SV#	Chr	Chr_coord_5p	Chr_coord_3p	TE	TE_coord_start	TE_coord_end	Reads_collapsed	Chr_Coord_Dist	Symmetry	avg_blat_score	Norm_RefGen_Reads	Coverage_Ratio	classification	comments	insert_code	loci_code	Sym_score	libname
1	chr2L	90426	90496	copia	248	4874	4	70	'3-1	62.50	10.3	0.4	intergenic	not near genes	chr2L_4_90001	chr2L_90001	0.75	D20-c2
2	chr2L	137492	137563	297	5	386	9	71	'4-5	65.35	9.9	0.8	intron	CG11455 +	chr2L_9_135001	chr2L_135001	0.44	D20-c2
3	chr2L	223604	223686	copia	2	257	7	82	'3-4	61.30	11.0	0.6	intron,5` UTR	kis -,CR44222 +	chr2L_7_220001	chr2L_220001	0.43	D20-c2
4	chr2L	309558	309581	297	2	20	5	23	'3-2	67.75	15.3	0.3	intron	Plc21C +	chr2L_5_305001	chr2L_305001	0.60	D20-c2
5	chr2L	435509	435571	copia	3	238	11	62	'9-2	62.10	12.7	0.8	intron	ex +	chr2L_11_435001	chr2L_435001	0.82	D20-c2
6	chr2L	442231	442311	blood	7014	378	17	80	'6-11	65.53	11.8	1.3	intron	ex +	chr2L_17_440001	chr2L_440001	0.35	D20-c2
7	chr2L	468824	468900	mdg3	5256	5495	15	76	'11-4	65.13	9.4	1.4	intron	CG4297 -	chr2L_15_465001	chr2L_465001	0.73	D20-c2
8	chr2L	469189	469267	297	3	392	4	78	'3-1	72.92	14.0	0.3	intron	CG4297 -	chr2L_4_465001	chr2L_465001	0.75	D20-c2
9	chr2L	527327	527408	297	3	394	5	81	'2-3	66.84	15.9	0.3	intron	ush +	chr2L_5_525001	chr2L_525001	0.40	D20-c2
10	chr2L	763760	763839	mdg1	7459	4	17	79	'13-4	62.29	11.2	1.4	intergenic	not near genes	chr2L_17_760001	chr2L_760001	0.76	D20-c2
11	chr2L	774174	774235	jockey	4986	4766	9	61	'2-7	59.36	11.6	0.7	intergenic	CG12506 +	chr2L_9_770001	chr2L_770001	0.22	D20-c2
12	chr2L	788838	788912	297	6582	6966	8	74	'7-1	65.30	7.1	1.0	intron	Pkg21D -	chr2L_8_785001	chr2L_785001	0.88	D20-c2
13	chr2L	867683	867760	S-element	1711	1712	7	77	'2-5	65.75	7.2	0.9	intron	aru -	chr2L_7_865001	chr2L_865001	0.29	D20-c2
14	chr2L	904651	904733	412	2	494	39	82	'18-21	66.33	15.4	2.4	intergenic	CR45261 +	chr2L_39_900001	chr2L_900001	0.46	D20-c2
15	chr2L	909118	909182	mdg1	406	4	6	64	'1-5	60.97	10.3	0.5	intergenic	not near genes	chr2L_6_905001	chr2L_905001	0.17	D20-c2
16	chr2L	940605	940686	roo	8664	407	41	81	'23-18	67.30	9.7	3.8	intron	CG4341 +	chr2L_41_940001	chr2L_940001	0.56	D20-c2
17	chr2L	1207146	1207177	Doc	8	4	8	31	'4-4	68.10	18.9	0.4	intergenic	not near genes	chr2L_8_1205001	chr2L_1205001	0.50	D20-c2
18	chr2L	1304547	1304623	mdg3	5261	248	4	76	'2-2	64.66	15.9	0.2	intergenic	not near genes	chr2L_4_1300001	chr2L_1300001	0.50	D20-c2
19	chr2L	1346431	1346472	I-element	5336	11	6	41	'3-3	60.74	3.0	1.5	intergenic	CR45006 -	chr2L_6_1345001	chr2L_1345001	0.50	D20-c2
20	chr2L	1399143	1399219	micropia	4962	454	9	76	'6-3	70.76	9.4	0.9	intron	lea -	chr2L_9_1395001	chr2L_1395001	0.67	D20-c2
21	chr2L	1403598	1403664	297	6583	378	6	66	'3-3	71.05	12.0	0.5	intron	lea -	chr2L_6_1400001	chr2L_1400001	0.50	D20-c2
22	chr2L	1406007	1406088	17.6	7418	2	8	81	'7-1	66.94	9.2	0.8	intron	lea -	chr2L_8_1405001	chr2L_1405001	0.88	D20-c2
23	chr2L	1483696	1483780	diver	226	5888	10	84	'6-4	65.00	7.1	1.2	intergenic	not near genes	chr2L_10_1480001	chr2L_1480001	0.60	D20-c2
24	chr2L	1666175	1666223	rover	15	326	4	48	'3-1	67.77	8.2	0.4	intron	chinmo +	chr2L_4_1665001	chr2L_1665001	0.75	D20-c2
25	chr2L	1693598	1693661	rover	7291	6963	4	63	'2-2	60.53	3.1	1.0	intron	chinmo +	chr2L_4_1690001	chr2L_1690001	0.50	D20-c2
26	chr2L	1698846	1698924	297	387	6580	10	78	'6-4	69.78	8.6	1.0	3` UTR	chinmo +	chr2L_10_1695001	chr2L_1695001	0.60	D20-c2
27	chr2L	1720882	1720902	297	6599	6580	4	20	'2-2	64.67	4.9	0.7	intron	Rim2 -	chr2L_4_1720001	chr2L_1720001	0.50	D20-c2
28	chr2L	1886054	1886127	412	494	11	25	73	'16-9	62.59	6.1	3.5	intron	CG7337 +	chr2L_25_1885001	chr2L_1885001	0.64	D20-c2
29	chr2L	2020555	2020640	roo	8664	411	25	85	'15-10	69.51	3.8	5.2	intron	CG4238 +	chr2L_25_2020001	chr2L_2020001	0.60	D20-c2
30	chr2L	2120919	2120975	297	6604	6971	5	56	'1-4	66.86	10.1	0.5	intergenic	not near genes	chr2L_5_2120001	chr2L_2120001	0.20	D20-c2
31	chr2L	2432000	2432024	297	394	6952	7	24	'3-4	63.86	7.7	0.8	intron	dpp +	chr2L_7_2430001	chr2L_2430001	0.43	D20-c2
32	chr2L	2621554	2621581	BS	5067	5040	6	27	'4-2	59.65	1.5	2.4	intergenic	not near genes	chr2L_6_2620001	chr2L_2620001	0.67	D20-c2
33	chr2L	2632544	2632622	blood	378	3	11	78	'7-4	63.12	7.1	1.4	intergenic	not near genes	chr2L_11_2630001	chr2L_2630001	0.64	D20-c2
34	chr2L	2697470	2697498	roo	29	8665	8	28	'4-4	62.17	7.9	0.9	intron	CG31690 +	chr2L_8_2695001	chr2L_2695001	0.50	D20-c2
35	chr2L	2898141	2898198	copia	252	4891	7	57	'4-3	63.50	7.1	0.9	intron	lilli +	chr2L_7_2895001	chr2L_2895001	0.57	D20-c2
36	chr2L	2933294	2933309	rover	338	7274	5	15	'2-3	64.21	12.2	0.4	intron	lilli +	chr2L_5_2930001	chr2L_2930001	0.40	D20-c2
37	chr2L	3122311	3122383	297	6592	395	4	72	'2-2	71.71	4.1	0.8	intron	toc -	chr2L_4_3120001	chr2L_3120001	0.50	D20-c2
38	chr2L	3233658	3233723	412	485	10	12	65	'6-6	61.73	6.3	1.6	intergenic	not near genes	chr2L_12_3230001	chr2L_3230001	0.50	D20-c2
39	chr2L	3343746	3343820	3S18	6097	5765	13	74	'4-9	65.99	8.2	1.4	intron	E23 -	chr2L_13_3340001	chr2L_3340001	0.31	D20-c2
40	chr2L	3415930	3416011	micropia	5440	2	16	81	'4-12	67.10	8.8	1.6	intron	pgant2 -	chr2L_16_3415001	chr2L_3415001	0.25	D20-c2
41	chr2L	3440475	3440505	Juan	35	5	8	30	'1-7	60.36	8.2	0.9	intergenic	not near genes	chr2L_8_3440001	chr2L_3440001	0.12	D20-c2
42	chr2L	3572258	3572337	micropia	458	4963	11	79	'3-8	62.39	5.9	1.6	intergenic	not near genes	chr2L_11_3570001	chr2L_3570001	0.27	D20-c2
43	chr2L	3574921	3574994	copia	5	251	6	73	'5-1	64.91	5.6	0.9	intergenic	CR43822 +	chr2L_6_3570001	chr2L_3570001	0.83	D20-c2
44	chr2L	3647903	3647979	297	8	394	9	76	'4-5	72.04	3.8	1.9	intron	for -	chr2L_9_3645001	chr2L_3645001	0.44	D20-c2
45	chr2L	3732820	3732836	F-element	37	21	7	16	'1-6	59.17	13.8	0.5	intron	CG10019 +	chr2L_7_3730001	chr2L_3730001	0.14	D20-c2
46	chr2L	3770847	3770903	297	367	6582	4	56	'1-3	70.06	6.6	0.5	intergenic	CR43704 -	chr2L_4_3770001	chr2L_3770001	0.25	D20-c2
47	chr2L	3938207	3938291	412	18	494	7	84	'3-4	58.76	3.1	1.7	intron	fred -	chr2L_7_3935001	chr2L_3935001	0.43	D20-c2
48	chr2L	3960854	3960939	opus	7499	110	16	85	'10-6	67.63	5.6	2.4	intron	fred -	chr2L_16_3960001	chr2L_3960001	0.62	D20-c2
49	chr2L	3999143	3999208	roo	410	8683	12	65	'10-2	66.01	6.0	1.7	intergenic	not near genes	chr2L_12_3995001	chr2L_3995001	0.83	D20-c2
50	chr2L	4870397	4870484	roo	410	8662	27	87	'13-14	65.80	5.9	3.9	intron	pog +	chr2L_27_4870001	chr2L_4870001	0.48	D20-c2
51	chr2L	4914862	4914923	3S18	325	5771	6	61	'1-5	59.65	10.7	0.5	intron	hoe1 -	chr2L_6_4910001	chr2L_4910001	0.17	D20-c2
52	chr2L	4917908	4917981	rover	6953	7295	4	73	'3-1	64.80	3.8	0.8	intron	hoe1 -	chr2L_4_4915001	chr2L_4915001	0.75	D20-c2
53	chr2L	4929479	4929558	297	6583	6972	6	79	'4-2	70.08	6.3	0.8	intron	hoe1 -	chr2L_6_4925001	chr2L_4925001	0.67	D20-c2
54	chr2L	4951066	4951128	pogo	15	2092	8	62	'3-5	65.30	2.5	2.3	intergenic	Jon25Biii -	chr2L_8_4950001	chr2L_4950001	0.38	D20-c2
55	chr2L	5146375	5146460	297	6580	394	8	85	'3-5	70.62	5.0	1.3	intron	Msp300 +	chr2L_8_5145001	chr2L_5145001	0.38	D20-c2
56	chr2L	5211412	5211433	F-element	33	12	9	21	'3-6	55.86	27.6	0.3	exon	Cyp28d1 +	chr2L_9_5210001	chr2L_5210001	0.33	D20-c2
57	chr2L	5664639	5664701	mdg3	24	249	5	62	'1-4	67.10	6.5	0.7	intron	Hsp60C +	chr2L_5_5660001	chr2L_5660001	0.20	D20-c2
58	chr2L	5711873	5711953	412	495	5	15	80	'10-5	65.26	4.5	2.7	intron	CG7236 +	chr2L_15_5710001	chr2L_5710001	0.67	D20-c2
59	chr2L	6004625	6004650	Doc	7	32	6	25	'3-3	61.74	16.2	0.3	exon,5` UTR	Gal -,CR43866 +	chr2L_6_6000001	chr2L_6000001	0.50	D20-c2
60	chr2L	6180549	6180610	copia	233	4868	6	61	'3-3	69.69	8.6	0.6	intron	CG34380 +	chr2L_6_6180001	chr2L_6180001	0.50	D20-c2
61	chr2L	6190161	6190241	mdg3	5256	247	7	80	'3-4	66.18	8.2	0.8	intron	CG34380 +	chr2L_7_6190001	chr2L_6190001	0.43	D20-c2
62	chr2L	6292988	6293007	F-element	328	347	12	19	'4-8	55.15	9.3	1.2	intron	Ddr +	chr2L_12_6290001	chr2L_6290001	0.33	D20-c2
63	chr2L	6296704	6296772	TART-A	13147	13148	4	68	'3-1	72.70	3.6	0.9	exon	Ddr +	chr2L_4_6295001	chr2L_6295001	0.75	D20-c2
64	chr2L	6341514	6341543	mdg3	5285	5256	7	29	'4-3	69.48	6.3	1.0	intron	Cpr +	chr2L_7_6340001	chr2L_6340001	0.57	D20-c2
65	chr2L	6362930	6363009	micropia	3	454	12	79	'7-5	68.25	5.1	2.0	intergenic	not near genes	chr2L_12_6360001	chr2L_6360001	0.58	D20-c2
66	chr2L	6464839	6464921	297	6580	6972	4	82	'2-2	68.63	4.7	0.7	intron	CG16947 -	chr2L_4_6460001	chr2L_6460001	0.50	D20-c2
67	chr2L	6569243	6569276	412	461	494	5	33	'1-4	65.26	4.3	0.9	3` UTR	CG11319 -	chr2L_5_6565001	chr2L_6565001	0.20	D20-c2
68	chr2L	7003683	7003744	mdg3	236	5264	5	61	'2-3	63.95	3.2	1.2	intron	uif -	chr2L_5_7000001	chr2L_7000001	0.40	D20-c2
69	chr2L	7060747	7060823	micropia	5	5437	8	76	'6-2	57.90	3.9	1.6	intron,5` UTR	Mnn1 +,CG31907 -	chr2L_8_7060001	chr2L_7060001	0.75	D20-c2
70	chr2L	7115816	7115892	mdg3	249	5262	12	76	'7-5	61.30	3.3	2.8	intron	Pvf3 -	chr2L_12_7115001	chr2L_7115001	0.58	D20-c2
71	chr2L	7213080	7213146	297	6587	382	7	66	'3-4	64.32	3.4	1.6	intron	CG13784 -	chr2L_7_7210001	chr2L_7210001	0.43	D20-c2
72	chr2L	7326059	7326133	micropia	457	4965	4	74	'3-1	64.82	2.8	1.1	intergenic	not near genes	chr2L_4_7325001	chr2L_7325001	0.75	D20-c2
73	chr2L	7367069	7367151	roo	8663	407	21	82	'7-14	63.54	4.1	4.1	intron	Wnt10 +	chr2L_21_7365001	chr2L_7365001	0.33	D20-c2
74	chr2L	7424725	7424804	297	6580	6963	4	79	'2-2	67.21	2.8	1.1	intron	CR43857 +	chr2L_4_7420001	chr2L_7420001	0.50	D20-c2
75	chr2L	7447947	7448030	297	392	6580	8	83	'3-5	70.39	2.8	2.1	5` UTR	santa-maria -	chr2L_8_7445001	chr2L_7445001	0.38	D20-c2
76	chr2L	7450682	7450750	297	6970	6592	5	68	'3-2	68.16	5.6	0.8	5` UTR	santa-maria -	chr2L_5_7450001	chr2L_7450001	0.60	D20-c2
77	chr2L	7489560	7489618	pogo	2094	21	16	58	'11-5	66.99	5.0	2.7	intron	Ziz -	chr2L_16_7485001	chr2L_7485001	0.69	D20-c2
78	chr2L	7577328	7577349	jockey	37	16	10	21	'4-6	56.10	4.4	1.9	intron	RapGAP1 -	chr2L_10_7575001	chr2L_7575001	0.40	D20-c2
79	chr2L	7726118	7726195	297	6974	6587	8	77	'4-4	65.36	4.0	1.6	5` UTR	CG13795 -	chr2L_8_7725001	chr2L_7725001	0.50	D20-c2
80	chr2L	7728217	7728450	mdg3	5258	348	14	233	'3-11	60.24	3.9	2.9	exon	CG13796 -	chr2L_14_7725001	chr2L_7725001	0.21	D20-c2
81	chr2L	7835251	7835337	297	395	3	6	86	'3-3	66.01	5.0	1.0	intergenic	not near genes	chr2L_6_7835001	chr2L_7835001	0.50	D20-c2
82	chr2L	7891426	7891504	297	7	395	8	78	'3-5	63.16	3.7	1.7	3` UTR	Snoo -	chr2L_8_7890001	chr2L_7890001	0.38	D20-c2
83	chr2L	7976225	7976284	copia	248	16	6	59	'3-3	62.94	7.3	0.7	5` UTR	Snoo -	chr2L_6_7975001	chr2L_7975001	0.50	D20-c2
84	chr2L	8089905	8089985	297	394	6585	9	80	'4-5	64.91	5.7	1.3	intron	Bsg +	chr2L_9_8085001	chr2L_8085001	0.44	D20-c2
85	chr2L	8115245	8115318	297	6584	6967	4	73	'1-3	68.42	2.7	1.1	3` UTR	Bsg +	chr2L_4_8115001	chr2L_8115001	0.25	D20-c2
86	chr2L	8164137	8164204	297	6972	14	4	67	'2-2	61.71	4.3	0.8	intron	Piezo +	chr2L_4_8160001	chr2L_8160001	0.50	D20-c2
87	chr2L	8289985	8290063	297	6581	388	7	78	'3-4	75.52	5.2	1.1	intron	Btk29A -	chr2L_7_8285001	chr2L_8285001	0.43	D20-c2
88	chr2L	8324714	8324742	rover	7271	348	6	28	'2-4	71.27	5.9	0.9	intron	CG7781 -	chr2L_6_8320001	chr2L_8320001	0.33	D20-c2
89	chr2L	8328870	8328893	roo	386	409	9	23	'5-4	62.72	5.5	1.4	intron	CG14275 +	chr2L_9_8325001	chr2L_8325001	0.56	D20-c2
90	chr2L	8355834	8355923	roo	411	8660	26	89	'9-17	65.89	6.0	3.7	3` UTR	CG7627 -	chr2L_26_8355001	chr2L_8355001	0.35	D20-c2
91	chr2L	8433708	8433774	jockey	4980	4674	15	66	'8-7	59.72	2.9	3.8	intergenic	grk -,D12 -	chr2L_15_8430001	chr2L_8430001	0.53	D20-c2
92	chr2L	8472062	8472141	roo	2	9070	19	79	'4-15	65.79	5.3	3.0	intron	d +	chr2L_19_8470001	chr2L_8470001	0.21	D20-c2
93	chr2L	8523235	8523311	micropia	5438	4	8	76	'1-7	64.19	5.2	1.3	intron	Acer +	chr2L_8_8520001	chr2L_8520001	0.12	D20-c2
94	chr2L	8694013	8694078	297	6588	6963	4	65	'2-2	68.42	4.3	0.8	intron	Hnf4 -	chr2L_4_8690001	chr2L_8690001	0.50	D20-c2
95	chr2L	8808109	8808136	jockey	4741	4714	7	27	'2-5	59.59	6.3	1.0	intergenic	not near genes	chr2L_7_8805001	chr2L_8805001	0.29	D20-c2
96	chr2L	8932690	8932770	mdg3	5256	247	10	80	'6-4	70.71	5.8	1.5	intron	CG34398 +	chr2L_10_8930001	chr2L_8930001	0.60	D20-c2
97	chr2L	8989280	8989360	297	395	5	8	80	'4-4	67.44	3.2	1.9	intron	rost -	chr2L_8_8985001	chr2L_8985001	0.50	D20-c2
98	chr2L	8992619	8992699	pogo	3	2098	13	80	'5-8	63.12	1.9	4.5	intron	CG9555 +	chr2L_13_8990001	chr2L_8990001	0.38	D20-c2
99	chr2L	9036169	9036207	jockey	4664	4702	12	38	'7-5	67.50	5.4	1.9	intergenic	not near genes	chr2L_12_9035001	chr2L_9035001	0.58	D20-c2
100	chr2L	9365619	9365699	roo	404	8663	22	80	'8-14	70.67	3.5	4.9	intergenic	not near genes	chr2L_22_9365001	chr2L_9365001	0.36	D20-c2
101	chr2L	9386756	9386787	jockey	4720	4687	6	31	'4-2	63.70	2.2	1.9	intron	Shawl -	chr2L_6_9385001	chr2L_9385001	0.67	D20-c2
102	chr2L	9500340	9500415	297	6968	2	6	75	'3-3	64.26	4.9	1.0	intron	CG33298 +	chr2L_6_9500001	chr2L_9500001	0.50	D20-c2
103	chr2L	9615082	9615153	micropia	9	452	9	71	'7-2	64.47	8.6	0.9	intron	Trx-2 +	chr2L_9_9615001	chr2L_9615001	0.78	D20-c2
104	chr2L	9670211	9670267	297	2	6949	8	56	'6-2	67.04	5.9	1.2	3` UTR	CR44150 -	chr2L_8_9670001	chr2L_9670001	0.75	D20-c2
105	chr2L	9683848	9683894	17.6	7394	6940	7	46	'2-5	67.67	4.8	1.2	3` UTR	Pka-C1 -	chr2L_7_9680001	chr2L_9680001	0.29	D20-c2
106	chr2L	9688399	9688479	297	6582	6972	4	80	'2-2	65.99	5.5	0.6	intron	Pka-C1 -	chr2L_4_9685001	chr2L_9685001	0.50	D20-c2
107	chr2L	9771348	9771429	diver	224	1	10	81	'7-3	67.37	7.8	1.1	exon	ppk16 -	chr2L_10_9770001	chr2L_9770001	0.70	D20-c2
108	chr2L	9954278	9954333	297	6948	6583	5	55	'1-4	66.05	1.7	1.9	intergenic	CG4709 +,CG13126 -	chr2L_5_9950001	chr2L_9950001	0.20	D20-c2
109	chr2L	10506514	10506536	297	22	6581	7	22	'2-5	64.48	9.0	0.7	intron,5` UTR	Myo31DF -,CR44224 +	chr2L_7_10505001	chr2L_10505001	0.29	D20-c2
110	chr2L	10560314	10560386	rover	6956	340	4	72	'2-2	57.55	5.8	0.6	intron	Trim9 +	chr2L_4_10560001	chr2L_10560001	0.50	D20-c2
111	chr2L	10885875	10885955	roo	409	3	18	80	'10-8	64.73	2.8	4.7	intergenic	not near genes	chr2L_18_10885001	chr2L_10885001	0.56	D20-c2
112	chr2L	10914589	10914654	mdg3	15	243	9	65	'1-8	60.71	7.5	1.1	intergenic	not near genes	chr2L_9_10910001	chr2L_10910001	0.11	D20-c2
113	chr2L	10995945	10996023	pogo	2097	4	9	78	'4-5	65.79	3.1	2.2	3` UTR	CG16833 +	chr2L_9_10995001	chr2L_10995001	0.44	D20-c2
114	chr2L	11296491	11296564	roo	1	401	15	73	'7-8	62.72	4.2	2.9	intergenic	not near genes	chr2L_15_11295001	chr2L_11295001	0.47	D20-c2
115	chr2L	11334486	11334572	roo	410	8664	24	86	'14-10	63.05	4.0	4.8	intergenic	not near genes	chr2L_24_11330001	chr2L_11330001	0.58	D20-c2
116	chr2L	11582613	11582700	opus	498	110	18	87	'15-3	65.71	6.4	2.4	5` UTR	kek2 +	chr2L_18_11580001	chr2L_11580001	0.83	D20-c2
117	chr2L	11679828	11679922	accord	7032	184	5	94	'4-1	76.88	7.3	0.6	intergenic	not near genes	chr2L_5_11675001	chr2L_11675001	0.80	D20-c2
118	chr2L	11921226	11921302	297	2	6974	5	76	'2-3	57.89	3.6	1.1	intron	Pde1c -	chr2L_5_11920001	chr2L_11920001	0.40	D20-c2
119	chr2L	11973431	11973451	micropia	4976	2	6	20	'3-3	62.13	10.5	0.5	intergenic	not near genes	chr2L_6_11970001	chr2L_11970001	0.50	D20-c2
120	chr2L	12229830	12229905	hopper	1410	3	9	75	'4-5	61.99	2.8	2.4	intron	aret +	chr2L_9_12225001	chr2L_12225001	0.44	D20-c2
121	chr2L	12265713	12265775	297	6581	373	7	62	'5-2	70.81	3.9	1.4	intron	aret +	chr2L_7_12265001	chr2L_12265001	0.71	D20-c2
122	chr2L	12461445	12461515	297	1	19	5	70	'2-3	67.22	5.6	0.8	intron	bun -	chr2L_5_12460001	chr2L_12460001	0.40	D20-c2
123	chr2L	12473845	12473924	copia	4868	251	11	79	'9-2	68.48	6.6	1.4	intron	bun -	chr2L_11_12470001	chr2L_12470001	0.82	D20-c2
124	chr2L	12769125	12769194	springer	7505	7136	18	69	'2-16	66.37	7.8	2.0	intergenic	not near genes	chr2L_18_12765001	chr2L_12765001	0.11	D20-c2
125	chr2L	12814628	12814704	springer	378	7139	11	76	'5-6	64.95	4.2	2.1	intergenic	not near genes	chr2L_11_12810001	chr2L_12810001	0.45	D20-c2
126	chr2L	12845274	12845357	Transpac	4919	5228	26	83	'11-15	65.54	4.1	5.1	intergenic	not near genes	chr2L_26_12845001	chr2L_12845001	0.42	D20-c2
127	chr2L	12906202	12906281	297	5	394	18	79	'5-13	65.30	7.2	2.2	intergenic	not near genes	chr2L_18_12905001	chr2L_12905001	0.28	D20-c2
128	chr2L	12923689	12923762	297	6581	390	4	73	'2-2	74.81	4.2	0.8	exon	ACXA +	chr2L_4_12920001	chr2L_12920001	0.50	D20-c2
129	chr2L	12985626	12985701	roo	9070	6	15	75	'6-9	63.86	6.6	2.0	intergenic	not near genes	chr2L_15_12985001	chr2L_12985001	0.40	D20-c2
130	chr2L	13112947	13113013	mdg1	7452	10	8	66	'6-2	61.51	6.4	1.1	intergenic	not near genes	chr2L_8_13110001	chr2L_13110001	0.75	D20-c2
131	chr2L	13182704	13182781	pogo	2098	5	10	77	'4-6	65.87	6.1	1.4	intron	CG5287 +	chr2L_10_13180001	chr2L_13180001	0.40	D20-c2
132	chr2L	13204816	13204869	297	6969	6606	5	53	'4-1	69.75	5.5	0.8	intron	Pect +	chr2L_5_13200001	chr2L_13200001	0.80	D20-c2
133	chr2L	13294418	13294491	pogo	2100	12	9	73	'7-2	68.32	5.0	1.5	intron	CG31729 +	chr2L_9_13290001	chr2L_13290001	0.78	D20-c2
134	chr2L	13480723	13480806	HMS-Beagle	247	2	14	83	'7-7	64.94	10.2	1.2	intron	CG42784 +	chr2L_14_13480001	chr2L_13480001	0.50	D20-c2
135	chr2L	13538755	13538773	297	6598	6580	7	18	'3-4	65.04	9.9	0.6	intron	B4 -	chr2L_7_13535001	chr2L_13535001	0.43	D20-c2
136	chr2L	13569218	13569304	297	386	376	4	86	'2-2	67.77	2.8	1.1	intron	kuz +	chr2L_4_13565001	chr2L_13565001	0.50	D20-c2
137	chr2L	13584856	13584929	roo	406	8672	4	73	'1-3	70.07	4.4	0.7	intron	kuz +	chr2L_4_13580001	chr2L_13580001	0.25	D20-c2
138	chr2L	13628307	13628392	Max-element	302	8234	13	85	'5-8	64.08	9.0	1.3	intron	kuz +	chr2L_13_13625001	chr2L_13625001	0.38	D20-c2
139	chr2L	13679103	13679150	Juan	4193	1	4	47	'1-3	65.46	12.0	0.3	exon	CG31814 -	chr2L_4_13675001	chr2L_13675001	0.25	D20-c2
140	chr2L	13736994	13737019	297	6949	394	4	25	'2-2	69.32	6.6	0.5	3` UTR	CG31813 +	chr2L_4_13735001	chr2L_13735001	0.50	D20-c2
141	chr2L	13963775	13963861	297	395	6580	4	86	'2-2	74.67	7.0	0.5	intron	NimB1 +	chr2L_4_13960001	chr2L_13960001	0.50	D20-c2
142	chr2L	13973794	13973864	297	6970	6587	8	70	'3-5	66.00	3.9	1.6	3` UTR	NimC1 -	chr2L_8_13970001	chr2L_13970001	0.38	D20-c2
143	chr2L	14012728	14012810	roo	407	8663	6	82	'2-4	72.97	3.7	1.3	intergenic	bgm +	chr2L_6_14010001	chr2L_14010001	0.33	D20-c2
144	chr2L	14033018	14033090	297	13	395	8	72	'2-6	66.38	6.6	1.1	3` UTR	CR45284 -	chr2L_8_14030001	chr2L_14030001	0.25	D20-c2
145	chr2L	14055840	14055909	copia	4881	254	6	69	'3-3	69.52	4.7	1.1	intron	nAChRalpha5 +	chr2L_6_14055001	chr2L_14055001	0.50	D20-c2
146	chr2L	14069990	14070067	412	1	7541	10	77	'6-4	69.08	4.6	1.8	intron	nAChRalpha5 +	chr2L_10_14065001	chr2L_14065001	0.60	D20-c2
147	chr2L	14234426	14234507	pogo	1	2097	5	81	'2-3	68.16	3.3	1.2	intergenic	Dyrk2 -,CR44727 +	chr2L_5_14230001	chr2L_14230001	0.40	D20-c2
148	chr2L	14370137	14370207	jockey	4671	4988	22	70	'11-11	60.97	5.5	3.4	intergenic	not near genes	chr2L_22_14370001	chr2L_14370001	0.50	D20-c2
149	chr2L	14524269	14524290	297	8	28	5	21	'2-3	72.32	6.5	0.7	intergenic	CG33648 +	chr2L_5_14520001	chr2L_14520001	0.40	D20-c2
150	chr2L	14542512	14542577	copia	249	4880	9	65	'4-5	68.13	4.4	1.7	intergenic	not near genes	chr2L_9_14540001	chr2L_14540001	0.44	D20-c2
151	chr2L	14546225	14546306	297	6581	395	7	81	'4-3	76.08	7.6	0.8	intergenic	not near genes	chr2L_7_14545001	chr2L_14545001	0.57	D20-c2
152	chr2L	14659673	14659735	copia	8	242	5	62	'3-2	60.26	4.6	0.9	intron	osp -	chr2L_5_14655001	chr2L_14655001	0.60	D20-c2
153	chr2L	14678613	14678676	copia	249	4882	7	63	'6-1	63.72	5.2	1.1	intron	osp -	chr2L_7_14675001	chr2L_14675001	0.86	D20-c2
154	chr2L	14685264	14685341	297	6588	394	6	77	'4-2	75.00	6.6	0.8	intron	osp -	chr2L_6_14685001	chr2L_14685001	0.67	D20-c2
155	chr2L	14699732	14699770	F-element	412	374	18	38	'10-8	65.58	10.1	1.6	intergenic	not near genes	chr2L_18_14695001	chr2L_14695001	0.56	D20-c2
156	chr2L	14700464	14700483	F-element	38	19	5	19	'2-3	64.21	2.1	1.6	intergenic	not near genes	chr2L_5_14700001	chr2L_14700001	0.40	D20-c2
157	chr2L	15124905	15124923	roo	403	385	8	18	'2-6	63.32	7.3	1.0	intergenic	not near genes	chr2L_8_15120001	chr2L_15120001	0.25	D20-c2
158	chr2L	15144290	15144370	3S18	5768	341	8	80	'6-2	69.37	6.3	1.1	intergenic	not near genes	chr2L_8_15140001	chr2L_15140001	0.75	D20-c2
159	chr2L	15287400	15287429	Doc	2	31	11	29	'5-6	63.28	7.2	1.3	intergenic	not near genes	chr2L_11_15285001	chr2L_15285001	0.45	D20-c2
160	chr2L	15501708	15501769	297	387	378	7	61	'5-2	67.48	5.4	1.1	intron	lace +	chr2L_7_15500001	chr2L_15500001	0.71	D20-c2
161	chr2L	15538827	15538844	mdg1	7055	7038	4	17	'2-2	62.17	1.5	1.6	intergenic	not near genes	chr2L_4_15535001	chr2L_15535001	0.50	D20-c2
162	chr2L	15577160	15577188	Doc	55	27	9	28	'4-5	65.42	3.2	2.1	intron	kek3 +	chr2L_9_15575001	chr2L_15575001	0.44	D20-c2
163	chr2L	15743661	15743732	pogo	14	2100	15	71	'4-11	67.96	4.1	2.9	intron	CycE -	chr2L_15_15740001	chr2L_15740001	0.27	D20-c2
164	chr2L	15817092	15817163	pogo	2097	11	19	71	'10-9	63.82	3.5	4.2	intergenic	not near genes	chr2L_19_15815001	chr2L_15815001	0.53	D20-c2
165	chr2L	15903298	15903377	Stalker2	7251	402	12	79	'7-5	62.83	3.8	2.5	intergenic	not near genes	chr2L_12_15900001	chr2L_15900001	0.58	D20-c2
166	chr2L	15927817	15927889	HMS-Beagle	241	7	22	72	'11-11	65.68	4.9	3.7	intron	beat-Ib -	chr2L_22_15925001	chr2L_15925001	0.50	D20-c2
167	chr2L	16067067	16067151	HMS-Beagle2	7194	6882	14	84	'8-6	67.70	7.7	1.6	intron	beat-Ia +	chr2L_14_16065001	chr2L_16065001	0.57	D20-c2
168	chr2L	16337443	16337513	mdg3	15	248	7	70	'3-4	64.47	7.1	0.9	exon	CG31817 -	chr2L_7_16335001	chr2L_16335001	0.43	D20-c2
169	chr2L	16444111	16444178	297	16	393	6	67	'2-4	72.77	8.3	0.6	intron	CG5888 -	chr2L_6_16440001	chr2L_16440001	0.33	D20-c2
170	chr2L	16478190	16478276	mdg3	5252	249	11	86	'6-5	65.67	10.2	1.0	intron	dac -	chr2L_11_16475001	chr2L_16475001	0.55	D20-c2
171	chr2L	16523219	16523270	Juan	7	4199	8	51	'5-3	59.70	7.7	0.9	intron	CG5953 -	chr2L_8_16520001	chr2L_16520001	0.62	D20-c2
172	chr2L	16600349	16600368	micropia	25	4962	7	19	'4-3	63.35	7.5	0.8	intron	CG42389 +	chr2L_7_16600001	chr2L_16600001	0.57	D20-c2
173	chr2L	16605862	16605895	F-element	11	43	10	33	'4-6	70.79	6.7	1.3	intron,5` UTR	CG42389 +,CG31815 +	chr2L_10_16605001	chr2L_16605001	0.40	D20-c2
174	chr2L	16635873	16635923	297	6966	6606	5	50	'4-1	66.35	3.5	1.1	intron	CG42389 +	chr2L_5_16635001	chr2L_16635001	0.80	D20-c2
175	chr2L	16861354	16861389	rover	347	7263	7	35	'2-5	63.53	8.3	0.8	exon	CG6012 -	chr2L_7_16860001	chr2L_16860001	0.29	D20-c2
176	chr2L	16884867	16884893	pogo	2071	2097	4	26	'3-1	68.75	5.2	0.6	intron,intron	CG31743 +,CG34313 +	chr2L_4_16880001	chr2L_16880001	0.75	D20-c2
177	chr2L	16939844	16939926	3S18	6104	5764	10	82	'3-7	66.84	6.6	1.3	intergenic	not near genes	chr2L_10_16935001	chr2L_16935001	0.30	D20-c2
178	chr2L	16947970	16948037	micropia	447	8	7	67	'1-6	63.63	10.7	0.6	intron	CR44393 -	chr2L_7_16945001	chr2L_16945001	0.14	D20-c2
179	chr2L	16999312	16999395	roo	4	412	12	83	'7-5	68.42	5.2	1.9	intergenic	CR45357 +	chr2L_12_16995001	chr2L_16995001	0.58	D20-c2
180	chr2L	17066646	17066722	mdg1	7459	7045	5	76	'4-1	68.42	5.3	0.8	intergenic	not near genes	chr2L_5_17065001	chr2L_17065001	0.80	D20-c2
181	chr2L	17081027	17081099	mdg3	5494	5258	9	72	'4-5	62.17	6.0	1.3	intergenic	not near genes	chr2L_9_17080001	chr2L_17080001	0.44	D20-c2
182	chr2L	17152248	17152330	297	391	6580	8	82	'3-5	67.44	5.1	1.3	intron,intron	CG34106 +,beat-IIIa +	chr2L_8_17150001	chr2L_17150001	0.38	D20-c2
183	chr2L	17205373	17205445	roo	406	8	10	72	'7-3	64.31	7.9	1.1	intron	beat-IIIc -	chr2L_10_17205001	chr2L_17205001	0.70	D20-c2
184	chr2L	17206752	17206815	copia	4887	254	7	63	'3-4	69.74	5.1	1.1	intron	beat-IIIc -	chr2L_7_17205001	chr2L_17205001	0.43	D20-c2
185	chr2L	17234480	17234500	jockey	4677	4697	7	20	'2-5	70.33	5.6	1.1	intron	beat-IIIc -	chr2L_7_17230001	chr2L_17230001	0.29	D20-c2
186	chr2L	17249362	17249441	copia	257	4874	6	79	'3-3	62.63	4.4	1.1	intron	beat-IIIc -	chr2L_6_17245001	chr2L_17245001	0.50	D20-c2
187	chr2L	17260206	17260232	Doc	18	43	5	26	'3-2	67.48	6.7	0.6	intron	beat-IIIc -	chr2L_5_17260001	chr2L_17260001	0.60	D20-c2
188	chr2L	17264743	17264828	blood	7008	376	14	85	'8-6	64.29	4.9	2.4	intergenic	not near genes	chr2L_14_17260001	chr2L_17260001	0.57	D20-c2
189	chr2L	17413277	17413355	mdg3	240	5251	9	78	'3-6	63.01	5.8	1.3	3` UTR,3` UTR	CG15141 +,Dif -	chr2L_9_17410001	chr2L_17410001	0.33	D20-c2
190	chr2L	17430654	17430720	297	6969	6580	5	66	'3-2	65.26	2.5	1.4	intron	Dif -	chr2L_5_17430001	chr2L_17430001	0.60	D20-c2
191	chr2L	17448212	17448266	FB	22	3	6	54	'2-4	60.96	5.8	0.9	intron	dl -	chr2L_6_17445001	chr2L_17445001	0.33	D20-c2
192	chr2L	17489676	17489761	3S18	5764	342	13	85	'9-4	65.51	9.0	1.3	intron	qua -	chr2L_13_17485001	chr2L_17485001	0.69	D20-c2
193	chr2L	18040679	18040750	pogo	2096	10	6	71	'3-3	70.61	5.6	0.9	intron	rdo +	chr2L_6_18040001	chr2L_18040001	0.50	D20-c2
194	chr2L	18278792	18278845	jockey	4764	4980	9	53	'3-6	64.73	6.7	1.2	3` UTR	CR44902 -	chr2L_9_18275001	chr2L_18275001	0.33	D20-c2
195	chr2L	18298085	18298121	jockey	479	443	13	36	'8-5	61.64	5.1	2.1	intergenic	not near genes	chr2L_13_18295001	chr2L_18295001	0.62	D20-c2
196	chr2L	18302713	18302733	blood	7017	7037	4	20	'2-2	65.02	10.5	0.3	intergenic	not near genes	chr2L_4_18300001	chr2L_18300001	0.50	D20-c2
197	chr2L	18460701	18460732	Juan	4199	24	4	31	'2-2	70.95	5.0	0.7	intron	let-7-C +	chr2L_4_18460001	chr2L_18460001	0.50	D20-c2
198	chr2L	18468169	18468185	micropia	20	4	5	16	'1-4	63.69	6.9	0.6	intron	let-7-C +	chr2L_5_18465001	chr2L_18465001	0.20	D20-c2
199	chr2L	18538473	18538495	Doc	31	9	6	22	'5-1	66.01	1.7	2.2	intron	Pde11 -	chr2L_6_18535001	chr2L_18535001	0.83	D20-c2
200	chr2L	18657563	18657649	flea	4754	255	14	86	'5-9	68.51	3.0	3.5	intron	MESR3 +	chr2L_14_18655001	chr2L_18655001	0.36	D20-c2
201	chr2L	18822660	18822693	G2	2984	2951	11	33	'4-7	66.39	4.0	2.2	intergenic	CG17324 +	chr2L_11_18820001	chr2L_18820001	0.36	D20-c2
202	chr2L	18850698	18850717	Doc	26	7	8	19	'5-3	63.75	5.4	1.2	intron	CG17321 +	chr2L_8_18850001	chr2L_18850001	0.62	D20-c2
203	chr2L	18875985	18876010	297	6590	6615	6	25	'3-3	67.98	11.2	0.5	intron	tup -	chr2L_6_18875001	chr2L_18875001	0.50	D20-c2
204	chr2L	18943079	18943155	297	6587	392	6	76	'3-3	63.81	7.9	0.7	intron	ssp3 -	chr2L_6_18940001	chr2L_18940001	0.50	D20-c2
205	chr2L	19140895	19140970	roo	400	8664	24	75	'11-13	67.74	5.2	3.9	intron	brat +	chr2L_24_19140001	chr2L_19140001	0.46	D20-c2
206	chr2L	19397792	19397876	mdg3	249	5253	14	84	'8-6	63.82	6.0	2.0	intron	CG17544 -	chr2L_14_19395001	chr2L_19395001	0.57	D20-c2
207	chr2L	19572187	19572266	rover	6957	348	11	79	'8-3	68.42	8.8	1.1	intron	spi -	chr2L_11_19570001	chr2L_19570001	0.73	D20-c2
208	chr2L	19619682	19619701	297	21	6583	5	19	'2-3	70.26	5.7	0.7	intron	Lar +	chr2L_5_19615001	chr2L_19615001	0.40	D20-c2
209	chr2L	19641045	19641128	roo	8663	408	17	83	'9-8	66.30	4.7	3.0	intron	Lar +	chr2L_17_19640001	chr2L_19640001	0.53	D20-c2
210	chr2L	19784531	19784617	opus	7500	110	10	86	'3-7	67.59	4.1	2.0	intron	CdGAPr -	chr2L_10_19780001	chr2L_19780001	0.30	D20-c2
211	chr2L	19786926	19786961	mdg3	17	5337	6	35	'5-1	61.85	8.5	0.6	intron	CdGAPr -	chr2L_6_19785001	chr2L_19785001	0.83	D20-c2
212	chr2L	19806584	19806659	copia	3	251	4	75	'1-3	64.80	5.4	0.6	intron	sick +	chr2L_4_19805001	chr2L_19805001	0.25	D20-c2
213	chr2L	19875626	19875707	mdg3	248	5256	6	81	'5-1	64.61	5.6	0.9	intron	sick +	chr2L_6_19875001	chr2L_19875001	0.83	D20-c2
214	chr2L	19880498	19880574	micropia	454	6	9	76	'5-4	64.43	6.5	1.2	intron	sick +	chr2L_9_19880001	chr2L_19880001	0.56	D20-c2
215	chr2L	19962476	19962504	Doc	14	47	8	28	'4-4	64.79	15.6	0.5	intergenic	CG13965 -,CG16772 +	chr2L_8_19960001	chr2L_19960001	0.50	D20-c2
216	chr2L	19989738	19989821	297	394	6582	7	83	'5-2	66.92	7.9	0.8	intron	CG43861 -	chr2L_7_19985001	chr2L_19985001	0.71	D20-c2
217	chr2L	20069000	20069070	FB	5	4	5	70	'2-3	63.95	5.0	0.8	intron,3` UTR	bwa +,CR44907 -	chr2L_5_20065001	chr2L_20065001	0.40	D20-c2
218	chr2L	20250332	20250357	jockey	12	32	6	25	'3-3	60.96	14.7	0.4	intergenic	not near genes	chr2L_6_20250001	chr2L_20250001	0.50	D20-c2
219	chr2L	20259004	20259067	Stalker2	7264	406	14	63	'4-10	64.92	8.2	1.5	intergenic	not near genes	chr2L_14_20255001	chr2L_20255001	0.29	D20-c2
220	chr2L	20286871	20286899	F-element	11	39	6	28	'3-3	58.22	7.9	0.7	intergenic	not near genes	chr2L_6_20285001	chr2L_20285001	0.50	D20-c2
221	chr2L	20287353	20287369	jockey	21	37	5	16	'2-3	59.47	8.8	0.5	intergenic	not near genes	chr2L_5_20285001	chr2L_20285001	0.40	D20-c2
222	chr2L	20375896	20375975	gypsy5	408	6942	11	79	'6-5	63.96	7.1	1.4	intergenic	not near genes	chr2L_11_20375001	chr2L_20375001	0.55	D20-c2
223	chr2L	20463518	20463577	3S18	5789	341	6	59	'3-3	71.49	4.0	1.2	intergenic	CG2493 -	chr2L_6_20460001	chr2L_20460001	0.50	D20-c2
224	chr2L	20629468	20629544	412	8	494	12	76	'4-8	67.98	5.8	1.8	intergenic	not near genes	chr2L_12_20625001	chr2L_20625001	0.33	D20-c2
225	chr2L	20821494	20821568	rover	5	7293	9	74	'4-5	63.89	7.4	1.1	intergenic	not near genes	chr2L_9_20820001	chr2L_20820001	0.44	D20-c2
226	chr2L	20878068	20878142	297	5	6971	6	74	'3-3	70.10	8.0	0.7	intron,intron	CG43739 -,sky -	chr2L_6_20875001	chr2L_20875001	0.50	D20-c2
227	chr2L	20906767	20906849	roo	413	8669	11	82	'7-4	64.95	7.7	1.3	intron,intron	CG43739 -,sky -	chr2L_11_20905001	chr2L_20905001	0.64	D20-c2
228	chr2L	21089152	21089234	flea	256	4759	10	82	'4-6	65.92	4.9	1.7	intergenic	CG9259 +,ppk13 -	chr2L_10_21085001	chr2L_21085001	0.40	D20-c2
229	chr2L	21250690	21250709	297	376	395	4	19	'1-3	71.62	11.1	0.3	intron	Hr39 +	chr2L_4_21250001	chr2L_21250001	0.25	D20-c2
230	chr2L	21273785	21273859	mdg3	243	5258	5	74	'3-2	67.82	8.5	0.5	intron	CG8671 +	chr2L_5_21270001	chr2L_21270001	0.60	D20-c2
231	chr2L	21305449	21305522	rover	6962	347	6	73	'2-4	68.20	0.9	3.2	intron	Mio -	chr2L_6_21305001	chr2L_21305001	0.33	D20-c2
232	chr2L	21360399	21360489	HMS-Beagle2	7199	6881	13	90	'5-8	65.79	4.2	2.5	intergenic	not near genes	chr2L_13_21360001	chr2L_21360001	0.38	D20-c2
233	chr2L	21607053	21607138	roo	408	8661	7	85	'1-6	72.26	2.5	2.0	intergenic	not near genes	chr2L_7_21605001	chr2L_21605001	0.14	D20-c2
234	chr2L	21691435	21691510	roo	402	1	12	75	'5-7	68.79	5.4	1.9	intron	CG31619 +	chr2L_12_21690001	chr2L_21690001	0.42	D20-c2
235	chr2L	21739472	21739489	INE-1	551	546	5	17	'3-2	53.33	11.2	0.4	intergenic	not near genes	chr2L_5_21735001	chr2L_21735001	0.60	D20-c2
236	chr2L	22079575	22079649	gtwin	8	473	11	74	'3-8	64.83	3.4	2.5	intergenic	ttm3 +	chr2L_11_22075001	chr2L_22075001	0.27	D20-c2
237	chr2L	22081262	22081321	roo	395	10	7	59	'6-1	62.22	5.1	1.1	intergenic	not near genes	chr2L_7_22080001	chr2L_22080001	0.86	D20-c2
238	chr2L	22092979	22092995	INE-1	535	551	4	16	'1-3	62.83	11.2	0.3	intergenic	not near genes	chr2L_4_22090001	chr2L_22090001	0.25	D20-c2
239	chr2L	22243426	22243457	412	2	7086	8	31	'2-6	70.01	11.7	0.6	3` UTR	CG3262 +	chr2L_8_22240001	chr2L_22240001	0.25	D20-c2
240	chr2L	22257386	22257451	hopper	1400	1412	7	65	'4-3	64.29	5.1	1.1	intron	Tif-IA +	chr2L_7_22255001	chr2L_22255001	0.57	D20-c2
241	chr2L	22497638	22497660	springer	7490	7512	4	22	'2-2	64.47	18.3	0.2	intergenic	not near genes	chr2L_4_22495001	chr2L_22495001	0.50	D20-c2
242	chr2L	22497728	22497751	copia	4901	4878	4	23	'3-1	66.78	2.3	1.2	intergenic	not near genes	chr2L_4_22495001	chr2L_22495001	0.75	D20-c2
243	chr2L	22646102	22646166	Stalker4	6975	409	10	64	'3-7	68.38	9.0	1.0	intron	CG40006 -	chr2L_10_22645001	chr2L_22645001	0.30	D20-c2
244	chr2L	23068866	23068927	1360	3373	4	11	61	'5-6	71.02	3.6	2.4	intergenic	CR43242 +,Spf45 -	chr2L_11_23065001	chr2L_23065001	0.45	D20-c2
245	chr2L	23295813	23295860	micropia	5414	4965	7	47	'2-5	63.45	2.6	1.9	intergenic	not near genes	chr2L_7_23295001	chr2L_23295001	0.29	D20-c2
246	chr2L	23299980	23299998	invader4	3081	340	8	18	'4-4	58.48	8.4	0.9	intergenic	not near genes	chr2L_8_23295001	chr2L_23295001	0.50	D20-c2
247	chr2R	330120	330207	HMS-Beagle2	7198	6883	11	87	'6-5	69.26	3.5	2.4	intergenic	not near genes	chr2R_11_330001	chr2R_330001	0.55	D20-c2
248	chr2R	544799	544864	HMS-Beagle	6803	234	13	65	'10-3	62.45	7.3	1.6	intron	CG40378 +	chr2R_13_540001	chr2R_540001	0.77	D20-c2
249	chr2R	883082	883097	F-element	13	28	4	15	'2-2	49.67	7.9	0.4	intergenic	not near genes	chr2R_4_880001	chr2R_880001	0.50	D20-c2
250	chr2R	892367	892439	Stalker2	393	2	10	72	'2-8	54.55	5.7	1.5	intergenic	not near genes	chr2R_10_890001	chr2R_890001	0.20	D20-c2
251	chr2R	1320687	1320710	diver2	366	343	11	23	'6-5	55.14	21.8	0.5	intergenic	not near genes	chr2R_11_1320001	chr2R_1320001	0.55	D20-c2
252	chr2R	1656790	1656811	Doc	5	26	5	21	'3-2	56.31	8.5	0.5	intron	CG41520 +	chr2R_5_1655001	chr2R_1655001	0.60	D20-c2
253	chr2R	1736173	1736206	Transpac	310	277	10	33	'5-5	67.76	6.7	1.3	intron	CG41520 +	chr2R_10_1735001	chr2R_1735001	0.50	D20-c2
254	chr2R	1879545	1879612	gypsy5	6943	406	8	67	'5-3	67.00	3.7	1.7	intron	CG17684 -	chr2R_8_1875001	chr2R_1875001	0.62	D20-c2
255	chr2R	2752390	2752434	copia	32	249	4	44	'1-3	70.07	8.1	0.4	intergenic	not near genes	chr2R_4_2750001	chr2R_2750001	0.25	D20-c2
256	chr2R	3162008	3162038	mdg1	390	7458	9	30	'5-4	66.23	5.7	1.3	intron	CG42596 +	chr2R_9_3160001	chr2R_3160001	0.56	D20-c2
257	chr2R	4137523	4137608	HMS-Beagle2	6886	7198	9	85	'5-4	63.89	4.4	1.7	intergenic	not near genes	chr2R_9_4135001	chr2R_4135001	0.56	D20-c2
258	chr2R	4339481	4339504	G5A	2781	2804	4	23	'1-3	77.57	4.9	0.7	intron	Gprk1 -	chr2R_4_4335001	chr2R_4335001	0.25	D20-c2
259	chr2R	4584700	4584746	Max-element	8262	291	15	46	'10-5	70.26	11.5	1.2	intergenic	not near genes	chr2R_15_4580001	chr2R_4580001	0.67	D20-c2
260	chr2R	4802880	4802897	mariner2	478	17	8	17	'3-5	60.89	18.0	0.4	intergenic	not near genes	chr2R_8_4800001	chr2R_4800001	0.38	D20-c2
261	chr2R	4933765	4933848	412	494	1	17	83	'8-9	60.22	3.1	4.1	intron	Ir41a +	chr2R_17_4930001	chr2R_4930001	0.47	D20-c2
262	chr2R	5129911	5129967	1360	3366	2	10	56	'6-4	70.72	6.8	1.3	intergenic	not near genes	chr2R_10_5125001	chr2R_5125001	0.60	D20-c2
263	chr2R	5179586	5179659	1360	3	3384	7	73	'3-4	66.73	5.5	1.1	intron	Nipped-A -	chr2R_7_5175001	chr2R_5175001	0.43	D20-c2
264	chr2R	5214966	5214993	F-element	13	40	5	27	'2-3	63.31	14.4	0.3	intron	Nipped-A -	chr2R_5_5210001	chr2R_5210001	0.40	D20-c2
265	chr2R	5284560	5284576	Doc4-element	2641	2625	5	16	'3-2	53.42	2.7	1.4	intron	d4 +	chr2R_5_5280001	chr2R_5280001	0.60	D20-c2
266	chr2R	5424268	5424289	1360	3333	3318	6	21	'5-1	70.65	12.3	0.5	intron	laccase2 +	chr2R_6_5420001	chr2R_5420001	0.83	D20-c2
267	chr2R	5532312	5532340	G4	3764	3724	4	28	'1-3	61.18	16.8	0.2	intron	CG30438 +	chr2R_4_5530001	chr2R_5530001	0.25	D20-c2
268	chr2R	5605530	5605591	Max-element	8534	20	13	61	'10-3	61.27	3.9	2.7	intergenic	not near genes	chr2R_13_5605001	chr2R_5605001	0.77	D20-c2
269	chr2R	5691118	5691199	copia	253	4868	8	81	'3-5	66.78	7.1	1.0	intron	scaf -	chr2R_8_5690001	chr2R_5690001	0.38	D20-c2
270	chr2R	5787236	5787317	roo	406	8663	13	81	'3-10	66.06	4.0	2.6	intergenic	not near genes	chr2R_13_5785001	chr2R_5785001	0.23	D20-c2
271	chr2R	5804024	5804109	mdg3	249	5252	12	85	'2-10	68.78	15.8	0.7	intergenic	not near genes	chr2R_12_5800001	chr2R_5800001	0.17	D20-c2
272	chr2R	5835353	5835387	Doc	1	35	9	34	'4-5	66.37	9.2	0.9	intron	dpr12 +	chr2R_9_5835001	chr2R_5835001	0.44	D20-c2
273	chr2R	5843213	5843282	blood	377	14	6	69	'5-1	62.28	6.7	0.8	intron	dpr12 +	chr2R_6_5840001	chr2R_5840001	0.83	D20-c2
274	chr2R	5850973	5851049	297	6	6973	7	76	'3-4	69.92	2.4	2.1	intron	dpr12 +	chr2R_7_5850001	chr2R_5850001	0.43	D20-c2
275	chr2R	6033366	6033417	297	5	6960	6	51	'3-3	66.10	9.5	0.6	intron	SCAP -	chr2R_6_6030001	chr2R_6030001	0.50	D20-c2
276	chr2R	6067131	6067211	flea	4760	255	9	80	'1-8	66.81	8.6	0.9	intron	CCHa2-R +	chr2R_9_6065001	chr2R_6065001	0.11	D20-c2
277	chr2R	6169346	6169418	Quasimodo	7364	9	6	72	'3-3	66.01	3.6	1.3	intergenic	EcR -	chr2R_6_6165001	chr2R_6165001	0.50	D20-c2
278	chr2R	6607951	6608024	mdg3	5253	237	12	73	'6-6	62.56	6.7	1.6	intron	jing +	chr2R_12_6605001	chr2R_6605001	0.50	D20-c2
279	chr2R	6779763	6779845	17.6	493	3	16	82	'6-10	67.30	4.6	2.9	intron,3` UTR	Epac -,Cyp6a2 -	chr2R_16_6775001	chr2R_6775001	0.38	D20-c2
280	chr2R	6991565	6991638	micropia	13	458	7	73	'4-3	64.66	5.9	1.0	intergenic	not near genes	chr2R_7_6990001	chr2R_6990001	0.57	D20-c2
281	chr2R	7119128	7119210	flea	254	4757	10	82	'6-4	66.18	9.9	0.9	intron	esn +	chr2R_10_7115001	chr2R_7115001	0.60	D20-c2
282	chr2R	7308240	7308316	mdg1	7038	7454	5	76	'2-3	66.91	5.5	0.8	intergenic	not near genes	chr2R_5_7305001	chr2R_7305001	0.40	D20-c2
283	chr2R	7462492	7462568	Max-element	6	301	19	76	'9-10	61.82	14.4	1.2	exon	CG11141 -	chr2R_19_7460001	chr2R_7460001	0.47	D20-c2
284	chr2R	7623522	7623592	297	5	394	6	70	'3-3	67.90	9.5	0.6	intron	CG43340 +	chr2R_6_7620001	chr2R_7620001	0.50	D20-c2
285	chr2R	7638221	7638299	rover	3	346	9	78	'3-6	68.56	6.8	1.2	intron	CG43340 +	chr2R_9_7635001	chr2R_7635001	0.33	D20-c2
286	chr2R	7771353	7771422	copia	4881	254	5	69	'4-1	65.79	4.9	0.8	intron,intron	CG30497 -,CG45093 -	chr2R_5_7770001	chr2R_7770001	0.80	D20-c2
287	chr2R	7848751	7848782	Doc	2	33	9	31	'5-4	62.81	11.1	0.7	intron	Dgk -	chr2R_9_7845001	chr2R_7845001	0.56	D20-c2
288	chr2R	7940594	7940618	jockey	9	33	6	24	'2-4	58.33	3.8	1.2	intron	CG30379 +	chr2R_6_7940001	chr2R_7940001	0.33	D20-c2
289	chr2R	8058218	8058300	flea	251	4754	21	82	'8-13	71.16	6.3	2.9	intron	CG12769 -	chr2R_21_8055001	chr2R_8055001	0.38	D20-c2
290	chr2R	8159202	8159264	mdg3	5266	239	5	62	'3-2	58.70	4.1	1.0	intergenic	CG8708 -	chr2R_5_8155001	chr2R_8155001	0.60	D20-c2
291	chr2R	8177008	8177080	mdg1	419	7047	8	72	'6-2	62.83	5.5	1.2	intron	LRP1 +	chr2R_8_8175001	chr2R_8175001	0.75	D20-c2
292	chr2R	8207457	8207539	Transpac	311	3	17	82	'10-7	63.93	5.9	2.5	intron	LRP1 +	chr2R_17_8205001	chr2R_8205001	0.59	D20-c2
293	chr2R	8240562	8240643	micropia	6	459	6	81	'5-1	66.45	10.5	0.5	intergenic	pnut +	chr2R_6_8240001	chr2R_8240001	0.83	D20-c2
294	chr2R	8284692	8284721	jockey	5	34	4	29	'1-3	68.09	9.2	0.4	intergenic	not near genes	chr2R_4_8280001	chr2R_8280001	0.25	D20-c2
295	chr2R	8381303	8381360	I-element	5343	11	10	57	'4-6	62.98	8.8	1.0	intron	pdm3 +	chr2R_10_8380001	chr2R_8380001	0.40	D20-c2
296	chr2R	8440117	8440191	roo	8663	399	11	74	'5-6	64.96	12.8	0.8	exon	Cyp4ad1 -	chr2R_11_8440001	chr2R_8440001	0.45	D20-c2
297	chr2R	8443321	8443567	297	16	394	6	246	'3-3	67.33	1.8	2.1	intergenic	not near genes	chr2R_6_8440001	chr2R_8440001	0.50	D20-c2
298	chr2R	8483908	8483965	Ivk	5368	4	6	57	'4-2	57.68	5.1	1.0	intron	mtt -	chr2R_6_8480001	chr2R_8480001	0.67	D20-c2
299	chr2R	8535014	8535090	Max-element	301	7	6	76	'4-2	66.47	4.8	1.0	intergenic	not near genes	chr2R_6_8535001	chr2R_8535001	0.67	D20-c2
300	chr2R	8608767	8608842	copia	257	9	10	75	'3-7	67.50	1.7	3.7	intron	rgr +	chr2R_10_8605001	chr2R_8605001	0.30	D20-c2
301	chr2R	8615127	8615183	297	28	394	6	56	'1-5	71.14	8.4	0.6	5` UTR	Cirl +	chr2R_6_8615001	chr2R_8615001	0.17	D20-c2
302	chr2R	8642902	8642969	Doc2-element	4765	4692	17	67	'11-6	59.22	3.3	4.0	intergenic	not near genes	chr2R_17_8640001	chr2R_8640001	0.65	D20-c2
303	chr2R	8657456	8657501	roo	23	9057	4	45	'3-1	68.09	2.4	1.2	intron	ptc +	chr2R_4_8655001	chr2R_8655001	0.75	D20-c2
304	chr2R	8717660	8717712	micropia	426	1	10	52	'3-7	67.16	3.6	2.2	3` UTR	PGRP-SC2 +	chr2R_10_8715001	chr2R_8715001	0.30	D20-c2
305	chr2R	8936338	8936362	F-element	4658	4682	6	24	'3-3	63.60	9.6	0.6	intron	FANCI -	chr2R_6_8935001	chr2R_8935001	0.50	D20-c2
306	chr2R	8970538	8970611	HMS-Beagle	6800	7035	15	73	'10-5	64.74	11.1	1.2	3` UTR	CG8213 -	chr2R_15_8970001	chr2R_8970001	0.67	D20-c2
307	chr2R	9072869	9072937	297	6594	391	5	68	'1-4	68.68	5.3	0.8	intron	ana +	chr2R_5_9070001	chr2R_9070001	0.20	D20-c2
308	chr2R	9072870	9072941	micropia	15	458	6	71	'4-2	68.42	5.1	1.0	intron	ana +	chr2R_6_9070001	chr2R_9070001	0.67	D20-c2
309	chr2R	9110058	9110129	Tabor	484	6849	10	71	'3-7	63.77	3.2	2.4	intergenic	Pmm45A -	chr2R_10_9110001	chr2R_9110001	0.30	D20-c2
310	chr2R	9138709	9138758	pogo	15	2084	7	49	'3-4	70.10	9.8	0.6	intron,intron	CG44286 +,CG8788 +	chr2R_7_9135001	chr2R_9135001	0.43	D20-c2
311	chr2R	9140581	9140789	297	6582	60	6	208	'5-1	64.47	5.1	1.0	intron,intron	CG44286 +,CG8788 +	chr2R_6_9140001	chr2R_9140001	0.83	D20-c2
312	chr2R	9164716	9164750	Ivk	13	5352	8	34	'4-4	66.28	9.2	0.8	5` UTR	CG8046 -	chr2R_8_9160001	chr2R_9160001	0.50	D20-c2
313	chr2R	9310024	9310094	mdg3	5257	238	6	70	'5-1	58.55	4.5	1.1	3` UTR,3` UTR	CG13739 -,CG13954 -	chr2R_6_9310001	chr2R_9310001	0.83	D20-c2
314	chr2R	9408146	9408197	copia	259	35	5	51	'3-2	68.12	4.5	0.9	intron	wun -	chr2R_5_9405001	chr2R_9405001	0.60	D20-c2
315	chr2R	9408173	9408234	FB	1	17	10	61	'7-3	63.55	3.4	2.3	intron	wun -	chr2R_10_9405001	chr2R_9405001	0.70	D20-c2
316	chr2R	9427629	9427705	297	4	390	8	76	'1-7	64.97	5.0	1.3	intron	Pdk +	chr2R_8_9425001	chr2R_9425001	0.12	D20-c2
317	chr2R	9556740	9556814	micropia	4966	456	12	74	'9-3	63.60	8.8	1.2	intergenic	not near genes	chr2R_12_9555001	chr2R_9555001	0.75	D20-c2
318	chr2R	9741316	9741399	mdg3	248	5254	22	83	'10-12	65.77	6.8	2.8	intron	sqa -	chr2R_22_9740001	chr2R_9740001	0.45	D20-c2
319	chr2R	9787878	9787962	flea	256	4757	12	84	'8-4	67.98	8.0	1.3	intron	CG1688 -	chr2R_12_9785001	chr2R_9785001	0.67	D20-c2
320	chr2R	9871002	9871073	roo	405	8	16	71	'9-7	63.65	3.8	3.3	intron	cbx -	chr2R_16_9870001	chr2R_9870001	0.56	D20-c2
321	chr2R	9951659	9951715	297	6966	6600	4	56	'2-2	68.03	7.0	0.5	intron	Mef2 -	chr2R_4_9950001	chr2R_9950001	0.50	D20-c2
322	chr2R	9960128	9960199	rover	6956	7290	11	71	'5-6	69.74	9.6	1.0	5` UTR	Pal1 +	chr2R_11_9960001	chr2R_9960001	0.45	D20-c2
323	chr2R	10168319	10168360	jockey	4975	10	7	41	'1-6	59.59	3.0	1.8	intron	KCNQ -	chr2R_7_10165001	chr2R_10165001	0.14	D20-c2
324	chr2R	10443517	10443596	297	6587	395	5	79	'2-3	68.68	3.8	1.0	intron	Galphao +	chr2R_5_10440001	chr2R_10440001	0.40	D20-c2
325	chr2R	10562360	10562432	3S18	7	6102	7	72	'4-3	63.53	1.1	3.3	intron	psq +	chr2R_7_10560001	chr2R_10560001	0.57	D20-c2
326	chr2R	10742126	10742198	297	6589	6971	5	72	'1-4	62.10	9.0	0.5	intron	CG33144 -	chr2R_5_10740001	chr2R_10740001	0.20	D20-c2
327	chr2R	10785038	10785116	flea	254	4761	11	78	'3-8	67.29	2.8	2.9	intron,5` UTR	CG33144 -,CR44299 +	chr2R_11_10785001	chr2R_10785001	0.27	D20-c2
328	chr2R	10846817	10846900	3S18	5766	342	17	83	'8-9	61.95	6.2	2.4	intron	CG30015 -	chr2R_17_10845001	chr2R_10845001	0.47	D20-c2
329	chr2R	10859765	10859790	3S18	25	5765	7	25	'3-4	60.26	1.6	2.7	intron,5` UTR	CG30015 -,CR44302 +	chr2R_7_10855001	chr2R_10855001	0.43	D20-c2
330	chr2R	10962935	10963015	297	393	6591	7	80	'6-1	65.14	5.4	1.1	intergenic	not near genes	chr2R_7_10960001	chr2R_10960001	0.86	D20-c2
331	chr2R	10969667	10969735	Idefix	8	7384	11	68	'8-3	69.26	2.6	3.1	intergenic	not near genes	chr2R_11_10965001	chr2R_10965001	0.73	D20-c2
332	chr2R	10971482	10971565	roo	409	8664	29	83	'16-13	62.61	6.7	3.8	intergenic	not near genes	chr2R_29_10970001	chr2R_10970001	0.55	D20-c2
333	chr2R	11444078	11444157	297	2	391	6	79	'3-3	66.45	6.6	0.8	intron	qvr +	chr2R_6_11440001	chr2R_11440001	0.50	D20-c2
334	chr2R	11498712	11498781	copia	240	4867	6	69	'2-4	64.47	5.2	1.0	intron	inv +	chr2R_6_11495001	chr2R_11495001	0.33	D20-c2
335	chr2R	11575031	11575174	INE-1	148	135	7	143	'3-4	57.52	1.2	3.2	intergenic	not near genes	chr2R_7_11575001	chr2R_11575001	0.43	D20-c2
336	chr2R	11659062	11659133	1360	5	5	25	71	'17-8	65.51	5.6	3.8	intron	Roc2 -	chr2R_25_11655001	chr2R_11655001	0.68	D20-c2
337	chr2R	11695599	11695671	roo	8668	402	21	72	'13-8	65.84	7.6	2.4	3` UTR	CG13197 +	chr2R_21_11695001	chr2R_11695001	0.62	D20-c2
338	chr2R	11735325	11735347	297	393	6952	5	22	'3-2	66.58	4.3	0.9	intergenic	not near genes	chr2R_5_11735001	chr2R_11735001	0.60	D20-c2
339	chr2R	11742737	11742818	copia	4872	257	11	81	'6-5	64.95	3.9	2.2	intergenic	not near genes	chr2R_11_11740001	chr2R_11740001	0.55	D20-c2
340	chr2R	12045163	12045217	copia	250	23	9	54	'4-5	64.11	2.9	2.3	intron	Drep-1 +	chr2R_9_12045001	chr2R_12045001	0.44	D20-c2
341	chr2R	12061326	12061347	diver	194	213	6	21	'2-4	56.88	8.9	0.6	intron	Drep-3 +	chr2R_6_12060001	chr2R_12060001	0.33	D20-c2
342	chr2R	12239937	12239965	jockey	35	7	11	28	'6-5	66.39	3.5	2.4	intergenic	CG13170 +	chr2R_11_12235001	chr2R_12235001	0.55	D20-c2
343	chr2R	12298291	12298350	Transpac	3	288	10	59	'7-3	64.61	3.3	2.3	3` UTR	CG42700 +	chr2R_10_12295001	chr2R_12295001	0.70	D20-c2
344	chr2R	12319851	12319924	invader4	2770	326	6	73	'1-5	67.41	2.5	1.7	intergenic	not near genes	chr2R_6_12315001	chr2R_12315001	0.17	D20-c2
345	chr2R	12451328	12451407	mdg3	5257	247	17	79	'9-8	61.65	6.0	2.4	intron	Dyb +	chr2R_17_12450001	chr2R_12450001	0.53	D20-c2
346	chr2R	12817128	12817204	297	6589	394	12	76	'4-8	73.25	4.5	2.2	intergenic	not near genes	chr2R_12_12815001	chr2R_12815001	0.33	D20-c2
347	chr2R	12988879	12988983	INE-1	24	22	6	104	'5-1	44.52	0.0	6.0	intergenic	not near genes	chr2R_6_12985001	chr2R_12985001	0.83	D20-c2
348	chr2R	13080128	13080207	Transpac	5	310	20	79	'10-10	68.93	2.9	5.1	intergenic	not near genes	chr2R_20_13080001	chr2R_13080001	0.50	D20-c2
349	chr2R	13108100	13108161	springer	7507	7145	8	61	'4-4	57.40	3.8	1.7	intergenic	not near genes	chr2R_8_13105001	chr2R_13105001	0.50	D20-c2
350	chr2R	13109556	13109635	Tabor	484	3	30	79	'16-14	63.64	6.0	4.3	intergenic	not near genes	chr2R_30_13105001	chr2R_13105001	0.53	D20-c2
351	chr2R	13224131	13224208	S-element	1709	1714	10	77	'4-6	65.79	3.6	2.2	intron	Dp +	chr2R_10_13220001	chr2R_13220001	0.40	D20-c2
352	chr2R	13242438	13242454	412	21	5	5	16	'1-4	60.79	3.8	1.0	intergenic	not near genes	chr2R_5_13240001	chr2R_13240001	0.20	D20-c2
353	chr2R	13255958	13255979	Max-element	8244	8265	8	21	'4-4	68.42	0.3	6.2	intergenic	CR44343 -	chr2R_8_13255001	chr2R_13255001	0.50	D20-c2
354	chr2R	13329820	13329848	297	6947	394	8	28	'4-4	66.61	0.6	5.0	3` UTR	CR44206 -	chr2R_8_13325001	chr2R_13325001	0.50	D20-c2
355	chr2R	13756616	13756670	Stalker2	7625	3	22	54	'9-13	67.34	6.6	2.9	exon	CG6280 +	chr2R_22_13755001	chr2R_13755001	0.41	D20-c2
356	chr2R	13931932	13932000	copia	16	257	7	68	'3-4	62.70	4.1	1.4	intron	shot -	chr2R_7_13930001	chr2R_13930001	0.43	D20-c2
357	chr2R	13990082	13990154	297	6585	386	5	72	'1-4	60.53	4.4	0.9	intron	RN-tre -	chr2R_5_13990001	chr2R_13990001	0.20	D20-c2
358	chr2R	14001597	14001669	297	6971	6585	5	72	'2-3	65.00	3.6	1.1	intron	mam +	chr2R_5_14000001	chr2R_14000001	0.40	D20-c2
359	chr2R	14011370	14011454	copia	257	4869	13	84	'8-5	68.93	4.9	2.2	intron	mam +	chr2R_13_14010001	chr2R_14010001	0.62	D20-c2
360	chr2R	14033267	14033297	jockey	6	36	13	30	'6-7	62.62	0.0	13.0	intron	mam +	chr2R_13_14030001	chr2R_14030001	0.46	D20-c2
361	chr2R	14082410	14082468	pogo	2100	7	5	58	'4-1	59.62	2.2	1.6	intron	Prosap -	chr2R_5_14080001	chr2R_14080001	0.80	D20-c2
362	chr2R	14246974	14247050	rover	7295	5	5	76	'3-2	67.11	3.2	1.2	5` UTR	Mdr50 +	chr2R_5_14245001	chr2R_14245001	0.60	D20-c2
363	chr2R	14278331	14278410	mdg3	5258	249	6	79	'4-2	65.04	8.5	0.6	5` UTR	Ih +	chr2R_6_14275001	chr2R_14275001	0.67	D20-c2
364	chr2R	14349303	14349338	Juan	4199	21	5	35	'3-2	63.95	10.9	0.4	intron	Shroom +	chr2R_5_14345001	chr2R_14345001	0.60	D20-c2
365	chr2R	14486613	14486685	297	6589	390	10	72	'4-6	68.29	5.5	1.5	intron	L +	chr2R_10_14485001	chr2R_14485001	0.40	D20-c2
366	chr2R	14590462	14590547	Stalker2	7246	7651	19	85	'12-7	61.27	5.3	3.0	intergenic	not near genes	chr2R_19_14590001	chr2R_14590001	0.63	D20-c2
367	chr2R	14764716	14764741	roo	9043	405	5	25	'2-3	59.87	1.9	1.7	intron	Spred -	chr2R_5_14760001	chr2R_14760001	0.40	D20-c2
368	chr2R	14921487	14921560	pogo	3	2091	26	73	'20-6	65.67	5.0	4.3	intron	CG10249 -	chr2R_26_14920001	chr2R_14920001	0.77	D20-c2
369	chr2R	15043166	15043258	micropia	5439	4962	10	92	'3-7	64.65	3.7	2.1	intergenic	not near genes	chr2R_10_15040001	chr2R_15040001	0.30	D20-c2
370	chr2R	15155039	15155111	Stalker2	7639	7247	12	72	'4-8	58.77	3.2	2.9	intergenic	igl +	chr2R_12_15155001	chr2R_15155001	0.33	D20-c2
371	chr2R	15373435	15373454	1360	136	117	4	19	'3-1	57.24	1.1	1.9	intergenic	not near genes	chr2R_4_15370001	chr2R_15370001	0.75	D20-c2
372	chr2R	15500339	15500422	roo	409	8664	20	83	'9-11	67.61	4.7	3.5	exon	Ir52a +	chr2R_20_15500001	chr2R_15500001	0.45	D20-c2
373	chr2R	15636753	15636836	roo	8665	409	26	83	'15-11	63.21	4.0	5.2	intron	CG42524 +	chr2R_26_15635001	chr2R_15635001	0.58	D20-c2
374	chr2R	15914661	15914746	copia	258	4869	16	85	'4-12	68.00	3.5	3.6	intron	sli -	chr2R_16_15910001	chr2R_15910001	0.25	D20-c2
375	chr2R	15947126	15947208	297	6972	6580	10	82	'6-4	68.95	5.1	1.6	3` UTR,3` UTR	Cyp4aa1 +,Strn-Mlck -	chr2R_10_15945001	chr2R_15945001	0.60	D20-c2
376	chr2R	16207985	16208067	297	392	9	8	82	'5-3	63.94	4.1	1.6	intron	mrj -	chr2R_8_16205001	chr2R_16205001	0.62	D20-c2
377	chr2R	16226919	16226972	Juan	4203	4027	9	53	'2-7	56.14	5.5	1.4	intron,intron	CG15706 -,Tsf3 +	chr2R_9_16225001	chr2R_16225001	0.22	D20-c2
378	chr2R	16248484	16248567	roo	406	8661	15	83	'6-9	69.82	4.2	2.9	intron	CngA -	chr2R_15_16245001	chr2R_16245001	0.40	D20-c2
379	chr2R	16257924	16257979	Stalker4	407	26	7	55	'4-3	63.99	4.0	1.4	intron	CngA -	chr2R_7_16255001	chr2R_16255001	0.57	D20-c2
380	chr2R	16257972	16258006	Stalker	33	6848	7	34	'5-2	67.10	6.3	1.0	intron	CngA -	chr2R_7_16255001	chr2R_16255001	0.71	D20-c2
381	chr2R	16714022	16714089	297	380	6584	15	67	'8-7	68.67	4.5	2.7	intron	CG30463 -	chr2R_15_16710001	chr2R_16710001	0.53	D20-c2
382	chr2R	16786978	16787044	297	12	6967	7	66	'3-4	67.67	4.2	1.3	intron	CG5522 +	chr2R_7_16785001	chr2R_16785001	0.43	D20-c2
383	chr2R	16933124	16933206	roo	8661	405	24	82	'17-7	66.34	5.0	4.0	intron	Pkc53E +	chr2R_24_16930001	chr2R_16930001	0.71	D20-c2
384	chr2R	16960547	16960635	HMS-Beagle	6794	248	20	88	'13-7	60.25	4.7	3.5	intergenic	CG9010 -	chr2R_20_16960001	chr2R_16960001	0.65	D20-c2
385	chr2R	17194517	17194537	mdg3	5254	5274	8	20	'5-3	61.51	7.7	0.9	intergenic	not near genes	chr2R_8_17190001	chr2R_17190001	0.62	D20-c2
386	chr2R	17286893	17286974	hobo	1	2709	21	81	'17-4	64.49	9.1	2.1	intron	mbl +	chr2R_21_17285001	chr2R_17285001	0.81	D20-c2
387	chr2R	17392598	17392671	rover	6955	340	16	73	'13-3	64.72	5.8	2.4	intergenic	not near genes	chr2R_16_17390001	chr2R_17390001	0.81	D20-c2
388	chr2R	17614212	17614295	copia	257	1	17	83	'12-5	65.71	4.7	3.0	intron	CG10936 -	chr2R_17_17610001	chr2R_17610001	0.71	D20-c2
389	chr2R	17853802	17853873	297	6588	388	19	71	'10-9	64.95	10.2	1.7	intron,exon	olf186-F +,CG30323 +	chr2R_19_17850001	chr2R_17850001	0.53	D20-c2
390	chr2R	17926007	17926083	roo	8672	410	18	76	'11-7	65.13	4.1	3.5	3` UTR	Elk +	chr2R_18_17925001	chr2R_17925001	0.61	D20-c2
391	chr2R	17937139	17937190	297	7	389	4	51	'1-3	65.46	5.3	0.6	intergenic	not near genes	chr2R_4_17935001	chr2R_17935001	0.25	D20-c2
392	chr2R	17960274	17960337	F-element	4342	4655	18	63	'6-12	60.53	5.6	2.7	intergenic	not near genes	chr2R_18_17960001	chr2R_17960001	0.33	D20-c2
393	chr2R	18026193	18026259	opus	494	14	9	66	'5-4	69.25	5.6	1.4	intergenic	not near genes	chr2R_9_18025001	chr2R_18025001	0.56	D20-c2
394	chr2R	18336919	18336951	Doc	143	111	10	32	'5-5	61.58	5.2	1.6	intron	sbb -	chr2R_10_18335001	chr2R_18335001	0.50	D20-c2
395	chr2R	18459013	18459102	roo	8662	413	25	89	'15-10	70.59	4.4	4.6	intron	CG30116 -	chr2R_25_18455001	chr2R_18455001	0.60	D20-c2
396	chr2R	18527342	18527404	mdg1	7458	7051	15	62	'12-3	61.66	7.6	1.7	intergenic	CG10924 +	chr2R_15_18525001	chr2R_18525001	0.80	D20-c2
397	chr2R	19143597	19143650	Juan	4203	4035	8	53	'6-2	62.50	4.9	1.4	intron	ena +	chr2R_8_19140001	chr2R_19140001	0.75	D20-c2
398	chr2R	19166641	19166694	FB	23	2	7	53	'3-4	73.07	3.0	1.8	intron	CG10737 +	chr2R_7_19165001	chr2R_19165001	0.43	D20-c2
399	chr2R	19203643	19203708	roo	4	9059	14	65	'6-8	62.60	6.0	2.0	intron	hppy +	chr2R_14_19200001	chr2R_19200001	0.43	D20-c2
400	chr2R	19204383	19204433	297	1	376	4	50	'2-2	70.42	5.5	0.6	intron	hppy +	chr2R_4_19200001	chr2R_19200001	0.50	D20-c2
401	chr2R	19216335	19216413	297	395	6587	8	78	'4-4	68.09	4.3	1.5	intron	hppy +	chr2R_8_19215001	chr2R_19215001	0.50	D20-c2
402	chr2R	19253978	19253997	jockey	4964	4983	8	19	'4-4	61.92	3.9	1.6	intergenic	not near genes	chr2R_8_19250001	chr2R_19250001	0.50	D20-c2
403	chr2R	19301069	19301135	diver	4	213	5	66	'1-4	64.40	4.6	0.9	intron	Tab2 +	chr2R_5_19300001	chr2R_19300001	0.20	D20-c2
404	chr2R	19330279	19330346	McClintock	5957	6420	10	67	'5-5	63.06	6.7	1.3	intron	Rgk1 -	chr2R_10_19330001	chr2R_19330001	0.50	D20-c2
405	chr2R	19427055	19427130	mdg3	5252	5490	7	75	'6-1	65.73	4.6	1.2	exon	CalpA +	chr2R_7_19425001	chr2R_19425001	0.86	D20-c2
406	chr2R	19560503	19560531	jockey	6	18	27	28	'15-12	59.03	22.9	1.1	intron	sm -	chr2R_27_19560001	chr2R_19560001	0.56	D20-c2
407	chr2R	19616185	19616258	297	6591	6974	5	73	'1-4	68.38	3.8	1.0	intron	sm -	chr2R_5_19615001	chr2R_19615001	0.20	D20-c2
408	chr2R	19726490	19726577	copia	4868	259	22	87	'17-5	68.66	10.6	1.9	intergenic	not near genes	chr2R_22_19725001	chr2R_19725001	0.77	D20-c2
409	chr2R	19874506	19874575	Tabor	9	7319	18	69	'11-7	62.35	6.0	2.6	intergenic	not near genes	chr2R_18_19870001	chr2R_19870001	0.61	D20-c2
410	chr2R	20006212	20006287	flea	5009	4760	15	75	'8-7	63.77	4.3	2.8	intergenic	not near genes	chr2R_15_20005001	chr2R_20005001	0.53	D20-c2
411	chr2R	20232578	20232639	297	6591	382	4	61	'3-1	62.69	3.4	0.9	intron	CG11044 +	chr2R_4_20230001	chr2R_20230001	0.75	D20-c2
412	chr2R	20301905	20301977	roo	4	402	14	72	'5-9	71.39	6.3	1.9	intergenic	CR44640 +	chr2R_14_20300001	chr2R_20300001	0.36	D20-c2
413	chr2R	20754757	20754845	Stalker	388	6846	17	88	'9-8	65.79	3.2	4.0	intergenic	not near genes	chr2R_17_20750001	chr2R_20750001	0.53	D20-c2
414	chr2R	20754785	20754832	Stalker4	7316	10	5	47	'1-4	62.11	4.1	1.0	intergenic	not near genes	chr2R_5_20750001	chr2R_20750001	0.20	D20-c2
415	chr2R	20912172	20912253	412	1	7545	15	81	'8-7	62.90	4.6	2.7	intergenic	not near genes	chr2R_15_20910001	chr2R_20910001	0.53	D20-c2
416	chr2R	20966860	20966938	roo	7	410	6	78	'1-5	65.05	3.0	1.5	intergenic	not near genes	chr2R_6_20965001	chr2R_20965001	0.17	D20-c2
417	chr2R	21038169	21038245	roo	8665	9066	15	76	'11-4	67.96	5.3	2.4	intergenic	not near genes	chr2R_15_21035001	chr2R_21035001	0.73	D20-c2
418	chr2R	21264507	21264609	diver	226	5887	19	102	'15-4	62.20	6.0	2.7	exon	Rgk3 +	chr2R_19_21260001	chr2R_21260001	0.79	D20-c2
419	chr2R	21285545	21285576	297	6946	396	9	31	'3-6	65.94	4.2	1.7	3` UTR,3` UTR	MFS16 +,CG10505 -	chr2R_9_21285001	chr2R_21285001	0.33	D20-c2
420	chr2R	21373666	21373754	mdg3	5251	250	16	88	'12-4	62.98	4.7	2.8	intron	cv-2 -	chr2R_16_21370001	chr2R_21370001	0.75	D20-c2
421	chr2R	21507955	21508035	297	6972	6582	10	80	'5-5	67.24	4.8	1.7	intron	MESK2 +	chr2R_10_21505001	chr2R_21505001	0.50	D20-c2
422	chr2R	21572945	21572970	copia	31	4	4	25	'3-1	72.04	0.0	4.0	intron	CG10440 -	chr2R_4_21570001	chr2R_21570001	0.75	D20-c2
423	chr2R	21803317	21803350	roo	9038	408	11	33	'5-6	64.12	1.6	4.2	intergenic	CR9284 +	chr2R_11_21800001	chr2R_21800001	0.45	D20-c2
424	chr2R	21830433	21830486	blood	7012	378	7	53	'6-1	55.64	4.5	1.3	intron	CG13492 -	chr2R_7_21830001	chr2R_21830001	0.86	D20-c2
425	chr2R	21904867	21904946	297	395	6587	6	79	'5-1	66.89	5.0	1.0	intron	Fili +	chr2R_6_21900001	chr2R_21900001	0.83	D20-c2
426	chr2R	21935174	21935256	pogo	2099	2	17	82	'10-7	66.79	3.0	4.2	intron,exon	Fili +,CG43742 -	chr2R_17_21935001	chr2R_21935001	0.59	D20-c2
427	chr2R	22077980	22078048	297	394	6586	7	68	'4-3	68.61	6.9	0.9	3` UTR	GlcT-1 +	chr2R_7_22075001	chr2R_22075001	0.57	D20-c2
428	chr2R	22351479	22351498	jockey	30	11	7	19	'4-3	63.37	4.3	1.3	intron	Liprin-gamma -	chr2R_7_22350001	chr2R_22350001	0.57	D20-c2
429	chr2R	22553918	22553994	micropia	4964	456	11	76	'10-1	62.20	4.2	2.1	intron	px -	chr2R_11_22550001	chr2R_22550001	0.91	D20-c2
430	chr2R	22644113	22644195	297	394	2	7	82	'3-4	69.92	5.0	1.2	intergenic	Ugt58Fa -	chr2R_7_22640001	chr2R_22640001	0.43	D20-c2
431	chr2R	22780416	22780490	412	10	494	19	74	'7-12	62.43	7.0	2.4	intron	CG42260 -	chr2R_19_22780001	chr2R_22780001	0.37	D20-c2
432	chr2R	22973304	22973390	blood	380	7011	34	86	'20-14	63.80	6.5	4.5	intergenic	not near genes	chr2R_34_22970001	chr2R_22970001	0.59	D20-c2
433	chr2R	23268454	23268513	Quasimodo	14	7358	7	59	'1-6	65.41	4.4	1.3	intergenic	not near genes	chr2R_7_23265001	chr2R_23265001	0.14	D20-c2
434	chr2R	23583473	23583547	297	6971	6587	11	74	'9-2	66.69	4.5	2.0	intron	apt +	chr2R_11_23580001	chr2R_23580001	0.82	D20-c2
435	chr2R	23718648	23718683	roo	33	8663	9	35	'4-5	68.62	7.0	1.1	intron	Sesn +	chr2R_9_23715001	chr2R_23715001	0.44	D20-c2
436	chr2R	23872907	23872933	297	28	6583	7	26	'3-4	66.26	6.7	0.9	intron	ken +	chr2R_7_23870001	chr2R_23870001	0.43	D20-c2
437	chr2R	24046353	24046429	297	6581	6967	5	76	'3-2	68.16	6.1	0.7	intron	tsr -	chr2R_5_24045001	chr2R_24045001	0.60	D20-c2
438	chr2R	24132646	24132724	297	6582	6970	16	78	'8-8	66.67	8.2	1.7	intron	tamo -	chr2R_16_24130001	chr2R_24130001	0.50	D20-c2
439	chr2R	24383343	24383423	mdg3	247	5256	19	80	'7-12	62.88	6.6	2.5	exon	mAChR-A -	chr2R_19_24380001	chr2R_24380001	0.37	D20-c2
440	chr2R	24388564	24388939	jockey	7	4987	38	375	'13-25	62.96	4.4	7.0	intron	mAChR-A -	chr2R_38_24385001	chr2R_24385001	0.34	D20-c2
441	chr2R	24550705	24550726	jockey	4776	4755	5	21	'3-2	62.37	3.8	1.0	intron,intron	CG4622 -,ITP +	chr2R_5_24550001	chr2R_24550001	0.60	D20-c2
442	chr2R	24674047	24674084	copia	242	4901	6	37	'4-2	64.60	4.8	1.0	intron	Mmp1 -	chr2R_6_24670001	chr2R_24670001	0.67	D20-c2
443	chr2R	25081384	25081443	297	6606	394	13	59	'2-11	72.33	7.3	1.6	intron	gol -	chr2R_13_25080001	chr2R_25080001	0.15	D20-c2
444	chr2R	25203767	25203796	1360	4	3356	8	29	'6-2	63.32	3.8	1.7	intron	CG9380 -	chr2R_8_25200001	chr2R_25200001	0.75	D20-c2
445	chr3L	25368	25387	HeT-A	6034	6051	12	19	'7-5	52.43	5.7	1.8	exon	mthl8 +	chr3L_12_25001	chr3L_25001	0.58	D20-c2
446	chr3L	37378	37448	micropia	5434	4963	7	70	'2-5	62.64	18.9	0.4	intergenic	not near genes	chr3L_7_35001	chr3L_35001	0.29	D20-c2
447	chr3L	39497	39581	rover	6950	7297	29	84	'18-11	65.95	8.0	3.2	intergenic	not near genes	chr3L_29_35001	chr3L_35001	0.62	D20-c2
448	chr3L	119528	119603	copia	247	4868	8	75	'2-6	67.37	13.8	0.5	intergenic	not near genes	chr3L_8_115001	chr3L_115001	0.25	D20-c2
449	chr3L	122996	123074	297	1	6970	9	78	'6-3	64.57	27.3	0.3	intergenic	not near genes	chr3L_9_120001	chr3L_120001	0.67	D20-c2
450	chr3L	145174	145248	rover	343	6	11	74	'6-5	70.93	7.3	1.3	3` UTR	Pdk1 +	chr3L_11_145001	chr3L_145001	0.55	D20-c2
451	chr3L	176592	176637	Juan	12	4203	5	45	'4-1	63.95	19.4	0.2	3` UTR	Vdup1 -	chr3L_5_175001	chr3L_175001	0.80	D20-c2
452	chr3L	305224	305296	297	6971	6589	8	72	'4-4	63.32	7.7	0.9	3` UTR	RhoGEF3 +	chr3L_8_305001	chr3L_305001	0.50	D20-c2
453	chr3L	518741	518811	297	6584	6964	7	70	'3-4	67.11	15.8	0.4	intron	klar -	chr3L_7_515001	chr3L_515001	0.43	D20-c2
454	chr3L	561610	561662	copia	4896	252	6	52	'3-3	71.05	7.4	0.7	intron	hipk +	chr3L_6_560001	chr3L_560001	0.50	D20-c2
455	chr3L	825528	825607	roo	8661	409	21	79	'10-11	64.52	0.0	21.0	intergenic	not near genes	chr3L_21_825001	chr3L_825001	0.48	D20-c2
456	chr3L	827154	827234	412	3	495	21	80	'14-7	62.00	5.7	3.1	intron,intron	CG13900 -,CR45184 -	chr3L_21_825001	chr3L_825001	0.67	D20-c2
457	chr3L	1013866	1013946	micropia	6	458	10	80	'6-4	67.40	10.0	0.9	intron	trio -	chr3L_10_1010001	chr3L_1010001	0.60	D20-c2
458	chr3L	1032531	1032627	297	2	6580	4	96	'2-2	70.40	8.7	0.4	intron	trio -	chr3L_4_1030001	chr3L_1030001	0.50	D20-c2
459	chr3L	1096481	1096552	copia	6	250	5	71	'4-1	60.52	7.5	0.6	intron	bab1 -	chr3L_5_1095001	chr3L_1095001	0.80	D20-c2
460	chr3L	1262394	1262472	mdg3	5253	5494	12	78	'9-3	65.24	6.8	1.5	intron	CG9134 +	chr3L_12_1260001	chr3L_1260001	0.75	D20-c2
461	chr3L	1321502	1321573	297	6965	6584	5	71	'1-4	65.79	9.3	0.5	intron	Myo61F +	chr3L_5_1320001	chr3L_1320001	0.20	D20-c2
462	chr3L	1589796	1589866	copia	4880	254	6	70	'3-3	64.03	2.6	1.7	intron	CG13917 +	chr3L_6_1585001	chr3L_1585001	0.50	D20-c2
463	chr3L	1609711	1609755	copia	12	229	7	44	'5-2	69.93	0.4	5.0	intron,intron	CG18170 +,CG33791 +	chr3L_7_1605001	chr3L_1605001	0.71	D20-c2
464	chr3L	1727959	1728042	Burdock	256	6138	17	83	'10-7	67.31	6.7	2.2	intron	drpr -	chr3L_17_1725001	chr3L_1725001	0.59	D20-c2
465	chr3L	1740855	1741127	opus	7113	7496	23	272	'11-12	67.22	2.0	7.7	intron	Gk +	chr3L_23_1740001	chr3L_1740001	0.48	D20-c2
466	chr3L	1976171	1976246	roo	407	6	22	75	'11-11	65.55	3.4	5.0	intergenic	not near genes	chr3L_22_1975001	chr3L_1975001	0.50	D20-c2
467	chr3L	1996255	1996335	roo	404	8662	26	80	'13-13	68.00	6.1	3.7	intergenic	not near genes	chr3L_26_1995001	chr3L_1995001	0.50	D20-c2
468	chr3L	2098718	2098804	mdg3	249	5252	27	86	'10-17	65.06	13.8	1.8	exon	sls -	chr3L_27_2095001	chr3L_2095001	0.37	D20-c2
469	chr3L	2216571	2216600	jockey	37	9	16	29	'9-7	57.23	8.4	1.7	intergenic	not near genes	chr3L_16_2215001	chr3L_2215001	0.56	D20-c2
470	chr3L	2225242	2225327	roo	9071	8661	40	85	'21-19	68.79	9.7	3.7	intergenic	not near genes	chr3L_40_2225001	chr3L_2225001	0.53	D20-c2
471	chr3L	2248548	2248581	opus	145	7115	14	33	'8-6	62.50	2.4	4.1	3` UTR	CG32301 +	chr3L_14_2245001	chr3L_2245001	0.57	D20-c2
472	chr3L	2426659	2426718	pogo	2099	25	11	59	'6-5	77.63	5.3	1.7	intron	CG45186 +	chr3L_11_2425001	chr3L_2425001	0.55	D20-c2
473	chr3L	2527278	2527302	297	6586	6608	4	24	'3-1	69.26	7.0	0.5	intron	Spn -	chr3L_4_2525001	chr3L_2525001	0.75	D20-c2
474	chr3L	2672944	2673029	flea	4755	255	5	85	'1-4	70.00	5.7	0.7	intron	Fife -	chr3L_5_2670001	chr3L_2670001	0.20	D20-c2
475	chr3L	2796034	2796054	rover	7279	348	4	20	'2-2	69.74	7.3	0.5	intron	CG43444 -	chr3L_4_2795001	chr3L_2795001	0.50	D20-c2
476	chr3L	2987490	2987556	297	368	6586	6	66	'5-1	62.72	6.1	0.8	intergenic	not near genes	chr3L_6_2985001	chr3L_2985001	0.83	D20-c2
477	chr3L	3240511	3240591	diver	224	5890	30	80	'20-10	63.79	5.5	4.6	intergenic	not near genes	chr3L_30_3240001	chr3L_3240001	0.67	D20-c2
478	chr3L	3389773	3389847	297	6591	394	4	74	'3-1	64.81	5.6	0.6	intergenic	not near genes	chr3L_4_3385001	chr3L_3385001	0.75	D20-c2
479	chr3L	3434434	3434510	297	394	7	6	76	'3-3	67.05	4.1	1.2	intron	eIF5B -	chr3L_6_3430001	chr3L_3430001	0.50	D20-c2
480	chr3L	3444396	3444475	297	6970	6583	10	79	'3-7	68.49	4.6	1.8	intron	eIF5B -	chr3L_10_3440001	chr3L_3440001	0.30	D20-c2
481	chr3L	3551584	3551649	micropia	4	447	6	65	'5-1	61.67	8.4	0.6	intron	Eip63E +	chr3L_6_3550001	chr3L_3550001	0.83	D20-c2
482	chr3L	3612801	3612875	micropia	10	456	7	74	'5-2	64.85	4.5	1.3	intron	CG10359 +	chr3L_7_3610001	chr3L_3610001	0.71	D20-c2
483	chr3L	3739072	3739150	297	1	389	4	78	'3-1	65.13	4.9	0.7	intron	CG32264 -	chr3L_4_3735001	chr3L_3735001	0.75	D20-c2
484	chr3L	3972483	3972563	mdg3	5253	5498	17	80	'12-5	64.28	2.8	4.5	intergenic	CG43915 +	chr3L_17_3970001	chr3L_3970001	0.71	D20-c2
485	chr3L	4084598	4084671	diver	224	9	24	73	'15-9	63.99	3.9	4.9	intron	Gad1 -	chr3L_24_4080001	chr3L_4080001	0.62	D20-c2
486	chr3L	4085875	4085948	297	393	6589	11	73	'9-2	66.88	6.2	1.5	intron	Gad1 -	chr3L_11_4085001	chr3L_4085001	0.82	D20-c2
487	chr3L	4104129	4104196	297	390	13	5	67	'2-3	64.21	8.8	0.5	intron	Fit1 +	chr3L_5_4100001	chr3L_4100001	0.40	D20-c2
488	chr3L	4108010	4108072	mdg1	6	405	8	62	'1-7	78.83	0.0	8.0	intergenic	Ack +	chr3L_8_4105001	chr3L_4105001	0.12	D20-c2
489	chr3L	4464699	4464764	rover	7286	7	6	65	'3-3	63.82	4.8	1.0	intergenic	CG32241 -	chr3L_6_4460001	chr3L_4460001	0.50	D20-c2
490	chr3L	4758551	4758566	Doc	3	9	5	15	'3-2	54.13	3.2	1.2	intron,3` UTR	RhoGEF64C +,CG13711 +	chr3L_5_4755001	chr3L_4755001	0.60	D20-c2
491	chr3L	4871635	4871650	jockey	34	19	8	15	'4-4	58.56	8.3	0.9	intron	CG17150 +	chr3L_8_4870001	chr3L_4870001	0.50	D20-c2
492	chr3L	5074580	5074663	flea	4754	253	17	83	'11-6	66.43	4.2	3.3	intron	Con -	chr3L_17_5070001	chr3L_5070001	0.65	D20-c2
493	chr3L	5166404	5166458	297	6598	381	4	54	'3-1	74.67	4.3	0.8	intron	shep -	chr3L_4_5165001	chr3L_5165001	0.75	D20-c2
494	chr3L	5637653	5637703	copia	237	14	5	50	'2-3	56.31	7.4	0.6	intron	Blimp-1 +	chr3L_5_5635001	chr3L_5635001	0.40	D20-c2
495	chr3L	5919322	5919378	roo	414	8696	14	56	'12-2	62.97	6.6	1.8	intron,5` UTR	CG10483 -,CR45167 +	chr3L_14_5915001	chr3L_5915001	0.86	D20-c2
496	chr3L	6011513	6011595	297	393	6584	6	82	'2-4	62.94	4.0	1.2	intron	PVRAP +	chr3L_6_6010001	chr3L_6010001	0.33	D20-c2
497	chr3L	6231411	6231467	mdg3	5272	239	7	56	'4-3	66.54	3.6	1.5	intergenic	CG13299 -	chr3L_7_6230001	chr3L_6230001	0.57	D20-c2
498	chr3L	6326841	6326926	mdg3	253	5257	17	85	'11-6	61.19	4.9	2.9	exon	Or65b +	chr3L_17_6325001	chr3L_6325001	0.65	D20-c2
499	chr3L	6343101	6343129	Doc	33	5	7	28	'3-4	65.04	4.4	1.3	intron	CG13300 -	chr3L_7_6340001	chr3L_6340001	0.43	D20-c2
500	chr3L	6539966	6540032	hobo	2937	5	12	66	'4-8	62.16	5.9	1.7	intron	sfl +	chr3L_12_6535001	chr3L_6535001	0.33	D20-c2
501	chr3L	6694824	6694861	Juan	4197	13	4	37	'2-2	61.51	7.0	0.5	intron	SP1173 -	chr3L_4_6690001	chr3L_6690001	0.50	D20-c2
502	chr3L	7445986	7446020	3S18	5801	2	7	34	'4-3	64.95	4.2	1.3	intron	CG42458 +	chr3L_7_7445001	chr3L_7445001	0.57	D20-c2
503	chr3L	7847105	7847120	297	380	394	5	15	'3-2	62.79	2.4	1.5	intron	Pdp1 -	chr3L_5_7845001	chr3L_7845001	0.60	D20-c2
504	chr3L	7849501	7849575	297	393	6590	7	74	'6-1	71.80	4.8	1.2	intron	Pdp1 -	chr3L_7_7845001	chr3L_7845001	0.86	D20-c2
505	chr3L	8083509	8083566	297	6964	16	6	57	'3-3	66.89	2.8	1.6	intron	Ect4 +	chr3L_6_8080001	chr3L_8080001	0.50	D20-c2
506	chr3L	8551072	8551147	297	6973	6588	6	75	'4-2	70.18	10.4	0.5	intron	rhea +	chr3L_6_8550001	chr3L_8550001	0.67	D20-c2
507	chr3L	8683283	8683310	mdg3	31	5256	6	27	'3-3	61.76	9.0	0.6	intergenic	not near genes	chr3L_6_8680001	chr3L_8680001	0.50	D20-c2
508	chr3L	8693109	8693194	297	394	6580	11	85	'6-5	69.86	5.3	1.7	5` UTR	CR44526 +	chr3L_11_8690001	chr3L_8690001	0.55	D20-c2
509	chr3L	8699466	8699533	297	6587	383	4	67	'2-2	64.14	4.7	0.7	intergenic	not near genes	chr3L_4_8695001	chr3L_8695001	0.50	D20-c2
510	chr3L	8699929	8700010	297	6583	391	11	81	'4-7	69.17	5.8	1.6	intergenic	not near genes	chr3L_11_8695001	chr3L_8695001	0.36	D20-c2
511	chr3L	8811317	8811401	micropia	1	457	8	84	'4-4	68.42	5.3	1.3	intergenic	CG13309 +	chr3L_8_8810001	chr3L_8810001	0.50	D20-c2
512	chr3L	8841001	8841079	copia	4875	257	13	78	'5-8	66.09	1.3	5.7	intron	dally +	chr3L_13_8840001	chr3L_8840001	0.38	D20-c2
513	chr3L	8870217	8870289	micropia	11	455	20	72	'11-9	62.63	5.2	3.2	intron	dally +	chr3L_20_8870001	chr3L_8870001	0.55	D20-c2
514	chr3L	9229002	9229083	HMS-Beagle	241	6794	30	81	'13-17	65.38	5.6	4.5	intergenic	not near genes	chr3L_30_9225001	chr3L_9225001	0.43	D20-c2
515	chr3L	9262717	9262738	Doc	5	26	9	21	'3-6	60.18	6.8	1.2	intron	GluRIB +	chr3L_9_9260001	chr3L_9260001	0.33	D20-c2
516	chr3L	9382954	9383004	copia	16	239	6	50	'2-4	71.71	5.3	1.0	intergenic	Hsp23 +	chr3L_6_9380001	chr3L_9380001	0.33	D20-c2
517	chr3L	9673779	9673858	mdg3	247	5256	10	79	'4-6	63.95	1.8	3.6	intron	fry -	chr3L_10_9670001	chr3L_9670001	0.40	D20-c2
518	chr3L	9786519	9786576	mdg1	7047	7442	10	57	'3-7	65.44	2.8	2.6	intergenic	CG8177 +	chr3L_10_9785001	chr3L_9785001	0.30	D20-c2
519	chr3L	9807311	9807378	mdg3	16	246	13	67	'6-7	63.21	4.5	2.4	intron	CG32052 +	chr3L_13_9805001	chr3L_9805001	0.46	D20-c2
520	chr3L	9902470	9902548	297	6588	395	6	78	'3-3	67.32	5.0	1.0	3` UTR	nudE +	chr3L_6_9900001	chr3L_9900001	0.50	D20-c2
521	chr3L	10035230	10035291	BS	5002	5084	19	61	'13-6	63.71	3.8	4.0	intron	dpr6 +	chr3L_19_10035001	chr3L_10035001	0.68	D20-c2
522	chr3L	10037729	10037799	pogo	2088	3	10	70	'4-6	61.84	4.5	1.8	intron	dpr6 +	chr3L_10_10035001	chr3L_10035001	0.40	D20-c2
523	chr3L	10084796	10084861	17.6	7416	6943	9	65	'6-3	63.89	4.3	1.7	intron	dpr6 +	chr3L_9_10080001	chr3L_10080001	0.67	D20-c2
524	chr3L	10091682	10091760	412	7	495	11	78	'5-6	69.14	3.4	2.5	intron,exon	dpr6 +,CG32053 -	chr3L_11_10090001	chr3L_10090001	0.45	D20-c2
525	chr3L	10168095	10168146	Transpac	311	4953	6	51	'4-2	68.64	3.2	1.4	intron	dpr10 -	chr3L_6_10165001	chr3L_10165001	0.67	D20-c2
526	chr3L	10188280	10188352	micropia	5438	4965	5	72	'2-3	63.50	6.0	0.7	intergenic	not near genes	chr3L_5_10185001	chr3L_10185001	0.40	D20-c2
527	chr3L	10344822	10344901	3S18	5768	340	7	79	'6-1	67.72	5.7	1.0	intergenic	not near genes	chr3L_7_10340001	chr3L_10340001	0.86	D20-c2
528	chr3L	10347862	10347907	Juan	17	4204	4	45	'2-2	63.81	7.1	0.5	intergenic	CR44327 +	chr3L_4_10345001	chr3L_10345001	0.50	D20-c2
529	chr3L	10370584	10370649	micropia	457	4976	4	65	'3-1	64.02	7.2	0.5	intergenic	not near genes	chr3L_4_10370001	chr3L_10370001	0.75	D20-c2
530	chr3L	10510309	10510382	Quasimodo	7365	9	5	73	'4-1	64.48	2.7	1.4	intron	A2bp1 +	chr3L_5_10510001	chr3L_10510001	0.80	D20-c2
531	chr3L	10516730	10516756	rover	6956	31	6	26	'4-2	67.76	13.8	0.4	intron	A2bp1 +	chr3L_6_10515001	chr3L_10515001	0.67	D20-c2
532	chr3L	10644795	10644825	jockey	6	36	10	30	'6-4	61.71	6.5	1.3	intron	CG32066 -	chr3L_10_10640001	chr3L_10640001	0.60	D20-c2
533	chr3L	10677523	10677610	flea	257	4755	10	87	'4-6	67.59	4.5	1.8	intron	simj +	chr3L_10_10675001	chr3L_10675001	0.40	D20-c2
534	chr3L	10706556	10706628	297	6586	6968	5	72	'3-2	59.74	0.6	3.1	intergenic	not near genes	chr3L_5_10705001	chr3L_10705001	0.60	D20-c2
535	chr3L	10757840	10757893	Max-element	30	301	29	53	'9-20	60.69	3.9	5.9	intergenic	not near genes	chr3L_29_10755001	chr3L_10755001	0.31	D20-c2
536	chr3L	10840962	10841048	297	387	6580	7	86	'2-5	71.24	5.2	1.1	intergenic	not near genes	chr3L_7_10840001	chr3L_10840001	0.29	D20-c2
537	chr3L	11119798	11119872	297	6584	6968	7	74	'4-3	68.57	9.1	0.7	intron	fd68A -	chr3L_7_11115001	chr3L_11115001	0.57	D20-c2
538	chr3L	11184231	11184313	297	6581	392	8	82	'5-3	66.45	6.1	1.1	intron	GlcAT-P -	chr3L_8_11180001	chr3L_11180001	0.62	D20-c2
539	chr3L	11272182	11272242	412	491	7074	9	60	'5-4	62.57	5.1	1.5	intergenic	not near genes	chr3L_9_11270001	chr3L_11270001	0.56	D20-c2
540	chr3L	11322118	11322196	rover	6	347	7	78	'2-5	64.30	4.5	1.3	intergenic	CG6168 -	chr3L_7_11320001	chr3L_11320001	0.29	D20-c2
541	chr3L	11322126	11322187	297	16	387	9	61	'4-5	70.99	4.6	1.6	intergenic	CG6168 -	chr3L_9_11320001	chr3L_11320001	0.44	D20-c2
542	chr3L	11350212	11350247	rover	7090	175	12	35	'5-7	60.23	9.1	1.2	intergenic	CR45251 -	chr3L_12_11350001	chr3L_11350001	0.42	D20-c2
543	chr3L	11350434	11350507	297	394	6588	9	73	'5-4	67.11	8.0	1.0	intergenic	not near genes	chr3L_9_11350001	chr3L_11350001	0.56	D20-c2
544	chr3L	11521307	11521375	17.6	485	3	13	68	'5-8	65.89	2.6	3.6	3` UTR	CG11714 -	chr3L_13_11520001	chr3L_11520001	0.38	D20-c2
545	chr3L	11544461	11544531	297	6580	6962	6	70	'1-5	67.11	1.1	2.9	intron	Mob2 -	chr3L_6_11540001	chr3L_11540001	0.17	D20-c2
546	chr3L	11581115	11581163	Juan	4191	4023	7	48	'2-5	62.59	3.0	1.8	intergenic	CG43391 -,CG33269 -	chr3L_7_11580001	chr3L_11580001	0.29	D20-c2
547	chr3L	11660021	11660079	297	6599	387	7	58	'1-6	65.36	6.9	0.9	intron	CG32085 -	chr3L_7_11660001	chr3L_11660001	0.14	D20-c2
548	chr3L	11682224	11682305	297	390	6580	9	81	'4-5	68.42	8.4	1.0	intron	TfIIEalpha +	chr3L_9_11680001	chr3L_11680001	0.44	D20-c2
549	chr3L	11819140	11819198	17.6	6941	7407	8	58	'5-3	67.27	2.8	2.1	intron	CG5946 -	chr3L_8_11815001	chr3L_11815001	0.62	D20-c2
550	chr3L	11877816	11877903	3S18	344	5764	19	87	'3-16	64.54	4.8	3.3	intron	CG44837 -	chr3L_19_11875001	chr3L_11875001	0.16	D20-c2
551	chr3L	12075681	12075741	pogo	25	2100	15	60	'2-13	65.71	3.4	3.4	intron	Sema-5c -	chr3L_15_12075001	chr3L_12075001	0.13	D20-c2
552	chr3L	12258775	12258804	Doc	32	3	7	29	'4-3	63.08	8.1	0.8	intron	app -	chr3L_7_12255001	chr3L_12255001	0.57	D20-c2
553	chr3L	12287354	12287438	blood	7389	7010	32	84	'17-15	64.46	6.6	4.2	intergenic	not near genes	chr3L_32_12285001	chr3L_12285001	0.53	D20-c2
554	chr3L	12548406	12548429	flea	4762	4785	4	23	'1-3	69.73	6.8	0.5	intron	sowah -	chr3L_4_12545001	chr3L_12545001	0.25	D20-c2
555	chr3L	12701094	12701120	hobo	7	33	4	26	'2-2	62.83	15.6	0.2	intron	mirr +	chr3L_4_12700001	chr3L_12700001	0.50	D20-c2
556	chr3L	12744851	12744899	297	6956	17	6	48	'4-2	69.30	3.2	1.4	exon	CG32112 +	chr3L_6_12740001	chr3L_12740001	0.67	D20-c2
557	chr3L	12828144	12828224	pogo	2	2097	17	80	'8-9	65.17	5.4	2.7	intron	CG10960 -	chr3L_17_12825001	chr3L_12825001	0.47	D20-c2
558	chr3L	12989885	12989957	rover	348	6964	10	72	'8-2	69.22	6.2	1.4	intergenic	not near genes	chr3L_10_12985001	chr3L_12985001	0.80	D20-c2
559	chr3L	13144438	13144516	297	11	1	8	78	'5-3	67.40	3.7	1.7	intergenic	not near genes	chr3L_8_13140001	chr3L_13140001	0.62	D20-c2
560	chr3L	13213285	13213363	412	490	2	18	78	'9-9	67.33	4.6	3.2	intergenic	not near genes	chr3L_18_13210001	chr3L_13210001	0.50	D20-c2
561	chr3L	13271101	13271156	micropia	21	448	7	55	'4-3	66.32	8.7	0.7	intron	caps +	chr3L_7_13270001	chr3L_13270001	0.57	D20-c2
562	chr3L	13363308	13363354	roo	9037	1	8	46	'3-5	70.40	7.2	1.0	intergenic	not near genes	chr3L_8_13360001	chr3L_13360001	0.38	D20-c2
563	chr3L	13688735	13688809	Stalker4	5	405	19	74	'5-14	59.06	4.2	3.7	intron	bru-3 -	chr3L_19_13685001	chr3L_13685001	0.26	D20-c2
564	chr3L	13757748	13757829	roo	1	408	31	81	'20-11	66.92	2.3	9.4	intron	bru-3 -	chr3L_31_13755001	chr3L_13755001	0.65	D20-c2
565	chr3L	13953175	13953241	297	394	6599	6	66	'3-3	68.20	5.9	0.9	intron	CG32137 +	chr3L_6_13950001	chr3L_13950001	0.50	D20-c2
566	chr3L	13983588	13983662	297	6970	5	8	74	'2-6	68.55	6.8	1.0	exon	CG17364 -	chr3L_8_13980001	chr3L_13980001	0.25	D20-c2
567	chr3L	13994618	13994695	297	3	394	6	77	'3-3	71.05	7.8	0.7	intron	26-29-p +	chr3L_6_13990001	chr3L_13990001	0.50	D20-c2
568	chr3L	13996861	13996928	gtwin	6914	456	6	67	'1-5	64.04	0.0	6.0	intergenic	26-29-p +,CG17361 +	chr3L_6_13995001	chr3L_13995001	0.17	D20-c2
569	chr3L	14049976	14050054	pogo	2	2094	15	78	'5-10	64.18	2.2	4.7	intergenic	blue -	chr3L_15_14045001	chr3L_14045001	0.33	D20-c2
570	chr3L	14260341	14260413	297	390	6587	4	72	'3-1	69.74	5.2	0.6	intergenic	not near genes	chr3L_4_14260001	chr3L_14260001	0.75	D20-c2
571	chr3L	14400556	14400634	copia	1	252	4	78	'2-2	59.87	1.8	1.4	intergenic	CG3868 -	chr3L_4_14400001	chr3L_14400001	0.50	D20-c2
572	chr3L	14407166	14407207	297	380	6610	6	41	'4-2	67.24	3.3	1.4	intron	stwl -	chr3L_6_14405001	chr3L_14405001	0.67	D20-c2
573	chr3L	14480720	14480768	297	6611	6969	5	48	'1-4	68.95	4.9	0.8	intron	bbg -	chr3L_5_14480001	chr3L_14480001	0.20	D20-c2
574	chr3L	14486978	14487002	rover	317	341	4	24	'2-2	63.67	6.7	0.5	intron	bbg -	chr3L_4_14485001	chr3L_14485001	0.50	D20-c2
575	chr3L	15035138	15035209	pogo	2087	1	9	71	'3-6	74.56	4.6	1.6	intron	Sytbeta -	chr3L_9_15035001	chr3L_15035001	0.33	D20-c2
576	chr3L	15099575	15099623	G4	3817	3803	5	48	'4-1	60.79	3.8	1.0	intron	CTPsyn +	chr3L_5_15095001	chr3L_15095001	0.80	D20-c2
577	chr3L	15461365	15461422	flea	257	4784	5	57	'4-1	58.60	6.4	0.7	intergenic	not near genes	chr3L_5_15460001	chr3L_15460001	0.80	D20-c2
578	chr3L	15466968	15467058	Tc3	238	316	5	90	'2-3	76.33	4.0	1.0	intergenic	not near genes	chr3L_5_15465001	chr3L_15465001	0.40	D20-c2
579	chr3L	15514293	15514377	roo	407	8662	17	84	'12-5	66.49	2.7	4.6	intergenic	not near genes	chr3L_17_15510001	chr3L_15510001	0.71	D20-c2
580	chr3L	15532280	15532350	297	6592	6972	4	70	'1-3	70.72	2.9	1.0	intergenic	not near genes	chr3L_4_15530001	chr3L_15530001	0.25	D20-c2
581	chr3L	15723912	15723947	jockey	4703	4668	11	35	'5-6	66.15	4.7	1.9	intron	comm -	chr3L_11_15720001	chr3L_15720001	0.45	D20-c2
582	chr3L	15792005	15792083	Tabor	6	486	28	78	'7-21	61.96	4.5	5.1	intergenic	not near genes	chr3L_28_15790001	chr3L_15790001	0.25	D20-c2
583	chr3L	15851272	15851350	3S18	336	5765	5	78	'1-4	66.32	3.3	1.2	3` UTR	pHCl -	chr3L_5_15850001	chr3L_15850001	0.20	D20-c2
584	chr3L	15861797	15861874	flea	247	4755	15	77	'3-12	67.87	4.8	2.6	intron	pHCl -	chr3L_15_15860001	chr3L_15860001	0.20	D20-c2
585	chr3L	15938988	15939064	copia	249	4869	9	76	'4-5	64.91	4.8	1.6	intron	Pka-C3 -	chr3L_9_15935001	chr3L_15935001	0.44	D20-c2
586	chr3L	16004144	16004227	rover	6951	7297	11	83	'7-4	67.22	9.9	1.0	intron	CG5830 -	chr3L_11_16000001	chr3L_16000001	0.64	D20-c2
587	chr3L	16025947	16025996	diver	6087	8	6	49	'1-5	60.53	1.5	2.4	intron	Notum +	chr3L_6_16025001	chr3L_16025001	0.17	D20-c2
588	chr3L	16292541	16292616	jockey	4618	4989	23	75	'11-12	62.63	5.4	3.6	intergenic	not near genes	chr3L_23_16290001	chr3L_16290001	0.48	D20-c2
589	chr3L	16450023	16450113	pogo	20	2093	5	90	'3-2	58.42	2.0	1.7	intron,intron	CG33158 +,dsx-c73A -	chr3L_5_16450001	chr3L_16450001	0.60	D20-c2
590	chr3L	16549211	16549260	Stalker2	7247	7637	12	49	'5-7	67.04	6.0	1.7	intergenic	not near genes	chr3L_12_16545001	chr3L_16545001	0.42	D20-c2
591	chr3L	16563527	16563597	Stalker2	396	7254	10	70	'4-6	63.84	3.1	2.4	intergenic	Mipp1 -	chr3L_10_16560001	chr3L_16560001	0.40	D20-c2
592	chr3L	16644449	16644514	roo	15	406	8	65	'4-4	65.62	8.4	0.9	intron	Abl -	chr3L_8_16640001	chr3L_16640001	0.50	D20-c2
593	chr3L	16731342	16731418	297	6585	6971	8	76	'5-3	67.93	4.2	1.5	intergenic	not near genes	chr3L_8_16730001	chr3L_16730001	0.62	D20-c2
594	chr3L	16936288	16936342	I-element	1	5343	6	54	'5-1	62.48	2.9	1.5	intergenic	not near genes	chr3L_6_16935001	chr3L_16935001	0.83	D20-c2
595	chr3L	16938930	16939016	roo	8663	411	14	86	'5-9	63.16	4.8	2.4	exon	CG13022 -	chr3L_14_16935001	chr3L_16935001	0.36	D20-c2
596	chr3L	16970985	16971048	pogo	2099	21	5	63	'4-1	67.37	3.3	1.2	intron	Exn +	chr3L_5_16970001	chr3L_16970001	0.80	D20-c2
597	chr3L	17004752	17004825	297	6581	6964	5	73	'2-3	69.65	8.0	0.6	intron	CG3764 -	chr3L_5_17000001	chr3L_17000001	0.40	D20-c2
598	chr3L	17133807	17133881	jockey	4756	4987	9	74	'2-7	62.87	4.2	1.7	intron	Rbp6 -	chr3L_9_17130001	chr3L_17130001	0.22	D20-c2
599	chr3L	17165011	17165059	copia	20	241	6	48	'2-4	64.69	1.9	2.1	intron	Rbp6 -	chr3L_6_17165001	chr3L_17165001	0.33	D20-c2
600	chr3L	17393930	17393950	rover	23	3	8	20	'5-3	61.18	10.8	0.7	intergenic	not near genes	chr3L_8_17390001	chr3L_17390001	0.62	D20-c2
601	chr3L	17488646	17488706	copia	4884	248	6	60	'4-2	66.01	2.5	1.7	intron	Oatp74D +	chr3L_6_17485001	chr3L_17485001	0.67	D20-c2
602	chr3L	17490545	17490615	297	387	7	7	70	'3-4	68.33	4.0	1.4	intron	Oatp74D +	chr3L_7_17490001	chr3L_17490001	0.43	D20-c2
603	chr3L	17655644	17655712	flea	4771	254	11	68	'3-8	66.10	6.4	1.5	3` UTR	CG7484 +	chr3L_11_17655001	chr3L_17655001	0.27	D20-c2
604	chr3L	17776805	17776884	blood	373	7011	7	79	'3-4	63.45	4.1	1.4	intergenic	not near genes	chr3L_7_17775001	chr3L_17775001	0.43	D20-c2
605	chr3L	17970940	17971021	copia	258	4873	5	81	'2-3	65.26	11.2	0.4	intron	Eip75B -	chr3L_5_17970001	chr3L_17970001	0.40	D20-c2
606	chr3L	18041856	18041907	rover	7289	9	4	51	'2-2	66.53	4.9	0.7	intron	Eip75B -	chr3L_4_18040001	chr3L_18040001	0.50	D20-c2
607	chr3L	18121734	18121809	hobo	2	2707	6	75	'3-3	67.14	6.4	0.8	exon	CG42853 -	chr3L_6_18120001	chr3L_18120001	0.50	D20-c2
608	chr3L	18225005	18225035	3S18	343	6078	6	30	'4-2	66.89	9.1	0.6	intergenic	not near genes	chr3L_6_18225001	chr3L_18225001	0.67	D20-c2
609	chr3L	18228353	18228430	Bari1	10	1707	15	77	'5-10	64.44	3.3	3.5	intergenic	not near genes	chr3L_15_18225001	chr3L_18225001	0.33	D20-c2
610	chr3L	18241890	18241971	297	394	6584	5	81	'3-2	71.24	5.2	0.8	intergenic	not near genes	chr3L_5_18240001	chr3L_18240001	0.60	D20-c2
611	chr3L	18251773	18251894	297	2	393	6	121	'3-3	57.68	2.6	1.7	intergenic	CheA75a +	chr3L_6_18250001	chr3L_18250001	0.50	D20-c2
612	chr3L	18665268	18665349	flea	5010	4755	13	81	'5-8	69.03	5.2	2.1	intron	MYPT-75D +	chr3L_13_18665001	chr3L_18665001	0.38	D20-c2
613	chr3L	18816424	18816496	S-element	5	1707	9	72	'6-3	65.21	3.6	2.0	intron	CG14073 -	chr3L_9_18815001	chr3L_18815001	0.67	D20-c2
614	chr3L	18958737	18958799	roo	8680	403	5	62	'3-2	67.37	3.2	1.2	intergenic	not near genes	chr3L_5_18955001	chr3L_18955001	0.60	D20-c2
615	chr3L	19003416	19003474	Tabor	3	7302	10	58	'6-4	63.42	8.1	1.1	intergenic	CG18136 -,nkd -	chr3L_10_19000001	chr3L_19000001	0.60	D20-c2
616	chr3L	19025723	19025763	Max-element	34	8262	14	40	'5-9	69.34	8.8	1.4	intron	nkd -	chr3L_14_19025001	chr3L_19025001	0.36	D20-c2
617	chr3L	19029127	19029206	3S18	5766	6103	13	79	'8-5	68.21	7.4	1.5	intron	nkd -	chr3L_13_19025001	chr3L_19025001	0.62	D20-c2
618	chr3L	19029186	19029264	mdg3	5256	245	5	78	'3-2	62.11	6.1	0.7	intron	nkd -	chr3L_5_19025001	chr3L_19025001	0.60	D20-c2
619	chr3L	19035054	19035105	rover	329	15	6	51	'2-4	73.02	6.1	0.8	intron	nkd -	chr3L_6_19035001	chr3L_19035001	0.33	D20-c2
620	chr3L	19036453	19036526	297	6580	394	9	73	'5-4	64.18	4.2	1.7	intron	nkd -	chr3L_9_19035001	chr3L_19035001	0.56	D20-c2
621	chr3L	19040435	19040510	297	384	6580	5	75	'1-4	65.00	4.1	1.0	intron	nkd -	chr3L_5_19040001	chr3L_19040001	0.20	D20-c2
622	chr3L	19081696	19081769	297	9	6973	6	73	'3-3	67.98	5.6	0.9	intron	Mkp3 -	chr3L_6_19080001	chr3L_19080001	0.50	D20-c2
623	chr3L	19102254	19102276	17.6	470	492	6	22	'2-4	67.54	6.7	0.8	intergenic	not near genes	chr3L_6_19100001	chr3L_19100001	0.33	D20-c2
624	chr3L	19339395	19339429	Tc1	35	1	7	34	'4-3	65.98	3.2	1.7	intergenic	not near genes	chr3L_7_19335001	chr3L_19335001	0.57	D20-c2
625	chr3L	19395160	19395237	297	6585	391	6	77	'3-3	64.48	6.1	0.8	intron	CG32206 -	chr3L_6_19395001	chr3L_19395001	0.50	D20-c2
626	chr3L	19463063	19463091	Doc	3	31	8	28	'3-5	63.52	3.5	1.8	intergenic	not near genes	chr3L_8_19460001	chr3L_19460001	0.38	D20-c2
627	chr3L	19564831	19564902	297	6587	6968	10	71	'5-5	70.34	6.5	1.3	intergenic	mir-9a +	chr3L_10_19560001	chr3L_19560001	0.50	D20-c2
628	chr3L	19649903	19649973	297	388	8	10	70	'7-3	65.26	9.2	1.0	intergenic	Oat -	chr3L_10_19645001	chr3L_19645001	0.70	D20-c2
629	chr3L	19788120	19788188	FB	5	6	8	68	'5-3	60.69	2.8	2.1	intron,intron	CG42637 -,Gyc76C -	chr3L_8_19785001	chr3L_19785001	0.62	D20-c2
630	chr3L	20150379	20150463	mdg3	248	5253	9	84	'2-7	62.43	4.3	1.7	3` UTR	CG42674 -	chr3L_9_20150001	chr3L_20150001	0.22	D20-c2
631	chr3L	20224146	20224224	Chimpo	185	3	26	78	'11-15	67.91	6.8	3.3	intron	CG17147 +	chr3L_26_20220001	chr3L_20220001	0.42	D20-c2
632	chr3L	20255390	20255431	Stalker4	389	18	5	41	'3-2	61.37	4.0	1.0	intron	rdgC +	chr3L_5_20255001	chr3L_20255001	0.60	D20-c2
633	chr3L	20272027	20272106	297	6581	6586	15	79	'10-5	66.32	5.0	2.5	intron	gogo -	chr3L_15_20270001	chr3L_20270001	0.67	D20-c2
634	chr3L	20361688	20361770	pogo	2099	2	24	82	'10-14	66.21	4.4	4.4	intergenic	DNApol-alpha60 -,Toll-9 -	chr3L_24_20360001	chr3L_20360001	0.42	D20-c2
635	chr3L	20829686	20829757	micropia	16	459	9	71	'4-5	69.49	6.1	1.3	intron	Pka-R1 +	chr3L_9_20825001	chr3L_20825001	0.44	D20-c2
636	chr3L	20844039	20844115	rover	6951	339	4	76	'3-1	66.45	4.2	0.8	intron	CG11456 +	chr3L_4_20840001	chr3L_20840001	0.75	D20-c2
637	chr3L	20867653	20867732	mdg3	5257	247	9	79	'6-3	63.99	7.2	1.1	intron	CG32432 -	chr3L_9_20865001	chr3L_20865001	0.67	D20-c2
638	chr3L	21187410	21187486	hopper	1412	1411	7	76	'5-2	65.04	4.4	1.3	intron	CG42337 -	chr3L_7_21185001	chr3L_21185001	0.71	D20-c2
639	chr3L	21194672	21194742	mdg3	239	5258	11	70	'3-8	61.00	9.8	1.0	intergenic	park -	chr3L_11_21190001	chr3L_21190001	0.27	D20-c2
640	chr3L	21359972	21360001	jockey	6	35	10	29	'7-3	65.04	8.9	1.0	intergenic	CG32437 +,CG32440 +	chr3L_10_21355001	chr3L_21355001	0.70	D20-c2
641	chr3L	21989558	21989630	Stalker2	12	404	18	72	'5-13	60.05	8.4	1.9	intergenic	not near genes	chr3L_18_21985001	chr3L_21985001	0.28	D20-c2
642	chr3L	21998312	21998390	copia	5	256	9	78	'4-5	64.33	5.5	1.4	intergenic	not near genes	chr3L_9_21995001	chr3L_21995001	0.44	D20-c2
643	chr3L	22123484	22123517	mdg3	33	5252	7	33	'1-6	66.11	9.9	0.6	intergenic	not near genes	chr3L_7_22120001	chr3L_22120001	0.14	D20-c2
644	chr3L	22153893	22153973	roo	8662	404	14	80	'6-8	63.11	5.2	2.3	intron	olf413 +	chr3L_14_22150001	chr3L_22150001	0.43	D20-c2
645	chr3L	22243284	22243360	297	6966	6580	4	76	'2-2	67.11	4.1	0.8	3` UTR	olf413 +	chr3L_4_22240001	chr3L_22240001	0.50	D20-c2
646	chr3L	22283772	22283854	roo	8662	9069	12	82	'8-4	67.76	5.9	1.7	3` UTR	srpk79D +	chr3L_12_22280001	chr3L_22280001	0.67	D20-c2
647	chr3L	22399749	22399803	FB	16	9	6	54	'1-5	58.48	5.1	1.0	intron	Ten-m -	chr3L_6_22395001	chr3L_22395001	0.17	D20-c2
648	chr3L	22437243	22437316	3S18	334	5768	8	73	'4-4	60.52	8.4	0.9	intergenic	not near genes	chr3L_8_22435001	chr3L_22435001	0.50	D20-c2
649	chr3L	22543277	22543359	micropia	456	2	8	82	'3-5	70.23	4.4	1.5	intergenic	not near genes	chr3L_8_22540001	chr3L_22540001	0.38	D20-c2
650	chr3L	22635686	22635760	hopper	1411	1410	4	74	'3-1	63.82	5.4	0.6	intron	CG14459 -	chr3L_4_22635001	chr3L_22635001	0.75	D20-c2
651	chr3L	22650718	22650794	blood	7011	8	19	76	'8-11	60.66	7.9	2.1	intergenic	not near genes	chr3L_19_22650001	chr3L_22650001	0.42	D20-c2
652	chr3L	22826405	22826458	micropia	6	5434	7	53	'5-2	65.33	7.1	0.9	intron	jim -	chr3L_7_22825001	chr3L_22825001	0.71	D20-c2
653	chr3L	22833376	22833446	copia	250	4876	4	70	'3-1	62.50	3.2	1.0	5` UTR	jim -	chr3L_4_22830001	chr3L_22830001	0.75	D20-c2
654	chr3L	22908773	22908791	3S18	5798	5780	6	18	'3-3	58.60	7.7	0.7	intergenic	not near genes	chr3L_6_22905001	chr3L_22905001	0.50	D20-c2
655	chr3L	22984746	22984828	opus	499	491	9	82	'5-4	64.91	3.6	2.0	intergenic	not near genes	chr3L_9_22980001	chr3L_22980001	0.56	D20-c2
656	chr3L	23146485	23146512	1360	5	32	8	27	'5-3	62.78	10.2	0.7	intergenic	not near genes	chr3L_8_23145001	chr3L_23145001	0.62	D20-c2
657	chr3L	23320036	23320110	mdg3	247	5262	7	74	'3-4	65.60	4.2	1.3	intron	alpha-Cat -	chr3L_7_23320001	chr3L_23320001	0.43	D20-c2
658	chr3L	23697991	23698023	opus	7470	499	5	32	'2-3	66.58	9.0	0.5	intergenic	not near genes	chr3L_5_23695001	chr3L_23695001	0.40	D20-c2
659	chr3L	24253470	24253505	Rt1b	4980	5015	8	35	'6-2	65.34	6.7	1.0	intron	Snap25 +	chr3L_8_24250001	chr3L_24250001	0.75	D20-c2
660	chr3L	24304157	24304236	Transpac	6	311	4	79	'3-1	66.56	2.1	1.3	intergenic	not near genes	chr3L_4_24300001	chr3L_24300001	0.75	D20-c2
661	chr3L	25119760	25119841	Stalker2	405	7252	16	81	'10-6	64.64	8.9	1.6	intergenic	not near genes	chr3L_16_25115001	chr3L_25115001	0.62	D20-c2
662	chr3L	27147787	27147860	roo	404	8669	11	73	'4-7	67.34	7.5	1.3	intron	vtd +	chr3L_11_27145001	chr3L_27145001	0.36	D20-c2
663	chr3L	27269494	27269570	297	6580	385	10	76	'5-5	67.63	8.3	1.1	intergenic	not near genes	chr3L_10_27265001	chr3L_27265001	0.50	D20-c2
664	chr3L	27287257	27287307	Ivk	5362	2	11	50	'4-7	59.39	8.4	1.2	intron	Dbp80 +	chr3L_11_27285001	chr3L_27285001	0.36	D20-c2
665	chr3R	433125	433143	1731	297	315	5	18	'3-2	62.90	7.0	0.6	intergenic	not near genes	chr3R_5_430001	chr3R_430001	0.60	D20-c2
666	chr3R	895500	895570	roo	409	8677	12	70	'8-4	66.30	5.6	1.8	intron	CG42621 +	chr3R_12_895001	chr3R_895001	0.67	D20-c2
667	chr3R	1047966	1048050	Stalker2	7651	7247	20	84	'7-13	63.99	2.8	5.3	intron	CG15831 +	chr3R_20_1045001	chr3R_1045001	0.35	D20-c2
668	chr3R	1576018	1576036	297	6588	18	4	18	'2-2	64.99	2.9	1.0	intergenic	not near genes	chr3R_4_1575001	chr3R_1575001	0.50	D20-c2
669	chr3R	2533850	2533932	gypsy8	4816	4817	9	82	'1-8	52.78	15.4	0.5	intergenic	not near genes	chr3R_9_2530001	chr3R_2530001	0.11	D20-c2
670	chr3R	4830514	4830592	mdg3	246	5257	9	78	'7-2	69.75	7.1	1.1	intergenic	CG14658 -,CG14659 -	chr3R_9_4830001	chr3R_4830001	0.78	D20-c2
671	chr3R	4949339	4949421	297	1	6974	13	82	'5-8	70.45	5.4	2.0	3` UTR	UbcD6 -	chr3R_13_4945001	chr3R_4945001	0.38	D20-c2
672	chr3R	4982404	4982468	copia	7	245	10	64	'7-3	68.50	6.9	1.3	intron,5` UTR	CG14662 -,CR43478 +	chr3R_10_4980001	chr3R_4980001	0.70	D20-c2
673	chr3R	5036964	5036980	297	382	6947	4	16	'2-2	71.05	11.5	0.3	intergenic	not near genes	chr3R_4_5035001	chr3R_5035001	0.50	D20-c2
674	chr3R	5045196	5045258	rover	331	6957	7	62	'2-5	67.48	15.4	0.4	intergenic	CR43635 -	chr3R_7_5045001	chr3R_5045001	0.29	D20-c2
675	chr3R	5188451	5188537	297	395	6580	5	86	'2-3	69.21	4.1	1.0	intron	cno -	chr3R_5_5185001	chr3R_5185001	0.40	D20-c2
676	chr3R	5345901	5345977	rover	344	6956	5	76	'3-2	63.16	11.7	0.4	intron	mtd -	chr3R_5_5345001	chr3R_5345001	0.60	D20-c2
677	chr3R	5367366	5367444	copia	4870	252	5	78	'3-2	67.11	3.0	1.2	intron	Cerk -	chr3R_5_5365001	chr3R_5365001	0.60	D20-c2
678	chr3R	5396628	5396697	flea	4757	241	6	69	'4-2	71.27	7.3	0.7	3` UTR	CG1172 +	chr3R_6_5395001	chr3R_5395001	0.67	D20-c2
679	chr3R	5423986	5424073	roo	411	8662	30	87	'12-18	69.58	5.7	4.5	intron	CG14669 +	chr3R_30_5420001	chr3R_5420001	0.40	D20-c2
680	chr3R	5527032	5527115	diver	223	5886	10	83	'9-1	65.13	3.3	2.3	intron	Itp-r83A +	chr3R_10_5525001	chr3R_5525001	0.90	D20-c2
681	chr3R	5786147	5786228	gypsy	463	6991	29	81	'19-10	60.37	4.6	5.2	intron	kat-60L1 +	chr3R_29_5785001	chr3R_5785001	0.66	D20-c2
682	chr3R	5804961	5804992	Doc	62	31	9	31	'6-3	62.41	3.9	1.8	intron	CG11000 +	chr3R_9_5800001	chr3R_5800001	0.67	D20-c2
683	chr3R	6080929	6080961	jockey	4817	4849	13	32	'8-5	63.40	4.6	2.3	intergenic	not near genes	chr3R_13_6080001	chr3R_6080001	0.62	D20-c2
684	chr3R	6517929	6518004	mdg3	246	5260	9	75	'5-4	60.23	4.1	1.8	intergenic	not near genes	chr3R_9_6515001	chr3R_6515001	0.56	D20-c2
685	chr3R	6975576	6975604	rover	7245	7216	5	28	'3-2	60.72	9.7	0.5	intron	Antp -	chr3R_5_6975001	chr3R_6975001	0.60	D20-c2
686	chr3R	7113754	7113827	micropia	4964	453	5	73	'2-3	62.90	4.4	0.9	intron,3` UTR	Alh -,Mlp84B -	chr3R_5_7110001	chr3R_7110001	0.40	D20-c2
687	chr3R	7237031	7237110	roo	8664	405	16	79	'11-5	69.39	4.3	3.0	intron	CG14608 +	chr3R_16_7235001	chr3R_7235001	0.69	D20-c2
688	chr3R	7370070	7370145	flea	4761	251	4	75	'1-3	69.41	5.1	0.7	intergenic	not near genes	chr3R_4_7370001	chr3R_7370001	0.25	D20-c2
689	chr3R	7490762	7490830	rover	334	3	6	68	'3-3	65.35	4.3	1.1	intron	alpha-Est10 -	chr3R_6_7490001	chr3R_7490001	0.50	D20-c2
690	chr3R	7515378	7515439	297	6580	381	5	61	'3-2	71.05	6.6	0.7	5` UTR	alpha-Est8 -	chr3R_5_7515001	chr3R_7515001	0.60	D20-c2
691	chr3R	7671763	7671839	Tabor	482	3	15	76	'7-8	64.06	4.2	2.9	intron	Nlg1 +	chr3R_15_7670001	chr3R_7670001	0.47	D20-c2
692	chr3R	7689420	7689503	mdg3	5252	5498	18	83	'9-9	65.94	4.5	3.3	intron	Nlg1 +	chr3R_18_7685001	chr3R_7685001	0.50	D20-c2
693	chr3R	7886196	7886220	jockey	7	31	8	24	'2-6	59.24	5.1	1.3	intron	CG17816 -	chr3R_8_7885001	chr3R_7885001	0.25	D20-c2
694	chr3R	7967534	7967560	jockey	4611	4637	11	26	'5-6	60.05	6.1	1.5	intergenic	dsx -	chr3R_11_7965001	chr3R_7965001	0.45	D20-c2
695	chr3R	8205284	8205359	opus	496	3	18	75	'10-8	67.06	6.4	2.4	intergenic	CheA84a -	chr3R_18_8205001	chr3R_8205001	0.56	D20-c2
696	chr3R	8207069	8207122	flea	4768	4995	4	53	'3-1	66.12	5.5	0.6	intergenic	not near genes	chr3R_4_8205001	chr3R_8205001	0.75	D20-c2
697	chr3R	8441088	8441174	roo	8664	412	22	86	'9-13	71.93	4.5	4.0	intron	CG45263 -	chr3R_22_8440001	chr3R_8440001	0.41	D20-c2
698	chr3R	8552515	8552597	opus	1	497	22	82	'8-14	66.93	8.6	2.3	intergenic	Or85d +	chr3R_22_8550001	chr3R_8550001	0.36	D20-c2
699	chr3R	8596608	8596696	mdg3	250	5251	6	88	'1-5	67.53	6.4	0.8	intron	5-HT2B +	chr3R_6_8595001	chr3R_8595001	0.17	D20-c2
700	chr3R	8618761	8618849	roo	8663	413	12	88	'4-8	67.49	1.2	5.5	intron	5-HT2B +	chr3R_12_8615001	chr3R_8615001	0.33	D20-c2
701	chr3R	8645677	8645743	Max-element	8236	285	18	66	'13-5	61.87	5.9	2.6	intergenic	Cyp313b1 -,Mkk4 -	chr3R_18_8645001	chr3R_8645001	0.72	D20-c2
702	chr3R	8744005	8744069	mdg1	409	7045	6	64	'3-3	62.50	6.2	0.8	intron	CG9801 -	chr3R_6_8740001	chr3R_8740001	0.50	D20-c2
703	chr3R	8811172	8811226	1360	6	3368	17	54	'8-9	72.43	3.7	3.6	intron	CG9837 -	chr3R_17_8810001	chr3R_8810001	0.47	D20-c2
704	chr3R	8860919	8860977	rover	6968	338	5	58	'1-4	64.47	4.3	0.9	intron	pyd -	chr3R_5_8860001	chr3R_8860001	0.20	D20-c2
705	chr3R	8867246	8867318	412	488	6	16	72	'7-9	66.45	3.8	3.3	intron	pyd -	chr3R_16_8865001	chr3R_8865001	0.44	D20-c2
706	chr3R	8888131	8888215	297	6580	6974	7	84	'3-4	67.61	5.2	1.1	intron	pyd -	chr3R_7_8885001	chr3R_8885001	0.43	D20-c2
707	chr3R	9026487	9026545	297	386	6599	4	58	'2-2	70.06	7.4	0.5	intron	neur -	chr3R_4_9025001	chr3R_9025001	0.50	D20-c2
708	chr3R	9192376	9192444	copia	244	4872	13	68	'8-5	68.37	3.1	3.2	intron	pum -	chr3R_13_9190001	chr3R_9190001	0.62	D20-c2
709	chr3R	9343108	9343189	297	395	4	10	81	'6-4	72.63	5.6	1.5	intron	CG45050 +	chr3R_10_9340001	chr3R_9340001	0.60	D20-c2
710	chr3R	9344404	9344455	copia	4896	251	6	51	'2-4	66.01	5.7	0.9	intron	CG45050 +	chr3R_6_9340001	chr3R_9340001	0.33	D20-c2
711	chr3R	9350502	9350560	FB	19	2	7	58	'2-5	66.73	2.2	2.2	intron	CG45050 +	chr3R_7_9350001	chr3R_9350001	0.29	D20-c2
712	chr3R	9461789	9461855	297	10	6967	4	66	'1-3	68.09	6.6	0.5	3` UTR	CG16779 -	chr3R_4_9460001	chr3R_9460001	0.25	D20-c2
713	chr3R	9594344	9594418	FB	2	3	12	74	'7-5	63.27	3.7	2.6	intron	CG8312 +	chr3R_12_9590001	chr3R_9590001	0.58	D20-c2
714	chr3R	9600893	9600965	297	6590	391	7	72	'3-4	63.91	2.4	2.1	intron	CG8312 +	chr3R_7_9600001	chr3R_9600001	0.43	D20-c2
715	chr3R	9617881	9617955	copia	4880	258	5	74	'3-2	63.42	4.0	1.0	intron	CG8312 +	chr3R_5_9615001	chr3R_9615001	0.60	D20-c2
716	chr3R	9931406	9931463	rover	343	23	6	57	'4-2	60.95	6.0	0.9	intron	Glut4EF +	chr3R_6_9930001	chr3R_9930001	0.67	D20-c2
717	chr3R	10086568	10086638	copia	4876	250	8	70	'5-3	61.02	5.8	1.2	intron	CR45054 +	chr3R_8_10085001	chr3R_10085001	0.62	D20-c2
718	chr3R	10087890	10087970	copia	2	255	10	80	'3-7	64.21	7.0	1.2	intron	CR45054 +	chr3R_10_10085001	chr3R_10085001	0.30	D20-c2
719	chr3R	10096377	10096459	297	6584	395	8	82	'4-4	64.36	8.3	0.9	5` UTR	CR43459 +	chr3R_8_10095001	chr3R_10095001	0.50	D20-c2
720	chr3R	10147818	10147905	copia	259	4868	7	87	'3-4	70.87	5.9	1.0	intron	Invadolysin +	chr3R_7_10145001	chr3R_10145001	0.43	D20-c2
721	chr3R	10226174	10226246	297	383	1	5	72	'1-4	67.10	8.8	0.5	intron	CG42795 +	chr3R_5_10225001	chr3R_10225001	0.20	D20-c2
722	chr3R	10229649	10229733	roo	8664	410	22	84	'10-12	68.66	5.3	3.5	intron	CG42795 +	chr3R_22_10225001	chr3R_10225001	0.45	D20-c2
723	chr3R	10636464	10636546	mdg3	5498	5253	12	82	'6-6	67.00	6.9	1.5	intergenic	not near genes	chr3R_12_10635001	chr3R_10635001	0.50	D20-c2
724	chr3R	10637482	10637565	roo	407	8662	27	83	'11-16	69.19	4.2	5.2	intergenic	not near genes	chr3R_27_10635001	chr3R_10635001	0.41	D20-c2
725	chr3R	10819342	10819406	copia	245	4877	12	64	'5-7	61.51	1.9	4.1	intergenic	not near genes	chr3R_12_10815001	chr3R_10815001	0.42	D20-c2
726	chr3R	10919887	10919965	Transpac	311	7	19	78	'8-11	64.10	2.7	5.1	intergenic	not near genes	chr3R_19_10915001	chr3R_10915001	0.42	D20-c2
727	chr3R	11022135	11022186	412	7529	7068	10	51	'5-5	66.97	2.6	2.8	intron	CG34114 +	chr3R_10_11020001	chr3R_11020001	0.50	D20-c2
728	chr3R	11136043	11136129	Stalker2	404	7246	26	86	'11-15	63.40	5.9	3.8	intergenic	not near genes	chr3R_26_11135001	chr3R_11135001	0.42	D20-c2
729	chr3R	11144979	11145054	copia	251	4872	13	75	'3-10	67.28	4.4	2.4	exon	CheA86a -	chr3R_13_11140001	chr3R_11140001	0.23	D20-c2
730	chr3R	11163024	11163105	mdg1	7459	2	12	81	'6-6	67.43	3.0	3.0	exon	CG4757 +	chr3R_12_11160001	chr3R_11160001	0.50	D20-c2
731	chr3R	11179255	11179328	roo	2	401	21	73	'10-11	67.54	5.8	3.1	intergenic	not near genes	chr3R_21_11175001	chr3R_11175001	0.48	D20-c2
732	chr3R	11183037	11183120	Stalker2	1	404	33	83	'13-20	61.14	6.5	4.4	intergenic	not near genes	chr3R_33_11180001	chr3R_11180001	0.39	D20-c2
733	chr3R	11277825	11277879	mdg1	7038	392	4	54	'3-1	68.09	6.8	0.5	3` UTR	CR31386 -	chr3R_4_11275001	chr3R_11275001	0.75	D20-c2
734	chr3R	11298336	11298398	mdg1	1	7440	15	62	'3-12	65.14	3.0	3.8	intron	CR31386 -	chr3R_15_11295001	chr3R_11295001	0.20	D20-c2
735	chr3R	11449205	11449240	Doc	264	298	11	35	'4-7	61.21	6.5	1.5	intron,intron	sals -,CG17230 +	chr3R_11_11445001	chr3R_11445001	0.36	D20-c2
736	chr3R	11472336	11472367	F-element	12	43	16	31	'11-5	61.92	8.6	1.7	intergenic	not near genes	chr3R_16_11470001	chr3R_11470001	0.69	D20-c2
737	chr3R	11568632	11568654	BS	4842	5080	6	22	'2-4	64.69	5.0	1.0	intergenic	not near genes	chr3R_6_11565001	chr3R_11565001	0.33	D20-c2
738	chr3R	11569013	11569034	jockey	4974	4995	10	21	'6-4	53.81	6.8	1.3	intergenic	Mrp4 +	chr3R_10_11565001	chr3R_11565001	0.60	D20-c2
739	chr3R	11593839	11593870	Doc	33	2	11	31	'5-6	63.47	7.8	1.2	intron	Jupiter -	chr3R_11_11590001	chr3R_11590001	0.45	D20-c2
740	chr3R	11604625	11604687	297	6971	6599	5	62	'4-1	66.32	2.5	1.4	intron	Jupiter -	chr3R_5_11600001	chr3R_11600001	0.80	D20-c2
741	chr3R	11656602	11656683	297	3	394	8	81	'4-4	67.88	3.5	1.8	5` UTR	CG42327 +	chr3R_8_11655001	chr3R_11655001	0.50	D20-c2
742	chr3R	11703575	11703662	Tirant	8106	399	32	87	'17-15	67.94	8.0	3.6	intergenic	I-t +	chr3R_32_11700001	chr3R_11700001	0.53	D20-c2
743	chr3R	11868955	11869004	297	1	6941	10	49	'6-4	70.04	9.8	0.9	5` UTR	CG6959 -	chr3R_10_11865001	chr3R_11865001	0.60	D20-c2
744	chr3R	11939712	11939784	micropia	5	449	6	72	'4-2	63.60	3.9	1.2	intron	Cad87A -	chr3R_6_11935001	chr3R_11935001	0.67	D20-c2
745	chr3R	11943444	11943509	297	6955	6580	7	65	'1-6	65.17	5.3	1.1	intron	Cad87A -	chr3R_7_11940001	chr3R_11940001	0.14	D20-c2
746	chr3R	11994249	11994328	micropia	458	7	9	79	'5-4	70.76	4.1	1.8	3` UTR	Tk -	chr3R_9_11990001	chr3R_11990001	0.56	D20-c2
747	chr3R	11994811	11994895	diver	225	5887	21	84	'10-11	64.09	3.4	4.8	intron	Tk -	chr3R_21_11990001	chr3R_11990001	0.48	D20-c2
748	chr3R	12099061	12099112	mdg1	7042	393	6	51	'3-3	67.98	4.9	1.0	intron	dpr17 +	chr3R_6_12095001	chr3R_12095001	0.50	D20-c2
749	chr3R	12360813	12360893	micropia	3	455	7	80	'5-2	72.37	5.5	1.1	intron	CG4115 +	chr3R_7_12360001	chr3R_12360001	0.71	D20-c2
750	chr3R	12367724	12367799	297	6970	4	13	75	'10-3	71.55	3.2	3.1	intergenic	GstD1 -,GstD9 -	chr3R_13_12365001	chr3R_12365001	0.77	D20-c2
751	chr3R	12369957	12370028	297	6592	6973	4	71	'3-1	65.13	5.9	0.6	intergenic	not near genes	chr3R_4_12365001	chr3R_12365001	0.75	D20-c2
752	chr3R	12451882	12451965	mdg3	249	5255	14	83	'7-7	63.29	11.3	1.1	intron	CG18549 +	chr3R_14_12450001	chr3R_12450001	0.50	D20-c2
753	chr3R	12624590	12624670	297	394	3	13	80	'9-4	69.97	7.0	1.6	3` UTR	Vha55 -	chr3R_13_12620001	chr3R_12620001	0.69	D20-c2
754	chr3R	12701378	12701461	rover	7296	6950	7	83	'1-6	67.99	8.1	0.8	intron	Past1 +	chr3R_7_12700001	chr3R_12700001	0.14	D20-c2
755	chr3R	12716635	12716721	297	6580	395	4	86	'3-1	70.40	7.7	0.5	intron	Men -	chr3R_4_12715001	chr3R_12715001	0.75	D20-c2
756	chr3R	13096045	13096106	3S18	5769	323	12	61	'10-2	66.23	8.0	1.3	intron	timeout +	chr3R_12_13095001	chr3R_13095001	0.83	D20-c2
757	chr3R	13398691	13398765	297	6968	6582	9	74	'3-6	64.16	3.7	1.9	3` UTR	CG9796 -	chr3R_9_13395001	chr3R_13395001	0.33	D20-c2
758	chr3R	13529088	13529163	mdg3	248	5262	10	75	'5-5	64.47	3.1	2.4	5` UTR	CG42778 -	chr3R_10_13525001	chr3R_13525001	0.50	D20-c2
759	chr3R	13633462	13633544	flea	5010	4754	7	82	'2-5	61.57	8.4	0.7	intron	CG10841 +	chr3R_7_13630001	chr3R_13630001	0.29	D20-c2
760	chr3R	13732299	13732362	hopper	3	1398	8	63	'5-3	61.70	4.9	1.4	intron	CG34383 +	chr3R_8_13730001	chr3R_13730001	0.62	D20-c2
761	chr3R	13760511	13760578	297	6970	6593	7	67	'6-1	71.55	8.7	0.7	intron	CG34383 +	chr3R_7_13760001	chr3R_13760001	0.86	D20-c2
762	chr3R	13773611	13773690	copia	254	2	12	79	'8-4	66.23	4.0	2.4	intron	CG9297 +	chr3R_12_13770001	chr3R_13770001	0.67	D20-c2
763	chr3R	13793805	13793890	mdg3	5252	248	10	85	'9-1	67.37	8.5	1.1	intergenic	not near genes	chr3R_10_13790001	chr3R_13790001	0.90	D20-c2
764	chr3R	13812175	13812246	micropia	5433	5	4	71	'1-3	61.84	9.1	0.4	intergenic	not near genes	chr3R_4_13810001	chr3R_13810001	0.25	D20-c2
765	chr3R	13951475	13951544	micropia	9	5435	4	69	'2-2	71.38	3.9	0.8	intergenic	CG9926 -	chr3R_4_13950001	chr3R_13950001	0.50	D20-c2
766	chr3R	13975689	13975765	pogo	5	2097	13	76	'8-5	70.86	2.9	3.3	intron	rdx -	chr3R_13_13975001	chr3R_13975001	0.62	D20-c2
767	chr3R	14038140	14038157	Juan	4054	4037	5	17	'2-3	60.26	0.0	5.0	intergenic	not near genes	chr3R_5_14035001	chr3R_14035001	0.40	D20-c2
768	chr3R	14043383	14043465	flea	253	4756	9	82	'6-3	69.74	4.0	1.8	intergenic	not near genes	chr3R_9_14040001	chr3R_14040001	0.67	D20-c2
769	chr3R	14049349	14049421	transib2	9	2822	8	72	'6-2	63.32	4.4	1.5	intergenic	not near genes	chr3R_8_14045001	chr3R_14045001	0.75	D20-c2
770	chr3R	14057652	14057810	297	3	6601	5	158	'3-2	71.58	4.7	0.9	intron	foxo +	chr3R_5_14055001	chr3R_14055001	0.60	D20-c2
771	chr3R	14095872	14095900	jockey	4995	4967	5	28	'3-2	60.14	4.1	1.0	intron	CCHa1 -	chr3R_5_14095001	chr3R_14095001	0.60	D20-c2
772	chr3R	14226998	14227073	297	6585	6970	6	75	'4-2	70.39	6.0	0.9	intergenic	CG9631 -	chr3R_6_14225001	chr3R_14225001	0.67	D20-c2
773	chr3R	14228009	14228093	HMS-Beagle	6794	245	25	84	'17-8	66.07	4.6	4.5	intergenic	CG9624 -	chr3R_25_14225001	chr3R_14225001	0.68	D20-c2
774	chr3R	14365879	14365961	copia	4	259	5	82	'1-4	67.11	2.9	1.3	intron	NK7.1 -	chr3R_5_14365001	chr3R_14365001	0.20	D20-c2
775	chr3R	14478864	14478905	copia	24	238	8	41	'3-5	69.41	4.2	1.5	intron	cv-c -	chr3R_8_14475001	chr3R_14475001	0.38	D20-c2
776	chr3R	14481676	14481708	jockey	4721	4753	5	32	'2-3	65.45	14.7	0.3	5` UTR	cv-c -	chr3R_5_14480001	chr3R_14480001	0.40	D20-c2
777	chr3R	14563629	14563646	flea	4755	4772	7	17	'4-3	67.99	10.9	0.6	intergenic	not near genes	chr3R_7_14560001	chr3R_14560001	0.57	D20-c2
778	chr3R	14688241	14688323	pogo	2097	1	15	82	'3-12	58.07	1.0	7.5	intron	Meltrin -	chr3R_15_14685001	chr3R_14685001	0.20	D20-c2
779	chr3R	14710927	14711011	297	6581	394	7	84	'4-3	71.99	4.2	1.3	intron	kibra -	chr3R_7_14710001	chr3R_14710001	0.57	D20-c2
780	chr3R	14715965	14716046	micropia	2	456	9	81	'6-3	68.82	8.4	1.0	intron	kibra -	chr3R_9_14715001	chr3R_14715001	0.67	D20-c2
781	chr3R	14717830	14717907	297	4	391	5	77	'2-3	67.37	6.6	0.7	intron	kibra -	chr3R_5_14715001	chr3R_14715001	0.40	D20-c2
782	chr3R	14731166	14731190	297	370	394	9	24	'5-4	71.93	7.7	1.0	5` UTR	CG7530 -	chr3R_9_14730001	chr3R_14730001	0.56	D20-c2
783	chr3R	14806419	14806492	297	393	10	8	73	'3-5	66.55	6.1	1.1	3` UTR	btsz -	chr3R_8_14805001	chr3R_14805001	0.38	D20-c2
784	chr3R	14874699	14874728	jockey	4675	4704	12	29	'6-6	63.20	4.9	2.0	intron	btsz -	chr3R_12_14870001	chr3R_14870001	0.50	D20-c2
785	chr3R	14882069	14882106	gypsy5	423	7325	10	37	'5-5	61.40	13.0	0.7	3` UTR	CG3631 +	chr3R_10_14880001	chr3R_14880001	0.50	D20-c2
786	chr3R	15031785	15031852	Tabor	486	17	25	67	'14-11	62.51	8.0	2.8	intergenic	not near genes	chr3R_25_15030001	chr3R_15030001	0.56	D20-c2
787	chr3R	15280057	15280133	pogo	4	2096	17	76	'6-11	67.23	3.0	4.2	intergenic	not near genes	chr3R_17_15280001	chr3R_15280001	0.35	D20-c2
788	chr3R	15280139	15280242	mdg3	5266	5411	7	103	'3-4	62.41	2.5	2.0	intergenic	not near genes	chr3R_7_15280001	chr3R_15280001	0.43	D20-c2
789	chr3R	15293839	15293895	297	368	6583	5	56	'2-3	68.68	4.7	0.9	intron	Tm1 +	chr3R_5_15290001	chr3R_15290001	0.40	D20-c2
790	chr3R	15730704	15730790	Tirant	399	8107	19	86	'10-9	67.98	5.9	2.8	intergenic	not near genes	chr3R_19_15730001	chr3R_15730001	0.53	D20-c2
791	chr3R	15731654	15731704	mdg1	7071	421	8	50	'2-6	62.99	2.9	2.1	intergenic	CG34274 +	chr3R_8_15730001	chr3R_15730001	0.25	D20-c2
792	chr3R	15784774	15784862	297	390	6581	12	88	'5-7	65.01	5.4	1.9	intergenic	not near genes	chr3R_12_15780001	chr3R_15780001	0.42	D20-c2
793	chr3R	15882515	15882538	jockey	4763	4787	6	23	'3-3	61.72	3.9	1.2	intergenic	not near genes	chr3R_6_15880001	chr3R_15880001	0.50	D20-c2
794	chr3R	15943242	15943312	jockey	4987	4668	30	70	'16-14	61.22	8.9	3.0	intron	Sap47 +	chr3R_30_15940001	chr3R_15940001	0.53	D20-c2
795	chr3R	15987444	15987514	297	6585	384	8	70	'4-4	66.45	4.4	1.5	intron,intron	srp +,CR44133 +	chr3R_8_15985001	chr3R_15985001	0.50	D20-c2
796	chr3R	16181970	16182057	opus	498	7113	14	87	'11-3	74.34	3.3	3.3	intron	CG8927 +	chr3R_14_16180001	chr3R_16180001	0.79	D20-c2
797	chr3R	16226489	16226560	copia	8	252	8	71	'4-4	67.10	7.5	0.9	intron	tara +	chr3R_8_16225001	chr3R_16225001	0.50	D20-c2
798	chr3R	16255869	16255955	297	395	6580	10	86	'4-6	67.46	2.6	2.8	intron	tara +	chr3R_10_16255001	chr3R_16255001	0.40	D20-c2
799	chr3R	16358053	16358137	297	395	1	9	84	'3-6	74.09	5.3	1.4	3` UTR	CG17931 -	chr3R_9_16355001	chr3R_16355001	0.33	D20-c2
800	chr3R	16521968	16522039	rover	6950	334	9	71	'7-2	68.09	6.5	1.2	intron	CG42342 +	chr3R_9_16520001	chr3R_16520001	0.78	D20-c2
801	chr3R	16705695	16705780	Stalker2	7248	405	21	85	'8-13	63.53	4.9	3.6	intron	Ubx -	chr3R_21_16705001	chr3R_16705001	0.38	D20-c2
802	chr3R	16844647	16844708	297	6586	6957	4	61	'2-2	66.12	3.6	0.9	intron	iab-8 -	chr3R_4_16840001	chr3R_16840001	0.50	D20-c2
803	chr3R	17172743	17172824	297	6582	6973	5	81	'2-3	65.00	5.5	0.8	intron	Mur89F -	chr3R_5_17170001	chr3R_17170001	0.40	D20-c2
804	chr3R	17518054	17518112	Juan	4203	4	6	58	'2-4	57.26	10.4	0.5	intergenic	CR44349 -	chr3R_6_17515001	chr3R_17515001	0.33	D20-c2
805	chr3R	17733257	17733352	INE-1	562	559	7	95	'5-2	72.70	2.4	2.1	intergenic	Lgr1 +,CG14321 +	chr3R_7_17730001	chr3R_17730001	0.71	D20-c2
806	chr3R	17992100	17992121	McClintock	5972	5951	7	21	'2-5	65.23	4.8	1.2	intron	cpo +	chr3R_7_17990001	chr3R_17990001	0.29	D20-c2
807	chr3R	18148088	18148144	FB	20	3	6	56	'3-3	67.56	1.9	2.1	intergenic	not near genes	chr3R_6_18145001	chr3R_18145001	0.50	D20-c2
808	chr3R	18297268	18297346	micropia	5	5	12	78	'1-11	62.06	2.7	3.2	intron	l(3)05822 -	chr3R_12_18295001	chr3R_18295001	0.08	D20-c2
809	chr3R	18337539	18337594	roo	8661	9041	17	55	'12-5	68.83	5.6	2.6	intron	CG15803 -	chr3R_17_18335001	chr3R_18335001	0.71	D20-c2
810	chr3R	18388152	18388188	Doc	41	6	18	36	'6-12	66.28	7.9	2.0	exon	Vha100-4 -	chr3R_18_18385001	chr3R_18385001	0.33	D20-c2
811	chr3R	18461870	18461942	pogo	1	2089	11	72	'5-6	64.75	1.4	4.6	intron	fru -	chr3R_11_18460001	chr3R_18460001	0.45	D20-c2
812	chr3R	18502346	18502430	roo	410	8664	31	84	'14-17	68.45	5.9	4.5	intron	fru -	chr3R_31_18500001	chr3R_18500001	0.45	D20-c2
813	chr3R	18578893	18578913	297	27	7	5	20	'2-3	62.40	9.1	0.5	intron,intron	CG7694 +,fray +	chr3R_5_18575001	chr3R_18575001	0.40	D20-c2
814	chr3R	18775347	18775363	mdg3	17	33	4	16	'2-2	59.54	6.5	0.5	intron	CG7720 -	chr3R_4_18775001	chr3R_18775001	0.50	D20-c2
815	chr3R	18850986	18851044	17.6	1	7402	10	58	'7-3	74.42	8.1	1.1	3` UTR	CR45633 -	chr3R_10_18850001	chr3R_18850001	0.70	D20-c2
816	chr3R	18866459	18866534	mdg3	247	5261	9	75	'3-6	63.89	2.1	2.9	intergenic	not near genes	chr3R_9_18865001	chr3R_18865001	0.33	D20-c2
817	chr3R	18928833	18928904	3S18	342	5778	15	71	'5-10	64.47	3.2	3.6	intergenic	Mpc1 -,CG42613 +	chr3R_15_18925001	chr3R_18925001	0.33	D20-c2
818	chr3R	18930978	18931066	mdg3	5249	248	10	88	'8-2	67.04	7.3	1.2	intron	CG42613 +	chr3R_10_18930001	chr3R_18930001	0.80	D20-c2
819	chr3R	18934712	18934842	accord	7031	7031	9	130	'5-4	67.35	5.6	1.4	intron	CG42613 +	chr3R_9_18930001	chr3R_18930001	0.56	D20-c2
820	chr3R	18997095	18997182	copia	259	4868	7	87	'4-3	68.60	3.7	1.5	intron	gukh +	chr3R_7_18995001	chr3R_18995001	0.57	D20-c2
821	chr3R	19097826	19097903	diver	219	5888	13	77	'5-8	61.91	4.0	2.6	intron	CG6040 +	chr3R_13_19095001	chr3R_19095001	0.38	D20-c2
822	chr3R	19247521	19247602	3S18	340	1	14	81	'5-9	62.55	8.4	1.5	exon	CG5217 -	chr3R_14_19245001	chr3R_19245001	0.36	D20-c2
823	chr3R	19254580	19254656	micropia	454	6	9	76	'4-5	68.71	3.0	2.2	intergenic	not near genes	chr3R_9_19250001	chr3R_19250001	0.44	D20-c2
824	chr3R	19432635	19432662	F-element	10	37	6	27	'4-2	58.47	17.1	0.3	intron	CG31221 +	chr3R_6_19430001	chr3R_19430001	0.67	D20-c2
825	chr3R	19459081	19459164	rover	6952	347	5	83	'2-3	67.63	2.7	1.4	3` UTR	CG31221 +	chr3R_5_19455001	chr3R_19455001	0.40	D20-c2
826	chr3R	19625965	19625986	297	6955	395	9	21	'4-5	65.64	4.8	1.6	intron	CG6231 -	chr3R_9_19625001	chr3R_19625001	0.44	D20-c2
827	chr3R	19800346	19800393	rover	23	7284	4	47	'2-2	70.06	2.1	1.3	intron	bnl -	chr3R_4_19800001	chr3R_19800001	0.50	D20-c2
828	chr3R	19832480	19832551	micropia	4971	458	9	71	'5-4	67.62	5.9	1.3	intron	bnl -	chr3R_9_19830001	chr3R_19830001	0.56	D20-c2
829	chr3R	19942681	19942764	roo	8953	408	19	83	'6-13	66.34	3.3	4.4	intron	Hs6st -	chr3R_19_19940001	chr3R_19940001	0.32	D20-c2
830	chr3R	19965188	19965257	jockey	37	128	25	69	'24-1	64.26	8.0	2.8	intron	Hs6st -	chr3R_25_19965001	chr3R_19965001	0.96	D20-c2
831	chr3R	20441406	20441488	3S18	341	1	20	82	'6-14	62.90	4.4	3.7	intron	Gfrl -	chr3R_20_20440001	chr3R_20440001	0.30	D20-c2
832	chr3R	20764736	20764814	rover	7292	6951	13	78	'5-8	66.50	4.0	2.6	intron	Syp +	chr3R_13_20760001	chr3R_20760001	0.38	D20-c2
833	chr3R	20779325	20779347	Doc	16	3	7	22	'4-3	54.58	3.3	1.6	intron	Syp +	chr3R_7_20775001	chr3R_20775001	0.57	D20-c2
834	chr3R	20901678	20901751	Ivk	4	5374	20	73	'9-11	63.63	4.8	3.4	intergenic	CG5621 +	chr3R_20_20900001	chr3R_20900001	0.45	D20-c2
835	chr3R	21097467	21097484	297	13	2	4	17	'2-2	68.76	5.6	0.6	5` UTR	RhoGAP93B -	chr3R_4_21095001	chr3R_21095001	0.50	D20-c2
836	chr3R	21471228	21471310	copia	4869	255	22	82	'11-11	64.08	5.9	3.2	intergenic	not near genes	chr3R_22_21470001	chr3R_21470001	0.50	D20-c2
837	chr3R	21591663	21591745	copia	257	2	13	82	'5-8	66.46	3.9	2.7	intron	InR -	chr3R_13_21590001	chr3R_21590001	0.38	D20-c2
838	chr3R	21616386	21616476	Tirant	404	1	29	90	'22-7	66.08	8.8	3.0	intron	InR -	chr3R_29_21615001	chr3R_21615001	0.76	D20-c2
839	chr3R	21637692	21637761	Juan	2	4209	6	69	'5-1	62.72	3.4	1.4	intron	E2f -	chr3R_6_21635001	chr3R_21635001	0.83	D20-c2
840	chr3R	21741016	21741086	297	395	6596	7	70	'4-3	71.62	4.2	1.3	intron	CG5849 +	chr3R_7_21740001	chr3R_21740001	0.57	D20-c2
841	chr3R	21859001	21859148	297	6970	25	13	147	'7-6	64.02	2.4	3.8	intergenic	not near genes	chr3R_13_21855001	chr3R_21855001	0.54	D20-c2
842	chr3R	21988341	21988421	297	6583	392	21	80	'9-12	68.84	4.4	3.9	intron	Eip93F +	chr3R_21_21985001	chr3R_21985001	0.43	D20-c2
843	chr3R	22031172	22031257	mdg3	5252	248	18	85	'10-8	64.18	9.4	1.7	exon	CG13409 -	chr3R_18_22030001	chr3R_22030001	0.56	D20-c2
844	chr3R	22095096	22095162	roo	20	412	23	66	'9-14	68.46	6.1	3.2	intron	CG5778 -	chr3R_23_22095001	chr3R_22095001	0.39	D20-c2
845	chr3R	22288625	22288698	flea	246	4754	10	73	'3-7	65.04	6.2	1.4	intron	SKIP +	chr3R_10_22285001	chr3R_22285001	0.30	D20-c2
846	chr3R	22328347	22328408	Ivk	5368	1	12	61	'6-6	63.27	5.0	2.0	intergenic	not near genes	chr3R_12_22325001	chr3R_22325001	0.50	D20-c2
847	chr3R	22751991	22752073	297	1	393	18	82	'10-8	68.64	5.7	2.7	intron,intron	CG7029 +,Usp12-46 +	chr3R_18_22750001	chr3R_22750001	0.56	D20-c2
848	chr3R	22864504	22864553	jockey	4983	4671	16	49	'7-9	65.15	5.0	2.7	intergenic	not near genes	chr3R_16_22860001	chr3R_22860001	0.44	D20-c2
849	chr3R	23041276	23041360	mdg3	250	5255	20	84	'13-7	64.14	5.7	3.0	5` UTR	CR44226 +	chr3R_20_23040001	chr3R_23040001	0.65	D20-c2
850	chr3R	23456555	23456622	roo	15	9071	14	67	'7-7	68.87	3.0	3.5	intron	CG4374 -	chr3R_14_23455001	chr3R_23455001	0.50	D20-c2
851	chr3R	23569636	23569661	jockey	9	34	12	25	'7-5	61.57	10.9	1.0	intron	beat-IV +	chr3R_12_23565001	chr3R_23565001	0.58	D20-c2
852	chr3R	23863906	23863971	copia	249	11	14	65	'7-7	60.34	2.2	4.4	intron	Pli -	chr3R_14_23860001	chr3R_23860001	0.50	D20-c2
853	chr3R	23945436	23945520	Stalker2	7246	402	33	84	'21-12	65.32	8.1	3.6	intron	CG12268 -	chr3R_33_23945001	chr3R_23945001	0.64	D20-c2
854	chr3R	24093022	24093098	FB	2	1	25	76	'12-13	65.72	5.8	3.7	intron	4EHP -	chr3R_25_24090001	chr3R_24090001	0.48	D20-c2
855	chr3R	24197479	24197563	roo	8662	408	18	84	'7-11	68.39	2.5	5.1	3` UTR	twin -	chr3R_18_24195001	chr3R_24195001	0.39	D20-c2
856	chr3R	24261053	24261122	I-element	5	5344	18	69	'7-11	61.33	5.2	2.9	intron	jar -	chr3R_18_24260001	chr3R_24260001	0.39	D20-c2
857	chr3R	24507856	24507935	3S18	343	4	22	79	'7-15	64.17	7.4	2.6	intergenic	not near genes	chr3R_22_24505001	chr3R_24505001	0.32	D20-c2
858	chr3R	24977833	24977894	flea	5004	4755	11	61	'5-6	64.57	5.0	1.8	intergenic	not near genes	chr3R_11_24975001	chr3R_24975001	0.45	D20-c2
859	chr3R	25241291	25241372	roo	1	9071	24	81	'14-10	65.08	6.3	3.3	3` UTR	to +	chr3R_24_25240001	chr3R_25240001	0.58	D20-c2
860	chr3R	25408275	25408308	jockey	36	3	17	33	'8-9	62.81	6.7	2.2	intron	Fur1 -	chr3R_17_25405001	chr3R_25405001	0.47	D20-c2
861	chr3R	25463487	25463564	rover	3	7292	6	77	'4-2	61.62	3.8	1.2	intron	Fur1 -	chr3R_6_25460001	chr3R_25460001	0.67	D20-c2
862	chr3R	25754184	25754202	jockey	4969	35	13	18	'7-6	59.48	14.3	0.8	intron	LpR1 -	chr3R_13_25750001	chr3R_25750001	0.54	D20-c2
863	chr3R	26165500	26165533	flea	4753	4786	15	33	'5-10	67.28	9.6	1.4	intergenic	not near genes	chr3R_15_26165001	chr3R_26165001	0.33	D20-c2
864	chr3R	26495828	26495906	roo	3	9070	11	78	'5-6	64.35	2.7	3.0	intron	plum -	chr3R_11_26495001	chr3R_26495001	0.45	D20-c2
865	chr3R	26594902	26594930	297	6947	394	5	28	'2-3	72.89	5.6	0.8	intron	scrib +	chr3R_5_26590001	chr3R_26590001	0.40	D20-c2
866	chr3R	26614425	26614509	3S18	342	5765	24	84	'9-15	67.37	7.0	3.0	intergenic	not near genes	chr3R_24_26610001	chr3R_26610001	0.38	D20-c2
867	chr3R	26689802	26689825	Doc	9	34	11	23	'8-3	57.29	10.4	1.0	intergenic	not near genes	chr3R_11_26685001	chr3R_26685001	0.73	D20-c2
868	chr3R	26778889	26778909	roo	388	408	6	20	'4-2	60.09	3.1	1.5	intergenic	not near genes	chr3R_6_26775001	chr3R_26775001	0.67	D20-c2
869	chr3R	26821275	26821358	diver	224	5887	20	83	'9-11	64.04	3.8	4.2	intron	Tl +	chr3R_20_26820001	chr3R_26820001	0.45	D20-c2
870	chr3R	26890169	26890252	mdg3	5254	248	13	83	'10-3	64.07	5.2	2.1	intron	T48 +	chr3R_13_26890001	chr3R_26890001	0.77	D20-c2
871	chr3R	26982940	26983026	297	395	6580	12	86	'4-8	67.51	5.4	1.9	intron	CG14253 +	chr3R_12_26980001	chr3R_26980001	0.33	D20-c2
872	chr3R	27187964	27188049	297	6581	392	22	85	'15-7	66.11	2.4	6.5	intron	Ser -	chr3R_22_27185001	chr3R_27185001	0.68	D20-c2
873	chr3R	27569405	27569477	1360	1	3381	13	72	'7-6	66.31	7.1	1.6	intron	wdb -	chr3R_13_27565001	chr3R_27565001	0.54	D20-c2
874	chr3R	27654439	27654520	mdg3	246	5254	16	81	'9-7	63.67	4.3	3.0	intron	tau -	chr3R_16_27650001	chr3R_27650001	0.56	D20-c2
875	chr3R	27748062	27748128	copia	243	4873	9	66	'4-5	62.13	1.5	3.6	3` UTR	Ets98B +	chr3R_9_27745001	chr3R_27745001	0.44	D20-c2
876	chr3R	27756425	27756511	roo	408	8660	28	86	'15-13	66.23	4.1	5.5	intergenic	not near genes	chr3R_28_27755001	chr3R_27755001	0.54	D20-c2
877	chr3R	27894315	27894394	297	395	6587	14	79	'10-4	69.07	4.6	2.5	intron	CG34353 -	chr3R_14_27890001	chr3R_27890001	0.71	D20-c2
878	chr3R	27897323	27897351	Doc	33	5	8	28	'5-3	67.11	0.3	6.2	intron	CG34353 -	chr3R_8_27895001	chr3R_27895001	0.62	D20-c2
879	chr3R	27906957	27907030	1360	3385	4	21	73	'9-12	65.16	4.4	3.9	intergenic	not near genes	chr3R_21_27905001	chr3R_27905001	0.43	D20-c2
880	chr3R	28405241	28405295	R1A1-element	5031	5313	36	54	'24-12	62.26	10.7	3.1	intergenic	not near genes	chr3R_36_28405001	chr3R_28405001	0.67	D20-c2
881	chr3R	28411686	28411762	297	4	391	13	76	'2-11	70.21	6.4	1.8	intergenic	not near genes	chr3R_13_28410001	chr3R_28410001	0.15	D20-c2
882	chr3R	28469444	28469461	blood	7027	7010	9	17	'4-5	63.30	9.4	0.9	intron	beat-VI +	chr3R_9_28465001	chr3R_28465001	0.44	D20-c2
883	chr3R	28668931	28669007	297	391	6584	8	76	'6-2	67.44	3.2	1.9	intergenic	CG33346 +	chr3R_8_28665001	chr3R_28665001	0.75	D20-c2
884	chr3R	28674702	28674770	412	493	7068	14	68	'8-6	64.19	3.6	3.0	intergenic	CG9990 +	chr3R_14_28670001	chr3R_28670001	0.57	D20-c2
885	chr3R	28712764	28712839	Transpac	2	5222	23	75	'12-11	63.27	3.1	5.6	intron	htt +	chr3R_23_28710001	chr3R_28710001	0.52	D20-c2
886	chr3R	28734892	28734976	blood	1	379	22	84	'11-11	62.38	5.5	3.4	intergenic	htt +	chr3R_22_28730001	chr3R_28730001	0.50	D20-c2
887	chr3R	28951804	28951836	jockey	4758	4790	12	32	'5-7	61.18	4.1	2.4	intron	CG14521 -	chr3R_12_28950001	chr3R_28950001	0.42	D20-c2
888	chr3R	29370225	29370314	roo	8662	413	23	89	'13-10	65.77	7.9	2.6	intergenic	CG45546 +	chr3R_23_29370001	chr3R_29370001	0.57	D20-c2
889	chr3R	29491564	29491637	297	8	6973	7	73	'1-6	68.58	6.7	0.9	3` UTR	CG2310 -	chr3R_7_29490001	chr3R_29490001	0.14	D20-c2
890	chr3R	29512693	29512774	copia	4869	254	15	81	'9-6	62.96	5.3	2.4	intergenic	not near genes	chr3R_15_29510001	chr3R_29510001	0.60	D20-c2
891	chr3R	29592639	29592716	297	6972	4	5	77	'2-3	67.89	3.8	1.0	intron	alph +	chr3R_5_29590001	chr3R_29590001	0.40	D20-c2
892	chr3R	29960968	29961053	roo	410	8663	26	85	'9-17	64.70	5.1	4.3	intron	TkR99D -	chr3R_26_29960001	chr3R_29960001	0.35	D20-c2
893	chr3R	29999649	29999729	297	6581	6971	13	80	'10-3	67.51	5.7	1.9	3` UTR	CG11504 +	chr3R_13_29995001	chr3R_29995001	0.77	D20-c2
894	chr3R	30106774	30106804	Juan	34	4	5	30	'2-3	63.42	7.9	0.6	intron	sima +	chr3R_5_30105001	chr3R_30105001	0.40	D20-c2
895	chr3R	30204736	30204762	Doc	7	33	7	26	'4-3	67.66	4.9	1.2	intergenic	not near genes	chr3R_7_30200001	chr3R_30200001	0.57	D20-c2
896	chr3R	30211570	30211645	roo	401	8664	13	75	'8-5	69.66	3.5	2.9	intergenic	CecA1 +	chr3R_13_30210001	chr3R_30210001	0.62	D20-c2
897	chr3R	30282435	30282513	micropia	457	3	20	78	'9-11	65.59	5.8	2.9	intron	hdc +	chr3R_20_30280001	chr3R_30280001	0.45	D20-c2
898	chr3R	30513294	30513374	roo	406	8664	26	80	'12-14	64.49	6.3	3.6	exon	CG31524 -	chr3R_26_30510001	chr3R_30510001	0.46	D20-c2
899	chr3R	30802000	30802086	297	6580	395	18	86	'13-5	68.08	5.9	2.6	intron	wts -	chr3R_18_30800001	chr3R_30800001	0.72	D20-c2
900	chr3R	30901192	30901216	jockey	32	17	15	24	'8-7	57.35	6.7	1.9	exon	CG33483 -	chr3R_15_30900001	chr3R_30900001	0.53	D20-c2
901	chr3R	31101324	31101345	flea	232	5012	5	21	'2-3	59.62	1.4	2.1	intergenic	CG15553 -	chr3R_5_31100001	chr3R_31100001	0.40	D20-c2
902	chr3R	31550893	31550942	3S18	1	6073	4	49	'3-1	64.80	13.1	0.3	intron	nyo +	chr3R_4_31550001	chr3R_31550001	0.75	D20-c2
903	chr3R	31763174	31763236	mdg1	7457	13	12	62	'10-2	64.84	6.7	1.6	intergenic	CG2150 -	chr3R_12_31760001	chr3R_31760001	0.83	D20-c2
904	chr4	491934	492009	mdg3	5262	248	4	75	'3-1	65.79	0.9	2.1	intergenic	not near genes	chr4_4_490001	chr4_490001	0.75	D20-c2
905	chr4	800813	800897	opus	497	112	11	84	'9-2	66.51	2.4	3.2	3` UTR	Sox102F -	chr4_11_800001	chr4_800001	0.82	D20-c2
906	chr4	832897	832970	rover	6959	7296	7	73	'4-3	67.03	3.8	1.5	intron	Sox102F -	chr4_7_830001	chr4_830001	0.57	D20-c2
907	chrX	479341	479398	Juan	4206	4038	6	57	'3-3	57.68	3.4	1.4	5` UTR	CG32817 +	chrX_6_475001	chrX_475001	0.50	D20-c2
908	chrX	510600	510661	297	6587	377	8	61	'6-2	67.81	2.7	2.2	3` UTR,intron	elav -,arg +	chrX_8_510001	chrX_510001	0.75	D20-c2
909	chrX	1108180	1108256	copia	4870	250	10	76	'7-3	61.99	2.3	3.0	intron	CG3655 -	chrX_10_1105001	chrX_1105001	0.70	D20-c2
910	chrX	1264664	1264744	copia	4871	255	4	80	'3-1	67.80	2.3	1.2	intron	Atf3 -	chrX_4_1260001	chrX_1260001	0.75	D20-c2
911	chrX	1274545	1274570	copia	1	26	6	25	'3-3	66.67	3.4	1.4	5` UTR	Atf3 -	chrX_6_1270001	chrX_1270001	0.50	D20-c2
912	chrX	1298010	1298082	mdg3	5263	246	8	72	'5-3	61.68	3.0	2.0	intron,3` UTR	DAAM -,CG32811 -	chrX_8_1295001	chrX_1295001	0.62	D20-c2
913	chrX	1346684	1346756	Stalker2	404	12	21	72	'13-8	63.82	2.4	6.2	intron,intron	CG11418 -,Tsp2A +	chrX_21_1345001	chrX_1345001	0.62	D20-c2
914	chrX	1498057	1498133	mdg3	241	5254	10	76	'2-8	60.39	5.0	1.7	intron,intron	inc +,Nmdar2 -	chrX_10_1495001	chrX_1495001	0.20	D20-c2
915	chrX	2006365	2006446	297	6584	354	11	81	'3-8	61.01	1.7	4.1	3` UTR	Hr4 +	chrX_11_2005001	chrX_2005001	0.27	D20-c2
916	chrX	2288169	2288250	297	3	394	9	81	'3-6	67.34	4.8	1.6	intron	CG2865 -	chrX_9_2285001	chrX_2285001	0.33	D20-c2
917	chrX	2541275	2541338	copia	4883	250	6	63	'3-3	63.60	0.9	3.2	intron	trol -	chrX_6_2540001	chrX_2540001	0.50	D20-c2
918	chrX	2745150	2745207	FB	4	18	7	57	'4-3	69.17	1.5	2.8	intron	kirre +	chrX_7_2745001	chrX_2745001	0.57	D20-c2
919	chrX	2750653	2750728	mdg3	241	5255	9	75	'3-6	59.21	2.3	2.7	intron	kirre +	chrX_9_2750001	chrX_2750001	0.33	D20-c2
920	chrX	2753794	2753870	roo	405	3	10	76	'3-7	63.16	2.6	2.8	intron	kirre +	chrX_10_2750001	chrX_2750001	0.30	D20-c2
921	chrX	2892609	2892680	copia	7	251	5	71	'3-2	62.66	2.6	1.4	intron,intron	kirre +,CG3526 +	chrX_5_2890001	chrX_2890001	0.60	D20-c2
922	chrX	3006320	3006397	297	391	4	5	77	'4-1	70.00	1.3	2.2	intron	kirre +	chrX_5_3005001	chrX_3005001	0.80	D20-c2
923	chrX	3037733	3037789	rover	6	7276	6	56	'4-2	66.01	2.1	1.9	intron	kirre +	chrX_6_3035001	chrX_3035001	0.67	D20-c2
924	chrX	3130974	3131051	flea	248	4756	9	77	'5-4	66.46	2.5	2.6	exon	kirre +	chrX_9_3130001	chrX_3130001	0.56	D20-c2
925	chrX	3328229	3328297	blood	7013	7386	6	68	'4-2	64.05	2.5	1.7	intron,intron	dnc +,CR44886 -	chrX_6_3325001	chrX_3325001	0.67	D20-c2
926	chrX	3399779	3399859	micropia	4962	458	8	80	'5-3	68.32	2.2	2.5	intron,intron	CR44999 +,CG12535 -	chrX_8_3395001	chrX_3395001	0.62	D20-c2
927	chrX	3533717	3533797	rover	7296	2	11	80	'6-5	65.91	1.7	4.1	intron	CG32791 -	chrX_11_3530001	chrX_3530001	0.55	D20-c2
928	chrX	3665913	3665969	297	13	6960	4	56	'2-2	64.77	0.9	2.1	3` UTR	AstA-R1 +	chrX_4_3665001	chrX_3665001	0.50	D20-c2
929	chrX	3672136	3672218	297	6973	6581	7	82	'2-5	69.24	1.9	2.4	intron	Mnt +	chrX_7_3670001	chrX_3670001	0.29	D20-c2
930	chrX	4004908	4004932	jockey	36	12	4	24	'2-2	65.79	4.8	0.7	intergenic	not near genes	chrX_4_4000001	chrX_4000001	0.50	D20-c2
931	chrX	4187527	4187597	412	8	488	13	70	'3-10	62.75	2.4	3.8	intron	Fas2 -	chrX_13_4185001	chrX_4185001	0.23	D20-c2
932	chrX	4356347	4356408	roo	9050	8664	10	61	'5-5	67.67	2.5	2.9	intron	norpA +	chrX_10_4355001	chrX_4355001	0.50	D20-c2
933	chrX	4436791	4436809	297	395	6958	6	18	'4-2	66.05	4.0	1.2	intron,intron	CR32773 -,bi +	chrX_6_4435001	chrX_4435001	0.67	D20-c2
934	chrX	4492266	4492326	rover	4	7278	8	60	'2-6	68.05	3.8	1.7	intron	CR32773 -	chrX_8_4490001	chrX_4490001	0.25	D20-c2
935	chrX	4851029	4851057	jockey	9	37	4	28	'1-3	64.90	4.1	0.8	intron	CG42594 +	chrX_4_4850001	chrX_4850001	0.25	D20-c2
936	chrX	4914800	4914871	297	390	6590	6	71	'5-1	66.37	2.1	1.9	3` UTR	CG32772 +	chrX_6_4910001	chrX_4910001	0.83	D20-c2
937	chrX	4981599	4981672	297	395	6593	10	73	'9-1	69.08	1.9	3.4	intron	CR44833 -	chrX_10_4980001	chrX_4980001	0.90	D20-c2
938	chrX	5178987	5179017	jockey	6	36	11	30	'6-5	67.34	6.5	1.5	intron,intron	CG15465 +,rg +	chrX_11_5175001	chrX_5175001	0.55	D20-c2
939	chrX	5201986	5202008	17.6	463	7412	6	22	'2-4	60.16	3.0	1.5	intron,intron	CG15465 +,rg +	chrX_6_5200001	chrX_5200001	0.33	D20-c2
940	chrX	5341135	5341213	rover	345	6955	7	78	'5-2	63.91	1.8	2.5	intron	SK +	chrX_7_5340001	chrX_5340001	0.71	D20-c2
941	chrX	5498883	5498953	412	4	7537	8	70	'4-4	59.37	3.2	1.9	intergenic	not near genes	chrX_8_5495001	chrX_5495001	0.50	D20-c2
942	chrX	5841318	5841374	3S18	6094	15	5	56	'1-4	59.81	3.8	1.0	intergenic	CG15765 +	chrX_5_5840001	chrX_5840001	0.20	D20-c2
943	chrX	5949476	5949542	297	6581	376	10	66	'8-2	66.74	4.4	1.9	exon	CG6041 +	chrX_10_5945001	chrX_5945001	0.80	D20-c2
944	chrX	6438797	6438871	roo	10	410	11	74	'4-7	67.94	0.9	5.8	intron	CG42340 -	chrX_11_6435001	chrX_6435001	0.36	D20-c2
945	chrX	6442912	6442997	297	6585	394	6	85	'5-1	65.57	1.7	2.2	intron	CG42340 -	chrX_6_6440001	chrX_6440001	0.83	D20-c2
946	chrX	6647794	6647860	297	6972	6594	4	66	'3-1	65.18	2.0	1.3	intron	pigs +	chrX_4_6645001	chrX_6645001	0.75	D20-c2
947	chrX	6806120	6806188	diver	15	227	4	68	'2-2	63.17	6.4	0.5	exon	pod1 +	chrX_4_6805001	chrX_6805001	0.50	D20-c2
948	chrX	7114612	7114685	opus	9	496	6	73	'2-4	64.92	2.2	1.9	intergenic	not near genes	chrX_6_7110001	chrX_7110001	0.33	D20-c2
949	chrX	7120307	7120336	roo	408	9043	11	29	'7-4	63.61	3.5	2.4	intergenic	CR45532 -	chrX_11_7120001	chrX_7120001	0.64	D20-c2
950	chrX	7121794	7121823	roo	8692	8663	5	29	'3-2	66.32	1.7	1.9	intergenic	not near genes	chrX_5_7120001	chrX_7120001	0.60	D20-c2
951	chrX	7211780	7211850	mdg3	5492	5259	10	70	'4-6	62.50	1.6	3.8	intron,intron	CG9650 +,CR44357 -	chrX_10_7210001	chrX_7210001	0.40	D20-c2
952	chrX	7299108	7299180	297	6585	6967	5	72	'2-3	66.05	2.5	1.4	intron,intron	CR44357 -,CG1677 -	chrX_5_7295001	chrX_7295001	0.40	D20-c2
953	chrX	7403914	7403929	roo	407	9055	5	15	'3-2	64.47	4.7	0.9	intron,intron	CR44357 -,CG1677 -	chrX_5_7400001	chrX_7400001	0.60	D20-c2
954	chrX	7448969	7448996	jockey	4960	4688	5	27	'2-3	65.26	2.4	1.5	5` UTR	CR45533 +	chrX_5_7445001	chrX_7445001	0.40	D20-c2
955	chrX	7493178	7493250	flea	5006	4759	5	72	'2-3	65.96	2.2	1.6	5` UTR	CG43278 -	chrX_5_7490001	chrX_7490001	0.40	D20-c2
956	chrX	7681189	7681278	Tirant	8505	8103	19	89	'15-4	63.48	3.6	4.1	3` UTR	CR45665 -	chrX_19_7680001	chrX_7680001	0.79	D20-c2
957	chrX	7705485	7705547	copia	241	6	9	62	'1-8	64.77	1.8	3.2	intron	CHES-1-like -	chrX_9_7705001	chrX_7705001	0.11	D20-c2
958	chrX	8272592	8272670	micropia	456	4962	10	78	'2-8	69.44	3.0	2.5	exon	CG15343 -	chrX_10_8270001	chrX_8270001	0.20	D20-c2
959	chrX	8475900	8475977	rover	339	6950	4	77	'1-3	68.75	3.6	0.9	intron,3` UTR	CG33223 -,Cp7Fb +	chrX_4_8475001	chrX_8475001	0.25	D20-c2
960	chrX	8519029	8519046	297	395	6959	6	17	'5-1	69.45	3.4	1.4	intron	Nrg +	chrX_6_8515001	chrX_8515001	0.83	D20-c2
961	chrX	8547880	8547941	297	388	17	4	61	'2-2	64.80	4.1	0.8	exon	Nrg +	chrX_4_8545001	chrX_8545001	0.50	D20-c2
962	chrX	8829652	8829678	hopper	1383	1409	7	26	'4-3	62.58	3.7	1.5	intergenic	not near genes	chrX_7_8825001	chrX_8825001	0.57	D20-c2
963	chrX	9012253	9012333	roo	404	8662	11	80	'4-7	63.04	2.2	3.4	intron,intron	rdgA +,CR43836 -	chrX_11_9010001	chrX_9010001	0.36	D20-c2
964	chrX	9128138	9128199	FB	8	10	8	61	'5-3	60.91	2.3	2.4	intron	fend -	chrX_8_9125001	chrX_9125001	0.62	D20-c2
965	chrX	9350025	9350072	FB	19	12	6	47	'2-4	64.60	1.1	2.9	intron	CG34449 -	chrX_6_9350001	chrX_9350001	0.33	D20-c2
966	chrX	9426611	9426672	hobo	1	2937	11	61	'8-3	60.49	2.3	3.3	intron	mgl -	chrX_11_9425001	chrX_9425001	0.73	D20-c2
967	chrX	9432631	9432704	mdg3	5251	5486	4	73	'3-1	64.80	2.3	1.2	intron	mgl -	chrX_4_9430001	chrX_9430001	0.75	D20-c2
968	chrX	9741112	9741138	mdg3	5255	29	7	26	'6-1	64.84	2.8	1.8	intron	Sp1 +	chrX_7_9740001	chrX_9740001	0.86	D20-c2
969	chrX	10093053	10093086	FB	35	2	6	33	'2-4	66.45	1.9	2.1	intron	RhoU +	chrX_6_10090001	chrX_10090001	0.33	D20-c2
970	chrX	10311261	10311339	297	6581	6970	7	78	'3-4	58.86	1.9	2.4	intron	alpha-Man-I -	chrX_7_10310001	chrX_10310001	0.43	D20-c2
971	chrX	10319617	10319683	diver	211	3	10	66	'5-5	65.53	3.2	2.4	intron	alpha-Man-I -	chrX_10_10315001	chrX_10315001	0.50	D20-c2
972	chrX	10339352	10339418	roo	396	8669	8	66	'2-6	65.46	2.5	2.3	intron	CG43740 +	chrX_8_10335001	chrX_10335001	0.25	D20-c2
973	chrX	10504534	10504555	jockey	4715	4694	4	21	'2-2	58.56	1.0	2.0	intron	spri -	chrX_4_10500001	chrX_10500001	0.50	D20-c2
974	chrX	10514043	10514116	roo	407	8664	14	73	'2-12	70.93	1.7	5.2	intron	spri -	chrX_14_10510001	chrX_10510001	0.14	D20-c2
975	chrX	10518795	10518877	diver	225	1	7	82	'6-1	67.86	2.9	1.8	intron	spri -	chrX_7_10515001	chrX_10515001	0.86	D20-c2
976	chrX	10673750	10673815	roo	8664	390	11	65	'10-1	66.63	3.6	2.4	intron	X11Lbeta +	chrX_11_10670001	chrX_10670001	0.91	D20-c2
977	chrX	10675285	10675371	roo	410	8662	13	86	'8-5	66.38	3.0	3.2	intron	X11Lbeta +	chrX_13_10675001	chrX_10675001	0.62	D20-c2
978	chrX	10813424	10813493	297	6581	379	5	69	'4-1	69.73	2.4	1.5	5` UTR	Imp -	chrX_5_10810001	chrX_10810001	0.80	D20-c2
979	chrX	10817980	10818055	micropia	448	1	8	75	'2-6	62.71	1.7	3.0	intron	Imp -	chrX_8_10815001	chrX_10815001	0.25	D20-c2
980	chrX	10923967	10924034	412	480	2	11	67	'4-7	60.25	3.5	2.4	intergenic	v +	chrX_11_10920001	chrX_10920001	0.36	D20-c2
981	chrX	10981443	10981494	3S18	310	1	8	51	'6-2	70.89	1.6	3.1	intron	CG42339 -	chrX_8_10980001	chrX_10980001	0.75	D20-c2
982	chrX	11221700	11221759	pogo	11	2085	8	59	'5-3	68.69	0.7	4.7	intergenic	not near genes	chrX_8_11220001	chrX_11220001	0.62	D20-c2
983	chrX	11256879	11256949	roo	394	8662	6	70	'3-3	65.79	2.4	1.8	intron	CG44422 -	chrX_6_11255001	chrX_11255001	0.50	D20-c2
984	chrX	11449369	11449398	flea	252	223	4	29	'3-1	68.42	5.2	0.6	intron	Evi5 -	chrX_4_11445001	chrX_11445001	0.75	D20-c2
985	chrX	11519662	11519715	copia	240	14	6	53	'1-5	57.46	1.4	2.5	intron	Drak +	chrX_6_11515001	chrX_11515001	0.17	D20-c2
986	chrX	11765096	11765181	297	6581	395	7	85	'5-2	67.48	2.6	1.9	intron	m +	chrX_7_11765001	chrX_11765001	0.71	D20-c2
987	chrX	11788079	11788153	297	6591	394	5	74	'1-4	66.84	2.9	1.3	5` UTR	Karl +	chrX_5_11785001	chrX_11785001	0.20	D20-c2
988	chrX	12426365	12426399	blood	7389	343	11	34	'6-5	69.62	3.9	2.2	intergenic	not near genes	chrX_11_12425001	chrX_12425001	0.55	D20-c2
989	chrX	12576410	12576426	297	6580	15	7	16	'5-2	66.35	7.3	0.8	intron	CG11138 -	chrX_7_12575001	chrX_12575001	0.71	D20-c2
990	chrX	12967865	12967893	Doc	6	34	6	28	'3-3	66.01	1.5	2.4	intergenic	Mur11Da +	chrX_6_12965001	chrX_12965001	0.50	D20-c2
991	chrX	13151920	13151958	roo	402	8664	6	38	'4-2	46.05	3.9	1.2	intron	CG32645 +	chrX_6_13150001	chrX_13150001	0.67	D20-c2
992	chrX	13280997	13281068	roo	400	3	10	71	'2-8	67.76	3.2	2.4	intron	HDAC4 -	chrX_10_13280001	chrX_13280001	0.20	D20-c2
993	chrX	13367381	13367469	flea	4753	256	8	88	'4-4	71.55	2.3	2.4	3` UTR	Syt12 +	chrX_8_13365001	chrX_13365001	0.50	D20-c2
994	chrX	13426436	13426511	mdg3	248	5262	6	75	'2-4	60.53	2.4	1.8	intergenic	not near genes	chrX_6_13425001	chrX_13425001	0.33	D20-c2
995	chrX	13529776	13529795	Doc	9	28	5	19	'2-3	62.00	3.2	1.2	3` UTR	CG44428 -	chrX_5_13525001	chrX_13525001	0.40	D20-c2
996	chrX	13691019	13691088	297	6580	6959	5	69	'3-2	72.89	2.4	1.5	intron	CG9940 -	chrX_5_13690001	chrX_13690001	0.60	D20-c2
997	chrX	13704176	13704257	micropia	456	3	5	81	'3-2	65.53	1.6	1.9	intron,intron	CG9940 -,NnaD +	chrX_5_13700001	chrX_13700001	0.60	D20-c2
998	chrX	13784392	13784464	copia	11	256	10	72	'3-7	62.37	1.6	3.8	intron	inaE +	chrX_10_13780001	chrX_13780001	0.30	D20-c2
999	chrX	14559839	14559901	pogo	2087	10	8	62	'4-4	62.62	2.1	2.6	intergenic	not near genes	chrX_8_14555001	chrX_14555001	0.50	D20-c2
1000	chrX	14617035	14617112	297	6587	393	14	77	'3-11	65.79	2.5	4.0	intron	NetA -	chrX_14_14615001	chrX_14615001	0.21	D20-c2
1001	chrX	14692694	14692775	mdg3	5256	248	6	81	'2-4	66.23	3.2	1.4	intron	NetB -	chrX_6_14690001	chrX_14690001	0.33	D20-c2
1002	chrX	14845793	14845876	297	389	6581	4	83	'2-2	64.80	1.3	1.7	intron	Flo2 +	chrX_4_14845001	chrX_14845001	0.50	D20-c2
1003	chrX	14893081	14893162	roo	8667	410	11	81	'7-4	66.99	1.7	4.1	intron,intron	Flo2 +,CG9514 -	chrX_11_14890001	chrX_14890001	0.64	D20-c2
1004	chrX	15008005	15008068	1360	16	1	17	63	'12-5	67.13	1.4	7.1	3` UTR	eag +	chrX_17_15005001	chrX_15005001	0.71	D20-c2
1005	chrX	15199519	15199582	Burdock	6135	233	7	63	'5-2	66.54	2.4	2.1	intergenic	not near genes	chrX_7_15195001	chrX_15195001	0.71	D20-c2
1006	chrX	15284660	15284682	jockey	4701	4680	6	22	'3-3	64.64	2.0	2.0	intergenic	not near genes	chrX_6_15280001	chrX_15280001	0.50	D20-c2
1007	chrX	15618111	15618195	micropia	458	2	5	84	'1-4	66.58	2.1	1.6	intron	sog -	chrX_5_15615001	chrX_15615001	0.20	D20-c2
1008	chrX	15822007	15822032	412	29	4	4	25	'3-1	65.79	1.9	1.4	intron	sd +	chrX_4_15820001	chrX_15820001	0.75	D20-c2
1009	chrX	16100462	16100539	mdg3	241	5253	10	77	'3-7	59.68	2.1	3.2	intron,intron	CG42353 -,CG42354 -	chrX_10_16100001	chrX_16100001	0.30	D20-c2
1010	chrX	16132914	16132941	micropia	4990	7	6	27	'4-2	66.36	1.5	2.4	intron	disco-r -	chrX_6_16130001	chrX_16130001	0.67	D20-c2
1011	chrX	16248610	16248689	diver	225	4	14	79	'10-4	66.26	3.2	3.3	intergenic	not near genes	chrX_14_16245001	chrX_16245001	0.71	D20-c2
1012	chrX	16356536	16356716	297	30	6974	6	180	'1-5	74.34	1.1	2.9	intergenic	sl +,U2af50 -	chrX_6_16355001	chrX_16355001	0.17	D20-c2
1013	chrX	16408735	16408822	297	393	6585	8	87	'5-3	64.47	1.4	3.3	intron	CG4301 +	chrX_8_16405001	chrX_16405001	0.62	D20-c2
1014	chrX	16473328	16473413	roo	8662	409	9	85	'4-5	73.98	1.9	3.1	intron	para -	chrX_9_16470001	chrX_16470001	0.44	D20-c2
1015	chrX	16548612	16548696	rover	6951	347	13	84	'9-4	64.88	1.8	4.6	3` UTR	Arp2 -	chrX_13_16545001	chrX_16545001	0.69	D20-c2
1016	chrX	16830958	16831332	297	6583	6590	10	374	'9-1	64.77	1.9	3.4	intron	CG13004 -	chrX_10_16830001	chrX_16830001	0.90	D20-c2
1017	chrX	16853463	16853540	mdg3	240	5251	9	77	'3-6	65.62	2.1	2.9	intron	CG13003 -	chrX_9_16850001	chrX_16850001	0.33	D20-c2
1018	chrX	16990673	16990746	3S18	11	342	9	73	'4-5	61.55	2.8	2.4	intron	CG45002 -	chrX_9_16990001	chrX_16990001	0.44	D20-c2
1019	chrX	17063840	17063907	I-element	11	5350	8	67	'3-5	64.74	1.0	4.0	intron	CG45002 -	chrX_8_17060001	chrX_17060001	0.38	D20-c2
1020	chrX	17278155	17278236	gypsy	1	460	18	81	'14-4	66.98	4.0	3.6	intron	f +	chrX_18_17275001	chrX_17275001	0.78	D20-c2
1021	chrX	17444671	17444750	Transpac	5226	4921	14	79	'9-5	66.22	4.0	2.8	intergenic	not near genes	chrX_14_17440001	chrX_17440001	0.64	D20-c2
1022	chrX	17492834	17492880	297	6613	388	7	46	'2-5	73.23	2.4	2.1	intron	CG43658 -	chrX_7_17490001	chrX_17490001	0.29	D20-c2
1023	chrX	17529657	17529737	297	6581	6972	4	80	'3-1	72.95	1.7	1.5	intron	CG43658 -	chrX_4_17525001	chrX_17525001	0.75	D20-c2
1024	chrX	17717877	17717953	diver	4	222	11	76	'6-5	64.83	2.3	3.3	intron	CG42684 +	chrX_11_17715001	chrX_17715001	0.55	D20-c2
1025	chrX	17791874	17791944	412	7540	7	9	70	'6-3	62.87	2.6	2.5	intron	OdsH +	chrX_9_17790001	chrX_17790001	0.67	D20-c2
1026	chrX	17830263	17830340	gypsy	6986	454	15	77	'11-4	66.73	5.0	2.5	intron	CR44691 -	chrX_15_17830001	chrX_17830001	0.73	D20-c2
1027	chrX	17837965	17838042	S-element	3	1710	4	77	'2-2	62.83	1.1	1.9	intron	CG6398 +	chrX_4_17835001	chrX_17835001	0.50	D20-c2
1028	chrX	17878545	17878616	297	10	391	7	71	'4-3	63.62	2.9	1.8	intron	mnb -	chrX_7_17875001	chrX_17875001	0.57	D20-c2
1029	chrX	17963670	17963698	hopper	1413	1385	5	28	'3-2	65.26	7.1	0.6	intron	Sh -	chrX_5_17960001	chrX_17960001	0.60	D20-c2
1030	chrX	18099744	18099825	mdg3	5250	242	5	81	'3-2	65.00	1.9	1.7	intron	CG7192 -	chrX_5_18095001	chrX_18095001	0.60	D20-c2
1031	chrX	18145138	18145213	roo	8669	406	14	75	'7-7	66.55	1.4	5.8	intergenic	not near genes	chrX_14_18145001	chrX_18145001	0.50	D20-c2
1032	chrX	18193733	18193748	hopper	1400	1385	4	15	'2-2	67.11	3.9	0.8	intron	Frq2 +	chrX_4_18190001	chrX_18190001	0.50	D20-c2
1033	chrX	18240348	18240414	297	14	390	5	66	'1-4	61.84	1.0	2.5	intergenic	upd2 -	chrX_5_18240001	chrX_18240001	0.20	D20-c2
1034	chrX	18294908	18294976	17.6	7418	6942	7	68	'5-2	65.90	2.1	2.3	intergenic	not near genes	chrX_7_18290001	chrX_18290001	0.71	D20-c2
1035	chrX	18319954	18319983	jockey	7	36	9	29	'3-6	60.66	5.5	1.4	intron	CG6023 -	chrX_9_18315001	chrX_18315001	0.33	D20-c2
1036	chrX	18471144	18471213	Juan	4205	4072	9	69	'2-7	58.63	0.8	5.0	intron	CG32547 -	chrX_9_18470001	chrX_18470001	0.22	D20-c2
1037	chrX	18565258	18565288	jockey	4706	4676	6	30	'4-2	63.16	2.3	1.8	intron	Bx +	chrX_6_18565001	chrX_18565001	0.67	D20-c2
1038	chrX	18623267	18623344	412	7	494	14	77	'5-9	61.67	3.8	2.9	intergenic	not near genes	chrX_14_18620001	chrX_18620001	0.36	D20-c2
1039	chrX	18642217	18642254	Stalker2	7282	7245	11	37	'6-5	66.51	1.2	5.0	intron	Rip11 -	chrX_11_18640001	chrX_18640001	0.55	D20-c2
1040	chrX	18705623	18705697	opus	112	7483	8	74	'2-6	71.92	2.9	2.1	intergenic	not near genes	chrX_8_18705001	chrX_18705001	0.25	D20-c2
1041	chrX	18789876	18789927	copia	4892	247	4	51	'1-3	63.81	0.8	2.2	intron	Pk17E +	chrX_4_18785001	chrX_18785001	0.25	D20-c2
1042	chrX	18834707	18834779	297	5	387	4	72	'2-2	69.08	2.5	1.1	intron	Pvf1 +	chrX_4_18830001	chrX_18830001	0.50	D20-c2
1043	chrX	18835718	18835789	297	394	6594	8	71	'6-2	70.72	1.9	2.8	intron	Pvf1 +	chrX_8_18835001	chrX_18835001	0.75	D20-c2
1044	chrX	18868662	18868737	297	6586	390	5	75	'1-4	65.44	3.7	1.1	intron	CG34401 +	chrX_5_18865001	chrX_18865001	0.20	D20-c2
1045	chrX	18909739	18909800	rover	6955	328	6	61	'5-1	64.47	2.1	1.9	3` UTR	CG7378 +	chrX_6_18905001	chrX_18905001	0.83	D20-c2
1046	chrX	18986181	18986262	roo	411	8668	18	81	'9-9	62.99	1.9	6.2	intron	CG43759 +	chrX_18_18985001	chrX_18985001	0.50	D20-c2
1047	chrX	19119818	19119896	opus	475	7113	7	78	'3-4	60.29	0.1	6.4	intergenic	not near genes	chrX_7_19115001	chrX_19115001	0.43	D20-c2
1048	chrX	19177511	19177591	copia	4869	253	8	80	'4-4	61.68	3.6	1.7	exon	CG7556 -	chrX_8_19175001	chrX_19175001	0.50	D20-c2
1049	chrX	19226188	19226252	diver	13	219	11	64	'4-7	62.94	2.9	2.8	intron	CG7884 +	chrX_11_19225001	chrX_19225001	0.36	D20-c2
1050	chrX	19281717	19281786	297	6957	6580	6	69	'1-5	65.79	3.7	1.3	3` UTR	CG8034 -	chrX_6_19280001	chrX_19280001	0.17	D20-c2
1051	chrX	19310271	19310363	jockey	4666	33	14	92	'4-10	63.06	0.8	7.8	intergenic	out -	chrX_14_19310001	chrX_19310001	0.29	D20-c2
1052	chrX	19313203	19313279	297	394	382	12	76	'8-4	63.60	4.1	2.4	exon	out -	chrX_12_19310001	chrX_19310001	0.67	D20-c2
1053	chrX	19386323	19386385	rover	15	342	5	62	'2-3	66.01	2.3	1.5	intron	kek5 +	chrX_5_19385001	chrX_19385001	0.40	D20-c2
1054	chrX	19582250	19582321	297	6583	383	7	71	'5-2	70.68	2.1	2.3	intergenic	CG14218 -	chrX_7_19580001	chrX_19580001	0.71	D20-c2
1055	chrX	19661938	19662013	mdg3	245	5259	6	75	'2-4	61.37	3.2	1.4	intron	CG14223 -	chrX_6_19660001	chrX_19660001	0.33	D20-c2
1056	chrX	19745682	19745714	Max-element	317	8520	7	32	'3-4	68.19	8.7	0.7	3` UTR,3` UTR	CG33932 +,Rpp20 +	chrX_7_19745001	chrX_19745001	0.43	D20-c2
1057	chrX	19907443	19907460	297	11	28	4	17	'2-2	66.44	0.8	2.2	3` UTR	Hers +	chrX_4_19905001	chrX_19905001	0.50	D20-c2
1058	chrX	20059325	20059349	blood	7009	7033	6	24	'4-2	63.38	2.2	1.9	intron	Dop2R -	chrX_6_20055001	chrX_20055001	0.67	D20-c2
1059	chrX	20267799	20267875	S-element	1708	1714	6	76	'3-3	66.89	1.8	2.1	intergenic	Inx6 -	chrX_6_20265001	chrX_20265001	0.50	D20-c2
1060	chrX	20326490	20326543	roo	13	9054	6	53	'2-4	61.62	2.0	2.0	intron	CG1504 -	chrX_6_20325001	chrX_20325001	0.33	D20-c2
1061	chrX	20366385	20366464	HMS-Beagle	246	6801	17	79	'8-9	66.25	2.5	4.9	intergenic	not near genes	chrX_17_20365001	chrX_20365001	0.47	D20-c2
1062	chrX	20870076	20870155	copia	257	5	7	79	'4-3	66.29	1.9	2.4	intron	shakB -	chrX_7_20870001	chrX_20870001	0.57	D20-c2
1063	chrX	20975476	20975531	Max-element	8509	1	13	55	'8-5	68.84	2.5	3.7	intergenic	not near genes	chrX_13_20975001	chrX_20975001	0.62	D20-c2
1064	chrX	21060045	21060073	roo	8667	31	6	28	'2-4	67.49	1.8	2.1	intron	bves +	chrX_6_21060001	chrX_21060001	0.33	D20-c2
1065	chrX	21087579	21087614	mdg3	5251	34	6	35	'4-2	64.37	0.8	3.3	intergenic	not near genes	chrX_6_21085001	chrX_21085001	0.67	D20-c2
1066	chrX	21412586	21412655	mdg3	250	18	5	69	'4-1	64.21	1.6	1.9	intergenic	not near genes	chrX_5_21410001	chrX_21410001	0.80	D20-c2
1067	chrX	21499246	21499329	297	6582	394	9	83	'4-5	71.89	3.3	2.1	intron	CR45082 -	chrX_9_21495001	chrX_21495001	0.44	D20-c2
1068	chrX	21667905	21667925	gypsy2	31	11	8	20	'3-5	62.94	31.7	0.2	intergenic	not near genes	chrX_8_21665001	chrX_21665001	0.38	D20-c2
1069	chrX	21668882	21668897	mdg1	7446	393	4	15	'2-2	61.19	4.7	0.7	intergenic	not near genes	chrX_4_21665001	chrX_21665001	0.50	D20-c2
1070	chrX	21772482	21772498	gypsy3	7	6566	7	16	'3-4	58.39	10.8	0.6	intergenic	not near genes	chrX_7_21770001	chrX_21770001	0.43	D20-c2
1071	chrX	21933826	21933844	gypsy11	392	4351	12	18	'5-7	55.45	35.5	0.3	intergenic	not near genes	chrX_12_21930001	chrX_21930001	0.42	D20-c2
1072	chrX	22517615	22517681	1360	28	3	6	66	'3-3	64.91	0.7	3.5	intron	CG17600 +	chrX_6_22515001	chrX_22515001	0.50	D20-c2
1073	chrX	22778491	22778558	Transpac	4936	310	8	67	'5-3	68.91	2.8	2.1	intron	CR44997 +	chrX_8_22775001	chrX_22775001	0.62	D20-c2
1074	chrX	22846909	22846978	Tirant	5	8494	16	69	'8-8	64.12	4.9	2.7	intron,intron	fog -,CG42346 +	chrX_16_22845001	chrX_22845001	0.50	D20-c2
1075	chrX	22920931	22920989	roo	8663	9046	9	58	'5-4	69.01	2.6	2.5	intergenic	not near genes	chrX_9_22920001	chrX_22920001	0.56	D20-c2
1076	chrX	23011758	23011835	297	6973	6585	7	77	'4-3	67.42	0.4	5.0	intergenic	Rab21 -,FucTC -,CR45010 +	chrX_7_23010001	chrX_23010001	0.57	D20-c2
1077	chrX	23065008	23065079	Burdock	7	249	12	71	'4-8	69.19	2.4	3.5	intergenic	not near genes	chrX_12_23065001	chrX_23065001	0.33	D20-c2
1078	chrY	424999	425020	McClintock	6419	6398	5	21	'2-3	66.84	0.0	5.0	intergenic	not near genes	chrY_5_420001	chrY_420001	0.40	D20-c2
1079	chrY	1733424	1733485	412	19	7545	5	61	'3-2	62.74	0.0	5.0	intron	Ppr-Y +	chrY_5_1730001	chrY_1730001	0.60	D20-c2