 3.5 2.5 3.0 2.2 6986 chr3L 11264461 intergenic not near genes chr3L 11267954 intergenic not near genes chr3L 11271447 intergenic not near genes chr3L_9_11265001 chr3L_11265001 D8 1143 chr3L 11329691 11329717 chr3L 11332897 11332923 jockey 8 3206 4.0 3.5 3.8 1.7 3232 chr3L 11329691 intergenic not near genes chr3L 11331307 intergenic not near genes chr3L 11332923 intergenic not near genes chr3L_8_11330001 chr3L_11330001 D8 1145 chr3L 11564798 11564805 chr3L 11572420 11572431 412 6 7625 6.5 8.5 7.5 0.7 7633 chr3L 11564798 exon CG33267 + chr3L 11568614 intron CG33267 + chr3L 11572431 exon CG33267 + chr3L_6_11565001 chr3L_11565001 D8 1149 chr3L 11723082 11723116 chr3L 11727878 11727912 Doc 12 4796 1.5 2.5 2.0 4.0 4830 chr3L 11723082 3` UTR Bmcp + chr3L 11725497 intron Bmcp + chr3L 11727912 3` UTR Bmcp + chr3L_12_11725001 chr3L_11725001 D8 1181 chr3L 12874941 12874962 chr3L 12877234 12877255 jockey 9 2293 1.5 3.0 2.2 2.8 2314 chr3L 12874941 intergenic not near genes chr3L 12876098 intergenic not near genes chr3L 12877255 intergenic not near genes chr3L_9_12875001 chr3L_12875001 D8 1183 chr3L 12919287 12919304 chr3L 12924749 12924778 Rt1c 8 5472 7.5 6.0 6.8 1.0 5491 chr3L 12919287 intergenic not near genes chr3L 12922032 intergenic not near genes chr3L 12924778 intergenic not near genes chr3L_8_12920001 chr3L_12920001 D8 1184 chr3L 12957791 12957819 chr3L 12962274 12962302 copia 8 4483 2.0 5.5 3.8 1.7 4511 chr3L 12957791 intergenic not near genes chr3L 12960046 intergenic not near genes chr3L 12962302 intergenic not near genes chr3L_8_12960001 chr3L_12960001 D8 1202 chr3L 13525155 13525190 chr3L 13532952 13532987 roo 13 7797 3.0 5.0 4.0 2.6 7832 chr3L 13525155 intergenic not near genes chr3L 13529071 intergenic not near genes chr3L 13532987 intergenic not near genes chr3L_13_13525001 chr3L_13525001 D8 1207 chr3L 13804542 13804577 chr3L 13822829 13822864 roo 9 18287 1.5 3.5 2.5 2.6 18322 chr3L 13804542 intergenic not near genes chr3L 13813703 intergenic not near genes chr3L 13822864 intergenic not near genes chr3L_9_13810001 chr3L_13810001 D8 1215 chr3L 14245569 14245594 chr3L 14245663 14245689 1360 11 95 7.0 2.0 4.5 2.0 120 chr3L 14245569 3` UTR CR44561 - chr3L 14245629 3` UTR CR44561 - chr3L 14245689 3` UTR CR44561 - chr3L_11_14245001 chr3L_14245001 D8 1218 chr3L 14295979 14296016 chr3L 14296466 14296503 roo 21 487 3.0 7.0 5.0 3.5 524 chr3L 14295979 intron fz + chr3L 14296241 intron fz + chr3L 14296503 intron fz + chr3L_21_14295001 chr3L_14295001 D8 1219 chr3L 14312018 14312056 chr3L 14316833 14316871 X-element 9 4811 2.0 2.5 2.2 2.8 4853 chr3L 14312018 exon fz + chr3L 14314444 intron fz + chr3L 14316871 intron fz + chr3L_9_14310001 chr3L_14310001 D8 1221 chr3L 14468445 14468473 chr3L 14473652 14473680 copia 9 5207 1.5 1.5 1.5 3.6 5235 chr3L 14468445 intron bbg - chr3L 14471062 intron bbg - chr3L 14473680 intron bbg - chr3L_9_14470001 chr3L_14470001 D8 1226 chr3L 14721180 14721207 chr3L 14723024 14723051 Rt1c 10 1844 4.0 6.0 5.0 1.7 1871 chr3L 14721180 intron ome + chr3L 14722116 intron ome + chr3L 14723051 intron ome + chr3L_10_14720001 chr3L_14720001 D8 1234 chr3L 15085048 15085078 chr3L 15086215 15086245 1360 6 1167 1.5 2.5 2.0 2.0 1197 chr3L 15085048 intron cp309 - chr3L 15085646 intron cp309 - chr3L 15086245 intron cp309 - chr3L_6_15085001 chr3L_15085001 D8 1237 chr3L 15295767 15295794 chr3L 15298611 15298638 gypsy5 8 2844 4.0 2.5 3.2 1.9 2871 chr3L 15295767 intergenic not near genes chr3L 15297202 intergenic not near genes chr3L 15298638 intergenic Best4 + chr3L_8_15295001 chr3L_15295001 D8 1239 chr3L 15423760 15423782 chr3L 15426605 15426627 opus 5 2845 2.0 3.5 2.8 1.3 2867 chr3L 15423760 intergenic not near genes chr3L 15425194 intergenic not near genes chr3L 15426627 intergenic not near genes chr3L_5_15425001 chr3L_15425001 D8 1244 chr3L 15554918 15554950 chr3L 15556706 15556738 S-element 9 1788 2.5 2.5 2.5 2.6 1820 chr3L 15554918 intron AGO2 + chr3L 15555828 intron AGO2 + chr3L 15556738 intron AGO2 + chr3L_9_15555001 chr3L_15555001 D8 1254 chr3L 15899221 15899227 chr3L 15899789 15899795 jockey 4 568 7.5 4.5 6.0 0.6 574 chr3L 15899221 intergenic pHCl - chr3L 15899508 intergenic pHCl - chr3L 15899795 intergenic sff - chr3L_4_15895001 chr3L_15895001 D8 1255 chr3L 15899228 15899258 chr3L 15899787 15899817 jockey 13 564 4.0 4.0 4.0 2.6 589 chr3L 15899228 intergenic pHCl - chr3L 15899522 intergenic pHCl - chr3L 15899817 intergenic sff - chr3L_13_15895001 chr3L_15895001 D8 1261 chr3L 16184102 16184138 chr3L 16188922 16188958 X-element 14 4820 1.5 2.5 2.0 4.7 4856 chr3L 16184102 intergenic not near genes chr3L 16186530 intergenic not near genes chr3L 16188958 intergenic not near genes chr3L_14_16185001 chr3L_16185001 D8 1267 chr3L 16443849 16443877 chr3L 16446190 16446218 Doc 9 2341 1.5 2.0 1.8 3.2 2369 chr3L 16443849 intron,intron CG33158 +,dsx-c73A - chr3L 16445034 intron,intron CG33158 +,dsx-c73A - chr3L 16446218 intron,intron CG33158 +,dsx-c73A - chr3L_9_16445001 chr3L_16445001 D8 1268 chr3L 16493977 16494012 chr3L 16494495 16494530 jockey 15 518 5.5 4.0 4.8 2.6 553 chr3L 16493977 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494254 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494530 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_15_16490001 chr3L_16490001 D8 1281 chr3L 16945728 16945759 chr3L 16954882 16954913 roo 10 9154 3.0 5.5 4.2 1.9 9185 chr3L 16945728 exon Obp73a + chr3L 16950320 intergenic not near genes chr3L 16954913 5` UTR Nc73EF + chr3L_10_16950001 chr3L_16950001 D8 1282 chr3L 17034939 17034958 chr3L 17035128 17035147 G2 4 189 1.0 1.0 1.0 2.0 208 chr3L 17034939 intergenic not near genes chr3L 17035043 intergenic not near genes chr3L 17035147 intergenic not near genes chr3L_4_17035001 chr3L_17035001 D8 1284 chr3L 17085004 17085036 chr3L 17094154 17094186 roo 9 9150 4.5 4.5 4.5 1.6 9182 chr3L 17085004 intron Rbp6 - chr3L 17089595 intron Rbp6 - chr3L 17094186 intron Rbp6 - chr3L_9_17085001 chr3L_17085001 D8 1296 chr3L 17516978 17517011 chr3L 17524537 17524570 412 11 7558 2.0 5.0 3.5 2.4 7592 chr3L 17516978 intron CG7564 + chr3L 17520774 intron CG7564 + chr3L 17524570 3` UTR CG7564 + chr3L_11_17520001 chr3L_17520001 D8 1300 chr3L 17730852 17730880 chr3L 17738183 17738211 mdg1 8 7331 1.5 3.5 2.5 2.3 7359 chr3L 17730852 intron Ccn + chr3L 17734532 intron Ccn + chr3L 17738211 intron Ccn + chr3L_8_17730001 chr3L_17730001 D8 1302 chr3L 17799808 17799841 chr3L 17801596 17801629 S-element 8 1788 3.5 1.5 2.5 2.3 1821 chr3L 17799808 intron NUCB1 - chr3L 17800718 intron NUCB1 - chr3L 17801629 intron NUCB1 - chr3L_8_17800001 chr3L_17800001 D8 1304 chr3L 17918377 17918398 chr3L 17921181 17921202 opus 7 2804 3.0 3.0 3.0 1.8 2825 chr3L 17918377 intergenic not near genes chr3L 17919790 intergenic not near genes chr3L 17921202 intergenic not near genes chr3L_7_17915001 chr3L_17915001 D8 1306 chr3L 18047706 18047738 chr3L 18056764 18056796 roo 5 9058 3.0 2.0 2.5 1.4 9090 chr3L 18047706 intron Eip75B - chr3L 18052251 intron Eip75B - chr3L 18056796 intron Eip75B - chr3L_5_18050001 chr3L_18050001 D8 1325 chr3L 18506138 18506152 chr3L 18509595 18509615 F-element 5 3462 2.5 4.0 3.2 1.2 3477 chr3L 18506138 intergenic not near genes chr3L 18507876 intergenic not near genes chr3L 18509615 intergenic not near genes chr3L_5_18505001 chr3L_18505001 D8 1326 chr3L 18528626 18528649 chr3L 18537788 18537811 roo 7 9162 1.0 3.0 2.0 2.3 9185 chr3L 18528626 intergenic not near genes chr3L 18533218 intergenic not near genes chr3L 18537811 intergenic not near genes chr3L_7_18530001 chr3L_18530001 D8 1336 chr3L 18772409 18772442 chr3L 18781091 18781124 roo 11 8682 2.5 4.0 3.2 2.6 8715 chr3L 18772409 intron ftz-f1 - chr3L 18776766 intron ftz-f1 - chr3L 18781124 intron ftz-f1 - chr3L_11_18775001 chr3L_18775001 D8 1342 chr3L 19008847 19008872 chr3L 19009186 19009211 jockey 7 339 0.5 2.5 1.5 2.8 364 chr3L 19008847 intron nkd - chr3L 19009029 intron nkd - chr3L 19009211 intron nkd - chr3L_7_19005001 chr3L_19005001 D8 1346 chr3L 19117045 19117070 chr3L 19124493 19124518 mdg1 7 7448 3.5 3.0 3.2 1.7 7473 chr3L 19117045 intron CG14082 - chr3L 19120782 intron CG14082 - chr3L 19124518 intron CG14082 - chr3L_7_19120001 chr3L_19120001 D8 1349 chr3L 19208062 19208091 chr3L 19209437 19209466 Doc 8 1375 2.0 3.0 2.5 2.3 1404 chr3L 19208062 intron fz2 - chr3L 19208764 intron fz2 - chr3L 19209466 intron fz2 - chr3L_8_19205001 chr3L_19205001 D8 1365 chr3L 19820297 19820318 chr3L 19827847 19827868 412 7 7550 3.0 1.5 2.2 2.2 7571 chr3L 19820297 intron Deaf1 + chr3L 19824082 intron Deaf1 + chr3L 19827868 intron Deaf1 + chr3L_7_19820001 chr3L_19820001 D8 1367 chr3L 19861822 19861853 chr3L 19863611 19863641 S-element 5 1789 3.0 1.0 2.0 1.7 1819 chr3L 19861822 5` UTR CR45433 + chr3L 19862732 intergenic not near genes chr3L 19863641 intergenic not near genes chr3L_5_19860001 chr3L_19860001 D8 1374 chr3L 20113664 20113689 chr3L 20122921 20122947 roo 6 9258 2.0 4.0 3.0 1.5 9283 chr3L 20113664 intergenic not near genes chr3L 20118306 intergenic not near genes chr3L 20122947 intergenic not near genes chr3L_6_20115001 chr3L_20115001 D8 1379 chr3L 20257336 20257361 chr3L 20258457 20258482 pogo 11 1121 1.0 4.5 2.8 2.9 1146 chr3L 20257336 intron rdgC + chr3L 20257909 intron rdgC + chr3L 20258482 intron rdgC + chr3L_11_20255001 chr3L_20255001 D8 1384 chr3L 20476754 20476775 chr3L 20484354 20484369 springer 7 7599 4.0 6.5 5.2 1.1 7615 chr3L 20476754 3` UTR isoQC + chr3L 20480562 intergenic not near genes chr3L 20484369 3` UTR ZnT77C - chr3L_7_20480001 chr3L_20480001 D8 1385 chr3L 20590061 20590097 chr3L 20590601 20590637 412 6 540 10.5 8.0 9.2 0.6 576 chr3L 20590061 intergenic not near genes chr3L 20590349 intergenic not near genes chr3L 20590637 intergenic not near genes chr3L_6_20590001 chr3L_20590001 D8 1390 chr3L 21014914 21014948 chr3L 21023396 21023430 Tirant 12 8482 0.0 2.5 1.2 5.5 8516 chr3L 21014914 intron skd - chr3L 21019172 intron skd - chr3L 21023430 intron skd - chr3L_12_21015001 chr3L_21015001 D8 1392 chr3L 21151861 21151896 chr3L 21156946 21156981 flea 7 5084 3.0 1.5 2.2 2.2 5120 chr3L 21151861 intron Ac78C - chr3L 21154421 intron Ac78C - chr3L 21156981 intron Ac78C - chr3L_7_21150001 chr3L_21150001 D8 1394 chr3L 21306149 21306155 chr3L 21315309 21315315 roo 4 9160 0.0 1.0 0.5 2.7 9166 chr3L 21306149 3` UTR,3` UTR CG7632 +,Pc - chr3L 21310732 intron Pc - chr3L 21315315 3` UTR Pc - chr3L_4_21310001 chr3L_21310001 D8 1399 chr3L 21498833 21498870 chr3L 21500470 21500507 1360 17 1634 2.5 2.0 2.2 5.3 1674 chr3L 21498833 intron Glg1 - chr3L 21499670 intron Glg1 - chr3L 21500507 intron Glg1 - chr3L_17_21495001 chr3L_21495001 D8 1401 chr3L 21749317 21749333 chr3L 21754478 21754494 Doc 4 5161 2.5 1.5 2.0 1.3 5177 chr3L 21749317 intron Syn1 - chr3L 21751906 intron Syn1 - chr3L 21754494 intron Syn1 - chr3L_4_21750001 chr3L_21750001 D8 1406 chr3L 22099674 22099704 chr3L 22105861 22105891 3S18 4 6187 4.0 2.0 3.0 1.0 6217 chr3L 22099674 intergenic not near genes chr3L 22102782 intergenic not near genes chr3L 22105891 intergenic not near genes chr3L_4_22100001 chr3L_22100001 D8 1411 chr3L 22577617 22577644 chr3L 22582404 22582433 Doc 11 4787 6.5 4.0 5.2 1.8 4816 chr3L 22577617 intergenic not near genes chr3L 22580025 intergenic not near genes chr3L 22582433 3` UTR CG14459 - chr3L_11_22580001 chr3L_22580001 D8 1414 chr3L 22761408 22761418 chr3L 22766843 22766853 Ivk 4 5435 9.0 7.5 8.2 0.4 5445 chr3L 22761408 intron SPoCk + chr3L 22764130 intron SPoCk + chr3L 22766853 intron SPoCk + chr3L_4_22760001 chr3L_22760001 D8 1419 chr3L 22989859 22989894 chr3L 22996834 22996869 297 10 6975 5.0 5.5 5.2 1.6 7010 chr3L 22989859 intergenic not near genes chr3L 22993364 intergenic not near genes chr3L 22996869 intergenic not near genes chr3L_10_22990001 chr3L_22990001 D8 1420 chr3L 23042222 23042256 chr3L 23048976 23049010 gypsy6 6 6754 11.5 10.0 10.8 0.5 6788 chr3L 23042222 intergenic not near genes chr3L 23045616 intergenic not near genes chr3L 23049010 intergenic not near genes chr3L_6_23045001 chr3L_23045001 D8 1421 chr3L 24012411 24012436 chr3L 24020753 24020778 roo 4 8342 6.0 5.5 5.8 0.6 8367 chr3L 24012411 intergenic not near genes chr3L 24016594 intergenic not near genes chr3L 24020778 intergenic not near genes chr3L_4_24015001 chr3L_24015001 D8 1422 chr3L 24168788 24168822 chr3L 24176117 24176151 ZAM 13 7329 3.5 7.5 5.5 2.0 7363 chr3L 24168788 intron Snap25 + chr3L 24172470 intron Snap25 + chr3L 24176151 intron Snap25 + chr3L_13_24170001 chr3L_24170001 D8 1423 chr3L 24791895 24791921 chr3L 24796675 24796701 Doc 4 4780 5.0 3.0 4.0 0.8 4806 chr3L 24791895 intergenic not near genes chr3L 24794298 intergenic not near genes chr3L 24796701 intergenic not near genes chr3L_4_24790001 chr3L_24790001 D8 1425 chr3L 23311674 23311682 chr3L 26026795 26026803 G6 4 2715121 24.0 23.5 23.8 0.2 2715129 chr3L 23311674 intergenic not near genes chr3L 24669238 intergenic not near genes chr3L 26026803 intergenic not near genes chr3L_4_24665001 chr3L_24665001 D8 1427 chr3R 1867168 1867173 chr3R 1954906 1954914 Doc3-element 4 87745 19.0 17.0 18.0 0.2 87746 chr3R 1867168 intron CG42623 + chr3R 1911041 intron CG42623 + chr3R 1954914 intergenic not near genes chr3R_4_1910001 chr3R_1910001 D8 1428 chr3R 1511854 1511860 chr3R 2516773 2516778 297 8 1004918 21.0 26.0 23.5 0.3 1004924 chr3R 1511854 intergenic not near genes chr3R 2014316 intergenic not near genes chr3R 2516778 intergenic not near genes chr3R_8_2010001 chr3R_2010001 D8 1433 chr3R 4366756 4366774 chr3R 4375140 4375158 roo 4 8384 6.5 4.5 5.5 0.6 8402 chr3R 4366756 3` UTR CG1090 + chr3R 4370957 intergenic not near genes chr3R 4375158 5` UTR CR44922 + chr3R_4_4370001 chr3R_4370001 D8 1434 chr3R 4408409 4408440 chr3R 4412714 4412745 Juan 5 4305 8.5 6.0 7.2 0.6 4336 chr3R 4408409 intron CG32944 - chr3R 4410577 intron CG32944 - chr3R 4412745 intron CG32944 - chr3R_5_4410001 chr3R_4410001 D8 1438 chr3R 4683181 4683207 chr3R 4684941 4684967 S-element 6 1760 7.5 11.5 9.5 0.6 1786 chr3R 4683181 intron CG43427 + chr3R 4684074 intron CG43427 + chr3R 4684967 intron CG43427 + chr3R_6_4680001 chr3R_4680001 D8 1440 chr3R 4753241 4753263 chr3R 4757545 4757567 F-element 6 4304 10.0 10.0 10.0 0.5 4326 chr3R 4753241 intron,intron atms +,CG44098 - chr3R 4755404 intron,intron atms +,CG44098 - chr3R 4757567 intron,exon atms +,CG44098 - chr3R_6_4755001 chr3R_4755001 D8 1446 chr3R 5045842 5045878 chr3R 5052945 5052981 HMS-Beagle 19 7103 3.0 3.0 3.0 4.8 7139 chr3R 5045842 intron CR43635 - chr3R 5049412 intergenic not near genes chr3R 5052981 intergenic CR45588 - chr3R_19_5045001 chr3R_5045001 D8 1448 chr3R 5067981 5068011 chr3R 5073499 5073529 mdg3 5 5518 7.5 13.5 10.5 0.4 5548 chr3R 5067981 intergenic not near genes chr3R 5070755 intergenic not near genes chr3R 5073529 intergenic not near genes chr3R_5_5070001 chr3R_5070001 D8 1454 chr3R 5338398 5338426 chr3R 5343576 5343604 Rt1c 12 5178 7.0 20.0 13.5 0.8 5206 chr3R 5338398 intron mtd - chr3R 5341001 intron mtd - chr3R 5343604 intron mtd - chr3R_12_5340001 chr3R_5340001 D8 1462 chr3R 5746012 5746024 chr3R 5746254 5746266 pogo 4 242 5.5 2.0 3.8 0.8 254 chr3R 5746012 3` UTR Madm + chr3R 5746139 3` UTR Madm + chr3R 5746266 3` UTR Madm + chr3R_4_5745001 chr3R_5745001 D8 1463 chr3R 5747008 5747045 chr3R 5753200 5753237 diver 6 6192 2.0 2.0 2.0 2.0 6229 chr3R 5747008 intergenic Madm + chr3R 5750122 intergenic not near genes chr3R 5753237 intergenic CG2091 - chr3R_6_5750001 chr3R_5750001 D8 1466 chr3R 5809111 5809145 chr3R 5809353 5809387 pogo 11 242 3.0 2.5 2.8 2.9 276 chr3R 5809111 3` UTR CG11000 + chr3R 5809249 3` UTR CG11000 + chr3R 5809387 3` UTR CG11000 + chr3R_11_5805001 chr3R_5805001 D8 1467 chr3R 5822381 5822410 chr3R 5823549 5823578 1360 7 1168 3.5 6.5 5.0 1.2 1197 chr3R 5822381 3` UTR CG2023 - chr3R 5822980 3` UTR CG2023 - chr3R 5823578 3` UTR CG2023 - chr3R_7_5820001 chr3R_5820001 D8 1469 chr3R 5927568 5927590 chr3R 5927809 5927831 pogo 10 241 2.5 5.0 3.8 2.1 263 chr3R 5927568 intron CG34113 - chr3R 5927700 intron CG34113 - chr3R 5927831 intron CG34113 - chr3R_10_5925001 chr3R_5925001 D8 1472 chr3R 6015969 6015990 chr3R 6024471 6024492 Tirant 10 8502 3.0 5.0 4.0 2.0 8523 chr3R 6015969 intergenic not near genes chr3R 6020230 intergenic not near genes chr3R 6024492 intergenic not near genes chr3R_10_6020001 chr3R_6020001 D8 1477 chr3R 6158510 6158536 chr3R 6167094 6167120 Tirant 6 8584 5.5 3.5 4.5 1.1 8610 chr3R 6158510 intergenic not near genes chr3R 6162815 intergenic not near genes chr3R 6167120 intergenic CG1077 + chr3R_6_6160001 chr3R_6160001 D8 1478 chr3R 6175181 6175207 chr3R 6182454 6182471 HMS-Beagle2 8 7272 4.0 4.5 4.2 1.5 7290 chr3R 6175181 intergenic Osi1 + chr3R 6178826 intron CR45194 + chr3R 6182471 intergenic CR45194 + chr3R_8_6175001 chr3R_6175001 D8 1479 chr3R 6206289 6206319 chr3R 6206496 6206537 BS 10 216 8.5 4.5 6.5 1.3 248 chr3R 6206289 exon Osi24 + chr3R 6206413 intron Osi24 + chr3R 6206537 intron Osi24 + chr3R_10_6205001 chr3R_6205001 D8 1482 chr3R 6510040 6510055 chr3R 6515122 6515137 jockey 4 5082 1.0 2.5 1.8 1.4 5097 chr3R 6510040 intergenic not near genes chr3R 6512588 intergenic not near genes chr3R 6515137 intergenic not near genes chr3R_4_6510001 chr3R_6510001 D8 1490 chr3R 6737496 6737529 chr3R 6739284 6739317 Doc 10 1788 5.0 2.5 3.8 2.1 1821 chr3R 6737496 intron pb - chr3R 6738406 intron pb - chr3R 6739317 intron pb - chr3R_10_6735001 chr3R_6735001 D8 1506 chr3R 7729471 7729497 chr3R 7737403 7737436 Stalker2 9 7938 4.5 6.5 5.5 1.4 7965 chr3R 7729471 intergenic not near genes chr3R 7733454 intergenic not near genes chr3R 7737436 intergenic not near genes chr3R_9_7730001 chr3R_7730001 D8 1507 chr3R 7973322 7973342 chr3R 7974385 7974405 1360 7 1063 2.0 3.5 2.8 1.8 1083 chr3R 7973322 intergenic not near genes chr3R 7973864 intergenic not near genes chr3R 7974405 intergenic CD98hc - chr3R_7_7970001 chr3R_7970001 D8 1511 chr3R 8094407 8094436 chr3R 8099713 8099742 Transpac 9 5305 4.5 2.0 3.2 2.1 5335 chr3R 8094407 intron CG7900 + chr3R 8097074 intron CG7900 + chr3R 8099742 intron CG7900 + chr3R_9_8095001 chr3R_8095001 D8 1512 chr3R 8101768 8101793 chr3R 8104853 8104878 G2 5 3085 3.0 4.5 3.8 1.0 3110 chr3R 8101768 exon CG7900 + chr3R 8103323 intron CG7900 + chr3R 8104878 3` UTR CG7900 + chr3R_5_8100001 chr3R_8100001 D8 1514 chr3R 8207552 8207588 chr3R 8208398 8208434 F-element 11 845 2.0 3.5 2.8 2.9 882 chr3R 8207552 intergenic not near genes chr3R 8207993 intergenic not near genes chr3R 8208434 intergenic not near genes chr3R_11_8205001 chr3R_8205001 D8 1522 chr3R 8403008 8403040 chr3R 8412174 8412207 roo 15 9167 4.5 3.5 4.0 3.0 9199 chr3R 8403008 intron CG45263 - chr3R 8407608 intron CG45263 - chr3R 8412207 intron CG45263 - chr3R_15_8405001 chr3R_8405001 D8 1524 chr3R 8570481 8570495 chr3R 8575112 8575132 HMS-Beagle 7 4635 2.5 1.5 2.0 2.3 4651 chr3R 8570481 intergenic not near genes chr3R 8572806 intergenic not near genes chr3R 8575132 intergenic not near genes chr3R_7_8570001 chr3R_8570001 D8 1525 chr3R 8601765 8601799 chr3R 8610919 8610953 roo 8 9154 2.5 4.5 3.5 1.8 9188 chr3R 8601765 intron 5-HT2B + chr3R 8606359 intron 5-HT2B + chr3R 8610953 intron 5-HT2B + chr3R_8_8605001 chr3R_8605001 D8 1528 chr3R 8707353 8707383 chr3R 8709795 8709825 jockey 13 2442 4.0 4.0 4.0 2.6 2472 chr3R 8707353 intergenic not near genes chr3R 8708589 intergenic not near genes chr3R 8709825 intergenic not near genes chr3R_13_8705001 chr3R_8705001 D8 1538 chr3R 9278781 9278812 chr3R 9284042 9284073 Rt1a 16 5261 3.0 4.5 3.8 3.3 5292 chr3R 9278781 intergenic not near genes chr3R 9281427 intergenic not near genes chr3R 9284073 intergenic not near genes chr3R_16_9280001 chr3R_9280001 D8 1539 chr3R 9319572 9319605 chr3R 9320008 9320041 jockey 11 436 5.5 2.0 3.8 2.3 469 chr3R 9319572 intron CG8861 - chr3R 9319806 intron CG8861 - chr3R 9320041 intron CG8861 - chr3R_11_9315001 chr3R_9315001 D8 1540 chr3R 9361821 9361845 chr3R 9362063 9362087 pogo 6 242 0.5 2.5 1.5 2.4 266 chr3R 9361821 3` UTR CG45050 + chr3R 9361954 3` UTR CG45050 + chr3R 9362087 3` UTR CG45050 + chr3R_6_9360001 chr3R_9360001 D8 1545 chr3R 9699973 9700004 chr3R 9700063 9700094 1360 8 90 11.0 11.0 11.0 0.7 121 chr3R 9699973 intron Unc-115a - chr3R 9700034 intron Unc-115a - chr3R 9700094 intron Unc-115a - chr3R_8_9700001 chr3R_9700001 D8 1551 chr3R 10231790 10231813 chr3R 10237368 10237391 mdg3 7 5578 4.0 3.0 3.5 1.6 5601 chr3R 10231790 intron CG42795 + chr3R 10234590 intron CG42795 + chr3R 10237391 intron CG42795 + chr3R_7_10230001 chr3R_10230001 D8 1567 chr3R 11379234 11379269 chr3R 11388390 11388425 roo 11 9156 1.0 5.0 3.0 2.8 9191 chr3R 11379234 intron pros + chr3R 11383830 intron pros + chr3R 11388425 intron pros + chr3R_11_11380001 chr3R_11380001 D8 1573 chr3R 11841060 11841097 chr3R 11846252 11846289 BS 15 5192 6.5 5.0 5.8 2.2 5229 chr3R 11841060 intron CG6959 - chr3R 11843674 intron CG6959 - chr3R 11846289 intron CG6959 - chr3R_15_11840001 chr3R_11840001 D8 1576 chr3R 12022889 12022914 chr3R 12025067 12025092 pogo 7 2178 2.5 5.5 4.0 1.4 2203 chr3R 12022889 intergenic not near genes chr3R 12023990 intergenic not near genes chr3R 12025092 intergenic not near genes chr3R_7_12020001 chr3R_12020001 D8 1600 chr3R 12920149 12920185 chr3R 12925353 12925389 copia 15 5203 2.0 3.5 2.8 3.9 5240 chr3R 12920149 intron beat-Vb + chr3R 12922769 intron beat-Vb + chr3R 12925389 intron beat-Vb + chr3R_15_12920001 chr3R_12920001 D8 1605 chr3R 13135829 13135852 chr3R 13138005 13138028 pogo 5 2176 5.5 5.0 5.2 0.8 2199 chr3R 13135829 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13136928 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138028 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_5_13135001 chr3R_13135001 D8 1606 chr3R 13143038 13143063 chr3R 13148615 13148640 mdg3 17 5576 4.0 8.0 6.0 2.4 5602 chr3R 13143038 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145839 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148640 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_17_13145001 chr3R_13145001 D8 1611 chr3R 13314104 13314129 chr3R 13318893 13318918 Doc 8 4789 2.0 4.5 3.2 1.9 4814 chr3R 13314104 intergenic not near genes chr3R 13316511 intergenic not near genes chr3R 13318918 intergenic CG45080 - chr3R_8_13315001 chr3R_13315001 D8 1625 chr3R 14021646 14021678 chr3R 14023464 14023496 S-element 9 1818 3.5 3.5 3.5 2.0 1850 chr3R 14021646 intron rdx - chr3R 14022571 intron rdx - chr3R 14023496 intron rdx - chr3R_9_14020001 chr3R_14020001 D8 1627 chr3R 14180811 14180837 chr3R 14185577 14185603 F-element 8 4766 4.0 2.5 3.2 1.9 4792 chr3R 14180811 intron Dop1R1 - chr3R 14183207 intron Dop1R1 - chr3R 14185603 intron Dop1R1 - chr3R_8_14180001 chr3R_14180001 D8 1628 chr3R 14194430 14194456 chr3R 14203580 14203606 roo 10 9150 3.5 6.5 5.0 1.7 9176 chr3R 14194430 intron Dop1R1 - chr3R 14199018 intron Dop1R1 - chr3R 14203606 intron Dop1R1 - chr3R_10_14195001 chr3R_14195001 D8 1629 chr3R 14246399 14246414 chr3R 14247884 14247911 jockey 8 1494 6.5 2.5 4.5 1.5 1512 chr3R 14246399 intergenic not near genes chr3R 14247155 intergenic not near genes chr3R 14247911 intergenic not near genes chr3R_8_14245001 chr3R_14245001 D8 1640 chr3R 15059271 15059476 chr3R 15059466 15059564 BS 4 115 0.0 0.0 0.0 4.0 293 chr3R 15059271 intron dpr9 - chr3R 15059418 intron dpr9 - chr3R 15059564 intron dpr9 - chr3R_4_15055001 chr3R_15055001 D8 1642 chr3R 15079812 15079836 chr3R 15080054 15080078 pogo 9 242 3.0 3.0 3.0 2.2 266 chr3R 15079812 3` UTR CG6966 - chr3R 15079945 3` UTR CG6966 - chr3R 15080078 3` UTR CG6966 - chr3R_9_15075001 chr3R_15075001 D8 1645 chr3R 15102494 15102531 chr3R 15109751 15109787 412 6 7257 0.5 2.5 1.5 2.4 7293 chr3R 15102494 intron CG42788 - chr3R 15106140 intron CG42788 - chr3R 15109787 intron CG42788 - chr3R_6_15105001 chr3R_15105001 D8 1646 chr3R 15132061 15132081 chr3R 15135122 15135142 Juan 14 3061 8.0 12.5 10.2 1.2 3081 chr3R 15132061 intergenic CG42788 - chr3R 15133602 intergenic not near genes chr3R 15135142 3` UTR CG6912 - chr3R_14_15130001 chr3R_15130001 D8 1649 chr3R 15162539 15162557 chr3R 15167308 15167326 F-element 11 4769 5.0 0.0 2.5 3.1 4787 chr3R 15162539 intron Gyc88E + chr3R 15164932 intron Gyc88E + chr3R 15167326 intron Gyc88E + chr3R_11_15160001 chr3R_15160001 D8 1654 chr3R 15601163 15601194 chr3R 15608686 15608717 412 13 7523 5.0 4.5 4.8 2.2 7554 chr3R 15601163 intergenic not near genes chr3R 15604940 intergenic not near genes chr3R 15608717 intergenic not near genes chr3R_13_15600001 chr3R_15600001 D8 1655 chr3R 15618748 15618762 chr3R 15626223 15626237 blood 6 7474 1.5 2.5 2.0 2.0 7489 chr3R 15618748 intergenic not near genes chr3R 15622492 intergenic not near genes chr3R 15626237 intergenic not near genes chr3R_6_15620001 chr3R_15620001 D8 1661 chr3R 16756316 16756343 chr3R 16762508 16762534 diver 8 6192 5.0 1.5 3.2 1.9 6218 chr3R 16756316 intron bxd - chr3R 16759425 intron bxd - chr3R 16762534 intron bxd - chr3R_8_16755001 chr3R_16755001 D8 1663 chr3R 17294668 17294698 chr3R 17295097 17295127 BS 13 428 3.5 4.5 4.0 2.6 459 chr3R 17294668 intergenic not near genes chr3R 17294898 intergenic not near genes chr3R 17295127 intergenic not near genes chr3R_13_17290001 chr3R_17290001 D8 1672 chr3R 17591289 17591317 chr3R 17591726 17591754 F-element 7 437 6.5 5.0 5.8 1.0 465 chr3R 17591289 intergenic not near genes chr3R 17591522 intergenic not near genes chr3R 17591754 intergenic not near genes chr3R_7_17590001 chr3R_17590001 D8 1673 chr3R 17638314 17638329 chr3R 17638801 17638816 roo 6 487 0.0 1.0 0.5 4.0 502 chr3R 17638314 intron CG43175 + chr3R 17638565 intron CG43175 + chr3R 17638816 intron,intron CG43175 +,CR45222 + chr3R_6_17635001 chr3R_17635001 D8 1679 chr3R 17925854 17925881 chr3R 17927322 17927348 hobo 14 1468 8.0 4.5 6.2 1.9 1494 chr3R 17925854 intron cpo + chr3R 17926601 intron cpo + chr3R 17927348 intron cpo + chr3R_14_17925001 chr3R_17925001 D8 1681 chr3R 18032783 18032804 chr3R 18040457 18040477 opus 11 7674 0.0 4.5 2.2 3.4 7694 chr3R 18032783 intergenic not near genes chr3R 18036630 intergenic not near genes chr3R 18040477 intergenic not near genes chr3R_11_18035001 chr3R_18035001 D8 1689 chr3R 18606501 18606529 chr3R 18610733 18610762 F-element 5 4233 3.0 2.5 2.8 1.3 4261 chr3R 18606501 intron,intron qin +,CG14304 - chr3R 18608632 intron,intron qin +,CG14304 - chr3R 18610762 intron,intron qin +,CG14304 - chr3R_5_18605001 chr3R_18605001 D8 1697 chr3R 19193004 19193013 chr3R 19197306 19197318 F-element 7 4304 3.0 6.0 4.5 1.3 4314 chr3R 19193004 intron CG31475 + chr3R 19195161 intron CG31475 + chr3R 19197318 intron CG31475 + chr3R_7_19195001 chr3R_19195001 D8 1711 chr3R 20156690 20156721 chr3R 20165860 20165892 roo 7 9171 3.5 1.0 2.2 2.2 9202 chr3R 20156690 intergenic not near genes chr3R 20161291 intergenic not near genes chr3R 20165892 intergenic not near genes chr3R_7_20160001 chr3R_20160001 D8 1712 chr3R 20330996 20331022 chr3R 20331483 20331508 roo 13 487 2.5 3.0 2.8 3.4 512 chr3R 20330996 intergenic Sirt2 + chr3R 20331252 intergenic Sirt2 + chr3R 20331508 intergenic not near genes chr3R_13_20330001 chr3R_20330001 D8 1720 chr3R 20854473 20854519 chr3R 20859269 20859281 Doc 11 4788 0.5 1.0 0.8 6.1 4808 chr3R 20854473 intron Ir93a - chr3R 20856877 intron Ir93a - chr3R 20859281 exon Ir93a - chr3R_11_20855001 chr3R_20855001 D8 1725 chr3R 21141671 21141698 chr3R 21150153 21150180 Tirant 11 8478 8.0 4.5 6.2 1.5 8509 chr3R 21141671 intron SNF4Agamma + chr3R 21145926 intron SNF4Agamma + chr3R 21150180 intron SNF4Agamma + chr3R_11_21145001 chr3R_21145001 D8 1738 chr3R 21761118 21761154 chr3R 21768511 21768547 mdg1 14 7393 4.5 7.0 5.8 2.1 7429 chr3R 21761118 exon CG42335 + chr3R 21764832 intron CG42335 + chr3R 21768547 exon CG42335 + chr3R_14_21760001 chr3R_21760001 D8 1755 chr3R 22234689 22234714 chr3R 22236003 22236034 pogo 7 1319 2.0 3.5 2.8 1.8 1345 chr3R 22234689 intron SKIP + chr3R 22235362 intron SKIP + chr3R 22236034 intron SKIP + chr3R_7_22235001 chr3R_22235001 D8 1756 chr3R 22239489 22239498 chr3R 22248550 22248559 roo 4 9061 8.5 0.0 4.2 0.8 9070 chr3R 22239489 intron SKIP + chr3R 22244024 intron SKIP + chr3R 22248559 intron SKIP + chr3R_4_22240001 chr3R_22240001 D8 1761 chr3R 22450540 22450576 chr3R 22453181 22453217 NOF 16 2641 3.5 2.0 2.8 4.2 2677 chr3R 22450540 intron CG34376 + chr3R 22451878 intron CG34376 + chr3R 22453217 intron CG34376 + chr3R_16_22450001 chr3R_22450001 D8 1769 chr3R 22881189 22881217 chr3R 22884896 22884924 Doc 6 3707 4.0 1.0 2.5 1.7 3735 chr3R 22881189 intergenic not near genes chr3R 22883056 intergenic not near genes chr3R 22884924 intergenic not near genes chr3R_6_22880001 chr3R_22880001 D8 1775 chr3R 23558399 23558428 chr3R 23560181 23560210 Bari1 11 1782 1.5 2.0 1.8 3.9 1811 chr3R 23558399 intron beat-IV + chr3R 23559304 intron beat-IV + chr3R 23560210 intron beat-IV + chr3R_11_23555001 chr3R_23555001 D8 1782 chr3R 24072083 24072096 chr3R 24072522 24072535 jockey 12 439 13.0 0.0 6.5 1.6 452 chr3R 24072083 intron 4EHP - chr3R 24072309 intron 4EHP - chr3R 24072535 intron 4EHP - chr3R_12_24070001 chr3R_24070001 D8 1783 chr3R 24076917 24076948 chr3R 24078385 24078416 hobo 14 1467 6.0 4.5 5.2 2.3 1499 chr3R 24076917 intron 4EHP - chr3R 24077666 intron 4EHP - chr3R 24078416 intron 4EHP - chr3R_14_24075001 chr3R_24075001 D8 1787 chr3R 24207216 24207246 chr3R 24212293 24212323 flea 10 5077 9.5 9.0 9.2 1.0 5107 chr3R 24207216 intron twin - chr3R 24209770 intron twin - chr3R 24212323 intron twin - chr3R_10_24205001 chr3R_24205001 D8 1793 chr3R 24730091 24730115 chr3R 24732470 24732494 Doc 10 2379 3.0 1.0 2.0 3.3 2403 chr3R 24730091 intron tok + chr3R 24731292 intron tok + chr3R 24732494 intron tok + chr3R_10_24730001 chr3R_24730001 D8 1798 chr3R 24927128 24927152 chr3R 24931920 24931944 Doc 12 4792 4.5 4.5 4.5 2.2 4816 chr3R 24927128 intergenic Trf4-2 + chr3R 24929536 intergenic not near genes chr3R 24931944 intergenic CG11771 + chr3R_12_24925001 chr3R_24925001 D8 1811 chr3R 25725834 25725859 chr3R 25734994 25735020 roo 6 9161 2.5 3.0 2.8 1.6 9186 chr3R 25725834 intron LpR2 - chr3R 25730427 intron LpR2 - chr3R 25735020 intron LpR2 - chr3R_6_25730001 chr3R_25730001 D8 1813 chr3R 25832706 25832723 chr3R 25841877 25841906 roo 7 9181 8.0 6.0 7.0 0.9 9200 chr3R 25832706 exon alpha4GT2 + chr3R 25837306 intron alpha4GT2 + chr3R 25841906 exon alpha4GT2 + chr3R_7_25835001 chr3R_25835001 D8 1823 chr3R 26376321 26376357 chr3R 26385482 26385518 roo 17 9161 6.0 1.0 3.5 3.8 9197 chr3R 26376321 intergenic not near genes chr3R 26380920 intergenic not near genes chr3R 26385518 intergenic not near genes chr3R_17_26380001 chr3R_26380001 D8 1826 chr3R 26558323 26558361 chr3R 26565637 26565674 Stalker4 6 7313 3.0 4.5 3.8 1.2 7351 chr3R 26558323 intron scrib + chr3R 26561998 intron scrib + chr3R 26565674 intron scrib + chr3R_6_26560001 chr3R_26560001 D8 1829 chr3R 26642738 26642759 chr3R 26643132 26643153 jockey 5 394 1.0 4.0 2.5 1.4 415 chr3R 26642738 intergenic not near genes chr3R 26642946 intergenic not near genes chr3R 26643153 intergenic not near genes chr3R_5_26640001 chr3R_26640001 D8 1833 chr3R 26810555 26810584 chr3R 26811041 26811070 roo 7 486 6.0 5.0 5.5 1.1 515 chr3R 26810555 intron Tl + chr3R 26810812 intron Tl + chr3R 26811070 intron Tl + chr3R_7_26810001 chr3R_26810001 D8 1837 chr3R 27007404 27007435 chr3R 27016540 27016571 roo 11 9136 2.5 3.0 2.8 2.9 9167 chr3R 27007404 intron RYa-R + chr3R 27011988 intron RYa-R + chr3R 27016571 intron RYa-R + chr3R_11_27010001 chr3R_27010001 D8 1841 chr3R 27140512 27140545 chr3R 27148123 27148156 412 13 7609 5.0 2.0 3.5 2.9 7644 chr3R 27140512 intron CG6051 - chr3R 27144334 intron CG6051 - chr3R 27148156 intron CG6051 - chr3R_13_27140001 chr3R_27140001 D8 1843 chr3R 27342790 27342825 chr3R 27351372 27351407 Tirant 13 8582 4.0 2.5 3.2 3.1 8617 chr3R 27342790 intron CG42534 + chr3R 27347098 intron CG42534 + chr3R 27351407 intron CG42534 + chr3R_13_27345001 chr3R_27345001 D8 1848 chr3R 27725565 27725593 chr3R 27731006 27731036 I-element 9 5443 2.0 4.5 3.2 2.1 5471 chr3R 27725565 intergenic not near genes chr3R 27728300 intergenic not near genes chr3R 27731036 intergenic not near genes chr3R_9_27725001 chr3R_27725001 D8 1852 chr3R 27856761 27856790 chr3R 27858245 27858274 hopper2 9 1484 4.5 3.0 3.8 1.9 1513 chr3R 27856761 intron CG34353 - chr3R 27857518 intron CG34353 - chr3R 27858274 intron CG34353 - chr3R_9_27855001 chr3R_27855001 D8 1853 chr3R 27862952 27862984 chr3R 27868258 27868290 Transpac 10 5304 4.5 3.5 4.0 2.0 5338 chr3R 27862952 intron CG34353 - chr3R 27865621 intron CG34353 - chr3R 27868290 intron CG34353 - chr3R_10_27865001 chr3R_27865001 D8 1854 chr3R 27875705 27875732 chr3R 27882761 27882788 297 4 7056 1.5 5.0 3.2 1.0 7083 chr3R 27875705 intron CG34353 - chr3R 27879246 intron CG34353 - chr3R 27882788 intron CG34353 - chr3R_4_27875001 chr3R_27875001 D8 1856 chr3R 28068487 28068527 chr3R 28073930 28073970 I-element 13 5443 1.5 1.0 1.2 5.9 5483 chr3R 28068487 intron CG34362 + chr3R 28071228 intron CG34362 + chr3R 28073970 intron CG34362 + chr3R_13_28070001 chr3R_28070001 D8 1858 chr3R 28173667 28173702 chr3R 28181098 28181133 mdg1 10 7431 3.0 3.5 3.2 2.4 7466 chr3R 28173667 intron CG34354 + chr3R 28177400 intron CG34354 + chr3R 28181133 intron CG34354 + chr3R_10_28175001 chr3R_28175001 D8 1861 chr3R 28253350 28253370 chr3R 28255855 28255881 jockey 14 2510 5.0 5.5 5.2 2.3 2531 chr3R 28253350 intergenic not near genes chr3R 28254616 intergenic not near genes chr3R 28255881 intergenic not near genes chr3R_14_28250001 chr3R_28250001 D8 1880 chr3R 28758285 28758302 chr3R 28763903 28763919 roo 5 5618 5.0 0.0 2.5 1.4 5634 chr3R 28758285 intergenic aqrs - chr3R 28761102 intergenic not near genes chr3R 28763919 intergenic not near genes chr3R_5_28760001 chr3R_28760001 D8 1881 chr3R 28792866 28792898 chr3R 28797962 28797994 jockey 8 5096 3.5 1.5 2.5 2.3 5128 chr3R 28792866 intergenic not near genes chr3R 28795430 intergenic not near genes chr3R 28797994 intergenic not near genes chr3R_8_28795001 chr3R_28795001 D8 1888 chr3R 29079397 29079409 chr3R 29080770 29080782 NOF 6 1373 0.5 3.5 2.0 2.0 1385 chr3R 29079397 intron CG11873 + chr3R 29080090 intron CG11873 + chr3R 29080782 intron CG11873 + chr3R_6_29080001 chr3R_29080001 D8 1893 chr3R 29319832 29319857 chr3R 29320152 29320177 jockey 4 320 2.0 6.0 4.0 0.8 345 chr3R 29319832 intergenic Cnx99A - chr3R 29320004 intergenic Cnx99A - chr3R 29320177 intergenic not near genes chr3R_4_29320001 chr3R_29320001 D8 1896 chr3R 29406616 29406648 chr3R 29407899 29407909 jockey 15 1284 5.5 2.5 4.0 3.0 1293 chr3R 29406616 intron Ptp99A + chr3R 29407262 intron Ptp99A + chr3R 29407909 intron Ptp99A + chr3R_15_29405001 chr3R_29405001 D8 1906 chr3R 29738262 29738301 chr3R 29739730 29739769 hobo 16 1468 2.5 2.0 2.2 5.0 1507 chr3R 29738262 intergenic CG1969 +,CG7598 + chr3R 29739016 intron CG1969 + chr3R 29739769 5` UTR CG1969 + chr3R_16_29735001 chr3R_29735001 D8 1908 chr3R 29760371 29760391 chr3R 29761571 29761593 pogo 5 1202 2.5 3.5 3.0 1.2 1222 chr3R 29760371 intergenic not near genes chr3R 29760982 intergenic not near genes chr3R 29761593 intergenic not near genes chr3R_5_29760001 chr3R_29760001 D8 1910 chr3R 29882020 29882053 chr3R 29891178 29891211 roo 16 9158 4.0 5.5 4.8 2.8 9191 chr3R 29882020 intron CG31038 + chr3R 29886616 intron CG31038 + chr3R 29891211 intron CG31038 + chr3R_16_29885001 chr3R_29885001 D8 1915 chr3R 30084848 30084882 chr3R 30086315 30086350 hobo 14 1468 3.5 2.5 3.0 3.5 1502 chr3R 30084848 intron sima + chr3R 30085599 intron sima + chr3R 30086350 intron sima + chr3R_14_30085001 chr3R_30085001 D8 1919 chr3R 30238764 30238790 chr3R 30239929 30239956 1360 5 1165 0.0 0.0 0.0 5.0 1192 chr3R 30238764 intergenic not near genes chr3R 30239360 intergenic not near genes chr3R 30239956 intergenic not near genes chr3R_5_30235001 chr3R_30235001 D8 1921 chr3R 30317330 30317350 chr3R 30324923 30324943 roo 5 7593 1.0 0.5 0.8 2.8 7613 chr3R 30317330 intron hdc + chr3R 30321136 intron hdc + chr3R 30324943 intron hdc + chr3R_5_30320001 chr3R_30320001 D8 1923 chr3R 30396216 30396245 chr3R 30404483 30404512 roo 8 8267 2.0 3.0 2.5 2.3 8296 chr3R 30396216 intergenic not near genes chr3R 30400364 intergenic not near genes chr3R 30404512 5` UTR CR45570 + chr3R_8_30400001 chr3R_30400001 D8 1926 chr3R 30480472 30480512 chr3R 30482940 30482981 jockey 12 2468 3.0 6.5 4.8 2.1 2509 chr3R 30480472 intron PH4alphaEFB + chr3R 30481726 intron PH4alphaEFB + chr3R 30482981 intron PH4alphaEFB + chr3R_12_30480001 chr3R_30480001 D8 1931 chr3R 30679530 30679552 chr3R 30687000 30687022 blood 6 7470 3.0 6.5 4.8 1.0 7492 chr3R 30679530 intergenic not near genes chr3R 30683276 intergenic not near genes chr3R 30687022 intergenic not near genes chr3R_6_30680001 chr3R_30680001 D8 1934 chr3R 30818812 30818845 chr3R 30820378 30820411 1360 5 1566 4.5 2.5 3.5 1.1 1599 chr3R 30818812 intron cindr + chr3R 30819612 intron cindr + chr3R 30820411 intron cindr + chr3R_5_30815001 chr3R_30815001 D8 1939 chr3R 31074233 31074247 chr3R 31081832 31081846 springer 7 7599 4.0 0.0 2.0 2.3 7613 chr3R 31074233 intron Sox100B + chr3R 31078040 intron Sox100B + chr3R 31081846 intron Sox100B + chr3R_7_31075001 chr3R_31075001 D8 1946 chr3R 31279372 31279406 chr3R 31285564 31285596 diver 16 6191 6.0 3.0 4.5 2.9 6224 chr3R 31279372 intergenic not near genes chr3R 31282484 intergenic not near genes chr3R 31285596 intergenic not near genes chr3R_16_31280001 chr3R_31280001 D8 1948 chr3R 31413091 31413123 chr3R 31418290 31418324 copia 7 5199 4.0 0.0 2.0 2.3 5233 chr3R 31413091 intron Gprk2 + chr3R 31415708 intron Gprk2 + chr3R 31418324 intron Gprk2 + chr3R_7_31415001 chr3R_31415001 D8 1953 chr3R 31691530 31691556 chr3R 31696297 31696323 Doc 14 4767 2.5 5.5 4.0 2.8 4793 chr3R 31691530 intergenic not near genes chr3R 31693926 intergenic not near genes chr3R 31696323 intergenic not near genes chr3R_14_31690001 chr3R_31690001 D8 1959 chr3R 31997992 31998014 chr3R 32005463 32005485 blood 10 7470 3.5 2.0 2.8 2.6 7493 chr3R 31997992 intron heph - chr3R 32001738 intron heph - chr3R 32005485 intron heph - chr3R_10_32000001 chr3R_32000001 D8 1961 chr4 76492 76513 chr4 81936 81957 I-element 6 5444 3.0 3.5 3.2 1.4 5465 chr4 76492 intron pan + chr4 79224 intron pan + chr4 81957 intron pan + chr4_6_75001 chr4_75001 D8 1962 chr4 671603 671628 chr4 680187 680204 Tirant 8 8581 4.0 5.0 4.5 1.5 8601 chr4 671603 intron CG11360 + chr4 675904 intron CG11360 + chr4 680204 intron CG11360 + chr4_8_675001 chr4_675001 D8 1965 chrX 428416 428450 chrX 434602 434636 3S18 9 6186 5.5 1.5 3.5 2.0 6220 chrX 428416 intron CG32816 - chrX 431526 intron CG32816 - chrX 434636 intron CG32816 - chrX_9_430001 chrX_430001 D8 1966 chrX 827600 827627 chrX 835393 835419 roo 5 7793 3.5 3.0 3.2 1.2 7819 chrX 827600 intron CG43867 - chrX 831510 intron CG43867 - chrX 835419 intron CG43867 - chrX_5_830001 chrX_830001 D8 1967 chrX 906700 906730 chrX 908490 908520 S-element 17 1790 4.5 7.0 5.8 2.5 1820 chrX 906700 intron CG43867 - chrX 907610 intron CG43867 - chrX 908520 intron CG43867 - chrX_17_905001 chrX_905001 D8 1968 chrX 1627977 1627997 chrX 1635446 1635466 gtwin 8 7469 6.0 2.0 4.0 1.6 7489 chrX 1627977 intron,intron Mur2B -,br + chrX 1631722 intron,intron Mur2B -,br + chrX 1635466 intron,intron Mur2B -,br + chrX_8_1630001 chrX_1630001 D8 1969 chrX 2399834 2399871 chrX 2408188 2408208 roo 27 8352 5.5 4.0 4.8 4.7 8374 chrX 2399834 intergenic not near genes chrX 2404021 intergenic not near genes chrX 2408208 intergenic not near genes chrX_27_2400001 chrX_2400001 D8 1971 chrX 2664383 2664418 chrX 2665529 2665565 1360 8 1147 2.0 4.0 3.0 2.0 1182 chrX 2664383 intron sgg + chrX 2664974 intron sgg + chrX 2665565 intron sgg + chrX_8_2660001 chrX_2660001 D8 1972 chrX 2844908 2844922 chrX 2852319 2852333 mdg1 4 7411 1.0 2.0 1.5 1.6 7425 chrX 2844908 intron kirre + chrX 2848620 intron kirre + chrX 2852333 intron kirre + chrX_4_2845001 chrX_2845001 D8 1975 chrX 3058022 3058045 chrX 3058264 3058287 pogo 4 242 3.5 3.0 3.2 1.0 265 chrX 3058022 intron kirre + chrX 3058154 intron kirre + chrX 3058287 intron kirre + chrX_4_3055001 chrX_3055001 D8 1981 chrX 3415026 3415050 chrX 3421212 3421236 3S18 5 6186 1.5 4.5 3.0 1.2 6210 chrX 3415026 intron,intron CR44999 +,CG12535 - chrX 3418131 intron,intron CR44999 +,CG12535 - chrX 3421236 intron,intron CR44999 +,CG12535 - chrX_5_3415001 chrX_3415001 D8 1984 chrX 3493088 3493117 chrX 3502248 3502277 roo 10 9160 8.0 3.0 5.5 1.5 9189 chrX 3493088 intron,intron CR44999 +,Gas8 - chrX 3497682 intron,intron CR44999 +,Gas8 - chrX 3502277 intron,intron CR44999 +,Gas8 - chrX_10_3495001 chrX_3495001 D8 1987 chrX 3597554 3597584 chrX 3619723 3619753 roo 11 22169 4.0 6.0 5.0 1.8 22199 chrX 3597554 intron AstA-R1 + chrX 3608654 intron AstA-R1 + chrX 3619753 intron AstA-R1 + chrX_11_3605001 chrX_3605001 D8 1991 chrX 3726763 3726797 chrX 3730161 3730188 NOF 11 3397 3.0 0.0 1.5 4.4 3425 chrX 3726763 intron tlk + chrX 3728476 intron tlk + chrX 3730188 intron tlk + chrX_11_3725001 chrX_3725001 D8 2000 chrX 3986860 3986893 chrX 3994494 3994527 412 8 7634 2.5 1.5 2.0 2.7 7667 chrX 3986860 intergenic not near genes chrX 3990694 intergenic not near genes chrX 3994527 intergenic not near genes chrX_8_3990001 chrX_3990001 D8 2004 chrX 4157895 4157911 chrX 4164949 4164965 297 6 7054 3.0 3.5 3.2 1.4 7070 chrX 4157895 intron Fas2 - chrX 4161430 intron Fas2 - chrX 4164965 intron Fas2 - chrX_6_4160001 chrX_4160001 D8 2011 chrX 4792380 4792407 chrX 4792814 4792841 jockey 9 434 2.0 4.5 3.2 2.1 461 chrX 4792380 intergenic not near genes chrX 4792610 intergenic not near genes chrX 4792841 intergenic not near genes chrX_9_4790001 chrX_4790001 D8 2012 chrX 4827966 4827999 chrX 4835338 4835371 Stalker4 13 7369 4.5 4.0 4.2 2.5 7405 chrX 4827966 intergenic not near genes chrX 4831668 intergenic not near genes chrX 4835371 intergenic not near genes chrX_13_4830001 chrX_4830001 D8 2017 chrX 4990044 4990076 chrX 4997259 4997291 roo 14 7215 2.0 2.5 2.2 4.4 7247 chrX 4990044 intron CR44833 - chrX 4993668 intron CR44833 - chrX 4997291 intron CR44833 - chrX_14_4990001 chrX_4990001 D8 2019 chrX 5096274 5096302 chrX 5103840 5103868 springer 10 7566 6.0 6.0 6.0 1.4 7594 chrX 5096274 intron,intron CG15465 +,rg + chrX 5100071 intron,intron CG15465 +,rg + chrX 5103868 intron,intron CG15465 +,rg + chrX_10_5100001 chrX_5100001 D8 2021 chrX 5338706 5338732 chrX 5339960 5339986 jockey 9 1254 3.0 6.0 4.5 1.6 1280 chrX 5338706 intergenic not near genes chrX 5339346 intergenic not near genes chrX 5339986 intergenic SK + chrX_9_5335001 chrX_5335001 D8 2024 chrX 5481066 5481090 chrX 5485035 5485059 I-element 7 3969 11.5 6.5 9.0 0.7 3993 chrX 5481066 intron SPR + chrX 5483062 intron SPR + chrX 5485059 intron SPR + chrX_7_5480001 chrX_5480001 D8 2027 chrX 5524848 5524863 chrX 5528712 5528727 412 5 3864 3.0 1.0 2.0 1.7 3879 chrX 5524848 intergenic snoRNA:Psi28S-3342 - chrX 5526788 intergenic not near genes chrX 5528727 intergenic Vsx2 - chrX_5_5525001 chrX_5525001 D8 2028 chrX 6335211 6335243 chrX 6337720 6337754 Tirant 13 2511 0.0 1.5 0.8 7.2 2543 chrX 6335211 intergenic not near genes chrX 6336482 intergenic not near genes chrX 6337754 intergenic CG3842 + chrX_13_6335001 chrX_6335001 D8 2031 chrX 6562817 6562847 chrX 6571300 6571330 Tirant 24 8481 6.0 5.5 5.8 3.5 8513 chrX 6562817 intron CG34417 + chrX 6567074 intron CG34417 + chrX 6571330 intron CG34417 + chrX_24_6565001 chrX_6565001 D8 2037 chrX 7023600 7023634 chrX 7030991 7031025 Tabor 17 7391 6.5 4.0 5.2 2.7 7425 chrX 7023600 intron CG12541 - chrX 7027312 intron CG12541 - chrX 7031025 intron CG12541 - chrX_17_7025001 chrX_7025001 D8 2038 chrX 7125254 7125276 chrX 7134414 7134436 roo 4 9160 4.0 2.0 3.0 1.0 9182 chrX 7125254 intergenic not near genes chrX 7129845 intergenic not near genes chrX 7134436 intergenic not near genes chrX_4_7125001 chrX_7125001 D8 2043 chrX 7784233 7784242 chrX 7784536 7784545 jockey 5 303 5.5 3.0 4.2 1.0 312 chrX 7784233 intergenic not near genes chrX 7784389 intergenic not near genes chrX 7784545 intergenic not near genes chrX_5_7780001 chrX_7780001 D8 2045 chrX 8031427 8031461 chrX 8035737 8035771 Juan 15 4310 7.0 5.5 6.2 2.1 4344 chrX 8031427 intergenic not near genes chrX 8033599 intergenic not near genes chrX 8035771 3` UTR CG2233 - chrX_15_8030001 chrX_8030001 D8 2046 chrX 8364844 8364878 chrX 8365242 8365293 BS 9 402 2.0 0.0 1.0 4.5 449 chrX 8364844 intron nAChRalpha3 - chrX 8365068 intron nAChRalpha3 - chrX 8365293 intron nAChRalpha3 - chrX_9_8365001 chrX_8365001 D8 2050 chrX 8922324 8922362 chrX 8922759 8922797 jockey 11 435 5.0 4.0 4.5 2.0 473 chrX 8922324 intron rdgA + chrX 8922560 intron rdgA + chrX 8922797 intron rdgA + chrX_11_8920001 chrX_8920001 D8 2051 chrX 8927586 8927616 chrX 8929857 8929887 NOF 5 2271 2.5 2.5 2.5 1.4 2301 chrX 8927586 intron rdgA + chrX 8928736 intron rdgA + chrX 8929887 intron rdgA + chrX_5_8925001 chrX_8925001 D8 2052 chrX 8948762 8948791 chrX 8956273 8956302 roo 6 7511 1.0 2.5 1.8 2.1 7540 chrX 8948762 intron rdgA + chrX 8952532 intron rdgA + chrX 8956302 intron rdgA + chrX_6_8950001 chrX_8950001 D8 2059 chrX 9508134 9508164 chrX 9509653 9509683 jockey 10 1519 4.0 0.5 2.2 3.1 1549 chrX 9508134 intron CG32700 - chrX 9508908 intron CG32700 - chrX 9509683 intron CG32700 - chrX_10_9505001 chrX_9505001 D8 2062 chrX 9575790 9575822 chrX 9576115 9576147 mdg3 12 325 5.5 6.5 6.0 1.7 357 chrX 9575790 intron,exon CG32699 -,CG42395 - chrX 9575968 intron,intron CG32699 -,CG42395 - chrX 9576147 intron,5` UTR CG32699 -,CG42395 - chrX_12_9575001 chrX_9575001 D8 2070 chrX 10138218 10138248 chrX 10145723 10145753 412 4 7505 3.0 3.0 3.0 1.0 7535 chrX 10138218 intron,intron RhoU +,CR44894 - chrX 10141986 intron,intron RhoU +,CR44894 - chrX 10145753 intron,intron RhoU +,CR44894 - chrX_4_10140001 chrX_10140001 D8 2075 chrX 10348812 10348831 chrX 10356378 10356386 springer 5 7564 1.5 1.0 1.2 2.3 7574 chrX 10348812 intergenic snoRNA:U3:9B + chrX 10352599 intergenic not near genes chrX 10356386 intergenic l(1)G0289 - chrX_5_10350001 chrX_10350001 D8 2077 chrX 10550850 10550889 chrX 10552318 10552357 hobo 11 1468 3.0 2.5 2.8 2.9 1507 chrX 10550850 intron spri - chrX 10551604 intron spri - chrX 10552357 intron spri - chrX_11_10550001 chrX_10550001 D8 2079 chrX 10686050 10686080 chrX 10691187 10691218 roo 11 5138 4.5 3.0 3.8 2.3 5168 chrX 10686050 intron X11Lbeta + chrX 10688634 intron X11Lbeta + chrX 10691218 intron X11Lbeta + chrX_11_10685001 chrX_10685001 D8 2082 chrX 10772678 10772697 chrX 10772762 10772781 Tirant 7 84 5.5 3.0 4.2 1.3 103 chrX 10772678 intron CG15211 + chrX 10772730 intron CG15211 + chrX 10772781 intron CG15211 + chrX_7_10770001 chrX_10770001 D8 2085 chrX 11095995 11096029 chrX 11103098 11103132 HMS-Beagle 7 7103 2.0 5.0 3.5 1.6 7137 chrX 11095995 intergenic not near genes chrX 11099564 intergenic not near genes chrX 11103132 intron CG42249 + chrX_7_11095001 chrX_11095001 D8 2089 chrX 11268563 11268595 chrX 11270057 11270082 hopper2 18 1492 2.5 8.0 5.2 2.9 1519 chrX 11268563 intron CG44422 - chrX 11269322 intron CG44422 - chrX 11270082 intron CG44422 - chrX_18_11265001 chrX_11265001 D8 2091 chrX 11312055 11312090 chrX 11319409 11319444 Stalker2 14 7354 6.0 7.0 6.5 1.9 7389 chrX 11312055 intergenic not near genes chrX 11315750 intergenic not near genes chrX 11319444 intergenic not near genes chrX_14_11315001 chrX_11315001 D8 2095 chrX 11535038 11535046 chrX 11541509 11541517 Burdock 6 6471 6.5 2.0 4.2 1.2 6479 chrX 11535038 intron Drak + chrX 11538278 intron Drak + chrX 11541517 intron Drak + chrX_6_11535001 chrX_11535001 D8 2096 chrX 11633421 11633449 chrX 11640476 11640504 297 14 7055 4.5 4.5 4.5 2.5 7083 chrX 11633421 intron Ptp10D + chrX 11636962 intron Ptp10D + chrX 11640504 intron Ptp10D + chrX_14_11635001 chrX_11635001 D8 2097 chrX 11645106 11645137 chrX 11648276 11648308 NOF 6 3170 1.5 2.5 2.0 2.0 3202 chrX 11645106 intron Ptp10D + chrX 11646707 intron Ptp10D + chrX 11648308 intron Ptp10D + chrX_6_11645001 chrX_11645001 D8 2102 chrX 12168134 12168166 chrX 12173577 12173609 I-element 8 5443 1.0 4.5 2.8 2.1 5475 chrX 12168134 intron Ten-a + chrX 12170872 intron Ten-a + chrX 12173609 intron Ten-a + chrX_8_12170001 chrX_12170001 D8 2117 chrX 13429461 13429490 chrX 13430611 13430640 jockey 8 1150 3.5 3.0 3.2 1.9 1179 chrX 13429461 intergenic not near genes chrX 13430050 intergenic not near genes chrX 13430640 intergenic not near genes chrX_8_13430001 chrX_13430001 D8 2119 chrX 13463652 13463673 chrX 13469230 13469251 mdg3 8 5578 5.5 3.0 4.2 1.5 5599 chrX 13463652 intron Neto + chrX 13466452 intron Neto + chrX 13469251 intron Neto + chrX_8_13465001 chrX_13465001 D8 2126 chrX 14105021 14105054 chrX 14114173 14114206 roo 9 9152 3.5 3.5 3.5 2.0 9185 chrX 14105021 intergenic not near genes chrX 14109614 intergenic not near genes chrX 14114206 5` UTR CR44657 + chrX_9_14105001 chrX_14105001 D8 2132 chrX 14416313 14416340 chrX 14421082 14421108 F-element 6 4769 0.0 4.5 2.2 1.9 4795 chrX 14416313 intron dpr8 + chrX 14418710 intron dpr8 + chrX 14421108 intron dpr8 + chrX_6_14415001 chrX_14415001 D8 2135 chrX 14636465 14636493 chrX 14641907 14641935 I-element 7 5442 3.5 6.0 4.8 1.2 5470 chrX 14636465 intron NetA - chrX 14639200 intron NetA - chrX 14641935 intron NetA - chrX_7_14635001 chrX_14635001 D8 2137 chrX 14778025 14778059 chrX 14782823 14782857 Doc 9 4798 3.5 6.5 5.0 1.5 4832 chrX 14778025 intergenic CG5347 + chrX 14780441 intergenic not near genes chrX 14782857 intergenic Ag5r2 - chrX_9_14780001 chrX_14780001 D8 2138 chrX 14818767 14818794 chrX 14823972 14823999 copia 6 5205 5.5 4.5 5.0 1.0 5232 chrX 14818767 intron rut - chrX 14821383 intron rut - chrX 14823999 intron rut - chrX_6_14820001 chrX_14820001 D8 2139 chrX 14936863 14936886 chrX 14946121 14946144 roo 6 9258 5.5 4.0 4.8 1.0 9281 chrX 14936863 intron pdgy - chrX 14941504 intron pdgy - chrX 14946144 intron pdgy - chrX_6_14940001 chrX_14940001 D8 2145 chrX 15273704 15273738 chrX 15274871 15274906 1360 14 1168 5.5 6.5 6.0 2.0 1202 chrX 15273704 intergenic not near genes chrX 15274305 intergenic not near genes chrX 15274906 intergenic not near genes chrX_14_15270001 chrX_15270001 D8 2148 chrX 15413048 15413077 chrX 15417351 15417380 Juan 11 4302 5.0 5.5 5.2 1.8 4332 chrX 15413048 intron Cngl - chrX 15415214 intron Cngl - chrX 15417380 intron Cngl - chrX_11_15415001 chrX_15415001 D8 2150 chrX 15435687 15435704 chrX 15436121 15436138 rover 8 434 1.5 6.5 4.0 1.6 451 chrX 15435687 intron Cngl - chrX 15435912 intron Cngl - chrX 15436138 intron Cngl - chrX_8_15435001 chrX_15435001 D8 2160 chrX 16222781 16222800 chrX 16231132 16231151 roo 5 8351 2.5 1.5 2.0 1.7 8370 chrX 16222781 intergenic not near genes chrX 16226966 intergenic not near genes chrX 16231151 intergenic not near genes chrX_5_16225001 chrX_16225001 D8 2164 chrX 16492644 16492677 chrX 16498222 16498255 mdg3 17 5578 4.0 6.0 5.0 2.8 5611 chrX 16492644 intron para - chrX 16495450 intron para - chrX 16498255 intron para - chrX_17_16495001 chrX_16495001 D8 2171 chrX 16936003 16936034 chrX 16936422 16936453 jockey 6 419 0.0 2.5 1.2 2.7 450 chrX 16936003 intron CG4928 + chrX 16936228 intron CG4928 + chrX 16936453 intron CG4928 + chrX_6_16935001 chrX_16935001 D8 2186 chrX 17556940 17556961 chrX 17557440 17557452 mdg1 6 498 4.0 4.5 4.2 1.2 512 chrX 17556940 intron CG43658 - chrX 17557196 intron CG43658 - chrX 17557452 intron CG43658 - chrX_6_17555001 chrX_17555001 D8 2189 chrX 17792956 17792980 chrX 17796255 17796279 flea 5 3299 5.5 2.5 4.0 1.0 3323 chrX 17792956 intron OdsH + chrX 17794618 intron OdsH + chrX 17796279 intron OdsH + chrX_5_17790001 chrX_17790001 D8 2194 chrX 18194069 18194101 chrX 18194605 18194637 BS 14 536 2.0 3.0 2.5 4.0 568 chrX 18194069 intron Frq2 + chrX 18194353 intron Frq2 + chrX 18194637 intron Frq2 + chrX_14_18190001 chrX_18190001 D8 2200 chrX 18429493 18429526 chrX 18434805 18434831 Transpac 12 5311 5.0 2.5 3.8 2.5 5338 chrX 18429493 intergenic not near genes chrX 18432162 intergenic not near genes chrX 18434831 intergenic not near genes chrX_12_18430001 chrX_18430001 D8 2213 chrX 19060408 19060434 chrX 19065193 19065219 Doc 5 4785 2.0 2.5 2.2 1.6 4811 chrX 19060408 intron CG14190 + chrX 19062814 intron CG14190 + chrX 19065219 intron CG14190 + chrX_5_19060001 chrX_19060001 D8 2223 chrX 19136561 19136580 chrX 19143482 19143500 412 5 6921 5.5 2.5 4.0 1.0 6939 chrX 19136561 intergenic not near genes chrX 19140030 intergenic not near genes chrX 19143500 3` UTR RhoGAP18B - chrX_5_19140001 chrX_19140001 D8 2228 chrX 19356986 19357014 chrX 19358428 19358456 NOF 6 1442 4.0 0.0 2.0 2.0 1470 chrX 19356986 intron kek5 + chrX 19357721 intron kek5 + chrX 19358456 intron kek5 + chrX_6_19355001 chrX_19355001 D8 2229 chrX 19380165 19380183 chrX 19380407 19380425 pogo 4 242 3.0 2.5 2.8 1.1 260 chrX 19380165 intron kek5 + chrX 19380295 intron kek5 + chrX 19380425 intron kek5 + chrX_4_19380001 chrX_19380001 D8 2231 chrX 19472118 19472156 chrX 19472689 19472727 jockey 9 570 3.5 2.0 2.8 2.4 609 chrX 19472118 intergenic kek5 + chrX 19472422 intergenic not near genes chrX 19472727 intergenic not near genes chrX_9_19470001 chrX_19470001 D8 2233 chrX 19710070 19710104 chrX 19711857 19711891 S-element 25 1787 5.5 7.0 6.2 3.5 1821 chrX 19710070 intron meso18E - chrX 19710980 intron meso18E - chrX 19711891 intron meso18E - chrX_25_19710001 chrX_19710001 D8 2248 chrX 20377327 20377332 chrX 20378795 20378800 hobo 4 1468 7.0 6.5 6.8 0.5 1473 chrX 20377327 intergenic not near genes chrX 20378064 intergenic not near genes chrX 20378800 intergenic not near genes chrX_4_20375001 chrX_20375001 D8 2249 chrX 20377333 20377349 chrX 20378784 20378817 hobo 15 1466 4.0 5.0 4.5 2.7 1484 chrX 20377333 intergenic not near genes chrX 20378075 intergenic not near genes chrX 20378817 intergenic not near genes chrX_15_20375001 chrX_20375001 D8 2252 chrX 20504125 20504158 chrX 20505647 20505680 transib2 12 1522 2.0 7.0 4.5 2.2 1555 chrX 20504125 intron RhoGAP19D - chrX 20504902 intron RhoGAP19D - chrX 20505680 intron RhoGAP19D - chrX_12_20500001 chrX_20500001 D8 2261 chrX 20836728 20836755 chrX 20844331 20844358 roo 6 7603 1.0 3.5 2.2 1.9 7630 chrX 20836728 intron shakB - chrX 20840543 intron shakB - chrX 20844358 intron shakB - chrX_6_20840001 chrX_20840001 D8 2263 chrX 20940719 20940756 chrX 20942189 20942206 hobo 12 1468 4.0 4.5 4.2 2.3 1487 chrX 20940719 intergenic not near genes chrX 20941462 intergenic not near genes chrX 20942206 intergenic not near genes chrX_12_20940001 chrX_20940001 D8 2272 chrX 21086128 21086164 chrX 21087158 21087194 jockey 17 1030 1.5 3.5 2.5 4.9 1066 chrX 21086128 intergenic not near genes chrX 21086661 intergenic not near genes chrX 21087194 intergenic not near genes chrX_17_21085001 chrX_21085001 D8 2283 chrX 21458691 21458716 chrX 21464128 21464153 Ivk 13 5437 2.5 3.0 2.8 3.4 5462 chrX 21458691 intergenic not near genes chrX 21461422 intergenic not near genes chrX 21464153 intergenic not near genes chrX_13_21460001 chrX_21460001 D8 2284 chrX 21474407 21474433 chrX 21474774 21474800 1731 8 366 3.5 3.0 3.2 1.9 393 chrX 21474407 intergenic not near genes chrX 21474604 intergenic not near genes chrX 21474800 intergenic not near genes chrX_8_21470001 chrX_21470001 D8 2287 chrX 22522635 22522646 chrX 22525456 22525467 NOF 4 2821 5.5 5.5 5.5 0.6 2832 chrX 22522635 intron CG17600 + chrX 22524051 intron CG17600 + chrX 22525467 intron CG17600 + chrX_4_22520001 chrX_22520001 D8 2291 chrX 22697496 22697519 chrX 22701794 22701817 Juan 7 4298 5.5 6.0 5.8 1.0 4321 chrX 22697496 intron CR44997 + chrX 22699656 intron CR44997 + chrX 22701817 intron CR44997 + chrX_7_22695001 chrX_22695001 D8 2292 chrX 22771503 22771535 chrX 22774795 22774827 297 7 3292 3.5 4.5 4.0 1.4 3324 chrX 22771503 intron CR44997 + chrX 22773165 intron CR44997 + chrX 22774827 intron CR44997 + chrX_7_22770001 chrX_22770001 D8 2296 chrX 22811990 22812003 chrX 22816763 22816776 F-element 7 4773 8.5 6.0 7.2 0.9 4786 chrX 22811990 intergenic CG12446 - chrX 22814383 intergenic not near genes chrX 22816776 intergenic not near genes chrX_7_22810001 chrX_22810001 D8 2300 chrX 22967390 22967418 chrX 23154542 23154570 diver 5 187152 1.5 4.5 3.0 1.2 187180 chrX 22967390 intergenic not near genes chrX 23060980 intergenic not near genes chrX 23154570 intergenic not near genes chrX_5_23060001 chrX_23060001 D8 2301 chrX 22987104 22987133 chrX 22989764 22989793 Burdock 5 2660 0.0 0.5 0.2 4.2 2689 chrX 22987104 intron,intron stnA -,stnB - chrX 22988448 intron,intron stnA -,stnB - chrX 22989793 intron,intron stnA -,stnB - chrX_5_22985001 chrX_22985001 D8 2303 chrX 22996313 22996340 chrX 23003546 23003573 roo 6 7233 5.0 4.0 4.5 1.1 7260 chrX 22996313 intron,intron stnA -,stnB - chrX 22999943 intron,intron stnA -,stnB - chrX 23003573 intron,intron stnA -,stnB - chrX_6_22995001 chrX_22995001 D8