SV#	Chr_5p	Chr_coord_5p_start	Chr_coord_5p_end	Chr_3p	Chr_coord_3p_start	Chr_coord_3p_end	repName	Reads_collapsed	avg_del_len	RefGen_3prime	Refgen_5prime	RefGen_Avg	Coverage_Ratio	size	Chr_5p	Chr_coord_5p	classification_5p	comment_5p	Chr_mid	Chr_coord_mid	classification_mid	comment_mid	Chr_3p	Chr_coord_3p	classification_3p	comment_3p	depletion_code	loci_code	libname
2	chr2L	47436	47473	chr2L	52565	52597	jockey	7	5127	6.5	2.5	4.5	1.3	5161	chr2L	47436	intron	Cda5 -	chr2L	50016	intron	Cda5 -	chr2L	52597	intron	Cda5 -	chr2L_7_50001	chr2L_50001	1182-4H
7	chr2L	347860	347913	chr2L	355385	355436	blood	11	7525	3.0	4.0	3.5	2.4	7576	chr2L	347860	3` UTR	Plc21C +	chr2L	351648	intron	Plc21C +	chr2L	355436	3` UTR	Plc21C +	chr2L_11_350001	chr2L_350001	1182-4H
12	chr2L	686918	686949	chr2L	695963	696014	roo	4	9058	3.5	3.0	3.2	1.0	9096	chr2L	686918	intron	ds -	chr2L	691466	intron	ds -	chr2L	696014	intron	ds -	chr2L_4_690001	chr2L_690001	1182-4H
18	chr2L	770443	770484	chr2L	772249	772290	Bari1	6	1800	1.5	6.5	4.0	1.2	1847	chr2L	770443	intergenic	not near genes	chr2L	771366	intergenic	not near genes	chr2L	772290	intergenic	CR44614 +	chr2L_6_770001	chr2L_770001	1182-4H
21	chr2L	976856	976902	chr2L	984517	984563	roo	7	7659	1.5	2.5	2.0	2.3	7707	chr2L	976856	intergenic	not near genes	chr2L	980710	intergenic	not near genes	chr2L	984563	intergenic	not near genes	chr2L_7_980001	chr2L_980001	1182-4H
27	chr2L	1220105	1220155	chr2L	1227596	1227646	blood	10	7490	2.0	4.0	3.0	2.5	7541	chr2L	1220105	intron	CG42329 +	chr2L	1223876	intron	CG42329 +	chr2L	1227646	intron	CG42329 +	chr2L_10_1220001	chr2L_1220001	1182-4H
31	chr2L	1570685	1570717	chr2L	1573567	1573611	F-element	7	2894	4.0	4.5	4.2	1.3	2926	chr2L	1570685	intron	haf +	chr2L	1572148	intron	haf +	chr2L	1573611	intron	haf +	chr2L_7_1570001	chr2L_1570001	1182-4H
36	chr2L	1711347	1711387	chr2L	1711681	1711736	mdg3	17	347	9.0	7.0	8.0	1.9	389	chr2L	1711347	3` UTR,3` UTR	mRpL48 +,frtz -	chr2L	1711542	3` UTR	frtz -	chr2L	1711736	3` UTR	frtz -	chr2L_17_1710001	chr2L_1710001	1182-4H
43	chr2L	2112123	2112139	chr2L	2119777	2119821	opus	12	7673	3.0	5.0	4.0	2.4	7698	chr2L	2112123	intergenic	not near genes	chr2L	2115972	intergenic	not near genes	chr2L	2119821	intergenic	not near genes	chr2L_12_2115001	chr2L_2115001	1182-4H
47	chr2L	2294034	2294065	chr2L	2299248	2299295	copia	11	5222	4.5	9.0	6.8	1.4	5261	chr2L	2294034	intergenic	not near genes	chr2L	2296664	intergenic	not near genes	chr2L	2299295	intergenic	not near genes	chr2L_11_2295001	chr2L_2295001	1182-4H
53	chr2L	2565534	2565558	chr2L	2571629	2571656	297	12	6097	1.0	4.0	2.5	3.4	6122	chr2L	2565534	exon	Cyp309a2 -	chr2L	2568595	intron	Cyp309a2 -	chr2L	2571656	exon	Cyp309a2 -	chr2L_12_2565001	chr2L_2565001	1182-4H
55	chr2L	2661182	2661222	chr2L	2663045	2663060	I-element	10	1856	3.5	5.0	4.2	1.9	1878	chr2L	2661182	intergenic	not near genes	chr2L	2662121	intergenic	not near genes	chr2L	2663060	intergenic	not near genes	chr2L_10_2660001	chr2L_2660001	1182-4H
56	chr2L	2661227	2661234	chr2L	2663033	2663066	I-element	5	1826	2.5	4.0	3.2	1.2	1839	chr2L	2661227	intergenic	not near genes	chr2L	2662146	intergenic	not near genes	chr2L	2663066	intergenic	not near genes	chr2L_5_2660001	chr2L_2660001	1182-4H
60	chr2L	2772604	2772613	chr2L	2779211	2779218	297	4	6606	6.0	7.5	6.8	0.5	6614	chr2L	2772604	3` UTR	Syt1 -	chr2L	2775911	intron	Syt1 -	chr2L	2779218	3` UTR	Syt1 -	chr2L_4_2775001	chr2L_2775001	1182-4H
64	chr2L	3251472	3251520	chr2L	3259062	3259110	springer	7	7590	1.5	3.5	2.5	2.0	7638	chr2L	3251472	intergenic	not near genes	chr2L	3255291	intergenic	not near genes	chr2L	3259110	intergenic	not near genes	chr2L_7_3255001	chr2L_3255001	1182-4H
67	chr2L	3388582	3388627	chr2L	3388848	3388893	pogo	8	266	1.5	2.0	1.8	2.9	311	chr2L	3388582	intergenic	CG42460 -	chr2L	3388738	intergenic	CG42460 -	chr2L	3388893	intergenic	CG42460 -,CR44791 +	chr2L_8_3385001	chr2L_3385001	1182-4H
74	chr2L	3649766	3649813	chr2L	3654994	3655041	copia	11	5228	4.0	4.0	4.0	2.2	5275	chr2L	3649766	intron	for -	chr2L	3652404	intron	for -	chr2L	3655041	intron	for -	chr2L_11_3650001	chr2L_3650001	1182-4H
79	chr2L	4066020	4066057	chr2L	4068870	4068901	Juan	5	2847	5.5	4.0	4.8	0.9	2881	chr2L	4066020	intron	ed +	chr2L	4067460	intron	ed +	chr2L	4068901	intron	ed +	chr2L_5_4065001	chr2L_4065001	1182-4H
86	chr2L	4601679	4601734	chr2L	4609145	4609199	mdg1	18	7464	5.0	2.0	3.5	4.0	7520	chr2L	4601679	intron	dp -	chr2L	4605439	intron	dp -	chr2L	4609199	intron	dp -	chr2L_18_4605001	chr2L_4605001	1182-4H
87	chr2L	4661819	4661853	chr2L	4669424	4669458	opus	12	7604	1.0	5.5	3.2	2.9	7639	chr2L	4661819	intergenic	not near genes	chr2L	4665638	intergenic	not near genes	chr2L	4669458	intergenic	not near genes	chr2L_12_4665001	chr2L_4665001	1182-4H
99	chr2L	5827707	5827736	chr2L	5836739	5836764	roo	5	9031	2.5	1.5	2.0	1.7	9057	chr2L	5827707	intron	TrissinR +	chr2L	5832236	intron	TrissinR +	chr2L	5836764	intron	TrissinR +	chr2L_5_5830001	chr2L_5830001	1182-4H
121	chr2L	6363136	6363182	chr2L	6366087	6366124	Burdock	9	2949	1.5	2.0	1.8	3.2	2988	chr2L	6363136	intergenic	not near genes	chr2L	6364630	intergenic	not near genes	chr2L	6366124	intergenic	not near genes	chr2L_9_6360001	chr2L_6360001	1182-4H
122	chr2L	6426837	6426884	chr2L	6445122	6445169	roo	12	18285	1.5	7.0	4.2	2.3	18332	chr2L	6426837	3` UTR	CG9527 -	chr2L	6436003	intron	CG9527 -	chr2L	6445169	exon	CG9527 -	chr2L_12_6435001	chr2L_6435001	1182-4H
131	chr2L	6991415	6991431	chr2L	6998554	6998577	HMS-Beagle	6	7144	8.0	2.5	5.2	1.0	7162	chr2L	6991415	intron	uif -	chr2L	6994996	intron	uif -	chr2L	6998577	intron	uif -	chr2L_6_6990001	chr2L_6990001	1182-4H
136	chr2L	7343302	7343347	chr2L	7350443	7350488	roo	18	7141	4.5	3.5	4.0	3.6	7186	chr2L	7343302	intron	Wnt6 +	chr2L	7346895	intron	Wnt6 +	chr2L	7350488	intron	Wnt6 +	chr2L_18_7345001	chr2L_7345001	1182-4H
148	chr2L	7959019	7959054	chr2L	7960455	7960490	pogo	7	1436	6.0	0.5	3.2	1.7	1471	chr2L	7959019	intron	Snoo -	chr2L	7959754	intron	Snoo -	chr2L	7960490	intron	Snoo -	chr2L_7_7955001	chr2L_7955001	1182-4H
151	chr2L	7977082	7977109	chr2L	7984083	7984104	297	9	7000	7.0	7.5	7.2	1.1	7022	chr2L	7977082	intron	Snoo -	chr2L	7980593	intron	Snoo -	chr2L	7984104	intron,5` UTR	Snoo -,CG7231 +	chr2L_9_7980001	chr2L_7980001	1182-4H
161	chr2L	8452419	8452446	chr2L	8461605	8461642	roo	10	9195	2.0	4.0	3.0	2.5	9223	chr2L	8452419	intron	fu12 -	chr2L	8457030	intron	fu12 -	chr2L	8461642	intron	fu12 -	chr2L_10_8455001	chr2L_8455001	1182-4H
167	chr2L	8594447	8594485	chr2L	8601526	8601559	297	7	7076	3.5	1.0	2.2	2.2	7112	chr2L	8594447	intron,3` UTR	Sema-1a +,CR43855 -	chr2L	8598003	intron	Sema-1a +	chr2L	8601559	intron	Sema-1a +	chr2L_7_8595001	chr2L_8595001	1182-4H
170	chr2L	8723106	8723136	chr2L	8731508	8731538	Tirant	12	8402	4.0	2.0	3.0	3.0	8432	chr2L	8723106	intron	raw -	chr2L	8727322	intron	raw -	chr2L	8731538	intron	raw -	chr2L_12_8725001	chr2L_8725001	1182-4H
180	chr2L	9000261	9000304	chr2L	9007796	9007839	roo	13	7535	3.5	5.0	4.2	2.5	7578	chr2L	9000261	intergenic	Try29F +	chr2L	9004050	intergenic	not near genes	chr2L	9007839	intergenic	not near genes	chr2L_13_9000001	chr2L_9000001	1182-4H
199	chr2L	9393489	9393522	chr2L	9396478	9396514	jockey	7	2992	1.0	4.5	2.8	1.8	3025	chr2L	9393489	intron	Shawl -	chr2L	9395002	intron	Shawl -	chr2L	9396514	intron	Shawl -	chr2L_7_9395001	chr2L_9395001	1182-4H
207	chr2L	9973701	9973758	chr2L	9980845	9980902	HMS-Beagle	25	7140	5.0	4.0	4.5	4.5	7201	chr2L	9973701	intergenic	not near genes	chr2L	9977302	intergenic	not near genes	chr2L	9980902	intergenic	not near genes	chr2L_25_9975001	chr2L_9975001	1182-4H
211	chr2L	10138167	10138190	chr2L	10143435	10143459	Rt1c	7	5266	5.0	13.5	9.2	0.7	5292	chr2L	10138167	intron	CG44153 -	chr2L	10140813	intron	CG44153 -	chr2L	10143459	intron	CG44153 -	chr2L_7_10140001	chr2L_10140001	1182-4H
213	chr2L	10156302	10156330	chr2L	10163797	10163822	blood	5	7494	3.0	5.0	4.0	1.0	7520	chr2L	10156302	intron,3` UTR	CG44153 -,CG4839 +	chr2L	10160062	intron	CG44153 -	chr2L	10163822	intron	CG44153 -	chr2L_5_10160001	chr2L_10160001	1182-4H
233	chr2L	10862842	10862853	chr2L	10864461	10864492	Rt1c	4	1633	8.0	7.5	7.8	0.5	1650	chr2L	10862842	3` UTR	CR43807 -	chr2L	10863667	intron	CR43807 -	chr2L	10864492	3` UTR	CR43807 -	chr2L_4_10860001	chr2L_10860001	1182-4H
234	chr2L	10862857	10862876	chr2L	10864450	10864473	Rt1c	11	1621	5.5	4.5	5.0	1.8	1616	chr2L	10862857	3` UTR	CR43807 -	chr2L	10863665	intron	CR43807 -	chr2L	10864473	3` UTR	CR43807 -	chr2L_11_10860001	chr2L_10860001	1182-4H
236	chr2L	10946928	10946947	chr2L	10956167	10956187	roo	7	9236	13.0	6.0	9.5	0.7	9259	chr2L	10946928	intron	dpr2 -	chr2L	10951558	intron	dpr2 -	chr2L	10956187	intron	dpr2 -	chr2L_7_10950001	chr2L_10950001	1182-4H
237	chr2L	10946949	10946972	chr2L	10956157	10956212	roo	15	9236	8.0	4.5	6.2	2.1	9263	chr2L	10946949	intron	dpr2 -	chr2L	10951580	intron	dpr2 -	chr2L	10956212	intron	dpr2 -	chr2L_15_10950001	chr2L_10950001	1182-4H
243	chr2L	11315244	11315271	chr2L	11317673	11317695	G2	7	2428	5.0	3.0	4.0	1.4	2451	chr2L	11315244	intergenic	not near genes	chr2L	11316470	intergenic	not near genes	chr2L	11317695	intergenic	not near genes	chr2L_7_11315001	chr2L_11315001	1182-4H
248	chr2L	11563620	11563654	chr2L	11568849	11568883	copia	9	5228	7.0	4.5	5.8	1.3	5263	chr2L	11563620	intergenic	not near genes	chr2L	11566252	intergenic	not near genes	chr2L	11568883	intergenic	not near genes	chr2L_9_11565001	chr2L_11565001	1182-4H
250	chr2L	11614068	11614081	chr2L	11615547	11615601	hopper2	7	1502	3.0	0.5	1.8	2.5	1533	chr2L	11614068	intron	kek2 +	chr2L	11614834	intron	kek2 +	chr2L	11615601	intron	kek2 +	chr2L_7_11610001	chr2L_11610001	1182-4H
254	chr2L	11713481	11713536	chr2L	11720974	11721028	blood	17	7490	2.5	3.0	2.8	4.5	7547	chr2L	11713481	intergenic	not near genes	chr2L	11717254	intergenic	not near genes	chr2L	11721028	intergenic	CR44143 +	chr2L_17_11715001	chr2L_11715001	1182-4H
267	chr2L	12558294	12558350	chr2L	12565448	12565504	HMS-Beagle	4	7154	1.0	0.5	0.8	2.2	7210	chr2L	12558294	intergenic	not near genes	chr2L	12561899	intergenic	not near genes	chr2L	12565504	intergenic	not near genes	chr2L_4_12560001	chr2L_12560001	1182-4H
272	chr2L	12728897	12728949	chr2L	12729162	12729214	pogo	5	265	1.5	3.0	2.2	1.6	317	chr2L	12728897	intron	MRP +	chr2L	12729056	intron	MRP +	chr2L	12729214	exon	MRP +	chr2L_5_12725001	chr2L_12725001	1182-4H
273	chr2L	12731034	12731087	chr2L	12735825	12735879	F-element	15	4792	3.5	3.0	3.2	3.6	4845	chr2L	12731034	intron	MRP +	chr2L	12733456	intron	MRP +	chr2L	12735879	intron	MRP +	chr2L_15_12730001	chr2L_12730001	1182-4H
276	chr2L	12739162	12739197	chr2L	12743967	12743987	Doc	15	4805	5.0	5.0	5.0	2.5	4825	chr2L	12739162	exon	MRP +	chr2L	12741574	intron	MRP +	chr2L	12743987	exon	MRP +	chr2L_15_12740001	chr2L_12740001	1182-4H
278	chr2L	12781779	12781803	chr2L	12789247	12789271	Quasimodo	7	7464	13.5	4.0	8.8	0.7	7492	chr2L	12781779	intergenic	not near genes	chr2L	12785525	intergenic	not near genes	chr2L	12789271	intergenic	not near genes	chr2L_7_12785001	chr2L_12785001	1182-4H
279	chr2L	12791608	12791624	chr2L	12795305	12795313	F-element	4	3696	2.0	4.5	3.2	1.0	3705	chr2L	12791608	intergenic	not near genes	chr2L	12793460	intergenic	not near genes	chr2L	12795313	intergenic	not near genes	chr2L_4_12790001	chr2L_12790001	1182-4H
281	chr2L	12861672	12861721	chr2L	12863164	12863203	hobo	13	1487	3.5	2.5	3.0	3.2	1531	chr2L	12861672	intergenic	not near genes	chr2L	12862438	intergenic	not near genes	chr2L	12863203	intergenic	not near genes	chr2L_13_12860001	chr2L_12860001	1182-4H
282	chr2L	12894010	12894020	chr2L	12895501	12895512	hobo	5	1491	15.5	10.0	12.8	0.4	1502	chr2L	12894010	intergenic	not near genes	chr2L	12894761	intergenic	not near genes	chr2L	12895512	intergenic	not near genes	chr2L_5_12890001	chr2L_12890001	1182-4H
283	chr2L	12894023	12894048	chr2L	12895489	12895491	hobo	7	1477	6.5	7.0	6.8	0.9	1468	chr2L	12894023	intergenic	not near genes	chr2L	12894757	intergenic	not near genes	chr2L	12895491	intergenic	not near genes	chr2L_7_12890001	chr2L_12890001	1182-4H
284	chr2L	12933827	12933879	chr2L	12941319	12941371	blood	16	7491	3.5	4.5	4.0	3.2	7544	chr2L	12933827	intergenic	not near genes	chr2L	12937599	intergenic	not near genes	chr2L	12941371	intergenic	not near genes	chr2L_16_12935001	chr2L_12935001	1182-4H
289	chr2L	13036229	13036266	chr2L	13036496	13036533	X-element	13	267	6.5	2.5	4.5	2.4	304	chr2L	13036229	intron	CG9932 -	chr2L	13036381	intron	CG9932 -	chr2L	13036533	intron	CG9932 -	chr2L_13_13035001	chr2L_13035001	1182-4H
296	chr2L	13405632	13405660	chr2L	13410453	13410482	Doc	13	4822	10.5	5.0	7.8	1.5	4850	chr2L	13405632	exon	CG7110 +	chr2L	13408057	intron	CG7110 +	chr2L	13410482	intron	CG7110 +	chr2L_13_13405001	chr2L_13405001	1182-4H
297	chr2L	13449461	13449495	chr2L	13456922	13456956	Quasimodo	6	7461	2.5	6.5	4.5	1.1	7495	chr2L	13449461	intron,5` UTR	CG42784 +,Hsp60D -	chr2L	13453208	intron	CG42784 +	chr2L	13456956	intron	CG42784 +	chr2L_6_13450001	chr2L_13450001	1182-4H
298	chr2L	13481433	13481469	chr2L	13482065	13482101	jockey	13	632	6.5	11.0	8.8	1.3	668	chr2L	13481433	intron	CG42784 +	chr2L	13481767	intron	CG42784 +	chr2L	13482101	intron	CG42784 +	chr2L_13_13480001	chr2L_13480001	1182-4H
299	chr2L	13560383	13560420	chr2L	13565229	13565266	F-element	8	4846	1.5	2.0	1.8	2.9	4883	chr2L	13560383	intron	kuz +	chr2L	13562824	intron	kuz +	chr2L	13565266	intron	kuz +	chr2L_8_13560001	chr2L_13560001	1182-4H
303	chr2L	13761802	13761821	chr2L	13762927	13762947	Doc	5	1132	5.0	3.5	4.2	1.0	1145	chr2L	13761802	intron	TM9SF4 +	chr2L	13762374	intron	TM9SF4 +	chr2L	13762947	intron	TM9SF4 +	chr2L_5_13760001	chr2L_13760001	1182-4H
308	chr2L	13853078	13853113	chr2L	13862253	13862288	roo	12	9174	2.0	7.5	4.8	2.1	9210	chr2L	13853078	intron	CenG1A +	chr2L	13857683	intron	CenG1A +	chr2L	13862288	intron	CenG1A +	chr2L_12_13855001	chr2L_13855001	1182-4H
322	chr2L	14642545	14642552	chr2L	14651733	14651738	roo	4	9188	10.5	2.0	6.2	0.6	9193	chr2L	14642545	intron	osp -	chr2L	14647142	intron	osp -	chr2L	14651738	intron	osp -	chr2L_4_14645001	chr2L_14645001	1182-4H
326	chr2L	14803855	14803909	chr2L	14809083	14809137	copia	14	5226	3.0	4.5	3.8	2.9	5282	chr2L	14803855	intergenic	not near genes	chr2L	14806496	intergenic	not near genes	chr2L	14809137	intergenic	not near genes	chr2L_14_14805001	chr2L_14805001	1182-4H
329	chr2L	14889932	14889982	chr2L	14890382	14890432	jockey	11	449	3.0	1.5	2.2	3.4	500	chr2L	14889932	intergenic	not near genes	chr2L	14890182	intergenic	not near genes	chr2L	14890432	intergenic	not near genes	chr2L_11_14890001	chr2L_14890001	1182-4H
332	chr2L	14984364	14984403	chr2L	14991991	14992030	opus	4	7627	2.5	4.0	3.2	1.0	7666	chr2L	14984364	intron	mol -	chr2L	14988197	intron	mol -	chr2L	14992030	intron	mol -	chr2L_4_14985001	chr2L_14985001	1182-4H
348	chr2L	15446026	15446074	chr2L	15453520	15453567	blood	9	7493	3.5	2.0	2.8	2.4	7541	chr2L	15446026	intergenic	not near genes	chr2L	15449796	intergenic	not near genes	chr2L	15453567	intergenic	not near genes	chr2L_9_15445001	chr2L_15445001	1182-4H
351	chr2L	15586389	15586437	chr2L	15593466	15593513	297	5	7077	0.5	2.5	1.5	2.0	7124	chr2L	15586389	intergenic	not near genes	chr2L	15589951	intergenic	not near genes	chr2L	15593513	intergenic	not near genes	chr2L_5_15585001	chr2L_15585001	1182-4H
356	chr2L	15956041	15956057	chr2L	15957498	15957549	hobo	5	1472	2.5	3.0	2.8	1.3	1508	chr2L	15956041	intron	beat-Ib -	chr2L	15956795	intron	beat-Ib -	chr2L	15957549	intron	beat-Ib -	chr2L_5_15955001	chr2L_15955001	1182-4H
361	chr2L	16071771	16071771	chr2L	16217660	16217660	copia	31	145889	17.0	17.5	17.2	1.7	145889	chr2L	16071771	intron	beat-Ia +	chr2L	16144716	intergenic	not near genes	chr2L	16217660	intergenic	not near genes	chr2L_31_16140001	chr2L_16140001	1182-4H
364	chr2L	16141170	16141189	chr2L	16146402	16146421	copia	8	5232	0.0	5.0	2.5	2.3	5251	chr2L	16141170	intergenic	not near genes	chr2L	16143796	intergenic	not near genes	chr2L	16146421	intergenic	not near genes	chr2L_8_16140001	chr2L_16140001	1182-4H
365	chr2L	16153713	16153766	chr2L	16160792	16160845	297	16	7079	3.5	5.0	4.2	3.1	7132	chr2L	16153713	intergenic	not near genes	chr2L	16157279	intergenic	not near genes	chr2L	16160845	intergenic	not near genes	chr2L_16_16155001	chr2L_16155001	1182-4H
369	chr2L	16071771	16071771	chr2L	16217660	16217660	copia	32	145889	17.0	17.5	17.2	1.8	145889	chr2L	16071771	intron	beat-Ia +	chr2L	16144716	intergenic	not near genes	chr2L	16217660	intergenic	not near genes	chr2L_32_16140001	chr2L_16140001	1182-4H
370	chr2L	16280236	16280287	chr2L	16281427	16281467	1360	16	1190	5.0	2.0	3.5	3.6	1231	chr2L	16280236	intron	crp -	chr2L	16280852	intron	crp -	chr2L	16281467	intron	crp -	chr2L_16_16280001	chr2L_16280001	1182-4H
382	chr2L	16813715	16813727	chr2L	16813812	16813812	roo	9	98	11.0	5.0	8.0	1.0	97	chr2L	16813715	intron,exon	CG13280 -,CG13272 +	chr2L	16813764	intron,exon	CG13280 -,CG13272 +	chr2L	16813812	intron,exon	CG13280 -,CG13272 +	chr2L_9_16810001	chr2L_16810001	1182-4H
384	chr2L	16958089	16958123	chr2L	16962902	16962931	Doc	8	4812	2.5	5.0	3.8	1.7	4842	chr2L	16958089	intergenic	not near genes	chr2L	16960510	intergenic	not near genes	chr2L	16962931	intergenic	not near genes	chr2L_8_16960001	chr2L_16960001	1182-4H
389	chr2L	17167542	17167571	chr2L	17167807	17167837	pogo	9	266	4.5	1.5	3.0	2.2	295	chr2L	17167542	intron,intron	CG34106 +,beat-IIIa +	chr2L	17167690	intron,intron	CG34106 +,beat-IIIa +	chr2L	17167837	intron,intron	CG34106 +,beat-IIIa +	chr2L_9_17165001	chr2L_17165001	1182-4H
390	chr2L	17199149	17199188	chr2L	17200641	17200680	hobo	7	1492	1.5	3.0	2.2	2.2	1531	chr2L	17199149	intron	beat-IIIc -	chr2L	17199914	intron	beat-IIIc -	chr2L	17200680	intron	beat-IIIc -	chr2L_7_17195001	chr2L_17195001	1182-4H
391	chr2L	17273180	17273222	chr2L	17277983	17278030	F-element	14	4805	3.5	3.0	3.2	3.3	4850	chr2L	17273180	intergenic	not near genes	chr2L	17275605	intergenic	not near genes	chr2L	17278030	intergenic	not near genes	chr2L_14_17275001	chr2L_17275001	1182-4H
400	chr2L	17819899	17819948	chr2L	17825127	17825176	copia	13	5228	4.0	2.5	3.2	3.1	5277	chr2L	17819899	intron	CadN2 -	chr2L	17822538	intron	CadN2 -	chr2L	17825176	intron	CadN2 -	chr2L_13_17820001	chr2L_17820001	1182-4H
402	chr2L	17911934	17911987	chr2L	17914145	17914181	pogo	15	2208	3.5	3.0	3.2	3.6	2247	chr2L	17911934	intergenic	not near genes	chr2L	17913058	intergenic	not near genes	chr2L	17914181	intergenic	CG43271 -	chr2L_15_17910001	chr2L_17910001	1182-4H
404	chr2L	17951929	17951978	chr2L	17953421	17953470	hobo	11	1492	2.0	3.5	2.8	2.9	1541	chr2L	17951929	intergenic	CR44398 -,CR44397 -	chr2L	17952700	intergenic	not near genes	chr2L	17953470	intergenic	not near genes	chr2L_11_17950001	chr2L_17950001	1182-4H
411	chr2L	18051857	18051903	chr2L	18061029	18061075	roo	9	9167	3.5	5.5	4.5	1.6	9218	chr2L	18051857	intron	rdo +	chr2L	18056466	intron	rdo +	chr2L	18061075	intron	rdo +	chr2L_9_18055001	chr2L_18055001	1182-4H
418	chr2L	18408005	18408052	chr2L	18412813	18412861	Doc	12	4808	2.0	1.0	1.5	4.8	4856	chr2L	18408005	intergenic	not near genes	chr2L	18410433	intergenic	not near genes	chr2L	18412861	intergenic	not near genes	chr2L_12_18410001	chr2L_18410001	1182-4H
428	chr2L	19147344	19147391	chr2L	19154404	19154451	297	7	7059	2.5	3.0	2.8	1.8	7107	chr2L	19147344	intron	brat +	chr2L	19150898	intron	brat +	chr2L	19154451	intron	brat +	chr2L_7_19150001	chr2L_19150001	1182-4H
434	chr2L	19345006	19345045	chr2L	19357240	19357268	blood	10	12231	1.5	5.5	3.5	2.2	12262	chr2L	19345006	intron	dnt -	chr2L	19351137	intron	dnt -	chr2L	19357268	intron	dnt -	chr2L_10_19350001	chr2L_19350001	1182-4H
445	chr2L	19620070	19620130	chr2L	19621084	19621119	jockey	27	1012	4.5	6.0	5.2	4.4	1049	chr2L	19620070	intron	Lar +	chr2L	19620594	intron	Lar +	chr2L	19621119	intron	Lar +	chr2L_27_19620001	chr2L_19620001	1182-4H
447	chr2L	19652548	19652584	chr2L	19674009	19674035	opus	6	21456	3.5	3.5	3.5	1.3	21487	chr2L	19652548	intron	Lar +	chr2L	19663292	intron	Lar +	chr2L	19674035	intron	Lar +	chr2L_6_19660001	chr2L_19660001	1182-4H
449	chr2L	19703515	19703567	chr2L	19712676	19712728	roo	15	9160	2.5	3.5	3.0	3.8	9213	chr2L	19703515	intron	Lar +	chr2L	19708122	intron	Lar +	chr2L	19712728	intron	Lar +	chr2L_15_19705001	chr2L_19705001	1182-4H
450	chr2L	19737355	19737383	chr2L	19740821	19740838	1360	9	3463	5.5	0.5	3.0	2.2	3483	chr2L	19737355	intergenic	Nf-YB +	chr2L	19739096	intergenic	not near genes	chr2L	19740838	intergenic	not near genes	chr2L_9_19735001	chr2L_19735001	1182-4H
451	chr2L	19762791	19762835	chr2L	19763057	19763102	pogo	9	267	2.5	4.5	3.5	2.0	311	chr2L	19762791	5` UTR	fbp -	chr2L	19762946	intron	fbp -	chr2L	19763102	intron	fbp -	chr2L_9_19760001	chr2L_19760001	1182-4H
460	chr2L	20005852	20005897	chr2L	20010953	20010997	flea	10	5101	3.5	3.5	3.5	2.2	5145	chr2L	20005852	intron	CG43861 -	chr2L	20008424	intron	CG43861 -	chr2L	20010997	intron	CG43861 -	chr2L_10_20005001	chr2L_20005001	1182-4H
462	chr2L	20272094	20272136	chr2L	20282829	20282872	copia	16	10736	2.0	2.5	2.2	5.0	10778	chr2L	20272094	intergenic	not near genes	chr2L	20277483	intergenic	not near genes	chr2L	20282872	intergenic	not near genes	chr2L_16_20275001	chr2L_20275001	1182-4H
466	chr2L	20303167	20303182	chr2L	20310649	20310674	blood	4	7490	2.5	3.5	3.0	1.0	7507	chr2L	20303167	intergenic	not near genes	chr2L	20306920	intergenic	not near genes	chr2L	20310674	intergenic	not near genes	chr2L_4_20305001	chr2L_20305001	1182-4H
474	chr2L	20568635	20568681	chr2L	20569050	20569096	X-element	12	415	4.5	2.0	3.2	2.9	461	chr2L	20568635	intron	CR45347 +	chr2L	20568866	intron	CR45347 +	chr2L	20569096	intron	CR45347 +	chr2L_12_20565001	chr2L_20565001	1182-4H
476	chr2L	20576195	20576237	chr2L	20583688	20583730	blood	10	7491	2.0	5.0	3.5	2.2	7535	chr2L	20576195	intergenic	CR45347 +	chr2L	20579962	intergenic	not near genes	chr2L	20583730	3` UTR	CR44909 -	chr2L_10_20575001	chr2L_20575001	1182-4H
484	chr2L	20835806	20835826	chr2L	20836533	20836567	Quasimodo	4	738	2.0	2.5	2.2	1.2	761	chr2L	20835806	5` UTR	Oseg5 -	chr2L	20836186	intergenic	Oseg5 -,Spn38F -	chr2L	20836567	intergenic	Spn38F -	chr2L_4_20835001	chr2L_20835001	1182-4H
485	chr2L	20891522	20891542	chr2L	20896648	20896668	jockey	4	5126	2.0	4.5	3.2	1.0	5146	chr2L	20891522	intron,intron	CG43739 -,sky -	chr2L	20894095	intron,intron	CG43739 -,sky -	chr2L	20896668	intron,intron	CG43739 -,sky -	chr2L_4_20890001	chr2L_20890001	1182-4H
487	chr2L	20976632	20976672	chr2L	20981467	20981510	X-element	8	4838	3.0	3.5	3.2	1.9	4878	chr2L	20976632	intron	CG42238 -	chr2L	20979071	intron	CG42238 -	chr2L	20981510	intron	CG42238 -	chr2L_8_20975001	chr2L_20975001	1182-4H
488	chr2L	21020252	21020299	chr2L	21023954	21024001	NOF	14	3701	3.0	3.0	3.0	3.5	3749	chr2L	21020252	intron	CG42238 -	chr2L	21022126	intron	CG42238 -	chr2L	21024001	intron	CG42238 -	chr2L_14_21020001	chr2L_21020001	1182-4H
489	chr2L	21041136	21041162	chr2L	21049422	21049448	Tirant	5	8285	3.5	3.0	3.2	1.2	8312	chr2L	21041136	intron	CG42238 -	chr2L	21045292	intron	CG42238 -	chr2L	21049448	intron	CG42238 -	chr2L_5_21045001	chr2L_21045001	1182-4H
496	chr2L	21347528	21347561	chr2L	21355025	21355058	blood	7	7497	3.0	1.5	2.2	2.2	7530	chr2L	21347528	intron	Tsp39D +	chr2L	21351293	intron	Tsp39D +	chr2L	21355058	intron	Tsp39D +	chr2L_7_21350001	chr2L_21350001	1182-4H
500	chr2L	21597029	21597057	chr2L	21604798	21604826	roo	4	7769	3.5	1.5	2.5	1.1	7797	chr2L	21597029	intergenic	not near genes	chr2L	21600928	intergenic	not near genes	chr2L	21604826	intergenic	not near genes	chr2L_4_21600001	chr2L_21600001	1182-4H
501	chr2L	21691805	21691832	chr2L	21698300	21698327	Burdock	9	6495	5.5	0.0	2.8	2.4	6522	chr2L	21691805	intron	CG31619 +	chr2L	21695066	intron	CG31619 +	chr2L	21698327	intron	CG31619 +	chr2L_9_21695001	chr2L_21695001	1182-4H
509	chr2L	21981665	21981715	chr2L	21990855	21990885	roo	14	9188	2.5	7.0	4.8	2.4	9220	chr2L	21981665	exon	CG2528 -	chr2L	21986275	intron	CG2528 -	chr2L	21990885	exon	CG2528 -	chr2L_14_21985001	chr2L_21985001	1182-4H
517	chr2L	22258596	22258641	chr2L	22260745	22260790	G6	12	2149	3.5	5.5	4.5	2.2	2194	chr2L	22258596	intergenic	Tif-IA +	chr2L	22259693	intergenic	not near genes	chr2L	22260790	intergenic	not near genes	chr2L_12_22255001	chr2L_22255001	1182-4H
520	chr2L	22581955	22581988	chr2L	22583759	22583802	S-element	4	1812	2.5	1.5	2.0	1.3	1847	chr2L	22581955	intron	CG17494 +	chr2L	22582878	intron	CG17494 +	chr2L	22583802	intron	CG17494 +	chr2L_4_22580001	chr2L_22580001	1182-4H
522	chr2L	22776405	22776447	chr2L	22778219	22778261	S-element	13	1812	2.5	5.0	3.8	2.7	1856	chr2L	22776405	intergenic	not near genes	chr2L	22777333	intergenic	not near genes	chr2L	22778261	intergenic	not near genes	chr2L_13_22775001	chr2L_22775001	1182-4H
524	chr2R	469945	469972	chr2R	473211	473238	F-element	4	3265	5.5	2.0	3.8	0.8	3293	chr2R	469945	intergenic	not near genes	chr2R	471592	intergenic	not near genes	chr2R	473238	intergenic	not near genes	chr2R_4_470001	chr2R_470001	1182-4H
525	chr2R	529317	529354	chr2R	537967	537967	Max-element	11	8645	2.0	7.5	4.8	1.9	8650	chr2R	529317	intron	CG40378 +	chr2R	533642	intron	CG40378 +	chr2R	537967	intron	CG40378 +	chr2R_11_530001	chr2R_530001	1182-4H
526	chr2R	1082372	1082384	chr2R	1087133	1087185	Doc	5	4775	4.5	4.5	4.5	0.9	4813	chr2R	1082372	intron	rl +	chr2R	1084778	intron	rl +	chr2R	1087185	intron	rl +	chr2R_5_1080001	chr2R_1080001	1182-4H
527	chr2R	1516589	1516600	chr2R	1521342	1521353	1731	12	4753	22.0	23.5	22.8	0.5	4764	chr2R	1516589	exon	Maf1 -	chr2R	1518971	intron	Maf1 -	chr2R	1521353	5` UTR	Maf1 -	chr2R_12_1515001	chr2R_1515001	1182-4H
528	chr2R	2498963	2499013	chr2R	2508135	2508185	roo	6	9171	3.0	2.0	2.5	1.7	9222	chr2R	2498963	intron	MFS17 -	chr2R	2503574	intron	MFS17 -	chr2R	2508185	intron	MFS17 -	chr2R_6_2500001	chr2R_2500001	1182-4H
529	chr2R	1373053	1373073	chr2R	2589326	2589346	Cr1a	4	1216273	10.5	12.5	11.5	0.3	1216293	chr2R	1373053	intron	l(2)41Ab +	chr2R	1981200	intron	CG17684 -	chr2R	2589346	intergenic	not near genes	chr2R_4_1980001	chr2R_1980001	1182-4H
537	chr2R	4838847	4838894	chr2R	4840395	4840442	transib2	10	1548	3.5	4.5	4.0	2.0	1595	chr2R	4838847	intergenic	not near genes	chr2R	4839644	intergenic	not near genes	chr2R	4840442	intergenic	not near genes	chr2R_10_4835001	chr2R_4835001	1182-4H
538	chr2R	4870721	4870743	chr2R	4871257	4871277	R1A1-element	4	536	4.5	4.5	4.5	0.7	556	chr2R	4870721	intergenic	not near genes	chr2R	4870999	intergenic	not near genes	chr2R	4871277	intergenic	not near genes	chr2R_4_4870001	chr2R_4870001	1182-4H
541	chr2R	4918125	4918169	chr2R	4924323	4924367	aurora-element	9	6198	11.5	26.5	19.0	0.5	6242	chr2R	4918125	intron	Ir41a +	chr2R	4921246	intron	Ir41a +	chr2R	4924367	intron	Ir41a +	chr2R_9_4920001	chr2R_4920001	1182-4H
554	chr2R	5417971	5418015	chr2R	5420628	5420672	Burdock	5	2657	4.0	0.5	2.2	1.6	2701	chr2R	5417971	intron	laccase2 +	chr2R	5419322	intron	laccase2 +	chr2R	5420672	intron	laccase2 +	chr2R_5_5415001	chr2R_5415001	1182-4H
558	chr2R	5869266	5869302	chr2R	5874367	5874403	flea	9	5100	5.5	4.0	4.8	1.6	5137	chr2R	5869266	intergenic	not near genes	chr2R	5871834	intergenic	not near genes	chr2R	5874403	intergenic	not near genes	chr2R_9_5870001	chr2R_5870001	1182-4H
559	chr2R	5902140	5902192	chr2R	5909724	5909776	17.6	12	7581	2.5	2.5	2.5	3.4	7636	chr2R	5902140	intron	CG43366 +	chr2R	5905958	intron	CG43366 +	chr2R	5909776	intron	CG43366 +	chr2R_12_5905001	chr2R_5905001	1182-4H
560	chr2R	5939658	5939665	chr2R	5940874	5940887	INE-1	9	1220	2.0	8.5	5.2	1.5	1229	chr2R	5939658	intergenic	not near genes	chr2R	5940272	intergenic	not near genes	chr2R	5940887	intergenic	not near genes	chr2R_9_5940001	chr2R_5940001	1182-4H
563	chr2R	6096697	6096750	chr2R	6101920	6101961	BS	12	5217	4.5	9.5	7.0	1.5	5264	chr2R	6096697	intron	EcR -	chr2R	6099329	intron	EcR -	chr2R	6101961	intron	EcR -	chr2R_12_6095001	chr2R_6095001	1182-4H
568	chr2R	6494515	6494548	chr2R	6499297	6499335	F-element	4	4786	3.5	1.5	2.5	1.1	4820	chr2R	6494515	intergenic	not near genes	chr2R	6496925	intergenic	not near genes	chr2R	6499335	intergenic	not near genes	chr2R_4_6495001	chr2R_6495001	1182-4H
573	chr2R	6579751	6579796	chr2R	6584862	6584907	flea	11	5111	4.5	4.5	4.5	2.0	5156	chr2R	6579751	intron	jing +	chr2R	6582329	intron	jing +	chr2R	6584907	intron	jing +	chr2R_11_6580001	chr2R_6580001	1182-4H
586	chr2R	6952153	6952177	chr2R	6959748	6959781	opus	7	7602	5.5	2.0	3.8	1.5	7628	chr2R	6952153	intron,intron,exon	mim -,CheB42c -,ppk25 +	chr2R	6955967	intron,intron	mim -,CheB42c -	chr2R	6959781	intron,intron	mim -,CheB42c -	chr2R_7_6955001	chr2R_6955001	1182-4H
591	chr2R	7196548	7196587	chr2R	7201348	7201387	F-element	6	4799	1.5	1.5	1.5	2.4	4839	chr2R	7196548	intron	pk +	chr2R	7198968	intron	pk +	chr2R	7201387	intron	pk +	chr2R_6_7195001	chr2R_7195001	1182-4H
592	chr2R	7209859	7209874	chr2R	7217644	7217660	roo	5	7786	2.5	3.0	2.8	1.3	7801	chr2R	7209859	intron	pk +	chr2R	7213760	intron	pk +	chr2R	7217660	intron	pk +	chr2R_5_7210001	chr2R_7210001	1182-4H
593	chr2R	7235803	7235842	chr2R	7240920	7240959	jockey	9	5116	3.5	3.0	3.2	2.1	5156	chr2R	7235803	intergenic	not near genes	chr2R	7238381	intergenic	not near genes	chr2R	7240959	intergenic	not near genes	chr2R_9_7235001	chr2R_7235001	1182-4H
594	chr2R	7262187	7262214	chr2R	7269261	7269292	297	5	7081	3.0	4.0	3.5	1.1	7105	chr2R	7262187	intergenic	not near genes	chr2R	7265740	intergenic	not near genes	chr2R	7269292	intergenic	not near genes	chr2R_5_7265001	chr2R_7265001	1182-4H
597	chr2R	7434875	7434898	chr2R	7439201	7439224	Juan	5	4326	3.5	6.0	4.8	0.9	4349	chr2R	7434875	intergenic	so +	chr2R	7437050	intergenic	not near genes	chr2R	7439224	intergenic	not near genes	chr2R_5_7435001	chr2R_7435001	1182-4H
601	chr2R	7608388	7608438	chr2R	7613616	7613665	I-element	9	5228	0.5	0.0	0.2	7.5	5277	chr2R	7608388	intron	CG1358 -	chr2R	7611026	intron	CG1358 -	chr2R	7613665	intron	CG1358 -	chr2R_9_7610001	chr2R_7610001	1182-4H
602	chr2R	7815654	7815699	chr2R	7822142	7822193	Burdock	13	6494	3.0	2.0	2.5	3.7	6539	chr2R	7815654	intergenic	CG1882 +	chr2R	7818924	intergenic	not near genes	chr2R	7822193	3` UTR	cathD -	chr2R_13_7815001	chr2R_7815001	1182-4H
603	chr2R	7869166	7869209	chr2R	7873977	7874020	Doc	11	4811	6.0	4.0	5.0	1.8	4854	chr2R	7869166	intron	Dgk -	chr2R	7871593	intron	Dgk -	chr2R	7874020	intron	Dgk -	chr2R_11_7870001	chr2R_7870001	1182-4H
609	chr2R	8160916	8160946	chr2R	8161026	8161051	1360	17	113	7.0	9.0	8.0	1.9	135	chr2R	8160916	exon	CG8708 -	chr2R	8160984	intron	CG8708 -	chr2R	8161051	intron	CG8708 -	chr2R_17_8160001	chr2R_8160001	1182-4H
612	chr2R	8330844	8330876	chr2R	8331355	8331387	roo	11	511	6.0	3.0	4.5	2.0	543	chr2R	8330844	intron	pdm3 +	chr2R	8331116	intron	pdm3 +	chr2R	8331387	intron	pdm3 +	chr2R_11_8330001	chr2R_8330001	1182-4H
614	chr2R	8398189	8398241	chr2R	8402995	8403047	Doc	15	4805	6.5	4.5	5.5	2.3	4858	chr2R	8398189	intron	CG2121 -	chr2R	8400618	intron	CG2121 -	chr2R	8403047	intron	CG2121 -	chr2R_15_8400001	chr2R_8400001	1182-4H
615	chr2R	8416298	8416304	chr2R	8417147	8417153	I-element	4	849	8.0	9.5	8.8	0.4	855	chr2R	8416298	intergenic	not near genes	chr2R	8416726	intergenic	CG43296 -	chr2R	8417153	intergenic	CG43296 -	chr2R_4_8415001	chr2R_8415001	1182-4H
620	chr2R	8566038	8566058	chr2R	8567009	8567029	1360	8	971	0.0	8.0	4.0	1.6	991	chr2R	8566038	5` UTR	Cyp6a14 -	chr2R	8566534	5` UTR	Cyp6a14 -	chr2R	8567029	5` UTR	Cyp6a14 -	chr2R_8_8565001	chr2R_8565001	1182-4H
624	chr2R	8722742	8722766	chr2R	8723008	8723032	pogo	11	264	10.5	6.5	8.5	1.2	290	chr2R	8722742	intron	CG14767 -	chr2R	8722887	intron	CG14767 -	chr2R	8723032	intron	CG14767 -	chr2R_11_8720001	chr2R_8720001	1182-4H
625	chr2R	8722771	8722795	chr2R	8723007	8723046	pogo	11	256	4.5	5.5	5.0	1.8	275	chr2R	8722771	intron	CG14767 -	chr2R	8722908	intron	CG14767 -	chr2R	8723046	intron	CG14767 -	chr2R_11_8720001	chr2R_8720001	1182-4H
626	chr2R	8777893	8777941	chr2R	8784109	8784149	diver	7	6215	0.5	6.0	3.2	1.7	6256	chr2R	8777893	intergenic	not near genes	chr2R	8781021	intergenic	not near genes	chr2R	8784149	intergenic	not near genes	chr2R_7_8780001	chr2R_8780001	1182-4H
635	chr2R	9151294	9151330	chr2R	9157774	9157825	Burdock	10	6494	5.5	4.5	5.0	1.7	6531	chr2R	9151294	exon	CG30345 +	chr2R	9154560	intergenic	not near genes	chr2R	9157825	intergenic	CG8008 -	chr2R_10_9150001	chr2R_9150001	1182-4H
636	chr2R	9212671	9212717	chr2R	9213182	9213228	roo	15	507	7.0	9.5	8.2	1.6	557	chr2R	9212671	intergenic	CR45309 +	chr2R	9212950	intergenic	CR45309 +	chr2R	9213228	5` UTR	CR45309 +	chr2R_15_9210001	chr2R_9210001	1182-4H
642	chr2R	9480059	9480092	chr2R	9490615	9490648	roo	5	10556	4.0	3.0	3.5	1.1	10589	chr2R	9480059	intergenic	not near genes	chr2R	9485354	intergenic	not near genes	chr2R	9490648	intergenic	not near genes	chr2R_5_9485001	chr2R_9485001	1182-4H
650	chr2R	9726598	9726628	chr2R	9734174	9734206	17.6	9	7574	5.0	1.5	3.2	2.1	7608	chr2R	9726598	intron	sqa -	chr2R	9730402	intron	sqa -	chr2R	9734206	intron	sqa -	chr2R_9_9730001	chr2R_9730001	1182-4H
653	chr2R	9871016	9871067	chr2R	9871527	9871571	roo	12	510	2.0	3.0	2.5	3.4	555	chr2R	9871016	intron	cbx -	chr2R	9871294	intron	cbx -	chr2R	9871571	intron,5` UTR	cbx -,CG18446 +	chr2R_12_9870001	chr2R_9870001	1182-4H
657	chr2R	9945416	9945465	chr2R	9945637	9945686	BS	5	221	4.5	2.0	3.2	1.2	270	chr2R	9945416	intron	Mef2 -	chr2R	9945551	intron	Mef2 -	chr2R	9945686	intron	Mef2 -	chr2R_5_9945001	chr2R_9945001	1182-4H
659	chr2R	10005838	10005881	chr2R	10007012	10007041	1360	14	1173	4.0	2.0	3.0	3.5	1203	chr2R	10005838	intron	Pka-R2 -	chr2R	10006440	intron	Pka-R2 -	chr2R	10007041	intron	Pka-R2 -	chr2R_14_10005001	chr2R_10005001	1182-4H
663	chr2R	10176860	10176911	chr2R	10186052	10186103	roo	9	9192	1.5	2.0	1.8	3.2	9243	chr2R	10176860	intron	KCNQ -	chr2R	10181482	intron	KCNQ -	chr2R	10186103	intron	KCNQ -	chr2R_9_10180001	chr2R_10180001	1182-4H
683	chr2R	10585574	10585590	chr2R	10594182	10594198	Tirant	6	8607	3.5	10.0	6.8	0.8	8624	chr2R	10585574	intron	psq +	chr2R	10589886	intron	psq +	chr2R	10594198	intron	psq +	chr2R_6_10585001	chr2R_10585001	1182-4H
684	chr2R	10622348	10622355	chr2R	10637138	10637145	mdg1	5	14790	3.5	2.5	3.0	1.2	14797	chr2R	10622348	intron	CG11883 +	chr2R	10629746	intron	CG11883 +	chr2R	10637145	intron	CG11883 +	chr2R_5_10625001	chr2R_10625001	1182-4H
691	chr2R	10979660	10979684	chr2R	10980149	10980179	297	4	494	2.5	3.0	2.8	1.1	519	chr2R	10979660	intergenic	not near genes	chr2R	10979920	intergenic	not near genes	chr2R	10980179	intergenic	not near genes	chr2R_4_10975001	chr2R_10975001	1182-4H
693	chr2R	11019871	11019899	chr2R	11024953	11024990	jockey	6	5088	5.5	6.0	5.8	0.9	5119	chr2R	11019871	intron	luna -	chr2R	11022430	intron	luna -	chr2R	11024990	intron	luna -	chr2R_6_11020001	chr2R_11020001	1182-4H
697	chr2R	11207797	11207844	chr2R	11208015	11208062	BS	7	218	3.5	2.5	3.0	1.8	265	chr2R	11207797	intron	shn +	chr2R	11207930	intron	shn +	chr2R	11208062	intron	shn +	chr2R_7_11205001	chr2R_11205001	1182-4H
700	chr2R	11297615	11297643	chr2R	11301942	11301989	flea	9	4344	4.0	7.0	5.5	1.4	4374	chr2R	11297615	intergenic	CG42336 -	chr2R	11299802	intergenic	not near genes	chr2R	11301989	5` UTR	CG7741 +	chr2R_9_11295001	chr2R_11295001	1182-4H
703	chr2R	11472620	11472673	chr2R	11473844	11473895	pogo	7	1221	4.5	2.5	3.5	1.6	1275	chr2R	11472620	intergenic	not near genes	chr2R	11473258	intergenic	not near genes	chr2R	11473895	intergenic	not near genes	chr2R_7_11470001	chr2R_11470001	1182-4H
719	chr2R	12481146	12481169	chr2R	12482962	12482968	roo	12	1821	4.5	8.0	6.2	1.7	1822	chr2R	12481146	exon	Dh44-R2 +	chr2R	12482057	intron	Dh44-R2 +	chr2R	12482968	intron	Dh44-R2 +	chr2R_12_12480001	chr2R_12480001	1182-4H
720	chr2R	12501668	12501721	chr2R	12503855	12503883	Rt1c	5	2177	5.0	5.0	5.0	0.8	2215	chr2R	12501668	intron	fdl -	chr2R	12502776	intron	fdl -	chr2R	12503883	intron	fdl -	chr2R_5_12500001	chr2R_12500001	1182-4H
725	chr2R	12707524	12707545	chr2R	12715915	12715926	roo	4	8388	2.0	1.0	1.5	1.6	8402	chr2R	12707524	intron	CG42663 +	chr2R	12711725	intron	CG42663 +	chr2R	12715926	intron	CG42663 +	chr2R_4_12710001	chr2R_12710001	1182-4H
727	chr2R	12789268	12789324	chr2R	12797656	12797712	roo	12	8382	5.5	4.0	4.8	2.1	8444	chr2R	12789268	intron,3` UTR	sca +,CR45137 -	chr2R	12793490	intron,intron	sca +,CR45137 -	chr2R	12797712	intron,3` UTR	sca +,CR45137 -	chr2R_12_12790001	chr2R_12790001	1182-4H
728	chr2R	12819429	12819472	chr2R	12824523	12824566	jockey	15	5089	3.5	6.0	4.8	2.6	5137	chr2R	12819429	intergenic	not near genes	chr2R	12821998	intergenic	not near genes	chr2R	12824566	intergenic	not near genes	chr2R_15_12820001	chr2R_12820001	1182-4H
735	chr2R	13136818	13136863	chr2R	13141639	13141686	Doc	20	4821	5.5	4.5	5.0	3.3	4868	chr2R	13136818	exon	Cap-G +	chr2R	13139252	intron	Cap-G +	chr2R	13141686	intron	Cap-G +	chr2R_20_13135001	chr2R_13135001	1182-4H
745	chr2R	13580474	13580522	chr2R	13580849	13580886	jockey	15	374	2.0	6.0	4.0	3.0	412	chr2R	13580474	3` UTR	CG6191 -	chr2R	13580680	3` UTR,3` UTR	CG6191 -,CG45088 -	chr2R	13580886	3` UTR,3` UTR	CG6191 -,CG45088 -	chr2R_15_13580001	chr2R_13580001	1182-4H
749	chr2R	13728104	13728115	chr2R	13735789	13735800	opus	4	7685	5.0	1.5	3.2	1.0	7696	chr2R	13728104	intron	fas +	chr2R	13731952	intron	fas +	chr2R	13735800	intron	fas +	chr2R_4_13730001	chr2R_13730001	1182-4H
756	chr2R	13905586	13905628	chr2R	13907593	13907627	Rt1a	19	2003	6.5	9.5	8.0	2.1	2041	chr2R	13905586	intron	shot -	chr2R	13906606	intron	shot -	chr2R	13907627	intron	shot -	chr2R_19_13905001	chr2R_13905001	1182-4H
762	chr2R	14394214	14394220	chr2R	14399028	14399034	Doc	4	4813	4.0	2.0	3.0	1.0	4820	chr2R	14394214	intergenic	not near genes	chr2R	14396624	intergenic	not near genes	chr2R	14399034	intergenic	not near genes	chr2R_4_14395001	chr2R_14395001	1182-4H
763	chr2R	14467288	14467327	chr2R	14476466	14476510	roo	7	9182	3.0	3.5	3.2	1.7	9222	chr2R	14467288	intergenic	not near genes	chr2R	14471899	intergenic	not near genes	chr2R	14476510	5` UTR	CR44462 +	chr2R_7_14470001	chr2R_14470001	1182-4H
765	chr2R	14497365	14497400	chr2R	14498556	14498591	1360	4	1191	1.5	3.0	2.2	1.2	1226	chr2R	14497365	3` UTR	Cpsf160 -	chr2R	14497978	intron	Cpsf160 -	chr2R	14498591	3` UTR	Cpsf160 -	chr2R_4_14495001	chr2R_14495001	1182-4H
786	chr2R	15004703	15004749	chr2R	15005057	15005103	jockey	8	354	5.0	4.5	4.8	1.4	400	chr2R	15004703	intergenic	not near genes	chr2R	15004903	intergenic	not near genes	chr2R	15005103	intergenic	not near genes	chr2R_8_15000001	chr2R_15000001	1182-4H
787	chr2R	15015460	15015484	chr2R	15022885	15022929	mdg1	5	7441	3.0	2.0	2.5	1.4	7469	chr2R	15015460	intron	hbs +	chr2R	15019194	intron	hbs +	chr2R	15022929	intron	hbs +	chr2R_5_15015001	chr2R_15015001	1182-4H
789	chr2R	15084962	15084996	chr2R	15092030	15092066	297	12	7071	9.0	3.0	6.0	1.7	7104	chr2R	15084962	intergenic	not near genes	chr2R	15088514	intergenic	not near genes	chr2R	15092066	5` UTR	CR44457 +	chr2R_12_15085001	chr2R_15085001	1182-4H
790	chr2R	15119302	15119322	chr2R	15127808	15127828	Tirant	4	8503	7.0	9.5	8.2	0.4	8526	chr2R	15119302	intron	chn +	chr2R	15123565	intron	chn +	chr2R	15127828	intron	chn +	chr2R_4_15120001	chr2R_15120001	1182-4H
791	chr2R	15119324	15119347	chr2R	15127804	15127838	Tirant	10	8495	6.5	8.0	7.2	1.2	8514	chr2R	15119324	intron	chn +	chr2R	15123581	intron	chn +	chr2R	15127838	intron	chn +	chr2R_10_15120001	chr2R_15120001	1182-4H
799	chr2R	16061708	16061717	chr2R	16064366	16064375	Burdock	4	2658	6.0	4.5	5.2	0.6	2667	chr2R	16061708	intergenic	not near genes	chr2R	16063042	intergenic	not near genes	chr2R	16064375	intergenic	not near genes	chr2R_4_16060001	chr2R_16060001	1182-4H
805	chr2R	16539639	16539671	chr2R	16544873	16544897	copia	6	5232	2.5	2.5	2.5	1.7	5258	chr2R	16539639	intergenic	not near genes	chr2R	16542268	intergenic	not near genes	chr2R	16544897	intergenic	not near genes	chr2R_6_16540001	chr2R_16540001	1182-4H
814	chr2R	18045646	18045702	chr2R	18046023	18046079	jockey	9	377	3.0	1.5	2.2	2.8	433	chr2R	18045646	intergenic	not near genes	chr2R	18045862	intergenic	not near genes	chr2R	18046079	intergenic	CG5767 -	chr2R_9_18045001	chr2R_18045001	1182-4H
818	chr2R	18358368	18358413	chr2R	18372605	18372650	roo	12	14236	2.5	5.0	3.8	2.5	14282	chr2R	18358368	intergenic	not near genes	chr2R	18365509	intergenic	not near genes	chr2R	18372650	intergenic	not near genes	chr2R_12_18365001	chr2R_18365001	1182-4H
827	chr2R	18575782	18575807	chr2R	18581995	18582019	3S18	4	6213	5.0	8.0	6.5	0.5	6237	chr2R	18575782	intron	GEFmeso -	chr2R	18578900	intron	GEFmeso -	chr2R	18582019	intron	GEFmeso -	chr2R_4_18575001	chr2R_18575001	1182-4H
828	chr2R	18575808	18575829	chr2R	18581986	18582042	3S18	17	6198	3.5	7.0	5.2	2.7	6234	chr2R	18575808	intron	GEFmeso -	chr2R	18578925	intron	GEFmeso -	chr2R	18582042	intron	GEFmeso -	chr2R_17_18575001	chr2R_18575001	1182-4H
829	chr2R	18590845	18590895	chr2R	18600022	18600072	roo	14	9176	3.5	4.5	4.0	2.8	9227	chr2R	18590845	intron	GEFmeso -	chr2R	18595458	intron	GEFmeso -	chr2R	18600072	intron	GEFmeso -	chr2R_14_18595001	chr2R_18595001	1182-4H
862	chr2R	19715833	19715855	chr2R	19723327	19723349	blood	9	7491	7.0	9.5	8.2	1.0	7516	chr2R	19715833	intergenic	not near genes	chr2R	19719591	intergenic	not near genes	chr2R	19723349	intergenic	not near genes	chr2R_9_19715001	chr2R_19715001	1182-4H
863	chr2R	19776570	19776615	chr2R	19779918	19779963	jockey	12	3346	2.5	2.5	2.5	3.4	3393	chr2R	19776570	intergenic	not near genes	chr2R	19778266	intergenic	not near genes	chr2R	19779963	intergenic	not near genes	chr2R_12_19775001	chr2R_19775001	1182-4H
867	chr2R	19914833	19914877	chr2R	19922270	19922309	mdg1	10	7436	1.5	2.0	1.8	3.6	7476	chr2R	19914833	intergenic	not near genes	chr2R	19918571	intergenic	not near genes	chr2R	19922309	intergenic	not near genes	chr2R_10_19915001	chr2R_19915001	1182-4H
869	chr2R	19957425	19957454	chr2R	19962631	19962681	copia	11	5222	5.0	3.0	4.0	2.2	5256	chr2R	19957425	intergenic	CG44623 +	chr2R	19960053	intergenic	not near genes	chr2R	19962681	intergenic	not near genes	chr2R_11_19960001	chr2R_19960001	1182-4H
871	chr2R	20069234	20069249	chr2R	20071897	20071906	opus	4	2661	0.5	6.0	3.2	1.0	2672	chr2R	20069234	intergenic	not near genes	chr2R	20070570	intergenic	not near genes	chr2R	20071906	intergenic	not near genes	chr2R_4_20070001	chr2R_20070001	1182-4H
883	chr2R	20739424	20739436	chr2R	20744217	20744224	F-element	4	4792	12.0	10.0	11.0	0.3	4800	chr2R	20739424	intron	dpr +	chr2R	20741824	intron	dpr +	chr2R	20744224	intron	dpr +	chr2R_4_20740001	chr2R_20740001	1182-4H
884	chr2R	20739437	20739472	chr2R	20744211	20744265	F-element	10	4788	6.5	9.0	7.8	1.1	4828	chr2R	20739437	intron	dpr +	chr2R	20741851	intron	dpr +	chr2R	20744265	intron	dpr +	chr2R_10_20740001	chr2R_20740001	1182-4H
886	chr2R	20783287	20783324	chr2R	20788084	20788121	F-element	15	4797	4.5	2.5	3.5	3.3	4834	chr2R	20783287	intergenic	not near genes	chr2R	20785704	intergenic	not near genes	chr2R	20788121	intergenic	CG43666 -	chr2R_15_20785001	chr2R_20785001	1182-4H
893	chr2R	21151096	21151145	chr2R	21153754	21153803	opus	7	2658	2.0	4.0	3.0	1.8	2707	chr2R	21151096	intron	CG30389 -	chr2R	21152450	intron	CG30389 -	chr2R	21153803	intron	CG30389 -	chr2R_7_21150001	chr2R_21150001	1182-4H
903	chr2R	21738278	21738310	chr2R	21747447	21747458	roo	5	9168	2.5	5.5	4.0	1.0	9180	chr2R	21738278	intergenic	not near genes	chr2R	21742868	intergenic	not near genes	chr2R	21747458	intergenic	not near genes	chr2R_5_21740001	chr2R_21740001	1182-4H
904	chr2R	21753062	21753116	chr2R	21753572	21753626	roo	12	510	1.0	3.5	2.2	3.8	564	chr2R	21753062	intergenic	not near genes	chr2R	21753344	intergenic	not near genes	chr2R	21753626	intergenic	not near genes	chr2R_12_21750001	chr2R_21750001	1182-4H
916	chr2R	22349674	22349714	chr2R	22351483	22351523	jockey	9	1808	4.0	4.5	4.2	1.7	1849	chr2R	22349674	intron	Liprin-gamma -	chr2R	22350598	intron	Liprin-gamma -	chr2R	22351523	intron	Liprin-gamma -	chr2R_9_22350001	chr2R_22350001	1182-4H
921	chr2R	22525729	22525766	chr2R	22529309	22529346	jockey	11	3577	5.0	4.0	4.5	2.0	3617	chr2R	22525729	intron	px -	chr2R	22527538	intron	px -	chr2R	22529346	intron	px -	chr2R_11_22525001	chr2R_22525001	1182-4H
926	chr2R	22774945	22774995	chr2R	22775388	22775439	jockey	16	442	3.0	1.5	2.2	5.0	494	chr2R	22774945	intron	CG42260 -	chr2R	22775192	intron	CG42260 -	chr2R	22775439	intron	CG42260 -	chr2R_16_22775001	chr2R_22775001	1182-4H
928	chr2R	22843028	22843046	chr2R	22845019	22845037	flea	6	1991	1.5	4.5	3.0	1.5	2009	chr2R	22843028	intergenic	CG9826 +	chr2R	22844032	intergenic	not near genes	chr2R	22845037	intergenic	not near genes	chr2R_6_22840001	chr2R_22840001	1182-4H
946	chr2R	23529558	23529607	chr2R	23537152	23537208	412	23	7595	4.0	5.5	4.8	4.0	7650	chr2R	23529558	intron	bw -	chr2R	23533383	intron	bw -	chr2R	23537208	exon	bw -	chr2R_23_23530001	chr2R_23530001	1182-4H
953	chr2R	23914286	23914324	chr2R	23921935	23921961	412	18	7647	9.0	12.0	10.5	1.6	7675	chr2R	23914286	exon	kcc +	chr2R	23918124	intron	kcc +	chr2R	23921961	intron	kcc +	chr2R_18_23915001	chr2R_23915001	1182-4H
956	chr2R	24147051	24147097	chr2R	24154653	24154700	412	13	7600	3.0	9.0	6.0	1.9	7649	chr2R	24147051	intron	Dat +	chr2R	24150876	intron	Dat +	chr2R	24154700	intron	Dat +	chr2R_13_24150001	chr2R_24150001	1182-4H
957	chr2R	24177214	24177253	chr2R	24184724	24184763	412	5	7509	6.0	2.5	4.2	1.0	7549	chr2R	24177214	3` UTR	Nop60B +	chr2R	24180988	intron	Nop60B +	chr2R	24184763	3` UTR	Nop60B +	chr2R_5_24180001	chr2R_24180001	1182-4H
963	chr2R	24353420	24353442	chr2R	24361807	24361828	roo	10	8386	1.5	4.5	3.0	2.5	8408	chr2R	24353420	intron,intron	bs +,CR44811 -	chr2R	24357624	intron,intron	bs +,CR44811 -	chr2R	24361828	intron,intron	bs +,CR44811 -	chr2R_10_24355001	chr2R_24355001	1182-4H
970	chr2R	24647574	24647616	chr2R	24655156	24655198	412	11	7580	2.0	4.0	3.0	2.8	7624	chr2R	24647574	intergenic	not near genes	chr2R	24651386	intergenic	not near genes	chr2R	24655198	intergenic	not near genes	chr2R_11_24650001	chr2R_24650001	1182-4H
972	chr2R	24763590	24763643	chr2R	24765588	24765644	G2	25	1997	6.5	8.0	7.2	3.0	2054	chr2R	24763590	exon	CG3894 +	chr2R	24764617	intron	CG3894 +	chr2R	24765644	exon	CG3894 +	chr2R_25_24760001	chr2R_24760001	1182-4H
982	chr2R	25141633	25141680	chr2R	25159348	25159395	roo	6	17712	2.5	1.5	2.0	2.0	17762	chr2R	25141633	intergenic	not near genes	chr2R	25150514	intergenic	not near genes	chr2R	25159395	intergenic	not near genes	chr2R_6_25150001	chr2R_25150001	1182-4H
986	chr3L	110193	110239	chr3L	119385	119431	roo	18	9190	3.0	3.0	3.0	4.5	9238	chr3L	110193	intergenic	not near genes	chr3L	114812	intergenic	not near genes	chr3L	119431	intergenic	not near genes	chr3L_18_110001	chr3L_110001	1182-4H
995	chr3L	402663	402711	chr3L	409741	409783	297	34	7078	15.5	13.5	14.5	2.2	7120	chr3L	402663	intergenic	not near genes	chr3L	406223	intergenic	not near genes	chr3L	409783	intergenic	not near genes	chr3L_34_405001	chr3L_405001	1182-4H
1009	chr3L	789895	789909	chr3L	790405	790419	roo	5	510	13.5	7.5	10.5	0.4	524	chr3L	789895	intergenic	not near genes	chr3L	790157	intergenic	not near genes	chr3L	790419	intergenic	not near genes	chr3L_5_790001	chr3L_790001	1182-4H
1010	chr3L	789913	789944	chr3L	790422	790446	roo	13	509	6.5	13.0	9.8	1.2	533	chr3L	789913	intergenic	not near genes	chr3L	790180	intergenic	not near genes	chr3L	790446	intergenic	not near genes	chr3L_13_790001	chr3L_790001	1182-4H
1011	chr3L	857973	857981	chr3L	866479	866487	Tirant	6	8505	21.5	9.0	15.2	0.4	8514	chr3L	857973	intergenic	not near genes	chr3L	862230	intergenic	not near genes	chr3L	866487	intergenic	CG12502 +	chr3L_6_860001	chr3L_860001	1182-4H
1012	chr3L	857983	858031	chr3L	866478	866506	Tirant	33	8493	7.0	9.0	8.0	3.7	8523	chr3L	857983	intergenic	not near genes	chr3L	862244	intergenic	not near genes	chr3L	866506	5` UTR	CG12502 +	chr3L_33_860001	chr3L_860001	1182-4H
1013	chr3L	925151	925210	chr3L	932602	932661	mdg1	20	7451	7.0	5.5	6.2	2.8	7510	chr3L	925151	intron	Glut1 +	chr3L	928906	intron	Glut1 +	chr3L	932661	intron	Glut1 +	chr3L_20_925001	chr3L_925001	1182-4H
1016	chr3L	939751	939793	chr3L	940897	940939	jockey	32	1145	11.0	9.5	10.2	2.9	1188	chr3L	939751	intron	Glut1 +	chr3L	940345	intron	Glut1 +	chr3L	940939	intron	Glut1 +	chr3L_32_940001	chr3L_940001	1182-4H
1021	chr3L	1047355	1047385	chr3L	1055184	1055223	412	10	7831	2.0	4.5	3.2	2.4	7868	chr3L	1047355	intron	bab1 -	chr3L	1051289	intron	bab1 -	chr3L	1055223	intron	bab1 -	chr3L_10_1050001	chr3L_1050001	1182-4H
1025	chr3L	1154128	1154156	chr3L	1163303	1163331	roo	7	9174	2.5	7.5	5.0	1.2	9203	chr3L	1154128	intron	bab2 -	chr3L	1158730	intron	bab2 -	chr3L	1163331	intron	bab2 -	chr3L_7_1155001	chr3L_1155001	1182-4H
1026	chr3L	1219569	1219618	chr3L	1227327	1227356	412	28	7753	5.0	8.0	6.5	3.7	7787	chr3L	1219569	intron	mwh +	chr3L	1223462	intron	mwh +	chr3L	1227356	intron	mwh +	chr3L_28_1220001	chr3L_1220001	1182-4H
1035	chr3L	1485716	1485741	chr3L	1486908	1486917	1360	16	1189	9.0	9.5	9.2	1.6	1201	chr3L	1485716	intron	stet -	chr3L	1486316	intron	stet -	chr3L	1486917	intron	stet -	chr3L_16_1485001	chr3L_1485001	1182-4H
1037	chr3L	1505975	1506028	chr3L	1513597	1513650	17.6	26	7621	8.0	4.0	6.0	3.7	7675	chr3L	1505975	intron,intron	Psa +,cue -	chr3L	1509812	intron,intron	Psa +,cue -	chr3L	1513650	intron,intron	Psa +,cue -	chr3L_26_1505001	chr3L_1505001	1182-4H
1045	chr3L	1740834	1740859	chr3L	1741102	1741129	pogo	11	268	9.0	8.0	8.5	1.2	295	chr3L	1740834	intron	Gk +	chr3L	1740982	intron	Gk +	chr3L	1741129	intron	Gk +	chr3L_11_1740001	chr3L_1740001	1182-4H
1046	chr3L	1740860	1740877	chr3L	1741098	1741140	pogo	5	260	7.0	6.5	6.8	0.6	280	chr3L	1740860	intron	Gk +	chr3L	1741000	intron	Gk +	chr3L	1741140	intron	Gk +	chr3L_5_1740001	chr3L_1740001	1182-4H
1054	chr3L	2108223	2108277	chr3L	2113452	2113506	copia	13	5227	5.0	7.5	6.2	1.8	5283	chr3L	2108223	intron	sls -	chr3L	2110864	intron	sls -	chr3L	2113506	intron	sls -	chr3L_13_2110001	chr3L_2110001	1182-4H
1066	chr3L	2447481	2447534	chr3L	2456662	2456699	roo	20	9176	5.0	4.5	4.8	3.4	9218	chr3L	2447481	intron	CG45186 +	chr3L	2452090	intron	CG45186 +	chr3L	2456699	intron	CG45186 +	chr3L_20_2450001	chr3L_2450001	1182-4H
1079	chr3L	2751432	2751457	chr3L	2755752	2755777	F-element	8	4319	8.0	8.5	8.2	0.9	4345	chr3L	2751432	intron	Mrtf -	chr3L	2753604	intron	Mrtf -	chr3L	2755777	intron	Mrtf -	chr3L_8_2750001	chr3L_2750001	1182-4H
1085	chr3L	2927820	2927857	chr3L	2936120	2936159	Tirant	5	8297	4.0	5.0	4.5	0.9	8339	chr3L	2927820	intron	Shab +	chr3L	2931990	intron	Shab +	chr3L	2936159	intron	Shab +	chr3L_5_2930001	chr3L_2930001	1182-4H
1088	chr3L	3061270	3061307	chr3L	3069873	3069885	Tirant	7	8591	4.5	4.5	4.5	1.3	8615	chr3L	3061270	intron	CG32486 -	chr3L	3065578	intron	CG32486 -	chr3L	3069885	intron	CG32486 -	chr3L_7_3065001	chr3L_3065001	1182-4H
1092	chr3L	3281451	3281462	chr3L	3281958	3281978	Doc	11	516	6.0	10.5	8.2	1.2	527	chr3L	3281451	intron	CG12017 +	chr3L	3281714	intron	CG12017 +	chr3L	3281978	intron	CG12017 +	chr3L_11_3280001	chr3L_3280001	1182-4H
1096	chr3L	3475056	3475099	chr3L	3475525	3475563	jockey	7	464	5.0	5.5	5.2	1.1	507	chr3L	3475056	intron	CG42324 +	chr3L	3475310	intron	CG42324 +	chr3L	3475563	intron	CG42324 +	chr3L_7_3475001	chr3L_3475001	1182-4H
1103	chr3L	3601284	3601330	chr3L	3606620	3606666	copia	11	5334	3.0	4.0	3.5	2.4	5382	chr3L	3601284	intron	Eip63E +	chr3L	3603975	intron	Eip63E +	chr3L	3606666	intron	Eip63E +	chr3L_11_3600001	chr3L_3600001	1182-4H
1107	chr3L	3833723	3833739	chr3L	3833984	3834005	pogo	6	265	8.5	2.0	5.2	1.0	282	chr3L	3833723	intron	enc +	chr3L	3833864	intron	enc +	chr3L	3834005	intron	enc +	chr3L_6_3830001	chr3L_3830001	1182-4H
1120	chr3L	4328723	4328757	chr3L	4336246	4336280	412	5	7523	1.5	3.0	2.2	1.6	7557	chr3L	4328723	intron	Cip4 -	chr3L	4332502	intron	Cip4 -	chr3L	4336280	exon	Cip4 -	chr3L_5_4330001	chr3L_4330001	1182-4H
1137	chr3L	4901135	4901152	chr3L	4907320	4907367	diver	7	6208	4.5	3.0	3.8	1.5	6232	chr3L	4901135	intergenic	CG13704 +	chr3L	4904251	intergenic	not near genes	chr3L	4907367	intergenic	not near genes	chr3L_7_4900001	chr3L_4900001	1182-4H
1138	chr3L	5045439	5045466	chr3L	5050245	5050272	Doc	5	4806	7.5	3.0	5.2	0.8	4833	chr3L	5045439	intron	Con -	chr3L	5047856	intron	Con -	chr3L	5050272	intron	Con -	chr3L_5_5045001	chr3L_5045001	1182-4H
1149	chr3L	5537697	5537752	chr3L	5538064	5538119	jockey	6	367	2.5	3.5	3.0	1.5	422	chr3L	5537697	intergenic	not near genes	chr3L	5537908	intergenic	not near genes	chr3L	5538119	intergenic	CG10625 -	chr3L_6_5535001	chr3L_5535001	1182-4H
1151	chr3L	5910007	5910060	chr3L	5910273	5910325	pogo	10	266	4.0	4.0	4.0	2.0	318	chr3L	5910007	intron	CG13288 +	chr3L	5910166	intron	CG13288 +	chr3L	5910325	intron	CG13288 +	chr3L_10_5910001	chr3L_5910001	1182-4H
1152	chr3L	5926303	5926339	chr3L	5926508	5926554	BS	13	211	3.0	6.5	4.8	2.2	251	chr3L	5926303	intron	Vap-33B +	chr3L	5926428	intron	Vap-33B +	chr3L	5926554	intron	Vap-33B +	chr3L_13_5925001	chr3L_5925001	1182-4H
1155	chr3L	6001661	6001696	chr3L	6004386	6004421	jockey	8	2723	4.5	0.5	2.5	2.3	2760	chr3L	6001661	intron	PVRAP +	chr3L	6003041	intron	PVRAP +	chr3L	6004421	intron	PVRAP +	chr3L_8_6000001	chr3L_6000001	1182-4H
1156	chr3L	6040347	6040386	chr3L	6042728	6042766	Doc	5	2381	1.0	3.5	2.2	1.6	2419	chr3L	6040347	intergenic	Jon65Aiv +	chr3L	6041556	intergenic	not near genes	chr3L	6042766	intergenic	not near genes	chr3L_5_6040001	chr3L_6040001	1182-4H
1161	chr3L	6220888	6220944	chr3L	6230065	6230121	roo	7	9175	4.5	4.0	4.2	1.3	9233	chr3L	6220888	5` UTR	pncr008:3L +	chr3L	6225504	intergenic	not near genes	chr3L	6230121	intergenic	not near genes	chr3L_7_6225001	chr3L_6225001	1182-4H
1163	chr3L	6334987	6335036	chr3L	6335483	6335532	297	10	496	2.5	3.5	3.0	2.5	545	chr3L	6334987	intron	CG13300 -	chr3L	6335260	intron	CG13300 -	chr3L	6335532	intron	CG13300 -	chr3L_10_6335001	chr3L_6335001	1182-4H
1166	chr3L	6620588	6620602	chr3L	6621053	6621067	Rt1c	6	462	3.0	11.5	7.2	0.7	479	chr3L	6620588	intergenic	not near genes	chr3L	6620828	intergenic	not near genes	chr3L	6621067	intergenic	not near genes	chr3L_6_6620001	chr3L_6620001	1182-4H
1168	chr3L	6781111	6781136	chr3L	6783149	6783174	Doc	4	2038	5.0	2.0	3.5	0.9	2063	chr3L	6781111	intergenic	not near genes	chr3L	6782142	intergenic	not near genes	chr3L	6783174	intergenic	not near genes	chr3L_4_6780001	chr3L_6780001	1182-4H
1169	chr3L	6855902	6855930	chr3L	6860710	6860739	Doc	6	4809	2.5	2.5	2.5	1.7	4837	chr3L	6855902	intergenic	not near genes	chr3L	6858320	intergenic	not near genes	chr3L	6860739	intergenic	not near genes	chr3L_6_6855001	chr3L_6855001	1182-4H
1171	chr3L	6887506	6887531	chr3L	6895023	6895048	roo	9	7515	1.0	3.5	2.2	2.8	7542	chr3L	6887506	intergenic	not near genes	chr3L	6891277	intergenic	not near genes	chr3L	6895048	intergenic	not near genes	chr3L_9_6890001	chr3L_6890001	1182-4H
1190	chr3L	7377292	7377341	chr3L	7380422	7380471	297	9	3129	5.0	8.5	6.8	1.2	3179	chr3L	7377292	intron	SMSr -	chr3L	7378882	intron	SMSr -	chr3L	7380471	intron	SMSr -	chr3L_9_7375001	chr3L_7375001	1182-4H
1194	chr3L	7498708	7498738	chr3L	7503539	7503569	F-element	9	4831	3.5	1.0	2.2	2.8	4861	chr3L	7498708	5` UTR	CG8539 -	chr3L	7501138	intergenic	not near genes	chr3L	7503569	intergenic	not near genes	chr3L_9_7500001	chr3L_7500001	1182-4H
1200	chr3L	7793693	7793738	chr3L	7800770	7800815	297	11	7077	2.0	3.0	2.5	3.1	7122	chr3L	7793693	intron	CG32369 -	chr3L	7797254	intron	CG32369 -	chr3L	7800815	intron	CG32369 -	chr3L_11_7795001	chr3L_7795001	1182-4H
1202	chr3L	7886497	7886546	chr3L	7889040	7889089	Stalker4	6	2543	2.5	1.5	2.0	2.0	2592	chr3L	7886497	intron	CG32365 +	chr3L	7887793	intron	CG32365 +	chr3L	7889089	intron	CG32365 +	chr3L_6_7885001	chr3L_7885001	1182-4H
1203	chr3L	7916820	7916856	chr3L	7926016	7926052	roo	8	9193	3.5	3.0	3.2	1.9	9232	chr3L	7916820	3` UTR	syd -	chr3L	7921436	intron	syd -	chr3L	7926052	3` UTR	syd -	chr3L_8_7920001	chr3L_7920001	1182-4H
1204	chr3L	7985342	7985368	chr3L	7987695	7987721	NOF	6	2351	4.0	1.0	2.5	1.7	2379	chr3L	7985342	intron	nmo +	chr3L	7986532	intron	nmo +	chr3L	7987721	intron	nmo +	chr3L_6_7985001	chr3L_7985001	1182-4H
1211	chr3L	8233583	8233588	chr3L	8238870	8238875	Rt1a	4	5286	4.5	11.5	8.0	0.4	5292	chr3L	8233583	intron	CG7213 -	chr3L	8236229	intron	CG7213 -	chr3L	8238875	intron,intron	CG7213 -,Dscam4 +	chr3L_4_8235001	chr3L_8235001	1182-4H
1220	chr3L	8481792	8481804	chr3L	8490967	8490988	roo	7	9178	5.0	6.5	5.8	1.0	9196	chr3L	8481792	intron	CG43163 -	chr3L	8486390	intron	CG43163 -	chr3L	8490988	intron	CG43163 -	chr3L_7_8485001	chr3L_8485001	1182-4H
1223	chr3L	8791264	8791301	chr3L	8796707	8796745	I-element	5	5444	6.5	0.0	3.2	1.2	5481	chr3L	8791264	exon	Fhos +	chr3L	8794004	intron	Fhos +	chr3L	8796745	intron	Fhos +	chr3L_5_8790001	chr3L_8790001	1182-4H
1231	chr3L	9076909	9076944	chr3L	9084494	9084529	412	13	7582	8.5	4.5	6.5	1.7	7620	chr3L	9076909	exon	Tequila +	chr3L	9080719	intron	Tequila +	chr3L	9084529	exon	Tequila +	chr3L_13_9080001	chr3L_9080001	1182-4H
1233	chr3L	9130537	9130578	chr3L	9134318	9134364	412	9	3784	5.0	3.5	4.2	1.7	3827	chr3L	9130537	intergenic	bol -	chr3L	9132450	intergenic	not near genes	chr3L	9134364	intergenic	Dhpr +	chr3L_9_9130001	chr3L_9130001	1182-4H
1234	chr3L	9164673	9164706	chr3L	9166165	9166198	hobo	9	1491	4.5	0.0	2.2	2.8	1525	chr3L	9164673	intron	Rdl -	chr3L	9165436	intron	Rdl -	chr3L	9166198	intron	Rdl -	chr3L_9_9165001	chr3L_9165001	1182-4H
1235	chr3L	9219227	9219269	chr3L	9219924	9219966	jockey	12	695	7.0	5.0	6.0	1.7	739	chr3L	9219227	intergenic	not near genes	chr3L	9219596	intergenic	not near genes	chr3L	9219966	intergenic	not near genes	chr3L_12_9215001	chr3L_9215001	1182-4H
1236	chr3L	9270601	9270641	chr3L	9278381	9278421	roo	6	7780	3.0	7.5	5.2	1.0	7820	chr3L	9270601	intron	GluRIB +	chr3L	9274511	intron	GluRIB +	chr3L	9278421	exon	GluRIB +	chr3L_6_9270001	chr3L_9270001	1182-4H
1241	chr3L	9443494	9443533	chr3L	9445310	9445349	S-element	8	1816	2.0	3.0	2.5	2.3	1855	chr3L	9443494	intron	CG33926 +	chr3L	9444422	intron	CG33926 +	chr3L	9445349	intron	CG33926 +	chr3L_8_9440001	chr3L_9440001	1182-4H
1242	chr3L	9501679	9501709	chr3L	9502190	9502220	roo	6	511	6.0	0.5	3.2	1.4	541	chr3L	9501679	intron	path -	chr3L	9501950	intron	path -	chr3L	9502220	intron	path -	chr3L_6_9500001	chr3L_9500001	1182-4H
1247	chr3L	9526467	9526504	chr3L	9528172	9528209	Doc	5	1701	1.0	2.5	1.8	1.8	1742	chr3L	9526467	intergenic	not near genes	chr3L	9527338	intergenic	not near genes	chr3L	9528209	intergenic	not near genes	chr3L_5_9525001	chr3L_9525001	1182-4H
1248	chr3L	9533727	9533760	chr3L	9541312	9541345	412	12	7584	9.0	13.0	11.0	1.0	7618	chr3L	9533727	intergenic	not near genes	chr3L	9537536	intergenic	not near genes	chr3L	9541345	intergenic	not near genes	chr3L_12_9535001	chr3L_9535001	1182-4H
1249	chr3L	9571887	9571930	chr3L	9572260	9572303	jockey	7	373	3.0	3.5	3.2	1.7	416	chr3L	9571887	intron	CG42673 +	chr3L	9572095	intron	CG42673 +	chr3L	9572303	intron	CG42673 +	chr3L_7_9570001	chr3L_9570001	1182-4H
1250	chr3L	9575887	9575938	chr3L	9580990	9581041	jockey	12	5099	3.5	2.5	3.0	3.0	5154	chr3L	9575887	intron	CG42673 +	chr3L	9578464	intron	CG42673 +	chr3L	9581041	intron	CG42673 +	chr3L_12_9575001	chr3L_9575001	1182-4H
1256	chr3L	10060096	10060114	chr3L	10067693	10067717	17.6	6	7602	5.5	3.5	4.5	1.1	7621	chr3L	10060096	intron	dpr6 +	chr3L	10063906	intron	dpr6 +	chr3L	10067717	intron	dpr6 +	chr3L_6_10060001	chr3L_10060001	1182-4H
1276	chr3L	10414927	10414972	chr3L	10417324	10417368	Doc	7	2397	2.5	4.0	3.2	1.7	2441	chr3L	10414927	intergenic	CG12362 +	chr3L	10416148	intergenic	not near genes	chr3L	10417368	intergenic	not near genes	chr3L_7_10415001	chr3L_10415001	1182-4H
1290	chr3L	11105273	11105296	chr3L	11107009	11107032	X-element	6	1735	3.5	6.0	4.8	1.0	1759	chr3L	11105273	intergenic	not near genes	chr3L	11106152	intergenic	not near genes	chr3L	11107032	exon	CG32073 -	chr3L_6_11105001	chr3L_11105001	1182-4H
1292	chr3L	11264442	11264494	chr3L	11271418	11271465	17.6	16	6973	5.0	3.5	4.2	3.1	7023	chr3L	11264442	intergenic	not near genes	chr3L	11267954	intergenic	not near genes	chr3L	11271465	intergenic	not near genes	chr3L_16_11265001	chr3L_11265001	1182-4H
1294	chr3L	11329492	11329534	chr3L	11332909	11332951	jockey	8	3415	7.5	4.5	6.0	1.1	3459	chr3L	11329492	intergenic	not near genes	chr3L	11331222	intergenic	not near genes	chr3L	11332951	intergenic	not near genes	chr3L_8_11330001	chr3L_11330001	1182-4H
1310	chr3L	11864535	11864579	chr3L	11865855	11865899	pogo	22	1319	4.0	7.0	5.5	3.4	1364	chr3L	11864535	intron	CG44837 -	chr3L	11865217	intron	CG44837 -	chr3L	11865899	intron	CG44837 -	chr3L_22_11865001	chr3L_11865001	1182-4H
1336	chr3L	12874898	12874952	chr3L	12877215	12877269	jockey	5	2317	2.5	2.0	2.2	1.6	2371	chr3L	12874898	intergenic	not near genes	chr3L	12876084	intergenic	not near genes	chr3L	12877269	intergenic	not near genes	chr3L_5_12875001	chr3L_12875001	1182-4H
1356	chr3L	13525144	13525177	chr3L	13532960	13532998	roo	10	7820	5.0	2.5	3.8	2.1	7854	chr3L	13525144	intergenic	not near genes	chr3L	13529071	intergenic	not near genes	chr3L	13532998	intergenic	not near genes	chr3L_10_13525001	chr3L_13525001	1182-4H
1360	chr3L	13804525	13804572	chr3L	13822836	13822873	roo	6	18308	2.0	3.0	2.5	1.7	18348	chr3L	13804525	intergenic	not near genes	chr3L	13813699	intergenic	not near genes	chr3L	13822873	intergenic	not near genes	chr3L_6_13810001	chr3L_13810001	1182-4H
1369	chr3L	14245546	14245590	chr3L	14245665	14245709	1360	11	118	6.5	4.0	5.2	1.8	163	chr3L	14245546	3` UTR	CR44561 -	chr3L	14245628	3` UTR	CR44561 -	chr3L	14245709	intergenic	CR44561 -,CR44560 +	chr3L_11_14245001	chr3L_14245001	1182-4H
1372	chr3L	14295955	14296004	chr3L	14296466	14296515	roo	14	508	8.0	5.0	6.5	1.9	560	chr3L	14295955	intron	fz +	chr3L	14296235	intron	fz +	chr3L	14296515	intron	fz +	chr3L_14_14295001	chr3L_14295001	1182-4H
1373	chr3L	14312020	14312057	chr3L	14316834	14316855	X-element	9	4825	4.0	4.5	4.2	1.7	4835	chr3L	14312020	exon	fz +	chr3L	14314438	intron	fz +	chr3L	14316855	intron	fz +	chr3L_9_14310001	chr3L_14310001	1182-4H
1377	chr3L	14468423	14468475	chr3L	14473654	14473706	copia	8	5229	4.0	1.5	2.8	2.1	5283	chr3L	14468423	intron	bbg -	chr3L	14471064	intron	bbg -	chr3L	14473706	intron	bbg -	chr3L_8_14470001	chr3L_14470001	1182-4H
1385	chr3L	14721161	14721208	chr3L	14723029	14723068	Rt1c	8	1865	3.5	4.0	3.8	1.7	1907	chr3L	14721161	intron	ome +	chr3L	14722114	intron	ome +	chr3L	14723068	intron	ome +	chr3L_8_14720001	chr3L_14720001	1182-4H
1386	chr3L	14725581	14725607	chr3L	14728600	14728626	Doc	5	3018	1.0	5.0	3.0	1.2	3045	chr3L	14725581	intron	ome +	chr3L	14727104	intron	ome +	chr3L	14728626	intron	ome +	chr3L_5_14725001	chr3L_14725001	1182-4H
1398	chr3L	15423747	15423782	chr3L	15426616	15426651	opus	7	2869	1.5	1.5	1.5	2.8	2904	chr3L	15423747	intergenic	not near genes	chr3L	15425199	intergenic	not near genes	chr3L	15426651	intergenic	not near genes	chr3L_7_15425001	chr3L_15425001	1182-4H
1411	chr3L	15899212	15899232	chr3L	15899798	15899817	jockey	6	590	6.5	6.5	6.5	0.8	605	chr3L	15899212	intergenic	pHCl -	chr3L	15899514	intergenic	pHCl -	chr3L	15899817	intergenic	sff -	chr3L_6_15895001	chr3L_15895001	1182-4H
1412	chr3L	15899235	15899261	chr3L	15899796	15899832	jockey	8	578	2.5	5.5	4.0	1.6	597	chr3L	15899235	intergenic	pHCl -	chr3L	15899534	intergenic	not near genes	chr3L	15899832	intergenic	sff -	chr3L_8_15895001	chr3L_15895001	1182-4H
1413	chr3L	15929176	15929225	chr3L	15938348	15938397	roo	8	9172	1.5	1.0	1.2	3.6	9221	chr3L	15929176	intron	Pka-C3 -	chr3L	15933786	intron	Pka-C3 -	chr3L	15938397	intron	Pka-C3 -	chr3L_8_15930001	chr3L_15930001	1182-4H
1416	chr3L	16184085	16184110	chr3L	16188944	16188979	X-element	5	4867	2.0	7.0	4.5	0.9	4894	chr3L	16184085	intergenic	not near genes	chr3L	16186532	intergenic	not near genes	chr3L	16188979	intergenic	not near genes	chr3L_5_16185001	chr3L_16185001	1182-4H
1423	chr3L	16493952	16494005	chr3L	16494494	16494536	jockey	12	540	5.0	3.5	4.2	2.3	584	chr3L	16493952	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L	16494244	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L	16494536	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L_12_16490001	chr3L_16490001	1182-4H
1428	chr3L	16616498	16616535	chr3L	16621851	16621887	297	7	5353	2.0	3.5	2.8	1.8	5389	chr3L	16616498	3` UTR	Abl -	chr3L	16619192	3` UTR	Abl -	chr3L	16621887	3` UTR	Abl -	chr3L_7_16615001	chr3L_16615001	1182-4H
1438	chr3L	16945705	16945748	chr3L	16954883	16954926	roo	11	9173	7.0	3.5	5.2	1.8	9221	chr3L	16945705	exon	Obp73a +	chr3L	16950316	intergenic	not near genes	chr3L	16954926	5` UTR	Nc73EF +	chr3L_11_16950001	chr3L_16950001	1182-4H
1441	chr3L	17084980	17085021	chr3L	17094154	17094186	roo	13	9173	5.5	3.5	4.5	2.4	9206	chr3L	17084980	intron	Rbp6 -	chr3L	17089583	intron	Rbp6 -	chr3L	17094186	intron	Rbp6 -	chr3L_13_17085001	chr3L_17085001	1182-4H
1453	chr3L	17516965	17517007	chr3L	17524543	17524590	412	7	7581	4.0	5.5	4.8	1.2	7625	chr3L	17516965	intron	CG7564 +	chr3L	17520778	intron	CG7564 +	chr3L	17524590	3` UTR	CG7564 +	chr3L_7_17520001	chr3L_17520001	1182-4H
1461	chr3L	17799797	17799832	chr3L	17801609	17801644	S-element	6	1812	2.0	3.5	2.8	1.6	1847	chr3L	17799797	intron	NUCB1 -	chr3L	17800720	intron	NUCB1 -	chr3L	17801644	intron	NUCB1 -	chr3L_6_17800001	chr3L_17800001	1182-4H
1464	chr3L	17918360	17918401	chr3L	17921188	17921229	opus	8	2828	2.0	1.5	1.8	2.9	2869	chr3L	17918360	intergenic	not near genes	chr3L	17919794	intergenic	not near genes	chr3L	17921229	intergenic	not near genes	chr3L_8_17915001	chr3L_17915001	1182-4H
1467	chr3L	18047689	18047731	chr3L	18056771	18056813	roo	9	9081	2.5	3.5	3.0	2.2	9124	chr3L	18047689	intron	Eip75B -	chr3L	18052251	intron	Eip75B -	chr3L	18056813	intron	Eip75B -	chr3L_9_18050001	chr3L_18050001	1182-4H
1480	chr3L	18506124	18506156	chr3L	18509612	18509644	F-element	4	3488	2.0	1.0	1.5	1.6	3520	chr3L	18506124	intergenic	not near genes	chr3L	18507884	intergenic	not near genes	chr3L	18509644	intergenic	not near genes	chr3L_4_18505001	chr3L_18505001	1182-4H
1481	chr3L	18528606	18528655	chr3L	18537792	18537841	roo	9	9186	1.5	4.5	3.0	2.2	9235	chr3L	18528606	intergenic	not near genes	chr3L	18533224	intergenic	not near genes	chr3L	18537841	intergenic	not near genes	chr3L_9_18530001	chr3L_18530001	1182-4H
1482	chr3L	18593928	18593981	chr3L	18595932	18595974	Doc	13	2002	4.0	2.5	3.2	3.1	2046	chr3L	18593928	intergenic	term -	chr3L	18594951	intergenic	not near genes	chr3L	18595974	intergenic	CR45389 +	chr3L_13_18590001	chr3L_18590001	1182-4H
1484	chr3L	18710739	18710788	chr3L	18718716	18718765	Stalker2	7	7977	1.5	2.5	2.0	2.3	8026	chr3L	18710739	intergenic	not near genes	chr3L	18714752	intergenic	not near genes	chr3L	18718765	intergenic	not near genes	chr3L_7_18710001	chr3L_18710001	1182-4H
1485	chr3L	18772386	18772439	chr3L	18781092	18781124	roo	11	8704	2.5	5.5	4.0	2.2	8738	chr3L	18772386	intron	ftz-f1 -	chr3L	18776755	intron	ftz-f1 -	chr3L	18781124	intron	ftz-f1 -	chr3L_11_18775001	chr3L_18775001	1182-4H
1491	chr3L	19008822	19008858	chr3L	19009184	19009221	jockey	4	362	3.5	4.0	3.8	0.8	399	chr3L	19008822	intron	nkd -	chr3L	19009022	intron	nkd -	chr3L	19009221	intron	nkd -	chr3L_4_19005001	chr3L_19005001	1182-4H
1495	chr3L	19115615	19115671	chr3L	19115819	19115876	BS	10	201	5.0	2.5	3.8	2.1	261	chr3L	19115615	intron	CG14082 -	chr3L	19115746	intron	CG14082 -	chr3L	19115876	intron	CG14082 -	chr3L_10_19115001	chr3L_19115001	1182-4H
1496	chr3L	19117020	19117076	chr3L	19124492	19124548	mdg1	15	7471	3.5	5.0	4.2	2.9	7528	chr3L	19117020	intron	CG14082 -	chr3L	19120784	intron	CG14082 -	chr3L	19124548	intron	CG14082 -	chr3L_15_19120001	chr3L_19120001	1182-4H
1500	chr3L	19208039	19208087	chr3L	19209438	19209481	Doc	13	1398	2.0	2.5	2.2	4.1	1442	chr3L	19208039	intron	fz2 -	chr3L	19208760	intron	fz2 -	chr3L	19209481	intron	fz2 -	chr3L_13_19205001	chr3L_19205001	1182-4H
1505	chr3L	19398926	19398932	chr3L	19403658	19403674	F-element	6	4740	2.0	5.0	3.5	1.3	4748	chr3L	19398926	intron	CG32206 -	chr3L	19401300	intron	CG32206 -	chr3L	19403674	intron	CG32206 -	chr3L_6_19400001	chr3L_19400001	1182-4H
1512	chr3L	19820285	19820312	chr3L	19827859	19827886	412	6	7574	3.5	6.0	4.8	1.0	7601	chr3L	19820285	intron	Deaf1 +	chr3L	19824086	intron	Deaf1 +	chr3L	19827886	intron	Deaf1 +	chr3L_6_19820001	chr3L_19820001	1182-4H
1513	chr3L	19848484	19848530	chr3L	19857699	19857744	roo	7	9215	4.5	2.0	3.2	1.7	9260	chr3L	19848484	intron	Papss +	chr3L	19853114	intron	Papss +	chr3L	19857744	intron	Papss +	chr3L_7_19850001	chr3L_19850001	1182-4H
1514	chr3L	19861795	19861853	chr3L	19863608	19863666	S-element	15	1813	3.5	1.0	2.2	4.7	1871	chr3L	19861795	5` UTR	CR45433 +	chr3L	19862730	intergenic	not near genes	chr3L	19863666	intergenic	not near genes	chr3L_15_19860001	chr3L_19860001	1182-4H
1520	chr3L	20113640	20113685	chr3L	20122922	20122964	roo	6	9281	2.5	3.0	2.8	1.6	9324	chr3L	20113640	intergenic	not near genes	chr3L	20118302	intergenic	not near genes	chr3L	20122964	intergenic	not near genes	chr3L_6_20115001	chr3L_20115001	1182-4H
1525	chr3L	20257316	20257357	chr3L	20258461	20258502	pogo	5	1143	1.0	3.5	2.2	1.6	1186	chr3L	20257316	intron	rdgC +	chr3L	20257909	intron	rdgC +	chr3L	20258502	intron	rdgC +	chr3L_5_20255001	chr3L_20255001	1182-4H
1530	chr3L	20476745	20476778	chr3L	20484369	20484402	springer	10	7624	1.0	3.5	2.2	3.1	7657	chr3L	20476745	3` UTR	isoQC +	chr3L	20480574	intergenic	not near genes	chr3L	20484402	3` UTR	ZnT77C -	chr3L_10_20480001	chr3L_20480001	1182-4H
1531	chr3L	20590058	20590060	chr3L	20590622	20590624	412	4	564	9.0	3.5	6.2	0.6	566	chr3L	20590058	intergenic	not near genes	chr3L	20590341	intergenic	not near genes	chr3L	20590624	intergenic	not near genes	chr3L_4_20590001	chr3L_20590001	1182-4H
1532	chr3L	20590062	20590071	chr3L	20590616	20590634	412	4	559	6.5	3.5	5.0	0.7	572	chr3L	20590062	intergenic	not near genes	chr3L	20590348	intergenic	not near genes	chr3L	20590634	intergenic	not near genes	chr3L_4_20590001	chr3L_20590001	1182-4H
1538	chr3L	21014892	21014947	chr3L	21023398	21023453	Tirant	24	8502	5.5	5.0	5.2	3.9	8561	chr3L	21014892	intron	skd -	chr3L	21019172	intron	skd -	chr3L	21023453	intron	skd -	chr3L_24_21015001	chr3L_21015001	1182-4H
1542	chr3L	21151841	21151895	chr3L	21156950	21157004	flea	13	5109	4.0	4.0	4.0	2.6	5163	chr3L	21151841	intron	Ac78C -	chr3L	21154422	intron	Ac78C -	chr3L	21157004	intron	Ac78C -	chr3L_13_21150001	chr3L_21150001	1182-4H
1546	chr3L	21243727	21243743	chr3L	21251310	21251326	412	7	7583	10.0	4.5	7.2	0.9	7599	chr3L	21243727	intron	Eip78C +	chr3L	21247526	intron	Eip78C +	chr3L	21251326	intron	Eip78C +	chr3L_7_21245001	chr3L_21245001	1182-4H
1547	chr3L	21306123	21306169	chr3L	21315307	21315353	roo	14	9184	4.0	2.5	3.2	3.3	9230	chr3L	21306123	3` UTR	CG7632 +	chr3L	21310738	intron	Pc -	chr3L	21315353	3` UTR	Pc -	chr3L_14_21310001	chr3L_21310001	1182-4H
1549	chr3L	21372700	21372743	chr3L	21379233	21379236	McClintock	4	6523	0.5	0.5	0.5	2.7	6536	chr3L	21372700	intergenic	not near genes	chr3L	21375968	intergenic	not near genes	chr3L	21379236	intergenic	not near genes	chr3L_4_21375001	chr3L_21375001	1182-4H
1550	chr3L	21498832	21498858	chr3L	21500487	21500519	1360	8	1660	5.5	7.5	6.5	1.1	1687	chr3L	21498832	intron	Glg1 -	chr3L	21499676	intron	Glg1 -	chr3L	21500519	intron	Glg1 -	chr3L_8_21495001	chr3L_21495001	1182-4H
1566	chr3L	22099662	22099691	chr3L	22105863	22105902	3S18	7	6204	4.0	3.5	3.8	1.5	6240	chr3L	22099662	intergenic	not near genes	chr3L	22102782	intergenic	not near genes	chr3L	22105902	intergenic	not near genes	chr3L_7_22100001	chr3L_22100001	1182-4H
1576	chr3L	22555756	22555797	chr3L	22563246	22563292	blood	10	7493	4.0	3.5	3.8	2.1	7536	chr3L	22555756	intergenic	not near genes	chr3L	22559524	intergenic	not near genes	chr3L	22563292	intergenic	not near genes	chr3L_10_22555001	chr3L_22555001	1182-4H
1578	chr3L	22577598	22577641	chr3L	22582411	22582454	Doc	9	4810	6.0	7.5	6.8	1.2	4856	chr3L	22577598	intergenic	not near genes	chr3L	22580026	intergenic	not near genes	chr3L	22582454	3` UTR	CG14459 -	chr3L_9_22580001	chr3L_22580001	1182-4H
1579	chr3L	22617167	22617219	chr3L	22624644	22624685	blood	15	7474	7.0	5.0	6.0	2.1	7518	chr3L	22617167	intron	CG14459 -	chr3L	22620926	intron	CG14459 -	chr3L	22624685	intron	CG14459 -	chr3L_15_22620001	chr3L_22620001	1182-4H
1582	chr3L	22761364	22761416	chr3L	22766822	22766875	Ivk	17	5459	4.5	4.0	4.2	3.3	5511	chr3L	22761364	intron	SPoCk +	chr3L	22764120	intron	SPoCk +	chr3L	22766875	intron	SPoCk +	chr3L_17_22760001	chr3L_22760001	1182-4H
1583	chr3L	22865962	22866004	chr3L	22867120	22867162	Doc	5	1158	2.0	4.0	3.0	1.2	1200	chr3L	22865962	intron	CG33170 +	chr3L	22866562	intron	CG33170 +	chr3L	22867162	intron	CG33170 +	chr3L_5_22865001	chr3L_22865001	1182-4H
1589	chr3L	22989838	22989894	chr3L	22996837	22996868	297	21	6997	3.0	1.5	2.2	6.6	7030	chr3L	22989838	intergenic	not near genes	chr3L	22993353	intergenic	not near genes	chr3L	22996868	intergenic	not near genes	chr3L_21_22990001	chr3L_22990001	1182-4H
1597	chr3L	23848827	23848843	chr3L	23849665	23849692	R1A1-element	8	846	0.0	4.5	2.2	2.5	865	chr3L	23848827	intron	CG40470 -	chr3L	23849260	intron	CG40470 -	chr3L	23849692	intron	CG40470 -	chr3L_8_23845001	chr3L_23845001	1182-4H
1599	chr3L	24168761	24168821	chr3L	24176114	24176174	ZAM	28	7350	4.0	5.5	4.8	4.8	7413	chr3L	24168761	intron	Snap25 +	chr3L	24172468	intron	Snap25 +	chr3L	24176174	intron	Snap25 +	chr3L_28_24170001	chr3L_24170001	1182-4H
1600	chr3L	24811049	24811051	chr3L	24821492	24821494	mdg1	4	10443	17.5	9.5	13.5	0.3	10445	chr3L	24811049	intergenic	not near genes	chr3L	24816272	intergenic	not near genes	chr3L	24821494	intergenic	not near genes	chr3L_4_24815001	chr3L_24815001	1182-4H
1613	chr3R	4206051	4206085	chr3R	4211651	4211677	mdg3	4	5598	6.0	1.0	3.5	0.9	5626	chr3R	4206051	intron	CG14636 -	chr3R	4208864	intron	CG14636 -	chr3R	4211677	intron	CG14636 -	chr3R_4_4205001	chr3R_4205001	1182-4H
1616	chr3R	4366740	4366788	chr3R	4375148	4375196	roo	14	8408	3.5	1.5	2.5	4.0	8456	chr3R	4366740	3` UTR	CG1090 +	chr3R	4370968	intergenic	not near genes	chr3R	4375196	5` UTR	CR44922 +	chr3R_14_4370001	chr3R_4370001	1182-4H
1617	chr3R	4408390	4408430	chr3R	4412719	4412758	Juan	9	4329	4.0	1.5	2.8	2.4	4368	chr3R	4408390	intron	CG32944 -	chr3R	4410574	intron	CG32944 -	chr3R	4412758	intron	CG32944 -	chr3R_9_4410001	chr3R_4410001	1182-4H
1619	chr3R	4609526	4609576	chr3R	4610715	4610765	1360	14	1189	6.5	3.5	5.0	2.3	1239	chr3R	4609526	intergenic	not near genes	chr3R	4610146	intergenic	not near genes	chr3R	4610765	intergenic	not near genes	chr3R_14_4610001	chr3R_4610001	1182-4H
1620	chr3R	4753225	4753264	chr3R	4757548	4757580	F-element	19	4324	3.5	7.5	5.5	2.9	4355	chr3R	4753225	intron,intron	atms +,CG44098 -	chr3R	4755402	intron,intron	atms +,CG44098 -	chr3R	4757580	intron,exon	atms +,CG44098 -	chr3R_19_4755001	chr3R_4755001	1182-4H
1622	chr3R	4887455	4887512	chr3R	4894857	4894912	rover	13	7400	2.0	2.5	2.2	4.1	7457	chr3R	4887455	intergenic	not near genes	chr3R	4891184	intergenic	not near genes	chr3R	4894912	intergenic	not near genes	chr3R_13_4890001	chr3R_4890001	1182-4H
1627	chr3R	5045822	5045864	chr3R	5052949	5052990	HMS-Beagle	6	7127	7.0	5.5	6.2	0.8	7168	chr3R	5045822	3` UTR	CR43635 -	chr3R	5049406	intergenic	not near genes	chr3R	5052990	intergenic	CR45588 -	chr3R_6_5045001	chr3R_5045001	1182-4H
1628	chr3R	5067957	5068012	chr3R	5073499	5073554	mdg3	13	5541	1.0	3.0	2.0	4.3	5597	chr3R	5067957	intergenic	not near genes	chr3R	5070756	intergenic	not near genes	chr3R	5073554	intergenic	not near genes	chr3R_13_5070001	chr3R_5070001	1182-4H
1634	chr3R	5338378	5338421	chr3R	5343580	5343623	Rt1c	20	5201	7.0	9.0	8.0	2.2	5245	chr3R	5338378	intron	mtd -	chr3R	5341000	intron	mtd -	chr3R	5343623	intron	mtd -	chr3R_20_5340001	chr3R_5340001	1182-4H
1637	chr3R	5445938	5445980	chr3R	5452423	5452465	Burdock	5	6485	2.0	2.5	2.2	1.6	6527	chr3R	5445938	intron	CG14669 +	chr3R	5449202	intron	CG14669 +	chr3R	5452465	intron	CG14669 +	chr3R_5_5445001	chr3R_5445001	1182-4H
1642	chr3R	5745996	5746045	chr3R	5746262	5746311	pogo	14	265	3.0	3.0	3.0	3.5	315	chr3R	5745996	3` UTR	Madm +	chr3R	5746154	3` UTR	Madm +	chr3R	5746311	3` UTR	Madm +	chr3R_14_5745001	chr3R_5745001	1182-4H
1643	chr3R	5747001	5747040	chr3R	5753217	5753256	diver	7	6214	3.0	3.5	3.2	1.7	6255	chr3R	5747001	intergenic	Madm +	chr3R	5750128	intergenic	not near genes	chr3R	5753256	intergenic	CG2091 -	chr3R_7_5750001	chr3R_5750001	1182-4H
1646	chr3R	5809087	5809144	chr3R	5809353	5809410	pogo	21	265	3.0	0.5	1.8	7.5	323	chr3R	5809087	3` UTR	CG11000 +	chr3R	5809248	3` UTR	CG11000 +	chr3R	5809410	3` UTR	CG11000 +	chr3R_21_5805001	chr3R_5805001	1182-4H
1647	chr3R	5822363	5822403	chr3R	5823555	5823595	1360	17	1192	3.0	7.0	5.0	2.8	1232	chr3R	5822363	3` UTR	CG2023 -	chr3R	5822979	3` UTR	CG2023 -	chr3R	5823595	3` UTR	CG2023 -	chr3R_17_5820001	chr3R_5820001	1182-4H
1649	chr3R	5927565	5927591	chr3R	5927800	5927819	pogo	11	250	4.0	3.5	3.8	2.3	254	chr3R	5927565	intron	CG34113 -	chr3R	5927692	intron	CG34113 -	chr3R	5927819	intron	CG34113 -	chr3R_11_5925001	chr3R_5925001	1182-4H
1652	chr3R	6015937	6015993	chr3R	6024443	6024499	Tirant	23	8503	4.5	5.5	5.0	3.8	8562	chr3R	6015937	intergenic	not near genes	chr3R	6020218	intergenic	not near genes	chr3R	6024499	intergenic	not near genes	chr3R_23_6020001	chr3R_6020001	1182-4H
1655	chr3R	6175150	6175192	chr3R	6182447	6182489	HMS-Beagle2	7	7295	3.5	1.0	2.2	2.2	7339	chr3R	6175150	intergenic	Osi1 +	chr3R	6178820	intron	CR45194 +	chr3R	6182489	intergenic	CR45194 +	chr3R_7_6175001	chr3R_6175001	1182-4H
1661	chr3R	6737480	6737526	chr3R	6739285	6739333	Doc	14	1807	4.5	1.5	3.0	3.5	1853	chr3R	6737480	intron	pb -	chr3R	6738406	intron	pb -	chr3R	6739333	intron	pb -	chr3R_14_6735001	chr3R_6735001	1182-4H
1676	chr3R	7694580	7694609	chr3R	7713666	7713695	invader3	5	19083	2.0	5.5	3.8	1.0	19115	chr3R	7694580	3` UTR	Nlg1 +	chr3R	7704138	intergenic	not near genes	chr3R	7713695	intergenic	not near genes	chr3R_5_7700001	chr3R_7700001	1182-4H
1677	chr3R	7729457	7729480	chr3R	7737405	7737443	Stalker2	5	7960	3.5	4.0	3.8	1.0	7986	chr3R	7729457	intergenic	not near genes	chr3R	7733450	intergenic	not near genes	chr3R	7737443	intergenic	not near genes	chr3R_5_7730001	chr3R_7730001	1182-4H
1680	chr3R	7973299	7973335	chr3R	7974386	7974422	1360	9	1086	4.0	3.0	3.5	2.0	1123	chr3R	7973299	intergenic	not near genes	chr3R	7973860	intergenic	not near genes	chr3R	7974422	3` UTR	CD98hc -	chr3R_9_7970001	chr3R_7970001	1182-4H
1683	chr3R	8090542	8090561	chr3R	8094044	8094063	297	6	3500	0.0	3.5	1.8	2.1	3521	chr3R	8090542	intergenic	CR44330 +	chr3R	8092302	intergenic	not near genes	chr3R	8094063	intergenic	CG7900 +	chr3R_6_8090001	chr3R_8090001	1182-4H
1684	chr3R	8094387	8094422	chr3R	8099717	8099752	Transpac	7	5329	3.5	1.5	2.5	2.0	5365	chr3R	8094387	intron	CG7900 +	chr3R	8097070	intron	CG7900 +	chr3R	8099752	intron	CG7900 +	chr3R_7_8095001	chr3R_8095001	1182-4H
1685	chr3R	8101745	8101786	chr3R	8104854	8104895	G2	10	3105	3.5	3.0	3.2	2.4	3150	chr3R	8101745	exon	CG7900 +	chr3R	8103320	intron	CG7900 +	chr3R	8104895	3` UTR	CG7900 +	chr3R_10_8100001	chr3R_8100001	1182-4H
1688	chr3R	8207554	8207583	chr3R	8208402	8208453	F-element	11	860	4.0	4.5	4.2	2.1	899	chr3R	8207554	intergenic	not near genes	chr3R	8208004	intergenic	not near genes	chr3R	8208453	intergenic	not near genes	chr3R_11_8205001	chr3R_8205001	1182-4H
1696	chr3R	8402991	8403028	chr3R	8412171	8412218	roo	15	9184	7.5	4.0	5.8	2.2	9227	chr3R	8402991	intron	CG45263 -	chr3R	8407604	intron	CG45263 -	chr3R	8412218	intron	CG45263 -	chr3R_15_8405001	chr3R_8405001	1182-4H
1698	chr3R	8570475	8570510	chr3R	8575121	8575171	HMS-Beagle	8	4658	0.5	3.5	2.0	2.7	4696	chr3R	8570475	intergenic	not near genes	chr3R	8572823	intergenic	not near genes	chr3R	8575171	intergenic	not near genes	chr3R_8_8570001	chr3R_8570001	1182-4H
1699	chr3R	8601756	8601789	chr3R	8610934	8610967	roo	8	9178	4.5	3.0	3.8	1.7	9211	chr3R	8601756	intron	5-HT2B +	chr3R	8606362	intron	5-HT2B +	chr3R	8610967	intron	5-HT2B +	chr3R_8_8605001	chr3R_8605001	1182-4H
1701	chr3R	9319553	9319600	chr3R	9320013	9320056	jockey	19	458	3.0	3.5	3.2	4.5	503	chr3R	9319553	intron	CG8861 -	chr3R	9319804	intron	CG8861 -	chr3R	9320056	intron	CG8861 -	chr3R_19_9315001	chr3R_9315001	1182-4H
1702	chr3R	9361805	9361839	chr3R	9362065	9362105	pogo	7	265	4.0	2.0	3.0	1.8	300	chr3R	9361805	3` UTR	CG45050 +	chr3R	9361955	3` UTR	CG45050 +	chr3R	9362105	3` UTR	CG45050 +	chr3R_7_9360001	chr3R_9360001	1182-4H
1707	chr3R	9699957	9700001	chr3R	9700071	9700115	1360	11	113	7.0	2.0	4.5	2.0	158	chr3R	9699957	intron	Unc-115a -	chr3R	9700036	intron	Unc-115a -	chr3R	9700115	intron	Unc-115a -	chr3R_11_9700001	chr3R_9700001	1182-4H
1708	chr3R	10255360	10255386	chr3R	10260824	10260835	I-element	7	5461	7.0	4.5	5.8	1.0	5475	chr3R	10255360	3` UTR	Sirt6 -	chr3R	10258098	intron	Sirt6 -	chr3R	10260835	exon	Sirt6 -	chr3R_7_10255001	chr3R_10255001	1182-4H
1714	chr3R	10804149	10804198	chr3R	10811706	10811755	17.6	5	7557	4.0	2.0	3.0	1.2	7606	chr3R	10804149	intergenic	CG14692 -	chr3R	10807952	intergenic	not near genes	chr3R	10811755	3` UTR	CG14693 -	chr3R_5_10805001	chr3R_10805001	1182-4H
1719	chr3R	10957874	10957881	chr3R	10963261	10963283	Rt1c	5	5395	16.0	5.5	10.8	0.4	5409	chr3R	10957874	intergenic	not near genes	chr3R	10960578	intergenic	not near genes	chr3R	10963283	intergenic	not near genes	chr3R_5_10960001	chr3R_10960001	1182-4H
1727	chr3R	11379216	11379259	chr3R	11388396	11388422	roo	4	9176	2.5	4.5	3.5	0.9	9206	chr3R	11379216	intron	pros +	chr3R	11383819	intron	pros +	chr3R	11388422	intron	pros +	chr3R_4_11380001	chr3R_11380001	1182-4H
1733	chr3R	11841047	11841080	chr3R	11846253	11846296	BS	11	5214	9.0	3.5	6.2	1.5	5249	chr3R	11841047	intron	CG6959 -	chr3R	11843672	intron	CG6959 -	chr3R	11846296	intron	CG6959 -	chr3R_11_11840001	chr3R_11840001	1182-4H
1734	chr3R	11957836	11957861	chr3R	11958144	11958152	S-element	7	304	2.0	0.0	1.0	3.5	316	chr3R	11957836	intergenic	not near genes	chr3R	11957994	intergenic	not near genes	chr3R	11958152	intergenic	not near genes	chr3R_7_11955001	chr3R_11955001	1182-4H
1765	chr3R	12920141	12920184	chr3R	12925369	12925412	copia	10	5226	2.0	5.5	3.8	2.1	5271	chr3R	12920141	intron	beat-Vb +	chr3R	12922776	intron	beat-Vb +	chr3R	12925412	intron	beat-Vb +	chr3R_10_12920001	chr3R_12920001	1182-4H
1772	chr3R	13135804	13135856	chr3R	13138004	13138056	pogo	12	2197	4.5	2.5	3.5	2.7	2252	chr3R	13135804	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13136930	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13138056	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R_12_13135001	chr3R_13135001	1182-4H
1773	chr3R	13143017	13143064	chr3R	13148615	13148665	mdg3	15	5596	1.0	6.5	3.8	3.1	5648	chr3R	13143017	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13145841	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13148665	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R_15_13145001	chr3R_13145001	1182-4H
1778	chr3R	13314075	13314123	chr3R	13318889	13318936	Doc	8	4813	3.0	2.0	2.5	2.3	4861	chr3R	13314075	intergenic	not near genes	chr3R	13316506	intergenic	not near genes	chr3R	13318936	intergenic	CG45080 -	chr3R_8_13315001	chr3R_13315001	1182-4H
1780	chr3R	13517198	13517243	chr3R	13520039	13520084	jockey	4	2841	0.5	1.5	1.0	2.0	2886	chr3R	13517198	intergenic	not near genes	chr3R	13518641	intergenic	not near genes	chr3R	13520084	intergenic	not near genes	chr3R_4_13515001	chr3R_13515001	1182-4H
1793	chr3R	14021625	14021680	chr3R	14023467	14023522	S-element	20	1841	5.5	1.5	3.5	4.4	1897	chr3R	14021625	intron	rdx -	chr3R	14022574	intron	rdx -	chr3R	14023522	intron	rdx -	chr3R_20_14020001	chr3R_14020001	1182-4H
1802	chr3R	14180791	14180813	chr3R	14185581	14185603	F-element	5	4790	2.5	2.5	2.5	1.4	4812	chr3R	14180791	intron	Dop1R1 -	chr3R	14183197	intron	Dop1R1 -	chr3R	14185603	intron	Dop1R1 -	chr3R_5_14180001	chr3R_14180001	1182-4H
1803	chr3R	14194410	14194456	chr3R	14203584	14203630	roo	4	9174	5.5	2.5	4.0	0.8	9220	chr3R	14194410	intron	Dop1R1 -	chr3R	14199020	intron	Dop1R1 -	chr3R	14203630	intron	Dop1R1 -	chr3R_4_14195001	chr3R_14195001	1182-4H
1804	chr3R	14246396	14246417	chr3R	14247886	14247938	jockey	9	1503	5.5	1.0	3.2	2.1	1542	chr3R	14246396	intergenic	not near genes	chr3R	14247167	intergenic	not near genes	chr3R	14247938	intergenic	not near genes	chr3R_9_14245001	chr3R_14245001	1182-4H
1823	chr3R	15041408	15041449	chr3R	15045201	15045242	Doc	9	3792	3.0	2.5	2.8	2.4	3834	chr3R	15041408	intergenic	not near genes	chr3R	15043325	intergenic	not near genes	chr3R	15045242	intergenic	not near genes	chr3R_9_15040001	chr3R_15040001	1182-4H
1824	chr3R	15079782	15079830	chr3R	15080048	15080096	pogo	7	264	2.0	1.5	1.8	2.5	314	chr3R	15079782	3` UTR	CG6966 -	chr3R	15079939	3` UTR	CG6966 -	chr3R	15080096	3` UTR	CG6966 -	chr3R_7_15075001	chr3R_15075001	1182-4H
1826	chr3R	15102488	15102527	chr3R	15109771	15109801	412	8	7280	1.5	3.0	2.2	2.5	7313	chr3R	15102488	intron	CG42788 -	chr3R	15106144	intron	CG42788 -	chr3R	15109801	intron	CG42788 -	chr3R_8_15105001	chr3R_15105001	1182-4H
1828	chr3R	15132045	15132066	chr3R	15135130	15135151	Juan	6	3084	4.5	5.5	5.0	1.0	3106	chr3R	15132045	intergenic	CG42788 -	chr3R	15133598	intergenic	not near genes	chr3R	15135151	3` UTR	CG6912 -	chr3R_6_15130001	chr3R_15130001	1182-4H
1829	chr3R	15162523	15162547	chr3R	15167316	15167340	F-element	4	4793	7.5	1.0	4.2	0.8	4817	chr3R	15162523	intron	Gyc88E +	chr3R	15164932	intron	Gyc88E +	chr3R	15167340	intron	Gyc88E +	chr3R_4_15160001	chr3R_15160001	1182-4H
1835	chr3R	15601151	15601181	chr3R	15608693	15608728	412	9	7546	7.5	6.5	7.0	1.1	7577	chr3R	15601151	intergenic	not near genes	chr3R	15604940	intergenic	not near genes	chr3R	15608728	intergenic	not near genes	chr3R_9_15600001	chr3R_15600001	1182-4H
1836	chr3R	15618734	15618759	chr3R	15626233	15626253	blood	8	7497	1.0	4.0	2.5	2.3	7519	chr3R	15618734	intergenic	not near genes	chr3R	15622494	intergenic	not near genes	chr3R	15626253	intergenic	not near genes	chr3R_8_15620001	chr3R_15620001	1182-4H
1853	chr3R	16756297	16756345	chr3R	16762513	16762561	diver	12	6212	3.0	1.0	2.0	4.0	6264	chr3R	16756297	intron	bxd -	chr3R	16759429	intron	bxd -	chr3R	16762561	intron	bxd -	chr3R_12_16755001	chr3R_16755001	1182-4H
1869	chr3R	17294646	17294689	chr3R	17295099	17295142	BS	6	453	5.0	2.5	3.8	1.2	496	chr3R	17294646	intergenic	not near genes	chr3R	17294894	intergenic	not near genes	chr3R	17295142	intergenic	not near genes	chr3R_6_17290001	chr3R_17290001	1182-4H
1872	chr3R	17346667	17346707	chr3R	17348255	17348295	F-element	6	1586	1.0	3.5	2.2	1.9	1628	chr3R	17346667	intron	beat-IIa -	chr3R	17347481	intron	beat-IIa -	chr3R	17348295	intron	beat-IIa -	chr3R_6_17345001	chr3R_17345001	1182-4H
1879	chr3R	17591275	17591320	chr3R	17591736	17591779	F-element	5	460	3.5	4.0	3.8	1.0	504	chr3R	17591275	intergenic	not near genes	chr3R	17591527	intergenic	not near genes	chr3R	17591779	intergenic	not near genes	chr3R_5_17590001	chr3R_17590001	1182-4H
1880	chr3R	17638299	17638344	chr3R	17638809	17638848	roo	16	509	2.0	4.0	3.0	4.0	549	chr3R	17638299	intron	CG43175 +	chr3R	17638574	intron	CG43175 +	chr3R	17638848	intron,intron	CG43175 +,CR45222 +	chr3R_16_17635001	chr3R_17635001	1182-4H
1885	chr3R	17925845	17925876	chr3R	17927337	17927368	hobo	7	1491	4.5	6.5	5.5	1.1	1523	chr3R	17925845	intron	cpo +	chr3R	17926606	intron	cpo +	chr3R	17927368	intron	cpo +	chr3R_7_17925001	chr3R_17925001	1182-4H
1887	chr3R	18061576	18061602	chr3R	18063169	18063194	F-element	10	1592	0.5	2.0	1.2	4.5	1618	chr3R	18061576	intergenic	not near genes	chr3R	18062385	intergenic	not near genes	chr3R	18063194	intergenic	not near genes	chr3R_10_18060001	chr3R_18060001	1182-4H
1895	chr3R	18606493	18606525	chr3R	18610744	18610782	F-element	7	4256	3.5	3.0	3.2	1.7	4289	chr3R	18606493	intron,intron	qin +,CG14304 -	chr3R	18608638	intron,intron	qin +,CG14304 -	chr3R	18610782	intron,intron	qin +,CG14304 -	chr3R_7_18605001	chr3R_18605001	1182-4H
1901	chr3R	19193003	19193003	chr3R	19197279	19197332	F-element	9	4297	1.5	3.5	2.5	2.6	4329	chr3R	19193003	intron	CG31475 +	chr3R	19195168	intron	CG31475 +	chr3R	19197332	intron	CG31475 +	chr3R_9_19195001	chr3R_19195001	1182-4H
1918	chr3R	20109513	20109564	chr3R	20114744	20114785	copia	6	5229	3.5	2.5	3.0	1.5	5272	chr3R	20109513	intergenic	not near genes	chr3R	20112149	intergenic	not near genes	chr3R	20114785	intergenic	CG10887 +	chr3R_6_20110001	chr3R_20110001	1182-4H
1919	chr3R	20156674	20156719	chr3R	20165869	20165914	roo	9	9194	4.5	3.5	4.0	1.8	9240	chr3R	20156674	intergenic	not near genes	chr3R	20161294	intergenic	not near genes	chr3R	20165914	intergenic	not near genes	chr3R_9_20160001	chr3R_20160001	1182-4H
1923	chr3R	20266492	20266540	chr3R	20272988	20273036	Burdock	5	6496	4.0	2.0	3.0	1.2	6544	chr3R	20266492	intron	cic +	chr3R	20269764	intron	cic +	chr3R	20273036	intron	cic +	chr3R_5_20265001	chr3R_20265001	1182-4H
1926	chr3R	20330981	20331015	chr3R	20331492	20331526	roo	5	510	5.0	2.0	3.5	1.1	545	chr3R	20330981	intergenic	Sirt2 +	chr3R	20331254	intergenic	Sirt2 +	chr3R	20331526	intergenic	not near genes	chr3R_5_20330001	chr3R_20330001	1182-4H
1932	chr3R	20506574	20506608	chr3R	20507402	20507435	BS	8	828	0.5	4.5	2.5	2.3	861	chr3R	20506574	intergenic	Or92a +	chr3R	20507004	intergenic	CG4288 -	chr3R	20507435	3` UTR	CG4288 -	chr3R_8_20505001	chr3R_20505001	1182-4H
1942	chr3R	20854447	20854514	chr3R	20859267	20859284	Doc	8	4809	0.0	4.0	2.0	2.7	4837	chr3R	20854447	intron	Ir93a -	chr3R	20856866	intron	Ir93a -	chr3R	20859284	exon	Ir93a -	chr3R_8_20855001	chr3R_20855001	1182-4H
1949	chr3R	21141653	21141707	chr3R	21150157	21150212	Tirant	17	8501	2.5	4.0	3.2	4.0	8559	chr3R	21141653	intron	SNF4Agamma +	chr3R	21145932	intron	SNF4Agamma +	chr3R	21150212	intron	SNF4Agamma +	chr3R_17_21145001	chr3R_21145001	1182-4H
1955	chr3R	21761105	21761132	chr3R	21768522	21768534	mdg1	9	7412	13.0	10.0	11.5	0.7	7429	chr3R	21761105	exon	CG42335 +	chr3R	21764820	intron	CG42335 +	chr3R	21768534	exon	CG42335 +	chr3R_9_21760001	chr3R_21760001	1182-4H
1956	chr3R	21761135	21761155	chr3R	21768512	21768532	mdg1	11	7397	6.5	8.0	7.2	1.3	7397	chr3R	21761135	exon	CG42335 +	chr3R	21764834	intron	CG42335 +	chr3R	21768532	exon	CG42335 +	chr3R_11_21760001	chr3R_21760001	1182-4H
1977	chr3R	22234662	22234701	chr3R	22236006	22236010	pogo	7	1337	2.0	2.5	2.2	2.2	1348	chr3R	22234662	intron	SKIP +	chr3R	22235336	intron	SKIP +	chr3R	22236010	intron	SKIP +	chr3R_7_22235001	chr3R_22235001	1182-4H
1978	chr3R	22239470	22239522	chr3R	22248555	22248592	roo	10	9076	2.5	0.0	1.2	4.5	9122	chr3R	22239470	intron	SKIP +	chr3R	22244031	intron	SKIP +	chr3R	22248592	intron	SKIP +	chr3R_10_22240001	chr3R_22240001	1182-4H
1985	chr3R	22450521	22450572	chr3R	22453186	22453237	NOF	17	2664	4.5	6.0	5.2	2.7	2716	chr3R	22450521	intron	CG34376 +	chr3R	22451879	intron	CG34376 +	chr3R	22453237	intron	CG34376 +	chr3R_17_22450001	chr3R_22450001	1182-4H
2007	chr3R	23558376	23558427	chr3R	23560180	23560232	Bari1	23	1806	1.5	1.5	1.5	9.2	1856	chr3R	23558376	intron	beat-IV +	chr3R	23559304	intron	beat-IV +	chr3R	23560232	intron	beat-IV +	chr3R_23_23555001	chr3R_23555001	1182-4H
2010	chr3R	23684672	23684727	chr3R	23685181	23685238	roo	19	504	4.5	9.0	6.8	2.4	566	chr3R	23684672	exon	CG18754 +	chr3R	23684955	intron	CG18754 +	chr3R	23685238	exon	CG18754 +	chr3R_19_23680001	chr3R_23680001	1182-4H
2013	chr3R	23835385	23835391	chr3R	23844560	23844566	roo	4	9175	8.0	0.0	4.0	0.8	9181	chr3R	23835385	intron	CG34355 +	chr3R	23839976	intron	CG34355 +	chr3R	23844566	intron	CG34355 +	chr3R_4_23835001	chr3R_23835001	1182-4H
2014	chr3R	23851066	23851076	chr3R	23858758	23858768	opus	4	7692	1.5	0.5	1.0	2.0	7702	chr3R	23851066	3` UTR	CG34355 +	chr3R	23854917	intergenic	not near genes	chr3R	23858768	intergenic	not near genes	chr3R_4_23850001	chr3R_23850001	1182-4H
2020	chr3R	24072074	24072119	chr3R	24072525	24072571	jockey	6	446	6.0	0.0	3.0	1.5	497	chr3R	24072074	intron	4EHP -	chr3R	24072322	intron	4EHP -	chr3R	24072571	intron	4EHP -	chr3R_6_24070001	chr3R_24070001	1182-4H
2021	chr3R	24076903	24076947	chr3R	24078388	24078404	hobo	9	1481	4.5	6.0	5.2	1.5	1501	chr3R	24076903	intron	4EHP -	chr3R	24077654	intron	4EHP -	chr3R	24078404	intron	4EHP -	chr3R_9_24075001	chr3R_24075001	1182-4H
2025	chr3R	24207198	24207240	chr3R	24212299	24212341	flea	14	5099	12.0	3.5	7.8	1.6	5143	chr3R	24207198	intron	twin -	chr3R	24209770	intron	twin -	chr3R	24212341	intron	twin -	chr3R_14_24205001	chr3R_24205001	1182-4H
2030	chr3R	24493279	24493308	chr3R	24493532	24493561	BS	6	253	5.0	6.0	5.5	0.9	282	chr3R	24493279	intergenic	not near genes	chr3R	24493420	intergenic	not near genes	chr3R	24493561	intergenic	not near genes	chr3R_6_24490001	chr3R_24490001	1182-4H
2033	chr3R	24594652	24594667	chr3R	24594917	24594931	pogo	7	264	2.5	4.0	3.2	1.7	279	chr3R	24594652	intron	mld +	chr3R	24594792	intron	mld +	chr3R	24594931	intron	mld +	chr3R_7_24590001	chr3R_24590001	1182-4H
2038	chr3R	24730073	24730119	chr3R	24732476	24732493	Doc	5	2389	3.5	0.0	1.8	1.8	2420	chr3R	24730073	intron	tok +	chr3R	24731283	intron	tok +	chr3R	24732493	intron	tok +	chr3R_5_24730001	chr3R_24730001	1182-4H
2044	chr3R	24927108	24927143	chr3R	24931924	24931959	Doc	17	4811	9.0	8.5	8.8	1.7	4851	chr3R	24927108	intergenic	Trf4-2 +	chr3R	24929534	intergenic	not near genes	chr3R	24931959	intergenic	CG11771 +	chr3R_17_24925001	chr3R_24925001	1182-4H
2049	chr3R	25324365	25324389	chr3R	25328955	25328979	Doc	10	4590	5.0	4.0	4.5	1.8	4614	chr3R	25324365	exon	CHKov1 -	chr3R	25326672	intron	CHKov1 -	chr3R	25328979	exon	CHKov1 -	chr3R_10_25325001	chr3R_25325001	1182-4H
2063	chr3R	25725809	25725842	chr3R	25734994	25735027	roo	8	9185	3.5	6.5	5.0	1.3	9218	chr3R	25725809	intron	LpR2 -	chr3R	25730418	intron	LpR2 -	chr3R	25735027	intron	LpR2 -	chr3R_8_25730001	chr3R_25730001	1182-4H
2064	chr3R	25832672	25832720	chr3R	25841879	25841926	roo	9	9207	4.0	4.5	4.2	1.7	9254	chr3R	25832672	exon	alpha4GT2 +	chr3R	25837299	intron	alpha4GT2 +	chr3R	25841926	exon	alpha4GT2 +	chr3R_9_25835001	chr3R_25835001	1182-4H
2070	chr3R	26376301	26376340	chr3R	26385486	26385525	roo	11	9182	7.0	1.0	4.0	2.2	9224	chr3R	26376301	intergenic	not near genes	chr3R	26380913	intergenic	not near genes	chr3R	26385525	intergenic	not near genes	chr3R_11_26380001	chr3R_26380001	1182-4H
2073	chr3R	26510505	26510527	chr3R	26519579	26519607	roo	5	9079	4.0	3.0	3.5	1.1	9102	chr3R	26510505	intron	plum -	chr3R	26515056	intron	plum -	chr3R	26519607	intron,5` UTR	plum -,CR45226 +	chr3R_5_26515001	chr3R_26515001	1182-4H
2077	chr3R	26558300	26558361	chr3R	26565638	26565678	Stalker4	14	7330	4.0	5.0	4.5	2.5	7378	chr3R	26558300	intron	scrib +	chr3R	26561989	intron	scrib +	chr3R	26565678	intron	scrib +	chr3R_14_26560001	chr3R_26560001	1182-4H
2080	chr3R	26642717	26642748	chr3R	26643135	26643166	jockey	6	418	6.5	6.5	6.5	0.8	449	chr3R	26642717	intergenic	not near genes	chr3R	26642942	intergenic	not near genes	chr3R	26643166	intergenic	not near genes	chr3R_6_26640001	chr3R_26640001	1182-4H
2095	chr3R	27007394	27007434	chr3R	27016554	27016594	roo	9	9159	2.0	2.0	2.0	3.0	9200	chr3R	27007394	intron	RYa-R +	chr3R	27011994	intron	RYa-R +	chr3R	27016594	intron	RYa-R +	chr3R_9_27010001	chr3R_27010001	1182-4H
2099	chr3R	27140489	27140543	chr3R	27148124	27148178	412	9	7635	1.5	0.5	1.0	4.5	7689	chr3R	27140489	intron	CG6051 -	chr3R	27144334	intron	CG6051 -	chr3R	27148178	intron	CG6051 -	chr3R_9_27140001	chr3R_27140001	1182-4H
2105	chr3R	27342771	27342825	chr3R	27351377	27351431	Tirant	15	8604	3.5	2.0	2.8	3.9	8660	chr3R	27342771	intron	CG42534 +	chr3R	27347101	intron	CG42534 +	chr3R	27351431	intron	CG42534 +	chr3R_15_27345001	chr3R_27345001	1182-4H
2112	chr3R	27725547	27725586	chr3R	27731014	27731053	I-element	4	5467	3.5	5.0	4.2	0.8	5506	chr3R	27725547	intergenic	not near genes	chr3R	27728300	intergenic	not near genes	chr3R	27731053	intergenic	not near genes	chr3R_4_27725001	chr3R_27725001	1182-4H
2118	chr3R	27791632	27791647	chr3R	27794797	27794820	Rt1c	5	3166	11.0	10.5	10.8	0.4	3188	chr3R	27791632	intron	CG34353 -	chr3R	27793226	intron	CG34353 -	chr3R	27794820	intron	CG34353 -	chr3R_5_27790001	chr3R_27790001	1182-4H
2121	chr3R	27856754	27856770	chr3R	27858256	27858278	hopper2	6	1506	1.0	2.0	1.5	2.4	1524	chr3R	27856754	intron	CG34353 -	chr3R	27857516	intron	CG34353 -	chr3R	27858278	intron	CG34353 -	chr3R_6_27855001	chr3R_27855001	1182-4H
2122	chr3R	27862935	27862984	chr3R	27868264	27868314	Transpac	7	5324	3.0	2.5	2.8	1.8	5379	chr3R	27862935	intron	CG34353 -	chr3R	27865624	intron	CG34353 -	chr3R	27868314	intron	CG34353 -	chr3R_7_27865001	chr3R_27865001	1182-4H
2123	chr3R	27875680	27875729	chr3R	27882760	27882809	297	16	7080	1.0	5.0	3.0	4.0	7129	chr3R	27875680	intron	CG34353 -	chr3R	27879244	intron	CG34353 -	chr3R	27882809	intron	CG34353 -	chr3R_16_27875001	chr3R_27875001	1182-4H
2126	chr3R	28068486	28068520	chr3R	28073952	28073982	I-element	7	5466	0.0	4.5	2.2	2.2	5496	chr3R	28068486	intron	CG34362 +	chr3R	28071234	intron	CG34362 +	chr3R	28073982	intron	CG34362 +	chr3R_7_28070001	chr3R_28070001	1182-4H
2131	chr3R	28173656	28173700	chr3R	28181111	28181150	mdg1	10	7453	1.5	2.5	2.0	3.3	7494	chr3R	28173656	intron	CG34354 +	chr3R	28177403	intron	CG34354 +	chr3R	28181150	intron	CG34354 +	chr3R_10_28175001	chr3R_28175001	1182-4H
2132	chr3R	28253338	28253357	chr3R	28255853	28255887	jockey	6	2530	2.0	5.5	3.8	1.2	2549	chr3R	28253338	intergenic	not near genes	chr3R	28254612	intergenic	not near genes	chr3R	28255887	intergenic	not near genes	chr3R_6_28250001	chr3R_28250001	1182-4H
2134	chr3R	28302086	28302116	chr3R	28302553	28302583	jockey	9	467	4.0	3.0	3.5	2.0	497	chr3R	28302086	intergenic	not near genes	chr3R	28302334	intergenic	not near genes	chr3R	28302583	intergenic	not near genes	chr3R_9_28300001	chr3R_28300001	1182-4H
2149	chr3R	28792849	28792901	chr3R	28797969	28798021	jockey	9	5116	3.5	1.5	2.5	2.6	5172	chr3R	28792849	intergenic	not near genes	chr3R	28795435	intergenic	not near genes	chr3R	28798021	intergenic	not near genes	chr3R_9_28795001	chr3R_28795001	1182-4H
2157	chr3R	29079358	29079381	chr3R	29080755	29080778	NOF	4	1397	6.5	3.0	4.8	0.7	1420	chr3R	29079358	intron	CG11873 +	chr3R	29080068	intron	CG11873 +	chr3R	29080778	intron	CG11873 +	chr3R_4_29080001	chr3R_29080001	1182-4H
2183	chr3R	29760348	29760390	chr3R	29761574	29761616	pogo	14	1223	2.5	1.0	1.8	5.0	1268	chr3R	29760348	intergenic	not near genes	chr3R	29760982	intergenic	not near genes	chr3R	29761616	intergenic	not near genes	chr3R_14_29760001	chr3R_29760001	1182-4H
2187	chr3R	29881997	29882043	chr3R	29891179	29891225	roo	9	9182	4.0	6.0	5.0	1.5	9228	chr3R	29881997	intron	CG31038 +	chr3R	29886611	intron	CG31038 +	chr3R	29891225	intron	CG31038 +	chr3R_9_29885001	chr3R_29885001	1182-4H
2191	chr3R	30084853	30084875	chr3R	30086334	30086362	hobo	4	1488	0.0	3.0	1.5	1.6	1509	chr3R	30084853	intron	sima +	chr3R	30085608	intron	sima +	chr3R	30086362	intron	sima +	chr3R_4_30085001	chr3R_30085001	1182-4H
2200	chr3R	30317311	30317352	chr3R	30324926	30324969	roo	6	7614	1.5	1.0	1.2	2.7	7658	chr3R	30317311	intron	hdc +	chr3R	30321140	intron	hdc +	chr3R	30324969	intron	hdc +	chr3R_6_30320001	chr3R_30320001	1182-4H
2203	chr3R	30396193	30396242	chr3R	30404484	30404533	roo	12	8290	3.5	4.0	3.8	2.5	8340	chr3R	30396193	intergenic	not near genes	chr3R	30400363	intergenic	not near genes	chr3R	30404533	5` UTR	CR45570 +	chr3R_12_30400001	chr3R_30400001	1182-4H
2205	chr3R	30480450	30480506	chr3R	30482943	30482999	jockey	18	2492	5.5	2.5	4.0	3.6	2549	chr3R	30480450	intron	PH4alphaEFB +	chr3R	30481724	intron	PH4alphaEFB +	chr3R	30482999	intron	PH4alphaEFB +	chr3R_18_30480001	chr3R_30480001	1182-4H
2214	chr3R	30679499	30679545	chr3R	30686993	30687039	blood	11	7492	1.5	5.0	3.2	2.6	7540	chr3R	30679499	intergenic	not near genes	chr3R	30683269	intergenic	not near genes	chr3R	30687039	intergenic	not near genes	chr3R_11_30680001	chr3R_30680001	1182-4H
2223	chr3R	31074210	31074256	chr3R	31081833	31081879	springer	11	7623	5.0	2.5	3.8	2.3	7669	chr3R	31074210	intron	Sox100B +	chr3R	31078044	intron	Sox100B +	chr3R	31081879	intron	Sox100B +	chr3R_11_31075001	chr3R_31075001	1182-4H
2226	chr3R	31279359	31279403	chr3R	31285575	31285619	diver	9	6213	3.5	4.0	3.8	1.9	6260	chr3R	31279359	intergenic	not near genes	chr3R	31282489	intergenic	not near genes	chr3R	31285619	intergenic	not near genes	chr3R_9_31280001	chr3R_31280001	1182-4H
2227	chr3R	31413083	31413113	chr3R	31418298	31418316	copia	9	5219	7.0	0.5	3.8	1.9	5233	chr3R	31413083	intron	Gprk2 +	chr3R	31415700	intron	Gprk2 +	chr3R	31418316	intron	Gprk2 +	chr3R_9_31415001	chr3R_31415001	1182-4H
2232	chr3R	31691513	31691559	chr3R	31696304	31696350	Doc	19	4787	2.0	7.5	4.8	3.3	4837	chr3R	31691513	intergenic	not near genes	chr3R	31693932	intergenic	not near genes	chr3R	31696350	intergenic	not near genes	chr3R_19_31690001	chr3R_31690001	1182-4H
2235	chr4	76477	76511	chr4	81945	81969	I-element	4	5463	4.0	1.5	2.8	1.1	5492	chr4	76477	intron	pan +	chr4	79223	intron	pan +	chr4	81969	intron	pan +	chr4_4_75001	chr4_75001	1182-4H
2238	chr4	671601	671631	chr4	680204	680239	Tirant	6	8606	5.0	5.0	5.0	1.0	8638	chr4	671601	intron	CG11360 +	chr4	675920	intron	CG11360 +	chr4	680239	intron	CG11360 +	chr4_6_675001	chr4_675001	1182-4H
2240	chrX	318454	318483	chrX	323565	323594	flea	11	5110	4.0	7.0	5.5	1.7	5140	chrX	318454	intron,intron	CG3777 +,CG32816 -	chrX	321024	intron,intron	CG3777 +,CG32816 -	chrX	323594	intron,intron	CG3777 +,CG32816 -	chrX_11_320001	chrX_320001	1182-4H
2243	chrX	428398	428440	chrX	434608	434650	3S18	8	6206	4.5	2.5	3.5	1.8	6252	chrX	428398	intron	CG32816 -	chrX	431524	intron	CG32816 -	chrX	434650	intron	CG32816 -	chrX_8_430001	chrX_430001	1182-4H
2246	chrX	551401	551450	chrX	558987	559037	412	20	7585	6.5	2.5	4.5	3.6	7636	chrX	551401	intron	Appl +	chrX	555219	intron	Appl +	chrX	559037	intron	Appl +	chrX_20_555001	chrX_555001	1182-4H
2249	chrX	812271	812292	chrX	817897	817939	297	5	5648	2.5	3.0	2.8	1.3	5668	chrX	812271	intron	CG43867 -	chrX	815105	intron	CG43867 -	chrX	817939	intron	CG43867 -	chrX_5_815001	chrX_815001	1182-4H
2250	chrX	827587	827631	chrX	835404	835448	roo	6	7815	3.0	1.5	2.2	1.9	7861	chrX	827587	intron	CG43867 -	chrX	831518	intron	CG43867 -	chrX	835448	intron	CG43867 -	chrX_6_830001	chrX_830001	1182-4H
2251	chrX	906678	906732	chrX	908492	908540	S-element	16	1813	5.5	9.0	7.2	2.0	1862	chrX	906678	intron	CG43867 -	chrX	907609	intron	CG43867 -	chrX	908540	intron	CG43867 -	chrX_16_905001	chrX_905001	1182-4H
2254	chrX	1357762	1357797	chrX	1367957	1367992	Doc	5	10195	5.5	4.0	4.8	0.9	10230	chrX	1357762	intergenic	png -	chrX	1362877	intergenic	not near genes	chrX	1367992	intergenic	not near genes	chrX_5_1360001	chrX_1360001	1182-4H
2256	chrX	1518018	1518068	chrX	1523443	1523495	jockey	13	5424	5.5	3.0	4.2	2.5	5477	chrX	1518018	intergenic	inc +	chrX	1520756	intergenic	not near genes	chrX	1523495	intergenic	not near genes	chrX_13_1520001	chrX_1520001	1182-4H
2261	chrX	1954863	1954918	chrX	1962828	1962876	Stalker2	13	7958	4.5	4.0	4.2	2.5	8013	chrX	1954863	intron	Hr4 +	chrX	1958870	intron	Hr4 +	chrX	1962876	intron	Hr4 +	chrX_13_1955001	chrX_1955001	1182-4H
2262	chrX	2399818	2399871	chrX	2408195	2408237	roo	15	8370	9.5	0.0	4.8	2.6	8419	chrX	2399818	intergenic	not near genes	chrX	2404028	intergenic	not near genes	chrX	2408237	intergenic	not near genes	chrX_15_2400001	chrX_2400001	1182-4H
2264	chrX	2610366	2610414	chrX	2617507	2617556	HMS-Beagle	4	7142	2.5	3.0	2.8	1.1	7190	chrX	2610366	intergenic	CG8636 -	chrX	2613961	intergenic	not near genes	chrX	2617556	intergenic	Tsp3A -	chrX_4_2610001	chrX_2610001	1182-4H
2267	chrX	2844876	2844931	chrX	2852311	2852366	mdg1	11	7433	2.5	5.0	3.8	2.3	7490	chrX	2844876	intron	kirre +	chrX	2848621	intron	kirre +	chrX	2852366	intron	kirre +	chrX_11_2845001	chrX_2845001	1182-4H
2270	chrX	3058002	3058048	chrX	3058268	3058314	pogo	6	264	4.0	2.5	3.2	1.4	312	chrX	3058002	intron	kirre +	chrX	3058158	intron	kirre +	chrX	3058314	intron	kirre +	chrX_6_3055001	chrX_3055001	1182-4H
2273	chrX	3414997	3415045	chrX	3421205	3421255	3S18	9	6209	4.0	2.0	3.0	2.2	6258	chrX	3414997	intron,intron	CR44999 +,CG12535 -	chrX	3418126	intron,intron	CR44999 +,CG12535 -	chrX	3421255	intron,intron	CR44999 +,CG12535 -	chrX_9_3415001	chrX_3415001	1182-4H
2274	chrX	3493066	3493118	chrX	3502250	3502302	roo	21	9184	4.5	7.0	5.8	3.1	9236	chrX	3493066	intron,intron	CR44999 +,Gas8 -	chrX	3497684	intron,intron	CR44999 +,Gas8 -	chrX	3502302	intron,intron	CR44999 +,Gas8 -	chrX_21_3495001	chrX_3495001	1182-4H
2278	chrX	3726755	3726790	chrX	3730177	3730212	NOF	11	3420	5.0	8.0	6.5	1.5	3457	chrX	3726755	intron	tlk +	chrX	3728484	intron	tlk +	chrX	3730212	intron	tlk +	chrX_11_3725001	chrX_3725001	1182-4H
2279	chrX	3842342	3842353	chrX	3842573	3842591	pogo	8	237	7.0	4.5	5.8	1.2	249	chrX	3842342	intron	ec +	chrX	3842466	intron	ec +	chrX	3842591	intron	ec +	chrX_8_3840001	chrX_3840001	1182-4H
2284	chrX	3986843	3986893	chrX	3994501	3994549	412	11	7656	4.0	4.5	4.2	2.1	7706	chrX	3986843	intergenic	not near genes	chrX	3990696	intergenic	not near genes	chrX	3994549	intergenic	not near genes	chrX_11_3990001	chrX_3990001	1182-4H
2289	chrX	4157878	4157919	chrX	4164955	4164997	297	13	7078	10.5	4.5	7.5	1.5	7119	chrX	4157878	intron	Fas2 -	chrX	4161438	intron	Fas2 -	chrX	4164997	intron	Fas2 -	chrX_13_4160001	chrX_4160001	1182-4H
2295	chrX	4700384	4700418	chrX	4700752	4700786	jockey	8	367	5.0	4.0	4.5	1.5	402	chrX	4700384	3` UTR	ctp +	chrX	4700585	3` UTR	ctp +	chrX	4700786	3` UTR	ctp +	chrX_8_4700001	chrX_4700001	1182-4H
2298	chrX	4763231	4763278	chrX	4763744	4763791	Stalker4	6	510	4.0	2.0	3.0	1.5	560	chrX	4763231	intergenic	not near genes	chrX	4763511	intergenic	not near genes	chrX	4763791	intergenic	not near genes	chrX_6_4760001	chrX_4760001	1182-4H
2299	chrX	4792374	4792388	chrX	4792832	4792846	jockey	4	458	4.5	6.0	5.2	0.6	472	chrX	4792374	intergenic	not near genes	chrX	4792610	intergenic	not near genes	chrX	4792846	intergenic	not near genes	chrX_4_4790001	chrX_4790001	1182-4H
2301	chrX	4827951	4827984	chrX	4835347	4835380	Stalker4	7	7395	3.0	6.0	4.5	1.3	7429	chrX	4827951	intergenic	not near genes	chrX	4831666	intergenic	not near genes	chrX	4835380	intergenic	not near genes	chrX_7_4830001	chrX_4830001	1182-4H
2302	chrX	4827990	4827993	chrX	4835344	4835389	Stalker4	8	7372	3.0	5.0	4.0	1.6	7399	chrX	4827990	intergenic	not near genes	chrX	4831690	intergenic	not near genes	chrX	4835389	intergenic	not near genes	chrX_8_4830001	chrX_4830001	1182-4H
2304	chrX	4990017	4990058	chrX	4997256	4997297	roo	7	7239	4.5	4.0	4.2	1.3	7280	chrX	4990017	intron	CR44833 -	chrX	4993657	intron	CR44833 -	chrX	4997297	intron	CR44833 -	chrX_7_4990001	chrX_4990001	1182-4H
2305	chrX	5096253	5096303	chrX	5103843	5103893	springer	11	7576	6.5	3.0	4.8	1.9	7640	chrX	5096253	intron,intron	CG15465 +,rg +	chrX	5100073	intron,intron	CG15465 +,rg +	chrX	5103893	intron,intron	CG15465 +,rg +	chrX_11_5100001	chrX_5100001	1182-4H
2313	chrX	5883788	5883832	chrX	5884054	5884098	pogo	6	266	1.5	2.0	1.8	2.1	310	chrX	5883788	intron	CR45668 -	chrX	5883943	intron	CR45668 -	chrX	5884098	intron	CR45668 -	chrX_6_5880001	chrX_5880001	1182-4H
2314	chrX	5884144	5884190	chrX	5884410	5884456	pogo	11	266	1.5	2.0	1.8	3.9	312	chrX	5884144	intron	CR45668 -	chrX	5884300	intron	CR45668 -	chrX	5884456	intron	CR45668 -	chrX_11_5880001	chrX_5880001	1182-4H
2318	chrX	6335213	6335232	chrX	6337748	6337767	Tirant	4	2535	0.0	2.5	1.2	1.8	2554	chrX	6335213	intergenic	not near genes	chrX	6336490	intergenic	not near genes	chrX	6337767	5` UTR	CG3842 +	chrX_4_6335001	chrX_6335001	1182-4H
2321	chrX	6392859	6392897	chrX	6397648	6397680	Doc	9	4786	3.0	5.5	4.2	1.7	4821	chrX	6392859	intergenic	not near genes	chrX	6395270	intergenic	not near genes	chrX	6397680	intergenic	not near genes	chrX_9_6395001	chrX_6395001	1182-4H
2324	chrX	6562796	6562848	chrX	6571303	6571355	Tirant	29	8506	6.5	6.0	6.2	4.0	8559	chrX	6562796	intron	CG34417 +	chrX	6567076	intron	CG34417 +	chrX	6571355	intron	CG34417 +	chrX_29_6565001	chrX_6565001	1182-4H
2335	chrX	7023589	7023628	chrX	7031002	7031043	Tabor	7	7414	3.0	4.5	3.8	1.5	7454	chrX	7023589	intron	CG12541 -	chrX	7027316	intron	CG12541 -	chrX	7031043	intron	CG12541 -	chrX_7_7025001	chrX_7025001	1182-4H
2336	chrX	7125224	7125264	chrX	7134408	7134448	roo	7	9184	0.0	1.5	0.8	3.9	9224	chrX	7125224	intergenic	not near genes	chrX	7129836	intergenic	not near genes	chrX	7134448	intergenic	not near genes	chrX_7_7125001	chrX_7125001	1182-4H
2340	chrX	7702885	7702924	chrX	7703349	7703388	jockey	7	463	9.5	5.5	7.5	0.8	503	chrX	7702885	intron	CHES-1-like -	chrX	7703136	intron	CHES-1-like -	chrX	7703388	intron	CHES-1-like -	chrX_7_7700001	chrX_7700001	1182-4H
2341	chrX	7845701	7845743	chrX	7847217	7847259	hopper2	5	1516	3.0	4.5	3.8	1.0	1558	chrX	7845701	intergenic	not near genes	chrX	7846480	intergenic	not near genes	chrX	7847259	intergenic	not near genes	chrX_5_7845001	chrX_7845001	1182-4H
2344	chrX	8364845	8364873	chrX	8365267	8365295	BS	6	422	4.5	7.0	5.8	0.9	450	chrX	8364845	intron	nAChRalpha3 -	chrX	8365070	intron	nAChRalpha3 -	chrX	8365295	intron	nAChRalpha3 -	chrX_6_8365001	chrX_8365001	1182-4H
2356	chrX	8922305	8922348	chrX	8922764	8922797	jockey	10	458	7.0	4.0	5.5	1.5	492	chrX	8922305	intron	rdgA +	chrX	8922551	intron	rdgA +	chrX	8922797	intron	rdgA +	chrX_10_8920001	chrX_8920001	1182-4H
2358	chrX	8948750	8948780	chrX	8956285	8956315	roo	6	7534	1.0	2.5	1.8	2.1	7565	chrX	8948750	intron	rdgA +	chrX	8952532	intron	rdgA +	chrX	8956315	intron	rdgA +	chrX_6_8950001	chrX_8950001	1182-4H
2363	chrX	9508117	9508157	chrX	9509658	9509700	jockey	7	1541	2.5	2.5	2.5	2.0	1583	chrX	9508117	intron	CG32700 -	chrX	9508908	intron	CG32700 -	chrX	9509700	intron	CG32700 -	chrX_7_9505001	chrX_9505001	1182-4H
2365	chrX	9575774	9575822	chrX	9576115	9576161	mdg3	11	345	9.5	6.0	7.8	1.2	387	chrX	9575774	intron,exon	CG32699 -,CG42395 -	chrX	9575968	intron,intron	CG32699 -,CG42395 -	chrX	9576161	intron,5` UTR	CG32699 -,CG42395 -	chrX_11_9575001	chrX_9575001	1182-4H
2373	chrX	10267296	10267326	chrX	10276471	10276501	roo	5	9175	0.0	0.5	0.2	4.2	9205	chrX	10267296	3` UTR	alpha-Man-I -	chrX	10271898	intron	alpha-Man-I -	chrX	10276501	3` UTR	alpha-Man-I -	chrX_5_10270001	chrX_10270001	1182-4H
2376	chrX	10348782	10348829	chrX	10356372	10356386	springer	6	7574	6.0	9.5	7.8	0.7	7604	chrX	10348782	intergenic	snoRNA:U3:9B +	chrX	10352584	intergenic	not near genes	chrX	10356386	intergenic	l(1)G0289 -	chrX_6_10350001	chrX_10350001	1182-4H
2378	chrX	10550836	10550877	chrX	10552323	10552357	hobo	12	1488	3.5	1.5	2.5	3.4	1521	chrX	10550836	intron	spri -	chrX	10551596	intron	spri -	chrX	10552357	intron	spri -	chrX_12_10550001	chrX_10550001	1182-4H
2379	chrX	10686027	10686070	chrX	10691189	10691230	roo	15	5161	2.0	2.0	2.0	5.0	5203	chrX	10686027	intron	X11Lbeta +	chrX	10688628	intron	X11Lbeta +	chrX	10691230	intron	X11Lbeta +	chrX_15_10685001	chrX_10685001	1182-4H
2381	chrX	10772653	10772698	chrX	10772761	10772806	Tirant	21	104	8.5	5.5	7.0	2.6	153	chrX	10772653	intron	CG15211 +	chrX	10772730	intron	CG15211 +	chrX	10772806	intron	CG15211 +	chrX_21_10770001	chrX_10770001	1182-4H
2383	chrX	11095993	11096009	chrX	11103120	11103136	HMS-Beagle	5	7127	1.0	4.5	2.8	1.3	7143	chrX	11095993	intergenic	not near genes	chrX	11099564	intergenic	not near genes	chrX	11103136	intron	CG42249 +	chrX_5_11095001	chrX_11095001	1182-4H
2385	chrX	11184226	11184252	chrX	11189327	11189333	flea	6	5098	7.0	3.5	5.2	1.0	5107	chrX	11184226	intergenic	not near genes	chrX	11186780	intergenic	not near genes	chrX	11189333	intergenic	not near genes	chrX_6_11185001	chrX_11185001	1182-4H
2389	chrX	11268564	11268591	chrX	11270056	11270109	hopper2	7	1508	1.5	5.0	3.2	1.7	1545	chrX	11268564	intron	CG44422 -	chrX	11269336	intron	CG44422 -	chrX	11270109	intron	CG44422 -	chrX_7_11265001	chrX_11265001	1182-4H
2392	chrX	11535029	11535046	chrX	11541524	11541541	Burdock	6	6495	5.0	3.0	4.0	1.2	6512	chrX	11535029	intron	Drak +	chrX	11538285	intron	Drak +	chrX	11541541	intron	Drak +	chrX_6_11535001	chrX_11535001	1182-4H
2393	chrX	11633410	11633446	chrX	11640489	11640524	297	10	7078	2.0	3.5	2.8	2.6	7114	chrX	11633410	intron	Ptp10D +	chrX	11636967	intron	Ptp10D +	chrX	11640524	intron	Ptp10D +	chrX_10_11635001	chrX_11635001	1182-4H
2394	chrX	11645092	11645118	chrX	11648287	11648313	NOF	6	3194	3.0	1.0	2.0	2.0	3221	chrX	11645092	intron	Ptp10D +	chrX	11646702	intron	Ptp10D +	chrX	11648313	intron	Ptp10D +	chrX_6_11645001	chrX_11645001	1182-4H
2404	chrX	12168119	12168152	chrX	12173586	12173619	I-element	8	5467	6.0	7.0	6.5	1.1	5500	chrX	12168119	intron	Ten-a +	chrX	12170869	intron	Ten-a +	chrX	12173619	intron	Ten-a +	chrX_8_12170001	chrX_12170001	1182-4H
2408	chrX	12381856	12381903	chrX	12385783	12385788	flea	4	3916	2.5	3.0	2.8	1.1	3932	chrX	12381856	intergenic	not near genes	chrX	12383822	intergenic	not near genes	chrX	12385788	intergenic	not near genes	chrX_4_12380001	chrX_12380001	1182-4H
2415	chrX	12930571	12930604	chrX	12937712	12937745	HMS-Beagle	8	7141	0.5	8.0	4.2	1.5	7174	chrX	12930571	intron	fne +	chrX	12934158	intron	fne +	chrX	12937745	intron	fne +	chrX_8_12930001	chrX_12930001	1182-4H
2423	chrX	13401479	13401519	chrX	13401856	13401896	jockey	7	376	1.0	4.5	2.8	1.8	417	chrX	13401479	intergenic	CG1673 +,CG12725 -	chrX	13401688	intergenic	CG12725 -,CG1673 +	chrX	13401896	3` UTR	CG12725 -	chrX_7_13400001	chrX_13400001	1182-4H
2424	chrX	13402999	13403039	chrX	13403151	13403191	X-element	4	152	1.0	3.5	2.2	1.2	192	chrX	13402999	intergenic	CG12725 -	chrX	13403095	intergenic	CG12725 -	chrX	13403191	intergenic	CG12725 -	chrX_4_13400001	chrX_13400001	1182-4H
2434	chrX	13937959	13938001	chrX	13941255	13941297	I-element	5	3295	2.5	1.0	1.8	1.8	3338	chrX	13937959	intron	mamo -	chrX	13939628	intron	mamo -	chrX	13941297	intron	mamo -	chrX_5_13935001	chrX_13935001	1182-4H
2436	chrX	14104998	14105051	chrX	14114174	14114197	roo	11	9173	4.5	7.0	5.8	1.6	9199	chrX	14104998	intergenic	not near genes	chrX	14109598	intergenic	not near genes	chrX	14114197	5` UTR	CR44657 +	chrX_11_14105001	chrX_14105001	1182-4H
2445	chrX	14416299	14416330	chrX	14421091	14421117	F-element	8	4791	3.0	3.0	3.0	2.0	4818	chrX	14416299	intron	dpr8 +	chrX	14418708	intron	dpr8 +	chrX	14421117	intron	dpr8 +	chrX_8_14415001	chrX_14415001	1182-4H
2449	chrX	14636448	14636482	chrX	14641914	14641948	I-element	7	5466	2.0	3.5	2.8	1.8	5500	chrX	14636448	intron	NetA -	chrX	14639198	intron	NetA -	chrX	14641948	intron	NetA -	chrX_7_14635001	chrX_14635001	1182-4H
2451	chrX	14778042	14778052	chrX	14782828	14782874	Doc	4	4810	5.5	6.5	6.0	0.6	4832	chrX	14778042	intergenic	CG5347 +	chrX	14780458	intergenic	not near genes	chrX	14782874	intergenic	Ag5r2 -	chrX_4_14780001	chrX_14780001	1182-4H
2454	chrX	14818740	14818794	chrX	14823969	14824023	copia	9	5229	4.0	2.5	3.2	2.1	5283	chrX	14818740	intron	rut -	chrX	14821382	intron	rut -	chrX	14824023	intron	rut -	chrX_9_14820001	chrX_14820001	1182-4H
2456	chrX	14936843	14936875	chrX	14946122	14946157	roo	4	9281	4.0	3.5	3.8	0.8	9314	chrX	14936843	intron	pdgy -	chrX	14941500	intron	pdgy -	chrX	14946157	intron	pdgy -	chrX_4_14940001	chrX_14940001	1182-4H
2463	chrX	15273692	15273729	chrX	15274869	15274921	1360	14	1186	7.0	5.0	6.0	2.0	1229	chrX	15273692	intergenic	not near genes	chrX	15274306	intergenic	not near genes	chrX	15274921	intergenic	not near genes	chrX_14_15270001	chrX_15270001	1182-4H
2464	chrX	15413034	15413078	chrX	15417361	15417398	Juan	11	4322	9.5	5.0	7.2	1.3	4364	chrX	15413034	intron	Cngl -	chrX	15415216	intron	Cngl -	chrX	15417398	intron	Cngl -	chrX_11_15415001	chrX_15415001	1182-4H
2465	chrX	15421898	15421935	chrX	15423434	15423471	pogo	9	1536	4.0	2.0	3.0	2.2	1573	chrX	15421898	intron	Cngl -	chrX	15422684	intron	Cngl -	chrX	15423471	intron	Cngl -	chrX_9_15420001	chrX_15420001	1182-4H
2466	chrX	15435688	15435704	chrX	15436146	15436162	rover	7	458	1.5	6.0	3.8	1.5	474	chrX	15435688	intron	Cngl -	chrX	15435925	intron	Cngl -	chrX	15436162	intron	Cngl -	chrX_7_15435001	chrX_15435001	1182-4H
2469	chrX	16222761	16222784	chrX	16231136	16231159	roo	5	8375	2.5	2.0	2.2	1.6	8398	chrX	16222761	intergenic	not near genes	chrX	16226960	intergenic	not near genes	chrX	16231159	intergenic	not near genes	chrX_5_16225001	chrX_16225001	1182-4H
2472	chrX	16492626	16492675	chrX	16498228	16498277	mdg3	14	5602	1.5	7.0	4.2	2.7	5651	chrX	16492626	intron	para -	chrX	16495452	intron	para -	chrX	16498277	exon	para -	chrX_14_16495001	chrX_16495001	1182-4H
2478	chrX	16936002	16936015	chrX	16936445	16936457	jockey	4	443	1.5	5.0	3.2	1.0	455	chrX	16936002	intron	CG4928 +	chrX	16936230	intron	CG4928 +	chrX	16936457	intron	CG4928 +	chrX_4_16935001	chrX_16935001	1182-4H
2479	chrX	16936017	16936028	chrX	16936443	16936471	jockey	4	438	1.5	5.0	3.2	1.0	454	chrX	16936017	intron	CG4928 +	chrX	16936244	intron	CG4928 +	chrX	16936471	intron	CG4928 +	chrX_4_16935001	chrX_16935001	1182-4H
2485	chrX	17195186	17195233	chrX	17200295	17200342	flea	5	5109	1.5	3.5	2.5	1.4	5156	chrX	17195186	3` UTR	baz +	chrX	17197764	3` UTR	baz +	chrX	17200342	3` UTR	baz +	chrX_5_17195001	chrX_17195001	1182-4H
2496	chrX	17792929	17792981	chrX	17796252	17796304	flea	11	3322	1.0	3.5	2.2	3.4	3375	chrX	17792929	intron	OdsH +	chrX	17794616	intron	OdsH +	chrX	17796304	intron	OdsH +	chrX_11_17790001	chrX_17790001	1182-4H
2498	chrX	18194044	18194096	chrX	18194604	18194656	BS	20	556	4.5	1.5	3.0	5.0	612	chrX	18194044	intron	Frq2 +	chrX	18194350	intron	Frq2 +	chrX	18194656	intron	Frq2 +	chrX_20_18190001	chrX_18190001	1182-4H
2500	chrX	18429475	18429503	chrX	18434811	18434839	Transpac	7	5336	1.0	2.0	1.5	2.8	5364	chrX	18429475	intergenic	not near genes	chrX	18432157	intergenic	not near genes	chrX	18434839	intergenic	not near genes	chrX_7_18430001	chrX_18430001	1182-4H
2502	chrX	18555356	18555411	chrX	18556902	18556958	transib2	7	1546	1.5	3.5	2.5	2.0	1602	chrX	18555356	intron	Bx +	chrX	18556157	intron	Bx +	chrX	18556958	intron	Bx +	chrX_7_18555001	chrX_18555001	1182-4H
2506	chrX	18957064	18957088	chrX	18965744	18965778	roo	5	8686	2.0	1.5	1.8	1.8	8714	chrX	18957064	intron	CG43759 +	chrX	18961421	intron	CG43759 +	chrX	18965778	intron	CG43759 +	chrX_5_18960001	chrX_18960001	1182-4H
2511	chrX	19060390	19060432	chrX	19065199	19065241	Doc	9	4808	2.5	5.0	3.8	1.9	4851	chrX	19060390	intron	CG14190 +	chrX	19062816	intron	CG14190 +	chrX	19065241	intron	CG14190 +	chrX_9_19060001	chrX_19060001	1182-4H
2517	chrX	19136535	19136580	chrX	19143480	19143508	412	9	6934	4.0	2.5	3.2	2.1	6973	chrX	19136535	intergenic	not near genes	chrX	19140022	intergenic	not near genes	chrX	19143508	3` UTR	RhoGAP18B -	chrX_9_19140001	chrX_19140001	1182-4H
2520	chrX	19380139	19380179	chrX	19380405	19380445	pogo	9	265	1.5	1.5	1.5	3.6	306	chrX	19380139	intron	kek5 +	chrX	19380292	intron	kek5 +	chrX	19380445	intron	kek5 +	chrX_9_19380001	chrX_19380001	1182-4H
2523	chrX	19710049	19710096	chrX	19711860	19711907	S-element	23	1811	3.5	6.5	5.0	3.8	1858	chrX	19710049	intron	meso18E -	chrX	19710978	intron	meso18E -	chrX	19711907	intron	meso18E -	chrX_23_19710001	chrX_19710001	1182-4H
2537	chrX	20377326	20377339	chrX	20378813	20378831	hobo	5	1491	5.0	12.0	8.5	0.5	1505	chrX	20377326	intergenic	not near genes	chrX	20378078	intergenic	not near genes	chrX	20378831	intergenic	not near genes	chrX_5_20375001	chrX_20375001	1182-4H
2550	chrX	20940699	20940740	chrX	20942193	20942234	hobo	9	1494	6.0	2.0	4.0	1.8	1535	chrX	20940699	intergenic	not near genes	chrX	20941466	intergenic	not near genes	chrX	20942234	intergenic	not near genes	chrX_9_20940001	chrX_20940001	1182-4H
2552	chrX	20956980	20957011	chrX	20962430	20962478	I-element	4	5463	0.5	3.0	1.8	1.4	5498	chrX	20956980	intergenic	not near genes	chrX	20959729	intergenic	not near genes	chrX	20962478	intergenic	Ser6 -	chrX_4_20955001	chrX_20955001	1182-4H
2557	chrX	21061840	21061888	chrX	21062350	21062390	roo	6	508	3.0	4.0	3.5	1.3	550	chrX	21061840	intron	bves +	chrX	21062115	intron	bves +	chrX	21062390	intron,3` UTR	bves +,CG32512 -	chrX_6_21060001	chrX_21060001	1182-4H
2559	chrX	21086111	21086157	chrX	21087165	21087211	jockey	9	1054	3.0	2.5	2.8	2.4	1100	chrX	21086111	intergenic	not near genes	chrX	21086661	intergenic	not near genes	chrX	21087211	intergenic	not near genes	chrX_9_21085001	chrX_21085001	1182-4H
2568	chrX	21458703	21458718	chrX	21464159	21464179	Ivk	8	5458	3.0	2.5	2.8	2.1	5476	chrX	21458703	intergenic	not near genes	chrX	21461441	intergenic	not near genes	chrX	21464179	intergenic	not near genes	chrX_8_21460001	chrX_21460001	1182-4H
2582	chrX	22697479	22697517	chrX	22701796	22701839	Juan	13	4322	4.5	2.5	3.5	2.9	4360	chrX	22697479	intron	CR44997 +	chrX	22699659	intron	CR44997 +	chrX	22701839	intron	CR44997 +	chrX_13_22695001	chrX_22695001	1182-4H
2583	chrX	22771483	22771537	chrX	22774799	22774826	297	9	3310	1.0	3.0	2.0	3.0	3343	chrX	22771483	intron	CR44997 +	chrX	22773154	intron	CR44997 +	chrX	22774826	intron	CR44997 +	chrX_9_22770001	chrX_22770001	1182-4H
2585	chrX	22811988	22811998	chrX	22816785	22816795	F-element	5	4797	5.0	6.0	5.5	0.8	4807	chrX	22811988	intergenic	CG12446 -	chrX	22814392	intergenic	not near genes	chrX	22816795	intergenic	not near genes	chrX_5_22810001	chrX_22810001	1182-4H
2588	chrX	22967369	22967382	chrX	23154545	23154558	diver	4	187176	5.0	7.0	6.0	0.6	187189	chrX	22967369	intergenic	not near genes	chrX	23060964	intergenic	not near genes	chrX	23154558	intergenic	not near genes	chrX_4_23060001	chrX_23060001	1182-4H
2589	chrX	22987079	22987132	chrX	22989763	22989816	Burdock	9	2681	2.0	1.5	1.8	3.2	2737	chrX	22987079	intron,intron	stnA -,stnB -	chrX	22988448	intron,intron	stnA -,stnB -	chrX	22989816	intron,intron	stnA -,stnB -	chrX_9_22985001	chrX_22985001	1182-4H
2590	chrX	22996303	22996329	chrX	23003562	23003588	roo	7	7259	3.0	4.0	3.5	1.6	7285	chrX	22996303	intron,intron	stnA -,stnB -	chrX	22999946	intron,intron	stnA -,stnB -	chrX	23003588	intron,intron	stnA -,stnB -	chrX_7_22995001	chrX_22995001	1182-4H