SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 47457 47490 chr2L 52563 52596 jockey 16 5106 6.5 3.5 5.0 2.7 5139 chr2L 47457 intron Cda5 - chr2L 50026 intron Cda5 - chr2L 52596 intron Cda5 - chr2L_16_50001 chr2L_50001 D4-c1 2 chr2L 53352 53389 chr2L 53510 53547 16 158 3.5 3.5 3.5 3.6 195 chr2L 53352 intron Cda5 - chr2L 53450 intron Cda5 - chr2L 53547 intron Cda5 - chr2L_16_50001 chr2L_50001 D4-c1 3 chr2L 129434 129467 chr2L 133983 134016 8 4549 41.0 25.5 33.2 0.2 4582 chr2L 129434 intron,intron CG11455 +,CG3164 - chr2L 131725 intron CG11455 + chr2L 134016 intron,3` UTR CG11455 +,Gs1 + chr2L_8_130001 chr2L_130001 D4-c1 4 chr2L 134141 134175 chr2L 134226 134260 13 85 2.5 2.5 2.5 3.7 119 chr2L 134141 intron,3` UTR CG11455 +,Gs1 + chr2L 134200 intron,3` UTR CG11455 +,Gs1 + chr2L 134260 intron,3` UTR CG11455 +,Gs1 + chr2L_13_130001 chr2L_130001 D4-c1 5 chr2L 134862 134865 chr2L 134951 134954 6 89 18.0 3.5 10.8 0.5 92 chr2L 134862 intron CG11455 + chr2L 134908 intron CG11455 + chr2L 134954 intron CG11455 + chr2L_6_130001 chr2L_130001 D4-c1 6 chr2L 172060 172089 chr2L 172142 172171 12 82 1.5 5.0 3.2 2.9 111 chr2L 172060 intron spen + chr2L 172116 intron spen + chr2L 172171 intron spen + chr2L_12_170001 chr2L_170001 D4-c1 7 chr2L 179464 179491 chr2L 179544 179575 13 84 5.5 4.0 4.8 2.2 111 chr2L 179464 intron spen + chr2L 179520 intron spen + chr2L 179575 intron spen + chr2L_13_175001 chr2L_175001 D4-c1 8 chr2L 263303 263319 chr2L 263450 263466 11 147 0.5 5.5 3.0 2.8 163 chr2L 263303 intron,3` UTR CG3645 -,CG17075 - chr2L 263384 intron,3` UTR CG3645 -,CG17075 - chr2L 263466 intron,3` UTR CG3645 -,CG17075 - chr2L_11_260001 chr2L_260001 D4-c1 9 chr2L 300795 300831 chr2L 300873 300908 11 78 3.0 3.5 3.2 2.6 113 chr2L 300795 intron Pi3K21B + chr2L 300852 intron Pi3K21B + chr2L 300908 intron Pi3K21B + chr2L_11_300001 chr2L_300001 D4-c1 10 chr2L 307232 307252 chr2L 307384 307404 14 152 9.5 6.0 7.8 1.6 172 chr2L 307232 intron Plc21C + chr2L 307318 intron Plc21C + chr2L 307404 intron Plc21C + chr2L_14_305001 chr2L_305001 D4-c1 11 chr2L 325139 325150 chr2L 325204 325228 6 76 6.5 5.0 5.8 0.9 89 chr2L 325139 intron Plc21C + chr2L 325184 intron Plc21C + chr2L 325228 intron Plc21C + chr2L_6_325001 chr2L_325001 D4-c1 12 chr2L 347885 347913 chr2L 355386 355414 blood 9 7501 3.5 4.5 4.0 1.8 7529 chr2L 347885 3` UTR Plc21C + chr2L 351650 intron Plc21C + chr2L 355414 3` UTR Plc21C + chr2L_9_350001 chr2L_350001 D4-c1 13 chr2L 407946 407973 chr2L 408028 408055 6 82 4.5 2.5 3.5 1.3 109 chr2L 407946 3` UTR RpI135 + chr2L 408000 intergenic AP-2alpha -,RpI135 + chr2L 408055 3` UTR AP-2alpha - chr2L_6_405001 chr2L_405001 D4-c1 14 chr2L 467358 467364 chr2L 467458 467464 5 100 9.0 9.0 9.0 0.5 106 chr2L 467358 intron CG4297 - chr2L 467411 intron CG4297 - chr2L 467464 intron CG4297 - chr2L_5_465001 chr2L_465001 D4-c1 15 chr2L 510227 510250 chr2L 510315 510338 8 88 4.5 13.0 8.8 0.8 111 chr2L 510227 intron ush + chr2L 510282 intron ush + chr2L 510338 intron ush + chr2L_8_510001 chr2L_510001 D4-c1 16 chr2L 630558 630587 chr2L 630662 630698 13 105 4.0 0.0 2.0 4.3 140 chr2L 630558 intergenic not near genes chr2L 630628 intergenic not near genes chr2L 630698 intergenic not near genes chr2L_13_630001 chr2L_630001 D4-c1 17 chr2L 632707 632734 chr2L 632788 632815 13 78 7.5 4.0 5.8 1.9 108 chr2L 632707 intergenic not near genes chr2L 632761 intergenic not near genes chr2L 632815 intergenic not near genes chr2L_13_630001 chr2L_630001 D4-c1 18 chr2L 668431 668466 chr2L 668512 668544 12 81 4.5 4.5 4.5 2.2 113 chr2L 668431 intron ds - chr2L 668488 intron ds - chr2L 668544 intron ds - chr2L_12_665001 chr2L_665001 D4-c1 19 chr2L 686916 686952 chr2L 695957 695993 roo 16 9041 4.0 2.5 3.2 3.8 9077 chr2L 686916 intron ds - chr2L 691454 intron ds - chr2L 695993 intron ds - chr2L_16_690001 chr2L_690001 D4-c1 20 chr2L 736880 736903 chr2L 736986 737009 18 106 4.5 8.5 6.5 2.4 129 chr2L 736880 intergenic Eaat2 - chr2L 736944 intergenic Eaat2 - chr2L 737009 intergenic Eaat2 - chr2L_18_735001 chr2L_735001 D4-c1 21 chr2L 770466 770493 chr2L 772248 772275 Bari1 13 1782 5.5 8.5 7.0 1.6 1809 chr2L 770466 intergenic not near genes chr2L 771370 intergenic not near genes chr2L 772275 intergenic CR44614 + chr2L_13_770001 chr2L_770001 D4-c1 22 chr2L 844936 844970 chr2L 845024 845058 16 88 4.5 5.5 5.0 2.7 122 chr2L 844936 intron drongo - chr2L 844997 intron drongo - chr2L 845058 intron drongo - chr2L_16_840001 chr2L_840001 D4-c1 23 chr2L 849477 849486 chr2L 849563 849578 6 91 6.5 4.5 5.5 0.9 101 chr2L 849477 intron drongo - chr2L 849528 intron drongo - chr2L 849578 intron drongo - chr2L_6_845001 chr2L_845001 D4-c1 24 chr2L 877839 877872 chr2L 877921 877928 15 80 5.5 4.0 4.8 2.6 89 chr2L 877839 3` UTR,exon CG15824 -,ninaA + chr2L 877884 3` UTR,intron CG15824 -,ninaA + chr2L 877928 3` UTR,intron CG15824 -,ninaA + chr2L_15_875001 chr2L_875001 D4-c1 25 chr2L 955991 955994 chr2L 956087 956091 4 97 0.0 12.5 6.2 0.6 100 chr2L 955991 intron CG4341 + chr2L 956041 intron CG4341 + chr2L 956091 intron CG4341 + chr2L_4_955001 chr2L_955001 D4-c1 26 chr2L 958957 958984 chr2L 959085 959112 17 128 7.0 1.5 4.2 3.3 155 chr2L 958957 intergenic not near genes chr2L 959034 intergenic not near genes chr2L 959112 intergenic not near genes chr2L_17_955001 chr2L_955001 D4-c1 27 chr2L 976882 976910 chr2L 984519 984547 roo 17 7636 1.5 3.0 2.2 5.3 7665 chr2L 976882 intergenic not near genes chr2L 980714 intergenic not near genes chr2L 984547 intergenic not near genes chr2L_17_980001 chr2L_980001 D4-c1 28 chr2L 1066092 1066126 chr2L 1066174 1066208 17 81 5.0 6.0 5.5 2.6 116 chr2L 1066092 intron S - chr2L 1066150 intron S - chr2L 1066208 intron S - chr2L_17_1065001 chr2L_1065001 D4-c1 29 chr2L 1156858 1156874 chr2L 1156964 1156972 5 104 8.0 4.0 6.0 0.7 114 chr2L 1156858 intron capt - chr2L 1156915 intron capt - chr2L 1156972 intron capt - chr2L_5_1155001 chr2L_1155001 D4-c1 30 chr2L 1220127 1220159 chr2L 1227594 1227626 blood 20 7466 7.5 4.0 5.8 2.9 7499 chr2L 1220127 intron CG42329 + chr2L 1223876 intron CG42329 + chr2L 1227626 intron CG42329 + chr2L_20_1220001 chr2L_1220001 D4-c1 31 chr2L 1261245 1261257 chr2L 1261327 1261339 5 82 0.0 4.0 2.0 1.7 94 chr2L 1261245 intron robo3 + chr2L 1261292 intron robo3 + chr2L 1261339 intron robo3 + chr2L_5_1260001 chr2L_1260001 D4-c1 32 chr2L 1301749 1301783 chr2L 1302289 1302323 gypsy 11 540 6.5 4.5 5.5 1.7 574 chr2L 1301749 intergenic not near genes chr2L 1302036 intergenic not near genes chr2L 1302323 intergenic not near genes chr2L_11_1300001 chr2L_1300001 D4-c1 33 chr2L 1322024 1322050 chr2L 1322114 1322140 11 90 2.5 6.0 4.2 2.1 116 chr2L 1322024 intergenic not near genes chr2L 1322082 intergenic not near genes chr2L 1322140 intergenic not near genes chr2L_11_1320001 chr2L_1320001 D4-c1 34 chr2L 1370249 1370278 chr2L 1370415 1370444 13 165 4.5 3.5 4.0 2.6 195 chr2L 1370249 intergenic not near genes chr2L 1370346 intergenic not near genes chr2L 1370444 intergenic not near genes chr2L_13_1370001 chr2L_1370001 D4-c1 35 chr2L 1438827 1438855 chr2L 1438908 1438936 7 81 2.0 2.0 2.0 2.3 109 chr2L 1438827 intergenic not near genes chr2L 1438882 intergenic not near genes chr2L 1438936 intergenic not near genes chr2L_7_1435001 chr2L_1435001 D4-c1 36 chr2L 1443347 1443360 chr2L 1443428 1443441 5 80 0.0 9.0 4.5 0.9 94 chr2L 1443347 3` UTR CG43402 + chr2L 1443394 3` UTR CG43402 + chr2L 1443441 3` UTR CG43402 + chr2L_5_1440001 chr2L_1440001 D4-c1 37 chr2L 1450696 1450728 chr2L 1450782 1450814 17 85 6.0 3.0 4.5 3.1 118 chr2L 1450696 intergenic not near genes chr2L 1450755 intergenic not near genes chr2L 1450814 intergenic not near genes chr2L_17_1450001 chr2L_1450001 D4-c1 38 chr2L 1458248 1458262 chr2L 1458326 1458340 8 78 6.5 9.0 7.8 0.9 92 chr2L 1458248 intergenic not near genes chr2L 1458294 intergenic not near genes chr2L 1458340 intergenic not near genes chr2L_8_1455001 chr2L_1455001 D4-c1 39 chr2L 1534056 1534085 chr2L 1534387 1534416 18 331 4.5 2.5 3.5 4.0 360 chr2L 1534056 intergenic not near genes chr2L 1534236 intergenic not near genes chr2L 1534416 intergenic not near genes chr2L_18_1530001 chr2L_1530001 D4-c1 40 chr2L 1536500 1536521 chr2L 1536630 1536654 8 133 0.0 4.0 2.0 2.7 154 chr2L 1536500 intergenic not near genes chr2L 1536577 intergenic not near genes chr2L 1536654 intergenic not near genes chr2L_8_1535001 chr2L_1535001 D4-c1 41 chr2L 1570683 1570718 chr2L 1573556 1573590 F-element 16 2873 7.0 5.0 6.0 2.3 2907 chr2L 1570683 intron haf + chr2L 1572136 intron haf + chr2L 1573590 intron haf + chr2L_16_1570001 chr2L_1570001 D4-c1 42 chr2L 1581917 1581947 chr2L 1582023 1582052 19 105 2.5 5.0 3.8 4.0 135 chr2L 1581917 intron haf + chr2L 1581984 intron haf + chr2L 1582052 intron haf + chr2L_19_1580001 chr2L_1580001 D4-c1 43 chr2L 1590962 1590988 chr2L 1591033 1591065 9 76 3.0 2.5 2.8 2.4 103 chr2L 1590962 intron haf + chr2L 1591014 intron haf + chr2L 1591065 intron haf + chr2L_9_1590001 chr2L_1590001 D4-c1 44 chr2L 1628844 1628856 chr2L 1628934 1628946 8 90 1.0 4.0 2.5 2.3 102 chr2L 1628844 intergenic not near genes chr2L 1628895 intergenic not near genes chr2L 1628946 intergenic not near genes chr2L_8_1625001 chr2L_1625001 D4-c1 45 chr2L 1638156 1638183 chr2L 1638242 1638269 11 86 4.0 7.5 5.8 1.6 113 chr2L 1638156 intergenic not near genes chr2L 1638212 intergenic not near genes chr2L 1638269 intergenic not near genes chr2L_11_1635001 chr2L_1635001 D4-c1 46 chr2L 1662023 1662032 chr2L 1662109 1662118 4 86 5.0 0.5 2.8 1.1 95 chr2L 1662023 intron chinmo + chr2L 1662070 intron chinmo + chr2L 1662118 intron chinmo + chr2L_4_1660001 chr2L_1660001 D4-c1 47 chr2L 1678958 1679002 chr2L 1686442 1686468 blood 4 7470 0.0 5.0 2.5 1.1 7510 chr2L 1678958 intron chinmo + chr2L 1682713 intron chinmo + chr2L 1686468 intron chinmo + chr2L_4_1680001 chr2L_1680001 D4-c1 48 chr2L 1711353 1711387 chr2L 1711678 1711712 mdg3 13 324 6.5 7.5 7.0 1.6 359 chr2L 1711353 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711532 3` UTR frtz - chr2L 1711712 3` UTR frtz - chr2L_13_1710001 chr2L_1710001 D4-c1 49 chr2L 1721827 1721853 chr2L 1721912 1721938 7 84 0.0 4.0 2.0 2.3 111 chr2L 1721827 intron Rim2 - chr2L 1721882 intron Rim2 - chr2L 1721938 intron Rim2 - chr2L_7_1720001 chr2L_1720001 D4-c1 50 chr2L 1878241 1878271 chr2L 1878364 1878396 13 125 2.5 3.0 2.8 3.4 155 chr2L 1878241 intron CG31663 - chr2L 1878318 intron CG31663 - chr2L 1878396 intron CG31663 - chr2L_13_1875001 chr2L_1875001 D4-c1 51 chr2L 1907613 1907619 chr2L 1907693 1907699 7 80 0.0 9.5 4.8 1.2 86 chr2L 1907613 intron CG7337 + chr2L 1907656 intron CG7337 + chr2L 1907699 intron CG7337 + chr2L_7_1905001 chr2L_1905001 D4-c1 52 chr2L 1910538 1910565 chr2L 1910628 1910655 10 90 3.0 3.0 3.0 2.5 117 chr2L 1910538 intron CG7337 + chr2L 1910596 intron CG7337 + chr2L 1910655 intron CG7337 + chr2L_10_1910001 chr2L_1910001 D4-c1 53 chr2L 2004841 2004874 chr2L 2005285 2005318 16 444 4.0 2.5 3.2 3.8 477 chr2L 2004841 intron CG33543 - chr2L 2005080 intron CG33543 - chr2L 2005318 intron CG33543 - chr2L_16_2005001 chr2L_2005001 D4-c1 54 chr2L 2100377 2100408 chr2L 2109529 2109551 roo 15 9151 5.5 8.0 6.8 1.9 9174 chr2L 2100377 intron dpr3 - chr2L 2104964 intron dpr3 - chr2L 2109551 intron dpr3 - chr2L_15_2100001 chr2L_2100001 D4-c1 55 chr2L 2112110 2112146 chr2L 2119773 2119809 opus 21 7659 6.0 7.5 6.8 2.7 7699 chr2L 2112110 intergenic not near genes chr2L 2115960 intergenic not near genes chr2L 2119809 intergenic not near genes chr2L_21_2115001 chr2L_2115001 D4-c1 56 chr2L 2250418 2250443 chr2L 2251186 2251211 11 768 4.5 0.0 2.2 3.4 793 chr2L 2250418 intergenic Ser12 - chr2L 2250814 exon Ser12 - chr2L 2251211 exon Ser12 - chr2L_11_2250001 chr2L_2250001 D4-c1 57 chr2L 2256472 2256476 chr2L 2256553 2256557 7 81 5.0 5.0 5.0 1.2 85 chr2L 2256472 intergenic not near genes chr2L 2256514 intergenic not near genes chr2L 2256557 intergenic not near genes chr2L_7_2255001 chr2L_2255001 D4-c1 58 chr2L 2260801 2260837 chr2L 2260888 2260924 16 87 3.0 4.0 3.5 3.6 123 chr2L 2260801 intergenic not near genes chr2L 2260862 intergenic not near genes chr2L 2260924 intergenic not near genes chr2L_16_2260001 chr2L_2260001 D4-c1 59 chr2L 2282982 2283014 chr2L 2283143 2283175 17 161 3.5 3.5 3.5 3.8 193 chr2L 2282982 intergenic not near genes chr2L 2283078 intergenic not near genes chr2L 2283175 intergenic not near genes chr2L_17_2280001 chr2L_2280001 D4-c1 60 chr2L 2294040 2294070 chr2L 2299246 2299276 copia 15 5205 6.0 6.5 6.2 2.1 5236 chr2L 2294040 intergenic not near genes chr2L 2296658 intergenic not near genes chr2L 2299276 intergenic not near genes chr2L_15_2295001 chr2L_2295001 D4-c1 61 chr2L 2299334 2299359 chr2L 2299413 2299438 8 79 3.5 5.5 4.5 1.5 104 chr2L 2299334 intergenic not near genes chr2L 2299386 intergenic not near genes chr2L 2299438 intergenic not near genes chr2L_8_2295001 chr2L_2295001 D4-c1 62 chr2L 2372362 2372404 chr2L 2372449 2372485 9 85 0.0 3.5 1.8 3.2 123 chr2L 2372362 intergenic CG3609 - chr2L 2372424 intergenic CG3609 - chr2L 2372485 3` UTR CG3609 - chr2L_9_2370001 chr2L_2370001 D4-c1 63 chr2L 2392156 2392182 chr2L 2392267 2392293 11 111 2.0 2.5 2.2 3.4 137 chr2L 2392156 intron VGlut + chr2L 2392224 intron VGlut + chr2L 2392293 intron VGlut + chr2L_11_2390001 chr2L_2390001 D4-c1 64 chr2L 2503437 2503466 chr2L 2505036 2505065 10 1599 2.5 6.0 4.2 1.9 1628 chr2L 2503437 intergenic not near genes chr2L 2504251 intergenic not near genes chr2L 2505065 intergenic not near genes chr2L_10_2500001 chr2L_2500001 D4-c1 65 chr2L 2557201 2557214 chr2L 2557278 2557291 5 77 1.5 2.5 2.0 1.7 90 chr2L 2557201 intergenic not near genes chr2L 2557246 intergenic not near genes chr2L 2557291 intergenic not near genes chr2L_5_2555001 chr2L_2555001 D4-c1 66 chr2L 2565553 2565562 chr2L 2571627 2571635 297 8 6074 5.0 5.0 5.0 1.3 6082 chr2L 2565553 exon Cyp309a2 - chr2L 2568594 intron Cyp309a2 - chr2L 2571635 intron Cyp309a2 - chr2L_8_2565001 chr2L_2565001 D4-c1 67 chr2L 2587382 2587411 chr2L 2587621 2587650 13 239 5.0 10.5 7.8 1.5 268 chr2L 2587382 intergenic not near genes chr2L 2587516 intergenic not near genes chr2L 2587650 intergenic not near genes chr2L_13_2585001 chr2L_2585001 D4-c1 68 chr2L 2587814 2587848 chr2L 2587894 2587928 17 80 3.0 7.0 5.0 2.8 114 chr2L 2587814 intergenic not near genes chr2L 2587871 intergenic not near genes chr2L 2587928 intergenic not near genes chr2L_17_2585001 chr2L_2585001 D4-c1 69 chr2L 2618034 2618068 chr2L 2618114 2618148 21 80 4.5 2.5 3.5 4.7 114 chr2L 2618034 intergenic not near genes chr2L 2618091 intergenic not near genes chr2L 2618148 intergenic not near genes chr2L_21_2615001 chr2L_2615001 D4-c1 70 chr2L 2618350 2618382 chr2L 2618450 2618482 9 97 3.5 7.0 5.2 1.5 132 chr2L 2618350 intergenic not near genes chr2L 2618416 intergenic not near genes chr2L 2618482 intergenic not near genes chr2L_9_2615001 chr2L_2615001 D4-c1 71 chr2L 2625606 2625614 chr2L 2625682 2625691 6 77 4.0 5.0 4.5 1.1 85 chr2L 2625606 3` UTR CR45705 - chr2L 2625648 3` UTR CR45705 - chr2L 2625691 3` UTR CR45705 - chr2L_6_2625001 chr2L_2625001 D4-c1 72 chr2L 2661195 2661232 chr2L 2663034 2663071 I-element 16 1832 3.5 5.5 4.5 2.9 1876 chr2L 2661195 intergenic not near genes chr2L 2662133 intergenic not near genes chr2L 2663071 intergenic not near genes chr2L_16_2660001 chr2L_2660001 D4-c1 73 chr2L 2698875 2698892 chr2L 2698963 2698980 8 88 6.0 5.5 5.8 1.2 105 chr2L 2698875 intron CG31690 + chr2L 2698928 intron CG31690 + chr2L 2698980 intron CG31690 + chr2L_8_2695001 chr2L_2695001 D4-c1 74 chr2L 2772609 2772621 chr2L 2779194 2779204 297 4 6584 6.5 8.0 7.2 0.5 6595 chr2L 2772609 3` UTR Syt1 - chr2L 2775906 intron Syt1 - chr2L 2779204 3` UTR Syt1 - chr2L_4_2775001 chr2L_2775001 D4-c1 75 chr2L 2793940 2793977 chr2L 2794021 2794058 9 80 1.5 6.5 4.0 1.8 118 chr2L 2793940 intron Syt1 - chr2L 2793999 intron Syt1 - chr2L 2794058 intron Syt1 - chr2L_9_2790001 chr2L_2790001 D4-c1 76 chr2L 2826537 2826575 chr2L 2826630 2826661 10 89 0.0 3.0 1.5 4.0 124 chr2L 2826537 intron Duox - chr2L 2826599 intron Duox - chr2L 2826661 intron Duox - chr2L_10_2825001 chr2L_2825001 D4-c1 77 chr2L 3026217 3026251 chr2L 3026872 3026906 21 656 46.5 48.0 47.2 0.4 689 chr2L 3026217 3` UTR CG3542 + chr2L 3026562 3` UTR CG3605 - chr2L 3026906 exon CG3605 - chr2L_21_3025001 chr2L_3025001 D4-c1 78 chr2L 3044902 3044933 chr2L 3045000 3045030 15 98 6.0 5.0 5.5 2.3 128 chr2L 3044902 intron v(2)k05816 + chr2L 3044966 intron v(2)k05816 + chr2L 3045030 intron v(2)k05816 + chr2L_15_3040001 chr2L_3040001 D4-c1 79 chr2L 3073033 3073065 chr2L 3078237 3078269 copia 18 5204 5.5 7.5 6.5 2.4 5236 chr2L 3073033 intron toc - chr2L 3075651 intron toc - chr2L 3078269 intron toc - chr2L_18_3075001 chr2L_3075001 D4-c1 80 chr2L 3078480 3078519 chr2L 3078791 3078830 17 310 2.0 5.0 3.5 3.8 350 chr2L 3078480 intron toc - chr2L 3078655 intron toc - chr2L 3078830 intron toc - chr2L_17_3075001 chr2L_3075001 D4-c1 81 chr2L 3087381 3087416 chr2L 3087490 3087524 9 108 5.0 5.0 5.0 1.5 143 chr2L 3087381 intron toc - chr2L 3087452 intron toc - chr2L 3087524 intron toc - chr2L_9_3085001 chr2L_3085001 D4-c1 82 chr2L 3147272 3147308 chr2L 3147350 3147386 19 78 3.5 5.5 4.5 3.5 114 chr2L 3147272 3` UTR Mad - chr2L 3147329 3` UTR Mad - chr2L 3147386 3` UTR Mad - chr2L_19_3145001 chr2L_3145001 D4-c1 83 chr2L 3156530 3156563 chr2L 3156627 3156650 6 96 2.5 1.5 2.0 2.0 120 chr2L 3156530 intron Mad - chr2L 3156590 intron Mad - chr2L 3156650 intron Mad - chr2L_6_3155001 chr2L_3155001 D4-c1 84 chr2L 3191442 3191460 chr2L 3191539 3191557 14 97 3.5 4.5 4.0 2.8 115 chr2L 3191442 intron CG34393 - chr2L 3191500 intron CG34393 - chr2L 3191557 intron CG34393 - chr2L_14_3190001 chr2L_3190001 D4-c1 85 chr2L 3193828 3193863 chr2L 3193915 3193950 12 87 5.5 3.0 4.2 2.3 122 chr2L 3193828 intron CG34393 - chr2L 3193889 intron CG34393 - chr2L 3193950 intron CG34393 - chr2L_12_3190001 chr2L_3190001 D4-c1 86 chr2L 3202737 3202767 chr2L 3210167 3210197 mdg1 16 7430 4.0 4.0 4.0 3.2 7460 chr2L 3202737 intergenic not near genes chr2L 3206467 intergenic not near genes chr2L 3210197 intergenic CR45336 + chr2L_16_3205001 chr2L_3205001 D4-c1 87 chr2L 3221498 3221533 chr2L 3221714 3221749 12 216 5.5 4.5 5.0 2.0 251 chr2L 3221498 intergenic not near genes chr2L 3221624 intergenic not near genes chr2L 3221749 intergenic not near genes chr2L_12_3220001 chr2L_3220001 D4-c1 88 chr2L 3251496 3251527 chr2L 3259062 3259093 springer 8 7566 3.0 7.0 5.0 1.3 7597 chr2L 3251496 intergenic not near genes chr2L 3255294 intergenic not near genes chr2L 3259093 intergenic not near genes chr2L_8_3255001 chr2L_3255001 D4-c1 89 chr2L 3261343 3261511 chr2L 3261492 3261604 9 143 0.0 0.0 0.0 9.0 261 chr2L 3261343 intergenic CR45337 -,CR45338 - chr2L 3261474 intergenic CR45338 -,CR45337 - chr2L 3261604 intergenic CR45338 -,CR45337 - chr2L_9_3260001 chr2L_3260001 D4-c1 90 chr2L 3291235 3291270 chr2L 3291316 3291351 15 80 4.0 7.0 5.5 2.3 116 chr2L 3291235 intergenic CG9664 - chr2L 3291293 3` UTR CG9664 - chr2L 3291351 3` UTR CG9664 - chr2L_15_3290001 chr2L_3290001 D4-c1 91 chr2L 3323255 3323283 chr2L 3323363 3323391 13 108 4.0 7.5 5.8 1.9 136 chr2L 3323255 intergenic CG8837 + chr2L 3323323 intergenic CG8837 + chr2L 3323391 intergenic CG8837 + chr2L_13_3320001 chr2L_3320001 D4-c1 92 chr2L 3388599 3388629 chr2L 3388841 3388871 pogo 8 242 5.5 3.0 4.2 1.5 272 chr2L 3388599 intergenic CG42460 - chr2L 3388735 intergenic CG42460 - chr2L 3388871 intergenic CG42460 -,CR44791 + chr2L_8_3385001 chr2L_3385001 D4-c1 93 chr2L 3393544 3393578 chr2L 3393656 3393690 14 112 2.0 4.0 3.0 3.5 146 chr2L 3393544 intergenic not near genes chr2L 3393617 intergenic not near genes chr2L 3393690 intergenic not near genes chr2L_14_3390001 chr2L_3390001 D4-c1 94 chr2L 3437156 3437162 chr2L 3437240 3437246 6 84 0.5 3.0 1.8 2.1 90 chr2L 3437156 intergenic not near genes chr2L 3437201 intergenic not near genes chr2L 3437246 intergenic not near genes chr2L_6_3435001 chr2L_3435001 D4-c1 95 chr2L 3508345 3508375 chr2L 3508424 3508454 12 79 2.5 7.5 5.0 2.0 109 chr2L 3508345 intergenic tim -,CR45299 + chr2L 3508400 intergenic CR45299 +,tim - chr2L 3508454 intergenic CR45299 +,tim - chr2L_12_3505001 chr2L_3505001 D4-c1 96 chr2L 3523032 3523055 chr2L 3523146 3523168 16 113 4.5 3.5 4.0 3.2 136 chr2L 3523032 exon Sr-CIV - chr2L 3523100 intron Sr-CIV - chr2L 3523168 exon Sr-CIV - chr2L_16_3520001 chr2L_3520001 D4-c1 97 chr2L 3544512 3544551 chr2L 3544607 3544646 19 94 2.5 4.5 3.5 4.2 134 chr2L 3544512 intron drm + chr2L 3544579 intron drm + chr2L 3544646 intron drm + chr2L_19_3540001 chr2L_3540001 D4-c1 98 chr2L 3616588 3616594 chr2L 3616666 3616672 4 78 0.0 9.5 4.8 0.7 84 chr2L 3616588 5` UTR CR44310 + chr2L 3616630 5` UTR CR44310 + chr2L 3616672 5` UTR CR44310 + chr2L_4_3615001 chr2L_3615001 D4-c1 99 chr2L 3634100 3634136 chr2L 3634183 3634219 15 83 6.5 5.0 5.8 2.2 119 chr2L 3634100 intron for - chr2L 3634160 intron for - chr2L 3634219 intron for - chr2L_15_3630001 chr2L_3630001 D4-c1 100 chr2L 3649789 3649807 chr2L 3654992 3655010 copia 9 5203 6.5 5.5 6.0 1.3 5221 chr2L 3649789 intron for - chr2L 3652400 intron for - chr2L 3655010 intron for - chr2L_9_3650001 chr2L_3650001 D4-c1 101 chr2L 3734660 3734687 chr2L 3734738 3734765 7 78 2.5 5.0 3.8 1.5 105 chr2L 3734660 intron CG10019 + chr2L 3734712 intron CG10019 + chr2L 3734765 intron CG10019 + chr2L_7_3730001 chr2L_3730001 D4-c1 102 chr2L 3819624 3819629 chr2L 3819701 3819706 4 77 0.0 5.5 2.8 1.1 82 chr2L 3819624 intergenic not near genes chr2L 3819665 intergenic not near genes chr2L 3819706 intergenic not near genes chr2L_4_3815001 chr2L_3815001 D4-c1 103 chr2L 3831852 3831863 chr2L 3831934 3831945 6 82 3.5 6.0 4.8 1.0 93 chr2L 3831852 intergenic not near genes chr2L 3831898 intergenic not near genes chr2L 3831945 intergenic not near genes chr2L_6_3830001 chr2L_3830001 D4-c1 104 chr2L 3862426 3862438 chr2L 3862511 3862523 5 85 1.5 0.0 0.8 2.8 97 chr2L 3862426 intergenic CG3964 +,CR44078 - chr2L 3862474 intergenic CG3964 +,CR44078 - chr2L 3862523 intergenic CG3964 +,CR44078 - chr2L_5_3860001 chr2L_3860001 D4-c1 105 chr2L 3891893 3891925 chr2L 3891979 3892011 10 86 2.0 3.0 2.5 2.9 118 chr2L 3891893 intron capu - chr2L 3891952 intron capu - chr2L 3892011 intron capu - chr2L_10_3890001 chr2L_3890001 D4-c1 106 chr2L 3943793 3943826 chr2L 3943885 3943918 5 92 2.5 3.0 2.8 1.3 125 chr2L 3943793 intron fred - chr2L 3943856 intron fred - chr2L 3943918 intron fred - chr2L_5_3940001 chr2L_3940001 D4-c1 107 chr2L 3959176 3959206 chr2L 3959253 3959283 16 77 5.5 2.0 3.8 3.3 107 chr2L 3959176 intron fred - chr2L 3959230 intron fred - chr2L 3959283 intron fred - chr2L_16_3955001 chr2L_3955001 D4-c1 108 chr2L 3997570 3997579 chr2L 3997658 3997668 8 89 0.0 11.0 5.5 1.2 98 chr2L 3997570 intergenic not near genes chr2L 3997619 intergenic not near genes chr2L 3997668 intergenic not near genes chr2L_8_3995001 chr2L_3995001 D4-c1 109 chr2L 4661845 4661857 chr2L 4669426 4669438 opus 7 7581 5.0 10.0 7.5 0.8 7593 chr2L 4661845 intergenic not near genes chr2L 4665642 intergenic not near genes chr2L 4669438 intergenic not near genes chr2L_7_4665001 chr2L_4665001 D4-c1 110 chr2L 4819496 4819517 chr2L 4819620 4819637 7 123 2.0 5.0 3.5 1.6 141 chr2L 4819496 intergenic not near genes chr2L 4819566 intergenic not near genes chr2L 4819637 intergenic not near genes chr2L_7_4815001 chr2L_4815001 D4-c1 111 chr2L 4841077 4841103 chr2L 4841154 4841180 12 77 6.5 10.0 8.2 1.3 103 chr2L 4841077 intron CG12194 + chr2L 4841128 intron CG12194 + chr2L 4841180 exon CG12194 + chr2L_12_4840001 chr2L_4840001 D4-c1 112 chr2L 4858464 4858479 chr2L 4858553 4858568 7 89 4.5 0.0 2.2 2.2 104 chr2L 4858464 intron pog + chr2L 4858516 intron pog + chr2L 4858568 intron pog + chr2L_7_4855001 chr2L_4855001 D4-c1 113 chr2L 4862282 4862310 chr2L 4862358 4862387 18 77 4.0 8.0 6.0 2.6 105 chr2L 4862282 intron pog + chr2L 4862334 intron pog + chr2L 4862387 intron pog + chr2L_18_4860001 chr2L_4860001 D4-c1 114 chr2L 4896443 4896477 chr2L 4896536 4896570 12 93 5.5 4.0 4.8 2.1 127 chr2L 4896443 intron CG3036 + chr2L 4896506 intron CG3036 + chr2L 4896570 intron CG3036 + chr2L_12_4895001 chr2L_4895001 D4-c1 115 chr2L 4918162 4918182 chr2L 4923236 4923256 jockey 4 5074 4.0 0.5 2.2 1.2 5094 chr2L 4918162 intron hoe1 - chr2L 4920709 intron hoe1 - chr2L 4923256 intron hoe1 - chr2L_4_4920001 chr2L_4920001 D4-c1 116 chr2L 5027958 5027989 chr2L 5028043 5028074 10 84 4.0 5.5 4.8 1.7 116 chr2L 5027958 intron vkg - chr2L 5028016 intron vkg - chr2L 5028074 intron vkg - chr2L_10_5025001 chr2L_5025001 D4-c1 117 chr2L 5117304 5117324 chr2L 5117387 5117407 10 83 3.5 4.0 3.8 2.1 103 chr2L 5117304 intron Msp300 + chr2L 5117356 intron Msp300 + chr2L 5117407 intron Msp300 + chr2L_10_5115001 chr2L_5115001 D4-c1 118 chr2L 5120978 5121006 chr2L 5121073 5121101 13 95 6.0 11.5 8.8 1.3 123 chr2L 5120978 intron Msp300 + chr2L 5121040 intron Msp300 + chr2L 5121101 intron Msp300 + chr2L_13_5120001 chr2L_5120001 D4-c1 119 chr2L 5207791 5207827 chr2L 5213800 5213836 22 6009 42.5 48.0 45.2 0.5 6045 chr2L 5207791 exon Cyp28d2 + chr2L 5210814 exon Cyp28d1 + chr2L 5213836 exon CG7742 - chr2L_22_5210001 chr2L_5210001 D4-c1 120 chr2L 5242936 5242937 chr2L 16217660 16217660 6 10974724 23.0 17.0 20.0 0.3 10974724 chr2L 5242936 intron tkv - chr2L 10730298 3` UTR,5` UTR CG6443 +,CG17118 + chr2L 16217660 intergenic not near genes chr2L_6_10730001 chr2L_10730001 D4-c1 121 chr2L 5262525 5262545 chr2L 5262603 5262623 10 78 9.5 11.5 10.5 0.9 98 chr2L 5262525 intron tkv - chr2L 5262574 intron tkv - chr2L 5262623 intron tkv - chr2L_10_5260001 chr2L_5260001 D4-c1 122 chr2L 5265539 5265722 chr2L 5269990 5270200 4 4458 29.5 38.0 33.8 0.1 4661 chr2L 5265539 intron,exon tkv -,Cyp4ac1 + chr2L 5267870 intron,exon tkv -,Cyp4ac2 + chr2L 5270200 intron,exon tkv -,Cyp4ac3 + chr2L_4_5265001 chr2L_5265001 D4-c1 123 chr2L 5342769 5342804 chr2L 5345150 5345177 Doc 10 2380 4.0 4.0 4.0 2.0 2408 chr2L 5342769 intergenic not near genes chr2L 5343973 intergenic not near genes chr2L 5345177 intergenic not near genes chr2L_10_5340001 chr2L_5340001 D4-c1 124 chr2L 5378432 5378452 chr2L 5378512 5378532 8 80 6.0 1.0 3.5 1.8 100 chr2L 5378432 intergenic not near genes chr2L 5378482 intergenic not near genes chr2L 5378532 intergenic not near genes chr2L_8_5375001 chr2L_5375001 D4-c1 125 chr2L 5398018 5398043 chr2L 5398092 5398124 12 78 5.5 5.5 5.5 1.8 106 chr2L 5398018 intergenic not near genes chr2L 5398071 intergenic not near genes chr2L 5398124 intergenic not near genes chr2L_12_5395001 chr2L_5395001 D4-c1 126 chr2L 5403136 5403170 chr2L 5403230 5403264 4 94 2.0 0.0 1.0 2.0 128 chr2L 5403136 intergenic not near genes chr2L 5403200 intergenic not near genes chr2L 5403264 intergenic not near genes chr2L_4_5400001 chr2L_5400001 D4-c1 127 chr2L 5475154 5475164 chr2L 5475260 5475270 7 106 4.5 3.5 4.0 1.4 116 chr2L 5475154 intergenic not near genes chr2L 5475212 intergenic not near genes chr2L 5475270 intergenic not near genes chr2L_7_5475001 chr2L_5475001 D4-c1 128 chr2L 5488015 5488036 chr2L 5488096 5488117 15 81 5.5 3.5 4.5 2.7 102 chr2L 5488015 intergenic not near genes chr2L 5488066 intergenic not near genes chr2L 5488117 intergenic not near genes chr2L_15_5485001 chr2L_5485001 D4-c1 129 chr2L 5827710 5827739 chr2L 5836719 5836748 roo 11 9008 6.5 5.5 6.0 1.6 9038 chr2L 5827710 intron TrissinR + chr2L 5832229 intron TrissinR + chr2L 5836748 intron TrissinR + chr2L_11_5830001 chr2L_5830001 D4-c1 130 chr2L 5839163 5839192 chr2L 5839253 5839277 16 87 4.0 6.0 5.0 2.7 114 chr2L 5839163 intron TrissinR + chr2L 5839220 intron TrissinR + chr2L 5839277 intron TrissinR + chr2L_16_5835001 chr2L_5835001 D4-c1 131 chr2L 5864676 5864699 chr2L 5865597 5865620 11 920 4.5 6.0 5.2 1.8 944 chr2L 5864676 intron rau - chr2L 5865148 intron rau - chr2L 5865620 intron rau - chr2L_11_5865001 chr2L_5865001 D4-c1 132 chr2L 5870474 5870506 chr2L 5870552 5870584 11 78 3.5 6.5 5.0 1.8 110 chr2L 5870474 intron rau - chr2L 5870529 intron rau - chr2L 5870584 intron rau - chr2L_11_5870001 chr2L_5870001 D4-c1 133 chr2L 5887600 5887629 chr2L 5887682 5887711 13 82 5.5 5.5 5.5 2.0 111 chr2L 5887600 3` UTR CR44577 - chr2L 5887656 3` UTR CR44577 - chr2L 5887711 3` UTR CR44577 - chr2L_13_5885001 chr2L_5885001 D4-c1 134 chr2L 5926265 5926455 chr2L 5926346 5926544 8 85 0.0 0.0 0.0 8.0 279 chr2L 5926265 intron dsf + chr2L 5926404 intron dsf + chr2L 5926544 intron dsf + chr2L_8_5925001 chr2L_5925001 D4-c1 135 chr2L 5931315 5931331 chr2L 5931428 5931444 9 113 3.0 3.0 3.0 2.2 129 chr2L 5931315 intron dsf + chr2L 5931380 intron dsf + chr2L 5931444 intron dsf + chr2L_9_5930001 chr2L_5930001 D4-c1 136 chr2L 5944554 5944580 chr2L 5948995 5949021 10 4441 39.0 23.0 31.0 0.3 4467 chr2L 5944554 intron Gpdh + chr2L 5946788 intron Gpdh + chr2L 5949021 intergenic Gpdh +,CG9044 + chr2L_10_5945001 chr2L_5945001 D4-c1 137 chr2L 5989036 5989061 chr2L 5989113 5989138 12 77 6.0 1.0 3.5 2.7 102 chr2L 5989036 intergenic ifc +,lid - chr2L 5989087 intergenic ifc +,lid - chr2L 5989138 intergenic lid -,ifc + chr2L_12_5985001 chr2L_5985001 D4-c1 138 chr2L 6002436 6002467 chr2L 6002523 6002554 12 87 3.0 2.5 2.8 3.2 118 chr2L 6002436 3` UTR Tsp26A + chr2L 6002495 3` UTR Tsp26A + chr2L 6002554 3` UTR Tsp26A + chr2L_12_6000001 chr2L_6000001 D4-c1 139 chr2L 6050443 6050463 chr2L 6050547 6050568 13 105 4.5 3.0 3.8 2.7 125 chr2L 6050443 intergenic CG12393 +,CG9135 + chr2L 6050506 intergenic CG12393 +,CG9135 + chr2L 6050568 intergenic CG12393 +,CG9135 + chr2L_13_6050001 chr2L_6050001 D4-c1 140 chr2L 6079493 6079529 chr2L 6079576 6079612 19 83 7.5 4.0 5.8 2.8 119 chr2L 6079493 5` UTR CR9162 + chr2L 6079552 5` UTR CR9162 + chr2L 6079612 5` UTR CR9162 + chr2L_19_6075001 chr2L_6075001 D4-c1 141 chr2L 6138739 6138749 chr2L 6138856 6138866 7 117 2.5 2.0 2.2 2.2 127 chr2L 6138739 intergenic CR44824 - chr2L 6138802 intergenic CR44824 - chr2L 6138866 3` UTR CR44824 - chr2L_7_6135001 chr2L_6135001 D4-c1 142 chr2L 6154457 6154488 chr2L 6154534 6154565 12 75 5.0 1.5 3.2 2.9 108 chr2L 6154457 intron CG31639 - chr2L 6154511 intron CG31639 - chr2L 6154565 intron CG31639 - chr2L_12_6150001 chr2L_6150001 D4-c1 143 chr2L 6155365 6155401 chr2L 6155442 6155478 16 76 4.0 2.0 3.0 4.0 113 chr2L 6155365 intergenic CG31639 - chr2L 6155422 intergenic CG31639 - chr2L 6155478 intergenic CG31639 - chr2L_16_6155001 chr2L_6155001 D4-c1 144 chr2L 6185924 6185950 chr2L 6186005 6186031 11 80 2.5 7.0 4.8 1.9 107 chr2L 6185924 intron CG34380 + chr2L 6185978 intron CG34380 + chr2L 6186031 intron CG34380 + chr2L_11_6185001 chr2L_6185001 D4-c1 145 chr2L 6241654 6241689 chr2L 6241733 6241768 17 79 4.0 3.5 3.8 3.5 114 chr2L 6241654 intergenic not near genes chr2L 6241711 intergenic not near genes chr2L 6241768 intergenic not near genes chr2L_17_6240001 chr2L_6240001 D4-c1 146 chr2L 6261600 6261620 chr2L 6261752 6261773 10 153 2.5 5.5 4.0 2.0 173 chr2L 6261600 intron Ddr + chr2L 6261686 intron Ddr + chr2L 6261773 intron Ddr + chr2L_10_6260001 chr2L_6260001 D4-c1 147 chr2L 6279640 6279653 chr2L 6279720 6279733 INE-1 6 80 3.0 2.0 2.5 1.7 93 chr2L 6279640 intron Ddr + chr2L 6279686 intron Ddr + chr2L 6279733 intron Ddr + chr2L_6_6275001 chr2L_6275001 D4-c1 148 chr2L 6283941 6283979 chr2L 6284053 6284091 6 112 1.0 0.5 0.8 3.3 150 chr2L 6283941 intron Ddr + chr2L 6284016 intron Ddr + chr2L 6284091 intron Ddr + chr2L_6_6280001 chr2L_6280001 D4-c1 149 chr2L 6363148 6363175 chr2L 6366075 6366102 Burdock 18 2927 3.5 4.5 4.0 3.6 2954 chr2L 6363148 intergenic not near genes chr2L 6364625 intergenic not near genes chr2L 6366102 intergenic not near genes chr2L_18_6360001 chr2L_6360001 D4-c1 150 chr2L 6426853 6426885 chr2L 6445114 6445146 roo 20 18261 4.5 9.5 7.0 2.5 18293 chr2L 6426853 3` UTR CG9527 - chr2L 6436000 intron CG9527 - chr2L 6445146 exon CG9527 - chr2L_20_6435001 chr2L_6435001 D4-c1 151 chr2L 6463553 6463584 chr2L 6463646 6463677 18 92 7.5 4.0 5.8 2.6 124 chr2L 6463553 exon CG16947 - chr2L 6463615 exon CG16947 - chr2L 6463677 exon CG16947 - chr2L_18_6460001 chr2L_6460001 D4-c1 152 chr2L 6590088 6590116 chr2L 6590167 6590195 11 79 7.5 4.0 5.8 1.6 107 chr2L 6590088 intron CG11319 - chr2L 6590142 intron CG11319 - chr2L 6590195 intron CG11319 - chr2L_11_6590001 chr2L_6590001 D4-c1 153 chr2L 6876778 6876809 chr2L 6882970 6883000 diver 8 6190 5.5 4.5 5.0 1.3 6222 chr2L 6876778 intron Nlg2 + chr2L 6879889 intron Nlg2 + chr2L 6883000 intron Nlg2 + chr2L_8_6875001 chr2L_6875001 D4-c1 154 chr2L 6891449 6891472 chr2L 6891548 6891571 15 99 4.5 4.5 4.5 2.7 122 chr2L 6891449 intron Nlg2 + chr2L 6891510 intron Nlg2 + chr2L 6891571 intron Nlg2 + chr2L_15_6890001 chr2L_6890001 D4-c1 155 chr2L 6969276 6969307 chr2L 6969357 6969388 13 80 4.5 4.5 4.5 2.4 112 chr2L 6969276 3` UTR snRNP-U1-70K - chr2L 6969332 3` UTR snRNP-U1-70K - chr2L 6969388 3` UTR snRNP-U1-70K - chr2L_13_6965001 chr2L_6965001 D4-c1 156 chr2L 7005228 7005254 chr2L 7005325 7005351 11 97 2.0 1.5 1.8 3.9 123 chr2L 7005228 intron uif - chr2L 7005290 intron uif - chr2L 7005351 intron uif - chr2L_11_7005001 chr2L_7005001 D4-c1 157 chr2L 7014658 7014662 chr2L 7014813 7014817 4 155 3.0 4.0 3.5 0.9 159 chr2L 7014658 3` UTR,3` UTR CG43322 +,ade3 - chr2L 7014738 3` UTR ade3 - chr2L 7014817 3` UTR ade3 - chr2L_4_7010001 chr2L_7010001 D4-c1 158 chr2L 7100979 7101015 chr2L 7101206 7101242 17 226 5.5 4.5 5.0 2.8 263 chr2L 7100979 intron Pvf3 - chr2L 7101110 intron Pvf3 - chr2L 7101242 intron Pvf3 - chr2L_17_7100001 chr2L_7100001 D4-c1 159 chr2L 7111754 7111786 chr2L 7111840 7111872 10 86 2.5 0.0 1.2 4.5 118 chr2L 7111754 intron Pvf3 - chr2L 7111813 intron Pvf3 - chr2L 7111872 intron Pvf3 - chr2L_10_7110001 chr2L_7110001 D4-c1 160 chr2L 7162755 7162782 chr2L 7162846 7162873 10 91 2.5 4.5 3.5 2.2 118 chr2L 7162755 intergenic not near genes chr2L 7162814 intergenic not near genes chr2L 7162873 intergenic not near genes chr2L_10_7160001 chr2L_7160001 D4-c1 161 chr2L 7218401 7218423 chr2L 7218480 7218502 12 79 4.0 4.0 4.0 2.4 101 chr2L 7218401 intron CG13784 - chr2L 7218452 intron CG13784 - chr2L 7218502 intron CG13784 - chr2L_12_7215001 chr2L_7215001 D4-c1 162 chr2L 7246553 7246564 chr2L 7247413 7247424 5 860 1.0 4.5 2.8 1.3 871 chr2L 7246553 intron Ndae1 - chr2L 7246988 intron Ndae1 - chr2L 7247424 intron Ndae1 - chr2L_5_7245001 chr2L_7245001 D4-c1 163 chr2L 7268455 7268473 chr2L 7268536 7268554 5 81 0.0 1.5 0.8 2.8 99 chr2L 7268455 intron Wnt4 - chr2L 7268504 intron Wnt4 - chr2L 7268554 intron Wnt4 - chr2L_5_7265001 chr2L_7265001 D4-c1 164 chr2L 7325913 7325946 chr2L 7325999 7326032 12 85 0.5 3.0 1.8 4.3 119 chr2L 7325913 intergenic not near genes chr2L 7325972 intergenic not near genes chr2L 7326032 intergenic not near genes chr2L_12_7325001 chr2L_7325001 D4-c1 165 chr2L 7331679 7331690 chr2L 7331776 7331787 6 97 7.0 3.5 5.2 1.0 108 chr2L 7331679 intergenic not near genes chr2L 7331733 intergenic not near genes chr2L 7331787 intergenic not near genes chr2L_6_7330001 chr2L_7330001 D4-c1 166 chr2L 7343324 7343359 chr2L 7350441 7350476 roo 12 7117 4.0 6.5 5.2 1.9 7152 chr2L 7343324 intron Wnt6 + chr2L 7346900 intron Wnt6 + chr2L 7350476 intron Wnt6 + chr2L_12_7345001 chr2L_7345001 D4-c1 167 chr2L 7358298 7358323 chr2L 7358378 7358403 13 80 7.0 4.0 5.5 2.0 105 chr2L 7358298 intergenic not near genes chr2L 7358350 intergenic not near genes chr2L 7358403 intergenic not near genes chr2L_13_7355001 chr2L_7355001 D4-c1 168 chr2L 7406948 7406959 chr2L 7407056 7407067 4 108 0.0 0.0 0.0 4.0 119 chr2L 7406948 intron CG5177 + chr2L 7407008 intron CG5177 + chr2L 7407067 intron CG5177 + chr2L_4_7405001 chr2L_7405001 D4-c1 169 chr2L 7410618 7410650 chr2L 7410855 7410887 15 237 5.0 2.0 3.5 3.3 269 chr2L 7410618 intergenic CG15818 + chr2L 7410752 intergenic CG15818 + chr2L 7410887 intergenic CG15818 + chr2L_15_7410001 chr2L_7410001 D4-c1 170 chr2L 7502735 7502770 chr2L 7502812 7502847 23 77 5.0 6.5 5.8 3.4 112 chr2L 7502735 intron RapGAP1 - chr2L 7502791 intron RapGAP1 - chr2L 7502847 intron RapGAP1 - chr2L_23_7500001 chr2L_7500001 D4-c1 171 chr2L 7572461 7572495 chr2L 7572612 7572646 25 151 4.5 3.0 3.8 5.2 185 chr2L 7572461 intron RapGAP1 - chr2L 7572554 intron RapGAP1 - chr2L 7572646 intron RapGAP1 - chr2L_25_7570001 chr2L_7570001 D4-c1 172 chr2L 7609529 7609751 chr2L 7609625 7609829 26 84 2.5 3.0 2.8 6.8 300 chr2L 7609529 intron CG6739 + chr2L 7609679 intron CG6739 + chr2L 7609829 intron CG6739 + chr2L_26_7605001 chr2L_7605001 D4-c1 173 chr2L 7625189 7625192 chr2L 7625288 7625291 4 99 5.5 10.0 7.8 0.5 102 chr2L 7625189 intergenic not near genes chr2L 7625240 intergenic not near genes chr2L 7625291 intergenic not near genes chr2L_4_7625001 chr2L_7625001 D4-c1 174 chr2L 7775642 7775657 chr2L 7775735 7775750 6 93 6.0 3.5 4.8 1.0 108 chr2L 7775642 intergenic CG7179 - chr2L 7775696 intergenic CG7179 - chr2L 7775750 intergenic CG7179 - chr2L_6_7775001 chr2L_7775001 D4-c1 175 chr2L 7775660 7775664 chr2L 7775732 7775757 4 88 4.0 3.0 3.5 0.9 97 chr2L 7775660 intergenic CG7179 - chr2L 7775708 intergenic CG7179 - chr2L 7775757 intergenic CG7179 - chr2L_4_7775001 chr2L_7775001 D4-c1 176 chr2L 7781250 7781259 chr2L 7781350 7781359 6 100 11.5 6.0 8.8 0.6 109 chr2L 7781250 3` UTR Uro + chr2L 7781304 3` UTR Uro + chr2L 7781359 3` UTR Uro + chr2L_6_7780001 chr2L_7780001 D4-c1 177 chr2L 7867572 7867601 chr2L 7867667 7867696 13 95 4.5 6.0 5.2 2.1 124 chr2L 7867572 intron Proc - chr2L 7867634 intron Proc - chr2L 7867696 intron Proc - chr2L_13_7865001 chr2L_7865001 D4-c1 178 chr2L 7905870 7905876 chr2L 7905978 7905984 6 108 4.0 13.0 8.5 0.6 114 chr2L 7905870 intron Snoo - chr2L 7905927 intron Snoo - chr2L 7905984 intron Snoo - chr2L_6_7905001 chr2L_7905001 D4-c1 179 chr2L 7959040 7959069 chr2L 7960452 7960475 pogo 13 1411 7.5 0.5 4.0 2.6 1435 chr2L 7959040 intron Snoo - chr2L 7959758 intron Snoo - chr2L 7960475 intron Snoo - chr2L_13_7955001 chr2L_7955001 D4-c1 180 chr2L 7977092 7977109 chr2L 7984068 7984085 297 5 6976 6.0 9.5 7.8 0.6 6993 chr2L 7977092 intron Snoo - chr2L 7980588 intron Snoo - chr2L 7984085 intron,5` UTR Snoo -,CG7231 + chr2L_5_7980001 chr2L_7980001 D4-c1 181 chr2L 8013612 8013633 chr2L 8018817 8018838 copia 17 5205 6.5 0.0 3.2 4.0 5226 chr2L 8013612 intron Tg + chr2L 8016225 intron Tg + chr2L 8018838 intron Tg + chr2L_17_8015001 chr2L_8015001 D4-c1 182 chr2L 8018823 8018837 chr2L 8023608 8023622 Doc 6 4785 0.0 12.0 6.0 0.9 4799 chr2L 8018823 intron Tg + chr2L 8021222 intron Tg + chr2L 8023622 intron Tg + chr2L_6_8020001 chr2L_8020001 D4-c1 183 chr2L 8044100 8044130 chr2L 8044179 8044210 20 80 3.5 9.0 6.2 2.8 110 chr2L 8044100 intron CG7466 + chr2L 8044155 intron CG7466 + chr2L 8044210 intron CG7466 + chr2L_20_8040001 chr2L_8040001 D4-c1 184 chr2L 8167144 8167181 chr2L 8167236 8167273 16 92 3.0 7.0 5.0 2.7 129 chr2L 8167144 intron Piezo + chr2L 8167208 intron Piezo + chr2L 8167273 intron Piezo + chr2L_16_8165001 chr2L_8165001 D4-c1 185 chr2L 8231935 8231939 chr2L 8232020 8232024 4 85 9.0 0.5 4.8 0.7 89 chr2L 8231935 intron Pvr - chr2L 8231980 intron Pvr - chr2L 8232024 intron Pvr - chr2L_4_8230001 chr2L_8230001 D4-c1 186 chr2L 8244730 8244749 chr2L 8244853 8244872 11 123 1.5 5.0 3.2 2.6 142 chr2L 8244730 intron CG8086 - chr2L 8244801 intron CG8086 - chr2L 8244872 intron CG8086 - chr2L_11_8240001 chr2L_8240001 D4-c1 187 chr2L 8323699 8323730 chr2L 8323800 8323831 15 101 4.0 8.0 6.0 2.1 132 chr2L 8323699 intron CG7781 - chr2L 8323765 intron CG7781 - chr2L 8323831 intron CG7781 - chr2L_15_8320001 chr2L_8320001 D4-c1 188 chr2L 8336937 8336968 chr2L 8337017 8337048 8 80 0.0 5.5 2.8 2.1 111 chr2L 8336937 intergenic not near genes chr2L 8336992 intergenic not near genes chr2L 8337048 intergenic not near genes chr2L_8_8335001 chr2L_8335001 D4-c1 189 chr2L 7545158 7545180 chr2L 8354956 8354978 6 809798 33.5 33.0 33.2 0.2 809820 chr2L 7545158 intron RapGAP1 - chr2L 7950068 intron Snoo - chr2L 8354978 exon Mur29B + chr2L_6_7950001 chr2L_7950001 D4-c1 190 chr2L 8452425 8452448 chr2L 8461597 8461620 roo 12 9172 5.0 9.0 7.0 1.5 9195 chr2L 8452425 intron fu12 - chr2L 8457022 intron fu12 - chr2L 8461620 intron fu12 - chr2L_12_8455001 chr2L_8455001 D4-c1 191 chr2L 8484411 8484446 chr2L 8484671 8484706 16 258 4.0 2.0 3.0 4.0 295 chr2L 8484411 intron d + chr2L 8484558 intron d + chr2L 8484706 intron d + chr2L_16_8480001 chr2L_8480001 D4-c1 192 chr2L 8498206 8498239 chr2L 8498288 8498321 9 82 3.0 3.0 3.0 2.2 115 chr2L 8498206 intron Dh31 - chr2L 8498264 intron Dh31 - chr2L 8498321 intron Dh31 - chr2L_9_8495001 chr2L_8495001 D4-c1 193 chr2L 8538162 8538178 chr2L 8538239 8538255 9 77 7.0 0.0 3.5 2.0 93 chr2L 8538162 intron CG17834 + chr2L 8538208 intron CG17834 + chr2L 8538255 intron CG17834 + chr2L_9_8535001 chr2L_8535001 D4-c1 194 chr2L 8553469 8553492 chr2L 8553617 8553640 15 148 4.0 7.5 5.8 2.2 171 chr2L 8553469 intron Sema-1a + chr2L 8553554 intron Sema-1a + chr2L 8553640 intron Sema-1a + chr2L_15_8550001 chr2L_8550001 D4-c1 195 chr2L 8578452 8578452 chr2L 16071771 16071771 6 7493319 19.5 31.5 25.5 0.2 7493319 chr2L 8578452 intron Sema-1a + chr2L 12325112 intergenic not near genes chr2L 16071771 intron beat-Ia + chr2L_6_12325001 chr2L_12325001 D4-c1 196 chr2L 8594462 8594494 chr2L 8601517 8601549 297 11 7055 7.0 3.0 5.0 1.8 7087 chr2L 8594462 intron,3` UTR Sema-1a +,CR43855 - chr2L 8598006 intron Sema-1a + chr2L 8601549 intron Sema-1a + chr2L_11_8595001 chr2L_8595001 D4-c1 197 chr2L 8629004 8629292 chr2L 8629087 8629371 11 79 5.0 23.0 14.0 0.7 367 chr2L 8629004 intron Sema-1a + chr2L 8629188 intron Sema-1a + chr2L 8629371 intron Sema-1a + chr2L_11_8625001 chr2L_8625001 D4-c1 198 chr2L 8679005 8679009 chr2L 8679110 8679114 4 105 3.0 0.0 1.5 1.6 109 chr2L 8679005 intron CG9287 - chr2L 8679060 intron CG9287 - chr2L 8679114 intron CG9287 - chr2L_4_8675001 chr2L_8675001 D4-c1 199 chr2L 8723115 8723148 chr2L 8731493 8731526 Tirant 18 8378 5.5 5.5 5.5 2.8 8411 chr2L 8723115 intron raw - chr2L 8727320 intron raw - chr2L 8731526 intron raw - chr2L_18_8725001 chr2L_8725001 D4-c1 200 chr2L 8784705 8784726 chr2L 8784817 8784838 8 112 6.0 2.0 4.0 1.6 133 chr2L 8784705 intergenic not near genes chr2L 8784772 intergenic not near genes chr2L 8784838 intergenic not near genes chr2L_8_8780001 chr2L_8780001 D4-c1 201 chr2L 8786554 8786578 chr2L 8786641 8786666 8 87 0.5 7.5 4.0 1.6 112 chr2L 8786554 intergenic not near genes chr2L 8786610 intergenic not near genes chr2L 8786666 intergenic not near genes chr2L_8_8785001 chr2L_8785001 D4-c1 202 chr2L 8788752 8788789 chr2L 8788844 8788881 17 92 1.0 1.0 1.0 8.5 129 chr2L 8788752 intergenic not near genes chr2L 8788816 intergenic not near genes chr2L 8788881 intergenic not near genes chr2L_17_8785001 chr2L_8785001 D4-c1 203 chr2L 8799801 8799829 chr2L 8799918 8799945 19 115 4.0 8.0 6.0 2.7 144 chr2L 8799801 intergenic not near genes chr2L 8799873 intergenic not near genes chr2L 8799945 intergenic not near genes chr2L_19_8795001 chr2L_8795001 D4-c1 204 chr2L 8902449 8902486 chr2L 8902597 8902616 9 146 4.0 7.0 5.5 1.4 167 chr2L 8902449 intron CG34398 + chr2L 8902532 intron CG34398 + chr2L 8902616 intron CG34398 + chr2L_9_8900001 chr2L_8900001 D4-c1 205 chr2L 8910721 8910743 chr2L 8910813 8910833 12 92 4.0 2.0 3.0 3.0 112 chr2L 8910721 intron CG34398 + chr2L 8910777 intron CG34398 + chr2L 8910833 intron CG34398 + chr2L_12_8910001 chr2L_8910001 D4-c1 206 chr2L 8946705 8946739 chr2L 8946815 8946849 16 110 2.0 6.5 4.2 3.1 144 chr2L 8946705 intron C1GalTA - chr2L 8946777 intron C1GalTA - chr2L 8946849 intron C1GalTA - chr2L_16_8945001 chr2L_8945001 D4-c1 207 chr2L 8956228 8956244 chr2L 8956306 8956322 5 78 0.5 0.0 0.2 4.2 94 chr2L 8956228 intron CG31886 - chr2L 8956275 intron CG31886 - chr2L 8956322 intron CG31886 - chr2L_5_8955001 chr2L_8955001 D4-c1 208 chr2L 8980459 8980476 chr2L 8980549 8980566 9 90 4.5 0.0 2.2 2.8 107 chr2L 8980459 intron CG13101 - chr2L 8980512 intron CG13101 - chr2L 8980566 intron CG13101 - chr2L_9_8980001 chr2L_8980001 D4-c1 209 chr2L 9000280 9000312 chr2L 9007791 9007823 roo 14 7511 7.5 1.0 4.2 2.7 7543 chr2L 9000280 intergenic Try29F + chr2L 9004052 intergenic not near genes chr2L 9007823 intergenic not near genes chr2L_14_9000001 chr2L_9000001 D4-c1 210 chr2L 9025816 9025849 chr2L 9025901 9025934 15 84 4.5 2.5 3.5 3.3 118 chr2L 9025816 intron,3` UTR CG9582 -,CR44352 - chr2L 9025875 intron,3` UTR CG9582 -,CR44352 - chr2L 9025934 intron,3` UTR CG9582 -,CR44352 - chr2L_15_9025001 chr2L_9025001 D4-c1 211 chr2L 9053406 9053430 chr2L 9053642 9053666 7 236 2.0 1.0 1.5 2.8 260 chr2L 9053406 exon CG31708 - chr2L 9053536 intron CG31708 - chr2L 9053666 intron CG31708 - chr2L_7_9050001 chr2L_9050001 D4-c1 212 chr2L 9084336 9084340 chr2L 16217660 16217660 27 7133321 26.0 17.0 21.5 1.2 7133324 chr2L 9084336 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_27_12650001 chr2L_12650001 D4-c1 213 chr2L 9113801 9113810 chr2L 9113912 9113921 5 111 3.0 0.0 1.5 2.0 120 chr2L 9113801 intergenic not near genes chr2L 9113861 intergenic not near genes chr2L 9113921 intergenic not near genes chr2L_5_9110001 chr2L_9110001 D4-c1 214 chr2L 9217969 9217999 chr2L 9222757 9222787 Doc 16 4787 6.5 6.5 6.5 2.1 4818 chr2L 9217969 intron tai + chr2L 9220378 intron tai + chr2L 9222787 intron tai + chr2L_16_9220001 chr2L_9220001 D4-c1 215 chr2L 9251143 9251171 chr2L 9251241 9251269 16 97 5.0 4.5 4.8 2.8 126 chr2L 9251143 intergenic aust -,borr - chr2L 9251206 intergenic aust -,borr - chr2L 9251269 intergenic borr -,aust - chr2L_16_9250001 chr2L_9250001 D4-c1 216 chr2L 9262109 9262143 chr2L 9262215 9262249 17 106 2.0 4.0 3.0 4.2 140 chr2L 9262109 intron,3` UTR Ggamma30A +,CR45262 - chr2L 9262179 intron,3` UTR Ggamma30A +,CR45262 - chr2L 9262249 intron,intron Ggamma30A +,CR45262 - chr2L_17_9260001 chr2L_9260001 D4-c1 217 chr2L 9290787 9290796 chr2L 9290865 9290874 4 78 0.5 5.0 2.8 1.1 87 chr2L 9290787 intron Ggamma30A + chr2L 9290830 intron Ggamma30A + chr2L 9290874 intron Ggamma30A + chr2L_4_9290001 chr2L_9290001 D4-c1 218 chr2L 9297377 9297405 chr2L 9297455 9297483 15 78 4.0 6.5 5.2 2.4 106 chr2L 9297377 3` UTR Ggamma30A + chr2L 9297430 3` UTR Ggamma30A + chr2L 9297483 3` UTR Ggamma30A + chr2L_15_9295001 chr2L_9295001 D4-c1 219 chr2L 9380245 9380252 chr2L 9380341 9380348 5 96 8.5 4.0 6.2 0.7 103 chr2L 9380245 exon Shawl - chr2L 9380296 intron Shawl - chr2L 9380348 intron Shawl - chr2L_5_9380001 chr2L_9380001 D4-c1 220 chr2L 9387248 9387273 chr2L 9387347 9387372 5 99 3.0 1.0 2.0 1.7 124 chr2L 9387248 intron Shawl - chr2L 9387310 intron Shawl - chr2L 9387372 intron Shawl - chr2L_5_9385001 chr2L_9385001 D4-c1 221 chr2L 9396718 9396744 chr2L 9401148 9401173 4 4430 29.5 9.0 19.2 0.2 4455 chr2L 9396718 intron Shawl - chr2L 9398946 intron Shawl - chr2L 9401173 intron Shawl - chr2L_4_9395001 chr2L_9395001 D4-c1 222 chr2L 9448904 9448928 chr2L 9448992 9449016 6 88 0.0 3.0 1.5 2.4 112 chr2L 9448904 intron numb + chr2L 9448960 intron numb + chr2L 9449016 intron numb + chr2L_6_9445001 chr2L_9445001 D4-c1 223 chr2L 9454976 9455001 chr2L 9455079 9455104 10 103 7.0 6.0 6.5 1.3 128 chr2L 9454976 intron numb + chr2L 9455040 intron numb + chr2L 9455104 intron numb + chr2L_10_9455001 chr2L_9455001 D4-c1 224 chr2L 9456934 9456960 chr2L 9457016 9457042 17 82 2.5 6.0 4.2 3.3 108 chr2L 9456934 intron numb + chr2L 9456988 intron numb + chr2L 9457042 intron numb + chr2L_17_9455001 chr2L_9455001 D4-c1 225 chr2L 9493248 9493275 chr2L 9493333 9493354 12 83 3.5 4.0 3.8 2.5 106 chr2L 9493248 intron Gdi - chr2L 9493301 intron Gdi - chr2L 9493354 intron Gdi - chr2L_12_9490001 chr2L_9490001 D4-c1 226 chr2L 9619500 9619511 chr2L 9619838 9619849 5 338 0.5 5.0 2.8 1.3 349 chr2L 9619500 intron GlcAT-S + chr2L 9619674 intron GlcAT-S + chr2L 9619849 intron GlcAT-S + chr2L_5_9615001 chr2L_9615001 D4-c1 227 chr2L 9664905 9664941 chr2L 9665001 9665037 23 96 7.0 3.5 5.2 3.7 132 chr2L 9664905 intergenic not near genes chr2L 9664971 intergenic not near genes chr2L 9665037 intergenic not near genes chr2L_23_9660001 chr2L_9660001 D4-c1 228 chr2L 9730975 9731006 chr2L 9731059 9731090 17 84 3.0 5.5 4.2 3.3 115 chr2L 9730975 intron Nckx30C - chr2L 9731032 intron Nckx30C - chr2L 9731090 intron Nckx30C - chr2L_17_9730001 chr2L_9730001 D4-c1 229 chr2L 9767902 9767938 chr2L 9767982 9768018 14 80 1.0 8.0 4.5 2.5 116 chr2L 9767902 intron,exon ppk18 -,CG4017 + chr2L 9767960 intron,exon ppk18 -,CG4017 + chr2L 9768018 intron,exon ppk18 -,CG4017 + chr2L_14_9765001 chr2L_9765001 D4-c1 230 chr2L 9775981 9776013 chr2L 9776064 9776096 13 83 2.5 1.0 1.8 4.6 115 chr2L 9775981 intergenic not near genes chr2L 9776038 intergenic not near genes chr2L 9776096 intergenic not near genes chr2L_13_9775001 chr2L_9775001 D4-c1 231 chr2L 9837431 9837443 chr2L 9837510 9837522 11 79 2.0 2.5 2.2 3.4 91 chr2L 9837431 intron nAChRalpha6 - chr2L 9837476 intron nAChRalpha6 - chr2L 9837522 intron nAChRalpha6 - chr2L_11_9835001 chr2L_9835001 D4-c1 232 chr2L 9873759 9873794 chr2L 9873856 9873891 15 97 4.0 2.5 3.2 3.6 132 chr2L 9873759 intron nAChRalpha6 - chr2L 9873825 intron nAChRalpha6 - chr2L 9873891 intron nAChRalpha6 - chr2L_15_9870001 chr2L_9870001 D4-c1 233 chr2L 9973729 9973759 chr2L 9980843 9980879 HMS-Beagle 13 7119 4.0 5.5 4.8 2.2 7150 chr2L 9973729 intergenic not near genes chr2L 9977304 intergenic not near genes chr2L 9980879 intergenic not near genes chr2L_13_9975001 chr2L_9975001 D4-c1 234 chr2L 10051725 10051753 chr2L 10051811 10051839 20 85 6.5 6.5 6.5 2.7 114 chr2L 10051725 5` UTR CR44874 + chr2L 10051782 5` UTR CR44874 + chr2L 10051839 5` UTR CR44874 + chr2L_20_10050001 chr2L_10050001 D4-c1 235 chr2L 10119256 10119263 chr2L 10119566 10119573 5 310 3.5 8.0 5.8 0.7 317 chr2L 10119256 intron,intron CG44153 -,CG34109 + chr2L 10119414 intron,intron CG44153 -,CG34109 + chr2L 10119573 intron,intron CG44153 -,CG34109 + chr2L_5_10115001 chr2L_10115001 D4-c1 236 chr2L 10153200 10153238 chr2L 10153280 10153318 17 80 3.5 4.0 3.8 3.5 118 chr2L 10153200 intron,exon CG44153 -,CG4839 + chr2L 10153259 intron,intron CG44153 -,CG4839 + chr2L 10153318 intron,intron CG44153 -,CG4839 + chr2L_17_10150001 chr2L_10150001 D4-c1 237 chr2L 10156324 10156347 chr2L 10163795 10163818 blood 11 7471 5.5 5.0 5.2 1.8 7494 chr2L 10156324 intron,3` UTR CG44153 -,CG4839 + chr2L 10160071 intron CG44153 - chr2L 10163818 intron CG44153 - chr2L_11_10160001 chr2L_10160001 D4-c1 238 chr2L 10209860 10209862 chr2L 10209938 10209940 4 78 0.5 0.0 0.2 3.3 80 chr2L 10209860 3` UTR CG5727 - chr2L 10209900 3` UTR CG5727 - chr2L 10209940 3` UTR CG5727 - chr2L_4_10205001 chr2L_10205001 D4-c1 239 chr2L 10395476 10395510 chr2L 10395557 10395589 6 81 4.5 3.0 3.8 1.2 113 chr2L 10395476 intron Mdh1 - chr2L 10395532 intron Mdh1 - chr2L 10395589 intron Mdh1 - chr2L_6_10395001 chr2L_10395001 D4-c1 240 chr2L 10421309 10421322 chr2L 10421387 10421389 6 80 5.5 2.0 3.8 1.2 80 chr2L 10421309 exon pie - chr2L 10421349 exon pie - chr2L 10421389 exon pie - chr2L_6_10420001 chr2L_10420001 D4-c1 241 chr2L 10474381 10474410 chr2L 10474463 10474492 13 81 3.0 2.5 2.8 3.4 111 chr2L 10474381 intergenic RluA-1 - chr2L 10474436 intergenic RluA-1 - chr2L 10474492 intergenic RluA-1 - chr2L_13_10470001 chr2L_10470001 D4-c1 242 chr2L 10495303 10495317 chr2L 10495381 10495395 5 78 6.0 4.5 5.2 0.8 92 chr2L 10495303 intron Myo31DF - chr2L 10495349 intron Myo31DF - chr2L 10495395 intron Myo31DF - chr2L_5_10495001 chr2L_10495001 D4-c1 243 chr2L 10515358 10515383 chr2L 10515452 10515476 10 94 5.5 2.5 4.0 2.0 118 chr2L 10515358 intron,intron CG45083 -,Fatp - chr2L 10515417 intron,intron CG45083 -,Fatp - chr2L 10515476 intron,intron CG45083 -,Fatp - chr2L_10_10515001 chr2L_10515001 D4-c1 244 chr2L 10531609 10531628 chr2L 10531702 10531721 4 93 0.0 3.5 1.8 1.4 112 chr2L 10531609 3` UTR Lip4 + chr2L 10531665 3` UTR Lip4 + chr2L 10531721 3` UTR Lip4 + chr2L_4_10530001 chr2L_10530001 D4-c1 245 chr2L 10563910 10563946 chr2L 10564004 10564039 6 91 1.0 2.5 1.8 2.1 129 chr2L 10563910 intron Trim9 + chr2L 10563974 intron Trim9 + chr2L 10564039 intron Trim9 + chr2L_6_10560001 chr2L_10560001 D4-c1 246 chr2L 10580789 10580823 chr2L 10580871 10580905 9 81 4.5 5.0 4.8 1.6 116 chr2L 10580789 intron Trim9 + chr2L 10580847 intron Trim9 + chr2L 10580905 intron Trim9 + chr2L_9_10580001 chr2L_10580001 D4-c1 247 chr2L 10592840 10592871 chr2L 10600503 10600505 opus 11 7660 3.0 2.5 2.8 2.9 7665 chr2L 10592840 intron Trim9 + chr2L 10596672 intron Trim9 + chr2L 10600505 intron Trim9 + chr2L_11_10595001 chr2L_10595001 D4-c1 248 chr2L 10640641 10640670 chr2L 10640731 10640760 20 90 5.0 4.0 4.5 3.6 119 chr2L 10640641 exon CG31872 + chr2L 10640700 exon CG31872 + chr2L 10640760 exon CG31872 + chr2L_20_10640001 chr2L_10640001 D4-c1 249 chr2L 10673740 10673770 chr2L 10673823 10673853 13 83 2.0 3.5 2.8 3.4 113 chr2L 10673740 intergenic not near genes chr2L 10673796 intergenic not near genes chr2L 10673853 intergenic not near genes chr2L_13_10670001 chr2L_10670001 D4-c1 250 chr2L 10688546 10688573 chr2L 10688623 10688650 7 77 0.5 0.0 0.2 5.8 104 chr2L 10688546 intergenic CG7294 - chr2L 10688598 intergenic CG7294 - chr2L 10688650 intergenic CG7294 - chr2L_7_10685001 chr2L_10685001 D4-c1 251 chr2L 10690430 10690441 chr2L 10690991 10691002 6 561 0.0 4.0 2.0 2.0 572 chr2L 10690430 intergenic not near genes chr2L 10690716 intergenic not near genes chr2L 10691002 intergenic not near genes chr2L_6_10690001 chr2L_10690001 D4-c1 252 chr2L 10701712 10701742 chr2L 10701793 10701823 9 81 4.0 3.5 3.8 1.9 111 chr2L 10701712 intergenic Lip1 -,Lip2 - chr2L 10701768 intergenic Lip2 -,Lip1 - chr2L 10701823 intergenic Lip2 -,Lip1 - chr2L_9_10700001 chr2L_10700001 D4-c1 253 chr2L 10862840 10862853 chr2L 10864455 10864468 Rt1c 9 1615 2.5 6.5 4.5 1.6 1628 chr2L 10862840 3` UTR CR43807 - chr2L 10863654 intron CR43807 - chr2L 10864468 3` UTR CR43807 - chr2L_9_10860001 chr2L_10860001 D4-c1 254 chr2L 10862854 10862876 chr2L 10864454 10864491 Rt1c 11 1612 2.0 6.5 4.2 2.1 1637 chr2L 10862854 3` UTR CR43807 - chr2L 10863672 intron CR43807 - chr2L 10864491 3` UTR CR43807 - chr2L_11_10860001 chr2L_10860001 D4-c1 255 chr2L 10914801 10914835 chr2L 10914891 10914927 10 89 4.5 1.0 2.8 2.6 126 chr2L 10914801 intergenic not near genes chr2L 10914864 intergenic not near genes chr2L 10914927 intergenic not near genes chr2L_10_10910001 chr2L_10910001 D4-c1 256 chr2L 10945073 10945092 chr2L 10945333 10945348 9 260 5.0 4.0 4.5 1.6 275 chr2L 10945073 intron dpr2 - chr2L 10945210 intron dpr2 - chr2L 10945348 intron dpr2 - chr2L_9_10945001 chr2L_10945001 D4-c1 257 chr2L 10946950 10946973 chr2L 10956166 10956189 roo 18 9216 8.0 8.5 8.2 2.0 9239 chr2L 10946950 intron dpr2 - chr2L 10951570 intron dpr2 - chr2L 10956189 intron dpr2 - chr2L_18_10950001 chr2L_10950001 D4-c1 258 chr2L 11055070 11055075 chr2L 11055156 11055161 4 86 3.0 4.5 3.8 0.8 91 chr2L 11055070 intron Samuel - chr2L 11055116 intron Samuel - chr2L 11055161 intron Samuel - chr2L_4_11055001 chr2L_11055001 D4-c1 259 chr2L 11167474 11167511 chr2L 11167566 11167603 17 91 5.5 5.0 5.2 2.7 129 chr2L 11167474 intron Ca-beta - chr2L 11167538 intron Ca-beta - chr2L 11167603 intron Ca-beta - chr2L_17_11165001 chr2L_11165001 D4-c1 260 chr2L 11174650 11174660 chr2L 11174720 11174738 5 74 2.0 8.0 5.0 0.8 88 chr2L 11174650 intron Ca-beta - chr2L 11174694 intron Ca-beta - chr2L 11174738 intron Ca-beta - chr2L_5_11170001 chr2L_11170001 D4-c1 261 chr2L 11224054 11224090 chr2L 11224166 11224202 15 112 4.0 2.0 3.0 3.8 148 chr2L 11224054 intron ab + chr2L 11224128 intron ab + chr2L 11224202 intron ab + chr2L_15_11220001 chr2L_11220001 D4-c1 262 chr2L 11228200 11228206 chr2L 11228278 11228284 6 78 5.5 9.0 7.2 0.7 84 chr2L 11228200 intron ab + chr2L 11228242 intron ab + chr2L 11228284 intron ab + chr2L_6_11225001 chr2L_11225001 D4-c1 263 chr2L 11248568 11248591 chr2L 11248652 11248660 14 81 10.0 5.0 7.5 1.6 92 chr2L 11248568 intron ab + chr2L 11248614 intron ab + chr2L 11248660 intron ab + chr2L_14_11245001 chr2L_11245001 D4-c1 264 chr2L 11296012 11296020 chr2L 11296204 11296212 8 192 4.0 0.0 2.0 2.7 200 chr2L 11296012 intergenic not near genes chr2L 11296112 intergenic not near genes chr2L 11296212 intergenic not near genes chr2L_8_11295001 chr2L_11295001 D4-c1 265 chr2L 11315267 11315269 chr2L 11317672 11317674 G2 4 2405 4.5 2.5 3.5 0.9 2407 chr2L 11315267 intergenic not near genes chr2L 11316470 intergenic not near genes chr2L 11317674 intergenic not near genes chr2L_4_11315001 chr2L_11315001 D4-c1 266 chr2L 11378578 11378615 chr2L 11378674 11378711 15 95 2.5 2.5 2.5 4.3 133 chr2L 11378578 intergenic not near genes chr2L 11378644 intergenic not near genes chr2L 11378711 intergenic not near genes chr2L_15_11375001 chr2L_11375001 D4-c1 267 chr2L 11379946 11379951 chr2L 11380029 11380032 4 82 9.5 0.0 4.8 0.7 86 chr2L 11379946 intergenic not near genes chr2L 11379989 intergenic not near genes chr2L 11380032 intergenic not near genes chr2L_4_11375001 chr2L_11375001 D4-c1 268 chr2L 11380609 11380874 chr2L 11380687 11380978 26 87 0.0 1.5 0.8 14.4 369 chr2L 11380609 intergenic not near genes chr2L 11380794 intergenic not near genes chr2L 11380978 intergenic not near genes chr2L_26_11380001 chr2L_11380001 D4-c1 269 chr2L 11450124 11450155 chr2L 11450211 11450238 6 84 0.0 4.0 2.0 2.0 114 chr2L 11450124 intergenic not near genes chr2L 11450181 intergenic not near genes chr2L 11450238 intergenic not near genes chr2L_6_11450001 chr2L_11450001 D4-c1 270 chr2L 11458942 11458974 chr2L 11459059 11459091 10 117 0.5 2.0 1.2 4.5 149 chr2L 11458942 intergenic not near genes chr2L 11459016 intergenic not near genes chr2L 11459091 intergenic not near genes chr2L_10_11455001 chr2L_11455001 D4-c1 271 chr2L 11476280 11476289 chr2L 11476361 11476370 5 81 0.0 8.5 4.2 1.0 90 chr2L 11476280 intergenic not near genes chr2L 11476325 intergenic not near genes chr2L 11476370 intergenic not near genes chr2L_5_11475001 chr2L_11475001 D4-c1 272 chr2L 11491125 11491159 chr2L 11491207 11491241 12 82 0.5 2.0 1.2 5.5 116 chr2L 11491125 intergenic not near genes chr2L 11491183 intergenic not near genes chr2L 11491241 intergenic not near genes chr2L_12_11490001 chr2L_11490001 D4-c1 273 chr2L 11537754 11537786 chr2L 11537872 11537904 10 117 6.0 5.5 5.8 1.5 150 chr2L 11537754 intergenic not near genes chr2L 11537829 intergenic not near genes chr2L 11537904 intergenic not near genes chr2L_10_11535001 chr2L_11535001 D4-c1 274 chr2L 11540583 11540616 chr2L 11547986 11548019 Tabor 10 7403 7.0 5.5 6.2 1.4 7436 chr2L 11540583 intergenic not near genes chr2L 11544301 intergenic not near genes chr2L 11548019 intergenic not near genes chr2L_10_11540001 chr2L_11540001 D4-c1 275 chr2L 11563636 11563668 chr2L 11568841 11568873 copia 15 5204 3.5 4.0 3.8 3.1 5237 chr2L 11563636 intergenic not near genes chr2L 11566254 intergenic not near genes chr2L 11568873 intergenic not near genes chr2L_15_11565001 chr2L_11565001 D4-c1 276 chr2L 11614060 11614083 chr2L 11615547 11615579 hopper2 4 1492 3.5 1.0 2.2 1.2 1519 chr2L 11614060 intron kek2 + chr2L 11614820 intron kek2 + chr2L 11615579 intron kek2 + chr2L_4_11610001 chr2L_11610001 D4-c1 277 chr2L 11627476 11627486 chr2L 11628230 11628240 5 754 0.0 0.0 0.0 5.0 764 chr2L 11627476 intergenic not near genes chr2L 11627858 intergenic not near genes chr2L 11628240 intergenic not near genes chr2L_5_11625001 chr2L_11625001 D4-c1 278 chr2L 11657972 11658005 chr2L 11658058 11658091 15 86 7.5 3.5 5.5 2.3 119 chr2L 11657972 3` UTR CG43167 + chr2L 11658032 intergenic CG43167 + chr2L 11658091 intergenic CG43167 + chr2L_15_11655001 chr2L_11655001 D4-c1 279 chr2L 11684549 11684579 chr2L 11684627 11684646 13 77 8.5 8.5 8.5 1.4 97 chr2L 11684549 intergenic not near genes chr2L 11684598 intergenic not near genes chr2L 11684646 intergenic not near genes chr2L_13_11680001 chr2L_11680001 D4-c1 280 chr2L 11713505 11713538 chr2L 11720974 11721007 blood 22 7469 6.5 2.5 4.5 4.0 7502 chr2L 11713505 intergenic not near genes chr2L 11717256 intergenic not near genes chr2L 11721007 intergenic CR44143 + chr2L_22_11715001 chr2L_11715001 D4-c1 281 chr2L 11750325 11750342 chr2L 11750612 11750629 9 287 6.0 3.5 4.8 1.6 304 chr2L 11750325 intergenic not near genes chr2L 11750477 intergenic not near genes chr2L 11750629 intergenic not near genes chr2L_9_11750001 chr2L_11750001 D4-c1 282 chr2L 11820430 11820464 chr2L 11820512 11820546 17 82 2.5 4.0 3.2 4.0 116 chr2L 11820430 intron Pde1c - chr2L 11820488 intron Pde1c - chr2L 11820546 intron Pde1c - chr2L_17_11820001 chr2L_11820001 D4-c1 283 chr2L 11825706 11825711 chr2L 11825786 11825791 4 80 5.5 0.0 2.8 1.1 85 chr2L 11825706 intron Pde1c - chr2L 11825748 intron Pde1c - chr2L 11825791 intron Pde1c - chr2L_4_11825001 chr2L_11825001 D4-c1 284 chr2L 11838280 11838318 chr2L 11838364 11838402 11 84 4.0 0.0 2.0 3.7 122 chr2L 11838280 intron Pde1c - chr2L 11838341 intron Pde1c - chr2L 11838402 intron Pde1c - chr2L_11_11835001 chr2L_11835001 D4-c1 285 chr2L 11841350 11841371 chr2L 11841448 11841469 5 98 2.0 0.0 1.0 2.5 119 chr2L 11841350 intron Pde1c - chr2L 11841410 intron Pde1c - chr2L 11841469 intron Pde1c - chr2L_5_11840001 chr2L_11840001 D4-c1 286 chr2L 11844184 11844218 chr2L 11844267 11844301 15 83 6.0 6.5 6.2 2.1 117 chr2L 11844184 intron Pde1c - chr2L 11844242 intron Pde1c - chr2L 11844301 intron Pde1c - chr2L_15_11840001 chr2L_11840001 D4-c1 287 chr2L 11892545 11892820 chr2L 11892635 11892913 27 92 4.5 4.5 4.5 4.9 368 chr2L 11892545 intron Pde1c - chr2L 11892729 intron Pde1c - chr2L 11892913 intron Pde1c - chr2L_27_11890001 chr2L_11890001 D4-c1 288 chr2L 11913298 11913324 chr2L 11913400 11913426 17 101 6.5 6.0 6.2 2.4 128 chr2L 11913298 intron Pde1c - chr2L 11913362 intron Pde1c - chr2L 11913426 intron Pde1c - chr2L_17_11910001 chr2L_11910001 D4-c1 289 chr2L 11976096 11976117 chr2L 11976174 11976195 9 78 4.5 2.5 3.5 2.0 99 chr2L 11976096 intergenic not near genes chr2L 11976146 intergenic not near genes chr2L 11976195 intergenic not near genes chr2L_9_11975001 chr2L_11975001 D4-c1 290 chr2L 12012537 12012570 chr2L 12012666 12012699 6 132 50.0 48.0 49.0 0.1 162 chr2L 12012537 intergenic not near genes chr2L 12012618 intergenic not near genes chr2L 12012699 intergenic not near genes chr2L_6_12010001 chr2L_12010001 D4-c1 291 chr2L 12067353 12067361 chr2L 12074397 12074405 297 7 7044 4.0 2.0 3.0 1.8 7052 chr2L 12067353 intergenic not near genes chr2L 12070879 intergenic not near genes chr2L 12074405 intergenic not near genes chr2L_7_12070001 chr2L_12070001 D4-c1 292 chr2L 12112030 12112044 chr2L 12112136 12112156 5 111 0.0 3.5 1.8 1.8 126 chr2L 12112030 3` UTR Phae2 + chr2L 12112093 3` UTR Phae2 + chr2L 12112156 3` UTR Phae2 + chr2L_5_12110001 chr2L_12110001 D4-c1 293 chr2L 12154020 12154052 chr2L 12154496 12154528 15 476 4.5 6.5 5.5 2.3 508 chr2L 12154020 intron CG31760 + chr2L 12154274 intron CG31760 + chr2L 12154528 intron CG31760 + chr2L_15_12150001 chr2L_12150001 D4-c1 294 chr2L 12192359 12192366 chr2L 12192485 12192492 4 126 1.5 2.5 2.0 1.3 133 chr2L 12192359 intron aret + chr2L 12192426 intron aret + chr2L 12192492 intron aret + chr2L_4_12190001 chr2L_12190001 D4-c1 295 chr2L 12234035 12234063 chr2L 12234131 12234157 10 96 8.5 2.5 5.5 1.5 122 chr2L 12234035 intron aret + chr2L 12234096 intron aret + chr2L 12234157 intron aret + chr2L_10_12230001 chr2L_12230001 D4-c1 296 chr2L 12315659 12315686 chr2L 12316125 12316141 12 465 2.0 6.0 4.0 2.4 482 chr2L 12315659 intergenic CR45282 - chr2L 12315900 3` UTR CR45282 - chr2L 12316141 intergenic CR45282 -,CR45283 - chr2L_12_12315001 chr2L_12315001 D4-c1 297 chr2L 12322766 12322799 chr2L 12322843 12322876 13 77 4.5 6.5 5.5 2.0 110 chr2L 12322766 intergenic not near genes chr2L 12322821 intergenic not near genes chr2L 12322876 intergenic not near genes chr2L_13_12320001 chr2L_12320001 D4-c1 298 chr2L 12345406 12345428 chr2L 12345485 12345507 9 79 3.0 5.0 4.0 1.8 101 chr2L 12345406 intron bru-2 + chr2L 12345456 intron bru-2 + chr2L 12345507 intron bru-2 + chr2L_9_12345001 chr2L_12345001 D4-c1 299 chr2L 12361038 12361045 chr2L 12361186 12361199 4 152 3.0 2.0 2.5 1.1 161 chr2L 12361038 intron bru-2 + chr2L 12361118 intron bru-2 + chr2L 12361199 intron bru-2 + chr2L_4_12360001 chr2L_12360001 D4-c1 300 chr2L 12424345 12424366 chr2L 12424422 12424443 4 77 0.0 1.0 0.5 2.7 98 chr2L 12424345 intergenic not near genes chr2L 12424394 intergenic not near genes chr2L 12424443 intergenic CG6405 + chr2L_4_12420001 chr2L_12420001 D4-c1 301 chr2L 12426130 12426164 chr2L 12426214 12426248 24 83 5.0 2.5 3.8 5.0 118 chr2L 12426130 exon CG6405 + chr2L 12426189 exon CG6405 + chr2L 12426248 exon CG6405 + chr2L_24_12425001 chr2L_12425001 D4-c1 302 chr2L 12471134 12471138 chr2L 12471211 12471215 4 77 2.0 13.5 7.8 0.5 81 chr2L 12471134 intron bun - chr2L 12471174 intron bun - chr2L 12471215 intron bun - chr2L_4_12470001 chr2L_12470001 D4-c1 303 chr2L 12487886 12487920 chr2L 12487968 12488002 25 81 8.0 7.5 7.8 2.8 116 chr2L 12487886 intron bun - chr2L 12487944 intron bun - chr2L 12488002 intron bun - chr2L_25_12485001 chr2L_12485001 D4-c1 304 chr2L 12529239 12529266 chr2L 12529392 12529419 13 153 3.0 3.0 3.0 3.2 180 chr2L 12529239 intron bun - chr2L 12529329 intron bun - chr2L 12529419 intron bun - chr2L_13_12525001 chr2L_12525001 D4-c1 305 chr2L 12558317 12558349 chr2L 12565447 12565479 HMS-Beagle 11 7130 3.0 3.0 3.0 2.8 7162 chr2L 12558317 intergenic not near genes chr2L 12561898 intergenic not near genes chr2L 12565479 intergenic not near genes chr2L_11_12560001 chr2L_12560001 D4-c1 306 chr2L 12653791 12653811 chr2L 12653909 12653929 9 118 1.5 2.5 2.0 3.0 138 chr2L 12653791 intergenic not near genes chr2L 12653860 intergenic not near genes chr2L 12653929 intergenic not near genes chr2L_9_12650001 chr2L_12650001 D4-c1 307 chr2L 12728921 12728943 chr2L 12729161 12729183 pogo 10 240 7.5 6.5 7.0 1.2 262 chr2L 12728921 intron MRP + chr2L 12729052 intron MRP + chr2L 12729183 intron MRP + chr2L_10_12725001 chr2L_12725001 D4-c1 308 chr2L 12731053 12731088 chr2L 12735821 12735856 F-element 14 4768 3.5 7.5 5.5 2.2 4803 chr2L 12731053 intron MRP + chr2L 12733454 intron MRP + chr2L 12735856 intron MRP + chr2L_14_12730001 chr2L_12730001 D4-c1 309 chr2L 12739172 12739205 chr2L 12743954 12743987 Doc 15 4782 4.0 4.0 4.0 3.0 4815 chr2L 12739172 exon MRP + chr2L 12741580 intron MRP + chr2L 12743987 exon MRP + chr2L_15_12740001 chr2L_12740001 D4-c1 310 chr2L 12751309 12751339 chr2L 12751393 12751423 15 84 4.0 4.0 4.0 3.0 114 chr2L 12751309 intergenic not near genes chr2L 12751366 intergenic not near genes chr2L 12751423 intergenic not near genes chr2L_15_12750001 chr2L_12750001 D4-c1 311 chr2L 12763863 12763873 chr2L 12764064 12764074 BS 4 201 0.0 2.5 1.2 1.8 211 chr2L 12763863 intergenic not near genes chr2L 12763968 intergenic not near genes chr2L 12764074 intergenic not near genes chr2L_4_12760001 chr2L_12760001 D4-c1 312 chr2L 12766760 12766778 chr2L 12766839 12766857 10 79 3.5 3.0 3.2 2.4 97 chr2L 12766760 intergenic not near genes chr2L 12766808 intergenic not near genes chr2L 12766857 intergenic not near genes chr2L_10_12765001 chr2L_12765001 D4-c1 313 chr2L 12781798 12781814 chr2L 12789249 12789265 Quasimodo 11 7450 8.0 7.5 7.8 1.2 7467 chr2L 12781798 intergenic not near genes chr2L 12785532 intergenic not near genes chr2L 12789265 intergenic not near genes chr2L_11_12785001 chr2L_12785001 D4-c1 314 chr2L 12791604 12791618 chr2L 12795280 12795283 F-element 5 3674 5.0 2.5 3.8 1.0 3679 chr2L 12791604 intergenic not near genes chr2L 12793444 intergenic not near genes chr2L 12795283 intergenic not near genes chr2L_5_12790001 chr2L_12790001 D4-c1 315 chr2L 12811458 12811472 chr2L 12811558 12811572 7 100 0.0 7.0 3.5 1.6 114 chr2L 12811458 intergenic not near genes chr2L 12811515 intergenic not near genes chr2L 12811572 intergenic not near genes chr2L_7_12810001 chr2L_12810001 D4-c1 316 chr2L 12811983 12812011 chr2L 12812092 12812120 14 109 4.5 2.5 3.5 3.1 137 chr2L 12811983 intergenic not near genes chr2L 12812052 intergenic not near genes chr2L 12812120 intergenic not near genes chr2L_14_12810001 chr2L_12810001 D4-c1 317 chr2L 12846884 12846908 chr2L 12846984 12847008 19 100 3.5 10.0 6.8 2.4 124 chr2L 12846884 intergenic not near genes chr2L 12846946 intergenic not near genes chr2L 12847008 intergenic not near genes chr2L_19_12845001 chr2L_12845001 D4-c1 318 chr2L 12861704 12861730 chr2L 12863172 12863196 hobo 15 1467 1.0 4.5 2.8 3.9 1492 chr2L 12861704 intergenic not near genes chr2L 12862450 intergenic not near genes chr2L 12863196 intergenic not near genes chr2L_15_12860001 chr2L_12860001 D4-c1 319 chr2L 12889029 12889063 chr2L 12889112 12889135 19 82 4.5 5.0 4.8 3.3 106 chr2L 12889029 intergenic not near genes chr2L 12889082 intergenic not near genes chr2L 12889135 intergenic not near genes chr2L_19_12885001 chr2L_12885001 D4-c1 320 chr2L 12894021 12894054 chr2L 12895489 12895522 hobo 25 1466 8.0 7.0 7.5 2.9 1501 chr2L 12894021 intergenic not near genes chr2L 12894772 intergenic not near genes chr2L 12895522 intergenic not near genes chr2L_25_12890001 chr2L_12890001 D4-c1 321 chr2L 12905474 12905508 chr2L 12905559 12905593 13 85 1.5 1.5 1.5 5.2 119 chr2L 12905474 intergenic not near genes chr2L 12905534 intergenic not near genes chr2L 12905593 intergenic not near genes chr2L_13_12905001 chr2L_12905001 D4-c1 322 chr2L 12933848 12933880 chr2L 12941316 12941348 blood 17 7468 6.5 7.0 6.8 2.2 7500 chr2L 12933848 intergenic not near genes chr2L 12937598 intergenic not near genes chr2L 12941348 intergenic not near genes chr2L_17_12935001 chr2L_12935001 D4-c1 323 chr2L 12949248 12949282 chr2L 12949342 12949376 8 90 7.5 3.0 5.2 1.3 128 chr2L 12949248 intergenic not near genes chr2L 12949312 intergenic not near genes chr2L 12949376 intergenic not near genes chr2L_8_12945001 chr2L_12945001 D4-c1 324 chr2L 12955873 12955910 chr2L 12956074 12956111 12 200 2.0 3.5 2.8 3.2 238 chr2L 12955873 intergenic not near genes chr2L 12955992 intergenic not near genes chr2L 12956111 intergenic not near genes chr2L_12_12955001 chr2L_12955001 D4-c1 325 chr2L 13043403 13043433 chr2L 13043482 13043512 16 79 1.5 2.0 1.8 5.7 109 chr2L 13043403 intron CG9932 - chr2L 13043458 intron CG9932 - chr2L 13043512 intron CG9932 - chr2L_16_13040001 chr2L_13040001 D4-c1 326 chr2L 13109452 13109469 chr2L 13109581 13109598 9 129 4.5 5.0 4.8 1.6 146 chr2L 13109452 3` UTR CG5142 + chr2L 13109525 intergenic CG5142 + chr2L 13109598 intergenic CG5142 + chr2L_9_13105001 chr2L_13105001 D4-c1 327 chr2L 13152228 13152259 chr2L 13152307 13152338 16 79 7.0 4.5 5.8 2.4 110 chr2L 13152228 intergenic not near genes chr2L 13152283 intergenic not near genes chr2L 13152338 intergenic not near genes chr2L_16_13150001 chr2L_13150001 D4-c1 328 chr2L 13154109 13154119 chr2L 13154188 13154198 7 79 4.0 0.0 2.0 2.3 89 chr2L 13154109 intergenic not near genes chr2L 13154154 intergenic not near genes chr2L 13154198 intergenic not near genes chr2L_7_13150001 chr2L_13150001 D4-c1 329 chr2L 13215380 13215413 chr2L 13215656 13215689 15 276 5.0 5.5 5.2 2.4 309 chr2L 13215380 intergenic kek4 -,snRNA:U2:34ABb +,snRNA:U2:34ABc + chr2L 13215534 intergenic kek4 -,snRNA:U2:34ABb +,snRNA:U2:34ABc + chr2L 13215689 intergenic snRNA:U2:34ABb +,snRNA:U2:34ABc +,kek4 - chr2L_15_13215001 chr2L_13215001 D4-c1 330 chr2L 13358251 13358266 chr2L 13358335 13358350 9 83 13.0 12.0 12.5 0.7 99 chr2L 13358251 intergenic not near genes chr2L 13358300 intergenic not near genes chr2L 13358350 intergenic not near genes chr2L_9_13355001 chr2L_13355001 D4-c1 331 chr2L 13405645 13405677 chr2L 13410443 13410475 Doc 14 4798 8.0 4.0 6.0 2.0 4830 chr2L 13405645 exon CG7110 + chr2L 13408060 intron CG7110 + chr2L 13410475 intron CG7110 + chr2L_14_13405001 chr2L_13405001 D4-c1 332 chr2L 13422484 13422507 chr2L 13422564 13422587 11 80 0.0 7.5 3.8 2.3 103 chr2L 13422484 intron CG42784 + chr2L 13422536 intron CG42784 + chr2L 13422587 intron CG42784 + chr2L_11_13420001 chr2L_13420001 D4-c1 333 chr2L 13449461 13449495 chr2L 13456898 13456932 Quasimodo 14 7436 6.5 3.0 4.8 2.4 7471 chr2L 13449461 intron,5` UTR CG42784 +,Hsp60D - chr2L 13453196 intron CG42784 + chr2L 13456932 intron CG42784 + chr2L_14_13450001 chr2L_13450001 D4-c1 334 chr2L 13481448 13481473 chr2L 13482056 13482081 jockey 12 608 8.5 7.5 8.0 1.3 633 chr2L 13481448 intron CG42784 + chr2L 13481764 intron CG42784 + chr2L 13482081 intron CG42784 + chr2L_12_13480001 chr2L_13480001 D4-c1 335 chr2L 13690729 13690759 chr2L 13693111 13693139 16 2382 21.0 28.5 24.8 0.6 2410 chr2L 13690729 intron CG31814 - chr2L 13691934 intron CG31814 - chr2L 13693139 intron CG31814 - chr2L_16_13690001 chr2L_13690001 D4-c1 336 chr2L 13690530 13690547 chr2L 13693983 13694000 6 3453 34.5 9.0 21.8 0.3 3470 chr2L 13690530 exon CG31814 - chr2L 13692265 intron CG31814 - chr2L 13694000 intron CG31814 - chr2L_6_13690001 chr2L_13690001 D4-c1 337 chr2L 13713562 13713573 chr2L 13713639 13713650 4 77 6.0 1.5 3.8 0.8 88 chr2L 13713562 intron CG31814 - chr2L 13713606 intron CG31814 - chr2L 13713650 intron CG31814 - chr2L_4_13710001 chr2L_13710001 D4-c1 338 chr2L 13761803 13761835 chr2L 13762915 13762947 Doc 11 1112 5.5 7.5 6.5 1.5 1144 chr2L 13761803 intron TM9SF4 + chr2L 13762375 intron TM9SF4 + chr2L 13762947 intron TM9SF4 + chr2L_11_13760001 chr2L_13760001 D4-c1 339 chr2L 13800171 13800203 chr2L 13800276 13800308 13 105 2.5 1.5 2.0 4.3 137 chr2L 13800171 intergenic Sec71 + chr2L 13800240 intergenic not near genes chr2L 13800308 intergenic not near genes chr2L_13_13800001 chr2L_13800001 D4-c1 340 chr2L 13853082 13853113 chr2L 13862233 13862264 roo 20 9151 7.0 4.5 5.8 2.9 9182 chr2L 13853082 intron CenG1A + chr2L 13857673 intron CenG1A + chr2L 13862264 intron CenG1A + chr2L_20_13855001 chr2L_13855001 D4-c1 341 chr2L 13974767 13974793 chr2L 13975171 13975197 20 403 9.5 8.0 8.8 2.0 430 chr2L 13974767 exon NimC1 - chr2L 13974982 exon NimC1 - chr2L 13975197 exon NimC1 - chr2L_20_13970001 chr2L_13970001 D4-c1 342 chr2L 14005184 14005193 chr2L 14005263 14005266 7 78 6.5 5.0 5.8 1.0 82 chr2L 14005184 intergenic not near genes chr2L 14005225 intergenic not near genes chr2L 14005266 intergenic not near genes chr2L_7_14005001 chr2L_14005001 D4-c1 343 chr2L 14010403 14010433 chr2L 14010480 14010510 12 77 0.0 2.0 1.0 6.0 107 chr2L 14010403 intergenic not near genes chr2L 14010456 intergenic not near genes chr2L 14010510 intergenic not near genes chr2L_12_14010001 chr2L_14010001 D4-c1 344 chr2L 14112752 14112772 chr2L 14112844 14112864 7 91 3.5 4.0 3.8 1.5 112 chr2L 14112752 intergenic not near genes chr2L 14112808 intergenic not near genes chr2L 14112864 intergenic not near genes chr2L_7_14110001 chr2L_14110001 D4-c1 345 chr2L 14367818 14367842 chr2L 14367946 14367970 10 128 6.5 6.5 6.5 1.3 152 chr2L 14367818 intergenic not near genes chr2L 14367894 intergenic not near genes chr2L 14367970 intergenic not near genes chr2L_10_14365001 chr2L_14365001 D4-c1 346 chr2L 14410042 14410060 chr2L 14410138 14410156 6 96 2.5 5.5 4.0 1.2 114 chr2L 14410042 5` UTR CR44733 + chr2L 14410099 intergenic CR44733 + chr2L 14410156 intergenic CR44733 + chr2L_6_14410001 chr2L_14410001 D4-c1 347 chr2L 14462730 14462734 chr2L 14462818 14462822 4 88 2.5 0.0 1.2 1.8 92 chr2L 14462730 intergenic not near genes chr2L 14462776 intergenic not near genes chr2L 14462822 intergenic not near genes chr2L_4_14460001 chr2L_14460001 D4-c1 348 chr2L 14564207 14564231 chr2L 14564272 14564308 19 75 6.0 7.5 6.8 2.4 101 chr2L 14564207 intergenic CG3473 - chr2L 14564258 intergenic not near genes chr2L 14564308 intergenic not near genes chr2L_19_14560001 chr2L_14560001 D4-c1 349 chr2L 14588386 14588417 chr2L 14588541 14588572 14 154 1.5 2.0 1.8 5.0 186 chr2L 14588386 intergenic CG42680 - chr2L 14588479 intergenic CG42680 - chr2L 14588572 intergenic CG42680 - chr2L_14_14585001 chr2L_14585001 D4-c1 350 chr2L 14642569 14642601 chr2L 14651733 14651765 roo 10 9164 3.5 3.5 3.5 2.2 9196 chr2L 14642569 intron osp - chr2L 14647167 intron osp - chr2L 14651765 intron osp - chr2L_10_14645001 chr2L_14645001 D4-c1 351 chr2L 14694252 14694290 chr2L 14694377 14694415 15 125 5.0 2.5 3.8 3.1 163 chr2L 14694252 intergenic not near genes chr2L 14694334 intergenic not near genes chr2L 14694415 intergenic not near genes chr2L_15_14690001 chr2L_14690001 D4-c1 352 chr2L 14778804 14778839 chr2L 14779093 14779128 14 288 4.0 5.0 4.5 2.5 324 chr2L 14778804 intergenic not near genes chr2L 14778966 intergenic not near genes chr2L 14779128 intergenic not near genes chr2L_14_14775001 chr2L_14775001 D4-c1 353 chr2L 14803876 14803913 chr2L 14809080 14809117 copia 24 5204 5.0 4.5 4.8 4.1 5241 chr2L 14803876 intergenic not near genes chr2L 14806496 intergenic not near genes chr2L 14809117 intergenic not near genes chr2L_24_14805001 chr2L_14805001 D4-c1 354 chr2L 14833794 14833823 chr2L 14833899 14833928 11 105 2.5 3.0 2.8 2.9 134 chr2L 14833794 intergenic not near genes chr2L 14833861 intergenic not near genes chr2L 14833928 intergenic not near genes chr2L_11_14830001 chr2L_14830001 D4-c1 355 chr2L 14840977 14841010 chr2L 14841065 14841098 15 88 2.0 3.5 2.8 3.9 121 chr2L 14840977 3` UTR CR43805 - chr2L 14841038 3` UTR CR43805 - chr2L 14841098 3` UTR CR43805 - chr2L_15_14840001 chr2L_14840001 D4-c1 356 chr2L 14854596 14854628 chr2L 14854682 14854714 10 86 5.0 3.0 4.0 2.0 118 chr2L 14854596 intergenic not near genes chr2L 14854655 intergenic not near genes chr2L 14854714 intergenic not near genes chr2L_10_14850001 chr2L_14850001 D4-c1 357 chr2L 14889950 14889985 chr2L 14890376 14890411 jockey 5 426 5.5 4.0 4.8 0.9 461 chr2L 14889950 intergenic not near genes chr2L 14890180 intergenic not near genes chr2L 14890411 intergenic not near genes chr2L_5_14890001 chr2L_14890001 D4-c1 358 chr2L 15000862 15000887 chr2L 15000987 15001012 11 125 32.5 24.5 28.5 0.4 150 chr2L 15000862 intergenic not near genes chr2L 15000937 intergenic not near genes chr2L 15001012 intergenic not near genes chr2L_11_15000001 chr2L_15000001 D4-c1 359 chr2L 15044706 15044739 chr2L 15044783 15044816 15 77 1.0 0.0 0.5 10.0 110 chr2L 15044706 intergenic ck - chr2L 15044761 intergenic ck - chr2L 15044816 intergenic ck - chr2L_15_15040001 chr2L_15040001 D4-c1 360 chr2L 15077906 15078102 chr2L 15077995 15078191 12 89 2.5 5.5 4.0 2.4 285 chr2L 15077906 intron CG15270 + chr2L 15078048 intron CG15270 + chr2L 15078191 intron CG15270 + chr2L_12_15075001 chr2L_15075001 D4-c1 361 chr2L 15082659 15082692 chr2L 15082754 15082787 15 95 2.5 2.5 2.5 4.3 128 chr2L 15082659 intron CG15270 + chr2L 15082723 intron CG15270 + chr2L 15082787 intron CG15270 + chr2L_15_15080001 chr2L_15080001 D4-c1 362 chr2L 15122773 15122809 chr2L 15122854 15122890 12 81 1.5 1.5 1.5 4.8 117 chr2L 15122773 intergenic not near genes chr2L 15122832 intergenic not near genes chr2L 15122890 intergenic not near genes chr2L_12_15120001 chr2L_15120001 D4-c1 363 chr2L 15156602 15156633 chr2L 15156685 15156709 16 80 4.5 7.0 5.8 2.4 107 chr2L 15156602 intergenic not near genes chr2L 15156656 intergenic not near genes chr2L 15156709 intergenic not near genes chr2L_16_15155001 chr2L_15155001 D4-c1 364 chr2L 15219678 15219694 chr2L 15219756 15219772 9 78 10.0 12.5 11.2 0.7 94 chr2L 15219678 intergenic not near genes chr2L 15219725 intergenic not near genes chr2L 15219772 intergenic not near genes chr2L_9_15215001 chr2L_15215001 D4-c1 365 chr2L 15226369 15226392 chr2L 15226443 15226469 9 77 7.0 6.0 6.5 1.2 100 chr2L 15226369 intergenic not near genes chr2L 15226419 intergenic not near genes chr2L 15226469 intergenic not near genes chr2L_9_15225001 chr2L_15225001 D4-c1 366 chr2L 15233931 15233947 chr2L 15234028 15234044 9 97 0.0 2.5 1.2 4.1 113 chr2L 15233931 intron ZnT35C - chr2L 15233988 intron ZnT35C - chr2L 15234044 intron ZnT35C - chr2L_9_15230001 chr2L_15230001 D4-c1 367 chr2L 15343535 15343560 chr2L 15343621 15343646 7 86 8.0 0.5 4.2 1.3 111 chr2L 15343535 intergenic not near genes chr2L 15343590 intergenic not near genes chr2L 15343646 intergenic not near genes chr2L_7_15340001 chr2L_15340001 D4-c1 368 chr2L 15394172 15394201 chr2L 15394263 15394292 4 91 2.0 0.5 1.2 1.8 120 chr2L 15394172 intergenic not near genes chr2L 15394232 intergenic not near genes chr2L 15394292 intergenic not near genes chr2L_4_15390001 chr2L_15390001 D4-c1 369 chr2L 15405241 15405272 chr2L 15405324 15405355 16 83 5.0 3.0 4.0 3.2 114 chr2L 15405241 intergenic not near genes chr2L 15405298 intergenic not near genes chr2L 15405355 intergenic not near genes chr2L_16_15405001 chr2L_15405001 D4-c1 370 chr2L 15446049 15446084 chr2L 15453519 15453554 blood 16 7469 3.5 5.5 4.5 2.9 7505 chr2L 15446049 intergenic not near genes chr2L 15449802 intergenic not near genes chr2L 15453554 intergenic not near genes chr2L_16_15445001 chr2L_15445001 D4-c1 371 chr2L 15499934 15499940 chr2L 15500022 15500028 5 88 0.0 11.0 5.5 0.8 94 chr2L 15499934 intron lace + chr2L 15499981 intron lace + chr2L 15500028 intron lace + chr2L_5_15495001 chr2L_15495001 D4-c1 372 chr2L 15510934 15510964 chr2L 15511029 15511059 10 95 7.0 4.0 5.5 1.5 125 chr2L 15510934 intergenic not near genes chr2L 15510996 intergenic not near genes chr2L 15511059 intergenic not near genes chr2L_10_15510001 chr2L_15510001 D4-c1 373 chr2L 15514319 15514328 chr2L 15514404 15514413 7 85 6.0 7.0 6.5 0.9 94 chr2L 15514319 intergenic not near genes chr2L 15514366 intergenic not near genes chr2L 15514413 intergenic not near genes chr2L_7_15510001 chr2L_15510001 D4-c1 374 chr2L 15586408 15586441 chr2L 15593461 15593494 297 15 7053 3.0 1.5 2.2 4.7 7086 chr2L 15586408 intergenic not near genes chr2L 15589951 intergenic not near genes chr2L 15593494 intergenic not near genes chr2L_15_15585001 chr2L_15585001 D4-c1 375 chr2L 15602865 15602888 chr2L 15603296 15603319 10 431 4.5 5.5 5.0 1.7 454 chr2L 15602865 intergenic not near genes chr2L 15603092 intergenic not near genes chr2L 15603319 intergenic not near genes chr2L_10_15600001 chr2L_15600001 D4-c1 376 chr2L 15773571 15773585 chr2L 15773653 15773667 INE-1 8 82 2.0 0.5 1.2 3.6 96 chr2L 15773571 intergenic CG31826 - chr2L 15773619 intergenic not near genes chr2L 15773667 intergenic not near genes chr2L_8_15770001 chr2L_15770001 D4-c1 377 chr2L 15776402 15776414 chr2L 15776498 15776510 9 96 6.0 6.5 6.2 1.2 108 chr2L 15776402 intergenic CG43760 - chr2L 15776456 3` UTR CG43760 - chr2L 15776510 3` UTR CG43760 - chr2L_9_15775001 chr2L_15775001 D4-c1 378 chr2L 15863209 15863228 chr2L 15863437 15863456 5 228 1.5 1.5 1.5 2.0 247 chr2L 15863209 5` UTR CR42791 + chr2L 15863332 5` UTR CR42791 + chr2L 15863456 5` UTR CR42791 + chr2L_5_15860001 chr2L_15860001 D4-c1 379 chr2L 15915649 15915681 chr2L 15915728 15915760 14 78 8.0 4.0 6.0 2.0 111 chr2L 15915649 intron beat-Ib - chr2L 15915704 intron beat-Ib - chr2L 15915760 intron beat-Ib - chr2L_14_15915001 chr2L_15915001 D4-c1 380 chr2L 15935188 15935221 chr2L 15935278 15935312 9 90 2.0 2.0 2.0 3.0 124 chr2L 15935188 intron beat-Ib - chr2L 15935250 intron beat-Ib - chr2L 15935312 intron beat-Ib - chr2L_9_15935001 chr2L_15935001 D4-c1 381 chr2L 15956021 15956055 chr2L 15957489 15957523 hobo 21 1468 7.5 5.0 6.2 2.9 1502 chr2L 15956021 intron beat-Ib - chr2L 15956772 intron beat-Ib - chr2L 15957523 intron beat-Ib - chr2L_21_15955001 chr2L_15955001 D4-c1 382 chr2L 15960853 15960863 chr2L 15961175 15961185 8 322 26.0 6.0 16.0 0.5 332 chr2L 15960853 intron,5` UTR beat-Ib -,CR43803 + chr2L 15961019 intron,5` UTR beat-Ib -,CR43803 + chr2L 15961185 intron,5` UTR beat-Ib -,CR43803 + chr2L_8_15960001 chr2L_15960001 D4-c1 383 chr2L 15996575 15996609 chr2L 15996698 15996732 12 123 3.0 2.0 2.5 3.4 157 chr2L 15996575 intergenic not near genes chr2L 15996654 intergenic not near genes chr2L 15996732 intergenic not near genes chr2L_12_15995001 chr2L_15995001 D4-c1 384 chr2L 16001462 16001493 chr2L 16001551 16001582 10 89 0.0 1.0 0.5 6.7 120 chr2L 16001462 intron beat-Ic + chr2L 16001522 intron beat-Ic + chr2L 16001582 intron beat-Ic + chr2L_10_16000001 chr2L_16000001 D4-c1 385 chr2L 16058123 16058152 chr2L 16058265 16058293 17 142 2.0 4.5 3.2 4.0 170 chr2L 16058123 intron beat-Ia + chr2L 16058208 intron beat-Ia + chr2L 16058293 intron beat-Ia + chr2L_17_16055001 chr2L_16055001 D4-c1 386 chr2L 8578452 8578452 chr2L 16071771 16071771 6 7493319 19.5 31.5 25.5 0.2 7493319 chr2L 8578452 intron Sema-1a + chr2L 12325112 intergenic not near genes chr2L 16071771 intron beat-Ia + chr2L_6_12325001 chr2L_12325001 D4-c1 387 chr2L 10522358 10522358 chr2L 16071771 16071771 4 5549413 16.0 31.5 23.8 0.2 5549413 chr2L 10522358 intergenic not near genes chr2L 13297064 intron CG31729 + chr2L 16071771 intron beat-Ia + chr2L_4_13295001 chr2L_13295001 D4-c1 388 chr2L 16071771 16071771 chr2L 16217660 16217661 copia 34 145889 31.0 17.0 24.0 1.4 145890 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217661 intergenic not near genes chr2L_34_16140001 chr2L_16140001 D4-c1 389 chr2L 16141162 16141194 chr2L 16146370 16146402 copia 11 5208 2.5 6.0 4.2 2.1 5240 chr2L 16141162 intergenic not near genes chr2L 16143782 intergenic not near genes chr2L 16146402 intergenic not near genes chr2L_11_16140001 chr2L_16140001 D4-c1 390 chr2L 16153733 16153760 chr2L 16160788 16160815 297 13 7055 6.5 8.5 7.5 1.5 7082 chr2L 16153733 intergenic not near genes chr2L 16157274 intergenic not near genes chr2L 16160815 intergenic not near genes chr2L_13_16155001 chr2L_16155001 D4-c1 391 chr2L 16171765 16171805 chr2L 16171860 16171900 16 95 4.0 3.0 3.5 3.6 135 chr2L 16171765 intron Ca-alpha1D + chr2L 16171832 intron Ca-alpha1D + chr2L 16171900 intron Ca-alpha1D + chr2L_16_16170001 chr2L_16170001 D4-c1 392 chr2L 9084336 9084340 chr2L 16217660 16217660 12 7133323 26.0 17.0 21.5 0.5 7133324 chr2L 9084336 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_12_12650001 chr2L_12650001 D4-c1 393 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 16 145889 31.0 17.0 24.0 0.6 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_16_16140001 chr2L_16140001 D4-c1 394 chr2L 16217660 16217660 chr2L 18622718 18622719 6 2405058 15.0 30.5 22.8 0.3 2405059 chr2L 16217660 intergenic not near genes chr2L 17420190 intron Dif - chr2L 18622719 intron MESR3 + chr2L_6_17420001 chr2L_17420001 D4-c1 395 chr2L 16254892 16254917 chr2L 16255152 16255177 15 260 3.5 4.0 3.8 3.1 285 chr2L 16254892 intron PRL-1 - chr2L 16255034 intron PRL-1 - chr2L 16255177 intron PRL-1 - chr2L_15_16255001 chr2L_16255001 D4-c1 396 chr2L 16280253 16280287 chr2L 16281425 16281459 1360 24 1172 1.5 6.0 3.8 5.0 1206 chr2L 16280253 intron crp - chr2L 16280856 intron crp - chr2L 16281459 intron crp - chr2L_24_16280001 chr2L_16280001 D4-c1 397 chr2L 16354773 16354786 chr2L 16354866 16354879 5 93 2.0 4.5 3.2 1.2 106 chr2L 16354773 intergenic CaBP1 -,CG4455 + chr2L 16354826 intergenic CaBP1 -,CG4455 + chr2L 16354879 intergenic CaBP1 -,CG4455 + chr2L_5_16350001 chr2L_16350001 D4-c1 398 chr2L 16391800 16391831 chr2L 16391877 16391908 6 77 2.5 1.5 2.0 2.0 108 chr2L 16391800 intergenic not near genes chr2L 16391854 intergenic not near genes chr2L 16391908 intergenic not near genes chr2L_6_16390001 chr2L_16390001 D4-c1 399 chr2L 16434105 16434126 chr2L 16434188 16434209 9 83 4.0 1.0 2.5 2.6 104 chr2L 16434105 intron CG5888 - chr2L 16434157 intron CG5888 - chr2L 16434209 intron CG5888 - chr2L_9_16430001 chr2L_16430001 D4-c1 400 chr2L 16480606 16480609 chr2L 16480695 16480698 5 89 10.5 6.0 8.2 0.5 92 chr2L 16480606 intron dac - chr2L 16480652 intron dac - chr2L 16480698 intron dac - chr2L_5_16480001 chr2L_16480001 D4-c1 401 chr2L 16480610 16480631 chr2L 16480694 16480720 8 88 4.5 6.0 5.2 1.3 110 chr2L 16480610 intron dac - chr2L 16480665 intron dac - chr2L 16480720 intron dac - chr2L_8_16480001 chr2L_16480001 D4-c1 402 chr2L 16507943 16507967 chr2L 16508032 16508056 5 89 0.0 6.5 3.2 1.2 113 chr2L 16507943 intergenic CG5953 -,Tpr2 + chr2L 16508000 intergenic CG5953 -,Tpr2 + chr2L 16508056 intergenic CG5953 -,Tpr2 + chr2L_5_16505001 chr2L_16505001 D4-c1 403 chr2L 16535252 16535282 chr2L 16535373 16535403 10 121 4.5 6.0 5.2 1.6 151 chr2L 16535252 intergenic CR45355 - chr2L 16535328 intergenic CR45355 - chr2L 16535403 intergenic CR45355 - chr2L_10_16535001 chr2L_16535001 D4-c1 404 chr2L 16573238 16573262 chr2L 16573322 16573346 18 83 9.5 12.0 10.8 1.5 108 chr2L 16573238 intron CG42389 + chr2L 16573292 intron CG42389 + chr2L 16573346 intron CG42389 + chr2L_18_16570001 chr2L_16570001 D4-c1 405 chr2L 16583091 16583124 chr2L 16583180 16583211 13 89 6.0 1.5 3.8 2.7 120 chr2L 16583091 intron CG42389 + chr2L 16583151 intron CG42389 + chr2L 16583211 intron CG42389 + chr2L_13_16580001 chr2L_16580001 D4-c1 406 chr2L 16583549 16583581 chr2L 16583684 16583716 12 135 2.5 4.0 3.2 2.9 167 chr2L 16583549 intron CG42389 + chr2L 16583632 intron CG42389 + chr2L 16583716 intron CG42389 + chr2L_12_16580001 chr2L_16580001 D4-c1 407 chr2L 16693911 16693942 chr2L 16693993 16694024 17 82 1.5 5.5 3.5 3.8 113 chr2L 16693911 intron grp + chr2L 16693968 intron grp + chr2L 16694024 intron grp + chr2L_17_16690001 chr2L_16690001 D4-c1 408 chr2L 16710716 16710750 chr2L 16710801 16710835 15 84 5.5 7.0 6.2 2.1 119 chr2L 16710716 intron CG31808 - chr2L 16710776 intron CG31808 - chr2L 16710835 intron CG31808 - chr2L_15_16710001 chr2L_16710001 D4-c1 409 chr2L 16852435 16852454 chr2L 16858605 16858629 Doc3-element 12 6173 17.5 9.5 13.5 0.8 6194 chr2L 16852435 intergenic CG31810 - chr2L 16855532 intron CG31809 - chr2L 16858629 5` UTR CG31809 - chr2L_12_16855001 chr2L_16855001 D4-c1 410 chr2L 16852793 16852805 chr2L 16859936 16859948 Doc4-element 8 7143 7.0 5.5 6.2 1.1 7155 chr2L 16852793 intergenic CG31810 - chr2L 16856370 intron CG31809 - chr2L 16859948 intergenic CG6012 - chr2L_8_16855001 chr2L_16855001 D4-c1 411 chr2L 16873278 16873296 chr2L 16873356 16873373 8 78 0.5 8.0 4.2 1.5 95 chr2L 16873278 intron CR31781 + chr2L 16873326 intron CR31781 + chr2L 16873373 intron CR31781 + chr2L_8_16870001 chr2L_16870001 D4-c1 412 chr2L 16927468 16927500 chr2L 16927560 16927593 12 90 5.0 4.0 4.5 2.2 125 chr2L 16927468 intergenic not near genes chr2L 16927530 intergenic not near genes chr2L 16927593 intergenic not near genes chr2L_12_16925001 chr2L_16925001 D4-c1 413 chr2L 16942932 16942962 chr2L 16943011 16943041 12 79 1.5 4.5 3.0 3.0 109 chr2L 16942932 intergenic not near genes chr2L 16942986 intergenic not near genes chr2L 16943041 intergenic not near genes chr2L_12_16940001 chr2L_16940001 D4-c1 414 chr2L 16958104 16958135 chr2L 16962893 16962924 Doc 16 4789 2.0 7.0 4.5 2.9 4820 chr2L 16958104 intergenic not near genes chr2L 16960514 intergenic not near genes chr2L 16962924 intergenic not near genes chr2L_16_16960001 chr2L_16960001 D4-c1 415 chr2L 16989229 16989243 chr2L 16989329 16989344 5 101 1.5 4.0 2.8 1.3 115 chr2L 16989229 intron beat-IIIb + chr2L 16989286 intron beat-IIIb + chr2L 16989344 intron beat-IIIb + chr2L_5_16985001 chr2L_16985001 D4-c1 416 chr2L 16989244 16989255 chr2L 16989327 16989339 5 93 0.5 4.0 2.2 1.6 95 chr2L 16989244 intron beat-IIIb + chr2L 16989292 intron beat-IIIb + chr2L 16989339 intron beat-IIIb + chr2L_5_16985001 chr2L_16985001 D4-c1 417 chr2L 16991478 16991512 chr2L 16991585 16991619 7 107 4.5 2.0 3.2 1.7 141 chr2L 16991478 intron beat-IIIb + chr2L 16991548 intron beat-IIIb + chr2L 16991619 intron beat-IIIb + chr2L_7_16990001 chr2L_16990001 D4-c1 418 chr2L 16993603 16993636 chr2L 16993691 16993724 14 88 1.5 3.0 2.2 4.4 121 chr2L 16993603 3` UTR beat-IIIb + chr2L 16993664 3` UTR beat-IIIb + chr2L 16993724 3` UTR beat-IIIb + chr2L_14_16990001 chr2L_16990001 D4-c1 419 chr2L 17005411 17005435 chr2L 17005509 17005533 17 97 3.5 6.0 4.8 2.9 122 chr2L 17005411 intergenic not near genes chr2L 17005472 intergenic not near genes chr2L 17005533 intergenic not near genes chr2L_17_17005001 chr2L_17005001 D4-c1 420 chr2L 17016396 17016428 chr2L 17016653 17016685 25 257 5.5 4.5 5.0 4.2 289 chr2L 17016396 intergenic not near genes chr2L 17016540 intergenic not near genes chr2L 17016685 intergenic not near genes chr2L_25_17015001 chr2L_17015001 D4-c1 421 chr2L 17032501 17032523 chr2L 17032587 17032609 9 86 3.0 2.5 2.8 2.4 108 chr2L 17032501 intergenic not near genes chr2L 17032555 intergenic not near genes chr2L 17032609 intergenic not near genes chr2L_9_17030001 chr2L_17030001 D4-c1 422 chr2L 17033919 17033939 chr2L 17034005 17034025 8 86 5.0 5.5 5.2 1.3 106 chr2L 17033919 intergenic not near genes chr2L 17033972 intergenic not near genes chr2L 17034025 intergenic not near genes chr2L_8_17030001 chr2L_17030001 D4-c1 423 chr2L 17050014 17050049 chr2L 17050101 17050136 14 86 4.5 3.0 3.8 2.9 122 chr2L 17050014 intergenic not near genes chr2L 17050075 intergenic not near genes chr2L 17050136 intergenic not near genes chr2L_14_17050001 chr2L_17050001 D4-c1 424 chr2L 17052412 17052443 chr2L 17052525 17052556 8 113 1.0 4.0 2.5 2.3 144 chr2L 17052412 intergenic not near genes chr2L 17052484 intergenic not near genes chr2L 17052556 intergenic not near genes chr2L_8_17050001 chr2L_17050001 D4-c1 425 chr2L 17053279 17053311 chr2L 17053690 17053722 13 411 3.0 5.5 4.2 2.5 443 chr2L 17053279 intergenic not near genes chr2L 17053500 intergenic not near genes chr2L 17053722 intergenic not near genes chr2L_13_17050001 chr2L_17050001 D4-c1 426 chr2L 17062756 17062790 chr2L 17062838 17062873 6 83 2.0 3.0 2.5 1.7 117 chr2L 17062756 intergenic not near genes chr2L 17062814 intergenic not near genes chr2L 17062873 intergenic not near genes chr2L_6_17060001 chr2L_17060001 D4-c1 427 chr2L 17070200 17070217 chr2L 17070297 17070314 10 97 3.5 5.5 4.5 1.8 114 chr2L 17070200 intergenic not near genes chr2L 17070257 intergenic not near genes chr2L 17070314 intergenic not near genes chr2L_10_17070001 chr2L_17070001 D4-c1 428 chr2L 17076528 17076565 chr2L 17076615 17076652 15 87 5.0 3.5 4.2 2.9 124 chr2L 17076528 intergenic not near genes chr2L 17076590 intergenic not near genes chr2L 17076652 intergenic not near genes chr2L_15_17075001 chr2L_17075001 D4-c1 429 chr2L 17087384 17087403 chr2L 17087497 17087522 15 118 2.5 1.5 2.0 5.0 138 chr2L 17087384 intergenic CG12620 + chr2L 17087453 intergenic CG12620 + chr2L 17087522 intergenic CG12620 + chr2L_15_17085001 chr2L_17085001 D4-c1 430 chr2L 17101018 17101048 chr2L 17101548 17101576 6 528 32.0 29.0 30.5 0.2 558 chr2L 17101018 intergenic not near genes chr2L 17101297 intergenic not near genes chr2L 17101576 intergenic not near genes chr2L_6_17100001 chr2L_17100001 D4-c1 431 chr2L 17104068 17104098 chr2L 17104340 17104370 9 272 9.0 7.5 8.2 1.0 302 chr2L 17104068 intergenic not near genes chr2L 17104219 intergenic not near genes chr2L 17104370 intergenic not near genes chr2L_9_17100001 chr2L_17100001 D4-c1 432 chr2L 17108270 17108281 chr2L 17108394 17108405 5 124 3.0 6.0 4.5 0.9 135 chr2L 17108270 intergenic not near genes chr2L 17108338 intergenic not near genes chr2L 17108405 intergenic not near genes chr2L_5_17105001 chr2L_17105001 D4-c1 433 chr2L 17158728 17158758 chr2L 17158831 17158861 9 103 6.5 2.0 4.2 1.7 133 chr2L 17158728 5` UTR,exon CG34106 +,beat-IIIa + chr2L 17158794 intron,intron CG34106 +,beat-IIIa + chr2L 17158861 intron,intron CG34106 +,beat-IIIa + chr2L_9_17155001 chr2L_17155001 D4-c1 434 chr2L 17167567 17167596 chr2L 17167809 17167838 pogo 15 242 4.5 4.5 4.5 2.7 271 chr2L 17167567 intron,intron CG34106 +,beat-IIIa + chr2L 17167702 intron,intron CG34106 +,beat-IIIa + chr2L 17167838 intron,intron CG34106 +,beat-IIIa + chr2L_15_17165001 chr2L_17165001 D4-c1 435 chr2L 17169067 17169101 chr2L 17169154 17169188 13 87 4.5 7.5 6.0 1.9 121 chr2L 17169067 intron,intron CG34106 +,beat-IIIa + chr2L 17169128 intron,intron CG34106 +,beat-IIIa + chr2L 17169188 intron,intron CG34106 +,beat-IIIa + chr2L_13_17165001 chr2L_17165001 D4-c1 436 chr2L 17187445 17187473 chr2L 17187617 17187645 8 172 2.5 1.5 2.0 2.7 200 chr2L 17187445 intergenic beat-IIIc - chr2L 17187545 intergenic beat-IIIc - chr2L 17187645 3` UTR beat-IIIc - chr2L_8_17185001 chr2L_17185001 D4-c1 437 chr2L 17199158 17199189 chr2L 17200626 17200657 hobo 9 1468 3.5 4.5 4.0 1.8 1499 chr2L 17199158 intron beat-IIIc - chr2L 17199908 intron beat-IIIc - chr2L 17200657 intron beat-IIIc - chr2L_9_17195001 chr2L_17195001 D4-c1 438 chr2L 17234714 17234754 chr2L 17234821 17234861 7 107 3.0 5.5 4.2 1.3 147 chr2L 17234714 intron beat-IIIc - chr2L 17234788 intron beat-IIIc - chr2L 17234861 intron beat-IIIc - chr2L_7_17230001 chr2L_17230001 D4-c1 439 chr2L 17239192 17239217 chr2L 17239277 17239302 13 85 6.0 5.0 5.5 2.0 110 chr2L 17239192 intron beat-IIIc - chr2L 17239247 intron beat-IIIc - chr2L 17239302 intron beat-IIIc - chr2L_13_17235001 chr2L_17235001 D4-c1 440 chr2L 17273191 17273223 chr2L 17277975 17278007 F-element 15 4783 3.5 4.5 4.0 3.0 4816 chr2L 17273191 intergenic not near genes chr2L 17275599 intergenic not near genes chr2L 17278007 intergenic not near genes chr2L_15_17275001 chr2L_17275001 D4-c1 441 chr2L 17327906 17327928 chr2L 17327993 17328015 11 87 5.0 10.5 7.8 1.2 109 chr2L 17327906 intergenic not near genes chr2L 17327960 intergenic not near genes chr2L 17328015 intergenic not near genes chr2L_11_17325001 chr2L_17325001 D4-c1 442 chr2L 17328754 17328786 chr2L 17329045 17329077 13 291 4.5 3.0 3.8 2.7 323 chr2L 17328754 intergenic not near genes chr2L 17328916 intergenic not near genes chr2L 17329077 intergenic not near genes chr2L_13_17325001 chr2L_17325001 D4-c1 443 chr2L 17329069 17329106 chr2L 17329198 17329235 19 129 2.5 3.0 2.8 5.0 166 chr2L 17329069 intergenic not near genes chr2L 17329152 intergenic not near genes chr2L 17329235 intergenic not near genes chr2L_19_17325001 chr2L_17325001 D4-c1 444 chr2L 17337321 17337352 chr2L 17337412 17337444 5 92 2.5 4.5 3.5 1.1 123 chr2L 17337321 intergenic not near genes chr2L 17337382 intergenic not near genes chr2L 17337444 intergenic not near genes chr2L_5_17335001 chr2L_17335001 D4-c1 445 chr2L 17405368 17405401 chr2L 17405484 17405517 15 116 16.0 23.0 19.5 0.7 149 chr2L 17405368 exon CLIP-190 + chr2L 17405442 intron CLIP-190 + chr2L 17405517 exon CLIP-190 + chr2L_15_17405001 chr2L_17405001 D4-c1 446 chr2L 17432630 17432667 chr2L 17432708 17432745 12 77 4.0 4.5 4.2 2.3 115 chr2L 17432630 intron Dif - chr2L 17432688 intron Dif - chr2L 17432745 intron Dif - chr2L_12_17430001 chr2L_17430001 D4-c1 447 chr2L 17456396 17456414 chr2L 17456489 17456504 6 92 1.5 0.0 0.8 3.3 108 chr2L 17456396 intron CG5050 + chr2L 17456450 intron CG5050 + chr2L 17456504 intron CG5050 + chr2L_6_17455001 chr2L_17455001 D4-c1 448 chr2L 17517855 17517875 chr2L 17517939 17517959 9 84 7.0 1.5 4.2 1.7 104 chr2L 17517855 intron Dhc36C + chr2L 17517907 intron Dhc36C + chr2L 17517959 intron Dhc36C + chr2L_9_17515001 chr2L_17515001 D4-c1 449 chr2L 17580897 17580926 chr2L 17581752 17581781 9 855 2.0 1.5 1.8 3.2 884 chr2L 17580897 intergenic not near genes chr2L 17581339 intergenic not near genes chr2L 17581781 intergenic not near genes chr2L_9_17580001 chr2L_17580001 D4-c1 450 chr2L 17594383 17594414 chr2L 17594481 17594511 10 98 3.0 2.0 2.5 2.9 128 chr2L 17594383 intron Sytalpha + chr2L 17594447 intron Sytalpha + chr2L 17594511 intron Sytalpha + chr2L_10_17590001 chr2L_17590001 D4-c1 451 chr2L 17607472 17607481 chr2L 17607571 17607580 5 99 6.0 3.0 4.5 0.9 108 chr2L 17607472 intergenic CR44412 - chr2L 17607526 intergenic CR44412 - chr2L 17607580 intergenic CR44412 - chr2L_5_17605001 chr2L_17605001 D4-c1 452 chr2L 17616493 17616500 chr2L 17616580 17616587 6 87 2.0 5.0 3.5 1.3 94 chr2L 17616493 intergenic not near genes chr2L 17616540 intergenic not near genes chr2L 17616587 intergenic not near genes chr2L_6_17615001 chr2L_17615001 D4-c1 453 chr2L 17671884 17671906 chr2L 17724391 17724414 5 52503 14.0 17.5 15.8 0.3 52530 chr2L 17671884 intron CadN - chr2L 17698149 intron CadN - chr2L 17724414 intron CadN - chr2L_5_17695001 chr2L_17695001 D4-c1 454 chr2L 17705752 17705756 chr2L 17705853 17705857 5 101 0.0 0.5 0.2 4.2 105 chr2L 17705752 intron,3` UTR CadN -,CG43231 + chr2L 17705804 intron,3` UTR CadN -,CG43231 + chr2L 17705857 intron,intron CadN -,CG43231 + chr2L_5_17705001 chr2L_17705001 D4-c1 455 chr2L 17718383 17718415 chr2L 17718489 17718517 16 105 4.0 9.5 6.8 2.1 134 chr2L 17718383 intron CadN - chr2L 17718450 intron CadN - chr2L 17718517 intron CadN - chr2L_16_17715001 chr2L_17715001 D4-c1 456 chr2L 17727871 17727882 chr2L 17729339 17729350 hobo 6 1467 3.5 8.5 6.0 0.9 1479 chr2L 17727871 intron CadN - chr2L 17728610 intron CadN - chr2L 17729350 intron CadN - chr2L_6_17725001 chr2L_17725001 D4-c1 457 chr2L 17759346 17759359 chr2L 17759441 17759454 6 95 4.5 1.0 2.8 1.6 108 chr2L 17759346 intron CadN - chr2L 17759400 intron CadN - chr2L 17759454 intron CadN - chr2L_6_17755001 chr2L_17755001 D4-c1 458 chr2L 17811002 17811037 chr2L 17811091 17811126 13 89 4.0 3.5 3.8 2.7 124 chr2L 17811002 intron CadN2 - chr2L 17811064 intron CadN2 - chr2L 17811126 intron CadN2 - chr2L_13_17810001 chr2L_17810001 D4-c1 459 chr2L 17819920 17819956 chr2L 17825124 17825160 copia 16 5204 5.5 6.0 5.8 2.4 5240 chr2L 17819920 intron CadN2 - chr2L 17822540 intron CadN2 - chr2L 17825160 intron CadN2 - chr2L_16_17820001 chr2L_17820001 D4-c1 460 chr2L 17855493 17855529 chr2L 17855572 17855608 15 79 3.0 3.5 3.2 3.6 115 chr2L 17855493 intron CadN2 - chr2L 17855550 intron CadN2 - chr2L 17855608 intron CadN2 - chr2L_15_17855001 chr2L_17855001 D4-c1 461 chr2L 17911962 17911990 chr2L 17914140 17914169 pogo 16 2179 6.5 6.0 6.2 2.2 2207 chr2L 17911962 intergenic not near genes chr2L 17913066 intergenic not near genes chr2L 17914169 intergenic CG43271 - chr2L_16_17910001 chr2L_17910001 D4-c1 462 chr2L 17951947 17951980 chr2L 17953415 17953448 hobo 17 1468 4.5 6.0 5.2 2.7 1501 chr2L 17951947 intergenic CR44398 -,CR44397 - chr2L 17952698 intergenic not near genes chr2L 17953448 intergenic not near genes chr2L_17_17950001 chr2L_17950001 D4-c1 463 chr2L 17988360 17988390 chr2L 17991957 17991987 23 3597 31.0 39.0 35.0 0.6 3627 chr2L 17988360 3` UTR CG5681 + chr2L 17990174 intergenic Prosbeta5R2 + chr2L 17991987 intergenic Prosbeta5R2 + chr2L_23_17990001 chr2L_17990001 D4-c1 464 chr2L 18051874 18051906 chr2L 18061022 18061054 roo 12 9148 4.0 6.0 5.0 2.0 9180 chr2L 18051874 intron rdo + chr2L 18056464 intron rdo + chr2L 18061054 intron rdo + chr2L_12_18055001 chr2L_18055001 D4-c1 465 chr2L 18103036 18103071 chr2L 18103124 18103159 21 86 4.5 5.0 4.8 3.6 123 chr2L 18103036 intergenic not near genes chr2L 18103098 intergenic not near genes chr2L 18103159 intergenic not near genes chr2L_21_18100001 chr2L_18100001 D4-c1 466 chr2L 18235060 18235098 chr2L 18235193 18235231 30 130 9.0 9.5 9.2 2.9 171 chr2L 18235060 intron CG42750 - chr2L 18235146 intron CG42750 - chr2L 18235231 intron CG42750 - chr2L_30_18235001 chr2L_18235001 D4-c1 467 chr2L 18298933 18298939 chr2L 18299011 18299017 4 78 11.5 4.0 7.8 0.5 84 chr2L 18298933 intergenic not near genes chr2L 18298975 intergenic not near genes chr2L 18299017 intergenic not near genes chr2L_4_18295001 chr2L_18295001 D4-c1 468 chr2L 18298940 18298962 chr2L 18299007 18299019 15 73 4.5 3.0 3.8 3.1 79 chr2L 18298940 intergenic not near genes chr2L 18298980 intergenic not near genes chr2L 18299019 intergenic not near genes chr2L_15_18295001 chr2L_18295001 D4-c1 469 chr2L 18339832 18339860 chr2L 18341064 18341092 6 1232 8.5 18.5 13.5 0.4 1260 chr2L 18339832 intron Fas3 + chr2L 18340462 intron Fas3 + chr2L 18341092 intron Fas3 + chr2L_6_18340001 chr2L_18340001 D4-c1 470 chr2L 18366154 18366188 chr2L 18366231 18366265 10 77 3.5 4.0 3.8 2.1 111 chr2L 18366154 intron Fas3 + chr2L 18366210 intron Fas3 + chr2L 18366265 intron Fas3 + chr2L_10_18365001 chr2L_18365001 D4-c1 471 chr2L 18408022 18408052 chr2L 18412807 18412837 Doc 14 4785 5.5 0.0 2.8 3.7 4815 chr2L 18408022 intergenic not near genes chr2L 18410430 intergenic not near genes chr2L 18412837 intergenic not near genes chr2L_14_18410001 chr2L_18410001 D4-c1 472 chr2L 18440323 18440356 chr2L 18440430 18440463 16 107 3.0 5.0 4.0 3.2 140 chr2L 18440323 intergenic not near genes chr2L 18440393 intergenic not near genes chr2L 18440463 intergenic not near genes chr2L_16_18440001 chr2L_18440001 D4-c1 473 chr2L 18443860 18443887 chr2L 18443941 18443968 4 81 0.0 3.0 1.5 1.6 108 chr2L 18443860 intergenic not near genes chr2L 18443914 intergenic not near genes chr2L 18443968 intergenic not near genes chr2L_4_18440001 chr2L_18440001 D4-c1 474 chr2L 18546225 18546253 chr2L 18546310 18546340 16 87 5.0 4.5 4.8 2.8 115 chr2L 18546225 intron Pde11 - chr2L 18546282 intron Pde11 - chr2L 18546340 intron Pde11 - chr2L_16_18545001 chr2L_18545001 D4-c1 475 chr2L 18630798 18630822 chr2L 18630880 18630904 10 82 6.5 4.5 5.5 1.5 106 chr2L 18630798 intron MESR3 + chr2L 18630851 intron MESR3 + chr2L 18630904 intron MESR3 + chr2L_10_18630001 chr2L_18630001 D4-c1 476 chr2L 18745140 18745171 chr2L 18745228 18745259 16 88 4.5 3.0 3.8 3.3 119 chr2L 18745140 intergenic not near genes chr2L 18745200 intergenic not near genes chr2L 18745259 intergenic not near genes chr2L_16_18745001 chr2L_18745001 D4-c1 477 chr2L 18766229 18766248 chr2L 18766307 18766333 9 84 8.0 2.0 5.0 1.5 104 chr2L 18766229 intron ham - chr2L 18766281 intron ham - chr2L 18766333 intron ham - chr2L_9_18765001 chr2L_18765001 D4-c1 478 chr2L 18811420 18811438 chr2L 18811503 18811521 5 83 4.0 0.0 2.0 1.7 101 chr2L 18811420 intergenic CG10570 -,CG42502 - chr2L 18811470 intergenic CG10570 -,CG42502 - chr2L 18811521 intergenic not near genes chr2L_5_18810001 chr2L_18810001 D4-c1 479 chr2L 18812555 18812590 chr2L 18812819 18812854 15 264 2.5 5.0 3.8 3.1 299 chr2L 18812555 intergenic CG17325 +,CG42305 + chr2L 18812704 5` UTR,5` UTR CG17325 +,CG42305 + chr2L 18812854 5` UTR,5` UTR CG17325 +,CG42305 + chr2L_15_18810001 chr2L_18810001 D4-c1 480 chr2L 18816838 18816871 chr2L 18817042 18817075 13 205 43.5 38.0 40.8 0.3 237 chr2L 18816838 intergenic not near genes chr2L 18816956 intergenic not near genes chr2L 18817075 intergenic not near genes chr2L_13_18815001 chr2L_18815001 D4-c1 481 chr2L 18833709 18833727 chr2L 18833846 18833864 12 137 4.0 3.0 3.5 2.7 155 chr2L 18833709 3` UTR CG10600 - chr2L 18833786 3` UTR CG10600 - chr2L 18833864 3` UTR CG10600 - chr2L_12_18830001 chr2L_18830001 D4-c1 482 chr2L 18883851 18883888 chr2L 18883934 18883971 11 83 2.5 2.5 2.5 3.1 120 chr2L 18883851 intergenic not near genes chr2L 18883911 intergenic not near genes chr2L 18883971 intergenic not near genes chr2L_11_18880001 chr2L_18880001 D4-c1 483 chr2L 18898394 18898428 chr2L 18898477 18898511 23 83 5.0 5.5 5.2 3.7 117 chr2L 18898394 intergenic not near genes chr2L 18898452 intergenic not near genes chr2L 18898511 intergenic not near genes chr2L_23_18895001 chr2L_18895001 D4-c1 484 chr2L 18902625 18902657 chr2L 18902907 18902939 10 281 5.0 3.5 4.2 1.9 314 chr2L 18902625 intergenic not near genes chr2L 18902782 intergenic not near genes chr2L 18902939 intergenic not near genes chr2L_10_18900001 chr2L_18900001 D4-c1 485 chr2L 18996007 18996028 chr2L 18996097 18996118 9 90 10.0 8.5 9.2 0.9 111 chr2L 18996007 intergenic CG10650 - chr2L 18996062 intergenic CG10650 - chr2L 18996118 intergenic CG10650 - chr2L_9_18995001 chr2L_18995001 D4-c1 486 chr2L 19016825 19016862 chr2L 19017086 19017123 13 255 18.5 12.0 15.2 0.8 298 chr2L 19016825 intergenic not near genes chr2L 19016974 intergenic not near genes chr2L 19017123 intergenic not near genes chr2L_13_19015001 chr2L_19015001 D4-c1 487 chr2L 19024096 19024097 chr2L 21768291 21768291 13 2744194 32.5 27.0 29.8 0.4 2744195 chr2L 19024096 3` UTR CR43700 - chr2L 20396194 intron CG10947 - chr2L 21768291 intron CG31612 - chr2L_13_20395001 chr2L_20395001 D4-c1 488 chr2L 19070268 19070293 chr2L 19070362 19070387 5 94 15.5 10.0 12.8 0.4 119 chr2L 19070268 intergenic CG10702 - chr2L 19070328 intergenic CG10702 - chr2L 19070387 intergenic not near genes chr2L_5_19070001 chr2L_19070001 D4-c1 489 chr2L 19144929 19145196 chr2L 19145008 19145284 11 81 10.0 14.5 12.2 0.8 355 chr2L 19144929 intron brat + chr2L 19145106 intron brat + chr2L 19145284 intron brat + chr2L_11_19145001 chr2L_19145001 D4-c1 490 chr2L 19147367 19147402 chr2L 19154403 19154438 297 13 7036 4.5 4.0 4.2 2.5 7071 chr2L 19147367 intron brat + chr2L 19150902 intron brat + chr2L 19154438 intron brat + chr2L_13_19150001 chr2L_19150001 D4-c1 491 chr2L 19214586 19214603 chr2L 19214667 19214685 6 82 6.0 8.5 7.2 0.7 99 chr2L 19214586 intergenic not near genes chr2L 19214636 intergenic not near genes chr2L 19214685 intergenic not near genes chr2L_6_19210001 chr2L_19210001 D4-c1 492 chr2L 19308962 19308987 chr2L 19309036 19309074 7 85 21.0 22.0 21.5 0.3 112 chr2L 19308962 intergenic not near genes chr2L 19309018 intergenic not near genes chr2L 19309074 intergenic not near genes chr2L_7_19305001 chr2L_19305001 D4-c1 493 chr2L 19309617 19309652 chr2L 19309698 19309733 8 80 16.0 15.5 15.8 0.5 116 chr2L 19309617 intergenic not near genes chr2L 19309675 intergenic not near genes chr2L 19309733 intergenic not near genes chr2L_8_19305001 chr2L_19305001 D4-c1 494 chr2L 19316197 19316221 chr2L 19316275 19316299 10 78 8.5 6.5 7.5 1.2 102 chr2L 19316197 intergenic not near genes chr2L 19316248 intergenic not near genes chr2L 19316299 intergenic not near genes chr2L_10_19315001 chr2L_19315001 D4-c1 495 chr2L 19345013 19345050 chr2L 19357221 19357260 blood 15 12210 5.0 5.5 5.2 2.4 12247 chr2L 19345013 intron dnt - chr2L 19351136 intron dnt - chr2L 19357260 intron dnt - chr2L_15_19350001 chr2L_19350001 D4-c1 496 chr2L 19357544 19357567 chr2L 19357635 19357658 19 91 5.5 9.5 7.5 2.2 114 chr2L 19357544 intron dnt - chr2L 19357601 intron dnt - chr2L 19357658 intron dnt - chr2L_19_19355001 chr2L_19355001 D4-c1 497 chr2L 19374494 19374520 chr2L 19374604 19374630 4 110 13.0 14.5 13.8 0.3 136 chr2L 19374494 intergenic not near genes chr2L 19374562 intergenic not near genes chr2L 19374630 intergenic not near genes chr2L_4_19370001 chr2L_19370001 D4-c1 498 chr2L 19379212 19379231 chr2L 19379353 19379372 6 141 12.0 11.0 11.5 0.5 160 chr2L 19379212 intergenic not near genes chr2L 19379292 intergenic not near genes chr2L 19379372 intergenic not near genes chr2L_6_19375001 chr2L_19375001 D4-c1 499 chr2L 19383993 19384022 chr2L 19384095 19384124 10 102 20.0 23.5 21.8 0.4 131 chr2L 19383993 exon fon - chr2L 19384058 exon fon - chr2L 19384124 exon fon - chr2L_10_19380001 chr2L_19380001 D4-c1 500 chr2L 19393960 19393995 chr2L 19394075 19394110 10 115 13.5 14.5 14.0 0.7 150 chr2L 19393960 intron CG17544 - chr2L 19394035 intron CG17544 - chr2L 19394110 intron CG17544 - chr2L_10_19390001 chr2L_19390001 D4-c1 501 chr2L 19405616 19405641 chr2L 19405707 19405732 16 91 3.0 2.5 2.8 4.2 116 chr2L 19405616 intron Pax - chr2L 19405674 intron Pax - chr2L 19405732 intron Pax - chr2L_16_19405001 chr2L_19405001 D4-c1 502 chr2L 19489634 19489657 chr2L 19490463 19490486 8 830 36.5 24.0 30.2 0.3 852 chr2L 19489634 exon CG10194 - chr2L 19490060 exon CG10194 - chr2L 19490486 exon CG18094 + chr2L_8_19490001 chr2L_19490001 D4-c1 503 chr2L 19558519 19558548 chr2L 19558624 19558653 6 105 6.0 7.5 6.8 0.8 134 chr2L 19558519 intron Tep5 + chr2L 19558586 intron Tep5 + chr2L 19558653 intron Tep5 + chr2L_6_19555001 chr2L_19555001 D4-c1 504 chr2L 19560025 19560039 chr2L 19560278 19560292 6 253 23.5 21.5 22.5 0.3 267 chr2L 19560025 exon Tep5 + chr2L 19560158 exon Tep5 + chr2L 19560292 intron Tep5 + chr2L_6_19560001 chr2L_19560001 D4-c1 505 chr2L 19561342 19561365 chr2L 19561484 19561507 5 142 12.0 12.0 12.0 0.4 165 chr2L 19561342 exon Tep5 + chr2L 19561424 exon Tep5 + chr2L 19561507 exon Tep5 + chr2L_5_19560001 chr2L_19560001 D4-c1 506 chr2L 19562529 19562559 chr2L 19562610 19562640 6 80 14.5 17.5 16.0 0.4 111 chr2L 19562529 exon Tep5 + chr2L 19562584 intron Tep5 + chr2L 19562640 exon Tep5 + chr2L_6_19560001 chr2L_19560001 D4-c1 507 chr2L 19601576 19601597 chr2L 19601654 19601675 4 78 10.0 11.5 10.8 0.3 99 chr2L 19601576 intron,intron Lar +,CR44978 - chr2L 19601626 intron,intron Lar +,CR44978 - chr2L 19601675 intron,intron Lar +,CR44978 - chr2L_4_19600001 chr2L_19600001 D4-c1 508 chr2L 19620088 19620129 chr2L 19621078 19621119 jockey 17 990 6.5 4.5 5.5 2.6 1031 chr2L 19620088 intron Lar + chr2L 19620604 intron Lar + chr2L 19621119 intron Lar + chr2L_17_19620001 chr2L_19620001 D4-c1 509 chr2L 19652567 19652604 chr2L 19674004 19674041 opus 17 21437 2.0 4.0 3.0 4.2 21474 chr2L 19652567 intron Lar + chr2L 19663304 intron Lar + chr2L 19674041 intron Lar + chr2L_17_19660001 chr2L_19660001 D4-c1 510 chr2L 19683359 19683390 chr2L 19683814 19683845 18 455 16.0 14.0 15.0 1.1 486 chr2L 19683359 intron Lar + chr2L 19683602 intron Lar + chr2L 19683845 intron Lar + chr2L_18_19680001 chr2L_19680001 D4-c1 511 chr2L 19703536 19703568 chr2L 19712673 19712705 roo 16 9137 4.0 7.5 5.8 2.4 9169 chr2L 19703536 intron Lar + chr2L 19708120 intron Lar + chr2L 19712705 intron Lar + chr2L_16_19705001 chr2L_19705001 D4-c1 512 chr2L 19737357 19737388 chr2L 19740827 19740858 1360 15 3466 15.0 15.5 15.2 0.9 3501 chr2L 19737357 intergenic Nf-YB + chr2L 19739108 intergenic not near genes chr2L 19740858 intergenic not near genes chr2L_15_19735001 chr2L_19735001 D4-c1 513 chr2L 19742355 19742385 chr2L 19742441 19742471 8 86 16.0 18.0 17.0 0.4 116 chr2L 19742355 intergenic CG10631 - chr2L 19742413 intergenic CG10631 - chr2L 19742471 intergenic CG10631 - chr2L_8_19740001 chr2L_19740001 D4-c1 514 chr2L 19762814 19762839 chr2L 19763057 19763082 pogo 11 243 3.5 5.5 4.5 2.0 268 chr2L 19762814 5` UTR fbp - chr2L 19762948 intron fbp - chr2L 19763082 intron fbp - chr2L_11_19760001 chr2L_19760001 D4-c1 515 chr2L 19773163 19773190 chr2L 19773251 19773278 15 88 5.0 4.5 4.8 2.6 115 chr2L 19773163 intergenic not near genes chr2L 19773220 intergenic not near genes chr2L 19773278 intergenic not near genes chr2L_15_19770001 chr2L_19770001 D4-c1 516 chr2L 19778561 19778585 chr2L 19778642 19778666 13 81 22.0 22.5 22.2 0.6 105 chr2L 19778561 exon CdGAPr - chr2L 19778614 exon CdGAPr - chr2L 19778666 exon CdGAPr - chr2L_13_19775001 chr2L_19775001 D4-c1 517 chr2L 19911289 19911325 chr2L 19911378 19911414 16 89 21.5 18.5 20.0 0.8 125 chr2L 19911289 intron,3` UTR sick +,CR43097 - chr2L 19911352 intron,3` UTR sick +,CR43097 - chr2L 19911414 intron,3` UTR sick +,CR43097 - chr2L_16_19910001 chr2L_19910001 D4-c1 518 chr2L 19913067 19913081 chr2L 19913514 19913522 4 446 16.0 11.5 13.8 0.3 455 chr2L 19913067 intron,exon sick +,Victoria - chr2L 19913294 intron,exon sick +,Victoria - chr2L 19913522 intron sick + chr2L_4_19910001 chr2L_19910001 D4-c1 519 chr2L 20005875 20005903 chr2L 20010952 20010980 flea 15 5077 9.0 7.5 8.2 1.6 5105 chr2L 20005875 intron CG43861 - chr2L 20008428 intron CG43861 - chr2L 20010980 intron CG43861 - chr2L_15_20005001 chr2L_20005001 D4-c1 520 chr2L 20041428 20041459 chr2L 20041514 20041545 5 86 23.5 21.5 22.5 0.2 117 chr2L 20041428 intron sNPF + chr2L 20041486 intron sNPF + chr2L 20041545 intron sNPF + chr2L_5_20040001 chr2L_20040001 D4-c1 521 chr2L 20079522 20079545 chr2L 20079644 20079667 5 122 7.5 6.0 6.8 0.6 145 chr2L 20079522 intron,intron neb +,fok - chr2L 20079594 intron,intron neb +,fok - chr2L 20079667 intron,intron neb +,fok - chr2L_5_20075001 chr2L_20075001 D4-c1 522 chr2L 20079872 20079897 chr2L 20079996 20080021 8 124 6.5 6.0 6.2 1.1 149 chr2L 20079872 intron,intron neb +,fok - chr2L 20079946 intron,intron neb +,fok - chr2L 20080021 intron,intron neb +,fok - chr2L_8_20075001 chr2L_20075001 D4-c1 523 chr2L 20272111 20272143 chr2L 20282823 20282855 copia 13 10712 8.0 9.5 8.8 1.3 10744 chr2L 20272111 intergenic not near genes chr2L 20277483 intergenic not near genes chr2L 20282855 intergenic not near genes chr2L_13_20275001 chr2L_20275001 D4-c1 524 chr2L 20296506 20296539 chr2L 20296588 20296621 10 82 2.0 3.5 2.8 2.6 115 chr2L 20296506 intergenic CR43414 - chr2L 20296564 intergenic CR43414 - chr2L 20296621 intergenic CR43414 - chr2L_10_20295001 chr2L_20295001 D4-c1 525 chr2L 20303161 20303188 chr2L 20310630 20310657 blood 6 7469 2.5 2.0 2.2 1.9 7496 chr2L 20303161 intergenic not near genes chr2L 20306909 intergenic not near genes chr2L 20310657 intergenic not near genes chr2L_6_20305001 chr2L_20305001 D4-c1 526 chr2L 20322635 20322666 chr2L 20322719 20322750 11 83 13.0 11.5 12.2 0.8 115 chr2L 20322635 intron spir + chr2L 20322692 intron spir + chr2L 20322750 intron spir + chr2L_11_20320001 chr2L_20320001 D4-c1 527 chr2L 20372227 20372243 chr2L 20372469 20372485 pogo 6 242 1.5 5.5 3.5 1.3 258 chr2L 20372227 intergenic Ugt37a1 - chr2L 20372356 intergenic Ugt37a1 - chr2L 20372485 exon Ugt37a1 - chr2L_6_20370001 chr2L_20370001 D4-c1 528 chr2L 20396803 20396824 chr2L 20396880 20396901 5 77 17.0 10.5 13.8 0.3 98 chr2L 20396803 intron CG10947 - chr2L 20396852 intron CG10947 - chr2L 20396901 intron CG10947 - chr2L_5_20395001 chr2L_20395001 D4-c1 529 chr2L 20498687 20498706 chr2L 20498787 20498806 7 100 8.0 6.5 7.2 0.9 119 chr2L 20498687 intergenic not near genes chr2L 20498746 intergenic not near genes chr2L 20498806 intergenic not near genes chr2L_7_20495001 chr2L_20495001 D4-c1 530 chr2L 20568659 20568687 chr2L 20569050 20569078 X-element 13 391 0.5 4.5 2.5 3.7 419 chr2L 20568659 intron CR45347 + chr2L 20568868 intron CR45347 + chr2L 20569078 intron CR45347 + chr2L_13_20565001 chr2L_20565001 D4-c1 531 chr2L 20576221 20576252 chr2L 20583690 20583721 blood 13 7469 2.0 4.0 3.0 3.2 7500 chr2L 20576221 intergenic not near genes chr2L 20579971 intergenic not near genes chr2L 20583721 3` UTR CR44909 - chr2L_13_20575001 chr2L_20575001 D4-c1 532 chr2L 20601786 20601809 chr2L 20601865 20601888 6 79 5.0 5.0 5.0 1.0 102 chr2L 20601786 intron CR44909 - chr2L 20601837 intron CR44909 - chr2L 20601888 intron CR44909 - chr2L_6_20600001 chr2L_20600001 D4-c1 533 chr2L 20611243 20611266 chr2L 20611333 20611356 5 90 9.5 9.0 9.2 0.5 113 chr2L 20611243 intron CR44909 - chr2L 20611300 intron CR44909 - chr2L 20611356 intron CR44909 - chr2L_5_20610001 chr2L_20610001 D4-c1 534 chr2L 20639510 20639530 chr2L 20639787 20639807 INE-1 8 276 15.5 12.5 14.0 0.5 297 chr2L 20639510 intergenic not near genes chr2L 20639658 intergenic CG31680 + chr2L 20639807 intergenic CG31680 + chr2L_8_20635001 chr2L_20635001 D4-c1 535 chr2L 20668695 20668710 chr2L 20668772 20668787 7 77 19.5 16.5 18.0 0.4 92 chr2L 20668695 intron CG31678 - chr2L 20668741 intron CG31678 - chr2L 20668787 intron CG31678 - chr2L_7_20665001 chr2L_20665001 D4-c1 536 chr2L 20695799 20695823 chr2L 20695888 20695912 5 88 12.0 13.5 12.8 0.4 113 chr2L 20695799 intron Hr38 - chr2L 20695856 intron Hr38 - chr2L 20695912 intron Hr38 - chr2L_5_20695001 chr2L_20695001 D4-c1 537 chr2L 20711684 20711714 chr2L 20711775 20711805 6 91 13.0 12.5 12.8 0.4 121 chr2L 20711684 intron,5` UTR Hr38 -,CR44188 + chr2L 20711744 intron,5` UTR Hr38 -,CR44188 + chr2L 20711805 intron,5` UTR Hr38 -,CR44188 + chr2L_6_20710001 chr2L_20710001 D4-c1 538 chr2L 20801658 20801691 chr2L 20801739 20801771 7 80 10.5 8.0 9.2 0.7 113 chr2L 20801658 intron CG9328 + chr2L 20801714 intron CG9328 + chr2L 20801771 intron CG9328 + chr2L_7_20800001 chr2L_20800001 D4-c1 539 chr2L 20819111 20819130 chr2L 20819196 20819215 8 85 16.0 14.0 15.0 0.5 104 chr2L 20819111 intergenic not near genes chr2L 20819163 intergenic not near genes chr2L 20819215 intergenic not near genes chr2L_8_20815001 chr2L_20815001 D4-c1 540 chr2L 20821498 20821510 chr2L 20821647 20821659 4 149 12.0 22.5 17.2 0.2 161 chr2L 20821498 intergenic not near genes chr2L 20821578 intergenic not near genes chr2L 20821659 intergenic not near genes chr2L_4_20820001 chr2L_20820001 D4-c1 541 chr2L 5906990 5906992 chr2L 20824644 20824646 4 14917654 16.0 19.5 17.8 0.2 14917656 chr2L 5906990 intergenic bchs + chr2L 13365818 exon Nnp-1 - chr2L 20824646 intron CG9331 + chr2L_4_13365001 chr2L_13365001 D4-c1 542 chr2L 20826522 20826544 chr2L 20826599 20826625 7 80 14.0 15.0 14.5 0.5 103 chr2L 20826522 intron CG9331 + chr2L 20826574 intron CG9331 + chr2L 20826625 intron CG9331 + chr2L_7_20825001 chr2L_20825001 D4-c1 543 chr2L 20835810 20835841 chr2L 20836528 20836559 Quasimodo 7 718 9.0 14.0 11.5 0.6 749 chr2L 20835810 5` UTR Oseg5 - chr2L 20836184 intergenic Oseg5 -,Spn38F - chr2L 20836559 intergenic Spn38F - chr2L_7_20835001 chr2L_20835001 D4-c1 544 chr2L 20840024 20840059 chr2L 20840237 20840272 18 213 6.0 2.0 4.0 3.6 248 chr2L 20840024 intergenic not near genes chr2L 20840148 intergenic not near genes chr2L 20840272 intergenic CG31676 + chr2L_18_20840001 chr2L_20840001 D4-c1 545 chr2L 20862585 20862595 chr2L 20862683 20862693 4 98 13.0 11.5 12.2 0.3 108 chr2L 20862585 intergenic not near genes chr2L 20862639 intergenic not near genes chr2L 20862693 intergenic not near genes chr2L_4_20860001 chr2L_20860001 D4-c1 546 chr2L 20891535 20891545 chr2L 20896637 20896647 jockey 4 5102 3.0 4.5 3.8 0.8 5112 chr2L 20891535 intron,intron CG43739 -,sky - chr2L 20894091 intron,intron CG43739 -,sky - chr2L 20896647 intron,intron CG43739 -,sky - chr2L_4_20890001 chr2L_20890001 D4-c1 547 chr2L 20911028 20911060 chr2L 20911105 20911137 12 77 16.0 15.0 15.5 0.7 109 chr2L 20911028 intron,intron CG43739 -,sky - chr2L 20911082 intron,intron CG43739 -,sky - chr2L 20911137 intron,intron CG43739 -,sky - chr2L_12_20910001 chr2L_20910001 D4-c1 548 chr2L 20934442 20934636 chr2L 20934562 20934832 8 186 9.5 14.0 11.8 0.6 390 chr2L 20934442 intergenic CG9270 - chr2L 20934637 intergenic not near genes chr2L 20934832 intergenic not near genes chr2L_8_20930001 chr2L_20930001 D4-c1 549 chr2L 20946948 20946962 chr2L 20947036 20947050 9 88 8.0 8.0 8.0 1.0 102 chr2L 20946948 intergenic CR44606 - chr2L 20946999 intergenic CR44606 - chr2L 20947050 intergenic CR44606 - chr2L_9_20945001 chr2L_20945001 D4-c1 550 chr2L 20967087 20967108 chr2L 20967174 20967195 9 87 5.5 8.0 6.8 1.2 108 chr2L 20967087 3` UTR CG42238 - chr2L 20967141 3` UTR CG42238 - chr2L 20967195 3` UTR CG42238 - chr2L_9_20965001 chr2L_20965001 D4-c1 551 chr2L 20976640 20976679 chr2L 20981456 20981495 X-element 14 4816 3.5 6.0 4.8 2.4 4855 chr2L 20976640 intron CG42238 - chr2L 20979068 intron CG42238 - chr2L 20981495 intron CG42238 - chr2L_14_20975001 chr2L_20975001 D4-c1 552 chr2L 20984394 20984427 chr2L 20984681 20984714 7 287 9.0 11.5 10.2 0.6 320 chr2L 20984394 intron CG42238 - chr2L 20984554 intron CG42238 - chr2L 20984714 intron CG42238 - chr2L_7_20980001 chr2L_20980001 D4-c1 553 chr2L 20991036 20991060 chr2L 20991115 20991139 14 79 7.0 5.0 6.0 2.0 103 chr2L 20991036 intron CG42238 - chr2L 20991088 intron CG42238 - chr2L 20991139 intron CG42238 - chr2L_14_20990001 chr2L_20990001 D4-c1 554 chr2L 21020271 21020310 chr2L 21023949 21023988 NOF 16 3678 4.5 5.5 5.0 2.7 3717 chr2L 21020271 intron CG42238 - chr2L 21022130 intron CG42238 - chr2L 21023988 intron CG42238 - chr2L_16_21020001 chr2L_21020001 D4-c1 555 chr2L 21041135 21041167 chr2L 21049397 21049429 Tirant 15 8262 4.5 3.5 4.0 3.0 8294 chr2L 21041135 intron CG42238 - chr2L 21045282 intron CG42238 - chr2L 21049429 intron CG42238 - chr2L_15_21045001 chr2L_21045001 D4-c1 556 chr2L 21074919 21074951 chr2L 21075011 21075043 12 92 1.5 2.0 1.8 4.3 124 chr2L 21074919 intergenic tadr + chr2L 21074981 intergenic tadr + chr2L 21075043 intergenic tadr + chr2L_12_21070001 chr2L_21070001 D4-c1 557 chr2L 21086426 21086455 chr2L 21086542 21086571 11 115 4.5 6.0 5.2 1.8 145 chr2L 21086426 5` UTR CG33509 - chr2L 21086498 5` UTR CG33509 - chr2L 21086571 intergenic CG33509 -,ppk13 - chr2L_11_21085001 chr2L_21085001 D4-c1 558 chr2L 21088920 21088948 chr2L 21089004 21089032 10 83 4.5 4.5 4.5 1.8 112 chr2L 21088920 intergenic ppk13 -,CG9259 + chr2L 21088976 intergenic ppk13 -,CG9259 + chr2L 21089032 intergenic ppk13 -,CG9259 + chr2L_10_21085001 chr2L_21085001 D4-c1 559 chr2L 21179215 21179238 chr2L 21179296 21179320 7 81 12.5 17.5 15.0 0.4 105 chr2L 21179215 intron,5` UTR bur -,CR44911 + chr2L 21179268 intron,5` UTR bur -,CR44911 + chr2L 21179320 intron,5` UTR bur -,CR44911 + chr2L_7_21175001 chr2L_21175001 D4-c1 560 chr2L 21347555 21347579 chr2L 21355028 21355048 blood 6 7472 4.0 2.5 3.2 1.4 7493 chr2L 21347555 intron Tsp39D + chr2L 21351302 intron Tsp39D + chr2L 21355048 intron Tsp39D + chr2L_6_21350001 chr2L_21350001 D4-c1 561 chr2L 21355606 21355638 chr2L 21355752 21355784 11 146 4.0 2.5 3.2 2.6 178 chr2L 21355606 intron Tsp39D + chr2L 21355695 intron Tsp39D + chr2L 21355784 intron Tsp39D + chr2L_11_21355001 chr2L_21355001 D4-c1 562 chr2L 21394381 21394397 chr2L 21394461 21394477 11 79 18.5 18.0 18.2 0.6 96 chr2L 21394381 intergenic not near genes chr2L 21394429 intergenic not near genes chr2L 21394477 intergenic not near genes chr2L_11_21390001 chr2L_21390001 D4-c1 563 chr2L 21597026 21597059 chr2L 21604771 21604803 roo 13 7744 3.0 3.5 3.2 3.1 7777 chr2L 21597026 intergenic not near genes chr2L 21600914 intergenic not near genes chr2L 21604803 intergenic not near genes chr2L_13_21600001 chr2L_21600001 D4-c1 564 chr2L 21612571 21612588 chr2L 21612685 21612709 5 120 10.5 14.0 12.2 0.4 138 chr2L 21612571 intergenic not near genes chr2L 21612640 intergenic not near genes chr2L 21612709 intergenic not near genes chr2L_5_21610001 chr2L_21610001 D4-c1 565 chr2L 21691828 21691856 chr2L 21698299 21698327 Burdock 7 6471 2.5 0.5 1.5 2.8 6499 chr2L 21691828 intron CG31619 + chr2L 21695078 intron CG31619 + chr2L 21698327 intron CG31619 + chr2L_7_21695001 chr2L_21695001 D4-c1 566 chr2L 21788736 21788766 chr2L 21788815 21788845 9 78 6.0 4.0 5.0 1.5 109 chr2L 21788736 intron CG31612 - chr2L 21788790 intron CG31612 - chr2L 21788845 intron CG31612 - chr2L_9_21785001 chr2L_21785001 D4-c1 567 chr2L 21799958 21799971 chr2L 21800057 21800070 9 97 1.5 6.5 4.0 1.8 112 chr2L 21799958 intergenic not near genes chr2L 21800014 intergenic not near genes chr2L 21800070 intergenic not near genes chr2L_9_21800001 chr2L_21800001 D4-c1 568 chr2L 21819327 21819360 chr2L 21819416 21819449 13 88 5.0 4.5 4.8 2.2 122 chr2L 21819327 intergenic CR44786 + chr2L 21819388 intergenic CR44786 + chr2L 21819449 intergenic CR44786 + chr2L_13_21815001 chr2L_21815001 D4-c1 569 chr2L 21855477 21855512 chr2L 21855564 21855600 9 88 2.0 5.5 3.8 1.9 123 chr2L 21855477 intron CR44917 + chr2L 21855538 intron CR44917 + chr2L 21855600 intron CR44917 + chr2L_9_21855001 chr2L_21855001 D4-c1 570 chr2L 21905068 21905099 chr2L 21905179 21905210 14 111 6.0 5.0 5.5 2.2 142 chr2L 21905068 intergenic not near genes chr2L 21905139 intergenic not near genes chr2L 21905210 intergenic not near genes chr2L_14_21905001 chr2L_21905001 D4-c1 571 chr2L 21905824 21905858 chr2L 21905931 21905965 9 107 3.0 2.0 2.5 2.6 141 chr2L 21905824 intergenic CG1428 + chr2L 21905894 intergenic CG1428 + chr2L 21905965 intergenic CG1428 + chr2L_9_21905001 chr2L_21905001 D4-c1 572 chr2L 21954220 21954255 chr2L 21954301 21954336 12 81 3.5 4.0 3.8 2.5 116 chr2L 21954220 intergenic not near genes chr2L 21954278 intergenic not near genes chr2L 21954336 intergenic not near genes chr2L_12_21950001 chr2L_21950001 D4-c1 573 chr2L 21981683 21981714 chr2L 21990849 21990880 roo 18 9164 6.5 7.0 6.8 2.3 9197 chr2L 21981683 exon CG2528 - chr2L 21986282 intron CG2528 - chr2L 21990880 exon CG2528 - chr2L_18_21985001 chr2L_21985001 D4-c1 574 chr2L 21996953 21996974 chr2L 21997035 21997056 10 82 4.5 3.5 4.0 2.0 103 chr2L 21996953 intergenic not near genes chr2L 21997004 intergenic not near genes chr2L 21997056 intergenic not near genes chr2L_10_21995001 chr2L_21995001 D4-c1 575 chr2L 22035976 22036010 chr2L 22036103 22036137 21 127 4.5 7.0 5.8 3.1 161 chr2L 22035976 intergenic not near genes chr2L 22036056 intergenic not near genes chr2L 22036137 intergenic not near genes chr2L_21_22035001 chr2L_22035001 D4-c1 576 chr2L 22049640 22049666 chr2L 22049755 22049781 9 115 1.0 4.5 2.8 2.4 141 chr2L 22049640 intergenic not near genes chr2L 22049710 intergenic not near genes chr2L 22049781 intergenic not near genes chr2L_9_22045001 chr2L_22045001 D4-c1 577 chr2L 22152839 22152871 chr2L 22152916 22152948 11 77 0.5 2.0 1.2 5.0 109 chr2L 22152839 intron CG42748 + chr2L 22152894 intron CG42748 + chr2L 22152948 intron CG42748 + chr2L_11_22150001 chr2L_22150001 D4-c1 578 chr2L 22178041 22178065 chr2L 22178127 22178151 12 86 4.5 4.5 4.5 2.2 110 chr2L 22178041 intron CG3635 + chr2L 22178096 intron CG3635 + chr2L 22178151 intron CG3635 + chr2L_12_22175001 chr2L_22175001 D4-c1 579 chr2L 22191974 22192059 chr2L 22192054 22192149 8 90 0.0 0.0 0.0 8.0 175 chr2L 22191974 intron Ir40a - chr2L 22192062 intron Ir40a - chr2L 22192149 intron Ir40a - chr2L_8_22190001 chr2L_22190001 D4-c1 580 chr2L 22197888 22197907 chr2L 22198088 22198107 5 200 2.5 1.5 2.0 1.7 219 chr2L 22197888 intron Ir40a - chr2L 22197998 intron Ir40a - chr2L 22198107 intron Ir40a - chr2L_5_22195001 chr2L_22195001 D4-c1 581 chr2L 22258618 22258648 chr2L 22260743 22260773 G6 11 2125 5.5 8.0 6.8 1.4 2155 chr2L 22258618 intergenic Tif-IA + chr2L 22259696 intergenic not near genes chr2L 22260773 intergenic not near genes chr2L_11_22255001 chr2L_22255001 D4-c1 582 chr2L 22318853 22318877 chr2L 22318927 22318957 11 79 5.0 5.5 5.2 1.8 104 chr2L 22318853 intron CG17018 + chr2L 22318905 intron CG17018 + chr2L 22318957 intron CG17018 + chr2L_11_22315001 chr2L_22315001 D4-c1 583 chr2L 22581968 22582002 chr2L 22583758 22583792 S-element 10 1790 1.5 4.5 3.0 2.5 1824 chr2L 22581968 intron CG17494 + chr2L 22582880 intron CG17494 + chr2L 22583792 intron CG17494 + chr2L_10_22580001 chr2L_22580001 D4-c1 584 chr2L 22674071 22674097 chr2L 22674149 22674175 7 78 3.0 4.0 3.5 1.6 104 chr2L 22674071 intron CG40006 - chr2L 22674123 intron CG40006 - chr2L 22674175 intron CG40006 - chr2L_7_22670001 chr2L_22670001 D4-c1 585 chr2L 22679801 22679821 chr2L 22684574 22684594 F-element 9 4773 4.5 6.0 5.2 1.5 4793 chr2L 22679801 intron CG40006 - chr2L 22682198 intron CG40006 - chr2L 22684594 intron CG40006 - chr2L_9_22680001 chr2L_22680001 D4-c1 586 chr2L 22696852 22696885 chr2L 22696935 22696968 16 81 6.0 6.5 6.2 2.2 116 chr2L 22696852 intron CG40006 - chr2L 22696910 intron CG40006 - chr2L 22696968 intron CG40006 - chr2L_16_22695001 chr2L_22695001 D4-c1 587 chr2L 22776418 22776451 chr2L 22778208 22778241 S-element 8 1790 3.0 4.0 3.5 1.8 1823 chr2L 22776418 intergenic not near genes chr2L 22777330 intergenic not near genes chr2L 22778241 intergenic not near genes chr2L_8_22775001 chr2L_22775001 D4-c1 588 chr2L 22983944 22983971 chr2L 22984021 22984048 12 77 1.5 3.0 2.2 3.8 104 chr2L 22983944 intron cta + chr2L 22983996 intron cta + chr2L 22984048 intron cta + chr2L_12_22980001 chr2L_22980001 D4-c1 589 chr2L 23006692 23006710 chr2L 23007000 23007018 Osvaldo 10 308 5.5 6.5 6.0 1.4 326 chr2L 23006692 intron Cht3 - chr2L 23006855 intron Cht3 - chr2L 23007018 intron Cht3 - chr2L_10_23005001 chr2L_23005001 D4-c1 590 chr2L 23168855 23168860 chr2L 23168932 23168937 4 77 6.5 7.5 7.0 0.5 82 chr2L 23168855 intron,5` UTR CG12567 -,mir-2490 + chr2L 23168896 intron,5` UTR CG12567 -,mir-2490 + chr2L 23168937 intron CG12567 - chr2L_4_23165001 chr2L_23165001 D4-c1 591 chr2R 469927 469933 chr2R 4141916 4141922 4 3671989 6.5 18.5 12.5 0.3 3671995 chr2R 469927 intergenic not near genes chr2R 2305924 intergenic not near genes chr2R 4141922 intergenic not near genes chr2R_4_2305001 chr2R_2305001 D4-c1 592 chr2R 529322 529357 chr2R 537948 537983 Max-element 11 8626 3.0 3.0 3.0 2.8 8661 chr2R 529322 intron CG40378 + chr2R 533652 intron CG40378 + chr2R 537983 intron CG40378 + chr2R_11_530001 chr2R_530001 D4-c1 593 chr2R 552750 552788 chr2R 553969 554007 1360 18 1215 2.5 6.0 4.2 3.5 1257 chr2R 552750 intron CG40378 + chr2R 553378 intron CG40378 + chr2R 554007 intron CG40378 + chr2R_18_550001 chr2R_550001 D4-c1 594 chr2R 672951 672980 chr2R 673029 673058 8 78 2.0 3.5 2.8 2.1 107 chr2R 672951 intergenic not near genes chr2R 673004 intergenic not near genes chr2R 673058 intergenic not near genes chr2R_8_670001 chr2R_670001 D4-c1 595 chr2R 1082367 1082385 chr2R 1087131 1087162 Doc 19 4775 9.5 7.5 8.5 2.0 4795 chr2R 1082367 intron rl + chr2R 1084764 intron rl + chr2R 1087162 intron rl + chr2R_19_1080001 chr2R_1080001 D4-c1 596 chr2R 1365860 1365896 chr2R 1365973 1366009 15 113 5.0 4.5 4.8 2.6 149 chr2R 1365860 intron l(2)41Ab + chr2R 1365934 intron l(2)41Ab + chr2R 1366009 intron l(2)41Ab + chr2R_15_1365001 chr2R_1365001 D4-c1 597 chr2R 1600557 1600588 chr2R 1600954 1600985 11 397 20.0 19.5 19.8 0.5 428 chr2R 1600557 intergenic not near genes chr2R 1600771 intergenic not near genes chr2R 1600985 intergenic not near genes chr2R_11_1600001 chr2R_1600001 D4-c1 598 chr2R 1685469 1685499 chr2R 1685558 1685588 9 89 6.5 2.5 4.5 1.6 119 chr2R 1685469 intron CG41520 + chr2R 1685528 intron CG41520 + chr2R 1685588 intron CG41520 + chr2R_9_1685001 chr2R_1685001 D4-c1 599 chr2R 2015130 2015165 chr2R 2015208 2015243 12 78 2.5 2.0 2.2 3.8 113 chr2R 2015130 intron CG17684 - chr2R 2015186 intron CG17684 - chr2R 2015243 intron CG17684 - chr2R_12_2015001 chr2R_2015001 D4-c1 600 chr2R 2047761 2047774 chr2R 2047992 2048005 4 231 4.0 6.5 5.2 0.6 244 chr2R 2047761 intron CG17684 - chr2R 2047883 intron CG17684 - chr2R 2048005 intron CG17684 - chr2R_4_2045001 chr2R_2045001 D4-c1 601 chr2R 2053799 2053816 chr2R 2053883 2053900 10 84 8.0 9.5 8.8 1.0 101 chr2R 2053799 intron CG17684 - chr2R 2053850 intron CG17684 - chr2R 2053900 intron CG17684 - chr2R_10_2050001 chr2R_2050001 D4-c1 602 chr2R 2498984 2499016 chr2R 2508132 2508164 roo 17 9147 6.5 4.5 5.5 2.6 9180 chr2R 2498984 intron MFS17 - chr2R 2503574 intron MFS17 - chr2R 2508164 intron MFS17 - chr2R_17_2500001 chr2R_2500001 D4-c1 603 chr2R 2508312 2508337 chr2R 2508451 2508476 14 138 4.5 6.0 5.2 2.3 164 chr2R 2508312 intron MFS17 - chr2R 2508394 intron MFS17 - chr2R 2508476 intron MFS17 - chr2R_14_2505001 chr2R_2505001 D4-c1 604 chr2R 2591548 2591554 chr2R 2594225 2594231 roo 6 2677 26.0 20.0 23.0 0.2 2683 chr2R 2591548 intergenic not near genes chr2R 2592890 intergenic not near genes chr2R 2594231 intergenic not near genes chr2R_6_2590001 chr2R_2590001 D4-c1 605 chr2R 2688953 2688962 chr2R 4570972 4570974 aurora-element 4 1882017 19.5 4.0 11.8 0.3 1882021 chr2R 2688953 intergenic not near genes chr2R 3629964 intergenic not near genes chr2R 4570974 intergenic not near genes chr2R_4_3625001 chr2R_3625001 D4-c1 606 chr2R 2942286 2942321 chr2R 2942390 2942425 20 104 4.5 4.0 4.2 3.8 139 chr2R 2942286 intron Scp1 - chr2R 2942356 intron Scp1 - chr2R 2942425 intron Scp1 - chr2R_20_2940001 chr2R_2940001 D4-c1 607 chr2R 2944971 2945007 chr2R 2945054 2945090 12 82 2.5 5.0 3.8 2.5 119 chr2R 2944971 intron Scp1 - chr2R 2945030 intron Scp1 - chr2R 2945090 intron Scp1 - chr2R_12_2945001 chr2R_2945001 D4-c1 608 chr2R 2950434 2950470 chr2R 2950557 2950593 10 120 5.5 6.0 5.8 1.5 159 chr2R 2950434 intron Scp1 - chr2R 2950514 intron Scp1 - chr2R 2950593 intron Scp1 - chr2R_10_2950001 chr2R_2950001 D4-c1 609 chr2R 3144093 3144108 chr2R 3393372 3393387 Doc 10 249279 16.5 6.5 11.5 0.8 249294 chr2R 3144093 intron CG42596 + chr2R 3268740 intergenic not near genes chr2R 3393387 intergenic not near genes chr2R_10_3265001 chr2R_3265001 D4-c1 610 chr2R 3291817 3292100 chr2R 3914992 3915262 11 623169 20.5 26.5 23.5 0.4 623445 chr2R 3291817 intergenic not near genes chr2R 3603540 intergenic not near genes chr2R 3915262 intron uex - chr2R_11_3600001 chr2R_3600001 D4-c1 611 chr2R 3293756 3293772 chr2R 3293835 3293851 9 79 3.0 5.0 4.0 1.8 95 chr2R 3293756 intergenic not near genes chr2R 3293804 intergenic not near genes chr2R 3293851 intergenic not near genes chr2R_9_3290001 chr2R_3290001 D4-c1 612 chr2R 3399228 3399260 chr2R 3399315 3399347 14 87 3.0 4.0 3.5 3.1 119 chr2R 3399228 intergenic not near genes chr2R 3399288 intergenic not near genes chr2R 3399347 intergenic not near genes chr2R_14_3395001 chr2R_3395001 D4-c1 613 chr2R 3587232 3587258 chr2R 3587310 3587336 10 77 3.0 6.0 4.5 1.8 104 chr2R 3587232 intergenic not near genes chr2R 3587284 intergenic not near genes chr2R 3587336 intergenic not near genes chr2R_10_3585001 chr2R_3585001 D4-c1 614 chr2R 4602838 4602873 chr2R 4603194 4603229 19 356 4.5 5.5 5.0 3.2 391 chr2R 4602838 intron p120ctn + chr2R 4603034 intron p120ctn + chr2R 4603229 intron p120ctn + chr2R_19_4600001 chr2R_4600001 D4-c1 615 chr2R 4622952 4622987 chr2R 4624112 4624147 1360 9 1159 6.0 1.5 3.8 1.9 1195 chr2R 4622952 intergenic CR44101 - chr2R 4623550 intergenic not near genes chr2R 4624147 intergenic not near genes chr2R_9_4620001 chr2R_4620001 D4-c1 616 chr2R 4688107 4688132 chr2R 4688201 4688226 11 94 1.5 6.0 3.8 2.3 119 chr2R 4688107 intergenic not near genes chr2R 4688166 intergenic not near genes chr2R 4688226 intergenic not near genes chr2R_11_4685001 chr2R_4685001 D4-c1 617 chr2R 4783249 4783268 chr2R 4783384 4783403 7 135 3.5 5.0 4.2 1.3 154 chr2R 4783249 intergenic not near genes chr2R 4783326 intergenic not near genes chr2R 4783403 intergenic not near genes chr2R_7_4780001 chr2R_4780001 D4-c1 618 chr2R 4821214 4821246 chr2R 4821301 4821333 10 87 1.5 2.0 1.8 3.6 119 chr2R 4821214 intron CG17528 - chr2R 4821274 intron CG17528 - chr2R 4821333 intron CG17528 - chr2R_10_4820001 chr2R_4820001 D4-c1 619 chr2R 4838869 4838888 chr2R 4840393 4840412 transib2 9 1524 9.5 6.5 8.0 1.0 1543 chr2R 4838869 intergenic not near genes chr2R 4839640 intergenic not near genes chr2R 4840412 intergenic not near genes chr2R_9_4835001 chr2R_4835001 D4-c1 620 chr2R 4908910 4908945 chr2R 4908999 4909034 15 88 4.0 5.0 4.5 2.7 124 chr2R 4908910 intergenic not near genes chr2R 4908972 intergenic not near genes chr2R 4909034 intergenic not near genes chr2R_15_4905001 chr2R_4905001 D4-c1 621 chr2R 4916096 4916125 chr2R 4916175 4916204 15 79 2.5 0.0 1.2 6.8 108 chr2R 4916096 intergenic not near genes chr2R 4916150 intergenic not near genes chr2R 4916204 intergenic not near genes chr2R_15_4915001 chr2R_4915001 D4-c1 622 chr2R 4933354 4933392 chr2R 4933918 4933957 20 565 8.5 5.0 6.8 2.6 603 chr2R 4933354 intron Ir41a + chr2R 4933656 intron Ir41a + chr2R 4933957 intron Ir41a + chr2R_20_4930001 chr2R_4930001 D4-c1 623 chr2R 4938495 4938532 chr2R 4938632 4938669 29 136 7.0 4.5 5.8 4.3 174 chr2R 4938495 intron Ir41a + chr2R 4938582 intron Ir41a + chr2R 4938669 intron Ir41a + chr2R_29_4935001 chr2R_4935001 D4-c1 624 chr2R 4940958 4940979 chr2R 4943409 4943430 9 2451 5.5 1.0 3.2 2.1 2472 chr2R 4940958 intron Ir41a + chr2R 4942194 intron Ir41a + chr2R 4943430 intron Ir41a + chr2R_9_4940001 chr2R_4940001 D4-c1 625 chr2R 4996332 4996348 chr2R 4996461 4996477 12 129 3.5 10.0 6.8 1.5 145 chr2R 4996332 intron Ir41a + chr2R 4996404 intron Ir41a + chr2R 4996477 intron Ir41a + chr2R_12_4995001 chr2R_4995001 D4-c1 626 chr2R 5096659 5096686 chr2R 5096741 5096767 14 82 7.0 12.0 9.5 1.3 108 chr2R 5096659 intergenic not near genes chr2R 5096713 intergenic not near genes chr2R 5096767 intergenic not near genes chr2R_14_5095001 chr2R_5095001 D4-c1 627 chr2R 5103043 5103076 chr2R 5103126 5103128 16 80 4.0 3.0 3.5 3.6 85 chr2R 5103043 intergenic not near genes chr2R 5103086 intergenic not near genes chr2R 5103128 intergenic not near genes chr2R_16_5100001 chr2R_5100001 D4-c1 628 chr2R 5125245 5125274 chr2R 5125564 5125593 16 319 2.5 4.5 3.5 3.6 348 chr2R 5125245 intron gus - chr2R 5125419 intron gus - chr2R 5125593 intron gus - chr2R_16_5125001 chr2R_5125001 D4-c1 629 chr2R 5150590 5150616 chr2R 5150673 5150699 15 83 8.5 6.0 7.2 1.8 109 chr2R 5150590 intron Atf6 + chr2R 5150644 intron Atf6 + chr2R 5150699 intron Atf6 + chr2R_15_5150001 chr2R_5150001 D4-c1 630 chr2R 5209778 5209812 chr2R 5210312 5210346 15 534 4.5 5.0 4.8 2.6 568 chr2R 5209778 intron Nipped-A - chr2R 5210062 intron Nipped-A - chr2R 5210346 intron Nipped-A - chr2R_15_5210001 chr2R_5210001 D4-c1 631 chr2R 5237351 5237373 chr2R 5237434 5237456 8 82 1.0 0.0 0.5 5.3 105 chr2R 5237351 intron Nipped-A - chr2R 5237404 intron Nipped-A - chr2R 5237456 intron Nipped-A - chr2R_8_5235001 chr2R_5235001 D4-c1 632 chr2R 5364463 5364494 chr2R 5364545 5364576 14 82 2.0 4.5 3.2 3.3 113 chr2R 5364463 5` UTR CR42646 + chr2R 5364520 5` UTR CR42646 + chr2R 5364576 5` UTR CR42646 + chr2R_14_5360001 chr2R_5360001 D4-c1 633 chr2R 5417993 5418027 chr2R 5420626 5420660 Burdock 11 2633 3.0 7.5 5.2 1.8 2667 chr2R 5417993 intron laccase2 + chr2R 5419326 intron laccase2 + chr2R 5420660 intron laccase2 + chr2R_11_5415001 chr2R_5415001 D4-c1 634 chr2R 5472364 5472394 chr2R 5472459 5472486 9 95 5.5 3.5 4.5 1.6 122 chr2R 5472364 intron CG30440 - chr2R 5472425 intron CG30440 - chr2R 5472486 intron CG30440 - chr2R_9_5470001 chr2R_5470001 D4-c1 635 chr2R 5475596 5475618 chr2R 5475691 5475713 9 95 2.0 3.5 2.8 2.4 117 chr2R 5475596 intron CG30440 - chr2R 5475654 intron CG30440 - chr2R 5475713 intron CG30440 - chr2R_9_5475001 chr2R_5475001 D4-c1 636 chr2R 5503554 5503579 chr2R 5503635 5503660 9 81 2.5 1.5 2.0 3.0 106 chr2R 5503554 intron,3` UTR CG30438 +,TpnC4 - chr2R 5503607 intron,3` UTR CG30438 +,TpnC4 - chr2R 5503660 intron,intron CG30438 +,TpnC4 - chr2R_9_5500001 chr2R_5500001 D4-c1 637 chr2R 5509519 5509548 chr2R 5509616 5509645 10 97 2.0 4.0 3.0 2.5 126 chr2R 5509519 intron CG30438 + chr2R 5509582 intron CG30438 + chr2R 5509645 intron CG30438 + chr2R_10_5505001 chr2R_5505001 D4-c1 638 chr2R 5543198 5543223 chr2R 5547283 5547308 invader1 7 4085 0.0 7.5 3.8 1.5 4110 chr2R 5543198 intron CG30438 + chr2R 5545253 intron CG30438 + chr2R 5547308 intron CG30438 + chr2R_7_5545001 chr2R_5545001 D4-c1 639 chr2R 5581402 5581426 chr2R 5627612 5627636 9 46210 16.5 10.0 13.2 0.6 46234 chr2R 5581402 intergenic not near genes chr2R 5604519 intron Fis1 - chr2R 5627636 intergenic not near genes chr2R_9_5600001 chr2R_5600001 D4-c1 640 chr2R 5660078 5660098 chr2R 5660163 5660183 7 85 3.0 1.0 2.0 2.3 105 chr2R 5660078 intron Not3 - chr2R 5660130 intron Not3 - chr2R 5660183 intron Not3 - chr2R_7_5660001 chr2R_5660001 D4-c1 641 chr2R 5710649 5710682 chr2R 5710727 5710760 11 77 3.0 1.5 2.2 3.4 111 chr2R 5710649 intron ap - chr2R 5710704 intron ap - chr2R 5710760 intron ap - chr2R_11_5710001 chr2R_5710001 D4-c1 642 chr2R 5606789 5606818 chr2R 5736776 5736805 8 129987 16.5 25.0 20.8 0.4 130016 chr2R 5606789 intergenic not near genes chr2R 5671797 5` UTR kune + chr2R 5736805 intergenic not near genes chr2R_8_5670001 chr2R_5670001 D4-c1 643 chr2R 5771461 5771497 chr2R 5771543 5771579 15 82 3.0 4.0 3.5 3.3 118 chr2R 5771461 intron Gp210 + chr2R 5771520 intron Gp210 + chr2R 5771579 intron Gp210 + chr2R_15_5770001 chr2R_5770001 D4-c1 644 chr2R 5772522 5772549 chr2R 5772602 5772629 8 80 3.0 3.0 3.0 2.0 107 chr2R 5772522 3` UTR Gp210 + chr2R 5772576 3` UTR Gp210 + chr2R 5772629 3` UTR Gp210 + chr2R_8_5770001 chr2R_5770001 D4-c1 645 chr2R 5833759 5833794 chr2R 5833863 5833895 15 103 4.0 4.0 4.0 3.0 136 chr2R 5833759 intron dpr12 + chr2R 5833827 intron dpr12 + chr2R 5833895 intron dpr12 + chr2R_15_5830001 chr2R_5830001 D4-c1 646 chr2R 5837113 5837147 chr2R 5837210 5837244 21 95 5.0 5.5 5.2 3.4 131 chr2R 5837113 intron dpr12 + chr2R 5837178 intron dpr12 + chr2R 5837244 intron dpr12 + chr2R_21_5835001 chr2R_5835001 D4-c1 647 chr2R 5869273 5869308 chr2R 5874350 5874385 flea 18 5077 5.5 8.0 6.8 2.3 5112 chr2R 5869273 intergenic not near genes chr2R 5871829 intergenic not near genes chr2R 5874385 intergenic not near genes chr2R_18_5870001 chr2R_5870001 D4-c1 648 chr2R 5876866 5876903 chr2R 5876969 5877006 18 103 6.0 4.5 5.2 2.9 140 chr2R 5876866 intergenic not near genes chr2R 5876936 intergenic not near genes chr2R 5877006 intergenic not near genes chr2R_18_5875001 chr2R_5875001 D4-c1 649 chr2R 5878933 5878957 chr2R 5879014 5879038 14 80 2.0 4.0 3.0 3.5 105 chr2R 5878933 intergenic CG44438 - chr2R 5878986 intergenic CG44438 - chr2R 5879038 intergenic CG44438 - chr2R_14_5875001 chr2R_5875001 D4-c1 650 chr2R 5902157 5902180 chr2R 5909717 5909740 17.6 9 7560 5.0 2.5 3.8 1.9 7583 chr2R 5902157 intron CG43366 + chr2R 5905948 intron CG43366 + chr2R 5909740 intron CG43366 + chr2R_9_5905001 chr2R_5905001 D4-c1 651 chr2R 5953081 5953095 chr2R 5953160 5953174 4 79 5.5 0.0 2.8 1.1 93 chr2R 5953081 intergenic not near genes chr2R 5953128 intergenic not near genes chr2R 5953174 intergenic not near genes chr2R_4_5950001 chr2R_5950001 D4-c1 652 chr2R 5991930 5991966 chr2R 5992019 5992055 14 89 3.0 3.5 3.2 3.3 125 chr2R 5991930 intron Src42A + chr2R 5991992 intron Src42A + chr2R 5992055 intron Src42A + chr2R_14_5990001 chr2R_5990001 D4-c1 653 chr2R 6025018 6025194 chr2R 6025137 6025403 9 189 1.5 1.5 1.5 3.6 385 chr2R 6025018 intergenic not near genes chr2R 6025210 intergenic not near genes chr2R 6025403 intergenic not near genes chr2R_9_6025001 chr2R_6025001 D4-c1 654 chr2R 6033439 6033474 chr2R 6033525 6033560 12 86 2.5 3.5 3.0 3.0 121 chr2R 6033439 intron SCAP - chr2R 6033500 intron SCAP - chr2R 6033560 intron SCAP - chr2R_12_6030001 chr2R_6030001 D4-c1 655 chr2R 6096714 6096738 chr2R 6101913 6101937 BS 20 5198 13.0 5.5 9.2 2.0 5223 chr2R 6096714 intron EcR - chr2R 6099326 intron EcR - chr2R 6101937 intron EcR - chr2R_20_6095001 chr2R_6095001 D4-c1 656 chr2R 6096739 6096751 chr2R 6101909 6101929 BS 8 5191 8.5 4.5 6.5 1.1 5190 chr2R 6096739 intron EcR - chr2R 6099334 intron EcR - chr2R 6101929 intron EcR - chr2R_8_6095001 chr2R_6095001 D4-c1 657 chr2R 6124187 6124224 chr2R 6124286 6124323 11 99 1.5 2.5 2.0 3.7 136 chr2R 6124187 intron EcR - chr2R 6124255 intron EcR - chr2R 6124323 intron EcR - chr2R_11_6120001 chr2R_6120001 D4-c1 658 chr2R 6129323 6129355 chr2R 6129402 6129434 11 79 4.0 3.5 3.8 2.3 111 chr2R 6129323 intron EcR - chr2R 6129378 intron EcR - chr2R 6129434 intron EcR - chr2R_11_6125001 chr2R_6125001 D4-c1 659 chr2R 6173670 6173707 chr2R 6174376 6174413 11 705 2.5 3.0 2.8 2.9 743 chr2R 6173670 intergenic Cyp6w1 + chr2R 6174042 exon Cyp6w1 + chr2R 6174413 exon Cyp6w1 + chr2R_11_6170001 chr2R_6170001 D4-c1 660 chr2R 6178130 6178145 chr2R 6178257 6178272 9 127 4.0 3.0 3.5 2.0 142 chr2R 6178130 intergenic not near genes chr2R 6178201 intergenic not near genes chr2R 6178272 intergenic not near genes chr2R_9_6175001 chr2R_6175001 D4-c1 661 chr2R 6194686 6194704 chr2R 6194770 6194788 8 84 7.5 10.0 8.8 0.8 102 chr2R 6194686 intron Ptr - chr2R 6194737 intron Ptr - chr2R 6194788 intron Ptr - chr2R_8_6190001 chr2R_6190001 D4-c1 662 chr2R 6494529 6494555 chr2R 6499292 6499318 F-element 4 4763 6.0 1.0 3.5 0.9 4789 chr2R 6494529 intergenic not near genes chr2R 6496924 intergenic not near genes chr2R 6499318 intergenic not near genes chr2R_4_6495001 chr2R_6495001 D4-c1 663 chr2R 6530774 6530795 chr2R 6530855 6530876 9 81 1.5 3.5 2.5 2.6 102 chr2R 6530774 intron jing + chr2R 6530825 intron jing + chr2R 6530876 intron jing + chr2R_9_6530001 chr2R_6530001 D4-c1 664 chr2R 6539822 6539855 chr2R 6539946 6539971 4 118 2.5 1.5 2.0 1.3 149 chr2R 6539822 intron jing + chr2R 6539896 intron jing + chr2R 6539971 intron jing + chr2R_4_6535001 chr2R_6535001 D4-c1 665 chr2R 6562541 6562577 chr2R 6562631 6562667 25 88 3.5 4.0 3.8 5.2 126 chr2R 6562541 intron jing + chr2R 6562604 intron jing + chr2R 6562667 intron jing + chr2R_25_6560001 chr2R_6560001 D4-c1 666 chr2R 6568787 6568813 chr2R 6568915 6568934 14 126 4.5 6.5 5.5 2.2 147 chr2R 6568787 intron jing + chr2R 6568860 intron jing + chr2R 6568934 intron jing + chr2R_14_6565001 chr2R_6565001 D4-c1 667 chr2R 6577944 6577977 chr2R 6578026 6578059 15 80 4.0 2.0 3.0 3.8 115 chr2R 6577944 intron jing + chr2R 6578002 intron jing + chr2R 6578059 intron jing + chr2R_15_6575001 chr2R_6575001 D4-c1 668 chr2R 6579772 6579803 chr2R 6584859 6584890 flea 12 5087 3.0 8.0 5.5 1.8 5118 chr2R 6579772 intron jing + chr2R 6582331 intron jing + chr2R 6584890 intron jing + chr2R_12_6580001 chr2R_6580001 D4-c1 669 chr2R 6713915 6713932 chr2R 6714013 6714030 6 98 0.5 5.5 3.0 1.5 115 chr2R 6713915 intron,intron CG3409 -,CG45092 - chr2R 6713972 intron,intron CG3409 -,CG45092 - chr2R 6714030 intron,intron CG3409 -,CG45092 - chr2R_6_6710001 chr2R_6710001 D4-c1 670 chr2R 6741496 6741526 chr2R 6741575 6741605 9 78 1.5 2.0 1.8 3.2 109 chr2R 6741496 intergenic phtf + chr2R 6741550 intergenic phtf + chr2R 6741605 intergenic phtf + chr2R_9_6740001 chr2R_6740001 D4-c1 671 chr2R 6906425 6906462 chr2R 6906525 6906561 16 100 1.0 5.0 3.0 4.0 136 chr2R 6906425 intron CG30158 + chr2R 6906493 intron CG30158 + chr2R 6906561 intron CG30158 + chr2R_16_6905001 chr2R_6905001 D4-c1 672 chr2R 6952165 6952185 chr2R 6959746 6959766 opus 8 7581 3.0 2.5 2.8 2.1 7601 chr2R 6952165 intron,intron mim -,CheB42c - chr2R 6955966 intron,intron mim -,CheB42c - chr2R 6959766 intron,intron mim -,CheB42c - chr2R_8_6955001 chr2R_6955001 D4-c1 673 chr2R 6964094 6964117 chr2R 6964354 6964377 17 260 4.0 6.5 5.2 2.7 283 chr2R 6964094 intron,intron mim -,CheB42c - chr2R 6964236 intron,intron mim -,CheB42c - chr2R 6964377 intron,intron mim -,CheB42c - chr2R_17_6960001 chr2R_6960001 D4-c1 674 chr2R 7064915 7064927 chr2R 7064992 7065004 4 77 4.5 2.0 3.2 1.0 89 chr2R 7064915 intron Tsp42Er + chr2R 7064960 intron Tsp42Er + chr2R 7065004 intron Tsp42Er + chr2R_4_7060001 chr2R_7060001 D4-c1 675 chr2R 7103376 7103404 chr2R 7103453 7103481 8 76 7.5 5.0 6.2 1.1 105 chr2R 7103376 intron esn + chr2R 7103428 intron esn + chr2R 7103481 intron esn + chr2R_8_7100001 chr2R_7100001 D4-c1 676 chr2R 7139944 7139956 chr2R 7141437 7141449 hopper2 11 1493 3.5 14.5 9.0 1.1 1505 chr2R 7139944 intergenic not near genes chr2R 7140696 intergenic not near genes chr2R 7141449 intergenic not near genes chr2R_11_7140001 chr2R_7140001 D4-c1 677 chr2R 7160569 7160584 chr2R 7160648 7160663 7 79 2.5 7.5 5.0 1.2 94 chr2R 7160569 intron pk + chr2R 7160616 intron pk + chr2R 7160663 intron pk + chr2R_7_7160001 chr2R_7160001 D4-c1 678 chr2R 7164269 7164285 chr2R 7164461 7164477 5 192 3.5 8.5 6.0 0.7 208 chr2R 7164269 intron pk + chr2R 7164373 intron pk + chr2R 7164477 intron pk + chr2R_5_7160001 chr2R_7160001 D4-c1 679 chr2R 7196568 7196601 chr2R 7201344 7201377 F-element 10 4776 4.0 3.5 3.8 2.1 4809 chr2R 7196568 intron pk + chr2R 7198972 intron pk + chr2R 7201377 intron pk + chr2R_10_7195001 chr2R_7195001 D4-c1 680 chr2R 7235818 7235833 chr2R 7240911 7240926 jockey 7 5093 4.5 6.5 5.5 1.1 5108 chr2R 7235818 intergenic not near genes chr2R 7238372 intergenic not near genes chr2R 7240926 intergenic not near genes chr2R_7_7235001 chr2R_7235001 D4-c1 681 chr2R 7235837 7235850 chr2R 7240909 7240942 jockey 15 5091 2.0 6.5 4.2 2.9 5105 chr2R 7235837 intergenic not near genes chr2R 7238390 intergenic not near genes chr2R 7240942 intergenic not near genes chr2R_15_7235001 chr2R_7235001 D4-c1 682 chr2R 7311786 7311803 chr2R 7311865 7311882 4 79 2.0 3.5 2.8 1.1 96 chr2R 7311786 intron CG12164 + chr2R 7311834 intron CG12164 + chr2R 7311882 intron CG12164 + chr2R_4_7310001 chr2R_7310001 D4-c1 683 chr2R 7328127 7328151 chr2R 7328239 7328263 6 112 3.0 4.0 3.5 1.3 136 chr2R 7328127 intron,intron Dscam1 -,CR45129 + chr2R 7328195 intron,intron Dscam1 -,CR45129 + chr2R 7328263 intron,intron Dscam1 -,CR45129 + chr2R_6_7325001 chr2R_7325001 D4-c1 684 chr2R 7371748 7371777 chr2R 7371853 7371882 15 105 8.0 6.5 7.2 1.8 134 chr2R 7371748 intron Dscam1 - chr2R 7371815 intron Dscam1 - chr2R 7371882 intron Dscam1 - chr2R_15_7370001 chr2R_7370001 D4-c1 685 chr2R 7434899 7434914 chr2R 7439201 7439216 Juan 10 4302 3.0 8.0 5.5 1.5 4317 chr2R 7434899 intergenic so + chr2R 7437058 intergenic not near genes chr2R 7439216 intergenic not near genes chr2R_10_7435001 chr2R_7435001 D4-c1 686 chr2R 7608406 7608434 chr2R 7613610 7613638 I-element 11 5204 3.5 0.0 1.8 3.9 5232 chr2R 7608406 intron CG1358 - chr2R 7611022 intron CG1358 - chr2R 7613638 intron CG1358 - chr2R_11_7610001 chr2R_7610001 D4-c1 687 chr2R 7629291 7629312 chr2R 7629410 7629431 8 119 4.5 4.0 4.2 1.5 140 chr2R 7629291 intron CG43340 + chr2R 7629361 intron CG43340 + chr2R 7629431 intron CG43340 + chr2R_8_7625001 chr2R_7625001 D4-c1 688 chr2R 7642867 7642891 chr2R 7642948 7642972 15 81 4.5 4.0 4.2 2.9 105 chr2R 7642867 intron CG43340 + chr2R 7642920 intron CG43340 + chr2R 7642972 intron CG43340 + chr2R_15_7640001 chr2R_7640001 D4-c1 689 chr2R 7677426 7677460 chr2R 7677557 7677591 12 128 4.0 2.0 3.0 3.0 165 chr2R 7677426 3` UTR CG1399 - chr2R 7677508 3` UTR CG1399 - chr2R 7677591 3` UTR CG1399 - chr2R_12_7675001 chr2R_7675001 D4-c1 690 chr2R 7692010 7692037 chr2R 7692092 7692119 12 82 3.5 4.5 4.0 2.4 109 chr2R 7692010 intron CG1399 - chr2R 7692064 intron CG1399 - chr2R 7692119 intron CG1399 - chr2R_12_7690001 chr2R_7690001 D4-c1 691 chr2R 7760284 7760301 chr2R 7760422 7760439 7 138 4.5 8.5 6.5 0.9 155 chr2R 7760284 intron,intron CG30497 -,CG45093 - chr2R 7760362 intron,intron CG30497 -,CG45093 - chr2R 7760439 intron,intron CG30497 -,CG45093 - chr2R_7_7760001 chr2R_7760001 D4-c1 692 chr2R 7769736 7769771 chr2R 7769814 7769849 11 78 1.0 2.5 1.8 3.9 113 chr2R 7769736 intron,intron CG30497 -,CG45093 - chr2R 7769792 intron,intron CG30497 -,CG45093 - chr2R 7769849 intron,intron CG30497 -,CG45093 - chr2R_11_7765001 chr2R_7765001 D4-c1 693 chr2R 7815669 7815704 chr2R 7822139 7822174 Burdock 19 6470 4.5 6.0 5.2 3.1 6505 chr2R 7815669 intergenic CG1882 + chr2R 7818922 intergenic not near genes chr2R 7822174 3` UTR cathD - chr2R_19_7815001 chr2R_7815001 D4-c1 694 chr2R 7842191 7842227 chr2R 7842280 7842316 19 89 7.0 2.5 4.8 3.3 125 chr2R 7842191 intron Dgk - chr2R 7842254 intron Dgk - chr2R 7842316 intron Dgk - chr2R_19_7840001 chr2R_7840001 D4-c1 695 chr2R 7869187 7869215 chr2R 7873974 7874002 Doc 17 4787 4.5 5.5 5.0 2.8 4815 chr2R 7869187 intron Dgk - chr2R 7871594 intron Dgk - chr2R 7874002 intron Dgk - chr2R_17_7870001 chr2R_7870001 D4-c1 696 chr2R 7897137 7897141 chr2R 7897227 7897231 4 90 0.0 9.5 4.8 0.7 94 chr2R 7897137 intron CG30377 + chr2R 7897184 intron CG30377 + chr2R 7897231 intron CG30377 + chr2R_4_7895001 chr2R_7895001 D4-c1 697 chr2R 7897143 7897153 chr2R 7897226 7897243 7 89 0.0 9.5 4.8 1.2 100 chr2R 7897143 intron CG30377 + chr2R 7897193 intron CG30377 + chr2R 7897243 intron CG30377 + chr2R_7_7895001 chr2R_7895001 D4-c1 698 chr2R 7915720 7915745 chr2R 7915813 7915838 16 93 3.0 6.5 4.8 2.8 118 chr2R 7915720 intron CG12159 - chr2R 7915779 intron CG12159 - chr2R 7915838 intron CG12159 - chr2R_16_7915001 chr2R_7915001 D4-c1 699 chr2R 8014117 8014146 chr2R 8014194 8014222 13 77 1.5 1.5 1.5 5.2 105 chr2R 8014117 intergenic CG14762 - chr2R 8014170 intergenic CG14762 - chr2R 8014222 intergenic CG14762 - chr2R_13_8010001 chr2R_8010001 D4-c1 700 chr2R 8015657 8015682 chr2R 8017674 8017706 12 2022 3.0 6.5 4.8 2.1 2049 chr2R 8015657 intergenic mir-4981 + chr2R 8016682 intergenic not near genes chr2R 8017706 intergenic not near genes chr2R_12_8015001 chr2R_8015001 D4-c1 701 chr2R 8026811 8026836 chr2R 8026888 8026913 8 77 1.0 2.0 1.5 3.2 102 chr2R 8026811 intergenic CR45267 + chr2R 8026862 intergenic CR45267 + chr2R 8026913 intergenic CR45267 + chr2R_8_8025001 chr2R_8025001 D4-c1 702 chr2R 8036261 8036289 chr2R 8036340 8036372 8 79 3.0 4.5 3.8 1.7 111 chr2R 8036261 intron Optix + chr2R 8036316 intron Optix + chr2R 8036372 intron Optix + chr2R_8_8035001 chr2R_8035001 D4-c1 703 chr2R 8051211 8051239 chr2R 8051297 8051325 22 86 6.0 5.0 5.5 3.4 114 chr2R 8051211 intergenic not near genes chr2R 8051268 intergenic not near genes chr2R 8051325 intergenic not near genes chr2R_22_8050001 chr2R_8050001 D4-c1 704 chr2R 8067062 8067096 chr2R 8067147 8067181 11 85 3.5 5.5 4.5 2.0 119 chr2R 8067062 intron CG17977 - chr2R 8067122 intron CG17977 - chr2R 8067181 exon CG17977 - chr2R_11_8065001 chr2R_8065001 D4-c1 705 chr2R 8089252 8089286 chr2R 8089339 8089373 17 87 3.0 3.0 3.0 4.2 121 chr2R 8089252 3` UTR sut2 + chr2R 8089312 intergenic sut2 +,sut3 + chr2R 8089373 intergenic sut2 +,sut3 + chr2R_17_8085001 chr2R_8085001 D4-c1 706 chr2R 8155577 8155613 chr2R 8155667 8155703 19 89 5.5 3.5 4.5 3.5 126 chr2R 8155577 intron,intron Lpin -,kermit - chr2R 8155640 intron,intron Lpin -,kermit - chr2R 8155703 intron,intron Lpin -,kermit - chr2R_19_8155001 chr2R_8155001 D4-c1 707 chr2R 8157901 8157910 chr2R 8157990 8157999 6 88 7.0 6.0 6.5 0.8 98 chr2R 8157901 5` UTR CR44068 + chr2R 8157950 5` UTR CR44068 + chr2R 8157999 5` UTR CR44068 + chr2R_6_8155001 chr2R_8155001 D4-c1 708 chr2R 8330860 8330888 chr2R 8331347 8331375 roo 13 487 7.0 4.0 5.5 2.0 515 chr2R 8330860 intron pdm3 + chr2R 8331118 intron pdm3 + chr2R 8331375 intron pdm3 + chr2R_13_8330001 chr2R_8330001 D4-c1 709 chr2R 8338641 8338668 chr2R 8338723 8338751 18 83 3.5 3.0 3.2 4.3 110 chr2R 8338641 intron pdm3 + chr2R 8338696 intron pdm3 + chr2R 8338751 intron pdm3 + chr2R_18_8335001 chr2R_8335001 D4-c1 710 chr2R 8398213 8398218 chr2R 8402990 8403000 Doc 5 4781 7.5 7.5 7.5 0.6 4787 chr2R 8398213 intron CG2121 - chr2R 8400606 intron CG2121 - chr2R 8403000 intron CG2121 - chr2R_5_8400001 chr2R_8400001 D4-c1 711 chr2R 8398228 8398244 chr2R 8402988 8403026 Doc 16 4776 7.0 7.0 7.0 2.0 4798 chr2R 8398228 intron CG2121 - chr2R 8400627 intron CG2121 - chr2R 8403026 intron CG2121 - chr2R_16_8400001 chr2R_8400001 D4-c1 712 chr2R 8419366 8419391 chr2R 8419450 8419475 10 82 4.5 4.5 4.5 1.8 109 chr2R 8419366 intergenic not near genes chr2R 8419420 intergenic not near genes chr2R 8419475 intergenic not near genes chr2R_10_8415001 chr2R_8415001 D4-c1 713 chr2R 8512764 8512798 chr2R 8512844 8512878 28 80 6.5 8.5 7.5 3.3 114 chr2R 8512764 intron mtt - chr2R 8512821 intron mtt - chr2R 8512878 intron mtt - chr2R_28_8510001 chr2R_8510001 D4-c1 714 chr2R 8518777 8518965 chr2R 12066248 12066402 7 3547461 15.5 0.0 7.8 0.8 3547625 chr2R 8518777 intron mtt - chr2R 10292590 intron CAP + chr2R 12066402 intron CG8888 - chr2R_7_10290001 chr2R_10290001 D4-c1 715 chr2R 8536198 8536228 chr2R 8536431 8536461 11 233 3.0 4.0 3.5 2.4 263 chr2R 8536198 intergenic not near genes chr2R 8536330 intergenic not near genes chr2R 8536461 intergenic not near genes chr2R_11_8535001 chr2R_8535001 D4-c1 716 chr2R 8722763 8722795 chr2R 8723005 8723037 pogo 10 242 6.0 10.0 8.0 1.1 274 chr2R 8722763 intron CG14767 - chr2R 8722900 intron CG14767 - chr2R 8723037 intron CG14767 - chr2R_10_8720001 chr2R_8720001 D4-c1 717 chr2R 8777933 8777946 chr2R 8784138 8784151 diver 5 6205 2.0 6.5 4.2 1.0 6218 chr2R 8777933 intergenic not near genes chr2R 8781042 intergenic not near genes chr2R 8784151 intergenic not near genes chr2R_5_8780001 chr2R_8780001 D4-c1 718 chr2R 8835447 8835468 chr2R 8835513 8835546 12 74 2.0 1.5 1.8 4.3 99 chr2R 8835447 intron sns + chr2R 8835496 intron sns + chr2R 8835546 intron sns + chr2R_12_8835001 chr2R_8835001 D4-c1 719 chr2R 9047420 9047433 chr2R 9047516 9047529 6 96 3.0 4.5 3.8 1.2 109 chr2R 9047420 intron CG13743 - chr2R 9047474 intron CG13743 - chr2R 9047529 intron CG13743 - chr2R_6_9045001 chr2R_9045001 D4-c1 720 chr2R 9079402 9079438 chr2R 9079509 9079545 10 107 5.5 4.0 4.8 1.7 143 chr2R 9079402 intron CG8083 + chr2R 9079474 intron CG8083 + chr2R 9079545 intron CG8083 + chr2R_10_9075001 chr2R_9075001 D4-c1 721 chr2R 9151302 9151331 chr2R 9157773 9157802 Burdock 15 6471 5.5 3.5 4.5 2.7 6500 chr2R 9151302 exon CG30345 + chr2R 9154552 intergenic not near genes chr2R 9157802 intergenic CG8008 - chr2R_15_9150001 chr2R_9150001 D4-c1 722 chr2R 9161691 9161721 chr2R 9161820 9161850 16 129 51.5 47.0 49.2 0.3 159 chr2R 9161691 5` UTR CR44283 + chr2R 9161770 5` UTR CR44283 + chr2R 9161850 5` UTR CR44283 + chr2R_16_9160001 chr2R_9160001 D4-c1 723 chr2R 9212690 9212725 chr2R 9213177 9213212 roo 16 487 8.0 7.0 7.5 1.9 522 chr2R 9212690 intergenic CR45309 + chr2R 9212951 intergenic CR45309 + chr2R 9213212 5` UTR CR45309 + chr2R_16_9210001 chr2R_9210001 D4-c1 724 chr2R 9227867 9227904 chr2R 9227955 9227992 14 88 4.0 2.5 3.2 3.3 125 chr2R 9227867 3` UTR hig - chr2R 9227930 3` UTR hig - chr2R 9227992 3` UTR hig - chr2R_14_9225001 chr2R_9225001 D4-c1 725 chr2R 9237285 9237297 chr2R 9237365 9237377 4 80 3.5 4.0 3.8 0.8 92 chr2R 9237285 intron hig - chr2R 9237331 intron hig - chr2R 9237377 intron hig - chr2R_4_9235001 chr2R_9235001 D4-c1 726 chr2R 9249266 9249281 chr2R 9249349 9249364 8 83 0.5 8.0 4.2 1.5 98 chr2R 9249266 intergenic not near genes chr2R 9249315 intergenic not near genes chr2R 9249364 intergenic not near genes chr2R_8_9245001 chr2R_9245001 D4-c1 727 chr2R 9368124 9368155 chr2R 9368201 9368232 16 77 7.0 0.0 3.5 3.6 108 chr2R 9368124 intron CG13954 - chr2R 9368178 intron CG13954 - chr2R 9368232 intron CG13954 - chr2R_16_9365001 chr2R_9365001 D4-c1 728 chr2R 9391056 9391087 chr2R 9391618 9391649 17 561 2.0 6.5 4.2 3.3 593 chr2R 9391056 intron l(2)03659 + chr2R 9391352 exon l(2)03659 + chr2R 9391649 exon l(2)03659 + chr2R_17_9390001 chr2R_9390001 D4-c1 729 chr2R 9480075 9480110 chr2R 9490607 9490642 roo 11 10532 3.0 9.0 6.0 1.6 10567 chr2R 9480075 intergenic not near genes chr2R 9485358 intergenic not near genes chr2R 9490642 intergenic not near genes chr2R_11_9485001 chr2R_9485001 D4-c1 730 chr2R 9509435 9509453 chr2R 9509520 9509538 4 85 3.0 5.5 4.2 0.8 103 chr2R 9509435 intron brp + chr2R 9509486 intron brp + chr2R 9509538 intron brp + chr2R_4_9505001 chr2R_9505001 D4-c1 731 chr2R 9510670 9510694 chr2R 9510787 9510811 7 117 0.0 8.0 4.0 1.4 141 chr2R 9510670 intron brp + chr2R 9510740 intron brp + chr2R 9510811 intron brp + chr2R_7_9510001 chr2R_9510001 D4-c1 732 chr2R 9561826 9561849 chr2R 9561915 9561938 9 89 0.0 3.0 1.5 3.6 112 chr2R 9561826 3` UTR,intron CR45281 -,CG1809 + chr2R 9561882 3` UTR,intron CR45281 -,CG1809 + chr2R 9561938 3` UTR,intron CR45281 -,CG1809 + chr2R_9_9560001 chr2R_9560001 D4-c1 733 chr2R 9669135 9669171 chr2R 9669237 9669273 19 101 3.5 6.0 4.8 3.3 138 chr2R 9669135 intron Mmp2 - chr2R 9669204 intron Mmp2 - chr2R 9669273 intron Mmp2 - chr2R_19_9665001 chr2R_9665001 D4-c1 734 chr2R 9671182 9671212 chr2R 9671260 9671290 9 76 9.5 10.0 9.8 0.8 108 chr2R 9671182 intron Mmp2 - chr2R 9671236 intron Mmp2 - chr2R 9671290 intron Mmp2 - chr2R_9_9670001 chr2R_9670001 D4-c1 735 chr2R 9699412 9699426 chr2R 9699500 9699514 7 88 9.5 3.5 6.5 0.9 102 chr2R 9699412 intergenic not near genes chr2R 9699463 intergenic not near genes chr2R 9699514 intergenic not near genes chr2R_7_9695001 chr2R_9695001 D4-c1 736 chr2R 9699428 9699441 chr2R 9699496 9699529 10 84 6.0 3.5 4.8 1.7 101 chr2R 9699428 intergenic not near genes chr2R 9699478 intergenic not near genes chr2R 9699529 intergenic not near genes chr2R_10_9695001 chr2R_9695001 D4-c1 737 chr2R 9707230 9707245 chr2R 9707327 9707342 5 97 21.0 24.0 22.5 0.2 112 chr2R 9707230 exon CG1773 + chr2R 9707286 exon CG1773 + chr2R 9707342 exon CG1773 + chr2R_5_9705001 chr2R_9705001 D4-c1 738 chr2R 9716906 9716927 chr2R 9717023 9717044 5 117 26.0 18.5 22.2 0.2 138 chr2R 9716906 exon sqa - chr2R 9716975 exon sqa - chr2R 9717044 exon sqa - chr2R_5_9715001 chr2R_9715001 D4-c1 739 chr2R 9725045 9725059 chr2R 9725125 9725139 5 80 13.5 11.0 12.2 0.4 94 chr2R 9725045 intron sqa - chr2R 9725092 intron sqa - chr2R 9725139 intron sqa - chr2R_5_9725001 chr2R_9725001 D4-c1 740 chr2R 9726619 9726642 chr2R 9734171 9734194 17.6 7 7551 2.0 3.0 2.5 2.0 7575 chr2R 9726619 intron sqa - chr2R 9730406 intron sqa - chr2R 9734194 intron sqa - chr2R_7_9730001 chr2R_9730001 D4-c1 741 chr2R 9859195 9859219 chr2R 9861544 9861568 5 2349 22.5 18.5 20.5 0.2 2373 chr2R 9859195 intron CG1516 - chr2R 9860382 intron CG1516 - chr2R 9861568 intergenic CR44293 +,CG1516 - chr2R_5_9860001 chr2R_9860001 D4-c1 742 chr2R 9871047 9871074 chr2R 9871533 9871561 roo 9 487 2.5 8.0 5.2 1.5 514 chr2R 9871047 intron cbx - chr2R 9871304 intron cbx - chr2R 9871561 intron,5` UTR cbx -,CG18446 + chr2R_9_9870001 chr2R_9870001 D4-c1 743 chr2R 9945434 9945470 chr2R 9945631 9945667 BS 12 197 4.5 7.0 5.8 1.8 233 chr2R 9945434 intron Mef2 - chr2R 9945550 intron Mef2 - chr2R 9945667 intron Mef2 - chr2R_12_9945001 chr2R_9945001 D4-c1 744 chr2R 9950732 9950746 chr2R 9950943 9950957 4 211 11.5 5.5 8.5 0.4 225 chr2R 9950732 intron Mef2 - chr2R 9950844 intron Mef2 - chr2R 9950957 intron Mef2 - chr2R_4_9950001 chr2R_9950001 D4-c1 745 chr2R 10005560 10005584 chr2R 10005657 10005682 11 98 5.0 5.0 5.0 1.8 122 chr2R 10005560 intron Pka-R2 - chr2R 10005621 intron Pka-R2 - chr2R 10005682 intron Pka-R2 - chr2R_11_10005001 chr2R_10005001 D4-c1 746 chr2R 10005845 10005875 chr2R 10007011 10007041 1360 20 1164 11.0 5.0 8.0 2.2 1196 chr2R 10005845 intron Pka-R2 - chr2R 10006443 intron Pka-R2 - chr2R 10007041 intron Pka-R2 - chr2R_20_10005001 chr2R_10005001 D4-c1 747 chr2R 10008570 10008592 chr2R 10008649 10008653 8 76 6.5 0.0 3.2 1.9 83 chr2R 10008570 intron Pka-R2 - chr2R 10008612 intron Pka-R2 - chr2R 10008653 intron Pka-R2 - chr2R_8_10005001 chr2R_10005001 D4-c1 748 chr2R 10047815 10047843 chr2R 10047899 10047926 4 84 2.5 2.5 2.5 1.1 111 chr2R 10047815 intron oys - chr2R 10047870 intron oys - chr2R 10047926 intron oys - chr2R_4_10045001 chr2R_10045001 D4-c1 749 chr2R 10122743 10122747 chr2R 10122954 10122958 5 211 13.5 6.5 10.0 0.5 215 chr2R 10122743 intergenic Ccs - chr2R 10122850 intergenic Ccs - chr2R 10122958 intergenic Ccs - chr2R_5_10120001 chr2R_10120001 D4-c1 750 chr2R 10132203 10132222 chr2R 10132284 10132303 14 81 0.0 8.5 4.2 2.7 100 chr2R 10132203 intron gem + chr2R 10132253 intron gem + chr2R 10132303 intron gem + chr2R_14_10130001 chr2R_10130001 D4-c1 751 chr2R 10167108 10167141 chr2R 10167184 10167218 22 76 7.0 5.0 6.0 3.1 110 chr2R 10167108 intron KCNQ - chr2R 10167163 intron KCNQ - chr2R 10167218 intron KCNQ - chr2R_22_10165001 chr2R_10165001 D4-c1 752 chr2R 10171109 10171146 chr2R 10171194 10171231 11 85 2.5 2.0 2.2 3.4 122 chr2R 10171109 intron KCNQ - chr2R 10171170 intron KCNQ - chr2R 10171231 intron KCNQ - chr2R_11_10170001 chr2R_10170001 D4-c1 753 chr2R 10172637 10172668 chr2R 10172750 10172772 16 112 3.5 0.0 1.8 5.7 135 chr2R 10172637 intron KCNQ - chr2R 10172704 intron KCNQ - chr2R 10172772 intron KCNQ - chr2R_16_10170001 chr2R_10170001 D4-c1 754 chr2R 10176123 10176143 chr2R 10176203 10176223 6 79 12.5 12.5 12.5 0.4 100 chr2R 10176123 intron KCNQ - chr2R 10176173 intron KCNQ - chr2R 10176223 intron KCNQ - chr2R_6_10175001 chr2R_10175001 D4-c1 755 chr2R 10176876 10176912 chr2R 10186044 10186080 roo 9 9168 4.0 2.5 3.2 2.1 9204 chr2R 10176876 intron KCNQ - chr2R 10181478 intron KCNQ - chr2R 10186080 intron KCNQ - chr2R_9_10180001 chr2R_10180001 D4-c1 756 chr2R 10190442 10190462 chr2R 10190527 10190547 9 85 5.5 3.5 4.5 1.6 105 chr2R 10190442 intron KCNQ - chr2R 10190494 intron KCNQ - chr2R 10190547 intron KCNQ - chr2R_9_10190001 chr2R_10190001 D4-c1 757 chr2R 10216193 10216217 chr2R 10216272 10216296 6 79 1.5 5.0 3.2 1.4 103 chr2R 10216193 intron,intron CG12912 -,Hr46 - chr2R 10216244 intron,intron CG12912 -,Hr46 - chr2R 10216296 intron,intron CG12912 -,Hr46 - chr2R_6_10215001 chr2R_10215001 D4-c1 758 chr2R 10225734 10225752 chr2R 10225817 10225835 4 83 2.5 6.5 4.5 0.7 101 chr2R 10225734 intron,intron CG12912 -,Hr46 - chr2R 10225784 intron,intron CG12912 -,Hr46 - chr2R 10225835 intron,intron CG12912 -,Hr46 - chr2R_4_10225001 chr2R_10225001 D4-c1 759 chr2R 10266494 10266531 chr2R 10266586 10266607 11 88 3.0 2.5 2.8 2.9 113 chr2R 10266494 intron CG12910 + chr2R 10266550 intron CG12910 + chr2R 10266607 intron CG12910 + chr2R_11_10265001 chr2R_10265001 D4-c1 760 chr2R 10273695 10273723 chr2R 10275180 10275208 7 1484 14.0 15.5 14.8 0.4 1513 chr2R 10273695 intron CAP + chr2R 10274452 intron CAP + chr2R 10275208 intron CAP + chr2R_7_10270001 chr2R_10270001 D4-c1 761 chr2R 10313315 10313354 chr2R 10313404 10313443 19 89 2.0 5.0 3.5 4.2 128 chr2R 10313315 intergenic not near genes chr2R 10313379 intergenic not near genes chr2R 10313443 intergenic Ndg + chr2R_19_10310001 chr2R_10310001 D4-c1 762 chr2R 10352670 10352705 chr2R 10352748 10352783 12 78 2.0 2.5 2.2 3.8 113 chr2R 10352670 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352726 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352783 intron,exon,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R_12_10350001 chr2R_10350001 D4-c1 763 chr2R 10354547 10354583 chr2R 10354634 10354670 6 87 12.5 12.0 12.2 0.5 123 chr2R 10354547 intron CG42732 - chr2R 10354608 intron CG42732 - chr2R 10354670 intron CG42732 - chr2R_6_10350001 chr2R_10350001 D4-c1 764 chr2R 10363860 10363899 chr2R 10363940 10363979 19 80 4.0 2.0 3.0 4.8 119 chr2R 10363860 intron CG42732 - chr2R 10363920 intron CG42732 - chr2R 10363979 intron CG42732 - chr2R_19_10360001 chr2R_10360001 D4-c1 765 chr2R 10374779 10374809 chr2R 10374859 10374889 18 80 0.0 3.5 1.8 6.4 110 chr2R 10374779 intron CG42732 - chr2R 10374834 intron CG42732 - chr2R 10374889 intron CG42732 - chr2R_18_10370001 chr2R_10370001 D4-c1 766 chr2R 10387980 10388003 chr2R 10388078 10388101 8 98 0.0 9.0 4.5 1.5 121 chr2R 10387980 intron CG42732 - chr2R 10388040 intron CG42732 - chr2R 10388101 intron CG42732 - chr2R_8_10385001 chr2R_10385001 D4-c1 767 chr2R 10411820 10411835 chr2R 10411903 10411918 8 83 0.5 10.0 5.2 1.3 98 chr2R 10411820 intron CG42732 - chr2R 10411869 intron CG42732 - chr2R 10411918 intron CG42732 - chr2R_8_10410001 chr2R_10410001 D4-c1 768 chr2R 10429033 10429052 chr2R 10429105 10429130 10 77 2.0 6.0 4.0 2.0 97 chr2R 10429033 intergenic not near genes chr2R 10429082 intergenic not near genes chr2R 10429130 intergenic not near genes chr2R_10_10425001 chr2R_10425001 D4-c1 769 chr2R 10558234 10558244 chr2R 10558311 10558321 4 77 9.0 9.0 9.0 0.4 87 chr2R 10558234 5` UTR psq + chr2R 10558278 5` UTR psq + chr2R 10558321 5` UTR psq + chr2R_4_10555001 chr2R_10555001 D4-c1 770 chr2R 10572012 10572031 chr2R 10572205 10572224 7 192 12.0 7.5 9.8 0.6 212 chr2R 10572012 intron psq + chr2R 10572118 intron psq + chr2R 10572224 intron psq + chr2R_7_10570001 chr2R_10570001 D4-c1 771 chr2R 10585574 10585591 chr2R 10594158 10594175 Tirant 10 8584 4.5 8.5 6.5 1.3 8601 chr2R 10585574 intron psq + chr2R 10589874 intron psq + chr2R 10594175 intron psq + chr2R_10_10585001 chr2R_10585001 D4-c1 772 chr2R 10622349 10622381 chr2R 10637115 10637120 mdg1 8 14763 3.5 3.0 3.2 1.9 14771 chr2R 10622349 intron CG11883 + chr2R 10629734 intron CG11883 + chr2R 10637120 intron CG11883 + chr2R_8_10625001 chr2R_10625001 D4-c1 773 chr2R 10644061 10644078 chr2R 10644140 10644157 8 79 3.0 1.0 2.0 2.7 96 chr2R 10644061 intron Git - chr2R 10644109 intron Git - chr2R 10644157 intron Git - chr2R_8_10640001 chr2R_10640001 D4-c1 774 chr2R 10653204 10653230 chr2R 10653284 10653310 6 78 4.0 5.0 4.5 1.1 106 chr2R 10653204 intergenic not near genes chr2R 10653257 intergenic not near genes chr2R 10653310 intergenic not near genes chr2R_6_10650001 chr2R_10650001 D4-c1 775 chr2R 10720316 10720376 chr2R 10720393 10720471 6 92 13.0 13.0 13.0 0.4 155 chr2R 10720316 3` UTR stan + chr2R 10720394 3` UTR stan + chr2R 10720471 3` UTR stan + chr2R_6_10720001 chr2R_10720001 D4-c1 776 chr2R 10781400 10781413 chr2R 10781761 10781774 5 361 11.5 6.0 8.8 0.5 374 chr2R 10781400 intron CG33144 - chr2R 10781587 intron CG33144 - chr2R 10781774 intron CG33144 - chr2R_5_10780001 chr2R_10780001 D4-c1 777 chr2R 10785866 10785890 chr2R 10785946 10785970 7 80 9.5 9.0 9.2 0.7 104 chr2R 10785866 intron,3` UTR CG33144 -,CR44300 - chr2R 10785918 intron,3` UTR CG33144 -,CR44300 - chr2R 10785970 intron,3` UTR CG33144 -,CR44300 - chr2R_7_10785001 chr2R_10785001 D4-c1 778 chr2R 10790141 10790162 chr2R 10790230 10790251 14 89 16.5 14.5 15.5 0.8 110 chr2R 10790141 intron CG33144 - chr2R 10790196 intron CG33144 - chr2R 10790251 intron CG33144 - chr2R_14_10790001 chr2R_10790001 D4-c1 779 chr2R 10796715 10796732 chr2R 10796815 10796832 7 100 14.5 11.0 12.8 0.5 117 chr2R 10796715 intron CG33144 - chr2R 10796774 intron CG33144 - chr2R 10796832 intron CG33144 - chr2R_7_10795001 chr2R_10795001 D4-c1 780 chr2R 10827330 10827361 chr2R 10827419 10827450 10 87 11.5 13.5 12.5 0.7 120 chr2R 10827330 exon CG12325 + chr2R 10827390 3` UTR CG12325 + chr2R 10827450 3` UTR,3` UTR CG12325 +,CG12344 - chr2R_10_10825001 chr2R_10825001 D4-c1 781 chr2R 10948034 10948061 chr2R 10955586 10955613 17.6 5 7552 6.0 17.0 11.5 0.4 7579 chr2R 10948034 intergenic not near genes chr2R 10951824 intergenic not near genes chr2R 10955613 intergenic not near genes chr2R_5_10950001 chr2R_10950001 D4-c1 782 chr2R 10967252 10967286 chr2R 10967408 10967442 6 156 4.0 0.0 2.0 2.0 190 chr2R 10967252 intergenic not near genes chr2R 10967347 intergenic not near genes chr2R 10967442 intergenic not near genes chr2R_6_10965001 chr2R_10965001 D4-c1 783 chr2R 10979665 10979678 chr2R 10980136 10980149 297 5 471 3.5 5.0 4.2 1.0 484 chr2R 10979665 intergenic not near genes chr2R 10979907 intergenic not near genes chr2R 10980149 intergenic not near genes chr2R_5_10975001 chr2R_10975001 D4-c1 784 chr2R 11009814 11009848 chr2R 11018989 11019007 roo 7 9173 3.5 7.5 5.5 1.1 9193 chr2R 11009814 intron luna - chr2R 11014410 intron luna - chr2R 11019007 intron luna - chr2R_7_11010001 chr2R_11010001 D4-c1 785 chr2R 11019876 11019882 chr2R 11024943 11024949 jockey 6 5067 7.5 4.5 6.0 0.9 5073 chr2R 11019876 intron luna - chr2R 11022412 intron luna - chr2R 11024949 intron luna - chr2R_6_11020001 chr2R_11020001 D4-c1 786 chr2R 11019883 11019909 chr2R 11024942 11024976 jockey 9 5062 3.0 4.5 3.8 1.9 5093 chr2R 11019883 intron luna - chr2R 11022430 intron luna - chr2R 11024976 intron luna - chr2R_9_11020001 chr2R_11020001 D4-c1 787 chr2R 11134109 11134142 chr2R 11134351 11134384 pogo 12 242 2.5 2.0 2.2 3.8 275 chr2R 11134109 intergenic not near genes chr2R 11134246 intergenic not near genes chr2R 11134384 intergenic not near genes chr2R_12_11130001 chr2R_11130001 D4-c1 788 chr2R 11179266 11179289 chr2R 11179353 11179376 13 87 0.5 5.5 3.0 3.2 110 chr2R 11179266 intron shn + chr2R 11179321 intron shn + chr2R 11179376 intron shn + chr2R_13_11175001 chr2R_11175001 D4-c1 789 chr2R 11207813 11207846 chr2R 11208006 11208039 BS 21 193 6.5 4.0 5.2 3.4 226 chr2R 11207813 intron shn + chr2R 11207926 intron shn + chr2R 11208039 intron shn + chr2R_21_11205001 chr2R_11205001 D4-c1 790 chr2R 11253229 11253266 chr2R 11253306 11253343 21 77 8.5 4.5 6.5 2.8 114 chr2R 11253229 intron Cpr47Ea - chr2R 11253286 intron Cpr47Ea - chr2R 11253343 intron Cpr47Ea - chr2R_21_11250001 chr2R_11250001 D4-c1 791 chr2R 11262194 11262223 chr2R 11262283 11262311 15 89 5.0 3.0 4.0 3.0 117 chr2R 11262194 intergenic Cpr47Ed - chr2R 11262252 intergenic Cpr47Ed - chr2R 11262311 intergenic not near genes chr2R_15_11260001 chr2R_11260001 D4-c1 792 chr2R 11276804 11276818 chr2R 11276973 11276987 7 169 5.5 4.0 4.8 1.2 183 chr2R 11276804 intergenic not near genes chr2R 11276896 intergenic not near genes chr2R 11276987 intergenic not near genes chr2R_7_11275001 chr2R_11275001 D4-c1 793 chr2R 11297638 11297651 chr2R 11301960 11301973 flea 8 4322 4.5 2.0 3.2 1.9 4335 chr2R 11297638 intergenic CG42336 - chr2R 11299806 intergenic not near genes chr2R 11301973 5` UTR CG7741 + chr2R_8_11295001 chr2R_11295001 D4-c1 794 chr2R 11344149 11344159 chr2R 11344246 11344256 4 97 0.0 7.0 3.5 0.9 107 chr2R 11344149 intergenic alphaTry - chr2R 11344202 intergenic alphaTry - chr2R 11344256 intergenic alphaTry - chr2R_4_11340001 chr2R_11340001 D4-c1 795 chr2R 11415519 11415545 chr2R 11418669 11418695 opus 10 3150 7.5 9.0 8.2 1.1 3176 chr2R 11415519 intron Drip - chr2R 11417107 intron Drip - chr2R 11418695 intron Drip - chr2R_10_11415001 chr2R_11415001 D4-c1 796 chr2R 11472647 11472677 chr2R 11473845 11473875 pogo 16 1198 5.5 6.0 5.8 2.4 1228 chr2R 11472647 intergenic not near genes chr2R 11473261 intergenic not near genes chr2R 11473875 intergenic not near genes chr2R_16_11470001 chr2R_11470001 D4-c1 797 chr2R 11582721 11582749 chr2R 11625161 11625189 8 42440 27.0 34.5 30.8 0.3 42468 chr2R 11582721 intron tou - chr2R 11603955 intron tou - chr2R 11625189 exon CG9005 - chr2R_8_11600001 chr2R_11600001 D4-c1 798 chr2R 11660365 11660378 chr2R 11660483 11660496 5 118 2.5 1.0 1.8 1.8 131 chr2R 11660365 intron Roc2 - chr2R 11660430 intron Roc2 - chr2R 11660496 intron Roc2 - chr2R_5_11660001 chr2R_11660001 D4-c1 799 chr2R 11724174 11724178 chr2R 11724260 11724264 5 86 3.5 6.5 5.0 0.8 90 chr2R 11724174 intron pyr + chr2R 11724219 intron pyr + chr2R 11724264 intron pyr + chr2R_5_11720001 chr2R_11720001 D4-c1 800 chr2R 11787440 11787467 chr2R 11787527 11787554 14 87 3.5 3.0 3.2 3.3 114 chr2R 11787440 intron ths + chr2R 11787497 intron ths + chr2R 11787554 intron ths + chr2R_14_11785001 chr2R_11785001 D4-c1 801 chr2R 11793006 11793016 chr2R 11793092 11793102 6 86 8.5 0.0 4.2 1.2 96 chr2R 11793006 intron ths + chr2R 11793054 intron ths + chr2R 11793102 intron ths + chr2R_6_11790001 chr2R_11790001 D4-c1 802 chr2R 11830802 11830821 chr2R 11830888 11830907 8 86 4.0 6.5 5.2 1.3 105 chr2R 11830802 intron Sobp - chr2R 11830854 intron Sobp - chr2R 11830907 intron Sobp - chr2R_8_11830001 chr2R_11830001 D4-c1 803 chr2R 11861989 11862021 chr2R 11862075 11862107 15 86 2.5 2.5 2.5 4.3 118 chr2R 11861989 3` UTR CG34230 + chr2R 11862048 intergenic CG34230 +,TwdlBeta - chr2R 11862107 intergenic CG34230 +,TwdlBeta - chr2R_15_11860001 chr2R_11860001 D4-c1 804 chr2R 11951399 11951425 chr2R 11951611 11951637 20 212 0.0 6.5 3.2 4.8 238 chr2R 11951399 intron CG13188 + chr2R 11951518 intron CG13188 + chr2R 11951637 intron CG13188 + chr2R_20_11950001 chr2R_11950001 D4-c1 805 chr2R 12016808 12016842 chr2R 12016892 12016926 8 84 3.0 3.5 3.2 1.9 118 chr2R 12016808 intron otk - chr2R 12016867 intron otk - chr2R 12016926 intron otk - chr2R_8_12015001 chr2R_12015001 D4-c1 806 chr2R 8518782 8518782 chr2R 12066177 12066202 11 3547396 13.0 20.5 16.8 0.6 3547420 chr2R 8518782 intron mtt - chr2R 10292492 intron CAP + chr2R 12066202 intron CG8888 - chr2R_11_10290001 chr2R_10290001 D4-c1 807 chr2R 12095567 12095573 chr2R 12095647 12095653 5 80 0.0 0.5 0.2 4.2 86 chr2R 12095567 intron jeb - chr2R 12095610 intron jeb - chr2R 12095653 intron jeb - chr2R_5_12095001 chr2R_12095001 D4-c1 808 chr2R 12139938 12139975 chr2R 12140027 12140064 11 89 1.5 3.0 2.2 3.4 126 chr2R 12139938 intron skpB - chr2R 12140001 5` UTR skpB - chr2R 12140064 5` UTR skpB - chr2R_11_12140001 chr2R_12140001 D4-c1 809 chr2R 12200970 12200991 chr2R 12201100 12201121 6 130 3.0 1.0 2.0 2.0 151 chr2R 12200970 intergenic RpS11 - chr2R 12201046 intergenic RpS11 - chr2R 12201121 intergenic RpS11 - chr2R_6_12200001 chr2R_12200001 D4-c1 810 chr2R 12334884 12334900 chr2R 12334963 12334978 4 79 5.0 6.0 5.5 0.6 94 chr2R 12334884 intergenic CG8490 + chr2R 12334931 intergenic CG8490 + chr2R 12334978 intergenic CG8490 + chr2R_4_12330001 chr2R_12330001 D4-c1 811 chr2R 12355773 12355809 chr2R 12355858 12355888 17 84 4.5 5.5 5.0 2.8 115 chr2R 12355773 intron CG30049 + chr2R 12355830 exon CG30049 + chr2R 12355888 exon CG30049 + chr2R_17_12355001 chr2R_12355001 D4-c1 812 chr2R 12481139 12481164 chr2R 12482944 12482969 roo 11 1803 4.0 5.5 4.8 1.9 1830 chr2R 12481139 exon Dh44-R2 + chr2R 12482054 intron Dh44-R2 + chr2R 12482969 intron Dh44-R2 + chr2R_11_12480001 chr2R_12480001 D4-c1 813 chr2R 12501697 12501723 chr2R 12503859 12503886 Rt1c 13 2162 2.0 9.0 5.5 2.0 2189 chr2R 12501697 intron fdl - chr2R 12502792 intron fdl - chr2R 12503886 intron fdl - chr2R_13_12500001 chr2R_12500001 D4-c1 814 chr2R 12540475 12540496 chr2R 12540557 12540580 17 83 10.0 6.5 8.2 1.8 105 chr2R 12540475 intron fra + chr2R 12540528 intron fra + chr2R 12540580 intron fra + chr2R_17_12540001 chr2R_12540001 D4-c1 815 chr2R 12552544 12552570 chr2R 12552701 12552728 11 156 4.0 7.5 5.8 1.6 184 chr2R 12552544 intron fra + chr2R 12552636 intron fra + chr2R 12552728 intron fra + chr2R_11_12550001 chr2R_12550001 D4-c1 816 chr2R 12565149 12565182 chr2R 12565231 12565264 10 82 1.0 1.0 1.0 5.0 115 chr2R 12565149 intergenic CG33775 - chr2R 12565206 intergenic CG33775 - chr2R 12565264 intergenic CG33775 - chr2R_10_12565001 chr2R_12565001 D4-c1 817 chr2R 12565565 12565593 chr2R 12565936 12565964 14 371 2.5 4.5 3.5 3.1 399 chr2R 12565565 intergenic not near genes chr2R 12565764 intergenic Cyp301a1 + chr2R 12565964 intergenic Cyp301a1 + chr2R_14_12565001 chr2R_12565001 D4-c1 818 chr2R 12602807 12602828 chr2R 12602892 12602913 7 85 4.0 4.5 4.2 1.3 106 chr2R 12602807 intron Amph + chr2R 12602860 intron Amph + chr2R 12602913 intron Amph + chr2R_7_12600001 chr2R_12600001 D4-c1 819 chr2R 12607746 12607753 chr2R 12607868 12607875 4 122 2.0 4.0 3.0 1.0 129 chr2R 12607746 intron Amph + chr2R 12607810 intron Amph + chr2R 12607875 intron Amph + chr2R_4_12605001 chr2R_12605001 D4-c1 820 chr2R 12643794 12643819 chr2R 12643871 12643897 11 77 2.0 1.5 1.8 3.9 103 chr2R 12643794 intron CG8785 - chr2R 12643846 intron CG8785 - chr2R 12643897 exon CG8785 - chr2R_11_12640001 chr2R_12640001 D4-c1 821 chr2R 12700810 12700846 chr2R 12700905 12700940 11 94 4.5 2.5 3.5 2.4 130 chr2R 12700810 3` UTR wuc + chr2R 12700875 intergenic wuc + chr2R 12700940 intergenic wuc + chr2R_11_12700001 chr2R_12700001 D4-c1 822 chr2R 12702318 12702329 chr2R 12702400 12702411 4 82 8.0 1.5 4.8 0.7 93 chr2R 12702318 intergenic not near genes chr2R 12702364 intergenic not near genes chr2R 12702411 intergenic not near genes chr2R_4_12700001 chr2R_12700001 D4-c1 823 chr2R 12707516 12707548 chr2R 12715883 12715915 roo 11 8367 0.0 2.0 1.0 5.5 8399 chr2R 12707516 intron CG42663 + chr2R 12711716 intron CG42663 + chr2R 12715915 intron CG42663 + chr2R_11_12710001 chr2R_12710001 D4-c1 824 chr2R 12726326 12726347 chr2R 12726419 12726440 5 93 14.5 9.5 12.0 0.4 114 chr2R 12726326 intron CG42663 + chr2R 12726383 intron CG42663 + chr2R 12726440 intron CG42663 + chr2R_5_12725001 chr2R_12725001 D4-c1 825 chr2R 12739140 12739151 chr2R 12739217 12739228 5 77 8.5 13.5 11.0 0.4 88 chr2R 12739140 intron CG42663 + chr2R 12739184 intron CG42663 + chr2R 12739228 intron CG42663 + chr2R_5_12735001 chr2R_12735001 D4-c1 826 chr2R 12777802 12777823 chr2R 12777912 12777933 6 110 0.0 4.0 2.0 2.0 131 chr2R 12777802 5` UTR CR45266 + chr2R 12777868 5` UTR CR45266 + chr2R 12777933 5` UTR CR45266 + chr2R_6_12775001 chr2R_12775001 D4-c1 827 chr2R 12789299 12789324 chr2R 12797663 12797669 roo 9 8362 5.5 5.0 5.2 1.5 8370 chr2R 12789299 intron,3` UTR sca +,CR45137 - chr2R 12793484 intron,intron sca +,CR45137 - chr2R 12797669 intron,3` UTR sca +,CR45137 - chr2R_9_12790001 chr2R_12790001 D4-c1 828 chr2R 12897459 12897480 chr2R 12897551 12897572 9 92 12.5 12.0 12.2 0.7 113 chr2R 12897459 intron vg + chr2R 12897516 intron vg + chr2R 12897572 intron vg + chr2R_9_12895001 chr2R_12895001 D4-c1 829 chr2R 12915836 12915841 chr2R 12915932 12915937 4 96 15.0 15.0 15.0 0.2 101 chr2R 12915836 intergenic NAT1 + chr2R 12915886 intergenic NAT1 + chr2R 12915937 intergenic NAT1 + chr2R_4_12915001 chr2R_12915001 D4-c1 830 chr2R 12988275 12988426 chr2R 12988388 12988531 14 107 0.0 0.0 0.0 14.0 256 chr2R 12988275 intergenic not near genes chr2R 12988403 intergenic not near genes chr2R 12988531 intergenic not near genes chr2R_14_12985001 chr2R_12985001 D4-c1 831 chr2R 13089082 13089109 chr2R 13089217 13089244 16 135 2.0 13.5 7.8 1.8 162 chr2R 13089082 intergenic not near genes chr2R 13089163 intergenic not near genes chr2R 13089244 intergenic not near genes chr2R_16_13085001 chr2R_13085001 D4-c1 832 chr2R 13136840 13136871 chr2R 13141639 13141670 Doc 20 4799 4.0 5.0 4.5 3.6 4830 chr2R 13136840 exon Cap-G + chr2R 13139255 intron Cap-G + chr2R 13141670 intron Cap-G + chr2R_20_13135001 chr2R_13135001 D4-c1 833 chr2R 13220539 13220553 chr2R 13220639 13220653 9 100 0.0 4.0 2.0 3.0 114 chr2R 13220539 intron CG17059 + chr2R 13220596 intron CG17059 + chr2R 13220653 intron CG17059 + chr2R_9_13220001 chr2R_13220001 D4-c1 834 chr2R 13309660 13309683 chr2R 13309779 13309802 9 119 1.5 0.0 0.8 5.0 142 chr2R 13309660 intergenic not near genes chr2R 13309731 intergenic not near genes chr2R 13309802 intergenic not near genes chr2R_9_13305001 chr2R_13305001 D4-c1 835 chr2R 13431488 13431514 chr2R 13431568 13431594 10 80 4.5 4.0 4.2 1.9 106 chr2R 13431488 intron CG42321 - chr2R 13431541 intron CG42321 - chr2R 13431594 intron CG42321 - chr2R_10_13430001 chr2R_13430001 D4-c1 836 chr2R 13449677 13449684 chr2R 13449755 13449762 5 78 0.0 0.0 0.0 5.0 85 chr2R 13449677 intron cnn - chr2R 13449720 intron cnn - chr2R 13449762 intron cnn - chr2R_5_13445001 chr2R_13445001 D4-c1 837 chr2R 13475954 13475978 chr2R 13476040 13476065 4 87 3.0 3.5 3.2 1.0 111 chr2R 13475954 intron arr - chr2R 13476010 intron arr - chr2R 13476065 intron arr - chr2R_4_13475001 chr2R_13475001 D4-c1 838 chr2R 13480128 13480146 chr2R 13480208 13480215 8 77 4.5 3.5 4.0 1.6 87 chr2R 13480128 intron arr - chr2R 13480172 intron arr - chr2R 13480215 intron arr - chr2R_8_13480001 chr2R_13480001 D4-c1 839 chr2R 13547080 13547109 chr2R 13547276 13547305 7 196 6.0 4.0 5.0 1.2 225 chr2R 13547080 intron CG6145 - chr2R 13547192 intron CG6145 - chr2R 13547305 intron CG6145 - chr2R_7_13545001 chr2R_13545001 D4-c1 840 chr2R 13554741 13554771 chr2R 13554827 13554857 8 86 0.0 3.5 1.8 2.9 116 chr2R 13554741 intron Roe1 + chr2R 13554799 intron Roe1 + chr2R 13554857 intron Roe1 + chr2R_8_13550001 chr2R_13550001 D4-c1 841 chr2R 13566257 13566285 chr2R 13566338 13566366 16 81 5.5 0.5 3.0 4.0 109 chr2R 13566257 intergenic not near genes chr2R 13566312 intergenic not near genes chr2R 13566366 intergenic not near genes chr2R_16_13565001 chr2R_13565001 D4-c1 842 chr2R 13580501 13580531 chr2R 13580852 13580882 jockey 14 351 1.0 6.0 3.5 3.1 381 chr2R 13580501 3` UTR CG6191 - chr2R 13580692 3` UTR,3` UTR CG6191 -,CG45088 - chr2R 13580882 3` UTR,3` UTR CG6191 -,CG45088 - chr2R_14_13580001 chr2R_13580001 D4-c1 843 chr2R 13601534 13601539 chr2R 13601612 13601617 4 78 8.5 10.5 9.5 0.4 83 chr2R 13601534 intergenic CG43058 - chr2R 13601576 intergenic CG43058 - chr2R 13601617 intergenic not near genes chr2R_4_13600001 chr2R_13600001 D4-c1 844 chr2R 13632306 13632326 chr2R 13632395 13632414 5 88 10.5 5.0 7.8 0.6 108 chr2R 13632306 intron fas + chr2R 13632360 intron fas + chr2R 13632414 intron fas + chr2R_5_13630001 chr2R_13630001 D4-c1 845 chr2R 13709847 13709854 chr2R 13709941 13709947 4 94 1.0 6.5 3.8 0.8 100 chr2R 13709847 intron fas + chr2R 13709897 intron fas + chr2R 13709947 intron fas + chr2R_4_13705001 chr2R_13705001 D4-c1 846 chr2R 13721205 13721229 chr2R 13721289 13721313 6 84 9.0 4.0 6.5 0.8 108 chr2R 13721205 intron fas + chr2R 13721259 intron fas + chr2R 13721313 intron fas + chr2R_6_13720001 chr2R_13720001 D4-c1 847 chr2R 13728132 13728154 chr2R 13735790 13735812 opus 11 7658 6.5 3.5 5.0 1.8 7680 chr2R 13728132 intron fas + chr2R 13731972 intron fas + chr2R 13735812 intron fas + chr2R_11_13730001 chr2R_13730001 D4-c1 848 chr2R 13801481 13801508 chr2R 13801561 13801588 11 80 2.5 3.5 3.0 2.8 107 chr2R 13801481 intron Cpr50Cb + chr2R 13801534 intron Cpr50Cb + chr2R 13801588 intron Cpr50Cb + chr2R_11_13800001 chr2R_13800001 D4-c1 849 chr2R 13868894 13868928 chr2R 13868974 13869007 11 80 1.5 5.0 3.2 2.6 113 chr2R 13868894 intron shot - chr2R 13868950 intron shot - chr2R 13869007 intron shot - chr2R_11_13865001 chr2R_13865001 D4-c1 850 chr2R 13905601 13905609 chr2R 13907584 13907592 Rt1a 4 1983 9.5 7.5 8.5 0.4 1991 chr2R 13905601 intron shot - chr2R 13906596 intron shot - chr2R 13907592 intron shot - chr2R_4_13905001 chr2R_13905001 D4-c1 851 chr2R 13905611 13905633 chr2R 13907582 13907615 Rt1a 14 1981 5.5 7.5 6.5 1.9 2004 chr2R 13905611 intron shot - chr2R 13906613 intron shot - chr2R 13907615 intron shot - chr2R_14_13905001 chr2R_13905001 D4-c1 852 chr2R 14003989 14004007 chr2R 14004253 14004271 5 264 3.0 3.5 3.2 1.2 282 chr2R 14003989 intron mam + chr2R 14004130 intron mam + chr2R 14004271 intron mam + chr2R_5_14000001 chr2R_14000001 D4-c1 853 chr2R 14018160 14018189 chr2R 14018245 14018274 14 85 1.5 4.5 3.0 3.5 114 chr2R 14018160 intron mam + chr2R 14018217 intron mam + chr2R 14018274 intron mam + chr2R_14_14015001 chr2R_14015001 D4-c1 854 chr2R 14168377 14168396 chr2R 14168467 14168486 11 90 1.5 3.5 2.5 3.1 109 chr2R 14168377 intergenic CG18327 +,CG18324 +,CR44368 - chr2R 14168432 intergenic CG18327 +,CG18324 +,CR44368 - chr2R 14168486 intergenic CG18327 +,CG18324 +,CR44368 - chr2R_11_14165001 chr2R_14165001 D4-c1 855 chr2R 14277581 14277609 chr2R 14277663 14277692 5 83 4.0 4.5 4.2 1.0 111 chr2R 14277581 5` UTR Ih + chr2R 14277636 5` UTR Ih + chr2R 14277692 5` UTR Ih + chr2R_5_14275001 chr2R_14275001 D4-c1 856 chr2R 14294828 14294858 chr2R 14294909 14294939 18 81 6.5 9.0 7.8 2.0 111 chr2R 14294828 intron Ih + chr2R 14294884 intron Ih + chr2R 14294939 intron Ih + chr2R_18_14290001 chr2R_14290001 D4-c1 857 chr2R 14357554 14357577 chr2R 14357645 14357668 8 91 2.0 2.5 2.2 2.5 114 chr2R 14357554 intergenic CG8617 -,Arc1 - chr2R 14357611 intergenic Arc1 -,CG8617 - chr2R 14357668 intergenic Arc1 -,CG8617 - chr2R_8_14355001 chr2R_14355001 D4-c1 858 chr2R 14394231 14394246 chr2R 14399021 14399036 Doc 8 4790 7.5 3.0 5.2 1.3 4805 chr2R 14394231 intergenic not near genes chr2R 14396634 intergenic not near genes chr2R 14399036 intergenic not near genes chr2R_8_14395001 chr2R_14395001 D4-c1 859 chr2R 14467305 14467327 chr2R 14476464 14476476 roo 13 9158 2.0 4.0 3.0 3.2 9171 chr2R 14467305 intergenic not near genes chr2R 14471890 intergenic not near genes chr2R 14476476 5` UTR CR44462 + chr2R_13_14470001 chr2R_14470001 D4-c1 860 chr2R 14514492 14514499 chr2R 14514586 14514593 5 100 4.0 6.5 5.2 0.8 101 chr2R 14514492 intron,intron Cpr51A -,CG30197 + chr2R 14514542 intron,intron Cpr51A -,CG30197 + chr2R 14514593 intron,intron Cpr51A -,CG30197 + chr2R_5_14510001 chr2R_14510001 D4-c1 861 chr2R 14524840 14524873 chr2R 14524938 14524971 7 98 5.5 0.0 2.8 1.8 131 chr2R 14524840 intergenic not near genes chr2R 14524906 intergenic not near genes chr2R 14524971 intergenic not near genes chr2R_7_14520001 chr2R_14520001 D4-c1 862 chr2R 14530741 14530775 chr2R 14530824 14530858 14 83 3.5 1.0 2.2 4.4 117 chr2R 14530741 intron ttv + chr2R 14530800 intron ttv + chr2R 14530858 intron ttv + chr2R_14_14530001 chr2R_14530001 D4-c1 863 chr2R 14707067 14707096 chr2R 14707148 14707177 12 81 3.0 3.0 3.0 3.0 110 chr2R 14707067 intron mspo - chr2R 14707122 intron mspo - chr2R 14707177 intron mspo - chr2R_12_14705001 chr2R_14705001 D4-c1 864 chr2R 14729956 14729987 chr2R 14730041 14730072 14 85 2.5 1.5 2.0 4.7 116 chr2R 14729956 intergenic not near genes chr2R 14730014 intergenic not near genes chr2R 14730072 intergenic not near genes chr2R_14_14730001 chr2R_14730001 D4-c1 865 chr2R 14780434 14780453 chr2R 14780571 14780590 17 136 1.5 6.0 3.8 3.5 156 chr2R 14780434 intron kn - chr2R 14780512 intron kn - chr2R 14780590 intron kn - chr2R_17_14780001 chr2R_14780001 D4-c1 866 chr2R 14799866 14799896 chr2R 14799943 14799973 12 77 2.5 5.5 4.0 2.4 107 chr2R 14799866 intron kn - chr2R 14799920 intron kn - chr2R 14799973 intron kn - chr2R_12_14795001 chr2R_14795001 D4-c1 867 chr2R 14881236 14881271 chr2R 14881380 14881415 15 144 2.0 5.5 3.8 3.1 179 chr2R 14881236 exon Cyp6a9 - chr2R 14881326 5` UTR Cyp6a9 - chr2R 14881415 intergenic Cyp6a9 - chr2R_15_14880001 chr2R_14880001 D4-c1 868 chr2R 14889211 14889236 chr2R 14897820 14897845 Max-element 14 8608 4.5 0.0 2.2 4.4 8634 chr2R 14889211 intergenic Cyp6a8 - chr2R 14893528 intergenic not near genes chr2R 14897845 intergenic not near genes chr2R_14_14890001 chr2R_14890001 D4-c1 869 chr2R 14911699 14911727 chr2R 14911823 14911851 17 124 3.0 4.5 3.8 3.5 152 chr2R 14911699 intron CG10249 - chr2R 14911775 intron CG10249 - chr2R 14911851 intron CG10249 - chr2R_17_14910001 chr2R_14910001 D4-c1 870 chr2R 14917846 14917883 chr2R 14917932 14917969 15 86 5.5 4.0 4.8 2.6 123 chr2R 14917846 intron CG10249 - chr2R 14917908 intron CG10249 - chr2R 14917969 intron CG10249 - chr2R_15_14915001 chr2R_14915001 D4-c1 871 chr2R 14922142 14922169 chr2R 14922219 14922246 15 77 3.0 4.0 3.5 3.3 104 chr2R 14922142 intron CG10249 - chr2R 14922194 intron CG10249 - chr2R 14922246 intron CG10249 - chr2R_15_14920001 chr2R_14920001 D4-c1 872 chr2R 14954745 14954777 chr2R 14954822 14954854 8 77 1.5 3.0 2.2 2.5 109 chr2R 14954745 intron aPKC - chr2R 14954800 intron aPKC - chr2R 14954854 intron aPKC - chr2R_8_14950001 chr2R_14950001 D4-c1 873 chr2R 14957664 14957673 chr2R 14957760 14957769 4 96 4.0 0.0 2.0 1.3 105 chr2R 14957664 intron aPKC - chr2R 14957716 intron aPKC - chr2R 14957769 intron aPKC - chr2R_4_14955001 chr2R_14955001 D4-c1 874 chr2R 15004727 15004761 chr2R 15005057 15005091 jockey 16 330 2.0 6.5 4.2 3.1 364 chr2R 15004727 intergenic not near genes chr2R 15004909 intergenic not near genes chr2R 15005091 intergenic not near genes chr2R_16_15000001 chr2R_15000001 D4-c1 875 chr2R 15015453 15015488 chr2R 15022878 15022913 mdg1 10 7424 3.0 4.5 3.8 2.1 7460 chr2R 15015453 intron hbs + chr2R 15019183 intron hbs + chr2R 15022913 intron hbs + chr2R_10_15015001 chr2R_15015001 D4-c1 876 chr2R 15051083 15051110 chr2R 15051166 15051192 12 83 3.5 3.5 3.5 2.7 109 chr2R 15051083 intergenic not near genes chr2R 15051138 intergenic not near genes chr2R 15051192 intergenic not near genes chr2R_12_15050001 chr2R_15050001 D4-c1 877 chr2R 15110663 15110693 chr2R 15110745 15110774 12 82 5.5 3.5 4.5 2.2 111 chr2R 15110663 intergenic not near genes chr2R 15110718 intergenic not near genes chr2R 15110774 intergenic not near genes chr2R_12_15110001 chr2R_15110001 D4-c1 878 chr2R 15119315 15119350 chr2R 15127797 15127832 Tirant 11 8482 5.0 5.0 5.0 1.8 8517 chr2R 15119315 intron chn + chr2R 15123574 intron chn + chr2R 15127832 intron chn + chr2R_11_15120001 chr2R_15120001 D4-c1 879 chr2R 15296160 15296173 chr2R 15296244 15296257 7 84 5.5 4.0 4.8 1.2 97 chr2R 15296160 intron Trpm - chr2R 15296208 intron Trpm - chr2R 15296257 intron Trpm - chr2R_7_15295001 chr2R_15295001 D4-c1 880 chr2R 15330203 15330223 chr2R 15330338 15330358 8 135 4.0 2.0 3.0 2.0 155 chr2R 15330203 intergenic CR44371 - chr2R 15330280 intergenic CR44371 - chr2R 15330358 intergenic CR44371 - chr2R_8_15330001 chr2R_15330001 D4-c1 881 chr2R 15355023 15355057 chr2R 15355110 15355144 20 86 7.0 6.5 6.8 2.6 121 chr2R 15355023 intron unc-5 + chr2R 15355084 intron unc-5 + chr2R 15355144 intron unc-5 + chr2R_20_15355001 chr2R_15355001 D4-c1 882 chr2R 15362647 15362671 chr2R 15362730 15362754 9 83 3.5 7.0 5.2 1.5 107 chr2R 15362647 intron unc-5 + chr2R 15362700 intron unc-5 + chr2R 15362754 intron unc-5 + chr2R_9_15360001 chr2R_15360001 D4-c1 883 chr2R 15375352 15375360 chr2R 15376170 15376178 4 818 0.0 2.0 1.0 2.0 826 chr2R 15375352 intergenic not near genes chr2R 15375765 intergenic not near genes chr2R 15376178 intergenic dup - chr2R_4_15375001 chr2R_15375001 D4-c1 884 chr2R 15404119 15404123 chr2R 15404217 15404220 4 98 4.0 3.5 3.8 0.8 101 chr2R 15404119 intron CG43729 + chr2R 15404170 intron CG43729 + chr2R 15404220 intron CG43729 + chr2R_4_15400001 chr2R_15400001 D4-c1 885 chr2R 15645676 15645705 chr2R 15645773 15645802 9 94 3.0 0.5 1.8 3.2 126 chr2R 15645676 intron CG42524 + chr2R 15645739 intron CG42524 + chr2R 15645802 intron CG42524 + chr2R_9_15645001 chr2R_15645001 D4-c1 886 chr2R 15794868 15794898 chr2R 15794959 15794989 10 91 1.5 0.0 0.8 5.6 121 chr2R 15794868 intron,5` UTR Zasp52 -,tun + chr2R 15794928 intron,5` UTR Zasp52 -,tun + chr2R 15794989 intron,intron Zasp52 -,tun + chr2R_10_15790001 chr2R_15790001 D4-c1 887 chr2R 15833520 15833553 chr2R 15833608 15833641 15 87 4.5 6.5 5.5 2.3 121 chr2R 15833520 intron,intron tun +,Poxn - chr2R 15833580 intron,intron tun +,Poxn - chr2R 15833641 intron,intron tun +,Poxn - chr2R_15_15830001 chr2R_15830001 D4-c1 888 chr2R 15930379 15930385 chr2R 15930457 15930463 7 78 21.5 0.0 10.8 0.6 84 chr2R 15930379 intron bdg - chr2R 15930421 intron bdg - chr2R 15930463 intron bdg - chr2R_7_15930001 chr2R_15930001 D4-c1 889 chr2R 16054949 16054959 chr2R 16055033 16055043 6 84 18.5 14.5 16.5 0.3 94 chr2R 16054949 intron CG8405 + chr2R 16054996 intron CG8405 + chr2R 16055043 intron CG8405 + chr2R_6_16050001 chr2R_16050001 D4-c1 890 chr2R 16119885 16119919 chr2R 16120010 16120044 19 125 6.5 7.0 6.8 2.4 159 chr2R 16119885 5` UTR Jhe + chr2R 16119964 intron Jhe + chr2R 16120044 intron Jhe + chr2R_19_16115001 chr2R_16115001 D4-c1 891 chr2R 16220710 16220739 chr2R 16220791 16220820 15 81 4.0 6.0 5.0 2.5 110 chr2R 16220710 intron mrj - chr2R 16220765 intron mrj - chr2R 16220820 intron mrj - chr2R_15_16220001 chr2R_16220001 D4-c1 892 chr2R 16245413 16245425 chr2R 16245508 16245520 6 95 3.5 4.0 3.8 1.2 107 chr2R 16245413 intron CngA - chr2R 16245466 intron CngA - chr2R 16245520 intron CngA - chr2R_6_16245001 chr2R_16245001 D4-c1 893 chr2R 16279403 16279520 chr2R 16279489 16279660 11 130 2.5 2.5 2.5 3.1 257 chr2R 16279403 intergenic not near genes chr2R 16279532 intergenic CG15704 + chr2R 16279660 intergenic CG15704 + chr2R_11_16275001 chr2R_16275001 D4-c1 894 chr2R 16352865 16352868 chr2R 16352949 16352952 4 84 4.5 8.0 6.2 0.6 87 chr2R 16352865 intergenic not near genes chr2R 16352908 intergenic not near genes chr2R 16352952 intergenic not near genes chr2R_4_16350001 chr2R_16350001 D4-c1 895 chr2R 16449317 16449337 chr2R 16449565 16449585 10 248 5.0 5.0 5.0 1.7 268 chr2R 16449317 intergenic not near genes chr2R 16449451 intergenic not near genes chr2R 16449585 intergenic not near genes chr2R_10_16445001 chr2R_16445001 D4-c1 896 chr2R 16482886 16482903 chr2R 16483131 16483149 10 246 4.0 4.0 4.0 2.0 263 chr2R 16482886 intergenic not near genes chr2R 16483018 intergenic not near genes chr2R 16483149 intergenic not near genes chr2R_10_16480001 chr2R_16480001 D4-c1 897 chr2R 16518043 16518064 chr2R 16518120 16518140 8 77 1.5 2.0 1.8 2.9 97 chr2R 16518043 intron Sema-2a + chr2R 16518092 intron Sema-2a + chr2R 16518140 intron Sema-2a + chr2R_8_16515001 chr2R_16515001 D4-c1 898 chr2R 16539637 16539670 chr2R 16544847 16544880 copia 13 5210 3.5 1.5 2.5 3.7 5243 chr2R 16539637 intergenic not near genes chr2R 16542258 intergenic not near genes chr2R 16544880 intergenic not near genes chr2R_13_16540001 chr2R_16540001 D4-c1 899 chr2R 16882725 16882747 chr2R 16882850 16882872 12 125 2.5 4.5 3.5 2.7 147 chr2R 16882725 intron,intron CG8910 -,CG6472 + chr2R 16882798 intron,intron CG8910 -,CG6472 + chr2R 16882872 intron,intron CG8910 -,CG6472 + chr2R_12_16880001 chr2R_16880001 D4-c1 900 chr2R 17079052 17079088 chr2R 17079135 17079170 7 82 1.0 0.0 0.5 4.7 118 chr2R 17079052 intron CG30460 - chr2R 17079111 intron CG30460 - chr2R 17079170 intron CG30460 - chr2R_7_17075001 chr2R_17075001 D4-c1 901 chr2R 17132854 17132867 chr2R 17132955 17132968 7 101 1.5 1.5 1.5 2.8 114 chr2R 17132854 intergenic not near genes chr2R 17132911 intergenic not near genes chr2R 17132968 intergenic Acp54A1 + chr2R_7_17130001 chr2R_17130001 D4-c1 902 chr2R 17147238 17147264 chr2R 17152270 17152296 jockey 8 5032 7.0 5.5 6.2 1.1 5058 chr2R 17147238 intergenic not near genes chr2R 17149767 intergenic not near genes chr2R 17152296 intergenic not near genes chr2R_8_17145001 chr2R_17145001 D4-c1 903 chr2R 17161177 17161201 chr2R 17161263 17161287 11 86 3.0 6.0 4.5 2.0 110 chr2R 17161177 intergenic CG30457 - chr2R 17161232 intergenic CG30457 - chr2R 17161287 intergenic CG30457 - chr2R_11_17160001 chr2R_17160001 D4-c1 904 chr2R 17236506 17236540 chr2R 17241711 17241745 copia 13 5205 3.5 5.0 4.2 2.5 5239 chr2R 17236506 intron mbl + chr2R 17239126 intron mbl + chr2R 17241745 intron mbl + chr2R_13_17235001 chr2R_17235001 D4-c1 905 chr2R 17485918 17485931 chr2R 17490689 17490702 F-element 6 4771 5.5 2.0 3.8 1.2 4784 chr2R 17485918 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17488310 intron NT5E-2 + chr2R 17490702 intron NT5E-2 + chr2R_6_17485001 chr2R_17485001 D4-c1 906 chr2R 17610867 17610883 chr2R 17611088 17611105 9 221 3.5 2.5 3.0 2.2 238 chr2R 17610867 intron CG10936 - chr2R 17610986 intron CG10936 - chr2R 17611105 intron CG10936 - chr2R_9_17610001 chr2R_17610001 D4-c1 907 chr2R 17918162 17918194 chr2R 17918240 17918272 8 78 6.0 3.5 4.8 1.4 110 chr2R 17918162 intron Elk + chr2R 17918217 intron Elk + chr2R 17918272 intron Elk + chr2R_8_17915001 chr2R_17915001 D4-c1 908 chr2R 17968597 17968635 chr2R 17968702 17968727 15 104 4.0 10.0 7.0 1.9 130 chr2R 17968597 intergenic not near genes chr2R 17968662 intergenic not near genes chr2R 17968727 intergenic not near genes chr2R_15_17965001 chr2R_17965001 D4-c1 909 chr2R 18021486 18021551 chr2R 18021972 18022037 11 481 10.5 7.5 9.0 1.1 551 chr2R 18021486 exon CG10910 + chr2R 18021762 exon CG10910 + chr2R 18022037 exon CG10910 + chr2R_11_18020001 chr2R_18020001 D4-c1 910 chr2R 18045673 18045702 chr2R 18046026 18046055 jockey 8 353 2.5 2.0 2.2 2.5 382 chr2R 18045673 intergenic not near genes chr2R 18045864 intergenic not near genes chr2R 18046055 intergenic CG5767 - chr2R_8_18045001 chr2R_18045001 D4-c1 911 chr2R 18111688 18111709 chr2R 18115557 18115578 F-element 6 3869 7.0 4.5 5.8 0.9 3890 chr2R 18111688 intergenic not near genes chr2R 18113633 intergenic not near genes chr2R 18115578 intergenic not near genes chr2R_6_18110001 chr2R_18110001 D4-c1 912 chr2R 18124344 18124372 chr2R 18124422 18124450 20 77 3.0 8.0 5.5 3.1 106 chr2R 18124344 intron stau - chr2R 18124397 intron stau - chr2R 18124450 intron stau - chr2R_20_18120001 chr2R_18120001 D4-c1 913 chr2R 18142917 18142924 chr2R 18143157 18143164 5 240 33.5 16.5 25.0 0.2 247 chr2R 18142917 intron,5` UTR pAbp +,snoRNA:Psi18S-1347a + chr2R 18143040 intron,5` UTR pAbp +,snoRNA:Psi18S-1347b + chr2R 18143164 intron pAbp + chr2R_5_18140001 chr2R_18140001 D4-c1 914 chr2R 18207314 18207352 chr2R 18207403 18207441 22 89 5.5 3.5 4.5 4.0 127 chr2R 18207314 intergenic CG30114 + chr2R 18207378 intergenic CG30114 + chr2R 18207441 intergenic CG30114 + chr2R_22_18205001 chr2R_18205001 D4-c1 915 chr2R 18260879 18260882 chr2R 18261025 18261028 4 146 0.5 0.0 0.2 3.3 149 chr2R 18260879 intergenic not near genes chr2R 18260954 intergenic not near genes chr2R 18261028 intergenic not near genes chr2R_4_18260001 chr2R_18260001 D4-c1 916 chr2R 18358386 18358419 chr2R 18372599 18372632 roo 16 14213 5.0 3.5 4.2 3.1 14246 chr2R 18358386 intergenic not near genes chr2R 18365509 intergenic not near genes chr2R 18372632 intergenic not near genes chr2R_16_18365001 chr2R_18365001 D4-c1 917 chr2R 18398157 18398187 chr2R 18398253 18398282 9 95 10.5 9.5 10.0 0.8 125 chr2R 18398157 intron GstE10 - chr2R 18398220 intron GstE10 - chr2R 18398282 intron GstE10 - chr2R_9_18395001 chr2R_18395001 D4-c1 918 chr2R 18487846 18487854 chr2R 18495317 18495325 blood 5 7471 1.0 8.0 4.5 0.9 7479 chr2R 18487846 intron CG30116 - chr2R 18491586 intron CG30116 - chr2R 18495325 intron CG30116 - chr2R_5_18490001 chr2R_18490001 D4-c1 919 chr2R 18507968 18507979 chr2R 18508290 18508300 4 322 15.0 11.5 13.2 0.3 332 chr2R 18507968 intergenic not near genes chr2R 18508134 intergenic not near genes chr2R 18508300 intergenic not near genes chr2R_4_18505001 chr2R_18505001 D4-c1 920 chr2R 18527782 18527813 chr2R 18527904 18527935 6 122 18.0 16.0 17.0 0.3 153 chr2R 18527782 exon CG10924 + chr2R 18527858 intron CG10924 + chr2R 18527935 intron CG10924 + chr2R_6_18525001 chr2R_18525001 D4-c1 921 chr2R 18528193 18528222 chr2R 18528279 18528303 21 83 6.0 4.5 5.2 3.4 110 chr2R 18528193 intron CG10924 + chr2R 18528248 intron CG10924 + chr2R 18528303 intron CG10924 + chr2R_21_18525001 chr2R_18525001 D4-c1 922 chr2R 18534004 18534033 chr2R 18534094 18534123 9 87 20.0 23.0 21.5 0.4 119 chr2R 18534004 exon CG10924 + chr2R 18534064 exon CG10924 + chr2R 18534123 exon CG10924 + chr2R_9_18530001 chr2R_18530001 D4-c1 923 chr2R 18575811 18575829 chr2R 18581988 18582018 3S18 10 6186 5.5 9.0 7.2 1.2 6207 chr2R 18575811 intron GEFmeso - chr2R 18578914 intron GEFmeso - chr2R 18582018 intron GEFmeso - chr2R_10_18575001 chr2R_18575001 D4-c1 924 chr2R 18590864 18590900 chr2R 18600017 18600052 roo 16 9153 3.5 4.0 3.8 3.3 9188 chr2R 18590864 intron GEFmeso - chr2R 18595458 intron GEFmeso - chr2R 18600052 intron GEFmeso - chr2R_16_18595001 chr2R_18595001 D4-c1 925 chr2R 18646412 18646429 chr2R 18646558 18646575 12 146 3.0 3.5 3.2 2.9 163 chr2R 18646412 intron SP2637 - chr2R 18646494 intron SP2637 - chr2R 18646575 intron SP2637 - chr2R_12_18645001 chr2R_18645001 D4-c1 926 chr2R 18713237 18713269 chr2R 18713315 18713347 14 78 5.5 2.0 3.8 2.9 110 chr2R 18713237 intergenic not near genes chr2R 18713292 intergenic not near genes chr2R 18713347 intergenic not near genes chr2R_14_18710001 chr2R_18710001 D4-c1 927 chr2R 18738209 18738240 chr2R 18738286 18738317 10 77 2.5 3.0 2.8 2.6 108 chr2R 18738209 intron Hs3st-A + chr2R 18738263 intron Hs3st-A + chr2R 18738317 intron Hs3st-A + chr2R_10_18735001 chr2R_18735001 D4-c1 928 chr2R 18808062 18808087 chr2R 18808152 18808177 10 89 0.0 0.5 0.2 8.3 115 chr2R 18808062 intergenic CG15096 - chr2R 18808120 intergenic CG15096 - chr2R 18808177 intergenic CG15096 - chr2R_10_18805001 chr2R_18805001 D4-c1 929 chr2R 18862306 18862319 chr2R 18862394 18862407 7 88 1.0 0.0 0.5 4.7 101 chr2R 18862306 intergenic Jheh3 - chr2R 18862356 intergenic Jheh3 - chr2R 18862407 intergenic Jheh3 -,CG43069 + chr2R_7_18860001 chr2R_18860001 D4-c1 930 chr2R 18904430 18904461 chr2R 18904599 18904630 12 165 19.0 20.0 19.5 0.6 200 chr2R 18904430 intron sano + chr2R 18904530 intron sano + chr2R 18904630 intron sano + chr2R_12_18900001 chr2R_18900001 D4-c1 931 chr2R 18953157 18953189 chr2R 18953245 18953277 8 88 10.5 9.5 10.0 0.7 120 chr2R 18953157 intron sano + chr2R 18953217 intron sano + chr2R 18953277 intron sano + chr2R_8_18950001 chr2R_18950001 D4-c1 932 chr2R 18964923 18964951 chr2R 18965000 18965028 8 77 16.0 14.0 15.0 0.5 105 chr2R 18964923 intergenic not near genes chr2R 18964976 intergenic not near genes chr2R 18965028 intergenic not near genes chr2R_8_18960001 chr2R_18960001 D4-c1 933 chr2R 18989025 18989047 chr2R 18989104 18989126 5 79 8.5 8.0 8.2 0.5 101 chr2R 18989025 intron tn + chr2R 18989076 intron tn + chr2R 18989126 intron tn + chr2R_5_18985001 chr2R_18985001 D4-c1 934 chr2R 18992015 18992048 chr2R 18992157 18992190 13 142 7.5 8.0 7.8 1.5 175 chr2R 18992015 intron tn + chr2R 18992102 intron tn + chr2R 18992190 intron tn + chr2R_13_18990001 chr2R_18990001 D4-c1 935 chr2R 19026052 19026061 chr2R 19026154 19026163 5 102 8.0 0.0 4.0 1.0 111 chr2R 19026052 intron 5-HT1B - chr2R 19026108 intron 5-HT1B - chr2R 19026163 intron 5-HT1B - chr2R_5_19025001 chr2R_19025001 D4-c1 936 chr2R 19038888 19038919 chr2R 19039020 19039051 10 132 17.5 13.5 15.5 0.6 163 chr2R 19038888 intergenic not near genes chr2R 19038970 intergenic not near genes chr2R 19039051 intergenic not near genes chr2R_10_19035001 chr2R_19035001 D4-c1 937 chr2R 19067727 19067752 chr2R 19067804 19067829 4 77 6.0 6.5 6.2 0.6 102 chr2R 19067727 intron 5-HT1A + chr2R 19067778 intron 5-HT1A + chr2R 19067829 intron 5-HT1A + chr2R_4_19065001 chr2R_19065001 D4-c1 938 chr2R 19072108 19072136 chr2R 19072184 19072213 9 75 17.0 13.5 15.2 0.6 105 chr2R 19072108 intron 5-HT1A + chr2R 19072160 intron 5-HT1A + chr2R 19072213 intron 5-HT1A + chr2R_9_19070001 chr2R_19070001 D4-c1 939 chr2R 19124414 19124425 chr2R 19124497 19124508 5 83 15.5 18.5 17.0 0.3 94 chr2R 19124414 exon CG15117 - chr2R 19124461 intron CG15117 - chr2R 19124508 intron CG15117 - chr2R_5_19120001 chr2R_19120001 D4-c1 940 chr2R 19168743 19168754 chr2R 19168825 19168836 5 82 10.0 7.0 8.5 0.5 93 chr2R 19168743 intron CG10737 + chr2R 19168790 intron CG10737 + chr2R 19168836 intron CG10737 + chr2R_5_19165001 chr2R_19165001 D4-c1 941 chr2R 19183344 19183374 chr2R 19183421 19183451 6 74 16.0 13.5 14.8 0.4 107 chr2R 19183344 intron hppy + chr2R 19183398 intron hppy + chr2R 19183451 intron hppy + chr2R_6_19180001 chr2R_19180001 D4-c1 942 chr2R 19222107 19222132 chr2R 19222545 19222570 7 438 12.0 4.5 8.2 0.8 463 chr2R 19222107 intron hppy + chr2R 19222338 intron hppy + chr2R 19222570 intron hppy + chr2R_7_19220001 chr2R_19220001 D4-c1 943 chr2R 19295941 19295965 chr2R 19296205 19296229 4 264 2.5 3.0 2.8 1.1 288 chr2R 19295941 intron Tab2 + chr2R 19296085 intron Tab2 + chr2R 19296229 intron Tab2 + chr2R_4_19295001 chr2R_19295001 D4-c1 944 chr2R 19300962 19300987 chr2R 19301045 19301071 10 84 3.5 5.5 4.5 1.8 109 chr2R 19300962 intron Tab2 + chr2R 19301016 intron Tab2 + chr2R 19301071 intron Tab2 + chr2R_10_19300001 chr2R_19300001 D4-c1 945 chr2R 19376139 19376146 chr2R 19376333 19376340 4 194 1.0 5.5 3.2 1.0 201 chr2R 19376139 intron CG10062 + chr2R 19376240 intron CG10062 + chr2R 19376340 intron CG10062 + chr2R_4_19375001 chr2R_19375001 D4-c1 946 chr2R 19385294 19385310 chr2R 19385585 19385601 5 291 2.5 3.0 2.8 1.3 307 chr2R 19385294 intergenic CG10073 + chr2R 19385448 intergenic CG10081 +,CG10073 + chr2R 19385601 intergenic CG10081 + chr2R_5_19385001 chr2R_19385001 D4-c1 947 chr2R 19388498 19388529 chr2R 19388592 19388623 20 94 5.5 6.0 5.8 2.9 125 chr2R 19388498 intron CG10081 + chr2R 19388560 exon CG10081 + chr2R 19388623 exon CG10081 + chr2R_20_19385001 chr2R_19385001 D4-c1 948 chr2R 19411814 19411836 chr2R 19411973 19411995 12 159 2.0 1.5 1.8 4.3 181 chr2R 19411814 intron hts - chr2R 19411904 intron hts - chr2R 19411995 intron hts - chr2R_12_19410001 chr2R_19410001 D4-c1 949 chr2R 19498727 19498762 chr2R 19498809 19498844 17 81 4.5 8.0 6.2 2.4 117 chr2R 19498727 intron CG15120 + chr2R 19498786 intron CG15120 + chr2R 19498844 intron CG15120 + chr2R_17_19495001 chr2R_19495001 D4-c1 950 chr2R 19539146 19539175 chr2R 19539238 19539267 15 92 5.5 4.5 5.0 2.5 121 chr2R 19539146 intron sm - chr2R 19539206 intron sm - chr2R 19539267 intron sm - chr2R_15_19535001 chr2R_19535001 D4-c1 951 chr2R 19544821 19544850 chr2R 19544902 19544931 11 80 4.0 8.5 6.2 1.5 110 chr2R 19544821 intron sm - chr2R 19544876 intron sm - chr2R 19544931 intron sm - chr2R_11_19540001 chr2R_19540001 D4-c1 952 chr2R 19774009 19774036 chr2R 19774123 19774150 7 114 3.0 2.0 2.5 2.0 141 chr2R 19774009 intergenic not near genes chr2R 19774080 intergenic not near genes chr2R 19774150 intergenic not near genes chr2R_7_19770001 chr2R_19770001 D4-c1 953 chr2R 19776593 19776630 chr2R 19779917 19779954 jockey 16 3324 3.5 5.5 4.5 2.9 3361 chr2R 19776593 intergenic not near genes chr2R 19778274 intergenic not near genes chr2R 19779954 intergenic not near genes chr2R_16_19775001 chr2R_19775001 D4-c1 954 chr2R 19794867 19794904 chr2R 19794971 19795010 8 103 3.0 6.5 4.8 1.4 143 chr2R 19794867 intergenic not near genes chr2R 19794938 intergenic not near genes chr2R 19795010 intergenic not near genes chr2R_8_19790001 chr2R_19790001 D4-c1 955 chr2R 19807672 19807703 chr2R 19807755 19807786 11 83 4.5 4.0 4.2 2.1 114 chr2R 19807672 intergenic not near genes chr2R 19807729 intergenic not near genes chr2R 19807786 intergenic not near genes chr2R_11_19805001 chr2R_19805001 D4-c1 956 chr2R 19914846 19914875 chr2R 19922259 19922288 mdg1 8 7413 5.5 5.0 5.2 1.3 7442 chr2R 19914846 intergenic not near genes chr2R 19918567 intergenic not near genes chr2R 19922288 intergenic not near genes chr2R_8_19915001 chr2R_19915001 D4-c1 957 chr2R 19922609 19922621 chr2R 19922687 19922699 6 76 7.5 9.5 8.5 0.6 90 chr2R 19922609 intergenic not near genes chr2R 19922654 intergenic not near genes chr2R 19922699 intergenic not near genes chr2R_6_19920001 chr2R_19920001 D4-c1 958 chr2R 19940575 19940601 chr2R 19940986 19941005 9 410 3.5 2.0 2.8 2.4 430 chr2R 19940575 intergenic CR43421 - chr2R 19940790 intergenic CR43421 - chr2R 19941005 intergenic CR43421 - chr2R_9_19940001 chr2R_19940001 D4-c1 959 chr2R 19957429 19957462 chr2R 19962632 19962665 copia 13 5199 2.0 6.5 4.2 2.5 5236 chr2R 19957429 intergenic CG44623 + chr2R 19960047 intergenic not near genes chr2R 19962665 intergenic not near genes chr2R_13_19960001 chr2R_19960001 D4-c1 960 chr2R 20020395 20020428 chr2R 20020608 20020622 11 211 11.0 14.0 12.5 0.8 227 chr2R 20020395 intergenic not near genes chr2R 20020508 intergenic not near genes chr2R 20020622 intergenic not near genes chr2R_11_20020001 chr2R_20020001 D4-c1 961 chr2R 20069243 20069275 chr2R 20071874 20071895 opus 16 2630 6.5 6.5 6.5 2.1 2652 chr2R 20069243 intergenic not near genes chr2R 20070569 intergenic not near genes chr2R 20071895 intergenic not near genes chr2R_16_20070001 chr2R_20070001 D4-c1 962 chr2R 20125734 20125748 chr2R 20125811 20125825 8 77 6.5 5.5 6.0 1.1 91 chr2R 20125734 intergenic not near genes chr2R 20125780 intergenic not near genes chr2R 20125825 intergenic not near genes chr2R_8_20125001 chr2R_20125001 D4-c1 963 chr2R 20174642 20174677 chr2R 20174719 20174754 23 76 1.0 6.0 3.5 5.1 112 chr2R 20174642 intergenic not near genes chr2R 20174698 intergenic not near genes chr2R 20174754 intergenic not near genes chr2R_23_20170001 chr2R_20170001 D4-c1 964 chr2R 20338756 20338778 chr2R 20338837 20338859 6 81 3.5 0.0 1.8 2.1 103 chr2R 20338756 intergenic not near genes chr2R 20338808 intergenic not near genes chr2R 20338859 intergenic not near genes chr2R_6_20335001 chr2R_20335001 D4-c1 965 chr2R 20359362 20359365 chr2R 20359442 20359449 6 83 5.0 14.0 9.5 0.6 87 chr2R 20359362 intergenic not near genes chr2R 20359406 intergenic not near genes chr2R 20359449 intergenic not near genes chr2R_6_20355001 chr2R_20355001 D4-c1 966 chr2R 20395170 20395190 chr2R 20395249 20395269 8 79 4.0 2.5 3.2 1.9 99 chr2R 20395170 intergenic not near genes chr2R 20395220 intergenic not near genes chr2R 20395269 intergenic not near genes chr2R_8_20395001 chr2R_20395001 D4-c1 967 chr2R 20432479 20432504 chr2R 20432576 20432601 7 93 8.0 5.0 6.5 0.9 122 chr2R 20432479 intron CG12484 + chr2R 20432540 intron CG12484 + chr2R 20432601 intron CG12484 + chr2R_7_20430001 chr2R_20430001 D4-c1 968 chr2R 20572570 20572585 chr2R 20572661 20572676 5 91 0.0 2.0 1.0 2.5 106 chr2R 20572570 intron qsm - chr2R 20572623 intron qsm - chr2R 20572676 intron qsm - chr2R_5_20570001 chr2R_20570001 D4-c1 969 chr2R 20690757 20690789 chr2R 20690834 20690866 13 77 17.5 19.5 18.5 0.7 109 chr2R 20690757 intergenic not near genes chr2R 20690812 intergenic not near genes chr2R 20690866 intergenic not near genes chr2R_13_20690001 chr2R_20690001 D4-c1 970 chr2R 20739440 20739476 chr2R 20744209 20744245 F-element 16 4769 5.5 3.5 4.5 2.9 4805 chr2R 20739440 intron dpr + chr2R 20741842 intron dpr + chr2R 20744245 intron dpr + chr2R_16_20740001 chr2R_20740001 D4-c1 971 chr2R 20783314 20783332 chr2R 20788087 20788105 F-element 7 4773 4.0 7.0 5.5 1.1 4791 chr2R 20783314 intergenic not near genes chr2R 20785710 intergenic not near genes chr2R 20788105 intergenic CG43666 - chr2R_7_20785001 chr2R_20785001 D4-c1 972 chr2R 20796049 20796076 chr2R 20796163 20796190 7 114 8.5 10.0 9.2 0.7 141 chr2R 20796049 intergenic not near genes chr2R 20796120 intergenic not near genes chr2R 20796190 intergenic not near genes chr2R_7_20795001 chr2R_20795001 D4-c1 973 chr2R 20838058 20838082 chr2R 20838140 20838164 5 82 0.0 4.0 2.0 1.7 106 chr2R 20838058 intron CR44667 + chr2R 20838111 intron CR44667 + chr2R 20838164 intron CR44667 + chr2R_5_20835001 chr2R_20835001 D4-c1 974 chr2R 20848928 20848962 chr2R 20849014 20849049 11 86 10.0 4.5 7.2 1.3 121 chr2R 20848928 exon CG17999 - chr2R 20848988 intron CG17999 - chr2R 20849049 intron CG17999 - chr2R_11_20845001 chr2R_20845001 D4-c1 975 chr2R 20962907 20962933 chr2R 20963006 20963032 18 99 6.0 4.5 5.2 2.9 125 chr2R 20962907 intergenic not near genes chr2R 20962970 intergenic not near genes chr2R 20963032 intergenic not near genes chr2R_18_20960001 chr2R_20960001 D4-c1 976 chr2R 20967025 20967055 chr2R 20967103 20967133 6 78 4.0 0.5 2.2 1.9 108 chr2R 20967025 intergenic not near genes chr2R 20967079 intergenic not near genes chr2R 20967133 intergenic not near genes chr2R_6_20965001 chr2R_20965001 D4-c1 977 chr2R 20970386 20970418 chr2R 20970502 20970534 15 116 2.0 2.0 2.0 5.0 148 chr2R 20970386 intergenic not near genes chr2R 20970460 intergenic not near genes chr2R 20970534 intergenic not near genes chr2R_15_20970001 chr2R_20970001 D4-c1 978 chr2R 21040867 21040875 chr2R 21040944 21040952 4 77 11.5 10.0 10.8 0.3 85 chr2R 21040867 intergenic not near genes chr2R 21040910 intergenic not near genes chr2R 21040952 intergenic not near genes chr2R_4_21040001 chr2R_21040001 D4-c1 979 chr2R 21056689 21056719 chr2R 21056771 21056801 9 82 14.5 16.5 15.5 0.5 112 chr2R 21056689 5` UTR shg - chr2R 21056745 5` UTR shg - chr2R 21056801 5` UTR shg - chr2R_9_21055001 chr2R_21055001 D4-c1 980 chr2R 21057485 21057496 chr2R 21057567 21057578 4 82 6.0 6.5 6.2 0.6 93 chr2R 21057485 intergenic shg -,cpa + chr2R 21057532 intergenic cpa +,shg - chr2R 21057578 intergenic cpa +,shg - chr2R_4_21055001 chr2R_21055001 D4-c1 981 chr2R 21088198 21088213 chr2R 21088288 21088303 9 90 16.5 12.0 14.2 0.6 105 chr2R 21088198 intron Treh + chr2R 21088250 intron Treh + chr2R 21088303 intron Treh + chr2R_9_21085001 chr2R_21085001 D4-c1 982 chr2R 21141117 21141138 chr2R 21141214 21141235 5 97 11.5 13.0 12.2 0.4 118 chr2R 21141117 intron Magi - chr2R 21141176 intron Magi - chr2R 21141235 intron Magi - chr2R_5_21140001 chr2R_21140001 D4-c1 983 chr2R 21151116 21151141 chr2R 21153750 21153775 opus 10 2634 8.0 7.5 7.8 1.1 2659 chr2R 21151116 intron CG30389 - chr2R 21152446 intron CG30389 - chr2R 21153775 intron CG30389 - chr2R_10_21150001 chr2R_21150001 D4-c1 984 chr2R 21217323 21217330 chr2R 21217411 21217418 4 88 10.0 10.0 10.0 0.4 95 chr2R 21217323 exon CG15661 - chr2R 21217370 5` UTR CG15661 - chr2R 21217418 5` UTR CG15661 - chr2R_4_21215001 chr2R_21215001 D4-c1 985 chr2R 21247709 21247732 chr2R 21247793 21247816 6 84 5.0 2.0 3.5 1.3 107 chr2R 21247709 intron ASPP - chr2R 21247762 intron ASPP - chr2R 21247816 intron ASPP - chr2R_6_21245001 chr2R_21245001 D4-c1 986 chr2R 21251823 21251848 chr2R 21252051 21252076 8 228 7.5 10.5 9.0 0.8 253 chr2R 21251823 intergenic not near genes chr2R 21251950 intergenic not near genes chr2R 21252076 intergenic not near genes chr2R_8_21250001 chr2R_21250001 D4-c1 987 chr2R 21322937 21322974 chr2R 21323021 21323059 10 84 8.5 12.5 10.5 0.9 122 chr2R 21322937 5` UTR CG30394 - chr2R 21322998 5` UTR CG30394 - chr2R 21323059 5` UTR CG30394 - chr2R_10_21320001 chr2R_21320001 D4-c1 988 chr2R 21364176 21364181 chr2R 21364254 21364259 5 78 11.0 12.5 11.8 0.4 83 chr2R 21364176 intron cv-2 - chr2R 21364218 intron cv-2 - chr2R 21364259 intron cv-2 - chr2R_5_21360001 chr2R_21360001 D4-c1 989 chr2R 21408570 21408589 chr2R 21408888 21408906 4 318 13.5 19.5 16.5 0.2 336 chr2R 21408570 intron Sdc - chr2R 21408738 intron Sdc - chr2R 21408906 intron Sdc - chr2R_4_21405001 chr2R_21405001 D4-c1 990 chr2R 21417276 21417283 chr2R 21417378 21417385 5 102 9.5 0.5 5.0 0.8 109 chr2R 21417276 intron Sdc - chr2R 21417330 intron Sdc - chr2R 21417385 intron Sdc - chr2R_5_21415001 chr2R_21415001 D4-c1 991 chr2R 21424056 21424073 chr2R 21424486 21424500 5 429 15.5 13.5 14.5 0.3 444 chr2R 21424056 intron Sdc - chr2R 21424278 intron Sdc - chr2R 21424500 intron Sdc - chr2R_5_21420001 chr2R_21420001 D4-c1 992 chr2R 21546788 21546816 chr2R 21546870 21546898 14 80 6.5 3.5 5.0 2.3 110 chr2R 21546788 intron Egfr + chr2R 21546843 intron Egfr + chr2R 21546898 intron Egfr + chr2R_14_21545001 chr2R_21545001 D4-c1 993 chr2R 21562783 21562804 chr2R 21562870 21562879 6 84 18.0 15.0 16.5 0.3 96 chr2R 21562783 intron CG10440 - chr2R 21562831 intron CG10440 - chr2R 21562879 intron CG10440 - chr2R_6_21560001 chr2R_21560001 D4-c1 994 chr2R 21593575 21593607 chr2R 21594285 21594318 12 709 19.0 19.5 19.2 0.6 743 chr2R 21593575 intergenic not near genes chr2R 21593946 intergenic not near genes chr2R 21594318 intergenic not near genes chr2R_12_21590001 chr2R_21590001 D4-c1 995 chr2R 21605919 21605949 chr2R 21606004 21606028 6 84 15.0 13.0 14.0 0.4 109 chr2R 21605919 3` UTR CG10433 - chr2R 21605974 3` UTR CG10433 - chr2R 21606028 3` UTR CG10433 - chr2R_6_21605001 chr2R_21605001 D4-c1 996 chr2R 21660877 21660908 chr2R 21660971 21661002 10 94 13.5 12.5 13.0 0.7 125 chr2R 21660877 intergenic pirk - chr2R 21660940 intergenic pirk - chr2R 21661002 3` UTR pirk - chr2R_10_21660001 chr2R_21660001 D4-c1 997 chr2R 21700153 21700186 chr2R 21700240 21700273 15 86 4.0 5.5 4.8 2.6 120 chr2R 21700153 intron HmgZ - chr2R 21700213 intron HmgZ - chr2R 21700273 intron HmgZ - chr2R_15_21700001 chr2R_21700001 D4-c1 998 chr2R 21721576 21721611 chr2R 21721665 21721700 9 88 13.5 16.0 14.8 0.6 124 chr2R 21721576 intron LBR + chr2R 21721638 intron LBR + chr2R 21721700 intron LBR + chr2R_9_21720001 chr2R_21720001 D4-c1 999 chr2R 21738280 21738310 chr2R 21747441 21747471 roo 12 9158 2.0 6.0 4.0 2.4 9191 chr2R 21738280 intergenic not near genes chr2R 21742876 intergenic not near genes chr2R 21747471 intergenic not near genes chr2R_12_21740001 chr2R_21740001 D4-c1 1000 chr2R 21753081 21753113 chr2R 21753567 21753599 roo 9 486 3.5 3.0 3.2 2.1 518 chr2R 21753081 intergenic not near genes chr2R 21753340 intergenic not near genes chr2R 21753599 intergenic not near genes chr2R_9_21750001 chr2R_21750001 D4-c1 1001 chr2R 21809523 21809551 chr2R 21817764 21817792 roo 14 8241 7.0 2.5 4.8 2.4 8269 chr2R 21809523 intergenic not near genes chr2R 21813658 intergenic not near genes chr2R 21817792 intergenic not near genes chr2R_14_21810001 chr2R_21810001 D4-c1 1002 chr2R 21857345 21857371 chr2R 21857437 21857437 7 88 17.0 17.5 17.2 0.4 92 chr2R 21857345 intergenic not near genes chr2R 21857391 intergenic not near genes chr2R 21857437 intergenic not near genes chr2R_7_21855001 chr2R_21855001 D4-c1 1003 chr2R 21858928 21858954 chr2R 21859006 21859031 6 78 7.5 8.0 7.8 0.7 103 chr2R 21858928 intergenic not near genes chr2R 21858980 intergenic not near genes chr2R 21859031 intergenic not near genes chr2R_6_21855001 chr2R_21855001 D4-c1 1004 chr2R 21886132 21886161 chr2R 21886212 21886241 10 80 5.5 0.5 3.0 2.5 109 chr2R 21886132 intron Fili + chr2R 21886186 intron Fili + chr2R 21886241 intron Fili + chr2R_10_21885001 chr2R_21885001 D4-c1 1005 chr2R 21906269 21906301 chr2R 21906371 21906403 11 102 3.5 1.0 2.2 3.4 134 chr2R 21906269 intron Fili + chr2R 21906336 intron Fili + chr2R 21906403 intron Fili + chr2R_11_21905001 chr2R_21905001 D4-c1 1006 chr2R 21922595 21922623 chr2R 21922673 21922701 13 78 4.5 4.0 4.2 2.5 106 chr2R 21922595 intron Fili + chr2R 21922648 intron Fili + chr2R 21922701 intron Fili + chr2R_13_21920001 chr2R_21920001 D4-c1 1007 chr2R 21932251 21932282 chr2R 21932330 21932361 20 79 3.0 5.5 4.2 3.8 110 chr2R 21932251 intron Fili + chr2R 21932306 intron Fili + chr2R 21932361 intron Fili + chr2R_20_21930001 chr2R_21930001 D4-c1 1008 chr2R 21985540 21985558 chr2R 21985622 21985640 10 82 5.0 3.0 4.0 2.0 100 chr2R 21985540 intergenic CG30401 - chr2R 21985590 intergenic CG30401 - chr2R 21985640 3` UTR CG30401 - chr2R_10_21985001 chr2R_21985001 D4-c1 1009 chr2R 22003093 22003119 chr2R 22003180 22003206 11 87 7.0 7.5 7.2 1.3 113 chr2R 22003093 intron CG34370 - chr2R 22003150 intron CG34370 - chr2R 22003206 intron CG34370 - chr2R_11_22000001 chr2R_22000001 D4-c1 1010 chr2R 22004297 22004311 chr2R 22004392 22004406 5 94 9.0 0.0 4.5 0.9 109 chr2R 22004297 intron CG34370 - chr2R 22004352 intron CG34370 - chr2R 22004406 intron CG34370 - chr2R_5_22000001 chr2R_22000001 D4-c1 1011 chr2R 22033827 22033860 chr2R 22033914 22033947 16 87 0.5 6.0 3.2 3.8 120 chr2R 22033827 intron CG34370 - chr2R 22033887 intron CG34370 - chr2R 22033947 intron CG34370 - chr2R_16_22030001 chr2R_22030001 D4-c1 1012 chr2R 22040152 22040182 chr2R 22040234 22040237 11 79 1.5 3.0 2.2 3.4 85 chr2R 22040152 intergenic not near genes chr2R 22040194 intergenic not near genes chr2R 22040237 intergenic not near genes chr2R_11_22040001 chr2R_22040001 D4-c1 1013 chr2R 22047987 22048024 chr2R 22048116 22048153 27 127 8.5 6.0 7.2 3.3 166 chr2R 22047987 intergenic not near genes chr2R 22048070 intergenic not near genes chr2R 22048153 intergenic not near genes chr2R_27_22045001 chr2R_22045001 D4-c1 1014 chr2R 22182912 22182933 chr2R 22182997 22183018 7 85 1.5 2.0 1.8 2.5 106 chr2R 22182912 intergenic CG11170 -,MED16 +,CG11275 + chr2R 22182965 intergenic CG11170 -,MED16 +,CG11275 + chr2R 22183018 intergenic MED16 +,CG11170 -,CG11275 + chr2R_7_22180001 chr2R_22180001 D4-c1 1015 chr2R 22205868 22205881 chr2R 22205961 22205974 10 93 4.0 3.0 3.5 2.2 106 chr2R 22205868 intergenic CG3290 -,CG3292 - chr2R 22205921 intergenic CG3290 -,CG3292 - chr2R 22205974 intergenic CG3290 -,CG3292 - chr2R_10_22205001 chr2R_22205001 D4-c1 1016 chr2R 22248840 22248873 chr2R 22248918 22248951 19 78 4.0 7.5 5.8 2.8 111 chr2R 22248840 intron dve + chr2R 22248896 intron dve + chr2R 22248951 intron dve + chr2R_19_22245001 chr2R_22245001 D4-c1 1017 chr2R 22297704 22297735 chr2R 22297781 22297812 12 77 0.0 2.0 1.0 6.0 108 chr2R 22297704 intergenic not near genes chr2R 22297758 intergenic wdp - chr2R 22297812 intergenic wdp - chr2R_12_22295001 chr2R_22295001 D4-c1 1018 chr2R 22349691 22349720 chr2R 22351476 22351505 jockey 12 1785 8.0 5.0 6.5 1.6 1814 chr2R 22349691 intron Liprin-gamma - chr2R 22350598 intron Liprin-gamma - chr2R 22351505 intron Liprin-gamma - chr2R_12_22350001 chr2R_22350001 D4-c1 1019 chr2R 22360379 22360398 chr2R 22360813 22360814 jockey 13 433 5.5 4.0 4.8 2.2 435 chr2R 22360379 intron Liprin-gamma - chr2R 22360596 intron Liprin-gamma - chr2R 22360814 intron Liprin-gamma - chr2R_13_22360001 chr2R_22360001 D4-c1 1020 chr2R 22377805 22377842 chr2R 22377892 22377927 12 85 3.5 4.0 3.8 2.5 122 chr2R 22377805 3` UTR Rtf1 + chr2R 22377866 3` UTR Rtf1 + chr2R 22377927 3` UTR Rtf1 + chr2R_12_22375001 chr2R_22375001 D4-c1 1021 chr2R 22453212 22453221 chr2R 22453316 22453325 5 104 0.0 6.0 3.0 1.2 113 chr2R 22453212 intergenic not near genes chr2R 22453268 intergenic not near genes chr2R 22453325 intergenic not near genes chr2R_5_22450001 chr2R_22450001 D4-c1 1022 chr2R 22460385 22460404 chr2R 22460465 22460484 10 80 4.5 5.0 4.8 1.7 99 chr2R 22460385 intron CG10384 + chr2R 22460434 intron CG10384 + chr2R 22460484 intron CG10384 + chr2R_10_22460001 chr2R_22460001 D4-c1 1023 chr2R 22477575 22477601 chr2R 22477681 22477707 19 106 8.0 6.0 7.0 2.4 132 chr2R 22477575 intergenic CG45063 - chr2R 22477641 intergenic CG45063 - chr2R 22477707 intergenic CG45063 - chr2R_19_22475001 chr2R_22475001 D4-c1 1024 chr2R 22503866 22503882 chr2R 22503962 22503978 7 96 0.0 2.5 1.2 3.2 112 chr2R 22503866 intron px - chr2R 22503922 intron px - chr2R 22503978 intron px - chr2R_7_22500001 chr2R_22500001 D4-c1 1025 chr2R 22525743 22525785 chr2R 22529299 22529341 jockey 16 3556 4.5 2.0 3.2 3.8 3598 chr2R 22525743 intron px - chr2R 22527542 intron px - chr2R 22529341 intron px - chr2R_16_22525001 chr2R_22525001 D4-c1 1026 chr2R 22575659 22575695 chr2R 22575738 22575775 10 78 1.0 2.5 1.8 3.6 116 chr2R 22575659 intron dnr1 - chr2R 22575717 intron dnr1 - chr2R 22575775 intron dnr1 - chr2R_10_22575001 chr2R_22575001 D4-c1 1027 chr2R 22580436 22580445 chr2R 22586581 22586590 diver 4 6145 4.5 4.0 4.2 0.8 6154 chr2R 22580436 intron dnr1 - chr2R 22583513 intron dnr1 - chr2R 22586590 intron dnr1 - chr2R_4_22580001 chr2R_22580001 D4-c1 1028 chr2R 22588148 22588158 chr2R 22588244 22588254 6 96 7.0 8.5 7.8 0.7 106 chr2R 22588148 intron dnr1 - chr2R 22588201 intron dnr1 - chr2R 22588254 intron dnr1 - chr2R_6_22585001 chr2R_22585001 D4-c1 1029 chr2R 22594741 22594751 chr2R 22650680 22650690 4 55939 9.0 12.0 10.5 0.3 55949 chr2R 22594741 5` UTR CG3927 + chr2R 22622716 intron CG33143 + chr2R 22650690 exon nsr + chr2R_4_22620001 chr2R_22620001 D4-c1 1030 chr2R 22596207 22596242 chr2R 22596287 22596322 15 80 5.5 2.5 4.0 3.0 115 chr2R 22596207 3` UTR CG3927 + chr2R 22596264 3` UTR CG3927 + chr2R 22596322 3` UTR CG3927 + chr2R_15_22595001 chr2R_22595001 D4-c1 1031 chr2R 22624775 22624812 chr2R 22627592 22627629 28 2818 29.0 31.5 30.2 0.9 2854 chr2R 22624775 intron CG33143 + chr2R 22626202 intron CG33143 + chr2R 22627629 intron CG33143 + chr2R_28_22625001 chr2R_22625001 D4-c1 1032 chr2R 22756567 22756627 chr2R 22756645 22756712 4 82 13.0 14.5 13.8 0.3 145 chr2R 22756567 intron,intron CG42260 -,CR30267 + chr2R 22756640 intron,intron CG42260 -,CR30267 + chr2R 22756712 intron,intron CG42260 -,CR30267 + chr2R_4_22755001 chr2R_22755001 D4-c1 1033 chr2R 22774960 22775002 chr2R 22775380 22775422 jockey 28 420 3.5 4.5 4.0 5.6 462 chr2R 22774960 intron CG42260 - chr2R 22775191 intron CG42260 - chr2R 22775422 intron CG42260 - chr2R_28_22775001 chr2R_22775001 D4-c1 1034 chr2R 22785730 22785760 chr2R 22785809 22785839 6 79 1.5 1.5 1.5 2.4 109 chr2R 22785730 intron CG42260 - chr2R 22785784 intron CG42260 - chr2R 22785839 intron CG42260 - chr2R_6_22785001 chr2R_22785001 D4-c1 1035 chr2R 22907403 22907435 chr2R 22907497 22907529 15 92 4.0 6.0 5.0 2.5 126 chr2R 22907403 intron nahoda + chr2R 22907466 intron nahoda + chr2R 22907529 intron nahoda + chr2R_15_22905001 chr2R_22905001 D4-c1 1036 chr2R 22945053 22945084 chr2R 22945168 22945199 16 115 8.5 5.5 7.0 2.0 146 chr2R 22945053 exon CG42694 + chr2R 22945126 3` UTR CG42694 + chr2R 22945199 intergenic CG42694 + chr2R_16_22945001 chr2R_22945001 D4-c1 1037 chr2R 22978288 22978315 chr2R 22978367 22978395 8 80 4.5 6.0 5.2 1.3 107 chr2R 22978288 intergenic not near genes chr2R 22978342 intergenic not near genes chr2R 22978395 intergenic not near genes chr2R_8_22975001 chr2R_22975001 D4-c1 1038 chr2R 23029611 23029634 chr2R 23029689 23029712 13 78 6.5 7.5 7.0 1.6 101 chr2R 23029611 intron,intron twi +,CG42741 - chr2R 23029662 intron,intron twi +,CG42741 - chr2R 23029712 intron,intron twi +,CG42741 - chr2R_13_23025001 chr2R_23025001 D4-c1 1039 chr2R 23084056 23084080 chr2R 23086888 23086912 7 2832 21.0 17.5 19.2 0.3 2856 chr2R 23084056 intergenic not near genes chr2R 23085484 intergenic CG9877 - chr2R 23086912 intergenic CG13538 + chr2R_7_23085001 chr2R_23085001 D4-c1 1040 chr2R 23084020 23084041 chr2R 23087270 23087291 9 3250 14.5 26.0 20.2 0.4 3271 chr2R 23084020 intergenic not near genes chr2R 23085656 intergenic CG9877 - chr2R 23087291 exon CG13538 + chr2R_9_23085001 chr2R_23085001 D4-c1 1041 chr2R 23158345 23158356 chr2R 23158423 23158434 5 78 4.5 8.0 6.2 0.7 89 chr2R 23158345 intron CG9899 + chr2R 23158390 intron CG9899 + chr2R 23158434 intron CG9899 + chr2R_5_23155001 chr2R_23155001 D4-c1 1042 chr2R 23179704 23179729 chr2R 23179871 23179896 8 166 4.5 5.5 5.0 1.3 192 chr2R 23179704 intron CG34371 - chr2R 23179800 intron CG34371 - chr2R 23179896 intron CG34371 - chr2R_8_23175001 chr2R_23175001 D4-c1 1043 chr2R 23186572 23186595 chr2R 23186651 23186674 8 79 4.5 4.0 4.2 1.5 102 chr2R 23186572 intron CG34371 - chr2R 23186623 intron CG34371 - chr2R 23186674 intron CG34371 - chr2R_8_23185001 chr2R_23185001 D4-c1 1044 chr2R 23188553 23188590 chr2R 23188632 23188669 16 79 2.0 4.5 3.2 3.8 116 chr2R 23188553 intron CG34371 - chr2R 23188611 intron CG34371 - chr2R 23188669 intron CG34371 - chr2R_16_23185001 chr2R_23185001 D4-c1 1045 chr2R 23254620 23254652 chr2R 23254701 23254733 16 80 4.0 9.0 6.5 2.1 113 chr2R 23254620 intergenic not near genes chr2R 23254676 intergenic not near genes chr2R 23254733 intergenic not near genes chr2R_16_23250001 chr2R_23250001 D4-c1 1046 chr2R 23304275 23304293 chr2R 23304643 23304660 8 368 6.0 0.0 3.0 2.0 385 chr2R 23304275 intergenic not near genes chr2R 23304468 intergenic not near genes chr2R 23304660 intergenic not near genes chr2R_8_23300001 chr2R_23300001 D4-c1 1047 chr2R 23463385 23463412 chr2R 23463465 23463492 11 80 4.5 4.5 4.5 2.0 107 chr2R 23463385 intron CG43795 + chr2R 23463438 intron CG43795 + chr2R 23463492 intron CG43795 + chr2R_11_23460001 chr2R_23460001 D4-c1 1048 chr2R 23467580 23467586 chr2R 23467708 23467717 4 130 5.5 5.5 5.5 0.6 137 chr2R 23467580 intron CG43795 + chr2R 23467648 intron CG43795 + chr2R 23467717 intron CG43795 + chr2R_4_23465001 chr2R_23465001 D4-c1 1049 chr2R 23482543 23482551 chr2R 23482622 23482630 5 79 5.0 0.0 2.5 1.4 87 chr2R 23482543 intron CG43795 + chr2R 23482586 intron CG43795 + chr2R 23482630 intron CG43795 + chr2R_5_23480001 chr2R_23480001 D4-c1 1050 chr2R 23496737 23496766 chr2R 23497073 23497102 9 336 17.0 17.0 17.0 0.5 365 chr2R 23496737 intergenic not near genes chr2R 23496920 intergenic not near genes chr2R 23497102 intergenic not near genes chr2R_9_23495001 chr2R_23495001 D4-c1 1051 chr2R 23508917 23508931 chr2R 23509035 23509049 8 118 17.0 10.0 13.5 0.6 132 chr2R 23508917 intergenic not near genes chr2R 23508983 intergenic not near genes chr2R 23509049 intergenic not near genes chr2R_8_23505001 chr2R_23505001 D4-c1 1052 chr2R 23529583 23529606 chr2R 23537152 23537183 412 14 7572 5.0 9.5 7.2 1.7 7600 chr2R 23529583 intron bw - chr2R 23533383 intron bw - chr2R 23537183 exon bw - chr2R_14_23530001 chr2R_23530001 D4-c1 1053 chr2R 23563890 23563920 chr2R 23563971 23564001 12 81 12.5 12.0 12.2 0.9 111 chr2R 23563890 3` UTR Pi3K59F + chr2R 23563946 3` UTR Pi3K59F + chr2R 23564001 3` UTR,5` UTR Pi3K59F +,CG30184 + chr2R_12_23560001 chr2R_23560001 D4-c1 1054 chr2R 23589179 23589193 chr2R 23589257 23589271 5 78 20.0 20.0 20.0 0.2 92 chr2R 23589179 intron apt + chr2R 23589225 intron apt + chr2R 23589271 intron apt + chr2R_5_23585001 chr2R_23585001 D4-c1 1055 chr2R 23607039 23607193 chr2R 23607121 23607287 25 87 3.0 6.5 4.8 4.3 248 chr2R 23607039 intron CG17664 - chr2R 23607163 intron CG17664 - chr2R 23607287 intron CG17664 - chr2R_25_23605001 chr2R_23605001 D4-c1 1056 chr2R 23705630 23705655 chr2R 23710907 23710932 10 5279 38.0 35.5 36.8 0.3 5302 chr2R 23705630 exon l(2)not - chr2R 23708281 intron,exon l(2)not -,l(2)tid + chr2R 23710932 intergenic not near genes chr2R_10_23705001 chr2R_23705001 D4-c1 1057 chr2R 23744770 23744794 chr2R 23744850 23744874 11 80 4.5 8.0 6.2 1.5 104 chr2R 23744770 intron egl - chr2R 23744822 intron egl - chr2R 23744874 intron egl - chr2R_11_23740001 chr2R_23740001 D4-c1 1058 chr2R 23784472 23784504 chr2R 23784551 23784583 12 79 1.0 1.5 1.2 5.5 111 chr2R 23784472 intron CG9850 - chr2R 23784528 intron CG9850 - chr2R 23784583 intron CG9850 - chr2R_12_23780001 chr2R_23780001 D4-c1 1059 chr2R 23914299 23914331 chr2R 23921924 23921956 412 15 7625 3.0 9.0 6.0 2.1 7657 chr2R 23914299 exon kcc + chr2R 23918128 intron kcc + chr2R 23921956 intron kcc + chr2R_15_23915001 chr2R_23915001 D4-c1 1060 chr2R 23986514 23986549 chr2R 23986594 23986630 13 81 14.0 13.0 13.5 0.9 116 chr2R 23986514 intron Phm - chr2R 23986572 intron Phm - chr2R 23986630 intron,5` UTR Phm -,CG30178 + chr2R_13_23985001 chr2R_23985001 D4-c1 1061 chr2R 24008410 24008433 chr2R 24008497 24008520 8 87 14.0 14.0 14.0 0.5 110 chr2R 24008410 intron Unc-89 - chr2R 24008465 intron Unc-89 - chr2R 24008520 intron Unc-89 - chr2R_8_24005001 chr2R_24005001 D4-c1 1062 chr2R 24031378 24031412 chr2R 24031463 24031497 9 85 18.0 16.0 17.0 0.5 119 chr2R 24031378 5` UTR CG30172 - chr2R 24031438 intergenic CG30172 -,Chi - chr2R 24031497 intergenic Chi -,CG30172 - chr2R_9_24030001 chr2R_24030001 D4-c1 1063 chr2R 24107428 24107445 chr2R 24107510 24107527 5 82 11.0 14.5 12.8 0.4 99 chr2R 24107428 3` UTR CG4049 - chr2R 24107478 3` UTR CG4049 - chr2R 24107527 3` UTR CG4049 - chr2R_5_24105001 chr2R_24105001 D4-c1 1064 chr2R 24147065 24147098 chr2R 24154644 24154677 412 14 7578 5.0 5.5 5.2 2.3 7612 chr2R 24147065 intron Dat + chr2R 24150871 intron Dat + chr2R 24154677 intron Dat + chr2R_14_24150001 chr2R_24150001 D4-c1 1065 chr2R 24174101 24174114 chr2R 24186867 24186880 412 6 12766 21.0 20.0 20.5 0.3 12779 chr2R 24174101 exon mRpS17 - chr2R 24180490 intron Nop60B + chr2R 24186880 intron ocm + chr2R_6_24180001 chr2R_24180001 D4-c1 1066 chr2R 24177240 24177261 chr2R 24184726 24184747 412 6 7486 2.5 2.5 2.5 1.7 7507 chr2R 24177240 3` UTR Nop60B + chr2R 24180994 intron Nop60B + chr2R 24184747 3` UTR Nop60B + chr2R_6_24180001 chr2R_24180001 D4-c1 1067 chr2R 24283653 24283665 chr2R 24283795 24283807 4 142 10.0 15.0 12.5 0.3 154 chr2R 24283653 intron nvy + chr2R 24283730 intron nvy + chr2R 24283807 intron nvy + chr2R_4_24280001 chr2R_24280001 D4-c1 1068 chr2R 24303523 24303534 chr2R 24303603 24303614 6 80 7.5 10.0 8.8 0.6 91 chr2R 24303523 intergenic not near genes chr2R 24303568 intergenic not near genes chr2R 24303614 intergenic not near genes chr2R_6_24300001 chr2R_24300001 D4-c1 1069 chr2R 24320199 24320205 chr2R 24320277 24320283 5 78 1.0 15.0 8.0 0.6 84 chr2R 24320199 intergenic not near genes chr2R 24320241 intergenic not near genes chr2R 24320283 intergenic not near genes chr2R_5_24320001 chr2R_24320001 D4-c1 1070 chr2R 24353425 24353454 chr2R 24361788 24361817 roo 6 8363 5.5 0.0 2.8 1.6 8392 chr2R 24353425 intron,intron bs +,CR44811 - chr2R 24357621 intron,intron bs +,CR44811 - chr2R 24361817 intron,intron bs +,CR44811 - chr2R_6_24355001 chr2R_24355001 D4-c1 1071 chr2R 24430921 24431095 chr2R 24431010 24431172 20 83 18.0 7.0 12.5 1.5 251 chr2R 24430921 intergenic CG15873 -,Pgam5-2 - chr2R 24431046 intergenic Pgam5-2 -,CG15873 - chr2R 24431172 intergenic Pgam5-2 -,CG15873 - chr2R_20_24430001 chr2R_24430001 D4-c1 1072 chr2R 24432760 24432786 chr2R 24433267 24433293 8 507 13.5 12.0 12.8 0.6 533 chr2R 24432760 intergenic Pgam5-2 - chr2R 24433026 intergenic Pgam5-2 - chr2R 24433293 intergenic not near genes chr2R_8_24430001 chr2R_24430001 D4-c1 1073 chr2R 24448386 24448406 chr2R 24448629 24448649 7 243 17.5 18.5 18.0 0.4 263 chr2R 24448386 intergenic not near genes chr2R 24448518 intergenic not near genes chr2R 24448649 intergenic not near genes chr2R_7_24445001 chr2R_24445001 D4-c1 1074 chr2R 24493085 24493089 chr2R 24493175 24493179 4 90 3.5 5.5 4.5 0.7 94 chr2R 24493085 intergenic CG13590 -,CG13589 - chr2R 24493132 intergenic CG13590 -,CG13589 - chr2R 24493179 intergenic CG13590 -,CG13589 - chr2R_4_24490001 chr2R_24490001 D4-c1 1075 chr2R 24509309 24509331 chr2R 24509395 24509417 6 86 13.0 11.0 12.0 0.5 108 chr2R 24509309 intergenic Letm1 - chr2R 24509363 intergenic Letm1 - chr2R 24509417 intergenic Letm1 - chr2R_6_24505001 chr2R_24505001 D4-c1 1076 chr2R 24590100 24590141 chr2R 24590209 24590234 9 97 3.0 5.5 4.2 1.7 134 chr2R 24590100 intron pio + chr2R 24590167 intron pio + chr2R 24590234 intron pio + chr2R_9_24590001 chr2R_24590001 D4-c1 1077 chr2R 24636922 24636930 chr2R 24637009 24637017 5 86 15.0 9.5 12.2 0.4 95 chr2R 24636922 intron CG13594 - chr2R 24636970 intron CG13594 - chr2R 24637017 intron CG13594 - chr2R_5_24635001 chr2R_24635001 D4-c1 1078 chr2R 24642386 24642399 chr2R 24642469 24642482 5 83 10.5 17.0 13.8 0.3 96 chr2R 24642386 intergenic CG4781 - chr2R 24642434 intergenic CG4781 - chr2R 24642482 intergenic CG4781 - chr2R_5_24640001 chr2R_24640001 D4-c1 1079 chr2R 24647594 24647618 chr2R 24655152 24655176 412 7 7558 2.5 7.5 5.0 1.2 7582 chr2R 24647594 intergenic not near genes chr2R 24651385 intergenic not near genes chr2R 24655176 intergenic not near genes chr2R_7_24650001 chr2R_24650001 D4-c1 1080 chr2R 24719804 24719826 chr2R 24719906 24719939 11 111 20.5 21.5 21.0 0.5 135 chr2R 24719804 intron Mid1 - chr2R 24719872 intron Mid1 - chr2R 24719939 intron Mid1 - chr2R_11_24715001 chr2R_24715001 D4-c1 1081 chr2R 24727883 24727917 chr2R 24735392 24735426 mdg1 20 7506 3.0 6.5 4.8 3.4 7543 chr2R 24727883 intron Mid1 - chr2R 24731654 intron Mid1 - chr2R 24735426 intron Mid1 - chr2R_20_24730001 chr2R_24730001 D4-c1 1082 chr2R 24751665 24751702 chr2R 24751744 24751781 17 79 10.0 11.0 10.5 1.5 116 chr2R 24751665 intron CG30421 + chr2R 24751723 intron CG30421 + chr2R 24751781 intron CG30421 + chr2R_17_24750001 chr2R_24750001 D4-c1 1083 chr2R 24763611 24763642 chr2R 24765588 24765619 G2 22 1977 9.0 7.0 8.0 2.4 2008 chr2R 24763611 exon CG3894 + chr2R 24764615 intron CG3894 + chr2R 24765619 exon CG3894 + chr2R_22_24760001 chr2R_24760001 D4-c1 1084 chr2R 24859839 24859871 chr2R 24859925 24859958 12 87 3.0 3.0 3.0 3.0 119 chr2R 24859839 5` UTR CR44829 + chr2R 24859898 5` UTR CR44829 + chr2R 24859958 5` UTR CR44829 + chr2R_12_24855001 chr2R_24855001 D4-c1 1085 chr2R 24884051 24884079 chr2R 24884134 24884162 9 83 4.5 3.0 3.8 1.9 111 chr2R 24884051 intron NKAIN + chr2R 24884106 intron NKAIN + chr2R 24884162 intron NKAIN + chr2R_9_24880001 chr2R_24880001 D4-c1 1086 chr2R 24953281 24953309 chr2R 24953365 24953393 7 84 11.5 15.0 13.2 0.5 112 chr2R 24953281 3` UTR CG12851 + chr2R 24953337 3` UTR CG12851 + chr2R 24953393 3` UTR CG12851 + chr2R_7_24950001 chr2R_24950001 D4-c1 1087 chr2R 24956262 24956293 chr2R 24956339 24956349 4 72 21.0 17.5 19.2 0.2 87 chr2R 24956262 3` UTR CR44830 - chr2R 24956306 3` UTR CR44830 - chr2R 24956349 3` UTR CR44830 - chr2R_4_24955001 chr2R_24955001 D4-c1 1088 chr2R 25004908 25004923 chr2R 25004981 25005002 4 78 18.0 15.0 16.5 0.2 94 chr2R 25004908 intron zip - chr2R 25004955 intron zip - chr2R 25005002 intron zip - chr2R_4_25000001 chr2R_25000001 D4-c1 1089 chr2R 25014545 25014571 chr2R 25014622 25014648 6 76 15.5 18.0 16.8 0.3 103 chr2R 25014545 intron uzip + chr2R 25014596 intron uzip + chr2R 25014648 intron uzip + chr2R_6_25010001 chr2R_25010001 D4-c1 1090 chr2R 25022638 25022671 chr2R 25022723 25022756 7 85 18.0 11.0 14.5 0.5 118 chr2R 25022638 intron uzip + chr2R 25022697 intron uzip + chr2R 25022756 intron uzip + chr2R_7_25020001 chr2R_25020001 D4-c1 1091 chr2R 25101283 25101309 chr2R 25101386 25101412 6 103 7.5 8.5 8.0 0.7 129 chr2R 25101283 intron lov - chr2R 25101348 intron lov - chr2R 25101412 intron lov - chr2R_6_25100001 chr2R_25100001 D4-c1 1092 chr2R 25124456 25124485 chr2R 25124548 25124577 8 92 8.5 10.0 9.2 0.8 121 chr2R 25124456 intron lov - chr2R 25124516 intron lov - chr2R 25124577 intron lov - chr2R_8_25120001 chr2R_25120001 D4-c1 1093 chr2R 25141648 25141681 chr2R 25159339 25159372 roo 12 17691 2.5 2.0 2.2 3.8 17724 chr2R 25141648 intergenic not near genes chr2R 25150510 intergenic not near genes chr2R 25159372 intergenic not near genes chr2R_12_25150001 chr2R_25150001 D4-c1 1094 chr2R 25180765 25180787 chr2R 25180843 25180865 5 78 8.5 9.5 9.0 0.5 100 chr2R 25180765 intergenic not near genes chr2R 25180815 intergenic not near genes chr2R 25180865 intergenic not near genes chr2R_5_25180001 chr2R_25180001 D4-c1 1095 chr2R 25202251 25202279 chr2R 25202359 25202387 5 108 11.0 10.5 10.8 0.4 136 chr2R 25202251 intron CG9380 - chr2R 25202319 intron CG9380 - chr2R 25202387 intron CG9380 - chr2R_5_25200001 chr2R_25200001 D4-c1 1096 chr2R 25253443 25253472 chr2R 25253520 25253549 7 77 1.0 1.5 1.2 3.2 106 chr2R 25253443 intron,intron CG9380 -,CG30428 + chr2R 25253496 intron,intron CG9380 -,CG30428 + chr2R 25253549 intron,intron CG9380 -,CG30428 + chr2R_7_25250001 chr2R_25250001 D4-c1 1097 chr3L 402687 402714 chr3L 409741 409767 297 14 7054 9.5 4.5 7.0 1.8 7080 chr3L 402687 intergenic not near genes chr3L 406227 intergenic not near genes chr3L 409767 intergenic not near genes chr3L_14_405001 chr3L_405001 D4-c1 1098 chr3L 463109 463140 chr3L 463191 463222 13 80 6.5 9.0 7.8 1.5 113 chr3L 463109 intron klar - chr3L 463166 intron klar - chr3L 463222 intron klar - chr3L_13_460001 chr3L_460001 D4-c1 1099 chr3L 470919 470950 chr3L 471147 471178 16 227 4.0 7.5 5.8 2.4 259 chr3L 470919 intron klar - chr3L 471048 intron klar - chr3L 471178 intron klar - chr3L_16_470001 chr3L_470001 D4-c1 1100 chr3L 491638 491665 chr3L 491721 491748 9 83 6.5 2.5 4.5 1.6 110 chr3L 491638 intron klar - chr3L 491693 intron klar - chr3L 491748 intron klar - chr3L_9_490001 chr3L_490001 D4-c1 1101 chr3L 494587 494623 chr3L 494669 494706 14 83 5.0 0.0 2.5 4.0 119 chr3L 494587 intron klar - chr3L 494646 intron klar - chr3L 494706 intron klar - chr3L_14_490001 chr3L_490001 D4-c1 1102 chr3L 642465 642498 chr3L 642557 642590 14 92 5.0 5.0 5.0 2.3 125 chr3L 642465 5` UTR CR43334 + chr3L 642528 5` UTR CR43334 + chr3L 642590 5` UTR CR43334 + chr3L_14_640001 chr3L_640001 D4-c1 1103 chr3L 665863 665884 chr3L 665947 665968 8 84 5.0 2.0 3.5 1.8 105 chr3L 665863 intergenic not near genes chr3L 665916 intergenic not near genes chr3L 665968 intergenic not near genes chr3L_8_665001 chr3L_665001 D4-c1 1104 chr3L 668814 668847 chr3L 668921 668954 27 106 7.0 6.0 6.5 3.6 140 chr3L 668814 intergenic not near genes chr3L 668884 intergenic not near genes chr3L 668954 intergenic not near genes chr3L_27_665001 chr3L_665001 D4-c1 1105 chr3L 705245 705259 chr3L 705322 705336 7 77 8.5 4.0 6.2 1.0 91 chr3L 705245 intergenic CR44514 + chr3L 705290 intergenic CR44514 + chr3L 705336 5` UTR CR44514 + chr3L_7_705001 chr3L_705001 D4-c1 1106 chr3L 705901 705913 chr3L 705998 706010 6 97 6.0 9.0 7.5 0.7 109 chr3L 705901 intergenic CG13895 -,CR44514 + chr3L 705956 3` UTR CG13895 - chr3L 706010 3` UTR CG13895 - chr3L_6_705001 chr3L_705001 D4-c1 1107 chr3L 717911 717914 chr3L 717985 718004 4 84 0.0 7.5 3.8 0.8 93 chr3L 717911 intergenic not near genes chr3L 717958 intergenic not near genes chr3L 718004 intergenic not near genes chr3L_4_715001 chr3L_715001 D4-c1 1108 chr3L 789919 789924 chr3L 790398 790403 roo 4 479 3.0 0.0 1.5 1.6 484 chr3L 789919 intergenic not near genes chr3L 790161 intergenic not near genes chr3L 790403 intergenic not near genes chr3L_4_790001 chr3L_790001 D4-c1 1109 chr3L 827527 827555 chr3L 827604 827632 13 77 3.0 2.0 2.5 3.7 105 chr3L 827527 intron,intron CG13900 -,CR45184 - chr3L 827580 intron,intron,3` UTR CG13900 -,CR45184 -,snoRNA:Me28S-G3113b - chr3L 827632 intron,intron CG13900 -,CR45184 - chr3L_13_825001 chr3L_825001 D4-c1 1110 chr3L 857997 858030 chr3L 866479 866505 Tirant 12 8480 4.5 5.5 5.0 2.0 8508 chr3L 857997 intergenic not near genes chr3L 862251 intergenic not near genes chr3L 866505 5` UTR CG12502 + chr3L_12_860001 chr3L_860001 D4-c1 1111 chr3L 893571 893594 chr3L 893686 893709 7 115 4.0 1.5 2.8 1.8 138 chr3L 893571 3` UTR CG32479 + chr3L 893640 3` UTR CG32479 + chr3L 893709 3` UTR CG32479 + chr3L_7_890001 chr3L_890001 D4-c1 1112 chr3L 895830 895859 chr3L 895912 895941 8 82 0.0 3.0 1.5 3.2 111 chr3L 895830 intergenic CG34056 + chr3L 895886 intergenic CG34056 + chr3L 895941 intergenic CG34056 + chr3L_8_895001 chr3L_895001 D4-c1 1113 chr3L 925174 925208 chr3L 932600 932635 mdg1 10 7427 5.0 3.0 4.0 2.0 7461 chr3L 925174 intron Glut1 + chr3L 928904 intron Glut1 + chr3L 932635 intron Glut1 + chr3L_10_925001 chr3L_925001 D4-c1 1114 chr3L 935520 935536 chr3L 935660 935665 9 138 7.5 6.0 6.8 1.2 145 chr3L 935520 intron Glut1 + chr3L 935592 intron Glut1 + chr3L 935665 intron Glut1 + chr3L_9_935001 chr3L_935001 D4-c1 1115 chr3L 935539 935549 chr3L 935658 935689 7 137 4.0 6.0 5.0 1.2 150 chr3L 935539 intron Glut1 + chr3L 935614 intron Glut1 + chr3L 935689 intron Glut1 + chr3L_7_935001 chr3L_935001 D4-c1 1116 chr3L 939772 939801 chr3L 940894 940923 jockey 16 1122 3.5 6.0 4.8 2.8 1151 chr3L 939772 intron Glut1 + chr3L 940348 intron Glut1 + chr3L 940923 intron Glut1 + chr3L_16_940001 chr3L_940001 D4-c1 1117 chr3L 954863 954895 chr3L 955141 955173 10 278 3.0 4.0 3.5 2.2 310 chr3L 954863 intron Glut1 + chr3L 955018 intron Glut1 + chr3L 955173 intron Glut1 + chr3L_10_955001 chr3L_955001 D4-c1 1118 chr3L 958312 958344 chr3L 958397 958429 14 85 8.5 3.5 6.0 2.0 117 chr3L 958312 intron Glut1 + chr3L 958370 intron Glut1 + chr3L 958429 intron Glut1 + chr3L_14_955001 chr3L_955001 D4-c1 1119 chr3L 961016 961043 chr3L 961110 961137 14 94 4.5 2.5 3.5 3.1 121 chr3L 961016 intron Glut1 + chr3L 961076 intron Glut1 + chr3L 961137 intron Glut1 + chr3L_14_960001 chr3L_960001 D4-c1 1120 chr3L 1031577 1031614 chr3L 1031654 1031691 16 77 1.0 3.5 2.2 5.0 114 chr3L 1031577 intron trio - chr3L 1031634 intron trio - chr3L 1031691 intron trio - chr3L_16_1030001 chr3L_1030001 D4-c1 1121 chr3L 1040549 1040580 chr3L 1040634 1040665 10 85 5.0 5.0 5.0 1.7 116 chr3L 1040549 intron bab1 - chr3L 1040607 intron bab1 - chr3L 1040665 intron bab1 - chr3L_10_1040001 chr3L_1040001 D4-c1 1122 chr3L 1047358 1047379 chr3L 1055164 1055192 412 5 7811 3.0 3.5 3.2 1.2 7834 chr3L 1047358 intron bab1 - chr3L 1051275 intron bab1 - chr3L 1055192 intron bab1 - chr3L_5_1050001 chr3L_1050001 D4-c1 1123 chr3L 1047383 1047384 chr3L 1055163 1055186 412 4 7797 2.0 3.5 2.8 1.1 7803 chr3L 1047383 intron bab1 - chr3L 1051284 intron bab1 - chr3L 1055186 intron bab1 - chr3L_4_1050001 chr3L_1050001 D4-c1 1124 chr3L 1103990 1104013 chr3L 1104182 1104205 13 192 7.0 5.5 6.2 1.8 215 chr3L 1103990 intergenic not near genes chr3L 1104098 intergenic not near genes chr3L 1104205 intergenic not near genes chr3L_13_1100001 chr3L_1100001 D4-c1 1125 chr3L 1109633 1109662 chr3L 1109722 1109751 11 87 6.0 5.5 5.8 1.6 118 chr3L 1109633 intergenic not near genes chr3L 1109692 intergenic not near genes chr3L 1109751 intergenic not near genes chr3L_11_1105001 chr3L_1105001 D4-c1 1126 chr3L 1145239 1145266 chr3L 1145319 1145346 14 80 3.5 0.0 1.8 5.0 107 chr3L 1145239 intron bab2 - chr3L 1145292 intron bab2 - chr3L 1145346 intron bab2 - chr3L_14_1145001 chr3L_1145001 D4-c1 1127 chr3L 1154131 1154162 chr3L 1163281 1163305 roo 13 9150 3.0 3.0 3.0 3.2 9174 chr3L 1154131 intron bab2 - chr3L 1158718 intron bab2 - chr3L 1163305 intron bab2 - chr3L_13_1155001 chr3L_1155001 D4-c1 1128 chr3L 1219597 1219625 chr3L 1227331 1227358 412 20 7734 3.0 8.0 5.5 3.1 7761 chr3L 1219597 intron mwh + chr3L 1223478 intron mwh + chr3L 1227358 intron mwh + chr3L_20_1220001 chr3L_1220001 D4-c1 1129 chr3L 1257631 1257656 chr3L 1257712 1257736 13 81 0.5 5.5 3.0 3.2 105 chr3L 1257631 intron CG9134 + chr3L 1257684 intron CG9134 + chr3L 1257736 intron CG9134 + chr3L_13_1255001 chr3L_1255001 D4-c1 1130 chr3L 1260148 1260161 chr3L 1260229 1260242 9 81 4.5 3.0 3.8 1.9 94 chr3L 1260148 intron CG9134 + chr3L 1260195 intron CG9134 + chr3L 1260242 intron CG9134 + chr3L_9_1260001 chr3L_1260001 D4-c1 1131 chr3L 1347155 1347193 chr3L 1347241 1347279 21 86 3.5 6.0 4.8 3.6 124 chr3L 1347155 intron Ptp61F - chr3L 1347217 intron Ptp61F - chr3L 1347279 intron Ptp61F - chr3L_21_1345001 chr3L_1345001 D4-c1 1132 chr3L 1357119 1357132 chr3L 1357199 1357212 9 80 7.5 2.0 4.8 1.6 93 chr3L 1357119 intron Ptp61F - chr3L 1357166 intron Ptp61F - chr3L 1357212 intron Ptp61F - chr3L_9_1355001 chr3L_1355001 D4-c1 1133 chr3L 1374434 1374445 chr3L 1374512 1374520 6 76 7.5 6.5 7.0 0.8 86 chr3L 1374434 intron,intron Ptp61F -,ru + chr3L 1374477 intron,intron Ptp61F -,ru + chr3L 1374520 intron,intron Ptp61F -,ru + chr3L_6_1370001 chr3L_1370001 D4-c1 1134 chr3L 1385173 1385209 chr3L 1385262 1385298 14 89 4.0 4.5 4.2 2.7 125 chr3L 1385173 intron,intron Ptp61F -,ru + chr3L 1385236 intron,intron Ptp61F -,ru + chr3L 1385298 intron,intron Ptp61F -,ru + chr3L_14_1385001 chr3L_1385001 D4-c1 1135 chr3L 1396737 1396759 chr3L 1396822 1396840 6 82 9.0 9.5 9.2 0.6 103 chr3L 1396737 intron Ptp61F - chr3L 1396788 intron Ptp61F - chr3L 1396840 intron Ptp61F - chr3L_6_1395001 chr3L_1395001 D4-c1 1136 chr3L 1505994 1506032 chr3L 1513592 1513630 17.6 19 7598 5.0 5.5 5.2 3.1 7636 chr3L 1505994 intron,intron Psa +,cue - chr3L 1509812 intron,intron Psa +,cue - chr3L 1513630 intron,intron Psa +,cue - chr3L_19_1505001 chr3L_1505001 D4-c1 1137 chr3L 1639217 1639242 chr3L 1639399 1639416 12 181 1.5 7.0 4.2 2.3 199 chr3L 1639217 5` UTR metl - chr3L 1639316 intergenic metl -,Bgb + chr3L 1639416 intergenic metl -,Bgb + chr3L_12_1635001 chr3L_1635001 D4-c1 1138 chr3L 1740853 1740886 chr3L 1741097 1741130 pogo 9 243 3.5 6.0 4.8 1.6 277 chr3L 1740853 intron Gk + chr3L 1740992 intron Gk + chr3L 1741130 intron Gk + chr3L_9_1740001 chr3L_1740001 D4-c1 1139 chr3L 1746601 1746603 chr3L 1746702 1746704 4 100 7.5 6.0 6.8 0.5 103 chr3L 1746601 intergenic CG13921 + chr3L 1746652 intergenic CG13921 + chr3L 1746704 intergenic CG13921 + chr3L_4_1745001 chr3L_1745001 D4-c1 1140 chr3L 1746606 1746620 chr3L 1746696 1746721 10 100 3.5 6.0 4.8 1.7 115 chr3L 1746606 intergenic CG13921 + chr3L 1746664 intergenic CG13921 + chr3L 1746721 intergenic CG13921 + chr3L_10_1745001 chr3L_1745001 D4-c1 1141 chr3L 1805696 1805711 chr3L 1805871 1805886 6 174 2.5 4.0 3.2 1.4 190 chr3L 1805696 exon CG42676 + chr3L 1805791 intron CG42676 + chr3L 1805886 intron CG42676 + chr3L_6_1805001 chr3L_1805001 D4-c1 1142 chr3L 1848641 1848671 chr3L 1848720 1848750 14 79 3.0 4.0 3.5 3.1 109 chr3L 1848641 intergenic not near genes chr3L 1848696 intergenic not near genes chr3L 1848750 intergenic not near genes chr3L_14_1845001 chr3L_1845001 D4-c1 1143 chr3L 1978700 1978723 chr3L 1978921 1978944 16 221 39.0 37.5 38.2 0.4 244 chr3L 1978700 intergenic not near genes chr3L 1978822 intergenic not near genes chr3L 1978944 intergenic not near genes chr3L_16_1975001 chr3L_1975001 D4-c1 1144 chr3L 2006465 2006501 chr3L 2006546 2006582 14 81 4.0 8.5 6.2 1.9 117 chr3L 2006465 intergenic not near genes chr3L 2006524 intergenic not near genes chr3L 2006582 intergenic not near genes chr3L_14_2005001 chr3L_2005001 D4-c1 1145 chr3L 2108260 2108279 chr3L 2113465 2113484 copia 7 5205 4.5 3.0 3.8 1.5 5224 chr3L 2108260 intron sls - chr3L 2110872 intron sls - chr3L 2113484 intron sls - chr3L_7_2110001 chr3L_2110001 D4-c1 1146 chr3L 2139205 2139234 chr3L 2139287 2139316 7 80 4.5 4.5 4.5 1.3 111 chr3L 2139205 intron zormin - chr3L 2139260 intron zormin - chr3L 2139316 intron zormin - chr3L_7_2135001 chr3L_2135001 D4-c1 1147 chr3L 2168769 2168808 chr3L 2168861 2168890 24 92 4.0 3.5 3.8 5.0 121 chr3L 2168769 exon CG15879 - chr3L 2168830 intron CG15879 - chr3L 2168890 intron CG15879 - chr3L_24_2165001 chr3L_2165001 D4-c1 1148 chr3L 2181174 2181201 chr3L 2181254 2181281 9 80 2.5 4.0 3.2 2.1 107 chr3L 2181174 intergenic not near genes chr3L 2181228 intergenic not near genes chr3L 2181281 intergenic not near genes chr3L_9_2180001 chr3L_2180001 D4-c1 1149 chr3L 2199810 2199821 chr3L 2199887 2199898 8 77 0.0 5.5 2.8 2.1 88 chr3L 2199810 intergenic not near genes chr3L 2199854 intergenic not near genes chr3L 2199898 intergenic not near genes chr3L_8_2195001 chr3L_2195001 D4-c1 1150 chr3L 2277977 2278011 chr3L 2278174 2278208 19 197 5.0 6.0 5.5 2.9 231 chr3L 2277977 3` UTR yellow-g2 + chr3L 2278092 intergenic yellow-g2 + chr3L 2278208 intergenic yellow-g2 + chr3L_19_2275001 chr3L_2275001 D4-c1 1151 chr3L 2308002 2308033 chr3L 2308109 2308140 11 106 3.0 5.0 4.0 2.2 138 chr3L 2308002 intergenic not near genes chr3L 2308071 intergenic not near genes chr3L 2308140 intergenic not near genes chr3L_11_2305001 chr3L_2305001 D4-c1 1152 chr3L 2310148 2310180 chr3L 2310892 2310907 15 742 5.5 4.0 4.8 2.6 759 chr3L 2310148 intergenic not near genes chr3L 2310528 intergenic not near genes chr3L 2310907 intergenic not near genes chr3L_15_2310001 chr3L_2310001 D4-c1 1153 chr3L 2316682 2316696 chr3L 2316768 2316782 5 86 9.0 3.5 6.2 0.7 100 chr3L 2316682 intergenic CR45427 - chr3L 2316732 intergenic CR45427 - chr3L 2316782 intergenic CR45427 - chr3L_5_2315001 chr3L_2315001 D4-c1 1154 chr3L 2331583 2331614 chr3L 2331661 2331692 8 77 2.5 5.0 3.8 1.7 109 chr3L 2331583 intron MsR1 + chr3L 2331638 intron MsR1 + chr3L 2331692 intron MsR1 + chr3L_8_2330001 chr3L_2330001 D4-c1 1155 chr3L 2356065 2356098 chr3L 2356154 2356187 19 89 4.0 1.5 2.8 5.0 122 chr3L 2356065 intergenic not near genes chr3L 2356126 intergenic not near genes chr3L 2356187 intergenic not near genes chr3L_19_2355001 chr3L_2355001 D4-c1 1156 chr3L 2429058 2429078 chr3L 2429152 2429164 5 92 6.0 6.0 6.0 0.7 106 chr3L 2429058 intron CG45186 + chr3L 2429111 intron CG45186 + chr3L 2429164 intron CG45186 + chr3L_5_2425001 chr3L_2425001 D4-c1 1157 chr3L 2433494 2433523 chr3L 2433578 2433607 7 84 3.0 4.5 3.8 1.5 113 chr3L 2433494 intron CG45186 + chr3L 2433550 intron CG45186 + chr3L 2433607 intron CG45186 + chr3L_7_2430001 chr3L_2430001 D4-c1 1158 chr3L 2447501 2447537 chr3L 2456658 2456694 roo 18 9157 3.0 4.0 3.5 4.0 9193 chr3L 2447501 intron CG45186 + chr3L 2452098 intron CG45186 + chr3L 2456694 intron CG45186 + chr3L_18_2450001 chr3L_2450001 D4-c1 1159 chr3L 2520647 2520679 chr3L 2520744 2520776 15 97 5.0 5.5 5.2 2.4 129 chr3L 2520647 intron Spn - chr3L 2520712 intron Spn - chr3L 2520776 intron Spn - chr3L_15_2520001 chr3L_2520001 D4-c1 1160 chr3L 2533650 2533681 chr3L 2533733 2533764 12 82 9.0 12.5 10.8 1.0 114 chr3L 2533650 intron Spn - chr3L 2533707 intron Spn - chr3L 2533764 intron Spn - chr3L_12_2530001 chr3L_2530001 D4-c1 1161 chr3L 2548253 2548288 chr3L 2548343 2548378 21 89 6.0 5.0 5.5 3.2 125 chr3L 2548253 intron Spn - chr3L 2548316 intron Spn - chr3L 2548378 intron Spn - chr3L_21_2545001 chr3L_2545001 D4-c1 1162 chr3L 2561525 2561561 chr3L 2561603 2561639 10 78 3.0 2.0 2.5 2.9 114 chr3L 2561525 intron msn - chr3L 2561582 intron msn - chr3L 2561639 intron msn - chr3L_10_2560001 chr3L_2560001 D4-c1 1163 chr3L 2626085 2626103 chr3L 2626187 2626204 5 100 7.0 4.0 5.5 0.8 119 chr3L 2626085 intron Pxn - chr3L 2626144 intron Pxn - chr3L 2626204 intron Pxn - chr3L_5_2625001 chr3L_2625001 D4-c1 1164 chr3L 2719537 2719557 chr3L 2719640 2719660 11 103 5.5 4.0 4.8 1.9 123 chr3L 2719537 3` UTR Mrtf - chr3L 2719598 3` UTR Mrtf - chr3L 2719660 3` UTR Mrtf - chr3L_11_2715001 chr3L_2715001 D4-c1 1165 chr3L 2751455 2751466 chr3L 2755751 2755762 F-element 5 4296 13.0 9.0 11.0 0.4 4307 chr3L 2751455 intron Mrtf - chr3L 2753608 intron Mrtf - chr3L 2755762 intron Mrtf - chr3L_5_2750001 chr3L_2750001 D4-c1 1166 chr3L 2766736 2766766 chr3L 2766834 2766864 12 98 3.0 2.5 2.8 3.2 128 chr3L 2766736 intergenic Mrtf -,Non2 + chr3L 2766800 intergenic Non2 +,Mrtf - chr3L 2766864 intergenic Non2 +,Mrtf - chr3L_12_2765001 chr3L_2765001 D4-c1 1167 chr3L 2795724 2795756 chr3L 2795848 2795874 5 123 3.0 6.5 4.8 0.9 150 chr3L 2795724 intron CG43444 - chr3L 2795799 intron CG43444 - chr3L 2795874 intron CG43444 - chr3L_5_2795001 chr3L_2795001 D4-c1 1168 chr3L 2882113 2882144 chr3L 2882190 2882221 14 77 5.0 4.5 4.8 2.4 108 chr3L 2882113 intergenic not near genes chr3L 2882167 intergenic not near genes chr3L 2882221 intergenic not near genes chr3L_14_2880001 chr3L_2880001 D4-c1 1169 chr3L 2927847 2927869 chr3L 2936120 2936147 Tirant 7 8277 1.5 2.0 1.8 2.5 8300 chr3L 2927847 intron Shab + chr3L 2931997 intron Shab + chr3L 2936147 intron Shab + chr3L_7_2930001 chr3L_2930001 D4-c1 1170 chr3L 2987731 2987753 chr3L 2987994 2988016 10 263 4.0 5.0 4.5 1.8 285 chr3L 2987731 intergenic not near genes chr3L 2987874 intergenic not near genes chr3L 2988016 intergenic not near genes chr3L_10_2985001 chr3L_2985001 D4-c1 1171 chr3L 3028339 3028373 chr3L 3028419 3028453 14 80 3.5 5.0 4.2 2.7 114 chr3L 3028339 intergenic not near genes chr3L 3028396 intergenic not near genes chr3L 3028453 intergenic not near genes chr3L_14_3025001 chr3L_3025001 D4-c1 1172 chr3L 3040325 3040346 chr3L 3042115 3042136 S-element 6 1790 4.5 2.0 3.2 1.4 1811 chr3L 3040325 3` UTR CG2162 + chr3L 3041230 intergenic not near genes chr3L 3042136 intergenic Jafrac2 + chr3L_6_3040001 chr3L_3040001 D4-c1 1173 chr3L 3051742 3051757 chr3L 3051985 3052000 pogo 8 243 7.5 3.0 5.2 1.3 258 chr3L 3051742 3` UTR CG32485 + chr3L 3051871 intergenic CG32485 + chr3L 3052000 intergenic CG32485 + chr3L_8_3050001 chr3L_3050001 D4-c1 1174 chr3L 3061285 3061312 chr3L 3069869 3069896 Tirant 11 8584 7.0 6.0 6.5 1.5 8611 chr3L 3061285 intron CG32486 - chr3L 3065590 intron CG32486 - chr3L 3069896 intron CG32486 - chr3L_11_3065001 chr3L_3065001 D4-c1 1175 chr3L 3252354 3252361 chr3L 3252431 3252438 5 77 1.5 0.0 0.8 2.8 84 chr3L 3252354 5` UTR CR43626 + chr3L 3252396 5` UTR CR43626 + chr3L 3252438 5` UTR CR43626 + chr3L_5_3250001 chr3L_3250001 D4-c1 1176 chr3L 3259823 3259832 chr3L 3259924 3259933 6 101 0.0 4.0 2.0 2.0 110 chr3L 3259823 intron ckd + chr3L 3259878 intron ckd + chr3L 3259933 intron ckd + chr3L_6_3255001 chr3L_3255001 D4-c1 1177 chr3L 3281437 3281474 chr3L 3281934 3281971 Doc 22 496 6.5 5.5 6.0 3.1 534 chr3L 3281437 intron CG12017 + chr3L 3281704 intron CG12017 + chr3L 3281971 intron CG12017 + chr3L_22_3280001 chr3L_3280001 D4-c1 1178 chr3L 3294134 3294147 chr3L 3294226 3294239 5 92 2.5 3.5 3.0 1.2 105 chr3L 3294134 intron CG12009 + chr3L 3294186 intron CG12009 + chr3L 3294239 intron CG12009 + chr3L_5_3290001 chr3L_3290001 D4-c1 1179 chr3L 3317532 3317566 chr3L 3317612 3317646 12 80 1.0 3.0 2.0 4.0 114 chr3L 3317532 intergenic Drsl5 +,PIG-C - chr3L 3317589 intergenic PIG-C -,Drsl5 + chr3L 3317646 intergenic PIG-C - chr3L_12_3315001 chr3L_3315001 D4-c1 1180 chr3L 3381028 3381058 chr3L 3381122 3381152 9 94 2.5 7.5 5.0 1.5 124 chr3L 3381028 intergenic not near genes chr3L 3381090 intergenic not near genes chr3L 3381152 intergenic not near genes chr3L_9_3380001 chr3L_3380001 D4-c1 1181 chr3L 3436296 3436315 chr3L 3436375 3436395 5 80 2.5 2.5 2.5 1.4 99 chr3L 3436296 intron eIF5B - chr3L 3436346 intron eIF5B - chr3L 3436395 intron eIF5B - chr3L_5_3435001 chr3L_3435001 D4-c1 1182 chr3L 3450604 3450626 chr3L 3450690 3450712 4 86 0.0 6.5 3.2 1.0 108 chr3L 3450604 intron eIF5B - chr3L 3450658 intron eIF5B - chr3L 3450712 intron eIF5B - chr3L_4_3450001 chr3L_3450001 D4-c1 1183 chr3L 3470157 3470188 chr3L 3470234 3470264 8 77 3.5 2.5 3.0 2.0 107 chr3L 3470157 intron CG14971 - chr3L 3470210 intron CG14971 - chr3L 3470264 intron CG14971 - chr3L_8_3470001 chr3L_3470001 D4-c1 1184 chr3L 3475072 3475112 chr3L 3475517 3475557 jockey 22 445 1.0 4.5 2.8 5.8 485 chr3L 3475072 intron CG42324 + chr3L 3475314 intron CG42324 + chr3L 3475557 intron CG42324 + chr3L_22_3475001 chr3L_3475001 D4-c1 1185 chr3L 3484412 3484445 chr3L 3484490 3484523 15 78 4.0 3.0 3.5 3.3 111 chr3L 3484412 intron,intron CG42324 +,CG43074 - chr3L 3484468 intron,exon CG42324 +,CG43074 - chr3L 3484523 intron,intron CG42324 +,CG43074 - chr3L_15_3480001 chr3L_3480001 D4-c1 1186 chr3L 3491626 3491657 chr3L 3491711 3491742 13 84 6.0 3.0 4.5 2.4 116 chr3L 3491626 intron CG42324 + chr3L 3491684 intron CG42324 + chr3L 3491742 intron CG42324 + chr3L_13_3490001 chr3L_3490001 D4-c1 1187 chr3L 3494196 3494205 chr3L 3494273 3494283 5 78 5.5 2.5 4.0 1.0 87 chr3L 3494196 intron CG42324 + chr3L 3494240 intron CG42324 + chr3L 3494283 intron CG42324 + chr3L_5_3490001 chr3L_3490001 D4-c1 1188 chr3L 3547064 3547087 chr3L 3547145 3547176 7 84 0.0 3.5 1.8 2.5 112 chr3L 3547064 intron Eip63E + chr3L 3547120 intron Eip63E + chr3L 3547176 intron Eip63E + chr3L_7_3545001 chr3L_3545001 D4-c1 1189 chr3L 3565943 3565972 chr3L 3566020 3566049 12 76 3.5 5.5 4.5 2.2 106 chr3L 3565943 intron Eip63E + chr3L 3565996 intron Eip63E + chr3L 3566049 intron Eip63E + chr3L_12_3565001 chr3L_3565001 D4-c1 1190 chr3L 3601296 3601330 chr3L 3606608 3606642 copia 17 5312 3.0 2.0 2.5 4.9 5346 chr3L 3601296 intron Eip63E + chr3L 3603969 intron Eip63E + chr3L 3606642 intron Eip63E + chr3L_17_3600001 chr3L_3600001 D4-c1 1191 chr3L 3627238 3627262 chr3L 3627344 3627368 9 106 3.0 5.5 4.2 1.7 130 chr3L 3627238 intron dar1 + chr3L 3627303 intron dar1 + chr3L 3627368 intron dar1 + chr3L_9_3625001 chr3L_3625001 D4-c1 1192 chr3L 3753260 3753296 chr3L 3753354 3753387 19 94 3.0 6.5 4.8 3.3 127 chr3L 3753260 intron CG32264 - chr3L 3753324 intron CG32264 - chr3L 3753387 intron CG32264 - chr3L_19_3750001 chr3L_3750001 D4-c1 1193 chr3L 3766736 3766756 chr3L 3766823 3766843 5 87 2.0 0.0 1.0 2.5 107 chr3L 3766736 intron CG32264 - chr3L 3766790 intron CG32264 - chr3L 3766843 intron CG32264 - chr3L_5_3765001 chr3L_3765001 D4-c1 1194 chr3L 3783273 3783287 chr3L 3783350 3783364 7 76 0.5 4.5 2.5 2.0 91 chr3L 3783273 intron CG32264 - chr3L 3783318 intron CG32264 - chr3L 3783364 intron CG32264 - chr3L_7_3780001 chr3L_3780001 D4-c1 1195 chr3L 3793031 3793059 chr3L 3793235 3793263 10 204 5.5 3.0 4.2 1.9 232 chr3L 3793031 intron CG32264 - chr3L 3793147 intron CG32264 - chr3L 3793263 intron CG32264 - chr3L_10_3790001 chr3L_3790001 D4-c1 1196 chr3L 3795590 3795624 chr3L 3795668 3795702 16 78 3.0 1.5 2.2 5.0 112 chr3L 3795590 intron CG32264 - chr3L 3795646 intron CG32264 - chr3L 3795702 intron CG32264 - chr3L_16_3795001 chr3L_3795001 D4-c1 1197 chr3L 3797239 3797262 chr3L 3797323 3797346 6 84 1.0 1.0 1.0 3.0 107 chr3L 3797239 intron CG32264 - chr3L 3797292 intron CG32264 - chr3L 3797346 intron CG32264 - chr3L_6_3795001 chr3L_3795001 D4-c1 1198 chr3L 3833737 3833770 chr3L 3833979 3834012 pogo 11 242 5.0 3.5 4.2 2.1 275 chr3L 3833737 intron enc + chr3L 3833874 intron enc + chr3L 3834012 intron enc + chr3L_11_3830001 chr3L_3830001 D4-c1 1199 chr3L 3845470 3845506 chr3L 3845553 3845589 20 82 2.5 7.0 4.8 3.4 119 chr3L 3845470 intergenic not near genes chr3L 3845530 intergenic not near genes chr3L 3845589 intergenic not near genes chr3L_20_3845001 chr3L_3845001 D4-c1 1200 chr3L 4015734 4015758 chr3L 4015818 4015842 11 84 3.0 5.5 4.2 2.1 108 chr3L 4015734 intergenic not near genes chr3L 4015788 intergenic not near genes chr3L 4015842 intergenic not near genes chr3L_11_4015001 chr3L_4015001 D4-c1 1201 chr3L 4146811 4146841 chr3L 4146894 4146924 11 83 0.0 3.0 1.5 4.4 113 chr3L 4146811 intergenic not near genes chr3L 4146868 intergenic not near genes chr3L 4146924 intergenic not near genes chr3L_11_4145001 chr3L_4145001 D4-c1 1202 chr3L 4214538 4214549 chr3L 4214681 4214692 4 143 4.5 6.0 5.2 0.6 154 chr3L 4214538 intron CG43367 + chr3L 4214615 intron CG43367 + chr3L 4214692 intron CG43367 + chr3L_4_4210001 chr3L_4210001 D4-c1 1203 chr3L 4229727 4229767 chr3L 4229823 4229861 17 93 6.0 7.5 6.8 2.2 134 chr3L 4229727 intron ImpL2 - chr3L 4229794 intron ImpL2 - chr3L 4229861 intron ImpL2 - chr3L_17_4225001 chr3L_4225001 D4-c1 1204 chr3L 4328740 4328765 chr3L 4336239 4336264 412 10 7499 3.0 7.5 5.2 1.6 7524 chr3L 4328740 intron Cip4 - chr3L 4332502 intron Cip4 - chr3L 4336264 intron Cip4 - chr3L_10_4330001 chr3L_4330001 D4-c1 1205 chr3L 4351810 4351848 chr3L 4351891 4351940 18 82 4.0 0.5 2.2 5.6 130 chr3L 4351810 intron Cip4 - chr3L 4351875 intron Cip4 - chr3L 4351940 intron Cip4 - chr3L_18_4350001 chr3L_4350001 D4-c1 1206 chr3L 4364206 4364224 chr3L 4364296 4364314 8 90 0.0 3.5 1.8 2.9 108 chr3L 4364206 intergenic Cip4 -,mRpS6 + chr3L 4364260 intergenic Cip4 -,mRpS6 + chr3L 4364314 intergenic Cip4 -,mRpS6 + chr3L_8_4360001 chr3L_4360001 D4-c1 1207 chr3L 4607277 4607292 chr3L 4607369 4607384 8 92 0.0 8.5 4.2 1.5 107 chr3L 4607277 intron Src64B - chr3L 4607330 intron Src64B - chr3L 4607384 intron Src64B - chr3L_8_4605001 chr3L_4605001 D4-c1 1208 chr3L 4797961 4797990 chr3L 4798042 4798071 22 81 4.0 4.5 4.2 4.2 110 chr3L 4797961 intergenic not near genes chr3L 4798016 intergenic not near genes chr3L 4798071 intergenic not near genes chr3L_22_4795001 chr3L_4795001 D4-c1 1209 chr3L 4837885 4837924 chr3L 4837965 4838004 10 80 2.5 3.5 3.0 2.5 119 chr3L 4837885 3` UTR CG13707 - chr3L 4837944 3` UTR CG13707 - chr3L 4838004 3` UTR CG13707 - chr3L_10_4835001 chr3L_4835001 D4-c1 1210 chr3L 4858303 4858335 chr3L 4858394 4858426 18 91 5.0 9.0 7.0 2.2 123 chr3L 4858303 intergenic not near genes chr3L 4858364 intergenic not near genes chr3L 4858426 intergenic not near genes chr3L_18_4855001 chr3L_4855001 D4-c1 1211 chr3L 4864458 4864470 chr3L 4864695 4864707 10 237 6.5 3.0 4.8 1.7 249 chr3L 4864458 intron CG17150 + chr3L 4864582 intron CG17150 + chr3L 4864707 intron CG17150 + chr3L_10_4860001 chr3L_4860001 D4-c1 1212 chr3L 4901126 4901155 chr3L 4907317 4907346 diver 18 6191 4.5 1.0 2.8 4.7 6220 chr3L 4901126 intergenic CG13704 + chr3L 4904236 intergenic not near genes chr3L 4907346 intergenic not near genes chr3L_18_4900001 chr3L_4900001 D4-c1 1213 chr3L 4907979 4907985 chr3L 4908056 4908062 4 77 2.0 2.5 2.2 1.2 83 chr3L 4907979 intergenic not near genes chr3L 4908020 intergenic not near genes chr3L 4908062 intergenic not near genes chr3L_4_4905001 chr3L_4905001 D4-c1 1214 chr3L 4989176 4989188 chr3L 4989267 4989279 7 91 0.0 4.0 2.0 2.3 103 chr3L 4989176 intron Con - chr3L 4989228 intron Con - chr3L 4989279 intron Con - chr3L_7_4985001 chr3L_4985001 D4-c1 1215 chr3L 5034155 5034192 chr3L 5043308 5043345 roo 4 9153 4.0 2.0 3.0 1.0 9190 chr3L 5034155 intron Con - chr3L 5038750 intron Con - chr3L 5043345 intron Con - chr3L_4_5035001 chr3L_5035001 D4-c1 1216 chr3L 5045456 5045487 chr3L 5050238 5050269 Doc 12 4782 5.5 4.5 5.0 2.0 4813 chr3L 5045456 intron Con - chr3L 5047862 intron Con - chr3L 5050269 intron Con - chr3L_12_5045001 chr3L_5045001 D4-c1 1217 chr3L 5054941 5054968 chr3L 5055022 5055049 9 79 3.5 8.0 5.8 1.3 108 chr3L 5054941 intron Con - chr3L 5054995 intron Con - chr3L 5055049 intron Con - chr3L_9_5050001 chr3L_5050001 D4-c1 1218 chr3L 5081852 5081878 chr3L 5081932 5081958 15 80 6.5 9.0 7.8 1.7 106 chr3L 5081852 intergenic not near genes chr3L 5081905 intergenic not near genes chr3L 5081958 intergenic not near genes chr3L_15_5080001 chr3L_5080001 D4-c1 1219 chr3L 5103611 5103631 chr3L 5103692 5103712 9 81 1.5 0.0 0.8 5.0 101 chr3L 5103611 intergenic not near genes chr3L 5103662 intergenic not near genes chr3L 5103712 intergenic not near genes chr3L_9_5100001 chr3L_5100001 D4-c1 1220 chr3L 5104484 5104505 chr3L 5124619 5124640 10 20135 1.0 5.0 3.0 2.5 20156 chr3L 5104484 intergenic not near genes chr3L 5114562 intergenic not near genes chr3L 5124640 intergenic not near genes chr3L_10_5110001 chr3L_5110001 D4-c1 1221 chr3L 5164639 5164665 chr3L 5164716 5164742 10 77 5.5 4.0 4.8 1.7 103 chr3L 5164639 intron shep - chr3L 5164690 intron shep - chr3L 5164742 intron shep - chr3L_10_5160001 chr3L_5160001 D4-c1 1222 chr3L 5177661 5177680 chr3L 5177759 5177778 9 97 4.0 3.0 3.5 2.0 117 chr3L 5177661 intron shep - chr3L 5177720 intron shep - chr3L 5177778 intron shep - chr3L_9_5175001 chr3L_5175001 D4-c1 1223 chr3L 5278511 5278546 chr3L 5278588 5278623 9 77 1.5 3.0 2.2 2.8 112 chr3L 5278511 intergenic not near genes chr3L 5278567 intergenic not near genes chr3L 5278623 intergenic not near genes chr3L_9_5275001 chr3L_5275001 D4-c1 1224 chr3L 5458061 5458078 chr3L 5466664 5466669 Max-element 7 8599 8.0 4.5 6.2 1.0 8608 chr3L 5458061 intergenic not near genes chr3L 5462365 intergenic not near genes chr3L 5466669 intergenic not near genes chr3L_7_5460001 chr3L_5460001 D4-c1 1225 chr3L 5485254 5485277 chr3L 5485562 5485585 11 308 4.0 2.5 3.2 2.6 331 chr3L 5485254 intergenic not near genes chr3L 5485420 intergenic not near genes chr3L 5485585 intergenic not near genes chr3L_11_5485001 chr3L_5485001 D4-c1 1226 chr3L 5527601 5527629 chr3L 5527752 5527780 15 152 39.0 29.5 34.2 0.4 179 chr3L 5527601 intron Lkr - chr3L 5527690 intron Lkr - chr3L 5527780 intron Lkr - chr3L_15_5525001 chr3L_5525001 D4-c1 1227 chr3L 5537729 5537756 chr3L 5538072 5538073 jockey 16 341 3.0 7.0 5.0 2.7 344 chr3L 5537729 intergenic not near genes chr3L 5537901 intergenic not near genes chr3L 5538073 intergenic CG10625 - chr3L_16_5535001 chr3L_5535001 D4-c1 1228 chr3L 5666284 5666319 chr3L 5666377 5666404 5 90 0.0 0.5 0.2 4.2 120 chr3L 5666284 intron sif + chr3L 5666344 intron sif + chr3L 5666404 intron sif + chr3L_5_5665001 chr3L_5665001 D4-c1 1229 chr3L 5727172 5727199 chr3L 5727646 5727673 12 474 7.0 5.0 6.0 1.7 501 chr3L 5727172 intron sif + chr3L 5727422 intron sif + chr3L 5727673 intron sif + chr3L_12_5725001 chr3L_5725001 D4-c1 1230 chr3L 5818268 5818296 chr3L 5818353 5818381 19 85 5.5 2.0 3.8 4.0 113 chr3L 5818268 exon vn - chr3L 5818324 intron vn - chr3L 5818381 intron vn - chr3L_19_5815001 chr3L_5815001 D4-c1 1231 chr3L 5908077 5908107 chr3L 5908158 5908188 9 81 2.5 1.5 2.0 3.0 111 chr3L 5908077 intron CG13288 + chr3L 5908132 intron CG13288 + chr3L 5908188 intron CG13288 + chr3L_9_5905001 chr3L_5905001 D4-c1 1232 chr3L 5910032 5910064 chr3L 5910274 5910306 pogo 8 242 6.0 5.0 5.5 1.2 274 chr3L 5910032 intron CG13288 + chr3L 5910169 intron CG13288 + chr3L 5910306 intron CG13288 + chr3L_8_5910001 chr3L_5910001 D4-c1 1233 chr3L 5926317 5926341 chr3L 5926508 5926532 BS 7 189 8.0 8.0 8.0 0.8 215 chr3L 5926317 intron Vap-33B + chr3L 5926424 intron Vap-33B + chr3L 5926532 intron Vap-33B + chr3L_7_5925001 chr3L_5925001 D4-c1 1234 chr3L 5926342 5926349 chr3L 5926507 5926540 BS 5 186 7.0 8.0 7.5 0.6 198 chr3L 5926342 intron Vap-33B + chr3L 5926441 intron Vap-33B + chr3L 5926540 intron Vap-33B + chr3L_5_5925001 chr3L_5925001 D4-c1 1235 chr3L 5940060 5940074 chr3L 5940291 5940305 11 231 8.5 6.5 7.5 1.3 245 chr3L 5940060 intron CG33993 - chr3L 5940182 intron CG33993 - chr3L 5940305 intron CG33993 - chr3L_11_5940001 chr3L_5940001 D4-c1 1236 chr3L 5940076 5940093 chr3L 5940290 5940324 17 230 4.5 5.5 5.0 2.8 248 chr3L 5940076 intron CG33993 - chr3L 5940200 intron CG33993 - chr3L 5940324 intron CG33993 - chr3L_17_5940001 chr3L_5940001 D4-c1 1237 chr3L 5992593 5992621 chr3L 5992694 5992724 17 103 4.5 5.5 5.0 2.8 131 chr3L 5992593 intergenic not near genes chr3L 5992658 intergenic not near genes chr3L 5992724 intergenic not near genes chr3L_17_5990001 chr3L_5990001 D4-c1 1238 chr3L 6001679 6001715 chr3L 6004380 6004416 jockey 8 2701 4.5 2.5 3.5 1.8 2737 chr3L 6001679 intron PVRAP + chr3L 6003048 intron PVRAP + chr3L 6004416 intron PVRAP + chr3L_8_6000001 chr3L_6000001 D4-c1 1239 chr3L 6040365 6040393 chr3L 6042722 6042750 Doc 7 2357 3.5 2.5 3.0 1.8 2385 chr3L 6040365 intergenic Jon65Aiv + chr3L 6041558 intergenic not near genes chr3L 6042750 intergenic not near genes chr3L_7_6040001 chr3L_6040001 D4-c1 1240 chr3L 6052646 6052668 chr3L 6052732 6052754 16 86 12.5 18.0 15.2 1.0 108 chr3L 6052646 exon Jon65Aii + chr3L 6052700 intron Jon65Aii + chr3L 6052754 exon Jon65Aii + chr3L_16_6050001 chr3L_6050001 D4-c1 1241 chr3L 6159871 6159893 chr3L 6159962 6159984 14 91 7.5 4.5 6.0 2.0 113 chr3L 6159871 intergenic not near genes chr3L 6159928 intergenic not near genes chr3L 6159984 intergenic not near genes chr3L_14_6155001 chr3L_6155001 D4-c1 1242 chr3L 6220911 6220946 chr3L 6230064 6230099 roo 17 9152 7.0 5.5 6.2 2.4 9188 chr3L 6220911 5` UTR pncr008:3L + chr3L 6225505 intergenic not near genes chr3L 6230099 intergenic not near genes chr3L_17_6225001 chr3L_6225001 D4-c1 1243 chr3L 6335007 6335040 chr3L 6335479 6335512 297 12 472 5.0 8.0 6.5 1.6 505 chr3L 6335007 intron CG13300 - chr3L 6335260 intron CG13300 - chr3L 6335512 intron CG13300 - chr3L_12_6335001 chr3L_6335001 D4-c1 1244 chr3L 6353376 6353398 chr3L 6353457 6353479 15 80 6.5 5.5 6.0 2.1 103 chr3L 6353376 intergenic not near genes chr3L 6353428 intergenic not near genes chr3L 6353479 intergenic not near genes chr3L_15_6350001 chr3L_6350001 D4-c1 1245 chr3L 6353399 6353407 chr3L 6353455 6353488 4 72 3.5 4.5 4.0 0.8 89 chr3L 6353399 intergenic not near genes chr3L 6353444 intergenic not near genes chr3L 6353488 intergenic not near genes chr3L_4_6350001 chr3L_6350001 D4-c1 1246 chr3L 6362385 6362411 chr3L 6362462 6362489 6 77 2.5 0.0 1.2 2.7 104 chr3L 6362385 intergenic not near genes chr3L 6362437 intergenic not near genes chr3L 6362489 intergenic not near genes chr3L_6_6360001 chr3L_6360001 D4-c1 1247 chr3L 6372131 6372148 chr3L 6372216 6372234 10 86 9.0 0.0 4.5 1.8 103 chr3L 6372131 intergenic not near genes chr3L 6372182 intergenic not near genes chr3L 6372234 intergenic not near genes chr3L_10_6370001 chr3L_6370001 D4-c1 1248 chr3L 6405659 6405689 chr3L 6432124 6432152 roo 9 26465 5.0 3.5 4.2 1.7 26493 chr3L 6405659 intron CG42747 + chr3L 6418906 intron CG42747 + chr3L 6432152 intron CG42747 + chr3L_9_6415001 chr3L_6415001 D4-c1 1249 chr3L 6442149 6442185 chr3L 6442362 6442398 12 213 36.5 41.5 39.0 0.3 249 chr3L 6442149 intron CG42747 + chr3L 6442274 intron CG42747 + chr3L 6442398 intron CG42747 + chr3L_12_6440001 chr3L_6440001 D4-c1 1250 chr3L 6443164 6443174 chr3L 6443375 6443385 4 211 4.5 0.0 2.2 1.2 221 chr3L 6443164 intron CG42747 + chr3L 6443274 intron CG42747 + chr3L 6443385 intron CG42747 + chr3L_4_6440001 chr3L_6440001 D4-c1 1251 chr3L 6575544 6575566 chr3L 6575704 6575726 12 160 2.0 3.5 2.8 3.2 182 chr3L 6575544 intron,intron CG18769 +,jv - chr3L 6575635 intron,intron CG18769 +,jv - chr3L 6575726 intron,intron CG18769 +,jv - chr3L_12_6575001 chr3L_6575001 D4-c1 1252 chr3L 6577641 6577664 chr3L 6577753 6577774 11 112 5.5 6.0 5.8 1.6 133 chr3L 6577641 intron,intron CG18769 +,jv - chr3L 6577708 intron,intron CG18769 +,jv - chr3L 6577774 intron,intron CG18769 +,jv - chr3L_11_6575001 chr3L_6575001 D4-c1 1253 chr3L 6580402 6580438 chr3L 6580507 6580543 29 105 2.5 8.5 5.5 4.5 141 chr3L 6580402 intron,intron CG18769 +,jv - chr3L 6580472 intron,intron CG18769 +,jv - chr3L 6580543 intron,intron CG18769 +,jv - chr3L_29_6580001 chr3L_6580001 D4-c1 1254 chr3L 6604290 6604301 chr3L 6604368 6604379 7 78 0.0 6.5 3.2 1.7 89 chr3L 6604290 intron CG8368 + chr3L 6604334 intron CG8368 + chr3L 6604379 intron,3` UTR CG8368 +,zpg - chr3L_7_6600001 chr3L_6600001 D4-c1 1255 chr3L 6616200 6616234 chr3L 6632697 6632731 18 16495 9.5 6.0 7.8 2.0 16531 chr3L 6616200 exon CG8398 + chr3L 6624466 5` UTR GluRIA + chr3L 6632731 exon GluRIA + chr3L_18_6620001 chr3L_6620001 D4-c1 1256 chr3L 6637112 6637139 chr3L 6637194 6637221 9 81 3.0 2.5 2.8 2.4 109 chr3L 6637112 intergenic not near genes chr3L 6637166 intergenic not near genes chr3L 6637221 intergenic not near genes chr3L_9_6635001 chr3L_6635001 D4-c1 1257 chr3L 6652077 6652109 chr3L 6652156 6652188 18 79 2.5 3.5 3.0 4.5 111 chr3L 6652077 intergenic not near genes chr3L 6652132 intergenic not near genes chr3L 6652188 intergenic not near genes chr3L_18_6650001 chr3L_6650001 D4-c1 1258 chr3L 6692559 6692564 chr3L 6692639 6692644 4 80 6.0 0.0 3.0 1.0 85 chr3L 6692559 5` UTR SP1173 - chr3L 6692602 intron SP1173 - chr3L 6692644 intron SP1173 - chr3L_4_6690001 chr3L_6690001 D4-c1 1259 chr3L 6781122 6781134 chr3L 6783136 6783148 Doc 5 2014 7.5 0.0 3.8 1.0 2026 chr3L 6781122 intergenic not near genes chr3L 6782135 intergenic not near genes chr3L 6783148 intergenic not near genes chr3L_5_6780001 chr3L_6780001 D4-c1 1260 chr3L 6844368 6844390 chr3L 6844515 6844537 6 147 1.5 4.0 2.8 1.6 169 chr3L 6844368 intergenic not near genes chr3L 6844452 intergenic not near genes chr3L 6844537 intergenic not near genes chr3L_6_6840001 chr3L_6840001 D4-c1 1261 chr3L 6855919 6855949 chr3L 6860703 6860734 Doc 10 4785 5.5 1.5 3.5 2.2 4815 chr3L 6855919 intergenic not near genes chr3L 6858326 intergenic not near genes chr3L 6860734 intergenic not near genes chr3L_10_6855001 chr3L_6855001 D4-c1 1262 chr3L 6886120 6886136 chr3L 6887334 6887352 11 1216 28.5 33.5 31.0 0.3 1232 chr3L 6886120 intergenic not near genes chr3L 6886736 intergenic not near genes chr3L 6887352 intergenic not near genes chr3L_11_6885001 chr3L_6885001 D4-c1 1263 chr3L 6887515 6887547 chr3L 6895008 6895040 roo 7 7493 4.5 4.5 4.5 1.3 7525 chr3L 6887515 intergenic not near genes chr3L 6891278 intergenic not near genes chr3L 6895040 intergenic not near genes chr3L_7_6890001 chr3L_6890001 D4-c1 1264 chr3L 6900892 6900904 chr3L 6900969 6900981 7 77 0.0 4.5 2.2 2.2 89 chr3L 6900892 intergenic not near genes chr3L 6900936 intergenic not near genes chr3L 6900981 intergenic not near genes chr3L_7_6900001 chr3L_6900001 D4-c1 1265 chr3L 6908012 6908036 chr3L 6908098 6908101 8 83 6.0 0.5 3.2 1.9 89 chr3L 6908012 intergenic not near genes chr3L 6908056 intergenic not near genes chr3L 6908101 intergenic not near genes chr3L_8_6905001 chr3L_6905001 D4-c1 1266 chr3L 6974502 6974514 chr3L 6974604 6974616 7 102 0.5 8.0 4.2 1.3 114 chr3L 6974502 intron Galphai - chr3L 6974559 intron Galphai - chr3L 6974616 intron Galphai - chr3L_7_6970001 chr3L_6970001 D4-c1 1267 chr3L 6994886 6994917 chr3L 6995498 6995529 BS 14 612 1.0 4.5 2.8 3.7 643 chr3L 6994886 intergenic bin + chr3L 6995208 intergenic not near genes chr3L 6995529 intergenic not near genes chr3L_14_6995001 chr3L_6995001 D4-c1 1268 chr3L 7033170 7033205 chr3L 7033251 7033286 18 80 4.0 9.5 6.8 2.3 116 chr3L 7033170 intron Mp + chr3L 7033228 intron Mp + chr3L 7033286 intron Mp + chr3L_18_7030001 chr3L_7030001 D4-c1 1269 chr3L 7067138 7067175 chr3L 7067322 7067359 21 184 4.5 4.5 4.5 3.8 221 chr3L 7067138 intron,intron CG8641 -,CG14823 + chr3L 7067248 intron,intron CG8641 -,CG14823 + chr3L 7067359 intron,intron CG8641 -,CG14823 + chr3L_21_7065001 chr3L_7065001 D4-c1 1270 chr3L 7187397 7187422 chr3L 7187480 7187505 6 83 0.0 1.5 0.8 3.3 108 chr3L 7187397 intron Dscam2 - chr3L 7187451 intron Dscam2 - chr3L 7187505 intron Dscam2 - chr3L_6_7185001 chr3L_7185001 D4-c1 1271 chr3L 7198629 7198653 chr3L 7198731 7198755 15 100 2.5 6.5 4.5 2.7 126 chr3L 7198629 intergenic not near genes chr3L 7198692 intergenic not near genes chr3L 7198755 intergenic not near genes chr3L_15_7195001 chr3L_7195001 D4-c1 1272 chr3L 7264883 7264892 chr3L 7264967 7264976 4 84 0.0 3.5 1.8 1.4 93 chr3L 7264883 intergenic not near genes chr3L 7264930 intergenic not near genes chr3L 7264976 intergenic not near genes chr3L_4_7260001 chr3L_7260001 D4-c1 1273 chr3L 7308186 7308221 chr3L 7308263 7308298 10 76 2.0 3.5 2.8 2.6 112 chr3L 7308186 intron unc-13-4A - chr3L 7308242 intron unc-13-4A - chr3L 7308298 intron unc-13-4A - chr3L_10_7305001 chr3L_7305001 D4-c1 1274 chr3L 7341216 7341252 chr3L 7341300 7341336 16 84 1.5 5.0 3.2 3.8 120 chr3L 7341216 intron lark + chr3L 7341276 intron lark + chr3L 7341336 intron lark + chr3L_16_7340001 chr3L_7340001 D4-c1 1275 chr3L 7355678 7355684 chr3L 7362666 7362698 14 6994 44.0 52.5 48.2 0.3 7020 chr3L 7355678 exon CTCF - chr3L 7359188 exon pst - chr3L 7362698 exon Sec63 + chr3L_14_7355001 chr3L_7355001 D4-c1 1276 chr3L 7377316 7377348 chr3L 7380421 7380454 297 14 3106 1.5 8.5 5.0 2.3 3138 chr3L 7377316 intron SMSr - chr3L 7378885 intron SMSr - chr3L 7380454 intron SMSr - chr3L_14_7375001 chr3L_7375001 D4-c1 1277 chr3L 7426645 7426677 chr3L 7426777 7426810 17 133 5.5 3.5 4.5 3.1 165 chr3L 7426645 intron CG42458 + chr3L 7426728 intron CG42458 + chr3L 7426810 intron CG42458 + chr3L_17_7425001 chr3L_7425001 D4-c1 1278 chr3L 7450687 7450714 chr3L 7450771 7450798 10 84 2.5 3.0 2.8 2.6 111 chr3L 7450687 intron CG42458 + chr3L 7450742 intron CG42458 + chr3L 7450798 intron CG42458 + chr3L_10_7450001 chr3L_7450001 D4-c1 1279 chr3L 7480052 7480065 chr3L 7480142 7480155 5 90 5.0 3.0 4.0 1.0 103 chr3L 7480052 intergenic not near genes chr3L 7480104 intergenic not near genes chr3L 7480155 intergenic not near genes chr3L_5_7480001 chr3L_7480001 D4-c1 1280 chr3L 7498757 7498783 chr3L 7503535 7503561 F-element 11 4778 3.5 5.0 4.2 2.1 4804 chr3L 7498757 5` UTR CG8539 - chr3L 7501159 intergenic not near genes chr3L 7503561 intergenic not near genes chr3L_11_7500001 chr3L_7500001 D4-c1 1281 chr3L 7505416 7505434 chr3L 7505493 7505511 6 77 10.0 1.0 5.5 0.9 95 chr3L 7505416 intergenic CG7548 - chr3L 7505464 intergenic CG7548 - chr3L 7505511 intergenic CG7548 - chr3L_6_7505001 chr3L_7505001 D4-c1 1282 chr3L 7574850 7574860 chr3L 7574928 7574938 5 78 0.0 0.0 0.0 5.0 88 chr3L 7574850 intergenic not near genes chr3L 7574894 intergenic not near genes chr3L 7574938 intergenic not near genes chr3L_5_7570001 chr3L_7570001 D4-c1 1283 chr3L 7576212 7576245 chr3L 7576301 7576334 14 88 3.5 3.5 3.5 3.1 122 chr3L 7576212 intergenic not near genes chr3L 7576273 intergenic not near genes chr3L 7576334 intergenic not near genes chr3L_14_7575001 chr3L_7575001 D4-c1 1284 chr3L 7581621 7581653 chr3L 7581706 7581738 13 84 5.5 5.5 5.5 2.0 117 chr3L 7581621 intergenic not near genes chr3L 7581680 intergenic not near genes chr3L 7581738 intergenic not near genes chr3L_13_7580001 chr3L_7580001 D4-c1 1285 chr3L 7591150 7591172 chr3L 7591242 7591264 15 92 4.0 4.0 4.0 3.0 114 chr3L 7591150 intergenic CG7716 - chr3L 7591207 intergenic CG7716 - chr3L 7591264 intergenic CG7716 - chr3L_15_7590001 chr3L_7590001 D4-c1 1286 chr3L 7617695 7617705 chr3L 7617805 7617815 4 110 5.0 0.0 2.5 1.1 120 chr3L 7617695 intron CG33275 + chr3L 7617755 intron CG33275 + chr3L 7617815 intron CG33275 + chr3L_4_7615001 chr3L_7615001 D4-c1 1287 chr3L 7708840 7708872 chr3L 7708942 7708974 12 101 7.0 4.0 5.5 1.8 134 chr3L 7708840 intron,intron CG32373 +,Ank2 - chr3L 7708907 intron,intron CG32373 +,Ank2 - chr3L 7708974 intron,intron CG32373 +,Ank2 - chr3L_12_7705001 chr3L_7705001 D4-c1 1288 chr3L 7711825 7711855 chr3L 7711902 7711921 11 76 1.5 6.0 3.8 2.3 96 chr3L 7711825 intron,intron CG32373 +,Ank2 - chr3L 7711873 intron,intron CG32373 +,Ank2 - chr3L 7711921 intron,intron CG32373 +,Ank2 - chr3L_11_7710001 chr3L_7710001 D4-c1 1289 chr3L 7726564 7726595 chr3L 7726873 7726904 15 309 5.5 1.0 3.2 3.6 340 chr3L 7726564 intron CG32373 + chr3L 7726734 intron CG32373 + chr3L 7726904 intron CG32373 + chr3L_15_7725001 chr3L_7725001 D4-c1 1290 chr3L 7749470 7749471 chr3L 11777678 11777678 6 4028207 16.0 29.5 22.8 0.3 4028208 chr3L 7749470 intron,3` UTR CG32373 +,CG13685 + chr3L 9763574 5` UTR CG8177 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_6_9760001 chr3L_9760001 D4-c1 1291 chr3L 7791414 7791416 chr3L 7791491 7791493 4 77 0.0 0.0 0.0 4.0 79 chr3L 7791414 intron CG32369 - chr3L 7791454 intron CG32369 - chr3L 7791493 intron CG32369 - chr3L_4_7790001 chr3L_7790001 D4-c1 1292 chr3L 7793719 7793739 chr3L 7800772 7800792 297 7 7053 5.5 5.5 5.5 1.1 7073 chr3L 7793719 intron CG32369 - chr3L 7797256 intron CG32369 - chr3L 7800792 intron CG32369 - chr3L_7_7795001 chr3L_7795001 D4-c1 1293 chr3L 7845388 7845400 chr3L 7845472 7845484 6 84 3.0 0.5 1.8 2.1 96 chr3L 7845388 intron Pdp1 - chr3L 7845436 intron Pdp1 - chr3L 7845484 intron Pdp1 - chr3L_6_7845001 chr3L_7845001 D4-c1 1294 chr3L 7886520 7886546 chr3L 7889039 7889065 Stalker4 7 2519 0.0 4.0 2.0 2.3 2545 chr3L 7886520 intron CG32365 + chr3L 7887792 intron CG32365 + chr3L 7889065 intron CG32365 + chr3L_7_7885001 chr3L_7885001 D4-c1 1295 chr3L 7916829 7916862 chr3L 7926001 7926033 roo 10 9172 2.0 2.5 2.2 3.1 9204 chr3L 7916829 3` UTR syd - chr3L 7921431 intron syd - chr3L 7926033 3` UTR syd - chr3L_10_7920001 chr3L_7920001 D4-c1 1296 chr3L 7985361 7985395 chr3L 7987690 7987724 NOF 16 2329 3.5 3.5 3.5 3.6 2363 chr3L 7985361 intron nmo + chr3L 7986542 intron nmo + chr3L 7987724 intron nmo + chr3L_16_7985001 chr3L_7985001 D4-c1 1297 chr3L 8456474 8456485 chr3L 8456568 8456579 4 94 8.5 11.0 9.8 0.4 105 chr3L 8456474 intron Gug + chr3L 8456526 intron Gug + chr3L 8456579 intron Gug + chr3L_4_8455001 chr3L_8455001 D4-c1 1298 chr3L 8481770 8481780 chr3L 8490930 8490940 roo 6 9159 10.5 6.0 8.2 0.7 9170 chr3L 8481770 intron CG43163 - chr3L 8486355 intron CG43163 - chr3L 8490940 intron CG43163 - chr3L_6_8485001 chr3L_8485001 D4-c1 1299 chr3L 8481782 8481806 chr3L 8490929 8490966 roo 12 9157 5.5 5.5 5.5 1.8 9184 chr3L 8481782 intron CG43163 - chr3L 8486374 intron CG43163 - chr3L 8490966 intron CG43163 - chr3L_12_8485001 chr3L_8485001 D4-c1 1300 chr3L 8498296 8498329 chr3L 8505764 8505797 blood 10 7468 2.5 5.5 4.0 2.0 7501 chr3L 8498296 intron CG43163 - chr3L 8502046 intron CG43163 - chr3L 8505797 intron CG43163 - chr3L_10_8500001 chr3L_8500001 D4-c1 1301 chr3L 8558665 8558695 chr3L 8558756 8558787 20 92 2.5 5.5 4.0 4.0 122 chr3L 8558665 intron rhea + chr3L 8558726 intron rhea + chr3L 8558787 intron rhea + chr3L_20_8555001 chr3L_8555001 D4-c1 1302 chr3L 8691164 8691192 chr3L 8691247 8691275 10 83 3.0 5.5 4.2 1.9 111 chr3L 8691164 intergenic not near genes chr3L 8691220 intergenic not near genes chr3L 8691275 intergenic not near genes chr3L_10_8690001 chr3L_8690001 D4-c1 1303 chr3L 8782126 8782152 chr3L 8782253 8782279 12 127 3.5 5.0 4.2 2.3 153 chr3L 8782126 intron Fhos + chr3L 8782202 intron Fhos + chr3L 8782279 intron Fhos + chr3L_12_8780001 chr3L_8780001 D4-c1 1304 chr3L 8791273 8791287 chr3L 8796694 8796708 I-element 7 5421 8.5 0.0 4.2 1.3 5435 chr3L 8791273 exon Fhos + chr3L 8793990 intron Fhos + chr3L 8796708 intron Fhos + chr3L_7_8790001 chr3L_8790001 D4-c1 1305 chr3L 8837380 8837404 chr3L 8837461 8837485 8 81 6.5 7.0 6.8 1.0 105 chr3L 8837380 intron,exon dally +,CG32026 + chr3L 8837432 intron,exon dally +,CG32026 + chr3L 8837485 intron,exon dally +,CG32026 + chr3L_8_8835001 chr3L_8835001 D4-c1 1306 chr3L 8849208 8849243 chr3L 8849289 8849324 17 81 2.0 0.5 1.2 7.7 116 chr3L 8849208 intron dally + chr3L 8849266 intron dally + chr3L 8849324 intron dally + chr3L_17_8845001 chr3L_8845001 D4-c1 1307 chr3L 8899110 8899135 chr3L 8899196 8899221 11 86 3.0 4.5 3.8 2.3 111 chr3L 8899110 intron TrpA1 - chr3L 8899166 intron TrpA1 - chr3L 8899221 intron TrpA1 - chr3L_11_8895001 chr3L_8895001 D4-c1 1308 chr3L 9003944 9003973 chr3L 9004030 9004059 15 86 5.5 5.0 5.2 2.4 115 chr3L 9003944 intergenic not near genes chr3L 9004002 intergenic not near genes chr3L 9004059 intergenic not near genes chr3L_15_9000001 chr3L_9000001 D4-c1 1309 chr3L 9013690 9013691 chr3L 18417066 18417066 5 9403376 33.0 32.0 32.5 0.1 9403376 chr3L 9013690 intron Doc2 - chr3L 13715378 intron bru-3 - chr3L 18417066 intergenic not near genes chr3L_5_13715001 chr3L_13715001 D4-c1 1310 chr3L 9030429 9030456 chr3L 9030509 9030536 5 80 1.0 0.0 0.5 3.3 107 chr3L 9030429 intergenic not near genes chr3L 9030482 intergenic not near genes chr3L 9030536 intergenic not near genes chr3L_5_9030001 chr3L_9030001 D4-c1 1311 chr3L 9076924 9076959 chr3L 9084485 9084520 412 11 7560 4.0 4.5 4.2 2.1 7596 chr3L 9076924 exon Tequila + chr3L 9080722 intron Tequila + chr3L 9084520 exon Tequila + chr3L_11_9080001 chr3L_9080001 D4-c1 1312 chr3L 9096202 9096206 chr3L 9096306 9096310 4 104 7.0 0.0 3.5 0.9 108 chr3L 9096202 intergenic not near genes chr3L 9096256 intergenic not near genes chr3L 9096310 intergenic not near genes chr3L_4_9095001 chr3L_9095001 D4-c1 1313 chr3L 9128201 9128217 chr3L 9128287 9128303 9 86 5.5 3.0 4.2 1.7 102 chr3L 9128201 intron bol - chr3L 9128252 intron bol - chr3L 9128303 intron bol - chr3L_9_9125001 chr3L_9125001 D4-c1 1314 chr3L 9130555 9130582 chr3L 9134317 9134344 412 14 3762 6.5 3.0 4.8 2.4 3789 chr3L 9130555 intergenic bol - chr3L 9132450 intergenic not near genes chr3L 9134344 intergenic Dhpr + chr3L_14_9130001 chr3L_9130001 D4-c1 1315 chr3L 9164695 9164731 chr3L 9166163 9166199 hobo 12 1468 2.0 1.0 1.5 4.8 1504 chr3L 9164695 intron Rdl - chr3L 9165447 intron Rdl - chr3L 9166199 intron Rdl - chr3L_12_9165001 chr3L_9165001 D4-c1 1316 chr3L 9219241 9219274 chr3L 9219914 9219947 jockey 23 672 6.5 9.0 7.8 2.6 706 chr3L 9219241 intergenic not near genes chr3L 9219594 intergenic not near genes chr3L 9219947 intergenic not near genes chr3L_23_9215001 chr3L_9215001 D4-c1 1317 chr3L 9254520 9254549 chr3L 9254814 9254843 13 294 1.0 5.0 3.0 3.2 323 chr3L 9254520 intron GluRIB + chr3L 9254682 intron GluRIB + chr3L 9254843 intron GluRIB + chr3L_13_9250001 chr3L_9250001 D4-c1 1318 chr3L 9270615 9270651 chr3L 9278371 9278402 roo 8 7755 3.5 5.0 4.2 1.5 7787 chr3L 9270615 intron GluRIB + chr3L 9274508 intron GluRIB + chr3L 9278402 exon GluRIB + chr3L_8_9270001 chr3L_9270001 D4-c1 1319 chr3L 9279899 9279928 chr3L 9279984 9280014 11 85 2.0 3.5 2.8 2.9 115 chr3L 9279899 intron GluRIB + chr3L 9279956 intron GluRIB + chr3L 9280014 intron GluRIB + chr3L_11_9275001 chr3L_9275001 D4-c1 1320 chr3L 9307795 9307796 chr3L 22908066 22908067 5 13600271 19.5 23.5 21.5 0.2 13600272 chr3L 9307795 intergenic not near genes chr3L 16107931 intron Zn72D - chr3L 22908067 intergenic not near genes chr3L_5_16105001 chr3L_16105001 D4-c1 1321 chr3L 9312725 9312730 chr3L 9312804 9312809 5 79 11.5 2.0 6.8 0.6 84 chr3L 9312725 intergenic not near genes chr3L 9312767 intergenic not near genes chr3L 9312809 intergenic not near genes chr3L_5_9310001 chr3L_9310001 D4-c1 1322 chr3L 9328390 9328411 chr3L 9328502 9328523 7 112 7.0 4.0 5.5 1.1 133 chr3L 9328390 intergenic not near genes chr3L 9328456 intergenic not near genes chr3L 9328523 intergenic not near genes chr3L_7_9325001 chr3L_9325001 D4-c1 1323 chr3L 9348467 9348487 chr3L 9348970 9348990 6 503 1.0 0.5 0.8 3.3 523 chr3L 9348467 intergenic PGRP-LC + chr3L 9348728 intergenic PGRP-LC + chr3L 9348990 intergenic not near genes chr3L_6_9345001 chr3L_9345001 D4-c1 1324 chr3L 9359587 9359623 chr3L 9359679 9359715 14 92 5.5 3.0 4.2 2.7 128 chr3L 9359587 3` UTR CG32039 + chr3L 9359651 3` UTR CG32039 + chr3L 9359715 3` UTR CG32039 + chr3L_14_9355001 chr3L_9355001 D4-c1 1325 chr3L 9443509 9443535 chr3L 9445301 9445327 S-element 9 1792 4.0 0.0 2.0 3.0 1818 chr3L 9443509 intron CG33926 + chr3L 9444418 intron CG33926 + chr3L 9445327 intron CG33926 + chr3L_9_9440001 chr3L_9440001 D4-c1 1326 chr3L 9526483 9526515 chr3L 9528164 9528196 Doc 9 1681 3.5 2.0 2.8 2.4 1713 chr3L 9526483 intergenic not near genes chr3L 9527340 intergenic not near genes chr3L 9528196 intergenic not near genes chr3L_9_9525001 chr3L_9525001 D4-c1 1327 chr3L 9637853 9637879 chr3L 9637936 9637962 14 83 6.5 9.5 8.0 1.6 109 chr3L 9637853 intron fry - chr3L 9637908 intron fry - chr3L 9637962 intron fry - chr3L_14_9635001 chr3L_9635001 D4-c1 1328 chr3L 9646465 9646500 chr3L 9646591 9646600 5 121 5.0 1.0 3.0 1.2 135 chr3L 9646465 intron,intron fry -,CG33696 + chr3L 9646532 intron,intron fry -,CG33696 + chr3L 9646600 intron,intron fry -,CG33696 + chr3L_5_9645001 chr3L_9645001 D4-c1 1329 chr3L 9646813 9646836 chr3L 9646912 9646935 7 99 4.0 3.5 3.8 1.5 122 chr3L 9646813 intron,intron fry -,CG33696 + chr3L 9646874 intron,intron fry -,CG33696 + chr3L 9646935 intron,intron fry -,CG33696 + chr3L_7_9645001 chr3L_9645001 D4-c1 1330 chr3L 9660896 9660924 chr3L 9661070 9661098 26 173 3.0 9.5 6.2 3.6 202 chr3L 9660896 intron fry - chr3L 9660997 intron fry - chr3L 9661098 intron fry - chr3L_26_9660001 chr3L_9660001 D4-c1 1331 chr3L 9742041 9742058 chr3L 9742476 9742493 10 435 0.5 0.0 0.2 8.3 452 chr3L 9742041 intron,intron CG42268 -,CR44348 + chr3L 9742267 intron,intron CG42268 -,CR44348 + chr3L 9742493 intron,intron CG42268 -,CR44348 + chr3L_10_9740001 chr3L_9740001 D4-c1 1332 chr3L 9753866 9753900 chr3L 9753953 9753961 13 84 7.5 5.0 6.2 1.8 95 chr3L 9753866 intron CG42268 - chr3L 9753914 intron CG42268 - chr3L 9753961 intron CG42268 - chr3L_13_9750001 chr3L_9750001 D4-c1 1333 chr3L 9929669 9929697 chr3L 9938451 9938479 roo 13 8782 1.0 4.0 2.5 3.7 8810 chr3L 9929669 intron CG34356 + chr3L 9934074 intron CG34356 + chr3L 9938479 intron CG34356 + chr3L_13_9930001 chr3L_9930001 D4-c1 1334 chr3L 10003156 10003181 chr3L 10003254 10003279 7 98 4.5 4.0 4.2 1.3 123 chr3L 10003156 intron dpr6 + chr3L 10003218 intron dpr6 + chr3L 10003279 intron dpr6 + chr3L_7_10000001 chr3L_10000001 D4-c1 1335 chr3L 10007191 10007206 chr3L 10007295 10007310 6 104 1.0 6.0 3.5 1.3 119 chr3L 10007191 intron dpr6 + chr3L 10007250 intron dpr6 + chr3L 10007310 intron dpr6 + chr3L_6_10005001 chr3L_10005001 D4-c1 1336 chr3L 10032562 10032568 chr3L 10032650 10032656 6 88 0.0 6.0 3.0 1.5 94 chr3L 10032562 intron dpr6 + chr3L 10032609 intron dpr6 + chr3L 10032656 intron dpr6 + chr3L_6_10030001 chr3L_10030001 D4-c1 1337 chr3L 10099085 10099113 chr3L 10099171 10099199 14 86 4.0 3.5 3.8 2.9 114 chr3L 10099085 intron dpr6 + chr3L 10099142 intron dpr6 + chr3L 10099199 intron dpr6 + chr3L_14_10095001 chr3L_10095001 D4-c1 1338 chr3L 10102054 10102067 chr3L 10102151 10102164 5 97 0.5 5.0 2.8 1.3 110 chr3L 10102054 intron dpr6 + chr3L 10102109 intron dpr6 + chr3L 10102164 intron dpr6 + chr3L_5_10100001 chr3L_10100001 D4-c1 1339 chr3L 10161434 10161460 chr3L 10161514 10161540 8 80 0.0 6.5 3.2 1.9 106 chr3L 10161434 intron dpr10 - chr3L 10161487 intron dpr10 - chr3L 10161540 intron dpr10 - chr3L_8_10160001 chr3L_10160001 D4-c1 1340 chr3L 10214733 10214831 chr3L 10214821 10214934 10 97 0.0 0.0 0.0 10.0 201 chr3L 10214733 intergenic not near genes chr3L 10214834 intergenic not near genes chr3L 10214934 intergenic not near genes chr3L_10_10210001 chr3L_10210001 D4-c1 1341 chr3L 10222739 10222771 chr3L 10222820 10222852 8 81 2.5 3.5 3.0 2.0 113 chr3L 10222739 intron scramb1 - chr3L 10222796 intron scramb1 - chr3L 10222852 intron scramb1 - chr3L_8_10220001 chr3L_10220001 D4-c1 1342 chr3L 10245639 10245681 chr3L 10245787 10245829 19 147 3.5 4.0 3.8 4.0 190 chr3L 10245639 intergenic not near genes chr3L 10245734 intergenic not near genes chr3L 10245829 intergenic not near genes chr3L_19_10245001 chr3L_10245001 D4-c1 1343 chr3L 10255379 10255401 chr3L 10255478 10255500 5 99 0.0 1.0 0.5 3.3 121 chr3L 10255379 intergenic not near genes chr3L 10255440 intergenic not near genes chr3L 10255500 intergenic not near genes chr3L_5_10255001 chr3L_10255001 D4-c1 1344 chr3L 10298666 10298701 chr3L 10298754 10298789 13 88 1.0 1.5 1.2 5.9 123 chr3L 10298666 intergenic not near genes chr3L 10298728 intergenic not near genes chr3L 10298789 intergenic not near genes chr3L_13_10295001 chr3L_10295001 D4-c1 1345 chr3L 10308737 10308771 chr3L 10308814 10308849 21 78 4.5 6.5 5.5 3.2 112 chr3L 10308737 intergenic not near genes chr3L 10308793 intergenic not near genes chr3L 10308849 intergenic not near genes chr3L_21_10305001 chr3L_10305001 D4-c1 1346 chr3L 10314127 10314154 chr3L 10314214 10314241 9 86 2.5 3.5 3.0 2.2 114 chr3L 10314127 intergenic not near genes chr3L 10314184 intergenic not near genes chr3L 10314241 intergenic not near genes chr3L_9_10310001 chr3L_10310001 D4-c1 1347 chr3L 10314477 10314507 chr3L 10314558 10314588 7 81 5.0 1.5 3.2 1.7 111 chr3L 10314477 intergenic not near genes chr3L 10314532 intergenic not near genes chr3L 10314588 intergenic not near genes chr3L_7_10310001 chr3L_10310001 D4-c1 1348 chr3L 10328116 10328126 chr3L 10328229 10328239 4 113 1.5 4.0 2.8 1.1 123 chr3L 10328116 intergenic not near genes chr3L 10328178 intergenic not near genes chr3L 10328239 intergenic not near genes chr3L_4_10325001 chr3L_10325001 D4-c1 1349 chr3L 10395534 10395570 chr3L 10395688 10395724 21 153 5.0 8.0 6.5 2.8 190 chr3L 10395534 intergenic not near genes chr3L 10395629 intergenic not near genes chr3L 10395724 intergenic not near genes chr3L_21_10395001 chr3L_10395001 D4-c1 1350 chr3L 10414942 10414971 chr3L 10417315 10417344 Doc 15 2372 5.5 6.0 5.8 2.2 2402 chr3L 10414942 intergenic CG12362 + chr3L 10416143 intergenic not near genes chr3L 10417344 intergenic not near genes chr3L_15_10415001 chr3L_10415001 D4-c1 1351 chr3L 10417571 10417602 chr3L 10417649 10417680 13 78 6.0 7.5 6.8 1.7 109 chr3L 10417571 intergenic not near genes chr3L 10417626 intergenic not near genes chr3L 10417680 intergenic not near genes chr3L_13_10415001 chr3L_10415001 D4-c1 1352 chr3L 10473807 10473810 chr3L 10473884 10473887 4 77 11.5 0.0 5.8 0.6 80 chr3L 10473807 intergenic not near genes chr3L 10473847 intergenic not near genes chr3L 10473887 intergenic not near genes chr3L_4_10470001 chr3L_10470001 D4-c1 1353 chr3L 10526635 10526651 chr3L 10526717 10526733 14 82 3.0 5.0 4.0 2.8 98 chr3L 10526635 intron A2bp1 + chr3L 10526684 intron A2bp1 + chr3L 10526733 intron A2bp1 + chr3L_14_10525001 chr3L_10525001 D4-c1 1354 chr3L 10563277 10563313 chr3L 10563358 10563394 11 81 3.5 2.5 3.0 2.8 117 chr3L 10563277 intron A2bp1 + chr3L 10563336 intron A2bp1 + chr3L 10563394 intron A2bp1 + chr3L_11_10560001 chr3L_10560001 D4-c1 1355 chr3L 10600454 10600468 chr3L 10600537 10600550 6 83 7.0 3.5 5.2 1.0 96 chr3L 10600454 intergenic not near genes chr3L 10600502 intergenic not near genes chr3L 10600550 intergenic not near genes chr3L_6_10600001 chr3L_10600001 D4-c1 1356 chr3L 10621847 10621879 chr3L 10621935 10621967 9 88 2.5 4.0 3.2 2.1 120 chr3L 10621847 intergenic not near genes chr3L 10621907 intergenic not near genes chr3L 10621967 intergenic not near genes chr3L_9_10620001 chr3L_10620001 D4-c1 1357 chr3L 10730112 10730128 chr3L 10730206 10730222 7 94 2.5 3.0 2.8 1.8 110 chr3L 10730112 intergenic not near genes chr3L 10730167 intergenic not near genes chr3L 10730222 intergenic not near genes chr3L_7_10730001 chr3L_10730001 D4-c1 1358 chr3L 10762830 10762859 chr3L 10762915 10762923 12 81 2.5 3.5 3.0 3.0 93 chr3L 10762830 intergenic not near genes chr3L 10762876 intergenic not near genes chr3L 10762923 intergenic not near genes chr3L_12_10760001 chr3L_10760001 D4-c1 1359 chr3L 10912103 10912121 chr3L 10912187 10912212 15 91 5.0 6.5 5.8 2.2 109 chr3L 10912103 intergenic not near genes chr3L 10912158 intergenic not near genes chr3L 10912212 intergenic not near genes chr3L_15_10910001 chr3L_10910001 D4-c1 1360 chr3L 10912123 10912125 chr3L 10912186 10912216 5 79 3.0 6.5 4.8 0.9 93 chr3L 10912123 intergenic not near genes chr3L 10912170 intergenic not near genes chr3L 10912216 intergenic not near genes chr3L_5_10910001 chr3L_10910001 D4-c1 1361 chr3L 10937850 10937877 chr3L 10937928 10937955 13 78 2.0 5.0 3.5 2.9 105 chr3L 10937850 intergenic not near genes chr3L 10937902 intergenic not near genes chr3L 10937955 intergenic not near genes chr3L_13_10935001 chr3L_10935001 D4-c1 1362 chr3L 10942056 10942072 chr3L 10942140 10942155 9 83 9.5 9.5 9.5 0.9 99 chr3L 10942056 intergenic not near genes chr3L 10942106 intergenic not near genes chr3L 10942155 intergenic not near genes chr3L_9_10940001 chr3L_10940001 D4-c1 1363 chr3L 10957002 10957029 chr3L 10957079 10957106 10 77 6.0 6.5 6.2 1.4 104 chr3L 10957002 intergenic not near genes chr3L 10957054 intergenic not near genes chr3L 10957106 intergenic not near genes chr3L_10_10955001 chr3L_10955001 D4-c1 1364 chr3L 11083500 11083539 chr3L 11083599 11083638 20 99 4.0 5.5 4.8 3.4 138 chr3L 11083500 intron JIL-1 - chr3L 11083569 intron JIL-1 - chr3L 11083638 intron JIL-1 - chr3L_20_11080001 chr3L_11080001 D4-c1 1365 chr3L 11085685 11085703 chr3L 11085769 11085787 13 84 2.0 10.0 6.0 1.9 102 chr3L 11085685 exon JIL-1 - chr3L 11085736 intron JIL-1 - chr3L 11085787 intron JIL-1 - chr3L_13_11085001 chr3L_11085001 D4-c1 1366 chr3L 11087057 11087090 chr3L 11088847 11088880 S-element 14 1790 0.0 4.0 2.0 4.7 1823 chr3L 11087057 intron JIL-1 - chr3L 11087968 intron JIL-1 - chr3L 11088880 intron JIL-1 - chr3L_14_11085001 chr3L_11085001 D4-c1 1367 chr3L 11105290 11105328 chr3L 11107002 11107040 X-element 11 1712 3.5 5.0 4.2 2.1 1750 chr3L 11105290 intergenic not near genes chr3L 11106165 intergenic not near genes chr3L 11107040 exon CG32073 - chr3L_11_11105001 chr3L_11105001 D4-c1 1368 chr3L 11135531 11135807 chr3L 11135762 11135893 13 108 1.5 1.5 1.5 5.2 362 chr3L 11135531 intergenic CG14143 + chr3L 11135712 intergenic CG14143 +,CG32082 + chr3L 11135893 intergenic CG32082 +,CG14143 + chr3L_13_11135001 chr3L_11135001 D4-c1 1369 chr3L 11145541 11145553 chr3L 11145632 11145644 7 91 0.0 3.5 1.8 2.5 103 chr3L 11145541 intron CG32082 + chr3L 11145592 intron CG32082 + chr3L 11145644 intron CG32082 + chr3L_7_11145001 chr3L_11145001 D4-c1 1370 chr3L 11224547 11224566 chr3L 11224670 11224689 11 123 4.5 3.5 4.0 2.2 142 chr3L 11224547 intron CG42671 + chr3L 11224618 intron CG42671 + chr3L 11224689 intron CG42671 + chr3L_11_11220001 chr3L_11220001 D4-c1 1371 chr3L 11229988 11230021 chr3L 11230081 11230119 10 95 3.0 3.0 3.0 2.5 131 chr3L 11229988 intergenic CG42671 + chr3L 11230054 intergenic CG42671 + chr3L 11230119 intergenic CG42671 + chr3L_10_11230001 chr3L_11230001 D4-c1 1372 chr3L 11241777 11241792 chr3L 11241860 11241875 6 83 1.0 2.0 1.5 2.4 98 chr3L 11241777 intergenic not near genes chr3L 11241826 intergenic not near genes chr3L 11241875 intergenic not near genes chr3L_6_11240001 chr3L_11240001 D4-c1 1373 chr3L 11245086 11245121 chr3L 11245179 11245214 15 93 6.5 4.5 5.5 2.3 128 chr3L 11245086 intergenic not near genes chr3L 11245150 intergenic not near genes chr3L 11245214 intergenic not near genes chr3L_15_11245001 chr3L_11245001 D4-c1 1374 chr3L 11259468 11259490 chr3L 11259551 11259573 7 83 2.5 5.0 3.8 1.5 105 chr3L 11259468 intergenic not near genes chr3L 11259520 intergenic not near genes chr3L 11259573 intergenic not near genes chr3L_7_11255001 chr3L_11255001 D4-c1 1375 chr3L 11264464 11264495 chr3L 11271417 11271446 17.6 19 6952 8.5 2.5 5.5 2.9 6982 chr3L 11264464 intergenic not near genes chr3L 11267955 intergenic not near genes chr3L 11271446 intergenic not near genes chr3L_19_11265001 chr3L_11265001 D4-c1 1376 chr3L 11290628 11290654 chr3L 11290952 11290978 12 324 3.0 3.5 3.2 2.9 350 chr3L 11290628 intron CG6175 - chr3L 11290803 intron CG6175 - chr3L 11290978 intron CG6175 - chr3L_12_11290001 chr3L_11290001 D4-c1 1377 chr3L 11329698 11329726 chr3L 11332896 11332932 jockey 7 3204 4.0 7.0 5.5 1.1 3234 chr3L 11329698 intergenic not near genes chr3L 11331315 intergenic not near genes chr3L 11332932 intergenic not near genes chr3L_7_11330001 chr3L_11330001 D4-c1 1378 chr3L 11389449 11389487 chr3L 11389902 11389940 23 453 4.0 3.0 3.5 5.1 491 chr3L 11389449 intergenic not near genes chr3L 11389694 intergenic not near genes chr3L 11389940 intergenic not near genes chr3L_23_11385001 chr3L_11385001 D4-c1 1379 chr3L 11476690 11476705 chr3L 11477203 11477218 8 513 4.0 2.0 3.0 2.0 528 chr3L 11476690 intergenic not near genes chr3L 11476954 intergenic not near genes chr3L 11477218 intergenic not near genes chr3L_8_11475001 chr3L_11475001 D4-c1 1380 chr3L 11488897 11488914 chr3L 11489012 11489029 7 115 1.5 1.5 1.5 2.8 132 chr3L 11488897 intron chrb + chr3L 11488963 intron chrb + chr3L 11489029 intron chrb + chr3L_7_11485001 chr3L_11485001 D4-c1 1381 chr3L 11564792 11564799 chr3L 11572418 11572425 412 4 7626 7.0 14.5 10.8 0.3 7633 chr3L 11564792 exon CG33267 + chr3L 11568608 intron CG33267 + chr3L 11572425 exon CG33267 + chr3L_4_11565001 chr3L_11565001 D4-c1 1382 chr3L 11564803 11564807 chr3L 11572411 11572433 412 5 7622 6.0 10.5 8.2 0.5 7630 chr3L 11564803 exon CG33267 + chr3L 11568618 intron CG33267 + chr3L 11572433 exon CG33267 + chr3L_5_11565001 chr3L_11565001 D4-c1 1383 chr3L 11579560 11579580 chr3L 11579667 11579687 8 107 4.5 3.0 3.8 1.7 127 chr3L 11579560 intergenic CG43390 - chr3L 11579624 intergenic CG43390 - chr3L 11579687 intergenic CG43390 - chr3L_8_11575001 chr3L_11575001 D4-c1 1384 chr3L 11580654 11580661 chr3L 11580743 11580750 6 89 0.5 2.5 1.5 2.4 96 chr3L 11580654 intergenic CG43391 - chr3L 11580702 intergenic CG43391 - chr3L 11580750 intergenic CG43391 - chr3L_6_11580001 chr3L_11580001 D4-c1 1385 chr3L 11663114 11663143 chr3L 11663292 11663321 6 178 4.0 3.5 3.8 1.2 207 chr3L 11663114 intron CG32085 - chr3L 11663218 intron CG32085 - chr3L 11663321 intron CG32085 - chr3L_6_11660001 chr3L_11660001 D4-c1 1386 chr3L 11678100 11678123 chr3L 11678188 11678211 8 88 2.0 2.5 2.2 2.5 111 chr3L 11678100 intron CG32085 - chr3L 11678156 intron CG32085 - chr3L 11678211 intron CG32085 - chr3L_8_11675001 chr3L_11675001 D4-c1 1387 chr3L 11723082 11723114 chr3L 11727877 11727910 Doc 13 4796 4.5 3.0 3.8 2.7 4828 chr3L 11723082 3` UTR Bmcp + chr3L 11725496 intron Bmcp + chr3L 11727910 3` UTR Bmcp + chr3L_13_11725001 chr3L_11725001 D4-c1 1388 chr3L 11744013 11744035 chr3L 11744122 11744144 12 109 6.5 0.0 3.2 2.9 131 chr3L 11744013 exon CG6024 - chr3L 11744078 intron CG6024 - chr3L 11744144 intron CG6024 - chr3L_12_11740001 chr3L_11740001 D4-c1 1389 chr3L 11757916 11757930 chr3L 11758014 11758027 6 98 7.5 0.0 3.8 1.2 111 chr3L 11757916 intron CG6024 - chr3L 11757972 intron CG6024 - chr3L 11758027 intron CG6024 - chr3L_6_11755001 chr3L_11755001 D4-c1 1390 chr3L 7749470 7749471 chr3L 11777678 11777678 7 4028207 16.0 29.5 22.8 0.3 4028208 chr3L 7749470 intron,3` UTR CG32373 +,CG13685 + chr3L 9763574 5` UTR CG8177 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_7_9760001 chr3L_9760001 D4-c1 1391 chr3L 11826558 11826589 chr3L 11826667 11826698 16 109 4.0 3.5 3.8 3.3 140 chr3L 11826558 intergenic CycA - chr3L 11826628 intergenic CycA - chr3L 11826698 intergenic CycA - chr3L_16_11825001 chr3L_11825001 D4-c1 1392 chr3L 11887257 11887263 chr3L 11887355 11887361 6 98 5.5 0.0 2.8 1.6 104 chr3L 11887257 intron CG44837 - chr3L 11887309 intron,3` UTR CG44837 -,CG5897 - chr3L 11887361 intron,3` UTR CG44837 -,CG5897 - chr3L_6_11885001 chr3L_11885001 D4-c1 1393 chr3L 11943492 11943521 chr3L 11943594 11943623 15 102 3.5 6.5 5.0 2.5 131 chr3L 11943492 intergenic Rpt4R +,CG5883 - chr3L 11943558 intergenic Rpt4R +,CG5883 - chr3L 11943623 intergenic CG5883 -,Rpt4R + chr3L_15_11940001 chr3L_11940001 D4-c1 1394 chr3L 11961197 11961210 chr3L 11961302 11961313 9 104 13.0 6.5 9.8 0.8 116 chr3L 11961197 exon prc - chr3L 11961255 exon prc - chr3L 11961313 exon prc - chr3L_9_11960001 chr3L_11960001 D4-c1 1395 chr3L 11961212 11961217 chr3L 11961295 11961322 8 101 11.0 5.0 8.0 0.9 110 chr3L 11961212 exon prc - chr3L 11961267 exon prc - chr3L 11961322 exon prc - chr3L_8_11960001 chr3L_11960001 D4-c1 1396 chr3L 11961954 11961958 chr3L 11964267 11964281 6 2315 26.0 1.5 13.8 0.4 2327 chr3L 11961954 exon prc - chr3L 11963118 exon prc - chr3L 11964281 exon prc - chr3L_6_11960001 chr3L_11960001 D4-c1 1397 chr3L 11998331 11998345 chr3L 11998416 11998430 4 85 5.0 4.0 4.5 0.7 99 chr3L 11998331 intergenic Pop2 -,Grip163 - chr3L 11998380 intergenic Pop2 -,Grip163 - chr3L 11998430 3` UTR Pop2 - chr3L_4_11995001 chr3L_11995001 D4-c1 1398 chr3L 12013910 12013938 chr3L 12014002 12014030 16 92 3.5 4.0 3.8 3.3 120 chr3L 12013910 intron rols - chr3L 12013970 intron rols - chr3L 12014030 intron rols - chr3L_16_12010001 chr3L_12010001 D4-c1 1399 chr3L 12089079 12089112 chr3L 12089160 12089193 20 81 5.0 6.5 5.8 2.9 114 chr3L 12089079 3` UTR CG17154 + chr3L 12089136 3` UTR CG17154 + chr3L 12089193 3` UTR CG17154 + chr3L_20_12085001 chr3L_12085001 D4-c1 1400 chr3L 12170790 12170822 chr3L 12170873 12170905 7 83 2.0 2.0 2.0 2.3 115 chr3L 12170790 intron Rh7 - chr3L 12170848 intron Rh7 - chr3L 12170905 intron Rh7 - chr3L_7_12170001 chr3L_12170001 D4-c1 1401 chr3L 12223876 12223906 chr3L 12223954 12223983 17 76 4.5 5.5 5.0 2.8 107 chr3L 12223876 intron app - chr3L 12223930 intron app - chr3L 12223983 intron app - chr3L_17_12220001 chr3L_12220001 D4-c1 1402 chr3L 12261192 12261202 chr3L 12261295 12261305 5 103 14.0 6.5 10.2 0.4 113 chr3L 12261192 intron app - chr3L 12261248 intron app - chr3L 12261305 intron app - chr3L_5_12260001 chr3L_12260001 D4-c1 1403 chr3L 12261204 12261218 chr3L 12261291 12261321 9 100 7.5 5.5 6.5 1.2 117 chr3L 12261204 intron app - chr3L 12261262 intron app - chr3L 12261321 intron app - chr3L_9_12260001 chr3L_12260001 D4-c1 1404 chr3L 12356939 12356966 chr3L 12357283 12357315 11 344 36.0 13.5 24.8 0.4 376 chr3L 12356939 intergenic not near genes chr3L 12357127 intergenic not near genes chr3L 12357315 intergenic not near genes chr3L_11_12355001 chr3L_12355001 D4-c1 1405 chr3L 12381539 12381552 chr3L 12381618 12381631 8 79 1.5 0.0 0.8 4.4 92 chr3L 12381539 intron Ncc69 - chr3L 12381585 intron Ncc69 - chr3L 12381631 intron Ncc69 - chr3L_8_12380001 chr3L_12380001 D4-c1 1406 chr3L 12412734 12412922 chr3L 12412820 12413005 13 85 4.5 3.5 4.0 2.6 271 chr3L 12412734 intron CG32103 - chr3L 12412870 intron CG32103 - chr3L 12413005 intron CG32103 - chr3L_13_12410001 chr3L_12410001 D4-c1 1407 chr3L 12446269 12446300 chr3L 12446348 12446379 12 76 3.5 3.0 3.2 2.9 110 chr3L 12446269 intergenic not near genes chr3L 12446324 intergenic not near genes chr3L 12446379 intergenic not near genes chr3L_12_12445001 chr3L_12445001 D4-c1 1408 chr3L 12539189 12539211 chr3L 12539274 12539296 11 85 3.5 3.0 3.2 2.6 107 chr3L 12539189 intron sowah - chr3L 12539242 intron sowah - chr3L 12539296 intron sowah - chr3L_11_12535001 chr3L_12535001 D4-c1 1409 chr3L 12578044 12578074 chr3L 12578133 12578160 8 88 0.5 3.0 1.8 2.9 116 chr3L 12578044 intergenic not near genes chr3L 12578102 intergenic not near genes chr3L 12578160 intergenic not near genes chr3L_8_12575001 chr3L_12575001 D4-c1 1410 chr3L 12591631 12591642 chr3L 12591709 12591720 5 78 9.5 10.0 9.8 0.5 89 chr3L 12591631 intron ara + chr3L 12591676 intron ara + chr3L 12591720 intron ara + chr3L_5_12590001 chr3L_12590001 D4-c1 1411 chr3L 12610993 12611023 chr3L 12611240 12611270 11 247 4.5 3.5 4.0 2.2 277 chr3L 12610993 intron caup + chr3L 12611132 intron caup + chr3L 12611270 intron caup + chr3L_11_12610001 chr3L_12610001 D4-c1 1412 chr3L 12620973 12620983 chr3L 12621072 12621081 10 99 10.5 9.0 9.8 0.9 108 chr3L 12620973 3` UTR caup + chr3L 12621027 3` UTR caup + chr3L 12621081 3` UTR caup + chr3L_10_12620001 chr3L_12620001 D4-c1 1413 chr3L 12626175 12626188 chr3L 12626285 12626298 5 110 4.0 0.0 2.0 1.7 123 chr3L 12626175 intergenic not near genes chr3L 12626236 intergenic not near genes chr3L 12626298 intergenic not near genes chr3L_5_12625001 chr3L_12625001 D4-c1 1414 chr3L 12631080 12631109 chr3L 12631164 12631193 14 84 3.0 7.5 5.2 2.3 113 chr3L 12631080 intron CR32111 + chr3L 12631136 intron CR32111 + chr3L 12631193 intron CR32111 + chr3L_14_12630001 chr3L_12630001 D4-c1 1415 chr3L 12631892 12631923 chr3L 12632103 12632133 11 211 2.5 2.5 2.5 3.1 241 chr3L 12631892 intron CR32111 + chr3L 12632012 intron CR32111 + chr3L 12632133 intron CR32111 + chr3L_11_12630001 chr3L_12630001 D4-c1 1416 chr3L 12657603 12657609 chr3L 12657685 12657690 6 82 7.0 3.0 5.0 1.0 87 chr3L 12657603 intergenic not near genes chr3L 12657646 intergenic not near genes chr3L 12657690 intergenic not near genes chr3L_6_12655001 chr3L_12655001 D4-c1 1417 chr3L 12799819 12799833 chr3L 12799928 12799942 5 109 7.0 4.0 5.5 0.8 123 chr3L 12799819 intron Atg1 - chr3L 12799880 intron Atg1 - chr3L 12799942 intron Atg1 - chr3L_5_12795001 chr3L_12795001 D4-c1 1418 chr3L 12801977 12802013 chr3L 12802054 12802090 12 77 5.0 3.0 4.0 2.4 113 chr3L 12801977 intron Atg1 - chr3L 12802034 intron Atg1 - chr3L 12802090 intron Atg1 - chr3L_12_12800001 chr3L_12800001 D4-c1 1419 chr3L 12829734 12829748 chr3L 12830541 12830555 9 807 10.5 0.5 5.5 1.4 821 chr3L 12829734 intron CG10960 - chr3L 12830144 intron CG10960 - chr3L 12830555 intron CG10960 - chr3L_9_12830001 chr3L_12830001 D4-c1 1420 chr3L 12869549 12869571 chr3L 12869643 12869660 10 91 2.0 5.0 3.5 2.2 111 chr3L 12869549 intergenic not near genes chr3L 12869604 intergenic not near genes chr3L 12869660 intergenic not near genes chr3L_10_12865001 chr3L_12865001 D4-c1 1421 chr3L 12874929 12874961 chr3L 12877222 12877253 jockey 16 2293 2.5 3.0 2.8 4.2 2324 chr3L 12874929 intergenic not near genes chr3L 12876091 intergenic not near genes chr3L 12877253 intergenic not near genes chr3L_16_12875001 chr3L_12875001 D4-c1 1422 chr3L 12894800 12894818 chr3L 12894879 12894897 8 79 10.0 10.5 10.2 0.7 97 chr3L 12894800 intergenic CG14118 + chr3L 12894848 intergenic CG14118 + chr3L 12894897 intergenic CG14118 + chr3L_8_12890001 chr3L_12890001 D4-c1 1423 chr3L 12919273 12919303 chr3L 12924747 12924777 Rt1c 25 5473 9.0 3.0 6.0 3.6 5504 chr3L 12919273 intergenic not near genes chr3L 12922025 intergenic not near genes chr3L 12924777 intergenic not near genes chr3L_25_12920001 chr3L_12920001 D4-c1 1424 chr3L 12957786 12957820 chr3L 12962269 12962303 copia 13 4483 3.5 5.0 4.2 2.5 4517 chr3L 12957786 intergenic not near genes chr3L 12960044 intergenic not near genes chr3L 12962303 intergenic not near genes chr3L_13_12960001 chr3L_12960001 D4-c1 1425 chr3L 12966138 12966152 chr3L 12966228 12966242 7 90 8.0 2.0 5.0 1.2 104 chr3L 12966138 intron Or69a - chr3L 12966190 intron Or69a - chr3L 12966242 intron Or69a - chr3L_7_12965001 chr3L_12965001 D4-c1 1426 chr3L 12978535 12978783 chr3L 12978620 12978861 15 81 3.0 6.0 4.5 2.7 326 chr3L 12978535 intergenic not near genes chr3L 12978698 intergenic not near genes chr3L 12978861 intergenic not near genes chr3L_15_12975001 chr3L_12975001 D4-c1 1427 chr3L 12980517 12980549 chr3L 12980606 12980638 10 89 6.0 0.0 3.0 2.5 121 chr3L 12980517 intergenic not near genes chr3L 12980578 intergenic not near genes chr3L 12980638 intergenic not near genes chr3L_10_12980001 chr3L_12980001 D4-c1 1428 chr3L 13069559 13069579 chr3L 13069639 13069659 9 80 2.5 2.5 2.5 2.6 100 chr3L 13069559 intergenic not near genes chr3L 13069609 intergenic not near genes chr3L 13069659 intergenic not near genes chr3L_9_13065001 chr3L_13065001 D4-c1 1429 chr3L 13076961 13076986 chr3L 13077173 13077198 9 212 1.5 6.0 3.8 1.9 237 chr3L 13076961 intergenic not near genes chr3L 13077080 intergenic not near genes chr3L 13077198 intergenic not near genes chr3L_9_13075001 chr3L_13075001 D4-c1 1430 chr3L 13134526 13134537 chr3L 13134613 13134624 6 87 4.0 5.5 4.8 1.0 98 chr3L 13134526 intergenic not near genes chr3L 13134575 intergenic not near genes chr3L 13134624 intergenic not near genes chr3L_6_13130001 chr3L_13130001 D4-c1 1431 chr3L 13147370 13147402 chr3L 13147448 13147480 22 77 0.0 2.5 1.2 10.0 110 chr3L 13147370 intergenic not near genes chr3L 13147425 intergenic not near genes chr3L 13147480 intergenic not near genes chr3L_22_13145001 chr3L_13145001 D4-c1 1432 chr3L 13159289 13159296 chr3L 13159369 13159376 4 79 4.5 2.0 3.2 1.0 87 chr3L 13159289 intergenic not near genes chr3L 13159332 intergenic not near genes chr3L 13159376 intergenic not near genes chr3L_4_13155001 chr3L_13155001 D4-c1 1433 chr3L 13206234 13206264 chr3L 13206316 13206347 15 83 5.0 6.0 5.5 2.3 113 chr3L 13206234 intergenic not near genes chr3L 13206290 intergenic not near genes chr3L 13206347 intergenic not near genes chr3L_15_13205001 chr3L_13205001 D4-c1 1434 chr3L 13235749 13235771 chr3L 13235829 13235856 9 84 6.5 1.5 4.0 1.8 107 chr3L 13235749 intron caps + chr3L 13235802 intron caps + chr3L 13235856 intron caps + chr3L_9_13235001 chr3L_13235001 D4-c1 1435 chr3L 13296519 13296538 chr3L 13296611 13296630 13 92 10.0 3.0 6.5 1.7 111 chr3L 13296519 intergenic Sfp70A4 -,CR45253 + chr3L 13296574 3` UTR Sfp70A4 - chr3L 13296630 3` UTR Sfp70A4 - chr3L_13_13295001 chr3L_13295001 D4-c1 1436 chr3L 13301248 13301274 chr3L 13301331 13301351 9 82 0.0 0.0 0.0 9.0 103 chr3L 13301248 intergenic SP + chr3L 13301300 intergenic SP + chr3L 13301351 intergenic SP + chr3L_9_13300001 chr3L_13300001 D4-c1 1437 chr3L 13320605 13320639 chr3L 13320697 13320729 12 92 3.5 2.5 3.0 3.0 124 chr3L 13320605 intergenic not near genes chr3L 13320667 intergenic not near genes chr3L 13320729 intergenic not near genes chr3L_12_13320001 chr3L_13320001 D4-c1 1438 chr3L 13338285 13338314 chr3L 13338381 13338411 10 96 2.0 3.5 2.8 2.6 126 chr3L 13338285 intergenic not near genes chr3L 13338348 intergenic not near genes chr3L 13338411 intergenic not near genes chr3L_10_13335001 chr3L_13335001 D4-c1 1439 chr3L 13372950 13372969 chr3L 13373039 13373058 12 89 2.0 5.5 3.8 2.5 108 chr3L 13372950 intergenic not near genes chr3L 13373004 intergenic not near genes chr3L 13373058 intergenic not near genes chr3L_12_13370001 chr3L_13370001 D4-c1 1440 chr3L 13400526 13400546 chr3L 13400603 13400623 6 77 1.0 0.5 0.8 3.3 97 chr3L 13400526 intron sens - chr3L 13400574 intron sens - chr3L 13400623 intron sens - chr3L_6_13400001 chr3L_13400001 D4-c1 1441 chr3L 13452665 13452684 chr3L 13452754 13452773 11 89 1.0 5.5 3.2 2.6 108 chr3L 13452665 intron CG10738 + chr3L 13452719 intron CG10738 + chr3L 13452773 intron CG10738 + chr3L_11_13450001 chr3L_13450001 D4-c1 1442 chr3L 13525163 13525190 chr3L 13532960 13532987 roo 7 7797 5.0 6.5 5.8 1.0 7824 chr3L 13525163 intergenic not near genes chr3L 13529075 intergenic not near genes chr3L 13532987 intergenic not near genes chr3L_7_13525001 chr3L_13525001 D4-c1 1443 chr3L 13535899 13535933 chr3L 13535976 13536010 9 77 2.5 3.0 2.8 2.4 111 chr3L 13535899 intergenic not near genes chr3L 13535954 intergenic not near genes chr3L 13536010 intergenic not near genes chr3L_9_13535001 chr3L_13535001 D4-c1 1444 chr3L 13561997 13562015 chr3L 13562092 13562110 9 95 2.5 8.0 5.2 1.5 113 chr3L 13561997 intron bru-3 - chr3L 13562054 intron bru-3 - chr3L 13562110 intron bru-3 - chr3L_9_13560001 chr3L_13560001 D4-c1 1445 chr3L 13598215 13598226 chr3L 13598293 13598302 5 77 10.0 0.5 5.2 0.8 87 chr3L 13598215 intron bru-3 - chr3L 13598258 intron bru-3 - chr3L 13598302 intron bru-3 - chr3L_5_13595001 chr3L_13595001 D4-c1 1446 chr3L 13692585 13692616 chr3L 13692662 13692694 14 77 4.0 2.5 3.2 3.3 109 chr3L 13692585 intron bru-3 - chr3L 13692640 intron bru-3 - chr3L 13692694 intron bru-3 - chr3L_14_13690001 chr3L_13690001 D4-c1 1447 chr3L 13745789 13745806 chr3L 13746422 13746439 4 633 11.0 17.5 14.2 0.3 650 chr3L 13745789 intron bru-3 - chr3L 13746114 intron bru-3 - chr3L 13746439 intron bru-3 - chr3L_4_13745001 chr3L_13745001 D4-c1 1448 chr3L 13804547 13804576 chr3L 13822834 13822863 roo 17 18287 6.0 6.0 6.0 2.4 18316 chr3L 13804547 intergenic not near genes chr3L 13813705 intergenic not near genes chr3L 13822863 intergenic not near genes chr3L_17_13810001 chr3L_13810001 D4-c1 1449 chr3L 13828688 13828720 chr3L 13828765 13828797 9 77 0.5 3.5 2.0 3.0 109 chr3L 13828688 intergenic not near genes chr3L 13828742 intergenic not near genes chr3L 13828797 intergenic not near genes chr3L_9_13825001 chr3L_13825001 D4-c1 1450 chr3L 13833763 13833792 chr3L 13833901 13833930 13 138 0.0 2.0 1.0 6.5 167 chr3L 13833763 intergenic not near genes chr3L 13833846 intergenic not near genes chr3L 13833930 intergenic not near genes chr3L_13_13830001 chr3L_13830001 D4-c1 1451 chr3L 13868100 13868127 chr3L 13868237 13868264 15 137 1.0 5.5 3.2 3.6 164 chr3L 13868100 3` UTR dysc - chr3L 13868182 3` UTR dysc - chr3L 13868264 3` UTR dysc - chr3L_15_13865001 chr3L_13865001 D4-c1 1452 chr3L 13920418 13920433 chr3L 13920499 13920514 6 81 2.5 3.5 3.0 1.5 96 chr3L 13920418 intron Rgl - chr3L 13920466 intron Rgl - chr3L 13920514 intron Rgl - chr3L_6_13920001 chr3L_13920001 D4-c1 1453 chr3L 13921395 13921407 chr3L 13921477 13921489 5 82 2.0 10.0 6.0 0.7 94 chr3L 13921395 intron Rgl - chr3L 13921442 intron Rgl - chr3L 13921489 intron Rgl - chr3L_5_13920001 chr3L_13920001 D4-c1 1454 chr3L 14004437 14004471 chr3L 14004517 14004551 12 80 4.5 1.5 3.0 3.0 114 chr3L 14004437 intron upSET + chr3L 14004494 intron upSET + chr3L 14004551 intron upSET + chr3L_12_14000001 chr3L_14000001 D4-c1 1455 chr3L 14036672 14036703 chr3L 14036766 14036797 8 94 3.0 5.0 4.0 1.6 125 chr3L 14036672 3` UTR,3` UTR pncr014:3L -,CG6661 + chr3L 14036734 3` UTR,3` UTR pncr014:3L -,CG6661 + chr3L 14036797 3` UTR pncr014:3L - chr3L_8_14035001 chr3L_14035001 D4-c1 1456 chr3L 14194727 14194738 chr3L 14194803 14194815 8 77 3.5 3.0 3.2 1.9 88 chr3L 14194727 intron nuf + chr3L 14194771 intron nuf + chr3L 14194815 intron nuf + chr3L_8_14190001 chr3L_14190001 D4-c1 1457 chr3L 14245565 14245593 chr3L 14245660 14245688 1360 15 95 7.0 4.0 5.5 2.3 123 chr3L 14245565 3` UTR CR44561 - chr3L 14245626 3` UTR CR44561 - chr3L 14245688 3` UTR CR44561 - chr3L_15_14245001 chr3L_14245001 D4-c1 1458 chr3L 14282585 14282606 chr3L 14282666 14282687 16 81 10.5 11.5 11.0 1.3 102 chr3L 14282585 intron fz + chr3L 14282636 intron fz + chr3L 14282687 intron fz + chr3L_16_14280001 chr3L_14280001 D4-c1 1459 chr3L 14286462 14286466 chr3L 14286542 14286546 7 80 11.0 4.0 7.5 0.8 84 chr3L 14286462 intron fz + chr3L 14286504 intron fz + chr3L 14286546 intron fz + chr3L_7_14285001 chr3L_14285001 D4-c1 1460 chr3L 14287311 14287347 chr3L 14287403 14287437 12 92 2.0 5.5 3.8 2.5 126 chr3L 14287311 intron fz + chr3L 14287374 intron fz + chr3L 14287437 intron fz + chr3L_12_14285001 chr3L_14285001 D4-c1 1461 chr3L 14295979 14296013 chr3L 14296466 14296500 roo 12 487 8.0 6.0 7.0 1.5 521 chr3L 14295979 intron fz + chr3L 14296240 intron fz + chr3L 14296500 intron fz + chr3L_12_14295001 chr3L_14295001 D4-c1 1462 chr3L 14312020 14312058 chr3L 14316835 14316873 X-element 10 4812 1.5 1.5 1.5 4.0 4853 chr3L 14312020 exon fz + chr3L 14314446 intron fz + chr3L 14316873 intron fz + chr3L_10_14310001 chr3L_14310001 D4-c1 1463 chr3L 14331457 14331490 chr3L 14331541 14331574 9 84 3.0 5.5 4.2 1.7 117 chr3L 14331457 intron fz + chr3L 14331516 intron fz + chr3L 14331574 intron fz + chr3L_9_14330001 chr3L_14330001 D4-c1 1464 chr3L 14338297 14338323 chr3L 14338394 14338420 6 97 2.5 2.0 2.2 1.9 123 chr3L 14338297 intron fz + chr3L 14338358 intron fz + chr3L 14338420 intron fz + chr3L_6_14335001 chr3L_14335001 D4-c1 1465 chr3L 14429437 14429462 chr3L 14429514 14429539 15 77 5.0 7.5 6.2 2.1 102 chr3L 14429437 intron bbg - chr3L 14429488 intron bbg - chr3L 14429539 intron bbg - chr3L_15_14425001 chr3L_14425001 D4-c1 1466 chr3L 14437877 14437914 chr3L 14437972 14438008 15 95 3.0 3.5 3.2 3.6 131 chr3L 14437877 intron bbg - chr3L 14437942 intron bbg - chr3L 14438008 intron bbg - chr3L_15_14435001 chr3L_14435001 D4-c1 1467 chr3L 14462896 14462903 chr3L 14462985 14462992 5 89 0.0 4.5 2.2 1.6 96 chr3L 14462896 intron bbg - chr3L 14462944 intron bbg - chr3L 14462992 intron bbg - chr3L_5_14460001 chr3L_14460001 D4-c1 1468 chr3L 14468447 14468476 chr3L 14473654 14473683 copia 13 5207 2.0 5.0 3.5 2.9 5236 chr3L 14468447 intron bbg - chr3L 14471065 intron bbg - chr3L 14473683 intron bbg - chr3L_13_14470001 chr3L_14470001 D4-c1 1469 chr3L 14487617 14487624 chr3L 14487694 14487701 4 77 11.0 0.0 5.5 0.6 84 chr3L 14487617 intron bbg - chr3L 14487659 intron bbg - chr3L 14487701 intron bbg - chr3L_4_14485001 chr3L_14485001 D4-c1 1470 chr3L 14522099 14522112 chr3L 14522199 14522212 10 100 3.5 5.0 4.2 1.9 113 chr3L 14522099 intron bbg - chr3L 14522156 intron bbg - chr3L 14522212 intron bbg - chr3L_10_14520001 chr3L_14520001 D4-c1 1471 chr3L 14546810 14546816 chr3L 14546912 14546918 6 102 0.5 4.0 2.2 1.9 108 chr3L 14546810 intron CG9238 - chr3L 14546864 intron CG9238 - chr3L 14546918 intron CG9238 - chr3L_6_14545001 chr3L_14545001 D4-c1 1472 chr3L 14565742 14565777 chr3L 14565834 14565869 13 92 2.5 1.5 2.0 4.3 127 chr3L 14565742 intergenic not near genes chr3L 14565806 intergenic not near genes chr3L 14565869 intergenic not near genes chr3L_13_14565001 chr3L_14565001 D4-c1 1473 chr3L 14578435 14578440 chr3L 14578566 14578569 4 130 2.5 3.0 2.8 1.1 134 chr3L 14578435 intergenic not near genes chr3L 14578502 intergenic not near genes chr3L 14578569 intergenic not near genes chr3L_4_14575001 chr3L_14575001 D4-c1 1474 chr3L 14591080 14591108 chr3L 14591162 14591190 13 82 6.0 5.0 5.5 2.0 110 chr3L 14591080 intron HGTX - chr3L 14591135 intron HGTX - chr3L 14591190 intron HGTX - chr3L_13_14590001 chr3L_14590001 D4-c1 1475 chr3L 14618403 14618418 chr3L 14618619 14618634 10 216 6.5 3.5 5.0 1.7 231 chr3L 14618403 intron shd + chr3L 14618518 intron shd + chr3L 14618634 intron shd + chr3L_10_14615001 chr3L_14615001 D4-c1 1476 chr3L 14721183 14721210 chr3L 14723027 14723041 Rt1c 7 1842 5.0 7.5 6.2 1.0 1858 chr3L 14721183 intron ome + chr3L 14722112 intron ome + chr3L 14723041 intron ome + chr3L_7_14720001 chr3L_14720001 D4-c1 1477 chr3L 14725589 14725616 chr3L 14728584 14728611 Doc 4 2995 3.0 3.0 3.0 1.0 3022 chr3L 14725589 intron ome + chr3L 14727100 intron ome + chr3L 14728611 intron ome + chr3L_4_14725001 chr3L_14725001 D4-c1 1478 chr3L 14729513 14729544 chr3L 14729627 14729658 11 114 6.0 0.0 3.0 2.8 145 chr3L 14729513 intron ome + chr3L 14729586 intron ome + chr3L 14729658 intron ome + chr3L_11_14725001 chr3L_14725001 D4-c1 1479 chr3L 14731322 14731350 chr3L 14731741 14731769 18 419 2.5 6.0 4.2 3.5 447 chr3L 14731322 intron ome + chr3L 14731546 intron ome + chr3L 14731769 intron ome + chr3L_18_14730001 chr3L_14730001 D4-c1 1480 chr3L 14731787 14731818 chr3L 14732290 14732321 12 500 3.0 4.0 3.5 2.7 534 chr3L 14731787 intron ome + chr3L 14732054 intron ome + chr3L 14732321 intron ome + chr3L_12_14730001 chr3L_14730001 D4-c1 1481 chr3L 14839037 14839046 chr3L 14839127 14839136 6 90 1.0 4.0 2.5 1.7 99 chr3L 14839037 intron CG17839 + chr3L 14839086 intron CG17839 + chr3L 14839136 intron CG17839 + chr3L_6_14835001 chr3L_14835001 D4-c1 1482 chr3L 14861800 14861833 chr3L 14861881 14861914 19 81 3.0 5.5 4.2 3.7 114 chr3L 14861800 intron CG17839 + chr3L 14861857 intron CG17839 + chr3L 14861914 intron CG17839 + chr3L_19_14860001 chr3L_14860001 D4-c1 1483 chr3L 14922102 14922117 chr3L 14922211 14922226 8 108 9.0 3.5 6.2 1.1 124 chr3L 14922102 intron DCX-EMAP + chr3L 14922164 intron DCX-EMAP + chr3L 14922226 intron DCX-EMAP + chr3L_8_14920001 chr3L_14920001 D4-c1 1484 chr3L 14933447 14933459 chr3L 14933530 14933542 5 83 1.0 5.5 3.2 1.2 95 chr3L 14933447 intron DCX-EMAP + chr3L 14933494 intron DCX-EMAP + chr3L 14933542 intron DCX-EMAP + chr3L_5_14930001 chr3L_14930001 D4-c1 1485 chr3L 14962257 14962270 chr3L 14962559 14962572 6 302 6.5 1.5 4.0 1.2 315 chr3L 14962257 intergenic not near genes chr3L 14962414 intergenic not near genes chr3L 14962572 intergenic not near genes chr3L_6_14960001 chr3L_14960001 D4-c1 1486 chr3L 15069790 15069795 chr3L 15069931 15069947 37 147 27.5 123.0 75.2 0.5 157 chr3L 15069790 exon cp309 - chr3L 15069868 intron cp309 - chr3L 15069947 exon cp309 - chr3L_37_15065001 chr3L_15065001 D4-c1 1487 chr3L 15069796 15069814 chr3L 15069930 15069940 144 141 22.5 106.5 64.5 2.2 144 chr3L 15069796 exon cp309 - chr3L 15069868 intron cp309 - chr3L 15069940 exon cp309 - chr3L_144_15065001 chr3L_15065001 D4-c1 1488 chr3L 15085056 15085081 chr3L 15086223 15086238 1360 10 1165 3.0 3.0 3.0 2.5 1182 chr3L 15085056 intron cp309 - chr3L 15085647 intron cp309 - chr3L 15086238 intron cp309 - chr3L_10_15085001 chr3L_15085001 D4-c1 1489 chr3L 15151215 15151238 chr3L 15151400 15151423 11 185 5.0 3.0 4.0 2.2 208 chr3L 15151215 intron FucTA + chr3L 15151319 intron FucTA + chr3L 15151423 intron FucTA + chr3L_11_15150001 chr3L_15150001 D4-c1 1490 chr3L 15165027 15165046 chr3L 15165127 15165146 6 100 0.0 0.0 0.0 6.0 119 chr3L 15165027 intergenic not near genes chr3L 15165086 intergenic not near genes chr3L 15165146 intergenic not near genes chr3L_6_15165001 chr3L_15165001 D4-c1 1491 chr3L 15209063 15209093 chr3L 15209150 15209180 7 87 4.5 1.0 2.8 1.8 117 chr3L 15209063 intergenic CG6888 + chr3L 15209122 intergenic not near genes chr3L 15209180 intergenic not near genes chr3L_7_15205001 chr3L_15205001 D4-c1 1492 chr3L 15295767 15295801 chr3L 15298611 15298645 gypsy5 12 2844 3.0 9.5 6.2 1.7 2878 chr3L 15295767 intergenic not near genes chr3L 15297206 intergenic not near genes chr3L 15298645 intergenic Best4 + chr3L_12_15295001 chr3L_15295001 D4-c1 1493 chr3L 15384957 15384988 chr3L 15385086 15385117 12 129 4.0 4.5 4.2 2.3 160 chr3L 15384957 intergenic not near genes chr3L 15385037 intergenic not near genes chr3L 15385117 intergenic not near genes chr3L_12_15385001 chr3L_15385001 D4-c1 1494 chr3L 15423758 15423784 chr3L 15426603 15426629 opus 5 2845 4.5 3.5 4.0 1.0 2871 chr3L 15423758 intergenic not near genes chr3L 15425194 intergenic not near genes chr3L 15426629 intergenic not near genes chr3L_5_15425001 chr3L_15425001 D4-c1 1495 chr3L 15436088 15436118 chr3L 15436203 15436233 11 115 5.0 3.0 4.0 2.2 145 chr3L 15436088 intergenic not near genes chr3L 15436160 intergenic not near genes chr3L 15436233 intergenic not near genes chr3L_11_15435001 chr3L_15435001 D4-c1 1496 chr3L 15541617 15541651 chr3L 15541709 15541743 9 91 3.0 3.0 3.0 2.2 126 chr3L 15541617 intron CrebA + chr3L 15541680 intron CrebA + chr3L 15541743 intron CrebA + chr3L_9_15540001 chr3L_15540001 D4-c1 1497 chr3L 15554922 15554951 chr3L 15556710 15556739 S-element 11 1788 8.5 3.5 6.0 1.6 1817 chr3L 15554922 intron AGO2 + chr3L 15555830 intron AGO2 + chr3L 15556739 intron AGO2 + chr3L_11_15555001 chr3L_15555001 D4-c1 1498 chr3L 15591619 15591651 chr3L 15591775 15591807 14 156 4.5 3.5 4.0 2.8 188 chr3L 15591619 intron RhoGAP71E + chr3L 15591713 intron RhoGAP71E + chr3L 15591807 intron RhoGAP71E + chr3L_14_15590001 chr3L_15590001 D4-c1 1499 chr3L 15633183 15633199 chr3L 15633264 15633280 6 81 3.5 0.0 1.8 2.1 97 chr3L 15633183 intron comm3 - chr3L 15633232 intron comm3 - chr3L 15633280 intron comm3 - chr3L_6_15630001 chr3L_15630001 D4-c1 1500 chr3L 15641807 15641814 chr3L 15641893 15641900 5 86 0.0 3.0 1.5 2.0 93 chr3L 15641807 intron comm3 - chr3L 15641854 intron comm3 - chr3L 15641900 intron comm3 - chr3L_5_15640001 chr3L_15640001 D4-c1 1501 chr3L 15679384 15679416 chr3L 15679545 15679577 7 161 1.5 1.0 1.2 3.2 193 chr3L 15679384 intergenic CG7304 + chr3L 15679480 intergenic CG7304 + chr3L 15679577 intergenic CG7304 + chr3L_7_15675001 chr3L_15675001 D4-c1 1502 chr3L 15691414 15691447 chr3L 15691497 15691530 9 79 2.0 4.0 3.0 2.2 116 chr3L 15691414 intron CG34451 - chr3L 15691472 intron CG34451 - chr3L 15691530 intron CG34451 - chr3L_9_15690001 chr3L_15690001 D4-c1 1503 chr3L 15742959 15742990 chr3L 15743121 15743151 9 161 5.0 0.0 2.5 2.6 192 chr3L 15742959 intergenic not near genes chr3L 15743055 intergenic not near genes chr3L 15743151 intergenic not near genes chr3L_9_15740001 chr3L_15740001 D4-c1 1504 chr3L 15760686 15760715 chr3L 15760772 15760799 4 85 3.5 2.0 2.8 1.1 113 chr3L 15760686 intergenic not near genes chr3L 15760742 intergenic not near genes chr3L 15760799 intergenic not near genes chr3L_4_15760001 chr3L_15760001 D4-c1 1505 chr3L 15769409 15769444 chr3L 15769491 15769519 15 80 2.0 7.5 4.8 2.6 110 chr3L 15769409 intergenic not near genes chr3L 15769464 intergenic not near genes chr3L 15769519 intergenic not near genes chr3L_15_15765001 chr3L_15765001 D4-c1 1506 chr3L 15883187 15883222 chr3L 15883481 15883516 17 294 3.0 6.0 4.5 3.1 329 chr3L 15883187 intron pHCl - chr3L 15883352 intron pHCl - chr3L 15883516 intron pHCl - chr3L_17_15880001 chr3L_15880001 D4-c1 1507 chr3L 15887286 15887301 chr3L 15887363 15887370 4 75 2.0 2.5 2.2 1.2 84 chr3L 15887286 intron pHCl - chr3L 15887328 intron pHCl - chr3L 15887370 intron pHCl - chr3L_4_15885001 chr3L_15885001 D4-c1 1508 chr3L 15889059 15889094 chr3L 15889258 15889293 10 198 2.5 4.0 3.2 2.4 234 chr3L 15889059 intron pHCl - chr3L 15889176 intron pHCl - chr3L 15889293 intron pHCl - chr3L_10_15885001 chr3L_15885001 D4-c1 1509 chr3L 15897060 15897087 chr3L 15897182 15897209 12 121 6.0 4.5 5.2 1.9 149 chr3L 15897060 intron pHCl - chr3L 15897134 intron pHCl - chr3L 15897209 intron pHCl - chr3L_12_15895001 chr3L_15895001 D4-c1 1510 chr3L 15899222 15899258 chr3L 15899790 15899819 jockey 15 567 3.0 5.5 4.2 2.9 597 chr3L 15899222 intergenic pHCl - chr3L 15899520 intergenic pHCl - chr3L 15899819 intergenic sff - chr3L_15_15895001 chr3L_15895001 D4-c1 1511 chr3L 15929219 15929229 chr3L 15938367 15938377 roo 4 9148 0.0 5.0 2.5 1.1 9158 chr3L 15929219 intron Pka-C3 - chr3L 15933798 intron Pka-C3 - chr3L 15938377 intron Pka-C3 - chr3L_4_15930001 chr3L_15930001 D4-c1 1512 chr3L 15939848 15939883 chr3L 15939925 15939960 14 77 4.5 3.5 4.0 2.8 112 chr3L 15939848 intron Pka-C3 - chr3L 15939904 intron Pka-C3 - chr3L 15939960 intron Pka-C3 - chr3L_14_15935001 chr3L_15935001 D4-c1 1513 chr3L 15968219 15968243 chr3L 15968303 15968327 14 83 7.0 3.5 5.2 2.3 108 chr3L 15968219 5` UTR CG10516 + chr3L 15968273 5` UTR CG10516 + chr3L 15968327 5` UTR CG10516 + chr3L_14_15965001 chr3L_15965001 D4-c1 1514 chr3L 16027240 16027277 chr3L 16027329 16027366 7 89 3.0 3.0 3.0 1.8 126 chr3L 16027240 intron Notum + chr3L 16027303 intron Notum + chr3L 16027366 intron Notum + chr3L_7_16025001 chr3L_16025001 D4-c1 1515 chr3L 16040392 16040413 chr3L 16040487 16040508 13 95 2.0 6.0 4.0 2.6 116 chr3L 16040392 intron th - chr3L 16040450 intron th - chr3L 16040508 intron th - chr3L_13_16040001 chr3L_16040001 D4-c1 1516 chr3L 16162596 16162630 chr3L 16162681 16162715 14 85 3.0 2.5 2.8 3.7 119 chr3L 16162596 intron CG5151 - chr3L 16162656 intron CG5151 - chr3L 16162715 intron CG5151 - chr3L_14_16160001 chr3L_16160001 D4-c1 1517 chr3L 16184103 16184139 chr3L 16188923 16188959 X-element 12 4820 4.0 1.0 2.5 3.4 4856 chr3L 16184103 intergenic not near genes chr3L 16186531 intergenic not near genes chr3L 16188959 intergenic not near genes chr3L_12_16185001 chr3L_16185001 D4-c1 1518 chr3L 16212809 16212836 chr3L 16212901 16212928 8 92 5.5 0.5 3.0 2.0 119 chr3L 16212809 intergenic CG13073 - chr3L 16212868 intergenic CG13073 - chr3L 16212928 intergenic CG13073 - chr3L_8_16210001 chr3L_16210001 D4-c1 1519 chr3L 16240770 16240777 chr3L 16240902 16240908 4 132 0.0 7.5 3.8 0.8 138 chr3L 16240770 intergenic not near genes chr3L 16240839 intergenic not near genes chr3L 16240908 intergenic not near genes chr3L_4_16240001 chr3L_16240001 D4-c1 1520 chr3L 16340262 16340289 chr3L 16340387 16340414 8 125 3.5 7.5 5.5 1.2 152 chr3L 16340262 intron CG4998 + chr3L 16340338 intron CG4998 + chr3L 16340414 intron CG4998 + chr3L_8_16340001 chr3L_16340001 D4-c1 1521 chr3L 16366767 16366799 chr3L 16366911 16366943 22 143 2.5 6.0 4.2 4.2 176 chr3L 16366767 exon Cpr72Ec - chr3L 16366855 exon Cpr72Ec - chr3L 16366943 exon Cpr72Ec - chr3L_22_16365001 chr3L_16365001 D4-c1 1522 chr3L 16443852 16443878 chr3L 16446193 16446219 Doc 8 2341 4.0 5.0 4.5 1.5 2367 chr3L 16443852 intron,intron CG33158 +,dsx-c73A - chr3L 16445036 intron,intron CG33158 +,dsx-c73A - chr3L 16446219 intron,intron CG33158 +,dsx-c73A - chr3L_8_16445001 chr3L_16445001 D4-c1 1523 chr3L 16493974 16494012 chr3L 16494492 16494530 jockey 21 518 5.0 9.0 7.0 2.6 556 chr3L 16493974 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494252 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494530 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_21_16490001 chr3L_16490001 D4-c1 1524 chr3L 16514545 16514561 chr3L 16514667 16514683 4 122 3.5 2.5 3.0 1.0 138 chr3L 16514545 intron CG43373 - chr3L 16514614 intron CG43373 - chr3L 16514683 intron CG43373 - chr3L_4_16510001 chr3L_16510001 D4-c1 1525 chr3L 16533570 16533586 chr3L 16533682 16533698 6 112 1.5 4.5 3.0 1.5 128 chr3L 16533570 intron CG43373 - chr3L 16533634 intron CG43373 - chr3L 16533698 intron CG43373 - chr3L_6_16530001 chr3L_16530001 D4-c1 1526 chr3L 16550052 16550084 chr3L 16550178 16550210 12 124 6.0 6.0 6.0 1.7 158 chr3L 16550052 intergenic not near genes chr3L 16550131 intergenic not near genes chr3L 16550210 intergenic not near genes chr3L_12_16550001 chr3L_16550001 D4-c1 1527 chr3L 16560300 16560332 chr3L 16560386 16560418 17 83 9.0 3.0 6.0 2.4 118 chr3L 16560300 intergenic not near genes chr3L 16560359 intergenic not near genes chr3L 16560418 intergenic not near genes chr3L_17_16560001 chr3L_16560001 D4-c1 1528 chr3L 16581764 16581797 chr3L 16582129 16582155 19 365 4.0 5.0 4.5 3.5 391 chr3L 16581764 5` UTR CR43727 + chr3L 16581960 5` UTR CR43727 + chr3L 16582155 5` UTR CR43727 + chr3L_19_16580001 chr3L_16580001 D4-c1 1529 chr3L 16616507 16616534 chr3L 16621836 16621863 297 7 5329 3.0 2.0 2.5 2.0 5356 chr3L 16616507 3` UTR Abl - chr3L 16619185 3` UTR Abl - chr3L 16621863 3` UTR Abl - chr3L_7_16615001 chr3L_16615001 D4-c1 1530 chr3L 16632230 16632260 chr3L 16632417 16632447 8 185 4.0 0.0 2.0 2.7 217 chr3L 16632230 intron Abl - chr3L 16632338 intron Abl - chr3L 16632447 intron Abl - chr3L_8_16630001 chr3L_16630001 D4-c1 1531 chr3L 16684028 16684042 chr3L 16689260 16689274 copia 4 5232 4.0 4.5 4.2 0.8 5246 chr3L 16684028 intron,intron Lasp -,CG43954 - chr3L 16686651 intron,intron Lasp -,CG43954 - chr3L 16689274 intron,intron,5` UTR Lasp -,CG43954 -,CR45179 + chr3L_4_16685001 chr3L_16685001 D4-c1 1532 chr3L 16749203 16749235 chr3L 16749279 16749312 13 77 5.0 1.0 3.0 3.2 109 chr3L 16749203 intergenic not near genes chr3L 16749258 intergenic not near genes chr3L 16749312 intergenic not near genes chr3L_13_16745001 chr3L_16745001 D4-c1 1533 chr3L 16757640 16757663 chr3L 16757731 16757754 7 91 4.5 3.5 4.0 1.4 114 chr3L 16757640 intergenic not near genes chr3L 16757697 intergenic not near genes chr3L 16757754 intergenic not near genes chr3L_7_16755001 chr3L_16755001 D4-c1 1534 chr3L 16770472 16770479 chr3L 16770560 16770567 4 88 1.5 1.5 1.5 1.6 95 chr3L 16770472 intron Nrt + chr3L 16770520 intron Nrt + chr3L 16770567 intron Nrt + chr3L_4_16770001 chr3L_16770001 D4-c1 1535 chr3L 16817876 16817909 chr3L 16818014 16818050 26 140 1.5 5.5 3.5 5.8 174 chr3L 16817876 intron,intron nudC +,CG13024 - chr3L 16817963 intron,intron nudC +,CG13024 - chr3L 16818050 intron,intron nudC +,CG13024 - chr3L_26_16815001 chr3L_16815001 D4-c1 1536 chr3L 16869575 16869607 chr3L 16869659 16869691 7 84 2.5 1.5 2.0 2.3 116 chr3L 16869575 intron Lmpt + chr3L 16869633 intron Lmpt + chr3L 16869691 intron Lmpt + chr3L_7_16865001 chr3L_16865001 D4-c1 1537 chr3L 16913658 16913668 chr3L 16913747 16913757 7 89 2.5 0.0 1.2 3.2 99 chr3L 16913658 intron Lmpt + chr3L 16913708 intron Lmpt + chr3L 16913757 intron Lmpt + chr3L_7_16910001 chr3L_16910001 D4-c1 1538 chr3L 16941400 16941432 chr3L 16941502 16941534 7 101 2.5 0.0 1.2 3.2 134 chr3L 16941400 intron Cpr73D - chr3L 16941467 intron Cpr73D - chr3L 16941534 intron Cpr73D - chr3L_7_16940001 chr3L_16940001 D4-c1 1539 chr3L 16945725 16945759 chr3L 16954879 16954913 roo 24 9152 4.0 8.5 6.2 3.3 9188 chr3L 16945725 exon Obp73a + chr3L 16950319 intergenic not near genes chr3L 16954913 5` UTR Nc73EF + chr3L_24_16950001 chr3L_16950001 D4-c1 1540 chr3L 17085002 17085036 chr3L 17094152 17094186 roo 16 9150 6.5 5.0 5.8 2.4 9184 chr3L 17085002 intron Rbp6 - chr3L 17089594 intron Rbp6 - chr3L 17094186 intron Rbp6 - chr3L_16_17085001 chr3L_17085001 D4-c1 1541 chr3L 17117100 17117132 chr3L 17117186 17117218 13 86 3.0 7.0 5.0 2.2 118 chr3L 17117100 intron Rbp6 - chr3L 17117159 intron Rbp6 - chr3L 17117218 intron Rbp6 - chr3L_13_17115001 chr3L_17115001 D4-c1 1542 chr3L 17120658 17120678 chr3L 17120735 17120755 8 77 3.0 6.0 4.5 1.5 97 chr3L 17120658 intron Rbp6 - chr3L 17120706 intron Rbp6 - chr3L 17120755 intron Rbp6 - chr3L_8_17120001 chr3L_17120001 D4-c1 1543 chr3L 17149163 17149182 chr3L 17149245 17149264 12 82 10.5 0.0 5.2 1.9 101 chr3L 17149163 intron Rbp6 - chr3L 17149214 intron Rbp6 - chr3L 17149264 intron Rbp6 - chr3L_12_17145001 chr3L_17145001 D4-c1 1544 chr3L 17150176 17150199 chr3L 17161507 17161530 11 11329 0.5 6.5 3.5 2.4 11354 chr3L 17150176 intron Rbp6 - chr3L 17155853 intron Rbp6 - chr3L 17161530 intron Rbp6 - chr3L_11_17155001 chr3L_17155001 D4-c1 1545 chr3L 17247520 17247534 chr3L 17248973 17248987 9 1453 3.5 32.5 18.0 0.5 1467 chr3L 17247520 intron CR43870 + chr3L 17248254 intron CR43870 + chr3L 17248987 intron CR43870 + chr3L_9_17245001 chr3L_17245001 D4-c1 1546 chr3L 17247571 17247588 chr3L 17249069 17249086 6 1499 2.5 34.0 18.2 0.3 1515 chr3L 17247571 intron CR43870 + chr3L 17248328 intron CR43870 + chr3L 17249086 intron CR43870 + chr3L_6_17245001 chr3L_17245001 D4-c1 1547 chr3L 17272242 17272266 chr3L 17272375 17272400 11 134 3.5 8.0 5.8 1.6 158 chr3L 17272242 intergenic not near genes chr3L 17272321 intergenic not near genes chr3L 17272400 intergenic not near genes chr3L_11_17270001 chr3L_17270001 D4-c1 1548 chr3L 17320883 17320911 chr3L 17320971 17320999 6 88 6.5 5.5 6.0 0.9 116 chr3L 17320883 intergenic CG6485 - chr3L 17320941 intergenic CG6485 - chr3L 17320999 intergenic CG6485 - chr3L_6_17320001 chr3L_17320001 D4-c1 1549 chr3L 17331061 17331093 chr3L 17331152 17331184 9 91 2.0 2.0 2.0 3.0 123 chr3L 17331061 intergenic not near genes chr3L 17331122 intergenic not near genes chr3L 17331184 intergenic not near genes chr3L_9_17330001 chr3L_17330001 D4-c1 1550 chr3L 17367437 17367459 chr3L 17367532 17367554 8 95 3.5 3.5 3.5 1.8 117 chr3L 17367437 intergenic CR45688 +,Cad74A - chr3L 17367496 intergenic CR45688 +,Cad74A - chr3L 17367554 intergenic CR45688 +,Cad74A - chr3L_8_17365001 chr3L_17365001 D4-c1 1551 chr3L 17408914 17408928 chr3L 17408991 17409005 7 77 6.5 2.0 4.2 1.3 91 chr3L 17408914 intron blot - chr3L 17408960 intron blot - chr3L 17409005 intron blot - chr3L_7_17405001 chr3L_17405001 D4-c1 1552 chr3L 17495229 17495259 chr3L 17495345 17495375 17 116 3.0 2.5 2.8 4.5 146 chr3L 17495229 intron,exon Oatp74D +,edin + chr3L 17495302 intron Oatp74D + chr3L 17495375 intron Oatp74D + chr3L_17_17495001 chr3L_17495001 D4-c1 1553 chr3L 17498101 17498113 chr3L 17498179 17498191 9 78 5.5 3.5 4.5 1.6 90 chr3L 17498101 intron Oatp74D + chr3L 17498146 intron Oatp74D + chr3L 17498191 intron Oatp74D + chr3L_9_17495001 chr3L_17495001 D4-c1 1554 chr3L 17510745 17510764 chr3L 17510830 17510849 12 85 5.0 8.5 6.8 1.5 104 chr3L 17510745 exon Oatp74D + chr3L 17510797 intron Oatp74D + chr3L 17510849 intron Oatp74D + chr3L_12_17510001 chr3L_17510001 D4-c1 1555 chr3L 17516978 17517013 chr3L 17524537 17524572 412 14 7559 3.0 5.0 4.0 2.8 7594 chr3L 17516978 intron CG7564 + chr3L 17520775 intron CG7564 + chr3L 17524572 3` UTR CG7564 + chr3L_14_17520001 chr3L_17520001 D4-c1 1556 chr3L 17535814 17535845 chr3L 17535929 17535944 15 113 4.5 4.5 4.5 2.7 130 chr3L 17535814 intron Nedd4 + chr3L 17535879 intron Nedd4 + chr3L 17535944 intron Nedd4 + chr3L_15_17535001 chr3L_17535001 D4-c1 1557 chr3L 17580584 17580609 chr3L 17580761 17580786 10 177 3.0 0.0 1.5 4.0 202 chr3L 17580584 intron Eip74EF - chr3L 17580685 intron Eip74EF - chr3L 17580786 intron Eip74EF - chr3L_10_17580001 chr3L_17580001 D4-c1 1558 chr3L 17592806 17592819 chr3L 17592898 17592911 8 92 1.5 3.5 2.5 2.3 105 chr3L 17592806 intron Eip74EF - chr3L 17592858 intron Eip74EF - chr3L 17592911 intron Eip74EF - chr3L_8_17590001 chr3L_17590001 D4-c1 1559 chr3L 17662984 17662988 chr3L 17663063 17663069 4 80 18.0 17.5 17.8 0.2 85 chr3L 17662984 exon Crtc - chr3L 17663026 exon Crtc - chr3L 17663069 exon Crtc - chr3L_4_17660001 chr3L_17660001 D4-c1 1560 chr3L 17690877 17690885 chr3L 17690955 17690963 4 78 0.0 5.0 2.5 1.1 86 chr3L 17690877 intron Ccn + chr3L 17690920 intron Ccn + chr3L 17690963 intron Ccn + chr3L_4_17690001 chr3L_17690001 D4-c1 1561 chr3L 17730850 17730878 chr3L 17738181 17738209 mdg1 11 7331 3.5 4.5 4.0 2.2 7359 chr3L 17730850 intron Ccn + chr3L 17734530 intron Ccn + chr3L 17738209 intron Ccn + chr3L_11_17730001 chr3L_17730001 D4-c1 1562 chr3L 17746497 17746528 chr3L 17746575 17746606 11 77 1.5 3.0 2.2 3.4 109 chr3L 17746497 intron,exon Ccn +,CG6034 - chr3L 17746552 intron,exon Ccn +,CG6034 - chr3L 17746606 intron,exon Ccn +,CG6034 - chr3L_11_17745001 chr3L_17745001 D4-c1 1563 chr3L 17772441 17772472 chr3L 17772528 17772559 11 85 3.0 5.5 4.2 2.1 118 chr3L 17772441 intergenic not near genes chr3L 17772500 intergenic not near genes chr3L 17772559 intergenic not near genes chr3L_11_17770001 chr3L_17770001 D4-c1 1564 chr3L 17789840 17789875 chr3L 17789917 17789952 7 77 3.0 1.5 2.2 2.2 112 chr3L 17789840 intergenic not near genes chr3L 17789896 intergenic not near genes chr3L 17789952 intergenic not near genes chr3L_7_17785001 chr3L_17785001 D4-c1 1565 chr3L 17790602 17790636 chr3L 17790868 17790902 9 266 5.0 2.5 3.8 1.9 300 chr3L 17790602 intergenic CG42815 - chr3L 17790752 intergenic CG42815 - chr3L 17790902 intergenic CG42815 - chr3L_9_17790001 chr3L_17790001 D4-c1 1566 chr3L 17799811 17799840 chr3L 17801598 17801628 S-element 16 1788 4.0 2.0 3.0 4.0 1817 chr3L 17799811 intron NUCB1 - chr3L 17800720 intron NUCB1 - chr3L 17801628 intron NUCB1 - chr3L_16_17800001 chr3L_17800001 D4-c1 1567 chr3L 17834322 17834356 chr3L 17834487 17834521 6 165 3.5 2.5 3.0 1.5 199 chr3L 17834322 intron Grd + chr3L 17834422 intron Grd + chr3L 17834521 intron Grd + chr3L_6_17830001 chr3L_17830001 D4-c1 1568 chr3L 17837623 17837654 chr3L 17837712 17837743 20 88 4.0 7.5 5.8 2.9 120 chr3L 17837623 exon Grd + chr3L 17837683 intron Grd + chr3L 17837743 exon Grd + chr3L_20_17835001 chr3L_17835001 D4-c1 1569 chr3L 17918374 17918405 chr3L 17921178 17921209 opus 8 2804 3.5 2.5 3.0 2.0 2835 chr3L 17918374 intergenic not near genes chr3L 17919792 intergenic not near genes chr3L 17921209 intergenic not near genes chr3L_8_17915001 chr3L_17915001 D4-c1 1570 chr3L 18013981 18013989 chr3L 18014071 18014079 6 90 0.5 0.0 0.2 5.0 98 chr3L 18013981 intron Eip75B - chr3L 18014030 intron Eip75B - chr3L 18014079 intron Eip75B - chr3L_6_18010001 chr3L_18010001 D4-c1 1571 chr3L 18029957 18029982 chr3L 18030035 18030060 9 78 5.5 0.0 2.8 2.4 103 chr3L 18029957 intron Eip75B - chr3L 18030008 intron Eip75B - chr3L 18030060 intron Eip75B - chr3L_9_18030001 chr3L_18030001 D4-c1 1572 chr3L 18042241 18042507 chr3L 18042320 18042586 12 79 2.5 3.0 2.8 3.2 345 chr3L 18042241 intron Eip75B - chr3L 18042414 intron Eip75B - chr3L 18042586 intron Eip75B - chr3L_12_18040001 chr3L_18040001 D4-c1 1573 chr3L 18047704 18047738 chr3L 18056762 18056796 roo 8 9058 2.0 2.0 2.0 2.7 9092 chr3L 18047704 intron Eip75B - chr3L 18052250 intron Eip75B - chr3L 18056796 intron Eip75B - chr3L_8_18050001 chr3L_18050001 D4-c1 1574 chr3L 18057974 18058012 chr3L 18058076 18058114 10 102 2.0 3.5 2.8 2.6 140 chr3L 18057974 intron Eip75B - chr3L 18058044 intron Eip75B - chr3L 18058114 intron Eip75B - chr3L_10_18055001 chr3L_18055001 D4-c1 1575 chr3L 18118214 18118240 chr3L 18118293 18118319 10 77 3.0 2.5 2.8 2.6 105 chr3L 18118214 3` UTR,intron CG32195 +,CG7341 + chr3L 18118266 3` UTR,intron CG32195 +,CG7341 + chr3L 18118319 3` UTR,intron CG32195 +,CG7341 + chr3L_10_18115001 chr3L_18115001 D4-c1 1576 chr3L 18119664 18119678 chr3L 18119763 18119777 7 99 0.0 7.5 3.8 1.5 113 chr3L 18119664 intron CG7341 + chr3L 18119720 intron CG7341 + chr3L 18119777 intron CG7341 + chr3L_7_18115001 chr3L_18115001 D4-c1 1577 chr3L 18135751 18135756 chr3L 18135831 18135837 5 81 0.0 2.5 1.2 2.3 86 chr3L 18135751 intergenic CR44669 - chr3L 18135794 3` UTR CR44669 - chr3L 18135837 3` UTR CR44669 - chr3L_5_18135001 chr3L_18135001 D4-c1 1578 chr3L 18160872 18160900 chr3L 18160962 18160990 9 90 2.5 4.5 3.5 2.0 118 chr3L 18160872 intron CG13699 - chr3L 18160931 intron CG13699 - chr3L 18160990 intron CG13699 - chr3L_9_18160001 chr3L_18160001 D4-c1 1579 chr3L 18163979 18164238 chr3L 18164182 18164406 9 184 0.5 0.5 0.5 6.0 427 chr3L 18163979 intergenic not near genes chr3L 18164192 intergenic not near genes chr3L 18164406 intergenic not near genes chr3L_9_18160001 chr3L_18160001 D4-c1 1580 chr3L 18200950 18200960 chr3L 18201331 18201338 6 380 0.0 10.0 5.0 1.0 388 chr3L 18200950 intergenic not near genes chr3L 18201144 intergenic CG7320 + chr3L 18201338 intergenic CG7320 + chr3L_6_18200001 chr3L_18200001 D4-c1 1581 chr3L 18251754 18251779 chr3L 18251848 18251873 14 94 5.0 3.5 4.2 2.7 119 chr3L 18251754 intergenic CheA75a + chr3L 18251814 intergenic CheA75a + chr3L 18251873 intergenic CheA75a + chr3L_14_18250001 chr3L_18250001 D4-c1 1582 chr3L 18257138 18257166 chr3L 18257217 18257245 11 79 3.5 4.0 3.8 2.3 107 chr3L 18257138 intergenic not near genes chr3L 18257192 intergenic not near genes chr3L 18257245 intergenic not near genes chr3L_11_18255001 chr3L_18255001 D4-c1 1583 chr3L 18301351 18301379 chr3L 18301441 18301452 11 88 0.5 4.0 2.2 3.4 101 chr3L 18301351 intergenic CG13700 - chr3L 18301402 intergenic CG13700 - chr3L 18301452 intergenic CG13700 - chr3L_11_18300001 chr3L_18300001 D4-c1 1584 chr3L 18343672 18343681 chr3L 18343951 18343960 6 279 2.0 8.5 5.2 1.0 288 chr3L 18343672 intergenic not near genes chr3L 18343816 intergenic not near genes chr3L 18343960 intergenic not near genes chr3L_6_18340001 chr3L_18340001 D4-c1 1585 chr3L 18408735 18408757 chr3L 18408821 18408844 8 87 7.5 3.5 5.5 1.2 109 chr3L 18408735 intergenic not near genes chr3L 18408790 intergenic not near genes chr3L 18408844 intergenic not near genes chr3L_8_18405001 chr3L_18405001 D4-c1 1586 chr3L 9013689 9013695 chr3L 18417066 18417066 14 9403375 34.0 32.0 33.0 0.4 9403377 chr3L 9013689 intron Doc2 - chr3L 13715378 intron bru-3 - chr3L 18417066 intergenic not near genes chr3L_14_13715001 chr3L_13715001 D4-c1 1587 chr3L 18436061 18436096 chr3L 18436160 18436194 12 99 1.5 3.0 2.2 3.8 133 chr3L 18436061 intergenic not near genes chr3L 18436128 intergenic not near genes chr3L 18436194 intergenic not near genes chr3L_12_18435001 chr3L_18435001 D4-c1 1588 chr3L 18456278 18456303 chr3L 18456367 18456392 10 89 3.5 5.5 4.5 1.8 114 chr3L 18456278 intergenic CR44670 - chr3L 18456335 intergenic CR44670 - chr3L 18456392 intergenic CR44670 - chr3L_10_18455001 chr3L_18455001 D4-c1 1589 chr3L 18464501 18464506 chr3L 18464575 18464593 5 83 5.0 4.5 4.8 0.9 92 chr3L 18464501 intergenic not near genes chr3L 18464547 intergenic not near genes chr3L 18464593 intergenic not near genes chr3L_5_18460001 chr3L_18460001 D4-c1 1590 chr3L 18464508 18464515 chr3L 18464574 18464602 4 82 4.0 4.5 4.2 0.8 94 chr3L 18464508 intergenic not near genes chr3L 18464555 intergenic not near genes chr3L 18464602 intergenic not near genes chr3L_4_18460001 chr3L_18460001 D4-c1 1591 chr3L 18479062 18479096 chr3L 18479165 18479199 12 103 1.0 1.5 1.2 5.5 137 chr3L 18479062 5` UTR CR44673 + chr3L 18479130 5` UTR CR44673 + chr3L 18479199 5` UTR CR44673 + chr3L_12_18475001 chr3L_18475001 D4-c1 1592 chr3L 18506133 18506163 chr3L 18509597 18509627 F-element 13 3464 3.5 3.0 3.2 3.1 3494 chr3L 18506133 intergenic not near genes chr3L 18507880 intergenic not near genes chr3L 18509627 intergenic not near genes chr3L_13_18505001 chr3L_18505001 D4-c1 1593 chr3L 18528627 18528660 chr3L 18537789 18537822 roo 7 9162 2.5 6.0 4.2 1.3 9195 chr3L 18528627 intergenic not near genes chr3L 18533224 intergenic not near genes chr3L 18537822 intergenic not near genes chr3L_7_18530001 chr3L_18530001 D4-c1 1594 chr3L 18546700 18546734 chr3L 18546795 18546829 13 95 1.5 4.0 2.8 3.4 129 chr3L 18546700 intergenic not near genes chr3L 18546764 intergenic not near genes chr3L 18546829 intergenic not near genes chr3L_13_18545001 chr3L_18545001 D4-c1 1595 chr3L 18593946 18593981 chr3L 18595927 18595959 Doc 9 1981 3.0 0.0 1.5 3.6 2013 chr3L 18593946 intergenic term - chr3L 18594952 intergenic not near genes chr3L 18595959 intergenic CR45389 + chr3L_9_18590001 chr3L_18590001 D4-c1 1596 chr3L 18638577 18638610 chr3L 18638672 18638705 11 95 2.5 2.5 2.5 3.1 128 chr3L 18638577 intron MYPT-75D + chr3L 18638641 intron MYPT-75D + chr3L 18638705 intron MYPT-75D + chr3L_11_18635001 chr3L_18635001 D4-c1 1597 chr3L 18656184 18656219 chr3L 18656270 18656304 17 85 4.5 5.0 4.8 2.9 120 chr3L 18656184 intron MYPT-75D + chr3L 18656244 intron MYPT-75D + chr3L 18656304 intron MYPT-75D + chr3L_17_18655001 chr3L_18655001 D4-c1 1598 chr3L 18657749 18657768 chr3L 18657889 18657908 10 140 3.5 1.5 2.5 2.9 159 chr3L 18657749 intron MYPT-75D + chr3L 18657828 intron MYPT-75D + chr3L 18657908 intron MYPT-75D + chr3L_10_18655001 chr3L_18655001 D4-c1 1599 chr3L 18686960 18686994 chr3L 18687392 18687426 10 431 4.5 4.5 4.5 1.8 466 chr3L 18686960 intergenic not near genes chr3L 18687193 intergenic not near genes chr3L 18687426 intergenic not near genes chr3L_10_18685001 chr3L_18685001 D4-c1 1600 chr3L 18696073 18696099 chr3L 18696193 18696219 12 120 8.0 9.0 8.5 1.3 146 chr3L 18696073 intergenic Dic4 -,CG6893 + chr3L 18696146 intergenic Dic4 -,CG6893 + chr3L 18696219 intergenic Dic4 - chr3L_12_18695001 chr3L_18695001 D4-c1 1601 chr3L 18721771 18721802 chr3L 18721863 18721894 13 92 2.5 1.5 2.0 4.3 123 chr3L 18721771 intergenic CG12477 - chr3L 18721832 intergenic CG12477 - chr3L 18721894 3` UTR CG12477 - chr3L_13_18720001 chr3L_18720001 D4-c1 1602 chr3L 18772411 18772440 chr3L 18781093 18781122 roo 11 8682 2.5 6.5 4.5 2.0 8711 chr3L 18772411 intron ftz-f1 - chr3L 18776766 intron ftz-f1 - chr3L 18781122 intron ftz-f1 - chr3L_11_18775001 chr3L_18775001 D4-c1 1603 chr3L 18797310 18797338 chr3L 18797395 18797423 9 85 4.0 4.5 4.2 1.7 113 chr3L 18797310 intron ftz-f1 - chr3L 18797366 intron ftz-f1 - chr3L 18797423 intron ftz-f1 - chr3L_9_18795001 chr3L_18795001 D4-c1 1604 chr3L 18799109 18799120 chr3L 18799197 18799208 6 88 3.0 6.0 4.5 1.1 99 chr3L 18799109 intron ftz-f1 - chr3L 18799158 intron ftz-f1 - chr3L 18799208 intron ftz-f1 - chr3L_6_18795001 chr3L_18795001 D4-c1 1605 chr3L 18810142 18810174 chr3L 18810220 18810257 7 81 2.0 1.0 1.5 2.8 115 chr3L 18810142 intron CG14073 - chr3L 18810200 intron CG14073 - chr3L 18810257 intron CG14073 - chr3L_7_18810001 chr3L_18810001 D4-c1 1606 chr3L 18843863 18843885 chr3L 18843962 18843984 10 99 8.0 1.5 4.8 1.7 121 chr3L 18843863 intron Indy - chr3L 18843924 intron Indy - chr3L 18843984 intron Indy - chr3L_10_18840001 chr3L_18840001 D4-c1 1607 chr3L 18868965 18868994 chr3L 18869047 18869076 6 82 3.5 5.5 4.5 1.1 111 chr3L 18868965 3` UTR Dysb + chr3L 18869020 3` UTR Dysb + chr3L 18869076 3` UTR Dysb + chr3L_6_18865001 chr3L_18865001 D4-c1 1608 chr3L 6116764 6116766 chr3L 18879446 18879448 5 12762682 0.0 23.0 11.5 0.4 12762684 chr3L 6116764 intron Ets65A + chr3L 12498106 3` UTR CG10638 - chr3L 18879448 exon CG3961 - chr3L_5_12495001 chr3L_12495001 D4-c1 1609 chr3L 18924478 18924509 chr3L 18924555 18924586 7 77 2.5 0.5 1.5 2.8 108 chr3L 18924478 intron CG32204 - chr3L 18924532 intron CG32204 - chr3L 18924586 intron CG32204 - chr3L_7_18920001 chr3L_18920001 D4-c1 1610 chr3L 18933093 18933125 chr3L 18933179 18933211 16 86 2.5 4.5 3.5 3.6 118 chr3L 18933093 intron CG32204 - chr3L 18933152 intron CG32204 - chr3L 18933211 intron CG32204 - chr3L_16_18930001 chr3L_18930001 D4-c1 1611 chr3L 18969597 18969620 chr3L 18969694 18969717 15 95 8.5 5.0 6.8 1.9 120 chr3L 18969597 intergenic not near genes chr3L 18969657 intergenic not near genes chr3L 18969717 intergenic not near genes chr3L_15_18965001 chr3L_18965001 D4-c1 1612 chr3L 19008846 19008871 chr3L 19009185 19009203 jockey 14 338 3.0 5.5 4.2 2.7 357 chr3L 19008846 intron nkd - chr3L 19009024 intron nkd - chr3L 19009203 intron nkd - chr3L_14_19005001 chr3L_19005001 D4-c1 1613 chr3L 19025933 19025965 chr3L 19026018 19026050 22 84 7.0 5.0 6.0 3.1 117 chr3L 19025933 intron nkd - chr3L 19025992 intron nkd - chr3L 19026050 intron nkd - chr3L_22_19025001 chr3L_19025001 D4-c1 1614 chr3L 19082036 19082067 chr3L 19082139 19082170 12 103 4.0 4.5 4.2 2.3 134 chr3L 19082036 intron Mkp3 - chr3L 19082103 intron Mkp3 - chr3L 19082170 intron Mkp3 - chr3L_12_19080001 chr3L_19080001 D4-c1 1615 chr3L 19114201 19114228 chr3L 19114313 19114340 13 110 4.5 3.0 3.8 2.7 139 chr3L 19114201 intron CG14082 - chr3L 19114270 intron CG14082 - chr3L 19114340 intron CG14082 - chr3L_13_19110001 chr3L_19110001 D4-c1 1616 chr3L 19117039 19117073 chr3L 19124487 19124521 mdg1 14 7448 3.0 2.0 2.5 4.0 7482 chr3L 19117039 intron CG14082 - chr3L 19120780 intron CG14082 - chr3L 19124521 intron CG14082 - chr3L_14_19120001 chr3L_19120001 D4-c1 1617 chr3L 19131305 19131334 chr3L 19132847 19132876 9 1543 39.5 41.5 40.5 0.2 1571 chr3L 19131305 intron CG14082 - chr3L 19132090 intron CG14082 - chr3L 19132876 intron CG14082 - chr3L_9_19130001 chr3L_19130001 D4-c1 1618 chr3L 19133676 19133702 chr3L 19133755 19133787 9 84 2.0 3.0 2.5 2.6 111 chr3L 19133676 intron CG14082 - chr3L 19133732 intron CG14082 - chr3L 19133787 intron CG14082 - chr3L_9_19130001 chr3L_19130001 D4-c1 1619 chr3L 19138144 19138151 chr3L 19138239 19138246 4 94 0.0 6.0 3.0 1.0 102 chr3L 19138144 intron CG14082 - chr3L 19138195 intron CG14082 - chr3L 19138246 intron CG14082 - chr3L_4_19135001 chr3L_19135001 D4-c1 1620 chr3L 19182383 19182414 chr3L 19182465 19182496 13 82 4.0 5.5 4.8 2.2 113 chr3L 19182383 intron fz2 - chr3L 19182440 intron fz2 - chr3L 19182496 intron fz2 - chr3L_13_19180001 chr3L_19180001 D4-c1 1621 chr3L 19208057 19208088 chr3L 19209432 19209463 Doc 12 1375 5.0 5.5 5.2 1.9 1406 chr3L 19208057 intron fz2 - chr3L 19208760 intron fz2 - chr3L 19209463 intron fz2 - chr3L_12_19205001 chr3L_19205001 D4-c1 1622 chr3L 19238405 19238419 chr3L 19238952 19238966 9 546 5.5 3.5 4.5 1.6 561 chr3L 19238405 intergenic not near genes chr3L 19238686 intergenic not near genes chr3L 19238966 intergenic not near genes chr3L_9_19235001 chr3L_19235001 D4-c1 1623 chr3L 19248848 19248879 chr3L 19248939 19248970 8 91 5.5 2.5 4.0 1.6 122 chr3L 19248848 intergenic not near genes chr3L 19248909 intergenic not near genes chr3L 19248970 intergenic not near genes chr3L_8_19245001 chr3L_19245001 D4-c1 1624 chr3L 19269814 19269848 chr3L 19270019 19270053 12 204 2.5 7.0 4.8 2.1 239 chr3L 19269814 intron,exon CG14085 +,CG14088 - chr3L 19269934 intron,exon CG14085 +,CG14088 - chr3L 19270053 intron,exon CG14085 +,CG14088 - chr3L_12_19265001 chr3L_19265001 D4-c1 1625 chr3L 19282272 19282289 chr3L 19282369 19282386 12 97 5.5 6.0 5.8 1.8 114 chr3L 19282272 3` UTR Gbs-76A - chr3L 19282329 3` UTR Gbs-76A - chr3L 19282386 3` UTR Gbs-76A - chr3L_12_19280001 chr3L_19280001 D4-c1 1626 chr3L 19325407 19325427 chr3L 19325485 19325505 6 78 4.0 7.5 5.8 0.9 98 chr3L 19325407 intron pip - chr3L 19325456 intron pip - chr3L 19325505 intron pip - chr3L_6_19325001 chr3L_19325001 D4-c1 1627 chr3L 19342760 19342773 chr3L 19342852 19342865 4 92 4.5 2.5 3.5 0.9 105 chr3L 19342760 3` UTR CG32206 - chr3L 19342812 3` UTR CG32206 - chr3L 19342865 3` UTR CG32206 - chr3L_4_19340001 chr3L_19340001 D4-c1 1628 chr3L 19346877 19346884 chr3L 19346956 19346963 4 79 0.0 12.0 6.0 0.6 86 chr3L 19346877 intron CG32206 - chr3L 19346920 intron CG32206 - chr3L 19346963 intron CG32206 - chr3L_4_19345001 chr3L_19345001 D4-c1 1629 chr3L 19365921 19365929 chr3L 19366019 19366027 6 98 0.0 9.5 4.8 1.0 106 chr3L 19365921 intron CG32206 - chr3L 19365974 intron CG32206 - chr3L 19366027 intron CG32206 - chr3L_6_19365001 chr3L_19365001 D4-c1 1630 chr3L 19417801 19417834 chr3L 19417882 19417915 12 81 3.5 5.0 4.2 2.3 114 chr3L 19417801 intergenic not near genes chr3L 19417858 intergenic not near genes chr3L 19417915 intergenic not near genes chr3L_12_19415001 chr3L_19415001 D4-c1 1631 chr3L 19426746 19426782 chr3L 19426825 19426855 26 76 7.0 9.5 8.2 2.8 109 chr3L 19426746 intergenic not near genes chr3L 19426800 intergenic not near genes chr3L 19426855 intergenic not near genes chr3L_26_19425001 chr3L_19425001 D4-c1 1632 chr3L 19434762 19434786 chr3L 19434842 19434866 12 80 5.0 2.5 3.8 2.5 104 chr3L 19434762 intergenic not near genes chr3L 19434814 intergenic not near genes chr3L 19434866 intergenic not near genes chr3L_12_19430001 chr3L_19430001 D4-c1 1633 chr3L 19439286 19439290 chr3L 19439373 19439377 4 87 0.0 7.5 3.8 0.8 91 chr3L 19439286 intergenic not near genes chr3L 19439332 intergenic not near genes chr3L 19439377 intergenic not near genes chr3L_4_19435001 chr3L_19435001 D4-c1 1634 chr3L 19488477 19488503 chr3L 19488560 19488586 9 83 8.5 2.0 5.2 1.5 109 chr3L 19488477 intergenic pncr009:3L -,CG32212 + chr3L 19488532 intergenic pncr009:3L -,CG32212 + chr3L 19488586 intergenic pncr009:3L -,CG32212 + chr3L_9_19485001 chr3L_19485001 D4-c1 1635 chr3L 19783443 19783466 chr3L 19783717 19783740 14 273 1.5 8.5 5.0 2.3 297 chr3L 19783443 intron,intron CG42637 -,Gyc76C - chr3L 19783592 intron,intron CG42637 -,Gyc76C - chr3L 19783740 intron,intron CG42637 -,Gyc76C - chr3L_14_19780001 chr3L_19780001 D4-c1 1636 chr3L 19820298 19820316 chr3L 19827848 19827866 412 10 7550 4.5 2.0 3.2 2.4 7568 chr3L 19820298 intron Deaf1 + chr3L 19824082 intron Deaf1 + chr3L 19827866 intron Deaf1 + chr3L_10_19820001 chr3L_19820001 D4-c1 1637 chr3L 19848502 19848535 chr3L 19857693 19857726 roo 14 9191 2.0 6.5 4.2 2.7 9224 chr3L 19848502 intron Papss + chr3L 19853114 intron Papss + chr3L 19857726 intron Papss + chr3L_14_19850001 chr3L_19850001 D4-c1 1638 chr3L 19861819 19861852 chr3L 19863608 19863641 S-element 13 1789 3.0 4.5 3.8 2.7 1822 chr3L 19861819 5` UTR CR45433 + chr3L 19862730 intergenic not near genes chr3L 19863641 intergenic not near genes chr3L_13_19860001 chr3L_19860001 D4-c1 1639 chr3L 19880650 19880686 chr3L 19885066 19885102 25 4416 60.5 53.0 56.8 0.4 4452 chr3L 19880650 exon CG8334 + chr3L 19882876 exon Mi-2 - chr3L 19885102 exon Mi-2 - chr3L_25_19880001 chr3L_19880001 D4-c1 1640 chr3L 19933535 19933562 chr3L 19934358 19934385 6 823 5.0 1.5 3.2 1.4 850 chr3L 19933535 intergenic CR45678 + chr3L 19933960 5` UTR CR45678 + chr3L 19934385 intergenic CR45678 + chr3L_6_19930001 chr3L_19930001 D4-c1 1641 chr3L 19935447 19935473 chr3L 19937008 19937034 11 1561 2.5 5.0 3.8 2.3 1587 chr3L 19935447 intergenic not near genes chr3L 19936240 intergenic not near genes chr3L 19937034 intergenic not near genes chr3L_11_19935001 chr3L_19935001 D4-c1 1642 chr3L 19981212 19981235 chr3L 19981293 19981316 8 81 2.5 5.5 4.0 1.6 104 chr3L 19981212 intergenic CG17732 + chr3L 19981264 intergenic CG17732 + chr3L 19981316 intergenic CG17732 + chr3L_8_19980001 chr3L_19980001 D4-c1 1643 chr3L 20033867 20033890 chr3L 20033944 20033967 4 77 1.0 3.5 2.2 1.2 100 chr3L 20033867 intergenic not near genes chr3L 20033917 intergenic not near genes chr3L 20033967 intergenic not near genes chr3L_4_20030001 chr3L_20030001 D4-c1 1644 chr3L 20086784 20086820 chr3L 20086863 20086899 13 79 3.0 2.0 2.5 3.7 115 chr3L 20086784 intron sNPF-R - chr3L 20086842 intron sNPF-R - chr3L 20086899 intron sNPF-R - chr3L_13_20085001 chr3L_20085001 D4-c1 1645 chr3L 20113656 20113689 chr3L 20122914 20122947 roo 15 9258 1.5 4.5 3.0 3.8 9291 chr3L 20113656 intergenic not near genes chr3L 20118302 intergenic not near genes chr3L 20122947 intergenic not near genes chr3L_15_20115001 chr3L_20115001 D4-c1 1646 chr3L 20143077 20143115 chr3L 20143158 20143196 12 81 2.5 2.5 2.5 3.4 119 chr3L 20143077 intergenic not near genes chr3L 20143136 intergenic not near genes chr3L 20143196 intergenic not near genes chr3L_12_20140001 chr3L_20140001 D4-c1 1647 chr3L 20148281 20148317 chr3L 20148372 20148408 12 90 4.5 3.0 3.8 2.5 127 chr3L 20148281 intergenic not near genes chr3L 20148344 intergenic not near genes chr3L 20148408 intergenic not near genes chr3L_12_20145001 chr3L_20145001 D4-c1 1648 chr3L 20156165 20156188 chr3L 20156287 20156311 15 123 6.5 5.0 5.8 2.2 146 chr3L 20156165 intron CG42674 - chr3L 20156238 intron CG42674 - chr3L 20156311 intron CG42674 - chr3L_15_20155001 chr3L_20155001 D4-c1 1649 chr3L 20187462 20187473 chr3L 20187542 20187553 6 80 23.5 22.0 22.8 0.3 91 chr3L 20187462 intron CG42674 - chr3L 20187508 intron CG42674 - chr3L 20187553 intron CG42674 - chr3L_6_20185001 chr3L_20185001 D4-c1 1650 chr3L 20257331 20257363 chr3L 20258452 20258484 pogo 14 1121 6.0 6.0 6.0 2.0 1153 chr3L 20257331 intron rdgC + chr3L 20257908 intron rdgC + chr3L 20258484 intron rdgC + chr3L_14_20255001 chr3L_20255001 D4-c1 1651 chr3L 20283377 20283412 chr3L 20283458 20283492 21 81 5.0 4.0 4.5 3.8 115 chr3L 20283377 intron gogo - chr3L 20283434 intron gogo - chr3L 20283492 intron gogo - chr3L_21_20280001 chr3L_20280001 D4-c1 1652 chr3L 20386936 20386972 chr3L 20387039 20387075 12 103 5.5 5.5 5.5 1.8 139 chr3L 20386936 intron fbl + chr3L 20387006 intron fbl + chr3L 20387075 intron fbl + chr3L_12_20385001 chr3L_20385001 D4-c1 1653 chr3L 20462587 20462602 chr3L 20462669 20462684 6 82 4.0 8.0 6.0 0.9 97 chr3L 20462587 intron atk - chr3L 20462636 intron atk - chr3L 20462684 intron atk - chr3L_6_20460001 chr3L_20460001 D4-c1 1654 chr3L 20476751 20476783 chr3L 20484351 20484383 springer 10 7600 4.0 3.5 3.8 2.1 7632 chr3L 20476751 3` UTR isoQC + chr3L 20480567 intergenic not near genes chr3L 20484383 3` UTR ZnT77C - chr3L_10_20480001 chr3L_20480001 D4-c1 1655 chr3L 20487660 20487674 chr3L 20488112 20488126 INE-1 8 452 8.0 3.5 5.8 1.2 466 chr3L 20487660 intron ZnT77C - chr3L 20487893 intron ZnT77C - chr3L 20488126 intron ZnT77C - chr3L_8_20485001 chr3L_20485001 D4-c1 1656 chr3L 20525228 20525229 chr3L 22908066 22908066 4 2382838 20.0 23.5 21.8 0.2 2382838 chr3L 20525228 intron CG4825 - chr3L 21716647 intergenic not near genes chr3L 22908066 intergenic not near genes chr3L_4_21715001 chr3L_21715001 D4-c1 1657 chr3L 20525229 20525230 chr3L 24821494 24821494 5 4296265 20.0 16.5 18.2 0.3 4296265 chr3L 20525229 intron CG4825 - chr3L 22673362 intron CG14457 + chr3L 24821494 intergenic not near genes chr3L_5_22670001 chr3L_22670001 D4-c1 1658 chr3L 20590062 20590097 chr3L 20590602 20590637 412 12 540 4.5 6.5 5.5 1.8 575 chr3L 20590062 intergenic not near genes chr3L 20590350 intergenic not near genes chr3L 20590637 intergenic not near genes chr3L_12_20590001 chr3L_20590001 D4-c1 1659 chr3L 20752112 20752139 chr3L 20752190 20752218 13 79 7.0 9.0 8.0 1.4 106 chr3L 20752112 intergenic not near genes chr3L 20752165 intergenic not near genes chr3L 20752218 intergenic not near genes chr3L_13_20750001 chr3L_20750001 D4-c1 1660 chr3L 20821294 20821308 chr3L 20824764 20824778 NOF 7 3470 3.0 4.5 3.8 1.5 3484 chr3L 20821294 intron Pka-R1 + chr3L 20823036 intron Pka-R1 + chr3L 20824778 intron Pka-R1 + chr3L_7_20820001 chr3L_20820001 D4-c1 1661 chr3L 20826358 20826389 chr3L 20826550 20826581 15 192 7.5 5.5 6.5 2.0 223 chr3L 20826358 intron Pka-R1 + chr3L 20826470 intron Pka-R1 + chr3L 20826581 intron Pka-R1 + chr3L_15_20825001 chr3L_20825001 D4-c1 1662 chr3L 20849270 20849298 chr3L 20849350 20849378 9 80 1.5 4.5 3.0 2.2 108 chr3L 20849270 intron CG32432 - chr3L 20849324 intron CG32432 - chr3L 20849378 intron CG32432 - chr3L_9_20845001 chr3L_20845001 D4-c1 1663 chr3L 20913746 20913780 chr3L 20913829 20913863 12 83 4.5 8.5 6.5 1.6 117 chr3L 20913746 intergenic CR43930 - chr3L 20913804 intergenic CR43930 - chr3L 20913863 intergenic CR43930 - chr3L_12_20910001 chr3L_20910001 D4-c1 1664 chr3L 21014913 21014948 chr3L 21023395 21023430 Tirant 19 8482 6.5 8.5 7.5 2.2 8517 chr3L 21014913 intron skd - chr3L 21019172 intron skd - chr3L 21023430 intron skd - chr3L_19_21015001 chr3L_21015001 D4-c1 1665 chr3L 21106128 21106132 chr3L 21106243 21106247 4 115 4.0 10.5 7.2 0.5 119 chr3L 21106128 intron ko - chr3L 21106188 intron ko - chr3L 21106247 intron ko - chr3L_4_21105001 chr3L_21105001 D4-c1 1666 chr3L 21151868 21151889 chr3L 21156953 21156974 flea 10 5085 7.0 4.5 5.8 1.5 5106 chr3L 21151868 intron Ac78C - chr3L 21154421 intron Ac78C - chr3L 21156974 intron Ac78C - chr3L_10_21150001 chr3L_21150001 D4-c1 1667 chr3L 21232804 21232840 chr3L 21232933 21232964 14 129 3.5 4.0 3.8 2.9 160 chr3L 21232804 intron Eip78C + chr3L 21232884 intron Eip78C + chr3L 21232964 intron Eip78C + chr3L_14_21230001 chr3L_21230001 D4-c1 1668 chr3L 21243747 21243766 chr3L 21251311 21251330 412 4 7564 5.5 7.0 6.2 0.6 7583 chr3L 21243747 intron Eip78C + chr3L 21247538 intron Eip78C + chr3L 21251330 intron Eip78C + chr3L_4_21245001 chr3L_21245001 D4-c1 1669 chr3L 21301731 21301765 chr3L 21301818 21301852 18 87 4.0 4.0 4.0 3.6 121 chr3L 21301731 5` UTR CR45432 + chr3L 21301792 5` UTR,3` UTR CR45432 +,CG11309 - chr3L 21301852 5` UTR,3` UTR CR45432 +,CG11309 - chr3L_18_21300001 chr3L_21300001 D4-c1 1670 chr3L 21306146 21306181 chr3L 21315306 21315341 roo 19 9160 4.0 5.5 4.8 3.3 9195 chr3L 21306146 3` UTR,3` UTR CG7632 +,Pc - chr3L 21310744 intron Pc - chr3L 21315341 3` UTR Pc - chr3L_19_21310001 chr3L_21310001 D4-c1 1671 chr3L 21319525 21319557 chr3L 21319616 21319648 22 91 5.5 2.0 3.8 4.6 123 chr3L 21319525 5` UTR Rab26 + chr3L 21319586 5` UTR Rab26 + chr3L 21319648 5` UTR Rab26 + chr3L_22_21315001 chr3L_21315001 D4-c1 1672 chr3L 21393223 21393260 chr3L 21393494 21393530 22 270 5.5 6.0 5.8 3.2 307 chr3L 21393223 intron rgn + chr3L 21393376 intron rgn + chr3L 21393530 intron rgn + chr3L_22_21390001 chr3L_21390001 D4-c1 1673 chr3L 21406992 21407023 chr3L 21407072 21407103 11 80 6.5 5.5 6.0 1.6 111 chr3L 21406992 intron rgn + chr3L 21407048 intron rgn + chr3L 21407103 intron rgn + chr3L_11_21405001 chr3L_21405001 D4-c1 1674 chr3L 21412756 21412782 chr3L 21412835 21412861 9 78 5.0 5.0 5.0 1.5 105 chr3L 21412756 intron rgn + chr3L 21412808 intron rgn + chr3L 21412861 intron rgn + chr3L_9_21410001 chr3L_21410001 D4-c1 1675 chr3L 21456776 21456808 chr3L 21456870 21456902 20 94 5.0 4.5 4.8 3.4 126 chr3L 21456776 intergenic not near genes chr3L 21456839 intergenic not near genes chr3L 21456902 intergenic not near genes chr3L_20_21455001 chr3L_21455001 D4-c1 1676 chr3L 21498840 21498870 chr3L 21500469 21500507 1360 15 1636 4.0 6.0 5.0 2.5 1667 chr3L 21498840 intron Glg1 - chr3L 21499674 intron Glg1 - chr3L 21500507 intron Glg1 - chr3L_15_21495001 chr3L_21495001 D4-c1 1677 chr3L 21639195 21639226 chr3L 21639275 21639306 12 80 5.0 4.5 4.8 2.1 111 chr3L 21639195 intergenic CG32444 +,CG32445 + chr3L 21639250 intergenic CG32445 +,CG32444 + chr3L 21639306 intergenic CG32445 +,CG32444 + chr3L_12_21635001 chr3L_21635001 D4-c1 1678 chr3L 21749313 21749350 chr3L 21754474 21754498 Doc 14 5160 3.0 4.0 3.5 3.1 5185 chr3L 21749313 intron Syn1 - chr3L 21751906 intron Syn1 - chr3L 21754498 intron Syn1 - chr3L_14_21750001 chr3L_21750001 D4-c1 1679 chr3L 21769051 21769082 chr3L 21769139 21769170 12 88 3.0 5.5 4.2 2.3 119 chr3L 21769051 intron,intron Syn1 -,CG42689 + chr3L 21769110 intron,intron Syn1 -,CG42689 + chr3L 21769170 intron,intron Syn1 -,CG42689 + chr3L_12_21765001 chr3L_21765001 D4-c1 1680 chr3L 21852261 21852284 chr3L 21852348 21852378 20 94 7.0 4.0 5.5 3.1 117 chr3L 21852261 intron mub + chr3L 21852320 intron mub + chr3L 21852378 intron mub + chr3L_20_21850001 chr3L_21850001 D4-c1 1681 chr3L 21855241 21855271 chr3L 21855320 21855350 16 78 4.5 5.0 4.8 2.8 109 chr3L 21855241 intron mub + chr3L 21855296 intron mub + chr3L 21855350 intron mub + chr3L_16_21855001 chr3L_21855001 D4-c1 1682 chr3L 21871555 21871591 chr3L 21871644 21871680 16 89 4.5 5.5 5.0 2.7 125 chr3L 21871555 intron mub + chr3L 21871618 intron mub + chr3L 21871680 intron mub + chr3L_16_21870001 chr3L_21870001 D4-c1 1683 chr3L 22092814 22092827 chr3L 22092916 22092929 9 102 5.5 4.0 4.8 1.6 115 chr3L 22092814 intergenic not near genes chr3L 22092872 intergenic not near genes chr3L 22092929 intergenic not near genes chr3L_9_22090001 chr3L_22090001 D4-c1 1684 chr3L 22099674 22099703 chr3L 22105861 22105890 3S18 15 6186 6.0 4.0 5.0 2.5 6216 chr3L 22099674 intergenic not near genes chr3L 22102782 intergenic not near genes chr3L 22105890 intergenic not near genes chr3L_15_22100001 chr3L_22100001 D4-c1 1685 chr3L 22169452 22169487 chr3L 22169546 22169581 16 94 1.0 2.0 1.5 6.4 129 chr3L 22169452 intron olf413 + chr3L 22169516 intron olf413 + chr3L 22169581 intron olf413 + chr3L_16_22165001 chr3L_22165001 D4-c1 1686 chr3L 22231580 22231592 chr3L 22231671 22231683 6 91 6.5 10.0 8.2 0.7 103 chr3L 22231580 intron olf413 + chr3L 22231632 intron olf413 + chr3L 22231683 intron olf413 + chr3L_6_22230001 chr3L_22230001 D4-c1 1687 chr3L 22361937 22361961 chr3L 22362015 22362039 5 78 6.5 4.0 5.2 0.8 102 chr3L 22361937 intron Ten-m - chr3L 22361988 intron Ten-m - chr3L 22362039 intron Ten-m - chr3L_5_22360001 chr3L_22360001 D4-c1 1688 chr3L 22395595 22395629 chr3L 22395679 22395713 12 84 3.5 2.5 3.0 3.0 118 chr3L 22395595 intron Ten-m - chr3L 22395654 intron Ten-m - chr3L 22395713 intron Ten-m - chr3L_12_22395001 chr3L_22395001 D4-c1 1689 chr3L 22411371 22411399 chr3L 22411446 22411477 9 75 6.5 3.5 5.0 1.5 106 chr3L 22411371 intergenic not near genes chr3L 22411424 intergenic not near genes chr3L 22411477 intergenic not near genes chr3L_9_22410001 chr3L_22410001 D4-c1 1690 chr3L 22507121 22507150 chr3L 22507209 22507238 15 87 7.5 6.0 6.8 1.9 117 chr3L 22507121 intergenic not near genes chr3L 22507180 intergenic not near genes chr3L 22507238 intergenic not near genes chr3L_15_22505001 chr3L_22505001 D4-c1 1691 chr3L 22555767 22555799 chr3L 22563238 22563270 blood 10 7471 4.0 4.0 4.0 2.0 7503 chr3L 22555767 intergenic not near genes chr3L 22559518 intergenic not near genes chr3L 22563270 intergenic not near genes chr3L_10_22555001 chr3L_22555001 D4-c1 1692 chr3L 22570424 22570458 chr3L 22570569 22570603 20 145 4.5 5.5 5.0 3.3 179 chr3L 22570424 intergenic not near genes chr3L 22570514 intergenic not near genes chr3L 22570603 intergenic not near genes chr3L_20_22570001 chr3L_22570001 D4-c1 1693 chr3L 22577627 22577648 chr3L 22582416 22582437 Doc 9 4788 7.5 4.0 5.8 1.3 4810 chr3L 22577627 intergenic not near genes chr3L 22580032 intergenic not near genes chr3L 22582437 3` UTR CG14459 - chr3L_9_22580001 chr3L_22580001 D4-c1 1694 chr3L 22617187 22617222 chr3L 22624640 22624650 blood 16 7451 6.5 3.5 5.0 2.7 7463 chr3L 22617187 intron CG14459 - chr3L 22620918 intron CG14459 - chr3L 22624650 intron CG14459 - chr3L_16_22620001 chr3L_22620001 D4-c1 1695 chr3L 22630738 22630771 chr3L 22630818 22630851 20 79 2.5 4.5 3.5 4.4 113 chr3L 22630738 intron CG14459 - chr3L 22630794 intron CG14459 - chr3L 22630851 intron CG14459 - chr3L_20_22630001 chr3L_22630001 D4-c1 1696 chr3L 22652319 22652353 chr3L 22652458 22652492 24 139 6.0 5.5 5.8 3.5 173 chr3L 22652319 exon CG33772 - chr3L 22652406 intron CG33772 - chr3L 22652492 exon CG33772 - chr3L_24_22650001 chr3L_22650001 D4-c1 1697 chr3L 22761385 22761423 chr3L 22766820 22766858 Ivk 12 5435 3.5 6.0 4.8 2.1 5473 chr3L 22761385 intron SPoCk + chr3L 22764122 intron SPoCk + chr3L 22766858 intron SPoCk + chr3L_12_22760001 chr3L_22760001 D4-c1 1698 chr3L 22786062 22786095 chr3L 22788498 22788531 13 2437 22.5 37.5 30.0 0.4 2469 chr3L 22786062 3` UTR SPoCk + chr3L 22787296 3` UTR SPoCk + chr3L 22788531 exon CG14448 + chr3L_13_22785001 chr3L_22785001 D4-c1 1699 chr3L 22853466 22853722 chr3L 22853554 22853808 35 87 4.0 10.0 7.0 4.4 342 chr3L 22853466 5` UTR,5` UTR CR43426 +,CG32462 - chr3L 22853637 5` UTR CR43426 + chr3L 22853808 5` UTR CR43426 + chr3L_35_22850001 chr3L_22850001 D4-c1 1700 chr3L 22855321 22855354 chr3L 22855405 22855438 11 82 5.0 5.5 5.2 1.8 117 chr3L 22855321 exon CG32459 - chr3L 22855380 exon CG32459 - chr3L 22855438 exon CG32459 - chr3L_11_22855001 chr3L_22855001 D4-c1 1701 chr3L 22865985 22866011 chr3L 22867119 22867145 Doc 9 1134 5.5 3.5 4.5 1.6 1160 chr3L 22865985 intron CG33170 + chr3L 22866565 intron CG33170 + chr3L 22867145 intron CG33170 + chr3L_9_22865001 chr3L_22865001 D4-c1 1702 chr3L 19220635 19220637 chr3L 22908067 22908067 4 3687432 26.0 23.5 24.8 0.2 3687432 chr3L 19220635 intron fz2 - chr3L 21064351 intron siz + chr3L 22908067 intergenic not near genes chr3L_4_21060001 chr3L_21060001 D4-c1 1703 chr3L 22989866 22989890 chr3L 22996841 22996865 297 9 6975 6.0 5.5 5.8 1.3 6999 chr3L 22989866 intergenic not near genes chr3L 22993366 intergenic not near genes chr3L 22996865 intergenic not near genes chr3L_9_22990001 chr3L_22990001 D4-c1 1704 chr3L 23042226 23042257 chr3L 23048980 23049011 gypsy6 16 6753 3.5 8.5 6.0 2.3 6785 chr3L 23042226 intergenic not near genes chr3L 23045618 intergenic not near genes chr3L 23049011 intergenic not near genes chr3L_16_23045001 chr3L_23045001 D4-c1 1705 chr3L 23055548 23055569 chr3L 23055693 23055709 4 144 3.5 8.0 5.8 0.6 161 chr3L 23055548 intergenic not near genes chr3L 23055628 intergenic not near genes chr3L 23055709 intergenic not near genes chr3L_4_23055001 chr3L_23055001 D4-c1 1706 chr3L 23062893 23062899 chr3L 25074004 25074010 Tirant 6 2011111 11.0 26.0 18.5 0.3 2011117 chr3L 23062893 intergenic not near genes chr3L 24068452 intergenic not near genes chr3L 25074010 intergenic not near genes chr3L_6_24065001 chr3L_24065001 D4-c1 1707 chr3L 23088289 23088316 chr3L 23088372 23088399 11 81 3.5 4.0 3.8 2.3 110 chr3L 23088289 intergenic not near genes chr3L 23088344 intergenic not near genes chr3L 23088399 intergenic not near genes chr3L_11_23085001 chr3L_23085001 D4-c1 1708 chr3L 23182815 23182852 chr3L 23182892 23182929 14 77 2.0 6.0 4.0 2.8 114 chr3L 23182815 intron CG34031 + chr3L 23182872 intron CG34031 + chr3L 23182929 intron CG34031 + chr3L_14_23180001 chr3L_23180001 D4-c1 1709 chr3L 23340916 23340938 chr3L 23341224 23341246 4 308 2.0 1.5 1.8 1.4 330 chr3L 23340916 intron CG32230 + chr3L 23341081 intron CG32230 + chr3L 23341246 intron CG32230 + chr3L_4_23340001 chr3L_23340001 D4-c1 1710 chr3L 23603168 23603187 chr3L 23603263 23603282 14 95 2.5 9.0 5.8 2.1 114 chr3L 23603168 intron AGO3 + chr3L 23603225 intron AGO3 + chr3L 23603282 intron AGO3 + chr3L_14_23600001 chr3L_23600001 D4-c1 1711 chr3L 23824027 23824048 chr3L 23824441 23824462 8 414 6.5 2.0 4.2 1.5 435 chr3L 23824027 intergenic not near genes chr3L 23824244 intergenic not near genes chr3L 23824462 intergenic not near genes chr3L_8_23820001 chr3L_23820001 D4-c1 1712 chr3L 24012409 24012438 chr3L 24020751 24020780 roo 8 8342 2.5 5.5 4.0 1.6 8371 chr3L 24012409 intergenic not near genes chr3L 24016594 intergenic not near genes chr3L 24020780 intergenic not near genes chr3L_8_24015001 chr3L_24015001 D4-c1 1713 chr3L 24168786 24168822 chr3L 24176115 24176151 ZAM 13 7328 6.5 7.5 7.0 1.6 7365 chr3L 24168786 intron Snap25 + chr3L 24172468 intron Snap25 + chr3L 24176151 intron Snap25 + chr3L_13_24170001 chr3L_24170001 D4-c1 1714 chr3L 24791895 24791922 chr3L 24796675 24796702 Doc 7 4780 5.0 4.5 4.8 1.2 4807 chr3L 24791895 intergenic not near genes chr3L 24794298 intergenic not near genes chr3L 24796702 intergenic not near genes chr3L_7_24790001 chr3L_24790001 D4-c1 1715 chr3L 24892838 24892843 chr3L 24893003 24893025 5 178 3.0 3.5 3.2 1.2 187 chr3L 24892838 intergenic not near genes chr3L 24892932 intergenic not near genes chr3L 24893025 intergenic not near genes chr3L_5_24890001 chr3L_24890001 D4-c1 1716 chr3L 25331634 25331653 chr3L 25331726 25331745 9 91 10.5 10.0 10.2 0.8 111 chr3L 25331634 intergenic not near genes chr3L 25331690 intergenic not near genes chr3L 25331745 intergenic not near genes chr3L_9_25330001 chr3L_25330001 D4-c1 1717 chr3L 26290091 26290130 chr3L 26290263 26290302 10 172 2.5 5.0 3.8 2.1 211 chr3L 26290091 intergenic not near genes chr3L 26290196 intergenic not near genes chr3L 26290302 intergenic not near genes chr3L_10_26290001 chr3L_26290001 D4-c1 1718 chr3L 27390688 27390712 chr3L 27390768 27390792 12 78 38.5 33.0 35.8 0.3 104 chr3L 27390688 intron Dbp80 + chr3L 27390740 intron Dbp80 + chr3L 27390792 intron Dbp80 + chr3L_12_27390001 chr3L_27390001 D4-c1 1719 chr3L 27716920 27716956 chr3L 27717002 27717038 14 82 4.0 4.5 4.2 2.7 118 chr3L 27716920 intergenic not near genes chr3L 27716979 intergenic not near genes chr3L 27717038 intergenic not near genes chr3L_14_27715001 chr3L_27715001 D4-c1 1720 chr3R 1521170 1521180 chr3R 1521259 1521269 7 89 20.5 19.0 19.8 0.3 99 chr3R 1521170 intergenic not near genes chr3R 1521220 intergenic not near genes chr3R 1521269 intergenic not near genes chr3R_7_1520001 chr3R_1520001 D4-c1 1721 chr3R 1866436 1866441 chr3R 1866797 1866802 5 360 30.0 21.5 25.8 0.2 366 chr3R 1866436 intron CG42623 + chr3R 1866619 intron CG42623 + chr3R 1866802 intron CG42623 + chr3R_5_1865001 chr3R_1865001 D4-c1 1722 chr3R 1867168 1867170 chr3R 1954914 1954922 Doc3-element 5 87750 21.0 13.0 17.0 0.3 87754 chr3R 1867168 intron CG42623 + chr3R 1911045 intron CG42623 + chr3R 1954922 intergenic not near genes chr3R_5_1910001 chr3R_1910001 D4-c1 1723 chr3R 2534136 2534164 chr3R 2541706 2541734 24 7569 33.0 28.5 30.8 0.8 7598 chr3R 2534136 intergenic not near genes chr3R 2537935 intergenic not near genes chr3R 2541734 intergenic not near genes chr3R_24_2535001 chr3R_2535001 D4-c1 1724 chr3R 2556483 2556507 chr3R 2556574 2556598 9 91 1.5 4.0 2.8 2.4 115 chr3R 2556483 intron CG41056 - chr3R 2556540 intron CG41056 - chr3R 2556598 intron CG41056 - chr3R_9_2555001 chr3R_2555001 D4-c1 1725 chr3R 2556879 2556909 chr3R 2557611 2557641 9 732 34.5 25.0 29.8 0.3 762 chr3R 2556879 intron CG41056 - chr3R 2557260 intron CG41056 - chr3R 2557641 intron CG41056 - chr3R_9_2555001 chr3R_2555001 D4-c1 1726 chr3R 3178705 3178712 chr3R 3595190 3595197 4 416485 23.5 21.0 22.2 0.2 416492 chr3R 3178705 intron CG42617 - chr3R 3386951 intergenic not near genes chr3R 3595197 intergenic not near genes chr3R_4_3385001 chr3R_3385001 D4-c1 1727 chr3R 4063809 4063828 chr3R 4069090 4069107 8 5281 10.0 22.5 16.2 0.5 5298 chr3R 4063809 intergenic not near genes chr3R 4066458 intergenic not near genes chr3R 4069107 intergenic not near genes chr3R_8_4065001 chr3R_4065001 D4-c1 1728 chr3R 4206073 4206104 chr3R 4211649 4211680 mdg3 5 5576 4.0 3.0 3.5 1.1 5607 chr3R 4206073 intron CG14636 - chr3R 4208876 intron CG14636 - chr3R 4211680 intron CG14636 - chr3R_5_4205001 chr3R_4205001 D4-c1 1729 chr3R 4366755 4366790 chr3R 4375139 4375174 roo 18 8384 3.0 3.0 3.0 4.5 8419 chr3R 4366755 3` UTR CG1090 + chr3R 4370964 intergenic not near genes chr3R 4375174 5` UTR CR44922 + chr3R_18_4370001 chr3R_4370001 D4-c1 1730 chr3R 4408410 4408442 chr3R 4412715 4412747 Juan 13 4305 7.5 1.0 4.2 2.5 4337 chr3R 4408410 intron CG32944 - chr3R 4410578 intron CG32944 - chr3R 4412747 intron CG32944 - chr3R_13_4410001 chr3R_4410001 D4-c1 1731 chr3R 4454181 4454215 chr3R 4454260 4454294 13 79 5.5 5.0 5.2 2.1 113 chr3R 4454181 intron,5` UTR CG31522 -,CR43629 + chr3R 4454238 intron,5` UTR CG31522 -,CR43629 + chr3R 4454294 intron,5` UTR CG31522 -,CR43629 + chr3R_13_4450001 chr3R_4450001 D4-c1 1732 chr3R 4657287 4657316 chr3R 4657377 4657406 20 89 3.5 4.0 3.8 4.2 119 chr3R 4657287 intron spartin + chr3R 4657346 intron spartin + chr3R 4657406 intron spartin + chr3R_20_4655001 chr3R_4655001 D4-c1 1733 chr3R 4665075 4665101 chr3R 4665156 4665182 13 81 3.5 6.0 4.8 2.2 107 chr3R 4665075 intron CG43427 + chr3R 4665128 intron CG43427 + chr3R 4665182 intron CG43427 + chr3R_13_4665001 chr3R_4665001 D4-c1 1734 chr3R 4683181 4683208 chr3R 4684941 4684968 S-element 16 1760 5.0 8.5 6.8 2.1 1787 chr3R 4683181 intron CG43427 + chr3R 4684074 intron CG43427 + chr3R 4684968 intron CG43427 + chr3R_16_4680001 chr3R_4680001 D4-c1 1735 chr3R 4699084 4699113 chr3R 4699449 4699478 13 365 5.0 3.5 4.2 2.5 394 chr3R 4699084 intron CG43427 + chr3R 4699281 intron CG43427 + chr3R 4699478 intron CG43427 + chr3R_13_4695001 chr3R_4695001 D4-c1 1736 chr3R 4719478 4719493 chr3R 4719687 4719702 9 209 7.0 8.5 7.8 1.0 224 chr3R 4719478 3` UTR Nep2 - chr3R 4719590 3` UTR Nep2 - chr3R 4719702 3` UTR Nep2 - chr3R_9_4715001 chr3R_4715001 D4-c1 1737 chr3R 4753237 4753263 chr3R 4757541 4757567 F-element 10 4304 6.0 8.0 7.0 1.2 4330 chr3R 4753237 intron,intron atms +,CG44098 - chr3R 4755402 intron,intron atms +,CG44098 - chr3R 4757567 intron,exon atms +,CG44098 - chr3R_10_4755001 chr3R_4755001 D4-c1 1738 chr3R 4769157 4769190 chr3R 4769236 4769269 16 79 4.5 2.5 3.5 3.6 112 chr3R 4769157 intron,intron atms +,CG44098 - chr3R 4769213 intron,intron atms +,CG44098 - chr3R 4769269 intron,intron atms +,CG44098 - chr3R_16_4765001 chr3R_4765001 D4-c1 1739 chr3R 4784518 4784548 chr3R 4791390 4791420 16 6872 62.0 55.5 58.8 0.3 6902 chr3R 4784518 exon CG17387 - chr3R 4787969 exon ctrip - chr3R 4791420 exon ctrip - chr3R_16_4785001 chr3R_4785001 D4-c1 1740 chr3R 4887477 4887508 chr3R 4894855 4894883 rover 12 7377 9.0 4.5 6.8 1.5 7406 chr3R 4887477 intergenic not near genes chr3R 4891180 intergenic not near genes chr3R 4894883 intergenic not near genes chr3R_12_4890001 chr3R_4890001 D4-c1 1741 chr3R 4922343 4922363 chr3R 4922423 4922443 10 80 9.0 6.0 7.5 1.2 100 chr3R 4922343 intron Cdep + chr3R 4922393 intron Cdep + chr3R 4922443 intron Cdep + chr3R_10_4920001 chr3R_4920001 D4-c1 1742 chr3R 4943611 4943623 chr3R 4943717 4943729 5 106 7.0 2.5 4.8 0.9 118 chr3R 4943611 intron Cdep + chr3R 4943670 intron Cdep + chr3R 4943729 intron Cdep + chr3R_5_4940001 chr3R_4940001 D4-c1 1743 chr3R 4964213 4964245 chr3R 4964322 4964354 13 109 4.0 5.0 4.5 2.4 141 chr3R 4964213 intergenic not near genes chr3R 4964284 intergenic not near genes chr3R 4964354 intergenic not near genes chr3R_13_4960001 chr3R_4960001 D4-c1 1744 chr3R 4966012 4966032 chr3R 4966105 4966125 6 93 2.5 1.5 2.0 2.0 113 chr3R 4966012 intron CG1124 + chr3R 4966068 intron CG1124 + chr3R 4966125 intron CG1124 + chr3R_6_4965001 chr3R_4965001 D4-c1 1745 chr3R 4975934 4975967 chr3R 4976036 4976069 12 102 1.5 4.5 3.0 3.0 135 chr3R 4975934 intergenic not near genes chr3R 4976002 intergenic not near genes chr3R 4976069 intergenic not near genes chr3R_12_4975001 chr3R_4975001 D4-c1 1746 chr3R 5045842 5045878 chr3R 5052945 5052981 HMS-Beagle 13 7103 6.0 5.5 5.8 1.9 7139 chr3R 5045842 intron CR43635 - chr3R 5049412 intergenic not near genes chr3R 5052981 intergenic CR45588 - chr3R_13_5045001 chr3R_5045001 D4-c1 1747 chr3R 5057767 5057804 chr3R 5057959 5057996 19 192 5.5 3.0 4.2 3.7 229 chr3R 5057767 intergenic not near genes chr3R 5057882 intergenic not near genes chr3R 5057996 intergenic not near genes chr3R_19_5055001 chr3R_5055001 D4-c1 1748 chr3R 5067979 5068014 chr3R 5073497 5073532 mdg3 20 5518 6.5 5.5 6.0 2.9 5553 chr3R 5067979 intergenic not near genes chr3R 5070756 intergenic not near genes chr3R 5073532 intergenic not near genes chr3R_20_5070001 chr3R_5070001 D4-c1 1749 chr3R 5114910 5114943 chr3R 5115012 5115045 16 102 5.5 4.5 5.0 2.7 135 chr3R 5114910 intergenic not near genes chr3R 5114978 intergenic not near genes chr3R 5115045 intergenic not near genes chr3R_16_5110001 chr3R_5110001 D4-c1 1750 chr3R 5142296 5142319 chr3R 5142380 5142403 11 84 3.5 5.5 4.5 2.0 107 chr3R 5142296 intergenic not near genes chr3R 5142350 intergenic not near genes chr3R 5142403 intergenic not near genes chr3R_11_5140001 chr3R_5140001 D4-c1 1751 chr3R 5158148 5158175 chr3R 5158242 5158269 11 94 6.5 9.0 7.8 1.2 121 chr3R 5158148 intron dpr16 + chr3R 5158208 intron dpr16 + chr3R 5158269 intron dpr16 + chr3R_11_5155001 chr3R_5155001 D4-c1 1752 chr3R 5191364 5191398 chr3R 5191639 5191674 18 276 31.5 40.5 36.0 0.5 310 chr3R 5191364 intron cno - chr3R 5191519 intron cno - chr3R 5191674 intron cno - chr3R_18_5190001 chr3R_5190001 D4-c1 1753 chr3R 5278087 5278117 chr3R 5278169 5278199 15 82 5.0 5.5 5.2 2.4 112 chr3R 5278087 intron mtd - chr3R 5278143 intron mtd - chr3R 5278199 intron mtd - chr3R_15_5275001 chr3R_5275001 D4-c1 1754 chr3R 5284438 5284472 chr3R 5287841 5287876 9 3404 16.0 18.0 17.0 0.5 3438 chr3R 5284438 intron mtd - chr3R 5286157 intron mtd - chr3R 5287876 intron mtd - chr3R_9_5285001 chr3R_5285001 D4-c1 1755 chr3R 5338400 5338427 chr3R 5343578 5343605 Rt1c 19 5178 7.5 9.5 8.5 2.0 5205 chr3R 5338400 intron mtd - chr3R 5341002 intron mtd - chr3R 5343605 intron mtd - chr3R_19_5340001 chr3R_5340001 D4-c1 1756 chr3R 5353130 5353164 chr3R 5353212 5353246 19 82 5.0 4.5 4.8 3.3 116 chr3R 5353130 intergenic not near genes chr3R 5353188 intergenic not near genes chr3R 5353246 intergenic CG11999 - chr3R_19_5350001 chr3R_5350001 D4-c1 1757 chr3R 5385972 5386007 chr3R 5386144 5386179 14 172 5.5 7.0 6.2 1.9 207 chr3R 5385972 intron kkv - chr3R 5386076 intron kkv - chr3R 5386179 intron kkv - chr3R_14_5385001 chr3R_5385001 D4-c1 1758 chr3R 5445958 5445992 chr3R 5452419 5452453 Burdock 13 6461 4.0 2.5 3.2 3.1 6495 chr3R 5445958 intron CG14669 + chr3R 5449206 intron CG14669 + chr3R 5452453 intron CG14669 + chr3R_13_5445001 chr3R_5445001 D4-c1 1759 chr3R 5593414 5593448 chr3R 5593501 5593535 19 87 3.0 3.0 3.0 4.8 121 chr3R 5593414 3` UTR Vha26 + chr3R 5593474 3` UTR Vha26 + chr3R 5593535 3` UTR Vha26 + chr3R_19_5590001 chr3R_5590001 D4-c1 1760 chr3R 5627010 5627043 chr3R 5627127 5627160 9 117 2.0 1.0 1.5 3.6 150 chr3R 5627010 intergenic not near genes chr3R 5627085 intergenic not near genes chr3R 5627160 intergenic not near genes chr3R_9_5625001 chr3R_5625001 D4-c1 1761 chr3R 5654469 5654479 chr3R 5654550 5654560 8 81 9.5 8.0 8.8 0.8 91 chr3R 5654469 intron elm - chr3R 5654514 intron elm - chr3R 5654560 intron elm - chr3R_8_5650001 chr3R_5650001 D4-c1 1762 chr3R 5654480 5654491 chr3R 5654549 5654572 13 80 6.0 7.5 6.8 1.7 92 chr3R 5654480 intron elm - chr3R 5654526 intron elm - chr3R 5654572 intron elm - chr3R_13_5650001 chr3R_5650001 D4-c1 1763 chr3R 5665438 5665455 chr3R 5665554 5665571 7 115 3.5 6.0 4.8 1.2 133 chr3R 5665438 3` UTR Xe7 - chr3R 5665504 3` UTR Xe7 - chr3R 5665571 3` UTR Xe7 - chr3R_7_5665001 chr3R_5665001 D4-c1 1764 chr3R 5726089 5726124 chr3R 5726252 5726287 13 163 2.5 3.0 2.8 3.4 198 chr3R 5726089 intergenic not near genes chr3R 5726188 intergenic not near genes chr3R 5726287 intergenic not near genes chr3R_13_5725001 chr3R_5725001 D4-c1 1765 chr3R 5746014 5746045 chr3R 5746256 5746287 pogo 23 242 8.5 6.0 7.2 2.8 273 chr3R 5746014 3` UTR Madm + chr3R 5746150 3` UTR Madm + chr3R 5746287 3` UTR Madm + chr3R_23_5745001 chr3R_5745001 D4-c1 1766 chr3R 5747011 5747046 chr3R 5753203 5753238 diver 8 6192 5.0 4.0 4.5 1.5 6227 chr3R 5747011 intergenic Madm + chr3R 5750124 intergenic not near genes chr3R 5753238 intergenic CG2091 - chr3R_8_5750001 chr3R_5750001 D4-c1 1767 chr3R 5770825 5770857 chr3R 5771039 5771071 16 214 7.5 4.5 6.0 2.3 246 chr3R 5770825 intron CG2082 - chr3R 5770948 intron CG2082 - chr3R 5771071 intron CG2082 - chr3R_16_5770001 chr3R_5770001 D4-c1 1768 chr3R 5772381 5772408 chr3R 5772540 5772567 13 159 3.0 5.0 4.0 2.6 186 chr3R 5772381 intron CG2082 - chr3R 5772474 intron CG2082 - chr3R 5772567 intron CG2082 - chr3R_13_5770001 chr3R_5770001 D4-c1 1769 chr3R 5800069 5800086 chr3R 5800375 5800392 7 306 3.5 3.5 3.5 1.6 323 chr3R 5800069 intergenic CG10979 + chr3R 5800230 intergenic CG10979 + chr3R 5800392 intergenic CG10979 + chr3R_7_5800001 chr3R_5800001 D4-c1 1770 chr3R 5809114 5809145 chr3R 5809356 5809387 pogo 11 242 3.0 5.0 4.0 2.2 273 chr3R 5809114 3` UTR CG11000 + chr3R 5809250 3` UTR CG11000 + chr3R 5809387 3` UTR CG11000 + chr3R_11_5805001 chr3R_5805001 D4-c1 1771 chr3R 5822383 5822408 chr3R 5823551 5823575 1360 12 1168 4.0 7.0 5.5 1.8 1192 chr3R 5822383 3` UTR CG2023 - chr3R 5822979 3` UTR CG2023 - chr3R 5823575 3` UTR CG2023 - chr3R_12_5820001 chr3R_5820001 D4-c1 1772 chr3R 5860570 5860581 chr3R 5860674 5860685 6 104 6.0 6.0 6.0 0.9 115 chr3R 5860570 intron CG2017 - chr3R 5860628 intron CG2017 - chr3R 5860685 intron CG2017 - chr3R_6_5860001 chr3R_5860001 D4-c1 1773 chr3R 5927559 5927590 chr3R 5927800 5927831 pogo 18 241 7.5 3.0 5.2 2.9 272 chr3R 5927559 intron CG34113 - chr3R 5927695 intron CG34113 - chr3R 5927831 intron CG34113 - chr3R_18_5925001 chr3R_5925001 D4-c1 1774 chr3R 5931847 5931884 chr3R 5931924 5931955 22 75 2.0 2.5 2.2 6.9 108 chr3R 5931847 intron CG34113 - chr3R 5931901 intron CG34113 - chr3R 5931955 intron CG34113 - chr3R_22_5930001 chr3R_5930001 D4-c1 1775 chr3R 5965661 5965696 chr3R 5965777 5965812 8 116 6.5 3.5 5.0 1.3 151 chr3R 5965661 intergenic CR44925 + chr3R 5965736 intergenic CR44925 + chr3R 5965812 5` UTR CR44925 + chr3R_8_5965001 chr3R_5965001 D4-c1 1776 chr3R 6015968 6015995 chr3R 6024470 6024497 Tirant 17 8501 4.0 4.0 4.0 3.4 8529 chr3R 6015968 intergenic not near genes chr3R 6020232 intergenic not near genes chr3R 6024497 intergenic not near genes chr3R_17_6020001 chr3R_6020001 D4-c1 1777 chr3R 6039786 6039798 chr3R 6040656 6040671 4 874 7.5 4.5 6.0 0.6 885 chr3R 6039786 intergenic not near genes chr3R 6040228 intergenic not near genes chr3R 6040671 intergenic not near genes chr3R_4_6040001 chr3R_6040001 D4-c1 1778 chr3R 6039799 6039814 chr3R 6040655 6040680 5 871 5.0 4.5 4.8 0.9 881 chr3R 6039799 intergenic not near genes chr3R 6040240 intergenic not near genes chr3R 6040680 intergenic not near genes chr3R_5_6040001 chr3R_6040001 D4-c1 1779 chr3R 6059863 6059900 chr3R 6059950 6059987 19 85 8.5 4.0 6.2 2.6 124 chr3R 6059863 intergenic not near genes chr3R 6059925 intergenic not near genes chr3R 6059987 intergenic not near genes chr3R_19_6055001 chr3R_6055001 D4-c1 1780 chr3R 6121026 6121166 chr3R 6121103 6121385 14 84 1.5 2.5 2.0 4.7 359 chr3R 6121026 intergenic not near genes chr3R 6121206 intergenic not near genes chr3R 6121385 intergenic not near genes chr3R_14_6120001 chr3R_6120001 D4-c1 1781 chr3R 6146914 6146947 chr3R 6147067 6147100 18 153 5.0 3.5 4.2 3.5 186 chr3R 6146914 intergenic not near genes chr3R 6147007 intergenic not near genes chr3R 6147100 intergenic not near genes chr3R_18_6145001 chr3R_6145001 D4-c1 1782 chr3R 6158519 6158540 chr3R 6167102 6167124 Tirant 5 8582 9.5 8.0 8.8 0.5 8605 chr3R 6158519 intergenic not near genes chr3R 6162822 intergenic not near genes chr3R 6167124 intergenic CG1077 + chr3R_5_6160001 chr3R_6160001 D4-c1 1783 chr3R 6175170 6175207 chr3R 6182443 6182480 HMS-Beagle2 10 7271 4.0 9.0 6.5 1.3 7310 chr3R 6175170 intergenic Osi1 + chr3R 6178825 intron CR45194 + chr3R 6182480 intergenic CR45194 + chr3R_10_6175001 chr3R_6175001 D4-c1 1784 chr3R 6206283 6206316 chr3R 6206500 6206534 BS 16 218 4.5 5.0 4.8 2.8 251 chr3R 6206283 exon Osi24 + chr3R 6206408 intron Osi24 + chr3R 6206534 intron Osi24 + chr3R_16_6205001 chr3R_6205001 D4-c1 1785 chr3R 6216999 6217033 chr3R 6217241 6217275 17 242 4.5 4.5 4.5 3.1 276 chr3R 6216999 intron Osi3 + chr3R 6217137 intron Osi3 + chr3R 6217275 intron Osi3 + chr3R_17_6215001 chr3R_6215001 D4-c1 1786 chr3R 6461575 6461611 chr3R 6461657 6461692 5 81 2.5 3.5 3.0 1.2 117 chr3R 6461575 intergenic not near genes chr3R 6461634 intergenic not near genes chr3R 6461692 intergenic not near genes chr3R_5_6460001 chr3R_6460001 D4-c1 1787 chr3R 6508789 6508824 chr3R 6508870 6508905 14 81 5.5 5.0 5.2 2.3 116 chr3R 6508789 intergenic not near genes chr3R 6508847 intergenic not near genes chr3R 6508905 intergenic not near genes chr3R_14_6505001 chr3R_6505001 D4-c1 1788 chr3R 6510022 6510056 chr3R 6515104 6515138 jockey 11 5082 4.0 1.5 2.8 2.9 5116 chr3R 6510022 intergenic not near genes chr3R 6512580 intergenic not near genes chr3R 6515138 intergenic not near genes chr3R_11_6510001 chr3R_6510001 D4-c1 1789 chr3R 6526346 6526377 chr3R 6526539 6526570 11 193 4.0 1.5 2.8 2.9 224 chr3R 6526346 intergenic not near genes chr3R 6526458 intergenic not near genes chr3R 6526570 intergenic not near genes chr3R_11_6525001 chr3R_6525001 D4-c1 1790 chr3R 6550322 6550347 chr3R 6550404 6550429 11 82 6.0 4.5 5.2 1.8 107 chr3R 6550322 intron dpr11 - chr3R 6550376 intron dpr11 - chr3R 6550429 intron dpr11 - chr3R_11_6550001 chr3R_6550001 D4-c1 1791 chr3R 6624258 6624284 chr3R 6624341 6624367 11 83 5.0 3.5 4.2 2.1 109 chr3R 6624258 intergenic not near genes chr3R 6624312 intergenic not near genes chr3R 6624367 intergenic not near genes chr3R_11_6620001 chr3R_6620001 D4-c1 1792 chr3R 6639909 6639931 chr3R 6639988 6640010 12 79 7.0 0.0 3.5 2.7 101 chr3R 6639909 intergenic not near genes chr3R 6639960 intergenic not near genes chr3R 6640010 intergenic not near genes chr3R_12_6635001 chr3R_6635001 D4-c1 1793 chr3R 6640613 6640647 chr3R 6640690 6640724 16 77 2.5 3.5 3.0 4.0 111 chr3R 6640613 intergenic not near genes chr3R 6640668 intergenic not near genes chr3R 6640724 intergenic not near genes chr3R_16_6640001 chr3R_6640001 D4-c1 1794 chr3R 6643541 6643578 chr3R 6643644 6643680 20 103 2.5 6.0 4.2 3.8 139 chr3R 6643541 intron CG1315 - chr3R 6643610 intron CG1315 - chr3R 6643680 intron CG1315 - chr3R_20_6640001 chr3R_6640001 D4-c1 1795 chr3R 6705683 6705721 chr3R 6705908 6705946 10 225 4.0 2.0 3.0 2.5 263 chr3R 6705683 intergenic not near genes chr3R 6705814 intergenic not near genes chr3R 6705946 intergenic not near genes chr3R_10_6705001 chr3R_6705001 D4-c1 1796 chr3R 6737497 6737531 chr3R 6739285 6739319 Doc 17 1788 3.5 4.0 3.8 3.5 1822 chr3R 6737497 intron pb - chr3R 6738408 intron pb - chr3R 6739319 intron pb - chr3R_17_6735001 chr3R_6735001 D4-c1 1797 chr3R 6856382 6856400 chr3R 6856500 6856518 10 118 2.0 5.0 3.5 2.2 136 chr3R 6856382 intergenic not near genes chr3R 6856450 intergenic not near genes chr3R 6856518 intergenic not near genes chr3R_10_6855001 chr3R_6855001 D4-c1 1798 chr3R 6879075 6879095 chr3R 6879335 6879360 13 264 7.0 5.0 6.0 1.9 285 chr3R 6879075 intron CR44931 - chr3R 6879218 intron CR44931 - chr3R 6879360 intron CR44931 - chr3R_13_6875001 chr3R_6875001 D4-c1 1799 chr3R 6893298 6893334 chr3R 6893433 6893469 17 135 2.5 8.5 5.5 2.6 171 chr3R 6893298 3` UTR CR45559 - chr3R 6893384 3` UTR CR45559 - chr3R 6893469 intergenic CR45559 - chr3R_17_6890001 chr3R_6890001 D4-c1 1800 chr3R 6918062 6918091 chr3R 6918141 6918170 10 79 4.0 4.5 4.2 1.9 108 chr3R 6918062 intron Antp - chr3R 6918116 intron Antp - chr3R 6918170 intron Antp - chr3R_10_6915001 chr3R_6915001 D4-c1 1801 chr3R 6958923 6958952 chr3R 6959135 6959164 11 211 4.5 5.5 5.0 1.8 241 chr3R 6958923 intron Antp - chr3R 6959044 intron Antp - chr3R 6959164 intron Antp - chr3R_11_6955001 chr3R_6955001 D4-c1 1802 chr3R 6978896 6978912 chr3R 6978976 6978998 4 84 4.0 3.5 3.8 0.8 102 chr3R 6978896 intron Antp - chr3R 6978947 intron Antp - chr3R 6978998 intron Antp - chr3R_4_6975001 chr3R_6975001 D4-c1 1803 chr3R 7034689 7034720 chr3R 7034816 7034847 4 127 3.5 2.5 3.0 1.0 158 chr3R 7034689 intergenic not near genes chr3R 7034768 intergenic not near genes chr3R 7034847 intergenic not near genes chr3R_4_7030001 chr3R_7030001 D4-c1 1804 chr3R 7103285 7103314 chr3R 7103362 7103390 10 77 5.5 2.5 4.0 2.0 105 chr3R 7103285 intron Alh - chr3R 7103338 intron Alh - chr3R 7103390 intron Alh - chr3R_10_7100001 chr3R_7100001 D4-c1 1805 chr3R 7126502 7126533 chr3R 7126598 7126629 5 96 3.0 2.5 2.8 1.3 127 chr3R 7126502 3` UTR,3` UTR CG10098 +,CG10068 - chr3R 7126566 3` UTR CG10068 - chr3R 7126629 3` UTR CG10068 - chr3R_5_7125001 chr3R_7125001 D4-c1 1806 chr3R 7210604 7210618 chr3R 7210691 7210705 6 87 0.0 4.5 2.2 1.9 101 chr3R 7210604 intergenic not near genes chr3R 7210654 intergenic not near genes chr3R 7210705 intergenic not near genes chr3R_6_7210001 chr3R_7210001 D4-c1 1807 chr3R 7217455 7217485 chr3R 7217677 7217707 9 222 4.0 3.0 3.5 2.0 252 chr3R 7217455 intergenic CG14605 -,CG14606 - chr3R 7217581 intergenic CG14605 -,CG14606 - chr3R 7217707 3` UTR CG14605 - chr3R_9_7215001 chr3R_7215001 D4-c1 1808 chr3R 7252411 7252427 chr3R 7252499 7252515 4 88 4.5 3.5 4.0 0.8 104 chr3R 7252411 3` UTR Gld - chr3R 7252463 3` UTR Gld - chr3R 7252515 3` UTR Gld - chr3R_4_7250001 chr3R_7250001 D4-c1 1809 chr3R 7410604 7410614 chr3R 7410687 7410697 6 83 2.0 5.0 3.5 1.3 93 chr3R 7410604 intergenic not near genes chr3R 7410650 intergenic not near genes chr3R 7410697 intergenic not near genes chr3R_6_7410001 chr3R_7410001 D4-c1 1810 chr3R 7426532 7426565 chr3R 7426639 7426672 22 107 4.5 4.0 4.2 4.2 140 chr3R 7426532 intergenic not near genes chr3R 7426602 intergenic not near genes chr3R 7426672 intergenic not near genes chr3R_22_7425001 chr3R_7425001 D4-c1 1811 chr3R 7444954 7444976 chr3R 7445135 7445157 7 181 4.5 1.5 3.0 1.8 203 chr3R 7444954 intergenic not near genes chr3R 7445056 intergenic not near genes chr3R 7445157 intergenic not near genes chr3R_7_7445001 chr3R_7445001 D4-c1 1812 chr3R 7446907 7446927 chr3R 7446997 7447017 8 90 1.5 1.5 1.5 3.2 110 chr3R 7446907 intergenic not near genes chr3R 7446962 intergenic not near genes chr3R 7447017 intergenic not near genes chr3R_8_7445001 chr3R_7445001 D4-c1 1813 chr3R 7447991 7448012 chr3R 7448070 7448091 11 79 5.0 3.5 4.2 2.1 100 chr3R 7447991 intergenic not near genes chr3R 7448041 intergenic not near genes chr3R 7448091 intergenic not near genes chr3R_11_7445001 chr3R_7445001 D4-c1 1814 chr3R 7617996 7618010 chr3R 7618089 7618103 7 93 3.0 6.0 4.5 1.3 107 chr3R 7617996 intron CG34127 - chr3R 7618050 intron CG34127 - chr3R 7618103 intron CG34127 - chr3R_7_7615001 chr3R_7615001 D4-c1 1815 chr3R 7621529 7621558 chr3R 7621621 7621649 5 91 4.0 3.0 3.5 1.1 120 chr3R 7621529 intron CG34127 - chr3R 7621589 intron CG34127 - chr3R 7621649 intron CG34127 - chr3R_5_7620001 chr3R_7620001 D4-c1 1816 chr3R 7726153 7726190 chr3R 7726231 7726268 13 78 4.5 3.5 4.0 2.6 115 chr3R 7726153 intergenic not near genes chr3R 7726210 intergenic not near genes chr3R 7726268 intergenic not near genes chr3R_13_7725001 chr3R_7725001 D4-c1 1817 chr3R 7729463 7729498 chr3R 7737402 7737437 Stalker2 20 7939 6.5 5.0 5.8 2.9 7974 chr3R 7729463 intergenic not near genes chr3R 7733450 intergenic not near genes chr3R 7737437 intergenic not near genes chr3R_20_7730001 chr3R_7730001 D4-c1 1818 chr3R 7973316 7973345 chr3R 7974379 7974408 1360 12 1063 6.5 6.0 6.2 1.7 1092 chr3R 7973316 intergenic not near genes chr3R 7973862 intergenic not near genes chr3R 7974408 3` UTR CD98hc - chr3R_12_7970001 chr3R_7970001 D4-c1 1819 chr3R 8070909 8070929 chr3R 8070991 8071011 8 81 7.5 8.5 8.0 0.9 102 chr3R 8070909 intron mAChR-B + chr3R 8070960 intron mAChR-B + chr3R 8071011 intron mAChR-B + chr3R_8_8070001 chr3R_8070001 D4-c1 1820 chr3R 8082584 8082595 chr3R 8082662 8082673 5 78 4.0 8.0 6.0 0.7 89 chr3R 8082584 intron mAChR-B + chr3R 8082628 intron mAChR-B + chr3R 8082673 intron mAChR-B + chr3R_5_8080001 chr3R_8080001 D4-c1 1821 chr3R 8090269 8090301 chr3R 8090447 8090479 14 178 6.0 5.5 5.8 2.1 210 chr3R 8090269 5` UTR CR44330 + chr3R 8090374 intergenic CR44330 + chr3R 8090479 intergenic CR44330 + chr3R_14_8090001 chr3R_8090001 D4-c1 1822 chr3R 8090568 8090571 chr3R 8094043 8094049 297 4 3477 8.0 14.5 11.2 0.3 3481 chr3R 8090568 intergenic CR44330 + chr3R 8092308 intergenic not near genes chr3R 8094049 intergenic CG7900 + chr3R_4_8090001 chr3R_8090001 D4-c1 1823 chr3R 8094405 8094437 chr3R 8099711 8099743 Transpac 12 5306 4.0 5.5 4.8 2.1 5338 chr3R 8094405 intron CG7900 + chr3R 8097074 intron CG7900 + chr3R 8099743 intron CG7900 + chr3R_12_8095001 chr3R_8095001 D4-c1 1824 chr3R 8101770 8101788 chr3R 8104855 8104873 G2 10 3085 7.0 6.5 6.8 1.3 3103 chr3R 8101770 exon CG7900 + chr3R 8103322 intron CG7900 + chr3R 8104873 3` UTR CG7900 + chr3R_10_8100001 chr3R_8100001 D4-c1 1825 chr3R 8107385 8107416 chr3R 8107520 8107551 8 135 4.0 3.5 3.8 1.7 166 chr3R 8107385 intron puc + chr3R 8107468 intron puc + chr3R 8107551 intron puc + chr3R_8_8105001 chr3R_8105001 D4-c1 1826 chr3R 8207556 8207588 chr3R 8208402 8208434 F-element 9 846 2.0 8.0 5.0 1.5 878 chr3R 8207556 intergenic not near genes chr3R 8207995 intergenic not near genes chr3R 8208434 intergenic not near genes chr3R_9_8205001 chr3R_8205001 D4-c1 1827 chr3R 8287362 8287385 chr3R 8287469 8287492 10 107 4.0 3.0 3.5 2.2 130 chr3R 8287362 5` UTR CR44318 + chr3R 8287427 intron CR44318 + chr3R 8287492 5` UTR CR44318 + chr3R_10_8285001 chr3R_8285001 D4-c1 1828 chr3R 8287386 8287386 chr3R 22081601 22081601 4 13794215 4.0 0.5 2.2 1.2 13794215 chr3R 8287386 intron CR44318 + chr3R 15184494 intron Gyc88E + chr3R 22081601 intron CG13408 + chr3R_4_15180001 chr3R_15180001 D4-c1 1829 chr3R 8287387 8287397 chr3R 8287494 8287504 4 107 1.0 8.0 4.5 0.7 117 chr3R 8287387 intron CR44318 + chr3R 8287446 5` UTR CR44318 + chr3R 8287504 5` UTR CR44318 + chr3R_4_8285001 chr3R_8285001 D4-c1 1830 chr3R 8328383 8328416 chr3R 8328461 8328494 10 78 5.0 7.0 6.0 1.4 111 chr3R 8328383 intron Poxm - chr3R 8328438 intron Poxm - chr3R 8328494 intron Poxm - chr3R_10_8325001 chr3R_8325001 D4-c1 1831 chr3R 8339246 8339247 chr3R 21907534 21907536 17 13568289 22.5 29.0 25.8 0.6 13568290 chr3R 8339246 intergenic not near genes chr3R 15123391 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_17_15120001 chr3R_15120001 D4-c1 1832 chr3R 8355925 8355952 chr3R 8358952 8358980 10 3028 12.0 25.5 18.8 0.5 3055 chr3R 8355925 intergenic not near genes chr3R 8357452 5` UTR stck + chr3R 8358980 intron stck + chr3R_10_8355001 chr3R_8355001 D4-c1 1833 chr3R 8355846 8355872 chr3R 8359312 8359338 21 3466 32.0 55.0 43.5 0.5 3492 chr3R 8355846 intergenic not near genes chr3R 8357592 intron stck + chr3R 8359338 exon stck + chr3R_21_8355001 chr3R_8355001 D4-c1 1834 chr3R 8360630 8360664 chr3R 8365164 8365198 18 4534 29.5 49.0 39.2 0.4 4568 chr3R 8360630 exon CG9684 - chr3R 8362914 exon CG7963 + chr3R 8365198 exon CG45263 - chr3R_18_8360001 chr3R_8360001 D4-c1 1835 chr3R 8403004 8403035 chr3R 8412171 8412201 roo 16 9166 7.0 6.5 6.8 2.1 9197 chr3R 8403004 intron CG45263 - chr3R 8407602 intron CG45263 - chr3R 8412201 intron CG45263 - chr3R_16_8405001 chr3R_8405001 D4-c1 1836 chr3R 8545157 8545192 chr3R 8545243 8545278 26 85 5.0 5.5 5.2 4.2 121 chr3R 8545157 intergenic not near genes chr3R 8545218 intergenic CR45575 + chr3R 8545278 intergenic CR45575 + chr3R_26_8545001 chr3R_8545001 D4-c1 1837 chr3R 8570476 8570499 chr3R 8575112 8575134 HMS-Beagle 10 4636 5.5 2.0 3.8 2.1 4658 chr3R 8570476 intergenic not near genes chr3R 8572805 intergenic not near genes chr3R 8575134 intergenic not near genes chr3R_10_8570001 chr3R_8570001 D4-c1 1838 chr3R 8601768 8601799 chr3R 8610922 8610953 roo 9 9154 7.0 3.5 5.2 1.5 9185 chr3R 8601768 intron 5-HT2B + chr3R 8606360 intron 5-HT2B + chr3R 8610953 intron 5-HT2B + chr3R_9_8605001 chr3R_8605001 D4-c1 1839 chr3R 8621538 8621554 chr3R 8621616 8621632 8 78 9.5 7.0 8.2 0.9 94 chr3R 8621538 intron 5-HT2B + chr3R 8621585 intron 5-HT2B + chr3R 8621632 intron 5-HT2B + chr3R_8_8620001 chr3R_8620001 D4-c1 1840 chr3R 8638063 8638093 chr3R 8638175 8638205 11 112 2.0 6.5 4.2 2.1 142 chr3R 8638063 intergenic not near genes chr3R 8638134 intergenic not near genes chr3R 8638205 intergenic not near genes chr3R_11_8635001 chr3R_8635001 D4-c1 1841 chr3R 8685294 8685313 chr3R 8685395 8685414 8 101 1.5 3.0 2.2 2.5 120 chr3R 8685294 intron CR44937 - chr3R 8685354 intron CR44937 - chr3R 8685414 intron CR44937 - chr3R_8_8685001 chr3R_8685001 D4-c1 1842 chr3R 8707353 8707387 chr3R 8709795 8709829 jockey 14 2442 6.5 4.5 5.5 2.2 2476 chr3R 8707353 intergenic not near genes chr3R 8708591 intergenic not near genes chr3R 8709829 intergenic not near genes chr3R_14_8705001 chr3R_8705001 D4-c1 1843 chr3R 8917887 8917912 chr3R 8917968 8917993 15 80 4.0 6.0 5.0 2.5 106 chr3R 8917887 intron pyd - chr3R 8917940 intron pyd - chr3R 8917993 intron pyd - chr3R_15_8915001 chr3R_8915001 D4-c1 1844 chr3R 9036712 9036745 chr3R 9036809 9036842 11 97 1.0 3.5 2.2 3.4 130 chr3R 9036712 intron neur - chr3R 9036777 intron neur - chr3R 9036842 intron neur - chr3R_11_9035001 chr3R_9035001 D4-c1 1845 chr3R 9066188 9066221 chr3R 9066265 9066298 21 77 7.0 5.5 6.2 2.9 110 chr3R 9066188 exon Ada + chr3R 9066243 exon Ada + chr3R 9066298 3` UTR Ada + chr3R_21_9065001 chr3R_9065001 D4-c1 1846 chr3R 9101836 9101869 chr3R 9101935 9101968 11 99 4.5 1.0 2.8 2.9 132 chr3R 9101836 intron pum - chr3R 9101902 intron pum - chr3R 9101968 intron pum - chr3R_11_9100001 chr3R_9100001 D4-c1 1847 chr3R 9108869 9108884 chr3R 9108946 9108961 11 77 4.0 2.5 3.2 2.6 92 chr3R 9108869 intron pum - chr3R 9108915 intron pum - chr3R 9108961 intron pum - chr3R_11_9105001 chr3R_9105001 D4-c1 1848 chr3R 9141139 9141167 chr3R 9141224 9141252 14 85 5.5 6.0 5.8 2.1 113 chr3R 9141139 intron pum - chr3R 9141196 intron pum - chr3R 9141252 intron pum - chr3R_14_9140001 chr3R_9140001 D4-c1 1849 chr3R 9143043 9143054 chr3R 9143185 9143195 4 142 1.5 12.5 7.0 0.5 152 chr3R 9143043 intron pum - chr3R 9143119 intron pum - chr3R 9143195 intron pum - chr3R_4_9140001 chr3R_9140001 D4-c1 1850 chr3R 9195371 9195387 chr3R 9195472 9195488 4 101 1.5 5.0 3.2 1.0 117 chr3R 9195371 intron pum - chr3R 9195430 intron pum - chr3R 9195488 intron pum - chr3R_4_9195001 chr3R_9195001 D4-c1 1851 chr3R 9211204 9211217 chr3R 9211424 9211437 9 220 3.5 2.0 2.8 2.4 233 chr3R 9211204 intron pum - chr3R 9211320 intron pum - chr3R 9211437 intron pum - chr3R_9_9210001 chr3R_9210001 D4-c1 1852 chr3R 9214794 9214820 chr3R 9214910 9214936 14 116 3.0 6.5 4.8 2.4 142 chr3R 9214794 intron pum - chr3R 9214865 intron pum - chr3R 9214936 intron pum - chr3R_14_9210001 chr3R_9210001 D4-c1 1853 chr3R 9278777 9278811 chr3R 9284038 9284072 Rt1a 18 5261 5.5 7.5 6.5 2.4 5295 chr3R 9278777 intergenic not near genes chr3R 9281424 intergenic not near genes chr3R 9284072 intergenic not near genes chr3R_18_9280001 chr3R_9280001 D4-c1 1854 chr3R 9304525 9304536 chr3R 9311813 9311822 Stalker4 6 7288 7.5 4.0 5.8 0.9 7297 chr3R 9304525 intron CG8861 - chr3R 9308174 intron CG8861 - chr3R 9311822 intron CG8861 - chr3R_6_9305001 chr3R_9305001 D4-c1 1855 chr3R 9319575 9319607 chr3R 9320011 9320043 jockey 10 436 3.5 9.0 6.2 1.4 468 chr3R 9319575 intron CG8861 - chr3R 9319809 intron CG8861 - chr3R 9320043 intron CG8861 - chr3R_10_9315001 chr3R_9315001 D4-c1 1856 chr3R 9361820 9361846 chr3R 9362062 9362086 pogo 8 242 3.0 5.5 4.2 1.5 266 chr3R 9361820 3` UTR CG45050 + chr3R 9361953 3` UTR CG45050 + chr3R 9362086 3` UTR CG45050 + chr3R_8_9360001 chr3R_9360001 D4-c1 1857 chr3R 9382820 9382847 chr3R 9382946 9382973 12 126 2.0 2.0 2.0 4.0 153 chr3R 9382820 intron FER - chr3R 9382896 intron FER - chr3R 9382973 intron FER - chr3R_12_9380001 chr3R_9380001 D4-c1 1858 chr3R 9434690 9434723 chr3R 9434778 9434811 10 88 6.5 4.0 5.2 1.6 121 chr3R 9434690 intron ps + chr3R 9434750 intron ps + chr3R 9434811 intron ps + chr3R_10_9430001 chr3R_9430001 D4-c1 1859 chr3R 9582303 9582336 chr3R 9582387 9582420 7 80 1.5 2.0 1.8 2.5 117 chr3R 9582303 intron CG8301 + chr3R 9582362 intron CG8301 + chr3R 9582420 intron CG8301 + chr3R_7_9580001 chr3R_9580001 D4-c1 1860 chr3R 9611875 9611905 chr3R 9611958 9611988 8 83 4.0 0.0 2.0 2.7 113 chr3R 9611875 intron CG8312 + chr3R 9611932 intron CG8312 + chr3R 9611988 intron CG8312 + chr3R_8_9610001 chr3R_9610001 D4-c1 1861 chr3R 9699971 9700003 chr3R 9700061 9700093 1360 18 89 5.0 10.0 7.5 2.1 122 chr3R 9699971 intron Unc-115a - chr3R 9700032 intron Unc-115a - chr3R 9700093 intron Unc-115a - chr3R_18_9700001 chr3R_9700001 D4-c1 1862 chr3R 9740548 9740555 chr3R 9740635 9740642 5 87 2.5 2.5 2.5 1.4 94 chr3R 9740548 intergenic Pnn + chr3R 9740595 intergenic Pnn + chr3R 9740642 intergenic Pnn + chr3R_5_9740001 chr3R_9740001 D4-c1 1863 chr3R 9829403 9829439 chr3R 9829489 9829525 14 86 2.0 2.5 2.2 4.4 122 chr3R 9829403 intron Teh1 - chr3R 9829464 intron Teh1 - chr3R 9829525 intron Teh1 - chr3R_14_9825001 chr3R_9825001 D4-c1 1864 chr3R 9997420 9997455 chr3R 9997507 9997542 18 85 8.0 2.0 5.0 3.0 122 chr3R 9997420 5` UTR Spn85F + chr3R 9997481 5` UTR Spn85F + chr3R 9997542 exon Spn85F + chr3R_18_9995001 chr3R_9995001 D4-c1 1865 chr3R 10062246 10062276 chr3R 10062370 10062400 14 124 4.0 5.5 4.8 2.4 154 chr3R 10062246 intergenic CR45205 -,CG33630 + chr3R 10062323 intergenic CG33630 +,CR45205 - chr3R 10062400 intergenic CG33630 +,CR45205 - chr3R_14_10060001 chr3R_10060001 D4-c1 1866 chr3R 10073771 10073800 chr3R 10073879 10073910 13 110 3.0 3.5 3.2 3.1 139 chr3R 10073771 intergenic nerfin-2 +,CG5361 - chr3R 10073840 3` UTR CG5361 - chr3R 10073910 exon CG5361 - chr3R_13_10070001 chr3R_10070001 D4-c1 1867 chr3R 10228123 10228157 chr3R 10228200 10228234 15 77 4.5 2.0 3.2 3.6 111 chr3R 10228123 intron CG42795 + chr3R 10228178 intron CG42795 + chr3R 10228234 intron CG42795 + chr3R_15_10225001 chr3R_10225001 D4-c1 1868 chr3R 10231780 10231815 chr3R 10237358 10237393 mdg3 12 5578 2.5 6.0 4.2 2.3 5613 chr3R 10231780 intron CG42795 + chr3R 10234586 intron CG42795 + chr3R 10237393 intron CG42795 + chr3R_12_10230001 chr3R_10230001 D4-c1 1869 chr3R 10255378 10255385 chr3R 10260818 10260826 I-element 4 5441 6.5 5.5 6.0 0.6 5448 chr3R 10255378 exon Sirt6 - chr3R 10258102 intron Sirt6 - chr3R 10260826 exon Sirt6 - chr3R_4_10255001 chr3R_10255001 D4-c1 1870 chr3R 10403031 10403063 chr3R 10403113 10403144 8 82 3.5 2.5 3.0 2.0 113 chr3R 10403031 3` UTR CG6325 - chr3R 10403088 3` UTR CG6325 - chr3R 10403144 3` UTR CG6325 - chr3R_8_10400001 chr3R_10400001 D4-c1 1871 chr3R 6090420 6090420 chr3R 10451877 10451881 8 4361458 17.0 17.5 17.2 0.4 4361461 chr3R 6090420 intron Gasp - chr3R 8271150 intergenic not near genes chr3R 10451881 intergenic not near genes chr3R_8_8270001 chr3R_8270001 D4-c1 1872 chr3R 10531868 10531898 chr3R 10531950 10531980 10 82 4.0 0.5 2.2 3.1 112 chr3R 10531868 intron hth - chr3R 10531924 intron hth - chr3R 10531980 intron hth - chr3R_10_10530001 chr3R_10530001 D4-c1 1873 chr3R 10593426 10593454 chr3R 10593514 10593539 5 87 5.5 3.0 4.2 1.0 113 chr3R 10593426 intron hth - chr3R 10593482 intron hth - chr3R 10593539 intron hth - chr3R_5_10590001 chr3R_10590001 D4-c1 1874 chr3R 10651807 10651836 chr3R 10651907 10651926 13 99 3.0 4.5 3.8 2.7 119 chr3R 10651807 intergenic not near genes chr3R 10651866 intergenic not near genes chr3R 10651926 intergenic not near genes chr3R_13_10650001 chr3R_10650001 D4-c1 1875 chr3R 10671536 10671569 chr3R 10671634 10671667 15 98 4.5 4.5 4.5 2.7 131 chr3R 10671536 intergenic not near genes chr3R 10671602 intergenic not near genes chr3R 10671667 intergenic not near genes chr3R_15_10670001 chr3R_10670001 D4-c1 1876 chr3R 10681989 10682005 chr3R 10682095 10682102 5 104 5.0 0.0 2.5 1.4 113 chr3R 10681989 intergenic not near genes chr3R 10682046 intergenic not near genes chr3R 10682102 intergenic not near genes chr3R_5_10680001 chr3R_10680001 D4-c1 1877 chr3R 10732843 10732875 chr3R 10732929 10732961 14 86 2.5 4.0 3.2 3.3 118 chr3R 10732843 intergenic not near genes chr3R 10732902 intergenic not near genes chr3R 10732961 intergenic not near genes chr3R_14_10730001 chr3R_10730001 D4-c1 1878 chr3R 10804173 10804208 chr3R 10811706 10811741 17.6 21 7533 2.5 4.5 3.5 4.7 7568 chr3R 10804173 intergenic CG14692 - chr3R 10807957 intergenic not near genes chr3R 10811741 3` UTR CG14693 - chr3R_21_10805001 chr3R_10805001 D4-c1 1879 chr3R 10817216 10817250 chr3R 10817300 10817334 10 84 4.5 5.0 4.8 1.7 118 chr3R 10817216 3` UTR CG4089 + chr3R 10817275 3` UTR CG4089 + chr3R 10817334 3` UTR CG4089 + chr3R_10_10815001 chr3R_10815001 D4-c1 1880 chr3R 10868603 10868608 chr3R 10868682 10868687 4 78 9.0 10.0 9.5 0.4 84 chr3R 10868603 5` UTR SelR - chr3R 10868645 intergenic SelR -,Tsp86D + chr3R 10868687 intergenic Tsp86D +,SelR - chr3R_4_10865001 chr3R_10865001 D4-c1 1881 chr3R 10868609 10868624 chr3R 10868671 10868703 11 68 6.0 6.0 6.0 1.6 94 chr3R 10868609 5` UTR SelR - chr3R 10868656 intergenic SelR -,Tsp86D + chr3R 10868703 intergenic Tsp86D +,SelR - chr3R_11_10865001 chr3R_10865001 D4-c1 1882 chr3R 10870862 10870895 chr3R 10870944 10870977 14 82 6.0 3.5 4.8 2.4 115 chr3R 10870862 intergenic Fdh -,Tsp86D + chr3R 10870920 3` UTR Fdh - chr3R 10870977 3` UTR Fdh - chr3R_14_10870001 chr3R_10870001 D4-c1 1883 chr3R 10900453 10900473 chr3R 10900531 10900551 8 78 2.5 6.5 4.5 1.5 98 chr3R 10900453 intergenic not near genes chr3R 10900502 intergenic not near genes chr3R 10900551 intergenic not near genes chr3R_8_10900001 chr3R_10900001 D4-c1 1884 chr3R 10924744 10924778 chr3R 10924836 10924870 14 92 4.0 5.5 4.8 2.4 126 chr3R 10924744 intergenic not near genes chr3R 10924807 intergenic not near genes chr3R 10924870 intergenic not near genes chr3R_14_10920001 chr3R_10920001 D4-c1 1885 chr3R 10963560 10963588 chr3R 10963655 10963683 8 95 4.0 5.5 4.8 1.4 123 chr3R 10963560 intergenic not near genes chr3R 10963622 intergenic not near genes chr3R 10963683 intergenic not near genes chr3R_8_10960001 chr3R_10960001 D4-c1 1886 chr3R 11010750 11010768 chr3R 11010846 11010863 6 96 4.0 0.0 2.0 2.0 113 chr3R 11010750 intron CG34114 + chr3R 11010806 intron CG34114 + chr3R 11010863 intron CG34114 + chr3R_6_11010001 chr3R_11010001 D4-c1 1887 chr3R 11032849 11032885 chr3R 11033103 11033139 14 254 5.0 6.0 5.5 2.2 290 chr3R 11032849 intron CG34114 + chr3R 11032994 intron CG34114 + chr3R 11033139 intron CG34114 + chr3R_14_11030001 chr3R_11030001 D4-c1 1888 chr3R 11102681 11102715 chr3R 11102771 11102805 11 90 5.0 3.0 4.0 2.2 124 chr3R 11102681 intergenic not near genes chr3R 11102743 intergenic not near genes chr3R 11102805 intergenic not near genes chr3R_11_11100001 chr3R_11100001 D4-c1 1889 chr3R 11197988 11198013 chr3R 11198088 11198113 11 100 4.5 6.0 5.2 1.8 125 chr3R 11197988 intron cu + chr3R 11198050 intron cu + chr3R 11198113 intron cu + chr3R_11_11195001 chr3R_11195001 D4-c1 1890 chr3R 11379233 11379269 chr3R 11388389 11388425 roo 14 9156 5.0 4.5 4.8 2.4 9192 chr3R 11379233 intron pros + chr3R 11383829 intron pros + chr3R 11388425 intron pros + chr3R_14_11380001 chr3R_11380001 D4-c1 1891 chr3R 11442344 11442356 chr3R 11442529 11442536 6 185 8.0 6.5 7.2 0.7 192 chr3R 11442344 intron,intron sals -,CG17230 + chr3R 11442440 intron,intron sals -,CG17230 + chr3R 11442536 intron,intron sals -,CG17230 + chr3R_6_11440001 chr3R_11440001 D4-c1 1892 chr3R 11476376 11476381 chr3R 11476465 11476470 4 89 10.5 7.0 8.8 0.4 94 chr3R 11476376 intergenic not near genes chr3R 11476423 intergenic not near genes chr3R 11476470 intergenic not near genes chr3R_4_11475001 chr3R_11475001 D4-c1 1893 chr3R 11476382 11476398 chr3R 11476464 11476487 15 87 3.0 6.5 4.8 2.6 105 chr3R 11476382 intergenic not near genes chr3R 11476434 intergenic not near genes chr3R 11476487 intergenic not near genes chr3R_15_11475001 chr3R_11475001 D4-c1 1894 chr3R 11545879 11545905 chr3R 11545997 11546023 7 118 4.0 2.0 3.0 1.8 144 chr3R 11545879 intergenic not near genes chr3R 11545951 intergenic not near genes chr3R 11546023 intergenic not near genes chr3R_7_11545001 chr3R_11545001 D4-c1 1895 chr3R 11694722 11694752 chr3R 11694816 11694846 9 94 3.5 1.5 2.5 2.6 124 chr3R 11694722 intergenic Fer3 - chr3R 11694784 intergenic Fer3 - chr3R 11694846 intergenic not near genes chr3R_9_11690001 chr3R_11690001 D4-c1 1896 chr3R 11695742 11695768 chr3R 11695824 11695850 9 82 3.5 4.5 4.0 1.8 108 chr3R 11695742 intergenic not near genes chr3R 11695796 intergenic not near genes chr3R 11695850 intergenic not near genes chr3R_9_11695001 chr3R_11695001 D4-c1 1897 chr3R 11757739 11757766 chr3R 11757841 11757868 5 102 5.5 5.5 5.5 0.8 129 chr3R 11757739 intron Lk6 - chr3R 11757804 intron Lk6 - chr3R 11757868 intron Lk6 - chr3R_5_11755001 chr3R_11755001 D4-c1 1898 chr3R 11841061 11841099 chr3R 11846253 11846259 BS 18 5190 5.5 5.5 5.5 2.8 5198 chr3R 11841061 intron CG6959 - chr3R 11843660 intron CG6959 - chr3R 11846259 intron CG6959 - chr3R_18_11840001 chr3R_11840001 D4-c1 1899 chr3R 11879343 11879375 chr3R 11885214 11885246 18 5872 47.5 46.5 47.0 0.4 5903 chr3R 11879343 exon sad + chr3R 11882294 exon CG6962 - chr3R 11885246 intron,exon CG31368 +,mthl5 - chr3R_18_11880001 chr3R_11880001 D4-c1 1900 chr3R 11920972 11921002 chr3R 11921070 11921100 22 97 7.5 5.0 6.2 3.1 128 chr3R 11920972 intron Cad87A - chr3R 11921036 intron Cad87A - chr3R 11921100 intron Cad87A - chr3R_22_11920001 chr3R_11920001 D4-c1 1901 chr3R 12022882 12022912 chr3R 12025060 12025090 pogo 12 2176 5.0 10.0 7.5 1.4 2208 chr3R 12022882 intergenic not near genes chr3R 12023986 intergenic not near genes chr3R 12025090 intergenic not near genes chr3R_12_12020001 chr3R_12020001 D4-c1 1902 chr3R 12064278 12064306 chr3R 12064361 12064389 8 83 1.5 2.5 2.0 2.7 111 chr3R 12064278 intergenic not near genes chr3R 12064334 intergenic not near genes chr3R 12064389 intergenic not near genes chr3R_8_12060001 chr3R_12060001 D4-c1 1903 chr3R 12080865 12080897 chr3R 12080943 12080976 11 79 4.0 9.0 6.5 1.5 111 chr3R 12080865 intron CG14741 - chr3R 12080920 intron CG14741 - chr3R 12080976 intron CG14741 - chr3R_11_12080001 chr3R_12080001 D4-c1 1904 chr3R 12097242 12097273 chr3R 12097347 12097377 14 105 3.0 5.0 4.0 2.8 135 chr3R 12097242 intron dpr17 + chr3R 12097310 intron dpr17 + chr3R 12097377 intron dpr17 + chr3R_14_12095001 chr3R_12095001 D4-c1 1905 chr3R 12103982 12104009 chr3R 12105423 12105450 10 1441 8.0 5.0 6.5 1.3 1468 chr3R 12103982 intron dpr17 + chr3R 12104716 intron dpr17 + chr3R 12105450 intron dpr17 + chr3R_10_12100001 chr3R_12100001 D4-c1 1906 chr3R 12307473 12307494 chr3R 12307575 12307585 11 101 5.5 1.0 3.2 2.6 112 chr3R 12307473 intergenic not near genes chr3R 12307529 intergenic not near genes chr3R 12307585 intergenic not near genes chr3R_11_12305001 chr3R_12305001 D4-c1 1907 chr3R 12358893 12358927 chr3R 12358973 12359007 10 80 4.5 3.5 4.0 2.0 114 chr3R 12358893 intergenic not near genes chr3R 12358950 intergenic not near genes chr3R 12359007 intergenic not near genes chr3R_10_12355001 chr3R_12355001 D4-c1 1908 chr3R 12392890 12392900 chr3R 12392991 12393001 5 100 6.5 12.5 9.5 0.5 111 chr3R 12392890 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R 12392946 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R 12393001 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R_5_12390001 chr3R_12390001 D4-c1 1909 chr3R 12459748 12459776 chr3R 12459845 12459873 25 97 6.0 7.0 6.5 3.3 125 chr3R 12459748 exon CG5961 - chr3R 12459810 exon CG5961 - chr3R 12459873 exon CG5961 - chr3R_25_12455001 chr3R_12455001 D4-c1 1910 chr3R 12462424 12462450 chr3R 12462521 12462527 14 95 4.0 1.5 2.8 3.7 103 chr3R 12462424 intergenic CG12267 +,CG5608 - chr3R 12462476 intergenic CG12267 +,CG5608 - chr3R 12462527 intergenic CG5608 -,CG12267 + chr3R_14_12460001 chr3R_12460001 D4-c1 1911 chr3R 12553534 12553546 chr3R 12553606 12553634 5 83 0.5 7.5 4.0 1.0 100 chr3R 12553534 intron Octbeta2R - chr3R 12553584 intron Octbeta2R - chr3R 12553634 intron Octbeta2R - chr3R_5_12550001 chr3R_12550001 D4-c1 1912 chr3R 12578396 12578429 chr3R 12578473 12578504 19 76 2.0 5.5 3.8 4.0 108 chr3R 12578396 intron Octbeta2R - chr3R 12578450 intron Octbeta2R - chr3R 12578504 intron Octbeta2R - chr3R_19_12575001 chr3R_12575001 D4-c1 1913 chr3R 12599002 12599032 chr3R 12599143 12599167 15 140 6.5 5.0 5.8 2.2 165 chr3R 12599002 intergenic not near genes chr3R 12599084 intergenic not near genes chr3R 12599167 intergenic not near genes chr3R_15_12595001 chr3R_12595001 D4-c1 1914 chr3R 12666771 12666802 chr3R 12666899 12666930 11 127 3.5 5.0 4.2 2.1 159 chr3R 12666771 intron CG14395 + chr3R 12666850 intron CG14395 + chr3R 12666930 intron CG14395 + chr3R_11_12665001 chr3R_12665001 D4-c1 1915 chr3R 12694308 12694339 chr3R 12694386 12694409 10 77 2.5 6.0 4.2 1.9 101 chr3R 12694308 3` UTR CG14391 - chr3R 12694358 exon CG14391 - chr3R 12694409 exon CG14391 - chr3R_10_12690001 chr3R_12690001 D4-c1 1916 chr3R 12720670 12720703 chr3R 12720747 12720780 20 77 4.0 7.0 5.5 3.1 110 chr3R 12720670 intron Men - chr3R 12720725 intron Men - chr3R 12720780 intron Men - chr3R_20_12720001 chr3R_12720001 D4-c1 1917 chr3R 12733473 12733505 chr3R 12733551 12733583 19 77 7.5 10.5 9.0 1.9 110 chr3R 12733473 intergenic not near genes chr3R 12733528 intergenic not near genes chr3R 12733583 intergenic not near genes chr3R_19_12730001 chr3R_12730001 D4-c1 1918 chr3R 12753020 12753056 chr3R 12753106 12753142 15 86 2.0 3.5 2.8 3.9 122 chr3R 12753020 intron beat-Vc - chr3R 12753081 intron beat-Vc - chr3R 12753142 intron beat-Vc - chr3R_15_12750001 chr3R_12750001 D4-c1 1919 chr3R 12763121 12763153 chr3R 12763199 12763231 10 78 0.0 3.5 1.8 3.6 110 chr3R 12763121 intron beat-Vc - chr3R 12763176 intron beat-Vc - chr3R 12763231 intron beat-Vc - chr3R_10_12760001 chr3R_12760001 D4-c1 1920 chr3R 12782316 12782334 chr3R 12782658 12782676 7 342 6.0 2.5 4.2 1.3 360 chr3R 12782316 intron beat-Vc - chr3R 12782496 intron beat-Vc - chr3R 12782676 intron beat-Vc - chr3R_7_12780001 chr3R_12780001 D4-c1 1921 chr3R 12833524 12833552 chr3R 12833712 12833740 10 188 4.5 3.5 4.0 2.0 216 chr3R 12833524 intergenic not near genes chr3R 12833632 intergenic not near genes chr3R 12833740 intergenic not near genes chr3R_10_12830001 chr3R_12830001 D4-c1 1922 chr3R 12866486 12866515 chr3R 12866638 12866667 16 152 3.5 2.5 3.0 4.0 181 chr3R 12866486 intergenic not near genes chr3R 12866576 intergenic not near genes chr3R 12866667 intergenic not near genes chr3R_16_12865001 chr3R_12865001 D4-c1 1923 chr3R 12880116 12880150 chr3R 12880193 12880227 18 77 5.0 3.5 4.2 3.5 111 chr3R 12880116 intergenic not near genes chr3R 12880172 intergenic not near genes chr3R 12880227 intergenic not near genes chr3R_18_12880001 chr3R_12880001 D4-c1 1924 chr3R 12883793 12883822 chr3R 12883913 12883942 17 120 4.0 4.5 4.2 3.3 149 chr3R 12883793 intergenic not near genes chr3R 12883868 intergenic not near genes chr3R 12883942 intergenic not near genes chr3R_17_12880001 chr3R_12880001 D4-c1 1925 chr3R 12904204 12904217 chr3R 12904288 12904301 6 84 12.0 3.5 7.8 0.7 97 chr3R 12904204 intergenic not near genes chr3R 12904252 intergenic not near genes chr3R 12904301 intergenic not near genes chr3R_6_12900001 chr3R_12900001 D4-c1 1926 chr3R 12920149 12920185 chr3R 12925353 12925377 copia 15 5203 3.5 4.5 4.0 3.0 5228 chr3R 12920149 intron beat-Vb + chr3R 12922763 intron beat-Vb + chr3R 12925377 intron beat-Vb + chr3R_15_12920001 chr3R_12920001 D4-c1 1927 chr3R 12960519 12960535 chr3R 12960592 12960614 7 78 4.0 4.0 4.0 1.4 95 chr3R 12960519 intron grsm - chr3R 12960566 intron grsm - chr3R 12960614 intron grsm - chr3R_7_12960001 chr3R_12960001 D4-c1 1928 chr3R 13059960 13059972 chr3R 13060156 13060168 5 196 3.5 4.0 3.8 1.0 208 chr3R 13059960 intron sim + chr3R 13060064 intron sim + chr3R 13060168 intron sim + chr3R_5_13060001 chr3R_13060001 D4-c1 1929 chr3R 13075358 13075370 chr3R 13075440 13075452 6 82 5.0 5.5 5.2 1.0 94 chr3R 13075358 intron sim + chr3R 13075405 intron sim + chr3R 13075452 intron sim + chr3R_6_13075001 chr3R_13075001 D4-c1 1930 chr3R 13120769 13120799 chr3R 13120847 13120877 20 78 4.0 3.0 3.5 4.4 108 chr3R 13120769 intron timeout + chr3R 13120823 intron timeout + chr3R 13120877 intron timeout + chr3R_20_13120001 chr3R_13120001 D4-c1 1931 chr3R 13135828 13135858 chr3R 13138004 13138034 pogo 9 2174 8.0 5.0 6.5 1.2 2206 chr3R 13135828 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13136931 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138034 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_9_13135001 chr3R_13135001 D4-c1 1932 chr3R 13143038 13143064 chr3R 13148615 13148641 mdg3 16 5575 7.5 10.5 9.0 1.6 5603 chr3R 13143038 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145840 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148641 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_16_13145001 chr3R_13145001 D4-c1 1933 chr3R 13195950 13195982 chr3R 13196046 13196078 27 95 4.0 2.5 3.2 6.4 128 chr3R 13195950 intergenic not near genes chr3R 13196014 intergenic not near genes chr3R 13196078 intergenic not near genes chr3R_27_13195001 chr3R_13195001 D4-c1 1934 chr3R 13205408 13205442 chr3R 13205490 13205524 17 81 3.0 3.5 3.2 4.0 116 chr3R 13205408 intergenic not near genes chr3R 13205466 intergenic not near genes chr3R 13205524 intergenic not near genes chr3R_17_13205001 chr3R_13205001 D4-c1 1935 chr3R 13294974 13294977 chr3R 13295064 13295067 4 90 13.5 16.5 15.0 0.2 93 chr3R 13294974 exon CG8773 + chr3R 13295020 exon CG8773 + chr3R 13295067 exon CG8773 + chr3R_4_13295001 chr3R_13295001 D4-c1 1936 chr3R 13302906 13302933 chr3R 13303038 13303065 21 131 10.5 6.5 8.5 2.2 159 chr3R 13302906 exon CG32473 + chr3R 13302986 exon CG32473 + chr3R 13303065 exon CG32473 + chr3R_21_13300001 chr3R_13300001 D4-c1 1937 chr3R 13314106 13314132 chr3R 13318895 13318921 Doc 7 4789 3.0 4.5 3.8 1.5 4815 chr3R 13314106 intergenic not near genes chr3R 13316514 intergenic not near genes chr3R 13318921 intergenic CG45080 - chr3R_7_13315001 chr3R_13315001 D4-c1 1938 chr3R 13323670 13323693 chr3R 13323873 13323896 11 203 3.5 4.0 3.8 2.3 226 chr3R 13323670 intergenic not near genes chr3R 13323783 intergenic not near genes chr3R 13323896 intergenic not near genes chr3R_11_13320001 chr3R_13320001 D4-c1 1939 chr3R 13336521 13336554 chr3R 13337748 13337781 13 1227 42.0 39.0 40.5 0.3 1260 chr3R 13336521 intergenic not near genes chr3R 13337151 intergenic not near genes chr3R 13337781 intergenic not near genes chr3R_13_13335001 chr3R_13335001 D4-c1 1940 chr3R 13363474 13363483 chr3R 13363571 13363580 8 97 0.5 3.0 1.8 2.9 106 chr3R 13363474 intron poly - chr3R 13363527 intron poly - chr3R 13363580 intron poly - chr3R_8_13360001 chr3R_13360001 D4-c1 1941 chr3R 13420976 13420992 chr3R 13421072 13421088 6 96 8.0 15.5 11.8 0.5 112 chr3R 13420976 exon Ir87a + chr3R 13421032 exon Ir87a + chr3R 13421088 exon Ir87a + chr3R_6_13420001 chr3R_13420001 D4-c1 1942 chr3R 13435396 13435418 chr3R 13435572 13435593 7 176 3.5 5.5 4.5 1.3 197 chr3R 13435396 intergenic yrt - chr3R 13435494 intergenic not near genes chr3R 13435593 intergenic not near genes chr3R_7_13435001 chr3R_13435001 D4-c1 1943 chr3R 13439577 13439598 chr3R 13439660 13439681 6 83 4.0 3.0 3.5 1.3 104 chr3R 13439577 intergenic CR42756 - chr3R 13439629 intergenic CR42756 - chr3R 13439681 intergenic CR42756 - chr3R_6_13435001 chr3R_13435001 D4-c1 1944 chr3R 13500985 13501013 chr3R 13503881 13503909 11 2894 5.0 0.5 2.8 2.9 2924 chr3R 13500985 intergenic not near genes chr3R 13502447 intergenic not near genes chr3R 13503909 intergenic not near genes chr3R_11_13500001 chr3R_13500001 D4-c1 1945 chr3R 13574597 13574604 chr3R 13574675 13574682 7 78 10.0 14.5 12.2 0.5 85 chr3R 13574597 intergenic CR43848 + chr3R 13574640 intergenic CR43848 + chr3R 13574682 intergenic CR43848 + chr3R_7_13570001 chr3R_13570001 D4-c1 1946 chr3R 13599054 13599088 chr3R 13599135 13599169 6 81 3.5 2.0 2.8 1.6 115 chr3R 13599054 intergenic not near genes chr3R 13599112 intergenic not near genes chr3R 13599169 intergenic not near genes chr3R_6_13595001 chr3R_13595001 D4-c1 1947 chr3R 13603056 13603069 chr3R 13603148 13603161 6 92 5.5 4.5 5.0 1.0 105 chr3R 13603056 intergenic not near genes chr3R 13603108 intergenic not near genes chr3R 13603161 intergenic not near genes chr3R_6_13600001 chr3R_13600001 D4-c1 1948 chr3R 13609559 13609579 chr3R 13609653 13609674 6 95 0.0 3.0 1.5 2.4 115 chr3R 13609559 intergenic CG9759 - chr3R 13609616 intergenic CG9759 - chr3R 13609674 intergenic CG9759 - chr3R_6_13605001 chr3R_13605001 D4-c1 1949 chr3R 13625700 13625723 chr3R 13625782 13625805 5 82 3.5 6.5 5.0 0.8 105 chr3R 13625700 intergenic not near genes chr3R 13625752 intergenic not near genes chr3R 13625805 intergenic not near genes chr3R_5_13625001 chr3R_13625001 D4-c1 1950 chr3R 13659725 13659847 chr3R 13659832 13659936 5 100 0.0 0.0 0.0 5.0 211 chr3R 13659725 intron Hrb87F - chr3R 13659830 intron Hrb87F - chr3R 13659936 intron Hrb87F - chr3R_5_13655001 chr3R_13655001 D4-c1 1951 chr3R 13693028 13693028 chr3R 21907534 21907536 14 8214507 16.0 29.0 22.5 0.6 8214508 chr3R 13693028 3` UTR flfl + chr3R 17800282 exon CG17803 - chr3R 21907536 intergenic CG6678 + chr3R_14_17800001 chr3R_17800001 D4-c1 1952 chr3R 13803897 13803903 chr3R 13804119 13804125 4 222 0.0 0.0 0.0 4.0 228 chr3R 13803897 intergenic not near genes chr3R 13804011 intergenic not near genes chr3R 13804125 intergenic not near genes chr3R_4_13800001 chr3R_13800001 D4-c1 1953 chr3R 13828846 13828869 chr3R 13828933 13828956 8 87 1.5 0.0 0.8 4.4 110 chr3R 13828846 intergenic CR43300 + chr3R 13828901 intergenic CR43300 + chr3R 13828956 intergenic not near genes chr3R_8_13825001 chr3R_13825001 D4-c1 1954 chr3R 13863678 13863712 chr3R 13863767 13863801 15 89 3.0 1.5 2.2 4.7 123 chr3R 13863678 intergenic not near genes chr3R 13863740 intergenic not near genes chr3R 13863801 intergenic not near genes chr3R_15_13860001 chr3R_13860001 D4-c1 1955 chr3R 13975371 13975406 chr3R 13975452 13975487 16 81 3.5 4.0 3.8 3.3 116 chr3R 13975371 intron rdx - chr3R 13975429 intron rdx - chr3R 13975487 intron rdx - chr3R_16_13975001 chr3R_13975001 D4-c1 1956 chr3R 14021647 14021680 chr3R 14023465 14023498 S-element 14 1818 4.5 2.0 3.2 3.3 1851 chr3R 14021647 intron rdx - chr3R 14022572 intron rdx - chr3R 14023498 intron rdx - chr3R_14_14020001 chr3R_14020001 D4-c1 1957 chr3R 14058121 14058155 chr3R 14058242 14058276 14 121 1.5 1.0 1.2 6.4 155 chr3R 14058121 intron foxo + chr3R 14058198 intron foxo + chr3R 14058276 intron foxo + chr3R_14_14055001 chr3R_14055001 D4-c1 1958 chr3R 14067151 14067156 chr3R 14067231 14067236 4 80 1.5 1.5 1.5 1.6 85 chr3R 14067151 exon foxo + chr3R 14067194 intron foxo + chr3R 14067236 intron foxo + chr3R_4_14065001 chr3R_14065001 D4-c1 1959 chr3R 14070127 14070146 chr3R 14070209 14070228 16 82 8.5 8.5 8.5 1.7 101 chr3R 14070127 intron foxo + chr3R 14070178 intron foxo + chr3R 14070228 intron foxo + chr3R_16_14070001 chr3R_14070001 D4-c1 1960 chr3R 14174955 14174992 chr3R 14175043 14175080 16 88 2.5 2.0 2.2 5.0 125 chr3R 14174955 3` UTR Dop1R1 - chr3R 14175018 3` UTR Dop1R1 - chr3R 14175080 3` UTR Dop1R1 - chr3R_16_14175001 chr3R_14175001 D4-c1 1961 chr3R 14180811 14180838 chr3R 14185577 14185604 F-element 11 4766 3.0 3.0 3.0 2.8 4793 chr3R 14180811 intron Dop1R1 - chr3R 14183208 intron Dop1R1 - chr3R 14185604 intron Dop1R1 - chr3R_11_14180001 chr3R_14180001 D4-c1 1962 chr3R 14246392 14246417 chr3R 14247889 14247914 jockey 14 1497 9.0 5.5 7.2 1.7 1522 chr3R 14246392 intergenic not near genes chr3R 14247153 intergenic not near genes chr3R 14247914 intergenic not near genes chr3R_14_14245001 chr3R_14245001 D4-c1 1963 chr3R 14319060 14319093 chr3R 14319143 14319176 18 83 5.5 4.0 4.8 3.1 116 chr3R 14319060 3` UTR pr-set7 + chr3R 14319118 3` UTR pr-set7 + chr3R 14319176 3` UTR pr-set7 + chr3R_18_14315001 chr3R_14315001 D4-c1 1964 chr3R 14372623 14372660 chr3R 14372714 14372751 16 91 2.0 6.0 4.0 3.2 128 chr3R 14372623 5` UTR NK7.1 - chr3R 14372687 5` UTR NK7.1 - chr3R 14372751 5` UTR NK7.1 - chr3R_16_14370001 chr3R_14370001 D4-c1 1965 chr3R 14440724 14440755 chr3R 14440801 14440832 9 77 2.0 3.5 2.8 2.4 108 chr3R 14440724 intron cv-c - chr3R 14440778 intron cv-c - chr3R 14440832 intron cv-c - chr3R_9_14440001 chr3R_14440001 D4-c1 1966 chr3R 14458894 14458914 chr3R 14458976 14458996 11 82 0.0 4.5 2.2 3.4 102 chr3R 14458894 intron cv-c - chr3R 14458945 intron cv-c - chr3R 14458996 intron cv-c - chr3R_11_14455001 chr3R_14455001 D4-c1 1967 chr3R 14462116 14462134 chr3R 14462262 14462271 16 145 0.0 3.5 1.8 5.7 155 chr3R 14462116 intron cv-c - chr3R 14462194 intron cv-c - chr3R 14462271 intron cv-c - chr3R_16_14460001 chr3R_14460001 D4-c1 1968 chr3R 14469795 14469829 chr3R 14469872 14469906 19 77 3.5 6.0 4.8 3.3 111 chr3R 14469795 intron cv-c - chr3R 14469850 intron cv-c - chr3R 14469906 intron cv-c - chr3R_19_14465001 chr3R_14465001 D4-c1 1969 chr3R 14486180 14486214 chr3R 14486259 14486294 15 80 4.5 2.0 3.2 3.6 114 chr3R 14486180 intergenic not near genes chr3R 14486237 intergenic not near genes chr3R 14486294 intergenic not near genes chr3R_15_14485001 chr3R_14485001 D4-c1 1970 chr3R 14497401 14497438 chr3R 14497483 14497520 16 82 4.5 4.0 4.2 3.1 119 chr3R 14497401 intron CR44177 + chr3R 14497460 intron CR44177 + chr3R 14497520 intron CR44177 + chr3R_16_14495001 chr3R_14495001 D4-c1 1971 chr3R 14526337 14526360 chr3R 14526518 14526541 6 181 1.5 4.5 3.0 1.5 204 chr3R 14526337 intron Pde6 - chr3R 14526439 intron Pde6 - chr3R 14526541 intron Pde6 - chr3R_6_14525001 chr3R_14525001 D4-c1 1972 chr3R 14533582 14533592 chr3R 14533671 14533681 4 89 0.0 8.0 4.0 0.8 99 chr3R 14533582 intron Pde6 - chr3R 14533632 intron Pde6 - chr3R 14533681 intron Pde6 - chr3R_4_14530001 chr3R_14530001 D4-c1 1973 chr3R 14548574 14548606 chr3R 14548660 14548695 17 88 5.5 4.5 5.0 2.8 121 chr3R 14548574 intron Pde6 - chr3R 14548634 intron Pde6 - chr3R 14548695 intron Pde6 - chr3R_17_14545001 chr3R_14545001 D4-c1 1974 chr3R 14551883 14551901 chr3R 14551962 14551980 7 79 2.5 7.0 4.8 1.2 97 chr3R 14551883 intron Pde6 - chr3R 14551932 intron Pde6 - chr3R 14551980 intron Pde6 - chr3R_7_14550001 chr3R_14550001 D4-c1 1975 chr3R 14624710 14624743 chr3R 14624874 14624907 15 164 5.5 3.0 4.2 2.9 197 chr3R 14624710 intron put - chr3R 14624808 intron put - chr3R 14624907 intron put - chr3R_15_14620001 chr3R_14620001 D4-c1 1976 chr3R 14682880 14682884 chr3R 14682971 14682975 5 91 6.5 9.0 7.8 0.6 95 chr3R 14682880 intron Meltrin - chr3R 14682928 intron Meltrin - chr3R 14682975 intron Meltrin - chr3R_5_14680001 chr3R_14680001 D4-c1 1977 chr3R 14704381 14704418 chr3R 14704459 14704496 16 78 3.5 4.0 3.8 3.3 115 chr3R 14704381 intron kibra - chr3R 14704438 intron kibra - chr3R 14704496 intron kibra - chr3R_16_14700001 chr3R_14700001 D4-c1 1978 chr3R 14726522 14726541 chr3R 14726628 14726647 4 106 0.5 2.5 1.5 1.6 125 chr3R 14726522 intron CG7530 - chr3R 14726584 intron CG7530 - chr3R 14726647 intron CG7530 - chr3R_4_14725001 chr3R_14725001 D4-c1 1979 chr3R 14760524 14760547 chr3R 14760616 14760639 4 92 1.5 0.0 0.8 2.2 115 chr3R 14760524 intron jvl + chr3R 14760582 intron jvl + chr3R 14760639 intron jvl + chr3R_4_14760001 chr3R_14760001 D4-c1 1980 chr3R 14880744 14880772 chr3R 14880961 14880989 10 216 34.5 27.0 30.8 0.3 245 chr3R 14880744 exon CG3631 + chr3R 14880866 intron CG3631 + chr3R 14880989 exon CG3631 + chr3R_10_14880001 chr3R_14880001 D4-c1 1981 chr3R 14881482 14881772 chr3R 14881596 14881882 19 112 29.5 26.0 27.8 0.7 400 chr3R 14881482 exon CG3631 + chr3R 14881682 exon CG3631 + chr3R 14881882 exon CG3631 + chr3R_19_14880001 chr3R_14880001 D4-c1 1982 chr3R 14898473 14898505 chr3R 14898594 14898626 11 121 2.5 3.0 2.8 2.9 153 chr3R 14898473 intergenic Nup93-2 -,CG3817 + chr3R 14898550 intergenic Nup93-2 -,CG3817 + chr3R 14898626 intergenic CG3817 +,Nup93-2 - chr3R_11_14895001 chr3R_14895001 D4-c1 1983 chr3R 14955153 14955180 chr3R 14955244 14955271 9 91 4.5 2.0 3.2 2.1 118 chr3R 14955153 intergenic not near genes chr3R 14955212 intergenic not near genes chr3R 14955271 intergenic not near genes chr3R_9_14955001 chr3R_14955001 D4-c1 1984 chr3R 14973587 14973617 chr3R 14974077 14974106 17 489 3.0 8.0 5.5 2.6 519 chr3R 14973587 intergenic not near genes chr3R 14973846 intergenic not near genes chr3R 14974106 intergenic not near genes chr3R_17_14970001 chr3R_14970001 D4-c1 1985 chr3R 15059276 15059475 chr3R 15059471 15059563 BS 7 118 0.0 0.0 0.0 7.0 287 chr3R 15059276 intron dpr9 - chr3R 15059420 intron dpr9 - chr3R 15059563 intron dpr9 - chr3R_7_15055001 chr3R_15055001 D4-c1 1986 chr3R 15078342 15078373 chr3R 15078423 15078454 13 81 1.0 7.0 4.0 2.6 112 chr3R 15078342 intergenic CG6974 - chr3R 15078398 intergenic CG6974 - chr3R 15078454 intergenic CG6974 - chr3R_13_15075001 chr3R_15075001 D4-c1 1987 chr3R 15079805 15079839 chr3R 15080047 15080081 pogo 11 242 8.0 1.0 4.5 2.0 276 chr3R 15079805 3` UTR CG6966 - chr3R 15079943 3` UTR CG6966 - chr3R 15080081 3` UTR CG6966 - chr3R_11_15075001 chr3R_15075001 D4-c1 1988 chr3R 15132058 15132093 chr3R 15135119 15135160 Juan 19 3063 9.0 10.0 9.5 1.8 3102 chr3R 15132058 intergenic CG42788 - chr3R 15133609 intergenic not near genes chr3R 15135160 3` UTR CG6912 - chr3R_19_15130001 chr3R_15130001 D4-c1 1989 chr3R 15130868 15130884 chr3R 15141228 15141244 9 10360 25.0 45.5 35.2 0.2 10376 chr3R 15130868 intron CG42788 - chr3R 15136056 exon CG6912 - chr3R 15141244 exon CG3987 + chr3R_9_15135001 chr3R_15135001 D4-c1 1990 chr3R 15162548 15162562 chr3R 15167317 15167331 F-element 7 4769 7.5 1.0 4.2 1.3 4783 chr3R 15162548 intron Gyc88E + chr3R 15164940 intron Gyc88E + chr3R 15167331 intron Gyc88E + chr3R_7_15160001 chr3R_15160001 D4-c1 1991 chr3R 15286987 15286988 chr3R 21907534 21907536 7 6620547 18.5 29.0 23.8 0.3 6620549 chr3R 15286987 intron Tm1 + chr3R 18597262 intron,exon qin +,CG14304 - chr3R 21907536 intergenic CG6678 + chr3R_7_18595001 chr3R_18595001 D4-c1 1992 chr3R 15462909 15462941 chr3R 15462997 15463028 6 88 2.0 3.5 2.8 1.6 119 chr3R 15462909 intron AdamTS-A - chr3R 15462968 intron AdamTS-A - chr3R 15463028 intron AdamTS-A - chr3R_6_15460001 chr3R_15460001 D4-c1 1993 chr3R 15592890 15592915 chr3R 15592975 15593000 8 85 7.0 4.5 5.8 1.2 110 chr3R 15592890 intergenic not near genes chr3R 15592945 intergenic not near genes chr3R 15593000 intergenic not near genes chr3R_8_15590001 chr3R_15590001 D4-c1 1994 chr3R 15594656 15594675 chr3R 15594740 15594759 10 84 0.0 5.5 2.8 2.6 103 chr3R 15594656 intergenic not near genes chr3R 15594708 intergenic not near genes chr3R 15594759 intergenic not near genes chr3R_10_15590001 chr3R_15590001 D4-c1 1995 chr3R 15601163 15601196 chr3R 15608686 15608719 412 19 7523 6.5 6.0 6.2 2.6 7556 chr3R 15601163 intergenic not near genes chr3R 15604941 intergenic not near genes chr3R 15608719 intergenic not near genes chr3R_19_15600001 chr3R_15600001 D4-c1 1996 chr3R 15618746 15618763 chr3R 15626221 15626238 blood 7 7475 1.5 4.5 3.0 1.8 7492 chr3R 15618746 intergenic not near genes chr3R 15622492 intergenic not near genes chr3R 15626238 intergenic not near genes chr3R_7_15620001 chr3R_15620001 D4-c1 1997 chr3R 15646793 15646797 chr3R 15646877 15646881 6 84 0.0 7.0 3.5 1.3 88 chr3R 15646793 intergenic not near genes chr3R 15646837 intergenic not near genes chr3R 15646881 intergenic not near genes chr3R_6_15645001 chr3R_15645001 D4-c1 1998 chr3R 15734170 15734205 chr3R 15734262 15734297 8 92 7.5 2.0 4.8 1.4 127 chr3R 15734170 intergenic not near genes chr3R 15734234 intergenic not near genes chr3R 15734297 intergenic not near genes chr3R_8_15730001 chr3R_15730001 D4-c1 1999 chr3R 16033410 16033429 chr3R 16033492 16033511 6 82 3.5 2.5 3.0 1.5 101 chr3R 16033410 intron pnr + chr3R 16033460 intron pnr + chr3R 16033511 intron pnr + chr3R_6_16030001 chr3R_16030001 D4-c1 2000 chr3R 16472579 16472599 chr3R 16472656 16472676 12 75 11.5 14.0 12.8 0.9 97 chr3R 16472579 intergenic Gyc-89Da + chr3R 16472628 5` UTR Gyc-89Da + chr3R 16472676 5` UTR Gyc-89Da + chr3R_12_16470001 chr3R_16470001 D4-c1 2001 chr3R 16563680 16563709 chr3R 16563760 16563789 16 80 10.5 7.5 9.0 1.6 109 chr3R 16563680 intron CG42342 + chr3R 16563734 intron CG42342 + chr3R 16563789 intron CG42342 + chr3R_16_16560001 chr3R_16560001 D4-c1 2002 chr3R 16582908 16582916 chr3R 16582987 16582996 4 80 7.5 12.5 10.0 0.4 88 chr3R 16582908 intron Scp2 - chr3R 16582952 intron Scp2 - chr3R 16582996 intron Scp2 - chr3R_4_16580001 chr3R_16580001 D4-c1 2003 chr3R 16731934 16731942 chr3R 16732015 16732023 4 81 2.0 3.0 2.5 1.1 89 chr3R 16731934 intron Ubx - chr3R 16731978 intron Ubx - chr3R 16732023 intron Ubx - chr3R_4_16730001 chr3R_16730001 D4-c1 2004 chr3R 16756316 16756354 chr3R 16762508 16762546 diver 12 6192 7.0 5.0 6.0 1.7 6230 chr3R 16756316 intron bxd - chr3R 16759431 intron bxd - chr3R 16762546 intron bxd - chr3R_12_16755001 chr3R_16755001 D4-c1 2005 chr3R 16931433 16931433 chr3R 22941686 22941688 4 6010254 32.0 10.5 21.2 0.2 6010255 chr3R 16931433 exon Abd-B - chr3R 19936560 intron Hs6st - chr3R 22941688 intron klg + chr3R_4_19935001 chr3R_19935001 D4-c1 2006 chr3R 17120497 17120534 chr3R 17120723 17120760 13 226 3.5 3.5 3.5 2.9 263 chr3R 17120497 intron,exon cher -,CG34278 + chr3R 17120628 intron,exon cher -,CG34278 + chr3R 17120760 intron,3` UTR cher -,CG34278 + chr3R_13_17120001 chr3R_17120001 D4-c1 2007 chr3R 17227313 17227315 chr3R 26242169 26242197 4 9014876 28.5 6.5 17.5 0.2 9014884 chr3R 17227313 intergenic not near genes chr3R 21734755 intergenic not near genes chr3R 26242197 intron CR42745 + chr3R_4_21730001 chr3R_21730001 D4-c1 2008 chr3R 17294666 17294698 chr3R 17295095 17295127 BS 12 429 5.5 3.0 4.2 2.3 461 chr3R 17294666 intergenic not near genes chr3R 17294896 intergenic not near genes chr3R 17295127 intergenic not near genes chr3R_12_17290001 chr3R_17290001 D4-c1 2009 chr3R 17335156 17335185 chr3R 17335233 17335262 11 76 3.5 4.5 4.0 2.2 106 chr3R 17335156 intron beat-IIa - chr3R 17335209 intron beat-IIa - chr3R 17335262 intron beat-IIa - chr3R_11_17335001 chr3R_17335001 D4-c1 2010 chr3R 17346245 17346247 chr3R 21907534 21907536 9 4561289 26.0 29.0 27.5 0.3 4561291 chr3R 17346245 intron beat-IIa - chr3R 19626890 intron CG6231 - chr3R 21907536 intergenic CG6678 + chr3R_9_19625001 chr3R_19625001 D4-c1 2011 chr3R 17355491 17355524 chr3R 17355570 17355603 18 79 3.0 3.0 3.0 4.5 112 chr3R 17355491 intron beat-IIa - chr3R 17355547 intron beat-IIa - chr3R 17355603 intron beat-IIa - chr3R_18_17355001 chr3R_17355001 D4-c1 2012 chr3R 17371420 17371426 chr3R 17371476 17371504 4 71 5.0 6.5 5.8 0.6 84 chr3R 17371420 3` UTR CR44256 - chr3R 17371462 3` UTR CR44256 - chr3R 17371504 3` UTR CR44256 - chr3R_4_17370001 chr3R_17370001 D4-c1 2013 chr3R 17415965 17415998 chr3R 17416046 17416079 26 80 8.5 9.5 9.0 2.6 114 chr3R 17415965 exon CG5866 + chr3R 17416022 exon CG5866 + chr3R 17416079 exon CG5866 + chr3R_26_17415001 chr3R_17415001 D4-c1 2014 chr3R 17452544 17452578 chr3R 17452745 17452779 18 201 2.5 4.0 3.2 4.3 235 chr3R 17452544 intergenic not near genes chr3R 17452662 intergenic not near genes chr3R 17452779 intergenic not near genes chr3R_18_17450001 chr3R_17450001 D4-c1 2015 chr3R 17461200 17461231 chr3R 17461283 17461314 14 83 2.5 5.0 3.8 2.9 114 chr3R 17461200 intergenic not near genes chr3R 17461257 intergenic not near genes chr3R 17461314 intergenic not near genes chr3R_14_17460001 chr3R_17460001 D4-c1 2016 chr3R 17467613 17467622 chr3R 17467725 17467734 7 112 3.0 6.5 4.8 1.2 121 chr3R 17467613 intergenic not near genes chr3R 17467674 intergenic not near genes chr3R 17467734 intergenic not near genes chr3R_7_17465001 chr3R_17465001 D4-c1 2017 chr3R 17586715 17586724 chr3R 17586821 17586830 8 106 7.0 1.0 4.0 1.6 115 chr3R 17586715 intergenic not near genes chr3R 17586772 intergenic not near genes chr3R 17586830 intergenic not near genes chr3R_8_17585001 chr3R_17585001 D4-c1 2018 chr3R 17591288 17591322 chr3R 17591724 17591759 F-element 9 437 6.5 7.0 6.8 1.2 471 chr3R 17591288 intergenic not near genes chr3R 17591524 intergenic not near genes chr3R 17591759 intergenic not near genes chr3R_9_17590001 chr3R_17590001 D4-c1 2019 chr3R 17638319 17638321 chr3R 17638806 17638808 roo 4 487 0.0 1.0 0.5 2.7 489 chr3R 17638319 intron CG43175 + chr3R 17638564 intron CG43175 + chr3R 17638808 intron,5` UTR CG43175 +,CR45222 + chr3R_4_17635001 chr3R_17635001 D4-c1 2020 chr3R 17653101 17653114 chr3R 17653179 17653205 6 88 4.5 3.0 3.8 1.2 104 chr3R 17653101 intron,intron CG14322 +,CR45223 - chr3R 17653153 intron,intron CG14322 +,CR45223 - chr3R 17653205 intron,intron CG14322 +,CR45223 - chr3R_6_17650001 chr3R_17650001 D4-c1 2021 chr3R 17725073 17725087 chr3R 17725168 17725182 7 95 3.0 0.0 1.5 2.8 109 chr3R 17725073 intergenic Atg8b - chr3R 17725128 intergenic Atg8b - chr3R 17725182 intergenic Atg8b - chr3R_7_17725001 chr3R_17725001 D4-c1 2022 chr3R 17739181 17739218 chr3R 17739264 17739293 29 82 7.0 5.5 6.2 4.0 112 chr3R 17739181 intron TyrRII + chr3R 17739237 intron TyrRII + chr3R 17739293 intron TyrRII + chr3R_29_17735001 chr3R_17735001 D4-c1 2023 chr3R 17823207 17823235 chr3R 17823293 17823321 15 86 6.0 4.0 5.0 2.5 114 chr3R 17823207 intron tinc + chr3R 17823264 intron tinc + chr3R 17823321 intron tinc + chr3R_15_17820001 chr3R_17820001 D4-c1 2024 chr3R 17845207 17845217 chr3R 17845285 17845295 9 78 5.5 13.0 9.2 0.9 88 chr3R 17845207 intron tinc + chr3R 17845251 intron tinc + chr3R 17845295 intron tinc + chr3R_9_17845001 chr3R_17845001 D4-c1 2025 chr3R 17925850 17925889 chr3R 17927318 17927357 hobo 13 1468 6.0 7.0 6.5 1.7 1507 chr3R 17925850 intron cpo + chr3R 17926604 intron cpo + chr3R 17927357 intron cpo + chr3R_13_17925001 chr3R_17925001 D4-c1 2026 chr3R 17983210 17983246 chr3R 17983287 17983323 10 76 4.0 1.5 2.8 2.6 113 chr3R 17983210 intron cpo + chr3R 17983266 intron cpo + chr3R 17983323 intron cpo + chr3R_10_17980001 chr3R_17980001 D4-c1 2027 chr3R 18032783 18032800 chr3R 18040457 18040474 opus 10 7674 1.0 5.0 3.0 2.5 7691 chr3R 18032783 intergenic not near genes chr3R 18036628 intergenic not near genes chr3R 18040474 intergenic not near genes chr3R_10_18035001 chr3R_18035001 D4-c1 2028 chr3R 18041756 18041778 chr3R 18041834 18041856 11 78 0.0 0.5 0.2 9.2 100 chr3R 18041756 intergenic not near genes chr3R 18041806 intergenic not near genes chr3R 18041856 intergenic not near genes chr3R_11_18040001 chr3R_18040001 D4-c1 2029 chr3R 18061443 18061459 chr3R 18061536 18061552 5 93 4.0 0.0 2.0 1.7 109 chr3R 18061443 intergenic not near genes chr3R 18061498 intergenic not near genes chr3R 18061552 intergenic not near genes chr3R_5_18060001 chr3R_18060001 D4-c1 2030 chr3R 18068004 18068018 chr3R 18068087 18068101 7 83 0.0 5.0 2.5 2.0 97 chr3R 18068004 intergenic not near genes chr3R 18068052 intergenic not near genes chr3R 18068101 intergenic not near genes chr3R_7_18065001 chr3R_18065001 D4-c1 2031 chr3R 18107127 18107140 chr3R 18107211 18107224 4 84 0.0 5.0 2.5 1.1 97 chr3R 18107127 intron sr + chr3R 18107176 intron sr + chr3R 18107224 intron sr + chr3R_4_18105001 chr3R_18105001 D4-c1 2032 chr3R 18122896 18122908 chr3R 18122974 18122986 6 78 4.0 3.0 3.5 1.3 90 chr3R 18122896 intron sr + chr3R 18122941 intron sr + chr3R 18122986 intron sr + chr3R_6_18120001 chr3R_18120001 D4-c1 2033 chr3R 18143495 18143502 chr3R 18143583 18143590 6 88 4.5 0.0 2.2 1.9 95 chr3R 18143495 intergenic not near genes chr3R 18143542 intergenic not near genes chr3R 18143590 intergenic not near genes chr3R_6_18140001 chr3R_18140001 D4-c1 2034 chr3R 18215653 18215659 chr3R 18295876 18295885 6 80225 0.0 16.0 8.0 0.7 80232 chr3R 18215653 intergenic CG14314 + chr3R 18255769 5` UTR,exon Tgs1 +,moi + chr3R 18295885 intron l(3)05822 - chr3R_6_18255001 chr3R_18255001 D4-c1 2035 chr3R 18215759 18215768 chr3R 18215929 18215938 5 170 0.5 4.5 2.5 1.4 179 chr3R 18215759 intergenic CG14314 + chr3R 18215848 intergenic CG14314 + chr3R 18215938 intergenic CG14314 + chr3R_5_18215001 chr3R_18215001 D4-c1 2036 chr3R 18299264 18299295 chr3R 18302631 18302663 10 3367 34.5 38.5 36.5 0.3 3399 chr3R 18299264 5` UTR Dlc90F + chr3R 18300964 exon CG18600 - chr3R 18302663 exon CG7126 - chr3R_10_18300001 chr3R_18300001 D4-c1 2037 chr3R 18481196 18481209 chr3R 18481281 18481294 7 85 0.0 6.5 3.2 1.7 98 chr3R 18481196 intron fru - chr3R 18481245 intron fru - chr3R 18481294 intron fru - chr3R_7_18480001 chr3R_18480001 D4-c1 2038 chr3R 18501591 18501628 chr3R 18501673 18501710 21 82 3.0 3.5 3.2 5.0 119 chr3R 18501591 intron fru - chr3R 18501650 intron fru - chr3R 18501710 intron fru - chr3R_21_18500001 chr3R_18500001 D4-c1 2039 chr3R 18528364 18528400 chr3R 18528452 18528488 16 87 3.5 2.0 2.8 4.2 124 chr3R 18528364 intron fru - chr3R 18528426 intron fru - chr3R 18528488 intron fru - chr3R_16_18525001 chr3R_18525001 D4-c1 2040 chr3R 18559509 18559517 chr3R 18559651 18559666 5 148 0.0 4.0 2.0 1.7 157 chr3R 18559509 intergenic CG7691 + chr3R 18559588 intergenic CG7691 + chr3R 18559666 intergenic CG7691 + chr3R_5_18555001 chr3R_18555001 D4-c1 2041 chr3R 18606508 18606534 chr3R 18610740 18610767 F-element 9 4233 3.5 3.0 3.2 2.1 4259 chr3R 18606508 intron,intron qin +,CG14304 - chr3R 18608638 intron,intron qin +,CG14304 - chr3R 18610767 intron,intron qin +,CG14304 - chr3R_9_18605001 chr3R_18605001 D4-c1 2042 chr3R 18618266 18618295 chr3R 18618352 18618381 6 86 2.5 3.0 2.8 1.6 115 chr3R 18618266 intron,intron qin +,CG14304 - chr3R 18618324 intron,intron qin +,CG14304 - chr3R 18618381 intron,intron qin +,CG14304 - chr3R_6_18615001 chr3R_18615001 D4-c1 2043 chr3R 18695763 18695773 chr3R 18695848 18695858 5 85 7.5 0.0 3.8 1.0 95 chr3R 18695763 3` UTR CG34282 + chr3R 18695810 intergenic CG34282 + chr3R 18695858 intergenic CG34282 + chr3R_5_18695001 chr3R_18695001 D4-c1 2044 chr3R 18721056 18721067 chr3R 18721194 18721205 7 138 2.0 1.5 1.8 2.5 149 chr3R 18721056 intron Cha + chr3R 18721130 intron Cha + chr3R 18721205 intron Cha + chr3R_7_18720001 chr3R_18720001 D4-c1 2045 chr3R 18781690 18781727 chr3R 18781767 18781804 12 77 4.0 4.0 4.0 2.4 114 chr3R 18781690 intron CG7720 - chr3R 18781747 intron CG7720 - chr3R 18781804 intron CG7720 - chr3R_12_18780001 chr3R_18780001 D4-c1 2046 chr3R 18839810 18839838 chr3R 18839895 18839923 10 84 2.0 7.0 4.5 1.8 113 chr3R 18839810 intron CG18208 - chr3R 18839866 intron CG18208 - chr3R 18839923 intron CG18208 - chr3R_10_18835001 chr3R_18835001 D4-c1 2047 chr3R 18948038 18948072 chr3R 18952175 18952209 12 4137 21.5 20.5 21.0 0.5 4171 chr3R 18948038 intron CG42613 + chr3R 18950124 intron CG42613 + chr3R 18952209 intron,intron CG42613 +,CG43732 + chr3R_12_18950001 chr3R_18950001 D4-c1 2048 chr3R 19085658 19085677 chr3R 19085997 19086016 5 339 4.5 5.0 4.8 0.9 358 chr3R 19085658 intron cdi - chr3R 19085837 intron cdi - chr3R 19086016 intron cdi - chr3R_5_19085001 chr3R_19085001 D4-c1 2049 chr3R 19106821 19106834 chr3R 19106912 19106914 8 89 8.5 0.0 4.2 1.5 93 chr3R 19106821 intron CG6040 + chr3R 19106868 intron CG6040 + chr3R 19106914 intron CG6040 + chr3R_8_19105001 chr3R_19105001 D4-c1 2050 chr3R 19276933 19276949 chr3R 19277014 19277030 4 81 2.5 4.0 3.2 1.0 97 chr3R 19276933 intergenic not near genes chr3R 19276982 intergenic not near genes chr3R 19277030 intergenic not near genes chr3R_4_19275001 chr3R_19275001 D4-c1 2051 chr3R 19280552 19280587 chr3R 19280629 19280664 23 77 3.0 1.5 2.2 7.2 112 chr3R 19280552 intergenic not near genes chr3R 19280608 intergenic not near genes chr3R 19280664 intergenic not near genes chr3R_23_19280001 chr3R_19280001 D4-c1 2052 chr3R 19344672 19344680 chr3R 19344808 19344816 4 136 6.5 3.5 5.0 0.7 144 chr3R 19344672 intergenic not near genes chr3R 19344744 intergenic not near genes chr3R 19344816 intergenic not near genes chr3R_4_19340001 chr3R_19340001 D4-c1 2053 chr3R 19418409 19418440 chr3R 19418502 19418533 11 93 3.0 4.0 3.5 2.4 124 chr3R 19418409 intron CG31221 + chr3R 19418471 intron CG31221 + chr3R 19418533 intron CG31221 + chr3R_11_19415001 chr3R_19415001 D4-c1 2054 chr3R 19490437 19490468 chr3R 19490527 19490558 10 90 4.0 3.0 3.5 2.2 121 chr3R 19490437 intron,exon Dys +,CG15025 - chr3R 19490498 intron,intron Dys +,CG15025 - chr3R 19490558 intron,intron Dys +,CG15025 - chr3R_10_19490001 chr3R_19490001 D4-c1 2055 chr3R 19599058 19599089 chr3R 19599289 19599320 11 230 8.5 6.0 7.2 1.3 262 chr3R 19599058 intergenic Cpr92A - chr3R 19599189 intergenic Cpr92A - chr3R 19599320 intergenic Cpr92A - chr3R_11_19595001 chr3R_19595001 D4-c1 2056 chr3R 19602754 19602788 chr3R 19602833 19602867 7 79 4.5 1.0 2.8 1.8 113 chr3R 19602754 intergenic CG7333 + chr3R 19602810 intergenic CG7333 + chr3R 19602867 intergenic CG7333 + chr3R_7_19600001 chr3R_19600001 D4-c1 2057 chr3R 19638491 19638521 chr3R 19638578 19638608 10 87 2.5 2.5 2.5 2.9 117 chr3R 19638491 intron subdued - chr3R 19638550 intron subdued - chr3R 19638608 intron subdued - chr3R_10_19635001 chr3R_19635001 D4-c1 2058 chr3R 19678485 19678520 chr3R 19678578 19678613 14 93 3.0 3.0 3.0 3.5 128 chr3R 19678485 intron Naam + chr3R 19678549 intron Naam + chr3R 19678613 intron Naam + chr3R_14_19675001 chr3R_19675001 D4-c1 2059 chr3R 19827525 19827558 chr3R 19827612 19827645 5 87 4.0 2.5 3.2 1.2 120 chr3R 19827525 intron bnl - chr3R 19827585 intron bnl - chr3R 19827645 intron bnl - chr3R_5_19825001 chr3R_19825001 D4-c1 2060 chr3R 19908274 19908301 chr3R 19908359 19908386 12 85 0.0 3.5 1.8 4.3 112 chr3R 19908274 intron RhoGAP92B + chr3R 19908330 intron RhoGAP92B + chr3R 19908386 intron RhoGAP92B + chr3R_12_19905001 chr3R_19905001 D4-c1 2061 chr3R 19943879 19943899 chr3R 19943960 19943980 5 81 5.0 0.5 2.8 1.3 101 chr3R 19943879 intron Hs6st - chr3R 19943930 intron Hs6st - chr3R 19943980 intron Hs6st - chr3R_5_19940001 chr3R_19940001 D4-c1 2062 chr3R 19953948 19953982 chr3R 19954026 19954060 13 77 6.0 5.0 5.5 2.0 112 chr3R 19953948 intron Hs6st - chr3R 19954004 intron Hs6st - chr3R 19954060 intron Hs6st - chr3R_13_19950001 chr3R_19950001 D4-c1 2063 chr3R 19965016 19965045 chr3R 19965106 19965135 8 90 6.5 3.5 5.0 1.3 119 chr3R 19965016 intron Hs6st - chr3R 19965076 intron Hs6st - chr3R 19965135 intron Hs6st - chr3R_8_19965001 chr3R_19965001 D4-c1 2064 chr3R 20008819 20008854 chr3R 20008901 20008936 19 82 2.0 3.5 2.8 5.0 117 chr3R 20008819 intergenic MED25 +,Hs6st - chr3R 20008878 intergenic MED25 +,Hs6st - chr3R 20008936 intergenic MED25 +,Hs6st - chr3R_19_20005001 chr3R_20005001 D4-c1 2065 chr3R 20156690 20156721 chr3R 20165861 20165892 roo 8 9170 3.5 6.0 4.8 1.4 9202 chr3R 20156690 intergenic not near genes chr3R 20161291 intergenic not near genes chr3R 20165892 intergenic not near genes chr3R_8_20160001 chr3R_20160001 D4-c1 2066 chr3R 20330997 20331029 chr3R 20331484 20331516 roo 10 487 2.0 4.0 3.0 2.5 519 chr3R 20330997 intergenic Sirt2 + chr3R 20331256 intergenic Sirt2 + chr3R 20331516 intergenic not near genes chr3R_10_20330001 chr3R_20330001 D4-c1 2067 chr3R 20661349 20661376 chr3R 20661608 20661635 11 258 4.5 2.5 3.5 2.4 286 chr3R 20661349 intergenic not near genes chr3R 20661492 intergenic not near genes chr3R 20661635 intergenic not near genes chr3R_11_20660001 chr3R_20660001 D4-c1 2068 chr3R 20707744 20707773 chr3R 20707960 20707989 14 216 4.0 4.0 4.0 2.8 245 chr3R 20707744 intron Oamb - chr3R 20707866 intron Oamb - chr3R 20707989 intron Oamb - chr3R_14_20705001 chr3R_20705001 D4-c1 2069 chr3R 20722850 20722885 chr3R 20722978 20723013 18 128 4.5 3.5 4.0 3.6 163 chr3R 20722850 intergenic not near genes chr3R 20722932 intergenic not near genes chr3R 20723013 intergenic not near genes chr3R_18_20720001 chr3R_20720001 D4-c1 2070 chr3R 20730928 20731061 chr3R 20731029 20731150 13 97 0.0 0.0 0.0 13.0 222 chr3R 20730928 intergenic not near genes chr3R 20731039 intergenic not near genes chr3R 20731150 intergenic CG31205 + chr3R_13_20730001 chr3R_20730001 D4-c1 2071 chr3R 20771704 20771726 chr3R 20771786 20771802 6 81 0.0 4.5 2.2 1.9 98 chr3R 20771704 intron,intron Syp +,Takl1 - chr3R 20771753 intron,intron Syp +,Takl1 - chr3R 20771802 intron,exon Syp +,Takl1 - chr3R_6_20770001 chr3R_20770001 D4-c1 2072 chr3R 20787436 20787457 chr3R 20787528 20787549 10 92 6.0 4.0 5.0 1.7 113 chr3R 20787436 intron Syp + chr3R 20787492 intron Syp + chr3R 20787549 intron Syp + chr3R_10_20785001 chr3R_20785001 D4-c1 2073 chr3R 20841563 20841599 chr3R 20841727 20841763 18 164 3.0 4.5 3.8 3.8 200 chr3R 20841563 intergenic not near genes chr3R 20841663 intergenic CG15695 + chr3R 20841763 intergenic CG15695 + chr3R_18_20840001 chr3R_20840001 D4-c1 2074 chr3R 20848349 20848358 chr3R 20848440 20848449 4 91 1.0 2.0 1.5 1.6 100 chr3R 20848349 intergenic not near genes chr3R 20848399 intergenic not near genes chr3R 20848449 intergenic not near genes chr3R_4_20845001 chr3R_20845001 D4-c1 2075 chr3R 20850085 20850112 chr3R 20850171 20850198 8 86 2.5 2.0 2.2 2.5 113 chr3R 20850085 intergenic RpS30 + chr3R 20850142 intergenic RpS30 + chr3R 20850198 intergenic RpS30 + chr3R_8_20850001 chr3R_20850001 D4-c1 2076 chr3R 20854472 20854518 chr3R 20859268 20859309 Doc 11 4792 1.0 4.0 2.5 3.1 4837 chr3R 20854472 intron Ir93a - chr3R 20856890 intron Ir93a - chr3R 20859309 exon Ir93a - chr3R_11_20855001 chr3R_20855001 D4-c1 2077 chr3R 20870255 20870283 chr3R 20870334 20870369 14 85 4.5 2.5 3.5 3.1 114 chr3R 20870255 intergenic not near genes chr3R 20870312 intergenic not near genes chr3R 20870369 intergenic not near genes chr3R_14_20870001 chr3R_20870001 D4-c1 2078 chr3R 20901342 20901377 chr3R 20901429 20901464 21 86 4.0 3.5 3.8 4.4 122 chr3R 20901342 intergenic not near genes chr3R 20901403 intergenic not near genes chr3R 20901464 intergenic CG5621 + chr3R_21_20900001 chr3R_20900001 D4-c1 2079 chr3R 21014015 21014043 chr3R 21014094 21014122 11 79 6.0 4.5 5.2 1.8 107 chr3R 21014015 3` UTR Calx + chr3R 21014068 3` UTR Calx + chr3R 21014122 3` UTR Calx + chr3R_11_21010001 chr3R_21010001 D4-c1 2080 chr3R 21021633 21021667 chr3R 21021715 21021751 20 82 5.5 8.5 7.0 2.5 118 chr3R 21021633 intron CG17278 - chr3R 21021692 intron CG17278 - chr3R 21021751 intron CG17278 - chr3R_20_21020001 chr3R_21020001 D4-c1 2081 chr3R 21049181 21049187 chr3R 21049316 21049322 4 135 3.5 4.5 4.0 0.8 141 chr3R 21049181 intergenic CG7079 - chr3R 21049252 intergenic CG7079 - chr3R 21049322 intergenic CG7079 - chr3R_4_21045001 chr3R_21045001 D4-c1 2082 chr3R 21108037 21108063 chr3R 21108299 21108325 18 262 6.5 3.0 4.8 3.1 288 chr3R 21108037 intergenic Sec15 -,rtet + chr3R 21108181 intergenic Sec15 -,rtet + chr3R 21108325 intergenic rtet +,Sec15 - chr3R_18_21105001 chr3R_21105001 D4-c1 2083 chr3R 21129821 21130015 chr3R 21129911 21130093 8 87 1.0 0.0 0.5 5.3 272 chr3R 21129821 intergenic Obp93a -,CG5793 +,Ice2 + chr3R 21129957 intergenic Obp93a -,Ice2 +,CG5793 + chr3R 21130093 intergenic Ice2 +,Obp93a -,CG5793 + chr3R_8_21125001 chr3R_21125001 D4-c1 2084 chr3R 21141682 21141704 chr3R 21150160 21150186 Tirant 11 8481 3.5 10.0 6.8 1.4 8504 chr3R 21141682 intron SNF4Agamma + chr3R 21145934 intron SNF4Agamma + chr3R 21150186 intron SNF4Agamma + chr3R_11_21145001 chr3R_21145001 D4-c1 2085 chr3R 21154547 21154585 chr3R 21154753 21154801 11 212 5.5 0.0 2.8 2.9 254 chr3R 21154547 intron SNF4Agamma + chr3R 21154674 intron SNF4Agamma + chr3R 21154801 intron SNF4Agamma + chr3R_11_21150001 chr3R_21150001 D4-c1 2086 chr3R 21163245 21163275 chr3R 21163324 21163354 11 79 9.0 4.0 6.5 1.5 109 chr3R 21163245 intron SNF4Agamma + chr3R 21163300 intron SNF4Agamma + chr3R 21163354 intron SNF4Agamma + chr3R_11_21160001 chr3R_21160001 D4-c1 2087 chr3R 21189714 21189724 chr3R 21189793 21189803 6 79 4.0 2.5 3.2 1.4 89 chr3R 21189714 intron SNF4Agamma + chr3R 21189758 intron SNF4Agamma + chr3R 21189803 intron SNF4Agamma + chr3R_6_21185001 chr3R_21185001 D4-c1 2088 chr3R 21200408 21200438 chr3R 21200486 21200516 15 78 5.0 4.5 4.8 2.6 108 chr3R 21200408 intron SNF4Agamma + chr3R 21200462 intron SNF4Agamma + chr3R 21200516 intron SNF4Agamma + chr3R_15_21200001 chr3R_21200001 D4-c1 2089 chr3R 21214743 21214765 chr3R 21214916 21214938 8 173 2.0 2.0 2.0 2.7 195 chr3R 21214743 intergenic CG5862 + chr3R 21214840 intergenic CG5862 + chr3R 21214938 intergenic CG5862 + chr3R_8_21210001 chr3R_21210001 D4-c1 2090 chr3R 21322972 21322993 chr3R 21323052 21323073 8 80 6.0 0.0 3.0 2.0 101 chr3R 21322972 intron CG16791 - chr3R 21323022 intron CG16791 - chr3R 21323073 intron CG16791 - chr3R_8_21320001 chr3R_21320001 D4-c1 2091 chr3R 21472012 21472031 chr3R 21472094 21472113 7 82 6.5 7.0 6.8 0.9 101 chr3R 21472012 intergenic not near genes chr3R 21472062 intergenic not near genes chr3R 21472113 intergenic not near genes chr3R_7_21470001 chr3R_21470001 D4-c1 2092 chr3R 21506870 21506913 chr3R 21506957 21506994 10 83 0.5 5.0 2.8 2.6 124 chr3R 21506870 intron C15 + chr3R 21506932 intron C15 + chr3R 21506994 intron C15 + chr3R_10_21505001 chr3R_21505001 D4-c1 2093 chr3R 21518017 21518265 chr3R 21518147 21518350 4 96 0.0 0.0 0.0 4.0 333 chr3R 21518017 intergenic not near genes chr3R 21518184 intergenic not near genes chr3R 21518350 intergenic not near genes chr3R_4_21515001 chr3R_21515001 D4-c1 2094 chr3R 21519988 21520136 chr3R 21520090 21520231 16 99 1.5 1.5 1.5 6.4 243 chr3R 21519988 intergenic not near genes chr3R 21520110 intergenic not near genes chr3R 21520231 intergenic not near genes chr3R_16_21520001 chr3R_21520001 D4-c1 2095 chr3R 21532861 21532864 chr3R 21532947 21532950 4 86 0.0 4.0 2.0 1.3 89 chr3R 21532861 intron CR43372 - chr3R 21532906 3` UTR CR43372 - chr3R 21532950 3` UTR CR43372 - chr3R_4_21530001 chr3R_21530001 D4-c1 2096 chr3R 21624101 21624118 chr3R 21624196 21624213 6 95 4.5 5.5 5.0 1.0 112 chr3R 21624101 intron E2f - chr3R 21624157 intron E2f - chr3R 21624213 intron E2f - chr3R_6_21620001 chr3R_21620001 D4-c1 2097 chr3R 21709553 21709579 chr3R 21709963 21709989 11 410 5.5 2.0 3.8 2.3 436 chr3R 21709553 intron CG31176 - chr3R 21709771 intron CG31176 - chr3R 21709989 intron CG31176 - chr3R_11_21705001 chr3R_21705001 D4-c1 2098 chr3R 21725671 21725691 chr3R 21725808 21725828 7 137 0.0 6.0 3.0 1.8 157 chr3R 21725671 intergenic not near genes chr3R 21725750 intergenic not near genes chr3R 21725828 intergenic not near genes chr3R_7_21725001 chr3R_21725001 D4-c1 2099 chr3R 21757196 21757230 chr3R 21758414 21758448 10 1218 43.5 21.5 32.5 0.3 1252 chr3R 21757196 exon CG31198 + chr3R 21757822 intergenic CG31198 + chr3R 21758448 intergenic CG42335 + chr3R_10_21755001 chr3R_21755001 D4-c1 2100 chr3R 21761117 21761155 chr3R 21768510 21768543 mdg1 23 7391 6.5 5.0 5.8 3.4 7426 chr3R 21761117 exon CG42335 + chr3R 21764830 intron CG42335 + chr3R 21768543 exon CG42335 + chr3R_23_21760001 chr3R_21760001 D4-c1 2101 chr3R 21784857 21784885 chr3R 21784956 21784984 16 99 3.0 0.0 1.5 6.4 127 chr3R 21784857 3` UTR,3` UTR CASK -,CRG - chr3R 21784920 3` UTR,3` UTR CASK -,CRG - chr3R 21784984 3` UTR,3` UTR CASK -,CRG - chr3R_16_21780001 chr3R_21780001 D4-c1 2102 chr3R 21845888 21845902 chr3R 21846060 21846074 10 172 7.5 2.5 5.0 1.7 186 chr3R 21845888 5` UTR,exon CR44087 +,Gr93d - chr3R 21845981 intron,exon CR44087 +,Gr93d - chr3R 21846074 intron,exon CR44087 +,Gr93d - chr3R_10_21845001 chr3R_21845001 D4-c1 2103 chr3R 8339246 8339247 chr3R 21907534 21907534 14 13568287 22.5 29.0 25.8 0.5 13568288 chr3R 8339246 intergenic not near genes chr3R 15123390 intron CG42788 - chr3R 21907534 intergenic CG6678 + chr3R_14_15120001 chr3R_15120001 D4-c1 2104 chr3R 21907534 21907534 chr3R 28831801 28831802 25 6924267 34.0 30.5 32.2 0.8 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_25_25365001 chr3R_25365001 D4-c1 2105 chr3R 8339246 8339247 chr3R 21907535 21907535 6 13568288 22.5 29.5 26.0 0.2 13568289 chr3R 8339246 intergenic not near genes chr3R 15123390 intron CG42788 - chr3R 21907535 intergenic CG6678 + chr3R_6_15120001 chr3R_15120001 D4-c1 2106 chr3R 21907535 21907535 chr3R 28831801 28831802 39 6924267 33.5 30.5 32.0 1.2 6924267 chr3R 21907535 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_39_25365001 chr3R_25365001 D4-c1 2107 chr3R 21907536 21907536 chr3R 28831801 28831802 21 6924266 34.0 30.5 32.2 0.6 6924266 chr3R 21907536 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831802 intron WASp - chr3R_21_25365001 chr3R_25365001 D4-c1 2108 chr3R 21919000 21919017 chr3R 21919081 21919098 7 81 0.0 5.5 2.8 1.8 98 chr3R 21919000 intergenic not near genes chr3R 21919049 intergenic not near genes chr3R 21919098 intergenic not near genes chr3R_7_21915001 chr3R_21915001 D4-c1 2109 chr3R 21985228 21985262 chr3R 21985334 21985368 8 106 1.5 1.0 1.2 3.6 140 chr3R 21985228 intron Eip93F + chr3R 21985298 intron Eip93F + chr3R 21985368 intron Eip93F + chr3R_8_21985001 chr3R_21985001 D4-c1 2110 chr3R 22055559 22055588 chr3R 22055749 22055778 15 190 1.5 3.0 2.2 4.7 219 chr3R 22055559 intron how + chr3R 22055668 intron how + chr3R 22055778 intron how + chr3R_15_22055001 chr3R_22055001 D4-c1 2111 chr3R 22069826 22069857 chr3R 22069922 22069952 17 96 3.5 6.0 4.8 2.9 126 chr3R 22069826 intron how + chr3R 22069889 intron how + chr3R 22069952 intron how + chr3R_17_22065001 chr3R_22065001 D4-c1 2112 chr3R 22081601 22081601 chr3R 26855367 26855367 5 4773766 3.0 8.5 5.8 0.7 4773766 chr3R 22081601 intron CG13408 + chr3R 24468484 intergenic not near genes chr3R 26855367 intron Lerp - chr3R_5_24465001 chr3R_24465001 D4-c1 2113 chr3R 22084616 22084625 chr3R 22084706 22084715 4 90 0.0 4.0 2.0 1.3 99 chr3R 22084616 intergenic not near genes chr3R 22084666 intergenic not near genes chr3R 22084715 intergenic not near genes chr3R_4_22080001 chr3R_22080001 D4-c1 2114 chr3R 22144969 22145005 chr3R 22145132 22145168 17 162 2.0 5.0 3.5 3.8 199 chr3R 22144969 intron SKIP + chr3R 22145068 intron SKIP + chr3R 22145168 intron SKIP + chr3R_17_22145001 chr3R_22145001 D4-c1 2115 chr3R 22153585 22153600 chr3R 22153666 22153681 10 81 4.5 7.5 6.0 1.4 96 chr3R 22153585 intron SKIP + chr3R 22153633 intron SKIP + chr3R 22153681 intron SKIP + chr3R_10_22150001 chr3R_22150001 D4-c1 2116 chr3R 22234085 22234097 chr3R 22234163 22234175 8 78 7.5 7.5 7.5 0.9 90 chr3R 22234085 intron SKIP + chr3R 22234130 intron SKIP + chr3R 22234175 intron SKIP + chr3R_8_22230001 chr3R_22230001 D4-c1 2117 chr3R 22234683 22234714 chr3R 22236003 22236034 pogo 18 1319 1.5 4.5 3.0 4.5 1351 chr3R 22234683 intron SKIP + chr3R 22235358 intron SKIP + chr3R 22236034 intron SKIP + chr3R_18_22235001 chr3R_22235001 D4-c1 2118 chr3R 22239489 22239502 chr3R 22248550 22248563 roo 5 9061 9.5 0.0 4.8 0.9 9074 chr3R 22239489 intron SKIP + chr3R 22244026 intron SKIP + chr3R 22248563 intron SKIP + chr3R_5_22240001 chr3R_22240001 D4-c1 2119 chr3R 22252819 22252852 chr3R 22252925 22252958 20 103 7.0 0.5 3.8 4.2 139 chr3R 22252819 intron SKIP + chr3R 22252888 intron SKIP + chr3R 22252958 intron SKIP + chr3R_20_22250001 chr3R_22250001 D4-c1 2120 chr3R 22253848 22253877 chr3R 22253925 22253953 16 77 4.0 4.0 4.0 3.2 105 chr3R 22253848 intron SKIP + chr3R 22253900 intron SKIP + chr3R 22253953 intron SKIP + chr3R_16_22250001 chr3R_22250001 D4-c1 2121 chr3R 22286145 22286165 chr3R 22286223 22286243 4 78 2.5 5.5 4.0 0.8 98 chr3R 22286145 intron SKIP + chr3R 22286194 intron SKIP + chr3R 22286243 intron SKIP + chr3R_4_22285001 chr3R_22285001 D4-c1 2122 chr3R 22433090 22433102 chr3R 22433191 22433200 8 101 6.5 6.5 6.5 1.1 110 chr3R 22433090 intron CG13847 - chr3R 22433145 intron CG13847 - chr3R 22433200 intron CG13847 - chr3R_8_22430001 chr3R_22430001 D4-c1 2123 chr3R 22437793 22437820 chr3R 22437884 22437911 10 91 4.0 2.5 3.2 2.4 118 chr3R 22437793 intergenic not near genes chr3R 22437852 intergenic not near genes chr3R 22437911 intergenic not near genes chr3R_10_22435001 chr3R_22435001 D4-c1 2124 chr3R 22450540 22450579 chr3R 22453181 22453220 NOF 14 2640 4.5 4.5 4.5 2.5 2680 chr3R 22450540 intron CG34376 + chr3R 22451880 intron CG34376 + chr3R 22453220 intron CG34376 + chr3R_14_22450001 chr3R_22450001 D4-c1 2125 chr3R 22531073 22531105 chr3R 22531160 22531192 18 87 4.5 5.0 4.8 3.1 119 chr3R 22531073 exon CG33093 - chr3R 22531132 exon CG33093 - chr3R 22531192 exon CG33093 - chr3R_18_22530001 chr3R_22530001 D4-c1 2126 chr3R 22538440 22538474 chr3R 22538526 22538559 16 86 4.5 4.5 4.5 2.9 119 chr3R 22538440 intron CG5326 - chr3R 22538500 intron CG5326 - chr3R 22538559 intron CG5326 - chr3R_16_22535001 chr3R_22535001 D4-c1 2127 chr3R 22640699 22640734 chr3R 22640815 22640850 15 115 3.5 5.5 4.5 2.7 151 chr3R 22640699 intron wake + chr3R 22640774 intron wake + chr3R 22640850 intron wake + chr3R_15_22640001 chr3R_22640001 D4-c1 2128 chr3R 22657665 22657696 chr3R 22657744 22657775 10 79 2.0 5.0 3.5 2.2 110 chr3R 22657665 intron wake + chr3R 22657720 intron wake + chr3R 22657775 intron wake + chr3R_10_22655001 chr3R_22655001 D4-c1 2129 chr3R 22672299 22672334 chr3R 22672393 22672428 8 94 1.0 2.5 1.8 2.9 129 chr3R 22672299 intron wake + chr3R 22672364 intron wake + chr3R 22672428 intron wake + chr3R_8_22670001 chr3R_22670001 D4-c1 2130 chr3R 22769088 22769125 chr3R 22769166 22769203 17 78 3.0 4.5 3.8 3.5 115 chr3R 22769088 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769146 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769203 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R_17_22765001 chr3R_22765001 D4-c1 2131 chr3R 22846788 22846817 chr3R 22847010 22847038 16 221 6.0 4.5 5.2 2.6 250 chr3R 22846788 intergenic CG4704 - chr3R 22846913 intergenic not near genes chr3R 22847038 intergenic not near genes chr3R_16_22845001 chr3R_22845001 D4-c1 2132 chr3R 22880600 22880613 chr3R 22880678 22880691 8 77 7.5 9.5 8.5 0.8 91 chr3R 22880600 intergenic not near genes chr3R 22880646 intergenic not near genes chr3R 22880691 intergenic not near genes chr3R_8_22880001 chr3R_22880001 D4-c1 2133 chr3R 22880935 22880953 chr3R 22881074 22881092 8 139 6.0 3.0 4.5 1.5 157 chr3R 22880935 intergenic not near genes chr3R 22881014 intergenic not near genes chr3R 22881092 intergenic not near genes chr3R_8_22880001 chr3R_22880001 D4-c1 2134 chr3R 22881192 22881217 chr3R 22884899 22884924 Doc 11 3707 6.0 2.0 4.0 2.2 3732 chr3R 22881192 intergenic not near genes chr3R 22883058 intergenic not near genes chr3R 22884924 intergenic not near genes chr3R_11_22880001 chr3R_22880001 D4-c1 2135 chr3R 22889012 22889045 chr3R 22889090 22889123 10 78 4.5 4.5 4.5 1.8 111 chr3R 22889012 intergenic not near genes chr3R 22889068 intergenic not near genes chr3R 22889123 intergenic not near genes chr3R_10_22885001 chr3R_22885001 D4-c1 2136 chr3R 22974283 22974310 chr3R 22974368 22974395 14 85 2.0 6.0 4.0 2.8 112 chr3R 22974283 intergenic not near genes chr3R 22974339 intergenic not near genes chr3R 22974395 intergenic not near genes chr3R_14_22970001 chr3R_22970001 D4-c1 2137 chr3R 23070658 23070661 chr3R 23070738 23070742 4 81 3.0 0.0 1.5 1.6 84 chr3R 23070658 3` UTR CG13830 - chr3R 23070700 3` UTR CG13830 - chr3R 23070742 3` UTR CG13830 - chr3R_4_23070001 chr3R_23070001 D4-c1 2138 chr3R 23083757 23083788 chr3R 23083865 23083897 10 107 5.0 10.0 7.5 1.2 140 chr3R 23083757 intron CG13830 - chr3R 23083827 intron CG13830 - chr3R 23083897 intron CG13830 - chr3R_10_23080001 chr3R_23080001 D4-c1 2139 chr3R 23100153 23100441 chr3R 23100241 23100523 36 86 5.0 3.0 4.0 7.2 370 chr3R 23100153 intron,exon CG13830 -,CG6738 + chr3R 23100338 intron,exon CG13830 -,CG6738 + chr3R 23100523 intron,exon CG13830 -,CG6738 + chr3R_36_23100001 chr3R_23100001 D4-c1 2140 chr3R 23197969 23197981 chr3R 23198049 23198061 4 80 3.0 4.5 3.8 0.8 92 chr3R 23197969 exon cnc - chr3R 23198015 intron cnc - chr3R 23198061 intron cnc - chr3R_4_23195001 chr3R_23195001 D4-c1 2141 chr3R 23346567 23346579 chr3R 23346647 23346659 5 80 4.5 4.5 4.5 0.9 92 chr3R 23346567 intergenic pnt - chr3R 23346613 intergenic pnt - chr3R 23346659 intergenic pnt - chr3R_5_23345001 chr3R_23345001 D4-c1 2142 chr3R 23385588 23385620 chr3R 23385711 23385743 16 123 3.5 2.5 3.0 4.0 155 chr3R 23385588 intergenic not near genes chr3R 23385666 intergenic not near genes chr3R 23385743 intergenic not near genes chr3R_16_23385001 chr3R_23385001 D4-c1 2143 chr3R 23497462 23497496 chr3R 23497556 23497591 17 95 4.5 7.0 5.8 2.5 129 chr3R 23497462 intergenic not near genes chr3R 23497526 intergenic not near genes chr3R 23497591 intergenic not near genes chr3R_17_23495001 chr3R_23495001 D4-c1 2144 chr3R 23498516 23498541 chr3R 23498855 23498880 10 340 32.0 34.0 33.0 0.3 364 chr3R 23498516 intergenic not near genes chr3R 23498698 intergenic not near genes chr3R 23498880 intergenic not near genes chr3R_10_23495001 chr3R_23495001 D4-c1 2145 chr3R 23536951 23536978 chr3R 23537134 23537161 6 183 3.0 6.5 4.8 1.0 210 chr3R 23536951 intergenic CG10168 -,CG16732 - chr3R 23537056 exon CG10168 - chr3R 23537161 exon CG10168 - chr3R_6_23535001 chr3R_23535001 D4-c1 2146 chr3R 23558406 23558425 chr3R 23560188 23560207 Bari1 8 1781 2.5 9.0 5.8 1.2 1801 chr3R 23558406 intron beat-IV + chr3R 23559306 intron beat-IV + chr3R 23560207 intron beat-IV + chr3R_8_23555001 chr3R_23555001 D4-c1 2147 chr3R 23564445 23564474 chr3R 23564590 23564619 14 144 3.5 6.5 5.0 2.3 174 chr3R 23564445 intron beat-IV + chr3R 23564532 intron beat-IV + chr3R 23564619 intron beat-IV + chr3R_14_23560001 chr3R_23560001 D4-c1 2148 chr3R 23617918 23617953 chr3R 23618023 23618058 9 105 2.0 2.5 2.2 2.8 140 chr3R 23617918 intron CG31145 - chr3R 23617988 intron CG31145 - chr3R 23618058 intron CG31145 - chr3R_9_23615001 chr3R_23615001 D4-c1 2149 chr3R 3586630 3586635 chr3R 23642150 23642163 5 20055522 27.0 16.5 21.8 0.2 20055533 chr3R 3586630 intron Parp - chr3R 13614396 intergenic not near genes chr3R 23642163 intron CG31145 - chr3R_5_13610001 chr3R_13610001 D4-c1 2150 chr3R 23684696 23684729 chr3R 23685181 23685204 roo 26 486 8.0 10.5 9.2 2.5 508 chr3R 23684696 exon CG18754 + chr3R 23684950 intron CG18754 + chr3R 23685204 exon CG18754 + chr3R_26_23680001 chr3R_23680001 D4-c1 2151 chr3R 23688478 23688483 chr3R 23688565 23688575 7 91 9.5 6.5 8.0 0.8 97 chr3R 23688478 intergenic SPE + chr3R 23688526 intergenic SPE +,CG10254 - chr3R 23688575 intergenic SPE +,CG10254 - chr3R_7_23685001 chr3R_23685001 D4-c1 2152 chr3R 23688484 23688498 chr3R 23688564 23688590 8 89 5.0 6.5 5.8 1.2 106 chr3R 23688484 intergenic SPE + chr3R 23688537 intergenic SPE +,CG10254 - chr3R 23688590 intergenic CG10254 -,SPE + chr3R_8_23685001 chr3R_23685001 D4-c1 2153 chr3R 23835407 23835424 chr3R 23844558 23844575 roo 4 9151 8.5 0.0 4.2 0.8 9168 chr3R 23835407 intron CG34355 + chr3R 23839991 intron CG34355 + chr3R 23844575 intron CG34355 + chr3R_4_23835001 chr3R_23835001 D4-c1 2154 chr3R 23944903 23944934 chr3R 23944989 23945020 9 86 5.0 6.0 5.5 1.4 117 chr3R 23944903 intron CG12268 - chr3R 23944962 intron CG12268 - chr3R 23945020 exon CG12268 - chr3R_9_23940001 chr3R_23940001 D4-c1 2155 chr3R 23949039 23949070 chr3R 23949117 23949148 15 78 5.0 3.0 4.0 3.0 109 chr3R 23949039 intergenic not near genes chr3R 23949094 intergenic not near genes chr3R 23949148 intergenic not near genes chr3R_15_23945001 chr3R_23945001 D4-c1 2156 chr3R 24013875 24013889 chr3R 24015719 24015733 6 1843 5.0 3.5 4.2 1.2 1858 chr3R 24013875 intron KrT95D - chr3R 24014804 intron KrT95D - chr3R 24015733 intron KrT95D - chr3R_6_24010001 chr3R_24010001 D4-c1 2157 chr3R 24020825 24020844 chr3R 24021319 24021338 8 494 3.0 0.0 1.5 3.2 513 chr3R 24020825 intron KrT95D - chr3R 24021082 intron KrT95D - chr3R 24021338 intron KrT95D - chr3R_8_24020001 chr3R_24020001 D4-c1 2158 chr3R 24042001 24042027 chr3R 24042115 24042141 10 112 3.0 6.5 4.8 1.7 140 chr3R 24042001 3` UTR spas + chr3R 24042071 3` UTR spas + chr3R 24042141 3` UTR spas + chr3R_10_24040001 chr3R_24040001 D4-c1 2159 chr3R 24072082 24072095 chr3R 24072521 24072534 jockey 8 439 19.0 0.0 9.5 0.8 452 chr3R 24072082 intron 4EHP - chr3R 24072308 intron 4EHP - chr3R 24072534 intron 4EHP - chr3R_8_24070001 chr3R_24070001 D4-c1 2160 chr3R 24076917 24076944 chr3R 24078385 24078412 hobo 12 1468 5.5 6.0 5.8 1.8 1495 chr3R 24076917 intron 4EHP - chr3R 24077664 intron 4EHP - chr3R 24078412 intron 4EHP - chr3R_12_24075001 chr3R_24075001 D4-c1 2161 chr3R 24096558 24096580 chr3R 24097091 24097108 6 532 2.5 2.5 2.5 1.7 550 chr3R 24096558 intron 4EHP - chr3R 24096833 intron 4EHP - chr3R 24097108 intron 4EHP - chr3R_6_24095001 chr3R_24095001 D4-c1 2162 chr3R 24199740 24199772 chr3R 24199821 24199853 12 81 2.5 4.5 3.5 2.7 113 chr3R 24199740 intron twin - chr3R 24199796 intron twin - chr3R 24199853 intron twin - chr3R_12_24195001 chr3R_24195001 D4-c1 2163 chr3R 24205782 24205815 chr3R 24206283 24206316 14 500 2.5 2.5 2.5 4.0 534 chr3R 24205782 intron twin - chr3R 24206049 intron twin - chr3R 24206316 intron twin - chr3R_14_24205001 chr3R_24205001 D4-c1 2164 chr3R 24207219 24207245 chr3R 24212296 24212322 flea 12 5077 11.0 9.5 10.2 1.1 5103 chr3R 24207219 intron twin - chr3R 24209770 intron twin - chr3R 24212322 intron twin - chr3R_12_24205001 chr3R_24205001 D4-c1 2165 chr3R 21907535 21907536 chr3R 24389465 24389465 10 2481929 34.0 20.5 27.2 0.4 2481930 chr3R 21907535 intergenic CG6678 + chr3R 23148500 intergenic not near genes chr3R 24389465 intron CG5768 - chr3R_10_23145001 chr3R_23145001 D4-c1 2166 chr3R 24730089 24730110 chr3R 24732468 24732489 Doc 10 2379 3.0 0.5 1.8 3.6 2400 chr3R 24730089 intron tok + chr3R 24731289 intron tok + chr3R 24732489 intron tok + chr3R_10_24730001 chr3R_24730001 D4-c1 2167 chr3R 24927126 24927154 chr3R 24931914 24931946 Doc 11 4792 5.5 2.5 4.0 2.2 4820 chr3R 24927126 intergenic Trf4-2 + chr3R 24929536 intergenic not near genes chr3R 24931946 intergenic CG11771 + chr3R_11_24925001 chr3R_24925001 D4-c1 2168 chr3R 25004899 25004922 chr3R 25004983 25005006 14 84 0.0 3.0 1.5 5.6 107 chr3R 25004899 intron tnc + chr3R 25004952 intron tnc + chr3R 25005006 intron tnc + chr3R_14_25000001 chr3R_25000001 D4-c1 2169 chr3R 25018254 25018291 chr3R 25018332 25018369 18 78 4.0 4.0 4.0 3.6 115 chr3R 25018254 exon tnc + chr3R 25018312 exon tnc + chr3R 25018369 exon tnc + chr3R_18_25015001 chr3R_25015001 D4-c1 2170 chr3R 25136396 25136426 chr3R 25136477 25136507 7 81 3.5 2.0 2.8 1.8 111 chr3R 25136396 3` UTR Bili + chr3R 25136452 3` UTR Bili + chr3R 25136507 3` UTR Bili + chr3R_7_25135001 chr3R_25135001 D4-c1 2171 chr3R 25689132 25689144 chr3R 25689241 25689253 6 109 7.5 8.5 8.0 0.7 121 chr3R 25689132 intergenic not near genes chr3R 25689192 intergenic not near genes chr3R 25689253 intergenic not near genes chr3R_6_25685001 chr3R_25685001 D4-c1 2172 chr3R 25689149 25689164 chr3R 25689238 25689273 8 106 2.5 7.5 5.0 1.3 124 chr3R 25689149 intergenic not near genes chr3R 25689211 intergenic not near genes chr3R 25689273 intergenic not near genes chr3R_8_25685001 chr3R_25685001 D4-c1 2173 chr3R 25721917 25721952 chr3R 25722322 25722357 9 405 1.0 4.5 2.8 2.4 440 chr3R 25721917 intron LpR2 - chr3R 25722137 intron LpR2 - chr3R 25722357 intron LpR2 - chr3R_9_25720001 chr3R_25720001 D4-c1 2174 chr3R 25725832 25725857 chr3R 25734991 25735018 roo 7 9161 2.5 5.5 4.0 1.4 9186 chr3R 25725832 intron LpR2 - chr3R 25730425 intron LpR2 - chr3R 25735018 intron LpR2 - chr3R_7_25730001 chr3R_25730001 D4-c1 2175 chr3R 25805371 25805405 chr3R 25805576 25805610 17 205 4.5 5.5 5.0 2.8 239 chr3R 25805371 intergenic not near genes chr3R 25805490 intergenic not near genes chr3R 25805610 intergenic not near genes chr3R_17_25805001 chr3R_25805001 D4-c1 2176 chr3R 25831256 25831262 chr3R 25831390 25831396 5 134 13.5 9.5 11.5 0.4 140 chr3R 25831256 intergenic Mst57Da -,Mst57Db - chr3R 25831326 intergenic Mst57Da -,Mst57Db - chr3R 25831396 intergenic Mst57Da -,Mst57Db - chr3R_5_25830001 chr3R_25830001 D4-c1 2177 chr3R 25832693 25832723 chr3R 25841876 25841906 roo 13 9183 4.0 8.5 6.2 1.8 9213 chr3R 25832693 exon alpha4GT2 + chr3R 25837300 intron alpha4GT2 + chr3R 25841906 exon alpha4GT2 + chr3R_13_25835001 chr3R_25835001 D4-c1 2178 chr3R 25843634 25843663 chr3R 25843765 25843794 9 131 1.0 2.5 1.8 3.2 160 chr3R 25843634 intergenic CR45653 + chr3R 25843714 intergenic CR45653 + chr3R 25843794 intergenic CR45653 + chr3R_9_25840001 chr3R_25840001 D4-c1 2179 chr3R 25885280 25885314 chr3R 25885367 25885401 12 87 8.0 6.0 7.0 1.5 121 chr3R 25885280 5` UTR SppL + chr3R 25885340 intron SppL + chr3R 25885401 5` UTR SppL + chr3R_12_25885001 chr3R_25885001 D4-c1 2180 chr3R 25927505 25927531 chr3R 25927588 25927614 8 82 5.5 5.0 5.2 1.3 109 chr3R 25927505 intron CCAP-R - chr3R 25927560 intron CCAP-R - chr3R 25927614 intron CCAP-R - chr3R_8_25925001 chr3R_25925001 D4-c1 2181 chr3R 26060402 26060433 chr3R 26060489 26060520 17 87 5.5 5.5 5.5 2.6 118 chr3R 26060402 intron CG14544 + chr3R 26060461 intron CG14544 + chr3R 26060520 intron CG14544 + chr3R_17_26060001 chr3R_26060001 D4-c1 2182 chr3R 26071197 26071209 chr3R 26071281 26071293 5 84 6.0 5.5 5.8 0.7 96 chr3R 26071197 3` UTR CR44950 - chr3R 26071245 3` UTR CR44950 - chr3R 26071293 intron CR44950 - chr3R_5_26070001 chr3R_26070001 D4-c1 2183 chr3R 26093843 26093873 chr3R 26093922 26093952 13 79 6.0 3.5 4.8 2.2 109 chr3R 26093843 intron dys - chr3R 26093898 intron dys - chr3R 26093952 intron dys - chr3R_13_26090001 chr3R_26090001 D4-c1 2184 chr3R 26108825 26108841 chr3R 26117409 26117425 Tirant 9 8583 4.5 0.0 2.2 2.8 8600 chr3R 26108825 5` UTR CG31324 + chr3R 26113125 intron CG31324 + chr3R 26117425 intron CG31324 + chr3R_9_26110001 chr3R_26110001 D4-c1 2185 chr3R 26140016 26140025 chr3R 26140095 26140097 11 78 2.5 9.0 5.8 1.6 81 chr3R 26140016 intergenic not near genes chr3R 26140056 intergenic not near genes chr3R 26140097 intergenic not near genes chr3R_11_26140001 chr3R_26140001 D4-c1 2186 chr3R 26284238 26284255 chr3R 26284346 26284363 7 108 3.0 6.5 4.8 1.2 125 chr3R 26284238 intergenic not near genes chr3R 26284300 intergenic not near genes chr3R 26284363 intergenic not near genes chr3R_7_26280001 chr3R_26280001 D4-c1 2187 chr3R 26294714 26294748 chr3R 26294793 26294827 16 79 3.5 4.5 4.0 3.2 113 chr3R 26294714 intergenic not near genes chr3R 26294770 intergenic not near genes chr3R 26294827 intergenic not near genes chr3R_16_26290001 chr3R_26290001 D4-c1 2188 chr3R 26376325 26376356 chr3R 26385486 26385517 roo 18 9157 3.5 0.0 1.8 6.4 9192 chr3R 26376325 intergenic not near genes chr3R 26380921 intergenic not near genes chr3R 26385517 intergenic not near genes chr3R_18_26380001 chr3R_26380001 D4-c1 2189 chr3R 26390452 26390488 chr3R 26390548 26390584 15 96 5.5 3.5 4.5 2.7 132 chr3R 26390452 intergenic not near genes chr3R 26390518 intergenic not near genes chr3R 26390584 intergenic not near genes chr3R_15_26390001 chr3R_26390001 D4-c1 2190 chr3R 26405921 26405938 chr3R 26405998 26406015 7 77 1.5 3.0 2.2 2.2 94 chr3R 26405921 intergenic not near genes chr3R 26405968 intergenic not near genes chr3R 26406015 intergenic not near genes chr3R_7_26405001 chr3R_26405001 D4-c1 2191 chr3R 26456782 26456809 chr3R 26459324 26459351 11 2543 45.0 27.0 36.0 0.3 2569 chr3R 26456782 intergenic CG14237 + chr3R 26458066 intergenic CG14238 + chr3R 26459351 exon CG14238 + chr3R_11_26455001 chr3R_26455001 D4-c1 2192 chr3R 26510521 26510534 chr3R 26519577 26519590 roo 6 9056 3.0 3.5 3.2 1.4 9069 chr3R 26510521 intron plum - chr3R 26515056 intron plum - chr3R 26519590 intron,5` UTR plum -,CR45226 + chr3R_6_26515001 chr3R_26515001 D4-c1 2193 chr3R 26542043 26542079 chr3R 26542135 26542171 6 92 4.5 3.5 4.0 1.2 128 chr3R 26542043 intron scrib + chr3R 26542107 intron scrib + chr3R 26542171 intron scrib + chr3R_6_26540001 chr3R_26540001 D4-c1 2194 chr3R 26558325 26558360 chr3R 26565639 26565672 Stalker4 15 7312 3.0 4.0 3.5 3.3 7347 chr3R 26558325 intron scrib + chr3R 26561998 intron scrib + chr3R 26565672 intron scrib + chr3R_15_26560001 chr3R_26560001 D4-c1 2195 chr3R 26575006 26575036 chr3R 26575086 26575116 22 80 4.5 6.5 5.5 3.4 110 chr3R 26575006 exon scrib + chr3R 26575061 intron scrib + chr3R 26575116 intron scrib + chr3R_22_26575001 chr3R_26575001 D4-c1 2196 chr3R 26641635 26641663 chr3R 26641723 26641751 20 88 4.0 6.5 5.2 3.2 116 chr3R 26641635 intergenic not near genes chr3R 26641693 intergenic not near genes chr3R 26641751 intergenic not near genes chr3R_20_26640001 chr3R_26640001 D4-c1 2197 chr3R 26642729 26642760 chr3R 26643123 26643154 jockey 13 394 7.5 5.0 6.2 1.8 425 chr3R 26642729 intergenic not near genes chr3R 26642942 intergenic not near genes chr3R 26643154 intergenic not near genes chr3R_13_26640001 chr3R_26640001 D4-c1 2198 chr3R 26669663 26669691 chr3R 26669746 26669774 13 83 3.0 4.5 3.8 2.7 111 chr3R 26669663 intron beat-VII - chr3R 26669718 intron beat-VII - chr3R 26669774 intron beat-VII - chr3R_13_26665001 chr3R_26665001 D4-c1 2199 chr3R 26727615 26727647 chr3R 26727754 26727786 11 139 3.0 4.5 3.8 2.3 171 chr3R 26727615 intron CG14246 + chr3R 26727700 intron CG14246 + chr3R 26727786 intron CG14246 + chr3R_11_26725001 chr3R_26725001 D4-c1 2200 chr3R 26770240 26770274 chr3R 26770318 26770352 10 78 1.5 5.0 3.2 2.4 112 chr3R 26770240 intergenic CR45563 + chr3R 26770296 intergenic CR45563 + chr3R 26770352 intergenic not near genes chr3R_10_26770001 chr3R_26770001 D4-c1 2201 chr3R 26810551 26810579 chr3R 26811037 26811065 roo 8 486 4.0 7.0 5.5 1.2 514 chr3R 26810551 intron Tl + chr3R 26810808 intron Tl + chr3R 26811065 intron Tl + chr3R_8_26810001 chr3R_26810001 D4-c1 2202 chr3R 26816742 26816760 chr3R 26816836 26816854 10 94 6.0 8.5 7.2 1.2 112 chr3R 26816742 intron Tl + chr3R 26816798 intron Tl + chr3R 26816854 intron Tl + chr3R_10_26815001 chr3R_26815001 D4-c1 2203 chr3R 26845570 26845604 chr3R 26845651 26845685 14 81 6.0 4.0 5.0 2.3 115 chr3R 26845570 intron Lerp - chr3R 26845628 intron Lerp - chr3R 26845685 intron Lerp - chr3R_14_26845001 chr3R_26845001 D4-c1 2204 chr3R 26898237 26898272 chr3R 26898326 26898361 15 89 3.5 1.0 2.2 4.7 124 chr3R 26898237 intron T48 + chr3R 26898299 intron T48 + chr3R 26898361 intron T48 + chr3R_15_26895001 chr3R_26895001 D4-c1 2205 chr3R 26981089 26981117 chr3R 26981175 26981203 12 86 3.0 3.5 3.2 2.9 114 chr3R 26981089 intron CG14253 + chr3R 26981146 intron CG14253 + chr3R 26981203 intron CG14253 + chr3R_12_26980001 chr3R_26980001 D4-c1 2206 chr3R 27007409 27007438 chr3R 27016545 27016574 roo 9 9134 3.0 6.0 4.5 1.6 9165 chr3R 27007409 intron RYa-R + chr3R 27011992 intron RYa-R + chr3R 27016574 intron RYa-R + chr3R_9_27010001 chr3R_27010001 D4-c1 2207 chr3R 27027692 27027704 chr3R 27027775 27027787 5 83 1.5 5.5 3.5 1.1 95 chr3R 27027692 intron RYa-R + chr3R 27027740 intron RYa-R + chr3R 27027787 intron RYa-R + chr3R_5_27025001 chr3R_27025001 D4-c1 2208 chr3R 27028727 27028751 chr3R 27028807 27028831 6 80 4.5 3.0 3.8 1.2 104 chr3R 27028727 intron RYa-R + chr3R 27028779 intron RYa-R + chr3R 27028831 intron RYa-R + chr3R_6_27025001 chr3R_27025001 D4-c1 2209 chr3R 27034542 27034575 chr3R 27035070 27035103 19 528 6.5 4.5 5.5 2.9 561 chr3R 27034542 intron RYa-R + chr3R 27034822 intron RYa-R + chr3R 27035103 intron RYa-R + chr3R_19_27030001 chr3R_27030001 D4-c1 2210 chr3R 27140512 27140548 chr3R 27148123 27148159 412 14 7611 7.5 5.0 6.2 1.9 7647 chr3R 27140512 intron CG6051 - chr3R 27144336 intron CG6051 - chr3R 27148159 intron CG6051 - chr3R_14_27140001 chr3R_27140001 D4-c1 2211 chr3R 27292276 27292302 chr3R 27292389 27292415 9 113 6.0 1.5 3.8 1.9 139 chr3R 27292276 intergenic CG3348 - chr3R 27292346 intergenic CG3348 - chr3R 27292415 intergenic CG3348 - chr3R_9_27290001 chr3R_27290001 D4-c1 2212 chr3R 27342790 27342826 chr3R 27351372 27351408 Tirant 19 8582 4.5 7.0 5.8 2.8 8618 chr3R 27342790 intron CG42534 + chr3R 27347099 intron CG42534 + chr3R 27351408 intron CG42534 + chr3R_19_27345001 chr3R_27345001 D4-c1 2213 chr3R 27377470 27377503 chr3R 27377559 27377592 14 87 6.0 3.5 4.8 2.4 122 chr3R 27377470 3` UTR side - chr3R 27377531 3` UTR side - chr3R 27377592 3` UTR side - chr3R_14_27375001 chr3R_27375001 D4-c1 2214 chr3R 27385687 27385722 chr3R 27385959 27385994 12 272 2.5 3.5 3.0 3.0 307 chr3R 27385687 intron side - chr3R 27385840 intron side - chr3R 27385994 intron side - chr3R_12_27385001 chr3R_27385001 D4-c1 2215 chr3R 27397241 27397253 chr3R 27397318 27397330 9 77 0.5 12.5 6.5 1.2 89 chr3R 27397241 intron side - chr3R 27397286 intron side - chr3R 27397330 intron side - chr3R_9_27395001 chr3R_27395001 D4-c1 2216 chr3R 27521154 27521188 chr3R 27530364 27530398 roo 13 9210 6.5 4.5 5.5 2.0 9244 chr3R 27521154 intron CG12885 + chr3R 27525776 intron CG12885 + chr3R 27530398 intron CG12885 + chr3R_13_27525001 chr3R_27525001 D4-c1 2217 chr3R 27679935 27679969 chr3R 27680059 27680093 23 122 7.0 5.5 6.2 3.2 158 chr3R 27679935 exon CG12883 + chr3R 27680014 3` UTR CG12883 + chr3R 27680093 3` UTR CG12883 + chr3R_23_27680001 chr3R_27680001 D4-c1 2218 chr3R 27685763 27685793 chr3R 27685843 27685873 13 80 5.0 4.0 4.5 2.4 110 chr3R 27685763 3` UTR CG31055 - chr3R 27685818 3` UTR CG31055 - chr3R 27685873 3` UTR CG31055 - chr3R_13_27685001 chr3R_27685001 D4-c1 2219 chr3R 27706773 27706809 chr3R 27706851 27706887 14 77 3.5 5.0 4.2 2.7 114 chr3R 27706773 intergenic CG12428 -,CG12877 + chr3R 27706830 intergenic CG12428 -,CG12877 + chr3R 27706887 intergenic CG12428 -,CG12877 + chr3R_14_27705001 chr3R_27705001 D4-c1 2220 chr3R 27718575 27718600 chr3R 27718655 27718680 11 80 5.5 4.5 5.0 1.8 105 chr3R 27718575 intergenic not near genes chr3R 27718628 intergenic not near genes chr3R 27718680 intergenic not near genes chr3R_11_27715001 chr3R_27715001 D4-c1 2221 chr3R 27725565 27725597 chr3R 27731008 27731040 I-element 13 5443 5.0 7.5 6.2 1.8 5475 chr3R 27725565 intergenic not near genes chr3R 27728302 intergenic not near genes chr3R 27731040 intergenic not near genes chr3R_13_27725001 chr3R_27725001 D4-c1 2222 chr3R 27779274 27779286 chr3R 27779349 27779367 8 80 7.0 13.0 10.0 0.7 93 chr3R 27779274 exon CG34353 - chr3R 27779320 intron CG34353 - chr3R 27779367 intron CG34353 - chr3R_8_27775001 chr3R_27775001 D4-c1 2223 chr3R 27789081 27789109 chr3R 27789159 27789187 12 78 5.5 4.5 5.0 2.0 106 chr3R 27789081 exon CG34353 - chr3R 27789134 intron CG34353 - chr3R 27789187 intron CG34353 - chr3R_12_27785001 chr3R_27785001 D4-c1 2224 chr3R 27856756 27856792 chr3R 27858240 27858276 hopper2 15 1484 6.5 3.0 4.8 2.6 1520 chr3R 27856756 intron CG34353 - chr3R 27857516 intron CG34353 - chr3R 27858276 intron CG34353 - chr3R_15_27855001 chr3R_27855001 D4-c1 2225 chr3R 27862952 27862981 chr3R 27868258 27868287 Transpac 7 5306 4.5 5.5 5.0 1.2 5335 chr3R 27862952 intron CG34353 - chr3R 27865620 intron CG34353 - chr3R 27868287 intron CG34353 - chr3R_7_27865001 chr3R_27865001 D4-c1 2226 chr3R 27875699 27875733 chr3R 27882755 27882789 297 14 7056 3.0 5.5 4.2 2.7 7090 chr3R 27875699 intron CG34353 - chr3R 27879244 intron CG34353 - chr3R 27882789 intron CG34353 - chr3R_14_27875001 chr3R_27875001 D4-c1 2227 chr3R 27941667 27941686 chr3R 27941765 27941785 16 99 6.5 4.5 5.5 2.5 118 chr3R 27941667 exon CG5514 + chr3R 27941726 exon CG5514 + chr3R 27941785 exon CG5514 + chr3R_16_27940001 chr3R_27940001 D4-c1 2228 chr3R 27973853 27973882 chr3R 27973935 27973964 13 82 4.5 7.0 5.8 1.9 111 chr3R 27973853 intron betaTub97EF - chr3R 27973908 intron betaTub97EF - chr3R 27973964 intron betaTub97EF - chr3R_13_27970001 chr3R_27970001 D4-c1 2229 chr3R 28068501 28068527 chr3R 28073944 28073969 I-element 13 5442 2.5 7.0 4.8 2.2 5468 chr3R 28068501 intron CG34362 + chr3R 28071235 intron CG34362 + chr3R 28073969 intron CG34362 + chr3R_13_28070001 chr3R_28070001 D4-c1 2230 chr3R 28173670 28173704 chr3R 28181101 28181135 mdg1 16 7431 0.5 3.0 1.8 5.7 7465 chr3R 28173670 intron CG34354 + chr3R 28177402 intron CG34354 + chr3R 28181135 intron CG34354 + chr3R_16_28175001 chr3R_28175001 D4-c1 2231 chr3R 28253337 28253370 chr3R 28255848 28255881 jockey 21 2511 1.5 7.5 4.5 3.8 2544 chr3R 28253337 intergenic not near genes chr3R 28254609 intergenic not near genes chr3R 28255881 intergenic not near genes chr3R_21_28250001 chr3R_28250001 D4-c1 2232 chr3R 28302099 28302133 chr3R 28302539 28302569 jockey 15 440 6.5 2.0 4.2 2.9 470 chr3R 28302099 intergenic not near genes chr3R 28302334 intergenic not near genes chr3R 28302569 intergenic not near genes chr3R_15_28300001 chr3R_28300001 D4-c1 2233 chr3R 28345646 28345673 chr3R 28345723 28345750 8 77 2.5 4.5 3.5 1.8 104 chr3R 28345646 intergenic Moca-cyp + chr3R 28345698 intergenic not near genes chr3R 28345750 intergenic not near genes chr3R_8_28345001 chr3R_28345001 D4-c1 2234 chr3R 28380787 28380826 chr3R 28381022 28381061 15 233 6.5 1.0 3.8 3.1 274 chr3R 28380787 intergenic not near genes chr3R 28380924 intergenic not near genes chr3R 28381061 intergenic not near genes chr3R_15_28380001 chr3R_28380001 D4-c1 2235 chr3R 28393699 28393948 chr3R 28393800 28394029 22 94 5.0 4.0 4.5 4.0 330 chr3R 28393699 intergenic not near genes chr3R 28393864 intergenic not near genes chr3R 28394029 intergenic not near genes chr3R_22_28390001 chr3R_28390001 D4-c1 2236 chr3R 28478413 28478450 chr3R 28478495 28478532 23 81 7.5 2.5 5.0 3.8 119 chr3R 28478413 intergenic not near genes chr3R 28478472 intergenic not near genes chr3R 28478532 intergenic not near genes chr3R_23_28475001 chr3R_28475001 D4-c1 2237 chr3R 28479148 28479165 chr3R 28479232 28479249 7 84 3.0 2.5 2.8 1.8 101 chr3R 28479148 intergenic not near genes chr3R 28479198 intergenic not near genes chr3R 28479249 intergenic not near genes chr3R_7_28475001 chr3R_28475001 D4-c1 2238 chr3R 28480324 28480331 chr3R 28480406 28480413 4 82 2.0 4.0 3.0 1.0 89 chr3R 28480324 intergenic not near genes chr3R 28480368 intergenic not near genes chr3R 28480413 intergenic not near genes chr3R_4_28480001 chr3R_28480001 D4-c1 2239 chr3R 28484353 28484376 chr3R 28486269 28486292 35 1917 48.5 76.5 62.5 0.6 1939 chr3R 28484353 intergenic CG1894 + chr3R 28485322 exon CG1894 + chr3R 28486292 intergenic CG1894 + chr3R_35_28485001 chr3R_28485001 D4-c1 2240 chr3R 28616474 28616502 chr3R 28616569 28616597 9 95 4.0 6.0 5.0 1.5 123 chr3R 28616474 intron CG10011 - chr3R 28616536 intron CG10011 - chr3R 28616597 intron CG10011 - chr3R_9_28615001 chr3R_28615001 D4-c1 2241 chr3R 28638919 28638952 chr3R 28640204 28640237 14 1284 22.0 27.5 24.8 0.5 1318 chr3R 28638919 intergenic CG9988 + chr3R 28639578 intergenic not near genes chr3R 28640237 intergenic not near genes chr3R_14_28635001 chr3R_28635001 D4-c1 2242 chr3R 28637818 28637844 chr3R 28640292 28640318 11 2475 52.0 27.0 39.5 0.3 2500 chr3R 28637818 exon CG9988 + chr3R 28639068 intergenic CG9988 + chr3R 28640318 intergenic not near genes chr3R_11_28635001 chr3R_28635001 D4-c1 2243 chr3R 28655411 28655419 chr3R 28655507 28655522 7 100 5.0 9.0 7.0 0.9 111 chr3R 28655411 intergenic not near genes chr3R 28655466 intergenic not near genes chr3R 28655522 intergenic not near genes chr3R_7_28655001 chr3R_28655001 D4-c1 2244 chr3R 28671435 28671468 chr3R 28671560 28671586 22 125 7.0 2.0 4.5 4.0 151 chr3R 28671435 exon CG9989 + chr3R 28671510 exon CG9989 + chr3R 28671586 exon CG9989 + chr3R_22_28670001 chr3R_28670001 D4-c1 2245 chr3R 28758284 28758298 chr3R 28763902 28763916 roo 8 5618 6.0 0.0 3.0 2.0 5632 chr3R 28758284 intergenic aqrs - chr3R 28761100 intergenic not near genes chr3R 28763916 intergenic not near genes chr3R_8_28760001 chr3R_28760001 D4-c1 2246 chr3R 28763901 28763917 chr3R 28771345 28771361 Stalker4 4 7444 0.0 1.5 0.8 2.2 7460 chr3R 28763901 intergenic not near genes chr3R 28767631 intergenic not near genes chr3R 28771361 intergenic not near genes chr3R_4_28765001 chr3R_28765001 D4-c1 2247 chr3R 28792872 28792899 chr3R 28797968 28797994 jockey 13 5096 4.0 3.5 3.8 2.7 5122 chr3R 28792872 intergenic not near genes chr3R 28795433 intergenic not near genes chr3R 28797994 intergenic not near genes chr3R_13_28795001 chr3R_28795001 D4-c1 2248 chr3R 21907534 21907536 chr3R 28831801 28831802 72 6924266 34.0 30.5 32.2 2.2 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_72_25365001 chr3R_25365001 D4-c1 2249 chr3R 28862146 28862168 chr3R 28862224 28862246 11 78 5.5 1.0 3.2 2.6 100 chr3R 28862146 intron spg + chr3R 28862196 intron spg + chr3R 28862246 intron spg + chr3R_11_28860001 chr3R_28860001 D4-c1 2250 chr3R 28962120 28962156 chr3R 28962576 28962612 16 456 5.0 3.0 4.0 3.2 492 chr3R 28962120 intron CG14521 - chr3R 28962366 intron CG14521 - chr3R 28962612 intron CG14521 - chr3R_16_28960001 chr3R_28960001 D4-c1 2251 chr3R 29054269 29054297 chr3R 29054365 29054393 8 96 0.0 2.0 1.0 4.0 124 chr3R 29054269 intergenic CG11843 +,CG11842 + chr3R 29054331 intergenic CG11843 +,CG11842 + chr3R 29054393 5` UTR CG11843 + chr3R_8_29050001 chr3R_29050001 D4-c1 2252 chr3R 29079398 29079408 chr3R 29080771 29080781 NOF 6 1373 0.0 4.0 2.0 2.0 1383 chr3R 29079398 intron CG11873 + chr3R 29080090 intron CG11873 + chr3R 29080781 intron CG11873 + chr3R_6_29080001 chr3R_29080001 D4-c1 2253 chr3R 29236809 29236815 chr3R 29247121 29247127 4 10312 29.5 28.5 29.0 0.1 10318 chr3R 29236809 exon CG11951 - chr3R 29241968 exon CG31445 - chr3R 29247127 exon SP1029 - chr3R_4_29240001 chr3R_29240001 D4-c1 2254 chr3R 29237245 29237283 chr3R 29239267 29239305 20 2022 22.5 8.5 15.5 1.2 2060 chr3R 29237245 exon CG11951 - chr3R 29238275 intron CG11951 - chr3R 29239305 exon CG31427 - chr3R_20_29235001 chr3R_29235001 D4-c1 2255 chr3R 29239229 29239248 chr3R 29245521 29245537 6 6290 9.5 23.5 16.5 0.3 6308 chr3R 29239229 exon CG31427 - chr3R 29242383 exon CG31445 - chr3R 29245537 exon SP1029 - chr3R_6_29240001 chr3R_29240001 D4-c1 2256 chr3R 29282809 29282819 chr3R 29282896 29282906 4 87 3.5 9.0 6.2 0.6 97 chr3R 29282809 intergenic not near genes chr3R 29282858 intergenic not near genes chr3R 29282906 intergenic not near genes chr3R_4_29280001 chr3R_29280001 D4-c1 2257 chr3R 29294903 29294938 chr3R 29294981 29295016 24 78 8.0 10.5 9.2 2.4 113 chr3R 29294903 3` UTR CG14506 - chr3R 29294960 3` UTR CG14506 - chr3R 29295016 3` UTR CG14506 - chr3R_24_29290001 chr3R_29290001 D4-c1 2258 chr3R 29319823 29319857 chr3R 29320143 29320177 jockey 12 320 1.0 2.0 1.5 4.8 354 chr3R 29319823 intergenic Cnx99A - chr3R 29320000 intergenic Cnx99A - chr3R 29320177 intergenic not near genes chr3R_12_29320001 chr3R_29320001 D4-c1 2259 chr3R 29351732 29351754 chr3R 29351818 29351840 13 86 5.5 3.0 4.2 2.5 108 chr3R 29351732 intergenic not near genes chr3R 29351786 intergenic not near genes chr3R 29351840 intergenic not near genes chr3R_13_29350001 chr3R_29350001 D4-c1 2260 chr3R 29356056 29356075 chr3R 29356136 29356155 10 80 4.5 4.0 4.2 1.9 99 chr3R 29356056 intergenic CR45547 - chr3R 29356106 intergenic CR45547 - chr3R 29356155 3` UTR CR45547 - chr3R_10_29355001 chr3R_29355001 D4-c1 2261 chr3R 29365392 29365408 chr3R 29365475 29365491 5 80 5.0 4.5 4.8 0.9 99 chr3R 29365392 intergenic not near genes chr3R 29365442 intergenic not near genes chr3R 29365491 intergenic not near genes chr3R_5_29365001 chr3R_29365001 D4-c1 2262 chr3R 29406616 29406646 chr3R 29407900 29407933 jockey 21 1286 4.5 7.0 5.8 3.1 1317 chr3R 29406616 intron Ptp99A + chr3R 29407274 intron Ptp99A + chr3R 29407933 intron Ptp99A + chr3R_21_29405001 chr3R_29405001 D4-c1 2263 chr3R 29446992 29447024 chr3R 29447080 29447112 17 88 3.0 2.5 2.8 4.5 120 chr3R 29446992 intron Ptp99A + chr3R 29447052 intron Ptp99A + chr3R 29447112 intron Ptp99A + chr3R_17_29445001 chr3R_29445001 D4-c1 2264 chr3R 29449355 29449390 chr3R 29449434 29449469 15 79 2.5 2.0 2.2 4.7 114 chr3R 29449355 intron Ptp99A + chr3R 29449412 intron Ptp99A + chr3R 29449469 intron Ptp99A + chr3R_15_29445001 chr3R_29445001 D4-c1 2265 chr3R 29452609 29452637 chr3R 29452709 29452737 13 99 0.0 4.0 2.0 4.3 128 chr3R 29452609 intron Ptp99A + chr3R 29452673 intron Ptp99A + chr3R 29452737 intron Ptp99A + chr3R_13_29450001 chr3R_29450001 D4-c1 2266 chr3R 29474427 29474461 chr3R 29474515 29474549 10 88 3.0 2.0 2.5 2.9 122 chr3R 29474427 intron Ptp99A + chr3R 29474488 intron Ptp99A + chr3R 29474549 intron Ptp99A + chr3R_10_29470001 chr3R_29470001 D4-c1 2267 chr3R 29505909 29505926 chr3R 29505987 29506004 7 78 3.0 9.0 6.0 1.0 95 chr3R 29505909 intergenic not near genes chr3R 29505956 intergenic not near genes chr3R 29506004 intergenic not near genes chr3R_7_29505001 chr3R_29505001 D4-c1 2268 chr3R 29539432 29539454 chr3R 29539509 29539531 7 77 5.0 0.0 2.5 2.0 99 chr3R 29539432 intergenic not near genes chr3R 29539482 intergenic not near genes chr3R 29539531 intergenic not near genes chr3R_7_29535001 chr3R_29535001 D4-c1 2269 chr3R 29566379 29566415 chr3R 29566457 29566493 16 78 2.0 3.0 2.5 4.6 114 chr3R 29566379 intergenic not near genes chr3R 29566436 intergenic not near genes chr3R 29566493 intergenic not near genes chr3R_16_29565001 chr3R_29565001 D4-c1 2270 chr3R 29575834 29575848 chr3R 29575918 29575932 6 84 2.0 0.0 1.0 3.0 98 chr3R 29575834 intergenic not near genes chr3R 29575883 intergenic not near genes chr3R 29575932 intergenic not near genes chr3R_6_29575001 chr3R_29575001 D4-c1 2271 chr3R 29590379 29590401 chr3R 29590473 29590495 21 94 4.5 4.5 4.5 3.8 116 chr3R 29590379 intron CG31041 - chr3R 29590437 intron CG31041 - chr3R 29590495 intron CG31041 - chr3R_21_29590001 chr3R_29590001 D4-c1 2272 chr3R 29627288 29627313 chr3R 29627701 29627717 12 411 3.5 5.0 4.2 2.3 429 chr3R 29627288 intergenic not near genes chr3R 29627502 intergenic not near genes chr3R 29627717 intergenic not near genes chr3R_12_29625001 chr3R_29625001 D4-c1 2273 chr3R 29655649 29655670 chr3R 29655729 29655750 8 80 5.5 3.0 4.2 1.5 101 chr3R 29655649 intron Dop1R2 - chr3R 29655700 intron Dop1R2 - chr3R 29655750 intron Dop1R2 - chr3R_8_29655001 chr3R_29655001 D4-c1 2274 chr3R 29669705 29669727 chr3R 29670135 29670157 12 430 9.0 3.5 6.2 1.7 452 chr3R 29669705 exon ppk30 + chr3R 29669931 exon ppk30 + chr3R 29670157 intron ppk30 + chr3R_12_29665001 chr3R_29665001 D4-c1 2275 chr3R 29738272 29738301 chr3R 29739740 29739769 hobo 10 1468 3.0 6.5 4.8 1.7 1497 chr3R 29738272 intergenic CG1969 +,CG7598 + chr3R 29739020 intron CG1969 + chr3R 29739769 5` UTR CG1969 + chr3R_10_29735001 chr3R_29735001 D4-c1 2276 chr3R 29758936 29758970 chr3R 29759015 29759049 28 79 4.0 3.5 3.8 5.8 113 chr3R 29758936 3` UTR CR44953 - chr3R 29758992 3` UTR CR44953 - chr3R 29759049 intergenic CR44953 - chr3R_28_29755001 chr3R_29755001 D4-c1 2277 chr3R 29760361 29760390 chr3R 29761563 29761592 pogo 12 1202 2.5 5.5 4.0 2.4 1231 chr3R 29760361 intergenic not near genes chr3R 29760976 intergenic not near genes chr3R 29761592 intergenic not near genes chr3R_12_29760001 chr3R_29760001 D4-c1 2278 chr3R 29854825 29854856 chr3R 29854906 29854937 12 81 3.5 3.0 3.2 2.9 112 chr3R 29854825 3` UTR dgt1 - chr3R 29854881 exon dgt1 - chr3R 29854937 exon dgt1 - chr3R_12_29850001 chr3R_29850001 D4-c1 2279 chr3R 29882017 29882050 chr3R 29891175 29891208 roo 12 9158 2.0 7.0 4.5 2.2 9191 chr3R 29882017 intron CG31038 + chr3R 29886612 intron CG31038 + chr3R 29891208 intron CG31038 + chr3R_12_29885001 chr3R_29885001 D4-c1 2280 chr3R 29950577 29950599 chr3R 29950655 29950662 10 76 8.0 7.0 7.5 1.2 85 chr3R 29950577 intergenic TkR99D - chr3R 29950620 intergenic TkR99D - chr3R 29950662 intergenic TkR99D - chr3R_10_29950001 chr3R_29950001 D4-c1 2281 chr3R 29966063 29966073 chr3R 29966141 29966151 4 78 4.0 12.5 8.2 0.4 88 chr3R 29966063 intron TkR99D - chr3R 29966107 intron TkR99D - chr3R 29966151 intron TkR99D - chr3R_4_29965001 chr3R_29965001 D4-c1 2282 chr3R 30013382 30013407 chr3R 30013481 30013506 13 99 4.0 5.5 4.8 2.2 124 chr3R 30013382 intron CG7920 - chr3R 30013444 intron CG7920 - chr3R 30013506 intron CG7920 - chr3R_13_30010001 chr3R_30010001 D4-c1 2283 chr3R 30029606 30029617 chr3R 30029712 30029723 9 106 7.0 6.5 6.8 1.2 117 chr3R 30029606 intron Axn + chr3R 30029664 intron Axn + chr3R 30029723 intron Axn + chr3R_9_30025001 chr3R_30025001 D4-c1 2284 chr3R 30084853 30084880 chr3R 30086321 30086348 hobo 14 1468 1.5 4.0 2.8 3.7 1495 chr3R 30084853 intron sima + chr3R 30085600 intron sima + chr3R 30086348 intron sima + chr3R_14_30085001 chr3R_30085001 D4-c1 2285 chr3R 30084882 30084882 chr3R 30086316 30086350 hobo 4 1458 1.5 3.5 2.5 1.1 1468 chr3R 30084882 intron sima + chr3R 30085616 intron sima + chr3R 30086350 intron sima + chr3R_4_30085001 chr3R_30085001 D4-c1 2286 chr3R 30106395 30106413 chr3R 30106504 30106522 10 108 0.0 8.0 4.0 2.0 127 chr3R 30106395 intron sima + chr3R 30106458 intron sima + chr3R 30106522 intron sima + chr3R_10_30105001 chr3R_30105001 D4-c1 2287 chr3R 30124962 30124979 chr3R 30125039 30125056 11 77 4.5 9.0 6.8 1.4 94 chr3R 30124962 intergenic CG45073 - chr3R 30125009 intergenic CG45073 - chr3R 30125056 intergenic CG45073 - chr3R_11_30125001 chr3R_30125001 D4-c1 2288 chr3R 30136950 30136979 chr3R 30137030 30137059 11 80 6.0 5.0 5.5 1.7 109 chr3R 30136950 exon AdoR - chr3R 30137004 intron AdoR - chr3R 30137059 intron AdoR - chr3R_11_30135001 chr3R_30135001 D4-c1 2289 chr3R 30238764 30238796 chr3R 30239929 30239961 1360 9 1165 2.0 0.5 1.2 4.1 1197 chr3R 30238764 intergenic not near genes chr3R 30239362 intergenic not near genes chr3R 30239961 intergenic not near genes chr3R_9_30235001 chr3R_30235001 D4-c1 2290 chr3R 30271061 30271097 chr3R 30271148 30271154 8 75 3.5 4.0 3.8 1.7 93 chr3R 30271061 intergenic not near genes chr3R 30271108 intergenic not near genes chr3R 30271154 intergenic not near genes chr3R_8_30270001 chr3R_30270001 D4-c1 2291 chr3R 30317326 30317359 chr3R 30324919 30324952 roo 10 7593 2.0 5.5 3.8 2.1 7626 chr3R 30317326 intron hdc + chr3R 30321139 intron hdc + chr3R 30324952 intron hdc + chr3R_10_30320001 chr3R_30320001 D4-c1 2292 chr3R 30351421 30351434 chr3R 30351500 30351513 7 79 10.5 4.5 7.5 0.8 92 chr3R 30351421 intron hdc + chr3R 30351467 intron hdc + chr3R 30351513 intron hdc + chr3R_7_30350001 chr3R_30350001 D4-c1 2293 chr3R 30396215 30396245 chr3R 30404482 30404512 roo 8 8267 4.0 6.5 5.2 1.3 8297 chr3R 30396215 intergenic not near genes chr3R 30400364 intergenic not near genes chr3R 30404512 5` UTR CR45570 + chr3R_8_30400001 chr3R_30400001 D4-c1 2294 chr3R 30456393 30456424 chr3R 30456474 30456505 13 81 2.5 2.0 2.2 4.1 112 chr3R 30456393 intergenic CG2224 - chr3R 30456449 3` UTR CG2224 - chr3R 30456505 3` UTR CG2224 - chr3R_13_30455001 chr3R_30455001 D4-c1 2295 chr3R 30458009 30458048 chr3R 30458090 30458129 15 81 4.5 4.5 4.5 2.7 120 chr3R 30458009 intron CG2224 - chr3R 30458069 intron CG2224 - chr3R 30458129 intron CG2224 - chr3R_15_30455001 chr3R_30455001 D4-c1 2296 chr3R 30480471 30480512 chr3R 30482940 30482981 jockey 22 2468 3.0 4.0 3.5 4.9 2510 chr3R 30480471 intron PH4alphaEFB + chr3R 30481726 intron PH4alphaEFB + chr3R 30482981 intron PH4alphaEFB + chr3R_22_30480001 chr3R_30480001 D4-c1 2297 chr3R 30498405 30498434 chr3R 30498606 30498635 11 201 0.0 5.5 2.8 2.9 230 chr3R 30498405 intron PH4alphaNE1 - chr3R 30498520 intron PH4alphaNE1 - chr3R 30498635 intron PH4alphaNE1 - chr3R_11_30495001 chr3R_30495001 D4-c1 2298 chr3R 30544738 30544762 chr3R 30544820 30544855 12 89 3.0 4.0 3.5 2.7 117 chr3R 30544738 intron tmod + chr3R 30544796 intron tmod + chr3R 30544855 intron tmod + chr3R_12_30540001 chr3R_30540001 D4-c1 2299 chr3R 30571700 30571714 chr3R 30571781 30571795 4 81 2.0 4.5 3.2 1.0 95 chr3R 30571700 intron tmod + chr3R 30571748 intron tmod + chr3R 30571795 intron tmod + chr3R_4_30570001 chr3R_30570001 D4-c1 2300 chr3R 30591314 30591339 chr3R 30591402 30591427 9 88 0.0 5.0 2.5 2.6 113 chr3R 30591314 intergenic not near genes chr3R 30591370 intergenic not near genes chr3R 30591427 intergenic not near genes chr3R_9_30590001 chr3R_30590001 D4-c1 2301 chr3R 30627601 30627636 chr3R 30627682 30627716 19 80 7.0 8.0 7.5 2.2 115 chr3R 30627601 3` UTR CG2267 - chr3R 30627658 exon CG2267 - chr3R 30627716 exon CG2267 - chr3R_19_30625001 chr3R_30625001 D4-c1 2302 chr3R 30679538 30679551 chr3R 30686986 30687021 blood 6 7466 3.5 4.5 4.0 1.2 7483 chr3R 30679538 intergenic not near genes chr3R 30683280 intergenic not near genes chr3R 30687021 intergenic not near genes chr3R_6_30680001 chr3R_30680001 D4-c1 2303 chr3R 30755622 30755654 chr3R 30755708 30755740 18 86 6.5 4.5 5.5 2.8 118 chr3R 30755622 intergenic not near genes chr3R 30755681 intergenic not near genes chr3R 30755740 intergenic not near genes chr3R_18_30755001 chr3R_30755001 D4-c1 2304 chr3R 30818808 30818846 chr3R 30820374 30820412 1360 15 1566 7.5 5.5 6.5 2.0 1604 chr3R 30818808 intron cindr + chr3R 30819610 intron cindr + chr3R 30820412 intron cindr + chr3R_15_30815001 chr3R_30815001 D4-c1 2305 chr3R 30842832 30842864 chr3R 30842924 30842956 17 92 7.5 12.0 9.8 1.6 124 chr3R 30842832 intergenic not near genes chr3R 30842894 intergenic not near genes chr3R 30842956 intergenic not near genes chr3R_17_30840001 chr3R_30840001 D4-c1 2306 chr3R 31137157 31137183 chr3R 31137238 31137264 9 81 2.5 5.0 3.8 1.9 107 chr3R 31137157 intron Gycbeta100B + chr3R 31137210 intron Gycbeta100B + chr3R 31137264 intron Gycbeta100B + chr3R_9_31135001 chr3R_31135001 D4-c1 2307 chr3R 31279370 31279409 chr3R 31285562 31285588 diver 17 6191 4.5 7.5 6.0 2.4 6218 chr3R 31279370 intergenic not near genes chr3R 31282479 intergenic not near genes chr3R 31285588 intergenic not near genes chr3R_17_31280001 chr3R_31280001 D4-c1 2308 chr3R 31323312 31323351 chr3R 31323521 31323560 26 208 3.5 5.5 4.5 4.7 248 chr3R 31323312 intron CG34347 + chr3R 31323436 intron CG34347 + chr3R 31323560 intron CG34347 + chr3R_26_31320001 chr3R_31320001 D4-c1 2309 chr3R 31413088 31413123 chr3R 31418289 31418324 copia 14 5200 2.5 0.0 1.2 6.4 5236 chr3R 31413088 intron Gprk2 + chr3R 31415706 intron Gprk2 + chr3R 31418324 intron Gprk2 + chr3R_14_31415001 chr3R_31415001 D4-c1 2310 chr3R 31426881 31426913 chr3R 31426974 31427006 12 92 5.0 4.0 4.5 2.2 125 chr3R 31426881 intron Gprk2 + chr3R 31426944 intron Gprk2 + chr3R 31427006 intron Gprk2 + chr3R_12_31425001 chr3R_31425001 D4-c1 2311 chr3R 31435361 31435391 chr3R 31435514 31435544 14 153 8.0 7.0 7.5 1.6 183 chr3R 31435361 intron Gprk2 + chr3R 31435452 intron Gprk2 + chr3R 31435544 intron Gprk2 + chr3R_14_31435001 chr3R_31435001 D4-c1 2312 chr3R 31549415 31549451 chr3R 31549617 31549653 13 199 4.0 3.5 3.8 2.7 238 chr3R 31549415 intron nyo + chr3R 31549534 intron nyo + chr3R 31549653 intron nyo + chr3R_13_31545001 chr3R_31545001 D4-c1 2313 chr3R 31691529 31691563 chr3R 31696296 31696330 Doc 18 4767 7.5 4.5 6.0 2.6 4801 chr3R 31691529 intergenic not near genes chr3R 31693930 intergenic not near genes chr3R 31696330 intergenic not near genes chr3R_18_31690001 chr3R_31690001 D4-c1 2314 chr3R 31774871 31774896 chr3R 31775016 31775042 11 146 5.0 2.5 3.8 2.3 171 chr3R 31774871 3` UTR sip3 + chr3R 31774956 3` UTR sip3 + chr3R 31775042 3` UTR sip3 + chr3R_11_31770001 chr3R_31770001 D4-c1 2315 chr3R 31808613 31808641 chr3R 31808690 31808718 8 77 5.5 2.0 3.8 1.7 105 chr3R 31808613 intron CG11576 - chr3R 31808666 intron CG11576 - chr3R 31808718 intron CG11576 - chr3R_8_31805001 chr3R_31805001 D4-c1 2316 chr3R 31841777 31841809 chr3R 31841882 31841914 15 105 8.0 8.0 8.0 1.7 137 chr3R 31841777 3` UTR RhoGAP100F + chr3R 31841846 3` UTR RhoGAP100F + chr3R 31841914 3` UTR RhoGAP100F + chr3R_15_31840001 chr3R_31840001 D4-c1 2317 chr3R 31858196 31858204 chr3R 31858300 31858308 4 104 0.0 11.0 5.5 0.6 112 chr3R 31858196 intron heph - chr3R 31858252 intron heph - chr3R 31858308 intron heph - chr3R_4_31855001 chr3R_31855001 D4-c1 2318 chr3R 31924599 31924606 chr3R 31924681 31924688 4 82 0.0 15.0 7.5 0.5 89 chr3R 31924599 intron heph - chr3R 31924644 intron heph - chr3R 31924688 intron heph - chr3R_4_31920001 chr3R_31920001 D4-c1 2319 chr3R 31926380 31926394 chr3R 31926460 31926474 7 80 6.0 6.0 6.0 1.0 94 chr3R 31926380 intron heph - chr3R 31926427 intron heph - chr3R 31926474 intron heph - chr3R_7_31925001 chr3R_31925001 D4-c1 2320 chr3R 31930898 31931194 chr3R 31931007 31931278 4 104 4.5 8.5 6.5 0.5 380 chr3R 31930898 intron heph - chr3R 31931088 intron heph - chr3R 31931278 intron heph - chr3R_4_31930001 chr3R_31930001 D4-c1 2321 chr3R 31931198 31931215 chr3R 31931282 31931299 8 84 2.5 8.5 5.5 1.2 101 chr3R 31931198 intron heph - chr3R 31931248 intron heph - chr3R 31931299 intron heph - chr3R_8_31930001 chr3R_31930001 D4-c1 2322 chr3R 31997994 31998024 chr3R 32005465 32005495 blood 15 7471 4.5 7.5 6.0 2.1 7501 chr3R 31997994 intron heph - chr3R 32001744 intron heph - chr3R 32005495 intron heph - chr3R_15_32000001 chr3R_32000001 D4-c1 2323 chr3R 32009983 32010016 chr3R 32010109 32010142 19 126 2.5 2.5 2.5 5.4 159 chr3R 32009983 intron heph - chr3R 32010062 intron heph - chr3R 32010142 intron heph - chr3R_19_32010001 chr3R_32010001 D4-c1 2324 chr4 76492 76517 chr4 81936 81961 I-element 9 5444 7.5 3.0 5.2 1.5 5469 chr4 76492 intron pan + chr4 79226 intron pan + chr4 81961 intron pan + chr4_9_75001 chr4_75001 D4-c1 2325 chr4 319996 320021 chr4 328173 328197 Stalker2 6 8177 5.0 4.5 4.8 1.0 8201 chr4 319996 3` UTR CG32850 + chr4 324096 intron CG32850 + chr4 328197 3` UTR,3` UTR CG32850 +,PMCA - chr4_6_320001 chr4_320001 D4-c1 2326 chr4 671602 671635 chr4 680186 680219 Tirant 24 8582 4.5 7.0 5.8 3.5 8617 chr4 671602 intron CG11360 + chr4 675910 intron CG11360 + chr4 680219 intron CG11360 + chr4_24_675001 chr4_675001 D4-c1 2327 chr4 959621 959654 chr4 959801 959834 16 180 3.0 1.5 2.2 5.0 213 chr4 959621 intergenic CR44030 +,CR45201 - chr4 959728 5` UTR CR44030 + chr4 959834 5` UTR CR44030 + chr4_16_955001 chr4_955001 D4-c1 2328 chr4 972500 972526 chr4 972573 972609 5 81 1.5 4.0 2.8 1.3 109 chr4 972500 intron fuss - chr4 972554 intron fuss - chr4 972609 intron fuss - chr4_5_970001 chr4_970001 D4-c1 2329 chrX 428425 428452 chrX 434611 434638 3S18 12 6185 4.0 2.5 3.2 2.9 6213 chrX 428425 intron CG32816 - chrX 431532 intron CG32816 - chrX 434638 intron CG32816 - chrX_12_430001 chrX_430001 D4-c1 2330 chrX 827615 827625 chrX 835408 835418 roo 4 7793 3.0 2.5 2.8 1.1 7803 chrX 827615 intron CG43867 - chrX 831516 intron CG43867 - chrX 835418 intron CG43867 - chrX_4_830001 chrX_830001 D4-c1 2331 chrX 906700 906732 chrX 908490 908522 S-element 14 1790 4.0 11.5 7.8 1.6 1822 chrX 906700 intron CG43867 - chrX 907611 intron CG43867 - chrX 908522 intron CG43867 - chrX_14_905001 chrX_905001 D4-c1 2332 chrX 1627972 1627998 chrX 1635441 1635467 gtwin 9 7468 2.5 3.0 2.8 2.4 7495 chrX 1627972 intron,intron Mur2B -,br + chrX 1631720 intron,intron Mur2B -,br + chrX 1635467 intron,intron Mur2B -,br + chrX_9_1630001 chrX_1630001 D4-c1 2333 chrX 2399836 2399869 chrX 2408190 2408223 roo 14 8354 6.0 4.5 5.2 2.3 8387 chrX 2399836 intergenic not near genes chrX 2404030 intergenic not near genes chrX 2408223 intergenic not near genes chrX_14_2400001 chrX_2400001 D4-c1 2334 chrX 2578810 2578841 chrX 2578903 2578934 15 93 4.5 3.5 4.0 3.0 124 chrX 2578810 intergenic Pdfr +,Vha36-3 - chrX 2578872 intergenic Vha36-3 -,Pdfr + chrX 2578934 intergenic Vha36-3 -,Pdfr + chrX_15_2575001 chrX_2575001 D4-c1 2335 chrX 2664388 2664412 chrX 2665535 2665559 1360 8 1147 2.5 6.0 4.2 1.5 1171 chrX 2664388 intron sgg + chrX 2664974 intron sgg + chrX 2665559 intron sgg + chrX_8_2660001 chrX_2660001 D4-c1 2336 chrX 2844899 2844932 chrX 2852310 2852343 mdg1 6 7411 3.0 2.5 2.8 1.6 7444 chrX 2844899 intron kirre + chrX 2848621 intron kirre + chrX 2852343 intron kirre + chrX_6_2845001 chrX_2845001 D4-c1 2337 chrX 2888110 2888147 chrX 2888189 2888226 10 78 2.5 1.5 2.0 3.3 116 chrX 2888110 intron kirre + chrX 2888168 intron kirre + chrX 2888226 intron kirre + chrX_10_2885001 chrX_2885001 D4-c1 2338 chrX 3031154 3031181 chrX 3031236 3031265 6 83 2.0 0.0 1.0 3.0 111 chrX 3031154 intron kirre + chrX 3031210 intron kirre + chrX 3031265 intron kirre + chrX_6_3030001 chrX_3030001 D4-c1 2339 chrX 3058023 3058050 chrX 3058265 3058292 pogo 5 242 1.5 1.0 1.2 2.3 269 chrX 3058023 intron kirre + chrX 3058158 intron kirre + chrX 3058292 intron kirre + chrX_5_3055001 chrX_3055001 D4-c1 2340 chrX 3206487 3206495 chrX 3206567 3206575 6 80 0.0 2.5 1.2 2.7 88 chrX 3206487 intron dnc + chrX 3206531 intron dnc + chrX 3206575 intron dnc + chrX_6_3205001 chrX_3205001 D4-c1 2341 chrX 3243626 3243656 chrX 3243717 3243747 6 91 0.5 1.5 1.0 3.0 121 chrX 3243626 intron dnc + chrX 3243686 intron dnc + chrX 3243747 intron dnc + chrX_6_3240001 chrX_3240001 D4-c1 2342 chrX 3264362 3264379 chrX 3264491 3264508 6 129 2.5 2.5 2.5 1.7 146 chrX 3264362 intron dnc + chrX 3264435 intron dnc + chrX 3264508 intron dnc + chrX_6_3260001 chrX_3260001 D4-c1 2343 chrX 3306346 3306353 chrX 3306429 3306435 4 83 3.5 0.0 1.8 1.4 89 chrX 3306346 intron dnc + chrX 3306390 intron dnc + chrX 3306435 intron dnc + chrX_4_3305001 chrX_3305001 D4-c1 2344 chrX 3328277 3328295 chrX 3328856 3328874 4 579 0.5 3.5 2.0 1.3 597 chrX 3328277 intron,intron dnc +,CR44886 - chrX 3328576 intron,intron dnc +,CR44886 - chrX 3328874 intron,intron dnc +,CR44886 - chrX_4_3325001 chrX_3325001 D4-c1 2345 chrX 3459985 3460013 chrX 3460062 3460091 8 78 2.5 2.0 2.2 2.5 106 chrX 3459985 intron,intron CR44999 +,CG16782 - chrX 3460038 intron,5` UTR CR44999 +,CG16782 - chrX 3460091 intron,5` UTR CR44999 +,CG16782 - chrX_8_3460001 chrX_3460001 D4-c1 2346 chrX 3481737 3481774 chrX 3481814 3481851 11 77 2.5 1.0 1.8 3.9 114 chrX 3481737 intron,intron CR44999 +,CG10804 - chrX 3481794 intron,intron CR44999 +,CG10804 - chrX 3481851 intron,intron CR44999 +,CG10804 - chrX_11_3480001 chrX_3480001 D4-c1 2347 chrX 3513757 3513781 chrX 3513841 3513865 6 84 4.0 2.5 3.2 1.4 108 chrX 3513757 intron,intron CR44999 +,CG32791 - chrX 3513811 intron,intron CR44999 +,CG32791 - chrX 3513865 intron,intron CR44999 +,CG32791 - chrX_6_3510001 chrX_3510001 D4-c1 2348 chrX 3535409 3535429 chrX 3535501 3535521 6 90 2.5 3.0 2.8 1.6 112 chrX 3535409 intron CG32791 - chrX 3535465 intron CG32791 - chrX 3535521 intron CG32791 - chrX_6_3535001 chrX_3535001 D4-c1 2349 chrX 3597549 3597582 chrX 3619718 3619751 roo 7 22169 2.5 2.0 2.2 2.2 22202 chrX 3597549 intron AstA-R1 + chrX 3608650 intron AstA-R1 + chrX 3619751 intron AstA-R1 + chrX_7_3605001 chrX_3605001 D4-c1 2350 chrX 3657419 3657446 chrX 3657500 3657527 10 81 0.5 4.0 2.2 3.1 108 chrX 3657419 intron AstA-R1 + chrX 3657473 intron AstA-R1 + chrX 3657527 intron AstA-R1 + chrX_10_3655001 chrX_3655001 D4-c1 2351 chrX 3713100 3713137 chrX 3713209 3713247 7 110 2.5 2.0 2.2 2.2 147 chrX 3713100 intron Rala - chrX 3713174 intron Rala - chrX 3713247 intron Rala - chrX_7_3710001 chrX_3710001 D4-c1 2352 chrX 3726760 3726796 chrX 3730158 3730194 NOF 9 3398 3.0 0.0 1.5 3.6 3434 chrX 3726760 intron tlk + chrX 3728477 intron tlk + chrX 3730194 intron tlk + chrX_9_3725001 chrX_3725001 D4-c1 2353 chrX 3817097 3817108 chrX 3817184 3817195 7 87 0.5 5.0 2.8 1.8 98 chrX 3817097 intron ec + chrX 3817146 intron ec + chrX 3817195 intron ec + chrX_7_3815001 chrX_3815001 D4-c1 2354 chrX 3866109 3866137 chrX 3866188 3866216 4 79 0.0 0.0 0.0 4.0 107 chrX 3866109 intron yin - chrX 3866162 intron yin - chrX 3866216 intron yin - chrX_4_3865001 chrX_3865001 D4-c1 2355 chrX 3874745 3874775 chrX 3874827 3874857 7 82 3.5 2.0 2.8 1.8 112 chrX 3874745 intron CG2930 + chrX 3874801 intron CG2930 + chrX 3874857 intron CG2930 + chrX_7_3870001 chrX_3870001 D4-c1 2356 chrX 3881268 3881305 chrX 3881408 3881445 10 140 2.5 3.5 3.0 2.5 177 chrX 3881268 intron VhaAC39-1 + chrX 3881356 intron VhaAC39-1 + chrX 3881445 intron VhaAC39-1 + chrX_10_3880001 chrX_3880001 D4-c1 2357 chrX 3986861 3986893 chrX 3994495 3994527 412 9 7634 6.0 3.0 4.5 1.6 7666 chrX 3986861 intergenic not near genes chrX 3990694 intergenic not near genes chrX 3994527 intergenic not near genes chrX_9_3990001 chrX_3990001 D4-c1 2358 chrX 3999292 3999319 chrX 3999375 3999401 6 83 3.5 5.5 4.5 1.1 109 chrX 3999292 intergenic not near genes chrX 3999346 intergenic not near genes chrX 3999401 intergenic not near genes chrX_6_3995001 chrX_3995001 D4-c1 2359 chrX 4101886 4101900 chrX 4101967 4101981 4 81 0.0 4.0 2.0 1.3 95 chrX 4101886 exon CG15375 + chrX 4101934 exon CG15375 + chrX 4101981 exon CG15375 + chrX_4_4100001 chrX_4100001 D4-c1 2360 chrX 4132401 4132423 chrX 4132479 4132501 4 78 2.0 1.5 1.8 1.4 100 chrX 4132401 3` UTR GlcAT-I + chrX 4132451 3` UTR GlcAT-I + chrX 4132501 3` UTR GlcAT-I + chrX_4_4130001 chrX_4130001 D4-c1 2361 chrX 4185692 4185719 chrX 4185778 4185805 6 86 3.0 4.0 3.5 1.3 113 chrX 4185692 intron Fas2 - chrX 4185748 intron Fas2 - chrX 4185805 intron Fas2 - chrX_6_4185001 chrX_4185001 D4-c1 2362 chrX 4262754 4262783 chrX 4262854 4262883 13 100 3.5 4.5 4.0 2.6 129 chrX 4262754 intergenic not near genes chrX 4262818 intergenic not near genes chrX 4262883 intergenic not near genes chrX_13_4260001 chrX_4260001 D4-c1 2363 chrX 4267314 4267339 chrX 4267395 4267420 9 81 8.0 5.0 6.5 1.2 106 chrX 4267314 intergenic not near genes chrX 4267367 intergenic not near genes chrX 4267420 intergenic not near genes chrX_9_4265001 chrX_4265001 D4-c1 2364 chrX 4276476 4276509 chrX 4276556 4276589 8 80 3.5 0.5 2.0 2.7 113 chrX 4276476 intergenic CG15577 - chrX 4276532 3` UTR CG15577 - chrX 4276589 3` UTR CG15577 - chrX_8_4275001 chrX_4275001 D4-c1 2365 chrX 4343885 4343893 chrX 4344000 4344008 4 115 1.0 0.5 0.8 2.2 123 chrX 4343885 intron norpA + chrX 4343946 intron norpA + chrX 4344008 intron norpA + chrX_4_4340001 chrX_4340001 D4-c1 2366 chrX 4361430 4361454 chrX 4361508 4361532 5 78 2.0 1.0 1.5 2.0 102 chrX 4361430 intron norpA + chrX 4361481 intron norpA + chrX 4361532 intron norpA + chrX_5_4360001 chrX_4360001 D4-c1 2367 chrX 4396994 4397010 chrX 4397080 4397096 5 86 1.5 6.5 4.0 1.0 102 chrX 4396994 intron CR32773 - chrX 4397045 intron CR32773 - chrX 4397096 intron CR32773 - chrX_5_4395001 chrX_4395001 D4-c1 2368 chrX 4792377 4792393 chrX 4792811 4792827 jockey 6 434 8.0 4.0 6.0 0.9 450 chrX 4792377 intergenic not near genes chrX 4792602 intergenic not near genes chrX 4792827 intergenic not near genes chrX_6_4790001 chrX_4790001 D4-c1 2369 chrX 4827966 4828000 chrX 4835338 4835372 Stalker4 9 7367 5.0 2.5 3.8 1.9 7406 chrX 4827966 intergenic not near genes chrX 4831669 intergenic not near genes chrX 4835372 intergenic not near genes chrX_9_4830001 chrX_4830001 D4-c1 2370 chrX 4835636 4835651 chrX 4835801 4835816 4 165 0.0 3.0 1.5 1.6 180 chrX 4835636 intergenic not near genes chrX 4835726 intergenic not near genes chrX 4835816 intergenic not near genes chrX_4_4835001 chrX_4835001 D4-c1 2371 chrX 4946578 4946602 chrX 4946658 4946682 6 80 4.5 2.0 3.2 1.4 104 chrX 4946578 intron Ptp4E + chrX 4946630 intron Ptp4E + chrX 4946682 intron Ptp4E + chrX_6_4945001 chrX_4945001 D4-c1 2372 chrX 4961839 4961872 chrX 4962042 4962075 7 203 1.0 1.5 1.2 3.2 236 chrX 4961839 intron CR44833 - chrX 4961957 intron CR44833 - chrX 4962075 intron CR44833 - chrX_7_4960001 chrX_4960001 D4-c1 2373 chrX 5049579 5049607 chrX 5049668 5049696 6 89 1.5 1.0 1.2 2.7 117 chrX 5049579 intron,intron CR44833 -,ovo + chrX 5049638 intron,intron CR44833 -,ovo + chrX 5049696 intron,intron CR44833 -,ovo + chrX_6_5045001 chrX_5045001 D4-c1 2374 chrX 5096273 5096304 chrX 5103839 5103870 springer 8 7566 3.0 6.0 4.5 1.5 7597 chrX 5096273 intron,intron CG15465 +,rg + chrX 5100072 intron,intron CG15465 +,rg + chrX 5103870 intron,intron CG15465 +,rg + chrX_8_5100001 chrX_5100001 D4-c1 2375 chrX 5220390 5220415 chrX 5220632 5220657 7 242 0.5 4.0 2.2 2.2 267 chrX 5220390 intron,intron CG15465 +,rg + chrX 5220524 intron,intron CG15465 +,rg + chrX 5220657 intron,intron CG15465 +,rg + chrX_7_5220001 chrX_5220001 D4-c1 2376 chrX 5338709 5338719 chrX 5339963 5339973 jockey 4 1254 4.0 5.0 4.5 0.7 1264 chrX 5338709 intergenic not near genes chrX 5339341 intergenic not near genes chrX 5339973 intergenic SK + chrX_4_5335001 chrX_5335001 D4-c1 2377 chrX 5345445 5345468 chrX 5345558 5345581 7 113 1.0 2.0 1.5 2.8 136 chrX 5345445 intron SK + chrX 5345513 intron SK + chrX 5345581 intron SK + chrX_7_5345001 chrX_5345001 D4-c1 2378 chrX 5473592 5473618 chrX 5473666 5473695 5 76 2.5 5.0 3.8 1.0 103 chrX 5473592 intron SPR + chrX 5473644 intron SPR + chrX 5473695 intron SPR + chrX_5_5470001 chrX_5470001 D4-c1 2379 chrX 5481066 5481082 chrX 5485035 5485051 I-element 5 3969 3.5 4.0 3.8 1.0 3985 chrX 5481066 intron SPR + chrX 5483058 intron SPR + chrX 5485051 intron SPR + chrX_5_5480001 chrX_5480001 D4-c1 2380 chrX 5509101 5509128 chrX 5509194 5509218 9 93 2.5 4.0 3.2 2.1 117 chrX 5509101 intergenic not near genes chrX 5509160 intergenic not near genes chrX 5509218 intergenic not near genes chrX_9_5505001 chrX_5505001 D4-c1 2381 chrX 5566772 5566781 chrX 5566854 5566863 4 82 3.0 6.0 4.5 0.7 91 chrX 5566772 intergenic not near genes chrX 5566818 intergenic not near genes chrX 5566863 intergenic not near genes chrX_4_5565001 chrX_5565001 D4-c1 2382 chrX 5716046 5716068 chrX 5744259 5744281 Doc 6 28213 22.5 16.0 19.2 0.3 28235 chrX 5716046 intron CG33080 - chrX 5730164 intron CG32758 - chrX 5744281 intron IntS6 - chrX_6_5730001 chrX_5730001 D4-c1 2383 chrX 6335215 6335236 chrX 6337726 6337747 Tirant 5 2511 0.5 1.5 1.0 2.5 2532 chrX 6335215 intergenic not near genes chrX 6336481 intergenic not near genes chrX 6337747 intergenic CG3842 + chrX_5_6335001 chrX_6335001 D4-c1 2384 chrX 6388667 6388685 chrX 6388744 6388762 6 77 2.0 1.0 1.5 2.4 95 chrX 6388667 intergenic not near genes chrX 6388714 intergenic not near genes chrX 6388762 intergenic not near genes chrX_6_6385001 chrX_6385001 D4-c1 2385 chrX 6425005 6425013 chrX 6425561 6425569 4 556 24.5 33.0 28.8 0.1 564 chrX 6425005 intron CG42340 - chrX 6425287 intron CG42340 - chrX 6425569 intron CG42340 - chrX_4_6425001 chrX_6425001 D4-c1 2386 chrX 6425003 6425031 chrX 6425571 6425587 8 558 25.0 31.0 28.0 0.3 584 chrX 6425003 intron CG42340 - chrX 6425295 intron CG42340 - chrX 6425587 intron CG42340 - chrX_8_6425001 chrX_6425001 D4-c1 2387 chrX 6457439 6457445 chrX 6457521 6457527 6 82 4.5 3.5 4.0 1.2 88 chrX 6457439 intron CG42340 - chrX 6457483 intron CG42340 - chrX 6457527 intron CG42340 - chrX_6_6455001 chrX_6455001 D4-c1 2388 chrX 6562819 6562847 chrX 6571302 6571330 Tirant 8 8483 4.5 3.5 4.0 1.6 8511 chrX 6562819 intron CG34417 + chrX 6567074 intron CG34417 + chrX 6571330 intron CG34417 + chrX_8_6565001 chrX_6565001 D4-c1 2389 chrX 6592061 6592084 chrX 6592258 6592281 4 197 2.5 2.0 2.2 1.2 220 chrX 6592061 intron Pat1 + chrX 6592171 intron Pat1 + chrX 6592281 intron Pat1 + chrX_4_6590001 chrX_6590001 D4-c1 2390 chrX 6605477 6605502 chrX 6608500 6608525 Burdock 5 3023 2.0 1.0 1.5 2.0 3048 chrX 6605477 intron pigs + chrX 6607001 intron pigs + chrX 6608525 intron pigs + chrX_5_6605001 chrX_6605001 D4-c1 2391 chrX 6859562 6859575 chrX 6859976 6859989 4 414 0.5 0.5 0.5 2.7 427 chrX 6859562 intron CG14434 - chrX 6859776 intron CG14434 - chrX 6859989 intron CG14434 - chrX_4_6855001 chrX_6855001 D4-c1 2392 chrX 6897579 6897709 chrX 6897658 6897820 6 95 1.5 1.5 1.5 2.4 241 chrX 6897579 intergenic not near genes chrX 6897700 intergenic not near genes chrX 6897820 intergenic not near genes chrX_6_6895001 chrX_6895001 D4-c1 2393 chrX 6984626 6984632 chrX 6984704 6984710 6 78 2.5 1.0 1.8 2.1 84 chrX 6984626 intron ogre - chrX 6984668 intron ogre - chrX 6984710 intron ogre - chrX_6_6980001 chrX_6980001 D4-c1 2394 chrX 6989502 6989528 chrX 6989590 6989616 9 88 2.0 5.5 3.8 1.9 114 chrX 6989502 intron ogre - chrX 6989559 intron ogre - chrX 6989616 intron ogre - chrX_9_6985001 chrX_6985001 D4-c1 2395 chrX 7125245 7125274 chrX 7134405 7134434 roo 5 9160 1.5 1.0 1.2 2.3 9189 chrX 7125245 intergenic not near genes chrX 7129840 intergenic not near genes chrX 7134434 intergenic not near genes chrX_5_7125001 chrX_7125001 D4-c1 2396 chrX 7294514 7294542 chrX 7294613 7294641 7 99 1.0 3.5 2.2 2.2 127 chrX 7294514 intron,intron CR44357 -,CG1677 - chrX 7294578 intron,intron CR44357 -,CG1677 - chrX 7294641 intron,intron CR44357 -,CG1677 - chrX_7_7290001 chrX_7290001 D4-c1 2397 chrX 7399218 7399239 chrX 7399306 7399327 6 88 0.5 3.0 1.8 2.1 109 chrX 7399218 intron,intron CR44357 -,CG1677 - chrX 7399272 intron,intron CR44357 -,CG1677 - chrX 7399327 intron,intron CR44357 -,CG1677 - chrX_6_7395001 chrX_7395001 D4-c1 2398 chrX 7707244 7707265 chrX 7707475 7707496 9 231 2.5 3.5 3.0 2.2 252 chrX 7707244 intron CHES-1-like - chrX 7707370 intron CHES-1-like - chrX 7707496 intron CHES-1-like - chrX_9_7705001 chrX_7705001 D4-c1 2399 chrX 7739719 7739746 chrX 7739816 7739843 6 97 0.5 2.0 1.2 2.7 124 chrX 7739719 3` UTR Tom40 + chrX 7739781 3` UTR Tom40 + chrX 7739843 3` UTR Tom40 + chrX_6_7735001 chrX_7735001 D4-c1 2400 chrX 8015220 8015238 chrX 8015302 8015325 5 86 2.0 1.0 1.5 2.0 105 chrX 8015220 intron Tbh + chrX 8015272 intron Tbh + chrX 8015325 intron Tbh + chrX_5_8015001 chrX_8015001 D4-c1 2401 chrX 8031426 8031461 chrX 8035736 8035771 Juan 8 4310 5.0 3.0 4.0 1.6 4345 chrX 8031426 intergenic not near genes chrX 8033598 intergenic not near genes chrX 8035771 3` UTR CG2233 - chrX_8_8030001 chrX_8030001 D4-c1 2402 chrX 8364850 8364880 chrX 8365248 8365295 BS 4 406 2.5 0.0 1.2 1.8 445 chrX 8364850 intron nAChRalpha3 - chrX 8365072 intron nAChRalpha3 - chrX 8365295 intron nAChRalpha3 - chrX_4_8365001 chrX_8365001 D4-c1 2403 chrX 8371155 8371161 chrX 8371318 8371324 5 163 8.0 0.0 4.0 1.0 169 chrX 8371155 intergenic not near genes chrX 8371240 intergenic not near genes chrX 8371324 intergenic not near genes chrX_5_8370001 chrX_8370001 D4-c1 2404 chrX 8421461 8421493 chrX 8421554 8421586 8 91 2.5 2.5 2.5 2.3 125 chrX 8421461 intron Trf2 + chrX 8421524 intron Trf2 + chrX 8421586 intron Trf2 + chrX_8_8420001 chrX_8420001 D4-c1 2405 chrX 8621990 8622006 chrX 8622081 8622097 4 91 2.0 1.0 1.5 1.6 107 chrX 8621990 intergenic not near genes chrX 8622044 intergenic not near genes chrX 8622097 intergenic not near genes chrX_4_8620001 chrX_8620001 D4-c1 2406 chrX 8922327 8922349 chrX 8922762 8922784 jockey 6 431 6.0 4.5 5.2 1.0 457 chrX 8922327 intron rdgA + chrX 8922556 intron rdgA + chrX 8922784 intron rdgA + chrX_6_8920001 chrX_8920001 D4-c1 2407 chrX 8927579 8927608 chrX 8929850 8929879 NOF 6 2268 6.0 2.0 4.0 1.2 2300 chrX 8927579 intron rdgA + chrX 8928729 intron rdgA + chrX 8929879 intron rdgA + chrX_6_8925001 chrX_8925001 D4-c1 2408 chrX 8948771 8948792 chrX 8956282 8956303 roo 5 7511 1.5 5.0 3.2 1.2 7532 chrX 8948771 intron rdgA + chrX 8952537 intron rdgA + chrX 8956303 intron rdgA + chrX_5_8950001 chrX_8950001 D4-c1 2409 chrX 8959276 8959293 chrX 8959353 8959370 4 77 1.0 2.5 1.8 1.4 94 chrX 8959276 intron rdgA + chrX 8959323 intron rdgA + chrX 8959370 intron rdgA + chrX_4_8955001 chrX_8955001 D4-c1 2410 chrX 8971888 8971919 chrX 8971968 8971998 9 80 1.0 1.5 1.2 4.1 110 chrX 8971888 intron rdgA + chrX 8971943 intron rdgA + chrX 8971998 intron rdgA + chrX_9_8970001 chrX_8970001 D4-c1 2411 chrX 9229907 9229930 chrX 9229988 9230011 8 81 2.5 2.5 2.5 2.3 104 chrX 9229907 intron CG12121 - chrX 9229959 intron CG12121 - chrX 9230011 intron CG12121 - chrX_8_9225001 chrX_9225001 D4-c1 2412 chrX 9273022 9273045 chrX 9273104 9273127 7 82 2.0 0.5 1.2 3.2 105 chrX 9273022 intergenic Cfp1 -,CG16892 + chrX 9273074 intergenic Cfp1 -,CG16892 + chrX 9273127 intergenic Cfp1 -,CG16892 + chrX_7_9270001 chrX_9270001 D4-c1 2413 chrX 9337943 9337972 chrX 9338036 9338065 12 93 3.0 3.0 3.0 3.0 122 chrX 9337943 intron CG34449 - chrX 9338004 intron CG34449 - chrX 9338065 exon CG34449 - chrX_12_9335001 chrX_9335001 D4-c1 2414 chrX 9457834 9457849 chrX 9457912 9457927 5 78 2.0 3.5 2.8 1.3 93 chrX 9457834 intron mgl - chrX 9457880 intron mgl - chrX 9457927 intron mgl - chrX_5_9455001 chrX_9455001 D4-c1 2415 chrX 9508131 9508167 chrX 9509650 9509686 jockey 10 1518 2.0 2.5 2.2 3.1 1555 chrX 9508131 intron CG32700 - chrX 9508908 intron CG32700 - chrX 9509686 intron CG32700 - chrX_10_9505001 chrX_9505001 D4-c1 2416 chrX 9575788 9575824 chrX 9576113 9576149 mdg3 14 324 4.5 7.5 6.0 2.0 361 chrX 9575788 intron,exon CG32699 -,CG42395 - chrX 9575968 intron,intron CG32699 -,CG42395 - chrX 9576149 intron,5` UTR CG32699 -,CG42395 - chrX_14_9575001 chrX_9575001 D4-c1 2417 chrX 9635101 9635127 chrX 9635203 9635229 10 102 3.5 3.5 3.5 2.2 128 chrX 9635101 intron l(1)G0232 - chrX 9635165 intron l(1)G0232 - chrX 9635229 intron l(1)G0232 - chrX_10_9635001 chrX_9635001 D4-c1 2418 chrX 9784167 9784204 chrX 9784356 9784393 17 187 2.5 2.0 2.2 5.3 226 chrX 9784167 intron CG32698 + chrX 9784280 intron CG32698 + chrX 9784393 intron CG32698 + chrX_17_9780001 chrX_9780001 D4-c1 2419 chrX 9791865 9791895 chrX 9791963 9791993 12 97 2.5 2.5 2.5 3.4 128 chrX 9791865 intron CG32698 + chrX 9791929 intron CG32698 + chrX 9791993 intron CG32698 + chrX_12_9790001 chrX_9790001 D4-c1 2420 chrX 9842423 9842460 chrX 9843054 9843091 9 631 27.5 26.0 26.8 0.3 668 chrX 9842423 intron CG32698 + chrX 9842757 intron CG32698 + chrX 9843091 intron CG32698 + chrX_9_9840001 chrX_9840001 D4-c1 2421 chrX 9845361 9845361 chrX 14544906 14544906 7 4699545 13.5 17.0 15.2 0.4 4699545 chrX 9845361 intron CG32698 + chrX 12195134 intron Ten-a + chrX 14544906 intergenic not near genes chrX_7_12195001 chrX_12195001 D4-c1 2422 chrX 9923396 9923423 chrX 9923488 9923508 8 91 1.5 3.5 2.5 2.3 112 chrX 9923396 intergenic not near genes chrX 9923452 intergenic not near genes chrX 9923508 intergenic not near genes chrX_8_9920001 chrX_9920001 D4-c1 2423 chrX 10151930 10151936 chrX 10152008 10152014 4 78 1.5 3.5 2.5 1.1 84 chrX 10151930 intron CR44894 - chrX 10151972 intron CR44894 - chrX 10152014 intron CR44894 - chrX_4_10150001 chrX_10150001 D4-c1 2424 chrX 10223683 10223709 chrX 10223803 10223829 5 120 1.0 3.5 2.2 1.6 146 chrX 10223683 intron CG34408 + chrX 10223756 intron CG34408 + chrX 10223829 intron CG34408 + chrX_5_10220001 chrX_10220001 D4-c1 2425 chrX 10267309 10267335 chrX 10276460 10276486 roo 4 9151 0.5 0.5 0.5 2.7 9177 chrX 10267309 3` UTR alpha-Man-I - chrX 10271898 intron alpha-Man-I - chrX 10276486 3` UTR alpha-Man-I - chrX_4_10270001 chrX_10270001 D4-c1 2426 chrX 10317556 10317575 chrX 10317635 10317654 4 79 1.0 1.5 1.2 1.8 98 chrX 10317556 intron alpha-Man-I - chrX 10317605 intron alpha-Man-I - chrX 10317654 intron alpha-Man-I - chrX_4_10315001 chrX_10315001 D4-c1 2427 chrX 10550335 10550367 chrX 10550414 10550446 6 79 1.5 3.0 2.2 1.9 111 chrX 10550335 intron spri - chrX 10550390 intron spri - chrX 10550446 intron spri - chrX_6_10550001 chrX_10550001 D4-c1 2428 chrX 10550854 10550881 chrX 10552322 10552349 hobo 4 1468 2.0 2.0 2.0 1.3 1495 chrX 10550854 intron spri - chrX 10551602 intron spri - chrX 10552349 intron spri - chrX_4_10550001 chrX_10550001 D4-c1 2429 chrX 10651634 10651645 chrX 10651751 10651762 5 117 0.0 4.0 2.0 1.7 128 chrX 10651634 intron X11Lbeta + chrX 10651698 intron X11Lbeta + chrX 10651762 intron X11Lbeta + chrX_5_10650001 chrX_10650001 D4-c1 2430 chrX 10686051 10686084 chrX 10691189 10691222 roo 11 5138 1.5 7.0 4.2 2.1 5171 chrX 10686051 intron X11Lbeta + chrX 10688636 intron X11Lbeta + chrX 10691222 intron X11Lbeta + chrX_11_10685001 chrX_10685001 D4-c1 2431 chrX 10694164 10694183 chrX 10694232 10694264 6 79 2.5 4.5 3.5 1.3 100 chrX 10694164 intron X11Lbeta + chrX 10694214 intron X11Lbeta + chrX 10694264 intron X11Lbeta + chrX_6_10690001 chrX_10690001 D4-c1 2432 chrX 10731247 10731270 chrX 10731336 10731359 6 89 1.5 3.0 2.2 1.9 112 chrX 10731247 intron CG32676 - chrX 10731303 intron CG32676 - chrX 10731359 intron CG32676 - chrX_6_10730001 chrX_10730001 D4-c1 2433 chrX 10960237 10960258 chrX 10960352 10960377 4 116 1.5 2.0 1.8 1.4 140 chrX 10960237 intron Myo10A + chrX 10960307 intron Myo10A + chrX 10960377 intron Myo10A + chrX_4_10960001 chrX_10960001 D4-c1 2434 chrX 11081688 11081713 chrX 11082616 11082641 6 928 0.0 5.0 2.5 1.7 953 chrX 11081688 intron sev - chrX 11082164 intron sev - chrX 11082641 intron sev - chrX_6_11080001 chrX_11080001 D4-c1 2435 chrX 11096001 11096021 chrX 11103103 11103124 HMS-Beagle 6 7103 2.5 2.5 2.5 1.7 7123 chrX 11096001 intergenic not near genes chrX 11099562 intergenic not near genes chrX 11103124 intron CG42249 + chrX_6_11095001 chrX_11095001 D4-c1 2436 chrX 11184247 11184280 chrX 11189325 11189357 flea 4 5079 2.5 3.0 2.8 1.1 5110 chrX 11184247 intergenic not near genes chrX 11186802 intergenic not near genes chrX 11189357 intergenic not near genes chrX_4_11185001 chrX_11185001 D4-c1 2437 chrX 11190780 11190796 chrX 11190904 11190920 10 124 1.0 2.5 1.8 3.6 140 chrX 11190780 intergenic not near genes chrX 11190850 intergenic not near genes chrX 11190920 intergenic not near genes chrX_10_11190001 chrX_11190001 D4-c1 2438 chrX 11194449 11194458 chrX 11201870 11201880 gypsy5 4 7422 2.5 5.0 3.8 0.8 7431 chrX 11194449 intergenic not near genes chrX 11198164 intergenic not near genes chrX 11201880 intergenic CG11106 + chrX_4_11195001 chrX_11195001 D4-c1 2439 chrX 11205291 11205312 chrX 11205368 11205389 4 77 1.5 3.0 2.2 1.2 98 chrX 11205291 intergenic not near genes chrX 11205340 intergenic not near genes chrX 11205389 intergenic not near genes chrX_4_11205001 chrX_11205001 D4-c1 2440 chrX 11268562 11268567 chrX 11270055 11270061 hopper2 4 1494 5.5 5.0 5.2 0.6 1499 chrX 11268562 intron CG44422 - chrX 11269312 intron CG44422 - chrX 11270061 intron CG44422 - chrX_4_11265001 chrX_11265001 D4-c1 2441 chrX 11312054 11312089 chrX 11319408 11319443 Stalker2 8 7354 2.0 3.0 2.5 2.3 7389 chrX 11312054 intergenic not near genes chrX 11315748 intergenic not near genes chrX 11319443 intergenic not near genes chrX_8_11315001 chrX_11315001 D4-c1 2442 chrX 11327195 11327230 chrX 11327272 11327307 7 77 0.5 3.5 2.0 2.3 112 chrX 11327195 intron CG1657 + chrX 11327251 intron CG1657 + chrX 11327307 intron CG1657 + chrX_7_11325001 chrX_11325001 D4-c1 2443 chrX 11379773 11379787 chrX 11379919 11379933 7 146 3.0 4.5 3.8 1.5 160 chrX 11379773 intron dlg1 + chrX 11379853 intron dlg1 + chrX 11379933 intron dlg1 + chrX_7_11375001 chrX_11375001 D4-c1 2444 chrX 11499110 11499134 chrX 11499189 11499208 4 78 1.5 2.5 2.0 1.3 98 chrX 11499110 intron Drak + chrX 11499159 intron Drak + chrX 11499208 intron Drak + chrX_4_11495001 chrX_11495001 D4-c1 2445 chrX 11535038 11535043 chrX 11541509 11541514 Burdock 4 6471 7.0 1.0 4.0 0.8 6476 chrX 11535038 intron Drak + chrX 11538276 intron Drak + chrX 11541514 intron Drak + chrX_4_11535001 chrX_11535001 D4-c1 2446 chrX 11633418 11633448 chrX 11640473 11640503 297 6 7055 2.5 4.0 3.2 1.4 7085 chrX 11633418 intron Ptp10D + chrX 11636960 intron Ptp10D + chrX 11640503 intron Ptp10D + chrX_6_11635001 chrX_11635001 D4-c1 2447 chrX 11645113 11645138 chrX 11648283 11648309 NOF 4 3170 0.5 2.5 1.5 1.6 3196 chrX 11645113 intron Ptp10D + chrX 11646711 intron Ptp10D + chrX 11648309 intron Ptp10D + chrX_4_11645001 chrX_11645001 D4-c1 2448 chrX 6545780 6545780 chrX 11858986 11858986 5 5313206 8.5 13.5 11.0 0.4 5313206 chrX 6545780 intron CG34417 + chrX 9202383 intergenic not near genes chrX 11858986 intron ATP7 + chrX_5_9200001 chrX_9200001 D4-c1 2449 chrX 12094032 12094065 chrX 12094125 12094158 9 93 1.5 1.0 1.2 4.1 126 chrX 12094032 intron,intron CR43960 +,Ten-a + chrX 12094095 intron,intron CR43960 +,Ten-a + chrX 12094158 intron,intron CR43960 +,Ten-a + chrX_9_12090001 chrX_12090001 D4-c1 2450 chrX 12168139 12168160 chrX 12173582 12173602 I-element 5 5443 2.5 2.0 2.2 1.6 5463 chrX 12168139 intron Ten-a + chrX 12170870 intron Ten-a + chrX 12173602 intron Ten-a + chrX_5_12170001 chrX_12170001 D4-c1 2451 chrX 12245686 12245716 chrX 12245769 12245799 6 83 1.0 1.0 1.0 3.0 113 chrX 12245686 intron Ten-a + chrX 12245742 intron Ten-a + chrX 12245799 intron Ten-a + chrX_6_12245001 chrX_12245001 D4-c1 2452 chrX 12277193 12277198 chrX 12277285 12277290 4 92 4.5 2.0 3.2 1.0 97 chrX 12277193 intron Ten-a + chrX 12277242 intron Ten-a + chrX 12277290 intron Ten-a + chrX_4_12275001 chrX_12275001 D4-c1 2453 chrX 12295322 12295327 chrX 12295399 12295404 4 77 3.5 3.0 3.2 1.0 82 chrX 12295322 exon Ten-a + chrX 12295363 intron Ten-a + chrX 12295404 intron Ten-a + chrX_4_12295001 chrX_12295001 D4-c1 2454 chrX 12528114 12528135 chrX 12528196 12528217 7 82 1.0 3.0 2.0 2.3 103 chrX 12528114 intron CG43921 - chrX 12528166 intron CG43921 - chrX 12528217 intron CG43921 - chrX_7_12525001 chrX_12525001 D4-c1 2455 chrX 12557153 12557161 chrX 12557230 12557238 5 77 5.5 6.5 6.0 0.7 85 chrX 12557153 intron CG43921 - chrX 12557196 intron CG43921 - chrX 12557238 intron CG43921 - chrX_5_12555001 chrX_12555001 D4-c1 2456 chrX 12557480 12557580 chrX 12557561 12557679 6 85 0.0 0.0 0.0 6.0 199 chrX 12557480 intron CG43921 - chrX 12557580 intron CG43921 - chrX 12557679 intron CG43921 - chrX_6_12555001 chrX_12555001 D4-c1 2457 chrX 12752277 12752310 chrX 12752365 12752398 13 88 3.0 3.5 3.2 3.1 121 chrX 12752277 5` UTR CR44619 + chrX 12752338 5` UTR CR44619 + chrX 12752398 5` UTR CR44619 + chrX_13_12750001 chrX_12750001 D4-c1 2458 chrX 12930600 12930610 chrX 12937717 12937727 HMS-Beagle 4 7117 5.0 5.0 5.0 0.7 7127 chrX 12930600 intron fne + chrX 12934164 intron fne + chrX 12937727 intron fne + chrX_4_12930001 chrX_12930001 D4-c1 2459 chrX 12953893 12953923 chrX 12954032 12954062 5 139 0.0 2.0 1.0 2.5 169 chrX 12953893 intron hec - chrX 12953978 intron hec - chrX 12954062 intron hec - chrX_5_12950001 chrX_12950001 D4-c1 2460 chrX 12971686 12971721 chrX 12971764 12971790 10 76 4.0 3.5 3.8 2.1 104 chrX 12971686 intron,exon CR43636 -,CG15721 + chrX 12971738 intron,exon CR43636 -,CG15721 + chrX 12971790 intron,exon CR43636 -,CG15721 + chrX_10_12970001 chrX_12970001 D4-c1 2461 chrX 12985143 12985156 chrX 12985229 12985243 6 87 2.0 3.0 2.5 1.7 100 chrX 12985143 intergenic CG32643 + chrX 12985193 intergenic CG32643 + chrX 12985243 intergenic CG32643 + chrX_6_12985001 chrX_12985001 D4-c1 2462 chrX 13104091 13104101 chrX 13104173 13104183 4 82 0.0 0.5 0.2 3.3 92 chrX 13104091 intron CG43313 - chrX 13104137 intron CG43313 - chrX 13104183 intron CG43313 - chrX_4_13100001 chrX_13100001 D4-c1 2463 chrX 13146595 13146631 chrX 13146684 13146720 8 89 2.5 2.0 2.2 2.5 125 chrX 13146595 intron CG32645 + chrX 13146658 intron CG32645 + chrX 13146720 intron CG32645 + chrX_8_13145001 chrX_13145001 D4-c1 2464 chrX 13340863 13340893 chrX 13340949 13340979 10 86 3.0 1.0 2.0 3.3 116 chrX 13340863 3` UTR CG15747 + chrX 13340921 3` UTR CG15747 + chrX 13340979 3` UTR CG15747 + chrX_10_13340001 chrX_13340001 D4-c1 2465 chrX 13374834 13374863 chrX 13374915 13374944 9 81 2.5 2.0 2.2 2.8 110 chrX 13374834 intron CG1640 + chrX 13374889 intron CG1640 + chrX 13374944 intron CG1640 + chrX_9_13370001 chrX_13370001 D4-c1 2466 chrX 13429483 13429495 chrX 13430606 13430645 jockey 6 1146 2.5 1.5 2.0 2.0 1162 chrX 13429483 intergenic not near genes chrX 13430064 intergenic not near genes chrX 13430645 intergenic not near genes chrX_6_13430001 chrX_13430001 D4-c1 2467 chrX 13443411 13443420 chrX 13443487 13443497 6 78 6.5 8.0 7.2 0.7 86 chrX 13443411 intergenic not near genes chrX 13443454 intergenic not near genes chrX 13443497 intergenic not near genes chrX_6_13440001 chrX_13440001 D4-c1 2468 chrX 13463644 13463654 chrX 13469222 13469232 mdg3 4 5578 6.5 3.5 5.0 0.7 5588 chrX 13463644 intron Neto + chrX 13466438 intron Neto + chrX 13469232 intron Neto + chrX_4_13465001 chrX_13465001 D4-c1 2469 chrX 13493198 13493219 chrX 13493277 13493298 6 79 2.0 2.0 2.0 2.0 100 chrX 13493198 intron Neto + chrX 13493248 intron Neto + chrX 13493298 intron Neto + chrX_6_13490001 chrX_13490001 D4-c1 2470 chrX 13530096 13530124 chrX 13534519 13534541 8 4416 18.5 25.0 21.8 0.4 4445 chrX 13530096 exon CG44428 - chrX 13532318 intergenic not near genes chrX 13534541 exon CG15756 + chrX_8_13530001 chrX_13530001 D4-c1 2471 chrX 13577753 13577779 chrX 13577989 13578016 6 237 3.5 3.5 3.5 1.3 263 chrX 13577753 intron Tango13 + chrX 13577884 intron Tango13 + chrX 13578016 intron Tango13 + chrX_6_13575001 chrX_13575001 D4-c1 2472 chrX 13734098 13734112 chrX 13734195 13734208 10 97 2.0 6.0 4.0 2.0 110 chrX 13734098 intron g - chrX 13734153 intron g - chrX 13734208 intron g - chrX_10_13730001 chrX_13730001 D4-c1 2473 chrX 13739102 13739136 chrX 13739179 13739213 9 77 2.5 0.0 1.2 4.1 111 chrX 13739102 intron,3` UTR Grip91 -,CG11134 + chrX 13739158 intron,3` UTR Grip91 -,CG11134 + chrX 13739213 intron Grip91 - chrX_9_13735001 chrX_13735001 D4-c1 2474 chrX 14105020 14105055 chrX 14114172 14114207 roo 10 9150 4.5 3.5 4.0 2.0 9187 chrX 14105020 intergenic not near genes chrX 14109614 intergenic not near genes chrX 14114207 5` UTR CR44657 + chrX_10_14105001 chrX_14105001 D4-c1 2475 chrX 14131500 14131522 chrX 14131582 14131604 9 80 1.0 5.0 3.0 2.2 104 chrX 14131500 intergenic not near genes chrX 14131552 intergenic not near genes chrX 14131604 intergenic not near genes chrX_9_14130001 chrX_14130001 D4-c1 2476 chrX 14214567 14214589 chrX 14214875 14214896 5 308 0.5 1.5 1.0 2.5 329 chrX 14214567 intron l(1)G0007 + chrX 14214732 intron l(1)G0007 + chrX 14214896 intron l(1)G0007 + chrX_5_14210001 chrX_14210001 D4-c1 2477 chrX 14296457 14296487 chrX 14296534 14296564 7 77 2.0 2.0 2.0 2.3 107 chrX 14296457 intergenic not near genes chrX 14296510 intergenic not near genes chrX 14296564 intergenic not near genes chrX_7_14295001 chrX_14295001 D4-c1 2478 chrX 14414222 14414248 chrX 14414300 14414326 4 78 1.5 0.5 1.0 2.0 104 chrX 14414222 intron dpr8 + chrX 14414274 intron dpr8 + chrX 14414326 intron dpr8 + chrX_4_14410001 chrX_14410001 D4-c1 2479 chrX 14636470 14636496 chrX 14641912 14641938 I-element 8 5441 2.5 5.0 3.8 1.7 5468 chrX 14636470 intron NetA - chrX 14639204 intron NetA - chrX 14641938 intron NetA - chrX_8_14635001 chrX_14635001 D4-c1 2480 chrX 14714050 14714065 chrX 14714133 14714148 4 83 1.5 3.0 2.2 1.2 98 chrX 14714050 intron NetB - chrX 14714099 intron NetB - chrX 14714148 intron NetB - chrX_4_14710001 chrX_14710001 D4-c1 2481 chrX 14778035 14778061 chrX 14782833 14782859 Doc 9 4798 2.5 6.0 4.2 1.7 4824 chrX 14778035 intergenic CG5347 + chrX 14780447 intergenic not near genes chrX 14782859 intergenic Ag5r2 - chrX_9_14780001 chrX_14780001 D4-c1 2482 chrX 14818766 14818794 chrX 14823971 14823999 copia 5 5205 5.5 4.5 5.0 0.8 5233 chrX 14818766 intron rut - chrX 14821382 intron rut - chrX 14823999 intron rut - chrX_5_14820001 chrX_14820001 D4-c1 2483 chrX 14936857 14936889 chrX 14946115 14946147 roo 9 9258 4.0 3.5 3.8 1.9 9290 chrX 14936857 intron pdgy - chrX 14941502 intron pdgy - chrX 14946147 intron pdgy - chrX_9_14940001 chrX_14940001 D4-c1 2484 chrX 15190614 15190643 chrX 15190698 15190727 7 84 1.5 1.0 1.2 3.2 113 chrX 15190614 intergenic not near genes chrX 15190670 intergenic not near genes chrX 15190727 intergenic not near genes chrX_7_15190001 chrX_15190001 D4-c1 2485 chrX 15217276 15217298 chrX 15217361 15217376 6 84 4.0 1.5 2.8 1.6 100 chrX 15217276 intergenic not near genes chrX 15217326 intergenic not near genes chrX 15217376 intergenic not near genes chrX_6_15215001 chrX_15215001 D4-c1 2486 chrX 15248260 15248293 chrX 15248337 15248370 7 77 1.0 1.5 1.2 3.2 110 chrX 15248260 intergenic not near genes chrX 15248315 intergenic not near genes chrX 15248370 intergenic not near genes chrX_7_15245001 chrX_15245001 D4-c1 2487 chrX 15268876 15268895 chrX 15268957 15268976 4 80 5.0 2.5 3.8 0.8 100 chrX 15268876 intergenic not near genes chrX 15268926 intergenic not near genes chrX 15268976 intergenic not near genes chrX_4_15265001 chrX_15265001 D4-c1 2488 chrX 15273700 15273737 chrX 15274868 15274904 1360 11 1168 4.5 3.5 4.0 2.2 1204 chrX 15273700 intergenic not near genes chrX 15274302 intergenic not near genes chrX 15274904 intergenic not near genes chrX_11_15270001 chrX_15270001 D4-c1 2489 chrX 15365790 15365824 chrX 15365872 15365906 9 82 4.0 0.5 2.2 2.8 116 chrX 15365790 intron acj6 - chrX 15365848 intron acj6 - chrX 15365906 intron acj6 - chrX_9_15365001 chrX_15365001 D4-c1 2490 chrX 15413051 15413082 chrX 15417354 15417381 Juan 9 4303 5.5 4.5 5.0 1.5 4330 chrX 15413051 intron Cngl - chrX 15415216 intron Cngl - chrX 15417381 intron Cngl - chrX_9_15415001 chrX_15415001 D4-c1 2491 chrX 15424158 15424186 chrX 15424357 15424385 8 199 0.5 3.5 2.0 2.7 227 chrX 15424158 intron Cngl - chrX 15424272 intron Cngl - chrX 15424385 intron Cngl - chrX_8_15420001 chrX_15420001 D4-c1 2492 chrX 15435698 15435705 chrX 15436132 15436139 rover 5 434 0.5 8.0 4.2 1.0 441 chrX 15435698 intron Cngl - chrX 15435918 intron Cngl - chrX 15436139 intron Cngl - chrX_5_15435001 chrX_15435001 D4-c1 2493 chrX 15543274 15543297 chrX 15543346 15543380 6 81 5.0 2.5 3.8 1.2 106 chrX 15543274 intron Ac13E - chrX 15543327 intron Ac13E - chrX 15543380 intron Ac13E - chrX_6_15540001 chrX_15540001 D4-c1 2494 chrX 15589431 15589460 chrX 15589611 15589640 10 180 3.5 6.0 4.8 1.7 209 chrX 15589431 intron CG9220 - chrX 15589536 intron CG9220 - chrX 15589640 exon CG9220 - chrX_10_15585001 chrX_15585001 D4-c1 2495 chrX 15591302 15591335 chrX 15591597 15591630 7 295 17.0 21.0 19.0 0.3 328 chrX 15591302 intron CG9220 - chrX 15591466 intron CG9220 - chrX 15591630 intron CG9220 - chrX_7_15590001 chrX_15590001 D4-c1 2496 chrX 15681394 15681413 chrX 15681477 15681496 6 83 2.0 0.0 1.0 3.0 102 chrX 15681394 intergenic not near genes chrX 15681445 intergenic not near genes chrX 15681496 intergenic not near genes chrX_6_15680001 chrX_15680001 D4-c1 2497 chrX 16004405 16004440 chrX 16004492 16004527 6 87 3.5 1.0 2.2 1.9 122 chrX 16004405 intron vap - chrX 16004466 intron vap - chrX 16004527 intron vap - chrX_6_16000001 chrX_16000001 D4-c1 2498 chrX 16129585 16129595 chrX 16129672 16129682 4 87 0.0 2.5 1.2 1.8 97 chrX 16129585 intron disco-r - chrX 16129634 intron disco-r - chrX 16129682 intron disco-r - chrX_4_16125001 chrX_16125001 D4-c1 2499 chrX 16156135 16156160 chrX 16156212 16156235 4 73 2.5 7.0 4.8 0.7 100 chrX 16156135 intergenic not near genes chrX 16156185 intergenic not near genes chrX 16156235 intergenic not near genes chrX_4_16155001 chrX_16155001 D4-c1 2500 chrX 16273805 16273836 chrX 16276727 16276758 12 2922 23.5 32.0 27.8 0.4 2953 chrX 16273805 intron,3` UTR kat80 -,Mfe2 + chrX 16275282 intron kat80 - chrX 16276758 exon Prosalpha4 + chrX_12_16275001 chrX_16275001 D4-c1 2501 chrX 16329438 16329449 chrX 16329522 16329533 6 84 0.0 7.0 3.5 1.3 95 chrX 16329438 intron CG9919 - chrX 16329486 intron CG9919 - chrX 16329533 exon CG9919 - chrX_6_16325001 chrX_16325001 D4-c1 2502 chrX 16492647 16492674 chrX 16498225 16498252 mdg3 10 5578 4.0 3.5 3.8 2.1 5605 chrX 16492647 intron para - chrX 16495450 intron para - chrX 16498252 intron para - chrX_10_16495001 chrX_16495001 D4-c1 2503 chrX 16519944 16519964 chrX 16520031 16520051 4 87 2.5 3.5 3.0 1.0 107 chrX 16519944 intron para - chrX 16519998 intron para - chrX 16520051 intron para - chrX_4_16515001 chrX_16515001 D4-c1 2504 chrX 16529426 16529443 chrX 16529538 16529555 5 112 0.0 5.0 2.5 1.4 129 chrX 16529426 intron para - chrX 16529490 intron para - chrX 16529555 intron para - chrX_5_16525001 chrX_16525001 D4-c1 2505 chrX 16650931 16650956 chrX 16651009 16651034 5 78 2.5 0.0 1.2 2.3 103 chrX 16650931 intergenic CG32573 +,CG42512 + chrX 16650982 intergenic CG32573 +,CG42512 + chrX 16651034 intergenic CG32573 +,CG42512 + chrX_5_16650001 chrX_16650001 D4-c1 2506 chrX 16720884 16720893 chrX 16721039 16721048 4 155 0.0 2.5 1.2 1.8 164 chrX 16720884 intron CG34325 - chrX 16720966 intron CG34325 - chrX 16721048 intron CG34325 - chrX_4_16720001 chrX_16720001 D4-c1 2507 chrX 16785282 16785299 chrX 16785387 16785404 4 105 1.5 2.0 1.8 1.4 122 chrX 16785282 3` UTR CG9609 - chrX 16785343 3` UTR CG9609 - chrX 16785404 3` UTR CG9609 - chrX_4_16785001 chrX_16785001 D4-c1 2508 chrX 16821241 16821259 chrX 16821322 16821340 6 81 3.0 2.0 2.5 1.7 99 chrX 16821241 intron CG4829 + chrX 16821290 intron CG4829 + chrX 16821340 intron CG4829 + chrX_6_16820001 chrX_16820001 D4-c1 2509 chrX 16936003 16936026 chrX 16936422 16936445 jockey 5 419 0.0 2.5 1.2 2.3 442 chrX 16936003 intron CG4928 + chrX 16936224 intron CG4928 + chrX 16936445 intron CG4928 + chrX_5_16935001 chrX_16935001 D4-c1 2510 chrX 17011963 17011995 chrX 17012047 17012079 9 84 0.5 2.0 1.2 4.1 116 chrX 17011963 intron CG45002 - chrX 17012021 intron CG45002 - chrX 17012079 intron CG45002 - chrX_9_17010001 chrX_17010001 D4-c1 2511 chrX 17063177 17063203 chrX 17063265 17063291 9 88 2.5 2.0 2.2 2.8 114 chrX 17063177 intron CG45002 - chrX 17063234 intron CG45002 - chrX 17063291 intron CG45002 - chrX_9_17060001 chrX_17060001 D4-c1 2512 chrX 17122647 17122670 chrX 17122739 17122762 5 92 2.0 4.0 3.0 1.2 115 chrX 17122647 intron CG5004 + chrX 17122704 intron CG5004 + chrX 17122762 intron CG5004 + chrX_5_17120001 chrX_17120001 D4-c1 2513 chrX 17221827 17221858 chrX 17221914 17221945 5 87 3.0 1.5 2.2 1.6 118 chrX 17221827 intron CG5172 + chrX 17221886 intron CG5172 + chrX 17221945 intron CG5172 + chrX_5_17220001 chrX_17220001 D4-c1 2514 chrX 17234263 17234285 chrX 17234358 17234369 5 93 3.0 0.0 1.5 2.0 106 chrX 17234263 intron f + chrX 17234316 intron f + chrX 17234369 intron f + chrX_5_17230001 chrX_17230001 D4-c1 2515 chrX 17282874 17282906 chrX 17282953 17282985 12 79 3.0 0.0 1.5 4.8 111 chrX 17282874 intron CG5445 + chrX 17282930 5` UTR CG5445 + chrX 17282985 intron CG5445 + chrX_12_17280001 chrX_17280001 D4-c1 2516 chrX 17343371 17343382 chrX 17343457 17343468 4 86 0.0 1.0 0.5 2.7 97 chrX 17343371 intergenic not near genes chrX 17343420 intergenic not near genes chrX 17343468 intergenic not near genes chrX_4_17340001 chrX_17340001 D4-c1 2517 chrX 17352596 17352619 chrX 17352700 17352723 12 104 0.0 3.0 1.5 4.8 127 chrX 17352596 intergenic not near genes chrX 17352660 intergenic not near genes chrX 17352723 intergenic not near genes chrX_12_17350001 chrX_17350001 D4-c1 2518 chrX 17435749 17435784 chrX 17435826 17435861 10 77 2.0 4.0 3.0 2.5 112 chrX 17435749 intron CG12994 - chrX 17435805 intron CG12994 - chrX 17435861 intron CG12994 - chrX_10_17435001 chrX_17435001 D4-c1 2519 chrX 17476462 17476489 chrX 17476540 17476541 5 73 5.0 3.5 4.2 1.0 79 chrX 17476462 intron CG43658 - chrX 17476502 intron CG43658 - chrX 17476541 intron CG43658 - chrX_5_17475001 chrX_17475001 D4-c1 2520 chrX 17536860 17536882 chrX 17536944 17536966 4 84 1.5 7.5 4.5 0.7 106 chrX 17536860 intron CG43658 - chrX 17536913 intron CG43658 - chrX 17536966 intron CG43658 - chrX_4_17535001 chrX_17535001 D4-c1 2521 chrX 17545006 17545038 chrX 17545089 17545120 5 83 1.0 4.0 2.5 1.4 114 chrX 17545006 intron CG43658 - chrX 17545063 intron CG43658 - chrX 17545120 intron CG43658 - chrX_5_17545001 chrX_17545001 D4-c1 2522 chrX 17716586 17716603 chrX 17716674 17716691 5 88 2.0 2.5 2.2 1.6 105 chrX 17716586 intron CG42684 + chrX 17716638 intron CG42684 + chrX 17716691 intron CG42684 + chrX_5_17715001 chrX_17715001 D4-c1 2523 chrX 17740371 17740403 chrX 17740449 17740481 5 78 4.0 4.5 4.2 1.0 110 chrX 17740371 intron CG42684 + chrX 17740426 intron CG42684 + chrX 17740481 intron CG42684 + chrX_5_17740001 chrX_17740001 D4-c1 2524 chrX 17771309 17771333 chrX 17771390 17771413 7 80 3.5 3.0 3.2 1.7 104 chrX 17771309 intron unc-4 + chrX 17771361 intron unc-4 + chrX 17771413 intron unc-4 + chrX_7_17770001 chrX_17770001 D4-c1 2525 chrX 17820624 17820646 chrX 17820731 17820753 11 107 0.0 2.5 1.2 5.0 129 chrX 17820624 intergenic Socs16D - chrX 17820688 intergenic Socs16D - chrX 17820753 intergenic Socs16D - chrX_11_17820001 chrX_17820001 D4-c1 2526 chrX 17879670 17879681 chrX 17879777 17879788 5 107 2.5 6.5 4.5 0.9 118 chrX 17879670 intron mnb - chrX 17879729 intron mnb - chrX 17879788 intron mnb - chrX_5_17875001 chrX_17875001 D4-c1 2527 chrX 18179566 18179588 chrX 18179809 18179831 5 243 1.5 2.5 2.0 1.7 265 chrX 18179566 intron Frq2 + chrX 18179698 intron Frq2 + chrX 18179831 intron Frq2 + chrX_5_18175001 chrX_18175001 D4-c1 2528 chrX 18194068 18194094 chrX 18194604 18194624 BS 6 535 2.5 2.5 2.5 1.7 556 chrX 18194068 intron Frq2 + chrX 18194346 intron Frq2 + chrX 18194624 intron Frq2 + chrX_6_18190001 chrX_18190001 D4-c1 2529 chrX 18337426 18337452 chrX 18337527 18337553 6 101 1.0 2.0 1.5 2.4 127 chrX 18337426 intron CG6123 - chrX 18337490 intron CG6123 - chrX 18337553 intron CG6123 - chrX_6_18335001 chrX_18335001 D4-c1 2530 chrX 18407399 18407429 chrX 18407484 18407514 9 85 4.5 3.0 3.8 1.9 115 chrX 18407399 intron CG32549 - chrX 18407456 intron CG32549 - chrX 18407514 intron CG32549 - chrX_9_18405001 chrX_18405001 D4-c1 2531 chrX 18429493 18429525 chrX 18434805 18434837 Transpac 4 5312 4.5 3.0 3.8 0.8 5344 chrX 18429493 intergenic not near genes chrX 18432165 intergenic not near genes chrX 18434837 intergenic not near genes chrX_4_18430001 chrX_18430001 D4-c1 2532 chrX 18467228 18467256 chrX 18467393 18467421 10 165 2.5 3.0 2.8 2.6 193 chrX 18467228 intron CG32547 - chrX 18467324 intron CG32547 - chrX 18467421 intron CG32547 - chrX_10_18465001 chrX_18465001 D4-c1 2533 chrX 18486109 18486143 chrX 18486199 18486233 11 90 3.5 2.0 2.8 2.9 124 chrX 18486109 exon psh - chrX 18486171 intron psh - chrX 18486233 intron psh - chrX_11_18485001 chrX_18485001 D4-c1 2534 chrX 18490067 18490105 chrX 18490190 18490228 12 122 2.0 4.0 3.0 3.0 161 chrX 18490067 intergenic CG15046 - chrX 18490148 intergenic not near genes chrX 18490228 intergenic not near genes chrX_12_18490001 chrX_18490001 D4-c1 2535 chrX 18574793 18574826 chrX 18574874 18574907 9 81 1.0 0.0 0.5 6.0 114 chrX 18574793 intergenic not near genes chrX 18574850 intergenic not near genes chrX 18574907 intergenic not near genes chrX_9_18570001 chrX_18570001 D4-c1 2536 chrX 18595490 18595518 chrX 18595574 18595602 13 84 2.0 2.0 2.0 4.3 112 chrX 18595490 intergenic not near genes chrX 18595546 intergenic not near genes chrX 18595602 intergenic not near genes chrX_13_18595001 chrX_18595001 D4-c1 2537 chrX 18645011 18645049 chrX 18645110 18645148 15 99 1.5 3.5 2.5 4.3 137 chrX 18645011 intron Rip11 - chrX 18645080 intron Rip11 - chrX 18645148 intron Rip11 - chrX_15_18645001 chrX_18645001 D4-c1 2538 chrX 18662443 18662458 chrX 18662533 18662533 5 91 5.5 4.5 5.0 0.8 90 chrX 18662443 intergenic CG6696 - chrX 18662488 intergenic CG6696 - chrX 18662533 intergenic CG6696 - chrX_5_18660001 chrX_18660001 D4-c1 2539 chrX 18698848 18698878 chrX 18698966 18698996 6 118 2.0 3.0 2.5 1.7 148 chrX 18698848 intergenic not near genes chrX 18698922 intergenic not near genes chrX 18698996 intergenic not near genes chrX_6_18695001 chrX_18695001 D4-c1 2540 chrX 18749870 18749900 chrX 18749955 18749985 5 85 2.0 2.0 2.0 1.7 115 chrX 18749870 intergenic not near genes chrX 18749928 intergenic not near genes chrX 18749985 intergenic not near genes chrX_5_18745001 chrX_18745001 D4-c1 2541 chrX 18896515 18896545 chrX 18896627 18896657 8 112 2.0 1.0 1.5 3.2 142 chrX 18896515 3` UTR CG7349 + chrX 18896586 intergenic CG7349 + chrX 18896657 intergenic CG7349 + chrX_8_18895001 chrX_18895001 D4-c1 2542 chrX 18947502 18947535 chrX 18947596 18947629 6 94 0.0 3.5 1.8 2.1 127 chrX 18947502 intron CG43759 + chrX 18947566 intron CG43759 + chrX 18947629 intron CG43759 + chrX_6_18945001 chrX_18945001 D4-c1 2543 chrX 19058142 19058176 chrX 19058229 19058263 10 87 1.0 0.5 0.8 5.6 121 chrX 19058142 intron CG14190 + chrX 19058202 intron CG14190 + chrX 19058263 intron CG14190 + chrX_10_19055001 chrX_19055001 D4-c1 2544 chrX 19060409 19060436 chrX 19065191 19065221 Doc 9 4785 1.0 0.5 0.8 5.0 4812 chrX 19060409 intron CG14190 + chrX 19062815 intron CG14190 + chrX 19065221 intron CG14190 + chrX_9_19060001 chrX_19060001 D4-c1 2545 chrX 19073682 19073698 chrX 19073770 19073786 4 88 3.0 3.0 3.0 1.0 104 chrX 19073682 intergenic not near genes chrX 19073734 intergenic not near genes chrX 19073786 intergenic not near genes chrX_4_19070001 chrX_19070001 D4-c1 2546 chrX 19080329 19080356 chrX 19080436 19080463 10 107 0.5 3.0 1.8 3.6 134 chrX 19080329 intergenic not near genes chrX 19080396 intergenic not near genes chrX 19080463 intergenic not near genes chrX_10_19080001 chrX_19080001 D4-c1 2547 chrX 19084110 19084123 chrX 19084231 19084244 6 121 0.0 0.0 0.0 6.0 134 chrX 19084110 intergenic CR45503 + chrX 19084177 intergenic CR45503 + chrX 19084244 intergenic CR45503 + chrX_6_19080001 chrX_19080001 D4-c1 2548 chrX 19099662 19099683 chrX 19099746 19099766 8 84 3.0 5.5 4.2 1.5 104 chrX 19099662 intergenic not near genes chrX 19099714 intergenic not near genes chrX 19099766 intergenic not near genes chrX_8_19095001 chrX_19095001 D4-c1 2549 chrX 19109108 19109136 chrX 19109293 19109321 10 185 0.0 1.5 0.8 5.6 213 chrX 19109108 intergenic not near genes chrX 19109214 intergenic not near genes chrX 19109321 intergenic not near genes chrX_10_19105001 chrX_19105001 D4-c1 2550 chrX 19119697 19119706 chrX 19119784 19119793 5 87 2.5 0.5 1.5 2.0 96 chrX 19119697 intergenic not near genes chrX 19119745 intergenic not near genes chrX 19119793 intergenic not near genes chrX_5_19115001 chrX_19115001 D4-c1 2551 chrX 19124434 19124456 chrX 19124523 19124545 6 89 0.5 2.0 1.2 2.7 111 chrX 19124434 intergenic CG15882 - chrX 19124490 intergenic CG15882 - chrX 19124545 intergenic CG15882 -,tgy - chrX_6_19120001 chrX_19120001 D4-c1 2552 chrX 19125697 19125721 chrX 19125827 19125851 12 130 3.0 6.5 4.8 2.1 154 chrX 19125697 intron tgy - chrX 19125774 intron tgy - chrX 19125851 intron tgy - chrX_12_19125001 chrX_19125001 D4-c1 2553 chrX 19136553 19136583 chrX 19143472 19143503 412 6 6920 2.0 5.0 3.5 1.3 6950 chrX 19136553 intergenic not near genes chrX 19140028 intergenic not near genes chrX 19143503 3` UTR RhoGAP18B - chrX_6_19140001 chrX_19140001 D4-c1 2554 chrX 13057298 13057299 chrX 19242812 19242812 6 6185513 8.0 6.5 7.2 0.7 6185514 chrX 13057298 intron rad + chrX 16150055 intergenic not near genes chrX 19242812 intergenic not near genes chrX_6_16150001 chrX_16150001 D4-c1 2555 chrX 13057297 13057301 chrX 19242813 19242814 21 6185513 7.5 6.5 7.0 2.6 6185517 chrX 13057297 intron rad + chrX 16150056 intergenic not near genes chrX 19242814 intergenic not near genes chrX_21_16150001 chrX_16150001 D4-c1 2556 chrX 19280999 19281030 chrX 19281129 19281160 6 130 0.0 0.5 0.2 5.0 161 chrX 19280999 intergenic CG8034 - chrX 19281080 intergenic CG8034 - chrX 19281160 intergenic CG8034 - chrX_6_19280001 chrX_19280001 D4-c1 2557 chrX 19339743 19339770 chrX 19339819 19339847 4 77 2.0 1.5 1.8 1.4 104 chrX 19339743 intron nAChRalpha7 - chrX 19339795 intron nAChRalpha7 - chrX 19339847 intron nAChRalpha7 - chrX_4_19335001 chrX_19335001 D4-c1 2558 chrX 19356985 19357014 chrX 19358427 19358456 NOF 5 1442 2.5 0.0 1.2 2.3 1471 chrX 19356985 intron kek5 + chrX 19357720 intron kek5 + chrX 19358456 intron kek5 + chrX_5_19355001 chrX_19355001 D4-c1 2559 chrX 19380156 19380185 chrX 19380398 19380426 pogo 8 242 2.5 1.0 1.8 2.9 270 chrX 19380156 intron kek5 + chrX 19380291 intron kek5 + chrX 19380426 intron kek5 + chrX_8_19380001 chrX_19380001 D4-c1 2560 chrX 19461149 19461162 chrX 19461246 19461259 6 97 2.5 3.0 2.8 1.6 110 chrX 19461149 intron kek5 + chrX 19461204 intron kek5 + chrX 19461259 intron kek5 + chrX_6_19460001 chrX_19460001 D4-c1 2561 chrX 19472118 19472155 chrX 19472689 19472726 jockey 4 571 2.0 3.0 2.5 1.1 608 chrX 19472118 intergenic kek5 + chrX 19472422 intergenic not near genes chrX 19472726 intergenic not near genes chrX_4_19470001 chrX_19470001 D4-c1 2562 chrX 19710070 19710103 chrX 19711857 19711890 S-element 10 1787 2.0 2.5 2.2 3.1 1820 chrX 19710070 intron meso18E - chrX 19710980 intron meso18E - chrX 19711890 intron meso18E - chrX_10_19710001 chrX_19710001 D4-c1 2563 chrX 19744633 19744662 chrX 19744754 19744789 11 124 23.0 20.0 21.5 0.5 156 chrX 19744633 5` UTR,exon CG33932 +,Rpp20 + chrX 19744711 intron,intron CG33932 +,Rpp20 + chrX 19744789 5` UTR,exon CG33932 +,Rpp20 + chrX_11_19740001 chrX_19740001 D4-c1 2564 chrX 19838504 19838528 chrX 19838583 19838607 6 79 3.0 1.0 2.0 2.0 103 chrX 19838504 intron pico - chrX 19838556 intron pico - chrX 19838607 intron pico - chrX_6_19835001 chrX_19835001 D4-c1 2565 chrX 19881456 19881485 chrX 19881538 19881567 7 82 2.0 2.0 2.0 2.3 111 chrX 19881456 intron Hers + chrX 19881512 intron Hers + chrX 19881567 intron Hers + chrX_7_19880001 chrX_19880001 D4-c1 2566 chrX 19884086 19884108 chrX 19884163 19884185 8 77 4.0 2.0 3.0 2.0 99 chrX 19884086 intron Hers + chrX 19884136 intron Hers + chrX 19884185 intron Hers + chrX_8_19880001 chrX_19880001 D4-c1 2567 chrX 19897379 19897416 chrX 19897457 19897494 9 78 2.0 3.5 2.8 2.4 115 chrX 19897379 intron Hers + chrX 19897436 intron Hers + chrX 19897494 intron Hers + chrX_9_19895001 chrX_19895001 D4-c1 2568 chrX 19983864 19983900 chrX 19983945 19983981 11 81 0.5 1.5 1.0 5.5 117 chrX 19983864 intergenic not near genes chrX 19983922 intergenic not near genes chrX 19983981 intergenic not near genes chrX_11_19980001 chrX_19980001 D4-c1 2569 chrX 19992414 19992432 chrX 19992491 19992495 5 74 8.5 4.0 6.2 0.7 81 chrX 19992414 intergenic not near genes chrX 19992454 intergenic not near genes chrX 19992495 intergenic not near genes chrX_5_19990001 chrX_19990001 D4-c1 2570 chrX 20041531 20041566 chrX 20041612 20041647 8 81 2.0 2.0 2.0 2.7 116 chrX 20041531 intron Dop2R - chrX 20041589 intron Dop2R - chrX 20041647 intron Dop2R - chrX_8_20040001 chrX_20040001 D4-c1 2571 chrX 20052787 20052811 chrX 20052872 20052896 8 85 3.5 3.5 3.5 1.8 109 chrX 20052787 intron Dop2R - chrX 20052842 intron Dop2R - chrX 20052896 intron Dop2R - chrX_8_20050001 chrX_20050001 D4-c1 2572 chrX 20105197 20105228 chrX 20105308 20105330 9 103 29.5 23.5 26.5 0.3 133 chrX 20105197 intergenic not near genes chrX 20105264 intergenic not near genes chrX 20105330 intergenic not near genes chrX_9_20105001 chrX_20105001 D4-c1 2573 chrX 20271501 20271521 chrX 20271594 20271614 7 93 2.5 0.0 1.2 3.2 113 chrX 20271501 intergenic not near genes chrX 20271558 intergenic not near genes chrX 20271614 intergenic not near genes chrX_7_20270001 chrX_20270001 D4-c1 2574 chrX 20279756 20279777 chrX 20279838 20279859 7 82 1.0 2.0 1.5 2.8 103 chrX 20279756 intergenic not near genes chrX 20279808 intergenic not near genes chrX 20279859 intergenic not near genes chrX_7_20275001 chrX_20275001 D4-c1 2575 chrX 20312881 20312902 chrX 20312960 20312981 5 79 3.5 1.0 2.2 1.6 100 chrX 20312881 intron CG1504 - chrX 20312931 intron CG1504 - chrX 20312981 intron CG1504 - chrX_5_20310001 chrX_20310001 D4-c1 2576 chrX 20317777 20317802 chrX 20317861 20317886 9 84 3.0 6.0 4.5 1.6 109 chrX 20317777 intron CG1504 - chrX 20317832 intron CG1504 - chrX 20317886 intron CG1504 - chrX_9_20315001 chrX_20315001 D4-c1 2577 chrX 20369319 20369333 chrX 20369404 20369418 7 85 3.0 3.5 3.2 1.7 99 chrX 20369319 intergenic not near genes chrX 20369368 intergenic not near genes chrX 20369418 intergenic not near genes chrX_7_20365001 chrX_20365001 D4-c1 2578 chrX 20377329 20377349 chrX 20378797 20378817 hobo 8 1468 1.5 6.5 4.0 1.6 1488 chrX 20377329 intergenic not near genes chrX 20378073 intergenic not near genes chrX 20378817 intergenic not near genes chrX_8_20375001 chrX_20375001 D4-c1 2579 chrX 20432174 20432203 chrX 20432251 20432280 13 77 6.0 5.0 5.5 2.0 106 chrX 20432174 exon mal + chrX 20432227 exon mal + chrX 20432280 exon mal + chrX_13_20430001 chrX_20430001 D4-c1 2580 chrX 20448438 20448445 chrX 20448523 20448530 5 85 2.0 0.0 1.0 2.5 92 chrX 20448438 intergenic not near genes chrX 20448484 intergenic not near genes chrX 20448530 intergenic not near genes chrX_5_20445001 chrX_20445001 D4-c1 2581 chrX 20493911 20493930 chrX 20494073 20494092 4 162 0.0 1.5 0.8 2.2 181 chrX 20493911 intron RhoGAP19D - chrX 20494002 intron RhoGAP19D - chrX 20494092 intron RhoGAP19D - chrX_4_20490001 chrX_20490001 D4-c1 2582 chrX 20504128 20504152 chrX 20505650 20505674 transib2 9 1522 0.5 3.5 2.0 3.0 1546 chrX 20504128 intron RhoGAP19D - chrX 20504901 intron RhoGAP19D - chrX 20505674 intron RhoGAP19D - chrX_9_20500001 chrX_20500001 D4-c1 2583 chrX 20528620 20528631 chrX 20528969 20528980 6 349 1.5 3.5 2.5 1.7 360 chrX 20528620 intergenic not near genes chrX 20528800 intergenic not near genes chrX 20528980 intergenic not near genes chrX_6_20525001 chrX_20525001 D4-c1 2584 chrX 20531767 20531774 chrX 20531867 20531874 4 100 1.5 3.0 2.2 1.2 107 chrX 20531767 intergenic not near genes chrX 20531820 intergenic not near genes chrX 20531874 intergenic not near genes chrX_4_20530001 chrX_20530001 D4-c1 2585 chrX 20546555 20546565 chrX 20546722 20546732 4 167 2.5 1.0 1.8 1.4 177 chrX 20546555 intron RunxB + chrX 20546644 intron RunxB + chrX 20546732 intron RunxB + chrX_4_20545001 chrX_20545001 D4-c1 2586 chrX 20572773 20572802 chrX 20573074 20573103 6 301 1.5 1.0 1.2 2.7 330 chrX 20572773 intergenic not near genes chrX 20572938 intergenic not near genes chrX 20573103 intergenic not near genes chrX_6_20570001 chrX_20570001 D4-c1 2587 chrX 20634428 20634439 chrX 20634514 20634525 4 86 2.5 3.0 2.8 1.1 97 chrX 20634428 intergenic not near genes chrX 20634476 intergenic not near genes chrX 20634525 intergenic not near genes chrX_4_20630001 chrX_20630001 D4-c1 2588 chrX 20662321 20662328 chrX 20662405 20662412 4 84 5.5 0.0 2.8 1.1 91 chrX 20662321 intron CG1835 + chrX 20662366 intron CG1835 + chrX 20662412 intron CG1835 + chrX_4_20660001 chrX_20660001 D4-c1 2589 chrX 20710411 20710431 chrX 20710489 20710509 5 78 1.0 3.0 2.0 1.7 98 chrX 20710411 intergenic not near genes chrX 20710460 intergenic not near genes chrX 20710509 intergenic not near genes chrX_5_20710001 chrX_20710001 D4-c1 2590 chrX 20780228 20780238 chrX 20780454 20780464 4 226 2.0 4.0 3.0 1.0 236 chrX 20780228 intron,3` UTR shakB -,CG32507 - chrX 20780346 intron,3` UTR shakB -,CG32507 - chrX 20780464 intron,3` UTR shakB -,CG32507 - chrX_4_20780001 chrX_20780001 D4-c1 2591 chrX 20791556 20791572 chrX 20791657 20791673 7 101 3.5 1.0 2.2 2.2 117 chrX 20791556 intron shakB - chrX 20791614 intron shakB - chrX 20791673 intron shakB - chrX_7_20790001 chrX_20790001 D4-c1 2592 chrX 20836724 20836758 chrX 20844327 20844361 roo 6 7603 2.5 2.0 2.2 1.9 7637 chrX 20836724 intron shakB - chrX 20840542 intron shakB - chrX 20844361 intron shakB - chrX_6_20840001 chrX_20840001 D4-c1 2593 chrX 20940718 20940746 chrX 20942188 20942216 hobo 6 1470 3.5 1.5 2.5 1.7 1498 chrX 20940718 intergenic not near genes chrX 20941467 intergenic not near genes chrX 20942216 intergenic not near genes chrX_6_20940001 chrX_20940001 D4-c1 2594 chrX 20981033 20981058 chrX 20981137 20981162 7 104 1.0 0.5 0.8 3.9 129 chrX 20981033 intergenic not near genes chrX 20981098 intergenic not near genes chrX 20981162 intergenic not near genes chrX_7_20980001 chrX_20980001 D4-c1 2595 chrX 21029796 21029812 chrX 21029938 21029954 4 142 2.0 4.0 3.0 1.0 158 chrX 21029796 3` UTR CG1529 - chrX 21029875 3` UTR CG1529 - chrX 21029954 3` UTR CG1529 - chrX_4_21025001 chrX_21025001 D4-c1 2596 chrX 21040457 21040472 chrX 21045374 21045389 4 4918 20.5 21.0 20.8 0.2 4932 chrX 21040457 3` UTR,5` UTR Ntf-2 +,CG15449 - chrX 21042923 intron Mgstl + chrX 21045389 intron Cbs + chrX_4_21040001 chrX_21040001 D4-c1 2597 chrX 21061880 21061895 chrX 21062367 21062382 roo 4 487 0.5 4.0 2.2 1.2 502 chrX 21061880 intron bves + chrX 21062131 intron bves + chrX 21062382 intron,3` UTR bves +,CG32512 - chrX_4_21060001 chrX_21060001 D4-c1 2598 chrX 21076329 21076356 chrX 21076409 21076436 6 80 1.5 1.0 1.2 2.7 107 chrX 21076329 intron bves + chrX 21076382 intron bves + chrX 21076436 intron bves + chrX_6_21075001 chrX_21075001 D4-c1 2599 chrX 21086138 21086162 chrX 21087168 21087192 jockey 4 1030 0.5 2.5 1.5 1.6 1054 chrX 21086138 intergenic not near genes chrX 21086665 intergenic not near genes chrX 21087192 intergenic not near genes chrX_4_21085001 chrX_21085001 D4-c1 2600 chrX 21088039 21088074 chrX 21088172 21088207 8 133 1.5 2.5 2.0 2.7 168 chrX 21088039 intergenic not near genes chrX 21088123 intergenic not near genes chrX 21088207 intergenic not near genes chrX_8_21085001 chrX_21085001 D4-c1 2601 chrX 21197055 21197087 chrX 21197134 21197166 7 79 0.5 3.0 1.8 2.5 111 chrX 21197055 intergenic not near genes chrX 21197110 intergenic not near genes chrX 21197166 intergenic not near genes chrX_7_21195001 chrX_21195001 D4-c1 2602 chrX 21253283 21253307 chrX 21253361 21253385 10 78 4.5 1.5 3.0 2.5 102 chrX 21253283 intron CG32521 - chrX 21253334 intron CG32521 - chrX 21253385 intron CG32521 - chrX_10_21250001 chrX_21250001 D4-c1 2603 chrX 21255495 21255511 chrX 21255622 21255638 5 127 2.5 0.0 1.2 2.3 143 chrX 21255495 intron CG32521 - chrX 21255566 intron CG32521 - chrX 21255638 intron CG32521 - chrX_5_21255001 chrX_21255001 D4-c1 2604 chrX 21270352 21270375 chrX 21270443 21270466 10 90 4.5 2.0 3.2 2.4 114 chrX 21270352 intron CG32521 - chrX 21270409 intron CG32521 - chrX 21270466 intron CG32521 - chrX_10_21270001 chrX_21270001 D4-c1 2605 chrX 21275165 21275192 chrX 21275244 21275271 5 79 2.0 1.5 1.8 1.8 106 chrX 21275165 intron CG32521 - chrX 21275218 intron CG32521 - chrX 21275271 intron CG32521 - chrX_5_21275001 chrX_21275001 D4-c1 2606 chrX 21328117 21328134 chrX 21328229 21328246 5 112 2.0 0.5 1.2 2.3 129 chrX 21328117 3` UTR CG1486 + chrX 21328182 intergenic CG1486 +,tty - chrX 21328246 intergenic CG1486 +,tty - chrX_5_21325001 chrX_21325001 D4-c1 2607 chrX 21398880 21398912 chrX 21398958 21398990 8 78 3.0 3.0 3.0 2.0 110 chrX 21398880 intergenic not near genes chrX 21398935 intergenic not near genes chrX 21398990 intergenic not near genes chrX_8_21395001 chrX_21395001 D4-c1 2608 chrX 21410657 21410674 chrX 21410737 21410754 4 80 0.0 2.0 1.0 2.0 97 chrX 21410657 intergenic CR45003 - chrX 21410706 intergenic CR45003 - chrX 21410754 intergenic CR45003 - chrX_4_21410001 chrX_21410001 D4-c1 2609 chrX 21419207 21419236 chrX 21419293 21419322 5 86 2.5 3.0 2.8 1.3 115 chrX 21419207 intergenic not near genes chrX 21419264 intergenic not near genes chrX 21419322 intergenic not near genes chrX_5_21415001 chrX_21415001 D4-c1 2610 chrX 21452747 21452762 chrX 21452829 21452844 5 82 0.0 1.5 0.8 2.8 97 chrX 21452747 intron CG42343 - chrX 21452796 intron CG42343 - chrX 21452844 intron CG42343 - chrX_5_21450001 chrX_21450001 D4-c1 2611 chrX 21455217 21455245 chrX 21455397 21455433 5 183 0.0 0.0 0.0 5.0 216 chrX 21455217 intron CG42343 - chrX 21455325 intron CG42343 - chrX 21455433 intron CG42343 - chrX_5_21455001 chrX_21455001 D4-c1 2612 chrX 21458692 21458724 chrX 21464129 21464161 Ivk 10 5437 1.5 4.0 2.8 2.6 5469 chrX 21458692 intergenic not near genes chrX 21461426 intergenic not near genes chrX 21464161 intergenic not near genes chrX_10_21460001 chrX_21460001 D4-c1 2613 chrX 21474408 21474433 chrX 21474775 21474800 1731 7 367 2.5 4.0 3.2 1.7 392 chrX 21474408 intergenic not near genes chrX 21474604 intergenic not near genes chrX 21474800 intergenic not near genes chrX_7_21470001 chrX_21470001 D4-c1 2614 chrX 21507319 21507353 chrX 21507410 21507444 12 91 2.0 2.5 2.2 3.8 125 chrX 21507319 intron CR45082 - chrX 21507382 intron CR45082 - chrX 21507444 intron CR45082 - chrX_12_21505001 chrX_21505001 D4-c1 2615 chrX 21668254 21668282 chrX 21668340 21668368 8 86 31.5 28.5 30.0 0.3 114 chrX 21668254 intergenic not near genes chrX 21668311 intergenic not near genes chrX 21668368 intergenic not near genes chrX_8_21665001 chrX_21665001 D4-c1 2616 chrX 22522635 22522655 chrX 22525456 22525476 NOF 7 2821 2.5 4.5 3.5 1.6 2841 chrX 22522635 intron CG17600 + chrX 22524056 intron CG17600 + chrX 22525476 intron CG17600 + chrX_7_22520001 chrX_22520001 D4-c1 2617 chrX 22596944 22596964 chrX 22597326 22597346 4 382 3.5 2.0 2.8 1.1 402 chrX 22596944 intron Cda4 - chrX 22597145 intron Cda4 - chrX 22597346 intron Cda4 - chrX_4_22595001 chrX_22595001 D4-c1 2618 chrX 22660566 22660597 chrX 22660651 22660674 9 83 2.5 0.0 1.2 4.1 108 chrX 22660566 intron CR44997 + chrX 22660620 intron CR44997 + chrX 22660674 intron CR44997 + chrX_9_22660001 chrX_22660001 D4-c1 2619 chrX 22697024 22697052 chrX 22697141 22697169 12 117 2.5 5.0 3.8 2.5 145 chrX 22697024 intron CR44997 + chrX 22697096 intron CR44997 + chrX 22697169 intron CR44997 + chrX_12_22695001 chrX_22695001 D4-c1 2620 chrX 22697495 22697521 chrX 22701791 22701819 Juan 9 4298 4.0 3.5 3.8 1.9 4324 chrX 22697495 intron CR44997 + chrX 22699657 intron CR44997 + chrX 22701819 intron CR44997 + chrX_9_22695001 chrX_22695001 D4-c1 2621 chrX 22771510 22771539 chrX 22774802 22774831 297 11 3292 3.0 2.0 2.5 3.1 3321 chrX 22771510 intron CR44997 + chrX 22773170 intron CR44997 + chrX 22774831 intron CR44997 + chrX_11_22770001 chrX_22770001 D4-c1 2622 chrX 22784078 22784100 chrX 22784162 22784184 4 84 3.0 2.0 2.5 1.1 106 chrX 22784078 intron CR44997 + chrX 22784131 intron CR44997 + chrX 22784184 intron CR44997 + chrX_4_22780001 chrX_22780001 D4-c1 2623 chrX 22797011 22797025 chrX 22797097 22797111 7 85 0.0 7.0 3.5 1.6 100 chrX 22797011 intron CR44997 + chrX 22797061 intron CR44997 + chrX 22797111 intron CR44997 + chrX_7_22795001 chrX_22795001 D4-c1 2624 chrX 22811991 22812005 chrX 22816764 22816778 F-element 5 4773 6.0 4.0 5.0 0.8 4787 chrX 22811991 intergenic CG12446 - chrX 22814384 intergenic not near genes chrX 22816778 intergenic not near genes chrX_5_22810001 chrX_22810001 D4-c1 2625 chrX 22824246 22824449 chrX 22824373 22824583 15 133 1.5 5.0 3.2 3.6 337 chrX 22824246 intergenic fog - chrX 22824414 3` UTR fog - chrX 22824583 3` UTR fog - chrX_15_22820001 chrX_22820001 D4-c1 2626 chrX 22870878 22870899 chrX 22870970 22870990 8 92 2.5 5.0 3.8 1.7 112 chrX 22870878 intron,3` UTR CG42346 +,CR43656 - chrX 22870934 intron,3` UTR CG42346 +,CR43656 - chrX 22870990 intron,3` UTR CG42346 +,CR43656 - chrX_8_22870001 chrX_22870001 D4-c1 2627 chrX 22895726 22895759 chrX 22895845 22895878 14 119 3.0 2.0 2.5 4.0 152 chrX 22895726 intergenic not near genes chrX 22895802 intergenic not near genes chrX 22895878 intergenic not near genes chrX_14_22895001 chrX_22895001 D4-c1 2628 chrX 22908987 22908993 chrX 22913213 22913219 Burdock 5 4226 1.5 0.0 0.8 2.8 4232 chrX 22908987 intergenic not near genes chrX 22911103 intergenic not near genes chrX 22913219 intergenic not near genes chrX_5_22910001 chrX_22910001 D4-c1 2629 chrX 22992391 22992413 chrX 22992523 22992545 9 132 4.0 0.5 2.2 2.8 154 chrX 22992391 intron,intron stnA -,stnB - chrX 22992468 intron,intron stnA -,stnB - chrX 22992545 intron,intron stnA -,stnB - chrX_9_22990001 chrX_22990001 D4-c1 2630 chrY 311341 311345 chrY 311459 311463 4 118 1.0 0.0 0.5 2.7 122 chrY 311341 intergenic not near genes chrY 311402 intergenic not near genes chrY 311463 intergenic not near genes chrY_4_310001 chrY_310001 D4-c1 2631 chrY 1419902 1419931 chrY 1420157 1420186 8 255 11.5 6.5 9.0 0.8 284 chrY 1419902 intergenic not near genes chrY 1420044 intergenic not near genes chrY 1420186 intergenic not near genes chrY_8_1420001 chrY_1420001 D4-c1 2632 chrY 1431368 1431373 chrY 1447405 1447410 Doc 4 16036 9.5 5.0 7.2 0.5 16042 chrY 1431368 intergenic not near genes chrY 1439389 intergenic not near genes chrY 1447410 intergenic not near genes chrY_4_1435001 chrY_1435001 D4-c1