SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 47440 47481 chr2L 52570 52611 jockey 46 5130 18.5 18.0 18.2 2.4 5171 chr2L 47440 intron Cda5 - chr2L 50026 intron Cda5 - chr2L 52611 intron Cda5 - chr2L_46_50001 chr2L_50001 D17-c3 2 chr2L 53343 53377 chr2L 53525 53559 6 182 30.5 35.5 33.0 0.2 216 chr2L 53343 intron Cda5 - chr2L 53451 intron Cda5 - chr2L 53559 intron Cda5 - chr2L_6_50001 chr2L_50001 D17-c3 3 chr2L 73762 73809 chr2L 73896 73943 31 134 30.5 11.0 20.8 1.4 181 chr2L 73762 3` UTR,intron CR44987 -,galectin + chr2L 73852 intron galectin + chr2L 73943 intron galectin + chr2L_31_70001 chr2L_70001 D17-c3 4 chr2L 129446 129459 chr2L 133976 133984 4 4526 49.5 36.0 42.8 0.1 4538 chr2L 129446 intron,intron CG11455 +,CG3164 - chr2L 131715 intron CG11455 + chr2L 133984 intron,3` UTR CG11455 +,Gs1 + chr2L_4_130001 chr2L_130001 D17-c3 5 chr2L 134117 134166 chr2L 134226 134275 4 109 23.0 18.0 20.5 0.2 158 chr2L 134117 intron,3` UTR CG11455 +,Gs1 + chr2L 134196 intron,3` UTR CG11455 +,Gs1 + chr2L 134275 intron,3` UTR CG11455 +,Gs1 + chr2L_4_130001 chr2L_130001 D17-c3 6 chr2L 179434 179485 chr2L 179542 179593 7 108 41.0 41.0 41.0 0.2 159 chr2L 179434 intron spen + chr2L 179514 intron spen + chr2L 179593 intron spen + chr2L_7_175001 chr2L_175001 D17-c3 7 chr2L 263276 263329 chr2L 263446 263500 6 171 29.0 38.5 33.8 0.2 224 chr2L 263276 intron,3` UTR CG3645 -,CG17075 - chr2L 263388 intron,3` UTR CG3645 -,CG17075 - chr2L 263500 intron,3` UTR CG3645 -,CG17075 - chr2L_6_260001 chr2L_260001 D17-c3 8 chr2L 300777 300831 chr2L 300879 300933 7 102 46.0 45.5 45.8 0.1 156 chr2L 300777 intron Pi3K21B + chr2L 300855 intron Pi3K21B + chr2L 300933 intron Pi3K21B + chr2L_7_300001 chr2L_300001 D17-c3 9 chr2L 307203 307261 chr2L 307379 307437 10 174 51.5 33.0 42.2 0.2 234 chr2L 307203 intron Plc21C + chr2L 307320 intron Plc21C + chr2L 307437 intron Plc21C + chr2L_10_305001 chr2L_305001 D17-c3 10 chr2L 325112 325143 chr2L 325212 325245 21 100 20.5 19.5 20.0 1.0 133 chr2L 325112 intron Plc21C + chr2L 325178 intron Plc21C + chr2L 325245 intron Plc21C + chr2L_21_325001 chr2L_325001 D17-c3 11 chr2L 347867 347875 chr2L 355392 355400 blood 5 7525 16.0 9.0 12.5 0.4 7533 chr2L 347867 3` UTR Plc21C + chr2L 351634 intron Plc21C + chr2L 355400 3` UTR Plc21C + chr2L_5_350001 chr2L_350001 D17-c3 12 chr2L 347876 347918 chr2L 355390 355443 blood 16 7524 6.5 9.0 7.8 1.8 7567 chr2L 347876 3` UTR Plc21C + chr2L 351660 intron Plc21C + chr2L 355443 3` UTR Plc21C + chr2L_16_350001 chr2L_350001 D17-c3 13 chr2L 371417 371458 chr2L 371521 371562 23 104 12.5 10.0 11.2 1.9 145 chr2L 371417 intergenic not near genes chr2L 371490 intergenic not near genes chr2L 371562 intergenic not near genes chr2L_23_370001 chr2L_370001 D17-c3 14 chr2L 395722 395778 chr2L 395829 395885 35 107 19.0 24.0 21.5 1.6 163 chr2L 395722 intergenic CR43718 + chr2L 395804 intergenic CR43718 + chr2L 395885 intergenic CR43718 + chr2L_35_395001 chr2L_395001 D17-c3 15 chr2L 407925 407973 chr2L 408031 408079 5 106 36.0 33.0 34.5 0.1 154 chr2L 407925 3` UTR RpI135 + chr2L 408002 intergenic AP-2alpha -,RpI135 + chr2L 408079 3` UTR AP-2alpha - chr2L_5_405001 chr2L_405001 D17-c3 16 chr2L 467338 467360 chr2L 467462 467485 16 124 26.5 21.0 23.8 0.6 147 chr2L 467338 intron CG4297 - chr2L 467412 intron CG4297 - chr2L 467485 intron CG4297 - chr2L_16_465001 chr2L_465001 D17-c3 17 chr2L 510196 510246 chr2L 510308 510356 4 112 29.5 34.0 31.8 0.1 160 chr2L 510196 intron ush + chr2L 510276 intron ush + chr2L 510356 intron ush + chr2L_4_510001 chr2L_510001 D17-c3 18 chr2L 586795 586819 chr2L 656730 656779 5 69955 58.0 62.5 60.2 0.1 69984 chr2L 586795 intron Gsc - chr2L 621787 intergenic not near genes chr2L 656779 exon ds - chr2L_5_620001 chr2L_620001 D17-c3 19 chr2L 590601 590650 chr2L 590727 590776 21 125 20.5 27.0 23.8 0.8 175 chr2L 590601 intron Gsc - chr2L 590688 intron Gsc - chr2L 590776 intron Gsc - chr2L_21_590001 chr2L_590001 D17-c3 20 chr2L 602248 602273 chr2L 602386 602411 7 137 4.5 7.0 5.8 1.0 163 chr2L 602248 intergenic not near genes chr2L 602330 intergenic CG13689 + chr2L 602411 intergenic CG13689 + chr2L_7_600001 chr2L_600001 D17-c3 21 chr2L 630559 630593 chr2L 630662 630665 8 109 28.0 30.5 29.2 0.3 106 chr2L 630559 intergenic not near genes chr2L 630612 intergenic not near genes chr2L 630665 intergenic not near genes chr2L_8_630001 chr2L_630001 D17-c3 22 chr2L 637450 637470 chr2L 637557 637577 15 107 21.5 27.5 24.5 0.6 127 chr2L 637450 intergenic not near genes chr2L 637514 intergenic not near genes chr2L 637577 intergenic not near genes chr2L_15_635001 chr2L_635001 D17-c3 23 chr2L 668419 668463 chr2L 668524 668568 7 105 43.0 44.0 43.5 0.2 149 chr2L 668419 intron ds - chr2L 668494 intron ds - chr2L 668568 intron ds - chr2L_7_665001 chr2L_665001 D17-c3 24 chr2L 686912 686921 chr2L 695977 695986 roo 7 9064 19.0 9.5 14.2 0.5 9074 chr2L 686912 intron ds - chr2L 691449 intron ds - chr2L 695986 intron ds - chr2L_7_690001 chr2L_690001 D17-c3 25 chr2L 686924 686946 chr2L 695968 696011 roo 15 9063 10.0 7.5 8.8 1.5 9087 chr2L 686924 intron ds - chr2L 691468 intron ds - chr2L 696011 intron ds - chr2L_15_690001 chr2L_690001 D17-c3 26 chr2L 736864 736901 chr2L 736993 737031 4 130 47.5 41.0 44.2 0.1 167 chr2L 736864 intergenic Eaat2 - chr2L 736948 intergenic Eaat2 - chr2L 737031 intergenic Eaat2 - chr2L_4_735001 chr2L_735001 D17-c3 27 chr2L 763570 763628 chr2L 763671 763726 47 99 27.5 27.0 27.2 1.7 156 chr2L 763570 intergenic not near genes chr2L 763648 intergenic not near genes chr2L 763726 intergenic not near genes chr2L_47_760001 chr2L_760001 D17-c3 28 chr2L 769630 769638 chr2L 769890 769898 6 260 39.0 16.0 27.5 0.2 268 chr2L 769630 intergenic not near genes chr2L 769764 intergenic not near genes chr2L 769898 intergenic not near genes chr2L_6_765001 chr2L_765001 D17-c3 29 chr2L 769641 769685 chr2L 769888 769945 22 258 24.0 16.5 20.2 1.0 304 chr2L 769641 intergenic not near genes chr2L 769793 intergenic not near genes chr2L 769945 intergenic not near genes chr2L_22_765001 chr2L_765001 D17-c3 30 chr2L 770443 770456 chr2L 772249 772262 Bari1 9 1805 26.5 19.0 22.8 0.4 1819 chr2L 770443 intergenic not near genes chr2L 771352 intergenic not near genes chr2L 772262 intergenic CR44614 + chr2L_9_770001 chr2L_770001 D17-c3 31 chr2L 770457 770491 chr2L 772248 772297 Bari1 30 1803 12.0 19.0 15.5 1.8 1840 chr2L 770457 intergenic not near genes chr2L 771377 intergenic not near genes chr2L 772297 intergenic CR44614 + chr2L_30_770001 chr2L_770001 D17-c3 32 chr2L 773581 773586 chr2L 776500 776505 6 2919 62.0 18.0 40.0 0.1 2924 chr2L 773581 5` UTR CG12506 + chr2L 775043 intergenic not near genes chr2L 776505 intergenic CG13946 + chr2L_6_775001 chr2L_775001 D17-c3 33 chr2L 844917 844966 chr2L 845029 845037 15 109 44.5 37.5 41.0 0.4 120 chr2L 844917 intron drongo - chr2L 844977 intron drongo - chr2L 845037 intron drongo - chr2L_15_840001 chr2L_840001 D17-c3 34 chr2L 849448 849477 chr2L 849564 849572 12 113 34.0 34.5 34.2 0.3 124 chr2L 849448 intron drongo - chr2L 849510 intron drongo - chr2L 849572 intron drongo - chr2L_12_845001 chr2L_845001 D17-c3 35 chr2L 877819 877824 chr2L 877925 877930 4 106 28.5 7.5 18.0 0.2 111 chr2L 877819 3` UTR,exon CG15824 -,ninaA + chr2L 877874 3` UTR,intron CG15824 -,ninaA + chr2L 877930 3` UTR,intron CG15824 -,ninaA + chr2L_4_875001 chr2L_875001 D17-c3 36 chr2L 877825 877875 chr2L 877923 877981 27 105 6.5 7.0 6.8 3.5 156 chr2L 877825 3` UTR,exon CG15824 -,ninaA + chr2L 877903 3` UTR,intron CG15824 -,ninaA + chr2L 877981 3` UTR,exon CG15824 -,ninaA + chr2L_27_875001 chr2L_875001 D17-c3 37 chr2L 958942 958981 chr2L 959087 959103 15 143 35.5 15.0 25.2 0.6 161 chr2L 958942 intergenic not near genes chr2L 959022 intergenic not near genes chr2L 959103 intergenic not near genes chr2L_15_955001 chr2L_955001 D17-c3 38 chr2L 964553 964570 chr2L 964662 964678 7 109 33.5 36.0 34.8 0.2 125 chr2L 964553 intergenic not near genes chr2L 964616 intergenic not near genes chr2L 964678 intergenic not near genes chr2L_7_960001 chr2L_960001 D17-c3 39 chr2L 976852 976885 chr2L 984513 984544 roo 8 7661 38.5 19.5 29.0 0.3 7692 chr2L 976852 intergenic not near genes chr2L 980698 intergenic not near genes chr2L 984544 intergenic not near genes chr2L_8_980001 chr2L_980001 D17-c3 40 chr2L 1057475 1057522 chr2L 1057582 1057624 5 99 57.0 60.5 58.8 0.1 149 chr2L 1057475 intron S - chr2L 1057550 intron S - chr2L 1057624 intron S - chr2L_5_1055001 chr2L_1055001 D17-c3 41 chr2L 1066073 1066123 chr2L 1066179 1066229 14 106 42.0 41.0 41.5 0.3 156 chr2L 1066073 intron S - chr2L 1066151 intron S - chr2L 1066229 intron S - chr2L_14_1065001 chr2L_1065001 D17-c3 42 chr2L 1156833 1156890 chr2L 1156963 1157020 11 129 30.5 28.0 29.2 0.4 187 chr2L 1156833 intron capt - chr2L 1156926 intron capt - chr2L 1157020 intron capt - chr2L_11_1155001 chr2L_1155001 D17-c3 43 chr2L 1172003 1172044 chr2L 4610613 4610652 13 3438609 37.5 34.0 35.8 0.4 3438649 chr2L 1172003 intron CG5118 - chr2L 2891328 intron lilli + chr2L 4610652 intron dp - chr2L_13_2890001 chr2L_2890001 D17-c3 44 chr2L 1220108 1220156 chr2L 1227599 1227647 blood 14 7491 25.5 11.0 18.2 0.7 7539 chr2L 1220108 intron CG42329 + chr2L 1223878 intron CG42329 + chr2L 1227647 intron CG42329 + chr2L_14_1220001 chr2L_1220001 D17-c3 45 chr2L 1301733 1301775 chr2L 1302297 1302339 gypsy 16 564 6.0 7.5 6.8 2.1 606 chr2L 1301733 intergenic not near genes chr2L 1302036 intergenic not near genes chr2L 1302339 intergenic not near genes chr2L_16_1300001 chr2L_1300001 D17-c3 46 chr2L 1322005 1322023 chr2L 1322119 1322137 5 114 28.0 39.5 33.8 0.1 132 chr2L 1322005 intergenic not near genes chr2L 1322071 intergenic not near genes chr2L 1322137 intergenic not near genes chr2L_5_1320001 chr2L_1320001 D17-c3 47 chr2L 1322025 1322048 chr2L 1322116 1322124 7 96 26.0 38.5 32.2 0.2 99 chr2L 1322025 intergenic not near genes chr2L 1322074 intergenic not near genes chr2L 1322124 intergenic not near genes chr2L_7_1320001 chr2L_1320001 D17-c3 48 chr2L 1370232 1370276 chr2L 1370422 1370446 12 184 48.5 59.0 53.8 0.2 214 chr2L 1370232 intergenic not near genes chr2L 1370339 intergenic not near genes chr2L 1370446 intergenic not near genes chr2L_12_1370001 chr2L_1370001 D17-c3 49 chr2L 1381860 1381875 chr2L 1403397 1403412 6 21537 101.0 54.0 77.5 0.1 21552 chr2L 1381860 exon,5` UTR lea -,CR44897 + chr2L 1392636 intron lea - chr2L 1403412 intron lea - chr2L_6_1390001 chr2L_1390001 D17-c3 50 chr2L 1438798 1438855 chr2L 1438903 1438960 35 105 7.5 6.0 6.8 4.5 162 chr2L 1438798 intergenic not near genes chr2L 1438879 intergenic not near genes chr2L 1438960 intergenic not near genes chr2L_35_1435001 chr2L_1435001 D17-c3 51 chr2L 1443342 1443360 chr2L 1443447 1443465 8 104 1.5 20.0 10.8 0.7 123 chr2L 1443342 3` UTR CG43402 + chr2L 1443404 3` UTR CG43402 + chr2L 1443465 3` UTR CG43402 + chr2L_8_1440001 chr2L_1440001 D17-c3 52 chr2L 1450674 1450728 chr2L 1450782 1450838 34 110 13.5 10.0 11.8 2.7 164 chr2L 1450674 intergenic not near genes chr2L 1450756 intergenic not near genes chr2L 1450838 intergenic not near genes chr2L_34_1450001 chr2L_1450001 D17-c3 53 chr2L 1458220 1458262 chr2L 1458322 1458364 38 101 12.0 20.0 16.0 2.2 144 chr2L 1458220 intergenic not near genes chr2L 1458292 intergenic not near genes chr2L 1458364 intergenic not near genes chr2L_38_1455001 chr2L_1455001 D17-c3 54 chr2L 1529038 1529089 chr2L 1529154 1529205 6 116 6.5 2.0 4.2 1.2 167 chr2L 1529038 intergenic not near genes chr2L 1529122 intergenic not near genes chr2L 1529205 intergenic not near genes chr2L_6_1525001 chr2L_1525001 D17-c3 55 chr2L 1534032 1534087 chr2L 1534387 1534442 31 355 4.0 7.5 5.8 4.6 410 chr2L 1534032 intergenic not near genes chr2L 1534237 intergenic not near genes chr2L 1534442 intergenic not near genes chr2L_31_1530001 chr2L_1530001 D17-c3 56 chr2L 1536468 1536526 chr2L 1536625 1536683 18 153 0.0 8.5 4.2 3.5 215 chr2L 1536468 intergenic not near genes chr2L 1536576 intergenic not near genes chr2L 1536683 intergenic not near genes chr2L_18_1535001 chr2L_1535001 D17-c3 57 chr2L 1570670 1570717 chr2L 1573567 1573614 F-element 17 2897 7.0 10.0 8.5 1.8 2944 chr2L 1570670 intron haf + chr2L 1572142 intron haf + chr2L 1573614 intron haf + chr2L_17_1570001 chr2L_1570001 D17-c3 58 chr2L 1581895 1581942 chr2L 1582025 1582072 29 129 10.0 7.5 8.8 3.0 177 chr2L 1581895 intron haf + chr2L 1581984 intron haf + chr2L 1582072 intron haf + chr2L_29_1580001 chr2L_1580001 D17-c3 59 chr2L 1590929 1590985 chr2L 1591030 1591086 25 101 8.5 9.5 9.0 2.5 157 chr2L 1590929 intron haf + chr2L 1591008 intron haf + chr2L 1591086 intron haf + chr2L_25_1590001 chr2L_1590001 D17-c3 60 chr2L 1628844 1628856 chr2L 1628950 1628958 7 109 2.0 8.0 5.0 1.2 114 chr2L 1628844 intergenic not near genes chr2L 1628901 intergenic not near genes chr2L 1628958 intergenic not near genes chr2L_7_1625001 chr2L_1625001 D17-c3 61 chr2L 1634742 1634764 chr2L 1634852 1634868 8 109 13.0 14.5 13.8 0.5 126 chr2L 1634742 intergenic not near genes chr2L 1634805 intergenic not near genes chr2L 1634868 intergenic not near genes chr2L_8_1630001 chr2L_1630001 D17-c3 62 chr2L 1638137 1638182 chr2L 1638247 1638260 12 104 8.5 5.0 6.8 1.5 123 chr2L 1638137 intergenic not near genes chr2L 1638198 intergenic not near genes chr2L 1638260 intergenic not near genes chr2L_12_1635001 chr2L_1635001 D17-c3 63 chr2L 1662002 1662035 chr2L 1662112 1662153 10 112 4.5 2.0 3.2 2.4 151 chr2L 1662002 intron chinmo + chr2L 1662078 intron chinmo + chr2L 1662153 intron chinmo + chr2L_10_1660001 chr2L_1660001 D17-c3 64 chr2L 1678933 1679006 chr2L 1686441 1686496 blood 9 7502 0.5 7.5 4.0 1.8 7563 chr2L 1678933 intron chinmo + chr2L 1682714 intron chinmo + chr2L 1686496 intron chinmo + chr2L_9_1680001 chr2L_1680001 D17-c3 65 chr2L 1711335 1711389 chr2L 1711684 1711708 mdg3 31 348 14.0 15.0 14.5 2.0 373 chr2L 1711335 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711522 3` UTR frtz - chr2L 1711708 3` UTR frtz - chr2L_31_1710001 chr2L_1710001 D17-c3 66 chr2L 1721823 1721853 chr2L 1721932 1721962 9 109 0.0 5.5 2.8 2.4 139 chr2L 1721823 intron Rim2 - chr2L 1721892 intron Rim2 - chr2L 1721962 intron Rim2 - chr2L_9_1720001 chr2L_1720001 D17-c3 67 chr2L 1753164 1753219 chr2L 1753275 1753331 7 111 0.0 6.0 3.0 1.8 167 chr2L 1753164 intergenic CG17648 + chr2L 1753248 intergenic CG17648 + chr2L 1753331 intergenic CG17648 + chr2L_7_1750001 chr2L_1750001 D17-c3 68 chr2L 1831790 1831803 chr2L 1832862 1832875 4 1072 30.0 29.0 29.5 0.1 1085 chr2L 1831790 3` UTR,3` UTR c-cup -,mir-2280 - chr2L 1832332 exon c-cup - chr2L 1832875 intergenic c-cup - chr2L_4_1830001 chr2L_1830001 D17-c3 69 chr2L 1878214 1878272 chr2L 1878363 1878421 21 149 6.5 4.0 5.2 3.4 207 chr2L 1878214 intron CG31663 - chr2L 1878318 intron CG31663 - chr2L 1878421 intron CG31663 - chr2L_21_1875001 chr2L_1875001 D17-c3 70 chr2L 1883393 1883445 chr2L 1884000 1884050 12 603 2.5 4.0 3.2 2.9 657 chr2L 1883393 intron CG15358 - chr2L 1883722 intron CG15358 - chr2L 1884050 exon CG15358 - chr2L_12_1880001 chr2L_1880001 D17-c3 71 chr2L 1910514 1910569 chr2L 1910628 1910683 18 114 0.0 3.0 1.5 7.2 169 chr2L 1910514 intron CG7337 + chr2L 1910598 intron CG7337 + chr2L 1910683 intron CG7337 + chr2L_18_1910001 chr2L_1910001 D17-c3 72 chr2L 1957926 1957954 chr2L 1958032 1958060 5 106 9.5 9.5 9.5 0.5 134 chr2L 1957926 intron erm - chr2L 1957993 intron erm - chr2L 1958060 intron erm - chr2L_5_1955001 chr2L_1955001 D17-c3 73 chr2L 2004822 2004872 chr2L 2005290 2005340 13 468 6.5 5.5 6.0 1.9 518 chr2L 2004822 intron CG33543 - chr2L 2005081 intron CG33543 - chr2L 2005340 intron CG33543 - chr2L_13_2005001 chr2L_2005001 D17-c3 74 chr2L 2073332 2073347 chr2L 2073440 2073455 5 105 16.5 25.5 21.0 0.2 123 chr2L 2073332 intron dpr3 - chr2L 2073394 intron dpr3 - chr2L 2073455 intron dpr3 - chr2L_5_2070001 chr2L_2070001 D17-c3 75 chr2L 2100381 2100407 chr2L 2109546 2109550 roo 17 9165 10.5 11.5 11.0 1.4 9169 chr2L 2100381 intron dpr3 - chr2L 2104966 intron dpr3 - chr2L 2109550 intron dpr3 - chr2L_17_2100001 chr2L_2100001 D17-c3 76 chr2L 2112089 2112143 chr2L 2119774 2119830 opus 28 7672 5.5 13.5 9.5 2.7 7741 chr2L 2112089 intergenic not near genes chr2L 2115960 intergenic not near genes chr2L 2119830 intergenic not near genes chr2L_28_2115001 chr2L_2115001 D17-c3 77 chr2L 2250394 2250437 chr2L 2251185 2251224 8 791 7.5 0.0 3.8 1.7 830 chr2L 2250394 intergenic Ser12 - chr2L 2250809 exon Ser12 - chr2L 2251224 exon Ser12 - chr2L_8_2250001 chr2L_2250001 D17-c3 78 chr2L 2256448 2256478 chr2L 2256553 2256583 20 105 2.5 5.5 4.0 4.0 135 chr2L 2256448 intergenic not near genes chr2L 2256516 intergenic not near genes chr2L 2256583 intergenic not near genes chr2L_20_2255001 chr2L_2255001 D17-c3 79 chr2L 2260782 2260833 chr2L 2260893 2260944 27 111 10.0 8.5 9.2 2.6 162 chr2L 2260782 intergenic not near genes chr2L 2260863 intergenic not near genes chr2L 2260944 intergenic not near genes chr2L_27_2260001 chr2L_2260001 D17-c3 80 chr2L 2282957 2283012 chr2L 2283142 2283197 17 185 4.5 4.0 4.2 3.3 240 chr2L 2282957 intergenic not near genes chr2L 2283077 intergenic not near genes chr2L 2283197 intergenic not near genes chr2L_17_2280001 chr2L_2280001 D17-c3 81 chr2L 2294018 2294070 chr2L 2299245 2299284 copia 28 5223 7.5 12.0 9.8 2.6 5266 chr2L 2294018 intergenic not near genes chr2L 2296651 intergenic not near genes chr2L 2299284 intergenic not near genes chr2L_28_2295001 chr2L_2295001 D17-c3 82 chr2L 2299305 2299363 chr2L 2299408 2299466 21 103 10.5 8.5 9.5 2.0 161 chr2L 2299305 intergenic not near genes chr2L 2299386 intergenic not near genes chr2L 2299466 intergenic not near genes chr2L_21_2295001 chr2L_2295001 D17-c3 83 chr2L 2372344 2372401 chr2L 2372455 2372506 5 110 0.0 8.5 4.2 1.0 162 chr2L 2372344 intergenic CG3609 - chr2L 2372425 intergenic CG3609 - chr2L 2372506 3` UTR CG3609 - chr2L_5_2370001 chr2L_2370001 D17-c3 84 chr2L 2392138 2392184 chr2L 2392273 2392319 9 135 5.5 4.5 5.0 1.5 181 chr2L 2392138 intron VGlut + chr2L 2392228 intron VGlut + chr2L 2392319 intron VGlut + chr2L_9_2390001 chr2L_2390001 D17-c3 85 chr2L 2503418 2503457 chr2L 2505041 2505079 10 1623 4.5 2.5 3.5 2.2 1661 chr2L 2503418 intergenic not near genes chr2L 2504248 intergenic not near genes chr2L 2505079 intergenic not near genes chr2L_10_2500001 chr2L_2500001 D17-c3 86 chr2L 2565529 2565561 chr2L 2571627 2571659 297 17 6097 5.0 14.0 9.5 1.6 6130 chr2L 2565529 exon Cyp309a2 - chr2L 2568594 intron Cyp309a2 - chr2L 2571659 exon Cyp309a2 - chr2L_17_2565001 chr2L_2565001 D17-c3 87 chr2L 2587357 2587409 chr2L 2587620 2587672 25 261 6.5 12.0 9.2 2.5 315 chr2L 2587357 intergenic not near genes chr2L 2587514 intergenic not near genes chr2L 2587672 intergenic not near genes chr2L_25_2585001 chr2L_2585001 D17-c3 88 chr2L 2587797 2587848 chr2L 2587901 2587952 30 101 5.5 9.0 7.2 3.7 155 chr2L 2587797 intergenic not near genes chr2L 2587874 intergenic not near genes chr2L 2587952 intergenic not near genes chr2L_30_2585001 chr2L_2585001 D17-c3 89 chr2L 2618010 2618048 chr2L 2618114 2618152 14 104 5.0 2.5 3.8 2.9 142 chr2L 2618010 intergenic not near genes chr2L 2618081 intergenic not near genes chr2L 2618152 intergenic not near genes chr2L_14_2615001 chr2L_2615001 D17-c3 90 chr2L 2618325 2618379 chr2L 2618449 2618498 16 121 4.0 9.5 6.8 2.1 173 chr2L 2618325 intergenic not near genes chr2L 2618412 intergenic not near genes chr2L 2618498 intergenic not near genes chr2L_16_2615001 chr2L_2615001 D17-c3 91 chr2L 2625606 2625622 chr2L 2625707 2625723 12 101 5.0 21.5 13.2 0.8 117 chr2L 2625606 3` UTR CR45705 - chr2L 2625664 3` UTR CR45705 - chr2L 2625723 3` UTR CR45705 - chr2L_12_2625001 chr2L_2625001 D17-c3 92 chr2L 2661187 2661220 chr2L 2663050 2663083 I-element 11 1858 9.0 15.5 12.2 0.8 1896 chr2L 2661187 intergenic not near genes chr2L 2662135 intergenic not near genes chr2L 2663083 intergenic not near genes chr2L_11_2660001 chr2L_2660001 D17-c3 93 chr2L 2661227 2661230 chr2L 2663035 2663078 I-element 5 1829 8.0 10.5 9.2 0.5 1851 chr2L 2661227 intergenic not near genes chr2L 2662152 intergenic not near genes chr2L 2663078 intergenic not near genes chr2L_5_2660001 chr2L_2660001 D17-c3 94 chr2L 2698842 2698894 chr2L 2698954 2699006 22 111 0.0 4.5 2.2 6.9 164 chr2L 2698842 intron CG31690 + chr2L 2698924 intron CG31690 + chr2L 2699006 intron CG31690 + chr2L_22_2695001 chr2L_2695001 D17-c3 95 chr2L 2703423 2703443 chr2L 2703532 2703552 16 109 6.5 24.0 15.2 1.0 129 chr2L 2703423 intron CG31690 + chr2L 2703488 intron CG31690 + chr2L 2703552 intron CG31690 + chr2L_16_2700001 chr2L_2700001 D17-c3 96 chr2L 2772587 2772625 chr2L 2779194 2779234 297 16 6606 13.0 11.0 12.0 1.2 6647 chr2L 2772587 3` UTR Syt1 - chr2L 2775910 intron Syt1 - chr2L 2779234 3` UTR Syt1 - chr2L_16_2775001 chr2L_2775001 D17-c3 97 chr2L 2793919 2793970 chr2L 2794024 2794075 37 104 13.5 12.5 13.0 2.6 156 chr2L 2793919 intron Syt1 - chr2L 2793997 intron Syt1 - chr2L 2794075 intron Syt1 - chr2L_37_2790001 chr2L_2790001 D17-c3 98 chr2L 2826512 2826576 chr2L 2826629 2826674 19 110 2.0 5.5 3.8 4.0 162 chr2L 2826512 intron Duox - chr2L 2826593 intron Duox - chr2L 2826674 intron Duox - chr2L_19_2825001 chr2L_2825001 D17-c3 99 chr2L 2873414 2873469 chr2L 2873516 2873572 5 103 0.0 5.0 2.5 1.4 158 chr2L 2873414 intron CG31694 - chr2L 2873493 intron CG31694 - chr2L 2873572 intron CG31694 - chr2L_5_2870001 chr2L_2870001 D17-c3 100 chr2L 3026214 3026263 chr2L 3026868 3026894 37 638 67.5 75.0 71.2 0.5 680 chr2L 3026214 3` UTR CG3542 + chr2L 3026554 3` UTR CG3605 - chr2L 3026894 exon CG3605 - chr2L_37_3025001 chr2L_3025001 D17-c3 101 chr2L 3044880 3044933 chr2L 3045002 3045050 41 116 10.0 6.5 8.2 4.5 170 chr2L 3044880 intron v(2)k05816 + chr2L 3044965 intron v(2)k05816 + chr2L 3045050 intron v(2)k05816 + chr2L_41_3040001 chr2L_3040001 D17-c3 102 chr2L 3073010 3073054 chr2L 3078238 3078282 copia 25 5228 7.0 7.5 7.2 3.0 5272 chr2L 3073010 intron toc - chr2L 3075646 intron toc - chr2L 3078282 intron toc - chr2L_25_3075001 chr2L_3075001 D17-c3 103 chr2L 3078468 3078519 chr2L 3078803 3078844 32 334 0.5 11.0 5.8 4.7 376 chr2L 3078468 intron toc - chr2L 3078656 intron toc - chr2L 3078844 intron toc - chr2L_32_3075001 chr2L_3075001 D17-c3 104 chr2L 3114906 3114936 chr2L 3115007 3115037 6 99 0.5 7.5 4.0 1.2 131 chr2L 3114906 intron toc - chr2L 3114972 intron toc - chr2L 3115037 intron toc - chr2L_6_3110001 chr2L_3110001 D17-c3 105 chr2L 3132738 3132789 chr2L 3133921 3133972 31 1183 6.0 6.0 6.0 4.4 1234 chr2L 3132738 intron toc - chr2L 3133355 intron toc - chr2L 3133972 intron toc - chr2L_31_3130001 chr2L_3130001 D17-c3 106 chr2L 3134271 3134283 chr2L 3134372 3134384 4 101 8.0 10.0 9.0 0.4 113 chr2L 3134271 intron toc - chr2L 3134328 intron toc - chr2L 3134384 intron toc - chr2L_4_3130001 chr2L_3130001 D17-c3 107 chr2L 3134927 3134956 chr2L 3135029 3135058 7 101 3.0 4.5 3.8 1.5 131 chr2L 3134927 intron toc - chr2L 3134992 intron toc - chr2L 3135058 intron toc - chr2L_7_3130001 chr2L_3130001 D17-c3 108 chr2L 3185071 3185100 chr2L 3185172 3185201 18 100 7.5 1.5 4.5 3.3 130 chr2L 3185071 exon CG34393 - chr2L 3185136 intron CG34393 - chr2L 3185201 intron CG34393 - chr2L_18_3185001 chr2L_3185001 D17-c3 109 chr2L 3186450 3186493 chr2L 3186561 3186604 17 110 3.5 6.5 5.0 2.8 154 chr2L 3186450 intron CG34393 - chr2L 3186527 intron CG34393 - chr2L 3186604 intron CG34393 - chr2L_17_3185001 chr2L_3185001 D17-c3 110 chr2L 3192191 3192232 chr2L 3192327 3192363 13 130 12.5 7.0 9.8 1.2 172 chr2L 3192191 exon CG34393 - chr2L 3192277 intron CG34393 - chr2L 3192363 intron CG34393 - chr2L_13_3190001 chr2L_3190001 D17-c3 111 chr2L 3202720 3202768 chr2L 3210174 3210222 mdg1 12 7454 4.5 0.5 2.5 3.4 7502 chr2L 3202720 intergenic not near genes chr2L 3206471 intergenic not near genes chr2L 3210222 intergenic CR45336 + chr2L_12_3205001 chr2L_3205001 D17-c3 112 chr2L 3251473 3251517 chr2L 3259063 3259107 springer 12 7590 6.0 8.0 7.0 1.5 7634 chr2L 3251473 intergenic not near genes chr2L 3255290 intergenic not near genes chr2L 3259107 intergenic not near genes chr2L_12_3255001 chr2L_3255001 D17-c3 113 chr2L 3286110 3286143 chr2L 3286213 3286246 21 102 10.0 9.0 9.5 2.0 136 chr2L 3286110 intergenic not near genes chr2L 3286178 intergenic not near genes chr2L 3286246 intergenic not near genes chr2L_21_3285001 chr2L_3285001 D17-c3 114 chr2L 3508353 3508375 chr2L 3508456 3508478 15 103 0.0 10.5 5.2 2.4 125 chr2L 3508353 intergenic tim -,CR45299 + chr2L 3508416 intergenic CR45299 +,tim - chr2L 3508478 intergenic CR45299 +,tim - chr2L_15_3505001 chr2L_3505001 D17-c3 115 chr2L 3523020 3523043 chr2L 3523148 3523181 12 136 13.5 10.0 11.8 0.9 161 chr2L 3523020 exon Sr-CIV - chr2L 3523100 intron Sr-CIV - chr2L 3523181 exon Sr-CIV - chr2L_12_3520001 chr2L_3520001 D17-c3 116 chr2L 3523044 3523055 chr2L 3523145 3523193 7 131 7.5 9.0 8.2 0.8 149 chr2L 3523044 exon Sr-CIV - chr2L 3523118 intron Sr-CIV - chr2L 3523193 exon Sr-CIV - chr2L_7_3520001 chr2L_3520001 D17-c3 117 chr2L 3557119 3557147 chr2L 3557594 3557622 4 474 29.0 18.0 23.5 0.2 503 chr2L 3557119 intergenic not near genes chr2L 3557370 intergenic not near genes chr2L 3557622 intergenic not near genes chr2L_4_3555001 chr2L_3555001 D17-c3 118 chr2L 3601068 3601115 chr2L 3601178 3601213 11 106 6.5 6.5 6.5 1.5 145 chr2L 3601068 intergenic not near genes chr2L 3601140 intergenic not near genes chr2L 3601213 intergenic not near genes chr2L_11_3600001 chr2L_3600001 D17-c3 119 chr2L 3634083 3634129 chr2L 3634190 3634236 21 107 7.5 9.5 8.5 2.2 153 chr2L 3634083 intron for - chr2L 3634160 intron for - chr2L 3634236 intron for - chr2L_21_3630001 chr2L_3630001 D17-c3 120 chr2L 3649763 3649805 chr2L 3654990 3655031 copia 11 5227 0.5 3.0 1.8 3.9 5268 chr2L 3649763 intron for - chr2L 3652397 intron for - chr2L 3655031 intron for - chr2L_11_3650001 chr2L_3650001 D17-c3 121 chr2L 3734633 3734684 chr2L 3734735 3734786 19 102 3.5 4.5 4.0 3.8 153 chr2L 3734633 intron CG10019 + chr2L 3734710 intron CG10019 + chr2L 3734786 intron CG10019 + chr2L_19_3730001 chr2L_3730001 D17-c3 122 chr2L 3819601 3819629 chr2L 3819702 3819730 7 101 0.0 8.5 4.2 1.3 129 chr2L 3819601 intergenic not near genes chr2L 3819666 intergenic not near genes chr2L 3819730 intergenic not near genes chr2L_7_3815001 chr2L_3815001 D17-c3 123 chr2L 3831813 3831857 chr2L 3831919 3831962 5 106 7.5 2.0 4.8 0.9 149 chr2L 3831813 intergenic not near genes chr2L 3831888 intergenic not near genes chr2L 3831962 intergenic not near genes chr2L_5_3830001 chr2L_3830001 D17-c3 124 chr2L 3862402 3862521 chr2L 3862511 3862633 8 111 0.0 0.0 0.0 8.0 231 chr2L 3862402 intergenic CG3964 +,CR44078 - chr2L 3862518 intergenic CG3964 +,CR44078 - chr2L 3862633 intergenic CG3964 + chr2L_8_3860001 chr2L_3860001 D17-c3 125 chr2L 3891867 3891919 chr2L 3891977 3892029 15 109 1.5 3.5 2.5 4.3 162 chr2L 3891867 intron capu - chr2L 3891948 intron capu - chr2L 3892029 intron capu - chr2L_15_3890001 chr2L_3890001 D17-c3 126 chr2L 3936632 3936654 chr2L 3936737 3936758 7 105 3.5 9.5 6.5 0.9 126 chr2L 3936632 intron fred - chr2L 3936695 intron fred - chr2L 3936758 intron fred - chr2L_7_3935001 chr2L_3935001 D17-c3 127 chr2L 3943772 3943827 chr2L 3943888 3943943 12 116 5.0 5.0 5.0 2.0 171 chr2L 3943772 intron fred - chr2L 3943858 intron fred - chr2L 3943943 intron fred - chr2L_12_3940001 chr2L_3940001 D17-c3 128 chr2L 3959149 3959205 chr2L 3959250 3959306 16 101 4.0 2.0 3.0 4.0 157 chr2L 3959149 intron fred - chr2L 3959228 intron fred - chr2L 3959306 intron fred - chr2L_16_3955001 chr2L_3955001 D17-c3 129 chr2L 3997522 3997580 chr2L 3997638 3997693 7 115 0.0 6.0 3.0 1.8 171 chr2L 3997522 intergenic not near genes chr2L 3997608 intergenic not near genes chr2L 3997693 intergenic not near genes chr2L_7_3995001 chr2L_3995001 D17-c3 130 chr2L 4179301 4179359 chr2L 4179807 4179865 9 505 32.5 24.0 28.2 0.3 564 chr2L 4179301 intergenic not near genes chr2L 4179583 intergenic not near genes chr2L 4179865 intergenic not near genes chr2L_9_4175001 chr2L_4175001 D17-c3 131 chr2L 2770906 2770949 chr2L 4610648 4610691 10 1839742 49.5 40.5 45.0 0.2 1839785 chr2L 2770906 3` UTR CG15399 - chr2L 3690798 intron CG34340 + chr2L 4610691 intron dp - chr2L_10_3690001 chr2L_3690001 D17-c3 132 chr2L 4661818 4661854 chr2L 4669423 4669459 opus 21 7605 11.0 13.5 12.2 1.6 7641 chr2L 4661818 intergenic not near genes chr2L 4665638 intergenic not near genes chr2L 4669459 intergenic not near genes chr2L_21_4665001 chr2L_4665001 D17-c3 133 chr2L 4819471 4819518 chr2L 4819619 4819666 15 147 7.0 10.0 8.5 1.6 195 chr2L 4819471 intergenic not near genes chr2L 4819568 intergenic not near genes chr2L 4819666 intergenic not near genes chr2L_15_4815001 chr2L_4815001 D17-c3 134 chr2L 4841049 4841103 chr2L 4841150 4841204 30 101 13.0 12.0 12.5 2.2 155 chr2L 4841049 intron CG12194 + chr2L 4841126 intron CG12194 + chr2L 4841204 3` UTR CG12194 + chr2L_30_4840001 chr2L_4840001 D17-c3 135 chr2L 4858450 4858460 chr2L 4858563 4858573 4 113 9.5 0.5 5.0 0.7 123 chr2L 4858450 intron pog + chr2L 4858512 intron pog + chr2L 4858573 intron pog + chr2L_4_4855001 chr2L_4855001 D17-c3 136 chr2L 4862262 4862308 chr2L 4862358 4862409 26 100 9.5 10.0 9.8 2.4 147 chr2L 4862262 intron pog + chr2L 4862336 intron pog + chr2L 4862409 intron pog + chr2L_26_4860001 chr2L_4860001 D17-c3 137 chr2L 4896422 4896474 chr2L 4896539 4896591 17 117 8.5 4.0 6.2 2.4 169 chr2L 4896422 intron CG3036 + chr2L 4896506 intron CG3036 + chr2L 4896591 intron CG3036 + chr2L_17_4895001 chr2L_4895001 D17-c3 138 chr2L 4918150 4918190 chr2L 4923248 4923326 jockey 5 5106 4.5 0.5 2.5 1.4 5176 chr2L 4918150 intron hoe1 - chr2L 4920738 intron hoe1 - chr2L 4923326 intron hoe1 - chr2L_5_4920001 chr2L_4920001 D17-c3 139 chr2L 4925654 4925689 chr2L 4925758 4925793 5 104 6.0 4.5 5.2 0.8 139 chr2L 4925654 intron hoe1 - chr2L 4925724 intron hoe1 - chr2L 4925793 intron hoe1 - chr2L_5_4925001 chr2L_4925001 D17-c3 140 chr2L 5027954 5027992 chr2L 5028063 5028084 10 106 4.5 12.0 8.2 1.1 130 chr2L 5027954 intron vkg - chr2L 5028019 intron vkg - chr2L 5028084 intron vkg - chr2L_10_5025001 chr2L_5025001 D17-c3 141 chr2L 5117272 5117319 chr2L 5117379 5117426 14 107 7.5 7.0 7.2 1.7 154 chr2L 5117272 intron Msp300 + chr2L 5117349 intron Msp300 + chr2L 5117426 intron Msp300 + chr2L_14_5115001 chr2L_5115001 D17-c3 142 chr2L 5120960 5121006 chr2L 5121068 5121125 17 116 6.5 0.5 3.5 3.8 165 chr2L 5120960 intron Msp300 + chr2L 5121042 intron Msp300 + chr2L 5121125 intron Msp300 + chr2L_17_5120001 chr2L_5120001 D17-c3 143 chr2L 5207790 5207848 chr2L 5213778 5213833 33 5985 54.0 45.0 49.5 0.7 6043 chr2L 5207790 exon Cyp28d2 + chr2L 5210812 exon Cyp28d1 + chr2L 5213833 intron CG7742 - chr2L_33_5210001 chr2L_5210001 D17-c3 144 chr2L 5242936 5242938 chr2L 16217660 16217660 8 10974723 43.0 35.0 39.0 0.2 10974724 chr2L 5242936 intron tkv - chr2L 10730298 3` UTR,5` UTR CG6443 +,CG17118 + chr2L 16217660 intergenic not near genes chr2L_8_10730001 chr2L_10730001 D17-c3 145 chr2L 5262503 5262541 chr2L 5262605 5262643 19 99 14.5 18.0 16.2 1.1 140 chr2L 5262503 intron tkv - chr2L 5262573 intron tkv - chr2L 5262643 intron tkv - chr2L_19_5260001 chr2L_5260001 D17-c3 146 chr2L 5342749 5342795 chr2L 5345154 5345200 Doc 11 2405 4.0 3.0 3.5 2.4 2451 chr2L 5342749 intergenic not near genes chr2L 5343974 intergenic not near genes chr2L 5345200 intergenic not near genes chr2L_11_5340001 chr2L_5340001 D17-c3 147 chr2L 5378405 5378447 chr2L 5378509 5378551 19 104 9.5 5.0 7.2 2.3 146 chr2L 5378405 intergenic not near genes chr2L 5378478 intergenic not near genes chr2L 5378551 intergenic not near genes chr2L_19_5375001 chr2L_5375001 D17-c3 148 chr2L 5398002 5398041 chr2L 5398092 5398133 18 90 4.0 11.5 7.8 2.0 131 chr2L 5398002 intergenic not near genes chr2L 5398068 intergenic not near genes chr2L 5398133 intergenic not near genes chr2L_18_5395001 chr2L_5395001 D17-c3 149 chr2L 5403116 5403167 chr2L 5403234 5403285 5 118 1.5 0.5 1.0 2.5 169 chr2L 5403116 intergenic not near genes chr2L 5403200 intergenic not near genes chr2L 5403285 intergenic not near genes chr2L_5_5400001 chr2L_5400001 D17-c3 150 chr2L 5475130 5475161 chr2L 5475260 5475291 11 130 5.0 3.5 4.2 2.1 161 chr2L 5475130 intergenic not near genes chr2L 5475210 intergenic not near genes chr2L 5475291 intergenic not near genes chr2L_11_5475001 chr2L_5475001 D17-c3 151 chr2L 5487992 5488034 chr2L 5488097 5488139 16 105 7.5 8.0 7.8 1.8 147 chr2L 5487992 intergenic not near genes chr2L 5488066 intergenic not near genes chr2L 5488139 intergenic not near genes chr2L_16_5485001 chr2L_5485001 D17-c3 152 chr2L 5766873 5766915 chr2L 5767451 5767493 5 578 6.5 22.5 14.5 0.3 620 chr2L 5766873 intergenic CG9171 - chr2L 5767183 3` UTR CG9171 - chr2L 5767493 3` UTR CG9171 - chr2L_5_5765001 chr2L_5765001 D17-c3 153 chr2L 5827688 5827738 chr2L 5836721 5836771 roo 16 9032 6.5 9.0 7.8 1.8 9083 chr2L 5827688 intron TrissinR + chr2L 5832230 intron TrissinR + chr2L 5836771 intron TrissinR + chr2L_16_5830001 chr2L_5830001 D17-c3 154 chr2L 5839150 5839178 chr2L 5839264 5839292 9 114 7.5 12.0 9.8 0.8 142 chr2L 5839150 intron TrissinR + chr2L 5839221 intron TrissinR + chr2L 5839292 intron TrissinR + chr2L_9_5835001 chr2L_5835001 D17-c3 155 chr2L 5839180 5839192 chr2L 5839252 5839279 15 98 6.5 6.5 6.5 2.0 99 chr2L 5839180 intron TrissinR + chr2L 5839230 intron TrissinR + chr2L 5839279 intron TrissinR + chr2L_15_5835001 chr2L_5835001 D17-c3 156 chr2L 5864645 5864703 chr2L 5865590 5865648 20 942 9.0 3.5 6.2 2.8 1003 chr2L 5864645 intron rau - chr2L 5865146 intron rau - chr2L 5865648 intron rau - chr2L_20_5865001 chr2L_5865001 D17-c3 157 chr2L 5870454 5870506 chr2L 5870556 5870608 25 101 10.0 11.0 10.5 2.2 154 chr2L 5870454 intron rau - chr2L 5870531 intron rau - chr2L 5870608 intron rau - chr2L_25_5870001 chr2L_5870001 D17-c3 158 chr2L 5887578 5887634 chr2L 5887684 5887740 25 106 3.0 5.0 4.0 5.0 162 chr2L 5887578 3` UTR CR44577 - chr2L 5887659 3` UTR CR44577 - chr2L 5887740 3` UTR CR44577 - chr2L_25_5885001 chr2L_5885001 D17-c3 159 chr2L 5926247 5926453 chr2L 5926352 5926566 7 148 0.0 0.0 0.0 7.0 319 chr2L 5926247 intron dsf + chr2L 5926406 intron dsf + chr2L 5926566 intron dsf + chr2L_7_5925001 chr2L_5925001 D17-c3 160 chr2L 5931291 5931332 chr2L 5931428 5931469 15 137 3.0 6.0 4.5 2.7 178 chr2L 5931291 intron dsf + chr2L 5931380 intron dsf + chr2L 5931469 intron dsf + chr2L_15_5930001 chr2L_5930001 D17-c3 161 chr2L 5944554 5944589 chr2L 5948971 5949006 16 4417 78.0 31.0 54.5 0.3 4452 chr2L 5944554 intron Gpdh + chr2L 5946780 intron Gpdh + chr2L 5949006 intergenic Gpdh +,CG9044 + chr2L_16_5945001 chr2L_5945001 D17-c3 162 chr2L 5989007 5989065 chr2L 5989108 5989166 26 101 5.0 0.5 2.8 6.8 159 chr2L 5989007 intergenic ifc +,lid - chr2L 5989086 intergenic ifc +,lid - chr2L 5989166 intergenic lid -,ifc + chr2L_26_5985001 chr2L_5985001 D17-c3 163 chr2L 6002417 6002460 chr2L 6002528 6002571 11 111 3.5 6.0 4.8 1.9 154 chr2L 6002417 3` UTR Tsp26A + chr2L 6002494 3` UTR Tsp26A + chr2L 6002571 3` UTR Tsp26A + chr2L_11_6000001 chr2L_6000001 D17-c3 164 chr2L 6050418 6050462 chr2L 6050547 6050591 18 128 4.5 1.5 3.0 4.5 173 chr2L 6050418 3` UTR CG12393 + chr2L 6050504 intergenic CG12393 +,CG9135 + chr2L 6050591 intergenic CG12393 +,CG9135 + chr2L_18_6050001 chr2L_6050001 D17-c3 165 chr2L 6079470 6079523 chr2L 6079577 6079629 27 106 7.5 5.5 6.5 3.6 159 chr2L 6079470 5` UTR CR9162 + chr2L 6079550 5` UTR CR9162 + chr2L 6079629 5` UTR CR9162 + chr2L_27_6075001 chr2L_6075001 D17-c3 166 chr2L 6136528 6136582 chr2L 6136650 6136704 12 122 2.0 4.5 3.2 2.9 176 chr2L 6136528 intergenic not near genes chr2L 6136616 intergenic not near genes chr2L 6136704 intergenic not near genes chr2L_12_6135001 chr2L_6135001 D17-c3 167 chr2L 6138715 6138748 chr2L 6138856 6138889 10 141 2.5 1.0 1.8 3.6 174 chr2L 6138715 intergenic CR44824 - chr2L 6138802 intergenic CR44824 - chr2L 6138889 3` UTR CR44824 - chr2L_10_6135001 chr2L_6135001 D17-c3 168 chr2L 6154432 6154489 chr2L 6154533 6154589 30 96 6.0 3.0 4.5 5.5 157 chr2L 6154432 intron CG31639 - chr2L 6154510 intron CG31639 - chr2L 6154589 intron CG31639 - chr2L_30_6150001 chr2L_6150001 D17-c3 169 chr2L 6155350 6155400 chr2L 6155451 6155501 18 101 12.5 5.5 9.0 1.8 151 chr2L 6155350 intergenic CG31639 - chr2L 6155426 intergenic CG31639 - chr2L 6155501 intergenic CG31639 - chr2L_18_6155001 chr2L_6155001 D17-c3 170 chr2L 6185900 6185952 chr2L 6186005 6186057 17 104 6.5 6.5 6.5 2.3 157 chr2L 6185900 intron CG34380 + chr2L 6185978 intron CG34380 + chr2L 6186057 intron CG34380 + chr2L_17_6185001 chr2L_6185001 D17-c3 171 chr2L 6241636 6241687 chr2L 6241739 6241790 23 103 9.0 6.0 7.5 2.7 154 chr2L 6241636 intergenic not near genes chr2L 6241713 intergenic not near genes chr2L 6241790 intergenic not near genes chr2L_23_6240001 chr2L_6240001 D17-c3 172 chr2L 6242952 6242985 chr2L 6243075 6243108 18 123 8.0 6.0 7.0 2.2 156 chr2L 6242952 intergenic not near genes chr2L 6243030 intergenic not near genes chr2L 6243108 intergenic not near genes chr2L_18_6240001 chr2L_6240001 D17-c3 173 chr2L 6261584 6261594 chr2L 6261760 6261771 4 177 3.5 11.0 7.2 0.5 187 chr2L 6261584 intron Ddr + chr2L 6261678 intron Ddr + chr2L 6261771 intron Ddr + chr2L_4_6260001 chr2L_6260001 D17-c3 174 chr2L 6261601 6261619 chr2L 6261759 6261761 4 156 4.0 11.0 7.5 0.5 160 chr2L 6261601 intron Ddr + chr2L 6261681 intron Ddr + chr2L 6261761 intron Ddr + chr2L_4_6260001 chr2L_6260001 D17-c3 175 chr2L 6279617 6279652 chr2L 6279721 6279756 INE-1 15 104 5.5 1.5 3.5 3.3 139 chr2L 6279617 intron Ddr + chr2L 6279686 intron Ddr + chr2L 6279756 intron Ddr + chr2L_15_6275001 chr2L_6275001 D17-c3 176 chr2L 6283917 6283975 chr2L 6284053 6284111 7 136 6.5 2.5 4.5 1.3 194 chr2L 6283917 intron Ddr + chr2L 6284014 intron Ddr + chr2L 6284111 intron Ddr + chr2L_7_6280001 chr2L_6280001 D17-c3 177 chr2L 6312356 6312364 chr2L 6312458 6312466 4 102 0.0 12.0 6.0 0.6 110 chr2L 6312356 intron Ddr + chr2L 6312411 intron Ddr + chr2L 6312466 intron Ddr + chr2L_4_6310001 chr2L_6310001 D17-c3 178 chr2L 6349056 6349070 chr2L 6349159 6349172 7 103 3.5 6.0 4.8 1.2 116 chr2L 6349056 intergenic CG9498 - chr2L 6349114 intergenic CG9498 - chr2L 6349172 intergenic CG9498 - chr2L_7_6345001 chr2L_6345001 D17-c3 179 chr2L 6363127 6363181 chr2L 6366074 6366132 Burdock 25 2948 6.5 8.5 7.5 2.9 3005 chr2L 6363127 intergenic not near genes chr2L 6364630 intergenic not near genes chr2L 6366132 intergenic not near genes chr2L_25_6360001 chr2L_6360001 D17-c3 180 chr2L 6414969 6415011 chr2L 6415085 6415127 7 116 7.0 6.5 6.8 0.9 158 chr2L 6414969 3` UTR CG13982 + chr2L 6415048 3` UTR CG13982 + chr2L 6415127 3` UTR CG13982 + chr2L_7_6415001 chr2L_6415001 D17-c3 181 chr2L 6426830 6426888 chr2L 6445114 6445173 roo 27 18285 9.5 12.0 10.8 2.3 18343 chr2L 6426830 3` UTR CG9527 - chr2L 6436002 intron CG9527 - chr2L 6445173 exon CG9527 - chr2L_27_6435001 chr2L_6435001 D17-c3 182 chr2L 6463536 6463538 chr2L 6463653 6463655 4 117 61.0 28.0 44.5 0.1 119 chr2L 6463536 exon CG16947 - chr2L 6463596 exon CG16947 - chr2L 6463655 exon CG16947 - chr2L_4_6460001 chr2L_6460001 D17-c3 183 chr2L 6463540 6463581 chr2L 6463647 6463658 19 106 44.0 29.0 36.5 0.5 118 chr2L 6463540 exon CG16947 - chr2L 6463599 exon CG16947 - chr2L 6463658 exon CG16947 - chr2L_19_6460001 chr2L_6460001 D17-c3 184 chr2L 6516019 6516074 chr2L 6516126 6516181 15 106 14.0 17.0 15.5 0.9 162 chr2L 6516019 intron CG31637 + chr2L 6516100 intron CG31637 + chr2L 6516181 intron CG31637 + chr2L_15_6515001 chr2L_6515001 D17-c3 185 chr2L 6526957 6527003 chr2L 6527068 6527114 8 110 13.5 11.0 12.2 0.6 157 chr2L 6526957 3` UTR CG31637 + chr2L 6527036 intergenic CG31637 +,eya - chr2L 6527114 intergenic CG31637 +,eya - chr2L_8_6525001 chr2L_6525001 D17-c3 186 chr2L 6544354 6544390 chr2L 6544471 6544507 6 116 8.5 3.5 6.0 0.9 153 chr2L 6544354 intron eya - chr2L 6544430 intron eya - chr2L 6544507 intron eya - chr2L_6_6540001 chr2L_6540001 D17-c3 187 chr2L 6590074 6590122 chr2L 6590177 6590217 12 99 10.5 8.0 9.2 1.2 143 chr2L 6590074 intron CG11319 - chr2L 6590146 intron CG11319 - chr2L 6590217 intron CG11319 - chr2L_12_6590001 chr2L_6590001 D17-c3 188 chr2L 6600026 6600079 chr2L 6600174 6600217 11 131 29.5 22.0 25.8 0.4 191 chr2L 6600026 intron CG11319 - chr2L 6600122 intron CG11319 - chr2L 6600217 intron CG11319 - chr2L_11_6600001 chr2L_6600001 D17-c3 189 chr2L 6626865 6626918 chr2L 6626975 6627021 12 108 17.0 19.5 18.2 0.6 156 chr2L 6626865 intron Oatp26F - chr2L 6626943 intron Oatp26F - chr2L 6627021 intron Oatp26F - chr2L_12_6625001 chr2L_6625001 D17-c3 190 chr2L 6724505 6724550 chr2L 6724613 6724658 8 108 11.5 15.0 13.2 0.6 153 chr2L 6724505 intron Liprin-alpha + chr2L 6724582 intron Liprin-alpha + chr2L 6724658 intron Liprin-alpha + chr2L_8_6720001 chr2L_6720001 D17-c3 191 chr2L 6744540 6744597 chr2L 6744651 6744708 12 111 14.5 17.0 15.8 0.7 168 chr2L 6744540 intron CG11221 + chr2L 6744624 intron CG11221 + chr2L 6744708 intron,exon CG11221 +,CG31910 - chr2L_12_6740001 chr2L_6740001 D17-c3 192 chr2L 6771961 6772022 chr2L 6772073 6772094 8 103 30.5 28.5 29.5 0.3 133 chr2L 6771961 intron CG11321 - chr2L 6772028 intron CG11321 - chr2L 6772094 intron CG11321 - chr2L_8_6770001 chr2L_6770001 D17-c3 193 chr2L 6772565 6772592 chr2L 6772673 6772684 5 100 6.5 15.0 10.8 0.4 119 chr2L 6772565 5` UTR CG11321 - chr2L 6772624 5` UTR CG11321 - chr2L 6772684 5` UTR CG11321 - chr2L_5_6770001 chr2L_6770001 D17-c3 194 chr2L 6787898 6787915 chr2L 6789824 6789841 6 1926 33.5 23.5 28.5 0.2 1943 chr2L 6787898 intergenic not near genes chr2L 6788870 intergenic not near genes chr2L 6789841 3` UTR nrv2 - chr2L_6_6785001 chr2L_6785001 D17-c3 195 chr2L 6799525 6799566 chr2L 6799631 6799632 8 106 12.0 9.0 10.5 0.7 107 chr2L 6799525 5` UTR CR43610 + chr2L 6799578 5` UTR CR43610 + chr2L 6799632 intergenic CR43610 +,CG17376 - chr2L_8_6795001 chr2L_6795001 D17-c3 196 chr2L 6823163 6823192 chr2L 6823273 6823302 5 110 16.5 9.0 12.8 0.4 139 chr2L 6823163 intron sens-2 + chr2L 6823232 intron sens-2 + chr2L 6823302 intron sens-2 + chr2L_5_6820001 chr2L_6820001 D17-c3 197 chr2L 6833362 6833418 chr2L 6833474 6833514 10 109 12.5 13.0 12.8 0.7 152 chr2L 6833362 intron sens-2 + chr2L 6833438 intron sens-2 + chr2L 6833514 intron sens-2 + chr2L_10_6830001 chr2L_6830001 D17-c3 198 chr2L 6876775 6876807 chr2L 6882965 6883023 diver 14 6210 7.0 4.5 5.8 2.1 6248 chr2L 6876775 intron Nlg2 + chr2L 6879899 intron Nlg2 + chr2L 6883023 intron Nlg2 + chr2L_14_6875001 chr2L_6875001 D17-c3 199 chr2L 6887472 6887528 chr2L 6887647 6887705 11 175 5.5 0.0 2.8 2.9 233 chr2L 6887472 intron Nlg2 + chr2L 6887588 intron Nlg2 + chr2L 6887705 intron Nlg2 + chr2L_11_6885001 chr2L_6885001 D17-c3 200 chr2L 6891423 6891468 chr2L 6891546 6891591 10 123 4.5 6.5 5.5 1.5 168 chr2L 6891423 intron Nlg2 + chr2L 6891507 intron Nlg2 + chr2L 6891591 intron Nlg2 + chr2L_10_6890001 chr2L_6890001 D17-c3 201 chr2L 6969253 6969307 chr2L 6969358 6969412 22 105 8.5 10.0 9.2 2.2 159 chr2L 6969253 3` UTR snRNP-U1-70K - chr2L 6969332 3` UTR snRNP-U1-70K - chr2L 6969412 3` UTR snRNP-U1-70K - chr2L_22_6965001 chr2L_6965001 D17-c3 202 chr2L 6991392 6991434 chr2L 6998551 6998582 HMS-Beagle 4 7156 0.5 5.0 2.8 1.1 7190 chr2L 6991392 intron uif - chr2L 6994987 intron uif - chr2L 6998582 intron uif - chr2L_4_6990001 chr2L_6990001 D17-c3 203 chr2L 7005206 7005253 chr2L 7005327 7005374 10 121 2.5 2.0 2.2 3.1 168 chr2L 7005206 intron uif - chr2L 7005290 intron uif - chr2L 7005374 intron uif - chr2L_10_7005001 chr2L_7005001 D17-c3 204 chr2L 7043513 7043528 chr2L 7043672 7043687 11 159 0.0 2.5 1.2 5.0 174 chr2L 7043513 intron milt + chr2L 7043600 intron milt + chr2L 7043687 intron milt + chr2L_11_7040001 chr2L_7040001 D17-c3 205 chr2L 7100960 7100969 chr2L 7101211 7101220 8 251 20.5 8.0 14.2 0.5 260 chr2L 7100960 intron Pvf3 - chr2L 7101090 intron Pvf3 - chr2L 7101220 intron Pvf3 - chr2L_8_7100001 chr2L_7100001 D17-c3 206 chr2L 7100970 7100991 chr2L 7101209 7101242 12 249 16.0 8.0 12.0 0.9 272 chr2L 7100970 intron Pvf3 - chr2L 7101106 intron Pvf3 - chr2L 7101242 intron Pvf3 - chr2L_12_7100001 chr2L_7100001 D17-c3 207 chr2L 7100992 7101016 chr2L 7101208 7101255 12 246 8.5 8.0 8.2 1.3 263 chr2L 7100992 intron Pvf3 - chr2L 7101124 intron Pvf3 - chr2L 7101255 intron Pvf3 - chr2L_12_7100001 chr2L_7100001 D17-c3 208 chr2L 7111741 7111753 chr2L 7111846 7111862 5 109 11.5 5.0 8.2 0.5 121 chr2L 7111741 intron Pvf3 - chr2L 7111802 intron Pvf3 - chr2L 7111862 intron Pvf3 - chr2L_5_7110001 chr2L_7110001 D17-c3 209 chr2L 7162731 7162782 chr2L 7162846 7162897 16 115 2.5 3.5 3.0 4.0 166 chr2L 7162731 intergenic not near genes chr2L 7162814 intergenic not near genes chr2L 7162897 intergenic not near genes chr2L_16_7160001 chr2L_7160001 D17-c3 210 chr2L 7218378 7218434 chr2L 7218481 7218537 9 103 4.5 3.5 4.0 1.8 159 chr2L 7218378 intron CG13784 - chr2L 7218458 intron CG13784 - chr2L 7218537 intron CG13784 - chr2L_9_7215001 chr2L_7215001 D17-c3 211 chr2L 7246533 7246580 chr2L 7247417 7247464 5 884 1.5 5.5 3.5 1.1 931 chr2L 7246533 intron Ndae1 - chr2L 7246998 intron Ndae1 - chr2L 7247464 intron Ndae1 - chr2L_5_7245001 chr2L_7245001 D17-c3 212 chr2L 7325890 7325940 chr2L 7326000 7326050 37 110 10.5 10.0 10.2 3.3 160 chr2L 7325890 intergenic not near genes chr2L 7325970 intergenic not near genes chr2L 7326050 intergenic not near genes chr2L_37_7325001 chr2L_7325001 D17-c3 213 chr2L 7326462 7326503 chr2L 7326605 7326646 7 142 8.0 5.0 6.5 0.9 184 chr2L 7326462 intergenic not near genes chr2L 7326554 intergenic not near genes chr2L 7326646 intergenic not near genes chr2L_7_7325001 chr2L_7325001 D17-c3 214 chr2L 7331650 7331709 chr2L 7331771 7331831 28 121 6.5 5.0 5.8 4.1 181 chr2L 7331650 intergenic not near genes chr2L 7331740 intergenic not near genes chr2L 7331831 intergenic not near genes chr2L_28_7330001 chr2L_7330001 D17-c3 215 chr2L 7343304 7343355 chr2L 7350444 7350496 roo 35 7140 11.5 7.5 9.5 3.3 7192 chr2L 7343304 intron Wnt6 + chr2L 7346900 intron Wnt6 + chr2L 7350496 intron Wnt6 + chr2L_35_7345001 chr2L_7345001 D17-c3 216 chr2L 7358276 7358311 chr2L 7358380 7358415 14 103 4.0 1.0 2.5 4.0 139 chr2L 7358276 intergenic not near genes chr2L 7358346 intergenic not near genes chr2L 7358415 intergenic not near genes chr2L_14_7355001 chr2L_7355001 D17-c3 217 chr2L 7406924 7406961 chr2L 7407056 7407065 5 126 0.0 0.0 0.0 5.0 141 chr2L 7406924 intron CG5177 + chr2L 7406994 intron CG5177 + chr2L 7407065 intron CG5177 + chr2L_5_7405001 chr2L_7405001 D17-c3 218 chr2L 7410603 7410649 chr2L 7410864 7410910 16 261 7.0 8.5 7.8 1.8 307 chr2L 7410603 intergenic CG15818 + chr2L 7410756 intergenic CG15818 + chr2L 7410910 5` UTR CG15818 + chr2L_16_7410001 chr2L_7410001 D17-c3 219 chr2L 7502716 7502768 chr2L 7502811 7502864 49 99 13.0 13.5 13.2 3.5 148 chr2L 7502716 intron RapGAP1 - chr2L 7502790 intron RapGAP1 - chr2L 7502864 intron RapGAP1 - chr2L_49_7500001 chr2L_7500001 D17-c3 220 chr2L 7548098 7548113 chr2L 7550559 7550559 Burdock 4 2456 8.0 16.0 12.0 0.3 2461 chr2L 7548098 intron RapGAP1 - chr2L 7549328 intron RapGAP1 - chr2L 7550559 intron RapGAP1 - chr2L_4_7545001 chr2L_7545001 D17-c3 221 chr2L 7572441 7572492 chr2L 7572616 7572667 21 175 7.0 6.5 6.8 2.7 226 chr2L 7572441 intron RapGAP1 - chr2L 7572554 intron RapGAP1 - chr2L 7572667 intron RapGAP1 - chr2L_21_7570001 chr2L_7570001 D17-c3 222 chr2L 7585484 7585487 chr2L 7585608 7585611 5 124 11.5 4.5 8.0 0.6 127 chr2L 7585484 intergenic not near genes chr2L 7585548 intergenic not near genes chr2L 7585611 intergenic not near genes chr2L_5_7585001 chr2L_7585001 D17-c3 223 chr2L 7609515 7609545 chr2L 7609628 7609665 14 120 11.0 4.0 7.5 1.6 150 chr2L 7609515 intron CG6739 + chr2L 7609590 intron CG6739 + chr2L 7609665 intron CG6739 + chr2L_14_7605001 chr2L_7605001 D17-c3 224 chr2L 7609547 7609744 chr2L 7609625 7609846 22 104 7.0 3.0 5.0 3.7 299 chr2L 7609547 intron CG6739 + chr2L 7609696 intron CG6739 + chr2L 7609846 intron CG6739 + chr2L_22_7605001 chr2L_7605001 D17-c3 225 chr2L 7625167 7625192 chr2L 7625290 7625315 10 123 9.0 14.0 11.5 0.8 148 chr2L 7625167 intergenic not near genes chr2L 7625241 intergenic not near genes chr2L 7625315 intergenic not near genes chr2L_10_7625001 chr2L_7625001 D17-c3 226 chr2L 7775609 7775657 chr2L 7775726 7775774 16 117 14.0 5.0 9.5 1.5 165 chr2L 7775609 intergenic CG7179 - chr2L 7775692 intergenic CG7179 - chr2L 7775774 intergenic CG7179 - chr2L_16_7775001 chr2L_7775001 D17-c3 227 chr2L 7781227 7781258 chr2L 7781351 7781359 7 120 20.5 5.5 13.0 0.5 132 chr2L 7781227 exon Uro + chr2L 7781293 3` UTR Uro + chr2L 7781359 3` UTR Uro + chr2L_7_7780001 chr2L_7780001 D17-c3 228 chr2L 7867545 7867598 chr2L 7867664 7867717 15 119 7.5 6.5 7.0 1.9 172 chr2L 7867545 intron Proc - chr2L 7867631 intron Proc - chr2L 7867717 intron Proc - chr2L_15_7865001 chr2L_7865001 D17-c3 229 chr2L 7905868 7905875 chr2L 7905965 7906007 6 126 9.0 15.5 12.2 0.5 139 chr2L 7905868 intron Snoo - chr2L 7905938 intron Snoo - chr2L 7906007 intron Snoo - chr2L_6_7905001 chr2L_7905001 D17-c3 230 chr2L 7941174 7941196 chr2L 7941278 7941300 16 101 11.5 18.5 15.0 1.0 126 chr2L 7941174 intron Snoo - chr2L 7941237 intron Snoo - chr2L 7941300 intron Snoo - chr2L_16_7940001 chr2L_7940001 D17-c3 231 chr2L 7959016 7959071 chr2L 7960452 7960509 pogo 20 1436 6.0 1.0 3.5 4.4 1493 chr2L 7959016 intron Snoo - chr2L 7959762 intron Snoo - chr2L 7960509 intron Snoo - chr2L_20_7955001 chr2L_7955001 D17-c3 232 chr2L 7973907 7973933 chr2L 7974035 7974061 12 128 5.5 15.0 10.2 1.1 154 chr2L 7973907 intron Snoo - chr2L 7973984 intron Snoo - chr2L 7974061 intron Snoo - chr2L_12_7970001 chr2L_7970001 D17-c3 233 chr2L 7977064 7977080 chr2L 7984064 7984080 297 11 7000 32.0 17.5 24.8 0.4 7016 chr2L 7977064 intron Snoo - chr2L 7980572 intron Snoo - chr2L 7984080 intron,5` UTR Snoo -,CG7231 + chr2L_11_7980001 chr2L_7980001 D17-c3 234 chr2L 7977084 7977113 chr2L 7984063 7984113 297 18 6998 15.0 17.5 16.2 1.0 7029 chr2L 7977084 intron Snoo - chr2L 7980598 intron Snoo - chr2L 7984113 intron,5` UTR Snoo -,CG7231 + chr2L_18_7980001 chr2L_7980001 D17-c3 235 chr2L 8013592 8013608 chr2L 8018821 8018837 copia 9 5229 8.0 0.0 4.0 1.8 5245 chr2L 8013592 intron Tg + chr2L 8016214 intron Tg + chr2L 8018837 intron Tg + chr2L_9_8015001 chr2L_8015001 D17-c3 236 chr2L 8018816 8018834 chr2L 8023623 8023643 Doc 12 4809 0.0 9.5 4.8 2.1 4827 chr2L 8018816 intron Tg + chr2L 8021230 intron Tg + chr2L 8023643 intron Tg + chr2L_12_8020001 chr2L_8020001 D17-c3 237 chr2L 8044070 8044130 chr2L 8044174 8044234 42 103 10.0 11.5 10.8 3.6 164 chr2L 8044070 exon CG7466 + chr2L 8044152 intron CG7466 + chr2L 8044234 intron CG7466 + chr2L_42_8040001 chr2L_8040001 D17-c3 238 chr2L 8167121 8167163 chr2L 8167237 8167279 21 114 12.0 6.5 9.2 2.1 158 chr2L 8167121 intron Piezo + chr2L 8167200 intron Piezo + chr2L 8167279 intron Piezo + chr2L_21_8165001 chr2L_8165001 D17-c3 239 chr2L 8244706 8244748 chr2L 8244853 8244855 33 145 5.0 10.5 7.8 3.7 149 chr2L 8244706 intron CG8086 - chr2L 8244780 intron CG8086 - chr2L 8244855 intron CG8086 - chr2L_33_8240001 chr2L_8240001 D17-c3 240 chr2L 8323674 8323731 chr2L 8323798 8323856 33 122 9.0 12.0 10.5 2.9 182 chr2L 8323674 intron CG7781 - chr2L 8323765 intron CG7781 - chr2L 8323856 intron CG7781 - chr2L_33_8320001 chr2L_8320001 D17-c3 241 chr2L 8336927 8336968 chr2L 8337026 8337072 15 104 1.0 10.5 5.8 2.2 145 chr2L 8336927 intergenic not near genes chr2L 8337000 intergenic not near genes chr2L 8337072 intergenic not near genes chr2L_15_8335001 chr2L_8335001 D17-c3 242 chr2L 1429625 1429634 chr2L 8428882 8428890 4 6999254 57.0 47.5 52.2 0.1 6999265 chr2L 1429625 intergenic CG43401 + chr2L 4929258 intron hoe1 - chr2L 8428890 intron Akap200 + chr2L_4_4925001 chr2L_4925001 D17-c3 243 chr2L 8452398 8452441 chr2L 8461594 8461637 roo 21 9195 12.0 12.0 12.0 1.6 9239 chr2L 8452398 intron fu12 - chr2L 8457018 intron fu12 - chr2L 8461637 intron fu12 - chr2L_21_8455001 chr2L_8455001 D17-c3 244 chr2L 8484387 8484437 chr2L 8484671 8484720 19 282 16.0 9.5 12.8 1.4 333 chr2L 8484387 intron d + chr2L 8484554 intron d + chr2L 8484720 intron d + chr2L_19_8480001 chr2L_8480001 D17-c3 245 chr2L 8498182 8498235 chr2L 8498288 8498341 24 106 7.5 6.5 7.0 3.0 159 chr2L 8498182 intron Dh31 - chr2L 8498262 intron Dh31 - chr2L 8498341 intron Dh31 - chr2L_24_8495001 chr2L_8495001 D17-c3 246 chr2L 8538142 8538153 chr2L 8538243 8538254 8 101 20.0 0.5 10.2 0.7 112 chr2L 8538142 intron CG17834 + chr2L 8538198 intron CG17834 + chr2L 8538254 intron CG17834 + chr2L_8_8535001 chr2L_8535001 D17-c3 247 chr2L 8553445 8553492 chr2L 8553617 8553664 37 170 8.5 14.0 11.2 3.0 219 chr2L 8553445 intron Sema-1a + chr2L 8553554 intron Sema-1a + chr2L 8553664 intron Sema-1a + chr2L_37_8550001 chr2L_8550001 D17-c3 248 chr2L 8594442 8594491 chr2L 8601521 8601570 297 12 7079 9.0 4.5 6.8 1.5 7128 chr2L 8594442 intron,3` UTR Sema-1a +,CR43855 - chr2L 8598006 intron Sema-1a + chr2L 8601570 intron Sema-1a + chr2L_12_8595001 chr2L_8595001 D17-c3 249 chr2L 8629244 8629292 chr2L 8629347 8629394 20 103 5.5 7.0 6.2 2.8 150 chr2L 8629244 intron Sema-1a + chr2L 8629319 intron Sema-1a + chr2L 8629394 intron Sema-1a + chr2L_20_8625001 chr2L_8625001 D17-c3 250 chr2L 8723091 8723144 chr2L 8731493 8731546 Tirant 35 8402 7.0 10.5 8.8 3.6 8455 chr2L 8723091 intron raw - chr2L 8727318 intron raw - chr2L 8731546 intron raw - chr2L_35_8725001 chr2L_8725001 D17-c3 251 chr2L 8736241 8736255 chr2L 8736346 8736360 6 105 0.0 3.5 1.8 2.1 119 chr2L 8736241 intron raw - chr2L 8736300 intron raw - chr2L 8736360 intron raw - chr2L_6_8735001 chr2L_8735001 D17-c3 252 chr2L 8759967 8759976 chr2L 8760133 8760142 5 166 18.0 0.0 9.0 0.5 175 chr2L 8759967 intergenic not near genes chr2L 8760054 intergenic not near genes chr2L 8760142 intergenic not near genes chr2L_5_8760001 chr2L_8760001 D17-c3 253 chr2L 8784680 8784725 chr2L 8784816 8784861 22 136 8.0 7.5 7.8 2.5 181 chr2L 8784680 intergenic not near genes chr2L 8784770 intergenic not near genes chr2L 8784861 intergenic not near genes chr2L_22_8780001 chr2L_8780001 D17-c3 254 chr2L 8786534 8786576 chr2L 8786646 8786678 17 107 4.5 12.0 8.2 1.8 144 chr2L 8786534 intergenic not near genes chr2L 8786606 intergenic not near genes chr2L 8786678 intergenic not near genes chr2L_17_8785001 chr2L_8785001 D17-c3 255 chr2L 8788727 8788787 chr2L 8788843 8788903 24 116 6.0 7.0 6.5 3.2 176 chr2L 8788727 intergenic not near genes chr2L 8788815 intergenic not near genes chr2L 8788903 intergenic not near genes chr2L_24_8785001 chr2L_8785001 D17-c3 256 chr2L 8799774 8799832 chr2L 8799915 8799958 37 131 10.5 12.0 11.2 3.0 184 chr2L 8799774 intergenic not near genes chr2L 8799866 intergenic not near genes chr2L 8799958 intergenic not near genes chr2L_37_8795001 chr2L_8795001 D17-c3 257 chr2L 8891849 8891906 chr2L 8891952 8892010 9 104 1.5 1.5 1.5 3.6 161 chr2L 8891849 exon CG42713 + chr2L 8891930 3` UTR CG42713 + chr2L 8892010 3` UTR CG42713 + chr2L_9_8890001 chr2L_8890001 D17-c3 258 chr2L 8902427 8902482 chr2L 8902599 8902654 21 171 5.5 14.5 10.0 1.9 227 chr2L 8902427 intron CG34398 + chr2L 8902540 intron CG34398 + chr2L 8902654 intron CG34398 + chr2L_21_8900001 chr2L_8900001 D17-c3 259 chr2L 8910697 8910749 chr2L 8910813 8910865 27 116 8.0 4.0 6.0 3.9 168 chr2L 8910697 intron CG34398 + chr2L 8910781 intron CG34398 + chr2L 8910865 intron CG34398 + chr2L_27_8910001 chr2L_8910001 D17-c3 260 chr2L 8946679 8946733 chr2L 8946813 8946867 25 134 13.0 10.5 11.8 2.0 188 chr2L 8946679 intron C1GalTA - chr2L 8946773 intron C1GalTA - chr2L 8946867 intron C1GalTA - chr2L_25_8945001 chr2L_8945001 D17-c3 261 chr2L 8956206 8956232 chr2L 8956308 8956334 6 102 5.5 4.0 4.8 1.0 128 chr2L 8956206 intron CG31886 - chr2L 8956270 intron CG31886 - chr2L 8956334 intron CG31886 - chr2L_6_8955001 chr2L_8955001 D17-c3 262 chr2L 8976201 8976255 chr2L 8976318 8976372 12 116 1.0 6.5 3.8 2.5 171 chr2L 8976201 intergenic not near genes chr2L 8976286 intergenic not near genes chr2L 8976372 intergenic not near genes chr2L_12_8975001 chr2L_8975001 D17-c3 263 chr2L 8980436 8980452 chr2L 8980550 8980566 8 114 11.0 0.5 5.8 1.2 130 chr2L 8980436 intron CG13101 - chr2L 8980501 intron CG13101 - chr2L 8980566 intron CG13101 - chr2L_8_8980001 chr2L_8980001 D17-c3 264 chr2L 9000259 9000307 chr2L 9007794 9007842 roo 48 7535 9.5 1.5 5.5 7.4 7583 chr2L 9000259 intergenic Try29F + chr2L 9004050 intergenic not near genes chr2L 9007842 intergenic not near genes chr2L_48_9000001 chr2L_9000001 D17-c3 265 chr2L 9007790 9007843 chr2L 9007894 9007896 5 94 0.0 0.0 0.0 5.0 106 chr2L 9007790 intergenic not near genes chr2L 9007843 intergenic not near genes chr2L 9007896 intergenic not near genes chr2L_5_9005001 chr2L_9005001 D17-c3 266 chr2L 9025793 9025850 chr2L 9025902 9025959 45 109 14.5 19.0 16.8 2.5 166 chr2L 9025793 intron,3` UTR CG9582 -,CR44352 - chr2L 9025876 intron,3` UTR CG9582 -,CR44352 - chr2L 9025959 intron,3` UTR CG9582 -,CR44352 - chr2L_45_9025001 chr2L_9025001 D17-c3 267 chr2L 9042541 9042587 chr2L 9042673 9042706 5 122 0.0 7.5 3.8 1.0 165 chr2L 9042541 intergenic not near genes chr2L 9042624 intergenic not near genes chr2L 9042706 intergenic not near genes chr2L_5_9040001 chr2L_9040001 D17-c3 268 chr2L 9053383 9053430 chr2L 9053643 9053690 27 260 9.5 0.0 4.8 4.7 307 chr2L 9053383 exon CG31708 - chr2L 9053536 intron CG31708 - chr2L 9053690 intron CG31708 - chr2L_27_9050001 chr2L_9050001 D17-c3 269 chr2L 9084336 9084340 chr2L 16217660 16217660 32 7133321 57.5 35.0 46.2 0.7 7133324 chr2L 9084336 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_32_12650001 chr2L_12650001 D17-c3 270 chr2L 9113775 9113808 chr2L 9113910 9113943 16 135 10.5 2.0 6.2 2.2 168 chr2L 9113775 intergenic Or30a + chr2L 9113859 intergenic not near genes chr2L 9113943 intergenic not near genes chr2L_16_9110001 chr2L_9110001 D17-c3 271 chr2L 9158767 9158794 chr2L 9158889 9158916 13 121 7.5 0.0 3.8 2.7 149 chr2L 9158767 intron CG32982 + chr2L 9158842 intron CG32982 + chr2L 9158916 intron CG32982 + chr2L_13_9155001 chr2L_9155001 D17-c3 272 chr2L 9217948 9217992 chr2L 9222760 9222804 Doc 34 4811 15.0 16.0 15.5 2.1 4856 chr2L 9217948 intron tai + chr2L 9220376 intron tai + chr2L 9222804 intron tai + chr2L_34_9220001 chr2L_9220001 D17-c3 273 chr2L 9217993 9217996 chr2L 9222759 9222808 Doc 4 4800 15.0 16.0 15.5 0.2 4815 chr2L 9217993 intron tai + chr2L 9220400 intron tai + chr2L 9222808 intron tai + chr2L_4_9220001 chr2L_9220001 D17-c3 274 chr2L 9225397 9225432 chr2L 9225490 9225536 14 101 9.5 12.0 10.8 1.2 139 chr2L 9225397 intron tai + chr2L 9225466 intron tai + chr2L 9225536 intron tai + chr2L_14_9225001 chr2L_9225001 D17-c3 275 chr2L 9227205 9227240 chr2L 9227315 9227342 9 107 11.0 6.5 8.8 0.9 137 chr2L 9227205 intron tai + chr2L 9227274 intron tai + chr2L 9227342 intron tai + chr2L_9_9225001 chr2L_9225001 D17-c3 276 chr2L 9251120 9251175 chr2L 9251242 9251297 27 122 9.0 12.0 10.5 2.3 177 chr2L 9251120 intergenic aust -,borr - chr2L 9251208 intergenic aust -,borr - chr2L 9251297 intergenic borr -,aust - chr2L_27_9250001 chr2L_9250001 D17-c3 277 chr2L 9262085 9262143 chr2L 9262215 9262253 37 127 15.0 10.5 12.8 2.7 168 chr2L 9262085 intron,3` UTR Ggamma30A +,CR45262 - chr2L 9262169 intron,3` UTR Ggamma30A +,CR45262 - chr2L 9262253 intron,intron Ggamma30A +,CR45262 - chr2L_37_9260001 chr2L_9260001 D17-c3 278 chr2L 9279963 9280016 chr2L 9280082 9280135 12 119 3.5 3.5 3.5 2.7 172 chr2L 9279963 intron Ggamma30A + chr2L 9280049 intron Ggamma30A + chr2L 9280135 intron Ggamma30A + chr2L_12_9280001 chr2L_9280001 D17-c3 279 chr2L 9283179 9283182 chr2L 9283281 9283284 4 102 4.0 8.5 6.2 0.6 105 chr2L 9283179 intron Ggamma30A + chr2L 9283232 intron Ggamma30A + chr2L 9283284 intron Ggamma30A + chr2L_4_9280001 chr2L_9280001 D17-c3 280 chr2L 9290747 9290799 chr2L 9290849 9290901 9 102 2.5 3.0 2.8 2.4 154 chr2L 9290747 intron Ggamma30A + chr2L 9290824 intron Ggamma30A + chr2L 9290901 intron Ggamma30A + chr2L_9_9290001 chr2L_9290001 D17-c3 281 chr2L 9297353 9297405 chr2L 9297455 9297500 45 102 7.0 13.0 10.0 4.1 147 chr2L 9297353 3` UTR Ggamma30A + chr2L 9297426 3` UTR Ggamma30A + chr2L 9297500 3` UTR Ggamma30A + chr2L_45_9295001 chr2L_9295001 D17-c3 282 chr2L 9300675 9300686 chr2L 9300785 9300796 5 110 11.5 0.0 5.8 0.7 121 chr2L 9300675 3` UTR Ggamma30A + chr2L 9300736 3` UTR Ggamma30A + chr2L 9300796 3` UTR Ggamma30A + chr2L_5_9300001 chr2L_9300001 D17-c3 283 chr2L 9367579 9367590 chr2L 9367680 9367691 4 101 9.5 22.0 15.8 0.2 112 chr2L 9367579 intergenic CG34181 + chr2L 9367635 intergenic CG34181 + chr2L 9367691 5` UTR CG34181 + chr2L_4_9365001 chr2L_9365001 D17-c3 284 chr2L 9380218 9380250 chr2L 9380338 9380370 25 120 22.5 8.5 15.5 1.5 152 chr2L 9380218 exon Shawl - chr2L 9380294 intron Shawl - chr2L 9380370 intron Shawl - chr2L_25_9380001 chr2L_9380001 D17-c3 285 chr2L 9387231 9387277 chr2L 9387354 9387400 16 123 5.0 7.0 6.0 2.3 169 chr2L 9387231 intron Shawl - chr2L 9387316 intron Shawl - chr2L 9387400 intron,5` UTR Shawl -,Aldh + chr2L_16_9385001 chr2L_9385001 D17-c3 286 chr2L 9393480 9393522 chr2L 9396472 9396513 jockey 7 2991 1.0 9.0 5.0 1.2 3033 chr2L 9393480 intron Shawl - chr2L 9394996 intron Shawl - chr2L 9396513 intron Shawl - chr2L_7_9390001 chr2L_9390001 D17-c3 287 chr2L 9396744 9396771 chr2L 9401150 9401176 8 4405 83.5 14.0 48.8 0.2 4432 chr2L 9396744 intron Shawl - chr2L 9398960 intron Shawl - chr2L 9401176 intron Shawl - chr2L_8_9395001 chr2L_9395001 D17-c3 288 chr2L 9448898 9448929 chr2L 9449010 9449041 14 112 0.0 8.5 4.2 2.7 143 chr2L 9448898 intron numb + chr2L 9448970 intron numb + chr2L 9449041 intron numb + chr2L_14_9445001 chr2L_9445001 D17-c3 289 chr2L 9454951 9455007 chr2L 9455078 9455134 45 127 9.0 5.5 7.2 5.5 183 chr2L 9454951 intron numb + chr2L 9455042 intron numb + chr2L 9455134 intron numb + chr2L_45_9455001 chr2L_9455001 D17-c3 290 chr2L 9456908 9457081 chr2L 9457014 9457183 33 103 55.5 19.0 37.2 0.9 275 chr2L 9456908 intron numb + chr2L 9457046 intron numb + chr2L 9457183 intron numb + chr2L_33_9455001 chr2L_9455001 D17-c3 291 chr2L 9474758 9474808 chr2L 9474877 9474927 16 119 4.5 5.0 4.8 2.8 169 chr2L 9474758 intergenic not near genes chr2L 9474842 intergenic not near genes chr2L 9474927 intergenic not near genes chr2L_16_9470001 chr2L_9470001 D17-c3 292 chr2L 9493226 9493229 chr2L 9493335 9493337 4 109 32.0 13.5 22.8 0.2 111 chr2L 9493226 intron Gdi - chr2L 9493282 intron Gdi - chr2L 9493337 intron Gdi - chr2L_4_9490001 chr2L_9490001 D17-c3 293 chr2L 9493230 9493276 chr2L 9493334 9493384 46 107 10.5 13.0 11.8 3.6 154 chr2L 9493230 intron Gdi - chr2L 9493307 intron Gdi - chr2L 9493384 intron Gdi - chr2L_46_9490001 chr2L_9490001 D17-c3 294 chr2L 9527298 9527311 chr2L 9527405 9527418 8 106 6.5 9.0 7.8 0.9 120 chr2L 9527298 intron Oatp30B + chr2L 9527358 intron Oatp30B + chr2L 9527418 intron Oatp30B + chr2L_8_9525001 chr2L_9525001 D17-c3 295 chr2L 9619475 9619520 chr2L 9619837 9619882 16 362 5.5 12.5 9.0 1.6 407 chr2L 9619475 intron GlcAT-S + chr2L 9619678 intron GlcAT-S + chr2L 9619882 intron GlcAT-S + chr2L_16_9615001 chr2L_9615001 D17-c3 296 chr2L 9664881 9664941 chr2L 9665001 9665061 45 120 7.0 11.0 9.0 4.5 180 chr2L 9664881 intergenic not near genes chr2L 9664971 intergenic not near genes chr2L 9665061 intergenic not near genes chr2L_45_9660001 chr2L_9660001 D17-c3 297 chr2L 9719749 9719779 chr2L 9719857 9719887 10 108 0.0 3.0 1.5 4.0 138 chr2L 9719749 intron Nckx30C - chr2L 9719818 intron Nckx30C - chr2L 9719887 intron Nckx30C - chr2L_10_9715001 chr2L_9715001 D17-c3 298 chr2L 9730951 9731006 chr2L 9731057 9731114 64 107 6.5 10.5 8.5 6.7 163 chr2L 9730951 intron Nckx30C - chr2L 9731032 intron Nckx30C - chr2L 9731114 intron Nckx30C - chr2L_64_9730001 chr2L_9730001 D17-c3 299 chr2L 9767884 9767937 chr2L 9767988 9768041 39 102 14.0 16.5 15.2 2.4 157 chr2L 9767884 intron,exon ppk18 -,CG4017 + chr2L 9767962 intron,exon ppk18 -,CG4017 + chr2L 9768041 intron,exon ppk18 -,CG4017 + chr2L_39_9765001 chr2L_9765001 D17-c3 300 chr2L 9775958 9776012 chr2L 9776065 9776119 21 107 1.5 8.0 4.8 3.6 161 chr2L 9775958 intergenic not near genes chr2L 9776038 intergenic not near genes chr2L 9776119 intergenic not near genes chr2L_21_9775001 chr2L_9775001 D17-c3 301 chr2L 9837407 9837447 chr2L 9837510 9837550 18 103 3.0 2.5 2.8 4.7 143 chr2L 9837407 intron nAChRalpha6 - chr2L 9837478 intron nAChRalpha6 - chr2L 9837550 intron nAChRalpha6 - chr2L_18_9835001 chr2L_9835001 D17-c3 302 chr2L 9862343 9862358 chr2L 9862476 9862491 7 133 0.0 23.0 11.5 0.6 148 chr2L 9862343 intron nAChRalpha6 - chr2L 9862417 intron nAChRalpha6 - chr2L 9862491 intron nAChRalpha6 - chr2L_7_9860001 chr2L_9860001 D17-c3 303 chr2L 9871518 9871554 chr2L 9871621 9871665 10 110 18.0 19.0 18.5 0.5 147 chr2L 9871518 intron nAChRalpha6 - chr2L 9871592 intron nAChRalpha6 - chr2L 9871665 intron nAChRalpha6 - chr2L_10_9870001 chr2L_9870001 D17-c3 304 chr2L 9873754 9873775 chr2L 9873875 9873881 5 114 39.0 30.5 34.8 0.1 127 chr2L 9873754 intron nAChRalpha6 - chr2L 9873818 intron nAChRalpha6 - chr2L 9873881 intron nAChRalpha6 - chr2L_5_9870001 chr2L_9870001 D17-c3 305 chr2L 9973702 9973758 chr2L 9980846 9980897 HMS-Beagle 64 7142 13.5 14.0 13.8 4.3 7195 chr2L 9973702 intergenic not near genes chr2L 9977300 intergenic not near genes chr2L 9980897 intergenic not near genes chr2L_64_9975001 chr2L_9975001 D17-c3 306 chr2L 9986331 9986346 chr2L 9986451 9986466 12 119 14.0 13.0 13.5 0.8 135 chr2L 9986331 intron bib + chr2L 9986398 intron bib + chr2L 9986466 intron bib + chr2L_12_9985001 chr2L_9985001 D17-c3 307 chr2L 9986350 9986378 chr2L 9986446 9986498 21 107 7.0 11.5 9.2 2.1 148 chr2L 9986350 intron bib + chr2L 9986424 intron bib + chr2L 9986498 intron bib + chr2L_21_9985001 chr2L_9985001 D17-c3 308 chr2L 10039084 10039127 chr2L 10039330 10039373 18 244 30.0 27.5 28.8 0.6 289 chr2L 10039084 intergenic obst-B + chr2L 10039228 intergenic obst-B + chr2L 10039373 intergenic obst-B + chr2L_18_10035001 chr2L_10035001 D17-c3 309 chr2L 10050368 10050412 chr2L 10050477 10050520 11 108 25.0 25.5 25.2 0.4 152 chr2L 10050368 exon CG33301 + chr2L 10050444 exon CG33301 + chr2L 10050520 exon CG33301 + chr2L_11_10050001 chr2L_10050001 D17-c3 310 chr2L 10051701 10051729 chr2L 10051810 10051839 9 109 13.5 11.5 12.5 0.7 138 chr2L 10051701 5` UTR CR44874 + chr2L 10051770 5` UTR CR44874 + chr2L 10051839 5` UTR CR44874 + chr2L_9_10050001 chr2L_10050001 D17-c3 311 chr2L 10051730 10051752 chr2L 10051809 10051859 16 95 7.5 11.5 9.5 1.5 129 chr2L 10051730 5` UTR CR44874 + chr2L 10051794 5` UTR CR44874 + chr2L 10051859 5` UTR CR44874 + chr2L_16_10050001 chr2L_10050001 D17-c3 312 chr2L 10138173 10138194 chr2L 10143438 10143459 Rt1c 22 5265 7.5 16.5 12.0 1.7 5286 chr2L 10138173 intron CG44153 - chr2L 10140816 intron CG44153 - chr2L 10143459 intron CG44153 - chr2L_22_10140001 chr2L_10140001 D17-c3 313 chr2L 10153182 10153232 chr2L 10153286 10153334 32 103 9.0 10.5 9.8 3.0 152 chr2L 10153182 intron,exon CG44153 -,CG4839 + chr2L 10153258 intron,intron CG44153 -,CG4839 + chr2L 10153334 intron,exon CG44153 -,CG4839 + chr2L_32_10150001 chr2L_10150001 D17-c3 314 chr2L 10156296 10156345 chr2L 10163791 10163840 blood 15 7495 8.0 5.0 6.5 2.0 7544 chr2L 10156296 intron,3` UTR CG44153 -,CG4839 + chr2L 10160068 intron CG44153 - chr2L 10163840 intron CG44153 - chr2L_15_10160001 chr2L_10160001 D17-c3 315 chr2L 10176024 10176024 chr2L 16071771 16071771 14 5895747 31.0 47.5 39.2 0.3 5895747 chr2L 10176024 intron CG44153 - chr2L 13123898 intergenic not near genes chr2L 16071771 intron beat-Ia + chr2L_14_13120001 chr2L_13120001 D17-c3 316 chr2L 10180564 10180579 chr2L 10180676 10180690 7 112 15.0 0.0 7.5 0.8 126 chr2L 10180564 intergenic CG44153 - chr2L 10180627 intergenic CG44153 - chr2L 10180690 intergenic CG44153 - chr2L_7_10180001 chr2L_10180001 D17-c3 317 chr2L 10180584 10180606 chr2L 10180671 10180700 12 90 5.0 0.0 2.5 3.4 116 chr2L 10180584 intergenic CG44153 - chr2L 10180642 intergenic CG44153 - chr2L 10180700 intergenic CG44153 - chr2L_12_10180001 chr2L_10180001 D17-c3 318 chr2L 10209829 10209844 chr2L 10209931 10209946 5 102 4.5 0.0 2.2 1.6 117 chr2L 10209829 intergenic CG5727 -,CR44845 +,CG5731 - chr2L 10209888 3` UTR CG5727 - chr2L 10209946 3` UTR CG5727 - chr2L_5_10205001 chr2L_10205001 D17-c3 319 chr2L 10258418 10258440 chr2L 10258528 10258550 6 110 10.0 16.0 13.0 0.4 132 chr2L 10258418 intron Pten - chr2L 10258484 intron Pten - chr2L 10258550 exon Pten - chr2L_6_10255001 chr2L_10255001 D17-c3 320 chr2L 10281651 10281687 chr2L 10281771 10281818 9 127 0.0 4.0 2.0 3.0 167 chr2L 10281651 intergenic CG5604 - chr2L 10281734 intergenic CG5604 - chr2L 10281818 intergenic CG5604 - chr2L_9_10280001 chr2L_10280001 D17-c3 321 chr2L 10311780 10311823 chr2L 10311883 10311926 9 102 23.0 25.5 24.2 0.4 146 chr2L 10311780 exon l(2)SH0834 - chr2L 10311853 intron l(2)SH0834 - chr2L 10311926 exon l(2)SH0834 - chr2L_9_10310001 chr2L_10310001 D17-c3 322 chr2L 10395462 10395507 chr2L 10395567 10395612 16 104 2.0 4.5 3.2 3.8 150 chr2L 10395462 intron Mdh1 - chr2L 10395537 intron Mdh1 - chr2L 10395612 intron Mdh1 - chr2L_16_10395001 chr2L_10395001 D17-c3 323 chr2L 10458080 10458101 chr2L 10458366 10458387 8 286 4.0 0.0 2.0 2.7 307 chr2L 10458080 intron LM408 + chr2L 10458234 intron LM408 + chr2L 10458387 intron LM408 + chr2L_8_10455001 chr2L_10455001 D17-c3 324 chr2L 10474360 10474413 chr2L 10474466 10474519 15 106 6.0 6.0 6.0 2.1 159 chr2L 10474360 intergenic RluA-1 - chr2L 10474440 intergenic RluA-1 - chr2L 10474519 intergenic RluA-1 - chr2L_15_10470001 chr2L_10470001 D17-c3 325 chr2L 10495281 10495308 chr2L 10495383 10495410 9 102 11.0 9.0 10.0 0.8 129 chr2L 10495281 intron Myo31DF - chr2L 10495346 intron Myo31DF - chr2L 10495410 intron Myo31DF - chr2L_9_10495001 chr2L_10495001 D17-c3 326 chr2L 10515334 10515383 chr2L 10515452 10515501 18 118 6.0 4.0 5.0 3.0 167 chr2L 10515334 intron,intron CG45083 -,Fatp - chr2L 10515418 intron,intron CG45083 -,Fatp - chr2L 10515501 intron,intron CG45083 -,Fatp - chr2L_18_10515001 chr2L_10515001 D17-c3 327 chr2L 10531587 10531625 chr2L 10531704 10531742 5 117 0.0 2.5 1.2 2.3 155 chr2L 10531587 3` UTR Lip4 + chr2L 10531664 3` UTR Lip4 + chr2L 10531742 3` UTR Lip4 + chr2L_5_10530001 chr2L_10530001 D17-c3 328 chr2L 10563887 10563946 chr2L 10564005 10564064 16 118 3.0 6.5 4.8 2.8 177 chr2L 10563887 intron Trim9 + chr2L 10563976 intron Trim9 + chr2L 10564064 intron Trim9 + chr2L_16_10560001 chr2L_10560001 D17-c3 329 chr2L 10580768 10580823 chr2L 10580874 10580929 21 102 5.5 7.5 6.5 2.8 161 chr2L 10580768 intron Trim9 + chr2L 10580848 intron Trim9 + chr2L 10580929 intron Trim9 + chr2L_21_10580001 chr2L_10580001 D17-c3 330 chr2L 10592818 10592869 chr2L 10600505 10600556 opus 21 7687 3.0 4.5 3.8 4.4 7738 chr2L 10592818 intron Trim9 + chr2L 10596687 intron Trim9 + chr2L 10600556 intron Trim9 + chr2L_21_10595001 chr2L_10595001 D17-c3 331 chr2L 10604171 10604217 chr2L 10604280 10604303 7 103 10.0 2.5 6.2 1.0 132 chr2L 10604171 intron Trim9 + chr2L 10604237 intron Trim9 + chr2L 10604303 intron Trim9 + chr2L_7_10600001 chr2L_10600001 D17-c3 332 chr2L 10640616 10640672 chr2L 10640730 10640786 29 114 8.0 5.5 6.8 3.7 170 chr2L 10640616 exon CG31872 + chr2L 10640701 exon CG31872 + chr2L 10640786 exon CG31872 + chr2L_29_10640001 chr2L_10640001 D17-c3 333 chr2L 10673715 10673764 chr2L 10673822 10673871 15 107 8.0 4.5 6.2 2.1 156 chr2L 10673715 intergenic not near genes chr2L 10673793 intergenic not near genes chr2L 10673871 intergenic not near genes chr2L_15_10670001 chr2L_10670001 D17-c3 334 chr2L 10688534 10688571 chr2L 10688635 10688672 8 101 1.0 3.5 2.2 2.5 138 chr2L 10688534 intergenic CG7294 - chr2L 10688603 intergenic CG7294 - chr2L 10688672 intergenic CG7294 - chr2L_8_10685001 chr2L_10685001 D17-c3 335 chr2L 10690400 10690434 chr2L 10690991 10691019 8 587 0.0 7.0 3.5 1.8 619 chr2L 10690400 intergenic not near genes chr2L 10690710 intergenic not near genes chr2L 10691019 intergenic not near genes chr2L_8_10690001 chr2L_10690001 D17-c3 336 chr2L 10701685 10701742 chr2L 10701790 10701847 26 104 3.5 1.5 2.5 7.4 162 chr2L 10701685 intergenic Lip1 -,Lip2 - chr2L 10701766 intergenic Lip2 -,Lip1 - chr2L 10701847 intergenic Lip2 -,Lip1 - chr2L_26_10700001 chr2L_10700001 D17-c3 337 chr2L 10787957 10788023 chr2L 10788075 10788124 10 106 0.0 4.5 2.2 3.1 167 chr2L 10787957 intron CG31869 - chr2L 10788040 intron CG31869 - chr2L 10788124 intron CG31869 - chr2L_10_10785001 chr2L_10785001 D17-c3 338 chr2L 10836734 10836775 chr2L 10836838 10836878 5 103 3.5 3.5 3.5 1.1 144 chr2L 10836734 intron Nos - chr2L 10836806 intron Nos - chr2L 10836878 intron Nos - chr2L_5_10835001 chr2L_10835001 D17-c3 339 chr2L 10852143 10852178 chr2L 10852257 10852292 10 114 10.5 10.0 10.2 0.9 149 chr2L 10852143 intron CG43129 + chr2L 10852218 intron CG43129 + chr2L 10852292 intron CG43129 + chr2L_10_10850001 chr2L_10850001 D17-c3 340 chr2L 10862843 10862876 chr2L 10864467 10864481 Rt1c 26 1627 6.5 9.0 7.8 3.0 1638 chr2L 10862843 3` UTR CR43807 - chr2L 10863662 intron CR43807 - chr2L 10864481 3` UTR CR43807 - chr2L_26_10860001 chr2L_10860001 D17-c3 341 chr2L 10930736 10930789 chr2L 10930840 10930894 13 103 1.0 8.0 4.5 2.4 158 chr2L 10930736 intron dpr2 - chr2L 10930815 intron dpr2 - chr2L 10930894 intron dpr2 - chr2L_13_10930001 chr2L_10930001 D17-c3 342 chr2L 10945064 10945104 chr2L 10945166 10945200 33 97 11.0 10.5 10.8 2.8 136 chr2L 10945064 intron dpr2 - chr2L 10945132 intron dpr2 - chr2L 10945200 intron dpr2 - chr2L_33_10945001 chr2L_10945001 D17-c3 343 chr2L 10946938 10946975 chr2L 10956168 10956215 roo 25 9237 11.5 17.5 14.5 1.6 9277 chr2L 10946938 intron dpr2 - chr2L 10951576 intron dpr2 - chr2L 10956215 intron dpr2 - chr2L_25_10950001 chr2L_10950001 D17-c3 344 chr2L 11167453 11167510 chr2L 11167569 11167626 22 109 8.5 7.5 8.0 2.4 173 chr2L 11167453 intron Ca-beta - chr2L 11167540 intron Ca-beta - chr2L 11167626 intron Ca-beta - chr2L_22_11165001 chr2L_11165001 D17-c3 345 chr2L 11174616 11174658 chr2L 11174721 11174728 12 96 8.0 11.5 9.8 1.1 112 chr2L 11174616 intron Ca-beta - chr2L 11174672 intron Ca-beta - chr2L 11174728 intron Ca-beta - chr2L_12_11170001 chr2L_11170001 D17-c3 346 chr2L 11194177 11194195 chr2L 11194295 11194308 10 118 20.5 33.0 26.8 0.4 131 chr2L 11194177 intron Ca-beta - chr2L 11194242 intron Ca-beta - chr2L 11194308 intron Ca-beta - chr2L_10_11190001 chr2L_11190001 D17-c3 347 chr2L 11224032 11224087 chr2L 11224168 11224223 27 135 6.5 5.5 6.0 3.9 191 chr2L 11224032 intron ab + chr2L 11224128 intron ab + chr2L 11224223 intron ab + chr2L_27_11220001 chr2L_11220001 D17-c3 348 chr2L 11228180 11228206 chr2L 11228282 11228297 16 100 15.0 17.5 16.2 0.9 117 chr2L 11228180 intron ab + chr2L 11228238 intron ab + chr2L 11228297 intron ab + chr2L_16_11225001 chr2L_11225001 D17-c3 349 chr2L 11248544 11248596 chr2L 11248652 11248699 19 105 6.5 12.5 9.5 1.8 155 chr2L 11248544 intron ab + chr2L 11248622 intron ab + chr2L 11248699 intron ab + chr2L_19_11245001 chr2L_11245001 D17-c3 350 chr2L 11295986 11296017 chr2L 11296202 11296233 13 216 14.0 0.5 7.2 1.6 247 chr2L 11295986 intergenic not near genes chr2L 11296110 intergenic not near genes chr2L 11296233 intergenic not near genes chr2L_13_11295001 chr2L_11295001 D17-c3 351 chr2L 11315248 11315271 chr2L 11317672 11317700 G2 10 2428 6.0 3.5 4.8 1.7 2452 chr2L 11315248 intergenic not near genes chr2L 11316474 intergenic not near genes chr2L 11317700 intergenic not near genes chr2L_10_11315001 chr2L_11315001 D17-c3 352 chr2L 11363096 11363115 chr2L 11363209 11363230 7 112 7.0 12.5 9.8 0.6 134 chr2L 11363096 intron salr + chr2L 11363163 intron salr + chr2L 11363230 intron salr + chr2L_7_11360001 chr2L_11360001 D17-c3 353 chr2L 11378571 11378611 chr2L 11378675 11378711 21 116 7.5 7.0 7.2 2.6 140 chr2L 11378571 intergenic not near genes chr2L 11378641 intergenic not near genes chr2L 11378711 intergenic not near genes chr2L_21_11375001 chr2L_11375001 D17-c3 354 chr2L 11379926 11379977 chr2L 11380033 11380084 4 107 7.0 0.0 3.5 0.9 158 chr2L 11379926 intergenic not near genes chr2L 11380005 intergenic not near genes chr2L 11380084 intergenic not near genes chr2L_4_11380001 chr2L_11380001 D17-c3 355 chr2L 11380587 11380860 chr2L 11380689 11380988 26 110 0.5 3.0 1.8 9.3 401 chr2L 11380587 intergenic not near genes chr2L 11380788 intergenic not near genes chr2L 11380988 intergenic not near genes chr2L_26_11380001 chr2L_11380001 D17-c3 356 chr2L 11380863 11380877 chr2L 11380991 11381005 10 128 0.5 11.5 6.0 1.4 142 chr2L 11380863 intergenic not near genes chr2L 11380934 intergenic not near genes chr2L 11381005 intergenic not near genes chr2L_10_11380001 chr2L_11380001 D17-c3 357 chr2L 11399517 11399535 chr2L 11399619 11399637 5 102 9.0 0.0 4.5 0.9 120 chr2L 11399517 intergenic not near genes chr2L 11399577 intergenic not near genes chr2L 11399637 intergenic not near genes chr2L_5_11395001 chr2L_11395001 D17-c3 358 chr2L 11450109 11450154 chr2L 11450220 11450261 14 107 0.0 4.5 2.2 4.4 152 chr2L 11450109 intergenic not near genes chr2L 11450185 intergenic not near genes chr2L 11450261 intergenic not near genes chr2L_14_11450001 chr2L_11450001 D17-c3 359 chr2L 11458931 11458970 chr2L 11459072 11459111 7 141 5.5 2.0 3.8 1.5 180 chr2L 11458931 intergenic not near genes chr2L 11459021 intergenic not near genes chr2L 11459111 intergenic not near genes chr2L_7_11455001 chr2L_11455001 D17-c3 360 chr2L 11476243 11476289 chr2L 11476348 11476394 14 104 0.0 11.5 5.8 2.1 151 chr2L 11476243 intergenic not near genes chr2L 11476318 intergenic not near genes chr2L 11476394 intergenic not near genes chr2L_14_11475001 chr2L_11475001 D17-c3 361 chr2L 11491114 11491125 chr2L 11491220 11491231 6 105 15.5 11.0 13.2 0.4 117 chr2L 11491114 intergenic not near genes chr2L 11491172 intergenic not near genes chr2L 11491231 intergenic not near genes chr2L_6_11490001 chr2L_11490001 D17-c3 362 chr2L 11491131 11491159 chr2L 11491207 11491255 6 97 9.5 10.5 10.0 0.5 124 chr2L 11491131 intergenic not near genes chr2L 11491193 intergenic not near genes chr2L 11491255 intergenic not near genes chr2L_6_11490001 chr2L_11490001 D17-c3 363 chr2L 11537188 11537207 chr2L 11537289 11537290 4 94 4.0 21.0 12.5 0.3 102 chr2L 11537188 intergenic CG43438 + chr2L 11537239 intergenic CG43438 + chr2L 11537290 intergenic CG43438 + chr2L_4_11535001 chr2L_11535001 D17-c3 364 chr2L 11537735 11537782 chr2L 11537877 11537924 18 142 7.0 3.5 5.2 2.9 189 chr2L 11537735 intergenic not near genes chr2L 11537830 intergenic not near genes chr2L 11537924 intergenic not near genes chr2L_18_11535001 chr2L_11535001 D17-c3 365 chr2L 11540568 11540614 chr2L 11547995 11548041 Tabor 14 7426 1.5 4.5 3.0 3.5 7473 chr2L 11540568 intergenic not near genes chr2L 11544304 intergenic not near genes chr2L 11548041 intergenic not near genes chr2L_14_11540001 chr2L_11540001 D17-c3 366 chr2L 11555412 11555428 chr2L 11555556 11555572 4 144 3.5 1.0 2.2 1.2 160 chr2L 11555412 intergenic not near genes chr2L 11555492 intergenic not near genes chr2L 11555572 intergenic not near genes chr2L_4_11555001 chr2L_11555001 D17-c3 367 chr2L 11563615 11563660 chr2L 11568844 11568889 copia 15 5229 7.5 7.0 7.2 1.8 5274 chr2L 11563615 intergenic not near genes chr2L 11566252 intergenic not near genes chr2L 11568889 intergenic not near genes chr2L_15_11565001 chr2L_11565001 D17-c3 368 chr2L 11614047 11614086 chr2L 11615547 11615606 hopper2 12 1507 4.5 2.5 3.5 2.7 1559 chr2L 11614047 intron kek2 + chr2L 11614826 intron kek2 + chr2L 11615606 intron kek2 + chr2L_12_11610001 chr2L_11610001 D17-c3 369 chr2L 11657947 11658005 chr2L 11658057 11658115 26 108 3.5 6.0 4.8 4.5 168 chr2L 11657947 3` UTR CG43167 + chr2L 11658031 intergenic CG43167 + chr2L 11658115 intergenic CG43167 + chr2L_26_11655001 chr2L_11655001 D17-c3 370 chr2L 11672117 11672158 chr2L 11672249 11672289 11 132 1.0 3.0 2.0 3.7 172 chr2L 11672117 intergenic not near genes chr2L 11672203 intergenic not near genes chr2L 11672289 intergenic not near genes chr2L_11_11670001 chr2L_11670001 D17-c3 371 chr2L 11684530 11684586 chr2L 11684631 11684632 16 95 12.5 15.0 13.8 1.1 102 chr2L 11684530 intergenic not near genes chr2L 11684581 intergenic not near genes chr2L 11684632 intergenic not near genes chr2L_16_11680001 chr2L_11680001 D17-c3 372 chr2L 11710138 11710148 chr2L 11710239 11710248 6 101 6.0 0.0 3.0 1.5 110 chr2L 11710138 intergenic not near genes chr2L 11710193 intergenic not near genes chr2L 11710248 intergenic not near genes chr2L_6_11710001 chr2L_11710001 D17-c3 373 chr2L 11713482 11713537 chr2L 11720975 11721030 blood 15 7493 7.5 5.5 6.5 2.0 7548 chr2L 11713482 intergenic not near genes chr2L 11717256 intergenic not near genes chr2L 11721030 intergenic CR44143 + chr2L_15_11715001 chr2L_11715001 D17-c3 374 chr2L 11750300 11750342 chr2L 11750611 11750648 28 311 8.5 5.5 7.0 3.5 348 chr2L 11750300 intergenic not near genes chr2L 11750474 intergenic not near genes chr2L 11750648 intergenic not near genes chr2L_28_11750001 chr2L_11750001 D17-c3 375 chr2L 11781010 11781188 chr2L 11781119 11781289 7 105 1.0 1.5 1.2 3.2 279 chr2L 11781010 intergenic not near genes chr2L 11781150 intergenic not near genes chr2L 11781289 intergenic not near genes chr2L_7_11780001 chr2L_11780001 D17-c3 376 chr2L 11820404 11820464 chr2L 11820514 11820570 18 107 2.0 6.0 4.0 3.6 166 chr2L 11820404 intron Pde1c - chr2L 11820487 intron Pde1c - chr2L 11820570 intron Pde1c - chr2L_18_11820001 chr2L_11820001 D17-c3 377 chr2L 11825689 11825692 chr2L 11825793 11825796 4 104 15.5 0.0 7.8 0.5 107 chr2L 11825689 intron Pde1c - chr2L 11825742 intron Pde1c - chr2L 11825796 intron Pde1c - chr2L_4_11825001 chr2L_11825001 D17-c3 378 chr2L 11838277 11838318 chr2L 11838365 11838427 10 105 8.0 2.0 5.0 1.7 150 chr2L 11838277 intron Pde1c - chr2L 11838352 intron Pde1c - chr2L 11838427 intron Pde1c - chr2L_10_11835001 chr2L_11835001 D17-c3 379 chr2L 11841328 11841370 chr2L 11841450 11841502 9 125 1.5 0.0 0.8 5.0 174 chr2L 11841328 intron Pde1c - chr2L 11841415 intron Pde1c - chr2L 11841502 intron Pde1c - chr2L_9_11840001 chr2L_11840001 D17-c3 380 chr2L 11844167 11844209 chr2L 11844274 11844316 13 106 4.0 8.5 6.2 1.8 149 chr2L 11844167 intron Pde1c - chr2L 11844242 intron Pde1c - chr2L 11844316 intron Pde1c - chr2L_13_11840001 chr2L_11840001 D17-c3 381 chr2L 11892520 11892811 chr2L 11892634 11892883 40 112 10.5 5.5 8.0 4.4 363 chr2L 11892520 intron Pde1c - chr2L 11892702 intron Pde1c - chr2L 11892883 intron Pde1c - chr2L_40_11890001 chr2L_11890001 D17-c3 382 chr2L 11913269 11913312 chr2L 11913395 11913438 21 126 9.5 4.0 6.8 2.7 169 chr2L 11913269 intron Pde1c - chr2L 11913354 intron Pde1c - chr2L 11913438 intron Pde1c - chr2L_21_11910001 chr2L_11910001 D17-c3 383 chr2L 11976066 11976118 chr2L 11976168 11976220 18 102 7.5 3.0 5.2 2.9 154 chr2L 11976066 intergenic not near genes chr2L 11976143 intergenic not near genes chr2L 11976220 intergenic not near genes chr2L_18_11975001 chr2L_11975001 D17-c3 384 chr2L 12012543 12012543 chr2L 12012648 12012679 9 113 84.5 62.5 73.5 0.1 136 chr2L 12012543 intergenic not near genes chr2L 12012611 intergenic not near genes chr2L 12012679 intergenic not near genes chr2L_9_12010001 chr2L_12010001 D17-c3 385 chr2L 12067307 12067360 chr2L 12074384 12074427 297 7 7069 4.5 1.0 2.8 1.8 7120 chr2L 12067307 intergenic not near genes chr2L 12070867 intergenic not near genes chr2L 12074427 intergenic not near genes chr2L_7_12070001 chr2L_12070001 D17-c3 386 chr2L 12153997 12154052 chr2L 12154497 12154552 22 500 6.0 6.5 6.2 3.1 555 chr2L 12153997 intron CG31760 + chr2L 12154274 intron CG31760 + chr2L 12154552 intron CG31760 + chr2L_22_12150001 chr2L_12150001 D17-c3 387 chr2L 12192333 12192365 chr2L 12192483 12192515 8 150 9.5 5.0 7.2 1.0 182 chr2L 12192333 intron aret + chr2L 12192424 intron aret + chr2L 12192515 intron aret + chr2L_8_12190001 chr2L_12190001 D17-c3 388 chr2L 12210023 12210044 chr2L 12210137 12210158 13 113 7.5 5.5 6.5 1.7 135 chr2L 12210023 intron aret + chr2L 12210090 intron aret + chr2L 12210158 intron aret + chr2L_13_12210001 chr2L_12210001 D17-c3 389 chr2L 12234015 12234064 chr2L 12234135 12234184 21 120 4.5 7.5 6.0 3.0 169 chr2L 12234015 intron aret + chr2L 12234100 intron aret + chr2L 12234184 intron aret + chr2L_21_12230001 chr2L_12230001 D17-c3 390 chr2L 12315632 12315687 chr2L 12316121 12316176 6 490 4.0 3.0 3.5 1.3 544 chr2L 12315632 intergenic CR45282 - chr2L 12315904 3` UTR CR45282 - chr2L 12316176 intergenic CR45282 -,CR45283 - chr2L_6_12315001 chr2L_12315001 D17-c3 391 chr2L 12322741 12322801 chr2L 12322842 12322902 26 101 5.0 5.0 5.0 4.3 161 chr2L 12322741 intergenic not near genes chr2L 12322822 intergenic not near genes chr2L 12322902 intergenic not near genes chr2L_26_12320001 chr2L_12320001 D17-c3 392 chr2L 12345382 12345405 chr2L 12345485 12345508 15 102 16.0 7.0 11.5 1.2 126 chr2L 12345382 intron bru-2 + chr2L 12345445 intron bru-2 + chr2L 12345508 intron bru-2 + chr2L_15_12345001 chr2L_12345001 D17-c3 393 chr2L 12361008 12361041 chr2L 12361186 12361218 11 178 9.0 2.0 5.5 1.7 210 chr2L 12361008 intron bru-2 + chr2L 12361113 intron bru-2 + chr2L 12361218 intron bru-2 + chr2L_11_12360001 chr2L_12360001 D17-c3 394 chr2L 12418400 12418439 chr2L 12418508 12418547 15 107 3.5 4.0 3.8 3.1 147 chr2L 12418400 intron vir-1 - chr2L 12418474 intron vir-1 - chr2L 12418547 intron vir-1 - chr2L_15_12415001 chr2L_12415001 D17-c3 395 chr2L 12426113 12426155 chr2L 12426216 12426263 22 108 12.0 11.0 11.5 1.8 150 chr2L 12426113 exon CG6405 + chr2L 12426188 exon CG6405 + chr2L 12426263 exon CG6405 + chr2L_22_12425001 chr2L_12425001 D17-c3 396 chr2L 12487865 12487918 chr2L 12487971 12488024 35 104 10.5 7.5 9.0 3.5 159 chr2L 12487865 intron bun - chr2L 12487944 intron bun - chr2L 12488024 intron bun - chr2L_35_12485001 chr2L_12485001 D17-c3 397 chr2L 12529207 12529259 chr2L 12529384 12529436 22 177 5.0 8.0 6.5 2.9 229 chr2L 12529207 intron bun - chr2L 12529322 intron bun - chr2L 12529436 intron bun - chr2L_22_12525001 chr2L_12525001 D17-c3 398 chr2L 12558295 12558350 chr2L 12565449 12565504 HMS-Beagle 11 7154 3.5 3.5 3.5 2.4 7209 chr2L 12558295 intergenic not near genes chr2L 12561900 intergenic not near genes chr2L 12565504 intergenic not near genes chr2L_11_12560001 chr2L_12560001 D17-c3 399 chr2L 12653761 12653809 chr2L 12653903 12653950 30 141 3.0 9.0 6.0 4.3 189 chr2L 12653761 intergenic not near genes chr2L 12653856 intergenic not near genes chr2L 12653950 intergenic not near genes chr2L_30_12650001 chr2L_12650001 D17-c3 400 chr2L 12728897 12728949 chr2L 12729161 12729213 pogo 32 264 8.5 9.5 9.0 3.2 316 chr2L 12728897 intron MRP + chr2L 12729055 intron MRP + chr2L 12729213 exon MRP + chr2L_32_12725001 chr2L_12725001 D17-c3 401 chr2L 12731034 12731084 chr2L 12735826 12735876 F-element 29 4791 11.5 9.5 10.5 2.5 4842 chr2L 12731034 intron MRP + chr2L 12733455 intron MRP + chr2L 12735876 intron MRP + chr2L_29_12730001 chr2L_12730001 D17-c3 402 chr2L 12739153 12739199 chr2L 12743959 12744005 Doc 33 4806 13.5 16.0 14.8 2.1 4852 chr2L 12739153 exon MRP + chr2L 12741579 intron MRP + chr2L 12744005 exon MRP + chr2L_33_12740001 chr2L_12740001 D17-c3 403 chr2L 12751285 12751341 chr2L 12751393 12751449 20 108 8.0 4.5 6.2 2.8 164 chr2L 12751285 intergenic not near genes chr2L 12751367 intergenic not near genes chr2L 12751449 intergenic not near genes chr2L_20_12750001 chr2L_12750001 D17-c3 404 chr2L 12763803 12763870 chr2L 12764040 12764095 BS 6 231 0.0 0.0 0.0 6.0 292 chr2L 12763803 intergenic not near genes chr2L 12763949 intergenic not near genes chr2L 12764095 intergenic not near genes chr2L_6_12760001 chr2L_12760001 D17-c3 405 chr2L 12766734 12766773 chr2L 12766837 12766876 14 103 8.0 3.5 5.8 2.1 142 chr2L 12766734 intergenic not near genes chr2L 12766805 intergenic not near genes chr2L 12766876 intergenic not near genes chr2L_14_12765001 chr2L_12765001 D17-c3 406 chr2L 12781785 12781814 chr2L 12789250 12789289 Quasimodo 15 7474 22.5 6.0 14.2 1.0 7504 chr2L 12781785 intergenic not near genes chr2L 12785537 intergenic not near genes chr2L 12789289 intergenic not near genes chr2L_15_12785001 chr2L_12785001 D17-c3 407 chr2L 12791582 12791627 chr2L 12795282 12795327 F-element 14 3693 3.5 6.5 5.0 2.3 3745 chr2L 12791582 intergenic not near genes chr2L 12793454 intergenic not near genes chr2L 12795327 intergenic not near genes chr2L_14_12790001 chr2L_12790001 D17-c3 408 chr2L 12811469 12811474 chr2L 12811580 12811598 4 119 0.5 16.5 8.5 0.4 129 chr2L 12811469 intergenic not near genes chr2L 12811534 intergenic not near genes chr2L 12811598 intergenic not near genes chr2L_4_12810001 chr2L_12810001 D17-c3 409 chr2L 12811959 12812013 chr2L 12812092 12812146 30 132 13.5 8.5 11.0 2.5 187 chr2L 12811959 intergenic not near genes chr2L 12812052 intergenic not near genes chr2L 12812146 intergenic not near genes chr2L_30_12810001 chr2L_12810001 D17-c3 410 chr2L 12846859 12846907 chr2L 12846983 12847031 30 124 5.5 15.5 10.5 2.6 172 chr2L 12846859 intergenic not near genes chr2L 12846945 intergenic not near genes chr2L 12847031 intergenic not near genes chr2L_30_12845001 chr2L_12845001 D17-c3 411 chr2L 12861671 12861727 chr2L 12863163 12863197 hobo 25 1488 9.0 10.0 9.5 2.4 1526 chr2L 12861671 intergenic not near genes chr2L 12862434 intergenic not near genes chr2L 12863197 intergenic not near genes chr2L_25_12860001 chr2L_12860001 D17-c3 412 chr2L 12889005 12889064 chr2L 12889113 12889172 36 108 4.0 6.0 5.0 6.0 167 chr2L 12889005 intergenic not near genes chr2L 12889088 intergenic not near genes chr2L 12889172 intergenic not near genes chr2L_36_12885001 chr2L_12885001 D17-c3 413 chr2L 12894013 12894033 chr2L 12895495 12895525 hobo 13 1488 26.5 20.5 23.5 0.5 1512 chr2L 12894013 intergenic not near genes chr2L 12894769 intergenic not near genes chr2L 12895525 intergenic not near genes chr2L_13_12890001 chr2L_12890001 D17-c3 414 chr2L 12894035 12894036 chr2L 12895492 12895528 hobo 4 1476 24.5 20.0 22.2 0.2 1493 chr2L 12894035 intergenic not near genes chr2L 12894782 intergenic not near genes chr2L 12895528 intergenic not near genes chr2L_4_12890001 chr2L_12890001 D17-c3 415 chr2L 12894038 12894049 chr2L 12895483 12895541 hobo 14 1481 17.5 17.0 17.2 0.8 1503 chr2L 12894038 intergenic not near genes chr2L 12894790 intergenic not near genes chr2L 12895541 intergenic not near genes chr2L_14_12890001 chr2L_12890001 D17-c3 416 chr2L 12905452 12905496 chr2L 12905561 12905605 15 109 8.0 8.0 8.0 1.7 153 chr2L 12905452 intergenic not near genes chr2L 12905528 intergenic not near genes chr2L 12905605 intergenic not near genes chr2L_15_12905001 chr2L_12905001 D17-c3 417 chr2L 12933835 12933880 chr2L 12941327 12941372 blood 29 7490 10.0 16.5 13.2 2.0 7537 chr2L 12933835 intergenic not near genes chr2L 12937604 intergenic not near genes chr2L 12941372 intergenic not near genes chr2L_29_12935001 chr2L_12935001 D17-c3 418 chr2L 12949227 12949283 chr2L 12949345 12949401 16 118 22.0 12.0 17.0 0.9 174 chr2L 12949227 intergenic not near genes chr2L 12949314 intergenic not near genes chr2L 12949401 intergenic not near genes chr2L_16_12945001 chr2L_12945001 D17-c3 419 chr2L 12955854 12955904 chr2L 12956079 12956129 28 220 5.0 10.5 7.8 3.2 275 chr2L 12955854 intergenic not near genes chr2L 12955992 intergenic not near genes chr2L 12956129 intergenic not near genes chr2L_28_12955001 chr2L_12955001 D17-c3 420 chr2L 13040223 13040245 chr2L 13040319 13040347 9 101 9.0 27.5 18.2 0.5 124 chr2L 13040223 intron CG9932 - chr2L 13040285 intron CG9932 - chr2L 13040347 intron CG9932 - chr2L_9_13040001 chr2L_13040001 D17-c3 421 chr2L 13043386 13043415 chr2L 13043490 13043518 5 103 22.5 21.0 21.8 0.2 132 chr2L 13043386 intron CG9932 - chr2L 13043452 intron CG9932 - chr2L 13043518 intron CG9932 - chr2L_5_13040001 chr2L_13040001 D17-c3 422 chr2L 13069246 13069297 chr2L 13069392 13069443 15 146 21.0 18.5 19.8 0.7 197 chr2L 13069246 intergenic not near genes chr2L 13069344 intergenic not near genes chr2L 13069443 intergenic not near genes chr2L_15_13065001 chr2L_13065001 D17-c3 423 chr2L 13109436 13109471 chr2L 13109588 13109624 9 152 21.0 18.0 19.5 0.4 188 chr2L 13109436 3` UTR CG5142 + chr2L 13109530 intergenic CG5142 + chr2L 13109624 intergenic CG5142 + chr2L_9_13105001 chr2L_13105001 D17-c3 424 chr2L 13152212 13152241 chr2L 13152315 13152344 12 103 33.0 31.5 32.2 0.4 132 chr2L 13152212 intergenic not near genes chr2L 13152278 intergenic not near genes chr2L 13152344 intergenic not near genes chr2L_12_13150001 chr2L_13150001 D17-c3 425 chr2L 13154096 13154122 chr2L 13154199 13154225 11 103 6.0 0.0 3.0 2.8 129 chr2L 13154096 intergenic not near genes chr2L 13154160 intergenic not near genes chr2L 13154225 intergenic not near genes chr2L_11_13150001 chr2L_13150001 D17-c3 426 chr2L 13266357 13266409 chr2L 13266470 13266522 16 113 29.0 33.0 31.0 0.5 165 chr2L 13266357 intron CG44085 + chr2L 13266440 intron CG44085 + chr2L 13266522 intron CG44085 + chr2L_16_13265001 chr2L_13265001 D17-c3 427 chr2L 13351794 13351842 chr2L 13351905 13351945 12 110 32.0 38.5 35.2 0.3 151 chr2L 13351794 exon CG9395 - chr2L 13351870 intron CG9395 - chr2L 13351945 exon CG9395 - chr2L_12_13350001 chr2L_13350001 D17-c3 428 chr2L 13358236 13358261 chr2L 13358344 13358369 9 107 24.0 26.5 25.2 0.3 133 chr2L 13358236 intergenic not near genes chr2L 13358302 intergenic not near genes chr2L 13358369 intergenic not near genes chr2L_9_13355001 chr2L_13355001 D17-c3 429 chr2L 13374300 13374355 chr2L 13374412 13374467 18 110 43.0 42.5 42.8 0.4 167 chr2L 13374300 5` UTR CG6565 + chr2L 13374384 5` UTR CG6565 + chr2L 13374467 5` UTR CG6565 + chr2L_18_13370001 chr2L_13370001 D17-c3 430 chr2L 13405626 13405679 chr2L 13410448 13410501 Doc 35 4822 9.5 12.0 10.8 3.0 4875 chr2L 13405626 exon CG7110 + chr2L 13408064 intron CG7110 + chr2L 13410501 intron CG7110 + chr2L_35_13405001 chr2L_13405001 D17-c3 431 chr2L 13422422 13422501 chr2L 13422548 13422605 10 106 13.0 14.5 13.8 0.7 183 chr2L 13422422 intron CG42784 + chr2L 13422514 intron CG42784 + chr2L 13422605 intron CG42784 + chr2L_10_13420001 chr2L_13420001 D17-c3 432 chr2L 13449446 13449490 chr2L 13456907 13456951 Quasimodo 18 7461 5.5 13.5 9.5 1.7 7505 chr2L 13449446 intron,5` UTR CG42784 +,Hsp60D - chr2L 13453198 intron CG42784 + chr2L 13456951 intron CG42784 + chr2L_18_13450001 chr2L_13450001 D17-c3 433 chr2L 13481432 13481469 chr2L 13482064 13482086 jockey 30 631 19.5 23.5 21.5 1.3 654 chr2L 13481432 intron CG42784 + chr2L 13481759 intron CG42784 + chr2L 13482086 intron CG42784 + chr2L_30_13480001 chr2L_13480001 D17-c3 434 chr2L 13493700 13493742 chr2L 13493807 13493849 6 107 26.0 23.0 24.5 0.2 149 chr2L 13493700 intron CG42784 + chr2L 13493774 intron CG42784 + chr2L 13493849 intron CG42784 + chr2L_6_13490001 chr2L_13490001 D17-c3 435 chr2L 13522259 13522287 chr2L 13527590 13527618 Transpac 14 5330 2.0 6.0 4.0 2.8 5359 chr2L 13522259 intron B4 - chr2L 13524938 intron B4 - chr2L 13527618 intron B4 - chr2L_14_13520001 chr2L_13520001 D17-c3 436 chr2L 13543942 13543966 chr2L 13544045 13544069 8 102 13.0 19.5 16.2 0.5 127 chr2L 13543942 intron B4 - chr2L 13544006 intron B4 - chr2L 13544069 intron B4 - chr2L_8_13540001 chr2L_13540001 D17-c3 437 chr2L 13690704 13690756 chr2L 13693110 13693162 25 2406 26.0 43.0 34.5 0.7 2458 chr2L 13690704 intron CG31814 - chr2L 13691933 intron CG31814 - chr2L 13693162 intron CG31814 - chr2L_25_13690001 chr2L_13690001 D17-c3 438 chr2L 13690525 13690577 chr2L 13693965 13694006 7 3431 48.0 9.5 28.8 0.2 3481 chr2L 13690525 exon CG31814 - chr2L 13692266 intron CG31814 - chr2L 13694006 intron CG31814 - chr2L_7_13690001 chr2L_13690001 D17-c3 439 chr2L 13713536 13713562 chr2L 13713637 13713663 6 101 6.5 7.0 6.8 0.8 127 chr2L 13713536 intron CG31814 - chr2L 13713600 intron CG31814 - chr2L 13713663 intron CG31814 - chr2L_6_13710001 chr2L_13710001 D17-c3 440 chr2L 13720212 13720239 chr2L 13720325 13720352 9 113 27.0 12.5 19.8 0.4 140 chr2L 13720212 intergenic not near genes chr2L 13720282 intergenic not near genes chr2L 13720352 intergenic not near genes chr2L_9_13720001 chr2L_13720001 D17-c3 441 chr2L 13733755 13733777 chr2L 13733899 13733921 4 144 18.0 21.0 19.5 0.2 166 chr2L 13733755 intergenic not near genes chr2L 13733838 intergenic not near genes chr2L 13733921 intergenic not near genes chr2L_4_13730001 chr2L_13730001 D17-c3 442 chr2L 13749189 13749210 chr2L 13749297 13749318 10 108 0.5 2.5 1.5 4.0 129 chr2L 13749189 intron,intron CR44846 +,TM9SF4 + chr2L 13749254 intron,intron CR44846 +,TM9SF4 + chr2L 13749318 intron,intron CR44846 +,TM9SF4 + chr2L_10_13745001 chr2L_13745001 D17-c3 443 chr2L 13761783 13761835 chr2L 13762919 13762971 Doc 14 1136 10.0 7.0 8.5 1.5 1188 chr2L 13761783 intron TM9SF4 + chr2L 13762377 intron TM9SF4 + chr2L 13762971 intron TM9SF4 + chr2L_14_13760001 chr2L_13760001 D17-c3 444 chr2L 13800173 13800203 chr2L 13800292 13800332 7 128 10.0 15.0 12.5 0.5 159 chr2L 13800173 intergenic Sec71 + chr2L 13800252 intergenic not near genes chr2L 13800332 intergenic not near genes chr2L_7_13800001 chr2L_13800001 D17-c3 445 chr2L 13842109 13842164 chr2L 13842218 13842273 8 109 23.0 16.0 19.5 0.4 164 chr2L 13842109 intron CenG1A + chr2L 13842191 intron CenG1A + chr2L 13842273 intron CenG1A + chr2L_8_13840001 chr2L_13840001 D17-c3 446 chr2L 13853067 13853110 chr2L 13862242 13862285 roo 25 9175 9.5 5.0 7.2 3.0 9218 chr2L 13853067 intron CenG1A + chr2L 13857676 intron CenG1A + chr2L 13862285 intron CenG1A + chr2L_25_13855001 chr2L_13855001 D17-c3 447 chr2L 13944407 13944432 chr2L 13944552 13944577 6 145 14.5 13.5 14.0 0.4 170 chr2L 13944407 intron Ance-3 + chr2L 13944492 intron Ance-3 + chr2L 13944577 intron Ance-3 + chr2L_6_13940001 chr2L_13940001 D17-c3 448 chr2L 13952127 13952146 chr2L 13952234 13952253 11 107 17.0 11.0 14.0 0.7 126 chr2L 13952127 intron Ance-3 + chr2L 13952190 intron Ance-3 + chr2L 13952253 intron Ance-3 + chr2L_11_13950001 chr2L_13950001 D17-c3 449 chr2L 13974743 13974795 chr2L 13975171 13975223 43 426 37.0 40.5 38.8 1.1 480 chr2L 13974743 exon NimC1 - chr2L 13974983 exon NimC1 - chr2L 13975223 exon NimC1 - chr2L_43_13970001 chr2L_13970001 D17-c3 450 chr2L 13981499 13981548 chr2L 13981615 13981664 21 116 14.0 16.0 15.0 1.3 165 chr2L 13981499 exon NimC2 + chr2L 13981582 intron NimC2 + chr2L 13981664 intron NimC2 + chr2L_21_13980001 chr2L_13980001 D17-c3 451 chr2L 13988258 13988300 chr2L 13988370 13988412 8 112 18.5 24.0 21.2 0.4 154 chr2L 13988258 intron rk - chr2L 13988335 intron rk - chr2L 13988412 intron rk - chr2L_8_13985001 chr2L_13985001 D17-c3 452 chr2L 14000059 14000096 chr2L 14000163 14000200 9 105 23.5 14.5 19.0 0.5 141 chr2L 14000059 intron rk - chr2L 14000130 intron rk - chr2L 14000200 intron rk - chr2L_9_14000001 chr2L_14000001 D17-c3 453 chr2L 14010398 14010422 chr2L 14010499 14010523 8 101 23.0 20.0 21.5 0.4 125 chr2L 14010398 intergenic not near genes chr2L 14010460 intergenic not near genes chr2L 14010523 intergenic not near genes chr2L_8_14010001 chr2L_14010001 D17-c3 454 chr2L 14017739 14017749 chr2L 14017856 14017866 4 117 29.5 26.5 28.0 0.1 127 chr2L 14017739 intron bgm + chr2L 14017802 intron bgm + chr2L 14017866 intron bgm + chr2L_4_14015001 chr2L_14015001 D17-c3 455 chr2L 14112723 14112742 chr2L 14112839 14112858 4 116 13.5 9.0 11.2 0.3 135 chr2L 14112723 intergenic not near genes chr2L 14112790 intergenic not near genes chr2L 14112858 intergenic not near genes chr2L_4_14110001 chr2L_14110001 D17-c3 456 chr2L 14125954 14125995 chr2L 14126047 14126103 10 106 31.5 29.5 30.5 0.3 149 chr2L 14125954 intergenic not near genes chr2L 14126028 intergenic not near genes chr2L 14126103 intergenic not near genes chr2L_10_14125001 chr2L_14125001 D17-c3 457 chr2L 14222280 14222333 chr2L 14222392 14222445 13 112 24.0 30.5 27.2 0.5 165 chr2L 14222280 intron Dyrk2 - chr2L 14222362 intron Dyrk2 - chr2L 14222445 intron Dyrk2 - chr2L_13_14220001 chr2L_14220001 D17-c3 458 chr2L 14240514 14240563 chr2L 14240631 14240680 9 117 31.0 21.5 26.2 0.3 166 chr2L 14240514 intergenic not near genes chr2L 14240597 intergenic CR44216 + chr2L 14240680 intergenic CR44216 + chr2L_9_14240001 chr2L_14240001 D17-c3 459 chr2L 14245765 14245810 chr2L 15652936 15652981 11 1407171 34.0 35.0 34.5 0.3 1407216 chr2L 14245765 intergenic not near genes chr2L 14949373 intron CG42313 - chr2L 15652981 intron CG4587 - chr2L_11_14945001 chr2L_14945001 D17-c3 460 chr2L 14246258 14246315 chr2L 14246360 14246427 4 110 6.5 8.5 7.5 0.5 169 chr2L 14246258 intergenic not near genes chr2L 14246342 intergenic not near genes chr2L 14246427 intergenic not near genes chr2L_4_14245001 chr2L_14245001 D17-c3 461 chr2L 14367799 14367844 chr2L 14367951 14367996 18 152 5.0 5.0 5.0 3.0 197 chr2L 14367799 intergenic not near genes chr2L 14367898 intergenic not near genes chr2L 14367996 intergenic not near genes chr2L_18_14365001 chr2L_14365001 D17-c3 462 chr2L 14410022 14410052 chr2L 14410142 14410172 7 120 5.0 6.0 5.5 1.1 150 chr2L 14410022 5` UTR CR44733 + chr2L 14410097 intergenic CR44733 + chr2L 14410172 intergenic CR44733 + chr2L_7_14410001 chr2L_14410001 D17-c3 463 chr2L 14462702 14462821 chr2L 14462814 14462942 6 116 0.0 0.0 0.0 6.0 240 chr2L 14462702 intergenic not near genes chr2L 14462822 intergenic not near genes chr2L 14462942 intergenic not near genes chr2L_6_14460001 chr2L_14460001 D17-c3 464 chr2L 14503410 14503422 chr2L 14503513 14503525 5 102 8.5 5.5 7.0 0.6 115 chr2L 14503410 intergenic not near genes chr2L 14503468 intergenic not near genes chr2L 14503525 intergenic not near genes chr2L_5_14500001 chr2L_14500001 D17-c3 465 chr2L 14564177 14564190 chr2L 14564278 14564286 8 97 18.5 10.5 14.5 0.5 109 chr2L 14564177 intergenic CG3473 - chr2L 14564232 intergenic not near genes chr2L 14564286 intergenic not near genes chr2L_8_14560001 chr2L_14560001 D17-c3 466 chr2L 14564191 14564217 chr2L 14564277 14564318 15 98 12.5 10.0 11.2 1.2 127 chr2L 14564191 intergenic CG3473 - chr2L 14564254 intergenic not near genes chr2L 14564318 intergenic not near genes chr2L_15_14560001 chr2L_14560001 D17-c3 467 chr2L 14570695 14570707 chr2L 14570801 14570813 5 106 9.5 5.0 7.2 0.6 118 chr2L 14570695 intergenic not near genes chr2L 14570754 intergenic not near genes chr2L 14570813 intergenic not near genes chr2L_5_14570001 chr2L_14570001 D17-c3 468 chr2L 14588362 14588420 chr2L 14588541 14588559 22 175 5.5 6.5 6.0 3.1 197 chr2L 14588362 intergenic CG42680 - chr2L 14588460 intergenic CG42680 - chr2L 14588559 intergenic CG42680 - chr2L_22_14585001 chr2L_14585001 D17-c3 469 chr2L 14642549 14642597 chr2L 14651737 14651785 roo 19 9188 8.5 6.0 7.2 2.3 9236 chr2L 14642549 intron osp - chr2L 14647167 intron osp - chr2L 14651785 intron osp - chr2L_19_14645001 chr2L_14645001 D17-c3 470 chr2L 14694231 14694284 chr2L 14694380 14694433 19 147 6.0 4.5 5.2 3.1 202 chr2L 14694231 intergenic not near genes chr2L 14694332 intergenic not near genes chr2L 14694433 intergenic not near genes chr2L_19_14690001 chr2L_14690001 D17-c3 471 chr2L 14778784 14778839 chr2L 14779097 14779147 22 306 10.0 10.0 10.0 2.0 363 chr2L 14778784 intergenic not near genes chr2L 14778966 intergenic not near genes chr2L 14779147 intergenic not near genes chr2L_22_14775001 chr2L_14775001 D17-c3 472 chr2L 14803855 14803909 chr2L 14809083 14809137 copia 22 5228 12.0 7.0 9.5 2.1 5282 chr2L 14803855 intergenic not near genes chr2L 14806496 intergenic not near genes chr2L 14809137 intergenic not near genes chr2L_22_14805001 chr2L_14805001 D17-c3 473 chr2L 14833780 14833819 chr2L 14833909 14833948 13 128 3.5 8.0 5.8 1.9 168 chr2L 14833780 intergenic not near genes chr2L 14833864 intergenic not near genes chr2L 14833948 intergenic not near genes chr2L_13_14830001 chr2L_14830001 D17-c3 474 chr2L 14840957 14841007 chr2L 14841070 14841119 16 112 5.0 9.0 7.0 2.0 162 chr2L 14840957 3` UTR CR43805 - chr2L 14841038 3` UTR CR43805 - chr2L 14841119 3` UTR CR43805 - chr2L_16_14840001 chr2L_14840001 D17-c3 475 chr2L 14854572 14854627 chr2L 14854682 14854737 16 109 7.5 6.5 7.0 2.0 165 chr2L 14854572 intergenic not near genes chr2L 14854654 intergenic not near genes chr2L 14854737 intergenic not near genes chr2L_16_14850001 chr2L_14850001 D17-c3 476 chr2L 14889928 14889982 chr2L 14890378 14890432 jockey 21 450 4.5 3.0 3.8 4.4 504 chr2L 14889928 intergenic not near genes chr2L 14890180 intergenic not near genes chr2L 14890432 intergenic not near genes chr2L_21_14890001 chr2L_14890001 D17-c3 477 chr2L 14933353 14933386 chr2L 14933456 14933489 12 103 6.5 7.5 7.0 1.5 136 chr2L 14933353 intron CG42313 - chr2L 14933421 intron CG42313 - chr2L 14933489 intron CG42313 - chr2L_12_14930001 chr2L_14930001 D17-c3 478 chr2L 15000861 15000903 chr2L 15000995 15001015 7 123 36.0 18.0 27.0 0.2 154 chr2L 15000861 intergenic not near genes chr2L 15000938 intergenic not near genes chr2L 15001015 intergenic not near genes chr2L_7_15000001 chr2L_15000001 D17-c3 479 chr2L 15005055 15005062 chr2L 15005224 15005228 5 171 4.5 27.5 16.0 0.3 173 chr2L 15005055 intergenic not near genes chr2L 15005142 intergenic not near genes chr2L 15005228 intergenic not near genes chr2L_5_15005001 chr2L_15005001 D17-c3 480 chr2L 15044703 15044718 chr2L 15044804 15044818 9 101 7.0 0.0 3.5 2.0 115 chr2L 15044703 intergenic ck - chr2L 15044760 intergenic ck - chr2L 15044818 intergenic ck - chr2L_9_15040001 chr2L_15040001 D17-c3 481 chr2L 15072316 15072325 chr2L 15072433 15072442 4 117 10.0 8.5 9.2 0.4 126 chr2L 15072316 intron vas + chr2L 15072379 exon vas + chr2L 15072442 exon vas + chr2L_4_15070001 chr2L_15070001 D17-c3 482 chr2L 15077866 15078095 chr2L 15077979 15078205 31 110 2.5 3.5 3.0 7.8 339 chr2L 15077866 intron CG15270 + chr2L 15078036 intron CG15270 + chr2L 15078205 intron CG15270 + chr2L_31_15075001 chr2L_15075001 D17-c3 483 chr2L 15082635 15082687 chr2L 15082754 15082806 15 119 3.5 4.5 4.0 3.0 171 chr2L 15082635 intron CG15270 + chr2L 15082720 intron CG15270 + chr2L 15082806 intron CG15270 + chr2L_15_15080001 chr2L_15080001 D17-c3 484 chr2L 15098513 15098541 chr2L 15098618 15098646 18 105 14.0 4.5 9.2 1.8 133 chr2L 15098513 intergenic not near genes chr2L 15098580 intergenic not near genes chr2L 15098646 intergenic not near genes chr2L_18_15095001 chr2L_15095001 D17-c3 485 chr2L 15122753 15122808 chr2L 15122858 15122913 13 105 1.5 0.5 1.0 6.5 160 chr2L 15122753 intergenic not near genes chr2L 15122833 intergenic not near genes chr2L 15122913 intergenic not near genes chr2L_13_15120001 chr2L_15120001 D17-c3 486 chr2L 15156596 15156634 chr2L 15156686 15156726 9 91 5.5 6.5 6.0 1.3 130 chr2L 15156596 intergenic not near genes chr2L 15156661 intergenic not near genes chr2L 15156726 intergenic not near genes chr2L_9_15155001 chr2L_15155001 D17-c3 487 chr2L 15159512 15159521 chr2L 15159624 15159628 12 112 8.0 9.0 8.5 1.3 116 chr2L 15159512 3` UTR CR44771 - chr2L 15159570 3` UTR CR44771 - chr2L 15159628 3` UTR CR44771 - chr2L_12_15155001 chr2L_15155001 D17-c3 488 chr2L 15219656 15219692 chr2L 15219758 15219786 21 102 14.0 17.5 15.8 1.2 130 chr2L 15219656 intergenic not near genes chr2L 15219721 intergenic not near genes chr2L 15219786 intergenic not near genes chr2L_21_15215001 chr2L_15215001 D17-c3 489 chr2L 15226350 15226396 chr2L 15226451 15226497 19 100 6.5 4.5 5.5 2.9 147 chr2L 15226350 intergenic not near genes chr2L 15226424 intergenic not near genes chr2L 15226497 intergenic not near genes chr2L_19_15225001 chr2L_15225001 D17-c3 490 chr2L 15233882 15233955 chr2L 15234024 15234076 16 127 0.0 4.0 2.0 5.3 194 chr2L 15233882 intron ZnT35C - chr2L 15233979 intron ZnT35C - chr2L 15234076 intron ZnT35C - chr2L_16_15230001 chr2L_15230001 D17-c3 491 chr2L 15243050 15243067 chr2L 15243189 15243206 8 138 8.5 15.0 11.8 0.6 156 chr2L 15243050 intron ZnT35C - chr2L 15243128 intron ZnT35C - chr2L 15243206 intron ZnT35C - chr2L_8_15240001 chr2L_15240001 D17-c3 492 chr2L 15343511 15343541 chr2L 15343621 15343649 11 110 9.5 0.5 5.0 1.8 138 chr2L 15343511 intergenic not near genes chr2L 15343580 intergenic not near genes chr2L 15343649 intergenic not near genes chr2L_11_15340001 chr2L_15340001 D17-c3 493 chr2L 15394153 15394177 chr2L 15394268 15394292 4 115 7.5 1.5 4.5 0.7 139 chr2L 15394153 intergenic not near genes chr2L 15394222 intergenic not near genes chr2L 15394292 intergenic not near genes chr2L_4_15390001 chr2L_15390001 D17-c3 494 chr2L 15405220 15405265 chr2L 15405327 15405372 27 107 12.5 9.5 11.0 2.2 152 chr2L 15405220 intergenic not near genes chr2L 15405296 intergenic not near genes chr2L 15405372 intergenic not near genes chr2L_27_15405001 chr2L_15405001 D17-c3 495 chr2L 15446024 15446080 chr2L 15453518 15453574 blood 19 7493 5.5 3.0 4.2 3.7 7550 chr2L 15446024 intergenic not near genes chr2L 15449799 intergenic not near genes chr2L 15453574 intergenic not near genes chr2L_19_15445001 chr2L_15445001 D17-c3 496 chr2L 15499886 15499945 chr2L 15499999 15500057 9 111 5.0 5.5 5.2 1.5 171 chr2L 15499886 intron lace + chr2L 15499972 intron lace + chr2L 15500057 intron lace + chr2L_9_15495001 chr2L_15495001 D17-c3 497 chr2L 15510910 15510966 chr2L 15511028 15511085 19 118 3.5 5.0 4.2 3.7 175 chr2L 15510910 intergenic not near genes chr2L 15510998 intergenic not near genes chr2L 15511085 intergenic not near genes chr2L_19_15510001 chr2L_15510001 D17-c3 498 chr2L 15514303 15514326 chr2L 15514412 15514435 5 109 7.0 7.0 7.0 0.6 132 chr2L 15514303 intergenic not near genes chr2L 15514369 intergenic not near genes chr2L 15514435 intergenic not near genes chr2L_5_15510001 chr2L_15510001 D17-c3 499 chr2L 15586385 15586440 chr2L 15593462 15593516 297 18 7077 5.5 5.0 5.2 2.9 7131 chr2L 15586385 intergenic not near genes chr2L 15589950 intergenic not near genes chr2L 15593516 intergenic not near genes chr2L_18_15585001 chr2L_15585001 D17-c3 500 chr2L 15602838 15602895 chr2L 15603293 15603350 20 454 6.0 5.5 5.8 2.9 512 chr2L 15602838 intergenic not near genes chr2L 15603094 intergenic not near genes chr2L 15603350 intergenic not near genes chr2L_20_15600001 chr2L_15600001 D17-c3 501 chr2L 15636652 15636694 chr2L 15636753 15636795 8 101 6.5 7.0 6.8 1.0 143 chr2L 15636652 intergenic not near genes chr2L 15636724 intergenic not near genes chr2L 15636795 intergenic not near genes chr2L_8_15635001 chr2L_15635001 D17-c3 502 chr2L 15773548 15773581 chr2L 15773654 15773687 INE-1 10 106 3.5 2.0 2.8 2.6 139 chr2L 15773548 intergenic CG31826 - chr2L 15773618 intergenic not near genes chr2L 15773687 intergenic not near genes chr2L_10_15770001 chr2L_15770001 D17-c3 503 chr2L 15776377 15776410 chr2L 15776497 15776530 14 120 10.0 12.5 11.2 1.1 153 chr2L 15776377 intergenic CG43760 - chr2L 15776454 3` UTR CG43760 - chr2L 15776530 3` UTR CG43760 - chr2L_14_15775001 chr2L_15775001 D17-c3 504 chr2L 15826869 15826893 chr2L 15829288 15829312 Tabor 8 2419 3.5 7.0 5.2 1.3 2443 chr2L 15826869 intergenic not near genes chr2L 15828090 intergenic not near genes chr2L 15829312 intergenic not near genes chr2L_8_15825001 chr2L_15825001 D17-c3 505 chr2L 15863174 15863233 chr2L 15863426 15863450 23 250 6.0 7.5 6.8 2.9 276 chr2L 15863174 intergenic CR42791 + chr2L 15863312 5` UTR CR42791 + chr2L 15863450 5` UTR CR42791 + chr2L_23_15860001 chr2L_15860001 D17-c3 506 chr2L 15915630 15915680 chr2L 15915733 15915783 22 103 9.0 6.5 7.8 2.5 153 chr2L 15915630 intron beat-Ib - chr2L 15915706 intron beat-Ib - chr2L 15915783 intron beat-Ib - chr2L_22_15915001 chr2L_15915001 D17-c3 507 chr2L 15935167 15935212 chr2L 15935281 15935327 11 114 2.5 0.0 1.2 5.0 160 chr2L 15935167 intron beat-Ib - chr2L 15935247 intron beat-Ib - chr2L 15935327 intron beat-Ib - chr2L_11_15935001 chr2L_15935001 D17-c3 508 chr2L 15956001 15956005 chr2L 15957493 15957497 hobo 4 1492 20.0 8.0 14.0 0.3 1496 chr2L 15956001 intron beat-Ib - chr2L 15956749 intron beat-Ib - chr2L 15957497 intron beat-Ib - chr2L_4_15955001 chr2L_15955001 D17-c3 509 chr2L 15956013 15956057 chr2L 15957490 15957530 hobo 12 1486 7.0 7.0 7.0 1.5 1517 chr2L 15956013 intron beat-Ib - chr2L 15956772 intron beat-Ib - chr2L 15957530 intron beat-Ib - chr2L_12_15955001 chr2L_15955001 D17-c3 510 chr2L 15996554 15996610 chr2L 15996700 15996757 20 147 4.0 3.0 3.5 4.4 203 chr2L 15996554 intergenic not near genes chr2L 15996656 intergenic not near genes chr2L 15996757 intergenic not near genes chr2L_20_15995001 chr2L_15995001 D17-c3 511 chr2L 16001451 16001494 chr2L 16001564 16001607 7 113 0.0 4.5 2.2 2.2 156 chr2L 16001451 intron beat-Ic + chr2L 16001529 intron beat-Ic + chr2L 16001607 intron beat-Ic + chr2L_7_16000001 chr2L_16000001 D17-c3 512 chr2L 16008669 16008723 chr2L 16008772 16008826 11 103 2.0 4.0 3.0 2.8 157 chr2L 16008669 intron beat-Ic + chr2L 16008748 intron beat-Ic + chr2L 16008826 intron beat-Ic + chr2L_11_16005001 chr2L_16005001 D17-c3 513 chr2L 16058100 16058150 chr2L 16058266 16058316 26 166 6.5 7.0 6.8 3.3 216 chr2L 16058100 intron beat-Ia + chr2L 16058208 intron beat-Ia + chr2L 16058316 intron beat-Ia + chr2L_26_16055001 chr2L_16055001 D17-c3 514 chr2L 10176024 10176024 chr2L 16071771 16071771 5 5895747 31.0 47.5 39.2 0.1 5895747 chr2L 10176024 intron CG44153 - chr2L 13123898 intergenic not near genes chr2L 16071771 intron beat-Ia + chr2L_5_13120001 chr2L_13120001 D17-c3 515 chr2L 16071771 16071771 chr2L 16217660 16217661 copia 55 145889 46.5 35.0 40.8 1.3 145890 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217661 intergenic not near genes chr2L_55_16140001 chr2L_16140001 D17-c3 516 chr2L 16141142 16141191 chr2L 16146374 16146423 copia 10 5232 4.0 5.5 4.8 1.7 5281 chr2L 16141142 intergenic not near genes chr2L 16143782 intergenic not near genes chr2L 16146423 intergenic not near genes chr2L_10_16140001 chr2L_16140001 D17-c3 517 chr2L 16153710 16153749 chr2L 16160789 16160828 297 26 7078 8.5 9.0 8.8 2.7 7118 chr2L 16153710 intergenic not near genes chr2L 16157269 intergenic not near genes chr2L 16160828 intergenic not near genes chr2L_26_16155001 chr2L_16155001 D17-c3 518 chr2L 16171744 16171796 chr2L 16171863 16171915 26 118 5.5 10.5 8.0 2.9 171 chr2L 16171744 intron Ca-alpha1D + chr2L 16171830 intron Ca-alpha1D + chr2L 16171915 intron Ca-alpha1D + chr2L_26_16170001 chr2L_16170001 D17-c3 519 chr2L 9084336 9084340 chr2L 16217660 16217660 47 7133321 57.5 35.0 46.2 1.0 7133324 chr2L 9084336 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_47_12650001 chr2L_12650001 D17-c3 520 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 73 145889 46.5 35.0 40.8 1.7 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_73_16140001 chr2L_16140001 D17-c3 521 chr2L 16224924 16224939 chr2L 16225077 16225092 9 152 19.0 19.0 19.0 0.5 168 chr2L 16224924 intergenic not near genes chr2L 16225008 intergenic not near genes chr2L 16225092 intergenic not near genes chr2L_9_16225001 chr2L_16225001 D17-c3 522 chr2L 16254867 16254914 chr2L 16255150 16255198 18 284 6.0 7.5 6.8 2.3 331 chr2L 16254867 intron PRL-1 - chr2L 16255032 intron PRL-1 - chr2L 16255198 intron PRL-1 - chr2L_18_16255001 chr2L_16255001 D17-c3 523 chr2L 16280235 16280282 chr2L 16281430 16281478 1360 31 1195 8.0 12.5 10.2 2.8 1243 chr2L 16280235 intron crp - chr2L 16280856 intron crp - chr2L 16281478 intron crp - chr2L_31_16280001 chr2L_16280001 D17-c3 524 chr2L 16354759 16354784 chr2L 16354876 16354901 12 116 3.5 8.0 5.8 1.8 142 chr2L 16354759 intergenic CaBP1 -,CG4455 + chr2L 16354830 intergenic CaBP1 -,CG4455 + chr2L 16354901 3` UTR CaBP1 - chr2L_12_16350001 chr2L_16350001 D17-c3 525 chr2L 16391780 16391824 chr2L 16391881 16391914 9 100 1.5 0.0 0.8 5.0 134 chr2L 16391780 intergenic not near genes chr2L 16391847 intergenic not near genes chr2L 16391914 intergenic not near genes chr2L_9_16390001 chr2L_16390001 D17-c3 526 chr2L 16408095 16408155 chr2L 16408227 16408282 4 131 0.0 3.0 1.5 1.6 187 chr2L 16408095 intron CG5888 - chr2L 16408188 intron CG5888 - chr2L 16408282 intron CG5888 - chr2L_4_16405001 chr2L_16405001 D17-c3 527 chr2L 16434083 16434117 chr2L 16434190 16434224 14 107 7.5 3.0 5.2 2.3 141 chr2L 16434083 intron CG5888 - chr2L 16434154 intron CG5888 - chr2L 16434224 intron CG5888 - chr2L_14_16430001 chr2L_16430001 D17-c3 528 chr2L 16458803 16458815 chr2L 16459024 16459036 6 221 7.0 3.0 5.0 1.0 233 chr2L 16458803 intergenic not near genes chr2L 16458920 intergenic not near genes chr2L 16459036 intergenic not near genes chr2L_6_16455001 chr2L_16455001 D17-c3 529 chr2L 16480579 16480638 chr2L 16480692 16480751 30 111 7.5 5.0 6.2 4.2 172 chr2L 16480579 intron dac - chr2L 16480665 intron dac - chr2L 16480751 intron dac - chr2L_30_16480001 chr2L_16480001 D17-c3 530 chr2L 16507943 16507966 chr2L 16508056 16508079 7 113 0.0 10.5 5.2 1.1 136 chr2L 16507943 intergenic CG5953 -,Tpr2 + chr2L 16508011 intergenic CG5953 -,Tpr2 + chr2L 16508079 3` UTR CG5953 - chr2L_7_16505001 chr2L_16505001 D17-c3 531 chr2L 16511962 16511994 chr2L 16519114 16519146 HMS-Beagle 5 7150 3.5 5.5 4.5 0.9 7184 chr2L 16511962 intron CG5953 - chr2L 16515554 intron CG5953 - chr2L 16519146 intron CG5953 - chr2L_5_16515001 chr2L_16515001 D17-c3 532 chr2L 16535224 16535277 chr2L 16535369 16535422 16 144 6.0 2.5 4.2 3.1 198 chr2L 16535224 3` UTR CR45355 - chr2L 16535323 intergenic CR45355 - chr2L 16535422 intergenic CR45355 - chr2L_16_16535001 chr2L_16535001 D17-c3 533 chr2L 16573227 16573234 chr2L 16573325 16573340 8 105 33.5 24.0 28.8 0.3 113 chr2L 16573227 intron CG42389 + chr2L 16573284 intron CG42389 + chr2L 16573340 intron CG42389 + chr2L_8_16570001 chr2L_16570001 D17-c3 534 chr2L 16573236 16573262 chr2L 16573324 16573370 26 97 20.5 23.5 22.0 1.1 134 chr2L 16573236 intron CG42389 + chr2L 16573303 intron CG42389 + chr2L 16573370 intron CG42389 + chr2L_26_16570001 chr2L_16570001 D17-c3 535 chr2L 16583076 16583113 chr2L 16583189 16583226 10 113 5.0 4.5 4.8 1.7 150 chr2L 16583076 intron CG42389 + chr2L 16583151 intron CG42389 + chr2L 16583226 intron CG42389 + chr2L_10_16580001 chr2L_16580001 D17-c3 536 chr2L 16583527 16583578 chr2L 16583686 16583732 15 157 4.5 5.0 4.8 2.6 205 chr2L 16583527 intron CG42389 + chr2L 16583630 intron CG42389 + chr2L 16583732 intron CG42389 + chr2L_15_16580001 chr2L_16580001 D17-c3 537 chr2L 16693887 16693940 chr2L 16693993 16694046 26 106 10.5 6.0 8.2 2.8 159 chr2L 16693887 intron grp + chr2L 16693966 intron grp + chr2L 16694046 intron grp + chr2L_26_16690001 chr2L_16690001 D17-c3 538 chr2L 16710694 16710747 chr2L 16710803 16710856 20 109 8.5 4.5 6.5 2.7 162 chr2L 16710694 intron CG31808 - chr2L 16710775 intron CG31808 - chr2L 16710856 intron CG31808 - chr2L_20_16710001 chr2L_16710001 D17-c3 539 chr2L 16852793 16852808 chr2L 16859960 16859975 Doc4-element 6 7167 10.5 9.5 10.0 0.5 7182 chr2L 16852793 intergenic CG31810 - chr2L 16856384 intron CG31809 - chr2L 16859975 intergenic CG6012 - chr2L_6_16855001 chr2L_16855001 D17-c3 540 chr2L 16867001 16867036 chr2L 16867121 16867156 11 120 4.0 4.0 4.0 2.2 155 chr2L 16867001 intergenic not near genes chr2L 16867078 intergenic not near genes chr2L 16867156 intergenic not near genes chr2L_11_16865001 chr2L_16865001 D17-c3 541 chr2L 16880837 16880845 chr2L 16880944 16880952 7 107 6.5 9.0 7.8 0.8 115 chr2L 16880837 intron,intron CG31743 +,CG34313 + chr2L 16880894 intron,intron CG31743 +,CG34313 + chr2L 16880952 intron,intron CG31743 +,CG34313 + chr2L_7_16880001 chr2L_16880001 D17-c3 542 chr2L 16927446 16927490 chr2L 16927563 16927567 13 110 18.0 9.5 13.8 0.9 121 chr2L 16927446 intergenic not near genes chr2L 16927506 intergenic not near genes chr2L 16927567 intergenic not near genes chr2L_13_16925001 chr2L_16925001 D17-c3 543 chr2L 16942909 16942961 chr2L 16943012 16943064 9 102 5.0 6.0 5.5 1.4 155 chr2L 16942909 intergenic not near genes chr2L 16942986 intergenic not near genes chr2L 16943064 intergenic not near genes chr2L_9_16940001 chr2L_16940001 D17-c3 544 chr2L 16958084 16958134 chr2L 16962897 16962947 Doc 18 4813 3.0 3.0 3.0 4.5 4863 chr2L 16958084 intergenic not near genes chr2L 16960516 intergenic not near genes chr2L 16962947 intergenic not near genes chr2L_18_16960001 chr2L_16960001 D17-c3 545 chr2L 16991454 16991512 chr2L 16991585 16991643 16 130 3.5 4.5 4.0 3.2 189 chr2L 16991454 intron beat-IIIb + chr2L 16991548 intron beat-IIIb + chr2L 16991643 intron beat-IIIb + chr2L_16_16990001 chr2L_16990001 D17-c3 546 chr2L 16993588 16993636 chr2L 16993700 16993748 11 112 5.0 4.0 4.5 2.0 160 chr2L 16993588 3` UTR beat-IIIb + chr2L 16993668 3` UTR beat-IIIb + chr2L 16993748 3` UTR beat-IIIb + chr2L_11_16990001 chr2L_16990001 D17-c3 547 chr2L 17005388 17005436 chr2L 17005510 17005558 19 119 7.5 7.5 7.5 2.2 170 chr2L 17005388 intergenic not near genes chr2L 17005473 intergenic not near genes chr2L 17005558 intergenic not near genes chr2L_19_17005001 chr2L_17005001 D17-c3 548 chr2L 17016376 17016425 chr2L 17016657 17016706 21 281 9.0 4.5 6.8 2.7 330 chr2L 17016376 intergenic not near genes chr2L 17016541 intergenic not near genes chr2L 17016706 intergenic not near genes chr2L_21_17015001 chr2L_17015001 D17-c3 549 chr2L 17032482 17032521 chr2L 17032589 17032631 14 109 4.0 6.0 5.0 2.3 149 chr2L 17032482 intergenic not near genes chr2L 17032556 intergenic not near genes chr2L 17032631 intergenic not near genes chr2L_14_17030001 chr2L_17030001 D17-c3 550 chr2L 17033892 17033943 chr2L 17034002 17034053 21 110 7.5 6.5 7.0 2.6 161 chr2L 17033892 intergenic not near genes chr2L 17033972 intergenic not near genes chr2L 17034053 intergenic not near genes chr2L_21_17030001 chr2L_17030001 D17-c3 551 chr2L 17050010 17050050 chr2L 17050112 17050137 19 107 7.0 8.5 7.8 2.2 127 chr2L 17050010 intergenic not near genes chr2L 17050074 intergenic not near genes chr2L 17050137 intergenic not near genes chr2L_19_17050001 chr2L_17050001 D17-c3 552 chr2L 17052392 17052443 chr2L 17052529 17052580 11 137 1.0 5.5 3.2 2.6 188 chr2L 17052392 intergenic not near genes chr2L 17052486 intergenic not near genes chr2L 17052580 intergenic not near genes chr2L_11_17050001 chr2L_17050001 D17-c3 553 chr2L 17053258 17053310 chr2L 17053693 17053745 16 435 7.5 7.0 7.2 2.0 487 chr2L 17053258 intergenic not near genes chr2L 17053502 intergenic not near genes chr2L 17053745 intergenic not near genes chr2L_16_17050001 chr2L_17050001 D17-c3 554 chr2L 17058419 17058432 chr2L 17058597 17058609 4 178 9.5 14.0 11.8 0.3 190 chr2L 17058419 intergenic not near genes chr2L 17058514 intergenic not near genes chr2L 17058609 intergenic not near genes chr2L_4_17055001 chr2L_17055001 D17-c3 555 chr2L 17062735 17062788 chr2L 17062842 17062885 7 106 3.5 6.5 5.0 1.2 150 chr2L 17062735 intergenic not near genes chr2L 17062810 intergenic not near genes chr2L 17062885 intergenic not near genes chr2L_7_17060001 chr2L_17060001 D17-c3 556 chr2L 17070176 17070214 chr2L 17070297 17070335 10 118 3.0 5.0 4.0 2.0 159 chr2L 17070176 intergenic not near genes chr2L 17070256 intergenic not near genes chr2L 17070335 intergenic not near genes chr2L_10_17070001 chr2L_17070001 D17-c3 557 chr2L 17074493 17074517 chr2L 17074598 17074622 10 105 4.0 6.0 5.0 1.7 129 chr2L 17074493 intergenic not near genes chr2L 17074558 intergenic not near genes chr2L 17074622 intergenic not near genes chr2L_10_17070001 chr2L_17070001 D17-c3 558 chr2L 17076515 17076550 chr2L 17076616 17076661 21 110 13.5 6.5 10.0 1.9 146 chr2L 17076515 intergenic not near genes chr2L 17076588 intergenic not near genes chr2L 17076661 intergenic not near genes chr2L_21_17075001 chr2L_17075001 D17-c3 559 chr2L 17087353 17087405 chr2L 17087496 17087548 20 136 6.0 6.0 6.0 2.9 195 chr2L 17087353 intergenic CG12620 + chr2L 17087450 intergenic CG12620 + chr2L 17087548 intergenic CG12620 + chr2L_20_17085001 chr2L_17085001 D17-c3 560 chr2L 17101021 17101073 chr2L 17101525 17101578 16 506 41.0 30.5 35.8 0.4 557 chr2L 17101021 intergenic not near genes chr2L 17101300 intergenic not near genes chr2L 17101578 intergenic not near genes chr2L_16_17100001 chr2L_17100001 D17-c3 561 chr2L 17104045 17104094 chr2L 17104341 17104390 12 296 12.0 17.5 14.8 0.8 345 chr2L 17104045 intergenic not near genes chr2L 17104218 intergenic not near genes chr2L 17104390 intergenic not near genes chr2L_12_17100001 chr2L_17100001 D17-c3 562 chr2L 17108262 17108279 chr2L 17108410 17108427 5 148 2.0 12.5 7.2 0.6 165 chr2L 17108262 intergenic not near genes chr2L 17108344 intergenic not near genes chr2L 17108427 intergenic not near genes chr2L_5_17105001 chr2L_17105001 D17-c3 563 chr2L 17158714 17158762 chr2L 17158841 17158889 22 126 8.0 4.0 6.0 3.1 175 chr2L 17158714 5` UTR,exon CG34106 +,beat-IIIa + chr2L 17158802 intron,intron CG34106 +,beat-IIIa + chr2L 17158889 intron,intron CG34106 +,beat-IIIa + chr2L_22_17155001 chr2L_17155001 D17-c3 564 chr2L 17167542 17167594 chr2L 17167808 17167860 pogo 18 266 3.5 5.5 4.5 3.3 318 chr2L 17167542 intron,intron CG34106 +,beat-IIIa + chr2L 17167701 intron,intron CG34106 +,beat-IIIa + chr2L 17167860 intron,intron CG34106 +,beat-IIIa + chr2L_18_17165001 chr2L_17165001 D17-c3 565 chr2L 17169044 17169096 chr2L 17169155 17169207 16 111 4.5 7.5 6.0 2.3 163 chr2L 17169044 intron,intron CG34106 +,beat-IIIa + chr2L 17169126 intron,intron CG34106 +,beat-IIIa + chr2L 17169207 intron,intron CG34106 +,beat-IIIa + chr2L_16_17165001 chr2L_17165001 D17-c3 566 chr2L 17187423 17187474 chr2L 17187619 17187669 16 196 4.5 4.5 4.5 2.9 246 chr2L 17187423 intergenic beat-IIIc - chr2L 17187546 intergenic beat-IIIc - chr2L 17187669 3` UTR beat-IIIc - chr2L_16_17185001 chr2L_17185001 D17-c3 567 chr2L 17199139 17199184 chr2L 17200631 17200676 hobo 15 1492 4.5 1.5 3.0 3.8 1537 chr2L 17199139 intron beat-IIIc - chr2L 17199908 intron beat-IIIc - chr2L 17200676 intron beat-IIIc - chr2L_15_17195001 chr2L_17195001 D17-c3 568 chr2L 17234702 17234737 chr2L 17234833 17234868 6 127 10.0 16.5 13.2 0.4 166 chr2L 17234702 intron beat-IIIc - chr2L 17234785 intron beat-IIIc - chr2L 17234868 intron beat-IIIc - chr2L_6_17230001 chr2L_17230001 D17-c3 569 chr2L 17239163 17239220 chr2L 17239272 17239329 35 104 7.0 5.5 6.2 4.9 166 chr2L 17239163 intron beat-IIIc - chr2L 17239246 intron beat-IIIc - chr2L 17239329 intron beat-IIIc - chr2L_35_17235001 chr2L_17235001 D17-c3 570 chr2L 17273172 17273222 chr2L 17277980 17278017 F-element 18 4807 10.5 6.5 8.5 1.9 4845 chr2L 17273172 intergenic not near genes chr2L 17275594 intergenic not near genes chr2L 17278017 intergenic not near genes chr2L_18_17275001 chr2L_17275001 D17-c3 571 chr2L 17327888 17327929 chr2L 17327998 17328040 15 111 9.5 8.0 8.8 1.5 152 chr2L 17327888 intergenic not near genes chr2L 17327964 intergenic not near genes chr2L 17328040 intergenic not near genes chr2L_15_17325001 chr2L_17325001 D17-c3 572 chr2L 17328736 17328786 chr2L 17329045 17329101 23 314 7.5 1.0 4.2 4.4 365 chr2L 17328736 intergenic not near genes chr2L 17328918 intergenic not near genes chr2L 17329101 intergenic not near genes chr2L_23_17325001 chr2L_17325001 D17-c3 573 chr2L 17329045 17329105 chr2L 17329198 17329258 24 153 1.0 4.0 2.5 6.9 213 chr2L 17329045 intergenic not near genes chr2L 17329152 intergenic not near genes chr2L 17329258 intergenic not near genes chr2L_24_17325001 chr2L_17325001 D17-c3 574 chr2L 17337295 17337354 chr2L 17337410 17337470 20 115 5.5 5.5 5.5 3.1 175 chr2L 17337295 intergenic not near genes chr2L 17337382 intergenic not near genes chr2L 17337470 intergenic not near genes chr2L_20_17335001 chr2L_17335001 D17-c3 575 chr2L 17379689 17379706 chr2L 17379799 17379816 11 110 5.5 3.5 4.5 2.0 127 chr2L 17379689 intron Lrch - chr2L 17379752 intron Lrch - chr2L 17379816 intron Lrch - chr2L_11_17375001 chr2L_17375001 D17-c3 576 chr2L 17405356 17405373 chr2L 17405496 17405512 4 136 23.5 37.0 30.2 0.1 156 chr2L 17405356 exon CLIP-190 + chr2L 17405434 intron CLIP-190 + chr2L 17405512 exon CLIP-190 + chr2L_4_17405001 chr2L_17405001 D17-c3 577 chr2L 17432622 17432666 chr2L 17432723 17432768 20 102 4.5 7.0 5.8 2.9 146 chr2L 17432622 intron Dif - chr2L 17432695 intron Dif - chr2L 17432768 intron Dif - chr2L_20_17430001 chr2L_17430001 D17-c3 578 chr2L 17456374 17456426 chr2L 17456491 17456532 4 106 0.5 0.5 0.5 2.7 158 chr2L 17456374 intron CG5050 + chr2L 17456453 intron CG5050 + chr2L 17456532 intron CG5050 + chr2L_4_17455001 chr2L_17455001 D17-c3 579 chr2L 17511646 17511658 chr2L 17511813 17511825 4 167 11.5 29.0 20.2 0.2 179 chr2L 17511646 intron Dhc36C + chr2L 17511736 intron Dhc36C + chr2L 17511825 exon Dhc36C + chr2L_4_17510001 chr2L_17510001 D17-c3 580 chr2L 17517830 17517869 chr2L 17517938 17517977 6 108 14.5 5.5 10.0 0.5 147 chr2L 17517830 intron Dhc36C + chr2L 17517904 intron Dhc36C + chr2L 17517977 intron Dhc36C + chr2L_6_17515001 chr2L_17515001 D17-c3 581 chr2L 17580878 17580926 chr2L 17581757 17581805 4 879 8.5 16.0 12.2 0.3 927 chr2L 17580878 intergenic not near genes chr2L 17581342 intergenic not near genes chr2L 17581805 intergenic not near genes chr2L_4_17580001 chr2L_17580001 D17-c3 582 chr2L 17594360 17594414 chr2L 17594482 17594535 8 122 11.0 12.5 11.8 0.6 175 chr2L 17594360 intron Sytalpha + chr2L 17594448 intron Sytalpha + chr2L 17594535 intron Sytalpha + chr2L_8_17590001 chr2L_17590001 D17-c3 583 chr2L 17607458 17607475 chr2L 17607581 17607598 7 123 10.0 1.0 5.5 1.1 140 chr2L 17607458 intergenic CR44412 - chr2L 17607528 intergenic CR44412 - chr2L 17607598 intergenic CR44412 - chr2L_7_17605001 chr2L_17605001 D17-c3 584 chr2L 17616477 17616486 chr2L 17616588 17616597 4 111 15.5 13.5 14.5 0.3 120 chr2L 17616477 intergenic not near genes chr2L 17616537 intergenic not near genes chr2L 17616597 intergenic not near genes chr2L_4_17615001 chr2L_17615001 D17-c3 585 chr2L 17687493 17687521 chr2L 17692263 17692291 F-element 14 4770 5.5 8.0 6.8 1.8 4798 chr2L 17687493 intron CadN - chr2L 17689892 intron CadN - chr2L 17692291 intron CadN - chr2L_14_17685001 chr2L_17685001 D17-c3 586 chr2L 17705702 17705754 chr2L 17705837 17705879 6 132 3.0 4.0 3.5 1.3 177 chr2L 17705702 intron,3` UTR CadN -,CG43231 + chr2L 17705790 intron,3` UTR CadN -,CG43231 + chr2L 17705879 intron,intron CadN -,CG43231 + chr2L_6_17705001 chr2L_17705001 D17-c3 587 chr2L 17718366 17718417 chr2L 17718487 17718547 17 126 29.0 28.0 28.5 0.6 181 chr2L 17718366 intron CadN - chr2L 17718456 intron CadN - chr2L 17718547 intron CadN - chr2L_17_17715001 chr2L_17715001 D17-c3 588 chr2L 17723767 17723799 chr2L 17723885 17723917 10 118 5.5 4.0 4.8 1.7 150 chr2L 17723767 intron CadN - chr2L 17723842 intron CadN - chr2L 17723917 intron CadN - chr2L_10_17720001 chr2L_17720001 D17-c3 589 chr2L 17727854 17727859 chr2L 17729339 17729351 hobo 4 1490 8.0 14.0 11.0 0.3 1497 chr2L 17727854 intron CadN - chr2L 17728602 intron CadN - chr2L 17729351 intron CadN - chr2L_4_17725001 chr2L_17725001 D17-c3 590 chr2L 17727860 17727877 chr2L 17729335 17729369 hobo 14 1487 6.0 13.5 9.8 1.3 1509 chr2L 17727860 intron CadN - chr2L 17728614 intron CadN - chr2L 17729369 intron CadN - chr2L_14_17725001 chr2L_17725001 D17-c3 591 chr2L 17810989 17811034 chr2L 17811100 17811147 12 111 22.0 17.0 19.5 0.6 158 chr2L 17810989 intron CadN2 - chr2L 17811068 intron CadN2 - chr2L 17811147 intron CadN2 - chr2L_12_17810001 chr2L_17810001 D17-c3 592 chr2L 17819899 17819950 chr2L 17825127 17825178 copia 27 5228 7.0 10.0 8.5 2.8 5279 chr2L 17819899 intron CadN2 - chr2L 17822538 intron CadN2 - chr2L 17825178 intron CadN2 - chr2L_27_17820001 chr2L_17820001 D17-c3 593 chr2L 17855474 17855505 chr2L 17855576 17855608 8 103 20.5 16.0 18.2 0.4 134 chr2L 17855474 intron CadN2 - chr2L 17855541 intron CadN2 - chr2L 17855608 intron CadN2 - chr2L_8_17855001 chr2L_17855001 D17-c3 594 chr2L 17880578 17880621 chr2L 17880715 17880758 9 137 9.5 13.0 11.2 0.7 180 chr2L 17880578 intergenic not near genes chr2L 17880668 intergenic not near genes chr2L 17880758 intergenic not near genes chr2L_9_17880001 chr2L_17880001 D17-c3 595 chr2L 17911938 17911989 chr2L 17914141 17914200 pogo 27 2205 10.0 6.5 8.2 2.9 2262 chr2L 17911938 intergenic not near genes chr2L 17913069 intergenic not near genes chr2L 17914200 intergenic CG43271 - chr2L_27_17910001 chr2L_17910001 D17-c3 596 chr2L 17943877 17943918 chr2L 17944000 17944046 7 127 15.0 16.0 15.5 0.4 169 chr2L 17943877 intergenic not near genes chr2L 17943962 intergenic not near genes chr2L 17944046 intergenic not near genes chr2L_7_17940001 chr2L_17940001 D17-c3 597 chr2L 17951929 17951975 chr2L 17953421 17953467 hobo 16 1492 7.0 6.0 6.5 2.1 1538 chr2L 17951929 intergenic CR44398 -,CR44397 - chr2L 17952698 intergenic not near genes chr2L 17953467 intergenic not near genes chr2L_16_17950001 chr2L_17950001 D17-c3 598 chr2L 17989974 17990024 chr2L 17990075 17990125 24 96 38.5 39.0 38.8 0.6 151 chr2L 17989974 intergenic Prosbeta5R2 + chr2L 17990050 intergenic Prosbeta5R2 + chr2L 17990125 intergenic Prosbeta5R2 + chr2L_24_17990001 chr2L_17990001 D17-c3 599 chr2L 17986755 17986809 chr2L 17991458 17991512 6 4706 40.0 52.0 46.0 0.1 4757 chr2L 17986755 exon CG5681 + chr2L 17989134 intergenic not near genes chr2L 17991512 3` UTR Prosbeta5R2 + chr2L_6_17985001 chr2L_17985001 D17-c3 600 chr2L 17988362 17988417 chr2L 17991935 17991990 18 3573 33.0 30.0 31.5 0.6 3628 chr2L 17988362 3` UTR CG5681 + chr2L 17990176 intergenic Prosbeta5R2 + chr2L 17991990 intergenic Prosbeta5R2 + chr2L_18_17990001 chr2L_17990001 D17-c3 601 chr2L 18026963 18027016 chr2L 18027328 18027378 11 365 18.0 21.5 19.8 0.5 415 chr2L 18026963 5` UTR rdo + chr2L 18027170 intron rdo + chr2L 18027378 intron rdo + chr2L_11_18025001 chr2L_18025001 D17-c3 602 chr2L 18040726 18040757 chr2L 18040840 18040871 6 114 12.0 20.0 16.0 0.4 145 chr2L 18040726 intron rdo + chr2L 18040798 intron rdo + chr2L 18040871 intron rdo + chr2L_6_18040001 chr2L_18040001 D17-c3 603 chr2L 18041407 18041464 chr2L 18041701 18041758 10 294 14.5 14.0 14.2 0.7 351 chr2L 18041407 intron rdo + chr2L 18041582 intron rdo + chr2L 18041758 intron rdo + chr2L_10_18040001 chr2L_18040001 D17-c3 604 chr2L 18047008 18047059 chr2L 18047115 18047166 18 105 23.0 26.0 24.5 0.7 158 chr2L 18047008 intron rdo + chr2L 18047087 intron rdo + chr2L 18047166 intron rdo + chr2L_18_18045001 chr2L_18045001 D17-c3 605 chr2L 18051857 18051900 chr2L 18061029 18061072 roo 7 9171 10.0 6.0 8.0 0.8 9215 chr2L 18051857 intron rdo + chr2L 18056464 intron rdo + chr2L 18061072 intron rdo + chr2L_7_18055001 chr2L_18055001 D17-c3 606 chr2L 18066347 18066388 chr2L 18066451 18066492 5 104 9.5 8.5 9.0 0.5 145 chr2L 18066347 intron rdo + chr2L 18066420 intron rdo + chr2L 18066492 intron rdo + chr2L_5_18065001 chr2L_18065001 D17-c3 607 chr2L 18103012 18103066 chr2L 18103124 18103173 15 111 19.5 25.5 22.5 0.6 161 chr2L 18103012 intergenic not near genes chr2L 18103092 intergenic not near genes chr2L 18103173 intergenic not near genes chr2L_15_18100001 chr2L_18100001 D17-c3 608 chr2L 18106006 18106048 chr2L 18106153 18106195 6 147 17.5 19.5 18.5 0.3 189 chr2L 18106006 intergenic not near genes chr2L 18106100 intergenic not near genes chr2L 18106195 intergenic not near genes chr2L_6_18105001 chr2L_18105001 D17-c3 609 chr2L 18110063 18110098 chr2L 18110188 18110223 7 125 11.0 9.5 10.2 0.6 160 chr2L 18110063 intergenic not near genes chr2L 18110143 intergenic not near genes chr2L 18110223 intergenic not near genes chr2L_7_18110001 chr2L_18110001 D17-c3 610 chr2L 18154296 18154350 chr2L 18154408 18154462 16 111 32.0 31.0 31.5 0.5 166 chr2L 18154296 exon CG17681 + chr2L 18154379 exon CG17681 + chr2L 18154462 3` UTR CG17681 + chr2L_16_18150001 chr2L_18150001 D17-c3 611 chr2L 18184985 18185018 chr2L 18185124 18185158 4 140 3.0 1.0 2.0 1.3 173 chr2L 18184985 intron,5` UTR CG42750 -,CG7180 - chr2L 18185072 intron CG42750 - chr2L 18185158 intron CG42750 - chr2L_4_18185001 chr2L_18185001 D17-c3 612 chr2L 18235047 18235055 chr2L 18235204 18235212 4 157 34.5 32.0 33.2 0.1 165 chr2L 18235047 intron CG42750 - chr2L 18235130 intron CG42750 - chr2L 18235212 intron CG42750 - chr2L_4_18235001 chr2L_18235001 D17-c3 613 chr2L 18235058 18235098 chr2L 18235194 18235229 20 139 27.0 31.0 29.0 0.7 171 chr2L 18235058 intron CG42750 - chr2L 18235144 intron CG42750 - chr2L 18235229 intron CG42750 - chr2L_20_18235001 chr2L_18235001 D17-c3 614 chr2L 18257103 18257137 chr2L 18257208 18257242 5 105 10.5 11.5 11.0 0.4 139 chr2L 18257103 intron,5` UTR CG42750 -,CR43408 + chr2L 18257172 intron,5` UTR CG42750 -,CR43408 + chr2L 18257242 intron CG42750 - chr2L_5_18255001 chr2L_18255001 D17-c3 615 chr2L 18298929 18298966 chr2L 18299008 18299008 19 86 11.5 5.0 8.2 2.1 79 chr2L 18298929 intergenic not near genes chr2L 18298968 intergenic not near genes chr2L 18299008 intergenic not near genes chr2L_19_18295001 chr2L_18295001 D17-c3 616 chr2L 18343665 18343693 chr2L 18343789 18343797 7 121 15.5 17.0 16.2 0.4 132 chr2L 18343665 intron Fas3 + chr2L 18343731 intron Fas3 + chr2L 18343797 intron Fas3 + chr2L_7_18340001 chr2L_18340001 D17-c3 617 chr2L 18364253 18364291 chr2L 18364378 18364416 7 125 11.5 18.5 15.0 0.4 163 chr2L 18364253 intron Fas3 + chr2L 18364334 intron Fas3 + chr2L 18364416 intron Fas3 + chr2L_7_18360001 chr2L_18360001 D17-c3 618 chr2L 18366130 18366185 chr2L 18366231 18366286 8 100 13.0 14.5 13.8 0.5 156 chr2L 18366130 intron Fas3 + chr2L 18366208 intron Fas3 + chr2L 18366286 intron Fas3 + chr2L_8_18365001 chr2L_18365001 D17-c3 619 chr2L 18370764 18370809 chr2L 18370950 18370995 6 186 13.5 10.0 11.8 0.5 231 chr2L 18370764 intron Fas3 + chr2L 18370880 intron Fas3 + chr2L 18370995 intron Fas3 + chr2L_6_18370001 chr2L_18370001 D17-c3 620 chr2L 18408008 18408034 chr2L 18412817 18412843 Doc 11 4809 12.5 6.0 9.2 1.1 4835 chr2L 18408008 intergenic not near genes chr2L 18410426 intergenic not near genes chr2L 18412843 intergenic not near genes chr2L_11_18410001 chr2L_18410001 D17-c3 621 chr2L 18440303 18440352 chr2L 18440434 18440483 7 131 7.5 12.0 9.8 0.6 180 chr2L 18440303 intergenic not near genes chr2L 18440393 intergenic not near genes chr2L 18440483 intergenic not near genes chr2L_7_18440001 chr2L_18440001 D17-c3 622 chr2L 18442076 18442124 chr2L 18442233 18442281 12 157 23.5 22.0 22.8 0.5 205 chr2L 18442076 3` UTR RpS26 - chr2L 18442178 3` UTR RpS26 - chr2L 18442281 3` UTR RpS26 - chr2L_12_18440001 chr2L_18440001 D17-c3 623 chr2L 18443844 18443881 chr2L 18443949 18443986 4 105 1.0 1.5 1.2 1.8 142 chr2L 18443844 intergenic not near genes chr2L 18443915 intergenic not near genes chr2L 18443986 intergenic not near genes chr2L_4_18440001 chr2L_18440001 D17-c3 624 chr2L 18546201 18546247 chr2L 18546312 18546358 6 111 17.5 18.0 17.8 0.3 157 chr2L 18546201 intron Pde11 - chr2L 18546280 intron Pde11 - chr2L 18546358 intron Pde11 - chr2L_6_18545001 chr2L_18545001 D17-c3 625 chr2L 16217660 16217660 chr2L 18622718 18622718 6 2405058 33.5 55.5 44.5 0.1 2405058 chr2L 16217660 intergenic not near genes chr2L 17420189 intron Dif - chr2L 18622718 intron MESR3 + chr2L_6_17420001 chr2L_17420001 D17-c3 626 chr2L 18629346 18629404 chr2L 18629456 18629514 19 109 18.0 16.5 17.2 1.0 168 chr2L 18629346 intron MESR3 + chr2L 18629430 intron MESR3 + chr2L 18629514 intron MESR3 + chr2L_19_18625001 chr2L_18625001 D17-c3 627 chr2L 18630772 18630826 chr2L 18630877 18630932 15 104 18.5 19.5 19.0 0.8 160 chr2L 18630772 intron MESR3 + chr2L 18630852 intron MESR3 + chr2L 18630932 intron MESR3 + chr2L_15_18630001 chr2L_18630001 D17-c3 628 chr2L 18666783 18666837 chr2L 18669937 18669991 10 3154 48.0 38.0 43.0 0.2 3208 chr2L 18666783 intergenic CG43338 - chr2L 18668387 exon CG43338 - chr2L 18669991 intron CG43338 - chr2L_10_18665001 chr2L_18665001 D17-c3 629 chr2L 18670513 18670568 chr2L 18670838 18670876 10 319 19.5 23.0 21.2 0.5 363 chr2L 18670513 intron CG43338 - chr2L 18670694 intron CG43338 - chr2L 18670876 intron CG43338 - chr2L_10_18670001 chr2L_18670001 D17-c3 630 chr2L 18745119 18745168 chr2L 18745231 18745280 17 110 16.0 19.5 17.8 0.9 161 chr2L 18745119 intergenic not near genes chr2L 18745200 intergenic not near genes chr2L 18745280 intergenic not near genes chr2L_17_18745001 chr2L_18745001 D17-c3 631 chr2L 18766218 18766441 chr2L 18766327 18766587 8 113 22.5 24.0 23.2 0.3 369 chr2L 18766218 intron ham - chr2L 18766402 intron ham - chr2L 18766587 intron ham - chr2L_8_18765001 chr2L_18765001 D17-c3 632 chr2L 18811412 18811431 chr2L 18811519 18811537 4 106 7.5 1.5 4.5 0.7 125 chr2L 18811412 intergenic CG10570 -,CG42502 - chr2L 18811474 intergenic CG10570 -,CG42502 - chr2L 18811537 intergenic not near genes chr2L_4_18810001 chr2L_18810001 D17-c3 633 chr2L 18812537 18812590 chr2L 18812825 18812878 16 288 11.0 17.5 14.2 1.1 341 chr2L 18812537 intergenic CG17325 +,CG42305 + chr2L 18812708 5` UTR,5` UTR CG17325 +,CG42305 + chr2L 18812878 5` UTR,5` UTR CG17325 +,CG42305 + chr2L_16_18810001 chr2L_18810001 D17-c3 634 chr2L 18816024 18816054 chr2L 18816263 18816293 4 239 14.0 10.0 12.0 0.3 269 chr2L 18816024 intergenic not near genes chr2L 18816158 intergenic not near genes chr2L 18816293 intergenic not near genes chr2L_4_18815001 chr2L_18815001 D17-c3 635 chr2L 18816839 18816894 chr2L 18817019 18817074 9 181 38.0 35.0 36.5 0.2 235 chr2L 18816839 intergenic not near genes chr2L 18816956 intergenic not near genes chr2L 18817074 intergenic not near genes chr2L_9_18815001 chr2L_18815001 D17-c3 636 chr2L 18833690 18833722 chr2L 18833851 18833883 8 160 11.0 14.0 12.5 0.6 193 chr2L 18833690 intergenic CG10600 -,ScpX + chr2L 18833786 3` UTR CG10600 - chr2L 18833883 3` UTR CG10600 - chr2L_8_18830001 chr2L_18830001 D17-c3 637 chr2L 18872922 18872980 chr2L 18873033 18873091 18 109 22.0 21.5 21.8 0.8 169 chr2L 18872922 intron tup - chr2L 18873006 intron tup - chr2L 18873091 intron tup - chr2L_18_18870001 chr2L_18870001 D17-c3 638 chr2L 18883835 18883879 chr2L 18883942 18883986 17 106 6.5 6.0 6.2 2.4 151 chr2L 18883835 intergenic not near genes chr2L 18883910 intergenic not near genes chr2L 18883986 intergenic not near genes chr2L_17_18880001 chr2L_18880001 D17-c3 639 chr2L 18898373 18898376 chr2L 18898480 18898483 4 107 20.5 2.0 11.2 0.3 110 chr2L 18898373 intergenic not near genes chr2L 18898428 intergenic not near genes chr2L 18898483 intergenic not near genes chr2L_4_18895001 chr2L_18895001 D17-c3 640 chr2L 18898381 18898427 chr2L 18898477 18898534 22 106 8.5 2.0 5.2 3.5 153 chr2L 18898381 intergenic not near genes chr2L 18898458 intergenic not near genes chr2L 18898534 intergenic not near genes chr2L_22_18895001 chr2L_18895001 D17-c3 641 chr2L 18904549 18904583 chr2L 18904700 18904734 8 151 8.5 1.5 5.0 1.3 185 chr2L 18904549 intergenic not near genes chr2L 18904642 intergenic not near genes chr2L 18904734 intergenic not near genes chr2L_8_18900001 chr2L_18900001 D17-c3 642 chr2L 18913405 18913459 chr2L 18913516 18913570 11 108 19.0 19.5 19.2 0.5 165 chr2L 18913405 intergenic not near genes chr2L 18913488 intergenic not near genes chr2L 18913570 intergenic not near genes chr2L_11_18910001 chr2L_18910001 D17-c3 643 chr2L 19024096 19024097 chr2L 21768291 21768291 14 2744194 53.5 41.5 47.5 0.3 2744195 chr2L 19024096 3` UTR CR43700 - chr2L 20396194 intron CG10947 - chr2L 21768291 intron CG31612 - chr2L_14_20395001 chr2L_20395001 D17-c3 644 chr2L 19070241 19070295 chr2L 19070359 19070413 22 117 10.5 5.5 8.0 2.4 172 chr2L 19070241 intergenic CG10702 - chr2L 19070327 intergenic CG10702 - chr2L 19070413 intergenic not near genes chr2L_22_19070001 chr2L_19070001 D17-c3 645 chr2L 19101473 19101528 chr2L 19101616 19101671 17 152 58.0 55.5 56.8 0.3 198 chr2L 19101473 intron Lim3 - chr2L 19101572 intron Lim3 - chr2L 19101671 intron Lim3 - chr2L_17_19100001 chr2L_19100001 D17-c3 646 chr2L 19147361 19147398 chr2L 19154421 19154458 297 9 7060 3.0 11.0 7.0 1.1 7097 chr2L 19147361 intron brat + chr2L 19150910 intron brat + chr2L 19154458 intron brat + chr2L_9_19150001 chr2L_19150001 D17-c3 647 chr2L 19214564 19214612 chr2L 19214670 19214718 22 104 9.5 6.5 8.0 2.4 154 chr2L 19214564 intergenic not near genes chr2L 19214641 intergenic not near genes chr2L 19214718 intergenic not near genes chr2L_22_19210001 chr2L_19210001 D17-c3 648 chr2L 19246814 19246839 chr2L 19246917 19246942 6 103 6.5 3.5 5.0 1.0 128 chr2L 19246814 intergenic not near genes chr2L 19246878 intergenic not near genes chr2L 19246942 intergenic not near genes chr2L_6_19245001 chr2L_19245001 D17-c3 649 chr2L 19305588 19305627 chr2L 19305719 19305758 13 131 4.0 5.5 4.8 2.2 170 chr2L 19305588 intergenic not near genes chr2L 19305673 intergenic not near genes chr2L 19305758 intergenic not near genes chr2L_13_19305001 chr2L_19305001 D17-c3 650 chr2L 19308932 19308986 chr2L 19309043 19309097 19 110 12.0 10.0 11.0 1.6 165 chr2L 19308932 intergenic not near genes chr2L 19309014 intergenic not near genes chr2L 19309097 intergenic not near genes chr2L_19_19305001 chr2L_19305001 D17-c3 651 chr2L 19309597 19309648 chr2L 19309702 19309753 29 105 9.5 4.5 7.0 3.6 156 chr2L 19309597 intergenic not near genes chr2L 19309675 intergenic not near genes chr2L 19309753 intergenic not near genes chr2L_29_19305001 chr2L_19305001 D17-c3 652 chr2L 19316169 19316228 chr2L 19316271 19316330 9 102 7.0 2.5 4.8 1.6 161 chr2L 19316169 intergenic not near genes chr2L 19316250 intergenic not near genes chr2L 19316330 intergenic not near genes chr2L_9_19315001 chr2L_19315001 D17-c3 653 chr2L 19344992 19345004 chr2L 19357226 19357227 blood 6 12231 12.0 8.0 10.0 0.5 12235 chr2L 19344992 intron dnt - chr2L 19351110 intron dnt - chr2L 19357227 intron dnt - chr2L_6_19350001 chr2L_19350001 D17-c3 654 chr2L 19345005 19345033 chr2L 19357224 19357267 blood 15 12232 7.0 8.0 7.5 1.8 12262 chr2L 19345005 intron dnt - chr2L 19351136 intron dnt - chr2L 19357267 intron dnt - chr2L_15_19350001 chr2L_19350001 D17-c3 655 chr2L 19357523 19357568 chr2L 19357638 19357683 23 112 9.0 10.5 9.8 2.1 160 chr2L 19357523 intron dnt - chr2L 19357603 intron dnt - chr2L 19357683 intron dnt - chr2L_23_19355001 chr2L_19355001 D17-c3 656 chr2L 19380481 19380529 chr2L 19380586 19380634 23 103 10.0 6.5 8.2 2.5 153 chr2L 19380481 intergenic CG17350 + chr2L 19380558 intergenic CG17350 + chr2L 19380634 intergenic CG17350 + chr2L_23_19380001 chr2L_19380001 D17-c3 657 chr2L 19383976 19384022 chr2L 19384096 19384129 30 122 13.0 15.5 14.2 2.0 153 chr2L 19383976 exon fon - chr2L 19384052 exon fon - chr2L 19384129 exon fon - chr2L_30_19380001 chr2L_19380001 D17-c3 658 chr2L 19393939 19393992 chr2L 19394078 19394131 26 139 7.5 0.5 4.0 5.2 192 chr2L 19393939 intron CG17544 - chr2L 19394035 intron CG17544 - chr2L 19394131 intron CG17544 - chr2L_26_19390001 chr2L_19390001 D17-c3 659 chr2L 19405592 19405641 chr2L 19405707 19405756 14 114 2.5 4.0 3.2 3.3 164 chr2L 19405592 intron Pax - chr2L 19405674 intron Pax - chr2L 19405756 intron Pax - chr2L_14_19405001 chr2L_19405001 D17-c3 660 chr2L 19437497 19437528 chr2L 19437614 19437645 10 117 23.5 27.5 25.5 0.4 148 chr2L 19437497 intron CG10237 - chr2L 19437571 intron CG10237 - chr2L 19437645 intron CG10237 - chr2L_10_19435001 chr2L_19435001 D17-c3 661 chr2L 19489628 19489672 chr2L 19490438 19490483 12 806 56.5 19.0 37.8 0.3 855 chr2L 19489628 exon CG10194 - chr2L 19490056 exon CG10194 - chr2L 19490483 5` UTR CG18094 + chr2L_12_19490001 chr2L_19490001 D17-c3 662 chr2L 19550253 19550292 chr2L 19550429 19550469 7 177 12.0 13.5 12.8 0.5 216 chr2L 19550253 intron Tep4 + chr2L 19550361 intron Tep4 + chr2L 19550469 intron Tep4 + chr2L_7_19550001 chr2L_19550001 D17-c3 663 chr2L 19557808 19557827 chr2L 19557917 19557944 9 112 9.5 7.5 8.5 0.9 136 chr2L 19557808 intergenic Tep5 + chr2L 19557876 intergenic Tep5 + chr2L 19557944 intergenic Tep5 + chr2L_9_19555001 chr2L_19555001 D17-c3 664 chr2L 19558497 19558545 chr2L 19558626 19558674 7 129 11.0 11.5 11.2 0.6 177 chr2L 19558497 intron Tep5 + chr2L 19558586 intron Tep5 + chr2L 19558674 intron Tep5 + chr2L_7_19555001 chr2L_19555001 D17-c3 665 chr2L 19559991 19560035 chr2L 19560269 19560312 6 277 18.0 29.5 23.8 0.2 321 chr2L 19559991 exon Tep5 + chr2L 19560152 exon Tep5 + chr2L 19560312 intron Tep5 + chr2L_6_19560001 chr2L_19560001 D17-c3 666 chr2L 19561316 19561364 chr2L 19561484 19561530 9 167 19.0 18.0 18.5 0.5 214 chr2L 19561316 exon Tep5 + chr2L 19561423 exon Tep5 + chr2L 19561530 exon Tep5 + chr2L_9_19560001 chr2L_19560001 D17-c3 667 chr2L 19562504 19562555 chr2L 19562609 19562658 8 105 23.0 23.0 23.0 0.3 154 chr2L 19562504 exon Tep5 + chr2L 19562581 intron Tep5 + chr2L 19562658 exon Tep5 + chr2L_8_19560001 chr2L_19560001 D17-c3 668 chr2L 19601554 19601601 chr2L 19601648 19601703 13 99 6.5 9.5 8.0 1.4 149 chr2L 19601554 intron,intron Lar +,CR44978 - chr2L 19601628 intron,intron Lar +,CR44978 - chr2L 19601703 intron,intron Lar +,CR44978 - chr2L_13_19600001 chr2L_19600001 D17-c3 669 chr2L 19620074 19620130 chr2L 19621088 19621128 jockey 35 1012 6.5 5.0 5.8 5.1 1054 chr2L 19620074 intron Lar + chr2L 19620601 intron Lar + chr2L 19621128 intron Lar + chr2L_35_19620001 chr2L_19620001 D17-c3 670 chr2L 19652550 19652599 chr2L 19674011 19674060 opus 17 21455 6.0 6.5 6.2 2.4 21510 chr2L 19652550 intron Lar + chr2L 19663305 intron Lar + chr2L 19674060 intron Lar + chr2L_17_19660001 chr2L_19660001 D17-c3 671 chr2L 19683338 19683389 chr2L 19683817 19683868 10 479 22.5 18.5 20.5 0.5 530 chr2L 19683338 intron Lar + chr2L 19683603 intron Lar + chr2L 19683868 intron Lar + chr2L_10_19680001 chr2L_19680001 D17-c3 672 chr2L 19703515 19703566 chr2L 19712676 19712727 roo 24 9160 6.0 11.0 8.5 2.5 9212 chr2L 19703515 intron Lar + chr2L 19708121 intron Lar + chr2L 19712727 intron Lar + chr2L_24_19705001 chr2L_19705001 D17-c3 673 chr2L 19718503 19718515 chr2L 19718616 19718628 6 113 11.0 19.0 15.0 0.4 125 chr2L 19718503 intron Lar + chr2L 19718566 intron Lar + chr2L 19718628 intron Lar + chr2L_6_19715001 chr2L_19715001 D17-c3 674 chr2L 19737333 19737389 chr2L 19740827 19740853 1360 14 3486 15.0 14.5 14.8 0.9 3520 chr2L 19737333 intergenic Nf-YB + chr2L 19739093 intergenic not near genes chr2L 19740853 intergenic not near genes chr2L_14_19735001 chr2L_19735001 D17-c3 675 chr2L 19742342 19742386 chr2L 19742452 19742496 11 109 24.0 19.0 21.5 0.5 154 chr2L 19742342 intergenic CG10631 - chr2L 19742419 intergenic CG10631 - chr2L 19742496 intergenic CG10631 - chr2L_11_19740001 chr2L_19740001 D17-c3 676 chr2L 19762782 19762836 chr2L 19763049 19763103 pogo 13 267 10.0 5.0 7.5 1.5 321 chr2L 19762782 exon fbp - chr2L 19762942 intron fbp - chr2L 19763103 intron fbp - chr2L_13_19760001 chr2L_19760001 D17-c3 677 chr2L 19773137 19773186 chr2L 19773249 19773298 17 112 3.5 4.5 4.0 3.4 161 chr2L 19773137 intergenic not near genes chr2L 19773218 intergenic not near genes chr2L 19773298 intergenic not near genes chr2L_17_19770001 chr2L_19770001 D17-c3 678 chr2L 19776637 19776659 chr2L 19776742 19776764 12 105 11.5 7.5 9.5 1.1 127 chr2L 19776637 3` UTR CdGAPr - chr2L 19776700 3` UTR CdGAPr - chr2L 19776764 3` UTR CdGAPr - chr2L_12_19775001 chr2L_19775001 D17-c3 679 chr2L 19778533 19778585 chr2L 19778638 19778687 18 104 28.0 32.0 30.0 0.6 154 chr2L 19778533 exon CdGAPr - chr2L 19778610 exon CdGAPr - chr2L 19778687 exon CdGAPr - chr2L_18_19775001 chr2L_19775001 D17-c3 680 chr2L 19823241 19823290 chr2L 19823347 19823404 6 111 18.0 15.0 16.5 0.3 163 chr2L 19823241 intron sick + chr2L 19823322 intron sick + chr2L 19823404 intron sick + chr2L_6_19820001 chr2L_19820001 D17-c3 681 chr2L 19870395 19870448 chr2L 19870908 19870961 12 512 12.5 23.5 18.0 0.6 566 chr2L 19870395 intron sick + chr2L 19870678 intron sick + chr2L 19870961 intron sick + chr2L_12_19870001 chr2L_19870001 D17-c3 682 chr2L 19911263 19911319 chr2L 19911376 19911432 27 113 26.5 25.0 25.8 1.0 169 chr2L 19911263 intron,3` UTR sick +,CR43097 - chr2L 19911348 intron,3` UTR sick +,CR43097 - chr2L 19911432 intron,3` UTR sick +,CR43097 - chr2L_27_19910001 chr2L_19910001 D17-c3 683 chr2L 19913045 19913080 chr2L 19913516 19913551 6 471 15.5 5.5 10.5 0.5 506 chr2L 19913045 intron,3` UTR sick +,Victoria - chr2L 19913298 intron,exon sick +,Victoria - chr2L 19913551 intron sick + chr2L_6_19910001 chr2L_19910001 D17-c3 684 chr2L 19950188 19950196 chr2L 19950295 19950303 5 107 11.0 14.0 12.5 0.4 115 chr2L 19950188 intron sick + chr2L 19950246 intron sick + chr2L 19950303 intron sick + chr2L_5_19950001 chr2L_19950001 D17-c3 685 chr2L 20005850 20005905 chr2L 20010950 20011006 flea 22 5100 6.0 6.5 6.2 3.1 5156 chr2L 20005850 intron CG43861 - chr2L 20008428 intron CG43861 - chr2L 20011006 intron CG43861 - chr2L_22_20005001 chr2L_20005001 D17-c3 686 chr2L 20041406 20041460 chr2L 20041516 20041570 21 107 23.5 22.0 22.8 0.9 164 chr2L 20041406 intron sNPF + chr2L 20041488 intron sNPF + chr2L 20041570 intron sNPF + chr2L_21_20040001 chr2L_20040001 D17-c3 687 chr2L 20079499 20079545 chr2L 20079645 20079686 11 145 10.5 11.5 11.0 0.9 187 chr2L 20079499 intron,intron neb +,fok - chr2L 20079592 intron,intron neb +,fok - chr2L 20079686 intron,intron neb +,fok - chr2L_11_20075001 chr2L_20075001 D17-c3 688 chr2L 20079879 20079900 chr2L 20080002 20080048 4 142 9.5 10.5 10.0 0.4 169 chr2L 20079879 intron,intron neb +,fok - chr2L 20079964 intron,intron neb +,fok - chr2L 20080048 intron,intron neb +,fok - chr2L_4_20075001 chr2L_20075001 D17-c3 689 chr2L 20124304 20124356 chr2L 20124407 20124459 4 103 10.0 14.5 12.2 0.3 155 chr2L 20124304 intergenic not near genes chr2L 20124382 intergenic not near genes chr2L 20124459 intergenic not near genes chr2L_4_20120001 chr2L_20120001 D17-c3 690 chr2L 20272090 20272135 chr2L 20282826 20282871 copia 23 10736 8.5 6.0 7.2 2.8 10781 chr2L 20272090 intergenic not near genes chr2L 20277480 intergenic not near genes chr2L 20282871 intergenic not near genes chr2L_23_20275001 chr2L_20275001 D17-c3 691 chr2L 20287165 20287189 chr2L 20287572 20287595 8 407 15.0 24.0 19.5 0.4 430 chr2L 20287165 intergenic not near genes chr2L 20287380 intergenic not near genes chr2L 20287595 intergenic not near genes chr2L_8_20285001 chr2L_20285001 D17-c3 692 chr2L 20294281 20294333 chr2L 20294395 20294447 6 114 10.5 10.5 10.5 0.5 166 chr2L 20294281 intergenic CG12617 + chr2L 20294364 intergenic CG12617 + chr2L 20294447 intergenic CG12617 + chr2L_6_20290001 chr2L_20290001 D17-c3 693 chr2L 20296498 20296539 chr2L 20296604 20296645 16 105 1.5 6.5 4.0 3.2 147 chr2L 20296498 intergenic CR43414 - chr2L 20296572 intergenic CR43414 - chr2L 20296645 3` UTR CR43414 - chr2L_16_20295001 chr2L_20295001 D17-c3 694 chr2L 20299976 20300011 chr2L 20300089 20300114 8 109 22.0 27.5 24.8 0.3 138 chr2L 20299976 intergenic not near genes chr2L 20300045 intergenic not near genes chr2L 20300114 intergenic not near genes chr2L_8_20300001 chr2L_20300001 D17-c3 695 chr2L 20303160 20303187 chr2L 20310653 20310680 blood 10 7493 8.5 3.0 5.8 1.5 7520 chr2L 20303160 intergenic not near genes chr2L 20306920 intergenic not near genes chr2L 20310680 intergenic not near genes chr2L_10_20305001 chr2L_20305001 D17-c3 696 chr2L 20320015 20320055 chr2L 20320144 20320199 4 136 19.0 13.5 16.2 0.2 184 chr2L 20320015 intron spir + chr2L 20320107 intron spir + chr2L 20320199 intron spir + chr2L_4_20320001 chr2L_20320001 D17-c3 697 chr2L 20322609 20322668 chr2L 20322717 20322776 9 108 21.0 22.5 21.8 0.4 167 chr2L 20322609 intron spir + chr2L 20322692 intron spir + chr2L 20322776 intron spir + chr2L_9_20320001 chr2L_20320001 D17-c3 698 chr2L 20372204 20372243 chr2L 20372470 20372509 pogo 17 266 2.0 9.0 5.5 2.6 305 chr2L 20372204 intergenic Ugt37a1 - chr2L 20372356 intergenic Ugt37a1 - chr2L 20372509 exon Ugt37a1 - chr2L_17_20370001 chr2L_20370001 D17-c3 699 chr2L 20396779 20396812 chr2L 20396880 20396912 6 98 25.5 21.5 23.5 0.2 133 chr2L 20396779 intron CG10947 - chr2L 20396846 intron CG10947 - chr2L 20396912 intron CG10947 - chr2L_6_20395001 chr2L_20395001 D17-c3 700 chr2L 20498663 20498708 chr2L 20498787 20498832 21 124 9.5 9.0 9.2 2.1 169 chr2L 20498663 intergenic not near genes chr2L 20498748 intergenic not near genes chr2L 20498832 intergenic not near genes chr2L_21_20495001 chr2L_20495001 D17-c3 701 chr2L 20532005 20532058 chr2L 20532117 20532170 6 112 18.0 18.0 18.0 0.3 165 chr2L 20532005 intergenic CG44270 + chr2L 20532088 intergenic CG44270 + chr2L 20532170 intergenic CG44270 + chr2L_6_20530001 chr2L_20530001 D17-c3 702 chr2L 20568635 20568687 chr2L 20569050 20569101 X-element 23 414 4.0 4.5 4.2 4.4 466 chr2L 20568635 intron CR45347 + chr2L 20568868 intron CR45347 + chr2L 20569101 intron CR45347 + chr2L_23_20565001 chr2L_20565001 D17-c3 703 chr2L 20576202 20576249 chr2L 20583695 20583743 blood 15 7493 3.5 4.5 4.0 3.0 7541 chr2L 20576202 intergenic CR45347 + chr2L 20579972 intergenic not near genes chr2L 20583743 3` UTR CR44909 - chr2L_15_20575001 chr2L_20575001 D17-c3 704 chr2L 20601760 20601813 chr2L 20601863 20601916 10 103 11.0 9.5 10.2 0.9 156 chr2L 20601760 intron CR44909 - chr2L 20601838 intron CR44909 - chr2L 20601916 intron CR44909 - chr2L_10_20600001 chr2L_20600001 D17-c3 705 chr2L 20611235 20611264 chr2L 20611349 20611378 8 114 14.5 13.5 14.0 0.5 143 chr2L 20611235 intron CR44909 - chr2L 20611306 intron CR44909 - chr2L 20611378 intron CR44909 - chr2L_8_20610001 chr2L_20610001 D17-c3 706 chr2L 20623918 20623938 chr2L 20624022 20624042 5 104 22.0 23.5 22.8 0.2 124 chr2L 20623918 intron CR44909 - chr2L 20623980 intron CR44909 - chr2L 20624042 intron CR44909 - chr2L_5_20620001 chr2L_20620001 D17-c3 707 chr2L 20639483 20639524 chr2L 20639784 20639825 INE-1 6 301 20.5 14.5 17.5 0.3 342 chr2L 20639483 intergenic not near genes chr2L 20639654 intergenic CG31680 + chr2L 20639825 intergenic CG31680 + chr2L_6_20635001 chr2L_20635001 D17-c3 708 chr2L 20643318 20643339 chr2L 20643475 20643496 13 155 6.0 10.5 8.2 1.4 178 chr2L 20643318 intergenic phr6-4 -,CG17470 - chr2L 20643407 3` UTR phr6-4 - chr2L 20643496 3` UTR phr6-4 - chr2L_13_20640001 chr2L_20640001 D17-c3 709 chr2L 20668670 20668718 chr2L 20668770 20668819 13 101 17.5 17.0 17.2 0.7 149 chr2L 20668670 intron CG31678 - chr2L 20668744 intron CG31678 - chr2L 20668819 intron CG31678 - chr2L_13_20665001 chr2L_20665001 D17-c3 710 chr2L 20673977 20674016 chr2L 20674488 20674526 8 510 24.0 16.5 20.2 0.4 549 chr2L 20673977 intron CG31678 - chr2L 20674252 intron CG31678 - chr2L 20674526 intron CG31678 - chr2L_8_20670001 chr2L_20670001 D17-c3 711 chr2L 20674805 20674863 chr2L 20674915 20674966 12 105 6.0 0.0 3.0 3.0 161 chr2L 20674805 intron CG31678 - chr2L 20674886 intron CG31678 - chr2L 20674966 intron CG31678 - chr2L_12_20670001 chr2L_20670001 D17-c3 712 chr2L 20695775 20695829 chr2L 20695882 20695942 19 113 21.0 15.5 18.2 1.0 167 chr2L 20695775 intron Hr38 - chr2L 20695858 intron Hr38 - chr2L 20695942 intron Hr38 - chr2L_19_20695001 chr2L_20695001 D17-c3 713 chr2L 20711661 20711715 chr2L 20711776 20711808 13 113 19.0 17.5 18.2 0.7 147 chr2L 20711661 intron,5` UTR Hr38 -,CR44188 + chr2L 20711734 intron,5` UTR Hr38 -,CR44188 + chr2L 20711808 intron,5` UTR Hr38 -,CR44188 + chr2L_13_20710001 chr2L_20710001 D17-c3 714 chr2L 20801660 20801680 chr2L 20801764 20801781 6 102 10.0 12.0 11.0 0.5 121 chr2L 20801660 intron CG9328 + chr2L 20801720 intron CG9328 + chr2L 20801781 intron CG9328 + chr2L_6_20800001 chr2L_20800001 D17-c3 715 chr2L 20819091 20819124 chr2L 20819200 20819233 7 109 19.5 16.5 18.0 0.4 142 chr2L 20819091 intergenic not near genes chr2L 20819162 intergenic not near genes chr2L 20819233 intergenic not near genes chr2L_7_20815001 chr2L_20815001 D17-c3 716 chr2L 20821476 20821521 chr2L 20821648 20821699 15 174 30.0 39.0 34.5 0.4 223 chr2L 20821476 intergenic not near genes chr2L 20821588 intergenic not near genes chr2L 20821699 intergenic not near genes chr2L_15_20820001 chr2L_20820001 D17-c3 717 chr2L 20826506 20826546 chr2L 20826611 20826651 15 105 22.5 24.5 23.5 0.6 145 chr2L 20826506 intron CG9331 + chr2L 20826578 intron CG9331 + chr2L 20826651 exon CG9331 + chr2L_15_20825001 chr2L_20825001 D17-c3 718 chr2L 20835788 20835840 chr2L 20836530 20836582 Quasimodo 10 741 10.5 12.5 11.5 0.8 794 chr2L 20835788 5` UTR Oseg5 - chr2L 20836185 intergenic Oseg5 -,Spn38F - chr2L 20836582 intergenic Spn38F - chr2L_10_20835001 chr2L_20835001 D17-c3 719 chr2L 20840002 20840058 chr2L 20840239 20840295 31 237 5.0 7.5 6.2 4.3 293 chr2L 20840002 intergenic not near genes chr2L 20840148 intergenic not near genes chr2L 20840295 intergenic CG31676 + chr2L_31_20840001 chr2L_20840001 D17-c3 720 chr2L 20891512 20891546 chr2L 20896638 20896672 jockey 8 5126 3.5 7.0 5.2 1.3 5160 chr2L 20891512 intron,intron CG43739 -,sky - chr2L 20894092 intron,intron CG43739 -,sky - chr2L 20896672 intron,intron CG43739 -,sky - chr2L_8_20890001 chr2L_20890001 D17-c3 721 chr2L 20901428 20901438 chr2L 20902617 20902627 1360 6 1189 18.5 3.0 10.8 0.5 1199 chr2L 20901428 intron,intron CG43739 -,sky - chr2L 20902028 intron,intron CG43739 -,sky - chr2L 20902627 intron,intron CG43739 -,sky - chr2L_6_20900001 chr2L_20900001 D17-c3 722 chr2L 20911002 20911060 chr2L 20911103 20911161 27 100 29.0 29.0 29.0 0.9 159 chr2L 20911002 intron,intron CG43739 -,sky - chr2L 20911082 intron,intron CG43739 -,sky - chr2L 20911161 intron,intron CG43739 -,sky - chr2L_27_20910001 chr2L_20910001 D17-c3 723 chr2L 20934584 20934633 chr2L 20934804 20934853 11 220 10.5 13.0 11.8 0.9 269 chr2L 20934584 intergenic CG9270 - chr2L 20934718 intergenic not near genes chr2L 20934853 intergenic not near genes chr2L_11_20930001 chr2L_20930001 D17-c3 724 chr2L 20946920 20946960 chr2L 20947032 20947072 26 104 8.0 6.0 7.0 3.2 152 chr2L 20946920 intergenic CR44606 - chr2L 20946996 intergenic CR44606 - chr2L 20947072 intergenic CR44606 - chr2L_26_20945001 chr2L_20945001 D17-c3 725 chr2L 20967057 20967105 chr2L 20967168 20967216 26 110 4.5 7.5 6.0 3.7 159 chr2L 20967057 3` UTR CG42238 - chr2L 20967136 3` UTR CG42238 - chr2L 20967216 3` UTR CG42238 - chr2L_26_20965001 chr2L_20965001 D17-c3 726 chr2L 20976630 20976661 chr2L 20981470 20981501 X-element 17 4840 7.5 10.0 8.8 1.7 4871 chr2L 20976630 intron CG42238 - chr2L 20979066 intron CG42238 - chr2L 20981501 intron CG42238 - chr2L_17_20975001 chr2L_20975001 D17-c3 727 chr2L 20984384 20984426 chr2L 20984695 20984737 11 311 9.5 18.0 13.8 0.7 353 chr2L 20984384 intron CG42238 - chr2L 20984560 intron CG42238 - chr2L 20984737 intron CG42238 - chr2L_11_20980001 chr2L_20980001 D17-c3 728 chr2L 20991013 20991029 chr2L 20991116 20991132 6 103 13.5 8.0 10.8 0.5 119 chr2L 20991013 intron CG42238 - chr2L 20991072 intron CG42238 - chr2L 20991132 intron CG42238 - chr2L_6_20990001 chr2L_20990001 D17-c3 729 chr2L 20991031 20991065 chr2L 20991114 20991168 16 100 9.5 8.0 8.8 1.6 137 chr2L 20991031 intron CG42238 - chr2L 20991100 intron CG42238 - chr2L 20991168 intron CG42238 - chr2L_16_20990001 chr2L_20990001 D17-c3 730 chr2L 21020252 21020302 chr2L 21023954 21024004 NOF 20 3702 4.0 12.0 8.0 2.2 3752 chr2L 21020252 intron CG42238 - chr2L 21022128 intron CG42238 - chr2L 21024004 intron CG42238 - chr2L_20_21020001 chr2L_21020001 D17-c3 731 chr2L 21041114 21041166 chr2L 21049400 21049452 Tirant 20 8286 4.0 5.5 4.8 3.4 8338 chr2L 21041114 intron CG42238 - chr2L 21045283 intron CG42238 - chr2L 21049452 intron CG42238 - chr2L_20_21045001 chr2L_21045001 D17-c3 732 chr2L 21074899 21074949 chr2L 21075015 21075055 16 115 2.5 2.5 2.5 4.6 156 chr2L 21074899 intergenic not near genes chr2L 21074977 intergenic tadr + chr2L 21075055 intergenic tadr + chr2L_16_21070001 chr2L_21070001 D17-c3 733 chr2L 21086422 21086456 chr2L 21086562 21086596 12 138 9.5 9.0 9.2 1.2 174 chr2L 21086422 5` UTR CG33509 - chr2L 21086509 intergenic CG33509 -,ppk13 - chr2L 21086596 intergenic CG33509 -,ppk13 - chr2L_12_21085001 chr2L_21085001 D17-c3 734 chr2L 21088897 21088948 chr2L 21089005 21089056 19 108 9.5 3.5 6.5 2.5 159 chr2L 21088897 intergenic ppk13 -,CG9259 + chr2L 21088976 intergenic ppk13 -,CG9259 + chr2L 21089056 intergenic ppk13 -,CG9259 + chr2L_19_21085001 chr2L_21085001 D17-c3 735 chr2L 21158869 21158909 chr2L 21158971 21159011 9 102 23.5 22.0 22.8 0.4 142 chr2L 21158869 intergenic CG9248 +,CG9249 - chr2L 21158940 5` UTR CG9248 + chr2L 21159011 exon CG9248 + chr2L_9_21155001 chr2L_21155001 D17-c3 736 chr2L 21179193 21179237 chr2L 21179297 21179343 9 105 23.0 23.5 23.2 0.4 150 chr2L 21179193 intron,5` UTR bur -,CR44911 + chr2L 21179268 intron,5` UTR bur -,CR44911 + chr2L 21179343 5` UTR,5` UTR bur -,CR44911 + chr2L_9_21175001 chr2L_21175001 D17-c3 737 chr2L 21347532 21347574 chr2L 21355029 21355071 blood 10 7497 5.0 3.5 4.2 1.9 7539 chr2L 21347532 intron Tsp39D + chr2L 21351302 intron Tsp39D + chr2L 21355071 intron Tsp39D + chr2L_10_21350001 chr2L_21350001 D17-c3 738 chr2L 21355585 21355638 chr2L 21355755 21355808 8 170 2.5 2.0 2.2 2.5 223 chr2L 21355585 exon Tsp39D + chr2L 21355696 intron Tsp39D + chr2L 21355808 intron Tsp39D + chr2L_8_21355001 chr2L_21355001 D17-c3 739 chr2L 21394361 21394398 chr2L 21394465 21394502 14 103 29.0 25.0 27.0 0.5 141 chr2L 21394361 intergenic not near genes chr2L 21394432 intergenic not near genes chr2L 21394502 intergenic not near genes chr2L_14_21390001 chr2L_21390001 D17-c3 740 chr2L 21597024 21597059 chr2L 21604793 21604828 roo 10 7769 3.5 11.0 7.2 1.2 7804 chr2L 21597024 intergenic not near genes chr2L 21600926 intergenic not near genes chr2L 21604828 intergenic not near genes chr2L_10_21600001 chr2L_21600001 D17-c3 741 chr2L 21612538 21612592 chr2L 21612683 21612737 15 142 18.0 24.0 21.0 0.7 199 chr2L 21612538 intergenic not near genes chr2L 21612638 intergenic not near genes chr2L 21612737 intergenic not near genes chr2L_15_21610001 chr2L_21610001 D17-c3 742 chr2L 21691802 21691833 chr2L 21698297 21698328 Burdock 6 6495 7.5 1.0 4.2 1.2 6526 chr2L 21691802 intron CG31619 + chr2L 21695065 intron CG31619 + chr2L 21698328 intron CG31619 + chr2L_6_21695001 chr2L_21695001 D17-c3 743 chr2L 21754636 21754680 chr2L 21754742 21754786 6 105 12.0 7.0 9.5 0.6 150 chr2L 21754636 intron step - chr2L 21754711 intron step - chr2L 21754786 intron step - chr2L_6_21750001 chr2L_21750001 D17-c3 744 chr2L 21755471 21755520 chr2L 21755620 21755668 10 147 9.0 12.0 10.5 0.9 197 chr2L 21755471 intron step - chr2L 21755570 intron step - chr2L 21755668 intron step - chr2L_10_21755001 chr2L_21755001 D17-c3 745 chr2L 21757557 21757597 chr2L 21757663 21757703 5 106 14.0 16.0 15.0 0.3 146 chr2L 21757557 intergenic step -,CG1416 + chr2L 21757630 intergenic step -,CG1416 + chr2L 21757703 intergenic step -,CG1416 + chr2L_5_21755001 chr2L_21755001 D17-c3 746 chr2L 21788721 21788757 chr2L 21788824 21788860 4 103 14.0 13.0 13.5 0.3 139 chr2L 21788721 intron CG31612 - chr2L 21788790 intron CG31612 - chr2L 21788860 intron CG31612 - chr2L_4_21785001 chr2L_21785001 D17-c3 747 chr2L 21806224 21806254 chr2L 21806352 21806382 7 128 11.5 13.5 12.5 0.5 158 chr2L 21806224 intergenic not near genes chr2L 21806303 intergenic not near genes chr2L 21806382 intergenic not near genes chr2L_7_21805001 chr2L_21805001 D17-c3 748 chr2L 21808987 21809034 chr2L 21809218 21809265 13 230 19.5 27.0 23.2 0.5 278 chr2L 21808987 intergenic not near genes chr2L 21809126 intergenic not near genes chr2L 21809265 intergenic not near genes chr2L_13_21805001 chr2L_21805001 D17-c3 749 chr2L 21819304 21819359 chr2L 21819416 21819472 26 111 6.0 6.0 6.0 3.7 168 chr2L 21819304 intergenic CR44786 + chr2L 21819388 intergenic CR44786 + chr2L 21819472 intergenic CR44786 + chr2L_26_21815001 chr2L_21815001 D17-c3 750 chr2L 21855451 21855508 chr2L 21855561 21855619 15 111 7.0 3.0 5.0 2.5 168 chr2L 21855451 intron CR44917 + chr2L 21855535 intron CR44917 + chr2L 21855619 intron CR44917 + chr2L_15_21855001 chr2L_21855001 D17-c3 751 chr2L 21859294 21859353 chr2L 21859398 21859407 18 102 34.0 33.5 33.8 0.5 113 chr2L 21859294 intron CR44917 + chr2L 21859350 intron CR44917 + chr2L 21859407 intron CR44917 + chr2L_18_21855001 chr2L_21855001 D17-c3 752 chr2L 21895703 21895734 chr2L 21895805 21895835 5 102 19.5 11.0 15.2 0.3 132 chr2L 21895703 intergenic CR43762 + chr2L 21895769 intergenic CR43762 + chr2L 21895835 intergenic CR43762 + chr2L_5_21895001 chr2L_21895001 D17-c3 753 chr2L 21905056 21905096 chr2L 21905191 21905231 11 135 20.5 18.5 19.5 0.5 175 chr2L 21905056 intergenic not near genes chr2L 21905144 intergenic not near genes chr2L 21905231 intergenic not near genes chr2L_11_21905001 chr2L_21905001 D17-c3 754 chr2L 21905823 21905853 chr2L 21905954 21905984 6 131 10.0 14.0 12.0 0.5 161 chr2L 21905823 intergenic CG1428 + chr2L 21905904 intergenic CG1428 + chr2L 21905984 intergenic CG1428 + chr2L_6_21905001 chr2L_21905001 D17-c3 755 chr2L 21933905 21933923 chr2L 21934003 21934003 9 97 19.5 19.0 19.2 0.4 98 chr2L 21933905 intergenic not near genes chr2L 21933954 intergenic not near genes chr2L 21934003 intergenic not near genes chr2L_9_21930001 chr2L_21930001 D17-c3 756 chr2L 21954203 21954251 chr2L 21954308 21954356 9 105 28.5 33.0 30.8 0.3 153 chr2L 21954203 intergenic not near genes chr2L 21954280 intergenic not near genes chr2L 21954356 intergenic not near genes chr2L_9_21950001 chr2L_21950001 D17-c3 757 chr2L 21953799 21953835 chr2L 21954675 21954711 13 878 41.5 57.5 49.5 0.3 912 chr2L 21953799 intergenic not near genes chr2L 21954255 intergenic not near genes chr2L 21954711 intergenic not near genes chr2L_13_21950001 chr2L_21950001 D17-c3 758 chr2L 21981666 21981713 chr2L 21990853 21990888 roo 27 9187 7.0 10.5 8.8 2.8 9222 chr2L 21981666 exon CG2528 - chr2L 21986277 intron CG2528 - chr2L 21990888 exon CG2528 - chr2L_27_21985001 chr2L_21985001 D17-c3 759 chr2L 21996921 21996974 chr2L 21997027 21997080 7 106 8.5 12.5 10.5 0.6 159 chr2L 21996921 intergenic not near genes chr2L 21997000 intergenic not near genes chr2L 21997080 intergenic not near genes chr2L_7_21995001 chr2L_21995001 D17-c3 760 chr2L 22035952 22035997 chr2L 22036103 22036132 14 149 16.5 19.0 17.8 0.7 180 chr2L 22035952 intergenic not near genes chr2L 22036042 intergenic not near genes chr2L 22036132 intergenic not near genes chr2L_14_22035001 chr2L_22035001 D17-c3 761 chr2L 22047231 22047253 chr2L 22047381 22047403 10 150 5.5 10.0 7.8 1.1 172 chr2L 22047231 intergenic not near genes chr2L 22047317 intergenic not near genes chr2L 22047403 intergenic not near genes chr2L_10_22045001 chr2L_22045001 D17-c3 762 chr2L 22049636 22049644 chr2L 22049775 22049783 5 139 16.5 13.0 14.8 0.3 147 chr2L 22049636 intergenic not near genes chr2L 22049710 intergenic not near genes chr2L 22049783 intergenic not near genes chr2L_5_22045001 chr2L_22045001 D17-c3 763 chr2L 22073431 22073432 chr2L 22073538 22073540 4 108 12.5 16.0 14.2 0.3 109 chr2L 22073431 intergenic not near genes chr2L 22073486 intergenic not near genes chr2L 22073540 intergenic not near genes chr2L_4_22070001 chr2L_22070001 D17-c3 764 chr2L 22097077 22097128 chr2L 22097195 22097246 14 117 16.0 15.0 15.5 0.8 169 chr2L 22097077 intergenic not near genes chr2L 22097162 intergenic not near genes chr2L 22097246 intergenic not near genes chr2L_14_22095001 chr2L_22095001 D17-c3 765 chr2L 22148703 22148736 chr2L 22148809 22148842 13 106 19.0 21.5 20.2 0.6 139 chr2L 22148703 intron CG42748 + chr2L 22148772 intron CG42748 + chr2L 22148842 intron CG42748 + chr2L_13_22145001 chr2L_22145001 D17-c3 766 chr2L 22152832 22152871 chr2L 22152933 22152972 7 101 24.5 25.5 25.0 0.3 140 chr2L 22152832 intron CG42748 + chr2L 22152902 intron CG42748 + chr2L 22152972 intron CG42748 + chr2L_7_22150001 chr2L_22150001 D17-c3 767 chr2L 22191953 22192055 chr2L 22192057 22192169 11 123 13.5 10.5 12.0 0.8 216 chr2L 22191953 intron Ir40a - chr2L 22192061 intron Ir40a - chr2L 22192169 intron Ir40a - chr2L_11_22190001 chr2L_22190001 D17-c3 768 chr2L 22192372 22192424 chr2L 22192470 22192527 7 100 22.0 21.5 21.8 0.3 155 chr2L 22192372 intron Ir40a - chr2L 22192450 intron Ir40a - chr2L 22192527 intron Ir40a - chr2L_7_22190001 chr2L_22190001 D17-c3 769 chr2L 22197866 22197906 chr2L 22198090 22198129 6 224 10.5 12.0 11.2 0.5 263 chr2L 22197866 intron Ir40a - chr2L 22197998 intron Ir40a - chr2L 22198129 intron Ir40a - chr2L_6_22195001 chr2L_22195001 D17-c3 770 chr2L 22212117 22212155 chr2L 22212689 22212727 4 572 8.0 11.5 9.8 0.4 610 chr2L 22212117 intron Ir40a - chr2L 22212422 intron Ir40a - chr2L 22212727 exon Ir40a - chr2L_4_22210001 chr2L_22210001 D17-c3 771 chr2L 22215884 22215930 chr2L 22215995 22216041 16 111 3.5 7.0 5.2 2.6 157 chr2L 22215884 intergenic not near genes chr2L 22215962 intergenic not near genes chr2L 22216041 intergenic not near genes chr2L_16_22215001 chr2L_22215001 D17-c3 772 chr2L 22239403 22239457 chr2L 22239509 22239563 13 106 18.0 18.5 18.2 0.7 160 chr2L 22239403 intron CR43765 - chr2L 22239483 3` UTR CR43765 - chr2L 22239563 3` UTR CR43765 - chr2L_13_22235001 chr2L_22235001 D17-c3 773 chr2L 22258595 22258643 chr2L 22260744 22260792 G6 37 2149 7.5 11.5 9.5 3.5 2197 chr2L 22258595 intergenic Tif-IA + chr2L 22259694 intergenic not near genes chr2L 22260792 intergenic not near genes chr2L_37_22255001 chr2L_22255001 D17-c3 774 chr2L 22294333 22294385 chr2L 22294446 22294498 11 113 1.5 4.0 2.8 2.9 165 chr2L 22294333 intergenic not near genes chr2L 22294416 intergenic not near genes chr2L 22294498 intergenic not near genes chr2L_11_22290001 chr2L_22290001 D17-c3 775 chr2L 22318836 22318876 chr2L 22318940 22318980 10 103 2.0 2.0 2.0 3.3 144 chr2L 22318836 intron CG17018 + chr2L 22318908 intron CG17018 + chr2L 22318980 intron CG17018 + chr2L_10_22315001 chr2L_22315001 D17-c3 776 chr2L 22341267 22341296 chr2L 22341487 22341516 G-element 10 220 41.5 35.5 38.5 0.3 249 chr2L 22341267 intron CG17018 + chr2L 22341392 intron CG17018 + chr2L 22341516 intron CG17018 + chr2L_10_22340001 chr2L_22340001 D17-c3 777 chr2L 22548921 22548927 chr2L 22550171 22550176 1360 5 1250 13.0 25.0 19.0 0.2 1255 chr2L 22548921 intergenic CG17490 + chr2L 22549548 intergenic not near genes chr2L 22550176 intergenic CG17493 + chr2L_5_22545001 chr2L_22545001 D17-c3 778 chr2L 22581948 22582001 chr2L 22583762 22583815 S-element 15 1814 4.0 5.0 4.5 2.7 1867 chr2L 22581948 intron CG17494 + chr2L 22582882 intron CG17494 + chr2L 22583815 intron CG17494 + chr2L_15_22580001 chr2L_22580001 D17-c3 779 chr2L 22674043 22674072 chr2L 22674145 22674174 6 101 17.0 15.0 16.0 0.4 131 chr2L 22674043 intron CG40006 - chr2L 22674108 intron CG40006 - chr2L 22674174 intron CG40006 - chr2L_6_22670001 chr2L_22670001 D17-c3 780 chr2L 22679804 22679814 chr2L 22684601 22684611 F-element 4 4797 6.5 10.5 8.5 0.4 4807 chr2L 22679804 intron CG40006 - chr2L 22682208 intron CG40006 - chr2L 22684611 intron CG40006 - chr2L_4_22680001 chr2L_22680001 D17-c3 781 chr2L 22696828 22696883 chr2L 22696935 22696990 19 107 23.0 25.5 24.2 0.8 162 chr2L 22696828 intron CG40006 - chr2L 22696909 intron CG40006 - chr2L 22696990 intron CG40006 - chr2L_19_22695001 chr2L_22695001 D17-c3 782 chr2L 22776395 22776449 chr2L 22778209 22778263 S-element 17 1814 3.5 4.5 4.0 3.4 1868 chr2L 22776395 intergenic not near genes chr2L 22777329 intergenic not near genes chr2L 22778263 intergenic not near genes chr2L_17_22775001 chr2L_22775001 D17-c3 783 chr2L 22983922 22983944 chr2L 22984023 22984045 4 101 10.5 9.0 9.8 0.4 123 chr2L 22983922 intron cta + chr2L 22983984 intron cta + chr2L 22984045 intron cta + chr2L_4_22980001 chr2L_22980001 D17-c3 784 chr2L 23006670 23006689 chr2L 23007002 23007021 8 332 34.0 25.0 29.5 0.3 351 chr2L 23006670 intron Cht3 - chr2L 23006846 intron Cht3 - chr2L 23007021 intron Cht3 - chr2L_8_23005001 chr2L_23005001 D17-c3 785 chr2L 23168867 23168878 chr2L 23168968 23168979 5 101 22.5 25.5 24.0 0.2 112 chr2L 23168867 intron,5` UTR CG12567 -,mir-2490 + chr2L 23168923 intron CG12567 - chr2L 23168979 intron CG12567 - chr2L_5_23165001 chr2L_23165001 D17-c3 786 chr2L 23233888 23233923 chr2L 23233985 23234026 4 102 34.5 26.0 30.2 0.1 138 chr2L 23233888 intergenic not near genes chr2L 23233957 intergenic not near genes chr2L 23234026 intergenic not near genes chr2L_4_23230001 chr2L_23230001 D17-c3 787 chr2R 469958 469980 chr2R 473224 473235 F-element 4 3263 4.5 4.0 4.2 0.8 3277 chr2R 469958 intergenic not near genes chr2R 471596 intergenic not near genes chr2R 473235 intergenic not near genes chr2R_4_470001 chr2R_470001 D17-c3 788 chr2R 529320 529352 chr2R 537964 538002 Max-element 14 8648 8.0 13.0 10.5 1.2 8682 chr2R 529320 intron CG40378 + chr2R 533661 intron CG40378 + chr2R 538002 intron CG40378 + chr2R_14_530001 chr2R_530001 D17-c3 789 chr2R 952407 952444 chr2R 952555 952591 5 148 14.0 9.0 11.5 0.4 184 chr2R 952407 intergenic not near genes chr2R 952499 intergenic not near genes chr2R 952591 intergenic not near genes chr2R_5_950001 chr2R_950001 D17-c3 790 chr2R 1082373 1082377 chr2R 1087135 1087178 Doc 4 4791 13.5 17.0 15.2 0.2 4805 chr2R 1082373 intron rl + chr2R 1084776 intron rl + chr2R 1087178 intron rl + chr2R_4_1080001 chr2R_1080001 D17-c3 791 chr2R 1340582 1340591 chr2R 1340871 1340879 7 289 25.5 35.0 30.2 0.2 297 chr2R 1340582 intergenic not near genes chr2R 1340730 intergenic not near genes chr2R 1340879 intergenic not near genes chr2R_7_1340001 chr2R_1340001 D17-c3 792 chr2R 1365852 1365893 chr2R 1365984 1366030 11 136 16.5 17.0 16.8 0.6 178 chr2R 1365852 intron l(2)41Ab + chr2R 1365941 intron l(2)41Ab + chr2R 1366030 intron l(2)41Ab + chr2R_11_1365001 chr2R_1365001 D17-c3 793 chr2R 1516583 1516587 chr2R 1521336 1521340 1731 4 4753 35.5 28.0 31.8 0.1 4757 chr2R 1516583 exon Maf1 - chr2R 1518962 intron Maf1 - chr2R 1521340 5` UTR Maf1 - chr2R_4_1515001 chr2R_1515001 D17-c3 794 chr2R 1516588 1516603 chr2R 1521334 1521356 1731 12 4752 31.0 26.0 28.5 0.4 4768 chr2R 1516588 exon Maf1 - chr2R 1518972 intron Maf1 - chr2R 1521356 5` UTR Maf1 - chr2R_12_1515001 chr2R_1515001 D17-c3 795 chr2R 1600534 1600588 chr2R 1600955 1601009 14 421 34.5 24.5 29.5 0.5 475 chr2R 1600534 intergenic not near genes chr2R 1600772 intergenic not near genes chr2R 1601009 intergenic not near genes chr2R_14_1600001 chr2R_1600001 D17-c3 796 chr2R 1685447 1685487 chr2R 1685560 1685600 6 113 12.5 14.5 13.5 0.4 153 chr2R 1685447 intron CG41520 + chr2R 1685524 intron CG41520 + chr2R 1685600 intron CG41520 + chr2R_6_1685001 chr2R_1685001 D17-c3 797 chr2R 2047743 2047769 chr2R 2047998 2048024 6 255 16.5 12.5 14.5 0.4 281 chr2R 2047743 intron CG17684 - chr2R 2047884 intron CG17684 - chr2R 2048024 intron CG17684 - chr2R_6_2045001 chr2R_2045001 D17-c3 798 chr2R 2053806 2053817 chr2R 2053892 2053925 5 103 13.5 15.5 14.5 0.3 119 chr2R 2053806 intron CG17684 - chr2R 2053866 intron CG17684 - chr2R 2053925 intron CG17684 - chr2R_5_2050001 chr2R_2050001 D17-c3 799 chr2R 2110484 2110498 chr2R 2118067 2118081 17.6 8 7582 26.5 13.5 20.0 0.4 7597 chr2R 2110484 intron CG17684 - chr2R 2114282 intron CG17684 - chr2R 2118081 intron CG17684 - chr2R_8_2110001 chr2R_2110001 D17-c3 800 chr2R 2498967 2498971 chr2R 2508139 2508143 roo 4 9172 12.5 7.0 9.8 0.4 9176 chr2R 2498967 intron MFS17 - chr2R 2503555 intron MFS17 - chr2R 2508143 intron MFS17 - chr2R_4_2500001 chr2R_2500001 D17-c3 801 chr2R 2498973 2499014 chr2R 2508133 2508180 roo 10 9170 5.0 7.0 6.0 1.4 9207 chr2R 2498973 intron MFS17 - chr2R 2503576 intron MFS17 - chr2R 2508180 intron MFS17 - chr2R_10_2500001 chr2R_2500001 D17-c3 802 chr2R 2508290 2508331 chr2R 2508453 2508494 5 163 17.0 15.5 16.2 0.3 204 chr2R 2508290 intron MFS17 - chr2R 2508392 intron MFS17 - chr2R 2508494 intron MFS17 - chr2R_5_2505001 chr2R_2505001 D17-c3 803 chr2R 2591510 2591520 chr2R 2594211 2594221 roo 4 2701 51.0 32.0 41.5 0.1 2711 chr2R 2591510 intergenic not near genes chr2R 2592866 intergenic not near genes chr2R 2594221 intergenic not near genes chr2R_4_2590001 chr2R_2590001 D17-c3 804 chr2R 2942276 2942311 chr2R 2942404 2942439 7 128 19.0 17.0 18.0 0.4 163 chr2R 2942276 intron Scp1 - chr2R 2942358 intron Scp1 - chr2R 2942439 intron Scp1 - chr2R_7_2940001 chr2R_2940001 D17-c3 805 chr2R 2944992 2945004 chr2R 2945054 2945111 4 91 13.5 17.0 15.2 0.2 119 chr2R 2944992 intron Scp1 - chr2R 2945052 intron Scp1 - chr2R 2945111 intron Scp1 - chr2R_4_2945001 chr2R_2945001 D17-c3 806 chr2R 2950411 2950465 chr2R 2950557 2950612 13 142 29.0 21.5 25.2 0.5 201 chr2R 2950411 intron Scp1 - chr2R 2950512 intron Scp1 - chr2R 2950612 intron Scp1 - chr2R_13_2950001 chr2R_2950001 D17-c3 807 chr2R 3089441 3089492 chr2R 3089646 3089697 12 202 51.0 38.0 44.5 0.3 256 chr2R 3089441 intron CG42596 + chr2R 3089569 intron CG42596 + chr2R 3089697 intron CG42596 + chr2R_12_3085001 chr2R_3085001 D17-c3 808 chr2R 3144061 3144109 chr2R 3393363 3393412 Doc 12 249303 24.0 28.5 26.2 0.4 249351 chr2R 3144061 intron CG42596 + chr2R 3268736 intergenic not near genes chr2R 3393412 intergenic not near genes chr2R_12_3265001 chr2R_3265001 D17-c3 809 chr2R 3291793 3291928 chr2R 3914992 3915122 6 623196 33.5 34.5 34.0 0.2 623329 chr2R 3291793 intergenic not near genes chr2R 3603458 intergenic not near genes chr2R 3915122 intron uex - chr2R_6_3600001 chr2R_3600001 D17-c3 810 chr2R 3293718 3293751 chr2R 3293821 3293854 13 103 11.5 3.5 7.5 1.5 136 chr2R 3293718 intergenic not near genes chr2R 3293786 intergenic not near genes chr2R 3293854 intergenic not near genes chr2R_13_3290001 chr2R_3290001 D17-c3 811 chr2R 3399212 3399252 chr2R 3399323 3399363 11 111 22.0 19.0 20.5 0.5 151 chr2R 3399212 intergenic not near genes chr2R 3399288 intergenic not near genes chr2R 3399363 intergenic not near genes chr2R_11_3395001 chr2R_3395001 D17-c3 812 chr2R 3532606 3532633 chr2R 3536074 3536101 Doc 4 3468 2.0 3.0 2.5 1.1 3495 chr2R 3532606 intergenic not near genes chr2R 3534354 intergenic not near genes chr2R 3536101 intergenic not near genes chr2R_4_3530001 chr2R_3530001 D17-c3 813 chr2R 3587218 3587266 chr2R 3587320 3587368 12 102 18.0 21.5 19.8 0.6 150 chr2R 3587218 intergenic not near genes chr2R 3587293 intergenic not near genes chr2R 3587368 intergenic not near genes chr2R_12_3585001 chr2R_3585001 D17-c3 814 chr2R 469857 469860 chr2R 4141693 4141696 4 3671836 14.0 32.5 23.2 0.2 3671839 chr2R 469857 intergenic not near genes chr2R 2305776 intergenic not near genes chr2R 4141696 intergenic not near genes chr2R_4_2305001 chr2R_2305001 D17-c3 815 chr2R 4342973 4342997 chr2R 4343327 4343351 5 354 34.5 28.0 31.2 0.2 378 chr2R 4342973 intron Gprk1 - chr2R 4343162 intron Gprk1 - chr2R 4343351 intron Gprk1 - chr2R_5_4340001 chr2R_4340001 D17-c3 816 chr2R 4406863 4406914 chr2R 4406971 4407022 18 103 23.5 21.5 22.5 0.8 159 chr2R 4406863 intron Gprk1 - chr2R 4406942 intron Gprk1 - chr2R 4407022 intron Gprk1 - chr2R_18_4405001 chr2R_4405001 D17-c3 817 chr2R 4602817 4602872 chr2R 4603197 4603251 13 376 20.5 28.0 24.2 0.5 434 chr2R 4602817 intron p120ctn + chr2R 4603034 intron p120ctn + chr2R 4603251 intron p120ctn + chr2R_13_4600001 chr2R_4600001 D17-c3 818 chr2R 4622941 4622984 chr2R 4624110 4624128 1360 7 1173 16.5 18.5 17.5 0.4 1187 chr2R 4622941 intergenic CR44101 - chr2R 4623534 intergenic not near genes chr2R 4624128 intergenic not near genes chr2R_7_4620001 chr2R_4620001 D17-c3 819 chr2R 4688105 4688124 chr2R 4688223 4688242 5 118 13.5 12.5 13.0 0.4 137 chr2R 4688105 intergenic not near genes chr2R 4688174 intergenic not near genes chr2R 4688242 intergenic not near genes chr2R_5_4685001 chr2R_4685001 D17-c3 820 chr2R 4750321 4750364 chr2R 4751502 4751546 1360 6 1182 8.5 11.5 10.0 0.5 1225 chr2R 4750321 intron conu + chr2R 4750934 intron conu + chr2R 4751546 intron conu + chr2R_6_4750001 chr2R_4750001 D17-c3 821 chr2R 4783227 4783270 chr2R 4783386 4783429 21 159 12.0 12.5 12.2 1.6 202 chr2R 4783227 intergenic not near genes chr2R 4783328 intergenic not near genes chr2R 4783429 intergenic not near genes chr2R_21_4780001 chr2R_4780001 D17-c3 822 chr2R 4821201 4821241 chr2R 4821312 4821352 8 110 1.0 1.5 1.2 3.6 151 chr2R 4821201 intron CG17528 - chr2R 4821276 intron CG17528 - chr2R 4821352 intron CG17528 - chr2R_8_4820001 chr2R_4820001 D17-c3 823 chr2R 4838848 4838900 chr2R 4840396 4840448 transib2 16 1548 7.5 10.5 9.0 1.6 1600 chr2R 4838848 intergenic not near genes chr2R 4839648 intergenic not near genes chr2R 4840448 intergenic not near genes chr2R_16_4835001 chr2R_4835001 D17-c3 824 chr2R 4870725 4870741 chr2R 4871254 4871277 R1A1-element 4 533 23.0 29.5 26.2 0.1 552 chr2R 4870725 intergenic not near genes chr2R 4871001 intergenic not near genes chr2R 4871277 intergenic not near genes chr2R_4_4870001 chr2R_4870001 D17-c3 825 chr2R 4908897 4908940 chr2R 4909010 4909053 9 113 20.5 26.5 23.5 0.4 156 chr2R 4908897 intergenic not near genes chr2R 4908975 intergenic not near genes chr2R 4909053 intergenic not near genes chr2R_9_4905001 chr2R_4905001 D17-c3 826 chr2R 4916075 4916106 chr2R 4916178 4916207 7 102 11.0 11.0 11.0 0.6 132 chr2R 4916075 intergenic not near genes chr2R 4916141 intergenic not near genes chr2R 4916207 intergenic not near genes chr2R_7_4915001 chr2R_4915001 D17-c3 827 chr2R 4933353 4933391 chr2R 4933933 4933980 13 587 39.0 37.0 38.0 0.3 627 chr2R 4933353 intron Ir41a + chr2R 4933666 intron Ir41a + chr2R 4933980 intron Ir41a + chr2R_13_4930001 chr2R_4930001 D17-c3 828 chr2R 4938488 4938529 chr2R 4938649 4938690 12 161 17.5 21.5 19.5 0.6 202 chr2R 4938488 intron Ir41a + chr2R 4938589 intron Ir41a + chr2R 4938690 intron Ir41a + chr2R_12_4935001 chr2R_4935001 D17-c3 829 chr2R 5019272 5019310 chr2R 5019383 5019421 14 111 9.0 12.0 10.5 1.2 149 chr2R 5019272 intron Ir41a + chr2R 5019346 intron Ir41a + chr2R 5019421 intron Ir41a + chr2R_14_5015001 chr2R_5015001 D17-c3 830 chr2R 5029009 5029059 chr2R 5029116 5029166 14 105 26.5 28.0 27.2 0.5 157 chr2R 5029009 intergenic not near genes chr2R 5029088 intergenic not near genes chr2R 5029166 intergenic not near genes chr2R_14_5025001 chr2R_5025001 D17-c3 831 chr2R 5038500 5038519 chr2R 5039322 5039341 4 820 27.0 10.0 18.5 0.2 841 chr2R 5038500 intergenic not near genes chr2R 5038920 intergenic not near genes chr2R 5039341 intergenic not near genes chr2R_4_5035001 chr2R_5035001 D17-c3 832 chr2R 5075199 5075221 chr2R 5075352 5075374 7 153 16.0 13.0 14.5 0.5 175 chr2R 5075199 intergenic not near genes chr2R 5075286 intergenic not near genes chr2R 5075374 intergenic not near genes chr2R_7_5075001 chr2R_5075001 D17-c3 833 chr2R 5075249 5075371 chr2R 5075765 5075812 9 458 12.5 14.0 13.2 0.6 563 chr2R 5075249 intergenic not near genes chr2R 5075530 intergenic not near genes chr2R 5075812 intergenic not near genes chr2R_9_5075001 chr2R_5075001 D17-c3 834 chr2R 5075963 5075987 chr2R 5076100 5076124 7 137 29.0 25.5 27.2 0.2 161 chr2R 5075963 intergenic not near genes chr2R 5076044 intergenic not near genes chr2R 5076124 intergenic not near genes chr2R_7_5075001 chr2R_5075001 D17-c3 835 chr2R 5078656 5078707 chr2R 5078790 5078842 8 134 17.0 17.0 17.0 0.4 186 chr2R 5078656 intergenic not near genes chr2R 5078749 intergenic not near genes chr2R 5078842 intergenic not near genes chr2R_8_5075001 chr2R_5075001 D17-c3 836 chr2R 5080767 5080799 chr2R 5080878 5080915 8 113 18.0 14.0 16.0 0.5 148 chr2R 5080767 intergenic not near genes chr2R 5080841 intergenic not near genes chr2R 5080915 intergenic not near genes chr2R_8_5080001 chr2R_5080001 D17-c3 837 chr2R 5096634 5096679 chr2R 5096740 5096762 12 97 14.0 16.5 15.2 0.7 128 chr2R 5096634 intergenic not near genes chr2R 5096698 intergenic not near genes chr2R 5096762 intergenic not near genes chr2R_12_5095001 chr2R_5095001 D17-c3 838 chr2R 5103022 5103075 chr2R 5103129 5103182 16 106 24.0 29.5 26.8 0.6 160 chr2R 5103022 intergenic not near genes chr2R 5103102 intergenic not near genes chr2R 5103182 intergenic not near genes chr2R_16_5100001 chr2R_5100001 D17-c3 839 chr2R 5125229 5125275 chr2R 5125572 5125618 14 343 3.0 4.0 3.5 3.1 389 chr2R 5125229 intron gus - chr2R 5125424 intron gus - chr2R 5125618 intron gus - chr2R_14_5125001 chr2R_5125001 D17-c3 840 chr2R 5139994 5140046 chr2R 5140138 5140190 18 144 17.5 18.5 18.0 0.9 196 chr2R 5139994 intergenic not near genes chr2R 5140092 intergenic not near genes chr2R 5140190 intergenic not near genes chr2R_18_5140001 chr2R_5140001 D17-c3 841 chr2R 5150582 5150625 chr2R 5150684 5150731 16 106 22.5 24.5 23.5 0.7 149 chr2R 5150582 intron Atf6 + chr2R 5150656 intron Atf6 + chr2R 5150731 intron Atf6 + chr2R_16_5150001 chr2R_5150001 D17-c3 842 chr2R 5209764 5209813 chr2R 5210322 5210371 14 558 7.5 7.5 7.5 1.6 607 chr2R 5209764 intron Nipped-A - chr2R 5210068 intron Nipped-A - chr2R 5210371 intron Nipped-A - chr2R_14_5210001 chr2R_5210001 D17-c3 843 chr2R 5237328 5237355 chr2R 5237435 5237462 13 107 10.0 0.5 5.2 2.1 134 chr2R 5237328 intron Nipped-A - chr2R 5237395 intron Nipped-A - chr2R 5237462 intron Nipped-A - chr2R_13_5235001 chr2R_5235001 D17-c3 844 chr2R 5301825 5301878 chr2R 5301929 5301982 9 104 26.0 18.5 22.2 0.4 157 chr2R 5301825 intergenic not near genes chr2R 5301904 intergenic not near genes chr2R 5301982 intergenic not near genes chr2R_9_5300001 chr2R_5300001 D17-c3 845 chr2R 5364445 5364493 chr2R 5364551 5364599 15 105 16.0 17.5 16.8 0.8 154 chr2R 5364445 intron CR42646 + chr2R 5364522 5` UTR CR42646 + chr2R 5364599 intron CR42646 + chr2R_15_5360001 chr2R_5360001 D17-c3 846 chr2R 5417977 5418016 chr2R 5420634 5420673 Burdock 16 2657 5.5 6.0 5.8 2.4 2696 chr2R 5417977 intron laccase2 + chr2R 5419325 intron laccase2 + chr2R 5420673 intron laccase2 + chr2R_16_5415001 chr2R_5415001 D17-c3 847 chr2R 5455748 5455801 chr2R 5455851 5455904 17 102 15.5 16.5 16.0 1.0 156 chr2R 5455748 3` UTR laccase2 + chr2R 5455826 3` UTR laccase2 + chr2R 5455904 3` UTR laccase2 + chr2R_17_5455001 chr2R_5455001 D17-c3 848 chr2R 5472343 5472393 chr2R 5472463 5472513 21 118 7.5 10.0 8.8 2.1 170 chr2R 5472343 intron CG30440 - chr2R 5472428 intron CG30440 - chr2R 5472513 intron CG30440 - chr2R_21_5470001 chr2R_5470001 D17-c3 849 chr2R 5475572 5475619 chr2R 5475691 5475738 4 119 7.5 10.0 8.8 0.4 166 chr2R 5475572 intron CG30440 - chr2R 5475655 intron CG30440 - chr2R 5475738 intron CG30440 - chr2R_4_5475001 chr2R_5475001 D17-c3 850 chr2R 5503535 5503564 chr2R 5503634 5503669 6 103 10.0 6.5 8.2 0.7 134 chr2R 5503535 intron,3` UTR CG30438 +,TpnC4 - chr2R 5503602 intron,3` UTR CG30438 +,TpnC4 - chr2R 5503669 intron,intron CG30438 +,TpnC4 - chr2R_6_5500001 chr2R_5500001 D17-c3 851 chr2R 5509507 5509545 chr2R 5509628 5509666 7 121 15.5 19.0 17.2 0.4 159 chr2R 5509507 intron CG30438 + chr2R 5509586 intron CG30438 + chr2R 5509666 intron CG30438 + chr2R_7_5505001 chr2R_5505001 D17-c3 852 chr2R 5540060 5540107 chr2R 5540404 5540415 5 337 12.5 16.5 14.5 0.3 355 chr2R 5540060 intron CG30438 + chr2R 5540238 intron CG30438 + chr2R 5540415 intron CG30438 + chr2R_5_5540001 chr2R_5540001 D17-c3 853 chr2R 5543214 5543221 chr2R 5547323 5547330 invader1 4 4109 14.0 18.0 16.0 0.2 4116 chr2R 5543214 intron CG30438 + chr2R 5545272 intron CG30438 + chr2R 5547330 intron CG30438 + chr2R_4_5545001 chr2R_5545001 D17-c3 854 chr2R 5581403 5581421 chr2R 5627637 5627655 7 46234 8.0 30.5 19.2 0.3 46252 chr2R 5581403 intergenic not near genes chr2R 5604529 intron Fis1 - chr2R 5627655 intergenic not near genes chr2R_7_5600001 chr2R_5600001 D17-c3 855 chr2R 5621380 5621399 chr2R 5621485 5621499 9 104 21.5 33.5 27.5 0.3 119 chr2R 5621380 intergenic not near genes chr2R 5621440 intergenic not near genes chr2R 5621499 intergenic not near genes chr2R_9_5620001 chr2R_5620001 D17-c3 856 chr2R 5653335 5653389 chr2R 5653459 5653513 11 123 15.0 11.5 13.2 0.8 178 chr2R 5653335 intergenic CG1344 + chr2R 5653424 intergenic CG1344 + chr2R 5653513 intergenic CG1344 + chr2R_11_5650001 chr2R_5650001 D17-c3 857 chr2R 5660061 5660113 chr2R 5660170 5660221 7 109 12.0 13.5 12.8 0.5 160 chr2R 5660061 intron Not3 - chr2R 5660141 intron Not3 - chr2R 5660221 intron Not3 - chr2R_7_5660001 chr2R_5660001 D17-c3 858 chr2R 5664257 5664306 chr2R 5664362 5664411 11 102 19.0 19.5 19.2 0.5 154 chr2R 5664257 5` UTR CR45472 + chr2R 5664334 intron CR45472 + chr2R 5664411 intron CR45472 + chr2R_11_5660001 chr2R_5660001 D17-c3 859 chr2R 5710629 5710672 chr2R 5710726 5710774 8 101 10.5 11.0 10.8 0.7 145 chr2R 5710629 intron ap - chr2R 5710702 intron ap - chr2R 5710774 intron ap - chr2R_8_5710001 chr2R_5710001 D17-c3 860 chr2R 5750425 5750450 chr2R 5750542 5750556 10 114 10.0 7.5 8.8 1.0 131 chr2R 5750425 intergenic not near genes chr2R 5750490 intergenic not near genes chr2R 5750556 intergenic not near genes chr2R_10_5750001 chr2R_5750001 D17-c3 861 chr2R 5771454 5771490 chr2R 5771560 5771596 9 106 18.5 15.5 17.0 0.5 142 chr2R 5771454 intron Gp210 + chr2R 5771525 intron Gp210 + chr2R 5771596 intron Gp210 + chr2R_9_5770001 chr2R_5770001 D17-c3 862 chr2R 5772499 5772549 chr2R 5772603 5772653 9 103 14.0 12.0 13.0 0.6 154 chr2R 5772499 3` UTR Gp210 + chr2R 5772576 3` UTR Gp210 + chr2R 5772653 3` UTR Gp210 + chr2R_9_5770001 chr2R_5770001 D17-c3 863 chr2R 5790439 5790470 chr2R 5790549 5790580 6 110 11.5 7.0 9.2 0.6 141 chr2R 5790439 intergenic not near genes chr2R 5790510 intergenic not near genes chr2R 5790580 intergenic not near genes chr2R_6_5790001 chr2R_5790001 D17-c3 864 chr2R 5827576 5827603 chr2R 5827716 5827743 7 140 16.0 11.0 13.5 0.5 167 chr2R 5827576 intron dpr12 + chr2R 5827660 intron dpr12 + chr2R 5827743 intron dpr12 + chr2R_7_5825001 chr2R_5825001 D17-c3 865 chr2R 5827604 5827620 chr2R 5827703 5827760 6 133 13.5 11.0 12.2 0.5 156 chr2R 5827604 intron dpr12 + chr2R 5827682 intron dpr12 + chr2R 5827760 intron dpr12 + chr2R_6_5825001 chr2R_5825001 D17-c3 866 chr2R 5833738 5833786 chr2R 5833866 5833914 10 126 17.5 19.0 18.2 0.5 176 chr2R 5833738 intron dpr12 + chr2R 5833826 intron dpr12 + chr2R 5833914 intron dpr12 + chr2R_10_5830001 chr2R_5830001 D17-c3 867 chr2R 5837091 5837146 chr2R 5837212 5837267 14 121 30.0 31.0 30.5 0.4 176 chr2R 5837091 intron dpr12 + chr2R 5837179 intron dpr12 + chr2R 5837267 intron dpr12 + chr2R_14_5835001 chr2R_5835001 D17-c3 868 chr2R 5869254 5869298 chr2R 5874355 5874399 flea 18 5100 7.5 8.5 8.0 2.0 5145 chr2R 5869254 intergenic not near genes chr2R 5871826 intergenic not near genes chr2R 5874399 intergenic not near genes chr2R_18_5870001 chr2R_5870001 D17-c3 869 chr2R 5876845 5876901 chr2R 5876972 5877028 16 124 13.0 16.5 14.8 1.0 183 chr2R 5876845 intergenic not near genes chr2R 5876936 intergenic not near genes chr2R 5877028 intergenic not near genes chr2R_16_5875001 chr2R_5875001 D17-c3 870 chr2R 5878909 5878951 chr2R 5879014 5879056 12 105 3.5 5.0 4.2 2.3 147 chr2R 5878909 intergenic CG44438 - chr2R 5878982 intergenic CG44438 - chr2R 5879056 intergenic CG44438 - chr2R_12_5875001 chr2R_5875001 D17-c3 871 chr2R 5885343 5885375 chr2R 5885497 5885529 12 154 4.0 3.5 3.8 2.5 186 chr2R 5885343 5` UTR CR44125 + chr2R 5885436 5` UTR CR44125 + chr2R 5885529 5` UTR CR44125 + chr2R_12_5885001 chr2R_5885001 D17-c3 872 chr2R 5902133 5902191 chr2R 5909717 5909775 17.6 18 7584 4.0 4.0 4.0 3.6 7642 chr2R 5902133 intron CG43366 + chr2R 5905954 intron CG43366 + chr2R 5909775 intron CG43366 + chr2R_18_5905001 chr2R_5905001 D17-c3 873 chr2R 5991945 5991960 chr2R 5992058 5992073 4 113 15.0 16.0 15.5 0.2 128 chr2R 5991945 intron Src42A + chr2R 5992009 intron Src42A + chr2R 5992073 intron Src42A + chr2R_4_5990001 chr2R_5990001 D17-c3 874 chr2R 6025038 6025191 chr2R 6025131 6025423 10 199 9.5 13.5 11.5 0.8 385 chr2R 6025038 intergenic not near genes chr2R 6025230 intergenic not near genes chr2R 6025423 intergenic not near genes chr2R_10_6025001 chr2R_6025001 D17-c3 875 chr2R 6033420 6033468 chr2R 6033530 6033578 13 110 19.0 17.0 18.0 0.7 158 chr2R 6033420 intron SCAP - chr2R 6033499 intron SCAP - chr2R 6033578 intron SCAP - chr2R_13_6030001 chr2R_6030001 D17-c3 876 chr2R 6088152 6088197 chr2R 7315107 7315148 6 1226954 24.5 14.0 19.2 0.3 1226996 chr2R 6088152 intergenic not near genes chr2R 6701650 intron,intron CG3409 -,CG45092 - chr2R 7315148 intergenic not near genes chr2R_6_6700001 chr2R_6700001 D17-c3 877 chr2R 6096707 6096751 chr2R 6101923 6101945 BS 15 5219 9.5 11.5 10.5 1.3 5238 chr2R 6096707 intron EcR - chr2R 6099326 intron EcR - chr2R 6101945 intron EcR - chr2R_15_6095001 chr2R_6095001 D17-c3 878 chr2R 6124163 6124224 chr2R 6124286 6124319 16 119 8.5 6.5 7.5 1.9 156 chr2R 6124163 intron EcR - chr2R 6124241 intron EcR - chr2R 6124319 intron EcR - chr2R_16_6120001 chr2R_6120001 D17-c3 879 chr2R 6129302 6129348 chr2R 6129405 6129451 13 103 12.5 13.0 12.8 0.9 149 chr2R 6129302 intron EcR - chr2R 6129376 intron EcR - chr2R 6129451 intron EcR - chr2R_13_6125001 chr2R_6125001 D17-c3 880 chr2R 6173646 6173701 chr2R 6174376 6174401 8 726 12.5 15.5 14.0 0.5 755 chr2R 6173646 intergenic Cyp6w1 + chr2R 6174024 exon Cyp6w1 + chr2R 6174401 exon Cyp6w1 + chr2R_8_6170001 chr2R_6170001 D17-c3 881 chr2R 6178097 6178136 chr2R 6178248 6178287 9 150 4.5 3.5 4.0 1.8 190 chr2R 6178097 intergenic not near genes chr2R 6178192 intergenic not near genes chr2R 6178287 intergenic not near genes chr2R_9_6175001 chr2R_6175001 D17-c3 882 chr2R 6194661 6194696 chr2R 6194769 6194804 10 108 10.5 8.0 9.2 1.0 143 chr2R 6194661 intron Ptr - chr2R 6194732 intron Ptr - chr2R 6194804 intron Ptr - chr2R_10_6190001 chr2R_6190001 D17-c3 883 chr2R 3998874 3998879 chr2R 6486824 6486830 5 2487950 40.0 23.5 31.8 0.2 2487956 chr2R 3998874 intergenic not near genes chr2R 5242852 intron Nipped-A - chr2R 6486830 intergenic not near genes chr2R_5_5240001 chr2R_5240001 D17-c3 884 chr2R 6494505 6494548 chr2R 6499292 6499335 F-element 13 4786 3.0 3.0 3.0 3.2 4830 chr2R 6494505 intergenic not near genes chr2R 6496920 intergenic not near genes chr2R 6499335 intergenic not near genes chr2R_13_6495001 chr2R_6495001 D17-c3 885 chr2R 6530745 6530795 chr2R 6530850 6530900 14 105 9.5 12.5 11.0 1.2 155 chr2R 6530745 intron jing + chr2R 6530822 intron jing + chr2R 6530900 intron jing + chr2R_14_6530001 chr2R_6530001 D17-c3 886 chr2R 6539796 6539856 chr2R 6539944 6539996 20 141 4.5 1.5 3.0 5.0 200 chr2R 6539796 intron jing + chr2R 6539896 intron jing + chr2R 6539996 intron jing + chr2R_20_6535001 chr2R_6535001 D17-c3 887 chr2R 6546693 6546744 chr2R 6546819 6546870 8 126 17.5 21.0 19.2 0.4 177 chr2R 6546693 intron jing + chr2R 6546782 intron jing + chr2R 6546870 intron jing + chr2R_8_6545001 chr2R_6545001 D17-c3 888 chr2R 6562523 6562548 chr2R 6562637 6562662 4 114 23.0 23.0 23.0 0.2 139 chr2R 6562523 intron jing + chr2R 6562592 intron jing + chr2R 6562662 intron jing + chr2R_4_6560001 chr2R_6560001 D17-c3 889 chr2R 6562550 6562579 chr2R 6562632 6562637 11 106 19.0 20.0 19.5 0.5 87 chr2R 6562550 intron jing + chr2R 6562594 intron jing + chr2R 6562637 intron jing + chr2R_11_6560001 chr2R_6560001 D17-c3 890 chr2R 6568760 6568787 chr2R 6568912 6568938 9 151 19.5 16.0 17.8 0.5 178 chr2R 6568760 intron jing + chr2R 6568849 intron jing + chr2R 6568938 intron jing + chr2R_9_6565001 chr2R_6565001 D17-c3 891 chr2R 6577918 6577976 chr2R 6578024 6578082 18 105 19.0 23.0 21.0 0.8 164 chr2R 6577918 intron jing + chr2R 6578000 intron jing + chr2R 6578082 intron jing + chr2R_18_6575001 chr2R_6575001 D17-c3 892 chr2R 6579749 6579799 chr2R 6584860 6584910 flea 16 5111 4.5 5.5 5.0 2.7 5161 chr2R 6579749 intron jing + chr2R 6582330 intron jing + chr2R 6584910 intron jing + chr2R_16_6580001 chr2R_6580001 D17-c3 893 chr2R 6603913 6603969 chr2R 6604030 6604086 9 117 19.0 11.0 15.0 0.6 173 chr2R 6603913 intron jing + chr2R 6604000 intron jing + chr2R 6604086 intron jing + chr2R_9_6600001 chr2R_6600001 D17-c3 894 chr2R 6699565 6699603 chr2R 6699675 6699713 4 110 8.5 7.5 8.0 0.4 148 chr2R 6699565 intergenic Rab2 + chr2R 6699639 intergenic Rab2 + chr2R 6699713 intergenic Rab2 + chr2R_4_6695001 chr2R_6695001 D17-c3 895 chr2R 6741472 6741530 chr2R 6741575 6741633 9 94 10.0 11.0 10.5 0.8 161 chr2R 6741472 intergenic phtf + chr2R 6741552 intergenic phtf + chr2R 6741633 intergenic phtf + chr2R_9_6740001 chr2R_6740001 D17-c3 896 chr2R 6797064 6797079 chr2R 6797180 6797197 4 118 35.0 32.0 33.5 0.1 133 chr2R 6797064 5` UTR Epac - chr2R 6797130 5` UTR Epac - chr2R 6797197 5` UTR Epac - chr2R_4_6795001 chr2R_6795001 D17-c3 897 chr2R 6801296 6801324 chr2R 6801397 6801426 4 102 43.0 36.0 39.5 0.1 130 chr2R 6801296 intergenic not near genes chr2R 6801361 intergenic not near genes chr2R 6801426 intergenic not near genes chr2R_4_6800001 chr2R_6800001 D17-c3 898 chr2R 6906410 6906461 chr2R 6906534 6906585 13 122 15.5 17.5 16.5 0.7 175 chr2R 6906410 intron CG30158 + chr2R 6906498 intron CG30158 + chr2R 6906585 intron CG30158 + chr2R_13_6905001 chr2R_6905001 D17-c3 899 chr2R 6941455 6941506 chr2R 6941603 6941655 17 147 39.0 30.0 34.5 0.5 200 chr2R 6941455 intron mim - chr2R 6941555 intron mim - chr2R 6941655 intron mim - chr2R_17_6940001 chr2R_6940001 D17-c3 900 chr2R 6948104 6948146 chr2R 6951865 6951905 7 3759 19.5 30.5 25.0 0.3 3801 chr2R 6948104 intron,intron mim -,CheB42c - chr2R 6950004 intron,intron,intron mim -,CheB42c -,CheB42a + chr2R 6951905 intron,intron,intron mim -,CheB42c -,ppk25 + chr2R_7_6950001 chr2R_6950001 D17-c3 901 chr2R 6952147 6952178 chr2R 6959752 6959783 opus 11 7605 5.0 2.0 3.5 2.4 7636 chr2R 6952147 intron,intron,exon mim -,CheB42c -,ppk25 + chr2R 6955965 intron,intron mim -,CheB42c - chr2R 6959783 intron,intron mim -,CheB42c - chr2R_11_6955001 chr2R_6955001 D17-c3 902 chr2R 6964069 6964111 chr2R 6964353 6964395 16 284 14.5 17.0 15.8 1.0 326 chr2R 6964069 intron,intron mim -,CheB42c - chr2R 6964232 intron,intron mim -,CheB42c - chr2R 6964395 intron,intron mim -,CheB42c - chr2R_16_6960001 chr2R_6960001 D17-c3 903 chr2R 7103355 7103406 chr2R 7103456 7103507 15 100 11.5 9.5 10.5 1.3 152 chr2R 7103355 intron esn + chr2R 7103431 intron esn + chr2R 7103507 intron esn + chr2R_15_7100001 chr2R_7100001 D17-c3 904 chr2R 7139946 7139951 chr2R 7141463 7141463 hopper2 4 1516 7.0 18.5 12.8 0.3 1517 chr2R 7139946 intergenic not near genes chr2R 7140704 intergenic not near genes chr2R 7141463 intergenic not near genes chr2R_4_7140001 chr2R_7140001 D17-c3 905 chr2R 7160533 7160583 chr2R 7160635 7160686 16 103 7.5 5.0 6.2 2.2 153 chr2R 7160533 intron pk + chr2R 7160610 intron pk + chr2R 7160686 intron pk + chr2R_16_7160001 chr2R_7160001 D17-c3 906 chr2R 7164245 7164285 chr2R 7164461 7164501 11 215 5.5 14.0 9.8 1.0 256 chr2R 7164245 intron pk + chr2R 7164373 intron pk + chr2R 7164501 intron pk + chr2R_11_7160001 chr2R_7160001 D17-c3 907 chr2R 7196555 7196595 chr2R 7201349 7201395 F-element 8 4799 5.5 5.5 5.5 1.2 4840 chr2R 7196555 intron pk + chr2R 7198975 intron pk + chr2R 7201395 intron pk + chr2R_8_7195001 chr2R_7195001 D17-c3 908 chr2R 7209860 7209869 chr2R 7217646 7217655 roo 6 7786 3.5 8.0 5.8 0.9 7795 chr2R 7209860 intron pk + chr2R 7213758 intron pk + chr2R 7217655 intron pk + chr2R_6_7210001 chr2R_7210001 D17-c3 909 chr2R 7235798 7235847 chr2R 7240915 7240964 jockey 16 5116 10.0 4.0 7.0 2.0 5166 chr2R 7235798 intergenic not near genes chr2R 7238381 intergenic not near genes chr2R 7240964 intergenic not near genes chr2R_16_7235001 chr2R_7235001 D17-c3 910 chr2R 7243382 7243394 chr2R 7247778 7247790 4 4396 21.5 32.5 27.0 0.1 4408 chr2R 7243382 3` UTR Ady43A - chr2R 7245586 5` UTR Ady43A - chr2R 7247790 intergenic not near genes chr2R_4_7245001 chr2R_7245001 D17-c3 911 chr2R 7311774 7311795 chr2R 7311877 7311898 11 103 9.5 14.5 12.0 0.8 124 chr2R 7311774 intron CG12164 + chr2R 7311836 intron CG12164 + chr2R 7311898 intron CG12164 + chr2R_11_7310001 chr2R_7310001 D17-c3 912 chr2R 7328106 7328148 chr2R 7328242 7328284 11 136 3.0 5.0 4.0 2.2 178 chr2R 7328106 intron,intron Dscam1 -,CR45129 + chr2R 7328195 intron,intron Dscam1 -,CR45129 + chr2R 7328284 intron,intron Dscam1 -,CR45129 + chr2R_11_7325001 chr2R_7325001 D17-c3 913 chr2R 7353371 7353418 chr2R 7353502 7353545 16 130 14.5 13.5 14.0 1.1 174 chr2R 7353371 intron Dscam1 - chr2R 7353458 intron Dscam1 - chr2R 7353545 intron Dscam1 - chr2R_16_7350001 chr2R_7350001 D17-c3 914 chr2R 7371720 7371779 chr2R 7371849 7371908 25 128 27.0 31.0 29.0 0.8 188 chr2R 7371720 intron Dscam1 - chr2R 7371814 intron Dscam1 - chr2R 7371908 intron Dscam1 - chr2R_25_7370001 chr2R_7370001 D17-c3 915 chr2R 7417881 7418167 chr2R 7417992 7418271 13 106 14.5 16.0 15.2 0.8 390 chr2R 7417881 intergenic not near genes chr2R 7418076 intergenic not near genes chr2R 7418271 intergenic not near genes chr2R_13_7415001 chr2R_7415001 D17-c3 916 chr2R 7434873 7434911 chr2R 7439199 7439237 Juan 16 4325 7.0 9.0 8.0 1.8 4364 chr2R 7434873 intergenic so + chr2R 7437055 intergenic not near genes chr2R 7439237 intergenic not near genes chr2R_16_7435001 chr2R_7435001 D17-c3 917 chr2R 7608384 7608441 chr2R 7613612 7613667 I-element 12 5228 1.0 0.0 0.5 8.0 5283 chr2R 7608384 intron CG1358 - chr2R 7611026 intron CG1358 - chr2R 7613667 intron CG1358 - chr2R_12_7610001 chr2R_7610001 D17-c3 918 chr2R 7629266 7629316 chr2R 7629409 7629459 10 141 10.5 16.0 13.2 0.7 193 chr2R 7629266 intron CG43340 + chr2R 7629362 intron CG43340 + chr2R 7629459 intron CG43340 + chr2R_10_7625001 chr2R_7625001 D17-c3 919 chr2R 7642843 7642892 chr2R 7642948 7642997 19 105 26.5 27.5 27.0 0.7 154 chr2R 7642843 intron CG43340 + chr2R 7642920 intron CG43340 + chr2R 7642997 intron CG43340 + chr2R_19_7640001 chr2R_7640001 D17-c3 920 chr2R 7677431 7677456 chr2R 7677560 7677611 4 133 12.5 13.0 12.8 0.3 180 chr2R 7677431 3` UTR CG1399 - chr2R 7677521 3` UTR CG1399 - chr2R 7677611 3` UTR CG1399 - chr2R_4_7675001 chr2R_7675001 D17-c3 921 chr2R 7691990 7692036 chr2R 7692096 7692142 21 106 4.5 4.0 4.2 4.0 152 chr2R 7691990 intron CG1399 - chr2R 7692066 intron CG1399 - chr2R 7692142 intron CG1399 - chr2R_21_7690001 chr2R_7690001 D17-c3 922 chr2R 7737893 7738185 chr2R 7737997 7738287 11 103 18.0 9.0 13.5 0.8 394 chr2R 7737893 intergenic not near genes chr2R 7738090 intergenic not near genes chr2R 7738287 intergenic not near genes chr2R_11_7735001 chr2R_7735001 D17-c3 923 chr2R 7760261 7760305 chr2R 7760423 7760462 12 161 22.5 19.0 20.8 0.6 201 chr2R 7760261 intron,intron CG30497 -,CG45093 - chr2R 7760362 intron,intron CG30497 -,CG45093 - chr2R 7760462 intron,intron CG30497 -,CG45093 - chr2R_12_7760001 chr2R_7760001 D17-c3 924 chr2R 7769732 7769766 chr2R 7769828 7769839 5 95 15.0 14.0 14.5 0.3 107 chr2R 7769732 intron,intron CG30497 -,CG45093 - chr2R 7769786 intron,intron CG30497 -,CG45093 - chr2R 7769839 intron,intron CG30497 -,CG45093 - chr2R_5_7765001 chr2R_7765001 D17-c3 925 chr2R 7815649 7815696 chr2R 7822143 7822190 Burdock 25 6494 6.5 10.0 8.2 2.7 6541 chr2R 7815649 intergenic CG1882 + chr2R 7818920 intergenic not near genes chr2R 7822190 3` UTR cathD - chr2R_25_7815001 chr2R_7815001 D17-c3 926 chr2R 7842172 7842225 chr2R 7842284 7842338 9 113 22.0 24.0 23.0 0.4 166 chr2R 7842172 intron Dgk - chr2R 7842255 intron Dgk - chr2R 7842338 intron Dgk - chr2R_9_7840001 chr2R_7840001 D17-c3 927 chr2R 7856793 7856801 chr2R 7856907 7856915 5 114 29.5 22.5 26.0 0.2 122 chr2R 7856793 intron Dgk - chr2R 7856854 intron Dgk - chr2R 7856915 intron Dgk - chr2R_5_7855001 chr2R_7855001 D17-c3 928 chr2R 7862208 7862249 chr2R 7867347 7867387 flea 6 5136 17.0 4.0 10.5 0.5 5179 chr2R 7862208 intron Dgk - chr2R 7864798 intron Dgk - chr2R 7867387 intron Dgk - chr2R_6_7860001 chr2R_7860001 D17-c3 929 chr2R 7869168 7869211 chr2R 7873979 7874022 Doc 13 4811 8.0 5.5 6.8 1.7 4854 chr2R 7869168 intron Dgk - chr2R 7871595 intron Dgk - chr2R 7874022 intron Dgk - chr2R_13_7870001 chr2R_7870001 D17-c3 930 chr2R 7897140 7897152 chr2R 7897254 7897266 6 114 8.0 23.5 15.8 0.4 126 chr2R 7897140 intron CG30377 + chr2R 7897203 intron CG30377 + chr2R 7897266 intron CG30377 + chr2R_6_7895001 chr2R_7895001 D17-c3 931 chr2R 7915691 7915737 chr2R 7915808 7915854 13 117 11.0 14.5 12.8 0.9 163 chr2R 7915691 intron CG12159 - chr2R 7915772 intron CG12159 - chr2R 7915854 intron CG12159 - chr2R_13_7915001 chr2R_7915001 D17-c3 932 chr2R 7920143 7920185 chr2R 7920255 7920297 16 110 42.5 41.0 41.8 0.4 154 chr2R 7920143 exon Cul1 + chr2R 7920220 exon Cul1 + chr2R 7920297 exon Cul1 + chr2R_16_7920001 chr2R_7920001 D17-c3 933 chr2R 7919981 7920020 chr2R 7924473 7924519 7 4498 50.5 65.0 57.8 0.1 4538 chr2R 7919981 intron Cul1 + chr2R 7922250 exon Or43b - chr2R 7924519 exon Kdm4A - chr2R_7_7920001 chr2R_7920001 D17-c3 934 chr2R 8014415 8014451 chr2R 8014525 8014561 7 110 13.5 16.0 14.8 0.4 146 chr2R 8014415 intergenic not near genes chr2R 8014488 intergenic not near genes chr2R 8014561 intergenic not near genes chr2R_7_8010001 chr2R_8010001 D17-c3 935 chr2R 8015628 8015679 chr2R 8017676 8017727 24 2047 5.5 7.0 6.2 3.3 2099 chr2R 8015628 intergenic mir-4981 + chr2R 8016678 intergenic not near genes chr2R 8017727 intergenic not near genes chr2R_24_8015001 chr2R_8015001 D17-c3 936 chr2R 8026785 8026821 chr2R 8026886 8026922 6 101 15.5 7.0 11.2 0.5 137 chr2R 8026785 intergenic CR45267 + chr2R 8026854 intergenic CR45267 + chr2R 8026922 intergenic CR45267 + chr2R_6_8025001 chr2R_8025001 D17-c3 937 chr2R 8036229 8036284 chr2R 8036336 8036391 10 107 20.5 21.0 20.8 0.5 162 chr2R 8036229 intron Optix + chr2R 8036310 intron Optix + chr2R 8036391 intron Optix + chr2R_10_8035001 chr2R_8035001 D17-c3 938 chr2R 8044533 8044551 chr2R 8044643 8044661 7 109 46.0 30.0 38.0 0.2 128 chr2R 8044533 intergenic not near genes chr2R 8044597 intergenic not near genes chr2R 8044661 intergenic not near genes chr2R_7_8040001 chr2R_8040001 D17-c3 939 chr2R 8051192 8051240 chr2R 8051296 8051350 16 108 22.0 20.0 21.0 0.7 158 chr2R 8051192 intergenic not near genes chr2R 8051271 intergenic not near genes chr2R 8051350 intergenic not near genes chr2R_16_8050001 chr2R_8050001 D17-c3 940 chr2R 8067045 8067078 chr2R 8067154 8067187 14 109 13.0 17.5 15.2 0.9 142 chr2R 8067045 intron CG17977 - chr2R 8067116 intron CG17977 - chr2R 8067187 exon CG17977 - chr2R_14_8065001 chr2R_8065001 D17-c3 941 chr2R 8089238 8089284 chr2R 8089349 8089395 7 111 13.0 20.5 16.8 0.4 157 chr2R 8089238 3` UTR sut2 + chr2R 8089316 intergenic sut2 +,sut3 + chr2R 8089395 intergenic sut3 +,sut2 + chr2R_7_8085001 chr2R_8085001 D17-c3 942 chr2R 8105914 8105965 chr2R 8106030 8106081 15 116 19.0 18.0 18.5 0.8 167 chr2R 8105914 5` UTR Cul4 - chr2R 8105998 intron Cul4 - chr2R 8106081 5` UTR Cul4 - chr2R_15_8105001 chr2R_8105001 D17-c3 943 chr2R 8142367 8142389 chr2R 8142477 8142499 7 110 20.5 19.5 20.0 0.3 132 chr2R 8142367 intron Lpin - chr2R 8142433 intron Lpin - chr2R 8142499 intron Lpin - chr2R_7_8140001 chr2R_8140001 D17-c3 944 chr2R 8155563 8155613 chr2R 8155677 8155727 32 113 8.0 10.0 9.0 3.2 164 chr2R 8155563 intron,intron Lpin -,kermit - chr2R 8155645 intron,intron Lpin -,kermit - chr2R 8155727 intron,intron Lpin -,kermit - chr2R_32_8155001 chr2R_8155001 D17-c3 945 chr2R 8157876 8157910 chr2R 8157989 8158023 12 111 27.0 27.0 27.0 0.4 147 chr2R 8157876 5` UTR CR44068 + chr2R 8157950 5` UTR CR44068 + chr2R 8158023 5` UTR CR44068 + chr2R_12_8155001 chr2R_8155001 D17-c3 946 chr2R 8160922 8160943 chr2R 8161032 8161058 1360 15 115 39.5 45.0 42.2 0.3 136 chr2R 8160922 exon CG8708 - chr2R 8160990 intron CG8708 - chr2R 8161058 intron CG8708 - chr2R_15_8160001 chr2R_8160001 D17-c3 947 chr2R 8191865 8191915 chr2R 8191968 8192013 10 104 17.5 17.0 17.2 0.5 148 chr2R 8191865 intron LRP1 + chr2R 8191939 intron LRP1 + chr2R 8192013 intron LRP1 + chr2R_10_8190001 chr2R_8190001 D17-c3 948 chr2R 8330841 8330881 chr2R 8331352 8331392 roo 17 511 9.5 6.5 8.0 1.9 551 chr2R 8330841 intron pdm3 + chr2R 8331116 intron pdm3 + chr2R 8331392 intron pdm3 + chr2R_17_8330001 chr2R_8330001 D17-c3 949 chr2R 8338616 8338671 chr2R 8338723 8338778 21 106 13.5 21.5 17.5 1.1 162 chr2R 8338616 intron pdm3 + chr2R 8338697 intron pdm3 + chr2R 8338778 intron pdm3 + chr2R_21_8335001 chr2R_8335001 D17-c3 950 chr2R 8398187 8398241 chr2R 8402993 8403047 Doc 26 4806 8.0 11.5 9.8 2.4 4860 chr2R 8398187 intron CG2121 - chr2R 8400617 intron CG2121 - chr2R 8403047 intron CG2121 - chr2R_26_8400001 chr2R_8400001 D17-c3 951 chr2R 8416302 8416309 chr2R 8417151 8417158 I-element 5 849 10.0 12.0 11.0 0.4 856 chr2R 8416302 intergenic not near genes chr2R 8416730 intergenic CG43296 - chr2R 8417158 intergenic CG43296 - chr2R_5_8415001 chr2R_8415001 D17-c3 952 chr2R 8419337 8419392 chr2R 8419445 8419500 16 108 16.5 19.5 18.0 0.8 163 chr2R 8419337 intergenic not near genes chr2R 8419418 intergenic not near genes chr2R 8419500 intergenic not near genes chr2R_16_8415001 chr2R_8415001 D17-c3 953 chr2R 8512741 8512797 chr2R 8512845 8512901 28 103 25.0 24.0 24.5 1.1 160 chr2R 8512741 intron mtt - chr2R 8512821 intron mtt - chr2R 8512901 intron mtt - chr2R_28_8510001 chr2R_8510001 D17-c3 954 chr2R 8518776 8518787 chr2R 12066271 12066282 5 3547495 12.5 1.0 6.8 0.6 3547506 chr2R 8518776 intron mtt - chr2R 10292529 intron CAP + chr2R 12066282 intron CG8888 - chr2R_5_10290001 chr2R_10290001 D17-c3 955 chr2R 8536189 8536230 chr2R 8536429 8536487 11 251 21.5 20.5 21.0 0.5 298 chr2R 8536189 intergenic not near genes chr2R 8536338 intergenic not near genes chr2R 8536487 intergenic not near genes chr2R_11_8535001 chr2R_8535001 D17-c3 956 chr2R 8612563 8612600 chr2R 8612665 8612702 4 102 14.5 14.0 14.2 0.3 139 chr2R 8612563 intron CG8642 - chr2R 8612632 intron CG8642 - chr2R 8612702 intron CG8642 - chr2R_4_8610001 chr2R_8610001 D17-c3 957 chr2R 8722740 8722792 chr2R 8723006 8723046 pogo 20 263 8.0 7.5 7.8 2.3 306 chr2R 8722740 intron CG14767 - chr2R 8722893 intron CG14767 - chr2R 8723046 intron CG14767 - chr2R_20_8720001 chr2R_8720001 D17-c3 958 chr2R 8729886 8729922 chr2R 8729992 8730028 12 106 33.0 37.0 35.0 0.3 142 chr2R 8729886 intron stmA - chr2R 8729957 intron stmA - chr2R 8730028 intron stmA - chr2R_12_8725001 chr2R_8725001 D17-c3 959 chr2R 8764099 8764130 chr2R 8764273 8764293 11 173 20.5 26.5 23.5 0.4 194 chr2R 8764099 intergenic not near genes chr2R 8764196 intergenic not near genes chr2R 8764293 intergenic not near genes chr2R_11_8760001 chr2R_8760001 D17-c3 960 chr2R 8777902 8777946 chr2R 8784131 8784175 diver 11 6227 3.0 6.5 4.8 1.9 6273 chr2R 8777902 intergenic not near genes chr2R 8781038 intergenic not near genes chr2R 8784175 intergenic not near genes chr2R_11_8780001 chr2R_8780001 D17-c3 961 chr2R 8835434 8835462 chr2R 8835515 8835529 9 79 34.5 27.5 31.0 0.3 95 chr2R 8835434 intron sns + chr2R 8835482 intron sns + chr2R 8835529 intron sns + chr2R_9_8835001 chr2R_8835001 D17-c3 962 chr2R 8847168 8847189 chr2R 8847295 8847316 6 127 16.5 27.0 21.8 0.3 148 chr2R 8847168 intron sns + chr2R 8847242 intron sns + chr2R 8847316 intron sns + chr2R_6_8845001 chr2R_8845001 D17-c3 963 chr2R 8924433 8924459 chr2R 8924535 8924558 11 99 38.5 29.5 34.0 0.3 125 chr2R 8924433 exon CG8243 + chr2R 8924496 exon CG8243 + chr2R 8924558 exon CG8243 + chr2R_11_8920001 chr2R_8920001 D17-c3 964 chr2R 8960431 8960477 chr2R 8960608 8960654 12 177 25.5 16.5 21.0 0.5 223 chr2R 8960431 exon babo + chr2R 8960542 3` UTR babo + chr2R 8960654 3` UTR babo + chr2R_12_8960001 chr2R_8960001 D17-c3 965 chr2R 8976176 8976224 chr2R 8976290 8976338 8 114 11.0 10.0 10.5 0.7 162 chr2R 8976176 intron CG8213 - chr2R 8976257 intron CG8213 - chr2R 8976338 intron CG8213 - chr2R_8_8975001 chr2R_8975001 D17-c3 966 chr2R 9033512 9033558 chr2R 9033632 9033684 15 122 35.0 38.0 36.5 0.4 172 chr2R 9033512 intergenic not near genes chr2R 9033598 intergenic not near genes chr2R 9033684 intergenic not near genes chr2R_15_9030001 chr2R_9030001 D17-c3 967 chr2R 9047397 9047428 chr2R 9047517 9047547 6 119 11.0 15.0 13.0 0.4 150 chr2R 9047397 intron CG13743 - chr2R 9047472 intron CG13743 - chr2R 9047547 intron CG13743 - chr2R_6_9045001 chr2R_9045001 D17-c3 968 chr2R 9075883 9075931 chr2R 9076038 9076091 17 159 23.5 13.0 18.2 0.9 208 chr2R 9075883 exon ana + chr2R 9075987 intron ana + chr2R 9076091 intron ana + chr2R_17_9075001 chr2R_9075001 D17-c3 969 chr2R 9079388 9079433 chr2R 9079519 9079564 11 131 20.5 18.0 19.2 0.5 176 chr2R 9079388 intron CG8083 + chr2R 9079476 intron CG8083 + chr2R 9079564 intron CG8083 + chr2R_11_9075001 chr2R_9075001 D17-c3 970 chr2R 9151284 9151329 chr2R 9157779 9157824 Burdock 24 6495 8.0 8.5 8.2 2.6 6540 chr2R 9151284 exon CG30345 + chr2R 9154554 intergenic not near genes chr2R 9157824 intergenic CG8008 - chr2R_24_9150001 chr2R_9150001 D17-c3 971 chr2R 9161703 9161741 chr2R 9161819 9161846 8 109 45.5 39.5 42.5 0.2 143 chr2R 9161703 5` UTR CR44283 + chr2R 9161774 5` UTR CR44283 + chr2R 9161846 5` UTR CR44283 + chr2R_8_9160001 chr2R_9160001 D17-c3 972 chr2R 9212672 9212712 chr2R 9213183 9213223 roo 17 511 15.0 12.0 13.5 1.2 551 chr2R 9212672 intergenic CR45309 + chr2R 9212948 intergenic CR45309 + chr2R 9213223 5` UTR CR45309 + chr2R_17_9210001 chr2R_9210001 D17-c3 973 chr2R 9227847 9227902 chr2R 9227959 9228014 16 111 20.5 17.5 19.0 0.8 167 chr2R 9227847 3` UTR hig - chr2R 9227930 3` UTR hig - chr2R 9228014 3` UTR hig - chr2R_16_9225001 chr2R_9225001 D17-c3 974 chr2R 9230209 9230242 chr2R 9230314 9230347 16 101 23.5 33.0 28.2 0.5 138 chr2R 9230209 intron hig - chr2R 9230278 intron hig - chr2R 9230347 exon hig - chr2R_16_9230001 chr2R_9230001 D17-c3 975 chr2R 9236593 9236625 chr2R 9236694 9236737 7 110 9.5 12.0 10.8 0.6 144 chr2R 9236593 intron hig - chr2R 9236665 intron hig - chr2R 9236737 intron hig - chr2R_7_9235001 chr2R_9235001 D17-c3 976 chr2R 9237258 9237298 chr2R 9237362 9237402 6 104 7.0 8.0 7.5 0.7 144 chr2R 9237258 intron hig - chr2R 9237330 intron hig - chr2R 9237402 intron hig - chr2R_6_9235001 chr2R_9235001 D17-c3 977 chr2R 9249230 9249281 chr2R 9249339 9249388 6 108 9.0 20.0 14.5 0.4 158 chr2R 9249230 intergenic not near genes chr2R 9249309 intergenic not near genes chr2R 9249388 intergenic not near genes chr2R_6_9245001 chr2R_9245001 D17-c3 978 chr2R 9256029 9256078 chr2R 9256137 9256186 20 106 33.0 45.0 39.0 0.5 157 chr2R 9256029 intron Pkn - chr2R 9256108 intron Pkn - chr2R 9256186 intron Pkn - chr2R_20_9255001 chr2R_9255001 D17-c3 979 chr2R 9282040 9282048 chr2R 9286045 9286053 8 4005 42.0 82.0 62.0 0.1 4013 chr2R 9282040 intron Pkn - chr2R 9284046 5` UTR Pkn - chr2R 9286053 exon CG2063 - chr2R_8_9280001 chr2R_9280001 D17-c3 980 chr2R 9282039 9282099 chr2R 9286054 9286104 28 4006 47.5 78.5 63.0 0.4 4065 chr2R 9282039 intron Pkn - chr2R 9284072 5` UTR Pkn - chr2R 9286104 exon CG2063 - chr2R_28_9280001 chr2R_9280001 D17-c3 981 chr2R 9329972 9330026 chr2R 9330083 9330137 12 111 21.0 16.0 18.5 0.6 165 chr2R 9329972 intron,intron CG13739 -,CG13954 - chr2R 9330054 intron,intron CG13739 -,CG13954 - chr2R 9330137 intron,intron CG13739 -,CG13954 - chr2R_12_9330001 chr2R_9330001 D17-c3 982 chr2R 9352252 9352256 chr2R 9361426 9361432 roo 4 9176 9.0 13.0 11.0 0.3 9180 chr2R 9352252 intron CG13954 - chr2R 9356842 intron CG13954 - chr2R 9361432 intron CG13954 - chr2R_4_9355001 chr2R_9355001 D17-c3 983 chr2R 9368108 9368136 chr2R 9368201 9368237 10 99 30.5 21.5 26.0 0.4 129 chr2R 9368108 intron CG13954 - chr2R 9368172 intron CG13954 - chr2R 9368237 intron CG13954 - chr2R_10_9365001 chr2R_9365001 D17-c3 984 chr2R 9389965 9389977 chr2R 9390114 9390126 6 149 14.5 15.0 14.8 0.4 161 chr2R 9389965 intergenic l(2)03659 +,CG13954 - chr2R 9390046 intergenic l(2)03659 + chr2R 9390126 intergenic l(2)03659 + chr2R_6_9390001 chr2R_9390001 D17-c3 985 chr2R 9391046 9391087 chr2R 9391632 9391673 11 585 17.5 34.5 26.0 0.4 627 chr2R 9391046 exon l(2)03659 + chr2R 9391360 exon l(2)03659 + chr2R 9391673 exon l(2)03659 + chr2R_11_9390001 chr2R_9390001 D17-c3 986 chr2R 9429771 9429826 chr2R 9429901 9429956 25 129 21.5 20.5 21.0 1.1 185 chr2R 9429771 intron Pdk + chr2R 9429864 intron Pdk + chr2R 9429956 intron Pdk + chr2R_25_9425001 chr2R_9425001 D17-c3 987 chr2R 9466648 9466687 chr2R 9466754 9466793 17 105 13.5 15.5 14.5 1.1 145 chr2R 9466648 intron Camta + chr2R 9466720 intron Camta + chr2R 9466793 intron Camta + chr2R_17_9465001 chr2R_9465001 D17-c3 988 chr2R 9480054 9480099 chr2R 9490610 9490655 roo 27 10556 12.0 10.5 11.2 2.2 10601 chr2R 9480054 intergenic not near genes chr2R 9485354 intergenic not near genes chr2R 9490655 intergenic not near genes chr2R_27_9485001 chr2R_9485001 D17-c3 989 chr2R 9509410 9509455 chr2R 9509519 9509564 20 108 19.0 8.0 13.5 1.4 154 chr2R 9509410 intron brp + chr2R 9509487 intron brp + chr2R 9509564 intron brp + chr2R_20_9505001 chr2R_9505001 D17-c3 990 chr2R 9510638 9510697 chr2R 9510779 9510838 19 140 62.5 40.0 51.2 0.4 200 chr2R 9510638 exon brp + chr2R 9510738 intron brp + chr2R 9510838 exon brp + chr2R_19_9510001 chr2R_9510001 D17-c3 991 chr2R 9561800 9561847 chr2R 9561912 9561960 11 113 0.0 4.0 2.0 3.7 160 chr2R 9561800 3` UTR,intron CR45281 -,CG1809 + chr2R 9561880 3` UTR,intron CR45281 -,CG1809 + chr2R 9561960 3` UTR,intron CR45281 -,CG1809 + chr2R_11_9560001 chr2R_9560001 D17-c3 992 chr2R 9629562 9629619 chr2R 9629768 9629825 22 205 4.5 9.0 6.8 2.8 263 chr2R 9629562 intron Mmp2 - chr2R 9629694 intron Mmp2 - chr2R 9629825 intron Mmp2 - chr2R_22_9625001 chr2R_9625001 D17-c3 993 chr2R 9669113 9669170 chr2R 9669239 9669296 42 125 13.5 9.5 11.5 3.4 183 chr2R 9669113 intron Mmp2 - chr2R 9669204 intron Mmp2 - chr2R 9669296 intron Mmp2 - chr2R_42_9665001 chr2R_9665001 D17-c3 994 chr2R 9671161 9671216 chr2R 9671263 9671318 32 101 10.0 10.0 10.0 2.9 157 chr2R 9671161 intron Mmp2 - chr2R 9671240 intron Mmp2 - chr2R 9671318 intron Mmp2 - chr2R_32_9670001 chr2R_9670001 D17-c3 995 chr2R 9693732 9693786 chr2R 9716153 9716207 4 22421 21.5 14.0 17.8 0.2 22475 chr2R 9693732 intergenic Uba1 - chr2R 9704970 exon CG30002 + chr2R 9716207 3` UTR dap + chr2R_4_9700001 chr2R_9700001 D17-c3 996 chr2R 9699387 9699435 chr2R 9699498 9699526 19 109 7.0 5.5 6.2 2.6 139 chr2R 9699387 intergenic not near genes chr2R 9699456 intergenic not near genes chr2R 9699526 intergenic not near genes chr2R_19_9695001 chr2R_9695001 D17-c3 997 chr2R 9699436 9699440 chr2R 9699497 9699552 4 99 6.5 5.5 6.0 0.6 116 chr2R 9699436 intergenic not near genes chr2R 9699494 intergenic not near genes chr2R 9699552 intergenic not near genes chr2R_4_9695001 chr2R_9695001 D17-c3 998 chr2R 9707201 9707250 chr2R 9707322 9707371 38 119 11.0 18.5 14.8 2.4 170 chr2R 9707201 exon CG1773 + chr2R 9707286 exon CG1773 + chr2R 9707371 exon CG1773 + chr2R_38_9705001 chr2R_9705001 D17-c3 999 chr2R 9725026 9725079 chr2R 9725130 9725183 19 104 4.0 3.0 3.5 4.2 157 chr2R 9725026 intron sqa - chr2R 9725104 intron sqa - chr2R 9725183 intron sqa - chr2R_19_9725001 chr2R_9725001 D17-c3 1000 chr2R 9726592 9726640 chr2R 9734168 9734216 17.6 22 7576 7.5 12.0 9.8 2.0 7624 chr2R 9726592 intron sqa - chr2R 9730404 intron sqa - chr2R 9734216 intron sqa - chr2R_22_9730001 chr2R_9730001 D17-c3 1001 chr2R 9871044 9871073 chr2R 9871545 9871584 roo 13 510 0.5 11.5 6.0 1.9 540 chr2R 9871044 intron cbx - chr2R 9871314 intron cbx - chr2R 9871584 intron,5` UTR cbx -,CG18446 + chr2R_13_9870001 chr2R_9870001 D17-c3 1002 chr2R 9945413 9945444 chr2R 9945634 9945665 BS 11 219 15.5 3.5 9.5 1.0 252 chr2R 9945413 intron Mef2 - chr2R 9945539 intron Mef2 - chr2R 9945665 intron Mef2 - chr2R_11_9945001 chr2R_9945001 D17-c3 1003 chr2R 9945445 9945467 chr2R 9945632 9945688 BS 9 214 11.0 3.0 7.0 1.1 243 chr2R 9945445 intron Mef2 - chr2R 9945566 intron Mef2 - chr2R 9945688 intron Mef2 - chr2R_9_9945001 chr2R_9945001 D17-c3 1004 chr2R 9998077 9998091 chr2R 9998196 9998210 5 119 3.0 12.0 7.5 0.6 133 chr2R 9998077 intron Pka-R2 - chr2R 9998144 intron Pka-R2 - chr2R 9998210 intron Pka-R2 - chr2R_5_9995001 chr2R_9995001 D17-c3 1005 chr2R 10005533 10005576 chr2R 10005655 10005698 23 122 7.0 3.5 5.2 3.7 165 chr2R 10005533 intron Pka-R2 - chr2R 10005616 intron Pka-R2 - chr2R 10005698 intron Pka-R2 - chr2R_23_10005001 chr2R_10005001 D17-c3 1006 chr2R 10005827 10005877 chr2R 10007017 10007067 1360 35 1182 6.0 11.5 8.8 3.6 1240 chr2R 10005827 intron Pka-R2 - chr2R 10006447 intron Pka-R2 - chr2R 10007067 intron Pka-R2 - chr2R_35_10005001 chr2R_10005001 D17-c3 1007 chr2R 10008555 10008592 chr2R 10008657 10008705 6 104 0.5 0.5 0.5 4.0 150 chr2R 10008555 intron Pka-R2 - chr2R 10008630 intron Pka-R2 - chr2R 10008705 intron Pka-R2 - chr2R_6_10005001 chr2R_10005001 D17-c3 1008 chr2R 10047793 10047833 chr2R 10047901 10047941 8 108 2.5 5.5 4.0 1.6 148 chr2R 10047793 intron oys - chr2R 10047867 intron oys - chr2R 10047941 intron oys - chr2R_8_10045001 chr2R_10045001 D17-c3 1009 chr2R 10132168 10132220 chr2R 10132273 10132325 17 105 8.0 6.5 7.2 2.1 157 chr2R 10132168 intron gem + chr2R 10132246 intron gem + chr2R 10132325 exon gem + chr2R_17_10130001 chr2R_10130001 D17-c3 1010 chr2R 10167096 10167097 chr2R 10167193 10167198 5 99 26.0 20.0 23.0 0.2 102 chr2R 10167096 intron KCNQ - chr2R 10167147 intron KCNQ - chr2R 10167198 intron KCNQ - chr2R_5_10165001 chr2R_10165001 D17-c3 1011 chr2R 10167099 10167141 chr2R 10167189 10167231 30 98 19.0 20.0 19.5 1.5 132 chr2R 10167099 intron KCNQ - chr2R 10167165 intron KCNQ - chr2R 10167231 intron KCNQ - chr2R_30_10165001 chr2R_10165001 D17-c3 1012 chr2R 10168331 10168364 chr2R 10168433 10168466 5 100 3.0 7.0 5.0 0.8 135 chr2R 10168331 intron KCNQ - chr2R 10168398 intron KCNQ - chr2R 10168466 intron KCNQ - chr2R_5_10165001 chr2R_10165001 D17-c3 1013 chr2R 10171086 10171130 chr2R 10171195 10171239 14 108 3.5 7.0 5.2 2.3 153 chr2R 10171086 intron KCNQ - chr2R 10171162 intron KCNQ - chr2R 10171239 intron KCNQ - chr2R_14_10170001 chr2R_10170001 D17-c3 1014 chr2R 10172612 10172646 chr2R 10172749 10172783 13 137 15.0 1.0 8.0 1.4 171 chr2R 10172612 intron KCNQ - chr2R 10172698 intron KCNQ - chr2R 10172783 intron KCNQ - chr2R_13_10170001 chr2R_10170001 D17-c3 1015 chr2R 10176099 10176154 chr2R 10176203 10176251 26 103 4.0 7.0 5.5 4.0 152 chr2R 10176099 intron KCNQ - chr2R 10176175 intron KCNQ - chr2R 10176251 intron KCNQ - chr2R_26_10175001 chr2R_10175001 D17-c3 1016 chr2R 10176859 10176913 chr2R 10186051 10186105 roo 17 9191 3.0 4.5 3.8 3.5 9246 chr2R 10176859 intron KCNQ - chr2R 10181482 intron KCNQ - chr2R 10186105 intron KCNQ - chr2R_17_10180001 chr2R_10180001 D17-c3 1017 chr2R 10190417 10190451 chr2R 10190527 10190551 4 108 18.5 14.5 16.5 0.2 134 chr2R 10190417 intron KCNQ - chr2R 10190484 intron KCNQ - chr2R 10190551 intron KCNQ - chr2R_4_10190001 chr2R_10190001 D17-c3 1018 chr2R 10216164 10216222 chr2R 10216267 10216325 18 101 6.0 7.5 6.8 2.3 161 chr2R 10216164 intron,intron CG12912 -,Hr46 - chr2R 10216244 intron,intron CG12912 -,Hr46 - chr2R 10216325 intron,intron CG12912 -,Hr46 - chr2R_18_10215001 chr2R_10215001 D17-c3 1019 chr2R 10225708 10225751 chr2R 10225814 10225858 14 106 5.0 3.0 4.0 2.8 150 chr2R 10225708 intron,intron CG12912 -,Hr46 - chr2R 10225783 intron,intron CG12912 -,Hr46 - chr2R 10225858 intron,intron CG12912 -,Hr46 - chr2R_14_10225001 chr2R_10225001 D17-c3 1020 chr2R 10266470 10266531 chr2R 10266585 10266587 16 104 17.0 5.0 11.0 1.3 117 chr2R 10266470 intron CG12910 + chr2R 10266528 intron CG12910 + chr2R 10266587 intron CG12910 + chr2R_16_10265001 chr2R_10265001 D17-c3 1021 chr2R 10274810 10274825 chr2R 10274911 10274926 8 101 9.0 0.0 4.5 1.5 116 chr2R 10274810 intron CAP + chr2R 10274868 intron CAP + chr2R 10274926 intron CAP + chr2R_8_10270001 chr2R_10270001 D17-c3 1022 chr2R 10313298 10313348 chr2R 10313409 10313461 26 111 3.0 7.0 5.0 4.3 163 chr2R 10313298 intergenic not near genes chr2R 10313380 intergenic not near genes chr2R 10313461 intergenic Ndg + chr2R_26_10310001 chr2R_10310001 D17-c3 1023 chr2R 10322061 10322079 chr2R 10322162 10322186 8 106 2.0 8.0 5.0 1.3 125 chr2R 10322061 3` UTR Ndg + chr2R 10322124 intergenic Ndg + chr2R 10322186 intergenic Ndg + chr2R_8_10320001 chr2R_10320001 D17-c3 1024 chr2R 10352648 10352705 chr2R 10352750 10352807 24 101 3.5 4.0 3.8 5.0 159 chr2R 10352648 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352728 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352807 intron,exon,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R_24_10350001 chr2R_10350001 D17-c3 1025 chr2R 10354534 10354544 chr2R 10354645 10354655 4 111 8.5 8.0 8.2 0.4 121 chr2R 10354534 intron CG42732 - chr2R 10354594 intron CG42732 - chr2R 10354655 intron CG42732 - chr2R_4_10350001 chr2R_10350001 D17-c3 1026 chr2R 10354548 10354579 chr2R 10354638 10354690 13 109 3.5 7.5 5.5 2.0 142 chr2R 10354548 intron CG42732 - chr2R 10354619 intron CG42732 - chr2R 10354690 intron CG42732 - chr2R_13_10350001 chr2R_10350001 D17-c3 1027 chr2R 10363842 10363896 chr2R 10363946 10364000 23 104 7.5 6.5 7.0 2.9 158 chr2R 10363842 intron CG42732 - chr2R 10363921 intron CG42732 - chr2R 10364000 intron CG42732 - chr2R_23_10360001 chr2R_10360001 D17-c3 1028 chr2R 10374774 10374812 chr2R 10374878 10374916 22 103 1.5 16.5 9.0 2.2 142 chr2R 10374774 intron CG42732 - chr2R 10374845 intron CG42732 - chr2R 10374916 intron CG42732 - chr2R_22_10370001 chr2R_10370001 D17-c3 1029 chr2R 10376703 10376866 chr2R 10376856 10377013 17 149 0.0 0.0 0.0 17.0 310 chr2R 10376703 intron CG42732 - chr2R 10376858 intron CG42732 - chr2R 10377013 intron CG42732 - chr2R_17_10375001 chr2R_10375001 D17-c3 1030 chr2R 10387977 10387984 chr2R 10388099 10388106 5 122 0.0 19.0 9.5 0.5 129 chr2R 10387977 intron CG42732 - chr2R 10388042 intron CG42732 - chr2R 10388106 intron CG42732 - chr2R_5_10385001 chr2R_10385001 D17-c3 1031 chr2R 10387986 10388003 chr2R 10388073 10388125 7 117 0.0 9.0 4.5 1.3 139 chr2R 10387986 intron CG42732 - chr2R 10388056 intron CG42732 - chr2R 10388125 intron CG42732 - chr2R_7_10385001 chr2R_10385001 D17-c3 1032 chr2R 10411779 10411836 chr2R 10411886 10411943 16 107 3.0 6.5 4.8 2.8 164 chr2R 10411779 intron CG42732 - chr2R 10411861 intron CG42732 - chr2R 10411943 intron CG42732 - chr2R_16_10410001 chr2R_10410001 D17-c3 1033 chr2R 10417957 10417968 chr2R 10418078 10418078 4 124 0.0 17.5 8.8 0.4 121 chr2R 10417957 intergenic not near genes chr2R 10418018 intergenic not near genes chr2R 10418078 intergenic not near genes chr2R_4_10415001 chr2R_10415001 D17-c3 1034 chr2R 10428999 10429050 chr2R 10429101 10429146 23 101 7.0 5.0 6.0 3.3 147 chr2R 10428999 intergenic not near genes chr2R 10429072 intergenic not near genes chr2R 10429146 intergenic not near genes chr2R_23_10425001 chr2R_10425001 D17-c3 1035 chr2R 10548109 10548136 chr2R 10548209 10548237 13 100 3.0 8.5 5.8 1.9 128 chr2R 10548109 intergenic not near genes chr2R 10548173 intergenic not near genes chr2R 10548237 intergenic not near genes chr2R_13_10545001 chr2R_10545001 D17-c3 1036 chr2R 10558212 10558247 chr2R 10558307 10558344 25 97 9.0 18.0 13.5 1.7 132 chr2R 10558212 5` UTR psq + chr2R 10558278 5` UTR psq + chr2R 10558344 5` UTR psq + chr2R_25_10555001 chr2R_10555001 D17-c3 1037 chr2R 10561122 10561173 chr2R 10561274 10561325 5 152 1.0 3.5 2.2 1.6 203 chr2R 10561122 intron psq + chr2R 10561224 intron psq + chr2R 10561325 intron psq + chr2R_5_10560001 chr2R_10560001 D17-c3 1038 chr2R 10563909 10563921 chr2R 10564125 10564136 6 216 0.0 8.5 4.2 1.2 227 chr2R 10563909 intron psq + chr2R 10564022 intron psq + chr2R 10564136 intron psq + chr2R_6_10560001 chr2R_10560001 D17-c3 1039 chr2R 10574603 10574634 chr2R 10574710 10574741 9 107 10.0 12.5 11.2 0.7 138 chr2R 10574603 intron psq + chr2R 10574672 intron psq + chr2R 10574741 intron psq + chr2R_9_10570001 chr2R_10570001 D17-c3 1040 chr2R 10585573 10585582 chr2R 10594181 10594190 Tirant 8 8608 10.5 11.0 10.8 0.7 8617 chr2R 10585573 intron psq + chr2R 10589882 intron psq + chr2R 10594190 intron psq + chr2R_8_10585001 chr2R_10585001 D17-c3 1041 chr2R 10622339 10622355 chr2R 10637129 10637145 mdg1 7 14790 7.5 3.5 5.5 1.1 14806 chr2R 10622339 intron CG11883 + chr2R 10629742 intron CG11883 + chr2R 10637145 intron CG11883 + chr2R_7_10625001 chr2R_10625001 D17-c3 1042 chr2R 10644036 10644086 chr2R 10644139 10644189 19 103 2.0 0.0 1.0 9.5 153 chr2R 10644036 intron Git - chr2R 10644112 intron Git - chr2R 10644189 intron Git - chr2R_19_10640001 chr2R_10640001 D17-c3 1043 chr2R 10653179 10653218 chr2R 10653284 10653322 9 102 6.0 5.5 5.8 1.3 143 chr2R 10653179 intergenic not near genes chr2R 10653250 intergenic not near genes chr2R 10653322 intergenic not near genes chr2R_9_10650001 chr2R_10650001 D17-c3 1044 chr2R 10781372 10781426 chr2R 10781757 10781810 17 380 10.5 5.0 7.8 1.9 438 chr2R 10781372 intron CG33144 - chr2R 10781591 intron CG33144 - chr2R 10781810 intron CG33144 - chr2R_17_10780001 chr2R_10780001 D17-c3 1045 chr2R 10790123 10790171 chr2R 10790236 10790284 23 112 5.5 7.5 6.5 3.1 161 chr2R 10790123 intron CG33144 - chr2R 10790204 intron CG33144 - chr2R 10790284 intron CG33144 - chr2R_23_10790001 chr2R_10790001 D17-c3 1046 chr2R 10827309 10827362 chr2R 10827422 10827475 21 113 9.0 6.5 7.8 2.4 166 chr2R 10827309 exon CG12325 + chr2R 10827392 3` UTR CG12325 + chr2R 10827475 3` UTR,3` UTR CG12325 +,CG12344 - chr2R_21_10825001 chr2R_10825001 D17-c3 1047 chr2R 10860579 10860586 chr2R 10860680 10860687 6 101 0.0 0.0 0.0 6.0 108 chr2R 10860579 intron CG30015 - chr2R 10860633 intron CG30015 - chr2R 10860687 intron CG30015 - chr2R_6_10860001 chr2R_10860001 D17-c3 1048 chr2R 10922767 10922787 chr2R 10922878 10922898 6 111 1.5 8.0 4.8 1.0 131 chr2R 10922767 intergenic not near genes chr2R 10922832 intergenic not near genes chr2R 10922898 intergenic not near genes chr2R_6_10920001 chr2R_10920001 D17-c3 1049 chr2R 10959072 10959107 chr2R 10959176 10959211 9 102 2.0 7.5 4.8 1.6 139 chr2R 10959072 intergenic not near genes chr2R 10959142 intergenic not near genes chr2R 10959211 intergenic not near genes chr2R_9_10955001 chr2R_10955001 D17-c3 1050 chr2R 10967231 10967285 chr2R 10967411 10967464 8 180 4.5 0.5 2.5 2.3 233 chr2R 10967231 intergenic not near genes chr2R 10967348 intergenic not near genes chr2R 10967464 intergenic not near genes chr2R_8_10965001 chr2R_10965001 D17-c3 1051 chr2R 10979646 10979686 chr2R 10980141 10980178 297 9 493 3.5 4.0 3.8 1.9 532 chr2R 10979646 intergenic not near genes chr2R 10979912 intergenic not near genes chr2R 10980178 intergenic not near genes chr2R_9_10975001 chr2R_10975001 D17-c3 1052 chr2R 11009798 11009847 chr2R 11018997 11019024 roo 10 9196 6.5 6.5 6.5 1.3 9226 chr2R 11009798 intron luna - chr2R 11014411 intron luna - chr2R 11019024 intron luna - chr2R_10_11010001 chr2R_11010001 D17-c3 1053 chr2R 11019857 11019907 chr2R 11024948 11024971 jockey 12 5086 5.5 5.5 5.5 1.8 5114 chr2R 11019857 intron luna - chr2R 11022414 intron luna - chr2R 11024971 intron luna - chr2R_12_11020001 chr2R_11020001 D17-c3 1054 chr2R 11134085 11134142 chr2R 11134351 11134408 pogo 26 265 4.5 4.0 4.2 5.0 323 chr2R 11134085 intergenic not near genes chr2R 11134246 intergenic not near genes chr2R 11134408 intergenic not near genes chr2R_26_11130001 chr2R_11130001 D17-c3 1055 chr2R 11179260 11179285 chr2R 11179371 11179396 12 111 0.0 19.0 9.5 1.1 136 chr2R 11179260 intron shn + chr2R 11179328 intron shn + chr2R 11179396 intron shn + chr2R_12_11175001 chr2R_11175001 D17-c3 1056 chr2R 11207792 11207843 chr2R 11208009 11208060 BS 25 217 8.5 8.0 8.2 2.7 268 chr2R 11207792 intron shn + chr2R 11207926 intron shn + chr2R 11208060 intron shn + chr2R_25_11205001 chr2R_11205001 D17-c3 1057 chr2R 11253210 11253264 chr2R 11253311 11253360 44 100 18.5 18.5 18.5 2.3 150 chr2R 11253210 intron Cpr47Ea - chr2R 11253285 intron Cpr47Ea - chr2R 11253360 5` UTR Cpr47Ea - chr2R_44_11250001 chr2R_11250001 D17-c3 1058 chr2R 11262169 11262223 chr2R 11262282 11262336 40 107 8.0 5.5 6.8 5.1 167 chr2R 11262169 intergenic Cpr47Ed - chr2R 11262252 intergenic Cpr47Ed - chr2R 11262336 intergenic not near genes chr2R_40_11260001 chr2R_11260001 D17-c3 1059 chr2R 11276784 11276819 chr2R 11276977 11276996 21 192 4.0 10.0 7.0 2.6 212 chr2R 11276784 intergenic not near genes chr2R 11276890 intergenic not near genes chr2R 11276996 intergenic not near genes chr2R_21_11275001 chr2R_11275001 D17-c3 1060 chr2R 11297591 11297649 chr2R 11301937 11301995 flea 12 4346 10.5 2.0 6.2 1.7 4404 chr2R 11297591 intergenic CG42336 - chr2R 11299793 intergenic not near genes chr2R 11301995 5` UTR CG7741 + chr2R_12_11295001 chr2R_11295001 D17-c3 1061 chr2R 11415496 11415549 chr2R 11418670 11418723 opus 22 3172 4.0 6.5 5.2 3.5 3227 chr2R 11415496 intron Drip - chr2R 11417110 intron Drip - chr2R 11418723 intron Drip - chr2R_22_11415001 chr2R_11415001 D17-c3 1062 chr2R 11472624 11472680 chr2R 11473846 11473902 pogo 33 1222 6.5 8.0 7.2 4.0 1278 chr2R 11472624 intergenic not near genes chr2R 11473263 intergenic not near genes chr2R 11473902 intergenic not near genes chr2R_33_11470001 chr2R_11470001 D17-c3 1063 chr2R 11631375 11631410 chr2R 11631480 11631515 14 105 0.5 7.0 3.8 2.9 140 chr2R 11631375 intron CG9005 - chr2R 11631445 intron CG9005 - chr2R 11631515 intron CG9005 - chr2R_14_11630001 chr2R_11630001 D17-c3 1064 chr2R 11660345 11660398 chr2R 11660487 11660540 16 142 0.0 4.0 2.0 5.3 195 chr2R 11660345 intron Roc2 - chr2R 11660442 intron Roc2 - chr2R 11660540 intron Roc2 - chr2R_16_11660001 chr2R_11660001 D17-c3 1065 chr2R 11672827 11672847 chr2R 11672939 11672959 15 112 12.5 7.5 10.0 1.4 132 chr2R 11672827 intron,exon Roc2 -,Tret1-1 + chr2R 11672893 intron,intron Roc2 -,Tret1-1 + chr2R 11672959 intron,intron Roc2 -,Tret1-1 + chr2R_15_11670001 chr2R_11670001 D17-c3 1066 chr2R 11787416 11787470 chr2R 11787527 11787581 16 107 6.5 5.0 5.8 2.4 165 chr2R 11787416 intron ths + chr2R 11787498 intron ths + chr2R 11787581 intron ths + chr2R_16_11785001 chr2R_11785001 D17-c3 1067 chr2R 11792985 11792992 chr2R 11793095 11793102 6 110 11.5 0.5 6.0 0.9 117 chr2R 11792985 intron ths + chr2R 11793044 intron ths + chr2R 11793102 intron ths + chr2R_6_11790001 chr2R_11790001 D17-c3 1068 chr2R 11830780 11830820 chr2R 11830890 11830929 22 109 7.0 9.5 8.2 2.4 149 chr2R 11830780 intron Sobp - chr2R 11830854 intron Sobp - chr2R 11830929 intron Sobp - chr2R_22_11830001 chr2R_11830001 D17-c3 1069 chr2R 11861972 11862019 chr2R 11862082 11862129 14 110 4.5 3.5 4.0 2.8 157 chr2R 11861972 3` UTR CG34230 + chr2R 11862050 intergenic CG34230 +,TwdlBeta - chr2R 11862129 intergenic CG34230 +,TwdlBeta - chr2R_14_11860001 chr2R_11860001 D17-c3 1070 chr2R 11951388 11951421 chr2R 11951623 11951657 9 235 4.5 11.0 7.8 1.0 269 chr2R 11951388 intron CG13188 + chr2R 11951522 intron CG13188 + chr2R 11951657 intron CG13188 + chr2R_9_11950001 chr2R_11950001 D17-c3 1071 chr2R 12016797 12016841 chr2R 12016899 12016949 13 106 2.5 6.5 4.5 2.4 152 chr2R 12016797 intron otk - chr2R 12016873 intron otk - chr2R 12016949 intron otk - chr2R_13_12015001 chr2R_12015001 D17-c3 1072 chr2R 8518785 8518804 chr2R 12066154 12066173 10 3547369 13.0 28.0 20.5 0.5 3547388 chr2R 8518785 intron mtt - chr2R 10292479 intron CAP + chr2R 12066173 intron CG8888 - chr2R_10_10290001 chr2R_10290001 D17-c3 1073 chr2R 12139916 12139974 chr2R 12140029 12140086 31 112 5.5 9.5 7.5 3.6 170 chr2R 12139916 exon skpB - chr2R 12140001 5` UTR skpB - chr2R 12140086 5` UTR skpB - chr2R_31_12140001 chr2R_12140001 D17-c3 1074 chr2R 12200943 12200997 chr2R 12201097 12201151 10 154 7.0 5.5 6.2 1.4 208 chr2R 12200943 intergenic RpS11 - chr2R 12201047 intergenic RpS11 - chr2R 12201151 intergenic RpS11 - chr2R_10_12200001 chr2R_12200001 D17-c3 1075 chr2R 12236185 12236201 chr2R 12236317 12236333 8 132 13.5 3.0 8.2 0.9 148 chr2R 12236185 intergenic not near genes chr2R 12236259 intergenic not near genes chr2R 12236333 intergenic not near genes chr2R_8_12235001 chr2R_12235001 D17-c3 1076 chr2R 12334867 12334879 chr2R 12334970 12334982 4 103 7.5 9.5 8.5 0.4 115 chr2R 12334867 intergenic CG8490 + chr2R 12334924 intergenic CG8490 + chr2R 12334982 intergenic CG8490 + chr2R_4_12330001 chr2R_12330001 D17-c3 1077 chr2R 12355754 12355810 chr2R 12355861 12355919 31 109 6.0 4.0 5.0 5.2 165 chr2R 12355754 intron CG30049 + chr2R 12355836 exon CG30049 + chr2R 12355919 exon CG30049 + chr2R_31_12355001 chr2R_12355001 D17-c3 1078 chr2R 12370980 12370999 chr2R 12371188 12371207 13 207 5.5 8.5 7.0 1.6 227 chr2R 12370980 intergenic CG33012 + chr2R 12371094 intergenic CG33012 +,CG13160 + chr2R 12371207 intergenic CG33012 +,CG13160 + chr2R_13_12370001 chr2R_12370001 D17-c3 1079 chr2R 12481142 12481164 chr2R 12482956 12482993 roo 14 1826 12.5 15.0 13.8 0.9 1851 chr2R 12481142 exon Dh44-R2 + chr2R 12482068 intron Dh44-R2 + chr2R 12482993 intron Dh44-R2 + chr2R_14_12480001 chr2R_12480001 D17-c3 1080 chr2R 12501671 12501721 chr2R 12503858 12503900 Rt1c 15 2184 6.5 7.5 7.0 1.9 2229 chr2R 12501671 intron fdl - chr2R 12502786 intron fdl - chr2R 12503900 intron fdl - chr2R_15_12500001 chr2R_12500001 D17-c3 1081 chr2R 12540450 12540497 chr2R 12540558 12540573 27 100 12.5 6.0 9.2 2.6 123 chr2R 12540450 intron fra + chr2R 12540512 intron fra + chr2R 12540573 intron fra + chr2R_27_12540001 chr2R_12540001 D17-c3 1082 chr2R 12552519 12552567 chr2R 12552695 12552749 19 179 10.5 7.0 8.8 1.9 230 chr2R 12552519 intron fra + chr2R 12552634 intron fra + chr2R 12552749 intron fra + chr2R_19_12550001 chr2R_12550001 D17-c3 1083 chr2R 12553912 12553943 chr2R 12554013 12554044 7 101 4.5 8.0 6.2 1.0 132 chr2R 12553912 intron fra + chr2R 12553978 intron fra + chr2R 12554044 intron fra + chr2R_7_12550001 chr2R_12550001 D17-c3 1084 chr2R 12565126 12565179 chr2R 12565232 12565285 15 106 4.0 1.5 2.8 3.9 159 chr2R 12565126 intergenic CG33775 - chr2R 12565206 intergenic CG33775 - chr2R 12565285 intergenic CG33775 - chr2R_15_12565001 chr2R_12565001 D17-c3 1085 chr2R 12565540 12565592 chr2R 12565935 12565987 9 395 3.5 5.0 4.2 1.7 447 chr2R 12565540 intergenic not near genes chr2R 12565764 intergenic Cyp301a1 + chr2R 12565987 intergenic Cyp301a1 + chr2R_9_12565001 chr2R_12565001 D17-c3 1086 chr2R 12602782 12602836 chr2R 12602891 12602945 13 109 3.0 6.0 4.5 2.4 163 chr2R 12602782 intron Amph + chr2R 12602864 intron Amph + chr2R 12602945 intron Amph + chr2R_13_12600001 chr2R_12600001 D17-c3 1087 chr2R 12643763 12643817 chr2R 12643864 12643897 19 99 2.5 0.5 1.5 7.6 134 chr2R 12643763 intron CG8785 - chr2R 12643830 intron CG8785 - chr2R 12643897 exon CG8785 - chr2R_19_12640001 chr2R_12640001 D17-c3 1088 chr2R 12700791 12700848 chr2R 12700910 12700952 29 115 9.0 9.0 9.0 2.9 161 chr2R 12700791 3` UTR wuc + chr2R 12700872 intergenic wuc + chr2R 12700952 intergenic wuc + chr2R_29_12700001 chr2R_12700001 D17-c3 1089 chr2R 12702301 12702337 chr2R 12702407 12702444 8 106 6.0 5.5 5.8 1.2 143 chr2R 12702301 intergenic not near genes chr2R 12702372 intergenic not near genes chr2R 12702444 intergenic not near genes chr2R_8_12700001 chr2R_12700001 D17-c3 1090 chr2R 12707511 12707549 chr2R 12715902 12715940 roo 11 8391 1.0 4.0 2.5 3.1 8429 chr2R 12707511 intron CG42663 + chr2R 12711726 intron CG42663 + chr2R 12715940 intron CG42663 + chr2R_11_12710001 chr2R_12710001 D17-c3 1091 chr2R 12739112 12739155 chr2R 12739213 12739256 17 100 9.5 7.5 8.5 1.8 144 chr2R 12739112 intron CG42663 + chr2R 12739184 intron CG42663 + chr2R 12739256 intron CG42663 + chr2R_17_12735001 chr2R_12735001 D17-c3 1092 chr2R 12777799 12777801 chr2R 12777921 12777924 4 123 0.0 7.0 3.5 0.9 125 chr2R 12777799 5` UTR CR45266 + chr2R 12777862 5` UTR CR45266 + chr2R 12777924 5` UTR CR45266 + chr2R_4_12775001 chr2R_12775001 D17-c3 1093 chr2R 12789284 12789320 chr2R 12797655 12797708 roo 14 8384 5.0 4.5 4.8 2.4 8424 chr2R 12789284 intron,3` UTR sca +,CR45137 - chr2R 12793496 intron,intron sca +,CR45137 - chr2R 12797708 intron,3` UTR sca +,CR45137 - chr2R_14_12790001 chr2R_12790001 D17-c3 1094 chr2R 12819137 12819181 chr2R 12819286 12819326 7 146 1.0 4.0 2.5 2.0 189 chr2R 12819137 intergenic not near genes chr2R 12819232 intergenic not near genes chr2R 12819326 intergenic not near genes chr2R_7_12815001 chr2R_12815001 D17-c3 1095 chr2R 12819442 12819479 chr2R 12824525 12824567 jockey 22 5085 4.0 12.5 8.2 2.4 5125 chr2R 12819442 intergenic not near genes chr2R 12822004 intergenic not near genes chr2R 12824567 intergenic not near genes chr2R_22_12820001 chr2R_12820001 D17-c3 1096 chr2R 12845389 12845440 chr2R 12845495 12845542 7 104 7.0 2.5 4.8 1.2 153 chr2R 12845389 intergenic CG17575 - chr2R 12845466 intergenic CG17575 - chr2R 12845542 intergenic CG17575 - chr2R_7_12845001 chr2R_12845001 D17-c3 1097 chr2R 12897460 12897481 chr2R 12897576 12897597 18 116 7.5 4.5 6.0 2.6 137 chr2R 12897460 intron vg + chr2R 12897528 intron vg + chr2R 12897597 intron vg + chr2R_18_12895001 chr2R_12895001 D17-c3 1098 chr2R 12915800 12915824 chr2R 12915920 12915944 6 120 9.5 6.5 8.0 0.7 144 chr2R 12915800 intergenic NAT1 + chr2R 12915872 intergenic NAT1 + chr2R 12915944 intergenic NAT1 + chr2R_6_12915001 chr2R_12915001 D17-c3 1099 chr2R 12915826 12915843 chr2R 12915919 12915962 10 114 6.5 6.0 6.2 1.4 136 chr2R 12915826 intergenic NAT1 + chr2R 12915894 intergenic NAT1 + chr2R 12915962 intergenic NAT1 + chr2R_10_12915001 chr2R_12915001 D17-c3 1100 chr2R 12952823 12952842 chr2R 12952932 12952951 4 109 0.0 5.0 2.5 1.1 128 chr2R 12952823 intergenic CG13321 + chr2R 12952887 intergenic CG13321 + chr2R 12952951 intergenic CG13321 + chr2R_4_12950001 chr2R_12950001 D17-c3 1101 chr2R 12988226 12988428 chr2R 12988363 12988557 20 133 0.0 0.0 0.0 20.0 331 chr2R 12988226 intergenic not near genes chr2R 12988392 intergenic not near genes chr2R 12988557 intergenic not near genes chr2R_20_12985001 chr2R_12985001 D17-c3 1102 chr2R 13089049 13089108 chr2R 13089207 13089267 25 156 5.0 8.0 6.5 3.3 218 chr2R 13089049 intergenic not near genes chr2R 13089158 intergenic not near genes chr2R 13089267 intergenic not near genes chr2R_25_13085001 chr2R_13085001 D17-c3 1103 chr2R 13125683 13125707 chr2R 13125791 13125815 7 107 5.5 4.0 4.8 1.2 132 chr2R 13125683 exon CG13325 + chr2R 13125749 3` UTR CG13325 + chr2R 13125815 intergenic CG13325 + chr2R_7_13125001 chr2R_13125001 D17-c3 1104 chr2R 13136819 13136862 chr2R 13141642 13141685 Doc 37 4822 9.5 11.0 10.2 3.3 4866 chr2R 13136819 exon Cap-G + chr2R 13139252 intron Cap-G + chr2R 13141685 intron Cap-G + chr2R_37_13135001 chr2R_13135001 D17-c3 1105 chr2R 13194824 13194854 chr2R 13194946 13194971 15 117 36.0 20.5 28.2 0.5 147 chr2R 13194824 intergenic not near genes chr2R 13194898 intergenic not near genes chr2R 13194971 intergenic not near genes chr2R_15_13190001 chr2R_13190001 D17-c3 1106 chr2R 13220516 13220552 chr2R 13220619 13220676 4 119 0.0 5.5 2.8 1.1 160 chr2R 13220516 intron CG17059 + chr2R 13220596 intron CG17059 + chr2R 13220676 intron CG17059 + chr2R_4_13220001 chr2R_13220001 D17-c3 1107 chr2R 13309651 13309682 chr2R 13309794 13309825 16 143 3.0 7.5 5.2 2.6 174 chr2R 13309651 intergenic not near genes chr2R 13309738 intergenic not near genes chr2R 13309825 intergenic not near genes chr2R_16_13305001 chr2R_13305001 D17-c3 1108 chr2R 13351626 13351666 chr2R 13352744 13352784 19 1116 78.0 31.5 54.8 0.3 1158 chr2R 13351626 intron CR44206 - chr2R 13352205 intron CR44206 - chr2R 13352784 intron CR44206 - chr2R_19_13350001 chr2R_13350001 D17-c3 1109 chr2R 13376629 13376639 chr2R 13376764 13376774 4 135 4.5 15.0 9.8 0.4 145 chr2R 13376629 intron CG10814 - chr2R 13376702 intron CG10814 - chr2R 13376774 intron CG10814 - chr2R_4_13375001 chr2R_13375001 D17-c3 1110 chr2R 13403896 13403938 chr2R 13404006 13404048 11 110 3.5 1.5 2.5 3.1 152 chr2R 13403896 intergenic not near genes chr2R 13403972 intergenic not near genes chr2R 13404048 intergenic not near genes chr2R_11_13400001 chr2R_13400001 D17-c3 1111 chr2R 13431465 13431517 chr2R 13431569 13431621 15 104 7.0 5.0 6.0 2.1 156 chr2R 13431465 intron CG42321 - chr2R 13431543 intron CG42321 - chr2R 13431621 intron CG42321 - chr2R_15_13430001 chr2R_13430001 D17-c3 1112 chr2R 13475943 13475954 chr2R 13476054 13476065 4 111 3.0 6.0 4.5 0.7 122 chr2R 13475943 intron arr - chr2R 13476004 intron arr - chr2R 13476065 intron arr - chr2R_4_13475001 chr2R_13475001 D17-c3 1113 chr2R 13475965 13475981 chr2R 13476051 13476051 5 98 2.5 6.0 4.2 1.0 86 chr2R 13475965 intron arr - chr2R 13476008 intron arr - chr2R 13476051 intron arr - chr2R_5_13475001 chr2R_13475001 D17-c3 1114 chr2R 13480117 13480147 chr2R 13480221 13480251 11 102 2.5 10.0 6.2 1.5 134 chr2R 13480117 intron arr - chr2R 13480184 intron arr - chr2R 13480251 intron arr - chr2R_11_13480001 chr2R_13480001 D17-c3 1115 chr2R 13547056 13547107 chr2R 13547276 13547327 17 219 6.0 3.5 4.8 2.9 271 chr2R 13547056 intron CG6145 - chr2R 13547192 intron CG6145 - chr2R 13547327 intron CG6145 - chr2R_17_13545001 chr2R_13545001 D17-c3 1116 chr2R 13554755 13554770 chr2R 13554865 13554879 8 110 2.0 10.0 6.0 1.1 124 chr2R 13554755 intron Roe1 + chr2R 13554817 intron Roe1 + chr2R 13554879 intron Roe1 + chr2R_8_13550001 chr2R_13550001 D17-c3 1117 chr2R 13566234 13566274 chr2R 13566339 13566379 14 104 9.0 1.0 5.0 2.3 145 chr2R 13566234 intergenic not near genes chr2R 13566306 intergenic not near genes chr2R 13566379 intergenic not near genes chr2R_14_13565001 chr2R_13565001 D17-c3 1118 chr2R 13580474 13580527 chr2R 13580849 13580902 jockey 19 375 7.5 13.0 10.2 1.7 428 chr2R 13580474 3` UTR CG6191 - chr2R 13580688 3` UTR,3` UTR CG6191 -,CG45088 - chr2R 13580902 3` UTR,3` UTR CG6191 -,CG45088 - chr2R_19_13580001 chr2R_13580001 D17-c3 1119 chr2R 13601508 13601539 chr2R 13601610 13601641 12 100 13.5 12.0 12.8 0.9 133 chr2R 13601508 intergenic CG43058 - chr2R 13601574 intergenic CG43058 - chr2R 13601641 intergenic not near genes chr2R_12_13600001 chr2R_13600001 D17-c3 1120 chr2R 13632286 13632313 chr2R 13632399 13632426 12 113 18.5 14.5 16.5 0.7 140 chr2R 13632286 intron fas + chr2R 13632356 intron fas + chr2R 13632426 intron fas + chr2R_12_13630001 chr2R_13630001 D17-c3 1121 chr2R 13677853 13677858 chr2R 13677958 13677963 5 105 10.5 22.5 16.5 0.3 110 chr2R 13677853 intron fas + chr2R 13677908 intron fas + chr2R 13677963 intron fas + chr2R_5_13675001 chr2R_13675001 D17-c3 1122 chr2R 13709822 13709854 chr2R 13709940 13709972 12 118 4.0 7.5 5.8 1.8 150 chr2R 13709822 intron fas + chr2R 13709897 intron fas + chr2R 13709972 intron fas + chr2R_12_13705001 chr2R_13705001 D17-c3 1123 chr2R 13721179 13721228 chr2R 13721287 13721336 25 108 21.5 12.0 16.8 1.4 157 chr2R 13721179 intron fas + chr2R 13721258 intron fas + chr2R 13721336 intron fas + chr2R_25_13720001 chr2R_13720001 D17-c3 1124 chr2R 13727831 13727845 chr2R 13727942 13727956 4 111 6.5 15.0 10.8 0.3 125 chr2R 13727831 intron fas + chr2R 13727894 intron fas + chr2R 13727956 intron fas + chr2R_4_13725001 chr2R_13725001 D17-c3 1125 chr2R 13728108 13728155 chr2R 13735790 13735837 opus 11 7682 6.5 4.5 5.5 1.7 7729 chr2R 13728108 intron fas + chr2R 13731972 intron fas + chr2R 13735837 intron fas + chr2R_11_13730001 chr2R_13730001 D17-c3 1126 chr2R 13801460 13801506 chr2R 13801560 13801608 18 103 9.0 5.5 7.2 2.2 148 chr2R 13801460 intron Cpr50Cb + chr2R 13801534 intron Cpr50Cb + chr2R 13801608 intron Cpr50Cb + chr2R_18_13800001 chr2R_13800001 D17-c3 1127 chr2R 13861416 13861457 chr2R 13861520 13861555 16 104 9.5 8.5 9.0 1.6 139 chr2R 13861416 intron CG16935 - chr2R 13861486 intron CG16935 - chr2R 13861555 intron CG16935 - chr2R_16_13860001 chr2R_13860001 D17-c3 1128 chr2R 13868882 13868891 chr2R 13868986 13868995 6 104 4.5 8.5 6.5 0.8 113 chr2R 13868882 intron shot - chr2R 13868938 intron shot - chr2R 13868995 intron shot - chr2R_6_13865001 chr2R_13865001 D17-c3 1129 chr2R 13868892 13868929 chr2R 13868971 13869033 14 101 5.5 6.0 5.8 2.1 141 chr2R 13868892 intron shot - chr2R 13868962 intron shot - chr2R 13869033 intron shot - chr2R_14_13865001 chr2R_13865001 D17-c3 1130 chr2R 13905585 13905629 chr2R 13907592 13907636 Rt1a 26 2006 10.5 18.5 14.5 1.7 2051 chr2R 13905585 intron shot - chr2R 13906610 intron shot - chr2R 13907636 intron shot - chr2R_26_13905001 chr2R_13905001 D17-c3 1131 chr2R 13925881 13925890 chr2R 13926042 13926051 5 161 7.0 9.5 8.2 0.5 170 chr2R 13925881 intron shot - chr2R 13925966 intron shot - chr2R 13926051 intron shot - chr2R_5_13925001 chr2R_13925001 D17-c3 1132 chr2R 14003957 14004000 chr2R 14004245 14004288 7 288 2.0 3.5 2.8 1.8 331 chr2R 14003957 intron mam + chr2R 14004122 intron mam + chr2R 14004288 intron mam + chr2R_7_14000001 chr2R_14000001 D17-c3 1133 chr2R 14018140 14018170 chr2R 14018249 14018279 7 109 6.0 8.0 7.0 0.9 139 chr2R 14018140 intron mam + chr2R 14018210 intron mam + chr2R 14018279 intron mam + chr2R_7_14015001 chr2R_14015001 D17-c3 1134 chr2R 14093411 14093421 chr2R 14109587 14109597 4 16176 10.0 0.5 5.2 0.6 16186 chr2R 14093411 intron Prosap - chr2R 14101504 intron Prosap - chr2R 14109597 intron Prosap - chr2R_4_14100001 chr2R_14100001 D17-c3 1135 chr2R 14168341 14168385 chr2R 14168455 14168489 9 112 3.0 3.0 3.0 2.2 148 chr2R 14168341 intergenic CG18327 +,CG18324 + chr2R 14168415 intergenic CG18327 +,CG18324 +,CR44368 - chr2R 14168489 intergenic CG18327 +,CG18324 +,CR44368 - chr2R_9_14165001 chr2R_14165001 D17-c3 1136 chr2R 14277555 14277595 chr2R 14277662 14277702 18 106 9.0 6.0 7.5 2.1 147 chr2R 14277555 5` UTR Ih + chr2R 14277628 5` UTR Ih + chr2R 14277702 5` UTR Ih + chr2R_18_14275001 chr2R_14275001 D17-c3 1137 chr2R 14285028 14285050 chr2R 14285150 14285172 14 122 4.0 5.0 4.5 2.5 144 chr2R 14285028 intron Ih + chr2R 14285100 intron Ih + chr2R 14285172 intron Ih + chr2R_14_14285001 chr2R_14285001 D17-c3 1138 chr2R 14294804 14294861 chr2R 14294909 14294949 33 104 10.5 10.5 10.5 2.9 145 chr2R 14294804 intron Ih + chr2R 14294876 intron Ih + chr2R 14294949 intron Ih + chr2R_33_14290001 chr2R_14290001 D17-c3 1139 chr2R 14357531 14357576 chr2R 14357646 14357680 15 111 4.0 6.0 5.0 2.5 149 chr2R 14357531 intergenic CG8617 -,Arc1 - chr2R 14357606 intergenic Arc1 -,CG8617 - chr2R 14357680 intergenic Arc1 -,CG8617 - chr2R_15_14355001 chr2R_14355001 D17-c3 1140 chr2R 14467286 14467319 chr2R 14476469 14476502 roo 13 9183 3.5 8.5 6.0 1.9 9216 chr2R 14467286 intergenic not near genes chr2R 14471894 intergenic not near genes chr2R 14476502 5` UTR CR44462 + chr2R_13_14470001 chr2R_14470001 D17-c3 1141 chr2R 14497362 14497395 chr2R 14498550 14498586 1360 9 1188 3.5 5.0 4.2 1.7 1224 chr2R 14497362 3` UTR Cpsf160 - chr2R 14497974 intron Cpsf160 - chr2R 14498586 3` UTR Cpsf160 - chr2R_9_14495001 chr2R_14495001 D17-c3 1142 chr2R 14514461 14514498 chr2R 14514582 14514605 8 119 6.5 7.5 7.0 1.0 144 chr2R 14514461 intron,intron Cpr51A -,CG30197 + chr2R 14514533 intron,intron Cpr51A -,CG30197 + chr2R 14514605 intron,intron Cpr51A -,CG30197 + chr2R_8_14510001 chr2R_14510001 D17-c3 1143 chr2R 14524827 14524876 chr2R 14524949 14524958 12 117 10.0 4.0 7.0 1.5 131 chr2R 14524827 intergenic not near genes chr2R 14524892 intergenic not near genes chr2R 14524958 intergenic not near genes chr2R_12_14520001 chr2R_14520001 D17-c3 1144 chr2R 14530340 14530379 chr2R 14530454 14530493 8 109 12.0 4.0 8.0 0.9 153 chr2R 14530340 intron ttv + chr2R 14530416 intron ttv + chr2R 14530493 intron ttv + chr2R_8_14530001 chr2R_14530001 D17-c3 1145 chr2R 14530718 14530774 chr2R 14530825 14530881 31 106 4.0 6.0 5.0 5.2 163 chr2R 14530718 intron ttv + chr2R 14530800 intron ttv + chr2R 14530881 intron ttv + chr2R_31_14530001 chr2R_14530001 D17-c3 1146 chr2R 14533754 14533762 chr2R 14533861 14533869 4 107 10.0 3.0 6.5 0.5 115 chr2R 14533754 intron ttv + chr2R 14533812 intron ttv + chr2R 14533869 intron ttv + chr2R_4_14530001 chr2R_14530001 D17-c3 1147 chr2R 14707042 14707092 chr2R 14707147 14707197 9 105 5.5 2.0 3.8 1.9 155 chr2R 14707042 intron mspo - chr2R 14707120 intron mspo - chr2R 14707197 intron mspo - chr2R_9_14705001 chr2R_14705001 D17-c3 1148 chr2R 14722288 14722301 chr2R 14722416 14722430 6 129 10.0 20.0 15.0 0.4 142 chr2R 14722288 intergenic not near genes chr2R 14722359 intergenic not near genes chr2R 14722430 intergenic not near genes chr2R_6_14720001 chr2R_14720001 D17-c3 1149 chr2R 14729933 14729990 chr2R 14730042 14730099 15 108 1.0 7.5 4.2 2.9 166 chr2R 14729933 intergenic not near genes chr2R 14730016 intergenic not near genes chr2R 14730099 intergenic not near genes chr2R_15_14730001 chr2R_14730001 D17-c3 1150 chr2R 14760199 14760225 chr2R 14760308 14760334 7 109 3.0 1.5 2.2 2.2 135 chr2R 14760199 3` UTR Spred - chr2R 14760266 3` UTR Spred - chr2R 14760334 3` UTR Spred - chr2R_7_14760001 chr2R_14760001 D17-c3 1151 chr2R 14780410 14780453 chr2R 14780571 14780614 27 161 7.5 9.0 8.2 2.9 204 chr2R 14780410 intron kn - chr2R 14780512 intron kn - chr2R 14780614 intron kn - chr2R_27_14780001 chr2R_14780001 D17-c3 1152 chr2R 14799865 14799892 chr2R 14799966 14799993 10 101 2.0 9.5 5.8 1.5 128 chr2R 14799865 intron kn - chr2R 14799929 intron kn - chr2R 14799993 intron kn - chr2R_10_14795001 chr2R_14795001 D17-c3 1153 chr2R 14826373 14826384 chr2R 14826502 14826513 5 129 8.5 4.0 6.2 0.7 140 chr2R 14826373 intergenic not near genes chr2R 14826443 intergenic not near genes chr2R 14826513 intergenic not near genes chr2R_5_14825001 chr2R_14825001 D17-c3 1154 chr2R 14881231 14881269 chr2R 14881399 14881437 16 168 5.0 9.0 7.0 2.0 206 chr2R 14881231 exon Cyp6a9 - chr2R 14881334 5` UTR Cyp6a9 - chr2R 14881437 intergenic Cyp6a9 - chr2R_16_14880001 chr2R_14880001 D17-c3 1155 chr2R 14889193 14889212 chr2R 14897826 14897845 Max-element 10 8633 12.5 0.0 6.2 1.4 8652 chr2R 14889193 intergenic Cyp6a8 - chr2R 14893519 intergenic not near genes chr2R 14897845 intergenic not near genes chr2R_10_14890001 chr2R_14890001 D17-c3 1156 chr2R 14911682 14911724 chr2R 14911830 14911872 17 148 6.5 4.5 5.5 2.6 190 chr2R 14911682 intron CG10249 - chr2R 14911777 intron CG10249 - chr2R 14911872 intron CG10249 - chr2R_17_14910001 chr2R_14910001 D17-c3 1157 chr2R 14917825 14917879 chr2R 14917935 14917989 26 110 7.0 6.5 6.8 3.3 164 chr2R 14917825 intron CG10249 - chr2R 14917907 intron CG10249 - chr2R 14917989 intron CG10249 - chr2R_26_14915001 chr2R_14915001 D17-c3 1158 chr2R 14919129 14919178 chr2R 14919263 14919312 9 134 4.0 0.0 2.0 3.0 183 chr2R 14919129 intron CG10249 - chr2R 14919220 intron CG10249 - chr2R 14919312 intron CG10249 - chr2R_9_14915001 chr2R_14915001 D17-c3 1159 chr2R 14922118 14922163 chr2R 14922219 14922264 16 101 7.0 6.5 6.8 2.1 146 chr2R 14922118 intron CG10249 - chr2R 14922191 intron CG10249 - chr2R 14922264 intron CG10249 - chr2R_16_14920001 chr2R_14920001 D17-c3 1160 chr2R 14954721 14954780 chr2R 14954822 14954881 15 101 9.0 5.0 7.0 1.9 160 chr2R 14954721 intron aPKC - chr2R 14954801 intron aPKC - chr2R 14954881 intron aPKC - chr2R_15_14950001 chr2R_14950001 D17-c3 1161 chr2R 15004703 15004753 chr2R 15005057 15005106 jockey 22 354 5.5 5.0 5.2 3.5 403 chr2R 15004703 intergenic not near genes chr2R 15004904 intergenic not near genes chr2R 15005106 intergenic not near genes chr2R_22_15000001 chr2R_15000001 D17-c3 1162 chr2R 15015434 15015487 chr2R 15022883 15022936 mdg1 19 7449 5.0 8.0 6.5 2.5 7502 chr2R 15015434 intron hbs + chr2R 15019185 intron hbs + chr2R 15022936 intron hbs + chr2R_19_15015001 chr2R_15015001 D17-c3 1163 chr2R 15051058 15051109 chr2R 15051165 15051216 28 107 11.5 12.5 12.0 2.2 158 chr2R 15051058 intergenic not near genes chr2R 15051137 intergenic not near genes chr2R 15051216 intergenic not near genes chr2R_28_15050001 chr2R_15050001 D17-c3 1164 chr2R 15110651 15110684 chr2R 15110752 15110780 10 104 6.0 8.5 7.2 1.2 129 chr2R 15110651 intergenic not near genes chr2R 15110716 intergenic not near genes chr2R 15110780 intergenic not near genes chr2R_10_15110001 chr2R_15110001 D17-c3 1165 chr2R 15119301 15119350 chr2R 15127797 15127855 Tirant 19 8504 5.5 3.0 4.2 3.7 8554 chr2R 15119301 intron chn + chr2R 15123578 intron chn + chr2R 15127855 intron chn + chr2R_19_15120001 chr2R_15120001 D17-c3 1166 chr2R 15230371 15230375 chr2R 15230673 15230677 4 302 21.0 0.0 10.5 0.3 306 chr2R 15230371 intron,5` UTR Fs -,CR44370 + chr2R 15230524 intron,5` UTR Fs -,CR44370 + chr2R 15230677 intron,5` UTR Fs -,CR44370 + chr2R_4_15230001 chr2R_15230001 D17-c3 1167 chr2R 15296134 15296173 chr2R 15296242 15296281 24 105 5.5 3.5 4.5 4.4 147 chr2R 15296134 intron Trpm - chr2R 15296208 intron Trpm - chr2R 15296281 intron Trpm - chr2R_24_15295001 chr2R_15295001 D17-c3 1168 chr2R 15330183 15330233 chr2R 15330342 15330392 14 156 0.5 4.5 2.5 4.0 209 chr2R 15330183 intergenic CR44371 - chr2R 15330288 intergenic CR44371 - chr2R 15330392 intergenic CR44371 - chr2R_14_15330001 chr2R_15330001 D17-c3 1169 chr2R 15354999 15355056 chr2R 15355110 15355167 39 110 7.0 10.5 8.8 4.0 168 chr2R 15354999 intron unc-5 + chr2R 15355083 intron unc-5 + chr2R 15355167 intron unc-5 + chr2R_39_15355001 chr2R_15355001 D17-c3 1170 chr2R 15362623 15362673 chr2R 15362730 15362778 20 107 7.0 5.5 6.2 2.8 155 chr2R 15362623 intron unc-5 + chr2R 15362700 intron unc-5 + chr2R 15362778 intron unc-5 + chr2R_20_15360001 chr2R_15360001 D17-c3 1171 chr2R 15374790 15375062 chr2R 15374898 15375197 12 128 8.5 4.5 6.5 1.6 407 chr2R 15374790 intergenic not near genes chr2R 15374994 intergenic not near genes chr2R 15375197 intergenic not near genes chr2R_12_15370001 chr2R_15370001 D17-c3 1172 chr2R 15375342 15375362 chr2R 15376184 15376199 8 841 0.0 7.5 3.8 1.7 857 chr2R 15375342 intergenic not near genes chr2R 15375770 intergenic not near genes chr2R 15376199 intergenic dup - chr2R_8_15375001 chr2R_15375001 D17-c3 1173 chr2R 15404093 15404106 chr2R 15404216 15404229 5 121 14.5 8.5 11.5 0.4 136 chr2R 15404093 intron CG43729 + chr2R 15404161 intron CG43729 + chr2R 15404229 intron CG43729 + chr2R_5_15400001 chr2R_15400001 D17-c3 1174 chr2R 15404107 15404130 chr2R 15404215 15404241 11 116 10.0 8.5 9.2 1.1 134 chr2R 15404107 intron CG43729 + chr2R 15404174 intron CG43729 + chr2R 15404241 intron CG43729 + chr2R_11_15400001 chr2R_15400001 D17-c3 1175 chr2R 15498136 15498185 chr2R 15498243 15498294 6 107 2.5 0.0 1.2 2.7 158 chr2R 15498136 intergenic not near genes chr2R 15498215 intergenic not near genes chr2R 15498294 intergenic not near genes chr2R_6_15495001 chr2R_15495001 D17-c3 1176 chr2R 15606114 15606130 chr2R 15606216 15606232 8 102 10.5 1.5 6.0 1.1 118 chr2R 15606114 intergenic not near genes chr2R 15606173 intergenic not near genes chr2R 15606232 intergenic not near genes chr2R_8_15605001 chr2R_15605001 D17-c3 1177 chr2R 15794864 15794878 chr2R 15794979 15794993 7 114 1.5 0.0 0.8 3.9 129 chr2R 15794864 intron,5` UTR Zasp52 -,tun + chr2R 15794928 intron,5` UTR Zasp52 -,tun + chr2R 15794993 intron,intron Zasp52 -,tun + chr2R_7_15790001 chr2R_15790001 D17-c3 1178 chr2R 15828126 15828153 chr2R 15828311 15828338 5 185 0.0 6.0 3.0 1.2 212 chr2R 15828126 intron,intron tun +,Poxn - chr2R 15828232 intron,intron tun +,Poxn - chr2R 15828338 intron,intron tun +,Poxn - chr2R_5_15825001 chr2R_15825001 D17-c3 1179 chr2R 15833500 15833507 chr2R 15833612 15833616 5 111 11.5 7.5 9.5 0.5 116 chr2R 15833500 intron,intron tun +,Poxn - chr2R 15833558 intron,intron tun +,Poxn - chr2R 15833616 intron,intron tun +,Poxn - chr2R_5_15830001 chr2R_15830001 D17-c3 1180 chr2R 15833508 15833554 chr2R 15833610 15833631 30 107 4.0 7.0 5.5 4.6 123 chr2R 15833508 intron,intron tun +,Poxn - chr2R 15833570 intron,intron tun +,Poxn - chr2R 15833631 intron,intron tun +,Poxn - chr2R_30_15830001 chr2R_15830001 D17-c3 1181 chr2R 15891802 15891836 chr2R 15891903 15891937 8 101 2.0 7.5 4.8 1.4 135 chr2R 15891802 intron sli - chr2R 15891870 intron sli - chr2R 15891937 intron sli - chr2R_8_15890001 chr2R_15890001 D17-c3 1182 chr2R 15930355 15930367 chr2R 15930457 15930464 5 101 32.5 2.5 17.5 0.3 109 chr2R 15930355 intron bdg - chr2R 15930410 intron bdg - chr2R 15930464 intron bdg - chr2R_5_15930001 chr2R_15930001 D17-c3 1183 chr2R 16037206 16037228 chr2R 16037305 16037320 18 99 18.0 21.5 19.8 0.9 114 chr2R 16037206 intron SP2353 + chr2R 16037263 intron SP2353 + chr2R 16037320 intron SP2353 + chr2R_18_16035001 chr2R_16035001 D17-c3 1184 chr2R 16054930 16054962 chr2R 16055033 16055070 28 108 15.0 14.0 14.5 1.8 140 chr2R 16054930 intron CG8405 + chr2R 16055000 intron CG8405 + chr2R 16055070 intron CG8405 + chr2R_28_16050001 chr2R_16050001 D17-c3 1185 chr2R 16061700 16061717 chr2R 16064359 16064377 Burdock 6 2658 9.0 3.5 6.2 0.8 2677 chr2R 16061700 intergenic not near genes chr2R 16063038 intergenic not near genes chr2R 16064377 intergenic not near genes chr2R_6_16060001 chr2R_16060001 D17-c3 1186 chr2R 16119867 16119921 chr2R 16120016 16120070 32 147 9.5 12.0 10.8 2.7 203 chr2R 16119867 5` UTR Jhe + chr2R 16119968 intron Jhe + chr2R 16120070 intron Jhe + chr2R_32_16115001 chr2R_16115001 D17-c3 1187 chr2R 16220682 16220735 chr2R 16220787 16220840 26 105 9.5 6.0 7.8 3.0 158 chr2R 16220682 intron mrj - chr2R 16220761 intron mrj - chr2R 16220840 intron mrj - chr2R_26_16220001 chr2R_16220001 D17-c3 1188 chr2R 16245388 16245430 chr2R 16245507 16245549 20 118 7.5 5.0 6.2 2.8 161 chr2R 16245388 intron CngA - chr2R 16245468 intron CngA - chr2R 16245549 intron CngA - chr2R_20_16245001 chr2R_16245001 D17-c3 1189 chr2R 16279363 16279517 chr2R 16279468 16279681 11 149 0.0 0.0 0.0 11.0 318 chr2R 16279363 intergenic not near genes chr2R 16279522 intergenic CG15704 + chr2R 16279681 intergenic CG15704 + chr2R_11_16275001 chr2R_16275001 D17-c3 1190 chr2R 16352841 16352868 chr2R 16352949 16352976 11 107 6.0 7.0 6.5 1.5 135 chr2R 16352841 intergenic not near genes chr2R 16352908 intergenic not near genes chr2R 16352976 intergenic not near genes chr2R_11_16350001 chr2R_16350001 D17-c3 1191 chr2R 16449292 16449337 chr2R 16449564 16449609 26 272 2.5 5.5 4.0 5.2 317 chr2R 16449292 intergenic not near genes chr2R 16449450 intergenic not near genes chr2R 16449609 intergenic not near genes chr2R_26_16445001 chr2R_16445001 D17-c3 1192 chr2R 16460738 16460767 chr2R 16460845 16460874 11 107 4.0 5.5 4.8 1.9 136 chr2R 16460738 intergenic not near genes chr2R 16460806 intergenic not near genes chr2R 16460874 intergenic not near genes chr2R_11_16460001 chr2R_16460001 D17-c3 1193 chr2R 16482862 16482904 chr2R 16483132 16483174 22 268 8.0 7.0 7.5 2.6 312 chr2R 16482862 intergenic not near genes chr2R 16483018 intergenic not near genes chr2R 16483174 intergenic not near genes chr2R_22_16480001 chr2R_16480001 D17-c3 1194 chr2R 16518019 16518072 chr2R 16518120 16518173 21 101 5.0 6.5 5.8 3.1 154 chr2R 16518019 intron Sema-2a + chr2R 16518096 intron Sema-2a + chr2R 16518173 intron Sema-2a + chr2R_21_16515001 chr2R_16515001 D17-c3 1195 chr2R 16539624 16539667 chr2R 16544858 16544901 copia 13 5234 7.0 7.5 7.2 1.6 5277 chr2R 16539624 intergenic not near genes chr2R 16542262 intergenic not near genes chr2R 16544901 intergenic not near genes chr2R_13_16540001 chr2R_16540001 D17-c3 1196 chr2R 16599267 16599323 chr2R 16599372 16599417 44 102 9.0 11.0 10.0 4.0 150 chr2R 16599267 intron,exon CG8303 -,CG5089 + chr2R 16599342 intron,exon CG8303 -,CG5089 + chr2R 16599417 intron,exon CG8303 -,CG5089 + chr2R_44_16595001 chr2R_16595001 D17-c3 1197 chr2R 16689133 16689165 chr2R 16689486 16689519 4 354 31.5 24.0 27.8 0.1 386 chr2R 16689133 intron CG30463 - chr2R 16689326 intron CG30463 - chr2R 16689519 intron CG30463 - chr2R_4_16685001 chr2R_16685001 D17-c3 1198 chr2R 16882706 16882747 chr2R 16882855 16882896 12 148 3.5 4.5 4.0 2.4 190 chr2R 16882706 intron,intron CG8910 -,CG6472 + chr2R 16882801 intron,intron CG8910 -,CG6472 + chr2R 16882896 intron,intron CG8910 -,CG6472 + chr2R_12_16880001 chr2R_16880001 D17-c3 1199 chr2R 17079027 17079082 chr2R 17079134 17079188 12 107 2.5 4.0 3.2 2.9 161 chr2R 17079027 intron CG30460 - chr2R 17079108 intron CG30460 - chr2R 17079188 intron CG30460 - chr2R_12_17075001 chr2R_17075001 D17-c3 1200 chr2R 17132830 17132866 chr2R 17132955 17132991 12 125 7.0 6.0 6.5 1.6 161 chr2R 17132830 intergenic not near genes chr2R 17132910 intergenic not near genes chr2R 17132991 intergenic Acp54A1 + chr2R_12_17130001 chr2R_17130001 D17-c3 1201 chr2R 17147223 17147264 chr2R 17152279 17152320 jockey 13 5056 5.0 8.0 6.5 1.7 5097 chr2R 17147223 intergenic not near genes chr2R 17149772 intergenic not near genes chr2R 17152320 intergenic not near genes chr2R_13_17145001 chr2R_17145001 D17-c3 1202 chr2R 17161148 17161189 chr2R 17161258 17161299 16 110 6.5 6.0 6.2 2.2 151 chr2R 17161148 intergenic CG30457 - chr2R 17161224 intergenic CG30457 - chr2R 17161299 intergenic CG30457 - chr2R_16_17160001 chr2R_17160001 D17-c3 1203 chr2R 17236496 17236529 chr2R 17241725 17241758 copia 13 5229 3.5 9.0 6.2 1.8 5262 chr2R 17236496 intron mbl + chr2R 17239127 intron mbl + chr2R 17241758 intron mbl + chr2R_13_17235001 chr2R_17235001 D17-c3 1204 chr2R 17389048 17389069 chr2R 17389162 17389183 11 113 0.0 6.5 3.2 2.6 135 chr2R 17389048 3` UTR CR44344 - chr2R 17389116 intergenic CR44344 - chr2R 17389183 intergenic CR44344 - chr2R_11_17385001 chr2R_17385001 D17-c3 1205 chr2R 17485891 17485950 chr2R 17490686 17490743 F-element 17 4794 6.5 5.5 6.0 2.4 4852 chr2R 17485891 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17488317 intron NT5E-2 + chr2R 17490743 intron NT5E-2 + chr2R_17_17485001 chr2R_17485001 D17-c3 1206 chr2R 17610840 17610889 chr2R 17611086 17611135 13 246 3.5 3.0 3.2 3.1 295 chr2R 17610840 intron CG10936 - chr2R 17610988 intron CG10936 - chr2R 17611135 intron CG10936 - chr2R_13_17610001 chr2R_17610001 D17-c3 1207 chr2R 17918170 17918182 chr2R 17918242 17918252 7 77 7.0 0.5 3.8 1.5 82 chr2R 17918170 intron Elk + chr2R 17918211 intron Elk + chr2R 17918252 intron Elk + chr2R_7_17915001 chr2R_17915001 D17-c3 1208 chr2R 17921432 17921469 chr2R 17921539 17921576 6 107 2.0 7.0 4.5 1.1 144 chr2R 17921432 intron Elk + chr2R 17921504 intron Elk + chr2R 17921576 intron Elk + chr2R_6_17920001 chr2R_17920001 D17-c3 1209 chr2R 17966124 17966176 chr2R 17966230 17966282 36 103 10.5 8.5 9.5 3.4 158 chr2R 17966124 intergenic not near genes chr2R 17966203 intergenic not near genes chr2R 17966282 intergenic not near genes chr2R_36_17965001 chr2R_17965001 D17-c3 1210 chr2R 17971098 17971127 chr2R 17971202 17971231 19 103 7.5 14.0 10.8 1.6 133 chr2R 17971098 intergenic not near genes chr2R 17971164 intergenic not near genes chr2R 17971231 intergenic not near genes chr2R_19_17970001 chr2R_17970001 D17-c3 1211 chr2R 17974507 17974564 chr2R 17974660 17974717 34 152 7.5 10.5 9.0 3.4 210 chr2R 17974507 intergenic not near genes chr2R 17974612 intergenic not near genes chr2R 17974717 intergenic dpr13 - chr2R_34_17970001 chr2R_17970001 D17-c3 1212 chr2R 17982900 17982949 chr2R 17983009 17983059 17 109 3.5 4.5 4.0 3.4 159 chr2R 17982900 intron dpr13 - chr2R 17982980 intron dpr13 - chr2R 17983059 intron dpr13 - chr2R_17_17980001 chr2R_17980001 D17-c3 1213 chr2R 17993911 17993937 chr2R 17994035 17994061 6 123 11.0 3.5 7.2 0.7 150 chr2R 17993911 intron dpr13 - chr2R 17993986 intron dpr13 - chr2R 17994061 intron dpr13 - chr2R_6_17990001 chr2R_17990001 D17-c3 1214 chr2R 17995321 17995374 chr2R 17995424 17995477 32 103 7.0 12.5 9.8 3.0 156 chr2R 17995321 intron dpr13 - chr2R 17995399 intron dpr13 - chr2R 17995477 intron dpr13 - chr2R_32_17995001 chr2R_17995001 D17-c3 1215 chr2R 18021548 18021560 chr2R 18021980 18022037 7 468 12.5 11.0 11.8 0.5 489 chr2R 18021548 exon CG10910 + chr2R 18021792 exon CG10910 + chr2R 18022037 exon CG10910 + chr2R_7_18020001 chr2R_18020001 D17-c3 1216 chr2R 18042801 18042997 chr2R 18042943 18043115 8 121 1.5 1.5 1.5 3.2 314 chr2R 18042801 3` UTR CG5773 - chr2R 18042958 3` UTR CG5773 - chr2R 18043115 exon CG5773 - chr2R_8_18040001 chr2R_18040001 D17-c3 1217 chr2R 18045652 18045699 chr2R 18046029 18046076 jockey 10 377 3.0 3.0 3.0 2.5 424 chr2R 18045652 intergenic not near genes chr2R 18045864 intergenic not near genes chr2R 18046076 intergenic CG5767 - chr2R_10_18045001 chr2R_18045001 D17-c3 1218 chr2R 18111674 18111705 chr2R 18115567 18115598 F-element 12 3893 6.0 4.0 5.0 2.0 3924 chr2R 18111674 intergenic not near genes chr2R 18113636 intergenic not near genes chr2R 18115598 intergenic not near genes chr2R_12_18110001 chr2R_18110001 D17-c3 1219 chr2R 18124317 18124370 chr2R 18124419 18124472 19 102 6.5 7.0 6.8 2.4 155 chr2R 18124317 intron stau - chr2R 18124394 intron stau - chr2R 18124472 intron stau - chr2R_19_18120001 chr2R_18120001 D17-c3 1220 chr2R 18195182 18195217 chr2R 18195295 18195320 7 107 6.0 10.0 8.0 0.8 138 chr2R 18195182 intergenic not near genes chr2R 18195251 intergenic not near genes chr2R 18195320 intergenic not near genes chr2R_7_18195001 chr2R_18195001 D17-c3 1221 chr2R 18207294 18207350 chr2R 18207406 18207460 24 110 8.5 7.5 8.0 2.7 166 chr2R 18207294 intergenic CG30114 + chr2R 18207377 intergenic CG30114 + chr2R 18207460 intergenic CG30114 + chr2R_24_18205001 chr2R_18205001 D17-c3 1222 chr2R 18260855 18260869 chr2R 18261025 18261039 9 170 9.5 1.0 5.2 1.5 184 chr2R 18260855 intergenic not near genes chr2R 18260947 intergenic not near genes chr2R 18261039 intergenic not near genes chr2R_9_18260001 chr2R_18260001 D17-c3 1223 chr2R 18289404 18289456 chr2R 18289528 18289583 18 126 10.0 11.0 10.5 1.6 179 chr2R 18289404 intron,intron sbb -,CG14502 + chr2R 18289494 intron,intron sbb -,CG14502 + chr2R 18289583 exon,intron sbb -,CG14502 + chr2R_18_18285001 chr2R_18285001 D17-c3 1224 chr2R 18358371 18358418 chr2R 18372606 18372655 roo 11 14237 4.5 3.5 4.0 2.2 14284 chr2R 18358371 intergenic not near genes chr2R 18365513 intergenic not near genes chr2R 18372655 intergenic not near genes chr2R_11_18365001 chr2R_18365001 D17-c3 1225 chr2R 18398135 18398192 chr2R 18398255 18398257 11 114 4.0 2.0 3.0 2.8 122 chr2R 18398135 intron GstE10 - chr2R 18398196 intron GstE10 - chr2R 18398257 intron GstE10 - chr2R_11_18395001 chr2R_18395001 D17-c3 1226 chr2R 18405726 18405782 chr2R 18405832 18405887 7 105 3.0 0.0 1.5 2.8 161 chr2R 18405726 intergenic GstE6 +,GstE5 + chr2R 18405806 intergenic GstE6 +,GstE5 + chr2R 18405887 intergenic GstE6 + chr2R_7_18405001 chr2R_18405001 D17-c3 1227 chr2R 18477743 18477762 chr2R 18477822 18477870 22 99 4.5 14.5 9.5 2.1 127 chr2R 18477743 intron CG30116 - chr2R 18477806 intron CG30116 - chr2R 18477870 intron CG30116 - chr2R_22_18475001 chr2R_18475001 D17-c3 1228 chr2R 18487813 18487852 chr2R 18495289 18495347 blood 11 7481 1.0 8.0 4.5 2.0 7534 chr2R 18487813 intron CG30116 - chr2R 18491580 intron CG30116 - chr2R 18495347 intron CG30116 - chr2R_11_18490001 chr2R_18490001 D17-c3 1229 chr2R 18527761 18527809 chr2R 18527907 18527950 24 144 11.0 6.0 8.5 2.5 189 chr2R 18527761 5` UTR CG10924 + chr2R 18527856 intron CG10924 + chr2R 18527950 intron CG10924 + chr2R_24_18525001 chr2R_18525001 D17-c3 1230 chr2R 18528169 18528173 chr2R 18528279 18528283 4 110 18.0 7.5 12.8 0.3 114 chr2R 18528169 intron CG10924 + chr2R 18528226 intron CG10924 + chr2R 18528283 intron CG10924 + chr2R_4_18525001 chr2R_18525001 D17-c3 1231 chr2R 18528181 18528217 chr2R 18528278 18528312 22 98 8.0 7.5 7.8 2.5 131 chr2R 18528181 intron CG10924 + chr2R 18528246 intron CG10924 + chr2R 18528312 intron CG10924 + chr2R_22_18525001 chr2R_18525001 D17-c3 1232 chr2R 18575780 18575808 chr2R 18581993 18582021 3S18 6 6213 15.5 7.5 11.5 0.5 6241 chr2R 18575780 intron GEFmeso - chr2R 18578900 intron GEFmeso - chr2R 18582021 intron GEFmeso - chr2R_6_18575001 chr2R_18575001 D17-c3 1233 chr2R 18575809 18575827 chr2R 18581984 18582040 3S18 20 6198 12.5 6.5 9.5 1.9 6231 chr2R 18575809 intron GEFmeso - chr2R 18578924 intron GEFmeso - chr2R 18582040 intron GEFmeso - chr2R_20_18575001 chr2R_18575001 D17-c3 1234 chr2R 18590845 18590898 chr2R 18600022 18600075 roo 32 9177 5.5 5.0 5.2 5.2 9230 chr2R 18590845 intron GEFmeso - chr2R 18595460 intron GEFmeso - chr2R 18600075 intron GEFmeso - chr2R_32_18595001 chr2R_18595001 D17-c3 1235 chr2R 18646389 18646432 chr2R 18646559 18646602 20 169 5.0 6.0 5.5 3.1 213 chr2R 18646389 intron SP2637 - chr2R 18646496 intron SP2637 - chr2R 18646602 intron SP2637 - chr2R_20_18645001 chr2R_18645001 D17-c3 1236 chr2R 18713216 18713271 chr2R 18713318 18713373 15 102 5.0 3.5 4.2 2.9 157 chr2R 18713216 intergenic not near genes chr2R 18713294 intergenic not near genes chr2R 18713373 intergenic not near genes chr2R_15_18710001 chr2R_18710001 D17-c3 1237 chr2R 18736763 18736780 chr2R 18736913 18736930 6 150 8.0 6.5 7.2 0.7 167 chr2R 18736763 intron Hs3st-A + chr2R 18736846 intron Hs3st-A + chr2R 18736930 intron Hs3st-A + chr2R_6_18735001 chr2R_18735001 D17-c3 1238 chr2R 18738181 18738235 chr2R 18738282 18738335 13 101 0.5 2.0 1.2 5.9 154 chr2R 18738181 intron Hs3st-A + chr2R 18738258 intron Hs3st-A + chr2R 18738335 intron Hs3st-A + chr2R_13_18735001 chr2R_18735001 D17-c3 1239 chr2R 18769628 18769738 chr2R 18769913 18769970 10 253 0.0 5.0 2.5 2.9 342 chr2R 18769628 intron Mctp + chr2R 18769799 intron Mctp + chr2R 18769970 intron Mctp + chr2R_10_18765001 chr2R_18765001 D17-c3 1240 chr2R 18778587 18778607 chr2R 18778710 18778730 15 122 5.5 1.0 3.2 3.6 143 chr2R 18778587 intergenic not near genes chr2R 18778658 intergenic not near genes chr2R 18778730 intergenic not near genes chr2R_15_18775001 chr2R_18775001 D17-c3 1241 chr2R 18862288 18862328 chr2R 18862397 18862471 4 119 2.0 1.5 1.8 1.4 183 chr2R 18862288 intergenic Jheh3 - chr2R 18862380 intergenic Jheh3 -,CG43069 + chr2R 18862471 intergenic CG43069 +,Jheh3 - chr2R_4_18860001 chr2R_18860001 D17-c3 1242 chr2R 18904435 18904461 chr2R 18904603 18904644 15 172 10.0 18.0 14.0 1.0 209 chr2R 18904435 intron sano + chr2R 18904540 intron sano + chr2R 18904644 intron sano + chr2R_15_18900001 chr2R_18900001 D17-c3 1243 chr2R 18964899 18964953 chr2R 18965000 18965054 21 101 8.0 7.0 7.5 2.5 155 chr2R 18964899 intergenic not near genes chr2R 18964976 intergenic not near genes chr2R 18965054 intergenic not near genes chr2R_21_18960001 chr2R_18960001 D17-c3 1244 chr2R 18988992 18989039 chr2R 18989095 18989142 19 103 1.5 2.0 1.8 6.8 150 chr2R 18988992 intron tn + chr2R 18989067 intron tn + chr2R 18989142 intron tn + chr2R_19_18985001 chr2R_18985001 D17-c3 1245 chr2R 19026029 19026060 chr2R 19026155 19026186 8 126 8.5 0.5 4.5 1.5 157 chr2R 19026029 intron 5-HT1B - chr2R 19026108 intron 5-HT1B - chr2R 19026186 intron 5-HT1B - chr2R_8_19025001 chr2R_19025001 D17-c3 1246 chr2R 19067709 19067745 chr2R 19067810 19067846 9 101 3.5 2.0 2.8 2.4 137 chr2R 19067709 intron 5-HT1A + chr2R 19067778 intron 5-HT1A + chr2R 19067846 intron 5-HT1A + chr2R_9_19065001 chr2R_19065001 D17-c3 1247 chr2R 19124380 19124422 chr2R 19124487 19124529 33 107 6.5 6.5 6.5 4.4 149 chr2R 19124380 exon CG15117 - chr2R 19124454 intron CG15117 - chr2R 19124529 intron CG15117 - chr2R_33_19120001 chr2R_19120001 D17-c3 1248 chr2R 19124426 19124430 chr2R 19124486 19124537 7 100 6.0 6.0 6.0 1.0 111 chr2R 19124426 intron CG15117 - chr2R 19124482 intron CG15117 - chr2R 19124537 exon CG15117 - chr2R_7_19120001 chr2R_19120001 D17-c3 1249 chr2R 19183320 19183375 chr2R 19183421 19183476 22 101 5.0 9.5 7.2 2.7 156 chr2R 19183320 intron hppy + chr2R 19183398 intron hppy + chr2R 19183476 intron hppy + chr2R_22_19180001 chr2R_19180001 D17-c3 1250 chr2R 19295929 19295962 chr2R 19296207 19296250 5 286 4.5 5.5 5.0 0.8 321 chr2R 19295929 intron Tab2 + chr2R 19296090 intron Tab2 + chr2R 19296250 intron Tab2 + chr2R_5_19295001 chr2R_19295001 D17-c3 1251 chr2R 19300939 19300989 chr2R 19301047 19301097 17 108 4.5 6.0 5.2 2.7 158 chr2R 19300939 intron Tab2 + chr2R 19301018 intron Tab2 + chr2R 19301097 intron Tab2 + chr2R_17_19300001 chr2R_19300001 D17-c3 1252 chr2R 19376111 19376143 chr2R 19376329 19376361 6 218 5.0 7.0 6.0 0.9 250 chr2R 19376111 intron CG10062 + chr2R 19376236 intron CG10062 + chr2R 19376361 intron CG10062 + chr2R_6_19375001 chr2R_19375001 D17-c3 1253 chr2R 19385256 19385309 chr2R 19385564 19385624 11 314 4.0 3.0 3.5 2.4 368 chr2R 19385256 intergenic CG10073 + chr2R 19385440 intergenic CG10073 +,CG10081 + chr2R 19385624 intergenic CG10081 + chr2R_11_19385001 chr2R_19385001 D17-c3 1254 chr2R 19385302 19385312 chr2R 19385586 19385596 4 284 3.5 3.0 3.2 1.0 294 chr2R 19385302 intergenic CG10073 + chr2R 19385449 intergenic CG10081 +,CG10073 + chr2R 19385596 intergenic CG10081 + chr2R_4_19385001 chr2R_19385001 D17-c3 1255 chr2R 19388474 19388529 chr2R 19388592 19388647 32 117 12.0 12.0 12.0 2.5 173 chr2R 19388474 intron CG10081 + chr2R 19388560 exon CG10081 + chr2R 19388647 exon CG10081 + chr2R_32_19385001 chr2R_19385001 D17-c3 1256 chr2R 19411790 19411838 chr2R 19411973 19412020 17 182 6.0 4.5 5.2 2.7 230 chr2R 19411790 intron hts - chr2R 19411905 intron hts - chr2R 19412020 intron hts - chr2R_17_19410001 chr2R_19410001 D17-c3 1257 chr2R 19498705 19498760 chr2R 19498811 19498866 32 105 4.5 8.5 6.5 4.3 161 chr2R 19498705 intron CG15120 + chr2R 19498786 intron CG15120 + chr2R 19498866 intron CG15120 + chr2R_32_19495001 chr2R_19495001 D17-c3 1258 chr2R 19535075 19535129 chr2R 19535317 19535371 21 241 7.0 4.0 5.5 3.2 296 chr2R 19535075 intron sm - chr2R 19535223 intron sm - chr2R 19535371 intron sm - chr2R_21_19535001 chr2R_19535001 D17-c3 1259 chr2R 19539120 19539176 chr2R 19539236 19539272 41 115 7.0 9.5 8.2 4.5 152 chr2R 19539120 intron sm - chr2R 19539196 intron sm - chr2R 19539272 intron sm - chr2R_41_19535001 chr2R_19535001 D17-c3 1260 chr2R 19544797 19544802 chr2R 19544902 19544907 5 105 13.5 7.5 10.5 0.4 110 chr2R 19544797 intron sm - chr2R 19544852 intron sm - chr2R 19544907 intron sm - chr2R_5_19540001 chr2R_19540001 D17-c3 1261 chr2R 19544803 19544857 chr2R 19544901 19544962 28 99 5.5 7.5 6.5 3.7 159 chr2R 19544803 intron sm - chr2R 19544882 intron sm - chr2R 19544962 intron sm - chr2R_28_19540001 chr2R_19540001 D17-c3 1262 chr2R 19715833 19715857 chr2R 19723327 19723351 blood 18 7493 13.0 12.5 12.8 1.3 7518 chr2R 19715833 intergenic not near genes chr2R 19719592 intergenic not near genes chr2R 19723351 intergenic not near genes chr2R_18_19715001 chr2R_19715001 D17-c3 1263 chr2R 19773993 19774038 chr2R 19774131 19774176 9 138 3.0 2.5 2.8 2.4 183 chr2R 19773993 intergenic not near genes chr2R 19774084 intergenic not near genes chr2R 19774176 intergenic not near genes chr2R_9_19770001 chr2R_19770001 D17-c3 1264 chr2R 19776571 19776623 chr2R 19779919 19779969 jockey 24 3348 7.0 5.0 6.0 3.4 3398 chr2R 19776571 intergenic not near genes chr2R 19778270 intergenic not near genes chr2R 19779969 intergenic not near genes chr2R_24_19775001 chr2R_19775001 D17-c3 1265 chr2R 19794842 19794899 chr2R 19794970 19795029 18 127 8.0 7.0 7.5 2.1 187 chr2R 19794842 intergenic not near genes chr2R 19794936 intergenic not near genes chr2R 19795029 intergenic not near genes chr2R_18_19790001 chr2R_19790001 D17-c3 1266 chr2R 19807645 19807700 chr2R 19807752 19807807 34 107 5.5 6.0 5.8 5.0 162 chr2R 19807645 intergenic not near genes chr2R 19807726 intergenic not near genes chr2R 19807807 intergenic not near genes chr2R_34_19805001 chr2R_19805001 D17-c3 1267 chr2R 19914823 19914871 chr2R 19922260 19922308 mdg1 15 7436 10.0 8.5 9.2 1.5 7485 chr2R 19914823 intergenic not near genes chr2R 19918566 intergenic not near genes chr2R 19922308 intergenic not near genes chr2R_15_19915001 chr2R_19915001 D17-c3 1268 chr2R 19922592 19922614 chr2R 19922694 19922716 7 99 9.0 11.0 10.0 0.6 124 chr2R 19922592 intergenic not near genes chr2R 19922654 intergenic not near genes chr2R 19922716 intergenic not near genes chr2R_7_19920001 chr2R_19920001 D17-c3 1269 chr2R 19940545 19940602 chr2R 19940980 19941030 24 434 5.5 9.0 7.2 2.9 485 chr2R 19940545 intergenic CR43421 - chr2R 19940788 intergenic CR43421 - chr2R 19941030 intergenic CR43421 - chr2R_24_19940001 chr2R_19940001 D17-c3 1270 chr2R 19957406 19957463 chr2R 19962632 19962690 copia 26 5226 7.0 10.0 8.5 2.7 5284 chr2R 19957406 intergenic CG44623 + chr2R 19960048 intergenic not near genes chr2R 19962690 intergenic not near genes chr2R_26_19960001 chr2R_19960001 D17-c3 1271 chr2R 20057183 20057204 chr2R 20057306 20057327 6 123 10.0 2.5 6.2 0.8 144 chr2R 20057183 intergenic not near genes chr2R 20057255 intergenic not near genes chr2R 20057327 intergenic not near genes chr2R_6_20055001 chr2R_20055001 D17-c3 1272 chr2R 20069223 20069273 chr2R 20071878 20071928 opus 23 2655 4.5 5.0 4.8 4.0 2705 chr2R 20069223 intergenic not near genes chr2R 20070576 intergenic not near genes chr2R 20071928 intergenic not near genes chr2R_23_20070001 chr2R_20070001 D17-c3 1273 chr2R 20088022 20088024 chr2R 20088155 20088157 1360 4 133 3.0 5.5 4.2 0.8 135 chr2R 20088022 intergenic not near genes chr2R 20088090 intergenic not near genes chr2R 20088157 intergenic not near genes chr2R_4_20085001 chr2R_20085001 D17-c3 1274 chr2R 20125726 20125744 chr2R 20125827 20125845 11 100 5.0 11.0 8.0 1.2 119 chr2R 20125726 intergenic not near genes chr2R 20125786 intergenic not near genes chr2R 20125845 intergenic not near genes chr2R_11_20125001 chr2R_20125001 D17-c3 1275 chr2R 20174621 20174676 chr2R 20174722 20174777 33 100 3.0 9.0 6.0 4.7 156 chr2R 20174621 intergenic not near genes chr2R 20174699 intergenic not near genes chr2R 20174777 intergenic not near genes chr2R_33_20170001 chr2R_20170001 D17-c3 1276 chr2R 20395148 20395182 chr2R 20395251 20395285 13 103 6.0 5.5 5.8 1.9 137 chr2R 20395148 intergenic not near genes chr2R 20395216 intergenic not near genes chr2R 20395285 intergenic not near genes chr2R_13_20395001 chr2R_20395001 D17-c3 1277 chr2R 20432454 20432502 chr2R 20432575 20432621 9 119 10.5 7.0 8.8 0.9 167 chr2R 20432454 intron CG12484 + chr2R 20432538 intron CG12484 + chr2R 20432621 intron CG12484 + chr2R_9_20430001 chr2R_20430001 D17-c3 1278 chr2R 20555315 20555361 chr2R 20555424 20555459 5 107 4.5 9.0 6.8 0.6 144 chr2R 20555315 intergenic not near genes chr2R 20555387 intergenic not near genes chr2R 20555459 intergenic not near genes chr2R_5_20555001 chr2R_20555001 D17-c3 1279 chr2R 20577066 20577116 chr2R 20577174 20577232 6 109 0.5 0.5 0.5 4.0 166 chr2R 20577066 intron qsm - chr2R 20577149 intron qsm - chr2R 20577232 intron qsm - chr2R_6_20575001 chr2R_20575001 D17-c3 1280 chr2R 20667343 20667349 chr2R 20667480 20667486 5 136 24.5 19.0 21.8 0.2 143 chr2R 20667343 intergenic Fem-1 -,exu - chr2R 20667414 intergenic exu -,Fem-1 - chr2R 20667486 3` UTR exu - chr2R_5_20665001 chr2R_20665001 D17-c3 1281 chr2R 20739418 20739468 chr2R 20744211 20744261 F-element 28 4792 9.0 12.5 10.8 2.4 4843 chr2R 20739418 intron dpr + chr2R 20741840 intron dpr + chr2R 20744261 intron dpr + chr2R_28_20740001 chr2R_20740001 D17-c3 1282 chr2R 20757447 20757454 chr2R 20757549 20757556 4 102 4.5 17.0 10.8 0.3 109 chr2R 20757447 intergenic not near genes chr2R 20757502 intergenic not near genes chr2R 20757556 intergenic not near genes chr2R_4_20755001 chr2R_20755001 D17-c3 1283 chr2R 20783288 20783330 chr2R 20788085 20788127 F-element 17 4796 4.5 7.0 5.8 2.5 4839 chr2R 20783288 intergenic not near genes chr2R 20785708 intergenic not near genes chr2R 20788127 intergenic CG43666 - chr2R_17_20785001 chr2R_20785001 D17-c3 1284 chr2R 20962884 20962938 chr2R 20963007 20963061 25 123 3.5 6.5 5.0 4.2 177 chr2R 20962884 intergenic not near genes chr2R 20962972 intergenic not near genes chr2R 20963061 intergenic not near genes chr2R_25_20960001 chr2R_20960001 D17-c3 1285 chr2R 20967004 20967039 chr2R 20967106 20967141 5 102 11.0 2.0 6.5 0.7 137 chr2R 20967004 intergenic not near genes chr2R 20967072 intergenic not near genes chr2R 20967141 intergenic not near genes chr2R_5_20965001 chr2R_20965001 D17-c3 1286 chr2R 20970373 20970418 chr2R 20970507 20970528 22 134 9.5 9.5 9.5 2.1 155 chr2R 20970373 intergenic not near genes chr2R 20970450 intergenic not near genes chr2R 20970528 intergenic not near genes chr2R_22_20970001 chr2R_20970001 D17-c3 1287 chr2R 21040842 21040890 chr2R 21040943 21040991 18 99 6.0 4.5 5.2 2.9 149 chr2R 21040842 intergenic not near genes chr2R 21040916 intergenic not near genes chr2R 21040991 intergenic not near genes chr2R_18_21040001 chr2R_21040001 D17-c3 1288 chr2R 21057464 21057517 chr2R 21057570 21057627 8 108 4.5 0.0 2.2 2.5 163 chr2R 21057464 intergenic shg -,cpa + chr2R 21057546 intergenic cpa +,shg - chr2R 21057627 intergenic cpa +,shg - chr2R_8_21055001 chr2R_21055001 D17-c3 1289 chr2R 21088179 21088190 chr2R 21088293 21088294 4 111 14.0 9.5 11.8 0.3 115 chr2R 21088179 intron Treh + chr2R 21088236 intron Treh + chr2R 21088294 intron Treh + chr2R_4_21085001 chr2R_21085001 D17-c3 1290 chr2R 21088201 21088218 chr2R 21088275 21088332 8 108 7.5 5.0 6.2 1.1 131 chr2R 21088201 intron Treh + chr2R 21088266 intron Treh + chr2R 21088332 intron Treh + chr2R_8_21085001 chr2R_21085001 D17-c3 1291 chr2R 21103518 21103546 chr2R 21103623 21103651 8 104 7.0 0.0 3.5 1.8 133 chr2R 21103518 intron ktub + chr2R 21103584 intron ktub + chr2R 21103651 intron ktub + chr2R_8_21100001 chr2R_21100001 D17-c3 1292 chr2R 21106084 21106089 chr2R 21106191 21106196 5 107 1.0 10.5 5.8 0.7 112 chr2R 21106084 intron ktub + chr2R 21106140 intron ktub + chr2R 21106196 intron ktub + chr2R_5_21105001 chr2R_21105001 D17-c3 1293 chr2R 21141104 21141146 chr2R 21141225 21141267 13 121 3.0 7.5 5.2 2.1 163 chr2R 21141104 intron Magi - chr2R 21141186 intron Magi - chr2R 21141267 intron Magi - chr2R_13_21140001 chr2R_21140001 D17-c3 1294 chr2R 21151097 21151138 chr2R 21153755 21153796 opus 17 2658 8.5 9.0 8.8 1.7 2699 chr2R 21151097 intron CG30389 - chr2R 21152446 intron CG30389 - chr2R 21153796 intron CG30389 - chr2R_17_21150001 chr2R_21150001 D17-c3 1295 chr2R 21180549 21180600 chr2R 21180761 21180812 4 212 28.5 37.0 32.8 0.1 263 chr2R 21180549 intron Pu + chr2R 21180680 intron Pu + chr2R 21180812 intron Pu + chr2R_4_21180001 chr2R_21180001 D17-c3 1296 chr2R 21182474 21182518 chr2R 21182583 21182627 14 108 4.5 4.0 4.2 2.7 153 chr2R 21182474 3` UTR Pu + chr2R 21182550 3` UTR Pu + chr2R 21182627 intergenic Pu + chr2R_14_21180001 chr2R_21180001 D17-c3 1297 chr2R 21188194 21188250 chr2R 21188300 21188356 14 106 8.0 7.5 7.8 1.6 162 chr2R 21188194 exon tud + chr2R 21188275 intron tud + chr2R 21188356 intron tud + chr2R_14_21185001 chr2R_21185001 D17-c3 1298 chr2R 21217331 21217334 chr2R 21217442 21217445 4 111 5.5 0.0 2.8 1.1 114 chr2R 21217331 exon CG15661 - chr2R 21217388 5` UTR CG15661 - chr2R 21217445 intron CG15661 - chr2R_4_21215001 chr2R_21215001 D17-c3 1299 chr2R 21232622 21232658 chr2R 21232817 21232853 9 195 11.5 0.0 5.8 1.3 231 chr2R 21232622 intron ASPP - chr2R 21232738 intron ASPP - chr2R 21232853 intron ASPP - chr2R_9_21230001 chr2R_21230001 D17-c3 1300 chr2R 21247489 21247521 chr2R 21247996 21248027 18 506 8.5 11.5 10.0 1.6 538 chr2R 21247489 intron ASPP - chr2R 21247758 intron ASPP - chr2R 21248027 intron ASPP - chr2R_18_21245001 chr2R_21245001 D17-c3 1301 chr2R 21251794 21251851 chr2R 21252046 21252103 15 252 4.0 7.0 5.5 2.3 309 chr2R 21251794 intergenic not near genes chr2R 21251948 intergenic not near genes chr2R 21252103 intergenic not near genes chr2R_15_21250001 chr2R_21250001 D17-c3 1302 chr2R 21259639 21259664 chr2R 21259743 21259768 8 103 8.0 16.5 12.2 0.6 129 chr2R 21259639 intron Rgk3 + chr2R 21259704 intron Rgk3 + chr2R 21259768 intron Rgk3 + chr2R_8_21255001 chr2R_21255001 D17-c3 1303 chr2R 21322916 21322969 chr2R 21323023 21323078 32 107 12.5 11.5 12.0 2.5 162 chr2R 21322916 5` UTR CG30394 - chr2R 21322997 5` UTR CG30394 - chr2R 21323078 intron CG30394 - chr2R_32_21320001 chr2R_21320001 D17-c3 1304 chr2R 21421315 21421353 chr2R 21421419 21421457 19 104 7.5 6.5 7.0 2.4 142 chr2R 21421315 intron Sdc - chr2R 21421386 intron Sdc - chr2R 21421457 intron Sdc - chr2R_19_21420001 chr2R_21420001 D17-c3 1305 chr2R 21470900 21470938 chr2R 21471003 21471011 8 99 6.0 0.0 3.0 2.0 111 chr2R 21470900 intron Sdc - chr2R 21470956 intron Sdc - chr2R 21471011 intron Sdc - chr2R_8_21470001 chr2R_21470001 D17-c3 1306 chr2R 21522073 21522085 chr2R 21522232 21522244 4 159 3.5 11.5 7.5 0.5 171 chr2R 21522073 intergenic CG30289 -,Egfr + chr2R 21522158 intergenic Egfr +,CG30289 - chr2R 21522244 intergenic Egfr +,CG30289 - chr2R_4_21520001 chr2R_21520001 D17-c3 1307 chr2R 21546761 21546820 chr2R 21546867 21546926 23 102 6.5 5.0 5.8 3.4 165 chr2R 21546761 intron Egfr + chr2R 21546844 intron Egfr + chr2R 21546926 intron Egfr + chr2R_23_21545001 chr2R_21545001 D17-c3 1308 chr2R 21592833 21592843 chr2R 21592932 21592947 7 103 18.0 14.5 16.2 0.4 114 chr2R 21592833 intergenic not near genes chr2R 21592890 intergenic not near genes chr2R 21592947 intergenic not near genes chr2R_7_21590001 chr2R_21590001 D17-c3 1309 chr2R 21592844 21592852 chr2R 21592927 21592960 9 104 17.0 12.5 14.8 0.6 116 chr2R 21592844 intergenic not near genes chr2R 21592902 intergenic not near genes chr2R 21592960 intergenic not near genes chr2R_9_21590001 chr2R_21590001 D17-c3 1310 chr2R 21593553 21593582 chr2R 21594288 21594306 12 731 19.0 15.5 17.2 0.7 753 chr2R 21593553 intergenic not near genes chr2R 21593930 intergenic not near genes chr2R 21594306 intergenic not near genes chr2R_12_21590001 chr2R_21590001 D17-c3 1311 chr2R 21593584 21593608 chr2R 21594284 21594343 24 721 9.0 13.5 11.2 2.0 759 chr2R 21593584 intergenic not near genes chr2R 21593964 intergenic not near genes chr2R 21594343 intergenic not near genes chr2R_24_21590001 chr2R_21590001 D17-c3 1312 chr2R 21660379 21660412 chr2R 21660663 21660686 5 281 1.5 2.5 2.0 1.7 307 chr2R 21660379 intergenic Rae1 - chr2R 21660532 intergenic pirk - chr2R 21660686 intergenic pirk - chr2R_5_21660001 chr2R_21660001 D17-c3 1313 chr2R 21700133 21700185 chr2R 21700244 21700296 26 109 8.5 10.0 9.2 2.5 163 chr2R 21700133 intron HmgZ - chr2R 21700214 intron HmgZ - chr2R 21700296 intron HmgZ - chr2R_26_21700001 chr2R_21700001 D17-c3 1314 chr2R 21738256 21738305 chr2R 21747441 21747490 roo 26 9181 5.0 9.5 7.2 3.2 9234 chr2R 21738256 intergenic not near genes chr2R 21742873 intergenic not near genes chr2R 21747490 intergenic not near genes chr2R_26_21740001 chr2R_21740001 D17-c3 1315 chr2R 21753067 21753112 chr2R 21753572 21753622 roo 16 510 5.5 8.0 6.8 2.1 555 chr2R 21753067 intergenic not near genes chr2R 21753344 intergenic not near genes chr2R 21753622 intergenic not near genes chr2R_16_21750001 chr2R_21750001 D17-c3 1316 chr2R 21802406 21802447 chr2R 21802522 21802563 4 116 4.5 5.5 5.0 0.7 157 chr2R 21802406 intergenic not near genes chr2R 21802484 intergenic not near genes chr2R 21802563 intergenic not near genes chr2R_4_21800001 chr2R_21800001 D17-c3 1317 chr2R 21809501 21809553 chr2R 21817766 21817818 roo 23 8265 8.0 5.0 6.5 3.1 8317 chr2R 21809501 intergenic not near genes chr2R 21813660 intergenic not near genes chr2R 21817818 intergenic not near genes chr2R_23_21810001 chr2R_21810001 D17-c3 1318 chr2R 21842975 21842981 chr2R 21843079 21843085 6 104 6.5 3.0 4.8 1.0 110 chr2R 21842975 intergenic not near genes chr2R 21843030 intergenic not near genes chr2R 21843085 intergenic not near genes chr2R_6_21840001 chr2R_21840001 D17-c3 1319 chr2R 21886109 21886168 chr2R 21886213 21886293 11 112 6.5 1.5 4.0 2.2 184 chr2R 21886109 intron Fili + chr2R 21886201 intron Fili + chr2R 21886293 intron Fili + chr2R_11_21885001 chr2R_21885001 D17-c3 1320 chr2R 21888294 21888320 chr2R 21888410 21888431 9 115 5.5 10.0 7.8 1.0 137 chr2R 21888294 intron Fili + chr2R 21888362 intron Fili + chr2R 21888431 intron Fili + chr2R_9_21885001 chr2R_21885001 D17-c3 1321 chr2R 21889580 21889586 chr2R 21889698 21889704 5 118 6.5 7.5 7.0 0.6 124 chr2R 21889580 intron Fili + chr2R 21889642 intron Fili + chr2R 21889704 intron Fili + chr2R_5_21885001 chr2R_21885001 D17-c3 1322 chr2R 21906245 21906290 chr2R 21906371 21906416 13 126 7.0 5.5 6.2 1.8 171 chr2R 21906245 intron Fili + chr2R 21906330 intron Fili + chr2R 21906416 intron Fili + chr2R_13_21905001 chr2R_21905001 D17-c3 1323 chr2R 21922581 21922622 chr2R 21922683 21922724 16 102 6.5 5.0 5.8 2.4 143 chr2R 21922581 intron Fili + chr2R 21922652 intron Fili + chr2R 21922724 intron Fili + chr2R_16_21920001 chr2R_21920001 D17-c3 1324 chr2R 21932226 21932282 chr2R 21932329 21932385 27 99 1.5 2.5 2.0 9.0 159 chr2R 21932226 intron Fili + chr2R 21932306 intron Fili + chr2R 21932385 intron Fili + chr2R_27_21930001 chr2R_21930001 D17-c3 1325 chr2R 21937369 21937375 chr2R 21937496 21937516 10 127 54.0 78.0 66.0 0.1 147 chr2R 21937369 intron Fili + chr2R 21937442 intron Fili + chr2R 21937516 intron Fili + chr2R_10_21935001 chr2R_21935001 D17-c3 1326 chr2R 21985520 21985561 chr2R 21985626 21985666 19 106 5.5 6.5 6.0 2.7 146 chr2R 21985520 intergenic CG30401 - chr2R 21985593 intergenic CG30401 - chr2R 21985666 3` UTR CG30401 - chr2R_19_21985001 chr2R_21985001 D17-c3 1327 chr2R 22003062 22003115 chr2R 22003173 22003226 30 110 12.0 2.0 7.0 3.8 164 chr2R 22003062 intron CG34370 - chr2R 22003144 intron CG34370 - chr2R 22003226 intron CG34370 - chr2R_30_22000001 chr2R_22000001 D17-c3 1328 chr2R 22004271 22004318 chr2R 22004390 22004437 13 119 6.5 4.5 5.5 2.0 166 chr2R 22004271 intron CG34370 - chr2R 22004354 intron CG34370 - chr2R 22004437 intron CG34370 - chr2R_13_22000001 chr2R_22000001 D17-c3 1329 chr2R 22029502 22029526 chr2R 22029605 22029629 5 101 4.5 2.5 3.5 1.1 127 chr2R 22029502 intron CG34370 - chr2R 22029566 intron CG34370 - chr2R 22029629 intron CG34370 - chr2R_5_22025001 chr2R_22025001 D17-c3 1330 chr2R 22033804 22033859 chr2R 22033914 22033965 13 110 3.5 3.5 3.5 2.9 161 chr2R 22033804 intron CG34370 - chr2R 22033884 intron CG34370 - chr2R 22033965 intron CG34370 - chr2R_13_22030001 chr2R_22030001 D17-c3 1331 chr2R 22040132 22040185 chr2R 22040235 22040291 22 100 9.0 5.5 7.2 2.7 159 chr2R 22040132 intergenic not near genes chr2R 22040212 intergenic not near genes chr2R 22040291 intergenic not near genes chr2R_22_22040001 chr2R_22040001 D17-c3 1332 chr2R 22047983 22048023 chr2R 22048116 22048176 27 149 12.0 6.0 9.0 2.7 193 chr2R 22047983 intergenic not near genes chr2R 22048080 intergenic not near genes chr2R 22048176 intergenic not near genes chr2R_27_22045001 chr2R_22045001 D17-c3 1333 chr2R 22182886 22182926 chr2R 22182995 22183035 9 108 6.0 4.0 5.0 1.5 149 chr2R 22182886 intergenic CG11170 -,CG11275 +,MED16 + chr2R 22182960 intergenic CG11170 -,MED16 +,CG11275 + chr2R 22183035 intergenic MED16 +,CG11170 -,CG11275 + chr2R_9_22180001 chr2R_22180001 D17-c3 1334 chr2R 22205842 22205879 chr2R 22205959 22205996 16 117 6.5 4.5 5.5 2.5 154 chr2R 22205842 intergenic CG3290 -,CG3292 - chr2R 22205919 intergenic CG3290 -,CG3292 - chr2R 22205996 intergenic CG3290 -,CG3292 - chr2R_16_22205001 chr2R_22205001 D17-c3 1335 chr2R 22248816 22248874 chr2R 22248918 22248976 35 102 8.5 9.5 9.0 3.5 160 chr2R 22248816 intron dve + chr2R 22248896 intron dve + chr2R 22248976 intron dve + chr2R_35_22245001 chr2R_22245001 D17-c3 1336 chr2R 22297703 22297727 chr2R 22297804 22297828 15 101 0.0 6.0 3.0 3.8 125 chr2R 22297703 intergenic not near genes chr2R 22297766 intergenic wdp - chr2R 22297828 intergenic wdp - chr2R_15_22295001 chr2R_22295001 D17-c3 1337 chr2R 22349671 22349717 chr2R 22351480 22351526 jockey 24 1808 6.0 9.0 7.5 2.8 1855 chr2R 22349671 intron Liprin-gamma - chr2R 22350598 intron Liprin-gamma - chr2R 22351526 intron Liprin-gamma - chr2R_24_22350001 chr2R_22350001 D17-c3 1338 chr2R 22360360 22360386 chr2R 22360818 22360828 jockey 10 456 11.5 9.5 10.5 0.9 468 chr2R 22360360 intron Liprin-gamma - chr2R 22360594 intron Liprin-gamma - chr2R 22360828 intron Liprin-gamma - chr2R_10_22360001 chr2R_22360001 D17-c3 1339 chr2R 22377781 22377838 chr2R 22377892 22377936 20 109 5.0 2.0 3.5 4.4 155 chr2R 22377781 3` UTR Rtf1 + chr2R 22377858 3` UTR Rtf1 + chr2R 22377936 3` UTR Rtf1 + chr2R_20_22375001 chr2R_22375001 D17-c3 1340 chr2R 22380338 22380346 chr2R 22380454 22380462 6 116 12.5 1.5 7.0 0.8 124 chr2R 22380338 intron wrapper + chr2R 22380400 intron wrapper + chr2R 22380462 intron wrapper + chr2R_6_22380001 chr2R_22380001 D17-c3 1341 chr2R 22453203 22453217 chr2R 22453331 22453340 6 127 0.0 8.0 4.0 1.2 137 chr2R 22453203 intergenic not near genes chr2R 22453272 intergenic not near genes chr2R 22453340 intergenic not near genes chr2R_6_22450001 chr2R_22450001 D17-c3 1342 chr2R 22460356 22460406 chr2R 22460460 22460510 24 104 3.0 7.0 5.0 4.0 154 chr2R 22460356 intron CG10384 + chr2R 22460433 intron CG10384 + chr2R 22460510 intron CG10384 + chr2R_24_22460001 chr2R_22460001 D17-c3 1343 chr2R 22477551 22477608 chr2R 22477681 22477736 34 128 6.5 7.5 7.0 4.2 185 chr2R 22477551 intergenic CG45063 - chr2R 22477644 intergenic CG45063 - chr2R 22477736 intergenic CG45063 - chr2R_34_22475001 chr2R_22475001 D17-c3 1344 chr2R 22503877 22503889 chr2R 22503997 22504009 4 120 2.5 5.0 3.8 0.8 132 chr2R 22503877 intron px - chr2R 22503943 intron px - chr2R 22504009 intron px - chr2R_4_22500001 chr2R_22500001 D17-c3 1345 chr2R 22525725 22525776 chr2R 22529305 22529356 jockey 22 3578 5.0 6.0 5.5 3.4 3631 chr2R 22525725 intron px - chr2R 22527540 intron px - chr2R 22529356 intron px - chr2R_22_22525001 chr2R_22525001 D17-c3 1346 chr2R 22575639 22575692 chr2R 22575743 22575796 24 103 5.5 9.0 7.2 2.9 157 chr2R 22575639 intron dnr1 - chr2R 22575718 intron dnr1 - chr2R 22575796 intron dnr1 - chr2R_24_22575001 chr2R_22575001 D17-c3 1347 chr2R 22580415 22580438 chr2R 22586584 22586607 diver 4 6169 5.5 3.0 4.2 0.8 6192 chr2R 22580415 intron dnr1 - chr2R 22583511 intron dnr1 - chr2R 22586607 intron dnr1 - chr2R_4_22580001 chr2R_22580001 D17-c3 1348 chr2R 22588126 22588156 chr2R 22588246 22588276 23 119 16.0 18.0 17.0 1.3 150 chr2R 22588126 intron dnr1 - chr2R 22588201 intron dnr1 - chr2R 22588276 intron dnr1 - chr2R_23_22585001 chr2R_22585001 D17-c3 1349 chr2R 22596182 22596236 chr2R 22596286 22596340 8 103 5.5 2.5 4.0 1.6 158 chr2R 22596182 3` UTR CG3927 + chr2R 22596261 3` UTR CG3927 + chr2R 22596340 3` UTR CG3927 + chr2R_8_22595001 chr2R_22595001 D17-c3 1350 chr2R 22624777 22624834 chr2R 22627570 22627627 41 2795 20.0 77.5 48.8 0.8 2850 chr2R 22624777 intron CG33143 + chr2R 22626202 intron CG33143 + chr2R 22627627 intron CG33143 + chr2R_41_22625001 chr2R_22625001 D17-c3 1351 chr2R 22756528 22756651 chr2R 22756630 22756754 12 103 8.5 21.5 15.0 0.8 226 chr2R 22756528 intron,intron CG42260 -,CR30267 + chr2R 22756641 intron,intron CG42260 -,CR30267 + chr2R 22756754 intron,intron CG42260 -,CR30267 + chr2R_12_22755001 chr2R_22755001 D17-c3 1352 chr2R 22774941 22774997 chr2R 22775385 22775426 jockey 27 443 8.5 10.0 9.2 2.6 485 chr2R 22774941 intron CG42260 - chr2R 22775184 intron CG42260 - chr2R 22775426 intron CG42260 - chr2R_27_22775001 chr2R_22775001 D17-c3 1353 chr2R 22785706 22785759 chr2R 22785809 22785862 20 103 4.5 3.5 4.0 4.0 156 chr2R 22785706 intron CG42260 - chr2R 22785784 intron CG42260 - chr2R 22785862 intron CG42260 - chr2R_20_22785001 chr2R_22785001 D17-c3 1354 chr2R 22810544 22810603 chr2R 22810685 22810744 8 141 7.0 0.0 3.5 1.8 200 chr2R 22810544 intron stl + chr2R 22810644 intron stl + chr2R 22810744 intron stl + chr2R_8_22810001 chr2R_22810001 D17-c3 1355 chr2R 22843028 22843045 chr2R 22845019 22845036 flea 8 1991 8.5 11.5 10.0 0.7 2008 chr2R 22843028 intergenic CG9826 + chr2R 22844032 intergenic not near genes chr2R 22845036 intergenic not near genes chr2R_8_22840001 chr2R_22840001 D17-c3 1356 chr2R 22907384 22907436 chr2R 22907493 22907516 41 108 17.0 23.5 20.2 1.9 132 chr2R 22907384 intron nahoda + chr2R 22907450 intron nahoda + chr2R 22907516 intron nahoda + chr2R_41_22905001 chr2R_22905001 D17-c3 1357 chr2R 22945031 22945083 chr2R 22945170 22945222 43 138 15.0 14.5 14.8 2.7 191 chr2R 22945031 exon CG42694 + chr2R 22945126 3` UTR CG42694 + chr2R 22945222 intergenic CG42694 + chr2R_43_22945001 chr2R_22945001 D17-c3 1358 chr2R 22978260 22978309 chr2R 22978363 22978413 26 103 10.5 9.0 9.8 2.4 153 chr2R 22978260 intergenic not near genes chr2R 22978336 intergenic not near genes chr2R 22978413 intergenic not near genes chr2R_26_22975001 chr2R_22975001 D17-c3 1359 chr2R 23029592 23029610 chr2R 23029694 23029712 20 102 21.0 20.0 20.5 0.9 120 chr2R 23029592 intron,intron twi +,CG42741 - chr2R 23029652 intron,intron twi +,CG42741 - chr2R 23029712 intron,intron twi +,CG42741 - chr2R_20_23025001 chr2R_23025001 D17-c3 1360 chr2R 23041180 23041201 chr2R 23041283 23041304 13 103 9.0 18.5 13.8 0.9 124 chr2R 23041180 intron,intron twi +,CG42741 - chr2R 23041242 intron,intron twi +,CG42741 - chr2R 23041304 intron,intron twi +,CG42741 - chr2R_13_23040001 chr2R_23040001 D17-c3 1361 chr2R 23084034 23084083 chr2R 23086890 23086939 17 2854 34.0 32.0 33.0 0.5 2905 chr2R 23084034 intergenic not near genes chr2R 23085486 intergenic CG9877 - chr2R 23086939 intergenic CG13538 + chr2R_17_23085001 chr2R_23085001 D17-c3 1362 chr2R 23084013 23084071 chr2R 23087240 23087297 25 3226 32.5 66.0 49.2 0.5 3284 chr2R 23084013 intergenic not near genes chr2R 23085655 intergenic CG9877 - chr2R 23087297 exon CG13538 + chr2R_25_23085001 chr2R_23085001 D17-c3 1363 chr2R 23108954 23108958 chr2R 23109061 23109065 4 107 3.0 18.5 10.8 0.3 111 chr2R 23108954 intergenic not near genes chr2R 23109010 intergenic not near genes chr2R 23109065 intergenic not near genes chr2R_4_23105001 chr2R_23105001 D17-c3 1364 chr2R 23158321 23158356 chr2R 23158423 23158431 23 100 21.0 17.0 19.0 1.1 110 chr2R 23158321 intron CG9899 + chr2R 23158376 intron CG9899 + chr2R 23158431 intron CG9899 + chr2R_23_23155001 chr2R_23155001 D17-c3 1365 chr2R 23179683 23179731 chr2R 23179874 23179922 36 189 11.5 11.5 11.5 2.9 239 chr2R 23179683 intron CG34371 - chr2R 23179802 intron CG34371 - chr2R 23179922 intron CG34371 - chr2R_36_23175001 chr2R_23175001 D17-c3 1366 chr2R 23186548 23186600 chr2R 23186651 23186703 19 103 7.5 4.0 5.8 2.8 155 chr2R 23186548 intron CG34371 - chr2R 23186626 intron CG34371 - chr2R 23186703 intron CG34371 - chr2R_19_23185001 chr2R_23185001 D17-c3 1367 chr2R 23188533 23188581 chr2R 23188636 23188684 21 103 5.0 6.0 5.5 3.2 151 chr2R 23188533 intron CG34371 - chr2R 23188608 intron CG34371 - chr2R 23188684 intron CG34371 - chr2R_21_23185001 chr2R_23185001 D17-c3 1368 chr2R 23236791 23236852 chr2R 23236914 23236971 17 119 8.0 2.5 5.2 2.7 180 chr2R 23236791 intergenic not near genes chr2R 23236881 intergenic not near genes chr2R 23236971 intergenic not near genes chr2R_17_23235001 chr2R_23235001 D17-c3 1369 chr2R 23254598 23254654 chr2R 23254703 23254759 51 103 18.5 15.0 16.8 2.9 161 chr2R 23254598 intergenic not near genes chr2R 23254678 intergenic not near genes chr2R 23254759 intergenic not near genes chr2R_51_23250001 chr2R_23250001 D17-c3 1370 chr2R 23304253 23304307 chr2R 23304645 23304694 21 391 7.5 8.5 8.0 2.3 441 chr2R 23304253 intergenic not near genes chr2R 23304474 intergenic not near genes chr2R 23304694 intergenic not near genes chr2R_21_23300001 chr2R_23300001 D17-c3 1371 chr2R 23461122 23461139 chr2R 23461224 23461241 6 102 31.0 18.0 24.5 0.2 119 chr2R 23461122 intron CG43795 + chr2R 23461182 intron CG43795 + chr2R 23461241 intron CG43795 + chr2R_6_23460001 chr2R_23460001 D17-c3 1372 chr2R 23463361 23463418 chr2R 23463465 23463522 45 103 8.0 5.0 6.5 6.0 161 chr2R 23463361 intron CG43795 + chr2R 23463442 intron CG43795 + chr2R 23463522 intron CG43795 + chr2R_45_23460001 chr2R_23460001 D17-c3 1373 chr2R 23467545 23467588 chr2R 23467700 23467743 33 153 7.0 13.5 10.2 2.9 198 chr2R 23467545 intron CG43795 + chr2R 23467644 intron CG43795 + chr2R 23467743 intron CG43795 + chr2R_33_23465001 chr2R_23465001 D17-c3 1374 chr2R 23482516 23482534 chr2R 23482619 23482637 12 103 20.0 1.0 10.5 1.0 121 chr2R 23482516 intron CG43795 + chr2R 23482576 intron CG43795 + chr2R 23482637 intron CG43795 + chr2R_12_23480001 chr2R_23480001 D17-c3 1375 chr2R 23496712 23496769 chr2R 23497072 23497129 36 360 7.5 6.5 7.0 4.5 417 chr2R 23496712 intergenic not near genes chr2R 23496920 intergenic not near genes chr2R 23497129 intergenic not near genes chr2R_36_23495001 chr2R_23495001 D17-c3 1376 chr2R 23529551 23529587 chr2R 23537152 23537188 412 24 7597 22.0 34.0 28.0 0.8 7637 chr2R 23529551 intron bw - chr2R 23533370 intron bw - chr2R 23537188 exon bw - chr2R_24_23530001 chr2R_23530001 D17-c3 1377 chr2R 23529589 23529604 chr2R 23537148 23537158 412 13 7586 14.5 27.0 20.8 0.6 7569 chr2R 23529589 intron bw - chr2R 23533374 intron bw - chr2R 23537158 exon bw - chr2R_13_23530001 chr2R_23530001 D17-c3 1378 chr2R 23553708 23553749 chr2R 23553823 23553864 13 115 8.0 12.0 10.0 1.2 156 chr2R 23553708 intron pita - chr2R 23553786 intron pita - chr2R 23553864 intron pita - chr2R_13_23550001 chr2R_23550001 D17-c3 1379 chr2R 23563866 23563920 chr2R 23563971 23564025 54 104 17.5 16.0 16.8 3.0 159 chr2R 23563866 3` UTR Pi3K59F + chr2R 23563946 3` UTR Pi3K59F + chr2R 23564025 3` UTR,5` UTR Pi3K59F +,CG30184 + chr2R_54_23560001 chr2R_23560001 D17-c3 1380 chr2R 23588071 23588075 chr2R 23588173 23588177 4 102 9.5 21.5 15.5 0.2 106 chr2R 23588071 intron apt + chr2R 23588124 intron apt + chr2R 23588177 intron apt + chr2R_4_23585001 chr2R_23585001 D17-c3 1381 chr2R 23589154 23589194 chr2R 23589256 23589296 38 102 23.5 24.0 23.8 1.5 142 chr2R 23589154 intron apt + chr2R 23589225 intron apt + chr2R 23589296 intron apt + chr2R_38_23585001 chr2R_23585001 D17-c3 1382 chr2R 23607010 23607191 chr2R 23607116 23607309 47 112 3.5 4.0 3.8 9.8 299 chr2R 23607010 intron CG17664 - chr2R 23607160 intron CG17664 - chr2R 23607309 intron CG17664 - chr2R_47_23605001 chr2R_23605001 D17-c3 1383 chr2R 23705624 23705682 chr2R 23710877 23710935 37 5253 154.0 124.5 139.2 0.3 5311 chr2R 23705624 exon l(2)not - chr2R 23708280 intron,exon l(2)not -,l(2)tid + chr2R 23710935 intergenic not near genes chr2R_37_23705001 chr2R_23705001 D17-c3 1384 chr2R 23719791 23719820 chr2R 23720019 23720061 29 235 12.5 10.5 11.5 2.3 270 chr2R 23719791 intron,exon Sesn +,CG18128 - chr2R 23719926 intron,5` UTR Sesn +,CG18128 - chr2R 23720061 intron Sesn + chr2R_29_23715001 chr2R_23715001 D17-c3 1385 chr2R 23744738 23744795 chr2R 23744842 23744899 31 104 9.5 13.0 11.2 2.5 161 chr2R 23744738 intron egl - chr2R 23744818 intron egl - chr2R 23744899 intron egl - chr2R_31_23740001 chr2R_23740001 D17-c3 1386 chr2R 23784446 23784507 chr2R 23784549 23784610 35 103 6.0 7.5 6.8 4.5 164 chr2R 23784446 intron CG9850 - chr2R 23784528 intron CG9850 - chr2R 23784610 intron CG9850 - chr2R_35_23780001 chr2R_23780001 D17-c3 1387 chr2R 23824110 23824167 chr2R 23824226 23824282 28 116 15.5 8.0 11.8 2.2 172 chr2R 23824110 intron,intron CG5549 +,CG4763 - chr2R 23824196 intron,intron CG5549 +,CG4763 - chr2R 23824282 intron,intron CG5549 +,CG4763 - chr2R_28_23820001 chr2R_23820001 D17-c3 1388 chr2R 23877718 23877760 chr2R 23878214 23878256 297 6 494 5.5 7.0 6.2 0.8 538 chr2R 23877718 intergenic ken +,TM4SF + chr2R 23877987 intergenic TM4SF + chr2R 23878256 5` UTR TM4SF + chr2R_6_23875001 chr2R_23875001 D17-c3 1389 chr2R 23914284 23914332 chr2R 23921933 23921981 412 52 7649 17.5 28.5 23.0 2.2 7697 chr2R 23914284 exon kcc + chr2R 23918132 intron kcc + chr2R 23921981 exon kcc + chr2R_52_23915001 chr2R_23915001 D17-c3 1390 chr2R 23986487 23986544 chr2R 23986592 23986649 36 104 6.0 9.5 7.8 4.1 162 chr2R 23986487 intron Phm - chr2R 23986568 intron Phm - chr2R 23986649 intron,5` UTR Phm -,CG30178 + chr2R_36_23985001 chr2R_23985001 D17-c3 1391 chr2R 24008384 24008442 chr2R 24008495 24008553 47 110 12.5 16.0 14.2 3.1 169 chr2R 24008384 intron Unc-89 - chr2R 24008468 intron Unc-89 - chr2R 24008553 intron Unc-89 - chr2R_47_24005001 chr2R_24005001 D17-c3 1392 chr2R 24060027 24060032 chr2R 24060130 24060135 6 103 8.5 6.0 7.2 0.7 108 chr2R 24060027 intergenic CR44814 -,RpL12 + chr2R 24060081 intergenic CR44814 -,RpL12 + chr2R 24060135 intergenic CR44814 -,RpL12 + chr2R_6_24060001 chr2R_24060001 D17-c3 1393 chr2R 24107391 24107445 chr2R 24107497 24107530 22 98 6.0 9.0 7.5 2.6 139 chr2R 24107391 3` UTR CG4049 - chr2R 24107460 3` UTR CG4049 - chr2R 24107530 3` UTR CG4049 - chr2R_22_24105001 chr2R_24105001 D17-c3 1394 chr2R 24147041 24147097 chr2R 24154644 24154700 412 44 7600 11.5 13.0 12.2 3.3 7659 chr2R 24147041 intron Dat + chr2R 24150870 intron Dat + chr2R 24154700 intron Dat + chr2R_44_24150001 chr2R_24150001 D17-c3 1395 chr2R 24177211 24177259 chr2R 24184721 24184769 412 21 7509 9.0 7.5 8.2 2.3 7558 chr2R 24177211 3` UTR Nop60B + chr2R 24180990 intron Nop60B + chr2R 24184769 3` UTR Nop60B + chr2R_21_24180001 chr2R_24180001 D17-c3 1396 chr2R 24272801 24272813 chr2R 24272904 24272914 roo 7 101 32.5 29.0 30.8 0.2 113 chr2R 24272801 intergenic not near genes chr2R 24272858 intergenic not near genes chr2R 24272914 intergenic not near genes chr2R_7_24270001 chr2R_24270001 D17-c3 1397 chr2R 24303499 24303537 chr2R 24303603 24303641 19 101 16.0 14.5 15.2 1.2 142 chr2R 24303499 intergenic not near genes chr2R 24303570 intergenic not near genes chr2R 24303641 intergenic not near genes chr2R_19_24300001 chr2R_24300001 D17-c3 1398 chr2R 24353432 24353441 chr2R 24361819 24361828 roo 5 8387 7.5 10.5 9.0 0.5 8396 chr2R 24353432 intron,intron bs +,CR44811 - chr2R 24357630 intron,intron bs +,CR44811 - chr2R 24361828 intron,intron bs +,CR44811 - chr2R_5_24355001 chr2R_24355001 D17-c3 1399 chr2R 24430922 24431094 chr2R 24431008 24431195 26 101 11.5 12.5 12.0 2.0 273 chr2R 24430922 intergenic CG15873 -,Pgam5-2 - chr2R 24431058 intergenic Pgam5-2 -,CG15873 - chr2R 24431195 intergenic Pgam5-2 -,CG15873 - chr2R_26_24430001 chr2R_24430001 D17-c3 1400 chr2R 24432735 24432793 chr2R 24433266 24433324 27 531 7.0 7.0 7.0 3.4 589 chr2R 24432735 intergenic Pgam5-2 - chr2R 24433030 intergenic Pgam5-2 - chr2R 24433324 intergenic not near genes chr2R_27_24430001 chr2R_24430001 D17-c3 1401 chr2R 24493068 24493088 chr2R 24493182 24493202 11 114 7.0 12.5 9.8 1.0 134 chr2R 24493068 intergenic CG13590 -,CG13589 - chr2R 24493135 intergenic CG13590 -,CG13589 - chr2R 24493202 intergenic CG13590 -,CG13589 - chr2R_11_24490001 chr2R_24490001 D17-c3 1402 chr2R 24509290 24509340 chr2R 24509400 24509450 14 110 3.0 8.5 5.8 2.1 160 chr2R 24509290 intergenic Letm1 - chr2R 24509370 intergenic Letm1 - chr2R 24509450 intergenic Letm1 - chr2R_14_24505001 chr2R_24505001 D17-c3 1403 chr2R 24590074 24590145 chr2R 24590207 24590261 18 128 1.0 10.0 5.5 2.8 187 chr2R 24590074 intron pio + chr2R 24590168 intron pio + chr2R 24590261 intron pio + chr2R_18_24590001 chr2R_24590001 D17-c3 1404 chr2R 24647568 24647615 chr2R 24655150 24655197 412 24 7582 9.0 7.0 8.0 2.7 7629 chr2R 24647568 intergenic not near genes chr2R 24651382 intergenic not near genes chr2R 24655197 intergenic not near genes chr2R_24_24650001 chr2R_24650001 D17-c3 1405 chr2R 24727860 24727910 chr2R 24735393 24735428 mdg1 32 7530 10.5 9.5 10.0 2.9 7568 chr2R 24727860 intron Mid1 - chr2R 24731644 intron Mid1 - chr2R 24735428 intron Mid1 - chr2R_32_24730001 chr2R_24730001 D17-c3 1406 chr2R 24751644 24751699 chr2R 24751747 24751802 25 103 7.5 4.5 6.0 3.6 158 chr2R 24751644 intron CG30421 + chr2R 24751723 intron CG30421 + chr2R 24751802 intron CG30421 + chr2R_25_24750001 chr2R_24750001 D17-c3 1407 chr2R 24763586 24763611 chr2R 24765587 24765612 G2 22 1999 19.5 11.5 15.5 1.3 2026 chr2R 24763586 exon CG3894 + chr2R 24764599 intron CG3894 + chr2R 24765612 exon CG3894 + chr2R_22_24760001 chr2R_24760001 D17-c3 1408 chr2R 24763614 24763644 chr2R 24765585 24765639 G2 25 1996 9.0 9.5 9.2 2.5 2025 chr2R 24763614 exon CG3894 + chr2R 24764626 intron CG3894 + chr2R 24765639 exon CG3894 + chr2R_25_24760001 chr2R_24760001 D17-c3 1409 chr2R 24846440 24846445 chr2R 24846548 24846553 7 108 23.5 31.5 27.5 0.2 113 chr2R 24846440 intergenic not near genes chr2R 24846496 intergenic not near genes chr2R 24846553 intergenic not near genes chr2R_7_24845001 chr2R_24845001 D17-c3 1410 chr2R 24859815 24859869 chr2R 24859926 24859980 15 111 6.5 4.5 5.5 2.3 165 chr2R 24859815 5` UTR CR44829 + chr2R 24859898 5` UTR CR44829 + chr2R 24859980 5` UTR CR44829 + chr2R_15_24855001 chr2R_24855001 D17-c3 1411 chr2R 24884026 24884078 chr2R 24884133 24884185 18 107 3.0 2.5 2.8 4.7 159 chr2R 24884026 intron NKAIN + chr2R 24884106 intron NKAIN + chr2R 24884185 intron NKAIN + chr2R_18_24880001 chr2R_24880001 D17-c3 1412 chr2R 24953251 24953305 chr2R 24953359 24953413 22 107 9.0 8.0 8.5 2.3 162 chr2R 24953251 exon CG12851 + chr2R 24953332 3` UTR CG12851 + chr2R 24953413 3` UTR CG12851 + chr2R_22_24950001 chr2R_24950001 D17-c3 1413 chr2R 25022615 25022673 chr2R 25022724 25022782 24 109 6.0 6.5 6.2 3.3 167 chr2R 25022615 intron uzip + chr2R 25022698 intron uzip + chr2R 25022782 intron uzip + chr2R_24_25020001 chr2R_25020001 D17-c3 1414 chr2R 25081589 25081634 chr2R 25082710 25082755 5 1119 24.5 20.5 22.5 0.2 1166 chr2R 25081589 intron gol - chr2R 25082172 intron gol - chr2R 25082755 intron gol - chr2R_5_25080001 chr2R_25080001 D17-c3 1415 chr2R 25101249 25101308 chr2R 25101376 25101435 30 127 8.0 7.0 7.5 3.5 186 chr2R 25101249 intron lov - chr2R 25101342 intron lov - chr2R 25101435 intron lov - chr2R_30_25100001 chr2R_25100001 D17-c3 1416 chr2R 25141636 25141682 chr2R 25159351 25159397 roo 11 17715 3.5 4.5 4.0 2.2 17761 chr2R 25141636 intergenic not near genes chr2R 25150516 intergenic not near genes chr2R 25159397 intergenic not near genes chr2R_11_25150001 chr2R_25150001 D17-c3 1417 chr2R 25180749 25180794 chr2R 25180851 25180896 10 102 3.5 5.5 4.5 1.8 147 chr2R 25180749 intergenic not near genes chr2R 25180822 intergenic not near genes chr2R 25180896 intergenic not near genes chr2R_10_25180001 chr2R_25180001 D17-c3 1418 chr2R 25207811 25207845 chr2R 25208228 25208262 5 417 20.0 24.5 22.2 0.2 451 chr2R 25207811 5` UTR CG9380 - chr2R 25208036 intron CG9380 - chr2R 25208262 intron CG9380 - chr2R_5_25205001 chr2R_25205001 D17-c3 1419 chr3L 86436 86481 chr3L 86540 86585 5 103 3.5 3.5 3.5 1.1 149 chr3L 86436 intergenic not near genes chr3L 86510 intergenic not near genes chr3L 86585 intergenic not near genes chr3L_5_85001 chr3L_85001 D17-c3 1420 chr3L 87035 87089 chr3L 87342 87396 16 307 2.5 4.0 3.2 3.8 361 chr3L 87035 intergenic not near genes chr3L 87216 intergenic not near genes chr3L 87396 intergenic not near genes chr3L_16_85001 chr3L_85001 D17-c3 1421 chr3L 99657 99697 chr3L 99758 99801 9 109 3.0 2.5 2.8 2.4 144 chr3L 99657 intergenic not near genes chr3L 99729 intergenic not near genes chr3L 99801 intergenic not near genes chr3L_9_95001 chr3L_95001 D17-c3 1422 chr3L 105718 105773 chr3L 105837 105893 7 120 2.5 5.5 4.0 1.4 175 chr3L 105718 intergenic not near genes chr3L 105806 intergenic not near genes chr3L 105893 intergenic not near genes chr3L_7_105001 chr3L_105001 D17-c3 1423 chr3L 108926 108976 chr3L 109030 109070 16 103 5.5 5.0 5.2 2.6 144 chr3L 108926 intergenic not near genes chr3L 108998 intergenic not near genes chr3L 109070 intergenic not near genes chr3L_16_105001 chr3L_105001 D17-c3 1424 chr3L 110195 110231 chr3L 119387 119423 roo 5 9192 3.5 3.5 3.5 1.1 9228 chr3L 110195 intergenic not near genes chr3L 114809 intergenic not near genes chr3L 119423 intergenic not near genes chr3L_5_110001 chr3L_110001 D17-c3 1425 chr3L 365503 365556 chr3L 365614 365667 9 111 2.0 4.0 3.0 2.2 164 chr3L 365503 3` UTR CG1233 + chr3L 365585 3` UTR CG1233 + chr3L 365667 3` UTR,3` UTR CG1233 +,CG13884 - chr3L_9_365001 chr3L_365001 D17-c3 1426 chr3L 393152 393211 chr3L 393276 393278 6 114 2.5 0.5 1.5 2.4 126 chr3L 393152 3` UTR CR45378 - chr3L 393215 3` UTR CR45378 - chr3L 393278 intergenic CR45378 -,CR43969 + chr3L_6_390001 chr3L_390001 D17-c3 1427 chr3L 402665 402717 chr3L 409743 409795 297 18 7078 3.0 8.0 5.5 2.8 7130 chr3L 402665 intergenic not near genes chr3L 406230 intergenic not near genes chr3L 409795 intergenic not near genes chr3L_18_405001 chr3L_405001 D17-c3 1428 chr3L 459952 460006 chr3L 460054 460108 9 101 5.0 5.0 5.0 1.5 156 chr3L 459952 intron klar - chr3L 460030 intron klar - chr3L 460108 intron klar - chr3L_9_460001 chr3L_460001 D17-c3 1429 chr3L 494585 494606 chr3L 494692 494713 6 107 6.5 1.0 3.8 1.2 128 chr3L 494585 intron klar - chr3L 494649 intron klar - chr3L 494713 intron klar - chr3L_6_490001 chr3L_490001 D17-c3 1430 chr3L 540700 540747 chr3L 540819 540866 17 119 5.5 8.0 6.8 2.2 166 chr3L 540700 intergenic klar -,CG17180 + chr3L 540783 intergenic CG17180 +,klar - chr3L 540866 5` UTR CG17180 + chr3L_17_540001 chr3L_540001 D17-c3 1431 chr3L 563944 564000 chr3L 564148 564204 22 203 4.5 6.0 5.2 3.5 260 chr3L 563944 intron hipk + chr3L 564074 intron hipk + chr3L 564204 intron hipk + chr3L_22_560001 chr3L_560001 D17-c3 1432 chr3L 642456 642499 chr3L 642560 642615 15 112 6.0 10.5 8.2 1.6 159 chr3L 642456 5` UTR CR43334 + chr3L 642536 5` UTR CR43334 + chr3L 642615 5` UTR CR43334 + chr3L_15_640001 chr3L_640001 D17-c3 1433 chr3L 647928 647985 chr3L 650636 650693 63 2704 12.5 17.0 14.8 4.0 2765 chr3L 647928 intergenic not near genes chr3L 649310 exon Gale + chr3L 650693 exon Gale + chr3L_63_645001 chr3L_645001 D17-c3 1434 chr3L 651364 651418 chr3L 651477 651531 45 113 16.5 11.5 14.0 3.0 167 chr3L 651364 intergenic Gale +,CG3402 - chr3L 651448 intergenic CG3402 -,Gale + chr3L 651531 intergenic CG3402 -,Gale + chr3L_45_650001 chr3L_650001 D17-c3 1435 chr3L 705873 705926 chr3L 705994 706047 20 121 5.5 3.0 4.2 3.8 174 chr3L 705873 intergenic CG13895 -,CR44514 + chr3L 705960 3` UTR CG13895 - chr3L 706047 3` UTR CG13895 - chr3L_20_705001 chr3L_705001 D17-c3 1436 chr3L 789891 789946 chr3L 790401 790456 roo 14 510 4.0 3.5 3.8 2.9 565 chr3L 789891 intergenic not near genes chr3L 790174 intergenic not near genes chr3L 790456 intergenic not near genes chr3L_14_790001 chr3L_790001 D17-c3 1437 chr3L 857977 858031 chr3L 866482 866520 Tirant 19 8501 7.0 10.0 8.5 2.0 8543 chr3L 857977 intergenic not near genes chr3L 862248 intergenic not near genes chr3L 866520 5` UTR CG12502 + chr3L_19_860001 chr3L_860001 D17-c3 1438 chr3L 905081 905090 chr3L 905190 905199 5 109 0.0 3.5 1.8 1.8 118 chr3L 905081 intergenic not near genes chr3L 905140 intergenic not near genes chr3L 905199 intergenic not near genes chr3L_5_905001 chr3L_905001 D17-c3 1439 chr3L 925173 925204 chr3L 932624 932655 mdg1 6 7451 1.5 4.0 2.8 1.6 7482 chr3L 925173 intron Glut1 + chr3L 928914 intron Glut1 + chr3L 932655 intron Glut1 + chr3L_6_925001 chr3L_925001 D17-c3 1440 chr3L 933886 933942 chr3L 934015 934070 11 128 2.5 3.5 3.0 2.8 184 chr3L 933886 intron Glut1 + chr3L 933978 intron Glut1 + chr3L 934070 intron Glut1 + chr3L_11_930001 chr3L_930001 D17-c3 1441 chr3L 939754 939794 chr3L 940900 940940 jockey 13 1146 5.5 6.5 6.0 1.9 1186 chr3L 939754 intron Glut1 + chr3L 940347 intron Glut1 + chr3L 940940 intron Glut1 + chr3L_13_940001 chr3L_940001 D17-c3 1442 chr3L 987448 987472 chr3L 987550 987574 6 102 19.0 20.5 19.8 0.3 126 chr3L 987448 intergenic not near genes chr3L 987511 intergenic not near genes chr3L 987574 intergenic not near genes chr3L_6_985001 chr3L_985001 D17-c3 1443 chr3L 1033337 1033344 chr3L 1033458 1033465 6 120 0.0 0.0 0.0 6.0 128 chr3L 1033337 intron trio - chr3L 1033401 intron trio - chr3L 1033465 intron trio - chr3L_6_1030001 chr3L_1030001 D17-c3 1444 chr3L 1040523 1040580 chr3L 1040632 1040689 18 109 4.0 4.0 4.0 3.6 166 chr3L 1040523 intron bab1 - chr3L 1040606 intron bab1 - chr3L 1040689 intron bab1 - chr3L_18_1040001 chr3L_1040001 D17-c3 1445 chr3L 1047382 1047385 chr3L 1055164 1055213 412 5 7806 2.5 3.5 3.0 1.2 7831 chr3L 1047382 intron bab1 - chr3L 1051298 intron bab1 - chr3L 1055213 intron bab1 - chr3L_5_1050001 chr3L_1050001 D17-c3 1446 chr3L 1077738 1077787 chr3L 1078039 1078088 10 301 1.5 4.0 2.8 2.6 350 chr3L 1077738 intron bab1 - chr3L 1077913 intron bab1 - chr3L 1078088 intron bab1 - chr3L_10_1075001 chr3L_1075001 D17-c3 1447 chr3L 1109607 1109662 chr3L 1109720 1109775 16 113 7.0 3.5 5.2 2.6 168 chr3L 1109607 intergenic not near genes chr3L 1109691 intergenic not near genes chr3L 1109775 intergenic not near genes chr3L_16_1105001 chr3L_1105001 D17-c3 1448 chr3L 1145215 1145244 chr3L 1145319 1145348 7 104 3.5 2.5 3.0 1.8 133 chr3L 1145215 intron bab2 - chr3L 1145282 intron bab2 - chr3L 1145348 intron bab2 - chr3L_7_1145001 chr3L_1145001 D17-c3 1449 chr3L 1154117 1154160 chr3L 1163292 1163335 roo 26 9175 7.5 7.0 7.2 3.2 9218 chr3L 1154117 intron bab2 - chr3L 1158726 intron bab2 - chr3L 1163335 intron bab2 - chr3L_26_1155001 chr3L_1155001 D17-c3 1450 chr3L 1219576 1219590 chr3L 1227332 1227348 412 8 7758 19.5 10.0 14.8 0.5 7772 chr3L 1219576 intron mwh + chr3L 1223462 intron mwh + chr3L 1227348 intron mwh + chr3L_8_1220001 chr3L_1220001 D17-c3 1451 chr3L 1219591 1219592 chr3L 1227328 1227335 412 6 7740 19.5 8.5 14.0 0.4 7744 chr3L 1219591 intron mwh + chr3L 1223463 intron mwh + chr3L 1227335 intron mwh + chr3L_6_1220001 chr3L_1220001 D17-c3 1452 chr3L 1219594 1219622 chr3L 1227327 1227380 412 32 7753 8.0 8.0 8.0 3.6 7786 chr3L 1219594 intron mwh + chr3L 1223487 intron mwh + chr3L 1227380 intron mwh + chr3L_32_1220001 chr3L_1220001 D17-c3 1453 chr3L 1257621 1257656 chr3L 1257726 1257760 7 105 7.0 14.0 10.5 0.6 139 chr3L 1257621 intron CG9134 + chr3L 1257690 intron CG9134 + chr3L 1257760 intron CG9134 + chr3L_7_1255001 chr3L_1255001 D17-c3 1454 chr3L 1260120 1260164 chr3L 1260225 1260269 24 104 5.0 7.5 6.2 3.3 149 chr3L 1260120 intron CG9134 + chr3L 1260194 intron CG9134 + chr3L 1260269 intron CG9134 + chr3L_24_1260001 chr3L_1260001 D17-c3 1455 chr3L 1347134 1347193 chr3L 1347243 1347272 72 107 12.5 16.0 14.2 4.7 138 chr3L 1347134 intron Ptp61F - chr3L 1347203 intron Ptp61F - chr3L 1347272 intron Ptp61F - chr3L_72_1345001 chr3L_1345001 D17-c3 1456 chr3L 1356990 1357139 chr3L 1357092 1357243 9 102 25.5 24.5 25.0 0.3 253 chr3L 1356990 intron Ptp61F - chr3L 1357116 intron Ptp61F - chr3L 1357243 intron Ptp61F - chr3L_9_1355001 chr3L_1355001 D17-c3 1457 chr3L 1364013 1364064 chr3L 1364124 1364175 10 111 6.0 10.5 8.2 1.1 162 chr3L 1364013 intron Ptp61F - chr3L 1364094 intron Ptp61F - chr3L 1364175 intron Ptp61F - chr3L_10_1360001 chr3L_1360001 D17-c3 1458 chr3L 1371676 1371696 chr3L 1371885 1371904 6 209 22.0 18.5 20.2 0.3 228 chr3L 1371676 intron,intron Ptp61F -,ru + chr3L 1371790 intron,intron Ptp61F -,ru + chr3L 1371904 intron,intron Ptp61F -,ru + chr3L_6_1370001 chr3L_1370001 D17-c3 1459 chr3L 1372354 1372377 chr3L 1372457 1372480 5 103 6.5 8.5 7.5 0.6 126 chr3L 1372354 intron,intron Ptp61F -,ru + chr3L 1372417 intron,intron Ptp61F -,ru + chr3L 1372480 intron,intron Ptp61F -,ru + chr3L_5_1370001 chr3L_1370001 D17-c3 1460 chr3L 1385149 1385199 chr3L 1385262 1385312 13 113 16.5 17.0 16.8 0.7 163 chr3L 1385149 intron,intron Ptp61F -,ru + chr3L 1385230 intron,intron Ptp61F -,ru + chr3L 1385312 intron,intron Ptp61F -,ru + chr3L_13_1385001 chr3L_1385001 D17-c3 1461 chr3L 1396713 1396755 chr3L 1396822 1396864 14 106 31.0 33.0 32.0 0.4 151 chr3L 1396713 intron Ptp61F - chr3L 1396788 intron Ptp61F - chr3L 1396864 intron Ptp61F - chr3L_14_1395001 chr3L_1395001 D17-c3 1462 chr3L 1415752 1415808 chr3L 1415858 1415879 28 105 30.5 32.0 31.2 0.9 127 chr3L 1415752 intron Ptp61F - chr3L 1415816 intron Ptp61F - chr3L 1415879 intron Ptp61F - chr3L_28_1415001 chr3L_1415001 D17-c3 1463 chr3L 1424766 1424769 chr3L 1430021 1430039 Rt1a 7 5269 2.5 18.5 10.5 0.6 5273 chr3L 1424766 intron Ptp61F - chr3L 1427402 intron Ptp61F - chr3L 1430039 intron Ptp61F - chr3L_7_1425001 chr3L_1425001 D17-c3 1464 chr3L 1477371 1477388 chr3L 1477486 1477503 5 115 16.5 9.0 12.8 0.4 132 chr3L 1477371 intron stet - chr3L 1477437 intron stet - chr3L 1477503 intron stet - chr3L_5_1475001 chr3L_1475001 D17-c3 1465 chr3L 1485716 1485743 chr3L 1486908 1486919 1360 17 1190 10.5 22.0 16.2 1.0 1203 chr3L 1485716 intron stet - chr3L 1486318 intron stet - chr3L 1486919 intron stet - chr3L_17_1485001 chr3L_1485001 D17-c3 1466 chr3L 1501970 1502021 chr3L 1502076 1502125 23 101 23.5 29.0 26.2 0.8 155 chr3L 1501970 intron pUf68 - chr3L 1502048 intron pUf68 - chr3L 1502125 intron pUf68 - chr3L_23_1500001 chr3L_1500001 D17-c3 1467 chr3L 1505976 1506031 chr3L 1513598 1513653 17.6 37 7622 12.5 10.5 11.5 3.0 7677 chr3L 1505976 intron,intron Psa +,cue - chr3L 1509814 intron,intron Psa +,cue - chr3L 1513653 intron,intron Psa +,cue - chr3L_37_1505001 chr3L_1505001 D17-c3 1468 chr3L 1585913 1585931 chr3L 1586019 1586037 7 106 4.5 5.0 4.8 1.2 124 chr3L 1585913 intron CG13917 + chr3L 1585975 intron CG13917 + chr3L 1586037 intron CG13917 + chr3L_7_1585001 chr3L_1585001 D17-c3 1469 chr3L 1639206 1639244 chr3L 1639411 1639450 22 205 8.5 13.0 10.8 1.9 244 chr3L 1639206 5` UTR metl - chr3L 1639328 intergenic metl -,Bgb + chr3L 1639450 intergenic metl -,Bgb + chr3L_22_1635001 chr3L_1635001 D17-c3 1470 chr3L 1684007 1684014 chr3L 1684105 1684117 6 99 14.0 9.5 11.8 0.5 110 chr3L 1684007 intron CG7991 + chr3L 1684062 intron CG7991 + chr3L 1684117 intron CG7991 + chr3L_6_1680001 chr3L_1680001 D17-c3 1471 chr3L 1684015 1684045 chr3L 1684098 1684148 15 98 4.5 7.0 5.8 2.2 133 chr3L 1684015 intron CG7991 + chr3L 1684082 intron CG7991 + chr3L 1684148 intron CG7991 + chr3L_15_1680001 chr3L_1680001 D17-c3 1472 chr3L 1688225 1688270 chr3L 1688379 1688424 5 154 14.5 11.5 13.0 0.4 199 chr3L 1688225 intron CG7991 + chr3L 1688324 intron CG7991 + chr3L 1688424 intron CG7991 + chr3L_5_1685001 chr3L_1685001 D17-c3 1473 chr3L 1740833 1740866 chr3L 1741101 1741134 pogo 7 268 14.0 8.0 11.0 0.6 301 chr3L 1740833 intron Gk + chr3L 1740984 intron Gk + chr3L 1741134 intron Gk + chr3L_7_1740001 chr3L_1740001 D17-c3 1474 chr3L 1746569 1746618 chr3L 1746692 1746743 18 122 32.5 31.5 32.0 0.5 174 chr3L 1746569 intergenic CG13921 + chr3L 1746656 intergenic CG13921 + chr3L 1746743 intergenic CG13921 + chr3L_18_1745001 chr3L_1745001 D17-c3 1475 chr3L 1805672 1805712 chr3L 1805871 1805911 19 199 27.0 16.5 21.8 0.8 239 chr3L 1805672 exon CG42676 + chr3L 1805792 intron CG42676 + chr3L 1805911 intron CG42676 + chr3L_19_1805001 chr3L_1805001 D17-c3 1476 chr3L 1848615 1848670 chr3L 1848718 1848773 39 102 3.5 9.0 6.2 5.4 158 chr3L 1848615 intergenic not near genes chr3L 1848694 intergenic not near genes chr3L 1848773 intergenic not near genes chr3L_39_1845001 chr3L_1845001 D17-c3 1477 chr3L 1882340 1882380 chr3L 1882461 1882500 6 120 15.5 18.5 17.0 0.3 160 chr3L 1882340 intron CG13937 - chr3L 1882420 intron CG13937 - chr3L 1882500 intron CG13937 - chr3L_6_1880001 chr3L_1880001 D17-c3 1478 chr3L 1922419 1922442 chr3L 1922524 1922547 9 102 12.5 17.0 14.8 0.6 128 chr3L 1922419 intron Dbx + chr3L 1922483 intron Dbx + chr3L 1922547 intron Dbx + chr3L_9_1920001 chr3L_1920001 D17-c3 1479 chr3L 1978702 1978750 chr3L 1978900 1978947 22 198 59.5 61.5 60.5 0.4 245 chr3L 1978702 intergenic not near genes chr3L 1978824 intergenic not near genes chr3L 1978947 intergenic not near genes chr3L_22_1975001 chr3L_1975001 D17-c3 1480 chr3L 2006443 2006502 chr3L 2006548 2006606 30 100 8.0 6.0 7.0 3.8 163 chr3L 2006443 intergenic not near genes chr3L 2006524 intergenic not near genes chr3L 2006606 intergenic not near genes chr3L_30_2005001 chr3L_2005001 D17-c3 1481 chr3L 2015751 2015756 chr3L 2015854 2015859 5 103 13.0 0.5 6.8 0.6 108 chr3L 2015751 intergenic not near genes chr3L 2015805 intergenic not near genes chr3L 2015859 intergenic not near genes chr3L_5_2015001 chr3L_2015001 D17-c3 1482 chr3L 2108231 2108276 chr3L 2113460 2113505 copia 9 5229 4.5 5.0 4.8 1.6 5274 chr3L 2108231 intron sls - chr3L 2110868 intron sls - chr3L 2113505 intron sls - chr3L_9_2110001 chr3L_2110001 D17-c3 1483 chr3L 2139181 2139234 chr3L 2139287 2139340 36 106 9.0 13.0 11.0 3.0 159 chr3L 2139181 intron zormin - chr3L 2139260 intron zormin - chr3L 2139340 intron zormin - chr3L_36_2135001 chr3L_2135001 D17-c3 1484 chr3L 2168754 2168798 chr3L 2168870 2168914 37 116 16.5 7.5 12.0 2.8 160 chr3L 2168754 exon CG15879 - chr3L 2168834 intron CG15879 - chr3L 2168914 intron CG15879 - chr3L_37_2165001 chr3L_2165001 D17-c3 1485 chr3L 2181155 2181201 chr3L 2181254 2181305 27 99 11.5 8.0 9.8 2.5 150 chr3L 2181155 intergenic not near genes chr3L 2181230 intergenic not near genes chr3L 2181305 intergenic not near genes chr3L_27_2180001 chr3L_2180001 D17-c3 1486 chr3L 2199785 2199821 chr3L 2199886 2199922 26 101 5.0 12.0 8.5 2.7 137 chr3L 2199785 intergenic not near genes chr3L 2199854 intergenic not near genes chr3L 2199922 intergenic not near genes chr3L_26_2195001 chr3L_2195001 D17-c3 1487 chr3L 2277953 2278011 chr3L 2278174 2278232 37 220 8.0 5.5 6.8 4.7 279 chr3L 2277953 3` UTR yellow-g2 + chr3L 2278092 intergenic yellow-g2 + chr3L 2278232 intergenic yellow-g2 + chr3L_37_2275001 chr3L_2275001 D17-c3 1488 chr3L 2307983 2308033 chr3L 2308114 2308164 19 130 8.5 7.5 8.0 2.1 181 chr3L 2307983 intergenic not near genes chr3L 2308074 intergenic not near genes chr3L 2308164 intergenic not near genes chr3L_19_2305001 chr3L_2305001 D17-c3 1489 chr3L 2310124 2310180 chr3L 2310892 2310948 33 767 12.0 3.0 7.5 3.9 824 chr3L 2310124 intergenic not near genes chr3L 2310536 intergenic not near genes chr3L 2310948 intergenic not near genes chr3L_33_2310001 chr3L_2310001 D17-c3 1490 chr3L 2316668 2316714 chr3L 2316775 2316823 15 109 9.5 8.5 9.0 1.5 155 chr3L 2316668 intergenic CR45427 - chr3L 2316746 intergenic CR45427 - chr3L 2316823 intergenic CR45427 - chr3L_15_2315001 chr3L_2315001 D17-c3 1491 chr3L 2331558 2331613 chr3L 2331660 2331715 25 101 12.5 12.5 12.5 1.9 157 chr3L 2331558 intron MsR1 + chr3L 2331636 intron MsR1 + chr3L 2331715 intron MsR1 + chr3L_25_2330001 chr3L_2330001 D17-c3 1492 chr3L 2355424 2355455 chr3L 2355637 2355668 6 210 8.0 0.0 4.0 1.2 244 chr3L 2355424 intergenic not near genes chr3L 2355546 intergenic not near genes chr3L 2355668 intergenic not near genes chr3L_6_2355001 chr3L_2355001 D17-c3 1493 chr3L 2355456 2355465 chr3L 2355634 2355666 4 201 5.5 0.0 2.8 1.1 210 chr3L 2355456 intergenic not near genes chr3L 2355561 intergenic not near genes chr3L 2355666 intergenic not near genes chr3L_4_2355001 chr3L_2355001 D17-c3 1494 chr3L 2356042 2356096 chr3L 2356155 2356156 15 109 12.0 5.0 8.5 1.6 114 chr3L 2356042 intergenic not near genes chr3L 2356099 intergenic not near genes chr3L 2356156 intergenic not near genes chr3L_15_2355001 chr3L_2355001 D17-c3 1495 chr3L 2411313 2411343 chr3L 2411418 2411448 15 104 6.5 10.0 8.2 1.6 135 chr3L 2411313 intron CG45186 + chr3L 2411380 intron CG45186 + chr3L 2411448 intron CG45186 + chr3L_15_2410001 chr3L_2410001 D17-c3 1496 chr3L 2429036 2429076 chr3L 2429154 2429184 27 117 7.5 6.5 7.0 3.4 148 chr3L 2429036 intron CG45186 + chr3L 2429110 intron CG45186 + chr3L 2429184 intron CG45186 + chr3L_27_2425001 chr3L_2425001 D17-c3 1497 chr3L 2433469 2433526 chr3L 2433577 2433634 25 105 8.5 9.0 8.8 2.6 165 chr3L 2433469 intron CG45186 + chr3L 2433552 intron CG45186 + chr3L 2433634 intron CG45186 + chr3L_25_2430001 chr3L_2430001 D17-c3 1498 chr3L 2447480 2447534 chr3L 2456661 2456700 roo 36 9180 7.0 10.0 8.5 3.8 9220 chr3L 2447480 intron CG45186 + chr3L 2452090 intron CG45186 + chr3L 2456700 intron CG45186 + chr3L_36_2450001 chr3L_2450001 D17-c3 1499 chr3L 2467426 2467487 chr3L 2467548 2467609 9 122 4.5 4.0 4.2 1.7 183 chr3L 2467426 intron CG45186 + chr3L 2467518 intron CG45186 + chr3L 2467609 intron CG45186 + chr3L_9_2465001 chr3L_2465001 D17-c3 1500 chr3L 2515417 2515430 chr3L 2515524 2515537 4 107 4.0 26.0 15.0 0.2 120 chr3L 2515417 intron Spn - chr3L 2515477 intron Spn - chr3L 2515537 intron Spn - chr3L_4_2515001 chr3L_2515001 D17-c3 1501 chr3L 2520625 2520678 chr3L 2520746 2520799 19 121 5.5 8.0 6.8 2.4 174 chr3L 2520625 intron Spn - chr3L 2520712 intron Spn - chr3L 2520799 intron Spn - chr3L_19_2520001 chr3L_2520001 D17-c3 1502 chr3L 2533641 2533675 chr3L 2533738 2533750 17 102 19.5 38.0 28.8 0.6 109 chr3L 2533641 intron Spn - chr3L 2533696 intron Spn - chr3L 2533750 intron Spn - chr3L_17_2530001 chr3L_2530001 D17-c3 1503 chr3L 2548230 2548284 chr3L 2548344 2548397 31 113 10.0 13.0 11.5 2.5 167 chr3L 2548230 intron Spn - chr3L 2548314 intron Spn - chr3L 2548397 intron Spn - chr3L_31_2545001 chr3L_2545001 D17-c3 1504 chr3L 2551743 2551796 chr3L 2553567 2553620 22 1825 44.0 72.5 58.2 0.4 1877 chr3L 2551743 intron Spn - chr3L 2552682 intron Spn - chr3L 2553620 intron Spn - chr3L_22_2550001 chr3L_2550001 D17-c3 1505 chr3L 2561513 2561557 chr3L 2561615 2561659 17 102 10.5 7.5 9.0 1.7 146 chr3L 2561513 intron msn - chr3L 2561586 intron msn - chr3L 2561659 intron msn - chr3L_17_2560001 chr3L_2560001 D17-c3 1506 chr3L 2626061 2626093 chr3L 2626187 2626219 14 125 17.5 10.5 14.0 0.9 158 chr3L 2626061 intron Pxn - chr3L 2626140 intron Pxn - chr3L 2626219 intron Pxn - chr3L_14_2625001 chr3L_2625001 D17-c3 1507 chr3L 2795700 2795741 chr3L 2795848 2795879 6 146 16.0 20.0 18.0 0.3 179 chr3L 2795700 intron CG43444 - chr3L 2795790 intron CG43444 - chr3L 2795879 intron CG43444 - chr3L_6_2795001 chr3L_2795001 D17-c3 1508 chr3L 2835863 2835865 chr3L 2835968 2835970 5 105 28.0 28.5 28.2 0.2 107 chr3L 2835863 intron CG43444 - chr3L 2835916 intron CG43444 - chr3L 2835970 intron CG43444 - chr3L_5_2835001 chr3L_2835001 D17-c3 1509 chr3L 2882092 2882138 chr3L 2882193 2882239 13 101 17.5 14.0 15.8 0.8 147 chr3L 2882092 intergenic not near genes chr3L 2882166 intergenic not near genes chr3L 2882239 intergenic not near genes chr3L_13_2880001 chr3L_2880001 D17-c3 1510 chr3L 2927820 2927867 chr3L 2936122 2936169 Tirant 13 8302 5.0 3.5 4.2 2.5 8349 chr3L 2927820 intron Shab + chr3L 2931994 intron Shab + chr3L 2936169 intron Shab + chr3L_13_2930001 chr3L_2930001 D17-c3 1511 chr3L 2987706 2987756 chr3L 2987992 2988043 16 287 25.0 21.5 23.2 0.7 337 chr3L 2987706 intergenic not near genes chr3L 2987874 intergenic not near genes chr3L 2988043 intergenic not near genes chr3L_16_2985001 chr3L_2985001 D17-c3 1512 chr3L 3061260 3061314 chr3L 3069868 3069922 Tirant 39 8607 13.0 12.0 12.5 2.9 8662 chr3L 3061260 intron CG32486 - chr3L 3065591 intron CG32486 - chr3L 3069922 intron CG32486 - chr3L_39_3065001 chr3L_3065001 D17-c3 1513 chr3L 3165325 3165382 chr3L 3165433 3165490 19 108 31.5 35.5 33.5 0.6 165 chr3L 3165325 intron,intron Asciz -,CG32280 + chr3L 3165408 intron,intron Asciz -,CG32280 + chr3L 3165490 intron,intron Asciz -,CG32280 + chr3L_19_3165001 chr3L_3165001 D17-c3 1514 chr3L 3178704 3178744 chr3L 3178812 3178852 13 108 35.5 32.0 33.8 0.4 148 chr3L 3178704 intergenic CG14964 -,Girdin + chr3L 3178778 intergenic Girdin +,CG14964 - chr3L 3178852 intergenic Girdin +,CG14964 - chr3L_13_3175001 chr3L_3175001 D17-c3 1515 chr3L 3247604 3247612 chr3L 3247711 3247719 6 107 16.0 10.5 13.2 0.4 115 chr3L 3247604 intergenic CG43389 + chr3L 3247662 intergenic CG43389 + chr3L 3247719 intergenic CG43389 + chr3L_6_3245001 chr3L_3245001 D17-c3 1516 chr3L 3252317 3252374 chr3L 3252418 3252475 13 101 2.5 2.5 2.5 3.7 158 chr3L 3252317 5` UTR CR43626 + chr3L 3252396 5` UTR CR43626 + chr3L 3252475 5` UTR CR43626 + chr3L_13_3250001 chr3L_3250001 D17-c3 1517 chr3L 3259820 3259833 chr3L 3259945 3259958 12 125 6.5 19.0 12.8 0.9 138 chr3L 3259820 intron ckd + chr3L 3259889 intron ckd + chr3L 3259958 intron ckd + chr3L_12_3255001 chr3L_3255001 D17-c3 1518 chr3L 3281417 3281469 chr3L 3281938 3281990 Doc 50 520 18.5 18.0 18.2 2.6 573 chr3L 3281417 intron CG12017 + chr3L 3281704 intron CG12017 + chr3L 3281990 intron CG12017 + chr3L_50_3280001 chr3L_3280001 D17-c3 1519 chr3L 3294112 3294120 chr3L 3294228 3294236 10 116 20.5 10.5 15.5 0.6 124 chr3L 3294112 intron CG12009 + chr3L 3294174 intron CG12009 + chr3L 3294236 intron CG12009 + chr3L_10_3290001 chr3L_3290001 D17-c3 1520 chr3L 3294122 3294148 chr3L 3294227 3294264 8 115 11.0 10.5 10.8 0.7 142 chr3L 3294122 intron CG12009 + chr3L 3294193 intron CG12009 + chr3L 3294264 intron CG12009 + chr3L_8_3290001 chr3L_3290001 D17-c3 1521 chr3L 3317508 3317562 chr3L 3317612 3317666 26 103 1.5 11.0 6.2 3.6 158 chr3L 3317508 intergenic Drsl5 + chr3L 3317587 intergenic PIG-C -,Drsl5 + chr3L 3317666 intergenic PIG-C - chr3L_26_3315001 chr3L_3315001 D17-c3 1522 chr3L 3381005 3381053 chr3L 3381123 3381171 16 118 5.0 11.5 8.2 1.7 166 chr3L 3381005 intergenic not near genes chr3L 3381088 intergenic not near genes chr3L 3381171 intergenic not near genes chr3L_16_3380001 chr3L_3380001 D17-c3 1523 chr3L 3246527 3246539 chr3L 3427521 3427540 4 180996 43.5 46.0 44.8 0.1 181013 chr3L 3246527 intergenic not near genes chr3L 3337034 intron kst + chr3L 3427540 intergenic not near genes chr3L_4_3335001 chr3L_3335001 D17-c3 1524 chr3L 3436263 3436315 chr3L 3436367 3436419 33 104 8.0 6.0 7.0 4.1 156 chr3L 3436263 intron eIF5B - chr3L 3436341 intron eIF5B - chr3L 3436419 intron eIF5B - chr3L_33_3435001 chr3L_3435001 D17-c3 1525 chr3L 3450578 3450611 chr3L 3450688 3450721 21 110 7.5 6.0 6.8 2.7 143 chr3L 3450578 intron eIF5B - chr3L 3450650 intron eIF5B - chr3L 3450721 intron eIF5B - chr3L_21_3450001 chr3L_3450001 D17-c3 1526 chr3L 3470131 3470189 chr3L 3470232 3470290 26 99 1.5 8.0 4.8 4.5 159 chr3L 3470131 intron CG14971 - chr3L 3470210 intron CG14971 - chr3L 3470290 intron CG14971 - chr3L_26_3470001 chr3L_3470001 D17-c3 1527 chr3L 3475050 3475111 chr3L 3475520 3475544 jockey 20 466 6.0 14.5 10.2 1.8 494 chr3L 3475050 intron CG42324 + chr3L 3475297 intron CG42324 + chr3L 3475544 intron CG42324 + chr3L_20_3475001 chr3L_3475001 D17-c3 1528 chr3L 3481764 3481794 chr3L 7813373 7813403 4 4331609 24.5 16.0 20.2 0.2 4331639 chr3L 3481764 intron CG42324 + chr3L 5647584 exon Blimp-1 + chr3L 7813403 intergenic not near genes chr3L_4_5645001 chr3L_5645001 D17-c3 1529 chr3L 3484388 3484447 chr3L 3484490 3484549 36 102 6.0 5.5 5.8 5.3 161 chr3L 3484388 intron,intron CG42324 +,CG43074 - chr3L 3484468 intron,exon CG42324 +,CG43074 - chr3L 3484549 intron,intron CG42324 +,CG43074 - chr3L_36_3480001 chr3L_3480001 D17-c3 1530 chr3L 3491607 3491657 chr3L 3491711 3491766 31 108 9.5 2.5 6.0 4.4 159 chr3L 3491607 intron CG42324 + chr3L 3491686 intron CG42324 + chr3L 3491766 intron CG42324 + chr3L_31_3490001 chr3L_3490001 D17-c3 1531 chr3L 3494172 3494204 chr3L 3494274 3494306 27 102 0.0 9.0 4.5 4.9 134 chr3L 3494172 intron CG42324 + chr3L 3494239 intron CG42324 + chr3L 3494306 intron CG42324 + chr3L_27_3490001 chr3L_3490001 D17-c3 1532 chr3L 3509389 3509440 chr3L 3509519 3509570 6 130 20.5 21.5 21.0 0.3 181 chr3L 3509389 3` UTR CG42324 + chr3L 3509480 3` UTR CG42324 + chr3L 3509570 3` UTR CG42324 + chr3L_6_3505001 chr3L_3505001 D17-c3 1533 chr3L 3530679 3530733 chr3L 3530782 3530836 8 103 5.0 5.5 5.2 1.3 157 chr3L 3530679 intron Eip63E + chr3L 3530758 intron Eip63E + chr3L 3530836 intron Eip63E + chr3L_8_3530001 chr3L_3530001 D17-c3 1534 chr3L 3547039 3547087 chr3L 3547144 3547200 20 106 2.5 7.0 4.8 3.4 161 chr3L 3547039 intron Eip63E + chr3L 3547120 intron Eip63E + chr3L 3547200 intron Eip63E + chr3L_20_3545001 chr3L_3545001 D17-c3 1535 chr3L 3555866 3555895 chr3L 3555973 3556002 23 107 9.5 12.0 10.8 1.9 136 chr3L 3555866 intron Eip63E + chr3L 3555934 intron Eip63E + chr3L 3556002 intron Eip63E + chr3L_23_3555001 chr3L_3555001 D17-c3 1536 chr3L 3565915 3565969 chr3L 3566016 3566070 40 100 6.5 6.5 6.5 5.3 155 chr3L 3565915 intron Eip63E + chr3L 3565992 intron Eip63E + chr3L 3566070 intron Eip63E + chr3L_40_3565001 chr3L_3565001 D17-c3 1537 chr3L 3601276 3601331 chr3L 3606612 3606660 copia 35 5335 4.0 3.0 3.5 7.8 5384 chr3L 3601276 intron Eip63E + chr3L 3603968 intron Eip63E + chr3L 3606660 intron Eip63E + chr3L_35_3600001 chr3L_3600001 D17-c3 1538 chr3L 3627212 3627257 chr3L 3627342 3627387 21 130 7.5 5.5 6.5 2.8 175 chr3L 3627212 intron dar1 + chr3L 3627300 intron dar1 + chr3L 3627387 intron dar1 + chr3L_21_3625001 chr3L_3625001 D17-c3 1539 chr3L 3661869 3661897 chr3L 3661977 3662005 8 108 0.0 9.5 4.8 1.4 136 chr3L 3661869 intergenic not near genes chr3L 3661937 intergenic not near genes chr3L 3662005 intergenic not near genes chr3L_8_3660001 chr3L_3660001 D17-c3 1540 chr3L 3709447 3709455 chr3L 3709554 3709562 11 107 4.5 14.5 9.5 1.0 115 chr3L 3709447 intergenic CR45675 + chr3L 3709504 intergenic not near genes chr3L 3709562 intergenic not near genes chr3L_11_3705001 chr3L_3705001 D17-c3 1541 chr3L 3722403 3722435 chr3L 3732014 3732059 14 9624 57.5 25.5 41.5 0.3 9656 chr3L 3722403 exon CG32264 - chr3L 3727231 intron CG32264 - chr3L 3732059 intron CG32264 - chr3L_14_3725001 chr3L_3725001 D17-c3 1542 chr3L 3481824 3481875 chr3L 3732402 3732454 9 250578 28.0 32.5 30.2 0.3 250630 chr3L 3481824 intron CG42324 + chr3L 3607139 intron Eip63E + chr3L 3732454 intron CG32264 - chr3L_9_3605001 chr3L_3605001 D17-c3 1543 chr3L 3518828 3518870 chr3L 3732554 3732596 9 213726 32.0 19.0 25.5 0.3 213768 chr3L 3518828 intron Eip63E + chr3L 3625712 intergenic not near genes chr3L 3732596 intron CG32264 - chr3L_9_3625001 chr3L_3625001 D17-c3 1544 chr3L 3753239 3753288 chr3L 3753357 3753406 29 118 5.5 11.5 8.5 3.1 167 chr3L 3753239 intron CG32264 - chr3L 3753322 intron CG32264 - chr3L 3753406 intron CG32264 - chr3L_29_3750001 chr3L_3750001 D17-c3 1545 chr3L 3763734 3763750 chr3L 3763839 3763844 7 103 18.0 0.0 9.0 0.7 110 chr3L 3763734 intron CG32264 - chr3L 3763789 intron CG32264 - chr3L 3763844 intron CG32264 - chr3L_7_3760001 chr3L_3760001 D17-c3 1546 chr3L 3766712 3766741 chr3L 3766823 3766852 11 111 5.0 3.5 4.2 2.1 140 chr3L 3766712 intron CG32264 - chr3L 3766782 intron CG32264 - chr3L 3766852 intron CG32264 - chr3L_11_3765001 chr3L_3765001 D17-c3 1547 chr3L 3783248 3783289 chr3L 3783349 3783390 9 101 1.5 4.0 2.8 2.4 142 chr3L 3783248 intron CG32264 - chr3L 3783319 intron CG32264 - chr3L 3783390 intron CG32264 - chr3L_9_3780001 chr3L_3780001 D17-c3 1548 chr3L 3793011 3793049 chr3L 3793239 3793277 18 228 4.5 9.5 7.0 2.2 266 chr3L 3793011 intron CG32264 - chr3L 3793144 intron CG32264 - chr3L 3793277 intron CG32264 - chr3L_18_3790001 chr3L_3790001 D17-c3 1549 chr3L 3795576 3795621 chr3L 3795678 3795723 17 101 5.5 9.5 7.5 2.0 147 chr3L 3795576 intron CG32264 - chr3L 3795650 intron CG32264 - chr3L 3795723 intron CG32264 - chr3L_17_3795001 chr3L_3795001 D17-c3 1550 chr3L 3797226 3797264 chr3L 3797334 3797371 10 108 0.5 8.5 4.5 1.8 145 chr3L 3797226 intron CG32264 - chr3L 3797298 intron CG32264 - chr3L 3797371 intron CG32264 - chr3L_10_3795001 chr3L_3795001 D17-c3 1551 chr3L 3833715 3833770 chr3L 3833981 3834036 pogo 14 266 3.5 3.0 3.2 3.3 321 chr3L 3833715 intron enc + chr3L 3833876 intron enc + chr3L 3834036 intron enc + chr3L_14_3830001 chr3L_3830001 D17-c3 1552 chr3L 3845451 3845500 chr3L 3845558 3845607 24 106 5.5 11.0 8.2 2.6 156 chr3L 3845451 intergenic not near genes chr3L 3845529 intergenic not near genes chr3L 3845607 intergenic not near genes chr3L_24_3845001 chr3L_3845001 D17-c3 1553 chr3L 4015712 4015754 chr3L 4015820 4015862 14 108 7.5 6.0 6.8 1.8 150 chr3L 4015712 intergenic not near genes chr3L 4015787 intergenic not near genes chr3L 4015862 intergenic not near genes chr3L_14_4015001 chr3L_4015001 D17-c3 1554 chr3L 4146803 4146839 chr3L 4146910 4146946 15 107 0.5 15.0 7.8 1.7 143 chr3L 4146803 intergenic not near genes chr3L 4146874 intergenic not near genes chr3L 4146946 intergenic not near genes chr3L_15_4145001 chr3L_4145001 D17-c3 1555 chr3L 4222526 4222550 chr3L 5366817 5366841 4 1144291 52.0 45.5 48.8 0.1 1144315 chr3L 4222526 exon,3` UTR CG43367 +,CR32252 - chr3L 4794684 intron RhoGEF64C + chr3L 5366841 exon Membrin + chr3L_4_4790001 chr3L_4790001 D17-c3 1556 chr3L 4229712 4229766 chr3L 4229827 4229871 25 109 15.5 13.5 14.5 1.6 159 chr3L 4229712 intron ImpL2 - chr3L 4229792 intron ImpL2 - chr3L 4229871 intron ImpL2 - chr3L_25_4225001 chr3L_4225001 D17-c3 1557 chr3L 4328729 4328753 chr3L 4336252 4336276 412 8 7523 7.5 9.5 8.5 0.8 7547 chr3L 4328729 intron Cip4 - chr3L 4332502 intron Cip4 - chr3L 4336276 exon Cip4 - chr3L_8_4330001 chr3L_4330001 D17-c3 1558 chr3L 4351792 4351846 chr3L 4351894 4351946 18 103 13.0 3.0 8.0 2.0 154 chr3L 4351792 intron Cip4 - chr3L 4351869 intron Cip4 - chr3L 4351946 intron Cip4 - chr3L_18_4350001 chr3L_4350001 D17-c3 1559 chr3L 4361021 4361025 chr3L 4362902 4362906 4 1881 0.0 8.0 4.0 0.8 1885 chr3L 4361021 intron Cip4 - chr3L 4361964 intron Cip4 - chr3L 4362906 intron Cip4 - chr3L_4_4360001 chr3L_4360001 D17-c3 1560 chr3L 4364203 4364231 chr3L 4364317 4364345 8 114 2.5 9.5 6.0 1.1 142 chr3L 4364203 intergenic Cip4 -,mRpS6 + chr3L 4364274 intergenic Cip4 -,mRpS6 + chr3L 4364345 intergenic mRpS6 +,Cip4 - chr3L_8_4360001 chr3L_4360001 D17-c3 1561 chr3L 4676012 4676054 chr3L 4676118 4676160 14 106 3.0 5.5 4.2 2.7 148 chr3L 4676012 intron axo - chr3L 4676086 intron axo - chr3L 4676160 intron axo - chr3L_14_4675001 chr3L_4675001 D17-c3 1562 chr3L 4797936 4797991 chr3L 4798041 4798096 42 103 0.0 14.5 7.2 5.1 160 chr3L 4797936 intergenic not near genes chr3L 4798016 intergenic not near genes chr3L 4798096 intergenic not near genes chr3L_42_4795001 chr3L_4795001 D17-c3 1563 chr3L 4837865 4837925 chr3L 4837969 4838014 26 101 6.5 7.0 6.8 3.3 149 chr3L 4837865 3` UTR CG13707 - chr3L 4837940 3` UTR CG13707 - chr3L 4838014 3` UTR CG13707 - chr3L_26_4835001 chr3L_4835001 D17-c3 1564 chr3L 4842747 4842761 chr3L 24763633 24763633 4 19920882 24.5 28.0 26.2 0.1 19920886 chr3L 4842747 intergenic not near genes chr3L 14803190 intron gnu - chr3L 24763633 intron scro + chr3L_4_14800001 chr3L_14800001 D17-c3 1565 chr3L 4858282 4858334 chr3L 4858397 4858449 35 114 14.5 19.5 17.0 1.9 167 chr3L 4858282 intergenic not near genes chr3L 4858366 intergenic not near genes chr3L 4858449 intergenic not near genes chr3L_35_4855001 chr3L_4855001 D17-c3 1566 chr3L 4862698 4862743 chr3L 5000963 5001008 6 138265 17.5 14.5 16.0 0.4 138310 chr3L 4862698 intron CG17150 + chr3L 4931853 intergenic not near genes chr3L 5001008 intron Con - chr3L_6_4930001 chr3L_4930001 D17-c3 1567 chr3L 4864447 4864469 chr3L 4864708 4864730 10 261 13.0 10.0 11.5 0.8 283 chr3L 4864447 intron CG17150 + chr3L 4864588 intron CG17150 + chr3L 4864730 intron CG17150 + chr3L_10_4860001 chr3L_4860001 D17-c3 1568 chr3L 4883720 4883741 chr3L 7382853 7382874 6 2499133 21.0 39.5 30.2 0.2 2499154 chr3L 4883720 exon CG17150 + chr3L 6133297 exon Lcp65Ag2 - chr3L 7382874 intron smid + chr3L_6_6130001 chr3L_6130001 D17-c3 1569 chr3L 4901109 4901160 chr3L 4907324 4907375 diver 9 6215 3.0 4.0 3.5 2.0 6266 chr3L 4901109 intergenic CG13704 + chr3L 4904242 intergenic not near genes chr3L 4907375 intergenic not near genes chr3L_9_4900001 chr3L_4900001 D17-c3 1570 chr3L 5034133 5034171 chr3L 5043310 5043348 roo 7 9177 5.0 1.0 3.0 1.8 9215 chr3L 5034133 intron Con - chr3L 5038740 intron Con - chr3L 5043348 intron Con - chr3L_7_5035001 chr3L_5035001 D17-c3 1571 chr3L 5045432 5045477 chr3L 5050238 5050283 Doc 13 4806 10.0 5.5 7.8 1.5 4851 chr3L 5045432 intron Con - chr3L 5047858 intron Con - chr3L 5050283 intron Con - chr3L_13_5045001 chr3L_5045001 D17-c3 1572 chr3L 5054917 5054972 chr3L 5055022 5055077 23 103 6.0 12.5 9.2 2.3 160 chr3L 5054917 intron Con - chr3L 5054997 intron Con - chr3L 5055077 intron Con - chr3L_23_5050001 chr3L_5050001 D17-c3 1573 chr3L 5081834 5081880 chr3L 5081937 5081984 24 103 5.5 7.5 6.5 3.2 150 chr3L 5081834 intergenic not near genes chr3L 5081909 intergenic not near genes chr3L 5081984 intergenic not near genes chr3L_24_5080001 chr3L_5080001 D17-c3 1574 chr3L 5103590 5103599 chr3L 5103695 5103704 4 105 9.0 0.0 4.5 0.7 114 chr3L 5103590 intergenic not near genes chr3L 5103647 intergenic not near genes chr3L 5103704 intergenic not near genes chr3L_4_5100001 chr3L_5100001 D17-c3 1575 chr3L 5104457 5104510 chr3L 5124616 5124669 18 20159 4.0 6.0 5.0 3.0 20212 chr3L 5104457 intergenic not near genes chr3L 5114563 intergenic not near genes chr3L 5124669 intergenic not near genes chr3L_18_5110001 chr3L_5110001 D17-c3 1576 chr3L 5164614 5164670 chr3L 5164715 5164771 22 101 6.0 3.0 4.5 4.0 157 chr3L 5164614 intron shep - chr3L 5164692 intron shep - chr3L 5164771 intron shep - chr3L_22_5160001 chr3L_5160001 D17-c3 1577 chr3L 5177642 5177683 chr3L 5177764 5177805 17 122 8.0 6.0 7.0 2.1 163 chr3L 5177642 intron shep - chr3L 5177724 intron shep - chr3L 5177805 intron shep - chr3L_17_5175001 chr3L_5175001 D17-c3 1578 chr3L 5485232 5485280 chr3L 5485564 5485612 13 332 3.5 4.5 4.0 2.6 380 chr3L 5485232 intergenic not near genes chr3L 5485422 intergenic not near genes chr3L 5485612 intergenic not near genes chr3L_13_5485001 chr3L_5485001 D17-c3 1579 chr3L 5498385 5498428 chr3L 5498483 5498530 4 101 0.5 5.0 2.8 1.1 145 chr3L 5498385 exon blanks - chr3L 5498458 exon blanks - chr3L 5498530 exon blanks - chr3L_4_5495001 chr3L_5495001 D17-c3 1580 chr3L 5527605 5527644 chr3L 5527732 5527781 21 128 33.5 38.5 36.0 0.6 176 chr3L 5527605 intron Lkr - chr3L 5527693 intron Lkr - chr3L 5527781 intron Lkr - chr3L_21_5525001 chr3L_5525001 D17-c3 1581 chr3L 5537695 5537734 chr3L 5538062 5538101 jockey 9 367 7.5 5.5 6.5 1.2 406 chr3L 5537695 intergenic not near genes chr3L 5537898 intergenic not near genes chr3L 5538101 intergenic CG10625 - chr3L_9_5535001 chr3L_5535001 D17-c3 1582 chr3L 5581466 5581489 chr3L 5581554 5581600 5 106 16.5 8.0 12.2 0.4 134 chr3L 5581466 intergenic not near genes chr3L 5581533 intergenic not near genes chr3L 5581600 intergenic not near genes chr3L_5_5580001 chr3L_5580001 D17-c3 1583 chr3L 5677167 5677206 chr3L 5677268 5677307 8 101 2.0 15.5 8.8 0.8 140 chr3L 5677167 intron sif + chr3L 5677237 intron sif + chr3L 5677307 intron sif + chr3L_8_5675001 chr3L_5675001 D17-c3 1584 chr3L 5849249 5849295 chr3L 5849349 5849405 21 109 6.0 7.5 6.8 2.7 156 chr3L 5849249 intergenic not near genes chr3L 5849327 intergenic not near genes chr3L 5849405 intergenic not near genes chr3L_21_5845001 chr3L_5845001 D17-c3 1585 chr3L 5910011 5910034 chr3L 5910277 5910300 pogo 15 266 14.0 0.0 7.0 1.9 289 chr3L 5910011 intron CG13288 + chr3L 5910156 intron CG13288 + chr3L 5910300 intron CG13288 + chr3L_15_5910001 chr3L_5910001 D17-c3 1586 chr3L 5910358 5910411 chr3L 5910819 5910872 46 460 4.0 7.0 5.5 7.1 514 chr3L 5910358 intron CG13288 + chr3L 5910615 intron CG13288 + chr3L 5910872 intron CG13288 + chr3L_46_5910001 chr3L_5910001 D17-c3 1587 chr3L 5909517 5909539 chr3L 5912884 5912942 32 3375 64.5 49.5 57.0 0.6 3425 chr3L 5909517 exon CG13288 + chr3L 5911230 intron CG13288 + chr3L 5912942 intron CG13288 + chr3L_32_5910001 chr3L_5910001 D17-c3 1588 chr3L 5926296 5926346 chr3L 5926511 5926538 BS 22 213 5.5 9.5 7.5 2.6 242 chr3L 5926296 intron Vap-33B + chr3L 5926417 intron Vap-33B + chr3L 5926538 intron Vap-33B + chr3L_22_5925001 chr3L_5925001 D17-c3 1589 chr3L 5937192 5937244 chr3L 5937324 5937376 23 130 8.5 7.0 7.8 2.6 184 chr3L 5937192 intron CG33993 - chr3L 5937284 intron CG33993 - chr3L 5937376 intron CG33993 - chr3L_23_5935001 chr3L_5935001 D17-c3 1590 chr3L 5983807 5983866 chr3L 5983953 5984012 16 145 8.0 0.0 4.0 3.2 205 chr3L 5983807 3` UTR CR45439 - chr3L 5983910 intergenic CR45439 -,CR45440 - chr3L 5984012 intergenic CR45440 -,CR45439 - chr3L_16_5980001 chr3L_5980001 D17-c3 1591 chr3L 6001662 6001665 chr3L 6004387 6004390 jockey 4 2725 14.5 2.0 8.2 0.4 2728 chr3L 6001662 intron PVRAP + chr3L 6003026 intron PVRAP + chr3L 6004390 intron PVRAP + chr3L_4_6000001 chr3L_6000001 D17-c3 1592 chr3L 6001683 6001712 chr3L 6004377 6004437 jockey 13 2721 6.0 2.0 4.0 2.6 2754 chr3L 6001683 intron PVRAP + chr3L 6003060 intron PVRAP + chr3L 6004437 intron PVRAP + chr3L_13_6000001 chr3L_6000001 D17-c3 1593 chr3L 6040256 6040286 chr3L 6040351 6040391 11 103 4.0 1.0 2.5 3.1 135 chr3L 6040256 intergenic Jon65Aiv + chr3L 6040324 intergenic Jon65Aiv + chr3L 6040391 intergenic Jon65Aiv + chr3L_11_6040001 chr3L_6040001 D17-c3 1594 chr3L 6040351 6040394 chr3L 6042732 6042775 Doc 13 2381 1.0 4.0 2.5 3.7 2424 chr3L 6040351 intergenic Jon65Aiv + chr3L 6041563 intergenic not near genes chr3L 6042775 intergenic not near genes chr3L_13_6040001 chr3L_6040001 D17-c3 1595 chr3L 6052127 6052138 chr3L 6052238 6052249 4 111 0.5 7.5 4.0 0.8 122 chr3L 6052127 intergenic Jon65Aii +,Jon65Aiii + chr3L 6052188 intergenic Jon65Aii +,Jon65Aiii + chr3L 6052249 intergenic Jon65Aii + chr3L_4_6050001 chr3L_6050001 D17-c3 1596 chr3L 6052636 6052643 chr3L 6052746 6052753 5 110 35.5 32.0 33.8 0.1 117 chr3L 6052636 exon Jon65Aii + chr3L 6052694 intron Jon65Aii + chr3L 6052753 exon Jon65Aii + chr3L_5_6050001 chr3L_6050001 D17-c3 1597 chr3L 6052644 6052656 chr3L 6052739 6052766 20 104 28.5 30.0 29.2 0.7 122 chr3L 6052644 exon Jon65Aii + chr3L 6052705 intron Jon65Aii + chr3L 6052766 exon Jon65Aii + chr3L_20_6050001 chr3L_6050001 D17-c3 1598 chr3L 6052659 6052662 chr3L 6052749 6052772 9 108 26.0 33.5 29.8 0.3 113 chr3L 6052659 exon Jon65Aii + chr3L 6052716 intron Jon65Aii + chr3L 6052772 exon Jon65Aii + chr3L_9_6050001 chr3L_6050001 D17-c3 1599 chr3L 6064992 6065039 chr3L 6065094 6065141 7 102 5.0 1.5 3.2 1.7 149 chr3L 6064992 intergenic not near genes chr3L 6065066 intergenic not near genes chr3L 6065141 intergenic not near genes chr3L_7_6065001 chr3L_6065001 D17-c3 1600 chr3L 6119127 6119163 chr3L 6119241 6119277 10 114 6.0 7.0 6.5 1.3 150 chr3L 6119127 exon Ets65A + chr3L 6119202 intron Ets65A + chr3L 6119277 intron Ets65A + chr3L_10_6115001 chr3L_6115001 D17-c3 1601 chr3L 6155671 6155713 chr3L 6155782 6155824 9 111 4.5 3.5 4.0 1.8 153 chr3L 6155671 intergenic CR45421 - chr3L 6155748 intergenic not near genes chr3L 6155824 intergenic not near genes chr3L_9_6155001 chr3L_6155001 D17-c3 1602 chr3L 6220889 6220945 chr3L 6230066 6230122 roo 21 9177 9.0 5.5 7.2 2.6 9233 chr3L 6220889 5` UTR pncr008:3L + chr3L 6225506 intergenic not near genes chr3L 6230122 intergenic not near genes chr3L_21_6225001 chr3L_6225001 D17-c3 1603 chr3L 6250307 6250332 chr3L 6251612 6251637 4 1305 26.0 33.0 29.5 0.1 1330 chr3L 6250307 intron Best2 - chr3L 6250972 intron Best2 - chr3L 6251637 exon Best2 - chr3L_4_6250001 chr3L_6250001 D17-c3 1604 chr3L 6308457 6308498 chr3L 6308797 6308838 16 339 8.0 9.0 8.5 1.7 381 chr3L 6308457 intergenic not near genes chr3L 6308648 intergenic not near genes chr3L 6308838 intergenic not near genes chr3L_16_6305001 chr3L_6305001 D17-c3 1605 chr3L 6334984 6335041 chr3L 6335480 6335537 297 24 496 6.0 7.5 6.8 3.1 553 chr3L 6334984 intron CG13300 - chr3L 6335260 intron CG13300 - chr3L 6335537 intron CG13300 - chr3L_24_6335001 chr3L_6335001 D17-c3 1606 chr3L 6353350 6353398 chr3L 6353455 6353503 21 104 10.5 10.0 10.2 1.9 153 chr3L 6353350 intergenic not near genes chr3L 6353426 intergenic not near genes chr3L 6353503 intergenic not near genes chr3L_21_6350001 chr3L_6350001 D17-c3 1607 chr3L 6405644 6405680 chr3L 6432133 6432169 roo 12 26489 8.0 4.5 6.2 1.7 26525 chr3L 6405644 intron CG42747 + chr3L 6418906 intron CG42747 + chr3L 6432169 intron CG42747 + chr3L_12_6415001 chr3L_6415001 D17-c3 1608 chr3L 6503390 6503433 chr3L 6503508 6503551 4 118 6.5 2.5 4.5 0.7 161 chr3L 6503390 intron sfl + chr3L 6503470 intron sfl + chr3L 6503551 intron sfl + chr3L_4_6500001 chr3L_6500001 D17-c3 1609 chr3L 6573633 6573688 chr3L 6573761 6573816 37 125 11.0 7.5 9.2 3.6 183 chr3L 6573633 intron,intron CG18769 +,jv - chr3L 6573724 intron,intron CG18769 +,jv - chr3L 6573816 intron,intron CG18769 +,jv - chr3L_37_6570001 chr3L_6570001 D17-c3 1610 chr3L 6620587 6620606 chr3L 6621052 6621061 Rt1c 14 464 8.0 20.5 14.2 0.9 474 chr3L 6620587 intergenic not near genes chr3L 6620824 intergenic not near genes chr3L 6621061 intergenic not near genes chr3L_14_6620001 chr3L_6620001 D17-c3 1611 chr3L 6623456 6623506 chr3L 6623576 6623627 26 119 5.5 5.0 5.2 4.2 171 chr3L 6623456 intergenic not near genes chr3L 6623542 intergenic GluRIA + chr3L 6623627 intergenic GluRIA + chr3L_26_6620001 chr3L_6620001 D17-c3 1612 chr3L 6642862 6642874 chr3L 6642967 6642979 4 105 0.0 0.0 0.0 4.0 117 chr3L 6642862 intergenic CR45239 + chr3L 6642920 intergenic CR45239 + chr3L 6642979 intergenic CR45239 + chr3L_4_6640001 chr3L_6640001 D17-c3 1613 chr3L 6652707 6652759 chr3L 6652826 6652878 12 119 8.0 9.0 8.5 1.3 171 chr3L 6652707 intergenic not near genes chr3L 6652792 intergenic not near genes chr3L 6652878 intergenic not near genes chr3L_12_6650001 chr3L_6650001 D17-c3 1614 chr3L 6660975 6661031 chr3L 6661078 6661135 39 101 11.5 14.0 12.8 2.8 160 chr3L 6660975 intergenic not near genes chr3L 6661055 intergenic not near genes chr3L 6661135 intergenic not near genes chr3L_39_6660001 chr3L_6660001 D17-c3 1615 chr3L 6681324 6681366 chr3L 6681426 6681468 18 98 6.5 7.5 7.0 2.2 144 chr3L 6681324 intergenic not near genes chr3L 6681396 intergenic not near genes chr3L 6681468 intergenic not near genes chr3L_18_6680001 chr3L_6680001 D17-c3 1616 chr3L 6727764 6727811 chr3L 6727887 6727934 23 123 5.0 6.5 5.8 3.4 170 chr3L 6727764 intergenic CR45417 + chr3L 6727849 intergenic CR45417 + chr3L 6727934 intergenic CR45417 + chr3L_23_6725001 chr3L_6725001 D17-c3 1617 chr3L 6781100 6781118 chr3L 6783138 6783156 Doc 6 2037 7.5 0.0 3.8 1.2 2056 chr3L 6781100 intergenic not near genes chr3L 6782128 intergenic not near genes chr3L 6783156 intergenic not near genes chr3L_6_6780001 chr3L_6780001 D17-c3 1618 chr3L 6798627 6798681 chr3L 6798926 6798980 39 299 3.5 10.5 7.0 4.9 353 chr3L 6798627 intergenic not near genes chr3L 6798804 intergenic not near genes chr3L 6798980 intergenic not near genes chr3L_39_6795001 chr3L_6795001 D17-c3 1619 chr3L 6820611 6820630 chr3L 6820720 6820739 4 109 6.0 11.0 8.5 0.4 128 chr3L 6820611 intergenic not near genes chr3L 6820675 intergenic not near genes chr3L 6820739 intergenic not near genes chr3L_4_6820001 chr3L_6820001 D17-c3 1620 chr3L 6835905 6835924 chr3L 6836008 6836027 7 103 3.0 6.5 4.8 1.2 122 chr3L 6835905 intergenic not near genes chr3L 6835966 intergenic not near genes chr3L 6836027 intergenic not near genes chr3L_7_6835001 chr3L_6835001 D17-c3 1621 chr3L 6855906 6855954 chr3L 6860715 6860763 Doc 14 4808 5.5 8.0 6.8 1.8 4857 chr3L 6855906 intergenic not near genes chr3L 6858334 intergenic not near genes chr3L 6860763 intergenic not near genes chr3L_14_6855001 chr3L_6855001 D17-c3 1622 chr3L 6865413 6865455 chr3L 6865532 6865576 4 120 0.0 0.0 0.0 4.0 163 chr3L 6865413 intergenic CR45115 - chr3L 6865494 3` UTR CR45115 - chr3L 6865576 3` UTR CR45115 - chr3L_4_6865001 chr3L_6865001 D17-c3 1623 chr3L 6887500 6887542 chr3L 6895017 6895059 roo 14 7517 7.5 0.5 4.0 2.8 7559 chr3L 6887500 intergenic not near genes chr3L 6891280 intergenic not near genes chr3L 6895059 intergenic not near genes chr3L_14_6890001 chr3L_6890001 D17-c3 1624 chr3L 6900896 6900928 chr3L 6901183 6901215 11 287 8.0 6.0 7.0 1.4 319 chr3L 6900896 intergenic not near genes chr3L 6901056 intergenic not near genes chr3L 6901215 intergenic not near genes chr3L_11_6900001 chr3L_6900001 D17-c3 1625 chr3L 6934318 6934359 chr3L 6934454 6934495 15 136 5.5 5.0 5.2 2.4 177 chr3L 6934318 exon CG14820 + chr3L 6934406 intron CG14820 + chr3L 6934495 exon CG14820 + chr3L_15_6930001 chr3L_6930001 D17-c3 1626 chr3L 6981921 6981938 chr3L 6982100 6982117 5 179 0.0 3.5 1.8 1.8 196 chr3L 6981921 intergenic not near genes chr3L 6982019 intergenic not near genes chr3L 6982117 intergenic not near genes chr3L_5_6980001 chr3L_6980001 D17-c3 1627 chr3L 6994890 6994906 chr3L 6995526 6995542 BS 4 636 0.0 9.0 4.5 0.7 652 chr3L 6994890 intergenic bin + chr3L 6995216 intergenic not near genes chr3L 6995542 intergenic not near genes chr3L_4_6995001 chr3L_6995001 D17-c3 1628 chr3L 7033154 7033205 chr3L 7033257 7033312 35 105 8.0 11.5 9.8 3.2 158 chr3L 7033154 intron Mp + chr3L 7033233 intron Mp + chr3L 7033312 intron Mp + chr3L_35_7030001 chr3L_7030001 D17-c3 1629 chr3L 7040659 7040712 chr3L 7040764 7040773 7 97 5.0 0.0 2.5 2.0 114 chr3L 7040659 intron Mp + chr3L 7040716 intron Mp + chr3L 7040773 intron Mp + chr3L_7_7040001 chr3L_7040001 D17-c3 1630 chr3L 7041901 7041924 chr3L 7042004 7042027 11 103 9.5 8.0 8.8 1.1 126 chr3L 7041901 intron Mp + chr3L 7041964 intron Mp + chr3L 7042027 intron Mp + chr3L_11_7040001 chr3L_7040001 D17-c3 1631 chr3L 7085145 7085163 chr3L 7085253 7085272 9 108 14.5 2.5 8.5 0.9 127 chr3L 7085145 intergenic not near genes chr3L 7085208 intergenic not near genes chr3L 7085272 intergenic not near genes chr3L_9_7085001 chr3L_7085001 D17-c3 1632 chr3L 7085174 7085197 chr3L 7085251 7085289 10 100 7.0 2.5 4.8 1.7 115 chr3L 7085174 intergenic not near genes chr3L 7085232 intergenic not near genes chr3L 7085289 intergenic not near genes chr3L_10_7085001 chr3L_7085001 D17-c3 1633 chr3L 7100155 7100412 chr3L 7100256 7100524 7 103 15.5 5.5 10.5 0.6 369 chr3L 7100155 intron form3 + chr3L 7100340 intron form3 + chr3L 7100524 intron form3 + chr3L_7_7100001 chr3L_7100001 D17-c3 1634 chr3L 7164537 7164570 chr3L 7164642 7164676 29 106 8.0 10.5 9.2 2.8 139 chr3L 7164537 intron Dscam2 - chr3L 7164606 intron Dscam2 - chr3L 7164676 intron Dscam2 - chr3L_29_7160001 chr3L_7160001 D17-c3 1635 chr3L 7174015 7174060 chr3L 7174118 7174138 8 94 4.0 2.5 3.2 1.9 123 chr3L 7174015 intron Dscam2 - chr3L 7174076 intron Dscam2 - chr3L 7174138 intron Dscam2 - chr3L_8_7170001 chr3L_7170001 D17-c3 1636 chr3L 7185194 7185245 chr3L 7185310 7185361 6 116 3.5 4.5 4.0 1.2 167 chr3L 7185194 intron Dscam2 - chr3L 7185278 intron Dscam2 - chr3L 7185361 intron Dscam2 - chr3L_6_7185001 chr3L_7185001 D17-c3 1637 chr3L 7187385 7187415 chr3L 7187492 7187522 5 107 0.0 0.0 0.0 5.0 137 chr3L 7187385 intron Dscam2 - chr3L 7187454 intron Dscam2 - chr3L 7187522 intron Dscam2 - chr3L_5_7185001 chr3L_7185001 D17-c3 1638 chr3L 7236610 7236622 chr3L 7236811 7236823 5 201 4.0 5.0 4.5 0.9 213 chr3L 7236610 intergenic CG14829 - chr3L 7236716 intergenic CG14829 - chr3L 7236823 3` UTR CG14829 - chr3L_5_7235001 chr3L_7235001 D17-c3 1639 chr3L 7274702 7274739 chr3L 7274831 7274868 11 129 10.5 6.0 8.2 1.2 166 chr3L 7274702 intron unc-13-4A - chr3L 7274785 intron unc-13-4A - chr3L 7274868 intron unc-13-4A - chr3L_11_7270001 chr3L_7270001 D17-c3 1640 chr3L 7285423 7285478 chr3L 7285526 7285581 10 103 7.0 3.5 5.2 1.6 158 chr3L 7285423 intron unc-13-4A - chr3L 7285502 intron unc-13-4A - chr3L 7285581 intron unc-13-4A - chr3L_10_7285001 chr3L_7285001 D17-c3 1641 chr3L 7292082 7292120 chr3L 7292187 7292211 11 104 10.0 5.5 7.8 1.2 129 chr3L 7292082 intron unc-13-4A - chr3L 7292146 intron unc-13-4A - chr3L 7292211 intron unc-13-4A - chr3L_11_7290001 chr3L_7290001 D17-c3 1642 chr3L 7298580 7298639 chr3L 7575015 7575069 21 276432 38.0 41.5 39.8 0.5 276489 chr3L 7298580 intron unc-13-4A - chr3L 7436824 intron,3` UTR CG42458 +,CG14835 - chr3L 7575069 intergenic not near genes chr3L_21_7435001 chr3L_7435001 D17-c3 1643 chr3L 7328998 7329026 chr3L 7329110 7329138 5 112 1.0 8.5 4.8 0.9 140 chr3L 7328998 intergenic CG42307 +,mus312 +,CG8602 - chr3L 7329068 intergenic CG42307 +,mus312 +,CG8602 - chr3L 7329138 5` UTR,5` UTR CG42307 +,mus312 + chr3L_5_7325001 chr3L_7325001 D17-c3 1644 chr3L 7355719 7355769 chr3L 7363602 7363657 51 7884 95.5 78.0 86.8 0.6 7938 chr3L 7355719 exon CTCF - chr3L 7359688 exon pst - chr3L 7363657 exon Sec63 + chr3L_51_7355001 chr3L_7355001 D17-c3 1645 chr3L 7377291 7377316 chr3L 7380421 7380446 297 13 3130 8.5 0.5 4.5 2.4 3155 chr3L 7377291 intron SMSr - chr3L 7378868 intron SMSr - chr3L 7380446 intron SMSr - chr3L_13_7375001 chr3L_7375001 D17-c3 1646 chr3L 7447923 7447978 chr3L 7448052 7448107 20 129 4.5 9.0 6.8 2.6 184 chr3L 7447923 intron CG42458 + chr3L 7448015 intron CG42458 + chr3L 7448107 exon CG42458 + chr3L_20_7445001 chr3L_7445001 D17-c3 1647 chr3L 7498740 7498783 chr3L 7503542 7503585 F-element 19 4802 7.0 5.5 6.2 2.6 4845 chr3L 7498740 5` UTR CG8539 - chr3L 7501162 intergenic not near genes chr3L 7503585 intergenic not near genes chr3L_19_7500001 chr3L_7500001 D17-c3 1648 chr3L 7505428 7505442 chr3L 7505530 7505544 9 102 4.5 10.5 7.5 1.1 116 chr3L 7505428 intergenic CG7548 - chr3L 7505486 intergenic CG7548 - chr3L 7505544 3` UTR CG7548 - chr3L_9_7505001 chr3L_7505001 D17-c3 1649 chr3L 7508653 7508706 chr3L 7508762 7508814 35 109 7.5 0.0 3.8 7.3 161 chr3L 7508653 intergenic not near genes chr3L 7508734 intergenic not near genes chr3L 7508814 intergenic not near genes chr3L_35_7505001 chr3L_7505001 D17-c3 1650 chr3L 7532886 7532935 chr3L 7532989 7533038 16 103 4.5 4.5 4.5 2.9 152 chr3L 7532886 intron lqf + chr3L 7532962 intron lqf + chr3L 7533038 intron lqf + chr3L_16_7530001 chr3L_7530001 D17-c3 1651 chr3L 7572259 7572297 chr3L 7572371 7572409 26 111 11.5 7.5 9.5 2.5 150 chr3L 7572259 intergenic not near genes chr3L 7572334 intergenic not near genes chr3L 7572409 intergenic not near genes chr3L_26_7570001 chr3L_7570001 D17-c3 1652 chr3L 7591122 7591177 chr3L 7591235 7591293 45 112 11.5 7.5 9.5 4.3 171 chr3L 7591122 intergenic CG7716 - chr3L 7591208 intergenic CG7716 - chr3L 7591293 intergenic CG7716 - chr3L_45_7590001 chr3L_7590001 D17-c3 1653 chr3L 7287656 7287711 chr3L 7600610 7600665 14 312954 37.5 58.0 47.8 0.3 313009 chr3L 7287656 intron unc-13-4A - chr3L 7444160 intron CG42458 + chr3L 7600665 intron CG33275 + chr3L_14_7440001 chr3L_7440001 D17-c3 1654 chr3L 7617670 7617681 chr3L 7617804 7617815 12 134 28.0 0.5 14.2 0.8 145 chr3L 7617670 intron CG33275 + chr3L 7617742 intron CG33275 + chr3L 7617815 intron CG33275 + chr3L_12_7615001 chr3L_7615001 D17-c3 1655 chr3L 7749470 7749471 chr3L 11777678 11777678 8 4028207 17.0 61.0 39.0 0.2 4028208 chr3L 7749470 intron,3` UTR CG32373 +,CG13685 + chr3L 9763574 5` UTR CG8177 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_8_9760001 chr3L_9760001 D17-c3 1656 chr3L 7752532 7752563 chr3L 7752916 7752947 11 383 7.5 7.0 7.2 1.3 415 chr3L 7752532 intron CG32373 + chr3L 7752740 intron CG32373 + chr3L 7752947 intron CG32373 + chr3L_11_7750001 chr3L_7750001 D17-c3 1657 chr3L 7775481 7775534 chr3L 7775606 7775644 43 121 15.0 8.5 11.8 3.4 163 chr3L 7775481 intron Clk - chr3L 7775562 5` UTR Clk - chr3L 7775644 intergenic Clk - chr3L_43_7775001 chr3L_7775001 D17-c3 1658 chr3L 7793695 7793736 chr3L 7800772 7800813 297 22 7077 12.5 10.0 11.2 1.8 7118 chr3L 7793695 intron CG32369 - chr3L 7797254 intron CG32369 - chr3L 7800813 intron CG32369 - chr3L_22_7795001 chr3L_7795001 D17-c3 1659 chr3L 7801528 7801546 chr3L 7801634 7801652 13 106 4.5 10.0 7.2 1.6 124 chr3L 7801528 intron CG32369 - chr3L 7801590 intron CG32369 - chr3L 7801652 intron CG32369 - chr3L_13_7800001 chr3L_7800001 D17-c3 1660 chr3L 7814680 7814734 chr3L 7814789 7814844 11 110 3.5 1.0 2.2 3.4 164 chr3L 7814680 3` UTR Pdp1 - chr3L 7814762 3` UTR Pdp1 - chr3L 7814844 3` UTR Pdp1 - chr3L_11_7810001 chr3L_7810001 D17-c3 1661 chr3L 7845367 7845398 chr3L 7845470 7845505 6 107 2.0 1.0 1.5 2.4 138 chr3L 7845367 intron Pdp1 - chr3L 7845436 intron Pdp1 - chr3L 7845505 intron Pdp1 - chr3L_6_7845001 chr3L_7845001 D17-c3 1662 chr3L 7865549 7865583 chr3L 7865714 7865747 4 165 6.0 0.0 3.0 1.0 198 chr3L 7865549 intron Pdp1 - chr3L 7865648 intron Pdp1 - chr3L 7865747 intron Pdp1 - chr3L_4_7865001 chr3L_7865001 D17-c3 1663 chr3L 7869641 7869664 chr3L 7869746 7869759 7 103 16.5 16.5 16.5 0.4 118 chr3L 7869641 exon CG32365 + chr3L 7869700 exon CG32365 + chr3L 7869759 exon CG32365 + chr3L_7_7865001 chr3L_7865001 D17-c3 1664 chr3L 7886482 7886539 chr3L 7889029 7889082 Stalker4 8 2543 0.0 4.5 2.2 2.5 2600 chr3L 7886482 intron CG32365 + chr3L 7887782 intron CG32365 + chr3L 7889082 intron CG32365 + chr3L_8_7885001 chr3L_7885001 D17-c3 1665 chr3L 7916813 7916854 chr3L 7926009 7926050 roo 12 9196 2.5 5.0 3.8 2.5 9237 chr3L 7916813 3` UTR syd - chr3L 7921432 intron syd - chr3L 7926050 3` UTR syd - chr3L_12_7920001 chr3L_7920001 D17-c3 1666 chr3L 7985345 7985387 chr3L 7987698 7987740 NOF 16 2353 6.5 7.5 7.0 2.0 2395 chr3L 7985345 intron nmo + chr3L 7986542 intron nmo + chr3L 7987740 intron nmo + chr3L_16_7985001 chr3L_7985001 D17-c3 1667 chr3L 7997595 7997624 chr3L 7997701 7997710 7 103 7.0 8.0 7.5 0.8 115 chr3L 7997595 intron nmo + chr3L 7997652 intron nmo + chr3L 7997710 intron nmo + chr3L_7_7995001 chr3L_7995001 D17-c3 1668 chr3L 8443542 8443583 chr3L 8443648 8443690 4 107 3.5 5.5 4.5 0.7 148 chr3L 8443542 3` UTR CG6983 - chr3L 8443616 3` UTR CG6983 - chr3L 8443690 3` UTR CG6983 - chr3L_4_8440001 chr3L_8440001 D17-c3 1669 chr3L 8456451 8456485 chr3L 8456569 8456603 27 116 17.0 18.0 17.5 1.5 152 chr3L 8456451 intron Gug + chr3L 8456527 intron Gug + chr3L 8456603 intron Gug + chr3L_27_8455001 chr3L_8455001 D17-c3 1670 chr3L 8481793 8481798 chr3L 8490930 8490959 roo 9 9159 17.5 12.0 14.8 0.6 9166 chr3L 8481793 intron CG43163 - chr3L 8486376 intron CG43163 - chr3L 8490959 intron CG43163 - chr3L_9_8485001 chr3L_8485001 D17-c3 1671 chr3L 8498275 8498324 chr3L 8505767 8505816 blood 13 7492 7.0 6.5 6.8 1.7 7541 chr3L 8498275 intron CG43163 - chr3L 8502046 intron CG43163 - chr3L 8505816 intron CG43163 - chr3L_13_8500001 chr3L_8500001 D17-c3 1672 chr3L 8558635 8558688 chr3L 8558751 8558804 14 116 5.0 4.5 4.8 2.4 169 chr3L 8558635 intron rhea + chr3L 8558720 intron rhea + chr3L 8558804 intron rhea + chr3L_14_8555001 chr3L_8555001 D17-c3 1673 chr3L 8691133 8691191 chr3L 8691240 8691298 25 107 7.0 8.5 7.8 2.8 165 chr3L 8691133 intergenic not near genes chr3L 8691216 intergenic not near genes chr3L 8691298 intergenic not near genes chr3L_25_8690001 chr3L_8690001 D17-c3 1674 chr3L 8751688 8751704 chr3L 8751789 8751809 8 104 3.5 13.0 8.2 0.9 121 chr3L 8751688 intergenic CR44527 - chr3L 8751748 intergenic CR44527 - chr3L 8751809 intergenic CR44527 - chr3L_8_8750001 chr3L_8750001 D17-c3 1675 chr3L 8782109 8782153 chr3L 8782254 8782304 22 151 2.0 9.5 5.8 3.2 195 chr3L 8782109 intron Fhos + chr3L 8782206 intron Fhos + chr3L 8782304 intron Fhos + chr3L_22_8780001 chr3L_8780001 D17-c3 1676 chr3L 8791253 8791309 chr3L 8796698 8796753 I-element 15 5445 8.0 0.0 4.0 3.0 5500 chr3L 8791253 exon Fhos + chr3L 8794003 intron Fhos + chr3L 8796753 intron Fhos + chr3L_15_8790001 chr3L_8790001 D17-c3 1677 chr3L 8837352 8837402 chr3L 8837457 8837507 23 101 9.5 10.5 10.0 2.1 155 chr3L 8837352 intron,exon dally +,CG32026 + chr3L 8837430 intron,exon dally +,CG32026 + chr3L 8837507 intron,exon dally +,CG32026 + chr3L_23_8835001 chr3L_8835001 D17-c3 1678 chr3L 8849192 8849244 chr3L 8849297 8849354 22 105 7.5 9.0 8.2 2.4 162 chr3L 8849192 intron dally + chr3L 8849273 intron dally + chr3L 8849354 intron dally + chr3L_22_8845001 chr3L_8845001 D17-c3 1679 chr3L 8899083 8899114 chr3L 8899193 8899219 8 109 11.5 5.0 8.2 0.9 136 chr3L 8899083 intron TrpA1 - chr3L 8899151 intron TrpA1 - chr3L 8899219 intron TrpA1 - chr3L_8_8895001 chr3L_8895001 D17-c3 1680 chr3L 8928244 8928294 chr3L 8928345 8928395 10 101 6.5 6.5 6.5 1.3 151 chr3L 8928244 intron Tsp66E + chr3L 8928320 intron Tsp66E + chr3L 8928395 intron Tsp66E + chr3L_10_8925001 chr3L_8925001 D17-c3 1681 chr3L 9003922 9003934 chr3L 9004032 9004044 5 110 21.5 7.5 14.5 0.3 122 chr3L 9003922 intergenic not near genes chr3L 9003983 intergenic not near genes chr3L 9004044 intergenic not near genes chr3L_5_9000001 chr3L_9000001 D17-c3 1682 chr3L 9003936 9003973 chr3L 9004031 9004083 20 109 9.5 7.5 8.5 2.1 147 chr3L 9003936 intergenic not near genes chr3L 9004010 intergenic not near genes chr3L 9004083 intergenic not near genes chr3L_20_9000001 chr3L_9000001 D17-c3 1683 chr3L 9011113 9011119 chr3L 9011224 9011230 4 111 8.0 4.5 6.2 0.6 117 chr3L 9011113 intergenic not near genes chr3L 9011172 intergenic not near genes chr3L 9011230 intergenic not near genes chr3L_4_9010001 chr3L_9010001 D17-c3 1684 chr3L 9013690 9013694 chr3L 18417066 18417066 9 9403375 48.5 31.0 39.8 0.2 9403376 chr3L 9013690 intron Doc2 - chr3L 13715378 intron bru-3 - chr3L 18417066 intergenic not near genes chr3L_9_13715001 chr3L_13715001 D17-c3 1685 chr3L 9030408 9030446 chr3L 9030512 9030550 12 104 2.5 3.5 3.0 3.0 142 chr3L 9030408 intergenic not near genes chr3L 9030479 intergenic not near genes chr3L 9030550 intergenic not near genes chr3L_12_9030001 chr3L_9030001 D17-c3 1686 chr3L 9047066 9047083 chr3L 9047178 9047195 6 112 0.0 0.5 0.2 5.0 129 chr3L 9047066 intergenic CG5144 + chr3L 9047130 intergenic CG5144 + chr3L 9047195 intergenic CG5144 + chr3L_6_9045001 chr3L_9045001 D17-c3 1687 chr3L 9076902 9076948 chr3L 9084487 9084533 412 27 7584 13.0 8.5 10.8 2.3 7631 chr3L 9076902 exon Tequila + chr3L 9080718 intron Tequila + chr3L 9084533 exon Tequila + chr3L_27_9080001 chr3L_9080001 D17-c3 1688 chr3L 9118334 9118339 chr3L 9118439 9118444 4 105 20.0 22.0 21.0 0.2 110 chr3L 9118334 intron bol - chr3L 9118389 intron bol - chr3L 9118444 intron bol - chr3L_4_9115001 chr3L_9115001 D17-c3 1689 chr3L 9128175 9128217 chr3L 9128285 9128327 15 110 8.5 7.0 7.8 1.7 152 chr3L 9128175 intron bol - chr3L 9128251 intron bol - chr3L 9128327 intron bol - chr3L_15_9125001 chr3L_9125001 D17-c3 1690 chr3L 9130535 9130580 chr3L 9134320 9134366 412 27 3785 11.5 10.0 10.8 2.3 3831 chr3L 9130535 intergenic bol - chr3L 9132450 intergenic not near genes chr3L 9134366 intergenic Dhpr + chr3L_27_9130001 chr3L_9130001 D17-c3 1691 chr3L 9164672 9164707 chr3L 9166164 9166199 hobo 16 1492 13.0 0.0 6.5 2.1 1527 chr3L 9164672 intron Rdl - chr3L 9165436 intron Rdl - chr3L 9166199 intron Rdl - chr3L_16_9165001 chr3L_9165001 D17-c3 1692 chr3L 9219221 9219269 chr3L 9219918 9219966 jockey 38 696 6.5 10.5 8.5 4.0 745 chr3L 9219221 intergenic not near genes chr3L 9219594 intergenic not near genes chr3L 9219966 intergenic not near genes chr3L_38_9215001 chr3L_9215001 D17-c3 1693 chr3L 9254496 9254545 chr3L 9254814 9254863 15 317 5.5 8.0 6.8 1.9 367 chr3L 9254496 intron GluRIB + chr3L 9254680 intron GluRIB + chr3L 9254863 intron GluRIB + chr3L_15_9250001 chr3L_9250001 D17-c3 1694 chr3L 9270590 9270646 chr3L 9278370 9278426 roo 15 7777 6.5 8.5 7.5 1.8 7836 chr3L 9270590 intron GluRIB + chr3L 9274508 intron GluRIB + chr3L 9278426 exon GluRIB + chr3L_15_9270001 chr3L_9270001 D17-c3 1695 chr3L 9279873 9279922 chr3L 9279982 9280032 22 106 8.5 4.0 6.2 3.1 159 chr3L 9279873 intron GluRIB + chr3L 9279952 intron GluRIB + chr3L 9280032 intron GluRIB + chr3L_22_9275001 chr3L_9275001 D17-c3 1696 chr3L 9307796 9307796 chr3L 22908066 22908067 5 13600270 21.5 38.0 29.8 0.2 13600271 chr3L 9307796 intergenic not near genes chr3L 16107932 intron Zn72D - chr3L 22908067 intergenic not near genes chr3L_5_16105001 chr3L_16105001 D17-c3 1697 chr3L 9312701 9312733 chr3L 9312804 9312836 13 103 12.0 0.5 6.2 1.8 135 chr3L 9312701 intergenic not near genes chr3L 9312768 intergenic not near genes chr3L 9312836 intergenic not near genes chr3L_13_9310001 chr3L_9310001 D17-c3 1698 chr3L 9313026 9313027 chr3L 11777678 11777678 6 2464652 27.5 61.0 44.2 0.1 2464652 chr3L 9313026 intergenic not near genes chr3L 10545352 intron A2bp1 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_6_10545001 chr3L_10545001 D17-c3 1699 chr3L 9328367 9328411 chr3L 9328503 9328547 31 134 10.0 9.5 9.8 2.9 180 chr3L 9328367 intergenic not near genes chr3L 9328457 intergenic not near genes chr3L 9328547 intergenic not near genes chr3L_31_9325001 chr3L_9325001 D17-c3 1700 chr3L 9348440 9348703 chr3L 9348967 9349088 15 516 0.0 1.0 0.5 10.0 648 chr3L 9348440 intergenic PGRP-LC + chr3L 9348764 intergenic PGRP-LC + chr3L 9349088 intergenic not near genes chr3L_15_9345001 chr3L_9345001 D17-c3 1701 chr3L 9359574 9359614 chr3L 9359690 9359730 18 116 7.0 7.0 7.0 2.2 156 chr3L 9359574 3` UTR CG32039 + chr3L 9359652 3` UTR CG32039 + chr3L 9359730 3` UTR CG32039 + chr3L_18_9355001 chr3L_9355001 D17-c3 1702 chr3L 9403011 9403066 chr3L 9403146 9403201 12 134 3.5 3.5 3.5 2.7 190 chr3L 9403011 intergenic not near genes chr3L 9403106 intergenic not near genes chr3L 9403201 intergenic not near genes chr3L_12_9400001 chr3L_9400001 D17-c3 1703 chr3L 9443491 9443509 chr3L 9445307 9445325 S-element 4 1816 4.5 0.0 2.2 1.2 1834 chr3L 9443491 intron CG33926 + chr3L 9444408 intron CG33926 + chr3L 9445325 intron CG33926 + chr3L_4_9440001 chr3L_9440001 D17-c3 1704 chr3L 9492375 9492406 chr3L 9492481 9492507 8 105 15.0 0.5 7.8 0.9 132 chr3L 9492375 intergenic CG32037 - chr3L 9492441 intergenic CG32037 - chr3L 9492507 intergenic CG32037 - chr3L_8_9490001 chr3L_9490001 D17-c3 1705 chr3L 9498179 9498229 chr3L 9498281 9498331 16 101 2.5 4.0 3.2 3.8 152 chr3L 9498179 intron path - chr3L 9498255 intron path - chr3L 9498331 intron path - chr3L_16_9495001 chr3L_9495001 D17-c3 1706 chr3L 9501683 9501712 chr3L 9502194 9502223 roo 12 511 7.0 7.0 7.0 1.5 540 chr3L 9501683 intron path - chr3L 9501953 intron path - chr3L 9502223 intron path - chr3L_12_9500001 chr3L_9500001 D17-c3 1707 chr3L 9501714 9501729 chr3L 9502184 9502240 roo 6 504 5.0 5.5 5.2 1.0 526 chr3L 9501714 intron path - chr3L 9501977 intron path - chr3L 9502240 intron path - chr3L_6_9500001 chr3L_9500001 D17-c3 1708 chr3L 9503440 9503461 chr3L 9503554 9503575 8 114 7.5 10.0 8.8 0.8 135 chr3L 9503440 intron path - chr3L 9503508 intron path - chr3L 9503575 intron path - chr3L_8_9500001 chr3L_9500001 D17-c3 1709 chr3L 9533734 9533785 chr3L 9541319 9541370 412 19 7584 10.0 22.0 16.0 1.1 7636 chr3L 9533734 intergenic not near genes chr3L 9537552 intergenic not near genes chr3L 9541370 intergenic not near genes chr3L_19_9535001 chr3L_9535001 D17-c3 1710 chr3L 9555947 9555958 chr3L 9556051 9556062 5 104 7.0 12.5 9.8 0.5 115 chr3L 9555947 intron CG42673 + chr3L 9556004 intron CG42673 + chr3L 9556062 intron CG42673 + chr3L_5_9555001 chr3L_9555001 D17-c3 1711 chr3L 9571884 9571925 chr3L 9572257 9572298 jockey 17 373 7.5 2.0 4.8 2.9 414 chr3L 9571884 intron CG42673 + chr3L 9572091 intron CG42673 + chr3L 9572298 intron CG42673 + chr3L_17_9570001 chr3L_9570001 D17-c3 1712 chr3L 9572283 9572325 chr3L 9572387 9572429 4 104 2.0 7.0 4.5 0.7 146 chr3L 9572283 intron CG42673 + chr3L 9572356 intron CG42673 + chr3L 9572429 intron CG42673 + chr3L_4_9570001 chr3L_9570001 D17-c3 1713 chr3L 9575887 9575939 chr3L 9580992 9581034 jockey 29 5103 8.0 6.5 7.2 3.5 5147 chr3L 9575887 intron CG42673 + chr3L 9578460 intron CG42673 + chr3L 9581034 intron CG42673 + chr3L_29_9575001 chr3L_9575001 D17-c3 1714 chr3L 9639004 9639059 chr3L 9639114 9639169 16 110 0.5 10.0 5.2 2.6 165 chr3L 9639004 intron,3` UTR fry -,CG8329 + chr3L 9639086 intron fry - chr3L 9639169 intron fry - chr3L_16_9635001 chr3L_9635001 D17-c3 1715 chr3L 9646443 9646494 chr3L 9646593 9646644 12 148 8.0 1.0 4.5 2.2 201 chr3L 9646443 intron,intron fry -,CG33696 + chr3L 9646544 intron,intron fry -,CG33696 + chr3L 9646644 intron,intron fry -,CG33696 + chr3L_12_9645001 chr3L_9645001 D17-c3 1716 chr3L 9646781 9646835 chr3L 9646904 9646958 12 122 4.0 4.5 4.2 2.3 177 chr3L 9646781 intron,intron fry -,CG33696 + chr3L 9646870 intron,intron fry -,CG33696 + chr3L 9646958 intron,intron fry -,CG33696 + chr3L_12_9645001 chr3L_9645001 D17-c3 1717 chr3L 9665817 9665860 chr3L 9666058 9666101 12 239 8.0 6.5 7.2 1.5 284 chr3L 9665817 intron fry - chr3L 9665959 intron fry - chr3L 9666101 intron fry - chr3L_12_9665001 chr3L_9665001 D17-c3 1718 chr3L 9740684 9740720 chr3L 9741142 9741178 16 458 13.5 8.5 11.0 1.3 494 chr3L 9740684 intron CG42268 - chr3L 9740931 intron CG42268 - chr3L 9741178 intron CG42268 - chr3L_16_9740001 chr3L_9740001 D17-c3 1719 chr3L 9750629 9750646 chr3L 9750730 9750747 12 101 5.5 5.5 5.5 1.8 118 chr3L 9750629 intron CG42268 - chr3L 9750688 intron CG42268 - chr3L 9750747 intron CG42268 - chr3L_12_9750001 chr3L_9750001 D17-c3 1720 chr3L 9775344 9775397 chr3L 9775728 9775782 15 385 0.5 8.5 4.5 2.7 438 chr3L 9775344 intron CG8177 + chr3L 9775563 intron CG8177 + chr3L 9775782 intron CG8177 + chr3L_15_9775001 chr3L_9775001 D17-c3 1721 chr3L 9848495 9848542 chr3L 9848596 9848608 10 92 6.5 0.0 3.2 2.4 113 chr3L 9848495 intron RasGAP1 - chr3L 9848552 intron RasGAP1 - chr3L 9848608 intron RasGAP1 - chr3L_10_9845001 chr3L_9845001 D17-c3 1722 chr3L 9929647 9929700 chr3L 9938454 9938506 roo 15 8806 2.5 5.5 4.0 3.0 8859 chr3L 9929647 intron CG34356 + chr3L 9934076 intron CG34356 + chr3L 9938506 intron CG34356 + chr3L_15_9930001 chr3L_9930001 D17-c3 1723 chr3L 10003127 10003177 chr3L 10003249 10003299 15 122 5.5 5.5 5.5 2.3 172 chr3L 10003127 intron dpr6 + chr3L 10003213 intron dpr6 + chr3L 10003299 intron dpr6 + chr3L_15_10000001 chr3L_10000001 D17-c3 1724 chr3L 10007165 10007205 chr3L 10007293 10007333 13 128 3.5 3.0 3.2 3.1 168 chr3L 10007165 intron dpr6 + chr3L 10007249 intron dpr6 + chr3L 10007333 intron dpr6 + chr3L_13_10005001 chr3L_10005001 D17-c3 1725 chr3L 10037486 10037505 chr3L 10644808 10644827 4 607322 26.5 15.5 21.0 0.2 607341 chr3L 10037486 intron dpr6 + chr3L 10341156 intergenic not near genes chr3L 10644827 intron CG32066 - chr3L_4_10340001 chr3L_10340001 D17-c3 1726 chr3L 10099063 10099116 chr3L 10099173 10099226 22 106 2.0 8.5 5.2 3.5 163 chr3L 10099063 intron dpr6 + chr3L 10099144 intron dpr6 + chr3L 10099226 intron dpr6 + chr3L_22_10095001 chr3L_10095001 D17-c3 1727 chr3L 10102035 10102051 chr3L 10102156 10102172 11 121 0.5 11.0 5.8 1.6 137 chr3L 10102035 intron dpr6 + chr3L 10102104 intron dpr6 + chr3L 10102172 intron dpr6 + chr3L_11_10100001 chr3L_10100001 D17-c3 1728 chr3L 10102054 10102065 chr3L 10102153 10102186 5 113 0.5 10.5 5.5 0.8 132 chr3L 10102054 intron dpr6 + chr3L 10102120 intron dpr6 + chr3L 10102186 intron dpr6 + chr3L_5_10100001 chr3L_10100001 D17-c3 1729 chr3L 10161430 10161456 chr3L 10161534 10161559 15 104 1.0 13.5 7.2 1.8 129 chr3L 10161430 intron dpr10 - chr3L 10161494 intron dpr10 - chr3L 10161559 intron dpr10 - chr3L_15_10160001 chr3L_10160001 D17-c3 1730 chr3L 10214706 10214831 chr3L 10214818 10214958 27 134 0.0 0.0 0.0 27.0 252 chr3L 10214706 intergenic not near genes chr3L 10214832 intergenic not near genes chr3L 10214958 intergenic not near genes chr3L_27_10210001 chr3L_10210001 D17-c3 1731 chr3L 10222715 10222776 chr3L 10222820 10222881 20 104 3.5 5.5 4.5 3.6 166 chr3L 10222715 intron scramb1 - chr3L 10222798 intron scramb1 - chr3L 10222881 intron scramb1 - chr3L_20_10220001 chr3L_10220001 D17-c3 1732 chr3L 10245623 10245673 chr3L 10245795 10245835 12 171 5.0 3.0 4.0 2.4 212 chr3L 10245623 intergenic not near genes chr3L 10245729 intergenic not near genes chr3L 10245835 intergenic not near genes chr3L_12_10245001 chr3L_10245001 D17-c3 1733 chr3L 10298652 10298699 chr3L 10298764 10298811 16 112 0.0 4.0 2.0 5.3 159 chr3L 10298652 intergenic not near genes chr3L 10298732 intergenic not near genes chr3L 10298811 intergenic not near genes chr3L_16_10295001 chr3L_10295001 D17-c3 1734 chr3L 10308721 10308766 chr3L 10308823 10308868 19 101 4.5 10.0 7.2 2.3 147 chr3L 10308721 intergenic not near genes chr3L 10308794 intergenic not near genes chr3L 10308868 intergenic not near genes chr3L_19_10305001 chr3L_10305001 D17-c3 1735 chr3L 10314102 10314146 chr3L 10314213 10314257 9 111 4.0 2.5 3.2 2.1 155 chr3L 10314102 intergenic not near genes chr3L 10314180 intergenic not near genes chr3L 10314257 intergenic not near genes chr3L_9_10310001 chr3L_10310001 D17-c3 1736 chr3L 10314457 10314501 chr3L 10314562 10314600 13 104 5.0 2.5 3.8 2.7 143 chr3L 10314457 intergenic not near genes chr3L 10314528 intergenic not near genes chr3L 10314600 intergenic not near genes chr3L_13_10310001 chr3L_10310001 D17-c3 1737 chr3L 10328092 10328129 chr3L 10328229 10328266 14 137 4.5 4.5 4.5 2.5 174 chr3L 10328092 intergenic not near genes chr3L 10328179 intergenic not near genes chr3L 10328266 intergenic not near genes chr3L_14_10325001 chr3L_10325001 D17-c3 1738 chr3L 10383195 10383243 chr3L 10383319 10383367 17 124 4.0 3.5 3.8 3.5 172 chr3L 10383195 intergenic not near genes chr3L 10383281 intergenic not near genes chr3L 10383367 intergenic not near genes chr3L_17_10380001 chr3L_10380001 D17-c3 1739 chr3L 10414923 10414971 chr3L 10417320 10417368 Doc 22 2397 4.0 5.5 4.8 3.8 2445 chr3L 10414923 intergenic CG12362 + chr3L 10416146 intergenic not near genes chr3L 10417368 intergenic not near genes chr3L_22_10415001 chr3L_10415001 D17-c3 1740 chr3L 10417550 10417599 chr3L 10417652 10417685 33 98 4.5 8.5 6.5 4.4 135 chr3L 10417550 intergenic not near genes chr3L 10417618 intergenic not near genes chr3L 10417685 intergenic not near genes chr3L_33_10415001 chr3L_10415001 D17-c3 1741 chr3L 10473830 10473841 chr3L 10473941 10473951 9 111 9.0 13.0 11.0 0.8 121 chr3L 10473830 intergenic not near genes chr3L 10473890 intergenic not near genes chr3L 10473951 intergenic not near genes chr3L_9_10470001 chr3L_10470001 D17-c3 1742 chr3L 10526637 10526652 chr3L 10526743 10526758 8 106 4.5 28.5 16.5 0.5 121 chr3L 10526637 intron A2bp1 + chr3L 10526698 intron A2bp1 + chr3L 10526758 intron A2bp1 + chr3L_8_10525001 chr3L_10525001 D17-c3 1743 chr3L 10563250 10563290 chr3L 10563355 10563395 18 104 9.5 1.0 5.2 2.9 145 chr3L 10563250 intron A2bp1 + chr3L 10563322 intron A2bp1 + chr3L 10563395 intron A2bp1 + chr3L_18_10560001 chr3L_10560001 D17-c3 1744 chr3L 10600430 10600476 chr3L 10600537 10600583 10 107 5.0 5.5 5.2 1.6 153 chr3L 10600430 intergenic not near genes chr3L 10600506 intergenic not near genes chr3L 10600583 intergenic not near genes chr3L_10_10600001 chr3L_10600001 D17-c3 1745 chr3L 10621830 10621869 chr3L 10621937 10621981 11 112 3.0 7.0 5.0 1.8 151 chr3L 10621830 intergenic not near genes chr3L 10621906 intergenic not near genes chr3L 10621981 intergenic not near genes chr3L_11_10620001 chr3L_10620001 D17-c3 1746 chr3L 10730093 10730142 chr3L 10730211 10730261 10 118 4.5 6.0 5.2 1.6 168 chr3L 10730093 intergenic not near genes chr3L 10730177 intergenic not near genes chr3L 10730261 intergenic not near genes chr3L_10_10730001 chr3L_10730001 D17-c3 1747 chr3L 10735806 10735830 chr3L 10735920 10735944 9 114 8.5 6.0 7.2 1.1 138 chr3L 10735806 intergenic not near genes chr3L 10735875 intergenic not near genes chr3L 10735944 intergenic not near genes chr3L_9_10735001 chr3L_10735001 D17-c3 1748 chr3L 10762805 10762862 chr3L 10762914 10762971 21 107 8.0 9.5 8.8 2.1 166 chr3L 10762805 intergenic not near genes chr3L 10762888 intergenic not near genes chr3L 10762971 intergenic not near genes chr3L_21_10760001 chr3L_10760001 D17-c3 1749 chr3L 10820439 10820518 chr3L 10820652 10820692 6 206 0.0 0.5 0.2 5.0 253 chr3L 10820439 intergenic not near genes chr3L 10820566 intergenic not near genes chr3L 10820692 intergenic not near genes chr3L_6_10820001 chr3L_10820001 D17-c3 1750 chr3L 10942032 10942073 chr3L 10942140 10942178 22 105 21.0 7.0 14.0 1.5 146 chr3L 10942032 intergenic not near genes chr3L 10942105 intergenic not near genes chr3L 10942178 intergenic not near genes chr3L_22_10940001 chr3L_10940001 D17-c3 1751 chr3L 10956424 10956469 chr3L 10956567 10956612 19 142 3.5 9.0 6.2 2.6 188 chr3L 10956424 intergenic not near genes chr3L 10956518 intergenic not near genes chr3L 10956612 intergenic not near genes chr3L_19_10955001 chr3L_10955001 D17-c3 1752 chr3L 10958181 10958236 chr3L 10958288 10958343 10 107 3.0 0.0 1.5 4.0 162 chr3L 10958181 intergenic not near genes chr3L 10958262 intergenic not near genes chr3L 10958343 intergenic not near genes chr3L_10_10955001 chr3L_10955001 D17-c3 1753 chr3L 11000069 11000086 chr3L 11000149 11000163 4 77 10.5 10.0 10.2 0.4 94 chr3L 11000069 intron klu - chr3L 11000116 intron klu - chr3L 11000163 intron klu - chr3L_4_11000001 chr3L_11000001 D17-c3 1754 chr3L 11241755 11241767 chr3L 11241862 11241874 4 107 6.5 5.5 6.0 0.6 119 chr3L 11241755 intergenic not near genes chr3L 11241814 intergenic not near genes chr3L 11241874 intergenic not near genes chr3L_4_11240001 chr3L_11240001 D17-c3 1755 chr3L 11245062 11245113 chr3L 11245179 11245227 17 117 26.5 24.5 25.5 0.6 165 chr3L 11245062 intergenic not near genes chr3L 11245144 intergenic not near genes chr3L 11245227 intergenic not near genes chr3L_17_11245001 chr3L_11245001 D17-c3 1756 chr3L 11259439 11259485 chr3L 11259546 11259592 7 107 10.0 14.0 12.0 0.5 153 chr3L 11259439 intergenic not near genes chr3L 11259516 intergenic not near genes chr3L 11259592 intergenic not near genes chr3L_7_11255001 chr3L_11255001 D17-c3 1757 chr3L 11264441 11264490 chr3L 11271418 11271467 17.6 15 6975 8.0 5.5 6.8 1.9 7026 chr3L 11264441 intergenic not near genes chr3L 11267954 intergenic not near genes chr3L 11271467 intergenic not near genes chr3L_15_11265001 chr3L_11265001 D17-c3 1758 chr3L 11285185 11285223 chr3L 11285361 11285400 7 176 16.5 8.0 12.2 0.5 215 chr3L 11285185 intergenic CR45404 + chr3L 11285292 intergenic CR45404 + chr3L 11285400 intergenic CR45404 + chr3L_7_11285001 chr3L_11285001 D17-c3 1759 chr3L 11290599 11290650 chr3L 11290947 11290998 13 347 20.0 13.0 16.5 0.7 399 chr3L 11290599 intron CG6175 - chr3L 11290798 intron CG6175 - chr3L 11290998 intron CG6175 - chr3L_13_11290001 chr3L_11290001 D17-c3 1760 chr3L 11329667 11329724 chr3L 11332897 11332954 jockey 13 3228 10.5 14.0 12.2 1.0 3287 chr3L 11329667 intergenic not near genes chr3L 11331310 intergenic not near genes chr3L 11332954 intergenic not near genes chr3L_13_11330001 chr3L_11330001 D17-c3 1761 chr3L 11339933 11339990 chr3L 11340040 11340099 31 106 18.0 15.5 16.8 1.7 166 chr3L 11339933 intergenic not near genes chr3L 11340016 intergenic not near genes chr3L 11340099 intergenic not near genes chr3L_31_11340001 chr3L_11340001 D17-c3 1762 chr3L 11381554 11381609 chr3L 11381773 11381828 36 219 18.0 17.0 17.5 1.9 274 chr3L 11381554 intergenic not near genes chr3L 11381691 intergenic not near genes chr3L 11381828 intergenic not near genes chr3L_36_11380001 chr3L_11380001 D17-c3 1763 chr3L 11383937 11383995 chr3L 11384041 11384069 40 93 18.5 23.5 21.0 1.8 132 chr3L 11383937 intron CR42755 - chr3L 11384003 3` UTR CR42755 - chr3L 11384069 3` UTR CR42755 - chr3L_40_11380001 chr3L_11380001 D17-c3 1764 chr3L 11386070 11386085 chr3L 11386172 11386187 12 101 27.5 24.0 25.8 0.4 117 chr3L 11386070 intergenic not near genes chr3L 11386128 intergenic not near genes chr3L 11386187 intergenic not near genes chr3L_12_11385001 chr3L_11385001 D17-c3 1765 chr3L 11389433 11389467 chr3L 11389910 11389939 6 476 52.5 6.5 29.5 0.2 506 chr3L 11389433 intergenic not near genes chr3L 11389686 intergenic not near genes chr3L 11389939 intergenic not near genes chr3L_6_11385001 chr3L_11385001 D17-c3 1766 chr3L 11390321 11390340 chr3L 11390462 11390481 14 141 13.0 18.5 15.8 0.8 160 chr3L 11390321 intergenic not near genes chr3L 11390401 intergenic not near genes chr3L 11390481 intergenic not near genes chr3L_14_11390001 chr3L_11390001 D17-c3 1767 chr3L 11432901 11432940 chr3L 11433005 11433044 25 103 11.5 13.0 12.2 1.9 143 chr3L 11432901 intergenic not near genes chr3L 11432972 intergenic not near genes chr3L 11433044 intergenic not near genes chr3L_25_11430001 chr3L_11430001 D17-c3 1768 chr3L 11435535 11435591 chr3L 11435729 11435785 44 194 23.5 13.5 18.5 2.3 250 chr3L 11435535 intergenic CG6149 -,CR44548 + chr3L 11435660 5` UTR CR44548 + chr3L 11435785 5` UTR CR44548 + chr3L_44_11435001 chr3L_11435001 D17-c3 1769 chr3L 11476676 11476702 chr3L 11477211 11477239 5 537 48.5 42.5 45.5 0.1 563 chr3L 11476676 intergenic not near genes chr3L 11476958 intergenic not near genes chr3L 11477239 intergenic not near genes chr3L_5_11475001 chr3L_11475001 D17-c3 1770 chr3L 11488877 11488908 chr3L 11489016 11489047 11 138 24.5 32.5 28.5 0.4 170 chr3L 11488877 intron chrb + chr3L 11488962 intron chrb + chr3L 11489047 intron chrb + chr3L_11_11485001 chr3L_11485001 D17-c3 1771 chr3L 11493141 11493190 chr3L 11493248 11493297 26 107 13.5 15.0 14.2 1.7 156 chr3L 11493141 intron chrb + chr3L 11493219 intron chrb + chr3L 11493297 intron chrb + chr3L_26_11490001 chr3L_11490001 D17-c3 1772 chr3L 11564788 11564803 chr3L 11572406 11572420 412 10 7639 28.0 30.5 29.2 0.3 7632 chr3L 11564788 exon CG33267 + chr3L 11568604 intron CG33267 + chr3L 11572420 exon CG33267 + chr3L_10_11565001 chr3L_11565001 D17-c3 1773 chr3L 11579531 11579585 chr3L 11579662 11579716 33 131 5.5 8.0 6.8 4.2 185 chr3L 11579531 intergenic CG43390 - chr3L 11579624 intergenic CG43390 - chr3L 11579716 intergenic CG43390 - chr3L_33_11575001 chr3L_11575001 D17-c3 1774 chr3L 11580630 11580661 chr3L 11580743 11580774 17 113 1.0 10.5 5.8 2.5 144 chr3L 11580630 intergenic CG43391 - chr3L 11580702 intergenic CG43391 - chr3L 11580774 intergenic CG43391 - chr3L_17_11580001 chr3L_11580001 D17-c3 1775 chr3L 11663085 11663147 chr3L 11663287 11663349 17 200 5.5 0.5 3.0 4.2 264 chr3L 11663085 intron CG32085 - chr3L 11663217 intron CG32085 - chr3L 11663349 intron CG32085 - chr3L_17_11660001 chr3L_11660001 D17-c3 1776 chr3L 11678070 11678125 chr3L 11678182 11678237 16 112 4.0 5.5 4.8 2.8 167 chr3L 11678070 intron CG32085 - chr3L 11678154 intron CG32085 - chr3L 11678237 intron CG32085 - chr3L_16_11675001 chr3L_11675001 D17-c3 1777 chr3L 11708568 11708781 chr3L 11708659 11708887 4 105 1.0 0.5 0.8 2.2 319 chr3L 11708568 intergenic CG11658 -,Ccdc56 +,mtTFB1 + chr3L 11708728 intergenic CG11658 -,Ccdc56 +,mtTFB1 + chr3L 11708887 intergenic Ccdc56 +,mtTFB1 +,CG11658 - chr3L_4_11705001 chr3L_11705001 D17-c3 1778 chr3L 11723062 11723115 chr3L 11727882 11727935 Doc 28 4820 7.0 5.5 6.2 3.9 4873 chr3L 11723062 3` UTR Bmcp + chr3L 11725498 intron Bmcp + chr3L 11727935 3` UTR Bmcp + chr3L_28_11725001 chr3L_11725001 D17-c3 1779 chr3L 11743993 11744009 chr3L 11744126 11744142 13 133 22.0 3.0 12.5 1.0 149 chr3L 11743993 exon CG6024 - chr3L 11744068 intron CG6024 - chr3L 11744142 intron CG6024 - chr3L_13_11740001 chr3L_11740001 D17-c3 1780 chr3L 11744011 11744046 chr3L 11744119 11744179 9 127 9.0 1.5 5.2 1.5 168 chr3L 11744011 exon CG6024 - chr3L 11744095 intron CG6024 - chr3L 11744179 intron CG6024 - chr3L_9_11740001 chr3L_11740001 D17-c3 1781 chr3L 11757894 11757931 chr3L 11758016 11758053 17 122 24.0 0.0 12.0 1.3 159 chr3L 11757894 intron CG6024 - chr3L 11757974 intron CG6024 - chr3L 11758053 intron CG6024 - chr3L_17_11755001 chr3L_11755001 D17-c3 1782 chr3L 802565 802566 chr3L 11777678 11777678 5 10975112 34.0 61.0 47.5 0.1 10975113 chr3L 802565 intergenic not near genes chr3L 6290122 intergenic not near genes chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_5_6290001 chr3L_6290001 D17-c3 1783 chr3L 7749470 7749471 chr3L 11777678 11777678 18 4028207 17.0 61.0 39.0 0.5 4028208 chr3L 7749470 intron,3` UTR CG32373 +,CG13685 + chr3L 9763574 5` UTR CG8177 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_18_9760001 chr3L_9760001 D17-c3 1784 chr3L 9313026 9313027 chr3L 11777678 11777678 8 2464652 27.5 61.0 44.2 0.2 2464652 chr3L 9313026 intergenic not near genes chr3L 10545352 intron A2bp1 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_8_10545001 chr3L_10545001 D17-c3 1785 chr3L 11777678 11777678 chr3L 12163305 12163305 23 385627 58.0 53.0 55.5 0.4 385627 chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L 11970492 exon Muc68E - chr3L 12163305 intron CG9760 - chr3L_23_11970001 chr3L_11970001 D17-c3 1786 chr3L 11826536 11826584 chr3L 11826662 11826717 31 131 11.5 11.0 11.2 2.5 181 chr3L 11826536 intergenic CycA - chr3L 11826626 intergenic CycA - chr3L 11826717 intergenic CycA - chr3L_31_11825001 chr3L_11825001 D17-c3 1787 chr3L 11884139 11884175 chr3L 11884311 11884372 9 185 42.0 28.0 35.0 0.2 233 chr3L 11884139 intron CG44837 - chr3L 11884256 intron CG44837 - chr3L 11884372 intron CG44837 - chr3L_9_11880001 chr3L_11880001 D17-c3 1788 chr3L 11887233 11887288 chr3L 11887355 11887419 11 125 5.0 1.0 3.0 2.8 186 chr3L 11887233 intron CG44837 - chr3L 11887326 intron,3` UTR CG44837 -,CG5897 - chr3L 11887419 intron,3` UTR CG44837 -,CG5897 - chr3L_11_11885001 chr3L_11885001 D17-c3 1789 chr3L 11943474 11943521 chr3L 11943600 11943647 21 126 2.0 7.5 4.8 3.6 173 chr3L 11943474 3` UTR Rpt4R + chr3L 11943560 intergenic Rpt4R +,CG5883 - chr3L 11943647 3` UTR CG5883 - chr3L_21_11940001 chr3L_11940001 D17-c3 1790 chr3L 11961180 11961220 chr3L 11961305 11961336 61 124 29.0 27.5 28.2 2.1 156 chr3L 11961180 exon prc - chr3L 11961258 exon prc - chr3L 11961336 exon prc - chr3L_61_11960001 chr3L_11960001 D17-c3 1791 chr3L 11961955 11961960 chr3L 11964336 11964354 4 2391 65.5 39.5 52.5 0.1 2399 chr3L 11961955 exon prc - chr3L 11963154 exon prc - chr3L 11964354 intron prc - chr3L_4_11960001 chr3L_11960001 D17-c3 1792 chr3L 11961954 11961964 chr3L 11964272 11964283 4 2318 63.5 2.5 33.0 0.1 2329 chr3L 11961954 exon prc - chr3L 11963118 exon prc - chr3L 11964283 exon prc - chr3L_4_11960001 chr3L_11960001 D17-c3 1793 chr3L 11998312 11998344 chr3L 11998421 11998453 18 109 1.5 5.5 3.5 4.0 141 chr3L 11998312 intergenic Pop2 -,Grip163 - chr3L 11998382 intergenic Pop2 -,Grip163 - chr3L 11998453 3` UTR Pop2 - chr3L_18_11995001 chr3L_11995001 D17-c3 1794 chr3L 12013886 12013938 chr3L 12014002 12014054 33 116 7.5 12.0 9.8 3.1 168 chr3L 12013886 intron rols - chr3L 12013970 intron rols - chr3L 12014054 intron rols - chr3L_33_12010001 chr3L_12010001 D17-c3 1795 chr3L 12089055 12089112 chr3L 12089160 12089217 39 105 9.0 11.5 10.2 3.5 162 chr3L 12089055 exon CG17154 + chr3L 12089136 3` UTR CG17154 + chr3L 12089217 3` UTR CG17154 + chr3L_39_12085001 chr3L_12085001 D17-c3 1796 chr3L 12170766 12170819 chr3L 12170873 12170925 17 110 4.5 5.0 4.8 2.9 159 chr3L 12170766 intron Rh7 - chr3L 12170846 intron Rh7 - chr3L 12170925 intron Rh7 - chr3L_17_12170001 chr3L_12170001 D17-c3 1797 chr3L 12171268 12171315 chr3L 12171391 12171438 18 123 11.0 10.5 10.8 1.5 170 chr3L 12171268 intron Rh7 - chr3L 12171353 intron Rh7 - chr3L 12171438 intron Rh7 - chr3L_18_12170001 chr3L_12170001 D17-c3 1798 chr3L 12186344 12186400 chr3L 12186463 12186541 10 138 7.0 0.0 3.5 2.2 197 chr3L 12186344 intron CG6910 + chr3L 12186442 intron CG6910 + chr3L 12186541 exon CG6910 + chr3L_10_12185001 chr3L_12185001 D17-c3 1799 chr3L 12204359 12204419 chr3L 12204475 12204535 18 116 14.5 16.5 15.5 1.1 176 chr3L 12204359 3` UTR CG5626 - chr3L 12204447 intron CG5626 - chr3L 12204535 intron CG5626 - chr3L_18_12200001 chr3L_12200001 D17-c3 1800 chr3L 12223440 12223444 chr3L 12223542 12223546 5 102 20.0 29.0 24.5 0.2 106 chr3L 12223440 intron app - chr3L 12223493 intron app - chr3L 12223546 intron app - chr3L_5_12220001 chr3L_12220001 D17-c3 1801 chr3L 12223857 12223905 chr3L 12223959 12224004 11 99 31.5 37.5 34.5 0.3 147 chr3L 12223857 intron app - chr3L 12223930 intron app - chr3L 12224004 intron app - chr3L_11_12220001 chr3L_12220001 D17-c3 1802 chr3L 12229300 12229356 chr3L 12229425 12229481 32 120 9.0 9.5 9.2 3.1 181 chr3L 12229300 intron app - chr3L 12229390 intron app - chr3L 12229481 intron app - chr3L_32_12225001 chr3L_12225001 D17-c3 1803 chr3L 12297004 12297047 chr3L 12298592 12298635 20 1588 51.0 70.0 60.5 0.3 1631 chr3L 12297004 intergenic not near genes chr3L 12297820 intergenic not near genes chr3L 12298635 intergenic not near genes chr3L_20_12295001 chr3L_12295001 D17-c3 1804 chr3L 12356443 12356501 chr3L 12356619 12356678 27 176 5.5 10.5 8.0 3.0 235 chr3L 12356443 intergenic not near genes chr3L 12356560 intergenic not near genes chr3L 12356678 intergenic not near genes chr3L_27_12355001 chr3L_12355001 D17-c3 1805 chr3L 12369510 12369569 chr3L 12369625 12369684 25 115 6.0 4.5 5.2 4.0 174 chr3L 12369510 intron Ncc69 - chr3L 12369597 intron Ncc69 - chr3L 12369684 intron Ncc69 - chr3L_25_12365001 chr3L_12365001 D17-c3 1806 chr3L 12383854 12383907 chr3L 12383967 12384020 13 112 5.0 5.0 5.0 2.2 166 chr3L 12383854 intron Ncc69 - chr3L 12383937 intron Ncc69 - chr3L 12384020 intron Ncc69 - chr3L_13_12380001 chr3L_12380001 D17-c3 1807 chr3L 12398716 12398766 chr3L 12398837 12398892 25 126 4.5 10.5 7.5 2.9 176 chr3L 12398716 intron CG32104 - chr3L 12398804 exon CG32104 - chr3L 12398892 exon CG32104 - chr3L_25_12395001 chr3L_12395001 D17-c3 1808 chr3L 12446245 12446298 chr3L 12446348 12446358 36 95 7.5 7.5 7.5 4.2 113 chr3L 12446245 intergenic not near genes chr3L 12446302 intergenic not near genes chr3L 12446358 intergenic not near genes chr3L_36_12445001 chr3L_12445001 D17-c3 1809 chr3L 12458488 12458509 chr3L 12458601 12458633 5 118 3.0 6.5 4.8 0.9 145 chr3L 12458488 intergenic not near genes chr3L 12458560 intergenic not near genes chr3L 12458633 intergenic not near genes chr3L_5_12455001 chr3L_12455001 D17-c3 1810 chr3L 12491705 12491735 chr3L 12491786 12491843 11 98 0.0 9.5 4.8 1.9 138 chr3L 12491705 intergenic CG10657 -,CR45682 + chr3L 12491774 intergenic CG10657 -,CR45682 + chr3L 12491843 3` UTR,5` UTR CG10657 -,CR45682 + chr3L_11_12490001 chr3L_12490001 D17-c3 1811 chr3L 12539165 12539212 chr3L 12539274 12539321 20 109 11.0 6.0 8.5 2.1 156 chr3L 12539165 intron sowah - chr3L 12539243 intron sowah - chr3L 12539321 intron sowah - chr3L_20_12535001 chr3L_12535001 D17-c3 1812 chr3L 12578061 12578082 chr3L 12578174 12578195 9 113 2.5 0.0 1.2 4.1 134 chr3L 12578061 intergenic not near genes chr3L 12578128 intergenic not near genes chr3L 12578195 intergenic not near genes chr3L_9_12575001 chr3L_12575001 D17-c3 1813 chr3L 12591607 12591642 chr3L 12591709 12591739 28 100 18.5 21.0 19.8 1.3 132 chr3L 12591607 intron ara + chr3L 12591673 intron ara + chr3L 12591739 intron ara + chr3L_28_12590001 chr3L_12590001 D17-c3 1814 chr3L 12610970 12611027 chr3L 12611241 12611298 20 271 2.0 3.5 2.8 5.3 328 chr3L 12610970 intron caup + chr3L 12611134 intron caup + chr3L 12611298 intron caup + chr3L_20_12610001 chr3L_12610001 D17-c3 1815 chr3L 12620950 12620954 chr3L 12621073 12621077 5 123 40.5 16.0 28.2 0.2 127 chr3L 12620950 3` UTR caup + chr3L 12621014 3` UTR caup + chr3L 12621077 3` UTR caup + chr3L_5_12620001 chr3L_12620001 D17-c3 1816 chr3L 12620955 12620985 chr3L 12621072 12621100 16 120 28.0 16.0 22.0 0.7 145 chr3L 12620955 3` UTR caup + chr3L 12621028 3` UTR caup + chr3L 12621100 3` UTR caup + chr3L_16_12620001 chr3L_12620001 D17-c3 1817 chr3L 12626147 12626168 chr3L 12626280 12626302 10 134 6.5 0.0 3.2 2.4 155 chr3L 12626147 intergenic not near genes chr3L 12626224 intergenic not near genes chr3L 12626302 intergenic not near genes chr3L_10_12625001 chr3L_12625001 D17-c3 1818 chr3L 12631058 12631105 chr3L 12631161 12631213 27 107 11.0 7.0 9.0 2.7 155 chr3L 12631058 intron CR32111 + chr3L 12631136 intron CR32111 + chr3L 12631213 intron CR32111 + chr3L_27_12630001 chr3L_12630001 D17-c3 1819 chr3L 12631871 12631918 chr3L 12632105 12632153 18 235 6.5 10.5 8.5 1.9 282 chr3L 12631871 intron CR32111 + chr3L 12632012 intron CR32111 + chr3L 12632153 intron CR32111 + chr3L_18_12630001 chr3L_12630001 D17-c3 1820 chr3L 12657580 12657638 chr3L 12657686 12657746 14 108 7.5 6.5 7.0 1.8 166 chr3L 12657580 intergenic not near genes chr3L 12657663 intergenic not near genes chr3L 12657746 intergenic not near genes chr3L_14_12655001 chr3L_12655001 D17-c3 1821 chr3L 12799814 12799828 chr3L 12799947 12799961 11 133 16.5 15.0 15.8 0.7 147 chr3L 12799814 intron Atg1 - chr3L 12799888 intron Atg1 - chr3L 12799961 intron Atg1 - chr3L_11_12795001 chr3L_12795001 D17-c3 1822 chr3L 12801954 12802009 chr3L 12802055 12802110 24 100 5.5 6.5 6.0 3.4 156 chr3L 12801954 intron Atg1 - chr3L 12802032 intron Atg1 - chr3L 12802110 intron Atg1 - chr3L_24_12800001 chr3L_12800001 D17-c3 1823 chr3L 12829711 12829767 chr3L 12830537 12830597 20 829 12.0 4.0 8.0 2.2 886 chr3L 12829711 intron CG10960 - chr3L 12830154 intron CG10960 - chr3L 12830597 intron CG10960 - chr3L_20_12830001 chr3L_12830001 D17-c3 1824 chr3L 12857972 12858005 chr3L 12858092 12858125 14 120 9.5 0.5 5.0 2.3 153 chr3L 12857972 3` UTR CG32107 - chr3L 12858048 3` UTR CG32107 - chr3L 12858125 3` UTR CG32107 - chr3L_14_12855001 chr3L_12855001 D17-c3 1825 chr3L 12869524 12869569 chr3L 12869642 12869687 23 114 13.0 12.5 12.8 1.7 163 chr3L 12869524 intergenic not near genes chr3L 12869606 intergenic not near genes chr3L 12869687 intergenic not near genes chr3L_23_12865001 chr3L_12865001 D17-c3 1826 chr3L 12874900 12874954 chr3L 12877217 12877271 jockey 22 2317 8.0 4.0 6.0 3.1 2371 chr3L 12874900 intergenic not near genes chr3L 12876086 intergenic not near genes chr3L 12877271 intergenic not near genes chr3L_22_12875001 chr3L_12875001 D17-c3 1827 chr3L 12894787 12894812 chr3L 12894884 12894915 17 102 21.0 22.0 21.5 0.8 128 chr3L 12894787 intergenic CG14118 + chr3L 12894851 intergenic CG14118 + chr3L 12894915 intergenic CG14118 + chr3L_17_12890001 chr3L_12890001 D17-c3 1828 chr3L 12919260 12919296 chr3L 12924750 12924762 Rt1c 17 5494 17.0 13.0 15.0 1.1 5502 chr3L 12919260 intergenic not near genes chr3L 12922011 intergenic not near genes chr3L 12924762 intergenic not near genes chr3L_17_12920001 chr3L_12920001 D17-c3 1829 chr3L 12957115 12957171 chr3L 12957370 12957426 13 255 0.0 9.0 4.5 2.4 311 chr3L 12957115 intergenic not near genes chr3L 12957270 intergenic not near genes chr3L 12957426 intergenic not near genes chr3L_13_12955001 chr3L_12955001 D17-c3 1830 chr3L 12957771 12957814 chr3L 12962278 12962321 copia 29 4506 7.0 10.5 8.8 3.0 4550 chr3L 12957771 intergenic not near genes chr3L 12960046 intergenic not near genes chr3L 12962321 intergenic not near genes chr3L_29_12960001 chr3L_12960001 D17-c3 1831 chr3L 12966106 12966162 chr3L 12966220 12966276 20 113 8.5 4.5 6.5 2.7 170 chr3L 12966106 intron Or69a - chr3L 12966191 intron Or69a - chr3L 12966276 intron Or69a - chr3L_20_12965001 chr3L_12965001 D17-c3 1832 chr3L 12978496 12978792 chr3L 12978603 12978896 26 105 5.0 4.0 4.5 4.7 400 chr3L 12978496 intergenic not near genes chr3L 12978696 intergenic not near genes chr3L 12978896 intergenic not near genes chr3L_26_12975001 chr3L_12975001 D17-c3 1833 chr3L 12980496 12980553 chr3L 12980609 12980671 23 114 8.0 0.5 4.2 4.4 175 chr3L 12980496 intergenic not near genes chr3L 12980584 intergenic not near genes chr3L 12980671 intergenic not near genes chr3L_23_12980001 chr3L_12980001 D17-c3 1834 chr3L 13069533 13069589 chr3L 13069637 13069693 25 103 10.5 9.0 9.8 2.3 160 chr3L 13069533 intergenic not near genes chr3L 13069613 intergenic not near genes chr3L 13069693 intergenic not near genes chr3L_25_13065001 chr3L_13065001 D17-c3 1835 chr3L 13076938 13076990 chr3L 13077174 13077226 20 235 8.0 7.5 7.8 2.3 288 chr3L 13076938 intergenic not near genes chr3L 13077082 intergenic not near genes chr3L 13077226 intergenic not near genes chr3L_20_13075001 chr3L_13075001 D17-c3 1836 chr3L 13134494 13134537 chr3L 13134605 13134648 13 111 5.0 0.0 2.5 3.7 154 chr3L 13134494 intergenic not near genes chr3L 13134571 intergenic not near genes chr3L 13134648 intergenic not near genes chr3L_13_13130001 chr3L_13130001 D17-c3 1837 chr3L 13147365 13147405 chr3L 13147467 13147507 23 102 1.0 12.0 6.5 3.1 142 chr3L 13147365 intergenic not near genes chr3L 13147436 intergenic not near genes chr3L 13147507 intergenic not near genes chr3L_23_13145001 chr3L_13145001 D17-c3 1838 chr3L 13159265 13159297 chr3L 13159369 13159401 21 104 5.0 8.0 6.5 2.8 136 chr3L 13159265 intergenic not near genes chr3L 13159333 intergenic not near genes chr3L 13159401 intergenic not near genes chr3L_21_13155001 chr3L_13155001 D17-c3 1839 chr3L 13206212 13206265 chr3L 13206319 13206372 30 106 9.5 8.0 8.8 3.1 160 chr3L 13206212 intergenic not near genes chr3L 13206292 intergenic not near genes chr3L 13206372 intergenic not near genes chr3L_30_13205001 chr3L_13205001 D17-c3 1840 chr3L 13235738 13235777 chr3L 13235837 13235881 16 105 4.5 9.5 7.0 2.0 143 chr3L 13235738 intron caps + chr3L 13235810 intron caps + chr3L 13235881 intron caps + chr3L_16_13235001 chr3L_13235001 D17-c3 1841 chr3L 13296494 13296541 chr3L 13296610 13296657 19 116 11.0 3.5 7.2 2.3 163 chr3L 13296494 intergenic Sfp70A4 - chr3L 13296576 3` UTR Sfp70A4 - chr3L 13296657 3` UTR Sfp70A4 - chr3L_19_13295001 chr3L_13295001 D17-c3 1842 chr3L 13320583 13320609 chr3L 13320699 13320725 21 116 15.5 14.5 15.0 1.3 142 chr3L 13320583 intergenic not near genes chr3L 13320654 intergenic not near genes chr3L 13320725 intergenic not near genes chr3L_21_13320001 chr3L_13320001 D17-c3 1843 chr3L 13320610 13320641 chr3L 13320698 13320749 22 110 9.5 14.5 12.0 1.7 139 chr3L 13320610 intergenic not near genes chr3L 13320680 intergenic not near genes chr3L 13320749 intergenic not near genes chr3L_22_13320001 chr3L_13320001 D17-c3 1844 chr3L 13337144 13337157 chr3L 13337259 13337273 10 115 0.0 8.0 4.0 2.0 129 chr3L 13337144 intergenic not near genes chr3L 13337208 intergenic not near genes chr3L 13337273 intergenic not near genes chr3L_10_13335001 chr3L_13335001 D17-c3 1845 chr3L 13338259 13338292 chr3L 13338380 13338413 16 120 13.5 8.0 10.8 1.4 154 chr3L 13338259 intergenic not near genes chr3L 13338336 intergenic not near genes chr3L 13338413 intergenic not near genes chr3L_16_13335001 chr3L_13335001 D17-c3 1846 chr3L 13338293 13338303 chr3L 13338378 13338424 10 113 11.0 8.0 9.5 1.0 131 chr3L 13338293 intergenic not near genes chr3L 13338358 intergenic not near genes chr3L 13338424 intergenic not near genes chr3L_10_13335001 chr3L_13335001 D17-c3 1847 chr3L 13372925 13372972 chr3L 13373038 13373085 19 112 5.0 8.0 6.5 2.5 160 chr3L 13372925 intergenic not near genes chr3L 13373005 intergenic not near genes chr3L 13373085 intergenic not near genes chr3L_19_13370001 chr3L_13370001 D17-c3 1848 chr3L 13400516 13400546 chr3L 13400617 13400647 12 101 3.0 11.5 7.2 1.5 131 chr3L 13400516 intron sens - chr3L 13400582 intron sens - chr3L 13400647 intron sens - chr3L_12_13400001 chr3L_13400001 D17-c3 1849 chr3L 13452640 13452685 chr3L 13452753 13452798 24 113 1.0 9.5 5.2 3.9 158 chr3L 13452640 intron CG10738 + chr3L 13452719 intron CG10738 + chr3L 13452798 intron CG10738 + chr3L_24_13450001 chr3L_13450001 D17-c3 1850 chr3L 13525133 13525187 chr3L 13532954 13533008 roo 38 7821 9.0 15.0 12.0 2.9 7875 chr3L 13525133 intergenic not near genes chr3L 13529070 intergenic not near genes chr3L 13533008 intergenic not near genes chr3L_38_13525001 chr3L_13525001 D17-c3 1851 chr3L 13535881 13535930 chr3L 13535982 13536031 15 101 5.0 5.5 5.2 2.4 150 chr3L 13535881 intergenic not near genes chr3L 13535956 intergenic not near genes chr3L 13536031 intergenic not near genes chr3L_15_13535001 chr3L_13535001 D17-c3 1852 chr3L 13561996 13562008 chr3L 13562115 13562127 11 119 8.5 14.5 11.5 0.9 131 chr3L 13561996 intron bru-3 - chr3L 13562062 intron bru-3 - chr3L 13562127 intron bru-3 - chr3L_11_13560001 chr3L_13560001 D17-c3 1853 chr3L 13574605 13574619 chr3L 13580141 13580155 Rt1c 13 5536 27.0 19.5 23.2 0.5 5550 chr3L 13574605 intron bru-3 - chr3L 13577380 intron bru-3 - chr3L 13580155 intron bru-3 - chr3L_13_13575001 chr3L_13575001 D17-c3 1854 chr3L 13598192 13598216 chr3L 13598294 13598302 9 97 16.0 0.5 8.2 1.0 110 chr3L 13598192 intron bru-3 - chr3L 13598247 intron bru-3 - chr3L 13598302 intron bru-3 - chr3L_9_13595001 chr3L_13595001 D17-c3 1855 chr3L 13692150 13692157 chr3L 13692263 13692270 5 113 6.0 16.0 11.0 0.4 120 chr3L 13692150 intron bru-3 - chr3L 13692210 intron bru-3 - chr3L 13692270 intron bru-3 - chr3L_5_13690001 chr3L_13690001 D17-c3 1856 chr3L 13692560 13692620 chr3L 13692661 13692721 19 102 7.0 8.0 7.5 2.2 161 chr3L 13692560 intron bru-3 - chr3L 13692640 intron bru-3 - chr3L 13692721 intron bru-3 - chr3L_19_13690001 chr3L_13690001 D17-c3 1857 chr3L 13804524 13804570 chr3L 13822835 13822881 roo 29 18311 10.0 12.0 11.0 2.4 18357 chr3L 13804524 intergenic not near genes chr3L 13813702 intergenic not near genes chr3L 13822881 intergenic not near genes chr3L_29_13810001 chr3L_13810001 D17-c3 1858 chr3L 13828672 13828719 chr3L 13828773 13828820 21 101 8.5 11.0 9.8 1.9 148 chr3L 13828672 intergenic not near genes chr3L 13828746 intergenic not near genes chr3L 13828820 intergenic not near genes chr3L_21_13825001 chr3L_13825001 D17-c3 1859 chr3L 13833762 13833798 chr3L 13833924 13833958 7 161 4.0 6.5 5.2 1.1 196 chr3L 13833762 intergenic not near genes chr3L 13833860 intergenic not near genes chr3L 13833958 intergenic not near genes chr3L_7_13830001 chr3L_13830001 D17-c3 1860 chr3L 13868071 13868108 chr3L 13868232 13868269 13 161 11.0 6.5 8.8 1.3 198 chr3L 13868071 3` UTR dysc - chr3L 13868170 3` UTR dysc - chr3L 13868269 3` UTR dysc - chr3L_13_13865001 chr3L_13865001 D17-c3 1861 chr3L 13884355 13884387 chr3L 13884471 13884503 17 116 17.0 5.0 11.0 1.4 148 chr3L 13884355 intron dysc - chr3L 13884429 intron dysc - chr3L 13884503 intron dysc - chr3L_17_13880001 chr3L_13880001 D17-c3 1862 chr3L 13920394 13920432 chr3L 13920499 13920537 18 105 9.0 5.5 7.2 2.2 143 chr3L 13920394 intron Rgl - chr3L 13920466 intron Rgl - chr3L 13920537 intron Rgl - chr3L_18_13920001 chr3L_13920001 D17-c3 1863 chr3L 13921353 13921402 chr3L 13921459 13921508 11 106 9.0 9.5 9.2 1.1 155 chr3L 13921353 intron Rgl - chr3L 13921430 intron Rgl - chr3L 13921508 intron Rgl - chr3L_11_13920001 chr3L_13920001 D17-c3 1864 chr3L 13954449 13954451 chr3L 13954553 13954555 4 104 5.0 19.5 12.2 0.3 106 chr3L 13954449 intron CG32137 + chr3L 13954502 intron CG32137 + chr3L 13954555 intron CG32137 + chr3L_4_13950001 chr3L_13950001 D17-c3 1865 chr3L 14076054 14076097 chr3L 14076158 14076171 12 102 4.0 3.5 3.8 2.5 117 chr3L 14076054 3` UTR,intron Pex1 +,btl + chr3L 14076112 3` UTR,intron Pex1 +,btl + chr3L 14076171 intron btl + chr3L_12_14075001 chr3L_14075001 D17-c3 1866 chr3L 14089468 14089494 chr3L 14089590 14089616 9 122 10.0 1.0 5.5 1.4 148 chr3L 14089468 intergenic not near genes chr3L 14089542 intergenic not near genes chr3L 14089616 intergenic not near genes chr3L_9_14085001 chr3L_14085001 D17-c3 1867 chr3L 14180707 14180764 chr3L 14180808 14180865 22 101 5.0 6.0 5.5 3.4 158 chr3L 14180707 intergenic not near genes chr3L 14180786 intergenic not near genes chr3L 14180865 intergenic not near genes chr3L_22_14180001 chr3L_14180001 D17-c3 1868 chr3L 14236026 14236061 chr3L 14236188 14236223 16 161 11.0 4.0 7.5 1.9 197 chr3L 14236026 intergenic CG34244 - chr3L 14236124 intergenic CG34244 - chr3L 14236223 intergenic CG34244 -,CG7906 + chr3L_16_14235001 chr3L_14235001 D17-c3 1869 chr3L 14236747 14236751 chr3L 14236859 14236863 7 112 12.0 1.5 6.8 0.9 116 chr3L 14236747 5` UTR CG7906 + chr3L 14236805 intron CG7906 + chr3L 14236863 intron CG7906 + chr3L_7_14235001 chr3L_14235001 D17-c3 1870 chr3L 14239963 14240007 chr3L 14240085 14240129 17 120 5.0 8.0 6.5 2.3 166 chr3L 14239963 intergenic not near genes chr3L 14240046 intergenic not near genes chr3L 14240129 intergenic not near genes chr3L_17_14240001 chr3L_14240001 D17-c3 1871 chr3L 14245545 14245594 chr3L 14245664 14245713 1360 30 119 16.5 6.0 11.2 2.5 168 chr3L 14245545 3` UTR CR44561 - chr3L 14245629 3` UTR CR44561 - chr3L 14245713 intergenic CR44561 -,CR44560 + chr3L_30_14245001 chr3L_14245001 D17-c3 1872 chr3L 14267387 14267405 chr3L 14271824 14271842 F-element 11 4436 3.0 0.5 1.8 3.9 4455 chr3L 14267387 intergenic not near genes chr3L 14269614 intergenic not near genes chr3L 14271842 intergenic not near genes chr3L_11_14265001 chr3L_14265001 D17-c3 1873 chr3L 14282563 14282606 chr3L 14282668 14282711 31 104 14.0 20.0 17.0 1.7 148 chr3L 14282563 intron fz + chr3L 14282637 intron fz + chr3L 14282711 intron fz + chr3L_31_14280001 chr3L_14280001 D17-c3 1874 chr3L 14295961 14296014 chr3L 14296472 14296519 roo 44 510 19.5 17.0 18.2 2.3 558 chr3L 14295961 intron fz + chr3L 14296240 intron fz + chr3L 14296519 intron fz + chr3L_44_14295001 chr3L_14295001 D17-c3 1875 chr3L 14312009 14312055 chr3L 14316835 14316894 X-element 40 4826 10.5 10.0 10.2 3.6 4885 chr3L 14312009 exon fz + chr3L 14314452 intron fz + chr3L 14316894 intron fz + chr3L_40_14310001 chr3L_14310001 D17-c3 1876 chr3L 14338273 14338322 chr3L 14338394 14338443 13 121 0.5 3.0 1.8 4.6 170 chr3L 14338273 intron fz + chr3L 14338358 intron fz + chr3L 14338443 intron fz + chr3L_13_14335001 chr3L_14335001 D17-c3 1877 chr3L 14341418 14341438 chr3L 14341578 14341598 12 160 0.5 5.0 2.8 3.2 180 chr3L 14341418 intron fz + chr3L 14341508 intron fz + chr3L 14341598 intron fz + chr3L_12_14340001 chr3L_14340001 D17-c3 1878 chr3L 14356496 14356548 chr3L 14356601 14356653 25 105 14.0 16.5 15.2 1.5 157 chr3L 14356496 intron fz + chr3L 14356574 intron fz + chr3L 14356653 intron fz + chr3L_25_14355001 chr3L_14355001 D17-c3 1879 chr3L 14408989 14409019 chr3L 14409112 14409142 6 123 21.5 11.5 16.5 0.3 153 chr3L 14408989 intron stwl - chr3L 14409066 intron stwl - chr3L 14409142 intron stwl - chr3L_6_14405001 chr3L_14405001 D17-c3 1880 chr3L 14411843 14411899 chr3L 14411947 14412003 19 104 21.5 18.5 20.0 0.9 160 chr3L 14411843 intron CG3919 + chr3L 14411923 intron CG3919 + chr3L 14412003 intron CG3919 + chr3L_19_14410001 chr3L_14410001 D17-c3 1881 chr3L 14425652 14425705 chr3L 14425762 14425815 8 110 21.0 22.0 21.5 0.4 163 chr3L 14425652 intron bbg - chr3L 14425734 intron bbg - chr3L 14425815 intron bbg - chr3L_8_14425001 chr3L_14425001 D17-c3 1882 chr3L 14439187 14439247 chr3L 14439375 14439399 16 182 10.5 7.0 8.8 1.6 212 chr3L 14439187 intron bbg - chr3L 14439293 intron bbg - chr3L 14439399 intron bbg - chr3L_16_14435001 chr3L_14435001 D17-c3 1883 chr3L 14467100 14467154 chr3L 14467213 14467267 15 111 24.5 25.5 25.0 0.6 167 chr3L 14467100 intron bbg - chr3L 14467184 intron bbg - chr3L 14467267 intron bbg - chr3L_15_14465001 chr3L_14465001 D17-c3 1884 chr3L 14468436 14468475 chr3L 14473656 14473706 copia 22 5230 6.0 11.0 8.5 2.3 5270 chr3L 14468436 intron bbg - chr3L 14471071 intron bbg - chr3L 14473706 intron bbg - chr3L_22_14470001 chr3L_14470001 D17-c3 1885 chr3L 14473866 14473878 chr3L 14473968 14473975 8 101 40.5 31.5 36.0 0.2 109 chr3L 14473866 intron bbg - chr3L 14473920 intron bbg - chr3L 14473975 intron bbg - chr3L_8_14470001 chr3L_14470001 D17-c3 1886 chr3L 14485992 14486044 chr3L 14486098 14486150 17 106 14.5 16.5 15.5 1.0 158 chr3L 14485992 intron bbg - chr3L 14486071 intron bbg - chr3L 14486150 intron bbg - chr3L_17_14485001 chr3L_14485001 D17-c3 1887 chr3L 14522083 14522123 chr3L 14522207 14522247 7 124 19.0 22.5 20.8 0.3 164 chr3L 14522083 intron bbg - chr3L 14522165 intron bbg - chr3L 14522247 intron bbg - chr3L_7_14520001 chr3L_14520001 D17-c3 1888 chr3L 14546803 14546817 chr3L 14546929 14546943 10 126 0.0 14.5 7.2 1.2 140 chr3L 14546803 intron CG9238 - chr3L 14546873 intron CG9238 - chr3L 14546943 intron CG9238 - chr3L_10_14545001 chr3L_14545001 D17-c3 1889 chr3L 14565721 14565771 chr3L 14565837 14565887 17 116 11.5 11.5 11.5 1.4 166 chr3L 14565721 intergenic not near genes chr3L 14565804 intergenic not near genes chr3L 14565887 intergenic not near genes chr3L_17_14565001 chr3L_14565001 D17-c3 1890 chr3L 14578406 14578438 chr3L 14578561 14578593 10 154 14.0 10.5 12.2 0.8 187 chr3L 14578406 intergenic not near genes chr3L 14578500 intergenic not near genes chr3L 14578593 intergenic not near genes chr3L_10_14575001 chr3L_14575001 D17-c3 1891 chr3L 14591049 14591108 chr3L 14591155 14591201 22 102 35.0 29.0 32.0 0.7 152 chr3L 14591049 intron HGTX - chr3L 14591125 intron HGTX - chr3L 14591201 intron HGTX - chr3L_22_14590001 chr3L_14590001 D17-c3 1892 chr3L 14594004 14594056 chr3L 14594119 14594171 14 115 10.0 10.0 10.0 1.3 167 chr3L 14594004 intron HGTX - chr3L 14594088 intron HGTX - chr3L 14594171 intron HGTX - chr3L_14_14590001 chr3L_14590001 D17-c3 1893 chr3L 14602955 14603069 chr3L 14603068 14603171 5 113 1.5 1.0 1.2 2.3 216 chr3L 14602955 intergenic not near genes chr3L 14603063 intergenic not near genes chr3L 14603171 intergenic not near genes chr3L_5_14600001 chr3L_14600001 D17-c3 1894 chr3L 14618381 14618424 chr3L 14618621 14618664 20 239 13.5 7.5 10.5 1.7 283 chr3L 14618381 intron shd + chr3L 14618522 intron shd + chr3L 14618664 intron shd + chr3L_20_14615001 chr3L_14615001 D17-c3 1895 chr3L 14635680 14635731 chr3L 14635784 14635835 12 104 35.0 34.0 34.5 0.3 155 chr3L 14635680 intron dlp + chr3L 14635758 intron dlp + chr3L 14635835 intron dlp + chr3L_12_14635001 chr3L_14635001 D17-c3 1896 chr3L 14721168 14721208 chr3L 14723031 14723076 Rt1c 27 1867 14.0 10.0 12.0 2.1 1908 chr3L 14721168 intron ome + chr3L 14722122 intron ome + chr3L 14723076 intron ome + chr3L_27_14720001 chr3L_14720001 D17-c3 1897 chr3L 14724809 14724835 chr3L 14724917 14724944 7 109 25.0 25.0 25.0 0.3 135 chr3L 14724809 intron ome + chr3L 14724876 intron ome + chr3L 14724944 intron ome + chr3L_7_14720001 chr3L_14720001 D17-c3 1898 chr3L 14725546 14725623 chr3L 14728584 14728642 Doc 16 3021 0.5 10.0 5.2 2.6 3096 chr3L 14725546 intron ome + chr3L 14727094 intron ome + chr3L 14728642 intron ome + chr3L_16_14725001 chr3L_14725001 D17-c3 1899 chr3L 14729498 14729672 chr3L 14729636 14729773 11 124 8.0 4.5 6.2 1.5 275 chr3L 14729498 intron ome + chr3L 14729636 intron ome + chr3L 14729773 intron ome + chr3L_11_14725001 chr3L_14725001 D17-c3 1900 chr3L 14731290 14731347 chr3L 14731733 14731790 27 442 30.5 24.0 27.2 1.0 500 chr3L 14731290 intron ome + chr3L 14731540 intron ome + chr3L 14731790 intron ome + chr3L_27_14730001 chr3L_14730001 D17-c3 1901 chr3L 14731770 14731809 chr3L 14732294 14732308 9 514 26.5 11.5 19.0 0.5 538 chr3L 14731770 intron ome + chr3L 14732039 intron ome + chr3L 14732308 intron ome + chr3L_9_14730001 chr3L_14730001 D17-c3 1902 chr3L 14731812 14731819 chr3L 14732291 14732325 7 507 24.5 11.5 18.0 0.4 513 chr3L 14731812 intron ome + chr3L 14732068 intron ome + chr3L 14732325 intron ome + chr3L_7_14730001 chr3L_14730001 D17-c3 1903 chr3L 14740887 14741153 chr3L 14741000 14741249 6 111 34.5 26.0 30.2 0.2 362 chr3L 14740887 intron ome + chr3L 14741068 intron ome + chr3L 14741249 intron ome + chr3L_6_14740001 chr3L_14740001 D17-c3 1904 chr3L 14825136 14825159 chr3L 14832888 14832911 Stalker2 4 7752 1.0 12.5 6.8 0.5 7775 chr3L 14825136 intron CG17839 + chr3L 14829024 intron CG17839 + chr3L 14832911 intron CG17839 + chr3L_4_14825001 chr3L_14825001 D17-c3 1905 chr3L 14836647 14836677 chr3L 14836743 14836778 5 100 21.0 14.0 17.5 0.3 131 chr3L 14836647 intron CG17839 + chr3L 14836712 intron CG17839 + chr3L 14836778 intron CG17839 + chr3L_5_14835001 chr3L_14835001 D17-c3 1906 chr3L 14839016 14839048 chr3L 14839130 14839162 6 114 4.0 7.5 5.8 0.9 146 chr3L 14839016 intron CG17839 + chr3L 14839089 intron CG17839 + chr3L 14839162 intron CG17839 + chr3L_6_14835001 chr3L_14835001 D17-c3 1907 chr3L 14861783 14861833 chr3L 14861888 14861938 13 105 11.5 15.0 13.2 0.9 155 chr3L 14861783 intron CG17839 + chr3L 14861860 intron CG17839 + chr3L 14861938 intron CG17839 + chr3L_13_14860001 chr3L_14860001 D17-c3 1908 chr3L 14866803 14866836 chr3L 14866919 14866952 12 116 28.0 28.0 28.0 0.4 149 chr3L 14866803 exon CG17839 + chr3L 14866878 intron CG17839 + chr3L 14866952 intron CG17839 + chr3L_12_14865001 chr3L_14865001 D17-c3 1909 chr3L 14913879 14914148 chr3L 14913981 14914266 15 105 18.5 24.5 21.5 0.7 387 chr3L 14913879 intron DCX-EMAP + chr3L 14914072 intron DCX-EMAP + chr3L 14914266 intron DCX-EMAP + chr3L_15_14910001 chr3L_14910001 D17-c3 1910 chr3L 14917641 14917690 chr3L 14917749 14917798 19 106 47.5 49.0 48.2 0.4 157 chr3L 14917641 intron DCX-EMAP + chr3L 14917720 intron DCX-EMAP + chr3L 14917798 intron DCX-EMAP + chr3L_19_14915001 chr3L_14915001 D17-c3 1911 chr3L 14921082 14921111 chr3L 14921198 14921227 18 116 21.5 16.0 18.8 0.9 145 chr3L 14921082 intron DCX-EMAP + chr3L 14921154 intron DCX-EMAP + chr3L 14921227 intron DCX-EMAP + chr3L_18_14920001 chr3L_14920001 D17-c3 1912 chr3L 14922085 14922134 chr3L 14922213 14922267 16 128 10.0 5.5 7.8 1.8 182 chr3L 14922085 intron DCX-EMAP + chr3L 14922176 intron DCX-EMAP + chr3L 14922267 intron DCX-EMAP + chr3L_16_14920001 chr3L_14920001 D17-c3 1913 chr3L 14933421 14933458 chr3L 14933528 14933565 11 107 7.0 13.5 10.2 1.0 144 chr3L 14933421 intron DCX-EMAP + chr3L 14933493 intron DCX-EMAP + chr3L 14933565 intron DCX-EMAP + chr3L_11_14930001 chr3L_14930001 D17-c3 1914 chr3L 14954360 14954397 chr3L 14956054 14956091 transib2 8 1694 14.0 22.5 18.2 0.4 1731 chr3L 14954360 intergenic not near genes chr3L 14955226 intergenic not near genes chr3L 14956091 intergenic not near genes chr3L_8_14955001 chr3L_14955001 D17-c3 1915 chr3L 14962234 14962282 chr3L 14962560 14962602 9 325 18.0 13.5 15.8 0.5 368 chr3L 14962234 intergenic not near genes chr3L 14962418 intergenic not near genes chr3L 14962602 intergenic not near genes chr3L_9_14960001 chr3L_14960001 D17-c3 1916 chr3L 14970737 14970765 chr3L 14971072 14971100 F-element 9 335 6.5 2.5 4.5 1.6 363 chr3L 14970737 intergenic Tom + chr3L 14970918 intergenic not near genes chr3L 14971100 intergenic not near genes chr3L_9_14970001 chr3L_14970001 D17-c3 1917 chr3L 15069790 15069814 chr3L 15069931 15069935 56 145 52.0 125.0 88.5 0.6 145 chr3L 15069790 exon cp309 - chr3L 15069862 intron cp309 - chr3L 15069935 exon cp309 - chr3L_56_15065001 chr3L_15065001 D17-c3 1918 chr3L 15085031 15085076 chr3L 15086222 15086267 1360 16 1187 4.5 8.5 6.5 2.1 1236 chr3L 15085031 intron cp309 - chr3L 15085649 intron cp309 - chr3L 15086267 intron cp309 - chr3L_16_15085001 chr3L_15085001 D17-c3 1919 chr3L 15094952 15094963 chr3L 15095073 15095084 4 121 5.5 9.0 7.2 0.5 132 chr3L 15094952 intergenic Aats-gly +,cp309 -,CG6945 - chr3L 15095018 intergenic Aats-gly +,cp309 -,CG6945 - chr3L 15095084 intergenic Aats-gly +,cp309 -,CG6945 - chr3L_4_15095001 chr3L_15095001 D17-c3 1920 chr3L 15146139 15146172 chr3L 15146241 15146286 7 107 0.0 6.0 3.0 1.8 147 chr3L 15146139 3` UTR Pex3 + chr3L 15146212 3` UTR Pex3 + chr3L 15146286 3` UTR Pex3 + chr3L_7_15145001 chr3L_15145001 D17-c3 1921 chr3L 15151194 15151240 chr3L 15151403 15151449 12 209 11.5 15.0 13.2 0.8 255 chr3L 15151194 intron FucTA + chr3L 15151322 intron FucTA + chr3L 15151449 intron FucTA + chr3L_12_15150001 chr3L_15150001 D17-c3 1922 chr3L 15164998 15165040 chr3L 15165121 15165164 6 124 2.0 0.0 1.0 3.0 166 chr3L 15164998 intergenic not near genes chr3L 15165081 intergenic not near genes chr3L 15165164 intergenic not near genes chr3L_6_15165001 chr3L_15165001 D17-c3 1923 chr3L 15209051 15209095 chr3L 15209162 15209206 10 111 5.5 3.0 4.2 1.9 155 chr3L 15209051 intergenic CG6888 + chr3L 15209128 intergenic not near genes chr3L 15209206 intergenic not near genes chr3L_10_15205001 chr3L_15205001 D17-c3 1924 chr3L 15219720 15219772 chr3L 15219827 15219880 14 107 14.0 14.5 14.2 0.9 160 chr3L 15219720 intergenic not near genes chr3L 15219800 intergenic not near genes chr3L 15219880 intergenic not near genes chr3L_14_15215001 chr3L_15215001 D17-c3 1925 chr3L 15257409 15257451 chr3L 15257647 15257689 14 234 5.5 3.0 4.2 2.7 280 chr3L 15257409 intergenic not near genes chr3L 15257549 intergenic not near genes chr3L 15257689 intergenic not near genes chr3L_14_15255001 chr3L_15255001 D17-c3 1926 chr3L 15295746 15295800 chr3L 15298614 15298668 gypsy5 18 2868 6.0 5.0 5.5 2.8 2922 chr3L 15295746 intergenic not near genes chr3L 15297207 intergenic not near genes chr3L 15298668 intergenic Best4 + chr3L_18_15295001 chr3L_15295001 D17-c3 1927 chr3L 15333127 15333169 chr3L 15333232 15333276 5 104 17.5 28.0 22.8 0.2 149 chr3L 15333127 intergenic CR43247 + chr3L 15333202 intergenic CR43247 + chr3L 15333276 intergenic CR43247 + chr3L_5_15330001 chr3L_15330001 D17-c3 1928 chr3L 15384932 15384988 chr3L 15385085 15385141 26 149 20.0 20.0 20.0 1.2 209 chr3L 15384932 intergenic not near genes chr3L 15385036 intergenic not near genes chr3L 15385141 intergenic not near genes chr3L_26_15385001 chr3L_15385001 D17-c3 1929 chr3L 15406003 15406044 chr3L 15406110 15406152 6 107 13.5 18.5 16.0 0.4 149 chr3L 15406003 intergenic not near genes chr3L 15406078 intergenic not near genes chr3L 15406152 intergenic not near genes chr3L_6_15405001 chr3L_15405001 D17-c3 1930 chr3L 15423738 15423784 chr3L 15426607 15426653 opus 22 2869 7.0 4.5 5.8 3.2 2915 chr3L 15423738 intergenic not near genes chr3L 15425196 intergenic not near genes chr3L 15426653 intergenic not near genes chr3L_22_15425001 chr3L_15425001 D17-c3 1931 chr3L 15436065 15436118 chr3L 15436205 15436258 24 140 14.5 16.0 15.2 1.5 193 chr3L 15436065 intergenic not near genes chr3L 15436162 intergenic not near genes chr3L 15436258 intergenic not near genes chr3L_24_15435001 chr3L_15435001 D17-c3 1932 chr3L 15443561 15443615 chr3L 15443662 15443717 8 101 7.5 10.0 8.8 0.8 156 chr3L 15443561 intergenic not near genes chr3L 15443639 intergenic not near genes chr3L 15443717 intergenic not near genes chr3L_8_15440001 chr3L_15440001 D17-c3 1933 chr3L 15466012 15466137 chr3L 15466119 15466258 11 113 12.0 14.5 13.2 0.8 246 chr3L 15466012 intergenic not near genes chr3L 15466135 intergenic not near genes chr3L 15466258 intergenic not near genes chr3L_11_15465001 chr3L_15465001 D17-c3 1934 chr3L 15474666 15474688 chr3L 15474830 15474849 6 164 14.5 17.5 16.0 0.4 183 chr3L 15474666 intergenic not near genes chr3L 15474758 intergenic not near genes chr3L 15474849 intergenic not near genes chr3L_6_15470001 chr3L_15470001 D17-c3 1935 chr3L 15478107 15478150 chr3L 15478302 15478345 6 195 14.0 20.5 17.2 0.3 238 chr3L 15478107 intergenic not near genes chr3L 15478226 intergenic not near genes chr3L 15478345 intergenic not near genes chr3L_6_15475001 chr3L_15475001 D17-c3 1936 chr3L 15482304 15482344 chr3L 15482431 15482471 5 127 26.5 21.0 23.8 0.2 167 chr3L 15482304 intergenic not near genes chr3L 15482388 intergenic not near genes chr3L 15482471 intergenic not near genes chr3L_5_15480001 chr3L_15480001 D17-c3 1937 chr3L 15540917 15540922 chr3L 15541027 15541035 4 112 18.0 17.0 17.5 0.2 118 chr3L 15540917 intron CrebA + chr3L 15540976 intron CrebA + chr3L 15541035 intron CrebA + chr3L_4_15540001 chr3L_15540001 D17-c3 1938 chr3L 15541594 15541647 chr3L 15541710 15541763 20 116 10.0 5.0 7.5 2.4 169 chr3L 15541594 intron CrebA + chr3L 15541678 intron CrebA + chr3L 15541763 intron CrebA + chr3L_20_15540001 chr3L_15540001 D17-c3 1939 chr3L 15554899 15554946 chr3L 15556711 15556758 S-element 22 1812 4.0 11.0 7.5 2.6 1859 chr3L 15554899 intron AGO2 + chr3L 15555828 intron AGO2 + chr3L 15556758 intron AGO2 + chr3L_22_15555001 chr3L_15555001 D17-c3 1940 chr3L 15591597 15591652 chr3L 15591777 15591832 10 179 13.5 11.5 12.5 0.7 235 chr3L 15591597 intron RhoGAP71E + chr3L 15591714 intron RhoGAP71E + chr3L 15591832 intron RhoGAP71E + chr3L_10_15590001 chr3L_15590001 D17-c3 1941 chr3L 15600143 15600197 chr3L 15600253 15600323 13 123 8.5 0.0 4.2 2.5 180 chr3L 15600143 intron RhoGAP71E + chr3L 15600233 intron RhoGAP71E + chr3L 15600323 intron RhoGAP71E + chr3L_13_15600001 chr3L_15600001 D17-c3 1942 chr3L 15633160 15633201 chr3L 15633265 15633306 6 104 3.5 2.0 2.8 1.6 146 chr3L 15633160 intron comm3 - chr3L 15633233 intron comm3 - chr3L 15633306 intron comm3 - chr3L_6_15630001 chr3L_15630001 D17-c3 1943 chr3L 15641782 15641814 chr3L 15641892 15641924 11 110 0.0 6.5 3.2 2.6 142 chr3L 15641782 intron comm3 - chr3L 15641853 intron comm3 - chr3L 15641924 intron comm3 - chr3L_11_15640001 chr3L_15640001 D17-c3 1944 chr3L 15679365 15679407 chr3L 15679550 15679592 5 185 11.5 9.0 10.2 0.4 227 chr3L 15679365 intergenic CG7304 + chr3L 15679478 intergenic CG7304 + chr3L 15679592 intergenic CG7304 + chr3L_5_15675001 chr3L_15675001 D17-c3 1945 chr3L 15691393 15691447 chr3L 15691498 15691503 12 100 8.0 11.5 9.8 1.1 110 chr3L 15691393 intron CG34451 - chr3L 15691448 intron CG34451 - chr3L 15691503 intron CG34451 - chr3L_12_15690001 chr3L_15690001 D17-c3 1946 chr3L 15742935 15742951 chr3L 15743121 15743127 4 181 31.0 14.0 22.5 0.2 192 chr3L 15742935 intergenic not near genes chr3L 15743031 intergenic not near genes chr3L 15743127 intergenic not near genes chr3L_4_15740001 chr3L_15740001 D17-c3 1947 chr3L 15756857 15756907 chr3L 15756965 15756985 14 106 15.5 9.5 12.5 1.0 128 chr3L 15756857 intergenic not near genes chr3L 15756921 intergenic not near genes chr3L 15756985 intergenic not near genes chr3L_14_15755001 chr3L_15755001 D17-c3 1948 chr3L 15769397 15769440 chr3L 15769503 15769546 6 105 11.5 20.0 15.8 0.4 149 chr3L 15769397 intergenic not near genes chr3L 15769472 intergenic not near genes chr3L 15769546 intergenic not near genes chr3L_6_15765001 chr3L_15765001 D17-c3 1949 chr3L 15778498 15778543 chr3L 15778674 15778719 5 176 9.0 12.0 10.5 0.4 221 chr3L 15778498 intergenic not near genes chr3L 15778608 intergenic not near genes chr3L 15778719 intergenic not near genes chr3L_5_15775001 chr3L_15775001 D17-c3 1950 chr3L 15833804 15833852 chr3L 15834018 15834066 8 216 29.0 27.0 28.0 0.3 262 chr3L 15833804 3` UTR,3` UTR CG12713 +,CG18081 - chr3L 15833935 3` UTR,3` UTR CG12713 +,CG18081 - chr3L 15834066 3` UTR CG18081 - chr3L_8_15830001 chr3L_15830001 D17-c3 1951 chr3L 15840411 15840469 chr3L 15840524 15840579 9 109 3.5 6.5 5.0 1.5 168 chr3L 15840411 intron CG32150 - chr3L 15840495 intron CG32150 - chr3L 15840579 intron CG32150 - chr3L_9_15840001 chr3L_15840001 D17-c3 1952 chr3L 15883182 15883217 chr3L 15883500 15883535 8 313 12.5 16.0 14.2 0.5 353 chr3L 15883182 intron pHCl - chr3L 15883358 intron pHCl - chr3L 15883535 intron pHCl - chr3L_8_15880001 chr3L_15880001 D17-c3 1953 chr3L 15887264 15887301 chr3L 15887365 15887402 4 101 7.5 7.5 7.5 0.5 138 chr3L 15887264 intron pHCl - chr3L 15887333 intron pHCl - chr3L 15887402 intron pHCl - chr3L_4_15885001 chr3L_15885001 D17-c3 1954 chr3L 15889048 15889096 chr3L 15889271 15889319 9 221 14.0 8.5 11.2 0.7 271 chr3L 15889048 intron pHCl - chr3L 15889184 intron pHCl - chr3L 15889319 intron pHCl - chr3L_9_15885001 chr3L_15885001 D17-c3 1955 chr3L 15897042 15897077 chr3L 15897188 15897223 14 146 31.5 20.0 25.8 0.5 181 chr3L 15897042 intron pHCl - chr3L 15897132 intron pHCl - chr3L 15897223 intron pHCl - chr3L_14_15895001 chr3L_15895001 D17-c3 1956 chr3L 15899202 15899222 chr3L 15899794 15899812 jockey 9 590 15.0 5.0 10.0 0.8 610 chr3L 15899202 intergenic pHCl - chr3L 15899507 intergenic pHCl - chr3L 15899812 intergenic sff - chr3L_9_15895001 chr3L_15895001 D17-c3 1957 chr3L 15899225 15899258 chr3L 15899793 15899845 jockey 27 587 8.0 4.5 6.2 3.8 620 chr3L 15899225 intergenic pHCl - chr3L 15899535 intergenic not near genes chr3L 15899845 intergenic sff - chr3L_27_15895001 chr3L_15895001 D17-c3 1958 chr3L 15939826 15939880 chr3L 15939927 15939981 16 101 19.0 19.0 19.0 0.8 155 chr3L 15939826 intron Pka-C3 - chr3L 15939904 intron Pka-C3 - chr3L 15939981 intron Pka-C3 - chr3L_16_15935001 chr3L_15935001 D17-c3 1959 chr3L 15942187 15942221 chr3L 15942288 15942322 9 101 8.0 11.5 9.8 0.8 135 chr3L 15942187 intron Pka-C3 - chr3L 15942254 intron Pka-C3 - chr3L 15942322 intron Pka-C3 - chr3L_9_15940001 chr3L_15940001 D17-c3 1960 chr3L 15968204 15968245 chr3L 15968303 15968312 17 98 27.5 30.0 28.8 0.6 108 chr3L 15968204 5` UTR CG10516 + chr3L 15968258 5` UTR CG10516 + chr3L 15968312 5` UTR CG10516 + chr3L_17_15965001 chr3L_15965001 D17-c3 1961 chr3L 15989212 15989227 chr3L 15989320 15989335 10 108 7.0 6.5 6.8 1.3 123 chr3L 15989212 intron Hip14 + chr3L 15989274 intron Hip14 + chr3L 15989335 intron Hip14 + chr3L_10_15985001 chr3L_15985001 D17-c3 1962 chr3L 15991489 15991526 chr3L 15991606 15991645 13 119 13.5 12.5 13.0 0.9 156 chr3L 15991489 3` UTR Hip14 + chr3L 15991567 3` UTR Hip14 + chr3L 15991645 3` UTR Hip14 + chr3L_13_15990001 chr3L_15990001 D17-c3 1963 chr3L 16027219 16027274 chr3L 16027332 16027372 24 111 7.0 6.0 6.5 3.2 153 chr3L 16027219 intron Notum + chr3L 16027296 intron Notum + chr3L 16027372 intron Notum + chr3L_24_16025001 chr3L_16025001 D17-c3 1964 chr3L 16040370 16040406 chr3L 16040489 16040525 5 119 14.5 13.0 13.8 0.3 155 chr3L 16040370 intron th - chr3L 16040448 intron th - chr3L 16040525 intron th - chr3L_5_16040001 chr3L_16040001 D17-c3 1965 chr3L 16070732 16070748 chr3L 16070834 16070850 5 102 21.5 23.5 22.5 0.2 118 chr3L 16070732 intron Mbs + chr3L 16070791 intron Mbs + chr3L 16070850 exon Mbs + chr3L_5_16070001 chr3L_16070001 D17-c3 1966 chr3L 16072298 16072350 chr3L 16072405 16072457 9 107 13.5 15.5 14.5 0.6 159 chr3L 16072298 intron Mbs + chr3L 16072378 intron Mbs + chr3L 16072457 intron Mbs + chr3L_9_16070001 chr3L_16070001 D17-c3 1967 chr3L 16158805 16158828 chr3L 16158902 16158938 6 108 13.0 14.0 13.5 0.4 133 chr3L 16158805 intron CG5151 - chr3L 16158872 intron CG5151 - chr3L 16158938 intron CG5151 - chr3L_6_16155001 chr3L_16155001 D17-c3 1968 chr3L 16162607 16162626 chr3L 16162716 16162735 4 109 10.5 11.5 11.0 0.3 128 chr3L 16162607 intron CG5151 - chr3L 16162671 intron CG5151 - chr3L 16162735 intron CG5151 - chr3L_4_16160001 chr3L_16160001 D17-c3 1969 chr3L 16180330 16180358 chr3L 16180457 16180485 5 126 14.5 14.0 14.2 0.3 155 chr3L 16180330 intergenic not near genes chr3L 16180408 intergenic not near genes chr3L 16180485 intergenic not near genes chr3L_5_16180001 chr3L_16180001 D17-c3 1970 chr3L 16184088 16184133 chr3L 16188932 16188977 X-element 20 4844 5.0 13.5 9.2 2.0 4889 chr3L 16184088 intergenic not near genes chr3L 16186532 intergenic not near genes chr3L 16188977 intergenic not near genes chr3L_20_16185001 chr3L_16185001 D17-c3 1971 chr3L 16206756 16206785 chr3L 16206859 16206888 9 103 8.5 1.0 4.8 1.6 132 chr3L 16206756 intergenic not near genes chr3L 16206822 intergenic not near genes chr3L 16206888 intergenic not near genes chr3L_9_16205001 chr3L_16205001 D17-c3 1972 chr3L 16212792 16212833 chr3L 16212908 16212949 13 115 6.5 1.0 3.8 2.7 157 chr3L 16212792 intergenic CG13073 - chr3L 16212870 intergenic CG13073 - chr3L 16212949 intergenic CG13073 - chr3L_13_16210001 chr3L_16210001 D17-c3 1973 chr3L 16304852 16304879 chr3L 16304944 16304982 6 101 15.5 10.5 13.0 0.4 130 chr3L 16304852 intergenic CG43249 +,CG13043 - chr3L 16304917 intergenic CG43249 +,CG13043 - chr3L 16304982 intergenic CG13043 -,CG43249 + chr3L_6_16300001 chr3L_16300001 D17-c3 1974 chr3L 16311220 16311255 chr3L 16311343 16311378 4 123 13.0 11.5 12.2 0.3 158 chr3L 16311220 5` UTR CR32160 + chr3L 16311299 5` UTR CR32160 + chr3L 16311378 intergenic CR32160 + chr3L_4_16310001 chr3L_16310001 D17-c3 1975 chr3L 16340238 16340287 chr3L 16340387 16340434 19 148 22.5 23.0 22.8 0.8 196 chr3L 16340238 intron CG4998 + chr3L 16340336 intron CG4998 + chr3L 16340434 intron CG4998 + chr3L_19_16340001 chr3L_16340001 D17-c3 1976 chr3L 16360859 16360916 chr3L 16360962 16361014 15 102 13.0 16.0 14.5 1.0 155 chr3L 16360859 intron CG45057 - chr3L 16360936 intron CG45057 - chr3L 16361014 intron CG45057 - chr3L_15_16360001 chr3L_16360001 D17-c3 1977 chr3L 16366761 16366799 chr3L 16366919 16366967 19 163 8.0 9.0 8.5 2.0 206 chr3L 16366761 exon Cpr72Ec - chr3L 16366864 exon Cpr72Ec - chr3L 16366967 exon Cpr72Ec - chr3L_19_16365001 chr3L_16365001 D17-c3 1978 chr3L 16443823 16443878 chr3L 16446188 16446243 Doc 22 2364 5.5 6.5 6.0 3.1 2420 chr3L 16443823 intron,intron CG33158 +,dsx-c73A - chr3L 16445033 intron,intron CG33158 +,dsx-c73A - chr3L 16446243 intron,intron CG33158 +,dsx-c73A - chr3L_22_16445001 chr3L_16445001 D17-c3 1979 chr3L 16457531 16457541 chr3L 16457651 16457661 5 120 21.0 21.5 21.2 0.2 130 chr3L 16457531 intron CG33158 + chr3L 16457596 intron CG33158 + chr3L 16457661 intron CG33158 + chr3L_5_16455001 chr3L_16455001 D17-c3 1980 chr3L 16465775 16465820 chr3L 16465935 16465981 7 160 15.0 9.0 12.0 0.5 206 chr3L 16465775 intron CG33158 + chr3L 16465878 intron CG33158 + chr3L 16465981 intron CG33158 + chr3L_7_16465001 chr3L_16465001 D17-c3 1981 chr3L 16485590 16485639 chr3L 16485698 16485752 23 111 26.0 26.5 26.2 0.8 162 chr3L 16485590 exon CG33158 + chr3L 16485671 intron CG33158 + chr3L 16485752 intron CG33158 + chr3L_23_16485001 chr3L_16485001 D17-c3 1982 chr3L 16493952 16494005 chr3L 16494494 16494547 jockey 38 540 11.0 8.0 9.5 3.6 595 chr3L 16493952 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494250 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494547 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_38_16490001 chr3L_16490001 D17-c3 1983 chr3L 16503620 16503653 chr3L 16503722 16503755 7 98 5.5 11.0 8.2 0.8 135 chr3L 16503620 intron CG43373 - chr3L 16503688 intron CG43373 - chr3L 16503755 intron CG43373 - chr3L_7_16500001 chr3L_16500001 D17-c3 1984 chr3L 16533540 16533583 chr3L 16533676 16533719 8 136 2.5 9.5 6.0 1.1 179 chr3L 16533540 intron CG43373 - chr3L 16533630 intron CG43373 - chr3L 16533719 intron CG43373 - chr3L_8_16530001 chr3L_16530001 D17-c3 1985 chr3L 16540029 16540086 chr3L 16540142 16540193 23 113 7.0 6.5 6.8 2.9 164 chr3L 16540029 intron CG43373 - chr3L 16540111 intron CG43373 - chr3L 16540193 intron CG43373 - chr3L_23_16540001 chr3L_16540001 D17-c3 1986 chr3L 16563206 16563233 chr3L 16563312 16563339 14 106 7.0 0.0 3.5 3.1 133 chr3L 16563206 intergenic Mipp1 - chr3L 16563272 intergenic Mipp1 - chr3L 16563339 intergenic Mipp1 - chr3L_14_16560001 chr3L_16560001 D17-c3 1987 chr3L 16610667 16610708 chr3L 16610777 16610816 11 109 4.5 8.5 6.5 1.5 149 chr3L 16610667 3` UTR Su(P) - chr3L 16610742 exon Su(P) - chr3L 16610816 exon Su(P) - chr3L_11_16610001 chr3L_16610001 D17-c3 1988 chr3L 16616487 16616539 chr3L 16621840 16621892 297 15 5351 4.5 6.0 5.2 2.4 5405 chr3L 16616487 3` UTR Abl - chr3L 16619190 3` UTR Abl - chr3L 16621892 3` UTR Abl - chr3L_15_16615001 chr3L_16615001 D17-c3 1989 chr3L 16632201 16632261 chr3L 16632412 16632479 12 209 26.5 12.5 19.5 0.6 278 chr3L 16632201 intron Abl - chr3L 16632340 intron Abl - chr3L 16632479 intron Abl - chr3L_12_16630001 chr3L_16630001 D17-c3 1990 chr3L 16643720 16643776 chr3L 16643841 16643911 9 122 20.5 11.5 16.0 0.5 191 chr3L 16643720 intron Abl - chr3L 16643816 intron Abl - chr3L 16643911 intron Abl - chr3L_9_16640001 chr3L_16640001 D17-c3 1991 chr3L 16659082 16659092 chr3L 16659185 16659195 6 103 37.5 30.5 34.0 0.2 113 chr3L 16659082 intron Baldspot - chr3L 16659138 intron Baldspot - chr3L 16659195 intron Baldspot - chr3L_6_16655001 chr3L_16655001 D17-c3 1992 chr3L 16659094 16659130 chr3L 16659180 16659202 10 96 27.5 32.0 29.8 0.3 108 chr3L 16659094 intron Baldspot - chr3L 16659148 intron Baldspot - chr3L 16659202 intron Baldspot - chr3L_10_16655001 chr3L_16655001 D17-c3 1993 chr3L 16683995 16684038 chr3L 16689241 16689284 copia 9 5246 2.0 3.0 2.5 2.6 5289 chr3L 16683995 intron,intron Lasp -,CG43954 - chr3L 16686640 intron,intron Lasp -,CG43954 - chr3L 16689284 intron,intron,5` UTR Lasp -,CG43954 -,CR45179 + chr3L_9_16685001 chr3L_16685001 D17-c3 1994 chr3L 16749180 16749231 chr3L 16749281 16749332 8 100 12.0 11.5 11.8 0.6 152 chr3L 16749180 intergenic not near genes chr3L 16749256 intergenic not near genes chr3L 16749332 intergenic not near genes chr3L_8_16745001 chr3L_16745001 D17-c3 1995 chr3L 16772470 16772513 chr3L 16772585 16772628 7 115 19.5 15.5 17.5 0.4 158 chr3L 16772470 intron Nrt + chr3L 16772549 intron Nrt + chr3L 16772628 intron Nrt + chr3L_7_16770001 chr3L_16770001 D17-c3 1996 chr3L 16779643 16779689 chr3L 16779753 16779799 8 110 15.5 12.0 13.8 0.5 156 chr3L 16779643 5` UTR CG13025 - chr3L 16779721 5` UTR CG13025 - chr3L 16779799 intergenic CG13025 -,CG9705 + chr3L_8_16775001 chr3L_16775001 D17-c3 1997 chr3L 16808017 16808073 chr3L 16808118 16808177 15 102 7.0 2.5 4.8 2.6 160 chr3L 16808017 intron nudC + chr3L 16808097 intron nudC + chr3L 16808177 intron nudC + chr3L_15_16805001 chr3L_16805001 D17-c3 1998 chr3L 16817850 16817909 chr3L 16818015 16818067 31 164 7.0 12.5 9.8 2.9 217 chr3L 16817850 intron,intron nudC +,CG13024 - chr3L 16817958 intron,intron nudC +,CG13024 - chr3L 16818067 intron,intron nudC +,CG13024 - chr3L_31_16815001 chr3L_16815001 D17-c3 1999 chr3L 16818724 16818776 chr3L 16818825 16818877 13 101 21.0 22.5 21.8 0.6 153 chr3L 16818724 intron,intron nudC +,CG13024 - chr3L 16818800 intron,intron nudC +,CG13024 - chr3L 16818877 intron,intron nudC +,CG13024 - chr3L_13_16815001 chr3L_16815001 D17-c3 2000 chr3L 16830751 16830783 chr3L 16830859 16830891 7 107 7.5 6.5 7.0 0.9 140 chr3L 16830751 intergenic not near genes chr3L 16830821 intergenic not near genes chr3L 16830891 intergenic not near genes chr3L_7_16830001 chr3L_16830001 D17-c3 2001 chr3L 16844996 16845042 chr3L 16845134 16845180 16 137 5.5 0.5 3.0 4.0 184 chr3L 16844996 intergenic CG9669 -,CG9715 +,TSG101 + chr3L 16845088 intergenic CG9669 -,CG9715 + chr3L 16845180 intergenic CG9669 -,CG9715 + chr3L_16_16845001 chr3L_16845001 D17-c3 2002 chr3L 16873320 16873360 chr3L 16873450 16873488 16 130 6.5 9.0 7.8 1.8 168 chr3L 16873320 intron Lmpt + chr3L 16873404 intron Lmpt + chr3L 16873488 intron Lmpt + chr3L_16_16870001 chr3L_16870001 D17-c3 2003 chr3L 16886312 16886326 chr3L 16886438 16886452 7 126 21.0 20.5 20.8 0.3 140 chr3L 16886312 intron Lmpt + chr3L 16886382 intron Lmpt + chr3L 16886452 intron Lmpt + chr3L_7_16885001 chr3L_16885001 D17-c3 2004 chr3L 16913656 16913700 chr3L 16913761 16913805 8 105 21.0 20.0 20.5 0.4 149 chr3L 16913656 intron Lmpt + chr3L 16913730 intron Lmpt + chr3L 16913805 intron Lmpt + chr3L_8_16910001 chr3L_16910001 D17-c3 2005 chr3L 16941377 16941408 chr3L 16941503 16941534 10 126 21.5 21.0 21.2 0.5 157 chr3L 16941377 intron Cpr73D - chr3L 16941456 intron Cpr73D - chr3L 16941534 intron Cpr73D - chr3L_10_16940001 chr3L_16940001 D17-c3 2006 chr3L 16945705 16945761 chr3L 16954883 16954901 roo 27 9170 6.5 9.5 8.0 3.0 9196 chr3L 16945705 exon Obp73a + chr3L 16950303 intergenic not near genes chr3L 16954901 5` UTR Nc73EF + chr3L_27_16950001 chr3L_16950001 D17-c3 2007 chr3L 17034912 17034927 chr3L 17035125 17035140 G2 4 211 4.5 2.5 3.5 0.9 228 chr3L 17034912 intergenic not near genes chr3L 17035026 intergenic not near genes chr3L 17035140 intergenic not near genes chr3L_4_17035001 chr3L_17035001 D17-c3 2008 chr3L 17082014 17082062 chr3L 17082164 17082212 9 150 18.5 13.5 16.0 0.5 198 chr3L 17082014 intron Rbp6 - chr3L 17082113 intron Rbp6 - chr3L 17082212 intron Rbp6 - chr3L_9_17080001 chr3L_17080001 D17-c3 2009 chr3L 17084983 17085034 chr3L 17094157 17094208 roo 22 9174 11.5 10.0 10.8 1.9 9225 chr3L 17084983 intron Rbp6 - chr3L 17089596 intron Rbp6 - chr3L 17094208 intron Rbp6 - chr3L_22_17085001 chr3L_17085001 D17-c3 2010 chr3L 17117076 17117132 chr3L 17117186 17117242 13 110 3.5 7.5 5.5 2.0 166 chr3L 17117076 intron Rbp6 - chr3L 17117159 intron Rbp6 - chr3L 17117242 intron Rbp6 - chr3L_13_17115001 chr3L_17115001 D17-c3 2011 chr3L 17137797 17137836 chr3L 17138985 17139024 12 1187 26.0 23.5 24.8 0.5 1227 chr3L 17137797 intron Rbp6 - chr3L 17138410 intron Rbp6 - chr3L 17139024 intron Rbp6 - chr3L_12_17135001 chr3L_17135001 D17-c3 2012 chr3L 17149139 17149160 chr3L 17149245 17149266 11 106 14.0 0.0 7.0 1.4 127 chr3L 17149139 intron Rbp6 - chr3L 17149202 intron Rbp6 - chr3L 17149266 intron Rbp6 - chr3L_11_17145001 chr3L_17145001 D17-c3 2013 chr3L 17160994 17161046 chr3L 17161101 17161153 16 107 17.5 13.5 15.5 1.0 159 chr3L 17160994 intron Rbp6 - chr3L 17161074 intron Rbp6 - chr3L 17161153 intron Rbp6 - chr3L_16_17160001 chr3L_17160001 D17-c3 2014 chr3L 17202478 17202532 chr3L 17202580 17202634 20 101 23.0 21.5 22.2 0.9 156 chr3L 17202478 intron Rbp6 - chr3L 17202556 intron Rbp6 - chr3L 17202634 intron Rbp6 - chr3L_20_17200001 chr3L_17200001 D17-c3 2015 chr3L 17272219 17272266 chr3L 17272377 17272424 8 157 16.0 20.5 18.2 0.4 205 chr3L 17272219 intergenic not near genes chr3L 17272322 intergenic not near genes chr3L 17272424 intergenic not near genes chr3L_8_17270001 chr3L_17270001 D17-c3 2016 chr3L 17282978 17283019 chr3L 17283091 17283132 17 113 26.5 21.0 23.8 0.7 154 chr3L 17282978 intergenic not near genes chr3L 17283055 intergenic not near genes chr3L 17283132 intergenic not near genes chr3L_17_17280001 chr3L_17280001 D17-c3 2017 chr3L 17316429 17316471 chr3L 17316566 17316608 11 137 17.5 19.5 18.5 0.6 179 chr3L 17316429 intergenic not near genes chr3L 17316518 intergenic not near genes chr3L 17316608 intergenic not near genes chr3L_11_17315001 chr3L_17315001 D17-c3 2018 chr3L 17408896 17408928 chr3L 17408997 17409029 7 101 8.0 8.0 8.0 0.8 133 chr3L 17408896 intron blot - chr3L 17408962 intron blot - chr3L 17409029 intron blot - chr3L_7_17405001 chr3L_17405001 D17-c3 2019 chr3L 17416656 17416692 chr3L 17416821 17416862 9 169 20.5 16.0 18.2 0.5 206 chr3L 17416656 intron blot - chr3L 17416759 intron blot - chr3L 17416862 intron blot - chr3L_9_17415001 chr3L_17415001 D17-c3 2020 chr3L 17461090 17461124 chr3L 17461201 17461235 7 111 17.0 14.5 15.8 0.4 145 chr3L 17461090 intergenic not near genes chr3L 17461162 intergenic not near genes chr3L 17461235 intergenic not near genes chr3L_7_17460001 chr3L_17460001 D17-c3 2021 chr3L 17498112 17498137 chr3L 17498214 17498239 4 102 15.0 11.0 13.0 0.3 127 chr3L 17498112 intron Oatp74D + chr3L 17498176 intron Oatp74D + chr3L 17498239 intron Oatp74D + chr3L_4_17495001 chr3L_17495001 D17-c3 2022 chr3L 17516960 17517006 chr3L 17524542 17524589 412 22 7583 5.5 10.0 7.8 2.5 7629 chr3L 17516960 intron CG7564 + chr3L 17520774 intron CG7564 + chr3L 17524589 3` UTR CG7564 + chr3L_22_17520001 chr3L_17520001 D17-c3 2023 chr3L 17532385 17532434 chr3L 17532646 17532695 16 261 14.0 15.0 14.5 1.0 310 chr3L 17532385 intron Nedd4 + chr3L 17532540 intron Nedd4 + chr3L 17532695 intron Nedd4 + chr3L_16_17530001 chr3L_17530001 D17-c3 2024 chr3L 17586956 17587000 chr3L 17587115 17587159 12 158 11.5 20.0 15.8 0.7 203 chr3L 17586956 intron Eip74EF - chr3L 17587058 intron Eip74EF - chr3L 17587159 intron Eip74EF - chr3L_12_17585001 chr3L_17585001 D17-c3 2025 chr3L 17592765 17592810 chr3L 17592881 17592926 10 116 19.5 16.5 18.0 0.5 161 chr3L 17592765 intron Eip74EF - chr3L 17592846 intron Eip74EF - chr3L 17592926 intron Eip74EF - chr3L_10_17590001 chr3L_17590001 D17-c3 2026 chr3L 17678875 17678892 chr3L 17678984 17679001 4 108 12.5 9.0 10.8 0.3 126 chr3L 17678875 intron CG34251 + chr3L 17678938 intron CG34251 + chr3L 17679001 intron CG34251 + chr3L_4_17675001 chr3L_17675001 D17-c3 2027 chr3L 17690825 17690849 chr3L 17690930 17690953 5 105 4.5 2.5 3.5 1.1 128 chr3L 17690825 intron Ccn + chr3L 17690889 intron Ccn + chr3L 17690953 intron Ccn + chr3L_5_17690001 chr3L_17690001 D17-c3 2028 chr3L 17691990 17691996 chr3L 17692098 17692104 4 108 1.0 11.0 6.0 0.6 114 chr3L 17691990 intron Ccn + chr3L 17692047 intron Ccn + chr3L 17692104 intron Ccn + chr3L_4_17690001 chr3L_17690001 D17-c3 2029 chr3L 17730828 17730868 chr3L 17738183 17738223 mdg1 13 7354 7.5 5.5 6.5 1.7 7395 chr3L 17730828 intron Ccn + chr3L 17734526 intron Ccn + chr3L 17738223 intron Ccn + chr3L_13_17730001 chr3L_17730001 D17-c3 2030 chr3L 17790598 17790636 chr3L 17790888 17790926 21 290 5.5 2.5 4.0 4.2 328 chr3L 17790598 intergenic CG42815 - chr3L 17790762 intergenic CG42815 - chr3L 17790926 intergenic CG42815 - chr3L_21_17790001 chr3L_17790001 D17-c3 2031 chr3L 17834298 17834342 chr3L 17834487 17834531 6 189 6.0 6.0 6.0 0.9 233 chr3L 17834298 intron Grd + chr3L 17834414 intron Grd + chr3L 17834531 intron Grd + chr3L_6_17830001 chr3L_17830001 D17-c3 2032 chr3L 17836185 17836238 chr3L 17836287 17836340 19 101 10.0 15.5 12.8 1.4 155 chr3L 17836185 intron Grd + chr3L 17836262 intron Grd + chr3L 17836340 intron Grd + chr3L_19_17835001 chr3L_17835001 D17-c3 2033 chr3L 17884678 17884709 chr3L 17884803 17884834 7 124 7.5 2.5 5.0 1.2 156 chr3L 17884678 intergenic CG5506 - chr3L 17884756 intergenic CG5506 - chr3L 17884834 intergenic CG5506 - chr3L_7_17880001 chr3L_17880001 D17-c3 2034 chr3L 17918349 17918399 chr3L 17921177 17921227 opus 11 2827 4.0 5.5 4.8 1.9 2878 chr3L 17918349 intergenic not near genes chr3L 17919788 intergenic not near genes chr3L 17921227 intergenic not near genes chr3L_11_17915001 chr3L_17915001 D17-c3 2035 chr3L 17957053 17957075 chr3L 17957158 17957190 7 112 30.0 25.5 27.8 0.2 137 chr3L 17957053 intron Eip75B - chr3L 17957122 intron Eip75B - chr3L 17957190 intron Eip75B - chr3L_7_17955001 chr3L_17955001 D17-c3 2036 chr3L 17968119 17968167 chr3L 17968220 17968273 14 105 15.5 16.0 15.8 0.8 154 chr3L 17968119 intron Eip75B - chr3L 17968196 intron Eip75B - chr3L 17968273 intron Eip75B - chr3L_14_17965001 chr3L_17965001 D17-c3 2037 chr3L 17991553 17991588 chr3L 17991656 17991691 6 103 11.5 11.0 11.2 0.5 138 chr3L 17991553 intron Eip75B - chr3L 17991622 intron Eip75B - chr3L 17991691 intron Eip75B - chr3L_6_17990001 chr3L_17990001 D17-c3 2038 chr3L 18047684 18047733 chr3L 18056765 18056815 roo 8 9082 2.5 5.5 4.0 1.6 9131 chr3L 18047684 intron Eip75B - chr3L 18052250 intron Eip75B - chr3L 18056815 intron Eip75B - chr3L_8_18050001 chr3L_18050001 D17-c3 2039 chr3L 18064037 18064075 chr3L 18064148 18064186 5 111 0.5 2.0 1.2 2.3 149 chr3L 18064037 intron Eip75B - chr3L 18064112 intron Eip75B - chr3L 18064186 intron Eip75B - chr3L_5_18060001 chr3L_18060001 D17-c3 2040 chr3L 18093732 18093784 chr3L 18093834 18093886 15 102 18.0 13.5 15.8 0.9 154 chr3L 18093732 intron CG13698 - chr3L 18093809 intron CG13698 - chr3L 18093886 intron CG13698 - chr3L_15_18090001 chr3L_18090001 D17-c3 2041 chr3L 18106229 18106269 chr3L 18106373 18106413 12 144 17.5 11.5 14.5 0.8 184 chr3L 18106229 intergenic CG13698 -,mRpS26 + chr3L 18106321 intergenic CG13698 -,mRpS26 + chr3L 18106413 intergenic mRpS26 +,CG13698 - chr3L_12_18105001 chr3L_18105001 D17-c3 2042 chr3L 18118188 18118235 chr3L 18118291 18118333 16 103 2.5 2.5 2.5 4.6 145 chr3L 18118188 3` UTR,intron CG32195 +,CG7341 + chr3L 18118260 3` UTR,intron CG32195 +,CG7341 + chr3L 18118333 3` UTR,intron CG32195 +,CG7341 + chr3L_16_18115001 chr3L_18115001 D17-c3 2043 chr3L 18119612 18119675 chr3L 18119749 18119798 6 124 8.0 8.5 8.2 0.7 186 chr3L 18119612 intron CG7341 + chr3L 18119705 intron CG7341 + chr3L 18119798 5` UTR CG7341 + chr3L_6_18115001 chr3L_18115001 D17-c3 2044 chr3L 18124400 18124430 chr3L 18124509 18124539 5 109 6.5 9.0 7.8 0.6 139 chr3L 18124400 intergenic not near genes chr3L 18124470 intergenic not near genes chr3L 18124539 intergenic not near genes chr3L_5_18120001 chr3L_18120001 D17-c3 2045 chr3L 18150292 18150340 chr3L 18150414 18150462 8 122 6.5 5.5 6.0 1.1 170 chr3L 18150292 intron CG7330 + chr3L 18150377 intron CG7330 + chr3L 18150462 intron CG7330 + chr3L_8_18150001 chr3L_18150001 D17-c3 2046 chr3L 18160849 18160883 chr3L 18160963 18160997 7 114 19.5 17.5 18.5 0.4 148 chr3L 18160849 intron CG13699 - chr3L 18160923 intron CG13699 - chr3L 18160997 intron CG13699 - chr3L_7_18160001 chr3L_18160001 D17-c3 2047 chr3L 18172667 18172703 chr3L 18172768 18172804 9 101 13.0 2.0 7.5 1.1 137 chr3L 18172667 intron W - chr3L 18172736 intron W - chr3L 18172804 intron W - chr3L_9_18170001 chr3L_18170001 D17-c3 2048 chr3L 18186603 18186618 chr3L 18186768 18186782 7 164 10.5 5.0 7.8 0.8 179 chr3L 18186603 intergenic not near genes chr3L 18186692 intergenic not near genes chr3L 18186782 intergenic not near genes chr3L_7_18185001 chr3L_18185001 D17-c3 2049 chr3L 18200953 18200962 chr3L 18201323 18201367 9 382 16.0 17.5 16.8 0.5 414 chr3L 18200953 intergenic not near genes chr3L 18201160 intergenic CG7320 + chr3L 18201367 intergenic CG7320 + chr3L_9_18200001 chr3L_18200001 D17-c3 2050 chr3L 18203578 18203624 chr3L 18203698 18203732 6 112 15.0 13.0 14.0 0.4 154 chr3L 18203578 3` UTR CG7320 + chr3L 18203655 intergenic CG7320 + chr3L 18203732 intergenic CG7320 + chr3L_6_18200001 chr3L_18200001 D17-c3 2051 chr3L 18221085 18221130 chr3L 18221190 18221231 8 104 6.5 12.5 9.5 0.8 146 chr3L 18221085 intergenic not near genes chr3L 18221158 intergenic not near genes chr3L 18221231 intergenic not near genes chr3L_8_18220001 chr3L_18220001 D17-c3 2052 chr3L 18223138 18223188 chr3L 18223246 18223308 10 110 2.0 6.0 4.0 2.0 170 chr3L 18223138 intergenic not near genes chr3L 18223223 intergenic not near genes chr3L 18223308 intergenic not near genes chr3L_10_18220001 chr3L_18220001 D17-c3 2053 chr3L 18248937 18248980 chr3L 18249060 18249100 11 123 8.0 16.0 12.0 0.8 163 chr3L 18248937 intergenic not near genes chr3L 18249018 intergenic not near genes chr3L 18249100 intergenic not near genes chr3L_11_18245001 chr3L_18245001 D17-c3 2054 chr3L 18251741 18251780 chr3L 18251859 18251898 12 117 15.0 17.0 16.0 0.7 157 chr3L 18251741 intergenic CheA75a + chr3L 18251820 intergenic CheA75a + chr3L 18251898 intergenic CheA75a + chr3L_12_18250001 chr3L_18250001 D17-c3 2055 chr3L 18257117 18257164 chr3L 18257219 18257265 14 102 21.5 21.0 21.2 0.6 148 chr3L 18257117 intergenic not near genes chr3L 18257191 intergenic not near genes chr3L 18257265 intergenic not near genes chr3L_14_18255001 chr3L_18255001 D17-c3 2056 chr3L 18262446 18262474 chr3L 18262554 18262582 4 108 8.5 9.5 9.0 0.4 136 chr3L 18262446 intergenic not near genes chr3L 18262514 intergenic not near genes chr3L 18262582 intergenic not near genes chr3L_4_18260001 chr3L_18260001 D17-c3 2057 chr3L 18283907 18283955 chr3L 18284009 18284057 11 102 20.0 18.5 19.2 0.5 150 chr3L 18283907 intergenic not near genes chr3L 18283982 intergenic not near genes chr3L 18284057 intergenic not near genes chr3L_11_18280001 chr3L_18280001 D17-c3 2058 chr3L 18301328 18301380 chr3L 18301442 18301494 9 114 0.0 2.5 1.2 4.1 166 chr3L 18301328 intergenic CG13700 - chr3L 18301411 intergenic CG13700 - chr3L 18301494 intergenic CG13700 - chr3L_9_18300001 chr3L_18300001 D17-c3 2059 chr3L 18343659 18343682 chr3L 18343962 18343973 9 302 3.0 18.5 10.8 0.8 314 chr3L 18343659 intergenic not near genes chr3L 18343816 intergenic not near genes chr3L 18343973 intergenic not near genes chr3L_9_18340001 chr3L_18340001 D17-c3 2060 chr3L 18408712 18408761 chr3L 18408823 18408872 9 111 12.5 11.5 12.0 0.7 160 chr3L 18408712 intergenic not near genes chr3L 18408792 intergenic not near genes chr3L 18408872 intergenic not near genes chr3L_9_18405001 chr3L_18405001 D17-c3 2061 chr3L 9013689 9013690 chr3L 18417066 18417066 7 9403376 47.5 31.0 39.2 0.2 9403377 chr3L 9013689 intron Doc2 - chr3L 13715378 intron bru-3 - chr3L 18417066 intergenic not near genes chr3L_7_13715001 chr3L_13715001 D17-c3 2062 chr3L 18436043 18436089 chr3L 18436166 18436212 14 123 3.0 4.0 3.5 3.1 169 chr3L 18436043 intergenic not near genes chr3L 18436128 intergenic not near genes chr3L 18436212 intergenic not near genes chr3L_14_18435001 chr3L_18435001 D17-c3 2063 chr3L 18448593 18448614 chr3L 18448710 18448731 8 117 9.5 7.0 8.2 0.9 138 chr3L 18448593 intergenic not near genes chr3L 18448662 intergenic not near genes chr3L 18448731 intergenic not near genes chr3L_8_18445001 chr3L_18445001 D17-c3 2064 chr3L 18456247 18456293 chr3L 18456360 18456406 17 112 6.0 5.0 5.5 2.6 159 chr3L 18456247 intergenic CR44670 - chr3L 18456326 intergenic CR44670 - chr3L 18456406 3` UTR CR44670 - chr3L_17_18455001 chr3L_18455001 D17-c3 2065 chr3L 18479045 18479094 chr3L 18479163 18479221 16 125 3.5 5.0 4.2 3.1 176 chr3L 18479045 5` UTR CR44673 + chr3L 18479133 5` UTR CR44673 + chr3L 18479221 5` UTR CR44673 + chr3L_16_18475001 chr3L_18475001 D17-c3 2066 chr3L 18506113 18506160 chr3L 18509601 18509638 F-element 13 3487 1.5 2.5 2.0 4.3 3525 chr3L 18506113 intergenic not near genes chr3L 18507876 intergenic not near genes chr3L 18509638 intergenic not near genes chr3L_13_18505001 chr3L_18505001 D17-c3 2067 chr3L 18528605 18528657 chr3L 18537791 18537843 roo 12 9185 5.5 7.0 6.2 1.7 9238 chr3L 18528605 intergenic not near genes chr3L 18533224 intergenic not near genes chr3L 18537843 intergenic not near genes chr3L_12_18530001 chr3L_18530001 D17-c3 2068 chr3L 18546679 18546736 chr3L 18546798 18546855 33 119 8.5 5.5 7.0 4.1 176 chr3L 18546679 intergenic not near genes chr3L 18546767 intergenic not near genes chr3L 18546855 intergenic not near genes chr3L_33_18545001 chr3L_18545001 D17-c3 2069 chr3L 18593922 18593981 chr3L 18595927 18595989 Doc 17 2005 4.0 3.0 3.5 3.8 2067 chr3L 18593922 intergenic term - chr3L 18594956 intergenic not near genes chr3L 18595989 intergenic CR45389 + chr3L_17_18590001 chr3L_18590001 D17-c3 2070 chr3L 18638560 18638605 chr3L 18638679 18638724 11 119 4.0 5.0 4.5 2.0 164 chr3L 18638560 intron MYPT-75D + chr3L 18638642 intron MYPT-75D + chr3L 18638724 intron MYPT-75D + chr3L_11_18635001 chr3L_18635001 D17-c3 2071 chr3L 18656162 18656213 chr3L 18656272 18656323 16 110 9.0 10.5 9.8 1.5 161 chr3L 18656162 intron MYPT-75D + chr3L 18656242 intron MYPT-75D + chr3L 18656323 intron MYPT-75D + chr3L_16_18655001 chr3L_18655001 D17-c3 2072 chr3L 18657719 18657765 chr3L 18657883 18657929 13 161 11.0 10.0 10.5 1.1 210 chr3L 18657719 intron MYPT-75D + chr3L 18657824 intron MYPT-75D + chr3L 18657929 intron MYPT-75D + chr3L_13_18655001 chr3L_18655001 D17-c3 2073 chr3L 18686939 18686990 chr3L 18687395 18687445 24 456 5.5 1.5 3.5 5.3 506 chr3L 18686939 intergenic not near genes chr3L 18687192 intergenic not near genes chr3L 18687445 intergenic not near genes chr3L_24_18685001 chr3L_18685001 D17-c3 2074 chr3L 18696049 18696099 chr3L 18696193 18696243 25 139 8.0 13.0 10.5 2.2 194 chr3L 18696049 intergenic Dic4 -,CG6893 + chr3L 18696146 intergenic Dic4 -,CG6893 + chr3L 18696243 intergenic Dic4 - chr3L_25_18695001 chr3L_18695001 D17-c3 2075 chr3L 18710770 18710785 chr3L 18718745 18718760 Stalker2 4 7975 6.5 5.5 6.0 0.6 7990 chr3L 18710770 intergenic not near genes chr3L 18714765 intergenic not near genes chr3L 18718760 intergenic not near genes chr3L_4_18710001 chr3L_18710001 D17-c3 2076 chr3L 18721747 18721755 chr3L 18721863 18721871 5 116 17.5 3.0 10.2 0.4 124 chr3L 18721747 intergenic CG12477 - chr3L 18721809 intergenic CG12477 - chr3L 18721871 intergenic CG12477 - chr3L_5_18720001 chr3L_18720001 D17-c3 2077 chr3L 18721757 18721801 chr3L 18721861 18721917 11 115 7.0 3.0 5.0 1.8 160 chr3L 18721757 intergenic CG12477 - chr3L 18721837 intergenic CG12477 - chr3L 18721917 3` UTR CG12477 - chr3L_11_18720001 chr3L_18720001 D17-c3 2078 chr3L 18753541 18753558 chr3L 18753632 18753665 6 104 3.5 2.5 3.0 1.5 124 chr3L 18753541 intron ftz-f1 - chr3L 18753603 intron ftz-f1 - chr3L 18753665 intron ftz-f1 - chr3L_6_18750001 chr3L_18750001 D17-c3 2079 chr3L 18772385 18772436 chr3L 18781091 18781142 roo 20 8706 8.0 8.0 8.0 2.2 8757 chr3L 18772385 intron ftz-f1 - chr3L 18776764 intron ftz-f1 - chr3L 18781142 intron ftz-f1 - chr3L_20_18775001 chr3L_18775001 D17-c3 2080 chr3L 18797286 18797337 chr3L 18797395 18797446 22 108 3.0 8.0 5.5 3.4 160 chr3L 18797286 intron ftz-f1 - chr3L 18797366 intron ftz-f1 - chr3L 18797446 intron ftz-f1 - chr3L_22_18795001 chr3L_18795001 D17-c3 2081 chr3L 18810122 18810157 chr3L 18810224 18810264 4 104 15.0 7.5 11.2 0.3 142 chr3L 18810122 intron CG14073 - chr3L 18810193 intron CG14073 - chr3L 18810264 intron CG14073 - chr3L_4_18810001 chr3L_18810001 D17-c3 2082 chr3L 18838722 18838774 chr3L 18838845 18838898 8 124 4.0 10.0 7.0 1.0 176 chr3L 18838722 intron Indy - chr3L 18838810 intron Indy - chr3L 18838898 intron Indy - chr3L_8_18835001 chr3L_18835001 D17-c3 2083 chr3L 18843853 18843868 chr3L 18843976 18843991 4 123 19.0 14.0 16.5 0.2 138 chr3L 18843853 intron Indy - chr3L 18843922 intron Indy - chr3L 18843991 intron Indy - chr3L_4_18840001 chr3L_18840001 D17-c3 2084 chr3L 18861740 18861787 chr3L 18861858 18861905 11 118 18.5 17.0 17.8 0.6 165 chr3L 18861740 intergenic not near genes chr3L 18861822 intergenic not near genes chr3L 18861905 intergenic not near genes chr3L_11_18860001 chr3L_18860001 D17-c3 2085 chr3L 18868956 18868979 chr3L 18869062 18869085 5 106 10.5 9.0 9.8 0.5 129 chr3L 18868956 3` UTR Dysb + chr3L 18869020 3` UTR Dysb + chr3L 18869085 3` UTR Dysb + chr3L_5_18865001 chr3L_18865001 D17-c3 2086 chr3L 18888415 18888446 chr3L 18888522 18888553 6 107 14.5 10.5 12.5 0.4 138 chr3L 18888415 intron CG3961 - chr3L 18888484 intron CG3961 - chr3L 18888553 intron CG3961 - chr3L_6_18885001 chr3L_18885001 D17-c3 2087 chr3L 18896771 18896790 chr3L 18896931 18896949 5 159 11.0 10.5 10.8 0.4 178 chr3L 18896771 intron CG3902 - chr3L 18896860 intron CG3902 - chr3L 18896949 intron CG3902 - chr3L_5_18895001 chr3L_18895001 D17-c3 2088 chr3L 18924459 18924505 chr3L 18924555 18924606 16 101 6.0 1.5 3.8 3.3 147 chr3L 18924459 intron CG32204 - chr3L 18924532 intron CG32204 - chr3L 18924606 intron CG32204 - chr3L_16_18920001 chr3L_18920001 D17-c3 2089 chr3L 18928882 18928893 chr3L 18928987 18928998 5 105 0.0 5.5 2.8 1.3 116 chr3L 18928882 intron CG32204 - chr3L 18928940 intron CG32204 - chr3L 18928998 intron CG32204 - chr3L_5_18925001 chr3L_18925001 D17-c3 2090 chr3L 18933069 18933127 chr3L 18933179 18933237 14 110 11.5 14.0 12.8 1.0 168 chr3L 18933069 intron CG32204 - chr3L 18933153 intron CG32204 - chr3L 18933237 intron CG32204 - chr3L_14_18930001 chr3L_18930001 D17-c3 2091 chr3L 18933614 18933659 chr3L 18933733 18933777 8 118 15.0 16.5 15.8 0.5 163 chr3L 18933614 intron CG32204 - chr3L 18933696 intron CG32204 - chr3L 18933777 intron CG32204 - chr3L_8_18930001 chr3L_18930001 D17-c3 2092 chr3L 18941693 18941728 chr3L 18941811 18941846 7 118 12.5 17.0 14.8 0.4 153 chr3L 18941693 intron CG32204 - chr3L 18941770 intron CG32204 - chr3L 18941846 intron CG32204 - chr3L_7_18940001 chr3L_18940001 D17-c3 2093 chr3L 18959983 18960029 chr3L 18960088 18960135 5 106 9.0 9.5 9.2 0.5 152 chr3L 18959983 intergenic not near genes chr3L 18960059 intergenic not near genes chr3L 18960135 intergenic not near genes chr3L_5_18960001 chr3L_18960001 D17-c3 2094 chr3L 18969572 18969627 chr3L 18969693 18969748 17 121 21.5 21.0 21.2 0.8 176 chr3L 18969572 intergenic not near genes chr3L 18969660 intergenic not near genes chr3L 18969748 intergenic not near genes chr3L_17_18965001 chr3L_18965001 D17-c3 2095 chr3L 19008826 19008871 chr3L 19009189 19009234 jockey 19 363 7.0 8.5 7.8 2.2 408 chr3L 19008826 intron nkd - chr3L 19009030 intron nkd - chr3L 19009234 intron nkd - chr3L_19_19005001 chr3L_19005001 D17-c3 2096 chr3L 19015157 19015185 chr3L 19015266 19015294 8 109 11.0 3.5 7.2 1.0 137 chr3L 19015157 intron nkd - chr3L 19015226 intron nkd - chr3L 19015294 intron nkd - chr3L_8_19015001 chr3L_19015001 D17-c3 2097 chr3L 19025907 19025969 chr3L 19026016 19026079 17 109 24.5 18.0 21.2 0.8 172 chr3L 19025907 intron nkd - chr3L 19025993 intron nkd - chr3L 19026079 intron nkd - chr3L_17_19025001 chr3L_19025001 D17-c3 2098 chr3L 19082012 19082066 chr3L 19082139 19082193 16 126 25.0 24.0 24.5 0.6 181 chr3L 19082012 intron Mkp3 - chr3L 19082102 intron Mkp3 - chr3L 19082193 intron Mkp3 - chr3L_16_19080001 chr3L_19080001 D17-c3 2099 chr3L 19111380 19111400 chr3L 19111490 19111510 11 109 27.5 30.5 29.0 0.4 130 chr3L 19111380 intron CG14082 - chr3L 19111445 intron CG14082 - chr3L 19111510 intron CG14082 - chr3L_11_19110001 chr3L_19110001 D17-c3 2100 chr3L 19114178 19114223 chr3L 19114314 19114337 9 133 9.5 3.0 6.2 1.2 159 chr3L 19114178 intron CG14082 - chr3L 19114258 intron CG14082 - chr3L 19114337 intron CG14082 - chr3L_9_19110001 chr3L_19110001 D17-c3 2101 chr3L 19117018 19117076 chr3L 19124490 19124548 mdg1 23 7472 8.0 5.5 6.8 2.9 7530 chr3L 19117018 intron CG14082 - chr3L 19120783 intron CG14082 - chr3L 19124548 intron CG14082 - chr3L_23_19120001 chr3L_19120001 D17-c3 2102 chr3L 19131309 19131353 chr3L 19132827 19132871 20 1524 52.0 66.0 59.0 0.3 1562 chr3L 19131309 intron CG14082 - chr3L 19132090 intron CG14082 - chr3L 19132871 intron CG14082 - chr3L_20_19130001 chr3L_19130001 D17-c3 2103 chr3L 19133652 19133699 chr3L 19133761 19133808 10 108 1.5 5.0 3.2 2.4 156 chr3L 19133652 intron CG14082 - chr3L 19133730 intron CG14082 - chr3L 19133808 intron CG14082 - chr3L_10_19130001 chr3L_19130001 D17-c3 2104 chr3L 19138126 19138152 chr3L 19138233 19138271 10 114 0.0 4.5 2.2 3.1 145 chr3L 19138126 intron CG14082 - chr3L 19138198 intron CG14082 - chr3L 19138271 intron CG14082 - chr3L_10_19135001 chr3L_19135001 D17-c3 2105 chr3L 19182369 19182415 chr3L 19182475 19182521 20 105 4.0 7.0 5.5 3.1 152 chr3L 19182369 intron fz2 - chr3L 19182445 intron fz2 - chr3L 19182521 intron fz2 - chr3L_20_19180001 chr3L_19180001 D17-c3 2106 chr3L 19186417 19186425 chr3L 19186534 19186542 6 116 5.5 6.0 5.8 0.9 125 chr3L 19186417 intron fz2 - chr3L 19186480 intron fz2 - chr3L 19186542 intron fz2 - chr3L_6_19185001 chr3L_19185001 D17-c3 2107 chr3L 19208035 19208084 chr3L 19209434 19209483 Doc 12 1398 7.0 4.5 5.8 1.8 1448 chr3L 19208035 intron fz2 - chr3L 19208759 intron fz2 - chr3L 19209483 intron fz2 - chr3L_12_19205001 chr3L_19205001 D17-c3 2108 chr3L 19220632 19220633 chr3L 22908066 22908067 16 3687434 25.5 38.0 31.8 0.5 3687435 chr3L 19220632 intron fz2 - chr3L 21064350 intron siz + chr3L 22908067 intergenic not near genes chr3L_16_21060001 chr3L_21060001 D17-c3 2109 chr3L 19220634 19220634 chr3L 22908067 22908067 7 3687433 26.0 38.0 32.0 0.2 3687433 chr3L 19220634 intron fz2 - chr3L 21064350 intron siz + chr3L 22908067 intergenic not near genes chr3L_7_21060001 chr3L_21060001 D17-c3 2110 chr3L 19220635 19220637 chr3L 22908066 22908067 15 3687430 26.0 38.0 32.0 0.5 3687432 chr3L 19220635 intron fz2 - chr3L 21064351 intron siz + chr3L 22908067 intergenic not near genes chr3L_15_21060001 chr3L_21060001 D17-c3 2111 chr3L 19238381 19238420 chr3L 19238952 19238991 25 571 9.0 8.0 8.5 2.6 610 chr3L 19238381 intergenic not near genes chr3L 19238686 intergenic not near genes chr3L 19238991 intergenic not near genes chr3L_25_19235001 chr3L_19235001 D17-c3 2112 chr3L 19248829 19248861 chr3L 19248939 19248977 6 114 5.5 4.5 5.0 1.0 148 chr3L 19248829 intergenic not near genes chr3L 19248903 intergenic not near genes chr3L 19248977 intergenic not near genes chr3L_6_19245001 chr3L_19245001 D17-c3 2113 chr3L 19269794 19269849 chr3L 19270023 19270049 20 219 3.5 7.0 5.2 3.2 255 chr3L 19269794 intron,exon CG14085 +,CG14088 - chr3L 19269922 intron,exon CG14085 +,CG14088 - chr3L 19270049 intron,exon CG14085 +,CG14088 - chr3L_20_19265001 chr3L_19265001 D17-c3 2114 chr3L 19282244 19282291 chr3L 19282365 19282412 20 121 2.5 8.5 5.5 3.1 168 chr3L 19282244 3` UTR Gbs-76A - chr3L 19282328 3` UTR Gbs-76A - chr3L 19282412 3` UTR Gbs-76A - chr3L_20_19280001 chr3L_19280001 D17-c3 2115 chr3L 19325394 19325433 chr3L 19325476 19325499 13 95 5.5 6.0 5.8 1.9 105 chr3L 19325394 intron pip - chr3L 19325446 intron pip - chr3L 19325499 intron pip - chr3L_13_19325001 chr3L_19325001 D17-c3 2116 chr3L 19338341 19338399 chr3L 19338461 19338516 5 114 0.5 2.0 1.2 2.3 175 chr3L 19338341 intergenic not near genes chr3L 19338428 intergenic not near genes chr3L 19338516 intergenic not near genes chr3L_5_19335001 chr3L_19335001 D17-c3 2117 chr3L 19342755 19342774 chr3L 19342861 19342890 10 115 2.5 7.5 5.0 1.7 135 chr3L 19342755 3` UTR CG32206 - chr3L 19342822 3` UTR CG32206 - chr3L 19342890 3` UTR CG32206 - chr3L_10_19340001 chr3L_19340001 D17-c3 2118 chr3L 19346875 19346883 chr3L 19346967 19346986 5 99 1.0 9.0 5.0 0.8 111 chr3L 19346875 intron CG32206 - chr3L 19346930 intron CG32206 - chr3L 19346986 intron CG32206 - chr3L_5_19345001 chr3L_19345001 D17-c3 2119 chr3L 19417795 19417834 chr3L 19417900 19417929 10 101 6.0 8.5 7.2 1.2 134 chr3L 19417795 intergenic not near genes chr3L 19417862 intergenic not near genes chr3L 19417929 intergenic not near genes chr3L_10_19415001 chr3L_19415001 D17-c3 2120 chr3L 19426732 19426763 chr3L 19426835 19426866 17 100 15.5 9.0 12.2 1.3 134 chr3L 19426732 intergenic not near genes chr3L 19426799 intergenic not near genes chr3L 19426866 intergenic not near genes chr3L_17_19425001 chr3L_19425001 D17-c3 2121 chr3L 19426765 19426779 chr3L 19426832 19426866 10 92 15.0 8.5 11.8 0.8 101 chr3L 19426765 intergenic not near genes chr3L 19426816 intergenic not near genes chr3L 19426866 intergenic not near genes chr3L_10_19425001 chr3L_19425001 D17-c3 2122 chr3L 19434736 19434789 chr3L 19434840 19434893 24 104 8.0 6.0 7.0 3.0 157 chr3L 19434736 intergenic not near genes chr3L 19434814 intergenic not near genes chr3L 19434893 intergenic not near genes chr3L_24_19430001 chr3L_19430001 D17-c3 2123 chr3L 19439231 19439289 chr3L 19439354 19439400 4 118 0.0 4.0 2.0 1.3 169 chr3L 19439231 intergenic not near genes chr3L 19439316 intergenic not near genes chr3L 19439400 intergenic not near genes chr3L_4_19435001 chr3L_19435001 D17-c3 2124 chr3L 19488480 19488499 chr3L 19488587 19488606 6 107 12.0 5.0 8.5 0.6 126 chr3L 19488480 intergenic pncr009:3L -,CG32212 + chr3L 19488543 intergenic pncr009:3L -,CG32212 + chr3L 19488606 intergenic pncr009:3L -,CG32212 + chr3L_6_19485001 chr3L_19485001 D17-c3 2125 chr3L 19783419 19783466 chr3L 19783717 19783764 25 298 6.0 7.5 6.8 3.2 345 chr3L 19783419 intron,intron CG42637 -,Gyc76C - chr3L 19783592 intron,intron CG42637 -,Gyc76C - chr3L 19783764 intron,intron CG42637 -,Gyc76C - chr3L_25_19780001 chr3L_19780001 D17-c3 2126 chr3L 19820277 19820310 chr3L 19827851 19827879 412 17 7574 8.0 3.5 5.8 2.5 7602 chr3L 19820277 intron Deaf1 + chr3L 19824078 intron Deaf1 + chr3L 19827879 intron Deaf1 + chr3L_17_19820001 chr3L_19820001 D17-c3 2127 chr3L 19848487 19848530 chr3L 19857702 19857745 roo 11 9215 6.5 5.5 6.0 1.6 9258 chr3L 19848487 intron Papss + chr3L 19853116 intron Papss + chr3L 19857745 intron Papss + chr3L_11_19850001 chr3L_19850001 D17-c3 2128 chr3L 19861795 19861853 chr3L 19863608 19863666 S-element 23 1813 5.5 2.0 3.8 4.8 1871 chr3L 19861795 5` UTR CR45433 + chr3L 19862730 intergenic not near genes chr3L 19863666 intergenic not near genes chr3L_23_19860001 chr3L_19860001 D17-c3 2129 chr3L 19880656 19880711 chr3L 19885048 19885103 39 4393 87.5 68.0 77.8 0.5 4447 chr3L 19880656 exon CG8334 + chr3L 19882880 exon Mi-2 - chr3L 19885103 exon Mi-2 - chr3L_39_19880001 chr3L_19880001 D17-c3 2130 chr3L 19933514 19933562 chr3L 19934361 19934409 16 847 6.0 6.5 6.2 2.2 895 chr3L 19933514 intergenic CR45678 + chr3L 19933962 5` UTR CR45678 + chr3L 19934409 intergenic CR45678 + chr3L_16_19930001 chr3L_19930001 D17-c3 2131 chr3L 19935424 19935463 chr3L 19937009 19937048 15 1584 5.5 4.0 4.8 2.6 1624 chr3L 19935424 intergenic not near genes chr3L 19936236 intergenic not near genes chr3L 19937048 intergenic not near genes chr3L_15_19935001 chr3L_19935001 D17-c3 2132 chr3L 19981178 19981236 chr3L 19981283 19981341 23 105 3.0 3.5 3.2 5.5 163 chr3L 19981178 intergenic not near genes chr3L 19981260 intergenic CG17732 + chr3L 19981341 intergenic CG17732 + chr3L_23_19980001 chr3L_19980001 D17-c3 2133 chr3L 20033855 20033896 chr3L 20033956 20033997 14 101 5.0 6.5 5.8 2.1 142 chr3L 20033855 intergenic not near genes chr3L 20033926 intergenic not near genes chr3L 20033997 intergenic not near genes chr3L_14_20030001 chr3L_20030001 D17-c3 2134 chr3L 20086766 20086815 chr3L 20086869 20086918 13 103 2.0 5.0 3.5 2.9 152 chr3L 20086766 intron sNPF-R - chr3L 20086842 intron sNPF-R - chr3L 20086918 intron sNPF-R - chr3L_13_20085001 chr3L_20085001 D17-c3 2135 chr3L 20113638 20113682 chr3L 20122920 20122964 roo 12 9280 6.5 4.0 5.2 1.9 9326 chr3L 20113638 intergenic not near genes chr3L 20118301 intergenic not near genes chr3L 20122964 intergenic not near genes chr3L_12_20115001 chr3L_20115001 D17-c3 2136 chr3L 20143059 20143112 chr3L 20143164 20143217 21 105 4.0 4.0 4.0 4.2 158 chr3L 20143059 intergenic not near genes chr3L 20143138 intergenic not near genes chr3L 20143217 intergenic not near genes chr3L_21_20140001 chr3L_20140001 D17-c3 2137 chr3L 20148261 20148313 chr3L 20148376 20148428 8 115 11.0 13.0 12.0 0.6 167 chr3L 20148261 intergenic not near genes chr3L 20148344 intergenic not near genes chr3L 20148428 intergenic not near genes chr3L_8_20145001 chr3L_20145001 D17-c3 2138 chr3L 20156143 20156193 chr3L 20156290 20156340 23 146 8.0 6.0 7.0 2.9 197 chr3L 20156143 intron CG42674 - chr3L 20156242 intron CG42674 - chr3L 20156340 intron CG42674 - chr3L_23_20155001 chr3L_20155001 D17-c3 2139 chr3L 20187446 20187486 chr3L 20187545 20187590 11 104 30.0 31.5 30.8 0.3 144 chr3L 20187446 intron CG42674 - chr3L 20187518 intron CG42674 - chr3L 20187590 intron CG42674 - chr3L_11_20185001 chr3L_20185001 D17-c3 2140 chr3L 20257309 20257360 chr3L 20258454 20258505 pogo 27 1145 7.5 6.0 6.8 3.5 1196 chr3L 20257309 intron rdgC + chr3L 20257907 intron rdgC + chr3L 20258505 intron rdgC + chr3L_27_20255001 chr3L_20255001 D17-c3 2141 chr3L 20283378 20283412 chr3L 20283462 20283517 19 100 10.0 9.5 9.8 1.8 139 chr3L 20283378 intron gogo - chr3L 20283448 intron gogo - chr3L 20283517 intron gogo - chr3L_19_20280001 chr3L_20280001 D17-c3 2142 chr3L 20321116 20321126 chr3L 20342902 20342907 17.6 4 21782 19.0 24.5 21.8 0.2 21791 chr3L 20321116 exon Spn77Bb + chr3L 20332012 intergenic not near genes chr3L 20342907 exon Spn77Bc + chr3L_4_20330001 chr3L_20330001 D17-c3 2143 chr3L 20386919 20386971 chr3L 20387046 20387098 22 127 6.0 8.0 7.0 2.8 179 chr3L 20386919 intron fbl + chr3L 20387008 intron fbl + chr3L 20387098 intron fbl + chr3L_22_20385001 chr3L_20385001 D17-c3 2144 chr3L 20462562 20462603 chr3L 20462668 20462709 18 106 4.0 7.5 5.8 2.6 147 chr3L 20462562 intron atk - chr3L 20462636 intron atk - chr3L 20462709 intron atk - chr3L_18_20460001 chr3L_20460001 D17-c3 2145 chr3L 20476733 20476777 chr3L 20484357 20484401 springer 17 7623 7.0 9.0 8.0 1.9 7668 chr3L 20476733 3` UTR isoQC + chr3L 20480567 intergenic not near genes chr3L 20484401 3` UTR ZnT77C - chr3L_17_20480001 chr3L_20480001 D17-c3 2146 chr3L 20487641 20487669 chr3L 20488117 20488145 INE-1 19 476 15.5 6.5 11.0 1.6 504 chr3L 20487641 intron ZnT77C - chr3L 20487893 intron ZnT77C - chr3L 20488145 exon ZnT77C - chr3L_19_20485001 chr3L_20485001 D17-c3 2147 chr3L 20525228 20525228 chr3L 24821492 24821493 5 4296264 23.0 25.0 24.0 0.2 4296265 chr3L 20525228 intron CG4825 - chr3L 22673360 intron CG14457 + chr3L 24821493 intergenic not near genes chr3L_5_22670001 chr3L_22670001 D17-c3 2148 chr3L 20525229 20525229 chr3L 22908066 22908067 8 2382838 23.0 38.0 30.5 0.3 2382838 chr3L 20525229 intron CG4825 - chr3L 21716648 intergenic not near genes chr3L 22908067 intergenic not near genes chr3L_8_21715001 chr3L_21715001 D17-c3 2149 chr3L 20525230 20525230 chr3L 22908067 22908067 4 2382837 23.0 38.0 30.5 0.1 2382837 chr3L 20525230 intron CG4825 - chr3L 21716648 intergenic not near genes chr3L 22908067 intergenic not near genes chr3L_4_21715001 chr3L_21715001 D17-c3 2150 chr3L 20525230 20525230 chr3L 24821491 24821494 6 4296263 23.0 25.0 24.0 0.2 4296264 chr3L 20525230 intron CG4825 - chr3L 22673362 intron CG14457 + chr3L 24821494 intergenic not near genes chr3L_6_22670001 chr3L_22670001 D17-c3 2151 chr3L 20590050 20590090 chr3L 20590614 20590654 412 15 563 7.5 4.0 5.8 2.2 604 chr3L 20590050 intergenic not near genes chr3L 20590352 intergenic not near genes chr3L 20590654 intergenic not near genes chr3L_15_20590001 chr3L_20590001 D17-c3 2152 chr3L 20590093 20590096 chr3L 20590612 20590660 412 4 551 5.5 4.0 4.8 0.7 567 chr3L 20590093 intergenic not near genes chr3L 20590376 intergenic not near genes chr3L 20590660 intergenic not near genes chr3L_4_20590001 chr3L_20590001 D17-c3 2153 chr3L 20821282 20821302 chr3L 20824776 20824796 NOF 5 3494 6.0 13.0 9.5 0.5 3514 chr3L 20821282 intron Pka-R1 + chr3L 20823039 intron Pka-R1 + chr3L 20824796 intron Pka-R1 + chr3L_5_20820001 chr3L_20820001 D17-c3 2154 chr3L 20849249 20849297 chr3L 20849353 20849401 15 104 5.0 6.0 5.5 2.3 152 chr3L 20849249 intron CG32432 - chr3L 20849325 intron CG32432 - chr3L 20849401 intron CG32432 - chr3L_15_20845001 chr3L_20845001 D17-c3 2155 chr3L 20858048 20858100 chr3L 20858172 20858224 13 124 2.5 5.5 4.0 2.6 176 chr3L 20858048 intron CG32432 - chr3L 20858136 intron CG32432 - chr3L 20858224 intron CG32432 - chr3L_13_20855001 chr3L_20855001 D17-c3 2156 chr3L 20913725 20913778 chr3L 20913830 20913885 20 104 5.0 7.5 6.2 2.8 160 chr3L 20913725 intergenic CR43930 - chr3L 20913805 intergenic CR43930 - chr3L 20913885 intergenic CR43930 - chr3L_20_20910001 chr3L_20910001 D17-c3 2157 chr3L 20917067 20917120 chr3L 20917169 20917222 29 102 7.5 6.0 6.8 3.7 155 chr3L 20917067 intergenic not near genes chr3L 20917144 intergenic not near genes chr3L 20917222 intergenic not near genes chr3L_29_20915001 chr3L_20915001 D17-c3 2158 chr3L 21010353 21010391 chr3L 21010485 21010524 10 132 7.0 3.0 5.0 1.7 171 chr3L 21010353 intron skd - chr3L 21010438 intron skd - chr3L 21010524 intron skd - chr3L_10_21010001 chr3L_21010001 D17-c3 2159 chr3L 21014901 21014947 chr3L 21023396 21023453 Tirant 43 8502 8.0 10.5 9.2 4.2 8552 chr3L 21014901 intron skd - chr3L 21019177 intron skd - chr3L 21023453 intron skd - chr3L_43_21015001 chr3L_21015001 D17-c3 2160 chr3L 21029916 21029958 chr3L 21030014 21030066 19 107 9.0 5.0 7.0 2.4 150 chr3L 21029916 3` UTR CG10585 + chr3L 21029991 3` UTR CG10585 + chr3L 21030066 3` UTR CG10585 + chr3L_19_21025001 chr3L_21025001 D17-c3 2161 chr3L 21106104 21106137 chr3L 21106243 21106276 16 138 6.0 9.0 7.5 1.9 172 chr3L 21106104 intron ko - chr3L 21106190 intron ko - chr3L 21106276 intron ko - chr3L_16_21105001 chr3L_21105001 D17-c3 2162 chr3L 21151841 21151897 chr3L 21156950 21157005 flea 22 5109 7.5 8.0 7.8 2.5 5164 chr3L 21151841 intron Ac78C - chr3L 21154423 intron Ac78C - chr3L 21157005 intron Ac78C - chr3L_22_21150001 chr3L_21150001 D17-c3 2163 chr3L 21232781 21232837 chr3L 21232934 21232990 25 153 8.0 5.0 6.5 3.3 209 chr3L 21232781 intron Eip78C + chr3L 21232886 intron Eip78C + chr3L 21232990 intron Eip78C + chr3L_25_21230001 chr3L_21230001 D17-c3 2164 chr3L 21243730 21243736 chr3L 21251312 21251314 412 4 7583 14.5 11.5 13.0 0.3 7584 chr3L 21243730 intron Eip78C + chr3L 21247522 intron Eip78C + chr3L 21251314 intron Eip78C + chr3L_4_21245001 chr3L_21245001 D17-c3 2165 chr3L 21243737 21243742 chr3L 21251310 21251330 412 5 7579 14.5 11.5 13.0 0.4 7593 chr3L 21243737 intron Eip78C + chr3L 21247534 intron Eip78C + chr3L 21251330 intron Eip78C + chr3L_5_21245001 chr3L_21245001 D17-c3 2166 chr3L 21243743 21243751 chr3L 21251309 21251329 412 6 7578 14.0 11.5 12.8 0.4 7586 chr3L 21243743 intron Eip78C + chr3L 21247536 intron Eip78C + chr3L 21251329 intron Eip78C + chr3L_6_21245001 chr3L_21245001 D17-c3 2167 chr3L 21301705 21301765 chr3L 21301816 21301876 28 110 4.5 5.0 4.8 4.8 171 chr3L 21301705 5` UTR CR45432 + chr3L 21301790 5` UTR,3` UTR CR45432 +,CG11309 - chr3L 21301876 5` UTR,3` UTR CR45432 +,CG11309 - chr3L_28_21300001 chr3L_21300001 D17-c3 2168 chr3L 21306123 21306176 chr3L 21315307 21315360 roo 16 9183 5.0 2.0 3.5 3.6 9237 chr3L 21306123 3` UTR CG7632 + chr3L 21310742 intron Pc - chr3L 21315360 3` UTR Pc - chr3L_16_21310001 chr3L_21310001 D17-c3 2169 chr3L 21319501 21319559 chr3L 21319616 21319674 31 114 5.5 3.5 4.5 5.6 173 chr3L 21319501 5` UTR Rab26 + chr3L 21319588 5` UTR Rab26 + chr3L 21319674 5` UTR Rab26 + chr3L_31_21315001 chr3L_21315001 D17-c3 2170 chr3L 21393201 21393259 chr3L 21393496 21393554 29 290 9.5 8.0 8.8 3.0 353 chr3L 21393201 intron rgn + chr3L 21393378 intron rgn + chr3L 21393554 intron rgn + chr3L_29_21390001 chr3L_21390001 D17-c3 2171 chr3L 21399430 21399447 chr3L 21399538 21399555 11 108 23.5 17.0 20.2 0.5 125 chr3L 21399430 intron rgn + chr3L 21399492 intron rgn + chr3L 21399555 intron rgn + chr3L_11_21395001 chr3L_21395001 D17-c3 2172 chr3L 21406971 21407028 chr3L 21407075 21407132 29 103 12.5 8.5 10.5 2.5 161 chr3L 21406971 intron rgn + chr3L 21407052 intron rgn + chr3L 21407132 intron rgn + chr3L_29_21405001 chr3L_21405001 D17-c3 2173 chr3L 21412734 21412779 chr3L 21412822 21412867 17 99 6.5 7.5 7.0 2.1 133 chr3L 21412734 intron rgn + chr3L 21412800 intron rgn + chr3L 21412867 intron rgn + chr3L_17_21410001 chr3L_21410001 D17-c3 2174 chr3L 21456753 21456804 chr3L 21456869 21456922 34 117 12.5 8.0 10.2 3.0 169 chr3L 21456753 intergenic not near genes chr3L 21456838 intergenic not near genes chr3L 21456922 intergenic not near genes chr3L_34_21455001 chr3L_21455001 D17-c3 2175 chr3L 21498826 21498842 chr3L 21500487 21500503 1360 6 1660 17.5 12.0 14.8 0.4 1677 chr3L 21498826 5` UTR,intron CR43933 +,Glg1 - chr3L 21499664 intron Glg1 - chr3L 21500503 intron Glg1 - chr3L_6_21495001 chr3L_21495001 D17-c3 2176 chr3L 21498843 21498864 chr3L 21500484 21500520 1360 11 1659 10.0 11.5 10.8 0.9 1677 chr3L 21498843 intron Glg1 - chr3L 21499682 intron Glg1 - chr3L 21500520 intron Glg1 - chr3L_11_21495001 chr3L_21495001 D17-c3 2177 chr3L 21639178 21639227 chr3L 21639282 21639331 28 103 3.5 11.0 7.2 3.4 153 chr3L 21639178 intergenic CG32444 +,CG32445 + chr3L 21639254 intergenic CG32445 +,CG32444 + chr3L 21639331 intergenic CG32445 +,CG32444 + chr3L_28_21635001 chr3L_21635001 D17-c3 2178 chr3L 21749292 21749337 chr3L 21754477 21754522 Doc 18 5179 18.5 7.0 12.8 1.3 5230 chr3L 21749292 intron Syn1 - chr3L 21751907 intron Syn1 - chr3L 21754522 intron Syn1 - chr3L_18_21750001 chr3L_21750001 D17-c3 2179 chr3L 21769031 21769087 chr3L 21769143 21769199 15 112 2.0 3.0 2.5 4.3 168 chr3L 21769031 intron,intron Syn1 -,CG42689 + chr3L 21769115 intron,intron Syn1 -,CG42689 + chr3L 21769199 intron,intron Syn1 -,CG42689 + chr3L_15_21765001 chr3L_21765001 D17-c3 2180 chr3L 21770016 21770038 chr3L 21770128 21770150 11 109 16.0 8.5 12.2 0.8 134 chr3L 21770016 5` UTR,intron,5` UTR Syn1 -,CG42689 +,CG7370 + chr3L 21770083 5` UTR,intron,intron Syn1 -,CG42689 +,CG7370 + chr3L 21770150 5` UTR,intron,intron Syn1 -,CG42689 +,CG7370 + chr3L_11_21770001 chr3L_21770001 D17-c3 2181 chr3L 21776669 21776701 chr3L 21776781 21776813 18 112 0.0 7.0 3.5 4.0 144 chr3L 21776669 intron,intron CG42689 +,CG42552 + chr3L 21776741 intron,intron CG42689 +,CG42552 + chr3L 21776813 intron,intron CG42689 +,CG42552 + chr3L_18_21775001 chr3L_21775001 D17-c3 2182 chr3L 21852230 21852284 chr3L 21852348 21852402 36 113 6.0 5.0 5.5 5.5 172 chr3L 21852230 intron mub + chr3L 21852316 intron mub + chr3L 21852402 intron mub + chr3L_36_21850001 chr3L_21850001 D17-c3 2183 chr3L 21854075 21854088 chr3L 21854177 21854190 9 102 8.5 5.0 6.8 1.2 115 chr3L 21854075 intron mub + chr3L 21854132 intron mub + chr3L 21854190 intron mub + chr3L_9_21850001 chr3L_21850001 D17-c3 2184 chr3L 21855220 21855273 chr3L 21855318 21855376 23 102 11.0 9.0 10.0 2.1 156 chr3L 21855220 intron mub + chr3L 21855298 intron mub + chr3L 21855376 intron mub + chr3L_23_21855001 chr3L_21855001 D17-c3 2185 chr3L 21871534 21871593 chr3L 21871647 21871700 33 112 9.0 10.0 9.5 3.1 166 chr3L 21871534 intron mub + chr3L 21871617 intron mub + chr3L 21871700 intron mub + chr3L_33_21870001 chr3L_21870001 D17-c3 2186 chr3L 22092789 22092827 chr3L 22092914 22092953 18 125 11.0 7.0 9.0 1.8 164 chr3L 22092789 intergenic not near genes chr3L 22092871 intergenic not near genes chr3L 22092953 intergenic not near genes chr3L_18_22090001 chr3L_22090001 D17-c3 2187 chr3L 22099653 22099665 chr3L 22105864 22105876 3S18 9 6211 15.0 4.5 9.8 0.8 6223 chr3L 22099653 intergenic not near genes chr3L 22102764 intergenic not near genes chr3L 22105876 intergenic not near genes chr3L_9_22100001 chr3L_22100001 D17-c3 2188 chr3L 22099670 22099703 chr3L 22105863 22105914 3S18 21 6207 7.5 4.5 6.0 3.0 6244 chr3L 22099670 intergenic not near genes chr3L 22102792 intergenic not near genes chr3L 22105914 intergenic not near genes chr3L_21_22100001 chr3L_22100001 D17-c3 2189 chr3L 22116173 22116179 chr3L 22116305 22116311 6 132 12.5 12.0 12.2 0.5 138 chr3L 22116173 intergenic not near genes chr3L 22116242 intergenic not near genes chr3L 22116311 intergenic not near genes chr3L_6_22115001 chr3L_22115001 D17-c3 2190 chr3L 22116180 22116192 chr3L 22116301 22116324 4 128 10.0 10.0 10.0 0.4 144 chr3L 22116180 intergenic not near genes chr3L 22116252 intergenic not near genes chr3L 22116324 intergenic not near genes chr3L_4_22115001 chr3L_22115001 D17-c3 2191 chr3L 22169429 22169489 chr3L 22169547 22169604 17 118 3.5 5.5 4.5 3.1 175 chr3L 22169429 intron olf413 + chr3L 22169516 intron olf413 + chr3L 22169604 intron olf413 + chr3L_17_22165001 chr3L_22165001 D17-c3 2192 chr3L 22231556 22231585 chr3L 22231671 22231700 13 115 9.5 14.0 11.8 1.0 144 chr3L 22231556 intron olf413 + chr3L 22231628 intron olf413 + chr3L 22231700 intron olf413 + chr3L_13_22230001 chr3L_22230001 D17-c3 2193 chr3L 22361918 22361967 chr3L 22362020 22362069 9 100 11.0 5.0 8.0 1.0 151 chr3L 22361918 intron Ten-m - chr3L 22361994 intron Ten-m - chr3L 22362069 intron Ten-m - chr3L_9_22360001 chr3L_22360001 D17-c3 2194 chr3L 22395576 22395628 chr3L 22395684 22395736 14 108 3.5 2.5 3.0 3.5 160 chr3L 22395576 intron Ten-m - chr3L 22395656 intron Ten-m - chr3L 22395736 intron Ten-m - chr3L_14_22395001 chr3L_22395001 D17-c3 2195 chr3L 22411360 22411399 chr3L 22411446 22411451 38 90 5.0 8.5 6.8 4.9 91 chr3L 22411360 intergenic not near genes chr3L 22411406 intergenic not near genes chr3L 22411451 intergenic not near genes chr3L_38_22410001 chr3L_22410001 D17-c3 2196 chr3L 22507099 22507154 chr3L 22507211 22507266 39 100 9.5 7.5 8.5 4.1 167 chr3L 22507099 intergenic not near genes chr3L 22507182 intergenic not near genes chr3L 22507266 intergenic not near genes chr3L_39_22505001 chr3L_22505001 D17-c3 2197 chr3L 22555743 22555794 chr3L 22563238 22563289 blood 28 7492 8.0 9.5 8.8 2.9 7546 chr3L 22555743 intergenic not near genes chr3L 22559516 intergenic not near genes chr3L 22563289 intergenic not near genes chr3L_28_22555001 chr3L_22555001 D17-c3 2198 chr3L 22570400 22570456 chr3L 22570569 22570625 28 169 5.0 7.0 6.0 4.0 225 chr3L 22570400 intergenic not near genes chr3L 22570512 intergenic not near genes chr3L 22570625 intergenic not near genes chr3L_28_22570001 chr3L_22570001 D17-c3 2199 chr3L 22577598 22577636 chr3L 22582411 22582449 Doc 26 4810 11.5 7.0 9.2 2.5 4851 chr3L 22577598 intergenic not near genes chr3L 22580024 intergenic not near genes chr3L 22582449 3` UTR CG14459 - chr3L_26_22580001 chr3L_22580001 D17-c3 2200 chr3L 22617169 22617221 chr3L 22624645 22624698 blood 19 7476 7.0 11.0 9.0 1.9 7529 chr3L 22617169 intron CG14459 - chr3L 22620934 intron CG14459 - chr3L 22624698 intron CG14459 - chr3L_19_22620001 chr3L_22620001 D17-c3 2201 chr3L 22630718 22630768 chr3L 22630822 22630867 18 102 8.0 9.5 8.8 1.8 149 chr3L 22630718 intron CG14459 - chr3L 22630792 intron CG14459 - chr3L 22630867 intron CG14459 - chr3L_18_22630001 chr3L_22630001 D17-c3 2202 chr3L 22652294 22652350 chr3L 22652457 22652513 39 162 5.0 7.5 6.2 5.4 219 chr3L 22652294 exon CG33772 - chr3L 22652404 intron CG33772 - chr3L 22652513 exon CG33772 - chr3L_39_22650001 chr3L_22650001 D17-c3 2203 chr3L 22761364 22761415 chr3L 22766823 22766874 Ivk 22 5459 8.0 4.5 6.2 3.1 5510 chr3L 22761364 intron SPoCk + chr3L 22764119 intron SPoCk + chr3L 22766874 intron SPoCk + chr3L_22_22760001 chr3L_22760001 D17-c3 2204 chr3L 22786066 22786115 chr3L 22788478 22788533 27 2413 30.5 52.0 41.2 0.6 2467 chr3L 22786066 3` UTR SPoCk + chr3L 22787300 3` UTR SPoCk + chr3L 22788533 exon CG14448 + chr3L_27_22785001 chr3L_22785001 D17-c3 2205 chr3L 22853443 22853444 chr3L 22853555 22853556 4 112 23.0 16.5 19.8 0.2 113 chr3L 22853443 5` UTR,5` UTR CR43426 +,CG32462 - chr3L 22853500 5` UTR,5` UTR CR43426 +,CG32462 - chr3L 22853556 5` UTR CR43426 + chr3L_4_22850001 chr3L_22850001 D17-c3 2206 chr3L 22853445 22853722 chr3L 22853551 22853833 49 111 8.0 14.5 11.2 4.0 388 chr3L 22853445 5` UTR,5` UTR CR43426 +,CG32462 - chr3L 22853639 5` UTR CR43426 + chr3L 22853833 5` UTR CR43426 + chr3L_49_22850001 chr3L_22850001 D17-c3 2207 chr3L 22855300 22855353 chr3L 22855408 22855456 28 107 9.0 8.5 8.8 2.9 156 chr3L 22855300 exon CG32459 - chr3L 22855378 exon CG32459 - chr3L 22855456 exon CG32459 - chr3L_28_22855001 chr3L_22855001 D17-c3 2208 chr3L 22865965 22866007 chr3L 22867121 22867165 Doc 10 1158 6.0 3.0 4.5 1.8 1200 chr3L 22865965 intron CG33170 + chr3L 22866565 intron CG33170 + chr3L 22867165 intron CG33170 + chr3L_10_22865001 chr3L_22865001 D17-c3 2209 chr3L 19220633 19220638 chr3L 22908066 22908066 191 3687432 26.5 38.0 32.2 5.8 3687433 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908066 intergenic not near genes chr3L_191_21060001 chr3L_21060001 D17-c3 2210 chr3L 19220633 19220637 chr3L 22908067 22908067 113 3687433 26.0 38.0 32.0 3.4 3687434 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908067 intergenic not near genes chr3L_113_21060001 chr3L_21060001 D17-c3 2211 chr3L 22989838 22989893 chr3L 22996837 22996892 297 29 6999 7.5 4.5 6.0 4.1 7054 chr3L 22989838 intergenic not near genes chr3L 22993365 intergenic not near genes chr3L 22996892 intergenic not near genes chr3L_29_22990001 chr3L_22990001 D17-c3 2212 chr3L 23042207 23042255 chr3L 23048985 23049033 gypsy6 28 6778 10.5 12.5 11.5 2.2 6826 chr3L 23042207 intergenic not near genes chr3L 23045620 intergenic not near genes chr3L 23049033 intergenic not near genes chr3L_28_23045001 chr3L_23045001 D17-c3 2213 chr3L 23055516 23055572 chr3L 23055685 23055741 18 164 7.0 7.0 7.0 2.2 225 chr3L 23055516 intergenic not near genes chr3L 23055628 intergenic not near genes chr3L 23055741 intergenic not near genes chr3L_18_23055001 chr3L_23055001 D17-c3 2214 chr3L 23062869 23062875 chr3L 25074004 25074010 Tirant 7 2011135 14.0 26.0 20.0 0.3 2011141 chr3L 23062869 intergenic not near genes chr3L 24068440 intergenic not near genes chr3L 25074010 intergenic not near genes chr3L_7_24065001 chr3L_24065001 D17-c3 2215 chr3L 23088263 23088317 chr3L 23088369 23088424 23 105 12.5 6.5 9.5 2.2 161 chr3L 23088263 intergenic not near genes chr3L 23088344 intergenic not near genes chr3L 23088424 intergenic not near genes chr3L_23_23085001 chr3L_23085001 D17-c3 2216 chr3L 23182801 23182848 chr3L 23182902 23182949 22 98 6.5 14.0 10.2 2.0 148 chr3L 23182801 intron CG34031 + chr3L 23182875 intron CG34031 + chr3L 23182949 intron CG34031 + chr3L_22_23180001 chr3L_23180001 D17-c3 2217 chr3L 23340905 23340943 chr3L 23341237 23341275 4 332 4.5 1.5 3.0 1.0 370 chr3L 23340905 intron CG32230 + chr3L 23341090 intron CG32230 + chr3L 23341275 intron CG32230 + chr3L_4_23340001 chr3L_23340001 D17-c3 2218 chr3L 23603158 23603180 chr3L 23603277 23603299 15 118 10.0 17.5 13.8 1.0 141 chr3L 23603158 intron AGO3 + chr3L 23603228 intron AGO3 + chr3L 23603299 intron AGO3 + chr3L_15_23600001 chr3L_23600001 D17-c3 2219 chr3L 23611207 23611210 chr3L 27363496 27363499 Gypsy12A_LTR 4 3752289 35.5 38.0 36.8 0.1 3752292 chr3L 23611207 intron AGO3 + chr3L 25487353 intron CG41343 - chr3L 27363499 intron Dbp80 + chr3L_4_25485001 chr3L_25485001 D17-c3 2220 chr3L 23823999 23824037 chr3L 23824437 23824475 11 438 5.5 4.5 5.0 1.8 476 chr3L 23823999 intergenic not near genes chr3L 23824237 intergenic not near genes chr3L 23824475 intergenic not near genes chr3L_11_23820001 chr3L_23820001 D17-c3 2221 chr3L 24012388 24012433 chr3L 24020754 24020799 roo 7 8366 2.5 3.5 3.0 1.8 8411 chr3L 24012388 intergenic not near genes chr3L 24016594 intergenic not near genes chr3L 24020799 intergenic not near genes chr3L_7_24015001 chr3L_24015001 D17-c3 2222 chr3L 24168761 24168821 chr3L 24176114 24176174 ZAM 55 7351 8.0 9.5 8.8 5.6 7413 chr3L 24168761 intron Snap25 + chr3L 24172468 intron Snap25 + chr3L 24176174 intron Snap25 + chr3L_55_24170001 chr3L_24170001 D17-c3 2223 chr3L 24791877 24791912 chr3L 24796681 24796716 Doc 7 4804 5.5 5.5 5.5 1.1 4839 chr3L 24791877 intergenic not near genes chr3L 24794296 intergenic not near genes chr3L 24796716 intergenic not near genes chr3L_7_24790001 chr3L_24790001 D17-c3 2224 chr3L 24811049 24811051 chr3L 24821492 24821494 mdg1 4 10443 26.5 25.0 25.8 0.1 10445 chr3L 24811049 intergenic not near genes chr3L 24816272 intergenic not near genes chr3L 24821494 intergenic not near genes chr3L_4_24815001 chr3L_24815001 D17-c3 2225 chr3L 20525228 20525229 chr3L 24821493 24821494 4 4296265 23.0 25.0 24.0 0.2 4296266 chr3L 20525228 intron CG4825 - chr3L 22673361 intron CG14457 + chr3L 24821494 intergenic not near genes chr3L_4_22670001 chr3L_22670001 D17-c3 2226 chr3L 24892799 24892834 chr3L 24893005 24893040 9 206 10.0 5.0 7.5 1.1 241 chr3L 24892799 intergenic not near genes chr3L 24892920 intergenic not near genes chr3L 24893040 intergenic not near genes chr3L_9_24890001 chr3L_24890001 D17-c3 2227 chr3L 25331619 25331629 chr3L 25331735 25331745 11 115 20.0 21.5 20.8 0.5 126 chr3L 25331619 intergenic not near genes chr3L 25331682 intergenic not near genes chr3L 25331745 intergenic not near genes chr3L_11_25330001 chr3L_25330001 D17-c3 2228 chr3L 25331633 25331649 chr3L 25331730 25331765 9 108 14.0 18.5 16.2 0.5 132 chr3L 25331633 intergenic not near genes chr3L 25331699 intergenic not near genes chr3L 25331765 intergenic not near genes chr3L_9_25330001 chr3L_25330001 D17-c3 2229 chr3L 26026697 26026709 chr3L 26026812 26026823 8 115 60.5 54.5 57.5 0.1 126 chr3L 26026697 intergenic not near genes chr3L 26026760 intergenic not near genes chr3L 26026823 intergenic not near genes chr3L_8_26025001 chr3L_26025001 D17-c3 2230 chr3L 23311678 23311683 chr3L 26026738 26026743 G6 6 2715060 48.0 59.0 53.5 0.1 2715065 chr3L 23311678 intergenic not near genes chr3L 24669210 intergenic not near genes chr3L 26026743 intergenic not near genes chr3L_6_24665001 chr3L_24665001 D17-c3 2231 chr3L 26290081 26290126 chr3L 26290277 26290315 12 195 8.5 14.0 11.2 1.0 234 chr3L 26290081 intergenic not near genes chr3L 26290198 intergenic not near genes chr3L 26290315 intergenic not near genes chr3L_12_26290001 chr3L_26290001 D17-c3 2232 chr3L 23941245 23941246 chr3L 26882299 26882300 1360 4 2941054 18.5 1.0 9.8 0.4 2941055 chr3L 23941245 intron CG40470 - chr3L 25411772 intergenic not near genes chr3L 26882300 intergenic not near genes chr3L_4_25410001 chr3L_25410001 D17-c3 2233 chr3L 27390435 27390712 chr3L 27390681 27390816 36 104 57.0 48.5 52.8 0.7 381 chr3L 27390435 intron Dbp80 + chr3L 27390626 intron Dbp80 + chr3L 27390816 intron Dbp80 + chr3L_36_27390001 chr3L_27390001 D17-c3 2234 chr3L 27716909 27716957 chr3L 27717015 27717063 9 106 4.0 8.5 6.2 1.2 154 chr3L 27716909 intergenic not near genes chr3L 27716986 intergenic not near genes chr3L 27717063 intergenic not near genes chr3L_9_27715001 chr3L_27715001 D17-c3 2235 chr3R 98954 98955 chr3R 109521 109522 4 10567 12.5 3.5 8.0 0.4 10568 chr3R 98954 intergenic not near genes chr3R 104238 intergenic not near genes chr3R 109522 intergenic not near genes chr3R_4_100001 chr3R_100001 D17-c3 2236 chr3R 803352 803407 chr3R 803485 803540 11 132 4.5 11.5 8.0 1.2 188 chr3R 803352 intergenic not near genes chr3R 803446 intergenic not near genes chr3R 803540 intergenic not near genes chr3R_11_800001 chr3R_800001 D17-c3 2237 chr3R 1521170 1521180 chr3R 1521268 1521293 6 110 40.0 35.5 37.8 0.2 123 chr3R 1521170 intergenic not near genes chr3R 1521232 intergenic not near genes chr3R 1521293 intergenic not near genes chr3R_6_1520001 chr3R_1520001 D17-c3 2238 chr3R 1511854 1511859 chr3R 2516748 2516753 297 4 1004894 22.0 52.5 37.2 0.1 1004899 chr3R 1511854 intergenic not near genes chr3R 2014304 intergenic not near genes chr3R 2516753 intergenic not near genes chr3R_4_2010001 chr3R_2010001 D17-c3 2239 chr3R 2534110 2534160 chr3R 2541704 2541753 38 7589 47.0 35.0 41.0 0.9 7643 chr3R 2534110 intergenic not near genes chr3R 2537932 intergenic not near genes chr3R 2541753 intergenic not near genes chr3R_38_2535001 chr3R_2535001 D17-c3 2240 chr3R 2556454 2556505 chr3R 2556569 2556618 14 114 4.5 3.0 3.8 2.9 164 chr3R 2556454 intron CG41056 - chr3R 2556536 intron CG41056 - chr3R 2556618 intron CG41056 - chr3R_14_2555001 chr3R_2555001 D17-c3 2241 chr3R 2556881 2556934 chr3R 2557589 2557642 19 708 50.5 35.5 43.0 0.4 761 chr3R 2556881 intron CG41056 - chr3R 2557262 intron CG41056 - chr3R 2557642 intron CG41056 - chr3R_19_2555001 chr3R_2555001 D17-c3 2242 chr3R 4063796 4063805 chr3R 4069101 4069110 8 5305 10.0 15.5 12.8 0.6 5314 chr3R 4063796 intergenic not near genes chr3R 4066453 intergenic not near genes chr3R 4069110 intergenic not near genes chr3R_8_4065001 chr3R_4065001 D17-c3 2243 chr3R 3989295 3989307 chr3R 4068939 4068951 mdg1 9 79644 34.5 13.0 23.8 0.4 79656 chr3R 3989295 intergenic not near genes chr3R 4029123 intergenic not near genes chr3R 4068951 intergenic not near genes chr3R_9_4025001 chr3R_4025001 D17-c3 2244 chr3R 4105019 4105059 chr3R 4110246 4110288 copia 5 5227 8.5 7.5 8.0 0.6 5269 chr3R 4105019 intergenic not near genes chr3R 4107654 intergenic not near genes chr3R 4110288 intergenic not near genes chr3R_5_4105001 chr3R_4105001 D17-c3 2245 chr3R 4206046 4206092 chr3R 4211646 4211692 mdg3 7 5600 9.5 3.5 6.5 0.9 5646 chr3R 4206046 intron CG14636 - chr3R 4208869 intron CG14636 - chr3R 4211692 intron CG14636 - chr3R_7_4205001 chr3R_4205001 D17-c3 2246 chr3R 4366736 4366787 chr3R 4375144 4375195 roo 16 8408 6.0 4.5 5.2 2.6 8459 chr3R 4366736 3` UTR CG1090 + chr3R 4370966 intergenic not near genes chr3R 4375195 5` UTR CR44922 + chr3R_16_4370001 chr3R_4370001 D17-c3 2247 chr3R 4408388 4408435 chr3R 4412717 4412764 Juan 18 4329 5.5 6.5 6.0 2.6 4376 chr3R 4408388 intron CG32944 - chr3R 4410576 intron CG32944 - chr3R 4412764 intron CG32944 - chr3R_18_4410001 chr3R_4410001 D17-c3 2248 chr3R 4454166 4454209 chr3R 4454269 4454312 17 103 6.5 8.0 7.2 2.1 146 chr3R 4454166 intron,5` UTR CG31522 -,CR43629 + chr3R 4454239 intron,5` UTR CG31522 -,CR43629 + chr3R 4454312 intron CG31522 - chr3R_17_4450001 chr3R_4450001 D17-c3 2249 chr3R 4657266 4657282 chr3R 4657380 4657396 6 114 14.5 5.5 10.0 0.5 130 chr3R 4657266 intron spartin + chr3R 4657331 intron spartin + chr3R 4657396 intron spartin + chr3R_6_4655001 chr3R_4655001 D17-c3 2250 chr3R 4657285 4657317 chr3R 4657376 4657431 11 112 6.0 5.5 5.8 1.6 146 chr3R 4657285 intron spartin + chr3R 4657358 intron spartin + chr3R 4657431 intron spartin + chr3R_11_4655001 chr3R_4655001 D17-c3 2251 chr3R 4665057 4665107 chr3R 4665159 4665212 18 105 8.0 8.5 8.2 2.0 155 chr3R 4665057 intron CG43427 + chr3R 4665134 intron CG43427 + chr3R 4665212 intron CG43427 + chr3R_18_4665001 chr3R_4665001 D17-c3 2252 chr3R 4683154 4683210 chr3R 4684938 4684994 S-element 29 1784 4.5 8.5 6.5 3.9 1840 chr3R 4683154 intron CG43427 + chr3R 4684074 intron CG43427 + chr3R 4684994 intron CG43427 + chr3R_29_4680001 chr3R_4680001 D17-c3 2253 chr3R 4699059 4699115 chr3R 4699448 4699504 22 389 7.0 3.5 5.2 3.5 445 chr3R 4699059 intron CG43427 + chr3R 4699282 intron CG43427 + chr3R 4699504 intron CG43427 + chr3R_22_4695001 chr3R_4695001 D17-c3 2254 chr3R 4719449 4719496 chr3R 4719681 4719729 16 233 3.5 7.0 5.2 2.6 280 chr3R 4719449 intergenic Nep2 -,CR44923 - chr3R 4719589 3` UTR Nep2 - chr3R 4719729 3` UTR Nep2 - chr3R_16_4715001 chr3R_4715001 D17-c3 2255 chr3R 4753223 4753238 chr3R 4757551 4757566 F-element 7 4328 21.0 19.0 20.0 0.3 4343 chr3R 4753223 intron,intron atms +,CG44098 - chr3R 4755394 intron,intron atms +,CG44098 - chr3R 4757566 intron,exon atms +,CG44098 - chr3R_7_4755001 chr3R_4755001 D17-c3 2256 chr3R 4753241 4753262 chr3R 4757547 4757590 F-element 22 4325 13.5 18.0 15.8 1.3 4349 chr3R 4753241 intron,intron atms +,CG44098 - chr3R 4755416 intron,intron atms +,CG44098 - chr3R 4757590 intron,exon atms +,CG44098 - chr3R_22_4755001 chr3R_4755001 D17-c3 2257 chr3R 4769133 4769190 chr3R 4769236 4769293 33 103 11.0 6.0 8.5 3.5 160 chr3R 4769133 intron,intron atms +,CG44098 - chr3R 4769213 intron,intron atms +,CG44098 - chr3R 4769293 intron,intron atms +,CG44098 - chr3R_33_4765001 chr3R_4765001 D17-c3 2258 chr3R 4784518 4784574 chr3R 4791366 4791422 30 6851 92.0 98.0 95.0 0.3 6904 chr3R 4784518 exon CG17387 - chr3R 4787970 exon ctrip - chr3R 4791422 exon ctrip - chr3R_30_4785001 chr3R_4785001 D17-c3 2259 chr3R 4802101 4802108 chr3R 4802289 4802302 8 192 16.0 12.5 14.2 0.5 201 chr3R 4802101 intron ctrip - chr3R 4802202 intron ctrip - chr3R 4802302 intron ctrip - chr3R_8_4800001 chr3R_4800001 D17-c3 2260 chr3R 4887453 4887504 chr3R 4894855 4894906 rover 24 7400 7.5 7.0 7.2 2.9 7453 chr3R 4887453 intergenic not near genes chr3R 4891180 intergenic not near genes chr3R 4894906 intergenic not near genes chr3R_24_4890001 chr3R_4890001 D17-c3 2261 chr3R 4922318 4922363 chr3R 4922422 4922467 20 104 6.0 10.0 8.0 2.2 149 chr3R 4922318 intron Cdep + chr3R 4922392 intron Cdep + chr3R 4922467 intron Cdep + chr3R_20_4920001 chr3R_4920001 D17-c3 2262 chr3R 4943588 4943623 chr3R 4943718 4943751 8 128 9.0 3.0 6.0 1.1 163 chr3R 4943588 intron Cdep + chr3R 4943670 intron Cdep + chr3R 4943751 intron Cdep + chr3R_8_4940001 chr3R_4940001 D17-c3 2263 chr3R 4964188 4964245 chr3R 4964321 4964378 32 133 8.0 9.0 8.5 3.4 190 chr3R 4964188 intergenic not near genes chr3R 4964283 intergenic not near genes chr3R 4964378 intergenic not near genes chr3R_32_4960001 chr3R_4960001 D17-c3 2264 chr3R 4965982 4966031 chr3R 4966098 4966148 12 117 6.5 2.0 4.2 2.3 166 chr3R 4965982 intron CG1124 + chr3R 4966065 intron CG1124 + chr3R 4966148 intron CG1124 + chr3R_12_4965001 chr3R_4965001 D17-c3 2265 chr3R 4975909 4975960 chr3R 4976035 4976086 12 123 9.5 5.5 7.5 1.4 177 chr3R 4975909 intergenic not near genes chr3R 4975998 intergenic not near genes chr3R 4976086 intergenic not near genes chr3R_12_4975001 chr3R_4975001 D17-c3 2266 chr3R 5045823 5045874 chr3R 5052945 5053001 HMS-Beagle 19 7126 7.0 5.0 6.0 2.7 7178 chr3R 5045823 3` UTR CR43635 - chr3R 5049412 intergenic not near genes chr3R 5053001 intergenic CR45588 - chr3R_19_5045001 chr3R_5045001 D17-c3 2267 chr3R 5057748 5057795 chr3R 5057964 5058011 24 216 10.0 6.0 8.0 2.7 263 chr3R 5057748 intergenic not near genes chr3R 5057880 intergenic not near genes chr3R 5058011 intergenic not near genes chr3R_24_5055001 chr3R_5055001 D17-c3 2268 chr3R 5067962 5068014 chr3R 5073499 5073556 mdg3 32 5542 7.0 7.0 7.0 4.0 5594 chr3R 5067962 intergenic not near genes chr3R 5070759 intergenic not near genes chr3R 5073556 intergenic not near genes chr3R_32_5070001 chr3R_5070001 D17-c3 2269 chr3R 5114886 5114945 chr3R 5115012 5115061 28 126 10.5 7.5 9.0 2.8 175 chr3R 5114886 intergenic not near genes chr3R 5114974 intergenic not near genes chr3R 5115061 intergenic not near genes chr3R_28_5110001 chr3R_5110001 D17-c3 2270 chr3R 5142269 5142321 chr3R 5142377 5142429 35 108 6.5 7.5 7.0 4.4 160 chr3R 5142269 intergenic not near genes chr3R 5142349 intergenic not near genes chr3R 5142429 intergenic not near genes chr3R_35_5140001 chr3R_5140001 D17-c3 2271 chr3R 5146171 5146220 chr3R 5147670 5147719 15 1499 12.5 27.5 20.0 0.7 1548 chr3R 5146171 intergenic not near genes chr3R 5146945 intergenic not near genes chr3R 5147719 intergenic not near genes chr3R_15_5145001 chr3R_5145001 D17-c3 2272 chr3R 5158120 5158176 chr3R 5158238 5158294 32 118 4.0 14.0 9.0 3.2 174 chr3R 5158120 intron dpr16 + chr3R 5158207 intron dpr16 + chr3R 5158294 intron dpr16 + chr3R_32_5155001 chr3R_5155001 D17-c3 2273 chr3R 5191364 5191423 chr3R 5191615 5191674 25 256 63.5 61.0 62.2 0.4 310 chr3R 5191364 intron cno - chr3R 5191519 intron cno - chr3R 5191674 intron cno - chr3R_25_5190001 chr3R_5190001 D17-c3 2274 chr3R 5205122 5205135 chr3R 5205239 5205252 7 117 5.5 8.0 6.8 0.9 130 chr3R 5205122 intron cno - chr3R 5205187 intron cno - chr3R 5205252 intron cno - chr3R_7_5205001 chr3R_5205001 D17-c3 2275 chr3R 5278067 5278120 chr3R 5278173 5278220 19 105 6.5 5.5 6.0 2.7 153 chr3R 5278067 intron mtd - chr3R 5278144 intron mtd - chr3R 5278220 intron mtd - chr3R_19_5275001 chr3R_5275001 D17-c3 2276 chr3R 5338377 5338422 chr3R 5343579 5343624 Rt1c 31 5202 12.5 20.5 16.5 1.8 5247 chr3R 5338377 intron mtd - chr3R 5341000 intron mtd - chr3R 5343624 intron mtd - chr3R_31_5340001 chr3R_5340001 D17-c3 2277 chr3R 5353113 5353151 chr3R 5353219 5353257 23 102 16.5 10.0 13.2 1.6 144 chr3R 5353113 intergenic not near genes chr3R 5353185 intergenic not near genes chr3R 5353257 intergenic CG11999 - chr3R_23_5350001 chr3R_5350001 D17-c3 2278 chr3R 5353155 5353163 chr3R 5353216 5353218 4 80 12.0 9.5 10.8 0.3 63 chr3R 5353155 intergenic not near genes chr3R 5353186 intergenic not near genes chr3R 5353218 intergenic CG11999 - chr3R_4_5350001 chr3R_5350001 D17-c3 2279 chr3R 5385953 5386004 chr3R 5386144 5386200 30 193 8.0 5.5 6.8 3.8 247 chr3R 5385953 intron kkv - chr3R 5386076 intron kkv - chr3R 5386200 intron kkv - chr3R_30_5385001 chr3R_5385001 D17-c3 2280 chr3R 5445936 5445988 chr3R 5452421 5452473 Burdock 18 6485 7.5 4.0 5.8 2.6 6537 chr3R 5445936 intron CG14669 + chr3R 5449204 intron CG14669 + chr3R 5452473 intron CG14669 + chr3R_18_5445001 chr3R_5445001 D17-c3 2281 chr3R 5593391 5593449 chr3R 5593502 5593560 20 108 11.5 8.0 9.8 1.9 169 chr3R 5593391 3` UTR Vha26 + chr3R 5593476 3` UTR Vha26 + chr3R 5593560 3` UTR Vha26 + chr3R_20_5590001 chr3R_5590001 D17-c3 2282 chr3R 5626994 5627039 chr3R 5627135 5627180 6 141 2.5 3.5 3.0 1.5 186 chr3R 5626994 intergenic not near genes chr3R 5627087 intergenic not near genes chr3R 5627180 intergenic not near genes chr3R_6_5625001 chr3R_5625001 D17-c3 2283 chr3R 5654444 5654499 chr3R 5654549 5654604 29 105 5.0 5.0 5.0 4.8 160 chr3R 5654444 intron elm - chr3R 5654524 intron elm - chr3R 5654604 intron elm - chr3R_29_5650001 chr3R_5650001 D17-c3 2284 chr3R 5665414 5665463 chr3R 5665554 5665603 34 136 6.5 16.5 11.5 2.7 189 chr3R 5665414 3` UTR Xe7 - chr3R 5665508 3` UTR Xe7 - chr3R 5665603 3` UTR Xe7 - chr3R_34_5665001 chr3R_5665001 D17-c3 2285 chr3R 5726070 5726121 chr3R 5726257 5726308 15 187 2.5 5.0 3.8 3.1 238 chr3R 5726070 intergenic not near genes chr3R 5726189 intergenic not near genes chr3R 5726308 intergenic not near genes chr3R_15_5725001 chr3R_5725001 D17-c3 2286 chr3R 5745999 5746046 chr3R 5746265 5746312 pogo 24 266 3.5 11.0 7.2 2.9 313 chr3R 5745999 3` UTR Madm + chr3R 5746156 3` UTR Madm + chr3R 5746312 3` UTR Madm + chr3R_24_5745001 chr3R_5745001 D17-c3 2287 chr3R 5746990 5747035 chr3R 5753206 5753251 diver 10 6216 4.0 4.0 4.0 2.0 6261 chr3R 5746990 intergenic Madm + chr3R 5750120 intergenic not near genes chr3R 5753251 intergenic CG2091 - chr3R_10_5750001 chr3R_5750001 D17-c3 2288 chr3R 5770799 5770843 chr3R 5771037 5771081 21 237 12.0 6.5 9.2 2.1 282 chr3R 5770799 intron CG2082 - chr3R 5770940 intron CG2082 - chr3R 5771081 intron CG2082 - chr3R_21_5770001 chr3R_5770001 D17-c3 2289 chr3R 5772350 5772408 chr3R 5772533 5772591 26 183 8.0 4.0 6.0 3.7 241 chr3R 5772350 intron CG2082 - chr3R 5772470 intron CG2082 - chr3R 5772591 intron CG2082 - chr3R_26_5770001 chr3R_5770001 D17-c3 2290 chr3R 5800046 5800086 chr3R 5800376 5800416 11 330 3.5 10.0 6.8 1.4 370 chr3R 5800046 intergenic CG10979 + chr3R 5800231 intergenic CG10979 + chr3R 5800416 intergenic CG10979 + chr3R_11_5800001 chr3R_5800001 D17-c3 2291 chr3R 5809087 5809140 chr3R 5809353 5809406 pogo 22 266 5.0 6.0 5.5 3.4 319 chr3R 5809087 3` UTR CG11000 + chr3R 5809246 3` UTR CG11000 + chr3R 5809406 3` UTR CG11000 + chr3R_22_5805001 chr3R_5805001 D17-c3 2292 chr3R 5822358 5822405 chr3R 5823550 5823597 1360 20 1192 8.5 12.5 10.5 1.7 1239 chr3R 5822358 3` UTR CG2023 - chr3R 5822978 3` UTR CG2023 - chr3R 5823597 3` UTR CG2023 - chr3R_20_5820001 chr3R_5820001 D17-c3 2293 chr3R 5836179 5836181 chr3R 5836308 5836310 4 129 19.5 19.5 19.5 0.2 131 chr3R 5836179 intron CG1208 + chr3R 5836244 intron CG1208 + chr3R 5836310 intron CG1208 + chr3R_4_5835001 chr3R_5835001 D17-c3 2294 chr3R 5927559 5927590 chr3R 5927799 5927845 pogo 19 252 12.0 7.0 9.5 1.8 286 chr3R 5927559 intron CG34113 - chr3R 5927702 intron CG34113 - chr3R 5927845 intron CG34113 - chr3R_19_5925001 chr3R_5925001 D17-c3 2295 chr3R 5931831 5931854 chr3R 5931932 5931955 4 99 11.0 3.0 7.0 0.5 124 chr3R 5931831 intron CG34113 - chr3R 5931893 intron CG34113 - chr3R 5931955 intron CG34113 - chr3R_4_5930001 chr3R_5930001 D17-c3 2296 chr3R 5931856 5931873 chr3R 5931927 5931961 8 88 9.0 2.5 5.8 1.2 105 chr3R 5931856 intron CG34113 - chr3R 5931908 intron CG34113 - chr3R 5931961 intron CG34113 - chr3R_8_5930001 chr3R_5930001 D17-c3 2297 chr3R 5965647 5965690 chr3R 5965787 5965830 17 140 7.5 9.0 8.2 1.8 183 chr3R 5965647 intergenic CR44925 + chr3R 5965738 intergenic CR44925 + chr3R 5965830 5` UTR CR44925 + chr3R_17_5965001 chr3R_5965001 D17-c3 2298 chr3R 5981035 5981044 chr3R 5981135 5981142 5 104 17.0 7.5 12.2 0.4 107 chr3R 5981035 intergenic not near genes chr3R 5981088 intergenic not near genes chr3R 5981142 intergenic not near genes chr3R_5_5980001 chr3R_5980001 D17-c3 2299 chr3R 6015565 6015581 chr3R 6015666 6015683 16 102 3.5 17.0 10.2 1.4 118 chr3R 6015565 intergenic not near genes chr3R 6015624 intergenic not near genes chr3R 6015683 intergenic not near genes chr3R_16_6015001 chr3R_6015001 D17-c3 2300 chr3R 6015948 6015995 chr3R 6024447 6024521 Tirant 27 8523 5.5 3.5 4.5 4.9 8573 chr3R 6015948 intergenic not near genes chr3R 6020234 intergenic not near genes chr3R 6024521 intergenic not near genes chr3R_27_6020001 chr3R_6020001 D17-c3 2301 chr3R 6039767 6039790 chr3R 6040668 6040690 4 901 14.0 11.5 12.8 0.3 923 chr3R 6039767 intergenic not near genes chr3R 6040228 intergenic not near genes chr3R 6040690 intergenic not near genes chr3R_4_6040001 chr3R_6040001 D17-c3 2302 chr3R 6059844 6059855 chr3R 6059955 6059966 4 111 14.0 9.5 11.8 0.3 122 chr3R 6059844 intergenic not near genes chr3R 6059905 intergenic not near genes chr3R 6059966 intergenic not near genes chr3R_4_6055001 chr3R_6055001 D17-c3 2303 chr3R 6059859 6059900 chr3R 6059954 6060011 31 105 6.5 8.5 7.5 3.6 152 chr3R 6059859 intergenic not near genes chr3R 6059935 intergenic not near genes chr3R 6060011 intergenic not near genes chr3R_31_6055001 chr3R_6055001 D17-c3 2304 chr3R 6120997 6121050 chr3R 6121098 6121151 19 101 6.5 2.5 4.5 3.5 154 chr3R 6120997 intergenic not near genes chr3R 6121074 intergenic not near genes chr3R 6121151 intergenic not near genes chr3R_19_6120001 chr3R_6120001 D17-c3 2305 chr3R 6121164 6121178 chr3R 6121407 6121421 BS 5 243 0.0 6.0 3.0 1.2 257 chr3R 6121164 intergenic not near genes chr3R 6121292 intergenic not near genes chr3R 6121421 intergenic not near genes chr3R_5_6120001 chr3R_6120001 D17-c3 2306 chr3R 6146890 6146946 chr3R 6147067 6147123 21 177 6.0 3.0 4.5 3.8 233 chr3R 6146890 intergenic not near genes chr3R 6147006 intergenic not near genes chr3R 6147123 intergenic not near genes chr3R_21_6145001 chr3R_6145001 D17-c3 2307 chr3R 6158489 6158540 chr3R 6167097 6167148 Tirant 14 8608 6.5 5.5 6.0 2.0 8659 chr3R 6158489 intergenic not near genes chr3R 6162818 intergenic not near genes chr3R 6167148 intergenic CG1077 + chr3R_14_6160001 chr3R_6160001 D17-c3 2308 chr3R 6175152 6175200 chr3R 6182449 6182497 HMS-Beagle2 23 7292 4.5 5.0 4.8 4.0 7345 chr3R 6175152 intergenic Osi1 + chr3R 6178824 intron CR45194 + chr3R 6182497 intergenic CR45194 + chr3R_23_6175001 chr3R_6175001 D17-c3 2309 chr3R 6206265 6206284 chr3R 6206507 6206526 BS 14 242 21.0 12.0 16.5 0.8 261 chr3R 6206265 exon Osi24 + chr3R 6206396 intron Osi24 + chr3R 6206526 intron Osi24 + chr3R_14_6205001 chr3R_6205001 D17-c3 2310 chr3R 6206286 6206316 chr3R 6206498 6206553 BS 17 240 8.5 9.0 8.8 1.7 267 chr3R 6206286 exon Osi24 + chr3R 6206420 intron Osi24 + chr3R 6206553 intron Osi24 + chr3R_17_6205001 chr3R_6205001 D17-c3 2311 chr3R 6216984 6216998 chr3R 6217245 6217264 6 264 6.5 6.5 6.5 0.8 280 chr3R 6216984 intron Osi3 + chr3R 6217124 intron Osi3 + chr3R 6217264 intron Osi3 + chr3R_6_6215001 chr3R_6215001 D17-c3 2312 chr3R 6217003 6217032 chr3R 6217240 6217298 12 264 2.0 4.5 3.2 2.9 295 chr3R 6217003 intron Osi3 + chr3R 6217150 intron Osi3 + chr3R 6217298 intron Osi3 + chr3R_12_6215001 chr3R_6215001 D17-c3 2313 chr3R 6428784 6428828 chr3R 6428911 6428954 18 127 8.0 5.0 6.5 2.4 170 chr3R 6428784 intron gpp + chr3R 6428869 intron gpp + chr3R 6428954 intron gpp + chr3R_18_6425001 chr3R_6425001 D17-c3 2314 chr3R 6461575 6461613 chr3R 6461680 6461718 10 104 2.5 6.0 4.2 1.9 143 chr3R 6461575 intergenic not near genes chr3R 6461646 intergenic not near genes chr3R 6461718 intergenic not near genes chr3R_10_6460001 chr3R_6460001 D17-c3 2315 chr3R 6508765 6508822 chr3R 6508870 6508927 21 104 6.0 6.0 6.0 3.0 162 chr3R 6508765 intergenic not near genes chr3R 6508846 intergenic not near genes chr3R 6508927 intergenic not near genes chr3R_21_6505001 chr3R_6505001 D17-c3 2316 chr3R 6510001 6510051 chr3R 6515107 6515157 jockey 16 5105 7.0 3.5 5.2 2.6 5156 chr3R 6510001 intergenic not near genes chr3R 6512579 intergenic not near genes chr3R 6515157 intergenic not near genes chr3R_16_6510001 chr3R_6510001 D17-c3 2317 chr3R 6526325 6526375 chr3R 6526539 6526592 22 216 2.5 3.5 3.0 5.5 267 chr3R 6526325 intergenic not near genes chr3R 6526458 intergenic not near genes chr3R 6526592 intergenic not near genes chr3R_22_6525001 chr3R_6525001 D17-c3 2318 chr3R 6550297 6550350 chr3R 6550403 6550456 17 106 5.5 5.5 5.5 2.6 159 chr3R 6550297 intron dpr11 - chr3R 6550376 intron dpr11 - chr3R 6550456 intron dpr11 - chr3R_17_6550001 chr3R_6550001 D17-c3 2319 chr3R 6624234 6624280 chr3R 6624341 6624387 11 107 3.5 2.5 3.0 2.8 153 chr3R 6624234 intergenic not near genes chr3R 6624310 intergenic not near genes chr3R 6624387 intergenic not near genes chr3R_11_6620001 chr3R_6620001 D17-c3 2320 chr3R 6639886 6639912 chr3R 6639989 6640015 10 102 16.0 1.0 8.5 1.1 129 chr3R 6639886 intergenic not near genes chr3R 6639950 intergenic not near genes chr3R 6640015 intergenic not near genes chr3R_10_6635001 chr3R_6635001 D17-c3 2321 chr3R 6640590 6640648 chr3R 6640691 6640749 18 101 4.5 5.5 5.0 3.0 159 chr3R 6640590 intergenic not near genes chr3R 6640670 intergenic not near genes chr3R 6640749 intergenic CG31286 + chr3R_18_6640001 chr3R_6640001 D17-c3 2322 chr3R 6643517 6643573 chr3R 6643644 6643700 24 127 6.5 10.0 8.2 2.6 183 chr3R 6643517 intron CG1315 - chr3R 6643608 intron CG1315 - chr3R 6643700 intron CG1315 - chr3R_24_6640001 chr3R_6640001 D17-c3 2323 chr3R 6664957 6664962 chr3R 6665126 6665131 6 169 15.0 8.0 11.5 0.5 174 chr3R 6664957 intron lab - chr3R 6665044 intron lab - chr3R 6665131 intron lab - chr3R_6_6665001 chr3R_6665001 D17-c3 2324 chr3R 6705663 6705716 chr3R 6705912 6705965 16 249 1.0 3.5 2.2 5.0 302 chr3R 6705663 intergenic not near genes chr3R 6705814 intergenic not near genes chr3R 6705965 intergenic not near genes chr3R_16_6705001 chr3R_6705001 D17-c3 2325 chr3R 6737477 6737529 chr3R 6739289 6739310 Doc 21 1806 5.0 11.5 8.2 2.3 1833 chr3R 6737477 intron pb - chr3R 6738394 intron pb - chr3R 6739310 intron pb - chr3R_21_6735001 chr3R_6735001 D17-c3 2326 chr3R 6751709 6751753 chr3R 6752110 6752114 7 395 10.5 7.5 9.0 0.7 405 chr3R 6751709 intergenic not near genes chr3R 6751912 intergenic not near genes chr3R 6752114 intergenic not near genes chr3R_7_6750001 chr3R_6750001 D17-c3 2327 chr3R 6856358 6856400 chr3R 6856500 6856542 22 142 2.0 4.0 3.0 5.5 184 chr3R 6856358 intergenic not near genes chr3R 6856450 intergenic not near genes chr3R 6856542 intergenic not near genes chr3R_22_6855001 chr3R_6855001 D17-c3 2328 chr3R 6879044 6879097 chr3R 6879333 6879386 25 289 6.5 9.0 7.8 2.8 342 chr3R 6879044 intron CR44931 - chr3R 6879215 intron CR44931 - chr3R 6879386 intron CR44931 - chr3R_25_6875001 chr3R_6875001 D17-c3 2329 chr3R 6893275 6893328 chr3R 6893434 6893487 46 158 13.5 14.0 13.8 3.1 212 chr3R 6893275 3` UTR CR45559 - chr3R 6893381 3` UTR CR45559 - chr3R 6893487 intergenic CR45559 - chr3R_46_6890001 chr3R_6890001 D17-c3 2330 chr3R 6918041 6918092 chr3R 6918141 6918195 21 102 4.0 8.0 6.0 3.0 154 chr3R 6918041 intron Antp - chr3R 6918118 intron Antp - chr3R 6918195 intron Antp - chr3R_21_6915001 chr3R_6915001 D17-c3 2331 chr3R 6958905 6958954 chr3R 6959137 6959190 22 233 1.0 5.0 3.0 5.5 285 chr3R 6958905 intron Antp - chr3R 6959048 intron Antp - chr3R 6959190 intron Antp - chr3R_22_6955001 chr3R_6955001 D17-c3 2332 chr3R 6978862 6978913 chr3R 6978972 6979023 9 110 5.0 2.0 3.5 2.0 161 chr3R 6978862 intron Antp - chr3R 6978942 intron Antp - chr3R 6979023 intron Antp - chr3R_9_6975001 chr3R_6975001 D17-c3 2333 chr3R 7034664 7034722 chr3R 7034815 7034873 17 151 4.0 5.5 4.8 2.9 209 chr3R 7034664 intergenic not near genes chr3R 7034768 intergenic not near genes chr3R 7034873 intergenic not near genes chr3R_17_7030001 chr3R_7030001 D17-c3 2334 chr3R 7103262 7103310 chr3R 7103362 7103406 21 97 5.0 8.0 6.5 2.8 144 chr3R 7103262 intron Alh - chr3R 7103334 intron Alh - chr3R 7103406 intron Alh - chr3R_21_7100001 chr3R_7100001 D17-c3 2335 chr3R 7126480 7126533 chr3R 7126600 7126653 15 120 4.0 4.5 4.2 2.9 173 chr3R 7126480 3` UTR,3` UTR CG10098 +,CG10068 - chr3R 7126566 3` UTR CG10068 - chr3R 7126653 3` UTR CG10068 - chr3R_15_7125001 chr3R_7125001 D17-c3 2336 chr3R 7173660 7173707 chr3R 7173765 7173812 7 105 4.5 3.0 3.8 1.5 152 chr3R 7173660 intron sas + chr3R 7173736 intron sas + chr3R 7173812 intron sas + chr3R_7_7170001 chr3R_7170001 D17-c3 2337 chr3R 7210574 7210620 chr3R 7210676 7210731 7 108 0.0 4.5 2.2 2.2 157 chr3R 7210574 intergenic not near genes chr3R 7210652 intergenic not near genes chr3R 7210731 intergenic not near genes chr3R_7_7210001 chr3R_7210001 D17-c3 2338 chr3R 7217431 7217470 chr3R 7217677 7217716 14 246 6.5 6.0 6.2 1.9 285 chr3R 7217431 intergenic CG14605 -,CG14606 - chr3R 7217574 intergenic CG14605 -,CG14606 - chr3R 7217716 3` UTR CG14605 - chr3R_14_7215001 chr3R_7215001 D17-c3 2339 chr3R 7252384 7252428 chr3R 7252496 7252540 9 112 5.0 7.0 6.0 1.3 156 chr3R 7252384 3` UTR Gld - chr3R 7252462 3` UTR Gld - chr3R 7252540 3` UTR Gld - chr3R_9_7250001 chr3R_7250001 D17-c3 2340 chr3R 7319776 7319791 chr3R 7319882 7319897 9 105 21.0 22.0 21.5 0.4 121 chr3R 7319776 intergenic not near genes chr3R 7319836 intergenic not near genes chr3R 7319897 intergenic not near genes chr3R_9_7315001 chr3R_7315001 D17-c3 2341 chr3R 7410565 7410616 chr3R 7410676 7410723 9 109 4.0 5.0 4.5 1.6 158 chr3R 7410565 intergenic not near genes chr3R 7410644 intergenic not near genes chr3R 7410723 intergenic not near genes chr3R_9_7410001 chr3R_7410001 D17-c3 2342 chr3R 7426522 7426561 chr3R 7426651 7426692 29 129 3.5 19.0 11.2 2.4 170 chr3R 7426522 intergenic not near genes chr3R 7426607 intergenic not near genes chr3R 7426692 intergenic not near genes chr3R_29_7425001 chr3R_7425001 D17-c3 2343 chr3R 7444931 7444977 chr3R 7445136 7445182 15 205 2.0 1.0 1.5 6.0 251 chr3R 7444931 intergenic not near genes chr3R 7445056 intergenic not near genes chr3R 7445182 intergenic not near genes chr3R_15_7445001 chr3R_7445001 D17-c3 2344 chr3R 7446898 7446931 chr3R 7447012 7447045 12 114 4.5 4.5 4.5 2.2 147 chr3R 7446898 intergenic not near genes chr3R 7446972 intergenic not near genes chr3R 7447045 intergenic not near genes chr3R_12_7445001 chr3R_7445001 D17-c3 2345 chr3R 7447970 7448010 chr3R 7448073 7448113 14 103 6.5 7.0 6.8 1.8 143 chr3R 7447970 intergenic not near genes chr3R 7448042 intergenic not near genes chr3R 7448113 intergenic not near genes chr3R_14_7445001 chr3R_7445001 D17-c3 2346 chr3R 7580065 7580095 chr3R 7580174 7580201 14 106 24.0 5.5 14.8 0.9 136 chr3R 7580065 intron CG34127 - chr3R 7580133 intron CG34127 - chr3R 7580201 intron CG34127 - chr3R_14_7580001 chr3R_7580001 D17-c3 2347 chr3R 7617968 7618020 chr3R 7618085 7618137 20 117 2.0 6.5 4.2 3.8 169 chr3R 7617968 intron CG34127 - chr3R 7618052 intron CG34127 - chr3R 7618137 intron CG34127 - chr3R_20_7615001 chr3R_7615001 D17-c3 2348 chr3R 7621526 7621563 chr3R 7621642 7621678 8 115 4.0 7.0 5.5 1.2 152 chr3R 7621526 intron CG34127 - chr3R 7621602 intron CG34127 - chr3R 7621678 intron CG34127 - chr3R_8_7620001 chr3R_7620001 D17-c3 2349 chr3R 7726133 7726153 chr3R 7726235 7726255 14 102 17.0 9.0 13.0 1.0 122 chr3R 7726133 intergenic not near genes chr3R 7726194 intergenic not near genes chr3R 7726255 intergenic not near genes chr3R_14_7725001 chr3R_7725001 D17-c3 2350 chr3R 7726156 7726187 chr3R 7726233 7726289 19 101 11.5 9.5 10.5 1.7 133 chr3R 7726156 intergenic not near genes chr3R 7726222 intergenic not near genes chr3R 7726289 intergenic not near genes chr3R_19_7725001 chr3R_7725001 D17-c3 2351 chr3R 7729445 7729494 chr3R 7737408 7737457 Stalker2 18 7963 7.5 8.0 7.8 2.0 8012 chr3R 7729445 intergenic not near genes chr3R 7733451 intergenic not near genes chr3R 7737457 intergenic not near genes chr3R_18_7730001 chr3R_7730001 D17-c3 2352 chr3R 7973295 7973341 chr3R 7974382 7974428 1360 15 1087 5.5 10.5 8.0 1.7 1133 chr3R 7973295 intergenic not near genes chr3R 7973862 intergenic not near genes chr3R 7974428 3` UTR CD98hc - chr3R_15_7970001 chr3R_7970001 D17-c3 2353 chr3R 8070888 8070927 chr3R 8070994 8071033 19 105 11.0 12.5 11.8 1.5 145 chr3R 8070888 intron mAChR-B + chr3R 8070960 intron mAChR-B + chr3R 8071033 intron mAChR-B + chr3R_19_8070001 chr3R_8070001 D17-c3 2354 chr3R 8082560 8082593 chr3R 8082662 8082695 15 101 12.5 16.0 14.2 1.0 135 chr3R 8082560 intron mAChR-B + chr3R 8082628 intron mAChR-B + chr3R 8082695 intron mAChR-B + chr3R_15_8080001 chr3R_8080001 D17-c3 2355 chr3R 8090245 8090303 chr3R 8090447 8090505 24 202 5.5 9.0 7.2 2.9 260 chr3R 8090245 5` UTR CR44330 + chr3R 8090375 intergenic CR44330 + chr3R 8090505 intergenic CR44330 + chr3R_24_8090001 chr3R_8090001 D17-c3 2356 chr3R 8090540 8090568 chr3R 8094042 8094070 297 16 3501 7.0 16.5 11.8 1.2 3530 chr3R 8090540 intergenic CR44330 + chr3R 8092305 intergenic not near genes chr3R 8094070 intergenic CG7900 + chr3R_16_8090001 chr3R_8090001 D17-c3 2357 chr3R 8094387 8094435 chr3R 8099717 8099765 Transpac 16 5330 8.5 4.0 6.2 2.2 5378 chr3R 8094387 intron CG7900 + chr3R 8097076 intron CG7900 + chr3R 8099765 intron CG7900 + chr3R_16_8095001 chr3R_8095001 D17-c3 2358 chr3R 8101740 8101788 chr3R 8104848 8104897 G2 22 3109 7.0 7.0 7.0 2.8 3157 chr3R 8101740 exon CG7900 + chr3R 8103318 intron CG7900 + chr3R 8104897 3` UTR CG7900 + chr3R_22_8100001 chr3R_8100001 D17-c3 2359 chr3R 8107364 8107420 chr3R 8107523 8107579 17 157 2.0 2.0 2.0 5.7 215 chr3R 8107364 intron puc + chr3R 8107472 intron puc + chr3R 8107579 intron puc + chr3R_17_8105001 chr3R_8105001 D17-c3 2360 chr3R 8153141 8153156 chr3R 8153244 8153259 7 102 16.5 10.5 13.5 0.5 118 chr3R 8153141 intron grn - chr3R 8153200 intron grn - chr3R 8153259 exon grn - chr3R_7_8150001 chr3R_8150001 D17-c3 2361 chr3R 8207529 8207576 chr3R 8208399 8208446 F-element 14 866 6.0 5.5 5.8 2.1 917 chr3R 8207529 intergenic not near genes chr3R 8207988 intergenic not near genes chr3R 8208446 intergenic not near genes chr3R_14_8205001 chr3R_8205001 D17-c3 2362 chr3R 8287338 8287381 chr3R 8287469 8287512 18 131 8.5 7.5 8.0 2.0 174 chr3R 8287338 5` UTR CR44318 + chr3R 8287425 intron CR44318 + chr3R 8287512 5` UTR CR44318 + chr3R_18_8285001 chr3R_8285001 D17-c3 2363 chr3R 8287385 8287387 chr3R 22081601 22081601 10 13794215 7.0 2.0 4.5 1.8 13794216 chr3R 8287385 intron CR44318 + chr3R 15184493 intron Gyc88E + chr3R 22081601 intron CG13408 + chr3R_10_15180001 chr3R_15180001 D17-c3 2364 chr3R 8328363 8328410 chr3R 8328465 8328512 16 102 5.0 5.5 5.2 2.6 149 chr3R 8328363 intron Poxm - chr3R 8328438 intron Poxm - chr3R 8328512 intron Poxm - chr3R_16_8325001 chr3R_8325001 D17-c3 2365 chr3R 8339246 8339247 chr3R 21907534 21907536 37 13568289 35.5 30.5 33.0 1.1 13568290 chr3R 8339246 intergenic not near genes chr3R 15123391 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_37_15120001 chr3R_15120001 D17-c3 2366 chr3R 8355902 8355953 chr3R 8358953 8359005 14 3051 36.0 55.5 45.8 0.3 3103 chr3R 8355902 intergenic not near genes chr3R 8357454 5` UTR stck + chr3R 8359005 intron stck + chr3R_14_8355001 chr3R_8355001 D17-c3 2367 chr3R 8355847 8355901 chr3R 8359289 8359343 21 3443 43.5 80.5 62.0 0.3 3496 chr3R 8355847 intergenic not near genes chr3R 8357595 intron stck + chr3R 8359343 exon stck + chr3R_21_8355001 chr3R_8355001 D17-c3 2368 chr3R 8360634 8360652 chr3R 8365145 8365198 18 4513 39.0 73.5 56.2 0.3 4564 chr3R 8360634 exon CG9684 - chr3R 8362916 exon CG7963 + chr3R 8365198 exon CG45263 - chr3R_18_8360001 chr3R_8360001 D17-c3 2369 chr3R 8402983 8402992 chr3R 8412174 8412183 roo 6 9191 21.0 10.0 15.5 0.4 9200 chr3R 8402983 intron CG45263 - chr3R 8407583 intron CG45263 - chr3R 8412183 intron CG45263 - chr3R_6_8405001 chr3R_8405001 D17-c3 2370 chr3R 8402993 8403036 chr3R 8412171 8412222 roo 29 9188 11.5 8.5 10.0 2.6 9229 chr3R 8402993 intron CG45263 - chr3R 8407608 intron CG45263 - chr3R 8412222 intron CG45263 - chr3R_29_8405001 chr3R_8405001 D17-c3 2371 chr3R 8545134 8545192 chr3R 8545244 8545266 34 102 11.5 8.5 10.0 3.1 132 chr3R 8545134 intergenic not near genes chr3R 8545200 intergenic CR45575 + chr3R 8545266 intergenic CR45575 + chr3R_34_8545001 chr3R_8545001 D17-c3 2372 chr3R 8570456 8570507 chr3R 8575117 8575133 HMS-Beagle 15 4657 0.5 4.5 2.5 4.3 4677 chr3R 8570456 intergenic not near genes chr3R 8572794 intergenic not near genes chr3R 8575133 intergenic not near genes chr3R_15_8570001 chr3R_8570001 D17-c3 2373 chr3R 8601750 8601798 chr3R 8610928 8610970 roo 19 9178 5.5 7.0 6.2 2.6 9220 chr3R 8601750 intron 5-HT2B + chr3R 8606360 intron 5-HT2B + chr3R 8610970 intron 5-HT2B + chr3R_19_8605001 chr3R_8605001 D17-c3 2374 chr3R 8621519 8621526 chr3R 8621621 8621628 7 102 14.5 12.0 13.2 0.5 109 chr3R 8621519 intron 5-HT2B + chr3R 8621574 intron 5-HT2B + chr3R 8621628 intron 5-HT2B + chr3R_7_8620001 chr3R_8620001 D17-c3 2375 chr3R 8638034 8638092 chr3R 8638170 8638221 21 136 4.5 5.0 4.8 3.6 187 chr3R 8638034 intergenic not near genes chr3R 8638128 intergenic not near genes chr3R 8638221 intergenic not near genes chr3R_21_8635001 chr3R_8635001 D17-c3 2376 chr3R 8707331 8707380 chr3R 8709797 8709846 jockey 20 2466 14.0 7.5 10.8 1.7 2515 chr3R 8707331 intergenic not near genes chr3R 8708588 intergenic not near genes chr3R 8709846 intergenic not near genes chr3R_20_8705001 chr3R_8705001 D17-c3 2377 chr3R 8898196 8898206 chr3R 8913801 8913811 297 6 15604 19.0 7.5 13.2 0.4 15615 chr3R 8898196 intron pyd - chr3R 8906004 intron pyd - chr3R 8913811 intron pyd - chr3R_6_8905001 chr3R_8905001 D17-c3 2378 chr3R 8917865 8917905 chr3R 8917970 8918010 19 105 4.5 10.0 7.2 2.3 145 chr3R 8917865 intron pyd - chr3R 8917938 intron pyd - chr3R 8918010 intron pyd - chr3R_19_8915001 chr3R_8915001 D17-c3 2379 chr3R 9036690 9036745 chr3R 9036811 9036866 18 121 4.5 4.5 4.5 3.3 176 chr3R 9036690 intron neur - chr3R 9036778 intron neur - chr3R 9036866 intron neur - chr3R_18_9035001 chr3R_9035001 D17-c3 2380 chr3R 9066169 9066220 chr3R 9066270 9066321 32 101 12.5 7.5 10.0 2.9 152 chr3R 9066169 exon Ada + chr3R 9066245 exon Ada + chr3R 9066321 intergenic Ada +,pum - chr3R_32_9065001 chr3R_9065001 D17-c3 2381 chr3R 9101817 9101866 chr3R 9101940 9101989 20 123 5.5 5.5 5.5 3.1 172 chr3R 9101817 intron pum - chr3R 9101903 intron pum - chr3R 9101989 intron pum - chr3R_20_9100001 chr3R_9100001 D17-c3 2382 chr3R 9108845 9108882 chr3R 9108946 9108983 11 101 4.5 7.0 5.8 1.6 138 chr3R 9108845 intron pum - chr3R 9108914 intron pum - chr3R 9108983 intron pum - chr3R_11_9105001 chr3R_9105001 D17-c3 2383 chr3R 9141118 9141171 chr3R 9141227 9141280 30 109 6.5 7.5 7.0 3.8 162 chr3R 9141118 intron pum - chr3R 9141199 intron pum - chr3R 9141280 intron pum - chr3R_30_9140001 chr3R_9140001 D17-c3 2384 chr3R 9143013 9143054 chr3R 9143179 9143220 15 165 4.5 6.0 5.2 2.4 207 chr3R 9143013 intron pum - chr3R 9143116 intron pum - chr3R 9143220 intron pum - chr3R_15_9140001 chr3R_9140001 D17-c3 2385 chr3R 9192035 9192053 chr3R 9192145 9192163 7 110 12.0 10.5 11.2 0.6 128 chr3R 9192035 intron pum - chr3R 9192099 intron pum - chr3R 9192163 intron pum - chr3R_7_9190001 chr3R_9190001 D17-c3 2386 chr3R 9195351 9195379 chr3R 9195476 9195504 10 125 8.5 9.0 8.8 1.0 153 chr3R 9195351 intron pum - chr3R 9195428 intron pum - chr3R 9195504 intron pum - chr3R_10_9195001 chr3R_9195001 D17-c3 2387 chr3R 9211183 9211217 chr3R 9211427 9211461 9 244 4.0 4.0 4.0 1.8 278 chr3R 9211183 intron pum - chr3R 9211322 intron pum - chr3R 9211461 intron pum - chr3R_9_9210001 chr3R_9210001 D17-c3 2388 chr3R 9214777 9214822 chr3R 9214911 9214961 25 134 6.0 6.0 6.0 3.6 184 chr3R 9214777 intron pum - chr3R 9214869 intron pum - chr3R 9214961 intron pum - chr3R_25_9210001 chr3R_9210001 D17-c3 2389 chr3R 9278771 9278806 chr3R 9284056 9284091 Rt1a 19 5285 5.5 12.0 8.8 1.9 5320 chr3R 9278771 intergenic not near genes chr3R 9281431 intergenic not near genes chr3R 9284091 intergenic not near genes chr3R_19_9280001 chr3R_9280001 D17-c3 2390 chr3R 9319553 9319601 chr3R 9320013 9320061 jockey 28 460 7.5 9.0 8.2 3.0 508 chr3R 9319553 intron CG8861 - chr3R 9319807 intron CG8861 - chr3R 9320061 intron CG8861 - chr3R_28_9315001 chr3R_9315001 D17-c3 2391 chr3R 9361810 9361843 chr3R 9362076 9362108 pogo 12 266 5.5 7.0 6.2 1.7 298 chr3R 9361810 3` UTR CG45050 + chr3R 9361959 3` UTR CG45050 + chr3R 9362108 3` UTR CG45050 + chr3R_12_9360001 chr3R_9360001 D17-c3 2392 chr3R 9379155 9379175 chr3R 9379262 9379282 7 107 1.0 8.0 4.5 1.3 127 chr3R 9379155 intron FER - chr3R 9379218 intron FER - chr3R 9379282 intron FER - chr3R_7_9375001 chr3R_9375001 D17-c3 2393 chr3R 9382791 9382848 chr3R 9382941 9382998 18 150 4.5 2.5 3.5 4.0 207 chr3R 9382791 intron FER - chr3R 9382894 intron FER - chr3R 9382998 intron FER - chr3R_18_9380001 chr3R_9380001 D17-c3 2394 chr3R 9434675 9434722 chr3R 9434786 9434834 35 111 6.5 10.0 8.2 3.8 159 chr3R 9434675 intron ps + chr3R 9434754 intron ps + chr3R 9434834 intron ps + chr3R_35_9430001 chr3R_9430001 D17-c3 2395 chr3R 9582277 9582317 chr3R 9582385 9582420 9 107 6.5 4.5 5.5 1.4 143 chr3R 9582277 intron CG8301 + chr3R 9582348 intron CG8301 + chr3R 9582420 intron CG8301 + chr3R_9_9580001 chr3R_9580001 D17-c3 2396 chr3R 9611854 9611888 chr3R 9611961 9611995 14 105 5.5 0.0 2.8 3.7 141 chr3R 9611854 intron CG8312 + chr3R 9611924 intron CG8312 + chr3R 9611995 intron CG8312 + chr3R_14_9610001 chr3R_9610001 D17-c3 2397 chr3R 9620956 9620956 chr3R 21907534 21907536 15 12286580 31.5 30.5 31.0 0.5 12286580 chr3R 9620956 intron CG8312 + chr3R 15764246 intergenic not near genes chr3R 21907536 intergenic CG6678 + chr3R_15_15760001 chr3R_15760001 D17-c3 2398 chr3R 9699957 9700002 chr3R 9700071 9700116 1360 18 113 10.5 12.5 11.5 1.4 159 chr3R 9699957 intron Unc-115a - chr3R 9700036 intron Unc-115a - chr3R 9700116 intron Unc-115a - chr3R_18_9700001 chr3R_9700001 D17-c3 2399 chr3R 9740523 9740541 chr3R 9740634 9740642 5 109 7.5 1.0 4.2 1.0 119 chr3R 9740523 intergenic Pnn + chr3R 9740582 intergenic Pnn + chr3R 9740642 intergenic Pnn + chr3R_5_9740001 chr3R_9740001 D17-c3 2400 chr3R 9829380 9829422 chr3R 9829490 9829532 15 109 6.5 4.5 5.5 2.3 152 chr3R 9829380 intron Teh1 - chr3R 9829456 intron Teh1 - chr3R 9829532 intron Teh1 - chr3R_15_9825001 chr3R_9825001 D17-c3 2401 chr3R 9997398 9997402 chr3R 9997509 9997513 4 111 24.5 10.5 17.5 0.2 115 chr3R 9997398 5` UTR Spn85F + chr3R 9997456 5` UTR Spn85F + chr3R 9997513 5` UTR Spn85F + chr3R_4_9995001 chr3R_9995001 D17-c3 2402 chr3R 9997403 9997404 chr3R 9997508 9997515 4 110 24.0 10.5 17.2 0.2 112 chr3R 9997403 5` UTR Spn85F + chr3R 9997459 5` UTR Spn85F + chr3R 9997515 5` UTR Spn85F + chr3R_4_9995001 chr3R_9995001 D17-c3 2403 chr3R 9997405 9997455 chr3R 9997506 9997566 22 107 10.5 9.5 10.0 2.0 161 chr3R 9997405 5` UTR Spn85F + chr3R 9997486 5` UTR Spn85F + chr3R 9997566 exon Spn85F + chr3R_22_9995001 chr3R_9995001 D17-c3 2404 chr3R 10062222 10062275 chr3R 10062370 10062423 23 148 7.0 6.5 6.8 2.9 201 chr3R 10062222 intergenic CR45205 -,CG33630 + chr3R 10062322 intergenic CG33630 +,CR45205 - chr3R 10062423 intergenic CG33630 +,CR45205 - chr3R_23_10060001 chr3R_10060001 D17-c3 2405 chr3R 10073749 10073801 chr3R 10073883 10073935 21 134 6.5 6.0 6.2 2.9 186 chr3R 10073749 3` UTR nerfin-2 + chr3R 10073842 3` UTR CG5361 - chr3R 10073935 exon CG5361 - chr3R_21_10070001 chr3R_10070001 D17-c3 2406 chr3R 10231761 10231813 chr3R 10237363 10237405 mdg3 17 5599 7.0 9.0 8.0 1.9 5644 chr3R 10231761 intron CG42795 + chr3R 10234583 intron CG42795 + chr3R 10237405 intron CG42795 + chr3R_17_10230001 chr3R_10230001 D17-c3 2407 chr3R 10255361 10255385 chr3R 10260826 10260850 I-element 7 5464 7.5 8.0 7.8 0.8 5489 chr3R 10255361 3` UTR Sirt6 - chr3R 10258106 intron Sirt6 - chr3R 10260850 exon Sirt6 - chr3R_7_10255001 chr3R_10255001 D17-c3 2408 chr3R 10275557 10275580 chr3R 10275654 10275682 9 101 2.5 8.0 5.2 1.5 125 chr3R 10275557 intron CG43143 + chr3R 10275620 intron CG43143 + chr3R 10275682 intron CG43143 + chr3R_9_10275001 chr3R_10275001 D17-c3 2409 chr3R 10306953 10307010 chr3R 10312187 10312244 29 5234 90.0 40.0 65.0 0.4 5291 chr3R 10306953 exon CG43143 + chr3R 10309598 exon CG6293 - chr3R 10312244 3` UTR Bruce - chr3R_29_10305001 chr3R_10305001 D17-c3 2410 chr3R 10403005 10403064 chr3R 10403111 10403170 11 106 5.5 8.5 7.0 1.4 165 chr3R 10403005 3` UTR CG6325 - chr3R 10403088 3` UTR CG6325 - chr3R 10403170 3` UTR CG6325 - chr3R_11_10400001 chr3R_10400001 D17-c3 2411 chr3R 6090420 6090420 chr3R 10451877 10451877 6 4361457 21.5 27.0 24.2 0.2 4361457 chr3R 6090420 intron Gasp - chr3R 8271148 intergenic not near genes chr3R 10451877 intergenic not near genes chr3R_6_8270001 chr3R_8270001 D17-c3 2412 chr3R 10531850 10531884 chr3R 10531956 10531990 17 106 7.0 0.5 3.8 3.5 140 chr3R 10531850 intron hth - chr3R 10531920 intron hth - chr3R 10531990 intron hth - chr3R_17_10530001 chr3R_10530001 D17-c3 2413 chr3R 10535312 10535340 chr3R 10535430 10535457 9 118 5.0 4.5 4.8 1.6 145 chr3R 10535312 intron hth - chr3R 10535384 intron hth - chr3R 10535457 intron hth - chr3R_9_10535001 chr3R_10535001 D17-c3 2414 chr3R 10593432 10593462 chr3R 10593533 10593571 7 107 4.0 6.0 5.0 1.2 139 chr3R 10593432 intron hth - chr3R 10593502 intron hth - chr3R 10593571 exon hth - chr3R_7_10590001 chr3R_10590001 D17-c3 2415 chr3R 10686315 10686338 chr3R 10686421 10686443 18 106 21.5 11.0 16.2 1.0 128 chr3R 10686315 intergenic not near genes chr3R 10686379 intergenic not near genes chr3R 10686443 intergenic Skeletor + chr3R_18_10685001 chr3R_10685001 D17-c3 2416 chr3R 10724928 10724981 chr3R 10725031 10725084 18 103 6.0 4.5 5.2 2.9 156 chr3R 10724928 intergenic not near genes chr3R 10725006 intergenic not near genes chr3R 10725084 intergenic not near genes chr3R_18_10725001 chr3R_10725001 D17-c3 2417 chr3R 10727619 10727676 chr3R 10727724 10727776 36 104 11.0 11.5 11.2 3.0 157 chr3R 10727619 intergenic not near genes chr3R 10727698 intergenic not near genes chr3R 10727776 intergenic not near genes chr3R_36_10725001 chr3R_10725001 D17-c3 2418 chr3R 10730973 10731015 chr3R 10731164 10731206 9 191 6.0 4.0 5.0 1.5 233 chr3R 10730973 intergenic not near genes chr3R 10731090 intergenic not near genes chr3R 10731206 intergenic not near genes chr3R_9_10730001 chr3R_10730001 D17-c3 2419 chr3R 10799754 10799765 chr3R 10799997 10800008 4 243 3.0 6.0 4.5 0.7 254 chr3R 10799754 exon CG14692 - chr3R 10799881 exon CG14692 - chr3R 10800008 intron CG14692 - chr3R_4_10795001 chr3R_10795001 D17-c3 2420 chr3R 10804150 10804195 chr3R 10811707 10811752 17.6 16 7557 5.5 6.5 6.0 2.3 7602 chr3R 10804150 intergenic CG14692 - chr3R 10807951 intergenic not near genes chr3R 10811752 3` UTR CG14693 - chr3R_16_10805001 chr3R_10805001 D17-c3 2421 chr3R 10830903 10830933 chr3R 10830998 10831055 8 113 12.0 1.0 6.5 1.1 152 chr3R 10830903 intron Cad86C + chr3R 10830979 intron Cad86C + chr3R 10831055 intron Cad86C + chr3R_8_10830001 chr3R_10830001 D17-c3 2422 chr3R 10954109 10954163 chr3R 10954224 10954278 26 113 13.0 5.5 9.2 2.5 169 chr3R 10954109 intergenic not near genes chr3R 10954194 intergenic not near genes chr3R 10954278 intergenic not near genes chr3R_26_10950001 chr3R_10950001 D17-c3 2423 chr3R 10957863 10957885 chr3R 10963264 10963287 Rt1c 10 5401 8.5 9.5 9.0 1.0 5424 chr3R 10957863 intergenic not near genes chr3R 10960575 intergenic not near genes chr3R 10963287 intergenic not near genes chr3R_10_10960001 chr3R_10960001 D17-c3 2424 chr3R 10963540 10963585 chr3R 10963659 10963704 10 118 6.0 5.0 5.5 1.5 164 chr3R 10963540 intergenic not near genes chr3R 10963622 intergenic not near genes chr3R 10963704 intergenic not near genes chr3R_10_10960001 chr3R_10960001 D17-c3 2425 chr3R 11056880 11056898 chr3R 11056983 11057001 5 103 6.5 1.0 3.8 1.0 121 chr3R 11056880 intergenic not near genes chr3R 11056940 intergenic not near genes chr3R 11057001 intergenic not near genes chr3R_5_11055001 chr3R_11055001 D17-c3 2426 chr3R 11099632 11099687 chr3R 11099789 11099843 23 157 6.5 2.5 4.5 4.2 211 chr3R 11099632 intergenic not near genes chr3R 11099738 intergenic not near genes chr3R 11099843 intergenic not near genes chr3R_23_11095001 chr3R_11095001 D17-c3 2427 chr3R 11102300 11102340 chr3R 11102404 11102446 16 105 10.5 7.0 8.8 1.6 146 chr3R 11102300 intergenic not near genes chr3R 11102373 intergenic not near genes chr3R 11102446 intergenic not near genes chr3R_16_11100001 chr3R_11100001 D17-c3 2428 chr3R 11103146 11103156 chr3R 11103253 11103263 4 107 0.0 0.0 0.0 4.0 117 chr3R 11103146 intergenic not near genes chr3R 11103204 intergenic not near genes chr3R 11103263 intergenic not near genes chr3R_4_11100001 chr3R_11100001 D17-c3 2429 chr3R 11104245 11104278 chr3R 11104349 11104367 10 102 5.5 0.0 2.8 2.6 122 chr3R 11104245 intergenic not near genes chr3R 11104306 intergenic not near genes chr3R 11104367 intergenic not near genes chr3R_10_11100001 chr3R_11100001 D17-c3 2430 chr3R 11151676 11151705 chr3R 11156544 11156573 8 4868 36.5 19.5 28.0 0.3 4897 chr3R 11151676 3` UTR Ugt86Di - chr3R 11154124 intergenic Ugt86Di - chr3R 11156573 intergenic Ugt86Dc + chr3R_8_11150001 chr3R_11150001 D17-c3 2431 chr3R 11174567 11174615 chr3R 11175306 11175354 11 739 42.0 47.0 44.5 0.2 787 chr3R 11174567 exon Ugt86Dj - chr3R 11174960 intron Ugt86Dj - chr3R 11175354 exon Ugt86Dj - chr3R_11_11170001 chr3R_11170001 D17-c3 2432 chr3R 11197957 11198001 chr3R 11198081 11198125 18 124 7.0 5.0 6.0 2.6 168 chr3R 11197957 intron cu + chr3R 11198041 intron cu + chr3R 11198125 intron cu + chr3R_18_11195001 chr3R_11195001 D17-c3 2433 chr3R 11259664 11259714 chr3R 11259781 11259821 20 116 6.0 2.5 4.2 3.8 157 chr3R 11259664 intergenic not near genes chr3R 11259742 intergenic not near genes chr3R 11259821 intergenic not near genes chr3R_20_11255001 chr3R_11255001 D17-c3 2434 chr3R 11263476 11263525 chr3R 11263584 11263633 12 108 3.5 5.5 4.5 2.2 157 chr3R 11263476 intergenic not near genes chr3R 11263554 intergenic not near genes chr3R 11263633 intergenic not near genes chr3R_12_11260001 chr3R_11260001 D17-c3 2435 chr3R 11265907 11265923 chr3R 11266016 11266032 10 108 14.0 23.0 18.5 0.5 125 chr3R 11265907 intergenic not near genes chr3R 11265970 intergenic not near genes chr3R 11266032 intergenic not near genes chr3R_10_11265001 chr3R_11265001 D17-c3 2436 chr3R 11379214 11379252 chr3R 11388394 11388432 roo 13 9179 8.0 8.5 8.2 1.4 9218 chr3R 11379214 intron pros + chr3R 11383823 intron pros + chr3R 11388432 intron pros + chr3R_13_11380001 chr3R_11380001 D17-c3 2437 chr3R 11442337 11442364 chr3R 11442534 11442574 11 205 6.0 9.5 7.8 1.2 237 chr3R 11442337 intron,intron sals -,CG17230 + chr3R 11442456 intron,intron sals -,CG17230 + chr3R 11442574 intron,intron sals -,CG17230 + chr3R_11_11440001 chr3R_11440001 D17-c3 2438 chr3R 11476351 11476396 chr3R 11476464 11476504 28 109 11.0 9.0 10.0 2.5 153 chr3R 11476351 intergenic not near genes chr3R 11476428 intergenic not near genes chr3R 11476504 intergenic not near genes chr3R_28_11475001 chr3R_11475001 D17-c3 2439 chr3R 11545856 11545907 chr3R 11545998 11546049 13 142 4.0 2.5 3.2 3.1 193 chr3R 11545856 intergenic not near genes chr3R 11545952 intergenic not near genes chr3R 11546049 intergenic not near genes chr3R_13_11545001 chr3R_11545001 D17-c3 2440 chr3R 11694713 11694739 chr3R 11694821 11694857 9 117 2.5 0.5 1.5 3.6 144 chr3R 11694713 intergenic Fer3 - chr3R 11694785 intergenic Fer3 - chr3R 11694857 intergenic not near genes chr3R_9_11690001 chr3R_11690001 D17-c3 2441 chr3R 11695724 11695767 chr3R 11695830 11695873 15 106 5.5 7.0 6.2 2.1 149 chr3R 11695724 intergenic not near genes chr3R 11695798 intergenic not near genes chr3R 11695873 intergenic not near genes chr3R_15_11695001 chr3R_11695001 D17-c3 2442 chr3R 11757711 11757757 chr3R 11757837 11757883 12 126 12.0 3.0 7.5 1.4 172 chr3R 11757711 intron Lk6 - chr3R 11757797 intron Lk6 - chr3R 11757883 intron Lk6 - chr3R_12_11755001 chr3R_11755001 D17-c3 2443 chr3R 11841039 11841089 chr3R 11846255 11846305 BS 22 5216 11.0 9.5 10.2 2.0 5266 chr3R 11841039 intron CG6959 - chr3R 11843672 intron CG6959 - chr3R 11846305 intron CG6959 - chr3R_22_11840001 chr3R_11840001 D17-c3 2444 chr3R 11879342 11879402 chr3R 11885204 11885249 37 5854 103.0 59.0 81.0 0.5 5907 chr3R 11879342 exon sad + chr3R 11882296 exon CG6962 - chr3R 11885249 intron,exon CG31368 +,mthl5 - chr3R_37_11880001 chr3R_11880001 D17-c3 2445 chr3R 11920948 11921003 chr3R 11921070 11921125 26 118 8.0 7.0 7.5 3.1 177 chr3R 11920948 intron Cad87A - chr3R 11921036 intron Cad87A - chr3R 11921125 intron Cad87A - chr3R_26_11920001 chr3R_11920001 D17-c3 2446 chr3R 12022859 12022911 chr3R 12025061 12025113 pogo 25 2202 3.0 5.5 4.2 4.8 2254 chr3R 12022859 intergenic not near genes chr3R 12023986 intergenic not near genes chr3R 12025113 intergenic not near genes chr3R_25_12020001 chr3R_12020001 D17-c3 2447 chr3R 12064257 12064300 chr3R 12064364 12064407 11 107 3.0 5.0 4.0 2.2 150 chr3R 12064257 intergenic not near genes chr3R 12064332 intergenic not near genes chr3R 12064407 intergenic not near genes chr3R_11_12060001 chr3R_12060001 D17-c3 2448 chr3R 12102846 12102885 chr3R 12102972 12103011 26 126 10.5 20.0 15.2 1.6 165 chr3R 12102846 intron dpr17 + chr3R 12102928 intron dpr17 + chr3R 12103011 intron dpr17 + chr3R_26_12100001 chr3R_12100001 D17-c3 2449 chr3R 12149381 12149433 chr3R 12149491 12149543 22 108 10.0 10.5 10.2 2.0 162 chr3R 12149381 intron dpr15 - chr3R 12149462 intron dpr15 - chr3R 12149543 intron dpr15 - chr3R_22_12145001 chr3R_12145001 D17-c3 2450 chr3R 12170708 12170764 chr3R 12170840 12170896 33 132 7.5 8.0 7.8 3.7 188 chr3R 12170708 intergenic not near genes chr3R 12170802 intergenic not near genes chr3R 12170896 intergenic not near genes chr3R_33_12170001 chr3R_12170001 D17-c3 2451 chr3R 12175014 12175070 chr3R 12175242 12175298 18 228 6.0 6.5 6.2 2.5 284 chr3R 12175014 intergenic not near genes chr3R 12175156 intergenic not near genes chr3R 12175298 intergenic not near genes chr3R_18_12175001 chr3R_12175001 D17-c3 2452 chr3R 12202266 12202315 chr3R 12202400 12202449 19 130 5.5 6.5 6.0 2.7 183 chr3R 12202266 intergenic not near genes chr3R 12202358 intergenic not near genes chr3R 12202449 intergenic not near genes chr3R_19_12200001 chr3R_12200001 D17-c3 2453 chr3R 12214343 12214354 chr3R 12214459 12214470 8 116 11.5 20.0 15.8 0.5 127 chr3R 12214343 3` UTR CG4848 - chr3R 12214406 3` UTR CG4848 - chr3R 12214470 3` UTR CG4848 - chr3R_8_12210001 chr3R_12210001 D17-c3 2454 chr3R 12214358 12214370 chr3R 12214445 12214486 9 113 7.0 12.0 9.5 0.9 128 chr3R 12214358 3` UTR CG4848 - chr3R 12214422 3` UTR CG4848 - chr3R 12214486 3` UTR CG4848 - chr3R_9_12210001 chr3R_12210001 D17-c3 2455 chr3R 12247126 12247168 chr3R 12247226 12247278 14 109 5.5 4.5 5.0 2.3 152 chr3R 12247126 intergenic not near genes chr3R 12247202 intergenic not near genes chr3R 12247278 intergenic not near genes chr3R_14_12245001 chr3R_12245001 D17-c3 2456 chr3R 12267848 12267889 chr3R 12267953 12267993 11 105 2.5 4.5 3.5 2.4 145 chr3R 12267848 intron svp + chr3R 12267920 intron svp + chr3R 12267993 intron svp + chr3R_11_12265001 chr3R_12265001 D17-c3 2457 chr3R 12290835 12290871 chr3R 12290951 12290987 26 115 21.5 17.0 19.2 1.3 152 chr3R 12290835 intron svp + chr3R 12290911 intron svp + chr3R 12290987 intron svp + chr3R_26_12290001 chr3R_12290001 D17-c3 2458 chr3R 12297627 12297644 chr3R 12297729 12297746 9 102 19.5 30.5 25.0 0.3 119 chr3R 12297627 intron svp + chr3R 12297686 intron svp + chr3R 12297746 intron svp + chr3R_9_12295001 chr3R_12295001 D17-c3 2459 chr3R 12314199 12314256 chr3R 12314338 12314395 29 139 6.0 6.5 6.2 4.0 196 chr3R 12314199 intergenic not near genes chr3R 12314297 intergenic not near genes chr3R 12314395 intergenic not near genes chr3R_29_12310001 chr3R_12310001 D17-c3 2460 chr3R 12344104 12344157 chr3R 12344206 12344259 19 99 4.5 2.5 3.5 4.2 155 chr3R 12344104 intergenic not near genes chr3R 12344182 intergenic not near genes chr3R 12344259 intergenic not near genes chr3R_19_12340001 chr3R_12340001 D17-c3 2461 chr3R 12392866 12392901 chr3R 12392991 12393026 23 122 9.0 16.5 12.8 1.7 160 chr3R 12392866 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R 12392946 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R 12393026 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R_23_12390001 chr3R_12390001 D17-c3 2462 chr3R 12436429 12436483 chr3R 12436541 12436595 29 106 7.5 8.5 8.0 3.2 166 chr3R 12436429 exon Desat2 + chr3R 12436512 exon Desat2 + chr3R 12436595 exon Desat2 + chr3R_29_12435001 chr3R_12435001 D17-c3 2463 chr3R 12542378 12542431 chr3R 12542486 12542538 14 105 8.5 7.5 8.0 1.6 160 chr3R 12542378 intron Octbeta3R - chr3R 12542458 intron Octbeta3R - chr3R 12542538 intron Octbeta3R - chr3R_14_12540001 chr3R_12540001 D17-c3 2464 chr3R 12599349 12599405 chr3R 12599457 12599513 26 107 3.5 7.5 5.5 4.0 164 chr3R 12599349 intergenic not near genes chr3R 12599431 intergenic not near genes chr3R 12599513 intergenic not near genes chr3R_26_12595001 chr3R_12595001 D17-c3 2465 chr3R 12602370 12602415 chr3R 12602473 12602518 20 102 8.0 6.5 7.2 2.4 148 chr3R 12602370 intergenic not near genes chr3R 12602444 intergenic not near genes chr3R 12602518 intergenic not near genes chr3R_20_12600001 chr3R_12600001 D17-c3 2466 chr3R 12666744 12666796 chr3R 12666896 12666948 27 151 11.0 8.0 9.5 2.6 204 chr3R 12666744 intron CG14395 + chr3R 12666846 intron CG14395 + chr3R 12666948 intron CG14395 + chr3R_27_12665001 chr3R_12665001 D17-c3 2467 chr3R 12733450 12733507 chr3R 12733552 12733609 37 99 12.5 12.0 12.2 2.8 159 chr3R 12733450 intergenic not near genes chr3R 12733530 intergenic not near genes chr3R 12733609 intergenic not near genes chr3R_37_12730001 chr3R_12730001 D17-c3 2468 chr3R 12787927 12787955 chr3R 12788035 12788063 14 108 8.0 7.0 7.5 1.6 136 chr3R 12787927 intergenic not near genes chr3R 12787995 intergenic not near genes chr3R 12788063 intergenic not near genes chr3R_14_12785001 chr3R_12785001 D17-c3 2469 chr3R 12810029 12810080 chr3R 12810131 12810182 25 97 15.0 20.0 17.5 1.4 153 chr3R 12810029 intergenic not near genes chr3R 12810106 intergenic not near genes chr3R 12810182 intergenic not near genes chr3R_25_12810001 chr3R_12810001 D17-c3 2470 chr3R 12864573 12864593 chr3R 12865083 12865103 roo 4 510 0.0 4.5 2.2 1.2 530 chr3R 12864573 intergenic not near genes chr3R 12864838 intergenic not near genes chr3R 12865103 intergenic not near genes chr3R_4_12860001 chr3R_12860001 D17-c3 2471 chr3R 12866465 12866517 chr3R 12866640 12866693 26 175 7.5 4.5 6.0 3.7 228 chr3R 12866465 intergenic not near genes chr3R 12866579 intergenic not near genes chr3R 12866693 intergenic not near genes chr3R_26_12865001 chr3R_12865001 D17-c3 2472 chr3R 12886896 12886949 chr3R 12887006 12887059 25 109 11.0 7.0 9.0 2.5 163 chr3R 12886896 intergenic not near genes chr3R 12886978 intergenic not near genes chr3R 12887059 intergenic not near genes chr3R_25_12885001 chr3R_12885001 D17-c3 2473 chr3R 12920134 12920154 chr3R 12925362 12925375 copia 7 5227 10.0 5.5 7.8 0.8 5241 chr3R 12920134 intron beat-Vb + chr3R 12922754 intron beat-Vb + chr3R 12925375 intron beat-Vb + chr3R_7_12920001 chr3R_12920001 D17-c3 2474 chr3R 12920157 12920178 chr3R 12925359 12925406 copia 14 5226 5.5 5.0 5.2 2.3 5249 chr3R 12920157 intron beat-Vb + chr3R 12922782 intron beat-Vb + chr3R 12925406 intron beat-Vb + chr3R_14_12920001 chr3R_12920001 D17-c3 2475 chr3R 12926707 12926751 chr3R 12926843 12926887 15 136 4.0 5.0 4.5 2.7 180 chr3R 12926707 intron beat-Vb + chr3R 12926797 intron beat-Vb + chr3R 12926887 intron beat-Vb + chr3R_15_12925001 chr3R_12925001 D17-c3 2476 chr3R 13022050 13022052 chr3R 13022157 13022164 5 111 18.5 13.0 15.8 0.3 114 chr3R 13022050 intron CtBP + chr3R 13022107 intron CtBP + chr3R 13022164 intron CtBP + chr3R_5_13020001 chr3R_13020001 D17-c3 2477 chr3R 13026998 13027037 chr3R 13027104 13027143 12 105 5.5 9.5 7.5 1.4 145 chr3R 13026998 3` UTR CG12360 - chr3R 13027070 3` UTR CG12360 - chr3R 13027143 3` UTR CG12360 - chr3R_12_13025001 chr3R_13025001 D17-c3 2478 chr3R 13059945 13059976 chr3R 13060165 13060196 10 220 5.0 3.5 4.2 1.9 251 chr3R 13059945 intron sim + chr3R 13060070 intron sim + chr3R 13060196 intron sim + chr3R_10_13060001 chr3R_13060001 D17-c3 2479 chr3R 13066980 13067123 chr3R 13067092 13067224 10 109 3.5 1.5 2.5 2.9 244 chr3R 13066980 intron sim + chr3R 13067102 intron sim + chr3R 13067224 intron sim + chr3R_10_13065001 chr3R_13065001 D17-c3 2480 chr3R 13075340 13075371 chr3R 13075446 13075447 8 102 8.0 4.5 6.2 1.1 107 chr3R 13075340 intron sim + chr3R 13075394 intron sim + chr3R 13075447 intron sim + chr3R_8_13075001 chr3R_13075001 D17-c3 2481 chr3R 13103994 13104004 chr3R 13104096 13104106 6 102 7.0 0.0 3.5 1.3 112 chr3R 13103994 intron timeout + chr3R 13104050 intron timeout + chr3R 13104106 intron timeout + chr3R_6_13100001 chr3R_13100001 D17-c3 2482 chr3R 13104419 13104420 chr3R 21907534 21907536 5 8803115 47.0 30.5 38.8 0.1 8803117 chr3R 13104419 intron timeout + chr3R 17505978 intergenic Dscam3 - chr3R 21907536 intergenic CG6678 + chr3R_5_17505001 chr3R_17505001 D17-c3 2483 chr3R 13120747 13120800 chr3R 13120849 13120902 22 102 4.0 9.0 6.5 2.9 155 chr3R 13120747 intron timeout + chr3R 13120824 intron timeout + chr3R 13120902 intron timeout + chr3R_22_13120001 chr3R_13120001 D17-c3 2484 chr3R 13135802 13135858 chr3R 13138002 13138058 pogo 18 2200 7.0 3.0 5.0 3.0 2256 chr3R 13135802 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13136930 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138058 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_18_13135001 chr3R_13135001 D17-c3 2485 chr3R 13143016 13143063 chr3R 13148617 13148664 mdg3 25 5595 7.0 9.0 8.0 2.8 5648 chr3R 13143016 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145840 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148664 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_25_13145001 chr3R_13145001 D17-c3 2486 chr3R 13195928 13195981 chr3R 13196048 13196101 27 119 11.0 4.5 7.8 3.1 173 chr3R 13195928 intergenic not near genes chr3R 13196014 intergenic not near genes chr3R 13196101 intergenic not near genes chr3R_27_13195001 chr3R_13195001 D17-c3 2487 chr3R 13198314 13198359 chr3R 13198638 13198683 13 324 33.5 14.5 24.0 0.5 369 chr3R 13198314 intergenic not near genes chr3R 13198498 intergenic not near genes chr3R 13198683 intergenic not near genes chr3R_13_13195001 chr3R_13195001 D17-c3 2488 chr3R 13197945 13198002 chr3R 13198547 13198604 13 602 44.0 18.0 31.0 0.4 659 chr3R 13197945 intergenic not near genes chr3R 13198274 intergenic not near genes chr3R 13198604 intergenic not near genes chr3R_13_13195001 chr3R_13195001 D17-c3 2489 chr3R 13205403 13205435 chr3R 13205509 13205541 8 106 17.5 15.5 16.5 0.5 138 chr3R 13205403 intergenic not near genes chr3R 13205472 intergenic not near genes chr3R 13205541 intergenic not near genes chr3R_8_13205001 chr3R_13205001 D17-c3 2490 chr3R 13248632 13248681 chr3R 13248756 13248790 11 123 7.5 8.5 8.0 1.2 158 chr3R 13248632 intron Ace - chr3R 13248711 intron Ace - chr3R 13248790 intron Ace - chr3R_11_13245001 chr3R_13245001 D17-c3 2491 chr3R 13302889 13302925 chr3R 13303045 13303081 10 155 32.5 36.5 34.5 0.3 192 chr3R 13302889 exon CG32473 + chr3R 13302985 exon CG32473 + chr3R 13303081 exon CG32473 + chr3R_10_13300001 chr3R_13300001 D17-c3 2492 chr3R 13314081 13314125 chr3R 13318895 13318938 Doc 5 4813 4.0 6.0 5.0 0.8 4857 chr3R 13314081 intergenic not near genes chr3R 13316510 intergenic not near genes chr3R 13318938 intergenic CG45080 - chr3R_5_13315001 chr3R_13315001 D17-c3 2493 chr3R 13323646 13323691 chr3R 13323868 13323918 6 224 18.0 25.5 21.8 0.3 272 chr3R 13323646 intergenic not near genes chr3R 13323782 intergenic not near genes chr3R 13323918 intergenic not near genes chr3R_6_13320001 chr3R_13320001 D17-c3 2494 chr3R 13336522 13336579 chr3R 13337725 13337782 11 1203 68.5 43.0 55.8 0.2 1260 chr3R 13336522 intergenic not near genes chr3R 13337152 intergenic not near genes chr3R 13337782 intergenic not near genes chr3R_11_13335001 chr3R_13335001 D17-c3 2495 chr3R 13363448 13363490 chr3R 13363569 13363610 4 121 6.5 8.0 7.2 0.5 162 chr3R 13363448 intron poly - chr3R 13363529 intron poly - chr3R 13363610 intron poly - chr3R_4_13360001 chr3R_13360001 D17-c3 2496 chr3R 13435371 13435406 chr3R 13435571 13435606 5 200 8.5 14.0 11.2 0.4 235 chr3R 13435371 intergenic yrt - chr3R 13435488 intergenic not near genes chr3R 13435606 intergenic not near genes chr3R_5_13435001 chr3R_13435001 D17-c3 2497 chr3R 13439566 13439601 chr3R 13439673 13439708 6 107 10.5 12.0 11.2 0.5 142 chr3R 13439566 intergenic CR42756 - chr3R 13439637 intergenic CR42756 - chr3R 13439708 intergenic CR42756 - chr3R_6_13435001 chr3R_13435001 D17-c3 2498 chr3R 13456353 13456395 chr3R 13456463 13456509 11 113 15.0 11.0 13.0 0.8 156 chr3R 13456353 intron,intron CG14372 +,CR17025 - chr3R 13456431 intron,intron CG14372 +,CR17025 - chr3R 13456509 intron,intron CG14372 +,CR17025 - chr3R_11_13455001 chr3R_13455001 D17-c3 2499 chr3R 13505837 13505865 chr3R 13505937 13505966 8 101 8.5 8.5 8.5 0.8 129 chr3R 13505837 intergenic not near genes chr3R 13505902 intergenic not near genes chr3R 13505966 intergenic not near genes chr3R_8_13505001 chr3R_13505001 D17-c3 2500 chr3R 13554124 13554172 chr3R 13554228 13554236 14 98 19.0 20.5 19.8 0.7 112 chr3R 13554124 intergenic not near genes chr3R 13554180 intergenic not near genes chr3R 13554236 intergenic not near genes chr3R_14_13550001 chr3R_13550001 D17-c3 2501 chr3R 13558021 13558044 chr3R 13558133 13558156 8 112 19.5 13.0 16.2 0.5 135 chr3R 13558021 intergenic not near genes chr3R 13558088 intergenic not near genes chr3R 13558156 intergenic not near genes chr3R_8_13555001 chr3R_13555001 D17-c3 2502 chr3R 13574575 13574599 chr3R 13574677 13574701 6 101 24.0 39.0 31.5 0.2 126 chr3R 13574575 intergenic CR43848 + chr3R 13574638 intergenic CR43848 + chr3R 13574701 intergenic CR43848 + chr3R_6_13570001 chr3R_13570001 D17-c3 2503 chr3R 13580819 13580829 chr3R 13580921 13580931 5 102 18.5 22.5 20.5 0.2 112 chr3R 13580819 intergenic not near genes chr3R 13580875 intergenic not near genes chr3R 13580931 intergenic not near genes chr3R_5_13580001 chr3R_13580001 D17-c3 2504 chr3R 13584671 13584708 chr3R 13584827 13584864 5 154 15.0 8.5 11.8 0.4 193 chr3R 13584671 intergenic not near genes chr3R 13584768 intergenic not near genes chr3R 13584864 intergenic not near genes chr3R_5_13580001 chr3R_13580001 D17-c3 2505 chr3R 13599052 13599086 chr3R 13599157 13599191 5 105 9.0 7.5 8.2 0.5 139 chr3R 13599052 intergenic not near genes chr3R 13599122 intergenic not near genes chr3R 13599191 intergenic not near genes chr3R_5_13595001 chr3R_13595001 D17-c3 2506 chr3R 13603032 13603074 chr3R 13603148 13603190 17 116 4.0 5.0 4.5 3.1 158 chr3R 13603032 intergenic not near genes chr3R 13603111 intergenic not near genes chr3R 13603190 intergenic not near genes chr3R_17_13600001 chr3R_13600001 D17-c3 2507 chr3R 13672918 13672969 chr3R 13673021 13673072 11 103 10.5 11.5 11.0 0.9 154 chr3R 13672918 intron Task6 - chr3R 13672995 intron Task6 - chr3R 13673072 intron Task6 - chr3R_11_13670001 chr3R_13670001 D17-c3 2508 chr3R 13693028 13693028 chr3R 21907534 21907536 21 8214507 29.0 30.5 29.8 0.7 8214508 chr3R 13693028 3` UTR flfl + chr3R 17800282 exon CG17803 - chr3R 21907536 intergenic CG6678 + chr3R_21_17800001 chr3R_17800001 D17-c3 2509 chr3R 13714507 13714550 chr3R 13714671 13714714 7 164 5.0 11.0 8.0 0.8 207 chr3R 13714507 intergenic CR34044 - chr3R 13714610 intergenic CR34044 - chr3R 13714714 intergenic CG34383 + chr3R_7_13710001 chr3R_13710001 D17-c3 2510 chr3R 13728512 13728550 chr3R 13728614 13728652 5 102 6.0 0.0 3.0 1.2 140 chr3R 13728512 intron CG34383 + chr3R 13728582 intron CG34383 + chr3R 13728652 intron CG34383 + chr3R_5_13725001 chr3R_13725001 D17-c3 2511 chr3R 13782033 13782082 chr3R 13782139 13782186 9 106 9.0 9.5 9.2 0.9 153 chr3R 13782033 exon CG9286 + chr3R 13782110 intergenic CG9286 +,Dip-B + chr3R 13782186 intergenic Dip-B +,CG9286 + chr3R_9_13780001 chr3R_13780001 D17-c3 2512 chr3R 13828821 13828851 chr3R 13828932 13828962 9 111 18.5 16.0 17.2 0.5 141 chr3R 13828821 intergenic CR43300 + chr3R 13828892 intergenic CR43300 + chr3R 13828962 intergenic not near genes chr3R_9_13825001 chr3R_13825001 D17-c3 2513 chr3R 13863657 13863713 chr3R 13863770 13863826 21 113 3.0 3.0 3.0 5.2 169 chr3R 13863657 intergenic not near genes chr3R 13863742 intergenic not near genes chr3R 13863826 intergenic not near genes chr3R_21_13860001 chr3R_13860001 D17-c3 2514 chr3R 13909894 13909907 chr3R 13909998 13910011 7 103 3.0 11.5 7.2 0.9 117 chr3R 13909894 intergenic not near genes chr3R 13909952 intergenic not near genes chr3R 13910011 intergenic not near genes chr3R_7_13905001 chr3R_13905001 D17-c3 2515 chr3R 13975352 13975401 chr3R 13975457 13975506 16 105 6.0 7.0 6.5 2.1 154 chr3R 13975352 intron rdx - chr3R 13975429 intron rdx - chr3R 13975506 intron rdx - chr3R_16_13975001 chr3R_13975001 D17-c3 2516 chr3R 14021624 14021680 chr3R 14023466 14023522 S-element 25 1842 7.5 5.5 6.5 3.3 1898 chr3R 14021624 intron rdx - chr3R 14022573 intron rdx - chr3R 14023522 intron rdx - chr3R_25_14020001 chr3R_14020001 D17-c3 2517 chr3R 14037563 14037587 chr3R 14037667 14037691 12 104 18.0 10.5 14.2 0.8 128 chr3R 14037563 intergenic not near genes chr3R 14037627 intergenic not near genes chr3R 14037691 intergenic not near genes chr3R_12_14035001 chr3R_14035001 D17-c3 2518 chr3R 14058100 14058141 chr3R 14058245 14058286 8 145 7.5 5.5 6.5 1.1 186 chr3R 14058100 5` UTR foxo + chr3R 14058193 intron foxo + chr3R 14058286 intron foxo + chr3R_8_14055001 chr3R_14055001 D17-c3 2519 chr3R 14067120 14067155 chr3R 14067224 14067259 21 104 1.5 3.0 2.2 6.6 139 chr3R 14067120 exon foxo + chr3R 14067190 intron foxo + chr3R 14067259 intron foxo + chr3R_21_14065001 chr3R_14065001 D17-c3 2520 chr3R 14070107 14070143 chr3R 14070213 14070249 22 106 13.5 7.5 10.5 1.9 142 chr3R 14070107 intron foxo + chr3R 14070178 intron foxo + chr3R 14070249 intron foxo + chr3R_22_14070001 chr3R_14070001 D17-c3 2521 chr3R 14180789 14180835 chr3R 14185579 14185625 F-element 6 4790 8.5 5.0 6.8 0.8 4836 chr3R 14180789 intron Dop1R1 - chr3R 14183207 intron Dop1R1 - chr3R 14185625 intron Dop1R1 - chr3R_6_14180001 chr3R_14180001 D17-c3 2522 chr3R 14194428 14194454 chr3R 14203602 14203628 roo 8 9174 5.0 7.5 6.2 1.1 9200 chr3R 14194428 intron Dop1R1 - chr3R 14199028 intron Dop1R1 - chr3R 14203628 intron Dop1R1 - chr3R_8_14195001 chr3R_14195001 D17-c3 2523 chr3R 14246368 14246399 chr3R 14247889 14247920 jockey 16 1517 13.5 6.5 10.0 1.5 1552 chr3R 14246368 intergenic not near genes chr3R 14247144 intergenic not near genes chr3R 14247920 intergenic not near genes chr3R_16_14245001 chr3R_14245001 D17-c3 2524 chr3R 14246401 14246414 chr3R 14247885 14247935 jockey 10 1507 9.0 5.5 7.2 1.2 1534 chr3R 14246401 intergenic not near genes chr3R 14247168 intergenic not near genes chr3R 14247935 intergenic not near genes chr3R_10_14245001 chr3R_14245001 D17-c3 2525 chr3R 14248708 14248736 chr3R 14248811 14248839 8 103 2.0 2.0 2.0 2.7 131 chr3R 14248708 intergenic not near genes chr3R 14248774 intergenic not near genes chr3R 14248839 intergenic not near genes chr3R_8_14245001 chr3R_14245001 D17-c3 2526 chr3R 14256754 14256769 chr3R 14256865 14256880 4 111 9.5 7.0 8.2 0.4 126 chr3R 14256754 intron,3` UTR Aats-met -,CG43179 + chr3R 14256817 intron,3` UTR Aats-met -,CG43179 + chr3R 14256880 intron,3` UTR Aats-met -,CG43179 + chr3R_4_14255001 chr3R_14255001 D17-c3 2527 chr3R 14386193 14386237 chr3R 14386302 14386346 4 109 1.0 6.5 3.8 0.8 153 chr3R 14386193 intergenic not near genes chr3R 14386270 intergenic not near genes chr3R 14386346 intergenic not near genes chr3R_4_14385001 chr3R_14385001 D17-c3 2528 chr3R 14527378 14527413 chr3R 14527480 14527515 13 100 9.0 6.5 7.8 1.5 137 chr3R 14527378 intron Pde6 - chr3R 14527446 intron Pde6 - chr3R 14527515 intron Pde6 - chr3R_13_14525001 chr3R_14525001 D17-c3 2529 chr3R 14597597 14597646 chr3R 14597777 14597826 20 176 5.0 5.5 5.2 3.2 229 chr3R 14597597 intron stumps + chr3R 14597712 intron stumps + chr3R 14597826 intron stumps + chr3R_20_14595001 chr3R_14595001 D17-c3 2530 chr3R 14688099 14688143 chr3R 14688205 14688249 7 106 5.0 0.5 2.8 1.8 150 chr3R 14688099 intron Meltrin - chr3R 14688174 intron Meltrin - chr3R 14688249 intron Meltrin - chr3R_7_14685001 chr3R_14685001 D17-c3 2531 chr3R 14704363 14704416 chr3R 14704465 14704513 20 102 6.5 5.5 6.0 2.9 150 chr3R 14704363 intron kibra - chr3R 14704438 intron kibra - chr3R 14704513 intron kibra - chr3R_20_14700001 chr3R_14700001 D17-c3 2532 chr3R 14766165 14766208 chr3R 14766346 14766389 18 181 8.0 8.0 8.0 2.0 224 chr3R 14766165 intron jvl + chr3R 14766277 intron jvl + chr3R 14766389 intron jvl + chr3R_18_14765001 chr3R_14765001 D17-c3 2533 chr3R 14821593 14821646 chr3R 14821765 14821820 15 174 8.0 4.5 6.2 2.1 227 chr3R 14821593 intron btsz - chr3R 14821706 intron btsz - chr3R 14821820 intron btsz - chr3R_15_14820001 chr3R_14820001 D17-c3 2534 chr3R 14833452 14833513 chr3R 14834283 14834333 43 825 8.5 11.5 10.0 3.9 881 chr3R 14833452 intron btsz - chr3R 14833892 intron btsz - chr3R 14834333 intron btsz - chr3R_43_14830001 chr3R_14830001 D17-c3 2535 chr3R 14847931 14847959 chr3R 14848035 14848063 10 104 3.5 3.5 3.5 2.2 132 chr3R 14847931 intron btsz - chr3R 14847997 intron btsz - chr3R 14848063 intron btsz - chr3R_10_14845001 chr3R_14845001 D17-c3 2536 chr3R 14880716 14880772 chr3R 14880957 14880988 32 239 45.0 40.0 42.5 0.7 272 chr3R 14880716 exon CG3631 + chr3R 14880852 intron CG3631 + chr3R 14880988 exon CG3631 + chr3R_32_14880001 chr3R_14880001 D17-c3 2537 chr3R 14881456 14881755 chr3R 14881594 14881889 60 136 47.5 36.0 41.8 1.4 433 chr3R 14881456 exon CG3631 + chr3R 14881672 exon CG3631 + chr3R 14881889 exon CG3631 + chr3R_60_14880001 chr3R_14880001 D17-c3 2538 chr3R 14881760 14881774 chr3R 14881887 14881908 11 132 44.0 44.0 44.0 0.2 148 chr3R 14881760 exon CG3631 + chr3R 14881834 intron CG3631 + chr3R 14881908 exon CG3631 + chr3R_11_14880001 chr3R_14880001 D17-c3 2539 chr3R 14898453 14898502 chr3R 14898598 14898647 16 145 2.5 4.0 3.2 3.8 194 chr3R 14898453 intergenic Nup93-2 -,CG3817 + chr3R 14898550 intergenic Nup93-2 -,CG3817 + chr3R 14898647 intergenic CG3817 +,Nup93-2 - chr3R_16_14895001 chr3R_14895001 D17-c3 2540 chr3R 14923689 14923747 chr3R 14923790 14923849 24 101 10.5 10.5 10.5 2.1 160 chr3R 14923689 3` UTR CR45598 - chr3R 14923769 intergenic CR45598 - chr3R 14923849 intergenic CR45598 - chr3R_24_14920001 chr3R_14920001 D17-c3 2541 chr3R 14944878 14944894 chr3R 14944984 14945000 7 106 8.5 16.0 12.2 0.5 122 chr3R 14944878 intergenic not near genes chr3R 14944939 intergenic not near genes chr3R 14945000 intergenic not near genes chr3R_7_14940001 chr3R_14940001 D17-c3 2542 chr3R 14968342 14968393 chr3R 14968449 14968466 16 104 5.0 17.5 11.2 1.3 124 chr3R 14968342 intergenic not near genes chr3R 14968404 intergenic not near genes chr3R 14968466 intergenic not near genes chr3R_16_14965001 chr3R_14965001 D17-c3 2543 chr3R 15026306 15026342 chr3R 15026417 15026453 12 111 3.0 6.5 4.8 2.1 147 chr3R 15026306 intergenic not near genes chr3R 15026380 intergenic not near genes chr3R 15026453 intergenic not near genes chr3R_12_15025001 chr3R_15025001 D17-c3 2544 chr3R 15041399 15041419 chr3R 15045208 15045228 Doc 10 3809 0.0 7.0 3.5 2.2 3829 chr3R 15041399 intergenic not near genes chr3R 15043314 intergenic not near genes chr3R 15045228 intergenic not near genes chr3R_10_15040001 chr3R_15040001 D17-c3 2545 chr3R 15059253 15059477 chr3R 15059472 15059589 BS 16 198 0.0 0.0 0.0 16.0 336 chr3R 15059253 intron dpr9 - chr3R 15059421 intron dpr9 - chr3R 15059589 intron dpr9 - chr3R_16_15055001 chr3R_15055001 D17-c3 2546 chr3R 15078327 15078374 chr3R 15078429 15078479 20 104 7.0 7.5 7.2 2.4 152 chr3R 15078327 intergenic CG6974 - chr3R 15078403 intergenic CG6974 - chr3R 15078479 intergenic CG6974 - chr3R_20_15075001 chr3R_15075001 D17-c3 2547 chr3R 15079781 15079838 chr3R 15080047 15080104 pogo 24 264 9.5 4.5 7.0 3.0 323 chr3R 15079781 3` UTR CG6966 - chr3R 15079942 3` UTR CG6966 - chr3R 15080104 3` UTR CG6966 - chr3R_24_15075001 chr3R_15075001 D17-c3 2548 chr3R 15084121 15084175 chr3R 15084278 15084332 24 156 6.0 8.0 7.0 3.0 211 chr3R 15084121 intron CG6966 - chr3R 15084226 intron CG6966 - chr3R 15084332 intron CG6966 - chr3R_24_15080001 chr3R_15080001 D17-c3 2549 chr3R 15087136 15087183 chr3R 15087240 15087251 14 100 5.0 1.0 3.0 3.5 115 chr3R 15087136 intron CG6966 - chr3R 15087194 intron CG6966 - chr3R 15087251 intron CG6966 - chr3R_14_15085001 chr3R_15085001 D17-c3 2550 chr3R 15102470 15102525 chr3R 15109752 15109805 412 15 7281 4.0 9.0 6.5 2.0 7335 chr3R 15102470 intron CG42788 - chr3R 15106138 intron CG42788 - chr3R 15109805 intron CG42788 - chr3R_15_15105001 chr3R_15105001 D17-c3 2551 chr3R 15127754 15127806 chr3R 15127859 15127906 11 104 3.0 5.0 4.0 2.2 152 chr3R 15127754 intron CG42788 - chr3R 15127830 intron CG42788 - chr3R 15127906 intron CG42788 - chr3R_11_15125001 chr3R_15125001 D17-c3 2552 chr3R 15132040 15132075 chr3R 15135125 15135160 Juan 39 3085 24.5 22.5 23.5 1.6 3120 chr3R 15132040 intergenic CG42788 - chr3R 15133600 intergenic not near genes chr3R 15135160 3` UTR CG6912 - chr3R_39_15130001 chr3R_15130001 D17-c3 2553 chr3R 15130868 15130876 chr3R 15141204 15141212 5 10336 35.0 67.5 51.2 0.1 10344 chr3R 15130868 intron CG42788 - chr3R 15136040 exon CG6912 - chr3R 15141212 exon CG3987 + chr3R_5_15135001 chr3R_15135001 D17-c3 2554 chr3R 15130867 15130910 chr3R 15141213 15141246 23 10340 46.0 73.0 59.5 0.4 10379 chr3R 15130867 intron CG42788 - chr3R 15136056 exon CG6912 - chr3R 15141246 exon CG3987 + chr3R_23_15135001 chr3R_15135001 D17-c3 2555 chr3R 15160305 15160354 chr3R 15160428 15160479 14 125 4.0 6.0 5.0 2.3 174 chr3R 15160305 intron Gyc88E + chr3R 15160392 intron Gyc88E + chr3R 15160479 intron Gyc88E + chr3R_14_15160001 chr3R_15160001 D17-c3 2556 chr3R 15162520 15162574 chr3R 15167313 15167366 F-element 17 4792 6.0 3.5 4.8 2.9 4846 chr3R 15162520 intron Gyc88E + chr3R 15164943 intron Gyc88E + chr3R 15167366 intron Gyc88E + chr3R_17_15160001 chr3R_15160001 D17-c3 2557 chr3R 15286987 15286989 chr3R 21907534 21907534 7 6620547 24.5 30.5 27.5 0.2 6620547 chr3R 15286987 intron Tm1 + chr3R 18597260 intron,exon qin +,CG14304 - chr3R 21907534 intergenic CG6678 + chr3R_7_18595001 chr3R_18595001 D17-c3 2558 chr3R 15462888 15462938 chr3R 15463000 15463050 17 109 5.0 0.0 2.5 4.9 162 chr3R 15462888 intron AdamTS-A - chr3R 15462969 intron AdamTS-A - chr3R 15463050 intron AdamTS-A - chr3R_17_15460001 chr3R_15460001 D17-c3 2559 chr3R 15592873 15592903 chr3R 15592982 15593012 14 109 8.5 5.0 6.8 1.8 139 chr3R 15592873 intergenic not near genes chr3R 15592942 intergenic not near genes chr3R 15593012 intergenic not near genes chr3R_14_15590001 chr3R_15590001 D17-c3 2560 chr3R 15594655 15594673 chr3R 15594763 15594781 12 108 0.5 12.5 6.5 1.6 126 chr3R 15594655 intergenic not near genes chr3R 15594718 intergenic not near genes chr3R 15594781 intergenic not near genes chr3R_12_15590001 chr3R_15590001 D17-c3 2561 chr3R 15601145 15601191 chr3R 15608692 15608738 412 22 7547 7.0 8.0 7.5 2.6 7593 chr3R 15601145 intergenic not near genes chr3R 15604942 intergenic not near genes chr3R 15608738 intergenic not near genes chr3R_22_15600001 chr3R_15600001 D17-c3 2562 chr3R 15618733 15618762 chr3R 15626232 15626260 blood 11 7499 4.0 5.5 4.8 1.9 7527 chr3R 15618733 intergenic not near genes chr3R 15622496 intergenic not near genes chr3R 15626260 intergenic not near genes chr3R_11_15620001 chr3R_15620001 D17-c3 2563 chr3R 15635183 15635237 chr3R 15635329 15635374 7 143 0.0 1.5 0.8 3.9 191 chr3R 15635183 intergenic CG43335 + chr3R 15635278 intergenic CG43335 + chr3R 15635374 intergenic CG43335 + chr3R_7_15635001 chr3R_15635001 D17-c3 2564 chr3R 15646776 15646798 chr3R 15646884 15646906 10 108 4.0 9.5 6.8 1.3 130 chr3R 15646776 intergenic not near genes chr3R 15646841 intergenic not near genes chr3R 15646906 intergenic not near genes chr3R_10_15645001 chr3R_15645001 D17-c3 2565 chr3R 15734171 15734193 chr3R 15734285 15734309 10 115 10.5 11.5 11.0 0.8 138 chr3R 15734171 intergenic not near genes chr3R 15734240 intergenic not near genes chr3R 15734309 intergenic not near genes chr3R_10_15730001 chr3R_15730001 D17-c3 2566 chr3R 15735220 15735236 chr3R 15739965 15739981 F-element 5 4745 2.5 5.0 3.8 1.0 4761 chr3R 15735220 intergenic not near genes chr3R 15737600 intergenic not near genes chr3R 15739981 intergenic not near genes chr3R_5_15735001 chr3R_15735001 D17-c3 2567 chr3R 16033390 16033440 chr3R 16033496 16033546 17 106 3.0 2.5 2.8 4.5 156 chr3R 16033390 intron pnr + chr3R 16033468 intron pnr + chr3R 16033546 intron pnr + chr3R_17_16030001 chr3R_16030001 D17-c3 2568 chr3R 16472560 16472597 chr3R 16472661 16472684 15 98 13.0 11.0 12.0 1.2 124 chr3R 16472560 intergenic Gyc-89Da + chr3R 16472622 5` UTR Gyc-89Da + chr3R 16472684 5` UTR Gyc-89Da + chr3R_15_16470001 chr3R_16470001 D17-c3 2569 chr3R 16519905 16519932 chr3R 16520023 16520050 15 118 18.5 9.0 13.8 1.0 145 chr3R 16519905 intron CG42342 + chr3R 16519978 intron CG42342 + chr3R 16520050 intron CG42342 + chr3R_15_16515001 chr3R_16515001 D17-c3 2570 chr3R 16534426 16534454 chr3R 16534539 16534567 13 113 8.0 4.5 6.2 1.8 141 chr3R 16534426 intron CG42342 + chr3R 16534496 intron CG42342 + chr3R 16534567 intron CG42342 + chr3R_13_16530001 chr3R_16530001 D17-c3 2571 chr3R 16563681 16563706 chr3R 16563785 16563810 14 104 19.0 18.5 18.8 0.7 129 chr3R 16563681 intron CG42342 + chr3R 16563746 intron CG42342 + chr3R 16563810 intron CG42342 + chr3R_14_16560001 chr3R_16560001 D17-c3 2572 chr3R 16582883 16582916 chr3R 16582987 16583020 19 103 23.0 22.0 22.5 0.8 137 chr3R 16582883 intron Scp2 - chr3R 16582952 intron Scp2 - chr3R 16583020 intron Scp2 - chr3R_19_16580001 chr3R_16580001 D17-c3 2573 chr3R 16731931 16731944 chr3R 16732036 16732049 4 105 2.5 2.5 2.5 1.1 118 chr3R 16731931 intron Ubx - chr3R 16731990 intron Ubx - chr3R 16732049 intron Ubx - chr3R_4_16730001 chr3R_16730001 D17-c3 2574 chr3R 16756297 16756351 chr3R 16762513 16762567 diver 24 6216 3.5 1.5 2.5 6.9 6270 chr3R 16756297 intron bxd - chr3R 16759432 intron bxd - chr3R 16762567 intron bxd - chr3R_24_16755001 chr3R_16755001 D17-c3 2575 chr3R 17120478 17120526 chr3R 17120728 17120776 19 250 10.0 5.0 7.5 2.2 298 chr3R 17120478 intron,5` UTR cher -,CG34278 + chr3R 17120627 intron,exon cher -,CG34278 + chr3R 17120776 intron,3` UTR cher -,CG34278 + chr3R_19_17120001 chr3R_17120001 D17-c3 2576 chr3R 17245471 17245486 chr3R 17245622 17245643 10 156 11.0 21.5 16.2 0.6 172 chr3R 17245471 intron beat-IIb - chr3R 17245557 intron beat-IIb - chr3R 17245643 intron beat-IIb - chr3R_10_17245001 chr3R_17245001 D17-c3 2577 chr3R 17294652 17294693 chr3R 17295105 17295146 BS 23 453 4.5 7.5 6.0 3.3 494 chr3R 17294652 intergenic not near genes chr3R 17294899 intergenic not near genes chr3R 17295146 intergenic not near genes chr3R_23_17290001 chr3R_17290001 D17-c3 2578 chr3R 17335134 17335179 chr3R 17335235 17335280 13 101 8.5 6.5 7.5 1.5 146 chr3R 17335134 intron beat-IIa - chr3R 17335207 intron beat-IIa - chr3R 17335280 intron beat-IIa - chr3R_13_17335001 chr3R_17335001 D17-c3 2579 chr3R 17346246 17346247 chr3R 21907534 21907535 11 4561288 39.0 30.5 34.8 0.3 4561289 chr3R 17346246 intron beat-IIa - chr3R 19626890 intron CG6231 - chr3R 21907535 intergenic CG6678 + chr3R_11_19625001 chr3R_19625001 D17-c3 2580 chr3R 17355478 17355523 chr3R 17355568 17355626 27 98 7.5 5.0 6.2 3.8 148 chr3R 17355478 intron beat-IIa - chr3R 17355552 intron beat-IIa - chr3R 17355626 intron beat-IIa - chr3R_27_17355001 chr3R_17355001 D17-c3 2581 chr3R 17371377 17371431 chr3R 17371479 17371533 27 98 8.0 9.0 8.5 2.8 156 chr3R 17371377 3` UTR CR44256 - chr3R 17371455 3` UTR CR44256 - chr3R 17371533 3` UTR CR44256 - chr3R_27_17370001 chr3R_17370001 D17-c3 2582 chr3R 17415939 17415994 chr3R 17416044 17416089 39 103 10.5 19.5 15.0 2.4 150 chr3R 17415939 exon CG5866 + chr3R 17416014 exon CG5866 + chr3R 17416089 exon CG5866 + chr3R_39_17415001 chr3R_17415001 D17-c3 2583 chr3R 17452524 17452579 chr3R 17452749 17452804 22 225 3.5 3.0 3.2 5.2 280 chr3R 17452524 intergenic not near genes chr3R 17452664 intergenic not near genes chr3R 17452804 intergenic not near genes chr3R_22_17450001 chr3R_17450001 D17-c3 2584 chr3R 17461176 17461231 chr3R 17461283 17461338 16 107 2.5 5.5 4.0 3.2 162 chr3R 17461176 intergenic not near genes chr3R 17461257 intergenic not near genes chr3R 17461338 intergenic not near genes chr3R_16_17460001 chr3R_17460001 D17-c3 2585 chr3R 17467586 17467622 chr3R 17467722 17467758 23 136 6.5 9.5 8.0 2.6 172 chr3R 17467586 intergenic not near genes chr3R 17467672 intergenic not near genes chr3R 17467758 intergenic not near genes chr3R_23_17465001 chr3R_17465001 D17-c3 2586 chr3R 17586691 17586743 chr3R 17586821 17586873 18 130 1.5 5.5 3.5 4.0 182 chr3R 17586691 intergenic not near genes chr3R 17586782 intergenic not near genes chr3R 17586873 intergenic not near genes chr3R_18_17585001 chr3R_17585001 D17-c3 2587 chr3R 17591268 17591323 chr3R 17591729 17591761 F-element 17 458 8.0 7.0 7.5 2.0 493 chr3R 17591268 intergenic not near genes chr3R 17591514 intergenic not near genes chr3R 17591761 intergenic not near genes chr3R_17_17590001 chr3R_17590001 D17-c3 2588 chr3R 17653057 17653113 chr3R 17653172 17653173 7 107 7.0 5.5 6.2 1.0 116 chr3R 17653057 intron,intron CG14322 +,CR45223 - chr3R 17653115 intron,intron CG14322 +,CR45223 - chr3R 17653173 intron,intron CG14322 +,CR45223 - chr3R_7_17650001 chr3R_17650001 D17-c3 2589 chr3R 17725053 17725070 chr3R 17725172 17725188 12 119 11.0 0.0 5.5 1.8 135 chr3R 17725053 intergenic Atg8b - chr3R 17725120 intergenic Atg8b - chr3R 17725188 intergenic Atg8b - chr3R_12_17725001 chr3R_17725001 D17-c3 2590 chr3R 17739172 17739214 chr3R 17739269 17739289 18 99 9.0 10.0 9.5 1.7 117 chr3R 17739172 intron TyrRII + chr3R 17739230 intron TyrRII + chr3R 17739289 intron TyrRII + chr3R_18_17735001 chr3R_17735001 D17-c3 2591 chr3R 17773369 17773393 chr3R 17773474 17773498 11 105 4.5 9.0 6.8 1.4 129 chr3R 17773369 intron CG43102 - chr3R 17773434 intron CG43102 - chr3R 17773498 exon CG43102 - chr3R_11_17770001 chr3R_17770001 D17-c3 2592 chr3R 17823183 17823213 chr3R 17823293 17823323 13 110 9.0 7.5 8.2 1.4 140 chr3R 17823183 intron tinc + chr3R 17823253 intron tinc + chr3R 17823323 intron tinc + chr3R_13_17820001 chr3R_17820001 D17-c3 2593 chr3R 17825896 17825931 chr3R 17826000 17826038 5 106 0.5 7.5 4.0 1.0 142 chr3R 17825896 intron tinc + chr3R 17825967 intron tinc + chr3R 17826038 intron tinc + chr3R_5_17825001 chr3R_17825001 D17-c3 2594 chr3R 17845209 17845215 chr3R 17845295 17845314 9 98 9.0 21.5 15.2 0.6 105 chr3R 17845209 intron tinc + chr3R 17845262 intron tinc + chr3R 17845314 intron tinc + chr3R_9_17845001 chr3R_17845001 D17-c3 2595 chr3R 17856019 17856032 chr3R 17856144 17856157 7 125 16.5 4.0 10.2 0.6 138 chr3R 17856019 intron tinc + chr3R 17856088 intron tinc + chr3R 17856157 intron tinc + chr3R_7_17855001 chr3R_17855001 D17-c3 2596 chr3R 17898347 17898359 chr3R 17898454 17898466 12 107 14.0 26.0 20.0 0.6 119 chr3R 17898347 intron Rim - chr3R 17898406 intron Rim - chr3R 17898466 intron Rim - chr3R_12_17895001 chr3R_17895001 D17-c3 2597 chr3R 17899068 17899084 chr3R 17899171 17899187 4 103 7.0 2.0 4.5 0.7 119 chr3R 17899068 intron Rim - chr3R 17899128 intron Rim - chr3R 17899187 intron Rim - chr3R_4_17895001 chr3R_17895001 D17-c3 2598 chr3R 17925832 17925877 chr3R 17927324 17927367 hobo 15 1492 13.0 6.5 9.8 1.4 1535 chr3R 17925832 intron cpo + chr3R 17926600 intron cpo + chr3R 17927367 intron cpo + chr3R_15_17925001 chr3R_17925001 D17-c3 2599 chr3R 17983195 17983246 chr3R 17983296 17983303 6 94 4.0 2.0 3.0 1.5 108 chr3R 17983195 intron cpo + chr3R 17983249 intron cpo + chr3R 17983303 intron cpo + chr3R_6_17980001 chr3R_17980001 D17-c3 2600 chr3R 18032800 18032807 chr3R 18040498 18040505 opus 5 7698 0.0 18.0 9.0 0.5 7705 chr3R 18032800 intergenic not near genes chr3R 18036652 intergenic not near genes chr3R 18040505 intergenic not near genes chr3R_5_18035001 chr3R_18035001 D17-c3 2601 chr3R 18041738 18041756 chr3R 18041831 18041858 8 101 7.5 0.5 4.0 1.6 120 chr3R 18041738 intergenic not near genes chr3R 18041798 intergenic not near genes chr3R 18041858 intergenic not near genes chr3R_8_18040001 chr3R_18040001 D17-c3 2602 chr3R 18061419 18061458 chr3R 18061536 18061575 7 117 3.5 0.0 1.8 2.5 156 chr3R 18061419 intergenic not near genes chr3R 18061497 intergenic not near genes chr3R 18061575 intergenic not near genes chr3R_7_18060001 chr3R_18060001 D17-c3 2603 chr3R 18067953 18068022 chr3R 18068074 18068129 9 116 0.0 5.5 2.8 2.4 176 chr3R 18067953 intergenic not near genes chr3R 18068041 intergenic not near genes chr3R 18068129 intergenic not near genes chr3R_9_18065001 chr3R_18065001 D17-c3 2604 chr3R 18107117 18107139 chr3R 18107225 18107247 7 108 0.0 11.5 5.8 1.0 130 chr3R 18107117 intron sr + chr3R 18107182 intron sr + chr3R 18107247 intron sr + chr3R_7_18105001 chr3R_18105001 D17-c3 2605 chr3R 18117393 18117414 chr3R 18117495 18117516 4 102 3.0 3.5 3.2 1.0 123 chr3R 18117393 intron sr + chr3R 18117454 intron sr + chr3R 18117516 intron sr + chr3R_4_18115001 chr3R_18115001 D17-c3 2606 chr3R 18119721 18119746 chr3R 18119823 18119848 12 102 6.0 5.0 5.5 1.8 127 chr3R 18119721 intron sr + chr3R 18119784 intron sr + chr3R 18119848 intron sr + chr3R_12_18115001 chr3R_18115001 D17-c3 2607 chr3R 18143472 18143512 chr3R 18143584 18143625 7 111 2.5 0.5 1.5 2.8 153 chr3R 18143472 intergenic not near genes chr3R 18143548 intergenic not near genes chr3R 18143625 intergenic not near genes chr3R_7_18140001 chr3R_18140001 D17-c3 2608 chr3R 18157573 18157621 chr3R 18157704 18157754 7 132 1.0 8.0 4.5 1.3 181 chr3R 18157573 intergenic CR45103 + chr3R 18157664 intergenic CR45103 + chr3R 18157754 5` UTR CR45103 + chr3R_7_18155001 chr3R_18155001 D17-c3 2609 chr3R 18215746 18215766 chr3R 18215940 18215960 7 194 4.5 10.0 7.2 0.9 214 chr3R 18215746 intergenic CG14314 + chr3R 18215853 intergenic CG14314 + chr3R 18215960 intergenic CG14314 + chr3R_7_18215001 chr3R_18215001 D17-c3 2610 chr3R 18215743 18215753 chr3R 18295875 18295885 6 80132 4.0 31.5 17.8 0.3 80142 chr3R 18215743 intergenic CG14314 + chr3R 18255814 intron,intron Tgs1 +,moi + chr3R 18295885 intron l(3)05822 - chr3R_6_18255001 chr3R_18255001 D17-c3 2611 chr3R 18299264 18299322 chr3R 18302607 18302665 19 3343 63.0 51.5 57.2 0.3 3401 chr3R 18299264 5` UTR Dlc90F + chr3R 18300964 exon CG18600 - chr3R 18302665 exon CG7126 - chr3R_19_18300001 chr3R_18300001 D17-c3 2612 chr3R 18328563 18328587 chr3R 18328664 18328688 8 101 7.5 21.0 14.2 0.5 125 chr3R 18328563 intron CG31235 - chr3R 18328626 intron CG31235 - chr3R 18328688 intron CG31235 - chr3R_8_18325001 chr3R_18325001 D17-c3 2613 chr3R 18331759 18331766 chr3R 18333278 18333285 hopper2 5 1519 13.0 8.0 10.5 0.4 1526 chr3R 18331759 3` UTR CG15803 - chr3R 18332522 intron CG15803 - chr3R 18333285 3` UTR CG15803 - chr3R_5_18330001 chr3R_18330001 D17-c3 2614 chr3R 18464396 18464403 chr3R 18464497 18464504 5 101 1.0 7.5 4.2 1.0 108 chr3R 18464396 intron fru - chr3R 18464450 intron fru - chr3R 18464504 intron fru - chr3R_5_18460001 chr3R_18460001 D17-c3 2615 chr3R 18481167 18481209 chr3R 18481281 18481313 10 109 0.0 9.5 4.8 1.7 146 chr3R 18481167 intron fru - chr3R 18481240 intron fru - chr3R 18481313 intron fru - chr3R_10_18480001 chr3R_18480001 D17-c3 2616 chr3R 18501580 18501623 chr3R 18501686 18501729 27 106 6.0 12.5 9.2 2.6 149 chr3R 18501580 intron fru - chr3R 18501654 intron fru - chr3R 18501729 intron fru - chr3R_27_18500001 chr3R_18500001 D17-c3 2617 chr3R 18528341 18528397 chr3R 18528453 18528498 29 111 6.0 4.0 5.0 4.8 157 chr3R 18528341 intron fru - chr3R 18528420 intron fru - chr3R 18528498 intron fru - chr3R_29_18525001 chr3R_18525001 D17-c3 2618 chr3R 18553191 18553216 chr3R 18553340 18553365 8 149 11.0 3.0 7.0 1.0 174 chr3R 18553191 intergenic not near genes chr3R 18553278 intergenic not near genes chr3R 18553365 intergenic not near genes chr3R_8_18550001 chr3R_18550001 D17-c3 2619 chr3R 18606479 18606527 chr3R 18610736 18610783 F-element 15 4257 6.0 4.0 5.0 2.5 4304 chr3R 18606479 intron,intron qin +,CG14304 - chr3R 18608631 intron,intron qin +,CG14304 - chr3R 18610783 intron,intron qin +,CG14304 - chr3R_15_18605001 chr3R_18605001 D17-c3 2620 chr3R 18618246 18618296 chr3R 18618355 18618406 14 110 5.5 6.5 6.0 2.0 160 chr3R 18618246 intron,intron qin +,CG14304 - chr3R 18618326 intron,intron qin +,CG14304 - chr3R 18618406 intron,intron qin +,CG14304 - chr3R_14_18615001 chr3R_18615001 D17-c3 2621 chr3R 18644081 18644135 chr3R 18644183 18644237 14 102 5.5 5.5 5.5 2.2 156 chr3R 18644081 intron qin + chr3R 18644159 intron qin + chr3R 18644237 intron qin + chr3R_14_18640001 chr3R_18640001 D17-c3 2622 chr3R 18781677 18781727 chr3R 18781778 18781818 11 95 3.0 9.0 6.0 1.6 141 chr3R 18781677 intron CG7720 - chr3R 18781748 intron CG7720 - chr3R 18781818 intron CG7720 - chr3R_11_18780001 chr3R_18780001 D17-c3 2623 chr3R 18807306 18807334 chr3R 18807407 18807435 8 101 3.5 0.0 1.8 2.9 129 chr3R 18807306 intron CG18208 - chr3R 18807370 intron CG18208 - chr3R 18807435 intron CG18208 - chr3R_8_18805001 chr3R_18805001 D17-c3 2624 chr3R 18839787 18839834 chr3R 18839896 18839943 17 108 4.5 8.5 6.5 2.3 156 chr3R 18839787 intron CG18208 - chr3R 18839865 intron CG18208 - chr3R 18839943 intron CG18208 - chr3R_17_18835001 chr3R_18835001 D17-c3 2625 chr3R 18887577 18887599 chr3R 18887683 18887700 6 105 9.5 6.5 8.0 0.7 123 chr3R 18887577 intergenic not near genes chr3R 18887638 intergenic not near genes chr3R 18887700 intergenic not near genes chr3R_6_18885001 chr3R_18885001 D17-c3 2626 chr3R 18948058 18948073 chr3R 18952171 18952186 6 4113 22.5 24.5 23.5 0.2 4128 chr3R 18948058 intron CG42613 + chr3R 18950122 intron CG42613 + chr3R 18952186 intron,intron CG42613 +,CG43732 + chr3R_6_18950001 chr3R_18950001 D17-c3 2627 chr3R 19085653 19085678 chr3R 19086016 19086041 5 363 4.5 7.0 5.8 0.7 388 chr3R 19085653 intron cdi - chr3R 19085847 intron cdi - chr3R 19086041 intron cdi - chr3R_5_19085001 chr3R_19085001 D17-c3 2628 chr3R 19276905 19276934 chr3R 19277010 19277039 7 104 3.5 0.5 2.0 2.3 134 chr3R 19276905 intergenic not near genes chr3R 19276972 intergenic not near genes chr3R 19277039 intergenic not near genes chr3R_7_19275001 chr3R_19275001 D17-c3 2629 chr3R 19280530 19280586 chr3R 19280630 19280687 14 100 3.0 2.0 2.5 4.0 157 chr3R 19280530 intergenic not near genes chr3R 19280608 intergenic not near genes chr3R 19280687 intergenic not near genes chr3R_14_19280001 chr3R_19280001 D17-c3 2630 chr3R 19490422 19490451 chr3R 19490536 19490565 11 114 6.5 6.0 6.2 1.5 143 chr3R 19490422 intron,exon Dys +,CG15025 - chr3R 19490494 intron,intron Dys +,CG15025 - chr3R 19490565 intron,intron Dys +,CG15025 - chr3R_11_19490001 chr3R_19490001 D17-c3 2631 chr3R 19490452 19490462 chr3R 19490531 19490569 8 104 5.5 5.5 5.5 1.2 117 chr3R 19490452 intron,intron Dys +,CG15025 - chr3R 19490510 intron,intron Dys +,CG15025 - chr3R 19490569 intron,intron Dys +,CG15025 - chr3R_8_19490001 chr3R_19490001 D17-c3 2632 chr3R 19590627 19590682 chr3R 19590739 19590792 13 116 0.0 10.5 5.2 2.1 165 chr3R 19590627 exon Dys + chr3R 19590710 intron Dys + chr3R 19590792 exon Dys + chr3R_13_19590001 chr3R_19590001 D17-c3 2633 chr3R 19591514 19591550 chr3R 19591620 19591656 5 106 4.5 3.5 4.0 1.0 142 chr3R 19591514 intron Dys + chr3R 19591585 intron Dys + chr3R 19591656 intron Dys + chr3R_5_19590001 chr3R_19590001 D17-c3 2634 chr3R 19599036 19599094 chr3R 19599291 19599349 28 254 10.0 11.0 10.5 2.4 313 chr3R 19599036 intergenic Cpr92A - chr3R 19599192 intergenic Cpr92A - chr3R 19599349 intergenic Cpr92A - chr3R_28_19595001 chr3R_19595001 D17-c3 2635 chr3R 19602738 19602771 chr3R 19602841 19602874 11 103 10.5 8.5 9.5 1.0 136 chr3R 19602738 intergenic CG7333 + chr3R 19602806 intergenic CG7333 + chr3R 19602874 intergenic CG7333 +,CG7342 + chr3R_11_19600001 chr3R_19600001 D17-c3 2636 chr3R 19638466 19638521 chr3R 19638577 19638632 11 110 4.0 5.5 4.8 1.9 166 chr3R 19638466 intron subdued - chr3R 19638549 intron subdued - chr3R 19638632 intron subdued - chr3R_11_19635001 chr3R_19635001 D17-c3 2637 chr3R 19678463 19678518 chr3R 19678580 19678635 29 116 6.0 2.5 4.2 5.6 172 chr3R 19678463 intron Naam + chr3R 19678549 intron Naam + chr3R 19678635 intron Naam + chr3R_29_19675001 chr3R_19675001 D17-c3 2638 chr3R 19693446 19693454 chr3R 19693548 19693562 4 105 13.5 8.5 11.0 0.3 116 chr3R 19693446 intron Naam + chr3R 19693504 intron Naam + chr3R 19693562 intron Naam + chr3R_4_19690001 chr3R_19690001 D17-c3 2639 chr3R 19734001 19734009 chr3R 19734104 19734112 6 103 5.0 2.5 3.8 1.2 111 chr3R 19734001 intron GluClalpha + chr3R 19734056 intron GluClalpha + chr3R 19734112 intron GluClalpha + chr3R_6_19730001 chr3R_19730001 D17-c3 2640 chr3R 19827500 19827556 chr3R 19827611 19827667 24 110 9.5 5.0 7.2 2.9 167 chr3R 19827500 intron bnl - chr3R 19827584 intron bnl - chr3R 19827667 exon bnl - chr3R_24_19825001 chr3R_19825001 D17-c3 2641 chr3R 19846936 19846966 chr3R 19847120 19847151 9 185 2.5 0.0 1.2 4.1 215 chr3R 19846936 intergenic CG4662 + chr3R 19847044 intergenic CG4662 + chr3R 19847151 intergenic CG4662 + chr3R_9_19845001 chr3R_19845001 D17-c3 2642 chr3R 19848284 19848293 chr3R 19848416 19848425 4 132 0.0 2.0 1.0 2.0 141 chr3R 19848284 intron CG4662 + chr3R 19848354 intron CG4662 + chr3R 19848425 intron CG4662 + chr3R_4_19845001 chr3R_19845001 D17-c3 2643 chr3R 19908282 19908304 chr3R 19908374 19908413 13 107 0.0 9.5 4.8 2.2 131 chr3R 19908282 intron RhoGAP92B + chr3R 19908348 intron RhoGAP92B + chr3R 19908413 intron,3` UTR RhoGAP92B +,CR45048 - chr3R_13_19905001 chr3R_19905001 D17-c3 2644 chr3R 19943858 19943877 chr3R 19943963 19943978 5 104 9.5 0.0 4.8 0.9 120 chr3R 19943858 intron Hs6st - chr3R 19943918 intron Hs6st - chr3R 19943978 intron Hs6st - chr3R_5_19940001 chr3R_19940001 D17-c3 2645 chr3R 19953923 19953976 chr3R 19954025 19954078 26 99 10.0 8.5 9.2 2.5 155 chr3R 19953923 intron Hs6st - chr3R 19954000 intron Hs6st - chr3R 19954078 intron Hs6st - chr3R_26_19950001 chr3R_19950001 D17-c3 2646 chr3R 19964990 19965047 chr3R 19965104 19965161 16 110 4.0 4.0 4.0 3.2 171 chr3R 19964990 intron Hs6st - chr3R 19965076 intron Hs6st - chr3R 19965161 intron Hs6st - chr3R_16_19965001 chr3R_19965001 D17-c3 2647 chr3R 19981434 19981452 chr3R 19981539 19981557 6 105 5.5 4.0 4.8 1.0 123 chr3R 19981434 intron Hs6st - chr3R 19981496 intron Hs6st - chr3R 19981557 intron Hs6st - chr3R_6_19980001 chr3R_19980001 D17-c3 2648 chr3R 20008797 20008852 chr3R 20008903 20008958 25 106 4.0 9.0 6.5 3.3 161 chr3R 20008797 intergenic MED25 +,Hs6st - chr3R 20008878 intergenic MED25 +,Hs6st - chr3R 20008958 5` UTR MED25 + chr3R_25_20005001 chr3R_20005001 D17-c3 2649 chr3R 20156674 20156719 chr3R 20165869 20165914 roo 11 9194 7.5 7.0 7.2 1.3 9240 chr3R 20156674 intergenic not near genes chr3R 20161294 intergenic not near genes chr3R 20165914 intergenic not near genes chr3R_11_20160001 chr3R_20160001 D17-c3 2650 chr3R 20330977 20331025 chr3R 20331488 20331536 roo 14 510 2.0 1.5 1.8 5.0 559 chr3R 20330977 intergenic Sirt2 + chr3R 20331256 intergenic Sirt2 + chr3R 20331536 intergenic not near genes chr3R_14_20330001 chr3R_20330001 D17-c3 2651 chr3R 20661335 20661377 chr3R 20661607 20661640 15 277 10.0 6.5 8.2 1.6 305 chr3R 20661335 intergenic not near genes chr3R 20661488 intergenic not near genes chr3R 20661640 intergenic not near genes chr3R_15_20660001 chr3R_20660001 D17-c3 2652 chr3R 20707722 20707769 chr3R 20707962 20708009 27 240 3.0 4.0 3.5 6.0 287 chr3R 20707722 intron Oamb - chr3R 20707866 intron Oamb - chr3R 20708009 intron Oamb - chr3R_27_20705001 chr3R_20705001 D17-c3 2653 chr3R 20722831 20722884 chr3R 20722982 20723036 28 150 6.5 13.5 10.0 2.5 205 chr3R 20722831 intergenic not near genes chr3R 20722934 intergenic not near genes chr3R 20723036 intergenic not near genes chr3R_28_20720001 chr3R_20720001 D17-c3 2654 chr3R 20730910 20731053 chr3R 20731035 20731166 16 118 0.0 0.0 0.0 16.0 256 chr3R 20730910 intergenic not near genes chr3R 20731038 intergenic not near genes chr3R 20731166 intergenic CG31205 + chr3R_16_20730001 chr3R_20730001 D17-c3 2655 chr3R 20771705 20771728 chr3R 20771796 20771802 7 95 0.0 11.0 5.5 1.1 97 chr3R 20771705 intron,intron Syp +,Takl1 - chr3R 20771754 intron,intron Syp +,Takl1 - chr3R 20771802 intron,exon Syp +,Takl1 - chr3R_7_20770001 chr3R_20770001 D17-c3 2656 chr3R 20787414 20787426 chr3R 20787530 20787542 6 116 17.0 5.5 11.2 0.5 128 chr3R 20787414 intron Syp + chr3R 20787478 intron Syp + chr3R 20787542 intron Syp + chr3R_6_20785001 chr3R_20785001 D17-c3 2657 chr3R 20787428 20787458 chr3R 20787529 20787574 11 115 8.0 5.5 6.8 1.4 146 chr3R 20787428 intron Syp + chr3R 20787501 intron Syp + chr3R 20787574 intron Syp + chr3R_11_20785001 chr3R_20785001 D17-c3 2658 chr3R 20841545 20841597 chr3R 20841733 20841783 18 188 8.5 4.0 6.2 2.5 238 chr3R 20841545 intergenic not near genes chr3R 20841664 intergenic CG15695 + chr3R 20841783 intergenic CG15695 + chr3R_18_20840001 chr3R_20840001 D17-c3 2659 chr3R 20848343 20848354 chr3R 20848457 20848469 4 115 1.0 8.5 4.8 0.7 126 chr3R 20848343 intergenic not near genes chr3R 20848406 intergenic not near genes chr3R 20848469 intergenic not near genes chr3R_4_20845001 chr3R_20845001 D17-c3 2660 chr3R 20850060 20850108 chr3R 20850170 20850218 6 110 1.0 1.0 1.0 3.0 158 chr3R 20850060 intergenic RpS30 + chr3R 20850139 intergenic RpS30 + chr3R 20850218 intergenic RpS30 + chr3R_6_20850001 chr3R_20850001 D17-c3 2661 chr3R 20854447 20854517 chr3R 20859267 20859301 Doc 10 4805 1.0 4.5 2.8 2.6 4854 chr3R 20854447 intron Ir93a - chr3R 20856874 intron Ir93a - chr3R 20859301 exon Ir93a - chr3R_10_20855001 chr3R_20855001 D17-c3 2662 chr3R 20870226 20870280 chr3R 20870336 20870390 24 110 9.5 8.0 8.8 2.4 164 chr3R 20870226 intergenic not near genes chr3R 20870308 intergenic not near genes chr3R 20870390 intergenic not near genes chr3R_24_20870001 chr3R_20870001 D17-c3 2663 chr3R 20901319 20901376 chr3R 20901430 20901465 32 105 9.0 9.5 9.2 3.1 146 chr3R 20901319 intergenic not near genes chr3R 20901392 intergenic not near genes chr3R 20901465 intergenic CG5621 + chr3R_32_20900001 chr3R_20900001 D17-c3 2664 chr3R 21013990 21014044 chr3R 21014093 21014147 26 103 6.5 8.0 7.2 3.2 157 chr3R 21013990 3` UTR Calx + chr3R 21014068 3` UTR Calx + chr3R 21014147 3` UTR Calx + chr3R_26_21010001 chr3R_21010001 D17-c3 2665 chr3R 21021615 21021640 chr3R 21021723 21021748 9 108 19.0 27.5 23.2 0.4 133 chr3R 21021615 intron CG17278 - chr3R 21021682 intron CG17278 - chr3R 21021748 intron CG17278 - chr3R_9_21020001 chr3R_21020001 D17-c3 2666 chr3R 21021642 21021664 chr3R 21021715 21021755 21 97 13.0 25.0 19.0 1.1 113 chr3R 21021642 intron CG17278 - chr3R 21021698 intron CG17278 - chr3R 21021755 intron CG17278 - chr3R_21_21020001 chr3R_21020001 D17-c3 2667 chr3R 21049157 21049199 chr3R 21049316 21049358 6 159 1.5 4.5 3.0 1.5 201 chr3R 21049157 intergenic CG7079 - chr3R 21049258 intergenic CG7079 - chr3R 21049358 intergenic not near genes chr3R_6_21045001 chr3R_21045001 D17-c3 2668 chr3R 21108013 21108056 chr3R 21108299 21108337 22 286 3.5 2.5 3.0 5.5 324 chr3R 21108013 intergenic Sec15 -,rtet + chr3R 21108175 intergenic Sec15 -,rtet + chr3R 21108337 intergenic rtet +,Sec15 - chr3R_22_21105001 chr3R_21105001 D17-c3 2669 chr3R 21129795 21130007 chr3R 21129909 21130109 12 110 0.5 1.0 0.8 6.7 314 chr3R 21129795 intergenic Obp93a -,CG5793 +,Ice2 + chr3R 21129952 intergenic Obp93a -,Ice2 +,CG5793 + chr3R 21130109 intergenic Ice2 +,Obp93a - chr3R_12_21125001 chr3R_21125001 D17-c3 2670 chr3R 21132606 21132647 chr3R 21132714 21132755 8 108 5.5 0.0 2.8 2.1 149 chr3R 21132606 3` UTR Ice2 + chr3R 21132680 3` UTR Ice2 + chr3R 21132755 exon CG7009 - chr3R_8_21130001 chr3R_21130001 D17-c3 2671 chr3R 21141651 21141706 chr3R 21150157 21150211 Tirant 17 8503 4.5 12.5 8.5 1.8 8560 chr3R 21141651 intron SNF4Agamma + chr3R 21145931 intron SNF4Agamma + chr3R 21150211 intron SNF4Agamma + chr3R_17_21145001 chr3R_21145001 D17-c3 2672 chr3R 21152006 21152020 chr3R 21152107 21152121 4 101 0.5 4.0 2.2 1.2 115 chr3R 21152006 intron SNF4Agamma + chr3R 21152064 intron SNF4Agamma + chr3R 21152121 intron SNF4Agamma + chr3R_4_21150001 chr3R_21150001 D17-c3 2673 chr3R 21154546 21154583 chr3R 21154785 21154823 17 240 4.5 6.5 5.5 2.6 277 chr3R 21154546 intron SNF4Agamma + chr3R 21154684 intron SNF4Agamma + chr3R 21154823 intron SNF4Agamma + chr3R_17_21150001 chr3R_21150001 D17-c3 2674 chr3R 21163245 21163261 chr3R 21163348 21163364 4 103 13.5 10.5 12.0 0.3 119 chr3R 21163245 intron SNF4Agamma + chr3R 21163304 intron SNF4Agamma + chr3R 21163364 intron SNF4Agamma + chr3R_4_21160001 chr3R_21160001 D17-c3 2675 chr3R 21163266 21163271 chr3R 21163344 21163349 4 84 10.5 10.0 10.2 0.4 83 chr3R 21163266 intron SNF4Agamma + chr3R 21163308 intron SNF4Agamma + chr3R 21163349 intron SNF4Agamma + chr3R_4_21160001 chr3R_21160001 D17-c3 2676 chr3R 21189671 21189723 chr3R 21189773 21189826 8 102 2.5 4.5 3.5 1.8 155 chr3R 21189671 intron SNF4Agamma + chr3R 21189748 intron SNF4Agamma + chr3R 21189826 intron SNF4Agamma + chr3R_8_21185001 chr3R_21185001 D17-c3 2677 chr3R 21200382 21200432 chr3R 21200484 21200534 28 100 7.0 9.0 8.0 3.1 152 chr3R 21200382 intron SNF4Agamma + chr3R 21200458 intron SNF4Agamma + chr3R 21200534 intron SNF4Agamma + chr3R_28_21200001 chr3R_21200001 D17-c3 2678 chr3R 21214720 21214752 chr3R 21214917 21214929 11 195 3.0 8.0 5.5 1.7 209 chr3R 21214720 intergenic CG5862 + chr3R 21214824 intergenic CG5862 + chr3R 21214929 intergenic CG5862 + chr3R_11_21210001 chr3R_21210001 D17-c3 2679 chr3R 21310909 21311011 chr3R 21314433 21314548 5 3532 20.0 1.0 10.5 0.4 3639 chr3R 21310909 5` UTR Hsromega + chr3R 21312728 5` UTR Hsromega + chr3R 21314548 5` UTR Hsromega + chr3R_5_21310001 chr3R_21310001 D17-c3 2680 chr3R 21322948 21322971 chr3R 21323052 21323074 8 104 22.5 1.0 11.8 0.6 126 chr3R 21322948 exon CG16791 - chr3R 21323011 intron CG16791 - chr3R 21323074 intron CG16791 - chr3R_8_21320001 chr3R_21320001 D17-c3 2681 chr3R 21379456 21379465 chr3R 21379632 21379641 8 176 5.0 8.5 6.8 1.0 185 chr3R 21379456 intron tin + chr3R 21379548 intron tin + chr3R 21379641 intron tin + chr3R_8_21375001 chr3R_21375001 D17-c3 2682 chr3R 21464386 21464428 chr3R 21464497 21464537 5 109 1.0 1.0 1.0 2.5 151 chr3R 21464386 intergenic not near genes chr3R 21464462 intergenic not near genes chr3R 21464537 intergenic not near genes chr3R_5_21460001 chr3R_21460001 D17-c3 2683 chr3R 21471995 21472029 chr3R 21472101 21472135 11 106 14.5 11.5 13.0 0.8 140 chr3R 21471995 intergenic not near genes chr3R 21472065 intergenic not near genes chr3R 21472135 intergenic not near genes chr3R_11_21470001 chr3R_21470001 D17-c3 2684 chr3R 21506857 21506913 chr3R 21506968 21507018 18 108 5.5 8.5 7.0 2.2 161 chr3R 21506857 intron C15 + chr3R 21506938 intron C15 + chr3R 21507018 intron C15 + chr3R_18_21505001 chr3R_21505001 D17-c3 2685 chr3R 21517994 21518272 chr3R 21518148 21518381 10 122 1.5 0.0 0.8 5.6 387 chr3R 21517994 intergenic not near genes chr3R 21518188 intergenic not near genes chr3R 21518381 intergenic not near genes chr3R_10_21515001 chr3R_21515001 D17-c3 2686 chr3R 21519961 21520133 chr3R 21520087 21520252 37 123 1.5 1.5 1.5 14.8 291 chr3R 21519961 intergenic not near genes chr3R 21520106 intergenic not near genes chr3R 21520252 intergenic not near genes chr3R_37_21520001 chr3R_21520001 D17-c3 2687 chr3R 21624080 21624121 chr3R 21624199 21624240 22 119 8.5 5.0 6.8 2.8 160 chr3R 21624080 exon E2f - chr3R 21624160 intron E2f - chr3R 21624240 intron E2f - chr3R_22_21620001 chr3R_21620001 D17-c3 2688 chr3R 21709528 21709582 chr3R 21709962 21710016 21 433 4.0 9.0 6.5 2.8 488 chr3R 21709528 intron CG31176 - chr3R 21709772 intron CG31176 - chr3R 21710016 intron CG31176 - chr3R_21_21705001 chr3R_21705001 D17-c3 2689 chr3R 21735481 21735529 chr3R 21735580 21735631 9 100 8.5 8.5 8.5 0.9 150 chr3R 21735481 intergenic Sfp93F - chr3R 21735556 intergenic Sfp93F - chr3R 21735631 intergenic Sfp93F - chr3R_9_21735001 chr3R_21735001 D17-c3 2690 chr3R 21757196 21757248 chr3R 21758390 21758442 15 1195 81.0 36.5 58.8 0.3 1246 chr3R 21757196 exon CG31198 + chr3R 21757819 intergenic CG31198 + chr3R 21758442 intergenic CG42335 + chr3R_15_21755001 chr3R_21755001 D17-c3 2691 chr3R 21761099 21761114 chr3R 21768516 21768531 mdg1 12 7416 25.0 18.0 21.5 0.5 7432 chr3R 21761099 exon CG42335 + chr3R 21764815 intron CG42335 + chr3R 21768531 exon CG42335 + chr3R_12_21760001 chr3R_21760001 D17-c3 2692 chr3R 21761116 21761142 chr3R 21768514 21768534 mdg1 13 7406 12.0 16.5 14.2 0.9 7418 chr3R 21761116 exon CG42335 + chr3R 21764825 intron CG42335 + chr3R 21768534 exon CG42335 + chr3R_13_21760001 chr3R_21760001 D17-c3 2693 chr3R 21761143 21761155 chr3R 21768510 21768566 mdg1 10 7408 8.5 14.5 11.5 0.8 7423 chr3R 21761143 exon CG42335 + chr3R 21764854 intron CG42335 + chr3R 21768566 exon CG42335 + chr3R_10_21760001 chr3R_21760001 D17-c3 2694 chr3R 21784843 21784860 chr3R 21784966 21784983 11 123 16.0 0.0 8.0 1.2 140 chr3R 21784843 3` UTR,3` UTR CASK -,CRG - chr3R 21784913 3` UTR,3` UTR CASK -,CRG - chr3R 21784983 3` UTR,3` UTR CASK -,CRG - chr3R_11_21780001 chr3R_21780001 D17-c3 2695 chr3R 21845865 21845919 chr3R 21846061 21846115 14 196 6.0 8.5 7.2 1.7 250 chr3R 21845865 5` UTR,exon CR44087 +,Gr93d - chr3R 21845990 intron,exon CR44087 +,Gr93d - chr3R 21846115 5` UTR,exon CR44087 +,Gr93d - chr3R_14_21845001 chr3R_21845001 D17-c3 2696 chr3R 21858270 21858283 chr3R 21861038 21861051 5 2768 45.0 8.5 26.8 0.2 2781 chr3R 21858270 intergenic not near genes chr3R 21859660 intergenic not near genes chr3R 21861051 intergenic CR45644 -,CR45645 - chr3R_5_21855001 chr3R_21855001 D17-c3 2697 chr3R 21903613 21903637 chr3R 21903735 21903759 10 122 0.0 6.5 3.2 2.4 146 chr3R 21903613 intron CG6678 + chr3R 21903686 intron CG6678 + chr3R 21903759 intron CG6678 + chr3R_10_21900001 chr3R_21900001 D17-c3 2698 chr3R 8339246 8339247 chr3R 21907534 21907534 30 13568288 35.5 30.5 33.0 0.9 13568288 chr3R 8339246 intergenic not near genes chr3R 15123390 intron CG42788 - chr3R 21907534 intergenic CG6678 + chr3R_30_15120001 chr3R_15120001 D17-c3 2699 chr3R 9620954 9620957 chr3R 21907534 21907534 8 12286578 31.5 30.5 31.0 0.2 12286580 chr3R 9620954 intron CG8312 + chr3R 15764244 intergenic not near genes chr3R 21907534 intergenic CG6678 + chr3R_8_15760001 chr3R_15760001 D17-c3 2700 chr3R 15286987 15286988 chr3R 21907534 21907534 9 6620546 24.5 30.5 27.5 0.3 6620547 chr3R 15286987 intron Tm1 + chr3R 18597260 intron,exon qin +,CG14304 - chr3R 21907534 intergenic CG6678 + chr3R_9_18595001 chr3R_18595001 D17-c3 2701 chr3R 21907534 21907534 chr3R 28831798 28831802 32 6924268 33.5 39.5 36.5 0.9 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_32_25365001 chr3R_25365001 D17-c3 2702 chr3R 8339246 8339247 chr3R 21907535 21907535 15 13568288 35.5 30.5 33.0 0.4 13568289 chr3R 8339246 intergenic not near genes chr3R 15123390 intron CG42788 - chr3R 21907535 intergenic CG6678 + chr3R_15_15120001 chr3R_15120001 D17-c3 2703 chr3R 9620955 9620957 chr3R 21907535 21907535 18 12286579 31.5 30.5 31.0 0.6 12286580 chr3R 9620955 intron CG8312 + chr3R 15764245 intergenic not near genes chr3R 21907535 intergenic CG6678 + chr3R_18_15760001 chr3R_15760001 D17-c3 2704 chr3R 21907535 21907535 chr3R 28831801 28831803 46 6924266 33.5 39.0 36.2 1.2 6924268 chr3R 21907535 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831803 intron WASp - chr3R_46_25365001 chr3R_25365001 D17-c3 2705 chr3R 8339246 8339247 chr3R 21907536 21907536 5 13568289 35.5 30.5 33.0 0.1 13568290 chr3R 8339246 intergenic not near genes chr3R 15123391 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_5_15120001 chr3R_15120001 D17-c3 2706 chr3R 9620956 9620957 chr3R 21907536 21907536 13 12286580 31.5 30.5 31.0 0.4 12286580 chr3R 9620956 intron CG8312 + chr3R 15764246 intergenic not near genes chr3R 21907536 intergenic CG6678 + chr3R_13_15760001 chr3R_15760001 D17-c3 2707 chr3R 21907536 21907536 chr3R 28831801 28831802 90 6924266 33.5 39.0 36.2 2.4 6924266 chr3R 21907536 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831802 intron WASp - chr3R_90_25365001 chr3R_25365001 D17-c3 2708 chr3R 21919008 21919016 chr3R 21919112 21919121 4 105 1.0 13.0 7.0 0.5 113 chr3R 21919008 intergenic not near genes chr3R 21919064 intergenic not near genes chr3R 21919121 intergenic not near genes chr3R_4_21915001 chr3R_21915001 D17-c3 2709 chr3R 21985208 21985245 chr3R 21985338 21985374 11 128 5.0 2.0 3.5 2.4 166 chr3R 21985208 intron Eip93F + chr3R 21985291 intron Eip93F + chr3R 21985374 intron Eip93F + chr3R_11_21985001 chr3R_21985001 D17-c3 2710 chr3R 22055534 22055587 chr3R 22055748 22055800 24 213 5.5 8.0 6.8 3.1 266 chr3R 22055534 intron how + chr3R 22055667 intron how + chr3R 22055800 intron how + chr3R_24_22055001 chr3R_22055001 D17-c3 2711 chr3R 22069804 22069855 chr3R 22069924 22069975 19 118 3.0 3.0 3.0 4.8 171 chr3R 22069804 intron how + chr3R 22069890 intron how + chr3R 22069975 intron how + chr3R_19_22065001 chr3R_22065001 D17-c3 2712 chr3R 22084605 22084625 chr3R 22084719 22084739 7 114 1.5 7.5 4.5 1.3 134 chr3R 22084605 intergenic not near genes chr3R 22084672 intergenic not near genes chr3R 22084739 intergenic not near genes chr3R_7_22080001 chr3R_22080001 D17-c3 2713 chr3R 22144952 22145001 chr3R 22145134 22145188 41 186 12.0 5.5 8.8 4.2 236 chr3R 22144952 intron SKIP + chr3R 22145070 intron SKIP + chr3R 22145188 intron SKIP + chr3R_41_22145001 chr3R_22145001 D17-c3 2714 chr3R 22153556 22153602 chr3R 22153661 22153707 30 105 8.0 10.5 9.2 2.9 151 chr3R 22153556 intron SKIP + chr3R 22153632 intron SKIP + chr3R 22153707 intron SKIP + chr3R_30_22150001 chr3R_22150001 D17-c3 2715 chr3R 22234062 22234095 chr3R 22234164 22234197 11 102 7.0 10.5 8.8 1.1 135 chr3R 22234062 intron SKIP + chr3R 22234130 intron SKIP + chr3R 22234197 intron SKIP + chr3R_11_22230001 chr3R_22230001 D17-c3 2716 chr3R 22234664 22234685 chr3R 22236008 22236029 pogo 8 1344 9.5 5.0 7.2 1.0 1365 chr3R 22234664 intron SKIP + chr3R 22235346 intron SKIP + chr3R 22236029 intron SKIP + chr3R_8_22235001 chr3R_22235001 D17-c3 2717 chr3R 22234687 22234715 chr3R 22236005 22236059 pogo 14 1340 3.5 5.0 4.2 2.7 1372 chr3R 22234687 intron SKIP + chr3R 22235373 intron SKIP + chr3R 22236059 intron SKIP + chr3R_14_22235001 chr3R_22235001 D17-c3 2718 chr3R 22239466 22239525 chr3R 22248551 22248598 roo 15 9077 8.0 0.0 4.0 3.0 9132 chr3R 22239466 intron SKIP + chr3R 22244032 intron SKIP + chr3R 22248598 intron SKIP + chr3R_15_22240001 chr3R_22240001 D17-c3 2719 chr3R 22252800 22252819 chr3R 22252930 22252949 8 130 12.0 0.0 6.0 1.1 149 chr3R 22252800 intron SKIP + chr3R 22252874 intron SKIP + chr3R 22252949 intron SKIP + chr3R_8_22250001 chr3R_22250001 D17-c3 2720 chr3R 22252820 22252844 chr3R 22252929 22252959 7 125 7.5 0.0 3.8 1.5 139 chr3R 22252820 intron SKIP + chr3R 22252890 intron SKIP + chr3R 22252959 intron SKIP + chr3R_7_22250001 chr3R_22250001 D17-c3 2721 chr3R 22252845 22252852 chr3R 22252928 22252957 15 102 5.0 0.0 2.5 4.3 112 chr3R 22252845 intron SKIP + chr3R 22252901 intron SKIP + chr3R 22252957 intron SKIP + chr3R_15_22250001 chr3R_22250001 D17-c3 2722 chr3R 22253823 22253881 chr3R 22253924 22253982 14 101 7.0 3.5 5.2 2.3 159 chr3R 22253823 intron SKIP + chr3R 22253902 intron SKIP + chr3R 22253982 intron SKIP + chr3R_14_22250001 chr3R_22250001 D17-c3 2723 chr3R 22286132 22286165 chr3R 22286229 22286267 13 101 4.5 9.0 6.8 1.7 135 chr3R 22286132 intron SKIP + chr3R 22286200 intron SKIP + chr3R 22286267 intron SKIP + chr3R_13_22285001 chr3R_22285001 D17-c3 2724 chr3R 22433064 22433099 chr3R 22433189 22433224 9 125 8.0 11.0 9.5 0.9 160 chr3R 22433064 intron CG13847 - chr3R 22433144 intron CG13847 - chr3R 22433224 intron CG13847 - chr3R_9_22430001 chr3R_22430001 D17-c3 2725 chr3R 22437766 22437816 chr3R 22437881 22437931 26 115 1.0 4.5 2.8 6.8 165 chr3R 22437766 intergenic not near genes chr3R 22437848 intergenic not near genes chr3R 22437931 intergenic not near genes chr3R_26_22435001 chr3R_22435001 D17-c3 2726 chr3R 22450525 22450575 chr3R 22453190 22453240 NOF 25 2664 6.5 12.5 9.5 2.4 2715 chr3R 22450525 intron CG34376 + chr3R 22451882 intron CG34376 + chr3R 22453240 intron CG34376 + chr3R_25_22450001 chr3R_22450001 D17-c3 2727 chr3R 22531053 22531106 chr3R 22531164 22531216 37 110 6.5 8.0 7.2 4.5 163 chr3R 22531053 intron CG33093 - chr3R 22531134 exon CG33093 - chr3R 22531216 exon CG33093 - chr3R_37_22530001 chr3R_22530001 D17-c3 2728 chr3R 22538419 22538469 chr3R 22538529 22538569 18 106 8.5 8.0 8.2 2.0 150 chr3R 22538419 intron CG5326 - chr3R 22538494 intron CG5326 - chr3R 22538569 intron CG5326 - chr3R_18_22535001 chr3R_22535001 D17-c3 2729 chr3R 22640676 22640732 chr3R 22640816 22640872 39 140 7.5 11.5 9.5 3.7 196 chr3R 22640676 intron wake + chr3R 22640774 intron wake + chr3R 22640872 intron wake + chr3R_39_22640001 chr3R_22640001 D17-c3 2730 chr3R 22657652 22657696 chr3R 22657755 22657799 9 103 4.5 7.5 6.0 1.3 147 chr3R 22657652 intron wake + chr3R 22657726 intron wake + chr3R 22657799 intron wake + chr3R_9_22655001 chr3R_22655001 D17-c3 2731 chr3R 22672278 22672332 chr3R 22672396 22672450 15 118 1.0 6.5 3.8 3.1 172 chr3R 22672278 intron wake + chr3R 22672364 intron wake + chr3R 22672450 intron wake + chr3R_15_22670001 chr3R_22670001 D17-c3 2732 chr3R 22769071 22769119 chr3R 22769173 22769221 13 100 6.0 2.5 4.2 2.5 150 chr3R 22769071 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769146 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769221 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R_13_22765001 chr3R_22765001 D17-c3 2733 chr3R 22846769 22846824 chr3R 22847015 22847044 19 244 4.5 8.0 6.2 2.6 275 chr3R 22846769 intergenic CG4704 - chr3R 22846906 intergenic not near genes chr3R 22847044 intergenic not near genes chr3R_19_22845001 chr3R_22845001 D17-c3 2734 chr3R 22880578 22880614 chr3R 22880680 22880716 18 100 9.5 19.0 14.2 1.2 138 chr3R 22880578 intergenic not near genes chr3R 22880647 intergenic not near genes chr3R 22880716 intergenic not near genes chr3R_18_22880001 chr3R_22880001 D17-c3 2735 chr3R 22880919 22880959 chr3R 22881075 22881122 15 163 2.0 6.0 4.0 3.0 203 chr3R 22880919 intergenic not near genes chr3R 22881020 intergenic not near genes chr3R 22881122 intergenic not near genes chr3R_15_22880001 chr3R_22880001 D17-c3 2736 chr3R 22881183 22881229 chr3R 22884914 22884958 Doc 7 3729 4.5 5.5 5.0 1.2 3775 chr3R 22881183 intergenic not near genes chr3R 22883070 intergenic not near genes chr3R 22884958 intergenic not near genes chr3R_7_22880001 chr3R_22880001 D17-c3 2737 chr3R 22888990 22889046 chr3R 22889092 22889148 24 102 9.5 6.0 7.8 2.7 158 chr3R 22888990 intergenic not near genes chr3R 22889069 intergenic not near genes chr3R 22889148 intergenic not near genes chr3R_24_22885001 chr3R_22885001 D17-c3 2738 chr3R 22917965 22917981 chr3R 22918096 22918112 8 131 9.0 20.0 14.5 0.5 147 chr3R 22917965 intron klg + chr3R 22918038 intron klg + chr3R 22918112 intron klg + chr3R_8_22915001 chr3R_22915001 D17-c3 2739 chr3R 22974261 22974310 chr3R 22974369 22974419 23 109 0.0 5.5 2.8 6.1 158 chr3R 22974261 intergenic not near genes chr3R 22974340 intergenic not near genes chr3R 22974419 intergenic not near genes chr3R_23_22970001 chr3R_22970001 D17-c3 2740 chr3R 23064149 23064195 chr3R 23064283 23064329 17 133 35.5 30.0 32.8 0.5 180 chr3R 23064149 exon CG17111 - chr3R 23064239 intron CG17111 - chr3R 23064329 exon CG17111 - chr3R_17_23060001 chr3R_23060001 D17-c3 2741 chr3R 23064872 23064902 chr3R 23064988 23065018 9 115 12.5 20.5 16.5 0.5 146 chr3R 23064872 intron CG17111 - chr3R 23064945 intron CG17111 - chr3R 23065018 intron CG17111 - chr3R_9_23060001 chr3R_23060001 D17-c3 2742 chr3R 23070635 23070641 chr3R 23070740 23070746 4 105 8.0 0.0 4.0 0.8 111 chr3R 23070635 3` UTR CG13830 - chr3R 23070690 3` UTR CG13830 - chr3R 23070746 3` UTR CG13830 - chr3R_4_23070001 chr3R_23070001 D17-c3 2743 chr3R 23083737 23083785 chr3R 23083864 23083918 13 126 27.5 33.0 30.2 0.4 181 chr3R 23083737 intron CG13830 - chr3R 23083828 intron CG13830 - chr3R 23083918 intron CG13830 - chr3R_13_23080001 chr3R_23080001 D17-c3 2744 chr3R 23100129 23100427 chr3R 23100241 23100503 31 108 21.0 12.5 16.8 1.7 374 chr3R 23100129 intron,exon CG13830 -,CG6738 + chr3R 23100316 intron,exon CG13830 -,CG6738 + chr3R 23100503 intron,exon CG13830 -,CG6738 + chr3R_31_23100001 chr3R_23100001 D17-c3 2745 chr3R 23197938 23197978 chr3R 23198042 23198062 4 93 5.0 7.5 6.2 0.6 124 chr3R 23197938 exon cnc - chr3R 23198000 intron cnc - chr3R 23198062 intron cnc - chr3R_4_23195001 chr3R_23195001 D17-c3 2746 chr3R 23346832 23346869 chr3R 23346935 23346972 5 103 3.0 5.0 4.0 1.0 140 chr3R 23346832 intergenic not near genes chr3R 23346902 intergenic not near genes chr3R 23346972 intergenic not near genes chr3R_5_23345001 chr3R_23345001 D17-c3 2747 chr3R 23390941 23390946 chr3R 23391048 23391053 4 107 9.0 0.0 4.5 0.7 112 chr3R 23390941 intergenic CR43387 + chr3R 23390997 intergenic CR43387 + chr3R 23391053 intergenic CR43387 + chr3R_4_23390001 chr3R_23390001 D17-c3 2748 chr3R 23452951 23452995 chr3R 23453056 23453100 29 105 7.5 4.5 6.0 4.1 149 chr3R 23452951 intron CG4374 - chr3R 23453026 intron CG4374 - chr3R 23453100 intron CG4374 - chr3R_29_23450001 chr3R_23450001 D17-c3 2749 chr3R 23558373 23558427 chr3R 23560179 23560233 Bari1 29 1806 3.0 4.5 3.8 6.0 1860 chr3R 23558373 intron beat-IV + chr3R 23559303 intron beat-IV + chr3R 23560233 intron beat-IV + chr3R_29_23555001 chr3R_23555001 D17-c3 2750 chr3R 23564417 23564475 chr3R 23564586 23564644 19 169 7.0 8.0 7.5 2.2 227 chr3R 23564417 intron beat-IV + chr3R 23564530 intron beat-IV + chr3R 23564644 intron beat-IV + chr3R_19_23560001 chr3R_23560001 D17-c3 2751 chr3R 23835385 23835434 chr3R 23844559 23844607 roo 9 9174 4.5 0.0 2.2 2.8 9222 chr3R 23835385 intron CG34355 + chr3R 23839996 intron CG34355 + chr3R 23844607 intron CG34355 + chr3R_9_23835001 chr3R_23835001 D17-c3 2752 chr3R 23851066 23851088 chr3R 23858758 23858780 opus 6 7692 3.5 8.5 6.0 0.9 7714 chr3R 23851066 3` UTR CG34355 + chr3R 23854923 intergenic not near genes chr3R 23858780 intergenic not near genes chr3R_6_23850001 chr3R_23850001 D17-c3 2753 chr3R 23873965 23873970 chr3R 23874066 23874075 6 100 19.0 27.0 23.0 0.2 110 chr3R 23873965 intron Pli - chr3R 23874020 intron Pli - chr3R 23874075 intron Pli - chr3R_6_23870001 chr3R_23870001 D17-c3 2754 chr3R 23944878 23944929 chr3R 23944988 23945039 35 110 7.5 4.5 6.0 5.0 161 chr3R 23944878 intron CG12268 - chr3R 23944958 intron CG12268 - chr3R 23945039 exon CG12268 - chr3R_35_23940001 chr3R_23940001 D17-c3 2755 chr3R 23949015 23949062 chr3R 23949117 23949164 22 101 5.0 4.0 4.5 4.0 149 chr3R 23949015 intergenic not near genes chr3R 23949090 intergenic not near genes chr3R 23949164 intergenic not near genes chr3R_22_23945001 chr3R_23945001 D17-c3 2756 chr3R 24020797 24020827 chr3R 24021306 24021340 8 513 7.5 2.5 5.0 1.3 543 chr3R 24020797 intron KrT95D - chr3R 24021068 intron KrT95D - chr3R 24021340 intron KrT95D - chr3R_8_24020001 chr3R_24020001 D17-c3 2757 chr3R 24041974 24042122 chr3R 24042112 24042300 25 143 19.0 8.5 13.8 1.7 326 chr3R 24041974 3` UTR spas + chr3R 24042137 3` UTR spas + chr3R 24042300 3` UTR spas + chr3R_25_24040001 chr3R_24040001 D17-c3 2758 chr3R 24072062 24072122 chr3R 24072525 24072583 jockey 15 459 10.0 0.0 5.0 2.5 521 chr3R 24072062 intron 4EHP - chr3R 24072322 intron 4EHP - chr3R 24072583 intron 4EHP - chr3R_15_24070001 chr3R_24070001 D17-c3 2759 chr3R 24076894 24076915 chr3R 24078386 24078407 hobo 7 1491 16.5 12.5 14.5 0.5 1513 chr3R 24076894 intron 4EHP - chr3R 24077650 intron 4EHP - chr3R 24078407 intron 4EHP - chr3R_7_24075001 chr3R_24075001 D17-c3 2760 chr3R 24076918 24076944 chr3R 24078381 24078401 hobo 12 1483 8.0 11.0 9.5 1.1 1483 chr3R 24076918 intron 4EHP - chr3R 24077660 intron 4EHP - chr3R 24078401 intron 4EHP - chr3R_12_24075001 chr3R_24075001 D17-c3 2761 chr3R 24096526 24096537 chr3R 24097083 24097094 6 557 11.5 5.0 8.2 0.7 568 chr3R 24096526 intron 4EHP - chr3R 24096810 intron 4EHP - chr3R 24097094 intron 4EHP - chr3R_6_24095001 chr3R_24095001 D17-c3 2762 chr3R 24096539 24096580 chr3R 24097079 24097136 5 553 3.0 5.0 4.0 1.0 597 chr3R 24096539 intron 4EHP - chr3R 24096838 intron 4EHP - chr3R 24097136 intron 4EHP - chr3R_5_24095001 chr3R_24095001 D17-c3 2763 chr3R 24199713 24199771 chr3R 24199818 24199868 23 104 5.5 6.5 6.0 3.3 155 chr3R 24199713 intron twin - chr3R 24199790 intron twin - chr3R 24199868 intron twin - chr3R_23_24195001 chr3R_24195001 D17-c3 2764 chr3R 24205770 24205813 chr3R 24206283 24206336 19 522 4.0 8.5 6.2 2.6 566 chr3R 24205770 intron twin - chr3R 24206053 intron twin - chr3R 24206336 intron twin - chr3R_19_24205001 chr3R_24205001 D17-c3 2765 chr3R 24207197 24207244 chr3R 24212298 24212345 flea 33 5101 10.0 10.5 10.2 2.9 5148 chr3R 24207197 intron twin - chr3R 24209771 intron twin - chr3R 24212345 intron twin - chr3R_33_24205001 chr3R_24205001 D17-c3 2766 chr3R 21907534 21907535 chr3R 24389465 24389465 17 2481930 33.5 28.0 30.8 0.5 2481931 chr3R 21907534 intergenic CG6678 + chr3R 23148500 intergenic not near genes chr3R 24389465 intron CG5768 - chr3R_17_23145001 chr3R_23145001 D17-c3 2767 chr3R 24527780 24527834 chr3R 24527896 24527950 10 116 2.0 1.5 1.8 3.6 170 chr3R 24527780 intergenic CG13618 +,CG6607 + chr3R 24527865 intergenic CG6607 +,CG13618 + chr3R 24527950 intergenic CG6607 +,CG13618 + chr3R_10_24525001 chr3R_24525001 D17-c3 2768 chr3R 24594652 24594665 chr3R 24594917 24594930 pogo 7 264 5.0 11.0 8.0 0.8 278 chr3R 24594652 intron mld + chr3R 24594791 intron mld + chr3R 24594930 intron mld + chr3R_7_24590001 chr3R_24590001 D17-c3 2769 chr3R 24605546 24605557 chr3R 24605659 24605670 5 113 13.0 25.0 19.0 0.2 124 chr3R 24605546 intron mld + chr3R 24605608 intron mld + chr3R 24605670 intron mld + chr3R_5_24605001 chr3R_24605001 D17-c3 2770 chr3R 24624364 24624382 chr3R 24624478 24624496 11 114 4.5 12.5 8.5 1.2 132 chr3R 24624364 intron Syx18 - chr3R 24624430 intron Syx18 - chr3R 24624496 exon Syx18 - chr3R_11_24620001 chr3R_24620001 D17-c3 2771 chr3R 24667580 24667613 chr3R 24667682 24667715 11 102 7.5 0.5 4.0 2.2 135 chr3R 24667580 intron slo + chr3R 24667648 intron slo + chr3R 24667715 intron slo + chr3R_11_24665001 chr3R_24665001 D17-c3 2772 chr3R 24670142 24670198 chr3R 24670251 24670307 19 109 3.5 5.5 4.5 3.5 165 chr3R 24670142 intron slo + chr3R 24670224 intron slo + chr3R 24670307 intron slo + chr3R_19_24670001 chr3R_24670001 D17-c3 2773 chr3R 24671194 24671253 chr3R 24671296 24671355 17 102 9.5 7.0 8.2 1.8 161 chr3R 24671194 intron slo + chr3R 24671274 intron slo + chr3R 24671355 intron slo + chr3R_17_24670001 chr3R_24670001 D17-c3 2774 chr3R 24725533 24725583 chr3R 24725646 24725697 21 111 11.5 4.0 7.8 2.4 164 chr3R 24725533 intron tok + chr3R 24725615 intron tok + chr3R 24725697 intron tok + chr3R_21_24725001 chr3R_24725001 D17-c3 2775 chr3R 24743007 24743062 chr3R 24743117 24743172 21 110 8.5 10.0 9.2 2.1 165 chr3R 24743007 intron tok + chr3R 24743090 intron tok + chr3R 24743172 exon tok + chr3R_21_24740001 chr3R_24740001 D17-c3 2776 chr3R 24787387 24787556 chr3R 24787547 24787657 4 127 3.5 5.0 4.2 0.8 270 chr3R 24787387 5` UTR CG5805 - chr3R 24787522 intergenic CG5805 - chr3R 24787657 intergenic CG5805 -,Ets96B + chr3R_4_24785001 chr3R_24785001 D17-c3 2777 chr3R 24888076 24888133 chr3R 24888258 24888315 44 181 16.5 9.5 13.0 3.1 239 chr3R 24888076 intron CG31121 - chr3R 24888196 intron CG31121 - chr3R 24888315 intron CG31121 - chr3R_44_24885001 chr3R_24885001 D17-c3 2778 chr3R 24888766 24888812 chr3R 24888931 24888977 6 165 6.5 2.5 4.5 1.1 211 chr3R 24888766 intron CG31121 - chr3R 24888872 intron CG31121 - chr3R 24888977 intron CG31121 - chr3R_6_24885001 chr3R_24885001 D17-c3 2779 chr3R 24893444 24893478 chr3R 24893549 24893583 8 105 6.0 2.0 4.0 1.6 139 chr3R 24893444 intron CG31121 - chr3R 24893514 intron CG31121 - chr3R 24893583 intron CG31121 - chr3R_8_24890001 chr3R_24890001 D17-c3 2780 chr3R 24927106 24927114 chr3R 24931922 24931930 Doc 9 4815 14.0 11.0 12.5 0.7 4824 chr3R 24927106 intergenic Trf4-2 + chr3R 24929518 intergenic not near genes chr3R 24931930 intergenic CG11771 + chr3R_9_24925001 chr3R_24925001 D17-c3 2781 chr3R 24927117 24927151 chr3R 24931919 24931967 Doc 25 4812 6.5 11.0 8.8 2.6 4850 chr3R 24927117 intergenic Trf4-2 + chr3R 24929542 intergenic not near genes chr3R 24931967 intergenic CG11771 + chr3R_25_24925001 chr3R_24925001 D17-c3 2782 chr3R 24973932 24973980 chr3R 24974033 24974081 28 100 8.5 10.5 9.5 2.7 149 chr3R 24973932 intergenic not near genes chr3R 24974006 intergenic not near genes chr3R 24974081 intergenic not near genes chr3R_28_24970001 chr3R_24970001 D17-c3 2783 chr3R 24974890 24974931 chr3R 24974994 24975035 27 104 9.5 10.0 9.8 2.5 145 chr3R 24974890 intergenic not near genes chr3R 24974962 intergenic not near genes chr3R 24975035 intergenic not near genes chr3R_27_24970001 chr3R_24970001 D17-c3 2784 chr3R 25004874 25004920 chr3R 25004982 25005028 16 108 11.0 7.5 9.2 1.6 154 chr3R 25004874 intron tnc + chr3R 25004951 intron tnc + chr3R 25005028 intron tnc + chr3R_16_25000001 chr3R_25000001 D17-c3 2785 chr3R 25018235 25018245 chr3R 25018337 25018347 5 102 16.5 15.0 15.8 0.3 112 chr3R 25018235 exon tnc + chr3R 25018291 exon tnc + chr3R 25018347 exon tnc + chr3R_5_25015001 chr3R_25015001 D17-c3 2786 chr3R 25018249 25018289 chr3R 25018335 25018377 17 89 10.0 14.0 12.0 1.3 128 chr3R 25018249 exon tnc + chr3R 25018313 exon tnc + chr3R 25018377 exon tnc + chr3R_17_25015001 chr3R_25015001 D17-c3 2787 chr3R 25053098 25053160 chr3R 25053222 25053263 9 116 3.0 16.0 9.5 0.9 165 chr3R 25053098 intergenic CG11791 +,CG31109 - chr3R 25053180 intergenic CG11791 +,CG31109 - chr3R 25053263 intergenic CG31109 -,CG11791 + chr3R_9_25050001 chr3R_25050001 D17-c3 2788 chr3R 25136374 25136419 chr3R 25136479 25136524 11 105 5.0 3.0 4.0 2.2 150 chr3R 25136374 3` UTR Bili + chr3R 25136449 3` UTR Bili + chr3R 25136524 3` UTR Bili + chr3R_11_25135001 chr3R_25135001 D17-c3 2789 chr3R 25209574 25209629 chr3R 25209681 25209736 23 104 2.0 9.0 5.5 3.5 162 chr3R 25209574 intron CG13654 + chr3R 25209655 intron CG13654 + chr3R 25209736 intron CG13654 + chr3R_23_25205001 chr3R_25205001 D17-c3 2790 chr3R 25235796 25235844 chr3R 25235901 25235949 7 105 1.0 3.0 2.0 2.3 153 chr3R 25235796 intergenic CG10420 - chr3R 25235872 intergenic CG10420 - chr3R 25235949 intergenic CG10420 - chr3R_7_25235001 chr3R_25235001 D17-c3 2791 chr3R 25368448 25368482 chr3R 25368591 25368625 14 142 5.0 0.5 2.8 3.7 177 chr3R 25368448 intron Fur1 - chr3R 25368536 intron Fur1 - chr3R 25368625 intron Fur1 - chr3R_14_25365001 chr3R_25365001 D17-c3 2792 chr3R 25422041 25422098 chr3R 25422147 25422222 15 108 3.0 0.0 1.5 6.0 181 chr3R 25422041 intron Fur1 - chr3R 25422132 intron Fur1 - chr3R 25422222 intron Fur1 - chr3R_15_25420001 chr3R_25420001 D17-c3 2793 chr3R 25431406 25431444 chr3R 25431516 25431555 8 110 4.5 1.5 3.0 2.0 149 chr3R 25431406 intron Fur1 - chr3R 25431480 intron Fur1 - chr3R 25431555 intron Fur1 - chr3R_8_25430001 chr3R_25430001 D17-c3 2794 chr3R 25436994 25437043 chr3R 25437103 25437152 17 109 10.0 9.5 9.8 1.6 158 chr3R 25436994 intron Fur1 - chr3R 25437073 intron Fur1 - chr3R 25437152 intron Fur1 - chr3R_17_25435001 chr3R_25435001 D17-c3 2795 chr3R 25528017 25528043 chr3R 25528145 25528171 6 126 16.0 13.5 14.8 0.4 154 chr3R 25528017 intron msi + chr3R 25528094 intron msi + chr3R 25528171 intron msi + chr3R_6_25525001 chr3R_25525001 D17-c3 2796 chr3R 25567812 25567856 chr3R 25567930 25567974 11 118 5.5 7.0 6.2 1.5 162 chr3R 25567812 intron msi + chr3R 25567893 intron msi + chr3R 25567974 intron msi + chr3R_11_25565001 chr3R_25565001 D17-c3 2797 chr3R 25575066 25575121 chr3R 25575309 25575364 18 243 4.5 5.5 5.0 3.0 298 chr3R 25575066 intron msi + chr3R 25575215 intron msi + chr3R 25575364 intron msi + chr3R_18_25575001 chr3R_25575001 D17-c3 2798 chr3R 25689108 25689160 chr3R 25689241 25689293 23 132 4.5 7.5 6.0 3.3 185 chr3R 25689108 intergenic not near genes chr3R 25689200 intergenic not near genes chr3R 25689293 intergenic not near genes chr3R_23_25685001 chr3R_25685001 D17-c3 2799 chr3R 25720782 25720834 chr3R 25720899 25720944 12 113 0.5 9.5 5.0 2.0 162 chr3R 25720782 intron LpR2 - chr3R 25720863 intron LpR2 - chr3R 25720944 intron LpR2 - chr3R_12_25720001 chr3R_25720001 D17-c3 2800 chr3R 25725806 25725861 chr3R 25734991 25735041 roo 14 9185 6.0 8.0 7.0 1.8 9235 chr3R 25725806 intron LpR2 - chr3R 25730424 intron LpR2 - chr3R 25735041 intron LpR2 - chr3R_14_25730001 chr3R_25730001 D17-c3 2801 chr3R 25765859 25765909 chr3R 25765962 25766008 27 96 11.5 13.0 12.2 2.0 149 chr3R 25765859 intergenic not near genes chr3R 25765934 intergenic not near genes chr3R 25766008 intergenic not near genes chr3R_27_25765001 chr3R_25765001 D17-c3 2802 chr3R 26108802 26108818 chr3R 26117410 26117426 Tirant 8 8607 15.5 0.0 7.8 0.9 8624 chr3R 26108802 5` UTR CG31324 + chr3R 26113114 intron CG31324 + chr3R 26117426 intron CG31324 + chr3R_8_26110001 chr3R_26110001 D17-c3 2803 chr3R 26183317 26183338 chr3R 26183412 26183421 10 97 7.0 7.0 7.0 1.2 104 chr3R 26183317 intron CG31323 + chr3R 26183369 intron CG31323 + chr3R 26183421 intron CG31323 + chr3R_10_26180001 chr3R_26180001 D17-c3 2804 chr3R 26241225 26241279 chr3R 26241339 26241395 12 114 6.5 3.5 5.0 2.0 170 chr3R 26241225 intron CR42745 + chr3R 26241310 intron CR42745 + chr3R 26241395 intron CR42745 + chr3R_12_26240001 chr3R_26240001 D17-c3 2805 chr3R 26292083 26292139 chr3R 26292188 26292244 16 105 4.0 6.0 5.0 2.7 161 chr3R 26292083 intergenic not near genes chr3R 26292164 intergenic not near genes chr3R 26292244 intergenic not near genes chr3R_16_26290001 chr3R_26290001 D17-c3 2806 chr3R 26294694 26294749 chr3R 26294797 26294852 13 103 4.0 4.5 4.2 2.5 158 chr3R 26294694 intergenic not near genes chr3R 26294773 intergenic not near genes chr3R 26294852 intergenic not near genes chr3R_13_26290001 chr3R_26290001 D17-c3 2807 chr3R 26325376 26325397 chr3R 26325495 26325516 9 119 3.5 9.0 6.2 1.2 140 chr3R 26325376 intron CG33970 + chr3R 26325446 intron CG33970 + chr3R 26325516 intron CG33970 + chr3R_9_26325001 chr3R_26325001 D17-c3 2808 chr3R 26365096 26365132 chr3R 26365202 26365241 7 109 5.5 5.5 5.5 1.1 145 chr3R 26365096 intergenic not near genes chr3R 26365168 intergenic not near genes chr3R 26365241 intergenic not near genes chr3R_7_26365001 chr3R_26365001 D17-c3 2809 chr3R 26376300 26376341 chr3R 26385485 26385526 roo 22 9185 14.0 0.0 7.0 2.8 9226 chr3R 26376300 intergenic not near genes chr3R 26380913 intergenic not near genes chr3R 26385526 intergenic not near genes chr3R_22_26380001 chr3R_26380001 D17-c3 2810 chr3R 26523370 26523399 chr3R 26523476 26523507 4 108 5.5 2.0 3.8 0.8 137 chr3R 26523370 intron plum - chr3R 26523438 intron plum - chr3R 26523507 intron plum - chr3R_4_26520001 chr3R_26520001 D17-c3 2811 chr3R 26529320 26529375 chr3R 26529428 26529483 25 108 5.5 0.0 2.8 6.6 163 chr3R 26529320 intron plum - chr3R 26529402 intron plum - chr3R 26529483 intron plum - chr3R_25_26525001 chr3R_26525001 D17-c3 2812 chr3R 26545385 26545424 chr3R 26545533 26545577 24 153 8.0 8.5 8.2 2.6 192 chr3R 26545385 intron scrib + chr3R 26545481 intron scrib + chr3R 26545577 intron scrib + chr3R_24_26545001 chr3R_26545001 D17-c3 2813 chr3R 26558299 26558360 chr3R 26565637 26565676 Stalker4 43 7334 6.0 5.5 5.8 6.3 7377 chr3R 26558299 intron scrib + chr3R 26561988 intron scrib + chr3R 26565676 intron scrib + chr3R_43_26560001 chr3R_26560001 D17-c3 2814 chr3R 26641614 26641661 chr3R 26641726 26641773 24 111 7.0 9.5 8.2 2.6 159 chr3R 26641614 intergenic not near genes chr3R 26641694 intergenic not near genes chr3R 26641773 intergenic not near genes chr3R_24_26640001 chr3R_26640001 D17-c3 2815 chr3R 26642715 26642757 chr3R 26643133 26643176 jockey 18 418 7.5 5.0 6.2 2.5 461 chr3R 26642715 intergenic not near genes chr3R 26642946 intergenic not near genes chr3R 26643176 intergenic not near genes chr3R_18_26640001 chr3R_26640001 D17-c3 2816 chr3R 21907534 21907535 chr3R 26659334 26659337 4 4751802 33.5 46.0 39.8 0.1 4751803 chr3R 21907534 intergenic CG6678 + chr3R 24283436 intergenic CR45662 - chr3R 26659337 intron beat-VII - chr3R_4_24280001 chr3R_24280001 D17-c3 2817 chr3R 26752160 26752165 chr3R 26752268 26752273 4 108 26.5 14.5 20.5 0.2 113 chr3R 26752160 intergenic not near genes chr3R 26752216 intergenic not near genes chr3R 26752273 intergenic not near genes chr3R_4_26750001 chr3R_26750001 D17-c3 2818 chr3R 26752167 26752213 chr3R 26752267 26752321 33 104 13.5 14.5 14.0 2.2 154 chr3R 26752167 intergenic not near genes chr3R 26752244 intergenic not near genes chr3R 26752321 intergenic not near genes chr3R_33_26750001 chr3R_26750001 D17-c3 2819 chr3R 26770218 26770257 chr3R 26770320 26770359 9 101 4.0 7.5 5.8 1.3 141 chr3R 26770218 intergenic CR45563 + chr3R 26770288 intergenic CR45563 + chr3R 26770359 intergenic not near genes chr3R_9_26770001 chr3R_26770001 D17-c3 2820 chr3R 26810530 26810578 chr3R 26811040 26811088 roo 18 510 5.0 8.0 6.5 2.4 558 chr3R 26810530 intron Tl + chr3R 26810809 intron Tl + chr3R 26811088 intron Tl + chr3R_18_26810001 chr3R_26810001 D17-c3 2821 chr3R 22081601 22081601 chr3R 26855367 26855367 6 4773766 3.0 14.5 8.8 0.6 4773766 chr3R 22081601 intron CG13408 + chr3R 24468484 intergenic not near genes chr3R 26855367 intron Lerp - chr3R_6_24465001 chr3R_24465001 D17-c3 2822 chr3R 26961784 26961832 chr3R 26961893 26961941 19 108 9.5 11.0 10.2 1.7 157 chr3R 26961784 3` UTR Tsp97E - chr3R 26961862 3` UTR Tsp97E - chr3R 26961941 3` UTR Tsp97E - chr3R_19_26960001 chr3R_26960001 D17-c3 2823 chr3R 26983790 26983812 chr3R 26983897 26983920 11 108 5.0 3.5 4.2 2.1 130 chr3R 26983790 intron CG14253 + chr3R 26983855 intron CG14253 + chr3R 26983920 intron CG14253 + chr3R_11_26980001 chr3R_26980001 D17-c3 2824 chr3R 27005022 27005077 chr3R 27005176 27005231 26 154 12.5 11.0 11.8 2.0 209 chr3R 27005022 intron,exon RYa-R +,CG6296 - chr3R 27005126 intron,exon RYa-R +,CG6296 - chr3R 27005231 intron,exon RYa-R +,CG6296 - chr3R_26_27005001 chr3R_27005001 D17-c3 2825 chr3R 27007381 27007428 chr3R 27016541 27016588 roo 17 9157 4.0 5.5 4.8 2.9 9207 chr3R 27007381 intron RYa-R + chr3R 27011984 intron RYa-R + chr3R 27016588 intron RYa-R + chr3R_17_27010001 chr3R_27010001 D17-c3 2826 chr3R 27027656 27027720 chr3R 27027765 27027810 10 104 1.5 3.5 2.5 2.9 154 chr3R 27027656 intron RYa-R + chr3R 27027733 intron RYa-R + chr3R 27027810 intron RYa-R + chr3R_10_27025001 chr3R_27025001 D17-c3 2827 chr3R 27028707 27028746 chr3R 27028806 27028850 14 103 4.5 4.5 4.5 2.5 143 chr3R 27028707 intron RYa-R + chr3R 27028778 intron RYa-R + chr3R 27028850 intron RYa-R + chr3R_14_27025001 chr3R_27025001 D17-c3 2828 chr3R 27101529 27101556 chr3R 27101660 27101687 20 131 7.0 13.0 10.0 1.8 158 chr3R 27101529 exon CG17189 + chr3R 27101608 intron CG17189 + chr3R 27101687 exon CG17189 + chr3R_20_27100001 chr3R_27100001 D17-c3 2829 chr3R 27140490 27140545 chr3R 27148125 27148180 412 21 7635 6.0 8.0 7.0 2.6 7690 chr3R 27140490 intron CG6051 - chr3R 27144335 intron CG6051 - chr3R 27148180 intron CG6051 - chr3R_21_27140001 chr3R_27140001 D17-c3 2830 chr3R 27292256 27292302 chr3R 27292389 27292439 29 135 15.0 10.5 12.8 2.1 183 chr3R 27292256 intergenic CG3348 - chr3R 27292348 intergenic CG3348 - chr3R 27292439 intergenic CG3348 - chr3R_29_27290001 chr3R_27290001 D17-c3 2831 chr3R 27327400 27327458 chr3R 27327504 27327537 29 98 5.5 7.5 6.5 3.9 137 chr3R 27327400 intergenic not near genes chr3R 27327468 intergenic not near genes chr3R 27327537 intergenic not near genes chr3R_29_27325001 chr3R_27325001 D17-c3 2832 chr3R 27335923 27335961 chr3R 27336029 27336067 20 106 8.0 0.0 4.0 4.0 144 chr3R 27335923 intergenic not near genes chr3R 27335995 intergenic not near genes chr3R 27336067 intergenic not near genes chr3R_20_27335001 chr3R_27335001 D17-c3 2833 chr3R 27342772 27342824 chr3R 27351378 27351423 Tirant 29 8605 6.0 10.0 8.0 3.2 8651 chr3R 27342772 intron CG42534 + chr3R 27347098 intron CG42534 + chr3R 27351423 intron CG42534 + chr3R_29_27345001 chr3R_27345001 D17-c3 2834 chr3R 27451618 27451670 chr3R 27451907 27451959 18 288 8.5 21.5 15.0 1.1 341 chr3R 27451618 intergenic not near genes chr3R 27451788 intergenic not near genes chr3R 27451959 intergenic not near genes chr3R_18_27450001 chr3R_27450001 D17-c3 2835 chr3R 27496567 27496603 chr3R 27496697 27496733 16 125 8.5 9.0 8.8 1.6 166 chr3R 27496567 intergenic not near genes chr3R 27496650 intergenic not near genes chr3R 27496733 intergenic not near genes chr3R_16_27495001 chr3R_27495001 D17-c3 2836 chr3R 27506278 27506318 chr3R 27506385 27506425 6 107 4.5 10.0 7.2 0.7 147 chr3R 27506278 intergenic not near genes chr3R 27506352 intergenic not near genes chr3R 27506425 intergenic not near genes chr3R_6_27505001 chr3R_27505001 D17-c3 2837 chr3R 27521159 27521180 chr3R 27530393 27530414 roo 12 9234 7.0 6.0 6.5 1.6 9255 chr3R 27521159 intron CG12885 + chr3R 27525786 intron CG12885 + chr3R 27530414 intron CG12885 + chr3R_12_27525001 chr3R_27525001 D17-c3 2838 chr3R 27679913 27679968 chr3R 27680061 27680116 29 145 7.5 9.0 8.2 3.2 203 chr3R 27679913 exon CG12883 + chr3R 27680014 3` UTR CG12883 + chr3R 27680116 3` UTR CG12883 + chr3R_29_27680001 chr3R_27680001 D17-c3 2839 chr3R 27685742 27685787 chr3R 27685846 27685885 8 100 6.0 9.0 7.5 0.9 143 chr3R 27685742 3` UTR CG31055 - chr3R 27685814 3` UTR CG31055 - chr3R 27685885 3` UTR CG31055 - chr3R_8_27685001 chr3R_27685001 D17-c3 2840 chr3R 27685788 27685794 chr3R 27685842 27685867 7 86 5.0 9.0 7.0 0.9 79 chr3R 27685788 3` UTR CG31055 - chr3R 27685828 3` UTR CG31055 - chr3R 27685867 3` UTR CG31055 - chr3R_7_27685001 chr3R_27685001 D17-c3 2841 chr3R 27706753 27706799 chr3R 27706855 27706901 23 102 10.5 3.5 7.0 2.9 148 chr3R 27706753 intergenic CG12428 -,CG12877 + chr3R 27706827 intergenic CG12428 -,CG12877 + chr3R 27706901 intergenic CG12428 -,CG12877 + chr3R_23_27705001 chr3R_27705001 D17-c3 2842 chr3R 27718551 27718595 chr3R 27718655 27718699 24 103 8.0 8.5 8.2 2.6 148 chr3R 27718551 intergenic not near genes chr3R 27718625 intergenic not near genes chr3R 27718699 intergenic not near genes chr3R_24_27715001 chr3R_27715001 D17-c3 2843 chr3R 27725545 27725588 chr3R 27731012 27731055 I-element 21 5466 6.5 9.0 7.8 2.4 5510 chr3R 27725545 intergenic not near genes chr3R 27728300 intergenic not near genes chr3R 27731055 intergenic not near genes chr3R_21_27725001 chr3R_27725001 D17-c3 2844 chr3R 27779243 27779286 chr3R 27779348 27779391 29 102 15.5 15.0 15.2 1.8 148 chr3R 27779243 exon CG34353 - chr3R 27779317 intron CG34353 - chr3R 27779391 intron CG34353 - chr3R_29_27775001 chr3R_27775001 D17-c3 2845 chr3R 27789060 27789111 chr3R 27789162 27789202 22 101 8.0 8.5 8.2 2.4 142 chr3R 27789060 exon CG34353 - chr3R 27789131 intron CG34353 - chr3R 27789202 intron CG34353 - chr3R_22_27785001 chr3R_27785001 D17-c3 2846 chr3R 27791642 27791647 chr3R 27794793 27794814 Rt1c 5 3162 19.5 13.5 16.5 0.3 3172 chr3R 27791642 intron CG34353 - chr3R 27793228 intron CG34353 - chr3R 27794814 intron CG34353 - chr3R_5_27790001 chr3R_27790001 D17-c3 2847 chr3R 27856740 27856789 chr3R 27858248 27858297 hopper2 21 1507 6.5 5.0 5.8 3.1 1557 chr3R 27856740 intron CG34353 - chr3R 27857518 intron CG34353 - chr3R 27858297 intron CG34353 - chr3R_21_27855001 chr3R_27855001 D17-c3 2848 chr3R 27862938 27862980 chr3R 27868263 27868310 Transpac 13 5325 6.0 6.5 6.2 1.8 5372 chr3R 27862938 intron CG34353 - chr3R 27865624 intron CG34353 - chr3R 27868310 intron CG34353 - chr3R_13_27865001 chr3R_27865001 D17-c3 2849 chr3R 27875680 27875726 chr3R 27882759 27882806 297 22 7080 4.5 12.0 8.2 2.4 7126 chr3R 27875680 intron CG34353 - chr3R 27879243 intron CG34353 - chr3R 27882806 intron CG34353 - chr3R_22_27875001 chr3R_27875001 D17-c3 2850 chr3R 27941647 27941686 chr3R 27941769 27941809 30 122 9.0 11.0 10.0 2.7 162 chr3R 27941647 exon CG5514 + chr3R 27941728 exon CG5514 + chr3R 27941809 exon CG5514 + chr3R_30_27940001 chr3R_27940001 D17-c3 2851 chr3R 27970814 27970825 chr3R 27970928 27970934 4 113 10.5 1.5 6.0 0.6 120 chr3R 27970814 intron betaTub97EF - chr3R 27970874 intron betaTub97EF - chr3R 27970934 intron betaTub97EF - chr3R_4_27970001 chr3R_27970001 D17-c3 2852 chr3R 27973829 27973882 chr3R 27973935 27973988 38 105 7.5 11.0 9.2 3.7 159 chr3R 27973829 intron betaTub97EF - chr3R 27973908 intron betaTub97EF - chr3R 27973988 intron betaTub97EF - chr3R_38_27970001 chr3R_27970001 D17-c3 2853 chr3R 28068474 28068482 chr3R 28073940 28073949 I-element 4 5467 0.0 6.5 3.2 1.0 5475 chr3R 28068474 intron CG34362 + chr3R 28071212 intron CG34362 + chr3R 28073949 intron CG34362 + chr3R_4_28070001 chr3R_28070001 D17-c3 2854 chr3R 28068483 28068523 chr3R 28073935 28073990 I-element 22 5466 0.0 6.0 3.0 5.5 5507 chr3R 28068483 intron CG34362 + chr3R 28071236 intron CG34362 + chr3R 28073990 intron CG34362 + chr3R_22_28070001 chr3R_28070001 D17-c3 2855 chr3R 28173651 28173703 chr3R 28181106 28181158 mdg1 15 7455 3.5 5.5 4.5 2.7 7507 chr3R 28173651 intron CG34354 + chr3R 28177404 intron CG34354 + chr3R 28181158 intron CG34354 + chr3R_15_28175001 chr3R_28175001 D17-c3 2856 chr3R 28253316 28253368 chr3R 28255851 28255903 jockey 20 2532 5.5 2.5 4.0 4.0 2587 chr3R 28253316 intergenic not near genes chr3R 28254610 intergenic not near genes chr3R 28255903 intergenic not near genes chr3R_20_28250001 chr3R_28250001 D17-c3 2857 chr3R 28302081 28302129 chr3R 28302545 28302593 jockey 33 463 4.0 7.5 5.8 4.9 512 chr3R 28302081 intergenic not near genes chr3R 28302337 intergenic not near genes chr3R 28302593 intergenic not near genes chr3R_33_28300001 chr3R_28300001 D17-c3 2858 chr3R 28345622 28345674 chr3R 28345723 28345775 16 101 4.5 6.0 5.2 2.6 153 chr3R 28345622 intergenic Moca-cyp + chr3R 28345698 intergenic not near genes chr3R 28345775 intergenic not near genes chr3R_16_28345001 chr3R_28345001 D17-c3 2859 chr3R 28380776 28380826 chr3R 28381022 28381079 28 252 7.0 4.0 5.5 4.3 303 chr3R 28380776 intergenic not near genes chr3R 28380928 intergenic not near genes chr3R 28381079 intergenic not near genes chr3R_28_28380001 chr3R_28380001 D17-c3 2860 chr3R 28393678 28393943 chr3R 28393803 28394048 31 116 6.5 5.5 6.0 4.4 370 chr3R 28393678 intergenic not near genes chr3R 28393863 intergenic not near genes chr3R 28394048 intergenic not near genes chr3R_31_28390001 chr3R_28390001 D17-c3 2861 chr3R 28478393 28478448 chr3R 28478499 28478518 29 102 7.5 9.5 8.5 3.1 125 chr3R 28478393 intergenic not near genes chr3R 28478456 intergenic not near genes chr3R 28478518 intergenic not near genes chr3R_29_28475001 chr3R_28475001 D17-c3 2862 chr3R 28479143 28479167 chr3R 28479241 28479275 8 107 5.5 9.5 7.5 0.9 132 chr3R 28479143 intergenic not near genes chr3R 28479209 intergenic not near genes chr3R 28479275 intergenic not near genes chr3R_8_28475001 chr3R_28475001 D17-c3 2863 chr3R 28480298 28480331 chr3R 28480404 28480437 20 105 5.0 8.5 6.8 2.6 139 chr3R 28480298 intergenic not near genes chr3R 28480368 intergenic not near genes chr3R 28480437 intergenic not near genes chr3R_20_28480001 chr3R_28480001 D17-c3 2864 chr3R 28484353 28484400 chr3R 28486245 28486292 66 1893 62.5 98.5 80.5 0.8 1939 chr3R 28484353 intergenic CG1894 + chr3R 28485322 exon CG1894 + chr3R 28486292 intergenic CG1894 + chr3R_66_28485001 chr3R_28485001 D17-c3 2865 chr3R 28616451 28616500 chr3R 28616570 28616619 18 117 6.0 6.5 6.2 2.5 168 chr3R 28616451 intron CG10011 - chr3R 28616535 intron CG10011 - chr3R 28616619 intron CG10011 - chr3R_18_28615001 chr3R_28615001 D17-c3 2866 chr3R 28638895 28638951 chr3R 28640204 28640260 23 1309 26.0 28.0 27.0 0.8 1365 chr3R 28638895 intergenic CG9988 + chr3R 28639578 intergenic not near genes chr3R 28640260 intergenic not near genes chr3R_23_28635001 chr3R_28635001 D17-c3 2867 chr3R 28637821 28637835 chr3R 28640291 28640327 18 2464 69.0 35.5 52.2 0.3 2506 chr3R 28637821 exon CG9988 + chr3R 28639074 intergenic CG9988 + chr3R 28640327 intergenic not near genes chr3R_18_28635001 chr3R_28635001 D17-c3 2868 chr3R 28652231 28652283 chr3R 28652385 28652401 15 148 6.0 4.0 5.0 2.5 170 chr3R 28652231 intergenic not near genes chr3R 28652316 intergenic not near genes chr3R 28652401 intergenic not near genes chr3R_15_28650001 chr3R_28650001 D17-c3 2869 chr3R 28655365 28655400 chr3R 28655492 28655527 25 127 12.5 4.0 8.2 2.7 162 chr3R 28655365 intergenic not near genes chr3R 28655446 intergenic not near genes chr3R 28655527 intergenic not near genes chr3R_25_28655001 chr3R_28655001 D17-c3 2870 chr3R 28671412 28671467 chr3R 28671561 28671616 33 149 10.5 9.5 10.0 3.0 204 chr3R 28671412 exon CG9989 + chr3R 28671514 exon CG9989 + chr3R 28671616 exon CG9989 + chr3R_33_28670001 chr3R_28670001 D17-c3 2871 chr3R 28744594 28744597 chr3R 28744726 28744734 4 136 15.0 20.5 17.8 0.2 140 chr3R 28744594 5` UTR AstA-R2 - chr3R 28744664 5` UTR AstA-R2 - chr3R 28744734 5` UTR AstA-R2 - chr3R_4_28740001 chr3R_28740001 D17-c3 2872 chr3R 28744598 28744615 chr3R 28744725 28744752 12 135 10.5 19.5 15.0 0.8 154 chr3R 28744598 5` UTR AstA-R2 - chr3R 28744675 5` UTR AstA-R2 - chr3R 28744752 5` UTR AstA-R2 - chr3R_12_28740001 chr3R_28740001 D17-c3 2873 chr3R 28758263 28758278 chr3R 28763905 28763920 roo 5 5642 16.0 0.0 8.0 0.6 5657 chr3R 28758263 intergenic aqrs - chr3R 28761092 intergenic not near genes chr3R 28763920 intergenic not near genes chr3R_5_28760001 chr3R_28760001 D17-c3 2874 chr3R 28792874 28792902 chr3R 28797969 28798014 jockey 12 5107 5.0 2.5 3.8 2.5 5140 chr3R 28792874 intergenic not near genes chr3R 28795444 intergenic not near genes chr3R 28798014 intergenic not near genes chr3R_12_28795001 chr3R_28795001 D17-c3 2875 chr3R 21907534 21907536 chr3R 28831801 28831802 113 6924266 33.5 39.0 36.2 3.0 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_113_25365001 chr3R_25365001 D17-c3 2876 chr3R 28862122 28862150 chr3R 28862224 28862252 18 102 11.0 6.0 8.5 1.9 130 chr3R 28862122 intron spg + chr3R 28862187 intron spg + chr3R 28862252 intron spg + chr3R_18_28860001 chr3R_28860001 D17-c3 2877 chr3R 28950229 28950277 chr3R 28950335 28950386 9 106 2.5 2.5 2.5 2.6 157 chr3R 28950229 intron CG14521 - chr3R 28950308 intron CG14521 - chr3R 28950386 intron CG14521 - chr3R_9_28950001 chr3R_28950001 D17-c3 2878 chr3R 28962098 28962154 chr3R 28962578 28962634 27 480 7.5 5.0 6.2 3.8 536 chr3R 28962098 intron CG14521 - chr3R 28962366 intron CG14521 - chr3R 28962634 intron CG14521 - chr3R_27_28960001 chr3R_28960001 D17-c3 2879 chr3R 29004999 29005041 chr3R 29005336 29005378 17 337 6.5 4.0 5.2 2.7 379 chr3R 29004999 intron wat - chr3R 29005188 intron wat - chr3R 29005378 intron wat - chr3R_17_29005001 chr3R_29005001 D17-c3 2880 chr3R 29012939 29012989 chr3R 29013051 29013101 19 112 3.0 6.5 4.8 3.3 162 chr3R 29012939 intron wat - chr3R 29013020 intron wat - chr3R 29013101 intron wat - chr3R_19_29010001 chr3R_29010001 D17-c3 2881 chr3R 29048404 29048427 chr3R 29048571 29048598 10 169 11.0 7.5 9.2 1.0 194 chr3R 29048404 3` UTR Pkc98E + chr3R 29048501 3` UTR Pkc98E + chr3R 29048598 3` UTR Pkc98E + chr3R_10_29045001 chr3R_29045001 D17-c3 2882 chr3R 29054139 29054178 chr3R 29054320 29054359 23 181 12.0 5.0 8.5 2.4 220 chr3R 29054139 intergenic CG11843 +,CG11842 + chr3R 29054249 intergenic CG11843 +,CG11842 + chr3R 29054359 5` UTR CG11843 + chr3R_23_29050001 chr3R_29050001 D17-c3 2883 chr3R 29070032 29070079 chr3R 29070138 29070185 15 105 6.0 7.5 6.8 1.9 153 chr3R 29070032 intron CG11873 + chr3R 29070108 intron CG11873 + chr3R 29070185 intron CG11873 + chr3R_15_29070001 chr3R_29070001 D17-c3 2884 chr3R 29079355 29079406 chr3R 29080752 29080803 NOF 22 1397 8.5 8.0 8.2 2.4 1448 chr3R 29079355 intron CG11873 + chr3R 29080079 intron CG11873 + chr3R 29080803 intron CG11873 + chr3R_22_29080001 chr3R_29080001 D17-c3 2885 chr3R 29140138 29140184 chr3R 29140267 29140313 29 129 10.5 10.5 10.5 2.5 175 chr3R 29140138 intron CG14516 + chr3R 29140226 intron CG14516 + chr3R 29140313 intron CG14516 + chr3R_29_29140001 chr3R_29140001 D17-c3 2886 chr3R 29237266 29237540 chr3R 29239270 29239458 8 1929 22.5 1.5 12.0 0.6 2192 chr3R 29237266 exon CG11951 - chr3R 29238362 intron CG11951 - chr3R 29239458 exon CG31427 - chr3R_8_29235001 chr3R_29235001 D17-c3 2887 chr3R 29239216 29239245 chr3R 29245532 29245561 12 6314 1.5 52.5 27.0 0.4 6345 chr3R 29239216 exon CG31427 - chr3R 29242388 exon CG31445 - chr3R 29245561 exon SP1029 - chr3R_12_29240001 chr3R_29240001 D17-c3 2888 chr3R 29237523 29237536 chr3R 29239407 29239419 10 1883 22.0 11.0 16.5 0.6 1896 chr3R 29237523 exon CG11951 - chr3R 29238471 intron CG11951 - chr3R 29239419 exon CG31427 - chr3R_10_29235001 chr3R_29235001 D17-c3 2889 chr3R 29256241 29256297 chr3R 29256346 29256402 50 105 8.5 8.0 8.2 5.4 161 chr3R 29256241 intergenic CG45544 +,stg - chr3R 29256322 intergenic CG45544 + chr3R 29256402 intergenic CG45544 + chr3R_50_29255001 chr3R_29255001 D17-c3 2890 chr3R 29264183 29264212 chr3R 29264310 29264339 20 127 0.0 11.0 5.5 3.1 156 chr3R 29264183 intergenic not near genes chr3R 29264261 intergenic not near genes chr3R 29264339 intergenic not near genes chr3R_20_29260001 chr3R_29260001 D17-c3 2891 chr3R 29290069 29290096 chr3R 29290170 29290197 12 100 9.0 2.0 5.5 1.8 128 chr3R 29290069 intergenic not near genes chr3R 29290133 intergenic not near genes chr3R 29290197 intergenic not near genes chr3R_12_29290001 chr3R_29290001 D17-c3 2892 chr3R 29292022 29292076 chr3R 29292128 29292182 23 106 7.0 6.5 6.8 2.9 160 chr3R 29292022 intergenic not near genes chr3R 29292102 intergenic not near genes chr3R 29292182 intergenic not near genes chr3R_23_29290001 chr3R_29290001 D17-c3 2893 chr3R 29319774 29319852 chr3R 29320138 29320195 jockey 19 347 0.5 7.5 4.0 3.8 421 chr3R 29319774 intergenic Cnx99A - chr3R 29319984 intergenic Cnx99A - chr3R 29320195 intergenic not near genes chr3R_19_29315001 chr3R_29315001 D17-c3 2894 chr3R 29351732 29351755 chr3R 29351842 29351865 13 109 6.5 12.5 9.5 1.2 133 chr3R 29351732 intergenic not near genes chr3R 29351798 intergenic not near genes chr3R 29351865 intergenic not near genes chr3R_13_29350001 chr3R_29350001 D17-c3 2895 chr3R 29356018 29356082 chr3R 29356123 29356188 13 105 1.0 3.0 2.0 4.3 170 chr3R 29356018 intergenic CR45547 - chr3R 29356103 intergenic CR45547 - chr3R 29356188 3` UTR CR45547 - chr3R_13_29355001 chr3R_29355001 D17-c3 2896 chr3R 29376338 29376353 chr3R 29376450 29376466 7 113 10.5 1.5 6.0 1.0 128 chr3R 29376338 intergenic not near genes chr3R 29376402 intergenic not near genes chr3R 29376466 intergenic not near genes chr3R_7_29375001 chr3R_29375001 D17-c3 2897 chr3R 29376361 29376365 chr3R 29376448 29376478 7 108 8.5 1.5 5.0 1.2 117 chr3R 29376361 intergenic not near genes chr3R 29376420 intergenic not near genes chr3R 29376478 intergenic not near genes chr3R_7_29375001 chr3R_29375001 D17-c3 2898 chr3R 29406611 29406636 chr3R 29407922 29407947 jockey 9 1311 18.5 7.0 12.8 0.7 1336 chr3R 29406611 intron Ptp99A + chr3R 29407279 intron Ptp99A + chr3R 29407947 intron Ptp99A + chr3R_9_29405001 chr3R_29405001 D17-c3 2899 chr3R 29406637 29406644 chr3R 29407900 29407945 jockey 7 1302 14.0 3.5 8.8 0.7 1308 chr3R 29406637 intron Ptp99A + chr3R 29407291 intron Ptp99A + chr3R 29407945 intron Ptp99A + chr3R_7_29405001 chr3R_29405001 D17-c3 2900 chr3R 29446968 29446971 chr3R 29447080 29447083 4 112 17.5 4.5 11.0 0.3 115 chr3R 29446968 intron Ptp99A + chr3R 29447026 intron Ptp99A + chr3R 29447083 intron Ptp99A + chr3R_4_29445001 chr3R_29445001 D17-c3 2901 chr3R 29446973 29447024 chr3R 29447079 29447108 25 108 7.5 4.5 6.0 3.6 135 chr3R 29446973 intron Ptp99A + chr3R 29447040 intron Ptp99A + chr3R 29447108 intron Ptp99A + chr3R_25_29445001 chr3R_29445001 D17-c3 2902 chr3R 29449332 29449384 chr3R 29449435 29449487 15 103 6.5 8.0 7.2 1.8 155 chr3R 29449332 intron Ptp99A + chr3R 29449410 intron Ptp99A + chr3R 29449487 intron Ptp99A + chr3R_15_29445001 chr3R_29445001 D17-c3 2903 chr3R 29452595 29452637 chr3R 29452718 29452761 31 123 2.5 4.0 3.2 7.4 166 chr3R 29452595 intron Ptp99A + chr3R 29452678 intron Ptp99A + chr3R 29452761 intron Ptp99A + chr3R_31_29450001 chr3R_29450001 D17-c3 2904 chr3R 29474414 29474453 chr3R 29474526 29474565 12 112 5.0 3.0 4.0 2.4 151 chr3R 29474414 intron Ptp99A + chr3R 29474490 intron Ptp99A + chr3R 29474565 intron Ptp99A + chr3R_12_29470001 chr3R_29470001 D17-c3 2905 chr3R 29505869 29505925 chr3R 29505971 29506026 16 101 4.0 9.5 6.8 2.1 157 chr3R 29505869 intergenic not near genes chr3R 29505948 intergenic not near genes chr3R 29506026 intergenic not near genes chr3R_16_29505001 chr3R_29505001 D17-c3 2906 chr3R 29539407 29539437 chr3R 29539508 29539538 13 100 11.5 0.0 5.8 1.9 131 chr3R 29539407 intergenic not near genes chr3R 29539472 intergenic not near genes chr3R 29539538 intergenic not near genes chr3R_13_29535001 chr3R_29535001 D17-c3 2907 chr3R 29566355 29566411 chr3R 29566457 29566513 23 102 7.0 4.5 5.8 3.4 158 chr3R 29566355 intergenic not near genes chr3R 29566434 intergenic not near genes chr3R 29566513 intergenic not near genes chr3R_23_29565001 chr3R_29565001 D17-c3 2908 chr3R 29590349 29590404 chr3R 29590467 29590522 43 117 6.0 11.0 8.5 4.5 173 chr3R 29590349 exon CG31041 - chr3R 29590436 intron CG31041 - chr3R 29590522 exon CG31041 - chr3R_43_29590001 chr3R_29590001 D17-c3 2909 chr3R 29662047 29662102 chr3R 29662209 29662264 25 161 3.0 6.5 4.8 4.3 217 chr3R 29662047 intergenic not near genes chr3R 29662156 intergenic not near genes chr3R 29662264 intergenic not near genes chr3R_25_29660001 chr3R_29660001 D17-c3 2910 chr3R 29738249 29738295 chr3R 29739741 29739787 hobo 15 1492 4.5 9.0 6.8 1.9 1538 chr3R 29738249 intergenic CG1969 +,CG7598 + chr3R 29739018 intron CG1969 + chr3R 29739787 5` UTR CG1969 + chr3R_15_29735001 chr3R_29735001 D17-c3 2911 chr3R 29758912 29758970 chr3R 29759015 29759073 54 101 11.5 11.0 11.2 4.4 161 chr3R 29758912 3` UTR CR44953 - chr3R 29758992 3` UTR CR44953 - chr3R 29759073 intergenic CR44953 - chr3R_54_29755001 chr3R_29755001 D17-c3 2912 chr3R 29760337 29760377 chr3R 29761563 29761603 pogo 9 1226 8.0 3.5 5.8 1.3 1266 chr3R 29760337 intergenic not near genes chr3R 29760970 intergenic not near genes chr3R 29761603 intergenic not near genes chr3R_9_29760001 chr3R_29760001 D17-c3 2913 chr3R 29831786 29831840 chr3R 29831896 29831950 35 110 12.0 13.5 12.8 2.5 164 chr3R 29831786 exon Atg16 - chr3R 29831868 intron Atg16 - chr3R 29831950 exon Atg16 - chr3R_35_29830001 chr3R_29830001 D17-c3 2914 chr3R 29881997 29882045 chr3R 29891179 29891227 roo 16 9182 7.0 8.0 7.5 1.9 9230 chr3R 29881997 intron CG31038 + chr3R 29886612 intron CG31038 + chr3R 29891227 intron CG31038 + chr3R_16_29885001 chr3R_29885001 D17-c3 2915 chr3R 29950549 29950599 chr3R 29950651 29950701 20 91 5.5 10.0 7.8 2.3 152 chr3R 29950549 intergenic TkR99D - chr3R 29950625 intergenic TkR99D - chr3R 29950701 intergenic TkR99D - chr3R_20_29950001 chr3R_29950001 D17-c3 2916 chr3R 29963471 29963512 chr3R 29963598 29963639 23 126 7.5 8.5 8.0 2.6 168 chr3R 29963471 intron TkR99D - chr3R 29963555 intron TkR99D - chr3R 29963639 intron TkR99D - chr3R_23_29960001 chr3R_29960001 D17-c3 2917 chr3R 29966037 29966071 chr3R 29966142 29966173 21 102 7.0 15.5 11.2 1.7 136 chr3R 29966037 intron TkR99D - chr3R 29966105 intron TkR99D - chr3R 29966173 intron TkR99D - chr3R_21_29965001 chr3R_29965001 D17-c3 2918 chr3R 29982462 29982472 chr3R 29982568 29982578 8 105 13.5 15.5 14.5 0.5 116 chr3R 29982462 intergenic not near genes chr3R 29982520 intergenic not near genes chr3R 29982578 intergenic not near genes chr3R_8_29980001 chr3R_29980001 D17-c3 2919 chr3R 30005641 30005648 chr3R 30013423 30013470 6 7789 26.5 50.0 38.2 0.2 7829 chr3R 30005641 intron Nlp + chr3R 30009556 intron Nlp + chr3R 30013470 intron CG7920 - chr3R_6_30005001 chr3R_30005001 D17-c3 2920 chr3R 30084828 30084876 chr3R 30086320 30086368 hobo 17 1492 10.5 7.5 9.0 1.7 1540 chr3R 30084828 intron sima + chr3R 30085598 intron sima + chr3R 30086368 intron sima + chr3R_17_30085001 chr3R_30085001 D17-c3 2921 chr3R 31137129 31137183 chr3R 31137234 31137288 28 102 6.5 5.5 6.0 4.0 159 chr3R 31137129 intron Gycbeta100B + chr3R 31137208 intron Gycbeta100B + chr3R 31137288 intron Gycbeta100B + chr3R_28_31135001 chr3R_31135001 D17-c3 2922 chr3R 31167684 31167700 chr3R 31167788 31167804 8 104 0.0 2.5 1.2 3.6 120 chr3R 31167684 intron,intron Gycbeta100B +,stops - chr3R 31167744 intron,intron Gycbeta100B +,stops - chr3R 31167804 intron,intron Gycbeta100B +,stops - chr3R_8_31165001 chr3R_31165001 D17-c3 2923 chr3R 31279358 31279408 chr3R 31285571 31285624 diver 27 6215 9.5 8.0 8.8 2.8 6266 chr3R 31279358 intergenic not near genes chr3R 31282491 intergenic not near genes chr3R 31285624 intergenic not near genes chr3R_27_31280001 chr3R_31280001 D17-c3 2924 chr3R 31323307 31323348 chr3R 31323528 31323581 13 224 13.5 10.0 11.8 1.0 274 chr3R 31323307 intron CG34347 + chr3R 31323444 intron CG34347 + chr3R 31323581 intron CG34347 + chr3R_13_31320001 chr3R_31320001 D17-c3 2925 chr3R 31413070 31413090 chr3R 31418295 31418314 copia 14 5224 18.0 1.0 9.5 1.3 5244 chr3R 31413070 intron Gprk2 + chr3R 31415692 intron Gprk2 + chr3R 31418314 intron Gprk2 + chr3R_14_31415001 chr3R_31415001 D17-c3 2926 chr3R 31413092 31413115 chr3R 31418292 31418310 copia 11 5213 12.5 1.0 6.8 1.4 5218 chr3R 31413092 intron Gprk2 + chr3R 31415701 intron Gprk2 + chr3R 31418310 intron Gprk2 + chr3R_11_31415001 chr3R_31415001 D17-c3 2927 chr3R 31426859 31426910 chr3R 31426976 31427027 23 117 5.5 7.0 6.2 3.2 168 chr3R 31426859 intron Gprk2 + chr3R 31426943 intron Gprk2 + chr3R 31427027 intron Gprk2 + chr3R_23_31425001 chr3R_31425001 D17-c3 2928 chr3R 31435337 31435391 chr3R 31435514 31435568 37 177 6.5 6.0 6.2 5.1 231 chr3R 31435337 intron Gprk2 + chr3R 31435452 intron Gprk2 + chr3R 31435568 intron Gprk2 + chr3R_37_31435001 chr3R_31435001 D17-c3 2929 chr3R 31549391 31549449 chr3R 31549617 31549675 31 225 4.5 4.5 4.5 5.6 284 chr3R 31549391 intron nyo + chr3R 31549533 intron nyo + chr3R 31549675 intron nyo + chr3R_31_31545001 chr3R_31545001 D17-c3 2930 chr3R 31691508 31691562 chr3R 31696299 31696353 Doc 32 4791 6.5 9.0 7.8 3.6 4845 chr3R 31691508 intergenic not near genes chr3R 31693930 intergenic not near genes chr3R 31696353 intergenic not near genes chr3R_32_31690001 chr3R_31690001 D17-c3 2931 chr3R 31774847 31774893 chr3R 31775017 31775063 16 170 13.5 5.0 9.2 1.6 216 chr3R 31774847 3` UTR sip3 + chr3R 31774955 3` UTR sip3 + chr3R 31775063 3` UTR,3` UTR sip3 +,CG2126 - chr3R_16_31770001 chr3R_31770001 D17-c3 2932 chr3R 31808589 31808640 chr3R 31808690 31808741 16 101 3.5 5.5 4.5 2.9 152 chr3R 31808589 intron CG11576 - chr3R 31808665 intron CG11576 - chr3R 31808741 intron CG11576 - chr3R_16_31805001 chr3R_31805001 D17-c3 2933 chr3R 31841749 31841806 chr3R 31841878 31841935 21 129 8.5 7.5 8.0 2.3 186 chr3R 31841749 exon RhoGAP100F + chr3R 31841842 3` UTR RhoGAP100F + chr3R 31841935 3` UTR RhoGAP100F + chr3R_21_31840001 chr3R_31840001 D17-c3 2934 chr3R 31858149 31858206 chr3R 31858274 31858334 6 127 0.0 4.0 2.0 2.0 185 chr3R 31858149 intron heph - chr3R 31858242 intron heph - chr3R 31858334 intron heph - chr3R_6_31855001 chr3R_31855001 D17-c3 2935 chr3R 31905058 31905103 chr3R 31905507 31905552 25 449 5.5 10.0 7.8 2.8 494 chr3R 31905058 intron heph - chr3R 31905305 intron heph - chr3R 31905552 intron heph - chr3R_25_31905001 chr3R_31905001 D17-c3 2936 chr3R 31924599 31924602 chr3R 31924705 31924708 5 106 0.0 24.5 12.2 0.4 109 chr3R 31924599 intron heph - chr3R 31924654 intron heph - chr3R 31924708 intron heph - chr3R_5_31920001 chr3R_31920001 D17-c3 2937 chr3R 31926342 31926395 chr3R 31926443 31926499 20 102 8.5 6.0 7.2 2.4 157 chr3R 31926342 intron heph - chr3R 31926420 intron heph - chr3R 31926499 intron heph - chr3R_20_31925001 chr3R_31925001 D17-c3 2938 chr3R 31930871 31930896 chr3R 31931007 31931031 12 135 7.5 6.5 7.0 1.5 160 chr3R 31930871 intron heph - chr3R 31930951 intron heph - chr3R 31931031 intron heph - chr3R_12_31930001 chr3R_31930001 D17-c3 2939 chr3R 31931171 31931213 chr3R 31931279 31931319 12 108 4.5 6.5 5.5 1.8 148 chr3R 31931171 intron heph - chr3R 31931245 intron heph - chr3R 31931319 intron heph - chr3R_12_31930001 chr3R_31930001 D17-c3 2940 chr3R 31997973 31998022 chr3R 32005462 32005517 blood 19 7493 6.0 3.5 4.8 3.3 7544 chr3R 31997973 intron heph - chr3R 32001745 intron heph - chr3R 32005517 intron heph - chr3R_19_32000001 chr3R_32000001 D17-c3 2941 chr3R 32009972 32010016 chr3R 32010122 32010166 20 146 6.0 5.5 5.8 2.9 194 chr3R 32009972 intron heph - chr3R 32010069 intron heph - chr3R 32010166 intron heph - chr3R_20_32010001 chr3R_32010001 D17-c3 2942 chr4 76473 76512 chr4 81941 81980 I-element 19 5468 10.5 4.5 7.5 2.2 5507 chr4 76473 intron pan + chr4 79226 intron pan + chr4 81980 intron pan + chr4_19_75001 chr4_75001 D17-c3 2943 chr4 319968 320019 chr4 328171 328205 Stalker2 9 8199 4.5 9.0 6.8 1.2 8237 chr4 319968 3` UTR CG32850 + chr4 324086 intron CG32850 + chr4 328205 3` UTR,3` UTR CG32850 +,PMCA - chr4_9_320001 chr4_320001 D17-c3 2944 chr4 671584 671595 chr4 680192 680203 Tirant 5 8608 23.5 12.0 17.8 0.3 8619 chr4 671584 intron CG11360 + chr4 675894 intron CG11360 + chr4 680203 intron CG11360 + chr4_5_675001 chr4_675001 D17-c3 2945 chr4 671597 671626 chr4 680190 680234 Tirant 19 8607 15.5 12.0 13.8 1.3 8637 chr4 671597 intron CG11360 + chr4 675916 intron CG11360 + chr4 680234 intron CG11360 + chr4_19_675001 chr4_675001 D17-c3 2946 chr4 959600 959654 chr4 959804 959858 23 203 5.0 5.0 5.0 3.8 258 chr4 959600 intergenic CR44030 +,CR45201 - chr4 959729 5` UTR CR44030 + chr4 959858 5` UTR CR44030 + chr4_23_955001 chr4_955001 D17-c3 2947 chr4 972477 972527 chr4 972584 972634 11 107 2.0 2.5 2.2 3.4 157 chr4 972477 intron fuss - chr4 972556 intron fuss - chr4 972634 intron fuss - chr4_11_970001 chr4_970001 D17-c3 2948 chrX 428399 428440 chrX 434609 434650 3S18 13 6209 8.0 2.5 5.2 2.1 6251 chrX 428399 intron CG32816 - chrX 431524 intron CG32816 - chrX 434650 intron CG32816 - chrX_13_430001 chrX_430001 D17-c3 2949 chrX 827586 827631 chrX 835403 835448 roo 7 7817 5.0 3.0 4.0 1.4 7862 chrX 827586 intron CG43867 - chrX 831517 intron CG43867 - chrX 835448 intron CG43867 - chrX_7_830001 chrX_830001 D17-c3 2950 chrX 906676 906733 chrX 908490 908547 S-element 24 1814 7.5 9.5 8.5 2.5 1871 chrX 906676 intron CG43867 - chrX 907612 intron CG43867 - chrX 908547 intron CG43867 - chrX_24_905001 chrX_905001 D17-c3 2951 chrX 1196280 1196329 chrX 1196404 1196453 9 124 18.5 19.5 19.0 0.5 173 chrX 1196280 3` UTR CG11380 + chrX 1196366 3` UTR CG11380 + chrX 1196453 3` UTR CG11380 + chrX_9_1195001 chrX_1195001 D17-c3 2952 chrX 1482407 1482459 chrX 1482671 1482714 22 254 81.0 83.0 82.0 0.3 307 chrX 1482407 exon sta - chrX 1482560 intron,3` UTR,3` UTR sta -,snoRNA:M -,snoRNA:Me28S-G980 - chrX 1482714 exon sta - chrX_22_1480001 chrX_1480001 D17-c3 2953 chrX 1482838 1482863 chrX 1483258 1483263 6 416 80.5 45.0 62.8 0.1 425 chrX 1482838 exon sta - chrX 1483050 intron sta - chrX 1483263 5` UTR sta - chrX_6_1480001 chrX_1480001 D17-c3 2954 chrX 1627968 1627977 chrX 1635461 1635469 gtwin 5 7493 16.5 15.0 15.8 0.3 7501 chrX 1627968 intron,intron Mur2B -,br + chrX 1631718 intron,intron Mur2B -,br + chrX 1635469 intron,intron Mur2B -,br + chrX_5_1630001 chrX_1630001 D17-c3 2955 chrX 2308819 2308825 chrX 2317427 2317428 Tirant 5 8607 6.5 28.0 17.2 0.3 8609 chrX 2308819 intron phl + chrX 2313124 intron phl + chrX 2317428 intron phl + chrX_5_2310001 chrX_2310001 D17-c3 2956 chrX 2399818 2399860 chrX 2408188 2408223 roo 46 8374 14.5 17.0 15.8 2.7 8405 chrX 2399818 intergenic not near genes chrX 2404020 intergenic not near genes chrX 2408223 intergenic not near genes chrX_46_2400001 chrX_2400001 D17-c3 2957 chrX 2506486 2506534 chrX 2506592 2506637 9 106 0.5 10.0 5.2 1.5 151 chrX 2506486 intron trol - chrX 2506562 intron trol - chrX 2506637 intron trol - chrX_9_2505001 chrX_2505001 D17-c3 2958 chrX 2578788 2578842 chrX 2578905 2578959 41 117 7.0 5.0 6.0 5.9 171 chrX 2578788 intergenic Pdfr +,Vha36-3 - chrX 2578874 intergenic Vha36-3 -,Pdfr + chrX 2578959 intergenic Vha36-3 -,Pdfr + chrX_41_2575001 chrX_2575001 D17-c3 2959 chrX 2610364 2610414 chrX 2617506 2617556 HMS-Beagle 12 7142 11.0 1.5 6.2 1.7 7192 chrX 2610364 intergenic CG8636 - chrX 2613960 intergenic not near genes chrX 2617556 intergenic Tsp3A - chrX_12_2610001 chrX_2610001 D17-c3 2960 chrX 2664362 2664412 chrX 2665533 2665582 1360 16 1171 7.5 6.0 6.8 2.1 1220 chrX 2664362 intron sgg + chrX 2664972 intron sgg + chrX 2665582 intron sgg + chrX_16_2660001 chrX_2660001 D17-c3 2961 chrX 2814039 2814042 chrX 2814171 2814174 4 132 10.5 0.0 5.2 0.6 135 chrX 2814039 intron kirre + chrX 2814106 intron kirre + chrX 2814174 intron kirre + chrX_4_2810001 chrX_2810001 D17-c3 2962 chrX 2823772 2823779 chrX 2832340 2832352 roo 6 8572 11.5 10.0 10.8 0.5 8580 chrX 2823772 intron kirre + chrX 2828062 intron kirre + chrX 2832352 intron kirre + chrX_6_2825001 chrX_2825001 D17-c3 2963 chrX 2844876 2844930 chrX 2852311 2852365 mdg1 17 7435 3.5 7.0 5.2 2.7 7489 chrX 2844876 intron kirre + chrX 2848620 intron kirre + chrX 2852365 intron kirre + chrX_17_2845001 chrX_2845001 D17-c3 2964 chrX 2888091 2888146 chrX 2888189 2888249 40 101 11.5 13.0 12.2 3.0 158 chrX 2888091 intron kirre + chrX 2888170 intron kirre + chrX 2888249 intron kirre + chrX_40_2885001 chrX_2885001 D17-c3 2965 chrX 2972009 2972034 chrX 2972174 2972180 4 160 5.5 8.0 6.8 0.5 171 chrX 2972009 intron,intron kirre +,rst - chrX 2972094 intron,intron kirre +,rst - chrX 2972180 intron,intron kirre +,rst - chrX_4_2970001 chrX_2970001 D17-c3 2966 chrX 3031133 3031189 chrX 3031239 3031297 14 104 5.5 3.5 4.5 2.5 164 chrX 3031133 intron kirre + chrX 3031215 intron kirre + chrX 3031297 intron kirre + chrX_14_3030001 chrX_3030001 D17-c3 2967 chrX 3057999 3058045 chrX 3058265 3058311 pogo 12 266 7.0 2.0 4.5 2.2 312 chrX 3057999 intron kirre + chrX 3058155 intron kirre + chrX 3058311 intron kirre + chrX_12_3055001 chrX_3055001 D17-c3 2968 chrX 3120076 3120098 chrX 3120157 3120201 12 96 0.5 7.5 4.0 2.4 125 chrX 3120076 intron kirre + chrX 3120138 intron kirre + chrX 3120201 intron kirre + chrX_12_3120001 chrX_3120001 D17-c3 2969 chrX 3206496 3206503 chrX 3206585 3206607 4 100 2.5 8.5 5.5 0.6 111 chrX 3206496 intron dnc + chrX 3206552 intron dnc + chrX 3206607 intron dnc + chrX_4_3205001 chrX_3205001 D17-c3 2970 chrX 3212594 3212617 chrX 3212664 3212727 4 100 3.5 1.0 2.2 1.2 133 chrX 3212594 intron dnc + chrX 3212660 intron dnc + chrX 3212727 intron dnc + chrX_4_3210001 chrX_3210001 D17-c3 2971 chrX 3218488 3218538 chrX 3227662 3227712 roo 5 9174 1.5 2.5 2.0 1.7 9224 chrX 3218488 intron dnc + chrX 3223100 intron dnc + chrX 3227712 intron dnc + chrX_5_3220001 chrX_3220001 D17-c3 2972 chrX 3243623 3243654 chrX 3243738 3243769 12 115 6.5 5.5 6.0 1.7 146 chrX 3243623 intron dnc + chrX 3243696 intron dnc + chrX 3243769 intron dnc + chrX_12_3240001 chrX_3240001 D17-c3 2973 chrX 3264341 3264371 chrX 3264494 3264524 21 152 14.5 13.5 14.0 1.4 183 chrX 3264341 intron dnc + chrX 3264432 intron dnc + chrX 3264524 intron dnc + chrX_21_3260001 chrX_3260001 D17-c3 2974 chrX 3264374 3264379 chrX 3264491 3264532 5 140 11.5 13.0 12.2 0.4 158 chrX 3264374 intron dnc + chrX 3264453 intron dnc + chrX 3264532 intron dnc + chrX_5_3260001 chrX_3260001 D17-c3 2975 chrX 3306318 3306374 chrX 3306425 3306471 13 106 4.5 1.0 2.8 3.4 153 chrX 3306318 intron dnc + chrX 3306394 intron dnc + chrX 3306471 intron dnc + chrX_13_3305001 chrX_3305001 D17-c3 2976 chrX 3328277 3328297 chrX 3328880 3328900 13 603 0.0 16.0 8.0 1.4 623 chrX 3328277 intron,intron dnc +,CR44886 - chrX 3328588 intron,intron dnc +,CR44886 - chrX 3328900 intron,intron dnc +,CR44886 - chrX_13_3325001 chrX_3325001 D17-c3 2977 chrX 3351778 3351812 chrX 3351889 3351916 11 105 12.0 14.0 13.0 0.8 138 chrX 3351778 intergenic not near genes chrX 3351847 intergenic not near genes chrX 3351916 intergenic not near genes chrX_11_3350001 chrX_3350001 D17-c3 2978 chrX 3414999 3415037 chrX 3421209 3421247 3S18 11 6210 3.0 8.5 5.8 1.6 6248 chrX 3414999 intron,intron CR44999 +,CG12535 - chrX 3418123 intron,intron CR44999 +,CG12535 - chrX 3421247 intron,intron CR44999 +,CG12535 - chrX_11_3415001 chrX_3415001 D17-c3 2979 chrX 3433406 3433435 chrX 3433516 3433520 13 105 16.0 10.0 13.0 0.9 114 chrX 3433406 intron,intron CR44999 +,CG12535 - chrX 3433463 intron,intron CR44999 +,CG12535 - chrX 3433520 intron,intron CR44999 +,CG12535 - chrX_13_3430001 chrX_3430001 D17-c3 2980 chrX 3459956 3460015 chrX 3460058 3460117 32 102 7.5 6.0 6.8 4.1 161 chrX 3459956 intron,intron CR44999 +,CG16782 - chrX 3460036 intron,5` UTR CR44999 +,CG16782 - chrX 3460117 intron,5` UTR CR44999 +,CG16782 - chrX_32_3460001 chrX_3460001 D17-c3 2981 chrX 3481722 3481771 chrX 3481818 3481872 26 101 5.0 7.0 6.0 3.7 150 chrX 3481722 intron,intron CR44999 +,CG10804 - chrX 3481797 intron,intron CR44999 +,CG10804 - chrX 3481872 intron,intron CR44999 +,CG10804 - chrX_26_3480001 chrX_3480001 D17-c3 2982 chrX 3493071 3493078 chrX 3502255 3502262 roo 7 9184 12.5 7.5 10.0 0.6 9191 chrX 3493071 intron,intron CR44999 +,Gas8 - chrX 3497666 intron,intron CR44999 +,Gas8 - chrX 3502262 intron,intron CR44999 +,Gas8 - chrX_7_3495001 chrX_3495001 D17-c3 2983 chrX 3493080 3493117 chrX 3502249 3502300 roo 21 9183 5.0 4.0 4.5 3.8 9220 chrX 3493080 intron,intron CR44999 +,Gas8 - chrX 3497690 intron,intron CR44999 +,Gas8 - chrX 3502300 intron,intron CR44999 +,Gas8 - chrX_21_3495001 chrX_3495001 D17-c3 2984 chrX 3513734 3513789 chrX 3513842 3513897 31 108 5.0 4.0 4.5 5.6 163 chrX 3513734 intron,intron CR44999 +,CG32791 - chrX 3513816 intron,intron CR44999 +,CG32791 - chrX 3513897 intron,intron CR44999 +,CG32791 - chrX_31_3510001 chrX_3510001 D17-c3 2985 chrX 3535386 3535431 chrX 3535502 3535547 14 115 6.0 5.5 5.8 2.1 161 chrX 3535386 intron CG32791 - chrX 3535466 intron CG32791 - chrX 3535547 intron CG32791 - chrX_14_3535001 chrX_3535001 D17-c3 2986 chrX 3597531 3597579 chrX 3619724 3619772 roo 31 22192 12.0 10.0 11.0 2.6 22241 chrX 3597531 intron AstA-R1 + chrX 3608652 intron AstA-R1 + chrX 3619772 intron AstA-R1 + chrX_31_3605001 chrX_3605001 D17-c3 2987 chrX 3657389 3657447 chrX 3657494 3657552 37 104 7.0 8.0 7.5 4.4 163 chrX 3657389 intron AstA-R1 + chrX 3657470 intron AstA-R1 + chrX 3657552 intron AstA-R1 + chrX_37_3655001 chrX_3655001 D17-c3 2988 chrX 3662457 3662498 chrX 3662565 3662592 11 105 15.5 2.5 9.0 1.1 135 chrX 3662457 intron AstA-R1 + chrX 3662524 intron AstA-R1 + chrX 3662592 intron AstA-R1 + chrX_11_3660001 chrX_3660001 D17-c3 2989 chrX 3703686 3703696 chrX 3703799 3703809 4 113 2.0 3.5 2.8 1.1 123 chrX 3703686 intergenic CR45102 + chrX 3703748 intergenic CR45102 + chrX 3703809 intergenic not near genes chrX_4_3700001 chrX_3700001 D17-c3 2990 chrX 3713078 3713137 chrX 3713211 3713271 17 134 4.5 4.0 4.2 3.3 193 chrX 3713078 intron Rala - chrX 3713174 intron Rala - chrX 3713271 intron Rala - chrX_17_3710001 chrX_3710001 D17-c3 2991 chrX 3726742 3726790 chrX 3730164 3730192 NOF 19 3421 4.5 0.0 2.2 5.9 3450 chrX 3726742 intron tlk + chrX 3728467 intron tlk + chrX 3730192 intron tlk + chrX_19_3725001 chrX_3725001 D17-c3 2992 chrX 3768251 3768282 chrX 3768353 3768364 9 98 9.0 8.5 8.8 0.9 113 chrX 3768251 intron tlk + chrX 3768308 intron tlk + chrX 3768364 intron tlk + chrX_9_3765001 chrX_3765001 D17-c3 2993 chrX 3798046 3798062 chrX 3798162 3798178 15 116 11.0 21.0 16.0 0.9 132 chrX 3798046 intergenic not near genes chrX 3798112 intergenic not near genes chrX 3798178 intergenic not near genes chrX_15_3795001 chrX_3795001 D17-c3 2994 chrX 3817073 3817109 chrX 3817184 3817220 18 110 4.5 11.0 7.8 2.0 147 chrX 3817073 intron ec + chrX 3817146 intron ec + chrX 3817220 intron ec + chrX_18_3815001 chrX_3815001 D17-c3 2995 chrX 3842329 3842343 chrX 3842572 3842576 pogo 10 242 7.0 7.0 7.0 1.2 247 chrX 3842329 intron ec + chrX 3842452 intron ec + chrX 3842576 intron ec + chrX_10_3840001 chrX_3840001 D17-c3 2996 chrX 3862804 3862848 chrX 3862916 3862960 10 112 4.5 5.0 4.8 1.7 156 chrX 3862804 intergenic yin - chrX 3862882 intergenic yin - chrX 3862960 intergenic yin - chrX_10_3860001 chrX_3860001 D17-c3 2997 chrX 3866083 3866127 chrX 3866186 3866230 15 103 4.5 2.0 3.2 3.6 147 chrX 3866083 intron yin - chrX 3866156 intron yin - chrX 3866230 intron yin - chrX_15_3865001 chrX_3865001 D17-c3 2998 chrX 3874738 3874772 chrX 3874829 3874872 18 104 7.0 10.0 8.5 1.9 134 chrX 3874738 intron CG2930 + chrX 3874805 intron CG2930 + chrX 3874872 intron CG2930 + chrX_18_3870001 chrX_3870001 D17-c3 2999 chrX 3881246 3881305 chrX 3881410 3881469 58 163 7.0 7.5 7.2 7.1 223 chrX 3881246 intron VhaAC39-1 + chrX 3881358 intron VhaAC39-1 + chrX 3881469 exon VhaAC39-1 + chrX_58_3880001 chrX_3880001 D17-c3 3000 chrX 3890637 3890686 chrX 3890987 3891036 28 349 4.5 6.0 5.2 4.5 399 chrX 3890637 intergenic CG15239 + chrX 3890836 intergenic CG15239 + chrX 3891036 intergenic CG42541 - chrX_28_3890001 chrX_3890001 D17-c3 3001 chrX 3899605 3899619 chrX 3899707 3899721 14 102 28.0 22.5 25.2 0.5 116 chrX 3899605 intron CG42541 - chrX 3899663 intron CG42541 - chrX 3899721 intron CG42541 - chrX_14_3895001 chrX_3895001 D17-c3 3002 chrX 3986842 3986894 chrX 3994500 3994552 412 24 7658 4.0 4.0 4.0 4.8 7710 chrX 3986842 intergenic not near genes chrX 3990697 intergenic not near genes chrX 3994552 intergenic not near genes chrX_24_3990001 chrX_3990001 D17-c3 3003 chrX 3999275 3999324 chrX 3999377 3999401 32 104 11.5 11.5 11.5 2.6 126 chrX 3999275 intergenic not near genes chrX 3999338 intergenic not near genes chrX 3999401 intergenic not near genes chrX_32_3995001 chrX_3995001 D17-c3 3004 chrX 4001645 4001660 chrX 4001747 4001755 4 100 1.5 0.0 0.8 2.2 110 chrX 4001645 intergenic CR43298 - chrX 4001700 intergenic CR43298 - chrX 4001755 intergenic CR43298 - chrX_4_4000001 chrX_4000001 D17-c3 3005 chrX 4039054 4039081 chrX 4039156 4039167 14 98 21.0 17.5 19.2 0.7 113 chrX 4039054 intergenic not near genes chrX 4039110 intergenic not near genes chrX 4039167 intergenic not near genes chrX_14_4035001 chrX_4035001 D17-c3 3006 chrX 4067987 4067988 chrX 10754861 10754861 4 6686873 41.5 43.5 42.5 0.1 6686874 chrX 4067987 intergenic not near genes chrX 7411424 3` UTR CG42246 - chrX 10754861 intron Rph - chrX_4_7410001 chrX_7410001 D17-c3 3007 chrX 4101840 4101898 chrX 4101944 4102003 20 104 2.0 6.5 4.2 3.8 163 chrX 4101840 exon CG15375 + chrX 4101922 exon CG15375 + chrX 4102003 exon CG15375 + chrX_20_4100001 chrX_4100001 D17-c3 3008 chrX 4132399 4132425 chrX 4132501 4132527 9 102 5.5 11.0 8.2 1.0 128 chrX 4132399 3` UTR GlcAT-I + chrX 4132463 3` UTR GlcAT-I + chrX 4132527 3` UTR GlcAT-I + chrX_9_4130001 chrX_4130001 D17-c3 3009 chrX 4157873 4157923 chrX 4164951 4165001 297 23 7078 4.0 4.5 4.2 4.4 7128 chrX 4157873 intron Fas2 - chrX 4161437 intron Fas2 - chrX 4165001 intron Fas2 - chrX_23_4160001 chrX_4160001 D17-c3 3010 chrX 4185672 4185722 chrX 4185782 4185832 35 110 10.0 1.0 5.5 5.4 160 chrX 4185672 intron Fas2 - chrX 4185752 intron Fas2 - chrX 4185832 intron Fas2 - chrX_35_4185001 chrX_4185001 D17-c3 3011 chrX 4209906 4209956 chrX 4210021 4210071 10 115 0.0 6.5 3.2 2.4 165 chrX 4209906 intergenic not near genes chrX 4209988 intergenic not near genes chrX 4210071 intergenic not near genes chrX_10_4205001 chrX_4205001 D17-c3 3012 chrX 4216316 4216337 chrX 4216420 4216441 16 104 6.0 9.5 7.8 1.8 125 chrX 4216316 intergenic not near genes chrX 4216378 intergenic CG15571 - chrX 4216441 intergenic CG15571 - chrX_16_4215001 chrX_4215001 D17-c3 3013 chrX 4229965 4229985 chrX 4230100 4230126 8 140 6.5 2.5 4.5 1.5 161 chrX 4229965 intergenic not near genes chrX 4230046 intergenic not near genes chrX 4230126 intergenic not near genes chrX_8_4230001 chrX_4230001 D17-c3 3014 chrX 4230612 4230616 chrX 4230804 4230856 6 225 0.5 2.5 1.5 2.4 244 chrX 4230612 intergenic not near genes chrX 4230734 intergenic not near genes chrX 4230856 intergenic not near genes chrX_6_4230001 chrX_4230001 D17-c3 3015 chrX 4235719 4235741 chrX 4235873 4235882 4 148 8.5 6.5 7.5 0.5 163 chrX 4235719 intergenic not near genes chrX 4235800 intergenic not near genes chrX 4235882 intergenic not near genes chrX_4_4235001 chrX_4235001 D17-c3 3016 chrX 4262730 4262784 chrX 4262854 4262908 35 124 7.5 11.5 9.5 3.3 178 chrX 4262730 intergenic not near genes chrX 4262819 intergenic not near genes chrX 4262908 intergenic not near genes chrX_35_4260001 chrX_4260001 D17-c3 3017 chrX 4267297 4267346 chrX 4267402 4267451 36 105 8.0 10.0 9.0 3.6 154 chrX 4267297 intergenic not near genes chrX 4267374 intergenic not near genes chrX 4267451 intergenic not near genes chrX_36_4265001 chrX_4265001 D17-c3 3018 chrX 4276456 4276511 chrX 4276560 4276575 25 94 5.0 7.0 6.0 3.6 119 chrX 4276456 intergenic CG15577 -,CR45483 - chrX 4276516 3` UTR CG15577 - chrX 4276575 3` UTR CG15577 - chrX_25_4275001 chrX_4275001 D17-c3 3019 chrX 4343860 4343895 chrX 4344000 4344034 10 139 2.5 7.5 5.0 1.7 174 chrX 4343860 intron norpA + chrX 4343947 intron norpA + chrX 4344034 intron norpA + chrX_10_4340001 chrX_4340001 D17-c3 3020 chrX 4361412 4361418 chrX 4361514 4361520 4 102 6.0 7.5 6.8 0.5 108 chrX 4361412 intron norpA + chrX 4361466 intron norpA + chrX 4361520 intron norpA + chrX_4_4360001 chrX_4360001 D17-c3 3021 chrX 4361421 4361455 chrX 4361509 4361557 17 99 3.5 6.5 5.0 2.8 136 chrX 4361421 intron norpA + chrX 4361489 intron norpA + chrX 4361557 intron norpA + chrX_17_4360001 chrX_4360001 D17-c3 3022 chrX 4396950 4397008 chrX 4397060 4397118 22 110 7.5 8.0 7.8 2.5 168 chrX 4396950 intron CR32773 - chrX 4397034 intron CR32773 - chrX 4397118 intron CR32773 - chrX_22_4395001 chrX_4395001 D17-c3 3023 chrX 4787060 4787093 chrX 4787181 4787203 7 121 5.5 5.0 5.2 1.1 143 chrX 4787060 intergenic not near genes chrX 4787132 intergenic not near genes chrX 4787203 intergenic not near genes chrX_7_4785001 chrX_4785001 D17-c3 3024 chrX 4792355 4792396 chrX 4792813 4792854 jockey 14 458 8.0 8.0 8.0 1.6 499 chrX 4792355 intergenic not near genes chrX 4792604 intergenic not near genes chrX 4792854 intergenic not near genes chrX_14_4790001 chrX_4790001 D17-c3 3025 chrX 4815024 4815036 chrX 4815154 4815166 4 130 0.0 7.5 3.8 0.8 142 chrX 4815024 intergenic not near genes chrX 4815095 intergenic not near genes chrX 4815166 intergenic not near genes chrX_4_4815001 chrX_4815001 D17-c3 3026 chrX 4827954 4827983 chrX 4835350 4835379 Stalker4 8 7396 3.5 10.0 6.8 1.0 7425 chrX 4827954 intergenic not near genes chrX 4831666 intergenic not near genes chrX 4835379 intergenic not near genes chrX_8_4830001 chrX_4830001 D17-c3 3027 chrX 4827990 4827997 chrX 4835337 4835393 Stalker4 7 7379 0.5 8.5 4.5 1.3 7403 chrX 4827990 intergenic not near genes chrX 4831692 intergenic not near genes chrX 4835393 intergenic not near genes chrX_7_4830001 chrX_4830001 D17-c3 3028 chrX 4835606 4835657 chrX 4835792 4835846 6 188 3.0 5.0 4.0 1.2 240 chrX 4835606 intergenic not near genes chrX 4835726 intergenic not near genes chrX 4835846 intergenic not near genes chrX_6_4835001 chrX_4835001 D17-c3 3029 chrX 4864155 4864177 chrX 4864248 4864265 11 98 10.5 9.0 9.8 1.0 110 chrX 4864155 intron CG42594 + chrX 4864210 intron CG42594 + chrX 4864265 intron CG42594 + chrX_11_4860001 chrX_4860001 D17-c3 3030 chrX 4946555 4946602 chrX 4946659 4946706 26 104 7.0 9.0 8.0 2.9 151 chrX 4946555 intron Ptp4E + chrX 4946630 intron Ptp4E + chrX 4946706 intron Ptp4E + chrX_26_4945001 chrX_4945001 D17-c3 3031 chrX 4961823 4961867 chrX 4962050 4962094 10 227 4.0 6.0 5.0 1.7 271 chrX 4961823 intron CR44833 - chrX 4961958 intron CR44833 - chrX 4962094 intron CR44833 - chrX_10_4960001 chrX_4960001 D17-c3 3032 chrX 4990017 4990075 chrX 4997256 4997314 roo 13 7238 2.0 5.0 3.5 2.9 7297 chrX 4990017 intron CR44833 - chrX 4993666 intron CR44833 - chrX 4997314 intron CR44833 - chrX_13_4990001 chrX_4990001 D17-c3 3033 chrX 5049558 5049601 chrX 5049671 5049714 8 113 5.5 2.0 3.8 1.7 156 chrX 5049558 intron,intron CR44833 -,ovo + chrX 5049636 intron,intron CR44833 -,ovo + chrX 5049714 intron,intron CR44833 -,ovo + chrX_8_5045001 chrX_5045001 D17-c3 3034 chrX 5096249 5096268 chrX 5103839 5103858 springer 7 7586 16.0 28.5 22.2 0.3 7609 chrX 5096249 intron,intron CG15465 +,rg + chrX 5100054 intron,intron CG15465 +,rg + chrX 5103858 intron,intron CG15465 +,rg + chrX_7_5100001 chrX_5100001 D17-c3 3035 chrX 5096273 5096305 chrX 5103838 5103893 springer 11 7582 20.5 28.5 24.5 0.4 7620 chrX 5096273 intron,intron CG15465 +,rg + chrX 5100083 intron,intron CG15465 +,rg + chrX 5103893 intron,intron CG15465 +,rg + chrX_11_5100001 chrX_5100001 D17-c3 3036 chrX 5291484 5291507 chrX 5291592 5291615 8 106 10.5 4.0 7.2 1.0 131 chrX 5291484 intergenic not near genes chrX 5291550 intergenic not near genes chrX 5291615 intergenic not near genes chrX_8_5290001 chrX_5290001 D17-c3 3037 chrX 5323046 5323156 chrX 5323332 5323445 5 290 0.0 0.0 0.0 5.0 399 chrX 5323046 intergenic Rnp4F - chrX 5323246 intergenic not near genes chrX 5323445 intergenic Mcm3 + chrX_5_5320001 chrX_5320001 D17-c3 3038 chrX 5338699 5338735 chrX 5339972 5340008 jockey 7 1276 5.0 5.5 5.2 1.1 1309 chrX 5338699 intergenic not near genes chrX 5339354 intergenic not near genes chrX 5340008 intergenic SK + chrX_7_5335001 chrX_5335001 D17-c3 3039 chrX 5345423 5345464 chrX 5345560 5345601 12 137 5.5 4.5 5.0 2.0 178 chrX 5345423 intron SK + chrX 5345512 intron SK + chrX 5345601 intron SK + chrX_12_5345001 chrX_5345001 D17-c3 3040 chrX 5350308 5350315 chrX 5350412 5350419 10 104 14.5 17.0 15.8 0.6 111 chrX 5350308 intron SK + chrX 5350364 intron SK + chrX 5350419 intron SK + chrX_10_5350001 chrX_5350001 D17-c3 3041 chrX 5473566 5473618 chrX 5473662 5473719 11 95 3.5 6.0 4.8 1.9 153 chrX 5473566 intron SPR + chrX 5473642 intron SPR + chrX 5473719 intron SPR + chrX_11_5470001 chrX_5470001 D17-c3 3042 chrX 5509074 5509086 chrX 5509191 5509203 5 117 13.0 4.0 8.5 0.5 129 chrX 5509074 intergenic not near genes chrX 5509138 intergenic not near genes chrX 5509203 intergenic not near genes chrX_5_5505001 chrX_5505001 D17-c3 3043 chrX 5509097 5509128 chrX 5509188 5509245 6 109 4.0 3.5 3.8 1.2 148 chrX 5509097 intergenic not near genes chrX 5509171 intergenic not near genes chrX 5509245 intergenic not near genes chrX_6_5505001 chrX_5505001 D17-c3 3044 chrX 5512030 5512061 chrX 5512138 5512164 4 105 9.5 1.0 5.2 0.6 134 chrX 5512030 intergenic not near genes chrX 5512097 intergenic not near genes chrX 5512164 intergenic not near genes chrX_4_5510001 chrX_5510001 D17-c3 3045 chrX 5524818 5524853 chrX 5528702 5528741 412 5 3885 5.0 1.5 3.2 1.2 3923 chrX 5524818 intergenic snoRNA:Psi28S-3342 - chrX 5526780 intergenic not near genes chrX 5528741 intergenic Vsx2 - chrX_5_5525001 chrX_5525001 D17-c3 3046 chrX 5566773 5566785 chrX 5566868 5566891 9 103 7.5 9.5 8.5 0.9 118 chrX 5566773 intergenic not near genes chrX 5566832 intergenic not near genes chrX 5566891 intergenic not near genes chrX_9_5565001 chrX_5565001 D17-c3 3047 chrX 5727399 5727414 chrX 5732163 5732178 Doc 7 4764 7.5 5.5 6.5 0.9 4779 chrX 5727399 intron CG32758 - chrX 5729788 intron CG32758 - chrX 5732178 intron CG32758 - chrX_7_5725001 chrX_5725001 D17-c3 3048 chrX 6335190 6335243 chrX 6337726 6337778 Tirant 14 2533 0.5 4.5 2.5 4.0 2588 chrX 6335190 intergenic not near genes chrX 6336484 intergenic not near genes chrX 6337778 5` UTR CG3842 + chrX_14_6335001 chrX_6335001 D17-c3 3049 chrX 6388642 6388686 chrX 6388743 6388787 8 101 4.5 7.0 5.8 1.2 145 chrX 6388642 intergenic not near genes chrX 6388714 intergenic not near genes chrX 6388787 intergenic not near genes chrX_8_6385001 chrX_6385001 D17-c3 3050 chrX 6425003 6425055 chrX 6425536 6425587 28 534 55.5 61.5 58.5 0.5 584 chrX 6425003 intron CG42340 - chrX 6425295 intron CG42340 - chrX 6425587 intron CG42340 - chrX_28_6425001 chrX_6425001 D17-c3 3051 chrX 6429980 6429992 chrX 6435478 6435490 Rt1c 9 5497 10.5 19.5 15.0 0.6 5510 chrX 6429980 intron CG42340 - chrX 6432735 intron CG42340 - chrX 6435490 intron CG42340 - chrX_9_6430001 chrX_6430001 D17-c3 3052 chrX 6562796 6562848 chrX 6571303 6571355 Tirant 33 8506 9.0 14.5 11.8 2.6 8559 chrX 6562796 intron CG34417 + chrX 6567076 intron CG34417 + chrX 6571355 intron CG34417 + chrX_33_6565001 chrX_6565001 D17-c3 3053 chrX 6591829 6591873 chrX 6591939 6591983 10 110 8.0 1.5 4.8 1.7 154 chrX 6591829 intron Pat1 + chrX 6591906 intron Pat1 + chrX 6591983 intron Pat1 + chrX_10_6590001 chrX_6590001 D17-c3 3054 chrX 6592038 6592085 chrX 6592259 6592306 22 221 4.5 6.0 5.2 3.5 268 chrX 6592038 intron Pat1 + chrX 6592172 intron Pat1 + chrX 6592306 intron Pat1 + chrX_22_6590001 chrX_6590001 D17-c3 3055 chrX 6605470 6605505 chrX 6608517 6608552 Burdock 9 3047 2.0 10.5 6.2 1.2 3082 chrX 6605470 intron pigs + chrX 6607011 intron pigs + chrX 6608552 intron pigs + chrX_9_6605001 chrX_6605001 D17-c3 3056 chrX 6780117 6780166 chrX 6780240 6780289 9 119 7.0 0.0 3.5 2.0 172 chrX 6780117 intergenic shf - chrX 6780203 intergenic not near genes chrX 6780289 intergenic C3G - chrX_9_6780001 chrX_6780001 D17-c3 3057 chrX 6792059 6792092 chrX 6792175 6792208 12 116 8.0 3.0 5.5 1.8 149 chrX 6792059 intron C3G - chrX 6792134 intron C3G - chrX 6792208 intron C3G - chrX_12_6790001 chrX_6790001 D17-c3 3058 chrX 6814253 6814265 chrX 6814365 6814377 8 112 5.0 0.0 2.5 2.3 124 chrX 6814253 exon iav + chrX 6814315 intron iav + chrX 6814377 intron iav + chrX_8_6810001 chrX_6810001 D17-c3 3059 chrX 6859537 6859559 chrX 6859975 6859992 5 437 18.0 3.5 10.8 0.4 455 chrX 6859537 intron CG14434 - chrX 6859764 intron CG14434 - chrX 6859992 intron CG14434 - chrX_5_6855001 chrX_6855001 D17-c3 3060 chrX 6896194 6896224 chrX 6896300 6896330 16 102 6.5 14.5 10.5 1.4 136 chrX 6896194 intergenic not near genes chrX 6896262 intergenic not near genes chrX 6896330 intergenic not near genes chrX_16_6895001 chrX_6895001 D17-c3 3061 chrX 6897579 6897711 chrX 6897682 6897846 21 127 0.0 0.0 0.0 21.0 267 chrX 6897579 intergenic not near genes chrX 6897712 intergenic not near genes chrX 6897846 intergenic not near genes chrX_21_6895001 chrX_6895001 D17-c3 3062 chrX 6901354 6901385 chrX 6901454 6901471 9 98 6.5 9.0 7.8 1.0 117 chrX 6901354 intergenic not near genes chrX 6901412 intergenic not near genes chrX 6901471 intergenic not near genes chrX_9_6900001 chrX_6900001 D17-c3 3063 chrX 6984596 6984652 chrX 6984698 6984754 14 102 3.0 6.0 4.5 2.5 158 chrX 6984596 intron ogre - chrX 6984675 intron ogre - chrX 6984754 intron ogre - chrX_14_6980001 chrX_6980001 D17-c3 3064 chrX 6989477 6989532 chrX 6989589 6989644 23 112 3.5 8.5 6.0 3.3 167 chrX 6989477 intron ogre - chrX 6989560 intron ogre - chrX 6989644 intron ogre - chrX_23_6985001 chrX_6985001 D17-c3 3065 chrX 7023578 7023631 chrX 7030993 7031046 Tabor 20 7414 7.0 7.0 7.0 2.5 7468 chrX 7023578 intron CG12541 - chrX 7027312 intron CG12541 - chrX 7031046 intron CG12541 - chrX_20_7025001 chrX_7025001 D17-c3 3066 chrX 7067908 7067920 chrX 13592493 13592494 5 6524582 7.5 9.0 8.2 0.5 6524586 chrX 7067908 intergenic not near genes chrX 10330201 3` UTR CG15306 - chrX 13592494 3` UTR Tango13 + chrX_5_10330001 chrX_10330001 D17-c3 3067 chrX 7125228 7125270 chrX 7134406 7134454 roo 15 9183 1.0 2.0 1.5 6.0 9226 chrX 7125228 intergenic not near genes chrX 7129841 intergenic not near genes chrX 7134454 intergenic not near genes chrX_15_7125001 chrX_7125001 D17-c3 3068 chrX 7294490 7294516 chrX 7294613 7294639 21 120 13.0 8.5 10.8 1.8 149 chrX 7294490 intron,intron CR44357 -,CG1677 - chrX 7294564 intron,intron CR44357 -,CG1677 - chrX 7294639 intron,intron CR44357 -,CG1677 - chrX_21_7290001 chrX_7290001 D17-c3 3069 chrX 7294519 7294541 chrX 7294612 7294639 16 114 8.0 7.5 7.8 1.8 120 chrX 7294519 intron,intron CR44357 -,CG1677 - chrX 7294579 intron,intron CR44357 -,CG1677 - chrX 7294639 intron,intron CR44357 -,CG1677 - chrX_16_7290001 chrX_7290001 D17-c3 3070 chrX 7399192 7399238 chrX 7399304 7399350 23 112 4.0 7.0 5.5 3.5 158 chrX 7399192 intron,intron CR44357 -,CG1677 - chrX 7399271 intron,intron CR44357 -,CG1677 - chrX 7399350 intron,intron CR44357 -,CG1677 - chrX_23_7395001 chrX_7395001 D17-c3 3071 chrX 7470201 7470224 chrX 7470314 7470337 11 113 7.0 6.0 6.5 1.5 136 chrX 7470201 intergenic not near genes chrX 7470269 intergenic not near genes chrX 7470337 intergenic not near genes chrX_11_7470001 chrX_7470001 D17-c3 3072 chrX 7707215 7707265 chrX 7707470 7707520 23 255 4.5 5.0 4.8 4.0 305 chrX 7707215 intron CHES-1-like - chrX 7707368 intron CHES-1-like - chrX 7707520 intron CHES-1-like - chrX_23_7705001 chrX_7705001 D17-c3 3073 chrX 7739688 7739740 chrX 7739809 7739861 17 121 0.5 2.0 1.2 7.7 173 chrX 7739688 3` UTR Tom40 + chrX 7739774 3` UTR Tom40 + chrX 7739861 3` UTR Tom40 + chrX_17_7735001 chrX_7735001 D17-c3 3074 chrX 8015208 8015236 chrX 8015319 8015347 9 111 6.0 8.0 7.0 1.1 139 chrX 8015208 intron Tbh + chrX 8015278 intron Tbh + chrX 8015347 intron Tbh + chrX_9_8015001 chrX_8015001 D17-c3 3075 chrX 8024643 8024672 chrX 8024734 8024737 4 88 14.5 4.5 9.5 0.4 94 chrX 8024643 intron Tbh + chrX 8024690 intron Tbh + chrX 8024737 intron Tbh + chrX_4_8020001 chrX_8020001 D17-c3 3076 chrX 8031404 8031452 chrX 8035738 8035786 Juan 26 4334 13.5 9.0 11.2 2.1 4382 chrX 8031404 intergenic not near genes chrX 8033595 intergenic not near genes chrX 8035786 3` UTR CG2233 - chrX_26_8030001 chrX_8030001 D17-c3 3077 chrX 8364825 8364880 chrX 8365247 8365319 BS 13 432 7.0 0.5 3.8 2.7 494 chrX 8364825 intron nAChRalpha3 - chrX 8365072 intron nAChRalpha3 - chrX 8365319 intron nAChRalpha3 - chrX_13_8365001 chrX_8365001 D17-c3 3078 chrX 8371147 8371179 chrX 8371314 8371358 7 173 13.0 4.0 8.5 0.7 211 chrX 8371147 intergenic not near genes chrX 8371252 intergenic not near genes chrX 8371358 intergenic not near genes chrX_7_8370001 chrX_8370001 D17-c3 3079 chrX 8421464 8421478 chrX 8421581 8421595 8 117 10.0 14.0 12.0 0.6 131 chrX 8421464 intron Trf2 + chrX 8421530 intron Trf2 + chrX 8421595 intron Trf2 + chrX_8_8420001 chrX_8420001 D17-c3 3080 chrX 8621971 8622013 chrX 8622086 8622128 9 115 6.0 3.5 4.8 1.6 157 chrX 8621971 intergenic not near genes chrX 8622050 intergenic not near genes chrX 8622128 intergenic not near genes chrX_9_8620001 chrX_8620001 D17-c3 3081 chrX 3291959 3291983 chrX 8759616 8759616 4 5467646 17.0 11.0 14.0 0.3 5467657 chrX 3291959 intron dnc + chrX 6025788 intergenic not near genes chrX 8759616 intron Lim1 - chrX_4_6025001 chrX_6025001 D17-c3 3082 chrX 8772223 8772249 chrX 8772327 8772353 14 104 17.5 16.0 16.8 0.8 130 chrX 8772223 intron Lim1 - chrX 8772288 intron Lim1 - chrX 8772353 intron Lim1 - chrX_14_8770001 chrX_8770001 D17-c3 3083 chrX 8803217 8803266 chrX 8803599 8803648 13 381 4.0 3.0 3.5 2.9 431 chrX 8803217 intron Lim1 - chrX 8803432 intron Lim1 - chrX 8803648 intron Lim1 - chrX_13_8800001 chrX_8800001 D17-c3 3084 chrX 8922306 8922357 chrX 8922765 8922816 jockey 28 457 8.0 8.0 8.0 3.1 510 chrX 8922306 intron rdgA + chrX 8922561 intron rdgA + chrX 8922816 intron rdgA + chrX_28_8920001 chrX_8920001 D17-c3 3085 chrX 8927562 8927611 chrX 8929857 8929906 NOF 20 2294 7.5 12.5 10.0 1.8 2344 chrX 8927562 intron rdgA + chrX 8928734 intron rdgA + chrX 8929906 intron rdgA + chrX_20_8925001 chrX_8925001 D17-c3 3086 chrX 8948735 8948789 chrX 8956270 8956324 roo 16 7535 2.0 4.0 3.0 4.0 7589 chrX 8948735 intron rdgA + chrX 8952530 intron rdgA + chrX 8956324 intron rdgA + chrX_16_8950001 chrX_8950001 D17-c3 3087 chrX 8959243 8959282 chrX 8959344 8959383 10 101 1.5 4.5 3.0 2.5 140 chrX 8959243 intron rdgA + chrX 8959313 intron rdgA + chrX 8959383 intron rdgA + chrX_10_8955001 chrX_8955001 D17-c3 3088 chrX 8971873 8971905 chrX 8971967 8972009 8 103 5.5 6.0 5.8 1.2 136 chrX 8971873 intron rdgA + chrX 8971941 intron rdgA + chrX 8972009 intron rdgA + chrX_8_8970001 chrX_8970001 D17-c3 3089 chrX 9016593 9016609 chrX 9016707 9016723 4 114 7.0 1.5 4.2 0.8 130 chrX 9016593 intron,intron rdgA +,CR43836 - chrX 9016658 intron,intron rdgA +,CR43836 - chrX 9016723 intron,intron rdgA +,CR43836 - chrX_4_9015001 chrX_9015001 D17-c3 3090 chrX 9218060 9218079 chrX 9218176 9218195 11 116 10.5 3.5 7.0 1.4 135 chrX 9218060 3` UTR t - chrX 9218128 3` UTR t - chrX 9218195 3` UTR t - chrX_11_9215001 chrX_9215001 D17-c3 3091 chrX 9229886 9229939 chrX 9229991 9230044 21 104 8.0 6.0 7.0 2.6 158 chrX 9229886 intron CG12121 - chrX 9229965 intron CG12121 - chrX 9230044 intron CG12121 - chrX_21_9225001 chrX_9225001 D17-c3 3092 chrX 9272992 9273043 chrX 9273098 9273149 15 106 5.0 4.0 4.5 2.7 157 chrX 9272992 intergenic Cfp1 -,CG16892 + chrX 9273070 intergenic Cfp1 -,CG16892 + chrX 9273149 intergenic Cfp1 -,CG16892 + chrX_15_9270001 chrX_9270001 D17-c3 3093 chrX 9337915 9337973 chrX 9338032 9338090 34 117 7.5 6.5 7.0 4.2 175 chrX 9337915 intron CG34449 - chrX 9338002 intron CG34449 - chrX 9338090 exon CG34449 - chrX_34_9335001 chrX_9335001 D17-c3 3094 chrX 9457816 9457843 chrX 9457918 9457945 9 102 4.0 4.5 4.2 1.7 129 chrX 9457816 intron mgl - chrX 9457880 intron mgl - chrX 9457945 intron mgl - chrX_9_9455001 chrX_9455001 D17-c3 3095 chrX 9508114 9508157 chrX 9509657 9509700 jockey 27 1543 9.0 9.0 9.0 2.7 1586 chrX 9508114 intron CG32700 - chrX 9508907 intron CG32700 - chrX 9509700 intron CG32700 - chrX_27_9505001 chrX_9505001 D17-c3 3096 chrX 9531630 9531672 chrX 9531735 9531777 20 105 6.5 0.0 3.2 4.8 147 chrX 9531630 intron CG32700 - chrX 9531704 intron CG32700 - chrX 9531777 intron CG32700 - chrX_20_9530001 chrX_9530001 D17-c3 3097 chrX 9543386 9543426 chrX 9543490 9543530 14 104 3.5 5.0 4.2 2.7 144 chrX 9543386 intron CG32700 - chrX 9543458 intron CG32700 - chrX 9543530 intron CG32700 - chrX_14_9540001 chrX_9540001 D17-c3 3098 chrX 9575767 9575821 chrX 9576116 9576170 mdg3 24 348 17.0 14.0 15.5 1.5 403 chrX 9575767 intron,exon CG32699 -,CG42395 - chrX 9575968 intron,intron CG32699 -,CG42395 - chrX 9576170 intron,5` UTR CG32699 -,CG42395 - chrX_24_9575001 chrX_9575001 D17-c3 3099 chrX 9635086 9635122 chrX 9635212 9635248 18 126 11.0 9.5 10.2 1.6 162 chrX 9635086 intron l(1)G0232 - chrX 9635167 intron l(1)G0232 - chrX 9635248 intron l(1)G0232 - chrX_18_9635001 chrX_9635001 D17-c3 3100 chrX 9758033 9758068 chrX 9758143 9758178 8 109 5.0 0.0 2.5 2.3 145 chrX 9758033 intergenic not near genes chrX 9758106 intergenic not near genes chrX 9758178 intergenic not near genes chrX_8_9755001 chrX_9755001 D17-c3 3101 chrX 9784148 9784168 chrX 9784361 9784381 6 213 16.5 4.0 10.2 0.5 233 chrX 9784148 intron CG32698 + chrX 9784264 intron CG32698 + chrX 9784381 intron CG32698 + chrX_6_9780001 chrX_9780001 D17-c3 3102 chrX 9784171 9784205 chrX 9784359 9784418 18 211 5.5 4.0 4.8 3.1 247 chrX 9784171 intron CG32698 + chrX 9784294 intron CG32698 + chrX 9784418 intron CG32698 + chrX_18_9780001 chrX_9780001 D17-c3 3103 chrX 9791851 9791888 chrX 9791970 9792010 24 121 4.0 14.0 9.0 2.4 159 chrX 9791851 intron CG32698 + chrX 9791930 intron CG32698 + chrX 9792010 intron CG32698 + chrX_24_9790001 chrX_9790001 D17-c3 3104 chrX 9839322 9839367 chrX 9839430 9839474 6 108 0.0 9.0 4.5 1.1 152 chrX 9839322 intron CG32698 + chrX 9839398 intron CG32698 + chrX 9839474 intron CG32698 + chrX_6_9835001 chrX_9835001 D17-c3 3105 chrX 9842430 9842480 chrX 9843037 9843087 38 609 86.5 68.0 77.2 0.5 657 chrX 9842430 intron CG32698 + chrX 9842758 intron CG32698 + chrX 9843087 intron CG32698 + chrX_38_9840001 chrX_9840001 D17-c3 3106 chrX 9923365 9923420 chrX 9923481 9923528 33 111 6.5 7.5 7.0 4.1 163 chrX 9923365 intergenic not near genes chrX 9923446 intergenic not near genes chrX 9923528 intergenic not near genes chrX_33_9920001 chrX_9920001 D17-c3 3107 chrX 10138193 10138244 chrX 10145722 10145773 412 11 7529 7.5 3.0 5.2 1.8 7580 chrX 10138193 intron,intron RhoU +,CR44894 - chrX 10141983 intron,intron RhoU +,CR44894 - chrX 10145773 intron,intron RhoU +,CR44894 - chrX_11_10140001 chrX_10140001 D17-c3 3108 chrX 10151918 10151935 chrX 10152020 10152037 6 102 6.5 10.0 8.2 0.7 119 chrX 10151918 intron CR44894 - chrX 10151978 intron CR44894 - chrX 10152037 intron CR44894 - chrX_6_10150001 chrX_10150001 D17-c3 3109 chrX 10216820 10216850 chrX 10216926 10216956 17 104 12.5 10.5 11.5 1.4 136 chrX 10216820 3` UTR l(1)G0230 + chrX 10216888 3` UTR l(1)G0230 + chrX 10216956 3` UTR l(1)G0230 + chrX_17_10215001 chrX_10215001 D17-c3 3110 chrX 10223653 10223699 chrX 10223797 10223843 25 144 8.0 9.5 8.8 2.6 190 chrX 10223653 intron CG34408 + chrX 10223748 intron CG34408 + chrX 10223843 intron CG34408 + chrX_25_10220001 chrX_10220001 D17-c3 3111 chrX 10233132 10233158 chrX 10233238 10233263 8 106 14.5 6.5 10.5 0.7 131 chrX 10233132 intergenic Ipod - chrX 10233198 intergenic Ipod - chrX 10233263 intergenic Ipod - chrX_8_10230001 chrX_10230001 D17-c3 3112 chrX 10267295 10267326 chrX 10276470 10276501 roo 6 9175 0.0 3.0 1.5 2.4 9206 chrX 10267295 3` UTR alpha-Man-I - chrX 10271898 intron alpha-Man-I - chrX 10276501 3` UTR alpha-Man-I - chrX_6_10270001 chrX_10270001 D17-c3 3113 chrX 10314916 10314950 chrX 10315047 10315080 10 129 6.5 3.5 5.0 1.7 164 chrX 10314916 intron alpha-Man-I - chrX 10314998 intron alpha-Man-I - chrX 10315080 intron alpha-Man-I - chrX_10_10310001 chrX_10310001 D17-c3 3114 chrX 10317538 10317573 chrX 10317641 10317676 15 103 0.0 2.5 1.2 6.8 138 chrX 10317538 intron alpha-Man-I - chrX 10317607 intron alpha-Man-I - chrX 10317676 intron alpha-Man-I - chrX_15_10315001 chrX_10315001 D17-c3 3115 chrX 10330666 10330670 chrX 10330858 10330893 5 206 12.0 21.0 16.5 0.3 227 chrX 10330666 exon CG15306 - chrX 10330780 exon CG15306 - chrX 10330893 exon CG15306 - chrX_5_10330001 chrX_10330001 D17-c3 3116 chrX 10348791 10348822 chrX 10356376 10356382 springer 10 7575 31.5 6.0 18.8 0.5 7591 chrX 10348791 intergenic snoRNA:U3:9B + chrX 10352586 intergenic not near genes chrX 10356382 intergenic l(1)G0289 - chrX_10_10350001 chrX_10350001 D17-c3 3117 chrX 10550307 10550366 chrX 10550410 10550469 21 102 5.5 1.5 3.5 4.7 162 chrX 10550307 intron spri - chrX 10550388 intron spri - chrX 10550469 intron spri - chrX_21_10550001 chrX_10550001 D17-c3 3118 chrX 10550835 10550837 chrX 10552327 10552329 hobo 4 1492 8.0 8.5 8.2 0.4 1494 chrX 10550835 intron spri - chrX 10551582 intron spri - chrX 10552329 intron spri - chrX_4_10550001 chrX_10550001 D17-c3 3119 chrX 10550840 10550852 chrX 10552326 10552344 hobo 8 1491 6.0 8.0 7.0 1.0 1504 chrX 10550840 intron spri - chrX 10551592 intron spri - chrX 10552344 intron spri - chrX_8_10550001 chrX_10550001 D17-c3 3120 chrX 10550853 10550885 chrX 10552325 10552371 hobo 13 1490 4.0 8.0 6.0 1.9 1518 chrX 10550853 intron spri - chrX 10551612 intron spri - chrX 10552371 intron spri - chrX_13_10550001 chrX_10550001 D17-c3 3121 chrX 10651625 10651642 chrX 10651766 10651783 5 141 0.5 7.0 3.8 1.0 158 chrX 10651625 intron X11Lbeta + chrX 10651704 intron X11Lbeta + chrX 10651783 intron X11Lbeta + chrX_5_10650001 chrX_10650001 D17-c3 3122 chrX 10686028 10686083 chrX 10691190 10691234 roo 22 5161 4.0 7.5 5.8 3.2 5206 chrX 10686028 intron X11Lbeta + chrX 10688631 intron X11Lbeta + chrX 10691234 intron X11Lbeta + chrX_22_10685001 chrX_10685001 D17-c3 3123 chrX 10694131 10694162 chrX 10694236 10694256 15 103 13.0 9.5 11.2 1.2 125 chrX 10694131 intron X11Lbeta + chrX 10694194 intron X11Lbeta + chrX 10694256 intron X11Lbeta + chrX_15_10690001 chrX_10690001 D17-c3 3124 chrX 10719078 10719137 chrX 10719198 10719246 9 110 0.0 3.5 1.8 3.2 168 chrX 10719078 intron CG32676 - chrX 10719162 intron CG32676 - chrX 10719246 intron CG32676 - chrX_9_10715001 chrX_10715001 D17-c3 3125 chrX 10731227 10731273 chrX 10731339 10731386 17 113 3.0 4.0 3.5 3.8 159 chrX 10731227 intron CG32676 - chrX 10731306 intron CG32676 - chrX 10731386 intron CG32676 - chrX_17_10730001 chrX_10730001 D17-c3 3126 chrX 10772649 10772698 chrX 10772757 10772806 Tirant 43 106 11.5 9.0 10.2 3.8 157 chrX 10772649 intron CG15211 + chrX 10772728 intron CG15211 + chrX 10772806 intron CG15211 + chrX_43_10770001 chrX_10770001 D17-c3 3127 chrX 10933906 10933943 chrX 10934019 10934056 12 113 0.5 9.5 5.0 2.0 150 chrX 10933906 intron Myo10A + chrX 10933981 intron Myo10A + chrX 10934056 intron Myo10A + chrX_12_10930001 chrX_10930001 D17-c3 3128 chrX 10960216 10960236 chrX 10960355 10960375 4 139 3.0 4.0 3.5 0.9 159 chrX 10960216 intron Myo10A + chrX 10960296 intron Myo10A + chrX 10960375 intron Myo10A + chrX_4_10960001 chrX_10960001 D17-c3 3129 chrX 10970801 10970840 chrX 10970920 10970968 9 128 4.0 1.5 2.8 2.4 167 chrX 10970801 intron CG42339 - chrX 10970884 intron CG42339 - chrX 10970968 intron CG42339 - chrX_9_10970001 chrX_10970001 D17-c3 3130 chrX 11081651 11081707 chrX 11082604 11082659 25 952 4.5 6.0 5.2 4.0 1008 chrX 11081651 intron sev - chrX 11082155 intron sev - chrX 11082659 intron sev - chrX_25_11080001 chrX_11080001 D17-c3 3131 chrX 11095978 11096023 chrX 11103105 11103149 HMS-Beagle 11 7127 5.5 9.0 7.2 1.3 7171 chrX 11095978 intergenic not near genes chrX 11099564 intergenic not near genes chrX 11103149 intron CG42249 + chrX_11_11095001 chrX_11095001 D17-c3 3132 chrX 11141991 11142069 chrX 11142092 11142170 17 100 0.0 0.0 0.0 17.0 179 chrX 11141991 intergenic CG15199 - chrX 11142080 intergenic CG15199 -,CG15202 + chrX 11142170 intergenic CG15199 -,CG15202 + chrX_17_11140001 chrX_11140001 D17-c3 3133 chrX 11184224 11184258 chrX 11189328 11189362 flea 13 5104 16.0 5.0 10.5 1.1 5138 chrX 11184224 intergenic not near genes chrX 11186793 intergenic not near genes chrX 11189362 intergenic not near genes chrX_13_11185001 chrX_11185001 D17-c3 3134 chrX 11190748 11190793 chrX 11190896 11190941 17 148 1.0 5.0 3.0 4.2 193 chrX 11190748 intergenic not near genes chrX 11190844 intergenic not near genes chrX 11190941 intergenic not near genes chrX_17_11190001 chrX_11190001 D17-c3 3135 chrX 11205268 11205321 chrX 11205369 11205422 14 101 2.5 3.0 2.8 3.7 154 chrX 11205268 intergenic not near genes chrX 11205345 intergenic not near genes chrX 11205422 intergenic not near genes chrX_14_11205001 chrX_11205001 D17-c3 3136 chrX 11214965 11215008 chrX 11215352 11215396 17 387 6.0 9.0 7.5 2.0 431 chrX 11214965 intergenic not near genes chrX 11215180 intergenic not near genes chrX 11215396 intergenic not near genes chrX_17_11215001 chrX_11215001 D17-c3 3137 chrX 11268537 11268596 chrX 11270055 11270102 hopper2 30 1516 3.0 7.5 5.2 4.8 1565 chrX 11268537 intron CG44422 - chrX 11269320 intron CG44422 - chrX 11270102 intron CG44422 - chrX_30_11265001 chrX_11265001 D17-c3 3138 chrX 11297693 11297729 chrX 11297817 11297845 18 124 7.0 10.5 8.8 1.8 152 chrX 11297693 intron CG44422 - chrX 11297769 intron CG44422 - chrX 11297845 exon CG44422 - chrX_18_11295001 chrX_11295001 D17-c3 3139 chrX 11312036 11312093 chrX 11319414 11319436 Stalker2 11 7370 2.0 7.0 4.5 2.0 7400 chrX 11312036 intergenic not near genes chrX 11315736 intergenic not near genes chrX 11319436 intergenic not near genes chrX_11_11315001 chrX_11315001 D17-c3 3140 chrX 11327173 11327226 chrX 11327274 11327327 10 101 4.0 4.5 4.2 1.9 154 chrX 11327173 intron CG1657 + chrX 11327250 intron CG1657 + chrX 11327327 intron CG1657 + chrX_10_11325001 chrX_11325001 D17-c3 3141 chrX 11379741 11379792 chrX 11379911 11379962 13 169 4.0 5.5 4.8 2.2 221 chrX 11379741 intron dlg1 + chrX 11379852 intron dlg1 + chrX 11379962 intron dlg1 + chrX_13_11375001 chrX_11375001 D17-c3 3142 chrX 11499089 11499137 chrX 11499192 11499240 12 102 4.5 5.0 4.8 2.1 151 chrX 11499089 intron Drak + chrX 11499164 intron Drak + chrX 11499240 intron Drak + chrX_12_11495001 chrX_11495001 D17-c3 3143 chrX 11535019 11535045 chrX 11541514 11541540 Burdock 13 6495 10.5 3.5 7.0 1.6 6521 chrX 11535019 intron Drak + chrX 11538280 intron Drak + chrX 11541540 intron Drak + chrX_13_11535001 chrX_11535001 D17-c3 3144 chrX 11633404 11633446 chrX 11640483 11640525 297 15 7079 3.5 8.5 6.0 2.1 7121 chrX 11633404 intron Ptp10D + chrX 11636964 intron Ptp10D + chrX 11640525 intron Ptp10D + chrX_15_11635001 chrX_11635001 D17-c3 3145 chrX 11761985 11761999 chrX 11762089 11762103 7 104 5.0 8.0 6.5 0.9 118 chrX 11761985 intron m + chrX 11762044 intron m + chrX 11762103 intron m + chrX_7_11760001 chrX_11760001 D17-c3 3146 chrX 11798998 11799029 chrX 11799109 11799140 5 111 3.0 5.5 4.2 1.0 142 chrX 11798998 intron CkIIbeta + chrX 11799069 intron CkIIbeta + chrX 11799140 intron CkIIbeta + chrX_5_11795001 chrX_11795001 D17-c3 3147 chrX 11804650 11804687 chrX 11804779 11804816 6 129 2.5 1.5 2.0 2.0 166 chrX 11804650 intron Hsc70-3 - chrX 11804733 intron Hsc70-3 - chrX 11804816 intron Hsc70-3 - chrX_6_11800001 chrX_11800001 D17-c3 3148 chrX 11922343 11922374 chrX 11922501 11922532 11 158 4.0 5.5 4.8 1.9 189 chrX 11922343 exon Sclp - chrX 11922438 intron Sclp - chrX 11922532 intron Sclp - chrX_11_11920001 chrX_11920001 D17-c3 3149 chrX 11945043 11945085 chrX 11945171 11945213 7 128 1.5 2.0 1.8 2.5 170 chrX 11945043 intron cac - chrX 11945128 intron cac - chrX 11945213 intron cac - chrX_7_11945001 chrX_11945001 D17-c3 3150 chrX 12094028 12094057 chrX 12094145 12094174 4 116 1.5 7.0 4.2 0.8 146 chrX 12094028 intron,intron CR43960 +,Ten-a + chrX 12094101 intron,intron CR43960 +,Ten-a + chrX 12094174 intron,intron CR43960 +,Ten-a + chrX_4_12090001 chrX_12090001 D17-c3 3151 chrX 12168116 12168152 chrX 12173583 12173619 I-element 10 5467 3.5 3.0 3.2 2.4 5503 chrX 12168116 intron Ten-a + chrX 12170868 intron Ten-a + chrX 12173619 intron Ten-a + chrX_10_12170001 chrX_12170001 D17-c3 3152 chrX 12184258 12184281 chrX 12184370 12184391 7 110 4.5 11.5 8.0 0.8 133 chrX 12184258 intron Ten-a + chrX 12184324 intron Ten-a + chrX 12184391 intron Ten-a + chrX_7_12180001 chrX_12180001 D17-c3 3153 chrX 12277157 12277212 chrX 12277273 12277329 6 116 1.0 1.5 1.2 2.7 172 chrX 12277157 intron Ten-a + chrX 12277243 intron Ten-a + chrX 12277329 intron Ten-a + chrX_6_12275001 chrX_12275001 D17-c3 3154 chrX 12282968 12282986 chrX 12283087 12283112 7 125 6.0 3.0 4.5 1.3 144 chrX 12282968 intron Ten-a + chrX 12283040 intron Ten-a + chrX 12283112 intron Ten-a + chrX_7_12280001 chrX_12280001 D17-c3 3155 chrX 12295300 12295327 chrX 12295401 12295428 10 101 3.5 6.5 5.0 1.7 128 chrX 12295300 exon Ten-a + chrX 12295364 intron Ten-a + chrX 12295428 intron Ten-a + chrX_10_12295001 chrX_12295001 D17-c3 3156 chrX 12381868 12381899 chrX 12385795 12385826 flea 4 3927 2.0 5.5 3.8 0.8 3958 chrX 12381868 intergenic not near genes chrX 12383847 intergenic not near genes chrX 12385826 intergenic not near genes chrX_4_12380001 chrX_12380001 D17-c3 3157 chrX 12430929 12430962 chrX 12431026 12431065 10 101 6.5 1.0 3.8 2.1 136 chrX 12430929 intergenic not near genes chrX 12430997 intergenic not near genes chrX 12431065 intergenic not near genes chrX_10_12430001 chrX_12430001 D17-c3 3158 chrX 12440394 12440402 chrX 12440501 12440509 4 107 1.0 5.0 3.0 1.0 115 chrX 12440394 intron Pkcdelta + chrX 12440452 intron Pkcdelta + chrX 12440509 intron Pkcdelta + chrX_4_12440001 chrX_12440001 D17-c3 3159 chrX 12511328 12511351 chrX 12511437 12511460 5 109 0.0 5.5 2.8 1.3 132 chrX 12511328 intron CG2556 + chrX 12511394 intron CG2556 + chrX 12511460 intron CG2556 + chrX_5_12510001 chrX_12510001 D17-c3 3160 chrX 12528119 12528133 chrX 12528225 12528239 7 106 2.5 5.5 4.0 1.4 120 chrX 12528119 intron CG43921 - chrX 12528179 intron CG43921 - chrX 12528239 intron CG43921 - chrX_7_12525001 chrX_12525001 D17-c3 3161 chrX 12537524 12537566 chrX 12537625 12537667 5 101 0.0 1.0 0.5 3.3 143 chrX 12537524 intron CG43921 - chrX 12537596 intron CG43921 - chrX 12537667 intron CG43921 - chrX_5_12535001 chrX_12535001 D17-c3 3162 chrX 9845361 9845361 chrX 12546496 12546496 gypsy5 5 2701135 41.5 16.5 29.0 0.2 2701135 chrX 9845361 intron CG32698 + chrX 11195928 intergenic not near genes chrX 12546496 intron CG43921 - chrX_5_11195001 chrX_11195001 D17-c3 3163 chrX 12557127 12557162 chrX 12557228 12557263 9 101 2.5 4.5 3.5 2.0 136 chrX 12557127 intron CG43921 - chrX 12557195 intron CG43921 - chrX 12557263 intron CG43921 - chrX_9_12555001 chrX_12555001 D17-c3 3164 chrX 12701196 12701214 chrX 12701268 12701313 4 91 2.5 1.0 1.8 1.4 117 chrX 12701196 intron Smr - chrX 12701254 intron Smr - chrX 12701313 intron Smr - chrX_4_12700001 chrX_12700001 D17-c3 3165 chrX 12752272 12752305 chrX 12752384 12752417 11 112 5.0 11.5 8.2 1.2 145 chrX 12752272 5` UTR CR44619 + chrX 12752344 5` UTR CR44619 + chrX 12752417 intron CR44619 + chrX_11_12750001 chrX_12750001 D17-c3 3166 chrX 12808477 12808479 chrX 12808593 12808595 4 116 12.0 7.5 9.8 0.4 118 chrX 12808477 intron Pde9 - chrX 12808536 intron Pde9 - chrX 12808595 intron Pde9 - chrX_4_12805001 chrX_12805001 D17-c3 3167 chrX 12953869 12953922 chrX 12954032 12954086 4 162 3.0 2.5 2.8 1.1 217 chrX 12953869 intron hec - chrX 12953978 intron hec - chrX 12954086 intron hec - chrX_4_12950001 chrX_12950001 D17-c3 3168 chrX 12971668 12971692 chrX 12971770 12971794 7 102 9.5 4.5 7.0 0.9 126 chrX 12971668 intron,exon CR43636 -,CG15721 + chrX 12971731 intron,exon CR43636 -,CG15721 + chrX 12971794 intron,exon CR43636 -,CG15721 + chrX_7_12970001 chrX_12970001 D17-c3 3169 chrX 12977043 12977059 chrX 12977144 12977160 4 101 1.0 8.0 4.5 0.7 117 chrX 12977043 intergenic not near genes chrX 12977102 intergenic not near genes chrX 12977160 intergenic not near genes chrX_4_12975001 chrX_12975001 D17-c3 3170 chrX 13146573 13146618 chrX 13146685 13146731 13 113 2.5 4.0 3.2 3.1 158 chrX 13146573 intron CG32645 + chrX 13146652 intron CG32645 + chrX 13146731 intron CG32645 + chrX_13_13145001 chrX_13145001 D17-c3 3171 chrX 13168557 13168570 chrX 13168683 13168694 5 124 2.5 5.5 4.0 1.0 137 chrX 13168557 intron CG34411 - chrX 13168626 intron CG34411 - chrX 13168694 intron CG34411 - chrX_5_13165001 chrX_13165001 D17-c3 3172 chrX 13238081 13238099 chrX 13238183 13238201 4 102 0.0 7.0 3.5 0.9 120 chrX 13238081 intron mew - chrX 13238141 intron mew - chrX 13238201 intron mew - chrX_4_13235001 chrX_13235001 D17-c3 3173 chrX 13340844 13340886 chrX 13340949 13340996 9 109 6.5 2.5 4.5 1.6 152 chrX 13340844 3` UTR CG15747 + chrX 13340920 3` UTR CG15747 + chrX 13340996 3` UTR CG15747 + chrX_9_13340001 chrX_13340001 D17-c3 3174 chrX 13354941 13354949 chrX 13355043 13355043 4 100 4.5 0.0 2.2 1.2 102 chrX 13354941 intergenic not near genes chrX 13354992 intergenic not near genes chrX 13355043 intergenic not near genes chrX_4_13350001 chrX_13350001 D17-c3 3175 chrX 13401460 13401511 chrX 13401837 13401888 jockey 4 377 2.0 1.5 1.8 1.4 428 chrX 13401460 intergenic CG1673 +,CG12725 - chrX 13401674 intergenic CG12725 -,CG1673 + chrX 13401888 3` UTR CG12725 - chrX_4_13400001 chrX_13400001 D17-c3 3176 chrX 13429444 13429487 chrX 13430618 13430661 jockey 9 1174 4.0 7.0 5.5 1.4 1217 chrX 13429444 intergenic not near genes chrX 13430052 intergenic not near genes chrX 13430661 intergenic not near genes chrX_9_13430001 chrX_13430001 D17-c3 3177 chrX 13443393 13443418 chrX 13443495 13443520 8 98 9.0 14.0 11.5 0.6 127 chrX 13443393 intergenic not near genes chrX 13443456 intergenic not near genes chrX 13443520 intergenic not near genes chrX_8_13440001 chrX_13440001 D17-c3 3178 chrX 13463632 13463659 chrX 13469234 13469261 mdg3 5 5602 8.0 5.5 6.8 0.6 5629 chrX 13463632 intron Neto + chrX 13466446 intron Neto + chrX 13469261 intron Neto + chrX_5_13465001 chrX_13465001 D17-c3 3179 chrX 13493171 13493220 chrX 13493274 13493323 14 103 1.0 3.0 2.0 4.7 152 chrX 13493171 intron Neto + chrX 13493247 intron Neto + chrX 13493323 intron Neto + chrX_14_13490001 chrX_13490001 D17-c3 3180 chrX 13530095 13530117 chrX 13534486 13534535 15 4394 21.0 35.5 28.2 0.5 4440 chrX 13530095 exon CG44428 - chrX 13532315 intergenic not near genes chrX 13534535 exon CG15756 + chrX_15_13530001 chrX_13530001 D17-c3 3181 chrX 13574922 13574932 chrX 13575038 13575048 4 116 9.5 11.0 10.2 0.4 126 chrX 13574922 intron Tango13 + chrX 13574985 intron Tango13 + chrX 13575048 intron Tango13 + chrX_4_13570001 chrX_13570001 D17-c3 3182 chrX 13577732 13577781 chrX 13577992 13578042 9 260 2.0 2.0 2.0 3.0 310 chrX 13577732 intron Tango13 + chrX 13577887 intron Tango13 + chrX 13578042 intron Tango13 + chrX_9_13575001 chrX_13575001 D17-c3 3183 chrX 13734073 13734108 chrX 13734194 13734229 18 121 7.0 5.5 6.2 2.5 156 chrX 13734073 intron g - chrX 13734151 intron g - chrX 13734229 intron g - chrX_18_13730001 chrX_13730001 D17-c3 3184 chrX 13739086 13739128 chrX 13739187 13739229 15 101 7.5 3.0 5.2 2.4 143 chrX 13739086 intron,3` UTR Grip91 -,CG11134 + chrX 13739158 intron,3` UTR Grip91 -,CG11134 + chrX 13739229 intron Grip91 - chrX_15_13735001 chrX_13735001 D17-c3 3185 chrX 13821449 13821476 chrX 13821551 13821578 10 102 3.5 4.5 4.0 2.0 129 chrX 13821449 intron Clic - chrX 13821514 intron Clic - chrX 13821578 intron Clic - chrX_10_13820001 chrX_13820001 D17-c3 3186 chrX 13937956 13937995 chrX 13941252 13941287 I-element 11 3294 1.0 2.0 1.5 4.4 3331 chrX 13937956 intron mamo - chrX 13939622 intron mamo - chrX 13941287 intron mamo - chrX_11_13935001 chrX_13935001 D17-c3 3187 chrX 14104998 14105051 chrX 14114174 14114227 roo 26 9176 5.0 3.0 4.0 5.2 9229 chrX 14104998 intergenic not near genes chrX 14109612 intergenic not near genes chrX 14114227 5` UTR CR44657 + chrX_26_14105001 chrX_14105001 D17-c3 3188 chrX 14131469 14131510 chrX 14131575 14131616 19 105 10.5 7.5 9.0 1.9 147 chrX 14131469 intergenic not near genes chrX 14131542 intergenic not near genes chrX 14131616 intergenic not near genes chrX_19_14130001 chrX_14130001 D17-c3 3189 chrX 14157572 14157596 chrX 14163254 14163271 297 7 5681 5.0 2.5 3.8 1.5 5699 chrX 14157572 intergenic not near genes chrX 14160422 intergenic not near genes chrX 14163271 intergenic not near genes chrX_7_14160001 chrX_14160001 D17-c3 3190 chrX 14181761 14181766 chrX 14181878 14181883 6 117 19.0 29.0 24.0 0.2 122 chrX 14181761 exon CG11584 + chrX 14181822 exon CG11584 + chrX 14181883 exon CG11584 + chrX_6_14180001 chrX_14180001 D17-c3 3191 chrX 14185281 14185282 chrX 14185364 14185435 4 124 6.0 2.5 4.2 0.8 154 chrX 14185281 exon CG32603 + chrX 14185358 exon CG32603 + chrX 14185435 exon CG32603 + chrX_4_14185001 chrX_14185001 D17-c3 3192 chrX 14214543 14214587 chrX 14214875 14214919 9 330 6.0 5.0 5.5 1.4 376 chrX 14214543 intron l(1)G0007 + chrX 14214731 intron l(1)G0007 + chrX 14214919 intron l(1)G0007 + chrX_9_14210001 chrX_14210001 D17-c3 3193 chrX 14220002 14220028 chrX 14220103 14220129 7 101 5.5 10.5 8.0 0.8 127 chrX 14220002 intron l(1)G0007 + chrX 14220066 intron l(1)G0007 + chrX 14220129 intron l(1)G0007 + chrX_7_14220001 chrX_14220001 D17-c3 3194 chrX 14296431 14296485 chrX 14296532 14296586 18 100 3.0 4.5 3.8 3.8 155 chrX 14296431 intergenic not near genes chrX 14296508 intergenic not near genes chrX 14296586 intergenic not near genes chrX_18_14295001 chrX_14295001 D17-c3 3195 chrX 14366519 14366543 chrX 14366624 14366648 7 104 4.5 5.0 4.8 1.2 129 chrX 14366519 intron dpr8 + chrX 14366584 intron dpr8 + chrX 14366648 intron dpr8 + chrX_7_14365001 chrX_14365001 D17-c3 3196 chrX 14416297 14416337 chrX 14421090 14421129 F-element 5 4789 2.0 4.5 3.2 1.2 4832 chrX 14416297 intron dpr8 + chrX 14418713 intron dpr8 + chrX 14421129 intron dpr8 + chrX_5_14415001 chrX_14415001 D17-c3 3197 chrX 14484854 14484996 chrX 14484960 14485110 12 111 0.0 0.0 0.0 12.0 256 chrX 14484854 intergenic not near genes chrX 14484982 intergenic not near genes chrX 14485110 intergenic not near genes chrX_12_14480001 chrX_14480001 D17-c3 3198 chrX 14597721 14597752 chrX 14597823 14597844 11 101 5.0 9.0 7.0 1.4 123 chrX 14597721 intron CG9413 - chrX 14597782 intron CG9413 - chrX 14597844 intron CG9413 - chrX_11_14595001 chrX_14595001 D17-c3 3199 chrX 14636440 14636489 chrX 14641906 14641955 I-element 14 5466 4.5 4.5 4.5 2.5 5515 chrX 14636440 intron NetA - chrX 14639198 intron NetA - chrX 14641955 intron NetA - chrX_14_14635001 chrX_14635001 D17-c3 3200 chrX 14714030 14714064 chrX 14714137 14714171 10 107 4.0 5.5 4.8 1.7 141 chrX 14714030 intron NetB - chrX 14714100 intron NetB - chrX 14714171 intron NetB - chrX_10_14710001 chrX_14710001 D17-c3 3201 chrX 14778022 14778049 chrX 14782842 14782871 Doc 8 4822 6.5 5.0 5.8 1.2 4849 chrX 14778022 intergenic CG5347 + chrX 14780446 intergenic not near genes chrX 14782871 intergenic Ag5r2 - chrX_8_14780001 chrX_14780001 D17-c3 3202 chrX 14818737 14818792 chrX 14823966 14824021 copia 17 5227 5.0 4.5 4.8 2.9 5284 chrX 14818737 intron rut - chrX 14821379 intron rut - chrX 14824021 intron rut - chrX_17_14820001 chrX_14820001 D17-c3 3203 chrX 14936839 14936884 chrX 14946121 14946166 roo 10 9282 3.5 0.5 2.0 3.3 9327 chrX 14936839 intron pdgy - chrX 14941502 intron pdgy - chrX 14946166 intron pdgy - chrX_10_14940001 chrX_14940001 D17-c3 3204 chrX 15190602 15190623 chrX 15190710 15190731 4 108 3.5 6.5 5.0 0.7 129 chrX 15190602 intergenic not near genes chrX 15190666 intergenic not near genes chrX 15190731 intergenic not near genes chrX_4_15190001 chrX_15190001 D17-c3 3205 chrX 15217259 15217309 chrX 15217368 15217402 21 101 3.0 9.0 6.0 3.0 143 chrX 15217259 intergenic not near genes chrX 15217330 intergenic not near genes chrX 15217402 intergenic not near genes chrX_21_15215001 chrX_15215001 D17-c3 3206 chrX 15248242 15248257 chrX 15248343 15248347 7 99 13.0 5.0 9.0 0.7 105 chrX 15248242 intergenic not near genes chrX 15248294 intergenic not near genes chrX 15248347 intergenic not near genes chrX_7_15245001 chrX_15245001 D17-c3 3207 chrX 15248259 15248296 chrX 15248339 15248389 12 96 6.0 4.5 5.2 1.9 130 chrX 15248259 intergenic not near genes chrX 15248324 intergenic not near genes chrX 15248389 intergenic not near genes chrX_12_15245001 chrX_15245001 D17-c3 3208 chrX 15268873 15268885 chrX 15268957 15268990 6 97 7.5 1.5 4.5 1.1 117 chrX 15268873 intergenic not near genes chrX 15268932 intergenic not near genes chrX 15268990 intergenic not near genes chrX_6_15265001 chrX_15265001 D17-c3 3209 chrX 15273697 15273732 chrX 15274879 15274916 1360 16 1190 6.5 13.0 9.8 1.5 1219 chrX 15273697 intergenic not near genes chrX 15274306 intergenic not near genes chrX 15274916 intergenic not near genes chrX_16_15270001 chrX_15270001 D17-c3 3210 chrX 15365775 15365816 chrX 15365880 15365922 18 106 5.5 1.0 3.2 4.3 147 chrX 15365775 intron acj6 - chrX 15365848 intron acj6 - chrX 15365922 intron acj6 - chrX_18_15365001 chrX_15365001 D17-c3 3211 chrX 15365818 15365824 chrX 15365879 15365930 7 100 5.0 1.0 3.0 1.8 112 chrX 15365818 intron acj6 - chrX 15365874 intron acj6 - chrX 15365930 intron acj6 - chrX_7_15365001 chrX_15365001 D17-c3 3212 chrX 15369810 15369854 chrX 15369918 15369962 8 108 4.0 8.0 6.0 1.1 152 chrX 15369810 intron acj6 - chrX 15369886 intron acj6 - chrX 15369962 intron acj6 - chrX_8_15365001 chrX_15365001 D17-c3 3213 chrX 15413035 15413075 chrX 15417357 15417402 Juan 20 4326 10.5 6.0 8.2 2.2 4367 chrX 15413035 intron Cngl - chrX 15415218 intron Cngl - chrX 15417402 intron Cngl - chrX_20_15415001 chrX_15415001 D17-c3 3214 chrX 15424150 15424189 chrX 15424373 15424412 6 223 3.5 5.5 4.5 1.1 262 chrX 15424150 intron Cngl - chrX 15424281 intron Cngl - chrX 15424412 intron Cngl - chrX_6_15420001 chrX_15420001 D17-c3 3215 chrX 15435689 15435705 chrX 15436147 15436163 rover 9 458 0.0 10.5 5.2 1.5 474 chrX 15435689 intron Cngl - chrX 15435926 intron Cngl - chrX 15436163 intron Cngl - chrX_9_15435001 chrX_15435001 D17-c3 3216 chrX 15536674 15536710 chrX 15536776 15536792 11 99 11.0 11.5 11.2 0.9 118 chrX 15536674 intron Ac13E - chrX 15536733 intron Ac13E - chrX 15536792 intron Ac13E - chrX_11_15535001 chrX_15535001 D17-c3 3217 chrX 15543269 15543294 chrX 15543352 15543401 7 93 5.0 10.0 7.5 0.8 132 chrX 15543269 intron Ac13E - chrX 15543335 intron Ac13E - chrX 15543401 intron Ac13E - chrX_7_15540001 chrX_15540001 D17-c3 3218 chrX 15589432 15589449 chrX 15589636 15589653 5 204 7.5 10.5 9.0 0.5 221 chrX 15589432 intron CG9220 - chrX 15589542 intron CG9220 - chrX 15589653 exon CG9220 - chrX_5_15585001 chrX_15585001 D17-c3 3219 chrX 15591300 15591353 chrX 15591571 15591624 18 271 39.5 42.5 41.0 0.4 324 chrX 15591300 intron CG9220 - chrX 15591462 intron CG9220 - chrX 15591624 intron CG9220 - chrX_18_15590001 chrX_15590001 D17-c3 3220 chrX 15681385 15681406 chrX 15681492 15681513 4 107 2.5 4.0 3.2 1.0 128 chrX 15681385 intergenic not near genes chrX 15681449 intergenic not near genes chrX 15681513 intergenic not near genes chrX_4_15680001 chrX_15680001 D17-c3 3221 chrX 15893183 15893236 chrX 15893355 15893403 26 169 7.0 3.5 5.2 4.2 220 chrX 15893183 intron shi + chrX 15893293 intron shi + chrX 15893403 intron shi + chrX_26_15890001 chrX_15890001 D17-c3 3222 chrX 16004387 16004437 chrX 16004498 16004548 17 111 5.0 8.0 6.5 2.3 161 chrX 16004387 intron vap - chrX 16004468 intron vap - chrX 16004548 intron vap - chrX_17_16000001 chrX_16000001 D17-c3 3223 chrX 16124319 16124329 chrX 16124422 16124427 4 102 13.0 15.5 14.2 0.3 108 chrX 16124319 intron disco-r - chrX 16124373 intron disco-r - chrX 16124427 intron disco-r - chrX_4_16120001 chrX_16120001 D17-c3 3224 chrX 16129585 16129595 chrX 16129696 16129706 5 111 0.0 9.5 4.8 0.9 121 chrX 16129585 intron disco-r - chrX 16129646 intron disco-r - chrX 16129706 intron disco-r - chrX_5_16125001 chrX_16125001 D17-c3 3225 chrX 16222770 16222804 chrX 16231145 16231178 roo 9 8374 0.0 4.5 2.2 2.8 8408 chrX 16222770 intergenic not near genes chrX 16226974 intergenic not near genes chrX 16231178 intergenic not near genes chrX_9_16225001 chrX_16225001 D17-c3 3226 chrX 16245927 16245958 chrX 16246059 16246090 INE-1 11 132 6.0 4.0 5.0 1.8 163 chrX 16245927 intergenic not near genes chrX 16246008 intergenic not near genes chrX 16246090 intergenic not near genes chrX_11_16245001 chrX_16245001 D17-c3 3227 chrX 16273805 16273860 chrX 16276708 16276758 31 2899 40.0 70.0 55.0 0.6 2953 chrX 16273805 intron,3` UTR kat80 -,Mfe2 + chrX 16275282 intron kat80 - chrX 16276758 exon Prosalpha4 + chrX_31_16275001 chrX_16275001 D17-c3 3228 chrX 16295516 16295526 chrX 16295625 16295635 7 109 7.5 0.0 3.8 1.5 119 chrX 16295516 intron CG9911 - chrX 16295576 intron CG9911 - chrX 16295635 intron CG9911 - chrX_7_16295001 chrX_16295001 D17-c3 3229 chrX 16329437 16329441 chrX 16329539 16329549 4 106 1.0 27.5 14.2 0.3 112 chrX 16329437 intron CG9919 - chrX 16329493 intron CG9919 - chrX 16329549 exon CG9919 - chrX_4_16325001 chrX_16325001 D17-c3 3230 chrX 16329442 16329448 chrX 16329534 16329556 8 106 1.0 24.5 12.8 0.6 114 chrX 16329442 intron CG9919 - chrX 16329499 intron CG9919 - chrX 16329556 exon CG9919 - chrX_8_16325001 chrX_16325001 D17-c3 3231 chrX 16340642 16340697 chrX 16349822 16349879 roo 9 9181 0.0 2.0 1.0 4.5 9237 chrX 16340642 intergenic Dsp1 + chrX 16345260 intergenic not near genes chrX 16349879 intergenic sl + chrX_9_16345001 chrX_16345001 D17-c3 3232 chrX 16492623 16492675 chrX 16498225 16498277 mdg3 24 5602 11.0 12.0 11.5 1.9 5654 chrX 16492623 intron para - chrX 16495450 intron para - chrX 16498277 exon para - chrX_24_16495001 chrX_16495001 D17-c3 3233 chrX 16519910 16519967 chrX 16520021 16520078 21 110 3.5 10.0 6.8 2.7 168 chrX 16519910 intron para - chrX 16519994 intron para - chrX 16520078 intron para - chrX_21_16515001 chrX_16515001 D17-c3 3234 chrX 16529376 16529439 chrX 16529520 16529575 15 136 1.0 9.5 5.2 2.4 199 chrX 16529376 intron para - chrX 16529476 intron para - chrX 16529575 intron para - chrX_15_16525001 chrX_16525001 D17-c3 3235 chrX 16552627 16552638 chrX 16552827 16552838 6 200 7.0 13.5 10.2 0.5 211 chrX 16552627 intron Arp2 - chrX 16552732 intron Arp2 - chrX 16552838 intron Arp2 - chrX_6_16550001 chrX_16550001 D17-c3 3236 chrX 16650913 16650925 chrX 16651015 16651027 5 102 4.0 0.0 2.0 1.7 114 chrX 16650913 intergenic CG32573 +,CG42512 + chrX 16650970 intergenic CG32573 +,CG42512 + chrX 16651027 intergenic CG32573 +,CG42512 + chrX_5_16650001 chrX_16650001 D17-c3 3237 chrX 16707972 16707977 chrX 16708131 16708136 5 159 0.0 4.5 2.2 1.6 164 chrX 16707972 intron CG4678 + chrX 16708054 intron CG4678 + chrX 16708136 intron CG4678 + chrX_5_16705001 chrX_16705001 D17-c3 3238 chrX 16724506 16724561 chrX 16724738 16724793 20 228 4.5 6.0 5.2 3.2 287 chrX 16724506 intron CG32572 + chrX 16724650 intron CG32572 + chrX 16724793 intron CG32572 + chrX_20_16720001 chrX_16720001 D17-c3 3239 chrX 16764712 16764726 chrX 16764814 16764828 7 102 11.0 1.0 6.0 1.0 116 chrX 16764712 intron if - chrX 16764770 intron if - chrX 16764828 intron if - chrX_7_16760001 chrX_16760001 D17-c3 3240 chrX 16785251 16785300 chrX 16785380 16785429 17 129 5.0 5.0 5.0 2.8 178 chrX 16785251 3` UTR CG9609 - chrX 16785340 3` UTR CG9609 - chrX 16785429 3` UTR CG9609 - chrX_17_16785001 chrX_16785001 D17-c3 3241 chrX 16821214 16821263 chrX 16821319 16821368 16 105 7.5 2.0 4.8 2.8 154 chrX 16821214 intron CG4829 + chrX 16821291 intron CG4829 + chrX 16821368 intron CG4829 + chrX_16_16820001 chrX_16820001 D17-c3 3242 chrX 16936006 16936031 chrX 16936449 16936474 jockey 10 443 2.5 6.5 4.5 1.8 468 chrX 16936006 intron CG4928 + chrX 16936240 intron CG4928 + chrX 16936474 intron CG4928 + chrX_10_16935001 chrX_16935001 D17-c3 3243 chrX 17011943 17011989 chrX 17012051 17012097 11 107 5.5 7.5 6.5 1.5 154 chrX 17011943 intron CG45002 - chrX 17012020 intron CG45002 - chrX 17012097 intron CG45002 - chrX_11_17010001 chrX_17010001 D17-c3 3244 chrX 17057914 17057927 chrX 17058180 17058193 pogo 4 266 10.0 4.0 7.0 0.5 279 chrX 17057914 intron CG45002 - chrX 17058054 intron CG45002 - chrX 17058193 intron CG45002 - chrX_4_17055001 chrX_17055001 D17-c3 3245 chrX 17063156 17063207 chrX 17063268 17063319 13 112 4.0 4.5 4.2 2.5 163 chrX 17063156 intron CG45002 - chrX 17063238 intron CG45002 - chrX 17063319 intron CG45002 - chrX_13_17060001 chrX_17060001 D17-c3 3246 chrX 17088190 17088199 chrX 17088798 17088817 4 616 2.5 6.0 4.2 0.8 627 chrX 17088190 intergenic not near genes chrX 17088504 intergenic not near genes chrX 17088817 intergenic not near genes chrX_4_17085001 chrX_17085001 D17-c3 3247 chrX 17122637 17122670 chrX 17122753 17122786 12 116 6.0 7.5 6.8 1.5 149 chrX 17122637 intron CG5004 + chrX 17122712 intron CG5004 + chrX 17122786 intron CG5004 + chrX_12_17120001 chrX_17120001 D17-c3 3248 chrX 17195185 17195222 chrX 17200295 17200331 flea 6 5110 7.5 4.5 6.0 0.9 5146 chrX 17195185 3` UTR baz + chrX 17197758 3` UTR baz + chrX 17200331 3` UTR baz + chrX_6_17195001 chrX_17195001 D17-c3 3249 chrX 17205829 17205857 chrX 17205944 17205972 8 115 3.0 5.5 4.2 1.5 143 chrX 17205829 intergenic not near genes chrX 17205900 intergenic not near genes chrX 17205972 intergenic CG32564 + chrX_8_17205001 chrX_17205001 D17-c3 3250 chrX 17221809 17221850 chrX 17221920 17221961 6 111 9.0 5.5 7.2 0.7 152 chrX 17221809 intron CG5172 + chrX 17221885 intron CG5172 + chrX 17221961 intron CG5172 + chrX_6_17220001 chrX_17220001 D17-c3 3251 chrX 17229930 17229967 chrX 17230058 17230095 12 128 7.5 4.5 6.0 1.7 165 chrX 17229930 intergenic CG10597 - chrX 17230012 intergenic CG10597 - chrX 17230095 intergenic CG10597 - chrX_12_17230001 chrX_17230001 D17-c3 3252 chrX 17234242 17234291 chrX 17234361 17234413 4 120 5.5 0.0 2.8 1.1 171 chrX 17234242 intron f + chrX 17234328 intron f + chrX 17234413 intron f + chrX_4_17230001 chrX_17230001 D17-c3 3253 chrX 17237514 17237535 chrX 17237618 17237629 7 106 2.5 8.5 5.5 1.1 115 chrX 17237514 intron f + chrX 17237572 intron f + chrX 17237629 intron f + chrX_7_17235001 chrX_17235001 D17-c3 3254 chrX 17282849 17282878 chrX 17282952 17282981 12 103 12.0 0.5 6.2 1.7 132 chrX 17282849 intron CG5445 + chrX 17282915 5` UTR CG5445 + chrX 17282981 intron CG5445 + chrX_12_17280001 chrX_17280001 D17-c3 3255 chrX 17316344 17316378 chrX 17316453 17316487 5 109 2.0 0.0 1.0 2.5 143 chrX 17316344 intron B-H2 + chrX 17316416 intron B-H2 + chrX 17316487 intron B-H2 + chrX_5_17315001 chrX_17315001 D17-c3 3256 chrX 17343350 17343400 chrX 17343459 17343510 7 110 0.0 4.0 2.0 2.3 160 chrX 17343350 intergenic not near genes chrX 17343430 intergenic not near genes chrX 17343510 intergenic not near genes chrX_7_17340001 chrX_17340001 D17-c3 3257 chrX 17352572 17352620 chrX 17352691 17352748 9 125 0.0 4.5 2.2 2.8 176 chrX 17352572 intergenic not near genes chrX 17352660 intergenic not near genes chrX 17352748 intergenic not near genes chrX_9_17350001 chrX_17350001 D17-c3 3258 chrX 17357519 17357537 chrX 17357638 17357656 4 119 6.0 5.5 5.8 0.6 137 chrX 17357519 intergenic not near genes chrX 17357588 intergenic not near genes chrX 17357656 intergenic not near genes chrX_4_17355001 chrX_17355001 D17-c3 3259 chrX 17434405 17434437 chrX 17434523 17434555 6 116 2.5 0.0 1.2 2.7 150 chrX 17434405 intron CG12994 - chrX 17434480 intron CG12994 - chrX 17434555 intron CG12994 - chrX_6_17430001 chrX_17430001 D17-c3 3260 chrX 17435730 17435781 chrX 17435831 17435882 17 101 2.0 3.5 2.8 4.5 152 chrX 17435730 intron CG12994 - chrX 17435806 intron CG12994 - chrX 17435882 intron CG12994 - chrX_17_17435001 chrX_17435001 D17-c3 3261 chrX 17476446 17476491 chrX 17476538 17476573 11 81 4.5 7.5 6.0 1.6 127 chrX 17476446 intron CG43658 - chrX 17476510 intron CG43658 - chrX 17476573 intron CG43658 - chrX_11_17475001 chrX_17475001 D17-c3 3262 chrX 17536821 17536876 chrX 17536930 17536984 9 108 1.0 4.5 2.8 2.4 163 chrX 17536821 intron CG43658 - chrX 17536902 intron CG43658 - chrX 17536984 intron CG43658 - chrX_9_17535001 chrX_17535001 D17-c3 3263 chrX 17544982 17545033 chrX 17545089 17545140 9 107 3.5 3.0 3.2 2.1 158 chrX 17544982 intron CG43658 - chrX 17545061 intron CG43658 - chrX 17545140 intron CG43658 - chrX_9_17545001 chrX_17545001 D17-c3 3264 chrX 17546945 17547002 chrX 17547103 17547160 7 158 0.5 2.0 1.2 3.2 215 chrX 17546945 intron CG43658 - chrX 17547052 intron CG43658 - chrX 17547160 intron CG43658 - chrX_7_17545001 chrX_17545001 D17-c3 3265 chrX 17556924 17556939 chrX 17557448 17557456 mdg1 4 522 12.0 4.5 8.2 0.4 532 chrX 17556924 intron CG43658 - chrX 17557190 intron CG43658 - chrX 17557456 intron CG43658 - chrX_4_17555001 chrX_17555001 D17-c3 3266 chrX 17716573 17716598 chrX 17716674 17716700 13 109 12.0 7.5 9.8 1.2 127 chrX 17716573 intron CG42684 + chrX 17716636 intron CG42684 + chrX 17716700 intron CG42684 + chrX_13_17715001 chrX_17715001 D17-c3 3267 chrX 17740348 17740404 chrX 17740450 17740506 17 93 10.0 9.0 9.5 1.6 158 chrX 17740348 intron CG42684 + chrX 17740427 intron CG42684 + chrX 17740506 intron CG42684 + chrX_17_17740001 chrX_17740001 D17-c3 3268 chrX 17766336 17766378 chrX 17766459 17766501 10 121 9.5 6.5 8.0 1.1 165 chrX 17766336 intergenic not near genes chrX 17766418 intergenic not near genes chrX 17766501 intergenic not near genes chrX_10_17765001 chrX_17765001 D17-c3 3269 chrX 17771273 17771330 chrX 17771379 17771434 15 102 4.5 10.0 7.2 1.8 161 chrX 17771273 intron unc-4 + chrX 17771354 intron unc-4 + chrX 17771434 intron unc-4 + chrX_15_17770001 chrX_17770001 D17-c3 3270 chrX 17792932 17792976 chrX 17796255 17796293 flea 15 3322 5.5 5.0 5.2 2.4 3361 chrX 17792932 intron OdsH + chrX 17794612 intron OdsH + chrX 17796293 intron OdsH + chrX_15_17790001 chrX_17790001 D17-c3 3271 chrX 17820616 17820644 chrX 17820747 17820775 7 131 0.5 4.0 2.2 2.2 159 chrX 17820616 intergenic Socs16D - chrX 17820696 intergenic Socs16D - chrX 17820775 3` UTR Socs16D - chrX_7_17820001 chrX_17820001 D17-c3 3272 chrX 17879628 17879685 chrX 17879759 17879816 23 129 4.0 6.5 5.2 3.7 188 chrX 17879628 intron mnb - chrX 17879722 intron mnb - chrX 17879816 intron mnb - chrX_23_17875001 chrX_17875001 D17-c3 3273 chrX 17972753 17972765 chrX 17972871 17972883 6 118 6.0 0.0 3.0 1.5 130 chrX 17972753 intron Sh - chrX 17972818 intron Sh - chrX 17972883 intron Sh - chrX_6_17970001 chrX_17970001 D17-c3 3274 chrX 18179543 18179595 chrX 18179810 18179862 19 266 5.0 4.5 4.8 3.3 319 chrX 18179543 intron Frq2 + chrX 18179702 intron Frq2 + chrX 18179862 intron Frq2 + chrX_19_18175001 chrX_18175001 D17-c3 3275 chrX 18194046 18194099 chrX 18194606 18194659 BS 18 558 4.5 6.5 5.5 2.8 613 chrX 18194046 intron Frq2 + chrX 18194352 intron Frq2 + chrX 18194659 intron Frq2 + chrX_18_18190001 chrX_18190001 D17-c3 3276 chrX 18218037 18218066 chrX 18218179 18218208 10 142 3.5 8.5 6.0 1.4 171 chrX 18218037 intron CG33639 - chrX 18218122 intron CG33639 - chrX 18218208 intron CG33639 - chrX_10_18215001 chrX_18215001 D17-c3 3277 chrX 18320465 18320494 chrX 18320622 18320651 7 157 2.0 3.5 2.8 1.8 186 chrX 18320465 intron CG6023 - chrX 18320558 intron CG6023 - chrX 18320651 intron CG6023 - chrX_7_18320001 chrX_18320001 D17-c3 3278 chrX 18337401 18337452 chrX 18337526 18337577 18 125 4.0 3.5 3.8 3.8 176 chrX 18337401 intron CG6123 - chrX 18337489 intron CG6123 - chrX 18337577 intron CG6123 - chrX_18_18335001 chrX_18335001 D17-c3 3279 chrX 18407382 18407426 chrX 18407491 18407534 11 108 9.5 6.5 8.0 1.2 152 chrX 18407382 intron CG32549 - chrX 18407458 intron CG32549 - chrX 18407534 intron CG32549 - chrX_11_18405001 chrX_18405001 D17-c3 3280 chrX 18427356 18427409 chrX 18427792 18427845 19 436 2.5 4.5 3.5 4.2 489 chrX 18427356 intergenic CG42323 + chrX 18427600 intergenic not near genes chrX 18427845 intergenic not near genes chrX_19_18425001 chrX_18425001 D17-c3 3281 chrX 18429471 18429521 chrX 18434806 18434857 Transpac 13 5336 5.0 6.5 5.8 1.9 5386 chrX 18429471 intergenic not near genes chrX 18432164 intergenic not near genes chrX 18434857 intergenic not near genes chrX_13_18430001 chrX_18430001 D17-c3 3282 chrX 18467199 18467256 chrX 18467388 18467445 24 189 5.5 5.0 5.2 3.9 246 chrX 18467199 intron CG32547 - chrX 18467322 intron CG32547 - chrX 18467445 intron CG32547 - chrX_24_18465001 chrX_18465001 D17-c3 3283 chrX 18486083 18486142 chrX 18486197 18486244 25 112 7.5 10.0 8.8 2.6 161 chrX 18486083 exon psh - chrX 18486164 intron psh - chrX 18486244 intron psh - chrX_25_18485001 chrX_18485001 D17-c3 3284 chrX 18490048 18490105 chrX 18490195 18490198 20 137 10.5 7.0 8.8 2.0 150 chrX 18490048 intergenic CG15046 - chrX 18490123 intergenic not near genes chrX 18490198 intergenic not near genes chrX_20_18490001 chrX_18490001 D17-c3 3285 chrX 18574769 18574825 chrX 18574874 18574930 19 105 3.5 4.5 4.0 3.8 161 chrX 18574769 intergenic not near genes chrX 18574850 intergenic not near genes chrX 18574930 intergenic not near genes chrX_19_18570001 chrX_18570001 D17-c3 3286 chrX 18595466 18595519 chrX 18595574 18595618 21 108 6.5 6.0 6.2 2.9 152 chrX 18595466 intergenic not near genes chrX 18595542 intergenic not near genes chrX 18595618 intergenic not near genes chrX_21_18595001 chrX_18595001 D17-c3 3287 chrX 18645005 18645046 chrX 18645111 18645169 23 121 2.5 7.0 4.8 4.0 164 chrX 18645005 intron Rip11 - chrX 18645087 intron Rip11 - chrX 18645169 intron Rip11 - chrX_23_18645001 chrX_18645001 D17-c3 3288 chrX 18662415 18662425 chrX 18662535 18662544 5 120 18.0 10.5 14.2 0.3 129 chrX 18662415 intergenic CG6696 - chrX 18662480 intergenic CG6696 - chrX 18662544 intergenic CG6696 - chrX_5_18660001 chrX_18660001 D17-c3 3289 chrX 18662433 18662457 chrX 18662533 18662577 7 115 8.5 10.5 9.5 0.7 144 chrX 18662433 intergenic CG6696 - chrX 18662505 intergenic CG6696 - chrX 18662577 intergenic CG6696 - chrX_7_18660001 chrX_18660001 D17-c3 3290 chrX 18671198 18671244 chrX 18671305 18671351 8 107 1.5 4.5 3.0 2.0 153 chrX 18671198 intergenic not near genes chrX 18671274 intergenic not near genes chrX 18671351 intergenic not near genes chrX_8_18670001 chrX_18670001 D17-c3 3291 chrX 18698825 18698878 chrX 18698967 18699020 12 139 7.5 6.0 6.8 1.5 195 chrX 18698825 intergenic not near genes chrX 18698922 intergenic not near genes chrX 18699020 intergenic not near genes chrX_12_18695001 chrX_18695001 D17-c3 3292 chrX 18749852 18749898 chrX 18749961 18750007 8 109 4.0 6.0 5.0 1.3 155 chrX 18749852 intergenic not near genes chrX 18749930 intergenic not near genes chrX 18750007 intergenic not near genes chrX_8_18745001 chrX_18745001 D17-c3 3293 chrX 18754320 18754343 chrX 18758012 18758035 297 11 3692 7.0 4.5 5.8 1.6 3715 chrX 18754320 intergenic not near genes chrX 18756178 intergenic not near genes chrX 18758035 intergenic not near genes chrX_11_18755001 chrX_18755001 D17-c3 3294 chrX 18896496 18896546 chrX 18896632 18896682 10 136 3.5 4.0 3.8 2.1 186 chrX 18896496 3` UTR CG7349 + chrX 18896589 intergenic CG7349 + chrX 18896682 intergenic CG7349 + chrX_10_18895001 chrX_18895001 D17-c3 3295 chrX 18947480 18947534 chrX 18947598 18947652 16 118 4.0 4.5 4.2 3.1 172 chrX 18947480 intron CG43759 + chrX 18947566 intron CG43759 + chrX 18947652 intron CG43759 + chrX_16_18945001 chrX_18945001 D17-c3 3296 chrX 18957055 18957072 chrX 18965736 18965753 roo 4 8681 1.0 0.0 0.5 2.7 8698 chrX 18957055 intron CG43759 + chrX 18961404 intron CG43759 + chrX 18965753 intron CG43759 + chrX_4_18960001 chrX_18960001 D17-c3 3297 chrX 19009658 19009705 chrX 19010299 19010303 6 636 0.0 1.5 0.8 3.3 645 chrX 19009658 intron CG43759 + chrX 19009980 intron CG43759 + chrX 19010303 intron CG43759 + chrX_6_19005001 chrX_19005001 D17-c3 3298 chrX 19036405 19036416 chrX 19036506 19036517 4 101 2.5 0.0 1.2 1.8 112 chrX 19036405 intergenic not near genes chrX 19036461 intergenic not near genes chrX 19036517 intergenic not near genes chrX_4_19035001 chrX_19035001 D17-c3 3299 chrX 19058130 19058170 chrX 19058241 19058281 16 111 5.0 9.0 7.0 2.0 151 chrX 19058130 intron CG14190 + chrX 19058206 intron CG14190 + chrX 19058281 intron CG14190 + chrX_16_19055001 chrX_19055001 D17-c3 3300 chrX 19060386 19060414 chrX 19065195 19065223 Doc 4 4809 6.5 4.0 5.2 0.6 4837 chrX 19060386 intron CG14190 + chrX 19062804 intron CG14190 + chrX 19065223 intron CG14190 + chrX_4_19060001 chrX_19060001 D17-c3 3301 chrX 19073669 19073696 chrX 19073781 19073808 10 111 7.0 8.5 7.8 1.1 139 chrX 19073669 intergenic not near genes chrX 19073738 intergenic not near genes chrX 19073808 intergenic not near genes chrX_10_19070001 chrX_19070001 D17-c3 3302 chrX 19080309 19080354 chrX 19080440 19080485 24 131 6.0 10.0 8.0 2.7 176 chrX 19080309 intergenic not near genes chrX 19080397 intergenic not near genes chrX 19080485 intergenic not near genes chrX_24_19080001 chrX_19080001 D17-c3 3303 chrX 19084067 19084123 chrX 19084212 19084268 6 145 1.0 0.5 0.8 3.3 201 chrX 19084067 intergenic CR45503 + chrX 19084168 intergenic CR45503 + chrX 19084268 intergenic CR45503 + chrX_6_19080001 chrX_19080001 D17-c3 3304 chrX 19098732 19098781 chrX 19098834 19098884 11 102 2.5 5.0 3.8 2.3 152 chrX 19098732 intergenic not near genes chrX 19098808 intergenic not near genes chrX 19098884 intergenic not near genes chrX_11_19095001 chrX_19095001 D17-c3 3305 chrX 19099628 19099686 chrX 19099736 19099794 14 108 5.5 7.0 6.2 1.9 166 chrX 19099628 intergenic not near genes chrX 19099711 intergenic not near genes chrX 19099794 intergenic not near genes chrX_14_19095001 chrX_19095001 D17-c3 3306 chrX 19109111 19109140 chrX 19109320 19109349 6 208 0.0 4.5 2.2 1.9 238 chrX 19109111 intergenic not near genes chrX 19109230 intergenic not near genes chrX 19109349 intergenic not near genes chrX_6_19105001 chrX_19105001 D17-c3 3307 chrX 19119676 19119860 chrX 19119787 19119964 11 106 0.0 0.0 0.0 11.0 288 chrX 19119676 intergenic not near genes chrX 19119820 intergenic not near genes chrX 19119964 intergenic not near genes chrX_11_19115001 chrX_19115001 D17-c3 3308 chrX 19124417 19124464 chrX 19124530 19124578 9 113 3.0 2.5 2.8 2.4 161 chrX 19124417 intergenic CG15882 - chrX 19124498 intergenic CG15882 - chrX 19124578 intergenic CG15882 -,tgy - chrX_9_19120001 chrX_19120001 D17-c3 3309 chrX 19125673 19125718 chrX 19125822 19125857 15 148 10.0 7.5 8.8 1.5 184 chrX 19125673 intron tgy - chrX 19125765 intron tgy - chrX 19125857 intron tgy - chrX_15_19125001 chrX_19125001 D17-c3 3310 chrX 19136529 19136583 chrX 19143474 19143526 412 16 6942 6.5 1.5 4.0 3.2 6997 chrX 19136529 intergenic not near genes chrX 19140028 intergenic not near genes chrX 19143526 3` UTR RhoGAP18B - chrX_16_19140001 chrX_19140001 D17-c3 3311 chrX 19181991 19182046 chrX 19182128 19182183 9 137 1.0 0.0 0.5 6.0 192 chrX 19181991 3` UTR CG7453 + chrX 19182087 intergenic CG7453 + chrX 19182183 intergenic CG7453 + chrX_9_19180001 chrX_19180001 D17-c3 3312 chrX 19185511 19185567 chrX 19185632 19185688 8 121 0.0 6.5 3.2 1.9 177 chrX 19185511 intron CG33253 + chrX 19185600 intron CG33253 + chrX 19185688 intron CG33253 + chrX_8_19185001 chrX_19185001 D17-c3 3313 chrX 19339736 19339764 chrX 19339837 19339864 6 101 0.5 3.5 2.0 2.0 128 chrX 19339736 intron nAChRalpha7 - chrX 19339800 intron nAChRalpha7 - chrX 19339864 intron nAChRalpha7 - chrX_6_19335001 chrX_19335001 D17-c3 3314 chrX 19356975 19357023 chrX 19358441 19358507 NOF 10 1471 5.5 0.0 2.8 2.6 1532 chrX 19356975 intron kek5 + chrX 19357741 intron kek5 + chrX 19358507 intron kek5 + chrX_10_19355001 chrX_19355001 D17-c3 3315 chrX 19380138 19380184 chrX 19380404 19380450 pogo 21 265 10.0 2.5 6.2 2.9 312 chrX 19380138 intron kek5 + chrX 19380294 intron kek5 + chrX 19380450 intron kek5 + chrX_21_19380001 chrX_19380001 D17-c3 3316 chrX 19461135 19461170 chrX 19461238 19461291 16 114 5.0 4.5 4.8 2.8 156 chrX 19461135 intron kek5 + chrX 19461213 intron kek5 + chrX 19461291 intron kek5 + chrX_16_19460001 chrX_19460001 D17-c3 3317 chrX 19472099 19472154 chrX 19472694 19472729 jockey 17 585 3.5 7.5 5.5 2.6 630 chrX 19472099 intergenic kek5 + chrX 19472414 intergenic kek5 + chrX 19472729 intergenic not near genes chrX_17_19470001 chrX_19470001 D17-c3 3318 chrX 19541404 19541440 chrX 19541509 19541545 4 105 5.5 2.5 4.0 0.8 141 chrX 19541404 intron CG32532 - chrX 19541474 intron CG32532 - chrX 19541545 intron CG32532 - chrX_4_19540001 chrX_19540001 D17-c3 3319 chrX 19662008 19662057 chrX 19662256 19662305 19 247 3.0 3.5 3.2 4.5 297 chrX 19662008 intron CG14223 - chrX 19662156 intron CG14223 - chrX 19662305 intron CG14223 - chrX_19_19660001 chrX_19660001 D17-c3 3320 chrX 19710047 19710099 chrX 19711858 19711910 S-element 39 1811 11.5 8.5 10.0 3.5 1863 chrX 19710047 intron meso18E - chrX 19710978 intron meso18E - chrX 19711910 intron meso18E - chrX_39_19710001 chrX_19710001 D17-c3 3321 chrX 19744612 19744659 chrX 19744752 19744810 41 142 61.0 65.0 63.0 0.6 198 chrX 19744612 5` UTR,exon CG33932 +,Rpp20 + chrX 19744711 intron,intron CG33932 +,Rpp20 + chrX 19744810 5` UTR,exon CG33932 +,Rpp20 + chrX_41_19740001 chrX_19740001 D17-c3 3322 chrX 19797327 19797340 chrX 19804665 19804678 Stalker4 7 7338 15.0 7.0 11.0 0.6 7351 chrX 19797327 intergenic not near genes chrX 19801002 intergenic not near genes chrX 19804678 intergenic not near genes chrX_7_19800001 chrX_19800001 D17-c3 3323 chrX 19838490 19838527 chrX 19838593 19838630 8 103 9.5 18.5 14.0 0.5 140 chrX 19838490 intron pico - chrX 19838560 intron pico - chrX 19838630 intron pico - chrX_8_19835001 chrX_19835001 D17-c3 3324 chrX 19881430 19881481 chrX 19881536 19881587 19 105 2.5 3.5 3.0 4.8 157 chrX 19881430 intron Hers + chrX 19881508 intron Hers + chrX 19881587 intron Hers + chrX_19_19880001 chrX_19880001 D17-c3 3325 chrX 19884074 19884115 chrX 19884166 19884215 16 90 6.5 4.5 5.5 2.5 141 chrX 19884074 intron Hers + chrX 19884144 intron Hers + chrX 19884215 intron Hers + chrX_16_19880001 chrX_19880001 D17-c3 3326 chrX 19897361 19897415 chrX 19897463 19897517 19 102 7.5 8.0 7.8 2.2 156 chrX 19897361 intron Hers + chrX 19897439 intron Hers + chrX 19897517 intron Hers + chrX_19_19895001 chrX_19895001 D17-c3 3327 chrX 19983847 19983886 chrX 19983952 19983991 6 102 0.0 2.0 1.0 3.0 144 chrX 19983847 intergenic not near genes chrX 19983919 intergenic not near genes chrX 19983991 intergenic not near genes chrX_6_19980001 chrX_19980001 D17-c3 3328 chrX 19992393 19992405 chrX 19992494 19992505 12 101 16.0 11.5 13.8 0.8 112 chrX 19992393 intergenic not near genes chrX 19992449 intergenic not near genes chrX 19992505 intergenic not near genes chrX_12_19990001 chrX_19990001 D17-c3 3329 chrX 19992406 19992428 chrX 19992492 19992523 17 97 13.5 10.5 12.0 1.3 117 chrX 19992406 intergenic not near genes chrX 19992464 intergenic not near genes chrX 19992523 intergenic not near genes chrX_17_19990001 chrX_19990001 D17-c3 3330 chrX 20041522 20041562 chrX 20041627 20041667 13 105 3.0 8.0 5.5 2.0 145 chrX 20041522 intron Dop2R - chrX 20041594 intron Dop2R - chrX 20041667 intron Dop2R - chrX_13_20040001 chrX_20040001 D17-c3 3331 chrX 20052763 20052810 chrX 20052872 20052905 24 108 8.5 7.0 7.8 2.7 142 chrX 20052763 intron Dop2R - chrX 20052834 intron Dop2R - chrX 20052905 intron Dop2R - chrX_24_20050001 chrX_20050001 D17-c3 3332 chrX 20125375 20125384 chrX 20125482 20125491 4 107 4.5 3.5 4.0 0.8 116 chrX 20125375 intergenic CG34331 + chrX 20125433 intergenic CG34331 + chrX 20125491 intergenic CG34331 + chrX_4_20125001 chrX_20125001 D17-c3 3333 chrX 20132281 20132307 chrX 20132389 20132415 10 108 11.5 13.5 12.5 0.7 134 chrX 20132281 intergenic not near genes chrX 20132348 intergenic not near genes chrX 20132415 intergenic not near genes chrX_10_20130001 chrX_20130001 D17-c3 3334 chrX 20271480 20271515 chrX 20271597 20271602 8 113 4.5 0.0 2.2 2.5 122 chrX 20271480 intergenic not near genes chrX 20271541 intergenic not near genes chrX 20271602 intergenic not near genes chrX_8_20270001 chrX_20270001 D17-c3 3335 chrX 20279726 20279776 chrX 20279832 20279882 12 106 3.5 1.5 2.5 3.4 156 chrX 20279726 intergenic not near genes chrX 20279804 intergenic not near genes chrX 20279882 intergenic not near genes chrX_12_20275001 chrX_20275001 D17-c3 3336 chrX 20312856 20312911 chrX 20312959 20313014 18 102 6.0 3.5 4.8 3.1 158 chrX 20312856 intron CG1504 - chrX 20312935 intron CG1504 - chrX 20313014 intron CG1504 - chrX_18_20310001 chrX_20310001 D17-c3 3337 chrX 20314247 20314260 chrX 20314354 20314367 6 106 13.5 15.0 14.2 0.4 120 chrX 20314247 intron CG1504 - chrX 20314307 intron CG1504 - chrX 20314367 intron CG1504 - chrX_6_20310001 chrX_20310001 D17-c3 3338 chrX 20317753 20317801 chrX 20317861 20317909 17 107 8.0 7.5 7.8 1.9 156 chrX 20317753 intron CG1504 - chrX 20317831 intron CG1504 - chrX 20317909 intron CG1504 - chrX_17_20315001 chrX_20315001 D17-c3 3339 chrX 20369298 20369340 chrX 20369407 20369449 20 109 3.5 4.0 3.8 4.2 151 chrX 20369298 intergenic not near genes chrX 20369374 intergenic not near genes chrX 20369449 intergenic not near genes chrX_20_20365001 chrX_20365001 D17-c3 3340 chrX 20377325 20377340 chrX 20378817 20378832 hobo 6 1492 6.5 18.5 12.5 0.4 1507 chrX 20377325 intergenic not near genes chrX 20378078 intergenic not near genes chrX 20378832 intergenic not near genes chrX_6_20375001 chrX_20375001 D17-c3 3341 chrX 20432158 20432207 chrX 20432251 20432308 30 100 8.0 7.0 7.5 3.5 150 chrX 20432158 exon mal + chrX 20432233 exon mal + chrX 20432308 exon mal + chrX_30_20430001 chrX_20430001 D17-c3 3342 chrX 20443163 20443201 chrX 20443264 20443302 11 101 6.5 7.0 6.8 1.4 139 chrX 20443163 exon CG1695 + chrX 20443232 intron CG1695 + chrX 20443302 intron CG1695 + chrX_11_20440001 chrX_20440001 D17-c3 3343 chrX 20493911 20493922 chrX 20494097 20494108 4 186 0.0 6.5 3.2 1.0 197 chrX 20493911 intron RhoGAP19D - chrX 20494010 intron RhoGAP19D - chrX 20494108 intron RhoGAP19D - chrX_4_20490001 chrX_20490001 D17-c3 3344 chrX 20504109 20504155 chrX 20505655 20505701 transib2 15 1545 5.5 5.0 5.2 2.4 1592 chrX 20504109 intron RhoGAP19D - chrX 20504905 intron RhoGAP19D - chrX 20505701 intron RhoGAP19D - chrX_15_20500001 chrX_20500001 D17-c3 3345 chrX 20528580 20528629 chrX 20528953 20529002 19 373 3.0 3.5 3.2 4.5 422 chrX 20528580 intergenic not near genes chrX 20528791 intergenic not near genes chrX 20529002 intergenic not near genes chrX_19_20525001 chrX_20525001 D17-c3 3346 chrX 20531737 20531797 chrX 20531861 20531921 15 124 1.5 3.5 2.5 4.3 184 chrX 20531737 intergenic not near genes chrX 20531829 intergenic not near genes chrX 20531921 intergenic not near genes chrX_15_20530001 chrX_20530001 D17-c3 3347 chrX 20541308 20541339 chrX 20541459 20541487 8 148 1.5 0.0 0.8 4.4 179 chrX 20541308 intron RunxB + chrX 20541398 intron RunxB + chrX 20541487 intron RunxB + chrX_8_20540001 chrX_20540001 D17-c3 3348 chrX 20546530 20546564 chrX 20546721 20546755 15 191 7.5 1.5 4.5 2.7 225 chrX 20546530 intron RunxB + chrX 20546642 intron RunxB + chrX 20546755 intron RunxB + chrX_15_20545001 chrX_20545001 D17-c3 3349 chrX 20572744 20572801 chrX 20573069 20573121 20 325 4.5 2.5 3.5 4.4 377 chrX 20572744 intergenic not near genes chrX 20572932 intergenic not near genes chrX 20573121 intergenic not near genes chrX_20_20570001 chrX_20570001 D17-c3 3350 chrX 20593652 20593709 chrX 20593983 20594014 8 321 4.0 5.5 4.8 1.4 362 chrX 20593652 intron RunxA - chrX 20593833 intron RunxA - chrX 20594014 intron RunxA - chrX_8_20590001 chrX_20590001 D17-c3 3351 chrX 20634413 20634422 chrX 20634523 20634532 4 110 8.0 5.0 6.5 0.5 119 chrX 20634413 intergenic not near genes chrX 20634472 intergenic not near genes chrX 20634532 intergenic not near genes chrX_4_20630001 chrX_20630001 D17-c3 3352 chrX 20634423 20634454 chrX 20634520 20634564 8 108 3.0 4.5 3.8 1.7 141 chrX 20634423 intergenic not near genes chrX 20634494 intergenic not near genes chrX 20634564 intergenic not near genes chrX_8_20630001 chrX_20630001 D17-c3 3353 chrX 20635412 20635446 chrX 20635603 20635636 13 190 5.5 2.0 3.8 2.7 224 chrX 20635412 intergenic not near genes chrX 20635524 intergenic not near genes chrX 20635636 intergenic not near genes chrX_13_20635001 chrX_20635001 D17-c3 3354 chrX 20662291 20662336 chrX 20662399 20662440 4 107 7.5 0.5 4.0 0.8 149 chrX 20662291 intron CG1835 + chrX 20662366 intron CG1835 + chrX 20662440 intron CG1835 + chrX_4_20660001 chrX_20660001 D17-c3 3355 chrX 20710413 20710435 chrX 20710515 20710537 4 102 5.0 3.0 4.0 0.8 124 chrX 20710413 intergenic not near genes chrX 20710475 intergenic not near genes chrX 20710537 intergenic not near genes chrX_4_20710001 chrX_20710001 D17-c3 3356 chrX 20780202 20780238 chrX 20780452 20780488 18 250 6.0 6.0 6.0 2.6 286 chrX 20780202 intron,3` UTR shakB -,CG32507 - chrX 20780345 intron,3` UTR shakB -,CG32507 - chrX 20780488 intron,3` UTR shakB -,CG32507 - chrX_18_20780001 chrX_20780001 D17-c3 3357 chrX 20791532 20791577 chrX 20791657 20791702 8 125 8.5 3.0 5.8 1.2 170 chrX 20791532 intron shakB - chrX 20791617 intron shakB - chrX 20791702 intron shakB - chrX_8_20790001 chrX_20790001 D17-c3 3358 chrX 20836706 20836758 chrX 20844333 20844385 roo 12 7627 1.5 5.0 3.2 2.9 7679 chrX 20836706 intron shakB - chrX 20840546 intron shakB - chrX 20844385 intron shakB - chrX_12_20840001 chrX_20840001 D17-c3 3359 chrX 20911894 20911915 chrX 20911996 20912017 12 100 8.0 11.0 9.5 1.1 123 chrX 20911894 intron shakB - chrX 20911956 intron shakB - chrX 20912017 intron shakB - chrX_12_20910001 chrX_20910001 D17-c3 3360 chrX 20940699 20940735 chrX 20942193 20942229 hobo 16 1494 6.5 7.0 6.8 2.1 1530 chrX 20940699 intergenic not near genes chrX 20941464 intergenic not near genes chrX 20942229 intergenic not near genes chrX_16_20940001 chrX_20940001 D17-c3 3361 chrX 20981005 20981060 chrX 20981133 20981188 21 126 6.5 8.0 7.2 2.6 183 chrX 20981005 intergenic not near genes chrX 20981096 intergenic not near genes chrX 20981188 intergenic not near genes chrX_21_20980001 chrX_20980001 D17-c3 3362 chrX 21009819 21009843 chrX 21009952 21009976 5 133 4.5 4.0 4.2 1.0 157 chrX 21009819 intergenic not near genes chrX 21009898 intergenic not near genes chrX 21009976 intergenic not near genes chrX_5_21005001 chrX_21005001 D17-c3 3363 chrX 21022254 21022269 chrX 21022448 21022463 5 193 16.0 11.5 13.8 0.3 209 chrX 21022254 intergenic not near genes chrX 21022358 intergenic not near genes chrX 21022463 intergenic not near genes chrX_5_21020001 chrX_21020001 D17-c3 3364 chrX 21040450 21040477 chrX 21045353 21045370 5 4895 52.5 56.5 54.5 0.1 4920 chrX 21040450 3` UTR,5` UTR Ntf-2 +,CG15449 - chrX 21042910 intron Mgstl + chrX 21045370 intron Cbs + chrX_5_21040001 chrX_21040001 D17-c3 3365 chrX 21040449 21040493 chrX 21045377 21045401 13 4900 58.5 50.0 54.2 0.2 4952 chrX 21040449 3` UTR,5` UTR Ntf-2 +,CG15449 - chrX 21042925 intron Mgstl + chrX 21045401 intron Cbs + chrX_13_21040001 chrX_21040001 D17-c3 3366 chrX 21061859 21061894 chrX 21062370 21062405 roo 4 511 2.5 3.0 2.8 1.1 546 chrX 21061859 intron bves + chrX 21062132 intron bves + chrX 21062405 intron,3` UTR bves +,CG32512 - chrX_4_21060001 chrX_21060001 D17-c3 3367 chrX 21076311 21076356 chrX 21076405 21076460 16 93 5.0 0.0 2.5 4.6 149 chrX 21076311 intron bves + chrX 21076386 intron bves + chrX 21076460 intron bves + chrX_16_21075001 chrX_21075001 D17-c3 3368 chrX 21086112 21086159 chrX 21087166 21087213 jockey 13 1054 6.0 6.0 6.0 1.9 1101 chrX 21086112 intergenic not near genes chrX 21086662 intergenic not near genes chrX 21087213 intergenic not near genes chrX_13_21085001 chrX_21085001 D17-c3 3369 chrX 21088018 21088073 chrX 21088175 21088230 15 156 4.5 2.5 3.5 3.3 212 chrX 21088018 intergenic not near genes chrX 21088124 intergenic not near genes chrX 21088230 intergenic not near genes chrX_15_21085001 chrX_21085001 D17-c3 3370 chrX 21190558 21190821 chrX 21190738 21190927 11 113 1.0 1.0 1.0 5.5 369 chrX 21190558 intergenic not near genes chrX 21190742 intergenic not near genes chrX 21190927 intergenic not near genes chrX_11_21190001 chrX_21190001 D17-c3 3371 chrX 21197054 21197088 chrX 21197136 21197191 17 97 7.5 3.0 5.2 2.7 137 chrX 21197054 intergenic not near genes chrX 21197122 intergenic not near genes chrX 21197191 intergenic not near genes chrX_17_21195001 chrX_21195001 D17-c3 3372 chrX 21228994 21229051 chrX 21229095 21229152 14 101 3.0 3.5 3.2 3.3 158 chrX 21228994 intron CG32521 - chrX 21229073 intron CG32521 - chrX 21229152 intron CG32521 - chrX_14_21225001 chrX_21225001 D17-c3 3373 chrX 21233373 21233399 chrX 21233476 21233502 13 102 12.0 8.5 10.2 1.2 129 chrX 21233373 intron CG32521 - chrX 21233438 intron CG32521 - chrX 21233502 intron CG32521 - chrX_13_21230001 chrX_21230001 D17-c3 3374 chrX 21253268 21253291 chrX 21253370 21253393 10 102 9.5 9.5 9.5 1.0 125 chrX 21253268 intron CG32521 - chrX 21253330 intron CG32521 - chrX 21253393 intron CG32521 - chrX_10_21250001 chrX_21250001 D17-c3 3375 chrX 21254617 21254625 chrX 21254724 21254734 4 110 8.5 0.0 4.2 0.8 117 chrX 21254617 intron CG32521 - chrX 21254676 intron CG32521 - chrX 21254734 intron CG32521 - chrX_4_21250001 chrX_21250001 D17-c3 3376 chrX 21255471 21255510 chrX 21255622 21255656 17 151 5.5 0.5 3.0 4.2 185 chrX 21255471 intron CG32521 - chrX 21255564 intron CG32521 - chrX 21255656 intron CG32521 - chrX_17_21255001 chrX_21255001 D17-c3 3377 chrX 21268043 21268081 chrX 21268149 21268187 20 105 4.0 3.0 3.5 4.4 144 chrX 21268043 intron CG32521 - chrX 21268115 intron CG32521 - chrX 21268187 intron CG32521 - chrX_20_21265001 chrX_21265001 D17-c3 3378 chrX 21270321 21270364 chrX 21270436 21270479 13 114 6.5 4.5 5.5 2.0 158 chrX 21270321 intron CG32521 - chrX 21270400 intron CG32521 - chrX 21270479 intron CG32521 - chrX_13_21270001 chrX_21270001 D17-c3 3379 chrX 21275138 21275181 chrX 21275241 21275284 19 103 5.5 4.5 5.0 3.2 146 chrX 21275138 intron CG32521 - chrX 21275211 intron CG32521 - chrX 21275284 intron CG32521 - chrX_19_21275001 chrX_21275001 D17-c3 3380 chrX 21308847 21308874 chrX 21308978 21309025 5 135 9.5 0.5 5.0 0.8 178 chrX 21308847 exon CG1801 - chrX 21308936 intron CG1801 - chrX 21309025 intron CG1801 - chrX_5_21305001 chrX_21305001 D17-c3 3381 chrX 21328094 21328148 chrX 21328230 21328279 11 135 2.0 2.0 2.0 3.7 185 chrX 21328094 3` UTR CG1486 + chrX 21328186 intergenic CG1486 +,tty - chrX 21328279 intergenic CG1486 +,tty - chrX_11_21325001 chrX_21325001 D17-c3 3382 chrX 21358050 21358092 chrX 21358155 21358197 16 104 6.0 6.0 6.0 2.3 147 chrX 21358050 intergenic sol +,Sep1 + chrX 21358124 intergenic Sep1 +,sol + chrX 21358197 intergenic Sep1 +,sol + chrX_16_21355001 chrX_21355001 D17-c3 3383 chrX 21398859 21398901 chrX 21398961 21399003 11 102 4.0 5.5 4.8 1.9 144 chrX 21398859 intergenic not near genes chrX 21398931 intergenic not near genes chrX 21399003 intergenic not near genes chrX_11_21395001 chrX_21395001 D17-c3 3384 chrX 21410632 21410654 chrX 21410736 21410758 7 104 1.0 3.5 2.2 2.2 126 chrX 21410632 intergenic CR45003 - chrX 21410695 intergenic CR45003 - chrX 21410758 intergenic CR45003 - chrX_7_21410001 chrX_21410001 D17-c3 3385 chrX 21419187 21419235 chrX 21419297 21419345 14 110 7.5 3.0 5.2 2.3 158 chrX 21419187 intergenic not near genes chrX 21419266 intergenic not near genes chrX 21419345 intergenic not near genes chrX_14_21415001 chrX_21415001 D17-c3 3386 chrX 21452741 21452770 chrX 21452847 21452876 5 106 0.0 5.5 2.8 1.3 135 chrX 21452741 intron CG42343 - chrX 21452808 intron CG42343 - chrX 21452876 intron CG42343 - chrX_5_21450001 chrX_21450001 D17-c3 3387 chrX 21454840 21454871 chrX 21454949 21454980 5 109 5.0 5.5 5.2 0.8 140 chrX 21454840 intron CG42343 - chrX 21454910 intron CG42343 - chrX 21454980 intron CG42343 - chrX_5_21450001 chrX_21450001 D17-c3 3388 chrX 21455188 21455229 chrX 21455392 21455441 5 209 3.5 0.0 1.8 1.8 253 chrX 21455188 intron CG42343 - chrX 21455314 intron CG42343 - chrX 21455441 intron CG42343 - chrX_5_21455001 chrX_21455001 D17-c3 3389 chrX 21458691 21458714 chrX 21464152 21464175 Ivk 6 5461 5.5 7.0 6.2 0.8 5484 chrX 21458691 intergenic not near genes chrX 21461433 intergenic not near genes chrX 21464175 intergenic not near genes chrX_6_21460001 chrX_21460001 D17-c3 3390 chrX 21474381 21474435 chrX 21474772 21474826 1731 26 391 4.0 5.5 4.8 4.5 445 chrX 21474381 intergenic not near genes chrX 21474604 intergenic not near genes chrX 21474826 intergenic not near genes chrX_26_21470001 chrX_21470001 D17-c3 3391 chrX 21507303 21507353 chrX 21507418 21507468 19 115 7.5 8.5 8.0 2.1 165 chrX 21507303 intron CR45082 - chrX 21507386 intron CR45082 - chrX 21507468 intron CR45082 - chrX_19_21505001 chrX_21505001 D17-c3 3392 chrX 21567933 21568057 chrX 21568039 21568158 15 102 0.0 0.0 0.0 15.0 225 chrX 21567933 intergenic not near genes chrX 21568046 intergenic not near genes chrX 21568158 intergenic not near genes chrX_15_21565001 chrX_21565001 D17-c3 3393 chrX 21668236 21668290 chrX 21668346 21668400 13 110 73.5 68.0 70.8 0.2 164 chrX 21668236 intergenic not near genes chrX 21668318 intergenic not near genes chrX 21668400 intergenic not near genes chrX_13_21665001 chrX_21665001 D17-c3 3394 chrX 22522605 22522652 chrX 22525450 22525493 NOF 12 2843 5.5 4.0 4.8 2.1 2888 chrX 22522605 intron CG17600 + chrX 22524049 intron CG17600 + chrX 22525493 intron CG17600 + chrX_12_22520001 chrX_22520001 D17-c3 3395 chrX 22596924 22596962 chrX 22597320 22597368 15 405 5.0 7.0 6.0 2.1 444 chrX 22596924 intron Cda4 - chrX 22597146 intron Cda4 - chrX 22597368 intron Cda4 - chrX_15_22595001 chrX_22595001 D17-c3 3396 chrX 22660552 22660599 chrX 22660661 22660708 10 109 8.5 6.5 7.5 1.2 156 chrX 22660552 intron CR44997 + chrX 22660630 intron CR44997 + chrX 22660708 intron CR44997 + chrX_10_22660001 chrX_22660001 D17-c3 3397 chrX 22696997 22697052 chrX 22697138 22697193 33 139 6.5 4.5 5.5 5.1 196 chrX 22696997 intron CR44997 + chrX 22697095 intron CR44997 + chrX 22697193 intron CR44997 + chrX_33_22695001 chrX_22695001 D17-c3 3398 chrX 22697475 22697521 chrX 22701797 22701843 Juan 16 4322 10.5 7.5 9.0 1.6 4368 chrX 22697475 intron CR44997 + chrX 22699659 intron CR44997 + chrX 22701843 intron CR44997 + chrX_16_22695001 chrX_22695001 D17-c3 3399 chrX 22771481 22771538 chrX 22774797 22774799 297 20 3307 4.0 4.0 4.0 4.0 3318 chrX 22771481 intron CR44997 + chrX 22773140 intron CR44997 + chrX 22774799 intron CR44997 + chrX_20_22770001 chrX_22770001 D17-c3 3400 chrX 22784056 22784102 chrX 22784164 22784210 10 108 2.5 2.5 2.5 2.9 154 chrX 22784056 intron CR44997 + chrX 22784133 intron CR44997 + chrX 22784210 intron CR44997 + chrX_10_22780001 chrX_22780001 D17-c3 3401 chrX 22797011 22797024 chrX 22797121 22797134 5 110 2.0 5.0 3.5 1.1 123 chrX 22797011 intron CR44997 + chrX 22797072 intron CR44997 + chrX 22797134 intron CR44997 + chrX_5_22795001 chrX_22795001 D17-c3 3402 chrX 22811977 22812005 chrX 22816774 22816802 F-element 11 4796 6.5 6.0 6.2 1.5 4825 chrX 22811977 intergenic CG12446 - chrX 22814390 intergenic not near genes chrX 22816802 intergenic not near genes chrX_11_22810001 chrX_22810001 D17-c3 3403 chrX 22824221 22824443 chrX 22824372 22824601 24 156 4.0 4.0 4.0 4.8 380 chrX 22824221 intergenic fog - chrX 22824411 3` UTR fog - chrX 22824601 3` UTR fog - chrX_24_22820001 chrX_22820001 D17-c3 3404 chrX 22870841 22870900 chrX 22870957 22871016 27 115 6.5 9.5 8.0 3.0 175 chrX 22870841 intron,3` UTR CG42346 +,CR43656 - chrX 22870928 intron,3` UTR CG42346 +,CR43656 - chrX 22871016 intron,3` UTR CG42346 +,CR43656 - chrX_27_22870001 chrX_22870001 D17-c3 3405 chrX 22895702 22895756 chrX 22895845 22895899 31 141 6.5 7.5 7.0 3.9 197 chrX 22895702 intergenic not near genes chrX 22895800 intergenic not near genes chrX 22895899 intergenic not near genes chrX_31_22895001 chrX_22895001 D17-c3 3406 chrX 22967370 22967527 chrX 23154546 23154691 diver 5 187173 2.5 22.0 12.2 0.4 187321 chrX 22967370 intergenic not near genes chrX 23061030 intergenic not near genes chrX 23154691 intergenic not near genes chrX_5_23060001 chrX_23060001 D17-c3 3407 chrX 22987093 22987132 chrX 22989777 22989816 Burdock 9 2684 3.5 3.5 3.5 2.0 2723 chrX 22987093 intron,intron stnA -,stnB - chrX 22988454 intron,intron stnA -,stnB - chrX 22989816 intron,intron stnA -,stnB - chrX_9_22985001 chrX_22985001 D17-c3 3408 chrX 22992383 22992417 chrX 22992539 22992573 6 156 4.0 5.0 4.5 1.1 190 chrX 22992383 intron,intron stnA -,stnB - chrX 22992478 intron,intron stnA -,stnB - chrX 22992573 3` UTR,exon stnA -,stnB - chrX_6_22990001 chrX_22990001 D17-c3 3409 chrX 22996292 22996339 chrX 23003549 23003596 roo 11 7257 4.0 3.5 3.8 2.3 7304 chrX 22996292 intron,intron stnA -,stnB - chrX 22999944 intron,intron stnA -,stnB - chrX 23003596 intron,intron stnA -,stnB - chrX_11_22995001 chrX_22995001 D17-c3 3410 chrY 424991 425007 chrY 685047 685063 Rt1c 4 260056 0.0 0.0 0.0 4.0 260072 chrY 424991 intergenic not near genes chrY 555027 intron kl-3 + chrY 685063 intergenic not near genes chrY_4_555001 chrY_555001 D17-c3 3411 chrY 1419880 1419913 chrY 1420159 1420192 6 279 17.0 10.0 13.5 0.4 312 chrY 1419880 intergenic not near genes chrY 1420036 intergenic not near genes chrY 1420192 intergenic not near genes chrY_6_1420001 chrY_1420001 D17-c3